BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780896|ref|YP_003065309.1| ABC transporter membrane
spanning protein (branched chain amino acid) [Candidatus Liberibacter
asiaticus str. psy62]
         (351 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|238060176|ref|ZP_04604885.1| inner-membrane translocator [Micromonospora sp. ATCC 39149]
 gi|237881987|gb|EEP70815.1| inner-membrane translocator [Micromonospora sp. ATCC 39149]
          Length = 643

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 81/360 (22%), Positives = 153/360 (42%), Gaps = 30/360 (8%)

Query: 7   RLNKYDKILCLLAVVYPL------------LLFLFLGATKSQKYIDSMGIQILIYVMFAW 54
           +  ++  I  L+ ++Y L            +   +     ++     +     ++V+ A 
Sbjct: 281 KQVRWAAIAALIVLLYILPNRWFYEYLGFPIGSEYFAFYTTRSDFAGVLFDTAVFVLLAV 340

Query: 55  GLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-----YGLSIWLLIPVSAMISGACGMI 109
           GL++VVG  GLL L     YA+GAY+  +L S              +P++ M++   G+I
Sbjct: 341 GLNVVVGFAGLLDLGYFGFYALGAYTVALLTSPESRLGTNWPWLAAVPIAVMVAMISGVI 400

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           +G P+L+ RGDYLAI TL  +E+ +    + + +  G+ GI                   
Sbjct: 401 LGGPTLRLRGDYLAIVTLGFAEMIRLYAARNEGVLQGQRGIPAIPHP--------PGTGS 452

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
              P   V+     Y++LL +  L   ++  L  + +  AW   R+++ A   +      
Sbjct: 453 DGKPLFGVVDARPYYWLLLTLILLVIVLVRNLANSRVGRAWVATREDEDAAEVMGVPTFK 512

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            KL AFA+ +A  G+ GA FA  +  I+ D F    +I+V++ VILGG  ++       A
Sbjct: 513 YKLWAFAIGAAVAGLTGAVFAGKQTFINSDQFVLESSILVLAAVILGGAGNIKGAIVGGA 572

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
           I   + E   G+       L+  +         +  + + ++++ R   ++  R  +   
Sbjct: 573 ITWYLPEWLRGV-----GDLVGVEFDAAEYRILVFGLVIIVMMIFRPQGIVPNRRRAAEF 627


>gi|114707716|ref|ZP_01440611.1| putative permease of ABC transporter (high-affinity branched-chain
           amino acid transport) [Fulvimarina pelagi HTCC2506]
 gi|114536960|gb|EAU40089.1| putative permease of ABC transporter (high-affinity branched-chain
           amino acid transport) [Fulvimarina pelagi HTCC2506]
          Length = 486

 Score =  169 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 103/341 (30%), Positives = 177/341 (51%), Gaps = 6/341 (1%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +L V   L + L     +  +Y+  + I IL YVM  WGL+IVVG  GLL L  V  Y
Sbjct: 133 VAMLIVAIFLPVLLDTFLPRQNRYLLDLSILILTYVMLGWGLNIVVGLAGLLDLGYVAFY 192

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GAYS+ +L + + L  W+ +P++ + +   G+++G P L+ RGDYLAI TL   EI +
Sbjct: 193 AVGAYSFALLSTNFDLGFWVCLPMAGLFAALWGIMLGFPVLRLRGDYLAIVTLAFGEIIR 252

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +L+ W   T G  G+    +    G            +F      +   +F+YY++L +
Sbjct: 253 VVLLNWYEFTGGPNGLLGIPKPTLFGLEFSRGDDGFAAYFGIDYDPIQRFVFLYYIILAL 312

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L+  + + +R+  +  AW  +R+++ A  +L    +  KLSAFA  + F G AG+FFA
Sbjct: 313 ALLTNFVTMRMRKLPVGRAWEALREDEIACRALGINTVNVKLSAFATGAMFGGFAGSFFA 372

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             +  ISP+ F F E+ I+++IV+LGG+ S   +  A+ ++IG +EL   +      ++ 
Sbjct: 373 TRQGFISPESFTFIESAIILAIVVLGGLGSQLGVVIASVVMIGGIELLRNLT--VLEAVF 430

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                       +  +A+  +++ +   L+  R PS F + 
Sbjct: 431 GAGFDPTQYRMLIFGLAMVAIMVWKPRGLISTRIPSVFYKE 471


>gi|218194347|gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indica Group]
          Length = 1860

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 93/320 (29%), Positives = 145/320 (45%), Gaps = 17/320 (5%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            +     L    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY   
Sbjct: 287 LMAAIALLFPFVATKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLA 346

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +     GL  W ++P+ A+++   G ++G P L+  GDYLAI TL   EI + +L  W  
Sbjct: 347 LGYQYLGLGFWAMLPLGALMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWMS 406

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIR--FFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           +T G  GI V     F     R              + Y   + ++ +        ++  
Sbjct: 407 LTGGPNGISVPAPTVFGLEFGRRAKDGGVPIHEFLGIDYNPNLKFIFIYAMLFLVVLLHR 466

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L R  I  AW  +R+++ A  SL    +  KLSAF + ++  G+AG FFA  +  ++P  
Sbjct: 467 LTRMPIGRAWEALREDEIACRSLGLNHVLVKLSAFMLGASTAGLAGVFFATYQGFVNPTS 526

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F F E+ ++++IV+LGGM S   +  A  +L    EL      Y                
Sbjct: 527 FTFFESALILAIVVLGGMGSTLGVVLAAFVLTVAPELLRSFAEY---------------R 571

Query: 321 TTLMVIALFLVILMRSHSLL 340
             L  + +  +++ R   L 
Sbjct: 572 VLLFGVLMVAMMIWRPRGLA 591



 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 49/155 (31%), Gaps = 1/155 (0%)

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                  T+ S +    F    V       ++L+      A +   ++RT +    R  +
Sbjct: 15  PRQQGIPTLLSGVFRLEFDGGVVQITYTKVFILVVSLLGMAILTYIIQRTRLGRICRATQ 74

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
            ++K    L           F + +A  G+AG     +       +  F   I   +  +
Sbjct: 75  QDRKMASILGINTDRVISLVFVIGAAMAGLAGVLITMNYGTFDFYV-GFIIGIKAFTAAV 133

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           LGG+ SL        +L        GM    +  +
Sbjct: 134 LGGIGSLPGAMLGGLLLGVAEAQFAGMVNSDYKDV 168


>gi|190893150|ref|YP_001979692.1| amino acid ABC transporter permease [Rhizobium etli CIAT 652]
 gi|190698429|gb|ACE92514.1| amino acid ABC transporter, permease protein [Rhizobium etli CIAT
           652]
 gi|327190934|gb|EGE57988.1| amino acid ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 463

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 135/347 (38%), Positives = 204/347 (58%), Gaps = 6/347 (1%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
             + K   L  V+YP+++   +GA  S K++D+ GIQILIYVM AWGL+IVVG  GLL L
Sbjct: 105 RHFLKFALLALVLYPVVIVALVGAQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDL 164

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
             V  YA+GAYSY +L S +GLS W+L+P+S  ++   G+I+G P L+ RGDYLAI TL 
Sbjct: 165 GYVAFYAVGAYSYALLSSYFGLSFWVLLPLSGTLAALWGVILGFPVLRLRGDYLAIVTLA 224

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMY 184
             EI + +LI W  +T G  GI    +    G           + F  P S   Y+IF++
Sbjct: 225 FGEIIRLVLINWTDVTKGTFGISSIPKATLFGIPFDATAGGFAKLFHLPMSSAYYKIFLF 284

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y++L +C L+A + + LRR  I  AW  +R+++ A  SL    +  KL+AFA  + F G 
Sbjct: 285 YLILALCMLTAYVTIRLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFGGF 344

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG+FFAA +  +SP+ F F E+ +V++IV+LGGM SL+ IA A  +++G  E    M+  
Sbjct: 345 AGSFFAARQGFVSPESFIFLESAVVLAIVVLGGMGSLTGIAIAAIVMVGGTEALREMD-- 402

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +  ++   D +  +    L  +A+ +V+L +    +  R P+ FL+ 
Sbjct: 403 FLKAVFGPDFTPELYRMLLFGLAMVVVMLFKPRGFVGSREPTAFLKE 449


>gi|6996600|emb|CAB75550.1| integral membrane protein [Rhizobium leguminosarum bv. viciae]
          Length = 462

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 130/334 (38%), Positives = 195/334 (58%), Gaps = 6/334 (1%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
           YP+++  F G   S  Y+D+ GIQILIYVM AWGL+IVVG  GLL L  V  YA+GAYSY
Sbjct: 117 YPMVVVAFKGPQGSLTYVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGYVAFYAVGAYSY 176

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +L S +GLS W+L+P+S + +   G+I+G P L+ RGDYLAI TL   EI + +LI W 
Sbjct: 177 ALLSSYFGLSFWVLLPLSGIFAALWGVILGFPVLRLRGDYLAIVTLAFGEIIRLVLINWT 236

Query: 142 PITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +T G  GI    +    G           + F  P S   Y+IF++Y++L +C L+A +
Sbjct: 237 EVTKGTFGISSIPKATLFGIPFDATAGGFAKLFHLPISSAYYKIFLFYLILALCMLTAYV 296

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +RR  I  AW  +R+++ A  SL    +  KL+AFA  + F G AG+FFAA +  +S
Sbjct: 297 TNSVRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFAGFAGSFFAARQGFVS 356

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F F E+ ++++IV+LGGM SL+ IA A  +++G  EL   M+  +   +   D +  
Sbjct: 357 PESFVFLESAVILAIVVLGGMGSLTGIAIAAIVMVGGTELLRSMD--FLKLIFGPDFTPE 414

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +    +  +A+ +V+L +    +  R P+ FL  
Sbjct: 415 LYRMLIFGLAMVVVMLFKPRGFVGSREPTAFLRE 448


>gi|30911168|gb|AAP41936.1| BraE [Rhizobium leguminosarum bv. trifolii]
          Length = 455

 Score =  162 bits (409), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 129/334 (38%), Positives = 194/334 (58%), Gaps = 6/334 (1%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
           YP+++  F G   S  Y+D+ GIQILIYVM AWGL+IVVG  GLL L  V  YA+GAYSY
Sbjct: 117 YPMVVVAFKGPQGSLTYVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGYVAFYAVGAYSY 176

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +L S +GLS W+L+P+S + +   G+I+G P L+ RGDYLAI TL   EI + +LI W 
Sbjct: 177 ALLSSYFGLSFWVLLPLSGIFAALWGVILGFPVLRLRGDYLAIVTLAFGEIIRLVLINWT 236

Query: 142 PITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +T G  GI    +    G           + F  P S   Y+ F++Y++L +C L+A +
Sbjct: 237 EVTKGTFGISSIPKATLFGIPFDATAGGFAKLFHLPISSAYYKNFLFYLILALCMLTAYV 296

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +RR  I  AW  +R+++ A  SL    +  KL+AFA  + F G AG+FFAA +  +S
Sbjct: 297 TNSVRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFAGFAGSFFAARQGFVS 356

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F F E+ ++++IV+LGGM SL+ IA A  +++G  EL   M+  +   +   D +  
Sbjct: 357 PESFVFLESAVILAIVVLGGMGSLTGIAIAAIVMVGGTELLRSMD--FLKLIFGPDFTPE 414

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +    +  +A+ +V+L +    +  R P+ FL  
Sbjct: 415 LYRMLIFGLAMVVVMLFKPRGFVGSREPTAFLRE 448


>gi|217969002|ref|YP_002354236.1| inner-membrane translocator [Thauera sp. MZ1T]
 gi|217506329|gb|ACK53340.1| inner-membrane translocator [Thauera sp. MZ1T]
          Length = 443

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 113/351 (32%), Positives = 176/351 (50%), Gaps = 23/351 (6%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R +   +++ +L  V               +Y+      +LIYVM  WGL++VVG  GLL
Sbjct: 94  RAHGAQRVVNVLGWVALGASIALPIVFSDNRYVVDTATTVLIYVMLGWGLNVVVGLAGLL 153

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L  V  YA+GAYSY +L +++G S W  +PVS  ++ + G+++G P L+ RGDYLAI T
Sbjct: 154 DLGYVAFYAVGAYSYALLSTQFGWSFWEALPVSGALAASFGILLGYPILRLRGDYLAIVT 213

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR--------SLIRFFRFPSSFVI 178
           L   EI + IL+ W   + G  GI    R  F G            +   FF    S + 
Sbjct: 214 LGFGEIIRIILVNWTEFSGGPNGISSIPRPSFFGLDFTRSAPEGGQTFSGFFGLEFSPMH 273

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
             IF+YY++L +  L+ + +  LR+  +  AW  +R+++ A  ++       KLSAFA+ 
Sbjct: 274 RLIFLYYLILVLALLTHAFVSRLRKLPVGRAWEALREDEIACQAMGMNTTNIKLSAFAIG 333

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           +   G AG FFAA +  ISP+ F F+E+ I+++IV+LGGM S   +  A  +L+ + E  
Sbjct: 334 AMLGGFAGVFFAARQGFISPESFTFTESAIILAIVVLGGMGSQMGVVLAATLLVLIPEFG 393

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
                Y                  L  +A+ L+++ R   LL  R P+  L
Sbjct: 394 RNFAEY---------------RMLLFGLAMVLIMVWRPGGLLSHREPTVRL 429


>gi|241206017|ref|YP_002977113.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240859907|gb|ACS57574.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 463

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 133/347 (38%), Positives = 201/347 (57%), Gaps = 6/347 (1%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
             + KI  +  ++YPL++    G   S  Y+D+ GIQILIYVM AWGL+IVVG  GLL L
Sbjct: 105 RHFLKIALIALLLYPLVVVAIKGPQGSLTYVDNFGIQILIYVMLAWGLNIVVGLAGLLDL 164

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
             V  YA+GAYSY +L S +GLS W+L+P+S + +   G+I+G P L+ RGDYLAI TL 
Sbjct: 165 GYVAFYAVGAYSYALLSSYFGLSFWVLLPLSGIFAALWGVILGFPVLRLRGDYLAIVTLA 224

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMY 184
             EI + +LI W  +T G  GI    +    G           + F  P S   Y+IF++
Sbjct: 225 FGEIIRLVLINWTDVTRGTFGISSIPKATLFGIPFDATAGGFAKLFHLPPSSAYYKIFLF 284

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y++L +C L+A + + LRR  I  AW  +R+++ A  SL    +  KL+AFA  + F G 
Sbjct: 285 YLILMLCMLTAYVTIRLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFAGF 344

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG+FFAA +  +SP+ F F E+ ++++IV+LGGM SL+ IA A  +++G  EL   M+  
Sbjct: 345 AGSFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLTGIAIAAIVMVGGTELLRSMD-- 402

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +   +   D +  +    +  +A+ +V+L +    +  R P+ FL  
Sbjct: 403 FLKLIFGPDFTPELYRMLIFGLAMVVVMLFKPRGFVGSREPTAFLRE 449


>gi|220921738|ref|YP_002497039.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219946344|gb|ACL56736.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 474

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 186/344 (54%), Gaps = 6/344 (1%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +   +A+ +PLL+ L  G     +Y   +GI IL YVM  WGL+IVVG  GLL L  V
Sbjct: 119 LPVFLGVALAFPLLVVLGTGGLSESRYWVDLGILILTYVMLGWGLNIVVGLAGLLDLGYV 178

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             YA+GAY+Y +L + + LS W+ +P++ + +   GMI+G P L+ RGDYLAI TL   E
Sbjct: 179 AFYAVGAYTYALLSTTFDLSFWICLPLAGLFAACWGMILGFPVLRLRGDYLAIVTLAFGE 238

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMYYVL 187
           I + +LI W  ++ G AG+    R+ F G             F      +   +F+YY++
Sbjct: 239 IIRLVLINWSDLSGGAAGVSSIPRVTFFGVPFTADEDGFAARFGITFDPMHRVVFLYYLI 298

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +  ++  + L LRR  +  AW  +R+++ A  SL       KL+AFA+ + F G+AG+
Sbjct: 299 LTLALVTNLVTLRLRRLPLGRAWEALREDEIACRSLGINTTNTKLTAFALGAMFGGIAGS 358

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
           FFA  +  +SP+ F F E+ I+++IV+LGGM S   +A A   ++G  EL   +   +  
Sbjct: 359 FFAVRQGFVSPESFNFLESAIILAIVVLGGMGSQIGVAIAAVAMVGGPELLRNLG--FLR 416

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           ++       +     L  +A+ L+++ R   L+  R PS  L+ 
Sbjct: 417 AVFGEGFDPSEYRLLLFGLAMVLMMIWRPRGLISERAPSVVLKE 460


>gi|116253490|ref|YP_769328.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115258138|emb|CAK09239.1| transmembrane component of a broad range amino acid ABC transporter
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 463

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 132/347 (38%), Positives = 201/347 (57%), Gaps = 6/347 (1%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
             + KI  +  ++YP+++    G   S  Y+D+ GIQILIYVM AWGL+IVVG  GLL L
Sbjct: 105 RHFLKIALIALLLYPMVVVAIKGPQGSLTYVDNFGIQILIYVMLAWGLNIVVGLAGLLDL 164

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
             V  YA+GAYSY +L S +GLS W+L+P+S + +   G+I+G P L+ RGDYLAI TL 
Sbjct: 165 GYVAFYAVGAYSYALLSSYFGLSFWVLLPLSGIFAALWGVILGFPVLRLRGDYLAIVTLA 224

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMY 184
             EI + +LI W  +T G  GI    +    G           + F  P S   Y+IF++
Sbjct: 225 FGEIIRLVLINWTDVTKGTFGISSIPKATLFGIPFDATAGGFAKLFHLPISSAYYKIFLF 284

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y++L +C L+A + + LRR  I  AW  +R+++ A  SL    +  KL+AFA  + F G 
Sbjct: 285 YLILALCMLTAYVTIRLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFAGF 344

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG+FFAA +  +SP+ F F E+ ++++IV+LGGM SL+ IA A  +++G  EL   M+  
Sbjct: 345 AGSFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLTGIAIAAIVMVGGTELLREMS-- 402

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +   +   D +  +    +  +A+ +V+L +    +  R P+ FL  
Sbjct: 403 FLKLIFGPDFTPELYRMLIFGLAMVVVMLFKPRGFVGSREPTAFLRE 449


>gi|262198563|ref|YP_003269772.1| inner-membrane translocator [Haliangium ochraceum DSM 14365]
 gi|262081910|gb|ACY17879.1| inner-membrane translocator [Haliangium ochraceum DSM 14365]
          Length = 463

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 113/345 (32%), Positives = 174/345 (50%), Gaps = 23/345 (6%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
           K+  +  V+   L         + +Y+  +   +L Y+M  WGL+IVVG  GLL L  V 
Sbjct: 119 KLPVIAGVLGVALAAGLPLMPFADRYVVDVATLVLTYIMLGWGLNIVVGLAGLLDLGYVA 178

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            YA+GAYSY +L   + +S W  +P++ + +   G+++G P L+ RGDYLAI TL   EI
Sbjct: 179 FYAVGAYSYALLAFYFDMSFWACLPLAGVFAATFGVLLGFPVLRLRGDYLAIVTLGFGEI 238

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMY 184
            + +L+ W   T G  GI    R  F G            +   FF    S +   +F+Y
Sbjct: 239 IRVVLLNWTEFTRGPDGISGIPRPSFFGLPFSRRVPEGGDTFHTFFGLDYSSMHRIVFLY 298

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y++L +  L+ + IL +R+  +  AW  +R+++ A  SL       KLSAFA+ + F G 
Sbjct: 299 YLILVLALLTNAFILRVRKLPLGRAWEALREDEIACRSLGIDPTRTKLSAFALGAMFGGF 358

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGAFF+A +  ISP+ F F E+ ++++IV+LGGM S   +  A  +LIG  E   G+  Y
Sbjct: 359 AGAFFSARQGFISPESFTFIESAVILAIVVLGGMGSQLGVVIAAVLLIGGTEWFRGLAEY 418

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
                                 A+ L+++ R   LL  R P+  L
Sbjct: 419 ---------------RMLGFGAAMVLIMVWRPRGLLAHRKPTVTL 448


>gi|86358923|ref|YP_470815.1| amino acid ABC transporter, permease protein [Rhizobium etli CFN
           42]
 gi|86283025|gb|ABC92088.1| amino acid ABC transporter, permease protein [Rhizobium etli CFN
           42]
          Length = 463

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 133/346 (38%), Positives = 205/346 (59%), Gaps = 6/346 (1%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
             + KI  +  ++YP+++   +GA  S K++D+ GIQILIYVM AWGL+IVVG  GLL L
Sbjct: 105 RHFLKIALIALLLYPMVIVALVGAQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDL 164

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
             V  YA+GAYSY +L S +GLS W+L+P+S +++   G+I+G P L+ RGDYLAI TL 
Sbjct: 165 GYVAFYAVGAYSYALLSSYFGLSFWVLLPLSGILAALWGLILGFPVLRLRGDYLAIVTLA 224

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMY 184
             EI + +LI W  +T G  GI    +    G           + F    S   Y+IF++
Sbjct: 225 FGEIIRLVLINWTDVTRGTFGISSIPKATLFGIPFDATAGGFAKLFHLSMSSAYYKIFLF 284

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y++L +C L+A + + LRR  I  AW  +R+++ A  SL    +  KL+AFA  + F G 
Sbjct: 285 YLILALCMLTAYVTIRLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFGGF 344

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG+FFAA +  +SP+ F F E+ +V++IV+LGGM SL+ IA A  +++G  E    M+  
Sbjct: 345 AGSFFAARQGFVSPESFIFLESAVVLAIVVLGGMGSLTGIAIAAIVMVGGTEALREMD-- 402

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           +  ++   D +  +    L  +A+ +V+L +    +  R P+ FL+
Sbjct: 403 FLKAVFGPDFTPELYRMLLFGLAMVVVMLFKPRGFVGSREPTAFLK 448


>gi|163794737|ref|ZP_02188707.1| inner-membrane translocator [alpha proteobacterium BAL199]
 gi|159180010|gb|EDP64535.1| inner-membrane translocator [alpha proteobacterium BAL199]
          Length = 517

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 117/350 (33%), Positives = 177/350 (50%), Gaps = 24/350 (6%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           ++  K++ + A +  +          S +Y+  +   I+ YVM  WGL+I+VG  GLL L
Sbjct: 159 DQVRKLVKVFAAIAVVFALTLPFLPFSNRYVIDVATLIVTYVMLGWGLNIIVGYAGLLDL 218

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
             V  YA+GAYSY +     G+S WL +P + +++ + G+I+G P L+ RGDY AI TL 
Sbjct: 219 GFVAFYAVGAYSYALAAQHLGISFWLALPFAGLLAASFGLILGFPVLRLRGDYFAIVTLG 278

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGT---------TVRSLIRFFRFPSSFVIY 179
             EI + +LI W  +TNG  GI    R  F G           +     +F    S    
Sbjct: 279 FGEIVRIVLINWYDVTNGPDGISGIPRPDFFGLASMTRNGSDGLPPFHEYFGLEYSSEHR 338

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
            IF+YY+++ M  L A   + +R+  I  AW  +R++  A  SL       KL+AF +S+
Sbjct: 339 IIFLYYLIVAMAALVALFTVRIRKLPIGRAWEALREDDIACASLGINRTTIKLAAFGISA 398

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A+ G AGAFFA  +  ISP+ F F E+ I+++IV++GGM SL  IA A  +LIG+ E+  
Sbjct: 399 AWGGFAGAFFATRQGFISPESFTFIESAIILAIVVMGGMGSLVGIAIAALLLIGLPEVFR 458

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
            +  Y                       L ++++ R   LL  R PS  L
Sbjct: 459 DLAEY---------------RMVAFGAGLVMIMIWRPRGLLSHREPSVLL 493


>gi|209550647|ref|YP_002282564.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209536403|gb|ACI56338.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 463

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 130/346 (37%), Positives = 201/346 (58%), Gaps = 6/346 (1%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
             + KI  +  ++YP+++    G   S  Y+D+ GIQILIYVM AWGL+IVVG  GLL L
Sbjct: 105 RHFLKIALIALLLYPMVVVAIKGPQGSLTYVDNFGIQILIYVMLAWGLNIVVGLAGLLDL 164

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
             V  YA+GAYSY +L S +GLS W+L+P+S + +   G+I+G P L+ RGDYLAI TL 
Sbjct: 165 GYVAFYAVGAYSYALLSSHFGLSFWVLLPLSGIFAALWGVILGFPVLRLRGDYLAIVTLA 224

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMY 184
             EI + +LI W  +T G  GI    ++   G           + F    S   Y+IF++
Sbjct: 225 FGEIIRLVLINWTDVTKGTFGISSIPKVTLFGIPFDATAGGFAKLFHLSMSSAYYKIFLF 284

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y++L +C L+A + + LRR  I  AW  +R+++ A  SL    +  KL+AFA  + F G 
Sbjct: 285 YLILALCMLTAYVTIQLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFAGF 344

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG+FFAA +  +SP+ F F E+ ++++IV+LGGM SL+ IA A  +++G  EL   M+  
Sbjct: 345 AGSFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLTGIAIAAIVMVGGTELLREMD-- 402

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           +   +     +  +    +  +A+ +V+L +    +  R P+ FL+
Sbjct: 403 FLKVIFGPTFTPELYRMLIFGLAMVVVMLFKPRGFVGSREPTAFLK 448


>gi|217978236|ref|YP_002362383.1| inner-membrane translocator [Methylocella silvestris BL2]
 gi|217503612|gb|ACK51021.1| inner-membrane translocator [Methylocella silvestris BL2]
          Length = 456

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 122/350 (34%), Positives = 198/350 (56%), Gaps = 7/350 (2%)

Query: 7   RLNKYDKILCLLAVV-YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           RL +Y   + +LA++ +PL++   LG   +QK+ID+ G+QIL+YV+  WGL+IVVG  GL
Sbjct: 95  RLARYAGAVGILALIAFPLVMVALLGPAGAQKWIDNFGVQILLYVLLGWGLNIVVGLAGL 154

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           L L  V  YA+GAY+Y +L + +G S WL +PV+ +++   G+ +GLP L+ RGDYLAI 
Sbjct: 155 LDLGYVAFYAVGAYAYALLATHFGWSFWLCLPVAGLLAAGFGVALGLPVLRLRGDYLAIV 214

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEI 181
           T+   EI + +L  W  +TNG AGI    R+ F G             F    + V   I
Sbjct: 215 TMAFGEIIRLVLTNWTALTNGDAGISSIPRITFFGWPFIAGPNGFAALFGLKFAPVHRLI 274

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
           F++Y++L +      +   LR+  +  A+  +R+++ A  SL    +  KL+AFA+ ++ 
Sbjct: 275 FLFYLILALALCVNYLTRRLRKAPLGRAFEALREDEIACRSLGVDTVATKLTAFALGASI 334

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            GMAGA FAA ++ +SP  F F E+  ++++V+LGG  S   +A A  ++IG  E+   +
Sbjct: 335 AGMAGALFAARQNFVSPTSFTFMESATILALVVLGGAGSQLGVALAAIVIIGGSEILREL 394

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +      +             ++ IA+  ++  R   L+ LRTPS FL++
Sbjct: 395 DG--LKQIFGPAFDPTQYRMLIVGIAMVGMMNWRPRGLIALRTPSIFLKK 442


>gi|222149578|ref|YP_002550535.1| ABC transporter membrane spanning protein (branched chain amino
           acid) [Agrobacterium vitis S4]
 gi|221736560|gb|ACM37523.1| ABC transporter membrane spanning protein (branched chain amino
           acid) [Agrobacterium vitis S4]
          Length = 463

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 133/345 (38%), Positives = 203/345 (58%), Gaps = 6/345 (1%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + KI  +  ++YP ++   +G   S KY+D+ GIQILIYVM AWGL+IVVG  GLL L  
Sbjct: 107 FLKIALVALILYPPVILFLVGTQGSLKYVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGY 166

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           V  YA+GAYSY +L   +GLS WLL+P+S +++   G+++G P L+ RGDYLAI TL   
Sbjct: 167 VAFYAVGAYSYALLSQHFGLSFWLLLPISGILAAFWGIMLGFPVLRLRGDYLAIVTLAFG 226

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMYYV 186
           EI + +LI W  +T G  G+    +    G           + F  P S   Y+IF++Y+
Sbjct: 227 EIIRLVLINWTDVTQGTFGVSGIPKATLFGIPFDASAHGFAKTFGLPMSSAYYKIFLFYL 286

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            LG+C L+A + + LRR  I  AW  +R+++ A  SL    +  KL+AFA+ + F G AG
Sbjct: 287 ALGLCMLTAYVTIRLRRMPIGRAWEALREDEIACRSLGIDTVKTKLTAFAIGAMFGGFAG 346

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +FFAA +  +SP+ F F E+ ++++IV+LGGM SL+ IA A  +++G  EL   M   + 
Sbjct: 347 SFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLTGIAVAAIVMVGGTELLREME--FL 404

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             +   D +  +    L  +A+ +V+L +    +  R P+ FL+ 
Sbjct: 405 KHVFGPDFTPELYRMLLFGLAMIVVMLFKPRGFVGSREPTAFLKE 449


>gi|258592151|emb|CBE68456.1| ABC tranpsorter, permease protein (N-ter) and ATP-binding protein
           (C-ter); putative branched-chain amino acid transport
           protein [NC10 bacterium 'Dutch sediment']
          Length = 696

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 100/345 (28%), Positives = 166/345 (48%), Gaps = 36/345 (10%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R+++    L   A    +            +Y   +  Q+ IY   A GL+IVVG  GLL
Sbjct: 91  RIDRRLLYLMAFAAAVVI-------PLGLNRYYIDVLTQVGIYATLALGLNIVVGLAGLL 143

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           +L  +  YA+GAY+Y +L +R  +S W ++P+  +++   G+++G P+L+ RGDYLAI T
Sbjct: 144 NLGYIAFYAVGAYAYGLLATRADVSFWQVLPLGGVLAAVFGVLLGFPALRLRGDYLAIVT 203

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   E+ + +L  W  +T G  GI    R    G T                  I  YY+
Sbjct: 204 LGFGEMIRIVLNNWDSLTGGPNGIIGITRPSLFGFTFSH--------------PIHYYYL 249

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +  L+   +  L ++ +  AW  +RD++ A  ++   ++  KL AF + + + G+AG
Sbjct: 250 ILAVVLLTIFSVDRLNQSRLGRAWTAMRDDEVAAEAIGIDLVKTKLLAFGLGATWAGLAG 309

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
            FFA+    ISP+ F F E++IV+ +V LGGM S+  +    A+L+ + EL      Y  
Sbjct: 310 VFFASKMTFISPESFTFFESVIVLCMVTLGGMGSIPGVILGAALLLILPELMRQFALY-- 367

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                           +   A+  +++MR   LL  R  +  L R
Sbjct: 368 -------------RMLVFGAAMVGMMVMRPKGLLTARRRTVPLWR 399


>gi|90420912|ref|ZP_01228817.1| permease componenet of ABC branched-chain amino acid transporter
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90334887|gb|EAS48659.1| permease componenet of ABC branched-chain amino acid transporter
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 486

 Score =  155 bits (391), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 105/329 (31%), Positives = 173/329 (52%), Gaps = 6/329 (1%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L        +Y+  + I IL YVM  WGL+IVVG  GLL L  V  YA+GAYS+ +L +
Sbjct: 145 LLATLVPSQNRYLLDLAILILTYVMLGWGLNIVVGLAGLLDLGYVAFYAVGAYSFALLST 204

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +GL  W+ +P++ + +   G+++G P L+ RGDYLAI TL   EI + +L+ W   T G
Sbjct: 205 NFGLGFWVCLPMAGLFAAMWGVMLGFPVLRLRGDYLAIVTLAFGEIIRIVLLNWYEFTGG 264

Query: 147 KAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
             G+    +    G        S   +F      V   +F+YY++L +  ++  + L LR
Sbjct: 265 PNGLLGIPKPTLFGLEFNRGDNSFAEYFNLEYDTVQRFVFLYYIILALALITNFVTLRLR 324

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           +  +  AW  +R+++ A  SL       KL+AFA  + F G AGAFFA  +  ISP+ F 
Sbjct: 325 KLPVGRAWEALREDEIACRSLGINTTNVKLTAFATGAMFGGFAGAFFATRQGFISPESFT 384

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F E+ I+++IV+LGG+ S   +  A+ ++IG +EL   +      ++   D         
Sbjct: 385 FIESAIILAIVVLGGLGSQLGVVIASVVMIGGIELLRNLT--ILQAVFGSDFDPTQYRML 442

Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +  +A+  +++ +   L+  R+PS+  + 
Sbjct: 443 IFGLAMVAIMVWKPRGLISSRSPSDVYKE 471


>gi|110635652|ref|YP_675860.1| inner-membrane translocator [Mesorhizobium sp. BNC1]
 gi|110286636|gb|ABG64695.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Chelativorans sp. BNC1]
          Length = 484

 Score =  155 bits (391), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 103/340 (30%), Positives = 170/340 (50%), Gaps = 6/340 (1%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L      L  F         +    + I I+ Y+M  WGL+IVVG  GLL L  V  YA
Sbjct: 132 ALFIFALALPFFFTTFFPGRDRQFIDLAILIMTYIMLGWGLNIVVGLAGLLDLGYVAFYA 191

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAYS+ +L   + +  W  +P++ +++   G+I+G P L+ RGDYLAI TL   EI + 
Sbjct: 192 VGAYSFALLAQHFEIGFWAALPLAGLLAAFWGIILGFPVLRLRGDYLAIVTLAFGEIIRI 251

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +L+ W   T G  GI    +  F G  +         FF      +   I++YY++  + 
Sbjct: 252 VLLNWYSFTGGPNGISGIPKPTFFGLELGRGDDGFAAFFGIEYDPIQRFIYLYYIIFALA 311

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+  + L LR+  I  AW  +R+++ A  SL       KL+AFA+ + F G AG+FFA 
Sbjct: 312 LLTNLVTLRLRKLPIGRAWEALREDEIACRSLGINTRNTKLTAFAIGAMFGGFAGSFFAT 371

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  ISP+ F F E+ ++++IV+LGG+ S   I  A+ ++IG +E+   +   +   +  
Sbjct: 372 RQGFISPESFTFIESAMILAIVVLGGLGSQLGIVIASIVMIGGIEMLRNLG--FLTQIFG 429

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                      +  +A+ L+++ +   L+  R P+  L  
Sbjct: 430 PGFDPVQYRMLIFGLAMVLIMVWKPRGLVTTREPTAALRE 469


>gi|153008447|ref|YP_001369662.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
 gi|151560335|gb|ABS13833.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
          Length = 460

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 129/345 (37%), Positives = 199/345 (57%), Gaps = 6/345 (1%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + ++      VYP+L+  FLG   S K++D+ G+QILIYVM AWGL+IVVG  GLL L  
Sbjct: 104 FSRLGVAFLFVYPVLIVTFLGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 163

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           V  YA+GAYSY +L + +GLS W+L+P++ +++   G+I+G P L+ RGDYLAI TL   
Sbjct: 164 VAFYAVGAYSYALLSAYFGLSFWMLLPIAGILAATWGVILGFPVLRLRGDYLAIVTLAFG 223

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186
           EI + +LI W  +T G  G+    +  F G             F    S   Y+ F+YYV
Sbjct: 224 EIIRLVLINWTDVTRGTFGVSGIAKATFFGLPFNASKDGFAAHFGLTFSAAHYKFFLYYV 283

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +  L+A + + LRR  +  AW  +R+++ A  SL       KL+AFA  + F G AG
Sbjct: 284 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 343

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +FFAA +  +SP+ F F E+ ++++IV+LGGM SL  IA A  ++IG  E+   M+  + 
Sbjct: 344 SFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 401

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            ++   D +  +    +  +A+ +V++ +    +  R PS FL  
Sbjct: 402 KAIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFLHE 446


>gi|15966237|ref|NP_386590.1| high-affinity branched-chain amino acid transport permease ABC
           transporter protein [Sinorhizobium meliloti 1021]
 gi|307308588|ref|ZP_07588290.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
 gi|307317366|ref|ZP_07596806.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|15075507|emb|CAC47063.1| ABC-type branched-chain amino acid transport system, permease
           component [Sinorhizobium meliloti 1021]
 gi|306896955|gb|EFN27701.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|306900988|gb|EFN31597.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
          Length = 461

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 125/345 (36%), Positives = 199/345 (57%), Gaps = 6/345 (1%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + KI  +L ++YP ++   +G   S K++D+ GIQILIYVM AWGL+IVVG  GLL L  
Sbjct: 105 WSKIAVILLLIYPPVIVALVGVQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGY 164

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           V  YA+GAYSY +L S +GLS W+L+P++ +++   G+++G P L+ RGDYLAI TL   
Sbjct: 165 VAFYAVGAYSYALLSSYFGLSFWVLLPIAGLLAACWGVVLGFPVLRLRGDYLAIVTLAFG 224

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186
           EI + +LI W  +T G  G+    +    G                P S   Y+IF++Y+
Sbjct: 225 EIIRLVLINWTEVTKGTFGVSGIAKATLFGIKFDATKDGFAAMMGLPMSSAYYKIFLFYL 284

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +LG+  L+A + + LRR  I  AW  +R+++ A  SL    +  KL+AFA  + F G AG
Sbjct: 285 ILGLALLTAFVTIRLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFGGFAG 344

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +FFA  +  +SP+ F F E+ ++++IV+LGGM SL+ IA A  ++IG  E+   +   + 
Sbjct: 345 SFFAVRQGFVSPESFVFLESAVILAIVVLGGMGSLTGIAIAAVVMIGGTEILRELT--FL 402

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             +     +  +    +  +A+ +V++ +    +  R P+ FL  
Sbjct: 403 KMIFGPTFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPTAFLRE 447


>gi|239832869|ref|ZP_04681198.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301]
 gi|239825136|gb|EEQ96704.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301]
          Length = 460

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 130/347 (37%), Positives = 199/347 (57%), Gaps = 6/347 (1%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
             + ++      VYP+L+  FLG   S K++D+ G+QILIYVM AWGL+IVVG  GLL L
Sbjct: 102 RHFSRLGVAFLFVYPILIVAFLGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDL 161

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
             V  YA+GAYSY +L S +GLS W+L+P++ +++   G+I+G P L+ RGDYLAI TL 
Sbjct: 162 GYVAFYAVGAYSYALLSSYFGLSFWMLLPIAGILAATWGVILGFPVLRLRGDYLAIVTLA 221

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMY 184
             EI + +LI W  +T G  G+    +  F G            +F    S   Y+ F+Y
Sbjct: 222 FGEIIRLVLINWTDVTRGTFGVSGIAKATFFGLPFNASKDGFAAYFGLTFSAAHYKFFLY 281

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           YV+L +  L+A + + LRR  +  AW  +R+++ A  SL       KL+AFA  + F G 
Sbjct: 282 YVILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGF 341

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG+FFAA +  +SP+ F F E+ ++++IV+LGGM SL  IA A  ++IG  E+   M   
Sbjct: 342 AGSFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMG-- 399

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +  ++   D +  +    +  +A+ +V++ +    +  R PS FL  
Sbjct: 400 FLKAVFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFLHE 446


>gi|312113602|ref|YP_004011198.1| inner-membrane translocator [Rhodomicrobium vannielii ATCC 17100]
 gi|311218731|gb|ADP70099.1| inner-membrane translocator [Rhodomicrobium vannielii ATCC 17100]
          Length = 532

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 117/327 (35%), Positives = 176/327 (53%), Gaps = 20/327 (6%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
             L A  SQ+Y      QILIYVM  WGL+IVVG  GLL L  V  YA+GAY+Y ++ ++
Sbjct: 205 PMLTAGPSQRYAIDTATQILIYVMLGWGLNIVVGLAGLLDLGYVAFYAVGAYTYALISTQ 264

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
           +G S W+ +P++   +   G+ +G P L+ RGDYLAI T+   EI + +L+ W+ +T G 
Sbjct: 265 FGWSFWVCLPLAGFFAALWGITLGFPVLRLRGDYLAIVTMAFGEIVRIVLLNWQSLTGGP 324

Query: 148 AGIYVADRLYFLGTTV-----RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
            GI    +L F G         +    F      +   +F+YYV+L +  L+  I L LR
Sbjct: 325 NGINKIPKLTFFGLPFERTGDGTFASVFGLKFDPLHRMLFLYYVILALALLTNFITLRLR 384

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R  I  AW  +R+++ A  S+    +  KL+AFA+ + F G AG+FFAA +  ISP+ F 
Sbjct: 385 RLPIGRAWEALREDEIACRSVGINTVTTKLTAFAIGAMFGGFAGSFFAARQGFISPESFT 444

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F E+ +V++IV+LGG+ S   +  A  ILIG  E    +  +                  
Sbjct: 445 FMESALVLAIVVLGGLGSQLGVVIAAVILIGSAERFRDLEDF---------------RML 489

Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFL 349
           +  +++ LV++ R   L+  RTPS FL
Sbjct: 490 IFGLSMVLVMIWRPRGLMSGRTPSAFL 516


>gi|254719778|ref|ZP_05181589.1| inner-membrane translocator [Brucella sp. 83/13]
 gi|265984798|ref|ZP_06097533.1| inner-membrane translocator [Brucella sp. 83/13]
 gi|306839475|ref|ZP_07472283.1| inner-membrane translocator [Brucella sp. NF 2653]
 gi|264663390|gb|EEZ33651.1| inner-membrane translocator [Brucella sp. 83/13]
 gi|306405420|gb|EFM61691.1| inner-membrane translocator [Brucella sp. NF 2653]
          Length = 459

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 131/343 (38%), Positives = 197/343 (57%), Gaps = 6/343 (1%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + ++      VYP+L+   LG   S K++D+ G+QILIYVM AWGL+IVVG  GLL L  
Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           V  YA+GAYSY IL S +GLS W+L+P++ +++   G+I+G P L+ RGDYLAI TL   
Sbjct: 163 VAFYAVGAYSYAILSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186
           EI + +LI W  +T G  GI    +  F G             F    S   Y+ F+YYV
Sbjct: 223 EIIRLVLINWTDLTRGTFGISGIAKATFFGLPFNASKDGFAAHFGLTFSAAHYKFFLYYV 282

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +  L+A + + LRR  +  AW  +R+++ A  SL       KL+AFA  + F G AG
Sbjct: 283 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 342

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +FFAA +  +SP+ F F E+ ++++IV+LGGM SL  IA A  ++IG  E+   M+  + 
Sbjct: 343 SFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 400

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
             +   D +  +    +  +A+ +V++ +    +  R PS FL
Sbjct: 401 KIIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFL 443


>gi|289522970|ref|ZP_06439824.1| branched-chain amino acid ABC transporter, permease protein
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503513|gb|EFD24677.1| branched-chain amino acid ABC transporter, permease protein
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 589

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 82/323 (25%), Positives = 137/323 (42%), Gaps = 30/323 (9%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           ++         S  Y   +     +Y +    L+IV+G  GL  L     YAIGAY   I
Sbjct: 2   VIALFLAFPFFSNFYWIDVAFFFGVYALLGLSLNIVLGETGLFDLGHAAFYAIGAYVTAI 61

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ-NILIKWKP 142
           L + YG+ I  LIP+SA+ +G    I+  P +  RGDYL I T+ + EI +  ++     
Sbjct: 62  LNTLYGIPIVWLIPLSALCAGFFAYIVTSPIIHLRGDYLCIVTIGIGEIVRLALINNPFG 121

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  GI    R  F    + + +RF              Y+ +  +  +    ++ L+
Sbjct: 122 LTGGPNGITGIGRPSFGLFAIDTSMRF--------------YFYVWIILAIVILGLVRLQ 167

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+ I  AW  +R+++ A       +   KL +F + +A  G+AG  +A+    +SPD F 
Sbjct: 168 RSRIGRAWNYLREDEIAAEMSGIDVRHFKLLSFVLGAALAGVAGNIYASKLMIVSPDTFT 227

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F E+ ++  IV+LGG+ S+        I+    E+   +  Y                  
Sbjct: 228 FMESSMLFCIVMLGGLGSIPGSILGAGIITVFPEIFRVVANY---------------RML 272

Query: 323 LMVIALFLVILMRSHSLLRLRTP 345
               AL L ++ R   L   +  
Sbjct: 273 FFGGALVLAMIFRPGGLWPRKRE 295


>gi|317122640|ref|YP_004102643.1| ABC transporter [Thermaerobacter marianensis DSM 12885]
 gi|315592620|gb|ADU51916.1| ABC transporter related protein [Thermaerobacter marianensis DSM
           12885]
          Length = 897

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 68/325 (20%), Positives = 126/325 (38%), Gaps = 20/325 (6%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++     +LL+  L          S+ + I +Y+    GLS++ G  G +SL     Y +
Sbjct: 8   VIGAAVGILLWASLPYGVGDLLSLSVFVLIALYIPIVVGLSVLSGYTGQVSLGQAAFYGL 67

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY   IL +      WL IP +  ++G     +G P L  RG YL +ATL ++ I + +
Sbjct: 68  GAYLTAILSTHLDWKPWLSIPTAVALTGLIAYGIGRPILVLRGHYLVVATLGLNIIVEVL 127

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           + +   +T G +G+     L      +R                   YY    +   + +
Sbjct: 128 IRELHGLTGGPSGLSGIPPLAAGSMVLRGDR--------------AYYYAASLLAAGAVA 173

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               L R+ +  A + I  ++ A  +L       K   FA S+     +G  +A     +
Sbjct: 174 ASALLIRSRVGRALQAIATSETAAETLGIDAASYKARVFAWSAVLAAASGCLYAHYVGYL 233

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP  F F+ ++ ++ + ++GG+ SL      +AI + + E    +               
Sbjct: 234 SPSPFSFNFSVELLVMAVIGGLASLPGAVVGSAITVLLREQLRTIISGLAGGAGA----- 288

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 +  + L  V++     L  
Sbjct: 289 -EYEVVIYGLILAAVVIFAPDGLWP 312


>gi|256370195|ref|YP_003107706.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella microti CCM 4915]
 gi|256000358|gb|ACU48757.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella microti CCM 4915]
          Length = 459

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 130/343 (37%), Positives = 196/343 (57%), Gaps = 6/343 (1%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + ++      VYP+L+   LG   S K++D+ G+QILIYVM AWGL+IVVG  GLL L  
Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           V  YA+GAYSY IL S +GLS W+L+P++ +++   G+I+G P L+ RGDYLAI TL   
Sbjct: 163 VAFYAVGAYSYAILSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186
           EI + +LI W  +T G  GI    +  F G             F    S   Y+ F+YYV
Sbjct: 223 EIIRLVLINWTDLTRGTFGISGIAKATFFGLPFNASKDGFAAHFGLAFSAAHYKFFLYYV 282

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +  L+A + + LRR  +  AW  +R+++ A  SL       KL+AFA  + F G AG
Sbjct: 283 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 342

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +FFA  +  +SP+ F F E+ ++++IV+LGGM SL  IA A  ++IG  E+   M+  + 
Sbjct: 343 SFFATRQGFVSPESFVFLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 400

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
             +   D +  +    +  +A+ +V++ +    +  R PS FL
Sbjct: 401 KIIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFL 443


>gi|256114355|ref|ZP_05455088.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether]
 gi|265995655|ref|ZP_06108212.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether]
 gi|262766939|gb|EEZ12557.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether]
          Length = 459

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 131/343 (38%), Positives = 197/343 (57%), Gaps = 6/343 (1%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + ++      VYP+L+   LG   S K++D+ G+QILIYVM AWGL+IVVG  GLL L  
Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           V  YA+GAYSY IL S +GLS W+L+P++ +++   G+I+G P L+ RGDYLAI TL   
Sbjct: 163 VAFYAVGAYSYAILSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186
           EI + +LI W  +T G  GI    +  F G             F    S   Y+ F+YYV
Sbjct: 223 EIIRLVLINWTDLTRGTFGISGIAKATFFGLPFNASKDGFAAHFGLAFSAAHYKFFLYYV 282

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +  L+A + + LRR  +  AW  +R+++ A  SL       KL+AFA  + F G AG
Sbjct: 283 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 342

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +FFAA +  +SP+ F F E+ ++++IV+LGGM SL  IA A  ++IG  E+   M+  + 
Sbjct: 343 SFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 400

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
             +   D +  +    +  +A+ +V++ +    +  R PS FL
Sbjct: 401 KIIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFL 443


>gi|17986543|ref|NP_539177.1| high-affinity branched-chain amino acid transport system permease
           protein LIVM [Brucella melitensis bv. 1 str. 16M]
 gi|62290656|ref|YP_222449.1| branched-chain amino acid ABC transporter permease [Brucella
           abortus bv. 1 str. 9-941]
 gi|82700570|ref|YP_415144.1| inner-membrane translocator [Brucella melitensis biovar Abortus
           2308]
 gi|148559528|ref|YP_001259630.1| branched-chain amino acid ABC transporter permease [Brucella ovis
           ATCC 25840]
 gi|189024868|ref|YP_001935636.1| inner-membrane translocator [Brucella abortus S19]
 gi|225628347|ref|ZP_03786381.1| high-affinity branched-chain amino acid transport system permease
           protein LIVM [Brucella ceti str. Cudo]
 gi|225853236|ref|YP_002733469.1| inner-membrane translocator [Brucella melitensis ATCC 23457]
 gi|237816157|ref|ZP_04595152.1| high-affinity branched-chain amino acid transport system permease
           protein LIVM [Brucella abortus str. 2308 A]
 gi|254694436|ref|ZP_05156264.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya]
 gi|254698095|ref|ZP_05159923.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59]
 gi|254700436|ref|ZP_05162264.1| inner-membrane translocator [Brucella suis bv. 5 str. 513]
 gi|254708357|ref|ZP_05170185.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10]
 gi|254708791|ref|ZP_05170602.1| inner-membrane translocator [Brucella pinnipedialis B2/94]
 gi|254714633|ref|ZP_05176444.1| inner-membrane translocator [Brucella ceti M644/93/1]
 gi|254717531|ref|ZP_05179342.1| inner-membrane translocator [Brucella ceti M13/05/1]
 gi|254730979|ref|ZP_05189557.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292]
 gi|256030317|ref|ZP_05443931.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1]
 gi|256160488|ref|ZP_05458177.1| inner-membrane translocator [Brucella ceti M490/95/1]
 gi|256255694|ref|ZP_05461230.1| inner-membrane translocator [Brucella ceti B1/94]
 gi|256258199|ref|ZP_05463735.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68]
 gi|256263276|ref|ZP_05465808.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2
           str. 63/9]
 gi|260167991|ref|ZP_05754802.1| inner-membrane translocator [Brucella sp. F5/99]
 gi|260547107|ref|ZP_05822845.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038]
 gi|260565720|ref|ZP_05836203.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1
           str. 16M]
 gi|260758703|ref|ZP_05871051.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292]
 gi|260762537|ref|ZP_05874874.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884500|ref|ZP_05896114.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68]
 gi|261214751|ref|ZP_05929032.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya]
 gi|261219366|ref|ZP_05933647.1| inner-membrane translocator [Brucella ceti M13/05/1]
 gi|261222905|ref|ZP_05937186.1| inner-membrane translocator [Brucella ceti B1/94]
 gi|261315855|ref|ZP_05955052.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10]
 gi|261316285|ref|ZP_05955482.1| inner-membrane translocator [Brucella pinnipedialis B2/94]
 gi|261322428|ref|ZP_05961625.1| inner-membrane translocator [Brucella ceti M644/93/1]
 gi|261750937|ref|ZP_05994646.1| inner-membrane translocator [Brucella suis bv. 5 str. 513]
 gi|261757436|ref|ZP_06001145.1| bacterial inner-membrane translocator [Brucella sp. F5/99]
 gi|265987351|ref|ZP_06099908.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1]
 gi|265998864|ref|ZP_06111421.1| inner-membrane translocator [Brucella ceti M490/95/1]
 gi|297249049|ref|ZP_06932757.1| branched-chain amino acid transport system permease [Brucella
           abortus bv. 5 str. B3196]
 gi|306841502|ref|ZP_07474202.1| inner-membrane translocator [Brucella sp. BO2]
 gi|17982149|gb|AAL51441.1| high-affinity branched-chain amino acid transport system permease
           protein livm [Brucella melitensis bv. 1 str. 16M]
 gi|62196788|gb|AAX75088.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|82616671|emb|CAJ11754.1| Bacterial inner-membrane translocator [Brucella melitensis biovar
           Abortus 2308]
 gi|148370785|gb|ABQ60764.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ovis ATCC 25840]
 gi|189020440|gb|ACD73162.1| Bacterial inner-membrane translocator [Brucella abortus S19]
 gi|225616193|gb|EEH13241.1| high-affinity branched-chain amino acid transport system permease
           protein LIVM [Brucella ceti str. Cudo]
 gi|225641601|gb|ACO01515.1| inner-membrane translocator [Brucella melitensis ATCC 23457]
 gi|237788619|gb|EEP62832.1| high-affinity branched-chain amino acid transport system permease
           protein LIVM [Brucella abortus str. 2308 A]
 gi|260095472|gb|EEW79350.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038]
 gi|260151093|gb|EEW86188.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1
           str. 16M]
 gi|260669021|gb|EEX55961.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292]
 gi|260672963|gb|EEX59784.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59]
 gi|260874028|gb|EEX81097.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68]
 gi|260916358|gb|EEX83219.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya]
 gi|260921489|gb|EEX88142.1| inner-membrane translocator [Brucella ceti B1/94]
 gi|260924455|gb|EEX91023.1| inner-membrane translocator [Brucella ceti M13/05/1]
 gi|261295118|gb|EEX98614.1| inner-membrane translocator [Brucella ceti M644/93/1]
 gi|261295508|gb|EEX99004.1| inner-membrane translocator [Brucella pinnipedialis B2/94]
 gi|261304881|gb|EEY08378.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10]
 gi|261737420|gb|EEY25416.1| bacterial inner-membrane translocator [Brucella sp. F5/99]
 gi|261740690|gb|EEY28616.1| inner-membrane translocator [Brucella suis bv. 5 str. 513]
 gi|262553553|gb|EEZ09322.1| inner-membrane translocator [Brucella ceti M490/95/1]
 gi|263093241|gb|EEZ17338.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2
           str. 63/9]
 gi|264659548|gb|EEZ29809.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1]
 gi|297174182|gb|EFH33539.1| branched-chain amino acid transport system permease [Brucella
           abortus bv. 5 str. B3196]
 gi|306288466|gb|EFM59822.1| inner-membrane translocator [Brucella sp. BO2]
 gi|326409794|gb|ADZ66859.1| Bacterial inner-membrane translocator [Brucella melitensis M28]
 gi|326539510|gb|ADZ87725.1| inner-membrane translocator [Brucella melitensis M5-90]
          Length = 459

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 131/343 (38%), Positives = 197/343 (57%), Gaps = 6/343 (1%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + ++      VYP+L+   LG   S K++D+ G+QILIYVM AWGL+IVVG  GLL L  
Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           V  YA+GAYSY IL S +GLS W+L+P++ +++   G+I+G P L+ RGDYLAI TL   
Sbjct: 163 VAFYAVGAYSYAILSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186
           EI + +LI W  +T G  GI    +  F G             F    S   Y+ F+YYV
Sbjct: 223 EIIRLVLINWTDLTRGTFGISGIAKATFFGLPFNASKDGFAAHFGLAFSAAHYKFFLYYV 282

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +  L+A + + LRR  +  AW  +R+++ A  SL       KL+AFA  + F G AG
Sbjct: 283 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 342

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +FFAA +  +SP+ F F E+ ++++IV+LGGM SL  IA A  ++IG  E+   M+  + 
Sbjct: 343 SFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 400

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
             +   D +  +    +  +A+ +V++ +    +  R PS FL
Sbjct: 401 KIIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFL 443


>gi|256061815|ref|ZP_05451950.1| inner-membrane translocator [Brucella neotomae 5K33]
 gi|261325819|ref|ZP_05965016.1| inner-membrane translocator [Brucella neotomae 5K33]
 gi|261301799|gb|EEY05296.1| inner-membrane translocator [Brucella neotomae 5K33]
          Length = 459

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 130/343 (37%), Positives = 197/343 (57%), Gaps = 6/343 (1%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + ++      VYP+L+   LG   S K++D+ G+QILIYVM AWGL+IVVG  GLL L  
Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           V  YA+GAYSY +L S +GLS W+L+P++ +++   G+I+G P L+ RGDYLAI TL   
Sbjct: 163 VAFYAVGAYSYAMLSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186
           EI + +LI W  +T G  GI    +  F G             F    S   Y+ F+YYV
Sbjct: 223 EIIRLVLINWTDLTRGTFGISGIAKATFFGLPFNASKDGFAAHFGLAFSAAHYKFFLYYV 282

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +  L+A + + LRR  +  AW  +R+++ A  SL       KL+AFA  + F G AG
Sbjct: 283 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 342

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +FFAA +  +SP+ F F E+ ++++IV+LGGM SL  IA A  ++IG  E+   M+  + 
Sbjct: 343 SFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 400

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
             +   D +  +    +  +A+ +V++ +    +  R PS FL
Sbjct: 401 KIIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFL 443


>gi|256045387|ref|ZP_05448281.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1]
 gi|265991816|ref|ZP_06104373.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1]
 gi|263002772|gb|EEZ15175.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1]
          Length = 459

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 130/343 (37%), Positives = 196/343 (57%), Gaps = 6/343 (1%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + ++      VYP+L+   LG   S K++D+ G+QILIYVM AWGL+IVVG  GLL L  
Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           V  YA+GAYSY IL S +GLS W+L+P++ +++   G+I+G P L+ RGDYLAI TL   
Sbjct: 163 VAFYAVGAYSYAILSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186
           EI + +LI W  +T G  GI    +  F G             F    S   Y+ F+YYV
Sbjct: 223 EIIRLVLINWTDLTRGTFGISGIAKATFFGLPFNASKDGFAAHFGLAFSAAHYKFFLYYV 282

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +  L+A + + LRR  +  AW  +R+++ A  SL       KL+AFA  + F G AG
Sbjct: 283 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 342

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +FFAA +  +SP+ F   E+ ++++IV+LGGM SL  IA A  ++IG  E+   M+  + 
Sbjct: 343 SFFAARQGFVSPESFVLLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 400

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
             +   D +  +    +  +A+ +V++ +    +  R PS FL
Sbjct: 401 KIIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFL 443


>gi|254689944|ref|ZP_05153198.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870]
 gi|260755480|ref|ZP_05867828.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870]
 gi|260675588|gb|EEX62409.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870]
          Length = 459

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 130/343 (37%), Positives = 196/343 (57%), Gaps = 6/343 (1%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + ++      VYP+L+   LG   S K++D+ G+QILIYVM AWGL+IVVG  GLL L  
Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           V  YA+GAYSY IL S +GLS W+L+P++ +++   G+I+G P L+ RGDYLAI TL   
Sbjct: 163 VAFYAVGAYSYAILSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186
           EI + +LI W  +T G  GI    +  F G             F    S   Y+ F+YYV
Sbjct: 223 EIIRLVLINWTDLTRGTFGISGIAKATFFGLPFNASKDGFAAHFGLAFSAAHYKFFLYYV 282

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +  L+A + + LRR  +  AW  +R+++ A  SL       KL+AFA  + F G AG
Sbjct: 283 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 342

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +FFAA +  +SP+ F F E+ ++++ V+LGGM SL  IA A  ++IG  E+   M+  + 
Sbjct: 343 SFFAARQGFVSPESFVFLESAVILANVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 400

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
             +   D +  +    +  +A+ +V++ +    +  R PS FL
Sbjct: 401 KIIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFL 443


>gi|227823057|ref|YP_002827029.1| putative transmembrane component of ABC transporter [Sinorhizobium
           fredii NGR234]
 gi|227342058|gb|ACP26276.1| putative transmembrane component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 461

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 124/345 (35%), Positives = 197/345 (57%), Gaps = 6/345 (1%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + KI  L  V+YP ++   +G   S K++D+ G+QILIYVM AWGL+IVVG  GLL L  
Sbjct: 105 FSKIAILALVLYPPVIIALVGVQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 164

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           V  YA+GAYSY +L S +GLS W+L+PV+ +++   G+++G P L+ RGDYLAI TL   
Sbjct: 165 VAFYAVGAYSYALLSSYFGLSFWVLLPVAGILAACWGVVLGFPVLRLRGDYLAIVTLAFG 224

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186
           EI + +LI W  +T G  G+    +    G                P S   Y+IF++Y+
Sbjct: 225 EIIRLVLINWTEVTKGTFGVSGIAKATLFGIKFDASKDGFAALMGLPLSSAYYKIFLFYL 284

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +LG+  L+A + + LRR  +  AW  +R+++ A  SL       KL+AFA  + F G AG
Sbjct: 285 ILGLALLTAFVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 344

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +FFA  +  +SP+ F F E+ ++++IV+LGGM SL+ I  A  ++IG  E+   +   + 
Sbjct: 345 SFFAVRQGFVSPESFVFLESAVILAIVVLGGMGSLTGIFVAAVVMIGGTEILRELT--FL 402

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             +   + +  +    +  +A+ +V++ +    +  R P+ FL  
Sbjct: 403 KMIFGPNFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPTAFLRE 447


>gi|170743531|ref|YP_001772186.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168197805|gb|ACA19752.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 475

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 109/325 (33%), Positives = 173/325 (53%), Gaps = 6/325 (1%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
           G     +Y   + I +L YVM  WGL+IVVG  GLL L  V  YA+GAY+Y +L + +G 
Sbjct: 139 GGLNESRYWIDLAILVLTYVMLGWGLNIVVGLAGLLDLGYVAFYAVGAYTYALLSTTFGF 198

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S W+ +P++ +++   GM++G P L+ RGDYLAI TL   EI + +LI W   + G AGI
Sbjct: 199 SFWICLPLAGLLAACWGMLLGFPVLRLRGDYLAIVTLAFGEIIRLVLINWTDFSGGAAGI 258

Query: 151 YVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
               R+ F G                  S +   +F+YY++L +  L+  + L +RR  +
Sbjct: 259 SSIPRVTFFGLPFSADEDGFAATLGIAFSPMHRVVFLYYLILALALLTNGVTLRMRRLPL 318

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             AW  +R+++ A  SL       KL+AFA+ + F G AG+FFA  +  +SP+ F F E+
Sbjct: 319 GRAWEALREDEIACRSLGINTTNTKLTAFALGAMFGGFAGSFFAVRQGFVSPESFNFLES 378

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            I+++IV+LGGM S   +A A   ++   EL   +   +  ++       +     L  +
Sbjct: 379 AIILAIVVLGGMGSQIGVAIAAVAMVAGPELLRNLG--FLKAVFGEGFDPSEYRLLLFGL 436

Query: 327 ALFLVILMRSHSLLRLRTPSNFLER 351
           A+ L+++ R   L+  R PS  L+ 
Sbjct: 437 AMVLMMIWRPRGLISERAPSVVLKE 461


>gi|23502644|ref|NP_698771.1| branched-chain amino acid ABC transporter permease [Brucella suis
           1330]
 gi|161619712|ref|YP_001593599.1| inner-membrane translocator [Brucella canis ATCC 23365]
 gi|163845366|ref|YP_001623021.1| hypothetical protein BSUIS_B1266 [Brucella suis ATCC 23445]
 gi|254703556|ref|ZP_05165384.1| hypothetical protein Bsuib36_06464 [Brucella suis bv. 3 str. 686]
 gi|261754191|ref|ZP_05997900.1| inner-membrane translocator [Brucella suis bv. 3 str. 686]
 gi|23348651|gb|AAN30686.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella suis 1330]
 gi|161336523|gb|ABX62828.1| inner-membrane translocator [Brucella canis ATCC 23365]
 gi|163676089|gb|ABY40199.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|261743944|gb|EEY31870.1| inner-membrane translocator [Brucella suis bv. 3 str. 686]
          Length = 459

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 129/343 (37%), Positives = 196/343 (57%), Gaps = 6/343 (1%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + ++      VYP+L+   LG   S +++D+ G+QILIYVM AWGL+IVVG  GLL L  
Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLEWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           V  YA+GAYSY IL S +GLS W+L+P++ +++   G+I+G P L+ RGDYLAI TL   
Sbjct: 163 VAFYAVGAYSYAILSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186
           EI + +LI W  +T G   I    +  F G             F    S   Y+ F+YYV
Sbjct: 223 EIIRLVLINWTDLTRGTFDISGIAKATFFGLPFNASKDGFAAHFGLAFSAAHYKFFLYYV 282

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +  L+A + + LRR  +  AW  +R+++ A  SL       KL+AFA  + F G AG
Sbjct: 283 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 342

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +FFAA +  +SP+ F F E+ ++++IV+LGGM SL  IA A  ++IG  E+   M+  + 
Sbjct: 343 SFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 400

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
             +   D +  +    +  +A+ +V++ +    +  R PS FL
Sbjct: 401 KIIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFL 443


>gi|260568863|ref|ZP_05839331.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40]
 gi|260154247|gb|EEW89329.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40]
          Length = 459

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 129/343 (37%), Positives = 196/343 (57%), Gaps = 6/343 (1%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + ++      VYP+L+   LG   S +++D+ G+QILIYVM AWGL+IVVG  GLL L  
Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLEWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           V  YA+GAYSY IL S +GLS W+L+P++ +++   G+I+G P L+ RGDYLAI TL   
Sbjct: 163 VAFYAVGAYSYAILSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186
           EI + +LI W  +T G   I    +  F G             F    S   Y+ F+YYV
Sbjct: 223 EIIRLVLINWTDLTRGTFDISGIAKATFFGLPFNASKDGFAAHFGLAFSAARYKFFLYYV 282

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +  L+A + + LRR  +  AW  +R+++ A  SL       KL+AFA  + F G AG
Sbjct: 283 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 342

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +FFAA +  +SP+ F F E+ ++++IV+LGGM SL  IA A  ++IG  E+   M+  + 
Sbjct: 343 SFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 400

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
             +   D +  +    +  +A+ +V++ +    +  R PS FL
Sbjct: 401 KIIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFL 443


>gi|306844771|ref|ZP_07477356.1| inner-membrane translocator [Brucella sp. BO1]
 gi|306274943|gb|EFM56713.1| inner-membrane translocator [Brucella sp. BO1]
          Length = 459

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 132/343 (38%), Positives = 197/343 (57%), Gaps = 6/343 (1%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + ++      VYP+L+   LG   S K++D+ G+QILIYVM AWGL+IVVG  GLL L  
Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           V  YA+GAYSY IL S +GLS W+L+P++ +++   G+I+G P L+ RGDYLAI TL   
Sbjct: 163 VAFYAVGAYSYAILSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYV 186
           EI + ILI W  +T G  GI    +  F G             F    S   Y+ F+YYV
Sbjct: 223 EIIRLILINWTDLTRGTFGISGIAKATFFGLPFNASKDGFAAHFGLAFSAAHYKFFLYYV 282

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +  L+A + + LRR  +  AW  +R+++ A  SL       KL+AFA  + F G AG
Sbjct: 283 ILLLALLTAWVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAG 342

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +FFAA +  +SP+ F F E+ ++++IV+LGGM SL  IA A  ++IG  E+   M+  + 
Sbjct: 343 SFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FL 400

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
             +   D +  +    +  +A+ +V++ +    +  R PS FL
Sbjct: 401 KMIFGPDFTPELYRMLIFGLAMVVVMVWKPRGFVGSREPSAFL 443


>gi|325293776|ref|YP_004279640.1| branched chain amino acid ABC transporter transmembrane protein
           [Agrobacterium sp. H13-3]
 gi|325061629|gb|ADY65320.1| branched chain amino acid ABC transporter, membrane spanning
           protein [Agrobacterium sp. H13-3]
          Length = 465

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 129/329 (39%), Positives = 191/329 (58%), Gaps = 8/329 (2%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
             G   S K++D+ GIQILIYVM AWGL+IVVG  GLL L  V  YA+GAYSY +L S  
Sbjct: 125 LFGFQGSLKFVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGYVAFYAVGAYSYALLSSHL 184

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           GLS W+L+PV+ +++G  G+I+G P L+ RGDYLAI TL   EI + +L+ W  +T G  
Sbjct: 185 GLSFWVLLPVAGILAGFWGIILGFPVLRLRGDYLAIVTLAFGEIIRLVLLNWTDVTKGTF 244

Query: 149 GIYVADRLYFLGTT------VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           GI    +    G          +  + F    S   Y+IF++YV+L +C L+A + + LR
Sbjct: 245 GISGIAKASIFGIWSFDVGAPNNFAKAFGLTMSSAYYKIFLFYVILLLCMLTAYVTIKLR 304

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R  I  AW  +R+++ A  SL    +  KL+AFA  + F G AG+FFAA +  +SP+ F 
Sbjct: 305 RMPIGRAWEALREDEIACRSLGIDTVITKLTAFATGAMFGGFAGSFFAARQGFVSPESFV 364

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F E+ ++++IV+LGGM SL+ IA A  +++G  EL   M   +   +   D +  +    
Sbjct: 365 FLESAVILAIVVLGGMGSLTGIAIAALVMVGGTELLREME--FLKHVFGPDFTPELYRML 422

Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLER 351
           L  +A+ +V+L +    +  R P+ FL  
Sbjct: 423 LFGLAMVIVMLFKPRGFVGSREPTAFLRE 451


>gi|15889696|ref|NP_355377.1| ABC transporter, membrane spanning protein (branched chain amino
           acid) [Agrobacterium tumefaciens str. C58]
 gi|15157604|gb|AAK88162.1| ABC transporter, membrane spanning protein (branched chain amino
           acid) [Agrobacterium tumefaciens str. C58]
          Length = 465

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 133/347 (38%), Positives = 203/347 (58%), Gaps = 8/347 (2%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + K   +L ++YP++     G   S K++D+ GIQILIYVM AWGL+IVVG  GLL L  
Sbjct: 107 FLKFALVLLLLYPVIAVQLFGFQGSLKFVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGY 166

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           V  YA+GAYSY +L S++GLS W+L+PV+ +++G  G+I+G P L+ RGDYLAI TL   
Sbjct: 167 VAFYAVGAYSYALLSSQFGLSFWVLLPVAGILAGFWGVILGFPVLRLRGDYLAIVTLAFG 226

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTT------VRSLIRFFRFPSSFVIYEIFMY 184
           EI + +L+ W  +T G  GI    +    G          +  + F    S   Y+IF++
Sbjct: 227 EIIRLVLLNWTAVTKGTFGISGIAKASVFGIWSFDVGAPNNFAKVFGLSMSSAYYKIFLF 286

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           YV+L +C L+A + + LRR  I  AW  +R+++ A  SL    +  KL+AFA  + F G 
Sbjct: 287 YVILLLCMLTAYVTIKLRRMPIGRAWEALREDEIACRSLGIDTVITKLTAFATGAMFGGF 346

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG+FFAA +  +SP+ F F E+ ++++IV+LGGM SL+ IA A  +++G  EL   M   
Sbjct: 347 AGSFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLTGIAIAALVMVGGTELLREME-- 404

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +   +   D +  +    L  +A+ +V+L +    +  R P+ FL  
Sbjct: 405 FLKHVFGPDFTPELYRMLLFGLAMVIVMLFKPRGFVGSREPTAFLRE 451


>gi|170748668|ref|YP_001754928.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
 gi|170655190|gb|ACB24245.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
          Length = 464

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 123/342 (35%), Positives = 185/342 (54%), Gaps = 6/342 (1%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +   +A+  P++  L  G   S +Y   +GI IL YVM  WGL+IVVG  GLL L  V
Sbjct: 109 LWLFIFVALTLPMISALATGGLSSARYWIDLGILILTYVMLGWGLNIVVGLAGLLDLGYV 168

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             YA+GAYSY +L + +GLS W+ +P++ + +G  GMI+G P L+ RGDYLAI TL   E
Sbjct: 169 AFYAVGAYSYALLSTTFGLSFWVCLPLAGLFAGLWGMILGFPVLRLRGDYLAIVTLAFGE 228

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMYYVL 187
           I + +LI W  +T G AGI    R  F G             F  P   +   +F+YY++
Sbjct: 229 IIRLVLINWTDVTGGGAGISSIPRATFFGIPFTAGEGGFAATFGIPYDSMHRLVFLYYLI 288

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +  ++  + L LRR  I  AW  +R+++ A  SL       KL+AFA+ +AF G AG+
Sbjct: 289 LALALITNFVTLRLRRLPIGRAWEALREDEIACRSLGIDTTATKLTAFALGAAFGGFAGS 348

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
           FFA  +  ISP+ F F E+ I+++IV+LGGM S   +A A   ++G  E+   +   +  
Sbjct: 349 FFAVRQGFISPESFNFLESAIILAIVVLGGMGSQVGVAIAAVAMVGGPEMLRNLG--FLK 406

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
           ++       +     L  +A+  +++ R   L+  R PS  L
Sbjct: 407 AVFGEGFDPSEYRLLLFGLAMVAMMVWRPRGLISERMPSVSL 448


>gi|224370454|ref|YP_002604618.1| ABC-type branched-chain amino acid transport system, permease
           component [Desulfobacterium autotrophicum HRM2]
 gi|223693171|gb|ACN16454.1| ABC-type branched-chain amino acid transport system, permease
           component [Desulfobacterium autotrophicum HRM2]
          Length = 624

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 83/329 (25%), Positives = 145/329 (44%), Gaps = 35/329 (10%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +++ +L    +       Y  S+     IYVM A GL+IV G  GLL L+ V  + IG
Sbjct: 15  VTIIFFVLALAVIPVILPNTYWQSIFSMTGIYVMLALGLNIVAGFTGLLDLSYVAFFGIG 74

Query: 78  AYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            Y++  L S +    L   L IPV A+ +   G ++GL S++ +GDYLAI TL  ++IF+
Sbjct: 75  GYTFAFLCSDHFGIHLPFLLAIPVCAITAMVAGFLLGLTSIRLKGDYLAIVTLAFAQIFK 134

Query: 135 NILIKWK---PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            +L+       IT G  G+Y  D +      V +   +                ++    
Sbjct: 135 LLLLNLDAPVNITGGVNGLYAFDMISVFSIKVTTPEHYST--------------LIWTCA 180

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L   + + L+ + I   W  IR+++ A  ++       KL +FA  +   G +GA FA+
Sbjct: 181 LLVFVVSVRLKSSRIGRGWNAIREDELAANTIGINTTRMKLYSFASGALIAGFSGALFAS 240

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +D + P+ F F + +IV  +VI+GG+ ++  +     IL  + E+              
Sbjct: 241 FQDSVFPNSFGFQQLVIVYCMVIIGGLGNVYGVIAGAVILSILPEILREYGG-------- 292

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                      +  + L  ++ +R   L 
Sbjct: 293 -------LRMMIYGLVLVGIMAIRPQGLF 314


>gi|209965126|ref|YP_002298041.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Rhodospirillum centenum SW]
 gi|209958592|gb|ACI99228.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Rhodospirillum centenum SW]
          Length = 435

 Score =  150 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 101/340 (29%), Positives = 163/340 (47%), Gaps = 23/340 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             +       +      S +YI  +G   LIYV+   GL++ VG  GLL L  V  YAIG
Sbjct: 97  FVIAGIGFAAVMPFLPFSDRYILDLGTTALIYVLLGMGLNVTVGLAGLLDLGFVAFYAIG 156

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY++ +L    GL  WL +P+S +++    +++ LP L+ RGDYLAI TL   EI + ++
Sbjct: 157 AYTFALLAKFAGLGFWLSLPLSGLVAALFAVLLSLPILRLRGDYLAIVTLGFGEITRIVI 216

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVR--------SLIRFFRFPSSFVIYEIFMYYVLLG 189
           + W+ +T G  G+    R    G +          S         S     +F+Y+++L 
Sbjct: 217 LNWQSLTGGPNGVAGIPRPSLFGISFERRPPEGQVSFHELTGIAFSSEHRMMFLYFIILV 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   ++  +  LRR  I  AW  +R+++ A  SL      AK+SA+A  +   G+AG FF
Sbjct: 277 LVLAASWAVWRLRRLPIGRAWEALREDEIACRSLGINPTAAKVSAYATGAMLGGLAGCFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           +A +  +SP+ F F E+ I+++IV+LGGM S   +  A   ++ + E       Y     
Sbjct: 337 SARQGFVSPESFTFIESAIILAIVVLGGMGSQIGVVIAALFIVLLPEFAREFADY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
                        L   A+ L+++ R   LL  R P+  L
Sbjct: 392 ----------RMLLFGAAMILIMVWRPGGLLSGRDPTLRL 421


>gi|13473392|ref|NP_104959.1| permease of ABC branched-chain amino acid transporter
           (high-affinity branched-chain amino acid transport)
           [Mesorhizobium loti MAFF303099]
 gi|14024141|dbj|BAB50745.1| permease of ABC branched-chain amino acid transporter
           (high-affinity branched-chain amino acid transport)
           [Mesorhizobium loti MAFF303099]
          Length = 531

 Score =  150 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 130/343 (37%), Positives = 201/343 (58%), Gaps = 8/343 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++AV+      +  G   S K++D+ GIQILIYVM AWGL+IVVG  GLL L  V  Y
Sbjct: 177 ILVVAVLSLNAWSIAGGLQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGYVAFY 236

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GAY+Y +L + YGLS W+L+P +  ++   G+++G P L+ RGDYLAI TL   EI +
Sbjct: 237 ALGAYAYALLATHYGLSFWILLPAAGCMAALWGVLLGFPVLRLRGDYLAIVTLAFGEIIR 296

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF------PSSFVIYEIFMYYVLL 188
            +LI W+ +TNG AGI    ++ F G    ++             +S   Y+IF+YY++L
Sbjct: 297 LVLINWREVTNGSAGISGIPKVSFFGLMTFNVSDPNYIAKVLHLATSSAYYKIFLYYLIL 356

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
           G+C L+A + + LRR  +  AW  +R+++ A  SL       KL+AFA  + F G AG+F
Sbjct: 357 GLCLLTAFVTIRLRRLPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAGSF 416

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           FAA +  +SP+ F F E+ I+++IV+LGGM SL  IA A  ++IG  E    ++  +   
Sbjct: 417 FAARQGFVSPESFVFLESAIILAIVVLGGMGSLVGIAVAAMVMIGGTEALRELD--FLKQ 474

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +   D +  +    L  +A+ +V+L +    +  R P+ FL+ 
Sbjct: 475 IFGPDFTPELYRMLLFGMAMVIVMLWKPRGFVGSREPTAFLKE 517


>gi|222086823|ref|YP_002545357.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221724271|gb|ACM27427.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 463

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 130/347 (37%), Positives = 197/347 (56%), Gaps = 8/347 (2%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           ++K+     +VYP+L     G   S  Y+D+ GIQILIYVM AWGL+IVVG  GLL L  
Sbjct: 105 FNKMALAFLLVYPMLALALFGPQGSLTYVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGY 164

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           V  YA+GAYSY +L + +GLS W+L+P+S + +   GM++G P L+ RGDYLAI TL   
Sbjct: 165 VAFYAVGAYSYALLSTHFGLSFWILLPLSGIFAALWGMVLGFPVLRLRGDYLAIVTLAFG 224

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF------RFPSSFVIYEIFMY 184
           EI + +L  W  +T G  GI    +    G     +             +S   Y+IF++
Sbjct: 225 EIIRIVLTNWTDVTKGSFGISNITKASLFGLYTFDMKDPHNVIRTFGLSTSSAWYKIFLF 284

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           YV+L +C L+A + + LRR  I  AW  +R+++ A  SL    +  KL+AF+  + F G 
Sbjct: 285 YVILALCALTAYVTIRLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFSTGAMFGGF 344

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG+FFAA +  +SP+ F F E+ ++++IV+LGGM SL  IA A   +IG  EL   M   
Sbjct: 345 AGSFFAARQGFVSPESFVFLESAVILAIVVLGGMGSLKGIAIAAIAMIGGTELLRSMG-- 402

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +   +   D +  +    +  +A+ +V+L++    +  R P+ FL+ 
Sbjct: 403 FLKIIFGADFTPELYRMLIFGLAMVVVMLVKPRGFVGTREPTAFLKE 449


>gi|251797606|ref|YP_003012337.1| ABC transporter [Paenibacillus sp. JDR-2]
 gi|247545232|gb|ACT02251.1| ABC transporter related [Paenibacillus sp. JDR-2]
          Length = 608

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 71/309 (22%), Positives = 126/309 (40%), Gaps = 31/309 (10%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
            +  Y+ ++   I IYV+   G++I+VG  G++S+      A GAY+     + YGL+ W
Sbjct: 31  TADTYMLNLFFTIGIYVIACVGMNILVGYCGIVSIGHAGLMAAGAYTSAYASTHYGLNFW 90

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L       +S   G ++ +P++K  G YL++ T+    +    LI+W  +T G  GI   
Sbjct: 91  LSALAGIAVSLIIGSLIAIPTIKAGGVYLSMITIAFGVVVHEALIRWDGVTGGPLGISGV 150

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            +    G T                     Y + + +   +  +   +RR+A   +    
Sbjct: 151 PKPKLGGYTFDLQSM---------------YLLAVAVAVGALILAYNIRRSAWGRSMIAT 195

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           ++N+ A  SL       +   FAVS+   G+AG  +A +   ISPD + F  ++ ++ IV
Sbjct: 196 KENEIAAASLGIRKFKPQYVGFAVSAVLAGLAGTLYAHTNSFISPDTYHFQASVQLVLIV 255

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ILGG   L        IL+ + E+                         L    +F V+ 
Sbjct: 256 ILGGSGRLLGPIIGAIILVFLPEVL----------------EMEKLRMALYGTIMFAVLY 299

Query: 334 MRSHSLLRL 342
                ++  
Sbjct: 300 FLPKGIMGT 308


>gi|154247824|ref|YP_001418782.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154161909|gb|ABS69125.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 505

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 184/354 (51%), Gaps = 20/354 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
            A+ YP L  L  G     +Y   +GI +L YVM  WGL+IVVG  GLL L  V  YA+G
Sbjct: 138 FAIAYPFLAILLAGGLSPSRYWVDLGIYVLTYVMLGWGLNIVVGLAGLLDLGYVAFYAVG 197

Query: 78  AYSYVILGS----------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           AY++ +L +                    S WL +PVS +++   G+I+G P L+ RGDY
Sbjct: 198 AYTFALLSTSVPVNDFFAGHLGEGFWTAWSFWLCLPVSGLLAAFWGVILGFPVLRLRGDY 257

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFV 177
           LAI TL   EI + +LI W  +TNG AGI     + F G             +      +
Sbjct: 258 LAIVTLAFGEIIRLVLINWVSLTNGGAGISSIPPISFFGVPFNATDEGFAAKYGLDFDSM 317

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
              IF+Y+V+LG+  L+A + + LR+  +  AW  +R+++ A  SL       KL+AFA 
Sbjct: 318 HRIIFLYFVILGLAALTALVTIRLRQMPVGRAWEALREDEIACRSLGINTTLTKLTAFAT 377

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            + F G AGAFFA     +SP+ F F E+ ++++IV+LGGM S   +A A  +LIG +E+
Sbjct: 378 GAMFGGFAGAFFAVRVRFVSPESFTFMESAVILAIVVLGGMGSQMGVAGAAILLIGGMEM 437

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
              ++F   + L   D   ++    +   A+  V++ R   L+  R P+ FL+ 
Sbjct: 438 LRNLSFLKADFLFGPDFDPSLYRMLIFGFAMVAVMVWRPRGLVSSRLPTIFLKE 491


>gi|288962870|ref|YP_003453164.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288915136|dbj|BAI76620.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 498

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 116/359 (32%), Positives = 180/359 (50%), Gaps = 27/359 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M   + R+    + +  +AV +  +L L      + + I  +GI +L Y+M  WGL+IVV
Sbjct: 147 MDRVAARVQHASRYIGPVAVAFAAVLPL---TPLADRMILDIGILLLTYIMLGWGLNIVV 203

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  GLL L  V  YA+GAYSY +L   +GLS WL +P++ +++   G+++G P L+ RGD
Sbjct: 204 GLAGLLDLGYVAFYAVGAYSYALLAHYFGLSFWLCLPLAGVLAACSGVLLGFPVLRLRGD 263

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT---------TVRSLIRFFR 171
           Y AI TL   EI + IL+ W   T G  GI    R  F G           + +    F 
Sbjct: 264 YFAIVTLGFGEIIRIILVNWYQFTGGPNGISGIPRPSFFGIADFSRSPADGMPAFHELFG 323

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
              S +   IF+YY++L +  +     L +R+  +  AW  +R++  A  SL       K
Sbjct: 324 LEFSPLHRIIFLYYLILALALVVNLFTLRVRKLPLGRAWEALREDDIACASLGINRTNMK 383

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           L+AFA+++ F G AG+FFA  +  ISP+ F F E+ I+++IV+LGGM S   +  AT ++
Sbjct: 384 LAAFAIAAMFGGFAGSFFATRQGFISPESFTFIESAIILAIVVLGGMGSQIGVVVATLLV 443

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           IG+ E    +  Y                       + +++L R   LL  R P+  L 
Sbjct: 444 IGLPEAFRELADY---------------RMLAFGAGMVVIMLWRPRGLLAHRDPTILLH 487


>gi|150397596|ref|YP_001328063.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
 gi|150029111|gb|ABR61228.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
          Length = 461

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 126/347 (36%), Positives = 201/347 (57%), Gaps = 6/347 (1%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            ++ KI  ++ ++YP ++  F+G   S K++D+ GIQILIYVM AWGL+IVVG  GLL L
Sbjct: 103 RQWPKIAVVMLLLYPPVIVSFVGVQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDL 162

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
             V  YA+GAYSY +L S +GLS W+L+PV+ +++   G+++G P L+ RGDYLAI TL 
Sbjct: 163 GYVAFYAVGAYSYALLSSYFGLSFWVLLPVAGLLAALWGIVLGFPVLRLRGDYLAIVTLA 222

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMY 184
             EI + +LI W  +T G  G+    +    G             F  P S   Y+IF++
Sbjct: 223 FGEIIRLVLINWTEVTKGTFGVSGIAKATLFGIKFDASKDGFAALFDLPLSSAYYKIFLF 282

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y++L +  L+A + + LRR  I  AW  +R+++ A  SL    +  KL+AFA  + F G 
Sbjct: 283 YLILALALLTAFVTIRLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFGGF 342

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG+FFA  +  +SP+ F F E+ ++++IV+LGGM SL+ IA A  ++IG  E+   +   
Sbjct: 343 AGSFFAVRQGFVSPESFVFLESAVILAIVVLGGMGSLTGIAIAAVVMIGGTEILRELT-- 400

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +   +     +  +    +  +A+  V++ +    +  R P+ FL +
Sbjct: 401 FLKMIFGPAFTPELYRMLIFGLAMVTVMVWKPRGFVGSREPTAFLRQ 447


>gi|238759630|ref|ZP_04620791.1| High-affinity branched-chain amino acid transport system permease
           protein [Yersinia aldovae ATCC 35236]
 gi|238702173|gb|EEP94729.1| High-affinity branched-chain amino acid transport system permease
           protein [Yersinia aldovae ATCC 35236]
          Length = 405

 Score =  148 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   +++          +    +    LIYVM   GL++VVG  GLL L     YAIGA
Sbjct: 68  LLAAVIIIAAVTWPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 127

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   YGL  W  +P++ +++   G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 128 YTYALLNHYYGLGFWESLPLAGIVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 187

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G             +   FF          IF+Y V L 
Sbjct: 188 NNTEITGGPNGISQIPKPTLFGLEFSRTAKDGGWDTFHNFFGLTYDPSDRIIFLYLVALL 247

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 248 LVILTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLF 307

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y     
Sbjct: 308 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY----- 362

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        L+   + L+++ R   LL ++ P   L+
Sbjct: 363 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 393


>gi|301631371|ref|XP_002944771.1| PREDICTED: hypothetical protein LOC100492261 [Xenopus (Silurana)
           tropicalis]
          Length = 647

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 71/334 (21%), Positives = 139/334 (41%), Gaps = 19/334 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L   +  +L  +F        Y   + I   +Y + A  L+  +GS  + +     +Y I
Sbjct: 85  LAVAMGIVLALVFPWVLNGDSYAVHLMIIASLYAVLALALNFQLGSANIPNFATGASYGI 144

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +L   +G+S W+ + V+A+++   G ++GLPS++ R  Y A+ T+    +   +
Sbjct: 145 GAYASALLAIHFGVSFWICLVVAAVVATIFGFLLGLPSMRTRDSYQALVTIAFGIVVHQL 204

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           L+ ++  T G  G+       F G      I  +      +  +   YYV + +  ++  
Sbjct: 205 LMNFEW-TGGANGLVGIPTPTFFGHAFNDPITLWG---QSLPGQANFYYVAVALLGIAIV 260

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               L  + +  AW  +RD++ A  +    +   K+ AFAV +   G AG  +A     I
Sbjct: 261 SAQRLHNSRVGLAWNALRDDEIAAHACGINVTRFKVKAFAVDAFLAGFAGTVYAFYVSFI 320

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SPD F F  ++ ++++VI GGM +   +     +L  + E     + Y            
Sbjct: 321 SPDNFTFLVSVTIMTMVIAGGMDNALGVIVGAFLLTMLPEKLRAFSDY------------ 368

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                    + +   +++R   +   R     + 
Sbjct: 369 ---RILFYGLVVIAFLIIRPRGIFPQRGRGLTMR 399


>gi|118590375|ref|ZP_01547777.1| ABC transporter permease protein [Stappia aggregata IAM 12614]
 gi|118436838|gb|EAV43477.1| ABC transporter permease protein [Stappia aggregata IAM 12614]
          Length = 444

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 109/347 (31%), Positives = 176/347 (50%), Gaps = 19/347 (5%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +L KY   + L+  V    L +    ++  +    + I +  YVM  WGL+IVVG  GLL
Sbjct: 95  KLGKYAMPVFLILAVVLPFLLMSAYGSRGSRQYLDLAILVTTYVMLGWGLNIVVGLAGLL 154

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L  V  YA+GAYSY +L   +G S W+ +P++ +++   G+I+G P L+ RGDYLAI T
Sbjct: 155 DLGYVAFYAVGAYSYALLAQYFGFSFWICLPLAGILAAFWGIILGFPVLRLRGDYLAIVT 214

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIF 182
           L   EI + +L+ W   T G  GI    R  F G             F    + +   IF
Sbjct: 215 LAFGEIIRVVLLNWYDFTGGPDGISGIPRPSFFGIEFERGPGGFADTFGLEYNSIHRIIF 274

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +YY++L M  ++  + + LR+  +  AW  +R+++ A  SL       KL+AFA+ + F 
Sbjct: 275 LYYLILIMALVTNFVTMRLRKLPVGRAWEALREDEIACRSLGINTTHTKLTAFALGAMFG 334

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G AG+FFA  +  ISP+ F F E+ ++++IV+LGG+ S   +  A  ++IG  E   G+ 
Sbjct: 335 GFAGSFFATRQGFISPESFTFIESAVILAIVVLGGLGSQIGVVIAAVVMIGGFEFFRGLE 394

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
            Y                  +  + + ++++ +   L+  R PS  L
Sbjct: 395 EY---------------RMLVFGLLMVVIMVWKPRGLISTRMPSITL 426


>gi|212704231|ref|ZP_03312359.1| hypothetical protein DESPIG_02286 [Desulfovibrio piger ATCC 29098]
 gi|212672311|gb|EEB32794.1| hypothetical protein DESPIG_02286 [Desulfovibrio piger ATCC 29098]
          Length = 605

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 30/324 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             V+  + +   +    S+ Y  ++     +  +   GL+I++G  G ++L  +    IG
Sbjct: 9   FYVLGAICVIFLIPHIVSENYWLNLLNHCCVMSIACLGLNILLGYTGQINLGQMAFVGIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  +L   +G+ +WL +   A + G CG+++G+PSLK  G YLA+ T+    I Q IL
Sbjct: 69  AYTSALLTVTFGIPVWLGMLCGAAMGGICGVLLGVPSLKLSGHYLAVTTIGFGFIVQLIL 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I W  +T+G  GI     L   G +     ++F F  S V+                   
Sbjct: 129 INWIEVTHGSDGIPQIPVLDLCGISFDDEEKYFYFSGSMVVLL--------------TWA 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS-RDRI 256
           I  L+ + I  A   +R N+ A  +    +   K+ +F +SSA  G+AGA FA      I
Sbjct: 175 ITRLKDSRIGRAMLAVRQNEMAASTNGINVTSCKIVSFTLSSACAGLAGAMFAHGGAHYI 234

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SPD F F ++++++++ +LGG  S         +L  + E    +   Y           
Sbjct: 235 SPDTFSFEQSVLLLAMTVLGGDGSALGAVFGATLLTLLPESLRFLQESY----------- 283

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
                     A+ L+++     + 
Sbjct: 284 ----MMFFAAAIVLIMIYMPGGIA 303


>gi|288962484|ref|YP_003452779.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288914750|dbj|BAI76235.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 498

 Score =  146 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 116/359 (32%), Positives = 180/359 (50%), Gaps = 27/359 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M   + R+    + +  +AV +  +L L      + + I  +GI +L Y+M  WGL+IVV
Sbjct: 147 MDRVAARVQHASRYIGPVAVAFAAVLPL---TPLADRMILDIGILLLTYIMLGWGLNIVV 203

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  GLL L  V  YA+GAYSY +L   +GLS WL +P++ +++   G+++G P L+ RGD
Sbjct: 204 GLAGLLDLGYVAFYAVGAYSYALLAHYFGLSFWLCLPLAGVLAACSGVLLGFPVLRLRGD 263

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT---------TVRSLIRFFR 171
           Y AI TL   EI + IL+ W   T G  GI    R  F G           + +    F 
Sbjct: 264 YFAIVTLGFGEIIRIILVNWYQFTGGPNGISGIPRPSFFGIADFSRSPADGMPAFHELFG 323

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
              S +   IF+YY++L +  +     L +R+  +  AW  +R++  A  SL       K
Sbjct: 324 LEFSPLHRIIFLYYLILALALVVNLFTLRVRKLPLGRAWEALREDDIACASLGINRTNMK 383

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           L+AFA+++ F G AG+FFA  +  ISP+ F F E+ I+++IV+LGGM S   +  AT ++
Sbjct: 384 LAAFAIAAMFGGFAGSFFATRQGFISPESFTFIESAIILAIVVLGGMGSQIGVVVATLLV 443

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           IG+ E    +  Y                       + +++L R   LL  R P+  L 
Sbjct: 444 IGLPEAFRELADY---------------RMLAFGAGMVVIMLWRPRGLLAHRDPTILLH 487


>gi|322834879|ref|YP_004214906.1| inner-membrane translocator [Rahnella sp. Y9602]
 gi|321170080|gb|ADW75779.1| inner-membrane translocator [Rahnella sp. Y9602]
          Length = 429

 Score =  146 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 104/341 (30%), Positives = 162/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   L++          +    +    LIY+M   GL++VVG  GLL L     YAIGA
Sbjct: 91  LLALVLIIAAIAWPFIVSRGTVDIATLTLIYIMLGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   YG+  W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTYALLNHYYGIGFWEALPLAGLVSAAFGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY---------EIFMYYVLLG 189
               +T G  GI    +    G       R   + +    +          IF+Y V L 
Sbjct: 211 NNTELTGGPNGISQIPKPTLFGLEFSRTPRDGGWDTFSNFFNVTYDPSDRIIFLYMVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  II  L R  +  AW  +R+++ A  SL       KL+AF +S+AF G AG  F
Sbjct: 271 LVIATLFIINRLLRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F+E+  V++IV+LGGM S   +  A  +L+   EL   +N Y     
Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        L+   + L+++ R   LL ++ P   L+
Sbjct: 386 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 416


>gi|83593085|ref|YP_426837.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
 gi|83575999|gb|ABC22550.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
          Length = 452

 Score =  146 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 109/349 (31%), Positives = 175/349 (50%), Gaps = 23/349 (6%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + + +  + +   +L  +F     S +Y   +    +IY+M  WGL+IVVG  GLL L  
Sbjct: 107 FRRNMAFIGLAALVLAIVFPITPFSNRYYVDVATTWMIYIMLGWGLNIVVGLAGLLDLGY 166

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           V  YA+GAYSY +L   +G S W+ +P++ + +   G+++G P L+ RGDYLAI TL   
Sbjct: 167 VAFYAVGAYSYALLSQTFGWSFWVCLPLAGVFAAFFGVVLGFPVLRLRGDYLAIVTLGFG 226

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIF 182
           EI + +L+ W  +TNG  GI   +R  F G            +  +FF    S     IF
Sbjct: 227 EIIRVVLLNWYAVTNGPDGISGIERPSFFGLDFARTAPEGGETFHQFFGISYSPDHRVIF 286

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           ++Y++L +  L+      +RR  +  AW  +R+++ A  SL       KLSAFA+ + F 
Sbjct: 287 LFYLILALAVLTNIFTGRIRRLPVGRAWEALREDEIACRSLGINPTNVKLSAFALGAMFG 346

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G AG+FFA  +  ISP+ F F E+ ++++IV+LGGM S   +  A   L+ + E+    +
Sbjct: 347 GFAGSFFATRQGFISPESFTFMESAVILAIVVLGGMGSQIGVVIAAFFLVVLPEVFREFD 406

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            +                      A+  V++ R   LL  R P+   E+
Sbjct: 407 QF---------------RMFFFGAAMVAVMVWRPRGLLSYRDPTILFEK 440


>gi|83717622|ref|YP_440031.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia thailandensis E264]
 gi|167616730|ref|ZP_02385361.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia thailandensis Bt4]
 gi|257143218|ref|ZP_05591480.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia thailandensis E264]
 gi|83651447|gb|ABC35511.1| high-affinity branched-chain amino acid transport system permease
           protein [Burkholderia thailandensis E264]
          Length = 423

 Score =  146 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 160/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+V+ L+   F+      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 97  AIVWALVALGFVWPFIGSRGAIDIATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GL+ W  +P+SA+ S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 157 YTYALLNQYFGLTFWECLPLSALASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 217 NLTSITGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGIEYSGKHVVIFLYLIALV 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + ++F G+ GAFF
Sbjct: 277 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 392 ----------RMLMFGLVMVLMMMWRPQGLLPASRPHVELPQ 423


>gi|300718818|ref|YP_003743621.1| high-affinity branched-chain amino acid ABC transporter permease
           [Erwinia billingiae Eb661]
 gi|299064654|emb|CAX61774.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Erwinia billingiae Eb661]
          Length = 424

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 103/341 (30%), Positives = 166/341 (48%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+  +++          +    +    LIYVM   GL++VVG  GLL L     YA+GA
Sbjct: 91  LVLLVMIIAAVAWPFIVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAVGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YGLS W  +P++ +++   G+++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTFALLNHYYGLSFWECLPLAGLVAAMFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G             +   FF          IF+Y V L 
Sbjct: 211 NNTEITGGPNGISQIPKPSLFGLEFNRSVRDGGWDTFHNFFGLKYDPSDRIIFLYMVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  ++  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG+ F
Sbjct: 271 LVIITLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGSLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F+E+  V++IV+LGGM S   +  A  +L+   EL   +N Y     
Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNEY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        ++   + L+++ R   LL ++ P   L+
Sbjct: 386 ----------SMLVLGGLMVLMMIWRPQGLLPMKRPHLKLK 416


>gi|167578588|ref|ZP_02371462.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia thailandensis TXDOH]
          Length = 423

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 160/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+V+ L+   F+      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 97  AIVWALVALGFVWPFIGSRGAIDIATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GL+ W  +P+SA+ S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 157 YTYALLNQYFGLTFWECLPLSALASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 217 NLTSITGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGIEYSGKHVVIFLYLIALV 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + ++F G+ GAFF
Sbjct: 277 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 392 ----------RMLMFGLVMVLMMMWRPQGLLPASRPHVELPQ 423


>gi|253991195|ref|YP_003042551.1| leucine/isoleucine/valine permease [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782645|emb|CAQ85809.1| high-affinity branched-chain amino acid transport system permeas
           protein livm [Photorhabdus asymbiotica]
          Length = 428

 Score =  145 bits (365), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 103/341 (30%), Positives = 165/341 (48%), Gaps = 24/341 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +   +++   +      +    +    LIYVM   GL++VVG  GLL L     YAIGAY
Sbjct: 92  LAVLIIIAAIVWPFVVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYAGFYAIGAY 151

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L   YGL  W  +P++ + +   G+++G P L+ RGDYLAI TL   EI + +L+ 
Sbjct: 152 TYALLSHYYGLGFWQSLPLAGLTAALSGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLLN 211

Query: 140 WKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190
              IT G  GI    +  F G             +   FF +        IF+Y V+L +
Sbjct: 212 NTEITGGPNGISQIPKPTFFGLEFNRSVKEGGWDTFHNFFGWKYDPSDRVIFLYLVVLLL 271

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +   II  L R  +  AW  +R+++ A  SL  +    KL+AF +S+ F G AG  FA
Sbjct: 272 VIVMIFIINRLLRMPLGRAWEALREDEIACRSLGISPTRIKLAAFTISATFAGFAGTLFA 331

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           A +  +SP+ F F+E+  V++IV+LGGM S + +  A  +L+   E+   +N Y      
Sbjct: 332 ARQGFVSPESFTFAESAFVLAIVVLGGMGSQTAVILAAILLVVSREMMRDLNAY------ 385

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                       L+   + L+++ R   LL ++     L++
Sbjct: 386 ---------SMLLLGAMMVLMMVWRPQGLLPMKRRDVRLKQ 417


>gi|238789419|ref|ZP_04633205.1| High-affinity branched-chain amino acid transport system permease
           protein [Yersinia frederiksenii ATCC 33641]
 gi|238722562|gb|EEQ14216.1| High-affinity branched-chain amino acid transport system permease
           protein [Yersinia frederiksenii ATCC 33641]
          Length = 405

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   +++          +    +    LIYVM   GL++VVG  GLL L     YAIGA
Sbjct: 68  LLAAAIIIAAIAWPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 127

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   YGL  W  +P++ +++   G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 128 YTYALLNHYYGLGFWESLPLAGIVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 187

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G             +   FF          IF+Y V L 
Sbjct: 188 NNTEITGGPNGISQIPKPTLFGLEFSRTAKDGGWDTFHNFFGLNYDPSDRIIFLYMVALL 247

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 248 LVILTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLF 307

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y     
Sbjct: 308 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY----- 362

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        L+   + L+++ R   LL ++ P   L+
Sbjct: 363 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 393


>gi|251791613|ref|YP_003006334.1| leucine/isoleucine/valine transporter permease subunit [Dickeya
           zeae Ech1591]
 gi|247540234|gb|ACT08855.1| inner-membrane translocator [Dickeya zeae Ech1591]
          Length = 424

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 102/341 (29%), Positives = 160/341 (46%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   L++   +      +    +    +IY++   GL++VVG  GLL L     YAIGA
Sbjct: 91  LLALALVIVAVVWPFVVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   YGL  W  +P++ + +   G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTYALLSHYYGLGFWQCLPLAGLTAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
                T G  GI    +  F G             +   FF          IF+Y V L 
Sbjct: 211 NNTGFTGGPNGISQIPKPTFFGLEFNRAPREGGWDTFHHFFGLNYDPSDRIIFLYMVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 271 LVVLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y     
Sbjct: 331 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVVLAAILLVVSRELMRDLNEY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        L+   + L+++ R   LL ++     L+
Sbjct: 386 ----------SMLLLGALMVLMMIWRPQGLLPMKRTQIKLQ 416


>gi|254780896|ref|YP_003065309.1| ABC transporter membrane spanning protein (branched chain amino
           acid) [Candidatus Liberibacter asiaticus str. psy62]
 gi|254040573|gb|ACT57369.1| ABC transporter membrane spanning protein (branched chain amino
           acid) [Candidatus Liberibacter asiaticus str. psy62]
          Length = 351

 Score =  145 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 351/351 (100%), Positives = 351/351 (100%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV
Sbjct: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD
Sbjct: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE
Sbjct: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA
Sbjct: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG
Sbjct: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER
Sbjct: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351


>gi|257094129|ref|YP_003167770.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257046653|gb|ACV35841.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 433

 Score =  145 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 167/345 (48%), Gaps = 21/345 (6%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L  +      +           +Y+      +LIYVM  WGL++VVG  GLL L  V
Sbjct: 98  SPLLTWIGWAALGISVALPMLFSENRYVVDTATTVLIYVMLGWGLNVVVGLAGLLDLGYV 157

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             YA+GAY+Y +L +++G   W  +P++  ++ + G+++G P+L+ RGDYLAI TL   E
Sbjct: 158 AFYAVGAYTYGLLSTQFGWGFWQALPLAGAVAASFGILLGWPTLRLRGDYLAIVTLGFGE 217

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTV------RSLIRFFRFPSSFVIYEIFMYY 185
           I + IL+ W  ++ G  GI    R  F G          +   FF    S     +F+YY
Sbjct: 218 IIRIILVNWTELSGGPNGIASIPRPSFFGLPFKPPGDDPTFASFFGLEFSTNHRIVFLYY 277

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++L +  L+   +  +R+  I  AW  IR+++ A  ++       KLSAFA+ +   G A
Sbjct: 278 LILALALLTNLFVSRMRKLPIGRAWEAIREDEIACKAMGINARNVKLSAFAIGAMLGGFA 337

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G FFAA +  ISP+ F F+E+ I+++IV+LGGM S               +L   +    
Sbjct: 338 GVFFAARQGFISPESFTFNESAIILAIVVLGGMGS---------------QLGVVLASLV 382

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              L +    F      L   A+ L+++ +   +L  R P+    
Sbjct: 383 LVLLPELGRDFAEYRMLLFGAAMILIMIWKPGGILSHREPTLRYR 427


>gi|167035271|ref|YP_001670502.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           putida GB-1]
 gi|166861759|gb|ABZ00167.1| inner-membrane translocator [Pseudomonas putida GB-1]
          Length = 418

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 107/340 (31%), Positives = 166/340 (48%), Gaps = 23/340 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+  L++   +      +    +   ILIYV+   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 94  VIIGLIVAALVWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           SY +L    G S W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L  
Sbjct: 154 SYAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 213

Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
               T G  GI    +  F G T         ++   FF    + +   IF+Y V L + 
Sbjct: 214 LTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTFHEFFGLEYNSINKVIFLYLVALLLA 273

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+  +I  L R  I  AW  +R+++ A  +L       KLSAF + + F G AG+FFAA
Sbjct: 274 LLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGACFAGFAGSFFAA 333

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  ++P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y       
Sbjct: 334 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSEY------- 386

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                      +    + L+++ R   LL ++ P   L R
Sbjct: 387 --------RMLMFGALMVLMMIWRPQGLLPMQRPHMELRR 418


>gi|260466752|ref|ZP_05812938.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259029482|gb|EEW30772.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 531

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 129/343 (37%), Positives = 200/343 (58%), Gaps = 8/343 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++AV+      +  G   S K++D+ GIQILIYVM AWGL+IVVG  GLL L  V  Y
Sbjct: 177 ILVIAVLSLNAWSIVGGMQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGYVAFY 236

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GAY+Y +L + +GLS W+L+P +  ++   G+++G P L+ RGDYLAI TL   EI +
Sbjct: 237 ALGAYAYALLATHFGLSFWILLPAAGAMAALWGVLLGFPVLRLRGDYLAIVTLAFGEIIR 296

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF------RFPSSFVIYEIFMYYVLL 188
            +LI W+ +TNG AGI    ++ F G    ++              S   Y+IF+YY++L
Sbjct: 297 LVLINWREVTNGSAGISGIPKVSFFGLMSFNVSDPNYIAKVLGIAQSGAYYKIFLYYLIL 356

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
           G+C L+A + + LRR  +  AW  +R+++ A  SL       KL+AFA  + F G AG+F
Sbjct: 357 GLCLLTAFVTIRLRRLPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAGSF 416

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           FAA +  +SP+ F F E+ I+++IV+LGGM SL  IA A  ++IG  E    ++  +   
Sbjct: 417 FAARQGFVSPESFVFLESAIILAIVVLGGMGSLVGIAVAAMVMIGGTEALRELD--FLKQ 474

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +   D +  +    L  +A+ +V+L +    +  R P+ FL+ 
Sbjct: 475 IFGPDFTPELYRMLLFGMAMVIVMLWKPRGFVGSREPTAFLKE 517


>gi|238798011|ref|ZP_04641500.1| High-affinity branched-chain amino acid transport system permease
           protein [Yersinia mollaretii ATCC 43969]
 gi|238718114|gb|EEQ09941.1| High-affinity branched-chain amino acid transport system permease
           protein [Yersinia mollaretii ATCC 43969]
          Length = 405

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 105/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    LIYVM   GL++VVG  GLL L     YAIGAY+Y +L   YGL
Sbjct: 80  WPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYYGL 139

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++   G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 140 GFWESLPLAGIVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 199

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  L+  +I  L
Sbjct: 200 SQIPKPTLFGLEFSRTAKDGGWDTFHNFFGLTYDPSDRIIFLYMVALLLVILTLFVINRL 259

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 260 LRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 319

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y                 
Sbjct: 320 TFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY---------------SM 364

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            L+   + L+++ R   LL ++ P   L+
Sbjct: 365 LLLGALMVLMMIWRPQGLLPMKRPQLKLK 393


>gi|238750720|ref|ZP_04612219.1| High-affinity branched-chain amino acid transport system permease
           protein [Yersinia rohdei ATCC 43380]
 gi|238711110|gb|EEQ03329.1| High-affinity branched-chain amino acid transport system permease
           protein [Yersinia rohdei ATCC 43380]
          Length = 405

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 105/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    LIYVM   GL++VVG  GLL L     YAIGAY+Y +L   YGL
Sbjct: 80  WPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYYGL 139

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++   G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 140 GFWESLPLAGIVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 199

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  L+  +I  L
Sbjct: 200 SQIPKPTLFGLEFSRSAKDGGWDTFHNFFGLTYDPGDRIIFLYMVALLLVILTLFVINRL 259

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 260 LRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 319

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL   +N Y                 
Sbjct: 320 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY---------------SM 364

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            L+   + L+++ R   LL ++ P   L+
Sbjct: 365 LLLGALMVLMMIWRPQGLLPMKRPQLKLK 393


>gi|238793537|ref|ZP_04637161.1| High-affinity branched-chain amino acid transport system permease
           protein [Yersinia intermedia ATCC 29909]
 gi|238727127|gb|EEQ18657.1| High-affinity branched-chain amino acid transport system permease
           protein [Yersinia intermedia ATCC 29909]
          Length = 406

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   +++          +    +    LIYVM   GL++VVG  GLL L     YAIGA
Sbjct: 69  LLAAAIIIAAIAWPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 128

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   YGL  W  +P++ +++   G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 129 YTYALLNHYYGLGFWESLPLAGIVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 188

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G             +   FF          IF+Y V L 
Sbjct: 189 NNTEITGGPNGISQIPKPTLFGLEFSRTAKDGGWDTFHNFFGLTYDPSDRIIFLYMVALL 248

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 249 LVILTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLF 308

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y     
Sbjct: 309 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY----- 363

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        L+   + L+++ R   LL ++ P   L+
Sbjct: 364 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 394


>gi|188535380|ref|YP_001909177.1| leucine/isoleucine/valine transporter permease subunit [Erwinia
           tasmaniensis Et1/99]
 gi|188030422|emb|CAO98316.1| High-affinity branched-chain amino acid transport system permease
           protein [Erwinia tasmaniensis Et1/99]
          Length = 424

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 104/330 (31%), Positives = 163/330 (49%), Gaps = 24/330 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    LIYVM   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G+++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWQCLPLAGLVAAAFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  ++  +I  L
Sbjct: 223 SQIPKPTFFGLEFNRSVRDGGWDTFHHFFGLQYDPGDRIIFLYLVALLLVVITLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG+ FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGSLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL   +N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            ++   + L+++ R   LL ++ P   L++
Sbjct: 388 LVLGGLMVLMMIWRPQGLLPMKRPHLKLKQ 417


>gi|26987875|ref|NP_743300.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           putida KT2440]
 gi|24982579|gb|AAN66764.1|AE016304_9 high-affinity branched-chain amino acid transport protein
           [Pseudomonas putida KT2440]
          Length = 418

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 107/340 (31%), Positives = 166/340 (48%), Gaps = 23/340 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+  L++   +      +    +   ILIYV+   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 94  VIIGLIVVALVWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           SY +L    G S W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L  
Sbjct: 154 SYAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 213

Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
               T G  GI    +  F G T         ++   FF    + +   IF+Y V L + 
Sbjct: 214 LTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTFHEFFGLQYNSINKVIFLYLVALLLA 273

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+  +I  L R  I  AW  +R+++ A  +L       KLSAF + + F G AG+FFAA
Sbjct: 274 LLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGACFAGFAGSFFAA 333

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  ++P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y       
Sbjct: 334 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSEY------- 386

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                      +    + L+++ R   LL ++ P   L R
Sbjct: 387 --------RMLMFGALMVLMMIWRPQGLLPMQRPHMELRR 418


>gi|259910106|ref|YP_002650462.1| leucine/isoleucine/valine transporter permease subunit [Erwinia
           pyrifoliae Ep1/96]
 gi|224965728|emb|CAX57260.1| High-affinity branched-chain amino acid transport system permease
           protein [Erwinia pyrifoliae Ep1/96]
 gi|283480202|emb|CAY76118.1| branched-chain amino acid ABC transport system,inner membrane
           component [Erwinia pyrifoliae DSM 12163]
          Length = 424

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 105/330 (31%), Positives = 163/330 (49%), Gaps = 24/330 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    LIYVM   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G+++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWQCLPLAGLVAAAFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  L+  +I  L
Sbjct: 223 SQIPKPTFFGLEFNRSVRDGGWDTFHHFFGLEYDPGDRIIFLYLVALLLVVLTLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG+ FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGSLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL   +N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            ++   + L+++ R   LL ++ P   L++
Sbjct: 388 LVLGGLMVLMMIWRPQGLLPMKRPHLKLKQ 417


>gi|292489948|ref|YP_003532840.1| branched-chain amino acid ABC transporter inner membrane protein
           [Erwinia amylovora CFBP1430]
 gi|292900980|ref|YP_003540349.1| high-affinity branched-chain amino acid ABC transporter permease
           [Erwinia amylovora ATCC 49946]
 gi|291200828|emb|CBJ47962.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Erwinia amylovora ATCC 49946]
 gi|291555387|emb|CBA23790.1| branched-chain amino acid ABC transport system, inner membrane
           component [Erwinia amylovora CFBP1430]
 gi|312174136|emb|CBX82389.1| branched-chain amino acid ABC transport system, inner membrane
           component [Erwinia amylovora ATCC BAA-2158]
          Length = 424

 Score =  143 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 103/330 (31%), Positives = 163/330 (49%), Gaps = 24/330 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    LIYVM   GL++VVG  GLL L     YAIGAY++ ++   YGL
Sbjct: 103 WPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALMNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G+++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWQCLPLAGLVAAAFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  ++  +I  L
Sbjct: 223 SQIPKPTFFGLEFNRSVRDGGWDTFHHFFGLQYDPGDRIIFLYLVALLLVVMTLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG+ FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGSLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL   +N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            ++   + L+++ R   LL ++ P   L++
Sbjct: 388 LVLGGLMVLMMIWRPQGLLPMKRPHLKLQQ 417


>gi|148546416|ref|YP_001266518.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           putida F1]
 gi|148510474|gb|ABQ77334.1| inner-membrane translocator [Pseudomonas putida F1]
          Length = 418

 Score =  143 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 107/340 (31%), Positives = 166/340 (48%), Gaps = 23/340 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+  L++   +      +    +   ILIYV+   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 94  VIIGLIVIALVWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           SY +L    G S W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L  
Sbjct: 154 SYAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 213

Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
               T G  GI    +  F G T         ++   FF    + +   IF+Y V L + 
Sbjct: 214 LTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTFHEFFGLQYNSINKVIFLYLVALLLA 273

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+  +I  L R  I  AW  +R+++ A  +L       KLSAF + + F G AG+FFAA
Sbjct: 274 LLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGACFAGFAGSFFAA 333

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  ++P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y       
Sbjct: 334 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSEY------- 386

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                      +    + L+++ R   LL ++ P   L R
Sbjct: 387 --------RMLMFGALMVLMMIWRPQGLLPMQRPHMELRR 418


>gi|238784408|ref|ZP_04628418.1| High-affinity branched-chain amino acid transport system permease
           protein [Yersinia bercovieri ATCC 43970]
 gi|238714700|gb|EEQ06702.1| High-affinity branched-chain amino acid transport system permease
           protein [Yersinia bercovieri ATCC 43970]
          Length = 405

 Score =  143 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 105/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    LIY+M   GL++VVG  GLL L     YAIGAY+Y +L   YGL
Sbjct: 80  WPFLVSRGSVDIATLTLIYIMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYYGL 139

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++   G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 140 GFWESLPLAGIVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 199

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  L+  +I  L
Sbjct: 200 SQIPKPTLFGLEFSRTAKDGGWDTFHNFFGLTYDPSDRIIFLYMVALLLVILTLFVINRL 259

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 260 LRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 319

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F E+  V++IV+LGGM S   +  A  IL+   EL   +N Y                 
Sbjct: 320 TFVESAFVLAIVVLGGMGSQFAVILAAVILVVSRELMRDLNAY---------------SM 364

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            L+   + L+++ R   LL ++ P   L+
Sbjct: 365 LLLGALMVLMMIWRPQGLLPMKRPQLKLK 393


>gi|22124339|ref|NP_667762.1| leucine/isoleucine/valine transporter permease subunit [Yersinia
           pestis KIM 10]
 gi|45442995|ref|NP_994534.1| leucine/isoleucine/valine transporter permease subunit [Yersinia
           pestis biovar Microtus str. 91001]
 gi|51594583|ref|YP_068774.1| leucine/isoleucine/valine transporter permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|108806216|ref|YP_650132.1| leucine/isoleucine/valine transporter permease subunit [Yersinia
           pestis Antiqua]
 gi|108810324|ref|YP_646091.1| leucine/isoleucine/valine transporter permease subunit [Yersinia
           pestis Nepal516]
 gi|145600673|ref|YP_001164749.1| leucine/isoleucine/valine transporter permease subunit [Yersinia
           pestis Pestoides F]
 gi|153997137|ref|ZP_02022270.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis CA88-4125]
 gi|165926333|ref|ZP_02222165.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939136|ref|ZP_02227687.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166011696|ref|ZP_02232594.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166213564|ref|ZP_02239599.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167401810|ref|ZP_02307298.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167421063|ref|ZP_02312816.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167426245|ref|ZP_02317998.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|170026183|ref|YP_001722688.1| leucine/isoleucine/valine transporter permease subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186893585|ref|YP_001870697.1| leucine/isoleucine/valine transporter permease subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|218930808|ref|YP_002348683.1| leucine/isoleucine/valine transporter permease subunit [Yersinia
           pestis CO92]
 gi|229837133|ref|ZP_04457298.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Yersinia pestis Pestoides A]
 gi|229839493|ref|ZP_04459652.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229900056|ref|ZP_04515193.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229900498|ref|ZP_04515627.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Yersinia pestis Nepal516]
 gi|270488853|ref|ZP_06205927.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
 gi|294505471|ref|YP_003569533.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis Z176003]
 gi|21957115|gb|AAM84013.1|AE013643_2 inner membrane permease of high-affinity branched-chain amino acid
           ABC transport system [Yersinia pestis KIM 10]
 gi|45437862|gb|AAS63411.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis biovar Microtus str. 91001]
 gi|51587865|emb|CAH19468.1| ABC type branched-chain aa transport system, permease [Yersinia
           pseudotuberculosis IP 32953]
 gi|108773972|gb|ABG16491.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis Nepal516]
 gi|108778129|gb|ABG12187.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis Antiqua]
 gi|115349419|emb|CAL22392.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis CO92]
 gi|145212369|gb|ABP41776.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis Pestoides F]
 gi|149289443|gb|EDM39521.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis CA88-4125]
 gi|165912909|gb|EDR31535.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165921857|gb|EDR39054.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165989465|gb|EDR41766.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166205237|gb|EDR49717.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166961192|gb|EDR57213.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167048703|gb|EDR60111.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167054764|gb|EDR64568.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169752717|gb|ACA70235.1| inner-membrane translocator [Yersinia pseudotuberculosis YPIII]
 gi|186696611|gb|ACC87240.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
 gi|229682517|gb|EEO78604.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Yersinia pestis Nepal516]
 gi|229686836|gb|EEO78915.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229695859|gb|EEO85906.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229706076|gb|EEO92085.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Yersinia pestis Pestoides A]
 gi|262363536|gb|ACY60257.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis D106004]
 gi|262367465|gb|ACY64022.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis D182038]
 gi|270337357|gb|EFA48134.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
 gi|294355930|gb|ADE66271.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis Z176003]
 gi|320013597|gb|ADV97168.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 428

 Score =  143 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 160/341 (46%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   +++          +    +    LIYVM   GL++VVG  GLL L     YAIGA
Sbjct: 91  LLAAVVIIAAVAWPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   YGL  W  +P++ + +   G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTYALLNHYYGLGFWESLPLAGITAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G             +   FF          IF+Y V L 
Sbjct: 211 NNTEITGGPNGISQIPKPTLFGLEFSRTAKDGGWDTFHNFFGLTYDPSHRIIFLYLVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 271 LVILTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y     
Sbjct: 331 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        L+   + L+++ R   LL ++ P   L+
Sbjct: 386 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 416


>gi|300310993|ref|YP_003775085.1| branched-chain amino acid ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300073778|gb|ADJ63177.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 408

 Score =  143 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 160/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A V  LL+   +      +    +    LIYV+   GL+IVVG  GLL L  V  YA+GA
Sbjct: 82  AAVMILLMAALVWPFFGSRGYVDVMTLALIYVVLGLGLNIVVGFAGLLDLGYVGFYAVGA 141

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +    +GL+ W  +P++A  S   G ++G P L+ RGDYLAI TL   EI + +L 
Sbjct: 142 YTYALCNQYFGLTFWECVPLAAAASALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLLN 201

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  G+    +    G  +          +  + F          IF+Y++ L 
Sbjct: 202 NMTSITGGPDGVSGIPKPTVFGLVMARNPVTEGGTTFHQLFGLSYQGGHMVIFLYFLALL 261

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           M   +  +   L R  +  AW  +R+++ A  SL       KLSAF + +AF G+AG+FF
Sbjct: 262 MVLFTYFVTSRLLRMPMGRAWEALREDEIACRSLGINPTKVKLSAFTLGAAFAGLAGSFF 321

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + EL      Y     
Sbjct: 322 AARQGLVTPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPELARSFAEY----- 376

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 377 ----------RMLIFGLVMVLMMMWRPQGLLPATRPHVELPQ 408


>gi|331004943|ref|ZP_08328355.1| Branched-chain amino acid transport system permease protein livM
           [gamma proteobacterium IMCC1989]
 gi|330421241|gb|EGG95495.1| Branched-chain amino acid transport system permease protein livM
           [gamma proteobacterium IMCC1989]
          Length = 424

 Score =  143 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 104/339 (30%), Positives = 161/339 (47%), Gaps = 24/339 (7%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L+L + +    S +    +   +LIYVM   GL+IVVG  GLL L  V  YA+GAYS
Sbjct: 98  MVGLILCVIIWPFMSSRGAIDLATLVLIYVMLGLGLNIVVGLAGLLDLGYVAFYAVGAYS 157

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L   +GLS W+ +P+  M++   G ++G P L+ RGDYLAI TL   EI + +L  +
Sbjct: 158 YALLSEYFGLSFWVALPIGGMLAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLNNF 217

Query: 141 KPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
             +T G  GI    +    G                       S     IF+Y + + + 
Sbjct: 218 TNLTGGPNGISDIPKPTLFGMEFGRRVKEEGNTLFHEVMGIAYSSSYKVIFLYILAVILV 277

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
             +  +I  L R  +  AW  +R+++ A  SL       KLSAF + +AF G AG FFAA
Sbjct: 278 IFTLFVIHRLMRMPVGRAWEALREDEIACRSLGLNRTAIKLSAFTIGAAFAGFAGCFFAA 337

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  ISP+ F F E+ I+++IV+LGGM S   +  A   +  + EL  G + Y       
Sbjct: 338 RQGFISPESFTFIESAIILAIVVLGGMGSQVGVILAAIAMTVLPELARGFDEY------- 390

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                      +  + + L+++ R   L   + P   ++
Sbjct: 391 --------RMLMFGLMMVLMMIWRPQGLAPAQRPHMEIK 421


>gi|310765693|gb|ADP10643.1| leucine/isoleucine/valine transporter permease subunit [Erwinia sp.
           Ejp617]
          Length = 424

 Score =  143 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 103/330 (31%), Positives = 163/330 (49%), Gaps = 24/330 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    LIYVM   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G+++G P L+ RGDYLAI TL   EI + +L+    +T G  GI
Sbjct: 163 GFWQCLPLAGLVAAAFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTELTGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  ++  +I  L
Sbjct: 223 SQIPKPTFFGLEFNRSVRDGGWDTFHHFFGLQYDPGDRIIFLYLVALLLVVVTLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG+ FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGSLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL   +N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            ++   + L+++ R   LL ++ P   L++
Sbjct: 388 LVLGGLMVLMMIWRPQGLLPMKRPHLKLKQ 417


>gi|120556244|ref|YP_960595.1| leucine/isoleucine/valine transporter permease subunit
           [Marinobacter aquaeolei VT8]
 gi|120326093|gb|ABM20408.1| L-isoleucine ABC transporter membrane protein / L-valine ABC
           transporter membrane protein / L-leucine ABC transporter
           membrane protein [Marinobacter aquaeolei VT8]
          Length = 423

 Score =  143 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 103/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+  +++          +    +   +LIYVM A GL++VVG  GLL L  V  YA+GAY
Sbjct: 96  VLTGIVVLALFWPFFVSRGAVDLATLVLIYVMLALGLNVVVGLAGLLDLGYVAFYAVGAY 155

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           ++ +L    G+S W+ +P+ A ++   G+++G P L+ RGDYLAI TL   EI + +L  
Sbjct: 156 TFALLSQYAGISFWMALPIGACLAALFGLVLGFPVLRLRGDYLAIVTLGFGEIIRILLNN 215

Query: 140 WKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           W  +T G  GI         G             S    F    S     IF+Y + L +
Sbjct: 216 WTAVTGGPNGIGGIPDPTLFGMEFGRRVREEGNTSFHETFGIAYSGEHKVIFLYLIALVL 275

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++A II    R  +  AW  +R+++ A  SL  +    KLSAF + + F G AG  FA
Sbjct: 276 AVITALIIRRFMRMPVGRAWEALREDEIAARSLGLSRTAVKLSAFTIGAFFAGFAGTVFA 335

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           + +  ISP+ F F E+ I+++IV+LGGM S   +  A   +  + EL    + Y      
Sbjct: 336 SKQGFISPESFVFLESAIILAIVVLGGMGSQLGVVLAAVAVTILPELAREFSDY------ 389

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                       +   A+ L+++ R   L+ +R     L R
Sbjct: 390 ---------RMLVFGAAMVLMMVWRPQGLMPMRRIHIELRR 421


>gi|27380783|ref|NP_772312.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27353948|dbj|BAC50937.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 441

 Score =  143 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 112/338 (33%), Positives = 178/338 (52%), Gaps = 19/338 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           LA    +   L      +Q+YI  + I +L YVM  WGL++VVG  GLL L  V  YA+G
Sbjct: 105 LAPALLIFTLLVPVIFYNQRYILDLAILVLTYVMLGWGLNVVVGLAGLLDLGYVAFYAVG 164

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYSY +L + +G S W+ +P++ +++   G+++G P L+ RGDYLAI TL   EI + ++
Sbjct: 165 AYSYGLLATNFGWSFWICLPLAGILAAFWGVLLGFPVLRLRGDYLAIVTLAFGEIIRLVI 224

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRF----FRFPSSFVIYEIFMYYVLLGMCFL 193
           I W+ +T G  G+    R  F G  + +             S     +F++Y++L +  L
Sbjct: 225 INWQSLTGGPNGVSGIPRPTFFGIPLDNSDDGLAAKLGIEYSATHRIVFLFYLILALALL 284

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  + + LRR  I  AW  +R+++ A  +L       KL+AFA  + F G AGAFFA  +
Sbjct: 285 TNWVTIRLRRLPIGRAWEALREDEVACRALGINTTTTKLTAFATGAMFGGFAGAFFATRQ 344

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             ISP+ F F E+ +V++IV+LGGM S   +A A   +IG  EL   +  Y         
Sbjct: 345 GFISPESFTFQESALVLAIVVLGGMGSQLGVALAALAMIGGFELFRSLETY--------- 395

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                    +  +A+ L+++ R   L+  R P+ +L +
Sbjct: 396 ------RMLVFGMAMVLIMIWRPRGLVGHRAPTVYLTK 427


>gi|153947847|ref|YP_001399243.1| leucine/isoleucine/valine transporter permease subunit [Yersinia
           pseudotuberculosis IP 31758]
 gi|152959342|gb|ABS46803.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pseudotuberculosis IP 31758]
          Length = 428

 Score =  143 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 160/341 (46%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   +++          +    +    LIYVM   GL++VVG  GLL L     YAIGA
Sbjct: 91  LLAAVVIIAAVAWPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   YGL  W  +P++ + +   G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTYALLNHYYGLGFWESLPLAGITAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G             +   FF          IF+Y V L 
Sbjct: 211 NNTEITGGPNGISQIPKPTLFGLEFSRTVKDGGWDTFHNFFGLTYDPSHRIIFLYLVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 271 LVILTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y     
Sbjct: 331 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        L+   + L+++ R   LL ++ P   L+
Sbjct: 386 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 416


>gi|313497499|gb|ADR58865.1| LivM [Pseudomonas putida BIRD-1]
          Length = 418

 Score =  143 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 107/340 (31%), Positives = 166/340 (48%), Gaps = 23/340 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+  L++   +      +    +   ILIYV+   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 94  VIIGLIVMALVWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           SY +L    G S W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L  
Sbjct: 154 SYAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 213

Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
               T G  GI    +  F G T         ++   FF    + +   IF+Y V L + 
Sbjct: 214 LTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTFHEFFGLQYNSINKVIFLYLVALLLA 273

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+  +I  L R  I  AW  +R+++ A  +L       KLSAF + + F G AG+FFAA
Sbjct: 274 LLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGACFAGFAGSFFAA 333

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  ++P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y       
Sbjct: 334 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSEY------- 386

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                      +    + L+++ R   LL ++ P   L R
Sbjct: 387 --------RMLMFGALMVLMMIWRPQGLLPMQRPHMELRR 418


>gi|238763653|ref|ZP_04624613.1| High-affinity branched-chain amino acid transport system permease
           protein [Yersinia kristensenii ATCC 33638]
 gi|238698131|gb|EEP90888.1| High-affinity branched-chain amino acid transport system permease
           protein [Yersinia kristensenii ATCC 33638]
          Length = 405

 Score =  142 bits (358), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   +++          +    +    LIYVM   GL++VVG  GLL L     YAIGA
Sbjct: 68  LLAAAIIIAAIAWPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 127

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   YGL  W  +P++ +++   G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 128 YTYALLNHYYGLGFWESLPLAGIVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 187

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G             +   FF          IF+Y V L 
Sbjct: 188 NNTEITGGPNGISQIPKPTLFGLEFSRTAKDGGWDTFHNFFGLTYDPSDRIIFLYLVALL 247

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 248 LVVLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLF 307

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y     
Sbjct: 308 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY----- 362

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        L+   + L+++ R   LL ++ P   L+
Sbjct: 363 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 393


>gi|194290216|ref|YP_002006123.1| leucine/isoleucine/valine transporter permease subunit [Cupriavidus
           taiwanensis LMG 19424]
 gi|193224051|emb|CAQ70060.1| high-affinity branched-chain amino acid transport protein (ABC
           superfamily, membrane) [Cupriavidus taiwanensis LMG
           19424]
          Length = 427

 Score =  142 bits (357), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 99/342 (28%), Positives = 159/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             V+ LL    +      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 101 VAVWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGYAGLLDLGYVGFYAVGG 160

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GL+ W  +P++A +S   G ++G P L+ RGDYLAI TL   EI + +L 
Sbjct: 161 YTYALLNQYFGLTFWECLPIAAAMSAGFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLLN 220

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  G+    +    G  +         R+         +     IF+Y + L 
Sbjct: 221 NLTSLTGGPDGVSGIPKPSVFGIEMARSASVEGTRTFHELIGLDYASQHMVIFLYLIALL 280

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +R+++ A  SL       KLSAF + ++F G+ GAFF
Sbjct: 281 LVGFTLFVTSRLIRMPMGRAWEALREDEIACRSLGLNPTRIKLSAFTLGASFAGLGGAFF 340

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ +V+++V+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 341 AARQGLVNPESFTFIESALVLAVVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 395

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L R
Sbjct: 396 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPR 427


>gi|297194986|ref|ZP_06912384.1| inner-membrane translocator [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197721908|gb|EDY65816.1| inner-membrane translocator [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 461

 Score =  142 bits (357), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 82/347 (23%), Positives = 147/347 (42%), Gaps = 28/347 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           + DK + L  +   L+L L + +   + +   +  QI I+ + A GL++V+G  GLL L 
Sbjct: 117 RTDKRVKLGGIAVLLILVLVIPSGLERSWQTVLVDQIAIFALLAIGLNVVIGWAGLLDLG 176

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL------PSLKFRGDYLA 123
               +A+GAYS      R  +   +++    +I  A    +        P+L+ RGDYLA
Sbjct: 177 FFAFFAVGAYSTAYWTGRLPIEPPVVLNNFWVIPVAVITCLICGLLLGAPTLRLRGDYLA 236

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           I TL   EI   +      +T G  G  +              I F      + I  +  
Sbjct: 237 IVTLGFHEIIYLVAKNADGLTGGPQGARLIPDFS---------IDFAGLEYKWSIKPLPY 287

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           +Y+L+    L   +   L  + +  AW  IR+++ A  +     +  KL AFA+ ++  G
Sbjct: 288 WYLLVFFIVLVIILFSRLEHSRVGRAWTAIREDEIAAAANGVNTVQFKLMAFAIGASTSG 347

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           +AG  F +    I+P++F   ++I++++ VI GGM S+  +   TAIL+ + E       
Sbjct: 348 VAGVIFTSKYGYINPEVFPLLQSILILAYVIFGGMGSIPGVLIGTAILVWLPEALKDWVD 407

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                               +   L ++++ R   +   R     L+
Sbjct: 408 -------------PSDRYMYLGALLVIMMIYRPQGVWPSRRRQRELK 441


>gi|170720342|ref|YP_001748030.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           putida W619]
 gi|169758345|gb|ACA71661.1| inner-membrane translocator [Pseudomonas putida W619]
          Length = 418

 Score =  142 bits (357), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 105/340 (30%), Positives = 166/340 (48%), Gaps = 23/340 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +      +    +   ILIYV+   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 94  IIIGLIVVALVWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           SY +L    G S W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L  
Sbjct: 154 SYAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 213

Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
               T G  GI    +    G T         ++   +F  P + +   IF+Y V L + 
Sbjct: 214 LTDWTGGPNGISNIPKPELFGLTFERRAAEGMQTFHEYFGLPYNSINKVIFLYLVALLLA 273

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+  +I  L R  I  AW  +R+++ A  +L       KLSAF + + F G AG+FFAA
Sbjct: 274 LLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGACFAGFAGSFFAA 333

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  ++P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y       
Sbjct: 334 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSEY------- 386

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                      +    + L+++ R   LL ++ P   L R
Sbjct: 387 --------RMLMFGALMVLMMIWRPQGLLPMQRPHMELRR 418


>gi|300721695|ref|YP_003710971.1| high-affinity branched-chain amino acid ABC transporter membrane
           protein [Xenorhabdus nematophila ATCC 19061]
 gi|297628188|emb|CBJ88743.1| high-affinity branched-chain amino acid transport protein (ABC
           superfamily, membrane) [Xenorhabdus nematophila ATCC
           19061]
          Length = 430

 Score =  142 bits (357), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 166/341 (48%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++  L+    + +  + +    +    LIY+M   GL+IVVG  GLL L     YAIGA
Sbjct: 97  IILILLVALAVIWSFIASRGSIDIATLTLIYIMLGLGLNIVVGLSGLLVLGYAGFYAIGA 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   YGL  W  +P++ + +   G+++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 157 YTYALLNHYYGLGFWQSLPLAGLTAALSGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G             +   FF          IF+Y V L 
Sbjct: 217 NNTELTGGPNGISQIPKPTLFGLEFNRSVKEGGWDTFHNFFGLKYDPSDRIIFLYLVALL 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  LS  II  L +  +  AW  +R+++ A  SL  +    KL+AF +S+AF G+AG  F
Sbjct: 277 LVLLSLFIIHRLLKMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGIAGTLF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ISP+ F F+E+  V++IV+LGGM S + +  +  IL+   E+   +N Y     
Sbjct: 337 AARQGFISPESFTFAESAFVLAIVVLGGMGSQTAVILSAIILVVSREMIRDLNEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        L+   + L+++ R   LL ++     L+
Sbjct: 392 ----------SMLLLGALMVLMMIWRPQGLLPMKRSQVELQ 422


>gi|37527943|ref|NP_931288.1| leucine/isoleucine/valine transporter permease subunit
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36787379|emb|CAE16468.1| High-affinity branched-chain amino acid transport system permease
           protein LivM [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 425

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 107/330 (32%), Positives = 160/330 (48%), Gaps = 24/330 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    LIYVM   GL++VVG  GLL L     YAIGAY+Y +L   YGL
Sbjct: 103 WPFIVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYAGFYAIGAYTYALLSHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ + +   G+++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWQSLPLAGLTAALSGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V+L +  L+  II  L
Sbjct: 223 SQIPKPTFFGLEFNRSVKEGGWDTFHNFFGLKYDPSDRVIFLYLVVLLLVILTVLIINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPTRIKLAAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S + +  A  +L+   E+   +N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQTAVILAAILLVVSREMMRDLNAY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            L+   + L+++ R   LL  +     LER
Sbjct: 388 LLLGAMMVLMMIWRPQGLLPTKRRHVKLER 417


>gi|315655907|ref|ZP_07908805.1| ABC superfamily ATP binding cassette transporter [Mobiluncus
           curtisii ATCC 51333]
 gi|315489971|gb|EFU79598.1| ABC superfamily ATP binding cassette transporter [Mobiluncus
           curtisii ATCC 51333]
          Length = 616

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 71/336 (21%), Positives = 136/336 (40%), Gaps = 43/336 (12%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++  V   L +  +       Y+ +  + I + ++ A  L++V G  G  SL      A
Sbjct: 12  AVILAVLWGLGYALITVGVIDSYVFNTMVTICVNIILAVSLNLVTGFTGQFSLGHAGFMA 71

Query: 76  IGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +GAYS  ++ +        +  + V  + + + G ++GLP+L+ +GDYLAIATL M+EI 
Sbjct: 72  VGAYSTGLIVTAIPTYGGFFWGLFVGGIFAASIGFLIGLPTLRLKGDYLAIATLGMAEII 131

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           + +L+  +                                  F+  +   + +L  +   
Sbjct: 132 RVLLLNLEFSGGAA--------------------------GLFIQLQFTDWNILFILTAG 165

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  +I     +   ++   +R+++ A  S+       K  AF V S F  + G  +  + 
Sbjct: 166 TIVLIRNFLDSRHGHSCIAVREDEIAAESIGVYSTRIKTLAFVVGSFFGAVGGGLYIGNF 225

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             + PD+F F  +I ++ IV+LGG+ SL+    A  +L  V  L                
Sbjct: 226 FFVKPDLFNFMMSINILVIVVLGGLGSLTGSIIAAILLAVVSTLLQ-------------- 271

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
             F      L  + L ++++ R   LL  +  S  +
Sbjct: 272 -PFPEIRMILYALVLVILMVFRPQGLLGTKELSFKV 306


>gi|113868585|ref|YP_727074.1| leucine/isoleucine/valine transporter permease subunit [Ralstonia
           eutropha H16]
 gi|113527361|emb|CAJ93706.1| ABC-type transporter, permease component: HAAT family [Ralstonia
           eutropha H16]
          Length = 427

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 99/342 (28%), Positives = 158/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A V+ LL    +      +    +    LIYV+   GL+IVVG  GLL L  V  YAIG 
Sbjct: 101 AAVWMLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGYAGLLDLGYVGFYAIGG 160

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GL  W  +P++A +S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 161 YTYALLNQYFGLGFWECLPIAAAMSATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 220

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  G+    +    G  +          +      +  S     IF+Y + L 
Sbjct: 221 NLTSLTGGPDGVSGIPKPTVFGIEMARSASVEGAKTFHDLLGWDYSGQHMVIFLYLLALL 280

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + ++F G+ GAFF
Sbjct: 281 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 340

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ +++++V+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 341 AARQGLVNPESFTFIESALILAVVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 395

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 396 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 427


>gi|325275262|ref|ZP_08141219.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           sp. TJI-51]
 gi|324099603|gb|EGB97492.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           sp. TJI-51]
          Length = 418

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 108/340 (31%), Positives = 167/340 (49%), Gaps = 23/340 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+  L++   +      +    +   ILIYV+   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 94  VIMGLIVAALVWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           SY +L    G S W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L  
Sbjct: 154 SYAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 213

Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
               T G  GI    +  F G T         ++   FF  P + +   IF+Y V L + 
Sbjct: 214 LTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTFHEFFGLPYNSINKVIFLYLVALLLA 273

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+  +I  L R  I  AW  +R+++ A  +L       KLSAF + + F G AG+FFAA
Sbjct: 274 LLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGACFAGFAGSFFAA 333

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  ++P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y       
Sbjct: 334 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSEY------- 386

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                      +    + L+++ R   LL ++ P   L R
Sbjct: 387 --------RMLMFGALMVLMMIWRPQGLLPMQRPHMELRR 418


>gi|148256625|ref|YP_001241210.1| high-affinity branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. BTAi1]
 gi|146408798|gb|ABQ37304.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 446

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 119/338 (35%), Positives = 182/338 (53%), Gaps = 19/338 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           LA    +   L      +Q+YI  +GI +L YVM  WGL++VVG  GLL L  V  YA+G
Sbjct: 110 LAPALLIFTLLVPVIFYNQRYILDLGILVLTYVMLGWGLNVVVGLAGLLDLGYVAFYAVG 169

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYSY +L + +GLS W+ +P++ +++   G+++G P L+ RGDYLAI TL   EI + +L
Sbjct: 170 AYSYGLLSTTFGLSFWICLPLAGILAAFWGVLLGFPVLRLRGDYLAIVTLAFGEIIRLVL 229

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIR----FFRFPSSFVIYEIFMYYVLLGMCFL 193
           I W+ +T G  GI    R    G  +             P S     +F++Y++L +  L
Sbjct: 230 INWQDVTGGPNGISGIPRPSLFGIPLTPGPDGLAAMLGIPFSPTHRIVFLFYLILALALL 289

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  + + LRR  I  AW  +R+++ A  +L   I   KL+AFA  + F G AGAFFA  +
Sbjct: 290 TNWVTIRLRRLPIGRAWEALREDEVACRALGINITTTKLTAFATGAMFGGFAGAFFATRQ 349

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             ISP+ F F E+ +V++IV+LGGM S   +A A   +IG  EL   +  Y         
Sbjct: 350 GFISPESFTFQESALVLAIVVLGGMGSQLGVALAALAMIGGFELFRSLEVY--------- 400

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                    +  +A+ LV++ R   ++  R+P+ FLE+
Sbjct: 401 ------RMLVFGLAMVLVMIWRPRGIVGHRSPTVFLEK 432


>gi|330949947|gb|EGH50207.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae Cit 7]
          Length = 421

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 108/338 (31%), Positives = 168/338 (49%), Gaps = 23/338 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L++  F+      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAYS
Sbjct: 94  LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L   YGL  W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L   
Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213

Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             IT G  GI   ++    G T         ++   FF  P + +   IF+Y + L +  
Sbjct: 214 TDITGGPNGISNIEKPTLFGLTFERKAAEGMQTFHEFFGLPYNSINKVIFLYLIALLLAL 273

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +  +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG+FFAA 
Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  I+P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y        
Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                     +    + L+++ R    L ++ P   L+
Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416


>gi|315656167|ref|ZP_07909058.1| ABC superfamily ATP binding cassette transporter [Mobiluncus
           curtisii subsp. holmesii ATCC 35242]
 gi|315493169|gb|EFU82769.1| ABC superfamily ATP binding cassette transporter [Mobiluncus
           curtisii subsp. holmesii ATCC 35242]
          Length = 616

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 72/331 (21%), Positives = 134/331 (40%), Gaps = 43/331 (12%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++  V   L +  +       YI +  + I + ++ A  L++V G  G  SL      A
Sbjct: 12  AIILAVLWGLGYALITVGVIDSYIFNTMVTICVNIILAVSLNLVTGFTGQFSLGHAGFMA 71

Query: 76  IGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +GAYS  ++ +        +  + V  + + + G ++GLP+L+ +GDYLAIATL M+EI 
Sbjct: 72  VGAYSTGLIVTAIPTYGGFFWGLFVGGIFAASIGFLIGLPTLRLKGDYLAIATLGMAEII 131

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           + +L+  +                                  F+  +   + +L  +   
Sbjct: 132 RVLLLNLEFSGGAA--------------------------GLFIQLQFTDWNILFILTAG 165

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  +I     +   ++   IR+++ A  S+       K  AF V S F  + G  +  + 
Sbjct: 166 TIVLIRNFLDSRHGHSCIAIREDEIAAESIGVYSTRIKTLAFVVGSFFGAVGGGLYIGNF 225

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             + PD+F F  +I ++ IV+LGG+ SL+    A  +L  V  L                
Sbjct: 226 FFVKPDLFNFMMSINILVIVVLGGLGSLTGSIIAAILLAVVSTLLQ-------------- 271

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             F      L  + L ++++ R   LL  + 
Sbjct: 272 -PFPEIRMILYALVLVILMVFRPQGLLGTKE 301


>gi|271502542|ref|YP_003335568.1| inner-membrane translocator [Dickeya dadantii Ech586]
 gi|270346097|gb|ACZ78862.1| inner-membrane translocator [Dickeya dadantii Ech586]
          Length = 426

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 100/328 (30%), Positives = 155/328 (47%), Gaps = 23/328 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY+Y +L   YGL
Sbjct: 103 WPFVVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLSHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ + +   G ++G P L+ RGDYLAI TL   EI + +L+     T G  GI
Sbjct: 163 GFWQCLPLAGLTAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTGFTGGPNGI 222

Query: 151 YVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
               +  F G            +   FF          IF+Y V L +  L+  +I  L 
Sbjct: 223 SQIPKPTFFGLEFNRTAQGSWDTFHHFFGLRYDPSDRIIFLYMVALLLVVLTLFVINRLL 282

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F 
Sbjct: 283 RMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLFAARQGFVSPESFT 342

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y                  
Sbjct: 343 FVESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY---------------SML 387

Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLE 350
           ++   + L+++ R   LL ++     L+
Sbjct: 388 VLGALMVLMMIWRPQGLLPMKRTQIKLQ 415


>gi|298345501|ref|YP_003718188.1| branched subunit amino acid ABC transporter [Mobiluncus curtisii
           ATCC 43063]
 gi|298235562|gb|ADI66694.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter [Mobiluncus curtisii ATCC 43063]
          Length = 616

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 72/331 (21%), Positives = 134/331 (40%), Gaps = 43/331 (12%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++  V   L +  +       YI +  + I + ++ A  L++V G  G  SL      A
Sbjct: 12  AIILAVLWGLGYALITVGVIDSYIFNTMVTICVNIILAVSLNLVTGFTGQFSLGHAGFMA 71

Query: 76  IGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +GAYS  ++ +        +  + V  + + + G ++GLP+L+ +GDYLAIATL M+EI 
Sbjct: 72  VGAYSTGLIVTAIPTYGGFFWGLFVGGIFAASIGFLIGLPTLRLKGDYLAIATLGMAEII 131

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           + +L+  +                                  F+  +   + +L  +   
Sbjct: 132 RVLLLNLEFSGGAA--------------------------GLFIQLQFTDWNILFILTAG 165

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  +I     +   ++   IR+++ A  S+       K  AF V S F  + G  +  + 
Sbjct: 166 TIVLIRNFLDSRHGHSCIAIREDEIAAESIGVYSTRIKTLAFVVGSFFGAVGGGLYIGNF 225

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             + PD+F F  +I ++ IV+LGG+ SL+    A  +L  V  L                
Sbjct: 226 FFVKPDLFNFMMSINILVIVVLGGLGSLTGSIIAAILLAVVSTLLQ-------------- 271

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             F      L  + L ++++ R   LL  + 
Sbjct: 272 -PFPEIRMILYALVLVILMVFRPQGLLGTKE 301


>gi|167722718|ref|ZP_02405954.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia pseudomallei DM98]
          Length = 423

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 159/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V+ L+   F+      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 97  VIVWALVALGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GLS W  +P+SA+ S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 157 YTYALLNQHFGLSFWECLPLSALASATFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 217 NLTSITGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELVGLEYSGEHVVIFLYLIALV 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + ++F G+ GAFF
Sbjct: 277 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEVARGFAEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 423


>gi|28871252|ref|NP_793871.1| high-affinity branched-chain amino acid ABC transporter permease
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|28854502|gb|AAO57566.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|331015725|gb|EGH95781.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 421

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 107/338 (31%), Positives = 169/338 (50%), Gaps = 23/338 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L++  F+      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAYS
Sbjct: 94  LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L   YGL  W+ +P++ M++   G ++G P L+ RGDYLAI TL   EI +  L   
Sbjct: 154 YALLSHYYGLGFWICLPIAGMMAAVFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213

Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             +T G  GI   D+  F G T         ++   +F  P + +   +F+Y + L +  
Sbjct: 214 TELTGGPNGISNIDKPTFFGLTFERKAAEGMQTFHEYFGLPYNSINKVVFLYLIALLLAL 273

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +  +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG+FFAA 
Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y        
Sbjct: 334 QGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                     +    + L+++ R    L ++ P   L+
Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416


>gi|213971397|ref|ZP_03399511.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas syringae pv. tomato T1]
 gi|301383583|ref|ZP_07232001.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. tomato Max13]
 gi|302059990|ref|ZP_07251531.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. tomato K40]
 gi|302132071|ref|ZP_07258061.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213923840|gb|EEB57421.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas syringae pv. tomato T1]
          Length = 421

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 107/338 (31%), Positives = 169/338 (50%), Gaps = 23/338 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L++  F+      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAYS
Sbjct: 94  LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L   YGL  W+ +P++ M++   G ++G P L+ RGDYLAI TL   EI +  L   
Sbjct: 154 YALLSHYYGLGFWVCLPIAGMMAAVFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213

Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             +T G  GI   D+  F G T         ++   +F  P + +   +F+Y + L +  
Sbjct: 214 TELTGGPNGISNIDKPTFFGLTFERKAAEGMQTFHEYFGLPYNSINKVVFLYLIALLLAL 273

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +  +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG+FFAA 
Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y        
Sbjct: 334 QGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                     +    + L+++ R    L ++ P   L+
Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416


>gi|271964460|ref|YP_003338656.1| branched-chain amino acid ABC transporter permease
           [Streptosporangium roseum DSM 43021]
 gi|270507635|gb|ACZ85913.1| ABC-type branched-chain amino acid transport system permease
           component-like protein [Streptosporangium roseum DSM
           43021]
          Length = 389

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 82/349 (23%), Positives = 148/349 (42%), Gaps = 23/349 (6%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQK--YIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +   +   L V   LL    +G   S    +   +   I  YV+ A GL++VVG  GLL 
Sbjct: 32  QRWILYVALIVGALLLPSESIGGFMSPYTDWASILFFPIGTYVILAIGLNVVVGQAGLLD 91

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L  V  YA+G Y+  ++G+R G + WL++ V   I    G+ +G P+L+ RGDYLAI TL
Sbjct: 92  LGFVAFYAVGGYAMALIGTRLGWNFWLILVVGIGICALSGITLGGPTLRLRGDYLAIVTL 151

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS-----FVIYEIF 182
              EI +        I  G  GI        +       +  +           V+    
Sbjct: 152 GFGEIIRITARNTDAI-GGPNGIRGIPHPPSIDELTIFGVDVYELLGVKIFKYGVLDPRP 210

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            YY+L+ +  ++  ++    ++ +  AW  IR+++ A   +       K+ AFA+ ++  
Sbjct: 211 YYYLLVALAVVAIILVKRWEKSRVGRAWAAIREDEDAAEVMGVPTFRFKMLAFAIGASIG 270

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G  G  +A+    ++P+ F+F  +  +++ V++GG  +L  +     ++  + E   G+ 
Sbjct: 271 GAMGVLWASKVISLNPNDFQFLLSATILAAVVMGGAGNLPGVMLGAFVVAWLPERFRGLQ 330

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            Y                  +    L  +++ R   LL  R     L+ 
Sbjct: 331 EY---------------RMLIFGAVLVALMIFRPEGLLPSRQRKAELKE 364


>gi|123440624|ref|YP_001004618.1| leucine/isoleucine/valine transporter permease subunit [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122087585|emb|CAL10366.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia enterocolitica subsp. enterocolitica
           8081]
          Length = 428

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   +++          +    +    LIYVM   GL++VVG  GLL L     YAIGA
Sbjct: 91  LLAAAIIIAAIAWPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   YGL  W  +P++ +++   G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTYALLNHYYGLGFWESLPLAGIVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G             +   FF          IF+Y V L 
Sbjct: 211 NNTEITGGPNGISQIPKPTLFGLEFSRTAKDGGWDTFHNFFGLTYDPSDRIIFLYMVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 271 LVILTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y     
Sbjct: 331 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        L+   + L+++ R   LL ++ P   L+
Sbjct: 386 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 416


>gi|76818367|ref|YP_337291.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia pseudomallei 1710b]
 gi|161723220|ref|YP_110598.2| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia pseudomallei K96243]
 gi|167827253|ref|ZP_02458724.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia pseudomallei 9]
 gi|167897337|ref|ZP_02484739.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia pseudomallei 7894]
 gi|167905696|ref|ZP_02492901.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia pseudomallei NCTC 13177]
 gi|167914002|ref|ZP_02501093.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia pseudomallei 112]
 gi|167921914|ref|ZP_02509005.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia pseudomallei BCC215]
 gi|76582840|gb|ABA52314.1| high-affinity branched-chain amino acid transport system permease
           protein [Burkholderia pseudomallei 1710b]
          Length = 423

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 160/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+V+ L+   F+      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 97  AIVWALVALGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GLS W  +P+SA+ S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 157 YTYALLNQYFGLSFWECLPLSALASATFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 217 NLTSITGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELVGLEYSGEHVVIFLYLIALV 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + ++F G+ GAFF
Sbjct: 277 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEVARGFAEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 423


>gi|226944074|ref|YP_002799147.1| leucine/isoleucine/valine transporter permease subunit [Azotobacter
           vinelandii DJ]
 gi|226719001|gb|ACO78172.1| high affinity branched chain amino acid ABC transporter, permease
           component [Azotobacter vinelandii DJ]
          Length = 418

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 106/328 (32%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               + +    +   ILIY M   GL+IVVG  GLL L  V  YA+GAY+Y +L   +GL
Sbjct: 105 WPFLASRGAVDLATLILIYAMLGLGLNIVVGLAGLLDLGYVGFYAVGAYTYALLSQHFGL 164

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++  ++   G ++G P L+ RGDYLAI TL   EI + +L     +T G  GI
Sbjct: 165 GFWTCLPIAGAMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRNLTELTGGPNGI 224

Query: 151 YVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
              DR  F G T         ++   FF  P       IF+Y + L +  L+  +I  L 
Sbjct: 225 GGIDRPTFFGLTFERRAPEGLQTFHGFFGLPYDSADKVIFLYLIALSLVLLTLFVINRLL 284

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R  I  AW  +R+++ A  +L       KLSAF + + F G AG+FFAA +  ++P+ F 
Sbjct: 285 RMPIGRAWEALREDEIACRALGLNPTAIKLSAFTLGACFAGFAGSFFAARQGLVTPESFT 344

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F E+ ++++IV+LGGM S   +  A  ++I + EL    + Y                  
Sbjct: 345 FIESAVILAIVVLGGMGSQLGVILAAMVMILLPELMREFSEY---------------RML 389

Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLE 350
           L    L L+++ R   LL ++ P   L+
Sbjct: 390 LFGALLVLMMVWRPQGLLPMQRPHLELK 417


>gi|332704340|ref|ZP_08424428.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332554489|gb|EGJ51533.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 415

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 94/334 (28%), Positives = 159/334 (47%), Gaps = 26/334 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A +  L     +       Y  ++    ++YV+   GL+IVVG  GLL L  V  YA+G
Sbjct: 90  VAALAILATVAVVFPLVFSTYQTNIMTSTMLYVVLGLGLNIVVGLAGLLDLGYVAFYAVG 149

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+Y +L   +GL  W ++PV A++    G+++G P L+ RGDYLAI TL    I + +L
Sbjct: 150 AYAYALLNYHFGLGFWTVLPVGALLGALFGLMLGFPVLRLRGDYLAIVTLGFGSIIRLVL 209

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
             W   + G +GI    R  F                +      ++YY++LG+  ++  +
Sbjct: 210 ENWNEFSKGPSGISNIARPGFF-----------GMNFTVSESVTYLYYIMLGLVLVTILV 258

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L+ + I  AW  +R+++ A  ++    +  KL AFA+ + + G+AG  FAA    I+
Sbjct: 259 VNRLKESRIGRAWMALREDEIACQAMGIDKMKTKLLAFALGATWAGIAGVVFAAKTTFIN 318

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F F E+  ++SIV+LGGM S+  +     ILI + E     + Y             
Sbjct: 319 PASFTFLESAFILSIVVLGGMGSILGVILGAFILILLPEYMRAFSEY------------- 365

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                L    + LV++ R   L++ +     ++ 
Sbjct: 366 --RMLLFGAIMVLVMVFRPQGLVKFQRRHYEVKE 397


>gi|126444849|ref|YP_001061863.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia pseudomallei 668]
 gi|226194898|ref|ZP_03790489.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei Pakistan 9]
 gi|237509067|ref|ZP_04521782.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Burkholderia pseudomallei MSHR346]
 gi|254182336|ref|ZP_04888931.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 1655]
 gi|254187397|ref|ZP_04893910.1| high-affinity branched-chain amino acid transport protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254198714|ref|ZP_04905134.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei S13]
 gi|254262943|ref|ZP_04953808.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 1710a]
 gi|126224340|gb|ABN87845.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 668]
 gi|157935078|gb|EDO90748.1| high-affinity branched-chain amino acid transport protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|169655453|gb|EDS88146.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei S13]
 gi|184212872|gb|EDU09915.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 1655]
 gi|225932703|gb|EEH28699.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei Pakistan 9]
 gi|235001272|gb|EEP50696.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Burkholderia pseudomallei MSHR346]
 gi|254213945|gb|EET03330.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 1710a]
          Length = 427

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 160/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+V+ L+   F+      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 101 AIVWALVALGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 160

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GLS W  +P+SA+ S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 161 YTYALLNQYFGLSFWECLPLSALASATFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 220

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 221 NLTSITGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELVGLEYSGEHVVIFLYLIALV 280

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + ++F G+ GAFF
Sbjct: 281 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 340

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 341 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEVARGFAEY----- 395

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 396 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 427


>gi|134284144|ref|ZP_01770837.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 305]
 gi|134244462|gb|EBA44567.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 305]
          Length = 427

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 160/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+V+ L+   F+      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 101 AIVWALVALGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 160

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GLS W  +P+SA+ S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 161 YTYALLNQYFGLSFWECLPLSALASATFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 220

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 221 NLTSITGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELVGLEYSGEHVVIFLYLIALV 280

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + ++F G+ GAFF
Sbjct: 281 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 340

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 341 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEVARGFAEY----- 395

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 396 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 427


>gi|304391057|ref|ZP_07373009.1| ABC superfamily ATP binding cassette transporter [Mobiluncus
           curtisii subsp. curtisii ATCC 35241]
 gi|304325940|gb|EFL93186.1| ABC superfamily ATP binding cassette transporter [Mobiluncus
           curtisii subsp. curtisii ATCC 35241]
          Length = 616

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 72/331 (21%), Positives = 134/331 (40%), Gaps = 43/331 (12%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++  V   L +  +       YI +  + I + ++ A  L++V G  G  SL      A
Sbjct: 12  AIILAVLWGLGYALITVGVIDSYIFNTMVTICVNIILAVSLNLVTGFTGQFSLGHAGFMA 71

Query: 76  IGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +GAYS  ++ +        +  + V  + + + G ++GLP+L+ +GDYLAIATL M+EI 
Sbjct: 72  VGAYSTGLIVTAIPTYGGFFWGLFVGGIFAASIGFLIGLPTLRLKGDYLAIATLGMAEII 131

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           + +L+  +                                  F+  +   + +L  +   
Sbjct: 132 RVLLLNLEFSGGAA--------------------------GLFIQLQFTDWNILFILTAG 165

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  +I     +   ++   IR+++ A  S+       K  AF V S F  + G  +  + 
Sbjct: 166 TIVLIRNFLDSRHGHSCIAIREDEIAAESIGVYSTRIKTLAFVVGSFFGAVGGGLYIGNF 225

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             + PD+F F  +I ++ IV+LGG+ SL+    A  +L  V  L                
Sbjct: 226 FFVKPDLFNFMMSINILVIVVLGGLGSLTGSIIAAILLAVVSTLLQ-------------- 271

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             F      L  + L ++++ R   LL  + 
Sbjct: 272 -PFPEIRMILYALVLVILMVFRPQGLLGTKE 301


>gi|317126276|ref|YP_004100388.1| inner-membrane translocator [Intrasporangium calvum DSM 43043]
 gi|315590364|gb|ADU49661.1| inner-membrane translocator [Intrasporangium calvum DSM 43043]
          Length = 370

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 86/332 (25%), Positives = 140/332 (42%), Gaps = 32/332 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             I   L     + + L +    S  Y   +    LI+VM A GL++VVG  GLL L   
Sbjct: 49  RAISHPLFAWAVVAMALAMPFINSSAYAIRISTDALIFVMLAVGLNVVVGYCGLLDLGYA 108

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +AIGAY+  IL + +   I L +P   + +   G+++G P+L+ R DYLAI TL   E
Sbjct: 109 AFFAIGAYTSGILATAFDWHIALTLPFVIVAAVIGGLLIGGPTLRLRSDYLAIVTLGFGE 168

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +         T G  GI+                    F S  +  +I  Y+V   + 
Sbjct: 169 IIRITANNL-DFTGGPNGIFGIP----------------DFGSFGLRTDIATYWVTAAVV 211

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+      + R  +  AWR +R+++ A  ++       K +A+   + F G+AG  FAA
Sbjct: 212 SLAVLASARIGRGRLGRAWRFVREDEDAAEAMGIHTYKIKFAAYITGAIFGGLAGVLFAA 271

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  ISP  F F  + +++  V+LGGM S   +     ++  + EL  G           
Sbjct: 272 HQTAISPMSFNFLWSALILMAVVLGGMGSTPGVVVGALVIALLPELLRG----------- 320

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                      +  + L +V++ R   +   R
Sbjct: 321 ----AENWRYLVFGVLLIVVMIFRPQGIWPHR 348


>gi|149375743|ref|ZP_01893511.1| leucine/isoleucine/valine transporter permease subunit
           [Marinobacter algicola DG893]
 gi|149359868|gb|EDM48324.1| leucine/isoleucine/valine transporter permease subunit
           [Marinobacter algicola DG893]
          Length = 423

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 101/341 (29%), Positives = 163/341 (47%), Gaps = 24/341 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  +++   +    + +    +   +LIY+M A GL++VVG  GLL L  V  YA+GAY
Sbjct: 96  LLTLMIIGALVWPFIASRGAVDLSTLVLIYIMLALGLNVVVGLAGLLDLGYVAFYAVGAY 155

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           ++ +L   YG+S W  +P+ A+++   G+++G P L+ RGDYLAI TL   EI + +L  
Sbjct: 156 TFALLSQYYGVSFWFALPIGALLAALFGLVLGFPVLRLRGDYLAIVTLGFGEIIRILLNN 215

Query: 140 WKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190
              +T G  GI         G             S    F    S     IF+Y + L +
Sbjct: 216 MTNLTGGPNGIGGIPDPTLFGMEFGRRVKEEGNTSFHETFGIAYSGEHKVIFLYLIALVL 275

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++A  I  L R  +  AW  +R+++ A  SL       KLSAF + + F G AG  FA
Sbjct: 276 AVITAIAIRRLMRMPVGRAWEALREDEIAAKSLGLNRTAVKLSAFTIGAFFAGFAGTVFA 335

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           + +  ISP+ F F E+ I+++IV+LGGM S   +  A   +  + EL    + Y      
Sbjct: 336 SKQGFISPESFVFLESAIILAIVVLGGMGSQMGVILAAIAVTILPELAREFSEY------ 389

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                       +   A+ L+++ R   LL +R     L++
Sbjct: 390 ---------RMLIFGAAMVLMMVWRPQGLLPMRRIHIELKK 421


>gi|307128898|ref|YP_003880914.1| leucine/isoleucine/valine ABC transporter membrane protein [Dickeya
           dadantii 3937]
 gi|306526427|gb|ADM96357.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Dickeya dadantii 3937]
          Length = 424

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 24/331 (7%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                   +    +    +IY++   GL++VVG  GLL L     YAIGAY+Y +L   Y
Sbjct: 101 VAWPFVVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLSHYY 160

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           GL  W  +P++ + +   G ++G P L+ RGDYLAI TL   EI + +L+     T G  
Sbjct: 161 GLGFWQCLPLAGLTAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTGFTGGPN 220

Query: 149 GIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           GI    +  F G             +   FF          IF+Y V L +  L+  +I 
Sbjct: 221 GISQIPKPTFFGLEFSRSPREGGWDTFHHFFGLTYDPSDRIIFLYMVALLLVLLTLFVIN 280

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+
Sbjct: 281 RLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLFAARQGFVSPE 340

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y               
Sbjct: 341 SFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY--------------- 385

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              L+   + L+++ R   LL ++     L+
Sbjct: 386 SMLLLGALMVLMMIWRPQGLLPMKRTQIKLQ 416


>gi|332159857|ref|YP_004296434.1| leucine/isoleucine/valine transporter permease subunit [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318607598|emb|CBY29096.1| branched-chain amino acid transport system permease protein LivM
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325664087|gb|ADZ40731.1| leucine/isoleucine/valine transporter permease subunit [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330862612|emb|CBX72765.1| high-affinity branched-chain amino acid transport system permease
           protein livM [Yersinia enterocolitica W22703]
          Length = 428

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   +++          +    +    LIYVM   GL++VVG  GLL L     YAIGA
Sbjct: 91  LLAAAIIIAAIAWPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   YGL  W  +P++ +++   G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTYALLNHYYGLGFWESLPLAGIVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G             +   FF          IF+Y V L 
Sbjct: 211 NNTEITGGPNGISQIPKPTLFGLEFSRTAKDGGWDTFHNFFGLTYDPSDRIIFLYMVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 271 LVILTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y     
Sbjct: 331 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        L+   + L+++ R   LL ++ P   L+
Sbjct: 386 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 416


>gi|50123259|ref|YP_052426.1| leucine/isoleucine/valine transporter permease subunit
           [Pectobacterium atrosepticum SCRI1043]
 gi|49613785|emb|CAG77236.1| high-affinity branched-chain amino acid transport system permease
           protein [Pectobacterium atrosepticum SCRI1043]
          Length = 424

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 108/329 (32%), Positives = 158/329 (48%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    LIYVM   GL++VVG  GLL L     YAIGAY+Y +L   YGL
Sbjct: 103 WPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ M +   G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWESLPLAGMAAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  L+  +I  L
Sbjct: 223 SQIPKPTFFGLEFGRNARDGGWDTFHNFFGLQYDPSDRIIFLYLVALLLVILTLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +RD++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALRDDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL   +N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            L+   + L+++ R   LL ++ P   L+
Sbjct: 388 LLLGALMVLMMIWRPQGLLPMKRPEMKLK 416


>gi|254299839|ref|ZP_04967287.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 406e]
 gi|157809700|gb|EDO86870.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 406e]
          Length = 427

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 159/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+V+ L+   F+      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 101 AIVWALVALGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 160

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GLS W  +P+SA+ S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 161 YTYALLNQYFGLSFWECLPLSALASATFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 220

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G  +          +         S     IF+Y   L 
Sbjct: 221 NLTSITGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELVGLEYSGEHVVIFLYLTALV 280

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + ++F G+ GAFF
Sbjct: 281 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 340

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 341 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEVARGFAEY----- 395

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 396 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 427


>gi|300787992|ref|YP_003768283.1| branched-chain amino acid ABC transporter permease [Amycolatopsis
           mediterranei U32]
 gi|299797506|gb|ADJ47881.1| permease component of ABC-type branched-chain amino acid transport
           system [Amycolatopsis mediterranei U32]
          Length = 385

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 89/345 (25%), Positives = 146/345 (42%), Gaps = 17/345 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQ-ILIYVMFAWGLSIVVGSLGLL 66
             +Y   + L+     L                S+ I  I  Y++ A GL+IVVG  G+L
Sbjct: 32  WQRYLLYIALIVFALILPAPWIGSFMSPASDWTSVLIFPIGTYILLAIGLNIVVGLAGML 91

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L  V  +AIGAY+  I G+++G ++W  I V  +++   G+I+G P+L+ RGDYLAI T
Sbjct: 92  DLGFVAFFAIGAYTVAIFGTKFGWNVWPTILVGIVLAAVSGVILGAPTLRLRGDYLAIVT 151

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI +           G  GI                     F   F++     YY+
Sbjct: 152 LGFGEIVRITANN-TNSIGGARGITNIPHPS------------PIFGMEFLLDPAPYYYL 198

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L    L     + L+++ +  AW  IR+++ A   +       KL AFA+ +   G AG
Sbjct: 199 ILVAIVLVIVFSVRLQKSRVGRAWAAIREDEDAAELMGVPTFKFKLLAFAIGAMIGGFAG 258

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             +A+    I+PD F F  +  +++ V+LGG  +L  +     ++  + E    +    +
Sbjct: 259 GIYASKAVFIAPDNFPFILSATILAAVVLGGAGNLPGVILGAFLVAWIPERLRSVE---W 315

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
              L  D         L    L L++ +R   +L  R     L  
Sbjct: 316 LRHLLGDKDPAEYRILLFGAVLVLMMALRPEGILPSRQRKAELRE 360


>gi|66047074|ref|YP_236915.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. syringae B728a]
 gi|63257781|gb|AAY38877.1| inner-membrane translocator [Pseudomonas syringae pv. syringae
           B728a]
          Length = 421

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 109/338 (32%), Positives = 169/338 (50%), Gaps = 23/338 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L++  F+      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAYS
Sbjct: 94  LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L   YGL  W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L   
Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213

Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             IT G  GI   ++  F G T         ++   FF  P + +   IF+Y + L +  
Sbjct: 214 TDITGGPNGISNIEKPTFFGLTFERKAAEGMQTFHEFFGLPYNSINKVIFLYLIALLLAL 273

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +  +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG+FFAA 
Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  I+P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y        
Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                     +    + L+++ R    L ++ P   L+
Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416


>gi|104780489|ref|YP_606987.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           entomophila L48]
 gi|95109476|emb|CAK14177.1| high-affinity branched-chain amino acid transport protein
           [Pseudomonas entomophila L48]
          Length = 418

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 106/340 (31%), Positives = 166/340 (48%), Gaps = 23/340 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+  L++   +      +    +   ILIYV+   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 94  VIIGLIVAALIWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           SY +L    G S W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L  
Sbjct: 154 SYAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 213

Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
               T G  GI    +  F G T         ++   FF    + +   IF+Y V L + 
Sbjct: 214 LTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTFHEFFGLEYNSINKVIFLYLVALLLA 273

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+  +I  L R  I  AW  +R+++ A  +L       KLSAF + + F G AG+FFAA
Sbjct: 274 LLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGACFAGFAGSFFAA 333

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  ++P+ F F E+ I+++IV+LGGM S   +  A  ++I + E+    + Y       
Sbjct: 334 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPEMMREFSEY------- 386

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                      +    + L+++ R   LL ++ P   L R
Sbjct: 387 --------RMLMFGALMVLMMIWRPQGLLPMQRPHMELPR 418


>gi|330878872|gb|EGH13021.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 421

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 110/338 (32%), Positives = 167/338 (49%), Gaps = 23/338 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L++  F+      +    +GI ILIYV+   GL+IVVG  GLL L  V  YA+GAYS
Sbjct: 94  LAALIVLAFIWPFFGSRGAVDIGILILIYVILGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L   YGL  W+ +P+S +++   G ++G P L+ RGDYLAI TL   EI +  L   
Sbjct: 154 YALLSHYYGLGFWICLPISGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213

Query: 141 KPITNGKAGIYVADRLYFLGTTVRS--------LIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             IT G  GI   ++    G T  S           FF    S +   IF+Y + L +  
Sbjct: 214 TDITGGPNGISNIEKPTLFGLTFDSKAAEGMQTFHEFFGLHYSSINKIIFLYLIALSLAL 273

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +  +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG+FFAA 
Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  I+P+ F F E+ I+++IV+LGGM S   +  A  ++  + EL    + Y        
Sbjct: 334 QGLITPESFNFLESAIILAIVVLGGMGSQLGVILAAIVMTIMPELMREFSDY-------- 385

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                     +    + L+++ R    L ++ P   L+
Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416


>gi|217425539|ref|ZP_03457032.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 576]
 gi|217391502|gb|EEC31531.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 576]
          Length = 427

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 160/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+V+ L+   F+      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 101 AIVWALVALGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 160

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GLS W  +P+SA+ S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 161 YTYALLNQYFGLSFWECLPLSALASATFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 220

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 221 NLTSITGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELVGLEYSGEHVVIFLYLIALV 280

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + ++F G+ GAFF
Sbjct: 281 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 340

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 341 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEVARGFAEY----- 395

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 396 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 427


>gi|309790093|ref|ZP_07684666.1| inner-membrane translocator [Oscillochloris trichoides DG6]
 gi|308227818|gb|EFO81473.1| inner-membrane translocator [Oscillochloris trichoides DG6]
          Length = 439

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 81/352 (23%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +    L F+         Y   +  Q  I+   A GL++VVG  GLL L  V  YA+G
Sbjct: 77  VGLAVVALGFVLPYFGTLNPYYIDVATQAGIFATLAMGLNVVVGFAGLLDLGYVAFYAVG 136

Query: 78  AYSYVILGSR------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           AY + I  +                  +L I +  M+ G  G+++GLP L+ RGDYLAI 
Sbjct: 137 AYLWSIFSTPQIGNMISGATPVGEGWFYLFIIIGLMVGGLFGVLLGLPVLRLRGDYLAIV 196

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV-IYEIFMY 184
           TL   E+ + + +      N   G      +          ++   F      +Y++F Y
Sbjct: 197 TLGFGEVIRVLAVNLDKPINITNGAQGIKDIERPPLFFAPALKALGFNLDNNQLYQLFFY 256

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           +++L +  ++  ++  L+ + I  AW  IR+++ A  +    ++  KL AFAV ++F G 
Sbjct: 257 FMVLLVVLITMLVVGRLKNSRIGRAWTAIREDETAAIAQGIPLVRMKLMAFAVGASFAGA 316

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            G  FA+ +  I+P  F    +I ++S+VILGG+ ++  +     ++  +          
Sbjct: 317 MGVIFASKQLFINPPTFDLLRSISILSMVILGGLGNIPGVILGAVLVTLLNLQILPRIAE 376

Query: 305 YFNSL------LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              +       +            L  + + L+++ R   +L        L 
Sbjct: 377 ILRTAKEAGLPIPQSFDPTQYQRLLFGLLMILMMIFRPEGILPEDRRRQELH 428


>gi|330889608|gb|EGH22269.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 421

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 108/338 (31%), Positives = 169/338 (50%), Gaps = 23/338 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L++  F+      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAYS
Sbjct: 94  LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L   YGL  W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L   
Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213

Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             +T G  GI   D+  F G T         ++   FF  P + +   +F+Y + L +  
Sbjct: 214 TELTGGPNGISNIDKPTFFGLTFERKTAEGMQTFHEFFGLPYNSINKVVFLYLIALLLAL 273

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +  +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG+FFAA 
Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  I+P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y        
Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                     +    + L+++ R    L ++ P   L+
Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416


>gi|304397873|ref|ZP_07379749.1| inner-membrane translocator [Pantoea sp. aB]
 gi|304354584|gb|EFM18955.1| inner-membrane translocator [Pantoea sp. aB]
          Length = 423

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 104/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  L+L          +    +    LIYVM   GL++VVG  GLL L     YAIGA
Sbjct: 90  LFMLALILVAVAWPFFVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 149

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   +GL  W  +P++ ++S   G+++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 150 YTFALLNHYFGLGFWECLPLAGIVSALFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 209

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G             +   FF          I++Y V L 
Sbjct: 210 NNTAITGGPNGIAQIPKPSLFGLEFGRKVSEGGWNTFHDFFGLKYDPSDRVIYLYLVALL 269

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 270 LVVLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 329

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y     
Sbjct: 330 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY----- 384

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        ++   + L+++ R   LL ++ P   L 
Sbjct: 385 ----------SMLVLGGLMVLMMIWRPQGLLPMKRPHLKLR 415


>gi|126456719|ref|YP_001074810.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia pseudomallei 1106a]
 gi|242311946|ref|ZP_04810963.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 1106b]
 gi|126230487|gb|ABN93900.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 1106a]
 gi|242135185|gb|EES21588.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 1106b]
          Length = 427

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 159/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V+ L+   F+      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 101 VIVWALVALGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 160

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GLS W  +P+SA+ S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 161 YTYALLNQYFGLSFWECLPLSALASATFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 220

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 221 NLTSITGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELVGLEYSGEHVVIFLYLIALV 280

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + ++F G+ GAFF
Sbjct: 281 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 340

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 341 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEVARGFAEY----- 395

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 396 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 427


>gi|167741688|ref|ZP_02414462.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia pseudomallei 14]
 gi|167818880|ref|ZP_02450560.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia pseudomallei 91]
 gi|167848743|ref|ZP_02474251.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia pseudomallei B7210]
          Length = 423

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 159/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V+ L+   F+      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 97  VIVWALVALGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GLS W  +P+SA+ S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 157 YTYALLNQYFGLSFWECLPLSALASATFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 217 NLTSITGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELVGLEYSGEHVVIFLYLIALV 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + ++F G+ GAFF
Sbjct: 277 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEVARGFAEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 423


>gi|302187249|ref|ZP_07263922.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. syringae 642]
          Length = 421

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 109/338 (32%), Positives = 169/338 (50%), Gaps = 23/338 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L++  F+      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAYS
Sbjct: 94  LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L   YGL  W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L   
Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213

Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             IT G  GI   ++  F G T         ++   FF  P + +   IF+Y + L +  
Sbjct: 214 TDITGGPNGISNIEKPTFFGLTFERKAAEGMQTFHEFFGLPYNSINKVIFLYLIALLLAL 273

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +  +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG+FFAA 
Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  I+P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y        
Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                     +    + L+++ R    L ++ P   L+
Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416


>gi|330896318|gb|EGH28413.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. japonica str. M301072PT]
 gi|330937487|gb|EGH41444.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 421

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 108/338 (31%), Positives = 168/338 (49%), Gaps = 23/338 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L++  F+      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAYS
Sbjct: 94  LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L   YGL  W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L   
Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213

Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             IT G  GI   ++    G T         ++   FF  P + +   IF+Y + L +  
Sbjct: 214 TDITGGPNGISNIEKPTLFGLTFERKAAEGMQTFHEFFGLPYNSINKVIFLYLIALLLAL 273

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +  +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG+FFAA 
Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  I+P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y        
Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                     +    + L+++ R    L ++ P   L+
Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416


>gi|330977942|gb|EGH77845.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. aptata str. DSM 50252]
          Length = 421

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 108/338 (31%), Positives = 168/338 (49%), Gaps = 23/338 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L++  F+      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAYS
Sbjct: 94  LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L   YGL  W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L   
Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213

Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             IT G  GI   ++    G T         ++   FF  P + +   IF+Y + L +  
Sbjct: 214 TDITGGPNGISNIEKPTLFGLTFERKAAEGMQTFHEFFGLPYNSINKVIFLYLIALLLAL 273

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +  +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG+FFAA 
Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  I+P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y        
Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                     +    + L+++ R    L ++ P   L+
Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416


>gi|269928714|ref|YP_003321035.1| ABC transporter-like protein [Sphaerobacter thermophilus DSM 20745]
 gi|269788071|gb|ACZ40213.1| ABC transporter related protein [Sphaerobacter thermophilus DSM
           20745]
          Length = 640

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 122/310 (39%), Gaps = 24/310 (7%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 Y  ++   +L+  +   GL ++ G  G +S        IGAY+  IL +RY +S
Sbjct: 34  TGVLGAYHLTILNFVLLRAIVVLGLVLLTGYTGQISFGQAAFVGIGAYTSAILTTRYDIS 93

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            WL +  + ++ G    ++GLP L+  G YLA+ TL    I    +++W  +T G +G  
Sbjct: 94  PWLALIAAMLLVGILAALVGLPLLQLEGHYLALGTLAFGLIVYTGMLEWHSLTGGPSGFS 153

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                  LG T  +                   Y+L+ +  L   +   +    IS   R
Sbjct: 154 GIPAFSILGITFDT--------------PRANAYLLVVITALVTWVARNVAHGRISRQAR 199

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +RD+Q     L       KL  F +++ F  ++G  +      ++P  F F  ++ +++
Sbjct: 200 AVRDSQITAECLGVGTASLKLRMFVLAAVFAALSGGLYVHLIRFVNPAPFDFLYSVELLT 259

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           + ++GG+TS+       A+L  + E                  +       L    L ++
Sbjct: 260 MAVVGGLTSIWGGLLGAAVLTVLTEALRS----------AVPGATGEVQLVLFGALLVVM 309

Query: 332 ILMRSHSLLR 341
           ++     L  
Sbjct: 310 LIFWPSGLAG 319


>gi|320325673|gb|EFW81735.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. glycinea str. B076]
          Length = 421

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 108/338 (31%), Positives = 169/338 (50%), Gaps = 23/338 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L++  F+      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAYS
Sbjct: 94  LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L   YGL  W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L   
Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213

Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             +T G  GI   D+  F G T         ++   FF  P + +   +F+Y + L +  
Sbjct: 214 TELTGGPNGISNIDKPTFFGLTFERKAAEGMQTFHEFFGLPYNSINKVVFLYLIALLLAL 273

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +  +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG+FFAA 
Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLDPTVIKLSAFTLGAAFAGFAGSFFAAR 333

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  I+P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y        
Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                     +    + L+++ R    L ++ P   L+
Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416


>gi|317494577|ref|ZP_07952990.1| branched-chain amino acid transport system/permease
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917507|gb|EFV38853.1| branched-chain amino acid transport system/permease
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 423

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 108/340 (31%), Positives = 164/340 (48%), Gaps = 24/340 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+  +L+   +      +    +    LIYVM   GL++VVG  GLL L     YAIGA
Sbjct: 91  LVLMLILIAAVVWPFVVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   YG+  W  +P++ +++ A G+++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTYALLNHYYGIGFWESLPIAGIVAAAFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +  F G             S   FF          IF+Y V L 
Sbjct: 211 NNTEITGGPNGISQIPKPTFFGLEFNRSVRDGGWGSFHEFFGLKYDPSDRIIFLYLVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  ++  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 271 LVVITLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F E+  V++IV+LGGM S   +  A  IL+   EL   +N Y     
Sbjct: 331 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAVILVVSRELMRDLNEY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
                        L+   + L+++ R   LL ++ P    
Sbjct: 386 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKF 415


>gi|289648001|ref|ZP_06479344.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|298488779|ref|ZP_07006807.1| branched-chain amino acid transport system permease protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298156697|gb|EFH97789.1| branched-chain amino acid transport system permease protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
          Length = 421

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 108/338 (31%), Positives = 169/338 (50%), Gaps = 23/338 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L++  F+      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAYS
Sbjct: 94  LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L   YGL  W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L   
Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213

Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             +T G  GI   D+  F G T         ++   FF  P + +   +F+Y + L +  
Sbjct: 214 TELTGGPNGISNIDKPTFFGLTFERKAAEGMQTFHEFFGLPYNSINKVVFLYLIALLLAL 273

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +  +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG+FFAA 
Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  I+P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y        
Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                     +    + L+++ R    L ++ P   L+
Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416


>gi|253686514|ref|YP_003015704.1| inner-membrane translocator [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753092|gb|ACT11168.1| inner-membrane translocator [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 424

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 108/329 (32%), Positives = 158/329 (48%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    LIYVM   GL++VVG  GLL L     YAIGAY+Y +L   YGL
Sbjct: 103 WPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ M +   G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWESLPLAGMAAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  L+  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRSARDGGWDTFHNFFGLQYDPSDRIIFLYLVALLLVVLTLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +RD++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALRDDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL   +N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            L+   + L+++ R   LL ++ P   L+
Sbjct: 388 LLLGALMVLMMIWRPQGLLPMKRPEMKLK 416


>gi|227113841|ref|ZP_03827497.1| leucine/isoleucine/valine transporter permease subunit
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 424

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 108/329 (32%), Positives = 159/329 (48%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    LIYVM   GL++VVG  GLL L     YAIGAY+Y +L   YGL
Sbjct: 103 WPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ M++   G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWESLPLAGMVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  L+  +I  L
Sbjct: 223 SQIPKPTFFGLEFGRSARDGGWDTFHNFFGLQYDPSDRIIFLYLVALLLVVLTLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +RD++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALRDDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL   +N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            L+   + L+++ R   LL ++ P   L+
Sbjct: 388 LLLGALMVLMMIWRPQGLLPMKRPEMKLK 416


>gi|289676844|ref|ZP_06497734.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. syringae FF5]
          Length = 421

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 108/338 (31%), Positives = 168/338 (49%), Gaps = 23/338 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L++  F+      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAYS
Sbjct: 94  LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L   YGL  W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L   
Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213

Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             IT G  GI   ++    G T         ++   FF  P + +   IF+Y + L +  
Sbjct: 214 TDITGGPNGISNIEKPTLFGLTFERKAAEGMQTFHEFFGLPYNSINKVIFLYLIALLLAL 273

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +  +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG+FFAA 
Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  I+P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y        
Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                     +    + L+++ R    L ++ P   L+
Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416


>gi|238755232|ref|ZP_04616577.1| High-affinity branched-chain amino acid transport system permease
           protein [Yersinia ruckeri ATCC 29473]
 gi|238706573|gb|EEP98945.1| High-affinity branched-chain amino acid transport system permease
           protein [Yersinia ruckeri ATCC 29473]
          Length = 423

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 104/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    LIY+M   GL++VVG  GLL L     YAIGAY+Y +L   YGL
Sbjct: 98  WPFLVSRGTVDIATLTLIYIMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYYGL 157

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++   G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 158 GFWESLPLAGLVAALFGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 217

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  L+  +I  L
Sbjct: 218 GQIPKPTLFGLEFSRNAKDGGWDTFHNFFGLNYDPSDRIIFLYLVALLLVILTLFVINRL 277

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 278 LRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 337

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y                 
Sbjct: 338 TFVESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNAY---------------SM 382

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            L+   + L+++ R   LL ++ P   L+
Sbjct: 383 LLLGALMVLMMIWRPQGLLPMKRPQLKLK 411


>gi|308188471|ref|YP_003932602.1| High-affinity branched-chain amino acid transport system permease
           protein livM [Pantoea vagans C9-1]
 gi|308058981|gb|ADO11153.1| High-affinity branched-chain amino acid transport system permease
           protein livM [Pantoea vagans C9-1]
          Length = 423

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 106/341 (31%), Positives = 163/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+  L++          +    +    LIYVM   GL++VVG  GLL L     YAIGA
Sbjct: 90  LVMAVLIIAAVAWPFLVSRGTVDIATMTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 149

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YGL  W  +P+S M++   G+++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 150 YTFALLNHYYGLGFWQCLPLSGMVAALFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 209

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G             +   FF          IF+Y V L 
Sbjct: 210 NNTALTGGPNGISQIPKPTLFGLEFGRTPREGGWDTFHNFFGLKYDPSDRIIFLYLVALL 269

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG+ F
Sbjct: 270 LVVLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGSLF 329

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y     
Sbjct: 330 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY----- 384

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        ++   + L+++ R   LL ++ P   L 
Sbjct: 385 ----------SMLVLGGLMVLMMIWRPQGLLPMKRPHLKLR 415


>gi|227329280|ref|ZP_03833304.1| leucine/isoleucine/valine transporter permease subunit
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 424

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 108/329 (32%), Positives = 159/329 (48%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    LIYVM   GL++VVG  GLL L     YAIGAY+Y +L   YGL
Sbjct: 103 WPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ M++   G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWESLPLAGMVAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  L+  +I  L
Sbjct: 223 SQIPKPTFFGLEFGRSARDGGWDTFHNFFGLQYDPSDRVIFLYLVALLLVVLTLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +RD++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALRDDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL   +N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            L+   + L+++ R   LL ++ P   L+
Sbjct: 388 LLLGALMVLMMIWRPQGLLPMKRPEMKLK 416


>gi|71735995|ref|YP_273671.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|71556548|gb|AAZ35759.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|320327044|gb|EFW83058.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330877003|gb|EGH11152.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 421

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 108/338 (31%), Positives = 169/338 (50%), Gaps = 23/338 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L++  F+      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAYS
Sbjct: 94  LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L   YGL  W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L   
Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213

Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             +T G  GI   D+  F G T         ++   FF  P + +   +F+Y + L +  
Sbjct: 214 TELTGGPNGISNIDKPTFFGLTFERKAAEGMQTFHEFFGLPYNSINKVVFLYLIALLLAL 273

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +  +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG+FFAA 
Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  I+P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y        
Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                     +    + L+++ R    L ++ P   L+
Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416


>gi|52212027|emb|CAH38034.1| high-affinity branched-chain amino acid transport system permease
           protein [Burkholderia pseudomallei K96243]
          Length = 410

 Score =  140 bits (351), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 160/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+V+ L+   F+      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 84  AIVWALVALGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 143

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GLS W  +P+SA+ S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 144 YTYALLNQYFGLSFWECLPLSALASATFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 203

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 204 NLTSITGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELVGLEYSGEHVVIFLYLIALV 263

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + ++F G+ GAFF
Sbjct: 264 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 323

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 324 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEVARGFAEY----- 378

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 379 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPK 410


>gi|257486679|ref|ZP_05640720.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|330984886|gb|EGH82989.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331010151|gb|EGH90207.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 421

 Score =  140 bits (351), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 108/338 (31%), Positives = 169/338 (50%), Gaps = 23/338 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L++  F+      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAYS
Sbjct: 94  LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L   YGL  W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L   
Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213

Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             +T G  GI   D+  F G T         ++   FF  P + +   +F+Y + L +  
Sbjct: 214 TELTGGPNGISNIDKPTFFGLTFERKAAEGMQTFHEFFGLPYNSINKVVFLYLIALLLAL 273

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +  +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG+FFAA 
Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  I+P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y        
Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                     +    + L+++ R    L ++ P   L+
Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416


>gi|187925117|ref|YP_001896759.1| branched-chain amino acid ABC transporter inner membrane protein
           [Burkholderia phytofirmans PsJN]
 gi|187716311|gb|ACD17535.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
          Length = 389

 Score =  140 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 83/345 (24%), Positives = 149/345 (43%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   +     ++    +       Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  LTVGIITAIFVIAAPMIIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                 +   +++P +  ++   G+I+G P+L+ 
Sbjct: 83  YAVGAYTSALLSSPHLSSQFEWIAHLAPNGLHVPFLIIVPCAMAVAAFFGVILGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  L       N   G      +  +     SL +         
Sbjct: 143 RGDYLAIVTLGFGEIVRIFLNNLDRPVNITNGPKGITGIDPVHAGDFSLAQTHSLFGLQF 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYSYYYLFVLAALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA F + +  +SP+ F   E+I+V++ V+LGGM  +  +     +L  + E 
Sbjct: 263 GASFGGLSGAMFGSFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLPEF 322

Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                    N +   +     +    +  +A+ L++L RS  L  
Sbjct: 323 LRSTMGPLQNMVFGHEIVDTEVIRQLVYALAMVLIMLYRSEGLWP 367


>gi|242277715|ref|YP_002989844.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638]
 gi|242120609|gb|ACS78305.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638]
          Length = 405

 Score =  140 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 96/336 (28%), Positives = 153/336 (45%), Gaps = 18/336 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K    L      + +L F         +Y   + I  +IY+    GL+IVVG  G+L L 
Sbjct: 82  KATSTLPFAVWAFAILAFAVAYPHLFGRYAQDVAINCMIYICLGLGLNIVVGLAGMLDLG 141

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
            +  Y +GAY+Y +L   + L+ WL +P+SA ++G    I+G  S++ RGDYLAI TL  
Sbjct: 142 YIAFYGLGAYTYALLSINFKLAFWLCLPISAGVAGLGACIIGYCSMRMRGDYLAIVTLGF 201

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +EI + +L  W  +TNG  GI              +           +     +YYV+L 
Sbjct: 202 AEIVRMVLNNWMSLTNGPNGITGIKAPGAYWPDFANGFTLEHLWLKKLSL---IYYVILA 258

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +   +  L  + I  AW  IR+++ A   +     + KL A+   + F GMAGAF+
Sbjct: 259 LVVFTIIAVYRLNHSRIGRAWEAIREDETAAEVMGIPTFYMKLLAYCSGACFGGMAGAFY 318

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA    +SP+ F F E+ +V+S+V+LGGM S+  +      LI + E+      Y     
Sbjct: 319 AARMRFVSPESFTFLESAMVLSMVVLGGMGSIPGVILGALALIALPEIFRDFELY----- 373

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                        +    + L++L R   LL  +  
Sbjct: 374 ----------RMLVFGGVMTLMMLFRPQGLLPPKRR 399


>gi|78067297|ref|YP_370066.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia sp. 383]
 gi|77968042|gb|ABB09422.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia sp. 383]
          Length = 389

 Score =  140 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 83/345 (24%), Positives = 154/345 (44%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I+  +     ++    +  +    Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  IIIGVLTAVFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                    ++++P++  ++   G+++G P+L+ 
Sbjct: 83  YAVGAYTAALLSSPHLSSQFEWIAALAPNGLHFPFFVIVPIAMALAATFGILLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +     SL +        +
Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHIGDFSLAQTHSLFGIQL 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYMYYYLFVLCSLLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA F + +  +SP+ F F E+I+V++ V+LGGM  +  +     +L    E 
Sbjct: 263 GASFGGLSGAMFGSFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPEF 322

Query: 298 CCGMNFYYFNSLLKFD-CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    +++   D     +    L  +A+ +++L RS  L  
Sbjct: 323 LRSTMSPLQHAIFGHDVVDTEVIRQALYGLAMVVIMLYRSEGLWP 367


>gi|289626713|ref|ZP_06459667.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|330867289|gb|EGH01998.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. aesculi str. 0893_23]
          Length = 421

 Score =  140 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 108/336 (32%), Positives = 168/336 (50%), Gaps = 23/336 (6%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L++  F+      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAYSY 
Sbjct: 96  ALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYSYA 155

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +L   YGL  W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L     
Sbjct: 156 LLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNLTE 215

Query: 143 ITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           +T G  GI   D+  F G T         ++   FF  P + +   +F+Y + L +   +
Sbjct: 216 LTGGPNGISNIDKPTFFGLTFERKAAEGMQTFHEFFGLPYNSINKVVFLYLIALLLALAA 275

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG+FFAA + 
Sbjct: 276 LFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAARQG 335

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            I+P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y          
Sbjct: 336 LITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY---------- 385

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                   +    + L+++ R    L ++ P   L+
Sbjct: 386 -----RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416


>gi|237798831|ref|ZP_04587292.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331021684|gb|EGI01741.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 421

 Score =  140 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 108/338 (31%), Positives = 168/338 (49%), Gaps = 23/338 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L++  F+      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAYS
Sbjct: 94  LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L   YGL  W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L   
Sbjct: 154 YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 213

Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             IT G  GI   ++    G T         ++   FF  P + +   IF+Y + L +  
Sbjct: 214 TDITGGPNGISNIEKPTLFGLTFERKAAEGMQTFHEFFGLPYNSINKVIFLYLIALLLAL 273

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +  +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG+FFAA 
Sbjct: 274 AALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAAR 333

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  I+P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y        
Sbjct: 334 QGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-------- 385

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                     +    + L+++ R    L ++ P   L+
Sbjct: 386 -------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 416


>gi|158424567|ref|YP_001525859.1| branched-chain amino acid ABC transporter permease protein
           [Azorhizobium caulinodans ORS 571]
 gi|158331456|dbj|BAF88941.1| branched-chain amino acid ABC transporter permease protein
           [Azorhizobium caulinodans ORS 571]
          Length = 480

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 120/357 (33%), Positives = 179/357 (50%), Gaps = 20/357 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              +A++YPLL  L  G     +Y   +GI I  YVM  WGL+IVVG  GLL L  V  Y
Sbjct: 110 FFAIAILYPLLAVLLSGGLTPSRYWIDLGIYIGSYVMLGWGLNIVVGLAGLLDLGYVAFY 169

Query: 75  AIGAYSYVILGS----------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           A+GAY++ +L +                    S W+ +PV  +++   G+I+G P L+ R
Sbjct: 170 AVGAYAFALLSTSVPINDWMAGHLGENFWALWSFWVCLPVCGLLAALWGVILGFPVLRLR 229

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPS 174
           GDYLAI TL   EI + +LI W   TNG AGI     + F G             F    
Sbjct: 230 GDYLAIVTLAFGEIIRLVLINWTDFTNGAAGIASIPPISFFGIPFSSGDDGFAALFGLTF 289

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
             +   IF+Y+V++ +  L+A   L LRR  +  AW  +R+++ A  SL       KL+A
Sbjct: 290 DPMHRIIFLYFVIVALSALTALATLRLRRMPVGRAWEALREDEIACRSLGINTTLTKLTA 349

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           FA  + F G AGAFFA     +SP+ F F E+ ++++IV+LGGM S   +A A   +IG 
Sbjct: 350 FATGAMFGGFAGAFFAVRVRFVSPESFTFMESAMILAIVVLGGMGSQMGVAAAAVFMIGG 409

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +E+   + F   + LL  D    +    +   A+  V++ R   ++  R  + FL+ 
Sbjct: 410 MEMLRNLTFLKSDWLLGPDFDPTLYRMLIFGFAMVAVMVWRPRGIVSGRLATIFLKE 466


>gi|297566713|ref|YP_003685685.1| ABC transporter-like protein [Meiothermus silvanus DSM 9946]
 gi|296851162|gb|ADH64177.1| ABC transporter related protein [Meiothermus silvanus DSM 9946]
          Length = 589

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 61/324 (18%), Positives = 120/324 (37%), Gaps = 21/324 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +    L+ +      +  +  S+G  +    + A GL ++ G  G+ S        + 
Sbjct: 6   LTLGAVALVLIVPLLLPASSFYLSLGNYVAFGALVALGLYLLTGMAGMTSFGQAAFMGLA 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  +L S  G S WL +P+  +++ A  +++G  + + +G YL ++T+        +L
Sbjct: 66  AYTTALLTSERGFSPWLTLPIGVLVAMAGAVVLGGITARLKGHYLPLSTIAWCMALYIVL 125

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
             W  +T G  G+     +   G  +     F              +Y+        A  
Sbjct: 126 GSWTELTGGHTGLRNIPPVSVFGLELSDSRSF--------------FYLSWFFALAGAWT 171

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L  + I  A R  + +  A  S        KL  F +S+ + G+AG  +A  +  I+
Sbjct: 172 AWNLTNSRIGRAMRASKGDAIAAASFGVNPGALKLRVFVLSAVYAGVAGWLYAHYQQFIN 231

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F    +I  +   + GG+ S+  +     ++ G+ E    +    F           
Sbjct: 232 PSPFSLEASIKYLIAAVAGGVGSIPGVFLGAGLVTGLEEALKDILPVIFGR-------TG 284

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                   + L L+++     L  
Sbjct: 285 NYEIIAYGLILVLILMFAPKGLWP 308


>gi|167841011|ref|ZP_02467695.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia thailandensis MSMB43]
          Length = 423

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 161/342 (47%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+V+ L+ F F+      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 97  AIVWALVAFGFVWPFFGSRGAVDIATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GL+ W  +P++A+ S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 157 YTYALLNQYFGLTFWECLPLAALASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 217 NLTSITGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHVVIFLYLIALV 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + ++F G+ GAFF
Sbjct: 277 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + EL  G   Y     
Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPELARGFAEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423


>gi|312795315|ref|YP_004028237.1| branched-chain amino acid transport system permease protein livM
           [Burkholderia rhizoxinica HKI 454]
 gi|312167090|emb|CBW74093.1| Branched-chain amino acid transport system permease protein livM
           [Burkholderia rhizoxinica HKI 454]
          Length = 392

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 163/368 (44%), Gaps = 18/368 (4%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+  S++    D ++ LL     +   L +GA     Y   +    ++YVM A GL++VV
Sbjct: 11  MTRVSIKKTAKDHVVMLLVTALVVCAPLLIGAAGGP-YWVRVLDFAMLYVMLALGLNVVV 69

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISG 104
           G  GLL L  +  YA+GAY+  +L S +                 +SI L++PV+  ++ 
Sbjct: 70  GFCGLLDLGYIAFYAVGAYTAALLSSPHLTTQFEWIAHLAPGGLHVSILLIVPVAMALAA 129

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
            CG+++G P+L+ RGDYLAI TL   EI +  +       N   G      +  +     
Sbjct: 130 VCGVLLGAPTLRLRGDYLAIVTLGFGEIVRIFMNNMDRPVNVTNGPKGITGIDPVQIGGF 189

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           +L +               YY+ +        +   L+ + I  AW  IR+++ A  ++ 
Sbjct: 190 NLAQTHELFGLKFPTVYLYYYLFVLCSLFVVFVCTRLQHSRIGRAWAAIREDEVAAKAMG 249

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                 KL AFA+ ++F G++GA F   +  +SP+ F F E+++V++ V+LGGM  +  +
Sbjct: 250 INTRNVKLLAFAMGASFGGLSGAMFGVFQGFVSPESFTFWESVVVLACVVLGGMGHIPGV 309

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                +L    E          N++         +    L  +A+ +++L R   L    
Sbjct: 310 ILGAVLLAVFPEFLRSTMGPLQNAIFGHPILDTEVIRQLLYGLAMVVIMLYRPEGLWPAA 369

Query: 344 TPSNFLER 351
              + L +
Sbjct: 370 KHEDKLAK 377


>gi|242241264|ref|YP_002989445.1| leucine/isoleucine/valine transporter permease subunit [Dickeya
           dadantii Ech703]
 gi|242133321|gb|ACS87623.1| inner-membrane translocator [Dickeya dadantii Ech703]
          Length = 425

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 105/330 (31%), Positives = 156/330 (47%), Gaps = 24/330 (7%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +      +    +    LIYVM   GL++VVG  GLL L     YAIGAY+Y +L   YG
Sbjct: 103 MWPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLSHYYG 162

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L  W  +P++ + +   G ++G P L+ RGDYLAI TL   EI + +L+     T G  G
Sbjct: 163 LGFWQCLPLAGLTAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTGFTGGPNG 222

Query: 150 IYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           I    +    G             +   FF          IF+Y V L +  L+  II  
Sbjct: 223 ISQIPKPTLFGLEFNRASREGGWDTFHHFFGLTYDPSDRIIFLYMVALLLVLLTLFIINR 282

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ 
Sbjct: 283 LLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLFAARQGFVSPES 342

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y                
Sbjct: 343 FTFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNEY---------------S 387

Query: 321 TTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
             L+   + L+++ R   LL ++ P   L+
Sbjct: 388 MLLLGALMVLMMIWRPQGLLPMKRPQMKLQ 417


>gi|84616855|emb|CAJ13749.1| ABC-type branched-chain amino acid transport system, permease
           component [Desulfococcus multivorans]
          Length = 408

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 103/338 (30%), Positives = 168/338 (49%), Gaps = 18/338 (5%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           + ++    + +   +  LL    L    + +Y   +   +LIY+    GL+IVVG  G+L
Sbjct: 79  KASRLIGAVPVWVWIGALLAAACLYPLFTGRYAQDVATNVLIYICLGLGLNIVVGLAGML 138

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L  +  Y +GAY+Y +L   YGLS W+ +P++A ++   G I+G P+L+ RGDYLAI T
Sbjct: 139 DLGYIAFYGVGAYTYALLNLHYGLSFWICLPIAAALACIAGCIIGYPTLRMRGDYLAIVT 198

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + IL  W  +TNG  G+            V S    F F   ++    ++YY+
Sbjct: 199 LGFGEIVRIILNNWMTLTNGPNGLLGIKPPS---IYVPSFEAGFSFELLYIKKLQYLYYI 255

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            LG+  L+ + +  L  + I  AW +IR+++ A   +       KL A+A+ + F G+AG
Sbjct: 256 ALGLAILTITAVRRLNHSRIGRAWESIREDETAAELMGVNTFILKLLAYAMGALFAGLAG 315

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           AFF A    +SP+ F F E+ +V+S+V+LGGM S+  I    A LI + E+      Y  
Sbjct: 316 AFFCARMRFVSPESFTFIESAMVLSMVVLGGMASIPGIMLGAAALIVLPEVFREFETY-- 373

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                              +A+ +++L R   L+  + 
Sbjct: 374 -------------RMLAFGLAMVVMMLFRPAGLIPAKR 398


>gi|117621101|ref|YP_854640.1| leucine/isoleucine/valine transporter permease subunit [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117562508|gb|ABK39456.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 423

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 102/340 (30%), Positives = 161/340 (47%), Gaps = 24/340 (7%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
              +LLF       + +    +    LIY+M   GL++VVG  GLL L  V  YA+GAYS
Sbjct: 99  AVLVLLFAVSWPFMASRGAIDLATLALIYIMLGLGLNVVVGLAGLLDLGYVGFYAVGAYS 158

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L + +GLS W  +P++ + +   G ++G P L+ RGDYLAI TL   EI + +L   
Sbjct: 159 YALLNTYFGLSFWECLPIAGLTAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLNNM 218

Query: 141 KPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLGMC 191
             +T G  GI    +    G             +   FF    +     IF+Y + L + 
Sbjct: 219 TSLTGGPNGISGIPKPTLGGLEFNRTVKDGGFETFHEFFGIAYNANHKVIFLYLMALVLV 278

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
             +  +I  L R  +  AW  +R+++ A  SL       KL+AF + + F G AG+FFA+
Sbjct: 279 IATLFVINRLLRMPLGRAWEALREDEIACKSLGLNPTIIKLTAFTIGACFAGFAGSFFAS 338

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  ISP+ F F E+ IV++IV+LGGM S   +  A  ++  + EL    N Y       
Sbjct: 339 RQGFISPESFVFIESAIVLAIVVLGGMGSQIGVVLAAIVMTVLPELAREFNEY------- 391

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                      +  + +  +++ R   LL +  P   L++
Sbjct: 392 --------RMLMFGLLMVFMMIWRPQGLLPMTRPHLELKK 423


>gi|77457473|ref|YP_346978.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           fluorescens Pf0-1]
 gi|77381476|gb|ABA72989.1| L-isoleucine ABC transporter membrane protein / L-leucine ABC
           transporter membrane protein / L-valine ABC transporter
           membrane protein [Pseudomonas fluorescens Pf0-1]
          Length = 418

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 107/339 (31%), Positives = 169/339 (49%), Gaps = 23/339 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L++   +      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAYS
Sbjct: 95  IIALIIGALVWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 154

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L   YGLS W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L   
Sbjct: 155 YALLSHYYGLSFWICLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRNL 214

Query: 141 KPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             IT G  GI   ++  F G T         ++   +F    + +   IF+Y V L +  
Sbjct: 215 TDITGGPNGISNIEKPTFFGLTFERKAAEGLQTFHEYFGLEYNSINKVIFLYLVALLLAL 274

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +  II  L R  I  AW  +R+++ A  +L       KLSAF + ++F G AG+FFAA 
Sbjct: 275 AALFIINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGASFAGFAGSFFAAR 334

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P+ F F E+ I+++IV+LGGM S   +  A  ++I + E+    + Y        
Sbjct: 335 QGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAVVMILLPEMMREFSEY-------- 386

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                     +    + L+++ R   LL ++ P   L +
Sbjct: 387 -------RMLMFGALMVLMMIWRPQGLLPMQRPHMELRK 418


>gi|329295842|ref|ZP_08253178.1| leucine/isoleucine/valine transporter permease subunit [Plautia
           stali symbiont]
          Length = 423

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 100/342 (29%), Positives = 161/342 (47%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++  +++          +    +    LIYVM   GL++VVG  GLL L     YAIGA
Sbjct: 90  LLMLLVIVAAIAWPFFVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 149

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +    YG   W  +P++ +++GA G+++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 150 YTFALFNHYYGFGFWESLPLAGIVAGAFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 209

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G             +               IF+Y V L 
Sbjct: 210 NSTSITGGPNGIAQIPKPSLFGIKFGRRVSEGGWTTFHELTGLAYDPNHRVIFLYLVALL 269

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+ F G AG  F
Sbjct: 270 LVVLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAVFAGFAGTLF 329

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y     
Sbjct: 330 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQLAVILAAILLVVSRELMRDLNEY----- 384

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        ++   + L+++ R   LL ++ P   L++
Sbjct: 385 ----------SMLVLGGLMVLMMIWRPQGLLPMKRPHLKLKQ 416


>gi|332283962|ref|YP_004415873.1| putative ABC transport protein, ATP-binding component [Pusillimonas
           sp. T7-7]
 gi|330427915|gb|AEC19249.1| putative ABC transport protein, ATP-binding component [Pusillimonas
           sp. T7-7]
          Length = 362

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 94/341 (27%), Positives = 157/341 (46%), Gaps = 4/341 (1%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
           K+   +A+   +L  L      + +         L+YVM A GL+IVVG  GLL L  + 
Sbjct: 14  KVWLGIALCGVVLAILPFVLGMAGQSWVRTMNFALLYVMLALGLNIVVGFAGLLDLGYIA 73

Query: 73  AYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
            YA+GAY + +L S +    L  W+++P   +++   G ++G P+LK RGDYLAI TL  
Sbjct: 74  FYAVGAYVWALLASPHFGLHLPFWIVLPAGVVLAAFFGAMLGAPTLKLRGDYLAIVTLGF 133

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            EI +  +       N   G    +R+        +  R        +      YY+LL 
Sbjct: 134 GEIVRIFMNNLDAPVNITNGPQGINRIDTFAIGEFAFGRSQSLLGFRITGPEKYYYLLLF 193

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  +   I   L+ + I  AW  +R+++ A  ++       KL AF++ ++F G+AGA F
Sbjct: 194 LTIVIVIICARLQNSRIGRAWEAVREDEVAAKAMGINTRNIKLLAFSMGASFGGVAGAMF 253

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A+ +  +SP+ F  +E+I+V+ +V+LGGM ++  +     +L    EL   +      +L
Sbjct: 254 ASMQGFVSPESFSLTESIMVLCMVVLGGMGNIPGVILGAILLSVFPELLRAVVVPLQQTL 313

Query: 310 LK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
                   +     L   AL LV++ R   L         L
Sbjct: 314 FGDVILDPDGIRMLLFGFALVLVMIFRPAGLWPSAVRRREL 354


>gi|182417306|ref|ZP_02948646.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivM [Clostridium butyricum 5521]
 gi|237668397|ref|ZP_04528381.1| high-affinity branched-chain amino acid transport system permease
           protein [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182378814|gb|EDT76333.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivM [Clostridium butyricum 5521]
 gi|237656745|gb|EEP54301.1| high-affinity branched-chain amino acid transport system permease
           protein [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 348

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 68/338 (20%), Positives = 136/338 (40%), Gaps = 37/338 (10%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              I   + ++   +  L +       Y   +  QI I+++ A GL++++G  G L++  
Sbjct: 20  RYAITTGVLLIIYWMALLLIQKGIMDNYTLRIVKQIGIFMIAALGLNLILGFTGQLTMGH 79

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               +IGAY   ++   + +   + + +  ++S     ++G P L+ +GDYLAI TL   
Sbjct: 80  AAFMSIGAYGSAVMTQNFNMPFAVSLVMGTVLSCIMAALIGYPILRLKGDYLAICTLGFG 139

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           EI + I+     +  G  G+                                   ++   
Sbjct: 140 EIVKVIIQNIDYV-GGARGMTSIP-------------------------TKSSLLIIFLC 173

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                +++  L  ++   A  ++R+++ A  ++       K+ AF + S   G+AG  +A
Sbjct: 174 VAGCYALLKNLLHSSKGRAIMSVREDEIAAEAMGINTTKYKMMAFIIGSGMAGLAGGLYA 233

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                I P  F FS++  +I+ V+LGGM S+S     T+ILI + E   G++        
Sbjct: 234 HFNTFIDPVTFNFSKSFELITYVVLGGMGSISGTVLGTSILIFLPESLRGLSD------- 286

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                       +    L ++++ R   +L  R  +  
Sbjct: 287 ----VLKENRMLIYAFLLVVMMIFRPDGILGSREITVK 320


>gi|126669165|ref|ZP_01740090.1| leucine/isoleucine/valine transporter subunit [Marinobacter sp.
           ELB17]
 gi|126626376|gb|EAZ97048.1| leucine/isoleucine/valine transporter subunit [Marinobacter sp.
           ELB17]
          Length = 423

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 105/340 (30%), Positives = 165/340 (48%), Gaps = 24/340 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+  L++        S +    +   +LIYV+ A GL++VVG  GLL L  V  YA+GAY
Sbjct: 96  VLTGLVVVALFWPFFSSRGAVDLATLVLIYVILALGLNVVVGLAGLLDLGYVAFYAVGAY 155

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           ++ +L   YG+S W+ +P+ A+++G  G+++G P L+ RGDYLAI TL   EI + +L  
Sbjct: 156 TFALLSQYYGVSFWMALPLGALLAGLFGLLLGFPVLRLRGDYLAIVTLGFGEIIRILLNN 215

Query: 140 WKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           W  +T G  GI         G             S    F    S     IF+Y + L +
Sbjct: 216 WTNVTGGPNGIGGIPDPTLFGMEFGRRVKGEGNTSFHETFGIAYSGEHKVIFLYLIALVL 275

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++A II  L +  +  AW  +R+++ A  SL  +    KLSAF + + F G AG  FA
Sbjct: 276 AIITALIIRRLMKMPVGRAWEALREDEIAARSLGLSRTAVKLSAFTIGAFFAGFAGTIFA 335

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           + +  ISP+ F F E+ IV++IV+LGGM S   +  A   +  + EL    + Y      
Sbjct: 336 SKQGFISPESFVFLESAIVLAIVVLGGMGSQIGVILAAIAVTILPELAREFSEY------ 389

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                       +    + L+++ R   L+ +R     L+
Sbjct: 390 ---------RMLIFGATMVLMMIWRPQGLVPMRRLHITLK 420


>gi|160879408|ref|YP_001558376.1| inner-membrane translocator [Clostridium phytofermentans ISDg]
 gi|160428074|gb|ABX41637.1| inner-membrane translocator [Clostridium phytofermentans ISDg]
          Length = 357

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 83/325 (25%), Positives = 146/325 (44%), Gaps = 28/325 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +   +L L      S +YI ++ ++I IY+M A GL+I+VG  GL+SL      AIGA
Sbjct: 33  LAILCGVLLLVFPKIISDRYILTISVKIGIYIMLALGLNILVGYTGLVSLGHAGFVAIGA 92

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L ++ G   +L I V  +++   G+++GLP+L+  G YL+I TL   EI + I +
Sbjct: 93  YTASLLATKLGFGFFLSILVGMVVAALAGLLLGLPTLRLSGTYLSIVTLGFGEIVKTIAM 152

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  +TNG  G+         G  +        +    ++  +                 
Sbjct: 153 NWDSVTNGTLGVKNIPSPKLFGIKLTIANHGLYYLMLAMLLIV-------------TVFC 199

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + ++    A+  I+ ++ A   +   + + K+ AF +S+    +AGA +A     I P
Sbjct: 200 YLVYKSRTGRAFLAIKTDEMAGTMMGINVTYYKVLAFVLSAVISAVAGALYATLIGYIDP 259

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F F  + +++SIVILGGM ++  +     ILI   E+   +  Y              
Sbjct: 260 NTFTFDVSTLILSIVILGGMGTIRGMFVGALILISFPEVSRSLMDY-------------- 305

Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343
               +  + L L++  R   LL  R
Sbjct: 306 -RFVVYGLILILMMRFRPQGLLGWR 329


>gi|220926355|ref|YP_002501657.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219950962|gb|ACL61354.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 611

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 69/337 (20%), Positives = 136/337 (40%), Gaps = 30/337 (8%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
                +   +  L+  +    L           Y+ ++ +Q   Y +   GL++V+G  G
Sbjct: 15  PTPAARRLPLGSLVYALVAAGLVALAVTMPVNGYLLNILMQAATYAIAVIGLTVVLGLCG 74

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            ++L     + +GAY+  +     G+S W+ +      +   G  +G  +L+  G YLA+
Sbjct: 75  QINLAQAAFFGLGAYAVGLGTVDLGVSFWICLAAGLAAALVAGAFLGASTLRLGGHYLAM 134

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            T+   +I   +L+ W P+T+G  G+    R                             
Sbjct: 135 VTISFQQILTLVLVNWIPVTHGPDGVPRIQRPALFTD------------------GQAYL 176

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            + L +  + A I+  + RT +  A R +RDN+ A       +   K+ AFA+ +   G+
Sbjct: 177 GLCLAVLAVVAWIVWHMPRTRLGRAMRAVRDNELAAGVTGIDVYRTKVMAFAIGALLAGL 236

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            G  FA     +SPD F F+E+I+ +++ +LGG+ S +     T +LI + E    +   
Sbjct: 237 GGGLFAGGFTYVSPDQFSFAESIVFLTMALLGGVGSPAGAVIGTGLLILIPEWLRFLKE- 295

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                          +  +  +A+ L+++     +  
Sbjct: 296 -----------IPGLYLAIYGLAVILIVVFMPEGIWG 321


>gi|160899767|ref|YP_001565349.1| leucine/isoleucine/valine transporter permease subunit [Delftia
           acidovorans SPH-1]
 gi|160365351|gb|ABX36964.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 412

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 102/340 (30%), Positives = 161/340 (47%), Gaps = 24/340 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++   LL        + +    +    +IYVM   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 87  LILAALLIAVSWPFFAGRNAVDIATLAMIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGAY 146

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L    G S W  +P++   +   G ++G P L+ RGDYLAI TL   EI + +L+ 
Sbjct: 147 TYALLFHWAGWSFWEALPLAGAAAAMFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLMLVN 206

Query: 140 WKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190
              IT G  GI    +   LG  +          +  +F     S +   IF+Y + L +
Sbjct: 207 LTSITGGPDGISSIPKPTVLGLEMTRTPSTEGGTTFHQFLGLEFSSLHMVIFLYLMALLL 266

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++  I   L R  I  AW  +R+++ A  SL    +  KLSAF + + F G+ GAFFA
Sbjct: 267 AVITLCISNRLVRMPIGRAWEALREDEIACRSLGLNPMKIKLSAFTLGAMFAGLGGAFFA 326

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           A +  ++P+ F F E+ +++SIV+LGGM S   +  A  +L  + EL    + Y      
Sbjct: 327 ARQGIVNPESFTFIESALILSIVVLGGMGSQLGVIIAAILLTVLPELAREFSEY------ 380

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                       +  + + L+++ R   LL +R     + 
Sbjct: 381 ---------RMLIFGLVMVLMMIWRPQGLLPMRRHHVEVR 411


>gi|226940832|ref|YP_002795906.1| LivM [Laribacter hongkongensis HLHK9]
 gi|226715759|gb|ACO74897.1| LivM [Laribacter hongkongensis HLHK9]
          Length = 370

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 94/349 (26%), Positives = 152/349 (43%), Gaps = 4/349 (1%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           + L++  +I   +     L +  FL                L+Y+M A GL+IVVG  GL
Sbjct: 2   MTLSRKAQIALFILCGILLAVLPFLVGKTLGNSWVRTLDFALLYIMLALGLNIVVGFAGL 61

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV---SAMISGACGMIMGLPSLKFRGDYL 122
           L L  +  YA+GAY+Y +L S +    W    +    A ++   G+++G P LK RGDYL
Sbjct: 62  LDLGYIAFYAVGAYTYALLNSPHFDIFWAWWMILPVGAFLAAVFGIMLGTPVLKLRGDYL 121

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           AI TL   EI +  L       N   G    + +  +     SL +        V     
Sbjct: 122 AIVTLGFGEIIRIFLNNLNAPVNITNGPQGINMIRPVEVAGVSLGKSLTVMGVTVNSVYL 181

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            YY+ L +  L+  +   L+ + I  AW  +R++  A  ++   I   KL AFA+ + F 
Sbjct: 182 YYYLFLILTILTVVVCSRLQHSRIGRAWVALREDDIAASAMGLNIRNIKLLAFALGATFG 241

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+AG  F++ +  +SP+ F   E+I+V+S+V+LGGM  +  +     +L    E+   + 
Sbjct: 242 GVAGGLFSSFQGFVSPESFGLLESIMVLSMVVLGGMGHIPGVILGAVLLTVTPEILRDVI 301

Query: 303 FYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                                L  +AL LV+L+R   L   +       
Sbjct: 302 GPVQMMAFGKMLIDPENARMLLFGLALILVMLLRPEGLWPNKRRKAEFH 350


>gi|161521295|ref|YP_001584722.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
 gi|189352533|ref|YP_001948160.1| branched-chain amino acid transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|160345345|gb|ABX18430.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
 gi|189336555|dbj|BAG45624.1| branched-chain amino acid transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 389

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 86/346 (24%), Positives = 151/346 (43%), Gaps = 17/346 (4%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
           K+   +     ++   F+       Y   +    ++YVM A GL++VVG  GLL L  + 
Sbjct: 22  KLTVGIITAAFVIAAPFVIGMAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIA 81

Query: 73  AYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLK 116
            YA+GAY+  +L S +                 +   L+IP +  ++   G+++G P+L+
Sbjct: 82  FYAVGAYTTALLSSPHLSSQFEWIAHFAPNGLHVPFVLIIPCAMALAALFGVLLGAPTLR 141

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
            RGDYLAI TL   EI +  +       N   G      +  +     SL +        
Sbjct: 142 LRGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPIHVGDFSLAQTHSLFGLS 201

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
                  YYV +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA
Sbjct: 202 FPSVYSYYYVFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRDVKLLAFA 261

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           + ++F G++GA F A +  +SP+ F   E+I+V++ V+LGGM  +  +     +L  + E
Sbjct: 262 MGASFGGLSGAMFGAFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLPE 321

Query: 297 LCCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                     + +   +     +    +  +A+ L++L RS  L  
Sbjct: 322 FFRSTIGPLQHMIFGDEIVDTEVIRQLVYALAMVLIMLYRSEGLWP 367


>gi|237806915|ref|YP_002891355.1| leucine/isoleucine/valine transporter permease subunit [Tolumonas
           auensis DSM 9187]
 gi|237499176|gb|ACQ91769.1| inner-membrane translocator [Tolumonas auensis DSM 9187]
          Length = 415

 Score =  138 bits (348), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 107/326 (32%), Positives = 163/326 (50%), Gaps = 24/326 (7%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
            + + +  +G  ILIYVM   GL+I VG  GLL L  V  YAIGAY+Y +L    GLS W
Sbjct: 106 FASRNLLDLGTLILIYVMLGLGLNIQVGLAGLLDLGYVGFYAIGAYTYALLNQYLGLSFW 165

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + +P++  ++   G ++G P L+ RGDYLAI TL   EI + +L     IT G  GI   
Sbjct: 166 ICLPLAGGMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIMLNNLTTITGGPNGISGI 225

Query: 154 DRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
            +    G           R+   FF          IF+Y + + +  L+  +I  L R  
Sbjct: 226 PKPTLFGLEFSRRAEDGGRTFHEFFGISYDANYKIIFLYVMAVLLVLLTLLVIKRLLRMP 285

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +  AW  +RD++ A  SL       KL+AF++ +AF G AG+FFAA +  ISP+ F F E
Sbjct: 286 LGRAWEALRDDEIACRSLGLNPTIIKLTAFSIGAAFAGFAGSFFAARQGFISPESFTFIE 345

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           + I+++IV+LGGM SL+ +  A  I+  + EL                 +FN     +  
Sbjct: 346 SAIILAIVVLGGMGSLAGVVLAAIIMTVLPEL----------------RAFNEYRMLMFG 389

Query: 326 IALFLVILMRSHSLLRLRTPSNFLER 351
           + + +++L R   L+ +      L +
Sbjct: 390 LLMVVMMLWRPQGLVPMTRHHVELPK 415


>gi|167572373|ref|ZP_02365247.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia oklahomensis C6786]
          Length = 423

 Score =  138 bits (348), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 100/342 (29%), Positives = 160/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+V+ L+   F+      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 97  AIVWALVAIGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GL+ W  +P++A+ S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 157 YTYALLNQYFGLTFWECLPLAALASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 217 NLTSVTGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHVVIFLYLIALV 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + ++F G+ GAFF
Sbjct: 277 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEIARGFAEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 392 ----------RMLMFGLVMVLMMMWRPQGLLPASRPHVELPQ 423


>gi|156936385|ref|YP_001440301.1| leucine/isoleucine/valine transporter permease subunit [Cronobacter
           sakazakii ATCC BAA-894]
 gi|156534639|gb|ABU79465.1| hypothetical protein ESA_04285 [Cronobacter sakazakii ATCC BAA-894]
          Length = 426

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IYV+   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYVILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPLAGLVAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          I++Y V L +   S  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGVKYDPSDRVIWLYLVALLLVVFSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL       KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL   +N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LVLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|319944631|ref|ZP_08018898.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Lautropia mirabilis ATCC
           51599]
 gi|319742070|gb|EFV94490.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Lautropia mirabilis ATCC
           51599]
          Length = 415

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 101/342 (29%), Positives = 160/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V  ++L   +      +    +   +LIYVM A GL+IVVG  GLL L  V  YA+GA
Sbjct: 89  VLVALIILAAIVWPFFGSRNQVDIATVVLIYVMLALGLNIVVGFAGLLDLGFVGFYAVGA 148

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L    G   W  +PVS  ++   G ++G P L+ RGDYLAI TL   EI + +LI
Sbjct: 149 YTYALLYQWLGWGFWQALPVSGAMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLLI 208

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
                T G  GI    +    G  +          +  +   +  S     I++Y + L 
Sbjct: 209 NLTDWTGGPDGISGIPKPTVFGYEMSRKASEAGAQTFHQLMGWKFSNQDMVIYLYLMALV 268

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  ++  +   L R  +  AW  +R+++ A  SL       KLSAF + + F G  GAFF
Sbjct: 269 LALITLFVSNRLVRMPVGRAWEALREDEIACRSLGLNPTRIKLSAFTLGAMFAGFGGAFF 328

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  IL  + E+      Y     
Sbjct: 329 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAIILTVLPEMAREFADY----- 383

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL ++ P   L R
Sbjct: 384 ----------RMLIFGLVMVLMMIWRPEGLLPVKRPHVELTR 415


>gi|150391808|ref|YP_001321857.1| inner-membrane translocator [Alkaliphilus metalliredigens QYMF]
 gi|149951670|gb|ABR50198.1| inner-membrane translocator [Alkaliphilus metalliredigens QYMF]
          Length = 360

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 94/329 (28%), Positives = 161/329 (48%), Gaps = 28/329 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +   + L L L    S +Y+  + I I +Y + +  L +V G  G +SL     YAIG
Sbjct: 28  IVIALLITLVLALPYIISSQYVLRIIIMIGVYSILSLSLGLVTGYAGQVSLGHAAFYAIG 87

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL   YG+S ++ +PV+AMI+  CG+++GLP+L+  G YLAI TL   EI + +L
Sbjct: 88  AYTSAILSVNYGISFFITVPVAAMIAALCGLLLGLPTLRLSGPYLAITTLGFGEIVRMVL 147

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
             W  +TNG  GI    R                      +    +YY++L    ++  +
Sbjct: 148 SNWDRVTNGPLGISRIPRPSI-------------LGIELTLANNGLYYLILIFVAITTVV 194

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +L + ++ +  A   +R+++ A   +   I + K+ AF VS+ F G+AGAF+A     I 
Sbjct: 195 MLAIVKSKMGRAMMALREDELAATMMGIRITYYKVVAFVVSAFFSGLAGAFYAHMIRFID 254

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F F  +I+++SIVILGGM ++  +   +A+LI   E    +  Y             
Sbjct: 255 PNSFTFDTSILILSIVILGGMGTIKGMFLGSALLISFPEFARFLQAY------------- 301

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                +  + L +++  R   +L  +  +
Sbjct: 302 --RFVVYGVVLIMMMRYRPQGILGGQKKT 328


>gi|302546241|ref|ZP_07298583.1| putative branched chain amino acid transport permease [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302463859|gb|EFL26952.1| putative branched chain amino acid transport permease [Streptomyces
           himastatinicus ATCC 53653]
          Length = 579

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 88/362 (24%), Positives = 143/362 (39%), Gaps = 34/362 (9%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
            RL+        L +V  L+  L    T+ +     +G+ I I+   A GL+IVVG  GL
Sbjct: 212 TRLSGLTSTYRSLTLVAALVTALVFPFTQDKASYTELGVNIAIFATVALGLNIVVGLAGL 271

Query: 66  LSLNCVIAYAIGAYSYVI------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           L L  V    +GAY+  +               W  +   A+ S   G+++G P+L+ RG
Sbjct: 272 LDLGYVAFLGVGAYTAALVSGTAASTIHVTFPFWAAMLAGALASLVFGVLIGAPTLRLRG 331

Query: 120 DYLAIATLIMSEIFQNILIKWKP-----ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
           DYLAI TL   EIF+  +          +TNG  G+     L   G        F  F  
Sbjct: 332 DYLAIVTLGFGEIFRIAVSNLDGTSGPSVTNGPNGVPNIPPLEIFGFNFDDEHSFAGFTL 391

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                    Y ++L +  +   I      + I  AW  IR+++ A  ++       KL A
Sbjct: 392 DSNSN---YYLLMLLVTVIVVLIFSRAGNSRIGRAWVAIREDETAATAMGINGFRVKLIA 448

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENI-----IVISIVILGGMTSLSKIAKATA 289
           FA+ +   G+AG  +A  +  + P+ + F+  +      +++ VILGGM ++       A
Sbjct: 449 FALGATLAGVAGTIWAHVQTTVVPEQYVFAGPVPPNSTFLLAAVILGGMGTIGGPLLGAA 508

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
           +L  + E    +  Y                     IAL L++  R   ++  R      
Sbjct: 509 LLFLIPEKLEFLQDY---------------QLLAFGIALILLMRFRPEGIIPNRRQQLEY 553

Query: 350 ER 351
             
Sbjct: 554 HE 555


>gi|167565275|ref|ZP_02358191.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia oklahomensis EO147]
          Length = 423

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 100/342 (29%), Positives = 160/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+V+ L+   F+      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 97  AIVWALVAIGFVWPFFGSRGAIDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GL+ W  +P++A+ S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 157 YTYALLNQYFGLTFWECLPLAALASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 217 NLTSVTGGPDGISGIPKPTVFGFEMARSASVDGAKTFHELIGLEYSGEHVVIFLYLIALV 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + ++F G+ GAFF
Sbjct: 277 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTLLPEIARGFAEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 392 ----------RMLMFGLVMVLMMMWRPQGLLPASRPHVELPQ 423


>gi|270264296|ref|ZP_06192563.1| transporter [Serratia odorifera 4Rx13]
 gi|270041945|gb|EFA15042.1| transporter [Serratia odorifera 4Rx13]
          Length = 423

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 104/341 (30%), Positives = 162/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   +++          +    +    LIYVM   GL++VVG  GLL L     YAIGA
Sbjct: 90  LLAAAIIVAAIAWPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 149

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   YGL  W  +P++ +++   G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 150 YTYALLNHYYGLGFWESLPLAGIVTAIFGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 209

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +  F G             +   FF          +F+Y V L 
Sbjct: 210 NNTEITGGPNGISQIPKPTFFGLEFNRSARDGGWDTFHNFFGLKYDPSDRIVFLYLVALL 269

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 270 LVVLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLF 329

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F E+  V++IV+LGGM S   +  A  +L+   E+   +N Y     
Sbjct: 330 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSREMMRDLNEY----- 384

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        L+   + L+++ R   LL ++ P   L+
Sbjct: 385 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 415


>gi|163856964|ref|YP_001631262.1| putative ABC transport protein, ATP-binding component [Bordetella
           petrii DSM 12804]
 gi|163260692|emb|CAP42994.1| putative ABC transport protein, ATP-binding component [Bordetella
           petrii]
          Length = 361

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 97/339 (28%), Positives = 155/339 (45%), Gaps = 4/339 (1%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + ++   L  L      + +    +    L+YVM A GL+IVVG  GLL L  +  Y
Sbjct: 15  LFGIVLIGVALAVLPFALGLAGQSWVRILNFALLYVMLALGLNIVVGFAGLLDLGYIAFY 74

Query: 75  AIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           A+GAY++ +L S +    L  W ++P+S  ++   G+++G P+LK RGDYLAI TL   E
Sbjct: 75  AVGAYAWALLASPHFGLHLPFWAILPISLGLACVFGVLLGAPTLKLRGDYLAIVTLGFGE 134

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +  L       N   G    +R+           R        V      YY+LLG+ 
Sbjct: 135 IIRIFLNNLNAPVNITNGPQGINRIDGFKVGEFMFGRTETLLGLRVTGPEKYYYLLLGIT 194

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L   + + L+ + I  AW  IR+++ A  ++       KL AFA+ ++F G+AGA FAA
Sbjct: 195 LLIVLVCVRLQNSRIGRAWEAIREDEIAAKAMGINTRNVKLLAFAMGASFGGVAGALFAA 254

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  +SP+ F  +E+I V+ +V+LGGM ++  +     +L  + E            +  
Sbjct: 255 MQGFVSPESFSLTESISVLCMVVLGGMGNIPGVILGAILLAALPEFLRATVEPLQRLVFG 314

Query: 312 -FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
                       L  +A+  V+L R   L         L
Sbjct: 315 EVVLDPEGIRMLLFGLAMVCVMLFRPAGLWPSAVRKREL 353


>gi|330831656|ref|YP_004394608.1| branched-chain amino acid ABC transporter permease [Aeromonas
           veronii B565]
 gi|328806792|gb|AEB51991.1| ABC-type branched-chain amino acid transporter, permease protein
           [Aeromonas veronii B565]
          Length = 422

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 163/342 (47%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
                +LLF       + +    +    LIY+M   GL++VVG  GLL L  V  YA+GA
Sbjct: 96  LTAVLVLLFAVSWPFMASRGAIDLATLTLIYIMLGLGLNVVVGLAGLLDLGYVGFYAVGA 155

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           YSY +L + +GLS W  +P++ +++   G ++G P L+ RGDYLAI TL   EI + +L 
Sbjct: 156 YSYALLNTYFGLSFWECLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLN 215

Query: 139 KWKPITNGKAGIYVADRLYFLGTT---------VRSLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G             +   FF    +     IF+Y + L 
Sbjct: 216 NMTTLTGGPNGISGIPKPTLGGLEFNRTVKDGGFDTFHNFFGITYNANHKVIFLYLMALV 275

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  ++  +I  L R  +  AW  +R+++ A  SL       KL+AF + + F G AG+FF
Sbjct: 276 LVVVTLFVINRLLRMPLGRAWEALREDEIACKSLGLNPTIIKLTAFTIGATFAGFAGSFF 335

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A+ +  ISP+ F F E+ IV++IV+LGGM S   +  A  ++  + EL    N Y     
Sbjct: 336 ASRQGFISPESFVFIESAIVLAIVVLGGMGSQIGVVLAAIVMTVLPELAREFNEY----- 390

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + +  +++ R   LL +  P   L++
Sbjct: 391 ----------RMLMFGLLMVFMMIWRPQGLLPMTRPHLELKK 422


>gi|206561046|ref|YP_002231811.1| putative transport system permease [Burkholderia cenocepacia J2315]
 gi|198037088|emb|CAR53009.1| putative transport system permease protein [Burkholderia
           cenocepacia J2315]
          Length = 389

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 84/345 (24%), Positives = 154/345 (44%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  L     ++    +  +    Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  VVIGLLTAVLVIAAPIVIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                 +   L++P++  ++   G+++G P+L+ 
Sbjct: 83  YAVGAYTAALLSSPHLTSQFEWIAALAPNGLHVPFLLIVPIAMALAATFGILLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +     +L +        +
Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHVGGFNLSQTHTLFGFQL 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYMYYYLFVLCSLLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++G+ F A +  +SP+ F F E+I+V++ V+LGGM  +  +     +L    E 
Sbjct: 263 GASFGGLSGSMFGAFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPEF 322

Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                    ++L   D     +    L  +A+ +++L RS  L  
Sbjct: 323 LRSTMSPLQHALFGHDIVDTEVIRQALYGLAMVIIMLYRSEGLWP 367


>gi|261819469|ref|YP_003257575.1| leucine/isoleucine/valine ABC transporter permease [Pectobacterium
           wasabiae WPP163]
 gi|261603482|gb|ACX85968.1| inner-membrane translocator [Pectobacterium wasabiae WPP163]
          Length = 424

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 109/329 (33%), Positives = 158/329 (48%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    LIYVM   GL++VVG  GLL L     YAIGAY+Y +L   YGL
Sbjct: 103 WPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ M +   G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWESLPLAGMAAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  FLG             +   FF          IF+Y V L +  L+  +I  L
Sbjct: 223 SQIPKPTFLGLEFGRSARDGGWDTFHNFFGLQYDPSDRVIFLYLVALLLVILTLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +RD++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALRDDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL   +N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            L+   + L+++ R   LL +  P   L+
Sbjct: 388 LLLGALMVLMMIWRPQGLLPMTRPEMKLK 416


>gi|134296669|ref|YP_001120404.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|134139826|gb|ABO55569.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia vietnamiensis G4]
          Length = 389

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 84/345 (24%), Positives = 154/345 (44%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  +     ++    +  +    Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  VLIGILTAAFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                 +   +++P++  ++   G+++G P+L+ 
Sbjct: 83  YAVGAYTAALLSSPHLTSQFEWIAALAPNGLHIPFLIIVPIAMALAATFGILLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +     +L +        +
Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHIGGFNLSQTHSLFGFQL 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYMYYYLFVLCSLLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA F A +  +SP+ F F E+I+V++ V+LGGM  +  +     +L    E 
Sbjct: 263 GASFGGLSGAMFGAFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPEF 322

Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                    ++L   D     +    L  +A+ +++L RS  L  
Sbjct: 323 LRSTMSPLQHALFGHDIVDTEVIRQALYGLAMVVIMLYRSEGLWP 367


>gi|62870127|gb|AAY18214.1| HmgF [Pseudomonas putida]
          Length = 431

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 92/371 (24%), Positives = 155/371 (41%), Gaps = 36/371 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            LL + +  L FL             +    ++YV+ A GL+IV+G  GLL +  +  YA
Sbjct: 25  LLLILGFIALPFLVEAIPMLGPTWVRILGFAMLYVLLALGLNIVIGYAGLLDMGYIGFYA 84

Query: 76  IGAYSYVILGSRY-----------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           IGAY Y +L S +              +W++IP++A+ +  CG+++G P LK RGDYLAI
Sbjct: 85  IGAYLYALLASPHLQMAGLLEAVLDWPVWVIIPLAAVAAAICGVLIGAPVLKLRGDYLAI 144

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR--------------FF 170
            TL   EI +  +       N   G      +  +     +                  +
Sbjct: 145 VTLGFGEIIRIFMNNLDQPVNLTNGPQGISNIAPMHVDFGAWAHAPGAGATPVLSLQQSW 204

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                 V   I  Y   L +  L   +   L  + I  AW  +R+++ A  ++       
Sbjct: 205 SLFGLPVSPVISYYLFFLFVVILCIVLSKRLEVSRIGRAWMALREDEVAAEAMGLNKRNL 264

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           KL AFA+ + F G++G  F++ +  +SP+ F   E+I+V+++V+LGGM S+  +     I
Sbjct: 265 KLLAFAMGATFGGVSGVLFSSYQGFVSPESFTLMESIMVLAMVVLGGMGSIRGVVLGALI 324

Query: 291 LIGVVELCCGMNFYYFNSL-----------LKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           L  + EL   +  +    +           L+     +     +  +AL LV+  R   L
Sbjct: 325 LSVMPELFRDLVNWVQPWVMDNVTFISRDILRNVLDASTLRMLVFGLALILVMRFRPEGL 384

Query: 340 LRLRTPSNFLE 350
                    L 
Sbjct: 385 WPSSRRRAELH 395


>gi|134293031|ref|YP_001116767.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|134136188|gb|ABO57302.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia vietnamiensis G4]
          Length = 389

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 86/346 (24%), Positives = 151/346 (43%), Gaps = 17/346 (4%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
           K+   +     ++   F+       Y   +    ++YVM A GL++VVG  GLL L  + 
Sbjct: 22  KLTVGIITAAFVIAAPFVIGMAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIA 81

Query: 73  AYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLK 116
            YA+GAY+  +L S +                 +   L+IP +  ++   G+++G P+L+
Sbjct: 82  FYAVGAYTTALLSSPHLSSQFEWIAHFAPNGLHVPFVLIIPCAMALAALFGVLLGAPTLR 141

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
            RGDYLAI TL   EI +  +       N   G      +  +     SL +        
Sbjct: 142 LRGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPIHVGDFSLAQTHSLFGLS 201

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
                  YYV +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA
Sbjct: 202 FPSVYSYYYVFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRDVKLLAFA 261

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           + ++F G++GA F A +  +SP+ F   E+I+V++ V+LGGM  +  +     +L  + E
Sbjct: 262 MGASFGGLSGAMFGAFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLPE 321

Query: 297 LCCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                     + +   +     +    +  +A+ L++L RS  L  
Sbjct: 322 FFRSTIGPLQHMIFGHEIVDTEVIRQLVYALAMVLIMLYRSEGLWP 367


>gi|296157149|ref|ZP_06839985.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295892485|gb|EFG72267.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 389

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 81/345 (23%), Positives = 149/345 (43%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   +     ++    +  T    Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  LTVGIITAICVIAAPMIIGTAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY   +L S +                 +   +++P +  ++   G+++G P+L+ 
Sbjct: 83  YAVGAYVAALLSSPHLSTQFEWIAHLAPNGLHVPFLIIVPCAMGLAALFGVLLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +     SL +         
Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITAIDPVHLGDFSLAQTHSLFGFQF 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    +   +   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYSYYYLFVIAALVVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA F + +  +SP+ F   E+I+V++ V+LGGM  +  +     +L  + E 
Sbjct: 263 GASFGGLSGAMFGSFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLPEF 322

Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                    N +   +     +    +  +A+ L++L RS  L  
Sbjct: 323 LRSTMGPLQNMIFGHEIVDTEVIRQLVYALAMVLIMLYRSEGLWP 367


>gi|295680831|ref|YP_003609405.1| ABC transporter [Burkholderia sp. CCGE1002]
 gi|295440726|gb|ADG19894.1| ABC transporter related protein [Burkholderia sp. CCGE1002]
          Length = 602

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 77/306 (25%), Positives = 137/306 (44%), Gaps = 30/306 (9%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y+  +G+ I+ Y +   GL+IVVG  GLL L     +AIGAY+  +L +    S W  
Sbjct: 30  SNYVIDVGLTIVTYSILGLGLNIVVGYAGLLDLGYAAFFAIGAYTTALLETLLQFSFWET 89

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +P S   +   G+++G P+L+ R DYLAI TL   EI + +      IT G  GI+    
Sbjct: 90  LPFSLAFAAVSGIVIGYPTLRLRSDYLAIVTLGFGEITRIVATNL-DITGGPNGIFGIAS 148

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
               G  + S                 +Y + +    +     + L ++ +  AW +IR+
Sbjct: 149 PSLFGFEISS--------------PQALYELGMAFLVVVLVFAIRLGQSRLGRAWTSIRE 194

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  ++    +  KL A+ + +   G+ G+ FAA    I P  F + +++ ++ +V+L
Sbjct: 195 DEAAAEAVGVPTLRVKLLAYVMGALIGGLGGSLFAARFGTIDPTGFTYLQSVTILIVVVL 254

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  S+  +     I+ G+ E+   +N               +       I L +++L+R
Sbjct: 255 GGRGSIPGVLLGAIIVAGLPEILRFLN---------------LWRIFAFAIGLVILMLLR 299

Query: 336 SHSLLR 341
              L  
Sbjct: 300 PQGLWP 305


>gi|317046497|ref|YP_004114145.1| inner-membrane translocator [Pantoea sp. At-9b]
 gi|316948114|gb|ADU67589.1| inner-membrane translocator [Pantoea sp. At-9b]
          Length = 423

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 105/342 (30%), Positives = 166/342 (48%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++  +++   +      +    +    LIYVM   GL++VVG  GLL L     YAIGA
Sbjct: 90  LLMVLMIVAAVIWPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 149

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YG   W  +P++ +++GA G+++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 150 YTFALLNHYYGFGFWQSLPLAGLVAGAFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 209

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +  F G             +    F          IF+Y V L 
Sbjct: 210 NNTAITGGPNGIAQIPKPTFFGLEFGRKVSEGGWGTFHEVFGMKYDPNDRVIFLYLVALL 269

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  II  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 270 LVVLTLIIINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 329

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y     
Sbjct: 330 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNEY----- 384

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        ++   + L+++ R   LL ++ P   L++
Sbjct: 385 ----------SMLVLGGLMVLMMIWRPQGLLPMKRPQLKLKQ 416


>gi|237728770|ref|ZP_04559251.1| leucine/isoleucine/valine transporter permease subunit [Citrobacter
           sp. 30_2]
 gi|226909392|gb|EEH95310.1| leucine/isoleucine/valine transporter permease subunit [Citrobacter
           sp. 30_2]
          Length = 425

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 104/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  LL+   +      +    +    +IY++   GL++VVG  GLL L     YAIGA
Sbjct: 91  LFLVALLVIAVVWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YGL  W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +  F G             +   FF          IF+Y V L 
Sbjct: 211 NNTEVTGGPNGISQIPKPTFFGLEFSRTAREGSWDTFSNFFNVKYDPSDRVIFLYLVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   S  +I  L R  +  AW  +R+++ A  SL       KL+AF +S+AF G AG  F
Sbjct: 271 LVVFSLFVINRLLRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y     
Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        ++   + L+++ R   LL +  P   L+
Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|33593705|ref|NP_881349.1| putative ABC transport protein, ATP-binding component [Bordetella
           pertussis Tohama I]
 gi|33601011|ref|NP_888571.1| putative ABC transport protein, ATP-binding component [Bordetella
           bronchiseptica RB50]
 gi|33563778|emb|CAE43020.1| putative ABC transport protein, ATP-binding component [Bordetella
           pertussis Tohama I]
 gi|33575446|emb|CAE32524.1| putative ABC transport protein, ATP-binding component [Bordetella
           bronchiseptica RB50]
 gi|332383108|gb|AEE67955.1| putative ABC transport protein, ATP-binding component [Bordetella
           pertussis CS]
          Length = 362

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 97/353 (27%), Positives = 160/353 (45%), Gaps = 4/353 (1%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+    +     + L  +A++  +L  L      + +    +    L+YVM A GL+IVV
Sbjct: 1   MTRQPNKSGLSARNLVGIALIGIVLAVLPFVLGMAGQSWVRILNFALLYVMLALGLNIVV 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           G  GLL L  +  YA+GAY++ +L S +    L  W ++P++  ++   G+++G P+LK 
Sbjct: 61  GFAGLLDLGYIAFYAVGAYTWALLASPHFGLHLPFWAILPMALGVACVFGVLLGAPTLKL 120

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  L       N   G    +R+           R         
Sbjct: 121 RGDYLAIVTLGFGEIIRIFLNNLNAPVNITNGPQGINRIDAFKVGDFVFGRTETILGIRF 180

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+L+ +  L   + + L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 181 TGPEKYYYLLVLLTLLIIVVCVRLQNSRIGRAWEAIREDEIAAKAMGINSRNIKLLAFAM 240

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G+AGA FAA +  +SP+ F  +E+I V+ +V+LGGM  +  +     IL  + E 
Sbjct: 241 GASFGGVAGALFAAMQGFVSPESFSLTESISVLCMVVLGGMGHIPGVILGAVILAVLPEF 300

Query: 298 CCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
              +     + L              L  +A+  V+L R   L         L
Sbjct: 301 LRAVVEPAQHLLFGAVVLDPEGIRMLLFGLAMVCVMLFRPAGLWPSAVRKREL 353


>gi|269795363|ref|YP_003314818.1| branched-chain amino acid ABC transporter permease [Sanguibacter
           keddieii DSM 10542]
 gi|269097548|gb|ACZ21984.1| ABC-type branched-chain amino acid transport system, permease
           component [Sanguibacter keddieii DSM 10542]
          Length = 439

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 79/360 (21%), Positives = 146/360 (40%), Gaps = 17/360 (4%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  ++   L LL +V  L +      T        +  Q  +Y + A GL++VVG  GLL
Sbjct: 61  RPTQWALGLPLLVLVALLPILQIPVLTTVGTNFGGVMAQFGMYALIAIGLNVVVGQAGLL 120

Query: 67  SLNCVIAYAIGAYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMGL 112
            L  +  YAIGAY+  +L S                  +    +P++  I+   G+++G 
Sbjct: 121 DLGYIGFYAIGAYTVALLTSPSSPWNQTGEGGWLSQDWAWLAALPIAVAITALSGLLIGS 180

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF-R 171
           P+L+ RGDYLAI TL   EI + +      IT G  G+          +       F   
Sbjct: 181 PTLRLRGDYLAIVTLGFGEIVRLLADNLDGITGGGRGLNQVAYPRLGVSETNPNGVFSAG 240

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
             S  +   ++ Y++ + +   +   +  L R+ +  +W  IR+++ A   +       K
Sbjct: 241 SGSGALNSGVWWYWLSIVLIVAALLFVGNLERSRVGRSWVAIREDEDAAEIMGVPTFRFK 300

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           L AF + ++  G +GA +A     ++P  F    +++ +  V+LGG  +   +     ++
Sbjct: 301 LWAFVIGASIGGASGALYAGQVQFVNPTNFNVINSVLFLCAVVLGGQGNKLGVILGAFVI 360

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           + +      +       +                IAL ++++ R   LL +R       R
Sbjct: 361 VYLPNFF--LGRTELFGIPIDGTQIAEYRYLFFGIALMVLMVFRPQGLLPVRQKLLTYGR 418


>gi|283835849|ref|ZP_06355590.1| high-affinity branched-chain amino acid transport protein
           [Citrobacter youngae ATCC 29220]
 gi|291068020|gb|EFE06129.1| high-affinity branched-chain amino acid transport protein
           [Citrobacter youngae ATCC 29220]
          Length = 425

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 104/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  LL+          +    +    +IY++   GL++VVG  GLL L     YAIGA
Sbjct: 91  LFLVALLVIAVAWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YGL  W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY---------EIFMYYVLLG 189
               IT G  GI    +  F G       R   + +    +          IF+Y V L 
Sbjct: 211 NNTEITGGPNGISQIPKPTFFGLEFSRSAREGGWDTFSNFFNVKYDPSDRVIFLYLVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   S  +I  L R  +  AW  +R+++ A  SL       KL+AF +S+AF G AG  F
Sbjct: 271 LVVFSLFVINRLLRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y     
Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        ++   + L+++ R   LL +  P   L+
Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|183598026|ref|ZP_02959519.1| hypothetical protein PROSTU_01382 [Providencia stuartii ATCC 25827]
 gi|188022805|gb|EDU60845.1| hypothetical protein PROSTU_01382 [Providencia stuartii ATCC 25827]
          Length = 427

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 103/340 (30%), Positives = 162/340 (47%), Gaps = 23/340 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   +++   +      +    +    LIYVM   GL++VVG  GLL L     YAIGA
Sbjct: 91  ILALVIVIAAIIWPFVVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYAGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YG   W  +P++ + +   G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTFALLNHYYGFGFWESLPIAGLTAALAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190
               IT G  GI    +    G            +   FF    +     IF+Y+V L +
Sbjct: 211 NNTEITGGPNGISQLPKPTLFGLEFSRTAKEGWDTFHNFFGLDYNAGDRIIFLYFVALLL 270

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L+  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FA
Sbjct: 271 VLLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLFA 330

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           A +  ISP+ F F E+  V++IV+LGGM S + +  A  IL+   E+   +N Y      
Sbjct: 331 ARQGFISPESFTFVESAFVLAIVVLGGMGSQTSVILAAIILVVSREMMRDLNAY------ 384

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                       L+   + L+++ R   LL ++     L+
Sbjct: 385 ---------SMLLLGALMVLMMIWRPQGLLPMKRRQMKLK 415


>gi|311695948|gb|ADP98821.1| leucine/isoleucine/valine transporter permease subunit [marine
           bacterium HP15]
          Length = 423

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 102/341 (29%), Positives = 162/341 (47%), Gaps = 24/341 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+  +++          +    +   +LIY+M A GL++VVG  GLL L  V  YA+GAY
Sbjct: 96  VLTGIVVLALFWPFFVSRGAVDLATLVLIYIMLALGLNVVVGLAGLLDLGYVAFYAVGAY 155

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           ++ +L    G+S WL +P+ A+++   G+++G P L+ RGDYLAI TL   EI + +L  
Sbjct: 156 TFALLSQYTGISFWLALPIGALLAALFGLVLGFPVLRLRGDYLAIVTLGFGEIIRILLNN 215

Query: 140 WKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           W  +T G  GI         G             S    F    S     IF+Y + L +
Sbjct: 216 WTTLTGGPNGIGGIPDPTLFGMEFGRRVKEEGNTSFHETFGIAYSGEHKVIFLYLIALVL 275

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              +A +I    R  +  AW  +R+++ A  SL  +    KLSAF + + F G AG  FA
Sbjct: 276 AVFTALVIRRFMRMPVGRAWEALREDEIAARSLGLSRTAVKLSAFTIGAFFAGFAGTVFA 335

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           + +  ISP+ F F E+ I+++IV+LGGM S   +  A   +  + EL    + Y      
Sbjct: 336 SKQGFISPESFVFLESAIILAIVVLGGMGSQIGVVLAAIAVTILPELAREFSEY------ 389

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                       +   A+ L+++ R   L+ +R     L+R
Sbjct: 390 ---------RMLIFGAAMVLMMVWRPQGLMPMRRIHIELKR 421


>gi|170744528|ref|YP_001773183.1| ABC transporter-like protein [Methylobacterium sp. 4-46]
 gi|168198802|gb|ACA20749.1| ABC transporter related [Methylobacterium sp. 4-46]
          Length = 608

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 70/337 (20%), Positives = 137/337 (40%), Gaps = 30/337 (8%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
                +   +  LL       +           Y+ ++ +Q   Y +   GL++V+G  G
Sbjct: 13  PAAPARRLPLGSLLYAALAAGIVALAVTNPVNGYLLNILMQAATYAIAVIGLTVVLGLCG 72

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            ++L     + +GAY+  +     G+S WL +    + +   G  +G  +L+  G YLA+
Sbjct: 73  QINLAQAAFFGLGAYAVGLGTVDLGVSFWLCLAAGMLAALVAGAFLGASTLRLGGHYLAM 132

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            T+   +I   +L+ W P+T+G  G+    R                             
Sbjct: 133 VTISFQQILTLVLVNWIPVTHGPDGVPRIQRPALFSD------------------GQAYL 174

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            + L +  + A ++  + RT +  A R +RDN+ A       +   K+ AFA+ +   G+
Sbjct: 175 GLCLAVLAVVAWLVWHMPRTRLGRAMRAVRDNELAAGVTGIDVYRTKVMAFAIGALLAGL 234

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            G  FA S   +SPD F F+E+I+ +++ +LGG+ S +     T +LI + E    +   
Sbjct: 235 GGGLFAGSFTYVSPDQFSFAESIVFLTMALLGGVGSPAGAVIGTGLLILIPEWLRFLKE- 293

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                          +  +  +A+ L+++     +  
Sbjct: 294 -----------IPGLYLAIYGLAVILIVVFMPEGIWG 319


>gi|261341946|ref|ZP_05969804.1| high-affinity branched-chain amino acid transport protein
           [Enterobacter cancerogenus ATCC 35316]
 gi|288315852|gb|EFC54790.1| high-affinity branched-chain amino acid transport protein
           [Enterobacter cancerogenus ATCC 35316]
          Length = 425

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 101/330 (30%), Positives = 157/330 (47%), Gaps = 24/330 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IYV+   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFVVSRGTVDIATLTMIYVILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+    +T G  GI
Sbjct: 163 GFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEVTGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          I++Y V L +  ++  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGIKYDPSDRVIWLYLVALLLVVITLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL       KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            ++   + L+++ R   LL +  P   L+ 
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLKE 417


>gi|116747832|ref|YP_844519.1| ABC transporter-like protein [Syntrophobacter fumaroxidans MPOB]
 gi|116696896|gb|ABK16084.1| ABC transporter related [Syntrophobacter fumaroxidans MPOB]
          Length = 614

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 67/333 (20%), Positives = 128/333 (38%), Gaps = 35/333 (10%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            ++  +L L  V++ L             Y+  +   + +  M   GL++++ S G +SL
Sbjct: 8   RQWRALLPLAVVLWGL------PLVMRNDYLLLLCNVMALNAMVVLGLNLLIASTGQVSL 61

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                Y +GAY   I  + +   ++  +  +A        ++ LP+LK  G YL +ATL 
Sbjct: 62  GHAAFYGLGAYLSAIASTTWQWPLFAALAFAAASVAVIAFLLALPTLKLEGHYLVMATLG 121

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
            + I      + + +T G +G     RL      + + +RF              Y  + 
Sbjct: 122 FNIIVFICFNQMESVTGGPSGFSGIPRLALGSFALNTDLRF--------------YVFIW 167

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  ++ ++ L L  + +  A + I   +     L       K+  F +S+ +  +AG  
Sbjct: 168 TLFLVAFALTLNLLDSRLGRALKAIHQKELTAEVLGIPARRYKIVTFVLSTVYAAVAGFS 227

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +A     ISP  F    ++ ++++V +GGM SL      T +L  + E            
Sbjct: 228 YAHYVTFISPKTFDIFYSVQIVTMVAVGGMGSLWGGLAGTILLTALPEFLHHFED----- 282

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                      H  L  + L  V++     LL 
Sbjct: 283 ----------LHVLLYGLTLMGVLVFCPQGLLP 305


>gi|107023434|ref|YP_621761.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054]
 gi|116690516|ref|YP_836139.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
 gi|170733857|ref|YP_001765804.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
 gi|254247442|ref|ZP_04940763.1| Inner-membrane translocator [Burkholderia cenocepacia PC184]
 gi|105893623|gb|ABF76788.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116648605|gb|ABK09246.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia cenocepacia HI2424]
 gi|124872218|gb|EAY63934.1| Inner-membrane translocator [Burkholderia cenocepacia PC184]
 gi|169817099|gb|ACA91682.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
          Length = 389

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 83/345 (24%), Positives = 154/345 (44%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +     ++    +  +    Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  VVIGILTAAFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                 +   L++P++  ++   G+++G P+L+ 
Sbjct: 83  YAVGAYTAALLSSPHLTSQFEWIAALAPNGLHVPFLLIVPIAMALAATFGILLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +     +L +        +
Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHVGGFNLSQTHTLFGFQL 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYMYYYLFVLCSLLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++G+ F A +  +SP+ F F E+I+V++ V+LGGM  +  +     +L    E 
Sbjct: 263 GASFGGLSGSMFGAFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPEF 322

Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                    ++L   D     +    L  +A+ +++L RS  L  
Sbjct: 323 LRSTMSPLQHALFGHDIVDTEVIRQALYGLAMVIIMLYRSEGLWP 367


>gi|283787913|ref|YP_003367778.1| high-affinity branched-chain amino acid ABC transporter permease
           [Citrobacter rodentium ICC168]
 gi|282951367|emb|CBG91066.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Citrobacter rodentium ICC168]
          Length = 425

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 104/342 (30%), Positives = 161/342 (47%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  LL+          +    +    +IY++   GL++VVG  GLL L     YAIGA
Sbjct: 91  LFLIALLVVAVAWPFMVTRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YGL  W  +P++ + + A G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLAAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G             +   FF          IF+Y V L 
Sbjct: 211 NNTEVTGGPNGISQIPKPTLFGLEFSRTAREGGWDTFSNFFGIKYDPSDRVIFLYLVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  LS  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 271 LVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y     
Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        ++   + L+++ R   LL +  P   L+R
Sbjct: 386 ----------SMLMLGGLMVLMMIWRPEGLLPMTRPQLKLKR 417


>gi|186475357|ref|YP_001856827.1| inner-membrane translocator [Burkholderia phymatum STM815]
 gi|184191816|gb|ACC69781.1| inner-membrane translocator [Burkholderia phymatum STM815]
          Length = 389

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 86/345 (24%), Positives = 149/345 (43%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   +     ++    +       Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  LTVGIITAVFVIAAPMIIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                 +   ++IP +  I+  CG+I+G P+L+ 
Sbjct: 83  YAVGAYTAALLSSPHLSSQFEWIAHLAPAGLHVPFLIIIPCAMAIAAICGVILGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  L       N   G      +  +     SL +         
Sbjct: 143 RGDYLAIVTLGFGEIVRIFLNNLDRPVNITNGPKGITGIDPIHVGDFSLAQTHSLFGLTF 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YYV +        +   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYSYYYVFVLCALFVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRDVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA F A +  +SP+ F   E+I+V++ V+LGGM  +  +     +L  + E 
Sbjct: 263 GASFGGLSGAMFGAFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLPEF 322

Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                    + +   +     +    +  +A+ L++L RS  L  
Sbjct: 323 LRSTMGPLQHMIFGHEIVDTEVIRQLVYALAMVLIMLYRSEGLWP 367


>gi|187921066|ref|YP_001890098.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
 gi|187719504|gb|ACD20727.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
          Length = 389

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 84/348 (24%), Positives = 146/348 (41%), Gaps = 17/348 (4%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              +         +     L    +  Y   +    ++YVM A GL+IVVG  GLL L  
Sbjct: 20  KKYLTISALTAIGVTALPLLIGAAAGNYGVRVLDFAMLYVMLALGLNIVVGFAGLLDLGY 79

Query: 71  VIAYAIGAYSYV----------------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
           +  YA+GAY+                  +  S +    W ++PV+ +++   G+ +G P+
Sbjct: 80  IAFYAVGAYTAALLTSPHLAAHFEWIGHMWPSGFHAPYWFVMPVAMVLAAIAGICLGAPT 139

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
           L+ RGDYLAI TL   EI +  +       N   G      +  +     +L     F  
Sbjct: 140 LRLRGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPQGITGVAPVTVAGFNLSETHAFLG 199

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                    YYV +    L   +   L+ + I  AW  IR+++ A  ++       KL A
Sbjct: 200 FQFTTVYMYYYVFVLCSLLVVWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLA 259

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           FA+ ++F G++GA FA  +  +SP+ F   E++ V++ V+LGGM  +  +     +L  +
Sbjct: 260 FAMGASFGGLSGAMFAGFQGFVSPESFTLWESVTVLACVVLGGMGHIPGVIFGAVLLAIL 319

Query: 295 VELCCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            E+         N++         +    L  +A+ +++L R   L  
Sbjct: 320 PEILRSTMTPLQNAIFGHVIVDTEVIRQLLYGLAMVIIMLRRPEGLWP 367


>gi|298292106|ref|YP_003694045.1| inner-membrane translocator [Starkeya novella DSM 506]
 gi|296928617|gb|ADH89426.1| inner-membrane translocator [Starkeya novella DSM 506]
          Length = 481

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 112/357 (31%), Positives = 179/357 (50%), Gaps = 22/357 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L   A+++P +    +G     +Y+  +GI IL YVM  WGL+IVVG  GLL L  V  Y
Sbjct: 113 LFGFAILFPAIAAYGMGGLSESRYLIDLGILILTYVMLGWGLNIVVGLAGLLDLGYVAFY 172

Query: 75  AIGAYSYVILGS----------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           A+GAY+Y +L +                    + W+ +PV+ + +G  GMI+G P L+ R
Sbjct: 173 AVGAYTYALLATSEPVNAFFGGLLGETFWANWAFWICLPVAGLFAGLWGMILGFPVLRLR 232

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPS 174
           GDYLAI TL   EI + +LI W   T G AGI    R  F G             F    
Sbjct: 233 GDYLAIVTLAFGEIIRLVLINWVDFTGGGAGIASIPRATFFGIPFNSDEDGFAALFGLEF 292

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
             +   IF+Y+V+L +  ++A   + LR+  +  AW  +R+++ A  SL       KL+A
Sbjct: 293 DPMHRIIFLYFVILALALVTAFATVRLRKLPVGRAWEALREDEIACRSLGINTTNTKLTA 352

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           FA  + F G AG FFA     +SP+ F F  + ++++IV+LGGM S   +A A  +++G 
Sbjct: 353 FATGAMFGGFAGCFFAVRAGFVSPESFTFDVSAMILAIVVLGGMGSQIGVALAATVMMGG 412

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +E+   +   +   +   D   ++    +   A+  +++ +   L+  R P+ FL+ 
Sbjct: 413 MEMLRNLG--FLKQIFGNDFDPSLYRMLIFGFAMVAIMVWKPRGLVSTRDPTIFLKE 467


>gi|209517251|ref|ZP_03266095.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209502260|gb|EEA02272.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 389

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 86/345 (24%), Positives = 148/345 (42%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   L     ++    +       Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  VTIGLLTAAFVVAAPMIIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                    +++ PV+  I+   G+++G P+L+ 
Sbjct: 83  YAVGAYTAALLSSPHLSTQFEWIAQLAPGGLHAPFFIIAPVAMAIAACFGVVLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      L  +     SL +         
Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGLDPIHIGDHSLAQSHSLFGFQF 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YYV +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYSYYYVFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRDVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA F   +  +SP+ F   E+I+V++ V+LGGM  +  +     +L  + E 
Sbjct: 263 GASFGGLSGAMFGMFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLPEA 322

Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                    + L   +     +    +  +A+ L++L RS  L  
Sbjct: 323 LRSTMGPLQHMLFGHEIVDTEVIRQLVYALAMVLIMLYRSEGLWP 367


>gi|146313491|ref|YP_001178565.1| leucine/isoleucine/valine transporter permease subunit
           [Enterobacter sp. 638]
 gi|145320367|gb|ABP62514.1| L-isoleucine ABC transporter membrane protein / L-valine ABC
           transporter membrane protein / L-leucine ABC transporter
           membrane protein [Enterobacter sp. 638]
          Length = 425

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 103/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  LL+          +    +    +IYV+   GL++VVG  GLL L     YAIGA
Sbjct: 91  LFLIALLVAAVAWPFMVSRGTVDIATLTMIYVILGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YGL  W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  G+    +  F G             +   FF          I++Y V L 
Sbjct: 211 NNTEITGGPNGVSQIPKPTFFGLEFSRTAREGGWDTFSNFFGIKYDPSDRVIWLYLVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  ++  +I  L R  +  AW  +R+++ A  SL       KL+AF +S+AF G AG  F
Sbjct: 271 LVVVTLFVINRLLRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y     
Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        ++   + L+++ R   LL +  P   L+
Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|154247983|ref|YP_001418941.1| ABC transporter related [Xanthobacter autotrophicus Py2]
 gi|154162068|gb|ABS69284.1| ABC transporter related [Xanthobacter autotrophicus Py2]
          Length = 606

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 76/327 (23%), Positives = 141/327 (43%), Gaps = 30/327 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L LL  V    + + +  T   +Y   + +  LIY + A GL+++VG  GL+SL     +
Sbjct: 12  LTLLGFVALAAILVIVPLTSGNEYELRLFMLFLIYGIIAVGLNVLVGLTGLVSLGQAGLF 71

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+G+Y+  I+ +R G  +     ++A+++   G+++  P+++ RG YLA+ T+    I +
Sbjct: 72  ALGSYTGAIVATRLGFDMISSSLIAALVAAGFGVLLAYPTVRVRGVYLAVVTIAFGLIVE 131

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           N+ I+W+ +T G  G+         G  +                    Y VL  + FL+
Sbjct: 132 NVAIEWQSLTGGTTGLTSIPSPNAFGVRLSG---------------YAFYGVLAVLLFLA 176

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    L+ +    A   +  ++ A  +L       +  AF  ++   G+AG F+A    
Sbjct: 177 TAAAHNLKVSRYGRAMLAVSQSEIAARALGVDATAMRTLAFVAAAVTAGLAGTFYAFLNS 236

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ISPD+F FS+++  + +VILGG  S         IL  + E                  
Sbjct: 237 YISPDIFTFSDSVRFLLMVILGGAASTFGPVLGAYILTYLPEYLQ--------------- 281

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
            F +         L +V+ +    ++ 
Sbjct: 282 DFAVWQKFAYGALLLVVMFVMPRGIMG 308


>gi|327395600|dbj|BAK13022.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Pantoea ananatis AJ13355]
          Length = 423

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 163/342 (47%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+  ++    +      +    +    LIY+M   GL++VVG  GLL L     YAIGA
Sbjct: 90  LVMALMIAAAVIWPFLVSRGSVDIATLTLIYIMLGLGLNVVVGISGLLVLGYGGFYAIGA 149

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YG   W  +P++ +++ A G+++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 150 YTFALLNHYYGFGFWQSLPLAGLVAAAFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 209

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +  F G             +    F          IF+Y V L 
Sbjct: 210 NNTAITGGPNGIAQIPKPTFFGLEFGRRVSEGGWGTFHEVFGMKYDPSDRVIFLYLVALL 269

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 270 LVVLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 329

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y     
Sbjct: 330 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY----- 384

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        ++   + L+++ R   LL ++ P   L +
Sbjct: 385 ----------SMLVLGGLMVLMMIWRPQGLLPMKRPHLKLRQ 416


>gi|254251638|ref|ZP_04944956.1| inner-membrane translocator [Burkholderia dolosa AUO158]
 gi|124894247|gb|EAY68127.1| inner-membrane translocator [Burkholderia dolosa AUO158]
          Length = 389

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 83/345 (24%), Positives = 152/345 (44%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   +     ++    +       Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  VTIGILTAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                 +   +++P++  ++   G+++G P+L+ 
Sbjct: 83  YAVGAYTAALLSSPHLTSQFEWIAALAPNGLHVPFLIIVPIAMALAATFGILLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +     +L +        +
Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHVGGFNLSQTHTLFGFQL 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA F A +  +SP+ F F E+I+V++ V+LGGM  +  +     +L    E 
Sbjct: 263 GASFGGLSGAMFGAFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAVFPEF 322

Query: 298 CCGMNFYYFNSLLKFD-CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    ++L   D     +    L  +A+ +++L RS  L  
Sbjct: 323 LRSTMSPLQHALFGHDVVDTEVIRQALYGLAMVIIMLYRSEGLWP 367


>gi|330818057|ref|YP_004361762.1| Inner-membrane translocator [Burkholderia gladioli BSR3]
 gi|327370450|gb|AEA61806.1| Inner-membrane translocator [Burkholderia gladioli BSR3]
          Length = 390

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 86/345 (24%), Positives = 151/345 (43%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   + +   +    F+       Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  LAIGVVLAILVAAAPFVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY   +L S +                    W+++P +  ++   G+++G P+L+ 
Sbjct: 83  YAVGAYVAALLTSPHLTTQFAWIAAMFPNGLHTPYWIVVPCAMALAALAGVLLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  L     +L +        +
Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPQGITGVAPLHIGGFNLSQSHTLFGFTI 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YYV +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 TSVYLYYYVFVICSLLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++G+ F A +  +SP+ F F E+I+V++ V+LGGM  +  +     +L    E+
Sbjct: 263 GASFGGLSGSMFGAFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAVFPEV 322

Query: 298 CCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    ++L         +    L  +A+ L++L RS  L  
Sbjct: 323 LRSTMGPLQHALFGHEIIDTEVIRQALYGLAMVLIMLYRSEGLWP 367


>gi|303246755|ref|ZP_07333032.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
 gi|302491772|gb|EFL51652.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
          Length = 407

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 89/323 (27%), Positives = 155/323 (47%), Gaps = 17/323 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +  PL  F       + +Y   + I +L+Y+    GL++VVG  GLL L  +  Y +GA
Sbjct: 90  MLYLPLAAFALAYPILTNRYAQDVAINVLVYICLGLGLNVVVGLCGLLDLGYIAFYGVGA 149

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   Y +  W+ +P+ A+ +   G I+G P+L+ RGDYLAI TL   EI + ++ 
Sbjct: 150 YTYALLSVHYAVPFWVCLPICALFAAMAGCIIGYPTLRMRGDYLAIVTLGFGEIVRIVIN 209

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  +T G  G+           +       F F   ++    ++YY++L +   +   +
Sbjct: 210 NWMDLTGGPNGVLGIKAPGIYVPSFADGS--FSFEHLYLRKLEYLYYIILALAVFTIIAV 267

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +  + I  A+  IR+++ A   +       KL A+A+ + F G+AGAFFAA    +SP
Sbjct: 268 YRINFSRIGRAFEAIREDETAAELMGVDTFRFKLLAYALGAVFGGLAGAFFAARMRFVSP 327

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F F E+ +V+++V+LGGM S+  +      L+ + E+  G   Y              
Sbjct: 328 ESFTFIESAMVLAMVVLGGMGSIPGVILGALALVALPEVFRGFELY-------------- 373

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
                   A+ L++++R   L  
Sbjct: 374 -RMLAFGGAMALMMIVRPAGLWP 395


>gi|291619271|ref|YP_003522013.1| LivM [Pantoea ananatis LMG 20103]
 gi|291154301|gb|ADD78885.1| LivM [Pantoea ananatis LMG 20103]
          Length = 423

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 163/342 (47%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+  ++    +      +    +    LIY+M   GL++VVG  GLL L     YAIGA
Sbjct: 90  LVMALMIAAAVIWPFLVSRGSVDIATLTLIYIMLGLGLNVVVGLSGLLVLGYGGFYAIGA 149

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YG   W  +P++ +++ A G+++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 150 YTFALLNHYYGFGFWQSLPLAGLVAAAFGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 209

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +  F G             +    F          IF+Y V L 
Sbjct: 210 NNTAITGGPNGIAQIPKPTFFGLEFGRRVSEGGWGTFHEVFGMKYDPSDRVIFLYLVALL 269

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 270 LVVLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 329

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y     
Sbjct: 330 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY----- 384

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        ++   + L+++ R   LL ++ P   L +
Sbjct: 385 ----------SMLVLGGLMVLMMIWRPQGLLPMKRPHLKLRQ 416


>gi|171316758|ref|ZP_02905970.1| inner-membrane translocator [Burkholderia ambifaria MEX-5]
 gi|171098108|gb|EDT42923.1| inner-membrane translocator [Burkholderia ambifaria MEX-5]
          Length = 389

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 83/345 (24%), Positives = 154/345 (44%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +     ++    +  +    Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  VIIGILTAAFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                 +   L++P++  ++   G+++G P+L+ 
Sbjct: 83  YAVGAYTAALLSSPHLTSQFEWIAALAPNGLHIPFLLIVPIAMALAATFGILLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +     +L +        +
Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHVGGFNLSQTHTLFGFQL 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYMYYYLFVLCSLLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA F + +  +SP+ F F E+I+V++ V+LGGM  +  +     +L    E 
Sbjct: 263 GASFGGLSGAMFGSFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPEF 322

Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                    ++L   D     +    L  +A+ +++L RS  L  
Sbjct: 323 LRSTMSPLQHALFGHDIVDTEVIRQALYGLAMVIIMLYRSEGLWP 367


>gi|311107304|ref|YP_003980157.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310761993|gb|ADP17442.1| inner-membrane translocator 43 [Achromobacter xylosoxidans A8]
          Length = 362

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 94/339 (27%), Positives = 157/339 (46%), Gaps = 4/339 (1%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  +A++  +L  L      + +    +    L+YVM + GL+IVVG  GLL L  +  Y
Sbjct: 15  LIGIALIGVVLAVLPFVIGMAGQSWVRILNFALLYVMLSLGLNIVVGFAGLLDLGYIAFY 74

Query: 75  AIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           A+GAY++ +L S +    L  W ++P++  ++   G+++G P+LK RGDYLAI TL   E
Sbjct: 75  AVGAYTWALLASPHFGLHLPFWAILPIALAVACLFGVLLGAPTLKLRGDYLAIVTLGFGE 134

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +  L       N   G    +R+        +  R        V      YY+LL + 
Sbjct: 135 IIRIFLNNLNAPVNITNGPQGINRIDTFKVGEFAFGRTESLLGLRVTGPEKYYYLLLAIT 194

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +   + + L+ + I  AW  IR+++ A  ++       KL AFA+ ++F G+AGA FA+
Sbjct: 195 LIIVVVCVRLQNSRIGRAWEAIREDEIAAKAMGINTRNIKLLAFAMGASFGGVAGALFAS 254

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  +SP+ F   E+I ++ +V+LGGM  +  +     IL  + E    +     + L  
Sbjct: 255 MQGFVSPESFSLMESISILCMVVLGGMGHIPGVILGALILAALPEFLRAVVEPVQHMLFG 314

Query: 312 -FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
                       L  +A+  V+L R   L         L
Sbjct: 315 AVVLDPEGIRMLLFGLAMVCVMLFRPAGLWPSAVRKREL 353


>gi|317154162|ref|YP_004122210.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2]
 gi|316944413|gb|ADU63464.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2]
          Length = 430

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 97/327 (29%), Positives = 156/327 (47%), Gaps = 26/327 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
            A +  + L   L       Y  ++ I  L+Y++   GL+IVVG  GLL L  V  YA+G
Sbjct: 114 FAALGVVALLAGLYPQVFDLYQTNIMISCLVYIVLGLGLNIVVGLAGLLDLGYVAFYAVG 173

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+Y +    + +  W ++P+ A +    G+I+G P L+ RGDYLAI TL   EI + +L
Sbjct: 174 AYAYALCNMHWDIGFWFMLPIGAALGTILGVILGFPVLRLRGDYLAIVTLGFGEIIRLVL 233

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
             W  +T G +GI    R  F                +     I+MYY+++G+  L+   
Sbjct: 234 ENWGDVTMGPSGISNISRPGFF-----------GMKMTISDSTIYMYYIMIGLLILTIFS 282

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L+ + I  AW  +R+++ A  ++    +  KL AFA+ + + GMAG  FAA    I+
Sbjct: 283 VNRLQNSRIGRAWLALREDEIACQAMGIDKVKTKLLAFALGATWAGMAGVVFAAKTTFIN 342

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F F E+ +++SIV++GGM S+  +     ILI V E       +             
Sbjct: 343 PASFTFWESAMILSIVVIGGMGSIRGVIAGAIILILVPEYLREFAEF------------- 389

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRT 344
                L    + LV++ R   L+  + 
Sbjct: 390 --RMLLFGAIMVLVMVFRPQGLISAKR 414


>gi|161523978|ref|YP_001578990.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
 gi|189351260|ref|YP_001946888.1| branched-chain amino acid transporter permease [Burkholderia
           multivorans ATCC 17616]
 gi|221199275|ref|ZP_03572319.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia multivorans
           CGD2M]
 gi|221205823|ref|ZP_03578838.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia multivorans CGD2]
 gi|221211495|ref|ZP_03584474.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia multivorans CGD1]
 gi|160341407|gb|ABX14493.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
 gi|189335282|dbj|BAG44352.1| branched-chain amino acid transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|221168856|gb|EEE01324.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia multivorans CGD1]
 gi|221174661|gb|EEE07093.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia multivorans CGD2]
 gi|221180560|gb|EEE12963.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia multivorans
           CGD2M]
          Length = 389

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 83/345 (24%), Positives = 152/345 (44%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   +     ++    +       Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  VTIGILTAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                 +   +++P++  ++   G+++G P+L+ 
Sbjct: 83  YAVGAYTAALLSSPHLTSQFEWIAALAPNGLHVPFLIIVPIAMALAATFGVLLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +     +L +        +
Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHVGGFNLSQTHTLFGFQL 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA F A +  +SP+ F F E+I+V++ V+LGGM  +  +     +L    E 
Sbjct: 263 GASFGGLSGAMFGAFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAVFPEF 322

Query: 298 CCGMNFYYFNSLLKFD-CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    ++L   D     +    L  +A+ +++L RS  L  
Sbjct: 323 LRSTMSPLQHALFGHDVVDTEVIRQALYGLAMVIIMLYRSEGLWP 367


>gi|239815097|ref|YP_002944007.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239801674|gb|ACS18741.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 398

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 90/358 (25%), Positives = 167/358 (46%), Gaps = 17/358 (4%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K  K L L  +    +L L +           +    L+YVM + GL+IVVG  GLL L 
Sbjct: 2   KNSKNLALYVLGVVAVLALPIFLQSQGNAWVRIADIALLYVMLSLGLNIVVGYAGLLDLG 61

Query: 70  CVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLP 113
            V  +A+GAY + ++GS +                  S+ +++P++ +++G  G+++G P
Sbjct: 62  YVAFFAVGAYLFALMGSSHLSETFPWFKAMFPNGLHTSLLIVVPLALVVAGVLGVMLGAP 121

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
           +LK RGDYLAI TL   EI +  L       N   G      +  +      L + ++F 
Sbjct: 122 TLKLRGDYLAIVTLGFGEIIRVFLNNLDQPINITNGPKGITAIDSIKFWGLDLGKAWKFD 181

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
              +      YY+ L +   +  I   L+ + I  AW  IR+++ A  ++       KL 
Sbjct: 182 GFSISSVTLYYYLFLALVVATIIISHRLQMSRIGRAWMAIREDEIAAKAMGINTRNMKLL 241

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
           AF + ++F G++GA FAA +  +SP+ F   E+++++++V+LGG+  L  +     +L  
Sbjct: 242 AFGMGASFGGVSGAMFAAFQGFVSPESFSLMESVMIVAMVVLGGIGHLPGVILGAVLLAA 301

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           + E+   +      ++       ++     + +A+ +++L+R   L         L+R
Sbjct: 302 LPEVLRYVAGP-LQAMTDGRLDASILRQLFIALAMIIIMLVRPRGLWPSPEHGKTLQR 358


>gi|89093322|ref|ZP_01166271.1| high-affinity branched-chain amino acid transport protein
           [Oceanospirillum sp. MED92]
 gi|89082301|gb|EAR61524.1| high-affinity branched-chain amino acid transport protein
           [Oceanospirillum sp. MED92]
          Length = 418

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 106/341 (31%), Positives = 161/341 (47%), Gaps = 24/341 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++ + +      +    +    LIY+M   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 93  LLALLIVGMLVWPFMVSRGSVDLATLALIYIMLGLGLNIVVGLAGLLDLGFVAFYAVGAY 152

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L   +G+S W  +P+SA ++   G I+G P L+ RGDYLAI TL   EI + +L  
Sbjct: 153 TYALLSQYFGMSFWACLPISAGLAALFGFILGFPVLRLRGDYLAIVTLGFGEIIRILLNN 212

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRS---------LIRFFRFPSSFVIYEIFMYYVLLGM 190
           W  +T G  GI   D+    G                 FF    S     IF+Y + + +
Sbjct: 213 WTAVTGGPNGISGIDKPTLFGLEFSRRAKEEDTVLFHEFFGIDYSSSYKVIFLYLIAVIL 272

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 +I  L R  +  AW  +R+++ A  SL       KLSAF + +   G AGAFFA
Sbjct: 273 TIFVVYVINRLMRMPVGRAWEALREDEIACRSLGLNRTVIKLSAFTLGATTAGFAGAFFA 332

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           A +  ISP+ F F E+ I+++IV+LGGM S   +  A  I+  + EL    + Y      
Sbjct: 333 ARQGFISPESFIFIESAIILAIVVLGGMGSQVGVILAAIIMTILPELAREFSEY------ 386

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                       L    + +++  R   L+ ++ P   L R
Sbjct: 387 ---------RMLLFGFLMVIMMRWRPQGLVPMKRPHLELNR 418


>gi|33597167|ref|NP_884810.1| putative ABC transport protein, ATP-binding component [Bordetella
           parapertussis 12822]
 gi|33573594|emb|CAE37876.1| putative ABC transport protein, ATP-binding component [Bordetella
           parapertussis]
          Length = 362

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 96/339 (28%), Positives = 157/339 (46%), Gaps = 4/339 (1%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  +A++  +L  L      + +    +    L+YVM A GL+IVVG  GLL L  +  Y
Sbjct: 15  LVGIALIGIVLAVLPFVLGMAGQSWVRILNFALLYVMLALGLNIVVGFAGLLDLGYIAFY 74

Query: 75  AIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           A+GAY++ +L S +    L  W ++P++  ++   G+++G P+LK RGDYLAI TL   E
Sbjct: 75  AVGAYTWALLASPHFGLHLPFWAILPMALGVACVFGVLLGAPTLKLRGDYLAIVTLGFGE 134

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +  L       N   G    +R+        +  R               YY+L+ + 
Sbjct: 135 IIRIFLNNLNAPVNITNGPQGINRIDAFKVGDFAFGRTETILGIRFTGPEKYYYLLVLLT 194

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L   + + L+ + I  AW  IR+++ A  ++       KL AFA+ ++F G+AGA FAA
Sbjct: 195 LLIIVVCVRLQNSRIGRAWEAIREDEIAAKAMGINSRNIKLLAFAMGASFGGVAGALFAA 254

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  +SP+ F  +E+I V+ +V+LGGM  +  +     IL  + E    +     + L  
Sbjct: 255 MQGFVSPESFSLTESISVLCMVVLGGMGHIPGVILGAVILAVLPEFLRAVVEPAQHLLFG 314

Query: 312 -FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
                       L  +A+  V+L R   L         L
Sbjct: 315 AVVLDPEGIRMLLFGLAMVCVMLFRPAGLWPSAVRKREL 353


>gi|325527363|gb|EGD04720.1| inner-membrane translocator [Burkholderia sp. TJI49]
          Length = 389

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 84/345 (24%), Positives = 154/345 (44%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +     ++    +  +    Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  VVIGILTAAFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                 +   +++P++  ++   G+++G P+L+ 
Sbjct: 83  YAVGAYTAALLSSPHLSSQFEWIAALAPNGLHVPFLIIVPIAMALAATFGILLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +     SL +        +
Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHVGGFSLAQTHTIFGFQL 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYLYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA F A +  +SP+ F F E+I+V++ V+LGGM  +  +     +L    E 
Sbjct: 263 GASFGGLSGAMFGAFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPEF 322

Query: 298 CCGMNFYYFNSLLKFD-CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    ++L   D     +    L  +A+ +++L RS  L  
Sbjct: 323 LRSTMSPLQHALFGHDVVDTEVIRQALYGLAMVVIMLYRSEGLWP 367


>gi|157368479|ref|YP_001476468.1| leucine/isoleucine/valine transporter permease subunit [Serratia
           proteamaculans 568]
 gi|157320243|gb|ABV39340.1| inner-membrane translocator [Serratia proteamaculans 568]
          Length = 427

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 104/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   +++          +    +    LIYVM   GL++VVG  GLL L     YAIGA
Sbjct: 90  LLAAAIIIAAVAWPFLVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 149

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   YGL  W  +P++ +++   G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 150 YTYALLNHYYGLGFWESLPLAGIVTAIFGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 209

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +  F G             +   FF          +F+Y V L 
Sbjct: 210 NNTEITGGPNGISQIPKPTFFGLEFNRSVRDGGWDTFHNFFGLKYDPSDRIVFLYLVALL 269

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +I  L R  +  AW  +R+++ A  SL       KL+AF +S+AF G AG  F
Sbjct: 270 LVVLTLFVINRLLRMPLGRAWEALREDEIACRSLGLNPTKIKLTAFTISAAFAGFAGTLF 329

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F E+  V++IV+LGGM S   +  A  +L+   E+   +N Y     
Sbjct: 330 AARQGFVSPESFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSREMMRDLNEY----- 384

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        L+   + L+++ R   LL ++ P   L+
Sbjct: 385 ----------SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 415


>gi|209514920|ref|ZP_03263789.1| ABC transporter related [Burkholderia sp. H160]
 gi|209504546|gb|EEA04533.1| ABC transporter related [Burkholderia sp. H160]
          Length = 602

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 78/306 (25%), Positives = 137/306 (44%), Gaps = 30/306 (9%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y+  +G+ I+ Y +   GL+IVVG  GLL L     +AIGAY+  +L +    S W  
Sbjct: 30  SNYVVDVGLTIVTYSILGLGLNIVVGYAGLLDLGYAAFFAIGAYTTALLETLLHFSFWET 89

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +P S   +   G+++G P+L+ R DYLAI TL   EI + +      IT G  GI+    
Sbjct: 90  LPFSLTFTAVSGIVIGYPTLRLRSDYLAIVTLGFGEITRIVATNL-DITGGPNGIFGIAS 148

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
               G  + S                 +Y + +    L     + L ++ +  AW +IR+
Sbjct: 149 PSLFGFEISS--------------PQALYELGMAFLVLVLVFAVRLGQSRLGRAWTSIRE 194

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  ++    +  KL A+ + +   G+ G+ FAA    I P  F + +++ ++ +V+L
Sbjct: 195 DEAAAEAVGVPTLRVKLLAYVMGALIGGLGGSLFAARFGTIDPTGFTYLQSVTILIVVVL 254

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  S+  +     I+ G+ E+   +N               +       I L +++L+R
Sbjct: 255 GGRGSIPGVVLGAIIVAGLPEILRFLN---------------LWRIFAFAIGLVILMLLR 299

Query: 336 SHSLLR 341
              L  
Sbjct: 300 PQGLWP 305


>gi|70728678|ref|YP_258427.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           fluorescens Pf-5]
 gi|68342977|gb|AAY90583.1| high-affinity branched-chain amino acid transport protein
           [Pseudomonas fluorescens Pf-5]
          Length = 418

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 107/340 (31%), Positives = 171/340 (50%), Gaps = 23/340 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L+L   +      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 94  IILALILGALVWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           SY +L   +GLS W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI + +L  
Sbjct: 154 SYALLSHYFGLSFWICLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLLRN 213

Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
              +T G  GI   ++  F G T         ++   FF    + +   IF+Y V L + 
Sbjct: 214 MTDLTGGPNGISNIEKPTFFGLTFERKAAEGMQTFHEFFGLQYNSINKVIFLYLVALLLA 273

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
             +  +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG+FFAA
Sbjct: 274 LAALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAA 333

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  ++P+ F F E+ I+++IV+LGGM S   +  A  ++I + E+    + Y       
Sbjct: 334 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPEMMREFSEY------- 386

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                      +    + L+++ R   LL ++ P   L +
Sbjct: 387 --------RMLMFGAMMVLMMIWRPQGLLPMQRPHMELRK 418


>gi|110807284|ref|YP_690804.1| leucine/isoleucine/valine transporter permease subunit [Shigella
           flexneri 5 str. 8401]
 gi|110616832|gb|ABF05499.1| high-affinity branched-chain amino acid transport [Shigella
           flexneri 5 str. 8401]
          Length = 402

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    + I  +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 80  WPFMVSRGTVDIAILTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 139

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 140 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 199

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 200 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 259

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 260 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 319

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 320 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 364

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 365 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 393


>gi|229588874|ref|YP_002870993.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           fluorescens SBW25]
 gi|229360740|emb|CAY47598.1| high-affinity branched-chain amino acid ABC transport system,
           permease [Pseudomonas fluorescens SBW25]
          Length = 417

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 103/340 (30%), Positives = 165/340 (48%), Gaps = 23/340 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +      +    +   ILIYV+   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 93  IIIGLIVAALIWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAY 152

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L    G S W+ +P++ M +   G ++G P L+ RGDYLAI TL   EI +  L  
Sbjct: 153 TYALLSHYLGWSFWICLPLAGMAAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 212

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR--------SLIRFFRFPSSFVIYEIFMYYVLLGMC 191
              IT G  GI    +  F G +          +   +F    + V   +F+Y V L + 
Sbjct: 213 LTDITGGPNGISSIPKPTFFGLSFDRTAAEGMQTFHEYFGIDYNPVSKVVFLYLVALLLA 272

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
             +  +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG+FFAA
Sbjct: 273 LAALFVINRLLRMPIGRAWEALREDEIACRALGLNPTIIKLSAFTLGAAFAGFAGSFFAA 332

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  ++P+ F F E+ I+++IV+LGGM S   +  A  ++I + E+    + Y       
Sbjct: 333 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPEMMREFSEY------- 385

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                      +    + L+++ R   LL ++ P   L +
Sbjct: 386 --------RMLMFGAMMVLMMIWRPQGLLPMQRPHMELRK 417


>gi|170693587|ref|ZP_02884745.1| inner-membrane translocator [Burkholderia graminis C4D1M]
 gi|170141369|gb|EDT09539.1| inner-membrane translocator [Burkholderia graminis C4D1M]
          Length = 389

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 83/345 (24%), Positives = 150/345 (43%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   +     ++    +  T    Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  LTVGIITAVLVIAAPMIIGTAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                 +   +++P +  ++   G+++G P+L+ 
Sbjct: 83  YAVGAYTAALLSSPHLSSQFEWIAHLAPNGLHVPFLIIVPCAMGVAALFGVLLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  L       N   G      +  +     SL +         
Sbjct: 143 RGDYLAIVTLGFGEIVRIFLNNLDRPVNITNGPKGITAIAPVHLGDFSLSQSHSLFGFQF 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYSYYYLFVLAALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA F A +  +SP+ F   E+I+V++ V+LGGM  +  +     +L  + E 
Sbjct: 263 GASFGGLSGAMFGAFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLPEF 322

Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                    + +   +     +    +  +A+ L++L RS  L  
Sbjct: 323 LRSTMGPLQHMIFGHEIVDTEVIRQLVYALAMVLIMLYRSEGLWP 367


>gi|134292088|ref|YP_001115824.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia vietnamiensis G4]
 gi|134135245|gb|ABO56359.1| L-isoleucine ABC transporter membrane protein / L-leucine ABC
           transporter membrane protein / L-valine ABC transporter
           membrane protein [Burkholderia vietnamiensis G4]
          Length = 423

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 101/342 (29%), Positives = 159/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+++ LL    +      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 97  AIIWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GLS W  +P++A+ S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 157 YTYAMLNQYFGLSFWECLPIAALASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 217 NLTDLTGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLIALA 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + +AF G+ GAFF
Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423


>gi|260599753|ref|YP_003212324.1| leucine/isoleucine/valine transporter permease subunit [Cronobacter
           turicensis z3032]
 gi|260218930|emb|CBA34285.1| High-affinity branched-chain amino acid transport system permease
           protein livM [Cronobacter turicensis z3032]
          Length = 426

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IYV+   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYVILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          I++Y V L +   S  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGVKYDPSDRVIWLYLVALLLVVFSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL       KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL   +N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LVLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|170697683|ref|ZP_02888771.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
 gi|170137431|gb|EDT05671.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
          Length = 389

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 83/345 (24%), Positives = 154/345 (44%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +     ++    +  +    Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  VIIGILTAVFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                 +   L++P++  ++   G+++G P+L+ 
Sbjct: 83  YAVGAYTAALLSSPHLTSQFEWIAALAPNGLHIPFLLIVPIAMALAATFGILLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +     +L +        +
Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHVGGFNLSQTHTLFGFQL 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYMYYYLFVLCSLLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA F + +  +SP+ F F E+I+V++ V+LGGM  +  +     +L    E 
Sbjct: 263 GASFGGLSGAMFGSFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPEF 322

Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                    ++L   D     +    L  +A+ +++L RS  L  
Sbjct: 323 LRSTMSPLQHALFGHDIVDTEVIRQALYGLAMVIIMLYRSEGLWP 367


>gi|91976256|ref|YP_568915.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91682712|gb|ABE39014.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 444

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 117/339 (34%), Positives = 182/339 (53%), Gaps = 19/339 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            +A V  +  FL       Q+YI  +GI +L YVM  WGL+IVVG  GLL L  V  YA+
Sbjct: 107 AVAPVLLIFTFLVPVIFYDQRYILDLGILVLTYVMLGWGLNIVVGLAGLLDLGYVAFYAV 166

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAYSY +L + +GLS W+ +P++ +++   G+++G P L+ RGDYLAI TL   EI + +
Sbjct: 167 GAYSYALLATNFGLSFWVCLPLAGILAAFWGVLLGFPVLRLRGDYLAIVTLAFGEIIRLV 226

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           +I W+ +T G  G+    R    G  +      L      P S     +F++Y++L +  
Sbjct: 227 IINWQSLTGGPNGVSGIPRPTLFGIPLVPGENGLAALLGIPFSPSQRLVFLFYLILALAL 286

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           ++    + LRR  I  AW  +R+++ A  +L       KL+AFA  + F G AGAFFA  
Sbjct: 287 VTNWATIRLRRLPIGRAWEALREDEVACRALGINTTTTKLTAFATGAMFGGFAGAFFATR 346

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ISP+ F F E+ +V++IV+LGGM S   +A A   LIG  EL  G++ +        
Sbjct: 347 QGFISPESFTFQESALVLAIVVLGGMGSQLGVALAALTLIGGFELFRGLDQF-------- 398

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                     +  +++  +++ R   L+  R P+ +LER
Sbjct: 399 -------RMLVFGLSMVFLMVWRPRGLIGHRAPTVYLER 430


>gi|115352594|ref|YP_774433.1| inner-membrane translocator [Burkholderia ambifaria AMMD]
 gi|115282582|gb|ABI88099.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia ambifaria AMMD]
          Length = 389

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 84/345 (24%), Positives = 154/345 (44%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  L     ++    +  +    Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  VIIGLLTAVFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                 +   L++P++  ++   G+++G P+L+ 
Sbjct: 83  YAVGAYTAALLSSPHLTSQFEWIAALAPNGLHIPFLLIVPIAMALAATFGILLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +     +L +        +
Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHVAGFNLSQTHSLFGFQL 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYMYYYLFVLCSLLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA F + +  +SP+ F F E+I+V++ V+LGGM  +  +     +L    E 
Sbjct: 263 GASFGGLSGAMFGSFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPEF 322

Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                    ++L   D     +    L  +A+ +++L RS  L  
Sbjct: 323 LRSTMSPLQHALFGHDIVDTEVIRQALYGLAMVIIMLYRSEGLWP 367


>gi|323527110|ref|YP_004229263.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
 gi|323384112|gb|ADX56203.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
          Length = 389

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 84/345 (24%), Positives = 150/345 (43%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   +     ++    +  T    Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  LTVGIITAVFVIAAPMIIGTAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                 +   +++P +  I+   G+++G P+L+ 
Sbjct: 83  YAVGAYTAALLSSPHLSSQFEWIAQLAPNGLHVPFLIIVPCAMAIAALFGVLLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  L       N   G      +  +     SL +         
Sbjct: 143 RGDYLAIVTLGFGEIVRIFLNNLDRPVNITNGPKGITAIAPVHVGDFSLSQTHSLFGLQF 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYSYYYLFVLAALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA F A +  +SP+ F   E+I+V++ V+LGGM  +  +     +L  + E 
Sbjct: 263 GASFGGLSGAMFGAFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLPEF 322

Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                    + +   +     +    +  +A+ L++L RS  L  
Sbjct: 323 LRSTMGPLQHMIFGHEIVDTEVIRQLVYALAMVLIMLYRSEGLWP 367


>gi|172061456|ref|YP_001809108.1| inner-membrane translocator [Burkholderia ambifaria MC40-6]
 gi|171993973|gb|ACB64892.1| inner-membrane translocator [Burkholderia ambifaria MC40-6]
          Length = 389

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 84/345 (24%), Positives = 154/345 (44%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +     ++    +  +    Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  VIIGILTAVFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                 +   L++P++  ++   G+++G P+L+ 
Sbjct: 83  YAVGAYTAALLSSPHLTSQFEWIAALAPNGLHIPFLLIVPIAMALAATFGILLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +     +L +        +
Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHVGGFNLSQTHTLFGFQL 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    L   I   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYMYYYLFVLCSLLVIWICTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA F + +  +SP+ F F E+I+V++ V+LGGM  +  +     +L    E 
Sbjct: 263 GASFGGLSGAMFGSFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPEF 322

Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                    ++L   D     +    L  +A+ +++L RS  L  
Sbjct: 323 LRSTMSPLQHALFGHDIVDTEVIRQALYGLAMVIIMLYRSEGLWP 367


>gi|295097053|emb|CBK86143.1| L-leucine ABC transporter membrane protein/L-isoleucine ABC
           transporter membrane protein/L-valine ABC transporter
           membrane protein [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 425

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 102/330 (30%), Positives = 158/330 (47%), Gaps = 24/330 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IYV+   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYVILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+    +T G  GI
Sbjct: 163 GFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEVTGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          I++Y V L +  ++  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGIKYDPSDRVIWLYLVALLLVVITLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL       KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            ++   + L+++ R   LL +  P   L+R
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLKR 417


>gi|307730747|ref|YP_003907971.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|307585282|gb|ADN58680.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
          Length = 389

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 83/345 (24%), Positives = 149/345 (43%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   +     ++    +  +    Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  LTVGIITAVFVIAAPMIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                 +   +++P +  I+   G+++G P+L+ 
Sbjct: 83  YAVGAYTAALLSSPHLSTQFEWIAQLAPNGLHVPFLIIVPCAMAIAALFGVLLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  L       N   G      +  +     SL +         
Sbjct: 143 RGDYLAIVTLGFGEIVRIFLNNLDRPVNITNGPKGITAIAPVHLGDFSLSQTHSLFGIQF 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYSYYYLFVLAALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA F A +  +SP+ F   E+I+V++ V+LGGM  +  +     +L  + E 
Sbjct: 263 GASFGGLSGAMFGAFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLPEF 322

Query: 298 CCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    + +         +    +  +A+ L++L RS  L  
Sbjct: 323 LRSTMGPLQHMIFGHEVVDTEVIRQLVYALAMVLIMLYRSEGLWP 367


>gi|91784957|ref|YP_560163.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91688911|gb|ABE32111.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 389

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 80/347 (23%), Positives = 149/347 (42%), Gaps = 17/347 (4%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             ++  +     ++    +       Y   +    ++YVM A GL++VVG  GLL L  +
Sbjct: 21  RTLMVGIITAIFVIAAPMIIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYI 80

Query: 72  IAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSL 115
             YA+GAY   +L S +                 +   +++P +  ++   G+++G P+L
Sbjct: 81  AFYAVGAYVAALLSSPHLSTQFEWIAHLAPNGLHVPFLIIVPCAMALAALFGVLLGAPTL 140

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
           + RGDYLAI TL   EI +  +       N   G      +  +     SL +       
Sbjct: 141 RLRGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITAIDPVHFGDFSLAQTHSLFGL 200

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                   YY+ +    +   +   L+ + I  AW  IR+++ A  ++       KL AF
Sbjct: 201 QFPSVYSYYYLFVIAALVVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAF 260

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
           A+ ++F G++GA F + +  +SP+ F   E+I+V++ V+LGGM  +  +     +L  + 
Sbjct: 261 AMGASFGGLSGAMFGSFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLP 320

Query: 296 ELCCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
           E          N +   +     +    +  +A+ L++L RS  L  
Sbjct: 321 EFLRSTMGPLQNMIFGHEIVDTEVIRQLVYALAMVLIMLYRSEGLWP 367


>gi|239814296|ref|YP_002943206.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239800873|gb|ACS17940.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 399

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 91/358 (25%), Positives = 166/358 (46%), Gaps = 17/358 (4%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K  K L L  +    +L L +           +    L+YVM + GL+IVVG  GLL L 
Sbjct: 2   KNSKNLALYILGVVAVLALPIFLQSQGNAWVRIADIALLYVMLSLGLNIVVGYAGLLDLG 61

Query: 70  CVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLP 113
            V  +AIGAY + ++GS +                  S+ ++IP++ +++G  G+++G P
Sbjct: 62  YVAFFAIGAYLFALMGSSHLSDTFPWFKAMFPNGLHTSLLIVIPLALVVAGMLGVLLGAP 121

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
           +LK RGDYLAI TL   EI +  L       N   G      +  +      L + ++  
Sbjct: 122 TLKLRGDYLAIVTLGFGEIIRVFLNNLDQPINITNGPKGITAIDSVKFWGLDLGKAWKLD 181

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
              +      YY+ L +   +  I   L+ + I  AW  IR+++ A  ++       KL 
Sbjct: 182 GFSISSVTLYYYLFLALVVATIIISHRLQMSRIGRAWMAIREDEIAAKAMGINTRNMKLL 241

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
           AF + ++F G++GA FAA +  +SP+ F   E+++++++V+LGG+  L  +     +L  
Sbjct: 242 AFGMGASFGGVSGAMFAAFQGFVSPESFSLMESVMIVAMVVLGGIGHLPGVILGAVLLAA 301

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           + E+   +      ++       ++     + +A+ +++L+R   L         L+R
Sbjct: 302 LPEVLRYVAGP-LQAMTDGRLDASILRQLFIALAMIIIMLVRPRGLWPSPEHGKTLQR 358


>gi|330807906|ref|YP_004352368.1| high-affinity branched amino acid ABC transporter permease
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327376014|gb|AEA67364.1| Putative high-affinity branched amino acid ABC transporter,
           permease component [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 418

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 108/340 (31%), Positives = 170/340 (50%), Gaps = 23/340 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V  L++   +      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 94  IVLGLIVVALVWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           SY +L   +GLS W+ +P++ M++   G ++G P L+ RGDYLAI TL   EI +  L  
Sbjct: 154 SYALLSHYFGLSFWICLPIAGMMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 213

Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
              IT G  GI   ++  F G T         ++   +F    + +   IF+Y V L + 
Sbjct: 214 LTDITGGPNGISNIEKPTFFGLTFERKAAEGLQTFHEYFGLEYNSINKVIFLYLVALLLA 273

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
             +  +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG+FFAA
Sbjct: 274 LAALFVINRLLRMPIGRAWEALREDEIACRALGLNPTIIKLSAFTLGAAFAGFAGSFFAA 333

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  ++P+ F F E+ I+++IV+LGGM S   +  A  ++I + E+    + Y       
Sbjct: 334 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPEMMREFSEY------- 386

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                      +    + L+++ R   LL ++ P   L +
Sbjct: 387 --------RMLMFGALMVLMMIWRPQGLLPMQRPHMELRK 418


>gi|209884619|ref|YP_002288476.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivM (LIV-I protein M) [Oligotropha
           carboxidovorans OM5]
 gi|209872815|gb|ACI92611.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivM (LIV-I protein M) [Oligotropha
           carboxidovorans OM5]
          Length = 442

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 111/339 (32%), Positives = 176/339 (51%), Gaps = 19/339 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L+     +   L      +Q+Y+  + I +L Y+M  WGL+IVVG  GLL L  V  YA+
Sbjct: 106 LVVPALLIFACLAPVIFYNQRYMLDLSILVLTYIMLGWGLNIVVGLAGLLDLGYVAFYAV 165

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAYSY +L + +GLS W+ +P++ +++   G+++G P L+ RGDYLAI TL   EI + +
Sbjct: 166 GAYSYALLSTTFGLSFWVCLPLAGILAAFWGILLGFPVLRLRGDYLAIVTLAFGEIIRLV 225

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF----FRFPSSFVIYEIFMYYVLLGMCF 192
           L+ W+ +T G  GI    R    G  +             P S     + ++Y++L +  
Sbjct: 226 LLNWQHVTGGPNGISGIPRPSLFGIPLTPGPNGLAAQLGIPFSPTHRLVLLFYIILALAL 285

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L+  + + LRR  I  AW  +R+++ A  +L       KL+AFA+ + F G AGAFFA  
Sbjct: 286 LTNWVTIRLRRLPIGRAWEALREDEIACRALGINTTTTKLTAFAIGAMFGGFAGAFFATR 345

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ISP+ F F E+ +V++IV+LGGM S   +  ++  LIG  EL  G   +        
Sbjct: 346 QGFISPESFTFQESALVLAIVVLGGMGSQLGVVLSSLALIGGFELFRGFEQF-------- 397

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                         A+ L+++ R   L+  R P+ FL +
Sbjct: 398 -------RMLAFGGAMVLLMIWRPRGLIAHRDPTLFLGK 429


>gi|146339849|ref|YP_001204897.1| high-affinity branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. ORS278]
 gi|146192655|emb|CAL76660.1| high-affinity branched-chain amino acid ABC transporter (permease
           protein) [Bradyrhizobium sp. ORS278]
          Length = 446

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 120/338 (35%), Positives = 183/338 (54%), Gaps = 19/338 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           LA    +  FL      +Q+YI  +GI +L YVM  WGL++VVG  GLL L  V  YA+G
Sbjct: 110 LAPALLIFTFLVPVIFYNQRYILDLGILVLTYVMLGWGLNVVVGLAGLLDLGYVAFYAVG 169

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYSY +L + +GLS W+ +P++ +++   G+++G P L+ RGDYLAI TL   EI + +L
Sbjct: 170 AYSYGLLSTTFGLSFWICLPLAGILAAFWGVLLGFPVLRLRGDYLAIVTLAFGEIIRLVL 229

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           I W+ +T G  G+    R    G  +      L      P S     +F++Y++L +  L
Sbjct: 230 INWQEVTGGPNGVSGIPRPTLFGIPLTPGEGGLASMLGIPFSPTHRIVFLFYLILALALL 289

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  + + LRR  I  AW  +R+++ A  +L   I   KL+AFA  + F G AGAFFA  +
Sbjct: 290 TNWVTIRLRRLPIGRAWEALREDEVACRALGINITTTKLTAFATGAMFGGFAGAFFATRQ 349

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             ISP+ F F E+ +V++IV+LGGM S   +A A   +IG  EL   +  Y         
Sbjct: 350 GFISPESFTFQESALVLAIVVLGGMGSQLGVALAALAMIGGFELFRSLEVY--------- 400

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                    +  +A+ LV++ R   ++  R P+ FLE+
Sbjct: 401 ------RMLVFGLAMVLVMIWRPRGIVGHRAPTVFLEK 432


>gi|268590794|ref|ZP_06125015.1| high-affinity branched-chain amino acid transport protein
           [Providencia rettgeri DSM 1131]
 gi|291313573|gb|EFE54026.1| high-affinity branched-chain amino acid transport protein
           [Providencia rettgeri DSM 1131]
          Length = 423

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 23/329 (6%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    LIYVM   GL++VVG  GLL L     YAIGAY++ +L   YG 
Sbjct: 103 WPFIVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYAGFYAIGAYTFGLLNHYYGF 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ + +   G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWESLPIAGLTAALAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
               +  F G            +   FF    S     IF+Y+V L +  L+  +I  L 
Sbjct: 223 SQLPKPTFFGLEFSRTAKDGWDTFHNFFGLDYSPGDRIIFLYFVALLLVVLTLFVINRLL 282

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R  +  AW  +R+++ A  SL  +    KL++F +S+AF G AG  FAA +  ISP+ F 
Sbjct: 283 RMPLGRAWEALREDEIACRSLGLSPTRIKLTSFTISAAFAGFAGTLFAARQGFISPESFT 342

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F E+  V++IV+LGGM S + +  A  IL+   E+   +N Y                  
Sbjct: 343 FVESAFVLAIVVLGGMGSQTSVILAAIILVVSREMMRDLNQY---------------SML 387

Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLER 351
           L+   + L+++ R   LL ++     +++
Sbjct: 388 LLGALMVLMMIWRPQGLLPMKRRQMQVKK 416


>gi|258544252|ref|ZP_05704486.1| high-affinity branched-chain amino acid transport protein
           [Cardiobacterium hominis ATCC 15826]
 gi|258520490|gb|EEV89349.1| high-affinity branched-chain amino acid transport protein
           [Cardiobacterium hominis ATCC 15826]
          Length = 408

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 108/341 (31%), Positives = 164/341 (48%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+  L++  F       +   ++    LIYVM    L+IVVG  GLL L  V  YA+GA
Sbjct: 84  VVLALLIVAAFFVPVFGSRGAVNVATLALIYVMLGLSLNIVVGYAGLLDLGHVAFYAVGA 143

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y Y IL        W  +P++A+++GA G+++G P L+ RGDYLAI TL   EI + +L 
Sbjct: 144 YCYAILAQHGVG-FWTTLPIAALLTGALGLLLGFPVLRLRGDYLAIVTLGFGEIIRILLN 202

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR--------SLIRFFRFPSSFVIYEIFMYYVLLGM 190
               +TNG  GI    +                         P S     IF+Y ++LG+
Sbjct: 203 NLDSLTNGPKGINNIPKPGLFNIVFTRKGGAGETPFHELVGIPFSTEQRGIFLYLIILGL 262

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
           C L+  +I  L R  I  AW  +R+++ A  SL       KLSAFA+ +AF G+AGAF+A
Sbjct: 263 CLLTLWVINRLLRMPIGRAWEALREDEIACRSLGVNTTGIKLSAFAIGAAFAGLAGAFYA 322

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           A +  ++PD F F E+ I+++IV+LGGM S + +  A   L  + E+    + Y      
Sbjct: 323 AFQGSVTPDSFTFWESAIMLAIVVLGGMGSQTGVILAALALTIIPEIAREFSQY------ 376

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                       +    + L+++ R   L+  + P   L  
Sbjct: 377 ---------RMIIFGAVMVLMMIWRPQGLIPAQRPKMELPE 408


>gi|148657086|ref|YP_001277291.1| inner-membrane translocator [Roseiflexus sp. RS-1]
 gi|148569196|gb|ABQ91341.1| inner-membrane translocator [Roseiflexus sp. RS-1]
          Length = 454

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 83/352 (23%), Positives = 151/352 (42%), Gaps = 19/352 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +   LL  +         +   +  +  ++   A GL++VVG  GLL L  V  +A+G
Sbjct: 78  LTLGTILLAVIMPIFGVLNPFYIDVVTKAGMFAALALGLNVVVGFAGLLDLGYVAFFAVG 137

Query: 78  AYSYVILGSR------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           AY + I  +             +G   WL + +  ++    G+++GLP L+ RGDYLAI 
Sbjct: 138 AYLWGIFSTPQISNIVPGMEPLHGSWFWLFLAIGLVVGALFGVLLGLPVLRLRGDYLAIV 197

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI-YEIFMY 184
           TL + E+ + +        N   G      +      +  + +      S V  Y+++ Y
Sbjct: 198 TLGLGEVIRVLATNLDRPINITNGSQGIKDIGRPPLFIEPVFQSLGITISRVQEYQLYFY 257

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           +++L +  L+  ++  L  + I  AW  IR+++ A  ++   ++  KL AFAV ++F G+
Sbjct: 258 FLVLIILGLTVFVVYRLNNSRIGRAWTAIREDETAAIAMGIPLVRMKLLAFAVGASFAGV 317

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            G  F+A +  I+P  F    +I ++S+VILGGM S+        I+  +          
Sbjct: 318 MGVIFSALQTFINPPTFDLLRSIGILSMVILGGMGSIPGTMLGAVIVTLLDLQLLPRIAS 377

Query: 305 YFNSL------LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              +L      +            L  + L ++++ R   LL        L 
Sbjct: 378 ELAALQRRGVPIPAWFDPAQYQRLLFGLLLIIMMIFRPEGLLPEDRRRQELH 429


>gi|38374231|gb|AAR19310.1| putative branched-chain amino acid transporter permease protein
           [symbiont bacterium of Paederus fuscipes]
          Length = 417

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 100/339 (29%), Positives = 166/339 (48%), Gaps = 24/339 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V  L+L  F+    + +    +   ILIYVM + GL+IVVG  GLL L  V  YA+GAY
Sbjct: 94  IVLALVLVAFIWPFFASRGAVDIATLILIYVMLSIGLNIVVGLAGLLDLGYVGFYAVGAY 153

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L    G   W  +P++ +++   G ++G P L+ RGDYLAI TL   EI + +L  
Sbjct: 154 TYALLAEYAGFGFWSALPIAGIMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRN 213

Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
              IT G  GI    +    G +         ++   FF    +     I +Y + L + 
Sbjct: 214 LTDITGGPNGIGSIPKPTLFGLSFERRAPGGLQTFHEFFDIDYNSNYKVILLYMIALLLV 273

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+  +I  L R  I  AW  +R+++ A  +L       KLSAF + + F G AG FFAA
Sbjct: 274 LLALFVINRLIRMPIGRAWEALREDEVACRALGLNPTLVKLSAFTIGAGFAGFAGCFFAA 333

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  ++P+ F F E++++++IV+LGGM S   +     +++ ++E               
Sbjct: 334 RQGLVTPESFTFIESVMILAIVVLGGMGSQLGVILGAVVMVLLLE--------------- 378

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
               F      +  +A+ ++++ R   LL ++ P   L+
Sbjct: 379 -RREFAEYRMLIFGLAMIVMMIWRPQGLLPMQRPHLELK 416


>gi|317407710|gb|EFV87641.1| ABC transporter [Achromobacter xylosoxidans C54]
          Length = 362

 Score =  136 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 93/339 (27%), Positives = 156/339 (46%), Gaps = 4/339 (1%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  +A++  +L  L      + +    +    L+YVM + GL+IVVG  GLL L  +  Y
Sbjct: 15  LIGIALIGIVLAVLPFVIGMAGQSWVRILNFALLYVMLSLGLNIVVGFAGLLDLGYIAFY 74

Query: 75  AIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           A+GAY++ +L S +    L  W ++P++  ++   G+++G P+LK RGDYLAI TL   E
Sbjct: 75  AVGAYTWALLASPHFGLHLPFWAILPIALAVACLFGVLLGAPTLKLRGDYLAIVTLGFGE 134

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +  L       N   G    +R+        +  R        V      YY+LL + 
Sbjct: 135 IIRIFLNNLNAPVNITNGPQGINRIDTFKVGEFAFGRTESLLGIRVTGPEKYYYLLLALT 194

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +   + + L+ + I  AW  IR+++ A  ++       KL AFA+ ++F G+AGA FA+
Sbjct: 195 LIIILVCVRLQNSRIGRAWEAIREDEIAAKAMGINTRNIKLLAFAMGASFGGVAGALFAS 254

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  +SP+ F   E+I ++ +V+LGGM  +  +     IL  + E    +       +  
Sbjct: 255 MQGFVSPESFSLMESISILCMVVLGGMGHIPGVILGALILAALPEFLRAVVEPVQQMVFG 314

Query: 312 -FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
                       L  +A+  V+L R   L         L
Sbjct: 315 AVVLDPEGIRMLLFGLAMVCVMLFRPAGLWPSAVRKREL 353


>gi|293393962|ref|ZP_06638268.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Serratia odorifera DSM
           4582]
 gi|291423522|gb|EFE96745.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Serratia odorifera DSM
           4582]
          Length = 427

 Score =  136 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 105/331 (31%), Positives = 158/331 (47%), Gaps = 24/331 (7%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                   +    +    LIYVM   GL++VVG  GLL L     YAIGAY+Y +L   Y
Sbjct: 100 VAWPFFVSRGTVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYY 159

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           GL  W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  
Sbjct: 160 GLGFWESLPLAGIVTAAFGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTDITGGPN 219

Query: 149 GIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           GI    +    G             +   FF          IF+Y V L +  L+  +I 
Sbjct: 220 GISQIPKPTLFGLEFSRSARDGGWDTFHNFFGLQYDPSDRIIFLYLVALLLVVLTLFVIN 279

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+
Sbjct: 280 RLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTISAAFAGFAGTLFAARQGFVSPE 339

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F F E+  V++IV+LGGM S   +  A  +L+   E+   +N Y               
Sbjct: 340 SFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSREMMRDLNEY--------------- 384

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              L+   + L+++ R   LL ++ P   L+
Sbjct: 385 SMLLLGALMVLMMIWRPQGLLPMKRPQLKLK 415


>gi|242279020|ref|YP_002991149.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638]
 gi|242121914|gb|ACS79610.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638]
          Length = 407

 Score =  136 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 100/322 (31%), Positives = 158/322 (49%), Gaps = 26/322 (8%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            V  +  F          Y  ++    LIYV+   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 92  AVIAVAGFAIAFPKLFSMYQVNVMTSALIYVVLGLGLNIVVGLAGLLDLGFVAFYAVGAY 151

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           SY ++   +G+S W+ +P+ A++   CG+++G P L+ RGDYLAI TL   EI + +L  
Sbjct: 152 SYALMNMYWGISFWVALPLGALLGAFCGILLGFPVLRLRGDYLAIVTLGFGEIIRLVLEN 211

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W   T+G AGI    R  F                 F+    FMYY++L +   +  ++ 
Sbjct: 212 WGSFTHGPAGISNIARPEFF-----------GLAKGFMAQINFMYYLMLVLVVFTIFVVN 260

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L+ + I  AW+ +R+++ A  ++    +  KL AF++ + + GM G  FAA    I+P 
Sbjct: 261 RLKNSRIGRAWQALREDEIACQAMGIDKMKTKLMAFSLGATWAGMVGVVFAAKTTFINPA 320

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F F E+ I++SIV+LGGM S+  +     +LI + E     + Y               
Sbjct: 321 SFTFLESAIILSIVVLGGMGSILGVILGALVLILLPEYMRDFSEY--------------- 365

Query: 320 HTTLMVIALFLVILMRSHSLLR 341
              +    + LV++ R   L+R
Sbjct: 366 RMLIFGATMVLVMVFRPQGLVR 387


>gi|213426840|ref|ZP_03359590.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Typhi str. E02-1180]
          Length = 332

 Score =  136 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 105/338 (31%), Positives = 160/338 (47%), Gaps = 24/338 (7%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             LL+          +    +    +IY++   GL++VVG  GLL L     YAIGAY++
Sbjct: 1   MALLVIAVAWPFMVSRGSVDIATMTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTF 60

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +L   YGL  W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+   
Sbjct: 61  ALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNT 120

Query: 142 PITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            IT G  GI    +    G             +   FF          IF+Y V L +  
Sbjct: 121 EITGGPNGISQIPKPTLFGLEFSRNTREGGWDTFSNFFGVKYDPSDRVIFLYLVALLLVV 180

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           LS  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA 
Sbjct: 181 LSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAAR 240

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  +SP+ F F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y        
Sbjct: 241 QGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY-------- 292

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                     ++   + L+++ R   LL +  P   L+
Sbjct: 293 -------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 323


>gi|323700718|ref|ZP_08112630.1| inner-membrane translocator [Desulfovibrio sp. ND132]
 gi|323460650|gb|EGB16515.1| inner-membrane translocator [Desulfovibrio desulfuricans ND132]
          Length = 428

 Score =  135 bits (340), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 95/314 (30%), Positives = 152/314 (48%), Gaps = 26/314 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                  Y  ++ I  LIY++   GL+IVVG  GLL L  V  YA+GAY+Y +    + L
Sbjct: 126 FPLVFNLYQTNIMITCLIYIVLGLGLNIVVGLAGLLDLGYVAFYAVGAYAYALCNMHWHL 185

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W ++PV A++    G+++G P L+ +GDYLAI TL   EI + IL  W  +T G +GI
Sbjct: 186 GFWYMLPVGAVLGAVLGLLLGFPVLRLKGDYLAIVTLGFGEIIRLILENWGDVTMGPSGI 245

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R              F    +     ++M+Y+++G+  L+   +  L+ + I  AW
Sbjct: 246 SSIARPG-----------LFGLELNVEGSTLYMFYIMVGLMVLTIFCVNRLQNSRIGRAW 294

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +R+++ A  ++    +  KL AFA+ + + GMAG  FAA    I+P  F F E+ I++
Sbjct: 295 LALREDEIACQAMGIDKMKTKLMAFALGATWAGMAGVVFAAKTTFINPASFTFWESAIIL 354

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           SIV++GGM S+  +     ILI V E       +                  L    + L
Sbjct: 355 SIVVIGGMGSIRGVIAGAVILILVPEYLREFAQF---------------RMLLFGSIMVL 399

Query: 331 VILMRSHSLLRLRT 344
           V++ R   L+  + 
Sbjct: 400 VMVFRPQGLISAKR 413


>gi|307326074|ref|ZP_07605272.1| inner-membrane translocator [Streptomyces violaceusniger Tu 4113]
 gi|306888296|gb|EFN19284.1| inner-membrane translocator [Streptomyces violaceusniger Tu 4113]
          Length = 584

 Score =  135 bits (340), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 81/348 (23%), Positives = 136/348 (39%), Gaps = 34/348 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V  L+  +     + +     +G+ I I+   A GL+IVVG  GLL L  V    +GAY
Sbjct: 231 LVAALITAIVFPFFQDKSSFTELGVNIAIFATVALGLNIVVGLAGLLDLGYVAFLGVGAY 290

Query: 80  SYVI------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +  +               W  +     +S   G+I+G P+L+ RGDYLAI TL   EIF
Sbjct: 291 TAALVSGSTASTLDVRFPFWAAVIAGGAVSLIFGVIIGAPTLRLRGDYLAIVTLGFGEIF 350

Query: 134 QNILIKWKP-----ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +  ++         +TNG  GI     L   G                       Y ++L
Sbjct: 351 RLAMLNLDGTSGPSVTNGPDGIPNIPPLEIFGFNFNDDHSIAGLSLDSNGN---YYLLML 407

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  +   I      + I  AW  IR+++ A  ++       KL AFA+ +   G+AGA 
Sbjct: 408 LVTIVVVLIFSRAGNSRIGRAWVAIREDETAATAMGINGFRVKLVAFALGATLAGVAGAV 467

Query: 249 FAASRDRISPDMFKFSENI-----IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           +A  +  + P+ + F+  +      +++ VILGGM ++        +L  + +    +  
Sbjct: 468 WAHFQSTVVPEQYVFAGPVPPNSTFLVAAVILGGMGTIGGPLLGATLLYLIPKKLEFLQD 527

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           Y                     IAL L++  R   ++  R        
Sbjct: 528 Y---------------QLLAFGIALILLMRFRPEGIVPNRRQQLEYHE 560


>gi|254470000|ref|ZP_05083404.1| inner-membrane translocator [Pseudovibrio sp. JE062]
 gi|211960311|gb|EEA95507.1| inner-membrane translocator [Pseudovibrio sp. JE062]
          Length = 444

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 181/341 (53%), Gaps = 20/341 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +LAVV P  L  +LG+  S++YI  + I +L YVM  WGL+IVVG  GLL L  V  Y
Sbjct: 105 MLVLAVVLPFALMFWLGSRGSRQYI-DLAILVLTYVMLGWGLNIVVGLAGLLDLGYVAFY 163

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GAYSY +L   +G S W+ +P++ +++   G+I+G P L+ RGDYLAI TL   EI +
Sbjct: 164 AVGAYSYALLAHYFGFSFWICLPLAGILAAFWGIILGFPVLRLRGDYLAIVTLAFGEIIR 223

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +L+ W   T G  G+    R  F G            FF    + +   IF+YY++  M
Sbjct: 224 VVLLNWYEFTGGPDGLSGIPRPSFFGLEFTRGEGGFADFFGLKYNSIHRIIFLYYLIFIM 283

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L+  + + LRR  I  AW  +R+++ A  +L       KL+AFA+ + F G AG+FFA
Sbjct: 284 AMLTNFVTMRLRRMPIGRAWEALREDEIACRALGINTTNTKLTAFALGAMFGGFAGSFFA 343

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             +  ISP+ F F E+ I+++IV+LGG+ S   +  A  ++IG  E       Y      
Sbjct: 344 TRQGFISPESFTFLESAIILAIVVLGGLGSQMGVVIAAVVMIGGFEFFREFEEY------ 397

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                       +  + + ++++ +   L+  RTPS  L +
Sbjct: 398 ---------RMLVFGLIMVVIMVWKPRGLVSSRTPSVALSK 429


>gi|300936486|ref|ZP_07151406.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 21-1]
 gi|300458408|gb|EFK21901.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 21-1]
          Length = 425

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 162/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  LL+          +    +    +IY++   GL++VVG  GLL L     YAIGA
Sbjct: 91  LFLVALLVIAVAWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YGL  W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTFALLNHYYGLGFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +  F G             +   FF          IF+Y V L 
Sbjct: 211 NNTEITGGPNGISQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  LS  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 271 LVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y     
Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        ++   + L+++ R   LL +  P   L+
Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|94311414|ref|YP_584624.1| leucine/isoleucine/valine transporter permease subunit [Cupriavidus
           metallidurans CH34]
 gi|93355266|gb|ABF09355.1| leucine/isoleucine/valine transporter subunit, membrane component
           of ABC superfamily [Cupriavidus metallidurans CH34]
          Length = 424

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 97/341 (28%), Positives = 159/341 (46%), Gaps = 24/341 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            V+ LL    +      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G Y
Sbjct: 99  AVWLLLAVGLVFPFLGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGGY 158

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L   +GL+ W  +P++A ++   G ++G P L+ RGDYLAI TL   EI + +L  
Sbjct: 159 TYALLNQYFGLTFWECLPLAAGLAATFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLLNN 218

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLGM 190
              +T G  G+    +    G  +          +       P +     IF+Y + L +
Sbjct: 219 LTSLTGGPDGVSGIPKPTVFGIELARSASVEGAKTFNDLIGIPYTGQHMVIFLYLLGLLL 278

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              +  +   L R  +  AW  +R+++ A  SL       KLSAF + ++F G+AGAFFA
Sbjct: 279 VGFTLFVTSRLIRMPMGRAWEALREDEIACRSLGLNPTRIKLSAFTLGASFAGLAGAFFA 338

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           A +  ++P+ F F E+ +++++V+LGGM S   +  A  +L  + E+      Y      
Sbjct: 339 ARQGLVTPESFTFIESALILAVVVLGGMGSQLGVILAAILLTVLPEVARDFAEY------ 392

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                       +  + + L+++ R   LL    P   L R
Sbjct: 393 ---------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPR 424


>gi|297519583|ref|ZP_06937969.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli OP50]
          Length = 377

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 55  WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 114

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 115 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 174

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 175 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 234

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 235 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 294

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 295 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 339

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 340 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 368


>gi|115359177|ref|YP_776315.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia ambifaria AMMD]
 gi|115284465|gb|ABI89981.1| L-leucine ABC transporter membrane protein / L-valine ABC
           transporter membrane protein / L-isoleucine ABC
           transporter membrane protein [Burkholderia ambifaria
           AMMD]
          Length = 423

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 100/342 (29%), Positives = 158/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V++ LL    +      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 97  VVIWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GLS W  +P++A+ +   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 157 YTYAMLNQYFGLSFWECLPIAAVAAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 217 NLTSLTGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLIALV 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + +AF G+ GAFF
Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423


>gi|293606219|ref|ZP_06688582.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292815366|gb|EFF74484.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 362

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 92/339 (27%), Positives = 157/339 (46%), Gaps = 4/339 (1%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  +A++  +L  L      + +    +    L+YVM + GL+IVVG  GLL L  +  Y
Sbjct: 15  LIGIALIGIVLAVLPFVIGMAGQSWVRILNFALLYVMLSLGLNIVVGFAGLLDLGYIAFY 74

Query: 75  AIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           A+GAY++ +L S +    L  W ++P++  ++   G+++G P+LK RGDYLAI TL   E
Sbjct: 75  AVGAYTWALLASPHFGLHLPFWAILPIALAVACLFGVLLGAPTLKLRGDYLAIVTLGFGE 134

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +  L       N   G    +R+        +  R               YY+LL + 
Sbjct: 135 IIRIFLNNLNAPVNITNGPQGINRIDPFKVGEFTFGRTETLMGIRFTGPEKYYYLLLALT 194

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +   + + L+ + I  AW  IR+++ A  ++       KL AFA+ ++F G+AGA FA+
Sbjct: 195 LIIIVVCVRLQNSRIGRAWEAIREDEIAAKAMGINTRNIKLLAFAMGASFGGVAGALFAS 254

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  +SP+ F   E+I ++ +V+LGGM  +  +     IL  + E    +   + + +  
Sbjct: 255 MQGFVSPESFSLMESISILCMVVLGGMGHIPGVILGALILAALPEFLRAVVEPFQHMVFG 314

Query: 312 -FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
                       L  +A+  V+L R   L         L
Sbjct: 315 AVVLDPEGIRMLLFGLAMVCVMLFRPAGLWPSAVRKREL 353


>gi|238028399|ref|YP_002912630.1| inner-membrane translocator [Burkholderia glumae BGR1]
 gi|237877593|gb|ACR29926.1| Inner-membrane translocator [Burkholderia glumae BGR1]
          Length = 390

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 88/331 (26%), Positives = 149/331 (45%), Gaps = 17/331 (5%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
            FL       Y   +    ++YVM A GL++VVG  GLL L  +  YA+GAY   +L S 
Sbjct: 37  PFLIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAFYAVGAYVAALLTSP 96

Query: 88  Y----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           +                    W+++PV+  ++   G+++G P+L+ RGDYLAI TL   E
Sbjct: 97  HLTTQFAWIAAMFPNGLHTPYWVVVPVAMALAALAGVLLGAPTLRLRGDYLAIVTLGFGE 156

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +  +       N   G      +  L     +L +        +      YYV +   
Sbjct: 157 IVRIFMNNLDRPINITNGPQGITGVAPLHFGSFNLSQTHTLFGFSITSVYLYYYVFVICS 216

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L   +   L+ + I  AW  IR+++ A  ++       KL AFA+ ++F G++G+ F A
Sbjct: 217 LLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAMGASFGGLSGSMFGA 276

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  +SP+ F F E+I+V++ V+LGGM  +  +     +L    E+         ++L  
Sbjct: 277 FQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAVFPEVLRSTMGPLQHALFG 336

Query: 312 FDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
            +     +    L  +A+ L++L RS  L  
Sbjct: 337 HEIVDTEVIRQALYGLAMVLIMLYRSEGLWP 367


>gi|37522260|ref|NP_925637.1| branched chain amino acid ABC transporter [Gloeobacter violaceus
           PCC 7421]
 gi|35213260|dbj|BAC90632.1| glr2691 [Gloeobacter violaceus PCC 7421]
          Length = 369

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 99/326 (30%), Positives = 157/326 (48%), Gaps = 22/326 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   LL+   +  T    Y+ ++ + + +Y++ A GL+IVVG  GLL L  +  +A+GA
Sbjct: 40  LLGVGLLIPALMLLTSQPSYLANVAVTVAVYMVLAMGLNIVVGLAGLLDLGYIAFFAVGA 99

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y I         WL +PV+A+++   G+++G P+L  RGDYLAI TL   EI +  L 
Sbjct: 100 YTYAIGAPHGLS-FWLALPVAALLAAGFGVLLGAPTLPLRGDYLAIVTLGFGEIIRISLN 158

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +T G AGI            V   I    F    +   + +Y++ L        + 
Sbjct: 159 NLDWLTRGPAGISGVPAP------VIPWIGAKGFTWLTLYQPLQLYFIALAFVAFVYWMT 212

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L+++ +  AW  IR+++ A  ++    +  KL AFA  +A  GM G  FA     +SP
Sbjct: 213 SRLKQSRVGRAWVAIREDEIAAAAMGVDTVKLKLLAFATGAALAGMVGVLFAVQLTYVSP 272

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           D F   E+++V+S+V+LGGM S+  +A    ILI + E   G + Y              
Sbjct: 273 DSFTLIESVMVVSMVVLGGMGSVPGVALGALILIVLPEALRGFSEY-------------- 318

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRT 344
               L   A+ LV+L+R   LL  R 
Sbjct: 319 -RLLLFGAAMILVMLIRPQGLLGERQ 343


>gi|170697113|ref|ZP_02888208.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
 gi|172063957|ref|YP_001811608.1| inner-membrane translocator [Burkholderia ambifaria MC40-6]
 gi|170137949|gb|EDT06182.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
 gi|171996474|gb|ACB67392.1| inner-membrane translocator [Burkholderia ambifaria MC40-6]
          Length = 423

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 100/342 (29%), Positives = 158/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V++ LL    +      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 97  VVIWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GLS W  +P++A+ +   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 157 YTYAMLNQYFGLSFWECLPIAAIAAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 217 NLTSLTGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLIALV 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + +AF G+ GAFF
Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423


>gi|312959465|ref|ZP_07773982.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
 gi|311286182|gb|EFQ64746.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
          Length = 417

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 103/340 (30%), Positives = 165/340 (48%), Gaps = 23/340 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +      +    +   ILIYV+   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 93  IIIGLIVAALIWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAY 152

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L    G S W+ +P++ M +   G ++G P L+ RGDYLAI TL   EI +  L  
Sbjct: 153 TYALLSHYLGWSFWICLPLAGMAAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRN 212

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR--------SLIRFFRFPSSFVIYEIFMYYVLLGMC 191
              IT G  GI    +  F G +          +   +F    + V   +F+Y V L + 
Sbjct: 213 LTDITGGPNGISSIPKPTFFGLSFDRSAAEGMQTFHEYFGIAYNPVSKVVFLYLVALLLA 272

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
             +  +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG+FFAA
Sbjct: 273 LAALFVINRLLRMPIGRAWEALREDEIACRALGLNPTIIKLSAFTLGAAFAGFAGSFFAA 332

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  ++P+ F F E+ I+++IV+LGGM S   +  A  ++I + E+    + Y       
Sbjct: 333 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPEMMREFSEY------- 385

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                      +    + L+++ R   LL ++ P   L +
Sbjct: 386 --------RMLMFGAMMVLMMIWRPQGLLPMQRPHMELRK 417


>gi|296269450|ref|YP_003652082.1| inner-membrane translocator [Thermobispora bispora DSM 43833]
 gi|296092237|gb|ADG88189.1| inner-membrane translocator [Thermobispora bispora DSM 43833]
          Length = 376

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 86/341 (25%), Positives = 143/341 (41%), Gaps = 29/341 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQ-ILIYVMFAWGLSIVVGSLGLL 66
             ++     L+ +               + +  S+    I  +V+ A GL++VVG  GLL
Sbjct: 37  WARWCVYGLLILLAIIAPHPAIGSFMTPESHWQSVLFSPIGTFVLLAIGLNVVVGQAGLL 96

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L  V  YAIGAY+  I G++YG + W ++ +   ++   G+I+G P+L+ RGDYLAI T
Sbjct: 97  DLGYVAFYAIGAYTMAIFGTKYGWNFWGILVIGIFMTAVSGIILGSPTLRLRGDYLAIVT 156

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI +      + I  G  GI        +            F   F++  +  YY+
Sbjct: 157 LGFGEIVRITAQNTEYI-GGARGITNIPHPNPM------------FGVEFLLDPLPYYYL 203

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           LLG   +S  I+  L  + +  AW  IR+++ A   +       KL +F V +   G  G
Sbjct: 204 LLGAIIVSIIIVKRLNNSRVGRAWEAIREDEDAAELMGVPTFRFKLLSFFVGAMIGGATG 263

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             +A+    I P  F F  +  +++ V+LGG  +L  +     ++  + E       Y  
Sbjct: 264 VIWASKVIAIQPPNFPFILSATILAAVVLGGSGNLPGVILGAFLIAWLPERFREFADY-- 321

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                           +   AL L++ +R   LL  R    
Sbjct: 322 -------------RMLVFGAALVLMMALRPEGLLPSRRRRL 349


>gi|154247976|ref|YP_001418934.1| ABC transporter related [Xanthobacter autotrophicus Py2]
 gi|154162061|gb|ABS69277.1| ABC transporter related [Xanthobacter autotrophicus Py2]
          Length = 663

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 74/313 (23%), Positives = 139/313 (44%), Gaps = 1/313 (0%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            +IL     +  L     L    +  Y   + I I IY +   GL +V G  G +S+   
Sbjct: 4   RRILSTGFPILGLAALAVLPFVVTSPYYLHLTITIAIYAILLLGLDVVFGYTGEVSIGHA 63

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             + IGAY+   L   +G+  W  +P++ +++   G+++ LP+L+  G YLA+ TL    
Sbjct: 64  ALFGIGAYTAGCLAMHFGIGFWPALPLAIIVTALFGIVLALPALRVTGPYLAMVTLAFGT 123

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I Q ++ +   +TNG  GI +   L+     +   I  F      +  E+  +Y+     
Sbjct: 124 IVQILINEMTDLTNGPLGIKLTTPLFLDLRWLGDTIPLFDMSLKRM-KEVEYFYIAAVAL 182

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+  +I  +  + +  A+  +RD+  A   +  ++   K+ AF VS+ F G+AGA FA 
Sbjct: 183 VLTLLVINRILASHLGRAFEALRDSPIASDCMGVSVYKHKVIAFVVSAGFAGLAGALFAY 242

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           S   I+P+ F F  ++  +  V +GG  S         I++ +  L   +  + + +   
Sbjct: 243 SEQYIAPNNFGFELSVQFLLAVTVGGRKSRLGPIIGAVIIVFLPNLLSDIVLFRYIAGTI 302

Query: 312 FDCSFNMRHTTLM 324
              +      + +
Sbjct: 303 AVIALIAGARSFI 315


>gi|205354820|ref|YP_002228621.1| leucine/isoleucine/valine transporter permease [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|205274601|emb|CAR39651.1| high-affinity branched-chain amino acid transport system permease
           protein [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|326629964|gb|EGE36307.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 9]
          Length = 425

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 160/341 (46%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  LL+          +    +    +IY +   GL++VVG  GLL L     YAIGA
Sbjct: 91  LFLMALLVIAVAWPFMVSRGSVDIATMTMIYSILGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YGL  W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G             +   FF          IF+Y V L 
Sbjct: 211 NNTEITGGPNGISQIPKPTLFGLEFSLNTREGGWDTFSNFFGVKYDPSDRVIFLYLVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  LS  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 271 LVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y     
Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        ++   + L+++ R   LL +  P   L+
Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|195940784|ref|ZP_03086166.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli O157:H7 str. EC4024]
          Length = 425

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 101/329 (30%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IYV+   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYVILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+    +T G  GI
Sbjct: 163 GFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEVTGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          I++Y V L +  ++  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGIKYDPSDRVIWLYLVALLLVVITLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL       KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|145301112|ref|YP_001143953.1| leucine/isoleucine/valine transporter permease subunit [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142853884|gb|ABO92205.1| ABC-type branched-chain amino acid transporter, permease protein
           [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 422

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 162/342 (47%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
                +LLF       + +    +    LIY+M   GL++VVG  GLL L  V  YA+GA
Sbjct: 96  VTAILVLLFAVSWPFMASRGAIDLATLALIYIMLGLGLNVVVGLAGLLDLGYVGFYAVGA 155

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           YSY +L + +GLS W  +P++ +++   G ++G P L+ RGDYLAI TL   EI + +L 
Sbjct: 156 YSYALLNTYFGLSFWECLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLN 215

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G             +   FF    +     IF+Y + L 
Sbjct: 216 NMTSLTGGPNGISGIPKPTLAGLEFNRTVKDGGFGTFHDFFGIAYNANHKVIFLYLMALV 275

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +I  L R  +  AW  +R+++ A  SL       KL+AF + + F G AG+FF
Sbjct: 276 LVVATLFVINRLLRMPLGRAWEALREDEIACKSLGLNPTIIKLTAFTIGATFAGFAGSFF 335

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A+ +  ISP+ F F E+ IV++IV+LGGM S   +  A  ++  + EL    N Y     
Sbjct: 336 ASRQGFISPESFVFIESAIVLAIVVLGGMGSQIGVVLAAIVMTVLPELAREFNEY----- 390

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + +  +++ R   LL +  P   L++
Sbjct: 391 ----------RMLMFGLLMVFMMIWRPQGLLPMTRPHLELQK 422


>gi|34496959|ref|NP_901174.1| leucine/isoleucine/valine transport system permease
           [Chromobacterium violaceum ATCC 12472]
 gi|34102815|gb|AAQ59179.1| leucine/isoleucine/valine transport system permease protein
           [Chromobacterium violaceum ATCC 12472]
          Length = 363

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 92/354 (25%), Positives = 157/354 (44%), Gaps = 6/354 (1%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M +  L   K   +    AV+  +L FL  GA  +      +    L+YVM A GL+IVV
Sbjct: 1   MDLNHLSTGKKMAVFAACAVLLAVLPFLVGGALGNS--WVRIIDFALLYVMLALGLNIVV 58

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           G  GLL L  +  YAIGAY+Y +L S +       +L IP+ A  +   G+++G P LK 
Sbjct: 59  GFAGLLDLGFIAFYAIGAYTYALLSSPHFDIHWLFFLTIPLGAAFASLGGVLLGTPVLKL 118

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           +GDYLAI TL   EI +  +       N   G    + +  +     SL +         
Sbjct: 119 KGDYLAIVTLGFGEIVRIFMNNLNQPVNITNGPQGINLIDPIHIGGASLGQTIELFGLSF 178

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ L +  L   +   L+ + I  AW  +R++  A  ++   I   KL AF +
Sbjct: 179 HNVYLYYYLFLALTVLVVIMAWRLQHSRIGRAWVALREDDIAAAAMGINIRNIKLLAFGL 238

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+AG  FA+ +  +SP+ F   E+I+++++++LGGM  +  +     +L    E+
Sbjct: 239 GALSGGVAGGLFASFQGFVSPESFSLLESIMILAMIVLGGMGHIPGVILGAVVLTIAPEI 298

Query: 298 CCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              +        +             L  +A+ +++L+R   +   +      +
Sbjct: 299 LRDVIGPLQMKTVGRMLIDPENARMLLFGLAMVVMMLVRPEGMWPSKRRKAEFQ 352


>gi|213420728|ref|ZP_03353794.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 314

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 103/320 (32%), Positives = 156/320 (48%), Gaps = 24/320 (7%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
             +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL  W  +P++
Sbjct: 1   VDIATMTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGLGFWTCLPLA 60

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            ++S A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI    +    
Sbjct: 61  GLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGISQIPKPTLF 120

Query: 160 GTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
           G             +   FF          IF+Y V L +  LS  +I  L R  +  AW
Sbjct: 121 GLEFSRNTREGGWDTFSNFFGVKYDPSDRVIFLYLVALLLVVLSLFVINRLLRMPLGRAW 180

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F F+E+  V+
Sbjct: 181 EALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFAESAFVL 240

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +IV+LGGM S   +  A  +L+   EL    N Y                  ++   + L
Sbjct: 241 AIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SMLMLGGLMVL 285

Query: 331 VILMRSHSLLRLRTPSNFLE 350
           +++ R   LL +  P   L+
Sbjct: 286 MMIWRPQGLLPMTRPQLKLK 305


>gi|296105144|ref|YP_003615290.1| branched-chain amino acid transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295059603|gb|ADF64341.1| branched-chain amino acid transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 425

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 101/329 (30%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IYV+   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFVVSRGTVDIATLTMIYVILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+    +T G  GI
Sbjct: 163 GFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEVTGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          I++Y V L +  ++  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGVKYDPSDRVIWLYLVALLLVVITLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL       KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|299132367|ref|ZP_07025562.1| ABC transporter related protein [Afipia sp. 1NLS2]
 gi|298592504|gb|EFI52704.1| ABC transporter related protein [Afipia sp. 1NLS2]
          Length = 598

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 77/331 (23%), Positives = 143/331 (43%), Gaps = 30/331 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            ++L  LA +   +  + L  T   +Y   + +   IY + A GL+++VG  GL+SL   
Sbjct: 3   QRLLTPLAFIALAIFLVALPFTAENEYSLRLFMLFTIYAIVALGLNVLVGLAGLISLGQA 62

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +A+GAY+  IL +R GL   L      +++GA G ++  P+++ RG YLA+ T+    
Sbjct: 63  GLFALGAYTGAILATRLGLDFVLAAVAGTVVAGAFGALLAYPTVRVRGVYLAVITIAFGL 122

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +N++I+W  +T G  GI    +    G  +                    Y VL  + 
Sbjct: 123 IVENVIIEWHHLTGGTTGISSIPKPTLFGWPLGGFRY---------------YSVLAVLL 167

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           FL   +   ++++    A   +  ++ A       ++  +  AF +++A  G+ G  +A 
Sbjct: 168 FLVVLVTHNIKQSRYGRAMLAVSQSETAARGTGLNVVSVRTLAFVIAAATAGLGGVLYAF 227

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               ISPD F F+++I  + +V+LGG  S         +L  + E    + ++       
Sbjct: 228 LNLYISPDSFTFNDSIRFLLMVVLGGAGSTVGALLGALVLTYLPEYLQQLQYWQQ----- 282

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         + L LV+ +  H +   
Sbjct: 283 ----------FAYGLLLALVMFVLPHGIFGT 303


>gi|74314056|ref|YP_312475.1| leucine/isoleucine/valine transporter permease subunit [Shigella
           sonnei Ss046]
 gi|73857533|gb|AAZ90240.1| high-affinity branched-chain amino acid transport [Shigella sonnei
           Ss046]
 gi|323164784|gb|EFZ50576.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Shigella sonnei 53G]
          Length = 425

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|62182061|ref|YP_218478.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|62129694|gb|AAX67397.1| ABC superfamily (membrane), branched-chain amino acid transporter,
           high-affinity [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322716549|gb|EFZ08120.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
          Length = 425

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 162/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  LL+          +    +    +IY++   GL++VVG  GLL L     YAIGA
Sbjct: 91  LFLMALLVIAVAWPFMVSRGSVDIATMTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YGL  W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI  + +    G             +   FF          IF+Y V L 
Sbjct: 211 NNTEITGGPNGISQSPKPTLFGLEFSRNTREGGWDTFSNFFGVKYDPSDRVIFLYLVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  LS  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 271 LVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y     
Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        ++   + L+++ R   LL +  P   L+
Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|317404909|gb|EFV85277.1| high-affinity branched-chain amino acid transport system
           [Achromobacter xylosoxidans C54]
          Length = 411

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++  +L         + +    +   +LIYVM   GL+IVVG  GLL L  V  YA+GA
Sbjct: 85  LLMLLILAVAVTWPFFAGRSSVDIATLVLIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGA 144

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L    G S W  +P S  ++   G ++G P L+ RGDYLAI TL   E+ + +LI
Sbjct: 145 YTYALLYHWGGWSFWEALPFSGAMAALFGFVLGFPVLRLRGDYLAIVTLGFGEMIRLLLI 204

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G  +          +   FF          I++Y + L 
Sbjct: 205 NLNTLTGGPDGISGIPKPSVFGLEMTRRASEEGATTFHDFFGLTFQNQHMVIYLYMMALL 264

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  ++  +   L R  +  AW  +R+++ A  SL       KLSAF + + F G  GAFF
Sbjct: 265 LALVTLFVSTRLIRMPVGRAWEALREDEIACRSLGLNPTRIKLSAFTLGATFAGFGGAFF 324

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + EL      Y     
Sbjct: 325 AARQGMVNPESFTFIESALILAIVVLGGMGSQVGVILAAILLTVLPELAREFAEY----- 379

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL ++ P   L +
Sbjct: 380 ----------RMLMFGLVMVLMMMWRPQGLLPMKRPHVELAK 411


>gi|16762741|ref|NP_458358.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|29144228|ref|NP_807570.1| leucine/isoleucine/valine transporter permease [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|161616607|ref|YP_001590572.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167549223|ref|ZP_02342982.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168232706|ref|ZP_02657764.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168235153|ref|ZP_02660211.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168241711|ref|ZP_02666643.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168260711|ref|ZP_02682684.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168465160|ref|ZP_02699052.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168818624|ref|ZP_02830624.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194450660|ref|YP_002047587.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194470090|ref|ZP_03076074.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194736808|ref|YP_002116496.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|198242024|ref|YP_002217520.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|200389273|ref|ZP_03215885.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204928724|ref|ZP_03219923.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|207858800|ref|YP_002245451.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|213053211|ref|ZP_03346089.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213649991|ref|ZP_03380044.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Typhi str. J185]
 gi|224585353|ref|YP_002639152.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|289829439|ref|ZP_06547051.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25513242|pir||AH0992 high-affinity branched-chain amino acid transport system permease
           protein STY4250 [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16505047|emb|CAD08068.1| high-affinity branched-chain amino acid transport system permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29139865|gb|AAO71430.1| high-affinity branched-chain amino acid transport system permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|161365971|gb|ABX69739.1| hypothetical protein SPAB_04424 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194408964|gb|ACF69183.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194456454|gb|EDX45293.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194712310|gb|ACF91531.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195632403|gb|EDX50887.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197291619|gb|EDY30971.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197936540|gb|ACH73873.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199606371|gb|EDZ04916.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204322157|gb|EDZ07355.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205325718|gb|EDZ13557.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205333064|gb|EDZ19828.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205338944|gb|EDZ25708.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205344569|gb|EDZ31333.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205350368|gb|EDZ36999.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206710603|emb|CAR34961.1| high-affinity branched-chain amino acid transport system permease
           protein [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|224469881|gb|ACN47711.1| high-affinity branched-chain amino acid transport system permease
           protein [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|320087972|emb|CBY97734.1| High-affinity branched-chain amino acid transport system permease
           protein livM LIV-I protein M [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|322614071|gb|EFY11007.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322617963|gb|EFY14856.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322625423|gb|EFY22249.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322629888|gb|EFY26661.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322632223|gb|EFY28974.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322636426|gb|EFY33133.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322643175|gb|EFY39748.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322651260|gb|EFY47644.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322652827|gb|EFY49166.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322659129|gb|EFY55381.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322663169|gb|EFY59373.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322668656|gb|EFY64809.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322674541|gb|EFY70634.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322678254|gb|EFY74315.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322682490|gb|EFY78511.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322684203|gb|EFY80209.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|323192242|gb|EFZ77474.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323196331|gb|EFZ81483.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323201867|gb|EFZ86930.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323206410|gb|EFZ91371.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323212003|gb|EFZ96830.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323216908|gb|EGA01631.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323222308|gb|EGA06691.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323224322|gb|EGA08611.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323228250|gb|EGA12381.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323233482|gb|EGA17575.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323237056|gb|EGA21123.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323243729|gb|EGA27745.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323246029|gb|EGA30016.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323250805|gb|EGA34683.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323255816|gb|EGA39566.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323261908|gb|EGA45475.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323267700|gb|EGA51182.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323268580|gb|EGA52047.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
 gi|326625301|gb|EGE31646.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 425

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  LL+          +    +    +IY++   GL++VVG  GLL L     YAIGA
Sbjct: 91  LFLMALLVIAVAWPFMVSRGSVDIATMTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YGL  W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G             +   FF          IF+Y V L 
Sbjct: 211 NNTEITGGPNGISQIPKPTLFGLEFSRNTREGGWDTFSNFFGVKYDPSDRVIFLYLVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  LS  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 271 LVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y     
Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        ++   + L+++ R   LL +  P   L+
Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|167585724|ref|ZP_02378112.1| ABC branched-chain amino acid family transporter, inner membrane
           subunit [Burkholderia ubonensis Bu]
          Length = 388

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 83/345 (24%), Positives = 151/345 (43%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   +     ++    +       Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  VTIGILTAAFVIAAPVIIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                 +   +++P++  I+   G+++G P+L+ 
Sbjct: 83  YAVGAYTAALLSSPHLTTQFEWIAQLAPGGLHVPFLIIVPIAMAIAAIFGILLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +     SL +        +
Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHAGDFSLAQTHSLFGIQL 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    L       L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYMYYYLFVLCALLVIWTCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA F + +  +SP+ F F E+I+V++ V+LGGM  +  +     +L    E 
Sbjct: 263 GASFGGLSGAMFGSFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPEF 322

Query: 298 CCGMNFYYFNSLLKFD-CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    +++   D     +    L  +A+ +++L RS  L  
Sbjct: 323 LRSTMSPLQHAIFGHDVVDTEVIRQALYGLAMVIIMLYRSEGLWP 367


>gi|146308849|ref|YP_001189314.1| ABC transporter related [Pseudomonas mendocina ymp]
 gi|145577050|gb|ABP86582.1| monosaccharide ABC transporter ATP-binding protein, CUT2 family
           [Pseudomonas mendocina ymp]
          Length = 830

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 70/321 (21%), Positives = 129/321 (40%), Gaps = 32/321 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L L     A     Y   +     +  +   GL+I++G  G +S   +  YAIGAY 
Sbjct: 13  LAALALLGSSLAFVLDSYSLLVFTFCALAAVVGVGLNILMGLSGQISFGHIAFYAIGAYI 72

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +L         L + ++ + SG  G ++ LP+L+  G YLA+ T+  + +  + LI+W
Sbjct: 73  SALLLMAGLPLG-LALIIAGLGSGLVGALLALPALRVTGPYLAMVTIAFAFMVHHGLIEW 131

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T G  G+                          +   + +  +   +   + +    
Sbjct: 132 QSLTGGANGLIGIPMPA----------------FGGLDGNVGLALLATALMVAALAFYRR 175

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L+ +    A R ++  + A  SL    +  K  AFA+S+   GMAG   A     ISPD 
Sbjct: 176 LQGSGWGRAMRAVKSTEIAARSLGFNPMQTKTLAFALSATLTGMAGGLVAPLMMFISPDS 235

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F FS++I+ +  VI+GG  +L        +++ + E+  G+  Y                
Sbjct: 236 FPFSQSILFVLAVIVGGSGTLFGPVLGALLIVLLPEMLSGLAEY---------------R 280

Query: 321 TTLMVIALFLVILMRSHSLLR 341
             +  + L  V+ +    +L 
Sbjct: 281 LLIFSMLLLAVLWLAPRGVLG 301


>gi|33597487|ref|NP_885130.1| leucine/isoleucine/valine transporter permease subunit [Bordetella
           parapertussis 12822]
 gi|33601883|ref|NP_889443.1| leucine/isoleucine/valine transporter permease subunit [Bordetella
           bronchiseptica RB50]
 gi|33573915|emb|CAE38231.1| high-affinity branched-chain amino acid transport system, permease
           protein [Bordetella parapertussis]
 gi|33576320|emb|CAE33399.1| high-affinity branched-chain amino acid transport system, permease
           protein [Bordetella bronchiseptica RB50]
          Length = 412

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 100/341 (29%), Positives = 159/341 (46%), Gaps = 24/341 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V  L+    +    S +    +   +LIYVM   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 87  LVVLLIAVAVIWPFFSGRSSVDIATLVLIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGAY 146

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L    G S W  +P S  ++   G ++G P L+ RGDYLAI TL   EI + +LI 
Sbjct: 147 TYALLYHWGGWSFWEALPFSGAVAALFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLLIN 206

Query: 140 WKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190
              +T G  GI    +   LG  +         ++      +        I++Y + L +
Sbjct: 207 LNMLTGGPDGISGLPKPSVLGMEMARRASTEGGQTFHEIMGWTFQNQHMVIYLYLMALAL 266

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              +  +   L R  +  AW  +R+++ A  SL       KLSAF + + F G  GAFFA
Sbjct: 267 ALATLFVSTRLIRMPVGRAWEALREDEIACRSLGLNPTRIKLSAFTLGAMFAGFGGAFFA 326

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           A +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + EL      Y      
Sbjct: 327 ARQGMVNPESFTFIESALILAIVVLGGMGSQIGVILAAILLTVLPELAREFAEY------ 380

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                       +  + + L+++ R   LL ++ P   L +
Sbjct: 381 ---------RMLMFGLVMVLMMMWRPQGLLPMKRPHVELRK 412


>gi|171320826|ref|ZP_02909830.1| inner-membrane translocator [Burkholderia ambifaria MEX-5]
 gi|171093926|gb|EDT39043.1| inner-membrane translocator [Burkholderia ambifaria MEX-5]
          Length = 423

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 100/342 (29%), Positives = 158/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V++ LL    +      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 97  VVIWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GLS W  +P++A+ +   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 157 YTYAMLNQYFGLSFWACLPIAAIAAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 217 NLTSLTGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLIALV 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + +AF G+ GAFF
Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423


>gi|16766848|ref|NP_462463.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|167990775|ref|ZP_02571874.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|194443944|ref|YP_002042807.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|197249368|ref|YP_002148485.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197263942|ref|ZP_03164016.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|238910436|ref|ZP_04654273.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
 gi|266477|sp|P30296|LIVM_SALTY RecName: Full=High-affinity branched-chain amino acid transport
           system permease protein livM; AltName: Full=LIV-I
           protein M
 gi|217073|dbj|BAA02130.1| LivE protein [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|16422122|gb|AAL22422.1| high-affinity branched-chain amino acid transporter [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|194402607|gb|ACF62829.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|197213071|gb|ACH50468.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197242197|gb|EDY24817.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|205330761|gb|EDZ17525.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|261248715|emb|CBG26553.1| high-affinity branched-chain amino acid transport system permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267995791|gb|ACY90676.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301160102|emb|CBW19622.1| high-affinity branched-chain amino acid transport system permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312914586|dbj|BAJ38560.1| leucine/isoleucine/valine ABC transporter permease protein
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. T000240]
 gi|321226613|gb|EFX51663.1| Branched-chain amino acid transport system permease protein LivM
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|323131921|gb|ADX19351.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
 gi|332990413|gb|AEF09396.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str. UK-1]
          Length = 425

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  LL+          +    +    +IY++   GL++VVG  GLL L     YAIGA
Sbjct: 91  LFLMALLVIAVAWPFMVSRGSVDIATMTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YGL  W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G             +   FF          IF+Y V L 
Sbjct: 211 NNTEITGGPNGISQIPKPTLFGLEFSRSTREGGWDTFSNFFGVKYDPSDRVIFLYLVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  LS  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 271 LVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y     
Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        ++   + L+++ R   LL +  P   L+
Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|291450776|ref|ZP_06590166.1| branched chain amino acid transport permease [Streptomyces albus
           J1074]
 gi|291353725|gb|EFE80627.1| branched chain amino acid transport permease [Streptomyces albus
           J1074]
          Length = 617

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 89/350 (25%), Positives = 141/350 (40%), Gaps = 34/350 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V    +       T++     S+G  ILI+   A GL+IVVG  GLL L  V    +G
Sbjct: 268 VTVTAAFVSAFAFPFTQTSDAYTSVGTNILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 327

Query: 78  AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           AY+  ++           +  W  + + A+ S   G+I+G P+L+  GDYLAI TL   E
Sbjct: 328 AYTAALVSGSPNSPFDVHVPFWAAVLLGALASLIFGVIIGAPTLRLHGDYLAIVTLGFGE 387

Query: 132 IFQNILIKWK-----PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           IF+  +          ITNG  GI     L   G                       Y +
Sbjct: 388 IFRIGMQNLDGTSGPDITNGPNGIPNIPDLEMFGFNFGESHTVLGVELGRFSN---YYLL 444

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +  +   +     ++ I  AW  IR+++ A  ++       KL AFA+ +   G+AG
Sbjct: 445 MLLVTIVVVLVFRRSDQSRIGRAWVAIREDETAARAMGINAFRLKLLAFALGATLAGLAG 504

Query: 247 AFFAASRDRISPDMFKFSENI-----IVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
              A     ++P  +KF E++      +++ VILGGM ++S      A+L  +      M
Sbjct: 505 TVQAHVTYTVTPAQYKFVESMPPNSAFLLAAVILGGMGTVSGPLIGAALLYLIPAKLQFM 564

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             Y                  L  IAL L++  R   L+  R      + 
Sbjct: 565 ADY---------------QLLLFGIALVLLMRFRPEGLVADRRKQLEFKE 599


>gi|161505894|ref|YP_001573006.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. arizonae serovar 62:z4,z23:-- str.
           RSK2980]
 gi|160867241|gb|ABX23864.1| hypothetical protein SARI_04073 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 425

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  LL+          +    +    +IY++   GL++VVG  GLL L     YAIGA
Sbjct: 91  LFLIALLIIAVAWPFMVSRGSVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YGL  W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G             +   FF          IF+Y V L 
Sbjct: 211 NNTEITGGPNGISQIPKPTLFGLEFSRSAREGGWDTFSNFFGVKYDPSDRVIFLYLVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  LS  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 271 LVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y     
Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        ++   + L+++ R   LL +  P   L+
Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|170737627|ref|YP_001778887.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
 gi|169819815|gb|ACA94397.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
          Length = 423

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 99/342 (28%), Positives = 158/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +++ LL    +      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 97  VIIWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GLS W  +P++A+ +   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 157 YTYAMLNQYFGLSFWECLPIAAIAAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 217 NLTSLTGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLIALL 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + +AF G+ GAFF
Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423


>gi|157149039|ref|YP_001456358.1| leucine/isoleucine/valine transporter permease subunit [Citrobacter
           koseri ATCC BAA-895]
 gi|157086244|gb|ABV15922.1| hypothetical protein CKO_04878 [Citrobacter koseri ATCC BAA-895]
          Length = 425

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 102/341 (29%), Positives = 162/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  LL+   +      +    +    +IY++   GL++VVG  GLL L     YAIGA
Sbjct: 91  LFLIALLVIAVVWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YGL  W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +  F G             +   FF          I++Y V L 
Sbjct: 211 NNTEVTGGPNGISQIPKPTFFGLEFSRTAREGGWDTFSNFFGVKYDPSDRVIWLYLVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   S  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 271 LVVFSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y     
Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        ++   + L+++ R   LL +  P   L+
Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|167584632|ref|ZP_02377020.1| inner-membrane translocator [Burkholderia ubonensis Bu]
          Length = 423

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 101/342 (29%), Positives = 159/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+V+ LL    +      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 97  AIVWALLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GL+ W  +P++A+ S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 157 YTYAMLNQYFGLTFWECLPLAAIASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 217 NLTSLTGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLLALL 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + +AF G+ GAFF
Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423


>gi|332701494|ref|ZP_08421582.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332551643|gb|EGJ48687.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 407

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 96/326 (29%), Positives = 158/326 (48%), Gaps = 18/326 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +   L         + +Y   + + +L+YV    GL++VVG  GLL L  +  Y +GA
Sbjct: 91  VWILLALAVALAYPQFTGRYAQDVAVSVLVYVCLGLGLNVVVGLAGLLDLGYIAFYGVGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   YG+  WL +P++AM++   G I+G P+L+ RGDYLAI TL   EI + IL 
Sbjct: 151 YTYALLSVHYGVPFWLCLPIAAMLASLAGCIIGYPTLRMRGDYLAIVTLGFGEIIRIILN 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  +TNG  GI   +    +       +    F    +    ++YYV+L +   +   +
Sbjct: 211 NWMELTNGPNGILGIEAPSMIVPDFEDGL---GFEFISLRKLQYLYYVVLFLAVFTIVAV 267

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L  + I  AW  IR+++ A   +       KL A+A+ + F G+AGAFFAA    +SP
Sbjct: 268 HRLNFSRIGRAWEAIREDETAAELMGVNTFLLKLLAYAMGAVFGGLAGAFFAARMRFVSP 327

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F F E+ +V+++V+LGG+ S+  +      L+ + E+  G   Y              
Sbjct: 328 ESFTFLESAMVLAMVVLGGLGSIPGVILGALALVALPEVFRGFELY-------------- 373

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRT 344
                   A+ L++L+R   L   + 
Sbjct: 374 -RMLAFGGAMTLMMLVRPAGLWPAKR 398


>gi|239909193|ref|YP_002955935.1| branched-chain amino acid ABC transporter permease protein
           [Desulfovibrio magneticus RS-1]
 gi|239799060|dbj|BAH78049.1| branched-chain amino acid ABC transporter permease protein
           [Desulfovibrio magneticus RS-1]
          Length = 409

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 87/323 (26%), Positives = 153/323 (47%), Gaps = 17/323 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++ P+++F       + +Y   + I +L+Y+    GL++VVG  GLL L  +  Y +GA
Sbjct: 92  MLLAPVIVFALAYPMLTNRYAQDVAINVLVYICLGLGLNVVVGLCGLLDLGYIAFYGVGA 151

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   Y +  W+ +P+ A+ +   G  +G P+L+ RGDYLAI TL   EI + ++ 
Sbjct: 152 YTYALLSVHYSVPFWVCLPICAIFAAVAGCFIGYPTLRMRGDYLAIVTLGFGEIVRIVIN 211

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  +T G  GI                   F F    +    ++YY++L +   +   +
Sbjct: 212 NWMALTGGPNGILGIKSPGIYIPHFVDGS--FSFEYLLLRKLEYLYYIILALAAFTIVAV 269

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +  + I  A+  IR+++ A   +       KL A+A+ + F G+AGAFFAA    +SP
Sbjct: 270 HRINFSRIGRAFEAIREDETAAELMGVDTFRFKLLAYALGAVFGGLAGAFFAARMRFVSP 329

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F F E+ +V+++V+LGGM S+  +      L+ + E       Y              
Sbjct: 330 ESFTFIESAMVLAMVVLGGMGSIPGVILGALALVALPEAFREFELY-------------- 375

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
                   A+ +++L+R   L  
Sbjct: 376 -RMLAFGGAMAVMMLVRPAGLWP 397


>gi|170767035|ref|ZP_02901488.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia albertii TW07627]
 gi|170124473|gb|EDS93404.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia albertii TW07627]
          Length = 425

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +   S  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVFSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|167835750|ref|ZP_02462633.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia thailandensis
           MSMB43]
          Length = 389

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 83/343 (24%), Positives = 152/343 (44%), Gaps = 17/343 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + +   ++    +       Y   +    ++YVM A GL++VVG  GLL L  +  YA
Sbjct: 25  IGILIAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAFYA 84

Query: 76  IGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           +GAY+  +L S +                 +  +L++P++  ++   G+++G P+L+ RG
Sbjct: 85  VGAYTAALLSSPHLTSHFDWIAQMVPGGLHVPFFLIVPIAMALAAIFGILLGAPTLRLRG 144

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           DYLAI TL   EI +  +       N   G      +  +     +L +        +  
Sbjct: 145 DYLAIVTLGFGEIVRIFMNNLDRPVNVTNGPQGITGIDPVQVAGFNLSQTHEIFGFSLPS 204

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
               YY+ +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+ +
Sbjct: 205 VYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAMGA 264

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           +F G++GA F A +  +SP+ F F E+++V++ V+LGGM  +  +     +L    E   
Sbjct: 265 SFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLAVFPEFLR 324

Query: 300 GMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                  + L   D     +    L  +A+ +++L RS  L  
Sbjct: 325 STMSPLQHMLFGHDIVDTEVIRQALYGLAMVVIMLYRSEGLWP 367


>gi|53718563|ref|YP_107549.1| putative transport system permease [Burkholderia pseudomallei
           K96243]
 gi|53725942|ref|YP_103561.1| branched-chain amino acid ABC transporter permease [Burkholderia
           mallei ATCC 23344]
 gi|76811078|ref|YP_332556.1| branched-chain amino acid ABC transporter permease [Burkholderia
           pseudomallei 1710b]
 gi|121599720|ref|YP_992281.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein
           [Burkholderia mallei SAVP1]
 gi|124386025|ref|YP_001026874.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein
           [Burkholderia mallei NCTC 10229]
 gi|126440477|ref|YP_001058035.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein
           [Burkholderia pseudomallei 668]
 gi|126454057|ref|YP_001065271.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein
           [Burkholderia pseudomallei 1106a]
 gi|134281091|ref|ZP_01767800.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei 305]
 gi|167000818|ref|ZP_02266623.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia mallei PRL-20]
 gi|167718474|ref|ZP_02401710.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           DM98]
 gi|167737524|ref|ZP_02410298.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei 14]
 gi|167814643|ref|ZP_02446323.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei 91]
 gi|167823111|ref|ZP_02454582.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei 9]
 gi|167844674|ref|ZP_02470182.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           B7210]
 gi|167893203|ref|ZP_02480605.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           7894]
 gi|167901656|ref|ZP_02488861.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei NCTC
           13177]
 gi|167909906|ref|ZP_02496997.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei 112]
 gi|167917928|ref|ZP_02505019.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           BCC215]
 gi|217419827|ref|ZP_03451333.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei 576]
 gi|226194387|ref|ZP_03789985.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|237811186|ref|YP_002895637.1| ABC transporter, hydrophobic amino acid uptake transporter
           [Burkholderia pseudomallei MSHR346]
 gi|238560967|ref|ZP_00442582.2| HmgF [Burkholderia mallei GB8 horse 4]
 gi|242314753|ref|ZP_04813769.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           1106b]
 gi|254175642|ref|ZP_04882302.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia mallei ATCC
           10399]
 gi|254181479|ref|ZP_04888076.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           1655]
 gi|254190867|ref|ZP_04897374.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254196605|ref|ZP_04903029.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei S13]
 gi|254202249|ref|ZP_04908612.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia mallei FMH]
 gi|254207582|ref|ZP_04913932.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia mallei JHU]
 gi|254260206|ref|ZP_04951260.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           1710a]
 gi|52208977|emb|CAH34916.1| putative transport system permease protein [Burkholderia
           pseudomallei K96243]
 gi|52429365|gb|AAU49958.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia mallei ATCC 23344]
 gi|76580531|gb|ABA50006.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia pseudomallei 1710b]
 gi|121228530|gb|ABM51048.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia mallei SAVP1]
 gi|124294045|gb|ABN03314.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia mallei NCTC
           10229]
 gi|126219970|gb|ABN83476.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei 668]
 gi|126227699|gb|ABN91239.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           1106a]
 gi|134247397|gb|EBA47482.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei 305]
 gi|147746496|gb|EDK53573.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia mallei FMH]
 gi|147751476|gb|EDK58543.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia mallei JHU]
 gi|157938542|gb|EDO94212.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160696686|gb|EDP86656.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia mallei ATCC
           10399]
 gi|169653348|gb|EDS86041.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei S13]
 gi|184212017|gb|EDU09060.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           1655]
 gi|217397131|gb|EEC37147.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei 576]
 gi|225933472|gb|EEH29461.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|237506058|gb|ACQ98376.1| ABC transporter, hydrophobic amino acid uptake transporter
           [Burkholderia pseudomallei MSHR346]
 gi|238525279|gb|EEP88707.1| HmgF [Burkholderia mallei GB8 horse 4]
 gi|242137992|gb|EES24394.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           1106b]
 gi|243063248|gb|EES45434.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia mallei PRL-20]
 gi|254218895|gb|EET08279.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           1710a]
          Length = 389

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 83/343 (24%), Positives = 151/343 (44%), Gaps = 17/343 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + +   ++    +       Y   +    ++YVM A GL++VVG  GLL L  +  YA
Sbjct: 25  VGILIAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAFYA 84

Query: 76  IGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           +GAY+  +L S +                 +   L++P++  ++   G+++G P+L+ RG
Sbjct: 85  VGAYTAALLSSPHLTSHFDWIAQMVPGGLHVPFLLIVPIAMALAAIFGILLGAPTLRLRG 144

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           DYLAI TL   EI +  +       N   G      +  +     +L +        +  
Sbjct: 145 DYLAIVTLGFGEIVRIFMNNLDRPVNVTNGPQGITGIDPVQVAGFNLSQTHEIFGFSLPS 204

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
               YY+ +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+ +
Sbjct: 205 VYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAMGA 264

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           +F G++GA F A +  +SP+ F F E+++V++ V+LGGM  +  +     +L    E   
Sbjct: 265 SFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLAVFPEFLR 324

Query: 300 GMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                  + L   D     +    L  +A+ +++L RS  L  
Sbjct: 325 STMSPLQHMLFGHDIVDTEVIRQALYGLAMVVIMLYRSEGLWP 367


>gi|163856636|ref|YP_001630934.1| leucine/isoleucine/valine transporter permease subunit [Bordetella
           petrii DSM 12804]
 gi|163260364|emb|CAP42666.1| high-affinity branched-chain amino acid transport system, permease
           protein [Bordetella petrii]
          Length = 411

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 98/341 (28%), Positives = 158/341 (46%), Gaps = 24/341 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L+L   +    S +    +   +LIYVM   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 86  IIALLILAAVIWPFFSGRSSVDIATLVLIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGAY 145

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L    G   W  +P +  +S   G ++G P L+ RGDYLAI TL   EI + +LI 
Sbjct: 146 TYALLYHWAGWGFWEALPFAGAMSALFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLLIN 205

Query: 140 WKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190
              IT G  GI    +    G  +         R+      +         ++Y + L +
Sbjct: 206 LNFITGGPDGISGIPKPTVFGMEMARRSSVEGARTFHEIMGWTFDNQHMVNYLYLMALAL 265

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++  +   L R  +  AW  +R+++ A  SL       KLSAF + + F G  GAFFA
Sbjct: 266 ALVTLFVSTRLIRMPVGRAWEALREDEIACRSLGLNPTRIKLSAFTLGAMFAGFGGAFFA 325

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           A +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+      Y      
Sbjct: 326 ARQGMVNPESFTFIESALILAIVVLGGMGSQVGVILAAILLTVLPEVAREFAEY------ 379

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                       +  + + L+++ R   LL ++ P   L +
Sbjct: 380 ---------RMLIFGLVMVLMMMWRPQGLLPMKRPHVELAK 411


>gi|218892965|ref|YP_002441834.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           aeruginosa LESB58]
 gi|218773193|emb|CAW29005.1| branched-chain amino acid transport protein BraE [Pseudomonas
           aeruginosa LESB58]
          Length = 417

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 102/339 (30%), Positives = 166/339 (48%), Gaps = 24/339 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            +  L++  F+    + +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 94  AILALVVVAFVWPFFASRGAVDIATLILIYVMLGIGLNIVVGLAGLLDLGYVGFYAVGAY 153

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L    G   W  +P++ M++   G ++G P L+ RGDYLAI TL   EI + +L  
Sbjct: 154 TYALLAEYAGFGFWTALPIAGMMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRN 213

Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
              IT G  GI    +    G T         ++   FF    +     I +Y V L + 
Sbjct: 214 MTEITGGPNGIGSIPKPTLFGLTFERRAPEGMQTFHEFFGIAYNTNYKVILLYVVALLLV 273

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+  +I  L R  I  AW  +R+++ A  +L       KLSAF + ++F G AG+FFAA
Sbjct: 274 LLALFVINRLMRMPIGRAWEALREDEVACRALGLNPTIVKLSAFTIGASFAGFAGSFFAA 333

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  ++P+ F F E+ ++++IV+LGGM S   +  A  +++ + E+              
Sbjct: 334 RQGLVTPESFTFIESAMILAIVVLGGMGSQLGVILAAVVMVLLQEM-------------- 379

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
               FN     +  + + ++++ R   LL ++ P   L+
Sbjct: 380 --RGFNEYRMLIFGLTMIVMMIWRPQGLLPMQRPHLELK 416


>gi|134095848|ref|YP_001100923.1| high-affinity branched-chain amino acid ABC transporter ATP-binding
           protein [Herminiimonas arsenicoxydans]
 gi|133739751|emb|CAL62802.1| Putative high-affinity branched-chain amino acid transport
           ATP-binding protein BraF [Herminiimonas arsenicoxydans]
          Length = 608

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 73/313 (23%), Positives = 138/313 (44%), Gaps = 30/313 (9%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           L    + +Y   + + +LIY + A GL+I+ G  GL+SL     +AIGAY+  +L +++G
Sbjct: 25  LPQMVANEYELRIWMLLLIYALVALGLNILTGLTGLVSLGQAGLFAIGAYTSAVLSTKFG 84

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
             +   I  + ++S A G+++  P+++ RG YL + T+    I +N+ I+W  +T G  G
Sbjct: 85  FGLGTCIVAAMILSAAFGVLLSYPTVRVRGVYLTVITIAFGIIVENVAIEWSSLTGGPNG 144

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           I         G  +                    +YVL  +  L+  +   L ++    A
Sbjct: 145 ISSIPTPTMFGLPLEDTK---------------FFYVLAILFLLAFLLHYNLIKSRFGRA 189

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R +  ++ A  ++    I  ++ +F +++AF G AGA +A     ++PD F+F +++  
Sbjct: 190 MRAVSQSETAARTVGINPIVMRMMSFVIAAAFAGAAGATYAFLNQYVNPDTFRFDDSVRF 249

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           + +VILGG  ++   A    IL  + E                             + L 
Sbjct: 250 LLMVILGGSGTVIGPALGATILTFIPEYLQSFGE---------------WQRFAYGVLLA 294

Query: 330 LVILMRSHSLLRL 342
           LV+      ++  
Sbjct: 295 LVMFGMPMGIVGT 307


>gi|224825879|ref|ZP_03698983.1| inner-membrane translocator [Lutiella nitroferrum 2002]
 gi|224602103|gb|EEG08282.1| inner-membrane translocator [Lutiella nitroferrum 2002]
          Length = 361

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 85/353 (24%), Positives = 156/353 (44%), Gaps = 4/353 (1%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M++   +L+   K+   L     L +  F+           +    L+YVM A GL+IVV
Sbjct: 3   MALEMNKLDTNKKVGLFLVSAIVLAVLPFVVGGLLGNSWLRIIDFALLYVMLALGLNIVV 62

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           G  GLL L  +  YA+GAY++ +LGS +    L  ++ IP+ A+++   G+++G P L+ 
Sbjct: 63  GFAGLLDLGFIAFYAVGAYTFALLGSPHFDIHLPFYITIPLGALVAAFFGILLGTPVLRL 122

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           +GDYLAI TL   EI +  +       N   G    + +  +     S  +         
Sbjct: 123 KGDYLAIVTLGFGEIVRIFMNNLNAPINITNGPQGINLIDPVKIGGLSFGKPLEIAGHSF 182

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY  L +  L   +   L+ + I  AW  +R++  A  ++   I   KL AF++
Sbjct: 183 NSVYLYYYFFLALTVLVVIMAWRLQHSRIGRAWVAMREDSIAAAAMGLNIRNIKLLAFSL 242

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+AG  FA+ +  ISP+ F   E+++++++++LGGM  +  +     +L    E+
Sbjct: 243 GALSGGVAGGLFASFQGFISPESFGLLESVMILAMIVLGGMGHIPGVILGAVVLTVAPEV 302

Query: 298 CCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
              +                      +  +AL +++L+R   +   +      
Sbjct: 303 LRDVIGPLQMHTFGRMLIDPENARMLIFGLALVIMMLLRPEGMWPSKRRKAEF 355


>gi|221068780|ref|ZP_03544885.1| inner-membrane translocator [Comamonas testosteroni KF-1]
 gi|220713803|gb|EED69171.1| inner-membrane translocator [Comamonas testosteroni KF-1]
          Length = 359

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 93/358 (25%), Positives = 167/358 (46%), Gaps = 18/358 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +K L  +     LL+   +       ++  +    L+YVM A GL+IVVG  GLL L 
Sbjct: 2   KNNKTLHWILGGIGLLVLPLILQYFGNAWV-RIADLALLYVMLALGLNIVVGYAGLLDLG 60

Query: 70  CVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLP 113
            V  YA+GAY + ++ S +                  SIWL+IP+  +++   G+++GLP
Sbjct: 61  YVAFYAVGAYMFALMASPHLAETFEGFVAMFPNGLHTSIWLVIPLGMLLAACTGVLLGLP 120

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
            L+ RGDYLAI TL   EI +  L       N   G     ++  +      L +     
Sbjct: 121 VLRLRGDYLAIVTLGFGEIIRIFLNNLDQPVNITNGPKGIGQIDSVKIFGFDLAKRHEIF 180

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
              +      YY+ L +   +  I   L+ + I  AW  IR+++ A  ++   +   KL 
Sbjct: 181 GYDISSVTLYYYLFLVLVLATIVICYRLQDSRIGRAWMAIREDEIAAKAMGINVRNMKLL 240

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
           AF + ++F G+AG+ FAA +  +SP+ F   E+++++++V+LGG+  +  +     +L  
Sbjct: 241 AFGMGASFGGVAGSMFAAFQGFVSPESFSLMESVMIVAMVVLGGLGHIPGVILGAVLLSA 300

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           + E+   +       +       ++    L+ +A+ +++LMR   L      +  L+R
Sbjct: 301 LPEVLRYVAGP-LQQMTDGRLDASILRQLLIALAMIVIMLMRPRGLWPTPEHAKSLDR 357


>gi|126450210|ref|YP_001079839.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein
           [Burkholderia mallei NCTC 10247]
 gi|126243080|gb|ABO06173.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia mallei NCTC
           10247]
          Length = 389

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 83/343 (24%), Positives = 150/343 (43%), Gaps = 17/343 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + +   ++    +       Y   +    ++YVM A GL++VVG  GLL L  +  YA
Sbjct: 25  VGILIAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAFYA 84

Query: 76  IGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           +GAY+  +L S +                 +   L++P++  ++   G+++G P+L+ RG
Sbjct: 85  VGAYTAALLSSPHLTSHFDWIAQMVPGGLHVPFLLIVPIAMALAAIFGILLGAPTLRLRG 144

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           DYLAI TL   EI +  +       N   G      +  +     +L +        +  
Sbjct: 145 DYLAIVTLGFGEIVRIFMNNLDRPVNVTNGPQGITGIDPVQVAGFNLSQTHEIFGFSLPS 204

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
               YY+ +    L       L+ + I  AW  IR+++ A  ++       KL AFA+ +
Sbjct: 205 VYMYYYLFVLCALLVIWACTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAMGA 264

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           +F G++GA F A +  +SP+ F F E+++V++ V+LGGM  +  +     +L    E   
Sbjct: 265 SFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLAVFPEFLR 324

Query: 300 GMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                  + L   D     +    L  +A+ +++L RS  L  
Sbjct: 325 STMSPLQHMLFGHDIVDTEVIRQALYGLAMVVIMLYRSEGLWP 367


>gi|83718822|ref|YP_441342.1| branched-chain amino acid ABC transporter permease [Burkholderia
           thailandensis E264]
 gi|167582956|ref|ZP_02375830.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis TXDOH]
 gi|167618192|ref|ZP_02386823.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis Bt4]
 gi|257139984|ref|ZP_05588246.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis E264]
 gi|83652647|gb|ABC36710.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis E264]
          Length = 389

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 83/341 (24%), Positives = 153/341 (44%), Gaps = 17/341 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +   ++    +       Y   +    ++YVM A GL++VVG  GLL L  +  YA+G
Sbjct: 27  ILIAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAFYAVG 86

Query: 78  AYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           AY+  +L S +                 +  +L++P++  ++   G+++G P+L+ RGDY
Sbjct: 87  AYTAALLSSPHLTSNFDWIAHAFPAGLHVPFFLIVPIAMALAAVFGILLGAPTLRLRGDY 146

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LAI TL   EI +  +       N   G      +  +     +L +  +     +    
Sbjct: 147 LAIVTLGFGEIVRIFMNNLDRPVNVTNGPQGITGIDPVTIAGFNLSQTHQIFGFSLPSVY 206

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             YY+ +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+ ++F
Sbjct: 207 MYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAMGASF 266

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G++GA F A +  +SP+ F F E+++V++ V+LGGM  +  +     +L    E     
Sbjct: 267 GGLSGAMFGAFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLAVFPEFLRST 326

Query: 302 NFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                + L   D     +    L  +A+ +++L RS  L  
Sbjct: 327 MSPLQHMLFGHDIVDTEVIRQALYGLAMVVIMLYRSEGLWP 367


>gi|221200421|ref|ZP_03573463.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia multivorans CGD2M]
 gi|221206101|ref|ZP_03579115.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia multivorans CGD2]
 gi|221174113|gb|EEE06546.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia multivorans CGD2]
 gi|221179762|gb|EEE12167.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia multivorans CGD2M]
          Length = 423

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 100/342 (29%), Positives = 159/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+++ LL    +      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 97  AIIWVLLAVGLVWPFVGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GL+ W  +P++A+ S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 157 YTYAMLNQYFGLTFWECLPIAAIASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 217 NLTSLTGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLLALL 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + +AF G+ GAFF
Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423


>gi|325499005|gb|EGC96864.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           fergusonii ECD227]
          Length = 425

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|73542003|ref|YP_296523.1| leucine/isoleucine/valine transporter permease subunit [Ralstonia
           eutropha JMP134]
 gi|72119416|gb|AAZ61679.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 425

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 101/342 (29%), Positives = 156/342 (45%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A V+ LL    +      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 99  AAVWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 158

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GL  W  +P++A +S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 159 YTYAMLNQYFGLGFWECLPIAAAMSATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAR 218

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
                T G  GI    +    G  +         R+               IF+Y + L 
Sbjct: 219 NLTEYTGGPDGISGIPKPTVFGFEMARSATVEGARTFHELIGLDYKGEHMVIFLYLLALL 278

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +R+++ A  SL       KLSAF + +AF G+ GAFF
Sbjct: 279 LVGFTLFVTSRLIRMPMGRAWEALREDEIACRSLGMNPTRIKLSAFTLGAAFAGIGGAFF 338

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ +V+++V+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 339 AARQGLVNPESFTFIESALVLAVVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 393

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L R
Sbjct: 394 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPR 425


>gi|319780972|ref|YP_004140448.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166860|gb|ADV10398.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 531

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 129/343 (37%), Positives = 201/343 (58%), Gaps = 8/343 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++A++  +      G   S K++D+ GIQILIYVM AWGL+IVVG  GLL L  V  Y
Sbjct: 177 ILVVAILSLMSWSFVGGLQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGYVAFY 236

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GAY+Y +LG++YGLS W+L+P +  ++   G+++G P L+ RGDYLAI TL   EI +
Sbjct: 237 AVGAYAYALLGTQYGLSFWILLPAAGAMAAFWGVLLGFPVLRLRGDYLAIVTLAFGEIIR 296

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR------FPSSFVIYEIFMYYVLL 188
            +LI W+ +TNG AGI    ++ F G    ++             +S   Y+IF+YY++L
Sbjct: 297 LVLINWREVTNGSAGISGIPKVTFFGLMTFNVSDPNYVAKVLHLATSSAYYKIFLYYLIL 356

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  L+A + + LRR  +  AW  +R+++ A  SL       KL+AFA  + F G AGAF
Sbjct: 357 ALALLTAFVTIRLRRMPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAGAF 416

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           FAA +  +SP+ F F E+ I+++IV+LGGM SL  IA A  ++IG  E    ++  +   
Sbjct: 417 FAARQGFVSPESFVFLESAIILAIVVLGGMGSLVGIAVAAMVMIGGTEALRELD--FLKQ 474

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +   D +  +    L  +A+ +V+L +    +  R P+ FL+ 
Sbjct: 475 VFGPDFTPELYRMLLFGMAMVIVMLWKPRGFVGSREPTAFLKE 517


>gi|330469207|ref|YP_004406950.1| inner-membrane translocator [Verrucosispora maris AB-18-032]
 gi|328812178|gb|AEB46350.1| inner-membrane translocator [Verrucosispora maris AB-18-032]
          Length = 369

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 81/353 (22%), Positives = 148/353 (41%), Gaps = 26/353 (7%)

Query: 7   RLNKYDKILCLLAVVYPL----LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
           R  ++  I  ++   Y L              +      +   I IYV+ A GL+IVVG 
Sbjct: 24  RWMRWAVIAAVIVFFYALPNREFYQWLGPIPTTGSNFGQVLFTISIYVLLAVGLNIVVGF 83

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSR-----YGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
            GLL L     +A+GAY+  +L S            L +PV+ +++   G+++G P+L+ 
Sbjct: 84  AGLLDLGYFGFFAVGAYTVAVLTSPSSDLKTLWPWLLALPVALVLTMISGVMLGTPTLRL 143

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL  +E+ +      + +   +    +                    P   V
Sbjct: 144 RGDYLAIVTLGFAEMIRVAATSSEFLKGQRGFNQIPHPP---------GSYSDGKPIFGV 194

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +     Y+++L +  L    +  L R+ +  AW +IR+++ A   +       KL AFA 
Sbjct: 195 LDPRPYYWLVLTLIILVVIGVRNLNRSRVGRAWISIREDEDAAQLMGVPTFKFKLWAFAS 254

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+AGA FA  ++ +S    +   +II+++ VILGG  ++        ++  ++E 
Sbjct: 255 GAFIGGLAGALFAGKQNFVSSQNLELLNSIIILAAVILGGSGNIVGAIVGGGLVAYMIER 314

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
             G+ F        F             + L ++++ R   L+  R  +   +
Sbjct: 315 FRGIEF--------FGVELYEYRFMFFGLVLVVMMIFRPQGLIPNRRRAAEFK 359


>gi|118470269|ref|YP_887560.1| branched-chain amino acid ABC transporter permease [Mycobacterium
           smegmatis str. MC2 155]
 gi|118171556|gb|ABK72452.1| branched-chain amino acid ABC transporter, permease protein
           [Mycobacterium smegmatis str. MC2 155]
          Length = 404

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 78/356 (21%), Positives = 144/356 (40%), Gaps = 23/356 (6%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R+ K+   +    ++  L LF                 Q  +  + A GL++VVG  GLL
Sbjct: 37  RVAKWAVGVIGFGLLALLPLFTPGFLNTPGISFGGTMAQFAMVAIIAIGLNVVVGQAGLL 96

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLS--------------IWLLIPVSAMISGACGMIMGL 112
            L  V  YA+GAY+  +L S                       +P++  I+   G+I+G 
Sbjct: 97  DLGYVGFYAVGAYTVALLTSPSSPWNIVGVDKFLSSDWAWLACVPLAMAITAIAGLILGT 156

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT-TVRSLIRFFR 171
           P+L+ RGDYLAI TL   EI + +      ITNG  G+          +  + + +    
Sbjct: 157 PTLRLRGDYLAIVTLGFGEIIRLMADNLSDITNGARGLNQVAYPRLGESEKLPNGVFSSG 216

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
             +    Y  + +++ L +      ++  L R+ +  AW  IR+++ A   +       K
Sbjct: 217 NSTGVANYGTWWFWLGLALIVGILLLVGNLERSRVGRAWIAIREDEDAAEVMGVNAFKFK 276

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           L AF + +A  G++GA +A     ++P  F    +++ +  V+LGG  +   +     ++
Sbjct: 277 LWAFTIGAAIGGLSGALYAGQVQYVAPQTFNIINSMLFLCAVVLGGQGNKLGVIFGAFVI 336

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
           + +     G+ F           +          +AL ++++ R   L   R    
Sbjct: 337 VYLPNRLLGVEF--------LGINLGDLKYLFFGLALVVLMIFRPQGLFPARQHLL 384


>gi|120603438|ref|YP_967838.1| inner-membrane translocator [Desulfovibrio vulgaris DP4]
 gi|120563667|gb|ABM29411.1| L-isoleucine ABC transporter membrane protein / L-valine ABC
           transporter membrane protein / L-leucine ABC transporter
           membrane protein [Desulfovibrio vulgaris DP4]
          Length = 407

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 91/326 (27%), Positives = 157/326 (48%), Gaps = 26/326 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            +  +L+   +       Y  ++ I  L+YVM   GL+IVVG  G L L  V  YA+GAY
Sbjct: 92  ALLAVLVVFAVLPMLVSTYQTNIMISALLYVMLGLGLNIVVGLSGQLVLGYVAFYAVGAY 151

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L + +GL  W ++P+   ++   G+++G P L+ +GDYLAI TL   EI + +L  
Sbjct: 152 AYALLNADFGLGFWTVLPIGGALAAVFGILLGFPVLRLKGDYLAIVTLGFGEIVRLVLEN 211

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W  +T G +GI    R              F    S      ++YY++L     +   + 
Sbjct: 212 WGSVTRGPSGISKIARPG-----------LFGMELSVSEATTYIYYLILAAVIFTIFAVG 260

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L+ + I  AW+ +R+++ A  ++   +   KL+AFA+ + + G AG  FAA    I+P 
Sbjct: 261 RLKDSRIGRAWQALREDEIACEAMGIDLTTTKLTAFALGACWAGFAGVIFAAKTTFINPA 320

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F F E+ +++++V+LGGM S   +     +LI + E     + Y               
Sbjct: 321 SFTFLESAMILAMVVLGGMGSTLGVVLGALVLILLPEYLRAFSEY--------------- 365

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTP 345
              +   A+ L+++ R   L+  R+ 
Sbjct: 366 RMLIFGAAMVLMMVFRPQGLVSCRSR 391


>gi|107025707|ref|YP_623218.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia cenocepacia AU 1054]
 gi|116693111|ref|YP_838644.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia cenocepacia HI2424]
 gi|254250055|ref|ZP_04943375.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia cenocepacia PC184]
 gi|105895081|gb|ABF78245.1| L-isoleucine ABC transporter membrane protein / L-leucine ABC
           transporter membrane protein / L-valine ABC transporter
           membrane protein [Burkholderia cenocepacia AU 1054]
 gi|116651111|gb|ABK11751.1| L-leucine ABC transporter membrane protein / L-valine ABC
           transporter membrane protein / L-isoleucine ABC
           transporter membrane protein [Burkholderia cenocepacia
           HI2424]
 gi|124876556|gb|EAY66546.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia cenocepacia PC184]
          Length = 423

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 99/342 (28%), Positives = 158/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +++ LL    +      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 97  VIIWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GLS W  +P++A+ +   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 157 YTYAMLNQYFGLSFWECLPIAAIAAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 217 NLTSLTGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLIALL 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + +AF G+ GAFF
Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423


>gi|33592399|ref|NP_880043.1| leucine/isoleucine/valine transporter permease subunit [Bordetella
           pertussis Tohama I]
 gi|33572044|emb|CAE41571.1| high-affinity branched-chain amino acid transport system, permease
           protein [Bordetella pertussis Tohama I]
 gi|332381815|gb|AEE66662.1| leucine/isoleucine/valine transporter permease subunit [Bordetella
           pertussis CS]
          Length = 412

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 100/341 (29%), Positives = 159/341 (46%), Gaps = 24/341 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V  L+    +    S +    +   +LIYVM   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 87  LVVLLIAVSVIWPFFSGRSSVDIATLVLIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGAY 146

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L    G S W  +P S  ++   G ++G P L+ RGDYLAI TL   EI + +LI 
Sbjct: 147 TYALLYHWGGWSFWEALPFSGAVAALFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLLIN 206

Query: 140 WKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190
              +T G  GI    +   LG  +         ++      +        I++Y + L +
Sbjct: 207 LNMLTGGPDGISGLPKPSVLGMEMARRASTEGGQTFHEIMGWTFQNQHMVIYLYLMALAL 266

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              +  +   L R  +  AW  +R+++ A  SL       KLSAF + + F G  GAFFA
Sbjct: 267 ALATLFVSTRLIRMPVGRAWEALREDEIACRSLGLNPTRIKLSAFTLGAMFAGFGGAFFA 326

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           A +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + EL      Y      
Sbjct: 327 ARQGMVNPESFTFIESALILAIVVLGGMGSQIGVILAAILLTVLPELAREFAEY------ 380

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                       +  + + L+++ R   LL ++ P   L +
Sbjct: 381 ---------RMLMFGLVMVLMMMWRPQGLLPMKRPHVELRK 412


>gi|194431036|ref|ZP_03063329.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Shigella dysenteriae 1012]
 gi|194420491|gb|EDX36567.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Shigella dysenteriae 1012]
 gi|332086015|gb|EGI91179.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Shigella dysenteriae 155-74]
          Length = 425

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E   V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAEPAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|258653227|ref|YP_003202383.1| inner-membrane translocator [Nakamurella multipartita DSM 44233]
 gi|258556452|gb|ACV79394.1| inner-membrane translocator [Nakamurella multipartita DSM 44233]
          Length = 408

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 80/360 (22%), Positives = 150/360 (41%), Gaps = 17/360 (4%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R+ ++   +  + ++  L L      T       ++  Q  +Y + A GL++VVG  GLL
Sbjct: 28  RVTQWAFGVPFILLIAVLPLLNIPLLTTQGTNFGAVMAQFGMYALIAIGLNVVVGQAGLL 87

Query: 67  SLNCVIAYAIGAYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMGL 112
            L  V  YA+GAY+  +L S                  +    +P++ MI+   G+I+G 
Sbjct: 88  DLGYVGFYAVGAYTVALLTSPASPWNQTGPGGWLSTDWAWLACLPIAIMITAISGLILGS 147

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF-R 171
           P+L+ RGDYLAI TL   EI + +      IT G  G+       F  +    L  F   
Sbjct: 148 PTLRLRGDYLAIVTLGFGEIVRLLADNLIEITGGGRGLAQVAYPRFGTSESNPLGVFSAG 207

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
             S  +   ++ +++ + +  +    +  L R+ +  AW  IR+++ A   +       K
Sbjct: 208 NVSGTLNSGVWWFWLSIVLIVIVLIFVGNLERSRVGRAWVAIREDEDAAEIMGVPTFKFK 267

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           L AF + +   GM+GA +A     + P  F    +++ +  V+LGG  +   +     I+
Sbjct: 268 LWAFVIGAGIGGMSGALYAGQVQFVVPTNFNVINSVLFLCAVVLGGQGNKLGVILGAFII 327

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           + +      +       +     +          +AL ++++ R   L+ +R       R
Sbjct: 328 VYLPNFF--LGRDEILGIPIDGDAIAQYKYLFFGLALMVLMIFRPQGLIPVRQKLLTYGR 385


>gi|206564084|ref|YP_002234847.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia cenocepacia J2315]
 gi|198040124|emb|CAR56106.1| putative amino acid transport system permease component of ABC
           transporter protein [Burkholderia cenocepacia J2315]
          Length = 423

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 99/342 (28%), Positives = 158/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +++ LL    +      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 97  VIIWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GLS W  +P++A+ +   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 157 YTYAMLNQYFGLSFWECLPIAAIAAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 217 NLTSLTGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLIALL 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + +AF G+ GAFF
Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423


>gi|167561874|ref|ZP_02354790.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia oklahomensis
           EO147]
 gi|167569095|ref|ZP_02361969.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia oklahomensis
           C6786]
          Length = 388

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 84/345 (24%), Positives = 151/345 (43%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   +     ++    L       Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  VTVGVLTAALVVAAPLLIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                 +  +L++P++   +   G+++G P+L+ 
Sbjct: 83  YAVGAYTAALLSSPHLTSHFDWIAQLVPGGLHVPFFLIVPIAMAFAAFFGILLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +     +L +        +
Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNVTNGPQGITGIDPVTVAGFNLSQTHEIFGFSL 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA F A +  +SP+ F F E+++V++ V+LGGM  +  +     +L    E 
Sbjct: 263 GASFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLAVFPEF 322

Query: 298 CCGMNFYYFNSLLKFD-CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    + L   D     +    L  +A+ L++L RS  +  
Sbjct: 323 LRSTMSPLQHMLFGHDVIDTEVIRQGLYGLAMVLIMLYRSEGIWP 367


>gi|78061503|ref|YP_371411.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia sp. 383]
 gi|77969388|gb|ABB10767.1| L-leucine ABC transporter membrane protein / L-valine ABC
           transporter membrane protein / L-isoleucine ABC
           transporter membrane protein [Burkholderia sp. 383]
          Length = 423

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 99/342 (28%), Positives = 159/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +++ +L   F+      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 97  VIIWVMLAIGFVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GLS W  +P++A+ +   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 157 YTYAMLNQYFGLSFWECLPIAAIAAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 217 NLTSLTGGPDGISSIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLIALV 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + +AF G+ GAFF
Sbjct: 277 LVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423


>gi|161520174|ref|YP_001583601.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189353647|ref|YP_001949274.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia multivorans ATCC 17616]
 gi|160344224|gb|ABX17309.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
 gi|189337669|dbj|BAG46738.1| branched-chain amino acid transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 423

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 100/342 (29%), Positives = 159/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+++ LL    +      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 97  AIIWVLLAVGLVWPFVGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GL+ W  +P++A+ S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 157 YTYAMLNQYFGLTFWECLPIAAIASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 217 NLTSLTGGPDGISGIPKPTVFGFEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLLALL 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + +AF G+ GAFF
Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423


>gi|167035910|ref|YP_001671141.1| inner-membrane translocator [Pseudomonas putida GB-1]
 gi|166862398|gb|ABZ00806.1| inner-membrane translocator [Pseudomonas putida GB-1]
          Length = 433

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 99/329 (30%), Positives = 158/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 106 IIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 165

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 166 GLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 225

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+      +F     R        +  FF F  +  +  +F+Y VL  +  
Sbjct: 226 WLSFTGGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNANLKFVFIYAVLFLVVL 285

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  +  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA  
Sbjct: 286 AVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATY 345

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 346 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 397

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  + + L+++ R   L+R
Sbjct: 398 -------RVLLFGVLMVLMMIWRPRGLIR 419


>gi|311277621|ref|YP_003939852.1| inner-membrane translocator [Enterobacter cloacae SCF1]
 gi|308746816|gb|ADO46568.1| inner-membrane translocator [Enterobacter cloacae SCF1]
          Length = 425

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 99/341 (29%), Positives = 161/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  LL+          +    +    +IY++   GL++VVG  GLL L     YAIGA
Sbjct: 91  LFLIALLVIAVAWPFMVSRGAVDIATMTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YGL  W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI---------FMYYVLLG 189
               +T G  GI    +    G       R   + +    + +         F+Y V L 
Sbjct: 211 NNTEVTGGPNGISQIPKPTLFGLEFSRTAREGGWDTFSNFFNVKYDPNDRVVFLYLVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 271 LVVATLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F+E+  V++IV+LGGM S   +  A  +L+   EL   +N Y     
Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        ++   + L+++ R   LL +      L+
Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRVQLKLK 416


>gi|221209454|ref|ZP_03582435.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia multivorans CGD1]
 gi|221170142|gb|EEE02608.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia multivorans CGD1]
          Length = 423

 Score =  133 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 100/342 (29%), Positives = 159/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+++ LL    +      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 97  AIIWVLLAVGLVWPFVGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 156

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GL+ W  +P++A+ S   G ++G P L+ RGDYLAI TL   EI + +  
Sbjct: 157 YTYAMLNQYFGLTFWECLPIAAIASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLAN 216

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G  +          +         S     IF+Y + L 
Sbjct: 217 NLTSLTGGPDGISGIPKPTVFGFEMARTASVEGAKTFHELIGLEYSGEHMVIFLYLLALL 276

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + +AF G+ GAFF
Sbjct: 277 LVGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFF 336

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y     
Sbjct: 337 AARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY----- 391

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL    P   L +
Sbjct: 392 ----------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 423


>gi|187478386|ref|YP_786410.1| leucine/isoleucine/valine transporter permease subunit [Bordetella
           avium 197N]
 gi|115422972|emb|CAJ49502.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Bordetella avium 197N]
          Length = 413

 Score =  133 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 103/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +   LLL   +    + +    +   +LIYVM   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 88  LFMLLLLAALIWPFFAGRSSVDIATLVLIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGAY 147

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L    G   W  +P+S  ++   G I+G P L+ RGDYLAI TL   EI + +LI 
Sbjct: 148 TYALLYHWAGWGFWEALPMSGAMAAVFGFILGFPVLRLRGDYLAIVTLGFGEIIRLLLIN 207

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLGM 190
              +T G  GI    +  F G  +          +   FF F        I++Y + L +
Sbjct: 208 LSSVTGGPDGISGIPKPTFFGLELTRRASQEGTQTFHEFFGFTFQNQHMVIYLYLMALAL 267

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++  +   L R  +  AW  +R+++ A  SL       KLSAF + + F G  GAFFA
Sbjct: 268 ALITLFVSTRLIRMPVGRAWEALREDEIACRSLGLNPTRIKLSAFTLGAMFAGFGGAFFA 327

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           A +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+      Y      
Sbjct: 328 ARQGMVNPESFTFIESALILAIVVLGGMGSQIGVILAAILLTVLPEVAREFAEY------ 381

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                       L  + + L+++ R   LL ++ P   L +
Sbjct: 382 ---------RMLLFGLVMVLMMMWRPQGLLPMKRPHVELGK 413


>gi|46578964|ref|YP_009772.1| high-affinity branched-chain amino acid ABC transporter permease
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|46448377|gb|AAS95031.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|311232819|gb|ADP85673.1| inner-membrane translocator [Desulfovibrio vulgaris RCH1]
          Length = 407

 Score =  133 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 91/326 (27%), Positives = 157/326 (48%), Gaps = 26/326 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            +  +L+   +       Y  ++ I  L+YVM   GL+IVVG  G L L  V  YA+GAY
Sbjct: 92  ALLAVLVVFAVLPMLVSTYQTNIMISALLYVMLGLGLNIVVGLSGQLVLGYVAFYAVGAY 151

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L + +GL  W ++P+   ++   G+++G P L+ +GDYLAI TL   EI + +L  
Sbjct: 152 AYALLNADFGLGFWTVLPIGGALAAVFGILLGFPVLRLKGDYLAIVTLGFGEIVRLVLEN 211

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W  +T G +GI    R              F    S      ++YY++L     +   + 
Sbjct: 212 WGSVTRGPSGISKIARPG-----------LFGMELSVSEATTYIYYLILAAVIFTIFAVG 260

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L+ + I  AW+ +R+++ A  ++   +   KL+AFA+ + + G AG  FAA    I+P 
Sbjct: 261 RLKDSRIGRAWQALREDEIACEAMGIDLTTTKLTAFALGACWAGFAGVIFAAKTTFINPA 320

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F F E+ +++++V+LGGM S   +     +LI + E     + Y               
Sbjct: 321 SFTFLESAMILAMVVLGGMGSTLGVVLGALVLILLPEYLRAFSEY--------------- 365

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTP 345
              +   A+ L+++ R   L+  R+ 
Sbjct: 366 RMLIFGAAMVLMMVFRPQGLVSCRSR 391


>gi|215488731|ref|YP_002331162.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli O127:H6 str. E2348/69]
 gi|312968233|ref|ZP_07782443.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Escherichia coli 2362-75]
 gi|215266803|emb|CAS11244.1| high-affinity branched-chain amino acid transport; membrane
           component of ABC superfamily [Escherichia coli O127:H6
           str. E2348/69]
 gi|312287058|gb|EFR14968.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Escherichia coli 2362-75]
          Length = 425

 Score =  133 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVALSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|256379541|ref|YP_003103201.1| inner-membrane translocator [Actinosynnema mirum DSM 43827]
 gi|255923844|gb|ACU39355.1| inner-membrane translocator [Actinosynnema mirum DSM 43827]
          Length = 385

 Score =  133 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 82/345 (23%), Positives = 140/345 (40%), Gaps = 18/345 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGI-QILIYVMFAWGLSIVVGSLGLL 66
             +Y   L  +     L                ++ I  + +Y++ A GL+IVVG  GLL
Sbjct: 33  WQRYLVYLAAIGFALILPAPWIGSFMSPGADWTTVLIYPVGVYILLAVGLNIVVGQAGLL 92

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L  V  +A+G YS    G++YG + W  I +   ++   G+++G P+L+ RGDYLAI T
Sbjct: 93  DLGFVAFFAMGGYSVAYFGTQYGWNYWATIVIGIGLAAVSGVVLGAPTLRLRGDYLAIVT 152

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI +        I  G  GI        +                F +     YY+
Sbjct: 153 LGFGEIVRITANNTDEI-GGARGITNIPHPPDM------------LGLEFRLDPAPYYYL 199

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           ++    +     + L+++ +  AW  IR+++ A   +       KL AFA+ +   G+AG
Sbjct: 200 MVAAIAVVIVFSVRLQKSRVGRAWAAIREDEDAAELMGVPTFKFKLLAFAIGAMIGGLAG 259

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
              A     I P+ F F  +  +++ V+LGG  +L  +     ++  + E    +N+   
Sbjct: 260 GLHAGKAVFIEPNTFPFILSATILAAVVLGGSGNLPGVMLGAFVIAWLPERFREVNWLED 319

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                     +     L    L L++ +R   LL  R     L  
Sbjct: 320 L----LGRDPSEYRILLFGGVLVLMMGLRPEGLLPSRRRKAELHE 360


>gi|293412876|ref|ZP_06655544.1| livM [Escherichia coli B354]
 gi|291468523|gb|EFF11016.1| livM [Escherichia coli B354]
          Length = 425

 Score =  133 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|157162932|ref|YP_001460250.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli HS]
 gi|170018312|ref|YP_001723266.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli ATCC 8739]
 gi|188492137|ref|ZP_02999407.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli 53638]
 gi|254038623|ref|ZP_04872679.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           sp. 1_1_43]
 gi|300917214|ref|ZP_07133895.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 115-1]
 gi|312972280|ref|ZP_07786454.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Escherichia coli 1827-70]
 gi|157068612|gb|ABV07867.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli HS]
 gi|169753240|gb|ACA75939.1| inner-membrane translocator [Escherichia coli ATCC 8739]
 gi|188487336|gb|EDU62439.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli 53638]
 gi|226839129|gb|EEH71152.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           sp. 1_1_43]
 gi|300415497|gb|EFJ98807.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 115-1]
 gi|309703862|emb|CBJ03203.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Escherichia coli ETEC H10407]
 gi|310334657|gb|EFQ00862.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Escherichia coli 1827-70]
 gi|323934558|gb|EGB30958.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli E1520]
 gi|323939326|gb|EGB35537.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli E482]
 gi|332345410|gb|AEE58744.1| high-affinity branched-chain amino acid transport ATP-binding
           protein LivM [Escherichia coli UMNK88]
          Length = 425

 Score =  133 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|264677026|ref|YP_003276932.1| High-affinity branched-chain amino acidtransporter permease livM
           [Comamonas testosteroni CNB-2]
 gi|299532554|ref|ZP_07045944.1| High-affinity branched-chain amino acidtransport system permease
           protein livM [Comamonas testosteroni S44]
 gi|262207538|gb|ACY31636.1| High-affinity branched-chain amino acidtransport system permease
           protein livM [Comamonas testosteroni CNB-2]
 gi|298719501|gb|EFI60468.1| High-affinity branched-chain amino acidtransport system permease
           protein livM [Comamonas testosteroni S44]
          Length = 359

 Score =  133 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 92/358 (25%), Positives = 166/358 (46%), Gaps = 18/358 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +K L  +     LL+   +       ++  +    L+YVM A GL+IVVG  GLL L 
Sbjct: 2   KNNKTLHWILGGIGLLVLPLILQYFGNAWV-RIADLALLYVMLALGLNIVVGYAGLLDLG 60

Query: 70  CVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLP 113
            V  YA+GAY + ++ S +                  SIWL+IP+  +++   G+++GLP
Sbjct: 61  YVAFYAVGAYMFALMASPHLAETFEGFVAMFPNGLHTSIWLVIPLGMLLAACTGVLLGLP 120

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
            L+ RGDYLAI TL   EI +  L       N   G     ++  +      L +     
Sbjct: 121 VLRLRGDYLAIVTLGFGEIIRIFLNNLDQPVNITNGPKGIGQIDSVKIFGFDLAKRHEIF 180

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
              +      YY+ L +   +  I   L+ + I  AW  IR+++ A  ++   +   KL 
Sbjct: 181 GYDIASVTLYYYLFLVLVLATIVICYRLQDSRIGRAWMAIREDEIAAKAMGINVRNMKLL 240

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
           AF + ++F G+AG+ F A +  +SP+ F   E+++++++V+LGG+  +  +     +L  
Sbjct: 241 AFGMGASFGGVAGSMFGAFQGFVSPESFSLMESVMIVAMVVLGGLGHIPGVILGAVLLSA 300

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           + E+   +       +       ++    L+ +A+ +++LMR   L      +  L+R
Sbjct: 301 LPEVLRYVAGP-LQQMTDGRLDASILRQLLIALAMIVIMLMRPRGLWPTPEHAKSLDR 357


>gi|209517437|ref|ZP_03266278.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209502091|gb|EEA02106.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 389

 Score =  133 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 85/345 (24%), Positives = 153/345 (44%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +     ++    +       Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  LIVGVITTIFVIAAPMVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFCGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YAIGAY+  +L S +                 + IW+++P++  ++   G+++G P+L+ 
Sbjct: 83  YAIGAYTAALLSSPHLSTQFEWIAHLAPHGLNVPIWIIVPIAMALAAVFGILLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +     SL +         
Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGINPVQVGGFSLAQSHSLFGFQF 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    L       L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PAVYGYYYLFVLCALLVIWTCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA FA+ +  +SP+ F F E+++V++ V+LGGM  +  +     +L    E 
Sbjct: 263 GASFGGLSGAMFASFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLAVFPEF 322

Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                    N +   +     +    L  +A+ +++L RS  L  
Sbjct: 323 LRSTMGPLQNMIFGHEIVDTEVIRQLLYGLAMVVIMLYRSEGLWP 367


>gi|330984535|gb|EGH82638.1| high-affinity branched-chain amino acid ABC transporter permease
           BraE [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 437

 Score =  133 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KYI ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W  +P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +F     R        +  +F F  +  +  +F+Y VL  +  
Sbjct: 224 WLSFTGGPNGVPVPSPTFFGLEFGRRAKDGGIPIHEYFGFDYNPDLKFLFIYTVLFLVVL 283

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 395

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  I + L+++ R   L+R
Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417


>gi|191167323|ref|ZP_03029140.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli B7A]
 gi|218556005|ref|YP_002388918.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli IAI1]
 gi|218697139|ref|YP_002404806.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli 55989]
 gi|300815342|ref|ZP_07095567.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 107-1]
 gi|190902675|gb|EDV62407.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli B7A]
 gi|218353871|emb|CAV00259.1| leucine/isoleucine/valine transporter subunit ; membrane component
           of ABC superfamily [Escherichia coli 55989]
 gi|218362773|emb|CAR00399.1| leucine/isoleucine/valine transporter subunit ; membrane component
           of ABC superfamily [Escherichia coli IAI1]
 gi|300532234|gb|EFK53296.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 107-1]
 gi|323182920|gb|EFZ68321.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Escherichia coli 1357]
 gi|324116346|gb|EGC10265.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli E1167]
          Length = 425

 Score =  133 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|331655036|ref|ZP_08356035.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Escherichia coli M718]
 gi|331047051|gb|EGI19129.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Escherichia coli M718]
          Length = 425

 Score =  133 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGVMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|301018540|ref|ZP_07182918.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 69-1]
 gi|300399659|gb|EFJ83197.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 69-1]
          Length = 425

 Score =  133 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|218550718|ref|YP_002384509.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           fergusonii ATCC 35469]
 gi|218358259|emb|CAQ90906.1| leucine/isoleucine/valine transporter subunit ; membrane component
           of ABC superfamily [Escherichia fergusonii ATCC 35469]
          Length = 425

 Score =  133 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|209886583|ref|YP_002290440.1| ABC branched chain amino acid family transporter [Oligotropha
           carboxidovorans OM5]
 gi|209874779|gb|ACI94575.1| ABC branched chain amino acid family transporter [Oligotropha
           carboxidovorans OM5]
          Length = 599

 Score =  133 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 72/311 (23%), Positives = 128/311 (41%), Gaps = 30/311 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
            T   +Y   + +   IY + A GL+++VG  GL+SL     +A+GAY+  IL +R G  
Sbjct: 23  FTADNEYSLRLFMLFAIYAIVALGLNVLVGLAGLISLGQAGLFALGAYTGAILATRLGWD 82

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
                    +++GA G ++  P+++ RG YLA+ T+    I +N++I+W  +T G  GI 
Sbjct: 83  FIFAAMAGTVVAGAFGALLAYPTVRVRGVYLAVITIAFGLIVENVIIEWDHLTGGTTGIS 142

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              +    G  +                    Y VL  + FL   I   ++++    A  
Sbjct: 143 SIPKPALFGWPLDGFRY---------------YAVLAVLLFLVVVITHNIKQSRYGRAML 187

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +  ++ A   +       +  AF ++S+  G+AG  +A     ISPD F F+++I  + 
Sbjct: 188 AVSQSETAARGVGLNATGVRTLAFVIASSTAGLAGVLYAYLNLYISPDSFTFNDSIRFLL 247

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +V+LGG  +         IL  + E                             + L LV
Sbjct: 248 MVVLGGAGTTVGALIGALILTYLPEY---------------LQQLQYWQQFAYGLLLALV 292

Query: 332 ILMRSHSLLRL 342
           + +    +   
Sbjct: 293 MFVLPQGIFGT 303


>gi|157158767|ref|YP_001464918.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli E24377A]
 gi|157080797|gb|ABV20505.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli E24377A]
          Length = 425

 Score =  133 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|83644112|ref|YP_432547.1| leucine/isoleucine/valine transporter permease subunit [Hahella
           chejuensis KCTC 2396]
 gi|83632155|gb|ABC28122.1| ABC-type branched-chain amino acid transport system, permease
           component [Hahella chejuensis KCTC 2396]
          Length = 431

 Score =  133 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 100/352 (28%), Positives = 161/352 (45%), Gaps = 34/352 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
                LL+   L    + +    +    LIYV+   GL+IVVG  GLL L  V  YA+GA
Sbjct: 94  VFFVALLIAAILIPFNTGRIWSDIATLALIYVILGLGLNIVVGLAGLLDLGYVAFYAVGA 153

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           YSY +L   +GLS W+ +P+ A+++   G ++G P L+ RGDYLAI TL   EI + +L 
Sbjct: 154 YSYALLSQYFGLSFWVCLPIGALLAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLN 213

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVR-------------------SLIRFFRFPSSFVIY 179
               +T G  GI    +                                FF  P    + 
Sbjct: 214 NLTSLTGGPNGIGGIPKPTIPMIQTNPEVAVVNLEFSRRASEGNVPYHEFFGVPYDSSLK 273

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
            + +Y + L +   +  I+  L R  +  AW  +R+++ A  SL       KLSAF + +
Sbjct: 274 VVVLYLIALALALATILIVRRLIRMPVGRAWEALREDEIACRSLGLNRTAIKLSAFTIGA 333

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           AF G AG+ + A +  ISP+ F F E++I+++IV+LGGM S   +  A  +++ + EL  
Sbjct: 334 AFAGFAGSLYGARQGHISPESFVFMESVIILAIVVLGGMGSQIGVMIAAVLVVLLQELTR 393

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           G   Y                     + + L+++     L+ ++ P   L++
Sbjct: 394 GFEEY---------------RMLAFGMIMVLMMIWCPQGLIPMKRPHLQLKQ 430


>gi|150017620|ref|YP_001309874.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052]
 gi|149904085|gb|ABR34918.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052]
          Length = 350

 Score =  133 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 84/347 (24%), Positives = 152/347 (43%), Gaps = 38/347 (10%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           +S+      +Y     +LA++Y  L+FL         YI  +  QI I+++ A GL++++
Sbjct: 16  LSLVKTTYTRYMITTVVLALIYVFLMFLVNQGIIGD-YILRIMKQIGIFLIAALGLNLIL 74

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G  ++      +IGAY   I+   + +   + + V  +++G    ++G P L+ +GD
Sbjct: 75  GFTGQFTMGHAAFMSIGAYGSAIMTKNFNMPFPIALLVGIILAGILAALIGYPILRLKGD 134

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLAI TL   EI + ++     +  G  GI                              
Sbjct: 135 YLAICTLGFGEIVKVVIQNVDYV-GGARGISGIPGST----------------------- 170

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
              + ++L    L  +I+  L  ++   A  +IR+++ A  ++       K+ AF + S+
Sbjct: 171 --SFLIVLIGVALCYAILKNLIHSSKGRAIMSIREDEIAAEAMGINSTKYKMIAFIIGSS 228

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             G+AG  +A     I P  F FS++I +I+ V+LGGM SLS     T+ILI + E   G
Sbjct: 229 MAGLAGGLYAHFNSFIDPASFAFSKSIELITYVVLGGMGSLSGTVIGTSILIYLPECLRG 288

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
           ++             F      +  + L L+++ R   +L  R  + 
Sbjct: 289 LSE-----------VFKTYRILIYAVMLVLMMIFRPQGILGTREITV 324


>gi|16131328|ref|NP_417913.1| leucine/isoleucine/valine transporter subunit [Escherichia coli
           str. K-12 substr. MG1655]
 gi|89110556|ref|AP_004336.1| leucine/isoleucine/valine transporter subunit [Escherichia coli
           str. K-12 substr. W3110]
 gi|170082970|ref|YP_001732290.1| leucine/isoleucine/valine ABC transporter membrane component
           [Escherichia coli str. K-12 substr. DH10B]
 gi|238902547|ref|YP_002928343.1| leucine/isoleucine/valine transporter subunit [Escherichia coli
           BW2952]
 gi|253771715|ref|YP_003034546.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli 'BL21-Gold(DE3)pLysS AG']
 gi|301021803|ref|ZP_07185767.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 196-1]
 gi|301645897|ref|ZP_07245811.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 146-1]
 gi|307140138|ref|ZP_07499494.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli H736]
 gi|331644154|ref|ZP_08345283.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Escherichia coli H736]
 gi|585411|sp|P22729|LIVM_ECOLI RecName: Full=High-affinity branched-chain amino acid transport
           system permease protein livM; AltName: Full=LIV-I
           protein M
 gi|466592|gb|AAB18431.1| CG Site No. 18190 [Escherichia coli str. K-12 substr. MG1655]
 gi|1789865|gb|AAC76481.1| leucine/isoleucine/valine transporter subunit [Escherichia coli
           str. K-12 substr. MG1655]
 gi|85676587|dbj|BAE77837.1| leucine/isoleucine/valine transporter subunit [Escherichia coli
           str. K12 substr. W3110]
 gi|169890805|gb|ACB04512.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238861639|gb|ACR63637.1| leucine/isoleucine/valine transporter subunit [Escherichia coli
           BW2952]
 gi|253322759|gb|ACT27361.1| inner-membrane translocator [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|260447528|gb|ACX37950.1| inner-membrane translocator [Escherichia coli DH1]
 gi|299881436|gb|EFI89647.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 196-1]
 gi|301075886|gb|EFK90692.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 146-1]
 gi|315138030|dbj|BAJ45189.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli DH1]
 gi|315614724|gb|EFU95364.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Escherichia coli 3431]
 gi|331036448|gb|EGI08674.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Escherichia coli H736]
          Length = 425

 Score =  133 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|257095155|ref|YP_003168796.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257047679|gb|ACV36867.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 358

 Score =  132 bits (332), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 92/343 (26%), Positives = 156/343 (45%), Gaps = 4/343 (1%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + +    L ++  +LL +   A    +    +    ++YV  A GL+IVVG  GLL L  
Sbjct: 11  WQQHWLGLVLIGVVLLAVPFVAALGGQAWVRIANFAILYVFLALGLNIVVGYAGLLDLGY 70

Query: 71  VIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           V  YA+GAY+Y +L S +    L  W+++PV A ++   G+++G P+LK RGDYLAI TL
Sbjct: 71  VAFYAVGAYAYALLASPHFGIHLPFWVILPVGAGLACIFGVLLGAPTLKLRGDYLAIVTL 130

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              EI +  +       N   G      +  +     S           V      Y++L
Sbjct: 131 GFGEIIRIFMNNLNAPINVTNGAQGITLIDPIRIGGFSFADTSTILGVTVSGPQKYYFLL 190

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +  +   I + L+ + I  AW+ IR+++ A  +        KL AFA+ ++F G+AG 
Sbjct: 191 VTLAIMIIMINVRLQDSRIGRAWQAIREDEVAAKACGINTRNIKLLAFAMGASFGGVAGG 250

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            F+A +  +SP+ F   E+I ++++V+LGGM  +  +     +L G+ E           
Sbjct: 251 VFSAMQGFVSPESFSLMESITILAMVVLGGMGHIPGVILGAVLLTGLPEALRYGIEPLQR 310

Query: 308 SLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
           ++              +  +AL LV+  R   L         L
Sbjct: 311 AIFGRMIIDPESLRMLVFGLALVLVMRFRPAGLWPSSQRRREL 353


>gi|300946797|ref|ZP_07161041.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 116-1]
 gi|300956790|ref|ZP_07169057.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 175-1]
 gi|300316429|gb|EFJ66213.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 175-1]
 gi|300453554|gb|EFK17174.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 116-1]
          Length = 425

 Score =  132 bits (332), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|323966120|gb|EGB61557.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli M863]
 gi|323974903|gb|EGB70014.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli TW10509]
 gi|324111777|gb|EGC05757.1| branched-chain amino acid transport system/permease component
           protein [Escherichia fergusonii B253]
 gi|327251090|gb|EGE62783.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Escherichia coli STEC_7v]
          Length = 425

 Score =  132 bits (332), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|26250068|ref|NP_756108.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli CFT073]
 gi|110643696|ref|YP_671426.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli 536]
 gi|227883600|ref|ZP_04001405.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli 83972]
 gi|300985254|ref|ZP_07177351.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 45-1]
 gi|300987352|ref|ZP_07178160.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 200-1]
 gi|301050321|ref|ZP_07197210.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 185-1]
 gi|331659751|ref|ZP_08360689.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Escherichia coli TA206]
 gi|26110497|gb|AAN82682.1|AE016768_100 High-affinity branched-chain amino acid transport system permease
           protein livM [Escherichia coli CFT073]
 gi|110345288|gb|ABG71525.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Escherichia coli 536]
 gi|227839479|gb|EEJ49945.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli 83972]
 gi|281180483|dbj|BAI56813.1| leucine ABC transporter ABC transporter permease component
           [Escherichia coli SE15]
 gi|300297950|gb|EFJ54335.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 185-1]
 gi|300306220|gb|EFJ60740.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 200-1]
 gi|300408125|gb|EFJ91663.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 45-1]
 gi|307555550|gb|ADN48325.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Escherichia coli ABU 83972]
 gi|315291692|gb|EFU51048.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 153-1]
 gi|315295976|gb|EFU55285.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 16-3]
 gi|324009341|gb|EGB78560.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 57-2]
 gi|324014551|gb|EGB83770.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 60-1]
 gi|331052966|gb|EGI24999.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Escherichia coli TA206]
          Length = 425

 Score =  132 bits (332), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|91212937|ref|YP_542923.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli UTI89]
 gi|117625728|ref|YP_859051.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli APEC O1]
 gi|218560518|ref|YP_002393431.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli S88]
 gi|218691741|ref|YP_002399953.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli ED1a]
 gi|237703195|ref|ZP_04533676.1| leucine/isoleucine/valine transporter subunit LivM [Escherichia sp.
           3_2_53FAA]
 gi|306816201|ref|ZP_07450339.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli NC101]
 gi|91074511|gb|ABE09392.1| high-affinity branched-chain amino acid transport system permease
           protein livM [Escherichia coli UTI89]
 gi|115514852|gb|ABJ02927.1| leucine/isoleucine/valine transporter subunit LivM [Escherichia
           coli APEC O1]
 gi|218367287|emb|CAR05065.1| leucine/isoleucine/valine transporter subunit ; membrane component
           of ABC superfamily [Escherichia coli S88]
 gi|218429305|emb|CAR10265.2| leucine/isoleucine/valine transporter subunit ; membrane component
           of ABC superfamily [Escherichia coli ED1a]
 gi|226902459|gb|EEH88718.1| leucine/isoleucine/valine transporter subunit LivM [Escherichia sp.
           3_2_53FAA]
 gi|294490164|gb|ADE88920.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli IHE3034]
 gi|305850597|gb|EFM51054.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli NC101]
 gi|307628522|gb|ADN72826.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli UM146]
 gi|315286141|gb|EFU45579.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 110-3]
 gi|320194043|gb|EFW68676.1| Branched-chain amino acid transport system permease protein LivM
           [Escherichia coli WV_060327]
 gi|323950118|gb|EGB46001.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H252]
 gi|323954600|gb|EGB50382.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H263]
          Length = 425

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|15803966|ref|NP_290002.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli O157:H7 EDL933]
 gi|15833557|ref|NP_312330.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli O157:H7 str. Sakai]
 gi|82545817|ref|YP_409764.1| leucine/isoleucine/valine transporter permease subunit [Shigella
           boydii Sb227]
 gi|168747054|ref|ZP_02772076.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC4113]
 gi|168753220|ref|ZP_02778227.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC4401]
 gi|168759490|ref|ZP_02784497.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC4501]
 gi|168765815|ref|ZP_02790822.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC4486]
 gi|168772639|ref|ZP_02797646.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC4196]
 gi|168779551|ref|ZP_02804558.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC4076]
 gi|168785273|ref|ZP_02810280.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC869]
 gi|168797238|ref|ZP_02822245.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC508]
 gi|187732154|ref|YP_001882157.1| leucine/isoleucine/valine transporter permease subunit [Shigella
           boydii CDC 3083-94]
 gi|194435868|ref|ZP_03067971.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli 101-1]
 gi|195934948|ref|ZP_03080330.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli O157:H7 str. EC4024]
 gi|208807569|ref|ZP_03249906.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC4206]
 gi|208812062|ref|ZP_03253391.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC4045]
 gi|208820990|ref|ZP_03261310.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC4042]
 gi|209396049|ref|YP_002272897.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC4115]
 gi|209920913|ref|YP_002294997.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli SE11]
 gi|217324626|ref|ZP_03440710.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. TW14588]
 gi|218707050|ref|YP_002414569.1| leucine/isoleucine/valine permease [Escherichia coli UMN026]
 gi|254163380|ref|YP_003046488.1| leucine/isoleucine/valine transporter permease [Escherichia coli B
           str. REL606]
 gi|254795373|ref|YP_003080210.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli O157:H7 str. TW14359]
 gi|261224737|ref|ZP_05939018.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily protein [Escherichia coli O157:H7
           str. FRIK2000]
 gi|261254368|ref|ZP_05946901.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily protein [Escherichia coli O157:H7
           str. FRIK966]
 gi|291284794|ref|YP_003501612.1| High-affinity branched-chain amino acid ABC transporter permease
           protein LivM [Escherichia coli O55:H7 str. CB9615]
 gi|293407037|ref|ZP_06650961.1| livM [Escherichia coli FVEC1412]
 gi|293416860|ref|ZP_06659497.1| livM [Escherichia coli B185]
 gi|298382783|ref|ZP_06992378.1| livM [Escherichia coli FVEC1302]
 gi|300898847|ref|ZP_07117150.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 198-1]
 gi|300931005|ref|ZP_07146363.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 187-1]
 gi|12518110|gb|AAG58563.1|AE005569_3 high-affinity branched-chain amino acid transport [Escherichia coli
           O157:H7 str. EDL933]
 gi|13363777|dbj|BAB37726.1| high-affinity branched-chain amino acid transport protein
           [Escherichia coli O157:H7 str. Sakai]
 gi|81247228|gb|ABB67936.1| LivM [Shigella boydii Sb227]
 gi|187429146|gb|ACD08420.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Shigella boydii CDC 3083-94]
 gi|187771702|gb|EDU35546.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC4196]
 gi|188018466|gb|EDU56588.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC4113]
 gi|189002470|gb|EDU71456.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC4076]
 gi|189358817|gb|EDU77236.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC4401]
 gi|189364579|gb|EDU82998.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC4486]
 gi|189369572|gb|EDU87988.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC4501]
 gi|189374689|gb|EDU93105.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC869]
 gi|189379900|gb|EDU98316.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC508]
 gi|194425411|gb|EDX41395.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli 101-1]
 gi|208727370|gb|EDZ76971.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC4206]
 gi|208733339|gb|EDZ82026.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC4045]
 gi|208741113|gb|EDZ88795.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC4042]
 gi|209157449|gb|ACI34882.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. EC4115]
 gi|209756088|gb|ACI76356.1| high-affinity branched-chain amino acid transport protein
           [Escherichia coli]
 gi|209756090|gb|ACI76357.1| high-affinity branched-chain amino acid transport protein
           [Escherichia coli]
 gi|209756092|gb|ACI76358.1| high-affinity branched-chain amino acid transport protein
           [Escherichia coli]
 gi|209756094|gb|ACI76359.1| high-affinity branched-chain amino acid transport protein
           [Escherichia coli]
 gi|209756096|gb|ACI76360.1| high-affinity branched-chain amino acid transport protein
           [Escherichia coli]
 gi|209914172|dbj|BAG79246.1| leucine ABC transporter ABC transporter permease component
           [Escherichia coli SE11]
 gi|217320847|gb|EEC29271.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O157:H7 str. TW14588]
 gi|218434147|emb|CAR15064.1| leucine/isoleucine/valine transporter subunit ; membrane component
           of ABC superfamily [Escherichia coli UMN026]
 gi|242378977|emb|CAQ33775.1| livM, subunit of branched chain amino acids ABC transporter and
           leucine ABC transporter [Escherichia coli BL21(DE3)]
 gi|253975281|gb|ACT40952.1| leucine/isoleucine/valine transporter subunit [Escherichia coli B
           str. REL606]
 gi|253979437|gb|ACT45107.1| leucine/isoleucine/valine transporter subunit [Escherichia coli
           BL21(DE3)]
 gi|254594773|gb|ACT74134.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Escherichia coli O157:H7 str.
           TW14359]
 gi|284923446|emb|CBG36541.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Escherichia coli 042]
 gi|290764667|gb|ADD58628.1| High-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli O55:H7 str. CB9615]
 gi|291425848|gb|EFE98882.1| livM [Escherichia coli FVEC1412]
 gi|291431436|gb|EFF04421.1| livM [Escherichia coli B185]
 gi|298276619|gb|EFI18137.1| livM [Escherichia coli FVEC1302]
 gi|300357468|gb|EFJ73338.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 198-1]
 gi|300461183|gb|EFK24676.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 187-1]
 gi|320187778|gb|EFW62453.1| Branched-chain amino acid transport system permease protein LivM
           [Shigella flexneri CDC 796-83]
 gi|320191527|gb|EFW66177.1| Branched-chain amino acid transport system permease protein LivM
           [Escherichia coli O157:H7 str. EC1212]
 gi|320639738|gb|EFX09332.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli O157:H7 str. G5101]
 gi|320645237|gb|EFX14253.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli O157:H- str. 493-89]
 gi|320650548|gb|EFX19014.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli O157:H- str. H 2687]
 gi|320655741|gb|EFX23664.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli O55:H7 str. 3256-97 TW 07815]
 gi|320661524|gb|EFX28939.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli O55:H7 str. USDA 5905]
 gi|320666547|gb|EFX33530.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli O157:H7 str. LSU-61]
 gi|323959692|gb|EGB55343.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H489]
 gi|323970053|gb|EGB65328.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli TA007]
 gi|324018695|gb|EGB87914.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 117-3]
 gi|326337575|gb|EGD61410.1| Branched-chain amino acid transport system permease protein LivM
           [Escherichia coli O157:H7 str. 1044]
 gi|326344674|gb|EGD68423.1| Branched-chain amino acid transport system permease protein LivM
           [Escherichia coli O157:H7 str. 1125]
 gi|332090545|gb|EGI95643.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Shigella boydii 3594-74]
          Length = 425

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|222035162|emb|CAP77907.1| High-affinity branched-chain amino acid transport system
           [Escherichia coli LF82]
 gi|312948009|gb|ADR28836.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli O83:H1 str. NRG 857C]
          Length = 425

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTLFGLEFSRSAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|331649260|ref|ZP_08350346.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Escherichia coli M605]
 gi|330909494|gb|EGH38008.1| branched-chain amino acid transport system permease protein LivM
           [Escherichia coli AA86]
 gi|331041758|gb|EGI13902.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Escherichia coli M605]
          Length = 425

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|170723818|ref|YP_001751506.1| inner-membrane translocator [Pseudomonas putida W619]
 gi|169761821|gb|ACA75137.1| inner-membrane translocator [Pseudomonas putida W619]
          Length = 433

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 98/329 (29%), Positives = 158/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 106 IIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 165

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 166 GLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 225

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+      +F     R        +  +F F  +  +  +F+Y VL  +  
Sbjct: 226 WLSFTGGPNGMPAPAPTFFGLEFGRRAKDGGVPIHEYFGFDYNANLKFVFIYAVLFLVVL 285

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  +  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA  
Sbjct: 286 AVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATY 345

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 346 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 397

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  + + L+++ R   L+R
Sbjct: 398 -------RVLLFGVLMVLMMIWRPRGLIR 419


>gi|291440255|ref|ZP_06579645.1| branched chain amino acid transport permease [Streptomyces
           ghanaensis ATCC 14672]
 gi|291343150|gb|EFE70106.1| branched chain amino acid transport permease [Streptomyces
           ghanaensis ATCC 14672]
          Length = 611

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 74/347 (21%), Positives = 134/347 (38%), Gaps = 28/347 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V    +       T++     ++G+ ILI+   A GL+IVVG  GLL L  V    +G
Sbjct: 267 ITVCGAFIAAACFPFTQTDDQYATLGVYILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 326

Query: 78  AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           AY+  ++              W  + V A+ S   G+++G P+L+ RGDYLAI TL   E
Sbjct: 327 AYAAALVSGSPSSPFGVHFPFWAAVLVGAVASLIFGVLIGAPTLRLRGDYLAIVTLGFGE 386

Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           IF+  +      +      G      +  L                 +      ++++L 
Sbjct: 387 IFRIAVNNTDGTSGPDLTNGSNGIASIPDLNILGFDFGIEHDIAGFTIGRFANYFFLMLL 446

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  +   +      + I  AW  IR+++ A  ++       KL AFAV +   G+AG   
Sbjct: 447 ITAVVVLVFRRSGDSRIGRAWVAIREDETAALAMGINGFRVKLIAFAVGATLAGLAGTVQ 506

Query: 250 AASRDRISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A     ++P+ +         +  +++ V+LGGM +++      A+L  +      +  +
Sbjct: 507 AHVTYTVTPEQYLFAGTTPPNSAFLLAAVVLGGMGTIAGPLIGAALLFLIPNKLQFLGDF 566

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                                +AL L++  R   L+  R        
Sbjct: 567 ---------------QLLAFGLALVLLMRFRPEGLIPNRRRQLEFHE 598


>gi|170681266|ref|YP_001745704.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli SMS-3-5]
 gi|170518984|gb|ACB17162.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli SMS-3-5]
          Length = 425

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|301329773|ref|ZP_07222512.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 78-1]
 gi|300844188|gb|EFK71948.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 78-1]
          Length = 425

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQTPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|295677427|ref|YP_003605951.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295437270|gb|ADG16440.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 389

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 150/350 (42%), Gaps = 17/350 (4%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           N+   +   +     ++    +       Y   +    ++YVM A GL++VVG  GLL L
Sbjct: 18  NRTKTLTIGILTTIFVIAAPMIIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDL 77

Query: 69  NCVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGL 112
             +  YAIGAY+  +L S +                 + IW+++P++  ++   G+++G 
Sbjct: 78  GYIAFYAIGAYTAALLSSPHLSTQFEWIAALAPHGLNVPIWIIVPIAMALAAMFGILLGA 137

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
           P+L+ RGDYLAI TL   EI +  +       N   G      +  +     S  +    
Sbjct: 138 PTLRLRGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIAPVQIGGFSFAQSHSL 197

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
                      YY+ +            L+ + I  AW  IR+++ A  ++       KL
Sbjct: 198 FGMQFPAVYLYYYLFVLCALFVIWTCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKL 257

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
            AFA+ ++F G++GA F A +  +SP+ F F E+++V++ V+LGGM  +  +     +L 
Sbjct: 258 LAFAMGASFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLA 317

Query: 293 GVVELCCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              E          N +         +    L  +A+ +++L RS  L  
Sbjct: 318 VFPEFLRSTMGPLQNMIFGHEMVDTEVIRQLLYGLAMVVIMLYRSEGLWP 367


>gi|239931887|ref|ZP_04688840.1| branched chain amino acid transport permease [Streptomyces
           ghanaensis ATCC 14672]
          Length = 608

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 74/347 (21%), Positives = 134/347 (38%), Gaps = 28/347 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V    +       T++     ++G+ ILI+   A GL+IVVG  GLL L  V    +G
Sbjct: 264 ITVCGAFIAAACFPFTQTDDQYATLGVYILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 323

Query: 78  AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           AY+  ++              W  + V A+ S   G+++G P+L+ RGDYLAI TL   E
Sbjct: 324 AYAAALVSGSPSSPFGVHFPFWAAVLVGAVASLIFGVLIGAPTLRLRGDYLAIVTLGFGE 383

Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           IF+  +      +      G      +  L                 +      ++++L 
Sbjct: 384 IFRIAVNNTDGTSGPDLTNGSNGIASIPDLNILGFDFGIEHDIAGFTIGRFANYFFLMLL 443

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  +   +      + I  AW  IR+++ A  ++       KL AFAV +   G+AG   
Sbjct: 444 ITAVVVLVFRRSGDSRIGRAWVAIREDETAALAMGINGFRVKLIAFAVGATLAGLAGTVQ 503

Query: 250 AASRDRISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A     ++P+ +         +  +++ V+LGGM +++      A+L  +      +  +
Sbjct: 504 AHVTYTVTPEQYLFAGTTPPNSAFLLAAVVLGGMGTIAGPLIGAALLFLIPNKLQFLGDF 563

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                                +AL L++  R   L+  R        
Sbjct: 564 ---------------QLLAFGLALVLLMRFRPEGLIPNRRRQLEFHE 595


>gi|295701316|ref|YP_003610317.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295441639|gb|ADG20806.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 389

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 151/350 (43%), Gaps = 17/350 (4%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           N+   +   +     ++    +       Y   +    ++YVM A GL++VVG  GLL L
Sbjct: 18  NRTKTLTIGILTTIFVIAAPMIIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDL 77

Query: 69  NCVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGL 112
             +  YAIGAY+  +L S +                 + IW+++P++  ++   G+++G 
Sbjct: 78  GYIAFYAIGAYTAALLSSPHLSTQFEWIAALAPHGLNVPIWIIVPIAMALAAMFGILLGA 137

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
           P+L+ RGDYLAI TL   EI +  +       N   G      +  +     S  +    
Sbjct: 138 PTLRLRGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIAPVQIGGFSFAQSHSL 197

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
                      YY+ +            L+ + I  AW  IR+++ A  ++       KL
Sbjct: 198 FGMQFPAVYLYYYLFVLCALFVIWTCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKL 257

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
            AFA+ ++F G++GA F A +  +SP+ F F E+++V++ V+LGGM  +  +     +L 
Sbjct: 258 LAFAMGASFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLA 317

Query: 293 GVVELCCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
              E          N +   +     +    L  +A+ +++L RS  L  
Sbjct: 318 VFPEFLRSTMGPLQNMIFGHEIVDTEVIRQLLYGLAMVVIMLYRSEGLWP 367


>gi|219848759|ref|YP_002463192.1| inner-membrane translocator [Chloroflexus aggregans DSM 9485]
 gi|219543018|gb|ACL24756.1| inner-membrane translocator [Chloroflexus aggregans DSM 9485]
          Length = 449

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 81/354 (22%), Positives = 138/354 (38%), Gaps = 19/354 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
                  + +    L  +         +   +  Q  I+   A GL++VVG  GLL L  
Sbjct: 67  RVATWFKVVLGVFALGVVLPYFGLLNPFYIDVATQAGIFTALALGLNVVVGFAGLLDLGY 126

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG------------LPSLKFR 118
           V  +A+GAY++ I+ +     I         I     +I+G            LP L+ R
Sbjct: 127 VAFFAVGAYTWGIMSTPQITEINPAWSPVDPILFYPFLIIGLILGLITGVLLGLPVLRLR 186

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV- 177
           GDYLAI TL   E+ + +        N   G      +      +   IR     +    
Sbjct: 187 GDYLAIVTLGFGEVIRVVANNLDRPVNVTNGSQGIRAIERPPLIIVDQIRNLGIQADDNQ 246

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +Y++F YY+++ +  LS  ++  L+ + I  AW  IR+++ A  +     +  KL AFA+
Sbjct: 247 LYQLFFYYLVIIIVLLSVIVVARLKHSRIGRAWEAIREDEIAAVAQGIPRVRMKLLAFAI 306

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G+ G  FAA +  I+P  F    +I ++++VILGGM S+        I+  +   
Sbjct: 307 GASFAGVMGVVFAAKQLFINPPTFDLLRSINILAMVILGGMGSIPGAMLGAIIVTMLDLQ 366

Query: 298 CCGMNFYYFNSLLKFD------CSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                          L  + L L+++ R   L      
Sbjct: 367 ILPRIAAVLREAQAAGAPIPRQFDPTQYQRLLFGLLLVLMMIFRQEGLWPDERR 420


>gi|293453761|ref|ZP_06664180.1| livM [Escherichia coli B088]
 gi|307311879|ref|ZP_07591517.1| inner-membrane translocator [Escherichia coli W]
 gi|291321887|gb|EFE61318.1| livM [Escherichia coli B088]
 gi|306908023|gb|EFN38523.1| inner-membrane translocator [Escherichia coli W]
 gi|315062733|gb|ADT77060.1| leucine/isoleucine/valine transporter subunit [Escherichia coli W]
 gi|323376679|gb|ADX48947.1| inner-membrane translocator [Escherichia coli KO11]
 gi|323944322|gb|EGB40397.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H120]
          Length = 425

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|260870181|ref|YP_003236583.1| high-affinity branched-chain amino acid transport, membrane
           component [Escherichia coli O111:H- str. 11128]
 gi|257766537|dbj|BAI38032.1| high-affinity branched-chain amino acid transport, membrane
           component [Escherichia coli O111:H- str. 11128]
 gi|323179018|gb|EFZ64592.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Escherichia coli 1180]
          Length = 425

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|156741873|ref|YP_001432002.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941]
 gi|156233201|gb|ABU57984.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941]
          Length = 454

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 84/352 (23%), Positives = 149/352 (42%), Gaps = 19/352 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +   LL  +         +   +  +  ++   A GL++VVG  GLL L  V  +A+G
Sbjct: 78  LTLGTILLAVVMPVFGVLNPFYIDVVTKAGMFAALALGLNVVVGFAGLLDLGYVAFFAVG 137

Query: 78  AYSYVILGSR------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           AY + I  +             +G   WL + +   +    G+++GLP L+ RGDYLAI 
Sbjct: 138 AYLWGIFSTPQISNIVPGMEPLHGSWFWLFLAIGLAVGAFFGVLLGLPVLRLRGDYLAIV 197

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI-YEIFMY 184
           TL + E+ + +        N   G      +      V  + +      S V  Y+++ Y
Sbjct: 198 TLGLGEVIRVLATNLDRPINITNGAQGIKDVGRPPLFVEPVFQALGMTISRVQEYQLYFY 257

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           +++L +  L+  ++  L  + I  AW  IR+++ A  ++   ++  KL AFAV ++F G 
Sbjct: 258 FLVLLVLALTVFVVHRLNDSRIGRAWTAIREDETAAIAMGIPLVRMKLLAFAVGASFAGT 317

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            G  F+A +  I+P  F    +I ++S+VILGGM S+        I+  +          
Sbjct: 318 MGVIFSALQTFINPPTFDLLRSIGILSMVILGGMGSIPGTMLGAVIVTLLDLQLLPRIAG 377

Query: 305 YFNSL------LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              +L      +            L  + L ++++ R   LL        L 
Sbjct: 378 ELAALQRRGVPIPSWFDPAQYQRLLFGLLLVIMMIFRPEGLLPEDRRRQELH 429


>gi|193068875|ref|ZP_03049835.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli E110019]
 gi|260857562|ref|YP_003231453.1| high-affinity branched-chain amino acid transport, membrane
           component [Escherichia coli O26:H11 str. 11368]
 gi|300907399|ref|ZP_07125046.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 84-1]
 gi|300926850|ref|ZP_07142617.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 182-1]
 gi|301302338|ref|ZP_07208470.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 124-1]
 gi|309794732|ref|ZP_07689154.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 145-7]
 gi|331665064|ref|ZP_08365965.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Escherichia coli TA143]
 gi|331674940|ref|ZP_08375697.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Escherichia coli TA280]
 gi|192957951|gb|EDV88394.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli E110019]
 gi|257756211|dbj|BAI27713.1| high-affinity branched-chain amino acid transport, membrane
           component [Escherichia coli O26:H11 str. 11368]
 gi|300400814|gb|EFJ84352.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 84-1]
 gi|300417109|gb|EFK00420.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 182-1]
 gi|300842501|gb|EFK70261.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 124-1]
 gi|308121782|gb|EFO59044.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 145-7]
 gi|315256048|gb|EFU36016.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 85-1]
 gi|323154293|gb|EFZ40496.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Escherichia coli EPECa14]
 gi|331057574|gb|EGI29560.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Escherichia coli TA143]
 gi|331067849|gb|EGI39247.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Escherichia coli TA280]
          Length = 425

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|193061716|ref|ZP_03042813.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli E22]
 gi|194426952|ref|ZP_03059504.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli B171]
 gi|256020802|ref|ZP_05434667.1| leucine/isoleucine/valine transporter permease subunit [Shigella
           sp. D9]
 gi|260846240|ref|YP_003224018.1| high-affinity branched-chain amino acid transport, membrane
           component [Escherichia coli O103:H2 str. 12009]
 gi|300822742|ref|ZP_07102879.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 119-7]
 gi|331670279|ref|ZP_08371118.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Escherichia coli TA271]
 gi|331679521|ref|ZP_08380191.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Escherichia coli H591]
 gi|332282007|ref|ZP_08394420.1| leucine/isoleucine/valine transporter permease subunit [Shigella
           sp. D9]
 gi|192932506|gb|EDV85103.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli E22]
 gi|194414913|gb|EDX31183.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Escherichia coli B171]
 gi|257761387|dbj|BAI32884.1| high-affinity branched-chain amino acid transport, membrane
           component [Escherichia coli O103:H2 str. 12009]
 gi|300524742|gb|EFK45811.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 119-7]
 gi|323162695|gb|EFZ48534.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Escherichia coli E128010]
 gi|331062341|gb|EGI34261.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Escherichia coli TA271]
 gi|331072693|gb|EGI44018.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Escherichia coli H591]
 gi|332104359|gb|EGJ07705.1| leucine/isoleucine/valine transporter permease subunit [Shigella
           sp. D9]
          Length = 425

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|121608836|ref|YP_996643.1| leucine/isoleucine/valine transporter permease subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121553476|gb|ABM57625.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 427

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 24/342 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  L +   +      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G 
Sbjct: 101 MAIGVLFVAGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGG 160

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   +GL+ W  +P++  +S   G ++G P L+ RGDYLAI TL   EI + +L 
Sbjct: 161 YTYALLNQYFGLTFWECLPIAGAMSALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLLN 220

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               +T G  GI    +    G  +         R+      +  S     IF+Y + L 
Sbjct: 221 NLTSLTGGPDGISGIPKPTVFGIEMARSAKVEGDRTFHELLGWTYSGEHMVIFLYLLALL 280

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  +   L R  +  AW  +R+++ A  SL       KLSAF + ++F G+ GAFF
Sbjct: 281 LVGATLLVSSRLIRMPMGRAWEALREDEIACRSLGLNPTRIKLSAFTLGASFAGIGGAFF 340

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ +++++V+LGGM S   +  A  +L  + EL      Y     
Sbjct: 341 AARQGLVNPESFTFIESALILAVVVLGGMGSQLGVILAALLLTALPELTREFAEY----- 395

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        +  + + L+++ R   LL  R P   L R
Sbjct: 396 ----------RMLIFGLVMILMMMWRPQGLLPARRPHVELPR 427


>gi|254254444|ref|ZP_04947761.1| ABC-type branched-chain amino acid transport system permease
           component [Burkholderia dolosa AUO158]
 gi|124899089|gb|EAY70932.1| ABC-type branched-chain amino acid transport system permease
           component [Burkholderia dolosa AUO158]
          Length = 423

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 99/341 (29%), Positives = 157/341 (46%), Gaps = 24/341 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V+ LL    +      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G Y
Sbjct: 98  IVWALLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGGY 157

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L   +G + W  +P++A+ S   G ++G P L+ RGDYLAI TL   EI + +   
Sbjct: 158 TYAMLNQYFGFTFWECLPLAAIASATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLANN 217

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLGM 190
              +T G  GI    +    G  +          +         S     IF+Y + L +
Sbjct: 218 LTSLTGGPDGISGIPKPTVFGIEMARSASVEGAKTFHELIGLEYSGEHMVIFLYLLALLL 277

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              +  +   L R  +  AW  +RD++ A  SL       KLSAF + +AF G+ GAFFA
Sbjct: 278 VGFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAGIGGAFFA 337

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           A +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   Y      
Sbjct: 338 ARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAEY------ 391

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                       +  + + L+++ R   LL    P   L +
Sbjct: 392 ---------RMLMFGLVMVLMMMWRPQGLLPASRPHVELPQ 423


>gi|82778718|ref|YP_405067.1| leucine/isoleucine/valine transporter permease subunit [Shigella
           dysenteriae Sd197]
 gi|309785775|ref|ZP_07680406.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Shigella dysenteriae 1617]
 gi|81242866|gb|ABB63576.1| high-affinity branched-chain amino acid transport [Shigella
           dysenteriae Sd197]
 gi|308926895|gb|EFP72371.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Shigella dysenteriae 1617]
          Length = 425

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|302561199|ref|ZP_07313541.1| branched chain amino acid transport permease [Streptomyces
           griseoflavus Tu4000]
 gi|302478817|gb|EFL41910.1| branched chain amino acid transport permease [Streptomyces
           griseoflavus Tu4000]
          Length = 611

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 76/347 (21%), Positives = 134/347 (38%), Gaps = 28/347 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V    +       T++     ++G+ ILI+   A GL+IVVG  GLL L  V    +G
Sbjct: 267 ITVCGAFIAAACFPFTQTDDQYATLGVYILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 326

Query: 78  AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           AY+  ++              W  + V A+ S   G+++G P+L+ RGDYLAI TL   E
Sbjct: 327 AYAAALVSGSPSSPFGVHFPFWAAVIVGAVASLVFGVLIGAPTLRLRGDYLAIVTLGFGE 386

Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           IF+         +      G      +  L      L          +      ++++L 
Sbjct: 387 IFRIAANNTDGTSGPDLTNGSNGIASIPDLNILGFDLGVPHDIAGFTIGRFANYFFLMLL 446

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  +   +      + I  AW  IR+++ A  ++       KL AFAV +   G+AG   
Sbjct: 447 ITAVVVLVFRRSGDSRIGRAWVAIREDETAAEAMGIHGFRVKLIAFAVGATLAGLAGTVQ 506

Query: 250 AASRDRISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A     ++P+ +         +  +++ V+LGGM +++      A+L  +      +  Y
Sbjct: 507 AHVTYTVTPEQYLFAGTTPPNSAFLLAAVVLGGMGTIAGPLIGAALLFLIPNKLQFLGDY 566

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                                +AL L++  R   L+  R        
Sbjct: 567 ---------------QLLAFGLALVLLMRFRPEGLIPNRRRQLEFHE 598


>gi|254250986|ref|ZP_04944304.1| Sulfate-transporting ATPase [Burkholderia dolosa AUO158]
 gi|124893595|gb|EAY67475.1| Sulfate-transporting ATPase [Burkholderia dolosa AUO158]
          Length = 594

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 51/326 (15%), Positives = 122/326 (37%), Gaps = 22/326 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L +V    L +  G  +  +Y  ++   I +Y + A GL ++ G  G+ S        
Sbjct: 10  FWLFLVVLFALPVLPGVLQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY+   L + YG+S WL + V   ++    +++G+ +++  G +L + T+        
Sbjct: 70  VGAYTTAFLTTHYGVSPWLALLVGVALTALVALVLGMVTMRLSGHFLPLGTIAWGLALFY 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +    + +     GI     L   G  + S                 +Y+++  +   + 
Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGVELDS--------------GRSLYFLIWAVVLAAI 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  +  
Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P  F  +  I  + + ++GG++ +       AIL  + +    +      S   F   
Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  +  + + L++      +  
Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313


>gi|300690696|ref|YP_003751691.1| leucine/isoleucine/valine transporter subunit ; inner-membrane
           translocator, membrane component of ABC superfamily
           [Ralstonia solanacearum PSI07]
 gi|299077756|emb|CBJ50394.1| leucine/isoleucine/valine transporter subunit ; Inner-membrane
           translocator, membrane component of ABC superfamily
           [Ralstonia solanacearum PSI07]
          Length = 378

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 93/344 (27%), Positives = 152/344 (44%), Gaps = 17/344 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             LL      +   FL       Y   +    L+Y+M A GL+IVVG  GLL L  +  Y
Sbjct: 16  AALLGFFILAIFAPFLVGAVGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAFY 75

Query: 75  AIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           A+GAY   +LGS +                   +W +IP+ A ++   G+++G P+LK R
Sbjct: 76  AVGAYMMALLGSPHLTNQFEWIHQLFPNGLHTLVWWVIPLGAGLAALFGILLGAPTLKLR 135

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           GDYLAI TL   EI +  +       N   G    + +  +        +          
Sbjct: 136 GDYLAIVTLGFGEIIRIFMNNLDRPLNITNGPKGVNLIEPVKLFGFDFSKRHDIFGIHFE 195

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                YY+ + +     ++ L L+ + I  AW  IR+++ A  ++       KL AFA+ 
Sbjct: 196 PVHMYYYLFVILAMGIITVCLRLQNSRIGRAWVAIREDEIAAKAMGINTRNIKLLAFAMG 255

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           ++F G++GA FA+ +  +SP+ F   E+I +++IV+LGGM  +  +     +L+G  EL 
Sbjct: 256 ASFGGVSGAMFASFQGFVSPESFVLWESIYILAIVVLGGMGHIPGVILGGILLVGFQELL 315

Query: 299 CGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             +     N L         +    L  +A+  V+L R   L  
Sbjct: 316 RALAEPVQNKLFGHVIVEAEVLRQLLFGLAMVGVMLYRPAGLWP 359


>gi|70734102|ref|YP_257742.1| high-affinity branched-chain amino acid ABC transporter permease
           BraE [Pseudomonas fluorescens Pf-5]
 gi|68348401|gb|AAY96007.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraE [Pseudomonas fluorescens Pf-5]
          Length = 431

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 99/329 (30%), Positives = 158/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 99  IIPALIVIAIVFPFFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 158

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 159 GLALGYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 218

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +      R           FF    +  +  +F+Y VL  +  
Sbjct: 219 WLSFTGGPNGMPVPSPTFLGLEFGRKAKDGGVPFHEFFGLEYNPNLKFLFIYIVLFLVVL 278

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   I   L R  +  AW  +R+++ A  ++    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 279 LVLYIKHRLTRMPVGRAWEALREDEIACRAMGLNHVLVKLSAFTIGASTAGLAGVFFASY 338

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 339 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 390

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  I + L+++ R   L+R
Sbjct: 391 -------RVLLFGILMVLMMIWRPRGLIR 412


>gi|331685100|ref|ZP_08385686.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Escherichia coli H299]
 gi|331077471|gb|EGI48683.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Escherichia coli H299]
          Length = 425

 Score =  132 bits (331), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|218702201|ref|YP_002409830.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           coli IAI39]
 gi|218372187|emb|CAR20049.1| leucine/isoleucine/valine transporter subunit ; membrane component
           of ABC superfamily [Escherichia coli IAI39]
          Length = 425

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|90423132|ref|YP_531502.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90105146|gb|ABD87183.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 445

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 116/334 (34%), Positives = 177/334 (52%), Gaps = 19/334 (5%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +     FL       Q+YI  +GI +L YVM  WGL++VVG  GLL L  V  YA+GAYS
Sbjct: 113 LLLGFTFLMPVIFYDQRYILDLGILVLTYVMLGWGLNVVVGLAGLLDLGYVAFYAVGAYS 172

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L + + LS W+ +P++ +++   GM++G P L+ RGDYLAI TL   EI + ++I W
Sbjct: 173 YALLATNFDLSFWVCLPLAGILAAFWGMMLGFPVLRLRGDYLAIVTLAFGEIIRLVIINW 232

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRF----FRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           + +T G  GI    R    G  +               S     +F++Y++L +  L+  
Sbjct: 233 QSLTGGPNGISGIPRPTLFGIPLTPAEDGLAARLGIEFSPTHRIVFLFYLILALALLTNW 292

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           + + LRR  I  AW  +R+++ A  +L       KL+AFA  + F G AGAFFA  +  I
Sbjct: 293 VTIRLRRLPIGRAWEALREDEVACRALGINTTTTKLTAFATGAMFGGFAGAFFATRQGFI 352

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP+ F F E+ +V++IV+LGGM S   +A A   +IG  EL  G++ Y            
Sbjct: 353 SPESFTFQESALVLAIVVLGGMGSQLGVALAAVAMIGGFELFRGLDQY------------ 400

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                 +  +A+ L+++ R   L+  R P+ FLE
Sbjct: 401 ---RMLVFGLAMVLLMIWRPRGLIGHRAPTVFLE 431


>gi|28872031|ref|NP_794650.1| high-affinity branched-chain amino acid ABC transporter permease
           BraE [Pseudomonas syringae pv. tomato str. DC3000]
 gi|28855284|gb|AAO58345.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraE [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|331014637|gb|EGH94693.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraE [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 437

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KYI ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 104 IIPLLIVVAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W  +P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +F     R        +  +F F  +  +  IF+Y VL  +  
Sbjct: 224 WLSFTGGPNGVPVPSPTFFGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYTVLFLVVL 283

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTIGVVIAAFVLTVAPELLRSFSEY-------- 395

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  I + L+++ R   L+R
Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417


>gi|24114716|ref|NP_709226.1| leucine/isoleucine/valine transporter permease subunit [Shigella
           flexneri 2a str. 301]
 gi|30065267|ref|NP_839438.1| leucine/isoleucine/valine transporter permease subunit [Shigella
           flexneri 2a str. 2457T]
 gi|24053930|gb|AAN44933.1| high-affinity branched-chain amino acid transport protein, membrane
           component [Shigella flexneri 2a str. 301]
 gi|30043529|gb|AAP19249.1| high-affinity branched-chain amino acid transport protein, membrane
           component [Shigella flexneri 2a str. 2457T]
 gi|281602804|gb|ADA75788.1| High-affinity branched-chain amino acid transport protein, membrane
           component [Shigella flexneri 2002017]
 gi|313647246|gb|EFS11698.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Shigella flexneri 2a str. 2457T]
 gi|332749445|gb|EGJ79862.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Shigella flexneri K-671]
 gi|332750291|gb|EGJ80702.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Shigella flexneri 4343-70]
 gi|332751346|gb|EGJ81749.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Shigella flexneri 2747-71]
 gi|332763561|gb|EGJ93800.1| branched-chain amino acid transport system / permease component
           family protein [Shigella flexneri 2930-71]
 gi|332996242|gb|EGK15869.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Shigella flexneri VA-6]
 gi|332996596|gb|EGK16221.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Shigella flexneri K-272]
 gi|332997277|gb|EGK16893.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Shigella flexneri K-218]
 gi|333012369|gb|EGK31750.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Shigella flexneri K-304]
 gi|333013005|gb|EGK32381.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Shigella flexneri K-227]
          Length = 425

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|323188954|gb|EFZ74238.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Escherichia coli RN587/1]
          Length = 425

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 101/329 (30%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  G+L L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGMLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|237798305|ref|ZP_04586766.1| high-affinity branched-chain amino acid ABC transporter permease
           BraE [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331021157|gb|EGI01214.1| high-affinity branched-chain amino acid ABC transporter permease
           BraE [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 437

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KYI ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W  +P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +F     R        +  +F F  +  +  IF+Y VL  +  
Sbjct: 224 WLSFTGGPNGVPVPSPTFFGLEFGRRAKDGGIPIHEYFGFDYNPDLKFIFIYTVLFLVVL 283

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTIGVVIAAFVLTVAPELLRSFSEY-------- 395

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  I + L+++ R   L+R
Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417


>gi|187929777|ref|YP_001900264.1| inner-membrane translocator [Ralstonia pickettii 12J]
 gi|241663903|ref|YP_002982263.1| inner-membrane translocator [Ralstonia pickettii 12D]
 gi|309781507|ref|ZP_07676243.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Ralstonia sp. 5_7_47FAA]
 gi|187726667|gb|ACD27832.1| inner-membrane translocator [Ralstonia pickettii 12J]
 gi|240865930|gb|ACS63591.1| inner-membrane translocator [Ralstonia pickettii 12D]
 gi|308919920|gb|EFP65581.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Ralstonia sp. 5_7_47FAA]
          Length = 375

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 92/344 (26%), Positives = 154/344 (44%), Gaps = 17/344 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             L   +   +   F+       Y   +    L+Y+M A GL+IVVG  GLL L  +  Y
Sbjct: 13  AALYGFLILAIFAPFIVGAAGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAFY 72

Query: 75  AIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           A+GAY   +LGS +                 L +W +IP+ A ++   G+++G P LK R
Sbjct: 73  AVGAYMMALLGSPHLSNQFEWIHNLFPNGLHLIVWWVIPLGAGLAALFGILLGTPVLKLR 132

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           GDYLAI TL   EI +  +       N   G    + +  +        +   F      
Sbjct: 133 GDYLAIVTLGFGEIIRIFMNNLDRPVNITNGPKGINLIEPVKIFGFDFSKRHDFFGIRFD 192

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                YY+ + +  +   + L L+ + I  AW  +R+++ A  ++       KL AFA+ 
Sbjct: 193 SVYMYYYLFVILAAIIIIVCLRLQNSRIGRAWVALREDEIAAKAMGINTRNIKLLAFAMG 252

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           ++F G++GA FA+ +  +SP+ F   E+I +++IV+LGGM  +  +     +L+G  EL 
Sbjct: 253 ASFGGVSGAMFASFQGFVSPESFVLWESIYILAIVVLGGMGHIPGVILGGILLVGFQELL 312

Query: 299 CGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             +     N L         +    L  +A+ +V+L R   L  
Sbjct: 313 RALAEPVQNKLFGHVIVEAEVLRQLLFGLAMVVVMLYRPSGLWP 356


>gi|206577351|ref|YP_002236179.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Klebsiella pneumoniae 342]
 gi|288933166|ref|YP_003437225.1| inner-membrane translocator [Klebsiella variicola At-22]
 gi|290511969|ref|ZP_06551337.1| branched-chain amino acid transport system permease [Klebsiella sp.
           1_1_55]
 gi|206566409|gb|ACI08185.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivM [Klebsiella pneumoniae 342]
 gi|288887895|gb|ADC56213.1| inner-membrane translocator [Klebsiella variicola At-22]
 gi|289775759|gb|EFD83759.1| branched-chain amino acid transport system permease [Klebsiella sp.
           1_1_55]
          Length = 425

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  LL+          +    +    +IY++   GL++VVG  GLL L     YAIGA
Sbjct: 91  LFLIALLVIAVAWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YGL  W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +  F G             +   FF          IF+Y V L 
Sbjct: 211 NNTEITGGPNGISQIPKPTFFGLEFSRTAREGGWDTFSNFFGVKYDPSDRVIFLYLVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  LS  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 271 LVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y     
Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        ++   + L+++ R   LL +      L+
Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRVQLKLK 416


>gi|320175714|gb|EFW50802.1| Branched-chain amino acid transport system permease protein LivM
           [Shigella dysenteriae CDC 74-1112]
          Length = 425

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIVTLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|330963370|gb|EGH63630.1| high-affinity branched-chain amino acid ABC transporter permease
           BraE [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 437

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KYI ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W  +P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +F     R        +  +F F  +  +  IF+Y VL  +  
Sbjct: 224 WLSFTGGPNGVPVPSPTFFGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYTVLFLVVL 283

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTIGVVIAAFVLTVAPELLRSFSEY-------- 395

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  I + L+++ R   L+R
Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417


>gi|152972326|ref|YP_001337472.1| leucine/isoleucine/valine transporter permease subunit [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238896915|ref|YP_002921660.1| leucine/isoleucine/valine transporter permease subunit [Klebsiella
           pneumoniae NTUH-K2044]
 gi|329998309|ref|ZP_08303046.1| branched-chain amino acid ABC transporter, permease protein
           [Klebsiella sp. MS 92-3]
 gi|150957175|gb|ABR79205.1| high-affinity branched-chain amino acid transport [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238549242|dbj|BAH65593.1| high-affinity branched-chain amino acid transporter membrane
           component [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|328538753|gb|EGF64838.1| branched-chain amino acid ABC transporter, permease protein
           [Klebsiella sp. MS 92-3]
          Length = 425

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  LL+          +    +    +IY++   GL++VVG  GLL L     YAIGA
Sbjct: 91  LFLIALLVIAVAWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YGL  W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +  F G             +   FF          IF+Y V L 
Sbjct: 211 NNTEITGGPNGISQIPKPTFFGLEFSRSAREGGWDTFSNFFGVKYDPSDRVIFLYLVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  LS  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 271 LVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y     
Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY----- 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        ++   + L+++ R   LL +      L+
Sbjct: 386 ----------SMLMLGGLMVLMMIWRPQGLLPMTRVQLKLK 416


>gi|256025820|ref|ZP_05439685.1| leucine/isoleucine/valine transporter permease subunit [Escherichia
           sp. 4_1_40B]
          Length = 425

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 101/329 (30%), Positives = 156/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+ GGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAESAFVLAIVVFGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|323174093|gb|EFZ59721.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM [Escherichia coli LT-68]
          Length = 422

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 100 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 159

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 160 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 219

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 220 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 279

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 280 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 339

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 340 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 384

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 385 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 413


>gi|94311797|ref|YP_585007.1| inner-membrane translocator [Cupriavidus metallidurans CH34]
 gi|93355649|gb|ABF09738.1| leucine/isoleucine/valine transporter subunit, membrane component
           of ABC superfamily [Cupriavidus metallidurans CH34]
          Length = 384

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 94/345 (27%), Positives = 154/345 (44%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +  L+  +   L   F   T    Y   +    L+Y+M A GL+IVVG  GLL L  +  
Sbjct: 21  LAALVGFLVVALCAPFFVQTFGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAF 80

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY   +LGS +                 LS+W ++P++ +++   G+++G P+LK 
Sbjct: 81  YAVGAYMMALLGSPHLSNQFEWIHQLFPNGLHLSMWFVLPIAVVVAATFGVLLGAPTLKL 140

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +        +         
Sbjct: 141 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITAVDPVHIFGFDFSKSHEIFGLKF 200

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+L+ +  +   I L L+ + I  A+  IR+++ A  ++       KL AFA+
Sbjct: 201 TPVFMYYYLLVALVIVIVFICLRLQNSRIGRAFVAIREDEIAAKAMGINTRNIKLLAFAM 260

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G +GA F A +  +SP+ F   E+I V++IV+LGGM  +  +     +L+G  EL
Sbjct: 261 GASFGGASGATFGAFQGFVSPESFTLWESIYVLAIVVLGGMGHIPGVILGGILLVGFQEL 320

Query: 298 CCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              +       +         +    L  +AL  V+L R   L  
Sbjct: 321 LRAVAEPIQTGIFGQVIVDAEVLRQLLFGLALVGVMLYRPAGLWP 365


>gi|254246684|ref|ZP_04940005.1| ABC branched-chain amino acid family transporter [Burkholderia
           cenocepacia PC184]
 gi|124871460|gb|EAY63176.1| ABC branched-chain amino acid family transporter [Burkholderia
           cenocepacia PC184]
          Length = 603

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 54/326 (16%), Positives = 124/326 (38%), Gaps = 22/326 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L +V    L +  GA +  +Y  ++   I +Y + A GL ++ G  G+ S        
Sbjct: 19  FWLFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 78

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY+   L +RYG+S WL + V  +++    +++G  +++  G +L + T+        
Sbjct: 79  IGAYATAFLTTRYGVSPWLALIVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 138

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +    + +     GI     L   G  + S                 +Y+++  +   + 
Sbjct: 139 LFGNLELL-GKYDGINGIPALNLFGIVLES--------------GRSLYFLIWAVVLAAI 183

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  +  
Sbjct: 184 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 243

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P  F  +  I  + + ++GG++ +       AIL  + +    +      S   F   
Sbjct: 244 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 300

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  +  + + L++      +  
Sbjct: 301 ----EIIVFGVLMVLLLQYARQGVWP 322


>gi|187925876|ref|YP_001897518.1| branched-chain amino acid ABC transporter ATPase/inner membrane
           protein [Burkholderia phytofirmans PsJN]
 gi|187717070|gb|ACD18294.1| ABC transporter related [Burkholderia phytofirmans PsJN]
          Length = 594

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/327 (16%), Positives = 119/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V    L +        +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   FFWLFLVVLFALPVLPQPIHVPEYWVTLLNYIGLYSIVAIGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IGAY+   L +RYG+S WL +     ++    +++GL +++  G +L + T+       
Sbjct: 69  GIGAYATAYLTTRYGVSPWLALIAGVAVTALIALMLGLVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +    + +     GI     L   G  + S                 +YY++  +   +
Sbjct: 129 YLFGNLEML-GKYDGINGIPVLNVFGIDLESGRH--------------IYYLIWLVVLGA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  + 
Sbjct: 174 VISVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWMRVVIFVYAAVLAAVSGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  +  I  + + ++GG++ +       AIL  + +    +          F  
Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGENGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  I + L++      +  
Sbjct: 292 -----EVIVFGILMVLLLQYARQGVWP 313


>gi|213967949|ref|ZP_03396095.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraE [Pseudomonas syringae pv. tomato T1]
 gi|302059291|ref|ZP_07250832.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraE [Pseudomonas syringae pv. tomato K40]
 gi|302131563|ref|ZP_07257553.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraE [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|213927292|gb|EEB60841.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraE [Pseudomonas syringae pv. tomato T1]
          Length = 437

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KYI ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 104 IIPLLIVVAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W  +P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +F     R        +  +F F  +  +  IF+Y VL  +  
Sbjct: 224 WLSFTGGPNGVPVPSPTFFGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYTVLFLVVL 283

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTIGVVIAAFVLTVAPELLRSFSEY-------- 395

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  I + L+++ R   L+R
Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417


>gi|320181948|gb|EFW56854.1| Branched-chain amino acid transport system permease protein LivM
           [Shigella boydii ATCC 9905]
          Length = 425

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPIFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 342

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E   V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 343 TFAEPAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 387

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +  P   L+
Sbjct: 388 LMLGGLMVLMMIWRPQGLLPMTRPQLKLK 416


>gi|71733297|ref|YP_272892.1| high-affinity branched-chain amino acid ABC transporter permease
           BraE [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|289623768|ref|ZP_06456722.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraE [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289646550|ref|ZP_06477893.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraE [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|298484889|ref|ZP_07002988.1| branched-chain amino acid transport system permease protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|71553850|gb|AAZ33061.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraE [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|298160576|gb|EFI01598.1| branched-chain amino acid transport system permease protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|330865920|gb|EGH00629.1| high-affinity branched-chain amino acid ABC transporter permease
           BraE [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330886855|gb|EGH20290.1| high-affinity branched-chain amino acid ABC transporter permease
           BraE [Pseudomonas syringae pv. mori str. 301020]
          Length = 437

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KYI ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W  +P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +F     R        +  +F F  +  +  +F+Y VL  +  
Sbjct: 224 WLSFTGGPNGVPVPSPTFFGLEFGRRAKDGGIPIHEYFGFDYNPDLKFLFIYTVLFLVVL 283

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 395

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  I + L+++ R   L+R
Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417


>gi|320321856|gb|EFW77952.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraE [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320331037|gb|EFW87011.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraE [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330872281|gb|EGH06430.1| high-affinity branched-chain amino acid ABC transporter permease
           BraE [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 437

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KYI ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W  +P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +F     R        +  +F F  +  +  +F+Y VL  +  
Sbjct: 224 WLSFTGGPNGVPVPSPTFFGLEFGRRAKDGGIPIHEYFGFDYNPDLKFLFIYTVLFLVVL 283

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 395

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  I + L+++ R   L+R
Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417


>gi|78064750|ref|YP_367519.1| branched chain amino acid ABC transporter ATPase/inner membrane
           protein [Burkholderia sp. 383]
 gi|77965495|gb|ABB06875.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter ATP-binding protein 1,
           HAAT family [Burkholderia sp. 383]
          Length = 594

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 125/326 (38%), Gaps = 22/326 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + +V    L +  GA +  +Y  ++   I +Y + A GL ++ G  G+ S        
Sbjct: 10  FWVFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY+  +L +RYG+S WL + V  +++    +++G  +++  G +L + T+        
Sbjct: 70  IGAYATALLTTRYGVSPWLALIVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +    + +     GI     L   G  + S                 +Y+++  +   + 
Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGIELES--------------GRSLYFLIWAVVLAAI 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  +  
Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P  F  +  I  + + ++GG++ +       AIL  + +    +      S   F   
Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  +  + + L++      +  
Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313


>gi|330873759|gb|EGH07908.1| high-affinity branched-chain amino acid ABC transporter permease
           BraE [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 437

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KYI ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W  +P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +F     R        +  +F F  +  +  IF+Y VL  +  
Sbjct: 224 WLSFTGGPNGVPVPSPTFFGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYTVLFLVVL 283

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTIGVVIAAFVLTVAPELLRSFSEY-------- 395

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  I + L+++ R   L+R
Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417


>gi|317048652|ref|YP_004116300.1| inner-membrane translocator [Pantoea sp. At-9b]
 gi|316950269|gb|ADU69744.1| inner-membrane translocator [Pantoea sp. At-9b]
          Length = 427

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 101/328 (30%), Positives = 155/328 (47%), Gaps = 22/328 (6%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               S KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY   +     GL
Sbjct: 110 FPFLSSKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYEYLGL 169

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W ++P++A+++   G ++G P L+  GDYLAI TL   EI + +L  W   T G  G+
Sbjct: 170 GFWSMLPLAALMAAFAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGV 229

Query: 151 YVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
            V    +F     R           FF    +  +  IF+Y VL+ +  L   I   L R
Sbjct: 230 SVPSPTFFGLEFGRRAREGGVPYNEFFHLDYNPNMKFIFIYVVLVLVVLLVLWIKHRLTR 289

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
             I  AW  +R+++ A  ++    +  KLSAF + ++  G+AG FFA  +  ++P  F F
Sbjct: 290 MPIGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGIAGVFFATYQGFVNPTSFTF 349

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            E+ ++++IV+LGGM S   +  A  +L    EL      Y                  L
Sbjct: 350 FESALILAIVVLGGMGSTLGVVLAAFVLTVAPELLRSFAEY---------------RVLL 394

Query: 324 MVIALFLVILMRSHSLLRLRTPSNFLER 351
             + + L+++ R   L+R       L +
Sbjct: 395 FGMLMVLMMIWRPRGLVRTARVGVPLRK 422


>gi|66043866|ref|YP_233707.1| inner-membrane translocator [Pseudomonas syringae pv. syringae
           B728a]
 gi|63254573|gb|AAY35669.1| inner-membrane translocator [Pseudomonas syringae pv. syringae
           B728a]
 gi|330971585|gb|EGH71651.1| inner-membrane translocator [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 437

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 158/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KYI ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W  +P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +      R        +  +F F  +  +  IF+Y VL  +  
Sbjct: 224 WLSFTGGPNGVPVPAPTFLGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYTVLFLVVL 283

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 395

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  I + L+++ R   L+R
Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417


>gi|77456782|ref|YP_346287.1| inner-membrane translocator [Pseudomonas fluorescens Pf0-1]
 gi|77380785|gb|ABA72298.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 433

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 98/329 (29%), Positives = 153/329 (46%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  ++         S  Y+  + I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 100 IIPLMIAIAVALPFFSNSYLLGVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 159

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+ +G  G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 160 GLALGYQYLGLGFWTVLPLAAITAGLAGCILGFPVLRLHGDYLAIVTLGFGEIIRLVLNN 219

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W  +T G  G+      +F     +           FF    +  +   F+Y VL  +  
Sbjct: 220 WLSLTGGPNGMPAPLPTFFGLEFGKRAKDGGVPFHEFFGIAYNPDVKYYFIYAVLFLVVL 279

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L +  +  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA  
Sbjct: 280 AVLYIKHRLVKMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFATY 339

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL  G   Y        
Sbjct: 340 QGFVNPTSFTFFESALILAIVVLGGMGSTIGVVIAAFVLTVAPELLRGFAEY-------- 391

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  I + L+++ R   L+R
Sbjct: 392 -------RVLLFGILMVLMMIWRPRGLIR 413


>gi|40063655|gb|AAR38444.1| branched-chain amino acid ABC transporter, ATP-binding/permease
           protein [uncultured marine bacterium 582]
          Length = 844

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/325 (18%), Positives = 127/325 (39%), Gaps = 30/325 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++  +   L L  T+      +   +ILIY + A G +I++G  GL+S    I + + A
Sbjct: 9   LLILTVCGLLLLPLTELTGLTTTTASEILIYAIAALGFNILLGYTGLVSFGHGIFFGVAA 68

Query: 79  YSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           Y+  I+  +      +  + +S + +   G+ +G  SL+  G Y ++ TL  + +   ++
Sbjct: 69  YAASIIQVKLMPGFIITPMILSVLFTTILGLGIGFLSLRLSGVYFSLLTLSFAAMTFYVI 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +W   T G+ G    +R    G  + +                  +Y+++ +      +
Sbjct: 129 YRWTHFTGGEDGYGGMERPTLFGIDLNNQT--------------AFFYMVMLIFIAVVFL 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           I  L  +   +    IR+N +    +   +   +L +F +S+ F+G+AG+ F   +  I 
Sbjct: 175 INRLVNSPFGSVLTAIRENSQRASFIGYDVKKYRLISFTLSAFFVGIAGSIFPFLKYYIG 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            ++   + +  ++++ ILGG       A      I   EL       +            
Sbjct: 235 AELVHVAHSGEILALSILGGSRHFMGPALGALFFILFRELLSEYTSSW------------ 282

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                L  +     +L     L+ L
Sbjct: 283 ---QLLFGLMFMGFVLFSPKGLMGL 304


>gi|297161383|gb|ADI11095.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces bingchenggensis BCW-1]
          Length = 579

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 75/358 (20%), Positives = 140/358 (39%), Gaps = 28/358 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R++        + ++  L+  +    T+ +     +G+ ILI+   A GL+IVVG  GLL
Sbjct: 213 RMSALTAKYRSVTLLAALVTAVAFPFTQDKASYTELGVNILIFATVALGLNIVVGLAGLL 272

Query: 67  SLNCVIAYAIGAYSYVI------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
            L  V    +GAY+  +               W  +   A++S   G+++G P+L+ RGD
Sbjct: 273 DLGYVAFLGVGAYTAALVSGSTSSTLDVHFPFWAAVIAGAVVSLIFGVVIGAPTLRLRGD 332

Query: 121 YLAIATLIMSEIFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           YLAI TL   EIF+  +     ++      G      +  L     +           + 
Sbjct: 333 YLAIVTLGFGEIFRLAMQNMDGVSGPSVTNGPNGIPNIPPLEIFGFNFDEDHTVLGRTLD 392

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                + ++L +  +   +      + I  AW  IR+++ A  ++       KL AFA+ 
Sbjct: 393 SNANYFLLMLLVTVVVVLVFSRAGNSRIGRAWVAIREDETAATAMGINGFRVKLIAFALG 452

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENI-----IVISIVILGGMTSLSKIAKATAILIG 293
           +   G+AG  +A  +  + P+ + F+  +      +++ VILGGM ++        +L  
Sbjct: 453 ATLAGVAGTVWAHVQTTVVPEQYVFAGPVPPNSTFLLAAVILGGMGTIGGPLLGATLLFL 512

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           + +       Y                     IAL L++  R   ++  R        
Sbjct: 513 IPKKLEFFQDY---------------QLLAFGIALILIMRFRPEGIIPNRRQQLEYHE 555


>gi|163846509|ref|YP_001634553.1| inner-membrane translocator [Chloroflexus aurantiacus J-10-fl]
 gi|222524294|ref|YP_002568765.1| inner-membrane translocator [Chloroflexus sp. Y-400-fl]
 gi|163667798|gb|ABY34164.1| inner-membrane translocator [Chloroflexus aurantiacus J-10-fl]
 gi|222448173|gb|ACM52439.1| inner-membrane translocator [Chloroflexus sp. Y-400-fl]
          Length = 449

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 143/364 (39%), Gaps = 19/364 (5%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M    +           + +    L  +         +   +  Q  I+   A GL++VV
Sbjct: 57  MLSMLVAYRSRVAGWFKVVLGVFALGIVLPYFGTLNPFYIDVATQAGIFTALALGLNVVV 116

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY------------GLSIWLLIPVSAMISGACGM 108
           G  GLL L  V  +A+GAY++ I  +               +  +  + +  ++    G+
Sbjct: 117 GFAGLLDLGYVAFFAVGAYAWAIFSTPQISEINPAWSPVDPIMFYPFLIIGLILGLITGV 176

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
           ++GLP L+ RGDYLAI TL   E+ + I        N   G      +      +  L+R
Sbjct: 177 LLGLPVLRLRGDYLAIVTLGFGEVIRVIANNLDRPVNVTNGSQGIRDIERPPLVLVDLVR 236

Query: 169 FFRFPSSFV-IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                +    +Y++F YY++L +  L+  ++  L+ + I  AW  IR+++ A  +     
Sbjct: 237 NLGVVADDNRLYQLFFYYLVLIILLLTVIVVARLKNSRIGRAWEAIREDEVAAVAQGIPR 296

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
           +  KL AFA+ ++F G+ G  FA+ +  I+P  F    +I ++ +VILGGM S+      
Sbjct: 297 VRMKLLAFAIGASFAGVMGVVFASKQLFINPPTFDLLRSINILVMVILGGMGSIPGAMLG 356

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFN------MRHTTLMVIALFLVILMRSHSLLR 341
             I+  +                                     + L ++++ R   L  
Sbjct: 357 AIIVTMLDLQILPRTAAVIREAQAAGLPIPRQFDPTQYQRLFFGLLLVIMMIFRPEGLWP 416

Query: 342 LRTP 345
               
Sbjct: 417 DERR 420


>gi|104783848|ref|YP_610346.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           entomophila L48]
 gi|95112835|emb|CAK17563.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas entomophila L48]
          Length = 433

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 99/329 (30%), Positives = 159/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 106 IIPALIVIAIVFPVFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 165

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 166 GLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 225

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +      R        +  FF F  +  +  +F+Y VL  +  
Sbjct: 226 WLSFTGGPNGMPVPSPTFMGLEFGRRAKDGGVPIHEFFGFEYNANLKFVFIYAVLFLVVL 285

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  +  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 286 AVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFASY 345

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 346 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 397

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  + + L+++ R   L+R
Sbjct: 398 -------RVLLFGVLMVLMMIWRPRGLIR 419


>gi|294628781|ref|ZP_06707341.1| branched chain amino acid transport permease [Streptomyces sp. e14]
 gi|292832114|gb|EFF90463.1| branched chain amino acid transport permease [Streptomyces sp. e14]
          Length = 612

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 74/347 (21%), Positives = 136/347 (39%), Gaps = 28/347 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           ++V    +       T++     ++G+ ILI+   A GL+IVVG  GLL L  V    +G
Sbjct: 268 ISVCGAFIAAALFPFTQTDDQYATLGVYILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 327

Query: 78  AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           AY+  ++              W  + V    S   G+++G P+L+ RGDYLAI TL   E
Sbjct: 328 AYAAALVSGSPNSPFDVHFPFWAAVLVGGAASLVFGVLIGAPTLRLRGDYLAIVTLGFGE 387

Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           IF+  +      +      G      +  L                 +      ++++L 
Sbjct: 388 IFRITVNNLDGTSGPDLTNGSNGIASIPNLDVLGFDFGAQHDIGGFTIGRFANYFFLMLI 447

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  +   +      + I  AW  IR+++ A  ++       KL AFAV ++  G+AG   
Sbjct: 448 ITAVVVLVFRRSGNSRIGRAWVAIREDETAALAMGINGFRVKLIAFAVGASLAGLAGTVQ 507

Query: 250 AASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A     ++P+ + F+      +  +++ V+LGGM +++      A+L  +      +  Y
Sbjct: 508 AHVTYTVTPEQYLFAGAVPPNSAFLLAAVVLGGMGTIAGPLIGAALLFLIPNKLQFLGDY 567

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                                +AL L++  R   ++  R        
Sbjct: 568 ---------------QLFAFGLALILLMRFRPEGIVPNRRRQLEFHE 599


>gi|325527882|gb|EGD05139.1| putative branched-chain amino acid ABC transporter ATP-binding
           membrane protein [Burkholderia sp. TJI49]
          Length = 595

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 124/326 (38%), Gaps = 22/326 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + +V    L +  GA +  +Y  ++   I +Y + A GL ++ G  G+ S        
Sbjct: 11  FWVFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 70

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY+   L +RYG+S WL + V  +++    +++G  +++  G +L + T+        
Sbjct: 71  IGAYATAFLTTRYGVSPWLALIVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +    + +     GI     L   G  + +                 +Y+++  +   + 
Sbjct: 131 LFGNLEML-GKYDGINGIPALSLFGLALDT--------------GRSLYFLIWAVVLAAI 175

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  +  
Sbjct: 176 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 235

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P  F  +  I  + + ++GG++ +       AIL  + +    +      S   F   
Sbjct: 236 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 292

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  +  + + L++      +  
Sbjct: 293 ----EIIVFGVLMVLLLQYARQGVWP 314


>gi|163852782|ref|YP_001640825.1| ABC transporter related [Methylobacterium extorquens PA1]
 gi|163664387|gb|ABY31754.1| ABC transporter related [Methylobacterium extorquens PA1]
          Length = 593

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 83/331 (25%), Positives = 137/331 (41%), Gaps = 30/331 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            K L  L       + + +  T   +Y   + +  LIY + A GL+++VG  GL+SL   
Sbjct: 1   MKALYTLGFALLAAILVVVPLTSGNEYELRLFMLFLIYGVIAVGLNVLVGLTGLVSLGQA 60

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +A+GAY+  IL  R+ L + L    +A+++G  G  +  PS++ RG YLA+ T+    
Sbjct: 61  GLFALGAYTGAILAIRFNLDLVLASIGAAVVAGLFGAALAYPSVRVRGVYLAVVTIAFGL 120

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +N+ I+W+ +T G  G+         G  +                    Y VL    
Sbjct: 121 IVENVAIEWQSLTGGTTGLSGIPGPNLFGYPLSG---------------YAFYAVLAITL 165

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           FL+      L+ +    A   +  ++ A  SL       +  AFAV++   G+AG+F+A 
Sbjct: 166 FLATLATHNLKHSGYGRAMLAVAQSETAARSLGIGATRIRTLAFAVAAMTAGIAGSFYAF 225

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               ISPD+F FS+++  + +VILGG  S         IL  + E+              
Sbjct: 226 LNAYISPDIFTFSDSVRFLLMVILGGAASTFGPVVGAFILTYLPEVLQRFAE-------- 277

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                           L  V+      +L  
Sbjct: 278 -------WQKFAYGALLLAVMFGLPGGILGT 301


>gi|296157548|ref|ZP_06840383.1| ABC transporter related protein [Burkholderia sp. Ch1-1]
 gi|295892320|gb|EFG72103.1| ABC transporter related protein [Burkholderia sp. Ch1-1]
          Length = 594

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/327 (15%), Positives = 120/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V    L +        +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   FFWLFLVVLFALPVLPQPIHVPEYWVTLLNYIGLYSIVAIGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IGAY+   L ++YG+S W  + V  +++    +++GL +++  G +L + T+       
Sbjct: 69  GIGAYATAYLTTQYGISPWFALIVGVVVTALIALMLGLVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +    + +     GI     L   G  + S                 +YY++  +   +
Sbjct: 129 YLFGNLEML-GKYDGINGIPVLNVFGINLESGRH--------------IYYLIWVVVLGA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  + 
Sbjct: 174 VISVQNLLNSRPGRAIRALRGGGMMAEAMGVNTAWMRVVIFVYAAVLASISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  +  I  + + ++GG++ +       AIL  + +    +          F  
Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGENGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  I + L++      +  
Sbjct: 292 -----EVIVFGILMVLLLQYARQGVWP 313


>gi|257482382|ref|ZP_05636423.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraE [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|331009787|gb|EGH89843.1| high-affinity branched-chain amino acid ABC transporter permease
           BraE [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 437

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KYI ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W  +P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +F     R        +  +F F  +  +  +F+Y VL  +  
Sbjct: 224 WLSFTGGPNGVPVPSPTFFGLEFGRRAKDGGIPIHEYFGFDYNPDLKFLFIYTVLFLVVL 283

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 395

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  I + L+++ R   L+R
Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417


>gi|291286813|ref|YP_003503629.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809]
 gi|290883973|gb|ADD67673.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809]
          Length = 401

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 99/330 (30%), Positives = 159/330 (48%), Gaps = 26/330 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  VV+ LL  L +    +  Y  ++    L+YV+   GL+IVVG  GLL L  V  YA
Sbjct: 85  ILRIVVFSLLAILCIFPFVTDAYQINILTVALMYVVLGLGLNIVVGLAGLLDLGFVAFYA 144

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY+Y +L   +GLS WLL+PV  ++    G+++G P L+ RGDYLAI TL   EI + 
Sbjct: 145 VGAYTYALLNHYFGLSFWLLLPVGGLMGAVFGVLLGFPVLRLRGDYLAIVTLGFGEIIRL 204

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L  W   + G +GI   DR  F                S     IF+Y++++     + 
Sbjct: 205 VLENWNDFSMGPSGIANIDRPSFF-----------GIDFSLEQSTIFIYFLMVLFTLFTI 253

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L+ + I  AW  +R+++ A  ++       KL AFA+ + + G+ G  FAA    
Sbjct: 254 FFVNRLQNSRIGRAWLALREDEIACQAMGVGRTRTKLMAFALGATWAGLMGVVFAAKTTF 313

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           I+P  F F E+ I++S+V+LGGM S+  +     I+I + E     + Y           
Sbjct: 314 INPASFTFLESAIILSVVVLGGMGSIPGVILGALIMILLPEYLRAFSEY----------- 362

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                  +   A+ ++++ R   L+     
Sbjct: 363 ----RMLVFGGAMVVMMVFRPQGLVSNFRR 388


>gi|302185464|ref|ZP_07262137.1| inner-membrane translocator [Pseudomonas syringae pv. syringae 642]
          Length = 437

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 158/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KYI ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W  +P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +      R        +  +F F  +  +  IF+Y VL  +  
Sbjct: 224 WLSFTGGPNGVPVPAPTFLGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYTVLFLVVL 283

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 395

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  I + L+++ R   L+R
Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417


>gi|283853361|ref|ZP_06370608.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
 gi|283571229|gb|EFC19242.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
          Length = 407

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 89/307 (28%), Positives = 150/307 (48%), Gaps = 17/307 (5%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
           + +Y   + I +L+Y+    GL++VVG  GLL L  +  Y +GAY+Y +L   +GL  W+
Sbjct: 106 TNRYAQDVAINVLVYICLGLGLNVVVGLCGLLDLGYIAFYGVGAYTYALLSIHFGLPFWV 165

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
            +PV A+ +   G I+G P+L+ RGDYLAI TL   EI + +L  W  +T G  G+    
Sbjct: 166 CLPVCALFAAVAGCIIGYPTLRMRGDYLAIVTLGFGEIVRIVLNNWMALTGGPNGLLGIK 225

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                  +       F F    +    ++YYV+L +   +   +  +  + I  A+  IR
Sbjct: 226 APGVYVPSFTDGS--FSFEYLLLRKLEYLYYVILALAVFTIVAVYRINYSRIGRAFEAIR 283

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           +++ A   +       KL A+A+ + F G+AGAFF+A    +SP+ F F E+ +V+++V+
Sbjct: 284 EDETAAELMGVDTFRFKLLAYALGAVFGGLAGAFFSARMRFVSPESFTFIESAMVLAMVV 343

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           LGGM S+  +      L+ + E+  G   Y                      A+  ++L+
Sbjct: 344 LGGMGSIPGVILGALALVALPEVFRGFELY---------------RMLAFGGAMAFMMLV 388

Query: 335 RSHSLLR 341
           R   L  
Sbjct: 389 RPAGLWP 395


>gi|299131697|ref|ZP_07024892.1| inner-membrane translocator [Afipia sp. 1NLS2]
 gi|298591834|gb|EFI52034.1| inner-membrane translocator [Afipia sp. 1NLS2]
          Length = 426

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 118/337 (35%), Positives = 177/337 (52%), Gaps = 19/337 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L+  +  +  FL       Q+Y+  +GI ++ YVM  WGL+IVVG  GLL L  V  YA+
Sbjct: 90  LVVPLLLVFAFLVPVIFYKQRYMLDLGILVMTYVMLGWGLNIVVGLAGLLDLGYVAFYAV 149

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAYSY +L + +GLS W+ +P++ +++   GM++G P L+ RGDYLAI TL   EI + +
Sbjct: 150 GAYSYALLSTTFGLSFWICLPLAGILAAFWGMLLGFPVLRLRGDYLAIVTLAFGEIIRLV 209

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           L+ W+ +T G  GI    R    G  +      L      P S     + ++Y++L +  
Sbjct: 210 LLNWQHVTGGPNGISGIPRPSLFGIPLTAGPNGLAAHLGIPFSPTHRLVLLFYIILALAL 269

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L+  + L LRR  I  AW  +R+++ A  SL       KL+AFA  + F G AGAFFA  
Sbjct: 270 LTNWVTLRLRRLPIGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAGAFFATR 329

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ISP+ F F E+ +V++IV+LGGM S   +  ++  LIG  EL  G   +        
Sbjct: 330 QGFISPESFSFQESALVLAIVVLGGMGSQLGVVLSSLALIGGFELFRGFEQF-------- 381

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
                         A+ L+++ R   L+  R PS FL
Sbjct: 382 -------RMLAFGGAMVLLMIWRPRGLIAHREPSLFL 411


>gi|91785747|ref|YP_560953.1| branched chain amino acid ABC transporter ATPase/inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91689701|gb|ABE32901.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter ATP-binding protein 1,
           HAAT family [Burkholderia xenovorans LB400]
          Length = 594

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/327 (15%), Positives = 120/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V    L +        +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   FFWLFLVVLFALPVLPQPIHVPEYWVTLLNYIGLYSIVAIGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IGAY+   L ++YG+S W  + V  +++    +++GL +++  G +L + T+       
Sbjct: 69  GIGAYATAYLTTQYGISPWFALIVGVVVTALIALMLGLVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +    + +     GI     L   G  + S                 +YY++  +   +
Sbjct: 129 YLFGNLEML-GKYDGINGIPVLNVFGINLESGRH--------------IYYLIWVVVLGA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  + 
Sbjct: 174 VISVQNLLNSRPGRAIRALRGGGMMAEAMGVNTAWMRVVIFVYAAVLASISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  +  I  + + ++GG++ +       AIL  + +    +          F  
Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGENGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + + L++      +  
Sbjct: 292 -----EVIVFGVLMVLLLQYARQGVWP 313


>gi|300703314|ref|YP_003744916.1| leucine/isoleucine/valine ABC transporter subunit inner-membrane
           ABC translocator, membrane component [Ralstonia
           solanacearum CFBP2957]
 gi|299070977|emb|CBJ42286.1| leucine/isoleucine/valine transporter subunit ; Inner-membrane
           translocator, membrane component of ABC superfamily
           [Ralstonia solanacearum CFBP2957]
          Length = 378

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 94/344 (27%), Positives = 153/344 (44%), Gaps = 17/344 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             LL      +   F+       Y   +    L+Y+M A GL+IVVG  GLL L  +  Y
Sbjct: 16  AALLGFFILAIFAPFIVGAVGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAFY 75

Query: 75  AIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           A+GAY   +LGS +                 L IW +IP+ A ++   G+++G P+LK R
Sbjct: 76  AVGAYMMALLGSPHLTNQFEWIHQLFPNGLHLLIWWVIPLGAGLAALFGILLGAPTLKLR 135

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           GDYLAI TL   EI +  +       N   G    + +  +        +          
Sbjct: 136 GDYLAIVTLGFGEIIRIFMNNLDRPVNITNGPKGVNLIEPVKLFGFDFSKRHEIFGIHFE 195

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                YY+ + +     ++ L L+ + I  AW  IR+++ A  ++       KL AFA+ 
Sbjct: 196 PVHMYYYLFVILAMGIITVCLRLQNSRIGRAWVAIREDEIAAKAMGINTRNIKLLAFAMG 255

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           ++F G++GA FA+ +  +SP+ F   E+I +++IV+LGGM  +  +     +L+G  EL 
Sbjct: 256 ASFGGVSGAMFASFQGFVSPESFVLWESIYILAIVVLGGMGHIPGVILGGVLLVGFQELL 315

Query: 299 CGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             +     N L         +    L  +A+  V+L R   L  
Sbjct: 316 RALAEPVQNKLFGHVIVEAEVLRQLLFGLAMVGVMLYRPAGLWP 359


>gi|291295710|ref|YP_003507108.1| ABC transporter-like protein [Meiothermus ruber DSM 1279]
 gi|290470669|gb|ADD28088.1| ABC transporter related protein [Meiothermus ruber DSM 1279]
          Length = 590

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/328 (18%), Positives = 121/328 (36%), Gaps = 21/328 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +V   LL L         +  ++G  I    + A GL ++ G  G+ S        + 
Sbjct: 8   ITLVAVGLLLLLPLLLPPSSFYLTVGNYIAFGALVALGLYLLTGLSGMTSFGQAAFMGLA 67

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  +L    GL+ WL +P+  + +    +++G  + + +G YL ++T+        ++
Sbjct: 68  AYTSALLTIGQGLNPWLTLPLGVLAAVVGAVVLGGITARLKGHYLPLSTIAWCMALYIVM 127

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
             W  +T G  G+     +   G ++                    +Y+      L A  
Sbjct: 128 GSWIELTGGHTGLRGIPSVSVFGWSLNDSR--------------SYFYLAWFFVLLGAWT 173

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L  + I  A R  + +  A  S        KL  F +S+ + G+AG  +   +  I+
Sbjct: 174 AWNLTNSRIGRAMRASKGDAIAAASFGVNPAVLKLQVFVLSAIYAGVAGWLYVHYQKFIN 233

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F    +I  +   + GG+ S+  +   + ++ G+ E+  G+    F           
Sbjct: 234 PTPFSLDASIKYLIAAVAGGVGSIPGVILGSGLVTGLEEVLKGLLPRIFGR-------TG 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTP 345
                   + L L+++     L      
Sbjct: 287 NYEIIAYGLILVLILMFAPKGLWPFLER 314


>gi|330951502|gb|EGH51762.1| inner-membrane translocator [Pseudomonas syringae Cit 7]
          Length = 437

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 158/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KYI ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W  +P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +      R        +  +F F  +  +  IF+Y VL  +  
Sbjct: 224 WLSFTGGPNGVPVPAPTFLGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYAVLFLVVL 283

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 395

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  I + L+++ R   L+R
Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417


>gi|295678146|ref|YP_003606670.1| ABC transporter related protein [Burkholderia sp. CCGE1002]
 gi|295437989|gb|ADG17159.1| ABC transporter related protein [Burkholderia sp. CCGE1002]
          Length = 594

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/327 (15%), Positives = 119/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V    L +        +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   FFWLFLVVLFALPVLPQPIHVPEYWVTLLNYIGLYSIVAIGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IGAY+   L + +G+S WL +    +++    +++GL +++  G +L + T+       
Sbjct: 69  GIGAYATAYLTTNFGVSPWLALIAGVILTALIALMLGLVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +     GI     L  LG  + S                 +YY++  +   +
Sbjct: 129 YLFGNLDML-GKYDGINGIPVLNVLGINLESGRH--------------IYYLIWLVVLGA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  + 
Sbjct: 174 VVSVQNLLNSRPGRAIRALRGGGLMAEAMGVNTGWMRVVIFVYAAVLASVSGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  +  I  + + ++GG++ +       AIL  + +    +          F  
Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGENGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  I + L++      +  
Sbjct: 292 -----EVIVFGIIMVLLLQYARQGVWP 313


>gi|85860151|ref|YP_462353.1| branched-chain amino acid transport system permease [Syntrophus
           aciditrophicus SB]
 gi|85723242|gb|ABC78185.1| branched-chain amino acid transport system permease protein
           [Syntrophus aciditrophicus SB]
          Length = 400

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 93/332 (28%), Positives = 157/332 (47%), Gaps = 26/332 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++    LF  +       Y  S+    L+Y++   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 92  ILVSGGLFALVFPFLFSSYQTSIMTTALLYIVLGLGLNIVVGLAGLLDLGYVAFYAVGAY 151

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L   +G+  W  +P+ A+++   G+I+G P L+ RGDYLAI TL   EI + IL  
Sbjct: 152 TYALLNVHFGVGFWTALPIGALLAACFGVILGFPVLRLRGDYLAIVTLGFGEIIRLILEN 211

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W   + G +GI    R  F                S     I++YY+++ +C  +  ++ 
Sbjct: 212 WNAFSFGPSGISNIPRPGFF-----------GIELSLQNATIYIYYLMIALCLFTILVVN 260

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L+ + I  AW  +R+++ A  ++       KL+AFA+ + + GMAG   AA    I+P 
Sbjct: 261 RLQHSRIGRAWIALREDELACEAMGVDKTRTKLTAFALGATWAGMAGVILAAKTTFINPA 320

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F F E+ +++SIV+LGGM S+  +     +L+ + E       Y               
Sbjct: 321 SFTFLESAMILSIVVLGGMGSIPGVILGALLLMLLPEYLRVFKDY--------------- 365

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
              L    + L+++ R   ++     +   + 
Sbjct: 366 RMLLFGATMVLMMVFRPQGMITAVRRTYQYKE 397


>gi|169837102|ref|ZP_02870290.1| permease of ABC transporter for branched-chain amino acids
           [candidate division TM7 single-cell isolate TM7a]
          Length = 373

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 76/344 (22%), Positives = 135/344 (39%), Gaps = 48/344 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K      LL +V+  +L           Y   + I ILIYV+F+  L+I VG +G L+L 
Sbjct: 47  KNYVATFLLIIVFYFVLSFTFNPNDPFSYTKGIYINILIYVLFSVSLNITVGLMGQLNLG 106

Query: 70  CVIAYAIGAYSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
                AIG YS   +            L + L+     +++   G ++G  +L+ RGDYL
Sbjct: 107 QAGFIAIGGYSAAFISKILASYNLPPFLQLILVSLFGGLVAAVFGFLVGGSTLRLRGDYL 166

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           AI TL   EI + I+     +  G  G+     L     T   ++      +  +     
Sbjct: 167 AIITLAFGEIVKYIIQNLDFL-GGATGLSNIPPLLSFSNTYFIVVISIVIIAMAMT---- 221

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
                                +       +IR+++ A  ++   +   KL  FA S+ F 
Sbjct: 222 ---------------------SRKGKEILSIREDEIAAENIGIGLNRVKLYGFAFSAFFA 260

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+ G+ FA +   ++PD F F  +I ++ +V+LGG+ S++    A  IL  + E    + 
Sbjct: 261 GVGGSLFAHNVGILTPDKFGFLFSIEILVMVVLGGLGSITGAIVAAVILTLLNEKLRDV- 319

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                         +     +  I L  +++ R   +   +  +
Sbjct: 320 --------------SQFRYLVYAIILISLMIFRPKGIFGTKEFT 349


>gi|17547158|ref|NP_520560.1| amino-acid transmembrane ABC transporter protein [Ralstonia
           solanacearum GMI1000]
 gi|17429460|emb|CAD16146.1| probable amino-acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 378

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 95/344 (27%), Positives = 153/344 (44%), Gaps = 17/344 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             LL      +   FL       Y   +    L+Y+M A GL+IVVG  GLL L  +  Y
Sbjct: 16  AALLGFFVLAIFAPFLVGAVGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAFY 75

Query: 75  AIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           A+GAY   +LGS +                 L IW +IP+ A ++   G+++G P+LK R
Sbjct: 76  AVGAYMMALLGSPHLTNQFEWIHQLFPNGLHLLIWWVIPLGAGLAALFGILLGAPTLKLR 135

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           GDYLAI TL   EI +  +       N   G    + +  +        +          
Sbjct: 136 GDYLAIVTLGFGEIIRIFMNNLDRPVNITNGPKGVNLIEPVKLFGFDFSKRHDIFGIHFE 195

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                YY+ + +     ++ L L+ + I  AW  IR+++ A  ++       KL AFA+ 
Sbjct: 196 PVHMYYYLFVLLAMGIITVCLRLQNSRIGRAWVAIREDEIAAKAMGINTRNIKLLAFAMG 255

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           ++F G++GA FA+ +  +SP+ F   E+I +++IV+LGGM  +  +     +L+G  EL 
Sbjct: 256 ASFGGVSGAMFASFQGFVSPESFVLWESIYILAIVVLGGMGHIPGVILGGILLVGFQELL 315

Query: 299 CGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             +     N L         +    L  +A+  V+L R   L  
Sbjct: 316 RALAEPIQNKLFGHVIVEAEVLRQLLFGLAMVGVMLYRPAGLWP 359


>gi|170694307|ref|ZP_02885461.1| ABC transporter related [Burkholderia graminis C4D1M]
 gi|170140730|gb|EDT08904.1| ABC transporter related [Burkholderia graminis C4D1M]
          Length = 594

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 124/335 (37%), Gaps = 24/335 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R+ K       L V++ L +          +Y  ++   I +Y + A GL ++ G  G+ 
Sbjct: 3   RIMKNKFFWLFLVVLFALPVLPR--PIHVPEYWVTLLNYIGLYSIVAIGLVLLTGIGGMT 60

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S        IGAY+   L +R+G+S WL +    +++    +I+GL +++  G +L + T
Sbjct: 61  SFGQAAFVGIGAYATAYLTTRFGVSPWLALIAGVLVTALIALILGLVTMRLSGHFLPLGT 120

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           +        +    + +     GI     L   G  + S                 +YY+
Sbjct: 121 IAWGLSLFYLFGNLEML-GKYDGINGIPVLNVFGIDLESGRH--------------IYYL 165

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +   +   +  L  +    A R +R       ++     + ++  F  ++    ++G
Sbjct: 166 IWLVVLGAVVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTAWMRVVIFVYAAVLASVSG 225

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             +A  +  ++P  F  +  I  + + ++GG++ +       AIL  + +    +     
Sbjct: 226 FLYAHLQRAVNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLL 285

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                F          +  I + L++      +  
Sbjct: 286 GENGNF-------EVIVFGILMVLLLQYARQGVWP 313


>gi|33597866|ref|NP_885509.1| putative branched-chain amino acid transport system protein
           [Bordetella parapertussis 12822]
 gi|33602769|ref|NP_890329.1| putative branched-chain amino acid transport system protein
           [Bordetella bronchiseptica RB50]
 gi|33574295|emb|CAE38628.1| putative branched-chain amino acid transport system protein
           [Bordetella parapertussis]
 gi|33577211|emb|CAE35768.1| putative branched-chain amino acid transport system protein
           [Bordetella bronchiseptica RB50]
          Length = 612

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 125/325 (38%), Gaps = 22/325 (6%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            L + + ++L      + + ++  +    I +  M A GL ++ G  GL S        +
Sbjct: 4   FLLIAFIVVLAGLPLLSATPEFWITQLNYIGLAAMVALGLVLLTGVGGLTSFGQAAFVGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +L ++Y +S WL +PV  +++     ++GL +L+  G YL + T+        +
Sbjct: 64  GAYTTALLTTQYDISPWLALPVGLLVTAVVAFLLGLITLRLSGHYLPLGTIAWGLSLYYL 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                 +     GI   + +   G ++ S                 +YY++     L+  
Sbjct: 124 FGNLDWL-GKHDGIAGIEPISLFGWSLASGRH--------------IYYLIWVFVLLALW 168

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               L  +    A R ++       S+       K+  F  ++    ++G  +A  +  +
Sbjct: 169 ATRNLLDSRPGRAIRALKSGAGMAESMGVNTGIYKIVIFVWAALLACLSGWLYAHMQRAV 228

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP  F  +  I  + + ++GG   +      +A+++G+ +    +     ++   F    
Sbjct: 229 SPSPFGLNYGIEYLFMAVVGGAGHVWGALLGSAVILGIKDQLQNILPKLIDTNANF---- 284

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                    + + LV+   S+ L  
Sbjct: 285 ---ELIFFGVLMILVLQYASNGLWP 306


>gi|83746665|ref|ZP_00943714.1| LivM [Ralstonia solanacearum UW551]
 gi|207721435|ref|YP_002251876.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|207742585|ref|YP_002258977.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83726618|gb|EAP73747.1| LivM [Ralstonia solanacearum UW551]
 gi|206586594|emb|CAQ17181.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206593979|emb|CAQ60906.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 378

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 94/344 (27%), Positives = 153/344 (44%), Gaps = 17/344 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             LL      +   F+       Y   +    L+Y+M A GL+IVVG  GLL L  +  Y
Sbjct: 16  AALLGFFILAIFAPFIVGAVGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAFY 75

Query: 75  AIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           A+GAY   +LGS +                 L IW +IP+ A ++   G+++G P+LK R
Sbjct: 76  AVGAYMMALLGSPHLTNQFEWIHQLFPNGLHLLIWWVIPLGAGLAALFGILLGAPTLKLR 135

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           GDYLAI TL   EI +  +       N   G    + +  +        +          
Sbjct: 136 GDYLAIVTLGFGEIIRIFMNNLDRPLNITNGPKGVNLIEPVKLFGFDFSKRHEIFGIHFE 195

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                YY+ + +     ++ L L+ + I  AW  IR+++ A  ++       KL AFA+ 
Sbjct: 196 PVHMYYYLFVILAMGIITVCLRLQNSRIGRAWVAIREDEIAAKAMGINTRNIKLLAFAMG 255

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           ++F G++GA FA+ +  +SP+ F   E+I +++IV+LGGM  +  +     +L+G  EL 
Sbjct: 256 ASFGGVSGAMFASFQGFVSPESFVLWESIYILAIVVLGGMGHIPGVILGGVLLVGFQELL 315

Query: 299 CGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             +     N L         +    L  +A+  V+L R   L  
Sbjct: 316 RALAEPVQNKLFGHVIVEAEVLRQLLFGLAMVGVMLYRPAGLWP 359


>gi|302336889|ref|YP_003802095.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
 gi|301634074|gb|ADK79501.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
          Length = 419

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 90/319 (28%), Positives = 154/319 (48%), Gaps = 26/319 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
              S  Y  ++    L+ VM   GL+IVVG  G+L L  +  YA+GAY+Y +L   +G++
Sbjct: 117 PFISSMYQTNIISTALLSVMLGMGLNIVVGLGGMLHLGYIAFYAVGAYTYALLNYHFGVN 176

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            W+ +P+  + S   G+++G+P L+ +GDYLAI TL   EI + +L  W   + G +GI 
Sbjct: 177 FWVALPLGGLFSMIFGILLGIPVLRLKGDYLAIVTLGFGEIIRIVLENWNEFSFGPSGIA 236

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              R  F                S     IF Y++L+ +   +  I+  L+ + +  AW 
Sbjct: 237 NIPRPGFF-----------GVKLSIQHASIFTYFILIALVIFTIFIVSRLKNSRLGRAWE 285

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R++  A  ++   I  AK++AFA+ + + G+AG  FA+    I+P  F   E+I+V+ 
Sbjct: 286 AMREDDIACEAMGVDITKAKMTAFALGAFWAGLAGVVFASKTTFINPASFTMWESIVVLC 345

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           IV+LGGM SL  +     +++ + E     + Y                  L    L ++
Sbjct: 346 IVVLGGMGSLGGVVIGALLIVLLPEYLRAFSEY---------------RMLLFGAVLVVM 390

Query: 332 ILMRSHSLLRLRTPSNFLE 350
           ++ R   L++ R      E
Sbjct: 391 MIFRPEGLIQARRHVFTFE 409


>gi|313500847|gb|ADR62213.1| Inner-membrane translocator [Pseudomonas putida BIRD-1]
          Length = 433

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 99/329 (30%), Positives = 158/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 106 IIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 165

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 166 GLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 225

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+      +F     R        +  FF F  +  +  +F+Y VL  +  
Sbjct: 226 WLSFTGGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNASLKFVFIYAVLFIVVL 285

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  +  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA  
Sbjct: 286 TVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATY 345

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 346 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 397

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  + + L+++ R   L+R
Sbjct: 398 -------RVLLFGVLMVLMMIWRPRGLIR 419


>gi|186477787|ref|YP_001859257.1| ABC transporter-like protein [Burkholderia phymatum STM815]
 gi|184194246|gb|ACC72211.1| ABC transporter related [Burkholderia phymatum STM815]
          Length = 594

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/327 (15%), Positives = 120/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  L +V    L +     +  +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   LFWLFLVVMFALPVLPQPIRVPEYWVTLLNYIGLYSIVAIGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY+   L ++ G+S WL +    +++    +++G  +++  G +L + T+       
Sbjct: 69  GVGAYTTAYLTTQLGVSPWLALIAGVVLTALIALLLGAVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +    + +     GI     L  LG  + S                 +YY++  +   +
Sbjct: 129 FLFGNMEML-GKYDGINGIPVLNVLGVNLESGRH--------------IYYLIWIVVLGA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  + 
Sbjct: 174 VVSVQNLLNSRPGRAIRALRGGGLMAEAMGVNTAWMRVVIFVYAAVLAAISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  +  I  + + ++GG+  +       AIL  + +    +          F  
Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVAHVWGAVLGAAILTVLQDYLQTLLPKLLGENGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  I + L++      +  
Sbjct: 292 -----EIIVFGILMVLLLQYARQGVWP 313


>gi|300313405|ref|YP_003777497.1| branched-chain amino acid ABC transporter ATP-binding
           protein/permease [Herbaspirillum seropedicae SmR1]
 gi|300076190|gb|ADJ65589.1| ABC-type branched-chain amino acid transport system, composite
           ATP-binding/permease components protein [Herbaspirillum
           seropedicae SmR1]
          Length = 596

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/335 (14%), Positives = 113/335 (33%), Gaps = 22/335 (6%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
                    + L L       +  ++   + +Y + A GL ++ G  GL+S        +
Sbjct: 9   AALPALFFAIVLALPQLGLPPFWVTLLSYVGLYAIVALGLVLLTGVAGLISFGQAAFVGM 68

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+   L +++GLS W+ +     ++     ++G  +++  G YL ++T+        +
Sbjct: 69  GAYTTAYLTTQFGLSPWIGLLAGIALTACSAFLIGSLTMRISGHYLPLSTIAWGLSLYYL 128

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
               + +     GI     +        +                 MY ++  +  L+  
Sbjct: 129 FGNLEML-GKHDGINGIPVITIGSVEFGN--------------GASMYLLIWVVLILALV 173

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            ++    +    A R +R       ++       K+  F  ++   G++G  +A  +  +
Sbjct: 174 SVVNFLDSRAGRAVRALRFGTVMPEAMGVDTARLKIVIFVYAAVLAGISGWLYAHLQQAV 233

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +P  F     I  + +V++GG   ++       +L  +             +   F    
Sbjct: 234 NPTPFGLKYGIDYLLMVVVGGAGHVAGAILGAGLLAVLSNFLQEWLPGVLGTGGNF---- 289

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 +  IAL + +   +  L           R
Sbjct: 290 ---EAIVFGIALVIFLQFANEGLWPRLQARFGRRR 321


>gi|206558426|ref|YP_002229186.1| putative branched-chain amino acid ABC transporter ATP-binding
           membrane protein [Burkholderia cenocepacia J2315]
 gi|198034463|emb|CAR50328.1| putative branched-chain amino acid ABC transporter ATP-binding
           membrane protein [Burkholderia cenocepacia J2315]
          Length = 594

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 124/326 (38%), Gaps = 22/326 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + +V    L +  GA +  +Y  ++   I +Y + A GL ++ G  G+ S        
Sbjct: 10  FWVFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY+   L +RYG+S WL + V  +++    +++G  +++  G +L + T+        
Sbjct: 70  IGAYATAFLTTRYGVSPWLALIVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +    + +     GI     L   G  + S                 +Y+++  +   + 
Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGIELES--------------GRSLYFLIWAVVLAAI 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  +  
Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P  F  +  I  + + ++GG++ +       AIL  + +    +      S   F   
Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  +  + + L++      +  
Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313


>gi|299065964|emb|CBJ37145.1| leucine/isoleucine/valine transporter subunit ; Inner-membrane
           translocator, membrane component of ABC superfamily
           [Ralstonia solanacearum CMR15]
          Length = 378

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 94/344 (27%), Positives = 153/344 (44%), Gaps = 17/344 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             LL      +   FL       Y   +    L+Y+M A GL+IVVG  GLL L  +  Y
Sbjct: 16  AALLGFFVLAIFAPFLVGAVGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAFY 75

Query: 75  AIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           A+GAY   +LGS +                 L IW ++P+ A ++   G+++G P+LK R
Sbjct: 76  AVGAYMMGLLGSPHLSNQFEWIHQLFPHGLHLLIWWVVPLGAGLAALFGILLGAPTLKLR 135

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           GDYLAI TL   EI +  +       N   G    + +  +        +          
Sbjct: 136 GDYLAIVTLGFGEIIRIFMNNLDRPLNITNGPKGINLIEPVKLFGFDFSKRHDIFGIHFE 195

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                YY+ + +     ++ L L+ + I  AW  IR+++ A  ++       KL AFA+ 
Sbjct: 196 PVHMYYYLFVLLAMGIITVCLRLQNSRIGRAWVAIREDEIAAKAMGINTRNIKLLAFAMG 255

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           ++F G++GA FA+ +  +SP+ F   E+I +++IV+LGGM  +  +     +L+G  EL 
Sbjct: 256 ASFGGVSGAMFASFQGFVSPESFVLWESIYILAIVVLGGMGHIPGVILGGILLVGFQELL 315

Query: 299 CGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             +     N L         +    L  +A+  V+L R   L  
Sbjct: 316 RALAEPIQNKLFGHVIVEAEVLRQLLFGLAMVGVMLYRPAGLWP 359


>gi|307731472|ref|YP_003908696.1| ABC transporter-like protein [Burkholderia sp. CCGE1003]
 gi|307586007|gb|ADN59405.1| ABC transporter related protein [Burkholderia sp. CCGE1003]
          Length = 594

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 51/327 (15%), Positives = 119/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V    L +        +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   FFWLFLVVLFALPVLPQPIHVPEYWVTLLNYIGLYAIVAIGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IGAY+   L +R+G+S W  +    +++    +++GL +++  G +L + T+       
Sbjct: 69  GIGAYATAYLTTRFGVSPWFALIAGVLLTALIALVLGLVTMRLSGHFLPLGTIAWGLSLF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +    + +     GI     L   G  + S                 +YY++  +   +
Sbjct: 129 YLFGNLEML-GKYDGINGIPVLNVFGIDLESGRH--------------IYYLIWLVVLGA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  + 
Sbjct: 174 VVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTAWMRVVIFVYAAVLASVSGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  +  I  + + ++GG++ +       AIL  + +    +          F  
Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGENGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  I + L++      +  
Sbjct: 292 -----EVIVFGILMVLLLQYARQGVWP 313


>gi|73542412|ref|YP_296932.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72119825|gb|AAZ62088.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 385

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 92/345 (26%), Positives = 154/345 (44%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +  LL  +   L   F   T    Y   +    L+Y+M A GL+IVVG  GLL L  +  
Sbjct: 22  LAALLGFLVIALCAPFFVQTLGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAF 81

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY   +LGS +                 LS+W ++P++ +++   G+++G P+LK 
Sbjct: 82  YAVGAYMMALLGSPHLANQFEWIHQLFPHGLHLSMWWVLPLAVLVAATFGVLLGAPTLKL 141

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +        +         
Sbjct: 142 RGDYLAIVTLGFGEIIRIFMNNLDRPLNITNGPKGITAVDPVHIFGFDFSKTHEIFGLKF 201

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+L+ +  +   + L L+ + I  A+  IR+++ A  ++       KL AFA+
Sbjct: 202 SPVFMYYYLLVFLVIVIVFVCLRLQNSRIGRAFVAIREDEIAAKAMGINTRNIKLLAFAM 261

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G +GA F A +  +SP+ F   E+I +++IV+LGGM  +  +     +L+G  EL
Sbjct: 262 GASFGGASGAVFGAFQGFVSPESFTLWESIYILAIVVLGGMGHIPGVILGGILLVGFQEL 321

Query: 298 CCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              +       +         +    L  +AL  V+L R   +  
Sbjct: 322 LRVVAEPIQTGIFGHVIVDAEVLRQLLFGLALVGVMLYRPAGIWP 366


>gi|206576552|ref|YP_002237859.1| hydrophobic amino acid ABC transporter, permease protein
           [Klebsiella pneumoniae 342]
 gi|206565610|gb|ACI07386.1| hydrophobic amino acid ABC transporter, permease protein
           [Klebsiella pneumoniae 342]
          Length = 428

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 100/339 (29%), Positives = 161/339 (47%), Gaps = 22/339 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++        + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 101 IMPLLVVLAIAFPFLASKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 160

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P+ A+++   G ++G P L+  GDYLAI TL   EI + +L  
Sbjct: 161 GLALGYQYLGLGFWAMLPLGAVMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 220

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V     F     R        +  FF    +  +  IF+Y VL  +  
Sbjct: 221 WVSFTGGPNGVPVPSPTLFGLEFTRRARDGGIPIHEFFHVSYNPNLKFIFLYAVLCLVVM 280

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   +   L R  I  AW  +R+++ A  ++    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 281 LVLLVKHRLTRMPIGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGIAGVFFASY 340

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL  G + Y        
Sbjct: 341 QGFVNPTSFTFFESALILAIVVLGGMGSTLGVVLAAFVLTVTPELLRGFDEY-------- 392

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                     L  + + ++++ R   L+R       L +
Sbjct: 393 -------RVLLFGVLMVVMMIWRPRGLVRTSRSGVTLRK 424


>gi|161523271|ref|YP_001578283.1| ABC transporter-like protein [Burkholderia multivorans ATCC 17616]
 gi|189351956|ref|YP_001947584.1| branched-chain amino acid transporter ATP-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|160340700|gb|ABX13786.1| ABC transporter related [Burkholderia multivorans ATCC 17616]
 gi|189335978|dbj|BAG45048.1| branched-chain amino acid transport system ATP-binding protein
           [Burkholderia multivorans ATCC 17616]
          Length = 594

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 121/326 (37%), Gaps = 22/326 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               +V    L +  GA    +Y  ++   I +Y + A GL ++ G  G+ S        
Sbjct: 10  FWAFLVVLFALPVLPGALHVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY+   L +RYG+S WL + V   ++    +++G  +++  G +L + T+        
Sbjct: 70  VGAYATAFLTTRYGVSPWLALIVGVALTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +    + +     GI     L   G  + S                 +Y+++  +   + 
Sbjct: 130 LFGNLEVL-GKYDGINGIPALSLFGLELDS--------------GRSLYFLIWAVVLAAI 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  +  
Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P  F  +  I  + + ++GG++ +       AIL  + +    +      S   F   
Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  +  + + L++      +  
Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313


>gi|323527854|ref|YP_004230007.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
 gi|323384856|gb|ADX56947.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
          Length = 594

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 124/335 (37%), Gaps = 24/335 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R+ K       L V++ L +          +Y  ++   I +Y + A GL ++ G  G+ 
Sbjct: 3   RIMKNRFFWLFLVVLFALPVLP--QPIHVPEYWVTLLNYIGLYSIVAIGLVLLTGIGGMT 60

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S        IGAY+   L +R+G+S WL +    +++    +I+GL +++  G +L + T
Sbjct: 61  SFGQAAFVGIGAYATAYLTTRFGVSPWLALIAGVLVTALIALILGLVTMRLSGHFLPLGT 120

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           +        +    + +     GI     L   G  + S                 +YY+
Sbjct: 121 IAWGLSLFYLFGNLEML-GKYDGINGIPVLNVFGIDLESGRH--------------IYYL 165

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +   +   +  L  +    A R +R       ++     + ++  F  ++    ++G
Sbjct: 166 IWLVVMGAVVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTAWMRVVIFVYAAVLASVSG 225

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             +A  +  ++P  F  +  I  + + ++GG++ +       AIL  + +    +     
Sbjct: 226 FLYAHLQRAVNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLL 285

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                F          +  I + L++      +  
Sbjct: 286 GENGNF-------EVIVFGILMVLLLQYARQGVWP 313


>gi|170749306|ref|YP_001755566.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831]
 gi|170655828|gb|ACB24883.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831]
          Length = 852

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 68/337 (20%), Positives = 120/337 (35%), Gaps = 41/337 (12%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LR ++         +V P  L        +          ++I+ +   GL+I+VG  GL
Sbjct: 19  LRESRQLWAALAALIVLPFALDAIGLTLIT-------ATDVVIFALAVLGLNILVGWTGL 71

Query: 66  LSLNCVIAYAIGAYSYVI-LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            S      + IGAY+  I     +   + L +  +  I+G   +  G   L+ RG Y ++
Sbjct: 72  TSFGHGAWFGIGAYAVAILQTRLFPGDMALPLLGALAITGCAALAAGGLILRRRGVYFSL 131

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL  + +   I  +W  +T G+ GI    R                   + +      Y
Sbjct: 132 LTLAFTAMLYAIAFRWTDLTGGENGIGNLHR------------------WAALQEPGAYY 173

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             + G+ F     +   RR+ +      IR+N++    L       KL+AF +S+   G+
Sbjct: 174 AAVSGIAFAVLIALWRFRRSPMGTVLVAIRENEQRAGFLGYATNRYKLAAFVISATITGL 233

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA  A S    S D    + +  ++++V++GGM S    A      I   E        
Sbjct: 234 AGALAAYSHRFTSADPISIAFSGELLAMVVIGGMRSFLGPALGALFYILFREFLSIYTAD 293

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +                    +     I+     L+ 
Sbjct: 294 W---------------LLYFGLLFVAFIVFSPDGLVG 315


>gi|119869096|ref|YP_939048.1| inner-membrane translocator [Mycobacterium sp. KMS]
 gi|119695185|gb|ABL92258.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Mycobacterium sp. KMS]
          Length = 426

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 78/354 (22%), Positives = 146/354 (41%), Gaps = 23/354 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
            R+ K+     +   +  L +F                 Q  +  + A GL++VVG  GL
Sbjct: 56  TRVQKWVVGAVVFLAIGLLPIFTPSWLDTPGISFGGTMAQFAMVAIIAIGLNVVVGQAGL 115

Query: 66  LSLNCVIAYAIGAYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMG 111
           L L  V  YA+GAY+  +L S                  +    +P++  ++   G+I+G
Sbjct: 116 LDLGYVGFYAVGAYTVALLTSPSSPWNQAGPGGWFTTDWAWLACVPLAMAVTALAGLILG 175

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
            P+L+ RGDYLAI TL   EI + +      +TNG  G+   +      +       F R
Sbjct: 176 TPTLRLRGDYLAIVTLGFGEIIRLLADNLSDVTNGPRGLNEVEYPRVGESERLPEGVFSR 235

Query: 172 FPSSF-VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
             S+    Y  + +++ L +      ++  L R+ +  AW  +R+++ A   +       
Sbjct: 236 ANSTGEANYGTWWFWLGLLLIVGILLLVGNLERSRVGRAWVAVREDEDAAEVMGVNTFRF 295

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           KL AF + +A  G++GA +A     ++P  F    +++ +  V+LGG  +   +     I
Sbjct: 296 KLWAFVIGAAIGGLSGALYAGQVQYVAPPTFNIINSMLFLCAVVLGGQGNKLGVIFGAFI 355

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           ++ +     G++F           +          +AL ++++ R   L   R 
Sbjct: 356 IVYLPNRLLGVHF--------LGINLGDLKYLFFGLALVVLMIFRPQGLFPARQ 401


>gi|316932907|ref|YP_004107889.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315600621|gb|ADU43156.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 442

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 116/338 (34%), Positives = 181/338 (53%), Gaps = 19/338 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++A    +   L       Q+YI  +GI +L YVM  WGL+IVVG  GLL L  V  YA+
Sbjct: 105 IVAPALLVFTVLVPVLFYDQRYILDLGILVLTYVMLGWGLNIVVGLAGLLDLGYVAFYAV 164

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAYSY +L + +GLS W+ +P++ +++   G+I+G P L+ RGDYLAI TL   EI + +
Sbjct: 165 GAYSYALLATNFGLSFWICLPLAGILAAFWGVILGFPVLRLRGDYLAIVTLAFGEIIRLV 224

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIR----FFRFPSSFVIYEIFMYYVLLGMCF 192
           +I W+ +T G  GI    R    G  +             P S     +F++Y++L +  
Sbjct: 225 IINWQTLTGGPNGISGIPRPTVFGIPLTPGENGLAAMLGIPFSPSQRLVFLFYLILILAL 284

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           ++    + LRR  I  AW  +R+++ A  +L       KL+AFA+ + F G AGAFFA  
Sbjct: 285 ITNWATIRLRRLPIGRAWEALREDEVACRALGINTTTTKLTAFAIGAMFGGFAGAFFATR 344

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ISP+ F F E+ +V++IV+LGGM S   +A A   LIG  EL  G++ +        
Sbjct: 345 QGFISPESFTFQESALVLAIVVLGGMGSQLGVALAAVTLIGGFELFRGLDQF-------- 396

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                     +  +A+ L+++ R   L+  R P+ +L+
Sbjct: 397 -------RMLVFGMAMVLLMIWRPRGLIGHRAPTVYLQ 427


>gi|144898541|emb|CAM75405.1| ABC-type branched-chain amino acid transport system, permease
           component [Magnetospirillum gryphiswaldense MSR-1]
          Length = 422

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 114/350 (32%), Positives = 169/350 (48%), Gaps = 23/350 (6%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           ++ K    +                + + +      +LIYVM  WGL+IVVG  GLL L 
Sbjct: 84  RFPKARLYVGWGLAGFAIALPFLPFADRSLVDKATLVLIYVMLGWGLNIVVGLAGLLDLG 143

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
            V  YA+GAYSY +L ++  LS WL +P++ + +   G+ +G P L+ RGDYLAI TL  
Sbjct: 144 FVAFYAVGAYSYALLATKLDLSFWLCLPLAGLFAAGFGVALGFPVLRLRGDYLAIVTLGF 203

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEI 181
            EI + IL  W+  TNG AGI    R    G T          +   +F    S     I
Sbjct: 204 GEIIRVILQNWQDFTNGPAGISAIPRPTLFGLTFTANAPAGKTTFADYFGLDFSGDHRVI 263

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
           F+Y+V+L +   +    L +RR  I  AW  +R+++ A  SL       KLSAFA  + F
Sbjct: 264 FLYFVILALALFTNLFTLRIRRLPIGRAWEALREDEIACRSLGLNPTTIKLSAFATGAMF 323

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G AG+FFA  +  ISP+ F F E+ ++++IV+LGGM S   +  A  +L+G+ E    +
Sbjct: 324 AGFAGSFFATRQGFISPESFTFIESAVILAIVVLGGMGSQIGVVLAALLLVGLPEWFREL 383

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             Y                      A+ L++L +   LL  R P+  L +
Sbjct: 384 QQY---------------RMLAFGGAMVLIMLWKPSGLLSHRAPTIRLGK 418


>gi|115523668|ref|YP_780579.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115517615|gb|ABJ05599.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 444

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 116/334 (34%), Positives = 179/334 (53%), Gaps = 19/334 (5%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +     FL       Q+Y+  +GI +L YVM  WGL+IVVG  GLL L  V  YA+GAYS
Sbjct: 111 LLLGFTFLVPVIFYEQRYLLDLGILVLTYVMLGWGLNIVVGLAGLLDLGYVAFYAVGAYS 170

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L + + LS W+ +P++ +++   G+++G P L+ RGDYLAI TL   EI + ++I W
Sbjct: 171 YALLATNFDLSFWVCLPLAGILAAFWGVLLGFPVLRLRGDYLAIVTLAFGEIIRLVIINW 230

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIR----FFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           + +T G  G+    R    G  +               S     +F++Y++L +  L+  
Sbjct: 231 QSLTGGPNGVSGIPRPTLFGIPLTPGDDGLAALLGIEFSPTHRIVFLFYLILALALLTNW 290

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           + + LRR  I  AW  +R+++ A  +L   I   KLSAF++ + F G AGAFFA  +  I
Sbjct: 291 VTIRLRRLPIGRAWEAMREDEVACRALGINITTTKLSAFSIGAMFGGFAGAFFATRQGFI 350

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP+ F F E+ +V++IV+LGGM S   +A A   LIG  EL  G++ Y            
Sbjct: 351 SPESFTFQESALVLAIVVLGGMGSQLGVALAALTLIGGFELFRGLDQY------------ 398

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                 +   A+ L+++ R   L+  R+P+ FLE
Sbjct: 399 ---RMLVFGFAMVLLMIWRPRGLIGHRSPTVFLE 429


>gi|319779523|ref|YP_004130436.1| Branched-chain amino acid transport system permease protein LivM
           [Taylorella equigenitalis MCE9]
 gi|317109547|gb|ADU92293.1| Branched-chain amino acid transport system permease protein LivM
           [Taylorella equigenitalis MCE9]
          Length = 410

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 96/329 (29%), Positives = 156/329 (47%), Gaps = 23/329 (6%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
           F+      +    +   +LIYVM   GL+IVVG  GLL L  V  YA+GAY+Y +L   +
Sbjct: 95  FVWPFFGNRVSVDIATLVLIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGAYTYALLFYYF 154

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
             S W  +P++ + +   G ++G P L+ RGDYLAI TL   EI + +LI    IT G  
Sbjct: 155 DWSFWQALPLAGVFAAGFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLLINLVSITRGPD 214

Query: 149 GIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           GI    +    G  +        ++  +   +    +   I++Y + L +  L+  +   
Sbjct: 215 GISSIPKPSVFGYPMLRRAPEGQQTFHQLMGWKFDSMDPVIYLYLLALVLAILTLLLSNR 274

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L R  +  AW  +R+++ A  SL       KLSAF + +   G AGAFFAA +  ++P+ 
Sbjct: 275 LLRMPVGRAWEALREDEIACKSLGLNPTKIKLSAFTLGAICAGFAGAFFAARQGLVNPEA 334

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F F E+ ++++IV+LGGM S   +  A  IL  + EL      Y                
Sbjct: 335 FTFMESAMILAIVVLGGMGSQIGVIFAAIILTVLPELARQFAEY---------------R 379

Query: 321 TTLMVIALFLVILMRSHSLLRLRTPSNFL 349
             +  + + L+++ R   L  ++ P   +
Sbjct: 380 MLIFGLVMVLMMIWRPQGLFPVKRPHVEV 408


>gi|221214303|ref|ZP_03587275.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           multivorans CGD1]
 gi|221165958|gb|EED98432.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           multivorans CGD1]
          Length = 594

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 121/326 (37%), Gaps = 22/326 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               +V    L +  GA    +Y  ++   I +Y + A GL ++ G  G+ S        
Sbjct: 10  FWAFLVVLFALPVLPGALHVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY+   L +RYG+S WL + V   ++    +++G  +++  G +L + T+        
Sbjct: 70  VGAYATAFLTTRYGVSPWLALIVGVALTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +    + +     GI     L   G  + S                 +Y+++  +   + 
Sbjct: 130 LFGNLEVL-GKYDGINGIPALSLFGLELDS--------------GRSLYFLIWAVVLAAI 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  +  
Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P  F  +  I  + + ++GG++ +       AIL  + +    +      S   F   
Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  +  + + L++      +  
Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313


>gi|254239430|ref|ZP_04932752.1| branched-chain amino acid transport protein BraE [Pseudomonas
           aeruginosa 2192]
 gi|126192808|gb|EAZ56871.1| branched-chain amino acid transport protein BraE [Pseudomonas
           aeruginosa 2192]
          Length = 417

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 100/328 (30%), Positives = 160/328 (48%), Gaps = 24/328 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               + +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAY+Y +L    G 
Sbjct: 105 WPFFASRGAVDIATLILIYVMLGIGLNIVVGLAGLLDLGYVGFYAVGAYTYALLAEYAGF 164

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ M++   G ++G P L+ RGDYLAI TL   EI + +L     IT G  GI
Sbjct: 165 GFWTALPIAGMMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRNMTEITGGPNGI 224

Query: 151 YVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
               +    G T         ++   FF    +     I +Y V L +  L+  +I  L 
Sbjct: 225 GSIPKPTLFGLTFERRAPEGMQTFHEFFGIAYNTNYKVILLYVVALLLVLLALFVINRLM 284

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R  I  AW  +R+++ A  +L       KLSAF + ++F G AG+FFAA +  ++P+ F 
Sbjct: 285 RMPIGRAWEALREDEVACRALGLNPTIVKLSAFTIGASFAGFAGSFFAARQGLVTPESFT 344

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F E+ ++++IV+LGGM S   +  A  +++ + E+                  FN     
Sbjct: 345 FIESAMILAIVVLGGMGSQLGVILAAVVMVLLQEM----------------RGFNEYRML 388

Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLE 350
           +  + + ++++ R   LL ++ P   L+
Sbjct: 389 IFGLTMIVMMIWRPQGLLPMQRPHLELK 416


>gi|221202193|ref|ZP_03575228.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           multivorans CGD2M]
 gi|221208746|ref|ZP_03581745.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           multivorans CGD2]
 gi|221171378|gb|EEE03826.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           multivorans CGD2]
 gi|221177987|gb|EEE10399.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           multivorans CGD2M]
          Length = 594

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 121/326 (37%), Gaps = 22/326 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               +V    L +  GA    +Y  ++   I +Y + A GL ++ G  G+ S        
Sbjct: 10  FWAFLVVLFALPVLPGALHVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY+   L +RYG+S WL + V   ++    +++G  +++  G +L + T+        
Sbjct: 70  VGAYATAFLTTRYGVSPWLALIVGVALTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +    + +     GI     L   G  + S                 +Y+++  +   + 
Sbjct: 130 LFGNLEVL-GKYDGINGIPALSLFGLELDS--------------GRSLYFLIWAVVLAAI 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  +  
Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P  F  +  I  + + ++GG++ +       AIL  + +    +      S   F   
Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  +  + + L++      +  
Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313


>gi|39934861|ref|NP_947137.1| putative branched-chain amino acid transport system ATP-binding
           protein [Rhodopseudomonas palustris CGA009]
 gi|39648711|emb|CAE27233.1| putative branched-chain amino acid transport system ATP-binding
           protein [Rhodopseudomonas palustris CGA009]
          Length = 590

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 66/334 (19%), Positives = 126/334 (37%), Gaps = 27/334 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + ++  IL   AV+  L L   +       +   +   I +  + A GL ++ G  GL S
Sbjct: 1   MPRWLPILLFAAVMTALPLIPGIPP-----FWIVLLDNIGLAALVAMGLVLLTGVGGLTS 55

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                    GAY+   + + YG+S WL +P S +++G   +++GL +++  G YL + T+
Sbjct: 56  FGQAAFCGFGAYTTAYITTVYGISPWLALPASLVVAGIAAVLLGLMTVRLSGHYLPLGTI 115

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                   +  K   +     GI     L      +                   +Y+V+
Sbjct: 116 AWGIALYYLFSKLDFL-GRNDGISRVPPLSIGPIDMYDPHT--------------IYFVI 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             M  +SA + + L  +    A R +R    A  +       AKL  F  ++   G++G 
Sbjct: 161 WAMVLISAVLTMNLLDSRTGRAIRALRRGHVAAEAFGVQTARAKLLVFIYAAVLAGLSGW 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A  +  ++P  F     I  + I ++GG   +       AI+I + E+  G     F 
Sbjct: 221 LYAHFQRNVNPTPFGPQAGIEYLFIAVVGGAGYVWGGVLGAAIVIILKEVLQGYLPLLFG 280

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                          +  I L +++ +    +  
Sbjct: 281 GQ-------GQLEIIVFGILLVVLLQLAPGGVWP 307


>gi|172059158|ref|YP_001806810.1| ABC transporter-like protein [Burkholderia ambifaria MC40-6]
 gi|171991675|gb|ACB62594.1| ABC transporter related [Burkholderia ambifaria MC40-6]
          Length = 594

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 124/326 (38%), Gaps = 22/326 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + +V    L +  GA +  +Y  ++   I +Y + A GL ++ G  G+ S        
Sbjct: 10  FWVFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY+   L +RYG+S WL + V  +++    +++G  +++  G +L + T+        
Sbjct: 70  IGAYATAFLTTRYGVSPWLALIVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +    + +     GI     L   G  + S                 +Y+++  +   + 
Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGIELGS--------------GRSLYFLIWAVVLAAI 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  +  
Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVDTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P  F  +  I  + + ++GG++ +       AIL  + +    +      +   F   
Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGAEGNF--- 291

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  +  + + L++      +  
Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313


>gi|170699460|ref|ZP_02890503.1| ABC transporter related [Burkholderia ambifaria IOP40-10]
 gi|170135609|gb|EDT03894.1| ABC transporter related [Burkholderia ambifaria IOP40-10]
          Length = 594

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 124/326 (38%), Gaps = 22/326 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + +V    L +  GA +  +Y  ++   I +Y + A GL ++ G  G+ S        
Sbjct: 10  FWVFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY+   L +RYG+S WL + V  +++    +++G  +++  G +L + T+        
Sbjct: 70  IGAYATAFLTTRYGVSPWLALIVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +    + +     GI     L   G  + S                 +Y+++  +   + 
Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGIELGS--------------GRSLYFLIWAVVLAAI 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  +  
Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P  F  +  I  + + ++GG++ +       AIL  + +    +      S   F   
Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  +  + + L++      +  
Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313


>gi|119898283|ref|YP_933496.1| ABC transporter ATP-binding/permease [Azoarcus sp. BH72]
 gi|119670696|emb|CAL94609.1| ABC transporter ATP-binding/permease protein [Azoarcus sp. BH72]
          Length = 619

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 48/332 (14%), Positives = 109/332 (32%), Gaps = 31/332 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+   L  L +       +  ++   I +Y M A GL ++ G  GL S        +GA
Sbjct: 28  LVLGVFLALLAVAPLVLPPFYVTLLNYIGLYAMVALGLVLLTGVGGLTSFGQAAFVGLGA 87

Query: 79  YSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
           Y+  +           +  G S WL + V    +    +++G  +LK  G YL + T+  
Sbjct: 88  YTTALLCTATELPGWLAWAGGSPWLALVVGLAFTAVVAVVLGSLTLKLSGHYLPLGTIAW 147

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 +    + +  G  G+     +   G  +                   +YY++  
Sbjct: 148 GISLYFLFGTMESL-GGHTGLTGIPPISIFGWVLDQGEE--------------IYYLIWV 192

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
               +      L  +    A R ++       ++      +++  F +++     +G  +
Sbjct: 193 FLLAAVFTTQNLLDSREGRAIRALKGGMVMAEAMGVDTSRSRMIIFVIAALHACASGWLY 252

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A  +  ++P  F     I  + + ++GG   +        ++  + +    +    F   
Sbjct: 253 AHMQRFVNPTPFGLHIGIEYLFMAVVGGAGHVWGALVGAGVITVLKQWLQDLLPRLFGQS 312

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             F          +  + + +V+      L  
Sbjct: 313 GNF-------EVIVFGLMMVIVLQRARDGLWP 337


>gi|194290588|ref|YP_002006495.1| high-affinity branched-chain amino acid transport protein, ABC
           superfamily, membrane component [Cupriavidus taiwanensis
           LMG 19424]
 gi|193224423|emb|CAQ70434.1| high-affinity branched-chain amino acid transport protein, ABC
           superfamily, membrane component [Cupriavidus taiwanensis
           LMG 19424]
          Length = 385

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 94/345 (27%), Positives = 155/345 (44%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +  L+  +   L   F+  T    Y   +    L+Y+M A GL+IVVG  GLL L  +  
Sbjct: 22  LAALIGFLVVALCAPFIVQTLGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAF 81

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY   +LGS +                 LS+W ++P++ +++   G+++G P+LK 
Sbjct: 82  YAVGAYMMALLGSPHLANQFEWIQQLFPTGIHLSMWFVLPLAILVAATFGVLLGAPTLKL 141

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +        +         
Sbjct: 142 RGDYLAIVTLGFGEIIRIFMNNLDRPVNITNGPKGITAVDPVHIFGFDFSKSHEIFGLKF 201

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+L+ +  +   + L L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 202 SPVFMYYYLLVFLVIVIVFVCLRLQTSRIGRAWVAIREDEIAAKAMGINTRNIKLLAFAM 261

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G +GA F A +  +SP+ F   E+I V++IV+LGGM  +  +     +L+G  EL
Sbjct: 262 GASFGGASGAVFGAFQGFVSPESFTLWESIYVLAIVVLGGMGHIPGVILGGVLLVGFQEL 321

Query: 298 CCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              +       L         +    L  +AL  V+L R   +  
Sbjct: 322 LRVVAEPMQTGLFGHVIVDAEVLRQLLFGLALVGVMLYRPAGIWP 366


>gi|152988081|ref|YP_001349658.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           aeruginosa PA7]
 gi|150963239|gb|ABR85264.1| branched-chain amino acid transport protein BraE [Pseudomonas
           aeruginosa PA7]
          Length = 417

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 99/328 (30%), Positives = 160/328 (48%), Gaps = 24/328 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               + +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAY+Y +L    G 
Sbjct: 105 WPFFASRGAVDIATLILIYVMLGIGLNIVVGLAGLLDLGYVGFYAVGAYTYALLAEYAGF 164

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ M++   G ++G P L+ RGDYLAI TL   EI + +L     IT G  GI
Sbjct: 165 GFWTALPIAGMMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRNMTEITGGPNGI 224

Query: 151 YVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
               +    G T         ++   FF    +     I +Y + L +  L+  +I  L 
Sbjct: 225 GSIPKPTLFGLTFERRAPEGMQTFHEFFGIAYNTNYKVILLYVIALLLVLLALFVINRLM 284

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R  I  AW  +R+++ A  +L       KLSAF + ++F G AG+FFAA +  ++P+ F 
Sbjct: 285 RMPIGRAWEALREDEVACRALGLNPTIVKLSAFTIGASFAGFAGSFFAARQGLVTPESFT 344

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F E+ ++++IV+LGGM S   +  A  +++ + E+                  FN     
Sbjct: 345 FIESAMILAIVVLGGMGSQLGVILAAVVMVLLQEM----------------RGFNEYRML 388

Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLE 350
           +  + + ++++ R   LL ++ P   L+
Sbjct: 389 IFGLTMIVMMIWRPQGLLPMQRPHLELK 416


>gi|300717444|ref|YP_003742247.1| High-affinity branched-chain amino acid ABC transporter permease
           [Erwinia billingiae Eb661]
 gi|299063280|emb|CAX60400.1| High-affinity branched-chain amino acid ABC transporter, permease
           protein [Erwinia billingiae Eb661]
          Length = 429

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 101/332 (30%), Positives = 157/332 (47%), Gaps = 22/332 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  LL+   L    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 102 IIPLLLVLGILFPFIATKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 161

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P+ A+++   G ++G P L+  GDYLAI TL   EI + +L  
Sbjct: 162 GLALGYQYLGLGFWAMLPLGAVMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLTN 221

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +F     R        +  F        +  IF+Y VL+ +  
Sbjct: 222 WVSFTGGPNGVSVPSPTFFGLEFGRRAKDGGVPIHEFLNITYDPNLKFIFIYTVLILVVL 281

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   I   L R  I  AW  +R+++ A  ++    +  KLSAF + ++  G+AG FFA  
Sbjct: 282 LVLFIKHRLTRMPIGRAWEALREDEIACRAMGLNHVLVKLSAFMMGASTAGIAGVFFATY 341

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL      Y        
Sbjct: 342 QGFVNPTSFTFFESALILAIVVLGGMGSTLGVVLAAFVLTVAPELLRSFAEY-------- 393

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                     L  + + L+++ R   L+R   
Sbjct: 394 -------RVLLFGVLMVLMMIWRPRGLVRTSR 418


>gi|15596269|ref|NP_249763.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           aeruginosa PAO1]
 gi|107100517|ref|ZP_01364435.1| hypothetical protein PaerPA_01001542 [Pseudomonas aeruginosa PACS2]
 gi|254234208|ref|ZP_04927531.1| branched-chain amino acid transport protein BraE [Pseudomonas
           aeruginosa C3719]
 gi|296390564|ref|ZP_06880039.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           aeruginosa PAb1]
 gi|313106026|ref|ZP_07792285.1| branched-chain amino acid transport protein BraE [Pseudomonas
           aeruginosa 39016]
 gi|115123|sp|P21628|BRAE_PSEAE RecName: Full=High-affinity branched-chain amino acid transport
           system permease protein BraE
 gi|9946988|gb|AAG04461.1|AE004539_3 branched-chain amino acid transport protein BraE [Pseudomonas
           aeruginosa PAO1]
 gi|216865|dbj|BAA14256.1| integral membrane protein [Pseudomonas aeruginosa]
 gi|126166139|gb|EAZ51650.1| branched-chain amino acid transport protein BraE [Pseudomonas
           aeruginosa C3719]
 gi|310878787|gb|EFQ37381.1| branched-chain amino acid transport protein BraE [Pseudomonas
           aeruginosa 39016]
          Length = 417

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 100/328 (30%), Positives = 160/328 (48%), Gaps = 24/328 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               + +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAY+Y +L    G 
Sbjct: 105 WPFFASRGAVDIATLILIYVMLGIGLNIVVGLAGLLDLGYVGFYAVGAYTYALLAEYAGF 164

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ M++   G ++G P L+ RGDYLAI TL   EI + +L     IT G  GI
Sbjct: 165 GFWTALPIAGMMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRNMTEITGGPNGI 224

Query: 151 YVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
               +    G T         ++   FF    +     I +Y V L +  L+  +I  L 
Sbjct: 225 GSIPKPTLFGLTFERRAPEGMQTFHEFFGIAYNTNYKVILLYVVALLLVLLALFVINRLM 284

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R  I  AW  +R+++ A  +L       KLSAF + ++F G AG+FFAA +  ++P+ F 
Sbjct: 285 RMPIGRAWEALREDEVACRALGLNPTIVKLSAFTIGASFAGFAGSFFAARQGLVTPESFT 344

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F E+ ++++IV+LGGM S   +  A  +++ + E+                  FN     
Sbjct: 345 FIESAMILAIVVLGGMGSQLGVILAAVVMVLLQEM----------------RGFNEYRML 388

Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLE 350
           +  + + ++++ R   LL ++ P   L+
Sbjct: 389 IFGLTMIVMMIWRPQGLLPMQRPHLELK 416


>gi|171315840|ref|ZP_02905071.1| ABC transporter related [Burkholderia ambifaria MEX-5]
 gi|171099029|gb|EDT43814.1| ABC transporter related [Burkholderia ambifaria MEX-5]
          Length = 594

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 124/326 (38%), Gaps = 22/326 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + +V    L +  GA +  +Y  ++   I +Y + A GL ++ G  G+ S        
Sbjct: 10  FWVFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY+   L +RYG+S WL + V  +++    +++G  +++  G +L + T+        
Sbjct: 70  IGAYATAFLTTRYGVSPWLALIVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +    + +     GI     L   G  + S                 +Y+++  +   + 
Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGIELGS--------------GRSLYFLIWAVVLAAI 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  +  
Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFIYAAVLAAVSGFLYAHLQRA 234

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P  F  +  I  + + ++GG++ +       AIL  + +    +      S   F   
Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  +  + + L++      +  
Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313


>gi|126435612|ref|YP_001071303.1| inner-membrane translocator [Mycobacterium sp. JLS]
 gi|126235412|gb|ABN98812.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Mycobacterium sp. JLS]
          Length = 390

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 78/354 (22%), Positives = 146/354 (41%), Gaps = 23/354 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
            R+ K+     +   +  L +F                 Q  +  + A GL++VVG  GL
Sbjct: 20  TRVQKWVVGAVVFLAIGLLPIFTPSWLDTPGISFGGTMAQFAMVAIIAIGLNVVVGQAGL 79

Query: 66  LSLNCVIAYAIGAYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMG 111
           L L  V  YA+GAY+  +L S                  +    +P++  ++   G+I+G
Sbjct: 80  LDLGYVGFYAVGAYTVALLTSPSSPWNQAGPGGWFTTDWAWLACVPLAMAVTALAGLILG 139

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
            P+L+ RGDYLAI TL   EI + +      +TNG  G+   +      +       F R
Sbjct: 140 TPTLRLRGDYLAIVTLGFGEIIRLLADNLSDVTNGPRGLNEVEYPRVGESERLPEGVFSR 199

Query: 172 FPSSF-VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
             S+    Y  + +++ L +      ++  L R+ +  AW  +R+++ A   +       
Sbjct: 200 ANSTGEANYGTWWFWLGLLLIVGILLLVGNLERSRVGRAWVAVREDEDAAEVMGVNTFRF 259

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           KL AF + +A  G++GA +A     ++P  F    +++ +  V+LGG  +   +     I
Sbjct: 260 KLWAFVIGAAIGGLSGALYAGQVQYVAPPTFNIINSMLFLCAVVLGGQGNKLGVIFGAFI 319

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           ++ +     G++F           +          +AL ++++ R   L   R 
Sbjct: 320 IVYLPNRLLGVHF--------LGINLGDLKYLFFGLALVVLMIFRPQGLFPARQ 365


>gi|115350138|ref|YP_771977.1| ABC transporter-like protein [Burkholderia ambifaria AMMD]
 gi|115280126|gb|ABI85643.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
           / amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Burkholderia ambifaria AMMD]
          Length = 594

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 124/326 (38%), Gaps = 22/326 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + +V    L +  GA +  +Y  ++   I +Y + A GL ++ G  G+ S        
Sbjct: 10  FWVFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY+   L +RYG+S WL + V  +++    +++G  +++  G +L + T+        
Sbjct: 70  IGAYATAFLTTRYGVSPWLALIVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +    + +     GI     L   G  + S                 +Y+++  +   + 
Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGIELGS--------------GRSLYFLIWAVVLAAI 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  +  
Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P  F  +  I  + + ++GG++ +       AIL  + +    +      S   F   
Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  +  + + L++      +  
Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313


>gi|332284427|ref|YP_004416338.1| leucine/isoleucine/valine transporter permease subunit
           [Pusillimonas sp. T7-7]
 gi|330428380|gb|AEC19714.1| leucine/isoleucine/valine transporter permease subunit
           [Pusillimonas sp. T7-7]
          Length = 408

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 98/339 (28%), Positives = 158/339 (46%), Gaps = 23/339 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +++ L+    +    + +    +   +LIYVM   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 84  LIFLLIAIALVWPFTTGRAQVDIATLVLIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGAY 143

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L    G   W  +P +  +S   G ++G P L+ RGDYLAI TL   EI + +LI 
Sbjct: 144 TYALLYHWAGWGFWEALPFAGGMSALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLLIN 203

Query: 140 WKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
              +T G  GI    +    G  +         +      +        IF+Y + L + 
Sbjct: 204 LYTLTGGPDGISGVPKPTVFGFPMARRAPEGVTTFHELVGWNYDTQDVIIFLYLMALCLA 263

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            ++  +   + R  I  AW  +R+++ A  SL       KLSAF + + F G  GAFFAA
Sbjct: 264 LITLFVSNRVIRMPIGRAWEALREDEIACRSLGLNPTRIKLSAFTMGAMFAGFGGAFFAA 323

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  ++P+ F F E+ ++++IV+LGGM S   +  A  IL  V E+      Y       
Sbjct: 324 RQGLVNPESFTFIESALILAIVVLGGMGSQVGVILAAIILTVVPEIAREFAEY------- 376

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                      +  + + L+++ R   LL ++ P   L+
Sbjct: 377 --------RMLIFGLVMVLMMMWRPQGLLPVKRPQVELK 407


>gi|288934788|ref|YP_003438847.1| inner-membrane translocator [Klebsiella variicola At-22]
 gi|288889497|gb|ADC57815.1| inner-membrane translocator [Klebsiella variicola At-22]
          Length = 428

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 100/339 (29%), Positives = 160/339 (47%), Gaps = 22/339 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L +        + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 101 IMPLLAVLAIAFPFLASKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 160

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P+ A+++   G ++G P L+  GDYLAI TL   EI + +L  
Sbjct: 161 GLALGYQYLGLGFWAMLPLGAVMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 220

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V     F     R        +  FF    +  +  IF+Y VL  +  
Sbjct: 221 WVSFTGGPNGVPVPSPTLFGLEFTRRARDGGIPIHEFFHVSYNPNLKFIFLYAVLCLVVM 280

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   +   L R  I  AW  +R+++ A  ++    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 281 LVLLVKHRLTRMPIGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGIAGVFFASY 340

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL  G + Y        
Sbjct: 341 QGFVNPTSFTFFESALILAIVVLGGMGSTLGVVLAAFVLTVTPELLRGFDEY-------- 392

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                     L  + + ++++ R   L+R       L +
Sbjct: 393 -------RVLLFGVLMVVMMIWRPRGLVRTSRSGVALRK 424


>gi|146283319|ref|YP_001173472.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           stutzeri A1501]
 gi|145571524|gb|ABP80630.1| branched-chain amino acid transport protein BraE [Pseudomonas
           stutzeri A1501]
 gi|327481712|gb|AEA85022.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           stutzeri DSM 4166]
          Length = 418

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 107/340 (31%), Positives = 168/340 (49%), Gaps = 23/340 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L+L   +      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 94  IILALVLVALVWPFYGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L   YG+  W  +P++  ++   G ++G P L+ RGDYLAI TL   EI + +L  
Sbjct: 154 TYALLSHYYGVGFWTALPIAGAMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRN 213

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR--------SLIRFFRFPSSFVIYEIFMYYVLLGMC 191
              IT G  GI   D+  F G +          +   +F    + V   IF+Y + L + 
Sbjct: 214 MTSITGGPNGISGIDKPTFFGLSFDRRAAEGMQTFHEYFGIAYNSVNKVIFLYLIALLLV 273

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+  +I  L R  I  AW  +R+++ A  +L       KLSAF + + F G AG+FFAA
Sbjct: 274 LLTLFVINRLLRMPIGRAWEALREDEIACRALGMNPTVIKLSAFTLGATFAGFAGSFFAA 333

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  +SP+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y       
Sbjct: 334 RQGLVSPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSEY------- 386

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                      +    + L+++ R   LL ++ P   L++
Sbjct: 387 --------RMLMFGALMVLMMIWRPQGLLPMQRPHLELKQ 418


>gi|116049001|ref|YP_792197.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|115584222|gb|ABJ10237.1| branched-chain amino acid transport protein BraE [Pseudomonas
           aeruginosa UCBPP-PA14]
          Length = 417

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 100/328 (30%), Positives = 160/328 (48%), Gaps = 24/328 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               + +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAY+Y +L    G 
Sbjct: 105 WPFFASRGAVDIATLILIYVMLGIGLNIVVGLAGLLDLGYVGFYAVGAYTYALLAEYAGF 164

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ M++   G ++G P L+ RGDYLAI TL   EI + +L     IT G  GI
Sbjct: 165 GFWTALPIAGMMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRNMTEITGGPNGI 224

Query: 151 YVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
               +    G T         ++   FF    +     I +Y V L +  L+  +I  L 
Sbjct: 225 GSIPKPTLFGLTFERRAPEGMQTFHEFFGIAYNTNYKVILLYVVALLLVLLALFVINRLM 284

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R  I  AW  +R+++ A  +L       KLSAF + ++F G AG+FFAA +  ++P+ F 
Sbjct: 285 RMPIGRAWEALREDEVACRALGLNPTIVKLSAFTIGASFAGFAGSFFAARQGLVTPESFT 344

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F E+ ++++IV+LGGM S   +  A  +++ + E+                  FN     
Sbjct: 345 FIESAMILAIVVLGGMGSQLGVILAAVVMVLLQEM----------------RGFNEYRML 388

Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLE 350
           +  + + ++++ R   LL ++ P   L+
Sbjct: 389 IFGLTMIVMMIWRPQGLLPMQRPHLELK 416


>gi|229588105|ref|YP_002870224.1| high-affinity branched-chain amino acid transporter permease
           [Pseudomonas fluorescens SBW25]
 gi|229359971|emb|CAY46825.1| high-affinity branched-chain amino acid transport system permease
           protein [Pseudomonas fluorescens SBW25]
          Length = 425

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 97/329 (29%), Positives = 156/329 (47%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 98  IIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 157

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 158 GLALGYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 217

Query: 140 WKPITNGKAGIYVADRLYFLGTT-------VRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +                  FF    +  I  +F+Y VL  +  
Sbjct: 218 WLSFTGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVL 277

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  +  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 278 AVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 337

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 338 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 389

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  + + ++++ R   L+R
Sbjct: 390 -------RVLLFGVLMVVMMIWRPRGLIR 411


>gi|56415461|ref|YP_152536.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197364391|ref|YP_002144028.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|56129718|gb|AAV79224.1| high-affinity branched-chain amino acid transport system permease
           protein [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197095868|emb|CAR61442.1| high-affinity branched-chain amino acid transport system permease
           protein [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
          Length = 421

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 103/341 (30%), Positives = 159/341 (46%), Gaps = 28/341 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  LL+          +    +    +IY++   GL++VVG  GLL L     YAIGA
Sbjct: 91  LFLMALLVIAVAWPFMVSRGSVDIATMTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YGL  W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G             +   FF          IF+Y V L 
Sbjct: 211 NNTEITGGPNGISQIPKPTLFGLEFSRNTREGGWDTFSNFFGVKYDPSDRVIFLYLVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  LS  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 271 LVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F+E+  V++IV+LGGM S   +  A  +L+                 
Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVV---------------- 374

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                 FN     ++   + L+++ R   LL +  P   L+
Sbjct: 375 ---SRDFNEYSMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 412


>gi|218294978|ref|ZP_03495832.1| inner-membrane translocator [Thermus aquaticus Y51MC23]
 gi|218244886|gb|EED11410.1| inner-membrane translocator [Thermus aquaticus Y51MC23]
          Length = 442

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 89/340 (26%), Positives = 156/340 (45%), Gaps = 17/340 (5%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR- 87
              A  +  ++  +GIQI IY   A GL++VVG  GLL L     +A+GAY++ I GS  
Sbjct: 101 VPLAGFANTFVFELGIQIGIYAAMALGLNVVVGMAGLLDLGYAAFFAVGAYTWAIFGSEQ 160

Query: 88  -----------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                       G  ++L + ++ + +   G+++GLP+L+ RGDYLAI TL + E+ + +
Sbjct: 161 AKNFMKGNFPLPGEYMYLFMLIAIVTTAITGLLIGLPALRLRGDYLAIVTLGLGEVVRIL 220

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIR--FFRFPSSFVIYEIFMYYVLLGMCFLS 194
                   N   G      +          +             Y++F Y ++L M  L 
Sbjct: 221 ANNLDHPINFTNGPQGITPVQRPPIDWFRHLMASLGIPLDQTTDYQLFFYLLVLLMIGLV 280

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + + L  +    AW  IR+++ A  S+   ++  KL AF   +AF G+ G  +AA R 
Sbjct: 281 VLVNVNLANSRFGRAWVAIREDEIAARSMGIPLLPTKLLAFMTGAAFSGVMGVIYAAQRT 340

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV-VELCCGMNFYYFNSLLKFD 313
            +SP+ F    +I ++++VILGGM S+       A L  + +++    + +   SL +  
Sbjct: 341 FVSPESFTLLASITILAMVILGGMGSIPGAILGAAALSILNLDVLKTFSEFVRTSLPQIP 400

Query: 314 CSFNMRHT--TLMVIALFLVILMRSHSLLRLRTPSNFLER 351
              +       ++ I L L+++ R   L+  R     +E 
Sbjct: 401 SQVDPAKYERLVLGIILVLMMIYRPTGLIPERRHRAEMEE 440


>gi|221213699|ref|ZP_03586673.1| inner-membrane translocator [Burkholderia multivorans CGD1]
 gi|221166488|gb|EED98960.1| inner-membrane translocator [Burkholderia multivorans CGD1]
          Length = 389

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 83/345 (24%), Positives = 153/345 (44%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +     ++    +       Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  LVVGVLTAAFVIAAPLIIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                 LS ++++P++  ++   G+++G P+L+ 
Sbjct: 83  YAVGAYTAALLTSPHLANQFQWFAQMWPGGMHLSYFIIVPIAMALAALFGVLLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +     +L +         
Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPQGITGIDPVHVGGFNLSQTHTLFGFQF 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    L   +   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA FA  +  +SP+ F F E+++V++ V+LGGM  +  +     +L    E 
Sbjct: 263 GASFGGLSGAMFAGFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLAVFPEF 322

Query: 298 CCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    +++         +    L  +A+ L++L RS  L  
Sbjct: 323 LRSTMGPLQHAIFGHQIIDTEVIRQLLYGLAMVLIMLYRSEGLWP 367


>gi|261344958|ref|ZP_05972602.1| high-affinity branched-chain amino acid transport protein
           [Providencia rustigianii DSM 4541]
 gi|282567101|gb|EFB72636.1| high-affinity branched-chain amino acid transport protein
           [Providencia rustigianii DSM 4541]
          Length = 423

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 104/340 (30%), Positives = 164/340 (48%), Gaps = 23/340 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   +++   +      +    +    LIYVM   GL++VVG  GLL L     YAIGA
Sbjct: 91  IIGILIIVAAIIWPFIVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYAGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   Y    W  +P++ + +   G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTFGLLNHYYDFGFWESLPIAGITAALAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGM 190
               IT G  GI    +  F G            +   FF    +     IF+Y+V L +
Sbjct: 211 NNTEITGGPNGISQLPKPTFFGLEFSRTAKDGWDTFHNFFGLDYNPGDRIIFLYFVALLL 270

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L+  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AGA FA
Sbjct: 271 VVLTFIVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGALFA 330

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           A +  ISP+ F F+E+  V++IV+LGGM S + +  A  IL+   E+   +N Y      
Sbjct: 331 ARQGFISPESFTFAESAFVLAIVVLGGMGSQTSVILAAIILVVSREMMRDLNEY------ 384

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                       L+   + L+++ R   LL ++     L+
Sbjct: 385 ---------SMLLLGALMVLMMIWRPQGLLPMQRRHMKLK 415


>gi|85715590|ref|ZP_01046570.1| ABC-type branched-chain amino acid transport system permease
           component [Nitrobacter sp. Nb-311A]
 gi|85697529|gb|EAQ35406.1| ABC-type branched-chain amino acid transport system permease
           component [Nitrobacter sp. Nb-311A]
          Length = 474

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 118/360 (32%), Positives = 179/360 (49%), Gaps = 40/360 (11%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           LL     L   L      +Q+Y+  +GI +L YVM  WGL+IVVG  GLL L  V  YA+
Sbjct: 116 LLTPALLLFALLVPVIFYNQRYLLDLGILVLTYVMLGWGLNIVVGLAGLLDLGYVAFYAV 175

Query: 77  GAYSYVILGS---------------------RYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           GAYSY +L                           + W+L+PVS +++   GM++G P L
Sbjct: 176 GAYSYALLAQSGLPFPYFTEASPYIAINFLQPGPWAFWVLLPVSGLLAAFWGMLLGFPVL 235

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFR 171
           + RGDYLAI TL   EI + +++ W+ +T G  GI    R    G  +            
Sbjct: 236 RLRGDYLAIVTLAFGEIIRLVILNWQELTGGPNGISGIPRPTVFGIPLTPGEDGFAALIG 295

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
            P S     +F++Y++L +  L+  + + LRR  I  AW  +R+++ A  +L   I   K
Sbjct: 296 VPFSPTHRLVFLFYIILALALLTNWVTIRLRRLPIGRAWEAMREDEVACRALGINITTTK 355

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           LSAFA+ + F G AGAFFA  +  ISP+ F F E+ +V++IV+LGGM S   +A A   +
Sbjct: 356 LSAFAIGAMFGGFAGAFFATRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAAIAM 415

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           IG  EL  G++ +                  +    + L+++ R   L+  R P+ FL++
Sbjct: 416 IGGFELFRGLDQF---------------RMLVFGGVMVLLMIWRPRGLVSHRAPTVFLQK 460


>gi|120610556|ref|YP_970234.1| inner-membrane translocator [Acidovorax citrulli AAC00-1]
 gi|120589020|gb|ABM32460.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 358

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 90/340 (26%), Positives = 160/340 (47%), Gaps = 18/340 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +     LL+   +  +    ++  +    L+YVM A GL+IVVG  GLL L  V  YA+G
Sbjct: 9   IIGAIALLVLPLILQSFGNAWV-RIADLALLYVMLALGLNIVVGYAGLLDLGYVAFYAVG 67

Query: 78  AYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           AY + ++ S +                  S+WL+IP++A+++  CG ++G P+LK RGDY
Sbjct: 68  AYLFGLMASPHLSDTFASFAAMFPNGLHTSLWLVIPLAALVAAVCGALLGAPTLKLRGDY 127

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LAI TL   EI +  L       N   G     ++  +      L R        +    
Sbjct: 128 LAIVTLGFGEIIRIFLNNLDHPVNLTNGPKGIGQIDSVKVFGLDLGRRLELFGYDINSVT 187

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             YY+ L +   S  I   L+ + I  AW  IR+++ A  ++       KL AF + ++F
Sbjct: 188 LYYYLFLVLVVFSVIICYRLQDSRIGRAWMAIREDEIAAKAMGINTRNLKLLAFGMGASF 247

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G++GA F A +  +SP+ F   E+++++++V+LGG+  +  +     +L  + E+   +
Sbjct: 248 GGVSGAMFGAFQGFVSPESFSLMESVMIVAMVVLGGIGHIPGVILGAVLLSALPEVLRYV 307

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                 S+        +    L+ +A+ +++L+R   L  
Sbjct: 308 AGP-LQSMTDGRLDSAILRQLLIALAMIIIMLLRPRGLWP 346


>gi|121611609|ref|YP_999416.1| ABC transporter-like protein [Verminephrobacter eiseniae EF01-2]
 gi|121556249|gb|ABM60398.1| ABC transporter related [Verminephrobacter eiseniae EF01-2]
          Length = 840

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 61/333 (18%), Positives = 120/333 (36%), Gaps = 37/333 (11%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   I  +  VV P LL        S          ++I+ + A GL+++VG  GL S  
Sbjct: 6   RPLWIGAIALVVAPFLLQALGLTLTSS-------TDVVIFAIAAMGLNLLVGYTGLTSFG 58

Query: 70  CVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
               + IGAY+  +    +      L + ++ +        +GL  L+ RG Y ++ TL 
Sbjct: 59  HGAWFGIGAYAAALFQKHWLPGQFVLPLLLAVLFIACGSTAIGLLILRRRGVYFSLLTLA 118

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +S +   I  +W  +T G++G+    R       +                 +    ++ 
Sbjct: 119 LSALTFAIAFRWTALTGGESGLGGVVRPAIGPVNLDD--------------PLAYLVLVS 164

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            + +    ++L + R+   +    IR+N++            KL+ F +S+   G+AGA 
Sbjct: 165 LIGWGVLYLLLRVVRSPFGHTVVAIRENEQRATFQGYDTSRYKLTMFVLSATVTGLAGAL 224

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                   S +    + +  ++++V++GGM S    A      +   E            
Sbjct: 225 MVFHHRFASAEPTSVAFSGELLAMVVMGGMRSFLGPALGALFYMLFREFLS--------- 275

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  +         +A    IL     L+ 
Sbjct: 276 ------IWTGNWLLWFGLAFVGFILFSPTGLVG 302


>gi|26991545|ref|NP_746970.1| inner-membrane translocator [Pseudomonas putida KT2440]
 gi|24986629|gb|AAN70434.1|AE016684_13 branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas putida KT2440]
          Length = 435

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 99/329 (30%), Positives = 158/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 108 IIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 167

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 168 GLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 227

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+      +F     R        +  FF F  +  +  +F+Y VL  +  
Sbjct: 228 WLSFTGGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNASLKFVFIYAVLFMVVL 287

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  +  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA  
Sbjct: 288 AVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATY 347

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 348 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 399

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  + + L+++ R   L+R
Sbjct: 400 -------RVLLFGVLMVLMMIWRPRGLIR 421


>gi|317401390|gb|EFV82024.1| inner-membrane translocator ABC transporter [Achromobacter
           xylosoxidans C54]
          Length = 829

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 74/334 (22%), Positives = 138/334 (41%), Gaps = 31/334 (9%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +       LAV   L +     A     Y   +   + +  +   GL++++G  G +S 
Sbjct: 3   RRSAFSWPALAVYAVLAVVSLALAASVNGYYVFVIGNVALLALAGIGLNVLLGLTGQMSF 62

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                YAIGAY+  IL  + G + WL  PV+A ++G  G+++ LP+L+ +G YLA+ T+ 
Sbjct: 63  GHAAFYAIGAYTVAILTGQAGWNFWLAWPVAAAVAGVFGLLLALPALRVQGPYLAMITIA 122

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
              I ++ L++   +T G+ G+    +                     +  +  +  + +
Sbjct: 123 FGFIVEHTLVEGGDLTGGQNGLMGIAQPA----------------LGALGGDRGVAMLAI 166

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
              F + +    L R +   A R ++D++ A  S+    +  K  AF VS+A +G+AG  
Sbjct: 167 VTVFAALAGYALLARGSWGAAMRAVKDSETASESIGINPLVVKAVAFMVSAAVVGLAGGL 226

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +A     I+P  F F ++I+ +  V +GG  SL+       ++  + EL   +  Y    
Sbjct: 227 YAPQAGMITPHNFNFMQSILFVLAVTIGGAGSLAGPLLGAVVVGLLPELLSSLEEY---- 282

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                              L +V+         L
Sbjct: 283 -----------RLLFFGAFLLVVLWAAPEGAAGL 305


>gi|298293553|ref|YP_003695492.1| ABC transporter [Starkeya novella DSM 506]
 gi|296930064|gb|ADH90873.1| ABC transporter related protein [Starkeya novella DSM 506]
          Length = 595

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 72/327 (22%), Positives = 135/327 (41%), Gaps = 30/327 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  L  +    +   +      +Y   + +  LIY + A GL++++G  GL+SL     +
Sbjct: 4   LYALGFLALAAVLTAVPLASDNEYELRLFMLFLIYAIIAVGLNVLIGLAGLVSLGQAGLF 63

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+G+Y+  I  +R G  +      +A+++G  G+++  P+++ RG YLA+ T+    I +
Sbjct: 64  ALGSYTGAITATRLGFDMVGAGLTAAVVAGLFGVLLAYPTVRVRGVYLAVVTIAFGLIVE 123

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           N+ I+W+ +T G  GI         G  +                    Y VL    FL 
Sbjct: 124 NVAIEWQSLTGGTTGITSIPSPNVFGLRLSG---------------YAYYGVLAVSLFLL 168

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    L+ +        +  ++ A  +L       +  AF +++   G+AG ++A    
Sbjct: 169 VAAAHNLKGSRYGRGLMAVAQSETAARALGLDPTALRTLAFVIAAVTAGVAGTYYAFLNS 228

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ISPD+F F+++I  + +VILGG  S         IL  + E                  
Sbjct: 229 YISPDIFTFTDSIRFLLMVILGGAASTFGPVIGAYILTYLPEYLQ--------------- 273

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
            F +         L +V+ +    ++ 
Sbjct: 274 EFAVWQKFAYGALLLIVMFVLPRGIMG 300


>gi|264678300|ref|YP_003278207.1| High-affinity branched-chain amino acidtransporter permease livM
           [Comamonas testosteroni CNB-2]
 gi|299532143|ref|ZP_07045537.1| leucine/isoleucine/valine transporter permease subunit [Comamonas
           testosteroni S44]
 gi|262208813|gb|ACY32911.1| High-affinity branched-chain amino acidtransport system permease
           protein livM [Comamonas testosteroni CNB-2]
 gi|298719805|gb|EFI60768.1| leucine/isoleucine/valine transporter permease subunit [Comamonas
           testosteroni S44]
          Length = 412

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 99/341 (29%), Positives = 162/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V++ +L+        + +    +    +IYVM   GL++VVG  GLL L  V  YA+GA
Sbjct: 86  VVIFVVLMMAASWPFFAGRNAVDIATLAMIYVMLGLGLNVVVGFAGLLDLGFVGFYAVGA 145

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L    G + W  +P++   S   G ++G P L+ RGDYLAI TL   EI + +L 
Sbjct: 146 YTYALLFHWAGWTFWEALPLAGAASALFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLLT 205

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
                T G  GI    +   LG  +          +  +FF    + +   IF+Y + L 
Sbjct: 206 NLTSFTGGPDGISSIPKPTVLGLPMTRSPLTEDGTTFHQFFGMEFNSMHMVIFVYLMALL 265

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  ++  I   L R  I  AW  +R+++ A  SL    +  KLSAF + + F G  GAFF
Sbjct: 266 LAMVTLFISNRLIRMPIGRAWEALREDEIACRSLGLNPMKIKLSAFTLGAMFAGFGGAFF 325

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  IL  + EL    + Y     
Sbjct: 326 AARQGIVNPESFTFIESALILAIVVLGGMGSQLGVIVAAIILTVLPELAREFSEY----- 380

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        +  + + L+++ R   LL ++     ++
Sbjct: 381 ----------RMLIFGLVMILMMVWRPQGLLPMKRHQVEVK 411


>gi|209515789|ref|ZP_03264652.1| ABC transporter related [Burkholderia sp. H160]
 gi|209503816|gb|EEA03809.1| ABC transporter related [Burkholderia sp. H160]
          Length = 594

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 51/327 (15%), Positives = 118/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L ++    L +        +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   FFWLFLIVLFALPVLPHPIHVPEYWVTLLNYIGLYSIVAIGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IGAY+   L + +G+S WL +    +++    +++GL +++  G +L + T+       
Sbjct: 69  GIGAYATAYLTTNFGVSPWLALIAGVIVTALIALMVGLVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +     GI     L   G  + S                 +YY++  +   +
Sbjct: 129 YLFGNLDML-GKYDGINGIPVLNVFGINLESGRH--------------IYYLIWVVVLGA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       S+     + ++  F  ++    ++G  +A  + 
Sbjct: 174 VVSVQNLLNSRPGRAIRALRGGGLMAESMGVNTGWMRVVIFVYAAVLASVSGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  +  I  + + ++GG++ +       AIL  + +    +          F  
Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGENGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  I + L++      +  
Sbjct: 292 -----EVIVFGIVMVLLLQYARQGVWP 313


>gi|330807262|ref|YP_004351724.1| branched amino acid ABC transporter permease [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327375370|gb|AEA66720.1| Putative branched amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 426

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+  L++   +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 99  VIPALIVIAIVFPFFANKYVLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 158

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+ +   G I+G P L+  GDYLAI TL   EI + IL  
Sbjct: 159 GLALGYQYLGLGFWTVLPLAAIAAAMAGCILGFPVLRMHGDYLAIVTLGFGEIIRLILNN 218

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +F     R           FF    +  I  +F+Y VL     
Sbjct: 219 WLSFTGGPNGMPVPSPTFFGLEFGRRAKDGGVPFHEFFGIDYNPNIKFLFIYIVLFITVL 278

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   I   L R  +  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 279 LVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 338

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 339 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 390

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  + + L+++ R   L+R
Sbjct: 391 -------RVLLFGVLMVLMMIWRPRGLIR 412


>gi|192290387|ref|YP_001990992.1| ABC transporter [Rhodopseudomonas palustris TIE-1]
 gi|192284136|gb|ACF00517.1| ABC transporter related [Rhodopseudomonas palustris TIE-1]
          Length = 590

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 67/334 (20%), Positives = 125/334 (37%), Gaps = 27/334 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + ++  IL   AV+  L L   +       +   +   I +  + A GL ++ G  GL S
Sbjct: 1   MPRWLPILLFAAVMTALPLIPGIPP-----FWIVLLDNIGLAALVAMGLVLLTGVGGLTS 55

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                    GAY+   + + YGLS WL +P S  ++G   +++GL +++  G YL + T+
Sbjct: 56  FGQAAFCGFGAYTTAYITTVYGLSPWLALPASLAVAGIAAVLLGLMTVRLSGHYLPLGTI 115

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                   +  K   +     GI     L      +                   +Y+V+
Sbjct: 116 AWGIALYYLFSKLDFL-GRNDGISRVPPLSIGPIDMYDPHT--------------IYFVI 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             M  +SA + + L  +    A R +R    A  +       AKL  F  ++   G++G 
Sbjct: 161 WAMVLISAVLTMNLLDSRTGRAIRALRRGHVAAEAFGVQTARAKLLVFIYAAVLAGLSGW 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A  +  ++P  F     I  + I ++GG   +       AI+I + E+  G     F 
Sbjct: 221 LYAHFQRNVNPTPFGPQAGIEYLFIAVVGGAGYVWGGVLGAAIVIILKEVLQGYLPLLFG 280

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                          +  I L +++ +    +  
Sbjct: 281 GQ-------GQLEIIVFGILLVVLLQLAPGGVWP 307


>gi|329903349|ref|ZP_08273442.1| ABC transporter-like protein [Oxalobacteraceae bacterium IMCC9480]
 gi|327548427|gb|EGF33105.1| ABC transporter-like protein [Oxalobacteraceae bacterium IMCC9480]
          Length = 656

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 72/307 (23%), Positives = 140/307 (45%), Gaps = 16/307 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++A V  + +           Y   +   ILIY +  +GL IVVG  G +SL     + I
Sbjct: 8   IVASVIGIAVLAAFPLVFHNPYYIHLAETILIYAILLFGLDIVVGYTGQVSLGHAALFGI 67

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G+Y+  +L  ++GL I +  P S  ++   G ++ LP+L+  G YLA+ TL    I Q +
Sbjct: 68  GSYTTGVLYLKFGLPILIAAPASIAVTALFGALLALPALRVTGPYLAMVTLAFGTIIQIL 127

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           + +   +T G  G+ VA   +F                   + E+  +Y++  +  +S  
Sbjct: 128 INEMTFLTEGPLGLKVAKPEFFGHK----------------VNEVEFFYLVAVLMVVSLI 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++  + ++ +  A++ +RD+  A   +  ++   K+ AF +S+   G+AG+ +A S + I
Sbjct: 172 VVDRILKSHLGRAFQALRDSPIASDCMGVSVYRYKVYAFVISAGLAGLAGSLYAYSEEYI 231

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP+ + F   I+ +  VI+GG  + S       I++ +  L   +  +   + +      
Sbjct: 232 SPNTYNFELTILFLLAVIMGGRKTRSGALLGALIVVMLPSLLADIELFRKIATVAAVIGV 291

Query: 317 NMRHTTL 323
                 L
Sbjct: 292 LSAGFML 298


>gi|241762746|ref|ZP_04760810.1| ABC transporter related protein [Acidovorax delafieldii 2AN]
 gi|241368165|gb|EER62357.1| ABC transporter related protein [Acidovorax delafieldii 2AN]
          Length = 601

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 60/324 (18%), Positives = 127/324 (39%), Gaps = 31/324 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +   + L   +  +    +   +   I +  + A G++++VG  G  SL     +A+G
Sbjct: 9   IGLTLFVALAAVVPLSTDNDFYLRVLFLIGVNYIAAAGMNVLVGYTGQKSLGHAGLFAVG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  +L +R+G + W     + +++G  G+++ LP+L+ +G  LA+ T+    + + I+
Sbjct: 69  AYTTALLTTRWGWNPWPAFAAAGVMAGLFGIVIALPALRVKGPALAMVTIGFGIVVEKIV 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +W+ +  G+ GIY    L   G    S                   + +L +      +
Sbjct: 129 SEWQDVFAGQQGIYGVLPLSLGGAMFSSKHW---------------VWFVLLLGVTLHVM 173

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L R     A+  +   + A  S+  ++   K+ AF +S+   G+AGA  A     I+
Sbjct: 174 LRLLLRGRFGRAFMAVNTAEVAAESVGISVYRFKVLAFVISAVTCGLAGALIAQQNQYIN 233

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            D   F+ ++ ++ +V+ GG  S+        +L  +                     + 
Sbjct: 234 SDFITFNLSVFILLMVLFGGP-SIYGPLLGAVVLTLLDAFLSR---------------WP 277

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                     L   +      L  
Sbjct: 278 SVQHFTYGALLLFALYAMPDGLAG 301


>gi|116688115|ref|YP_833738.1| ABC transporter related [Burkholderia cenocepacia HI2424]
 gi|116646204|gb|ABK06845.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter ATP-binding protein 1,
           HAAT family [Burkholderia cenocepacia HI2424]
          Length = 594

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 54/326 (16%), Positives = 124/326 (38%), Gaps = 22/326 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L +V    L +  GA +  +Y  ++   I +Y + A GL ++ G  G+ S        
Sbjct: 10  FWLFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY+   L +RYG+S WL + V  +++    +++G  +++  G +L + T+        
Sbjct: 70  IGAYATAFLTTRYGVSPWLALIVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +    + +     GI     L   G  + S                 +Y+++  +   + 
Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGIVLES--------------GRSLYFLIWAVVLAAI 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  +  
Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P  F  +  I  + + ++GG++ +       AIL  + +    +      S   F   
Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  +  + + L++      +  
Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313


>gi|297624109|ref|YP_003705543.1| ABC transporter-like protein [Truepera radiovictrix DSM 17093]
 gi|297165289|gb|ADI15000.1| ABC transporter related protein [Truepera radiovictrix DSM 17093]
          Length = 611

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 63/323 (19%), Positives = 118/323 (36%), Gaps = 21/323 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+V      + L  +    +  ++   + I VM   GL ++ G   + S        + A
Sbjct: 22  ALVALAAFVMALLPSWLPTFSLTLLNLVAIAVMVVLGLYLLTGLARMTSFGQAAFMGVAA 81

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL +R+G+S WL +     +SG   +I+G  +++ +G YL +AT+        +  
Sbjct: 82  YATAILTTRHGVSPWLGLLAGLALSGGAALILGALTVRLKGHYLPLATIAWQMAITIVFG 141

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +T G  GI         G  +RS                  YY+  G   L+    
Sbjct: 142 NLVAVTGGHTGISGVPPASVFGLELRSSG--------------AFYYLAWGFVALALVGA 187

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+    A R +R +  A  S        +L  F V+    G AG  +A     ++P
Sbjct: 188 HNLTRSRTGRALRALRGDAVAAASFGVNPPLLRLQVFVVAGLLAGAAGWLYAHFLRFVNP 247

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F    +I  + + ++GG+ +L  +     ++  + +   G+                 
Sbjct: 248 TPFSLDASITYLIMGVVGGIAALPGVLLGAGLITWLEDWLQGVLPLLLGR-------SGN 300

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
                + + L  ++L     L  
Sbjct: 301 YEVVALGLILVAILLFAPKGLWG 323


>gi|107024506|ref|YP_622833.1| ABC transporter related [Burkholderia cenocepacia AU 1054]
 gi|105894695|gb|ABF77860.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter ATP-binding protein 1,
           HAAT family [Burkholderia cenocepacia AU 1054]
          Length = 594

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 54/326 (16%), Positives = 124/326 (38%), Gaps = 22/326 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L +V    L +  GA +  +Y  ++   I +Y + A GL ++ G  G+ S        
Sbjct: 10  FWLFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY+   L +RYG+S WL + V  +++    +++G  +++  G +L + T+        
Sbjct: 70  IGAYATAFLTTRYGVSPWLALIVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +    + +     GI     L   G  + S                 +Y+++  +   + 
Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGIVLES--------------GRSLYFLIWAVVLAAI 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  +  
Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P  F  +  I  + + ++GG++ +       AIL  + +    +      S   F   
Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  +  + + L++      +  
Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313


>gi|330899922|gb|EGH31341.1| inner-membrane translocator [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 388

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 158/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KYI ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 55  IIPMLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 114

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W  +P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 115 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 174

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +      R        +  +F F  +  +  IF+Y VL  +  
Sbjct: 175 WLSFTGGPNGVPVPAPTFLGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYAVLFLVVL 234

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 235 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 294

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 295 QGFVNPTSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 346

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  I + L+++ R   L+R
Sbjct: 347 -------RVLLFGILMVLMMIWRPRGLIR 368


>gi|167587943|ref|ZP_02380331.1| ABC transporter related protein [Burkholderia ubonensis Bu]
          Length = 594

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 121/326 (37%), Gaps = 22/326 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L +V    L +  G  +  +Y  ++   I +Y + A GL ++ G  G+ S        
Sbjct: 10  FWLFLVALFALPVLPGVLRVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY+   L +RYG+S WL +    +++    +++G  +++  G +L + T+        
Sbjct: 70  IGAYATAYLTTRYGVSPWLGLIAGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +    + +     GI     L   G  + S                 +Y+++  +   + 
Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGVVLDS--------------GRSLYFLIWAVVLAAI 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  +  
Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P  F  +  I  + + ++GG+  +       AIL  + +    +      S   F   
Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVAHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  +  + + L++      +  
Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313


>gi|315504690|ref|YP_004083577.1| inner-membrane translocator [Micromonospora sp. L5]
 gi|315411309|gb|ADU09426.1| inner-membrane translocator [Micromonospora sp. L5]
          Length = 379

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 75/353 (21%), Positives = 148/353 (41%), Gaps = 29/353 (8%)

Query: 10  KYDKILCLLAVVYPLLLFL-------FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
           ++ + + L+AV+                           +   + IYV+ A GL+IVVG 
Sbjct: 34  RWVRWVLLVAVIAFFYALPNKEFYQYLGPIPTPGANFTQVMFTVSIYVLLAVGLNIVVGF 93

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSR-----YGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
            GLL L     +A+GAY+  +L S            L++P++  ++   G+++G P+L+ 
Sbjct: 94  AGLLDLGYFGFFAVGAYTVAVLTSPSSDIKTLWPWLLVVPIAIALTMVSGVMLGTPTLRL 153

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLA+ TL  +E+ +   +  + +   +    +                    P   V
Sbjct: 154 RGDYLALVTLGFAEMIRIAAVSSEFLKGQRGFNQIPHPPGQYA---------DGRPWFGV 204

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +     Y+++L +  L    +  L  + +  AW +IR+++ A   +       KL AFA 
Sbjct: 205 LDARPYYWLVLTLIILVVIGVRNLTHSRVGRAWISIREDEDAAQLMGVPTFKFKLWAFAS 264

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +A  G+AGA FA  ++ ++   F+   +II+++ VI GG  ++        ++  ++E 
Sbjct: 265 GAAIAGLAGALFAGKQNFVNSQNFELLNSIIILAAVIFGGSGNIVGAIVGGGLVAYMIER 324

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
             G+          F             + L ++++ R   L+  R  +   +
Sbjct: 325 FRGIEL--------FGVELYEYRFLFFGLVLVVMMIFRPQGLIPNRRRAAEFK 369


>gi|170731463|ref|YP_001763410.1| ABC transporter-like protein [Burkholderia cenocepacia MC0-3]
 gi|169814705|gb|ACA89288.1| ABC transporter related [Burkholderia cenocepacia MC0-3]
          Length = 594

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 124/326 (38%), Gaps = 22/326 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + +V    L +  GA +  +Y  ++   I +Y + A GL ++ G  G+ S        
Sbjct: 10  FWVFLVVLFALPVLPGALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTSFGQAAFVG 69

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY+   L +RYG+S WL + V  +++    +++G  +++  G +L + T+        
Sbjct: 70  IGAYATAFLTTRYGVSPWLALLVGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALFY 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +    + +     GI     L   G  + S                 +Y+++  +   + 
Sbjct: 130 LFGNLELL-GKYDGINGIPALNLFGIVLES--------------GRSLYFLIWAVVLAAI 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  +  
Sbjct: 175 VSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGFLYAHLQRA 234

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P  F  +  I  + + ++GG++ +       AIL  + +    +      S   F   
Sbjct: 235 VNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGSEGNF--- 291

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  +  + + L++      +  
Sbjct: 292 ----EIIVFGVLMVLLLQYARQGVWP 313


>gi|254562545|ref|YP_003069640.1| branched chain amino acid ABC transporter ATPase/permease
           [Methylobacterium extorquens DM4]
 gi|254269823|emb|CAX25801.1| putative ABC transporter, ATPase and permease; putative
           branched-chain amino acid transporter [Methylobacterium
           extorquens DM4]
          Length = 593

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 83/331 (25%), Positives = 137/331 (41%), Gaps = 30/331 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            K L  L       + + +  T   +Y   + +  LIY + A GL+++VG  GL+SL   
Sbjct: 1   MKALYTLGFALLATILVVVPLTSGNEYELRLFMLFLIYGVIAVGLNVLVGLTGLVSLGQA 60

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +A+GAY+  IL  R+ L + L    +A+++G  G  +  PS++ RG YLA+ T+    
Sbjct: 61  GLFALGAYTGAILAIRFNLDLVLASIGAAVVAGLFGAALAYPSVRVRGVYLAVVTIAFGL 120

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +N+ I+W+ +T G  G+         G  +                    Y VL    
Sbjct: 121 IVENVAIEWQSLTGGTTGLSGIPGPNLFGYPLSG---------------YAFYAVLAITL 165

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           FL+      L+ +    A   +  ++ A  SL       +  AFAV++   G+AG+F+A 
Sbjct: 166 FLATLATHNLKHSGYGRAMLAVAQSETAARSLGIGATGIRTLAFAVAAMTAGIAGSFYAF 225

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               ISPD+F FS+++  + +VILGG  S         IL  + E+              
Sbjct: 226 LNAYISPDIFTFSDSVRFLLMVILGGAASTFGPVVGAFILTYLPEVLQRFAE-------- 277

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                           L  V+      +L  
Sbjct: 278 -------WQKFAYGALLLAVMFGLPGGILGT 301


>gi|188582997|ref|YP_001926442.1| ABC transporter [Methylobacterium populi BJ001]
 gi|179346495|gb|ACB81907.1| ABC transporter related [Methylobacterium populi BJ001]
          Length = 593

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 83/331 (25%), Positives = 137/331 (41%), Gaps = 30/331 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            K L  L       + + +  T   +Y   + +  LIY + A GL+++VG  GL+SL   
Sbjct: 1   MKALYTLGFALLAAILVVVPLTSGNEYELRLFMLFLIYGVIAVGLNVLVGLTGLVSLGQA 60

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +A+GAY+  IL  R+ L + L    +A+++G  G  +  PS++ RG YLA+ T+    
Sbjct: 61  GLFALGAYTGAILAIRFNLDLVLASIGAAVVAGLFGAALAYPSVRVRGVYLAVVTIAFGL 120

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +N+ I+W+ +T G  G+         G  +                    Y VL    
Sbjct: 121 IVENVAIEWQSLTGGTTGLSGIPGPNLFGYPLSG---------------YAFYAVLAVTL 165

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           FL+      L+ +    A   +  ++ A  SL       +  AFAV++   G+AG+F+A 
Sbjct: 166 FLATLAAHNLKHSGYGRAMLAVAQSETAARSLGIGATGIRTLAFAVAAMTAGIAGSFYAF 225

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               ISPD+F FS+++  + +VILGG  S         IL  + E+              
Sbjct: 226 LNAYISPDIFTFSDSVRFLLMVILGGAASTFGPVVGAFILTYLPEVLQRFAE-------- 277

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                           L  V+      +L  
Sbjct: 278 -------WQKFAYGALLLAVMFGLPGGILGT 301


>gi|312958684|ref|ZP_07773204.1| high-affinity branched-chain amino acid ABC transporter
           [Pseudomonas fluorescens WH6]
 gi|311287227|gb|EFQ65788.1| high-affinity branched-chain amino acid ABC transporter
           [Pseudomonas fluorescens WH6]
          Length = 425

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 97/329 (29%), Positives = 156/329 (47%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 98  IIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 157

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 158 GLALGYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 217

Query: 140 WKPITNGKAGIYVADRLYFLGTT-------VRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +                  FF    +  I  +F+Y VL  +  
Sbjct: 218 WLSFTGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFMFIYIVLFLVVL 277

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  +  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 278 AVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 337

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 338 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 389

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  + + ++++ R   L+R
Sbjct: 390 -------RVLLFGVLMVVMMIWRPRGLIR 411


>gi|134294223|ref|YP_001117958.1| ABC transporter-like protein [Burkholderia vietnamiensis G4]
 gi|134137380|gb|ABO53123.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
           / amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Burkholderia vietnamiensis G4]
          Length = 594

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 128/334 (38%), Gaps = 24/334 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + +       L V++ L +    GA +  +Y  ++   I +Y + A GL ++ G  G+ S
Sbjct: 4   MVRNKAFWVFLVVLFALPVLP--GALQVPEYWITLLNYIGLYAIVAIGLVLLTGVGGMTS 61

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                   IGAY+  +L +RYG+S WL + V  +++    +++G  +++  G +L + T+
Sbjct: 62  FGQAAFVGIGAYATALLTTRYGVSPWLALVVGVVLTALVALLLGAVTMRLSGHFLPLGTI 121

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                   +    + +     GI     L   G  + S                 +Y+V+
Sbjct: 122 AWGLALFYLFGNLELL-GKYDGISGIPALNLFGVALES--------------GRSLYFVI 166

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +   +   +  L  +    A R +R       ++     + ++  F  ++    ++G 
Sbjct: 167 WAVVLAAIVSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVVIFVYAAVLAAVSGF 226

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A  +  ++P  F  +  I  + + ++GG++ +       AIL  + +    +      
Sbjct: 227 LYAHLQRAVNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLG 286

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           S   F          +  + + +++      +  
Sbjct: 287 SEGNF-------EIIVFGVLMVVLLQYARQGVWP 313


>gi|145224156|ref|YP_001134834.1| inner-membrane translocator [Mycobacterium gilvum PYR-GCK]
 gi|315444491|ref|YP_004077370.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Mycobacterium sp. Spyr1]
 gi|145216642|gb|ABP46046.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Mycobacterium gilvum PYR-GCK]
 gi|315262794|gb|ADT99535.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Mycobacterium sp. Spyr1]
          Length = 381

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 80/361 (22%), Positives = 145/361 (40%), Gaps = 23/361 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
            R  K+   + L A +    LF                 Q  +  + A GL++VVG  GL
Sbjct: 12  TRAQKWVFGIVLFAGIALSPLFKPGFIDTPGISFGGTMAQFAMVAIIAIGLNVVVGQAGL 71

Query: 66  LSLNCVIAYAIGAYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMG 111
           L L  V  YA+GAY+  +L S                  +    +P++  ++   G+I+G
Sbjct: 72  LDLGYVGFYAVGAYTVALLTSPESPWNQMSPKGILTTPWAWLACVPLAMAVTALSGLILG 131

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT-TVRSLIRFF 170
            P+L+ RGDYLAI TL   EI + +      +TNG  G+      +FL +      +   
Sbjct: 132 TPTLRLRGDYLAIVTLGFGEIIRLLADNLADVTNGPRGLNEVAFPHFLESEQHPEGVFSV 191

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                   Y  + +++ L +      ++  L R+ +  AW  +R+++ A   +       
Sbjct: 192 SNSGGDANYGAWWFWLGLILIVGILLLVGNLERSRVGRAWIAVREDEDAAEVMGVNAFKF 251

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           KL AF + +A  G++GA +A     ++P  F    +++ +  V+LGG  +   +     I
Sbjct: 252 KLWAFTIGAAIGGLSGALYAGQVQYVAPPTFNIINSMLFLCAVVLGGQGNKLGVILGAFI 311

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           ++ +     G++F                      +AL ++++ R   L   R       
Sbjct: 312 IVYLPNRLLGVHF--------LGIDMGNLKYLFFGLALVVLMIFRPQGLFPARQHLLTYA 363

Query: 351 R 351
           R
Sbjct: 364 R 364


>gi|71905914|ref|YP_283501.1| inner-membrane translocator [Dechloromonas aromatica RCB]
 gi|71845535|gb|AAZ45031.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Dechloromonas aromatica RCB]
          Length = 353

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 95/338 (28%), Positives = 160/338 (47%), Gaps = 4/338 (1%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A++   LL L   A    +    +    ++YV  A GL+IVVG  GLL L  +  YA+G
Sbjct: 13  IALIAVALLGLPFVAAMGGQAWVRILDFAILYVFLALGLNIVVGFAGLLDLGYIAFYAVG 72

Query: 78  AYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AY++ +L S +    L IW+++P+ A ++   G+++G P+LK RGDYLAI TL   EI +
Sbjct: 73  AYTWALLASPHFGLHLPIWVILPIGAGLACFAGVLLGSPTLKLRGDYLAIVTLGFGEIVR 132

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +       N   G      +  +           +     V   I  YY+L+ +  L 
Sbjct: 133 IFMNNLNAPVNITNGPQGITLIDPVAFGDFRFSGTSQLFGLSVSGPIKYYYLLVALAILV 192

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I L L+ + I  AW+ IR+++ A  ++       KL AFA+ ++F G+AG  FAA + 
Sbjct: 193 IVINLRLQHSRIGRAWQAIREDEIAAKAVGINARNIKLLAFAMGASFGGIAGGVFAAMQG 252

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC-GMNFYYFNSLLKFD 313
            +SP+ F   E+I+++++V+LGGM  +  +     +L  + E+   G+         K  
Sbjct: 253 FVSPESFSLMESIMILAMVVLGGMGHIPGVILGAVLLSILPEVLRYGVGPAQMALFGKML 312

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                    +  +AL LV+  +   L         L+ 
Sbjct: 313 VDPESLRMLVFGLALVLVMRFKPAGLWPSPERKRELQE 350


>gi|293605597|ref|ZP_06687977.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292815977|gb|EFF75078.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 411

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 97/334 (29%), Positives = 155/334 (46%), Gaps = 24/334 (7%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +    + +    +   +LIYVM   GL+IVVG  GLL L  V  YA+GAY+Y +L  
Sbjct: 93  IAVVWPFFAGRSSVDIATLVLIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGAYTYALLYH 152

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G S W  +P S  ++   G ++G P L+ RGDYLAI TL   E+ + +LI    +T G
Sbjct: 153 WGGWSFWEALPFSGAMAALFGFVLGFPVLRLRGDYLAIVTLGFGEMIRLLLINLNTLTGG 212

Query: 147 KAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
             GI    +    G  +          +   FF          I++Y + L +  ++  +
Sbjct: 213 PDGISGIPKPTVFGLEMTRRASTEGGTTFHEFFGLTFQNQDMVIYLYMMALLLALITLFV 272

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L R  +  AW  +R+++ A  SL       KLSAF + + F G  GAFFAA +  ++
Sbjct: 273 STRLIRMPVGRAWEALREDEIACRSLGLNPTRIKLSAFTLGATFAGFGGAFFAARQGMVN 332

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F F E+ ++++IV+LGGM S   +  A  +L  + EL      Y             
Sbjct: 333 PESFTFIESALILAIVVLGGMGSQVGVILAAILLTVLPELAREFAEY------------- 379

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                +  + + L+++ R   LL ++ P   L +
Sbjct: 380 --RMLMFGLVMVLMMMWRPQGLLPMKRPHVELSK 411


>gi|302868841|ref|YP_003837478.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029]
 gi|302571700|gb|ADL47902.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029]
          Length = 379

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 77/353 (21%), Positives = 148/353 (41%), Gaps = 29/353 (8%)

Query: 10  KYDKILCLLAVVYPLLLFL-------FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
           ++ + + L AV+                           +   + IYV+ A GL+IVVG 
Sbjct: 34  RWVRWVLLAAVIVFFYALPNKEFYQYLGPIPTPGANFTQVLFTVSIYVLLAVGLNIVVGF 93

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSR-----YGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
            GLL L     +A+GAY+  +L S            L++P++  ++   G+++G P+L+ 
Sbjct: 94  AGLLDLGYFGFFAVGAYTVAVLTSPSSNLKTLWPWLLVVPIAIGLTMVSGVMLGTPTLRL 153

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLA+ TL  +E+ +   +  + +  G+ G                       P   V
Sbjct: 154 RGDYLALVTLGFAEMIRIAAVSSEFL-RGQRGFSEIPHP--------PGQYADGRPWFGV 204

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +     Y+++L +  L    +  L  + +  AW +IR+++ A   +       KL AFA 
Sbjct: 205 LDARPYYWLVLTLIILVVIGVRNLTHSRVGRAWISIREDEDAAQLMGVPTFKFKLWAFAS 264

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +A  G+AGA FA  ++ ++   F+   +II+++ VI GG  ++        ++  ++E 
Sbjct: 265 GAAIAGLAGALFAGKQNFVNSQNFELLNSIIILAAVIFGGSGNIVGAIVGGGLVAYMIER 324

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
             G+          F             + L ++++ R   L+  R  +   +
Sbjct: 325 FRGIEL--------FGIELYEYRFLFFGLVLVVMMIFRPQGLIPNRRRAAEFK 369


>gi|229826724|ref|ZP_04452793.1| hypothetical protein GCWU000182_02100 [Abiotrophia defectiva ATCC
           49176]
 gi|229789594|gb|EEP25708.1| hypothetical protein GCWU000182_02100 [Abiotrophia defectiva ATCC
           49176]
          Length = 352

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 78/323 (24%), Positives = 146/323 (45%), Gaps = 28/323 (8%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +      +      + +Y+ ++ I+I  Y + A GL+I+ G  GL+SL      AIGAY+
Sbjct: 28  IALFAFLIVFPMIFNNQYLLTVVIKIGSYAILAMGLNILTGYTGLVSLGHAGFVAIGAYT 87

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             I+  ++ ++ ++   +  + +G  G+++GLP+L+  G YL+I TL   EI + IL+ W
Sbjct: 88  ASIVAIKFNINFFIATVIGMIAAGIIGVLLGLPTLRVTGTYLSIITLGFGEIVKMILMNW 147

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G  G+    +    G                      +YY+++    ++A   L 
Sbjct: 148 ADVTGGTLGVKNIPKPSLFGFNFNVTNHG-------------LYYLMIVFVLITALFCLS 194

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L ++    A+  IR ++ A   +   +   K+ AF +S++   + GA ++     I P+ 
Sbjct: 195 LVKSKTGRAFMAIRADELASTMMGIPVTRYKILAFVISASICALGGALYSTLIGYIDPNT 254

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F F  + +++SIVILGGM +L  +   + ILI   E+   +  Y                
Sbjct: 255 FNFDVSTMILSIVILGGMGTLRGMFIGSIILIAFPEVSRFLMEY---------------R 299

Query: 321 TTLMVIALFLVILMRSHSLLRLR 343
             L    L L++  R   +L  +
Sbjct: 300 FVLYGAILVLMMRFRPQGILGWK 322


>gi|301383734|ref|ZP_07232152.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraE [Pseudomonas syringae pv. tomato Max13]
          Length = 437

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KYI ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 104 IIPLLIVVAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W  +P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLWFGEIIRLVLNN 223

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +F     R        +  +F F  +  +  IF+Y VL  +  
Sbjct: 224 WLSFTGGPNGVPVPSPTFFGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYTVLFLVVL 283

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 284 AVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 343

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 344 QGFVNPTSFTFFESALILAIVVLGGMGSTIGVVIAAFVLTVAPELLRSFSEY-------- 395

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  I + L+++ R   L+R
Sbjct: 396 -------RVLLFGILMVLMMIWRPRGLIR 417


>gi|295680766|ref|YP_003609340.1| ABC transporter [Burkholderia sp. CCGE1002]
 gi|295440661|gb|ADG19829.1| ABC transporter related protein [Burkholderia sp. CCGE1002]
          Length = 646

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 69/307 (22%), Positives = 140/307 (45%), Gaps = 16/307 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L+A  + L+            Y   +   I+IY +  +GL IVVG  G +SL     + +
Sbjct: 6   LVATAFVLIALAVFPVLSGNPYYIHLVETIMIYAILLFGLDIVVGYTGQVSLGHAGLFGV 65

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +L  + GL I++  P++ +++   G I+ LP+L+  G YLA+ TL    I Q +
Sbjct: 66  GAYTAGVLFMKLGLPIFVTAPLAILVTAGFGAILALPALRVSGPYLAMVTLAFGTILQIL 125

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           + +   +TNG  G+ +                           E+  Y+++  +   S  
Sbjct: 126 INEMDFLTNGPMGVKIPKPSLGARPM----------------NEVEYYWLVAALLVASLI 169

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++  + ++ +  A+  +RD+  A   +  ++   K+ AF +S+ F G+AG  ++ S   I
Sbjct: 170 VVHRVLKSHLGRAFEALRDSPIASDCMGVSVYRYKVYAFVISAGFAGLAGCLYSYSEQYI 229

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP+ + F   I+ +  +I+GG  + +     +AI++ + +L   ++ +   + +      
Sbjct: 230 SPNTYNFELTILFLLAIIMGGRKTRTGAVLGSAIIVLLPKLLDDIDMFRIVASVLAAAVV 289

Query: 317 NMRHTTL 323
                 L
Sbjct: 290 IGAGVAL 296


>gi|239978892|ref|ZP_04701416.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces albus J1074]
          Length = 588

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 83/347 (23%), Positives = 139/347 (40%), Gaps = 28/347 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V    +       T++     S+G  ILI+   A GL+IVVG  GLL L  V    +G
Sbjct: 239 VTVTAAFVSAFAFPFTQTSDAYTSVGTNILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 298

Query: 78  AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           AY+  ++           +  W  + + A+ S   G+I+G P+L+  GDYLAI TL   E
Sbjct: 299 AYTAALVSGSPNSPFDVHVPFWAAVLLGALASLIFGVIIGAPTLRLHGDYLAIVTLGFGE 358

Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           IF+  +      +      G      +  L     +           +      Y ++L 
Sbjct: 359 IFRIGMQNLDGTSGPDITNGPNGIPNIPDLEMFGFNFGESHTVLGVELGRFSNYYLLMLL 418

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  +   +     ++ I  AW  IR+++ A  ++       KL AFA+ +   G+AG   
Sbjct: 419 VTIVVVLVFRRSDQSRIGRAWVAIREDETAARAMGINAFRLKLLAFALGATLAGLAGTVQ 478

Query: 250 AASRDRISPDMFKFSENI-----IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A     ++P  +KF E++      +++ VILGGM ++S      A+L  +      M  Y
Sbjct: 479 AHVTYTVTPAQYKFVESMPPNSAFLLAAVILGGMGTVSGPLIGAALLYLIPAKLQFMADY 538

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                             L  IAL L++  R   L+  R      + 
Sbjct: 539 ---------------QLLLFGIALVLLMRFRPEGLVADRRKQLEFKE 570


>gi|220923604|ref|YP_002498906.1| ABC transporter-like protein [Methylobacterium nodulans ORS 2060]
 gi|219948211|gb|ACL58603.1| ABC transporter related [Methylobacterium nodulans ORS 2060]
          Length = 840

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 67/347 (19%), Positives = 127/347 (36%), Gaps = 36/347 (10%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
            R ++      + A+V   L    +G T +          ++++ +   GL+I+VG  GL
Sbjct: 2   TRTDRLALPAFVAALVVLPLGLQAIGLTLTS------ATDVVVFAVACLGLNILVGQTGL 55

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP-VSAMISGACGMIMGLPSLKFRGDYLAI 124
           +S      + +GAY+  I    +     +     + +      +++GL  L+ RG Y ++
Sbjct: 56  VSFGHGAFFGLGAYAAAISQRAFFPGSLVAPTLFALVFVALAALLVGLLVLRRRGVYFSL 115

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL +S +   +  +W  +T G++G     R                     +   +  Y
Sbjct: 116 LTLALSALSFTVAYRWTALTGGESGFGGVVRPA--------------LLGFDLGESVLWY 161

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            V+    F     +  LRR+ + +    IR+N++    L       KL AF VS+   G 
Sbjct: 162 GVVAACGFGVLYALARLRRSPVGSVLEAIRENEQRARFLGYPTTRYKLLAFTVSATVTGF 221

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG     +    S +    + +  ++++V++GGM SL+  A      I   EL       
Sbjct: 222 AGVLSVFTHRFASAEPLGIAFSGELLAMVVIGGMRSLAGPAIGALFFILFRELLSIWTGD 281

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +                    +     IL     L+ +      L R
Sbjct: 282 W---------------LFWFGLLFIGFILFSPDGLVGIGERILRLMR 313


>gi|290508913|ref|ZP_06548284.1| branched-chain amino acid transport system permease [Klebsiella sp.
           1_1_55]
 gi|289778307|gb|EFD86304.1| branched-chain amino acid transport system permease [Klebsiella sp.
           1_1_55]
          Length = 428

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 100/339 (29%), Positives = 160/339 (47%), Gaps = 22/339 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L +        + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 101 IMPLLAVLAIAFPFLASKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 160

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P+ A+++   G ++G P L+  GDYLAI TL   EI + +L  
Sbjct: 161 GLALGYQYLGLGFWAMLPLGAVMAVLAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 220

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V     F     R        +  FF    +  +  IF+Y VL  +  
Sbjct: 221 WVSFTGGPNGVPVPSPTLFGLEFTRRARDGGIPIHEFFHVSYNPNLKFIFLYAVLCLVVM 280

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   +   L R  I  AW  +R+++ A  ++    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 281 LVLLVKHRLTRMPIGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGIAGVFFASY 340

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL  G + Y        
Sbjct: 341 QGFVNPTSFTFFESALILAIVVLGGMGSTLGVVLAAFVLTVTPELLRGFDEY-------- 392

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                     L  + + ++++ R   L+R       L +
Sbjct: 393 -------RVLLFGVLMVVMMIWRPRGLVRTSRSGVALRK 424


>gi|288919852|ref|ZP_06414176.1| inner-membrane translocator [Frankia sp. EUN1f]
 gi|288348767|gb|EFC83020.1| inner-membrane translocator [Frankia sp. EUN1f]
          Length = 469

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 80/311 (25%), Positives = 137/311 (44%), Gaps = 31/311 (9%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI--------LGSRYGLSI 92
           ++  +I IY + A GL++VVG  GLL L  +  +AIGAY+             + + L+ 
Sbjct: 139 ALVSEIGIYALLALGLNVVVGYAGLLDLGYIAFFAIGAYTTAYLTSADAMPWHAPWQLNP 198

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           + ++P++ +++   G+++G P+L+ RGDYLAI TL   EI Q +      +T G  G++ 
Sbjct: 199 FFVLPIALLVAAVAGVVLGGPTLRLRGDYLAIVTLGFGEIVQLLANNADGVTGGPRGVFG 258

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
              L          +       S+ +  +  YY+L+ +  L   +     R+    AW  
Sbjct: 259 LPPLS---------VELPGVRYSWGLDPLPYYYLLIALIVLVMVVFGRWERSRTGRAWTA 309

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           IR ++ A  +     +  KL AFAV ++  G AG   A  +   +P  F    +++V++I
Sbjct: 310 IRQDEVAAEATGVATMRMKLLAFAVGASVSGFAGVVVATKQFF-NPQSFGLQASLLVLTI 368

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           VI GGM S   +     +L G   L               D              + L++
Sbjct: 369 VIFGGMGSRLGVVLGALVLQGTAFLLR-------------DTVPPADRFIYFGAVVVLMM 415

Query: 333 LMRSHSLLRLR 343
           + R   LL  R
Sbjct: 416 IFRPEGLLPPR 426


>gi|332298883|ref|YP_004440805.1| ABC-type transporter, integral membrane subunit [Treponema
           brennaborense DSM 12168]
 gi|332181986|gb|AEE17674.1| ABC-type transporter, integral membrane subunit [Treponema
           brennaborense DSM 12168]
          Length = 353

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 81/344 (23%), Positives = 149/344 (43%), Gaps = 35/344 (10%)

Query: 3   IFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
           +   ++ +   I    AV+  ++    +       Y   +     +  + A  ++I+ G 
Sbjct: 1   MMKNKILRNMLIPGSFAVLAVVVPGFLISLGVIDAYTAQIITLAGVNAIMAISVNIICGI 60

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G LSL      AIGAY+ +IL    G+ + + + ++A+++   G+++G P+LK +GDYL
Sbjct: 61  TGQLSLGQAGFMAIGAYTTIILTQTVGIPMPVSMIIAALVTVVFGILIGFPTLKLQGDYL 120

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           AI TL   EI + +L+ +K +T G  G                     RF +       F
Sbjct: 121 AIVTLGFGEIIRVMLVNFKSVTGGANG--------------------LRFTTILAARADF 160

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y+ ++G+  +   ++    R+    A   +R+++ A  S    +   K+  FAV+SA  
Sbjct: 161 AYFAVIGVLVVIIVLLQNFVRSTYGRAILAVREDEIAANSNGIGVFRYKMIGFAVASAVA 220

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+ GA +A     + PD+  F+ +I  +  V+LGGM S++    A  +L  + E    + 
Sbjct: 221 GIGGALYAPFIGFVKPDLASFNRSIDYLIFVVLGGMGSVTGSVIAAFVLTYLQEFLRFLQ 280

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
            Y                  +  + L  V+L R   LL  +  S
Sbjct: 281 DY---------------RLLIYPLILIFVMLFRPQGLLGTKEFS 309


>gi|171057676|ref|YP_001790025.1| ABC transporter-like protein [Leptothrix cholodnii SP-6]
 gi|170775121|gb|ACB33260.1| ABC transporter-related protein [Leptothrix cholodnii SP-6]
          Length = 593

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 49/323 (15%), Positives = 118/323 (36%), Gaps = 22/323 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  ++L   L      ++  +    I +Y + + GL ++ G  GL S        +GA
Sbjct: 8   LFIALVVLTALLPQLPVPEFWITQLNYIGLYAIVSLGLVLLTGVSGLTSFGQAAFVGLGA 67

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+   L +++ +S WL + +   I+    +++   +L+  G YL +AT+  +      + 
Sbjct: 68  YTTAYLTTQWAMSPWLTVFIGVGITVITALVLAAITLRMSGHYLPLATIAWALSLYYSMS 127

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
             + +                       +         +      +Y++  +  LSA  +
Sbjct: 128 NMEFL---------------GKYDGILGVPAMSLFGFSLASGRSYFYLIWIVALLSAVAV 172

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L  +    A R ++       ++  +    K+ AF +++    ++G  FA  +  ++P
Sbjct: 173 IRLLDSRSGRAIRALKGGVTMAEAMGISTYRYKVLAFVLAAILASLSGWLFAHLQRTVNP 232

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F  S+ I  + + +LGG+ ++       A++  + +    +                 
Sbjct: 233 SPFALSKGIEYLFMAVLGGIGNVWGAFTGAAVVKLLEDQLQVLLPRLIGG-------SGN 285

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
               +  I L +V+      L  
Sbjct: 286 YEIIVFGIVLVVVLKYAPQGLWP 308


>gi|39936868|ref|NP_949144.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009]
 gi|192292697|ref|YP_001993302.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|39650725|emb|CAE29248.1| putative permease of ABC transporter (high-affinity branched-chain
           amino acid transport) [Rhodopseudomonas palustris
           CGA009]
 gi|192286446|gb|ACF02827.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 443

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 117/337 (34%), Positives = 181/337 (53%), Gaps = 19/337 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++A    +  FL      +Q+YI  +GI +L YVM  WGL+IVVG  GLL L  V  YA+
Sbjct: 106 VVAPALLIFTFLVPVIFYNQRYILDLGILVLTYVMLGWGLNIVVGLAGLLDLGYVAFYAV 165

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAYSY +L + +GLS W+ +P++ +++   G+I+G P L+ RGDYLAI TL   EI + +
Sbjct: 166 GAYSYALLATNFGLSFWICLPLAGILAAFWGVILGFPVLRLRGDYLAIVTLAFGEIIRLV 225

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF----FRFPSSFVIYEIFMYYVLLGMCF 192
           +I W+ +T G  GI    R    G  +             P S     +F++Y++L +  
Sbjct: 226 IINWQTLTGGPNGISGIPRPTLFGIPLAPGPNGLAAQLGIPFSPTHRLVFLFYLILILAL 285

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           ++    + LRR  I  AW  +R+++ A  +L       KL+AFA  + F G AGAFFA  
Sbjct: 286 ITNWATIRLRRLPIGRAWEALREDEVACRALGINTTTTKLTAFATGAMFGGFAGAFFATR 345

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ISP+ F F E+ +V++IV+LGGM S   +A A   LIG  EL  G++ +        
Sbjct: 346 QGFISPESFTFQESALVLAIVVLGGMGSQLGVALAAVTLIGGFELFRGLDQF-------- 397

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
                     +  +A+ L+++ R   L+  R P+ +L
Sbjct: 398 -------RMLVFGMAMVLLMIWRPRGLIGHRAPTVYL 427


>gi|167564632|ref|ZP_02357548.1| branched-chain amino acid ABC tranpsorter, permease/ATP-binding
           protein [Burkholderia oklahomensis EO147]
          Length = 594

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 51/327 (15%), Positives = 118/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V    L    GA +  +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   AFWLFLVVLFALPALPGAVRVPEYWITLLNYIGLYAIVAIGLVMLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IGAY+   L + YG S WL +     ++    +++G  +++  G +L + T+       
Sbjct: 69  GIGAYATAYLTTAYGASPWLGLIAGIALTALVALVLGAVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +     GI     L   G T+ +                 +YYV+  +   +
Sbjct: 129 FLFGNLDWL-GKYDGINGIPALTVFGQTLDT--------------GRSLYYVIWVVVLAA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + +++ F  ++    ++G  +A  + 
Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTGWMRVAIFVYAAVLASISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  +  I  + + ++GG+  +        I+  + +    +      +   F  
Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVAHVWGAVLGAVIVTVLQDYLQTLLPKLLGAEGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + + L++      +  
Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313


>gi|312115667|ref|YP_004013263.1| ABC transporter [Rhodomicrobium vannielii ATCC 17100]
 gi|311220796|gb|ADP72164.1| ABC transporter related protein [Rhodomicrobium vannielii ATCC
           17100]
          Length = 661

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 74/290 (25%), Positives = 136/290 (46%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +  + A +  + LF F        Y   +   + IY +   GL IVVG  G +SL   
Sbjct: 3   RALPFIGAGLLAIGLFAFPFLAGQNSYYIHLVQMMAIYAILILGLDIVVGYTGQVSLGHA 62

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             + IGAY   ++   YGL +W  + V  +++G  G ++ +P+L+  G YLA+ TL    
Sbjct: 63  GLFGIGAYGAAVIFHHYGLGVWPGLLVGVIVTGIFGAVLAVPALRVIGPYLAMVTLAFGT 122

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I Q ++ +W  +TNG  G+ +           RS  +      +     +  YY+ + + 
Sbjct: 123 IIQIVINEWTGLTNGPLGVTLPPPRVVDFADWRSFWQGTLGLKAAEFQRLEFYYLCVLLM 182

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            ++  ++  + R+    A+  +RD+  A   +  ++   K+ AF VS+A  G+AGA F+ 
Sbjct: 183 LVAILVVNRVVRSQYGRAFEALRDSPIACDCMGVSVYRYKVYAFVVSAALAGLAGALFSW 242

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
           S   +SP+ + F  +I+ +  VILGG  S +       I++ +  +   +
Sbjct: 243 SERYVSPNTYNFELSILFLLAVILGGRKSRAGPLIGAFIIVYLPNVLSDI 292


>gi|108799984|ref|YP_640181.1| inner-membrane translocator [Mycobacterium sp. MCS]
 gi|108770403|gb|ABG09125.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Mycobacterium sp. MCS]
          Length = 390

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 78/354 (22%), Positives = 146/354 (41%), Gaps = 23/354 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
            R+ K+     +   +  L +F                 Q  +  + A GL++VVG  GL
Sbjct: 20  TRVQKWVVGAVVFLAIGLLPIFTPSWLDTPGISFGGTMAQFAMVAIIAIGLNVVVGQAGL 79

Query: 66  LSLNCVIAYAIGAYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMG 111
           L L  V  YA+GAY+  +L S                  +    +P++  ++   G+I+G
Sbjct: 80  LDLGYVGFYAVGAYTVALLTSPSSPWNQAGPGGWFTTDWAWLACVPLAMAVTALAGLILG 139

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
            P+L+ RGDYLAI TL   EI + +      +TNG  G+   +      +       F R
Sbjct: 140 TPTLRLRGDYLAIVTLGFGEIIRLLADNLSDVTNGPRGLNEVEYPRVGESERLPEGVFSR 199

Query: 172 FPSSF-VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
             S+    Y  + +++ L +      ++  L R+ +  AW  +R+++ A   +       
Sbjct: 200 ANSTGEANYGTWWFWLGLLLIVGILLLVGNLERSRVGRAWVAVREDEDAAEVMGVNTFRF 259

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           KL AF + +A  G++GA +A     ++P  F    +++ +  V+LGG  +   +     I
Sbjct: 260 KLWAFVIGAAIGGLSGALYAGQVQYVAPPTFNIINSMLFLCAVVLGGQGNKLGVIFGAFI 319

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           ++ +     G++F           +          +AL ++++ R   L   R 
Sbjct: 320 IVYLPNRLLGVHF--------LGINLGDLKYLFFGLALVVLMIFRPQGLFPARQ 365


>gi|148549945|ref|YP_001270047.1| inner-membrane translocator [Pseudomonas putida F1]
 gi|148514003|gb|ABQ80863.1| inner-membrane translocator [Pseudomonas putida F1]
          Length = 433

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 99/329 (30%), Positives = 158/329 (48%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 106 IIPALVVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 165

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 166 GLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 225

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+      +F     R        +  FF F  +  +  +F+Y VL  +  
Sbjct: 226 WLSFTGGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNANLKFVFIYAVLFMVVL 285

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  +  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA  
Sbjct: 286 AVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATY 345

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 346 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 397

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  + + L+++ R   L+R
Sbjct: 398 -------RVLLFGVLMVLMMIWRPRGLIR 419


>gi|330502354|ref|YP_004379223.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           mendocina NK-01]
 gi|328916640|gb|AEB57471.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           mendocina NK-01]
          Length = 419

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 96/342 (28%), Positives = 169/342 (49%), Gaps = 26/342 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  +++   +    + +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 94  IILAMVMVALVWPFFASRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAY 153

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           SY IL   +GL  W+ +P++ M++   G ++G P L+ RGDYLAI TL   EI + +L  
Sbjct: 154 SYAILAHYFGLGFWICLPLAGMMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRN 213

Query: 140 WKPITNGKAGIYVAD----------RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
              +T G  G+ +A+              +   + +   +F    +     IF+Y + L 
Sbjct: 214 LTDLTGGPNGLSIANENKPTLFGLSFERRVPADMPTFHGYFEMAYNSQYKVIFLYLIALL 273

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  ++  L R  I  AW  +R+++ A  +L       KLSAF + ++  G AG+FF
Sbjct: 274 LVLLTLFLVNRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTIGASLAGFAGSFF 333

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +++ + E+            
Sbjct: 334 AARQGLVTPESFTFIESAMILAIVVLGGMGSQLGVILAAIVMVMLQEM------------ 381

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                  +     +  + +  +++ R   LL ++ P   L+R
Sbjct: 382 ----RELSEYRMLIFGLVMIFMMVWRPQGLLPMQRPHLELKR 419


>gi|120403827|ref|YP_953656.1| inner-membrane translocator [Mycobacterium vanbaalenii PYR-1]
 gi|119956645|gb|ABM13650.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 391

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 81/361 (22%), Positives = 145/361 (40%), Gaps = 23/361 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
            R  K+   + L A +    LF                 Q  +  + A GL++VVG  GL
Sbjct: 22  TRAQKWVFGIILFAGIALSPLFTPGFIDTPGISFGGTMAQFAMVAIIAIGLNVVVGQAGL 81

Query: 66  LSLNCVIAYAIGAYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMG 111
           L L  V  YA+GAY+  +L S                  +    +P++  ++   G+I+G
Sbjct: 82  LDLGYVGFYAVGAYTVALLTSPESPWNKLGPTGFFSTPWAWLSCVPLAMAVTALSGLILG 141

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT-TVRSLIRFF 170
            P+L+ RGDYLAI TL   EI + +      ITNG  G+      +FL +      +   
Sbjct: 142 TPTLRLRGDYLAIVTLGFGEIIRLLADNLADITNGPRGLNEVAFPHFLESDQHPEGVFSV 201

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                   Y  + +++ L +      ++  L R+ +  AW  +R+++ A   +       
Sbjct: 202 SNSGGDANYGTWWFWLGLILIVGILLLVGNLERSRVGRAWIAVREDEDAAEVMGVNAFKF 261

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           KL AF + +A  G++GA +A     ++P  F    +++ +  V+LGG  +   +     I
Sbjct: 262 KLWAFTIGAAIGGLSGALYAGQVQYVAPPTFNIINSMLFLCAVVLGGQGNKLGVILGAFI 321

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           ++ +     G++F                      +AL ++++ R   L   R       
Sbjct: 322 IVYLPNRLLGVHF--------LGIDMGNLKYLFFGLALVVLMIFRPQGLFPARQHLLTYA 373

Query: 351 R 351
           R
Sbjct: 374 R 374


>gi|316935056|ref|YP_004110038.1| ABC transporter-like protein [Rhodopseudomonas palustris DX-1]
 gi|315602770|gb|ADU45305.1| ABC transporter related protein [Rhodopseudomonas palustris DX-1]
          Length = 589

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 65/334 (19%), Positives = 124/334 (37%), Gaps = 27/334 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + ++  +L   A +  L L   +       +   +   I +  + A GL ++ G  GL S
Sbjct: 1   MTRWLPVLLFAAAMTALPLIPGIPP-----FWIVLLDNIGLAALVAMGLVLLTGVGGLTS 55

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                    GAY+   + + YGLS WL +P S  ++G   +++GL +++  G YL + T+
Sbjct: 56  FGQAAFCGFGAYTTAYITTVYGLSPWLALPASLAVAGIAAVLLGLMTVRLSGHYLPLGTI 115

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                   +  K   +     GI     L      +                   +Y+V+
Sbjct: 116 AWGIALYYLFSKLDFL-GRNDGISRVPPLSIGPIDMYDPH--------------SIYFVI 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             M  +SA + + L  +    A R +R    A  +       AKL  F  ++   G++G 
Sbjct: 161 WAMVLISAVLTMNLLDSRTGRAIRALRRGHVAAEAFGVQTARAKLLVFIYAAVLAGLSGW 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A  +  ++P  F     I  + I ++GG   +       AI+I + E+  G     F 
Sbjct: 221 LYAHFQRNVNPTPFGPQAGIEYLFIAVVGGAGYVWGGVLGAAIVIILKEVLQGYLPLLFG 280

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                          +  I L +++ +    +  
Sbjct: 281 GQ-------GQLEIIVFGILLVVLLQLAPGGVWP 307


>gi|113868982|ref|YP_727471.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113527758|emb|CAJ94103.1| ABC-type transporter, permease component: HAAT family [Ralstonia
           eutropha H16]
          Length = 385

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 93/345 (26%), Positives = 154/345 (44%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +  L+  +   L   F   T    Y   +    L+Y+M A GL+IVVG  GLL L  +  
Sbjct: 22  LAALIGFLVIALCAPFFVQTLGGNYWVRVLDFALLYIMLALGLNIVVGFAGLLDLGYIAF 81

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY   +LGS +                 LS+W ++P++ +++   G+++G P+LK 
Sbjct: 82  YAVGAYLMALLGSPHLANQFEWIQQLFPTGIHLSMWFVLPIAILVAATFGVLLGAPTLKL 141

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +        +         
Sbjct: 142 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITAVDPVHIFGFDFSKSHEIFGLKF 201

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+L+ +  +   + L L+ + I  A+  IR+++ A  ++       KL AFA+
Sbjct: 202 TPVFMYYYLLVFLVIVIVFVSLRLQTSRIGRAFVAIREDEIAAKAMGINTRNIKLLAFAM 261

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G +GA F A +  +SP+ F   E+I V++IV+LGGM  +  +     +L+G  EL
Sbjct: 262 GASFGGASGAVFGAFQGFVSPESFTLWESIYVLAIVVLGGMGHIPGVILGGVLLVGFQEL 321

Query: 298 CCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              +       L         +    L  +AL  V+L R   +  
Sbjct: 322 LRVVAEPMQTGLFGHVIVDAEVLRQLLFGLALVGVMLYRPAGIWP 366


>gi|239623157|ref|ZP_04666188.1| ABC transporter [Clostridiales bacterium 1_7_47_FAA]
 gi|239522524|gb|EEQ62390.1| ABC transporter [Clostridiales bacterium 1_7_47FAA]
          Length = 336

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 75/323 (23%), Positives = 133/323 (41%), Gaps = 29/323 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++  L++ + L     Q  I      I++Y   A  L+++ G  G   L     +AIGA
Sbjct: 16  VLLALLVISIVLPFVIKQALILRYICTIMMYATLAGSLNVINGYSGQTCLGQAGFFAIGA 75

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+   L    G+  W+ +PV+ +++   G+I+ LP+LK  G YL+I TL  SEI + I  
Sbjct: 76  YTCAALSKNVGVDFWIALPVAGILAALVGLIVSLPTLKLSGIYLSIVTLGASEIIRIIAQ 135

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W P+T G  GI       F G  +                  + Y++ L +  +   I 
Sbjct: 136 TWTPVTGGALGIKQIPYPNFFGLEMFK--------------PKYYYFIFLIIGVVFLFIT 181

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + ++ +  AW  IR++Q A  SL       K   F   + + G+ GA +A   + I  
Sbjct: 182 DRVLKSRVGRAWMAIREDQVAAKSLGVETSKCKCMNFMYGAFWAGIIGAAYAPFVNYIES 241

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F       V+++V++GG  +L      + I+  + E    +                 
Sbjct: 242 SQFTTDTGFNVLAMVVIGGQGTLLGPILGSTIVTILTEALRFLE---------------N 286

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
               +  I + L++ +R   L+ 
Sbjct: 287 WRYVIYAIIIILMMWVRPQGLMG 309


>gi|218782215|ref|YP_002433533.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218763599|gb|ACL06065.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 396

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 97/321 (30%), Positives = 159/321 (49%), Gaps = 26/321 (8%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            +  + +F       +  Y  ++   +LIYVM   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 91  AIVLVGIFALSIPFWADMYNTNIMTNVLIYVMLGLGLNIVVGLAGLLDLGYVAFYAVGAY 150

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L   +G + W+++P++  +  A G+ +G P L+ RGDYLAI TL   EI + +L  
Sbjct: 151 AYALLNHHFGANFWVILPMAGFLGAAFGVTLGFPVLRLRGDYLAIVTLGFGEIIRLVLEN 210

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W   + G +GI   DR  F G  +    +             FMYYV+L +  L+   + 
Sbjct: 211 WNEFSMGPSGIANIDRPPFFGIKMDLFQKTD-----------FMYYVVLVLAILTIIAVT 259

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L+ + I  AW  +R+++ A  ++       KL AFA+ + +  MAG  FAA    I+P 
Sbjct: 260 RLKNSRIGRAWIALREDEIACQAMGVDRTKTKLMAFALGATWASMAGVVFAAKSTFINPP 319

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F F E+++++ IV+LGGM S+  +    +I+I + E     + Y               
Sbjct: 320 SFSFWESVLILVIVVLGGMGSVVGVILGASIIILLPEYFRQFSEY--------------- 364

Query: 320 HTTLMVIALFLVILMRSHSLL 340
              L   A+ L+++ R   ++
Sbjct: 365 RMILFGGAMVLMMVFRPTGIV 385


>gi|262040516|ref|ZP_06013757.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259042109|gb|EEW43139.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 426

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 104/341 (30%), Positives = 160/341 (46%), Gaps = 23/341 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  LL+          +    +    +IY++   GL++VVG  GLL L     YAIGA
Sbjct: 91  LFLIALLVIAVAWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ +L   YGL  W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +  F G             +   FF          IF+Y V L 
Sbjct: 211 NNTEITGGPNGISQIPKPTFFGLEFSRSAREGGWDTFSNFFGVKYDPSDRVIFLYLVALL 270

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L   +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  F
Sbjct: 271 LVVLILFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLF 330

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  +SP+ F F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y     
Sbjct: 331 AARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEYSM--- 387

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        L  + + ++++ R   LL +      L+
Sbjct: 388 -----------LMLGGLMVLMMMIWRPQGLLPMTRVQLKLK 417


>gi|325273658|ref|ZP_08139871.1| inner-membrane translocator [Pseudomonas sp. TJI-51]
 gi|324101204|gb|EGB98837.1| inner-membrane translocator [Pseudomonas sp. TJI-51]
          Length = 433

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 98/329 (29%), Positives = 157/329 (47%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 106 IIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 165

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 166 GLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 225

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+      +      R        +  FF F  +  +  +F+Y VL  +  
Sbjct: 226 WLSFTGGPNGMPAPSPTFLGLEFGRRAKDGGVPIHEFFGFAYNPNLKFVFIYAVLFMVVL 285

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L R  +  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA  
Sbjct: 286 AVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATY 345

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y        
Sbjct: 346 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------- 397

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L  + + L+++ R   L+R
Sbjct: 398 -------RVLLFGVLMVLMMIWRPRGLIR 419


>gi|269925704|ref|YP_003322327.1| inner-membrane translocator [Thermobaculum terrenum ATCC BAA-798]
 gi|269789364|gb|ACZ41505.1| inner-membrane translocator [Thermobaculum terrenum ATCC BAA-798]
          Length = 398

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 159/369 (43%), Gaps = 34/369 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGAT---KSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           R +K + +   + ++  L     +           +      I+ Y++ A GL+IVVG  
Sbjct: 17  RKDKVNTVTATIVILAALTWPWVVDPLMRLVLHFSMIDQMFPIIAYILLALGLNIVVGYA 76

Query: 64  GLLSLNCVIAYAIGAYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMI 109
           GLL L     +AIGAY+  IL S                 ++ W  + ++  I+  CG+I
Sbjct: 77  GLLDLGYAAFFAIGAYTIAILTSPRSPVAQFLSSNMPFLHVNFWFSLILAFFITAICGVI 136

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           +G P+L+ RGDYLAI TL   EI   I +    IT G+ G+   D+    G  +      
Sbjct: 137 LGAPTLRLRGDYLAIVTLGFGEIVPVIFLNAHSITYGEQGLNAIDQPVIFGFRL------ 190

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                S     I  YY+L+ +  +   I   LR + I  AW  +R+++ A  S+   ++ 
Sbjct: 191 ----GSGPQSTIAWYYLLIAIGAILIFIARRLRDSRIGRAWMAMREDEIAATSMGIDLVR 246

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            KL AFA+ ++F G  G  FA+     +P  F+FS +++++ +VILGGM ++  +     
Sbjct: 247 TKLLAFAMGASFSGFVGVMFASRYSFAAPSQFEFSTSVLLLCMVILGGMGNIWGVIVGGF 306

Query: 290 ILIGVVELCCGMNFYYFNSL-------LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +L     +       +  +L          +         +  + L +++L+R   +L  
Sbjct: 307 LLGLFDRVLADKISEWGQTLGERTNWSFLLNLDLTKYRYLIFGLTLVIMMLLRPEGILPS 366

Query: 343 RTPSNFLER 351
                 L  
Sbjct: 367 AERMAELHE 375


>gi|295839496|ref|ZP_06826429.1| branched chain amino acid transport permease [Streptomyces sp.
           SPB74]
 gi|197699383|gb|EDY46316.1| branched chain amino acid transport permease [Streptomyces sp.
           SPB74]
          Length = 599

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 76/351 (21%), Positives = 134/351 (38%), Gaps = 34/351 (9%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            +++    +  +    T+       +G  ILI+   A GL++VVG  GLL L  V    +
Sbjct: 240 AVSLAAMFVAAICFPFTQDNDTYALIGTNILIFATVALGLNVVVGLAGLLDLGYVAFLGV 299

Query: 77  GAYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           GAY+  ++               L +   A +S   G+++G P+L+ RGDYLAI TL   
Sbjct: 300 GAYTAALVSGSPQSSIGVHFPFPLAVLTGAAVSLVFGVVIGAPTLRLRGDYLAIVTLGFG 359

Query: 131 EIFQNILIKW-----KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           EIF+  +          + NG  G+     L   G            P          + 
Sbjct: 360 EIFRITMNNLNGNSGPDLVNGSQGVPNIPDLELFGFKFGEAHDVLGLPLGRSGN---YFL 416

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++L    +   +     ++ I  AW  IR+++ A  ++       KL AFA+ +   G+A
Sbjct: 417 LMLLFTAIVLLVFHRSGQSRIGRAWVAIREDETAASAMGINGFRLKLLAFALGATLAGLA 476

Query: 246 GAFFAASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G   A     ++P+ ++F+      +  +I+ VILGGM +++      A+L  + E    
Sbjct: 477 GTVQAHVNYSVTPEQYQFAGTAPPNSAFLIAAVILGGMGTITGPLIGAALLFLIPEKLEF 536

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           M  Y                           + +R   ++  R        
Sbjct: 537 MQKYQLLLFGLALILL---------------MRLRPEGIVPDRRKQLEFHE 572


>gi|169629709|ref|YP_001703358.1| high-affinity branched-chain amino acid ABC transporter (LivM)
           [Mycobacterium abscessus ATCC 19977]
 gi|169241676|emb|CAM62704.1| High-affinity branched-chain amino acid ABC transporter (LivM)
           [Mycobacterium abscessus]
          Length = 390

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 73/359 (20%), Positives = 137/359 (38%), Gaps = 22/359 (6%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  ++   +   A++  L ++              +  Q  +  + A GL++VVG  GLL
Sbjct: 22  RPVQWVYGVVGFALLALLPVWKIPYLDTPNTSFGGVMAQFAMVALIAIGLNVVVGQAGLL 81

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLS--------------IWLLIPVSAMISGACGMIMGL 112
            L  V  YAIGAY+  +L S                       +P++  I+   G+I+G 
Sbjct: 82  DLGYVGFYAIGAYTVALLTSPDSPWNRMGTSAFFSSDWAWLSCLPIAVAITACFGLILGT 141

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
           P+L+ RGDYLAI TL   EI + +          +    VA             +     
Sbjct: 142 PTLRLRGDYLAIVTLGFGEIIRLLADNLDVTNGPRGLHKVAYPHVGEQHVHGGGVFSSAN 201

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
               + Y ++ Y++ L +      ++  L R+ +  +W  IR+++ A   +       KL
Sbjct: 202 SGGHLNYGVWWYWLGLCLIAAVLVLMGNLERSRVGRSWVAIREDEDAAEMMGVPTFRFKL 261

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
            AF + ++  G++GA +A     ++   F    +++ +  V+LGG  +   +     I++
Sbjct: 262 WAFVIGASIGGLSGALYAGQVQYVASPTFNIINSMLFLCAVVLGGQGNKLGVVVGAFIIV 321

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            +     G+                        +AL +++L R   L           R
Sbjct: 322 YLPNRLLGVQ--------VQGIDLGNLKYLFFGLALVVLMLFRPQGLFPAHQKLMAYWR 372


>gi|311106494|ref|YP_003979347.1| high-affinity branched-chain amino acid transport system permease
           BraE [Achromobacter xylosoxidans A8]
 gi|310761183|gb|ADP16632.1| high-affinity branched-chain amino acid transport system permease
           protein BraE [Achromobacter xylosoxidans A8]
          Length = 411

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 95/334 (28%), Positives = 154/334 (46%), Gaps = 24/334 (7%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +    + +    +   +LIYVM   GL+IVVG  GLL L  V  YA+GAY+Y +L  
Sbjct: 93  IAVIWPFFAGRSSVDIATLVLIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGAYTYALLYH 152

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G S W  +P +  +S   G I+G P L+ RGDYLAI TL   E+ + +LI    +T G
Sbjct: 153 WGGWSFWEALPFAGAMSALFGFILGFPVLRLRGDYLAIVTLGFGEMIRLLLINLNTLTGG 212

Query: 147 KAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
             GI    +    G  +          +   F  +        +++Y + L +   +  +
Sbjct: 213 PDGISGIPKPTVFGMEMTRRASTEGGTTFHEFMGWTFQNQHMVVYLYLMALLLALATLFV 272

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L R  +  AW  +R+++ A  SL       KLSAF + + F G  GAFFAA +  ++
Sbjct: 273 STRLIRMPVGRAWEALREDEIACRSLGLNPTRIKLSAFTLGAMFAGFGGAFFAARQGMVN 332

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+      Y             
Sbjct: 333 PESFTFIESALILAIVVLGGMGSQVGVILAAVLLTVLPEVAREFAEY------------- 379

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                +  + + L+++ R   LL ++ P   L +
Sbjct: 380 --RMLMFGLVMVLMMMWRPQGLLPMKRPHVELAK 411


>gi|46202078|ref|ZP_00208373.1| COG4177: ABC-type branched-chain amino acid transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 415

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 172/346 (49%), Gaps = 23/346 (6%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
              +  +         +      S + +      +LIYVM  WGL+IVVG  GLL L  V
Sbjct: 81  RAAMVYVGWAMVAFALVLPFLPFSGRNLVDKATLVLIYVMLGWGLNIVVGLAGLLDLGFV 140

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             YA+GAYSY +L   +GLS W+ +P++ +++ + G+++G P L+ RGDY+AI T+ + E
Sbjct: 141 AFYAVGAYSYALLSQTFGLSFWVCLPLAGLLAASFGLVLGFPVLRLRGDYIAIVTMGLGE 200

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFM 183
           I + IL  W+ +T G  GI   +R  F G +         R    FF    S      F+
Sbjct: 201 IIRVILQNWQDVTGGPNGISGIERPSFFGLSFKMVPPEGSRGFAEFFGLEYSADHRVTFL 260

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           Y+++L +  L+  I L +RR  +  AW  +R+++ A  SL       KLSAFA  + F G
Sbjct: 261 YFLILALALLTNVITLRIRRLPVGRAWEALREDEIACRSLGINPTLVKLSAFATGAMFAG 320

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
            AG+FFA  +  ISP+ F F E+ ++++IV+LGGM S   I  A  +L+G+ E    +  
Sbjct: 321 FAGSFFATRQGFISPESFTFIESAVILAIVVLGGMGSQIGIVLAALLLVGLPEWFREL-- 378

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
                                  A+ L++L +   LL  R P+  L
Sbjct: 379 -------------QQFRMLAFGGAMVLIMLWKPAGLLSTREPTIRL 411


>gi|167571774|ref|ZP_02364648.1| branched-chain amino acid ABC tranpsorter, permease/ATP-binding
           protein [Burkholderia oklahomensis C6786]
          Length = 594

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/327 (15%), Positives = 118/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V    L    GA +  +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   AFWLFLVVLFALPALPGAVRVPEYWITLLNYIGLYAIVAIGLVMLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IGAY+   L + YG S WL +     ++    +++G  +++  G +L + T+       
Sbjct: 69  GIGAYATAYLTTAYGASPWLGLIAGIALTALVALVLGAVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +     GI     L   G T+ +                 +YYV+  +   +
Sbjct: 129 FLFGNLDWL-GKYDGINGIPALTVFGQTLDT--------------GRSLYYVIWVVVLAA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + +++ F  ++    ++G  +A  + 
Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGVMAEAMGVNTGWMRVAIFVYAAVLASISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  +  I  + + ++GG+  +        I+  + +    +      +   F  
Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVAHVWGAVLGAVIVTVLQDNLQTLLPKLLGAEGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + + L++      +  
Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313


>gi|319792077|ref|YP_004153717.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315594540|gb|ADU35606.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 402

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 95/358 (26%), Positives = 166/358 (46%), Gaps = 17/358 (4%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K  K L L  +    +L L L           +    L+YV+ A GL+IVVG  GLL L 
Sbjct: 2   KNSKNLALYVIGAIAVLALPLLLQMQGNAWVRIADIALLYVLLALGLNIVVGYAGLLDLG 61

Query: 70  CVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLP 113
            V  +A+GAY + ++GS +                  S+ ++IP++ +++G  G+++G P
Sbjct: 62  YVAFFAVGAYLFALMGSSHLTETFPWFAQMFPNGLHTSLLIVIPLALVVAGVLGVLLGAP 121

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
           +LK RGDYLAI TL   EI +  L       N   G      +  +      L + ++F 
Sbjct: 122 TLKLRGDYLAIVTLGFGEIIRVFLNNLDQPVNITNGPKGITAIDSIKFWGLDLGKAWKFD 181

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
              +      YY+ L +   +  I   L+ + I  AW  IR+++ A  ++       KL 
Sbjct: 182 GFTISSVSLYYYLFLALVIATIIISHRLQVSRIGRAWMAIREDEIAAKAMGINTRNMKLL 241

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
           AF + ++F G++GA FAA +  +SP+ F   E+++++++V+LGG+  L  +     +L  
Sbjct: 242 AFGMGASFGGVSGAMFAAFQGFVSPESFSLMESVMIVAMVVLGGIGHLPGVILGAVLLAA 301

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           + E+   +      SL       ++     + +A+ +++LMR   L         L R
Sbjct: 302 LPEVLRYVAGP-LQSLTDGRLDASILRQLFIALAMIVIMLMRPRGLWPSPEHGKTLAR 358


>gi|187477581|ref|YP_785605.1| branched-chain amino acid ABC transporter ATP-binding/permease
           [Bordetella avium 197N]
 gi|115422167|emb|CAJ48691.1| high-affinity branched-chain amino acid transport ATP-binding
           protein LivG [Bordetella avium 197N]
          Length = 612

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/325 (17%), Positives = 120/325 (36%), Gaps = 22/325 (6%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L + + +LL        + ++  +    I +  + A GL ++ G  GL S        +
Sbjct: 4   ILLIAFIVLLAALPALPVTPEFWITQLNYIGLASLVALGLVLLTGVGGLTSFGQAAFVGM 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+   L ++YG S WL +    +I+GA    +G+ +L+  G YL + T+        +
Sbjct: 64  GAYTTAYLTTQYGTSPWLALVAGLIITGALAYFLGVITLRLSGHYLPLGTIAWGLSLFYL 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                 +     GI   + L   G ++                   +YY++     L+  
Sbjct: 124 FGNLDFL-GKHDGIAGIEPLSIFGVSLADGRH--------------IYYLIWVWVLLALW 168

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               L  +    A R ++       S+       K   F  ++    ++G  +A  +  +
Sbjct: 169 ATRNLLSSRPGRAIRALKSGAGMAESMGVNTARYKTIIFVWAALLACVSGWLYAHMQRAV 228

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP  F  +  I  + + ++GG   +      +A+++G+ +          N+   F    
Sbjct: 229 SPSPFGLNYGIEYLFMAVIGGAAHVWGALLGSAVILGLKDQLQNWLPKLLNTDTNF---- 284

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                    + + L++   S+ L  
Sbjct: 285 ---ELIAFGVLMILMLQYASNGLWP 306


>gi|269127070|ref|YP_003300440.1| inner-membrane translocator [Thermomonospora curvata DSM 43183]
 gi|268312028|gb|ACY98402.1| inner-membrane translocator [Thermomonospora curvata DSM 43183]
          Length = 393

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 76/316 (24%), Positives = 139/316 (43%), Gaps = 19/316 (6%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             +   +   I ++++ A GL+IVVG  GLL L  V  +A+G Y+  I G++YG + W +
Sbjct: 67  SDWATVLFYPIGVFILLAIGLNIVVGQAGLLDLGYVAFFAVGGYTMAIFGTKYGWNFWEI 126

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + V  ++S   G+I+G P+L+ RGDYLAI TL   EI +      + +   +    +   
Sbjct: 127 LIVGVVLSAISGLILGAPTLRLRGDYLAIVTLGFGEIVRITANNSEYVNGPRGIAGIPHP 186

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                  +  +          V+     YY+L+ +  L+      L ++ +  AW  IR+
Sbjct: 187 PSLSEVEIFGVQPLKY----GVLDPRPYYYLLVALIVLTIIFAKRLEKSRVGRAWAAIRE 242

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A   +       KL+AFA+ +A  G  G  +A+    I P+ F F  +  +++ V+L
Sbjct: 243 DEDAAELMGVPTFRFKLAAFAIGAAIGGATGVVWASKVISIIPNNFPFILSATILAAVVL 302

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  ++  +     ++  + E   G+  Y                  +   AL  ++ +R
Sbjct: 303 GGSGNIPGVMLGAFLVAWLPERFRGLEDY---------------RVLIFGAALVAMMALR 347

Query: 336 SHSLLRLRTPSNFLER 351
              +L  R     L  
Sbjct: 348 PEGILPSRQRKAELAE 363


>gi|119896604|ref|YP_931817.1| ABC transporter ATP-binding/permease [Azoarcus sp. BH72]
 gi|119669017|emb|CAL92930.1| ABC transporter ATP-binding/permease protein [Azoarcus sp. BH72]
          Length = 597

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/332 (14%), Positives = 109/332 (32%), Gaps = 31/332 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+   L  L +       +  ++   I +Y M A GL ++ G  GL S        +GA
Sbjct: 6   LVLGVFLALLAVAPLVLPPFYVTLLNYIGLYAMVALGLVLLTGVGGLTSFGQAAFVGLGA 65

Query: 79  YSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
           Y+  +           +  G S WL + V    +    +++G  +LK  G YL + T+  
Sbjct: 66  YTTALLCTATELPGWLAWAGGSPWLALVVGLAFTAVVAVVLGSLTLKLSGHYLPLGTIAW 125

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 +    + +  G  G+     +   G  +                   +YY++  
Sbjct: 126 GISLYFLFGTMESL-GGHTGLTGIPPISIFGWVLDQGEE--------------IYYLIWV 170

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
               +      L  +    A R ++       ++      +++  F +++     +G  +
Sbjct: 171 FLLAAVFTTQNLLDSREGRAIRALKGGMVMAEAMGVDTSRSRMIIFVIAALHACASGWLY 230

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A  +  ++P  F     I  + + ++GG   +        ++  + +    +    F   
Sbjct: 231 AHMQRFVNPTPFGLHIGIEYLFMAVVGGAGHVWGALVGAGVITVLKQWLQDLLPRLFGQS 290

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             F          +  + + +V+      L  
Sbjct: 291 GNF-------EVIVFGLMMVIVLQRARDGLWP 315


>gi|330826230|ref|YP_004389533.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|329311602|gb|AEB86017.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 358

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 88/329 (26%), Positives = 155/329 (47%), Gaps = 17/329 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---------- 88
              +    L+YVM A GL+IVVG  GLL L  V  YA+GAY + +L S +          
Sbjct: 29  WVRIADLALLYVMLALGLNIVVGYAGLLDLGYVAFYAVGAYMFGLLASPHLTENFAWFAQ 88

Query: 89  ------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
                  LS+W +IP++ +++   G+++G+P LK RGDYLAI TL   EI +  +     
Sbjct: 89  HFPDGMHLSLWAVIPLALVLAATTGVLLGIPVLKLRGDYLAIVTLGFGEIIRIFMNNLDH 148

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
             N   G     ++  +      L R        +      YY+ L +  ++  I   L+
Sbjct: 149 PVNLTNGPKGLGQIDSVKVFGLDLGRRLELFGYDINSVTLYYYLFLALVLVTIVICYRLQ 208

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            + I  AW  IR+++ A  ++       KL AF + ++F G+AGA F A +  +SP+ F 
Sbjct: 209 DSRIGRAWMAIREDEIAAKAMGINTRNMKLLAFGMGASFGGVAGAMFGAFQGFVSPESFS 268

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
             E+++++++V+LGG+  +  +     +L  + E+   +      ++       ++    
Sbjct: 269 LMESVMIVAMVVLGGLGHIPGVILGAVLLSALPEVLRYVAGP-LQAMTDGRLDASILRQL 327

Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLER 351
           L+ +A+ +V+L+R   L         L R
Sbjct: 328 LIALAMIIVMLLRPRGLWPSPEHGKSLAR 356


>gi|167838439|ref|ZP_02465298.1| branched-chain amino acid ABC tranpsorter, permease/ATP-binding
           protein [Burkholderia thailandensis MSMB43]
          Length = 594

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/327 (14%), Positives = 117/327 (35%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V    L    GA +  +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   AFWLFLVVLFALPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IGAY+   L + +G S WL +    +++    +++G  +++  G +L + T+       
Sbjct: 69  GIGAYATAYLTTAHGASPWLGLIAGVVLTALVALVLGAVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +     GI     L                    +     +YY++  +   +
Sbjct: 129 FLFGNLDWL-GKYDGINGIPALAVF--------------GQALDTGRSLYYLIWIVVLAA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + +++ F  ++    ++G  +A  + 
Sbjct: 174 VVSVQNLLNSRPGRAIRALRGGSLMAEAMGVNTGWMRVAIFVHAAVLASISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  +  I  + + ++GG+  +       AI+  + +    +      +   F  
Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVAHVWGALLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + + L++      +  
Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313


>gi|152970836|ref|YP_001335945.1| high-affinity branched-chain amino acid transport [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238895343|ref|YP_002920078.1| ABC-type high-affinity branched-chain amino acid transport system
           permease component [Klebsiella pneumoniae NTUH-K2044]
 gi|150955685|gb|ABR77715.1| high-affinity branched-chain amino acid transport [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238547660|dbj|BAH64011.1| ABC-type high-affinity branched-chain amino acid transport system
           permease component [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 428

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 100/339 (29%), Positives = 161/339 (47%), Gaps = 22/339 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L+    +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 101 IIPLLVGLAIVFPFLATKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 160

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P+ A+++   G ++G P L+  GDYLAI TL   EI + +L  
Sbjct: 161 GLALGYQYLGLGFWAMLPLGAVMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 220

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V     F     R        +  FF    +  +  IF+Y VL  +  
Sbjct: 221 WVSFTGGPNGVPVPSPTLFGLEFTRRAKDGGIPIHEFFHVSYNPNLKFIFLYAVLCLVVM 280

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   +   L R  I  AW  +R+++ A  ++    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 281 LVLLVKHRLTRMPIGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGIAGVFFASY 340

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL  G + Y        
Sbjct: 341 QGFVNPTSFTFFESALILAIVVLGGMGSTLGVVLAAFVLTVTPELLRGFDEY-------- 392

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                     L  + + ++++ R   L+R       L +
Sbjct: 393 -------RVLLFGVLMVMMMIWRPRGLVRTSRSGVALRK 424


>gi|297566883|ref|YP_003685855.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
 gi|296851332|gb|ADH64347.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
          Length = 463

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 153/365 (41%), Gaps = 28/365 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +   +LL     A  +  ++  +GIQI IY   A GL++VVG  GLL L     +
Sbjct: 94  WIKGLLGAAILLISIPIAGFANSFLFELGIQIGIYAAMALGLNVVVGMAGLLDLGYAAFF 153

Query: 75  AIGAYSYVILGSRYGLSI------------WLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           AIGAY++ I GS                  +L + ++ + +   G+++GLP+L+ RGDYL
Sbjct: 154 AIGAYTWAIFGSPQANHFTAGGFPLNGNFFYLFMVLAVITTAITGLLIGLPALRLRGDYL 213

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR--FFRFPSSFVIYE 180
           AI TL + E+ + +        N   G      +          +         +   Y+
Sbjct: 214 AIVTLGLGEVVRVLANNLDHPVNLTNGPQGITPVERPPIDWFRSLMGSIGIHLDAKTDYQ 273

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +F Y ++L +  +   + + L  +    AW  IR+++ A  ++   ++  KL AFA  +A
Sbjct: 274 LFFYLLVLVVIGIVIMVNVNLGNSRFGRAWVAIREDETAAKAMGIPMLGTKLLAFATGAA 333

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           F G  G  FAA R  +SP+ F    +I ++ +V+LGGM S+  +    A L  +      
Sbjct: 334 FSGAMGVIFAAQRTFVSPESFTLLASITILGMVVLGGMGSIPGVILGAAALTILNIDILK 393

Query: 301 MNFYYFNSL--------------LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
               Y NSL              L            +  + L L+++ R   L+  R   
Sbjct: 394 SFSEYLNSLRQSGATVLGFNLANLPNQFEPAKYERLVFGVVLILMMIFRPEGLIPERRHK 453

Query: 347 NFLER 351
              E 
Sbjct: 454 LEAEE 458


>gi|119718322|ref|YP_925287.1| ABC transporter related [Nocardioides sp. JS614]
 gi|119538983|gb|ABL83600.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
           / amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Nocardioides sp. JS614]
          Length = 582

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 65/330 (19%), Positives = 123/330 (37%), Gaps = 30/330 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L   + +G    Q Y   +    LI  M A  L++ +G  GLLS       A+  Y+
Sbjct: 1   MLALWPQIAVGFGPQQSYYVDLATTALILTMLAISLNLAMGIAGLLSFVHTGLLAVAGYT 60

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             I   R+G++ WL I +  +++    +++ L S +    Y  + TL    +   ++ +W
Sbjct: 61  LGISALRWGVNPWLGILLGVVVTVLFCILISLVSARATNIYWGLITLSFDLVLIQVIEQW 120

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G  G+    R    G  + +                  YY+ L M      +   
Sbjct: 121 GSVTGGFNGLPGVPRPQLNGAPLDTQ---------------SFYYLCLVMAIGCYLVTRN 165

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L ++     +  +R + +   SL   +  A+L AFA++ A  G +GA FA   + ISP++
Sbjct: 166 LVKSPAGRGFHALRQSPETASSLGINVPAARLLAFAIAGALAGFSGALFAMHLNFISPEV 225

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
                 + +   + LGG  +L        ++  V     G                    
Sbjct: 226 ADQGPQLPLFIAIFLGGFGTLLGPVLGMVVVTAVQHELRG---------------SGENA 270

Query: 321 TTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
             ++ + L   IL+    ++     + F  
Sbjct: 271 QLILGLFLLACILILPKGIVGTWMSTRFGR 300


>gi|313126790|ref|YP_004037060.1| ABC branched-chain amino acid transporter, permease component
           [Halogeometricum borinquense DSM 11551]
 gi|312293155|gb|ADQ67615.1| ABC-type branched-chain amino acid transport system, permease
           component [Halogeometricum borinquense DSM 11551]
          Length = 364

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 74/347 (21%), Positives = 137/347 (39%), Gaps = 22/347 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R      +L  +A +  +LL   +       ++ S+     +YV+   GL++  G  GL
Sbjct: 24  VRSQSERNVLAGVAGIALVLLLATVLGVVRLPFLLSLLSLAGMYVLLTLGLNVQWGYAGL 83

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGL-----SIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           ++ +    + IGAYS  +L +                 + ++S    +++G+P+L+ R D
Sbjct: 84  INFSVAAFWGIGAYSAALLSAPTSPLGLGLHPIFGFFAAIVVSAILAVLIGIPTLRLRED 143

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLAIA+L ++E+ + I++  +  T G +GI     L               F S  +   
Sbjct: 144 YLAIASLGLAEVVRRIILNEEQWTAGSSGISGIPEL---------------FESLPLTQN 188

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
                +++G+  L    +  + R+      RTIR ++    +L       K+ AF + S 
Sbjct: 189 ATNLAIIVGLIGLVYVFLRRVHRSPWGRVLRTIRSDEDLAKALGKNTYAFKMQAFVLGSI 248

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
            + +AGAF+      I P          +   VILGG  S        A +I + E    
Sbjct: 249 IMAIAGAFYVHMNLYIDPSDLIPLTTFYIWVAVILGGTGSNRGAVLGAATVIAIREGTRF 308

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
           +N     +               + + + LV+ +R   LL  R    
Sbjct: 309 LND--VQAFTALGLDLAPLRLLFVGVLIILVVRVRPEGLLPPRDELI 353


>gi|146306417|ref|YP_001186882.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           mendocina ymp]
 gi|145574618|gb|ABP84150.1| L-leucine ABC transporter membrane protein / L-isoleucine ABC
           transporter membrane protein / L-valine ABC transporter
           membrane protein [Pseudomonas mendocina ymp]
          Length = 423

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 97/342 (28%), Positives = 167/342 (48%), Gaps = 26/342 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  +++   +    + +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 98  IILAMVMVALVWPFFASRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAY 157

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           SY IL   +GL  W+ +P++ M++   G ++G P L+ RGDYLAI TL   EI + +L  
Sbjct: 158 SYAILAHYFGLGFWICLPLAGMMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRN 217

Query: 140 WKPITNGKAGIYVAD----------RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
               T G  G+ +A+              +   + +   FF    +     IF+Y + L 
Sbjct: 218 MTEYTGGPNGLSIANENKPTLFGLSFERRVPADMPTFHGFFEIAYNSQYKVIFLYLIALL 277

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  ++  L R  I  AW  +R+++ A  +L       KLSAF + ++  G AG+FF
Sbjct: 278 LVLLTLFLVNRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTIGASLAGFAGSFF 337

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +++ + E+            
Sbjct: 338 AARQGLVTPESFTFIESAMILAIVVLGGMGSQLGVILAAIVMVMLQEM------------ 385

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                  +        + +  +++ R   LL ++ P   L+R
Sbjct: 386 ----RELSEYRMLFFGLVMIFMMIWRPQGLLPMQRPHLELKR 423


>gi|221067281|ref|ZP_03543386.1| inner-membrane translocator [Comamonas testosteroni KF-1]
 gi|220712304|gb|EED67672.1| inner-membrane translocator [Comamonas testosteroni KF-1]
          Length = 412

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 98/341 (28%), Positives = 162/341 (47%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V++ +L+        + +    +    +IYVM   GL++VVG  GLL L  V  YA+GA
Sbjct: 86  VVIFVVLMMAASWPFFAGRNAVDIATLAMIYVMLGLGLNVVVGFAGLLDLGFVGFYAVGA 145

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L    G + W  +P++   S   G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 146 YTYALLFHWAGWTFWEALPLAGAASALFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLLV 205

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
                T G  GI    +   LG  +          +  +FF    + +   I +Y + L 
Sbjct: 206 NLTSFTGGPDGISSIPKPSVLGLPMTRTPLTEDGTTFHQFFGMEFNSMHMVIALYLMALL 265

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  ++  I   L R  I  AW  +R+++ A  SL    +  KLSAF + + F G  GAFF
Sbjct: 266 LAMVTLFISNRLIRMPIGRAWEALREDEIACRSLGLNPMKIKLSAFTLGAMFAGFGGAFF 325

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  IL  + EL    + Y     
Sbjct: 326 AARQGIVNPESFTFIESALILAIVVLGGMGSQLGVIVAAIILTVLPELAREFSEY----- 380

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        +  + + L+++ R   LL ++     ++
Sbjct: 381 ----------RMLIFGLVMILMMIWRPQGLLPMKRHQVEVK 411


>gi|316935426|ref|YP_004110408.1| ABC transporter-like protein [Rhodopseudomonas palustris DX-1]
 gi|315603140|gb|ADU45675.1| ABC transporter related protein [Rhodopseudomonas palustris DX-1]
          Length = 595

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/329 (17%), Positives = 112/329 (34%), Gaps = 19/329 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++     LL  L      +  Y   +  +I+I   F   L +++G  GL+S      +
Sbjct: 7   LVVVLFFTVLLGCLLALPFVAGPYPVKLMTRIVIIATFVLSLDLLIGVTGLVSFGHAAFF 66

Query: 75  AIGAYSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             GAY+   +       ++ + +    +  G   +++G  +   RG Y  + TL   ++ 
Sbjct: 67  GCGAYAVYFVSPEAEAANVIVALGAGLVAGGVAALVIGAFATLTRGFYFIMVTLAAGQML 126

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +                              +                YYV + +   
Sbjct: 127 FALFHDTDIAKGSDGAYINVKP----------ELTLGGLMLLDFSDRRQFYYVCIVVLIA 176

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  ++L L R+      + IR N+    SL       KL+AF ++    G+AGA FA+  
Sbjct: 177 AYGLLLALVRSPFGRVLQGIRANEVRMSSLGYDTYRYKLAAFTIAGMVAGLAGALFASID 236

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             ++PD+  + ++ + I +V+LGG  +L            + EL          +     
Sbjct: 237 GFVTPDLLNWHQSGLAIMMVVLGGAGTLFGPILGALAYSSLEELL--------KTASIVG 288

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         L   +LM    L  L
Sbjct: 289 SFVADHWRLGTGATLIAAVLMSPDGLAGL 317


>gi|237814360|ref|YP_002898811.1| ABC transporter, hydrophobic amino acid uptake transporter
           [Burkholderia pseudomallei MSHR346]
 gi|237503072|gb|ACQ95390.1| ABC transporter, hydrophobic amino acid uptake transporter
           [Burkholderia pseudomallei MSHR346]
          Length = 594

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 120/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V   +L    GA +  +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   AFWLFLVALFVLPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY+   L + YG+S WL +    +++    +++G+ +++  G +L + T+       
Sbjct: 69  GVGAYATAFLTTAYGVSPWLGLIAGVVLTALVALMLGVVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +     GI     L   G    +                 +YY++  +   +
Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  + 
Sbjct: 174 IVSVRNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  S  I  + + ++GG+  +       AI+  + +    +      +   F  
Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + + L++      +  
Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313


>gi|326318081|ref|YP_004235753.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374917|gb|ADX47186.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 358

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 92/339 (27%), Positives = 156/339 (46%), Gaps = 17/339 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +    LL L L           +    L+YVM A GL+IVVG  GLL L  V  YA+GA
Sbjct: 9   IIGAIALLVLPLILQSFGNAWVRIADLALLYVMLALGLNIVVGYAGLLDLGYVAFYAVGA 68

Query: 79  YSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           Y + ++ S +                  S+WL+IP++A+++   G ++G P+LK RGDYL
Sbjct: 69  YLFGLMASPHLSDTFASFAAMFPNGLHTSLWLVIPLAALVAAIFGALLGAPTLKLRGDYL 128

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           AI TL   EI +  L       N   G     ++  +      L R        +     
Sbjct: 129 AIVTLGFGEIIRIFLNNLDHPINLTNGPKGIGQIDSVKIFGLDLGRRLELFGYDINSVTL 188

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            YY+ L +   S  I   L+ + I  AW  IR+++ A  ++       KL AF + ++F 
Sbjct: 189 YYYLFLILVVFSVIICYRLQDSRIGRAWMAIREDEIAAKAMGINTRNLKLLAFGMGASFG 248

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G++GA F A +  +SP+ F   E+++++++V+LGG+  +  +     +L  + E+   + 
Sbjct: 249 GVSGAMFGAFQGFVSPESFSLMESVMIVAMVVLGGIGHIPGVILGAVLLSALPEVLRYVA 308

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                S+        +    L+ +A+ +++LMR   L  
Sbjct: 309 GP-LQSMTDGRLDSAILRQLLIALAMIIIMLMRPRGLWP 346


>gi|319761906|ref|YP_004125843.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|317116467|gb|ADU98955.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
          Length = 358

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 86/319 (26%), Positives = 153/319 (47%), Gaps = 17/319 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---------- 88
              +    L+YVM A GL+IVVG  GLL L  V  YA+GAY + +L S +          
Sbjct: 29  WVRIADLALLYVMLALGLNIVVGYAGLLDLGYVAFYAVGAYMFGLLASPHLTENFAWFAQ 88

Query: 89  ------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
                  LS+W +IP++ +++   G+++G+P LK RGDYLAI TL   EI +  +     
Sbjct: 89  HFPDGMHLSLWAVIPLALVLAATTGVLLGIPVLKLRGDYLAIVTLGFGEIIRIFMNNLDH 148

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
             N   G     ++  +      L R        +      YY+ L +  ++  I   L+
Sbjct: 149 PVNLTNGPKGLGQIDSVKVFGLDLGRRLELFGYDINSVTLYYYLFLALVLVTIVICYRLQ 208

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            + I  AW  IR+++ A  ++       KL AF + ++F G+AGA F A +  +SP+ F 
Sbjct: 209 DSRIGRAWMAIREDEIAAKAMGINTRNMKLLAFGMGASFGGVAGAMFGAFQGFVSPESFS 268

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
             E+++++++V+LGG+  +  +     +L  + E+   +      ++       ++    
Sbjct: 269 LMESVMIVAMVVLGGLGHIPGVILGAVLLSALPEVLRYVAGP-LQAMTDGRLDASILRQL 327

Query: 323 LMVIALFLVILMRSHSLLR 341
           L+ +A+ +V+L+R   L  
Sbjct: 328 LIALAMIIVMLLRPRGLWP 346


>gi|317123525|ref|YP_004097637.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Intrasporangium calvum DSM 43043]
 gi|315587613|gb|ADU46910.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Intrasporangium calvum DSM 43043]
          Length = 352

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 82/308 (26%), Positives = 150/308 (48%), Gaps = 12/308 (3%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                KY   +   ILI V+ A GL+I+VG  G +SL      A+GA++ VI+  R G+ 
Sbjct: 39  PYVLDKYWLGIANVILISVIGAVGLNILVGFTGQISLGQGGFLAVGAFTSVIISDRAGVP 98

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + + I ++ +++ A G   GLP+L+ +G YLAIATL   EI   ++ +W+ +T G     
Sbjct: 99  VPISIAIAVLMTAAVGAFFGLPALRLKGLYLAIATLASQEIIMFVVRRWEWLTEG----- 153

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                   G      +    F     ++E+  Y++LL +  L+  +   L RT +  ++ 
Sbjct: 154 -------KGYLEVERLHVGGFQVERQMFEVQWYWILLALATLAVVVARNLFRTTLGRSFM 206

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +RD   A  ++   I  AK++AFAVSS F+G+AGA  A   + ++ + F    +++ ++
Sbjct: 207 AVRDQDIAAEAIGVNITRAKVTAFAVSSGFVGLAGALTAHYTETVTWERFTLDVSVLYLA 266

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           ++I+GG+ S++        +  +  L   +     +SL             +  IA+ + 
Sbjct: 267 MIIVGGLGSIAGAVYGAIFMGLLPALLTELVDVLGSSLPSLSDQLPALRNAVFGIAIIVF 326

Query: 332 ILMRSHSL 339
           +L+    L
Sbjct: 327 LLVEPRGL 334


>gi|145589908|ref|YP_001156505.1| inner-membrane translocator [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048314|gb|ABP34941.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 363

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 87/334 (26%), Positives = 155/334 (46%), Gaps = 17/334 (5%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
            ++       Y   +    L+YV+ A GL++VVG  GLL L  +  YA+GAYS+ +L S 
Sbjct: 27  PWVVGAAGGNYWVRVLDFALLYVVLALGLNVVVGFAGLLDLGYIAFYALGAYSFALLASP 86

Query: 88  Y----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           +                  S W++   + +++   G+I+GLP+L+ RGDYLAI TL   E
Sbjct: 87  HLPQQFEAVAAAFPEGMHFSPWMVAIFAIVLAALFGVILGLPTLQLRGDYLAIVTLGFGE 146

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +  +       N   G     ++  L     S  +        +     ++Y+ L + 
Sbjct: 147 IIRIFMNNLDRPLNLTNGPKGITKIDPLQVFGISFAKTLDLGFVKIPSLYLVFYLFLVLA 206

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
              A I + L+ + I  AW  IR+++ A  ++       KL AFA+ ++F G+AG  FAA
Sbjct: 207 TTVAFICMHLQNSRIGRAWVAIREDEIAAKAMGINTRNMKLLAFAIGASFAGVAGVLFAA 266

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  +SP+ F   E+I+V+++V+LGG+  +  +     +L    E+  G+      +L  
Sbjct: 267 FQGFVSPESFTLWESIVVLAMVVLGGIGHIPGVILGAVVLAVFPEVLRGIAEPLQKALFG 326

Query: 312 -FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                  +    +  +AL L++L R   + + + 
Sbjct: 327 HVIVDVEVIRQLIYGLALILIMLYRPGGIWQKQE 360


>gi|42527866|ref|NP_972964.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Treponema denticola ATCC 35405]
 gi|41818694|gb|AAS12883.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Treponema denticola ATCC 35405]
          Length = 339

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 76/325 (23%), Positives = 138/325 (42%), Gaps = 29/325 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +  ++   +L +         Y   + I   IY +    L++V G +G   L     + +
Sbjct: 20  IFVLIILAVLAISFPIFVDNNYYLGIAIMFFIYSILTLSLNLVTGYVGFTLLGQAAFFGL 79

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY   ILG+R+ +   +    +++ +G  G ++ LP+L+ RG Y AI TL  SEI + I
Sbjct: 80  GAYVAAILGTRFQVDFIIGCIAASLFAGIFGAMLALPTLRIRGRYFAIVTLGFSEIMRMI 139

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            + W  +T G  GI     +   G    S                F YYV L +   +  
Sbjct: 140 ELNWMEMTRGPQGISRIPGIVIFGKEFDSYR--------------FKYYVGLVLLIFALY 185

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           II  +  +    A R I+D+  A  ++   +    +  F++S+   GMAGA++A     I
Sbjct: 186 IINSILNSKHGRAVRAIKDDDLAAGAIGVNVYKYTVIIFSISAGIAGMAGAYYAHYMSFI 245

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
            P+ F F ++I+++S+ I GG+ SL         L  + E    ++ Y            
Sbjct: 246 DPNAFNFEQSILILSMAIFGGLGSLPGSILGALALTILPEALRFLSDY------------ 293

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 +  + L L+++ +   ++ 
Sbjct: 294 ---RQIIYGLILVLIVIFKPSGVMG 315


>gi|157363936|ref|YP_001470703.1| inner-membrane translocator [Thermotoga lettingae TMO]
 gi|157314540|gb|ABV33639.1| inner-membrane translocator [Thermotoga lettingae TMO]
          Length = 561

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 68/308 (22%), Positives = 126/308 (40%), Gaps = 36/308 (11%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
            KS  +I ++    +IY M   GL++++G  G +S+      +IGAY+  IL  +  + +
Sbjct: 17  FKSSTFILTIMNLTMIYTMAGMGLNLIMGYTGQVSIGHAAFMSIGAYTSAILTQKLSIPL 76

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            L +  +  I G  G+ +G P+L+  G YLAIAT+      + +    +  T G  GI  
Sbjct: 77  PLSLICATAIGGIFGLALGFPALRLAGFYLAIATMGFGIAIEQLFGALENFTGGHIGIRN 136

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                                 + +  E+  YY++L +  ++      L       A + 
Sbjct: 137 I---------------------TKLGSELESYYIILILIIVAFYFFNKLVNGKTGRALKA 175

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           IR+N+     L   +   K+ +F + SA+ G+AGA +A     ISP  F   +++ ++++
Sbjct: 176 IRENELVANVLGVNLTHYKVLSFVIGSAYAGLAGALYAHVIGYISPADFGLGKSLELLAV 235

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           V++GGM  +S           +      + F                   +    L LV+
Sbjct: 236 VVIGGMGMVSGPIFGAVFYTVLPFFLSRVGFSLS---------------IIFGSVLVLVV 280

Query: 333 LMRSHSLL 340
           L     + 
Sbjct: 281 LFMPRGIA 288


>gi|289772267|ref|ZP_06531645.1| branched chain amino acid transport permease [Streptomyces lividans
           TK24]
 gi|289702466|gb|EFD69895.1| branched chain amino acid transport permease [Streptomyces lividans
           TK24]
          Length = 611

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 78/347 (22%), Positives = 135/347 (38%), Gaps = 28/347 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V    +       T+S     ++G+ ILI+   A GL+IVVG  GLL L  V    +G
Sbjct: 267 ITVCGGFIAAACFPFTQSDDQYATLGVYILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 326

Query: 78  AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           AY+  ++           L  W  + V A  S   G+++G P+L+ RGDYLAI TL   E
Sbjct: 327 AYAASMVSGSPSSPFDLHLPFWAAVLVGAAASLVFGVLIGAPTLRLRGDYLAIVTLGFGE 386

Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           IF+         +      G      +  L      L          +      + ++L 
Sbjct: 387 IFRITANNLDGTSGPDVTNGSNGISSIPDLKILGFDLGVSHDMGGFTLGRFANYFLLMLI 446

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  +   +      + I  AW  IR+++ A  ++       KL AFAV ++  G+AG   
Sbjct: 447 ITAVVVLVFRRSGDSRIGRAWVAIREDETAALAMGINGFRVKLIAFAVGASLAGLAGTVQ 506

Query: 250 AASRDRISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A     ++P+ +         +  +++ V+LGGM +++      A+L  +      ++ Y
Sbjct: 507 AHVTYTVTPEQYLFAGTTPPNSAFLLAAVVLGGMGTIAGPLIGAALLFLIPNKLQFLDDY 566

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                                +AL L++  R   L+  R        
Sbjct: 567 ---------------QLLAFGLALVLLMRFRPEGLIANRRRKLEFHE 598


>gi|256788375|ref|ZP_05526806.1| branched chain amino acid transport permease [Streptomyces lividans
           TK24]
          Length = 608

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 78/347 (22%), Positives = 135/347 (38%), Gaps = 28/347 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V    +       T+S     ++G+ ILI+   A GL+IVVG  GLL L  V    +G
Sbjct: 264 ITVCGGFIAAACFPFTQSDDQYATLGVYILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 323

Query: 78  AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           AY+  ++           L  W  + V A  S   G+++G P+L+ RGDYLAI TL   E
Sbjct: 324 AYAASMVSGSPSSPFDLHLPFWAAVLVGAAASLVFGVLIGAPTLRLRGDYLAIVTLGFGE 383

Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           IF+         +      G      +  L      L          +      + ++L 
Sbjct: 384 IFRITANNLDGTSGPDVTNGSNGISSIPDLKILGFDLGVSHDMGGFTLGRFANYFLLMLI 443

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  +   +      + I  AW  IR+++ A  ++       KL AFAV ++  G+AG   
Sbjct: 444 ITAVVVLVFRRSGDSRIGRAWVAIREDETAALAMGINGFRVKLIAFAVGASLAGLAGTVQ 503

Query: 250 AASRDRISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A     ++P+ +         +  +++ V+LGGM +++      A+L  +      ++ Y
Sbjct: 504 AHVTYTVTPEQYLFAGTTPPNSAFLLAAVVLGGMGTIAGPLIGAALLFLIPNKLQFLDDY 563

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                                +AL L++  R   L+  R        
Sbjct: 564 ---------------QLLAFGLALVLLMRFRPEGLIANRRRKLEFHE 595


>gi|119898793|ref|YP_934006.1| branched-chain amino acid ABC transporter [Azoarcus sp. BH72]
 gi|119671206|emb|CAL95119.1| probable branched-chain amino acid ABC transporter [Azoarcus sp.
           BH72]
          Length = 597

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 48/332 (14%), Positives = 109/332 (32%), Gaps = 31/332 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+   L  L +       +  ++   I +Y M A GL ++ G  GL S        +GA
Sbjct: 6   LVLGVFLALLAVAPLVLPPFYVTLLNYIGLYAMVALGLVLLTGVGGLTSFGQAAFVGLGA 65

Query: 79  YSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
           Y+  +           +  G S WL + V    +    +++G  +LK  G YL + T+  
Sbjct: 66  YTTALLCTATELPAWLAWAGGSPWLALVVGLAFTAVVAVVLGSLTLKLSGHYLPLGTIAW 125

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 +    + +  G  G+     +   G  +                   +YY++  
Sbjct: 126 GISLYFLFGTMESL-GGHTGLTGIPPISIFGWVLDQGEE--------------IYYLIWV 170

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
               +      L  +    A R ++       ++      +++  F +++     +G  +
Sbjct: 171 FLLAAVFTTQNLLDSREGRAIRALKGGMVMAEAMGVDTSRSRMIIFVIAALHACASGWLY 230

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A  +  ++P  F     I  + + ++GG   +        ++  + +    +    F   
Sbjct: 231 AHMQRFVNPTPFGLHIGIEYLFMAVVGGAGHVWGALVGAGVITVLKQWLQDLLPRLFGQS 290

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             F          +  + + +V+      L  
Sbjct: 291 GNF-------EVIVFGLMMVIVLQRARDGLWP 315


>gi|21220492|ref|NP_626271.1| branched chain amino acid transport permease [Streptomyces
           coelicolor A3(2)]
 gi|5689903|emb|CAB52066.1| putative branched chain amino acid transport permease [Streptomyces
           coelicolor A3(2)]
          Length = 608

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 78/347 (22%), Positives = 135/347 (38%), Gaps = 28/347 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V    +       T+S     ++G+ ILI+   A GL+IVVG  GLL L  V    +G
Sbjct: 264 ITVCGGFIAAACFPFTQSDDQYATLGVYILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 323

Query: 78  AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           AY+  ++           L  W  + V A  S   G+++G P+L+ RGDYLAI TL   E
Sbjct: 324 AYAASMVSGSPSSPFDLHLPFWAAVLVGAAASLVFGVLIGAPTLRLRGDYLAIVTLGFGE 383

Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           IF+         +      G      +  L      L          +      + ++L 
Sbjct: 384 IFRITANNLDGTSGPDVTNGSNGISSIPDLKILGFDLGVSHDMGGFTLGRFANYFLLMLI 443

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  +   +      + I  AW  IR+++ A  ++       KL AFAV ++  G+AG   
Sbjct: 444 ITAVVVLVFRRSGDSRIGRAWVAIREDETAALAMGINGFRVKLIAFAVGASLAGLAGTVQ 503

Query: 250 AASRDRISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A     ++P+ +         +  +++ V+LGGM +++      A+L  +      ++ Y
Sbjct: 504 AHVTYTVTPEQYLFAGTTPPNSAFLLAAVVLGGMGTIAGPLIGAALLFLIPNKLQFLDDY 563

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                                +AL L++  R   L+  R        
Sbjct: 564 ---------------QLLAFGLALVLLMRFRPEGLIANRRRKLEFHE 595


>gi|27382944|ref|NP_774473.1| ABC transporter ATP-binding/permease protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27356117|dbj|BAC53098.1| ABC transporter ATP-binding/permease protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 589

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 65/323 (20%), Positives = 122/323 (37%), Gaps = 22/323 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V+ L++           +   +   I +  + A GL ++ G  GL S         GA
Sbjct: 7   ILVFALVMAAIPFVPGMPPFWIVLLDNIGLAALVAMGLVLLTGVGGLTSFGQAAFVGFGA 66

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L + YGLS WL +P+S ++SG+  +++GL +++  G YL + TL        +  
Sbjct: 67  YTTAVLSTSYGLSPWLTLPLSLVVSGSLAVLLGLVTVRLSGHYLPLGTLAWGLGLFYLFS 126

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           K + +     GI     L      + S                 +YY +     LSA + 
Sbjct: 127 KLEFL-GRNDGISAIPPLSIGAFKMLS--------------PGSIYYAIWVAVILSALLT 171

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L  +    A R +R    A  +       AKL  F  ++   G++G  +A  +  ++P
Sbjct: 172 MNLLDSRTGRAIRALRRGHVAAEAFGVHTPRAKLLVFIHAAVLAGLSGWLYAHLQRAVNP 231

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F     I  + I ++GG   +       AI++ + E+                     
Sbjct: 232 TPFGAQAGIEYLFIAVVGGAGYVWGGVLGAAIVVVLKEVLQSYLPLLLPG-------SGQ 284

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
             T +  I L  ++ +    +  
Sbjct: 285 VETIVFGIMLVALLQLAPGGVWP 307


>gi|217423937|ref|ZP_03455437.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei 576]
 gi|217393000|gb|EEC33022.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei 576]
          Length = 594

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 120/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V   +L    GA +  +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   AFWLFLVALFVLPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY+   L + YG+S WL +    +++    +++G+ +++  G +L + T+       
Sbjct: 69  GVGAYATAFLTTAYGVSPWLGLIAGVVLTALVALVLGVVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +     GI     L   G    +                 +YY++  +   +
Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  + 
Sbjct: 174 IVSVRNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  S  I  + + ++GG+  +       AI+  + +    +      +   F  
Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + + L++      +  
Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313


>gi|256830267|ref|YP_003158995.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
 gi|256579443|gb|ACU90579.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
          Length = 407

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 94/325 (28%), Positives = 154/325 (47%), Gaps = 26/325 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
              L+   +       Y  ++ I  L+YV+   GL+I+VG  GLL L     YAIGAYSY
Sbjct: 93  ALFLVIFLVTPWLVTTYQTNILISFLLYVVLGLGLNIIVGVAGLLFLGHAAFYAIGAYSY 152

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +L   +GL  W+ +P+  +I+   G+ +  P L+ RGDYLAI TL   EI + +L  W 
Sbjct: 153 ALLNQYFGLGFWVALPLGGVIAALAGIALAFPVLRLRGDYLAIVTLGFGEIVRLVLENWS 212

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G +GI    R                   S     I++YY++L +  ++   +  L
Sbjct: 213 DLTGGPSGISNIPRPGLFDA-----------TLSVADANIYIYYIVLALAIITIIAVTRL 261

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
           + + I  A + +R+++ A  ++    +  K+ AF + +A+ G AG  FAA    I+P  F
Sbjct: 262 KDSRIGRALQALREDEIACEAMGIDRVGVKVMAFGLGTAWAGFAGVIFAAKTTFINPASF 321

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F E+ I++SIV+LGGM S   +   +A L+ + E     + Y                 
Sbjct: 322 TFFESAIILSIVVLGGMGSNLGVILGSAFLVLLPEYLRAFSEY---------------RM 366

Query: 322 TLMVIALFLVILMRSHSLLRLRTPS 346
            L   A+ L+++ R   L+  +  S
Sbjct: 367 ILFATAMVLMMVFRPQGLIPAKGRS 391


>gi|167904866|ref|ZP_02492071.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei NCTC 13177]
          Length = 594

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 120/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V   +L    GA +  +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   AFWLFLVALFVLPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY+   L + YG+S WL +    +++    +++G+ +++  G +L + T+       
Sbjct: 69  GVGAYATAFLTTAYGVSPWLGLIAGVVLTALVALMLGVVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +     GI     L   G    +                 +YY++  +   +
Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  + 
Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  S  I  + + ++GG+  +       AI+  + +    +      +   F  
Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + + L++      +  
Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313


>gi|167847907|ref|ZP_02473415.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei B7210]
 gi|254298689|ref|ZP_04966140.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei 406e]
 gi|157808494|gb|EDO85664.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei 406e]
          Length = 594

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 120/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V   +L    GA +  +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   AFWLFLVALFVLPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY+   L + YG+S WL +    +++    +++G+ +++  G +L + T+       
Sbjct: 69  GVGAYATAFLTTAYGVSPWLGLIAGVVLTALVALVLGVVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +     GI     L   G    +                 +YY++  +   +
Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  + 
Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  S  I  + + ++GG+  +       AI+  + +    +      +   F  
Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + + L++      +  
Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313


>gi|126439203|ref|YP_001060977.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein
           [Burkholderia pseudomallei 668]
 gi|126218696|gb|ABN82202.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei 668]
          Length = 594

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 119/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V    L    GA +  +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   AFWLFLVALFALPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY+   L + YG+S WL +    +++    +++G+ +++  G +L + T+       
Sbjct: 69  GVGAYATAFLTTAYGVSPWLGLIAGVVLTALVALMLGIVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +     GI     L   G    +                 +YY++  +   +
Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  + 
Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  S  I  + + ++GG+  +       AI+  + +    +      +   F  
Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + + L++      +  
Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313


>gi|317486436|ref|ZP_07945263.1| branched-chain amino acid transport system/permease component
           [Bilophila wadsworthia 3_1_6]
 gi|316922346|gb|EFV43605.1| branched-chain amino acid transport system/permease component
           [Bilophila wadsworthia 3_1_6]
          Length = 414

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 92/324 (28%), Positives = 156/324 (48%), Gaps = 26/324 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            + + + +    S  Y  ++ I  LIY+M   GL+IVVG  G L L     YA+GAY+Y 
Sbjct: 92  LIAVLMLVMPYISSMYQINIMISALIYIMLGLGLNIVVGLAGQLVLGYAAFYAVGAYTYG 151

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +L + +GL  W ++PV  +++   G+++G P L+ +GDYLAI TL   EI + +L  W  
Sbjct: 152 LLNTYFGLGFWAVLPVGGIMAALFGLMLGFPVLRLKGDYLAIVTLGFGEIIRLVLENWTS 211

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+    R              F           ++YY++L    ++  ++  L+
Sbjct: 212 VTKGSFGLSNLSRPS-----------LFGMEMGVTEATNYIYYIVLAAVVVTIIVVGRLK 260

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            + I  A + +R+++ A  ++   +   KLSAFA+ S + G AG  FAA    I+P  F 
Sbjct: 261 NSRIGLALQALREDEIACEAMGIDLTKVKLSAFALGSCWAGFAGVIFAAKTTFINPASFT 320

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F E+ +V+S+V+LGGM S+  +  A AIL+   E     + Y                  
Sbjct: 321 FMESAMVLSMVVLGGMGSVLGVTIAAAILVLAPEYLRAFSEY---------------RML 365

Query: 323 LMVIALFLVILMRSHSLLRLRTPS 346
           L    + ++++ R   L+     +
Sbjct: 366 LFGAVMVIMMIYRPQGLISGEKRT 389


>gi|315122686|ref|YP_004063175.1| ABC transporter membrane spanning protein (branched chain amino
           acid) [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313496088|gb|ADR52687.1| ABC transporter membrane spanning protein (branched chain amino
           acid) [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 353

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 235/349 (67%), Positives = 286/349 (81%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M  F  R+ KYDK L  LA +YPL+LF      K+QKYIDS+GIQ LIYVM AWGLS++ 
Sbjct: 1   MLAFLPRMKKYDKFLFCLATIYPLVLFFLFNTNKAQKYIDSIGIQALIYVMLAWGLSVIA 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           GS GL SLN V+AYA+GAY+YVILG+ YG S WLL+P+SA++SGACG+++GLPSLKFRGD
Sbjct: 61  GSAGLFSLNYVVAYAVGAYTYVILGNNYGFSPWLLLPMSAILSGACGLVLGLPSLKFRGD 120

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLAIAT I+SEIF NILI+WKP+TNGKAG+Y+ADRL +LG  +R ++RFFR+PSS V Y+
Sbjct: 121 YLAIATFIISEIFHNILIRWKPLTNGKAGLYIADRLMYLGADLRGILRFFRYPSSIVFYK 180

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           IFMYYV+L +CFLSA IIL LRRT++ NAWRTI+DNQ+AF S NTTIIF+KLSAF+    
Sbjct: 181 IFMYYVVLFLCFLSAWIILRLRRTSMGNAWRTIKDNQRAFSSFNTTIIFSKLSAFSFGCM 240

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           F G+AG   AASR  +SPDMFK SENI +ISIVILGGMTSLS IA    I+I  +EL CG
Sbjct: 241 FAGVAGGLLAASRGYVSPDMFKMSENIALISIVILGGMTSLSHIAWVALIMISGMELLCG 300

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
           +NFYYFNS LKFDCSFNMRH+ LM+++LF VIL+RS+SL++LR PS FL
Sbjct: 301 VNFYYFNSFLKFDCSFNMRHSVLMIVSLFFVILLRSYSLIKLRYPSPFL 349


>gi|326796763|ref|YP_004314583.1| ABC-type transporter integral membrane subunit [Marinomonas
           mediterranea MMB-1]
 gi|326547527|gb|ADZ92747.1| ABC-type transporter, integral membrane subunit [Marinomonas
           mediterranea MMB-1]
          Length = 426

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 99/330 (30%), Positives = 157/330 (47%), Gaps = 22/330 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++   ++  FL    + KYI ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 99  IIPLTIVIAFLVPFIASKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGFVGFYAIGAY 158

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+++   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 159 GLALGYEHLGLGFWSMLPIAAIVAAIFGAILGFPVLRMHGDYLAIVTLGFGEIIRLVLTN 218

Query: 140 WKPITNGKAGIYVADRLYFLGTT-------VRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W  +T+G  G+      +F                 FF    S     IF+Y +LL +  
Sbjct: 219 WTELTHGPNGMNAPLPTFFGMEFKRRASEGHVPFHEFFGLSYSSAYKYIFIYLILLLVVL 278

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               +   L +  I  AW  +R+++ A  SL    +  KLSAF + ++  G+AG FFA  
Sbjct: 279 GVLYVKKRLTQMPIGRAWEALREDEIACRSLGLNHVLVKLSAFMIGASTGGLAGVFFATY 338

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    E+      Y        
Sbjct: 339 QGFVNPSSFTFFESALILAIVVLGGMGSTLGVVIAAFVLTVAPEMLREFADY-------- 390

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                        I + L+++ +   L+R+
Sbjct: 391 -------RVLAFGILMVLMMIWKPRGLVRM 413


>gi|300311115|ref|YP_003775207.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum
           seropedicae SmR1]
 gi|300073900|gb|ADJ63299.1| ABC-type branched-chain amino acid transport system, ATPase
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 655

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 70/289 (24%), Positives = 135/289 (46%), Gaps = 16/289 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            LL  +  ++    +       Y   +   ILIY +  +GL IVVG  G +SL     + 
Sbjct: 5   ILLLSLLGIVALAGIPMVVHNPYYLHLIETILIYAILLFGLDIVVGYTGQVSLGHAGLFG 64

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IG+Y+  +L  + G+ I++ +P +  ++   G I+ LP+L+  G YLA+ TL    I Q 
Sbjct: 65  IGSYAAGVLFFKLGMPIFVTVPAAIAVTAVFGAILALPALRVTGPYLAMVTLAFGTIIQI 124

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           ++ +   +T G  GI +                         + E+  +Y++  +  LS 
Sbjct: 125 LINEMTFLTEGPLGIKLQKP----------------MIGGDKMSEVQFFYLVAVLMVLSM 168

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++  + ++ +  A++ +RD+  A   +  ++   K+ AF +S+A  G++GA +A S + 
Sbjct: 169 LVVHRILKSNLGRAFQALRDSPIASDCMGVSVYRYKVYAFIISAALAGLSGALYAYSEEY 228

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           ISP+ + F   I+ +  VI+GG  S         I++ +  L   +  +
Sbjct: 229 ISPNTYNFELTIMFLLAVIMGGRKSRIGSLIGALIVVMLPSLLSDIALF 277


>gi|296161988|ref|ZP_06844787.1| ABC transporter related protein [Burkholderia sp. Ch1-1]
 gi|295887732|gb|EFG67551.1| ABC transporter related protein [Burkholderia sp. Ch1-1]
          Length = 646

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 65/295 (22%), Positives = 134/295 (45%), Gaps = 16/295 (5%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                    Y   +   I+IY +  +GL IVVG  G +SL     + +GAY+  +L  + 
Sbjct: 18  VFPVLSGNPYYIHLLETIMIYAILLFGLDIVVGYTGQVSLGHAGLFGVGAYTAGVLFFKL 77

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           G+  ++  P++ +++   G I+ LP+L+  G YLA+ TL    I Q ++ +   +TNG  
Sbjct: 78  GMPFFVTAPLAILVTAGFGAILALPALRVSGPYLAMVTLAFGTIIQILINEMDFLTNGPM 137

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G+ +    +                      E+  Y+++  +   S  ++  + R+ +  
Sbjct: 138 GVKIPKPSFGGRPM----------------NEVEYYWLVAALLVASLIVVHRVLRSHLGR 181

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           A+  +RD+  A   +  ++   K+ AF +S+ F G+AG  ++ S   ISP+ + F   I+
Sbjct: 182 AFEALRDSPIASDCMGVSVYRYKVYAFVISAGFAGLAGCLYSYSEQYISPNTYNFELTIL 241

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            +  +I+GG  + +     +AI++ + +L   ++ +   + +            L
Sbjct: 242 FLLAIIMGGRKTRTGALLGSAIIVLLPKLLDDIDMFRTVASVLAAVVVIGAGVAL 296


>gi|330000403|ref|ZP_08303717.1| branched-chain amino acid ABC transporter, permease protein
           [Klebsiella sp. MS 92-3]
 gi|328538015|gb|EGF64188.1| branched-chain amino acid ABC transporter, permease protein
           [Klebsiella sp. MS 92-3]
          Length = 428

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 100/339 (29%), Positives = 161/339 (47%), Gaps = 22/339 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L+    +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 101 IIPLLVGLAIVFPFLATKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 160

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P+ A+++   G ++G P L+  GDYLAI TL   EI + +L  
Sbjct: 161 GLALGYQYLGLGFWAMLPLGAVMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 220

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V     F     R        +  FF    +  +  IF+Y VL  +  
Sbjct: 221 WVSFTGGPNGVPVPSPTLFGLEFTRRAKDGGIPIHEFFHVSYNPNLKFIFLYAVLCLVVM 280

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   +   L R  I  AW  +R+++ A  ++    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 281 LVLLVKHRLTRMPIGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGIAGVFFASY 340

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL  G + Y        
Sbjct: 341 QGFVNPTSFTFFESALILAIVVLGGMGSTLGVVLAAFVLTVTPELLRGFDEY-------- 392

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                     L  + + ++++ R   L+R       L +
Sbjct: 393 -------RVLLFGVLMVMMMIWRPRGLVRTSRSGVALRK 424


>gi|76811743|ref|YP_331608.1| branched-chain amino acid ABC transporter permease/ATP-binding
           protein [Burkholderia pseudomallei 1710b]
 gi|126453842|ref|YP_001068277.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein
           [Burkholderia pseudomallei 1106a]
 gi|167913144|ref|ZP_02500235.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei 112]
 gi|242314336|ref|ZP_04813352.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei 1106b]
 gi|254194717|ref|ZP_04901148.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei S13]
 gi|254260661|ref|ZP_04951715.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei 1710a]
 gi|76581196|gb|ABA50671.1| branched-chain amino acid ABC tranpsorter, permease/ATP-binding
           protein [Burkholderia pseudomallei 1710b]
 gi|126227484|gb|ABN91024.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei 1106a]
 gi|169651467|gb|EDS84160.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei S13]
 gi|242137575|gb|EES23977.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei 1106b]
 gi|254219350|gb|EET08734.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei 1710a]
          Length = 594

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 119/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V    L    GA +  +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   AFWLFLVALFALPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY+   L + YG+S WL +    +++    +++G+ +++  G +L + T+       
Sbjct: 69  GVGAYATAFLTTAYGVSPWLGLIAGVVLTALVALMLGVVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +     GI     L   G    +                 +YY++  +   +
Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  + 
Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  S  I  + + ++GG+  +       AI+  + +    +      +   F  
Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + + L++      +  
Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313


>gi|224367400|ref|YP_002601563.1| LivM1 [Desulfobacterium autotrophicum HRM2]
 gi|223690116|gb|ACN13399.1| LivM1 [Desulfobacterium autotrophicum HRM2]
          Length = 401

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 94/321 (29%), Positives = 156/321 (48%), Gaps = 26/321 (8%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            +  L +F+ +       Y  S+ I  LIYVM   GL+IVVG  GLL L  V  +A+GAY
Sbjct: 92  ALVALGVFILVFPHLFSMYQTSIMISALIYVMLGLGLNIVVGLAGLLDLGYVAFFAVGAY 151

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           SY +L   YG++ W+ +P+  +++G  G+++G P L+ RGDYLAI TL   EI + +L  
Sbjct: 152 SYALLNLTYGITFWVALPLGGLLAGCFGILLGYPVLRLRGDYLAIVTLGFGEIIRLVLEN 211

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W   ++G +GI    +              F    +     I+++Y+L+ +   +  +I 
Sbjct: 212 WNEFSHGPSGIANIPKPS-----------LFGLDLTLDQKTIYLFYILVLLVLFTIFVIN 260

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L+ + I  AW  ++D++ A  ++       KL AFA+ + + GM G  FAA    I+P 
Sbjct: 261 RLQDSRIGRAWVALKDDEIACQAMGIDKAKTKLRAFALGATWAGMGGVIFAAKTTFINPA 320

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F   E++I++  V+LGGM S+  +     +LI + E                   F   
Sbjct: 321 SFTIWESVIILCTVVLGGMGSILGVISGALLLILLPEYLR---------------DFGQF 365

Query: 320 HTTLMVIALFLVILMRSHSLL 340
                 I L L+++ R   ++
Sbjct: 366 RMITFGIVLVLMMVFRPGGMI 386


>gi|146338074|ref|YP_001203122.1| putative branched-chain amino acid ABC transporter
           permease/ATP-binding protein [Bradyrhizobium sp. ORS278]
 gi|146190880|emb|CAL74885.1| ABC tranpsorter, permease protein (N-ter) and ATP-binding protein
           (C-ter); putative branched-chain amino acid transport
           protein [Bradyrhizobium sp. ORS278]
          Length = 589

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/323 (17%), Positives = 120/323 (37%), Gaps = 22/323 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +++ +L+           +   +   I +  + A GL ++ G  GL S         GA
Sbjct: 7   LIIFAVLVAAIPFIPGMPPFWIVLLDNIGLSALVAMGLVLLTGVGGLTSFGQAAFVGFGA 66

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L ++YG+S WL +P+S ++SG   +++GL +++  G YL + TL        +  
Sbjct: 67  YTTAVLSAQYGVSPWLTLPLSLLVSGVAAVLLGLVTVRLSGHYLPLGTLAWGLGLYYLFS 126

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           K   +     G+     L      +                   +Y+ +     ++A + 
Sbjct: 127 KLAFL-GRNDGVSGIPPLSIGSLKMLD--------------PGTIYFAIWAAVLIAALLT 171

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L  +    A R +R    A  +       AKL  F  ++   G++G  +A     ++P
Sbjct: 172 MNLLDSRTGRAIRALRRGHIAAEAFGVYSPRAKLLVFIYAAVLAGLSGWLYAHFTRAVNP 231

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F     I  + + ++GG   +       AI++ + E+         +           
Sbjct: 232 TPFGAQAGIEYLFVAVVGGAGYVWGGVLGAAIVVILKEVLQSYLPLLLHGE-------GQ 284

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
             T +  I L  ++ +    L  
Sbjct: 285 LETIVFGILLVTLLQLAPTGLWP 307


>gi|15807924|ref|NP_285584.1| branched-chain amino acid ABC transporter ATP binding protein
           [Deinococcus radiodurans R1]
 gi|6460675|gb|AAF12380.1|AE001863_5 branched-chain amino acid ABC tranpsorter, ATP binding protein
           [Deinococcus radiodurans R1]
          Length = 587

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/327 (16%), Positives = 113/327 (34%), Gaps = 22/327 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +     +   +       +  ++   I I  +   GL ++ G  GL S        +GA
Sbjct: 7   LLAIIAAVLALVLPLVLPVFQVTLLTNIAIVSITVIGLVLLTGISGLTSFGQAAFMGVGA 66

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L ++YG S WL +P   +++ A   I+GL +L+ +G YL +AT+        +  
Sbjct: 67  YTTALLTTKYGWSPWLTLPAGMLLTAAVANILGLITLRMQGHYLPLATIAWGISLYYVFG 126

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +  G  GI     + F G  +     F     +F+   I                 
Sbjct: 127 NTPAL-GGFTGIREIPPVSFFGRVLDQPREFAYLALAFLALTI--------------VAA 171

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
            +L  +    A R +R       +        ++  F +S+    +AG  +A  +  ++P
Sbjct: 172 QFLLSSRFGRALRALRTGPVVAEAFGANTFALRVQVFVLSAVMASVAGWLYAHQQRFVNP 231

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F  +  I  + + ++GG   +        ++  + E+   +                 
Sbjct: 232 TPFGLNVGIEYLFMAVIGGSGYVWGGVAGAVLITLLREVLQDVLPRLLGE-------NTN 284

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345
               ++ I + L +      L  L   
Sbjct: 285 YEIVVLGILIILTLQFARRGLWPLIER 311


>gi|328953529|ref|YP_004370863.1| ABC-type transporter, integral membrane subunit [Desulfobacca
           acetoxidans DSM 11109]
 gi|328453853|gb|AEB09682.1| ABC-type transporter, integral membrane subunit [Desulfobacca
           acetoxidans DSM 11109]
          Length = 294

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 67/304 (22%), Positives = 127/304 (41%), Gaps = 30/304 (9%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y   + I   +Y++ A  L++++G  G +SL     Y +GAYS  ++   +     L + 
Sbjct: 4   YFLHLAIISCLYIILALSLNLIIGYCGQVSLGHAAFYGLGAYSSALVAIHWHFPFLLALL 63

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            + +++   G+ +G+P+L+ + DYLAI TL    I   +L+    IT G  GI       
Sbjct: 64  TAMIVAALFGLSLGIPTLRLKDDYLAIVTLGFGVIIDLVLLNL-DITGGPDGITRIPAPT 122

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                 R               + +   +++    L+   I  L  +    A + IRD++
Sbjct: 123 MFDLNFR--------------LKGWYLMLVVLAVALTLLFIHRLVNSRHGRALKAIRDHE 168

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                +       K++ FA+S+   G+AG+ +A     I+P+ F    +I+++++V+LGG
Sbjct: 169 ITANVMGINTAAYKIAIFALSAGLAGLAGSLYAHYITFINPESFGLHTSILILTMVVLGG 228

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           M S+        IL  + E+      Y                       L ++++ R  
Sbjct: 229 MGSILGSVLGACILTALPEMLRRFADY---------------QDLAYGGLLIVMLIWRPQ 273

Query: 338 SLLR 341
            LL 
Sbjct: 274 GLLG 277


>gi|84496563|ref|ZP_00995417.1| putative branched chain amino acid transport permease [Janibacter
           sp. HTCC2649]
 gi|84383331|gb|EAP99212.1| putative branched chain amino acid transport permease [Janibacter
           sp. HTCC2649]
          Length = 581

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 79/343 (23%), Positives = 133/343 (38%), Gaps = 23/343 (6%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L +    + FLF           S+  Q+LI+   A GL+IVVG  GLL L  +     
Sbjct: 233 VLMLGAFAVAFLFPFTQGGSDENMSIATQVLIFAATALGLNIVVGLAGLLDLGYIAFLGA 292

Query: 77  GAY------SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           GAY      +       +     +++ V A  S   G+I+G P+L+  GDYLAI TL   
Sbjct: 293 GAYVGATLSTSAFATIGWKPPFIIVVLVGACFSALLGLIIGSPTLRVSGDYLAIVTLAFG 352

Query: 131 EIFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           EIF+  +             G      +  L        +        +      Y++LL
Sbjct: 353 EIFRFTMGNLDGNNGPDLTNGPNGIPAIPDLAIGSFDFGQPHTIAGITLGRFANYYFLLL 412

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +      +   L  + I   W  IR+++KA  ++   +   KL AFA  +   GMAG  
Sbjct: 413 VIAAFIILVFTRLNNSRIGRGWVAIREDEKAAEAMGVNVFGLKLFAFAGGAFLAGMAGTV 472

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            A     ++PD + F E+  +++ ++LGGM +++ +     IL  + E       Y    
Sbjct: 473 KAHHDVSVTPDQYVFLESAFLLAAIVLGGMGTVAGVLVGATILKLLPEKLRDAADY---- 528

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                         +  + L L++  R   L+  +        
Sbjct: 529 -----------RLMIFGLVLVLMMRFRPEGLIASQRRKLEFHE 560


>gi|187922914|ref|YP_001894556.1| branched-chain amino acid ABC transporter ATPase/inner membrane
           protein [Burkholderia phytofirmans PsJN]
 gi|187714108|gb|ACD15332.1| ABC transporter related [Burkholderia phytofirmans PsJN]
          Length = 646

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 67/294 (22%), Positives = 133/294 (45%), Gaps = 16/294 (5%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
                   Y   +   I+IY +  +GL IVVG  G +SL     + +GAY+  +L  + G
Sbjct: 19  FPVLSGNPYYIHLLETIMIYAILLFGLDIVVGYTGQVSLGHAGLFGVGAYTAGVLFFKLG 78

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +   +  P++ +I+ A G I+ LP+L+  G YLA+ TL    I Q ++ +   +TNG  G
Sbjct: 79  MPFIVTAPLAILITAAFGAILALPALRVSGPYLAMVTLAFGTILQILINEMDFLTNGPMG 138

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           + +                           E+  Y+++  +   S  ++  + R+ +  A
Sbjct: 139 VKIPKPSLAGRPM----------------NEVEYYWLVAALLVASLIVVHRVLRSHLGRA 182

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
           +  +RD+  A   +  ++   K+ AF +S+ F G+AG  ++ S   ISP+ + F   I+ 
Sbjct: 183 FEALRDSPIASDCMGVSVYRYKVYAFVISAGFAGLAGCLYSYSEQYISPNTYNFELTILF 242

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  +I+GG  + +     +AI++ + +L   ++ +   + +            L
Sbjct: 243 LLAIIMGGRKTRTGALLGSAIIVLLPKLLDDIDMFRTVASVLAAVVVIGAGVAL 296


>gi|53721017|ref|YP_110003.1| putative branched-chain amino acid ABC transporter [Burkholderia
           pseudomallei K96243]
 gi|167818025|ref|ZP_02449705.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei 91]
 gi|167826388|ref|ZP_02457859.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei 9]
 gi|226193322|ref|ZP_03788932.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|254186503|ref|ZP_04893020.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|52211431|emb|CAH37422.1| putative branched-chain amino acid ABC transporter [Burkholderia
           pseudomallei K96243]
 gi|157934188|gb|EDO89858.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|225934922|gb|EEH30899.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei Pakistan 9]
          Length = 594

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 119/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V    L    GA +  +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   AFWLFLVALFALPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY+   L + YG+S WL +    +++    +++G+ +++  G +L + T+       
Sbjct: 69  GVGAYATAFLTTAYGVSPWLGLIAGVVLTALVALVLGVVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +     GI     L   G    +                 +YY++  +   +
Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  + 
Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  S  I  + + ++GG+  +       AI+  + +    +      +   F  
Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + + L++      +  
Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313


>gi|283782296|ref|YP_003373051.1| inner-membrane translocator [Pirellula staleyi DSM 6068]
 gi|283440749|gb|ADB19191.1| inner-membrane translocator [Pirellula staleyi DSM 6068]
          Length = 381

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 77/338 (22%), Positives = 141/338 (41%), Gaps = 18/338 (5%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            ++  +            +    + I+ + A GL++VVG  GLL+L     + IGAY   
Sbjct: 37  VIVALILYPFLPIPATYGTQLSNLFIFAILALGLNVVVGYTGLLNLGIAAFFGIGAYITG 96

Query: 83  I----LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           I        +G +    + V+ + +GA G+++G P+L+ RGDYLA+ TL   E+ +  L 
Sbjct: 97  ILMASPTYPFGWNFVPTLVVATLGAGAAGLMLGAPTLRLRGDYLALVTLGFGEVLRTSLE 156

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
             + IT G   +                         +       YY+ L +  +   ++
Sbjct: 157 NLEEITGGTRTLGPIPPPA--------PETLIGLEFDWSQDFRPFYYLNLIVLAIVVKLL 208

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+ +  AW  IR+++ A   +  +    K+SAFA  +A  G+AG+ +A +    S 
Sbjct: 209 FNLERSKLGRAWVAIREDELAATCMGISAARVKMSAFAAGAAIAGLAGSLYAINLGNTSA 268

Query: 259 D-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD---- 313
              F F+ +I+++  VILGG+ S+        +LIG   +   +                
Sbjct: 269 PAAFDFNRSIMMLCCVILGGLGSIRGTLLGVLLLIGFDNVLSPILDGLIQQSGLNPDGSR 328

Query: 314 -CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
             +F+     +  +AL L++ +R   L+        L 
Sbjct: 329 FLTFSSWRLLIFGLALILMMRLRPEGLIPASRVQLELH 366


>gi|91782127|ref|YP_557333.1| branched chain amino acid ABC transporter ATPase/inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91686081|gb|ABE29281.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
           / amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Burkholderia xenovorans LB400]
          Length = 646

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 65/295 (22%), Positives = 134/295 (45%), Gaps = 16/295 (5%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                    Y   +   I+IY +  +GL IVVG  G +SL     + +GAY+  +L  + 
Sbjct: 18  VFPVLSGNPYYIHLLETIMIYAILLFGLDIVVGYTGQVSLGHAGLFGVGAYTAGVLFFKL 77

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           G+  ++  P++ +++   G I+ LP+L+  G YLA+ TL    I Q ++ +   +TNG  
Sbjct: 78  GMPFFVTAPLAILVTAGFGAILALPALRVSGPYLAMVTLAFGTIIQILINEMDFLTNGPM 137

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G+ +    +                      E+  Y+++  +   S  ++  + R+ +  
Sbjct: 138 GVKIPKPSFGGRPM----------------NEVEYYWLVAALLVASLIVVHRVLRSHLGR 181

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           A+  +RD+  A   +  ++   K+ AF +S+ F G+AG  ++ S   ISP+ + F   I+
Sbjct: 182 AFEALRDSPIASDCMGVSVYRYKVYAFVISAGFAGLAGCLYSYSEQYISPNTYNFELTIL 241

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            +  +I+GG  + +     +AI++ + +L   ++ +   + +            L
Sbjct: 242 FLLAIIMGGRKTRTGALLGSAIIVLLPKLLDDIDMFRTVASVLAAVVVIGAGVAL 296


>gi|167921081|ref|ZP_02508172.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei BCC215]
          Length = 594

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 120/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V   +L    GA +  +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   AFWLFLVALFVLPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY+   L + YG+S WL +    +++    +++G+ +++  G +L + T+       
Sbjct: 69  GVGAYAAAFLTTAYGVSPWLGLIAGVVLTALVALVLGVVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +     GI     L   G    +                 +YY++  +   +
Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  + 
Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  S  I  + + ++GG+  +       AI+  + +    +      +   F  
Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + + L++      +  
Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313


>gi|167582848|ref|ZP_02375722.1| branched-chain amino acid ABC tranpsorter, permease/ATP-binding
           protein [Burkholderia thailandensis TXDOH]
          Length = 594

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 49/327 (14%), Positives = 116/327 (35%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V    L    GA +  +Y  ++   I +  + A GL ++ G  G+ S       
Sbjct: 9   ALWLFLVVMFALPALPGAARVPEYWITLLNYIGLDAIVAVGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IGAY+   L + YG S WL +    +++    + +G  +++  G +L + T+       
Sbjct: 69  GIGAYATAYLTTAYGASPWLGLIAGVVVTALVALALGAVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +     GI     L   G    +                 +YY++  +   +
Sbjct: 129 FLFGNLDWL-GKYDGINGIPALTVFGQAFDT--------------GRSLYYLIWIVVLAA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + +++ F  ++    ++G  +A  + 
Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWMRVAIFVYAAVLASISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  +  I  + + ++GG+  +       AI+  + +    +      +   F  
Sbjct: 234 AVNPTPFGLNHGIEFLFMAVIGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + + L++      +  
Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313


>gi|148258290|ref|YP_001242875.1| ABC transporter permease/ATP-binding protein [Bradyrhizobium sp.
           BTAi1]
 gi|146410463|gb|ABQ38969.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter ATP-binding protein 1,
           HAAT family [Bradyrhizobium sp. BTAi1]
          Length = 589

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 60/323 (18%), Positives = 120/323 (37%), Gaps = 22/323 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V+ +L+           +   +   I +  + A GL ++ G  GL S         GA
Sbjct: 7   LIVFAVLVAAIPFIPGVPPFWIVLLDNIGLSALVAMGLVLLTGVGGLTSFGQAAFVGFGA 66

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L ++YG+S WL +P+S ++SG   +++GL +++  G YL + TL        +  
Sbjct: 67  YTTAVLSAQYGVSPWLTLPLSLLVSGLAAVLLGLVTVRLSGHYLPLGTLAWGLGLYYLFS 126

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           K   +     GI     L      +                   +Y+ +     ++A + 
Sbjct: 127 KLAFL-GRNDGISGIPPLSIGSLKMLD--------------PGTIYFAIWAAVLIAALLT 171

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L  +    A R +R    A  +       AKL  F  ++   G++G  +A     ++P
Sbjct: 172 MNLLDSRTGRAIRALRRGHIAAEAFGVYSPRAKLLVFIYAAVLAGLSGWLYAHFTRAVNP 231

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F     I  + + ++GG   +       AI++ + E+         +           
Sbjct: 232 TPFGAQAGIEYLFVAVVGGAGYVWGGVLGAAIVVILKEVLQSYLPLLLHGE-------GQ 284

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
             T +  I L  ++ +    L  
Sbjct: 285 LETIVFGILLVTLLQLAPTGLWP 307


>gi|33594439|ref|NP_882083.1| putative branched-chain amino acid transport system protein
           [Bordetella pertussis Tohama I]
 gi|33564514|emb|CAE43829.1| putative branched-chain amino acid transport system protein
           [Bordetella pertussis Tohama I]
 gi|332383850|gb|AEE68697.1| putative branched-chain amino acid transport system protein
           [Bordetella pertussis CS]
          Length = 598

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 125/325 (38%), Gaps = 22/325 (6%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            L + + ++L      + + ++  +    I +  M A GL ++ G  GL S        +
Sbjct: 4   FLLIAFIVVLAGLPLLSATPEFWITQLNYIGLAAMVALGLVLLTGVGGLTSFGQAAFVGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +L ++Y +S WL +PV  +++     ++GL +L+  G YL + T+        +
Sbjct: 64  GAYTTALLTTQYDISPWLALPVGLLVTAVVAFLLGLITLRLSGHYLPLGTIAWGLSLYYL 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                 +     GI   + +   G ++ S                 +YY++     L+  
Sbjct: 124 FGNLDWL-GKHDGIAGIEPISLFGWSLASGRH--------------IYYLIWVFVLLALW 168

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               L  +    A R ++       S+       K+  F  ++    ++G  +A  +  +
Sbjct: 169 ATRNLLDSRPGRAIRALKSGAGMAESMGVNTGIYKIVIFVWAALLACLSGWLYAHMQRAV 228

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP  F  +  I  + + ++GG   +      +A+++G+ +    +     ++   F    
Sbjct: 229 SPSPFGLNYGIEYLFMAVVGGAGHVWGALLGSAVILGIKDQLQNILPKLIDTNANF---- 284

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                    + + LV+   S+ L  
Sbjct: 285 ---ELIFFGVLMILVLQYASNGLWP 306


>gi|83310903|ref|YP_421167.1| ABC-type branched-chain amino acid transport system, permease
           component [Magnetospirillum magneticum AMB-1]
 gi|82945744|dbj|BAE50608.1| ABC-type branched-chain amino acid transport system, permease
           component [Magnetospirillum magneticum AMB-1]
          Length = 415

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 174/346 (50%), Gaps = 23/346 (6%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             ++  +         +      S + +      +LIYVM  WGL+IVVG  GLL L  V
Sbjct: 81  RAMMVYVGWAMVAFALILPFLPFSGRNLVDKATLVLIYVMLGWGLNIVVGLAGLLDLGFV 140

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             YA+GAYSY +L   +GLS W+ +P++ +++ A GM++G P L+ RGDY+AI T+ + E
Sbjct: 141 AFYAVGAYSYALLSQTFGLSFWVCLPLAGLLAAAFGMVLGFPVLRLRGDYIAIVTMGLGE 200

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFM 183
           I + +L  W+ +T G  GI   +R    G +         ++   FF    S     IF+
Sbjct: 201 IVRVVLQNWQDVTGGPNGISGIERPSLFGLSFKMVPPEGSQTFAEFFGLDYSADHRVIFL 260

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           Y+++L +  L+  I L +RR  +  AW  +R+++ A  SL       KLSAFA  + F G
Sbjct: 261 YFLILALALLTNVITLRIRRLPVGRAWEALREDEIACRSLGINPTLVKLSAFATGAMFAG 320

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
            AG+FFA  +  ISP+ F F E+ ++++IV+LGGM S   I  A  +L+G+ E    +  
Sbjct: 321 FAGSFFATRQGFISPESFTFIESAVILAIVVLGGMGSQIGIVLAALLLVGLPEWFREL-- 378

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
                                  A+ L++L +   LL  R P+  L
Sbjct: 379 -------------QQFRMLAFGGAMVLIMLWKPAGLLSTREPTIRL 411


>gi|91976368|ref|YP_569027.1| ABC transporter related [Rhodopseudomonas palustris BisB5]
 gi|91682824|gb|ABE39126.1| ABC transporter related [Rhodopseudomonas palustris BisB5]
          Length = 589

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 66/334 (19%), Positives = 127/334 (38%), Gaps = 27/334 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + ++  I    AV+  L +   +       +   +   I +  + A GL ++ G  GL S
Sbjct: 1   MPRWLPIALFAAVMAALPMIPGIPP-----FWIVLLDNIGLAALVAMGLVLLTGVGGLTS 55

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                    GAY+   L + YG+S WL +P+S +++GA  +++GL +++  G YL + T+
Sbjct: 56  FGQAAFCGFGAYTTGYLTTVYGVSPWLTLPLSLLVAGAAAVLLGLMTVRLSGHYLPLGTI 115

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                   +  K   +     GI     L      +                   +Y+V+
Sbjct: 116 AWGISLYYLFSKLDFL-GRNDGISRIPPLSIGTVQMFDPET--------------IYFVI 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             M  +SA + + L  +    A R +R    A  +       AKL  F  ++   G++G 
Sbjct: 161 WAMVLISALLTMNLLDSRTGRAIRALRRGHIAAEAFGVQTARAKLLVFIYAAVLAGLSGW 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A  +  ++P  F     I  + I ++GG   +       AI+I + E+  G     F 
Sbjct: 221 LYAHFQRSVNPTPFGPQAGIEYLFIAVVGGAGYVWGGVLGAAIVIVLKEVLQGYLPMVFG 280

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                          +  I L +++ +    +  
Sbjct: 281 GQ-------GQLEIIVFGILLVVLLQLAPGGVWP 307


>gi|53724001|ref|YP_104447.1| branched-chain amino acid ABC transporter permease/ATP-binding
           protein [Burkholderia mallei ATCC 23344]
 gi|67643077|ref|ZP_00441826.1| ABC transporter, hydrophobic amino acid uptake transporter
           [Burkholderia mallei GB8 horse 4]
 gi|121600309|ref|YP_994648.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein
           [Burkholderia mallei SAVP1]
 gi|124386557|ref|YP_001027581.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein
           [Burkholderia mallei NCTC 10229]
 gi|126450667|ref|YP_001082521.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein
           [Burkholderia mallei NCTC 10247]
 gi|167001266|ref|ZP_02267065.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           mallei PRL-20]
 gi|254174917|ref|ZP_04881578.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           mallei ATCC 10399]
 gi|254201523|ref|ZP_04907887.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           mallei FMH]
 gi|254206861|ref|ZP_04913212.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           mallei JHU]
 gi|52427424|gb|AAU48017.1| branched-chain amino acid ABC tranpsorter, permease/ATP-binding
           protein [Burkholderia mallei ATCC 23344]
 gi|121229119|gb|ABM51637.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           mallei SAVP1]
 gi|124294577|gb|ABN03846.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           mallei NCTC 10229]
 gi|126243537|gb|ABO06630.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           mallei NCTC 10247]
 gi|147747417|gb|EDK54493.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           mallei FMH]
 gi|147752403|gb|EDK59469.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           mallei JHU]
 gi|160695962|gb|EDP85932.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           mallei ATCC 10399]
 gi|238524326|gb|EEP87759.1| ABC transporter, hydrophobic amino acid uptake transporter
           [Burkholderia mallei GB8 horse 4]
 gi|243062889|gb|EES45075.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           mallei PRL-20]
          Length = 594

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 119/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V    L    GA +  +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   AFWLFLVALFALPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY+   L + YG+S WL +    +++    +++G+ +++  G +L + T+       
Sbjct: 69  GVGAYAAAFLTTAYGVSPWLGLIAGVVLTALVALVLGVVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +     GI     L   G    +                 +YY++  +   +
Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  + 
Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  S  I  + + ++GG+  +       AI+  + +    +      +   F  
Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + + L++      +  
Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313


>gi|55981301|ref|YP_144598.1| branched-chain amino acid ABC transporter permease [Thermus
           thermophilus HB8]
 gi|55772714|dbj|BAD71155.1| branched-chain amino acid ABC transporter, permease protein
           [Thermus thermophilus HB8]
          Length = 443

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 88/351 (25%), Positives = 154/351 (43%), Gaps = 17/351 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A+   +LL     A  +  +I  +GIQI I+   + GL++VVG  GLL L     +A+G
Sbjct: 91  VALGLAILLLSVPIAGFANTFIFELGIQIGIFAAMSLGLNVVVGMAGLLDLGYAAFFAVG 150

Query: 78  AYSYVILGSR------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           AY++ I GS              G  ++L + ++ + +   G+++GLP+L+ RGDYLAI 
Sbjct: 151 AYTWAIFGSPQAGKFLQGNFPLPGEYMYLFMLIAVVTTAITGLLIGLPALRLRGDYLAIV 210

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR--FFRFPSSFVIYEIFM 183
           TL + E+ + +        N   G      +          +             Y++F 
Sbjct: 211 TLGLGEVVRILANNLDHPINITNGPQGITPVGRPPIDWFRSLMGALGVRLDETTDYQLFF 270

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           Y ++L M  L     + L  +    AW  IR+++ A  ++   ++  KL AF   +AF G
Sbjct: 271 YLLVLAMIGLVVLANVNLANSRFGRAWVAIREDEIAAQAMGIPLLPTKLIAFMTGAAFSG 330

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           + G  + A R  +SP+ F    +I ++++VILGGM S+       A L  +         
Sbjct: 331 VMGVIYGAQRTFVSPESFTLLASITILAMVILGGMGSIPGAILGAAALTILNLDILKTFS 390

Query: 304 YYFNSLLKFDCS---FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            +  + L +  S          +  + L L+++ R   L+        LE 
Sbjct: 391 EFVRTSLPWIPSQVDPAKYERLVFGLILVLMMIYRPQGLIPEARHRAELEE 441


>gi|115522622|ref|YP_779533.1| ABC transporter related [Rhodopseudomonas palustris BisA53]
 gi|115516569|gb|ABJ04553.1| ABC transporter related [Rhodopseudomonas palustris BisA53]
          Length = 596

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 58/327 (17%), Positives = 113/327 (34%), Gaps = 19/327 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++     LL  L      +  Y   +  ++LI   F   L +++G  GL+S      +  
Sbjct: 9   VVVFFVILLACLVALPFFTGPYPVKLITRMLILATFVLSLDLLIGVTGLVSFGHAAFFGC 68

Query: 77  GAYSYVILG-SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GAY+   +       ++++ +    +  G   +++G  +   RG Y  + TL   ++   
Sbjct: 69  GAYAVYFVSPESEAANVFVALGAGLLAGGLVALVVGAFATLTRGFYFIMVTLAAGQMLFA 128

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +                              +  F             YYV L +   + 
Sbjct: 129 LFHDTDIAKGSDGAYINIKP----------ELTVFGMGLLDFSDRRQFYYVCLAILVGAY 178

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++  L R+      + IR N+    SL       KL+AF ++    G+AGA FA+    
Sbjct: 179 FLLFALVRSPFGRVLQGIRANEVRMSSLGYNAYRYKLAAFTLAGMLAGLAGALFASIDGF 238

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++PD+  + ++ + I +V+LGG  +L            + E+          +       
Sbjct: 239 VTPDLLNWHQSGLAIMMVVLGGAGTLFGPILGALAYASLEEVL--------KTASIVGPF 290

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                       L + +LM    L  L
Sbjct: 291 VAEHWRLGTGATLIVAVLMSPEGLAGL 317


>gi|220904748|ref|YP_002480060.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869047|gb|ACL49382.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 407

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 92/323 (28%), Positives = 150/323 (46%), Gaps = 26/323 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L + +         Y  ++ I  L+Y+M A GL+IVVG  G L L  V  YA+GAY+Y 
Sbjct: 96  ILAVIMIAMPLVVSFYQTNIMISALLYIMLALGLNIVVGLAGQLVLGYVAFYAVGAYAYG 155

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +L   +G   W+ +PV   ++   G+ +G P L+ RGDYLAI TL   EI +  L  W  
Sbjct: 156 LLHQFFGWGFWVCLPVGGFVAVIFGLALGFPVLRLRGDYLAIVTLGFGEIVRLALQNWTS 215

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+    R  F                       ++YY++L    ++  +I  L+
Sbjct: 216 LTGGPRGVGDIPRPGFF-----------GMDMDISTSTTYVYYLVLAAVAITIIVISRLK 264

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            + +  A + +R+++ A  ++   I   KLSAFA+ S + G AG  FAA    I+P  F 
Sbjct: 265 NSRVGLALQALREDEIACEAMGIDITRVKLSAFALGSCWAGFAGVIFAAKTTYINPSSFT 324

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F E+ +++S+V+LGGM S++ +  A  ILI   E     + Y                  
Sbjct: 325 FMESAMILSMVVLGGMGSITGVVIAALILILAPEYLRAFSEY---------------RML 369

Query: 323 LMVIALFLVILMRSHSLLRLRTP 345
           +    + ++++ R   L+     
Sbjct: 370 IFGAIMVIMMIFRPQGLISGERR 392


>gi|295696001|ref|YP_003589239.1| inner-membrane translocator [Bacillus tusciae DSM 2912]
 gi|295411603|gb|ADG06095.1| inner-membrane translocator [Bacillus tusciae DSM 2912]
          Length = 452

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 91/349 (26%), Positives = 149/349 (42%), Gaps = 31/349 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
               AVV   +L L      + +    +  Q+ IY+  A GL+IVVG  GLL L  V  +
Sbjct: 64  WIWAAVVLGAILPLAASTGPAYESYMEVATQMGIYIAMAVGLNIVVGFAGLLDLGFVAFF 123

Query: 75  AIGAYSYVILGSRYGLSI-------------WLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           ++GAY+Y I  S                   WL +P+   I+G  G+++GLP L+ +GDY
Sbjct: 124 SLGAYTYAIFFSDQANQFLSGHHFPLPGGLFWLFLPLGMFIAGLFGVLLGLPVLRVKGDY 183

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LAI TL   EI + I        N   G      +        +      +         
Sbjct: 184 LAIVTLGFGEIIRIIFNNLDKPVNITNGAIGISSVRPPELFGVTFTFPHHY--------- 234

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             YY++L +       +  L  + I  AW+ +R+++ A  ++   ++  KL+AFA  ++F
Sbjct: 235 --YYLVLVLLAGVFYAVHRLEHSRIGRAWKAVREDEIAAQAMGVPLVRTKLTAFAAGASF 292

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG-----VVE 296
            G+ G  FAA +  I P  F   E+I ++ +VILGGM SL        ++       + +
Sbjct: 293 SGLMGVVFAAKQAFIDPTSFTMLESITILVMVILGGMGSLPGAVVGACLVTVLNLQLLPQ 352

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHT--TLMVIALFLVILMRSHSLLRLR 343
           L   +N      ++ F  + +       L  + L L  + R   +L  R
Sbjct: 353 LTNWLNQLAAQGMISFPPALSPSKMQRFLFGMLLILFTVFRPKGVLPAR 401


>gi|83721141|ref|YP_443814.1| branched-chain amino acid ABC transporter permease/ATP-binding
           protein [Burkholderia thailandensis E264]
 gi|167620988|ref|ZP_02389619.1| branched-chain amino acid ABC tranpsorter, permease/ATP-binding
           protein [Burkholderia thailandensis Bt4]
 gi|83654966|gb|ABC39029.1| branched-chain amino acid ABC tranpsorter, permease/ATP-binding
           protein [Burkholderia thailandensis E264]
          Length = 594

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 49/327 (14%), Positives = 116/327 (35%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V    L    GA +  +Y  ++   I +  + A GL ++ G  G+ S       
Sbjct: 9   ALWLFLVVMFALPALPGAARVPEYWITLLNYIGLDAIVAVGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IGAY+   L + YG S WL +    +++    + +G  +++  G +L + T+       
Sbjct: 69  GIGAYATAYLTTAYGASPWLGLIAGVVVTALVALALGAVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +     GI     L   G    +                 +YY++  +   +
Sbjct: 129 FLFGNLDWL-GKYDGINGIPALTVFGQAFDT--------------GRSLYYLIWIVVLAA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + +++ F  ++    ++G  +A  + 
Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWMRVAIFVYAAVLASISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  +  I  + + ++GG+  +       AI+  + +    +      +   F  
Sbjct: 234 AVNPTPFGLNHGIEFLFMAVIGGVAHVWGAVLGGAIVTVLQDYLQTLLPKLLGAEGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + + L++      +  
Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313


>gi|254184038|ref|ZP_04890629.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei 1655]
 gi|184214570|gb|EDU11613.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei 1655]
          Length = 594

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 119/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V    L    GA +  +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   AFWLFLVALFALPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY+   L + YG+S WL +    +++    +++G+ +++  G +L + T+       
Sbjct: 69  GVGAYATAFLTTAYGVSPWLGLIAGVVLTALVALMLGVVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +     GI     L   G    +                 +YY++  +   +
Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  + 
Sbjct: 174 IVSVQNLLNSRAGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  S  I  + + ++GG+  +       AI+  + +    +      +   F  
Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + + L++      +  
Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313


>gi|170745295|ref|YP_001766752.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831]
 gi|170658896|gb|ACB27950.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831]
          Length = 611

 Score =  126 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 69/306 (22%), Positives = 130/306 (42%), Gaps = 30/306 (9%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y  ++ +Q   Y +   GL++V+G  G ++L     + IGAY+  +     GL+ W+ 
Sbjct: 47  SGYALNILMQAATYAIAVIGLTVVLGLCGQINLAQAAFFGIGAYAVGLGTVDGGLNFWIC 106

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +     ++   G  +G  +L+  G YLA+ T+   +I   +L  W P+T+G  G+    R
Sbjct: 107 LITGLGLAVVLGAALGASTLRLGGHYLAMVTISFQQILTLVLTNWIPVTHGPDGVPNIRR 166

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                         + + +  +   ++  + RT +  A R +RD
Sbjct: 167 PALFADGQS------------------YLALCVLVLAVVGWLVWHMPRTRLGRAMRAVRD 208

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N+ A       I   K++AFA+ +   G+ G  FA S   ISPD F F+E+I+ +++ +L
Sbjct: 209 NELAAGVSGIDIYRTKVAAFALGALLAGLGGGLFAGSFTYISPDQFSFAESIVFLTMALL 268

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S       TA+LI + E    +                  +  +  +A+ L+++  
Sbjct: 269 GGVGSPVGAVIGTALLILIPEWLRFLKE------------IPGLYLAIYGLAVILIVVFM 316

Query: 336 SHSLLR 341
              +  
Sbjct: 317 PDGIWG 322


>gi|121595665|ref|YP_987561.1| inner-membrane translocator [Acidovorax sp. JS42]
 gi|120607745|gb|ABM43485.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Acidovorax sp. JS42]
          Length = 358

 Score =  126 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 88/339 (25%), Positives = 160/339 (47%), Gaps = 17/339 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +    LL L L           +    L+YVM A GL+IVVG  GLL L  V  YA+GA
Sbjct: 9   ILGGIALLVLPLVLQYFGNAWVRIADLALLYVMLALGLNIVVGYAGLLDLGYVAFYAVGA 68

Query: 79  YSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           Y + +L S +                 +S+W++IP++ +++   G+++G+P LK RGDYL
Sbjct: 69  YMFGLLASPHLADNFAWFAAQFPTGLHMSLWMVIPLALVLAACTGVLLGIPVLKLRGDYL 128

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           AI TL   EI +  +       N   G     ++  +      L +        +     
Sbjct: 129 AIVTLGFGEIIRIFMNNLDHPVNITNGPKGLGQIDSVKIFGLDLGKRLELFGYDINSVTL 188

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            YY+ L +  ++  +   L+ + I  AW  IR+++ A  ++       KL AF + ++F 
Sbjct: 189 YYYLFLFLVLVTILVCYRLQDSRIGRAWMAIREDEIAAKAMGINTRNMKLLAFGMGASFG 248

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+AGA FAA +  +SP+ F   E+++++++V+LGG+  +  +     +L  + E+   + 
Sbjct: 249 GVAGAMFAAFQGFVSPESFSLMESVMIVAMVVLGGIGHIPGVILGAVLLSALPEVLRYVA 308

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                ++       ++    L+ +A+ +V+L+R   L  
Sbjct: 309 GP-LQAMTDGRLDSSILRQLLIALAMIIVMLLRPRGLWP 346


>gi|333027880|ref|ZP_08455944.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces sp. Tu6071]
 gi|332747732|gb|EGJ78173.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces sp. Tu6071]
          Length = 597

 Score =  126 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 76/350 (21%), Positives = 134/350 (38%), Gaps = 34/350 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +++    +  +    T+       +G  ILI+   A GL++VVG  GLL L  V    +G
Sbjct: 238 VSLAAMFVAAICFPFTQDNDTYALIGTNILIFATVALGLNVVVGLAGLLDLGYVAFLGVG 297

Query: 78  AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           AY+  ++               L +   A +S   G+++G P+L+ RGDYLAI TL   E
Sbjct: 298 AYTAALVSGSPQSSIGVHFPFPLAVLTGAAVSLIFGVVIGAPTLRLRGDYLAIVTLGFGE 357

Query: 132 IFQNILIKW-----KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           IF+  +          + NG  G+     L   G            P          + +
Sbjct: 358 IFRITMNNLNGNSGPDLVNGSQGVPNIPDLELFGFKFGEAHDVLGLPLGRSGN---YFLL 414

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L    +   +     ++ I  AW  IR+++ A  ++       KL AFA+ +   G+AG
Sbjct: 415 MLLFTAIVLLVFHRSGQSRIGRAWVAIREDETAASAMGINGFRLKLLAFALGATLAGLAG 474

Query: 247 AFFAASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
              A     ++P+ ++F+      +  +I+ VILGGM +++      A+L  + E    M
Sbjct: 475 TVQAHVNYSVTPEQYQFAGTAPPNSAFLIAAVILGGMGTITGPLIGAALLFLIPEKLEFM 534

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             Y                           + +R   ++  R        
Sbjct: 535 QKYQLLLFGLALILL---------------MRLRPEGIVPDRRKQLEFHE 569


>gi|134281498|ref|ZP_01768206.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei 305]
 gi|134247165|gb|EBA47251.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei 305]
          Length = 594

 Score =  126 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 119/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V    L    GA +  +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   AFWLFLVALFALPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY+   L + YG+S WL +    +++    +++G+ +++  G +L + T+       
Sbjct: 69  GVGAYATAFLTTAYGVSPWLGLIAGVVLTALVALMLGVVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +     GI     L   G    +                 +YY++  +   +
Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  + 
Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  S  I  + + ++GG+  +       AI+  + +    +      +   F  
Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVLGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + + L++      +  
Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313


>gi|167896464|ref|ZP_02483866.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei 7894]
          Length = 594

 Score =  126 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 119/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V    L    GA +  +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   AFWLFLVALFALPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY+   L + YG+S WL +    +++    +++G+ +++  G +L + T+       
Sbjct: 69  GVGAYAAAFLTTAYGVSPWLGLIAGVVLTALVALVLGVVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +     GI     L   G    +                 +YY++  +   +
Sbjct: 129 FLFGNLDWL-GKYDGINGIPALALFGHAFDT--------------GRSLYYLIWIVVLAA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  + 
Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  S  I  + + ++GG+  +       AI+  + +    +      +   F  
Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + + L++      +  
Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313


>gi|149204316|ref|ZP_01881283.1| inner-membrane translocator ABC transporter [Roseovarius sp.
           TM1035]
 gi|149142201|gb|EDM30248.1| inner-membrane translocator ABC transporter [Roseovarius sp.
           TM1035]
          Length = 846

 Score =  126 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 73/324 (22%), Positives = 136/324 (41%), Gaps = 31/324 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +  +  L     + A  +  Y+  +     + V+   GL+I++G  G +S   V  +AIG
Sbjct: 24  ILGIVALTAITIMLALNANGYLVFILALFALNVVVGVGLNILLGLSGQISFGHVGFFAIG 83

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  I+        WL   VS +IS   GM++ +P+L+  G YLA+ T+  + I ++  
Sbjct: 84  AYTTAIMVIAGFDY-WLAFIVSGIISSFAGMLLAMPALRVAGPYLAMMTIAFAFIVEHAA 142

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I+ + +T G  G+       F               +  + +E  +    + +  +S  +
Sbjct: 143 IELRDLTGGHNGLMGFRSPEF---------------AGRIFFETEVAIAAVLLAGVSLLL 187

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L L R     A R +  +  A  S+       K +AF +S+   G+AGA F   +  IS
Sbjct: 188 FLQLSRGRWGMAMRAVASSDVAAQSIGLNPFAIKTTAFVLSALLAGLAGALFTPLQLFIS 247

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F F ++I+ +  VI+GG   L      + I++ + E+  G+  Y             
Sbjct: 248 PGSFPFFQSILFLLAVIVGGTGRLLGPVIGSLIVVLLPEVLSGLAEY------------- 294

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                +    +  V+L+    ++ 
Sbjct: 295 --RLLIFGGIMMGVLLLAPKGIIG 316


>gi|293606937|ref|ZP_06689284.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292814669|gb|EFF73803.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 607

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 63/322 (19%), Positives = 133/322 (41%), Gaps = 25/322 (7%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L++   +       +  ++ + + ++   +   +IV G  G LSL   + Y IG Y+
Sbjct: 28  LILLIVMFLVPVVMGTPFWTNLFVLLFVFASLSVAWNIVGGYAGQLSLGHAVFYGIGGYT 87

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +L   +G+S W+ +   A+IS A  +++  P+L+ RG + A+AT+ + E+ + ++I  
Sbjct: 88  ATLLTQNFGISPWIGMLAGAVISAAVAIVISYPTLRLRGPFFALATIAILEVVRLLVIHE 147

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           +  T G +GI +   + +     R                I    +  G+      +   
Sbjct: 148 ESWTGGSSGISLPLNIGWAWIVFREK--------------INYVIIAFGLFLFVTWVSWA 193

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +R++ I +    IR+ + A  ++    +  K+ A  VS+    + G F       + P  
Sbjct: 194 IRKSRIGHYLIAIREREDAALAVGIHTVRVKIIAAVVSAMLTSIIGTFHITYLTFVDPSS 253

Query: 261 -FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F    +I V    ++GG+ +++     T +++ + EL  G      N +          
Sbjct: 254 AFSLELSIQVAMFALIGGLGTVAGPIAGTFLVLPIAELARGWLSSVGNGM---------- 303

Query: 320 HTTLMVIALFLVILMRSHSLLR 341
           H  +  + L  V+L     L  
Sbjct: 304 HGLIYGLILVAVVLTIPRGLAG 325


>gi|320449592|ref|YP_004201688.1| branched-chain amino acid ABC transporter permease [Thermus
           scotoductus SA-01]
 gi|320149761|gb|ADW21139.1| branched-chain amino acid ABC transporter, permease protein
           [Thermus scotoductus SA-01]
          Length = 442

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 88/340 (25%), Positives = 155/340 (45%), Gaps = 17/340 (5%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR- 87
              A  +  ++  +GIQI IY   A GL++VVG  GLL L     +A+GAY++ I GS  
Sbjct: 102 VPLAGFANTFVFELGIQIGIYAAMALGLNVVVGMAGLLDLGYAAFFAVGAYTWAIFGSEQ 161

Query: 88  -----------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                       G  ++L + ++ + +   G+++GLP+L+ RGDYLAI TL + E+ + +
Sbjct: 162 AKNFMQGNFPLPGEYMYLFMGIAIVTTALTGLVIGLPALRLRGDYLAIVTLGLGEVVRIL 221

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIR--FFRFPSSFVIYEIFMYYVLLGMCFLS 194
                   N   G      +          +             Y++F Y+++L M  L 
Sbjct: 222 ANNLDHPINFTNGPQGITPVQRPPIDWFRQLMATLGVHLDRTTDYQLFFYFLVLLMIGLV 281

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + + L  +    AW  IR+++ A  S+   ++  KL AF   +AF G+ G  FAA R 
Sbjct: 282 VLVNVNLANSRFGRAWVAIREDEVAARSMGIPLLPTKLLAFMTGAAFSGVMGVIFAAQRT 341

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV-VELCCGMNFYYFNSLLKFD 313
            +SP+ F    +I ++ +VILGGM S+       A L  + +++    + +   SL +  
Sbjct: 342 FVSPESFTLLASITILGMVILGGMGSIPGAILGAAALTILNLDVLKTFSEFVRTSLPQIP 401

Query: 314 CSFNMRHT--TLMVIALFLVILMRSHSLLRLRTPSNFLER 351
              +       +  + L L+++ R   L+  +     +E 
Sbjct: 402 NQVDPAKYERLVFGLILVLMMIFRPEGLIPEKRHKAEMEE 441


>gi|119386285|ref|YP_917340.1| ABC transporter related [Paracoccus denitrificans PD1222]
 gi|119376880|gb|ABL71644.1| amino acid/amide ABC transporter ATP-binding protein 2, HAAT family
           / amino acid/amide ABC transporter membrane protein 2,
           HAAT family / amino acid/amide ABC transporter
           ATP-binding protein 1, HAAT family [Paracoccus
           denitrificans PD1222]
          Length = 838

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 118/324 (36%), Gaps = 34/324 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++    L L            +  ++++IY + A GL+++VG  GL+S    + +   A
Sbjct: 12  LLIVAAGLVLLPVLLGRIGLGANSAVEVVIYALAAMGLNVLVGYTGLVSFGHGVWFGTAA 71

Query: 79  YSYVILG-SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           Y   +   S    S+ + + V  + +     ++G   L+ RG Y ++ TL +S +   + 
Sbjct: 72  YIVGLTARSMGNASMAVSLTVGVVATALIAALVGFLVLRRRGVYFSLMTLALSAMGFQLA 131

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +W  +T G+ G+   +R   L   +                    Y  +  + F   ++
Sbjct: 132 FRWTDVTGGENGLGGIERPAMLDANLS------------------FYIFVALLGFAVIAL 173

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  + ++   +    IR+N     +L   +   KL AF +S+A  G+AG          S
Sbjct: 174 LQRVLQSPFGSVLEAIRENDGRAQALGYDVRRYKLKAFVLSAAITGLAGGLLLYKNRMTS 233

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            +      +  ++++V++GGM      A      I   E     +  +            
Sbjct: 234 AEPMSIIFSGELLAMVVIGGMRGYLGPALGALFYILFREYLSMYSENW------------ 281

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                   +     ++     ++ 
Sbjct: 282 ---LLWFGLIFVGFVIFARQGMIG 302


>gi|318056307|ref|ZP_07975030.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces sp. SA3_actG]
 gi|318075970|ref|ZP_07983302.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces sp. SA3_actF]
          Length = 600

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 75/350 (21%), Positives = 133/350 (38%), Gaps = 34/350 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +++    +  +    T+       +G  ILI+   A GL++VVG  GLL L  V    +G
Sbjct: 241 VSLAAMFVAAICFPFTQDNDTYALIGTNILIFATVALGLNVVVGLAGLLDLGYVAFLGVG 300

Query: 78  AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           AY+  ++               L +   A +S   G+++G P+L+ RGDYLAI TL   E
Sbjct: 301 AYTAALVSGSPQSSIGVHFPFPLAVLTGAAVSLVFGVVIGAPTLRLRGDYLAIVTLGFGE 360

Query: 132 IFQNILIKW-----KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           IF+  +          + NG  G+     L   G                       + +
Sbjct: 361 IFRITMNNLNGNSGPDLVNGSQGVPNIPDLELFGFKFGEAHDVLGLSLGRSGN---YFLL 417

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L    +   +     ++ I  AW  IR+++ A  ++       KL AFA+ +   G+AG
Sbjct: 418 MLLFTAIVLLVFHRSGQSRIGRAWVAIREDETAASAMGINGFRLKLLAFALGATLAGLAG 477

Query: 247 AFFAASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
              A     ++P+ ++F+      +  +I+ VILGGM +++      A+L  + E    M
Sbjct: 478 TVQAHVNYSVTPEQYQFAGTAPPNSAFLIAAVILGGMGTITGPLIGAALLFLIPEKLEFM 537

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             Y                           + +R   ++  R        
Sbjct: 538 QKYQLLLFGLALILL---------------MRLRPEGIVPDRRKQLEFHE 572


>gi|182439314|ref|YP_001827033.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|178467830|dbj|BAG22350.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 598

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 80/347 (23%), Positives = 134/347 (38%), Gaps = 28/347 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +   L+       T+  +    +G  ILI+   A GL++VVG  GLL L  V    +G
Sbjct: 242 VTLTAALIAAFCFPFTQQNEQYALIGANILIFATVALGLNVVVGLAGLLDLGYVAFLGVG 301

Query: 78  AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           AY+  ++              W  +   A  S   G+++G P+L+ RGDYLAI TL   E
Sbjct: 302 AYAAALVSGSPLSPVGVQFPFWAAVLTGAAASLVFGVVIGAPTLRLRGDYLAIVTLGFGE 361

Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           IF+  +     ++      G      +  L                 +      Y ++L 
Sbjct: 362 IFRLTVNALNGVSGPDLTNGSQGIPSIPDLNLFGFDFGVSHDIGGITLGRSANYYLLMLV 421

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              +   +      + I  AW  IR+++ A  ++       KL AFA+ +   G+AG   
Sbjct: 422 FTAVVVLVFRRSGESRIGRAWVAIREDETAATAMGINAFRLKLLAFALGATLAGLAGTVQ 481

Query: 250 AASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A     ++P+ ++F+      +  +++ VILGGM +LS      A+L  +      M  Y
Sbjct: 482 AHVSYTVTPEQYQFAGSVPPNSAFLLAAVILGGMGTLSGPLVGAALLYLIPAKLQFMQDY 541

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                             L  IAL L++  R   L+  R        
Sbjct: 542 ---------------QLFLFGIALILLMRFRPEGLVADRRKQLEFHE 573


>gi|46199270|ref|YP_004937.1| branched-chain amino acid transport system permease protein livM
           [Thermus thermophilus HB27]
 gi|46196895|gb|AAS81310.1| branched-chain amino acid transport system permease protein livM
           [Thermus thermophilus HB27]
          Length = 443

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 87/351 (24%), Positives = 153/351 (43%), Gaps = 17/351 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +   +LL     A  +  +I  +GIQI I+   + GL++VVG  GLL L     +A+G
Sbjct: 91  VVLGLAILLLSVPIAGFANTFIFELGIQIGIFAAMSLGLNVVVGMAGLLDLGYAAFFAVG 150

Query: 78  AYSYVILGSR------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           AY++ I GS              G  ++L + ++ + +   G+++GLP+L+ RGDYLAI 
Sbjct: 151 AYTWAIFGSPQAGKFLQGNFPLPGEYMYLFMLIAVVTTAITGLLIGLPALRLRGDYLAIV 210

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR--FFRFPSSFVIYEIFM 183
           TL + E+ + +        N   G      +          +             Y++F 
Sbjct: 211 TLGLGEVVRILANNLDHPINITNGPQGITPVGRPPIDWFRSLMGALGVRLDETTDYQLFF 270

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           Y ++L M  L     + L  +    AW  IR+++ A  ++   ++  KL AF   +AF G
Sbjct: 271 YLLVLVMIGLVVLANVNLANSRFGRAWVAIREDEIAAQAMGIPLLPTKLIAFMTGAAFSG 330

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           + G  + A R  +SP+ F    +I ++++VILGGM S+       A L  +         
Sbjct: 331 VMGVIYGAQRTFVSPESFTLLASITILAMVILGGMGSIPGAILGAAALTILNLDILKTFS 390

Query: 304 YYFNSLLKFDCS---FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            +  + L +  S          +  + L L+++ R   L+        LE 
Sbjct: 391 EFVRTSLPWIPSQVDPAKYERLVFGLILILMMIYRPQGLIPEARHRAELEE 441


>gi|302877548|ref|YP_003846112.1| inner-membrane translocator [Gallionella capsiferriformans ES-2]
 gi|302580337|gb|ADL54348.1| inner-membrane translocator [Gallionella capsiferriformans ES-2]
          Length = 366

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 90/326 (27%), Positives = 150/326 (46%), Gaps = 14/326 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---------- 88
              +    ++Y+M A GL+IVVG  GLL L  +  +A+GAY Y + GS +          
Sbjct: 35  WVRIVDFAMLYIMLALGLNIVVGYAGLLDLGYIAFFAVGAYCYALTGSPHLALAFPLLFP 94

Query: 89  ---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
               LS W+++P++A+++G  G+++G P+L+ RGDYLAI TL   EI +  +       N
Sbjct: 95  DGLHLSFWIVLPLAAVLAGGFGVLLGAPTLRLRGDYLAIVTLGFGEIIRIFMNNLNAPVN 154

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
              G     R+  +     SL    +     +      +Y+ L    L   +   L ++ 
Sbjct: 155 FTNGPQGISRIDPISVAGVSLNSTQQVMGITLPSVHLYFYLFLAFTMLVVFVSSRLEKSR 214

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           I  AW  IR+++ A  ++       KL AFA+ + F G++G  FA  +  +SP+ F   E
Sbjct: 215 IGRAWMAIREDEIAASAMGINTRNLKLLAFAMGAMFGGVSGTLFAGFQGFVSPESFSLME 274

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-FDCSFNMRHTTLM 324
           +I+V+ +V+LGGM  +  +     +L  + E+          +L              L 
Sbjct: 275 SIMVLCMVVLGGMGHIYGVILGGLLLALLPEVLRHSVVPLQQALFGKTLIDPESLRMLLF 334

Query: 325 VIALFLVILMRSHSLLRLRTPSNFLE 350
            +AL +V+L R   L   R     LE
Sbjct: 335 GVALIVVMLYRPAGLWPSRVRRRELE 360


>gi|222111882|ref|YP_002554146.1| inner-membrane translocator [Acidovorax ebreus TPSY]
 gi|221731326|gb|ACM34146.1| inner-membrane translocator [Acidovorax ebreus TPSY]
          Length = 358

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 87/339 (25%), Positives = 159/339 (46%), Gaps = 17/339 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +    LL L L           +    L+YVM A GL+IVVG  GLL L  V  YA+GA
Sbjct: 9   ILGGIALLVLPLVLQYFGNAWVRIADLALLYVMLALGLNIVVGYAGLLDLGYVAFYAVGA 68

Query: 79  YSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           Y + +L S +                 +S+W++IP++ +++   G+++G+P LK RGDYL
Sbjct: 69  YMFGLLASPHLADNFAWFAAQFPTGLHMSLWMVIPLALVLAACTGVLLGIPVLKLRGDYL 128

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           AI TL   EI +  +       N   G     ++  +      L +        +     
Sbjct: 129 AIVTLGFGEIIRIFMNNLDHPVNITNGPKGLGQIDSVKIFGLDLGKRLELFGYDINSVTL 188

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            YY+ L +  ++  +   L+ + I  AW  IR+++ A  ++       KL AF + ++F 
Sbjct: 189 YYYLFLFLVLVTILVCYRLQDSRIGRAWMAIREDEIAAKAMGINTRNMKLLAFGMGASFG 248

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+AGA F A +  +SP+ F   E+++++++V+LGG+  +  +     +L  + E+   + 
Sbjct: 249 GVAGAMFGAFQGFVSPESFSLMESVMIVAMVVLGGIGHIPGVILGAVLLSALPEVLRYVA 308

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                ++       ++    L+ +A+ +V+L+R   L  
Sbjct: 309 GP-LQAMTDGRLDSSILRQLLIALAMIIVMLLRPRGLWP 346


>gi|89900622|ref|YP_523093.1| ABC transporter-like protein [Rhodoferax ferrireducens T118]
 gi|89345359|gb|ABD69562.1| ABC transporter related [Rhodoferax ferrireducens T118]
          Length = 648

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 72/308 (23%), Positives = 136/308 (44%), Gaps = 16/308 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            L +V  L             Y   +   ILIY +  +GL IVVG  G +SL     + +
Sbjct: 8   FLLMVLGLAALGLYPVLVPNPYYIHLVETILIYAILLFGLDIVVGYTGQVSLGHAGLFGV 67

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G+Y+   L  + G    L +P +  ++   G ++ LP+L+  G YLA+ TL    I Q +
Sbjct: 68  GSYTAGALFFKLGAPFLLAVPAAIGVTALFGAVLALPALRVTGPYLAMVTLAFGTIIQIL 127

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           + +   +T G  GI V   ++F                   + E+  +YV+  +  L+  
Sbjct: 128 INEMTFLTEGPIGIKVHKPMFFGHK----------------LTEVEYFYVVAVLMVLALV 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++  + ++ +  A+  +RD+  A   +  ++   K+ AF +S+A  G+AG+ +A S + I
Sbjct: 172 VVHRILKSHLGRAFEALRDSPVACDCMGVSVYRYKVYAFVISAALAGLAGSLYAYSEEYI 231

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP+ + F   I+ +  VI+GG  + S       I++ +  L   +  +   + +      
Sbjct: 232 SPNTYNFELTIMFLLAVIMGGRKTRSGALIGAVIVVMLPSLLSDIELFRKIATVLAIAVS 291

Query: 317 NMRHTTLM 324
            M     +
Sbjct: 292 GMAVYNFI 299


>gi|326779966|ref|ZP_08239231.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|326660299|gb|EGE45145.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 597

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 80/347 (23%), Positives = 134/347 (38%), Gaps = 28/347 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +   L+       T+  +    +G  ILI+   A GL++VVG  GLL L  V    +G
Sbjct: 241 VTLTAALIAAFCFPFTQQNEQYALIGANILIFATVALGLNVVVGLAGLLDLGYVAFLGVG 300

Query: 78  AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           AY+  ++              W  +   A  S   G+++G P+L+ RGDYLAI TL   E
Sbjct: 301 AYAAALVSGSPLSPVGVQFPFWAAVLTGAAASLVFGVVIGAPTLRLRGDYLAIVTLGFGE 360

Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           IF+  +     ++      G      +  L                 +      Y ++L 
Sbjct: 361 IFRLTVNALNGVSGPDLTNGSQGIPSIPDLNLFGFDFGVSHDIGGITLGRSANYYLLMLV 420

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              +   +      + I  AW  IR+++ A  ++       KL AFA+ +   G+AG   
Sbjct: 421 FTAVVVLVFRRSGESRIGRAWVAIREDETAATAMGINAFRLKLLAFALGATLAGLAGTVQ 480

Query: 250 AASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A     ++P+ ++F+      +  +++ VILGGM +LS      A+L  +      M  Y
Sbjct: 481 AHVSYTVTPEQYQFAGSVPPNSAFLLAAVILGGMGTLSGPLVGAALLYLIPAKLQFMQDY 540

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                             L  IAL L++  R   L+  R        
Sbjct: 541 ---------------QLFLFGIALILLMRFRPEGLVADRRKQLEFHE 572


>gi|152980782|ref|YP_001354237.1| ABC-type branched-chain amino acid transport system, permease
           component [Janthinobacterium sp. Marseille]
 gi|151280859|gb|ABR89269.1| ABC-type branched-chain amino acid transport system, permease
           component [Janthinobacterium sp. Marseille]
          Length = 404

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 171/379 (45%), Gaps = 40/379 (10%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           + F  + N       LL ++   L+F F+       ++  +    L+Y+M A GL++VVG
Sbjct: 3   NYFDTKNNPRKAYSGLLLILAIALVFPFIAQNFGNSWV-RIMDFALLYIMLALGLNVVVG 61

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRY--------------------------------G 89
             GLL L  +  YAIGAY   +L S                                   
Sbjct: 62  FAGLLDLGYIAFYAIGAYLTALLASPQFAVVLESFVNQYPAIGETLLWVFGPEIAQNGIH 121

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW---KPITNG 146
           LS+W ++P++A+++G  G ++G P+LK RGDYLAI TL   EI +  +        ITNG
Sbjct: 122 LSLWAIVPLAALVAGFFGALLGAPTLKLRGDYLAIVTLGFGEIIRIFMNNLNGPVNITNG 181

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSF---VIYEIFMYYVLLGMCFLSASIILWLRR 203
             GI + D +   G ++                +      Y++ L +C     I + L+ 
Sbjct: 182 PQGINMIDPIRIFGVSLNGEAGSRATVMIGDYAMPSVNAYYFLFLFLCIAIIFISVRLQN 241

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           + +  A+  IR+++ A  ++       KL AFA+ ++F G+AGA FA+ +  +SP+ F  
Sbjct: 242 SRLGRAFVAIREDEIAAKAMGINTRNVKLLAFAMGASFGGIAGAMFASFQGFVSPESFSL 301

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-FDCSFNMRHTT 322
           +E+I V+++V+LGGM  +  +     IL  + E+   +      SL         +    
Sbjct: 302 TESIAVLAMVVLGGMGHIPGVVLGGIILAALPEVLRHVVEPLQQSLFGEVLIDAEVLRQL 361

Query: 323 LMVIALFLVILMRSHSLLR 341
           L  +A+ L++L R   L  
Sbjct: 362 LYGLAMVLIMLYRPSGLWP 380


>gi|282862073|ref|ZP_06271136.1| inner-membrane translocator [Streptomyces sp. ACTE]
 gi|282563098|gb|EFB68637.1| inner-membrane translocator [Streptomyces sp. ACTE]
          Length = 599

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 79/335 (23%), Positives = 131/335 (39%), Gaps = 28/335 (8%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
              T+  +    +G  ILI+   A GL++VVG  GLL L  V    +GAY+  ++     
Sbjct: 256 FPFTQQNEQYALIGANILIFATVALGLNVVVGLAGLLDLGYVAFLGVGAYAAALVSGSPM 315

Query: 90  ------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
                    W  +   A  S   G+++G P+L+ RGDYLAI TL   EIF+  +     +
Sbjct: 316 SPIGVQFPFWAAVLTGAAASLVFGVVIGAPTLRLRGDYLAIVTLGFGEIFRLTVNALNGV 375

Query: 144 TN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
           +      G      +  L      L          +      Y ++L    +   +    
Sbjct: 376 SGPDLTNGSQGIPSIPDLELFGFDLGTSHDVGGFTLGRSANYYLLMLVFTAVVVLVFRRS 435

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             + I  AW  IR+++ A  ++       KL AFA+ +   G+AG   A     ++P+ +
Sbjct: 436 GESRIGRAWVAIREDETAATAMGINAFRLKLLAFALGATLAGLAGTVQAHVSYTVTPEQY 495

Query: 262 KFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +F+      +  +++ VILGGM +LS      A+L  +      M  Y            
Sbjct: 496 QFAGSVPPNSAFLLAAVILGGMGTLSGPLVGAALLYLIPAKLQFMQDY------------ 543

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 L  +AL L++  R   L+  R        
Sbjct: 544 ---QLFLFGLALILLMRFRPEGLVADRRKKLEFHE 575


>gi|302518451|ref|ZP_07270793.1| branched-chain amino acid ABC transporter permease [Streptomyces
           sp. SPB78]
 gi|302427346|gb|EFK99161.1| branched-chain amino acid ABC transporter permease [Streptomyces
           sp. SPB78]
          Length = 600

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 75/351 (21%), Positives = 133/351 (37%), Gaps = 34/351 (9%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            +++    +  +    T+       +G  ILI+   A GL++VVG  GLL L  V    +
Sbjct: 240 AVSLAAMFVAAICFPFTQDNDTYALIGTNILIFATVALGLNVVVGLAGLLDLGYVAFLGV 299

Query: 77  GAYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           GAY+  ++               L +   A +S   G+++G P+L+ RGDYLAI TL   
Sbjct: 300 GAYTAALVSGSPQSSIGVHFPFPLAVLTGAAVSLIFGVVIGAPTLRLRGDYLAIVTLGFG 359

Query: 131 EIFQNILIKW-----KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           EIF+  +          + NG  G+     L   G                       + 
Sbjct: 360 EIFRITMNNLNGNSGPDLVNGSQGVPNIPDLELFGFKFGEAHDVLGLSLGRSGN---YFL 416

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++L    +   +     ++ I  AW  IR+++ A  ++       KL AFA+ +   G+A
Sbjct: 417 LMLLFTAIVLLVFHRSGQSRIGRAWVAIREDETAASAMGINGFRLKLLAFALGATLAGLA 476

Query: 246 GAFFAASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G   A     ++P+ ++F+      +  +I+ VILGGM +++      A+L  + E    
Sbjct: 477 GTVQAHVNYSVTPEQYQFAGTAPPNSAFLIAAVILGGMGTITGPLIGAALLFLIPEKLEF 536

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           M  Y                           + +R   ++  R        
Sbjct: 537 MQKYQLLLFGLALILL---------------MRLRPEGIVPDRRKQLEFHE 572


>gi|320353685|ref|YP_004195024.1| inner-membrane translocator [Desulfobulbus propionicus DSM 2032]
 gi|320122187|gb|ADW17733.1| inner-membrane translocator [Desulfobulbus propionicus DSM 2032]
          Length = 401

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 98/337 (29%), Positives = 157/337 (46%), Gaps = 26/337 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L ++    LF     T    Y  ++    L+YV+   GL+IVVG  GLL L  V  Y
Sbjct: 91  AVTLPLLGIGALFFLAFPTLFSTYQVNIMSTALMYVVLGLGLNIVVGVAGLLDLGYVAFY 150

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GAYSY +L   +GL  W ++P+  ++    G+++G P L+ RGDYLAI TL   EI +
Sbjct: 151 AVGAYSYALLHLHFGLGFWTVLPIGGLLGALFGILLGFPVLRLRGDYLAIVTLGFGEIIR 210

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +L  W   + G +GI    R              F    S     I++YY+++ M   +
Sbjct: 211 LVLENWTEFSQGPSGIANIPRPG-----------LFGIELSLEASIIYLYYLMILMVLFT 259

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +I  L+ + I  AW  +R++  A  ++       KL+AFA+ + + GMAG FFAA   
Sbjct: 260 IFMINRLQNSRIGRAWYALREDDIACQAMGIDKTRTKLTAFALGATWAGMAGVFFAAKTT 319

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F F E+ I++ IV+LGGM S+  +     +LI + E    +  Y          
Sbjct: 320 FVNPASFTFLESAIILCIVVLGGMGSIVGVIVGALVLILLPEYLRAVADY---------- 369

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        L ++++ R   ++     S  + R
Sbjct: 370 -----RMLAFGAVLVVMMVFRPQGIVATVRRSYTVNR 401


>gi|241763745|ref|ZP_04761793.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
 gi|241367050|gb|EER61435.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
          Length = 358

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 84/319 (26%), Positives = 152/319 (47%), Gaps = 17/319 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---------- 88
              +    L+YVM A GL+IVVG  GLL L  V  YA+GAY + ++ S +          
Sbjct: 29  WVRIADLALLYVMLALGLNIVVGYAGLLDLGYVAFYAVGAYLFGLMASPHLTDTFTSFAS 88

Query: 89  ------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
                   S+W++IP++A+++   G ++G P+LK RGDYLAI TL   EI +  L     
Sbjct: 89  MFPDGLHTSLWVVIPLAALVAAVFGAVLGAPTLKLRGDYLAIVTLGFGEIIRIFLNNLDH 148

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
             N   G     ++  +      L +        +      YY+ L +  +S  I   L+
Sbjct: 149 PVNLTNGPKGIGQIDSVKIFGLDLGKRLELFGFDINSVTLYYYLFLLLVIVSIVICYRLQ 208

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            + I  AW  IR+++ A  ++       KL AF + ++F G++GA F A +  +SP+ F 
Sbjct: 209 DSRIGRAWMAIREDEIAAKAMGINTRNMKLLAFGMGASFGGVSGAMFGAFQGFVSPESFS 268

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
             E+++++++V+LGG+  +  +     +L  + E+   +      ++        +    
Sbjct: 269 LMESVMIVAMVVLGGIGHIPGVILGAVLLSALPEVLRYVAGP-LQAMTDGRLDSAILRQL 327

Query: 323 LMVIALFLVILMRSHSLLR 341
           L+ +A+ +++L+R   L  
Sbjct: 328 LIALAMIIIMLLRPRGLWP 346


>gi|121595558|ref|YP_987454.1| leucine/isoleucine/valine transporter permease subunit [Acidovorax
           sp. JS42]
 gi|222111779|ref|YP_002554043.1| leucine/isoleucine/valine transporter permease subunit [Acidovorax
           ebreus TPSY]
 gi|120607638|gb|ABM43378.1| L-valine ABC transporter membrane protein / L-leucine ABC
           transporter membrane protein / L-isoleucine ABC
           transporter membrane protein [Acidovorax sp. JS42]
 gi|221731223|gb|ACM34043.1| inner-membrane translocator [Acidovorax ebreus TPSY]
          Length = 413

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 98/341 (28%), Positives = 160/341 (46%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +++  L+        + +    +    +IYVM   GL+IVVG  GLL L  V  YA+GA
Sbjct: 87  VLIFVALMIAASWPFFAGRNAVDIATLAMIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGA 146

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L    G S W  +P++   +   G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 147 YTYALLFHWAGWSFWEALPLAGAAAALFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLLV 206

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
                T G  GI    +   LG  +          +  +FF    + +   I +Y + L 
Sbjct: 207 NLTDWTGGPDGISSIPKPSVLGLEMTRSPTVEGGTTFHQFFGMEFNSLHMVIALYLMALL 266

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  ++  I   L R  I  AW  +R+++ A  SL    +  KLSAF + + F G  GAFF
Sbjct: 267 LAVVTLFISNRLIRMPIGRAWEALREDEIACRSLGLNPMKIKLSAFTLGAMFAGFGGAFF 326

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  IL  + EL    + Y     
Sbjct: 327 AARQGIVNPESFTFIESALILAIVVLGGMGSQLGVIVAAIILTVLPELAREFSEY----- 381

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        +  + + L+++ R   LL ++     + 
Sbjct: 382 ----------RMLIFGLVMILMMVWRPQGLLPMKRHHVEVP 412


>gi|212702035|ref|ZP_03310163.1| hypothetical protein DESPIG_00037 [Desulfovibrio piger ATCC 29098]
 gi|212674550|gb|EEB35033.1| hypothetical protein DESPIG_00037 [Desulfovibrio piger ATCC 29098]
          Length = 411

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 98/318 (30%), Positives = 152/318 (47%), Gaps = 26/318 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            LL  +      S  Y  ++ I  ++YV+ A GL+I VG  G L L  V  YA+GAYSY 
Sbjct: 99  LLLAVMIAMPLVSSFYQTNIMISAMLYVILALGLNIAVGIAGQLVLGYVAFYAVGAYSYA 158

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +L   +GL  W  +PV   ++   G+ +G P L+ RGDYLAI TL   EI + +L+ W  
Sbjct: 159 LLNQAFGLGFWACLPVGGFMAIVFGLALGFPVLRLRGDYLAIVTLGFGEIVRLVLLNWTS 218

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  GI       F                      IF+YY++L    L+  +I  L+
Sbjct: 219 LTGGSGGIKNIPGPSFF-----------GQELEIAANTIFIYYLVLLAVILTIIVISRLK 267

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            + +  A + +R+++ A  ++   +   KLSAFA+SS + G AG  FAA    I+P  F 
Sbjct: 268 NSRVGLALQALREDEIACEAMGIDLARVKLSAFALSSCWAGFAGVIFAAKTTFINPASFT 327

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F E+ +++S+V+LGGM S+  +  A  ILI   E     + Y                  
Sbjct: 328 FMESAMILSMVVLGGMGSIVGVVIAATILILAPEYLRAFSEY---------------RML 372

Query: 323 LMVIALFLVILMRSHSLL 340
           L    + ++++ R   L+
Sbjct: 373 LFGAIMVIMMIFRPQGLV 390


>gi|301057691|ref|ZP_07198764.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
 gi|300448152|gb|EFK11844.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
          Length = 363

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 76/336 (22%), Positives = 145/336 (43%), Gaps = 17/336 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            N++        +V  ++    L       Y+  +   + IY + A GL+I+ G  G LS
Sbjct: 28  FNRFRTARGRRFMVITVICLFGLLPLVLNDYMLHLFHAVCIYAIVAVGLTIMTGYTGQLS 87

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L     + IGAY+   L +   L  +L+IP +  ++   G +  +PSL+ +  +L +ATL
Sbjct: 88  LAHGAFFGIGAYTAASLVTWASLPFFLVIPAAGTVATLFGALFAIPSLRLKPIFLPMATL 147

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I + IL+       G  G  +   +                    +  ++ ++YV 
Sbjct: 148 AGQFIVEYILVHRLSFAGGSKGFVMPKPV---------------LVDLGLETKLSLFYVT 192

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                +   +   L R+    A+R +R N++A  ++       KL AFAVSS   G+AGA
Sbjct: 193 AICLLIIIWLSDNLLRSKTGRAFRALRQNERAAAAMGIDAYRHKLFAFAVSSFLAGLAGA 252

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            FA + + I P  F  + +I  ++I+I+GG+ S+S     +  ++ + E+      +  N
Sbjct: 253 LFAYAVETIVPTFFNLTLSIEFLAIMIIGGLGSISGAIIGSVAIVFLKEIIGVAGAFSMN 312

Query: 308 SLL--KFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           S +      +    +  ++ + + L I+ +   L  
Sbjct: 313 SNIHAGAGPAIISLYEFVLGLVIVLFIIFKPEGLAS 348


>gi|328881684|emb|CCA54923.1| Branched-chain amino acid transport system permease protein LivM
           [Streptomyces venezuelae ATCC 10712]
          Length = 612

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 142/350 (40%), Gaps = 34/350 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L++            T++     ++G+ ILI+   A GL+IVVG  GLL L  V    +G
Sbjct: 268 LSIAGAFTAAALFPFTQTDDQYATLGVYILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 327

Query: 78  AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           AY+  ++           L  W  I V A  S   G+++G P+L+ RGDYLAI TL   E
Sbjct: 328 AYAAALVSGAPSSPFGVHLPFWAAILVGAGASLVFGVLIGAPTLRLRGDYLAIVTLGFGE 387

Query: 132 IFQNILIK-----WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           IF+  ++         +TNG  GI     L   G    +      F         F+  +
Sbjct: 388 IFRIAVMNTDGTSGPDVTNGSNGIASIPNLSIFGFDFGAEHTIAGFTIGRFANYFFLMLL 447

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           ++ +      +      + I  AW  IR+++ A  ++       KL AFA+ ++  G+AG
Sbjct: 448 IMAVV---VLVFRRSGDSRIGRAWVAIREDETAALAMGINGFRVKLIAFALGASLAGLAG 504

Query: 247 AFFAASRDRISPDMFKFSENI-----IVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
              A     ++P+ + F+  I      +++ V+LGGM ++S      ++L  +      M
Sbjct: 505 TVQAHVTYTVTPEQYLFAGPIPPNSAFLLAAVVLGGMGTMSGPLVGASLLFLIPNKLQFM 564

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             Y                     +AL L++  R   ++  R        
Sbjct: 565 GEY---------------QLLAFGVALILLMRFRPEGMIANRRNQLEFHE 599


>gi|39933743|ref|NP_946019.1| ABC transporter ATP-binding protein [Rhodopseudomonas palustris
           CGA009]
 gi|39647590|emb|CAE26110.1| putative ABC transporter subunit, membrane spanning domain +
           ATP-binding component [Rhodopseudomonas palustris
           CGA009]
          Length = 595

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 59/329 (17%), Positives = 112/329 (34%), Gaps = 19/329 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++     LL  L      +  Y   +  +I+I   F   L +++G  GL+S      +
Sbjct: 7   LVVVLFFTLLLGCLLALPFVAGPYPVKLMTRIVIIATFVLSLDLLIGVTGLVSFGHAAFF 66

Query: 75  AIGAYSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             GAY+   +       ++ + +    +  G   +++G  +   RG Y  + TL   ++ 
Sbjct: 67  GCGAYAVYFVSPEAEAANVIVALGAGLLAGGLAALVVGAFATLTRGFYFIMVTLAAGQML 126

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +                              +                YYV + +   
Sbjct: 127 FALFHDTDIAKGSDGAYINVKP----------ELTLAGLTLLDFSDRRQFYYVCVVVLIA 176

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  ++L L R+      + IR N+    SL       KL+AF ++    G+AGA FA+  
Sbjct: 177 AYGLLLALVRSPFGRVLQGIRANEVRMSSLGYDTYRYKLAAFTIAGMVAGLAGALFASID 236

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             ++PD+  + ++ + I +V+LGG  +L            + EL          +     
Sbjct: 237 GFVTPDLLNWHQSGLAIMMVVLGGAGTLFGPILGALAYSSLEELL--------KTASIVG 288

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         L   +LM    L  L
Sbjct: 289 SFVADHWRLGTGATLIAAVLMSPDGLAGL 317


>gi|157147157|ref|YP_001454476.1| hypothetical protein CKO_02934 [Citrobacter koseri ATCC BAA-895]
 gi|157084362|gb|ABV14040.1| hypothetical protein CKO_02934 [Citrobacter koseri ATCC BAA-895]
          Length = 368

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 89/342 (26%), Positives = 152/342 (44%), Gaps = 17/342 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
                LL+   + +     Y   +    L+Y+M A GL+IVVG  GLL +  +  YA+GA
Sbjct: 21  LFCIALLIAPVVASQLGGNYWVRVIDFALLYIMLALGLNIVVGYTGLLDMGFIAFYAVGA 80

Query: 79  YSYVILGSRYGLSIWLLIPVSA----------------MISGACGMIMGLPSLKFRGDYL 122
           Y   +L S +   ++ ++ V                  +++  CG+++G P+LK RGDYL
Sbjct: 81  YLAALLASPHLSEVFPILAVWFPDGLHTSYLLIVPAAALVAAVCGILLGAPTLKLRGDYL 140

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           AI TL   EI + ++       N   G      +  L          + +    V     
Sbjct: 141 AIVTLGFGEIIRILMRNLDRPVNITNGAKGITGVDTLNLFGLKFSGVYHWLGFKVPALWL 200

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            YY+L+ +      + L L+ + I  AW  IR+++    ++   +   KL AFA+ ++F 
Sbjct: 201 WYYLLMLVIVAIIFVCLRLQHSRIGRAWHAIREDEDVARAMGINVRNYKLLAFAMGASFG 260

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+AGA F A +  +SP+ F   E+I V+++V+LGGM  +  +     +L  + EL     
Sbjct: 261 GVAGALFGAFQGFVSPESFTLQESIAVLAMVVLGGMGHIPGVILGAVLLTALPELLRSQA 320

Query: 303 FYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                 L         +       +AL LV+L+R   +  +R
Sbjct: 321 APVQQMLFGTVLIDPEILRQLFYGLALVLVMLVRPSGIWPVR 362


>gi|2190588|gb|AAC13364.1| putative ABC transporter subunit [Rhodopseudomonas palustris]
          Length = 595

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 59/329 (17%), Positives = 112/329 (34%), Gaps = 19/329 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++     LL  L      +  Y   +  +I+I   F   L +++G  GL+S      +
Sbjct: 7   LVVVLFFTLLLGCLLALPFVAGPYPVKLMTRIVIIATFVLSLDLLIGVTGLVSFGHAAFF 66

Query: 75  AIGAYSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             GAY+   +       ++ + +    +  G   +++G  +   RG Y  + TL   ++ 
Sbjct: 67  GCGAYAVYFVSPEAEAANVIVALGAGLLAGGLAALVVGAFATLTRGFYFIMVTLAAGQML 126

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +                              +                YYV + +   
Sbjct: 127 FALFHDTDIAKGSDGAYINVKP----------ELTLAGLTLLDFSDRRQFYYVCVVVLIA 176

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  ++L L R+      + IR N+    SL       KL+AF ++    G+AGA FA+  
Sbjct: 177 AYGLLLALVRSPFGRVLQGIRANEVRMSSLGYDTYRYKLAAFTIAGMVAGLAGALFASID 236

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             ++PD+  ++ + + I +V+LGG  +L            + EL          +     
Sbjct: 237 GFVTPDLLNWNPSGLAIMMVVLGGAGTLFGPILGALAYSSLEELL--------KTASIVG 288

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         L   +LM    L  L
Sbjct: 289 SFVADHWRLGTGATLIAAVLMSPDGLAGL 317


>gi|303327496|ref|ZP_07357937.1| high-affinity branched-chain amino acid transport protein
           [Desulfovibrio sp. 3_1_syn3]
 gi|302862436|gb|EFL85369.1| high-affinity branched-chain amino acid transport protein
           [Desulfovibrio sp. 3_1_syn3]
          Length = 406

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 98/325 (30%), Positives = 155/325 (47%), Gaps = 26/325 (8%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L LF+ +    S  Y  ++ I  L+YVM A GL+IVVG  G L L  V  YA+GAY+
Sbjct: 92  LVVLALFMLVMPLVSSFYQTNIMISALLYVMLALGLNIVVGLAGQLVLGYVAFYAVGAYA 151

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L   +G   W  +PV  +++   G+ +G P L+ RGDYLAI TL   EI +  L  W
Sbjct: 152 YGLLYQFFGWGFWACLPVGGVMAVLFGLALGFPVLRLRGDYLAIVTLGFGEIVRLGLQNW 211

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G  GI    R  F                       ++YY++L    ++  +I  
Sbjct: 212 TSLTGGPRGISEIPRPGFF-----------GMEMDINTSTTYVYYLVLAAVVITIIVISR 260

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L+ + +  A + +R+++ A  ++   I   KLSAFA+ S + G AG  FAA    I+P  
Sbjct: 261 LKNSRVGLALQALREDEIAGEAMGIDITRVKLSAFALGSCWAGFAGVIFAAKTTYINPSS 320

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F F E+ +++S+V+LGGM S++ +A A  ILI   E     + Y                
Sbjct: 321 FTFMESAMILSMVVLGGMGSIAGVAIAAMILILAPEYLRAFSEY---------------R 365

Query: 321 TTLMVIALFLVILMRSHSLLRLRTP 345
             +    + ++++ R   L+     
Sbjct: 366 MLIFGAIMVIMMIFRPQGLISGERR 390


>gi|261339882|ref|ZP_05967740.1| high-affinity branched-chain amino acid transport protein
           [Enterobacter cancerogenus ATCC 35316]
 gi|288317792|gb|EFC56730.1| high-affinity branched-chain amino acid transport protein
           [Enterobacter cancerogenus ATCC 35316]
          Length = 350

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 95/342 (27%), Positives = 155/342 (45%), Gaps = 17/342 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
                LLL   +       Y   +    L+Y+M A GL+IVVG  GLL +  +  YA+GA
Sbjct: 3   LFCLALLLAPVVATQLGGNYWVRVIDFALLYIMLALGLNIVVGYTGLLDMGFIAFYAVGA 62

Query: 79  YSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           Y   +L S +                  S  L+IPV+A+++  CG+++G P+LK RGDYL
Sbjct: 63  YLAALLASPHLLEVFPILAVWFPDGLHTSYLLIIPVAALVAAVCGIVLGAPTLKLRGDYL 122

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           AI TL   EI + ++       N   G      +  L          + +    V     
Sbjct: 123 AIVTLGFGEIIRILMRNLDRPVNITNGAKGITGVDTLNLFGLKFSGVYHWFGVKVPALWL 182

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            YY+L+ +      + L L+ + I  AW  IR+++    ++   +   KL AFA+ ++F 
Sbjct: 183 WYYLLMLVIVGIIFVCLRLQHSRIGRAWHAIREDEDVARAMGINVRNYKLLAFAMGASFG 242

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+AGA F A +  +SP+ F   E+I V+++V+LGGM  +  +     +L  + EL     
Sbjct: 243 GVAGALFGAFQGFVSPESFTLQESIAVLAMVVLGGMGHIPGVILGAVLLTALPELLRSQA 302

Query: 303 FYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                +L         +       +AL LV+L+R   +  +R
Sbjct: 303 APVQQALFGTVLIDPEVLRQLFYGLALVLVMLVRPSGIWPVR 344


>gi|167770134|ref|ZP_02442187.1| hypothetical protein ANACOL_01477 [Anaerotruncus colihominis DSM
           17241]
 gi|167667456|gb|EDS11586.1| hypothetical protein ANACOL_01477 [Anaerotruncus colihominis DSM
           17241]
          Length = 355

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 81/308 (26%), Positives = 138/308 (44%), Gaps = 28/308 (9%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            +Y+  + I I IY M A GL+++ G  G +SL     +AIGAY   ++    G S  + 
Sbjct: 50  SQYLIRIFIMIGIYSMLALGLNLLTGYTGQVSLGHAGFFAIGAYVSSLMSINLGCSFIIS 109

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
               A+I+  CG ++GLP+++  G YL I TL   EI + +L+ W  +TNG  G+    +
Sbjct: 110 FIAGALITALCGFLLGLPTMRLSGSYLTIVTLGFGEIVKMVLLNWTDVTNGPMGLKNIPK 169

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
               G  +        +    ++  + +  V+L              R+    A+  I+D
Sbjct: 170 PNLFGMDLTLANSGLYYLMLLLVLLVSVVCVVLI-------------RSKTGRAFIAIKD 216

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A   +       K+ +FA S+   G+AGAF+A     I P+ F F  + ++ISIVIL
Sbjct: 217 DELAATMMGIRTSRFKILSFAFSAGIAGLAGAFYAPVISFIDPNTFVFDVSTLIISIVIL 276

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM ++  +    AILI   E+   +                     +  + L +++  R
Sbjct: 277 GGMGTMRGMYLGAAILIAFPEVARFLMD---------------WRFVVYGLVLVVMMRFR 321

Query: 336 SHSLLRLR 343
              LL  +
Sbjct: 322 PQGLLGWK 329


>gi|90422534|ref|YP_530904.1| ABC transporter related [Rhodopseudomonas palustris BisB18]
 gi|90104548|gb|ABD86585.1| ABC transporter related [Rhodopseudomonas palustris BisB18]
          Length = 594

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 60/326 (18%), Positives = 113/326 (34%), Gaps = 17/326 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++     LL  L      +  Y   +  +I+I   F   L +++G  GL+S      +  
Sbjct: 9   VIVFFALLLTCLVALPFFTGPYPVKLMTRIVILATFVLSLDLLIGVTGLVSFGHAAFFGC 68

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+   +      +  L+   + +++G     +          +  I   + +      
Sbjct: 69  GAYAVYFVSPESEAANVLVALGAGLLAGGLVAFIVGAFATLTRGFYFIMVTLAAGQMLFA 128

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           L     I NG  G             V+  +    F           YY+ L +   +  
Sbjct: 129 LFHDTDIANGSDG---------AYINVKPDLTILGFGLLDFSDRRQFYYICLAVLVGAYC 179

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++  L R+      + IR N+    SL       KL+AF ++    G+AGA FA+    +
Sbjct: 180 LLFALVRSPFGRVLQGIRANEVRMSSLGYNAYRYKLAAFTLAGMLAGLAGALFASIDGFV 239

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +PD+  + ++ + I +V+LGG  +L            + EL          +        
Sbjct: 240 TPDLLNWHQSGLAIMMVVLGGAGTLFGPILGALAYASLEELL--------KTASIVGPFV 291

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
                     +L + +LM    L  L
Sbjct: 292 ADHWRLGTGASLIVAVLMSPDGLAGL 317


>gi|262041877|ref|ZP_06015061.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259040782|gb|EEW41869.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 428

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 100/339 (29%), Positives = 161/339 (47%), Gaps = 22/339 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L+    +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 101 IIPLLVGLAIVFPFLATKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 160

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P+ A+++   G ++G P L+  GDYLAI TL   EI + +L  
Sbjct: 161 GLALGYQYLGLGFWAMLPLGAVMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 220

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V     F     R        +  FF    +  +  IF+Y VL  +  
Sbjct: 221 WVSFTGGPNGVPVPSPTLFGLEFTRRAKDGGIPIHEFFHVSYNPNLKFIFLYAVLCLVVM 280

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   +   L R  I  AW  +R+++ A  ++    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 281 LVLLVKHRLTRMPIGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGIAGVFFASY 340

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL  G + Y        
Sbjct: 341 QGFVNPTSFTFFESALILAIVVLGGMGSTLGVVLAAFVLTVTPELLRGFDEY-------- 392

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                     L  + + ++++ R   L+R       L +
Sbjct: 393 -------RVLLFGVLMVMMMIWRQRGLVRTSRSGVALRK 424


>gi|212711024|ref|ZP_03319152.1| hypothetical protein PROVALCAL_02093 [Providencia alcalifaciens DSM
           30120]
 gi|212686192|gb|EEB45720.1| hypothetical protein PROVALCAL_02093 [Providencia alcalifaciens DSM
           30120]
          Length = 422

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 103/328 (31%), Positives = 158/328 (48%), Gaps = 23/328 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    LIYVM   GL++VVG  GLL L     YAIGAY++ +L   Y  
Sbjct: 103 WPFMVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYAGFYAIGAYTFGLLNHYYDF 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ + +   G+++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWESLPIAGLTAALAGLLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTDITGGPNGI 222

Query: 151 YVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
               +  F G            +   FF    +     IF+Y+V L +  L+  +I  L 
Sbjct: 223 SQLPKPTFFGLEFSRTAKDGWDTFHHFFGLDYNPGDRIIFLYFVALLLVVLTLIVISRLL 282

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R  +  AW  +R+++ A  SL  +    KL+AF +S+ F G AGA FAA +  ISP+ F 
Sbjct: 283 RMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISATFAGFAGALFAARQGFISPESFT 342

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F+E+  V++IV+LGGM S   +  A  IL+   E+   +N Y                  
Sbjct: 343 FAESAFVLAIVVLGGMGSQMSVILAAIILVVSREMMRDLNEY---------------SML 387

Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLE 350
           L+   + L+++ R   LL ++     L+
Sbjct: 388 LLGALMVLMMIWRPQGLLPMQRRQMKLK 415


>gi|192289163|ref|YP_001989768.1| ABC transporter [Rhodopseudomonas palustris TIE-1]
 gi|192282912|gb|ACE99292.1| ABC transporter related [Rhodopseudomonas palustris TIE-1]
          Length = 597

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 59/329 (17%), Positives = 112/329 (34%), Gaps = 19/329 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++     LL  L      +  Y   +  +I+I   F   L +++G  GL+S      +
Sbjct: 9   LVVVLFFTLLLGCLLALPFVAGPYPVKLMTRIVIIATFVLSLDLLIGVTGLVSFGHAAFF 68

Query: 75  AIGAYSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             GAY+   +       ++ + +    +  G   +++G  +   RG Y  + TL   ++ 
Sbjct: 69  GCGAYAVYFVSPEAEAANVIVALGAGLLAGGLAALVVGAFATLTRGFYFIMVTLAAGQML 128

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +                              +                YYV + +   
Sbjct: 129 FALFHDTDIAKGSDGAYINVKP----------ELTLAGLTLLDFSDRRQFYYVCVVVLIA 178

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  ++L L R+      + IR N+    SL       KL+AF ++    G+AGA FA+  
Sbjct: 179 AYGLLLALVRSPFGRVLQGIRANEVRMSSLGYDTYRYKLAAFTIAGMVAGLAGALFASID 238

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             ++PD+  + ++ + I +V+LGG  +L            + EL          +     
Sbjct: 239 GFVTPDLLNWHQSGLAIMMVVLGGAGTLFGPILGALAYSSLEELL--------KTASIVG 290

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         L   +LM    L  L
Sbjct: 291 SFVADHWRLGTGATLIAAVLMSPDGLAGL 319


>gi|319763836|ref|YP_004127773.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|330823900|ref|YP_004387203.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317118397|gb|ADV00886.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|329309272|gb|AEB83687.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 419

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 97/341 (28%), Positives = 158/341 (46%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +   LL   +    + +    +    +IYVM   GL++VVG  GLL L  V  YA+GA
Sbjct: 94  VWITAALLLAVIWPFFAGRNAVDIATLAMIYVMLGLGLNVVVGFAGLLDLGFVGFYAVGA 153

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L    G S W  +P++   S   G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 154 YTYALLFHWAGWSFWEALPLAGAASALFGFVLGFPVLRLRGDYLAIVTLGFGEIIRLLLV 213

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
                T G  GI    +    G  +          +  +FF    + +   IF+Y + L 
Sbjct: 214 NLTDFTGGPDGISGLPKPSMFGLEMTRSPSAEGATTFHQFFGLEFNSMHMVIFLYLMALL 273

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  ++  I   L R  I  AW  +R+++ A  SL    +  KLSAF + + F G  GAFF
Sbjct: 274 LAVVTLFISNRLIRMPIGRAWEALREDEIACRSLGLNPMKIKLSAFTLGAMFAGFGGAFF 333

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           AA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E       Y     
Sbjct: 334 AARQGIVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEFAREFAEY----- 388

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        +  + + L+++ R   LL ++     ++
Sbjct: 389 ----------RMLIFGLVMILMMVWRPQGLLPMQRHHVEVK 419


>gi|322833434|ref|YP_004213461.1| inner-membrane translocator [Rahnella sp. Y9602]
 gi|321168635|gb|ADW74334.1| inner-membrane translocator [Rahnella sp. Y9602]
          Length = 429

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 100/339 (29%), Positives = 160/339 (47%), Gaps = 22/339 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+  L++        + KYI ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 102 VIPLLIVLAIFFPFVATKYILTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 161

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+++   G ++G P L+  GDYLAI TL   EI + +L  
Sbjct: 162 GLALGYQYLGLGFWSMLPLAAVMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLTN 221

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+      +F     R           FF    +  +  IF+Y VL+ +  
Sbjct: 222 WLSFTGGPNGVSAPPPTFFGLEFGRRAKEGGVPFHEFFHLTYNPNMKFIFIYAVLVLVVL 281

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   I   L R  I  AW  +R+++ A  ++    +  KLSAF + ++  G+AG FFA  
Sbjct: 282 LVLFIKHRLTRMPIGRAWEALREDEIACRAMGLNHVLVKLSAFTLGASTAGIAGVFFATY 341

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL      Y        
Sbjct: 342 QGFVNPTSFTFFESALILAIVVLGGMGSTIGVVLAAFVLTVAPELLRSFAEY-------- 393

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                     L  + + ++++ R   L+R+      + +
Sbjct: 394 -------RVLLFGVLMVVMMIWRPRGLIRISRSGFAVRK 425


>gi|296268395|ref|YP_003651027.1| inner-membrane translocator [Thermobispora bispora DSM 43833]
 gi|296091182|gb|ADG87134.1| inner-membrane translocator [Thermobispora bispora DSM 43833]
          Length = 327

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 83/315 (26%), Positives = 140/315 (44%), Gaps = 36/315 (11%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +  Y  S+     I+VM A GL+IVVG  GLL L     +A+GAY+  +L +R+ L
Sbjct: 45  PFVIATPYALSVMTSAAIFVMLAAGLNIVVGYCGLLDLGYAAFFAVGAYTSGVLSTRFDL 104

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   +P   +++   G+++G P+L+ R DYLAI TL   EI +      + IT G +GI
Sbjct: 105 PLLATLPAVIVVTIIAGIVIGAPTLRLRSDYLAIVTLGFGEIIRITANNLE-ITGGPSGI 163

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
           Y    L                        +  YY+ + +  ++ +    L R+ +  AW
Sbjct: 164 YGIPGLTD--------------------NAVVFYYLTVVVVAVAVAGAARLGRSRLGRAW 203

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R IR+++ A  ++       KL+A+   + + G+AG  FAA    ISP  F F ++ +V+
Sbjct: 204 RFIREDEDAAEAMGVHTYRVKLAAYIAGAIWGGLAGVLFAAHLSAISPGSFTFLQSALVL 263

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
             V+LGGM S   +     ++  + E+      Y                     + L +
Sbjct: 264 MAVVLGGMGSTPGVVLGAIVISLLPEVLRDFADY---------------RYFAFGVLLII 308

Query: 331 VILMRSHSLLRLRTP 345
            +L+R   L   R+ 
Sbjct: 309 FMLVRPQGLWPHRSR 323


>gi|271967281|ref|YP_003341477.1| branched-chain amino acid transporter permease [Streptosporangium
           roseum DSM 43021]
 gi|270510456|gb|ACZ88734.1| branched-chain amino acid transport system permease protein
           [Streptosporangium roseum DSM 43021]
          Length = 321

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 88/325 (27%), Positives = 148/325 (45%), Gaps = 36/325 (11%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A +  LL+ L      +  Y  S+     I+VM A GL+IVVG  GLL L  V  +A+GA
Sbjct: 28  AGIAGLLIALLAPFVNASGYALSVMTSAAIFVMLAAGLNIVVGYCGLLDLGYVAFFAVGA 87

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L +R+ L + + +P   +++   G+++G P+L+ R DYLAI TL   EI +    
Sbjct: 88  YTSGVLSTRFDLPLLVTVPAVIVVTVIAGIVIGAPTLRLRSDYLAIVTLGFGEIIRITAN 147

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +T G +GIY    L                        +  YYV + +  L+    
Sbjct: 148 NL-DVTGGPSGIYGIPHLTD--------------------SPVVFYYVTVVVVSLAVLGA 186

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+ +  AWR +R+++ A  ++       KL+A+   + + G+AG  FAA    ISP
Sbjct: 187 ARLGRSRLGRAWRFVREDEDAAEAMGVHTYRVKLAAYIAGAVWGGLAGVLFAAQLSAISP 246

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F F ++ +V+  V+LGGM S+  +     ++  + E+   +  Y              
Sbjct: 247 TSFTFLQSALVLMAVVLGGMGSIPGVVIGAVVISILPEILRDLADY-------------- 292

Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343
               +  + L  V+++R   L   R
Sbjct: 293 -RFFIFGVLLIAVMILRPQGLWPAR 316


>gi|146312139|ref|YP_001177213.1| inner-membrane translocator [Enterobacter sp. 638]
 gi|145319015|gb|ABP61162.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Enterobacter sp. 638]
          Length = 429

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 101/339 (29%), Positives = 160/339 (47%), Gaps = 22/339 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  +L         + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 102 IIPLVLTLAVCFPFIATKYVLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 161

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+++ A G ++G P L+  GDYLAI TL   EI + IL  
Sbjct: 162 GLALGYQYLGLGFWTMLPLAALMAAAAGALLGFPVLRMHGDYLAIVTLGFGEIIRLILNN 221

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+      +F     R           FF    +  +  IF+Y VLL +  
Sbjct: 222 WLTFTGGPNGVSAPPPTFFGLEFGRRAKEGGVPFHEFFHLTYNPNLKFIFIYVVLLLVVL 281

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   +   L R  I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA  
Sbjct: 282 LVLYVKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGIAGVFFATY 341

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL      Y        
Sbjct: 342 QGFVNPTSFTFFESALILAIVVLGGMGSTVGVVLAAFVLTVTPELLRSFAEY-------- 393

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                     L  + + ++++ R   L+R+      + +
Sbjct: 394 -------RVLLFGMLMVVMMIWRPRGLIRINRSGFAVRK 425


>gi|237653138|ref|YP_002889452.1| branched-chain amino acid ABC transporter permease [Thauera sp.
           MZ1T]
 gi|237624385|gb|ACR01075.1| inner-membrane translocator [Thauera sp. MZ1T]
          Length = 373

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 93/331 (28%), Positives = 160/331 (48%), Gaps = 5/331 (1%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  + +     A +  +    +    L+Y+M A GL++VVG  GLL L  +  YA+GAY
Sbjct: 22  LIILVAIAAPFIAWQFGRSWVRILDFALLYMMLALGLNLVVGFAGLLDLGYIAFYAVGAY 81

Query: 80  SYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           ++  L S +    L  W+++P+ A  +   G+++G P L+ RGDYLAI TL   EI +  
Sbjct: 82  TFAFLASPHFDVHLPFWVILPLGAAFAALAGVMLGFPVLRLRGDYLAIVTLGFGEIVRIF 141

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY-VLLGMCFLSA 195
           ++      N   G    + +  +      L R  R    F I+ +F+YY   L     S 
Sbjct: 142 MLNLNYPVNITNGPQGINMIDPINLFGWDLSRNIRIGEDFTIHSLFLYYYFFLAAVVASI 201

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             I  L+ + I  AW  +RD++ A  ++       KL AFA+ + F G+AGA F A +  
Sbjct: 202 IFIQRLQISRIGRAWAAMRDDELAAKAIGINTRDMKLLAFALGATFGGVAGALFGAFQGF 261

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-FDC 314
           +SP+ F   E+I V+++V+ GGM +L+       +L  + EL   +      +L      
Sbjct: 262 VSPESFSLMESIAVLTMVVFGGMGNLAGAVVGAFVLALLPELLRDVAVPLQQTLFGHVLL 321

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
              +    L+ +A+ L++L+R   ++  R  
Sbjct: 322 DPEVLRMLLLSLAMILMMLLRPAGMIPARAR 352


>gi|315186616|gb|EFU20375.1| inner-membrane translocator [Spirochaeta thermophila DSM 6578]
          Length = 331

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 74/338 (21%), Positives = 144/338 (42%), Gaps = 31/338 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +L  L++     +   + +  +  Y   +     I V+ A GL+++ G  G L++ 
Sbjct: 6   RDGLVLAGLSIGVVAAVTALVRSGFTTLYTAQVITLSGINVIVALGLNLITGFTGQLAIG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+GAY+  +     G    L +    +++   GM++G P+ + RGDYLAI TL  
Sbjct: 66  HAGFMAVGAYTSALTMMLLGFPPVLGVISGGLLAAVVGMLIGFPTFRLRGDYLAIVTLAF 125

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            E+ + I+I    +T G AG+                     F    ++ +I    V+L 
Sbjct: 126 GEVIRVIIINLPSLTGGAAGLKGVPP----------------FAEGRMLKQIVAMDVVLV 169

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
             FL  +++  + R++   A   IRD++ A  ++   +   K+ +F +S+   G+ G  +
Sbjct: 170 FMFLVIALMYTVVRSSYGRALIAIRDDEIAAHTMGIDVFGYKMFSFTLSAFIAGLGGGLY 229

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A     ++P  F F +++ ++ IV+ GGM S++    A  +L  + E    +  Y     
Sbjct: 230 APFFGYLTPQTFTFLKSVEILIIVVFGGMGSITGTVVAGFLLTSLQEFLRFLKDY----- 284

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                        +  + L +++L R   L   R  S 
Sbjct: 285 ----------RMVIYPLILIVMMLFRPQGLFGEREISI 312


>gi|312114588|ref|YP_004012184.1| ABC transporter [Rhodomicrobium vannielii ATCC 17100]
 gi|311219717|gb|ADP71085.1| ABC transporter related protein [Rhodomicrobium vannielii ATCC
           17100]
          Length = 597

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/311 (17%), Positives = 108/311 (34%), Gaps = 19/311 (6%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-YGL 90
                 Y      +++I  +F   L   +G  GL+S      + +GAY+   + S     
Sbjct: 24  PFFVGPYGIKFATRLIILSIFVVSLDFALGLAGLISFGHAAFFGVGAYAVYFVSSDEGAA 83

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           ++++ +     +   C +++G  +   RG Y  + TL   ++  ++              
Sbjct: 84  NVFVALGAGVGVGAVCALVIGAFACLTRGFYFIMVTLAAGQMMFSLFHDTDIAKGADGAY 143

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                           +                +YV L +   +   +  L RT      
Sbjct: 144 INIKP----------DLTILGHTLIDFDDRRVFFYVCLALLVFTVVALYMLARTPFGRVV 193

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           + ++ N+    +L       KL+AF VS AF G+AGA FA     ++PD+F + ++ + I
Sbjct: 194 QGLKSNETRLSALGFDAYRFKLAAFVVSGAFAGLAGALFACIDGFVTPDLFSWHQSGLAI 253

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            +V+LGG  +L          + + E     +              +          L +
Sbjct: 254 MMVVLGGAGTLFGPILGALFYVSLEETLKTASL--------VGDFVSSHWLLGTGAVLVI 305

Query: 331 VILMRSHSLLR 341
            +L+    L  
Sbjct: 306 AVLLSPDGLAG 316


>gi|296532436|ref|ZP_06895161.1| ABC superfamily ATP binding cassette transporter
           ATP-binding/permease [Roseomonas cervicalis ATCC 49957]
 gi|296267232|gb|EFH13132.1| ABC superfamily ATP binding cassette transporter
           ATP-binding/permease [Roseomonas cervicalis ATCC 49957]
          Length = 835

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/300 (18%), Positives = 105/300 (35%), Gaps = 34/300 (11%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL-SIWLLIPVSAM 101
              ++I+ + A GL+I+VG  GL+S      + IGAY+  I+   +    + L +    +
Sbjct: 32  ATDVVIFAIAAMGLNILVGHTGLVSFGHGAWFGIGAYAAGIIQRHFFPGDMLLPMLFGMV 91

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
                  I+GL  L+ RG Y ++ TL M+ +   I  +W  +T G+ G     R      
Sbjct: 92  FVLGFAAIVGLLILRRRGVYFSLLTLAMTAMLFTIAFRWTELTGGEDGFGGITR------ 145

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                        +F+      Y  +  + F     +       +      IR+N++   
Sbjct: 146 ------------YAFLDSSSAYYTAVAVIGFGMVYALWRFHHAPVGTVLVAIRENEQRAR 193

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
            +       KL AF +S+    +AG   A +    S +    + +  ++++V++GGM   
Sbjct: 194 FVGYDTTRYKLLAFTLSAGVTALAGMLSAYNHRFASAEPIAIAFSGELLAMVVIGGMRGF 253

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              A      I   E                             +     I+     L+ 
Sbjct: 254 LGPALGALFYILFREFLSIY---------------TANWLLFFGLLFVGFIVFSPDGLVG 298


>gi|256394819|ref|YP_003116383.1| inner-membrane translocator [Catenulispora acidiphila DSM 44928]
 gi|256361045|gb|ACU74542.1| inner-membrane translocator [Catenulispora acidiphila DSM 44928]
          Length = 477

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 85/353 (24%), Positives = 149/353 (42%), Gaps = 24/353 (6%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + K   LLAVV   ++   +G      +   +  Q+ +YV+ A GL++VVG  GLL L  
Sbjct: 113 WVKRGTLLAVVVIAIMLPTMGLFTLPYFQSVLSDQVGVYVLAAVGLNVVVGWAGLLDLGY 172

Query: 71  VIAYAIGAYSYVILGSRY--------------GLSIWLLIPVSAMISGACGMIMGLPSLK 116
           +  +AIGAY+  IL  R                L+++   P++ +++ A G+I+G P+L+
Sbjct: 173 IAFFAIGAYTTAILSGRLPIGADGNPEAHPPIHLNLFFAFPIAVLLTMAAGLILGAPTLR 232

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
            RGDYLAI TL   EI  NI         G A    +   +                   
Sbjct: 233 LRGDYLAIVTLGFHEIVLNIARNNPKNITGGALGATSIPTFRFNLFGIHYDWN------- 285

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
                  +Y+ +G+  +       L  + +   W  IR+++ A  +     +  KL AFA
Sbjct: 286 TSDSKPYWYLAIGLIIVVVFAFRRLEHSKVGRTWTAIREDEVAAAASGVPTVKYKLMAFA 345

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           + ++  G AG    A    I+PD F    +I +++ VI GGM SL+ +    +++  +  
Sbjct: 346 IGASTSGFAGVLATAKITAITPDNFPLPLSIYILAYVIFGGMGSLTGVIVGASLMTFLPY 405

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
              G   ++       D          +   L ++++ R   L+  +  +  L
Sbjct: 406 FLQGPPSWFNGGHPVVDPKDIPMW---VGAVLLVMMIFRPQGLIPSKRRAQEL 455


>gi|302533852|ref|ZP_07286194.1| branched chain amino acid transport permease [Streptomyces sp. C]
 gi|302442747|gb|EFL14563.1| branched chain amino acid transport permease [Streptomyces sp. C]
          Length = 607

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 80/347 (23%), Positives = 149/347 (42%), Gaps = 28/347 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A+V   +  +    T++     ++G+ ILI+   A GL+IVVG  GLL L  V    +G
Sbjct: 263 VALVGAFVAAMAFPLTQTDDQYATVGVNILIFATVALGLNIVVGLTGLLDLGYVAFLGVG 322

Query: 78  AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           AY+  ++           L  W  I + A+ S   G+++G P+L+ RGDYLAI TL   E
Sbjct: 323 AYTAALVSGAPNSPFGVHLPFWAAILIGAIASMVFGVLIGAPTLRLRGDYLAIVTLGFGE 382

Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           IF+  +  +  ++      G      +  +                 +      + +LL 
Sbjct: 383 IFRITMNNFDGVSGPNVTNGSKGISNIPNVNLFGFDFGASHTIAGFTIGRFANYFLLLLL 442

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  +   +      + I  AW  IR+++ A  ++       KL AFA+ +   G+AGA  
Sbjct: 443 VTLIVVMVFRRSAESRIGRAWVAIREDETAAEAMGINGFRVKLIAFALGATLAGLAGAVQ 502

Query: 250 AASRDRISPDMFKFSENI-----IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A  +  ++PD ++F+ ++      +++ V+LGGM ++S      ++L  +      +  Y
Sbjct: 503 AHVQYTVTPDQYQFANSLPPNSAFLLAAVVLGGMGTISGPLVGGSLLFLIPNKLQFLGDY 562

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                             +  IAL +++ +R   L+  R     L +
Sbjct: 563 ---------------QLLVFGIALVILMRLRPEGLIPNRRNQLELHK 594


>gi|298241436|ref|ZP_06965243.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963]
 gi|297554490|gb|EFH88354.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963]
          Length = 661

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 160/362 (44%), Gaps = 36/362 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y  ++   A+ YP+L  L  G     +   +       YV+ A GL+IVVG  GLL L  
Sbjct: 283 YMVLIVAFALFYPVLDPLLFGYGTDGR--LAAYGDAGYYVILALGLNIVVGFAGLLDLGY 340

Query: 71  VIAYAIGAYSYVILG--------------SRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
           V  +AIG+Y +   G              + +    W ++ V+A+I+   G+I+G P+L+
Sbjct: 341 VAFFAIGSYVWGFFGSSQFQIVTGITIAPTTWAWLFWPMVIVAALIAALWGVILGAPTLR 400

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
            RGDYLAI TL   EI   I  +    TNG  GI       F G +  S           
Sbjct: 401 LRGDYLAIVTLGFGEIVPVIFKELDKYTNGINGIVGVYSPAFPGVSWTS----------- 449

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
            I     YY++L +  L     L LR + +  AW  IR+++ A  S    ++  KL AF 
Sbjct: 450 -ITAGPYYYLILALIALCVFANLRLRDSRLGRAWIAIREDEIAASSSGINLVNTKLLAFG 508

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA------- 289
             + F G+AGA+ AA    +SPD F FS++II +++V++GG+ S+  +            
Sbjct: 509 AGAFFSGIAGAYHAAKLGTVSPDNFNFSDSIIYLAMVVIGGLGSIPGVVVGAIAVYAINL 568

Query: 290 -ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
            IL  +  L    N          + +F+     +  + L L+++ R   L+        
Sbjct: 569 QILGQLDTLAADPNNILHVFKTLPNFAFSNIRGLIFGVILVLIVIYRPEGLIPSARRRRE 628

Query: 349 LE 350
           L 
Sbjct: 629 LH 630


>gi|157371438|ref|YP_001479427.1| inner-membrane translocator [Serratia proteamaculans 568]
 gi|157323202|gb|ABV42299.1| inner-membrane translocator [Serratia proteamaculans 568]
          Length = 428

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 101/339 (29%), Positives = 158/339 (46%), Gaps = 22/339 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  + +   L    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 101 IIPLMAVIALLFPFVATKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 160

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P+ A+++   G ++G P L+  GDYLAI TL   EI + +L  
Sbjct: 161 GLALGYQYLGLGFWAMLPLGALMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 220

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W  +T G  G+ V     F     R        +  F     +  +  IF+Y VL  +  
Sbjct: 221 WMSLTGGPNGVSVPAPTIFGLEFGRRAKDGGVPIHEFLGIAYNPNLKFIFIYAVLFLVVL 280

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   I   L R  I  AW  +R+++ A  SL    +  KLSAF + ++  G+AG FFA  
Sbjct: 281 LVLYIKHRLTRMPIGRAWEALREDEIACRSLGLNHVLVKLSAFMMGASTAGLAGVFFATY 340

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL      Y        
Sbjct: 341 QGFVNPTSFTFFESALILAIVVLGGMGSTIGVVLAAFVLTVAPELLRSFAEY-------- 392

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                     L  + +  +++ R   L+R+   S    +
Sbjct: 393 -------RVLLFGVLMVAMMIWRPRGLVRISRSSFAPRK 424


>gi|261420462|ref|YP_003254144.1| inner-membrane translocator [Geobacillus sp. Y412MC61]
 gi|319768132|ref|YP_004133633.1| inner-membrane translocator [Geobacillus sp. Y412MC52]
 gi|261376919|gb|ACX79662.1| inner-membrane translocator [Geobacillus sp. Y412MC61]
 gi|317112998|gb|ADU95490.1| inner-membrane translocator [Geobacillus sp. Y412MC52]
          Length = 354

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 66/323 (20%), Positives = 128/323 (39%), Gaps = 20/323 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +    +            Y+ S  I I +Y + + G+++++G  G +SL     Y IGA
Sbjct: 16  LLAGAAVWLGLPWLVFGNNYVLSTLILIGLYALVSTGMTLLMGYAGQISLGQAAFYGIGA 75

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+   L +  G   WL +   A+++    +++G+P  + R  YLA+ATL    I      
Sbjct: 76  YASAYLTANAGWPSWLALAAGAVLAALVALVVGIPVFRLREHYLALATLGFGVIMFTFFK 135

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +WK IT G  G +    +              R     +  ++  YY++           
Sbjct: 136 EWKEITGGLNGFFGIPPI--------------RIAGVPLQSDLQFYYLVSLFVLAGLWFA 181

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + R+ +  A R I  ++ A  SL   I   KL  F +S+ +  +AG+ +A     I+P
Sbjct: 182 RNIVRSRVGRALRAIHGSEVAASSLGVNISKYKLQIFMLSAVYASIAGSLYAHYVTFINP 241

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           D+F    +I  + +V++GG   +       A+ + + E    +      +          
Sbjct: 242 DLFGIVPSISFLIMVVIGGSAHVWGGLVGAAVYVCLGEWLKAVVPLLLPNAGG------E 295

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
                  + L ++++   + L  
Sbjct: 296 FEIVFFGLLLVVMLIYMPNGLTG 318


>gi|92118125|ref|YP_577854.1| inner-membrane translocator [Nitrobacter hamburgensis X14]
 gi|91801019|gb|ABE63394.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Nitrobacter hamburgensis X14]
          Length = 461

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 114/359 (31%), Positives = 179/359 (49%), Gaps = 40/359 (11%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           LLA    +   L      +Q+Y+  +GI +L YVM  WGL++VVG  GLL L  V  YA+
Sbjct: 103 LLAPALLIFALLVPVIFYNQRYLLDLGILVLTYVMLGWGLNVVVGLAGLLDLGYVAFYAV 162

Query: 77  GAYSYVILGSRY---------------------GLSIWLLIPVSAMISGACGMIMGLPSL 115
           GAYSY +L                           + W+L+P+S +++   G+++G P L
Sbjct: 163 GAYSYALLAQSGLPFPYFTDTYPYIAMDFLQLGPWAFWVLLPISGLLAALWGVLLGFPVL 222

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFR 171
           + RGDYLAI TL   EI + +++ W+ +T G  G+    R    G  +            
Sbjct: 223 RLRGDYLAIVTLAFGEIIRMVILNWQDLTGGPNGVSGIPRPTVFGIPLTPGENGFAALIG 282

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
            P S     +F++Y++L +  L+  + + LRR  I   W  +R+++ A  +L   I   K
Sbjct: 283 VPFSPTHRLVFLFYLILTLALLTNWVTIRLRRLPIGRVWEAMREDEVACRALGINITTTK 342

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           LSAFA+ + F G AGAFFA  +  ISP+ F F E+ +V++IV+LGGM S   +A A   +
Sbjct: 343 LSAFAIGAMFGGFAGAFFATRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAAVAM 402

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           IG  EL  G++ +                  +    + L+++ R   L+  RTP+ FL+
Sbjct: 403 IGGFELFRGLDQF---------------RMLVFGGVMVLLMVWRPRGLVSHRTPTVFLQ 446


>gi|75676395|ref|YP_318816.1| ABC-type branched-chain amino acid transport system permease
           component [Nitrobacter winogradskyi Nb-255]
 gi|74421265|gb|ABA05464.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Nitrobacter winogradskyi Nb-255]
          Length = 456

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 114/360 (31%), Positives = 177/360 (49%), Gaps = 40/360 (11%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           LL     +   L      +Q+Y+  + I +L YVM  WGL++VVG  GLL L  V  YA+
Sbjct: 98  LLIPALLIFALLVPVIFYNQRYLLDLAILVLTYVMLGWGLNVVVGLAGLLDLGYVAFYAV 157

Query: 77  GAYSYVILGSRY---------------------GLSIWLLIPVSAMISGACGMIMGLPSL 115
           GAYSY +L                           + W L+PVS +++   G+++G P L
Sbjct: 158 GAYSYALLAQSGLPFPYFIETYPYVAIDFLQLGSWAFWALLPVSGLLAAFWGVLLGFPVL 217

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFR 171
           + RGDYLAI TL   EI + +++ W+ +T G  GI    R    G  +            
Sbjct: 218 RLRGDYLAIVTLAFGEIIRLVILNWQDLTGGPNGISGIPRPTVFGIPLTRGDDGFAALIG 277

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
            P S     +F++Y++L +  L+  + + LRR  I  AW  +R+++ A  +L   I   K
Sbjct: 278 VPFSPTHRLVFLFYIILALALLTNWVTIRLRRLPIGRAWEAMREDEVACRALGINITTTK 337

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           LSAFA+ + F G AGAFFA  +  ISP+ F F E+ +V++IV+LGGM S   +A A   +
Sbjct: 338 LSAFAIGAMFGGFAGAFFATRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAAIAM 397

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           IG  EL  G++ +                  +    + L+++ R   L+  R P+ FL++
Sbjct: 398 IGGFELFRGLDQF---------------RMLVFGGVMVLLMIWRPRGLVSHRAPTVFLQK 442


>gi|308513235|ref|YP_003933638.1| branched-chain amino acid ABC transporter permease [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|307346941|gb|ADN43925.1| branched-chain amino acid ABC transporter, permease protein
           [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 339

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 84/315 (26%), Positives = 147/315 (46%), Gaps = 28/315 (8%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                 +  Y+ ++ +++LIY M A GL+I+VG  GL+SL      AIGAY   IL   Y
Sbjct: 28  AFPFYVNNSYVMNLAVKMLIYTMMALGLNILVGYTGLVSLGQAGFVAIGAYVTTILTKTY 87

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
             + +  + +S +++   G+++GLPSL+  G YL+I TL   EI + I+I W+P+TNG  
Sbjct: 88  SFNFFPALLLSLLVAAVFGLVVGLPSLRLTGTYLSIITLGFGEIIRTIIIVWQPVTNGPL 147

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           GI        LG                 IY   +Y + L    L       L  + +  
Sbjct: 148 GIRNIPIPKILGLKFS-------------IYNGGLYILTLICLLLVTLFCHRLVNSKMGR 194

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           A+R ++ ++ A   +   + + K+ AF +++    +AG+ ++     I  + F F  + +
Sbjct: 195 AFRAVKGDETAGVMMGIEVTYYKVIAFILAAVICALAGSLYSIQLGYIDQNTFTFDVSTL 254

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           ++SIVILGGM ++  +   + ILI + E+   +  Y                  L  + L
Sbjct: 255 ILSIVILGGMGTIRGMYVGSFILILLPEISRSLLDY---------------RFVLYGLIL 299

Query: 329 FLVILMRSHSLLRLR 343
            +++  R   +L  R
Sbjct: 300 VIMMRFRPQGILGWR 314


>gi|295402504|ref|ZP_06812455.1| inner-membrane translocator [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312109602|ref|YP_003987918.1| inner-membrane translocator [Geobacillus sp. Y4.1MC1]
 gi|294975451|gb|EFG51078.1| inner-membrane translocator [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311214703|gb|ADP73307.1| inner-membrane translocator [Geobacillus sp. Y4.1MC1]
          Length = 354

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 69/307 (22%), Positives = 134/307 (43%), Gaps = 20/307 (6%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             +  Y+ S  I I  Y + + GL++++G  G +SL     Y IG+Y+     + +GLS 
Sbjct: 30  FSTNNYLLSTMIMIGFYTIVSTGLTLLMGYAGQISLGQAAFYGIGSYTSAYFTTHFGLSP 89

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           WL +   A+++     ++G+P+ + R  YLA+ATL    I      +WK IT G  G + 
Sbjct: 90  WLAMIAGAVLAAMVAFVIGIPAFRLREHYLALATLGFGVIVFTFFKEWKEITGGLNGFFG 149

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
              +   G T+++  +F              YY++             + R+ +  A  +
Sbjct: 150 IPPIRLFGITIQTDFQF--------------YYLVWVFALAGILFARNIVRSRVGRALLS 195

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  ++ A  SL   I   KL  F +S+ +  +AG+ +A     I+P +F+   +I  + +
Sbjct: 196 IHGSEVAANSLGVNITKYKLQMFMISAVYAAIAGSLYAHYVTFINPQLFEMITSIYFLIM 255

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           V++GG  S+        + + + EL   +   +  +      +          I L +++
Sbjct: 256 VVIGGNGSIWGGLIGATVYVCLGELLKEIVPLFIPN------ASGEFEIVFFGILLVMML 309

Query: 333 LMRSHSL 339
           +   + L
Sbjct: 310 IYMPNGL 316


>gi|226358033|ref|YP_002787772.1| branched-chain amino acid ABC transporter, permease component
           [Deinococcus deserti VCD115]
 gi|226319676|gb|ACO47670.1| putative branched-chain amino acid ABC transporter, permease
           component [Deinococcus deserti VCD115]
          Length = 598

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 59/316 (18%), Positives = 112/316 (35%), Gaps = 22/316 (6%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             +  ++   ILI  +   GL ++ G +GL S        +GAY+  I+ +R G S WL 
Sbjct: 30  PTFQVTLLTNILISAIVVTGLVLLTGVVGLTSFGHAAFMGVGAYTTAIVSTRLGWSPWLG 89

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +    + +G+    +GL +L+ +G YL +AT+        +      +  G  G+     
Sbjct: 90  LLAGFVTTGSIAAFLGLITLRMQGHYLPLATIAWGISLFYVFGNTPAL-GGNTGLTDIPP 148

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           L   G  + S   F       +         LL               +    A R +R 
Sbjct: 149 LQLFGLNLTSPRSFAYLALLGLGLTALAAQFLL--------------SSRTGRAMRALRS 194

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
                 +        ++  F +S+    +AG  +A ++  ++P  F  S  I  + + ++
Sbjct: 195 GPLVAEAFGVNTFSLRVQVFVLSALMASLAGWLYAHNQRFLNPTPFSLSAGIEYLFMAVV 254

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG   +      +A++  + E    +          F        T +  + + LV+   
Sbjct: 255 GGSQYVWGGVMGSALITQLREQLRDVLPGLLGQQGSF-------ETVVFGLLIILVLQFA 307

Query: 336 SHSLLRLRTPSNFLER 351
              L  L       ER
Sbjct: 308 RRGLWPLVERILPQER 323


>gi|332286060|ref|YP_004417971.1| putative branched-chain amino acid transport system protein
           [Pusillimonas sp. T7-7]
 gi|330430013|gb|AEC21347.1| putative branched-chain amino acid transport system protein
           [Pusillimonas sp. T7-7]
          Length = 593

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 63/322 (19%), Positives = 135/322 (41%), Gaps = 25/322 (7%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  + + L +       +  ++ + + ++   +   +IV G  G LSL   + Y IG Y+
Sbjct: 14  VILMAIMLLIPVVMGTSFWTNLFVLLFVFSALSVAWNIVGGYAGQLSLGHAVFYGIGGYT 73

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +L   +G++ WL +   A+ISG   +I+  P+L+ +G + A+AT+ + E+ + ++I  
Sbjct: 74  ATLLTQNFGITPWLGMFAGALISGLVAVIISYPTLRLKGPFFALATIAILEVVRLLVIHE 133

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           +  T G +GI +   + +     R                I   Y+   +  +      +
Sbjct: 134 ERWTGGSSGISLPLNIGWTWMVFREK--------------INYVYIAFFIFVMVVWASWF 179

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +R++ + +    IR+ ++A  ++       K+ A  +S+    + G F       + P  
Sbjct: 180 VRKSRMGHYLIAIREREEAAKAVGIATANMKIWAAVISAMLTSIIGTFHITYLTFVDPAS 239

Query: 261 -FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F    +I +    ++GG+ ++S       +++ + EL  G      N +          
Sbjct: 240 AFSLELSIQIAMFALIGGLGTISGPIAGAFLVLPIAELARGWLSSVGNGM---------- 289

Query: 320 HTTLMVIALFLVILMRSHSLLR 341
           H  +  I L +V+L   H L  
Sbjct: 290 HGLVYGIILVVVVLTIPHGLAG 311


>gi|86750792|ref|YP_487288.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86573820|gb|ABD08377.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 443

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 108/338 (31%), Positives = 173/338 (51%), Gaps = 19/338 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            +A V  +   L       Q+YI  +GI +L YVM  WGL+IVVG  GLL L  V  YA+
Sbjct: 106 AVAPVLLIFTILVPVIFYDQRYILDLGILVLTYVMLGWGLNIVVGLAGLLDLGYVAFYAV 165

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAYSY +L + + LS W+ +P++ +++   G+++G P L+ RGDYLAI TL   EI + +
Sbjct: 166 GAYSYALLATNFDLSFWICLPLAGILAAFWGVLLGFPVLRLRGDYLAIVTLAFGEIIRLV 225

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTV----RSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           +I W+ +T G  GI    R    G  +      L      P S     +F++Y++L +  
Sbjct: 226 IINWQSLTGGPNGISGIPRPTLFGIPLVPGENGLAAMLGIPFSPSHRLVFLFYLILALAL 285

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           ++    + LRR  I  AW  +R+++ A  +L       KL+AFA  + F G AGAFFA  
Sbjct: 286 ITNWATIRLRRLPIGRAWEALREDEVACRALGINTTTTKLTAFATGAMFGGFAGAFFATR 345

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ISP+ F F E+ +V++IV+LGGM S               +L   +         + 
Sbjct: 346 QGFISPESFTFQESALVLAIVVLGGMGS---------------QLGVALAALALIGGFEL 390

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
               +     +  +++ L+++ R   L+  R P+ +L+
Sbjct: 391 FRGLDQFRMLVFGLSMVLLMVWRPRGLIGHRAPTVYLQ 428


>gi|87120384|ref|ZP_01076279.1| inner-membrane translocator [Marinomonas sp. MED121]
 gi|86164487|gb|EAQ65757.1| inner-membrane translocator [Marinomonas sp. MED121]
          Length = 423

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 96/331 (29%), Positives = 157/331 (47%), Gaps = 21/331 (6%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++ ++  ++L   +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAI
Sbjct: 94  MVWIIPVVILIGLMVPFIASKYVLTVIILGLIYVLLGLGLNIVVGLAGLLDLGFVGFYAI 153

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY   +     GL  W ++P++A+++   G I+G P L+  GDYLAI TL   EI + I
Sbjct: 154 GAYGLALGYEYLGLGFWSMLPIAAILAAIAGAILGFPVLRMHGDYLAIVTLGFGEIIRLI 213

Query: 137 LIKWKPITNGKAGIYVADRLYFL------GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           L  W  +T+G  G+       F                FF    +     +F+Y +L  +
Sbjct: 214 LNNWSAVTHGPNGVSAPLPQLFGLEFKRRSRDGTPFHEFFNLDYNSGFKYMFVYLILFIV 273

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L   +   L +  I  AW  +R+++ A  SL    +  KLSAF + ++  G+AG FFA
Sbjct: 274 VLLVLHVKQRLVKMPIGRAWEALREDEIACRSLGLNHVLVKLSAFMMGASVAGIAGVFFA 333

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             +  ++P  F F E+ ++++IV+LGGM S   +  A   L    EL      Y      
Sbjct: 334 TYQGFVNPSSFTFMESALILAIVVLGGMGSTLGVVIAAFFLTVAPELLREFAEY------ 387

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                       +  I + ++++ +   L+R
Sbjct: 388 ---------RVLMFGILMVVMMIWKPRGLVR 409


>gi|326405586|ref|YP_004285668.1| branched-chain amino acid ABC transporter permease/ATP-binding
           protein [Acidiphilium multivorum AIU301]
 gi|325052448|dbj|BAJ82786.1| branched-chain amino acid ABC transporter permease/ATP-binding
           protein [Acidiphilium multivorum AIU301]
          Length = 660

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 82/340 (24%), Positives = 130/340 (38%), Gaps = 51/340 (15%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---------------- 83
             +      Y   A GL+IVVG  GLL L     +AIGAY+Y I                
Sbjct: 36  IDVAANSCAYAALALGLNIVVGFTGLLDLGYAAFFAIGAYAYGILNSFQLHPHWSAAWAP 95

Query: 84  ---------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                              +    WL++P SA+I+   GM  G P+L+ +GDYLAI TL 
Sbjct: 96  LAAIGFVAKLGAGAAATVHFTFPFWLMLPASAVIAACFGMAFGAPTLRLKGDYLAIVTLG 155

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
             EI   +   W  +TNG  G+         G         + +    ++  +       
Sbjct: 156 FGEIVPIVARNWSSLTNGAEGLNGVGPPVLFGYRFGINATPYYYVGLGLVLLLLF----- 210

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
                   I L L+ + I  AW  +R+++ A  ++       KL AFA+ + F GM G F
Sbjct: 211 --------ISLRLKPSRIGRAWMAVREDEIAASAMGVHTTRLKLLAFAMGAGFAGMTGTF 262

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           + A     +PDMF    +I+V+ +++LGG+ S+        +L  +          +   
Sbjct: 263 YIAKLQTATPDMFDLPVSIMVLVMIVLGGLASVWGAILGAVLLELLQAWFLPALSGWVQG 322

Query: 309 L-------LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           L          +         +  I L  ++L R   L+ 
Sbjct: 323 LGNAIHSPFLQNLELTSASELIFGIILVTMMLYRRDGLVP 362


>gi|146634|gb|AAA83885.1| livM [Escherichia coli str. K-12 substr. W3110]
          Length = 424

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 92/329 (27%), Positives = 141/329 (42%), Gaps = 25/329 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIG +           
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGLHFCAAQSLLRLG 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + L      +     G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 LLDLPADC-WINGSGGGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 221

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +    G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 222 SQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 281

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW  + +++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 282 LRMPLGRAWEALGEDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 341

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y                 
Sbjct: 342 TFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY---------------SM 386

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            ++   + L+++ R   LL +      L+
Sbjct: 387 LMLGGLMVLMMIWRPQGLLPMTRRQLKLK 415


>gi|329911401|ref|ZP_08275505.1| Branched-chain amino acid transport system permease protein livM
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327545926|gb|EGF31026.1| Branched-chain amino acid transport system permease protein livM
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 404

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 99/379 (26%), Positives = 170/379 (44%), Gaps = 40/379 (10%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           + F  + N     + +  +   +++F F+       ++  +    L+Y+M A GL+IVVG
Sbjct: 3   NYFDTKTNPRKAYIGMGIIALIVIVFPFIAQNYGNSWV-RIMDFALLYIMLALGLNIVVG 61

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRY--------------------------------G 89
             GLL L  +  YA+GAY   +L S                                   
Sbjct: 62  FAGLLDLGYIAFYALGAYLTALLASPQFAVVLESFVNQYPAIGNALVALFGPEIREHGIH 121

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW---KPITNG 146
           LSIW ++P+SA+ +G  G ++G P+LK RGDYLAI TL   EI +  +        ITNG
Sbjct: 122 LSIWFIVPLSALFAGVFGALLGAPTLKLRGDYLAIVTLGFGEIIRIFMNNLNGPVNITNG 181

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFR---FPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             GI + D +   G ++           F S  +      YY  L +C     + + L+ 
Sbjct: 182 PQGINMIDPIRIFGVSLAGEPGSRANLVFGSFSMPSVNAYYYFFLALCIAIIFVSVRLQD 241

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           + +  AW  IR+++ A  ++       KL AFA+ ++F G+AG+ FA+ +  +SP+ F  
Sbjct: 242 SRLGRAWVAIREDEIAAKAMGINTRNVKLLAFAMGASFGGVAGSMFASFQGFVSPESFSL 301

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-FDCSFNMRHTT 322
           +E+I V+++V+LGGM  +  +     IL  + E+          ++         +    
Sbjct: 302 TESIAVLAMVVLGGMGHIPGVILGGIILAALPEVLRHTVEPIQMAIFGKVWIDAEVLRQL 361

Query: 323 LMVIALFLVILMRSHSLLR 341
           L  +A+ +++L R   L  
Sbjct: 362 LYGLAMVVIMLSRPAGLWP 380


>gi|330815032|ref|YP_004358737.1| ABC transporter related protein [Burkholderia gladioli BSR3]
 gi|327367425|gb|AEA58781.1| ABC transporter related protein [Burkholderia gladioli BSR3]
          Length = 594

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 120/327 (36%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L     +    L +  G  +  +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   LFWAFTIVLFALPVLPGVLRIPEYWVTLLNYIGLYSIVAIGLVLLTGVGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IGAY+  +L + YGLS WL +    +++    +++G  +++  G +L + T+       
Sbjct: 69  GIGAYATALLSTGYGLSPWLGLIAGVIVTAVVALVLGAVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +     GI     L   G T+ +                 +YY++  +   +
Sbjct: 129 YLFGNLDLL-GKYDGINGIPALRVFGITLDT--------------GRSLYYLIWLVVIAA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            + +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  + 
Sbjct: 174 IASVRNLLNSRPGRAIRALRGGGVMAEAMGVNTAWMRVLIFVYAAVLASVSGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  +  I  + + ++GG+  +       AIL  + +    +          F  
Sbjct: 234 AVNPTPFGLNHGIEFLFMAVVGGVAHVWGAVLGAAILTVLQDWLQSLLPRLLGQDGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + + +++      +  
Sbjct: 292 -----EIIVFGVVMVVLLQTARDGVWP 313


>gi|121606408|ref|YP_983737.1| ABC transporter-like protein [Polaromonas naphthalenivorans CJ2]
 gi|120595377|gb|ABM38816.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
           / amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Polaromonas naphthalenivorans CJ2]
          Length = 643

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 71/290 (24%), Positives = 133/290 (45%), Gaps = 16/290 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L+A +  L L   +    S  Y   M   I+IY +  +GL IVVG  G +SL     + +
Sbjct: 6   LVAAIIGLALLAAVPLMTSNSYYIHMVGTIMIYAILLYGLDIVVGYTGQVSLGHAGLFGV 65

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G+Y+  +L  + G  +WL+IP S  ++   G ++ LP+L+  G YLA+ TL    I Q +
Sbjct: 66  GSYTAGVLFLKLGAPLWLIIPASIAVTAGFGALLALPALRVTGPYLAMVTLAFGTIIQIL 125

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           + +   +T G  GI +                               Y+++  +  +S  
Sbjct: 126 INEMNFLTEGPLGITIPKPSIAGYKLDEH----------------GFYWLVFALMVVSLV 169

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++  + ++ +  A+  +R +  A   +  ++   K+ AF +S+ F G+AG  +A S   I
Sbjct: 170 VVDRILKSQLGRAFEALRGSPVASDCMGVSVYRYKVYAFVISAGFAGLAGCLYAYSEQYI 229

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           SP+ + F   ++ +  VI+GG  + S      AI++ + +L   +  +  
Sbjct: 230 SPNTYNFELTVLFLLAVIMGGRKTRSGALLGAAIIVILPKLLDDLELFRI 279


>gi|295095496|emb|CBK84586.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           (TC 3.A.1.4.-) [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 424

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 98/339 (28%), Positives = 158/339 (46%), Gaps = 22/339 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  ++         + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 97  IIPLIVTLAICFPFVATKYVLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 156

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+++   G ++G P L+  GDYLAI TL   EI + +L  
Sbjct: 157 GLALGYQYLGLGFWSMLPLAALMAAGAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 216

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+      +F     R           FF    +  +  IF+Y VL  +  
Sbjct: 217 WLTFTGGPNGVSAPAPTFFGLEFGRRAKEGGVPFHEFFGLTYNPNLKFIFIYAVLFLVVM 276

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   I   L R  I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA  
Sbjct: 277 LVLYIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGIAGVFFATY 336

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL      Y        
Sbjct: 337 QGFVNPTSFTFFESALILAIVVLGGMGSTVGVVLAAFVLTVTPELLRSFAEY-------- 388

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                     L  + + ++++ R   L+R+      + +
Sbjct: 389 -------RVLLFGMLMVVMMIWRPRGLIRINRSGFAVRK 420


>gi|115525794|ref|YP_782705.1| ABC transporter related [Rhodopseudomonas palustris BisA53]
 gi|115519741|gb|ABJ07725.1| ABC transporter related [Rhodopseudomonas palustris BisA53]
          Length = 589

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 61/326 (18%), Positives = 118/326 (36%), Gaps = 22/326 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  +V+ L++           +   +   I +  + A GL ++ G  GL S        
Sbjct: 4   LLPVLVFALVVAALPLIPGLPPFWIVLLDNIGLAALVAMGLVLLTGVGGLTSFGQAAFCG 63

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            GAY+  +L + YG S WL +P +  +SGA  +++GL +++  G YL + T+        
Sbjct: 64  FGAYTTAVLTTAYGWSPWLTLPAALAVSGAAAVLLGLMTVRLSGHYLPLGTIAWGISLFY 123

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +  K + +     GI     L   G  +                   +Y+V+     L A
Sbjct: 124 LFSKLEIL-GRNDGISGIPPLAIGGFKMLD--------------PGAIYFVIWAAVILCA 168

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + + L  +    A R +R    A  +       AKL  F  ++   G++G  +A  +  
Sbjct: 169 LLTMNLLDSRTGRAIRALRRGHIAAEAFGVQTARAKLLVFIYAAVLAGLSGWLYAHFQRA 228

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            +P  F     I  + I ++GG   +        I++ + E+        F         
Sbjct: 229 ANPTPFGPQAGIEYLFIAVVGGAGYVWGAVLGAGIVVVLKEVLQSTLPALFGGQ------ 282

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  +    L +++ +    +  
Sbjct: 283 -GQLEIIVFGTLLVVLLQLAPGGVWP 307


>gi|297198974|ref|ZP_06916371.1| branched-chain amino acid ABC transporter permease [Streptomyces
           sviceus ATCC 29083]
 gi|197711104|gb|EDY55138.1| branched-chain amino acid ABC transporter permease [Streptomyces
           sviceus ATCC 29083]
          Length = 592

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 75/359 (20%), Positives = 139/359 (38%), Gaps = 29/359 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R ++         +       +    T++  +  ++G+ ILI+   A GL+IVVG  GLL
Sbjct: 225 RFSRIVARNRSFTLAMGFAAAIAFPFTQTNDHYANIGVNILIFGTVALGLNIVVGLAGLL 284

Query: 67  SLNCVIAYAIGAYSYVILG-------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
            L  V    +GAY+  ++        S      W      A  S   G+++G P+L+ RG
Sbjct: 285 DLGYVAFLGVGAYTAALVSGSEFSRFSGVHFPFWAAALTGAAASLVFGVLIGAPTLRLRG 344

Query: 120 DYLAIATLIMSEIFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           DYLAI TL   EIF+  +      +      G      +  L     +L +        +
Sbjct: 345 DYLAIVTLGFGEIFRIAVNNMDGDSGPDLTNGPNGIPAIPDLNFFGFNLGQAHDVAGFTL 404

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 Y +++ +  +   +      + I  +W  IR+++ A  ++       KL AFA+
Sbjct: 405 GRFANYYLLMVLIMAIVVLVYTRAADSRIGRSWIAIREDETAATAMGINGFRVKLIAFAL 464

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILI 292
            +   G+AG   A     + P  ++F+      +  +++ V+LGGM +++      A+L 
Sbjct: 465 GATLAGLAGTVSAHVTYSVVPTPYQFAGSTPPNSAFLLAAVVLGGMGTVAGPILGAALLY 524

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            + E    +                 +      IAL L++  R   ++  R        
Sbjct: 525 LLPEKLVFLQD---------------KSLLAFGIALILLMRFRPEGIIANRRRQLEFHE 568


>gi|172065388|ref|YP_001816100.1| inner-membrane translocator [Burkholderia ambifaria MC40-6]
 gi|171997630|gb|ACB68547.1| inner-membrane translocator [Burkholderia ambifaria MC40-6]
          Length = 389

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 81/345 (23%), Positives = 152/345 (44%), Gaps = 17/345 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +     ++    +  +    Y   +    ++YVM A GL++VVG  GLL L  +  
Sbjct: 23  VIIGILTAVFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIAF 82

Query: 74  YAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           YA+GAY+  +L S +                 +   L++PV+  ++   G+++G P+L+ 
Sbjct: 83  YAVGAYTAALLSSPHLTSQFEWIAALAPNGLHIPFLLIVPVAMALAATFGILLGAPTLRL 142

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL   EI +  +       N   G      +  +     +L +        +
Sbjct: 143 RGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITGIDPVHVGGFNLSQTHTLFGFQL 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 YY+ +    L   I   L+ + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 203 PSVYIYYYLFVLCSLLVIWICTRLQHSRIGRAWAAIREDEIAAKAMGINTRNVKLLAFAM 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            ++F G++GA F + +  +SP+ F  +E+++V++ V+LGGM  +  +     +L  + E 
Sbjct: 263 GASFGGLSGAMFGSFQGFVSPESFTLTESVVVLAGVVLGGMGHIPGVILGAVLLAVLPEF 322

Query: 298 CCGMNFYYFNSLLKFDC-SFNMRHTTLMVIALFLVILMRSHSLLR 341
                      L   +     +    +  +A+  ++L RS  L  
Sbjct: 323 LRTTMGPLQQLLFGHEIVDTEVIRQLVYALAMVFIMLYRSEGLWP 367


>gi|148262074|ref|YP_001236201.1| ABC transporter related [Acidiphilium cryptum JF-5]
 gi|146403755|gb|ABQ32282.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
           / amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Acidiphilium cryptum JF-5]
          Length = 660

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 82/340 (24%), Positives = 130/340 (38%), Gaps = 51/340 (15%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---------------- 83
             +      Y   A GL+IVVG  GLL L     +AIGAY+Y I                
Sbjct: 36  IDVAANSCAYAALALGLNIVVGFTGLLDLGYAAFFAIGAYAYGILNSFQLHPHWSAAWAP 95

Query: 84  ---------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                              +    WL++P SA+I+   GM  G P+L+ +GDYLAI TL 
Sbjct: 96  LAAIGFVAKLGAGAAATVHFTFPFWLMLPASAVIAACFGMAFGAPTLRLKGDYLAIVTLG 155

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
             EI   +   W  +TNG  G+         G         + +    ++  +       
Sbjct: 156 FGEIVPIVARNWSSLTNGAEGLNGVGPPVLFGYRFGINATPYYYVGLGLVLLLLF----- 210

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
                   I L L+ + I  AW  +R+++ A  ++       KL AFA+ + F GM G F
Sbjct: 211 --------ISLRLKPSRIGRAWMAVREDEIAASAMGVHTTRLKLLAFAMGAGFAGMTGTF 262

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           + A     +PDMF    +I+V+ +++LGG+ S+        +L  +          +   
Sbjct: 263 YIAKLQTATPDMFDLPVSIMVLVMIVLGGLASVWGAILGAVLLELLQAWFLPALSGWVQG 322

Query: 309 L-------LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           L          +         +  I L  ++L R   L+ 
Sbjct: 323 LGNAIHSPFLQNLELTSASELIFGIILVTMMLYRRDGLVP 362


>gi|328544149|ref|YP_004304258.1| ABC transporter related protein [polymorphum gilvum SL003B-26A1]
 gi|326413892|gb|ADZ70955.1| ABC transporter related protein [Polymorphum gilvum SL003B-26A1]
          Length = 844

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 66/335 (19%), Positives = 126/335 (37%), Gaps = 35/335 (10%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L KY  +   +A +  L L + +          +    I+I  +   GL+++VG  GL S
Sbjct: 6   LTKYRPLWIGMAALIALPLIMPVIGLT-----VNTASVIVILAIATMGLNLLVGYTGLHS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYG-LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
               + + IGAY+  +  + +    I L I VS        +++G   L+ RG Y A+ T
Sbjct: 61  FGHSMWFGIGAYAAGLAQTHWFAGQIGLPILVSMAFVAVVSLVIGALILRRRGVYFALLT 120

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L +  +   +  +W  +T G+ G+    R      ++ +                  YY+
Sbjct: 121 LALVALSYTVAFRWTEVTGGEDGLGGLQRGSLGPISLDNSTN--------------YYYL 166

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +       +L L R+   +    IR+NQ         I   KL++F +S+   G+AG
Sbjct: 167 VAVIGLAVLFFMLRLERSPFGHVLVAIRENQLRATFQGYNIDRYKLASFVISAVMTGLAG 226

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A        +S +    + +  ++++V++GGM ++   A      I   EL         
Sbjct: 227 ALSGFQHYMVSAESTSIALSGEMLAMVVIGGMHNILGPAIGVVFYILFRELFS------- 279

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    +         I     ++     L+ 
Sbjct: 280 --------IWTTNWLLWFGIVFVGFVIFSPGGLVG 306


>gi|33591818|ref|NP_879462.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella pertussis Tohama I]
 gi|33571461|emb|CAE44946.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella pertussis Tohama I]
 gi|332381235|gb|AEE66082.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella pertussis CS]
          Length = 607

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 59/320 (18%), Positives = 130/320 (40%), Gaps = 25/320 (7%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L + L +GA  +      M   ++I ++ A G++++ G  G +SL     +AIGAY   
Sbjct: 19  VLAIALAVGAGHADTGTVQMWSFVIINILLAQGINLLTGINGQISLGHAGFFAIGAYVSA 78

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           I    +G+   + + ++ +++   G ++  P+ + R  YLA+ +L    I   +  + + 
Sbjct: 79  IALKSWGVPFPVALAMATIVASGVGFLLAGPAGRVREFYLAMMSLGFGLIVYELARELRG 138

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+            +            + I  +  + +LL +  +   ++    
Sbjct: 139 VTGGVMGMRGIPSSQIGTLQI----------FGWSIDTVAYFRILLAVLLVVMLMLRNFV 188

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           ++    A+  +  ++ A  SL  +    K +A+A+S    G+AG F+A     ++P+ F 
Sbjct: 189 KSHYGRAFYAVHVSEIAAGSLGISQAAVKRAAYAISGGLAGLAGGFYAHMIGYLTPESFG 248

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
              +I ++ + I+GG+ SL+       +   + +     N Y                  
Sbjct: 249 LMRSIEILVMSIVGGLGSLAGQVYGAVLFTYLPQKLQAFNDY---------------QYI 293

Query: 323 LMVIALFLVILMRSHSLLRL 342
           +  + L  +  +    L  L
Sbjct: 294 VYGLILVFIFTLLPRGLAGL 313


>gi|328950785|ref|YP_004368120.1| Monosaccharide-transporting ATPase [Marinithermus hydrothermalis
           DSM 14884]
 gi|328451109|gb|AEB12010.1| Monosaccharide-transporting ATPase [Marinithermus hydrothermalis
           DSM 14884]
          Length = 594

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 63/320 (19%), Positives = 123/320 (38%), Gaps = 21/320 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
            + L+L +FL       +  ++        +   GL ++ G  GL S         GAY+
Sbjct: 5   AWALVLLVFLLPLVLPPFYVTLLNFTAFNALVVLGLYLLTGLAGLTSFGQAAFMGAGAYA 64

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             I  +R  L  WL + ++ + SGA   ++G  +++ +G YL +AT+        ++  W
Sbjct: 65  TAIATTRLSLDPWLGLGLAVLTSGAFAWVLGAITVRLKGHYLPLATIAWQVALFIVMGSW 124

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G+ G+     ++ LG  +R+                  YY+      L+A  +  
Sbjct: 125 ITLTGGRTGLTDLPPVHLLGLELRT--------------PQAFYYLAWSFAVLAAWGVNN 170

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  +      R +R +  A  S        KL  F ++    G+AG  +A     ++P  
Sbjct: 171 LVASRSGRMIRALRGDAVAAASFGANPATLKLGVFVLAGVLAGVAGWLYAHFLRFVNPSP 230

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F    +I  + + ++GG+ +L  +   +A++ G+      +    F     F        
Sbjct: 231 FGLEASIEFLIMGVVGGIAALPGVFLGSALITGLENWLQDLLPRLFGPGGNF-------E 283

Query: 321 TTLMVIALFLVILMRSHSLL 340
                + L L++      L 
Sbjct: 284 IIAFGLVLILILHRAPKGLW 303


>gi|261340306|ref|ZP_05968164.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraE [Enterobacter cancerogenus ATCC 35316]
 gi|288317396|gb|EFC56334.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraE [Enterobacter cancerogenus ATCC 35316]
          Length = 429

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 99/318 (31%), Positives = 152/318 (47%), Gaps = 22/318 (6%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY   +     GL
Sbjct: 113 FPFVATKYVLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGL 172

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W ++P++A+++ A G ++G P L+  GDYLAI TL   EI + +L  W   T G  G+
Sbjct: 173 GFWTMLPLAALMAAAAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLTFTGGPNGV 232

Query: 151 YVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
                 +F     R           FF    +  +  IF+Y VL  +  L   I   L R
Sbjct: 233 SAPPPTFFGLEFGRRAKEGGVPFHEFFGLTYNPNMKFIFIYAVLFLVVLLVLYIKHRLTR 292

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
             I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA  +  ++P  F F
Sbjct: 293 MPIGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGIAGVFFATYQGFVNPTSFTF 352

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            E+ ++++IV+LGGM S   +  A  +L    EL      Y                  L
Sbjct: 353 FESALILAIVVLGGMGSTVGVVLAAFVLTVTPELLRSFAEY---------------RVLL 397

Query: 324 MVIALFLVILMRSHSLLR 341
             + + ++++ R   L+R
Sbjct: 398 FGMLMVVMMIWRPRGLIR 415


>gi|307719581|ref|YP_003875113.1| transporter [Spirochaeta thermophila DSM 6192]
 gi|306533306|gb|ADN02840.1| transporter [Spirochaeta thermophila DSM 6192]
          Length = 331

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 75/338 (22%), Positives = 145/338 (42%), Gaps = 31/338 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +L  L++V    +   + +  +  Y   +     I V+ A GL+++ G  G L++ 
Sbjct: 6   RDGLVLAGLSIVVVAAVTALVRSGLTTLYTAQVITLSGINVIVALGLNLITGFTGQLAIG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+GAY+  +     G    L +    +++   GM++G P+ + RGDYLAI TL  
Sbjct: 66  HAGFMAVGAYTSALTMMLLGFPPVLGVISGGLLAAVVGMLIGFPTFRLRGDYLAIVTLAF 125

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            E+ + I+I    +T G AG+                     F    ++ +I    V+L 
Sbjct: 126 GEVIRVIIINLPSLTGGAAGLKGVPP----------------FAEGRMLKQIVAMDVVLV 169

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
             FL  +++  + R++   A   IRD++ A  ++   +   K+ +F +S+   G+ G  +
Sbjct: 170 FMFLVIALMYTVVRSSYGRALIAIRDDEIAAHTMGIDVFGYKMFSFTLSAFIAGLGGGLY 229

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A     ++P  F F +++ ++ IV+ GGM S++    A  +L  + E    +  Y     
Sbjct: 230 APFFGYLTPQTFTFLKSVEILIIVVFGGMGSITGTVVAGFLLTSLQEFLRFLKDY----- 284

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                        +  + L +++L R   L   R  S 
Sbjct: 285 ----------RMVIYPLILIVMMLFRPQGLFGEREISI 312


>gi|33603669|ref|NP_891229.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella bronchiseptica RB50]
 gi|33577794|emb|CAE35059.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella bronchiseptica RB50]
          Length = 604

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 59/320 (18%), Positives = 130/320 (40%), Gaps = 25/320 (7%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L + L +GA  +      M   ++I ++ A G++++ G  G +SL     +AIGAY   
Sbjct: 16  VLAIALAVGAGHADTGTVQMWSFVIINILLAQGINLLTGINGQISLGHAGFFAIGAYVSA 75

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           I    +G+   + + ++ +++   G ++  P+ + R  YLA+ +L    I   +  + + 
Sbjct: 76  IALKSWGVPFPVALAMATIVASGVGFLLAGPAGRVREFYLAMMSLGFGLIVYELARELRG 135

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+            +            + I  +  + +LL +  +   ++    
Sbjct: 136 VTGGVMGMRGIPSSQIGTLQI----------FGWSIDTVAYFRILLAVLLVVMLMLRNFV 185

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           ++    A+  +  ++ A  SL  +    K +A+A+S    G+AG F+A     ++P+ F 
Sbjct: 186 KSHYGRAFYAVHVSEIAAGSLGISQAAVKRAAYAISGGLAGLAGGFYAHMIGYLTPESFG 245

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
              +I ++ + I+GG+ SL+       +   + +     N Y                  
Sbjct: 246 LMRSIEILVMSIVGGLGSLAGQVYGAVLFTYLPQKLQAFNDY---------------QYI 290

Query: 323 LMVIALFLVILMRSHSLLRL 342
           +  + L  +  +    L  L
Sbjct: 291 VYGLILVFIFTLLPRGLAGL 310


>gi|258516925|ref|YP_003193147.1| inner-membrane translocator [Desulfotomaculum acetoxidans DSM 771]
 gi|257780630|gb|ACV64524.1| inner-membrane translocator [Desulfotomaculum acetoxidans DSM 771]
          Length = 328

 Score =  123 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 77/328 (23%), Positives = 132/328 (40%), Gaps = 20/328 (6%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++      LLFL L       Y+ S+ I I IY +   GL +++G  G +S      + I
Sbjct: 3   VIITSVLGLLFLALPFIIKSNYLLSILIVIGIYTLVVEGLGLLMGYAGQVSFGQAAFFGI 62

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G+Y+  IL +RY       +  + +I  A   I+G P+LK R  YLA+ATL    +    
Sbjct: 63  GSYTVAILTARYHWDTVAALLAAVVIPSAVAFIIGRPTLKLRELYLALATLAFGLLVHIA 122

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
             + + +T G +G+     L               F    +  +I  YY++     L   
Sbjct: 123 FNEGRELTGGPSGLTGIPYLS--------------FAGLILNRDIHFYYLVWAFVLLVFL 168

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L R+ I  A R IRD++ A  +        KL AF  S+   G+AG  +A     +
Sbjct: 169 AVRNLDRSRIGRAMRAIRDSELAAEANGINTALLKLQAFVFSAFLAGLAGGIYAYYITFV 228

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP  F F+ ++  + + ++GG+ ++        +++ + E+                   
Sbjct: 229 SPSPFGFNMSVQFVLMAVVGGLGTVWGPVLGVGLVVALGEVLRWFIPLVMPRAGG----- 283

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRT 344
                    I L LV++ R   L     
Sbjct: 284 -EYQIVFFGIILVLVMIFRPEGLSGRWR 310


>gi|239905775|ref|YP_002952514.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
 gi|239795639|dbj|BAH74628.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
          Length = 321

 Score =  123 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 74/323 (22%), Positives = 125/323 (38%), Gaps = 30/323 (9%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +  T   +Y  S+ I   +  + A GL++++G  G +SL     Y +GAY+  I  +R+G
Sbjct: 23  VPYTLPNEYYLSICILGALNAVIAVGLNLLMGYAGQVSLGHAAFYGLGAYATAIATTRFG 82

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L I   + +   ++     ++  P+LK +G YLA+ATL    I   +  +    T G +G
Sbjct: 83  LPIPAGMAIGVSLATVVAWVVAAPTLKLKGHYLAMATLGFGIIVSIVFNEAVDATGGPSG 142

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                RL   G    S                  Y ++  +      + L L ++    A
Sbjct: 143 YVGIPRLALFGYEFTSDH--------------SYYNLMAVVLTFVVLLSLNLMKSRTGRA 188

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R +  ++KA  SL   I   K   F +S+A  G+AG  +A     I+P  F F  ++ +
Sbjct: 189 LRALHVSEKAAASLGVDIAAHKRFVFVLSAALAGLAGVLYAHYLSFIAPASFGFGFSVQL 248

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           + +V+LGGM S+         L  + E                          +    L 
Sbjct: 249 VVMVVLGGMASVWGSVAGALFLTALPEALREFED---------------IDILVYGAILV 293

Query: 330 LVILMRSHSLL-RLRTPSNFLER 351
           L I+     L   L   +    R
Sbjct: 294 LTIMFLPDGLAGGLSRLTRRFRR 316


>gi|117928291|ref|YP_872842.1| inner-membrane translocator [Acidothermus cellulolyticus 11B]
 gi|117648754|gb|ABK52856.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Acidothermus cellulolyticus 11B]
          Length = 435

 Score =  123 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 86/339 (25%), Positives = 137/339 (40%), Gaps = 27/339 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L A    L + + L    S  + +    QI +YV+ A GL++VVG  GLL L  +  YAI
Sbjct: 98  LAAYGVLLAVAIVLPLVLSPYWQEVAVDQIGVYVLLALGLNVVVGLAGLLDLGYIAFYAI 157

Query: 77  GAYSYVILGSRYGLSIWLLI------PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           GAYS         +    ++      P +   +   G+I+G P+L+ RGDYLAI TL   
Sbjct: 158 GAYSCAYWTDSLPIHPPFVLNPFATIPFAIAAAMLAGVILGAPTLRLRGDYLAIVTLGFG 217

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           EI        + +T G  G       +         I  F     + I  +  YY+LL  
Sbjct: 218 EIITIYATNLQSVTGGSPGNSRPIPHF--------SINLFGLHYRWGIDNMPYYYLLLAF 269

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +       L  + +  AW  IR+++ A  +        KL AFA+ ++  G AG  FA
Sbjct: 270 VVMVIVFFHNLENSRVGRAWTAIREDEVAAAASGVNTFRYKLLAFAIGASTSGFAGVLFA 329

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           +    I+P  F   ++I+++ +VI GGM S+       AI+                   
Sbjct: 330 SKIQTITPLSFLLQQSILILVLVIFGGMGSIPGAIVGAAIIQWFPNGLKTYVRKEDL--- 386

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
                        +   L ++++ R   L+  R  +  L
Sbjct: 387 ----------FLYLGALLVVMMIYRPQGLIPSRRRAREL 415


>gi|254391542|ref|ZP_05006742.1| branched-chain amino acid ABC transporter permease protein
           [Streptomyces clavuligerus ATCC 27064]
 gi|197705229|gb|EDY51041.1| branched-chain amino acid ABC transporter permease protein
           [Streptomyces clavuligerus ATCC 27064]
          Length = 588

 Score =  122 bits (306), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 79/359 (22%), Positives = 139/359 (38%), Gaps = 28/359 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +RL+        + ++           T++      + + ILI+   A GL+IVVG  GL
Sbjct: 216 VRLSALTAKYRQVTMIAAFTAAAAFPFTQNTDTYTLIAVNILIFATVALGLNIVVGLAGL 275

Query: 66  LSLNCVIAYAIGAYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           L L  V    +GAY+  ++              W  +   A++S   G+I+G P+L+ RG
Sbjct: 276 LDLGYVAFLGVGAYTAALVSGSTASAFDVQFPFWASVLTGAVVSLIFGVIIGAPTLRLRG 335

Query: 120 DYLAIATLIMSEIFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           DYLAI TL   EIF+  +     ++      G      +  L     +           +
Sbjct: 336 DYLAIVTLGFGEIFRIAMGNLDGVSGPHITNGPNGIPNIPDLEFFGYNFGEPHTVLGVEL 395

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 Y ++L    L   +      + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 396 GSYANYYLLMLLAMVLVVVVFTRAENSRIGRAWVAIREDETAATAMGINGFRVKLIAFAL 455

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILI 292
            +   G+AG   A  +  + P+M++F+      +  +++ VILGGM ++S       +L 
Sbjct: 456 GATLAGVAGTVQAHVQHTVVPEMYQFAGPVPPNSAFLLAAVILGGMGTVSGPLLGATLLY 515

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            +      +  Y                     IAL +++  R   L+  R        
Sbjct: 516 MIPAKLQFLQDYQLLG---------------FGIALIVLMRFRPEGLIANRRAQLEYHE 559


>gi|90425652|ref|YP_534022.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90107666|gb|ABD89703.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 357

 Score =  122 bits (306), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 72/343 (20%), Positives = 150/343 (43%), Gaps = 27/343 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           +IF   +++   +  ++ V +              +Y  S+ IQI IY + A GL+I+VG
Sbjct: 21  TIFPTPMSRNAALAGIVVVCFA--------PLLLSEYWLSILIQIGIYGIAALGLNILVG 72

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G +S+     + +GA++   + +   + ++  IP+S +I+   G+I GLP+ + +G Y
Sbjct: 73  FTGQISIGHAAFFLLGAFTSAYISNTLPIPVFFAIPLSGVITALVGLIFGLPAARLKGLY 132

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           L IATL    I  +   + +  + G                V ++ + F      +  + 
Sbjct: 133 LVIATLAAQYILLDFFSRAEWFSGGS---------------VPAMAQPFSLFGYVLRGDR 177

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +YV+L     S  ++  L R+    A   +RD+  +   +   +   +  +F +++ F
Sbjct: 178 QYFYVVLAYVLASYLLVTNLMRSRDGRALVAVRDHYLSAEIMGINLTKYRTLSFGLAAFF 237

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE----L 297
            G+AGA +A  +  +S + F    +II +++VI+GG  S+      TA ++ + E    L
Sbjct: 238 AGIAGALYAHYQLVVSNEGFGIERSIIFLAMVIIGGTGSIMGTLMGTAFVVLLPESMEWL 297

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
              +     +  L  + +        + + + L ++     L 
Sbjct: 298 SASLKGGAIDRALSLNNNLTFLREIAIGVIIILFLIFEPDGLA 340


>gi|270262690|ref|ZP_06190961.1| transporter [Serratia odorifera 4Rx13]
 gi|270043374|gb|EFA16467.1| transporter [Serratia odorifera 4Rx13]
          Length = 428

 Score =  122 bits (306), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 102/339 (30%), Positives = 158/339 (46%), Gaps = 22/339 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  + +   L    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 101 IIPLMAVIALLFPFVATKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 160

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P+ A+++   G ++G P L+  GDYLAI TL   EI + +L  
Sbjct: 161 GLALGYQYLGLGFWAMLPLGALMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 220

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W  +T G  GI V     F     R        +  F     +  +  IF+Y VL  +  
Sbjct: 221 WMSLTGGPNGISVPAPTLFGLEFGRRAKDGGVPIHEFLGIAYNPNLKFIFIYAVLFLVVL 280

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   I   L R  I  AW  +R+++ A  SL    +  KLSAF + ++  G+AG FFA  
Sbjct: 281 LVLYIKHRLTRMPIGRAWEALREDEIACRSLGLNHVLVKLSAFMMGASTAGLAGVFFATY 340

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL      Y        
Sbjct: 341 QGFVNPTSFTFFESALILAIVVLGGMGSTIGVVLAAFVLTVAPELLRSFAEY-------- 392

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                     L  + +  +++ R   L+R+   S    +
Sbjct: 393 -------RVLLFGVLMVAMMIWRPRGLVRISRTSFAPRK 424


>gi|239940461|ref|ZP_04692398.1| branched chain amino acid transport permease [Streptomyces
           roseosporus NRRL 15998]
 gi|239986944|ref|ZP_04707608.1| branched chain amino acid transport permease [Streptomyces
           roseosporus NRRL 11379]
 gi|291443892|ref|ZP_06583282.1| branched chain amino acid transport permease [Streptomyces
           roseosporus NRRL 15998]
 gi|291346839|gb|EFE73743.1| branched chain amino acid transport permease [Streptomyces
           roseosporus NRRL 15998]
          Length = 612

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 80/347 (23%), Positives = 140/347 (40%), Gaps = 28/347 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +            T+S     ++G+ ILI+   A GL+IVVG  GLL L  V    +G
Sbjct: 268 VTLAGAFAAAAAFPFTQSNDQYATIGVNILIFATVALGLNIVVGLAGLLDLGYVAFLGVG 327

Query: 78  AYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           AY+  ++           L  W  I V A+ S   G+++G P+L+ RGDYLAI TL   E
Sbjct: 328 AYAAALVSGSPTSPFGIHLPFWQAILVGAVASMIFGVLIGAPTLRLRGDYLAIVTLGFGE 387

Query: 132 IFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           IF+  ++     +      G      +  L                 +      ++++L 
Sbjct: 388 IFRIGVLNLDGTSGPDITNGSNGISSIPNLNLFGFDFGATHSIAGFTIGRFANYFFLMLL 447

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  +   +      + I  AW  IR+++ A  ++       KL AFA+ +   G+AGA  
Sbjct: 448 VTLIVVVVFRRSAESRIGRAWVAIREDETAAEAMGINGFRTKLIAFALGATLAGLAGAVQ 507

Query: 250 AASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A     ++P+ ++F+      +  +++ V+LGGM ++S      A+L  +      M+ Y
Sbjct: 508 AHVTYTVTPEQYQFAHAVPPNSAFLLAAVVLGGMGTISGPLVGGALLFLIPAKLQFMSDY 567

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                                +AL L++  R   L+  R        
Sbjct: 568 ---------------QLFAFGLALVLLMRFRPEGLIANRRQQLEFHE 599


>gi|331697659|ref|YP_004333898.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326952348|gb|AEA26045.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 389

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 73/346 (21%), Positives = 141/346 (40%), Gaps = 29/346 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQ-KYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           R  ++  ++ ++ ++Y L L      T             +  + + A GL++VVG  GL
Sbjct: 37  RPQQWAWLVPVVVLIYALPLLNPPLLTTEPGTNFPLALFDVARFALIAIGLNVVVGQAGL 96

Query: 66  LSLNCVIAYAIGAYSYVILGSR----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           L L  V  +AIG+Y   +L S     + +     +P++  ++   G+I+G P+L+ RGDY
Sbjct: 97  LDLGYVGFFAIGSYVAALLTSPDSVLWHIPYLWTLPLAMAVTMVFGLILGAPTLRLRGDY 156

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LAI TL   EI + +    +P+        V                        V    
Sbjct: 157 LAIVTLGFGEIVRLLATIVEPLKGQVGFQSVGHPP---------GTNSEGNAIFAVSNGT 207

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             Y++ + +  +   ++  L R+ +  AW  IR+++ A   +    I  KL AF + +A 
Sbjct: 208 PWYWLCVTITIIVLFLVGNLERSRVGRAWVAIREDEDAAEIMGVATIRFKLWAFVIGAAI 267

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G++GA FA     ++   F    +++ ++ V+LGG  +   +     ++  +      +
Sbjct: 268 GGLSGALFAGQIGFVNNQKFDVPTSVLFLAAVVLGGSGNKVGVILGAFVVSYIPNRFVEL 327

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
             Y                  +  +AL ++++ R   LL  R    
Sbjct: 328 AAY---------------KYLIFGVALIVLMIFRPQGLLGARQRLL 358


>gi|149926227|ref|ZP_01914489.1| probable amino-acid transmembrane abc transporter protein
           [Limnobacter sp. MED105]
 gi|149825045|gb|EDM84257.1| probable amino-acid transmembrane abc transporter protein
           [Limnobacter sp. MED105]
          Length = 357

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 104/347 (29%), Positives = 158/347 (45%), Gaps = 17/347 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    +V   L  L   A         +    L+YVM A GL+IVVG  GLL L  +  Y
Sbjct: 11  IIGFLLVAVALAALPWVAGLIGNSWVRILNIALLYVMLALGLNIVVGFAGLLDLGYIAFY 70

Query: 75  AIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           A+GAY Y +L S +                 LSIWL+IP+ A+I+   G+++G P+L+ R
Sbjct: 71  AVGAYVYGLLASPHLTDNFETIAALFPDGLHLSIWLMIPLGALIAALFGVLLGAPTLRLR 130

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           GDYLAI TL   EI +  L       N   G    + +  +        R        V 
Sbjct: 131 GDYLAIVTLGFGEIIRLFLNNLNAPVNITNGPQGINMIEPVEIAGVRFSRTVDLFGIEVP 190

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                YY+ L +  +   I + L+ + I  AW  IRD++ A  S+       KL AFA+ 
Sbjct: 191 ALHLYYYLFLALTLIIIVICMRLQNSRIGRAWTAIRDDEIAAKSMGINTRNMKLLAFALG 250

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           ++F G+AGA F+A +  ISP+ F   E+IIV+ +V+LGGM  +  +     +L G  E+ 
Sbjct: 251 ASFGGVAGAMFSAFQGFISPESFGLMESIIVLCMVVLGGMGHIPGVILGALLLAGFPEML 310

Query: 299 CGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             +       L         +  + +  + + LV+L R + L   R 
Sbjct: 311 RQVVTPVQEFLFGTVLVDAEILRSLIYGLTMVLVMLYRPNGLWPHRK 357


>gi|291614042|ref|YP_003524199.1| ABC transporter [Sideroxydans lithotrophicus ES-1]
 gi|291584154|gb|ADE11812.1| ABC transporter related protein [Sideroxydans lithotrophicus ES-1]
          Length = 888

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 69/327 (21%), Positives = 131/327 (40%), Gaps = 27/327 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              +L   A +   +L   +    S  Y+  +   + IY +   GL I VG LG ++L  
Sbjct: 2   KRILLVNGAELLAFILLACIPLAVSNSYVLGLLTLLAIYGILLIGLDISVGYLGQVNLGH 61

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +GAY+  +    +G S+   +  S ++    G ++  P+L+  G   A+ATL  S
Sbjct: 62  AAFLGLGAYAGALCVMDFGFSMLPALLASLLVGLVFGGLLAFPALRLEGPQFALATLSFS 121

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +    L + + IT G  G+ V   L                   F +     +++ L +
Sbjct: 122 ALTVTTLNEMESITQGAQGLQVDRPL----------------LLGFHLGPQAFFWMCLVL 165

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L+   +  L  +    A+  +RD+  A  ++   +   K++AFA+ S   G+AG  +A
Sbjct: 166 LALTWVAMKNLLSSHWGRAFEALRDSPIATDAMGVGVFRHKVAAFALGSGLGGLAGGLYA 225

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            +   + P+ F +   +I++  V+LGG  SL        +++ +  L      +   S +
Sbjct: 226 FNFQFLQPNSFVYELMVILLLGVVLGGRKSLWGAFIGACLIVLLPNLLSNRTLFQAFSFI 285

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSH 337
                       L +  L  +I  R  
Sbjct: 286 G-----------LFMALLAGIISFRRQ 301


>gi|115526224|ref|YP_783135.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115520171|gb|ABJ08155.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 357

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 69/343 (20%), Positives = 145/343 (42%), Gaps = 27/343 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           +IF   +++   IL ++ V +              +Y  S+ IQI IY + A GL+I+VG
Sbjct: 21  TIFPTSMSRNFAILGIVLVCFA--------PLLLNEYWLSILIQIGIYGIAALGLNILVG 72

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G +S+     + +GA++   L +   + ++  IP++ +++   G+I GLP+ + +G Y
Sbjct: 73  FTGQISIGHAAFFLLGAFTSAYLSNHLPIPVFFAIPLAGVVTALVGLIFGLPAARLKGLY 132

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           L IATL    I  +   + +  T G           F                       
Sbjct: 133 LVIATLAAQYILIDFFSRAEWFTGGSVPASANPFSIFGYVLRGDRQY------------- 179

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +YV+L    +S  ++  L R+    A   +RD+  +   +   +   +  +F +++ F
Sbjct: 180 --FYVVLAYVLVSYLLVTNLMRSRDGRALVAVRDHYLSAEIMGINLTKYRTLSFGLAAFF 237

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AGA +A  +  +S + F    +I+ ++++I+GG  S+      TA ++ + E    +
Sbjct: 238 AGIAGALYAHYQLVVSNEGFGIERSILFLAMIIIGGTGSIMGTLMGTAFVVLLPEAMEWI 297

Query: 302 N----FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +        +  L  + +        + + +   ++     L 
Sbjct: 298 SMELKGGAIDRALSLNTNLTFLREISIGLIIIAFLVFEPDGLA 340


>gi|119718660|ref|YP_925625.1| ABC transporter related [Nocardioides sp. JS614]
 gi|119539321|gb|ABL83938.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter ATP-binding protein 1,
           HAAT family [Nocardioides sp. JS614]
          Length = 603

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 73/343 (21%), Positives = 132/343 (38%), Gaps = 31/343 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
               L     +   +L +         Y  +M I  LI+ + A GL+I+ G  G +SL  
Sbjct: 2   KPIWLGRAVALAAGVLLVAYPMLSDDIYYQNMIILSLIFAVGASGLNIISGFAGYISLGQ 61

Query: 71  VIAYAIGAYSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                +G Y+  +L  RY   S WL +P+  +++    +I+G  SL+ RG    I T+  
Sbjct: 62  GAFLGLGGYTIGVLAGRYPDASPWLWVPLGGIVAAGVALILGFVSLRSRGPAFVIITVAF 121

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
             + Q I + W  +TNG  G+ +    +                          YYVL+ 
Sbjct: 122 LFLVQVIAVNWVSLTNGTTGLTLPLPTWDRDIMNWP-----------------FYYVLVA 164

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L   +  W+RRT +      IR+++    ++   +   K+ AF  S+ F+GMAGA +
Sbjct: 165 ILALQLLMTWWIRRTKLGMGLIAIREDETKAATIGINLPVQKIIAFMASALFVGMAGAVY 224

Query: 250 AASRDRISP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                 I P  MF    ++ ++  +++GG  +L        ++  + E+           
Sbjct: 225 GYYLTFIDPRGMFSILISVQLVLSMLIGGKATLWGPVIGAFLVEWLNEMANN-------- 276

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               D         L    L  V++     ++     +    R
Sbjct: 277 ----DWGGGNTRLFLFGGLLMAVVIFLPKGIIPAIESALSWRR 315


>gi|311108036|ref|YP_003980889.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310762725|gb|ADP18174.1| inner-membrane translocator 49 [Achromobacter xylosoxidans A8]
          Length = 593

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 65/331 (19%), Positives = 135/331 (40%), Gaps = 25/331 (7%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L+    +       +  ++ + + ++   +   +IV G  G LSL   + Y IG Y+
Sbjct: 14  LILLISMFLVPVVMGTPFWTNLFVLLFVFSALSVAWNIVGGYAGQLSLGHAVFYGIGGYT 73

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +L   +G+S W  +   A+ISGA  +++  P+L+ RG + A+AT+ + E+ + ++I  
Sbjct: 74  ATLLTQNFGISPWFGMLAGAVISGAVAILISYPTLRLRGPFFALATIAILEVVRLLVIHE 133

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           +  T G +GI +   + +     R                +    +  G+  L      +
Sbjct: 134 ESWTGGSSGISLPLNIGWTWIVFREK--------------VNYVIIAFGLFLLVTWASWY 179

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +R++ I +    IR+ + A  ++    +  K+ A  VS+    + G F       + P  
Sbjct: 180 IRKSRIGHYLIAIREREDAALAVGIHTVRMKIIAAVVSAMLTSIIGTFHITYLTFVDPSS 239

Query: 261 -FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F    +I V    ++GG+ +++     T +++ + EL  G      N +          
Sbjct: 240 AFSLELSIQVAMFALIGGLGTVAGPIAGTFLVLPIAELARGWLSSVGNGM---------- 289

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           H  +  + L  V+L     L     P+    
Sbjct: 290 HGLIYGLILVAVVLTIPRGLAGAFGPTIERW 320


>gi|294812035|ref|ZP_06770678.1| Branched chain amino acid transport permease [Streptomyces
           clavuligerus ATCC 27064]
 gi|326440572|ref|ZP_08215306.1| ABC transporter integral membrane subunit [Streptomyces
           clavuligerus ATCC 27064]
 gi|294324634|gb|EFG06277.1| Branched chain amino acid transport permease [Streptomyces
           clavuligerus ATCC 27064]
          Length = 585

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 79/359 (22%), Positives = 139/359 (38%), Gaps = 28/359 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +RL+        + ++           T++      + + ILI+   A GL+IVVG  GL
Sbjct: 213 VRLSALTAKYRQVTMIAAFTAAAAFPFTQNTDTYTLIAVNILIFATVALGLNIVVGLAGL 272

Query: 66  LSLNCVIAYAIGAYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           L L  V    +GAY+  ++              W  +   A++S   G+I+G P+L+ RG
Sbjct: 273 LDLGYVAFLGVGAYTAALVSGSTASAFDVQFPFWASVLTGAVVSLIFGVIIGAPTLRLRG 332

Query: 120 DYLAIATLIMSEIFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           DYLAI TL   EIF+  +     ++      G      +  L     +           +
Sbjct: 333 DYLAIVTLGFGEIFRIAMGNLDGVSGPHITNGPNGIPNIPDLEFFGYNFGEPHTVLGVEL 392

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 Y ++L    L   +      + I  AW  IR+++ A  ++       KL AFA+
Sbjct: 393 GSYANYYLLMLLAMVLVVVVFTRAENSRIGRAWVAIREDETAATAMGINGFRVKLIAFAL 452

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILI 292
            +   G+AG   A  +  + P+M++F+      +  +++ VILGGM ++S       +L 
Sbjct: 453 GATLAGVAGTVQAHVQHTVVPEMYQFAGPVPPNSAFLLAAVILGGMGTVSGPLLGATLLY 512

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            +      +  Y                     IAL +++  R   L+  R        
Sbjct: 513 MIPAKLQFLQDYQLLG---------------FGIALIVLMRFRPEGLIANRRAQLEYHE 556


>gi|323700060|ref|ZP_08111972.1| inner-membrane translocator [Desulfovibrio sp. ND132]
 gi|323459992|gb|EGB15857.1| inner-membrane translocator [Desulfovibrio desulfuricans ND132]
          Length = 396

 Score =  122 bits (305), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 102/326 (31%), Positives = 160/326 (49%), Gaps = 29/326 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++  ++    +    +++Y   + I +LIYV    GL++VVG  GLL L  +  Y +GA
Sbjct: 91  LLLGIVMAGAIVYPLVTERYAHDVAISVLIYVCLGLGLNVVVGLAGLLDLGYIAFYGVGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y IL   YGLS WL +P++A I+   G I+G P+L+ RGDYLAI TL   EI + +L 
Sbjct: 151 YTYAILSINYGLSFWLCLPIAAFIAAIAGCIIGYPTLRMRGDYLAIVTLGFGEIVRLVLN 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  +TNG  GI    R    G   RS                 MYYV+LG+  ++   +
Sbjct: 211 NWMSLTNGPNGILSIPRPELFGYEFRS--------------LSSMYYVILGLAVVTILAV 256

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L  + +  AW  IR+++ A   +       KL A+A+ + F G AGAFFAA    + P
Sbjct: 257 YRLNYSRVGRAWEAIREDETAAELMGVNTFLLKLLAYAMGATFAGFAGAFFAARMKFVGP 316

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F F E+ +V+++VILGGM S+  +      L+ + E+      Y              
Sbjct: 317 ESFTFLESAMVLAMVILGGMGSIPGVILGVLALVALPEVFREFELY-------------- 362

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRT 344
               +   A+ L++L+R   +   + 
Sbjct: 363 -RMLVFGGAMTLMMLIRPAGIWPAKR 387


>gi|148260858|ref|YP_001234985.1| ABC transporter related [Acidiphilium cryptum JF-5]
 gi|326404252|ref|YP_004284334.1| putative ABC transporter permease/ATP-binding protein [Acidiphilium
           multivorum AIU301]
 gi|146402539|gb|ABQ31066.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter ATP-binding protein 1,
           HAAT family [Acidiphilium cryptum JF-5]
 gi|325051114|dbj|BAJ81452.1| putative ABC transporter permease/ATP-binding protein [Acidiphilium
           multivorum AIU301]
          Length = 599

 Score =  122 bits (305), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 71/324 (21%), Positives = 143/324 (44%), Gaps = 29/324 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   +L+   L   +   Y  ++ I  L Y + A GL++++G  G +SL     + IGA
Sbjct: 11  FIALLVLIPFLLPGGRLGSYYLTLLILSLSYAVAALGLTVLLGYSGQISLAQAAFFGIGA 70

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ IL   + +  W     +  ++   G+ +G  SL+    YLA+ T+    I + +L 
Sbjct: 71  YTFSILAVNHHIGYWSAALAAVAVTTGFGLFLGAISLRLASHYLALVTIGFQIITELVLN 130

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  +T+G  GI    R    G  + S   F              Y++ + +  L++ ++
Sbjct: 131 NWNAVTDGADGISNIPRPSLFGYAINSDHGF--------------YFISVAVLVLASYVV 176

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             LR + +  A   +R+++ A  +   ++   K+ AFAVS+A   M G  +A+    ISP
Sbjct: 177 FRLRHSRLGGALFALREDEIAASANGISLFRTKVLAFAVSAALAAMGGILYASGSLYISP 236

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           ++F F +++   ++ ++GG  S+        ++  + E+   ++ YY             
Sbjct: 237 NVFNFYQSVSFFAMALVGGQASIVGTTLGAGLITFLPEVLRFLHAYYIA----------- 285

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
               +  + + +V+L     L  L
Sbjct: 286 ----VYGVLVVVVVLFMPEGLYGL 305


>gi|257095981|ref|YP_003169622.1| ABC transporter-like protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257048505|gb|ACV37693.1| ABC transporter related [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 590

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 117/321 (36%), Gaps = 22/321 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +   +  L L      ++  ++   I +Y + A GL ++ G  GL S        +GAY+
Sbjct: 11  LLVFMAALVLAPLVLPEFYVTLLNYIGLYAIVALGLVMLTGVGGLTSFGQAAFVGLGAYT 70

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
              L + +G+S WL +P   +++ A  + +GL +L+  G +L + T+        +    
Sbjct: 71  SAYLTTVHGVSPWLTLPAGLLVTAAVAVSLGLVTLRLSGHFLPLGTIAWGISLYYLFGNL 130

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +  G  GI     L      ++S   F              +Y++  +  L       
Sbjct: 131 AAL-GGHTGITGIPSLQLFDLELKSGREF--------------FYLIWAVLLLIVLATRN 175

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  +    A R +R       ++      AK+  F V++ +  ++G  +A  +  ++P  
Sbjct: 176 LLDSREGRAIRALRGGSLMAEAMGVNTPRAKIVIFTVAALYASVSGWLYAHLQRFVNPTP 235

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F  ++ I  + + ++GG+  +        ++  + +               F        
Sbjct: 236 FSLTQGIEYLFMAVVGGVAHVWGAIVGAGLITILKQWLQDWLPRLVGESGNF-------E 288

Query: 321 TTLMVIALFLVILMRSHSLLR 341
             +  + +  V+      +  
Sbjct: 289 VIVFGLLMIFVLQRARDGVWP 309


>gi|145588544|ref|YP_001155141.1| ABC transporter related [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145046950|gb|ABP33577.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
           / amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 643

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 71/304 (23%), Positives = 133/304 (43%), Gaps = 16/304 (5%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  ++    L       Y   +   ILIY +  +GL IVVG +G +SL     + IG+Y
Sbjct: 10  LLIAIVGLFCLPLFIHNPYYIHLAETILIYTILLFGLDIVVGYVGQVSLGHAALFGIGSY 69

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  I+    GL IW  IP S +++   G ++ LP+LK  G YLA+ TL    I Q ++ +
Sbjct: 70  TAGIMFFHLGLPIWATIPASVIVTACFGGLLALPALKVVGPYLAMVTLAFGTIAQILINE 129

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +T G  GI +                           +   ++++  +  L+  +I 
Sbjct: 130 MTWLTEGPLGIKLTRPELMGVPM----------------TKAEYFWLVSIVTILALIVID 173

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
              ++ +  A+  +RD+  A   +  ++   K+ AF +S+ F G+AG  +A S   ISP+
Sbjct: 174 RFVKSQMGRAFEALRDSPVACDCMGVSVYRFKVIAFVISAGFAGLAGCLYAYSEQYISPN 233

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            +     ++ +  +I+GG  S        AI++ + +L   +N +   + +         
Sbjct: 234 TYNNELAVLFLLGIIMGGRKSRLGAVIGAAIIVLLPKLLDDINAFRIVASIIAIVVTAGA 293

Query: 320 HTTL 323
              L
Sbjct: 294 ILAL 297


>gi|170742762|ref|YP_001771417.1| ABC transporter-like protein [Methylobacterium sp. 4-46]
 gi|168197036|gb|ACA18983.1| ABC transporter related [Methylobacterium sp. 4-46]
          Length = 840

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 60/310 (19%), Positives = 112/310 (36%), Gaps = 30/310 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
              ++++ +   GL+I+VG  GL+S        +GAY+  I          +   V A+ 
Sbjct: 33  ATDVVVFAVACLGLNILVGQTGLVSFGHGAFLGLGAYAAAISQRALFPGGLVAPAVFALA 92

Query: 103 SGACGMIMGLPSLKFRG-DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
             A   ++    +  R   Y ++ TL +S +   +  +W  +T G++G     R      
Sbjct: 93  FVALAALLVGLLILRRRGVYFSLLTLALSALTFTVAYRWTALTGGESGFGGVVRPS---- 148

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                          +      Y  +  + F     +  LRR+A+ +    IR+N++   
Sbjct: 149 ----------LLGIDLDAPATWYACVAVVGFAVLCGLARLRRSAVGSVLEAIRENEQRAR 198

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
            L       KL AF +S+A  G+AG     +    S +    + +  ++++V++GGM SL
Sbjct: 199 FLGYPTARYKLLAFTISAAVTGLAGVLEVFTHRFASAEPLGTAFSGELLAMVVIGGMRSL 258

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +  A      I   EL       +                    +     IL     L+ 
Sbjct: 259 AGPAIGALFFILFRELLSIWTGDW---------------LFWFGLLFIGFILFSPDGLVG 303

Query: 342 LRTPSNFLER 351
           +      L R
Sbjct: 304 IGRRVLRLIR 313


>gi|154245563|ref|YP_001416521.1| ABC transporter related [Xanthobacter autotrophicus Py2]
 gi|154159648|gb|ABS66864.1| ABC transporter related [Xanthobacter autotrophicus Py2]
          Length = 616

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 66/324 (20%), Positives = 134/324 (41%), Gaps = 25/324 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            +  L L + + A     ++  + + I ++   +   +I+ G  G LSL   + Y +G Y
Sbjct: 35  ALIALSLLVIIPAWSGSTFMVHVFVTICVFGALSTAWNILGGYAGQLSLGHTVFYGLGGY 94

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  +L + +GLS W+ +   A ++    + +G P  + RG + ++AT+   E+ + + I 
Sbjct: 95  TAALLLTHFGLSPWIGMIAGAALAALVSLGIGYPCFRLRGPFFSLATIAFLEVVRLLSIH 154

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           +  +T G AG+ V  ++ +     R                I   Y+  G+  L  ++  
Sbjct: 155 FNGVTGGSAGLVVPLQIGWPWMIFREK--------------INYLYIAFGLLVLCLAVSY 200

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +R + +  A   +R+   A  +    I   KL A A+S+A   + G F A     + P 
Sbjct: 201 AIRHSRLGYALTAVRERDSAAQAAGIDINGVKLWAMAISAALTALVGTFHAMYMTFLEPA 260

Query: 260 M-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F  +  I +    ++GG+ +++     T +++ + EL  G              S N 
Sbjct: 261 TLFSLATAIEIAMFALIGGLGTVAGPLLGTVLVVPLAELARG----------WLGASANG 310

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
            H  +    L ++ L     L+  
Sbjct: 311 LHGFVYGSVLVIITLTLPGGLVGT 334


>gi|56477219|ref|YP_158808.1| putative ABC transport protein [Aromatoleum aromaticum EbN1]
 gi|56313262|emb|CAI07907.1| putative ABC transport protein [Aromatoleum aromaticum EbN1]
          Length = 366

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 92/327 (28%), Positives = 155/327 (47%), Gaps = 5/327 (1%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  + +   L A    +    +    L+YVM A GL++VVG  GLL L  +  YA+GAY
Sbjct: 22  LIVIVAIAAPLVAVLFGRTWVRVLDFALLYVMLALGLNLVVGFAGLLDLGYIAFYAVGAY 81

Query: 80  SYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           +   L S +    L  W+++PV+A  +   G+++G P L+ RGDYLAI TL   EI +  
Sbjct: 82  TAAFLASPHFGVHLPFWIVLPVAAGFAALAGIMLGFPVLRLRGDYLAIVTLGFGEIVRIF 141

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY-VLLGMCFLSA 195
           L       N   G    + L  L      L R      +  I  +F+YY   L     S 
Sbjct: 142 LNNLNYPVNITNGPQGINALDPLVLFGWDLSRNLEITENLSINSLFLYYYFFLACVAGSI 201

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             I  L+ + +  AW  +RD++ A  ++       KL AF++ + F G+AG  F A +  
Sbjct: 202 VFIQRLQVSRVGRAWAAMRDDELAAKAIGINTRNLKLLAFSLGATFGGVAGELFGAFQGF 261

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-FDC 314
           +SP+ F   E+I V+++V+ GGM +++       IL  + E+   +      +L      
Sbjct: 262 VSPESFSLMESIAVLTMVVFGGMGNVAGAIAGALILSALPEILRHLAVPVQQTLFGTVLL 321

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
              +    L+ +A+ L++L++   L+ 
Sbjct: 322 DPEVLRMLLLSLAMILMMLLKPAGLIP 348


>gi|296101744|ref|YP_003611890.1| branched-chain amino acid transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295056203|gb|ADF60941.1| branched-chain amino acid transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 424

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 100/339 (29%), Positives = 158/339 (46%), Gaps = 22/339 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+   +         + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 97  VIPLAIALAICFPFVATKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 156

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+++ A G ++G P L+  GDYLAI TL   EI + +L  
Sbjct: 157 GLALGYQYLGLGFWSMLPLAAIMAAAAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 216

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+      +F     R           FF    +  +  IF+Y VL  +  
Sbjct: 217 WLTFTGGPNGVSAPPPTFFGLEFGRRAKEGGVPFHEFFHLTYNPNMKFIFIYAVLFLVVL 276

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   I   L R  I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA  
Sbjct: 277 LVLYIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGIAGVFFATY 336

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL      Y        
Sbjct: 337 QGFVNPTSFTFFESALILAIVVLGGMGSTLGVVLAAFVLTVTPELLRSFAEY-------- 388

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                     L  + + ++++ R   L+R+      + +
Sbjct: 389 -------RVLLFGMLMVVMMIWRPRGLIRINRSGFAVRK 420


>gi|293602423|ref|ZP_06684869.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292819185|gb|EFF78220.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 640

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 151/377 (40%), Gaps = 53/377 (14%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            K L LL  V  +     +    +  Y   +   I+IY +  +GL IVVG  G +SL   
Sbjct: 1   MKPLHLLLSVVAIACLAAVPLGVTNTYYLHLIETIMIYSILLFGLDIVVGYTGQVSLGHA 60

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             + IG+Y   +L     + IW+++P + +I+ A G ++ LP+L+  G YLA+ TL    
Sbjct: 61  GLFGIGSYVAGVLFFHLQMPIWVILPAAILIAAAFGAVLALPALRVTGPYLAMVTLAFGT 120

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I Q ++ +   +T G  GI +                        ++ +   ++++  + 
Sbjct: 121 IIQILINEMTFMTEGPLGIKIPKPS----------------IGGHILTKSEYFWLVGALL 164

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +S  ++  + ++ +  ++  +RD+  A   +  ++   K+ AF +S+ F G+AGA ++ 
Sbjct: 165 VISLIVVHRILKSHLGRSFEALRDSPIASDCMGVSVYRHKVFAFVISAGFAGLAGALYSY 224

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           S   ISP+ + F   I+ +  +I+GG  S +      +I++ + ++   +  +   +L  
Sbjct: 225 SEQYISPNTYNFELTILFLLAIIMGGRKSRTGALLGASIIVLLPKMLDDIGTFRLIALAV 284

Query: 312 -------------------------------------FDCSFNMRHTTLMVIALFLVILM 334
                                                +  +      T+    +  V+  
Sbjct: 285 AVLVTVGSIVAVSKGRAEPRRVVVPVAGTIVLAVFSYWLEAVTDWRLTIFGAMILFVVYY 344

Query: 335 RSHSLLRLRTPSNFLER 351
               ++       F  R
Sbjct: 345 LPDGIVGFVRNLFFSNR 361


>gi|226314578|ref|YP_002774474.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599]
 gi|226097528|dbj|BAH45970.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599]
          Length = 342

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 79/323 (24%), Positives = 141/323 (43%), Gaps = 24/323 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +   L L +        +Y  S+GI I +  +   GL +V+G  G +SL     + IGAY
Sbjct: 12  IGIYLFLMVLFPFVMPDEYYRSVGIIIGLQAIVTIGLCLVMGLAGQISLGQAAFWGIGAY 71

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  +L ++YGL  ++ +  +A++ G    I+G      +G YLA+ATL    I Q  + +
Sbjct: 72  TSAVLTTKYGLPPFIGLIAAAIVPGLFAFILGRAIAGLQGYYLAMATLAFGYIVQIGITE 131

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W+P+T G  G+    ++ F                     E+ MY+++ G+        L
Sbjct: 132 WEPVTGGANGMISIPQMTFF-----------------GGSELSMYFLIWGVVTCVLLFSL 174

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  + +  A+R I  ++ A  S+   +   KL+AF VS  F G++G  +A     + P 
Sbjct: 175 NLLNSRVGRAFRAIHKSEIAATSMGIDVRKFKLNAFVVSGMFAGISGGLYAHYMGILDPQ 234

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F   E+I  +++V++GGMTS+      T ++  + E    ++                 
Sbjct: 235 PFGLHESIKFLTMVVIGGMTSIWGALVGTILIGFISEGLVLLSE-------VVPGLQGDV 287

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
            T +    L L I+     L+  
Sbjct: 288 DTIVFGAILVLFIMFMPEGLVPR 310


>gi|329911898|ref|ZP_08275625.1| ABC-type branched-chain amino acid transport system
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327545776|gb|EGF30907.1| ABC-type branched-chain amino acid transport system
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 587

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/323 (15%), Positives = 121/323 (37%), Gaps = 22/323 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+  ++    L    + ++  ++   I +Y + A GL ++ G  G+ S        +GAY
Sbjct: 7   VLLFVIFLALLPVLPTPEFWITLANYIGLYAIVALGLVLLTGIGGMTSFGQAAFVGLGAY 66

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +   L + +GLS WL +     I+      +G  +++  G YL + T+        +   
Sbjct: 67  ATAYLTTHFGLSPWLGLLAGLGITALAAFALGAITMRLSGHYLPLGTIAWGLSLFYLFGN 126

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
            + +     G+     +   G T++S                 ++Y++  +  ++   + 
Sbjct: 127 LEFL-GKYDGLNGIPAIELFGLTLQS--------------GRAIFYLIWAVVIVALLALQ 171

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  +    A R +  +     ++     + K+  F +++    ++G  +A  +  ++P 
Sbjct: 172 NLLDSRSGRAMRALNGSGLMAEAMGVNTTWMKIVCFVIAALLACISGWLYAHMQRAVNPT 231

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F  +  I  + + ++GG   +      +A+L  + +    +      S   F       
Sbjct: 232 PFGLNAGIEYLFMAVVGGAGHVWGALLGSALLTILKDQLQSILPKLLGSNGNF------- 284

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
              +  + + L++      L  L
Sbjct: 285 EMIVFGVMMVLLLQRARSGLWPL 307


>gi|288959988|ref|YP_003450328.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288912296|dbj|BAI73784.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 357

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 70/343 (20%), Positives = 139/343 (40%), Gaps = 27/343 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           +IF  R ++   IL ++ ++               +Y  S+ IQI    + A GL+I+VG
Sbjct: 21  TIFPTRTSRNFAILGVVLLLAC--------PAFMDRYWLSLLIQIGYLGIAALGLNILVG 72

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G +S+     +  GA++     +  G+ + L IP++ M++   G++ G+P+ + +G Y
Sbjct: 73  FTGQISIGHSAFFGFGAFASAWASNSLGVPVALAIPLAGMMTTLVGLLFGMPAARLKGLY 132

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LAIATL    I Q+   +    T G AG                                
Sbjct: 133 LAIATLAAQYILQDFFARADWFTGGTAGTIAEPLTILGFAFDTDER-------------- 178

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +YV L    +   +   L RT    A   +RD+  +   +   +   +  +F +S+ +
Sbjct: 179 -FFYVALVALVVMYILATNLMRTRDGRALVAVRDHYLSAEIMGINLTKYRTMSFGISAFY 237

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+ GA +A     +S + F    +I  + ++I+GG+ S+      TA ++ + E    +
Sbjct: 238 AGIGGALYAHYLQFVSVEGFTILFSIQFLGMIIIGGLGSIMGTLMGTAFMVFLPEAMQAL 297

Query: 302 ----NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
               +    ++ L    +        + + + L ++     L 
Sbjct: 298 TKLVSGTAIDTALNLKDNIAFLREMSIGLVIILFLVFEPDGLA 340


>gi|56421559|ref|YP_148877.1| branched amino acid ABC transporter permease [Geobacillus
           kaustophilus HTA426]
 gi|56381401|dbj|BAD77309.1| branched amino acid ABC transporter (permease) [Geobacillus
           kaustophilus HTA426]
          Length = 348

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 69/324 (21%), Positives = 132/324 (40%), Gaps = 20/324 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +V   +            Y+ S  I I +Y + + G+++++G  G +SL     Y IG
Sbjct: 9   LLLVGAAVWLGLPWLVFGNNYVLSTLILIGLYALVSTGMTLLMGYAGQISLGQAAFYGIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+   L +  G   WL +   A+++    +++G+P  + R  YLA+ATL    I     
Sbjct: 69  AYASAYLTAHAGWPSWLALAAGAVLAALVALVVGIPVFRLREHYLALATLGFGVIMFTFF 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +WK IT G  G +    +              R     +  ++  YY++          
Sbjct: 129 KEWKEITGGLNGFFGIPPI--------------RIAGVPLQSDLQFYYLVSLFVLAGLWF 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              + R+ +  A R I  ++ A  SL   I+  KL  F +S+ +  +AG+ +A     I+
Sbjct: 175 AHNIVRSRVGRALRAIHGSEVAASSLGVNIMKYKLQIFMLSAVYASIAGSLYAHYVTFIN 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           PD+F    +I  + +V++GG  S+       A+ + + E    +      +         
Sbjct: 235 PDLFGIVPSIYFLIMVVIGGTASVWGGLIGAAVYVCLGEWLKAVVPLLLPNAGG------ 288

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                   + L ++++   + L  
Sbjct: 289 EFEIVFFGLLLVVMLIYMPNGLTG 312


>gi|196249320|ref|ZP_03148018.1| inner-membrane translocator [Geobacillus sp. G11MC16]
 gi|196211077|gb|EDY05838.1| inner-membrane translocator [Geobacillus sp. G11MC16]
          Length = 354

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 66/315 (20%), Positives = 125/315 (39%), Gaps = 20/315 (6%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
             F        Y+ S  I I +Y + + G+++++G  G +SL     Y +GAY+   L +
Sbjct: 24  LGFPWLVAGNNYLLSTLIIIGVYALVSTGMTLLMGYAGQISLGQAAFYGVGAYTSAYLTA 83

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G   WL + V A+++     ++G+P  + R  YLA+ATL    I   +  +W+ IT G
Sbjct: 84  HAGWPPWLAMAVGAVLAALVAFVVGIPVFRLREHYLALATLGFGVIMFTLFKEWEAITGG 143

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             G +    +                    +  +I  YY++             + R+ +
Sbjct: 144 LNGFFGIPPIS--------------VLGMSLQTDIQFYYLVWLFVLAGLWFAHNIVRSRV 189

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A R I  ++ A  SL   I   KL  F +S+ +  +AG+ +A     I+PD+F    +
Sbjct: 190 GRALRAIHGSEVAASSLGVNITKYKLQIFMLSAMYASVAGSLYAHYVTFINPDLFGIVPS 249

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I  + +V++GG   +       A+ + + E    +                        +
Sbjct: 250 IYFLIMVVIGGTAGVWGGLVGAAVYVCLGEWLKAVVPILMPDAGG------EFEIVFFGL 303

Query: 327 ALFLVILMRSHSLLR 341
            L ++++     L  
Sbjct: 304 LLIIMLIYMPSGLTG 318


>gi|158929985|gb|ABW82966.1| ABC transporter [uncultured bacterium pEAF66]
          Length = 403

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 93/377 (24%), Positives = 161/377 (42%), Gaps = 40/377 (10%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F +  ++      +  V+  LL+F F        ++  +    L+Y+M A GL+IVVG  
Sbjct: 6   FDVEHDRKKAFTSMGVVLVLLLIFPFFAQQFGNSWV-RIIDMALLYIMLALGLNIVVGFA 64

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRY--------------------------------GLS 91
           GLL L  +  +A+GAY   +L S                                   LS
Sbjct: 65  GLLDLGYIAFFAVGAYMTGLLASPQFAALLESVVYQYPVLGEWLIAVMGPEITQTGIHLS 124

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           +WL++P++A  +G  G ++G P+LK RGDYLAI TL   EI +  +       N   G  
Sbjct: 125 VWLIVPLAAATAGLFGALLGAPTLKLRGDYLAIVTLGFGEIIRIFMNNLNDPINFTNGPQ 184

Query: 152 VADRLYFLGTTVRSLIRFFR------FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
             + +  +     SL                +      Y++ L +C     +   L+ + 
Sbjct: 185 GINNIDPIRIFGTSLSGEAGSKATVVIGGFSMPSVNAYYFLFLFLCIAIVFVTTRLQHSR 244

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +  AW  IR+++ A  ++       KL AFA+ ++F G+AGA FAA +  +SP+ F  +E
Sbjct: 245 LGRAWVAIREDEIAAKAMGINTRNVKLLAFAMGASFGGVAGAMFAAFQGFVSPESFSLTE 304

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-FDCSFNMRHTTLM 324
           +I V+++V+LGG+  +  +     +L  + E+   +       L         +    L 
Sbjct: 305 SIAVLAMVVLGGIGHIPGVILGGVLLAALPEVLRHVVEPIQMKLFGAVLLESEVLRQGLF 364

Query: 325 VIALFLVILMRSHSLLR 341
            +AL  ++L +   L  
Sbjct: 365 GLALVGMMLYKPAGLWP 381


>gi|311109339|ref|YP_003982192.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310764028|gb|ADP19477.1| inner-membrane translocator 66 [Achromobacter xylosoxidans A8]
          Length = 640

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 69/312 (22%), Positives = 143/312 (45%), Gaps = 16/312 (5%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            K L LL  +  +     +    +  Y   +   I+IY +  +GL IVVG  G +SL   
Sbjct: 1   MKPLHLLLSIVAVACLAAVPLGVTNTYYLHLIETIMIYSILLFGLDIVVGYTGQVSLGHA 60

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             + IG+Y   +L     + IW+++P + +I+ A G ++ LP+L+  G YLA+ TL    
Sbjct: 61  GLFGIGSYVAGVLFFHLQMPIWVILPTAILIAAAFGAVLALPALRVTGPYLAMVTLAFGT 120

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I Q ++ +   +T G  GI ++                       V+ +   ++++  + 
Sbjct: 121 IIQILINEMTFMTEGPLGIKISKPAIAGH----------------VLTKSEYFWLVAALL 164

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            LS  ++  + ++ +  ++  +RD+  A   +  ++   K+ AF +S+ F G+AGA ++ 
Sbjct: 165 VLSLIVVHRILKSHLGRSFEALRDSPIASDCMGVSVYRHKVFAFVISAGFAGLAGALYSY 224

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           S   ISP+ + F   I+ +  +I+GG  S +      +I++ + ++   ++ +   +L  
Sbjct: 225 SEQYISPNTYNFELTILFLLAIIMGGRKSRTGALLGASIIVLLPKMLDDISTFRLIALGV 284

Query: 312 FDCSFNMRHTTL 323
                      +
Sbjct: 285 AILVTVGSVIAI 296


>gi|51893498|ref|YP_076189.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM
           14863]
 gi|51857187|dbj|BAD41345.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 619

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 69/323 (21%), Positives = 132/323 (40%), Gaps = 29/323 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+     + L L       Y   +     I+ + A  L+++ G+ G +SL      A+GA
Sbjct: 323 ALPAAGAVALALPLVVRNGYWLQVLATAWIFGLLAISLNLIAGTAGQISLGHAGFLALGA 382

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL +R      L + V+ +I+ A G+++  P+L+ RG YLA+AT+ + +    + +
Sbjct: 383 YASAILTTRLQWPFLLSLAVAPVIAAAVGVVLCYPALRLRGQYLAVATIGLGQGIALVAL 442

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  +T G  GI                          +      Y++ L +      + 
Sbjct: 443 NWTALTRGPLGISNIAPP--------------GLFGVEITSAAGFYWLTLTLLLGGIWVA 488

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L  + +  A R +R+++ A  +    +   K  AF +S+   G+AG   A +   I+P
Sbjct: 489 ERLSGSYLGRALRAVREDEVAARAYGVGLERYKSIAFGLSAFIAGLAGVLLAHAYTYIAP 548

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           D F  + ++ V+++V+LGG+ +          LI + E    +  Y              
Sbjct: 549 DTFTHAMSLQVLTMVVLGGLDNTIGAVAGALALIVIPESARFLAEY-------------- 594

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
               +  + L +++  R   LL 
Sbjct: 595 -RFLVYGLLLLVMLRFRPRGLLS 616



 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 100/309 (32%), Gaps = 25/309 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A G++ + G   +++      Y +GA+   +  +  GL +   + +
Sbjct: 19  LINGLVVGNLYALTAVGITQIYGVANVINFAHGSLYMVGAFVGWMAVTWLGLPLLPTLLL 78

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + S   G+ +   +++          L+ +     +L +   +  G            
Sbjct: 79  VLVASALLGLAVERVAIRPFAGSGRTVLLLTTIAAGLVLEQAAQLIWGPETKAFHTPFAD 138

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   V                      +L      + ++ L+L+R+ +  A R    +++
Sbjct: 139 VRVRV-----------GGGFLSSLDLVILAVGLTTALALWLFLKRSRLGWAVRATAQDRE 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +      +FA++ A  G++G         + P M  FS ++   +  +LGG+
Sbjct: 188 AALQMGVDVNQVSRVSFAMAGALAGVSGLLVGLYYHSVYPTM-GFSASLKGFTAALLGGL 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L     L        +  L+       +                R + 
Sbjct: 247 GNIPGALVGAYLLGTAESLAVAWLGSTWRDLVGIGLLLGVLL-------------FRPNG 293

Query: 339 LLRLRTPSN 347
           L        
Sbjct: 294 LFAAARALL 302


>gi|154249222|ref|YP_001410047.1| inner-membrane translocator [Fervidobacterium nodosum Rt17-B1]
 gi|154153158|gb|ABS60390.1| inner-membrane translocator [Fervidobacterium nodosum Rt17-B1]
          Length = 562

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 69/318 (21%), Positives = 133/318 (41%), Gaps = 33/318 (10%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  ++L           +I ++   + I+ + + GL+I++G  G +S+      +IGAY+
Sbjct: 1   MIWIILAFIPFILLKSSFIITILSLVGIFSIASLGLNIIMGYSGQISIGHAAFMSIGAYT 60

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +L   Y + I   + +  +++   G+++G P+L+  G YLAIAT+      + +    
Sbjct: 61  STLLVMHYNVPIIFGVILGGLVAFFLGLLIGFPALRLSGFYLAIATMGFVVAVEQLFSTL 120

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T G AGI      +   + V                    Y ++L   F++  I   
Sbjct: 121 EHVTGGHAGIRGIPFPHIWNSDVEK------------------YLIVLAFVFITYVISDR 162

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  +     W  IR+N+ A   +   +   K+ AFA+ S F G+AGA +A     I+P  
Sbjct: 163 LINSKTGRGWMAIRENEIAASVVGINVARYKVLAFAIGSMFAGIAGALYAHVIGYIAPSD 222

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F  + ++ +++I ++GGM SL      + I + +  L    +                  
Sbjct: 223 FGIARSLDLLAISVIGGMASLDGPYYGSIIYVALPFLFSRTHLSMS-------------- 268

Query: 321 TTLMVIALFLVILMRSHS 338
             +  I L  V+L     
Sbjct: 269 -IIFGIILIFVVLFMPFG 285


>gi|124266316|ref|YP_001020320.1| putative transport system permease [Methylibium petroleiphilum PM1]
 gi|124259091|gb|ABM94085.1| putative transport system permease protein [Methylibium
           petroleiphilum PM1]
          Length = 368

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 96/343 (27%), Positives = 155/343 (45%), Gaps = 17/343 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +  V   LLL   L A         +    L+YV+ A GL+IVVG  GLL L  +  Y
Sbjct: 6   LVVFLVAGALLLLTPLIAQYFGNAWVRIIDIALLYVLLALGLNIVVGYAGLLDLGYIAFY 65

Query: 75  AIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           A+GAY + +L S +                   +W +IP++  ++G  G+I+G P+LK R
Sbjct: 66  AVGAYLFGLLASPHLADHFAAVRAMFPYGMHTPLWFVIPLALAVAGTAGVILGAPTLKLR 125

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           GDYLAI TL   EI +  L       N   G     ++  +      L R        + 
Sbjct: 126 GDYLAIVTLGFGEIIRVFLNNLDAPVNITNGPKGISQIDSIKFFGLDLGRTLDLGFISLP 185

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                YY+ L M  +S  I   L R+ I  AW  IR+++ A  ++       KL AF + 
Sbjct: 186 SVTLYYYLFLSMVIVSVIICYRLERSRIGRAWMAIREDEIAAKAMGINTRNMKLLAFGMG 245

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           ++F G+AG+ F A +  ISP+ F   E+I+V+++V+LGG+  +  +     +L  + E+ 
Sbjct: 246 ASFGGVAGSMFGAFQGFISPESFSLQESIMVVAMVVLGGIGHIPGVIVGALLLAALPEVL 305

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             +       +        +    L+ +A+  ++L R   L  
Sbjct: 306 RYVAGP-LQEMSGGRLDSAILRQLLIALAMIAIMLARPRGLWP 347


>gi|158520852|ref|YP_001528722.1| inner-membrane translocator [Desulfococcus oleovorans Hxd3]
 gi|158509678|gb|ABW66645.1| inner-membrane translocator [Desulfococcus oleovorans Hxd3]
          Length = 335

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 68/315 (21%), Positives = 127/315 (40%), Gaps = 17/315 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
                      Y   + +   +  +   GLS+++G  G +SL       IGAY    L  
Sbjct: 16  IAATPLAVRNDYYLGLLVFAGLNCLACIGLSLLMGYAGQISLGHAAFIGIGAYVSGYLTV 75

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
           R  + IW  +           +++G+P+LK RG YLA+ATL   EI   + +    IT G
Sbjct: 76  RMDVGIWPAMVAGVGACMLMALVIGVPALKLRGHYLAMATLGFGEIVYIVAVAAIGITGG 135

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             GI    +L+     ++S  RF              +Y    M FL     L L  + +
Sbjct: 136 PEGINSIPKLHLFNYVLKSDTRF--------------FYFTWAMVFLGLFFALNLIHSRV 181

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                 +  ++ A  SL       K+  F +S+ + G+AG  +A   + I P  F    +
Sbjct: 182 GRGLMAVHGSEDAAGSLGVNTARYKIQVFVLSAVYAGLAGCLYAHYVNYIDPGPFGVMHS 241

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           ++++++V +GG+  +         L  + ++   ++ Y+  + +++    +   T +   
Sbjct: 242 VLLVTMVAVGGIHHIWGAVGGALFLSLLPDMLSLLSEYFEGTGIQYR---SDYDTLVYGA 298

Query: 327 ALFLVILMRSHSLLR 341
            L LV+L     +  
Sbjct: 299 ILLLVMLFLPEGIAG 313


>gi|86749204|ref|YP_485700.1| inner-membrane translocator ABC transporter [Rhodopseudomonas
           palustris HaA2]
 gi|86572232|gb|ABD06789.1| inner-membrane translocator ABC transporter [Rhodopseudomonas
           palustris HaA2]
          Length = 832

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 78/286 (27%), Positives = 138/286 (48%), Gaps = 16/286 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A V  L     L A +++ Y+  +   + +  +   GL+++VG  G +S+  V  YAIGA
Sbjct: 14  ATVLILTAIAALYAARAEGYLPFVLAMVALTCIVGVGLNVLVGLTGQISIGHVGFYAIGA 73

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL  +     WL +P++ +I+GA G+++ LP+L+  G YLA+ T+  + I Q++ I
Sbjct: 74  YTVAILTLQGLS-FWLALPLAGVIAGAIGLLLSLPALRVSGPYLAMITIAFAFIVQHLTI 132

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +W+ +T G  G+         GT                     +  + +G+   S  + 
Sbjct: 133 EWRGLTGGSNGLMGLPPPTLAGTMFTERE---------------IALLAIGLAGASTYLF 177

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L  +A   A   +RD + A  S+    +  K +AF +S+A  G+AG  FAA    ++P
Sbjct: 178 YRLAGSAWGKAMVAVRDAEIAARSIGLNPVSVKAAAFVLSAALAGIAGGIFAALIAFVAP 237

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           D F FS++I+ +   I+GG   +       AI + + E+   +  Y
Sbjct: 238 DSFPFSQSILFLFACIVGGAGWVLGPVVGAAITVVLPEMLSQLAEY 283


>gi|218887695|ref|YP_002437016.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218758649|gb|ACL09548.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 415

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 94/326 (28%), Positives = 156/326 (47%), Gaps = 26/326 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             +  +  LL    +       Y  ++ I  L+YVM   GL+IVVG  G L L  V  YA
Sbjct: 89  AAVPALVVLLSAFLVLPWVVSTYQTNIMISALLYVMLGLGLNIVVGLSGQLVLGYVAFYA 148

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAYSY IL S +GL  W ++P+   ++   G+++G P L+ RGDYLAI TL   EI + 
Sbjct: 149 VGAYSYAILNSNFGLGFWSVLPIGGAMAALFGILLGFPVLRLRGDYLAIVTLGFGEIIRL 208

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L  W   + G +GI   +R                   S      ++YY++L    ++ 
Sbjct: 209 VLENWSSFSQGPSGIANIERPG-----------LLGMQLSVSDATTYIYYLILAAVIVTI 257

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L+ + I  AW+ +R+++ A  ++   I   KL+AFA+ + + G AG  FAA    
Sbjct: 258 LAVTRLKNSRIGRAWQALREDEIACQAMGIDITTTKLTAFALGACWAGFAGVIFAAKTTF 317

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           I+P  F F E+ +V+++V+LGGM S+  ++    +LI + E     + Y           
Sbjct: 318 INPASFTFLESAMVLAMVVLGGMGSVIGVSVGALVLILLPEYLRAFSEY----------- 366

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  +    + L+++ R   L+ 
Sbjct: 367 ----RMLIFGATMVLMMVFRPQGLVS 388


>gi|256830054|ref|YP_003158782.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
 gi|256579230|gb|ACU90366.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
          Length = 349

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 70/320 (21%), Positives = 130/320 (40%), Gaps = 16/320 (5%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 Y+ S+   ILI V+ A  L+++ G  G +SL       +GAY   +L    G+ 
Sbjct: 40  PQFLDSYVMSILNLILIAVIGAVSLNLLTGVCGQMSLGHGAFVGVGAYGAAVLS-NLGVP 98

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            +L +     ++   GMI G+PSL+ +G YLAI+TL    I + + +    +T G  G+ 
Sbjct: 99  FFLALLGGGAVAAMVGMIFGIPSLRLKGIYLAISTLAAQLILEYVFLHAGSLTGGANGLP 158

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           V        +                     ++Y++L +  L   ++  + RT    A+ 
Sbjct: 159 VNAPEIMGYSFDTDSK---------------IFYLILLVTVLCVLVVTNVIRTRPGRAFV 203

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            IRD  ++  ++   +   KL AF +SS   G+AG  +A     I+P+ F    +I  ++
Sbjct: 204 AIRDYHQSAENVGVNLFAFKLQAFGLSSFLAGIAGGLWAHYTMYITPEQFSMGLSISYLA 263

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           ++I+GGM S+         +  + E+   +                     +  + L L 
Sbjct: 264 MIIIGGMGSVLGSIFGAIFITLLPEMLNLLTTSLGGIAPDLSAIIVPMKEGVFGLMLVLF 323

Query: 332 ILMRSHSLLRLRTPSNFLER 351
           ++     L R    +    +
Sbjct: 324 LIFEPEGLARKWRLTKAYWK 343


>gi|94971893|ref|YP_593933.1| ABC transporter-related protein [Deinococcus geothermalis DSM
           11300]
 gi|94553944|gb|ABF43859.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter ATP-binding protein 1,
           HAAT family [Deinococcus geothermalis DSM 11300]
          Length = 608

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/329 (17%), Positives = 118/329 (35%), Gaps = 22/329 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++        L       +  ++ + I I+ + A GL ++ G LGL S        +GA
Sbjct: 19  LLMGLAGAVTLLLPLILPLFQVTLLVNIAIFAIVAIGLVLLTGILGLTSFGQAAFMGLGA 78

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L ++ G S WL +P   +++G    ++GL +L+ +G YL +AT+        I  
Sbjct: 79  YTTAVLTTQAGWSPWLTLPAGLVVTGLIAWVLGLLTLRMQGHYLPLATIAWGMSLYYIFG 138

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +  G  GI     +   G ++ S   F       +         LL          
Sbjct: 139 NTPAL-GGFTGITDIPPVRLFGWSLTSPRTFAYLALLALGLVALGAQFLL---------- 187

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
                + +  A R +R       +        ++  F +++    +AG  +A S+  ++P
Sbjct: 188 ----SSRVGRAMRALRSGPVVAEAFGVNAFRLRVQVFVLAALLAALAGWLYAHSQRFVNP 243

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F     I  + + ++GG   +      +A++  + E    +      +   F      
Sbjct: 244 TPFSLQAGIEYLFMAVVGGSQYVWGAVLGSALITLLREWLQDLLPALIGAQGNF------ 297

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSN 347
               +  + + L +      L  L   + 
Sbjct: 298 -EVIVFGVLIILTLQFARRGLWPLLERAL 325


>gi|297528836|ref|YP_003670111.1| inner-membrane translocator [Geobacillus sp. C56-T3]
 gi|297252088|gb|ADI25534.1| inner-membrane translocator [Geobacillus sp. C56-T3]
          Length = 354

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 66/323 (20%), Positives = 131/323 (40%), Gaps = 20/323 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +    +            Y+ S  I I +Y + + G+++++G  G +SL     Y IGA
Sbjct: 16  LLAGAAVWLGLPWLVFGNNYVLSTLILIGLYALVSTGMTMLMGYAGQISLGQAAFYGIGA 75

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+   L +  G   WL +   A+++ +  +++G+P  + R  YLA+ATL    I      
Sbjct: 76  YASAYLTAHAGWPSWLALAAGAVLAASVALVVGIPVFRLREHYLALATLGFGVIMFTFFK 135

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +WK IT G  G +    +              R     +  ++  YY++     +     
Sbjct: 136 EWKGITGGLNGFFGIPPI--------------RIAGVPLQSDLQFYYLVSLFVLVGLWFA 181

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + R+ +  A R I  ++ A  SL   I+  KL  F +S+ +  +AG+ +A     I+P
Sbjct: 182 HNIVRSRVGRALRAIHGSEVAASSLGVNIMKYKLQIFMLSAVYASIAGSLYAHYVTFINP 241

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           D+F    +I  + +V++GG   +       A+ + + E    +      +          
Sbjct: 242 DLFGIVPSISFLIMVVIGGSAHVWGGLVGAAVYVCLGEWLKAVVPLLLPNAGG------E 295

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
                  + L ++++   + L  
Sbjct: 296 FEIVFFGLLLVVMLIYMPNGLTG 318


>gi|138896619|ref|YP_001127072.1| branched chain amino acid ABC transporter permease [Geobacillus
           thermodenitrificans NG80-2]
 gi|134268132|gb|ABO68327.1| Branched-chain amino acid ABC transporter (permease) [Geobacillus
           thermodenitrificans NG80-2]
          Length = 356

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 66/315 (20%), Positives = 125/315 (39%), Gaps = 20/315 (6%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
             F        Y+ S  I I +Y + + G+++++G  G +SL     Y +GAY+   L +
Sbjct: 26  LGFPWLVAGNNYLLSTLIIIGVYALVSTGMTLLMGYAGQISLGQAAFYGVGAYTSAYLTA 85

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G   WL + V A+++     ++G+P  + R  YLA+ATL    I   +  +W+ IT G
Sbjct: 86  HAGWPPWLAMAVGAVLAALVAFVVGIPVFRLREHYLALATLGFGVIMFTLFKEWEAITGG 145

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             G +    +                    +  +I  YY++             + R+ +
Sbjct: 146 LNGFFGIPPIS--------------VLGMSLQTDIQFYYLVWLFVLAGLWFAHNIVRSRV 191

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A R I  ++ A  SL   I   KL  F +S+ +  +AG+ +A     I+PD+F    +
Sbjct: 192 GRALRAIHGSEVAASSLGVNITKYKLQIFMLSAMYASVAGSLYAHYVTFINPDLFGIVPS 251

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I  + +V++GG   +       A+ + + E    +                        +
Sbjct: 252 IYFLIMVVIGGTAGVWGGLVGAAVYVCLGEWLKAVVPILMPDAGG------EFEIVFFGL 305

Query: 327 ALFLVILMRSHSLLR 341
            L ++++     L  
Sbjct: 306 LLIIMLIYMPSGLTG 320


>gi|329940866|ref|ZP_08290146.1| branched chain amino acid transport permease [Streptomyces
           griseoaurantiacus M045]
 gi|329300160|gb|EGG44058.1| branched chain amino acid transport permease [Streptomyces
           griseoaurantiacus M045]
          Length = 602

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 70/335 (20%), Positives = 136/335 (40%), Gaps = 29/335 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG----- 85
             T++  +  ++G+ IL +   A GL+IVVG  GLL L  V    +G+Y+  ++      
Sbjct: 260 PFTQNDDHNANLGVNILTFGTVALGLNIVVGLTGLLDLGYVAFLGVGSYTAALVSGSEYS 319

Query: 86  --SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
             +      W        ++   G+++G P+L+ RGDYLAI TL   EIF+  +      
Sbjct: 320 RFTGTEFPFWAAALTGMAVTLVFGVLIGAPTLRLRGDYLAIVTLGFGEIFRIAVNNMDGS 379

Query: 144 TN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
           +      G     R+  L     +L          +      ++++L +  +   +    
Sbjct: 380 SGPNITNGPNGISRIPDLEIFGFNLGDSHDVAGHTLGRFANYFFLMLIVTAIVVLVFTRA 439

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             + I  +W  +R+++ A  ++       KL AFA+ ++  G+AG   A     ++P  +
Sbjct: 440 ADSRIGRSWIAVREDETAATAMGINGFRVKLVAFALGASLAGLAGTVGAHVSYSVNPAPY 499

Query: 262 KFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +F+      +  +++ V+LGGM ++S      ++L  + E    +  Y            
Sbjct: 500 QFAGAAPPNSAFLLAAVVLGGMGTVSGPLLGASLLYLIPEKLGFLQNY------------ 547

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                    IAL L++  R   ++  R        
Sbjct: 548 ---ELFAFGIALVLLMRFRPEGVIANRRRQLEFHE 579


>gi|158421822|ref|YP_001523114.1| branched chain amino acid ABC transporter [Azorhizobium caulinodans
           ORS 571]
 gi|158328711|dbj|BAF86196.1| ABC branched chain amino acid family transporter [Azorhizobium
           caulinodans ORS 571]
          Length = 392

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 70/327 (21%), Positives = 137/327 (41%), Gaps = 19/327 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  ++   ++  F  A +   Y   + +  ++Y + A  L+  +GS  + +     +Y I
Sbjct: 79  LAMLLGIAIVLAFPFALEGNTYALHLCVISMLYAVLALALNFQLGSANIPNFATGASYGI 138

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +L   +G+S WL +P +A+++   G ++G+PS++ R  YLA+ T+    +   +
Sbjct: 139 GAYASALLALNFGVSFWLALPAAAIVATVFGFLLGIPSMRTRDSYLALVTIAFGVVVNQL 198

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           L      T G  G+         G +  S +            +   YY+   +  +S  
Sbjct: 199 LNNL-DFTGGPNGLVGIPVPELFGHSFASPLVILGAELPP---QANFYYLSALLVLVSIL 254

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               L  + +  AW  +R ++ A       + + K+ AFAV +   G AG  +A     I
Sbjct: 255 FAERLHDSRVGLAWNALRADELAARCQGINVTWYKVLAFAVDAFLAGFAGTIYAFYVGFI 314

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SPD F F  ++ ++++VI GGM ++  +     +L  + E     + Y            
Sbjct: 315 SPDNFTFLVSVTIMTMVIAGGMDNILGVIVGAFLLTLLPEKLRAFSDY------------ 362

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLR 343
                    + +   +++R   L   R
Sbjct: 363 ---RILFFGVTVIAFLMIRPQGLFPQR 386


>gi|283853484|ref|ZP_06370726.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
 gi|283571109|gb|EFC19127.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
          Length = 323

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 73/311 (23%), Positives = 120/311 (38%), Gaps = 29/311 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +Y  S+ I   +  + A GL++++G  G +SL     Y IGAY   I  +R GL
Sbjct: 24  PYALPNEYYLSICILGCLSAVIAVGLNLLMGYAGQISLGHAAFYGIGAYVTAIATTRLGL 83

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            I + + +   ++     I+  P+LK +G YLA+ATL    I   +  +    T G +G 
Sbjct: 84  PIPVGMGLGVGLAALVAWIVAAPTLKLKGHYLAMATLGFGIIVSIVFNEAVDWTGGPSGY 143

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               RL   G +  S                  Y ++  +  L     L L ++    A 
Sbjct: 144 VGIPRLALFGYSFDSDH--------------SYYNLMAVVLALVVLGALNLMKSRTGRAL 189

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +  ++KA  SL   I   K   F +S+A  G+AG  +A     I+P  F F+ ++ ++
Sbjct: 190 RALHVSEKAAASLGVDISAHKRFVFVLSAALAGLAGVLYAHYLSFIAPASFGFTFSVQLV 249

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            +V+LGGM S+         L  + E                          +    L  
Sbjct: 250 VMVVLGGMASVWGSVAGAFFLTILPEALREFED---------------IDILVYGAILVA 294

Query: 331 VILMRSHSLLR 341
            I+     L  
Sbjct: 295 TIMFLPDGLAG 305


>gi|218777929|ref|YP_002429247.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218759313|gb|ACL01779.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 357

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 79/339 (23%), Positives = 145/339 (42%), Gaps = 20/339 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +  K          L++          +Y+ S    I IY +   GL ++ G  G +S+ 
Sbjct: 14  RLFKYRSTFFWYLALVVGCLFLPKILDEYMLSQLTFICIYAVAGVGLMLLTGFTGQISMG 73

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                AIG+Y+  +L ++      L +P S + +   G+++G P L   G YLAIAT+  
Sbjct: 74  HAAFLAIGSYTSAVLTAKGVP-FLLALPASGVTAALVGIVIGRPILHLTGLYLAIATMGA 132

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           + I + IL++W+ +TNG  G+ V                           EI  +Y+ L 
Sbjct: 133 AFIIEEILVRWESVTNGNMGMMVDAP---------------TIFGFGFDTEIRFFYLSLA 177

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  +   +   + R+    A+  IRD++ A  ++   +   K  +FA+S+ F G+AG+ +
Sbjct: 178 VLIIVLLLAKNILRSPTGRAFIAIRDSEIAAEAMGINLASFKTQSFAISAFFTGIAGSLY 237

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A     I+P+ +   ++I +++IVI+GG+ SL      +   I + +L      Y    L
Sbjct: 238 AHKIFFINPESYTIMQSIELLAIVIIGGLGSLHGAVYGSIFFIFLPQLIIISKDY----L 293

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             F          L  + + LV+L     +      + F
Sbjct: 294 PTFVQDQTGLQPALFGLLIILVMLFEPMGIYGRWLKTKF 332


>gi|160901980|ref|YP_001567561.1| inner-membrane translocator [Petrotoga mobilis SJ95]
 gi|160359624|gb|ABX31238.1| inner-membrane translocator [Petrotoga mobilis SJ95]
          Length = 571

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 72/321 (22%), Positives = 139/321 (43%), Gaps = 36/321 (11%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+   ++  L      S+ ++  +   I+I+ + A GL+++ G  G +S+      AIGA
Sbjct: 4   ALYTLIIGSLLGLLFISKSFLLLVFSNIIIFAIAALGLNVIFGYTGQISIGHAAFMAIGA 63

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+         + I++ +    + S   GM++ LP+++ +G YLAIAT+      Q I+ 
Sbjct: 64  YTSAFFTMSLNMPIFVNLIFVILFSALFGMLIALPAMRLKGFYLAIATMAFGIAVQEIIA 123

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
             + +  G+ G+                        +F   + + Y + L    L   I 
Sbjct: 124 SME-VFGGRTGMRNIP--------------------AFFDSDFYTYLLNLFFYSLLVYIT 162

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + ++     +  +RD++ A  +    I  AKL AF +SS + G+AG  +A +   ISP
Sbjct: 163 SLIVKSPAGKRFNMVRDSELAARAFGVKIAKAKLQAFIISSIYSGIAGFLYAHTLGYISP 222

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F  + ++ ++++VI+GG+ SL+     + I+ G+  L    NF               
Sbjct: 223 ADFGLNVSLNLLAMVIVGGVASLNGGLIGSVIITGMPFLFSRSNFPM------------- 269

Query: 319 RHTTLMVIALFLVILMRSHSL 339
             T ++   L + +L     L
Sbjct: 270 --TIIVGSLLIIFVLFFPRGL 288


>gi|148256991|ref|YP_001241576.1| putative high-affinity branched-chain amino acid transport system
           permease [Bradyrhizobium sp. BTAi1]
 gi|146409164|gb|ABQ37670.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 357

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 70/343 (20%), Positives = 148/343 (43%), Gaps = 27/343 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           +IF  + ++   I  ++ + +  L+F         +Y  S+ IQI I+ + A GL+I+VG
Sbjct: 21  TIFPTKTSRNFAIAGVILLCFAPLVF--------SEYWLSVSIQIGIFAIAALGLNILVG 72

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G +S+     + +GA++   + + Y + ++  IP++ +I+   G++ GLP+ + +G Y
Sbjct: 73  FTGQISIGQAGFFLLGAFTSAYINNTYAIPVFFAIPLAGVITALVGLVFGLPAARLKGLY 132

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           L IATL    I  +   + +  + G           F  T                    
Sbjct: 133 LVIATLAAQYILLDFFSRAEWFSGGSVPASANPFSIFGYTLRGDRQY------------- 179

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +YV+L    +   ++  L RT    A   IRD+  +   +   +   +  +F +++ F
Sbjct: 180 --FYVVLAYVLVCYLLVTNLMRTRDGRALIAIRDHYLSAEIMGINLTKYRTLSFGLAAFF 237

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AGA +A  +  IS + F    +I+ ++++I+GG  S+      TA ++ + E    +
Sbjct: 238 AGIAGALYAHYQLVISQEGFGIERSILFLAMIIIGGTGSIMGTLMGTAFVVLLPESMEWL 297

Query: 302 N----FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +        +  L  + +        + + +   ++     L 
Sbjct: 298 SHNLKGSSIDKALALNNNITFLREIAIGLIIIAFLMFEPDGLA 340


>gi|148378458|ref|YP_001252999.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [Clostridium botulinum A str. ATCC
           3502]
 gi|153931583|ref|YP_001382847.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [Clostridium botulinum A str. ATCC
           19397]
 gi|153936686|ref|YP_001386414.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [Clostridium botulinum A str. Hall]
 gi|148287942|emb|CAL82008.1| branched-chain amino acid transport system,permease protein
           [Clostridium botulinum A str. ATCC 3502]
 gi|152927627|gb|ABS33127.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152932600|gb|ABS38099.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [Clostridium botulinum A str. Hall]
          Length = 314

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 89/331 (26%), Positives = 147/331 (44%), Gaps = 29/331 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +  +  L + L      + +YI  + I IL+Y + +  L+ V G+ G +S+     Y IG
Sbjct: 9   IMFLIILAILLVAPFMITNQYILHIIITILLYSILSMSLNFVSGNAGQISVGHAAFYGIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL     L     + +  +++G CG+ +G+PSL+ +G+YL I TL   EI + IL
Sbjct: 69  AYTTSILMISAHLPFITAMLLGGLLAGICGIFLGIPSLRVKGNYLCIITLGFGEIVKLIL 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + W  +T G  GI       FL                     +  YY++L +  +S  I
Sbjct: 129 LNWDKVTGGPMGISSIPSPEFLSIFKDKN--------------LGFYYLILLLFVVSFVI 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  +        +R+N+ A  SL   I   KL +F +SS   G+AG F+A     IS
Sbjct: 175 LYKLTYSNYGLLMLAVRENEIAATSLGINITSIKLFSFIISSFIAGIAGGFYATYVSFIS 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F F E+I ++++VI+GG  ++        +L  + EL    N Y             
Sbjct: 235 PESFMFKESITILAMVIIGGKGNIVGSIIGAIVLAIIPELLREFNDY------------- 281

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                   + L L+I+ R   +  L+    F
Sbjct: 282 --RMLFYGLGLVLMIVFRPDGIYGLKYRKKF 310


>gi|313109908|ref|ZP_07795837.1| putative permease of ABC branched-chain amino acid transporter
           [Pseudomonas aeruginosa 39016]
 gi|310882339|gb|EFQ40933.1| putative permease of ABC branched-chain amino acid transporter
           [Pseudomonas aeruginosa 39016]
          Length = 425

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 96/329 (29%), Positives = 156/329 (47%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V  +L+   +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 98  IVPLILVAAVIFPFFASKYLLAVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 157

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 158 GLALGYQYLGLGFWTVLPLAALTAAVAGAILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 217

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+      +      R        +  F     +  +  +F+Y VL  +  
Sbjct: 218 WLSFTGGPNGMPAPAPTFLGLEFGRRAKDGGVPIHEFLGIAYNPNMKFLFIYVVLFLVVL 277

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   I   L R  +  AW  +R+++ A  ++    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 278 LVLYIKHRLTRMPVGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGLAGVFFASY 337

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL               
Sbjct: 338 QGFVNPSSFNFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFAD--------- 388

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L+ I + ++++ R   L+R
Sbjct: 389 ------IRVLLLGILMVVMMIWRPRGLIR 411


>gi|86750682|ref|YP_487178.1| branched-chain amino acid transport system ATP-binding protein
           [Rhodopseudomonas palustris HaA2]
 gi|86573710|gb|ABD08267.1| branched-chain amino acid transport system ATP-binding protein
           [Rhodopseudomonas palustris HaA2]
          Length = 589

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 69/334 (20%), Positives = 128/334 (38%), Gaps = 27/334 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + ++  IL   AV+  L L   +       +   +   I +  + A GL ++ G  GL S
Sbjct: 1   MPRWLPILLFAAVMTALPLIPGMPP-----FWIVLLDNIGLAALVAMGLVLLTGVGGLTS 55

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                    GAY+   L + YG+S WL +P+S +++G   +++GL +++  G YL + T+
Sbjct: 56  FGQAAFCGFGAYTTAYLATVYGVSPWLTLPLSLLVAGTAAVLLGLMTVRLSGHYLPLGTI 115

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                   +  K   +     GI     L      +                   +Y+V+
Sbjct: 116 AWGISLYYLFSKLDFL-GRNDGISQVPPLSIGSLQMFDPET--------------IYFVI 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
            GM  +SA + + L  +    A R +R    A  +       AKL  F  ++   G++G 
Sbjct: 161 WGMVLISAVLTMNLLDSRTGRAIRALRRGHIAAEAFGVQTARAKLLVFIYAAVLAGLSGW 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A  +  ++P  F     I  + I ++GG   +       AI+I + E+  G     F 
Sbjct: 221 LYAHFQRNVNPTPFGPQAGIEYLFIAVVGGAGYVWGGVLGAAIVIILKEVLQGYLPMLFG 280

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                          +  I L L++ +    +  
Sbjct: 281 GQ-------GQLEIIVFGILLVLLLQLAPGGVWP 307


>gi|148254676|ref|YP_001239261.1| branched chain amino acid ABC transporter permease/ATP-binding
           protein [Bradyrhizobium sp. BTAi1]
 gi|146406849|gb|ABQ35355.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter ATP-binding protein 1,
           HAAT family [Bradyrhizobium sp. BTAi1]
          Length = 589

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/327 (15%), Positives = 115/327 (35%), Gaps = 21/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +       +L L         +  ++   I +Y + A GL+++ G  G++S       
Sbjct: 4   LHVQLAAMVAMLCLAAAPFLLPPFTITLMNYIGVYSLVAIGLALLTGVGGIVSFGQAAFV 63

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I AY+   + +  G S W+ + ++  ++ +   ++GL +L+ +G +L+++T+       
Sbjct: 64  GIAAYATAWVSALNGQSPWVGLLLALTLTCSIATLLGLATLRLQGHFLSLSTVAWGLAIG 123

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +    + +     GI     + F                  ++    +Y+++ G+    
Sbjct: 124 FLFGNVEGL-GRFNGIASIPPISFGSY--------------ALVSSAQVYFLIWGIVAAV 168

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I   L  + +  A R +R       SL  +    KL  F +++    ++G  +A    
Sbjct: 169 LWIGYNLLDSRLGRAMRALRGGNTLVESLGISAFRIKLLIFVIAAFLAALSGWLYAHMSR 228

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ISP  F     I  + + ++GG  SL       AI+  +                    
Sbjct: 229 FISPGPFDAGMGIEYLMMSMVGGAGSLLGGVVGAAIVTLLKNSVQDYLPLIAKG------ 282

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
           +              L +      ++ 
Sbjct: 283 ASGQLEIVAFSALFILFLQWARQGIVP 309


>gi|254425744|ref|ZP_05039461.1| ABC transporter, ATP-binding protein [Synechococcus sp. PCC 7335]
 gi|196188167|gb|EDX83132.1| ABC transporter, ATP-binding protein [Synechococcus sp. PCC 7335]
          Length = 832

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 67/288 (23%), Positives = 124/288 (43%), Gaps = 15/288 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L+  +    L +         Y   +   I +  + + GL+++ G  G +S+     +AI
Sbjct: 8   LMVGLTIFALAIAAALGAPNTYYLFVLGMIAVTTIVSVGLNVLAGLSGQISIGHAGFFAI 67

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +L  R    +   + + A+ +   G+ +  P+L+  G YLA+ T+    I + +
Sbjct: 68  GAYAGSLLMLRADWHLGAALLLGAITAAGTGVALSGPALQVSGPYLAMVTIAFGIIIERV 127

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           LI+W  +T G  G+    +                              +++ + FLS  
Sbjct: 128 LIEWVSLTGGFGGLSGIPKPT---------------LLGLQPALRESVLLVIVLAFLSVV 172

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               L+R     A++ +RD+  A  ++    ++ K+  FAVS+A  G+AG FFA     +
Sbjct: 173 SFALLKRHPWGKAFQAVRDDAIAAAAVGLNPLYVKVMGFAVSAALTGLAGVFFAIIVGFV 232

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           SPD F F  +I+ +  +ILGG+ +         IL+ + E       Y
Sbjct: 233 SPDSFTFHRSILFLLAIILGGLGTAEGAFIGALILVILPEFLHDFVDY 280


>gi|331002580|ref|ZP_08326096.1| hypothetical protein HMPREF0491_00958 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330408308|gb|EGG87784.1| hypothetical protein HMPREF0491_00958 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 344

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 92/337 (27%), Positives = 153/337 (45%), Gaps = 28/337 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  K      +  ++  L+LF+ L    S +Y  ++ I+I +YV  A GL+I+ G  GL+
Sbjct: 13  KFQKITYTYRIYLLLITLILFVILPFVFSNQYFLTIIIKIGVYVCLAMGLNILTGYTGLV 72

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           SL      AIGAY+  IL  R+G + +    V  +++G  GMI+GLPSL+  G YL+I T
Sbjct: 73  SLGHAGFVAIGAYASSILVVRHGFNFFAASLVGMIVAGVIGMILGLPSLRVSGTYLSIIT 132

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI +   + +  +TNG  GI    +                F  +  +    +YY+
Sbjct: 133 LGFGEIIKMTAMNFTALTNGTLGIKNIPKPGI-------------FGFTLNVTNYGLYYM 179

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L    L +     L ++    A + I+ ++ A   +   I + K+ AF VS+      G
Sbjct: 180 MLITVILISLFCYLLVKSKTGRALQAIKTDELAATMMGININYYKIIAFVVSAMICAFGG 239

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           + ++     I P+ F F  + +++SIVILGGM +L  +     ILI   E+   +  Y  
Sbjct: 240 SLYSVLIGYIDPNTFNFDVSTLILSIVILGGMGTLRGMFVGAIILIAFPEVSRFLMEY-- 297

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                           L  I L L++  R   +L  +
Sbjct: 298 -------------RFVLYGIILVLMMRFRPQGILGYK 321


>gi|15600104|ref|NP_253598.1| permease of ABC branched-chain amino acid transporter [Pseudomonas
           aeruginosa PAO1]
 gi|107104010|ref|ZP_01367928.1| hypothetical protein PaerPA_01005083 [Pseudomonas aeruginosa PACS2]
 gi|116053060|ref|YP_793379.1| putative permease of ABC branched-chain amino acid transporter
           [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254244196|ref|ZP_04937518.1| hypothetical protein PA2G_05041 [Pseudomonas aeruginosa 2192]
 gi|296391748|ref|ZP_06881223.1| putative permease of ABC branched-chain amino acid transporter
           [Pseudomonas aeruginosa PAb1]
 gi|9951188|gb|AAG08296.1|AE004904_4 probable permease of ABC branched-chain amino acid transporter
           [Pseudomonas aeruginosa PAO1]
 gi|115588281|gb|ABJ14296.1| putative permease of ABC branched-chain amino acid transporter
           [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126197574|gb|EAZ61637.1| hypothetical protein PA2G_05041 [Pseudomonas aeruginosa 2192]
          Length = 425

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 96/329 (29%), Positives = 156/329 (47%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V  +L+   +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 98  IVPLILVAAVIFPFFASKYLLAVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 157

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 158 GLALGYQYLGLGFWTVLPLAALTAAVAGAILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 217

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+      +      R        +  F     +  +  +F+Y VL  +  
Sbjct: 218 WLSFTGGPNGMPAPAPTFLGLEFGRRAKDGGVPIHEFLGIAYNPNMKFLFIYVVLFLVVL 277

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   I   L R  +  AW  +R+++ A  ++    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 278 LVLYIKHRLTRMPVGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGLAGVFFASY 337

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL               
Sbjct: 338 QGFVNPSSFNFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFAD--------- 388

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L+ I + ++++ R   L+R
Sbjct: 389 ------IRVLLLGILMVVMMIWRPRGLIR 411


>gi|254238371|ref|ZP_04931694.1| hypothetical protein PACG_04509 [Pseudomonas aeruginosa C3719]
 gi|126170302|gb|EAZ55813.1| hypothetical protein PACG_04509 [Pseudomonas aeruginosa C3719]
          Length = 425

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 96/329 (29%), Positives = 156/329 (47%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V  +L+   +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 98  IVPLILVAAVIFPFFASKYLLAVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 157

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 158 GLALGYQYLGLGFWTVLPLAALTAAVAGAILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 217

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+      +      R        +  F     +  +  +F+Y VL  +  
Sbjct: 218 WLSFTGGPNGMPAPAPTFLGLEFGRRAKDGGVPIHEFLGIAYNPNMKFLFIYVVLFLVVL 277

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   I   L R  +  AW  +R+++ A  ++    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 278 LVLYIKYRLTRMPVGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGLAGVFFASY 337

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL               
Sbjct: 338 QGFVNPSSFNFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFAD--------- 388

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L+ I + ++++ R   L+R
Sbjct: 389 ------IRVLLLGILMVVMMIWRPRGLIR 411


>gi|260907107|ref|ZP_05915429.1| inner-membrane translocator [Brevibacterium linens BL2]
          Length = 353

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 76/319 (23%), Positives = 140/319 (43%), Gaps = 12/319 (3%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  + +   +       Y  S+    LI  + A GL+++VG  G +SL      A+GA++
Sbjct: 29  IGAVAVIAIIVPFVFDNYWLSLANTALIASIGAIGLNVLVGYTGQISLGQGGFLAVGAFT 88

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             IL  R G+   L I ++ + +   G++ GLP+L+ +G YLAIATL    +   I+ +W
Sbjct: 89  SAILTDRMGVPAPLSILMAVVTTAVIGVLFGLPALRLKGLYLAIATLASQVVILFIVRRW 148

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G+                 S +  F F      +E   Y +L+ +  L A     
Sbjct: 149 NFLTEGQG------------FVDVSRLEVFGFKIERSTFEQQWYIILIIVTILVAITATN 196

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L RT I  A+  +RD   A  ++   +   KL+AFAVS+A++G+AGA  A   + IS + 
Sbjct: 197 LFRTNIGRAFMAVRDQDIAASAMGVNLTRTKLTAFAVSNAYVGLAGALLAHYSEIISWEK 256

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F    +I+ ++++I+GG+ S++        +  +              + +         
Sbjct: 257 FTMDVSILYLAMIIVGGLGSIAGSIYGAMFMTFLPIAVRMFGEVIGGVVPQVQKQLPAVE 316

Query: 321 TTLMVIALFLVILMRSHSL 339
                + + + ++     L
Sbjct: 317 HAAFGLVIIIFLIFEPRGL 335


>gi|134095638|ref|YP_001100713.1| high-affinity branched-chain amino acid ABC transporter membrane
           protein [Herminiimonas arsenicoxydans]
 gi|133739541|emb|CAL62592.1| Putative high-affinity branched-chain amino acid transport system
           permease protein BraE/LivM [Herminiimonas
           arsenicoxydans]
          Length = 404

 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 97/379 (25%), Positives = 172/379 (45%), Gaps = 40/379 (10%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           + F ++ N       LLA++   L+F F+       ++  +    L+Y+M A GL+IVVG
Sbjct: 3   NYFDVKNNPRKAWSGLLAILALALIFPFIAQHFGNSWV-RIMDMALLYIMLALGLNIVVG 61

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRY--------------------------------G 89
             GLL L  +  YAIGAY   +L S                                   
Sbjct: 62  FAGLLDLGYIAFYAIGAYLTALLASPQFAVVLESFVNQYPPIGAALMWVFGSEIAQNGIH 121

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           LS+W+++P++ +++G  G ++G P+LK RGDYLAI TL   EI +  +       N   G
Sbjct: 122 LSLWVIVPLAVLVAGFFGALLGAPTLKLRGDYLAIVTLGFGEIIRIFMNNLNGPVNITNG 181

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF------MYYVLLGMCFLSASIILWLRR 203
               + +  +     SL       S+ ++           Y++ L +C     I + L+ 
Sbjct: 182 PQGINMIDPIRIFGVSLNGDEGSASTVMLGNYAMPSVNAYYFLFLVLCIAIIFISVRLQN 241

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           + +  A+  IR+++ A  ++       KL AFA+ ++F G+AGA FA+ +  +SP+ F  
Sbjct: 242 SRLGRAFVAIREDEIAAKAMGINTRNVKLLAFAMGASFGGVAGAMFASFQGFVSPESFSL 301

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-FDCSFNMRHTT 322
           +E+I V+++V+LGGM  +  +     +L  + E+   +      +L         +    
Sbjct: 302 TESIAVLAMVVLGGMGHIPGVVLGGILLAALPEVLRHVVEPLQRTLFGEVLIDAEILRQL 361

Query: 323 LMVIALFLVILMRSHSLLR 341
           L  +A+ L++L+R   L  
Sbjct: 362 LYGLAMVLIMLIRPAGLWP 380


>gi|168177801|ref|ZP_02612465.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [Clostridium botulinum NCTC 2916]
 gi|226947691|ref|YP_002802782.1| putative high-affinity branched-chain amino acid ABC transporter
           permease [Clostridium botulinum A2 str. Kyoto]
 gi|182671229|gb|EDT83203.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [Clostridium botulinum NCTC 2916]
 gi|226842666|gb|ACO85332.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [Clostridium botulinum A2 str. Kyoto]
          Length = 314

 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 88/331 (26%), Positives = 146/331 (44%), Gaps = 29/331 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +  +  L + L      + +YI  + I IL+Y + +  L+ V G+ G +S+     Y IG
Sbjct: 9   IMFLIILAILLVAPFMITNQYILHIIITILLYSILSMSLNFVSGNAGQISVGHAAFYGIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL     L     + +  +++G CG+ +G+PSL+ +G+YL I TL   EI + IL
Sbjct: 69  AYTTSILMINAHLPFITAMLLGGLLAGICGIFLGIPSLRVKGNYLCIITLGFGEIVKLIL 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + W  +T G  GI       FL                     +  YY++L +  +   I
Sbjct: 129 LNWDKVTGGPMGISSIPSPEFLSIFKDKN--------------LGFYYLILLLFVVFFVI 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  +        +R+N+ A  SL   I   KL +F +SS   G+AG F+A     IS
Sbjct: 175 LYKLTYSNYGLLMLAVRENEIAATSLGINITSIKLFSFIISSFIAGIAGGFYATYVSFIS 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F F E+I ++++VI+GG  ++        +L  + EL    N Y             
Sbjct: 235 PESFMFKESITILAMVIIGGKGNIVGSIIGAIVLAIIPELLREFNDY------------- 281

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                   + L L+I+ R   +  L+    F
Sbjct: 282 --RMLFYGLGLVLMIVFRPDGIYGLKYRKKF 310


>gi|332526027|ref|ZP_08402165.1| putative transport system permease [Rubrivivax benzoatilyticus JA2]
 gi|332109870|gb|EGJ10498.1| putative transport system permease [Rubrivivax benzoatilyticus JA2]
          Length = 363

 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 79/301 (26%), Positives = 139/301 (46%), Gaps = 17/301 (5%)

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSA 100
           +IVVG  GLL L  V  YA+GAY Y +L S +                   IWL+IP++A
Sbjct: 47  NIVVGYAGLLDLGYVAFYAVGAYMYALLASPHLMENFEWIANAFPNGLHTPIWLVIPLAA 106

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
            ++   G+++G P LK RGDYLAI TL   EI +  +   +   N   G    DR+  + 
Sbjct: 107 GLAALAGVLLGTPVLKLRGDYLAIVTLGFGEIIRVFMNNLEYPVNITNGPRGLDRIDPMN 166

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                  +        +      YY+ L +   S  I   L R+ I  AW  IR+++ A 
Sbjct: 167 IFGFEFGKAVTIGDFTMPAVTLYYYLFLALVIFSVLISYRLERSRIGRAWMAIREDEIAA 226

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++       KL AF + + F G++G+ FA+ +  +SP+ F   E+++++++++LGG+  
Sbjct: 227 KAMGINTRNMKLLAFGMGATFGGVSGSMFASFQGFVSPESFSLQESVMIVAMIVLGGLGH 286

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +  +     +L  + E+   +       +        +    L+ +A+  ++L+R   L 
Sbjct: 287 IPGVILGAVLLAALPEVLRYVAGP-LQEMTGGRLDAAILRQLLIALAMISIMLLRPRGLW 345

Query: 341 R 341
            
Sbjct: 346 P 346


>gi|257126944|ref|YP_003165058.1| inner-membrane translocator [Leptotrichia buccalis C-1013-b]
 gi|257050883|gb|ACV40067.1| inner-membrane translocator [Leptotrichia buccalis C-1013-b]
          Length = 369

 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 70/344 (20%), Positives = 133/344 (38%), Gaps = 48/344 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   +  +  +   ++L        +  Y   + I ILI+++F+  L+I VG +G L+L 
Sbjct: 45  KNYVVTFISIIALYIVLSFTFDPNDAFSYTKGIYINILIFILFSVSLNITVGLMGQLNLG 104

Query: 70  CVIAYAIGAYSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
                AIG YS   +            + + L+     +++   G ++G  +L+ RGDYL
Sbjct: 105 QAGFIAIGGYSAAFISKILVNYNLPPIIQLILVSLFGGLVAAIFGFLVGGSTLRLRGDYL 164

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           AI TL   EI + I+     +        +   L F  T    +I       +       
Sbjct: 165 AIITLAFGEIVKYIIQNLDFLGGATGLNNIPTILDFSNTYFIVVISIVIITMAMT----- 219

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
                                +       +IR+++ A  ++   +   KL  FA S+ F 
Sbjct: 220 ---------------------SRKGKEILSIREDEIAAENIGIGLNRVKLYGFAFSAFFA 258

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+ G+ FA +   ++PD F F  +I ++ +V+LGG+ S++    A  IL  + E    + 
Sbjct: 259 GVGGSLFAHNIGILTPDKFGFLFSIEILVMVVLGGLGSITGAIVAATILTLLNERLRDV- 317

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                         +     +  I L  +++ R   +   +  +
Sbjct: 318 --------------SQFRYLIYAIILISLMIFRPKGIFGTKEFT 347


>gi|317401333|gb|EFV81970.1| ABC transporter like protein [Achromobacter xylosoxidans C54]
          Length = 640

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 68/312 (21%), Positives = 141/312 (45%), Gaps = 16/312 (5%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            K L LL  +  +     +    +  Y   +   I+IY +  +GL IVVG  G +SL   
Sbjct: 1   MKPLHLLLSIVAVACLAAVPLGVTNTYYLHLIETIMIYSILLFGLDIVVGYTGQVSLGHA 60

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             + IG+Y   +L     + IW+++P + +I+ A G ++ LP+L+  G YLA+ TL    
Sbjct: 61  GLFGIGSYVAGVLFFHLQMPIWVILPAAILIAAAFGAVLALPALRVTGPYLAMVTLAFGT 120

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I Q ++ +   +T G  GI +                        ++ +   ++++  + 
Sbjct: 121 IIQILINEMTFLTEGPLGIKIPKPS----------------IGGHILTKSEYFWLVAALL 164

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            LS  ++  + ++ +  ++  +RD+  A   +  ++   K+ AF +S+ F G+AGA ++ 
Sbjct: 165 VLSLIVVHRILKSHLGRSFEALRDSPIASDCMGVSVYRHKVFAFVISAGFAGLAGALYSY 224

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           S   ISP+ + F   I+ +  +I+GG  S +      +I++ + ++   +  +   +L  
Sbjct: 225 SEQYISPNTYNFELTILFLLAIIMGGRKSRTGALLGASIIVLLPKMLDDIATFRLIALGV 284

Query: 312 FDCSFNMRHTTL 323
                      +
Sbjct: 285 AILVTVGSAIAI 296


>gi|51891844|ref|YP_074535.1| branched-chain amino acid ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
 gi|51855533|dbj|BAD39691.1| branched-chain amino acid ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
          Length = 355

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 74/329 (22%), Positives = 137/329 (41%), Gaps = 16/329 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             +A  + L+  L+        Y  S+   + IY + A GL+++ G  G +S+       
Sbjct: 27  LAVARGWVLVALLYAIPWFLPNYYVSILNMVAIYTIAALGLNLLTGVTGQISVGHGAFTG 86

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GA++   L  +     W+ +P++ + + A G + GLPS + +G YLAIA+L    I   
Sbjct: 87  MGAFTVGYLMKQGLP-FWVAMPLAGLTAAAVGALFGLPSARLKGLYLAIASLAAQVILTF 145

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
              +    T G   + V    +F  T               +  E   +Y+ L +  L  
Sbjct: 146 FFTRADWFTGGIHSMSVRRPSFFGHT---------------LSGERSYFYLALTVALLLG 190

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L RT I  A+  +RD   A   +   +   K++AFA+S+ + G+AGA +A     
Sbjct: 191 VFAQNLLRTRIGRAFMAVRDRDLAAEVMGIDLFRTKVTAFALSAFYAGIAGAIWAPYVMI 250

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ISP+ F+   +I +++++I+GGM S+       A +  +  +   +              
Sbjct: 251 ISPEQFEIHLSIELLAMIIIGGMGSVMGSVYGAAFMTVMPIVVRELAMLLEPVFPSVGTK 310

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             +        A+ L ++     L +L  
Sbjct: 311 LLLIRDAAFGAAIVLFLIFEPEGLAKLWR 339


>gi|152989725|ref|YP_001350957.1| branched chain amino acid ABC transporter permease [Pseudomonas
           aeruginosa PA7]
 gi|150964883|gb|ABR86908.1| probable permease of ABC branched-chain amino acid transporter
           [Pseudomonas aeruginosa PA7]
          Length = 425

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 96/329 (29%), Positives = 156/329 (47%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V  +L+   +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 98  IVPLILVAAVIFPFFASKYLLAVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 157

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 158 GLALGYQYLGLGFWSVLPLAALGAAVAGAILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 217

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+      +      R        +  F     +  +  +F+Y VL  +  
Sbjct: 218 WLSFTGGPNGMPAPAPTFLGLEFGRRAKDGGVPIHEFLGIAYNPNMKFLFIYVVLFLVVL 277

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   I   L R  +  AW  +R+++ A  ++    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 278 LVLYIKHRLTRMPVGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGLAGVFFASY 337

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL               
Sbjct: 338 QGFVNPSSFNFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFAD--------- 388

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L+ I + ++++ R   L+R
Sbjct: 389 ------IRVLLLGILMVVMMIWRPRGLIR 411


>gi|294341017|emb|CAZ89412.1| putative High-affinity branched-chain amino acid transport system
           permease protein livM (LIV-I protein M) [Thiomonas sp.
           3As]
          Length = 373

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 87/346 (25%), Positives = 155/346 (44%), Gaps = 19/346 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              +      L+ L +    +      +    ++Y+M A GL+IVVG  GLL L  +  Y
Sbjct: 7   WVWIVAGAAALIALPMVLQIAGDAWVRIAAFAMLYIMLALGLNIVVGLAGLLDLGYIAFY 66

Query: 75  AIGAYSYVILGSR----------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           A+GAY Y +L S                 + +SIWL++P++A ++ + G+ +G P LK R
Sbjct: 67  AVGAYLYALLSSNQLTSNFDALGAMFPNGFDVSIWLVVPMAAALAASAGIALGTPVLKLR 126

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           GDYLAI TL   EI +  +       N   G      ++ +      L +     S  + 
Sbjct: 127 GDYLAIVTLGFGEIIRIFMNNLNAPINITNGPQGISGIHGIHLFGWDLNQNINIGSFTIP 186

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                YY+ L +      +   L+ + I  AW  +R+++ A  ++       KL AF++ 
Sbjct: 187 SVAQYYYLFLVLVVFVVILSYRLQDSRIGRAWMAMREDEIAAKAMGINTRNMKLLAFSMG 246

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           + F G+AG  F+A +  +SP+ F   E+IIV+++V++GGM  +  +     +L  + E  
Sbjct: 247 ATFGGVAGVMFSAFQGFVSPESFSLLESIIVLAMVVIGGMGHIPGVILGAVLLSVLPEAL 306

Query: 299 CGMNFYYFNSLLKFD---CSFNMRHTTLMVIALFLVILMRSHSLLR 341
             M F        F        +    +  +A+ +++++R   L  
Sbjct: 307 RYMGFISDWQQHTFGHVYMDSGILRQLIYALAMIIIMILRPKGLWP 352


>gi|218779554|ref|YP_002430872.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218760938|gb|ACL03404.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 330

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 73/322 (22%), Positives = 122/322 (37%), Gaps = 29/322 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           LA      +    G      +       I I+ + A GL++++G  G +SL     Y IG
Sbjct: 17  LAFFVFAGVIFLAGLFLDNYFYQQQLTFIGIFTLLAVGLNMLMGYAGQISLGHAAFYGIG 76

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+   L    G S W  +P +   SG    I+G P+LK  G YL + TL    I   + 
Sbjct: 77  AYTTGALTVHLGWSPWASLPCALAASGIIAYIVGKPTLKLSGYYLGMGTLGFGMIMHVLF 136

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +W  IT G  G+     L                    +       +V+ G   ++  I
Sbjct: 137 REWGSITGGPNGLVGIPSLS--------------LWGIDLSTGRNYLWVVWGCVLITFFI 182

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L  + +  A R I  +++A  ++      AKL  F  S+    +AG  +A     IS
Sbjct: 183 CDRLVNSRVGRALRAIHFSEQAASAVGVDTAKAKLQVFVFSAMVAALAGFLYAHLVMFIS 242

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F F  ++ ++++V++GGM S+      + +L  + E     + Y             
Sbjct: 243 PGSFGFLVSVKLVAMVVIGGMASIWGALLGSTLLTMLPEWLHAFSDY------------- 289

Query: 318 MRHTTLMVIALFLVILMRSHSL 339
                +    L  V++     L
Sbjct: 290 --EMVIYGGILMGVMIFLPQGL 309


>gi|170757305|ref|YP_001780110.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [Clostridium botulinum B1 str. Okra]
 gi|169122517|gb|ACA46353.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [Clostridium botulinum B1 str. Okra]
          Length = 314

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 88/331 (26%), Positives = 146/331 (44%), Gaps = 29/331 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +  +  L + L      + +YI  + I IL+Y + +  L+ V G+ G +S+     Y IG
Sbjct: 9   IMFLIILAILLVAPFMITNQYILHIIITILLYSILSMSLNFVSGNAGQISVGHAAFYGIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL     L     + +  +++G CG+ +G+PSL+ +G+YL I TL   EI + IL
Sbjct: 69  AYTTSILMISADLPFITAMLLGGLLAGICGIFLGIPSLRVKGNYLCIITLGFGEIVKLIL 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + W  +T G  GI       FL                     +  YY++L +  +   I
Sbjct: 129 LNWDKVTGGPMGISSIPSPEFLSIFKDKN--------------LGFYYLILLLFVVFFVI 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  +        +R+N+ A  SL   I   KL +F +SS   G+AG F+A     IS
Sbjct: 175 LYKLTYSNYGLLMLAVRENEIAATSLGINITSIKLFSFIISSFIAGIAGGFYATYVSFIS 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F F E+I ++++VI+GG  ++        +L  + EL    N Y             
Sbjct: 235 PESFMFKESITILAMVIIGGKGNIVGSIIGAIVLAIIPELLREFNDY------------- 281

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                   + L L+I+ R   +  L+    F
Sbjct: 282 --RMLFYGLGLVLMIVFRPDGIYGLKYRKKF 310


>gi|323706038|ref|ZP_08117608.1| inner-membrane translocator [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534652|gb|EGB24433.1| inner-membrane translocator [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 321

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 73/339 (21%), Positives = 140/339 (41%), Gaps = 41/339 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   ++ L  + +  ++ + L       Y +   + + I V+ A  L+++ G  G  SL 
Sbjct: 9   KNRLLIFLGLLAFYGIIQILLSTNILNDYYEINIVLMGINVILAVSLNLINGFTGQFSLG 68

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                +IGAY+  I+  + GL   L + V  + +G  G+++G+PSL+ +GDYLAI TL  
Sbjct: 69  HAGFMSIGAYTSAIITYKLGLPFPLALLVGGIAAGIAGILIGIPSLRLKGDYLAITTLGF 128

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            EI + I +  + +  G +G+    +                               +  
Sbjct: 129 GEIIRVIFLNTEYV-GGASGLSGIPKYTNWT-------------------------WVFW 162

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  ++  +I     ++       IR+++ A  S+     F K  AF + + F G+ GA +
Sbjct: 163 IAVITVVLIRNFINSSYGRCCVAIREDETAAESMGINTTFYKTLAFTIGAFFAGIGGALY 222

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A +   I P+ F F ++  ++++V+LGG+ S++    +   L  V  L            
Sbjct: 223 AHNFYIIQPETFNFMKSFDILTMVVLGGLGSITGSILSAIFLTFVYALLQDY-------- 274

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                        +  + L +V+L R   L+  R  S  
Sbjct: 275 -------AALRMVIYALLLIIVMLFRPEGLMGTREFSLK 306


>gi|152966899|ref|YP_001362683.1| inner-membrane translocator [Kineococcus radiotolerans SRS30216]
 gi|151361416|gb|ABS04419.1| inner-membrane translocator [Kineococcus radiotolerans SRS30216]
          Length = 386

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 79/349 (22%), Positives = 145/349 (41%), Gaps = 30/349 (8%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKY-IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
           +  LLA+ + +L  L L    +      S+   +  Y + A GL+IV+G  GLL L  V 
Sbjct: 33  VWVLLALFFFVLPLLNLPIVSTPDAEFGSVLASVANYALVALGLNIVLGYAGLLDLGYVG 92

Query: 73  AYAIGAYSYVIL-GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
            YAIGAY+  +       ++ ++LI ++  IS A G+++G P+L+ RGDYLAI TL   E
Sbjct: 93  FYAIGAYTVGVGGSLHGEINWFVLIIMAVTISTASGLLLGAPTLRVRGDYLAIVTLGFGE 152

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF-------------FRFPSSFVI 178
           I +   +  + +   +    +          + SL+                 F    ++
Sbjct: 153 IIRLTALNTEWLNQARGITGIPRPPSTELFGLPSLVWDGATAKVDLGEGARSIFLKFGLL 212

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
             +  Y++ L +  L       L+ + +  AW   R++++A           KL AFA+ 
Sbjct: 213 DAVPYYWLALIVIILVLIADKLLQASRVGRAWEATREDEEAAELNGVPTFRFKLLAFAMG 272

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           +   G++GA +A+    I+PD F    +++ ++ V++GG  +         ++  + E  
Sbjct: 273 AFVGGLSGALYASRIGAINPDSFMIQLSMMFLAAVVIGGQGNRWGAIVGGVVVAYLPERF 332

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                +                  +  + L L+   R   LL  R    
Sbjct: 333 REFADF---------------RIVVFGLLLLLLANFRPQGLLPPRRAKR 366


>gi|209518173|ref|ZP_03267001.1| ABC transporter related [Burkholderia sp. H160]
 gi|209501380|gb|EEA01408.1| ABC transporter related [Burkholderia sp. H160]
          Length = 646

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 68/294 (23%), Positives = 134/294 (45%), Gaps = 16/294 (5%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
                   Y   +   I+IY +  +GL IVVG  G +SL     + +GAY+  +L  + G
Sbjct: 19  FPVLSGNPYYIHLVETIMIYAILLFGLDIVVGYTGQVSLGHAGLFGVGAYTAGVLFMKLG 78

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L I++  P++ +++   G I+ LP+L+  G YLA+ TL    I Q ++ +   +TNG  G
Sbjct: 79  LPIFVTAPLAILVTAGFGAILALPALRVSGPYLAMVTLAFGTILQILINEMDFLTNGPMG 138

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           + +                           E+  Y+++  +   S  ++  + R+ +  A
Sbjct: 139 VKIPKPSLGARPM----------------NEVEYYWLVAALLVASLIVVHRVLRSHLGRA 182

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
           +  +RD+  A   +  ++   K+ AF +S+ F G+AG  ++ S   ISP+ + F   I+ 
Sbjct: 183 FEALRDSPIASDCMGVSVYRYKVYAFVISAGFSGLAGCLYSYSEQYISPNTYNFELTILF 242

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  +I+GG  + +     +AI++ + +L   ++ +   + L            L
Sbjct: 243 LLAIIMGGRKTRAGALLGSAIIVLLPKLLDDIDMFRTVASLLAAVVMIGASVAL 296


>gi|288959868|ref|YP_003450208.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288912176|dbj|BAI73664.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 612

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 79/324 (24%), Positives = 143/324 (44%), Gaps = 29/324 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           AV     L L L     Q Y+        +Y + A  L++V G++G +SL      AIGA
Sbjct: 317 AVWGLAALALALPLVVRQPYLLQTLGNAWLYALLALSLTLVAGTVGQVSLGHAGLLAIGA 376

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L    G+ + L +P++ +++ A G  +  P+ + RG Y++IATL + EI   +++
Sbjct: 377 YASALLALDAGVPVLLAVPLAGLVAAALGTALVYPAFRLRGHYVSIATLAVGEIVTLVIL 436

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W+ +T G  G+     L                    ++   ++Y+V L +  + A++ 
Sbjct: 437 NWESLTRGPIGVTGIPPLS--------------VAGKPLVSGQWVYWVPLVLLLVFAALQ 482

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L  + +    R IR++  A  S    +   K  AFAV+    G+ GA  A     I+ 
Sbjct: 483 SRLLNSHLGRTLRAIREDDVAARSYGVDLNRYKGLAFAVAGFVAGVGGALMAHFYSYINH 542

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F    +++ +++VILGG+ +++      A+L+G+ EL      Y              
Sbjct: 543 ETFPAPVSMLALTMVILGGLGNVAGAVLGAAVLVGLPELFRAAAEY-------------- 588

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
               +  + L L+I  R   LL  
Sbjct: 589 -RMLIYGVVLLLLIRFRPQGLLGT 611



 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 107/309 (34%), Gaps = 25/309 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  +   IY + A GL+++ G   L++      Y +GAY   +  ++  L + +  
Sbjct: 11  DYTINGLVIGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAYIGWLCVTKLNLPLPVTF 70

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V A   G  G ++    L+   +   IA L+ +     +L +   +             
Sbjct: 71  VVVAAGCGLLGAVIERVGLRPLRNAPRIAPLLATIGLSVVLDQSAQLLFSPD-------- 122

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + + +  +R              +       +A +  +LR T +  A R    +
Sbjct: 123 ---PRALPTQLPTWRIAIGGGSIGALDLLIAGVGIGSAALLYGFLRFTKLGWAVRATALD 179

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A       +     + FA++SA  G++G       + I P+M  F   +  I   ++G
Sbjct: 180 RDAAQQCGVDVDKVNRTVFAIASALGGVSGLLVGMYYNTIDPNM-GFQAGLKGIVAQLIG 238

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++      + +L  +      +                        +AL L++++R 
Sbjct: 239 GVGNVPGAIAGSLLLGLIESYGIALFG-------------TSYRNLFAFVALILILVLRP 285

Query: 337 HSLLRLRTP 345
           + L      
Sbjct: 286 NGLFAGTRR 294


>gi|328886344|emb|CCA59583.1| Branched-chain amino acid transport system permease protein LivM
           [Streptomyces venezuelae ATCC 10712]
          Length = 494

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 62/320 (19%), Positives = 124/320 (38%), Gaps = 12/320 (3%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                ++    G+  +   + A G++++ G+ G LS+      A+GAY Y          
Sbjct: 31  PFYLDRFWLQAGLFAMAAALGAIGINLLTGATGQLSMGHAFFLAVGAYGYCAFAGDGADG 90

Query: 92  I-------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
           +       WL   ++  ++G  G +    + + RG YL IATL +  I Q++L     +T
Sbjct: 91  LAGLGLPGWLAAVLAVALAGLAGGVFSPIAGRLRGAYLGIATLALIFIGQHVLFNAHDLT 150

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G  G  V     F  T   + +   + P   V    ++    L +          + R 
Sbjct: 151 GGYNGRAVPPLSLFGLTFDDTELLVAQVPFGAVEKLWYL---GLVLLLAGFLFARGVLRG 207

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
               A   IRD++ A   +   +   + + F +SS + G+AG   A    R  P+ F  +
Sbjct: 208 RPGRAMNAIRDHRIAAGVMGIPVARYRAAVFVLSSMYAGLAGVLLALVFQRTVPEYFGMA 267

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--YYFNSLLKFDCSFNMRHTT 322
            ++  ++++++GG+ S++        +  + +L    +      ++      +       
Sbjct: 268 LSLEYLAMIVIGGLGSVAGAVAGGVFVSLLPQLLNRYSDALPLVSAPGTGGIAPGEAARY 327

Query: 323 LMVIALFLVILMRSHSLLRL 342
           L   A+  V+L     L  L
Sbjct: 328 LYGAAVVAVVLFLPGGLAGL 347


>gi|296136848|ref|YP_003644090.1| inner-membrane translocator [Thiomonas intermedia K12]
 gi|295796970|gb|ADG31760.1| inner-membrane translocator [Thiomonas intermedia K12]
          Length = 373

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 87/346 (25%), Positives = 155/346 (44%), Gaps = 19/346 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              +      L+ L +    +      +    ++Y+M A GL+IVVG  GLL L  +  Y
Sbjct: 7   WVWIVAGAAALIALPMVLQIAGDAWVRIAAFAMLYIMLALGLNIVVGLAGLLDLGYIAFY 66

Query: 75  AIGAYSYVILGSR----------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           A+GAY Y +L S                 + +SIWL++P++A ++ + G+ +G P LK R
Sbjct: 67  AVGAYLYALLSSNQLTSNFDALGAMFPNGFDVSIWLVVPMAAALAASAGIALGTPVLKLR 126

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           GDYLAI TL   EI +  +       N   G      ++ +      L +     S  + 
Sbjct: 127 GDYLAIVTLGFGEIIRIFMNNLNAPINITNGPQGISGIHGIRLFGWDLNQNINIGSFTIP 186

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                YY+ L +      +   L+ + I  AW  +R+++ A  ++       KL AF++ 
Sbjct: 187 SVAQYYYLFLVLVVFVVILSYRLQDSRIGRAWMAMREDEIAAKAMGINTRNMKLLAFSMG 246

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           + F G+AG  F+A +  +SP+ F   E+IIV+++V++GGM  +  +     +L  + E  
Sbjct: 247 ATFGGVAGVMFSAFQGFVSPESFSLLESIIVLAMVVIGGMGHIPGVILGAVLLSVLPEAL 306

Query: 299 CGMNFYYFNSLLKFD---CSFNMRHTTLMVIALFLVILMRSHSLLR 341
             M F        F        +    +  +A+ +++++R   L  
Sbjct: 307 RYMGFISDWQQHTFGHVYMDSGILRQLIYALAMIIIMILRPKGLWP 352


>gi|187777547|ref|ZP_02994020.1| hypothetical protein CLOSPO_01138 [Clostridium sporogenes ATCC
           15579]
 gi|187774475|gb|EDU38277.1| hypothetical protein CLOSPO_01138 [Clostridium sporogenes ATCC
           15579]
 gi|322804737|emb|CBZ02289.1| branched-chain amino acid transport system permease protein LivM
           (TC 3.A.1.4.1) [Clostridium botulinum H04402 065]
          Length = 314

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 88/331 (26%), Positives = 146/331 (44%), Gaps = 29/331 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +  +  L + L      + +YI  + I IL+Y + +  L+ V G+ G +S+     Y IG
Sbjct: 9   IMFLIILAILLVAPFMITNQYILHIIITILLYSILSMSLNFVSGNAGQISVGHAAFYGIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL     L     + +  +++G CG+ +G+PSL+ +G+YL I TL   EI + IL
Sbjct: 69  AYTTSILMISAHLPFITAMLLGGLLAGICGIFLGIPSLRVKGNYLCIITLGFGEIVKLIL 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + W  +T G  GI       FL                     +  YY++L +  +   I
Sbjct: 129 LNWDKVTGGPMGISSIPSPEFLSIFKDKN--------------LGFYYLILLLFVVFFVI 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  +        +R+N+ A  SL   I   KL +F +SS   G+AG F+A     IS
Sbjct: 175 LYKLTYSNYGLLMLAVRENEIAATSLGINITSIKLFSFIISSFIAGIAGGFYATYVSFIS 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F F E+I ++++VI+GG  ++        +L  + EL    N Y             
Sbjct: 235 PESFMFKESITILAMVIIGGKGNIVGSIIGAIVLAIIPELLREFNDY------------- 281

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                   + L L+I+ R   +  L+    F
Sbjct: 282 --RMLFYGLGLVLMIVFRPDGIYGLKYRKKF 310


>gi|49088298|gb|AAT51554.1| PA4911 [synthetic construct]
          Length = 426

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 95/329 (28%), Positives = 155/329 (47%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V  +L+   +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 98  IVPLILVAAVIFPFFASKYLLAVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 157

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+ +   G I+G   L+  GDYLAI TL   EI + +L  
Sbjct: 158 GLALGYQYLGLGFWTVLPLAALTAAVAGAILGFXVLRMHGDYLAIVTLGFGEIIRLVLNN 217

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+      +      R        +  F     +  +  +F+Y VL  +  
Sbjct: 218 WLSFTGGPNGMPAPAPTFLGLEFGRRAKDGGVPIHEFLGIAYNPNMKFLFIYVVLFLVVL 277

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   I   L R  +  AW  +R+++ A  ++    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 278 LVLYIEHRLTRMPVGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGLAGVFFASY 337

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL               
Sbjct: 338 QGFVNPSSFNFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFAD--------- 388

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L+ I + ++++ R   L+R
Sbjct: 389 ------IRVLLLGILMVVMMIWRPRGLIR 411


>gi|187477767|ref|YP_785791.1| ABC transporter ATP binding/permease [Bordetella avium 197N]
 gi|115422353|emb|CAJ48878.1| ABC tranpsorter, ATP binding/permease protein [Bordetella avium
           197N]
          Length = 597

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 63/323 (19%), Positives = 112/323 (34%), Gaps = 23/323 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + ++  L +       +   Y   +   + I  +   GLS V+G  G +SL       IG
Sbjct: 18  IWIMMALTVIGLALVNQLPTYYVGLLAMVGINALVCIGLSFVLG-TGQVSLGHAAFVGIG 76

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYS  IL   +G+   L IP+S  +  A    +G  +L+ +G  L +ATL          
Sbjct: 77  AYSCAILSRDFGVPTLLTIPISVALCMAVAYFLGRITLRLKGHSLPLATLAWGMAIYVCF 136

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +    IT G +G      L   G T+ +                 +  V   +  L+   
Sbjct: 137 VAAINITGGASGFSDIPPLNAFGLTLDTRG---------------ITIVAWVLVALTYLA 181

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              + R  +    + I+       +    +   K+  F +S+A   +AG  +A     +S
Sbjct: 182 YRRIYRGRVGRIAKAIKGQSTMATAFGADVPAVKMKVFVMSAALAALAGCLYAYYMRFLS 241

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F    +   + +V+LGG+             + +      +                
Sbjct: 242 PTSFTIGASFNYLIMVVLGGVAHPVGAILGAVTFMLMELGAQYLFAKVLG-------VPG 294

Query: 318 MRHTTLMVIALFLVILMRSHSLL 340
              T L  + L L++L     LL
Sbjct: 295 QMETMLFGVILILMLLRWPDGLL 317


>gi|218894006|ref|YP_002442875.1| putative permease of ABC branched-chain amino acid transporter
           [Pseudomonas aeruginosa LESB58]
 gi|218774234|emb|CAW30051.1| probable permease of ABC branched-chain amino acid transporter
           [Pseudomonas aeruginosa LESB58]
          Length = 425

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 96/329 (29%), Positives = 156/329 (47%), Gaps = 22/329 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V  +L+   +    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 98  IVPLILMAAVIFPFFASKYLLAVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 157

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W ++P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 158 GLALGYQYLGLGFWTVLPLAALTAAVAGAILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 217

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+      +      R        +  F     +  +  +F+Y VL  +  
Sbjct: 218 WLSFTGGPNGMPAPAPTFLGLEFGRRAKDGGVPIHEFLGIAYNPNMKFLFIYVVLFLVVL 277

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   I   L R  +  AW  +R+++ A  ++    +  KLSAF + ++  G+AG FFA+ 
Sbjct: 278 LVLYIKHRLTRMPVGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGLAGVFFASY 337

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL               
Sbjct: 338 QGFVNPSSFNFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFAD--------- 388

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     L+ I + ++++ R   L+R
Sbjct: 389 ------IRVLLLGILMVVMMIWRPRGLIR 411


>gi|168181328|ref|ZP_02615992.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [Clostridium botulinum Bf]
 gi|182675291|gb|EDT87252.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [Clostridium botulinum Bf]
          Length = 314

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 87/331 (26%), Positives = 145/331 (43%), Gaps = 29/331 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +  +  L + L      + +YI  + I IL+Y + +  L+ V G+ G +S+     Y IG
Sbjct: 9   IMFLIILAILLVAPFMITNQYILHIIITILLYSILSMSLNFVSGNAGQISVGHAAFYGIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL     L     + +  +++G CG+ +G+PSL+ +G+YL I TL   EI + IL
Sbjct: 69  AYTTSILMINAHLPFITAMLLGGLLAGICGIFLGIPSLRVKGNYLCIITLGFGEIVKLIL 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + W  +T G  GI       FL                     +  YY++L +  +   I
Sbjct: 129 LNWDKVTGGPMGISSIPSPEFLSIFKDKN--------------LGFYYLILLLFVVFFVI 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  +        +R+N+ A  SL   I   KL +F +SS   G+AG F+A     IS
Sbjct: 175 LYKLTYSNYGLLMLAVRENEIAATSLGINITSIKLFSFIISSFIAGIAGGFYATYVSFIS 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F F E+I ++++VI+GG  ++        +L  + E     N Y             
Sbjct: 235 PESFMFKESITILAMVIIGGKGNIVGSIIGAIVLAIIPEFLREFNDY------------- 281

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                   + L L+I+ R   +  L+    F
Sbjct: 282 --RMLFYGLGLVLMIVFRPDGIYGLKYRKKF 310


>gi|296136030|ref|YP_003643272.1| inner-membrane translocator [Thiomonas intermedia K12]
 gi|295796152|gb|ADG30942.1| inner-membrane translocator [Thiomonas intermedia K12]
          Length = 344

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 66/335 (19%), Positives = 137/335 (40%), Gaps = 30/335 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + +  + L  L  +   +   +L   +   Y+ S+     IY +   GL++V G  G L+
Sbjct: 1   MKRLPRFLPWLVPLTAAVALPWLA--RGNDYVLSVLTLAYIYAVAGLGLNLVTGYTGQLN 58

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      AIGAY+  IL   +G+  W    +S  ++   G+ +G  SL+ RG Y AI TL
Sbjct: 59  LAHAGFMAIGAYTVGILTVDHGVGFWWAFALSGFVAAIFGVPIGWLSLRLRGHYFAIFTL 118

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +  I   ++ KW  +T+G  GI                                 Y++ 
Sbjct: 119 CVGVIINLVIEKWDALTHGVVGILGIPVPP-------------GAGDLQFDSPREQYFLA 165

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L        ++L + R+ +  ++  +R+++    +L   ++  KL AF +S  + G+AG 
Sbjct: 166 LFFLVCCTWVMLRIVRSLVGRSFMAVRNSEPLAEALGIPLMRTKLLAFVLSVFYAGLAGG 225

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A +   +SPD+   +    +++ +++GG+ +++       +L  + +    M  Y   
Sbjct: 226 LYAGTIRFLSPDLANIAHTFDIVTAMLIGGIGTVAGPIVGALVLPWITQYLQFMENY--- 282

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                          +    L ++++     ++  
Sbjct: 283 ------------RMLVFGPLLVVLLIFLPAGIVGT 305


>gi|260220660|emb|CBA28423.1| High-affinity branched-chain amino acid transport system permease
           protein braE [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 374

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 85/328 (25%), Positives = 152/328 (46%), Gaps = 17/328 (5%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY- 88
                       +    L++V+ A GL+IVVG  GLL L  V  +AIGAY Y ++ S + 
Sbjct: 35  FVLQGFGNAWVRIADMALLFVLLALGLNIVVGYAGLLDLGYVAFFAIGAYMYGLMSSPHL 94

Query: 89  ---------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
                             +WL+IP+ A ++G  G+++G P+L+ RGDYLAI TL   EI 
Sbjct: 95  IETFPAIAAMFPDGMHTPLWLVIPLGAALAGIFGVLLGAPTLRLRGDYLAIVTLGFGEII 154

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           +  +       N   G    +++  L     +L +        +      YY+ L +  +
Sbjct: 155 RVFMNNLDHPVNITNGPKGINQIDSLHFFGLNLGKKLMIGDFEIASVTLYYYLFLTLVVV 214

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           S  I   L  + +  AW  IR+++ A  ++       KL AF + + F G++GA FA+ +
Sbjct: 215 SVIICHRLELSRVGRAWMAIREDEIAAKAMGINTRNMKLLAFGMGATFGGVSGAMFASFQ 274

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             ISP+ F   E+++++++V+LGG+  L  +     +L  + E+   +      ++    
Sbjct: 275 GFISPESFSLMESVMIVAMVVLGGVGHLPGVILGAVLLAALPEVLRYVAGP-LQTMTDGR 333

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
              ++    L+ +A+  V+L+R   L  
Sbjct: 334 LDASILRQLLIALAMISVMLLRPRGLWP 361


>gi|153939275|ref|YP_001389827.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [Clostridium botulinum F str.
           Langeland]
 gi|152935171|gb|ABS40669.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [Clostridium botulinum F str.
           Langeland]
 gi|295317914|gb|ADF98291.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [Clostridium botulinum F str. 230613]
          Length = 314

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 88/331 (26%), Positives = 146/331 (44%), Gaps = 29/331 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +  +  L + L      + +YI  + I IL+Y + +  L+ V G+ G +S+     Y IG
Sbjct: 9   IMFLIILAILLVAPFMITNQYILHIIITILLYSILSMSLNFVSGNAGQISVGHAAFYGIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL     L     + +  +++G CG+ +G+PSL+ +G+YL I TL   EI + IL
Sbjct: 69  AYTTSILMISAHLPFITAMLLGGLLAGICGIFLGIPSLRIKGNYLCIITLGFGEIVKLIL 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + W  +T G  GI       FL                     +  YY++L +  +   I
Sbjct: 129 LNWDKVTGGPMGISSIPSPEFLSIFKDKN--------------LGFYYLILLLFVVFFVI 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  +        +R+N+ A  SL   I   KL +F +SS   G+AG F+A     IS
Sbjct: 175 LYKLTYSNYGLLMLAVRENEIAATSLGINITSIKLFSFIISSFIAGIAGGFYATYVSFIS 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F F E+I ++++VI+GG  ++        +L  + EL    N Y             
Sbjct: 235 PESFMFKESITILAMVIIGGKGNIVGSIIGAIVLAIIPELLREFNDY------------- 281

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                   + L L+I+ R   +  L+    F
Sbjct: 282 --RMLFYGLGLVLMIVFRPDGIYGLKYRKKF 310


>gi|158313874|ref|YP_001506382.1| inner-membrane translocator [Frankia sp. EAN1pec]
 gi|158109279|gb|ABW11476.1| inner-membrane translocator [Frankia sp. EAN1pec]
          Length = 478

 Score =  119 bits (297), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 81/315 (25%), Positives = 137/315 (43%), Gaps = 31/315 (9%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI--------LGSRYGLSI 92
           ++  +I IY + A GL++VVG  GLL L  +  +AIGAY+             + + ++ 
Sbjct: 151 ALVSEIGIYALLALGLNVVVGYAGLLDLGYIAFFAIGAYTTAYVTSADAMPWHAPWQVNP 210

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           +  +PV+ +++   G+++G P+L+ RGDYLAI TL   EI Q +      +T G  G++ 
Sbjct: 211 FFALPVALVVAAVAGVVLGGPTLRLRGDYLAIVTLGFGEIVQLLANNADGVTGGPRGVFG 270

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
              L          +       S+ +  +  YY+L+ +  L   +     R+    AW  
Sbjct: 271 LPPLS---------VDLPGVHYSWGLRPLPYYYLLVVLIVLVMVVFGRWERSRTGRAWTA 321

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           IR ++ A  +     +  KL AFAV ++  G AG   A  +   +P  F    +++V++I
Sbjct: 322 IRQDEVAAEATGVATMRMKLLAFAVGASVSGFAGVVLATKQFF-NPQTFGLQSSLLVLTI 380

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           VI GGM S   +     +L G   L               D              + L++
Sbjct: 381 VIFGGMGSRLGVVLGALVLQGTAFLLR-------------DTVPPADRYIYFGAVVILMM 427

Query: 333 LMRSHSLLRLRTPSN 347
           + R   LL  R P  
Sbjct: 428 IFRPQGLLPPRGPRA 442


>gi|237793782|ref|YP_002861334.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [Clostridium botulinum Ba4 str. 657]
 gi|229261837|gb|ACQ52870.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [Clostridium botulinum Ba4 str. 657]
          Length = 314

 Score =  119 bits (297), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 87/331 (26%), Positives = 145/331 (43%), Gaps = 29/331 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +  +  L + L      + +YI  + I IL+Y + +  L+ V G+ G +S+     Y IG
Sbjct: 9   IMFLIILAILLVAPFMITNQYILHIIITILLYSILSMSLNFVSGNAGQISVGHAAFYGIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL     L     + +  +++G CG+ +G+PSL+ +G+YL I TL   EI + IL
Sbjct: 69  AYTTSILMINAHLPFITAMLLGGLLAGICGIFLGIPSLRVKGNYLCIITLGFGEIVKLIL 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + W  +T G  GI                     F   F    +  YY++L +  +   I
Sbjct: 129 LNWDKVTGGPMGISSIPSPE--------------FLGIFKDKNLGFYYLILLLFVVFFVI 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  +        +R+N+ A  SL   I   KL +F +SS   G+AG F+A     IS
Sbjct: 175 LYKLTYSNYGLLMLAVRENEIAATSLGINITSIKLFSFIISSFIAGIAGGFYATYVSFIS 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F F E+I ++++VI+GG  ++        +L  + E     N Y             
Sbjct: 235 PESFMFKESITILAMVIIGGKGNIVGSIIGAIVLAIIPEFLREFNDY------------- 281

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                   + L L+I+ R   +  L+    F
Sbjct: 282 --RMLFYGLGLVLMIVFRPDGIYGLKYRKKF 310


>gi|152994763|ref|YP_001339598.1| inner-membrane translocator [Marinomonas sp. MWYL1]
 gi|150835687|gb|ABR69663.1| inner-membrane translocator [Marinomonas sp. MWYL1]
          Length = 424

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 96/331 (29%), Positives = 160/331 (48%), Gaps = 21/331 (6%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++ ++  +++   L    + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAI
Sbjct: 95  MVWIIPLVIVIGLLVPFIASKYVLTVVILGLIYVLLGLGLNIVVGLAGLLDLGFVGFYAI 154

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY   +     GL  W ++P++A+++   G I+G P L+  GDYLAI TL   EI + I
Sbjct: 155 GAYGLALGYENLGLGFWSMLPIAALMAAVAGAILGFPVLRMHGDYLAIVTLGFGEIIRLI 214

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTT------VRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           L  W   T+G  G+      +F           ++   FF  P       +F+Y VL  +
Sbjct: 215 LTNWASFTHGPNGVSAPLPTFFGLEFKRRSSDGQTFHEFFNIPYDSAYKYMFIYIVLFAV 274

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
            +    I   L +  I  AW  +R+++ A  SL    +  KLSAF + ++  G+AG FFA
Sbjct: 275 VWAVLFIKHRLVKMPIGRAWEALREDEIACRSLGLNHVLVKLSAFMLGASTGGLAGVFFA 334

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             +  ++P  F F E+ ++++IV+LGGM S   +  A   L  + E+      Y      
Sbjct: 335 TYQGFVNPSSFTFFESALILAIVVLGGMGSTLGVVIAAFCLTVLPEVLREFAEY------ 388

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                       +  I + ++++ +   ++R
Sbjct: 389 ---------RVLMFGILMVVMMIWKPRGIVR 410


>gi|257784340|ref|YP_003179557.1| inner-membrane translocator [Atopobium parvulum DSM 20469]
 gi|257472847|gb|ACV50966.1| inner-membrane translocator [Atopobium parvulum DSM 20469]
          Length = 401

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 65/338 (19%), Positives = 117/338 (34%), Gaps = 19/338 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              I  +L  ++       +G     +Y   +  QI +YV+    L+IV G LG L L  
Sbjct: 34  RYAINAILVALFVFGGNFLVGEGLISRYQTVVFEQIGVYVLMTVSLNIVTGYLGQLPLGH 93

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               +IG Y+  I   R      L    +  ++      + L  +      +  A + M 
Sbjct: 94  AGFMSIGGYACAIFIIRMMPLFGL---DAQSMASGSTPAVILFVVGLLFGGICAALMGMV 150

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV-LLG 189
                + ++   +     G     R+  +        +     S       +  Y+    
Sbjct: 151 IGIPALRLRGDYLAIITLGFAEIIRVVLVNIDSALGFKLTGGASGLTGIPAYTGYLNTAI 210

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+   I  L ++    A   IRDN+ A  +      + K  AF  S+   G+AG  +
Sbjct: 211 VVSLAIFAIHTLMKSRHGRAILAIRDNEIAAEASGVNTTYYKTLAFVFSAFIAGIAGGLY 270

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A     ++P  F F +++ ++ +V+LGGM S+     +  +L  + E       Y     
Sbjct: 271 AGCIGVMAPAKFGFMKSVEILVMVVLGGMGSMFGSVVSATVLTVLPEALRAFADY----- 325

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                           I L LV++ R   L      S 
Sbjct: 326 ----------RMVAYAIVLILVMIFRPEGLFGSYDFSL 353


>gi|146342120|ref|YP_001207168.1| putative high-affinity branched-chain amino acid transport system
           permease [Bradyrhizobium sp. ORS278]
 gi|146194926|emb|CAL78951.1| putative high-affinity branched-chain amino acid transport system
           permease protein [Bradyrhizobium sp. ORS278]
          Length = 357

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 67/343 (19%), Positives = 145/343 (42%), Gaps = 27/343 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           +IF  + ++   I  ++ + +              ++  S+ IQI I+ + A GL+I+VG
Sbjct: 21  TIFPTKTSRNFAIAGVILLCFA--------PQVFSEFWLSIAIQIGIFSIAALGLNILVG 72

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G +S+     + +GA++   + + Y + ++  IP++ +I+   G++ GLP+ + +G Y
Sbjct: 73  FTGQISIGQAGFFLLGAFTSAYINNTYAIPVFFAIPLAGVITALVGLVFGLPAARLKGLY 132

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           L IATL    I  +   + +  + G           F  T                    
Sbjct: 133 LVIATLAAQYILLDFFSRAEWFSGGSVPASANPFSIFGYTLRGDRQY------------- 179

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +YV+L    +   ++  L RT    A   IRD+  +   +   +   +  +F +++ F
Sbjct: 180 --FYVVLAYVLVCYILVTNLMRTRDGRALIAIRDHYLSAEIMGINLTKYRTLSFGLAAFF 237

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AGA +A  +  +S + F    +I+ ++++I+GG  S+      TA ++ + E    +
Sbjct: 238 AGIAGALYAHYQLVVSQEGFGIERSILFLAMIIIGGTGSIMGTLMGTAFVVLLPESMELL 297

Query: 302 NFYYFNS----LLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           + Y         L  + +        + + +   ++     L 
Sbjct: 298 SHYLKGGAIDKALALNNNITFLREIAIGLIIIAFLMFEPDGLA 340


>gi|148264183|ref|YP_001230889.1| inner-membrane translocator [Geobacter uraniireducens Rf4]
 gi|146397683|gb|ABQ26316.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Geobacter uraniireducens Rf4]
          Length = 337

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 69/324 (21%), Positives = 137/324 (42%), Gaps = 29/324 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++  +    L L +    S  Y+ ++ + + I  M A  L++++G  G +SL     + +
Sbjct: 21  VIKFIIFAALILLVPLIFSGGYMMNVLVFVGINTMLAVALNLLLGFTGQISLGQAAFFGL 80

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY   +L + + ++ WL + ++A+  G     +G P LK +G YLA+ATL +  I   I
Sbjct: 81  GAYVSGVLTASHSVNPWLAMVIAAISIGLIAFFIGFPILKLKGHYLAMATLGLGIIVYII 140

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
             +   +T G +G+     L        +  +               YY++     +   
Sbjct: 141 FNETVELTGGPSGLSGIPNLSLGKLAFDNDYKN--------------YYLIWTFTLVIML 186

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           + + L  + I  A R I D++ A   +       K+  F +S+    +AG+ +A +   I
Sbjct: 187 LSINLVNSRIGRALRAIHDSEVAARVMGVNARLLKVQVFTLSAVVSSLAGSLYAHTMTFI 246

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP  F F+ +I ++++VI+GG+ S+        +L  + E+      Y            
Sbjct: 247 SPASFGFNFSIELVTMVIIGGLGSIYGSFLGAVLLTLLPEILRAFQDY------------ 294

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
                 +  + L L+ +     L+
Sbjct: 295 ---DIVIYGLLLILMTMFMPGGLV 315


>gi|219849302|ref|YP_002463735.1| inner-membrane translocator [Chloroflexus aggregans DSM 9485]
 gi|219543561|gb|ACL25299.1| inner-membrane translocator [Chloroflexus aggregans DSM 9485]
          Length = 352

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 83/320 (25%), Positives = 140/320 (43%), Gaps = 10/320 (3%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  +L+   +    + +Y  ++   I I  + A GL+I+VG  G +S+      A+GAY 
Sbjct: 26  IVLVLVLALIFPWFADRYWLNLANTIAIAAIGAIGLNILVGYTGQISIGHGGFLAVGAYI 85

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             ++    G  +WL IPV++  + A G   GLPSL+ +G YLAIATL   EI   +L   
Sbjct: 86  AGLMAVHLGTPMWLTIPVASFFTAAVGAFFGLPSLRLKGLYLAIATLASQEIIIWLLTHG 145

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           K +  G++          L     S   F          +   Y+V L +   +   +  
Sbjct: 146 KLLGIGES----------LTLPRASNNLFGLPMEWLGNNDFAFYWVCLILLIGTVIFVSN 195

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L RT    A+  IRD   A   +   +   KL AFA SS F G+AGA  A  R  IS + 
Sbjct: 196 LFRTRAGRAFVAIRDQDIAAQVIGVDLFRYKLLAFATSSFFAGLAGALTAHYRGVISWER 255

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F    +I+ ++++I+GG+ S+S      A +  +  L   +     + +   +       
Sbjct: 256 FTIDTSILYLAMIIIGGLGSVSGSIYGAAFMTLLPALLSNLARALSDVVPNINSYLPYMQ 315

Query: 321 TTLMVIALFLVILMRSHSLL 340
                +A+ L ++     ++
Sbjct: 316 QGAFGLAIILFLIFEPEGIV 335


>gi|121607604|ref|YP_995411.1| ABC transporter-like protein [Verminephrobacter eiseniae EF01-2]
 gi|121552244|gb|ABM56393.1| ABC transporter related [Verminephrobacter eiseniae EF01-2]
          Length = 647

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 16/292 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             V  L L   +       Y   M   I+IY +  +GL IVVG  G +SL     + +GA
Sbjct: 8   IAVPGLALLAAMPLFIGNPYYIHMIGTIMIYAILLFGLDIVVGYTGQVSLGHAGLFGVGA 67

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L  + G  +WL++     ++   G ++ LP+L+  G YLA+ TL    I Q ++ 
Sbjct: 68  YTAGVLFLKLGAPLWLIMVACIGVTAVFGALLALPALRVSGPYLAMVTLAFGTIIQILIN 127

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +   +T G  GI +            +                  Y+++L +  L+  ++
Sbjct: 128 EMGFLTEGPLGIKIPKPSIAGMKLDDN----------------GFYWLVLALMALALLVV 171

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + R+    A+  +R +  A   +  ++   K+ AF +S+ F G+AG  +A S   ISP
Sbjct: 172 DRILRSHYGRAFEALRGSPVASDCMGVSVYRYKVYAFVISAGFAGLAGGLYAYSEQYISP 231

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           + + F   ++ +  VI+GG  + S      AI++ + +L   +  +   + +
Sbjct: 232 NTYNFELTVLFLLAVIMGGRKTRSGALLGAAIIVILPKLLDDLELFRIVASV 283


>gi|170746744|ref|YP_001753004.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831]
 gi|170653266|gb|ACB22321.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831]
          Length = 682

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 76/371 (20%), Positives = 149/371 (40%), Gaps = 45/371 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+++  +L  + +V  L +F       +  Y   + + I IY +   GL IVVG  G +S
Sbjct: 19  LSRHMGVLGAVLLVVGLAVF---PHVVTSSYYIHLMVVIAIYAILILGLDIVVGYTGQVS 75

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L     + +GAYS  +L   + L IW  I     ++ A G+++ +P+L+  G YLA+ TL
Sbjct: 76  LGHAGLFGVGAYSAAVLFLHFKLGIWWGILAGIGVTSAFGVLLAVPALRVTGPYLAMVTL 135

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I Q  + +  P+TNG  GI +        + +         P      ++  YY++
Sbjct: 136 AFGTIVQIFINELTPLTNGPLGITLPPARVLDFSLLGLQA-----PWGAAGRKLEFYYLV 190

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                 +  ++  + R+    A+  +RD+  A   +  ++   K+ AF +S+A  G+AGA
Sbjct: 191 CLALLATILVVNRVVRSPYGRAFEALRDSPIACDCMGVSVYRYKVYAFVISAALAGLAGA 250

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            FA S   ++P+ + F   ++ +  V +GG  S +     +AI++ +  +   +      
Sbjct: 251 LFAWSERYVAPNSYGFELTVLFLLAVTMGGRKSRAGPIIGSAIIVMMPNVLADIGLVRIM 310

Query: 308 SLLKFDC-------------------------------------SFNMRHTTLMVIALFL 330
           + +                                         S      T+  + +  
Sbjct: 311 AGIIAAAALVVGGLAFLRRRENRYALLVPVGLCLAFFPATLALESVTDFRLTVFGLMILF 370

Query: 331 VILMRSHSLLR 341
           V+      ++ 
Sbjct: 371 VVYYLPDGIVG 381


>gi|95930558|ref|ZP_01313293.1| inner-membrane translocator [Desulfuromonas acetoxidans DSM 684]
 gi|95133393|gb|EAT15057.1| inner-membrane translocator [Desulfuromonas acetoxidans DSM 684]
          Length = 332

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 70/323 (21%), Positives = 129/323 (39%), Gaps = 29/323 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L V     L +     +   Y   +   + I+V+   GL++ +G  G +SL     + +G
Sbjct: 18  LTVTLLCALIVLYPLVQDNPYTLGLSNLVAIHVIVVLGLNLFIGYAGQISLGHAAFFGLG 77

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   I    Y LS W  +   A++     +I+G+P+L+  G YLA+ATL  + +   +L
Sbjct: 78  AYGSAIGTVTYELSPWPTMFGVAVLVALLALIIGVPTLRLSGHYLAMATLGFNLVVYTVL 137

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +W  +T G +G Y    L          +RF               Y++  M  LS  +
Sbjct: 138 QQWDEVTGGVSGFYGIPSLAIGNFVFDDEVRFH--------------YLVWAMALLSLLL 183

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L L R+ +      +  ++ A  +L      +K+  F +S+    +AG+ +A   + IS
Sbjct: 184 CLNLVRSGVGRGLAALAGDETAAAALGVNTQISKVKVFVLSAVLASVAGSLYAHCYNYIS 243

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F    +  ++ +V++GGM S+        ++  + E       Y             
Sbjct: 244 PASFDIFVSTDLVIMVVIGGMGSIWGSLFGATLITLLPEWIDVFESY------------- 290

Query: 318 MRHTTLMVIALFLVILMRSHSLL 340
                +    L LV++      +
Sbjct: 291 --KDFVHGGILVLVLMFLPQGFV 311


>gi|325971926|ref|YP_004248117.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy]
 gi|324027164|gb|ADY13923.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp.
           Buddy]
          Length = 305

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 83/306 (27%), Positives = 144/306 (47%), Gaps = 20/306 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +   + I   IY + A G +I+ G  G+LSL     +AIG+Y+  IL +R+G S W  +
Sbjct: 3   NFFLLILIYAGIYALMALGQNIITGYGGMLSLTQAGFFAIGSYATAILATRFGWSFWATL 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           PV+A++S   G+++GLP+L+ +GDYLAIATL   EI +N+L  W  +TNG  GI      
Sbjct: 63  PVAALLSAFFGLVIGLPTLRLKGDYLAIATLGFGEIVRNVLNNWDKVTNGPMGIQKIPMP 122

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G T+                +    ++L+    ++  +   L R+ +  A   +R++
Sbjct: 123 VLFGFTLNPYK------------KYAFLFILIITVLIAYLLFQRLARSRMGRALTAVRED 170

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  S+   I   K+ AF + ++  G+AG+F A     ++P  + F  +I+V+ +V+LG
Sbjct: 171 EIAAQSMGINITKYKVYAFILGASVAGIAGSFQAVFTLSVTPGTYTFMVSIMVLCMVVLG 230

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM +         I+  +         Y                  L  + L ++++ R 
Sbjct: 231 GMGNFKASILGAFIIQLI--------SYLPQLTGLSSVIPPQFKQILFGLILVVMMIWRP 282

Query: 337 HSLLRL 342
             LL  
Sbjct: 283 QGLLGR 288


>gi|170740061|ref|YP_001768716.1| ABC transporter-like protein [Methylobacterium sp. 4-46]
 gi|168194335|gb|ACA16282.1| ABC transporter related [Methylobacterium sp. 4-46]
          Length = 679

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 75/359 (20%), Positives = 138/359 (38%), Gaps = 43/359 (11%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
                  +Y   +   I IY +   GL IVVG  G +SL     + +GAY+  +L  ++ 
Sbjct: 41  FPHLVGSQYYIHLVTVIAIYAILILGLDIVVGYTGQVSLGHAGLFGVGAYAAAVLFLKFK 100

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L IWL +     ++ A G+++ +P+L+  G YLA+ TL    I Q  + +   +TNG  G
Sbjct: 101 LGIWLGLLAGIGVTAAFGLLLAIPALRVSGPYLAMVTLAFGTIVQIFINEMTDLTNGPLG 160

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           I +          +   +     P       +  YY++     L+  ++  + R+    A
Sbjct: 161 ITLPPA-----RVLDFSLLGLSSPWGAAGRRLEFYYLVCACLLLTILVVNRVVRSPFGRA 215

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
           +  +RD+  A   +  ++   K+ AF +S+   G+AGA FA S   ++P+ + F   ++ 
Sbjct: 216 FEALRDSPIACDCMGVSVYRYKVYAFVISAGLAGLAGALFAWSERYVAPNTYGFELTVLF 275

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY------------------------ 305
           +  V +GG  S S      AI++ +  +   +                            
Sbjct: 276 LLAVTMGGRKSRSGPLIGAAIVVMMPNILADIELVRMMAGGIAALAVAILAVAFLRRREN 335

Query: 306 -------------FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR-LRTPSNFLE 350
                        F        S      T+  + +  V+      ++  LR    FL 
Sbjct: 336 RFALLVPALLCIAFFPATLALQSVTDYRLTVFGLMILFVVYYLPEGIVGYLREKLPFLR 394


>gi|256425031|ref|YP_003125684.1| ABC transporter [Chitinophaga pinensis DSM 2588]
 gi|256039939|gb|ACU63483.1| ABC transporter related [Chitinophaga pinensis DSM 2588]
          Length = 615

 Score =  118 bits (296), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 63/321 (19%), Positives = 119/321 (37%), Gaps = 26/321 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
           + LL         +  Y  S  ++I I+ +FA   +I+ G  GLLS    + +  G Y +
Sbjct: 10  FFLLFIPLTAGAFANAYFQSFIMEIFIWSLFAMSFNIIYGYTGLLSFGVSLFFGAGCYGF 69

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +    + LSI   +  +  ++ A   + GL  LK R  Y  I +++++ I   +   + 
Sbjct: 70  ALSLIHWQLSIPGALLFAIALTTALATLTGLLVLKIRSHYFVIVSVLLTLIPFYLANHFP 129

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            IT G  GI            V+   +              MY+ +  +  L   +    
Sbjct: 130 QITGGDDGIS-----------VQLSDKLIPGTGLSPYNPRHMYWTVCSLAILVLFLCYRF 178

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            ++ +    + +R+N+     L       +  A+ VS+   G+AG+ +  +    S   F
Sbjct: 179 LKSPVGLILKGLRENEVRAQFLGYNTHRYQFLAYIVSAVLAGIAGSLYVLAFKYTSSIFF 238

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            +S +   I   I GG  +       TA  +   +       YY                
Sbjct: 239 LWSLSGEAIIWTISGGRGTFLGPFIGTAGFLLFKDELSSRVEYYP--------------- 283

Query: 322 TLMVIALFLVILMRSHSLLRL 342
            ++ I L L+I  R + L+ +
Sbjct: 284 LIVGICLILLIRYRKNGLMGM 304


>gi|317121495|ref|YP_004101498.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Thermaerobacter marianensis DSM 12885]
 gi|315591475|gb|ADU50771.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Thermaerobacter marianensis DSM 12885]
          Length = 381

 Score =  118 bits (296), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 83/340 (24%), Positives = 139/340 (40%), Gaps = 42/340 (12%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              ++     +   ++   L A    ++ +++ + + I V+ A  L IV+G  G  S+  
Sbjct: 7   RTALIAAGLALVYGVVQFLLSAGILGRFYENVLMNVGINVLAAVSLHIVLGLAGQFSIGH 66

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A+GAY+  +L  + G+   + +   A  +   G+I+G+PSL+ RGDYLAIATL  +
Sbjct: 67  AGFLAVGAYTSAVLTEKLGVPFAVALLAGAAAALVAGLIVGIPSLRLRGDYLAIATLGFA 126

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           EI + IL+    +  G AG+ VA    +    +  +                        
Sbjct: 127 EIVRIILLNVDYV-GGAAGMRVAHLTSWTSLYLSVVAAVLVAV----------------- 168

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                       R+A   A   +RD++ A  ++       K+ AFA+SS F G+AG   A
Sbjct: 169 ---------HFTRSAHGRATLALRDDEVAAAAMGVNTTAYKVLAFALSSFFAGLAGGLHA 219

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            +   I P+ F F ++  ++  V+LGG+ SL     A   L  V                
Sbjct: 220 HNFYVIQPNNFGFLKSFEILVFVVLGGVGSLPGAILAATFLTLVSTALQAY--------- 270

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                       L  + L LV+L R   LL  +T + F  
Sbjct: 271 ------PEARMILYSLVLILVMLFRPQGLLGTQTLAGFFP 304


>gi|332294992|ref|YP_004436915.1| ABC-type transporter, integral membrane subunit [Thermodesulfobium
           narugense DSM 14796]
 gi|332178095|gb|AEE13784.1| ABC-type transporter, integral membrane subunit [Thermodesulfobium
           narugense DSM 14796]
          Length = 340

 Score =  118 bits (296), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 79/329 (24%), Positives = 143/329 (43%), Gaps = 29/329 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
              ++ L      S +Y   +     IYV+ + GL+IV G  GLL L  +  YA+GAY+Y
Sbjct: 28  ILFVVALVYPFLASSQYYVHIMNLAFIYVVLSLGLNIVCGLAGLLDLGFIAFYAVGAYTY 87

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            IL  + GLS W ++P++   +   G+++G  + + RGDY AI T+   EI + +     
Sbjct: 88  AILSIKLGLSFWEILPIACFATALFGLLVGSAAFRLRGDYFAIVTMGYGEIIRILANNLT 147

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +TNG  GI    R    G                       Y++ L    +S  +    
Sbjct: 148 FLTNGPIGIAGIPRPTIFGFKFED--------------PFQYYFLALSFVTISIFLTYRF 193

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
           + + I  A   IR+++ A  S+   +   KL +F + +   G  G FFA+    +SP+ F
Sbjct: 194 QASRIGRALEAIREDEIAAVSMGVNLKNFKLISFIIGAMLGGSIGVFFASYATFVSPESF 253

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F E+++V+++V++GGM ++        IL+ + E    ++ Y                 
Sbjct: 254 SFMESVMVLAMVVIGGMGTIEGPVIGALILVFLPEALRSLSDY---------------RM 298

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            +    +  ++++     +    P   L+
Sbjct: 299 LIFGALMVFMMIVMPKGFMGWIKPRRILK 327


>gi|260893443|ref|YP_003239540.1| inner-membrane translocator [Ammonifex degensii KC4]
 gi|260865584|gb|ACX52690.1| inner-membrane translocator [Ammonifex degensii KC4]
          Length = 355

 Score =  118 bits (296), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 78/324 (24%), Positives = 135/324 (41%), Gaps = 15/324 (4%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  L   L         Y   +  Q+ I  + A GL+++ G  G +S+       +GAY+
Sbjct: 34  VLCLFALLLALPWLVGPYPLRIASQVAIMALGAVGLNLLTGFAGQISVGHAAFMGVGAYT 93

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
              L ++ GLS WL +P+  + +   G   GLPSL+ +G YLAIATL    I     ++ 
Sbjct: 94  VGALTTKLGLSFWLALPLGGLAAALVGAFFGLPSLRLKGLYLAIATLAAQVILDFAFVRL 153

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           +PIT G AG+ +                        +  +   YYV+L +  +     L 
Sbjct: 154 EPITGGAAGLVLTPP---------------SLGPFSLADDTVFYYVVLALAVVGVIFALN 198

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L R+ +  A+  IRD   A   L   +   KL AF +SS + G+AG   AA    ++P+ 
Sbjct: 199 LSRSRVGRAFMAIRDRDLAAAMLGVDLFGYKLRAFFLSSFYAGLAGGMLAAYTRVVTPEQ 258

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F    +I  ++++++GG+  +       A +  +      +         +     +   
Sbjct: 259 FTLDVSIQFLAMIVIGGLGDVLGSVYGAAFVSLLPIALSYLAQALQGVFPQMVNLLSACQ 318

Query: 321 TTLMVIALFLVILMRSHSLLRLRT 344
           T L  + + L ++     L +L  
Sbjct: 319 TALFGLVIILFLIFEPQGLAKLWR 342


>gi|163856026|ref|YP_001630324.1| branched chain amino acid ABC transporter [Bordetella petrii DSM
           12804]
 gi|163259754|emb|CAP42055.1| Putative branched-chain amino acid transport system protein
           [Bordetella petrii]
          Length = 609

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 58/325 (17%), Positives = 128/325 (39%), Gaps = 22/325 (6%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L + + +LL +    + + ++  +    I +  + A GL ++ G  GL S        +
Sbjct: 4   ILLIAFIVLLAVLPMVSATPEFWITQLNYIGLAALVALGLVLLTGVGGLTSFGQAAFVGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  ++ S YG S WL +PV  +++ A   ++G+ +L+  G YL + T+        +
Sbjct: 64  GAYTTAVMTSHYGASPWLALPVGLLLTAAVAYLLGIITLRLSGHYLPLGTIAWGLSLYFL 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                 +     GI   + +   G ++ S                 +YY++     LS  
Sbjct: 124 FGNLDWL-GKHDGIAGLEPISVFGFSLASGRH--------------IYYLIWICLLLSLW 168

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               L  +    A R ++       S+       K+  F  ++    ++G  +A  +  +
Sbjct: 169 ATSNLLSSRPGRAIRALKSGAGMAESMGVNTGSYKVVIFVWAALLACLSGWIYAHMQRAV 228

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP  F  +  I  + + ++GG   +      +A+++G+ +    +     ++   F    
Sbjct: 229 SPSPFGLNYGIEYLFMAVVGGAGHVWGAVVGSAVILGLKDQLQNLLPALLDTDANF---- 284

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 +  + L LV+   ++ L  
Sbjct: 285 ---ELIVFGVLLILVLQYAANGLWP 306


>gi|150019852|ref|YP_001312106.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052]
 gi|149906317|gb|ABR37150.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052]
          Length = 321

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 79/341 (23%), Positives = 139/341 (40%), Gaps = 41/341 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            NK +  + +  ++   +LF  + A     Y   +    LI V+ A  L+++VG  G L 
Sbjct: 5   FNKKNICIIVGVLITYGVLFGLISAKVINSYYKGIITFALINVILAVSLNLIVGFTGQLC 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      +IGAY   I+  +  +     I + A+++     ++G P+LK  GDY AI TL
Sbjct: 65  LGHAGFMSIGAYVSAIITQKAHMPFVASILIGAVVACILAALVGYPTLKLTGDYFAITTL 124

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              +I Q +++    +  G  G+                                   V 
Sbjct: 125 AFCQIIQIVIMNIDTV-GGARGLTGIPTKTTFT-------------------------VA 158

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                 S  II  +  ++   A  +IR+N+ A  S+    +  K+ AF +++ F G+AG 
Sbjct: 159 FIFMIASIVIIKNIINSSQGRAMLSIRENEIAAESMGINALKYKMMAFVIAAFFAGLAGG 218

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A     I PD+F F+++I  ++ V+ GGM SLS    +  +L  + EL   M  +   
Sbjct: 219 LYAHYSGYIKPDLFDFNKSIDYLTFVVFGGMGSLSGSIISAIMLTFLPELLRSMGDF--- 275

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                          +  +AL L+++ R   L   +  S  
Sbjct: 276 ------------RMVIYPLALILLMIFRPEGLFGDKEISLK 304


>gi|27378535|ref|NP_770064.1| ABC transporter ATP-binding/permease protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27351683|dbj|BAC48689.1| ABC transporter ATP-binding/permease protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 589

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/323 (15%), Positives = 111/323 (34%), Gaps = 21/323 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
                 L+ L +       +  ++   I IY + A GL+++ G  G++S        + A
Sbjct: 8   LAAMAALVCLAVAPFVLSPFSITLMNYIGIYSLVAIGLALLTGVGGIVSFGQAAFVGVAA 67

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+   + +  G S WL +     ++ +   I+G+ +L+ +G +L+++T+        +  
Sbjct: 68  YATAWVSALNGYSPWLGLLFGVALTCSVASILGVVTLRLQGHFLSLSTVAWGLAIGFLFG 127

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
             + +     GI     +                 S  ++    +Y+++ G+      + 
Sbjct: 128 NVEGL-GRFNGISSIPPIS--------------IGSIALVSSAQIYFLIWGIVAAVLLLG 172

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L  + +  A R +R       SL       KL  F +++    ++G  +A     ISP
Sbjct: 173 YNLLDSRLGRAMRALRGGNTLVESLGINAFQIKLVTFVIAAFLASLSGWLYAHMSRFISP 232

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F     I  + + ++GG  SL       A++  +                    +   
Sbjct: 233 GPFDAGMGIEYLMMSMVGGAGSLLGGVVGAAVVTLLKNSVQDYLPLIAKG------ASGQ 286

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
                      L +      ++ 
Sbjct: 287 LEIVAFSALFILFLQWARQGIVP 309


>gi|254384243|ref|ZP_04999587.1| branched chain amino acid transport permease [Streptomyces sp. Mg1]
 gi|254387261|ref|ZP_05002522.1| branched chain amino acid transport permease [Streptomyces sp. Mg1]
 gi|194343132|gb|EDX24098.1| branched chain amino acid transport permease [Streptomyces sp. Mg1]
 gi|194346067|gb|EDX27033.1| branched chain amino acid transport permease [Streptomyces sp. Mg1]
          Length = 576

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 77/347 (22%), Positives = 134/347 (38%), Gaps = 28/347 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +  +        F    +S      + + ILI+   A GL++VVG  GLL L  V    +
Sbjct: 227 VTLIGSAAAAIAFPFIQQSGDTYTLIAVNILIFATVALGLNVVVGLAGLLDLGYVAFLGV 286

Query: 77  GAYSYVILGSR------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           GAY+  ++         + L  W  + V A+ S   G+++G P+L+ RGDYLAI TL   
Sbjct: 287 GAYAAALVSGSTASAFGFQLPFWAAVIVGALASLIFGVVIGAPTLRLRGDYLAIVTLGFG 346

Query: 131 EIFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           EIF+  +      +      G      +  L     +           +      Y+++L
Sbjct: 347 EIFRIAMGNLDGTSGPDITNGPNGIPNIPHLELFGWNFGESHNVGGIVLGAYANYYFLML 406

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  L   +      + I  AW  IR+++ A  ++       KL AFA+ +   G+AG  
Sbjct: 407 LVMALVILVFARAGNSRIGRAWVAIREDETAAEAMGINGFKVKLIAFALGATLAGLAGTV 466

Query: 249 FAASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
            A     + P+ + F+      +  +++ VILGGM ++       A+L  +      +  
Sbjct: 467 QAHVNSTVVPENYVFAGPVPPNSAFLLAAVILGGMGTIRGPILGAALLFLIPAKLAFLQD 526

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           Y                     IAL L++  R   L+  +       
Sbjct: 527 Y---------------QLLAFGIALILLMRFRPEGLIANKRAQLEFH 558


>gi|220921170|ref|YP_002496471.1| ABC transporter-like protein [Methylobacterium nodulans ORS 2060]
 gi|219945776|gb|ACL56168.1| ABC transporter related [Methylobacterium nodulans ORS 2060]
          Length = 678

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 68/312 (21%), Positives = 135/312 (43%), Gaps = 5/312 (1%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
           +   L+     +L         + +Y   +   I IY +   GL IVVG  G +SL    
Sbjct: 23  RFAGLIGAGLLVLFLAAFPHVVTSQYYIHLLTVIAIYAILILGLDIVVGYTGQVSLGHAG 82

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            + +GAY+  +L  ++ L IW+ +     ++ A G+++ +P+L+  G YLA+ TL    I
Sbjct: 83  LFGVGAYAAAVLFLKFKLGIWVGLLAGIGVTAAFGLLLAIPALRVSGPYLAMVTLAFGTI 142

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            Q  + +   +TNG  GI +        + +         P      ++  YY++     
Sbjct: 143 VQIFINEMTDLTNGPLGITLPPARVLDFSLLGLQA-----PWGAAGRKLEFYYLVCASLL 197

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +  ++  + R+    A+  +RD+  A   +  ++   K+ AF +S+A  G+AGA FA S
Sbjct: 198 ATILVVNRVVRSPFGRAFEALRDSPIACDCMGVSVYRYKVYAFVISAALAGLAGALFAWS 257

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              ++P+ + F   ++ +  V +GG  S S      AI++ +  +   +      +    
Sbjct: 258 ERYVAPNTYGFELTVLFLLAVTMGGRKSRSGPLIGAAIIVMMPNILADIALVRIMAGGIA 317

Query: 313 DCSFNMRHTTLM 324
             +  +     +
Sbjct: 318 ALALGILCVAFL 329


>gi|169830854|ref|YP_001716836.1| inner-membrane translocator [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169637698|gb|ACA59204.1| inner-membrane translocator [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 335

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 68/341 (19%), Positives = 131/341 (38%), Gaps = 20/341 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +N + K   ++ V+  + LF          Y   + +   +Y + A GL +++G  G +S
Sbjct: 1   MNYWAKNKNIILVLLVVTLFALFPLVVKSSYFLGIFVIAGLYSIVAVGLGLLLGYAGQVS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                 Y +GAY+  IL   YG    L +  +  +      ++G P L+ R  YL + TL
Sbjct: 61  FGQAAFYGLGAYTAAILSGTYGWPPLLALAAAPFLPAVVAAVIGRPILRLREHYLVLGTL 120

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               +   +L ++  +T G +G      L                    +  ++  +Y++
Sbjct: 121 GFGILVYILLKEFVGLTGGPSGYTGIPYLS--------------IGGLVLNTDVQFFYLV 166

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
               FL+      L  + I  A R I  ++ A  +        KL  F +S+   G+AG 
Sbjct: 167 WFFAFLTLVGAWNLVNSRIGRALRAIHGSEVAAEAAGIDTARLKLKVFILSAFLAGLAGG 226

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A     +SP  F F  +I  + + ++GG  ++        +++G++E         + 
Sbjct: 227 LYAFYITFVSPSPFGFHASIQFVLMAVVGGAATVWGPVVGAFVIVGLIEFLR------WA 280

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             +    +          I L LV+L R   +L  +     
Sbjct: 281 VPVVLPKAGGEFEIIFFGIILVLVLLFRPEGILSHKRRRRL 321


>gi|160900785|ref|YP_001566367.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160366369|gb|ABX37982.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 359

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 89/340 (26%), Positives = 162/340 (47%), Gaps = 18/340 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +     L++   +       ++  +    L+YV+ A GL++VVG  GLL L  V  YA+G
Sbjct: 10  ILGGLALMVLPLVLQYFGNAWV-RIADLALLYVLLALGLNVVVGYAGLLDLGYVAFYAVG 68

Query: 78  AYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           AY + ++ S +                  SIWL+IP++A+++G  G+++G+P LK RGDY
Sbjct: 69  AYMFALMASPHLADTFEGFAAMFPDGLHTSIWLVIPLAALLAGITGILLGIPVLKLRGDY 128

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LAI TL   EI +  +       N   G     ++  +      L +        +    
Sbjct: 129 LAIVTLGFGEIIRIFMNNLDQPVNITNGPKGIGQIDSVKILGLDLAKRQEIFGYDISSVT 188

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             YY+ L +  +S  I   L+ + I  AW  IR+++ A  ++       KL AF + ++F
Sbjct: 189 LYYYLFLFLVLVSIVICWRLQDSRIGRAWMAIREDEIAAKAMGINTRNMKLLAFGMGASF 248

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G++GA FAA +  +SP+ F   E+I+++++V+LGG+  L  +     +L  + E+   +
Sbjct: 249 GGVSGAMFAAFQGFVSPESFSLMESIMIVAMVVLGGLGHLPGVILGAVLLSALPEVLRYV 308

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  +       ++    L+ +A+ +++LMR   L  
Sbjct: 309 AGP-LQQMTDGRLDASILRQLLIALAMIVIMLMRPRGLWP 347


>gi|170758205|ref|YP_001785797.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169405194|gb|ACA53605.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 314

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 89/331 (26%), Positives = 147/331 (44%), Gaps = 29/331 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +  +  L + L      + +YI  + I IL+Y + +  L+ V G+ G +S+     Y IG
Sbjct: 9   IMFLIILAILLVAPFMITNQYILHIIITILLYSILSMSLNFVSGNAGQISVGHAAFYGIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL     LS  + + +  +++G CG+ +G+PSL+ +G+YL I TL   EI + IL
Sbjct: 69  AYTTSILMINAHLSFIIAMLLGGLLAGICGIFLGIPSLRIKGNYLCIITLGFGEIVKLIL 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + W  +T G  GI       FL                     +  YY++L +  +   I
Sbjct: 129 LNWDKVTGGPMGISSIPNPEFLNIFKDKN--------------LGFYYLILFLFVIFFVI 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  +        +R+N+ A  SL   I   KL AF +SS   G+AG F+A     IS
Sbjct: 175 LYKLTYSNYGLLMLAVRENEIAATSLGVNITSIKLFAFIISSFIAGIAGGFYATYVSFIS 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F F E+I ++++VI+GG  ++        +L  + E     N Y             
Sbjct: 235 PESFMFKESITILAMVIIGGKGNIVGAIIGAIVLAIIPEFLREFNDY------------- 281

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                   + L L+I+ R   +  L+    F
Sbjct: 282 --RMLFYGLGLVLMIVFRPDGIYGLKYRKKF 310


>gi|300310522|ref|YP_003774614.1| branched-chain amino acid ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300073307|gb|ADJ62706.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 404

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 98/377 (25%), Positives = 172/377 (45%), Gaps = 40/377 (10%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ N     + LL ++  +++F F+       ++  +    L+Y+M A GL++VVG  
Sbjct: 6   FDMKRNPQQARISLLLLLALMIVFPFVAQQFGNSWV-RIMDVALLYIMLALGLNVVVGFA 64

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRY--------------------------------GLS 91
           GLL L  +  YAIGAYS  +L S                                   LS
Sbjct: 65  GLLDLGYIAFYAIGAYSAGLLASPQFAAVIESFVNTYPSVGNFLVWLCGPEIVQNGIHLS 124

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW---KPITNGKA 148
           +WL++P+SA+++   G ++G P+LK RGDYLAI TL   EI +  +        ITNG  
Sbjct: 125 LWLIVPISALLAALFGALLGAPTLKLRGDYLAIVTLGFGEIIRIFMNNLNAPVNITNGPQ 184

Query: 149 GIYVADRLYFLGTTVRSLIRFFRF---PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           GI + D +   G ++                +      Y++ L +C       + L+ + 
Sbjct: 185 GINLIDPIKVFGVSLAGEPGSGSMVKVFGMSMPSVNAYYFLFLLLCIGVIFFSVRLQDSR 244

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +  AW  IR+++ A  ++       KL AFA+ ++F G+AGA F A +  +SP+ F  +E
Sbjct: 245 LGRAWVAIREDEIAAKAMGINTRNVKLLAFAMGASFGGVAGAMFGAFQGFVSPESFSLTE 304

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-FDCSFNMRHTTLM 324
           +I V+++V+LGG+  +  +     IL  + E+   +      ++         +    L 
Sbjct: 305 SIAVLAMVVLGGIGHIPGVVLGGVILAALPEVLRHVVEPVQMAIFGKVWIDAEVLRQLLY 364

Query: 325 VIALFLVILMRSHSLLR 341
            +A+ +++L R   L  
Sbjct: 365 GLAMVVIMLTRPAGLWP 381


>gi|89901940|ref|YP_524411.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89346677|gb|ABD70880.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 363

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 94/360 (26%), Positives = 166/360 (46%), Gaps = 18/360 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + +  KI+  L     LL+   +  +    ++  +    L+YV+ A GL+IVVG  GLL 
Sbjct: 1   MKQQQKIVVFLLAAVGLLILPLILQSFGNAWV-RIADMALLYVLLALGLNIVVGYAGLLD 59

Query: 68  LNCVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMG 111
           L  V  +AIGAY Y +L S +                   IW++IP +A ++G  G+++G
Sbjct: 60  LGYVAFFAIGAYMYGLLASPHLTETFAWIGAMFPDGLHAPIWVVIPAAAGLAGFFGLLLG 119

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
            P+L+ RGDYLAI TL   EI +  L       N   G     ++  L     +L R   
Sbjct: 120 APTLRLRGDYLAIVTLGFGEIIRVFLNNLDHPVNITNGPKGMSQIDSLSFFGLNLGRTLD 179

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                +      YY+ L +   S  I   L+ + +  AW  IR+++ A  ++       K
Sbjct: 180 IGGYELNSVSLYYYLFLALVLFSVLISHRLQLSRVGRAWMAIREDEIAAKAMGINTRNLK 239

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           L AF + + F G++G  FA+ +  ISP+ F   E+++++++V+LGG+  L  +     +L
Sbjct: 240 LLAFGMGATFGGVSGTMFASFQGFISPESFSLMESVMIVAMVVLGGIGHLPGVILGAVLL 299

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             + E+   +      ++       ++    L+ +A+  V+L+R   L         L++
Sbjct: 300 SALPEVLRYVAGP-LQAMTGGRLDSSILRQLLIALAMISVMLVRPRGLWPSPEHGKSLQQ 358


>gi|291008409|ref|ZP_06566382.1| ABC transporter permease protein [Saccharopolyspora erythraea NRRL
           2338]
          Length = 345

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 67/325 (20%), Positives = 134/325 (41%), Gaps = 29/325 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +AV   ++  LF G   +  Y   + +   IYV+ A  L++V+G  GLLSL     + +G
Sbjct: 12  VAVSVAVVGLLFAGGMLAGPYQTQIAVLAAIYVIMASSLNLVLGYSGLLSLGHQAYFGLG 71

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   I  +  G+ + L + VSA+++     ++G  +L+ R  +  IAT  ++EIF+ + 
Sbjct: 72  AYVSAIASTALGVPMVLAVVVSAVVALVVAWLIGRVTLRLRAAFFVIATFAVAEIFRQVA 131

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + W  +T G  G      +   G                ++    ++ V+  +       
Sbjct: 132 LNWVELTGGPMGYSEIPPIGMFGYE--------------LVRPKEVFPVVFAVALFIVIA 177

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           I  L  + +  + R + +N+    ++          AF++S A   +AG+ +A +   +S
Sbjct: 178 IARLASSGLGYSMRGLAENENLARAVGIDTSRNATIAFSLSGAMAAVAGSLYAHTVGFVS 237

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P++F F+  I  + +VI GGM ++        +   + E+    +               
Sbjct: 238 PEVFGFAIMINTLLMVIAGGMGTVLGPVIGAVLFTQLPEMLRFSDE-------------- 283

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                +  + L L++      L   
Sbjct: 284 -WRLVIYGLVLVLLVRFMPRGLWGT 307


>gi|119900021|ref|YP_935234.1| putative branched-chain amino acid transport permease [Azoarcus sp.
           BH72]
 gi|119672434|emb|CAL96348.1| putative branched-chain amino acid transport permease [Azoarcus sp.
           BH72]
          Length = 365

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 93/336 (27%), Positives = 158/336 (47%), Gaps = 5/336 (1%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    ++  L +   L A +  +    +    L+Y+M A GL++VVG  GLL L  +  Y
Sbjct: 17  LAARWLILILAIAAPLIAWQFGRSWVRILDFALLYMMLALGLNLVVGFAGLLDLGYIAFY 76

Query: 75  AIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           A+GAYS+  L S +    L  WL++P+ A  +   G+ +G P L+ RGDYLAI TL   E
Sbjct: 77  AVGAYSFAFLASPHFDVHLPFWLILPLGAGFAALAGIALGFPVLRLRGDYLAIVTLGFGE 136

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY-VLLGM 190
           I +  ++      N   G    + +  +      L R  R      I  +F+YY   L  
Sbjct: 137 IVRIFMLNLNYPINITNGPQGINMIDPIVLFGWDLSRNIRVTEELSINSLFLYYYFFLAF 196

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              S   I  L+ + I  AW  +RD++ A  ++       KL AFA+ + F G++G  F 
Sbjct: 197 VAGSIIFIRRLQISRIGRAWAAMRDDELAAKAIGINTRNMKLLAFALGATFGGVSGCLFG 256

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           A +  +SP+ F   E+I V+++V+ GGM +++       +L  + E+   +      ++ 
Sbjct: 257 AFQGFVSPESFSLMESIAVLTMVVFGGMGNIAGALVGAFVLALLPEILRHIAVPLQQAVF 316

Query: 311 K-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                   +    L+ +A+ L++L+R   L+  R  
Sbjct: 317 GHVLLDPEVLRMLLLSLAMILMMLLRPAGLIPARAR 352


>gi|311108062|ref|YP_003980915.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310762751|gb|ADP18200.1| inner-membrane translocator 50 [Achromobacter xylosoxidans A8]
          Length = 604

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 56/303 (18%), Positives = 124/303 (40%), Gaps = 25/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
             M   ++I ++ A G++++ G  G +SL     +AIGAY+  I    +G+   + + ++
Sbjct: 33  VQMWSFVIINILLAQGINLLTGISGQISLGHAGFFAIGAYASAIAMKSWGVPFPVALVLA 92

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
              + A G+++  P+ + R  YLA+ +L    I   +  + + +T G  G+         
Sbjct: 93  TFGAAAIGLLLAGPAGRVREFYLAMMSLGFGLIVYELARELRGVTGGVMGMRGIPSSQIG 152

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +            + I  +  + +LL +  +   ++    ++    A+  +  ++ A
Sbjct: 153 TLQI----------FGWSIDTVAYFRILLVVLLVVMLMLRNFVKSHFGRAFYAVHVSEIA 202

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             SL  +    K +A+A+S    G+AG F+A     ++P+ F    +I ++ + I+GG+ 
Sbjct: 203 AGSLGISQAAVKRAAYAISGGLAGLAGGFYAHMIGYLTPESFGLMRSIEILVMSIVGGLG 262

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           SL+       +   + +     N Y                  +  + L  +  +    L
Sbjct: 263 SLAGQVYGAVLFTYLPQKLQAFNDY---------------QYIVYGLILVFIFSLLPKGL 307

Query: 340 LRL 342
             L
Sbjct: 308 AGL 310


>gi|153955360|ref|YP_001396125.1| hypothetical protein CKL_2742 [Clostridium kluyveri DSM 555]
 gi|219855779|ref|YP_002472901.1| hypothetical protein CKR_2436 [Clostridium kluyveri NBRC 12016]
 gi|146348218|gb|EDK34754.1| LivM [Clostridium kluyveri DSM 555]
 gi|219569503|dbj|BAH07487.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 324

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 71/341 (20%), Positives = 145/341 (42%), Gaps = 41/341 (12%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++  K    +    ++   L+   +      +YI  + I I I ++ A  L+++VG  G 
Sbjct: 1   MKRRKNILFILAAVLIVFGLIQTLISLEMIDEYIVQILIIIGINIILAVSLNMIVGYTGQ 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           L+L      +IG Y+  IL  +     +L++    +++   G+I+G+P+L+ +GDYLAI 
Sbjct: 61  LALGHAGFMSIGGYTAAILTLKLDAPFFLVLIAGGLMAAFFGVIIGIPTLRLKGDYLAIT 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL   EI +  ++    +  G  G+    +                            + 
Sbjct: 121 TLGFGEIIRIAIVNSNTL-GGAEGLAGIPKKT-------------------------SFA 154

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++  +  L   I   +++++   A  +IR+++ A  S+       K+ AF  +S F G+A
Sbjct: 155 MVFFITILIIIIAYNIKKSSYGRAMLSIREDELASSSIGINTTKYKMIAFVTASFFAGIA 214

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  +A     + P  F + ++  +++ V+ GGM S+S    +TAIL  + E+   +  Y 
Sbjct: 215 GVLYAHYFMFLDPKSFDYLKSFDIVTYVVFGGMGSISGCILSTAILTSLPEILRPVADY- 273

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                            +   AL  +++ R   +  ++  S
Sbjct: 274 --------------RMVIYSAALVALMIFRPEGVFGMKEIS 300


>gi|311895445|dbj|BAJ27853.1| putative branched-chain amino acid ABC transporter permease protein
           [Kitasatospora setae KM-6054]
          Length = 660

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 76/335 (22%), Positives = 135/335 (40%), Gaps = 29/335 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG----- 85
             T++ +    +G  ILI+   A GL++VVG  GLL L  V    +GAY+  ++      
Sbjct: 322 PFTQNSETYVLIGTNILIFATVALGLNVVVGLAGLLDLGYVAFLGVGAYAAALVSGSQFS 381

Query: 86  --SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
             S   L   + + + A+ +   G+++G P+L+ RGDYLAI TL   EIF+  +      
Sbjct: 382 VFSGVHLPFPVAVLIGALAALVFGVVIGAPTLRLRGDYLAIVTLGFGEIFRIAMNNLDGR 441

Query: 144 TN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
           +      G      +  +        +   F +  +        ++L    +  ++   +
Sbjct: 442 SGPSLTNGPNGIAAIPDVNLFGFDFGQAHDFGALHLGKNGNYLLLMLVATAVVVTVFGRV 501

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             + I  AW  IR+++ A  ++       KL AFA+ +   G+AGA  A     +SPD +
Sbjct: 502 ANSRIGRAWVAIREDETAAEAMGINGFRVKLIAFALGATLAGLAGAVQAHVSGAVSPDQY 561

Query: 262 -----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
                    +  +++ VILGGM ++S      A+L  +      +  Y            
Sbjct: 562 LFSSPTPPNSAFLLAAVILGGMGTISGPLVGAALLFLIPAKLEFLQSY------------ 609

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                    +AL L++  R   L+  R        
Sbjct: 610 ---QLLAFGVALILLMRFRPEGLIPNRRQQLEYHE 641


>gi|295705056|ref|YP_003598131.1| putative branched-chain amino acid ABC transporter permease
           [Bacillus megaterium DSM 319]
 gi|294802715|gb|ADF39781.1| putative branched-chain amino acid ABC transporter, permease
           protein [Bacillus megaterium DSM 319]
          Length = 398

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 151/352 (42%), Gaps = 31/352 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  V+  +LL        + +    +   + IY+  A GL+IVVG  GLL L  V  +
Sbjct: 31  WLIAGVILIVLLPFSASQGPAYESYMEVSTLVGIYIAMALGLNIVVGLAGLLDLGFVAFF 90

Query: 75  AIGAYSYVILGSRYGLSI-------------WLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           A+GAY+Y I  +    +              W  I    +++   G+++G+P L+ +GDY
Sbjct: 91  AVGAYTYGIFATNQAANFMPFGTYPLSGESFWFFIIAGCLLAALFGILLGIPVLRVKGDY 150

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LAI TL   EI + +        N   G               S +         ++Y  
Sbjct: 151 LAIVTLGFGEIIRIVFNNLDKPINITNG-----------AMGLSSVTPPSIFGINLVYPS 199

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             YYV+L +      I+     + +  +W+ +R+N+ A  ++   ++  KL AFA+ ++F
Sbjct: 200 QFYYVVLVILAAVIFIVRRFEYSKVGRSWKAVRENEIAAQAMGIHLVRTKLLAFAIGASF 259

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI-----GVVE 296
            GM G  FAA +  + P  F   E+I ++ +VILGGM S+  +    A++       + E
Sbjct: 260 SGMMGVVFAAKQTFVDPTSFTLLESITILVMVILGGMGSVPGVILGAAVVTILNLQVLTE 319

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHT--TLMVIALFLVILMRSHSLLRLRTPS 346
           L    N    N ++    + +       +    L L  L RS  LL  + P+
Sbjct: 320 LTDWFNQLSLNGVISIPDALSPAKMQRFIFGGLLILFALYRSQGLLPAKQPT 371


>gi|86751730|ref|YP_488226.1| ABC transporter ATPase component [Rhodopseudomonas palustris HaA2]
 gi|86574758|gb|ABD09315.1| ABC transporter ATPase component [Rhodopseudomonas palustris HaA2]
          Length = 590

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 57/325 (17%), Positives = 110/325 (33%), Gaps = 22/325 (6%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L++    + L +   +     Y  ++   I I  + A GL ++ G  G+ S         
Sbjct: 8   LVSAAIAVALLILPFSGLMPDYWITLFNYIGISSLVAIGLVLLTGVGGMTSFGQAAFVGF 67

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +L   YG+S WL +P S +++    + +G  +++  G YL + T+     F  +
Sbjct: 68  GAYTTGVLTVYYGISPWLTLPASILVTMVAALAVGAITVRLSGHYLPLGTIAWGIAFFYL 127

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                 +     G+     L                    +I     + V+     L+  
Sbjct: 128 FGNLSWL-GAHDGLPGIPALKIGDY--------------ALIAPRDYFVVVWIAVVLAVI 172

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               L    +  A R +R + +A  +       AKL  F  ++   G+AG  +A  +  +
Sbjct: 173 ATQNLLSGRVGRAVRALRRSTRAAEAFGVNTAGAKLMVFVYAAMLAGLAGWLYAHFQRSV 232

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP  F  +     + + +LGG   +       A +  + +               F    
Sbjct: 233 SPGPFGITAGTEYLLMAVLGGAGRVYGAILGAAGITFLRDQLQDWLPRLLGHTGNF---- 288

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                      L L++      L  
Sbjct: 289 ---EIIAFGAVLVLLLQTAPGGLWP 310


>gi|86749878|ref|YP_486374.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86572906|gb|ABD07463.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 411

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 64/342 (18%), Positives = 126/342 (36%), Gaps = 17/342 (4%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            +L   A+V  L   +F            +  +  IY +FA G +I+ G  G LS     
Sbjct: 11  ALLIGFAIVVALGPVIFTPIGAG---YPDLLQKFAIYGIFAIGFNILFGLTGYLSFGHAA 67

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
              +G+Y+ V       + +   +  S +++G   + +G  SL+  G Y +I TL  +++
Sbjct: 68  FLGVGSYAAVWSFKLVSMDLLPAVAFSVILAGLLALAIGFISLRRSGIYFSILTLAFAQM 127

Query: 133 FQNILIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
             N+      PITNG+ G+ V  +           +          I     +Y+   + 
Sbjct: 128 CYNMAYSVLTPITNGETGLRVLRQDPRHLDAALGYVSPTPSLLGLPITGWTGFYICGAVL 187

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
             +  + + + R+      R I+ NQ              LSAF +S  F G+AG+  AA
Sbjct: 188 VAAFGLSIAIFRSPFGMTLRAIKSNQNRMGYTGYHTRPYLLSAFVISGMFAGLAGSLLAA 247

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           +   +  +  +++ +  V+ + ILGG  +L      T ++     +    N     ++  
Sbjct: 248 TDPLVGAERMQWTASGEVVLMTILGGSGTLLGPVLGTGLIKYFENIFSAYNEQQLTAVFA 307

Query: 312 F-------------DCSFNMRHTTLMVIALFLVILMRSHSLL 340
           F                        + +    V++     ++
Sbjct: 308 FLPDGVRELVVKTAGLFVGEGWQLTLGLLFMAVVIFLPGGIM 349


>gi|320011374|gb|ADW06224.1| inner-membrane translocator [Streptomyces flavogriseus ATCC 33331]
          Length = 576

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 76/334 (22%), Positives = 129/334 (38%), Gaps = 28/334 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY-- 88
             T++      + + ILI+   A GL+IVVG  GLL L  V    +GAY+  ++      
Sbjct: 235 PFTQTTDQFTLIAVNILIFATVALGLNIVVGLAGLLDLGYVAFLGVGAYTAALVSGTTAS 294

Query: 89  ----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                   W  +   A +S   G+++G P+L+ RGDYLAI TL   EIF+  +     ++
Sbjct: 295 AFDVHFPFWAAVLTGAAVSLIFGVVIGAPTLRLRGDYLAIVTLGFGEIFRITVGNLDGVS 354

Query: 145 N--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
                 G      +  L                 +      Y ++L    L   +     
Sbjct: 355 GPQVTNGPNGVPNIPDLVFFGYDFGESHTILGIELGGYANYYLLMLLAMILVVLVFSRAG 414

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            + I  AW  IR+++ A  ++       KL AFA+ +   G+AG   A  +  + P+M+ 
Sbjct: 415 SSRIGRAWVAIREDETAATAMGINGFRVKLIAFALGATLAGLAGTVQAHVQSTVVPEMYV 474

Query: 263 FS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           F+      +  +++ VILGGM ++S       +L  +      +  Y             
Sbjct: 475 FAGPVPPNSAFLLAAVILGGMGTISGPLIGATLLYMIPAKLQFLQDYQLLG--------- 525

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                   +AL L++  R   L+  R        
Sbjct: 526 ------FGLALILLMRFRPEGLIANRRAQLEFHE 553


>gi|220903752|ref|YP_002479064.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868051|gb|ACL48386.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 336

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 79/329 (24%), Positives = 144/329 (43%), Gaps = 31/329 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A    L   + +    S  Y   + + I +Y + +  L++++G  G+  +     +A+G
Sbjct: 8   IAARVALAAVICVLPLISNAYWTDVCVSIGLYALLSLSLNVILGQAGIFHMGHAAFFAVG 67

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL +     I+  +PV+  ++    +++  P +  RGDYL I T+ + EI +  L
Sbjct: 68  AYTTAILNTLCQWPIFWTMPVAGAVAAVFALLVARPIIHLRGDYLLIVTIGIVEIVRIAL 127

Query: 138 IK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           I     +T G  GI+   R               RF    ++  I  YY++ GM  +S  
Sbjct: 128 INDVFGLTGGANGIFGISRP--------------RFFGFRIVKGIQFYYLVWGMVAVSLL 173

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +   L  +    A   I+++  A       +   KL AF + + + GMAG  +AA    I
Sbjct: 174 LFYGLWHSRFGRALNYIKEDDVAAEGCGINVTHYKLMAFVLGAFWAGMAGTLYAAKMTTI 233

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP+ F F E++I+ ++VIL G  S   +  +  + IG+ EL                  F
Sbjct: 234 SPESFSFMESVIIFAVVILSG-GSQIGVLISAFLFIGLPELLR---------------EF 277

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           +     +  +A+ ++++ R   LL  R  
Sbjct: 278 SNARMLIFGLAMMVMMVWRPQGLLPPRRR 306


>gi|29832764|ref|NP_827398.1| branched-chain amino acid ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
 gi|29609884|dbj|BAC73933.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
          Length = 591

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 77/337 (22%), Positives = 135/337 (40%), Gaps = 29/337 (8%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--- 85
               T+S  +  ++G+ ILI    A GL+IVVG  GLL L  V    +GAY+  ++    
Sbjct: 247 IFPFTQSDDHNANLGVNILIVGTVALGLNIVVGLTGLLDLGYVAFLGVGAYAAALVSGSE 306

Query: 86  ----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
               +      W         S   G+++G P+L+ RGDYLAI TL   EIF+  +    
Sbjct: 307 FSRFAGVQFPFWAAALTGMGASLVFGVLIGAPTLRLRGDYLAIVTLGFGEIFRIAVNSLD 366

Query: 142 PITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
             +      G     R+  L     +L       S  V      ++++L +  L   +  
Sbjct: 367 GSSGPNLTNGPNGISRIPDLEIFGFNLGISHDVGSFTVGRFANYFFLMLIITALVVLVFT 426

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
               + I  +W  IR+++ A  ++       KL AFA+ ++  G+AG   A     ++P 
Sbjct: 427 RASDSRIGRSWIAIREDETAATAMGINGFRVKLIAFALGASLAGLAGTVSAHVGYSVNPA 486

Query: 260 MFKFS-----ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++F+      +  +++ V+LGGM +++       +L  + E    +  Y          
Sbjct: 487 PYQFAGSVPPNSAFLLAAVVLGGMGTVNGPILGATLLYLIPEKLSFLKEY---------- 536

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                      IAL L++  R   ++  R        
Sbjct: 537 -----QLLAFGIALVLLMRFRPEGIIANRRRQLEFHE 568


>gi|290961243|ref|YP_003492425.1| ABC transporter transmembrane protein [Streptomyces scabiei 87.22]
 gi|260650769|emb|CBG73886.1| putative ABC transporter integral membrane subunit [Streptomyces
           scabiei 87.22]
          Length = 611

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 76/330 (23%), Positives = 136/330 (41%), Gaps = 28/330 (8%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY------ 88
           S     ++G+ ILI+   A GL+IVVG  GLL L  V    +GAY+  ++          
Sbjct: 284 SDDQYATIGVYILIFATVALGLNIVVGLAGLLDLGYVAFLGVGAYTAAMVSGSPSSPFDI 343

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN--G 146
            L  W    + A ++   G+++G P+L+ RGDYLAI TL   EIF+  ++     +    
Sbjct: 344 HLPFWASAILGAAVAMIFGVLIGAPTLRLRGDYLAIVTLGFGEIFRITVLNMDGTSGPDI 403

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             G      +  L        +   F    +      + ++L +  +   +      + I
Sbjct: 404 TNGSNGISSIPNLNILGFDFGQEHTFLGFTIARFANYFLLMLLITLVVVIVFRRSSDSRI 463

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS-- 264
             AW  IR+++ A  ++       KL AFA+ +A  G+AG   A     ++P+ ++F+  
Sbjct: 464 GRAWIAIREDETAALAMGINGFRVKLIAFALGAALAGLAGTVQAHVTYTVTPEQYQFAAV 523

Query: 265 ---ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
               +  +++ V+LGGM ++S      A+L  +      ++ Y                 
Sbjct: 524 VPPNSAFLLAAVVLGGMGTISGPLVGAALLYLIPSKLQFLDDY---------------QL 568

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               +AL L++  R   L+  R        
Sbjct: 569 FAFGLALVLLMRFRPEGLIPNRRRQLEFHE 598


>gi|332531347|ref|ZP_08407255.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
 gi|332039211|gb|EGI75629.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
          Length = 373

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 90/319 (28%), Positives = 158/319 (49%), Gaps = 17/319 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---------- 88
              +    L++V+ + GL+IVVG  GLL L  V  +A+GAY + +L S +          
Sbjct: 31  WVRIADMALLFVLLSLGLNIVVGYAGLLDLGFVAFFAVGAYMFGLLASPHLSDNFPTFAA 90

Query: 89  ------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
                  + +WL+IP+SA ++G  G+++G P+LK RGDYLAI TL   EI +  +     
Sbjct: 91  LFPNGVHMPLWLIIPMSAALAGIFGILLGAPTLKLRGDYLAIVTLGFGEIIRVFMNNLDH 150

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
             N   G     ++  +     SL + + F    V   +  YY+ L +  +S  I   L 
Sbjct: 151 PYNITNGPKGISQIDPIHFFGFSLGQRWDFFGYTVTPVVMYYYLFLVLVVVSVIICHRLE 210

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            + I  AW  IR+++ A  ++       KL AFA+ + F G++GA FAA +  ISP+ F 
Sbjct: 211 LSRIGRAWMAIREDETAAKAMGINTRNMKLLAFAMGATFGGVSGAMFAAFQGFISPESFS 270

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
             E+I+++++V+LGG+  L  +     +L  + E+   +      ++       ++    
Sbjct: 271 LMESIMIVAMVVLGGIGHLPGVVLGAVLLASLPEMLRYVAGP-LQAMTDGRLDSSILRQL 329

Query: 323 LMVIALFLVILMRSHSLLR 341
           L+ +A+ +++L+R   L  
Sbjct: 330 LIALAMIIIMLLRPRGLWP 348


>gi|304317547|ref|YP_003852692.1| inner-membrane translocator [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779049|gb|ADL69608.1| inner-membrane translocator [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 318

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 72/339 (21%), Positives = 139/339 (41%), Gaps = 41/339 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   ++ +       ++ + L  +    Y +   + + I ++ A  L+++ G  G  SL 
Sbjct: 6   KNRLLIFIGLFAIYGIIQILLSTSILNDYYEINIVLMGINIILAVSLNLINGFTGQFSLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                +IGAY+  I+  + GL   L I V  + +G  G+++G+PSL+ +GDYLAI TL  
Sbjct: 66  HAGFMSIGAYTSAIITYKLGLPFPLAILVGGIAAGIAGILIGIPSLRLKGDYLAITTLGF 125

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            EI + I +  + +  G +G+    +                               +  
Sbjct: 126 GEIIRVIFLNTEYV-GGASGLSGIPKYTNWT-------------------------WVFW 159

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           M  ++  +I     ++       IR+++ A  S+     F K  AF + + F G+ GA +
Sbjct: 160 MAVITIVLIRNFINSSYGRCCVAIREDETAAESMGINTTFYKTLAFTIGAFFAGIGGALY 219

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A +   I P+ F F ++  ++++V+LGG+ S++    +   L  V  L            
Sbjct: 220 AHNFYIIQPETFNFMKSFDILTMVVLGGLGSITGSILSAIFLTFVYALLQDY-------- 271

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                        +  + L +V+L R   L+  +  S  
Sbjct: 272 -------AALRMVIYSLLLIVVMLFRPEGLMGTKEFSLK 303


>gi|111220206|ref|YP_711000.1| high-affinity branched-chain amino acid ABC transporter membrane
           protein [Frankia alni ACN14a]
 gi|111147738|emb|CAJ59397.1| high-affinity branched-chain amino acid transport protein (ABC
           superfamily, membrane) [Frankia alni ACN14a]
          Length = 491

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 85/342 (24%), Positives = 142/342 (41%), Gaps = 31/342 (9%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++  +  L + +      S     SM   I IY + A GL++VVG  GLL L  +  +AI
Sbjct: 152 IVLNLVLLAVAILAPLVVSTAAQQSMVNDIGIYALLALGLNVVVGYAGLLDLGYIAFFAI 211

Query: 77  GAYSYVILGSRYGLSI--------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           GAY+     S+  +          + + P++ +++   G+I+G P+L+ RGDYLAI TL 
Sbjct: 212 GAYATAYFTSQTAMPWHAPFVLNPFFVFPIALVLAALAGVILGAPTLRLRGDYLAIVTLG 271

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
             EI   +      ITNG  G +    L          I        + I  +  YY+LL
Sbjct: 272 FGEIIHLVANNADGITNGARGAFGVPHLS---------IDLLGIDYKWGIDPLPYYYLLL 322

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +          L R+ I  +W  IR+++ A  +     +  KL AFA+ ++  G AG  
Sbjct: 323 AIVIGVMIAFGRLERSRIGRSWAAIREDEIAAEATGVATLRMKLLAFAIGASVSGFAGVL 382

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           FA+ +   +P  F    +  V+++VI GGM S   +     +L G+              
Sbjct: 383 FASKQFF-NPQSFSLQASFFVVAVVIFGGMGSRLGVVVGAVVLQGLAFYLR--------- 432

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
               D              + ++++ R   L+  R     +E
Sbjct: 433 ----DKVQPADRYIYFGAVIVIMMIFRPQGLVPSRRRRREIE 470


>gi|313673780|ref|YP_004051891.1| inner-membrane translocator [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940536|gb|ADR19728.1| inner-membrane translocator [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 350

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 83/322 (25%), Positives = 144/322 (44%), Gaps = 15/322 (4%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           VY  L+ +FL    +  YI  +   I I  + A GL+I+ G  GL+SL       +GA++
Sbjct: 29  VYSFLILMFLVPFHANSYILYILNMIFISSIAAVGLNILTGFTGLISLGHGAFIGVGAFA 88

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
              L   YG++ +  IP++A+ +   G+I GLPSL+ +  YL+IATL    I + I I+ 
Sbjct: 89  TGYLAMNYGMNFYFAIPLAALFTAIIGIIFGLPSLRLKDLYLSIATLAAQFILEFIFIRA 148

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           +  T G  G+ VA    F                         Y+       +  ++   
Sbjct: 149 ESFTGGVNGMPVASPTIFGIEINNDFR---------------FYFFAYSFAIIMITVAKN 193

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           + RT I  A+ ++RDN  A  ++   +   KL +F +SS + G+AG+ +A     I+P+ 
Sbjct: 194 ILRTRIGRAFISVRDNYIAAEAMGVDVFKYKLLSFGISSFYAGIAGSLWAYYVQFITPEH 253

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F  + +I  +S++I+GG+ SL      T  ++ + E+   +      +       F    
Sbjct: 254 FTITVSIQYLSMIIIGGLGSLLGSIFGTIFIVILPEILRHIVDLLSGAAPFLKQIFPAIR 313

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
                + + L +L     L R 
Sbjct: 314 EAFYGLVIILFLLFEPEGLARR 335


>gi|159899523|ref|YP_001545770.1| inner-membrane translocator [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892562|gb|ABX05642.1| inner-membrane translocator [Herpetosiphon aurantiacus ATCC 23779]
          Length = 583

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 92/364 (25%), Positives = 155/364 (42%), Gaps = 28/364 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + LLAV+   ++ + L        +    I I I+++ A GL+IVVG  GLL L     +
Sbjct: 197 IPLLAVIALPVILIPLIDRAGNLLLLDALIPIYIFILLALGLNIVVGYAGLLDLGYAAFF 256

Query: 75  AIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           AIGAY+  +L S +    +S WL+I V+A ++   G+ +G P+L  RGDYLAI TL   E
Sbjct: 257 AIGAYTTAMLSSPHLGINISFWLVIWVAAAVAAIAGLALGAPTLPLRGDYLAIVTLGFGE 316

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVR-----------SLIRFFRFPSSFVIYE 180
           I   +                   L      +            S        +     +
Sbjct: 317 IVPILFRNLGGGPPTGTLTLRFFGLPIGIEQMDLTGGNKGINPISPPNLPLIGNFEPSNK 376

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           I  YY+L+ +  L+   I  LR +    AW  +R+++ A  ++   ++  KL AF++ + 
Sbjct: 377 IPWYYLLIIIMGLAIFFINRLRDSRQGRAWMAMREDELAADAMGINVVRTKLLAFSMGAM 436

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC-- 298
           F G  GAF+ A    I P  F FS +II++ +VILGG+ +++ +     ++ G  ++   
Sbjct: 437 FSGFGGAFYGAFIGAIFPSSFDFSVSIILLCMVILGGLGNMAGVIVGGLLIQGADKMFIP 496

Query: 299 ------------CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                         +        +        +   L  I L +++L+R   LL      
Sbjct: 497 KGAELFRDIADQRALTTGGSTVGVSALQDLTQQRLLLFGIVLVVMMLIRPEGLLPNERRK 556

Query: 347 NFLE 350
             L 
Sbjct: 557 AELH 560


>gi|119714483|ref|YP_921448.1| ABC transporter related [Nocardioides sp. JS614]
 gi|119535144|gb|ABL79761.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
           / amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Nocardioides sp. JS614]
          Length = 565

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 114/309 (36%), Gaps = 22/309 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +  +Q ++    A  ++++VG  G +S+       +G Y+   L +         +  
Sbjct: 2   WLNYLVQAVLLASLALSVNLLVGYAGQVSVAHAAFAGVGGYTIAYLTTARDWPFVTALVA 61

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I+ A G+++GL +L    ++L + TL  S     I   +  +  G  GI     L  
Sbjct: 62  ATLIAAAVGVVIGLIALGLAEEFLILMTLAFSLAVIGIFATFDAL-GGVMGITNVTGLSI 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           LG  +     +                  LG   ++ ++   +  +      + IR++  
Sbjct: 121 LGHEMTGPRDW--------------LVPALGTLVVTFAVCWRIGESPYGRVLKGIREDSD 166

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL       K+  FA+++   G  G  ++      +P  F F   + V ++VI+GG 
Sbjct: 167 ATRSLGKNTFAYKVGIFAITAGMAGWVGGLYSGWLGLATPSAFGFPLAMSVFAMVIVGGS 226

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L     A  +L  +             +L        +    L    L +++++R   
Sbjct: 227 ANLFGSVLAAGVLTLIEPTLR-------EALAMQSSQAALVQIVLYGALLVVMMILRPQG 279

Query: 339 LLRLRTPSN 347
           LL  R    
Sbjct: 280 LLAERFRHV 288


>gi|110679439|ref|YP_682446.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
 gi|109455555|gb|ABG31760.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
          Length = 669

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 103/312 (33%), Gaps = 26/312 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLI 96
                   IY + A GL+I  G +G++++       +GAY+  ++          I L I
Sbjct: 380 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQLFIPDYTLSILLAI 439

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++ M++   G+ M    +++   +  + TL+ +      L +      G     +    
Sbjct: 440 PLAFMVTFGAGVAMERLVIRW-LYHRPLETLLATFGVSIALQQLAKNIFGTQARPLTAP- 497

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     +      +  V        +        A  +  ++RT +    R +  N
Sbjct: 498 --------GWLDGSWVINDIVSISYIRIAIFFLALMFLALFLFVMKRTRLGLEVRAVTQN 549

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +   S+        +  F   S   G+AG          S    ++         V++G
Sbjct: 550 PRMAASMGINPDRINMLTFGFGSGIAGIAGVAIGLYSKVTSEMGSEYIVQS--FMTVVVG 607

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++        ++  + +    +N            S  +   T M++ + L I  R 
Sbjct: 608 GVGNIWGTLLGATMVGTLQKGIEWLNP-----------SNTLAAQTYMILFIILFIQFRP 656

Query: 337 HSLLRLRTPSNF 348
             ++ L+  +  
Sbjct: 657 RGIIALKGRAAE 668


>gi|309790179|ref|ZP_07684751.1| inner-membrane translocator [Oscillochloris trichoides DG6]
 gi|308227764|gb|EFO81420.1| inner-membrane translocator [Oscillochloris trichoides DG6]
          Length = 361

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 80/329 (24%), Positives = 140/329 (42%), Gaps = 1/329 (0%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
                +   +  ++  + L      +Y  ++   I I  + A GL+I+VG  G +S+   
Sbjct: 17  RPYWPMRIRIILIIAIMLLFPWFGNRYWLNLVNTIGIAAIGAIGLNILVGFTGQISIGHA 76

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
              A+GAY+  +L +  GL +W+ IP++ +++   G + G+PS++ +G YLAIATL   E
Sbjct: 77  GFMAVGAYTTGLLAAHAGLPMWISIPIACIVAAGVGALFGMPSVRLKGLYLAIATLAAQE 136

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I    L K   I     G   A       +   +    F         +   Y+V++   
Sbjct: 137 IIIWFLTKGDKIVQMATGDRRAVFFGESLSIPPAANNVFGIALKGNN-DFNFYWVIITCL 195

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+      L R+    A   IRD   A   +   +   KL AFA SS   G+AGA  A 
Sbjct: 196 VLTVLFASNLFRSRAGRAMVAIRDQDIAAQVIGVDLFKYKLLAFATSSFIAGLAGALMAH 255

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            R  IS + F    +I+ +S++I+GG+ S+S      A +  +  L   ++      +  
Sbjct: 256 YRGIISWERFTIDISILYLSMIIIGGLGSVSGSIYGAAFMTILPALLSNISRAASGVMPA 315

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           F             +A+ L ++     ++
Sbjct: 316 FANYLPYIQQGAFGLAIILFLIFEPEGIV 344


>gi|256829191|ref|YP_003157919.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
 gi|256578367|gb|ACU89503.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
          Length = 332

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 70/323 (21%), Positives = 127/323 (39%), Gaps = 29/323 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L V    +  +     +   Y   +   I I  +   GL++ +G  G +SL     + +G
Sbjct: 18  LFVSLMAMALILFPYIEDNPYTLGLTNLIAINAIVVLGLNLFIGYAGQISLGHAAFFGLG 77

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   I    +GL  W  + + A + G   + +G+P L+  G YLA+ATL ++ +   +L
Sbjct: 78  AYGSAIATVTFGLPPWPAMFLIAALVGLVSLAVGIPVLRLSGHYLAMATLGLNYVVHTVL 137

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++W  +T G +G      L                        + ++Y+L G       +
Sbjct: 138 LQWDEVTGGPSGFAGIPSLSVADVVFDD--------------PVSLHYLLWGFTMACLLL 183

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L L R+ +      +  ++ A  SL      AK+  F +S+    +AG+ FA     +S
Sbjct: 184 CLNLVRSGVGRGLAALAGDETAAASLGVDTRAAKVKVFVLSAVLASLAGSLFAHCYSYVS 243

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           PD F    +  ++ +V++GGM S+       A L  + E     + Y             
Sbjct: 244 PDTFGIFTSTDLVIMVVVGGMGSIWGSVFGAAFLTLLPEWMEVFDTY------------- 290

Query: 318 MRHTTLMVIALFLVILMRSHSLL 340
                +    L LV++     L+
Sbjct: 291 --KDFVHGGILVLVLMFLPQGLI 311


>gi|291301244|ref|YP_003512522.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728]
 gi|290570464|gb|ADD43429.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728]
          Length = 372

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 78/365 (21%), Positives = 152/365 (41%), Gaps = 51/365 (13%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSM-----------------GIQILIY 49
           R  +        A +  +L+  +     ++ Y+  +                  +   I+
Sbjct: 23  RRWRSLSWYWRAAAIVAVLVLFYSLPILNEYYVFPINYLSTDAVSGGTAFDDALVLTSIW 82

Query: 50  VMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG-----LSIWLLIPVSAMISG 104
           V+ A GL++V+G  GLL L  +  +A+GAY+  I GS             L+P+   ++ 
Sbjct: 83  VLVAVGLNVVIGMAGLLDLGYIGFFAVGAYTVAIFGSPTSEVATAYPWLALVPIGIALAM 142

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
             G+I+G+P+L+ RGDYLAI T+   EI + + +    +TNG+ GI    +         
Sbjct: 143 VSGVILGIPTLRLRGDYLAIVTMGFGEIIRIVAVN-TDVTNGQQGIQNIPKPP------- 194

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
                       V+    MY++ L +  +    +  L  + +  AW  +R+++ A   + 
Sbjct: 195 ------GSLFENVLDSRPMYWLCLTIVVICIFGVARLENSRVGRAWLAVREDEDAAGIMG 248

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                 K+ AFA+ +A  G++G  +A+    I+ D F    +I+ +++V+LGG  + + +
Sbjct: 249 VPAFKFKIWAFAIGAAVGGLSGVLYASKEGVINSDSFPLQTSILFVAMVVLGGQGNTAGV 308

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                ++  + E    +                     L  +AL +V++ R   +L    
Sbjct: 309 ILGAIVVAYLPERLRFVAD---------------WREVLFGVALVVVMIFRPQGILPSSR 353

Query: 345 PSNFL 349
            S  L
Sbjct: 354 RSAEL 358


>gi|218781782|ref|YP_002433100.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218763166|gb|ACL05632.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 354

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 69/344 (20%), Positives = 138/344 (40%), Gaps = 32/344 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   + +   +       Y   +   + +Y + A  L++++G  G+  +     YAIGA
Sbjct: 12  IIYAVVAVVWIVSPLFLDNYQTDVLNTVGLYAILALSLNVILGYGGMFHMGHAAFYAIGA 71

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL +++G+     +P++ +++G   +I+  P +  RGDYL I T+ M EI +  +I
Sbjct: 72  YTTAILSTQFGVPTMWTMPIAGILAGVFALIVARPIIHLRGDYLLIVTIGMVEIVRIAII 131

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSL-----------------IRFFRFPSSFVIYEI 181
                +  K        L      +                       F F  + ++   
Sbjct: 132 NDAVSSAAKFLNKGFMLLGIQDWALCEKIANASTGGPNGIFGVAAPSIFGFEINGIVNTT 191

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             ++++      +  +   L R+    A R +  ++ A           KLSAF + + +
Sbjct: 192 HYFFLITAFLAATILLFFLLERSRYGRALRYLCSDEIAAEGSGVNTSGYKLSAFVIGAFW 251

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            GMAG  FA     ISP  F F+E++ +  IVILGG   +  +     +++G+ E+    
Sbjct: 252 AGMAGTLFAGKITFISPTSFTFAESVTLFMIVILGGSGYIPGVILGALLVVGLPEIFQ-- 309

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                         F      +  I L +++++R   ++  + P
Sbjct: 310 -------------DFQKWRMLVFGIVLVIMMVLRPQGIMPPKPP 340


>gi|134101412|ref|YP_001107073.1| ABC transporter permease protein [Saccharopolyspora erythraea NRRL
           2338]
 gi|133914035|emb|CAM04148.1| ABC transporter permease protein [Saccharopolyspora erythraea NRRL
           2338]
          Length = 342

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 67/325 (20%), Positives = 134/325 (41%), Gaps = 29/325 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +AV   ++  LF G   +  Y   + +   IYV+ A  L++V+G  GLLSL     + +G
Sbjct: 9   VAVSVAVVGLLFAGGMLAGPYQTQIAVLAAIYVIMASSLNLVLGYSGLLSLGHQAYFGLG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   I  +  G+ + L + VSA+++     ++G  +L+ R  +  IAT  ++EIF+ + 
Sbjct: 69  AYVSAIASTALGVPMVLAVVVSAVVALVVAWLIGRVTLRLRAAFFVIATFAVAEIFRQVA 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + W  +T G  G      +   G                ++    ++ V+  +       
Sbjct: 129 LNWVELTGGPMGYSEIPPIGMFGYE--------------LVRPKEVFPVVFAVALFIVIA 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           I  L  + +  + R + +N+    ++          AF++S A   +AG+ +A +   +S
Sbjct: 175 IARLASSGLGYSMRGLAENENLARAVGIDTSRNATIAFSLSGAMAAVAGSLYAHTVGFVS 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P++F F+  I  + +VI GGM ++        +   + E+    +               
Sbjct: 235 PEVFGFAIMINTLLMVIAGGMGTVLGPVIGAVLFTQLPEMLRFSDE-------------- 280

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                +  + L L++      L   
Sbjct: 281 -WRLVIYGLVLVLLVRFMPRGLWGT 304


>gi|298292601|ref|YP_003694540.1| inner-membrane translocator [Starkeya novella DSM 506]
 gi|296929112|gb|ADH89921.1| inner-membrane translocator [Starkeya novella DSM 506]
          Length = 391

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 71/327 (21%), Positives = 141/327 (43%), Gaps = 19/327 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  ++   ++  F    +   Y   + +  ++Y + A  L+  +GS  + +     +Y I
Sbjct: 78  LALLLGIAIVLAFPFVLEGNTYALHLCVISMLYAVLALALNFQLGSANIPNFATGASYGI 137

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +L   +G+S WL +PV+A+++   G ++G+PS++ R  YLA+ T+    +   +
Sbjct: 138 GAYASALLALNFGISFWLALPVAAVVATIFGFLLGIPSMRTRDSYLALVTIAFGVVIHQL 197

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           L   +  T G  G+         G +  S +  F      +  +   YY+   +  +S  
Sbjct: 198 LNNLE-FTGGPNGLVGIPAPELFGHSFASPLVIFGQE---LPSQANFYYLSALLVLISIV 253

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               L  + +  AW  +R ++ A       + + K+ AFAV +   G AG  +A     I
Sbjct: 254 FARRLHDSRVGLAWNALRTDELAARCQGINVTWYKVLAFAVDAFLAGFAGTIYAFYVGFI 313

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SPD F F  ++ ++++VI GGM ++  +     +L  + E     + Y            
Sbjct: 314 SPDNFTFLVSVTIMTMVIAGGMDNILGVIVGAFLLTLLPEKLRAFSDY------------ 361

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLR 343
                    + + + +++R   L   R
Sbjct: 362 ---RILFFGVTVIVFLMIRPQGLFPQR 385


>gi|116748281|ref|YP_844968.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
 gi|116697345|gb|ABK16533.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
          Length = 318

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 79/322 (24%), Positives = 141/322 (43%), Gaps = 30/322 (9%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
            +           Y   +   + IY +    L+++VG  GL +L     YA+GAY+  IL
Sbjct: 12  AVLFACLPLFLNAYWIDVLNSVGIYAILGLSLNLIVGHTGLFNLGHAAFYAVGAYTAAIL 71

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK-WKPI 143
            +++ + + LLIPV    +G   +++  P +  RGDYL I T+ + EI +  LI     I
Sbjct: 72  NTKFQVPVLLLIPVCGFAAGLFALVVSKPIIHLRGDYLCIVTIGVGEIVRIALINDVFGI 131

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
           T G  GI+   R    G  +R+               +  +Y++     ++  +   L R
Sbjct: 132 TGGSNGIFGISRPSLFGFVIRT--------------PLEFFYLIWAFAAITVLLFHLLER 177

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           +    A   +R+++ A           KL++F + +A+ GM G  FAA    ISPD F F
Sbjct: 178 SRFGRALNYLREDEVAAEGSGINTAHYKLASFVIGAAWAGMTGNLFAAKMTIISPDSFTF 237

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            E++++ +IVILGG  S+  +     +++G+ E+                         +
Sbjct: 238 WESVVMFAIVILGGSGSIPGVLVGAFLIVGLPEVFREF---------------ANARMLV 282

Query: 324 MVIALFLVILMRSHSLLRLRTP 345
              A+ ++++ R+  LL  R  
Sbjct: 283 FGAAMMVMMVFRTQGLLPARPR 304


>gi|212716440|ref|ZP_03324568.1| hypothetical protein BIFCAT_01364 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660693|gb|EEB21268.1| hypothetical protein BIFCAT_01364 [Bifidobacterium catenulatum DSM
           16992]
          Length = 386

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 79/341 (23%), Positives = 140/341 (41%), Gaps = 42/341 (12%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  VV   +L     +  +  YI  + + I I ++    L++ +G LG L+L C    A
Sbjct: 16  AIGVVVLFGILMGVCESGMASAYIKGIMMTICIAIIMTTSLNLTIGVLGQLTLGCCGFEA 75

Query: 76  IGAYSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           IGAYS  +         +     L   L   V  +I+   G+++G+P+L+  GDYLAI T
Sbjct: 76  IGAYSAALLSKLLVANGVAMDPTLRFLLTTLVGGVIACIFGILVGIPALRLHGDYLAIIT 135

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + I+   K                        L +     +   I  +   YV
Sbjct: 136 LGFGEIIRVIIQNLKVAGG------------------MGLDKGAAGQALIGIDRLANLYV 177

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  ++  ++    R+    A + IRD++ A  +    I + K+  FA+S+ F G+AG
Sbjct: 178 VFWITVVTVVLLFMFARSRYGRAVKAIRDDEIAASASGINITYMKVLVFAISAFFAGIAG 237

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             FA     ++P M  + ++I  + +V+ GGM SL+    +   L  + EL    + Y  
Sbjct: 238 GIFAQYIGSLNPSMAGWLQSINYVIMVVFGGMGSLTGSIVSAIGLTILPELLRAFSTY-- 295

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                           +  +AL L+++ R   +      S 
Sbjct: 296 -------------RMLVYSVALVLIMIFRPQGIFGNWEFSL 323


>gi|294499667|ref|YP_003563367.1| putative branched-chain amino acid ABC transporter permease
           [Bacillus megaterium QM B1551]
 gi|294349604|gb|ADE69933.1| putative branched-chain amino acid ABC transporter, permease
           protein [Bacillus megaterium QM B1551]
          Length = 399

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 89/352 (25%), Positives = 151/352 (42%), Gaps = 31/352 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  V+  +LL        + +    +   + IY+  A GL+IVVG  GLL L  V  +
Sbjct: 31  WLIAGVILIVLLPFSASQGPAYESYMEVSTLVGIYIAMALGLNIVVGLAGLLDLGFVAFF 90

Query: 75  AIGAYSYVILGSRYGLSI-------------WLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           A+GAY+Y I  +    +              W  I    +I+   G+++G+P L+ +GDY
Sbjct: 91  AVGAYTYGIFATNQAANFMPFGTYPLSGESFWFFIIAGCLIAALFGVLLGIPVLRVKGDY 150

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LAI TL   EI + +        N   G               S +         ++Y  
Sbjct: 151 LAIVTLGFGEIIRIVFNNLDKPINITNG-----------AMGLSSVTPPSIFGINLVYPS 199

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             YYV+L +      I+     + +  +W+ +R+N+ A  ++   ++  KL AFA+ ++F
Sbjct: 200 QFYYVVLVILGAVIFIVRRFEYSKVGRSWKAVRENEIAAQAMGIHLVRTKLLAFAIGASF 259

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI-----GVVE 296
            GM G  FAA +  + P  F   E+I ++ +VILGGM S+  +    A++       + E
Sbjct: 260 SGMMGVVFAAKQTFVDPTSFTLLESITILVMVILGGMGSVPGVILGAAVVTILNLQVLTE 319

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHT--TLMVIALFLVILMRSHSLLRLRTPS 346
           L    N    N ++    + +       +    L L  L RS  LL  + P+
Sbjct: 320 LTDWFNQLSLNGVISIPDALSPAKMQRFIFGGLLILFALYRSQGLLPAKQPT 371


>gi|302387309|ref|YP_003823131.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
 gi|302197937|gb|ADL05508.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
          Length = 367

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 61/341 (17%), Positives = 117/341 (34%), Gaps = 4/341 (1%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           ++K      +  +V   LL      +    Y  S+  +  IY + A  ++++ G  GL S
Sbjct: 6   VSKNKLYTLIALLVIIGLLAFLQANSSLYSYQISILERSAIYAVVAVSMNLLTGFTGLFS 65

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      AIGAY+  IL           +     I+ A   +     L      L  A +
Sbjct: 66  LGQAGFMAIGAYTVAILTIPVDSR--ASVYYVGGIAPAIANLHCPYWLALILAGLLAAAM 123

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                   + +K   +     G     R       + ++           I      +V 
Sbjct: 124 AALIGIPVLRLKSDYLAIATLGFSEIIRAVIAAPQLDTITN--GSYGLKSIPGFPNLFVA 181

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
            G+C L   +++ L  ++   A++ +R+++ A  ++   +   K  AF +SS F G+ G 
Sbjct: 182 FGLCALCILLMILLINSSYGRAFKALREDEVAAQAMGLNLFRYKELAFVISSFFTGVGGG 241

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     I    F  +    ++ IV+LGG+ S++       ++    E     +     
Sbjct: 242 LLAIFMRSIDSKTFSINLTYDILLIVVLGGIGSITGSVIGAFLVTAGREWLRFFDNPLVI 301

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
              +           +  I L  V+L     ++     S  
Sbjct: 302 GGFEVPLFRTGFRMVIFSILLMAVVLFYRRGIMGSNEFSWE 342


>gi|303248570|ref|ZP_07334826.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
 gi|302490011|gb|EFL49933.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
          Length = 323

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 77/325 (23%), Positives = 126/325 (38%), Gaps = 29/325 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++     L+L L +       Y  S+ I   +  + A GL++++G  G +SL     Y I
Sbjct: 10  IVQAGLFLVLLLAVPYLLPNDYYLSICILGCLSAIIAVGLNLLMGYAGQISLGHAAFYGI 69

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY   I  +R+GL I + +     ++     +M  P LK +G YLA+ATL    I   +
Sbjct: 70  GAYVTAICTTRFGLPIPVGMAAGVALAMVVAWVMAAPILKLKGHYLAMATLGFGIIVAIV 129

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
             +   +T G +G     RL  LG    S                  Y ++  +  L   
Sbjct: 130 FNEAVDLTGGPSGYVGIPRLSLLGFDFDSDR--------------SYYNLVAVVLSLVVL 175

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           + L L R+    A R +  ++KA  SL   I   K   F +S+   G+AG  +A     I
Sbjct: 176 VSLNLMRSRTGRALRALHVSEKAAASLGVDIAAHKRFVFVLSAGLAGLAGVLYAHYLSFI 235

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +P  F F  ++ ++ +V+LGGM ++         L  + E                    
Sbjct: 236 APASFGFGVSVQLVVMVVLGGMANVWGSVVGALFLTALPEALREFED------------- 282

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 +    L L I+     L  
Sbjct: 283 --IDILVYGAILVLTIMYLPDGLTG 305


>gi|23664431|gb|AAN39368.1| ABC-transporter [Azoarcus evansii]
          Length = 572

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 65/322 (20%), Positives = 129/322 (40%), Gaps = 26/322 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             ++  +         +   M  ++LI  +FA  L ++VG  GL+S      + I AY+ 
Sbjct: 11  LAVMAGVLAFPAFGSDFYAEMVAKVLILAIFAMSLDLLVGFTGLVSFGHAAYFGIAAYAV 70

Query: 82  VILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
            ++  +Y   ++WL +P S + + A   ++GL  L+ +G Y  + TL  +++   +    
Sbjct: 71  ALMTPKYDPANLWLALPASILAAAAAAFVIGLFVLRTKGIYFIMVTLAFAQMAYYVFHD- 129

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
            P+  G  GI             +       +    +     +YY ++        ++  
Sbjct: 130 TPLGGGSDGI---------YLNFKPDATIAGWVPFDLNEPHHLYYFVVAAMLAVYGLLKL 180

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           + R+        IR N+    SL       KL+AF ++    G AG  +A     ++P+ 
Sbjct: 181 VLRSPFGRVLVGIRSNEHRMLSLGYATFRYKLAAFTLAGGLAGFAGFLYAVLFGFVTPEY 240

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
             + ++  V+ +VILGGM +L+      A L+G+ E+  GM  ++               
Sbjct: 241 LSWHKSGDVLLMVILGGMGNLAGAIAGAAALVGLQEIFTGMTKHW--------------- 285

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
             LM + +   +L     +   
Sbjct: 286 QLLMGLTIVAAVLFMPGGMAAT 307


>gi|332284983|ref|YP_004416894.1| putative branched-chain amino acid transport system protein
           [Pusillimonas sp. T7-7]
 gi|330428936|gb|AEC20270.1| putative branched-chain amino acid transport system protein
           [Pusillimonas sp. T7-7]
          Length = 617

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 48/307 (15%), Positives = 111/307 (36%), Gaps = 22/307 (7%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
           + ++  +    I +  +   GL ++ G  G+ S        IGAY+  +L +  G S W+
Sbjct: 22  TPEFWITHLNYIGLSSLVVLGLILLTGIGGMTSFGQAAFVGIGAYTTAVLTTDAGWSPWV 81

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
            + +  +I+     I+G  +L+  G YL + T+  S     +      +     GI    
Sbjct: 82  TLFIGLLITFVVAYILGAITLRLSGHYLPLGTIAWSLSLYYLFGNLGFL-GQYDGIAGIA 140

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
            +   G ++ +                 +YY++     LS      L  +    A R ++
Sbjct: 141 PIDIFGFSLGNGRH--------------IYYLIWVFVLLSMWATRNLLDSRPGRAIRALK 186

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
                  S    +   K+  F  ++    ++G  +A  +  +SP  F  + +I  + + +
Sbjct: 187 SGGGMAESFGIHMAGYKVIVFVYAALLASVSGWLYAHMQRAVSPSPFGLNYSIEYLFMAV 246

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +GG  S+        +++ + +    +     ++   F          +  + + LV+  
Sbjct: 247 VGGAGSVWGAVAGAGLILTLKDQLQNVLPKILDTTSNF-------ELIVFGVLMILVLQY 299

Query: 335 RSHSLLR 341
               +  
Sbjct: 300 ARDGVWP 306


>gi|90423452|ref|YP_531822.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90105466|gb|ABD87503.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 411

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 64/346 (18%), Positives = 129/346 (37%), Gaps = 15/346 (4%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           +K+  I  L+     + L   +       Y   +  +  IY +FA G +I+ G  G LS 
Sbjct: 5   SKFADIALLIGFAIVVALGPVIFTPIGAGY-PDLLQKFAIYGVFAIGFNILFGLTGYLSF 63

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                  +G+Y+ V       + +   +  S +++G   + +G  SL+  G Y +I TL 
Sbjct: 64  GHAAFLGVGSYAAVWSFKLVSMDLLPAVAFSVVLAGVLALAIGFISLRRSGIYFSILTLA 123

Query: 129 MSEIFQNILIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +++  N+      PITNG+ G+ V  +       +   +          I     +Y+ 
Sbjct: 124 FAQMCYNMAYSVLTPITNGETGLRVLRQDPRHLDAMFGYVSPTPSLLGLPITGWTGFYIC 183

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +   +  + + + R+      R I+ NQ              LSAF +S  F G+AG+
Sbjct: 184 GAVLVAAFGLSIAIFRSPFGMTLRAIKSNQNRMGYTGYHTRPYLLSAFVISGMFAGLAGS 243

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             AA+   +  +  +++ +  V+ + ILGG  +L      T ++     +    N     
Sbjct: 244 LLAATDPLVGAERMQWTASGEVVLMTILGGAGTLLGPVLGTGLIKYFENIFSAYNEPQLT 303

Query: 308 SLLKF-------------DCSFNMRHTTLMVIALFLVILMRSHSLL 340
           ++  F                        + +    V++     ++
Sbjct: 304 AVFAFLPDGVRELVVKTAGLFVGEGWQLTLGLLFMAVVIFLPGGIM 349


>gi|91976837|ref|YP_569496.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91683293|gb|ABE39595.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 325

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 69/340 (20%), Positives = 131/340 (38%), Gaps = 29/340 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             I   L++   +L+   L +    +Y   +     I  +   GL+   G  GL+SL   
Sbjct: 1   MAIRNALSIAAAILVIGGLLSAVLPEYYLRLLNLSAISAVAVIGLNFAFGYAGLISLGHA 60

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               +GAY   IL    G S WL  P +   +     ++G P L+ RG YLA+ATL ++ 
Sbjct: 61  AFVGMGAYGLAILTVTSGWSPWLAAPAAIAATAVLAALIGYPLLRLRGHYLALATLGLNV 120

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            F  +   W  +T G  GI     L     TV    RF               ++ L + 
Sbjct: 121 SFYIVTSNWIDLTGGTNGIARIPELTIGTLTVAGEHRF--------------LWLALVVL 166

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            + A++   L  +        +RD++ A   +       K++AF +S+    +AG  FA 
Sbjct: 167 AIVAALAAILHGSRHGREMMAVRDDEIASEMIGIDTTRVKITAFVLSAVCAAIAGCLFAL 226

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               ++P+ F ++ +I  ++++I+GG +++        +L  + E    +          
Sbjct: 227 HVRFVAPEDFTYAHSITYLAMLIVGGESTIVGAILGAILLTFLPEWLRFL---------- 276

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                   +     + +  +++     L+ L        +
Sbjct: 277 -----GTAYLFFFGLLMLCILVFLPTGLVGLGQRLRRSRK 311


>gi|313902801|ref|ZP_07836198.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Thermaerobacter subterraneus DSM 13965]
 gi|313466921|gb|EFR62438.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Thermaerobacter subterraneus DSM 13965]
          Length = 362

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 74/345 (21%), Positives = 138/345 (40%), Gaps = 23/345 (6%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLF---LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            LR   +  ++    +   +++    L L      +Y+  +  Q  IYV+ A  L++++G
Sbjct: 12  PLRATPWPVVIGRWLLQLAVIVGIYELLLAWVGGNRYLLVVLTQAGIYVILAVSLNLILG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G LS+      A+G Y+  IL   + +     +   A+ +GA G+++G+PSL+ RGDY
Sbjct: 72  YTGQLSIGHAGFMAVGGYAAAILTKFFSVPFPAALLAGAVAAGAAGLLVGIPSLRLRGDY 131

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LAIATL   EI   +L     +  G                   +I          I   
Sbjct: 132 LAIATLGFGEIISVLLSLINEVPVG-----------------DRVIDVGGAQGLIGIPRH 174

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +     +  L+  ++     +    A   IR+++ A  ++       K+ AF +S+  
Sbjct: 175 TTFAWTYLVAVLAIKVVWHFVHSTHGRACIAIREDEVAAEAMGIPSTRYKVLAFTISAML 234

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AG  +A     ++P +  F  ++ ++ IV++GGM S +    A        +     
Sbjct: 235 AGVAGGLYAHQYLYLNPAVAGFMNSVFILVIVVIGGMGSTTGAVAAAVFFTYTNQAL--- 291

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
             +     L            L  + L +V+L+R   LL     +
Sbjct: 292 PNWMQALHLPPSIDPPAVRMVLFSVLLIVVMLVRPRGLLGGVELT 336


>gi|330836092|ref|YP_004410733.1| inner-membrane translocator [Spirochaeta coccoides DSM 17374]
 gi|329747995|gb|AEC01351.1| inner-membrane translocator [Spirochaeta coccoides DSM 17374]
          Length = 333

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 73/335 (21%), Positives = 145/335 (43%), Gaps = 29/335 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R + +        ++  ++  +      + +Y+  + I  L+Y M A  L+++ G LG +
Sbjct: 4   RFSTWLVRHKSPLLIGTVIAAVIFPYVFTSRYVLRIAILCLMYCMLAVSLNLMSGILGQI 63

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S      + IGAY+  IL   +G +   ++ V+A+++G  G+++ LP +  +G Y  I T
Sbjct: 64  SFGHAAFWGIGAYTAAILAKNHGWNNVGVLIVAALVAGLFGLLLSLPVMHLKGYYFTITT 123

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           ++  +I + I I W  +TNG  GI    +L   G  ++S                  YY+
Sbjct: 124 MVFCQIVRVIEINWMSLTNGPLGIMAIPKLQIFGQLIKSQQ--------------AYYYL 169

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +  L+  I+  +    +  A   +RD+  A  ++   +   K+ A  +SS   G AG
Sbjct: 170 ILILLSLTTFIVHKVIHARMGYAILAVRDDDLAAGAMGIHVFKYKVLAIVISSMLAGAAG 229

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
            F++     I P  F  + +  ++ +VI GG+ ++        +L  + E+  G + Y  
Sbjct: 230 GFYSVYTSYIDPGSFTNAVSNNMLVMVIFGGLGNIFGSFVGATLLTVLPEVLRGFSEY-- 287

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                           +    L L++L+R   +  
Sbjct: 288 -------------RQLVFGALLVLLMLVRPEGIFG 309


>gi|239627688|ref|ZP_04670719.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239517834|gb|EEQ57700.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 371

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 62/341 (18%), Positives = 120/341 (35%), Gaps = 4/341 (1%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +  NK      +   V   +L      T    Y  S+  +  IY + A  ++++ G  GL
Sbjct: 4   MTKNKNKVYTIIALAVLIGILAFLQSDTAEYSYQISILERSAIYAVVAVSMNLLTGFTGL 63

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
            SL      AIGAY   I     G      +   + IS     +     +      LA A
Sbjct: 64  FSLGQAGFMAIGAYVVAIFTIPVGSR--ASVYYVSGISPVIANVALPIPVALLLGGLAAA 121

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            L        + +K   +     G     R +       ++           I      +
Sbjct: 122 VLAALIGIPVLRLKSDYLAIATLGFSEIIRAFIAAPMFDTVTN--GSYGLKSIPGFPNIF 179

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            + G+  L  ++++ L  ++    ++ IR+++ A  S+   +   K  +F +SS F G+ 
Sbjct: 180 AVFGLAALCIALMVLLINSSYGRVFKAIREDEIAAQSMGLNLFRYKELSFVISSFFTGVG 239

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G   A     I    F+ +    ++ IV+LGG+ S++       ++    EL    +   
Sbjct: 240 GGMLAMFMRSIDSKTFQVALTYDLLLIVVLGGIGSVTGSVLGAFLVTSGRELLRFFDDPL 299

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
             + +      +     +  I L +V+L     ++     S
Sbjct: 300 TIAGVHIPLFRSGFRMVIFSILLMVVVLFYRRGIMGNNEFS 340


>gi|308233571|ref|ZP_07664308.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Atopobium vaginae DSM 15829]
 gi|328943976|ref|ZP_08241441.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Atopobium vaginae DSM
           15829]
 gi|327491945|gb|EGF23719.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Atopobium vaginae DSM
           15829]
          Length = 378

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 68/332 (20%), Positives = 124/332 (37%), Gaps = 19/332 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           LL V+   L    + +    +Y  S+  QI IY++ A  L++V G LG L L      ++
Sbjct: 41  LLIVIVIALGQFLISSAFISRYQISVLEQIGIYIIMAVSLNLVTGYLGQLPLGHAGFMSV 100

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G Y+  I   +   ++ L      ++S        +         LA A   +      +
Sbjct: 101 GGYAGAIFIMKCAEALHLAPRAFVLLSPVAVA---IFIGGVVIGGLAAALCGLIIGIPAL 157

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV-LLGMCFLSA 195
            +K   +     G     R+          +              F  ++    +  ++ 
Sbjct: 158 RLKGDYLAIITLGFAEIIRVVMQNFDDTFNVTLTGGAKGLTGIPSFTNFINTSVLVVITI 217

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +I  L ++    A   IRDN+ A  +   +I   K +AF +S+ F G+AG  +A     
Sbjct: 218 FVIHTLMKSRWGRAIYAIRDNEIAAEASGISITMYKTTAFVLSAFFAGVAGVLYAGCIGV 277

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P  F F +++ ++ +V+LGGM S+     +   L  + EL  G + Y           
Sbjct: 278 LAPAKFGFMKSVEILVMVVLGGMGSMLGSILSATTLTVLPELLRGFSDY----------- 326

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                     + L LV++ R   L      S 
Sbjct: 327 ----RMIAYSVVLILVMIFRPKGLFGSYDFSL 354


>gi|298528276|ref|ZP_07015680.1| inner-membrane translocator [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511928|gb|EFI35830.1| inner-membrane translocator [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 320

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 77/322 (23%), Positives = 135/322 (41%), Gaps = 30/322 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V    + +         Y   +   I +Y + A  L+ +VG  GL  +     +A+GAY+
Sbjct: 10  VVAFTVVILACPFFLDAYWIDVINNIGLYAVLALSLNFIVGYTGLFHMGHAAFFAVGAYA 69

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK- 139
             IL + Y + I LL+PVS + +     ++  P +  RGDYL I T+ + EI +  L+  
Sbjct: 70  TGILNTSYDIPIVLLLPVSGLAAALFAYLVARPIIHLRGDYLLIVTIAIVEIVRIALVND 129

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +T G  GI+   R  F    +R+  +F              +Y +     LS  +  
Sbjct: 130 IFGLTGGSNGIFGISRPDFYFFDIRTPHQF--------------FYYIWAFLALSVLLFY 175

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L ++    A   I++++ A       +   KL+AF + + + GM G  +A+    ISP 
Sbjct: 176 NLEKSRYVRALNYIKNDEVAAEGSGVNVDHLKLTAFVLGAFWAGMVGNIYASKMTLISPA 235

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F F E++I+  IVILGG  S+  +     ++IG+ E+                      
Sbjct: 236 SFNFWESVILFVIVILGGSGSIRGVILGAFLIIGLPEIFRQFAG---------------A 280

Query: 320 HTTLMVIALFLVILMRSHSLLR 341
              +   A+  +++ R    L 
Sbjct: 281 RMLVFGGAMVAMMVFRPQGFLP 302


>gi|148654792|ref|YP_001274997.1| inner-membrane translocator [Roseiflexus sp. RS-1]
 gi|148566902|gb|ABQ89047.1| inner-membrane translocator [Roseiflexus sp. RS-1]
          Length = 352

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 80/320 (25%), Positives = 146/320 (45%), Gaps = 10/320 (3%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  +L+ + +    + +Y  ++   I I  + A GL+I+VG  G +S+      A+GAY+
Sbjct: 26  IAVVLIAVLIFPWFADRYWLNLANTIAIAAIGAIGLNILVGYTGQISIGHGGFLAVGAYT 85

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +L  R  + +W+ IPV+++ +   G   GLPS + +G YLAIATL   EI   +L   
Sbjct: 86  AGLLAVRLDMPMWITIPVASLFTALVGAFFGLPSARLKGLYLAIATLASQEIIIWLLTHG 145

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           K +  G++          L     +   F    ++    +   Y++ +G   L+A  +  
Sbjct: 146 KLLGIGES----------LSLPPATNNLFGVPLNALGNNDFVFYWITVGFLALTAVFVSN 195

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L R+    A+  IRD   A   +   I   KL AFA SS F G+AGA  A  R  IS + 
Sbjct: 196 LFRSRTGRAFVAIRDQDIAAQVIGVDIFRYKLLAFATSSFFAGLAGALTAHYRGVISWER 255

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F    +I+ ++++I+GG+ S+S      A ++ +  +   +       +   +       
Sbjct: 256 FTIDTSILYLAMIIIGGLGSVSGSIYGAAFMVLLPAMLANLARSVSGVVPDINSYLPFIQ 315

Query: 321 TTLMVIALFLVILMRSHSLL 340
                +A+ L ++     ++
Sbjct: 316 QGAFGLAIILFLIFEPEGIV 335


>gi|116749114|ref|YP_845801.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
 gi|116698178|gb|ABK17366.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
          Length = 317

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 67/319 (21%), Positives = 131/319 (41%), Gaps = 29/319 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
            + +L+   +G + S  Y   +   I I  + A GL++++G  G +SL     Y +GAY+
Sbjct: 4   AFFVLVIAVVGLSVSNAYHFQLLTFIGINTLLALGLNMLMGYAGQISLGHAAFYGLGAYA 63

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             IL      S WL +PV+ +++     ++ LP L+  G YL + TL    I   I  +W
Sbjct: 64  TAILTVHLNWSPWLALPVAVVLTVVIAFLVALPMLRLSGFYLGMGTLGFGMIGYIIFREW 123

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
              T G +G+     L     +  S                  +Y++  +  +   +   
Sbjct: 124 SRFTGGDSGLVGIPSLELGPISFASARN--------------YFYLVWAVVLVCLLLCER 169

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  + +    R I D+++A  ++       K+  F +S+ F  +AG  +A   + ISP  
Sbjct: 170 LVDSRVGRGLRAIHDSEQAAAAMGIDTSRLKIQIFVLSAVFAALAGFLYAHLVNFISPGS 229

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F F  ++ ++++V++GGM S+       ++L  + E                        
Sbjct: 230 FDFLVSVRIVTMVVIGGMASIWGSLLGASLLTVLPEFLQAFADS---------------E 274

Query: 321 TTLMVIALFLVILMRSHSL 339
             +  + L ++++     L
Sbjct: 275 MIVYGLILMVIMIFLPQGL 293


>gi|149914806|ref|ZP_01903336.1| branched-chain amino acid ABC transporter permease [Roseobacter sp.
           AzwK-3b]
 gi|149811599|gb|EDM71434.1| branched-chain amino acid ABC transporter permease [Roseobacter sp.
           AzwK-3b]
          Length = 318

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 74/324 (22%), Positives = 135/324 (41%), Gaps = 27/324 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +  +  L+ F+ L    S KY   + I  L +V+ A G +++ G  G +S+       IG
Sbjct: 8   ILWMVALVGFILLPQLISVKYYLHLAILALCWVIAAQGQNLIQGYTGYVSIVQAGFMGIG 67

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYS  ++G  Y L +WL I ++  ++    +  G PSL+ +G Y A+ TL  + +   +L
Sbjct: 68  AYSTALMGLHYDLPVWLTILLAPCVTAVFAVFTGYPSLRVKGHYFAVVTLAFNLVIFIVL 127

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + W  +T G+AGI    +            R               YY +L +  L   +
Sbjct: 128 MNWHDLTQGEAGITGIPKPGGKDGLFNWRDRE------------TYYYFVLIIAALMTGL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              + R+ I      IR N+    +L       KL AF  S+ + G+AGA +A  +  I+
Sbjct: 176 AALIVRSRIGQNLIAIRQNEDLVGALGIPAWKYKLFAFVTSAMYAGLAGAVYAHYQSFIN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P++F  ++++  I  VI+GG  +++        ++ + E                    +
Sbjct: 236 PEIFGVAQSLDAILAVIIGGSGTIAGPVIGAFFVVFLPEYLRF---------------AD 280

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                L  + L L  +     ++ 
Sbjct: 281 SFRLILYGLVLVLATIFMPRGIVG 304


>gi|300309520|ref|YP_003773612.1| branched-chain amino acid ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300072305|gb|ADJ61704.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 404

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 98/377 (25%), Positives = 171/377 (45%), Gaps = 40/377 (10%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ N     + LL ++  +++F F+       ++  +    L+Y+M A GL++VVG  
Sbjct: 6   FDMKRNPQQARISLLLLLALMIVFPFVAQQFGNSWV-RIMDVALLYIMLALGLNVVVGFA 64

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRY--------------------------------GLS 91
           GLL L  +  YAIGAYS  +L S                                   LS
Sbjct: 65  GLLDLGYIAFYAIGAYSAGLLASPQFAAVIESFVNTYPSVGNFLVWLCGPEIVQNGIHLS 124

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW---KPITNGKA 148
           +WL++P+SA ++   G ++G P+LK RGDYLAI TL   EI +  +        ITNG  
Sbjct: 125 LWLIVPISAFLAALFGALLGAPTLKLRGDYLAIVTLGFGEIIRIFMNNLNAPVNITNGPQ 184

Query: 149 GIYVADRLYFLGTTVRSLIRFFRF---PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           GI + D +   G ++                +      Y++ L +C       + L+ + 
Sbjct: 185 GINLIDPIKVFGVSLAGEPGSGSMVKVFGMSMPSVNAYYFLFLLLCIGVIFFSVRLQDSR 244

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +  AW  IR+++ A  ++       KL AFA+ ++F G+AGA F A +  +SP+ F  +E
Sbjct: 245 LGRAWVAIREDEIAAKAMGINTRNVKLLAFAMGASFGGVAGAMFGAFQGFVSPESFSLTE 304

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-FDCSFNMRHTTLM 324
           +I V+++V+LGG+  +  +     IL  + E+   +      ++         +    L 
Sbjct: 305 SIAVLAMVVLGGIGHIPGVVLGGVILAALPEVLRHVVEPVQMAIFGKVWIDAEVLRQLLY 364

Query: 325 VIALFLVILMRSHSLLR 341
            +A+ +++L R   L  
Sbjct: 365 GLAMVVIMLTRPAGLWP 381


>gi|222479574|ref|YP_002565811.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239]
 gi|222452476|gb|ACM56741.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239]
          Length = 393

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 131/353 (37%), Gaps = 23/353 (6%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L +       LL   L       Y   +     +Y + ++GL+   G  GL++ +  
Sbjct: 19  AWVLGVSVAFMLFLLGALLTGALGPTYFLFLVGLAGMYALLSFGLNAQWGFTGLINFSVA 78

Query: 72  IAYAIGAYSYVILGSRYG-----LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
             + IGAY   ++ +         +  + + V+ + +    +++G+P+L+ R DYLAIA+
Sbjct: 79  AFFGIGAYGSALMTASGSPIAGGFNPIVGLVVALVAAFVLALLIGIPTLRLRADYLAIAS 138

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE------ 180
           L ++E+ + I++  + +TNG AG+      +     + +           VI        
Sbjct: 139 LGLAEVVRLIVLNERWLTNGSAGLRGIPGFFKGWPVLSTFPETMPGLRLVVIPGSPVILE 198

Query: 181 ------IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                 +    ++L     +  ++    ++      RTIR ++    +L       K+ +
Sbjct: 199 TAFWQALLNVLLVLSFAGAAYFVLRRAHQSPWGRVLRTIRSDEDLARALGKNTYSFKMQS 258

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F + S  + +AG F+      + P              VILGG  S         +++ +
Sbjct: 259 FILGSLIMALAGVFYTHLNLYVGPGDLDPITTFYAWVAVILGGSGSNRGALFGGIVIVTI 318

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
            E    +N       +            L+ + +  V+  R   +L  +    
Sbjct: 319 REGTRFLND------VALPIDPAPLRLLLIGVVIVAVMRYRPQGILPPQRELI 365


>gi|311109566|ref|YP_003982419.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310764255|gb|ADP19704.1| inner-membrane translocator 69 [Achromobacter xylosoxidans A8]
          Length = 590

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 67/325 (20%), Positives = 130/325 (40%), Gaps = 30/325 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L  V          A     Y   +     +Y + A G++++VG  G  SL     +A G
Sbjct: 8   LITVALAAALAAFAALVDNDYYLRIVFMACVYYLCAAGVNVLVGYAGQKSLGQAGLFAAG 67

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  +L SR+ +  WL +  + +++G  G+++ LPSL+ +G YLA+ TL    + + I+
Sbjct: 68  AYTAALLTSRWQVDPWLALAAAPVVAGVFGVLIALPSLRVKGPYLAMVTLAFGIVMEKIV 127

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +W  +  G +G++    L + G    +                   +  L +C  +  +
Sbjct: 128 TEWVDVFGGPSGLFGIMPLTWGGNAFTNQQW---------------VWFALVLCVATQLL 172

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  +       A  +++ ++ A  S+   +  AK+ AF V++   G+AGA  A     I+
Sbjct: 173 LRNVLDGRFGRALLSVQADEIASSSVGVRVYRAKVIAFVVAAVTCGIAGALVAQQNQYIN 232

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            D   F+ +I ++ +V+ GG  S +  A     L  +  L                  + 
Sbjct: 233 SDFIGFNLSIFILLLVLFGGAGSKAGPAVGAIALTIIDALLAR---------------WP 277

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                     L   +      ++ L
Sbjct: 278 SVQHFFYGALLLFALYFMPGGVMGL 302


>gi|153815310|ref|ZP_01967978.1| hypothetical protein RUMTOR_01544 [Ruminococcus torques ATCC 27756]
 gi|317501668|ref|ZP_07959859.1| hypothetical protein HMPREF1026_01803 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331088449|ref|ZP_08337364.1| hypothetical protein HMPREF1025_00947 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847372|gb|EDK24290.1| hypothetical protein RUMTOR_01544 [Ruminococcus torques ATCC 27756]
 gi|316896919|gb|EFV18999.1| hypothetical protein HMPREF1026_01803 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330408216|gb|EGG87704.1| hypothetical protein HMPREF1025_00947 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 355

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 72/337 (21%), Positives = 141/337 (41%), Gaps = 24/337 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  K + I   L +   +++   + A      ++ + + + IY++ A  L++VVG LG L
Sbjct: 9   KTTKNNIITYALVIAAFVIMQSLINAGSISSLLEGLMVPLCIYIIMAVSLNLVVGVLGEL 68

Query: 67  SLNCVIAYAIGAYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           SL       +GA++                   +L + +    +   G+++G+P L+ +G
Sbjct: 69  SLGHAGFMCVGAFASAFFSKCMRDTIESASLRFFLALLIGIAAAAIFGILIGIPVLRLKG 128

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           DYLAI TL   EI +N++       +     +    +  L       +            
Sbjct: 129 DYLAIVTLAFGEIIKNLVNVLYIGKDSNGFHFSTKDVMALNMEPDGKVIINGPQGITGTP 188

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
           +   +++   +  ++  I+L L  +    A   IRDN+ A  S+   I   KL AF +S+
Sbjct: 189 KDATFFIGFILILITLFIVLNLIHSRDGRAIMAIRDNRIAAESVGINITKYKLMAFTISA 248

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSEN--IIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           A  G AG  +A +   ++ +   F  N  I+++  V+LGG+ ++     A  IL  + E+
Sbjct: 249 AMAGAAGVLYAHNLSTLTANTNNFGYNMSIMILVFVVLGGIGNIRGSIIAAVILTLLPEM 308

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
             G++ Y                  +  I L +++L 
Sbjct: 309 LRGLSDY---------------RMLIYAIVLIVMMLF 330


>gi|15806057|ref|NP_294760.1| branched-chain amino acid ABC transporter permease [Deinococcus
           radiodurans R1]
 gi|6458767|gb|AAF10611.1|AE001955_3 branched-chain amino acid ABC transporter, permease protein
           [Deinococcus radiodurans R1]
          Length = 471

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 147/350 (42%), Gaps = 22/350 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V    ++F+     +       + IQ+LI+   A GL+IVVG  GLL L  +  +A+GA
Sbjct: 77  LVYALGIVFVLPYMGQHNTSYFDLVIQMLIFAALALGLNIVVGLAGLLDLGYIAFFAVGA 136

Query: 79  YSYVILGSRYGLS---------------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           Y + I GS                     WL IP++   +   G+++GLP LK +GDYLA
Sbjct: 137 YLWGIFGSPQFGEITGNAAFAAGVNPALFWLFIPLAVAAAALVGVLIGLPVLKLKGDYLA 196

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           I TL + E+ +              G    D +          I      S       F+
Sbjct: 197 IVTLGLGEVIRIFANNL----GVTNGPQGIDAIQSAPVPWLDNIAKSLGFSEDQYRLFFL 252

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           Y ++L +  +   +   L R+ I  +W  IR+++ A  ++   ++  KL AFA  ++F G
Sbjct: 253 YLLVLVVIGIVVVVNQRLDRSKIGRSWIAIREDEVAAQAMGVPLLRTKLLAFATGASFAG 312

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
             G  FAA +  I P  F + ++I V+S+VILGGM +++ +     ++  +  +      
Sbjct: 313 AMGVIFAAKQAFIDPKSFDYFQSIGVLSMVILGGMGNIAGVMVGAVVVTLLNLMVLPTIS 372

Query: 304 YYFNSLLK---FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
               +       +   +     +  + L  ++L R   L+        + 
Sbjct: 373 EVMQAQFPNINQNLDPSKYQRLIFGLVLVFMMLYRPEGLVPSERRKAEMH 422


>gi|27382009|ref|NP_773538.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27355179|dbj|BAC52163.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 554

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 73/312 (23%), Positives = 131/312 (41%), Gaps = 29/312 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                  Y+    I   +  M A  L++V G++G +SL      AIGAY+  +L   + +
Sbjct: 271 PLFPVSFYVLQTLINAWLLGMLALSLTLVAGTIGQVSLGHAALLAIGAYTSALLSLSFAV 330

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + L I    ++S A G  +  PS + RG Y++IATL + EI   +++ W+ +T G  GI
Sbjct: 331 PVGLAIIGGGLMSAALGTALISPSFRLRGHYVSIATLAIGEIVSLVILNWESVTRGPIGI 390

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                L   G                ++    +Y+  L +  + A +   L  + +  ++
Sbjct: 391 SGIPPLSLFGYD--------------LVSPSSVYWFSLAVMVVLALLQARLLGSHLGRSF 436

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R IRD+  A  +   ++   K  AF       G++G   A     I+ + F   ++I+ +
Sbjct: 437 RAIRDDDIAARAYGLSLNRYKSLAFIFGGFAAGVSGGIAAHLYSYINHETFNTQQSILAL 496

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           ++VILGG+ ++      +  L+G+ EL      Y                  +  I L L
Sbjct: 497 TVVILGGLGNVVGAIVGSVALVGLPELFRIAAEY---------------RILIYGIVLLL 541

Query: 331 VILMRSHSLLRL 342
           ++  R   LL  
Sbjct: 542 LVRFRPQGLLGT 553



 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/171 (11%), Positives = 53/171 (30%), Gaps = 1/171 (0%)

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                  + S +   RF             +       +  + ++LR + +  A R    
Sbjct: 61  FSPNPRALPSQLPDVRFQIGGGTIGPLDLLIAGVGITSALLLFVFLRYSKLGWAVRATAQ 120

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A   +   +     + F +++A  G++G       ++I          +  +   ++
Sbjct: 121 DRDAAMQMGVDVNRVNQAVFGIAAALGGVSGMLVGMYYNQID-TAMSLQATLKGVVAEVV 179

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           GG  ++      + +L  V      +    + +L  F     +       +
Sbjct: 180 GGAGNVPGAVIGSLLLGLVESYGVAVFGTSYRNLFAFLLLVVVLVLRPNGL 230


>gi|163846659|ref|YP_001634703.1| inner-membrane translocator [Chloroflexus aurantiacus J-10-fl]
 gi|222524461|ref|YP_002568932.1| inner-membrane translocator [Chloroflexus sp. Y-400-fl]
 gi|163667948|gb|ABY34314.1| inner-membrane translocator [Chloroflexus aurantiacus J-10-fl]
 gi|222448340|gb|ACM52606.1| inner-membrane translocator [Chloroflexus sp. Y-400-fl]
          Length = 352

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 84/320 (26%), Positives = 141/320 (44%), Gaps = 10/320 (3%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  +L+ + +    + +Y  ++   I I  + A GL+I+VG  G +S+      A+GAY+
Sbjct: 26  IVLVLVAVLIFPWFADRYWLNLANTIAIAAIGAIGLNILVGYTGQISIGHGGFLAVGAYT 85

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +L    G  +WL IP+++  + A G   GLPSL+ +G YLAIATL   EI   +L   
Sbjct: 86  AGLLAVHLGTPMWLTIPIASFFTAAVGAFFGLPSLRLKGLYLAIATLASQEIIIWLLTHG 145

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           K +  G++          L     +   F          +   Y+V L    L+   +  
Sbjct: 146 KLLGIGES----------LSLPRATNNLFGLPMEWLGNNDFAFYWVCLAFLILTVIFVSN 195

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L RT    A+  IRD   A   +   +   KL AFA SS F G+AGA  A  R  IS + 
Sbjct: 196 LFRTRTGRAFVAIRDQDIAAQVIGVDLFRYKLLAFATSSFFAGLAGALTAHYRGVISWER 255

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F    +I+ ++++I+GG+ S+S      A +I +      M       +   +       
Sbjct: 256 FTIETSILYLAMIIIGGLGSVSGSIYGAAFMILLPAFLSNMARTLSGVVPDINSYLPYIQ 315

Query: 321 TTLMVIALFLVILMRSHSLL 340
                +A+ L ++     ++
Sbjct: 316 QGAFGLAIILFLIFEPEGIV 335


>gi|319652083|ref|ZP_08006203.1| hypothetical protein HMPREF1013_02815 [Bacillus sp. 2_A_57_CT2]
 gi|317396231|gb|EFV76949.1| hypothetical protein HMPREF1013_02815 [Bacillus sp. 2_A_57_CT2]
          Length = 347

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 72/320 (22%), Positives = 137/320 (42%), Gaps = 15/320 (4%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V+ LL    +    +  YI  +     I  + A GL+I+ G  G +S+       +G Y+
Sbjct: 26  VFILLAVFAVFPMLASDYIIGLATLCGIAAIGAIGLNILTGFTGQISIGVGAFLGVGGYT 85

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             IL ++ GLS W+ +P + +++   G + GLPSL+ +G YLAIATL    I   ++ +W
Sbjct: 86  SAILTAKLGLSFWIAMPTAGIVTAIVGGLFGLPSLRLKGLYLAIATLAAQVIILFVISRW 145

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G AG+ ++                              YY++  +  ++A+  L 
Sbjct: 146 DALTGGTAGMVLSRPELGSFVFYSERSY---------------YYLMFTVLIITAAFTLN 190

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L R+ +  A+  +RD   A   +   +   K+ AF VSS F+G+AGA        +SP++
Sbjct: 191 LFRSRVGRAFIAVRDRDVAAEVMGIDLFKYKVLAFIVSSFFVGIAGALLGHYTMVVSPEL 250

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           +  + +I  ++I+++GG+ S+         +  +  +                       
Sbjct: 251 YSITVSIEYLAIILVGGLGSVFGSIYGAVFITLLPVVLRSGVEMMSGVFPDLSAVLIGMK 310

Query: 321 TTLMVIALFLVILMRSHSLL 340
             +  + + L ++     L 
Sbjct: 311 EVVFGLVIILFLIYEPQGLA 330


>gi|303247275|ref|ZP_07333549.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
 gi|302491434|gb|EFL51322.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
          Length = 348

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 149/320 (46%), Gaps = 8/320 (2%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V       +        Y+  + + I++Y++ A GL+I+ G  GLL L  V  Y IGAY+
Sbjct: 11  VIAAAALAYPLMPFRDVYVLHVLVLIMVYMVLAMGLNILPGFCGLLDLGFVGFYGIGAYT 70

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +L   Y +S WL++P++A+     G+++G+P+L+  GDY AI T   SE+    L   
Sbjct: 71  AGLLTIHYNMSFWLIVPLAALNGAFFGIMLGVPTLRLVGDYFAIVTFGFSELVVLFLTNE 130

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G  G+     +    T + SL+            E+  YY+ + M      ++  
Sbjct: 131 IWLTRGPLGVPGIAPVDINFTWLASLLGVDGRWRYAFRGEVPYYYLGIVMVLFVYLVMRR 190

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  + +  AW  IR++  A  S    ++  K+ AFAVS+    MAG+FFA     ISPDM
Sbjct: 191 LEDSRLGRAWLAIREDSMAAASCGVNLLVYKVIAFAVSAGIGAMAGSFFARWTLFISPDM 250

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           FKF E+ +V+ +V+LGG+ +++       ILI + E+   +                   
Sbjct: 251 FKFWESFLVLCMVVLGGLGNINGALVGAIILIALGEVLRVVLPKLG--------LPAETR 302

Query: 321 TTLMVIALFLVILMRSHSLL 340
                + + L++  R   + 
Sbjct: 303 FLAYGLIMVLIMRYRPGGIF 322


>gi|196232614|ref|ZP_03131466.1| urea ABC transporter, permease protein UrtC [Chthoniobacter flavus
           Ellin428]
 gi|196223376|gb|EDY17894.1| urea ABC transporter, permease protein UrtC [Chthoniobacter flavus
           Ellin428]
          Length = 904

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 43/355 (12%), Positives = 97/355 (27%), Gaps = 38/355 (10%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +  L+A++  + L     +     +  ++  + L Y + A  + ++ G  GLLSL   
Sbjct: 533 LGLATLIALILIVALPALNASGAVSNFTINLWGKYLCYGLLAISVDLLWGYTGLLSLGQS 592

Query: 72  IAYAIGAYSYVILGSRYG----------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           + +++G Y   +                 +  LL      +          P   F    
Sbjct: 593 LFFSLGGYMLGMNLMLMIGKDGQYYKSGNNPNLLPDFMVFLGHTFLPSFWRPFYSFPVAV 652

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF--------------LGTTVRSLI 167
           L +  +            ++    G     +   L +                       
Sbjct: 653 LMVIAVPGLLALIFGFFGFRSRIKGVYFSILTQALTYAAYIFLLQNDVTMGGNNGFTDFK 712

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
           R   +       +  +Y     +         WL  T      R IRD++          
Sbjct: 713 RILGYNLREPATQRGLYIATALLLVAVYVFARWLTTTKFGLVQRAIRDSETRVLFSGYAA 772

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
              KL  F V+     + GA +      I+P      +++  +    +GG  ++      
Sbjct: 773 ANYKLFIFVVAGIIAALGGALYVPQVGIINPSELATDKSLEAVVWCAVGGRGTIVGPIIG 832

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              +  +                     +      ++ +   L++L     ++ L
Sbjct: 833 AIGVNALKSWATT--------------KYPDYWLIILGVLFILIVLFMPKGIVGL 873



 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 70/222 (31%), Gaps = 19/222 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                I ++ A GL+I  G +G++++      A+GAY+  ++   +   + L IP+    
Sbjct: 199 LSTGSILLVAAIGLAITFGLMGVINMAHGELIAVGAYTTYVIQGLFATGVVLQIPLFFTQ 258

Query: 103 SGACGMIMGLPSLKFRGDYLAIA----------------TLIMSEIFQNILIKWKPITNG 146
                +            Y  IA                  ++  +++  L         
Sbjct: 259 PYTLRLSGLGLQGSKLDFYFLIALPMSFIVAALVGILLERCVIRFLYRRPLESLLATWGV 318

Query: 147 KAGIYVADRLYFLGTTVRSLIRFF---RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
              +    RL F    V+     +    +  S + ++    +V+     +     L L R
Sbjct: 319 SLVLQQLFRLTFGANNVQVYSPAYLSGNWTISDITFDWNRVFVIGFAVVIIIGTHLLLTR 378

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           T++    R +  N+     +        +  F   S   G  
Sbjct: 379 TSLGLLIRAVVQNRTMAACMGVKTERVNMLTFGFGSGPRGPG 420


>gi|316935607|ref|YP_004110589.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315603321|gb|ADU45856.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 357

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 69/343 (20%), Positives = 145/343 (42%), Gaps = 27/343 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           +IF  R ++   IL ++ V +               Y  S+ IQI I+ + A GL+I+VG
Sbjct: 21  TIFPTRTSRNAAILGIVLVCFA--------PFVLTGYWLSILIQIGIFGIAALGLNILVG 72

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G +S+     + +GAY+   L + + + ++  IP++ +I+   G++ GLP+ + +G Y
Sbjct: 73  FTGQISIGHAAFFLLGAYTSAYLNNHFPIPVFFAIPLAGVITALVGLVFGLPAARLKGLY 132

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           L IATL    I  +   + +  T G           F                       
Sbjct: 133 LVIATLAAQYILIDFFSRAEWFTGGSVPAMANPFSLFGYELRGDKQY------------- 179

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +YV+L    +S  ++  L R+    A   +RD+  +   +   +   +  +F +++ F
Sbjct: 180 --FYVVLAYLLVSYILVTNLMRSRDGRALVAVRDHYLSAEIMGINLTKYRTLSFGLAAFF 237

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+ GA +   +  +S + F    +I+ ++++I+GG+ S+S     TA ++ + E    +
Sbjct: 238 AGIGGALYGHYQMVVSNEGFGIERSILFLAMIIIGGIGSISGTLMGTAFVVLLPETMEWL 297

Query: 302 NFYYFNS----LLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +           L+ + +        + + +   ++     L 
Sbjct: 298 SEALKGGAIDRALQLNTNLTFLREIAIGLIIIAFLVFEPDGLA 340


>gi|121606097|ref|YP_983426.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120595066|gb|ABM38505.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 370

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 83/311 (26%), Positives = 143/311 (45%), Gaps = 17/311 (5%)

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSA 100
           +IVVG  GLL L  V  +A+GAY + +LGS +                 L IW  IP +A
Sbjct: 49  NIVVGYAGLLDLGYVAFFAVGAYMFALLGSPHLAEAFPWIAANFPEGLHLPIWATIPAAA 108

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
            ++G  G+++G P+LK RGDYLAI TL   EI +  L       N   G     ++  + 
Sbjct: 109 ALAGLFGVLLGAPTLKLRGDYLAIVTLGFGEIIRVFLNNLDRPINLTNGPKGISQIDSMK 168

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                L +   F           YY+ L +   S  +   L+ + I  AW  IR+++ A 
Sbjct: 169 FFGFDLGKSHTFFGIEFTSVSMYYYLFLALVIFSVILCHRLQNSRIGRAWMAIREDEIAA 228

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++       KL AF + + F G++G+ FA+ +  +SP+ F   E+++++++V+LGG+  
Sbjct: 229 KAMGINTRNMKLLAFGMGATFGGVSGSMFASFQGFVSPESFSLMESVMIVAMVVLGGIGH 288

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L  +     +L  + E+   +      ++       ++    L+ +A+  V+LMR   L 
Sbjct: 289 LPGVILGALLLAALPEVLRHVAGP-LQAMTDGRLDSSILRQLLIALAMITVMLMRPRGLW 347

Query: 341 RLRTPSNFLER 351
                   L +
Sbjct: 348 PSAEHGKSLNK 358


>gi|226944690|ref|YP_002799763.1| ABC-transporter permease [Azotobacter vinelandii DJ]
 gi|226719617|gb|ACO78788.1| Bacterial ABC-transporter, permease protein [Azotobacter vinelandii
           DJ]
          Length = 424

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 97/322 (30%), Positives = 153/322 (47%), Gaps = 22/322 (6%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               + KY+ ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY   +     GL
Sbjct: 108 FPFFAGKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYEYLGL 167

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W ++P++A+++   G ++G P L+  GDYLAI TL   EI + +L  W   T G  G+
Sbjct: 168 GFWSVLPLAALMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGM 227

Query: 151 YVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
            V    +      R           FF    +  +  +F+Y VLL    L   +   L R
Sbjct: 228 SVPAPTFLGLEFGRRARDGGVPFHEFFGIAYNPNLKFLFIYVVLLLTVLLVLYVKGRLVR 287

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
             I  AW  +R+++ A  ++    +  KLSAF + ++  G+AG FFA+ +  ++P  F F
Sbjct: 288 MPIGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGLAGVFFASYQGFVNPTSFTF 347

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            E+ ++++IV+LGGM S   +  A  +L    EL      Y                  L
Sbjct: 348 FESALILAIVVLGGMGSTLGVVLAAFMLTVAPELLRSFADY---------------RVLL 392

Query: 324 MVIALFLVILMRSHSLLRLRTP 345
             + + L+++ R   L+R+   
Sbjct: 393 FGMLMVLMMIWRPRGLIRISRR 414


>gi|154496291|ref|ZP_02034987.1| hypothetical protein BACCAP_00578 [Bacteroides capillosus ATCC
           29799]
 gi|150274374|gb|EDN01451.1| hypothetical protein BACCAP_00578 [Bacteroides capillosus ATCC
           29799]
          Length = 361

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 83/342 (24%), Positives = 146/342 (42%), Gaps = 22/342 (6%)

Query: 1   MSIFSLRLNKY--DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSI 58
           M   S R  +   + I   + +   +++ + +        + S  I I  YV+ A  L++
Sbjct: 1   MKTVSTRRRRLVSNSITYGIVIAAYVIIQILMAGDNLSNSLQSQLIPICAYVVMAVALNL 60

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW-------LLIPVSAMISGACGMIMG 111
           VVG  G LSL      ++GA+S VI  +    +I        + + V A+ +G  G I+G
Sbjct: 61  VVGISGELSLGHAGFMSVGAFSGVIAATCLQNTIPSDALRLAVSMVVGAICAGVAGFIVG 120

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           +P L+ RGDYLAI TL   EI +NI+       + +      +    LG           
Sbjct: 121 VPVLRLRGDYLAIVTLAFGEIIKNIINVLYIGLDEEGLHLSLESEAALGLGEGGKAILSG 180

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
              +  I +I  +     +  ++ +++L L  +    A   +RDN+ A  S+       K
Sbjct: 181 PMGATGINKISSFTAGFILVLITITVVLNLVNSRSGRAIMAMRDNRIAAESVGIGATKYK 240

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           L AF  S+   G AG  +A +   ++   F F+ +I+++  V+LGG+ ++     A A L
Sbjct: 241 LMAFVTSAVLAGAAGTLYAMNYSSVTAKKFDFNTSILILVFVVLGGIGNIRGSIIAAAFL 300

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
             + EL   +N              +     +  I L LV++
Sbjct: 301 TVLPELLRSLN-------------LDKYRMLVYAIVLILVMI 329


>gi|46198907|ref|YP_004574.1| branched-chain amino acid transport system permease protein
           livM/branched-chain amino acid transport ATP-binding
           protein livG [Thermus thermophilus HB27]
 gi|46196531|gb|AAS80947.1| branched-chain amino acid transport system permease protein
           livM/branched-chain amino acid transport ATP-binding
           protein livG [Thermus thermophilus HB27]
          Length = 585

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 50/304 (16%), Positives = 110/304 (36%), Gaps = 21/304 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             ++     I  + A  L ++ G  G+ S        + AY+  +L +R G+S W  + +
Sbjct: 22  YLTLLNFFAIAALVALSLYVLTGLGGMTSFAQAAFMGVAAYATALLTTRAGVSPWAGLAL 81

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++ A  +++GL +++ +G +L ++T+        +      +T G  G+     L  
Sbjct: 82  GLGLTLAFALVLGLLTVRLKGHFLPLSTIAWQVALYILAGNLVGLTGGHTGLTDLPALAL 141

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  + S  R+       +   +                +  LR + +  A   +R +  
Sbjct: 142 FGLPLDSPFRYAFLSLFLLALLVLA--------------LHNLRESRLGRALLALRGDAL 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              S        +L AF ++    G+AG  +A     ++P  F    +I  + + + GG+
Sbjct: 188 TAASFGVDPAALRLKAFLLAGGIAGLAGFLYAHFLRFVNPTPFSLEASIKYLVMAVAGGV 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++  +    A+  G+ +    +                   T    + L  ++L     
Sbjct: 248 GTIPGVVLGAALFTGLEDWLKDLLPLLLGRQ-------GNYETIAYGLVLAGILLFAPQG 300

Query: 339 LLRL 342
           L  L
Sbjct: 301 LWPL 304


>gi|239905544|ref|YP_002952283.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
 gi|239795408|dbj|BAH74397.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
          Length = 348

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 78/339 (23%), Positives = 139/339 (41%), Gaps = 24/339 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            +F  R  K    L   A+                KY+ S+   I I V+ A  L+++ G
Sbjct: 17  QLFPSRFQKIALALFFAALCLA--------PWAMNKYLVSILCLINISVIGAVSLNLLTG 68

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           S G +SL     + +GAY+   L    GL   L +P + +++   GM+ GLPSL+ +G Y
Sbjct: 69  SCGQISLGHGAFFGVGAYTAAYLA-NLGLPFVLALPGAGLVTALTGMVFGLPSLRLKGIY 127

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LAIATL    I + + + W  +T G  G+ +             L               
Sbjct: 128 LAIATLAAQLILEYVFLHWDAVTGGSGGMALDAPSIAGFAFDTDLKM------------- 174

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +Y+ LG+  L    +  + RT +  A+  IRD   +   +   +   KL AF +SS  
Sbjct: 175 --FYLTLGVAVLCVLAVSNVMRTRLGRAFVAIRDYHLSAEIVGVDLFAYKLRAFGLSSFL 232

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+ GA +A+    I+P+ F    ++  ++++I+GG+ S+         +  + E    +
Sbjct: 233 AGVGGALWASYTMYITPEQFGIGLSVSYLAMIIIGGLGSVIGGVFGAVFITILPECLNFL 292

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
             +   +      +       +  + L L ++     L 
Sbjct: 293 AQHAGAAFTDLSGALLAMKEGVFGLVLVLFLIFEPEGLA 331


>gi|148558530|ref|YP_001257384.1| branched-chain amino acid ABC transporter permease/ATP-binding
           protein [Brucella ovis ATCC 25840]
 gi|148369815|gb|ABQ62687.1| branched-chain amino acid ABC transporter, permease/ATP-binding
           protein [Brucella ovis ATCC 25840]
          Length = 609

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 26/325 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A    L   L L    +  ++  + I I ++   +   +IV G  G +SL   + Y IG
Sbjct: 22  IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  ++    G+S W  + + A I+   GM++  P  + +G + ++A++   E+F+ + 
Sbjct: 82  GYT-GVILFNMGISPWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 140

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + +  +T G  G+ +  +L ++    R                     ++ GM  ++ +I
Sbjct: 141 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 186

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +RR+ +       R+ + A  +     +  +L A A+SSA   M G F A     I 
Sbjct: 187 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 246

Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P  MF  + +I +    ++GG+ +++       +L+ + E            L  F    
Sbjct: 247 PAAMFSLAFSIQIAMFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 302

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 +  + L LV+L   + ++ 
Sbjct: 303 ------VYGLVLILVVLFMPNGIMG 321


>gi|162456886|ref|YP_001619253.1| putative ABC transport protein, permease component [Sorangium
           cellulosum 'So ce 56']
 gi|161167468|emb|CAN98773.1| putative ABC transport protein, permease component [Sorangium
           cellulosum 'So ce 56']
          Length = 416

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 68/337 (20%), Positives = 129/337 (38%), Gaps = 27/337 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
                         + +  ++ V+ A  L+++ G  G  S+       IGAY+  ++   
Sbjct: 23  FGFETLLPDAAWRQLALFAMVNVIAALSLNVINGMAGQFSIGHAGFVGIGAYTGAVVAGN 82

Query: 88  YGLS--------------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
                             +   +  S +++   G+++GLPSL+ RGDYLAI TL  +EIF
Sbjct: 83  LHQHLGGGDPLFGNSFVVMPAALLASGLVAALFGLVVGLPSLRLRGDYLAIVTLGFAEIF 142

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           +  L      T G                       +  P    + +    + + G   L
Sbjct: 143 R--LTIATATTGGPD-----QGALGKLLGALGGPIGYAGPDDTGVPQYAGPFWIFGAVVL 195

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS- 252
           +  +   L+ +    A R +R+++ A  ++       K+++F +S+A  G+AGA  ++  
Sbjct: 196 ATILAWRLKFSGWGRALRALREDEIASAAVGVDPTRYKVTSFVISAAGGGIAGALLSSMR 255

Query: 253 --RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG---VVELCCGMNFYYFN 307
                + PD F F+ +   I++VILGG  S+S        +     ++E   G++     
Sbjct: 256 DGNPTVQPDQFTFNYSFDAITMVILGGSGSVSGAILGGVFVTFTVKLIEQLQGLDSVLAL 315

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                    N     L    L  ++++R   L   R 
Sbjct: 316 KAAYPALDLNALRMVLYAAILIGLMVLRPEGLFGERE 352


>gi|156740562|ref|YP_001430691.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941]
 gi|156231890|gb|ABU56673.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941]
          Length = 352

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 81/320 (25%), Positives = 143/320 (44%), Gaps = 10/320 (3%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  +L+ +      + +Y  ++   I I  + A GL+I+VG  G +S+      A+GAY+
Sbjct: 26  IALVLIAVLTFPWFADRYWLNLANTIAIAAIGAIGLNILVGYTGQISIGHGGFLAVGAYT 85

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +L +R    +W+ IPV++  +   G   GLPS++ +G YLAIATL   EI   +L   
Sbjct: 86  AGLLAARLDAPMWVTIPVASGFTALVGAFFGLPSVRLKGLYLAIATLAAQEIIIWLLTHG 145

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           K +  G++          L     +   F    S+    +   Y+V +G   L+   +  
Sbjct: 146 KLLGIGES----------LTLPQAANNLFGFPLSALGNNDFAFYWVTVGFLILTVVFVSN 195

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L R+    A+  IRD   A   +   +   KL AFA SS F G+AGA  A  R  IS + 
Sbjct: 196 LFRSRTGRAFVAIRDQDIAAQVIGVDLFRYKLLAFATSSFFAGLAGALTAHYRSIISWER 255

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F    +I+ ++++I+GG+ S+S      A +  +  L   +       +   +       
Sbjct: 256 FTIDTSILYLAMIIIGGLGSVSGSIYGAAFMTLLPALLSNLARAISGVVPDINTYLPYIQ 315

Query: 321 TTLMVIALFLVILMRSHSLL 340
                +A+ L ++     ++
Sbjct: 316 QGAFGLAIVLFLIFEPEGIV 335


>gi|317154713|ref|YP_004122761.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2]
 gi|316944964|gb|ADU64015.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2]
          Length = 396

 Score =  116 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 98/315 (31%), Positives = 153/315 (48%), Gaps = 29/315 (9%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +    + +Y + + I +LIY+    GL+IVVG  GLL L  +  Y +GAY+Y +L   +G
Sbjct: 102 IYPQFAGRYGNDVAISVLIYICLGLGLNIVVGLAGLLDLGYIAFYGVGAYAYALLSLHFG 161

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           LS W  +PV+A+++   G I+G P+L+ RGDYLAI TL   EI + IL  W  +TNG  G
Sbjct: 162 LSFWACLPVAALLAAISGCIIGYPTLRMRGDYLAIVTLGFGEIVRLILNNWMSLTNGPNG 221

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           I    R    G    S                 +YYV+LG+   +   +  L  + I  A
Sbjct: 222 ILAIPRPELFGFGFAS--------------LSSLYYVILGIAVFTVLAVYRLNFSRIGRA 267

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
           W  IR+++ A   +       KL A+A+ + F G+AGAFFAA    + P+ F F E+ +V
Sbjct: 268 WEAIREDETAAELMGVNTFLLKLLAYAMGATFAGLAGAFFAARMRFVGPESFTFLESAMV 327

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           +++V+LGGM S+  +      L+ + EL      Y                  +    + 
Sbjct: 328 LAMVVLGGMGSIPGVILGVLALVALPELFRDFELY---------------RMLVFGGVMC 372

Query: 330 LVILMRSHSLLRLRT 344
            ++L+R   L   + 
Sbjct: 373 TMMLIRPAGLWPAKR 387


>gi|260219963|emb|CBA27026.1| hypothetical protein Csp_A00220 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 389

 Score =  116 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 73/320 (22%), Positives = 137/320 (42%), Gaps = 20/320 (6%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L++ L        +Y  +    +LIY +   GL ++ G  G  SL       +GAY+  
Sbjct: 58  ALVVLLVAAPWLLTEYSLAQLNLVLIYAIAGLGLMLLAGFTGQFSLGHAAFLGVGAYAQA 117

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
              +       + + +S  +S   G+++GLP+L+ +G YL +ATL    I + +  +W+ 
Sbjct: 118 YFTNAGVP-FVVSLALSGTLSALMGIVVGLPALRLKGIYLGMATLSFGFIIEEVFARWES 176

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G AG                 +   +     +      Y+V L +  L    IL L 
Sbjct: 177 VTGGNAGK---------------AVGVIKMAGYELGSGQGFYFVCLTVTVLCTLGILNLL 221

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+    A+  IRD++ +  S+   + + K  +F++S+A  GMAGA +A +   ISPD F 
Sbjct: 222 RSPTGRAFVAIRDSEISAQSMGIHLAYYKTLSFSISAALAGMAGALYAHNLRFISPDQFN 281

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
             ++I ++ ++++GG+ S+  +      LI + +       +    L +F        + 
Sbjct: 282 LLQSIDLLLMIVIGGLGSVHGVFLGAIFLIILPQGISAGKEF----LPEFIGQAPGLKSV 337

Query: 323 LMVIALFLVILMRSHSLLRL 342
           +    L   +L     L   
Sbjct: 338 IYGSVLIAFVLFEPMGLYGR 357


>gi|27381076|ref|NP_772605.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354242|dbj|BAC51230.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 357

 Score =  116 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 68/343 (19%), Positives = 145/343 (42%), Gaps = 27/343 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           +IF    ++   I+ +L +                 Y  S+ IQI I+ + A GL+I+VG
Sbjct: 21  TIFPTATSRNFAIVGVLLLCLV--------PQFLGGYWLSILIQIGIFSIAALGLNILVG 72

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G +S+     + +GA++   + +   + ++  IP++ +++   G++ G+P+ + +G Y
Sbjct: 73  FTGQISIGHAAFFLLGAFTSAYISNNAPIPVFFAIPLAGVVTALVGLVFGIPAARLKGLY 132

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           L IATL    I  +   + +  T G                V +    F      +  + 
Sbjct: 133 LVIATLAAQYILLDFFSRAEWFTGGS---------------VPASANPFSIFGFTLRGDK 177

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +YV+L     S  ++  L RT    A   IRD+  +   +   +   +  +F +++ F
Sbjct: 178 QYFYVVLAYVLASYILVTNLMRTRDGRALVAIRDHYLSAEIMGINLTKYRTLSFGLAAFF 237

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AGA +A  +  +S + F    +I+ ++++I+GG  S+      TA ++ + E    +
Sbjct: 238 AGIAGALYAHYQLVVSQEGFGIERSILFLAMIIIGGTGSIMGTLMGTAFVVLLPESMEFL 297

Query: 302 NFYYFNS----LLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           + Y         L  + +        + + +   ++     L 
Sbjct: 298 SIYLKGGAIDKALSLNNNITFLREIAIGVIIIAFLMFEPDGLA 340


>gi|254712221|ref|ZP_05174032.1| high-affinity branched-chain amino acid transport system permease
           protein LIVH / high-affinity branched-chain amino acid
           [Brucella ceti M644/93/1]
 gi|254715292|ref|ZP_05177103.1| high-affinity branched-chain amino acid transport system permease
           protein LIVH / high-affinity branched-chain amino acid
           [Brucella ceti M13/05/1]
 gi|261217020|ref|ZP_05931301.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261319890|ref|ZP_05959087.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|260922109|gb|EEX88677.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261292580|gb|EEX96076.1| conserved hypothetical protein [Brucella ceti M644/93/1]
          Length = 609

 Score =  116 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 26/325 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A    L   L L    +  ++  + I I ++   +   +IV G  G +SL   + Y IG
Sbjct: 22  IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  ++    G+S W  + + A I+   GM++  P  + +G + ++A++   E+F+ + 
Sbjct: 82  GYT-GVILFNMGISPWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 140

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + +  +T G  G+ +  +L ++    R                     ++ GM  ++ +I
Sbjct: 141 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 186

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +RR+ +       R+ + A  +     +  +L A A+SSA   M G F A     I 
Sbjct: 187 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 246

Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P  MF  + +I +    ++GG+ +++       +L+ + E            L  F    
Sbjct: 247 PAAMFSLAFSIQIAIFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 302

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 +  + L LV+L   + ++ 
Sbjct: 303 ------VYGLVLILVVLFMPNGIMG 321


>gi|189424922|ref|YP_001952099.1| inner-membrane translocator [Geobacter lovleyi SZ]
 gi|189421181|gb|ACD95579.1| inner-membrane translocator [Geobacter lovleyi SZ]
          Length = 321

 Score =  116 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 73/320 (22%), Positives = 132/320 (41%), Gaps = 29/320 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
              +  L      S  Y+ ++ + + I+ M A  L++++G  G +SL     + +GAY  
Sbjct: 10  VFAICILLAPLAFSGNYLMNVLVFVGIHTMLAVALNLLLGYAGQISLGHAAFFGLGAYGS 69

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            IL + Y  + WL + V A++ G     +G P LK +G YLA+ATL M  I   +  +W 
Sbjct: 70  GILSTTYEWNPWLAMTVVALVVGGLAFTIGFPILKLKGHYLAMATLGMGIIVYIVFNEWI 129

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G +G      L        S               I  YY++         + + L
Sbjct: 130 DMTEGPSGFSGIPNLELGPLVFDSD--------------IKNYYLVWSFVLGCVLLSVNL 175

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             + I  A+R I D + A   +       K+  FA+S+    +AG+ +A     I+P  F
Sbjct: 176 ANSRIGRAFRAIHDAEVAARVMGVNARLLKVQVFALSAMICAIAGSLYAHVMTFIAPPSF 235

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+ ++ ++++V++GG+ S+        +L  + E    M+ Y                 
Sbjct: 236 GFNISVELLTMVVIGGLGSIYGSFLGALLLTMLPEFLRFMHDY---------------DI 280

Query: 322 TLMVIALFLVILMRSHSLLR 341
                 L ++ +     L+R
Sbjct: 281 VFYGGLLMVMTIFMPGGLVR 300


>gi|297618502|ref|YP_003703661.1| inner-membrane translocator [Syntrophothermus lipocalidus DSM
           12680]
 gi|297146339|gb|ADI03096.1| inner-membrane translocator [Syntrophothermus lipocalidus DSM
           12680]
          Length = 325

 Score =  116 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 72/337 (21%), Positives = 132/337 (39%), Gaps = 41/337 (12%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +L V    L+   + A     Y       + I ++ A  L+++ G  G LSL      
Sbjct: 14  ISVLLVAMFFLVQYLINAQLLDVYYQINLFMMGINIILAVSLNLITGFTGQLSLGHAGFM 73

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GAY   ++ S+ G S+ + +    + +G  G+++G+P+L+ +GDYLAIATL   EI +
Sbjct: 74  AVGAYVAAVMTSKLGYSLPVAVLSGCIAAGVAGVLIGVPTLRLKGDYLAIATLGFGEIVR 133

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +L+    +                                  I ++  +  L     ++
Sbjct: 134 VVLLNIDYVGGAA--------------------------GLIGIAQLTNWTWLFFSVLVT 167

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              I  L  ++   A   +R+N+ A   +       K+ AF V + F G+AGA +A    
Sbjct: 168 LLFIQNLINSSYGRACLAVRENEVAAEMMGVDTTKYKILAFTVGAFFAGLAGALYAHYFF 227

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            I P  F F  +  V+ +V+LGG+ S +    A   L  +                    
Sbjct: 228 IIQPGTFSFFRSFDVLVMVVLGGLGSTTGAVLAAVFLTILSAGLQSF------------- 274

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                   +  + L + ++ R   L+  +  S  + R
Sbjct: 275 --PEIRMVIYSVVLIVTMIYRPQGLMGNKEISLRIFR 309


>gi|160898468|ref|YP_001564050.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160364052|gb|ABX35665.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 393

 Score =  116 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 70/321 (21%), Positives = 135/321 (42%), Gaps = 19/321 (5%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            +L  +F        Y   + I   +Y + A  L+  +GS  + +     +Y IGAY+  
Sbjct: 86  VVLALVFPWVLGGDSYAMHLMIIACLYAVLALALNFQLGSANIPNFATGASYGIGAYASA 145

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +L   +G+S W+ + V+A ++   G ++GLPS++ R  Y A+ T+    +   +L+  + 
Sbjct: 146 LLAIHFGVSFWICLLVAAAVATVFGFLLGLPSMRTRDSYQALVTIAFGIVVHQLLMNLEW 205

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
            T G  G+         G +    I  +      +  +   YYV + +  L+      L 
Sbjct: 206 -TGGANGLVGIPSPTLFGHSFNDPITLWGH---SLPGQANFYYVAVALLGLAIVSAQRLH 261

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            + +  AW  +RD++ A  +    + + K+ AFAV +   G AG  +A     ISPD F 
Sbjct: 262 SSRVGLAWNALRDDEIAARACGINVTWFKVKAFAVDAFLAGFAGTVYAFYVSFISPDNFT 321

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  ++ ++++VI GGM +   +     +L  + E     + Y                  
Sbjct: 322 FLVSVTIMTLVIAGGMDNTLGVIVGAFLLTMLPEKLRAFSDY---------------RIL 366

Query: 323 LMVIALFLVILMRSHSLLRLR 343
              + +   +++R   +   R
Sbjct: 367 FYGLVVIAFLIIRPRGIFPQR 387


>gi|84683937|ref|ZP_01011839.1| branched-chain amino acid ABC transporter, permease protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84667690|gb|EAQ14158.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 659

 Score =  116 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 98/311 (31%), Gaps = 26/311 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---RYGLSIWLLI 96
                   IY + A GL+I  G +G++++       +GAY+  ++      +  SI + I
Sbjct: 370 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQQIIPNHTTSIIVAI 429

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++  ++ A G+ M    +++  +      L+ +      L +      G     +    
Sbjct: 430 PLAFAVTFAAGVAMERLVIRWLYNRPLET-LLATFGISIALQQLAKNIFGTQARPLTSP- 487

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     +      +  V        + +      A  +  ++RT +    R +  N
Sbjct: 488 --------DWLGGAWVLNDVVSISTVRIAIFVLALIFLAVFLFIMKRTRLGLETRAVTQN 539

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                ++        +  F + S   G+AG          S      +  +     V++G
Sbjct: 540 PGMAGAMGINPGRVNMLTFGLGSGIAGIAGVAIGLYAQVTSE--IGQAYIVQSFMTVVVG 597

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++        ++  + +     N     +   +   F +                R 
Sbjct: 598 GVGNIWGTLLGAGLIGSLHKGIEWFNPSNTLAAQTYMIIFIIIFI-----------QFRP 646

Query: 337 HSLLRLRTPSN 347
             ++ L+  + 
Sbjct: 647 RGIIALKGRAA 657


>gi|254691212|ref|ZP_05154466.1| high-affinity branched-chain amino acid transport system permease
           protein LIVH / high-affinity branched-chain amino acid
           [Brucella abortus bv. 6 str. 870]
 gi|254695484|ref|ZP_05157312.1| high-affinity branched-chain amino acid transport system permease
           protein LIVH / high-affinity branched-chain amino acid
           [Brucella abortus bv. 3 str. Tulya]
 gi|254699650|ref|ZP_05161478.1| high-affinity branched-chain amino acid transport system permease
           protein LIVH / high-affinity branched-chain amino acid
           [Brucella suis bv. 5 str. 513]
 gi|254706095|ref|ZP_05167923.1| high-affinity branched-chain amino acid transport system permease
           protein LIVH / high-affinity branched-chain amino acid
           [Brucella pinnipedialis M163/99/10]
 gi|254711607|ref|ZP_05173418.1| high-affinity branched-chain amino acid transport system permease
           protein LIVH / high-affinity branched-chain amino acid
           [Brucella pinnipedialis B2/94]
 gi|256015178|ref|YP_003105187.1| branched-chain amino acid ABC transporter, permease/ATP-binding
           [Brucella microti CCM 4915]
 gi|256029759|ref|ZP_05443373.1| high-affinity branched-chain amino acid transport system permease
           protein LIVH / high-affinity branched-chain amino acid
           [Brucella pinnipedialis M292/94/1]
 gi|256059391|ref|ZP_05449593.1| high-affinity branched-chain amino acid transport system permease
           protein LIVH / high-affinity branched-chain amino acid
           [Brucella neotomae 5K33]
 gi|256256399|ref|ZP_05461935.1| high-affinity branched-chain amino acid transport system permease
           protein LIVH / high-affinity branched-chain amino acid
           [Brucella abortus bv. 9 str. C68]
 gi|260756813|ref|ZP_05869161.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260882630|ref|ZP_05894244.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261215872|ref|ZP_05930153.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|261313532|ref|ZP_05952729.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261319230|ref|ZP_05958427.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261323352|ref|ZP_05962549.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261750114|ref|ZP_05993823.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|265986770|ref|ZP_06099327.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|265999152|ref|ZP_06111581.1| branched-chain amino acid ABC transporter [Brucella melitensis bv.
           2 str. 63/9]
 gi|297249757|ref|ZP_06933458.1| high-affinity branched-chain amino acid transport system permease
           LivH/high-affinity branched-chain amino acid transport
           ATP-binding protein LivG [Brucella abortus bv. 5 str.
           B3196]
 gi|255997838|gb|ACU49525.1| branched-chain amino acid ABC transporter, permease/ATP-binding
           [Brucella microti CCM 4915]
 gi|260676921|gb|EEX63742.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260872158|gb|EEX79227.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260917479|gb|EEX84340.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|261298453|gb|EEY01950.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261299332|gb|EEY02829.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261302558|gb|EEY06055.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261739867|gb|EEY27793.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|263092450|gb|EEZ16703.1| branched-chain amino acid ABC transporter [Brucella melitensis bv.
           2 str. 63/9]
 gi|264658967|gb|EEZ29228.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|297173626|gb|EFH32990.1| high-affinity branched-chain amino acid transport system permease
           LivH/high-affinity branched-chain amino acid transport
           ATP-binding protein LivG [Brucella abortus bv. 5 str.
           B3196]
          Length = 609

 Score =  116 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 26/325 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A    L   L L    +  ++  + I I ++   +   +IV G  G +SL   + Y IG
Sbjct: 22  IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  ++    G+S W  + + A I+   GM++  P  + +G + ++A++   E+F+ + 
Sbjct: 82  GYT-GVILFNMGISPWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 140

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + +  +T G  G+ +  +L ++    R                     ++ GM  ++ +I
Sbjct: 141 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 186

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +RR+ +       R+ + A  +     +  +L A A+SSA   M G F A     I 
Sbjct: 187 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 246

Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P  MF  + +I +    ++GG+ +++       +L+ + E            L  F    
Sbjct: 247 PAAMFSLAFSIQIAMFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 302

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 +  + L LV+L   + ++ 
Sbjct: 303 ------VYGLVLILVVLFMPNGIMG 321


>gi|260905268|ref|ZP_05913590.1| inner-membrane translocator [Brevibacterium linens BL2]
          Length = 358

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 63/326 (19%), Positives = 132/326 (40%), Gaps = 28/326 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  +   L++ L   A   + YI  +    L   +  +G++I++G  G LSL     + 
Sbjct: 9   ILGTLAVLLIIALTPVAFGDENYIMRVITVGLCSAIAVYGMNIILGFTGQLSLAQGGFFG 68

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY+  +L + +  S W    V  + + A G + GL +L+ + +Y AI T+ +  I   
Sbjct: 69  IGAYTVGLLTTDFDWSFWQAFLVGVVGTSAIGYLFGLIALRTKDEYFAIFTMAIGFIIYL 128

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            + +W+ +T+  +G+              S                 M+Y++  +     
Sbjct: 129 TISRWESVTHAHSGVNNVKFPEAGDLIDFSN-------------PTAMFYLVFIILLACV 175

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   +RR+++     TIR ++    ++   +  +K  AFA S+ F G+ G  +A+    
Sbjct: 176 YVTYAIRRSSVGRTLLTIRTSEDLADAIGVNVGLSKQLAFAASAFFGGIGGGLYASVVGF 235

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           I PD     +    +  +++GGM +++     T I+  + EL      Y           
Sbjct: 236 IGPDAATVDKTFEFLMFILVGGMGTVAGPLVGTMIVTFLFELFQDFQAY----------- 284

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  ++   +  +++     ++ 
Sbjct: 285 ----RFIVLGPIIIALVIFAPRGVVG 306


>gi|323699117|ref|ZP_08111029.1| inner-membrane translocator [Desulfovibrio sp. ND132]
 gi|323459049|gb|EGB14914.1| inner-membrane translocator [Desulfovibrio desulfuricans ND132]
          Length = 348

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 66/322 (20%), Positives = 126/322 (39%), Gaps = 16/322 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V   L  L         ++ S+   I I V+ A  L+++ G  G +SL       +GA
Sbjct: 26  LMVGLFLAALCAAPFVLNTHLTSIVNLIFISVIGAVSLNLLTGVCGQISLGHGAFLGVGA 85

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+               I    +I+   GM+ G+PSL+ +G YLAIATL    + + + +
Sbjct: 86  YAAGQCSLHGVP-FLPAILTGGLITALVGMVFGVPSLRLKGIYLAIATLAAQLVLEYVFL 144

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +T G  G+ +                           E+ MY++LL     +  ++
Sbjct: 145 HGGVLTGGSNGLLLEPP---------------SILGFSFDTEVRMYFLLLAFAAGALLMV 189

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + R+    A+ +IRD   +   +   +   KL+AF +SS   G+AG  +      IS 
Sbjct: 190 TNIMRSKYGRAFVSIRDFYLSAEIVGVNLFRYKLAAFGISSFLAGVAGGLWGHYTGYISA 249

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F    +I  ++++++GG+ S+         ++ + E+   +      S          
Sbjct: 250 EQFNIGLSISYLAMIVIGGLGSVLGSVFGAVFIVLLPEILNALANVLAGSWPDVAQYIVA 309

Query: 319 RHTTLMVIALFLVILMRSHSLL 340
               +  + L L ++     L 
Sbjct: 310 LREGVFGLTLILFLIFEPEGLA 331


>gi|294853795|ref|ZP_06794467.1| high-affinity branched-chain amino acid transport system permease
           LivH [Brucella sp. NVSL 07-0026]
 gi|294819450|gb|EFG36450.1| high-affinity branched-chain amino acid transport system permease
           LivH [Brucella sp. NVSL 07-0026]
          Length = 609

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 26/325 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A    L   L L    +  ++  + I I ++   +   +IV G  G +SL   + Y IG
Sbjct: 22  IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  ++    G+S W  + + A I+   GM++  P  + +G + ++A++   E+F+ + 
Sbjct: 82  GYT-GVILFNMGISPWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 140

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + +  +T G  G+ +  +L ++    R                     ++ GM  ++ +I
Sbjct: 141 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 186

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +RR+ +       R+ + A  +     +  +L A A+SSA   M G F A     I 
Sbjct: 187 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 246

Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P  MF  + +I +    ++GG+ +++       +L+ + E            L  F    
Sbjct: 247 PAAMFSLAFSIQIAMFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 302

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 +  + L LV+L   + ++ 
Sbjct: 303 ------VYGLVLILVVLFMPNGIMG 321


>gi|89899084|ref|YP_521555.1| ABC transporter-like protein [Rhodoferax ferrireducens T118]
 gi|89343821|gb|ABD68024.1| ABC transporter related [Rhodoferax ferrireducens T118]
          Length = 598

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 56/322 (17%), Positives = 111/322 (34%), Gaps = 22/322 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  +   L    +   ++  +    I +Y +   GL ++ G  GL S        IGAY+
Sbjct: 19  VVVVACMLLYAVSPVPEFWITQLNYIALYSLVILGLVLLTGIGGLTSFGQAAFVGIGAYT 78

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
              L    G S WL +     I+G   +++G  +L+  G YL +AT+        ++   
Sbjct: 79  SAYLTVHMGWSPWLTVFAGLFITGISALVVGWITLRMSGHYLPLATIAWGLSLYYLMGNL 138

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +     GI     L   G  +                    + +  GM   +A  +L 
Sbjct: 139 DAL-GKYDGILGVPALTVWGWDISQ--------------GRSFFVLAWGMVLFAAFALLN 183

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  +    A + +R +     ++    +  K+  F +++ F  ++G  FA  +  ++P  
Sbjct: 184 LMDSRTGRAIKAMRASTLMAEAMGVDTLRHKVGIFLIAALFASLSGWLFAHFQRTVNPSP 243

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F     I  + + +LGG   +        +   + +    +      +            
Sbjct: 244 FGLKMGIEYLFMTVLGGAGYVWGAISGAVMTKLLEDELQVLLPKLLGT-------SGSYE 296

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
             +  I L LV+      +  L
Sbjct: 297 VIVFGIVLVLVLKYLPDGVWSL 318


>gi|90423205|ref|YP_531575.1| ABC transporter related [Rhodopseudomonas palustris BisB18]
 gi|90105219|gb|ABD87256.1| ABC transporter related [Rhodopseudomonas palustris BisB18]
          Length = 593

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 75/319 (23%), Positives = 133/319 (41%), Gaps = 30/319 (9%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
             ++           YI ++ +Q   + +  +GLS+V+G  G ++L     +  GAY+  
Sbjct: 31  AAIVVALAATVSFDGYILNILMQATTFAIAVFGLSVVLGLCGQINLAQAAFFGFGAYAVG 90

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           I  + + LS WL +     I+   G ++G  +L+  G YLA+ T+   +I   ++I    
Sbjct: 91  IGTTDFQLSYWLCLAAGCGIALLAGAVLGASTLRLGGHYLAMVTISFQQIVTLVMINAIW 150

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T+G  G+    R     ++                         + M  L    +  L 
Sbjct: 151 LTHGPDGVGRIGRPALFQSSQ------------------AYLAFCVAMLALVGYFVWHLP 192

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            T +  A R +RDN+ A       +   K+ AFA+S+   G+AG  FA     ISPD F 
Sbjct: 193 DTRLGRAMRAVRDNELAAGVAGIDVFRTKVYAFALSAVLGGLAGGLFAGGFSYISPDQFS 252

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F+E+I+ +++ +LGG  S    A  TA+LI + E               F  S    +  
Sbjct: 253 FAESIVFLTMSLLGGGASPIGSAIGTALLILIPEWLR------------FLKSVPGLYLA 300

Query: 323 LMVIALFLVILMRSHSLLR 341
           +  +++ L+I      +  
Sbjct: 301 IYGLSVILIIRFMPDGIWG 319


>gi|256157912|ref|ZP_05455830.1| high-affinity branched-chain amino acid transport system permease
           protein LIVH / high-affinity branched-chain amino acid
           [Brucella ceti M490/95/1]
 gi|256253128|ref|ZP_05458664.1| high-affinity branched-chain amino acid transport system permease
           protein LIVH / high-affinity branched-chain amino acid
           [Brucella ceti B1/94]
 gi|261220233|ref|ZP_05934514.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|265996421|ref|ZP_06108978.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|260918817|gb|EEX85470.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|262550718|gb|EEZ06879.1| conserved hypothetical protein [Brucella ceti M490/95/1]
          Length = 609

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 26/325 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A    L   L L    +  ++  + I I ++   +   +IV G  G +SL   + Y IG
Sbjct: 22  IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  ++    G+S W  + + A I+   GM++  P  + +G + ++A++   E+F+ + 
Sbjct: 82  GYT-GVILFNMGISPWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 140

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + +  +T G  G+ +  +L ++    R                     ++ GM  ++ +I
Sbjct: 141 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 186

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +RR+ +       R+ + A  +     +  +L A A+SSA   M G F A     I 
Sbjct: 187 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 246

Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P  MF  + +I +    ++GG+ +++       +L+ + E            L  F    
Sbjct: 247 PAAMFSLAFSIQIAMFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 302

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 +  + L LV+L   + ++ 
Sbjct: 303 ------VYGLVLILVVLFMPNGIMG 321


>gi|325275615|ref|ZP_08141517.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas sp. TJI-51]
 gi|324099289|gb|EGB97233.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas sp. TJI-51]
          Length = 592

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 68/315 (21%), Positives = 129/315 (40%), Gaps = 25/315 (7%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
            +  +    ++  + I I  Y   A   +IV G  G LSL   + Y  GAY   +L    
Sbjct: 20  IIPFSAGSNFVFHLFILICSYAALASAWNIVGGFAGQLSLGHAVFYGTGAYVSTLLLLHL 79

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           G+S WL + V A++S    +++  P  + RG + A+AT+ + E+ + ++I    +T G A
Sbjct: 80  GMSPWLGMLVGAVVSTVLAVVISWPCFRLRGPFFALATIAVLEVVRLLVINQHDLTGGAA 139

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G+ V  +L       R+                    +  G   ++  +   ++ + +  
Sbjct: 140 GLAVPLKLGAEWMLFRARW--------------PYLLIAFGFLAITLLVSWKIKHSRLGY 185

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DMFKFSENI 267
               +R+ + A  ++    +  KL A A+S+A   + G+F A     I P  MF    +I
Sbjct: 186 YLIAVREREDAAQAVGVNAVKVKLIAVALSAALTSLIGSFHAMYLTFIEPGAMFSLELSI 245

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            +    ++GG+ +LS     T I++ + EL  G              + +  H  +  + 
Sbjct: 246 QIAMFALIGGLGTLSGPLIGTLIVLPLAELARG----------WLGDAGSGVHGLVYGLV 295

Query: 328 LFLVILMRSHSLLRL 342
           L   +L     L+  
Sbjct: 296 LVAFVLTIPQGLVGR 310


>gi|319779233|ref|YP_004130146.1| ABC-type branched-chain amino acid transport systems, ATPase
           component [Taylorella equigenitalis MCE9]
 gi|317109257|gb|ADU92003.1| ABC-type branched-chain amino acid transport systems, ATPase
           component [Taylorella equigenitalis MCE9]
          Length = 597

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 53/325 (16%), Positives = 122/325 (37%), Gaps = 22/325 (6%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +   ++ ++L +      + ++  +    I I  + A GL I+ G  G+ S        I
Sbjct: 4   IFVAIFAIVLVVMPLVPATPEFWINQLNTIGISSLVALGLIILTGIGGMTSFGQAAFMGI 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+   L +  GLS W+ +    +++     I+G  +L+  G +L ++T+ +S +F  +
Sbjct: 64  GAYTSAYLCTALGLSPWIGLLCGLLLASLIAFILGQLTLRLSGHFLGLSTIALSLVFFYL 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
               + +     GI     +   G +     +               +Y++    F    
Sbjct: 124 FGNMEFL-GRHDGIPGIQPISIFGFSFMKARQM--------------FYLIWFCVFAGIL 168

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           + + L  +    A  +++       S        ++ AF  ++ F  +AG  +A  +  I
Sbjct: 169 LSINLLNSRNGRAICSLKHGASMAESFGINTQKYRMVAFVYAAFFAALAGWLYAHEQRAI 228

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP  F  +  I  + + ++GG  S+       A++I + +        + +  +      
Sbjct: 229 SPSAFSLNYGIEYLFMAVIGGSVSIWGAVVGAALVIILRDQIQAYAPLFVDERVNV---- 284

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 +  + + L++      L  
Sbjct: 285 ---EIIVFGVMMILILHFARGGLWP 306


>gi|39998482|ref|NP_954433.1| branched-chain amino acid ABC transporter permease [Geobacter
           sulfurreducens PCA]
 gi|39985429|gb|AAR36783.1| branched-chain amino acid ABC transporter, permease protein
           [Geobacter sulfurreducens PCA]
 gi|298507427|gb|ADI86150.1| branched-chain amino acid ABC transporter, membrane protein
           [Geobacter sulfurreducens KN400]
          Length = 307

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 71/318 (22%), Positives = 132/318 (41%), Gaps = 38/318 (11%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y   + + I I ++ A GL+++ G  G LSL      +IGA++  ++  R GL   
Sbjct: 11  LVDPYTLQILVNIGIAIVLALGLNVITGITGQLSLGHAAFMSIGAFTSAVITLRTGLPFS 70

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +S +I+   G  +G P L+  GDYLAI TL  +EI + + +               
Sbjct: 71  ANLLLSGLITAFVGAAIGYPILRLTGDYLAICTLGFAEIVKVVFLNLDITN--------- 121

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                         +            I M  ++  +  LS   + +++ +    A + I
Sbjct: 122 --------------KALGLSVPPARSPIPMPIIVWVVAILSIIFVCFMKESRFGRALKAI 167

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           RD++ A  ++   I   K+ +FAV S   G+ G  +A     I+P  F F +++ ++S+V
Sbjct: 168 RDDEIAAEAMGINIARYKVQSFAVGSFLAGVGGCLYAHFLSYINPSDFGFLKSVDILSMV 227

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ S++      +IL    E    M+ Y                  +    L  +++
Sbjct: 228 VLGGLGSIAGTVFGASILAAAPEFLRFMSQY---------------RMLVYGGLLVFLMV 272

Query: 334 MRSHSLLRLRTPSNFLER 351
            R + LL     ++ + R
Sbjct: 273 FRPNGLLGGINFTDLVLR 290


>gi|283850319|ref|ZP_06367608.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
 gi|283574345|gb|EFC22316.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
          Length = 348

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 88/307 (28%), Positives = 148/307 (48%), Gaps = 8/307 (2%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y+  + + I++Y++ A GL+I+ G  GLL L  V  Y IGAY+  +L   Y +S W
Sbjct: 24  FRDVYVLHVLVLIMVYMVLAMGLNILPGFCGLLDLGFVGFYGIGAYTAGLLTIHYNMSFW 83

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           +++P++A+     G+++G+P+L+  GDY AI T   SE+    L     +T G  G+   
Sbjct: 84  VIVPLAALNGAFFGILLGVPTLRLVGDYFAIVTFGFSELVVLFLTNEIWLTRGPLGVPGI 143

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             +    T + +L+            E+  YY+ + M  L    +  L  + +  AW  I
Sbjct: 144 APVSLDVTWLATLLGVDERWRYAFRGEVPYYYLAMAMVLLVYIGMRRLEDSRLGRAWLAI 203

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R++  A  S    ++  K+ AFAVS+A   MAGAFFA     ISPDMFKF E+ +V+ +V
Sbjct: 204 REDPMAAASTGVNLLAYKVIAFAVSAAIGAMAGAFFARWTLFISPDMFKFWESFLVLCMV 263

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +++       ILI + E+   +                        + + L++ 
Sbjct: 264 VLGGLGNINGALVGAVILIALGEILRVILPKLG--------LPAETRFLAYGLIMVLIMR 315

Query: 334 MRSHSLL 340
            R   + 
Sbjct: 316 FRPGGIF 322


>gi|331696387|ref|YP_004332626.1| phosphonate-transporting ATPase [Pseudonocardia dioxanivorans
           CB1190]
 gi|326951076|gb|AEA24773.1| Phosphonate-transporting ATPase [Pseudonocardia dioxanivorans
           CB1190]
          Length = 626

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 60/289 (20%), Positives = 110/289 (38%), Gaps = 31/289 (10%)

Query: 53  AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112
               +++ G+ G  S+        G Y+ + +       +      + ++    G+++GL
Sbjct: 66  GASHTLLFGAAGQPSVGHAALLGAGVYAGIAVSRHTTFGMEGEFVAAIVVGALIGVVIGL 125

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
           PSL+    YLAIATL +  + Q I  +W  +T G AG  V+                   
Sbjct: 126 PSLRIGSLYLAIATLALCIVAQQIFFEWTDLTGGGAGTQVSPPK---------------- 169

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
               V   + + Y+ L +  ++      L R     AW  +R +  A  SL  ++ + K+
Sbjct: 170 LFGAVYTPLGLLYIALVVMGIALLFARNLLRGRQGRAWNAVRTSPLAASSLGISLGWQKV 229

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
            AF VS A +G AG  +A + + +SP  F    +I+ + I I+GG   L   A     + 
Sbjct: 230 GAFGVSGAMVGCAGVLYAHAVNYVSPSDFSLELSIVTLVIAIIGGQRYLWGAALGAIFVE 289

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           G+ E+      +                  +      +V++        
Sbjct: 290 GLPEMLRTAGEF---------------RYVIYGAVFVVVMIFFPEGFAG 323


>gi|71909707|ref|YP_287294.1| inner-membrane translocator:ABC transporter related [Dechloromonas
           aromatica RCB]
 gi|71849328|gb|AAZ48824.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
           / amino acid/amide ABC transporter membrane protein 1,
           HAAT family / amino acid/amide ABC transporter membrane
           protein 2, HAAT family [Dechloromonas aromatica RCB]
          Length = 950

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 54/321 (16%), Positives = 121/321 (37%), Gaps = 22/321 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +   +  L +      ++  ++   I +Y + A GL ++ G  GL S        +GAY+
Sbjct: 371 MLAFVAVLGISPLLLPEFTITLLNYIGLYAVVAVGLVLLTGVGGLTSFGQAAFVGLGAYT 430

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
              L + YGLS WL + +   I+ A  + +G  +L+  G YL + T+        +    
Sbjct: 431 TAWLTTVYGLSPWLTLFIGMAITAAVALSLGFITLRMGGHYLPLGTIAWGISLYFLFGNV 490

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +  G  GI     +   G  ++S   F              +Y++  +  L+   I  
Sbjct: 491 EFL-GGHTGITGIPAVSLFGWELKSGREF--------------FYLIWLVVLLAIVSIRN 535

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  + +  A R ++       ++       K+  F +++    ++G  +A  +  ++P  
Sbjct: 536 LLDSRVGRAIRALKGGTVMAEAMGVNTAREKIIIFLIAALLASISGWLYAHLQRFVNPTP 595

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F  ++ I  + + ++GG+  +        ++  + +    +          F        
Sbjct: 596 FALNQGIEYLFMAVVGGIGHVWGAVLGAGVITILKQWLQDLLPQLLGQSGNF-------E 648

Query: 321 TTLMVIALFLVILMRSHSLLR 341
             +  IA+ L++      L  
Sbjct: 649 VIVFGIAMVLILQKARAGLWP 669



 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/256 (11%), Positives = 75/256 (29%), Gaps = 18/256 (7%)

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           ++++   + +A G ++         L +W  + ++ ++    G ++   + +       +
Sbjct: 96  IVNVGIPLLFAAGLFA----MPPTQLPLWTQVVIAMLLVVPLGPMIYRIAFQPLASAPVL 151

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
             LI++      LI    +  G  G                      F  +    +    
Sbjct: 152 VLLIVAVAVHLALIGLGLLFFGAEGWRTPAFTDL------------SFELAGAPLQGQTV 199

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            V++    L   +  +  RT    A R    N+     +    + A    F +++A    
Sbjct: 200 LVVVASALLIIGLYFFFERTIYGKALRATAMNRTGARLMGIPPVLAGKLCFTLAAAIGAF 259

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           +G   A            F   +      I+GG+ S    A    ++  +          
Sbjct: 260 SGILIAPITTI--YYDSGFLIGLKGFVGAIIGGLASYPLAALGAILVGLLESYSSFYASA 317

Query: 305 YFNSLLKFDCSFNMRH 320
           +   ++       +  
Sbjct: 318 FKEVIVFTLIIPVLLW 333


>gi|330826683|ref|YP_004389986.1| monosaccharide-transporting ATPase [Alicycliphilus denitrificans
           K601]
 gi|329312055|gb|AEB86470.1| Monosaccharide-transporting ATPase [Alicycliphilus denitrificans
           K601]
          Length = 604

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 61/308 (19%), Positives = 122/308 (39%), Gaps = 31/308 (10%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               +   +   I +  + A G++++VG  G  SL     +A+GAY+  +L +R+G + W
Sbjct: 25  TDNDFHLRVLFLIGVNYIAAAGMNVLVGYTGQKSLGHAGLFAVGAYTVALLTARWGWNPW 84

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
                + +++G  G+++ LP+L+ +G  LA+ T+    + + I+ +W+ +  G+ GIY  
Sbjct: 85  PAFVAAGVMAGIFGVVIALPALRVKGPALAMVTIGFGIVVEKIVSEWQDVFAGQQGIYGV 144

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             L   GT   S                   + +L +      ++  L R     A+  +
Sbjct: 145 LPLSLGGTMFSSKQW---------------VWFVLLLGVALHVMLRLLLRGRFGRAFMAV 189

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
              + A  S+  ++   K+ AF +S+   G+AGA  A     I+ D   F+ +I ++ +V
Sbjct: 190 NTAEVAAESVGISVYRFKVLAFVISAVTCGLAGALIAQQNQYINSDFITFNLSIFILLMV 249

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           + GG  S+        +L  +                     +           L   + 
Sbjct: 250 LFGGH-SVYGPLLGAVVLTLLDSFLSR---------------WPGVQHFTYGALLLFALY 293

Query: 334 MRSHSLLR 341
                L  
Sbjct: 294 AMPDGLAG 301


>gi|291297024|ref|YP_003508422.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
 gi|290471983|gb|ADD29402.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
          Length = 477

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 89/373 (23%), Positives = 158/373 (42%), Gaps = 36/373 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  +A+   +L      A  +  ++  +GIQI I+   A GL++VVG  GLL L     +
Sbjct: 94  LVRVALGAAILFIAVPIAGLTNSFLFELGIQIGIFAALALGLNVVVGQAGLLDLGFAAFF 153

Query: 75  AIGAYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           AIGAY++ I GS                G  ++L + ++ + +   G+++GLP+L+ RGD
Sbjct: 154 AIGAYTWGIFGSPQAAQFIPGYPSEGLPGNYLYLFMALAVITAAITGVLIGLPALRLRGD 213

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR--------LYFLGTTVRSLIRFFRF 172
           YLAI TL + E+ +          N   G              L      + +   + R 
Sbjct: 214 YLAIVTLGLGEVVRVFANNLDKPLNITNGPQGITPVNRPEVGPLTEFLRAIGAERLYGRP 273

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
               + Y  F Y ++L +  +   + + L  +    AW  IR+++ A  ++   ++  KL
Sbjct: 274 IDEPIAYAFFFYLLVLVVIGIVVLVNIRLANSRFGRAWVAIREDEIAAKAMGIPLLPTKL 333

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
            AFA  +AF G  GA FAA +  +SP+ F    +I +++ VILGGM S+       A + 
Sbjct: 334 LAFATGAAFSGAMGAIFAAKQTFVSPESFTLQASINILAFVILGGMGSIGGAVVGAAAVT 393

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHT--------------TLMVIALFLVILMRSHS 338
            +            N+  +   +    +                +  + L L+++ R   
Sbjct: 394 VLNIGILKDFSDLLNTWRQTGVTILGYNMANLPPQLNPAKYERLVFGLILILMMIFRPEG 453

Query: 339 LLRLRTPSNFLER 351
           L+  +     L+ 
Sbjct: 454 LIPEQRHRAELQE 466


>gi|319764467|ref|YP_004128404.1| abc transporter related protein [Alicycliphilus denitrificans BC]
 gi|317119028|gb|ADV01517.1| ABC transporter related protein [Alicycliphilus denitrificans BC]
          Length = 604

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 61/308 (19%), Positives = 122/308 (39%), Gaps = 31/308 (10%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               +   +   I +  + A G++++VG  G  SL     +A+GAY+  +L +R+G + W
Sbjct: 25  TDNDFHLRVLFLIGVNYIAAAGMNVLVGYTGQKSLGHAGLFAVGAYTVALLTARWGWNPW 84

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
                + +++G  G+++ LP+L+ +G  LA+ T+    + + I+ +W+ +  G+ GIY  
Sbjct: 85  PAFVAAGVMAGIFGVVIALPALRVKGPALAMVTIGFGIVVEKIVSEWQDVFAGQQGIYGV 144

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             L   GT   S                   + +L +      ++  L R     A+  +
Sbjct: 145 LPLSLGGTMFSSKQW---------------VWFVLLLGVALHVMLRLLLRGRFGRAFMAV 189

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
              + A  S+  ++   K+ AF +S+   G+AGA  A     I+ D   F+ +I ++ +V
Sbjct: 190 NTAEVAAESVGISVYRFKVLAFVISAVTCGLAGALIAQQNQYINSDFITFNLSIFILLMV 249

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           + GG  S+        +L  +                     +           L   + 
Sbjct: 250 LFGGH-SVYGPLLGAVVLTLLDSFLSR---------------WPGVQHFTYGALLLFALY 293

Query: 334 MRSHSLLR 341
                L  
Sbjct: 294 AMPDGLAG 301


>gi|119387518|ref|YP_918552.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119378093|gb|ABL72856.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 319

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 70/324 (21%), Positives = 125/324 (38%), Gaps = 24/324 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             ++    L           Y   +G  I +  +   G+ I+ G  G +SL       IG
Sbjct: 9   ATLLVLAALIAVTPFFFPSGYYYRVGALIFVNGLAVTGIVILTGYAGQISLGHAGFAGIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  +  +  GL   L + + A ISG    ++G P L+ +G YLA+ATL    +   +L
Sbjct: 69  GYACALAPTHLGLHPSLAVVLGAAISGVLAYLVGRPILRLKGYYLAVATLGFGILVSMVL 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
              + +T G  GI V +           L               F Y+       + A I
Sbjct: 129 NNERQLTGGPDGIAVPELGLRGLLKDWGLDLTNGQ---------FWYFFCGIALLIGAWI 179

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L L ++    A R +  ++ A  ++   +   KL AF +S+ +  +AG+  A     I+
Sbjct: 180 ALNLHQSPSGRALRALHGSEIAAGTVGIDVARVKLQAFVISAVYASVAGSLVALQNKFIT 239

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           PD+  F  +I ++++ +LGG  S+        IL  + +       Y             
Sbjct: 240 PDVAGFMHSIEMVTMAVLGGAGSVLGAIFGAGILTLLPQALTVFAEY------------- 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                ++ + + LV++     LL 
Sbjct: 287 --EQLVLGLVMMLVMIFLREGLLP 308


>gi|265993180|ref|ZP_06105737.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|262764050|gb|EEZ10082.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
          Length = 609

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 26/325 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A    L   L L    +  ++  + I I ++   +   +IV G  G +SL   + Y IG
Sbjct: 22  IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  ++    G+S W  + + A I+   GM++  P  + +G + ++A++   E+F+ + 
Sbjct: 82  GYT-GVILFNMGISPWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 140

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + +  +T G  G+ +  +L ++    R                     ++ GM  ++ +I
Sbjct: 141 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 186

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +RR+ +       R+ + A  +     +  +L A A+SSA   M G F A     I 
Sbjct: 187 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 246

Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P  MF  + +I +    ++GG+ +++       +L+ + E            L  F    
Sbjct: 247 PAAMFSLAFSIQIAMFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 302

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 +  + L LV+L   + ++ 
Sbjct: 303 ------VYGLVLILVVLFMPNGIMG 321


>gi|197301482|ref|ZP_03166561.1| hypothetical protein RUMLAC_00214 [Ruminococcus lactaris ATCC
           29176]
 gi|197299442|gb|EDY33963.1| hypothetical protein RUMLAC_00214 [Ruminococcus lactaris ATCC
           29176]
          Length = 362

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 74/337 (21%), Positives = 138/337 (40%), Gaps = 24/337 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  K + I   + ++  +++ + + A      +  + + +  Y++ A  L++VVG LG L
Sbjct: 10  KTTKNNLITYAMVILAFVIMQILISAGSISSLLQGLMVPLCTYIILAVSLNLVVGILGEL 69

Query: 67  SLNCVIAYAIGAYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           SL       +GA++                   +L + +  + +   GM++G+P L+ +G
Sbjct: 70  SLGHAGFMCVGAFTSAFFSKCTRDVIASDGLRFFLALLIGIVTAAIFGMLIGIPVLRLKG 129

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           DYLAI TL   EI +N++       + K        +  L       +            
Sbjct: 130 DYLAIVTLAFGEIIKNMVNVLYIGKDSKGFHVTTKDVMALNMDADGTVILNGPQGITGTP 189

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
           +   + +   +  L+  I+  L  +    A   IRDN+ A  S+   I   KL AF +S+
Sbjct: 190 KNSTFVIGFILILLTLFIVQNLINSRDGRAIMAIRDNRIAAESIGINITKYKLMAFTISA 249

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSEN--IIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           A  G AG  +A +   ++ +   F  N  I ++  V+LGG+ ++     A  IL  + EL
Sbjct: 250 AMAGAAGVLYAHNISTLTANTNNFGYNMSITILVFVVLGGIGNIRGSIIAAVILTLLPEL 309

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
             GM  Y                  +  I L +++L 
Sbjct: 310 LRGMKDY---------------RMLIYAIVLIVMMLF 331


>gi|163743367|ref|ZP_02150747.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161383361|gb|EDQ07750.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
          Length = 672

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 100/311 (32%), Gaps = 26/311 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLI 96
                   IY + A GL+I  G +G++++       +GAY+  ++          I + I
Sbjct: 383 LDAISLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVIQLVIPDHTLSILVAI 442

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P +  ++   G+ M    +++  +      L+ +      L +      G     +    
Sbjct: 443 PAAFAVTFGAGIAMERLVIRWLYNRPLET-LLATFGISIALQQLAKNIFGTQARPLTAP- 500

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     +      +  V        + +      A ++  +RRT +    R +  N
Sbjct: 501 --------GWLDGAWIVNDVVSISYIRIAIFVLALGFLALLLFIIRRTRLGLETRAVTQN 552

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +    S+        +  F + S   G+AG          S     +         V++G
Sbjct: 553 RSMAASMGINPDRVNMLTFGLGSGIAGIAGVAIGLFAKVTSELGNDYIVQS--FMTVVVG 610

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        ++    +    +N            S  +   T M++ + + I  R 
Sbjct: 611 GVGSIWGTLAGAVMIGFSQKGIEWLNP-----------SNTLAAQTYMIVLIIIFIQFRP 659

Query: 337 HSLLRLRTPSN 347
             ++ LR  + 
Sbjct: 660 RGIVALRGRAA 670


>gi|242309182|ref|ZP_04808337.1| abc transport system permease protein [Helicobacter pullorum MIT
           98-5489]
 gi|239524223|gb|EEQ64089.1| abc transport system permease protein [Helicobacter pullorum MIT
           98-5489]
          Length = 399

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 71/371 (19%), Positives = 136/371 (36%), Gaps = 38/371 (10%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +   +++ LFL       Y   +   ILI+V+ A   +++ G  G LSL      AIG
Sbjct: 21  LLLYIGVIIVLFLAQCFLNDYALRIFNNILIFVILAVSYNLINGVTGQLSLEPNGFVAIG 80

Query: 78  AYSYVIL-------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           AY   ++                          +   +  S +++    +++  P  + R
Sbjct: 81  AYITALMLLDEDLKLGMFELAEPHPFVLSMYSELLPALLCSGVVAALIAILLAFPVFRVR 140

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR------------------LYFLG 160
           GDYLAI TL    I + + I     TNG  G+                          L 
Sbjct: 141 GDYLAIVTLGFGFIIKILAINNPQWTNGAIGLNEIPNNADSVVGGIQNFLKGLLDSQSLP 200

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             +++ + F    S      I + +    +   +  +IL +  +    A + +RD++ A 
Sbjct: 201 EFLKNPLNFVYTHSFENGANITVLFWSGIIATAAVILILQIVYSKYGRAMKAVRDDEDAA 260

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++       K  AF+ S+   G+ G   A     I P +F F     ++ I++LGG+ S
Sbjct: 261 IAMGINTFKIKTFAFSTSAFLEGVGGGLMAVLLTTIDPKIFGFELTFQLLIIIVLGGLGS 320

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
            +     T ++IG  E    ++         F  ++         + L +++L     ++
Sbjct: 321 TTGAIVGTILVIGGGEWLRFLDQPLVFFGQDFG-AYPGLRMVFFSLILLVIMLFAREGIM 379

Query: 341 RLRTPSNFLER 351
             +   +   R
Sbjct: 380 GKKELWDLKPR 390


>gi|300865987|ref|ZP_07110721.1| putative Inner-membrane translocator [Oscillatoria sp. PCC 6506]
 gi|300335978|emb|CBN55879.1| putative Inner-membrane translocator [Oscillatoria sp. PCC 6506]
          Length = 521

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 88/377 (23%), Positives = 158/377 (41%), Gaps = 41/377 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  L  +  +L+        ++    +  +QI I+++ A GL+I VG  GLL L     +
Sbjct: 129 LATLVTLAFILISFPFVDAAAKTEWIATVVQIQIFIILALGLNIPVGFAGLLDLGYAAFF 188

Query: 75  AIGAYSYVILGS---RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           AIGAY+  +L S       + W+++P++A+++   G+I+G P+L+ RGDYLAI TL   E
Sbjct: 189 AIGAYTTGLLSSPQLNLYWNFWVVLPIAALVAAIAGVILGTPTLRLRGDYLAIVTLGFGE 248

Query: 132 IFQNILIKWKPIT---------NGKAGIYVAD------------RLYFLGTTVRSLIRFF 170
           I   +      +              G                      G          
Sbjct: 249 IIPVVFRNLTSVRIEEPISKLLGSIFGHPEIAICFLGCEQPLNLTGGEAGINPIGRPFLP 308

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
              +         YY++L +   S  +I  LR + +  AW  +R+++ A  ++   ++  
Sbjct: 309 IVGTFSAGNYYPWYYLILCLVVFSYFMISRLRDSRLGRAWAAMREDELAASAMGINLVKT 368

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           KLSAFA+ + F G AGAF+AA    I P +F FS ++I++ +VILGG+ ++S +   + I
Sbjct: 369 KLSAFAMGATFSGFAGAFYAAYISAIFPSVFDFSVSVIILCMVILGGLGNMSGVILGSII 428

Query: 291 LI-----------------GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ++                     +   +        L            L  + L ++++
Sbjct: 429 IMSADRLYLPQLAQILKGFLNTSVLPNITSPELRDFLATSLDPIQLRLFLFGLTLVVMMI 488

Query: 334 MRSHSLLRLRTPSNFLE 350
           +R   L+  +     L 
Sbjct: 489 VRPEGLIPDKVHQAELH 505


>gi|284031015|ref|YP_003380946.1| inner-membrane translocator [Kribbella flavida DSM 17836]
 gi|283810308|gb|ADB32147.1| inner-membrane translocator [Kribbella flavida DSM 17836]
          Length = 561

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 76/343 (22%), Positives = 132/343 (38%), Gaps = 23/343 (6%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L +    + F F           S+  Q+LI+   A GL+IVVG  GLL L  +     
Sbjct: 216 VLTLAAFAVAFFFPFTQNGSDANMSIATQVLIFAATAMGLNIVVGLAGLLDLGYIAFLGS 275

Query: 77  GAYSYVI------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           GAY   +          +      ++ + A ++   G+I+G P+L+  GDYLAI TL   
Sbjct: 276 GAYVAAMLSESAFATIDWHPPFLAVVLIGACVAATLGLIIGSPTLRVSGDYLAIVTLGFG 335

Query: 131 EIFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           EIF+  ++    I       G      +  L     +           +      Y++LL
Sbjct: 336 EIFRLAMLNLDGINGPLLTNGPNGIPGIPELQVGGFNFGDEHTVLGLELGRFANYYFLLL 395

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +      +   L  + I   W  IR+++KA  ++   +   KL AFA+ +   G+AG  
Sbjct: 396 ILIAFVILVFARLNDSRIGRGWIAIREDEKAAEAMGVNVFGLKLLAFAIGAFLAGLAGTI 455

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            A     +SPD + F E+  +++ ++LGGM +++ +     IL  + E     + Y    
Sbjct: 456 KAHQDVAVSPDQYIFLESAFLLAAIVLGGMGTIAGVLLGATILKLLPEKLRFFSEYRLLL 515

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                                 ++  R   L+  R        
Sbjct: 516 FGLLLVL---------------MMRFRPEGLVASRRRQLEFHE 543


>gi|317123161|ref|YP_004103164.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Thermaerobacter marianensis DSM 12885]
 gi|315593141|gb|ADU52437.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Thermaerobacter marianensis DSM 12885]
          Length = 361

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 76/332 (22%), Positives = 134/332 (40%), Gaps = 21/332 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             L   V   L  L L      +Y+  +  Q  IYV+ A  L++++G  G LS+      
Sbjct: 25  WLLQLAVIVGLYQLLLAWAGGNRYLLVVLTQAGIYVIMAVSLNLILGYTGQLSIGHAGFM 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GAY+  IL   + +   + +    +++GA G+++G+PSL+ RGDYLAIATL   EI  
Sbjct: 85  AVGAYAAAILTKFFDVPFPVALAAGGLLAGAAGLLVGIPSLRLRGDYLAIATLGFGEIIS 144

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +L     +  G                   +I          I     +    G+  L+
Sbjct: 145 VLLSLINEVPVGTR-----------------VIDVGGAQGLIAIPRHTTFAWTYGVAVLA 187

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             ++     +    A   IR+++ A  ++       K+ AF + +   G+AG   A    
Sbjct: 188 VKLVWHFVHSTHGRACIAIREDEVAAEAMGIPSTRYKVMAFTIGALLAGVAGGLHAHQYL 247

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P +  F  ++ ++ IV++GGM S +    A      V +        +  +      
Sbjct: 248 YLNPALAGFMNSVFILVIVVIGGMGSTTGAVLAAVFFTYVNQAL----PNWMQAAHLPSN 303

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                   L  + L LV+L+R   LL     +
Sbjct: 304 IAPAVRMVLFSVLLILVMLVRPRGLLGGVELT 335


>gi|226310202|ref|YP_002770096.1| branched-chain amino acid ABC transporter permease [Brevibacillus
           brevis NBRC 100599]
 gi|226093150|dbj|BAH41592.1| probable branched-chain amino acid ABC transporter permease
           [Brevibacillus brevis NBRC 100599]
          Length = 427

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 148/352 (42%), Gaps = 31/352 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A+   +LL +        +Y   +  Q+ IYV  A GL+IVVG  GLL L  V  +A G
Sbjct: 59  MAIGAIVLLLIIPLVAGENRYYMEVASQVGIYVAMALGLNIVVGFAGLLDLGYVAFFAAG 118

Query: 78  AYSYVILGSRYGL-------------SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           AY+Y I  +                   W  + V  +++   G+++GLP L+ +GDYLAI
Sbjct: 119 AYAYAIFSTSQANEFIAGNLFPLSGEWFWPFLIVGLIVAAVFGILLGLPVLRVKGDYLAI 178

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL   EI + +        N   G      +                    +    + Y
Sbjct: 179 VTLGFGEIIRIVFNNLDKPINITNGPQGITPIPSPELF-----------GIKMGTPFYFY 227

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           +++L +        +    + +  AW  +R+++ A  S+  +++  KL+AFA+ ++F G+
Sbjct: 228 FIVLFVIAFIVLANIRFEHSRLGRAWIAVREDELAAQSMGISLLNTKLAAFALGASFAGV 287

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            G  FAA +  I P  F   E+I ++ +VILGG  S+  +    A +  +          
Sbjct: 288 VGVIFAAKQTFIDPTSFTLMESIGILVMVILGGSGSIPGVVLGAAFVTILQVQLLKEFSN 347

Query: 305 YFNSL-------LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
           + +SL       L      +     +  I L LV L R + L+  +   N L
Sbjct: 348 FLHSLQNSGIISLPNQLDPSKFQRLIFGIMLILVALYRPNGLIPAKRKKNDL 399


>gi|218886577|ref|YP_002435898.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218757531|gb|ACL08430.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 360

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 61/303 (20%), Positives = 126/303 (41%), Gaps = 29/303 (9%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y  ++   + + ++   GL++++G  G +S      + +GAY   IL + +G+  WL 
Sbjct: 55  SGYQFTVLNVVAVNLIVVTGLNLLMGYAGQISYGHAAFFGMGAYGSAILSATHGVDPWLA 114

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + VSA        ++G+P+L+ +G+YL +ATL  + I   IL++W  +T G +G      
Sbjct: 115 MGVSACGVAVAAAVVGVPTLRLKGNYLVMATLGFNLIVDVILVQWSEVTGGSSGFVGVPP 174

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           L   G +  +   F              Y++  G+  L       L  + +  A R I D
Sbjct: 175 LAVAGISFDTDRSF--------------YWLAWGVALLLLIPARNLVHSPVGRALRAIHD 220

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++    +        K+  F +S+ F  +AG+  A     ++P  F   +++  +++ ++
Sbjct: 221 SEPGAEACGVPTASYKVQVFVLSAVFASLAGSLHAHYLGIVAPKTFDIFKSVEFVTMCLI 280

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM SL        +L  + ++      +               H  +    L ++++  
Sbjct: 281 GGMGSLWGGLAGALLLTVLPQMLGVFEEH---------------HDLIFGAILLVMLIFM 325

Query: 336 SHS 338
              
Sbjct: 326 PRG 328


>gi|291458417|ref|ZP_06597807.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418950|gb|EFE92669.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 343

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 84/326 (25%), Positives = 142/326 (43%), Gaps = 28/326 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L  +   +  L L       Y  ++  +I  Y++   GL+++ G  GL+SL      AIG
Sbjct: 25  LLWIILTVFLLMLPFVFRNPYFLTVVAKIGCYIILGLGLNLLTGYTGLVSLGHAGFVAIG 84

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  +L  + G   +  +    + +   G +MGLP+L+  G YL+I TL   EI + +L
Sbjct: 85  AYTASLLSVKAGCPFFPSMLAGMLAAALIGALMGLPTLRVTGTYLSIITLGFGEIVKMVL 144

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + W+ +TNG  G+    +    G  + +                  Y+++L M  L +  
Sbjct: 145 MNWQSVTNGTLGVKNIPKPQIFGWKLTTANHGM-------------YFLILFMIVLISLF 191

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L R+    A R IR+++ A   +   +   K+ AF +S+    + GA +A+    I 
Sbjct: 192 CRSLMRSKTGRALRAIREDEMASTMMGIPVTAYKILAFVLSAVICALGGALYASLIGYID 251

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F F  + +++SIVILGGM +L  I     +LI   EL   +  Y             
Sbjct: 252 PNTFNFDVSTLILSIVILGGMGTLRGIYVGAIVLIAFPELSRSLMKY------------- 298

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLR 343
                L    L L++  R   +L  R
Sbjct: 299 --RFVLYGAILVLMMRFRPSGILGWR 322


>gi|328544138|ref|YP_004304247.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter permease [polymorphum gilvum SL003B-26A1]
 gi|326413881|gb|ADZ70944.1| Branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 347

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 83/318 (26%), Positives = 140/318 (44%), Gaps = 15/318 (4%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L + L L       Y   +   + I V  A GL+I+ G  GL+SL      A+GAY+  
Sbjct: 28  VLAVGLALAPLVLDNYWLYLACFVAINVASATGLNILTGFTGLVSLGQAAFMAVGAYTVA 87

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +L  R G    L +  +  ++   G+++GLPSL+ +G YLAIAT+  S I   + + W+ 
Sbjct: 88  VLEIRIGTPFLLNLVAAGAVAALIGVVVGLPSLRVKGLYLAIATIAASFILHFVFVNWQT 147

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +TNG +G+ V                   F  + +   + +YYV + +  L       L 
Sbjct: 148 VTNGNSGLSVPPA---------------TFLGTPLTDYVQLYYVFVPITALMVLGAANLF 192

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           RT I  A+  IRD   +   L  +++  KL +FAVSS + G+AG  +A     ++P+ F 
Sbjct: 193 RTRIGRAFIAIRDRDISAEVLGISLLRYKLMSFAVSSFYAGLAGGMWAYFFRVVTPESFP 252

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  +I  ++ +I+GGM ++         +  V EL   +       L       +   T 
Sbjct: 253 FVYSIFFLAAIIVGGMGTILGGILGAVFMTLVPELLRFVVDILSPVLPNAGTLLSPVRTI 312

Query: 323 LMVIALFLVILMRSHSLL 340
           +    +   ++     L 
Sbjct: 313 VFGALIIGFLVFEPKGLA 330


>gi|160937947|ref|ZP_02085305.1| hypothetical protein CLOBOL_02841 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439173|gb|EDP16927.1| hypothetical protein CLOBOL_02841 [Clostridium bolteae ATCC
           BAA-613]
          Length = 371

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 64/341 (18%), Positives = 122/341 (35%), Gaps = 4/341 (1%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +  NK      +  V+    L      T    Y  S+  +  IY + A  ++++ G  GL
Sbjct: 4   MTKNKNKLYTLIALVIIIGFLAFLQSDTAEYSYQISILERSAIYAVVAVSMNLLTGFTGL 63

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
            SL      AIGAY   I     G      +   + IS     I     +      LA A
Sbjct: 64  FSLGQAGFMAIGAYVVAIFTIPVGSR--ASVYYVSGISPVIANIQLPIPVALLLGGLAAA 121

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            +        + +K   +     G     R +       ++           I      +
Sbjct: 122 AMAALIGIPVLRLKSDYLAIATLGFSEIIRAFIAAPMFDTITN--GSYGLKSIPGFPNIF 179

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            + G+  L  ++++ L  ++   A+++IR+++ A  S+   +   K  +F +SS F G+ 
Sbjct: 180 AVFGLAALCIALMVLLINSSYGRAFKSIREDEVAAQSMGINLFHYKELSFVISSFFTGVG 239

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G   A     I    F+ +    ++ IV+LGG+ S++       ++    EL    +   
Sbjct: 240 GGMLAMFMRSIDSKTFQVALTYDILLIVVLGGIGSVTGSVAGAFLVTAGRELLRFFDDPL 299

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
             + +      +     +  I L  V+L  S  ++     S
Sbjct: 300 TIAGVSVPLFRSGFRMVIFSILLMAVVLFYSRGIMGNHEFS 340


>gi|225389470|ref|ZP_03759194.1| hypothetical protein CLOSTASPAR_03218 [Clostridium asparagiforme
           DSM 15981]
 gi|225044464|gb|EEG54710.1| hypothetical protein CLOSTASPAR_03218 [Clostridium asparagiforme
           DSM 15981]
          Length = 328

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 75/306 (24%), Positives = 132/306 (43%), Gaps = 29/306 (9%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y+  + I+IL+Y M A  L+++ G  G ++L     Y IG+Y+  IL  +Y +    L
Sbjct: 29  SSYLLGILIRILLYTMLAGSLNMINGYSGQMNLGHAGLYCIGSYTAGILAVKYQVGFLPL 88

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + +S  ++   G ++ LP++K  G YLAI T+  SEI + + + W  +T G  GI    R
Sbjct: 89  LFISGFVTALFGFLVSLPTIKLAGVYLAIVTIGFSEITRLVALNWTGLTGGPMGIKGIPR 148

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
               G  +   + F              YY+ L +  L   ++  +  + I  AW  IR+
Sbjct: 149 PEIFGLRLSEPVHF--------------YYLALVLAVLVLFMMRRVVSSRIGRAWIAIRE 194

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +Q A   L       K   F+  +   G+AG F A     IS DMF   E   ++++VI+
Sbjct: 195 DQVAASFLGVNTRRFKSLNFSFGAFIAGVAGCFAAYYYQFISSDMFSMDEGFNILAMVII 254

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  +L      + ++  + E+      Y                  +  + + +++  R
Sbjct: 255 GGQGTLIGPVAGSLVVNTITEVFRFAADY---------------RMVMYAVLIIVMMWFR 299

Query: 336 SHSLLR 341
              L+ 
Sbjct: 300 PQGLVG 305


>gi|311695771|gb|ADP98644.1| urea ABC transporter, permease protein UrtB [marine bacterium HP15]
          Length = 532

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 98/306 (32%), Gaps = 21/306 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+ A GL+I  G +G++++       +GAY+   +   +     L + +S   
Sbjct: 247 LSLGSVLVLAAIGLAITFGVMGVINMAHGELIMLGAYTTWGMQQLFPGQPGLALILSIPA 306

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                   G+   +    YL    L      + +L  +      +  +            
Sbjct: 307 GFLVAATAGIIIERSVIQYLKGRPL------ETLLATFGISLILQQLVRTVISPQNRTVV 360

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +      +  +   +   YVL     + A ++L +R+T +    R +  N+    S
Sbjct: 361 TPDWMSGSLVINDALSLTLNRLYVLAFALIVFAGLMLIMRKTRLGLEVRAVTQNRAMARS 420

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +        +  FA+ S   G+AG   +   +         +  I    +V+ GG+ +L 
Sbjct: 421 MGIRATRVDIMTFALGSGVAGLAGVALSQLTNV--GPNLGQNYIIDSFMVVVFGGVGNLW 478

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L  + +L                         ++++ + L I  R   L   
Sbjct: 479 GTLIAGLSLGTINQLLEPWAGAVLAK-------------IIVLVFIILFIQKRPKGLFPQ 525

Query: 343 RTPSNF 348
           +  +  
Sbjct: 526 KGRAAE 531


>gi|78355657|ref|YP_387106.1| high-affinity branched-chain amino acid ABC transporter permease
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
 gi|78218062|gb|ABB37411.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 389

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 89/266 (33%), Positives = 137/266 (51%), Gaps = 11/266 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
            A    +L    +       Y  ++ I  L+YV+   GL+IVVG  G+L L     YAIG
Sbjct: 90  AAFYCAVLGLGIVLPWLVSTYQTNIMISFLLYVILGLGLNIVVGVAGMLFLGYAAFYAIG 149

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYSY +L + +GL  W ++PV  +++ A G+ +  P L+ RGDYLAI TL   EI + +L
Sbjct: 150 AYSYALLNTYFGLGFWTVLPVGGILAAAAGVALAFPVLRLRGDYLAIVTLGFGEIVRLVL 209

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
             W   T G +GI    R              F          I++YY++L M  L+ + 
Sbjct: 210 ENWSDFTQGPSGISNIPRPS-----------LFGAELGVAETGIYIYYIVLVMAVLTVAA 258

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  ++ + I  A + +R+++ A  ++    +  KL+AF V +A+ G AG  FAA    I+
Sbjct: 259 VQRIKDSRIGRALQALREDEIACQAMGIDRVNVKLTAFGVGTAWAGFAGVIFAAKTTFIN 318

Query: 258 PDMFKFSENIIVISIVILGGMTSLSK 283
           P  F F E+ I++SIV+LGGM S   
Sbjct: 319 PASFTFMESAIILSIVVLGGMGSRRG 344


>gi|225386521|ref|ZP_03756285.1| hypothetical protein CLOSTASPAR_00268 [Clostridium asparagiforme
           DSM 15981]
 gi|225047380|gb|EEG57626.1| hypothetical protein CLOSTASPAR_00268 [Clostridium asparagiforme
           DSM 15981]
          Length = 291

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 68/311 (21%), Positives = 124/311 (39%), Gaps = 38/311 (12%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y   +     IY++   G+SI+ G  GL S+      AIGAY+  ++   + + I + +
Sbjct: 2   NYWMGVATLTGIYMIAILGVSILTGFTGLFSMGHAGFMAIGAYTSALITKTFHVPILVGV 61

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               + +   G+I+G P+LK +GDY  IATL + E+ + I+     +T G  G+    + 
Sbjct: 62  FCGMLTALVIGLIIGYPTLKLKGDYFVIATLGIGEVTKLIIENMPNLTGGARGLTDVPKG 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                        V+L    +    +    R+        +R+ 
Sbjct: 122 ATFP-------------------------VVLCFLVVIVWGLRNFLRSKHGRNCIAVREE 156

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  S+   +   K+ A  +S A  G++GA  A     ++P MF   ++  ++  VILG
Sbjct: 157 ELATASIGANVANYKMLAMGISCALCGISGALLAHYMHYLNPTMFNMVKSDELVMTVILG 216

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  SL+    A+ IL+ + E+                 S          + + LVI+ + 
Sbjct: 217 GCGSLTGTIVASMILVPLPEILRF-------------GSVQEWRMVFYGLLVVLVIIFKP 263

Query: 337 HSLLRLRTPSN 347
             L+  +  S 
Sbjct: 264 SGLMGTKEFSI 274


>gi|313114339|ref|ZP_07799872.1| amino acid or sugar ABC transport system, permease protein
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310623333|gb|EFQ06755.1| amino acid or sugar ABC transport system, permease protein
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 343

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 73/340 (21%), Positives = 135/340 (39%), Gaps = 39/340 (11%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             ++  + V    +   FL       Y + + + + I ++ A  L++  G LG L L   
Sbjct: 15  RYLMNAVLVALLFVGLSFLTQNVLSTYQNKVLLTVGINIILAVSLNVATGYLGQLPLGHA 74

Query: 72  IAYAIGAYSYVILGSRYGLS----IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
              A+GAY+  +      L       + + ++ +++G  G+++G+P+L+  GDYLAI TL
Sbjct: 75  GFMAVGAYTCALFTKYSNLPSGIAFVVGLVLACIVAGLFGVLIGIPALRLTGDYLAILTL 134

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              EI +  L     +                         F+       I +   +  +
Sbjct: 135 GFGEIIRITLNNIDDVLG--------------------FKLFYGAKGLKNIPKYSNFANV 174

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++   I  + ++    A   IRDN+ A  S      + K+ AFA S+AF G+AG 
Sbjct: 175 FICVVITCFAIHAMMKSRHGRAVLAIRDNEIAAESCGIQTTYYKVMAFAFSAAFAGLAGG 234

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A     + P  F F ++I ++ +V+LGGM S+     +  +L  + E     + Y   
Sbjct: 235 LYACYLGVLDPSTFGFMKSIEILVMVVLGGMGSMLGSILSATVLTILPEATRSFDSY--- 291

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  + L L+++ R   LL     S 
Sbjct: 292 ------------RMVVYSLVLVLMMIFRPGGLLGSYDFSM 319


>gi|296272594|ref|YP_003655225.1| urea ABC transporter permease UrtB [Arcobacter nitrofigilis DSM
           7299]
 gi|296096768|gb|ADG92718.1| urea ABC transporter, permease protein UrtB [Arcobacter
           nitrofigilis DSM 7299]
          Length = 531

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 97/303 (32%), Gaps = 21/303 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++ A GL+I  G + ++++       IGAY+   +   +   I   + ++   
Sbjct: 246 LSMGSVLLLAAIGLAITFGVMKVINMAHGELIMIGAYTTYTIQQLFPNLIEYSVIIAVPC 305

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     I+G+   +    +L    L      + +L  +      +  +            
Sbjct: 306 AFIVSGIVGILIERLVIRHLYGRPL------ETLLATFGVSLILQQLVRTIYSPLNQEVK 359

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             S +      +S +       Y+++    +  +I+  +++T++    R +  N+    +
Sbjct: 360 TPSWMSGAWEVNSSLFLTYNRLYIVIFSVMVFLAILYVMKKTSLGLKVRAVSQNRPIARA 419

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +     F   + F + S   G+AG   +   +         +  +    +V+ GG+ +L 
Sbjct: 420 MGIKSSFIDAATFGIGSGIAGVAGVALSQLTNV--GPNLGQAYIVDSFMVVVFGGVGNLW 477

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L  + +    ++      ++                        R   L   
Sbjct: 478 GTLIAALTLGEINKFIEPISGAVLAKVIILVFIILFIQK-------------RPRGLFPQ 524

Query: 343 RTP 345
           +  
Sbjct: 525 KGR 527


>gi|289643428|ref|ZP_06475548.1| inner-membrane translocator [Frankia symbiont of Datisca glomerata]
 gi|289506758|gb|EFD27737.1| inner-membrane translocator [Frankia symbiont of Datisca glomerata]
          Length = 434

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 84/318 (26%), Positives = 137/318 (43%), Gaps = 31/318 (9%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI--------LGSRYGLSI 92
           SM   I IY + A GL++VVG  GLL L  +  +AIGAY              + + L+ 
Sbjct: 118 SMVNDIGIYALLALGLNVVVGYAGLLDLGYIAFFAIGAYVTAYFSSSSAMPWHAPFILNP 177

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           + + P++ +++   G+I+G P+L+ RGDYLAI TL   EI Q +      ITNG  G++ 
Sbjct: 178 FFVFPIALLLAALAGVILGAPTLRLRGDYLAIVTLGFGEIIQLLANNSDEITNGSRGVFG 237

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
              L          +        + I  +  YY+LLG+  +       L R+ I  AW  
Sbjct: 238 VPHLS---------VDLPGIHYQWGIDPLPYYYLLLGIVAIVMIAFGRLERSRIGRAWAA 288

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           IR+++ A  +     +  KL AFA+ ++  G AG   A  +   +P  F    + +V+++
Sbjct: 289 IREDEIAAEATGVPTLRMKLLAFAIGASVSGFAGVLLATKQFF-NPQSFSLQLSFLVVAV 347

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           VI GGM S         +L G+                  D              + +++
Sbjct: 348 VIFGGMGSRLGAVMGAVVLQGLAFYLR-------------DKVPPTDRYIYFGAVIIVMM 394

Query: 333 LMRSHSLLRLRTPSNFLE 350
           + R   L+  R     +E
Sbjct: 395 IFRPQGLVPSRRRRREIE 412


>gi|91789639|ref|YP_550591.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91698864|gb|ABE45693.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas sp. JS666]
          Length = 361

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 98/343 (28%), Positives = 160/343 (46%), Gaps = 17/343 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +V   LL L L   +       +    L+YV+ A GL+IVVG  GLL L  V  +
Sbjct: 6   LVTFFIVAAALLVLPLLLQQGGNAWVRIVDTALLYVLLALGLNIVVGYAGLLDLGYVAFF 65

Query: 75  AIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           A+GAY + +LGS +                 L IW  IP +A ++G  G+++G P+LK R
Sbjct: 66  ALGAYLFALLGSPHLAEAFPVIAAAFPEGLHLPIWAAIPAAAALAGFFGVVLGAPTLKLR 125

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           GDYLAI TL   EI +  L       N   G    +++  +      L +   F    V 
Sbjct: 126 GDYLAIVTLGFGEIIRVFLNNLDRPINLTNGPKGINQIDSMKFFGFDLGKPHEFLGIEVN 185

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                YY+ L +  +S  I   L  + I  AW  IR+++ A  ++       KL AF + 
Sbjct: 186 SVSMYYYLFLVLVIVSVIICHRLENSRIGRAWMAIREDEIAAKAMGINTRNMKLLAFGMG 245

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           + F G++G+ FAA +  +SP+ F   E+I+++++V+LGG+  L  +     +L  + E+ 
Sbjct: 246 ATFGGVSGSMFAAFQGFVSPESFSLMESIMIVAMVVLGGIGHLPGVILGALLLAALPEVL 305

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             +      ++        +    L+ +A+ +V+LMR   L  
Sbjct: 306 RHVAGP-LQAMTDGRLDSAILRQLLIALAMIVVMLMRPRGLWP 347


>gi|317047260|ref|YP_004114908.1| ABC transporter-like protein [Pantoea sp. At-9b]
 gi|316948877|gb|ADU68352.1| ABC transporter related protein [Pantoea sp. At-9b]
          Length = 822

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 61/311 (19%), Positives = 126/311 (40%), Gaps = 32/311 (10%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 Y   +     + V    GL+I++G  G +S   +  YA+GAY    L       
Sbjct: 18  PFVLGSYALLVFSLFALAVTTVVGLNILLGLSGQISFGHIAFYALGAYISAALTMNGVPL 77

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             + + ++ ++ G  G ++ +P+L+  G +LA+ T+  + + +++LI+W+ +T G  G+ 
Sbjct: 78  G-VAMLLAMVVCGVIGGLLAIPALRVSGPFLAMITIAFALVVRHVLIEWRDVTGGSNGLM 136

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                    +   I +      +   + ++   L+ +    A R
Sbjct: 137 GIPMP----------------DFGPLDANIGLALCCAVLMLAALALFARLQGSQWGLAMR 180

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            ++ ++ A  SL    + +K  AFA+S+     AG+F A     I+PD F F+++I+ + 
Sbjct: 181 AVKASEIAARSLGFNPVVSKTLAFALSAMLASAAGSFVAPLMMFINPDSFPFAQSILFVL 240

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
            V++GG  +L        +++ + EL      Y                  +  + L  V
Sbjct: 241 AVVVGGSGTLFGPLLGALLIVVLPELLSSFAEY---------------RLLIFAMLLLSV 285

Query: 332 ILMRSHSLLRL 342
           + +    LL  
Sbjct: 286 LWLAPRGLLGT 296


>gi|62317708|ref|YP_223561.1| branched-chain amino acid ABC transporter ATP-binding protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|83269691|ref|YP_418982.1| glutelin [Brucella melitensis biovar Abortus 2308]
 gi|189022965|ref|YP_001932706.1| branched-chain amino acid ABC transporter, ATP-binding protein
           [Brucella abortus S19]
 gi|254698998|ref|ZP_05160826.1| branched-chain amino acid ABC transporter, ATP-binding protein
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|254732445|ref|ZP_05191023.1| branched-chain amino acid ABC transporter, ATP-binding protein
           [Brucella abortus bv. 4 str. 292]
 gi|260544949|ref|ZP_05820770.1| branched-chain amino acid ABC transporter [Brucella abortus NCTC
           8038]
 gi|260760244|ref|ZP_05872592.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260763482|ref|ZP_05875814.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|62197901|gb|AAX76200.1| branched-chain amino acid ABC transporter, ATP-binding protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|82939965|emb|CAJ12994.1| Glutelin:ATP/GTP-binding site motif A (P-loop):Bacterial
           inner-membrane translocator:Tetracycline resistance
           protein:ABC tran [Brucella melitensis biovar Abortus
           2308]
 gi|189021539|gb|ACD74260.1| branched-chain amino acid ABC transporter, ATP-binding protein
           [Brucella abortus S19]
 gi|260098220|gb|EEW82094.1| branched-chain amino acid ABC transporter [Brucella abortus NCTC
           8038]
 gi|260670562|gb|EEX57502.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260673903|gb|EEX60724.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 609

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 64/325 (19%), Positives = 132/325 (40%), Gaps = 26/325 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A    L   L L    +  ++  + I I ++   +   +IV G  G +SL   + Y IG
Sbjct: 22  IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  ++    G+S W  + +   I+   GM++  P  + +G + ++A++   E+F+ + 
Sbjct: 82  GYT-GVILFNMGISPWFSMFIGTFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 140

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + +  +T G  G+ +  +L ++    R                     ++ GM  ++ +I
Sbjct: 141 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 186

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
               RR+ +       R+ + A  +     +  +L A A+SSA   M G F A     I 
Sbjct: 187 TWAARRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 246

Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P  MF  + +I +    + GG+ +++       +L+ + E            L  F    
Sbjct: 247 PAAMFSLAFSIQIAMFALNGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 302

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 +  + L LV+L   + ++ 
Sbjct: 303 ------VYGLVLILVVLFMPNGIMG 321


>gi|163733584|ref|ZP_02141027.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
 gi|161393372|gb|EDQ17698.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
          Length = 635

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 102/312 (32%), Gaps = 26/312 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLI 96
                   IY + A GL+I  G +G++++       +GAY+  ++          I L I
Sbjct: 346 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQLFIPDYTLSILLAI 405

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++ M++   G+ M    +++   +  + TL+ +      L +      G     +    
Sbjct: 406 PLAFMVTFGAGVAMERLVIRW-LYHRPLETLLATFGVSIALQQLAKNIFGTQARPLTAP- 463

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     +      +  V        +        A  +  ++RT +    R +  N
Sbjct: 464 --------GWLDGSWVINDIVSISYIRIAIFFLALLFLALFLFVMKRTRLGLEVRAVTQN 515

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +   S+        +  F   S   G+AG          S         +     V++G
Sbjct: 516 PRMAASMGINPDKINMLTFGFGSGIAGIAGVAIGLYSKVTSE--MGSEYIVQSFMTVVVG 573

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++        ++  + +    +N            S  +   T M++ + L I  R 
Sbjct: 574 GVGNIWGTLLGATMVGTLQKGIEWLNP-----------SNTLAAQTYMILFIILFIQFRP 622

Query: 337 HSLLRLRTPSNF 348
             ++ L+  +  
Sbjct: 623 RGIIALKGRAAE 634


>gi|269929014|ref|YP_003321335.1| ABC transporter-like protein [Sphaerobacter thermophilus DSM 20745]
 gi|269788371|gb|ACZ40513.1| ABC transporter related protein [Sphaerobacter thermophilus DSM
           20745]
          Length = 631

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 61/312 (19%), Positives = 121/312 (38%), Gaps = 29/312 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +  YI  +   +++  + A  +++V+G  GLL+L     Y IGAY+  +L    G 
Sbjct: 24  PLVIADAYIHRLMATVVLAAVLAVSMNLVLGYGGLLALGHAGFYGIGAYTAALLSLHLGA 83

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              +    +A  +     ++  P L  RG Y A+A L + EI   +   W  +T G +G+
Sbjct: 84  PFLVTALAAAAAAALVAWLVARPILHLRGHYFAMAMLAIGEIVVQVAYNWDSVTRGASGL 143

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               +   +  T  +                  YY+ L +  ++   +     + +    
Sbjct: 144 PGISQPDLIVWTAVTHRDN--------------YYLALVLLLVAMLAVRRFVASPLGLGL 189

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
              RD+ +   S+   +   +  A A+++   G+AGA +A     +S + F+  + I ++
Sbjct: 190 IAARDDDQGAASVGIGVAQTRTLALALAAGIAGVAGALYAHYITFVSVEPFQLEQTIALL 249

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           ++V +GGM +        A+L  + E+                         +    L L
Sbjct: 250 AMVAVGGMGTTWGPVVGAALLTLLPEVLRDFAE---------------LRMVIYGALLML 294

Query: 331 VILMRSHSLLRL 342
           V+ +R   LL  
Sbjct: 295 VVWLRPQGLLGR 306


>gi|332531526|ref|ZP_08407425.1| inner-membrane translocator ABC transporter [Hylemonella gracilis
           ATCC 19624]
 gi|332039027|gb|EGI75454.1| inner-membrane translocator ABC transporter [Hylemonella gracilis
           ATCC 19624]
          Length = 880

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 15/287 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A    +L+     A     Y   +  Q+ +  +   GL++++G  G +S   V  YAIG
Sbjct: 22  IAAFLAVLVLGAGLALSLNGYWVFVLAQVALLAIVGVGLNVLIGLTGQMSFGHVGFYAIG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL ++ G+S W+  P++A +   CG ++ LP+L+ +G YLA+ T+    I ++ +
Sbjct: 82  AYTVAILTTKAGVSFWVAWPIAAALGAVCGALLALPALRVKGPYLAMITIAFGFIVEHGI 141

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++   +T G+ GI         G             ++  +      ++  G        
Sbjct: 142 VEAGALTGGQNGIMGISGPVLGGLAQGERAMALLAIAAAGLALALYAWLACGT------- 194

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
                      A R +RD + A  S+    +  K  AFA+S+     AGA FA     ++
Sbjct: 195 --------WGAAMRAVRDAETAAESIGLNPLVIKTVAFALSALCAAAAGALFAPLSGFVT 246

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           P  F F+++I+ + +V+LGG  S++       I+  + EL  G+  Y
Sbjct: 247 PHTFGFAQSILFVLVVMLGGAGSVAGPMIGAVIVGLLPELLSGLEEY 293


>gi|319792008|ref|YP_004153648.1| ABC transporter [Variovorax paradoxus EPS]
 gi|315594471|gb|ADU35537.1| ABC transporter related protein [Variovorax paradoxus EPS]
          Length = 633

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 111/323 (34%), Gaps = 10/323 (3%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +    ++ L L      ++  S+   I +Y + A GL ++ G  G+ S        +GAY
Sbjct: 25  LTLVFVVALALAWGFLPEFTVSVLSNIGLYALVAAGLVMLTGVGGMTSFGQAAFVGMGAY 84

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +   + +    + WL   VS  +    G+ +GL         L   TL +   +  +   
Sbjct: 85  ATAWICTSPTAAAWLGGAVSPALLPWAGLALGLVFTFALAWALGAVTLKLQGHYLPLCTI 144

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                         +  +  G T  + +         +     +  V+ G+  L+   + 
Sbjct: 145 A---WGLSLYYLFGNMEFLGGQTGITGVPPLVVAGVSLATPRALGVVIWGVLLLALWAMH 201

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  +    A R ++  +    S+       ++  F +++    ++G  +A  +  ++P 
Sbjct: 202 NLLDSREGRAIRALKGGRLMAESMGVDTARHRIKLFVLAALLAALSGWLYAHLQRFVNPT 261

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F  +  I ++ + ++GG   L       A++  + E    +      +   F       
Sbjct: 262 PFNLNIGIELLFMAVVGGAGHLWGAVLGAALITLLKEKLQDVLPALLGTSGNF------- 314

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
              +  + +  V+   +  L   
Sbjct: 315 EVIVFGLLMLFVLQRFADGLWPT 337


>gi|313903205|ref|ZP_07836598.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Thermaerobacter subterraneus DSM 13965]
 gi|313466516|gb|EFR62037.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Thermaerobacter subterraneus DSM 13965]
          Length = 346

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 74/341 (21%), Positives = 136/341 (39%), Gaps = 42/341 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +    +    ++   ++   L A    ++ +++ + I I V+ A  L IV+G  G  S+ 
Sbjct: 7   RRAAAVAAGLILIYAVVQFLLTARILDRFYENVLMNIGINVLAAVSLHIVLGLAGQFSIG 66

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+GAY+  +L  +  +   + +   A+ +   G+++G+PSL+ RGDYLAI TL  
Sbjct: 67  HAGFLAVGAYTSAVLTQKLDMPFAVALLAGALAALLVGLVVGIPSLRLRGDYLAIVTLGF 126

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +EI + IL+  + +                                  +  +  +  L  
Sbjct: 127 AEIVRIILLNVEYVGGAA---------------------------GMRVSHLTSWTALYV 159

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
               +  + +   R+A   A   +R+++ A  ++       K+ AFA+S+ F G+AG   
Sbjct: 160 SVVAAILVTVHFTRSAHGRATLALREDEIAAAAMGVNTTTYKVMAFALSAFFAGLAGGLH 219

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A +   I P  F F ++  ++  V+LGG+ SL     A   L  V               
Sbjct: 220 AHNFYVIQPSNFGFLKSFEILVFVVLGGIGSLPGAILAATFLTLVSIGLQAY-------- 271

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                        L  + L LV+L R   L   R+ + F  
Sbjct: 272 -------PEVRMILYSLVLILVMLFRPQGLWGTRSITGFFP 305


>gi|126665641|ref|ZP_01736622.1| ABC-type branched-chain amino acid transport system [Marinobacter
           sp. ELB17]
 gi|126629575|gb|EBA00192.1| ABC-type branched-chain amino acid transport system [Marinobacter
           sp. ELB17]
          Length = 335

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 70/323 (21%), Positives = 134/323 (41%), Gaps = 17/323 (5%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V+  ++   L    S  +  S+  QI +      GL+++VG  G +SL     + +GAY
Sbjct: 13  LVFLAIVVFALPLFISNPFHYSLATQIALIAGAVVGLNLLVGFAGQISLGHAGFFGLGAY 72

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              I+ S YG S    + V A   G    ++G P L+ +G YL++ATL +  I   IL  
Sbjct: 73  FSAIMTSHYGWSAIPALIVGAFGVGIIAWVVGRPILRLKGHYLSMATLAVGFIIAIILNN 132

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
            + +T G  G+ V    + +     S    +      +  ++  Y     +  ++  +  
Sbjct: 133 EREMTGGPDGMPV--PAFDVFGWELSPFGQYSLFGMDISGDLAWYLFAGVVLLVAVWLAQ 190

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  + I  A R++  ++ A   +       K   F +S+ +  + GA +A  +  I+P 
Sbjct: 191 NLIDSPIGRALRSVHGSEVAASVVGVNTTKYKSLVFVISAVYASVMGALYAHFQGFITPA 250

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  F  +I++I++V+LGGM S   +     +L  + ++      +               
Sbjct: 251 VAGFEFSILLITMVVLGGMGSTIGVIIGAVVLELLPQVLADFQEF--------------- 295

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
              L  + L L ++     LL  
Sbjct: 296 EMVLFGLILMLTMIFMPKGLLPT 318


>gi|121611012|ref|YP_998819.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121555652|gb|ABM59801.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 358

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 76/320 (23%), Positives = 138/320 (43%), Gaps = 20/320 (6%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L L L L     Q+Y  +    +LIY +   GL ++ G  GL SL       +GAY+  
Sbjct: 27  LLCLALVLAPWVVQEYWLAQLSFVLIYAIVGLGLMLLAGFTGLFSLGHAAFLGVGAYTQA 86

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
            L         L +  +A +S A G ++GLP+L+ +G YL +ATL    I + +  +W+ 
Sbjct: 87  GLTGIGWP-FALALVCAAALSAAAGWVVGLPALRVKGIYLGMATLSFGFIVEELFARWES 145

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G AG ++A    +                  +      +++ LG+  +    +L L 
Sbjct: 146 VTGGNAGKHLAPPQVW---------------GLSLESGTAFHFLCLGLTVVCTLAVLNLL 190

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+    A+  IRD++ +  S+   +   K  +F++S+A  G+ GA +A     ISPD F 
Sbjct: 191 RSPTGRAFVAIRDSEISAQSMGIHLARYKTLSFSLSAALAGIGGALYAHKLQFISPDQFG 250

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
             ++I ++ +V++GG+ S+         LI + +L      +   ++ +           
Sbjct: 251 IMQSIDLLLMVVVGGLGSVHGAFLGALFLIAMPQLIALGKDWLPATIGQ----APGLQAV 306

Query: 323 LMVIALFLVILMRSHSLLRL 342
           +    L   +L     L   
Sbjct: 307 VYGAVLIAFVLFEPMGLYGR 326


>gi|326333092|ref|ZP_08199341.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Nocardioidaceae bacterium Broad-1]
 gi|325949075|gb|EGD41166.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Nocardioidaceae bacterium Broad-1]
          Length = 364

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 66/319 (20%), Positives = 137/319 (42%), Gaps = 10/319 (3%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI----LGSRY 88
             S +Y+ +   ++  + + A GL+++ G  G LSL      A+GAY+  +     G   
Sbjct: 35  GTSSQYLQTRYAEMAYFAIAAGGLTLLTGLSGQLSLGHGALMAVGAYAATLVLERTGGET 94

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
              +++ + V+  +    G+++G+P+ +  G Y+A ATL ++     +  +W  +   + 
Sbjct: 95  LADVFVALLVAIAVCAVVGVVVGVPAARLHGPYIAGATLTLAVAVPRLANQWAVLGGEQG 154

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                 R   L   ++ LI F  F +  +    F+ Y+   +  L+   +  L R+ +  
Sbjct: 155 LQVPVPRASELPAWIQDLIWF--FTAVEIDQYSFLAYLGWLLLVLTFVALANLSRSRVGR 212

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
            WR +RD+  +       +  A++ AF VS+   G+AG   A +    +P  F  + ++ 
Sbjct: 213 RWRAVRDDDVSAELAGIHLGRARVVAFTVSAMCAGLAGGLMAMNVRLTAPGAFTITLSLT 272

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           +++ V+LGG+ SL+       +L  +      +      S  +           +  + L
Sbjct: 273 LLAAVVLGGLGSLTGALIGAGVLAFLPHFATDLGESAGLSATQAAEVTP----VVYGLVL 328

Query: 329 FLVILMRSHSLLRLRTPSN 347
            LVIL+    ++    P  
Sbjct: 329 MLVILLAPAGIVGSLRPLL 347


>gi|239906879|ref|YP_002953620.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
 gi|239796745|dbj|BAH75734.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
          Length = 348

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 86/307 (28%), Positives = 144/307 (46%), Gaps = 8/307 (2%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y+  + + I++Y++ A GL+I+ G  GLL L  V  Y IGAY+  +L   Y +S W
Sbjct: 24  FRDVYVLHVLVLIMVYMVLAMGLNILPGFCGLLDLGFVGFYGIGAYTAGLLTIHYNMSFW 83

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L++P++ +     G+++G P+L+  GDY AI T   SE+    L     +T G  GI   
Sbjct: 84  LIVPLAVLNGALFGVLLGAPTLRLVGDYFAIVTFGFSELVVLFLTNEIWLTRGPLGIPGI 143

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             +    T + +L+            E+  YY+ + M  L   ++  +  + +  AW  I
Sbjct: 144 APISLDVTWLATLLGVDERWRYAFRGEVPYYYLAMVMVGLVFVVMTRVEDSRLGRAWLAI 203

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R++  A  S    +   K+ AFAVS+    +AGAF A     ISPDMFKF E+ +V+ +V
Sbjct: 204 REDPMAAASCGVNLFAYKVIAFAVSTGIGALAGAFLARWTLFISPDMFKFWESFLVLCMV 263

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ ++      + ILI + E+                            + + +++ 
Sbjct: 264 VLGGLGNIRGALVGSTILIALGEVLRVALPKLG--------LPAETRFLAYGLIMVVIMR 315

Query: 334 MRSHSLL 340
            R H L 
Sbjct: 316 FRPHGLF 322


>gi|168699519|ref|ZP_02731796.1| inner-membrane translocator [Gemmata obscuriglobus UQM 2246]
          Length = 380

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 84/349 (24%), Positives = 152/349 (43%), Gaps = 9/349 (2%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              +   +   + LL  +     +      +  I +L +V+ A GL++VVG  GLL L  
Sbjct: 5   RGALGYWMVAGFVLLAAVPFLPYRDAPIYGTQAIPVLCFVILALGLNVVVGYTGLLHLGI 64

Query: 71  VIAYAIGAYSYVILGS---RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
              + IGAY+  +L +    +G S  ++   SA+ + A G+    P+L+ RGDYLA+ TL
Sbjct: 65  AAFFGIGAYTAGVLTTTAFPFGSSFVVVAVASALAAAAVGVATTAPTLRLRGDYLALVTL 124

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I   ++     IT+G  G+      +F G     L +     S+      ++YY+ 
Sbjct: 125 GFGLITIYVIRNLAAITDGTQGLTPVAPDFFPGIDDPVLPKSRPGWSNSWRKYPYLYYLC 184

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           LG+       +  L R+ +  AW  +R+++ A   +       KLSA A+ +   G+AGA
Sbjct: 185 LGLLAAVVVFLRNLERSRLGRAWVALREDELAASCMGLNPARLKLSAIALGAGLAGLAGA 244

Query: 248 FFAASRD-RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
            FA S++    P  + F  ++I +  VILGG+ +   +     +L+G  ++   +   + 
Sbjct: 245 LFAVSQNGTTEPKAYGFERSMIALCCVILGGLGNRPGVILGVVLLVGYDQILTPLLDNWL 304

Query: 307 NSLLKFD-----CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            +             +     +  +AL L++ +R   LL        L 
Sbjct: 305 QAQKLNPNGKEYLKVSGWRLCIFGLALILMMRLRPEGLLPSARQKRELH 353


>gi|121609944|ref|YP_997751.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121554584|gb|ABM58733.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 358

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 90/339 (26%), Positives = 159/339 (46%), Gaps = 17/339 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +    LL L L           +    L+YV+ A GL+IVVG  GLL L  V  YA+GA
Sbjct: 9   IIGAIALLVLPLLLQSLGNAWVRIADLALLYVLLALGLNIVVGYAGLLDLGYVAFYAVGA 68

Query: 79  YSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           Y + ++ S +                  S+WL+IP++A+++   G+++G P+LK RGDYL
Sbjct: 69  YLFALMASPHLADNFAAFAALFPHGLHTSLWLVIPLAALLAAFFGVLLGAPTLKLRGDYL 128

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           AI TL   EI +  L       N   G     ++  +      L +        +     
Sbjct: 129 AIVTLGFGEIIRIFLNNLDHPVNLTNGPKGLGQIDSVKFLGLDLGKRLELFGWHINSVTL 188

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            YY+ L +  LS  I   L+ + I  AW  IR+++ A  ++       KL AF + ++F 
Sbjct: 189 YYYLFLALVLLSIVICWRLQDSRIGRAWMAIREDEIAAKAMGINTRDMKLLAFGMGASFG 248

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G++GA F+A +  +SP+ F   E+I+++++V+LGG+  +  +     +L  + E+   + 
Sbjct: 249 GVSGAMFSAFQGFVSPESFSLMESIMIVAMVVLGGIGHIPGVILGAVLLSALPEVLRYVA 308

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                ++        +    L+ +A+ +++L+R   L  
Sbjct: 309 GP-LQAMTDGRLDSAILRQLLIALAMIVIMLLRPRGLWP 346


>gi|187476994|ref|YP_785018.1| branched-chain amino acid ABC transporter permease [Bordetella
           avium 197N]
 gi|115421580|emb|CAJ48090.1| putative branched-chain amino acid ABC transporter, permease
           protein [Bordetella avium 197N]
          Length = 593

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 61/307 (19%), Positives = 128/307 (41%), Gaps = 25/307 (8%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             +   + + I +Y   A   +IV G  G LSL   + Y +G+Y+  +L   +G+S W+ 
Sbjct: 29  SPFAYHLFVLICLYGALATAWNIVGGYAGQLSLGHAVFYGVGSYAATLLVINFGISPWIG 88

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + V   ++    +++  P+ + RG + A+AT+ + E+ + +++     T G AG+ V   
Sbjct: 89  MFVGMALAALVALLISYPTFRLRGPFFALATIAVLEVVKLLVVNQDSWTGGAAGLSVPLN 148

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           +       R                     V  GM  ++  +   +R + +      +R+
Sbjct: 149 IGLEWMIFREKW--------------AYLLVAFGMLAITIWVAWAIRHSRLGFYLVAVRE 194

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENIIVISIVI 274
            + A  ++    +  KL+A  +S+    M G+F A     I P   F    +I +    +
Sbjct: 195 REYAAPAVGIDTVRVKLAAAVISAMLTAMVGSFHAMYLTFIEPSAAFSLELSIQIAMFAL 254

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +GG+ S++     T +++ + EL  G    + + +  F          +  + L LV+L 
Sbjct: 255 IGGLGSVAGPLAGTVLVVPIAELARGWLGAFGSGMHGF----------IYGVILVLVVLT 304

Query: 335 RSHSLLR 341
               ++ 
Sbjct: 305 MPRGIVG 311


>gi|226311263|ref|YP_002771157.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599]
 gi|226094211|dbj|BAH42653.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599]
          Length = 323

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 67/320 (20%), Positives = 132/320 (41%), Gaps = 18/320 (5%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y   +   IL+  + A  + I + S G LSL      +IGA++  IL  +  + ++
Sbjct: 6   ILNPYNLQVLTFILLNSILAISIYITL-STGQLSLGHAGFMSIGAFTASILTKQADMPLF 64

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN--GKAGIY 151
           + I +  +++G   +++G P+LK  G YLAIATL   E+ + I +  +      G  G+ 
Sbjct: 65  IAIIIGGLVAGLIALLIGAPTLKLHGLYLAIATLGFGEVIRVIFLNMEMTNGALGLTGLQ 124

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                 +       +       S   I  +  +  +L +      + L L R+ +  A+ 
Sbjct: 125 SIGNYLYDFEKAMGVKAQTFGISVMQIKSLSTFVFMLLLFAFVLFLTLRLNRSRLGRAFE 184

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            I+ ++ A  ++   + + K+ AF + S   G+ G  FA     I+PD F + + + ++S
Sbjct: 185 AIKADETAARAMGLQVNYYKMLAFVIGSILAGVCGGLFAHITTTITPDDFNYHKVVEILS 244

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             ++GG   +        +L  + E+  G+  Y                  +  + +  V
Sbjct: 245 YAVIGGSEVVWGPLFGAFVLTALPEVLRGLAEY---------------KMLMYGLIMVGV 289

Query: 332 ILMRSHSLLRLRTPSNFLER 351
           +  R H L+   T     +R
Sbjct: 290 MAFRPHGLIGADTFQKLFKR 309


>gi|302335542|ref|YP_003800749.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Olsenella uli DSM 7084]
 gi|301319382|gb|ADK67869.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Olsenella uli DSM 7084]
          Length = 377

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 66/338 (19%), Positives = 117/338 (34%), Gaps = 19/338 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              I  +L   +  +  L +      +Y  S+  Q+ IYV+ A  L+I  G LG L L  
Sbjct: 32  RYVINAVLVAAFIAIGELMIDGGAITRYQTSVLEQVGIYVIMAVSLNIATGYLGQLPLGH 91

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               ++G YS  I   R    + +    +          M L         +  A   + 
Sbjct: 92  AGFMSVGGYSCAIFIMRMSDVMGVG---ARDFVTGAPAAMALFVCGLAFGGVCAAICGVI 148

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV-LLG 189
                + +K   +     G     R+  L                      +  +V    
Sbjct: 149 IGIPALRLKGDYLAIITLGFAEIIRVIMLNIDGVLGFDLTGGAKGLTGIPSYTSFVNTFV 208

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  +S  +I  + ++    A   IRDN+ A  +      + K  AF VS+ F G+AG  +
Sbjct: 209 IVAISLFLIHTMMKSRHGRAILAIRDNEIAAEASGVHTTYYKTLAFVVSAFFAGIAGGLY 268

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A     ++P  F F ++I V+ +V+LGGM S+     +  +L  + E       Y     
Sbjct: 269 AGCIGVMAPAKFGFMKSIEVLVMVVLGGMGSMLGSVVSATVLTVLPEALRAFADY----- 323

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                        +  + L +V++ R    +     S 
Sbjct: 324 ----------RMVVYAVVLIIVMIFRPQGFMGTYDFSL 351


>gi|239625583|ref|ZP_04668614.1| ABC transporter ATPase component [Clostridiales bacterium
           1_7_47_FAA]
 gi|239519813|gb|EEQ59679.1| ABC transporter ATPase component [Clostridiales bacterium
           1_7_47FAA]
          Length = 333

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 63/288 (21%), Positives = 130/288 (45%), Gaps = 14/288 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             +    L+   +    S  Y  ++  Q++I ++  +GL+ + G  G ++L     YA+G
Sbjct: 18  AMMASAFLILALVPLFMSNNYYITILNQMVINMIVVFGLNFITGLAGQMNLGTAGIYALG 77

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  +L   +GLS WL +  + ++    G  +G PSLK +G YL++ TL  SEI + + 
Sbjct: 78  AYTSALLSRNFGLSPWLTMVAALVVGFLIGRGLGYPSLKMKGVYLSLTTLAFSEIIRILA 137

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                IT G  GI    R   L   + + ++               +Y +  +  L   +
Sbjct: 138 TNLMDITGGTQGIKNIPRFRVLFWNLDTNVK--------------YFYFVWTVAVLLCLL 183

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            + +  +     ++ ++DN +A  SL   I   K+ AF +++ +  + GA +A     ++
Sbjct: 184 SMRIAHSKWGREFKAVKDNVEAIESLGLDIKKIKIRAFTLAAVYGALGGALYAHFNQFVT 243

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
              F    +I  + ++++GG+ ++        ++  + E+   +  YY
Sbjct: 244 SLSFTTDLSISYVIMLMIGGIGNILGNIIGAIVITILPEMLRFLGDYY 291


>gi|330966513|gb|EGH66773.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 287

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 94/297 (31%), Positives = 148/297 (49%), Gaps = 23/297 (7%)

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             GLL L  V  YA+GAYSY +L   YGL  W+ +P++ M+S   G ++G P L+ RGDY
Sbjct: 1   MAGLLDLGYVGFYAVGAYSYALLSHYYGLGFWICLPIAGMMSALFGFLLGFPVLRLRGDY 60

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFP 173
           LAI TL   EI +  L     +T G  GI   D+  F G T         ++   +F  P
Sbjct: 61  LAIVTLGFGEIIRIFLRNLTELTGGPNGISNIDKPTFFGLTFERKAAEGMQTFHEYFGLP 120

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
            + +   +F+Y + L +   +  +I  L R  I  AW  +R+++ A  +L       KLS
Sbjct: 121 YNSINKVVFLYLIALLLALAALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLS 180

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
           AF + +AF G AG+FFAA +  ++P+ F F E+ I+++IV+LGGM S   +  A  ++I 
Sbjct: 181 AFTLGAAFAGFAGSFFAARQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMIL 240

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           + EL    + Y                  +    + L+++ R    L ++ P   L+
Sbjct: 241 LPELMREFSDY---------------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 282


>gi|302562408|ref|ZP_07314750.1| branched-chain amino acid ABC transport permease [Streptomyces
           griseoflavus Tu4000]
 gi|302480026|gb|EFL43119.1| branched-chain amino acid ABC transport permease [Streptomyces
           griseoflavus Tu4000]
          Length = 379

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 67/330 (20%), Positives = 126/330 (38%), Gaps = 7/330 (2%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           AV+  L + L L       +   +G+  +   + A GL+++ G+ G LSL      A+GA
Sbjct: 14  AVLPLLAVVLCLPPFYLDAFWLRIGLFSMAAAIGAVGLALLSGTAGQLSLGHAFFLAVGA 73

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL--PSLKFRGDYLAIATLIMSEIFQNI 136
           Y Y  L    G  +   +     +  A          + + +G YL IATL +  +  ++
Sbjct: 74  YGYAWLAGEPGPGLPPALAALLAVLLAGAAGGLFSPVAARVKGIYLGIATLALVFLGHHV 133

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           L+    +T G  G      L   G                   E  ++++ L +   +  
Sbjct: 134 LLTADSVTGGFNGRS-VPPLTLGGFAFTESDPELTVLGVPFGAEERLWFLGLALFAFTWF 192

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               L+R     A   +RD++ A   +   +   + +AF VSS + G+AG   A +  R+
Sbjct: 193 TARGLQRGRPGRALAALRDSETAASVMGVDVARHRSAAFVVSSMYAGLAGVLLALAFRRV 252

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY----FNSLLKF 312
            PD F  + ++  ++++++GG+ S++        +  +  L                 + 
Sbjct: 253 VPDYFSLALSVDYLAMIVIGGLGSVAGATAGAVFVTALPLLMTRYADQLPLVTAPGSAEG 312

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                     L   A+ LV+L     L  L
Sbjct: 313 AVGPTEAARYLYGAAIVLVLLYAPDGLHGL 342


>gi|119946608|ref|YP_944288.1| ABC transporter inner-membrane translocator [Psychromonas
           ingrahamii 37]
 gi|119865212|gb|ABM04689.1| ABC transporter inner-membrane translocator [Psychromonas
           ingrahamii 37]
          Length = 547

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 102/312 (32%), Gaps = 21/312 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+        + ++ A GL+I  G +G++++       +GAY+  ++   +   I   +
Sbjct: 257 DYLFFGLSMGSVLLLAAIGLTITFGVMGVINMAHGEMMMLGAYTTYVIQQTFPNLIEYSL 316

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++   +     ++G+   +    +L    L      + +L  +      +  +      
Sbjct: 317 LMAVPAAFLVSGLVGVLIERGVIRFLKGRPL------ETLLATFGISLILQQLVRTVFSP 370

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     +      +          Y+++    +  S+++ L+++++    R +  N
Sbjct: 371 LNRQVEAPQWMSGSLEINPIFSLTYNRLYIIIFALMVFFSLLMILKKSSLGLHVRAVSQN 430

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +    +L+    +     F + S   G+AG   +   +            I    +V+ G
Sbjct: 431 RDMARALSIKSSWVDAITFGLGSGVAGIAGVALSQLTNV--GPNLGQDYIIDSFLVVVFG 488

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ SL     A   L    +                     +    ++++ L L I  R 
Sbjct: 489 GVGSLWGTLVAAMTLGTFNKFLE-------------PSMGPVLANIIVLVGLVLFIQKRP 535

Query: 337 HSLLRLRTPSNF 348
             L   +  S  
Sbjct: 536 KGLFPQKGRSAE 547


>gi|311109141|ref|YP_003981994.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310763830|gb|ADP19279.1| inner-membrane translocator 61 [Achromobacter xylosoxidans A8]
          Length = 588

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 64/337 (18%), Positives = 128/337 (37%), Gaps = 37/337 (10%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++L+K    L + A+            +    +   +   I +Y + A G +I+VG  G 
Sbjct: 1   MKLSKILIPLVIAALAIG------YAYSGLNDFYLLILFNIGVYYIAATGFNILVGQTGQ 54

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
            SL     + +GAY+  +L   Y +  WL +  +A++S   G+++ +P+LK +G  LA+ 
Sbjct: 55  KSLGHAGLFGVGAYTVALLTVNYQVDPWLALACAAVVSAVFGVVIAIPALKVKGPSLAMV 114

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           T+    + + I+ +W  +  G+ G Y    L F G T+ S           +        
Sbjct: 115 TIAFGLLIEKIVSEWTDVFKGQEGFYGITGLTFGGATLDSRQWVVVVVVLGLALHAMTSL 174

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +L                      +  +R ++ A  S+  ++   K+ AFA+S+   G+A
Sbjct: 175 LL---------------NGRFGRGFAAVRTSEIAAESVGISVYRFKILAFAISAITCGIA 219

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G   A     I+ D   F+ ++  + +V+ GG  + +       +L  +  +        
Sbjct: 220 GGLVAQQNQYINSDFVNFNLSVFFLVLVLFGGR-TPAGSFLGAVVLTVIDAMLAR----- 273

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                     +         + L   +      L  L
Sbjct: 274 ----------WPEVQHFAYGLILLFALYAMPEGLAGL 300


>gi|326789584|ref|YP_004307405.1| ABC transporter transmembrane protein [Clostridium lentocellum DSM
           5427]
 gi|326540348|gb|ADZ82207.1| ABC-type transporter, integral membrane subunit [Clostridium
           lentocellum DSM 5427]
          Length = 359

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 85/361 (23%), Positives = 146/361 (40%), Gaps = 45/361 (12%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            + L+K   ++  L  +  L++FLF+      KY+  +     IY + A  +++V G  G
Sbjct: 3   KINLSKKTNMILSLIAIAVLIIFLFIAEPVFGKYVSRIIKLSAIYAICALSMNMVNGFTG 62

Query: 65  LLSLNCVIAYAIGAYSYVILGSRY-------------------GLSIWLLIPVSAMISGA 105
           L SL      AIGAY+  IL                        L   + + +  +++ A
Sbjct: 63  LFSLGQPGFMAIGAYTTAILTLTQSDKQSVFYMSPMPAFLESAHLPFIVALVLGGLLAAA 122

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
           C  I+G P L+ RGDYLAIATL  SEI + IL   + ITNG  GI               
Sbjct: 123 CAYIIGFPVLRLRGDYLAIATLGFSEIIRVILQNMQNITNGPLGINKIPNH--------- 173

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                              ++  G+  +    +L + +T+   A + IR+++ A  ++  
Sbjct: 174 ----------------VSMWMAFGVLAIITIFMLVMMKTSYGRALKAIREDEVAAEAMGV 217

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
            +   K+ AF +S    G+AG    +    I P  FKF+    ++ +V+LGG  S+S   
Sbjct: 218 NLFKHKMLAFVLSGFIAGIAGGLLGSLVGAIDPTQFKFTFAYTLLLMVVLGGQGSISGSI 277

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
               I+    E+   ++       + +          +  + L  +IL  S  +   +  
Sbjct: 278 VGAFIITCAQEILRFVDEPINFGFIHYP-GIEGMRMVVFSVMLMCIILFWSRGIFGNKEF 336

Query: 346 S 346
           S
Sbjct: 337 S 337


>gi|288960159|ref|YP_003450499.1| ABC transporter ATP-binding [Azospirillum sp. B510]
 gi|288912467|dbj|BAI73955.1| ABC transporter ATP-binding [Azospirillum sp. B510]
          Length = 578

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 72/307 (23%), Positives = 124/307 (40%), Gaps = 29/307 (9%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y   +     +Y + A+G  IV G  G LSL     + +GAY   ILGSRYGL     
Sbjct: 29  SPYGLRVLTVAGVYALAAFGFQIVFGLGGALSLAQGAFFGVGAYVTGILGSRYGLGFEAT 88

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
            P+S ++     + +GL  L+    Y A+ATL ++++   + +    +T G  G+     
Sbjct: 89  FPLSLLVPLLLALPVGLAVLRLESHYFALATLGIAQVLHLLAVNLPELTGGSNGLAGVPA 148

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
               G  V   +                  ++ G+  L   I   L R     A   +RD
Sbjct: 149 AVLFGWAVPRGLPMAG--------------LVWGLVALGGLIGWRLSRGRFGRALTMLRD 194

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A  +L   +   +L+AF VS+ F G AGA    ++  +SP++ +F   I +++I I+
Sbjct: 195 DPLAAGTLGLDVGRLRLAAFGVSALFGGAAGALAVHTQRVVSPEVLEFPVMISILTIAIV 254

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG   ++       +L+ + E    +   Y                 +   AL   +++ 
Sbjct: 255 GGRGRMAGAVLGAVLLLHLPEWFRFLERGY---------------LVVYGAALLATVVLA 299

Query: 336 SHSLLRL 342
              L  L
Sbjct: 300 PDGLTGL 306


>gi|167750014|ref|ZP_02422141.1| hypothetical protein EUBSIR_00982 [Eubacterium siraeum DSM 15702]
 gi|167657035|gb|EDS01165.1| hypothetical protein EUBSIR_00982 [Eubacterium siraeum DSM 15702]
          Length = 369

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 68/335 (20%), Positives = 135/335 (40%), Gaps = 23/335 (6%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
              K      ++  +  +++ +          ID + + + +Y + A  L++ VG LG L
Sbjct: 15  PQTKKSFTTYIMVTLAFVIMMILSSTGNVSSQIDGLLVPLCVYSILAVSLNLTVGILGEL 74

Query: 67  SLNCVIAYAIGAYSYVILGSRY-------GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           SL       +GAY+  +             +   L I V  + +   G+++G+P L+  G
Sbjct: 75  SLGQAGFMCVGAYASALFSLATKETILVEWVRFPLAILVGGIFAAIFGILIGIPVLRLNG 134

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           DYLAI TL   EI +N+      +     G+++A     +                  + 
Sbjct: 135 DYLAIVTLAFGEIIKNVFAAL-YVGVDSKGLHIALNQADMNLEADGTEIIRGALGVKGVP 193

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
               + V   +  ++  I      +    A + IRDN  A  S+   I   KL  FA+++
Sbjct: 194 NDSSFVVGFILLLITLIISYNYINSRTGRAVKAIRDNSIAAESVGLNITKYKLITFALTA 253

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
              G+AGA ++ +   +    F ++ +I+++  V+LGG+ ++     A  +L  + EL  
Sbjct: 254 FLAGIAGALYSHNYATLQASKFDYNLSILILVFVVLGGIGNIRGSVIAAVVLTLIPELLR 313

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
            +N Y                  +  I L +++++
Sbjct: 314 SINSY---------------RMLIYSIVLIVMMIL 333


>gi|83594836|ref|YP_428588.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
 gi|83577750|gb|ABC24301.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
          Length = 373

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 68/351 (19%), Positives = 144/351 (41%), Gaps = 27/351 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGAT--------KSQKYIDSMGIQILIYVMFA 53
            IF    +++  +  L A+   ++L                +  Y  S+GIQ+  Y + A
Sbjct: 21  KIFDTPTSRWAMVGFLCALYGLVILPQAFPPLASLPVLRLFADGYALSLGIQVCYYAIAA 80

Query: 54  WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113
            GL+I+VG  G +SL     + +GA+S   L +R GL + + IP++ ++S A G++ G P
Sbjct: 81  LGLNILVGFTGQISLGHAAFFGVGAFSSAWLNTRVGLPVLVCIPLAGLMSAAAGLLFGAP 140

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
           + + +G YLAIATL    I +++ ++    T G +G      +                 
Sbjct: 141 AARIKGLYLAIATLAAQFIIEDLFVRMDWFTGGSSGAMADTPMLGSFAFDNDARY----- 195

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
                     + + L    +   +   L R+    A+  +RD+  +   +   +   ++ 
Sbjct: 196 ----------FLLSLSFTIVLFVMAANLMRSRDGRAFVALRDHYLSAEVMGIALTRYRVM 245

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
           +F +++ + G+ GA +      +S + F    +I  + ++I+GG+ S+      T  ++ 
Sbjct: 246 SFGIAAFYAGIGGALYGHYLMFVSAEAFTILLSIQFLGMIIIGGLGSVMGAMLGTIFMVA 305

Query: 294 VVELCCGMNFYY----FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           + E+   +        + +               +  A+ L ++     L 
Sbjct: 306 LPEVMGAVIAALQTTQWGNRPAVINGLPFFREMAIGAAIILFLIFEPDGLA 356


>gi|221194504|ref|ZP_03567561.1| ABC-type branched-chain amino acid transport system, permease
           component [Atopobium rimae ATCC 49626]
 gi|221185408|gb|EEE17798.1| ABC-type branched-chain amino acid transport system, permease
           component [Atopobium rimae ATCC 49626]
          Length = 378

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 67/344 (19%), Positives = 119/344 (34%), Gaps = 19/344 (5%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            L + +   I  L+  V+       +G     +Y   +  Q+ IYV+    L+IV G LG
Sbjct: 25  HLSMTQRYLINALVVAVFIFGGNALVGEGIISRYQTVILEQVGIYVLMTVSLNIVTGYLG 84

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            L L      +IG Y+  I   R    + L +   A+ S        L         +  
Sbjct: 85  QLPLGHACFMSIGGYACAIFIIRVMPLVGLSVTDMALGSAPAIA---LFVSGLLFGGVVA 141

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
               +      + +K   +     G     R+  +        +     S       +  
Sbjct: 142 GLAGVIIGIPALRLKGDYLAIITLGFAEIVRVVLINIDATLGFKLTGGASGLTGIPAYTS 201

Query: 185 YV-LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           ++    +  LS  +I  L ++    A   IRDN+ A  +      + K  AF  S+   G
Sbjct: 202 FLNTALVVALSIFLIHTLMKSRHGRAILAIRDNEIAAEASGVNTTYYKTLAFVFSAFLAG 261

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           +AG  +A     ++P  F F +++ ++ +V+LGGM S+     +  +L  + E       
Sbjct: 262 IAGGLYAGCIGVMAPAKFGFMKSVEILVMVVLGGMGSMFGSVISATVLTILPEALRAFAD 321

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
           Y                     + L LV++ R   L      S 
Sbjct: 322 Y---------------RMLAYAVVLILVMIFRPKGLCGSYDFSL 350


>gi|149378160|ref|ZP_01895878.1| ABC-type transporter, permease component: HAAT family protein
           [Marinobacter algicola DG893]
 gi|149357564|gb|EDM46068.1| ABC-type transporter, permease component: HAAT family protein
           [Marinobacter algicola DG893]
          Length = 343

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 61/320 (19%), Positives = 131/320 (40%), Gaps = 28/320 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L   +      + +Y   +     ++ +  +GL+I+ G  G L+L     +AIGAY+ 
Sbjct: 16  LMLAFAILFPLVAANEYQVYVMATAFVWAIAVYGLNIITGFCGQLNLAHGGFFAIGAYTL 75

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +L + YG S W     + +++   G ++G+ SL+ +  Y AI TL +  I   ++ KW+
Sbjct: 76  GLLTADYGWSFWPAFLGALVMTAVLGFLVGIVSLRLKEHYFAIFTLCVGFIIYLLIDKWE 135

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T+G  G+                   + F           YY++L     +   +  L
Sbjct: 136 ELTHGAIGVRDIAAP-------------YGFGLVDFTDTTPFYYLVLAFLVFAIWFMGRL 182

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            ++ +   +  IR+  +   SL   ++  K+ AF +S+ + G+AGA +A     I P+  
Sbjct: 183 SKSLLGRTFIAIRNGDELAQSLGINLMRNKVLAFVLSTTYAGLAGALYAGMVRFIGPEEA 242

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             +    +I+ +++GG+ ++      T  ++ + +    +  Y                 
Sbjct: 243 NINHTFDMITYLLVGGIGTIMGPLLGTVGIVWITQSLQFLEEY---------------RM 287

Query: 322 TLMVIALFLVILMRSHSLLR 341
            +    L L+++     +  
Sbjct: 288 IIFGPLLVLLVIFFPRGITG 307


>gi|257438526|ref|ZP_05614281.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Faecalibacterium prausnitzii A2-165]
 gi|257199105|gb|EEU97389.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Faecalibacterium prausnitzii A2-165]
          Length = 337

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 72/340 (21%), Positives = 137/340 (40%), Gaps = 39/340 (11%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             ++  + V    +   +L       Y + + + + I ++ A  L++  G LG L L   
Sbjct: 13  RYLMNAVLVALLFVALSYLTRNILSTYQNKVLMTVGINIILAVSLNVATGYLGQLPLGHA 72

Query: 72  IAYAIGAYSYVILGSRYGLS----IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
              A+GAY+  +      L       + + ++ +++G  G+++G+P+L+  GDYLAI TL
Sbjct: 73  GFMAVGAYTCALFTKFCPLPDGVSFAIGLVLACIVAGLFGVLIGIPALRLTGDYLAILTL 132

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              EI +  L     +                         F+       I +   +  +
Sbjct: 133 GFGEIIRITLNNIDDVLG--------------------FKLFYGSKGLKNIPKYSNFTNV 172

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++  +I  + ++    A   IRDN+ A  S      + K+ AFA S+AF G+AG 
Sbjct: 173 FLCVVITCFLIHAMMKSRHGRAVLAIRDNEIAAESCGIQTTYYKVMAFAFSAAFAGLAGG 232

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A     ++P  F F ++I ++ +V+LGGM S+     +  +L  + E     + Y   
Sbjct: 233 LYACYIGVLNPSTFGFMKSIEILVMVVLGGMGSMLGSILSATVLTILPEATRSFDSY--- 289

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  + L L+++ R   LL     S 
Sbjct: 290 ------------RMVIYSLVLILMMIFRPGGLLGSYDFSM 317


>gi|297616859|ref|YP_003702018.1| inner-membrane translocator [Syntrophothermus lipocalidus DSM
           12680]
 gi|297144696|gb|ADI01453.1| inner-membrane translocator [Syntrophothermus lipocalidus DSM
           12680]
          Length = 301

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 68/316 (21%), Positives = 125/316 (39%), Gaps = 41/316 (12%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y   + I   I ++ A GL+++ G  G LS+      +IGAY+  IL    G   W  
Sbjct: 13  DAYYLRILILFGINIILALGLNLITGVTGQLSMGHAGFMSIGAYTSAILSLHTGAPFWSC 72

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +   A+++G  G+++G+P+L+  GDYLA+ T+  +EI + + +    +     G+     
Sbjct: 73  LVAGAVVAGMFGVLIGVPTLRLEGDYLAMVTIGFAEIVRVVFLNL-DVAGKAIGLSGIPS 131

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                          +  +          L ++ +  A   IR+
Sbjct: 132 HTGFVN-------------------------VWAVALAVIIANWQLLKSRVGIALYAIRE 166

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  +        K+ AFAV S   G+AG F+A     I+P  F F ++I ++++V+L
Sbjct: 167 DEIAAEASGVNTTLYKIGAFAVGSFLAGIAGCFYAHFITYINPQDFGFMKSIEILNMVVL 226

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S+        +L    E+   +  Y                       L ++++ R
Sbjct: 227 GGMGSIPGTILGAFVLTLAPEMLRVVQEY---------------RLLFYGALLVIMMIFR 271

Query: 336 SHSLLRLRTPSNFLER 351
            + LL         +R
Sbjct: 272 PNGLLGDVRWHEIRKR 287


>gi|225350883|ref|ZP_03741906.1| hypothetical protein BIFPSEUDO_02457 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158339|gb|EEG71581.1| hypothetical protein BIFPSEUDO_02457 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 377

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 75/345 (21%), Positives = 139/345 (40%), Gaps = 42/345 (12%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +  +  +V   +L           Y+  + +   I V+    L++ +G LG L+L C 
Sbjct: 14  YALCAIGVLVLFGILVAVCETGAISLYVKGILMTCCIAVIMTTSLNLTIGVLGQLTLGCC 73

Query: 72  IAYAIGAYSYVILG---------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
              AIGAYS  ++              +   L+  V  +++   G+++G+P+L+  GDYL
Sbjct: 74  GFEAIGAYSAALMSKLLVANGVQMDDTVRFLLVTFVGGVVACVFGVLVGIPALRLHGDYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           AI TL   EI + I+   K                      + L    +  +   I  + 
Sbjct: 134 AIITLGFGEIIRVIIQNLKVAGG------------------KGLADGQQGQALIGIDRLA 175

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
             YV+  +  ++  ++    R+    A + IRD++ A  +    I + K+  FA+S+ F 
Sbjct: 176 NLYVVFCITVVTVVLLFMFARSRYGRAVKAIRDDEIAAGASGINITYMKVLVFAISAFFA 235

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+AG  FA     ++P M  + ++I  + +V+ GGM SL+    A   L  + EL    +
Sbjct: 236 GIAGGIFAQYIGALTPSMAGWLQSINYVIMVVFGGMGSLTGSIVAAVGLTILPELLRAFS 295

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
            Y                  +  + L ++++ R   L      S 
Sbjct: 296 AY---------------RMLVYSVVLVIIMVFRPQGLFGNWEFSL 325


>gi|307725631|ref|YP_003908844.1| ABC transporter-like protein [Burkholderia sp. CCGE1003]
 gi|307586156|gb|ADN59553.1| ABC transporter related protein [Burkholderia sp. CCGE1003]
          Length = 619

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 46/334 (13%), Positives = 107/334 (32%), Gaps = 29/334 (8%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           ++   +  L  +    +L +  G      Y+ ++ IQ   + + A  + ++ G  G L+ 
Sbjct: 24  SRSRPLRGLATIGVLGVLLIAAGPFLFGSYLLNVLIQAFFFSIVAVTVDVLWGYTGYLTF 83

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                + +GAY+  ++ +  G S   ++   A        +  L          +     
Sbjct: 84  GQSAFFGLGAYAAGLVFTHGGFSAAYVLLALAATLAVTAGVAALLGWLSFYRGASPFFAT 143

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +  +   I++    ++ G+                           +F +     Y++  
Sbjct: 144 VMSLVLPIVLSQLLLSGGE---------------WTGSSSGLTGYQTFDLSLEAWYWIAG 188

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
               +   +     R+        IRDN+     L       K+     ++A  G+AG  
Sbjct: 189 AALAVVVGLAWIFVRSDGGRVLAAIRDNESRCLYLGINTSLVKIVLLVATAAVAGLAGFG 248

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           + +    ++P++  F     +I  V LGG  +L        ++        G+  +    
Sbjct: 249 YGSFSGVVAPELTGFVLGTQLIIWVALGGRGTLWGPVIGALLINVGTSYLSGIMPF---- 304

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         ++  A   VI++    L+ L
Sbjct: 305 ----------AWQLILGAAFVAVIVLLPQGLVPL 328


>gi|91975257|ref|YP_567916.1| ABC transporter related [Rhodopseudomonas palustris BisB5]
 gi|91681713|gb|ABE38015.1| ABC transporter related [Rhodopseudomonas palustris BisB5]
          Length = 590

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 54/312 (17%), Positives = 103/312 (33%), Gaps = 22/312 (7%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
                   Y  ++   I I  + A GL ++ G  G+ S         GAY+  +L   YG
Sbjct: 21  PFTGLMPDYWITLFNYIGISSLVAIGLVLLTGVGGMTSFGQAAFVGFGAYTTGVLTVYYG 80

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +S WL +P +  ++    +++G  +++  G YL + T+     F  +      +     G
Sbjct: 81  VSPWLTLPAAIAVTMVAALLVGAITVRLSGHYLPLGTIAWGIAFFYLFGNMSWL-GAHDG 139

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +     L                    +I     + V+     L+      L    +  A
Sbjct: 140 LPGIPALQ--------------IGGYALIQPRDYFVVVWIAVVLAVIATQNLLSGRVGRA 185

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R +R + +A  +       AKL  F  ++   G+AG  +A  +  +SP  F  +     
Sbjct: 186 VRALRRSTRAAEAFGVNTAGAKLLVFVYAAMLAGLAGWLYAHFQRSVSPGPFGITAGTEY 245

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           + + +LGG   +       A +  + +               F               L 
Sbjct: 246 LLMAVLGGAGRVYGAILGAAGITFLRDQLQDWLPKLLGHTGNF-------EIIAFGAVLV 298

Query: 330 LVILMRSHSLLR 341
           L++      L  
Sbjct: 299 LLLQTAPGGLWP 310


>gi|225628840|ref|ZP_03786874.1| high-affinity branched-chain amino acid transport system permease
           protein LIVH / high-affinity branched-chain amino acid
           transport ATP-binding protein LIVG [Brucella ceti str.
           Cudo]
 gi|260167153|ref|ZP_05753964.1| high-affinity branched-chain amino acid transport system permease
           protein LIVH / high-affinity branched-chain amino acid
           [Brucella sp. F5/99]
 gi|261756555|ref|ZP_06000264.1| branched-chain amino acid ABC transporter [Brucella sp. F5/99]
 gi|225616686|gb|EEH13734.1| high-affinity branched-chain amino acid transport system permease
           protein LIVH / high-affinity branched-chain amino acid
           transport ATP-binding protein LIVG [Brucella ceti str.
           Cudo]
 gi|261736539|gb|EEY24535.1| branched-chain amino acid ABC transporter [Brucella sp. F5/99]
          Length = 605

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 65/325 (20%), Positives = 132/325 (40%), Gaps = 30/325 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A    L   L L    +  ++  + I I ++   +   +IV G  G +SL   + Y IG
Sbjct: 22  IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+ VIL +       +    S  I+   GM++  P  + +G + ++A++   E+F+ + 
Sbjct: 82  GYTGVILFNMG-----ISPWFSMFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 136

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + +  +T G  G+ +  +L ++    R                     ++ GM  ++ +I
Sbjct: 137 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 182

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +RR+ +       R+ + A  +     +  +L A A+SSA   M G F A     I 
Sbjct: 183 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 242

Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P  MF  + +I +    ++GG+ +++       +L+ + E            L  F    
Sbjct: 243 PAAMFSLAFSIQIAMFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 298

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 +  + L LV+L   + ++ 
Sbjct: 299 ------VYGLVLILVVLFMPNGIMG 317


>gi|332981086|ref|YP_004462527.1| amino acid/amide ABC transporter membrane protein 2 [Mahella
           australiensis 50-1 BON]
 gi|332698764|gb|AEE95705.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Mahella australiensis 50-1 BON]
          Length = 318

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 75/341 (21%), Positives = 137/341 (40%), Gaps = 41/341 (12%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +      +       ++ L +      +++      + I ++ A  L+++ G  G  SL
Sbjct: 5   RRNLIRNIVTLAAIYAIIQLLISFDIIDQHLQLNLFLLCINIILAVSLNLITGFTGQFSL 64

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                 AIGAY   ++  +  L   L I  SA+ +   G+++G+P+L+ RGDYLAIATL 
Sbjct: 65  GHAGFMAIGAYVSAVMTLKLHLPFPLAIATSAISAAIVGVLVGIPTLRLRGDYLAIATLG 124

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +SEI + I +    I  G +G+    R                            +  + 
Sbjct: 125 LSEIIRIIALNIDYI-GGASGLADIPR-------------------------YVNWPWIF 158

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            M   +  II     ++   A   IR++  A  S+   I   K+ AF + + F G+AG+ 
Sbjct: 159 AMTAGTIIIIYNFIHSSYGRACIAIREDDIAAESMGIDIAHYKILAFTIGAFFAGIAGSL 218

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +A     + P+ F F ++I ++ +V+ GG+ S++      A L  +  +   +       
Sbjct: 219 YANYFYFLKPNAFGFMKSIDILVMVVFGGLGSITGSVVGAAALTLLSMVLQDL------- 271

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
                         L  + L +++L R   LL     S  L
Sbjct: 272 --------PTLRMILYALLLLVIMLYRPQGLLGNAELSWKL 304


>gi|188587332|ref|YP_001918877.1| inner-membrane translocator [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179352019|gb|ACB86289.1| inner-membrane translocator [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 360

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 70/330 (21%), Positives = 135/330 (40%), Gaps = 24/330 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   +   L +++ L+  + +      +   ++   I+IY + A G +I++G  G +SL 
Sbjct: 5   KRPYLYITLGLLFILVPIVNIYLPIFSRGQMTILNMIVIYSIGAIGFNILLGYSGQVSLG 64

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
            +    +GAY    +     LS  L + V+ +I    G+I+G  +L+  G YLAIATL +
Sbjct: 65  HIAFMGLGAYLSAYITQVMDLSFILGLLVAGIIPMLLGLILGAIALRLEGHYLAIATLGL 124

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
               ++I I+W   T G +G        F    ++                     +   
Sbjct: 125 GMTIKHIFIEWTAFTEGFSGRRAPPAEIFGLEIIQREH---------------SLILGTI 169

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  + A     L  +    A   +RD+  A  ++  ++   K+ AFA+S+ ++G+AG  +
Sbjct: 170 VLVILAIFAYNLLNSKTGRALMAMRDSSHAAQAVGISMFKYKMIAFAISTFYVGIAGGLY 229

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A     I P  +    ++ ++++ ++GG+ S+       A L  V  L   +        
Sbjct: 230 AHLIRFIEPTRWGLEASLDLVAMTVIGGLASIGGSVVGAAFLEIVPNLARNLPVLEGIRS 289

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           + F          +  I L L I+     L
Sbjct: 290 INF---------IITGILLILTIIYFPEGL 310


>gi|292655348|ref|YP_003535245.1| putative branched-chain amino acids ABC transporter permease
           [Haloferax volcanii DS2]
 gi|291371373|gb|ADE03600.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haloferax volcanii DS2]
          Length = 374

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 68/347 (19%), Positives = 132/347 (38%), Gaps = 22/347 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R     +I  +L ++  LL+   L      +++      + +Y + + GL++  G  GL
Sbjct: 13  VRDATERRIFAVLGLITVLLVVGVLTGVVGLRFLLFQIALVGMYALLSLGLNVQWGYAGL 72

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGL-----SIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           ++ +    + IGAY   +L +                 + ++S    +++G+P+L+ R D
Sbjct: 73  INFSVAAFWGIGAYCAALLTAPNSPLGLGLHPVFGFLGAIVVSALIAVLIGIPTLRLRED 132

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLAIA+L ++E+ + I++     T G  GI     L                    +   
Sbjct: 133 YLAIASLGLAEVIRTIILNEDQWTAGSRGISGIPNL---------------LSWLPLTDS 177

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
                V++ +  +    +  + R+      RTIR ++    +L       K+ AF + S 
Sbjct: 178 ATTAAVVVVLIAVVYLFLRRVHRSQWGRVLRTIRSDEDLAKALGKNTYRFKMQAFVLGSV 237

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
            + +AGAF+A     I P          +   VILGG  S        A++I + E    
Sbjct: 238 IVAVAGAFYAHLNLYIDPSDLVPLTTFYIWIAVILGGTGSNRGAVVGAAVVIAIREGTRF 297

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
           +N      +              +   + L++  R   LL  +    
Sbjct: 298 LND--IGFIQTLGVDLAPLRLLFVGGLIILIMRFRQDGLLPPKDELI 342


>gi|221212528|ref|ZP_03585505.1| ABC transporter ATP-binding/permease protein [Burkholderia
           multivorans CGD1]
 gi|221167627|gb|EEE00097.1| ABC transporter ATP-binding/permease protein [Burkholderia
           multivorans CGD1]
          Length = 854

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 54/333 (16%), Positives = 105/333 (31%), Gaps = 34/333 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             V  L L     A  +         QI IY ++  G++++V   GL+     + +    
Sbjct: 11  VAVLTLSLVAVSLALTATGTPLERATQIAIYTLYGMGVNLLVAYTGLVPFGASVFFGTTT 70

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y   +       +  L +  S +++     ++G   L+ RG Y ++ TL  S+I   I  
Sbjct: 71  YLVAVSLLHVLGNEVLALAASVLVTTVLAALIGAIVLRRRGLYFSLLTLACSQIAFEIAF 130

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           KW  +T G+ G+    R  F                         +          A ++
Sbjct: 131 KWTDVTGGENGLQNVPRPTFP-------------------TAAAFHVFACVTVIAVAWLL 171

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +       A + +RDN++   SL       KL AF +S+A IG AG            
Sbjct: 172 WRIVHAPFGRALQALRDNEQRAASLGYDTYRLKLRAFVISAAVIGYAGGLLCLMLQGAYA 231

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           +   +      + + +LGG+             I + +    +  +++            
Sbjct: 232 NNLSWEHAGDSLLMTVLGGVHQFLGPLWGAIAFILLEDKLSSLTEHWW------------ 279

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               +    +          +  +        R
Sbjct: 280 ---LIFAPIVIAFAFFSPEGIHGIVQRVLRRSR 309


>gi|86137780|ref|ZP_01056356.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85825372|gb|EAQ45571.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 661

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 103/311 (33%), Gaps = 26/311 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---RYGLSIWLLI 96
                   IY + A GL+I  G +G++++       +GAY+  ++      + +SI + +
Sbjct: 372 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQQVIPNHTVSILVAV 431

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++  ++ A G+ M    +++  +      L+ +      L +      G     +    
Sbjct: 432 PLAFAVTFAAGVAMERLVIRWLYNRPLET-LLATFGISIALQQLAKNIFGTQARPLTAP- 489

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     +      +  V        + +         +  +RRT +    R +  N
Sbjct: 490 --------GWLDGAWIINDVVSISYIRIAIFMLALIFLGVFLFIMRRTRLGLETRAVTQN 541

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +    S+        +  F + S   G+AG          S     +         V++G
Sbjct: 542 RAMAGSMGINPERVNMLTFGLGSGIAGIAGVAIGLFAKVTSELGSDYIVQS--FMTVVVG 599

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++        ++    +    +N            S  +   T M++ + + I  R 
Sbjct: 600 GVGNIWGTLAGATMIGFFQKGVEWLNP-----------SNTLAAQTYMILFIIVFIQFRP 648

Query: 337 HSLLRLRTPSN 347
             ++ L+  + 
Sbjct: 649 RGIIALKGRAA 659


>gi|170740545|ref|YP_001769200.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168194819|gb|ACA16766.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 357

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 69/325 (21%), Positives = 133/325 (40%), Gaps = 19/325 (5%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            V   +  L        +Y  S+ IQI  + + A GL+I+VG  G +S+     +  GA+
Sbjct: 31  AVLAGIALLACAPLVLDRYWLSLLIQIGYFAVAALGLNILVGFTGQISIGHAAFFGFGAF 90

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +   L + + + ++  IP++ +++ A G++ GLP+ + +G YLAIATL    I Q+   +
Sbjct: 91  ASAWLSNTFSVPVFFAIPLAGVLTTAVGLVFGLPAARLKGLYLAIATLAAQYILQDFFAR 150

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
               T G AG                                  +YV+L    L+  +  
Sbjct: 151 ANWFTGGVAGTPAEAFSILGFAFDTDQRY---------------FYVVLAYLVLTFVLAT 195

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L R+    A   +RD+  +   +   +   +  +F +S+ F G+ G  +A     +S +
Sbjct: 196 NLMRSRDGRALVAVRDHYLSAEMMGINLTRYRTLSFGLSAFFAGVGGGLYAHYLQFVSVE 255

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS----LLKFDCS 315
            F    +I  + ++I+GG+ S+      TA ++ V E    +      S     L    +
Sbjct: 256 GFGILLSIQFLGMIIIGGLGSIMGTLMGTAFMVLVPEAMGWLTDAVKGSAVDRALALKDN 315

Query: 316 FNMRHTTLMVIALFLVILMRSHSLL 340
            +      + + + L ++     L 
Sbjct: 316 LSFLREMAIGLVIVLFLIFEPDGLA 340


>gi|296534601|ref|ZP_06897013.1| branched-chain amino acid transport system protein [Roseomonas
           cervicalis ATCC 49957]
 gi|296265088|gb|EFH11301.1| branched-chain amino acid transport system protein [Roseomonas
           cervicalis ATCC 49957]
          Length = 588

 Score =  113 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 58/309 (18%), Positives = 106/309 (34%), Gaps = 28/309 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 Y   +   + I+ M     +I+ G  GL+S      +  GAY+  IL   YG++
Sbjct: 25  TFLISGYELLVISMVGIWAMLGLSWNILGGYGGLVSFGHAAFFGGGAYTVAILFHDYGVT 84

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            W+   + A I     +++G  + + +G Y ++A L        +               
Sbjct: 85  PWIGCLLGAGIGALLAVLIGAITFRLKGHYFSLAMLAYPLALIPVFTWAGWHELALPLQR 144

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                Y   +                     M  ++LG   ++  I L + RT +     
Sbjct: 145 QDPLHYMQFSD-----------------PRVMPLIILGALGIALFICLRIERTRLGLQLF 187

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVI 270
            IR N+ A        +  KL A A+S    G+AGA +A     ++P   F    +   +
Sbjct: 188 AIRQNELAAQCAGIATLRTKLVASAISGGIAGLAGALYATVVLVVTPHSVFGMLVSAQGL 247

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            + + GG+ +         IL+ + E+           +             +  IA+  
Sbjct: 248 IVSMFGGLGAAWGPVIGAIILVPLAEMLNATIGARLPGMQG----------VVFGIAIMA 297

Query: 331 VILMRSHSL 339
           VIL R   +
Sbjct: 298 VILFRPQGI 306


>gi|328543776|ref|YP_004303885.1| amino acid or sugar ABC transporter, permease [polymorphum gilvum
           SL003B-26A1]
 gi|326413520|gb|ADZ70583.1| Putative amino acid or sugar ABC transport system, permease protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 319

 Score =  113 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 65/324 (20%), Positives = 133/324 (41%), Gaps = 24/324 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + ++  ++L           +   +G  + I  +   GL +++G  G +SL       IG
Sbjct: 9   ITLLALVVLIAVAPLFFPSAFYYRVGTLMFINGLAVTGLVVLIGYAGQISLGHAGFSGIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  +     GL     +   A++SG    ++G P L+ +G YLA+ATL    +   +L
Sbjct: 69  AYACALGPLHLGLPPAASLVFGAVLSGGIAWLVGRPILRLKGHYLAVATLGFGILVSMVL 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                +T G  G+               L    R     V      Y+    +    A +
Sbjct: 129 TNEAHLTGGPDGM---------AVEDLGLRAALREIGISVRAPELWYWFSGLVLLAGAWL 179

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +L L+ +    A R++ D++ A  ++   +   KL+AF +S+ +  +AG+  A     +S
Sbjct: 180 VLNLQDSPTGRALRSLHDSEIAARTVGVDVARYKLTAFVISAVYASVAGSLLAMMNRFVS 239

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           PD+  F  +I ++++ +LGG  ++       +IL  + ++    + Y             
Sbjct: 240 PDIAGFLHSIQMVTMTVLGGAGTVLGAVTGASILTALPQVLTVFHDY------------- 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                ++ + + LV++     L+ 
Sbjct: 287 --EHIVLGLIMMLVMIFLREGLVP 308


>gi|239945414|ref|ZP_04697351.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces roseosporus NRRL 15998]
 gi|239991876|ref|ZP_04712540.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces roseosporus NRRL 11379]
          Length = 406

 Score =  113 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 71/324 (21%), Positives = 129/324 (39%), Gaps = 16/324 (4%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY---------- 81
                ++    G+  +   + A GL+++ G+ G LS+      A+GAY Y          
Sbjct: 50  PFYLDRFWLQAGLFAMAAAIGAIGLNMLTGATGQLSMGHAFFLAVGAYGYCVLAGESGTE 109

Query: 82  -VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                +  GL  WL   ++ +++GA G I    + + RG YL IATL +  I Q++L   
Sbjct: 110 NGHTLTGLGLPTWLAAILAVLLAGAAGGIFSPIAGRLRGAYLGIATLALIFIGQHVLFNA 169

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G  G  V     F  T   S +     P        +   + L +  L A  +L 
Sbjct: 170 GSLTGGYNGRAVPPLSVFGFTFDDSELIVAAVPFGSSEKLWYAGLLALLLSALFARGVLR 229

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
            R      A   IRD++ A   +   +   +   F +SS + G+AG   A    R  P+ 
Sbjct: 230 GR---PGRAMNAIRDHRIAAGVMGVPVARYRAGVFVLSSMYAGLAGVLLALVFQRTVPEY 286

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--YYFNSLLKFDCSFNM 318
           F    ++  ++++++GG+ S++      A +  + ++    +      ++      +   
Sbjct: 287 FGMILSLEYLAMIVIGGLGSVAGAVIGAAFVSLLPQVFTHYSDSLPLVSAPGTGGLAPGE 346

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
               L   A+  V+L     L RL
Sbjct: 347 ASRYLYGAAVVAVVLFLPGGLARL 370


>gi|323530296|ref|YP_004232448.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
 gi|323387298|gb|ADX59388.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
          Length = 619

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 48/327 (14%), Positives = 105/327 (32%), Gaps = 29/327 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L A+    +L +  G      Y+ ++ IQ   + + A  + I+ G  G L+      + 
Sbjct: 31  GLAAIGMLGVLLIAAGPFVFGTYLLNVLIQAFFFSIVAVTVDILWGYTGYLTFGQSAFFG 90

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY+  ++ +  G S   ++   A        +  L          +     +  +   
Sbjct: 91  LGAYAAGLVFTHGGFSTAYVLLAFAATLAVTAGVAALLGWLSFYRGASPFFATVMSLVLP 150

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I++    ++ G+                           +F +     Y++      +  
Sbjct: 151 IVLSQLLLSGGE---------------WTGSSSGLTGYQTFDLSLEAWYWIAGAALAVVV 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +     R+        IRDN+     L       K+     ++A  G+AG  + +    
Sbjct: 196 GLAWIFVRSDGGRVLAAIRDNESRCLYLGINTSLVKIVLLVATAAVAGLAGFGYGSFSGV 255

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P++  F     +I  V LGG  +L        ++        G+  +           
Sbjct: 256 VAPELTGFVLGTQLIIWVALGGRGTLWGPVIGALLINVGTSYLSGIMPF----------- 304

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                  ++  A   VI++    L+ L
Sbjct: 305 ---AWQLILGAAFVAVIVLLPQGLVPL 328


>gi|254427270|ref|ZP_05040977.1| amino acid or sugar ABC transport system, permease protein,
           putative [Alcanivorax sp. DG881]
 gi|196193439|gb|EDX88398.1| amino acid or sugar ABC transport system, permease protein,
           putative [Alcanivorax sp. DG881]
          Length = 365

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 74/320 (23%), Positives = 138/320 (43%), Gaps = 13/320 (4%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L   L         Y       +L++ +   GL ++ G  G +SL      AIGA++ 
Sbjct: 26  AILAALLLAAPWVLGNYYLGELTAVLVWSLAGLGLMLISGHTGQVSLGHAAFMAIGAFTN 85

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +   + G      +  SA+ SG  G ++  P L+  G YL IATL +S I +++ I  +
Sbjct: 86  -LALMQRGWHFLPALLASAVTSGVAGAVIARPILRMSGIYLGIATLALSIIVEDVSIMAE 144

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
           P+T G AG++               I  F             YY+ LG+  L     L L
Sbjct: 145 PVTGGVAGVFAPP------------ISLFGMEIDRYATPEAFYYLCLGVLVLVTLGYLNL 192

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R+A   ++  +RD++ +  +L   +  AK  AF++S A  G+AGA +A     ++ + F
Sbjct: 193 LRSASGRSFLAVRDSEVSARALGVNVARAKTLAFSLSCAITGLAGALYAHLAQAVNYESF 252

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
               +I ++  V++GG+ S+        +++ + ++    + Y  N+      ++    T
Sbjct: 253 LVLISITLLLQVVIGGLGSVHGAFFGAIVVVLLPQVIAIASDYLDNTAGIQIAAYPGLDT 312

Query: 322 TLMVIALFLVILMRSHSLLR 341
            L  + + L+++     L  
Sbjct: 313 ALFALLILLMVIYEPRGLYG 332


>gi|291279875|ref|YP_003496710.1| branched-chain amino acid ABC transporter permease [Deferribacter
           desulfuricans SSM1]
 gi|290754577|dbj|BAI80954.1| branched-chain amino acid ABC transporter, permease [Deferribacter
           desulfuricans SSM1]
          Length = 350

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 75/321 (23%), Positives = 138/321 (42%), Gaps = 15/321 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++Y  ++ LFL    S  Y+  +   I I V+ A GL+I+ G+ GL+SL       +GA
Sbjct: 27  IMIYGFIIILFLLPVISNDYVLYLFNLIFISVIGAVGLNILTGATGLISLGHGAFIGVGA 86

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+   + +   ++    I    +++   G I G+PSL+ +G YL+IATL    I +   +
Sbjct: 87  YAAGYIFNTLHINFLFAILFGGIMAALVGSIFGIPSLRLKGLYLSIATLAAQFIIEFFFV 146

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           + + IT G  G+                + +       +  +   YY+ L  C +     
Sbjct: 147 RLESITGGVTGLS---------------VDYASIFGIEIDNDFKFYYLGLVFCIVMTLFA 191

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + RT I  A+ +IRDN  A   +   I   K+ +FA+SS + G+AG  +      I+P
Sbjct: 192 ANIMRTKIGRAFLSIRDNYIAAEVMGVNIFQYKILSFAISSFYAGVAGGLWTFYTTIITP 251

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F    +I  +S++I+GG+  +         +  + E    ++ Y           F  
Sbjct: 252 EHFTIGVSIQYLSMIIIGGLGKVLGSIFGAVFMTILPESIKFVSDYLSQYYPNITQLFAS 311

Query: 319 RHTTLMVIALFLVILMRSHSL 339
               +  + + L ++     L
Sbjct: 312 IREGVFGLVIILFLMFEPEGL 332


>gi|194292490|ref|YP_002008397.1| high-affinity branched-chain amino acid transport, inner-membrane
           translocator, livhm family [Cupriavidus taiwanensis LMG
           19424]
 gi|193226394|emb|CAQ72343.1| high-affinity branched-chain amino acid transport, Inner-membrane
           translocator, livHM family [Cupriavidus taiwanensis LMG
           19424]
          Length = 348

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 58/320 (18%), Positives = 126/320 (39%), Gaps = 28/320 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L L +         Y  ++     IY +   GL+++ G  G L+L      AIGAY+ 
Sbjct: 12  LLLALAIAFPLVTPNSYYLTVMTLAFIYAIATLGLNLITGYTGQLNLAHGGFMAIGAYTL 71

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            IL   + +  WL   ++ ++    G ++G+ SL+ +G Y +I T+ +  I   ++ KW+
Sbjct: 72  GILTVDHQVPFWLAFVLAGVLCMVLGYVVGVVSLRLKGHYFSIFTMCVGYIIYLLIEKWE 131

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T+G  G+                                 YY++L    L   ++  +
Sbjct: 132 SLTHGTVGLIGIPVPA-------------AIGPLSFDSVQAQYYLVLAFLALGVFLMHRI 178

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             + +  ++  +R++     +L   ++  K+ +F +S  + G AGA +A     + PD+ 
Sbjct: 179 VTSLLGRSFMAVRNSDALAEALGINLMRTKVLSFVLSVGYAGFAGALYAGQVRFLGPDIA 238

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
           +      ++  +++GG+ +L        ++  + +    M  Y                 
Sbjct: 239 RTDLTFDMVMSMLVGGIGTLFGPLLGAVLVPWITQSLQFMQDY---------------RM 283

Query: 322 TLMVIALFLVILMRSHSLLR 341
            +    L L+I+     ++ 
Sbjct: 284 LVFGPVLILLIIFVPDGIVG 303


>gi|156743438|ref|YP_001433567.1| ABC transporter-like protein [Roseiflexus castenholzii DSM 13941]
 gi|156234766|gb|ABU59549.1| ABC transporter related [Roseiflexus castenholzii DSM 13941]
          Length = 616

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 61/328 (18%), Positives = 133/328 (40%), Gaps = 28/328 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++A+    L+F  +  +  + +       I + ++ A  L++ +G  GL S+     Y
Sbjct: 9   IWIIALCGSALIFPLIFPSTERNFWTYYSATIGVTILLASALNLSLGYTGLFSMAHSALY 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ AY+  +L +R G   WL +PV+  ++   G +M + +L+    Y A+ TL  + + Q
Sbjct: 69  AVAAYTSAVLVTRAGWPFWLSLPVAVCLTALVGALMAVTTLRASNLYFAVITLAFALLIQ 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +   W PIT G  G++   R  F    +                    ++ +  M  ++
Sbjct: 129 ELARVWTPITGGLFGLHSVPRPSFGDQPMS---------------LATYFFFIWFMVGIA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  +  +    A+R ++  ++A  +L    +  KL AF++S+A  G+AG  F     
Sbjct: 174 LWGLANIVDSRYGRAFRALKLREEAAAALGVAPLRYKLIAFSLSAALAGVAGVLFVHLAG 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P++      +++   V +GG+ +L+          G+ +                  
Sbjct: 234 FVAPEIAGLDAGLLLFVSVFIGGVGTLTGPVIGVLFASGLQQAIGNTLDA---------- 283

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   +    + L +L+    L+  
Sbjct: 284 ---AYQQLIFGAVMLLTMLVLPAGLIGT 308


>gi|300313300|ref|YP_003777392.1| branched-chain amino acid ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300076085|gb|ADJ65484.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 597

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 55/312 (17%), Positives = 114/312 (36%), Gaps = 22/312 (7%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
                + ++       I +Y + A GL ++ G  G+ S        +GAY+   L + +G
Sbjct: 19  FPLLPTPQFWVIQANYIGLYALVAIGLVLLTGIGGMTSFGQAAFVGMGAYTTSYLTTVHG 78

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +S WL +PV   I+G    ++G  +L+  G YL +AT+        +  K   +     G
Sbjct: 79  VSPWLTLPVGLFITGVSAYVLGRITLRMSGHYLPLATIAWGISLYFLFGKVDFL-GKYDG 137

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           I     L   G  +                   +YY++  +   +A + L L  +    A
Sbjct: 138 ISGIPALQLAGLDLAKERH--------------LYYLIWAIVLAAAWVSLNLLDSRAGRA 183

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R ++  +    ++       K+  F  ++    ++G  FA  +  ++P  F  +  I  
Sbjct: 184 IRALKGGRSMAEAMGVDTGRYKILIFVFAALLASVSGWLFAHMQRTVNPSPFSLAMGIEY 243

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           + IV++GG+  +        +L  + +    +                   + +  + L 
Sbjct: 244 LFIVVVGGIAHIWGALLGAGVLKLLSDQLQVLLPALLGDG-------GSYESIVFGLILI 296

Query: 330 LVILMRSHSLLR 341
           L++      L  
Sbjct: 297 LLLKYAGGGLWP 308


>gi|212702299|ref|ZP_03310427.1| hypothetical protein DESPIG_00310 [Desulfovibrio piger ATCC 29098]
 gi|212674292|gb|EEB34775.1| hypothetical protein DESPIG_00310 [Desulfovibrio piger ATCC 29098]
          Length = 342

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 82/328 (25%), Positives = 147/328 (44%), Gaps = 31/328 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+  L   L +    +  Y   + + I +Y + A  L++++G  G+  +     +A+GA
Sbjct: 5   IVIVGLAAALLVLPLFTNPYWTDVCVSIGLYALLALSLNVILGQAGIFHMGHAAFFAVGA 64

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           YS  IL + Y   I+L +PV+   +    +++  P +  RGDYL I T+ + EI +  LI
Sbjct: 65  YSTAILNTMYYWPIFLTMPVAGCAAALFALVVARPIIHLRGDYLLIVTIGIVEIVRIALI 124

Query: 139 K-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                +T G  GI+   R  F G  +   + F              YY++ GM  +S  +
Sbjct: 125 NDVGGLTGGSNGIFGISRPVFFGFRIFKPLHF--------------YYLVWGMVGVSLLL 170

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L R+ I  A   I+++  A       +   KL AF + + + GMAG  +AA    I+
Sbjct: 171 FYGLWRSRIGRALNCIKEDDVAAEGCGINVTHYKLMAFVLGAFWAGMAGTLYAAKMTTIA 230

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F F E++I+ ++VIL G  S   +  +  + IG+ EL    +               
Sbjct: 231 PESFNFMESVIIFAVVILSG-GSQLGVLVSAFLFIGLPELLREFSG-------------- 275

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTP 345
                +  +A+ L+++ R   L+  ++ 
Sbjct: 276 -ARMLIFGLAMMLMMIWRPQGLMPPKSR 302


>gi|332798397|ref|YP_004459896.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp.
           Re1]
 gi|332696132|gb|AEE90589.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter
           sp. Re1]
          Length = 287

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 67/305 (21%), Positives = 129/305 (42%), Gaps = 37/305 (12%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y   +   I+I  + A  L+++ G  G LSL       IGAY+  +   +  L   + I
Sbjct: 2   NYYLQILTVIMINSILAVSLNLITGYTGQLSLGHATFMGIGAYAATLFTLKLHLPFLISI 61

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            + A ++   G I+G+P+L+ +GDYLAIATL   EI +NIL+    IT G  G+      
Sbjct: 62  VLGASVAAFFGFIIGVPTLRLKGDYLAIATLGFGEIMKNILLNL-KITGGPMGLRGIP-- 118

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                  ++   Y+     FL    +  +  + +  ++  IR++
Sbjct: 119 -----------------------KVTNIYIAAVALFLVIFSLNRIMNSRVGKSFIAIRED 155

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  ++       K+ AF + + + G+AG  +A     I+P  F F ++I ++ +V+LG
Sbjct: 156 ELAAEAMGINTTQFKILAFIIGAFYAGLAGGLYAFLFRYINPKDFGFMKSIEILCMVVLG 215

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM +         I+  + EL   ++                       + L ++++++ 
Sbjct: 216 GMGNTYGAVLGACIITVLPELLRSISP-----------VIAQYRMVFYGLLLIIMMIVKP 264

Query: 337 HSLLR 341
             ++ 
Sbjct: 265 EGIIS 269


>gi|221196889|ref|ZP_03569936.1| ABC transporter ATP-binding/permease protein [Burkholderia
           multivorans CGD2M]
 gi|221203559|ref|ZP_03576578.1| ABC transporter ATP-binding/permease protein [Burkholderia
           multivorans CGD2]
 gi|221177493|gb|EEE09921.1| ABC transporter ATP-binding/permease protein [Burkholderia
           multivorans CGD2]
 gi|221183443|gb|EEE15843.1| ABC transporter ATP-binding/permease protein [Burkholderia
           multivorans CGD2M]
          Length = 854

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 54/333 (16%), Positives = 105/333 (31%), Gaps = 34/333 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             V  L L     A  +         QI IY ++  G++++V   GL+     + +    
Sbjct: 11  IAVLTLSLVAVSLALTATGTPLERATQIAIYTLYGMGVNLLVAYTGLVPFGASVFFGTTT 70

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y   +       +  L +  S +++     ++G   L+ RG Y ++ TL  S+I   I  
Sbjct: 71  YLVAVSLLHVLGNEVLALAASVIVTTVLAALIGAIVLRRRGLYFSLLTLACSQIAFEIAF 130

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           KW  +T G+ G+    R  F                         +          A ++
Sbjct: 131 KWTDVTGGENGLQNVPRPTFP-------------------TAAAFHVFACVTVIAVAWLL 171

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +       A + +RDN++   SL       KL AF +S+A IG AG            
Sbjct: 172 WRIVHAPFGRALQALRDNEQRAASLGYDTYRLKLRAFVISAAVIGYAGGLLCLMLQGAYA 231

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           +   +      + + +LGG+             I + +    +  +++            
Sbjct: 232 NNLSWEHAGDSLLMTVLGGVHQFLGPLWGAIAFILLEDKLSSLTEHWW------------ 279

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               +    +          +  +        R
Sbjct: 280 ---LIFAPIVIAFAFFSPEGIHGIVQRVLRRSR 309


>gi|322369207|ref|ZP_08043772.1| ABC-type branched-chain amino acid transport system, permease
           protein II [Haladaptatus paucihalophilus DX253]
 gi|320550939|gb|EFW92588.1| ABC-type branched-chain amino acid transport system, permease
           protein II [Haladaptatus paucihalophilus DX253]
          Length = 377

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 63/343 (18%), Positives = 133/343 (38%), Gaps = 14/343 (4%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           +  F         +  L   V+P L       +   +   S+   ILI+ +FA G ++++
Sbjct: 25  LDRFGSSERSIVGLTVLAVAVFPWLFVRAPVISGLFRGYQSLASLILIWGIFALGFNLLL 84

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  GLLS      +   AY+  I  +    S  L++    + +     I+G  SL+  G 
Sbjct: 85  GYTGLLSFGHAAFWGGAAYAAGIFSASVSGSPVLMVLFGTLFAVLLAWILGFVSLRRGGI 144

Query: 121 YLAIATLIMSEIFQNILIK-WKPITNGKAGIYVAD-RLYFLGTTVRSLIRFFRFPSSFVI 178
           Y +I TL   ++   + +   + +TNG+ G    D    F      S        +   +
Sbjct: 145 YFSILTLAFGQMAYYLALSPLQGLTNGENGFTDVDVGNLFGFLDAFSAFESIPLGTPVPL 204

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
              ++Y  +  +  L  + ++ +  +     ++ IR+N++    +   +   KL AF +S
Sbjct: 205 LGDWLYVFVGAITVLCVAAVVRILHSPYGLVFKAIRENEQRASFVGLNVWRYKLMAFILS 264

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
            AF G+AG+ F      +  +   ++ +  ++ + +LGG+ S+        + + V  + 
Sbjct: 265 GAFAGVAGSLFVVHGSYVPVESLYWTTSGEIVVMTVLGGVGSMVGPMLGAGLYLYVENVV 324

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            G            D +       ++ +    VI +    +  
Sbjct: 325 SG------------DPAIQPYWHLILGLIFVAVIALFPEGIWG 355


>gi|293400321|ref|ZP_06644467.1| hydrophobic amino acid uptake (HAAT) family ABC transporter,
           permease protein LivM [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291306721|gb|EFE47964.1| hydrophobic amino acid uptake (HAAT) family ABC transporter,
           permease protein LivM [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 318

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 77/350 (22%), Positives = 145/350 (41%), Gaps = 43/350 (12%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
              +  K + I  ++  V   +  + +             I I I ++ A GL++++G  
Sbjct: 1   MKSQFTKRNLIWTIVVCVIFSIFQIAISGRMIPNTYQVAIITIGINIILALGLNLIIGFT 60

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGL--SIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           G  SL      +IGAYS  I+ ++      +++ + V   I+    +I+ +P+L+ RGDY
Sbjct: 61  GQFSLGHAGFMSIGAYSAAIVLAKMPNLTGLFVGMLVGMAITAVVALIVAIPTLRLRGDY 120

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LAIATL  SE+ +  +   + IT G AG+    +L                         
Sbjct: 121 LAIATLGFSEVIRIAIQNME-ITGGAAGLSNIPKLTTFP--------------------- 158

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
               ++     +S  +I    R++   A  ++R+++ A  S+       K  AF + +  
Sbjct: 159 ----LVFVFIVISVIVIHNFIRSSHGRACISVREDEIASESMGINTTKYKTLAFVIGAML 214

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
             +AGA +AA    + P  F F ++I ++ IV+ GGM SLS    A  +L  +       
Sbjct: 215 ASIAGALYAAYFYVLKPTTFGFMKSIDILVIVVFGGMGSLSGSILAAIVLGIINLTLQSY 274

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +                    L  +A+ ++++ R   L   +  ++FL +
Sbjct: 275 SE---------------IRMILYALAIIVIMVYRPQGLFGSKEVTDFLPK 309


>gi|15805313|ref|NP_294005.1| branched-chain amino acid ABC transporter permease [Deinococcus
           radiodurans R1]
 gi|6457954|gb|AAF09864.1|AE001889_10 branched-chain amino acid ABC transporter, permease protein
           [Deinococcus radiodurans R1]
          Length = 334

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 66/336 (19%), Positives = 128/336 (38%), Gaps = 24/336 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
                +   LL   +       +   + I ++I+ +  +GL++++G  G L L     + 
Sbjct: 10  AAWLWIPAFLLAAAVPFLHPSGFTMELLINVMIWSIVTYGLNVLLGYTGQLPLAHAGFFG 69

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY+  IL  ++G S W   P++ ++    G+++GL + + +GD  +I TL +  I Q 
Sbjct: 70  IGAYTVGILTLKHGWSFWAAWPLAVVLCALGGLLLGLVAFRTKGDAFSIFTLGVGVIIQQ 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           ++ KW  +T G  G+        L T               +      Y + L    L+ 
Sbjct: 130 VINKWDALTGGNDGLNGIAPPAGLDTF---------AHGLGLKLNGGFYLLALLALALTV 180

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +    R +    +   IR  +    S    +   KL A  +S+A  G AG  +A     
Sbjct: 181 LVAARARHSVFGRSLLAIRGGEDLARSAGIDVFGHKLRAMMLSTAIAGFAGGLYAVYVGF 240

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +   +         +  +++GG+ +L      TA++ G+ +L   +  Y           
Sbjct: 241 LGSAVTGPVTTFTTLLYLLVGGVGTLLGPLLGTALMYGLTQLLKDLQDY----------- 289

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                  +    L L+++     L+ L        R
Sbjct: 290 ----QYIVFGPLLVLLVMFMPQGLVGLWEKVRARRR 321


>gi|225028598|ref|ZP_03717790.1| hypothetical protein EUBHAL_02877 [Eubacterium hallii DSM 3353]
 gi|224954080|gb|EEG35289.1| hypothetical protein EUBHAL_02877 [Eubacterium hallii DSM 3353]
          Length = 361

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 73/337 (21%), Positives = 135/337 (40%), Gaps = 24/337 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  K   I   + +   +++ + +        +  + + + IY + A GL++ VG LG L
Sbjct: 11  KQTKSMLITYAMVIAVFIIVEIMISTGMMSSLMQGLLVPLCIYSIVAIGLNLCVGYLGEL 70

Query: 67  SLNCVIAYAIGAYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           SL       +GA+S  +                 L + +  +++   G ++G+P L+ RG
Sbjct: 71  SLGHAGFMCVGAFSSAVFSKCMMTSGMNETLRFILALLIGTVVAAVFGWLIGIPVLRLRG 130

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           DYLAI TL   EI +N++       + K   +       L       +            
Sbjct: 131 DYLAIVTLAFGEIIKNVINVMYLGRDSKGFHFSIKDSASLNMQADGKMIIDGAKGIVGTP 190

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
               + V + +  +S  +   L  +    A   IRDN+ A  S+   I   KL AF +S+
Sbjct: 191 NQSTFVVGIIIILISLFVSFNLVNSRTGRAIMAIRDNRIAAESVGINITKYKLMAFTISA 250

Query: 240 AFIGMAGAFFAASRDRIS--PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           A  G  G  +A +   ++  P  F ++ +I+++  V+LGGM S      A  +L  + E+
Sbjct: 251 AIAGAGGVLYAHNLSTLTALPANFGYNMSIMILVFVVLGGMGSFRGSIIAAVVLTMLPEV 310

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
             G+  Y                  +  I L +++L 
Sbjct: 311 LRGLADY---------------RMLIYAIVLIIMMLF 332


>gi|317401970|gb|EFV82572.1| high-affinity branched-chain amino acid transport ATP-binding
           protein LivG [Achromobacter xylosoxidans C54]
          Length = 612

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 50/325 (15%), Positives = 120/325 (36%), Gaps = 22/325 (6%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L  V+ ++L        + ++  +    I +  +   GL ++ G  GL S        +
Sbjct: 4   ILLAVFIVVLAGLPLLPVTPEFWVTQLNYIGLASLVVLGLVLLTGVGGLTSFGQAAFVGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+   L ++Y +S WL +P   +++     ++G  +L+  G YL + T+        +
Sbjct: 64  GAYTTAYLTTQYDVSPWLALPAGLILTAVVAYLLGAITLRLSGHYLPLGTIAWGLSLYFL 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                 +     GI   + +   G ++ S                 +YY++     L+  
Sbjct: 124 FGNLDWL-GKHDGIAGIEPISIFGMSLASGRH--------------IYYLIWVFVLLALW 168

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               L  +    A R ++       S+       K+  F  ++    ++G  +A  +  +
Sbjct: 169 ATRNLLNSRPGRAIRALKSGAGMAESMGVNTAAYKVVIFVWAALLACVSGWLYAHMQRAV 228

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP  F  +  I  + + ++GG   +      +++++ + +    +     ++   F    
Sbjct: 229 SPSPFGINYGIEYLFMAVVGGAGYVWGALLGSSVILVLKDQLQNLLPKLLDTNANF---- 284

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 +  + L L++    + L  
Sbjct: 285 ---EMIVFGVLLILMLQYARNGLWP 306


>gi|159038915|ref|YP_001538168.1| inner-membrane translocator [Salinispora arenicola CNS-205]
 gi|157917750|gb|ABV99177.1| inner-membrane translocator [Salinispora arenicola CNS-205]
          Length = 390

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 147/376 (39%), Gaps = 56/376 (14%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATK---------------SQKYIDSMGIQILIYVM 51
           R  ++  +L  +A +Y L     +  T                       +     +YV+
Sbjct: 28  RWQRWLTVLAGIAFLYYLPFLGDIPGTNLIIPGIDWFRTDSIDGGSNWAGVLFVCALYVL 87

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-----------------GSRYGLSIWL 94
            A GL++V+G  GLL L  V  YA+GAYS  +                     + ++  +
Sbjct: 88  VAIGLNVVIGLAGLLDLGYVGFYAVGAYSVALFGSAQSPVVQALQRQFGLSQDWAIAWAI 147

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
            IP++   S   G+++G P+L+ RGDYLAI TL   EI + +                 +
Sbjct: 148 CIPIALAFSLVAGVLLGWPTLRLRGDYLAIVTLGFGEIIRIVAKNSAW---------AGE 198

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                G                ++     Y++ + +  L   ++  L  + +  +W  IR
Sbjct: 199 AQGVPGIPGPEGPPSADNTVFGLLDIKPWYWLAVTVVLLMVMLVRRLEHSRVGRSWLAIR 258

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           +++ A   +       KL AFA+ +A  G +G  FA+    I P+ F    +I+ +++V+
Sbjct: 259 EDEDAAAVMGVYPFKFKLWAFAIGAALGGFSGLLFASRSAFIQPETFNVQLSILFVAMVV 318

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +GG  +++ +A    +L  + E       Y                     +AL L++L+
Sbjct: 319 VGGSGNMAGVALGAFLLAYLPERFRDFAEY---------------RVLAFGLALVLIMLL 363

Query: 335 RSHSLLRLRTPSNFLE 350
           R   LL  R  +  L+
Sbjct: 364 RPQGLLPSRRRTRELQ 379


>gi|89902265|ref|YP_524736.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89347002|gb|ABD71205.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 358

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 83/325 (25%), Positives = 147/325 (45%), Gaps = 20/325 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L     L+L L L     Q+Y  +    +LIY +   GL ++ G  GL SL       +G
Sbjct: 22  LFWYGALMLVLLLAPWLVQEYWLAQLTFVLIYAVAGLGLMLLAGFTGLFSLGHAAFLGVG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  +L +       L +  +A +S A G+++GLP+L+ +G YL IATL    I + +L
Sbjct: 82  AYTQAVLTNMGLP-FPLALACAAGLSAAVGLVVGLPALRVKGIYLGIATLSFGFIVEEVL 140

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +W+ +T G +GI++     F  T                      Y++ L +  L+   
Sbjct: 141 ARWESVTGGNSGIHIKKPDMFGWTLDSGEA---------------FYFLCLLITVLATLG 185

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           IL L R+    A+  IRD++ +  S+   + + K  +FA+S+A  G+AGA +A     IS
Sbjct: 186 ILNLLRSPTGRAFVAIRDSEISAQSMGIHLAYYKTLSFALSAALAGIAGALYAHQLQFIS 245

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           PD F   ++I ++ ++++GG+ S+         LI + +    +  Y   ++ +      
Sbjct: 246 PDQFNILQSIDLLLMIVIGGVGSVHGAFLGAIFLITMPQAIAMVKDYLPPTIGQ----AP 301

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                +  + L   +L     L   
Sbjct: 302 GLQGLVYGVVLVAFVLFEPLGLYGR 326


>gi|295104030|emb|CBL01574.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           (TC 3.A.1.4.-) [Faecalibacterium prausnitzii SL3/3]
          Length = 342

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 73/340 (21%), Positives = 137/340 (40%), Gaps = 39/340 (11%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             ++ L+ V    +   ++       Y + + + + I ++ A  L++  G LG L L   
Sbjct: 13  RYLMNLVLVGLLFVGLSYVTGNMLSTYQNKVLLTVGINIILAVSLNVATGYLGQLPLGHA 72

Query: 72  IAYAIGAYSYVILGSRYGLS----IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
              A+GAY+  +      L       + + ++ +I+G  G+++G+P+L+  GDYLAI TL
Sbjct: 73  GFMAVGAYACALFTKSSNLPKGVAFAIGLVLAWVIAGLFGVLIGIPALRLTGDYLAILTL 132

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              EI +  L     +                         F+       I +   +  +
Sbjct: 133 GFGEIIRITLNNIDDVLG--------------------FKLFYGSKGLKNIPKYSNFTNV 172

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++  +I  + ++    A   IRDN+ A  S      + K+ AFA S+AF G+AG 
Sbjct: 173 FLCVVITCFLIHAMMKSRHGRAVLAIRDNEIAAESCGIQTTYYKVMAFAFSAAFAGLAGG 232

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A     ++P  F F ++I ++ +V+LGGM S+     +  +L  + E       Y   
Sbjct: 233 LYACYIGVLNPSTFGFMKSIEILVMVVLGGMGSMLGSILSATVLTILPEATRSFESY--- 289

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  + L L+++ R   LL     S 
Sbjct: 290 ------------RMVVYSLVLVLMMIFRPGGLLGSYDFSL 317


>gi|226356408|ref|YP_002786148.1| branched-chain amino acid ABC transporter permease [Deinococcus
           deserti VCD115]
 gi|226318398|gb|ACO46394.1| putative Branched-chain amino acid ABC transporter, permease
           component [Deinococcus deserti VCD115]
          Length = 357

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 63/298 (21%), Positives = 127/298 (42%), Gaps = 15/298 (5%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
            I+I+ +   GL++  G  GL+++       +GAY+  +  +R  L  +L IP+  +   
Sbjct: 56  MIMIFAVAVLGLNVTTGYTGLINIGQAAFMGVGAYATALAATRLNLPFFLAIPLGGLAGA 115

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
             G  +GLPSL+ +  YLA+ATL    IF+  +               +  L   G    
Sbjct: 116 LVGTFVGLPSLRLKYLYLAVATLAFQIIFEWTV-------------GHSPLLAQGGAISM 162

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
             ++ F    +F+ + +F YY++L +    A +   + RT    +   +RDN +A  ++ 
Sbjct: 163 PTVQIFGIRDTFLNHNMFWYYIILPVLVAMALLWRNVLRTRHGRSMIAVRDNDRAAAAMG 222

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                AKL+AF + S + G+AG  FA  +  +  + +    ++ ++++ I+GG+ SL   
Sbjct: 223 INPGTAKLTAFMIGSFYAGIAGGLFAYFQKAVVIEDYGLHTSVQLLAMAIVGGLGSLPGS 282

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCS--FNMRHTTLMVIALFLVILMRSHSLL 340
                 ++ +       + +     +                 +A+ L ++     L 
Sbjct: 283 FLGPIFIVALDRFMGSASSWLGEKDIFPQGIDVATAMRPLAFGLAIMLFLMFEPRGLA 340


>gi|145595663|ref|YP_001159960.1| inner-membrane translocator [Salinispora tropica CNB-440]
 gi|145305000|gb|ABP55582.1| inner-membrane translocator [Salinispora tropica CNB-440]
          Length = 390

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 147/376 (39%), Gaps = 56/376 (14%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATK---------------SQKYIDSMGIQILIYVM 51
           R  ++  +L  +A +Y L     +  T                +      +     +YV+
Sbjct: 28  RWQRWLTLLAGIAFLYYLPFLGDIPGTNLIIPGLDWFRTDSIDAGANWAGVLFVCALYVL 87

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-----------------GSRYGLSIWL 94
            A GL++V+G  GLL L  V  YA+GAYS  +                     + +   +
Sbjct: 88  VAIGLNVVIGLAGLLDLGYVGFYAVGAYSVALFGSAESPVVRALQEQFGLSQDWAIGWAI 147

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
            IP++   S   G+++G P+L+ RGDYLAI TL   EI + +                 +
Sbjct: 148 CIPIALAFSLVAGVLLGWPTLRLRGDYLAIVTLGFGEIIRIVAKNSAW---------AGE 198

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                G                ++     Y++ L +  L   ++  L  + +  +W  IR
Sbjct: 199 AQGVPGIPGPEGPPSADNRFFGLLDIKPWYWLALSVVLLMVLLVRRLEHSRVGRSWLAIR 258

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           +++ A   +       KL AFA+ +A  G +G  FA+    I P+ F    +I+ +++V+
Sbjct: 259 EDEDAAAVMGVYPFKFKLWAFAIGAALGGFSGLLFASRSTFIQPETFNVQLSILFVAMVV 318

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +GG  +++ +A    +L  + E       Y                     +AL L++L+
Sbjct: 319 VGGSGNMAGVALGAFLLAYLPERFRDFAEY---------------RVLAFGLALVLIMLL 363

Query: 335 RSHSLLRLRTPSNFLE 350
           R   LL  R  +  L+
Sbjct: 364 RPQGLLPSRRRTRELQ 379


>gi|320538312|ref|ZP_08038193.1| amino acid or sugar ABC transport system, permease protein
           [Treponema phagedenis F0421]
 gi|320144811|gb|EFW36546.1| amino acid or sugar ABC transport system, permease protein
           [Treponema phagedenis F0421]
          Length = 332

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 68/337 (20%), Positives = 135/337 (40%), Gaps = 35/337 (10%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +     +V  ++   F+       Y   +     I  + A  ++I+ G  G LSL 
Sbjct: 9   RSIGLSIAALLVLVVMPGFFIKNGIIDPYTAQILTLAAINAIAAISVNIICGLTGQLSLG 68

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                AIGAY  +       + +   I  +A+++   G ++G P L+  GDYLAI TL  
Sbjct: 69  QAGFMAIGAYFLIWFYETCVIPLPAAIVAAALVAAVAGFVIGFPVLQLTGDYLAIVTLGF 128

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            EI + +   +K  T G  G                     R  S   +   + ++ +  
Sbjct: 129 GEIIRVVFTNFKSFTGGPNG--------------------KRITSILTVMPEYAWFAIAS 168

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L   ++    ++    A   +R+++ A  S   ++   K+ +F  ++   G+AGA +
Sbjct: 169 VLALVIIVLYNGMKSPYGRAVLAVREDEIAANSCGISVFRYKMGSFIFAAFVAGLAGALY 228

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A     + PD+  F++++  +  V+LGG+ +++    A  +L  + EL   +  +     
Sbjct: 229 APFLGFVKPDIASFNKSVDFLIFVVLGGIGNITGSIIAAFVLTYLQELLRFLQEF----- 283

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                        +  + L +V+L R   LL  +  S
Sbjct: 284 ----------RLLIYPMLLIIVMLFRPQGLLGSKELS 310


>gi|295102252|emb|CBK99797.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           (TC 3.A.1.4.-) [Faecalibacterium prausnitzii L2-6]
          Length = 343

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 71/316 (22%), Positives = 130/316 (41%), Gaps = 39/316 (12%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---- 91
             Y + + + + I ++ A  L++  G LG L L      A+GAY+  +      L     
Sbjct: 37  STYQNKVLMTVGINIILAVSLNVATGYLGQLPLGHAGFMAVGAYTCALFTKYSPLPDGVS 96

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             + + + A+++G  G+++G+P+L+  GDYLAI TL   EI +  L     +        
Sbjct: 97  FAIGLALGAVMAGLFGVLIGVPALRLTGDYLAILTLGFGEIIRITLNNIDDVLG------ 150

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                            F+       I +   +  +     ++  +I  + ++    A  
Sbjct: 151 --------------YSLFYGSKGLKNIPKYSNFANVFLCVVITCFLIHAMMKSRHGRAVL 196

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            IRDN+ A  S      + K+ AFA S+AF G+AG  +A     ++P  F F ++I ++ 
Sbjct: 197 AIRDNEIAAESCGIQTTYYKVMAFAFSAAFAGLAGGLYACYIGVLNPSTFGFMKSIEILV 256

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +V+LGGM S+     +  +L  + E     + Y                  +  + L L+
Sbjct: 257 MVVLGGMGSMLGSILSATVLTILPEATRSFDSY---------------RMVIYSLVLILM 301

Query: 332 ILMRSHSLLRLRTPSN 347
           ++ R   LL     S 
Sbjct: 302 MIFRPGGLLGSYDFSM 317


>gi|295401398|ref|ZP_06811369.1| inner-membrane translocator [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294976613|gb|EFG52220.1| inner-membrane translocator [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 324

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 72/339 (21%), Positives = 137/339 (40%), Gaps = 42/339 (12%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I   LA+V+ +++ L +       +  +    I I +M A  L +++G  G  S+    
Sbjct: 11  WISIALALVFFVVVQLLISGEMLNSFYINTLFFIAINIMLAVSLHLIIGITGQFSIGHAG 70

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
             A+GAY+  I+  +  +   L +    + +   G+++G+P+L+ +GDYLAIATL   EI
Sbjct: 71  FLAVGAYASAIMTMKLQMPFSLALLAGGIAAAVAGLLIGIPTLRLKGDYLAIATLGFGEI 130

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            + IL+    +                                  +  +  +  +     
Sbjct: 131 VRIILLNVDYVGGAS---------------------------GMTVTHLTTWPWVFACLL 163

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           ++  +I     +    A  +IR+++ A  S+     + K+ AF + + F G+AG  +A  
Sbjct: 164 ITIIVIANFTNSTHGRACISIREDEIAADSMGINTTYYKVVAFVIGAFFAGIAGGLYAHH 223

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              I P  F F ++  ++  V+LGG+ S+S    A  +L  V                  
Sbjct: 224 FYIIQPTNFGFLKSFDILIFVVLGGLGSMSGAVIAAILLTIVSTFLQEY----------- 272

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                     +  + L LV+L R   LL  R  ++F ++
Sbjct: 273 ----PETRMIIYSLVLILVMLYRPKGLLGTRELASFFKQ 307


>gi|254460758|ref|ZP_05074174.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2083]
 gi|206677347|gb|EDZ41834.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 636

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 97/312 (31%), Gaps = 28/312 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLI 96
                   IY + A GL+I  G +G++++       +GAY+  ++          I + I
Sbjct: 347 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQQIIPDHTVSIIVAI 406

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIA-TLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           P++  ++ A G+ M       R  Y     TL+ +     +L +      G     +   
Sbjct: 407 PLAFAVTFAAGVAMERLV--IRWLYSRPLETLLATFGISIVLQQLAKNIFGTQARPLTAP 464

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                      +      +  V        + +      A  +  ++RT +    R +  
Sbjct: 465 ---------GWLDGSWVINDVVSISYIRIAIFVLAFVFLAIFLFIMKRTRLGLETRAVTQ 515

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N +   S+        +  F + S   G+AG          S     +         V++
Sbjct: 516 NPRMAASMGINPGRVNMLTFGLGSGIAGVAGVAIGLFAKVTSELGSDYIVQS--FMTVVV 573

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++       A++  + +     N     +   F   F +                R
Sbjct: 574 GGVGNIWGTLAGAAMIGFLQKGIEWFNPSNTLAAQTFMIVFIIIFIQF-----------R 622

Query: 336 SHSLLRLRTPSN 347
              ++ L+  + 
Sbjct: 623 PRGIIALKGRAA 634


>gi|78355307|ref|YP_386756.1| branched-chain amino acid ABC transporter permease [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|78217712|gb|ABB37061.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 322

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 73/320 (22%), Positives = 139/320 (43%), Gaps = 30/320 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 Y   +   + +Y + A  L+I++G  G+  +     YA+GAY+  +L   + + 
Sbjct: 19  PAFINPYWTDVLNTVGLYAVLALSLNIILGHAGMFHMGHAAFYAVGAYTTAVLNVTFHVP 78

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN-ILIKWKPITNGKAGI 150
           +   +P + +++    +++  P +  RGDYL I T+ + EI +  ++     +T G  GI
Sbjct: 79  VLWAMPAAGVLAALFALVVARPIIHLRGDYLLIVTIGIVEIVRIALVNNIFDMTGGANGI 138

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
           +   R    G  +R  + F              +Y++ G C ++  +  WL  +    A 
Sbjct: 139 FGIARPELFGFKIRKPVHF--------------FYLIWGFCAVTILLFHWLENSRFGRAL 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             IR+++ A           KL AF + + + GMAG  FAA    ISP+ F F E++++ 
Sbjct: 185 NYIREDEVAAEGSGVNTAAYKLGAFVLGAFWAGMAGTLFAAKMTIISPESFSFWESVVMF 244

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +IVILGGM S+  +     +++G+ E+   +                     +   A+  
Sbjct: 245 TIVILGGMGSIRGVLLGAFLIVGLPEVFREL---------------ASARMLVFGAAMVA 289

Query: 331 VILMRSHSLLRLRTPSNFLE 350
           +++ R+  LL        L 
Sbjct: 290 MMIFRTQGLLPPAPRHYDLR 309


>gi|317124778|ref|YP_004098890.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Intrasporangium calvum DSM 43043]
 gi|315588866|gb|ADU48163.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Intrasporangium calvum DSM 43043]
          Length = 581

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 77/343 (22%), Positives = 133/343 (38%), Gaps = 23/343 (6%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L +    + FLF           S+  Q+LI+   A GL+IVVG  GLL L  +     
Sbjct: 232 VLMLGAVAVAFLFPFTQDGSDANMSIATQVLIFASTALGLNIVVGLAGLLDLGYIAFLGA 291

Query: 77  GAYSYVILGSR------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           GAY   +          +  +  +++ + A++S   G+I+G P+L+  GDYLAI TL   
Sbjct: 292 GAYIGAMFSHSAFATIGWKPNFLVVVVIGALVSATLGLIIGSPTLRVSGDYLAIVTLAFG 351

Query: 131 EIFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           EIF+  +             G      +  L     S           +      Y++LL
Sbjct: 352 EIFRLAMGNLDGQDGPKLTNGPNGIPAIPDLEIGGFSFGETHEVLGITLGRFANYYFLLL 411

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +     ++   L  + I   W  IR+++KA  ++       KL AFA  +   GMAG  
Sbjct: 412 LLAAFIITVFTRLNDSRIGRGWIAIREDEKAAEAMGVNTFGLKLFAFAGGAFLAGMAGTI 471

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            A     ++PD + F E+  +++ V+LGGM +++ +     IL  + E    +  Y    
Sbjct: 472 KAHHDVSVTPDQYIFLESAFLLAAVVLGGMGTVAGVLIGATILKLMPEKLRFVADYRLLI 531

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                                 ++  R   ++  +        
Sbjct: 532 FGLLLVL---------------MMRFRPEGIVASKRRQLEFHE 559


>gi|110667576|ref|YP_657387.1| ABC-type branched-chain amino acid transport system, permease
           protein II [Haloquadratum walsbyi DSM 16790]
 gi|109625323|emb|CAJ51745.1| ABC-type branched-chain amino acid transport system, permease
           protein II [Haloquadratum walsbyi DSM 16790]
          Length = 384

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 62/343 (18%), Positives = 131/343 (38%), Gaps = 5/343 (1%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           +  F  R      +  +   ++P +       +       ++   +LI+ +FA G  +++
Sbjct: 27  LQQFREREATVIGLTAIGVALFPWIFARAPVISDLLLGYQNLAALMLIWAIFAIGFDLLL 86

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  GLLS      +   AY   I+  R      +++    + +     ++G  SL+  G 
Sbjct: 87  GYTGLLSFGHAAFWGGSAYVAGIVSLRVSSDPIVMVAAGTIFAVLFAWVLGYLSLRRGGI 146

Query: 121 YLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           Y +I TL  +++   +      P+T G+ G+   D     G+             +  + 
Sbjct: 147 YFSILTLAFAQMLYYMSAAPLAPLTGGENGLTGIDVSPLFGSFHLESELPM---LAGELL 203

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
             +MY  +  +   +  I   +  +     +R IR+N++    +   +   KL AF VS+
Sbjct: 204 GTWMYAFVGVITVAAVGISYRILNSPYGMVFRAIRENEQRAKFVGLNVWRYKLMAFIVSA 263

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            F G+AG+ F      +      ++E+  ++ +V+LGG  SL        + + +  +  
Sbjct: 264 GFAGIAGSLFTIHGSYVPLQSLFWTESGEIVIMVVLGGTASLFGPILGAGLYLYIENIVS 323

Query: 300 GMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           G+       + +     F      L+ +   +VI      L  
Sbjct: 324 GIQQLQVPFTDIVLINDFGTYWHLLLGLIFVVVIWTAPRGLWG 366


>gi|86739059|ref|YP_479459.1| inner-membrane translocator [Frankia sp. CcI3]
 gi|86565921|gb|ABD09730.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Frankia sp. CcI3]
          Length = 470

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 84/331 (25%), Positives = 137/331 (41%), Gaps = 31/331 (9%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      S     SM   I IY + A GL++VVG  GLL L  +  +AIGAY+     S+
Sbjct: 142 IIAPLVVSTAAQQSMVNDIGIYALLALGLNVVVGYAGLLDLGYIAFFAIGAYATAYFTSQ 201

Query: 88  YGLSI--------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
             +          + + P++ +++   G+++G P+L+ RGDYLAI TL   EI   I   
Sbjct: 202 TAMPWHAPFVLNPFFVFPIALVLAALAGVVLGAPTLRLRGDYLAIVTLGFGEIIHLIANN 261

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              ITNG  G +    L          I        + I  +  YY+LL +         
Sbjct: 262 ADNITNGARGAFGVPHLS---------INLLGLGYEWGIDPLPYYYLLLAIIVGVMIAFG 312

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L R+ I  AW  IR+++ A  +     +  KL AFA+ ++  G AG  FA+ +   +P 
Sbjct: 313 RLERSRIGRAWAAIREDEIAAEATGVATLRMKLLAFAIGASVSGFAGVLFASKQFF-NPQ 371

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F    +  V+++VI GGM S   +     +L G+                  D      
Sbjct: 372 SFSLQASFFVVAVVIFGGMGSRLGVVVGAVVLQGIAFYLR-------------DKVPPAD 418

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                   + ++++ R   L+  R     ++
Sbjct: 419 RYIYFGAVIVIMMIFRPQGLVPSRRRRREIQ 449


>gi|153011800|ref|YP_001373013.1| ABC transporter related [Ochrobactrum anthropi ATCC 49188]
 gi|151563688|gb|ABS17184.1| ABC transporter related [Ochrobactrum anthropi ATCC 49188]
          Length = 624

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 61/337 (18%), Positives = 125/337 (37%), Gaps = 13/337 (3%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++ ++A V PL++   +         + +    LI  +   G+ I  G+ G++S  
Sbjct: 5   RRGTVVGIVATVLPLVVAALVAKGFFPGAGERLVTLFLINAVAVIGIGIYSGNSGIISFG 64

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
            V   AIGAY+  +L     +            +    +   L           +  L++
Sbjct: 65  NVGFMAIGAYASGLLTINPIVQ----------KTALPHLPEWLMGWGMPFLPALLVALLV 114

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYF--LGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +    +        G +                V S        + F I      +V 
Sbjct: 115 VALAAIAIGIPVARLGGSSASICTLGFLVIVHVVLVASSDFTRGSQTFFGIPRAVNLWVA 174

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    L+ +I    R +A     R  R++  A  ++   +   +  A+ + +   G AG 
Sbjct: 175 LPFAVLAVAIARIYRDSAAGMKLRASREDDIASTAVGVNVRLHRFLAWVLGAMLSGAAGV 234

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            FA      SP  F F+   ++++++ILGG++++S     TA+++ +VEL   +      
Sbjct: 235 LFAHFIGAFSPKDFYFNLTFMLLAMLILGGISTVSGAVVGTAVIMVIVELLRKLEGGVDL 294

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
            + +    F +    +  +A+ LV+      LL +R 
Sbjct: 295 GVFQLPTVFGLTDIGI-GLAILLVMYRLQDGLLGVRE 330


>gi|23098139|ref|NP_691605.1| branched-chain amino acid ABC transporter permease [Oceanobacillus
           iheyensis HTE831]
 gi|22776364|dbj|BAC12640.1| branched-chain amino acid ABC transporter permease [Oceanobacillus
           iheyensis HTE831]
          Length = 328

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 67/324 (20%), Positives = 136/324 (41%), Gaps = 28/324 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+  L++ +         Y   +     I+++  +GL+I+ G  G LSL     +AIGA
Sbjct: 10  IVIGLLMVAILFPLFTQNNYYIHVMTLSFIWMIAVYGLNILAGYTGYLSLAHAGFFAIGA 69

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L  +  +  WL + ++ +I+   G  +GL +L+ +  + AI TL +  +   ++ 
Sbjct: 70  YALGLLTVKAEVGFWLALILAPIITTIIGFGIGLIALRTKEHFFAIYTLCVGYVIYLLID 129

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           KW  +T G  G+                              I  YY +L +   S  +I
Sbjct: 130 KWDSLTEGVRGLMGIPLPSD-------------IGPISFESNIAQYYFILIVLLFSIFVI 176

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +  + +      IR++++   SL  +    KL AF +S+ F G+AGA +A+    + P
Sbjct: 177 YRIVNSIVGKKLIAIRNSEQLALSLGISTKKNKLLAFVLSTFFAGLAGALYASFIRFLGP 236

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           D+   +    ++  +I+GG+ +LS     T +++ + +    +  Y              
Sbjct: 237 DIGSTNITFDLLMYLIVGGIGTLSGPIIGTLLVVWLSQNLQFLQDY-------------- 282

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
               +    L L+I+     ++ +
Sbjct: 283 -RMLIFGPLLALLIIFSPRGIVGM 305


>gi|33597387|ref|NP_885030.1| putative ABC-transporter permease component [Bordetella
           parapertussis 12822]
 gi|33573814|emb|CAE38122.1| putative ABC-transporter permease component [Bordetella
           parapertussis]
          Length = 318

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 68/332 (20%), Positives = 131/332 (39%), Gaps = 24/332 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++    L           Y   +G  I +  +   G+ I+ G  G +SL       IG Y
Sbjct: 10  LIVLAALIAIAPLFFPSGYYFRVGSTIFVNALAVTGIVILTGYAGQISLGHAGFAGIGGY 69

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  +     GL   L + + A +SGA   ++G P L+ +G YL +A+L    +   +L  
Sbjct: 70  ACALAPVHLGLPSALSVVLGAAVSGALAWLVGRPILRLKGYYLGVASLGFGILVAMVLNN 129

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
            + +T G  GI V D          SL               F Y +      + A + L
Sbjct: 130 ERQLTKGPDGIAVPDPGLRSLLKGWSLDLSNGQ---------FWYAMTGIALVIGAWLAL 180

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  +    A R +  ++ A  ++   +  AKL AF VS+ +  ++G+  A     I+PD
Sbjct: 181 NLYHSPTGRALRALHGSEIAAGTVGIDVAGAKLKAFVVSAVYASVSGSLLALQNRFITPD 240

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  F  +I ++++ +LGG+ S++      ++L  + ++      Y               
Sbjct: 241 IAGFMHSIEMVTMAVLGGVGSVAGAIFGASLLTLLPQVLTVFADYEP------------- 287

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
              ++ + + LV++     L+     +    +
Sbjct: 288 --LILGLTMMLVMIFLPEGLVPSIMRTIRGRK 317


>gi|225387382|ref|ZP_03757146.1| hypothetical protein CLOSTASPAR_01135 [Clostridium asparagiforme
           DSM 15981]
 gi|225046514|gb|EEG56760.1| hypothetical protein CLOSTASPAR_01135 [Clostridium asparagiforme
           DSM 15981]
          Length = 352

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 60/326 (18%), Positives = 120/326 (36%), Gaps = 24/326 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + V   LL F+ + A     Y+ ++ +        +   +++ G  G  SL       
Sbjct: 14  LAILVGLVLLTFILIPAMVKSPYMLNIFVLTFYMSTLSMAWNLLGGMTGQNSLGHAAYMG 73

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY+  +L  + G + WL      ++ G    I+  P    RG Y  + ++   E  + 
Sbjct: 74  LGAYACCLLVVKTGANPWLAAIFGMVVVGLVAGIVFYPCFILRGPYFTLVSIAFGESIRQ 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           ++I  +             +  +L     S              ++  YYV L M     
Sbjct: 134 VIINSEFFGRASGVGLPFGQDSWLNFRFAS--------------KVPYYYVGLAMMVGIY 179

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I+  + R+ +  A +TIR+++ A  ++       K+ A  +S+   G+ G F+A+    
Sbjct: 180 LIMKKIDRSKMGFALKTIREDEDAAAAIGINPTKYKIMAVVISAMVAGLVGFFYASYIRY 239

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           I PD+   +++   +   ++GG   +        I+I + E               F   
Sbjct: 240 IDPDLMIQAKSTESVLPAVVGGAAFVEGPIVGGLIMIPLSEYLRA----------NFSAV 289

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
               +  +  + L  VI  R   +L 
Sbjct: 290 LPGINMLMYAVVLLAVIRFRPSGVLG 315


>gi|217969939|ref|YP_002355173.1| ABC transporter [Thauera sp. MZ1T]
 gi|217507266|gb|ACK54277.1| ABC transporter related [Thauera sp. MZ1T]
          Length = 597

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 93/306 (30%), Gaps = 13/306 (4%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y  ++   I +Y M A GL ++ G  GL S        +GAY+   L +   L  WL 
Sbjct: 23  SPYYVTLLNYIGLYAMVALGLVLLTGVGGLTSFGQAAFVGLGAYTTAALTTATDLPGWLA 82

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
              ++        ++    +      L +           I                   
Sbjct: 83  WAGTSPWLTLAVGLLLTALVAVLIGSLTLKLSGHFLPLGTIA------WGISLYFLFGTM 136

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
               G T  S I         +     +YY++     ++      L  +    A R ++ 
Sbjct: 137 ESLGGHTGISGIPAIGLLGWTLDEGGEIYYLIWAFLLVAMLTTHNLLDSREGRAIRALKG 196

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
            +    ++      +++  F +++     +G  +A  +  ++P  F     I  + + ++
Sbjct: 197 GRVMAEAMGVDTSRSRMVIFVIAALLACASGWLYAHMQRFVNPTPFGVHIGIEYLFMAVV 256

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG   +        ++  + +           +   F        T +  + + LV+   
Sbjct: 257 GGAGYVWGAIVGAGVITVLKQWLQNWLPSLLGATGNF-------ETIVFGLLMVLVLHRA 309

Query: 336 SHSLLR 341
              L  
Sbjct: 310 REGLWP 315


>gi|293603961|ref|ZP_06686375.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292817654|gb|EFF76721.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 612

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/325 (15%), Positives = 115/325 (35%), Gaps = 22/325 (6%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L  V+ ++L        + ++  +    I +  +   GL ++ G  GL S        +
Sbjct: 4   ILLAVFIVVLAGLPLVPVTPEFWVTQLNYIGLASLVVLGLVLLTGVGGLTSFGQAAFVGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+   L ++Y +S WL +P   +++     ++G  +L+  G YL + T+        +
Sbjct: 64  GAYTTAYLTTQYDVSPWLALPAGLILTAVVAYLLGAITLRLSGHYLPLGTIAWGLSLYFL 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                 +     GI   + L                    +     +YY++     L+  
Sbjct: 124 FGNIDWL-GKHDGIAGIEPLSLF--------------GISLASGRNIYYLIWVFVLLALW 168

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               L  +    A R ++       S+       K+  F  ++    ++G  +A  +  +
Sbjct: 169 ATRNLLNSRPGRAIRALKSGAGMAESMGVNTAAYKVVIFVWAALLACISGWLYAHMQRAV 228

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP  F  +  I  + + ++GG   +      + +++ + +          ++   F    
Sbjct: 229 SPSPFGVNYGIEYLFMAVVGGAGYVWGALLGSGVILVLKDQLQNWLPKLLDTNANF---- 284

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 +  + L L++    + L  
Sbjct: 285 ---EMIVFGVLLILMLQYARNGLWP 306


>gi|317126246|ref|YP_004100358.1| inner-membrane translocator [Intrasporangium calvum DSM 43043]
 gi|315590334|gb|ADU49631.1| inner-membrane translocator [Intrasporangium calvum DSM 43043]
          Length = 335

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 61/284 (21%), Positives = 118/284 (41%), Gaps = 8/284 (2%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V    L +         YI  +    +I+ + A  L++V+G  GLLS+       +G Y+
Sbjct: 13  VAVFALLIAAPWFVPSAYIFHLATMSVIWSITAVALNLVMGYTGLLSVAHGALAIVGGYT 72

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +L      + WL   +  +++   G ++G+ +L+ RG Y AI+TL    +   +L KW
Sbjct: 73  SSLLVVNASANFWLSFLIGGVVAAISGFLLGVLTLRLRGHYFAISTLAFGIVVGLVLEKW 132

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T G  GI                +      S  +  ++  Y+  + +  ++  ++  
Sbjct: 133 ESVTGGARGITYIPPA--------PSVPLPGGGSLGLDSDLAKYFFAVALLAITVLVVRN 184

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +  +    A   IR N     S    ++  KL AF +S+   G+AG  +A     +SP+ 
Sbjct: 185 IVDSRFGRALAAIRSNDLVARSQGVDVVRHKLIAFTISAFMAGLAGTVYATYLAYLSPND 244

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
                +  ++  V+LGGM +       +  ++ V E     + Y
Sbjct: 245 ASLWTSFFILMYVVLGGMGTTWGPILGSFFVVMVPEWLRLFDEY 288


>gi|237653603|ref|YP_002889917.1| ABC transporter [Thauera sp. MZ1T]
 gi|237624850|gb|ACR01540.1| ABC transporter related [Thauera sp. MZ1T]
          Length = 604

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 105/332 (31%), Gaps = 31/332 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+   +  L +       +  ++   I +Y M A GL ++ G  GL S        +GA
Sbjct: 9   LVMAAFVALLAVAPLVLSAFYVTLLNYIGLYAMVALGLVLLTGVGGLTSFGQAAFVGLGA 68

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL---------PSLKFRGDYLAIATLIM 129
           Y+  +L +   L  WL     +        ++            +L+  G YL +AT+  
Sbjct: 69  YTTALLTTSAELPGWLAWAGGSPWLALLVGLVLTVVVAFLIGKLTLRLSGHYLPLATIAW 128

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 +      +  G  G+     +   G  +R                  +YY++  
Sbjct: 129 GLSLYFLFGTMGFL-GGHTGLTGIPPISLFGYELRQGEE--------------VYYLVWL 173

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
                      L  +    A R ++       ++      +++  F +++     +G  +
Sbjct: 174 FVLAGVLTTSNLLDSREGRAIRALKGGMVMAEAMGVDTARSRMVIFILAALLACASGWLY 233

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A  +  ++P  F     I  + + ++GG   +        ++  + +    +    F + 
Sbjct: 234 AHMQRFVNPTPFGLHIGIEYLFMAVVGGAAHVWGALVGAGVITVLKQWLQDLLPKLFGTS 293

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             F             + + LV+      L  
Sbjct: 294 GNF-------EVIFFGVLMVLVLHKARGGLWP 318


>gi|119025463|ref|YP_909308.1| permease of ABC transporter for branched-chain amino acids
           [Bifidobacterium adolescentis ATCC 15703]
 gi|118765047|dbj|BAF39226.1| permease of ABC transporter for branched-chain amino acids
           [Bifidobacterium adolescentis ATCC 15703]
          Length = 373

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 76/341 (22%), Positives = 138/341 (40%), Gaps = 42/341 (12%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  VV   +L     +  +  YI  + +   I ++    L++ +G LG L+L C    A
Sbjct: 16  AVGIVVLFGILMGVCESGMASTYIKGIMMTSCIAIIMTTSLNLTIGVLGQLTLGCCGFEA 75

Query: 76  IGAYSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           IGAYS  +         +     L   L      +++   G+++G+P+L+  GDYLAI T
Sbjct: 76  IGAYSAALLSKLLVANGVAMDPTLRFLLTTLAGGVVACIFGILVGIPALRLHGDYLAIIT 135

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + I+   K                        L +     +   I  +   YV
Sbjct: 136 LGFGEIIRVIIQNLKVAGG------------------MGLDKGAAGQALIGIDRLANLYV 177

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  ++  ++    R+    A + IRD++ A  +    I + K+  FA+S+ F G+AG
Sbjct: 178 VFWITVVTVVLLFMFARSRYGRAVKAIRDDEIAASASGINITYMKVLVFAISAFFAGIAG 237

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             FA     ++P M  + ++I  + +V+ GGM SL+    +   L  + EL    + Y  
Sbjct: 238 GIFAQYIGSLNPAMAGWLQSINYVIMVVFGGMGSLTGSIVSAIALTILPELLRAFSTY-- 295

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                           +  +AL L+++ R   +      S 
Sbjct: 296 -------------RMLVYSVALVLIMIFRPQGIFGNWEFSL 323


>gi|33602127|ref|NP_889687.1| putative ABC-transporter permease component [Bordetella
           bronchiseptica RB50]
 gi|33576565|emb|CAE33643.1| putative ABC-transporter permease component [Bordetella
           bronchiseptica RB50]
          Length = 318

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 67/332 (20%), Positives = 132/332 (39%), Gaps = 24/332 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++    L           Y   +G  I +  +   G+ I+ G  G +SL       IG Y
Sbjct: 10  LIVLAALIAIAPLFFPSGYYFRVGSTIFVNALAVTGIVILTGYAGQISLGHAGFAGIGGY 69

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  +     GL   L + + A +SGA   ++G P L+ +G YL +A+L    +   +L  
Sbjct: 70  ACALAPVHLGLPSALSVVLGAAVSGALAWLVGRPILRLKGYYLGVASLGFGILVAMVLNN 129

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
            + +T G  GI V D           L    +     +    F Y +      + A + L
Sbjct: 130 ERQLTKGPDGIAVPDP---------GLRSLLKGWGLDLSNGQFWYAMTGIALVIGAWLAL 180

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  +    A R +  ++ A  ++   +  AKL AF VS+ +  ++G+  A     I+PD
Sbjct: 181 NLYHSPTGRALRALHGSEIAAGTVGIDVAGAKLKAFVVSAVYASVSGSLLALQNRFITPD 240

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  F  +I ++++ +LGG+ S++      ++L  + ++      Y               
Sbjct: 241 IAGFMHSIEMVTMAVLGGVGSVAGAIFGASLLTLLPQVLTVFADYEP------------- 287

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
              ++ + + LV++     L+     +    +
Sbjct: 288 --LILGLTMMLVMIFLPEGLVPSIMRTIRGRK 317


>gi|317154544|ref|YP_004122592.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2]
 gi|316944795|gb|ADU63846.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2]
          Length = 348

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 68/322 (21%), Positives = 125/322 (38%), Gaps = 16/322 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V   ++ L         +  S+   I I V+ A GL+++ G  G +SL       +GA
Sbjct: 26  LMVGLFVVALLAAPMALSIHHTSIMNLIFISVIGAVGLNLLTGVCGQISLGHGAFIGVGA 85

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+             + I    +I+   GM+ G+PSL+ +G YLAIATL    + + + +
Sbjct: 86  YAAGQCSLHGVP-FPMAILAGGLITAMVGMVFGIPSLRLKGIYLAIATLAAQLVLEYVFL 144

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +T G +G+ +                               YY+L      +  ++
Sbjct: 145 HGGALTGGSSGLLLEPPRILGFAFDSEARM---------------YYLLFFFAACALLLV 189

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + RT    A+ +IRD   +   +   + + KL AF VSS   G+AG  +      IS 
Sbjct: 190 SNIMRTKYGRAFVSIRDFHLSAEIVGVNLFWYKLVAFGVSSFLAGVAGGLWGHYTGYISA 249

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F    +I  ++++I+GGM S+         ++ + E    +       L         
Sbjct: 250 EQFNIGLSISYLAMIIIGGMGSVLGSVFGAVFIVLLPEALNVLANGLGGFLPDIAQHLVA 309

Query: 319 RHTTLMVIALFLVILMRSHSLL 340
               +  + L L ++     L+
Sbjct: 310 LREGVFGLVLILFLIFEPEGLV 331


>gi|170290867|ref|YP_001737683.1| ABC-type branched-chain amino acid transport system, permease
           component [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174947|gb|ACB08000.1| ABC-type branched-chain amino acid transport system, permease
           component [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 317

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 89/321 (27%), Positives = 144/321 (44%), Gaps = 29/321 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
           Y L   L L    +  YI  + I I++Y + A  L I+VG  G LSL     YAIGAY+ 
Sbjct: 16  YALAFILLLPLPLAGDYITHIAIMIMLYSITAASLDILVGYTGRLSLGHAAFYAIGAYTS 75

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +L     ++ W+ I +  +++   G+I+G+PSLK +G YLAI+TL    I Q +LI   
Sbjct: 76  TLLSMNLNVNPWIGIIIGGILASIFGLILGIPSLKLKGPYLAISTLGFGVIVQLMLINLD 135

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +TNG  GI     L      +R               +   YYV L +  LS   +  L
Sbjct: 136 WLTNGPIGIPNIPPLPGGPIDLR--------------IKSSFYYVALILTLLSIFFLHLL 181

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            ++ +      IR+++ A  S+   + F K+ AF +++ F G++G  +A     ISP M 
Sbjct: 182 TKSRVGKILVAIREDEDAALSVGVNVSFFKIFAFIIATFFAGLSGGLYAHYIRYISPAMS 241

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             SE+I ++S+ I+GG  +L       A+L  + E+      Y                 
Sbjct: 242 ALSESINILSMTIIGGFGTLVGPLMGAALLTILQEVLRPYLEY---------------RY 286

Query: 322 TLMVIALFLVILMRSHSLLRL 342
            +    + +V+      +  L
Sbjct: 287 LIYGGLIVVVMKFFPSGIYGL 307


>gi|282600843|ref|ZP_05979870.2| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Subdoligranulum variabile DSM 15176]
 gi|282571104|gb|EFB76639.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Subdoligranulum variabile DSM 15176]
          Length = 358

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 79/334 (23%), Positives = 144/334 (43%), Gaps = 22/334 (6%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  K + I   + + + +++     A           + I  YV+ A  L++ VG LG L
Sbjct: 8   RSTKSNLITFGIVIAFYIVVQALSAAGLLSNSFSGQLVPICAYVIMAVSLNLTVGILGEL 67

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIW------LLIPVSAMISGACGMIMGLPSLKFRGD 120
           SL      ++GA+S  ++      S+       L   V  +++G  G ++G+P L+  GD
Sbjct: 68  SLGHAGFMSVGAFSGTLVWVSINSSMPQPLALLLSFVVGGLVAGIFGFLVGVPVLRLSGD 127

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLAI TL   EI +N++     +     G++ + +           +          I +
Sbjct: 128 YLAIVTLAFGEIIKNVM-NACYLGVDANGLHFSLKDASSLNMEDGKVLINGAQGITGITK 186

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
              + + + +  L+  +IL L  +    A  +IRDN+ A  S+   I   KL AF  S+ 
Sbjct: 187 ASSFTIGIVLVILTLLVILNLVNSRAGRAITSIRDNEIAARSVGIPITKYKLMAFVTSAV 246

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           F G+AG  ++ +   +    F ++ +I+++  V+LGG+ +L     A AIL  + E+   
Sbjct: 247 FAGIAGVLYSLNYSSLVAKKFDYNTSILILVFVVLGGIGNLRGSVIAAAILTVLPEMLRS 306

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           MN Y                  +  I L +V++ 
Sbjct: 307 MNDY---------------RMLIYAIVLIVVMIF 325


>gi|163855965|ref|YP_001630263.1| putative branched-chain amino acid transport system protein
           [Bordetella petrii DSM 12804]
 gi|163259693|emb|CAP41994.1| putative branched-chain amino acid transport system protein
           [Bordetella petrii]
          Length = 596

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 66/325 (20%), Positives = 124/325 (38%), Gaps = 28/325 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            + ++     +L         Y   +   +L++  F    +++ G  GL+S      + +
Sbjct: 7   FVIMLAVAAAYLGAALLVDNSYHQLIFTLVLVWACFGLSWNMLSGYTGLVSFGHAAFFGL 66

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+ V+     GLS WL+IP++A+I    G+++GLP+ + RG Y A+A L        +
Sbjct: 67  GAYAAVLGQINLGLSPWLMIPLAAVIGAVAGLLVGLPTFRLRGHYFALAMLAYPLALLYV 126

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                                        ++R                 V + M  L   
Sbjct: 127 FEWLGY-----------------QEVTFPMVRENPAWFMQFSNPWLYTVVAMAMLLLFVQ 169

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           I  ++ RT    A   I+ N+ A  +     +  KL A A+S A  G  GAF+A     +
Sbjct: 170 ITRYVERTRFGMALIAIKQNEAAAEAAGIDTLRWKLKAIALSGAIAGATGAFYAVVLLVV 229

Query: 257 SPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +P   F    +   +++ + GG+ ++       AILI + E+             +   +
Sbjct: 230 TPVSVFGMLVSAQALTVAMFGGVGTVWGPIIGAAILIPLGEILHA----------ELGAT 279

Query: 316 FNMRHTTLMVIALFLVILMRSHSLL 340
           +      ++  A+  VIL+    + 
Sbjct: 280 YPGIQGVILGAAIIAVILVAPEGVF 304


>gi|225175946|ref|ZP_03729938.1| inner-membrane translocator [Dethiobacter alkaliphilus AHT 1]
 gi|225168534|gb|EEG77336.1| inner-membrane translocator [Dethiobacter alkaliphilus AHT 1]
          Length = 294

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 83/307 (27%), Positives = 136/307 (44%), Gaps = 41/307 (13%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y   +   + I ++    L+IV+G  GLLSL      +IGAY+  IL   Y +  +  
Sbjct: 3   SAYYTQILTLVGINIILVASLNIVIGYTGLLSLGHAAFMSIGAYTASILTVYYDVPFFAA 62

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +   A+ +   G+I+GLP+LK RGDYLAIATL   EI + I+I  + IT G  G+    R
Sbjct: 63  LLAGALFASVFGIIIGLPTLKLRGDYLAIATLGFGEIVRIIIINME-ITRGPLGLTGIPR 121

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                        +++     LS  +   L+R+ +  A   IR+
Sbjct: 122 HT-------------------------SLWLVYLFVILSLLVFYRLKRSRVGRAMIAIRE 156

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  ++     + K++AFAV++ F G AG  FA     I+P+ F F  +I ++ +V+L
Sbjct: 157 DETAAEAMGINTTYYKVTAFAVAAFFAGTAGGLFAHYFRYINPNNFGFMRSIEILVMVVL 216

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM ++        +L    E+   +  Y                  +   AL  ++L+R
Sbjct: 217 GGMGNMVGSVVGATVLTAAPEMLRAVADY---------------RMLIYGAALVAMMLIR 261

Query: 336 SHSLLRL 342
              LL  
Sbjct: 262 PQGLLGE 268


>gi|260426838|ref|ZP_05780817.1| branched-chain amino acid ABC transporter, permease protein
            [Citreicella sp. SE45]
 gi|260421330|gb|EEX14581.1| branched-chain amino acid ABC transporter, permease protein
            [Citreicella sp. SE45]
          Length = 1065

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 53/310 (17%), Positives = 123/310 (39%), Gaps = 34/310 (10%)

Query: 32   ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
               +++++ ++ + ++I+ +FA  L  ++GS GL+S      +  GAY+  +L       
Sbjct: 772  PVFAEQFVMTLIVDMIIFALFAASLHFILGSGGLVSFGHAAFFGGGAYAAALLVYHTDTP 831

Query: 92   IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            + L    + + +G   + +G   ++  G Y A+ TL  S++  ++  +W+ +T G  G+ 
Sbjct: 832  MELAFLFAPLAAGLLALAIGWFCIRLTGVYFAMLTLAFSQLVWSVAFQWRDVTRGDDGLV 891

Query: 152  VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                  +                  +      YYV L +       +  +  +    A R
Sbjct: 892  NIWPAEW------------------LNAPAPFYYVTLALGVGGIVFLRHVIHSPFGYALR 933

Query: 212  TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
              RD+ +   +    +   + +AFA++ A  G+AG  F  S+  + P   +  E+   + 
Sbjct: 934  AGRDSPRQAEATGIDVKRVQYAAFALAGAMAGLAGGLFVFSKGSVFPTTLEIGESFDALI 993

Query: 272  IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
            +V LGG+ +L+        +  V +    +                     L+ + +  V
Sbjct: 994  VVFLGGVKTLAGGVVGAGFMTVVEDWLTRL----------------EYWRLLLGLVIIAV 1037

Query: 332  ILMRSHSLLR 341
            +++    ++ 
Sbjct: 1038 VILMPEGIVG 1047



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 105/315 (33%), Gaps = 29/315 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYG 89
           A    +++  +     ++ + A GLS++ G   +++      Y +GA+  V  +      
Sbjct: 448 AFFLAQFLTGLANAAALF-LVASGLSLIFGVTRIVNFAHGSFYMLGAFIGVTLMEILPGH 506

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +  W  I ++ +  G  G ++ +  L+       +  L+ +     ++     +  G   
Sbjct: 507 VGFWGAILLTGLAVGLIGAVVEMVVLRPIYRAPELFQLVATFGVILVIQDLALMIWGAED 566

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                     G           +         +   ++    F+  ++   + RT +   
Sbjct: 567 RMGPRAPGLRGV----------WRIFGEPVPKYDIVLIAITPFILFALWYLITRTRLGVL 616

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    +++   +L     +     FA+ SA  G+ GA            +  F+    V
Sbjct: 617 VRAATQDREMVGALGVNQAWLFTGVFALGSALAGLGGALQLPKGGA--DLLMDFNIIGAV 674

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             +V++GGM SL     A  ++  +                            LM + + 
Sbjct: 675 FVVVVIGGMGSLPGAFIAAVLISVLNVFGVTY--------------LPQSTLVLMYVVMA 720

Query: 330 LVILMRSHSLLRLRT 344
           +V+++R + LL    
Sbjct: 721 IVLIVRPYGLLGREE 735


>gi|220923657|ref|YP_002498959.1| ABC transporter-like protein [Methylobacterium nodulans ORS 2060]
 gi|219948264|gb|ACL58656.1| ABC transporter related [Methylobacterium nodulans ORS 2060]
          Length = 603

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 70/313 (22%), Positives = 125/313 (39%), Gaps = 26/313 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                  ++  + I I ++   +   +IV G  G LSL   I Y IGAY  VIL     +
Sbjct: 38  PVALDNAFVYHVFITICVFAALSTAWNIVGGFTGQLSLGHGIFYGIGAYCGVILMGMG-I 96

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S WL +   A +S    + +  P  + RG + ++AT+   E+F+ + + ++ IT G  G+
Sbjct: 97  SPWLGMFAGAALSVLVAVAISYPCFRLRGPFFSLATIAFLEVFRVLALHFREITGGATGL 156

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +  +L +     R                +    +  GM  ++  +  ++R   +    
Sbjct: 157 MIPLKLGWEWMVFRER--------------LPQLAIAFGMLLVTLGVAWFVRWRRLGYYL 202

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DMFKFSENIIV 269
              R+   A  +     +  +L A +VS A   M G F A     I P  MF  + +I +
Sbjct: 203 VATRERASAAQAAGVDTVRVRLIAVSVSGALTAMVGTFHAMYLTFIEPAAMFSLTLSIQI 262

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
               ++GG+ ++        +L+ + EL  G        L  F          +  I L 
Sbjct: 263 AMFALIGGIGTVFGPLMGAVLLVPITELARGWLGAKALGLHGF----------VYGIVLM 312

Query: 330 LVILMRSHSLLRL 342
           LV+L   + L+ L
Sbjct: 313 LVVLFMPNGLMGL 325


>gi|288871322|ref|ZP_06117218.2| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraE [Clostridium hathewayi DSM 13479]
 gi|288863879|gb|EFC96177.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraE [Clostridium hathewayi DSM 13479]
          Length = 364

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 72/337 (21%), Positives = 141/337 (41%), Gaps = 24/337 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  + + I   + +   +++ + +        +  + + + IY + A  L++ VG LG L
Sbjct: 14  KTTRSNLITYGIVIAAYIIVEILISGGHMSSLMKGLLVPLCIYTIMAVSLNLTVGILGEL 73

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLL-------IPVSAMISGACGMIMGLPSLKFRG 119
           SL       +GA++  +       +I +        I V A  + A G+++G+P L+ RG
Sbjct: 74  SLGHAGFMCVGAFASSLFSICMLDTIPIAGIRFTLAILVGAAAAAAAGIVVGIPVLRLRG 133

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           DYLAI TL   EI +N++       +             L       I            
Sbjct: 134 DYLAIVTLAFGEIIKNVVNVIYLGKDSNGIHVSIKNAMALQMQEDGQIIMNGAQGINGTP 193

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
           +   + V + +  ++  I+L L  +    A  ++RDN+ A  S+   I   KL AF +S+
Sbjct: 194 KNATFTVGIILILITLFIVLNLIHSRSGRAIMSVRDNRIAAESIGINITKYKLMAFTISA 253

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSEN--IIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           +  G+AG  ++ +   ++     F  N  I+++  V+LGG+ ++     A  IL  + E+
Sbjct: 254 SLAGVAGVLYSHNLSALTATQKNFGYNQSIMILVFVVLGGIGNIRGSMIAAVILTLLPEM 313

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
             G+N Y                  +  I L ++++ 
Sbjct: 314 LRGLNTY---------------RMLIYAIILIVMMIF 335


>gi|91977601|ref|YP_570260.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91684057|gb|ABE40359.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 411

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 63/349 (18%), Positives = 126/349 (36%), Gaps = 14/349 (4%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++       + LL     ++    +  T        +  +  IY +FA G +I+ G  G 
Sbjct: 1   MKHTSKLADIALLVGFAIVVALGPVIFTPIGAGYPDLLQKFAIYGIFAIGFNILFGLTGY 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           LS        +G+Y+ V       + +   +  S +++G   + +G  SL+  G Y +I 
Sbjct: 61  LSFGHAAFLGVGSYAAVWSFKLLSMDLLPAVAFSVILAGLLALAIGFISLRRSGIYFSIL 120

Query: 126 TLIMSEIFQNILIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           TL  +++  N+      PITNG+ G+ V  +       +   +          I     +
Sbjct: 121 TLAFAQMCYNMAYSVLTPITNGETGLRVLRQDPRHLDAMLGYVSPTPSLLGLPITGWTGF 180

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y+   +   +  + + + R+      R I+ NQ              LSAF +S  F G+
Sbjct: 181 YICGAVLVAAFGVSIAIFRSPFGMTLRAIKSNQNRMGYTGYHTRPYLLSAFVISGMFAGL 240

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA  AA+   +  +  +++ +  V+ + ILGG  +L      T ++     +    N  
Sbjct: 241 AGALLAATDPLVGAERMQWTASGEVVLMTILGGSGTLLGPVLGTGLIKYFENIFSAYNEQ 300

Query: 305 YFNSLLKF-------------DCSFNMRHTTLMVIALFLVILMRSHSLL 340
               +  F                        + +    V+      ++
Sbjct: 301 QLQLIFAFLPDAVRDGVVKTASLFVGEGWQLTLGLLFMAVVCFLPGGIM 349


>gi|296532055|ref|ZP_06894832.1| high-affinity branched-chain amino acid transport system permease
           protein [Roseomonas cervicalis ATCC 49957]
 gi|296267617|gb|EFH13465.1| high-affinity branched-chain amino acid transport system permease
           protein [Roseomonas cervicalis ATCC 49957]
          Length = 601

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 66/310 (21%), Positives = 124/310 (40%), Gaps = 26/310 (8%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
            +  ++  + I I +Y   A   +IV G  G LSL   I Y IGAY+  +     G+S W
Sbjct: 39  INDDFVFHVFITICLYGALATAWNIVGGFAGQLSLGHAIFYGIGAYTAGL-LVPLGISPW 97

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + +   A +S   G+ +GLP  + RG + A+AT+   ++ + + + +  +T G  G+ V 
Sbjct: 98  IGMLAGAALSALLGIGIGLPCFRLRGPFFALATIAFLQVIRLLALHFTGLTGGAVGLMVP 157

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            +  +                           +  G+  L+  +  ++R           
Sbjct: 158 LQTGWQWMIFFERW--------------PSLLIAFGLLTLTLGVAGYIRHARFGYYLVAT 203

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENIIVISI 272
           R+ + A  +     +  +L A A+S+A   M G F       I P+ MF  + ++ +   
Sbjct: 204 REREPAAAAAGVNTLRVRLQAVAISAALTSMVGTFHGMYLTFIEPEAMFSLAFSVQIAMF 263

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           V++GG+ ++      T +++ + EL  G        L  F          +    L L++
Sbjct: 264 VLIGGIGTVLGPLLGTLLVVPLTELARGWLGASALGLHGF----------VYGTVLVLIV 313

Query: 333 LMRSHSLLRL 342
           L     L  L
Sbjct: 314 LFVPDGLAGL 323


>gi|209518785|ref|ZP_03267599.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209500755|gb|EEA00797.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 607

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 78/333 (23%), Positives = 131/333 (39%), Gaps = 29/333 (8%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           N+    +    +   + L   L       Y+        IY + A  L++V G++G +SL
Sbjct: 302 NRRALRIPRRTIAAVVALAFVLPLVVPSSYVLQTLTNGWIYGLLALSLTLVAGTVGQISL 361

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                  IGAY+  +L      S  L IP++ +I+ A G ++  PS + RG Y++IATL 
Sbjct: 362 GHAALLLIGAYASALLSINLAWSPALTIPLAGLITAAIGTVLVYPSFRLRGHYVSIATLG 421

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           + EI   +++ W  +T G  GI     L   G  +  +                +Y+  L
Sbjct: 422 IGEIIGLVVLNWDSLTRGPVGITGIAPLSLFGWQLTGVR--------------AVYWFTL 467

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  L A + + L  + +   WR IR++  A  +        K  AFA      G+ G  
Sbjct: 468 AVLVLLALLQVRLLHSHLGRTWRAIREDDVAARAYGIRPNRYKAIAFACGGLAAGIGGGI 527

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            A     I+   F    +I+ +++VILGG+ S+         LI + EL      Y    
Sbjct: 528 AAHLYSYINYQTFDSQVSILALTMVILGGLGSVIGALAGALALISLPELFRFAADY---- 583

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                         +  + L L++  R   L  
Sbjct: 584 -----------RMLIYGVILLLLVRFRPQGLFG 605



 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 101/309 (32%), Gaps = 25/309 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  I   IY + A GL+++ G   L++      Y +G +   +  +R GL + + +
Sbjct: 6   DYTINGVIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGGFIGWLCLTRLGLPLPVAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +       G+++    L+       IA L+ +     +L +   I  G          
Sbjct: 66  VATVAGCALLGILIERIGLRPLQGAARIAPLLATIGISFVLDQLAQIVFGPDPRP----- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 V S +  +               + +     +  + ++LR T +  A R    +
Sbjct: 121 ------VPSTLPEWTLSIGGATIGSLDLLIAVIGVGAAGVLYVFLRFTRLGWAVRATAQD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +     + FA++    G++G       + I P M  F   +  +  +++G
Sbjct: 175 RDAAQQMGVNVNAVNQAVFAIACGLGGLSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++      + +L  V      +    +  L  F                      R 
Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFVLLLLFLV-------------WRP 280

Query: 337 HSLLRLRTP 345
           + L      
Sbjct: 281 NGLFSASRR 289


>gi|154486890|ref|ZP_02028297.1| hypothetical protein BIFADO_00723 [Bifidobacterium adolescentis
           L2-32]
 gi|154084753|gb|EDN83798.1| hypothetical protein BIFADO_00723 [Bifidobacterium adolescentis
           L2-32]
          Length = 373

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 76/341 (22%), Positives = 138/341 (40%), Gaps = 42/341 (12%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  VV   +L     +  +  YI  + +   I ++    L++ +G LG L+L C    A
Sbjct: 16  AVGIVVLFGILMGVCESGMASTYIKGIMMTSCIAIIMTTSLNLTIGVLGQLTLGCCGFEA 75

Query: 76  IGAYSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           IGAYS  +         +     L   L      +++   G+++G+P+L+  GDYLAI T
Sbjct: 76  IGAYSAALLSKLLVANGVAMDPTLRFLLTTLAGGVVACIFGILVGIPALRLHGDYLAIIT 135

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + I+   K                        L +     +   I  +   YV
Sbjct: 136 LGFGEIIRVIIQNLKVAGG------------------MGLDKGAAGQALIGIDRLANLYV 177

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  ++  ++    R+    A + IRD++ A  +    I + K+  FA+S+ F G+AG
Sbjct: 178 VFWITVVTVVLLFMFARSRYGRAVKAIRDDEIAASASGINITYMKVLVFAISAFFAGIAG 237

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             FA     ++P M  + ++I  + +V+ GGM SL+    +   L  + EL    + Y  
Sbjct: 238 GIFAQYIGSLNPAMAGWLQSINYVIMVVFGGMGSLTGSIVSAIALTILPELLRAFSTY-- 295

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                           +  +AL L+++ R   +      S 
Sbjct: 296 -------------RMLVYSVALVLIMIFRPQGIFGNWEFSL 323


>gi|221636042|ref|YP_002523918.1| leucine/isoleucine/valine transporter permease subunit
           [Thermomicrobium roseum DSM 5159]
 gi|221158070|gb|ACM07188.1| leucine/isoleucine/valine transporter permease subunit
           [Thermomicrobium roseum DSM 5159]
          Length = 557

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 90/329 (27%), Positives = 157/329 (47%), Gaps = 36/329 (10%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             ++L L      +  ++ ++   +  Y++   GL++V+G  GLL L  V  +A+GAY+ 
Sbjct: 232 LVVILLLASVPLWAGLFLSNVADFVGFYILMGLGLNLVLGFAGLLDLGYVAFFAVGAYTM 291

Query: 82  VILGSR-----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
            +L S      + L  W+ +P++ +++   G+++GLP L+ RGDYLAIATL   EI + +
Sbjct: 292 AVLTSPEIGQRFTLDFWVALPIAIVLTVCAGLLVGLPVLRMRGDYLAIATLGFGEIVRLL 351

Query: 137 LIK--WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           ++    KP   G  G+    R       + S   F              Y ++L  C L+
Sbjct: 352 VLSDWLKPYLGGAQGVTRIARPQIGPLRIDSPQEF--------------YVLVLLSCLLA 397

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + + LR + +  AW  IR+++    ++    + AKLSAFA+ ++F G++GA FA+   
Sbjct: 398 WFLSIRLRDSRLGRAWFAIREDEFVAQAMGINRVTAKLSAFAIGASFGGLSGALFASLVG 457

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            + P  F    +I V+++++LGGM SL  +      L+G+ EL      Y          
Sbjct: 458 SVVPASFSLLVSINVVALLVLGGMGSLPGVVVGALALVGIPELLREFQEY---------- 507

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                   +  I L  ++L R   LL  R
Sbjct: 508 -----RLLVYGIVLIAMMLFRPAGLLPER 531


>gi|308050732|ref|YP_003914298.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Ferrimonas balearica DSM 9799]
 gi|307632922|gb|ADN77224.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Ferrimonas balearica DSM 9799]
          Length = 357

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 62/326 (19%), Positives = 131/326 (40%), Gaps = 19/326 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+    +            Y  ++ IQI    + A GL+I+VG  G +SL     +  GA
Sbjct: 30  ALAVAFIALACSAPWVLDAYYLTLFIQISYLGIAALGLNILVGFTGQISLGHGAFFGFGA 89

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           ++   + +++ + +   IP++  ++   GM+ G+P+ + +G YLAIATL    I ++   
Sbjct: 90  FASAWMNTQFNIPVVFCIPLAGFLTMGVGMMFGMPAARIKGLYLAIATLAAQFIIEDFFA 149

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           + +  + G AG        F                         Y++ L          
Sbjct: 150 RAEWFSGGSAGSMAEPVSLFGFAFDTDE---------------SFYFIALFALVFMYLWG 194

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+    A+  +RD+  +   +   +   +L +F +SS + G+ GA +A     +S 
Sbjct: 195 SNLMRSRDGRAFVAVRDHYLSAEIMGVKLNKYRLLSFGISSFYAGIGGALYAHYLGYVSA 254

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG----MNFYYFNSLLKFDC 314
           + F    ++  +++VI+GG+ S+         ++ + E+  G    M    + ++ +   
Sbjct: 255 EGFTILMSVQFLAMVIIGGLGSVKGTLMGCVFMVLLPEVLEGGVGLMKQTEWGNIPQVVD 314

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLL 340
                    + + + L ++     L 
Sbjct: 315 GLAYLKEMAIGLVIILFLIFEPQGLA 340


>gi|322419264|ref|YP_004198487.1| inner-membrane translocator [Geobacter sp. M18]
 gi|320125651|gb|ADW13211.1| inner-membrane translocator [Geobacter sp. M18]
          Length = 300

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 63/315 (20%), Positives = 131/315 (41%), Gaps = 38/315 (12%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           FL         Y+  + + + I ++ A GL+++ G  G LSL      +IGA++  ++  
Sbjct: 4   FLNSLVGSVDPYLMQILVNVGIAIVLALGLNVITGLTGQLSLGHAAFMSIGAFTSAMVTI 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
           + GL     + V+ +++     ++G P L+  GDYLAI TL  +EI +   + ++     
Sbjct: 64  KTGLPFAANLAVTGVVTAIVAAMIGFPILRLTGDYLAICTLGFAEIVKVFFLNFE----- 118

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                                +            I M   +  +  L+  ++ +++ +  
Sbjct: 119 ------------------PTNKALGLTVPAAKTSIPMPIYVWVVAILAIVLVTFVQNSRF 160

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A + IR+++ A  ++       K+ AFA+ S   G+ G  +A     I+P  F F ++
Sbjct: 161 GRALKAIREDEIAADAMGINTAKYKIKAFALGSFMAGVGGGLYAHFLSYINPSDFGFLKS 220

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           + ++++V+LGG+ S+      +++L    E    M+ Y                  +   
Sbjct: 221 VDILAMVVLGGLGSVPGAVIGSSVLASAPEFLRFMSQY---------------RMLVYGA 265

Query: 327 ALFLVILMRSHSLLR 341
            L  +++ R + LL 
Sbjct: 266 LLVFLMVFRPNGLLG 280


>gi|254474868|ref|ZP_05088254.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria sp. R11]
 gi|214029111|gb|EEB69946.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria sp. R11]
          Length = 361

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 71/325 (21%), Positives = 136/325 (41%), Gaps = 17/325 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L V   L+L   +      ++       +LI+ +   GL ++ G  G  SL      AIG
Sbjct: 22  LIVYGALILLALVLPFLINEFYIGEVTNVLIWAIAGLGLMLLTGQTGQASLGHAAFLAIG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  IL  +      L  P++ +I+G  G I+ +P+L+  G YLAIAT+ +S +  +I+
Sbjct: 82  CYTNTILIEQGLP-FLLAFPLAGVITGVVGAIIAIPALRLHGIYLAIATIALSILADDII 140

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +  +P T G +G                +IR F          +  YY++L +  +    
Sbjct: 141 VLLEPWTGGVSGK------------FPDVIRVFGMEIERWTMPVRFYYLVLAVAVMCTLF 188

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              + R+ +  A+  +RD++ +  ++   I   K +AF +S    G AGA         +
Sbjct: 189 YRNILRSPLGRAFAAVRDSEVSATAMGVHIARTKATAFGLSCMITGWAGALMGYYAGAFN 248

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            + F    +I ++ ++++GG+ S+        ++  + +    +      S+L    +  
Sbjct: 249 NETFSLVISITLLMMIVIGGLGSIHGAFFGAVVVAFLPQGLSILKD----SVLGSGVAIP 304

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
              T +  + L L IL     L   
Sbjct: 305 GLETGVFGMILILFILFEPMGLYGR 329


>gi|229823473|ref|ZP_04449542.1| hypothetical protein GCWU000282_00771 [Catonella morbi ATCC 51271]
 gi|229787248|gb|EEP23362.1| hypothetical protein GCWU000282_00771 [Catonella morbi ATCC 51271]
          Length = 319

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 82/340 (24%), Positives = 151/340 (44%), Gaps = 42/340 (12%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R ++ + +    A++   LL+L         Y     I+I+I V++A GL++V+G  G  
Sbjct: 3   RFHQRNFVWLTAALLGYGLLWLLTSTNLIDSYYQITLIKIMIDVIYAIGLNLVLGVAGQF 62

Query: 67  SLNCVIAYAIGAYSYVILGSRYGL--SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           SL      A+GAYS  I  +R+     +W  + V A+++    +++G+P+L+ RGDYLAI
Sbjct: 63  SLGHAAFIAVGAYSGAIFATRHADLGGLWTGMLVGAVVAAVLAVLVGIPTLRLRGDYLAI 122

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           ATL +SEI + ++  +K +TNG  GI                             ++  +
Sbjct: 123 ATLGVSEIIRVVITNYKTLTNGPQGINAIP-------------------------KVATW 157

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            ++     ++  +IL    ++   A   I  ++ A  S+   +   K+ AF + +    +
Sbjct: 158 PLVYFFMVVTTILILNYFYSSAGRATYAIEQDEIAAESMGVNVTKYKVIAFVLGAITAAI 217

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            GA +A +   ++P  F F+++I V+ IV+ GG+ S +    A  +L  +  L       
Sbjct: 218 GGALYAGNIGVVTPGDFTFNKSIDVLIIVVFGGIGSFTGSFVAAVVLGILNTLLQPY--- 274

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                             +  IAL L+++ R   LL    
Sbjct: 275 ------------GQLRMVIYAIALILIMIFRPGGLLGTWE 302


>gi|296122555|ref|YP_003630333.1| inner-membrane translocator [Planctomyces limnophilus DSM 3776]
 gi|296014895|gb|ADG68134.1| inner-membrane translocator [Planctomyces limnophilus DSM 3776]
          Length = 372

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 131/354 (37%), Gaps = 40/354 (11%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L  +   +   FL  ++   Y   + I   I ++ A  L+IV G  G  S+       I
Sbjct: 24  ILVGIALAIGIQFLLPSRVGLYYSRLVIDAGIAMILAVSLNIVNGMTGQFSIGHAGFMTI 83

Query: 77  GAYSYVILGSR------------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           GAY+   +                           +      + +   G ++GLPSL+ R
Sbjct: 84  GAYTAGSITFYSSLLIWGTAAKHGSFLGSGEWMFVIACLCGGITASIAGFVVGLPSLRLR 143

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           GDYLAI TL   EI + +L +   + +    I  A    F    V   I F   P     
Sbjct: 144 GDYLAIVTLGFGEILRVVLQQTGKVVDNAETIRNAPLATFATVPVGGAIGFDGIP----- 198

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
            +  + + +     ++      L+R++   A  ++R+++ A  ++       KL AF  +
Sbjct: 199 -KYTILFWVYAFLAITVIFAYRLKRSSFGRAMLSVREDEIAAQAMGINTSRQKLLAFVTA 257

Query: 239 SAFIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           + F G+ G   A  S   ISP    F  +   + + +LGG  S++ +  A  +L  + E+
Sbjct: 258 AFFAGVGGGLLAHESGVIISPKDAGFQRSFDYVIMTVLGGRGSITGVMLAAILLSALPEV 317

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 Y                  +    L  ++L R   L  +    +F  +
Sbjct: 318 LRDFERY---------------RIIIYAALLIFMMLSRPQGLFGIHEIWDFFPK 356


>gi|160943797|ref|ZP_02091028.1| hypothetical protein FAEPRAM212_01295 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444971|gb|EDP21974.1| hypothetical protein FAEPRAM212_01295 [Faecalibacterium prausnitzii
           M21/2]
          Length = 342

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 74/340 (21%), Positives = 138/340 (40%), Gaps = 39/340 (11%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             ++ L+ V    +   ++       Y + + + + I ++ A  L++  G LG L L   
Sbjct: 13  RYLMNLVLVGLLFVGLSYVTGNMLSTYQNKVLLTVGINIILAVSLNVATGYLGQLPLGHA 72

Query: 72  IAYAIGAYSYVILGSRYGLS----IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
              A+GAY+  +     GL       + + ++ +I+G  G+++G+P+L+  GDYLAI TL
Sbjct: 73  GFMAVGAYACALFTKSSGLPKGVAFAIGLVLAWVIAGLFGVLIGIPALRLTGDYLAILTL 132

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              EI +  L     +                         F+       I +   +  +
Sbjct: 133 GFGEIIRITLNNIDDVLG--------------------FKLFYGSKGLKNIPKYSNFTNV 172

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++  +I  + ++    A   IRDN+ A  S      + K+ AFA S+AF G+AG 
Sbjct: 173 FLCVVITCFLIHAMMKSRHGRAVLAIRDNEIAAESCGIQTTYYKVMAFAFSAAFAGLAGG 232

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A     ++P  F F ++I ++ +V+LGGM S+     +  +L  + E       Y   
Sbjct: 233 LYACYIGVLNPSTFGFMKSIEILVMVVLGGMGSMLGSILSATVLTILPEATRSFESY--- 289

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  + L L+++ R   LL     S 
Sbjct: 290 ------------RMVVYSLVLVLMMIFRPGGLLGSYDFSL 317


>gi|332995570|gb|AEF05625.1| branched-chain amino acid ABC transporter permease [Alteromonas sp.
           SN2]
          Length = 556

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/296 (12%), Positives = 100/296 (33%), Gaps = 21/296 (7%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++   +   I   + ++   +      +G
Sbjct: 281 AAIGLAITFGVMGVINMAHGEMIMLGAYTTYVIQITFPSLIEYSLLMAIPAAFLVSGFVG 340

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           +   +    +L    L      + +L  +      +  +                +    
Sbjct: 341 VLIERGVIRFLKGRPL------ETLLATFGVSLILQQLVRTVFSPLNRQVQAPEWMTGSW 394

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
             +          Y+++    +  +++L L+++++    R +  N+    +L+    +  
Sbjct: 395 VINPVFSLTYNRLYIIIFSLVVFFTLMLILKKSSLGLHVRAVSQNRDMARALSIKSDWVD 454

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
            + F + S   G+AG   +   +         +  I    +V+ GG+ +L     A   L
Sbjct: 455 AATFGLGSGIAGVAGVVLSQLTNV--GPNLGQAYIIDSFLVVVFGGVGNLWGTLVAAMSL 512

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
             + +    +      +              ++++ L L I  R   L   +  S 
Sbjct: 513 GTINKFLEPITGSVLAN-------------IIVLVGLVLFIQKRPKGLFPQKGRSA 555


>gi|116695974|ref|YP_841550.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113530473|emb|CAJ96820.1| ABC-type transporter, permease component: HAAT family [Ralstonia
           eutropha H16]
          Length = 343

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 56/320 (17%), Positives = 125/320 (39%), Gaps = 28/320 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L   +         Y  ++     IY +   GL+++ G  G L+L      AIGAY+ 
Sbjct: 12  LLLAAAIAFPLITPNSYYLTVMTLAFIYAIATLGLNLITGYTGQLNLAHGGFMAIGAYTL 71

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            IL   + +  WL   ++ +I    G ++G+ SL+ +G Y +I T+ +  I   ++ KW+
Sbjct: 72  GILTVDHQVPFWLAFVLAGVICMVLGYVIGVVSLRLKGHYFSIFTMCVGYIIYLLIEKWE 131

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T+G  G+                                 YY++L    +   ++  +
Sbjct: 132 SLTHGTVGLIGIPVPA-------------AIGPLSFDSVQAQYYLVLFFLAVGTFLMHRI 178

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             + +  ++  +R++     +L   ++  K+ +F +S  + G AGA +A     + PD+ 
Sbjct: 179 VTSLLGRSFMAVRNSDALAEALGINLMRTKVLSFVLSVGYAGFAGALYAGQVRFLGPDIA 238

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
           +      ++  +++GG+ ++        ++  + +    M  Y                 
Sbjct: 239 RTDLTFDMVMSMLVGGIGTIFGPLLGAVLVPWITQSLQFMQDY---------------RM 283

Query: 322 TLMVIALFLVILMRSHSLLR 341
            +    L L+I+     ++ 
Sbjct: 284 LVFGPVLILLIIFVPDGIVG 303


>gi|328949248|ref|YP_004366585.1| ABC-type transporter, integral membrane subunit [Treponema
           succinifaciens DSM 2489]
 gi|328449572|gb|AEB15288.1| ABC-type transporter, integral membrane subunit [Treponema
           succinifaciens DSM 2489]
          Length = 338

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 83/335 (24%), Positives = 138/335 (41%), Gaps = 32/335 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I  +   V  +L+ L LG      Y   +     +  + A  ++++ G  G LSL     
Sbjct: 15  IAFVCIAVPAVLMDLPLGMPLIDAYTAQIITLAGVNAIMAISVNVICGITGQLSLGQAGF 74

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            A+GAYS VI+ +  G+ + + I +  +I+   G ++G P+LK  GDYLAI TL   EI 
Sbjct: 75  QALGAYS-VIILTEAGIPLPVSILLGGLIAAFLGFLIGFPTLKLEGDYLAIVTLAFGEII 133

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           +  LI  K IT G  G                      F +S        Y  ++G   +
Sbjct: 134 RVCLINLKSITGGPNG----------------KQFSTIFTTSLDHSAAISYLAVIGSLVV 177

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              ++    R+    A   +R+++ A  S    +   K++ F ++S   G+ GA +A   
Sbjct: 178 IVVLLQNFLRSTYGRAILAVREDEVAANSNGIGVFRYKMTGFVIASFIAGIGGALYAPFI 237

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             I PD+  F+ +I  +  V+LGGM S++    A  +L  + E    +  Y         
Sbjct: 238 GFIKPDLASFNNSINDLIFVVLGGMGSITGGILAAFVLTILQEALRFLRDY--------- 288

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                    +  + L  V+L R   LL  +  S  
Sbjct: 289 ------RLLIYPVVLIFVMLFRPQGLLGTKELSFI 317


>gi|115525848|ref|YP_782759.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115519795|gb|ABJ07779.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 411

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 128/349 (36%), Gaps = 14/349 (4%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++       + LL     ++    +  T        +  +  IY +FA G +I+ G  G 
Sbjct: 1   MKHTSKLADIALLVGFAIVVALGPVIFTPIGAGYPDLLQKFAIYGIFAIGFNILFGLTGY 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           LS        +G+Y+ V       + +   +  S +++G   + +G  SL+  G Y +I 
Sbjct: 61  LSFGHAAFLGVGSYAAVWSFKLLSMDLLPAVAFSVILAGLLALAIGFISLRRSGIYFSIL 120

Query: 126 TLIMSEIFQNILIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           TL  +++  N+      PITNG+ G+ V          V   +          I     +
Sbjct: 121 TLAFAQMCYNMAYSVLTPITNGETGLRVLRNDPRHLDAVFGYVSPTPSLLGLPITGWTGF 180

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y+   +   +  + + + R+      R I+ NQ        +     LSAF +S  F G+
Sbjct: 181 YICGVVLVAAFGLSIAIFRSPFGMTLRAIKSNQNRMGYTGYSTRPYLLSAFVISGMFAGL 240

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA  AA+      +  +++ +  V+ + ILGG  +L      T ++     +    N  
Sbjct: 241 AGALLAATDPLAGAERMQWTASGEVVLMTILGGAGTLLGPVLGTGLIKYFENIFSAYNEQ 300

Query: 305 YFNSLLKF-------------DCSFNMRHTTLMVIALFLVILMRSHSLL 340
             N++  F                        + +    V++     ++
Sbjct: 301 QLNAVFSFVPDGAREWVVSTLSLFVGEGWQLTLGLLFMAVVIFLPGGIM 349


>gi|166030763|ref|ZP_02233592.1| hypothetical protein DORFOR_00437 [Dorea formicigenerans ATCC
           27755]
 gi|166029345|gb|EDR48102.1| hypothetical protein DORFOR_00437 [Dorea formicigenerans ATCC
           27755]
          Length = 358

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 78/337 (23%), Positives = 145/337 (43%), Gaps = 24/337 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  K + I  L+ +V   ++ + + +         + + I  Y++ A  L++VVG LG L
Sbjct: 10  KTTKNNMITYLMVIVVYAVIQVLVTSGSLSSLFTGLLVPICTYIILAISLNLVVGFLGEL 69

Query: 67  SLNCVIAYAIGAYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           SL       IGA++                    + + + A+ +G  G+++G+P L+  G
Sbjct: 70  SLGHAGFMCIGAFTSAFFSKCMKGVIEPDLLRFMIALLIGAVCAGIFGILIGIPVLRLNG 129

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           DYLAI TL   EI +N++  +    + K   +       L       I            
Sbjct: 130 DYLAIVTLAFGEIIKNVINVFYIGKDSKGFHFSMKDSVSLNMEPDGKILLNGPQGISGTP 189

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
           +   + +   +  ++  I+L L  +    A   IRD++ A  S+   I   KL AF++S+
Sbjct: 190 KDSTFTIGFILILITLVIVLNLISSRTGRAIMAIRDDRIAAESIGINITKYKLIAFSLSA 249

Query: 240 AFIGMAGAFFAASRDR--ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           A  GMAG  ++ +      +P  F ++ +I+++  V+LGG+ S+     A AIL  + EL
Sbjct: 250 AIAGMAGVLYSHNLSSLMATPQNFGYNMSIMILVFVVLGGIGSVRGSIIAAAILTLLPEL 309

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
             G++ Y                  +  I L +++L 
Sbjct: 310 LRGLSNY---------------RMLIYAIVLIVMMLF 331


>gi|254475842|ref|ZP_05089228.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria sp. R11]
 gi|214030085|gb|EEB70920.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria sp. R11]
          Length = 626

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 95/312 (30%), Gaps = 28/312 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLI 96
                   IY + A GL+I  G +G++++       +GAY+  ++          I + I
Sbjct: 337 LDAISLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQQFIPDHTLSIIVAI 396

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIA-TLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           P++  ++ A G+ M       R  Y     TL+ +      L +    T G     +   
Sbjct: 397 PMAFAVTFAMGVAMERLV--IRWLYSRPLETLLATFGISIALQQLAKNTFGTQARPLTAP 454

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                      +      +  V        + +         +  ++RT +    R +  
Sbjct: 455 ---------GWLDGAWVLNDVVSISYIRIAIFVLAMIFLGLFLYIMKRTRLGLEMRAVTQ 505

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N +   S+        +  F + S   G+AG          S         +     V++
Sbjct: 506 NPRMAGSMGINPGRVNMLTFGLGSGIAGIAGVAIGLFAKVTS--DLGSDYIVQSFMTVVV 563

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++        ++  + +    M      +   +   F +                R
Sbjct: 564 GGVGNIWGALAGAGMIGFLQKGIEWMTPSNTLAAQTYMIIFIIIFI-----------QFR 612

Query: 336 SHSLLRLRTPSN 347
              ++ L+  + 
Sbjct: 613 PRGIIALKGRAA 624


>gi|110669182|ref|YP_658993.1| ABC-type branched-chain amino acid transport system, permease
           protein II [Haloquadratum walsbyi DSM 16790]
 gi|109626929|emb|CAJ53399.1| ABC-type branched-chain amino acid transport system, permease
           protein II [Haloquadratum walsbyi DSM 16790]
          Length = 319

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 63/318 (19%), Positives = 126/318 (39%), Gaps = 30/318 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-------------YG 89
                IY + A G+++  G  GLL+      +AIGAY+  IL +              + 
Sbjct: 13  ANIAGIYSILAIGMNMHWGDTGLLNFAHAGFFAIGAYTSAILTTPASDSGLLANRIIGFD 72

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
             I + +  + +++G  G+++G  S++  GDYLAI TL  +EI +  +     +T+G+  
Sbjct: 73  FPIVVGMITATVLAGVAGVLIGATSVRLDGDYLAIVTLAGAEILRLGISNEGWLTSGQQT 132

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +    R                   S + Y  + + ++L +         +L ++     
Sbjct: 133 LKNIPRP------------LEGALPSMLPYGFYYFLLVLAVLIACYLTFRYLAKSPFGRV 180

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              IR+++    +L    +  KL +F + +A  G+AG+ +A     + P MF       V
Sbjct: 181 LHAIREDEDVPKALGRNTMQFKLKSFGLGAAVAGLAGSLWAHFIFALQPTMFTPDLTFSV 240

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            + VI+GG  S         ++  + ++   +      S +            ++   L 
Sbjct: 241 WAAVIIGGAGSYLGAITGMTVITLIRQVTRFI-----PSDVPLGSKLPYIRLIIIGALLV 295

Query: 330 LVILMRSHSLLRLRTPSN 347
           L++  R   LL  +  + 
Sbjct: 296 LILYYRPEGLLGNKERAL 313


>gi|256789735|ref|ZP_05528166.1| branched-chain amino acid ABC transport permease [Streptomyces
           lividans TK24]
 gi|289773624|ref|ZP_06533002.1| branched-chain amino acid ABC transport permease [Streptomyces
           lividans TK24]
 gi|289703823|gb|EFD71252.1| branched-chain amino acid ABC transport permease [Streptomyces
           lividans TK24]
          Length = 398

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 62/314 (19%), Positives = 118/314 (37%), Gaps = 7/314 (2%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 +   +G+  +   + A GL ++ G+ G LSL      A+GAY YV L    G  
Sbjct: 25  PFYLDAFWLRIGLFSMAAAIGAVGLGLLSGTAGQLSLGHAFFLAVGAYGYVWLAGEPGPG 84

Query: 92  IWLLIPVSAMISGACGMIMGL--PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +   +     +  A          + + +G YL +ATL +  +  ++L+    +T G  G
Sbjct: 85  LPPAVAAVLAVLLAGAAGGLFSPVAGRVKGIYLGVATLALVFLGHHVLLTADSVTGGFNG 144

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                 L   G T                 E  ++Y+ L +  ++      L R     A
Sbjct: 145 RS-VPPLELGGFTFAESDPGLTVLGVPFGAEERLWYLGLALFAVTWFTARGLLRGRPGRA 203

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              +RD++ A   +   +   + +AF VSS + G+AG   A S  R+ PD F  + ++  
Sbjct: 204 LAAVRDSETAAAVMGVHVARYRSAAFVVSSMYAGLAGVLLALSFRRVVPDYFSLALSVDY 263

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY----FNSLLKFDCSFNMRHTTLMV 325
           ++++++GG+ S++        +  +  L                             L  
Sbjct: 264 LAMIVIGGLGSVAGATAGAVFVTALPLLMTRYADQLPLVATPGSGGGSIGPTEASRYLYG 323

Query: 326 IALFLVILMRSHSL 339
            A+ +++L     L
Sbjct: 324 AAIVVILLYAPDGL 337


>gi|149191434|ref|ZP_01869684.1| branched-chain amino acid ABC transporter, permease protein [Vibrio
           shilonii AK1]
 gi|148834703|gb|EDL51690.1| branched-chain amino acid ABC transporter, permease protein [Vibrio
           shilonii AK1]
          Length = 541

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 99/306 (32%), Gaps = 21/306 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+   GL+I  G +G++++       IGAY+  ++       I L + +S  +
Sbjct: 256 LSLGSVLVLAGIGLAITFGVMGVINMAHGELIMIGAYTTYVMQQLMPNQIGLALILSIPM 315

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++G+   +    +L    L      + +L  +      +  +           +
Sbjct: 316 AFIVSGLVGIAIERSVIRHLYGRPL------ETLLATFGISLILQQAVRSIFSPLNRSVS 369

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +      +  +       Y++L    +   +++ L++T +    R +  N+    +
Sbjct: 370 TPDWMSGALQVNPMLSLTYNRLYIILFCIMVFIGLVMVLKKTPLGLQVRAVSQNRAMARA 429

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           F + S   G+AG   +   +         +  I    +V+ GG+ +L 
Sbjct: 430 MGIRSERVDALTFGLGSGVAGVAGVALSQLTNV--GPNMGQAYIIDSFMVVVFGGVGNLW 487

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L    ++                         L+++ + L I  R   L   
Sbjct: 488 GTLVAGLSLGLFNKILEPWAGAVLAK-------------ILVLVFIILFIQKRPRGLFPQ 534

Query: 343 RTPSNF 348
           R  +  
Sbjct: 535 RGRAAE 540


>gi|114762282|ref|ZP_01441740.1| high-affinity branched-chain amino acid transport system permease
           protein livh / high-affinity branched-chain amino acid
           [Pelagibaca bermudensis HTCC2601]
 gi|114544900|gb|EAU47904.1| high-affinity branched-chain amino acid transport system permease
           protein livh / high-affinity branched-chain amino acid
           [Roseovarius sp. HTCC2601]
          Length = 599

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 60/328 (18%), Positives = 127/328 (38%), Gaps = 26/328 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+AV   L   + +      +++  + I I ++   +   +IV G  G LSL   I Y
Sbjct: 20  LGLIAVAVLLAGLIAVPVAVGDEFVYHIFITICLFAALSTAWNIVGGYAGQLSLGHAIFY 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IG Y+  ++    G+S W  +   A ++    +++  P  +  G + A+AT+   E+F+
Sbjct: 80  GIGGYA-GVILVNLGISPWFGMFAGAAVAVVAAIVVSWPCFRLHGPFFALATIAFLEVFR 138

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + + ++ +T G  G+ +   + +     R                +    +  GM  + 
Sbjct: 139 VLALHFRELTGGATGLMIQLNIGWEWMVFRER--------------LPALLIAFGMLLVC 184

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++   +R   +       R+ + A  +     +  +L A ++S+A   M G F A    
Sbjct: 185 LAVAWAIRSHRLGFYLVATRERESAAKAAGVGTVKVRLMAVSISAALSAMVGTFHAMYLT 244

Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
            I P+ MF    +I +    ++GG+ ++        +L+ + E   G        L  F 
Sbjct: 245 FIEPESMFSLQFSIQIAMFALIGGIGTVWGPLLGAVLLVPITEFARGALGSEAIGLHGFV 304

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
               +    L +           + ++ 
Sbjct: 305 YGVVLMLVVLFL----------PNGIMG 322


>gi|118580095|ref|YP_901345.1| inner-membrane translocator [Pelobacter propionicus DSM 2379]
 gi|118502805|gb|ABK99287.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Pelobacter propionicus DSM 2379]
          Length = 319

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 70/304 (23%), Positives = 135/304 (44%), Gaps = 29/304 (9%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y+ ++ + + I  M A  L++++G  G +SL     + +GAY   IL + YG++ WL++P
Sbjct: 26  YLLNVLLFVGINTMLAVALNLLLGYAGQISLGHAGFFGLGAYLSGILTATYGMNPWLVMP 85

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           ++A++ G     +G P LK +G  LA+ATL +  I   +  +    T G +G      L 
Sbjct: 86  LAALVVGILAWAIGFPVLKLKGHNLAMATLGLGIIIYIVFNETVDYTGGPSGFSGIPSLS 145

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
             G    S ++               YY++     L     + L  + I  A R + D++
Sbjct: 146 LGGIVFDSDLK--------------SYYLIWCFALLVILFSVNLANSRIGRALRAVHDSE 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A   +    +  K+  F +S+    +AG+ +A +   +SP  F F+ +I ++++V++GG
Sbjct: 192 VAARVMGVNALLLKVQVFTLSAVICSLAGSLYAHTVTFVSPASFGFNFSIELLTMVVIGG 251

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+       A+L  + E     + Y                  +    L L+++    
Sbjct: 252 LGSIYGSFLGAALLTLLPEFLRAAHDY---------------DIIIYGALLMLMVMFMPG 296

Query: 338 SLLR 341
            L+R
Sbjct: 297 GLVR 300


>gi|296188266|ref|ZP_06856658.1| amino acid or sugar ABC transport system, permease protein
           [Clostridium carboxidivorans P7]
 gi|296047392|gb|EFG86834.1| amino acid or sugar ABC transport system, permease protein
           [Clostridium carboxidivorans P7]
          Length = 300

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 79/309 (25%), Positives = 140/309 (45%), Gaps = 31/309 (10%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y  ++ +   IYV+   GL++  G  G +SL     YAIGAY+  IL  ++G SIW
Sbjct: 3   IFNSYFINILVVAGIYVILTLGLNLTTGFAGQVSLGHAAFYAIGAYTAAILSVKFGCSIW 62

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + +P+SA+++   G I+GLPSL+ + D+LA+ T+ +  I Q++++    IT G  GI   
Sbjct: 63  ITLPISALVTWIIGAILGLPSLRVKEDFLAVVTMGLGLIIQSLMLNL-KITGGPMGIGNI 121

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             +  LG                       + + L +  +    +  +  +    A   I
Sbjct: 122 KPVSILGHNFSMFN---------------FFILELVIIVILTFTMNRMVNSRFGRALIAI 166

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R+++    +L       K+ AFA+ + + G+AG  FA     +SPD F F+E+ I++S+V
Sbjct: 167 REDETVADTLGINTTKYKVLAFAIGAMYAGIAGTLFAHYFTYVSPDSFGFTESSIILSMV 226

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ++GG+ S+        IL    EL  G+  Y                  +  + + +++ 
Sbjct: 227 VIGGLGSIKGSIIGAVILSIAPELLRGLKDY---------------RILIYGLLMVIMMR 271

Query: 334 MRSHSLLRL 342
            R   L   
Sbjct: 272 YRPQGLFGE 280


>gi|269928796|ref|YP_003321117.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
 gi|269788153|gb|ACZ40295.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
          Length = 365

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 68/307 (22%), Positives = 135/307 (43%), Gaps = 16/307 (5%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            ++ I +L+Y   A   +I+ G  G +SL     + IGAY+  +L SR+ ++ WL +   
Sbjct: 39  LNIAILVLVYAALAQAWNILGGFAGQISLGNAAFFGIGAYTSTVLLSRWEVTPWLGMLAG 98

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           A+++    +I+G P  +  G Y AIAT+ ++EI   +   W+ +      +    R    
Sbjct: 99  ALVAAIFAVIIGYPVFRLGGHYFAIATIALAEIVLTVFNDWEWVGGATGMLIPFAR---- 154

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                       +   F + +   +Y+ L +  L   + + + R+ +    R I+++Q A
Sbjct: 155 -DIETGRPTNSLYYLQFNLGKAPYFYIALALVVLVTVVTVIIDRSKLGYYLRAIKNDQDA 213

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK-FSENIIVISIVILGGM 278
             +L   ++  KL A A+S+AF  + G F+A     I P+       ++++  + ILGG+
Sbjct: 214 ARALGVHVLRYKLIAIAISAAFSAVVGTFYAQYLLYIDPETTMRLELSVLIALVAILGGV 273

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +++      A+LI   EL             +   S N     +    + L+ + + + 
Sbjct: 274 GTVAGPLVGAAVLIPAAELTRQ----------QLGGSGNAIDLIMYGALIVLISIFQPNG 323

Query: 339 LLRLRTP 345
           L+ L   
Sbjct: 324 LMGLVRR 330


>gi|21219233|ref|NP_625012.1| branched-chain amino acid ABC transport permease [Streptomyces
           coelicolor A3(2)]
 gi|6752323|emb|CAB69679.1| putative branched-chain amino acid ABC transport permease
           [Streptomyces coelicolor A3(2)]
          Length = 398

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 64/314 (20%), Positives = 124/314 (39%), Gaps = 7/314 (2%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL- 90
                 +   +G+  +   + A GL ++ G+ G LSL      A+GAY YV L    G  
Sbjct: 25  PFYLDAFWLRIGLFSMAAAIGAVGLGLLSGTAGQLSLGHAFFLAVGAYGYVWLAGEPGPG 84

Query: 91  -SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
               +   ++ +++GA G +    + + +G YL +ATL +  +  ++L+    +T G  G
Sbjct: 85  LPPAVATVLAVLLAGAAGGLFSPVAGRVKGIYLGVATLALVFLGHHVLLTADSVTGGFNG 144

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                 L   G T                 E  ++Y+ L +  ++      L R     A
Sbjct: 145 RS-VPPLELGGFTFAESDPGLTVLGVPFGAEERLWYLGLALFAVTWFTARGLLRGRPGRA 203

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              +RD++ A   +   +   + +AF VSS + G+AG   A S  R+ PD F  + ++  
Sbjct: 204 LAAVRDSETAAAVMGVHVARYRSAAFVVSSMYAGLAGVLLALSFRRVVPDYFSLALSVDY 263

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY----FNSLLKFDCSFNMRHTTLMV 325
           ++++++GG+ S++        +  +  L                             L  
Sbjct: 264 LAMIVIGGLGSVAGATAGAVFVTALPLLMTRYADQLPLVATPGSGGGSIGPTEASRYLYG 323

Query: 326 IALFLVILMRSHSL 339
            A+ +++L     L
Sbjct: 324 AAIVVILLYAPDGL 337


>gi|46579127|ref|YP_009935.1| branched-chain amino acid ABC transporter permease [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120603295|ref|YP_967695.1| inner-membrane translocator [Desulfovibrio vulgaris DP4]
 gi|46448540|gb|AAS95194.1| branched-chain amino acid ABC transporter, permease protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563524|gb|ABM29268.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311232968|gb|ADP85822.1| inner-membrane translocator [Desulfovibrio vulgaris RCH1]
          Length = 317

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 76/321 (23%), Positives = 140/321 (43%), Gaps = 31/321 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L + + +       Y   + + I +Y + A  L++++G  GL  +     YA+GAY+ 
Sbjct: 9   AGLAVLIAVLPLFLDPYWTDVCVSIGLYAVLALSLNLILGQAGLFHMGHAAFYAVGAYTA 68

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN-ILIKW 140
            IL + Y + +   +PV+ +++    +++  P +  RGDYL I T+ + EI +  ++   
Sbjct: 69  AILNTVYHVPVLWTMPVAGLLAALFALVVARPIIHLRGDYLLIVTIGIVEIVRIALINNV 128

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             IT G  GI+   R    G  +                 I  YY++     +S  +   
Sbjct: 129 FGITGGANGIFGISRPMLFGYKISK--------------PIQFYYLIWTWVAISILLFRR 174

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  +    A   I+++  A         + KL+AF + + + GM G F+AA    ISP+ 
Sbjct: 175 LECSRFGRALNYIKEDDVAAEGSGVDTAYYKLAAFVLGALWAGMTGTFYAAKMTIISPES 234

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F F E++++ +IVILGG  S   +     +LIG+ EL                  F    
Sbjct: 235 FSFWESVVLFAIVILGG-GSNRGVLLGAFLLIGLPELFR---------------DFASAR 278

Query: 321 TTLMVIALFLVILMRSHSLLR 341
             +  +A+ ++++ R   +L 
Sbjct: 279 MLIFGLAMVVMMIFRPQGMLP 299


>gi|289577846|ref|YP_003476473.1| inner-membrane translocator [Thermoanaerobacter italicus Ab9]
 gi|289527559|gb|ADD01911.1| inner-membrane translocator [Thermoanaerobacter italicus Ab9]
          Length = 322

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 71/316 (22%), Positives = 129/316 (40%), Gaps = 41/316 (12%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               ++    I I I ++ A  L++VVG  G  S+      A+GAY+  I+   + +   
Sbjct: 32  IISPFVMLNLITIAINIILAVSLNLVVGFTGQFSIGHAGFMALGAYASAIMSLNFNVPFI 91

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + + V A+++G  G+I+G+P+L+ RGDYLAIATL ++EI + ++     +  G  G+   
Sbjct: 92  VSLLVGAIVAGIGGIIIGIPTLRLRGDYLAIATLGLAEIIRGVITNIDYL-GGAYGLMGI 150

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            +                            +    G   ++  +I    +++   A  ++
Sbjct: 151 PQKTN-------------------------WLWAFGCMLVTVLVIKNFVQSSHGRACVSV 185

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R+N+ A  ++       K+ AF + S F G+ GA  A     I P+ F F ++  ++ +V
Sbjct: 186 RENEIASEAMGINTTKYKVIAFTMGSFFAGIGGALLAHYITFIEPNAFNFLKSFDILVMV 245

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG  SL+    A  +L  +      +                             V+L
Sbjct: 246 VLGGQGSLTGSVVAAIVLTLISTFLQSLAELRLIIYAIILIL---------------VML 290

Query: 334 MRSHSLLRLRTPSNFL 349
            R   LL     S  L
Sbjct: 291 FRPQGLLGTHELSFKL 306


>gi|320450125|ref|YP_004202221.1| branched-chain amino acid transport system permease
           LivM/branched-chain amino acid transport ATP-binding
           protein livG [Thermus scotoductus SA-01]
 gi|320150294|gb|ADW21672.1| branched-chain amino acid transport system permease protein
           LivM/branched-chain amino acid transport ATP-binding
           protein livG [Thermus scotoductus SA-01]
          Length = 584

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/309 (17%), Positives = 115/309 (37%), Gaps = 21/309 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  ++     +  M A  L ++ G  G+ S        +GAY+  +L  + GLS WL +
Sbjct: 19  PYYLTLLNFFALSAMVALSLYVLTGLAGMTSFAQAAFMGMGAYATALLTVKAGLSPWLGL 78

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               + +    +++G  +++ +G +L ++T+        +      +T G  G+     +
Sbjct: 79  GAGLLSALLLALLLGALTVRLKGHFLPLSTIAWQVALYILAGNLVGLTGGHTGLTDLPPI 138

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           +  G ++ +  R+       ++  +   Y               LR++ I  A   +R +
Sbjct: 139 HLFGISLDTGFRYAFLTLFLLVLLVLALY--------------NLRQSRIGRALLALRGD 184

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             A  S        +L AF +S    G+AG  +A     ++P  F    +I  + + + G
Sbjct: 185 ALAAASFGVDPAALRLKAFLLSGVIAGLAGFLYAHFLRFVNPTPFSLEASIKYLVMAVAG 244

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+  +    A   G+ +    +                   T    + L L++++  
Sbjct: 245 GVGSIPGVMLGAAFFTGLEDWLKDLLPLLLG-------QQGNYETIGYGLILALILILAP 297

Query: 337 HSLLRLRTP 345
             L  +   
Sbjct: 298 KGLWPMVER 306


>gi|55379129|ref|YP_136979.1| branched-chain amino acid ABC transporter permease [Haloarcula
           marismortui ATCC 43049]
 gi|55231854|gb|AAV47273.1| branched-chain amino acid ABC transporter permease protein
           [Haloarcula marismortui ATCC 43049]
          Length = 369

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 55/324 (16%), Positives = 122/324 (37%), Gaps = 19/324 (5%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
              +  Y+  +     +Y++ + GL++  G  G+++ +    + +GAY   +L +     
Sbjct: 34  GFLAPAYLLYLIGLSAMYMLLSMGLNVQWGYGGMINFSVAAFFGLGAYGTALLTASGSPI 93

Query: 92  -----IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
                  + +     ++    +I+G P+LK R DYLAIA+L ++E+ +  ++     T G
Sbjct: 94  SGGVSPVIALFGGLGLAAVLAVIIGYPTLKLRDDYLAIASLGLAEVVRIFILNESQWTAG 153

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSF---------VIYEIFMYYVLLGMCFLSASI 197
            AG+      +     +  L   + F             V+  +    ++  +       
Sbjct: 154 SAGLTGIPLFFSDWPVLGDLTYPYVFNVGGTPVFNMSQSVVTSLLNVVLVTVIVAAVYLF 213

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  + ++      RTIR ++    +L       K+ AF + S  + +AG F++     +S
Sbjct: 214 LRRIHQSPWGRVLRTIRTDEDLAETLGKNTFAFKMQAFVIGSLIMALAGVFYSHLVLFVS 273

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P   +      V   VILGG  S          ++ + +    +                
Sbjct: 274 PQDLQPITTFYVWVAVILGGTGSDRGAMLGGFTIVAIQQGTRFLT-----DTGALPIGAA 328

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                L+ + +  ++ +R   +L 
Sbjct: 329 PLRLMLVGLLIIFIVRLRPEGILP 352


>gi|329904369|ref|ZP_08273775.1| inner-membrane translocator [Oxalobacteraceae bacterium IMCC9480]
 gi|327548015|gb|EGF32753.1| inner-membrane translocator [Oxalobacteraceae bacterium IMCC9480]
          Length = 349

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 72/338 (21%), Positives = 134/338 (39%), Gaps = 25/338 (7%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
              L +    +    ++  L++ +F+          ++ I IL+        +IV G  G
Sbjct: 14  PQSLPRKTAGIGYALMLALLVIAVFVPQFVDSPSHQNIAILILMAAQMGVAWNIVGGYAG 73

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            +SL     Y IGAY+  +L +++GL+ WL +    +++    +++G    + +  Y A+
Sbjct: 74  QVSLGQAAFYGIGAYTSTLLFAQFGLNPWLAMIAGGVVAALISIVIGWSCFRLKSPYFAM 133

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           AT+ ++EI Q I   W+            DR                +       ++  Y
Sbjct: 134 ATIAVAEIIQIIFTNWEFAGGAVGLTIPMDR--------------QGWDVFVFASKVPYY 179

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y+ LG+  L+    L + R+     +R I+D   A  SL   +   KL AFAVSS F  +
Sbjct: 180 YIALGLLVLTLLANLMIERSYFGYYFRAIKDEPDAARSLGVNLRKYKLIAFAVSSFFTAL 239

Query: 245 AGAFFAASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
            G+F+A     I P        +I +  + ILGG+ +L        IL  + E    +  
Sbjct: 240 GGSFYAQKELYIDPASVLGTGLSIKMALVSILGGIGTLFGPVLGAGILTLIDEGTRAL-- 297

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   F  +       +    + +V +   + ++ 
Sbjct: 298 --------FGGTGRGTDLIIYAALIIVVAVYYPNGVIG 327


>gi|170690612|ref|ZP_02881779.1| ABC transporter related [Burkholderia graminis C4D1M]
 gi|170145047|gb|EDT13208.1| ABC transporter related [Burkholderia graminis C4D1M]
          Length = 619

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 106/334 (31%), Gaps = 29/334 (8%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +   +  L  +    +L +  G      Y+ ++ IQ   + + A  + I+ G  G L+ 
Sbjct: 24  TQQKSLRGLAMIGVLGILLIAAGPFLFGSYLLNVLIQAFFFSIVAVTVDILWGYTGYLTF 83

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                + +GAY+  ++ +  G S   ++   A        +  L          +     
Sbjct: 84  GQSAFFGLGAYAAGLVFTHGGFSTAYVLLALAATLAVTAGVAALLGWLSFYRGASPFFAT 143

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +  +   I++    ++ G+                           +F +     Y++  
Sbjct: 144 VMSLVLPIVLSQLLLSGGE---------------WTGSSSGLTGYQTFDLSLEAWYWIAG 188

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
               +   +     R+        IRDN+     L       K+     ++A  G+AG  
Sbjct: 189 AALAVVVGLAWVFVRSDGGRVLAAIRDNESRCLYLGINTSLVKIGLLVATAAVAGLAGFG 248

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           + +    ++P++  F     +I  V LGG  +L        ++        G+  +    
Sbjct: 249 YGSFSGVVAPELTGFVLGTQLIIWVALGGRGTLWGPVIGALLINVGTSYLSGIMPF---- 304

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         ++  A   VI++    L+ L
Sbjct: 305 ----------AWQLILGAAFVAVIVLLPQGLVPL 328


>gi|83591316|ref|YP_431325.1| inner-membrane translocator [Moorella thermoacetica ATCC 39073]
 gi|83574230|gb|ABC20782.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Moorella thermoacetica ATCC 39073]
          Length = 317

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 75/342 (21%), Positives = 139/342 (40%), Gaps = 41/342 (11%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R NK + I+    ++   L++    A     + +   + + I ++ A  L+++VG  G 
Sbjct: 1   MRFNKKNLIVLAGVILIYFLVYELQAAGVISAFQEINLMMLGINIILAVSLNLIVGFTGQ 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           L+L      A+GAY   IL + +     + +   A  +   G+++GLP+L+ RGDYLAIA
Sbjct: 61  LALGHAGFMAVGAYVSAILSTNFNQPFPVALLAGACAAAVAGIVIGLPTLRLRGDYLAIA 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL   EI +        I  G AG+    +L                             
Sbjct: 121 TLGFGEIIRGAANNINYI-GGAAGMIGIPQLTNWT------------------------- 154

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            L  M  L+  +      +    A   IR+N+ A  ++     + K+ AFA+ + F G+A
Sbjct: 155 WLYAMMVLTILVTTNFINSTHGRACVAIRENEIAAETMGINTTYYKVLAFAMGAFFAGIA 214

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA +A     I P  F F  +  ++ +V+ GG+ S++    A A +  V      +    
Sbjct: 215 GALYAHYFYLIQPTTFTFFRSFDILVMVVFGGLGSITGSIIAAAGITFVNAALQDL---- 270

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                       +    +  + L ++++ R   L+  +  + 
Sbjct: 271 -----------AVLRMVIYAVLLIIIMVFRPQGLMGNKEFTL 301


>gi|156937523|ref|YP_001435319.1| inner-membrane translocator [Ignicoccus hospitalis KIN4/I]
 gi|156566507|gb|ABU81912.1| inner-membrane translocator [Ignicoccus hospitalis KIN4/I]
          Length = 342

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 66/314 (21%), Positives = 133/314 (42%), Gaps = 20/314 (6%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
            + S  Y   +   I  Y + A  L++  G  GL +   V   A+GAY+  +L S + L 
Sbjct: 20  FSVSPSYAIDVIFFIAFYAIAALSLNLEYGYTGLNNFGQVAFIAVGAYTAGVLSSAFHLP 79

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAG 149
               +  +A+  G  G  + +P++K R DYL +AT+I+ E+ + +L     + +  G  G
Sbjct: 80  FVYCLLAAALAGGLLGAFVAVPTVKLREDYLGMATIIIGEMIRILLRNTPTESVWGGVFG 139

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +   + ++                   +  +     + L +  L+  ++     + +   
Sbjct: 140 LRGINPVFAYIK-------------DPLARQGAFVLLTLSLLALTYWLVDKWGNSPLGRV 186

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            ++IRD++ A  S+       KL    V SA  G+AGA +A     ++PD+F      ++
Sbjct: 187 LKSIRDDELASKSVGKFTYRYKLITMFVGSALAGVAGALYAFYFLYLNPDVFMPLITFMI 246

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             +VI+GG+ +   +   +AI+I +  L      Y     +      N     ++ I + 
Sbjct: 247 WIMVIMGGVANNYGVVVGSAIVILINRLTQIAKDY-----INLPIEPNYFQAMMVGILII 301

Query: 330 LVILMRSHSLLRLR 343
           + ++ R   L+  +
Sbjct: 302 VFLMFRPQGLVVEK 315


>gi|111021742|ref|YP_704714.1| ABC sugar transporter, ATP-binding component [Rhodococcus jostii
           RHA1]
 gi|110821272|gb|ABG96556.1| ABC sugar transporter, ATP-binding component [Rhodococcus jostii
           RHA1]
          Length = 854

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 66/332 (19%), Positives = 119/332 (35%), Gaps = 30/332 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y     L      +L  + L A     Y         +Y +    +S++ G  G+ S+  
Sbjct: 19  YSAAQLLGGPAAAILTIMVLSAGLVPGYQIYTVGLAAVYGLIVLSISLLAGWTGIWSIGH 78

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A+GAY      S      +  +  +  +    G  +G    +F   Y+A+ TL  +
Sbjct: 79  PAMVAVGAYVTAYGSSSGWGLAFTSVV-AVALCAMLGGFLGFAGSRFSVLYVALLTLAFT 137

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +   I+  WK +T G  G+ V      LG  V S                 + Y+ +G+
Sbjct: 138 LVTLEIIGAWKSVTGGDQGVPVDAFDTTLGELVPSSD--------------AVTYLAVGV 183

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L+ ++ ++LRRT I       + +  A  S+           FA+S+   G++G   A
Sbjct: 184 LGLAVAVSVFLRRTTIRMRMVAAKTHPLAGRSIGIAPELQSSLGFAISAGVAGLSGVLLA 243

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                ISP+ F     + +I+  +LGG  S+       A L     L   +         
Sbjct: 244 LLSGFISPEGFSMVFAVNLIAATVLGGTGSVIGAVLGGAFLASAPTLASSL--------- 294

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 ++    L+   L L +L  +  ++  
Sbjct: 295 ------SIDQPYLIGGVLILTLLFLADGIVPT 320


>gi|332142257|ref|YP_004427995.1| Branched-chain amino acid ABC-type transport system, permease
           component [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552279|gb|AEA98997.1| Branched-chain amino acid ABC-type transport system, permease
           component [Alteromonas macleodii str. 'Deep ecotype']
          Length = 556

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/296 (12%), Positives = 100/296 (33%), Gaps = 21/296 (7%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++   +   I   + ++   +      +G
Sbjct: 281 AAIGLAITFGVMGVINMAHGEMIMLGAYTTYVIQITFPSLIEYSLLMAIPAAFLVSGFVG 340

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           +   +    +L    L      + +L  +      +  +                +    
Sbjct: 341 VLIERGVIRFLKGRPL------ETLLATFGVSLILQQLVRTVFSPLNRQVQAPEWMTGSW 394

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
             +          Y+++    +  +++L L+++++    R +  N+    +L+    +  
Sbjct: 395 VINPVFSLTYNRLYIIIFSLVVFFTLMLILKKSSLGLHVRAVSQNRDMARALSIKSDWVD 454

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
            + F + S   G+AG   +   +         +  I    +V+ GG+ +L     A   L
Sbjct: 455 AATFGLGSGIAGVAGVVLSQLTNV--GPNLGQAYIIDSFLVVVFGGVGNLWGTLVAAMSL 512

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
             + +    +      +              ++++ L L I  R   L   +  S 
Sbjct: 513 GTINKFLEPITGSVLAN-------------IIVLVGLVLFIQKRPKGLFPQKGRSA 555


>gi|298294033|ref|YP_003695972.1| ABC transporter [Starkeya novella DSM 506]
 gi|296930544|gb|ADH91353.1| ABC transporter related protein [Starkeya novella DSM 506]
          Length = 584

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 69/337 (20%), Positives = 131/337 (38%), Gaps = 29/337 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
            R         L  ++    +        +Q Y  ++ +Q   Y +   G+ IV+G  G 
Sbjct: 2   TRTASSTGRTALYGILALAAVVAVALFAPTQGYYLNIMMQAATYAIAVAGVVIVLGYCGQ 61

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           L+L       +GAY   +    YGL  ++ + +  +++   G+ +GL +L+  G YLA+ 
Sbjct: 62  LALCQAAFLGLGAYCVALGTVDYGLPFFVALALGVVVTSIGGIFLGLATLRLGGHYLAMV 121

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           T+    I   +L  W   T G  GI   +R       +                      
Sbjct: 122 TIGFQMIVTMVLTNWISFTRGPDGISGVERPVLGPIDLSG--------------GSSYLA 167

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + L            L+ + +  A + +RDN+ A  +    +   K  AF +S+A  G+ 
Sbjct: 168 LCLAFLVGVTFYAAGLKASRLGRAMQAVRDNEIAASTCGINVFRTKTVAFGISAALGGLG 227

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  FA +   ISPD F F+E+I+++++ +LGG+ S       T +L+ + E    +    
Sbjct: 228 GGLFAGAFSYISPDQFTFNESIVLLTMALLGGVQSPVGALLGTILLVLLPEWLRFLR--- 284

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         +  +   A+  +++     +  L
Sbjct: 285 ------------QAYLAVYGAAVIAIMIFLPRGVWGL 309


>gi|169831290|ref|YP_001717272.1| inner-membrane translocator [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638134|gb|ACA59640.1| inner-membrane translocator [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 299

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 69/308 (22%), Positives = 122/308 (39%), Gaps = 41/308 (13%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y   +   + I+++ A GL ++ G  G LS       +IGAY+  +L  R  L   
Sbjct: 8   FINPYYVQVLTLLGIFLIAALGLHLITGVTGQLSFGHAAFLSIGAYTAALLNLRLDLPFL 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             +   A  +   G+++G PS++  GDYL IATL  +EI + + +  + IT G  G+   
Sbjct: 68  ACLLAGACAAALAGVLVGFPSMRLTGDYLGIATLGFAEIVRVVFMNLE-ITGGARGLAGI 126

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            R                               +  +  L+   +  L  +    A   I
Sbjct: 127 PRETN-------------------------LVTVYVLVILTIWAMYRLNNSRFGRALVAI 161

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R+++ A   +    ++ K+ AFA+ S   G+AG  +A     ++P  F F+ +  ++  V
Sbjct: 162 REDEIAAECMGIKSLWYKVGAFAIGSFCAGLAGGLYAHLLQYLNPSDFGFARSFEILCFV 221

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ S+      T IL    E+      Y                  +  I + L+++
Sbjct: 222 VLGGLGSIPGAVLGTTILTIAPEMLRFSAEY---------------RMMMYGILMVLMMI 266

Query: 334 MRSHSLLR 341
            R   LL 
Sbjct: 267 FRPSGLLG 274


>gi|220920345|ref|YP_002495646.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219944951|gb|ACL55343.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 357

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 71/325 (21%), Positives = 134/325 (41%), Gaps = 19/325 (5%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            V+  L  L L      +Y  S+ IQI  + + A GL+I+VG  G +S+     +  GA+
Sbjct: 31  AVWAGLALLCLAPLILDRYWLSLLIQIGYFAVAALGLNILVGFTGQISIGHAAFFGFGAF 90

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +   L +   + ++  IP+S +++ A G++ GLP+ + +G YLAIATL    I Q+   +
Sbjct: 91  ASAWLSNNLAIPVFFAIPLSGIVTTAVGLVFGLPAARLKGLYLAIATLAAQYILQDFFAR 150

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
               T G AG                                  +YV+L    L+  +  
Sbjct: 151 ANWFTGGVAGTPAEAFSILGFAFDTDQRY---------------FYVVLAYLVLTFVLAS 195

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  +    A   +RD+  +   +   +   +  +F +S+ F G+ GA +A     +S +
Sbjct: 196 NLMHSRDGRALVAVRDHYLSAEMMGINLTRYRTLSFGLSAFFAGVGGALYAHYLQFVSVE 255

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY----FNSLLKFDCS 315
            F    +I  + ++I+GG+ S+      TA ++ V E    +         +  L    +
Sbjct: 256 GFGILLSIQFLGMIIIGGLGSIMGTLMGTAFMVLVPEAMGWITDAVRGSALDRALALKDN 315

Query: 316 FNMRHTTLMVIALFLVILMRSHSLL 340
            +      + + + L ++     L 
Sbjct: 316 LSFLREMAIGLVIVLFLIFEPDGLA 340


>gi|307943925|ref|ZP_07659267.1| branched-chain amino acid ABC transporter, permease protein
           [Roseibium sp. TrichSKD4]
 gi|307772766|gb|EFO31985.1| branched-chain amino acid ABC transporter, permease protein
           [Roseibium sp. TrichSKD4]
          Length = 649

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 97/312 (31%), Gaps = 28/312 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---RYGLSIWLLI 96
                   IY + A GL+I  G +G++++       IGAY+  ++      Y  SI + +
Sbjct: 360 LDGLSLASIYFLAAIGLAITFGVMGVINMAHGEFIMIGAYTGYVVQQVIPDYTTSIIVAL 419

Query: 97  PVSAMISGACGMIMGL-PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           P++ +++ A G+ +        R   L    L+ +      L +      G     +   
Sbjct: 420 PLAFILAFAAGVALERSVIRHLRHRPLET--LLATFGVSIALQQLAKNIFGTQARPLTAP 477

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                      +      +  +   +    +          +I  L +T      R +  
Sbjct: 478 A---------WLDGSWIINDIISISMIRIAIFALALAFLGLLIFILTKTRFGLEVRAVTQ 528

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N +   S+        +  F + S   G+AG          S      +  +     V++
Sbjct: 529 NPRMASSMGINPERINMLTFGLGSGIAGIAGVAIGLFAKVTSE--LGSAYIVQSFMTVVV 586

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++        ++  + +    +N     +   +   F +                R
Sbjct: 587 GGVGNIWGTLAGAGMIGSLQKFIEWLNPSNTLAAQTYMIIFIIIFI-----------QFR 635

Query: 336 SHSLLRLRTPSN 347
              ++ L+  + 
Sbjct: 636 PKGIIALKGRAA 647


>gi|325264688|ref|ZP_08131417.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium sp. D5]
 gi|324029980|gb|EGB91266.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium sp. D5]
          Length = 357

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 75/334 (22%), Positives = 146/334 (43%), Gaps = 23/334 (6%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            K + I   + ++  +++ +F+ +      +  + + +  YV+ A  L++ VG LG LSL
Sbjct: 9   TKNNLITYGMVIIAYIIVQIFVLSGSLSNLMQGLLVPLCTYVILALSLNLTVGVLGELSL 68

Query: 69  NCVIAYAIGAYSYVILGSRYGL------SIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
                  IGA++                  +L I + A+++   G+++G+P L+ RGDYL
Sbjct: 69  GHAGFMCIGAFTGAFFSKCTFGAIPDGLRFFLAILLGALVAAIFGILIGIPVLRLRGDYL 128

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           AI TL   EI +N++       +     +       L       +            +  
Sbjct: 129 AIVTLAFGEIIKNVMNVLYVGKDSAGFHFSLKDQMSLNLADGGEVIIKGAQGISGTPKNS 188

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            + + + +  ++  IIL L  +    A   IRDN+ A  S+   I   KL AFAVS++  
Sbjct: 189 TFTIGIILVLITLFIILNLMNSRDGRAVMAIRDNRIAAESIGINITKYKLMAFAVSASLA 248

Query: 243 GMAGAFFAASRDRIS--PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G+AG  +A +   ++  P  F ++ +I+++  V+LGG+ ++     A  +L  + E+  G
Sbjct: 249 GVAGVLYAHNLATLTALPKNFGYNMSIMILVFVVLGGIGNMRGSIIAAVLLTLLPEVLRG 308

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +N Y                  +  + L +++L 
Sbjct: 309 LNDY---------------RMLIYAVVLIVMMLF 327


>gi|253700889|ref|YP_003022078.1| inner-membrane translocator [Geobacter sp. M21]
 gi|251775739|gb|ACT18320.1| inner-membrane translocator [Geobacter sp. M21]
          Length = 297

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 66/315 (20%), Positives = 130/315 (41%), Gaps = 38/315 (12%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           FL         Y+  + + + I ++ A GL+++VG  G LSL      +IGA++  ++  
Sbjct: 4   FLNSLVGTVDPYMMQILVNVGIAIVLALGLNVIVGLTGQLSLGHAAFMSIGAFTSAMVTI 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
           + GL   L + V+  ++      +G P L+  GDYLAI TL  +EI +   + ++     
Sbjct: 64  KTGLPFSLNLLVTGAVTAIVAAAIGFPILRLTGDYLAICTLGFAEIVKVFFLNFE----- 118

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                                +            I M   +  +  LS  ++ +++ +  
Sbjct: 119 ------------------PTNKALGLTVPQAKTVIPMPIYVWVVVILSIVLVTFVQSSRF 160

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A + IR++  A  ++       K+ AFA+ S   G+ G  +A     I+P  F F ++
Sbjct: 161 GRALKAIREDDIAAEAMGINTARYKIQAFALGSFMAGVGGGLYAHFLSYINPSDFGFLKS 220

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           + ++++V+LGG+ S+      +++L    E    M+ Y                  +   
Sbjct: 221 VDILAMVVLGGLGSVPGTVIGSSVLASAPEFLRFMSQY---------------RMLVYGA 265

Query: 327 ALFLVILMRSHSLLR 341
            L  +++ R + LL 
Sbjct: 266 LLVFLMVFRPNGLLG 280


>gi|227499403|ref|ZP_03929514.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Anaerococcus tetradius
           ATCC 35098]
 gi|227218465|gb|EEI83708.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Anaerococcus tetradius
           ATCC 35098]
          Length = 325

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 84/340 (24%), Positives = 150/340 (44%), Gaps = 45/340 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             I  LL +   ++L + + +    +Y +S+ I I I ++ A  L++ VG LG ++L   
Sbjct: 9   YIITTLLVLALFIILEVLMNSGLISRYWESILILICINIIMATSLNLTVGVLGQVNLGHA 68

Query: 72  IAYAIGAYSYVILG----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
              AIGAY+  I      +   L   + + ++A++SG  G+++GLP L+ RGDYLAI TL
Sbjct: 69  GFMAIGAYTAGIFLKTGLASGPLGFVISLVLAALVSGFFGILIGLPILRLRGDYLAIVTL 128

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              EI + I+     IT G  G+                              I  + + 
Sbjct: 129 AFGEIIRVIIENM-NITGGAQGMAGIP-------------------------TIKSFAIF 162

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  L  ++I     +    A  +IRDN+ A  +    I   K  AF +S+ F G+AGA
Sbjct: 163 FFVAVLIIALIFTYADSRHGRAVLSIRDNELAAEACGINITKYKTFAFTLSAVFAGIAGA 222

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A S   I+ ++F ++++   + +V+LGG+ S++    ++  L  + E+   +      
Sbjct: 223 LYAQSFGVIAANIFNYNKSFDYLVMVVLGGIGSITGAIISSVGLTILPEILRPLAE---- 278

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  + L LV++ R   LL  +  S 
Sbjct: 279 -----------WRMVIYAVILILVMIFRPQGLLGRKEFSI 307


>gi|226306811|ref|YP_002766771.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226185928|dbj|BAH34032.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 332

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 62/315 (19%), Positives = 124/315 (39%), Gaps = 6/315 (1%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +   +G   + Y + A GL++  G  GLL+   +    +G Y   I+   Y   +WL I
Sbjct: 13  SFAQLIGPSAIFYALLAIGLNLHFGYAGLLNFGQIGFALLGGYGVGIMTVTYDQPLWLGI 72

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIYVAD 154
            V    +G   +++G+P+L+ R DYLAI T+  SEI + I        +T    G++   
Sbjct: 73  LVGLTAAGLLALVLGIPTLRLRADYLAIVTIAASEILRLIFRSTASDSVTGSTNGLFGFA 132

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
             +   +   S  ++      F   +++   V   +  +    +  L  +      + +R
Sbjct: 133 DPFTALSPFDSAKQYSFLGVKFYGDDLWSMVVGWTLVLILCGFVYLLTHSPWGRVLKAVR 192

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           +++ A  SL   +   K+ A  +     G+AG F A     I+PD +  ++       +I
Sbjct: 193 EDEDAARSLGKNVFVYKMQALVLGGVIGGLAGVFNALQTKSINPDFYSTAQTFFAFGALI 252

Query: 275 LGGMTSLSKIAKATAILIGVV----ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           LGG  ++        +   ++     L           L   +         L+ + + L
Sbjct: 253 LGGAATVFGPVVGAMLFWFLLAIPDALLRQAISGENPLLSLTEQQVGATRYVLLGLMIAL 312

Query: 331 VILMRSHSLLRLRTP 345
           +++ R   +L  +  
Sbjct: 313 LMVFRPQGILGNKRE 327


>gi|319937171|ref|ZP_08011578.1| hypothetical protein HMPREF9488_02413 [Coprobacillus sp. 29_1]
 gi|319807537|gb|EFW04130.1| hypothetical protein HMPREF9488_02413 [Coprobacillus sp. 29_1]
          Length = 315

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 60/291 (20%), Positives = 127/291 (43%), Gaps = 26/291 (8%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I  + A++    +   + +     Y   + I   I ++ A  L++  G LG L+L     
Sbjct: 11  ISFVCALLIYGGMMFAMSSGIINTYWSGILIVACINIVLATSLNLASGYLGQLTLGHAGF 70

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            ++GAY   +      +   + + + A+++   G+I+G+P+L+ +GDYL I TL  +EI 
Sbjct: 71  MSVGAYVSALCSIYMQVPFIVSLLIGALVAAVVGLIIGIPTLRLKGDYLCIITLAFNEII 130

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           + I++    ITNG  G+                                    +     +
Sbjct: 131 RVIMLN-IDITNGAKGLMGIPPSTDFT-------------------------AVFLSAVV 164

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  +I  + ++    A  +IR+++ A         + K+ AF +S+ F G+AG  +A   
Sbjct: 165 TIYVIYCIVKSRHGRAIISIREDETASELAGIPTSYYKILAFTISAFFAGLAGGLYAHYI 224

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
             + P +F +++++ ++ +V+LGG+ +L     A  ++  + E     + Y
Sbjct: 225 TILIPKVFDYNKSVEILVMVVLGGLGNLKGSVIAAIVMTILPEYLRAFSEY 275


>gi|91976327|ref|YP_568986.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91682783|gb|ABE39085.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 328

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 68/313 (21%), Positives = 126/313 (40%), Gaps = 24/313 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                  Y+ ++ +  L+Y   +   +I+ G  G +SL   + + +GAY+  +L +++G+
Sbjct: 27  PLFVKDVYVQNIMVLTLMYAALSQAWNILGGYCGQISLGHALYFGLGAYTTALLFTKFGV 86

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +    +IS    M +G P+ + RG Y  IAT++++EI   +   W          
Sbjct: 87  LPWFGMLGGGLISAVIAMALGYPTFRLRGHYFVIATIVIAEIGFLLFHNWDWAGAALGID 146

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                  +                     ++  YY  L  C ++  +  WL  +     W
Sbjct: 147 IPVRGDSWAKFQFTR-------------SKLPYYYFALVFCCVAWLVTWWLENSKWGYWW 193

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIV 269
           R ++DN +A  SL   +  +K+ A AVS+    + G+F+A     I P+    F  ++++
Sbjct: 194 RAVKDNPEAAESLGVVVFNSKMGAAAVSAFLTAIGGSFYAQFVSYIDPESVMTFQFSLLM 253

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
               +LGG+ +L       AILI + EL           +             L    + 
Sbjct: 254 ALPAVLGGIGTLWGPVLGAAILIPLTELTRSFIGGSGRGV----------DLILYGTVIV 303

Query: 330 LVILMRSHSLLRL 342
           L+ L R   L+ L
Sbjct: 304 LISLARPEGLIGL 316


>gi|301057644|ref|ZP_07198722.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
 gi|300448258|gb|EFK11945.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
          Length = 331

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 24/323 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A++   ++  ++    S  Y+  +    ++Y++ A GL+IV G  GLL L  V  Y IGA
Sbjct: 12  AILIAAVILPWIPLGISTDYLLRVLTTAVLYMILALGLNIVPGFTGLLDLGYVGFYGIGA 71

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L   Y LS+W+++P++A      G+++G P+L+  GDY AI T   SE+   ++ 
Sbjct: 72  YTSGLLAIHYDLSLWIILPLAAANGALWGILLGAPTLRLTGDYFAIVTFGFSELVVLLIR 131

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +T G  G+         G  +    +F              YY+ + +  +   ++
Sbjct: 132 NELWLTRGPMGLPGISPPAIFGYPLTRGWQF--------------YYLAIFLMLVVLVVV 177

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L  + +  AW  IR+++ A       +I  K++AFA S+A   M GAF+A     I P
Sbjct: 178 VRLENSRLGRAWFAIREDEIAAQCCGINLIRYKVTAFAASAAIGAMGGAFYAKWFRFIHP 237

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           DMFKF E+I+++ +++ GGM S+        ILI + E+                 S   
Sbjct: 238 DMFKFWESILILCLIVFGGMGSIGGTMLGALILIPLTEILRS----------ALPQSMFN 287

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
               +  + L +++ +R   L+ 
Sbjct: 288 ARYLIYGLLLVIMMRLRPAGLIP 310


>gi|160896023|ref|YP_001561605.1| ABC transporter-like protein [Delftia acidovorans SPH-1]
 gi|160361607|gb|ABX33220.1| ABC transporter related [Delftia acidovorans SPH-1]
          Length = 630

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 47/336 (13%), Positives = 111/336 (33%), Gaps = 34/336 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +    +  L         +   +   I ++ M A GL ++ G  G+ S        IGA
Sbjct: 24  VLTVAAIALLAASWGFLPDFTVVILSYIGLFAMVAAGLVMLTGVGGMTSFGQAAFVGIGA 83

Query: 79  YSYVILGSRYGLS------------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           Y+   + +                  W+ + +  +I+     ++G  ++K +G YL + T
Sbjct: 84  YATAWVCTAPASVAALGGLVGAAGLPWVGLALGLLITFVVAWLLGAVTVKLQGHYLPLCT 143

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           +        +    + +  G+ GI     L                    +     M  V
Sbjct: 144 IAWGLSLYYLFGNMEFL-GGQTGITGIAPLV--------------IGGVSLASPRAMGVV 188

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  ++  ++  L  +    A R +R  +    S+       ++  F +++    ++G
Sbjct: 189 IWAVLLVALWLLHNLLDSREGRAIRALRGGRVMAESMGIDTAHYRVKLFVLAALLATLSG 248

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             +A  +  +SP  F  +  I  + + ++GG   L        ++  V +    +     
Sbjct: 249 WLYAHMQRFVSPAPFNLNVGIEYLFMAVVGGAGHLWGAVLGATLITLVKQKLQDILPALL 308

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +   F          +  + + LV+   +  L   
Sbjct: 309 GTSGNF-------EVIVFGLLMVLVLQRFAEGLWPT 337


>gi|117164903|emb|CAJ88454.1| putative branched-chain amino acid ABC transport permease
           [Streptomyces ambofaciens ATCC 23877]
          Length = 383

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 65/314 (20%), Positives = 118/314 (37%), Gaps = 7/314 (2%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 +   +G+  +   + A GLS++ G+ G LSL      A+GAY YV L    G  
Sbjct: 28  PFYLDAFWLRIGLFSMAAAIGAVGLSLLSGTAGQLSLGHAFFLAVGAYGYVWLAGEPGPG 87

Query: 92  IWLLIPVSAMISGACGMIMGL--PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +   +     +  A          + + +G YL +ATL +  +  ++L+    +T G  G
Sbjct: 88  LPPAVAAVLAVLLAGAAGGLFSPVAGRVKGVYLGVATLALVFLGHHVLLTADSVTGGFNG 147

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                 L   G T                 E  ++Y+ L +  L+      L R     A
Sbjct: 148 RS-VPPLEIGGFTFAETDPELTVLGVPFGAEERLWYLGLALFALTWFTARGLLRGRPGRA 206

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              +RD++ A   +   +   + SAF VSS + G+AG   A S  R+ PD F    ++  
Sbjct: 207 LVALRDSETAASVMGVHVARYRSSAFVVSSMYAGLAGVLLALSFRRVVPDYFSLLLSVDY 266

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY----FNSLLKFDCSFNMRHTTLMV 325
           ++++++GG+ S++        +  +  L                             L  
Sbjct: 267 LAMIVIGGLGSVAGATAGAVFVTALPLLMTRYADQLPLVATPGSGGGSIGPTEAARYLYG 326

Query: 326 IALFLVILMRSHSL 339
            A+ +++L     L
Sbjct: 327 AAIVVILLYAPDGL 340


>gi|297624576|ref|YP_003706010.1| inner-membrane translocator [Truepera radiovictrix DSM 17093]
 gi|297165756|gb|ADI15467.1| inner-membrane translocator [Truepera radiovictrix DSM 17093]
          Length = 370

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 54/309 (17%), Positives = 110/309 (35%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
           A    + +  +    LIY +   GL+IV G  G +S+       +GAY+  +L    G  
Sbjct: 45  APFMTRSLFRLFDIALIYTVAVMGLNIVTGYAGQISIGQAAFMGVGAYTAAVLARDVGGP 104

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           +            A  + +G       G ++ + +L +  ++  I      +    +  +
Sbjct: 105 VLGFESTIPFWFAALLLPLGGAVAAAVGAFVGLPSLRLKHLYLAIATLAFQVIFTWSVGH 164

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                      V  +  F        +   F YY  L +  + A  +  L R+    A  
Sbjct: 165 TPWLNQGGSIRVPRVSFFGEEIRGSALIGPFYYYFALVVVIILAVAMRNLLRSKFGRALV 224

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +RDN +A  ++       K+ AFA++  + G+AGA  A     +  + F    +I  ++
Sbjct: 225 AVRDNDRAADAMGIDPGRTKVMAFAIAGFYAGVAGALLALYDGSVIIESFTLGISINFLA 284

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           + I+GG+ ++       A L  +         +    +            T+  + + L 
Sbjct: 285 MAIVGGLGTMVGSLIGPAFLTFLDPWVESFAGFVGGFMPATIDVATAMRPTVFGLIIVLF 344

Query: 332 ILMRSHSLL 340
           ++     L 
Sbjct: 345 LIFEPRGLA 353


>gi|84387635|ref|ZP_00990652.1| putative ureashort-chain amide or branched-chain amino acid uptake
           ABC transporter permease protein, possibly fusion
           [Vibrio splendidus 12B01]
 gi|84377480|gb|EAP94346.1| putative ureashort-chain amide or branched-chain amino acid uptake
           ABC transporter permease protein, possibly fusion
           [Vibrio splendidus 12B01]
          Length = 539

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 98/306 (32%), Gaps = 21/306 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+   GL+I  G +G++++       IGAY+  ++       I L + +S   
Sbjct: 254 LSLGSVLVLAGIGLAITFGVMGVINMAHGELIMIGAYTTYVMQLLMPNHIGLALILSIPA 313

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++G+   +    +L    L      + +L  +      +  +           +
Sbjct: 314 AFIVSGLVGIVIERSVIRHLYGRPL------ETLLATFGISLILQQAVRSIFSPLNRSVS 367

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +      +  +       Y++L    +   +++ L++T +    R +  N+    +
Sbjct: 368 TPEWMSGALQLNPMLSLTYNRLYIILFCGLVFMGLLMVLKKTPLGLQVRAVSQNRGMARA 427

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           F + S   G+AG   +   +         +  I    +V+ GG+ +L 
Sbjct: 428 MGIRSERVDAMTFGLGSGVAGVAGVALSQLTNV--GPNMGQAYIIDSFMVVVFGGVGNLW 485

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L    ++                         L+++ + L I  R   L   
Sbjct: 486 GTLVAGLSLGLFNKILEPWAGAVLAK-------------ILVLVFIILFIQKRPRGLFPQ 532

Query: 343 RTPSNF 348
           R  +  
Sbjct: 533 RGRAAE 538


>gi|84502917|ref|ZP_01001030.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
 gi|84388900|gb|EAQ01770.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
          Length = 652

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 98/304 (32%), Gaps = 28/304 (9%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---RYGLSIWLLIPVSAMISG 104
           IY + A GL+I  G +G++++       +GAY+  ++      Y +SI + IPV+  ++ 
Sbjct: 371 IYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVIQQIIPNYTVSILVAIPVAFAVTF 430

Query: 105 ACGMIMGLPSLKFRGDYLAIA-TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
             G+ M       R  Y     TL+ +      L +      G     +           
Sbjct: 431 GAGVAMERLV--IRWLYSRPLETLLATFGISIALQQIAKNVFGTQARPLTSP-------- 480

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
              +      +  V        + +      A  +  +++T +    R +  N +   S+
Sbjct: 481 -GWLDGAWIMNDVVSISYIRIAIFVLALVFLAVFLFIMKKTRLGLETRAVTQNPRMAASM 539

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
                   +  F + S   G+AG          S     +         V++GG+ ++  
Sbjct: 540 GINPDRVNMLTFGLGSGIAGIAGVAIGLYAKVTSELGSDYIVQS--FMTVVVGGVGNIWG 597

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                 ++  + +    +N     +   +   F +                R   ++ LR
Sbjct: 598 TLLGATMIGFLQKGIEWLNPSNTLAAQTYMIVFIIIFIQF-----------RPRGIIALR 646

Query: 344 TPSN 347
             + 
Sbjct: 647 GRAA 650


>gi|311103746|ref|YP_003976599.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310758435|gb|ADP13884.1| inner-membrane translocator 6 [Achromobacter xylosoxidans A8]
          Length = 332

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 61/325 (18%), Positives = 140/325 (43%), Gaps = 30/325 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A++  + + L +    +  Y+  +   ++++V+ A GL +V+G  G  +L+    Y +G 
Sbjct: 8   ALLALMAVVLAILPFAASGYVIYVVNLLMVFVVLALGLHLVIGETGQFALSHAAFYGVGI 67

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  ++ + +    ++ I    +++ A G ++G  +L+ R  YLA++T    E  Q + +
Sbjct: 68  YTAGLINNLWHPPFFISIVAGGLLAAALGYVIGALALRMRDIYLALSTFAFGEAMQWVFL 127

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W+ +TNG  G  ++    F                  ++ +   Y  ++ +  L     
Sbjct: 128 NWQSVTNGSNGFRISPATLFGYE---------------LVSDAKAYPFVVLIAALLLWAT 172

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L R+ + +A+R +R++  A  ++   +   K +AF +S+A+ G+AG  +      I P
Sbjct: 173 VALSRSQLGSAFRAVRESDVAAQAMGVNVNAIKRTAFTLSAAYAGIAGGMYTTFASFIHP 232

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           +   F   I+++++V++GG+ S+            + EL      +              
Sbjct: 233 ESLGFQTTILILTMVVVGGIGSVRGAIAGALAFGLISELLRQALSF-------------- 278

Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343
               +  + L   ++     L   R
Sbjct: 279 -QEIIYGVILMGFMMFAPKGLFAGR 302


>gi|229492753|ref|ZP_04386554.1| ABC branched chain amino acid transporter, permease component
           [Rhodococcus erythropolis SK121]
 gi|229320412|gb|EEN86232.1| ABC branched chain amino acid transporter, permease component
           [Rhodococcus erythropolis SK121]
          Length = 329

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 62/315 (19%), Positives = 124/315 (39%), Gaps = 6/315 (1%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +   +G   + Y + A GL++  G  GLL+   +    +G Y   I+   Y   +WL I
Sbjct: 10  SFAQLIGPSAIFYALLAIGLNLHFGYAGLLNFGQIGFALLGGYGVGIMTVTYDQPLWLGI 69

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIYVAD 154
            V    +G   +++G+P+L+ R DYLAI T+  SEI + I        +T    G++   
Sbjct: 70  LVGLTAAGLLALVLGIPTLRLRADYLAIVTIAASEILRLIFRSTASDSVTGSTNGLFGFA 129

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
             +   +   S  ++      F   +++   V   +  +    +  L  +      + +R
Sbjct: 130 DPFTALSPFDSAKQYSFLGVKFYGDDLWSMVVGWTLVLILCGFVYLLTHSPWGRVLKAVR 189

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           +++ A  SL   +   K+ A  +     G+AG F A     I+PD +  ++       +I
Sbjct: 190 EDEDAARSLGKNVFVYKMQALVLGGVIGGLAGVFNALQTKSINPDFYSTAQTFFAFGALI 249

Query: 275 LGGMTSLSKIAKATAILIGVV----ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           LGG  ++        +   ++     L           L   +         L+ + + L
Sbjct: 250 LGGAATVFGPVVGAMLFWFLLAIPDALLRQAISGENPLLSLTEQQVGATRYVLLGLMIAL 309

Query: 331 VILMRSHSLLRLRTP 345
           +++ R   +L  +  
Sbjct: 310 LMVFRPQGILGNKRE 324


>gi|311696988|gb|ADP99861.1| inner-membrane translocator [marine bacterium HP15]
          Length = 347

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 79/322 (24%), Positives = 137/322 (42%), Gaps = 15/322 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +   LL L +       Y+  +G  + I V+   GL+I+ G  GL+SL       +GA
Sbjct: 24  LWLGFFLLILLVFPFVVDSYLLYLGCLVGIAVISTTGLNILTGFTGLISLGQAGFMGVGA 83

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+   L     L   + + ++ +++ A G+++GLPSL+ +G YLAIATL  S     I  
Sbjct: 84  YTVAWLSINTALPFPVTLVLAGLMAAAVGILVGLPSLRVKGLYLAIATLAASVFLHFIFA 143

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +W+ +T G  G+ +     F  T     +                Y++++ +  L     
Sbjct: 144 EWESVTGGMGGLSLEPAHLFGLTFQSDFMM---------------YFIIVPLAVLMVLAA 188

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + RT I  A+  IRD   +   L   ++  KL +FA+SS + G+AG  FA     ++P
Sbjct: 189 RNVFRTRIGRAFIAIRDRDISAEILGINLLRYKLMSFALSSFYAGIAGGLFAYFYRVVTP 248

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F  S +I  ++ VI+GGM +L       A +  V E    +               + 
Sbjct: 249 ESFPLSMSIFYLAAVIVGGMGNLLGGILGAAFMTLVPEALKLLTAALTPFYPNAPVFMSP 308

Query: 319 RHTTLMVIALFLVILMRSHSLL 340
               +    +   ++   H L 
Sbjct: 309 MLEIIFGALIVGFLIFEPHGLA 330


>gi|315505567|ref|YP_004084454.1| inner-membrane translocator [Micromonospora sp. L5]
 gi|315412186|gb|ADU10303.1| inner-membrane translocator [Micromonospora sp. L5]
          Length = 381

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 64/342 (18%), Positives = 139/342 (40%), Gaps = 19/342 (5%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +   +L  LAV       + L   +   Y +    ++  ++    G +++VG  G L
Sbjct: 27  REARGSTLLRHLAVAVFAGTLVVLVTNQLAPYQNLQVARVCAFLCVTAGHTVLVGLNGQL 86

Query: 67  SLNCVIAYAIGAYSYVI-------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           SL      A GAY+  +          R   ++   + V+  ++   G+++GL + + RG
Sbjct: 87  SLGHGALMATGAYTVALTQQALDERAVRGWWTLPASLLVAVAVTALGGLVVGLAAARLRG 146

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
            YLA  TL ++ +   +   +  + NG+ G+    +                   ++   
Sbjct: 147 PYLAGVTLAVATLVPAVTTIFTGVFNGEQGLRFPAQTPPAAL------------GAYFQP 194

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
           E ++ ++ LG   L+  ++  L R+    + R +RD++ A       +   ++ AF VS+
Sbjct: 195 ERWLAWIALGAALLTMLLLANLVRSRFGRSLRAVRDDEVAARLAGIPVARTQVLAFVVSA 254

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  G+ G  +A     ++P  F    ++ ++  +++GG+ SL+       +L+ + +L  
Sbjct: 255 ACAGLGGGVYAMLTATVAPGKFPLDLSLFLLMAIVIGGLGSLAGAVWGAVLLVALQDLPG 314

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            +  +   S              +  + L +V+L     L  
Sbjct: 315 LLTEHLNLSAGLAQRLEGNLALAVFGLILIVVMLAAPGGLQG 356


>gi|222086815|ref|YP_002545349.1| urea or short-chain amide ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221724263|gb|ACM27419.1| urea or short-chain amide ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 541

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 98/297 (32%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAYS  ++ S    S   L   S  I+     ++ 
Sbjct: 262 AAIGLAITFGVMGIINMAHGEMVMLGAYSTFMVQSVIRTSYPELFDWSLAIALPVAFVVT 321

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       +   +     + +L  W      +  +              S      
Sbjct: 322 GAVGLVIER--GVIRFLYGRPLETLLATWGISLILQQAVRSIFGPTNQEVGNPSW-MSGS 378

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F   ++ +     ++++    +  +++L L+R+A     R +  N++   S+     +  
Sbjct: 379 FDIGYLSFTWNRLWIIVFSLGVFVALLLLLKRSAFGLQMRAVTQNRRMASSMGIRTPWVD 438

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              FA+ S   GMAG   A S+          S  I    +V+ GG+ +L         L
Sbjct: 439 AFTFALGSGIAGMAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFSL 496

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             + +                          L+++ + L I  R   L  L+  +  
Sbjct: 497 GILNKFLEPYAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 540


>gi|39996831|ref|NP_952782.1| branched-chain amino acid ABC transporter permease [Geobacter
           sulfurreducens PCA]
 gi|39983719|gb|AAR35109.1| branched-chain amino acid ABC transporter, permease protein
           [Geobacter sulfurreducens PCA]
 gi|298505846|gb|ADI84569.1| branched-chain amino acid ABC transporter, membrane protein
           [Geobacter sulfurreducens KN400]
          Length = 326

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 73/317 (23%), Positives = 139/317 (43%), Gaps = 29/317 (9%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           LL L L    ++ Y+ ++ + + I+ M A  L++++G  G +SL     + +GAY+  IL
Sbjct: 19  LLILALPTFIAEGYLLNVFVFVGIHTMLAVALNLLLGYAGQISLGQAAFFGLGAYASGIL 78

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            + +  + WL + V A   G     +G P LK +G YLA+ATL    I   +  +   +T
Sbjct: 79  TATHEWNPWLAMVVVAAAVGTLAFAIGFPILKLKGHYLAMATLGFGIIVYILFNEAVELT 138

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G +G      L     T  S ++               YY++ G+  ++  + + L  +
Sbjct: 139 GGPSGFPGIPNLAVGSVTFDSDLKN--------------YYLIWGIALVTILLSVNLVNS 184

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            I    R I D++ A   +   +   K+  FA+S+    +AG+ +A +   +SP  F F+
Sbjct: 185 RIGRGLRAIHDSEVAARVMGVNVRLLKVQVFALSAVISSVAGSLYAHTMTFVSPTSFGFN 244

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
            ++ ++++VI+GG+ S+        +L  + EL      Y                  + 
Sbjct: 245 FSVELVTMVIIGGLGSIYGSFLGATLLTLLPELLRAFQDY---------------DIVVY 289

Query: 325 VIALFLVILMRSHSLLR 341
            + L  + +     L+R
Sbjct: 290 GLLLIFMTMFMPGGLVR 306


>gi|134299578|ref|YP_001113074.1| inner-membrane translocator [Desulfotomaculum reducens MI-1]
 gi|134052278|gb|ABO50249.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Desulfotomaculum reducens MI-1]
          Length = 300

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 70/322 (21%), Positives = 138/322 (42%), Gaps = 41/322 (12%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           + +     Y   +   + IY++ A GL+++ G  G LS       +IGAY+  I   + G
Sbjct: 4   IFSMFLNDYYIQVLTMLGIYLIGALGLNLITGVTGQLSFGHAAFLSIGAYTSAIFSVKLG 63

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +S  + I    ++SG  G+++G P+L+  GDYL IATL   EI + + +    IT G  G
Sbjct: 64  MSFPVAIIAGGLMSGFWGILLGYPTLRLTGDYLGIATLGFGEIVRVVFLNL-SITGGALG 122

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +    R   L                           ++ +  ++   ++ L  +    +
Sbjct: 123 MAGIPRSSSLTV-------------------------VILVVIVTVWAMVRLENSRFGRS 157

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              IR+++ A  ++   I  +K++AFA+ +   G++G  +A     ++P  F F ++   
Sbjct: 158 LLAIREDEIAAEAMGVNITTSKITAFAIGTFIAGVSGGLYAHLLTYLNPSDFGFLKSFEF 217

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           ++ V+LGG+ S+  +   T+IL    E    +  Y                  +  + + 
Sbjct: 218 LTFVVLGGLGSIPGVILGTSILTLAPEFLRFIADY---------------RMMVYGLLMV 262

Query: 330 LVILMRSHSLLRLRTPSNFLER 351
           +++++R   LL     S  L +
Sbjct: 263 VMMIVRPRGLLGGVKVSRILNK 284


>gi|303327668|ref|ZP_07358108.1| high-affinity branched-chain amino acid transport protein
           [Desulfovibrio sp. 3_1_syn3]
 gi|302862029|gb|EFL84963.1| high-affinity branched-chain amino acid transport protein
           [Desulfovibrio sp. 3_1_syn3]
          Length = 343

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 75/323 (23%), Positives = 139/323 (43%), Gaps = 31/323 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +   +   L         Y   + + I +Y + A  L++++G  G+  +     YA+GAY
Sbjct: 6   LYILMGALLCGLPLVCNPYWLDVCVMIGLYALLALSLNVILGQAGIFHMGHAAFYAVGAY 65

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              IL +     I+  +P++   +    +++  P +  RGDYL I T+ + EI +  LI 
Sbjct: 66  VTAILNTLCHWPIFWTMPLAGAAAALFALLVARPIIHLRGDYLLIVTIGIVEIVRIALIN 125

Query: 140 -WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +T G  GI+   R  F G                ++  +  YY++ GM  +S  + 
Sbjct: 126 DVFGLTGGSNGIFGISRPRFFGYK--------------IVKSVQFYYLVWGMVGVSLLLF 171

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+    A   I+++  A       +   KL AF + + + GMAG  +AA    I+P
Sbjct: 172 YGLWRSRFGRALNYIKEDDVAAEGCGVNVTRYKLLAFVLGAFWAGMAGTVYAAKMVTIAP 231

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F F E++I+ ++VIL G  S   +  +  + IG+ E+                  F+ 
Sbjct: 232 ESFNFMESVIIFAVVILSG-GSQLGVLVSAFLFIGLPEVLR---------------EFSA 275

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
               +  +A+ ++++ R   LL 
Sbjct: 276 ARMLIFGLAMMVMMIWRPQGLLP 298


>gi|302868036|ref|YP_003836673.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029]
 gi|302570895|gb|ADL47097.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029]
          Length = 381

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 64/342 (18%), Positives = 139/342 (40%), Gaps = 19/342 (5%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +   +L  LAV       + L   +   Y +    ++  ++    G +++VG  G L
Sbjct: 27  REARGSTLLRHLAVAVFAGTLVVLVTNQLAPYQNLQVARVCAFLCVTAGHTVLVGLNGQL 86

Query: 67  SLNCVIAYAIGAYSYVI-------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           SL      A GAY+  +          R   ++   + V+  ++   G+++GL + + RG
Sbjct: 87  SLGHGALMATGAYTVALTQQALDERAVRGWWTLPASLLVAVAVTALGGLVVGLAAARLRG 146

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
            YLA  TL ++ +   +   +  + NG+ G+    +                   ++   
Sbjct: 147 PYLAGVTLAVATLVPAVTTIFTGVFNGEQGLRFPAQTPPAAL------------GAYFQP 194

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
           E ++ ++ LG   L+  ++  L R+    + R +RD++ A       +   ++ AF VS+
Sbjct: 195 ERWLAWIALGAALLTMLLLANLVRSRFGRSLRAVRDDEVAARLAGIPVARTQVLAFVVSA 254

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  G+ G  +A     ++P  F    ++ ++  +++GG+ SL+       +L+ + +L  
Sbjct: 255 ACAGLGGGVYAMLTATVAPGKFPLDLSLFLLMAIVIGGLGSLAGAVWGAVLLVALQDLPG 314

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            +  +   S              +  + L +V+L     L  
Sbjct: 315 LLTEHLSLSAGLAQRLEGNLALAVFGLILIVVMLAAPGGLQG 356


>gi|71906008|ref|YP_283595.1| inner-membrane translocator [Dechloromonas aromatica RCB]
 gi|71845629|gb|AAZ45125.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Dechloromonas aromatica RCB]
          Length = 310

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 61/323 (18%), Positives = 125/323 (38%), Gaps = 30/323 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +   + + L L       +   + +++ I  +   GL++++G  G +SL       IGAY
Sbjct: 9   LYVVIAILLVLPFVMPNSFYLDLAVRMAINAVIVLGLNLLIGFAGQISLGHAGFLGIGAY 68

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  +L + +G    L +   A+ +G    ++  P  K +G+YLA+ATL +  I    L  
Sbjct: 69  ASAVLPTHFGWHPLLAMGAGAVATGILAAVVARPIFKLKGNYLAMATLGLGIIISIALRN 128

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
               T G  G+ V                        +  +   Y+V+  +  +S    L
Sbjct: 129 EAQWTGGPDGMPVPA---------------MGLFGFELSNDKQWYWVVALLLSVSVWASL 173

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  +    A R +  ++ A   +   ++  K++ F +S+ F  + G+  A     +SP+
Sbjct: 174 NLIDSPFGRALRALHGSEVASQVVGVDVVRYKVAIFVLSAVFASLMGSVTAHYVGFVSPN 233

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
              F  +I ++++V++GGM S+        +L  + +                       
Sbjct: 234 FADFFHSIELVTMVVIGGMASVYGSLVGAVLLTALPQALATFEG---------------W 278

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
            T +    L L ++     L+  
Sbjct: 279 ETVVFGAILMLSMIFLPKGLVPT 301


>gi|312879927|ref|ZP_07739727.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Aminomonas paucivorans DSM 12260]
 gi|310783218|gb|EFQ23616.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Aminomonas paucivorans DSM 12260]
          Length = 335

 Score =  109 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 67/328 (20%), Positives = 124/328 (37%), Gaps = 24/328 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L     V  L     +       +   + I +L+Y   +   +I+ G  G +S    + +
Sbjct: 10  LLWYGFVALLAALPLVPGLIGNSFRAHVFILVLLYASMSQAWNILGGYCGQVSFGHSVFF 69

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IGAY   +    YG + WL   + A+ + A  +++  P  K +G Y AIAT  + EIF 
Sbjct: 70  GIGAYGAGLAVVTYGGTPWLGALLGALAASAVSVLVSYPCFKLKGHYFAIATFAIVEIFN 129

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + + W  +       Y      +      +    +             YY  LG+  L 
Sbjct: 130 RLFMVWDWVGGALGLDYPILPDGWKDFVWTNTKEGY-------------YYGALGLFVLV 176

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             ++ W+ R  +    R +R+ Q+   SL       KL+A A S+   G+ GAFF     
Sbjct: 177 FGVVRWIERHRLGAYLRAVREGQETAESLGVNSTVVKLAAMASSAFLAGLCGAFFVQYNF 236

Query: 255 RISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           R+ P M      ++  + + ILGG+ +        A+LI + E          + +    
Sbjct: 237 RVDPPMVMSLDMSMKFVLVTILGGVGTFLGPLLGAAVLIPLQEYTRAYLGSLGSGM---- 292

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    +    + L+++ +   ++ 
Sbjct: 293 ------DLIIFGALIILMMVKQPRGIMG 314


>gi|192292938|ref|YP_001993543.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|192286687|gb|ACF03068.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 357

 Score =  109 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 74/343 (21%), Positives = 156/343 (45%), Gaps = 27/343 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           +IF  R ++   IL ++ V +               Y  S+ IQI I+ + A GL+I+VG
Sbjct: 21  TIFPTRTSRNAAILGIVLVCFA--------PLVLSGYWLSILIQIGIFGIAALGLNILVG 72

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G +S+     + +GAY+   L + + + ++  IP++ +++   G++ G+P+ + +G Y
Sbjct: 73  FTGQISIGHAAFFLLGAYTSAYLNNHFPIPVFFAIPLAGLVTALVGLVFGVPAARLKGLY 132

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           L IATL    I  +   + +  + G                V ++   F      +  + 
Sbjct: 133 LVIATLAAQYILIDFFSRAEWFSGGS---------------VPAMANPFSLFGYVLQGDK 177

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +YV+L    +S  ++  L RT    A   +RD+  +   +   +   +  +FA+++ F
Sbjct: 178 QYFYVVLAYLLVSYILVTNLMRTRDGRALVAVRDHYLSAEIMGINLTKYRTLSFALAAFF 237

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE----L 297
            G+AGA +A  +  +S + F    +I+ ++++I+GG+ S+S     TA ++ + E    L
Sbjct: 238 AGIAGALYAHYQLVVSNEGFGIERSILFLAMIIIGGIGSISGTLMGTAFVVLLPETMEWL 297

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
             G+     +  L+ + +        + + + L ++     L 
Sbjct: 298 SSGLKGSAIDRALELNNNLTFLREIAIGLIIILFLVFEPDGLA 340


>gi|298294170|ref|YP_003696109.1| inner-membrane translocator [Starkeya novella DSM 506]
 gi|296930681|gb|ADH91490.1| inner-membrane translocator [Starkeya novella DSM 506]
          Length = 344

 Score =  109 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 64/334 (19%), Positives = 123/334 (36%), Gaps = 35/334 (10%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  LL F  +    + +Y+    I   I+++ A  L++++G  G LSL  V  + IGAY+
Sbjct: 7   IIVLLFFASVPWWLTDQYLLHTLITTGIFILAAMSLNLLLGYTGQLSLGHVAFFGIGAYT 66

Query: 81  YVILG-------------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
             +                       L +    +++  CG ++G  S + RG Y  I T+
Sbjct: 67  SALTALGFDVELFGLFRVVHEPWPPVLGLLFGTLVAALCGFVIGKLSFRVRGAYFVIVTI 126

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +E+ + + + W  +T G   +     L            F       +  +   YYV+
Sbjct: 127 SFAEVTRLVSLNWVELTQGPLALPGIPPLTIG---------FPGLGYMTLWEKTENYYVV 177

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    L+  +I  L  +    A   ++ N+    S+   +    + A  VS+   G AGA
Sbjct: 178 LAFIVLAYILIKRLVNSRFGRAMIALKGNESLATSVGIDVTRYLVIAAIVSAGMAGCAGA 237

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A     I P +F F   + ++ +VI GG  +L+       I      +          
Sbjct: 238 LYAHYIQIIDPMIFMFLNTVTMVIMVITGGKGTLAGPLVGGLIFGLAPVVLRSYVG---- 293

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                          L  + + +V+ +    ++ 
Sbjct: 294 ---------PEIQWILYGLLMIVVVFVLPQGIVP 318


>gi|46198524|ref|YP_004191.1| branched-chain amino acid transport system permease protein livM
           [Thermus thermophilus HB27]
 gi|46196146|gb|AAS80564.1| branched-chain amino acid transport system permease protein livM
           [Thermus thermophilus HB27]
          Length = 355

 Score =  109 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 66/306 (21%), Positives = 120/306 (39%), Gaps = 21/306 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y   +   + I  + A GL ++VG  G +SL       +GAY+   L         L I
Sbjct: 56  PYPMYVATLVAIGALSALGLHLLVGGAGQISLGHAAFMGVGAYAASHLTGPLA---PLGI 112

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +   I+   G+++GLPSL+ +G YLAIATL    +   +   W+ +T G  G  +    
Sbjct: 113 LLGGGIAAFLGLLLGLPSLRIKGVYLAIATLAFQFLADYVFKTWEAVTGGIRGRTLPPPE 172

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                               +     ++Y++L            L  T    A+R +RDN
Sbjct: 173 ---------------VLGLVLDTPEKLWYLVLLFALPLFFYGKRLLMTRAGRAFRAVRDN 217

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             +       +   KL AFA+S+ + G+AG   A     ++P+ F  S +I  +++VI+G
Sbjct: 218 DLSARVAGVDLTRTKLLAFALSAFYAGVAGGLLAGLYKAVTPEYFPLSVSIQYLAMVIVG 277

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  ++         ++ + E+              +          +    + L +++  
Sbjct: 278 GAGTVLGAVLGAFFVLLIPEVLNSFVGALGPE---YAAQLAAWRNVVFGGLILLFLVLEP 334

Query: 337 HSLLRL 342
             L+ L
Sbjct: 335 LGLVGL 340


>gi|163731682|ref|ZP_02139129.1| branched-chain amino acid ABC transporter permease [Roseobacter
           litoralis Och 149]
 gi|161395136|gb|EDQ19458.1| branched-chain amino acid ABC transporter permease [Roseobacter
           litoralis Och 149]
          Length = 319

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 72/325 (22%), Positives = 137/325 (42%), Gaps = 27/325 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            +     L  F+ L    + KY   + +  LI+V+ A G +++ G  G +S+       I
Sbjct: 8   AIFYAVALAGFILLPQFIAVKYYLHLSVLALIWVIAAQGQNLIQGYTGYVSIVQAGFMGI 67

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAYS  ++G  + L +WL I ++  ++    ++ G PSL+ +G Y AI TL  + +   +
Sbjct: 68  GAYSTALMGIHFDLPVWLTITLAPFVTAFFALLTGYPSLRVKGHYFAIVTLAFNMVIFIV 127

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           L+ +  +T G+AGI    +            R               YY +L +  L  +
Sbjct: 128 LMNFHQLTQGEAGITGIPKPGDNNGMFNWRDRE------------VYYYFVLIIAVLMTT 175

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +   + R+ I      IR N+    ++       KL AF +S+ F G+AGA +A  +  I
Sbjct: 176 LAALIIRSRIGQTLIAIRQNEDLVGAIGIAAWKYKLFAFVISAMFGGLAGALYAHYQSFI 235

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +P++F  ++++  I  VI+GG  +++        ++ + E                    
Sbjct: 236 NPEIFGVAQSLDAILAVIVGGSGTIAGPIIGAFFVVFLPEYLRF---------------A 280

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
           +     L  + L L  +     ++ 
Sbjct: 281 DSFRLILYGLVLVLATIFMPRGIVG 305


>gi|313680104|ref|YP_004057843.1| amino acid/amide ABC transporter membrane protein [Oceanithermus
           profundus DSM 14977]
 gi|313152819|gb|ADR36670.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Oceanithermus profundus DSM 14977]
          Length = 353

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 69/323 (21%), Positives = 133/323 (41%), Gaps = 16/323 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A +   L+ + +      +    +   ILIY +   GL+I+ G  GL+++       +GA
Sbjct: 29  ASLVVFLIGMLVLPQFLSRGNMQILDLILIYALAVLGLNIITGYAGLINIGHAAFLGVGA 88

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  ++     L  W ++PVS +++ A G ++G+P+L+ +  YLAIATL    IF+  + 
Sbjct: 89  YTAALVA--PYLPFWAVLPVSGLVAAAAGAVVGIPALRIKHLYLAIATLAFQLIFEWAV- 145

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                         +  L   G      + F  +   F  +  F YYV   +  + A   
Sbjct: 146 ------------GHSPALEQGGAMAMPRVVFLGYKVGFKNHHYFWYYVTFVVLVIMAFGF 193

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L RT    +   +RDN +A  ++       K+ AFA+ + + G+AGA +A     +  
Sbjct: 194 RNLLRTRFGRSLVAVRDNDRAADAMGMDPGRTKVFAFALGAFYAGVAGALYAYWSRAVVI 253

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + +    +I  +++ I+GG+ +L       A L  +       +++              
Sbjct: 254 EDYSLMISIKFLAMAIVGGLGTLVGSFFGPAFLELLDINMETFSYWIKTIYNPPGVDVGS 313

Query: 319 R-HTTLMVIALFLVILMRSHSLL 340
                   +A+ L ++     L 
Sbjct: 314 AIRPLAFGLAIVLFLIFEPRGLA 336


>gi|163796039|ref|ZP_02190002.1| inner-membrane translocator [alpha proteobacterium BAL199]
 gi|159178794|gb|EDP63332.1| inner-membrane translocator [alpha proteobacterium BAL199]
          Length = 387

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 60/337 (17%), Positives = 121/337 (35%), Gaps = 14/337 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             +    +L + +  +        +  +  I+ + A G +I+ G  G LS        +G
Sbjct: 32  FLIFALAVLTMPIWLSPIGAAYPDLVQKFAIFGILAIGFNILFGLTGYLSFGHAAFLGVG 91

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           +Y+ V       ++I   I    +  G   +++G  SL+  G Y +I TL  +++  N+ 
Sbjct: 92  SYAAVWSFKLLTMNIVPAILFGVLAGGVFALLIGYVSLRRTGIYFSILTLAFAQMSYNLA 151

Query: 138 IK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                PITNG+ G+ +A     +                 +      +YV   M  L+  
Sbjct: 152 YSVLTPITNGETGLQLALHDPRILDGPAGAGLPSTNLFGMLTVGYTGFYVCAVMLILAYY 211

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           + + +RR+    A R I+ NQ              L+AF +S  + G+AG+  A      
Sbjct: 212 LAMRIRRSPFGMALRAIKSNQNRMNYTGFNTRPYTLAAFVISGMYAGLAGSLMAVVDPLA 271

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK----- 311
             +  +++ +  V+ + ILGG  +L        I+     +    N      +       
Sbjct: 272 GAERMQWTASGEVVLMTILGGSGTLLGPVLGAGIIKYFENIFSAFNDQVLGRIFDFLPEG 331

Query: 312 --------FDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                   F           + +   L+++     ++
Sbjct: 332 LQEAAVVLFSPFVGEGWHLTLGVVFMLIVIFLPGGVM 368


>gi|163761455|ref|ZP_02168528.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Hoeflea phototrophica DFL-43]
 gi|162281299|gb|EDQ31597.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Hoeflea phototrophica DFL-43]
          Length = 651

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 99/311 (31%), Gaps = 26/311 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---RYGLSIWLLI 96
                   IY + A GL+I  G +G++++       IGAY+  ++      Y +SI + +
Sbjct: 362 LDGLSLASIYFLAAIGLAITFGVMGVINMAHGEFIMIGAYTGYVVQQIIPDYTVSIIVAL 421

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++  ++   G+ +    +     +  + TL+ +      L +      G     +    
Sbjct: 422 PLAFAVAFMAGVALERLVI-RHLAHRPLETLLATFGISIALQQIAKNIFGTQARPLTAP- 479

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   S +      +  V        + +        ++  L RT +    R +  N
Sbjct: 480 --------SWLDGAWVLNDVVSISYIRIAIFVLALIFLGLLLFILNRTRLGLEVRAVTQN 531

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +   S+        +  F + S   G+AG          S     +         V++G
Sbjct: 532 PRMASSMGINPDRINMLTFGLGSGIAGIAGVAIGLFAQVTSELGSSYIVQS--FMTVVVG 589

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++        ++  + +L    N     +   +   F +                R 
Sbjct: 590 GVGNIWGTLAGAGMIGSLQKLIEFFNPSNTLAAQTYMIIFIIIFI-----------QFRP 638

Query: 337 HSLLRLRTPSN 347
             ++ L+  + 
Sbjct: 639 KGIIALKGRAA 649


>gi|91781013|ref|YP_556220.1| branched chain amino acid ABC transporter ATPase/inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91693673|gb|ABE36870.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
           / amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Burkholderia xenovorans LB400]
          Length = 596

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 53/325 (16%), Positives = 117/325 (36%), Gaps = 23/325 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V    L L +       +  ++ I   +  +   GL ++ G  G+ S        + AY
Sbjct: 6   LVAVGCLALVVAPLVLPDFYTTLLIYTGLASIVVLGLVVLTGVGGMTSFGQATFVGLSAY 65

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +   + +  G S W+ +P++ +++     ++GL +++  G YL + T+  S     +   
Sbjct: 66  TTGAISTTLGWSPWVTLPIAVLLTCLAAAVIGLLTVRLSGHYLVLGTVAWSVGLYYLFGN 125

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +  G  GI     + F G ++                    YY++  +  ++    +
Sbjct: 126 LPFL-GGYNGISDIPPITFFGFSLAGSR--------------PSYYLIWAVVAVAVVCTM 170

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  +    A R++R N     S    I   +L  F  ++    ++G  +A     ++P 
Sbjct: 171 NLLDSRTGRAIRSLR-NPVLAESFGIDIYRLRLPVFIYAAFLAAISGWLYAHYFRFVNPA 229

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F F  +I    +++LGG T +        +L+    L      +     + +D      
Sbjct: 230 PFGFDGSIDYAFMLVLGGATQVFGAIVGAFVLVVGKMLLQIGLTHVLPGPVHWD------ 283

Query: 320 HTTLMVIALFLVILMRSHSLLRLRT 344
                 + +  +       +L  R 
Sbjct: 284 -QIFFGLLIIGLFHHARSGILSARR 307


>gi|256830969|ref|YP_003159697.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
 gi|256580145|gb|ACU91281.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
          Length = 318

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 76/324 (23%), Positives = 148/324 (45%), Gaps = 30/324 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +     L +         Y   +   + +Y + A  L++++G  GL  +     YAIGA
Sbjct: 6   ILYLAFALLMASCPMFLNAYWTDVFNNVGLYTILALSLNVILGHAGLFHMGHAAFYAIGA 65

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN-IL 137
           Y+  IL + +G+ +  ++P++ +++G   MI+  P +  RGDYL I T+ + EI +  ++
Sbjct: 66  YTTAILNTTFGIPVLWIMPLAGIMAGFFAMIVARPIIHLRGDYLLIVTIGIVEIVRIALI 125

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                IT G  GI+   R    G  +    +F              +Y++ G   ++  +
Sbjct: 126 NNVFDITGGANGIFGISRPSVFGYKISKPDQF--------------FYLIWGFAAVTIFL 171

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +L L  +    A   I++++ A       +   KL AF + + + GM G  +A+    I+
Sbjct: 172 LLRLEHSRFGRALMYIKEDEVAAGGSGINVSHHKLVAFIIGAVWAGMCGTIYASKMTIIA 231

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F F+E++++ +IVILGG  S+  +     +L+G+ E+  G+  Y             
Sbjct: 232 PESFSFAESVVLFTIVILGGAGSIPGVILGAFLLVGLPEVFRGLAEY------------- 278

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                +   A+ L+++ R+  LL 
Sbjct: 279 --RMLVFGAAMVLMMIFRNQGLLP 300


>gi|171057449|ref|YP_001789798.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
 gi|170774894|gb|ACB33033.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
          Length = 361

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 87/319 (27%), Positives = 148/319 (46%), Gaps = 17/319 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---------- 88
              +    L+YV+ A GL+IVVG  GLL L  V  YA+GAY Y ++ S +          
Sbjct: 31  WVRIMALALLYVLLALGLNIVVGYAGLLDLGYVAFYALGAYMYALVASPHLSLNFESVRA 90

Query: 89  ------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
                    IWL+IP +A ++   GM++G P+LK RGDYLAI TL   EI +  +   + 
Sbjct: 91  AFPTGMHYPIWLVIPAAACVAAVAGMVLGAPTLKLRGDYLAIVTLGFGEIIRVFMNNLEH 150

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
             N   G     ++  +     S  + +      +      YY+ L +   S  I   L 
Sbjct: 151 PVNITNGPRGISQIDSMNLFGFSFGKPYDLFGFVIPSVALYYYLFLVLVVGSVVICHNLE 210

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            + I  AW  IR+++ A  ++       KL AF + + F G++G+ FAA +  ISP+ F 
Sbjct: 211 NSRIGRAWMAIREDETAAKAMGLNTRNLKLLAFGMGATFGGVSGSMFAAFQGFISPESFT 270

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
             E+++++++V+LGG+  +  +     +L  + E+          S+        +    
Sbjct: 271 LMESVMIVAMVVLGGIGHIPGVILGALLLAALPEVLR-YVAGDVQSMTGGRLDAAILRQL 329

Query: 323 LMVIALFLVILMRSHSLLR 341
           L+  A+ +++L+R   L  
Sbjct: 330 LIASAMIVIMLLRPRGLWP 348


>gi|148979616|ref|ZP_01815621.1| branched-chain amino acid ABC transporter, permease protein
           [Vibrionales bacterium SWAT-3]
 gi|145961701|gb|EDK26998.1| branched-chain amino acid ABC transporter, permease protein
           [Vibrionales bacterium SWAT-3]
          Length = 542

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 98/306 (32%), Gaps = 21/306 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+   GL+I  G +G++++       IGAY+  +L       I L + +S   
Sbjct: 257 LSLGSVLVLAGIGLAITFGVMGVINMAHGELIMIGAYTTYVLQLLMPNHIGLALILSIPA 316

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++G+   +    +L    L      + +L  +      +  +           +
Sbjct: 317 AFIVSGLVGIAIERSVIRHLYGRPL------ETLLATFGISLILQQAVRSIFSPLNRSVS 370

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +      +  +       Y++L    +   +++ L++T +    R +  N+    +
Sbjct: 371 TPEWMSGALQLNPMLSLTYNRLYIILFCGLVFMGLLMVLKKTPLGLQVRAVSQNRGMARA 430

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           F + S   G+AG   +   +         +  I    +V+ GG+ +L 
Sbjct: 431 MGIRSERVDAMTFGLGSGVAGVAGVALSQLTNV--GPNMGQAYIIDSFMVVVFGGVGNLW 488

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L    ++                         L+++ + L I  R   L   
Sbjct: 489 GTFVAGLSLGLFNKILEPWAGAVLAK-------------ILVLVFIILFIQKRPRGLFPQ 535

Query: 343 RTPSNF 348
           R  +  
Sbjct: 536 RGRAAE 541


>gi|291448870|ref|ZP_06588260.1| branched-chain amino acid ABC transport permease [Streptomyces
           roseosporus NRRL 15998]
 gi|291351817|gb|EFE78721.1| branched-chain amino acid ABC transport permease [Streptomyces
           roseosporus NRRL 15998]
          Length = 392

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 71/324 (21%), Positives = 129/324 (39%), Gaps = 16/324 (4%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY---------- 81
                ++    G+  +   + A GL+++ G+ G LS+      A+GAY Y          
Sbjct: 36  PFYLDRFWLQAGLFAMAAAIGAIGLNMLTGATGQLSMGHAFFLAVGAYGYCVLAGESGTE 95

Query: 82  -VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                +  GL  WL   ++ +++GA G I    + + RG YL IATL +  I Q++L   
Sbjct: 96  NGHTLTGLGLPTWLAAILAVLLAGAAGGIFSPIAGRLRGAYLGIATLALIFIGQHVLFNA 155

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G  G  V     F  T   S +     P        +   + L +  L A  +L 
Sbjct: 156 GSLTGGYNGRAVPPLSVFGFTFDDSELIVAAVPFGSSEKLWYAGLLALLLSALFARGVLR 215

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
            R      A   IRD++ A   +   +   +   F +SS + G+AG   A    R  P+ 
Sbjct: 216 GR---PGRAMNAIRDHRIAAGVMGVPVARYRAGVFVLSSMYAGLAGVLLALVFQRTVPEY 272

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--YYFNSLLKFDCSFNM 318
           F    ++  ++++++GG+ S++      A +  + ++    +      ++      +   
Sbjct: 273 FGMILSLEYLAMIVIGGLGSVAGAVIGAAFVSLLPQVFTHYSDSLPLVSAPGTGGLAPGE 332

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
               L   A+  V+L     L RL
Sbjct: 333 ASRYLYGAAVVAVVLFLPGGLARL 356


>gi|254428075|ref|ZP_05041782.1| amino acid or sugar ABC transport system, permease protein,
           putative [Alcanivorax sp. DG881]
 gi|196194244|gb|EDX89203.1| amino acid or sugar ABC transport system, permease protein,
           putative [Alcanivorax sp. DG881]
          Length = 354

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 61/321 (19%), Positives = 124/321 (38%), Gaps = 28/321 (8%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  ++  L        +Y   +     ++ +  +G++I+ G  G L+L     +AIGAY+
Sbjct: 18  IVMIVAALLFPFVAGNEYQIYVMALAFVWAIAVYGMNIITGLCGQLNLAHGGFFAIGAYT 77

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             IL    G + W     +  +    G ++G+ SL+ +  Y AI TL +  I   +L KW
Sbjct: 78  LAILTVDNGWAFWPAFIAAGAVGAILGFLVGVISLRLKEHYFAIFTLCVGFIIYLLLDKW 137

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T+G  GI                     F           YY+ L    LS  +   
Sbjct: 138 EELTHGALGIINIPAPS-------------GFGLVDFTETTPFYYLALAFMVLSIWLASR 184

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +  + +   +  IR +     SL   ++  K+ AF +S+ +  +AGA +A     I P  
Sbjct: 185 IAHSLLGRTFLAIRISDDLAASLGINLMRNKVLAFVLSTTYASVAGALYAGMVRFIGPAE 244

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
            + +    +I+ +++GG+ +L      T  +  + +    +  Y                
Sbjct: 245 AEVTHTFDMITYLLVGGIGTLMGPLLGTLAITWLTQSLQFLEEY---------------R 289

Query: 321 TTLMVIALFLVILMRSHSLLR 341
             +    L ++++     ++ 
Sbjct: 290 MIVFGPMLVVLVIFFPKGVVG 310


>gi|293607062|ref|ZP_06689405.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292814552|gb|EFF73690.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 383

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 70/309 (22%), Positives = 131/309 (42%), Gaps = 20/309 (6%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-SRYGLSIW 93
              Y   + I+++IY +FA  L ++VG  GL+SL     + IGAY   +L       S+W
Sbjct: 20  GSDYYTGLAIKVMIYAIFALSLQLLVGGAGLVSLGHAAFFGIGAYVAALLSPESAAASLW 79

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
            L+P + + +    +  G  +L+ RG Y  + TL  S++   +      +  G  GIY+ 
Sbjct: 80  WLLPAALLAAALYALATGALALRTRGVYFIMVTLAFSQMAYYVFHD-TKVGGGSDGIYLY 138

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            R           +    +    +      Y+ +L    L+   +  LRR+    A   I
Sbjct: 139 FRPE---------LAVGGWVPFDLGNATTFYFFVLACLALAWGFLALLRRSPFGAALAGI 189

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R N++   +   +    KL+A+ V +    +AG  FA     ++P++  + ++ +V+ +V
Sbjct: 190 RINEQRMRAAGYSTYPYKLTAYVVGATLASLAGFLFALKDGFVTPELLAWEQSGLVLLMV 249

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ILGGM SL      T  L+ + EL      +           +       + IA+  ++ 
Sbjct: 250 ILGGMASLGGAVIGTVTLVLMQELFQSQALFG---------DYARHWHLPLGIAIIALVA 300

Query: 334 MRSHSLLRL 342
           +  + +  L
Sbjct: 301 LLPNGIAGL 309


>gi|152995844|ref|YP_001340679.1| ABC transporter-like protein [Marinomonas sp. MWYL1]
 gi|150836768|gb|ABR70744.1| ABC transporter related [Marinomonas sp. MWYL1]
          Length = 599

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 54/332 (16%), Positives = 117/332 (35%), Gaps = 31/332 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++   L+ L +       +  ++   I +Y +   GL ++ G  G+ S        +GAY
Sbjct: 6   LIIFGLVVLAIAPQVLPTFQVTLLNYIGLYALVVLGLVLLTGVGGMTSFGQAAFVGLGAY 65

Query: 80  SYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           S              +    S W+ + +  +++ A  + +G  +LK  G YL + T+   
Sbjct: 66  STAYLTTTEQLPSWLAWSAGSPWIGLLIGLILTAAVALFLGALTLKLSGHYLPLGTIAWG 125

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                +         G  GI     L   G  +    +              +YY++  +
Sbjct: 126 ISLYYLFGTMSS-MGGHTGISGLPSLSLFGVLLDKGEK--------------IYYLIWAI 170

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L+  I   L  +    A R ++  Q    S+      +K+  F +S+ F G++G  +A
Sbjct: 171 LMLAVWITSNLLNSREGRAIRALKGGQLMAESMGVNTFRSKMVIFLISALFAGISGWLYA 230

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            ++  ++P  F  S  I  + + ++GG+ S+        IL  + +              
Sbjct: 231 HTQRFVNPTPFGLSMGIDYLFMALVGGVGSVWGALLGAGILTMLKQWLQDWLPLVMGG-- 288

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                       ++ + +  ++      +  L
Sbjct: 289 -----NGQYEAIVLGLLIVFMMQRSPGGIWPL 315


>gi|289767397|ref|ZP_06526775.1| branched amino acid transport system permease [Streptomyces
           lividans TK24]
 gi|289697596|gb|EFD65025.1| branched amino acid transport system permease [Streptomyces
           lividans TK24]
          Length = 500

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 63/337 (18%), Positives = 131/337 (38%), Gaps = 25/337 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           AV   LLL +    T+   Y  S+ + + +    A GL  +VG  G +SL     +A+G 
Sbjct: 168 AVFVVLLLTVPAVFTRVPFYTMSVAVLMCLQATAALGLVPLVGRAGQISLGQAAFFAVGG 227

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL  R+ ++  L +   A ++ A   ++GL   + +G YLA+ATL    +  ++  
Sbjct: 228 YTSAILTGRWHVNALLALTAGAALAMAVAYVVGLFIFRAQGQYLALATLSFGLVVSSLAN 287

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +   +T    G+     L   G  + +               + +YY++ G+  ++   +
Sbjct: 288 QLP-LTGASNGLAGIPSLAPFGVELDTD--------------LSVYYLVAGVLLVAVLSV 332

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+   +A   + D+  A  +   +    +  A A+++    +AG+ +A     +  
Sbjct: 333 DALLRSPAGDALSALGDSPVATEAAGVSAAALRRGALALAAGLASVAGSLYAHWSSFMDS 392

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                  ++ ++ I  +GG+ +         +++   E    +          F  +   
Sbjct: 393 GQAGLLNSVQLLVIASVGGLRTPWGAPLGALVIVTFSEASKDLIPKV------FPSATGN 446

Query: 319 RHTTLMVIALFLVILMRSHSLLR----LRTPSNFLER 351
               +  IAL  V+L     +       R  S    +
Sbjct: 447 FDIIVYGIALIAVLLFLPRGVGGVTAVRRERSVRKRQ 483


>gi|149375945|ref|ZP_01893712.1| inner-membrane translocator [Marinobacter algicola DG893]
 gi|149359825|gb|EDM48282.1| inner-membrane translocator [Marinobacter algicola DG893]
          Length = 347

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 81/322 (25%), Positives = 139/322 (43%), Gaps = 15/322 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +   LL L +       Y+  +G  + I V+   GL+I+ G  GL+SL       +GA
Sbjct: 24  LWLGFFLLILMVFPFAVDSYLLYLGCLVGIAVISTTGLNILTGFTGLISLGQAGFMGVGA 83

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+   L    GL   + + ++ +++ A G+++GLPSL+ +G YLAIATL  S     I  
Sbjct: 84  YTVAWLSINTGLPFPITLVLAGLMAAAVGILVGLPSLRVKGLYLAIATLAASVFLHFIFA 143

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +W+P+T G  G+ +     F  T     +                Y++++ +  L     
Sbjct: 144 EWEPVTGGMGGLSLEPAHLFGLTFQSDFMM---------------YFIIVPLAVLMVLAA 188

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + RT I  A+  IRD   +   L   ++  KL +FA+SS + G+AG  FA     ++P
Sbjct: 189 RNVFRTRIGRAFIAIRDRDISAEILGINLLRYKLMSFALSSFYAGVAGGLFAYFYRVVTP 248

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F  S +I  ++ VI+GGM +L       A +  V E    +               + 
Sbjct: 249 ESFPLSMSIFYLAAVIVGGMGNLLGGILGAAFMTLVPEALKLLTAALTPFYPNAPVFMSP 308

Query: 319 RHTTLMVIALFLVILMRSHSLL 340
               +    +   ++   H L 
Sbjct: 309 MLEIIFGGLIVGFLIFEPHGLA 330


>gi|149378303|ref|ZP_01896012.1| inner-membrane translocator [Marinobacter algicola DG893]
 gi|149357410|gb|EDM45923.1| inner-membrane translocator [Marinobacter algicola DG893]
          Length = 550

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 97/306 (31%), Gaps = 21/306 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+ A GL+I  G +G++++       +GAY+   +         L +  S   
Sbjct: 265 LSLGSVLVLAAIGLAITFGVMGVINMAHGELIMLGAYTTWGMQQLLPGQPGLALIFSIPA 324

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                   G+   +    +L    L      + +L  +      +  +            
Sbjct: 325 GFLVAATAGIIIERSVIQFLKGRPL------ETLLATFGISLILQQLVRTVISPQNRTVV 378

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +      +  +   +   YVL     + A++++ +R+T +    R +  N+    S
Sbjct: 379 TPEWMSGSLVINDALSLTLNRLYVLAFALIVFAALMMIMRKTRLGLEVRAVTQNRAMARS 438

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +        +  FA+ S   G+AG   +   +         +  I    +V+ GG+ +L 
Sbjct: 439 MGIRATRVDIMTFALGSGVAGLAGVALSQLTNV--GPNLGQNYIIDSFMVVVFGGVGNLW 496

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L  + +L                         ++++ + L I  R   L   
Sbjct: 497 GTLIAGLSLGTINQLLEPWAGAVLAK-------------IIVLVFIILFIQKRPKGLFPQ 543

Query: 343 RTPSNF 348
           +  +  
Sbjct: 544 KGRAAE 549


>gi|94501624|ref|ZP_01308140.1| Branched-chain amino acid ABC-type transport system, permease
           components [Oceanobacter sp. RED65]
 gi|94426200|gb|EAT11192.1| Branched-chain amino acid ABC-type transport system, permease
           components [Oceanobacter sp. RED65]
          Length = 541

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 38/295 (12%), Positives = 97/295 (32%), Gaps = 21/295 (7%)

Query: 54  WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113
            GL+I  G +G++++       +GAY+  ++      +I + + V+   +     ++G+ 
Sbjct: 267 IGLAITFGVMGVINMAHGEMIMLGAYTTFVIQQLMPNNIGMSLVVAIPAAFLVSGLVGVI 326

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
             +    +L    L      + +L  +      +  +                +      
Sbjct: 327 IERTVIRHLYGRPL------ETLLATFGISLVLQQAVRSIFGPLNQDVITPDWLAGTFMV 380

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
           +  +       Y+++    + A + L L++T      R +  ++    S+     +    
Sbjct: 381 NPGLELTYNRLYIIIFSLMVLAGLALVLKKTLFGLQMRAVTMDRPMASSMGIKTGWVDAL 440

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            F + S   G+AG   +   +         +  I    +V+ GG+ +L         L  
Sbjct: 441 TFGLGSGIAGIAGVALSQLTNV--GPNLGQAYIIDSFMVVVFGGVGNLWGTLVGAMSLGV 498

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             ++   +                     ++++A+ L I  R   L  L+  +  
Sbjct: 499 ANKMFEPLAGAVLAK-------------IIVLVAIILFIQKRPRGLFALKGRAVE 540


>gi|284167400|ref|YP_003405678.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511]
 gi|284017055|gb|ADB63005.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511]
          Length = 358

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 61/326 (18%), Positives = 126/326 (38%), Gaps = 22/326 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L V   +L  L       Q +  ++ +++L + + A  L  V G  GLLS      Y 
Sbjct: 26  LTLLVGIAILAALGPVVQSVQPFWLNLLVRMLTFALLALSLDFVFGYAGLLSFGHAAMYG 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            G Y+  +L +    S  +++P++ +       I+G  S++ RG Y A+ TL  +++   
Sbjct: 86  AGGYAAALLVTEVTASALVVLPLAVVTGVIVATIIGWLSVRARGIYFAMLTLAFAQMLYV 145

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +     P T               G      I+ +          +  YY+ LG+  LS 
Sbjct: 146 VAFTDLPATIAG------METVTGGDNGLYGIQLYELFGIDFRERLNYYYLTLGIVALSL 199

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           + I+ L  +      + IR+N++    +   +   K+ AFA+S  F  +AGA +   +  
Sbjct: 200 AGIVRLANSPFGRVLQGIRENEERTEFIGYDVQRYKVIAFAISGGFASLAGALYVPFQSV 259

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            +P +  ++ +  ++ +V+LGGM +         +++ + +    +              
Sbjct: 260 ANPQLLHWTVSGELVVMVLLGGMGTFWGPMLGAGLVVFLEDRLGSVA------------- 306

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  ++      V++     L  
Sbjct: 307 ---SWEVILGSLFVAVVVFAPRGLAG 329


>gi|302874076|ref|YP_003842709.1| inner-membrane translocator [Clostridium cellulovorans 743B]
 gi|302576933|gb|ADL50945.1| inner-membrane translocator [Clostridium cellulovorans 743B]
          Length = 318

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 77/329 (23%), Positives = 138/329 (41%), Gaps = 41/329 (12%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V   LLF  + +     Y   +    LI ++ A  L+++VG  G L L      +IGAY
Sbjct: 17  IVIYFLLFGLIKSKIISNYYAGIINLTLINIILAVSLNLIVGFTGQLCLGHAGFMSIGAY 76

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              ++  + G  + + I   A+++     ++G P+LK  GDY AI TL   EI + I++ 
Sbjct: 77  VSAVITIKLGTPLVISIIAGAIVASIIAALIGYPTLKLTGDYFAITTLAFCEIIRIIIM- 135

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                 G  G+                                   ++L    ++  +I 
Sbjct: 136 NIDFVGGARGLTGIPLKSN-------------------------LLIILIFMTITIIVIY 170

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  ++   A  ++R+++ A  S+       K+ AF +++ F G+AG  +A     I P 
Sbjct: 171 NIIHSSQGRAMLSVREDEIAAESMGIHSFKYKILAFIIAAFFAGIAGGLYAHYIGYIQPT 230

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +F F+++I  ++ V+ GGM SLS    AT +L  + EL   +N Y               
Sbjct: 231 LFDFNKSIDYLTFVVFGGMGSLSGSVLATILLTFLPELLRDLNDY--------------- 275

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNF 348
              +  +AL L+++ R   LL  +  S  
Sbjct: 276 RMIIYPLALILLMIFRPQGLLGNKEVSLK 304


>gi|170721344|ref|YP_001749032.1| ABC transporter-like protein [Pseudomonas putida W619]
 gi|169759347|gb|ACA72663.1| ABC transporter related [Pseudomonas putida W619]
          Length = 828

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 65/321 (20%), Positives = 122/321 (38%), Gaps = 32/321 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +    +     A     Y   +     + V    GL+I++G  G +S   +  YAIGAY 
Sbjct: 12  LALFGVASIGLALGLDSYWLLILTLYALAVTVGVGLNILIGLSGQMSFGHIAFYAIGAYL 71

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +L       +   +P++ +     G ++ +P+L+  G YLA+ T+  + +  N LI+W
Sbjct: 72  SALLTLAGLP-LSGALPLAGLGCAVLGGLLAIPALRVSGPYLAMITIAFALVVHNGLIEW 130

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T G  G+                          +   + +    + +   +      
Sbjct: 131 RSVTGGANGLMGIPLPE----------------LGTLDPALLLALASVLLMLAALVFYWS 174

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L+R+    A R ++ ++ A  SL    +  +  AFA+S+   G AGA  A     I+P  
Sbjct: 175 LQRSGWGLAMRAVKASEIAARSLGVNPVQTRTLAFALSAGLAGAAGALVAPVLMFINPAA 234

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F FS++I+ +  VI+GG   L        +++ + EL      Y                
Sbjct: 235 FPFSQSILFVLAVIVGGAGMLFGPVLGALVIVLLPELLADFAEY---------------R 279

Query: 321 TTLMVIALFLVILMRSHSLLR 341
                + L  V+      +L 
Sbjct: 280 LLAFSVLLLAVLWAAPRGVLG 300


>gi|86750728|ref|YP_487224.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86573756|gb|ABD08313.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 328

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 69/327 (21%), Positives = 130/327 (39%), Gaps = 24/327 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L+       +   +       Y+ ++ +  L+Y   +   +I+ G  G +SL   + + +
Sbjct: 13  LIVATVLACIAALVPLFVKDVYVQNIMVLTLMYAALSQAWNILGGYCGQISLGHALYFGL 72

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +L +++G+  W  +    +IS A  + +G P+ + RG Y  IAT++++EI   +
Sbjct: 73  GAYTTALLFTKFGVLPWFGMLGGGLISAAIALALGYPTFRLRGHYFVIATIVIAEIGFLL 132

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
              W                 +                     ++  YY  L  C ++  
Sbjct: 133 FHNWDWAGAALGIDIPVRGDSWAKFQFTR-------------SKLPYYYFALVFCCVAWL 179

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +  WL  +     WR ++DN +A  SL   +  +K+ A AVS+    + GAF+A     I
Sbjct: 180 VTWWLENSKWGYWWRAVKDNPEAAESLGVVVFNSKMGAAAVSAFLTAIGGAFYAMFVSYI 239

Query: 257 SPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            P+    F  ++++    +LGG+ +L        ILI + EL           +      
Sbjct: 240 DPESVMTFQFSLLMALPAVLGGIGTLWGPVLGAVILIPLTELTRSFVGGSGRGV------ 293

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                  L    + L+ L R   L+ L
Sbjct: 294 ----DLILYGTVIVLISLARPEGLIGL 316


>gi|163741933|ref|ZP_02149322.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161384654|gb|EDQ09034.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
          Length = 361

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 71/325 (21%), Positives = 136/325 (41%), Gaps = 17/325 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L V   L++          ++       +LI+ +   GL ++ G  G  SL      AIG
Sbjct: 22  LLVYGALVMLALALPLLINEFYIGEVTNVLIWAIAGLGLMLLTGQTGQASLGHAAFLAIG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  IL  +      +  P++ +I+G  G I+ +P+L+  G YLAIAT+ +S +  +I+
Sbjct: 82  CYANTILIEQGLP-FVVAFPLAGVITGIVGGIIAIPALRLHGIYLAIATIALSILADDII 140

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +  +P T G +G                +IR F          +  YY++LG+  +    
Sbjct: 141 VFLEPWTGGVSGK------------FPDVIRLFGIEIERWTMPVRFYYLVLGVTVICTLF 188

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L R+ +  A+  +RD++ +  ++   I   K +AF +S    G AGA         +
Sbjct: 189 YRNLLRSPLGRAFAAVRDSEVSATAMGVHIARTKATAFGLSCMITGWAGALMGYYAGAFN 248

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            + F    +I ++ ++++GG+ S+        ++  + +    +      S+L    +  
Sbjct: 249 NETFSLVISITLLMMIVIGGLGSIHGAFFGAVVVAFLPQGLSILKD----SVLGSGVAIP 304

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
              T +  + L L IL     L   
Sbjct: 305 GLETGVFGMILILFILFEPMGLYGR 329


>gi|239623305|ref|ZP_04666336.1| ABC transporter [Clostridiales bacterium 1_7_47_FAA]
 gi|239522271|gb|EEQ62137.1| ABC transporter [Clostridiales bacterium 1_7_47FAA]
          Length = 342

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 73/323 (22%), Positives = 136/323 (42%), Gaps = 23/323 (7%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
              L + L + +     YI S+ +   +Y  F    +++ G  G +S       AIGAY+
Sbjct: 16  FVLLAVALLIPSIIKDNYIVSIILTCFLYGSFGMSWNVLGGFGGQISWCHSAFAAIGAYT 75

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
            +I  + +G+S  + +P+  ++S A   ++G  +L++RG + AI T+  +EI + IL+  
Sbjct: 76  ALIFYNFFGISPLISMPIGVLLSYAFATLLGKVTLRYRGPFFAITTIAFAEILRVILLNL 135

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             IT G AG+YV          V S  +               YY+ L +  +   +  +
Sbjct: 136 NSITGGSAGLYVRYNGEQPWNLVFSTDK-------------PFYYIALILMIIVLLVTKY 182

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI-SPD 259
           +  + +    R I+ ++ A  SL       KL AF +S+A I +AG  +      I    
Sbjct: 183 VENSKMGYYLRAIKGDEDAAQSLGMDTPAVKLHAFQLSAAIISVAGMVYGCYMGYIEPQT 242

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           M     +I + ++VI+GG+ S+        I+I  +E                       
Sbjct: 243 MCGLDLSIKIGAVVIIGGVGSVWGPILGAFIVIPAIEFASAFMGNVGGVGGT-------- 294

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
                 + L +V+++R   ++ L
Sbjct: 295 -QLFYGLILIIVVILRPEGMISL 316


>gi|240144009|ref|ZP_04742610.1| high-affinity branched-chain amino acid transport protein
           [Roseburia intestinalis L1-82]
 gi|257204045|gb|EEV02330.1| high-affinity branched-chain amino acid transport protein
           [Roseburia intestinalis L1-82]
          Length = 358

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 72/330 (21%), Positives = 133/330 (40%), Gaps = 24/330 (7%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + +V  L++ + + A      +  + + +  Y + A GL++ VG LG LS+     
Sbjct: 18  ITFAMVIVAYLIVQILIAAGVLSSLMQGLLVPMCTYSIVAIGLNLCVGYLGELSIGHAGF 77

Query: 74  YAIGAYSYVILGSRYGLSIW-------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
             +GA+S           I        +++ +   ++   G ++G+P L+ RGDYLAI T
Sbjct: 78  MCVGAFSSAFATKLLQNVIPNQILLFIIVLIIGTAVAAFFGFLIGIPVLRLRGDYLAIVT 137

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI +N++       +     +       +  +               I  +  +  
Sbjct: 138 LAFGEIIKNVINVLYIAKDTDGFHFAISNGNAIKLSDEGEWLINGAKGIAKIPHLSSFTA 197

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            + M  +   I+  L  +    A   IRDN+ A  S+   I   KL AF +S+A  G  G
Sbjct: 198 GVIMILICLFIVYHLVNSRSGRAIMAIRDNRIAAESVGINITKFKLMAFTISAAIAGAGG 257

Query: 247 AFFAASRDRISPD--MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
             +A +   ++     F ++ +I+++  V+LGGM S      A  IL  + E+  G++ Y
Sbjct: 258 VLYAHNLSTVTATPANFGYNMSIMILVFVVLGGMGSFRGSIIAAVILTLLPEVLRGLSDY 317

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
                             +  I L  ++L 
Sbjct: 318 ---------------RMLIYSIVLIAMMLF 332


>gi|291557911|emb|CBL35028.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           (TC 3.A.1.4.-) [Eubacterium siraeum V10Sc8a]
          Length = 358

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 68/335 (20%), Positives = 135/335 (40%), Gaps = 23/335 (6%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
              K      ++  +  +++ +          ID + + + +Y + A  L++ VG LG L
Sbjct: 4   PQTKKSFTTYIMVTLAFVIMMILSSTGNVSSQIDGLLVPLCVYSILAVSLNLTVGILGEL 63

Query: 67  SLNCVIAYAIGAYSYVILGSRY-------GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           SL       +GAY+  +             +   L I V  + +   G+++G+P L+  G
Sbjct: 64  SLGQAGFMCVGAYASALFSIATKETILVEWVRFPLAILVGGIFAAIFGILIGIPVLRLNG 123

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           DYLAI TL   EI +N+      +     G+++A     +                  + 
Sbjct: 124 DYLAIVTLAFGEIIKNVFAAL-YVGIDSKGLHIALNQADMNLEADGTEIIRGALGVKGVP 182

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
               + V   +  ++  I      +    A + IRDN  A  S+   I   KL  FA+++
Sbjct: 183 NDSSFVVGFILLLITLIISYSYINSRTGRAVKAIRDNSIAAESVGLNITKYKLITFALTA 242

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
              G+AGA ++ +   +    F ++ +I+++  V+LGG+ ++     A  +L  + EL  
Sbjct: 243 FLAGIAGALYSHNYATLQASKFDYNLSILILVFVVLGGIGNIRGSVIAAVVLTLIPELLR 302

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
            +N Y                  +  I L +++++
Sbjct: 303 SINSY---------------RMLIYSIVLIVMMIL 322


>gi|254788033|ref|YP_003075462.1| urea ABC transporter permease UrtB [Teredinibacter turnerae T7901]
 gi|237684047|gb|ACR11311.1| urea ABC transporter, permease protein UrtB [Teredinibacter
           turnerae T7901]
          Length = 563

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 47/319 (14%), Positives = 99/319 (31%), Gaps = 22/319 (6%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           L   K  + +        + ++ A GL+I  G +G++++       +GAY+   +   + 
Sbjct: 266 LSFFKFSENLLFGLSLGSVLLLAAIGLAITFGVMGVINMAHGEMIMLGAYTTFAIQQLFP 325

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
             I + + ++   +       G+   +    +L    L       + L+    I+     
Sbjct: 326 SLIDISLFLAIPAAFLVSGSAGVLIERLVIRHLYGRPL-------DTLLATFGISLILQQ 378

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                R   +       +      +  +   +   Y+LL   F+   + L LR+T +   
Sbjct: 379 AVRTYRANNVPVVTPDWMSGSWLINGAMSVTLNRVYILLFALFVLFMLALLLRKTLVGLQ 438

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R +  N+    S+     +     F + S   G+AG   A S+          S  I  
Sbjct: 439 MRAVTQNRAMATSMGIRSNWVDALTFGLGSGIAGIAGV--ALSQITNVGPNLGQSYIIDS 496

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             +V+ GG+ +L         L  V +    +       ++                   
Sbjct: 497 FMVVVFGGVGNLLGTFVGAMSLGVVNKFLEPVTGAVIGKIIVLIFIILFIQ--------- 547

Query: 330 LVILMRSHSLLRLRTPSNF 348
                R   L  L+     
Sbjct: 548 ----WRPRGLFALKGRFVE 562


>gi|295680691|ref|YP_003609265.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295440586|gb|ADG19754.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 607

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 79/322 (24%), Positives = 129/322 (40%), Gaps = 29/322 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V  + L   L       Y+        IY + A  L++V G++G +SL       IGAY
Sbjct: 313 IVALVALAFVLPLVVPSSYVLQTLTNGWIYGLLALSLTLVAGTVGQISLGHAALLLIGAY 372

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  +L    G S  L IP++ +I+ A G ++  PS + RG Y++IATL + EI   +++ 
Sbjct: 373 ASALLSVNLGWSPALTIPLAGLITAAIGTVLIYPSFRLRGHYVSIATLGIGEIIGLVVLN 432

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W  +T G  GI     L   G  +  +                +Y+  L +  L A +  
Sbjct: 433 WDSLTRGPVGITGIVPLSLFGWQLTGVR--------------AVYWFTLAVLVLLALLQA 478

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  + +   WR IR++  A  +        K  AFA      G+ G   A     I+  
Sbjct: 479 RLLHSHLGRTWRAIREDDVAARAYGIRPNRYKAIAFACGGLAAGIGGGIAAHLYSYINYQ 538

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F    +I+ +++VILGG+ S+         LI + EL      Y               
Sbjct: 539 TFDSQVSILALTMVILGGLGSVIGAVAGAVALISLPELFRFAADY--------------- 583

Query: 320 HTTLMVIALFLVILMRSHSLLR 341
              +  + L L++  R   L  
Sbjct: 584 RMLIYGMILLLLVRFRPQGLFG 605



 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 101/309 (32%), Gaps = 25/309 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  I   IY + A GL+++ G   L++      Y +G +   +  +R GL + + +
Sbjct: 6   DYTINGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGGFIGWLCLTRLGLPLPVAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +       G+++    L+       IA L+ +     +L +   I  G          
Sbjct: 66  LATVAGCALLGILIERIGLRPLQGAARIAPLLATIGISFVLDQLAQIVFGPDPRP----- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 V S +  +               +       +  + L+LR T +  A R    +
Sbjct: 121 ------VPSSLPDWTLSIGGATIGSLDLLIAAIGIGAAGVLYLFLRFTRLGWAVRATAQD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +     + FA++    G++G       + I P M  F   +  +  +++G
Sbjct: 175 RDAAQQMGVNVNAVNQAVFAIACGLGGLSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++      + +L  V      +                        + L   ++ R 
Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFG-------------TSYRDLFAFVLLLAFLVWRP 280

Query: 337 HSLLRLRTP 345
           + L      
Sbjct: 281 NGLFSANRR 289


>gi|302550719|ref|ZP_07303061.1| branched-chain amino acid ABC transporter permease [Streptomyces
           viridochromogenes DSM 40736]
 gi|302468337|gb|EFL31430.1| branched-chain amino acid ABC transporter permease [Streptomyces
           viridochromogenes DSM 40736]
          Length = 603

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 77/361 (21%), Positives = 144/361 (39%), Gaps = 32/361 (8%)

Query: 8   LNKYDKILCL---LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
           L+++ ++L       +       +    T++  +  ++G+ ILI+   A GL+IVVG  G
Sbjct: 235 LDRFSQLLAANRSFTLAMGFAAAIAFPFTQTDDHYANIGVNILIFGTVALGLNIVVGLAG 294

Query: 65  LLSLNCVIAYAIGAYSYVILG-------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           LL L  V    +GAY+  ++        S   L  W      A  S   G+++G P+L+ 
Sbjct: 295 LLDLGYVAFLGVGAYTAALVSGSEFSTISGVHLPFWASALAGAAASLVFGVLIGAPTLRL 354

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITN--GKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
           RGDYLAI TL   EIF+  +      +      G      +  L     +  +       
Sbjct: 355 RGDYLAIVTLGFGEIFRIAVNNMDGDSGPDVTNGPNGIPSIPDLNLFGFNFGQAHDIGGF 414

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
            +      Y +++ +  +   +      + I  +W  IR+++ A  ++       KL AF
Sbjct: 415 TLGRFANYYLLMVLIMAIVVLVYTRASDSRIGRSWIAIREDETAATAMGINGFRVKLIAF 474

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFS-----ENIIVISIVILGGMTSLSKIAKATAI 290
           A+ +A  G+AG   A     + P  ++F+      +  +++ V+LGGM +++      A+
Sbjct: 475 ALGAALAGLAGTVSAHVTYSVVPTPYQFAGSTPPNSAFLLAAVVLGGMGTVAGPLLGAAL 534

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           L  + E    +                 +      IAL L++  R   ++  R       
Sbjct: 535 LYLLPEKLVFLQD---------------KSLLAFGIALILLMRFRPEGIIANRRRQLEFH 579

Query: 351 R 351
            
Sbjct: 580 E 580


>gi|220916872|ref|YP_002492176.1| ABC transporter related [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219954726|gb|ACL65110.1| ABC transporter related [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 652

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 62/308 (20%), Positives = 119/308 (38%), Gaps = 16/308 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              +L   A V    L   +       Y   +   + IY +   GL + VG LG ++L  
Sbjct: 3   RRLLLVRGAEVVLFALLAAVPLAVHNPYALGLLTLLAIYGILLIGLDVTVGYLGQVNLAH 62

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +GAY+  I  ++ GL +  ++ ++  ++   G ++ LPSL+  G   A+ATL   
Sbjct: 63  AAFLGLGAYTAGIAVTKLGLGLVPVLLLAPTVAFVIGALLALPSLRLEGPQFALATLSFL 122

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +    L + + +T G  G+ +                         +     Y++ + +
Sbjct: 123 ALTTTALNELEWLTAGAQGLSLDRPP----------------LLGHDLSPRDFYWLCMVL 166

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                  +  L  +    A+  +RD+  A  ++       K++AFA  S   G+AGA +A
Sbjct: 167 LAAVWWAMRNLLSSQWGRAFEALRDSPIATDAMGVGTYRHKVAAFAFGSGLGGLAGALYA 226

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            + + + P  F +   I ++  V+LGG  SL        ++  +  L      +   S L
Sbjct: 227 FNFEYLQPQSFVYELTITLLLGVVLGGRKSLWGAFVGATLVALLPNLLSNRVLFQVFSGL 286

Query: 311 KFDCSFNM 318
               +   
Sbjct: 287 GLAVALVA 294


>gi|320449660|ref|YP_004201756.1| branched-chain amino acid ABC transporter permease [Thermus
           scotoductus SA-01]
 gi|320149829|gb|ADW21207.1| branched-chain amino acid ABC transporter, permease protein
           [Thermus scotoductus SA-01]
          Length = 355

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 126/310 (40%), Gaps = 16/310 (5%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                +    +   IL+Y +   GL+I  G  GL+++       +GAY+  +L  +    
Sbjct: 42  PQFLSRTQVFILDLILVYSIAVLGLNITTGYAGLINIGQAAFMGVGAYTAALLAPQGLP- 100

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            WL++P+  +++   G ++G+PSL+ +  YLA+ATL    +F+  +     +  G A   
Sbjct: 101 FWLVVPLGGLVAAFFGFLVGIPSLRVKHLYLALATLAFQVVFEWTVGHMPLLKQGGAMDM 160

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                       R+   F+             YYV L +  L A     L RT    A  
Sbjct: 161 PRASFLGYEAGFRNHFHFW-------------YYVSLVVLVLLAVFFRNLLRTRYGRALM 207

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +RDN +A  ++       KL AFA+ + + G+AG  +A     +  + + F+ +I +++
Sbjct: 208 AVRDNDRAADAMGMDPGRTKLFAFALGAFYAGVAGVLYAYLSRAVVIEDYTFAVSIKLLA 267

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYY--FNSLLKFDCSFNMRHTTLMVIALF 329
           + I+GG+ +L       A L  +      ++         +      +        + + 
Sbjct: 268 MAIVGGLGTLVGSFLGPAFLELLDVNMEALSNLIKALGFSMAGVDVASALRPLAFGLIIV 327

Query: 330 LVILMRSHSL 339
           L ++     L
Sbjct: 328 LFLMFEPRGL 337


>gi|225159233|ref|ZP_03725535.1| UreA ABC transporter, permease protein UrtB [Opitutaceae bacterium
           TAV2]
 gi|224802180|gb|EEG20450.1| UreA ABC transporter, permease protein UrtB [Opitutaceae bacterium
           TAV2]
          Length = 591

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 97/306 (31%), Gaps = 17/306 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAM 101
                + ++ A GL+I  G +G++++       +GAY+  +  + +           +  
Sbjct: 301 LSLSSVLLVTALGLAITYGLMGIINMAHGEIMVVGAYATYVTQNLFSGWFGADSAGYNYY 360

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
              A        +L       +I   +     +++L  W      + G         +  
Sbjct: 361 FLAALPAAFLAAALVGLVLERSIIQWLYRRPLESLLATWGVSLALQQGFRTIFGPANVQI 420

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
              + +R      + + +     +V+     + A   L + RT      R +  N+    
Sbjct: 421 NSPAWLRGN-IEFADITFTYNRIFVIAFAVVVVAGAWLLINRTRFGLYIRAVTQNRAMAS 479

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
            +        +  FA  S   G+AGA  A   +         S  +    +V+ GG+ SL
Sbjct: 480 CMGVRTERVNMLTFAFGSGLAGLAGACLAQIGNV--GPGLGQSHIVDCFMVVVSGGVGSL 537

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +    A   +  + ++                         L+++A+ L +  +   L  
Sbjct: 538 AGTVYAALGIGSIDQILQPFLGAVMGK-------------ILVLVAIILFLQWKPGGLFP 584

Query: 342 LRTPSN 347
            R  S 
Sbjct: 585 TRNRSL 590


>gi|116252589|ref|YP_768427.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115257237|emb|CAK08332.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 337

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 72/323 (22%), Positives = 131/323 (40%), Gaps = 19/323 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++   +  L L       Y+  +    LIY + A GL++ +G  G +SL      A+GA
Sbjct: 9   LLIAVGIALLALAPIGHGNYVALILCSWLIYTIAAMGLNLTLGYAGQISLAQASFMAVGA 68

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y   ++       + + +PVS       G+++G P+L+ +G +LA  TL  + +   +L 
Sbjct: 69  YITALMTMNGIHWL-IAMPVSVAACFVIGLLVGFPALRVKGHFLAFVTLAFNTLLVLVLR 127

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +T G  G     R       V          S  +     MYY+ L +  + A ++
Sbjct: 128 NEDWLTGGSYGKSNMPRP---DFWVFDTGMKSTVLSIPLTSNQKMYYLCLVVFVIFALLM 184

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+    A++ +R+N     SL   I    L AFA+ SA  G+AG+  +     I P
Sbjct: 185 YGLVRSPWGRAFKGLRENPIRAESLGLDIRRITLLAFAIGSAAGGLAGSLVSPVVQYIEP 244

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F  S ++ ++ +V++GG           A++I + E       YY             
Sbjct: 245 NSFALSFSLKILLMVVVGGSGYFFGPMLGAAVVILLPEFLRFTEGYY------------- 291

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
               +    + L+++     L+ 
Sbjct: 292 --LIIYSALVILLMVFSPSGLMG 312


>gi|39934306|ref|NP_946582.1| ABC transporter permease [Rhodopseudomonas palustris CGA009]
 gi|39648154|emb|CAE26674.1| possible ABC transporter, permease protein [Rhodopseudomonas
           palustris CGA009]
          Length = 381

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 78/306 (25%), Positives = 135/306 (44%), Gaps = 17/306 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
                  L+  L +     + Y  S  + +LIY +    ++++ G  G +S+      AI
Sbjct: 21  AAFWYAVLVAALIVAPYVLESYYLSQLVFVLIYAIVGIAMNVLSGQAGQVSIGHAAFMAI 80

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAYS  +   +YGL + + + ++   +G  G ++GLP+L+  G YLAIATL  + I + I
Sbjct: 81  GAYSAAV-AEKYGLPLPVYLVLAGGFTGLIGYLVGLPALRLHGIYLAIATLAFAFIVEEI 139

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           + +W+ +TNG  G+ +                         +     YY+ LG+  +   
Sbjct: 140 VTRWESVTNGNEGLMLGAPS----------------LFGLKLGAQGFYYLCLGVTVVVIL 183

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
             + + R+    A+  IRD++ A  S+       K  AFA+S+AF G+AG  +A     I
Sbjct: 184 AAINILRSPTGRAFLAIRDSETAARSMGIDTARYKTRAFAISAAFTGLAGVLYAHKLSFI 243

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP+MF  S +I  + I+I+GG+ SL         +I V  +   +        L      
Sbjct: 244 SPEMFSLSMSIEFVMIIIIGGVLSLRGAVFGAIFMIMVDPILIVVKDKVPQLTLGAMQGV 303

Query: 317 NMRHTT 322
            +    
Sbjct: 304 GLSDQL 309


>gi|149913165|ref|ZP_01901699.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. AzwK-3b]
 gi|149813571|gb|EDM73397.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. AzwK-3b]
          Length = 358

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 80/344 (23%), Positives = 138/344 (40%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ ++    L L+A       F  +    +  +++++ +  LIY + A GL+I+VG  
Sbjct: 20  FPIKFDRMRYYLVLIA------AFAVVPFVINDYWVNAVFLPFLIYSIAAIGLNILVGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++     +SI + I +S  ++    ++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKLMTGFPEVSILIHIILSGGVTAGVCLLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N  A   +                     +        
Sbjct: 134 AVATLAAQFFLVWMFNRVSWFYNYSASGQITAPETQ---------VLGVAVTGPQTEPWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L  C   A +   L R      W  IRD   A   +    + AKLSAFA+S  F+
Sbjct: 185 AYLFCLVFCVACALLARNLTRGMAGRKWMAIRDMDIAAEIIGVNPLKAKLSAFAISGFFV 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G+AGA F A         + F   ++ +V+ +VI+GG+ S+       A L+ +  L   
Sbjct: 245 GIAGALFFAVYLGAVEVGEAFGIQKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVLLKN 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                   L             ++   + L ++   H L +L  
Sbjct: 305 ---TLVGGLGWPTDLAAHLEFMIVGGLIVLFLIAEPHGLAQLWR 345


>gi|227820404|ref|YP_002824375.1| urea or short-chain amide ABC transporter permease [Sinorhizobium
           fredii NGR234]
 gi|227339403|gb|ACP23622.1| probable urea or short-chain amide ABC transporter, permease
           protein [Sinorhizobium fredii NGR234]
          Length = 543

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 94/297 (31%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++      S   L   S  I+     ++ 
Sbjct: 264 AAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQEVVRDSYPALFDWSLAIALPLAFLVT 323

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       +   +     + +L  W      +  +              S      
Sbjct: 324 GAVGLAMER--GVIRFLYGRPLETLLATWGISLILQQSVRSIFGPTNREVGNPSW-MSGA 380

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       +++L    + A+++  L++T +    R +  N++   S+     +  
Sbjct: 381 FELGGLTVTWNRLWIVLFALAVFAALLFLLKKTPMGLQMRAVTQNRRMASSMGIRTPWVD 440

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              FA+ S   GMAG   A S+             I    +V+ GG+ +L         L
Sbjct: 441 ALTFALGSGIAGMAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLVGAFSL 498

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             + +                          L+++ + L I  R   L  L+  +  
Sbjct: 499 GILNKFLEPYAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 542


>gi|90423173|ref|YP_531543.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90105187|gb|ABD87224.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 326

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 68/327 (20%), Positives = 131/327 (40%), Gaps = 24/327 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           LL       +   +       Y+ ++ +  L+Y   +   +I+ G  G +SL   + + +
Sbjct: 13  LLLAAGFTAVAALVPLFVKDVYVQNIMVLTLMYAALSQSWNILGGYCGQISLGHALYFGL 72

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +L +++G+  W  +    +IS    M +G P  + RG Y  IAT++++EI   +
Sbjct: 73  GAYTTALLFTKFGVLPWFGMISGGLISAVIAMALGYPCFRLRGHYFVIATIVIAEIAYLL 132

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            + W              +  +                     ++  +Y  LG C ++  
Sbjct: 133 FLNWDWAGAALGIDIPVRKDSWTTFQFTR-------------SKLPYFYFALGFCVVAWL 179

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +  WL+ +     WR ++DN  A  SL   +  +K+ A AVS+    + G+F+A     I
Sbjct: 180 VTFWLQDSKWGYWWRAVKDNPDAAESLGVVVFNSKMGAAAVSAFLTAVGGSFYAQFVSYI 239

Query: 257 SPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            P+    F  ++++    +LGG+ +L        ILI + EL           +      
Sbjct: 240 DPESVMSFHFSLLMALPAVLGGIGTLWGPVLGAVILIPLTELTRSFIGGSGRGV------ 293

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                  +    + L+ L R   L+ L
Sbjct: 294 ----DLIVYGTLIVLIALARPEGLIGL 316


>gi|255523333|ref|ZP_05390303.1| inner-membrane translocator [Clostridium carboxidivorans P7]
 gi|255512987|gb|EET89257.1| inner-membrane translocator [Clostridium carboxidivorans P7]
          Length = 303

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 79/309 (25%), Positives = 140/309 (45%), Gaps = 31/309 (10%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y  ++ +   IYV+   GL++  G  G +SL     YAIGAY+  IL  ++G SIW
Sbjct: 6   IFNSYFINILVVAGIYVILTLGLNLTTGFAGQVSLGHAAFYAIGAYTAAILSVKFGCSIW 65

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + +P+SA+++   G I+GLPSL+ + D+LA+ T+ +  I Q++++    IT G  GI   
Sbjct: 66  ITLPISALVTWIIGAILGLPSLRVKEDFLAVVTMGLGLIIQSLMLNL-KITGGPMGIGNI 124

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             +  LG                       + + L +  +    +  +  +    A   I
Sbjct: 125 KPVSILGHNFSMFN---------------FFILELVIIVILTFTMNRMVNSRFGRALIAI 169

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R+++    +L       K+ AFA+ + + G+AG  FA     +SPD F F+E+ I++S+V
Sbjct: 170 REDETVADTLGINTTKYKVLAFAIGAMYAGIAGTLFAHYFTYVSPDSFGFTESSIILSMV 229

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ++GG+ S+        IL    EL  G+  Y                  +  + + +++ 
Sbjct: 230 VIGGLGSIKGSIIGAVILSIAPELLRGLKDY---------------RILIYGLLMVIMMR 274

Query: 334 MRSHSLLRL 342
            R   L   
Sbjct: 275 YRPQGLFGE 283


>gi|312141342|ref|YP_004008678.1| branched-chain amino acid ABC transporter transmembrane protein
           [Rhodococcus equi 103S]
 gi|325673818|ref|ZP_08153508.1| amino acid ABC superfamily ATP binding cassette transporter, ABC
           protein [Rhodococcus equi ATCC 33707]
 gi|311890681|emb|CBH50000.1| putative branched-chain amino acid ABC transporter integral
           membrane subunit [Rhodococcus equi 103S]
 gi|325555083|gb|EGD24755.1| amino acid ABC superfamily ATP binding cassette transporter, ABC
           protein [Rhodococcus equi ATCC 33707]
          Length = 607

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 65/296 (21%), Positives = 117/296 (39%), Gaps = 17/296 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           + A+V+   +F F                  I  +   GL++ +G  G L+L     YA 
Sbjct: 14  IFALVFGAAVF-FAPMLGMDATNTRQLQLACILALVVSGLNLSLGYAGELALGQAAMYAA 72

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +L       I L +  +  ++   G+I G+P L+     LA+ +  +  +  +I
Sbjct: 73  GAYTAGLLSQAGHTEILLQLVAAGAVALLVGIITGIPGLRLGSWSLAMTSFFLILLVPDI 132

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           L  +   T G+ G+   +     G  +                    YY+++G+  L   
Sbjct: 133 LAIFGGNTGGRNGLSGMEPPTLFGQDIDKD----------------FYYLVVGVTILWFV 176

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++  L  +    A+RT++ +     S   ++   KL  +A+ +   G+AGA FA +   I
Sbjct: 177 VMRNLVVSRHGIAFRTLKQSPVLAQSQGVSVYRMKLLGYAIGALPAGLAGALFANTDLFI 236

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           SP+ F F+    V++  ILGG  S+       AI+            Y       F
Sbjct: 237 SPEAFGFTFATAVLAASILGGSASVYGAVIGAAIMQFGPNQSTAFQEYSLLFYGGF 292


>gi|163854247|ref|YP_001642290.1| ABC transporter related [Methylobacterium extorquens PA1]
 gi|163665852|gb|ABY33219.1| ABC transporter related [Methylobacterium extorquens PA1]
          Length = 823

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 71/333 (21%), Positives = 136/333 (40%), Gaps = 31/333 (9%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           +       +   +  L L        +  Y   +   + + V+   GL++++G  GL+S 
Sbjct: 3   SPLRAPAAMPLAILALTLAGLGLVAATSGYSHFVIALVALTVVAGTGLNVLLGLAGLISF 62

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                YA+GAY+  IL  +     WL +P +A +S   G  + +P+++ RG YLA+ T+ 
Sbjct: 63  GHAGFYALGAYASAILTLKGVS-FWLALPAAAGLSALVGAALAVPAMRVRGPYLAMVTIA 121

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
              + ++ LI+   +T G+ G+ VA      G  +                   + ++ +
Sbjct: 122 FGFLVEHALIEGGELTGGQNGLVVATGPSLFGLPLGERD---------------LAWLAV 166

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
               LS      LR   +  A R +RD   A  SL    +  K +AFA+S+A  G+AGA 
Sbjct: 167 IGAGLSLYGFHRLRHARLGQALRAVRDADVAAASLGYDPVRVKTAAFAISAALTGLAGAV 226

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                  I+P  F F+++I+ +  V++GG  ++        + + + E   G+  Y    
Sbjct: 227 LPPLMLFIAPSSFPFTQSILFVLAVVVGGAGTVLGPLFGALVTVLLPEALAGLAEY---- 282

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                            +   +V+ +    ++ 
Sbjct: 283 -----------RLLFFGLTTLVVLWLVPAGIVG 304


>gi|71908848|ref|YP_286435.1| inner-membrane translocator:ABC transporter related [Dechloromonas
           aromatica RCB]
 gi|71848469|gb|AAZ47965.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
           / amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Dechloromonas aromatica RCB]
          Length = 597

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 51/320 (15%), Positives = 110/320 (34%), Gaps = 22/320 (6%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
                F          Y  ++G  I +Y + A GL ++ G  GL S        +GAY+ 
Sbjct: 11  LMFGWFFLFPFLPVPGYWITIGNYIGLYSIVALGLVLLTGIGGLTSFGQAAFVGLGAYTT 70

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
             L +  G S W+ +    ++SG    ++G  +++  G +L +AT+        +    +
Sbjct: 71  AYLSTTLGWSPWIGLGAGLVVSGLAAGLIGSITVRLSGHFLPLATIAWGLSLYYLFGTLE 130

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +     G+     L   G  + S                 MY ++         ++L L
Sbjct: 131 FL-GKYDGLSGIPPLSLFGLDLSS--------------PRVMYGMIWFCLGGCLWLVLNL 175

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +    A R +   +    ++       K+  F +++    ++G  +A  +  +S   F
Sbjct: 176 LNSRPGRAIRALAKGKTMPEAMGINTAQYKILIFVLAALMASLSGWLYAHLQRSVSATPF 235

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             +  I  + + ++GG+  +        ++ G+             S   F         
Sbjct: 236 GLNMGIEYLFMAVVGGVGHVWGAILGAVVMTGLKSQLQDWLPLLLGSNGNF-------EI 288

Query: 322 TLMVIALFLVILMRSHSLLR 341
            +  + + L++L     L  
Sbjct: 289 VVFGVMIVLLLLWSRDGLWP 308


>gi|328950816|ref|YP_004368151.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451140|gb|AEB12041.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
          Length = 354

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 74/322 (22%), Positives = 138/322 (42%), Gaps = 17/322 (5%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           ++ L+  L +     ++   ++   I+IY +   GL+I  G  GL+++       +GAY+
Sbjct: 31  LWVLIAALLVLPRFLERSQMAVVDLIVIYAIAVLGLNITTGYAGLINIGQAAFMGVGAYT 90

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             ++     L  WL +PV  +++   G+I+G+PSL+ +  YLAIATL    IF+ I+   
Sbjct: 91  AALVA--PYLPFWLTLPVGGLVAAVAGVIVGIPSLRIKHLYLAIATLAFQLIFEWIV--- 145

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
                       +  L   G      + F  +   F  +  F YYV L +  L A     
Sbjct: 146 ----------GHSPALEQGGAIAMPRVTFLGYAVGFRNHHFFWYYVALVVLVLLAFAFRN 195

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L RT    A   +RDN +A  ++       KL AF + + + G+AGA FA     +  + 
Sbjct: 196 LLRTRYGRALVAVRDNDRAADAMGMDPGRTKLFAFGLGAFYAGVAGALFAYWSRAVVIED 255

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY--FNSLLKFDCSFNM 318
           +  S +I ++++ I+GG+ +        A L+ +      ++ +   F          + 
Sbjct: 256 YMLSTSIELLAMAIVGGLGTFVGSFLGPAFLVLLDINVETLSEWIKSFGITPAGIDVASG 315

Query: 319 RHTTLMVIALFLVILMRSHSLL 340
               +  + + L ++     L 
Sbjct: 316 LRPLVFGLVIVLFLIFEPRGLA 337


>gi|94986266|ref|YP_605630.1| inner-membrane translocator [Deinococcus geothermalis DSM 11300]
 gi|94556547|gb|ABF46461.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Deinococcus geothermalis DSM 11300]
          Length = 325

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 78/331 (23%), Positives = 135/331 (40%), Gaps = 28/331 (8%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            +   +L   L   K   Y+  + I  +I+ M A+GL++++G  GLLSL     + IGAY
Sbjct: 11  WLAVFVLAALLPLVKPGTYVLDLAINTMIWAMLAYGLNVMLGYTGLLSLAHAGFFGIGAY 70

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  IL  + G S WL  P + ++    G+++GL + + RGD  AI TL +  I Q ++ K
Sbjct: 71  AVGILTLKAGWSFWLAWPAAVLLCALGGLLLGLVAFRTRGDAFAIFTLGVGVIIQLVINK 130

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W  +T G  G+                     F           YY+ L    L+  ++ 
Sbjct: 131 WDALTGGNEGLNGVPPAS-------------SFLGLDFSKAANFYYIALAALILTVMVVA 177

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
             R +    +   IR  +    S    +   KL A  +S+A  G+AG  +AA    +   
Sbjct: 178 RTRGSVFGRSLVAIRGGEDLARSAGIDVYSHKLRAMMLSTAIAGLAGGVYAAYVGFLGSA 237

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +   +    V+  +++GG+ +L+     TA+L  + +   G+  Y               
Sbjct: 238 VTGPTTTFTVLLYLLVGGVGTLAGPLLGTALLYVLTQSLQGLQDY--------------- 282

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              +    L L++L     L+ L   S    
Sbjct: 283 RFLVFGPLLVLLVLFAPQGLVGLWDRSRLRR 313


>gi|197122104|ref|YP_002134055.1| ABC transporter [Anaeromyxobacter sp. K]
 gi|196171953|gb|ACG72926.1| ABC transporter-related protein [Anaeromyxobacter sp. K]
          Length = 652

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 63/308 (20%), Positives = 119/308 (38%), Gaps = 16/308 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              +L   A V    L   +       Y   +   + IY +   GL + VG LG ++L  
Sbjct: 3   RRLLLVRGAEVVLFALLAAVPLAVHNPYALGLLTLLAIYGILLIGLDVTVGYLGQVNLAH 62

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +GAY+  I  ++ GL +  ++ ++  I+   G ++ LPSL+  G   A+ATL   
Sbjct: 63  AAFLGLGAYTAGIAVTKLGLGLVPVLLLAPTIAFVIGALLALPSLRLEGPQFALATLSFL 122

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +    L + + +T G  G+ +                         +     Y++ + +
Sbjct: 123 ALTTTALNELEWLTAGAQGLSLDRPP----------------LLGHDLSPRDFYWLCMVL 166

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                  +  L  +    A+  +RD+  A  ++       K++AFA  S   G+AGA +A
Sbjct: 167 LAAVWWAMRNLLSSQWGRAFEALRDSPIATDAMGVGTYRHKVAAFAFGSGLGGLAGALYA 226

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            + + + P  F +   I ++  V+LGG  SL        ++  +  L      +   S L
Sbjct: 227 FNFEYLQPQSFVYELTITLLLGVVLGGRKSLWGAFVGATLVALLPNLLSNRVLFQVFSGL 286

Query: 311 KFDCSFNM 318
               +   
Sbjct: 287 GLAVALAA 294


>gi|260467380|ref|ZP_05813552.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259028840|gb|EEW30144.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 320

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 87/330 (26%), Positives = 151/330 (45%), Gaps = 30/330 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             ++      L    +    +  Y+  +    L+YV+   GL+IVVG  GLL L     +
Sbjct: 20  WSVVLPGLAALAVALVLPQFANAYVTEVATTALLYVVLCLGLNIVVGYAGLLDLGYAAFF 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GAY+  IL + +G + WL IPV+   +   G+I+G P+L+ R DYLAI TL   EI +
Sbjct: 80  AVGAYTSGILTAEFGFNFWLTIPVAMAAACVAGIIIGAPTLRLRSDYLAIVTLGFGEIVR 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I      IT G +G+   +R    G  +  +  F              YY  L +  L+
Sbjct: 140 IIARNL-DITGGASGLIGIERPEIFGFRLMQVQHF--------------YYAFLVLALLT 184

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A + L + R+ +  AW  +R ++ A   +    + AKL A+ + +    +AG  +AA   
Sbjct: 185 AFVCLSVERSRMGRAWFYVRYDEDAAAGIGINRVTAKLQAYMMGAVIASVAGCLYAAKMT 244

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ISP+ F F+++++++  V+LGGM  +  +     ++  + E+  G   Y          
Sbjct: 245 AISPESFTFNQSLLILLGVVLGGMGRIPGVVLGAILVALLPEVLRGAGTY---------- 294

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                   +  +AL  ++L R + L   + 
Sbjct: 295 -----RPLVTAVALLAIMLFRPNGLWPDKR 319


>gi|282857290|ref|ZP_06266528.1| inner-membrane translocator [Pyramidobacter piscolens W5455]
 gi|282584870|gb|EFB90200.1| inner-membrane translocator [Pyramidobacter piscolens W5455]
          Length = 370

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 54/350 (15%), Positives = 122/350 (34%), Gaps = 10/350 (2%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
           + I  L+ V   + +F+       +  + ++  +  +Y + A  ++++ G  G+ SL   
Sbjct: 11  NIISALIIVAIYVAVFVAEQCLPPRSMLFTVLKKGAVYALVAVSMNLLNGFTGIFSLGQA 70

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS- 130
               IGAY Y I          +       I            L      L    + +  
Sbjct: 71  GFMLIGAYVYCIFTIPIVSRPIVYQYFGGGIIQFTLPWFVAMFLAGLAAALFAWLIGLPV 130

Query: 131 -----EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                +      + +  I            +      +R    F  F        + +Y 
Sbjct: 131 LRLKSDYLAIATLGFAEIIRAIFQWNQLGPITNGSNMLRLFTIFTDFNIMNPDGTVSVYL 190

Query: 186 ---VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
              V + +     ++++ L  +    A R I+DN+ A  ++   +   K  AF +SS F 
Sbjct: 191 ATTVPMLIAGFCIALLVLLINSTYGRALRAIKDNEIAAEAMGINLASHKQLAFCISSFFT 250

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE-LCCGM 301
           G++GA  A  +  +    F  +    ++ IV++GG+ S++    ++ + +   E     +
Sbjct: 251 GISGAMLAMYQTSVQAKSFTSAMTYEILLIVVIGGVGSVTGSCLSSFLFVACSEWWLRFL 310

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +     +  +     N     +  I + +V+L     ++  +   +   R
Sbjct: 311 DEKQVVNGFEVPLLRNGFRLVVFSIIIMIVVLFFRRGIMGTKELPDLFRR 360


>gi|313112593|ref|ZP_07798252.1| amino acid or sugar ABC transport system, permease protein
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310625089|gb|EFQ08385.1| amino acid or sugar ABC transport system, permease protein
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 351

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 58/326 (17%), Positives = 123/326 (37%), Gaps = 24/326 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + +   + +F  +     + YI ++ +        +   +I+ G  G  SL       
Sbjct: 14  LAIVLAIIVAIFAAIPLVVDKPYIINIFVLTFYMSTLSMAWNILGGITGQNSLGLAAYMG 73

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY   ++ ++ G++ W+   +  ++ G    ++  PSL  RG Y  + ++  +E  + 
Sbjct: 74  LGAYVCCLVVTKTGMNPWVAAVLDMLVVGVVAGVIFFPSLILRGPYFTLVSIAFAESIRQ 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +I  +             +  F      S              ++  YY+   M     
Sbjct: 134 FIINSEFFGRASGVGLPFGKDSFAQFRFTS--------------KVPYYYIGFIMMVGVY 179

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I+  + R+ +  A RTIR+++ A  ++       K+ A  +S+   G+ G F+ +    
Sbjct: 180 LIMKKIGRSKLGFALRTIREDEDAAAAIGINPTKYKVIAVVISAIIAGLVGFFYVSYIRY 239

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           I PD+   S++  ++   ++GG   +        I+I + EL              F   
Sbjct: 240 IDPDIMIQSKSTEIVLPAVVGGAAYIEGPLIGGLIMIPLSELLRA----------NFAAI 289

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
               +  +  I L +VI  R   +L 
Sbjct: 290 LPGINMLMYAIVLIVVIRFRPSGILG 315


>gi|154246644|ref|YP_001417602.1| ABC transporter related [Xanthobacter autotrophicus Py2]
 gi|154160729|gb|ABS67945.1| ABC transporter related [Xanthobacter autotrophicus Py2]
          Length = 842

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/340 (15%), Positives = 110/340 (32%), Gaps = 34/340 (10%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L    +   ++L        +      +  QI IY ++  G+++++G  GL+     
Sbjct: 4   RAVLLHPVLWTAVVLGALSALWLALGAPIQLVTQIAIYALYGAGVNLLIGYTGLVPFGAS 63

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           + +   +Y+        G +    + +S + +   G+ +G   L+ +G Y ++ TL  S+
Sbjct: 64  VFFGCTSYAAAYFILGLGGNEIGALGLSMVFAAVLGLGIGAVILRRKGLYFSLLTLACSQ 123

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I   I  KW  +T G+ GI    R                         +  +  ++   
Sbjct: 124 IAFEIAFKWTSVTGGENGIQGVPRPLME-------------------SPLTFHVFVVATV 164

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                ++  L         + +RDN     SL   +   +L  F + +  +G AGA    
Sbjct: 165 VGVMWLLWRLAHAPFGRVLQAVRDNDVRAASLGYDVYRVRLVGFTLCAVVVGYAGALLTF 224

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               +  +   +      + + +LGG+             I +      +   ++     
Sbjct: 225 LLQGVYANNLGWQHAGDSLLMTVLGGVHHFLGPLWGAITFIVLENRLSAITENWW----- 279

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                      +    L    L+    +  L       ER
Sbjct: 280 ----------LIFAPLLIAFALVSPEGIQGLVQRLFRCER 309


>gi|218533210|ref|YP_002424026.1| ABC transporter [Methylobacterium chloromethanicum CM4]
 gi|218525513|gb|ACK86098.1| ABC transporter related [Methylobacterium chloromethanicum CM4]
          Length = 823

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 71/330 (21%), Positives = 135/330 (40%), Gaps = 31/330 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
                +   +  L L        +  Y   +   + + V+   GL++++G  GL+S    
Sbjct: 6   RAPAAMPLAILALTLAGLGLVAATSGYSHFVIALVALTVVAGTGLNVLLGLAGLISFGHA 65

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             YA+GAY+  IL  +     WL +P +A +S   G  + +P+++ RG YLA+ T+    
Sbjct: 66  GFYALGAYASAILTLKGVS-FWLALPAAAGLSALVGAALAVPAMRVRGPYLAMVTIAFGF 124

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           + ++ LI+   +T G+ G+ VA      G  +                   + ++ +   
Sbjct: 125 LIEHALIEGGELTGGQNGLVVATGPSLFGLPLGERD---------------LAWLAVISA 169

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            LS      LR   +  A R +RD   A  SL    +  K +AFA+S+A  G+AGA    
Sbjct: 170 GLSLYSFHRLRHARLGQALRAVRDADVAAASLGFDPVRVKTAAFAISAALTGLAGAVLPP 229

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               I+P  F F+++I+ +  V++GG  ++        + + + E   G+  Y       
Sbjct: 230 LMLFIAPSSFPFTQSILFVLAVVVGGAGTVLGPLFGALVTVLLPEALAGLAEY------- 282

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                         +   +V+ +    ++ 
Sbjct: 283 --------RLLFFGLNTLVVLWLVPAGIVG 304


>gi|119716377|ref|YP_923342.1| ABC transporter related [Nocardioides sp. JS614]
 gi|119537038|gb|ABL81655.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
           / amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Nocardioides sp. JS614]
          Length = 606

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 63/322 (19%), Positives = 117/322 (36%), Gaps = 29/322 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+  + +F  L A+    Y   +    ++Y +   G+ + +G  G LSL  V   A+GAY
Sbjct: 15  VLIAIAVFALLVASLGDSYRTGILSLAVVYGIALVGMHVQIGYAGELSLGAVAFMAVGAY 74

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +L + + ++    I VS +IS    +I+G   L+     LA+ TL M  I + ++  
Sbjct: 75  GSGVLTTEHDMNPLAAIGVSLLISLGAALIIGSLCLRISELTLALVTLFMVIIVEQLVSH 134

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                 G  GI   + L   G +  S  +                 +   +         
Sbjct: 135 LDAF-GGTFGISGIEPLEVFGYSFESRTQ--------------QAVLAGVVLLAVWLFAR 179

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           +  R         +  +     SL   +   +L  F   +    +AG+ FA +R  +SPD
Sbjct: 180 YRLRALTGLEVVALSHDATMAESLGVAVRRRRLEVFVFGALVACLAGSVFAHTRLYVSPD 239

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F       ++ ++ +GG+  L        IL  + ++   +  Y               
Sbjct: 240 QFGPGLIFELLLMMYIGGLRFLLGGFLGALILGFLPDIAISLQDYLL------------- 286

Query: 320 HTTLMVIALFLVILMRSHSLLR 341
                V+ L +  L+R   L+ 
Sbjct: 287 -IIEGVLFLAIFALVRDRGLIG 307


>gi|260425527|ref|ZP_05779507.1| extracellular ligand-binding receptor [Citreicella sp. SE45]
 gi|260423467|gb|EEX16717.1| extracellular ligand-binding receptor [Citreicella sp. SE45]
          Length = 695

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/317 (12%), Positives = 104/317 (32%), Gaps = 15/317 (4%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +      + + +     ++  + A GL+++ G +GL++L     Y +GA++         
Sbjct: 390 MSPILLAEQVLNGLQSGVMLFLMAAGLTLIFGVMGLINLAHGALYMVGAFAAAT------ 443

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
               +     + +      +          + L I  L   +    +L  +  I     G
Sbjct: 444 ----VAGLTGSFLLALVAALAAAAVAGALVETLVIRRLYARDHLDQVLATFALILIFSEG 499

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                  + L   V   +         + Y ++   +++    ++  +     RT +   
Sbjct: 500 TRWVFGSFPLYLDVPDALSGTVTLPGGIAYPLYRLALIVIGIAVALGLWWLNSRTRLGIR 559

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R   ++++    L   I       FA+ +   G+AGA   A +             I+ 
Sbjct: 560 IRAGENDREMIAVLGVDISKLYTLVFALGAGLAGLAGALVGAIQSV--QVGMGEPVLILA 617

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVI 326
             ++++GG+ S+        ++     L   +    F   +    +    +   +  + +
Sbjct: 618 FVVIVIGGIGSIRGALIGALLVGLTDTLGGVLLPELFRLFIDPASAATAGSAFASMAIYV 677

Query: 327 ALFLVILMRSHSLLRLR 343
            +  V++ R   L   R
Sbjct: 678 LMAAVLVWRPTGLFGGR 694


>gi|255505703|ref|ZP_05347656.3| high-affinity branched-chain amino acid transport protein
           [Bryantella formatexigens DSM 14469]
 gi|255266403|gb|EET59608.1| high-affinity branched-chain amino acid transport protein
           [Bryantella formatexigens DSM 14469]
          Length = 357

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 78/340 (22%), Positives = 147/340 (43%), Gaps = 28/340 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           + +K + I   + +V  +++          + I  + + + +Y + A  L++VVG  G L
Sbjct: 7   KTSKNNYITYAMVIVIFIVVQTLSATGNLSRLITGLLVPLCVYTIAAVSLNLVVGFSGEL 66

Query: 67  SLNCVIAYAIGAYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           SL       +GAYS  +  + +         + L I V A ++   G+++G+P L+ RGD
Sbjct: 67  SLGHAGFMCVGAYSSALFSNVFAETLPSVPRLILAILVGAAVAAVFGILIGIPVLRLRGD 126

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLAI TL   EI    LI    +   + G++VA     L                     
Sbjct: 127 YLAIVTLAFGEII-KNLINVLYVGVDENGLHVATSSAGLNLAAGGKQIMKGALGISGTAT 185

Query: 181 IF------MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
           ++       + + + +  ++  I+  L  +    A  + RDN+ A  S+  ++   KL A
Sbjct: 186 LYKDIKDYFFPIGVVLILITLFIVQNLVNSRSGRAIMSTRDNRIAAESVGISVTKYKLMA 245

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F +S+A  G+AG  +A +   +    F ++ +I+++  V+LGG+ +L     AT IL  +
Sbjct: 246 FTISAALAGVAGVLYAHNLSMLKVSTFDYNLSILILVYVVLGGIGNLRGSIIATIILYAL 305

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
            EL  G + Y                  +  + L +++L 
Sbjct: 306 PELLRGFSNY---------------RMLIYAVVLIVMMLF 330


>gi|295109215|emb|CBL23168.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           (TC 3.A.1.4.-) [Ruminococcus obeum A2-162]
          Length = 356

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 78/339 (23%), Positives = 141/339 (41%), Gaps = 27/339 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  K + I   + +   +++ +  G     + +  + + + +Y + A  L++VVG  G L
Sbjct: 7   KTTKNNFINYGIVIAIFVIVEILSGTGNLSRLLTGLLVPLCVYTIAAISLNLVVGFSGEL 66

Query: 67  SLNCVIAYAIGAYSYVILGS-----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           SL       +GAYS  +               L I + A+++   G+I+G+P L+ RGDY
Sbjct: 67  SLGHAGFMCVGAYSSALFSHIASDIPQVPRFILAILIGAVVAAVFGVIIGIPVLRLRGDY 126

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LAI TL   EI    LI    +   + G++VA     L                     +
Sbjct: 127 LAIVTLAFGEII-KNLINILYVGFDENGLHVATSSANLKLAAGGKQILKGALGISGTGAL 185

Query: 182 F------MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
           +       + + + +  L+  I+  L  +    A    RDN+ A  S+   +   KL AF
Sbjct: 186 YKDVKHYFFPIGIILVLLTLFIVQNLVNSRSGRAIMATRDNRIAAESVGIDVTKFKLLAF 245

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            +S+A  G+AG  +A +   +    F ++ +I+++  V+LGG+ +L     A  IL  + 
Sbjct: 246 TISAALAGVAGVLYAHNLSMLKVSGFDYNMSILILVYVVLGGIGNLRGSMIAAIILYALP 305

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           EL  G   Y                  +  I L +++L 
Sbjct: 306 ELLRGFANY---------------RMLIYAIVLIVMMLF 329


>gi|157737051|ref|YP_001489734.1| urea/short-chain amide ABC transporter, permease protein
           [Arcobacter butzleri RM4018]
 gi|157698905|gb|ABV67065.1| urea/short-chain amide ABC transporter, permease protein
           [Arcobacter butzleri RM4018]
          Length = 534

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 94/306 (30%), Gaps = 21/306 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
             Q  + ++ A GL+I  G + ++++       IGAY+   +       I   I ++   
Sbjct: 249 LSQGSVLLLAAIGLAITFGVMKVINMAHGELIMIGAYTTYTIQQLMPNLIEYSIIIAIPA 308

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     I+G+   +    +L    L      + +L  +      +  +            
Sbjct: 309 AFIVSAIVGILIERLVIRHLYGRPL------ETLLATFGISLILQQVVRTIFSPLNQEVK 362

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             S +      +S +       Y+++    +  +++  +++T++    R +  N+    +
Sbjct: 363 TPSWMSGALEINSALSLTYNRLYIVIFALVVFLAVLFVMKKTSLGLKVRAVSQNRPIARA 422

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +     +     F + S   G+AG   +   +         +  +    +V+ GG+ +L 
Sbjct: 423 MGIKSSYIDALTFGIGSGIAGVAGVALSQLTNV--GPNLGQAYIVDSFMVVVFGGVGNLW 480

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L  + +            ++                        +   L   
Sbjct: 481 GTLIAAFSLGEINKFIEPFAGAVLAKVIILVFIILFIQK-------------KPRGLFPQ 527

Query: 343 RTPSNF 348
           +     
Sbjct: 528 KGRDVE 533


>gi|120555910|ref|YP_960261.1| inner-membrane translocator [Marinobacter aquaeolei VT8]
 gi|120325759|gb|ABM20074.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Marinobacter aquaeolei VT8]
          Length = 534

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 100/306 (32%), Gaps = 21/306 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+ A GL+I  G +G++++       +GAY+   +   +     L + +S   
Sbjct: 249 LSLGSVLVLAAIGLAITFGVMGVINMAHGELIMLGAYTTWGMQQLFPGQPGLALILSIPA 308

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 + G+   +    YL    L      + +L  +      +  +            
Sbjct: 309 GFLVAALAGIAIERSVIQYLKGRPL------ETLLATFGISLILQQLVRTVISPLNRTVV 362

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +      +  +   +   YV+     + A ++L +R+T +    R +  N+    S
Sbjct: 363 TPEWMSGSIMVNEALSLTLNRLYVIGFALVVFAGLMLIMRKTRLGLEVRAVTQNRAMARS 422

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +        +  FA+ S   G+AG   A S+          +  I    +V+ GG+ +L 
Sbjct: 423 MGIKATKVDIMTFALGSGVAGLAGV--ALSQITNVGPNLGQNYIIDSFMVVVFGGVGNLW 480

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L  + +L                         ++++ + L I  R   L   
Sbjct: 481 GTLIAGLSLGTINQLLEPWAGAVLAK-------------IMVLVLIILFIQKRPRGLFPQ 527

Query: 343 RTPSNF 348
           +  +  
Sbjct: 528 KGRAAE 533


>gi|121535943|ref|ZP_01667738.1| inner-membrane translocator [Thermosinus carboxydivorans Nor1]
 gi|121305471|gb|EAX46418.1| inner-membrane translocator [Thermosinus carboxydivorans Nor1]
          Length = 342

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 63/326 (19%), Positives = 123/326 (37%), Gaps = 18/326 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++ ++  L  F+         Y   +    L Y +    L+ V G +G  SL     + 
Sbjct: 28  AVILLITFLDSFIDAPDYIFSPYFKHIIFVSLTYSIVTLSLNFVSGYVGQTSLGHAAFFG 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +G Y   +L   Y +  W     + +++   G+ +G P+L+ +G +L + T    E+F+ 
Sbjct: 88  LGGYVSALLTQLYHVPYWPAFLAAGVVAALVGIPLGAPALRVKGPFLVVVTYACGEVFRF 147

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I +  +                 L   V   I    F       +       L      A
Sbjct: 148 IALNLEVTGG----------PAGLPGLVTPSIAGVSFTDVGATGKELFIVTALVFALALA 197

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L  + I +A+  IR+++ A  ++     + KL AF + + F G+AG+ F      
Sbjct: 198 FFMSRLEDSRIGHAFAAIREDEIAAAAMGINTAYYKLLAFCLGAFFAGLAGSLFVHYLSF 257

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +SPDM   +E+I++ ++V++GG  S+        +L  + E               F   
Sbjct: 258 VSPDMLSSTESIMMFTMVVVGGARSIPGSFLGAFLLTFIPEGLRYFKD--------FVHL 309

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                       L +++ +R   +L 
Sbjct: 310 PFDPWLVFFGFVLMVMMRVRPQGILG 335


>gi|86139335|ref|ZP_01057904.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85823838|gb|EAQ44044.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 358

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 80/344 (23%), Positives = 144/344 (41%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ ++Y   L L      L+ FL +  T +  +  ++ +  LIY + A GL+I+VG  
Sbjct: 20  FPIKFDRYRYYLVL------LIAFLVIPFTINDYWASAILLPFLIYSIAAIGLNILVGYA 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +   +S+++ + ++  I+    ++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKLMTAFPEVSMFVHVMLAGGITALVCVLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N                       F    +        
Sbjct: 134 AVATLAAQFFLVWVFNRVPWFYNYS---------ASGQINAPERDVFGIVITGPNAPAWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L    + A I   L R  +  +W  IRD   A   +    + AKL+AFAVS  FI
Sbjct: 185 TYLFCLIFLTICAVIARNLTRGTVGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVSGFFI 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F A         + F  +++  V+ +VI+GG+ S+       A L+ +  +   
Sbjct: 245 GISGALFFALYLGAVEVGEAFGITKSFQVLFMVIIGGLGSIFGSFAGAAFLVLLPVILKV 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +              F      ++   + L +++  H L +L  
Sbjct: 305 VGVDVLGWPTDIVAHF---QLVIVGALIVLFLIVEPHGLAQLWR 345


>gi|144898610|emb|CAM75474.1| inner-membrane translocator [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 318

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 56/323 (17%), Positives = 113/323 (34%), Gaps = 30/323 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++    +   L       Y   + I   +  +   GL++++G  G +SL     + +GAY
Sbjct: 15  LIVLAAVIAVLPLALRNDYHYDVVINAGLNAIVVVGLNLLIGYAGQISLGHAAFFGLGAY 74

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              IL + YG      +     + G    ++  P L+ +G YLA+ATL +  I   +L  
Sbjct: 75  VSAILTTTYGWPALGAMAAGIAVVGILAYVIARPILRLKGHYLAMATLGIGVIISIVLNT 134

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +T G  G+  A       T                      Y+++ G   L+  +  
Sbjct: 135 EAQVTGGPDGMSAAPFTVLGYTFASEQSW---------------YWLVGGALLLTVWLST 179

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  + I  A R +   +     +       K+  F +S+ F   AG+ FA     ++P 
Sbjct: 180 NLIDSPIGRALRALHGAEIGARVVGIDTTRYKVLIFVISAMFASFAGSLFAHHTPTVTPS 239

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  F +++  + + + GGM S+        I+  +         +               
Sbjct: 240 ILGFIKSVEFVVMAVFGGMASVMGSVVGAVIMTLLPNALAAFEDF--------------- 284

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
              ++   +   ++     L+  
Sbjct: 285 EPIILGGIMMGTMIFMPKGLVPT 307


>gi|284045419|ref|YP_003395759.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283949640|gb|ADB52384.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 322

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 67/323 (20%), Positives = 135/323 (41%), Gaps = 7/323 (2%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
             +   A  + ++  S+G+   IY + A GL + VG  G+L+       AIGAY+  IL 
Sbjct: 5   FAVTFDAFANIEFWTSVGVLAGIYAIVALGLQLNVGFTGILNFGQAGFMAIGAYAMAILV 64

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           + + +S WL +P++ + + A  +++GL SL+ R DY AI T+  +E  + +    + +T 
Sbjct: 65  ADHDMSFWLALPIAVLATVAFALLVGLSSLRLRADYFAIVTIAAAEAVRLVASNARDLTG 124

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G  G        +   +            + V     ++ V   +  +    +  L++T 
Sbjct: 125 GAQG-IGGFSADWDALSRSIEDFIVSLGWTDVPGLFPLFLVTWALVIVLTIGLTQLQKTP 183

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
                R +R+++ A  +L       KL + A+S+    +AG   A +   + PD F+ + 
Sbjct: 184 WGRVLRAVREDEDAARALGKNAFAYKLQSLALSATIGAIAGFLVALNLKFVVPDAFQPTL 243

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
             +  +I++LGG+ +    A    +L  V+E    +      +              ++ 
Sbjct: 244 TFLGFAILVLGGLANYYGAAVGAVLLFTVLEGLRFVELPITET------QVAALRFIVLG 297

Query: 326 IALFLVILMRSHSLLRLRTPSNF 348
           + L  ++  R   L   +     
Sbjct: 298 LLLIGLMAFRPQGLFGNKREMMI 320


>gi|237752244|ref|ZP_04582724.1| ABC transport system permease [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376486|gb|EEO26577.1| ABC transport system permease [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 366

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 67/348 (19%), Positives = 124/348 (35%), Gaps = 35/348 (10%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL--- 84
           +F   T    Y   +   ILI+V+ A   +++ G  G LSL      AIGAY   ++   
Sbjct: 1   MFAAQTLLGDYALRIFNNILIFVILAVSYNLINGVTGQLSLEPNGFVAIGAYITALMLLD 60

Query: 85  ----------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                                  +   +  S +++    +++  P  + RGDYLAI TL 
Sbjct: 61  EDLKWSMFQLNDPHPFVLSMYSELLPALFCSGVVAAIIAVLLSFPVFRVRGDYLAIVTLG 120

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADR---------------LYFLGTTVRSLIRFFRFP 173
              I + + I     TNG  G+                    L    + +          
Sbjct: 121 FGFIIKILAINNPQWTNGAIGLNEIPNNQDSVVRYIEQTLLSLSSGDSVLSGFFNLLYTH 180

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
           +      I +++        S  +IL +  +    A + +RD++ A  ++       K  
Sbjct: 181 AFTGGANITVFFWSGIFATASVILILQIVYSKYGRAMKAVRDDEDAAIAMGINTFKIKTF 240

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
           AF+ S+   G+ G   A     I P +F F     ++ I++LGG+ S +       ++IG
Sbjct: 241 AFSTSAFLEGVGGGLMAVWLTTIDPKIFGFELTFQLLIIIVLGGLGSTTGAILGAILVIG 300

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             E    ++         F  S+         + L +++L     ++ 
Sbjct: 301 GGEWLRFLDQPLVFFGADFG-SYPGLRMVFFSVILLIIMLFAREGIMG 347


>gi|55980419|ref|YP_143716.1| branched-chain amino acid ABC transporter permease [Thermus
           thermophilus HB8]
 gi|55771832|dbj|BAD70273.1| branched-chain amino acid ABC transporter, permease protein
           [Thermus thermophilus HB8]
          Length = 355

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 68/310 (21%), Positives = 125/310 (40%), Gaps = 16/310 (5%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                +    +   IL+Y +   GL+I  G  GL+++       +GAY+  +L    GL 
Sbjct: 42  PQFLSRTQVFILDLILVYSIAVLGLNITTGYAGLINIGQAAFMGVGAYTAALLA-PAGLP 100

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            +L++P + +     G ++G+PSL+ +  YLA+ATL    +F+  +     +  G A   
Sbjct: 101 FYLVLPAAGLAGAFFGYLVGIPSLRVKHLYLAMATLAFQVVFEWTVGHLPLLNQGGAMPL 160

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
               L       R+   F+             YYV   +  L A     L RT    A  
Sbjct: 161 PRVSLLGYEVGFRNHYHFW-------------YYVSFAVLVLLALFFRNLLRTKYGRALV 207

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +RDN +A  ++       KL AFA+ + + G+AGA +A     +  + + FS +I +++
Sbjct: 208 AVRDNDRAADAMGMDPGRTKLFAFALGAFYAGVAGALYAYLSRAVVIEDYTFSVSIKLLA 267

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC--SFNMRHTTLMVIALF 329
           + I+GG+ +L       A L  +      ++                +        + + 
Sbjct: 268 MAIVGGLGTLVGSFLGPAFLELLDVNMEALSNLIKALGFSVAGVDVASALRPLAFGLVIV 327

Query: 330 LVILMRSHSL 339
           L ++     L
Sbjct: 328 LFLVFEPRGL 337


>gi|39937104|ref|NP_949380.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009]
 gi|39650962|emb|CAE29485.1| putative branched-chain amino acid transport system permease
           protein [Rhodopseudomonas palustris CGA009]
          Length = 357

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 73/343 (21%), Positives = 156/343 (45%), Gaps = 27/343 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           +IF  R ++   +L ++ V +               Y  S+ IQI I+ + A GL+I+VG
Sbjct: 21  TIFPTRTSRNAAMLGIVLVCFA--------PLVLSGYWLSILIQIGIFGIAALGLNILVG 72

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G +S+     + +GAY+   L + + + ++  IP++ +++   G++ G+P+ + +G Y
Sbjct: 73  FTGQISIGHAAFFLLGAYTSAYLNNHFPIPVFFAIPLAGLVTALVGLVFGVPAARLKGLY 132

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           L IATL    I  +   + +  + G                V ++   F      +  + 
Sbjct: 133 LVIATLAAQYILIDFFSRAEWFSGGS---------------VPAMANPFSLFGYVLQGDK 177

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +YV+L    +S  ++  L RT    A   +RD+  +   +   +   +  +FA+++ F
Sbjct: 178 QYFYVVLAYLLVSYILVTNLIRTRDGRALVAVRDHYLSAEIMGINLTKYRTLSFALAAFF 237

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE----L 297
            G+AGA +A  +  +S + F    +I+ ++++I+GG+ S+S     TA ++ + E    L
Sbjct: 238 AGIAGALYAHYQLVVSNEGFGIERSILFLAMIIIGGIGSISGTLMGTAFVVLLPETMEWL 297

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
             G+     +  L+ + +        + + + L ++     L 
Sbjct: 298 SSGLKGSAIDRALELNNNLTFLREIAIGLIIILFLVFEPDGLA 340


>gi|303246136|ref|ZP_07332417.1| urea ABC transporter, permease protein UrtB [Desulfovibrio
           fructosovorans JJ]
 gi|302492532|gb|EFL52403.1| urea ABC transporter, permease protein UrtB [Desulfovibrio
           fructosovorans JJ]
          Length = 538

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/301 (10%), Positives = 87/301 (28%), Gaps = 17/301 (5%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
              + ++ + GL+I  G +G++++       +GAY+  ++   +       +    + + 
Sbjct: 252 LGSVLLLTSLGLAITFGLMGVINMAHGEMLMLGAYATYMVQQSFRAYFPGAVDYYLLAAI 311

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
                +             I   +     + +L  W         + +      +     
Sbjct: 312 PFSFAVPFLVGMALER--CIIRFLYKRPLETLLATWGISLGLIQTVRLLFGAQNVEVQNP 369

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           S +       S +        +++   F+       L RT +    R +  ++    ++ 
Sbjct: 370 SWLSGGLEVVSGLTLTYNRLAIIVFTAFVVFLCWFLLNRTTLGLQVRAVTQDRDTAKAMG 429

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                  +  FA+ S   G+ G   A ++             +    +V+LGG+  L   
Sbjct: 430 IYTWKIDMWTFALGSGIAGLGG--LALTQVGNVGPELGQGYIVDSFMVVVLGGVGKLIGT 487

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                 L  + +                          +++  + + I  R   L   + 
Sbjct: 488 VVGALGLGVINKALEPFMGAVLGK-------------IIVLALVIVFIQKRPQGLFAFKG 534

Query: 345 P 345
            
Sbjct: 535 R 535


>gi|253575737|ref|ZP_04853072.1| high-affinity branched-chain amino acid ABC transporter
           [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844780|gb|EES72793.1| high-affinity branched-chain amino acid ABC transporter
           [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 322

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 81/317 (25%), Positives = 141/317 (44%), Gaps = 29/317 (9%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           + L +       Y+  + I I I+ M +  L++++G  G  +L     Y IGAY+  +L 
Sbjct: 18  IVLPIVLQLVNDYLLHVVIMIGIFSMLSLSLNVIIGYAGQFALGHAAFYGIGAYAAALLM 77

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
             + LS W+ +P SA I+G  G ++G P ++ RGDYL I TL   EI + I + W  +T 
Sbjct: 78  LHFHLSFWIALPASAAIAGLFGFLLGSPVIRLRGDYLGIVTLGFGEIVRLIFVGWVDLTR 137

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G  G+         G   R  + F+      V+                  +I  L  + 
Sbjct: 138 GPMGLPGIPAPSLFGFVFRDKLEFYYLILLLVLIT--------------YVVIHRLVHSG 183

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +  +  T+R+++    S+     + KL AF V   F G AGAF+A     +SPD F++ +
Sbjct: 184 VGLSLLTVREDETLAQSVGIRPNYYKLMAFTVGGFFAGAAGAFWATYISYVSPDAFRYLD 243

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           ++ ++++VILGG  SL        IL+   E+   ++ Y                  L+ 
Sbjct: 244 SVNILAMVILGGAASLPGSVLGAVILVAAPEILRYVSDY---------------RMILLG 288

Query: 326 IALFLVILMRSHSLLRL 342
           +A+ L+++ +       
Sbjct: 289 LAIVLMMIFKPSGFWGE 305


>gi|218781342|ref|YP_002432660.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218762726|gb|ACL05192.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 358

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 79/340 (23%), Positives = 140/340 (41%), Gaps = 24/340 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
                 +L  + +   LLLF F+ +   + Y   +   I + ++ A GL+++VG  G +S
Sbjct: 14  FTSRLGVLWFVILASGLLLFPFIASNYLKTYYIYVANCIAVNIIAAIGLNLLVGCTGQIS 73

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L     +A+GAY+   L  + G      + ++A IS   G ++GLP+L+  G YL+IATL
Sbjct: 74  LGHAGFFAVGAYATAALTGKLGAPFLPSLLIAASISALLGFLLGLPALRLEGPYLSIATL 133

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                   I+ K + +  G      A  L      + S                  YY+ 
Sbjct: 134 GFGLTITQIIGKIQYL--GARQGLHAPDLVVGPFNLNSDAEK--------------YYLF 177

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             M F +      L +T +  A+  IRD+  A  ++   ++  K  AFAVS+ F G+AG 
Sbjct: 178 AAMAFAACLFARNLMKTRVGRAFIAIRDSDVAASTMGVNLMIYKTLAFAVSAFFAGLAGG 237

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A     I PD F    +I+ ++++++GG+ S+S       +L  +      +      
Sbjct: 238 LYAFVLGYIQPDTFNLLMSIMFLAMIVVGGLGSISGAVAGAVLLTWLDLTLRNVLDVPVL 297

Query: 308 SLLKFDCS--------FNMRHTTLMVIALFLVILMRSHSL 339
                  S         +     +    + L++L     L
Sbjct: 298 GDWLKSLSQSYFSITGVSNIQYIVFGAIMVLIMLFEPLGL 337


>gi|330837052|ref|YP_004411693.1| inner-membrane translocator [Spirochaeta coccoides DSM 17374]
 gi|329748955|gb|AEC02311.1| inner-membrane translocator [Spirochaeta coccoides DSM 17374]
          Length = 322

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 80/307 (26%), Positives = 139/307 (45%), Gaps = 20/307 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +   + I   IY + A G +++ G  G+L+L     +AIG+Y+  IL +  G S W  +
Sbjct: 3   NFFLLIMIYTGIYALMAMGQNVITGYTGMLALCQAGFFAIGSYATAILSTTAGWSFWATL 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           PV+A++S   G+++GLP+L+ +GDYLAIATL   EI +NIL  W  +T G  GI      
Sbjct: 63  PVAALLSAVFGVLIGLPTLRLKGDYLAIATLGFGEIVRNILNNWDSLTRGPMGIQRIPMA 122

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +    ++                ++     ++      L R+    A   IR++
Sbjct: 123 SIFSFVINPYQKW------------AFLAMVWIFVLIAYLFFRRLARSRPGRALEAIRED 170

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  S+       K+SAFA+ +A  G+AG+  A     ++P  + F  +++V+ +V+LG
Sbjct: 171 EIAASSMGINTTAYKVSAFAIGAAAAGIAGSLQAVYSLSVNPGSYTFMVSVLVLCMVVLG 230

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM + +       IL  +         Y    +             L  + L ++++ R 
Sbjct: 231 GMGNFAASILGAFILQLI--------SYLPQLVGLSSVIPPQFKQILFGLILVVMMIWRP 282

Query: 337 HSLLRLR 343
             LL  R
Sbjct: 283 QGLLGRR 289


>gi|192290343|ref|YP_001990948.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|192284092|gb|ACF00473.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 328

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 70/327 (21%), Positives = 127/327 (38%), Gaps = 24/327 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L+                   Y+ ++ +  L+Y   + G +I+ G  G +SL   + + +
Sbjct: 13  LIVAALLAAAAACAPLFIKDVYVQNIMVLTLMYAALSQGWNILGGYCGQISLGHALYFGL 72

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +L ++ G+  W  +    +IS    + +G P+ + RG Y  IAT++++EI   +
Sbjct: 73  GAYTTALLFTKLGVLPWFGMIGGGIISSVIALALGYPTFRLRGHYFVIATIVIAEIGFLL 132

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
              W                 +                     ++  YY  L  C L+  
Sbjct: 133 FHNWDWAGAALGIDIPVRGDSWAKFQFTR-------------SKLPYYYFALVFCCLAWL 179

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           I  WL  +     WR ++DN  A  SL   +  +K+ A AVS+    + G+F+A     I
Sbjct: 180 ITWWLEDSKWGYWWRAVKDNPDAAESLGVVVFNSKMGAAAVSAFLTAVGGSFYAMFVSYI 239

Query: 257 SPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            P+    F  ++++    +LGG+ +L       AILI + EL           +      
Sbjct: 240 DPESVMTFQFSLLMALPAVLGGIGTLWGPVLGAAILIPLTELTRSFVGGSGRGV------ 293

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                  L    + ++ L R   L+ L
Sbjct: 294 ----DLILYGSVIVVIALARPEGLIGL 316


>gi|303233379|ref|ZP_07320048.1| branched-chain amino acid ABC transporter, permease protein
           [Atopobium vaginae PB189-T1-4]
 gi|302480508|gb|EFL43599.1| branched-chain amino acid ABC transporter, permease protein
           [Atopobium vaginae PB189-T1-4]
          Length = 415

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 73/345 (21%), Positives = 124/345 (35%), Gaps = 19/345 (5%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F L   +   I  +L+V+   +    + +    +Y  S+  QI IYV+ A  L++ VG L
Sbjct: 27  FKLTHTQGFLINLVLSVIVVAIGQFMISSHMVSRYQLSVIEQIGIYVIMAVSLNLAVGYL 86

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G L L      +IG Y   I   +    + L             + + L  +      LA
Sbjct: 87  GQLPLGHAGFMSIGGYVGAIFIMQTSQVLHLSQ---RAFVTGQPLAILLVVVGLILGGLA 143

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
            A   +      + +K   +     G     R++ L       I             ++ 
Sbjct: 144 AALCGLIIGIPALRLKGDYLAIVTLGFAEIIRVFILNFDSTFNIPLTGGAKGLTGIFLYT 203

Query: 184 YYV-LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            ++    +  L   +I  L ++    A   IRDN+ A  +    + F K  AF +S+AF 
Sbjct: 204 NFINTAVVVALVLFVIHTLMKSRWGRAILAIRDNEIAAEACGINLTFHKTLAFVLSAAFA 263

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           GMAG  +A     ++P  F F +++ V+ +V+LGGM S      A   L  + E      
Sbjct: 264 GMAGVLYAGCIGVMAPAKFGFMKSVEVLVMVVLGGMGSQLGSVVAAVGLTVLPEALRSFA 323

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                               +  + L L ++ R   L      S 
Sbjct: 324 D---------------LRMIVYSVVLILAMMFRPRGLFGSYDFSL 353


>gi|323494089|ref|ZP_08099205.1| urea ABC transporter, permease protein UrtB [Vibrio brasiliensis
           LMG 20546]
 gi|323311716|gb|EGA64864.1| urea ABC transporter, permease protein UrtB [Vibrio brasiliensis
           LMG 20546]
          Length = 546

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 98/306 (32%), Gaps = 21/306 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+   GL+I  G +G++++       +GAY+  ++       I   +  S  +
Sbjct: 261 LSLGSVLVLAGIGLAITFGVMGVINMAHGELIMLGAYTTYVMQQLLPNHIGFALLASIPM 320

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++G+   +    +L    L      + +L  +      +  +           +
Sbjct: 321 AFIVSGLVGVAIERSVIRHLYGRPL------ETLLATFGISLILQQAVRSIFSPLNRSVS 374

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +      ++ +       Y++L    +   +++ L++T +    R +  N+    +
Sbjct: 375 TPDWMAGALEINTMLSLTYNRLYIILFCALVFIGLVMTLKKTPLGLQVRAVSQNRSMARA 434

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           F + S   G+AG   +   +         +  I    +V+ GG+ +L 
Sbjct: 435 MGIRSERVDALTFGLGSGVAGVAGVALSQLTNV--GPNMGQAYIIDSFMVVVFGGVGNLW 492

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L    ++                         LM++ + L I  R   L   
Sbjct: 493 GTLVAGLGLGLFNKVLEPWAGAVLAK-------------ILMLVFIILFIQKRPRGLFPQ 539

Query: 343 RTPSNF 348
           R  +  
Sbjct: 540 RGRAAE 545


>gi|163739542|ref|ZP_02146952.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis BS107]
 gi|161387295|gb|EDQ11654.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis BS107]
          Length = 361

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 70/325 (21%), Positives = 135/325 (41%), Gaps = 17/325 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L V   L++          ++       +LI+ +   GL ++ G  G  SL      AIG
Sbjct: 22  LLVYGALVMLALALPLLINEFYIGEVTNVLIWAIAGLGLMLLTGQTGQASLGHAAFLAIG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  IL  +      +  P++ +I+G  G I+ +P+L+  G YLAIAT+ +S +  +I+
Sbjct: 82  CYANTILIEQGLP-FIVAFPLAGVITGIVGGIIAIPALRLHGIYLAIATIALSILADDII 140

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +  +P T G +G                +IR F          +  YY++ G+  +    
Sbjct: 141 VLLEPWTGGVSGK------------FPDVIRLFGIEIERWTMPVRFYYLVFGVTVICTLF 188

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L R+ +  A+  +RD++ +  ++   I   K +AF +S    G AGA         +
Sbjct: 189 YRNLLRSPLGRAFAAVRDSEVSATAMGVHIARTKATAFGLSCMITGWAGALMGYYAGAFN 248

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            + F    +I ++ ++++GG+ S+        ++  + +    +      S+L    +  
Sbjct: 249 NETFSLVISITLLMMIVIGGLGSIHGAFFGAVVVAFLPQGLSILKD----SVLGSGVAIP 304

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
              T +  + L L IL     L   
Sbjct: 305 GLETGVFGMILILFILFEPMGLYGR 329


>gi|115372910|ref|ZP_01460215.1| branched-chain amino acid ABC transporter, permease protein
           [Stigmatella aurantiaca DW4/3-1]
 gi|310818509|ref|YP_003950867.1| branched chain amino acid ABC transporter permease [Stigmatella
           aurantiaca DW4/3-1]
 gi|115370177|gb|EAU69107.1| branched-chain amino acid ABC transporter, permease protein
           [Stigmatella aurantiaca DW4/3-1]
 gi|309391581|gb|ADO69040.1| branched chain amino acid ABC transporter, permease protein
           [Stigmatella aurantiaca DW4/3-1]
          Length = 353

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 54/321 (16%), Positives = 107/321 (33%), Gaps = 12/321 (3%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                  +   +  ++ + V+ A  L+IV G  G  S+      A+GAY   +L      
Sbjct: 35  WLLSGSPFAQQLTYRVGVNVVLAVSLNIVNGMTGQFSIGHAGFMAVGAYVSSVLSLSLK- 93

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                  ++                       A A         ++ ++   +     G 
Sbjct: 94  ------EIALSFLPVAVSDQLFFIAALLVGGAAAALCGFLVGLPSLRLRGDYLAIVTLGF 147

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R+    T V                 +  ++V L        +   +  ++   + 
Sbjct: 148 GEIIRVIVQNTAVFGRALGLSGIPPATSVMMVGFWVFLT-----VLVARRIAGSSHGRSL 202

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             IR+++ A  ++       K+ AF +SS F G+AG  FA     I+P+ F F +++ ++
Sbjct: 203 WAIREDEVAAEAMGVDTTGYKVRAFVISSFFAGVAGGLFAHFVQVINPNSFTFVQSMEIV 262

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            +V+LGG+ S +    A   L  + E    +               +     L  + L  
Sbjct: 263 VMVVLGGLGSTTGAIVAAVFLTLLPEALRSLLPMLTEEGSSLSSRVDQIRMPLYGLLLVA 322

Query: 331 VILMRSHSLLRLRTPSNFLER 351
           ++L+R   L   +     L R
Sbjct: 323 LMLLRPQGLFGTKEIWEVLPR 343


>gi|89056496|ref|YP_511947.1| inner-membrane translocator [Jannaschia sp. CCS1]
 gi|88866045|gb|ABD56922.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Jannaschia sp. CCS1]
          Length = 384

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 74/342 (21%), Positives = 139/342 (40%), Gaps = 18/342 (5%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F +  ++Y     L+     +          +  + +S+ I  LIY + A GL+I+ G  
Sbjct: 43  FPILFDRYRYYFVLIVGALII------PFVLNDYWANSILIPFLIYAIAAIGLNILTGYC 96

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +  GL +  +  +S +++   G+  GLPSL+ +G YL
Sbjct: 97  GQVSLGTGGFMAVGAYTSYKLMTAFPGLDMISVTLLSGVMTAMVGVAFGLPSLRIKGFYL 156

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  K     N  A   ++             +               
Sbjct: 157 AVATLAAQFFLVWLFNKVPWFYNYSASGQISAPERDFFYFTGIPVT------GPNAEAWA 210

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y       F+ A +   L R ++   W  IRD   A   +    + AKL+AFAVSS ++
Sbjct: 211 KYLFCFLFVFVLAWVARNLTRGSVGRQWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFYV 270

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G+AGA             +++  +++ +V+ ++I+GG+ S+       A ++ +  +   
Sbjct: 271 GIAGALLFTVYLGAVEVGEVYGITKSFLVLFMIIIGGLGSIFGSFAGAAFMVILPVVLRN 330

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 N        F      ++   +   +++  H L RL
Sbjct: 331 FLTGTMNWDSALATHF---EFVIVGALIMFFLIVEPHGLARL 369


>gi|197118327|ref|YP_002138754.1| branched-chain amino acid ABC transporter membrane protein
           [Geobacter bemidjiensis Bem]
 gi|197087687|gb|ACH38958.1| branched-chain amino acid ABC transporter, membrane protein
           [Geobacter bemidjiensis Bem]
          Length = 297

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 69/325 (21%), Positives = 136/325 (41%), Gaps = 38/325 (11%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           FL         Y+  + + I I ++ A GL+++VG  G LSL      +IGA++  ++  
Sbjct: 4   FLNSLVGAVDPYMMQILVNIGIAIVLALGLNVIVGLTGQLSLGHAAFMSIGAFTSAMVTI 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
           + GL   + + V+ +++G     +G P L+  GDYLAI TL  +EI +   + ++     
Sbjct: 64  KTGLPFSMNLLVTGVVTGIVAAAIGFPILRLTGDYLAICTLGFAEIVKVFFLNFE----- 118

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                                +            I M   +  +  LS  ++ +++ +  
Sbjct: 119 ------------------PTNKALGLTVPPAKTMIPMPIYVWVVAILSIVLVTFVQSSRF 160

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A + IR+++ A  ++       K+ AFA+ S   G+ G  +A     I+P  F F ++
Sbjct: 161 GRALKAIREDEIAAEAMGINTARYKIQAFALGSFMAGVGGGLYAHFLSYINPSDFGFLKS 220

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           + ++++V+LGG+ S+      +++L    E    M+ Y                  +   
Sbjct: 221 VDILAMVVLGGLGSVPGTVIGSSLLASAPEFLRFMSQY---------------RMLVYGA 265

Query: 327 ALFLVILMRSHSLLRLRTPSNFLER 351
            L  +++ R + LL     +  L R
Sbjct: 266 LLVFLMVFRPNGLLGGVNFTELLLR 290


>gi|319777976|ref|YP_004134406.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317171695|gb|ADV15232.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 320

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 87/330 (26%), Positives = 151/330 (45%), Gaps = 30/330 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             ++      L    +    +  Y+  +    L+YV+   GL+IVVG  GLL L     +
Sbjct: 20  WSVVLPGLAALALALVLPQFANAYVTEVATTALLYVVLCLGLNIVVGYAGLLDLGYAAFF 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GAY+  IL + +G + WL IPV+   +   G+I+G P+L+ R DYLAI TL   EI +
Sbjct: 80  AVGAYTSGILTAEFGFNFWLTIPVAMAAACVAGIIIGAPTLRLRSDYLAIVTLGFGEIVR 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I      IT G +G+   +R    G  +  +  F              YY  L +  L+
Sbjct: 140 IIARNL-DITGGASGLIGIERPEIFGFRLMQVQHF--------------YYAFLVLALLT 184

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A + L + R+ +  AW  +R ++ A   +    + AKL A+ + +    +AG  +AA   
Sbjct: 185 AFVCLSVERSRMGRAWFYVRYDEDAAAGIGINRVTAKLQAYMMGAVIASVAGCLYAAKMT 244

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ISP+ F F+++++++  V+LGGM  +  +     ++  + E+  G   Y          
Sbjct: 245 AISPESFTFNQSLLILLGVVLGGMGRIPGVVLGAILVALLPEVLRGAGTY---------- 294

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                   +  +AL  ++L R + L   + 
Sbjct: 295 -----RPLVTAVALLAIMLFRPNGLWPDKR 319


>gi|237808383|ref|YP_002892823.1| urea ABC transporter, permease protein UrtB [Tolumonas auensis DSM
           9187]
 gi|237500644|gb|ACQ93237.1| urea ABC transporter, permease protein UrtB [Tolumonas auensis DSM
           9187]
          Length = 533

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 101/306 (33%), Gaps = 21/306 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                I V+   GL+I  G +G++++       +GAY+  ++         + + +S   
Sbjct: 248 ISLGSILVLAGIGLAITFGVMGVINMAHGEMMMLGAYTTFVMQKLLPNEPGIALLLSIPA 307

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++G+   +    +L    L      + +L  +      +  +            
Sbjct: 308 AFCVSGLVGIVIERSVIRFLYGRPL------ETLLATFGISLLLQQAVRSIFSPLNQSVV 361

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           + S +      + F+   +   +++L    + A ++  L+R+ +    R +  N+    +
Sbjct: 362 MPSWMSGTWVWNDFLSLTLNRMFIILFSLLVFAGLMWLLKRSRLGLEVRAVSQNRAMARN 421

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +     +     F + S   G+AG   +   +            I    +V+ GG+ +L 
Sbjct: 422 MGVRSDWVNARTFGLGSGIAGIAGVALSQLTNV--GPNLGQGYIIDSFMVVVFGGVGNLW 479

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L    +L                         L+++A+ L I  R   L   
Sbjct: 480 GTLVAGLSLGIANKLLEPYAGAVLAK-------------ILILVAIILFIQKRPRGLFPQ 526

Query: 343 RTPSNF 348
           R  +  
Sbjct: 527 RGRAVE 532


>gi|90417878|ref|ZP_01225790.1| branched-chain amino acid ABC transporter, permease protein
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90337550|gb|EAS51201.1| branched-chain amino acid ABC transporter, permease protein
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 408

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 120/354 (33%), Gaps = 18/354 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
              A+    +L + +           +  +  I+ +FA G +I+ G  G LS        
Sbjct: 36  AFTAIFAAAVLTMPIWLAPIGAGYPDILQKFAIFGIFAIGFNILFGFSGYLSFGHAAFLG 95

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI--- 132
            G+Y+ V +     ++    +P + +++G   +++G   L+  G Y +I TL  +++   
Sbjct: 96  TGSYAAVWMFKLLSMNAIFAVPFAIIVAGLLALVIGFVCLRRAGIYFSILTLAFAQMSYN 155

Query: 133 -FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
              ++L        G        RL                     +     +Y    + 
Sbjct: 156 LAYSVLTPITNGETGLQISRSDPRLIDRALGEVGAGLPKPNFFGIELQGYPGFYFCAILL 215

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L   + L +R +        I+ NQ              L+AF +S  + G+AG   A 
Sbjct: 216 VLGFFLALRIRNSTFGMMLFAIKSNQNRMGYTGFAARPYLLTAFVISGMYAGLAGGLLAV 275

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           +      D  +++ +  V+ + ILGG+ +L       A++  + ++    N  +      
Sbjct: 276 TDPLAGADRMQWTASGEVVLMTILGGVGTLLGPVIGAAVMKYLEQIFSSFNDGFLYRSFD 335

Query: 312 FDCSF-------------NMRHTTLMVIALFLVILMRSHSLL-RLRTPSNFLER 351
           F   +                    + +   ++++     ++  LR       +
Sbjct: 336 FLPGWAQNVAVEITSPFVGEGWHLTLGLLFMVIVIFLPGGIMEGLRRIGALFHK 389


>gi|163839015|ref|YP_001623420.1| branched-chain amino acid transport system permease protein
           [Renibacterium salmoninarum ATCC 33209]
 gi|162952491|gb|ABY22006.1| branched-chain amino acid transport system permease protein
           [Renibacterium salmoninarum ATCC 33209]
          Length = 390

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 73/337 (21%), Positives = 144/337 (42%), Gaps = 29/337 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMG-IQILIYVMFAWGLSIVVGSLGL 65
           R  ++  +L ++ + Y L +      T       ++   Q+ ++ + A GL+IVVG+ GL
Sbjct: 32  RPQQWLWLLIVVGLAYALPVLNPPIITTEPGNNFALACFQMAVFALGAVGLNIVVGNTGL 91

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSI----WLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           L L  +  +A+GAY+  +L S     +       +PV+  ++   G+I+G+P+L+ RGDY
Sbjct: 92  LDLGYIAFFAVGAYTAAMLTSPDSPFVKVPYLWTVPVAMAVTIFFGVILGVPTLRLRGDY 151

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LAI TL   EI + +      +        +        +           P        
Sbjct: 152 LAIVTLGFGEIVRIMATIIPAMRGQVGFQNIGRPPGKDAS---------GVPIFSNSNGT 202

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             Y++ + +  +   ++  L R+ +  AW +IR+++ A   +       K+  FA+ +  
Sbjct: 203 PWYWLTITVIIIVLLLVGNLERSCVGRAWISIREDEDAAEIMGVPTFKYKVWFFALGAGI 262

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AGA FA +   ++   F    +I+ ++ V+LGG  + +      A++  V      +
Sbjct: 263 GGLAGALFAGANGFVNNQKFDVQTSILFLAAVVLGGAGNKAGAIIGGAVVAYVPLRFTAI 322

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             Y                  +   AL L+++ R+H 
Sbjct: 323 ADY---------------KYLIFGAALVLLMIFRAHG 344


>gi|126668636|ref|ZP_01739588.1| Branched-chain amino acid ABC-type transport system, permease
           components [Marinobacter sp. ELB17]
 gi|126626895|gb|EAZ97540.1| Branched-chain amino acid ABC-type transport system, permease
           components [Marinobacter sp. ELB17]
          Length = 534

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 99/306 (32%), Gaps = 21/306 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+ A GL+I  G +G++++       +GAY+   +         L + +S   
Sbjct: 249 LSMGSVLVLAAIGLAITFGVMGVINMAHGELIMLGAYTTWGMQQLLPGQPGLALILSIPA 308

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 + G+   +    YL    L      + +L  +      +  +            
Sbjct: 309 GFLVAALAGVVIERTVIQYLKGRPL------ETLLATFGVSLILQQLVRTVVSPLNRTVI 362

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +      +  +   +   YV+     + A ++L +R+T +    R +  N+    S
Sbjct: 363 TPEWMSGSVMINEALSLTLNRLYVIGFALVVFAGLMLIMRKTRLGLEVRAVTQNRAMARS 422

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +        +  FA+ S   G+AG   A S+          S  I    +V+ GG+ +L 
Sbjct: 423 MGIRATRVDILTFALGSGVAGLAGV--ALSQITNVGPNLGQSYIIDSFMVVVFGGVGNLW 480

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L  + +L                         ++++ + L I  R   L   
Sbjct: 481 GTLLAGLTLGTINQLLEPWVGAVLAK-------------IMVLVMIILFIQKRPRGLFPQ 527

Query: 343 RTPSNF 348
           +  +  
Sbjct: 528 KGRAAE 533


>gi|262202786|ref|YP_003273994.1| inner-membrane translocator [Gordonia bronchialis DSM 43247]
 gi|262086133|gb|ACY22101.1| inner-membrane translocator [Gordonia bronchialis DSM 43247]
          Length = 329

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 58/310 (18%), Positives = 125/310 (40%), Gaps = 6/310 (1%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           +G   + Y + A GL++  G  GLL+   +    +G Y   I+   Y   +WL   V   
Sbjct: 15  VGPSAIFYALLAIGLNLHFGYAGLLNFGQIGFALLGGYGVGIMAVNYDQPLWLGAIVGIA 74

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL--IKWKPITNGKAGIYVADRLYFL 159
            +    M++G+P+L+ R DYLAI T+  SEI + +        +T+   GIY     ++ 
Sbjct: 75  AAAVLAMVLGVPTLRLRADYLAIVTIAASEILRLVFRSTSTDEVTHSTNGIYGYSAPFYA 134

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            +   +  ++      F+  +++   +   +  L   ++  L  +      + +R+++ A
Sbjct: 135 QSPFDNGKQYSFLGIKFIGGDLWAMVIGWSIVALLCLMVYLLSHSPWGRVLKAVREDEDA 194

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L     F K+ A  +      + G F + +   I+PD F  ++       +ILGG  
Sbjct: 195 ARALGKNAYFFKMQALVLGGCIGALGGVFNSLASPSINPDFFSTAQTFFAYGALILGGAA 254

Query: 280 SLSKIAKATAILIGVVE----LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           ++        +   ++     L           +   +         ++ +A+ L+++ R
Sbjct: 255 TVFGPVVGAMLFWFLLAIPDVLLRQATAGDNPLISMTEQQVGAVRYVILGLAIMLMMVFR 314

Query: 336 SHSLLRLRTP 345
              +L  +  
Sbjct: 315 PQGILGNKRE 324


>gi|302876894|ref|YP_003845527.1| inner-membrane translocator [Clostridium cellulovorans 743B]
 gi|307687580|ref|ZP_07630026.1| inner-membrane translocator [Clostridium cellulovorans 743B]
 gi|302579751|gb|ADL53763.1| inner-membrane translocator [Clostridium cellulovorans 743B]
          Length = 357

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 74/356 (20%), Positives = 143/356 (40%), Gaps = 45/356 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   ++     +  L L +F+       Y   +     IYV+ A  ++++ G  GL SL 
Sbjct: 2   KKKNLILTAIFLVVLFLMVFVADKNMDSYKVRILNLCAIYVILAVSMNLINGFTGLFSLG 61

Query: 70  CVIAYAIGAYSYVILGS-------------------RYGLSIWLLIPVSAMISGACGMIM 110
                AIGAY+  +L                        +   + + +  ++S    +++
Sbjct: 62  HAGFMAIGAYTTALLTMSSETKAQVFFMQPIIEPLANLQVPFPVALLIGGILSALVALLI 121

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
           G P L+ RGDYLAIATL   EI + I    + ITNG  GI                    
Sbjct: 122 GAPILRLRGDYLAIATLGFGEIIRVIFTNTQNITNGSMGIKSIPANTN------------ 169

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                         +   G+  ++  +I  L  ++   A + IR+++ A  ++   +   
Sbjct: 170 -------------LWWSFGIAVITVILIASLINSSHGRALKAIREDEIAAENMGINLFKH 216

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           K+ +FA+ + F  + G   A+    I P MF+F+    ++ I++LGGM+S+S    +  +
Sbjct: 217 KMISFAIGAFFAAIGGGLMASLICTIDPLMFRFTMTYNILLIIVLGGMSSISGSVISAFV 276

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
           +   +E    ++       ++      MR     ++ +  V+  R + L+  +  +
Sbjct: 277 ITIAMEALRFLDESINLGFVRLKGISGMRMVVFSILLMVAVLFFR-NGLMGNKEFT 331


>gi|323701776|ref|ZP_08113447.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574]
 gi|323533312|gb|EGB23180.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574]
          Length = 301

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 69/322 (21%), Positives = 133/322 (41%), Gaps = 41/322 (12%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           + +     Y   + I + IY++ A GL+++ G  G LS       +IGAY+  IL  R  
Sbjct: 6   IFSMFLNDYYIQVLIMLGIYLIGALGLNLISGVTGQLSFGHAAFLSIGAYTSAILSLRLH 65

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L   +++     ++   G+++G P+L+  GDYL IATL   EI + + +    IT G  G
Sbjct: 66  LPFPMVLLAGGFMAALWGVLLGYPTLRLTGDYLGIATLGFGEIVRVVFLNL-SITGGALG 124

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +    R                              +++ +  L+   +  L  +    A
Sbjct: 125 LSGIPR-------------------------YTTLTLVIVLVVLTVWAMYRLENSRFGRA 159

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              IR+++ A  ++   I  +K++AFA+ +   G++G  +A     ++P  F F ++   
Sbjct: 160 LVAIREDEIAAEAMGVNITTSKITAFAIGTFLAGISGGLYAHLIQYLNPQDFGFQKSFDF 219

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           ++ V+LGG+ S+  +   T +L    E    +  Y                  +    + 
Sbjct: 220 LTFVVLGGLGSIPGVILGTTVLTLAPEFLRFVAEY---------------RMMVYGALMV 264

Query: 330 LVILMRSHSLLRLRTPSNFLER 351
           ++++ R   LL     +  L R
Sbjct: 265 IMMIFRPRGLLGGVKLTRLLSR 286


>gi|327400895|ref|YP_004341734.1| ABC transporter integral membrane subunit [Archaeoglobus veneficus
           SNP6]
 gi|327316403|gb|AEA47019.1| ABC-type transporter, integral membrane subunit [Archaeoglobus
           veneficus SNP6]
          Length = 355

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 67/324 (20%), Positives = 137/324 (42%), Gaps = 9/324 (2%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +      + L ++    ++  Y+      I I+++   G++I+ G  G +SL      A+
Sbjct: 24  VALASALVFLAVYPFVFRNDIYMLYWANYIAIFLIATLGINILTGYAGQISLGHGAFMAV 83

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  I   + GL   + I V A+ +   G++ G+PSL+ +G YLAIATL    +   +
Sbjct: 84  GAYTSTITAIKLGLPFPVTIFVGALTAMLFGLLFGVPSLRLKGFYLAIATLAAQYLVDFL 143

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           L+  K          +      +     + +    F         + Y+V + +      
Sbjct: 144 LVNPKLAWLTGGSAGLVVPEASILGFTITKVPESDF---------YYYFVSVPLAVFFFV 194

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               L R+ +  AW  IRDN  A   +   +   KL AFA++S + G+AGA +A     +
Sbjct: 195 FAANLTRSDVGRAWVAIRDNDIAAEIMGINVFKYKLLAFAIASFYAGVAGALWAYYVGYL 254

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +P+ +  + +I  ++++++GG+         T  ++ + EL         +  +    + 
Sbjct: 255 TPEHYTIALSIDFVAMILIGGLGRHWGSLIGTVFVLSLPELLKRAIIPAISGFMPVTFTA 314

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
                 +    + L ++   H ++
Sbjct: 315 ESLRPIIFGATIILFLIAEPHGIV 338


>gi|240141708|ref|YP_002966188.1| putative ABC transporter, putative membrane protein precursor with
           two ATP-binding domains [Methylobacterium extorquens
           AM1]
 gi|240011685|gb|ACS42911.1| putative ABC transporter, putative membrane protein precursor with
           two ATP-binding domains [Methylobacterium extorquens
           AM1]
          Length = 823

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 71/333 (21%), Positives = 137/333 (41%), Gaps = 31/333 (9%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           +       +   +  L L        +  Y   +   + + V+   GL++++G  GL+S 
Sbjct: 3   SPLRAPAAMPLAILALTLAGLGLVAATSGYSHFVIALVALTVVAGTGLNVLLGLAGLISF 62

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                YA+GAY+  IL  +     WL +P +A +S   G  + +P+++ RG YLA+ T+ 
Sbjct: 63  GHAGFYALGAYASAILTLKGVS-FWLALPAAAGLSALVGAALAVPAMRVRGPYLAMVTIA 121

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
              + ++ LI+   +T G+ G+ VA                       ++ E  + ++ +
Sbjct: 122 FGFLVEHALIEGGELTGGQNGLVVATGPS---------------LFGLLLGERDLAWLAV 166

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
               LS      LR   +  A R +RD   A  SL    +  K +AFA+S+A  G+AGA 
Sbjct: 167 IGAGLSLYGFHRLRHARLGQALRAVRDADVAAASLGFDPVRVKTAAFAISAALTGLAGAV 226

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                  I+P  F F+++I+ +  V++GG  ++        + + + E   G+  Y    
Sbjct: 227 LPPLMLFIAPSSFPFTQSILFVLAVVVGGAGTVLGPLFGALVTVLLPEALAGLAEY---- 282

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                            +   +V+ +    ++ 
Sbjct: 283 -----------RLLFFGLTTLVVLWLVPAGIVG 304


>gi|311104161|ref|YP_003977014.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310758850|gb|ADP14299.1| inner-membrane translocator 16 [Achromobacter xylosoxidans A8]
          Length = 597

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 105/314 (33%), Gaps = 14/314 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             ++   I +Y M A GL ++ G  GL S        +GAY+  +L +R      L   +
Sbjct: 25  YVTLLNYIGLYAMVALGLVLLTGVGGLTSFGQAAFVGVGAYTTALLTTRADT---LPSWL 81

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +     ++   +L     YL  A  +         +    I  G +  +V   +  
Sbjct: 82  AWLGASPWLTLLAGLALTVVIAYLLGAITLK---LSGHFLPLGTIAWGLSLYFVFGSVEG 138

Query: 159 LGTTVRSLIRFFRFPSSFVIYEI-FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
           LG               + + +   +YY++     ++      L  +    A R ++  +
Sbjct: 139 LGGHTGIPDIPAISLFGWTLNQGDNIYYLIWAFLLVAVWSTQNLLDSREGRAIRALKGGR 198

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               S+      +++  F +++     +G  +A  +  ++P+ F     I  + + ++GG
Sbjct: 199 VMAESMGVDTARSRMVIFIIAALQACASGWLYAHMQRFVNPNPFGLQMGIEYLFMTVIGG 258

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
              +        +   + +               F          +    + L++     
Sbjct: 259 AGQVWGALVGAGVFTVLKQWLQDWMPKLLGQTGNF-------EVIVFGFGMVLLLHRARS 311

Query: 338 SLLRLRTPSNFLER 351
            L  + T    +++
Sbjct: 312 GLWPVLTRCVPVKK 325


>gi|295696320|ref|YP_003589558.1| inner-membrane translocator [Bacillus tusciae DSM 2912]
 gi|295411922|gb|ADG06414.1| inner-membrane translocator [Bacillus tusciae DSM 2912]
          Length = 326

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 62/333 (18%), Positives = 132/333 (39%), Gaps = 42/333 (12%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              + +    ++ L +       Y+  +  Q+ + V+ A  L+++ G  G  S+      
Sbjct: 21  WIGIGLALYAIIGLLIDNGIIDSYMALIVYQMCLNVVLAVSLNLINGFTGQFSIGHAGFA 80

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GAY   +L ++  L  +  + ++A+ +   G+++G+P+L+ +GDYLAI TL   +I Q
Sbjct: 81  AVGAYVSAVLTAKMQLPFFPALIIAALAAAVAGLLIGIPTLRLKGDYLAITTLGFGQIIQ 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ILI  + +          +                             +  L     ++
Sbjct: 141 VILINLQYVGGAAGMTVHKE---------------------------TNFTWLYFAALIT 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +I     +    A   +R+N+ A   +   + + K+ AF++ + F G+AGA  A +  
Sbjct: 174 VVVIANFVHSRHGRACIAVRENEVAAEMMGINVTYYKVLAFSMGALFAGVAGALSAHTFY 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            I P  + F ++  ++ IV+LGG+ S++       +L  +                    
Sbjct: 234 FIKPTSYGFLQSFNILVIVVLGGLGSITGSILGAVVLTLITAFLQDY------------- 280

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                   +  + L L+++ R   L+  +    
Sbjct: 281 --PQWQMVIYSLILVLIMIFRPQGLMGTKEFRL 311


>gi|317484132|ref|ZP_07943062.1| branched-chain amino acid transport system/permease component
           [Bilophila wadsworthia 3_1_6]
 gi|316924636|gb|EFV45792.1| branched-chain amino acid transport system/permease component
           [Bilophila wadsworthia 3_1_6]
          Length = 346

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 79/306 (25%), Positives = 132/306 (43%), Gaps = 30/306 (9%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
            M  +I IY   A  L++++G  GL  +     +A+GAY+  IL + Y   ++  +P++ 
Sbjct: 44  DMLNKIGIYAALALSLNLILGQTGLFHMGHTAFFAMGAYTTAILNTVYHWPVFATMPIAG 103

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-IKWKPITNGKAGIYVADRLYFL 159
           +++     ++  P +  RGDYL I T+ + EI +  L      +T G  GIY   R    
Sbjct: 104 VLAAIFAFVLAKPIIHLRGDYLLIVTIGIVEIVRIALTNNLFGLTGGANGIYGIARPSLF 163

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G    S  R F    +F I  +F++YVL                +    A   IR +  A
Sbjct: 164 GMVFSSPKRQFYLIWTFTILTMFLFYVL--------------EHSRFGRALNYIRYDDLA 209

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                  +   KL AF V + + GM G  FAA+   I P  F F E++I+ +IVILGG  
Sbjct: 210 ASGCGIDVTQYKLMAFTVGAFWAGMVGTLFAANIRTIEPTSFNFYESVILFAIVILGGSG 269

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S++ +     +LIG+ ++                         +   A+ +++++    L
Sbjct: 270 SIAGVVLGAFLLIGLQDVFREFE---------------SARMLIFGAAMMVMMIICPQGL 314

Query: 340 LRLRTP 345
           L  R  
Sbjct: 315 LPPRRR 320


>gi|322385049|ref|ZP_08058699.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus cristatus
           ATCC 51100]
 gi|321270959|gb|EFX53869.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus cristatus
           ATCC 51100]
          Length = 317

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 81/340 (23%), Positives = 146/340 (42%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + +   L +   LL+ +         +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNALWLALILFGYLLMTVLASTGILNPFYLQIFEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  S    + ++ + V A+I+GA  +++G+P+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYAVAIMGSKSPNYGTFFIAMLVGAVIAGAVALLVGIPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + +++    +TNG AGI                                   ++
Sbjct: 126 GVSEIIRILIVNGGDLTNGAAGILSIPNFTSWQ-------------------------LV 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++  + L   R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+
Sbjct: 161 YVFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTKIKVIAFVFGAITASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F   I V+ IV+ GG+ S++    A  +L  +  L   +      
Sbjct: 221 LQAGFVGSVVPKDYSFINTINVLIIVVFGGLGSMTGAIVAAVVLGILNMLLQDI------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                    +     +  +AL LV++ R   LL     S 
Sbjct: 275 ---------SSVRMIVYSLALILVMIFRPGGLLGTWEFSL 305


>gi|291518118|emb|CBK73339.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           (TC 3.A.1.4.-) [Butyrivibrio fibrisolvens 16/4]
          Length = 359

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 71/344 (20%), Positives = 143/344 (41%), Gaps = 25/344 (7%)

Query: 1   MSIFSL--RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSI 58
           MS+F    +  +       + VV  +++ +  G       +  + + +  Y + A GL++
Sbjct: 1   MSLFKNLNKSTQKLLGTIGVIVVLYIVMTIMDGTGNLSSLMKGLLVPVCAYSLVAVGLNL 60

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI------WLLIPVSAMISGACGMIMGL 112
            VG LG LSL       +GA+S       +  +I       + + +   ++   G ++ +
Sbjct: 61  CVGYLGELSLGHAGFMCVGAFSSAFFSRAFQDAIPDVPRYIIALVLGTAMAALFGFLIAI 120

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
           P L+ +GDYLAI TL   EI +N++      T+ +   +       +G  +   +     
Sbjct: 121 PVLRLKGDYLAIVTLAFGEIIKNVINVMYVGTDSEGMHFSMKDQLSMGMALDGKMIINGP 180

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
                      + + + +  L+  +      +    A + IRDNQ A  ++   +   KL
Sbjct: 181 QGITGTPRQSTFTIAVLLLILALVVTHNFVNSRTGRAVKAIRDNQIAAETVGLPVTKYKL 240

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN--IIVISIVILGGMTSLSKIAKATAI 290
           +AF +S+A  G+ G  +A + + ++     F  N  I+++  V+LGG+ + S    A  +
Sbjct: 241 TAFTISAAIAGLGGVLYAHNINSLTATTNNFGYNMSIMILVYVVLGGIGNFSGSVVAAVV 300

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           L  + EL  G++ Y                  +  I L +++L 
Sbjct: 301 LTMLPELLRGLSTY---------------RMLIYSIVLIVLMLF 329


>gi|224369228|ref|YP_002603392.1| LivM3 [Desulfobacterium autotrophicum HRM2]
 gi|223691945|gb|ACN15228.1| LivM3 [Desulfobacterium autotrophicum HRM2]
          Length = 334

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 68/328 (20%), Positives = 117/328 (35%), Gaps = 24/328 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L   A++    L   +       +   + I IL++   +   +I+ G  G +S    + +
Sbjct: 11  LIWFALIIGFALLPVIPGVFDSSFTQHVFILILLFACMSQSWNIIGGYCGQVSFGHSVFF 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IGAY   +    YGL  W    V A  +    + +  P  +  G Y AIAT  M EIF 
Sbjct: 71  GIGAYGAGMAVVTYGLPPWPGALVGAAAAALVAVAISWPVFRLSGHYFAIATFAMVEIFN 130

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + + W  +       Y               +        +   +I  YY  L +    
Sbjct: 131 RLFMVWYWVGGALGLDY-------------PFVDEGIKNFIWFENKIPYYYGALVLFIFI 177

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              + WL R  +    + +R+ QK   SL       KL A  +S+   G+ GAFF     
Sbjct: 178 FGTVRWLERNRLGYYLKAVREGQKTAESLGVNSTLVKLLAMGISAFLAGLCGAFFVQYNY 237

Query: 255 RISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           R+ P M      ++  + I ILGG  +         +LI + E          + +    
Sbjct: 238 RVDPAMVMSLDMSMKFVLITILGGTGTFFGPLLGAMVLIPLQEYSRAYLGSLGSGV---- 293

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    +  + + LVI+ +   ++ 
Sbjct: 294 ------DLIIFGLLIVLVIIKQPRGIMG 315


>gi|209550638|ref|YP_002282555.1| urea ABC transporter permease UrtB [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209536394|gb|ACI56329.1| urea ABC transporter, permease protein UrtB [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 550

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 93/297 (31%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       IGAY+  ++      +   +   S   +     +  
Sbjct: 271 AAIGLAITFGVMGVINMAHGEMVMIGAYTTYVVQEYITSAFPGVADYSLAFAVPAAFVFT 330

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       +   +     + +L  W      +  +              S +    
Sbjct: 331 GFVGLVIERA--VIRYLYGRPLETLLATWGVSLILQQAVRSIFGPTNREVRNPSWMSGV- 387

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++++    +   ++L L+R+A     R +  N++   S+     +  
Sbjct: 388 FDLGGLSITWNRLWIIVFSMVVFVMLLLLLKRSAFGLQMRAVTQNRRMASSMGIRTGWVD 447

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              FA+ S   G+AG   A S+          S  I    +V+ GG+ +L         L
Sbjct: 448 AFTFALGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGALSL 505

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             V +                          L+++ + L I  R   L  L+  +  
Sbjct: 506 GVVNKFLEPFAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 549


>gi|117923802|ref|YP_864419.1| inner-membrane translocator [Magnetococcus sp. MC-1]
 gi|117607558|gb|ABK43013.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Magnetococcus sp. MC-1]
          Length = 424

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 103/344 (29%), Positives = 164/344 (47%), Gaps = 26/344 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V   L+          KY  ++ I  LIY++   GL+IVVG  GLL L  V  YA+GA
Sbjct: 93  ILVVLTLMVAMALPFLLSKYWLNVAILALIYILLGLGLNIVVGLAGLLDLGFVAFYAVGA 152

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           YSY +     GLS W  IP +A+++ + G ++G P L+  GDYLAI TL   EI + +L 
Sbjct: 153 YSYALGAEYLGLSFWQAIPFAALLAASFGAVLGFPVLRMHGDYLAIVTLGFGEIIRLVLN 212

Query: 139 KWKPITNGKAGIYVADRLYFLG-----------TTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            W  +T G  G+       F                  L ++     S     +F+Y  L
Sbjct: 213 NWISLTGGPNGLRTPLPTLFGMEFTKRATQGGTPYHEVLGQWMEIDYSRAARYVFIYVTL 272

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +  L   ++  L+R  I  AW  +R+++ A  SL    +  KLSAF++ +   G+ G 
Sbjct: 273 LVVVTLLVYMVQRLKRMPIGRAWEALREDEIACRSLGINHVMVKLSAFSMGAMVGGVGGV 332

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
           FFAAS+  ++P  F F E+ ++++IV+LGG+ S+  +  A  +L  + EL      Y   
Sbjct: 333 FFAASQGFVNPASFTFFESALILAIVVLGGLGSVVGVIVAAVVLTVLPELLRDFTEY--- 389

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                          +   A+ ++++ R   LLR+  P   +E+
Sbjct: 390 ------------RVLIFGCAMVVMMVWRPRGLLRIHRPEFVVEK 421


>gi|254500366|ref|ZP_05112517.1| amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222436437|gb|EEE43116.1| amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 539

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 89/297 (29%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       IGAY   ++      S   L   S  I+        
Sbjct: 260 AAIGLAITFGVMGVINMAHGEMVMIGAYVTFVVQELIRTSAPGLFDYSLFIALPLAFATS 319

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                  G    +   +     + +L  W      +  +                     
Sbjct: 320 GLIGI--GIERGVIRWLYGRPLETLLATWGISLILQQAVRSIFGPTNREVGNPDW-MSGA 376

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       +++L    + A +IL L++T      R +  N++   S+     +  
Sbjct: 377 FEIGQMTVTYNRMWIILFALLVFAGLILVLKKTPFGLYTRAVTQNRRMAASMGIRTPWVD 436

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   A S+             I    +V+ GG+ +L         L
Sbjct: 437 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLVGAMTL 494

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             V +                          L+++ + L I  R   L  L+  +  
Sbjct: 495 GVVNKFLEPYAGAVLAK-------------ILVLVFIILFIQKRPRGLFALKGRAVE 538


>gi|330836846|ref|YP_004411487.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Spirochaeta coccoides DSM 17374]
 gi|329748749|gb|AEC02105.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Spirochaeta coccoides DSM 17374]
          Length = 368

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 72/357 (20%), Positives = 138/357 (38%), Gaps = 44/357 (12%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
             KIL  +  +   L+FL +  +    +   +     IYV+ A  ++++ G  G  SL  
Sbjct: 15  RKKILPTVGAIAVFLVFLAIAPSILGAFELRIFNLCGIYVVLALSMNLINGFTGQFSLGH 74

Query: 71  VIAYAIGAYSYVILGSRY-------------------GLSIWLLIPVSAMISGACGMIMG 111
               A+GAY   +L                        +   + + ++ +++     ++G
Sbjct: 75  AGFMAVGAYVSALLTMSPATKSAVYYLKPIVPFLATVQVPFTVALVMAGLVTALVAALIG 134

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
            P L+ + DYLAIATL  SEI + +    + ITNG  G+    R                
Sbjct: 135 APVLRLKDDYLAIATLGFSEIIRVVFTNLQSITNGSLGLKNIPR---------------- 178

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                        +   G      + ++ L + +   A++ IRD++ A  ++   +   K
Sbjct: 179 ---------YTTIWWAWGTALFVIAFMVLLIKGSYGRAFKAIRDDEIAAEAMGVNLFSHK 229

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           L+AF + + F G+ GA        I P+M+K S    ++ IV+LGG+ S++    +   +
Sbjct: 230 LAAFMIGAFFAGVGGALMGNQLGAIDPNMYKISLTYNILLIVVLGGIGSITGSVISAMAV 289

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             ++EL   ++       L            +    L  +IL     ++  +  S  
Sbjct: 290 TILMELLRPLDESMNVFGLFIIPGIPGMRMVVFSAILMSIILFYQRGIMGNKEFSWE 346


>gi|329937724|ref|ZP_08287243.1| branched-chain amino acid ABC transport permease [Streptomyces
           griseoaurantiacus M045]
 gi|329303123|gb|EGG47011.1| branched-chain amino acid ABC transport permease [Streptomyces
           griseoaurantiacus M045]
          Length = 385

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 66/314 (21%), Positives = 123/314 (39%), Gaps = 7/314 (2%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 +   +G+      + A GLS++ G+ G LSL      A+GAY YV L    G  
Sbjct: 31  PFYLDAFWLRLGLFCTAAAIGAVGLSLLTGTAGQLSLGHAFFLAVGAYGYVWLAGEPGPG 90

Query: 92  IWLLIPVSAMISGACGMIMGL--PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +   + +   ++ A    +     + + RG YL +ATL +  +  ++L+    +T G  G
Sbjct: 91  LPPPLALVLAVALAGLAGLLFGPVAGRVRGIYLGVATLALVFLGHHLLLAAGTVTGGFNG 150

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                 + F G    +              E  ++Y+ L +   S      L R     A
Sbjct: 151 RS-VPPMAFGGFAFTAQEPELLVLGVPFGAEERLWYLGLALFAGSWYTARNLLRGRPGRA 209

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              +RD++ A   L   +   + +AF VSS + G+AG   A +  R+ PD F  + ++  
Sbjct: 210 LVALRDSETAASVLGVAVARHRSAAFVVSSMYAGLAGVLLALAFRRVVPDYFGLALSVDY 269

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY----FNSLLKFDCSFNMRHTTLMV 325
           ++++++GG+ S++        +  +  L      +          +           L  
Sbjct: 270 LAMIVIGGLGSVAGATAGACFVTALPLLMARYADHLPFLAAPGTTEGGLGPTEAARYLYG 329

Query: 326 IALFLVILMRSHSL 339
            A+ LV+L     L
Sbjct: 330 AAVVLVLLRAPDGL 343


>gi|119382808|ref|YP_913864.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119372575|gb|ABL68168.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 368

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 80/351 (22%), Positives = 143/351 (40%), Gaps = 21/351 (5%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++L+++     L       + FL +       + +++ +  LIY + A GL+I+ G  
Sbjct: 30  FPIKLDRWGYYAILA------VAFLVVPLVIDSYWANAVLVPFLIYAIAALGLNILTGYA 83

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +  G+ I + I ++  I+   GM+ GLPSL+ +G YL
Sbjct: 84  GQVSLGTGGFMAVGAYAVYKLMVAFPGVPIVVHIILAGAITAVVGMLFGLPSLRIKGFYL 143

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  K     N                            +        
Sbjct: 144 AVATLAAQFFLVWLFNKVPWFYNYS---------ASGQINAPERTILGWAVTGPATSASA 194

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y + L      A +   L R ++   W  IRD   A   +    + AKLSAFAVSS F+
Sbjct: 195 KYLICLCFAVGLAWMARNLTRGSVGRKWMAIRDMDIAAEIIGVNPLTAKLSAFAVSSFFV 254

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G+AGA   +     +   + F  +++ +V+ ++I+GG+ S+       A L+ +  L   
Sbjct: 255 GIAGALLFSVYLGAAEASEAFGINKSFLVLFMIIIGGLGSIFGSFAGAAFLVLLPVLLKN 314

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +    F                ++   +   +++  H L RL   +    R
Sbjct: 315 VLVAQFGWPTDLA---AHIELMIVGALIVFFLIVEPHGLARLWALTKEKLR 362


>gi|315641260|ref|ZP_07896337.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Enterococcus italicus DSM
           15952]
 gi|315483027|gb|EFU73546.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Enterococcus italicus DSM
           15952]
          Length = 326

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 73/341 (21%), Positives = 137/341 (40%), Gaps = 42/341 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           KY+    LL +V    LF          + D++ + I I ++ A  L++++G  G  SL 
Sbjct: 6   KYNLTWLLLTLVIYFGLFGLYNGGFINIFTDAIIVNIGINIILAVSLNLIIGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+ +         L I V  +I+G    ++G P+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYASAIITTKNPTFGGFLLAIIVGMIIAGVVAFVVGTPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + +++    +TNG +GI+                                  ++
Sbjct: 126 GISEIIRILIVNNSWLTNGPSGIFGIPEFSNWQ-------------------------LV 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                L+   +     +    A  ++R+++ A  S+       K+ AF        +AG 
Sbjct: 161 FIFAVLTVVFVSNFINSGGGRATLSVREDEIAAESMGVNTTKFKVIAFVFGGMLASLAGT 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A+ +  + P  + F+++I ++ I + GG+ S +    A  +L  +             
Sbjct: 221 LYASYQQSVFPSDYTFNKSIDILIIAVFGGLGSTTGSVLAAIVLGVLNMYLQ-------- 272

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                   F      +  +AL  +++ +   LL     S  
Sbjct: 273 -------DFGSLRMIIYALALIGIMIFKPSGLLGTWEFSIK 306


>gi|147676410|ref|YP_001210625.1| ABC-type branched-chain amino acid transport system, permease
           component [Pelotomaculum thermopropionicum SI]
 gi|146272507|dbj|BAF58256.1| ABC-type branched-chain amino acid transport system, permease
           component [Pelotomaculum thermopropionicum SI]
          Length = 341

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 66/344 (19%), Positives = 121/344 (35%), Gaps = 36/344 (10%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           ++    L LLA      + +   +     Y   +  Q LI  + A GL I+ G  G  SL
Sbjct: 9   SRQTAALLLLAAAIYTAVKILALSGLLTPYWLLVLDQALITTIGALGLCIIYGFAGQFSL 68

Query: 69  NCVIAYAIGAYSYVILGSRYGL----SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
                Y +GAY+   +    G          +P   + +     ++GLP L+ R DYL I
Sbjct: 69  GHAAFYGLGAYTAGTISKLLGHGSLAWFIAALPAGMLAAALVAFLIGLPILRLRSDYLGI 128

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           ATL    I +  +     +                                  + ++  +
Sbjct: 129 ATLGFGIIVKVGMDNSNKLF----------------------PVLGGATGMAGLPQVATF 166

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +     +S  ++     ++   + + IRD++ A   +      +K+ AF    A  G+
Sbjct: 167 DFIFLFAVISVLLVRNFIHSSYGRSCKAIRDDEIAADIMGIDTTRSKVLAFVFGCALAGL 226

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA +A     I P  F F ++   + IV+LGG+ S++         + ++E    +   
Sbjct: 227 AGALYAHRYPFIHPSSFDFLKSFDFLLIVVLGGLGSMTGTVITAIGWVFLLEGLRFV--- 283

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                      F      +  + L + IL R   +   +    F
Sbjct: 284 -------LGQQFIEFRGVIYALILVITILSRPQGIFGGKELGIF 320


>gi|295110633|emb|CBL24586.1| ABC-type branched-chain amino acid transport system, permease
           component [Ruminococcus obeum A2-162]
          Length = 332

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 72/321 (22%), Positives = 132/321 (41%), Gaps = 26/321 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L++FL + A  +  YI S  +  + +   A   +I+ G  G +S       A+GAY+ 
Sbjct: 14  VLLVIFLLIPAVTTGNYIISNLVNCMFFAAMAGCWNIIGGYGGQVSWCHASFVAVGAYAN 73

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            IL + +G S +L IPV  +I+     I+G  + +  G Y +IAT+   E  + ++  + 
Sbjct: 74  FILNTEFGWSPFLTIPVGMVIAAIIATIVGYSTFRLHGPYFSIATIACGEAIRVLIQHFD 133

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G AG+YV  R +                       I  YY+ L +  L   +    
Sbjct: 134 KVTKGAAGMYVTYRQHDFWLLTFEND-------------IPFYYIALVLVLLMVLVTYLF 180

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            ++        I+ ++ A  SL       KL AF +S+    + G F+A+    I+P   
Sbjct: 181 TKSKTGYYLSAIKGDETAAESLGIETFKIKLKAFQLSAMMAAVVGCFYASFLTYIAPTST 240

Query: 262 -KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
             F  ++ +  + I+GG+ SL        +++ ++E    +      S            
Sbjct: 241 ASFDLSMKIGVVAIVGGVASLWGSVIGGFVVVLLIEATSVLFGSAGGS------------ 288

Query: 321 TTLMVIALFLVILMRSHSLLR 341
             +  I L LVI+ +   ++ 
Sbjct: 289 QMVYGILLMLVIIFKPEGIIG 309


>gi|116751484|ref|YP_848171.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
 gi|116700548|gb|ABK19736.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
          Length = 327

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 77/335 (22%), Positives = 143/335 (42%), Gaps = 28/335 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +N+ + +  L A ++  +    +   K+  +   + +   I+ + + GLS+++G  G +S
Sbjct: 1   MNRREWLGFLCAALFIGVFPWVVVPFKAVSHYVDVMVFAGIFSLVSLGLSMLMGFAGQIS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           +     + IGAY+  IL SR+G +    +P+  + S A   ++G+P+L+ +G YLA+ATL
Sbjct: 61  MAQAAFFGIGAYTSGILTSRFGWNPVPAMPIGMLASAAVAWLIGIPALRLKGHYLAMATL 120

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I   +L +    T G +G+    RL F    +                 I  YY++
Sbjct: 121 GFGVIVHIVLGEEVAWTGGPSGMSDIPRLRFGDVRITGE--------------IAWYYIV 166

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
               F+       + R+ +  A R I + + A  S+       KL  F +S+ F  +AG+
Sbjct: 167 WVTVFIGLVFCFHILRSRVGRALRAIHEEETAAESMGVPTARYKLQVFVLSAVFAALAGS 226

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
           F+      ++P  F    +I  + +V++GGM SL      T +L  V             
Sbjct: 227 FYTHYVTCLNPGSFNLMWSIRFVLMVMVGGMQSLWGAIVGTVLLTFVGN----------- 275

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              ++   F      +    L +V L     L+ L
Sbjct: 276 ---EWLQVFADFEIVIYGAILLVVALFLPGGLMSL 307


>gi|224418043|ref|ZP_03656049.1| ABC transporter permease [Helicobacter canadensis MIT 98-5491]
 gi|253827374|ref|ZP_04870259.1| ABC transporter, permease protein [Helicobacter canadensis MIT
           98-5491]
 gi|313141581|ref|ZP_07803774.1| abc transport system permease protein [Helicobacter canadensis MIT
           98-5491]
 gi|253510780|gb|EES89439.1| ABC transporter, permease protein [Helicobacter canadensis MIT
           98-5491]
 gi|313130612|gb|EFR48229.1| abc transport system permease protein [Helicobacter canadensis MIT
           98-5491]
          Length = 399

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 67/371 (18%), Positives = 132/371 (35%), Gaps = 38/371 (10%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             +   +++ LFL       Y+  +   ILI+++ A   +++ G  G LSL      AIG
Sbjct: 21  FLLYIGVIIVLFLAQCFLNDYVLRIFNNILIFIILAVSYNLINGVTGQLSLEPNGFVAIG 80

Query: 78  AYSYVIL-------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           AY   ++                          +   +  S +++    +++  P  + R
Sbjct: 81  AYITALMLLDEDSKLGMFDLADPHPFILSMNSELLPALLCSGLVAAFIAILLAFPVFRVR 140

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV- 177
           GDYLAI TL    I + + I     TNG  G+                +      S  + 
Sbjct: 141 GDYLAIVTLGFGFIIKILAINNPEWTNGAIGLNEIPNNADSVVGGLRNLMQGWIASPSLP 200

Query: 178 -----------------IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                              +I + +    +   +  +IL +  +    A + +RD++ A 
Sbjct: 201 EFLKESLAFIYKHSFENGADITVLFWSGILAAAAVILILQVVSSKYGRAMKAVRDDEDAA 260

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++       K  AF+ S+   G+ G   A     I P +F F     ++ I++LGG+ S
Sbjct: 261 IAMGINTFKIKTFAFSTSAFLEGVGGGLMAVLLTTIDPKIFGFELTFQLLIIIVLGGLGS 320

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
            S       ++IG  E    ++         F  ++         + L +++L     ++
Sbjct: 321 TSGAILGAILVIGGGEWLRFLDQPLVFFGTDFG-TYPGLRMVFFSLILLIIMLFAREGIM 379

Query: 341 RLRTPSNFLER 351
             +   +   R
Sbjct: 380 GKKEIWDLKPR 390


>gi|224371730|ref|YP_002605894.1| ABC-type branched-chain amino acid transport-system, ATP-binding
           protein [Desulfobacterium autotrophicum HRM2]
 gi|223694447|gb|ACN17730.1| ABC-type branched-chain amino acid transport-system, ATP-binding
           protein [Desulfobacterium autotrophicum HRM2]
          Length = 321

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 72/318 (22%), Positives = 128/318 (40%), Gaps = 29/318 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             +L  + +GA     Y+  +   I I  + A GL++++G  G +SL     Y IGAY+ 
Sbjct: 17  LFVLAVILMGAMVENTYLLQIMTFIGINTLLALGLNMLMGYAGQVSLGQGAFYGIGAYAT 76

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            IL   +G+S WL +  +  ++     ++G P+L+  G YL + TL    I      +  
Sbjct: 77  AILSGTHGVSPWLALVFAIALAVGVAWVVGRPTLRLSGYYLGMGTLGFGMIVHIFFREAG 136

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G +G      L                           +Y++  + F +  +   +
Sbjct: 137 SLTGGASGFVGIPMLGIGSFMFEG--------------GRSYFYLVWAVVFGTMLVCRRI 182

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +    A   I   + A  +L       KL+ F  S+A   MAG F+A     ISPD F
Sbjct: 183 IDSKTGRALAAIHGRENAAVALGVDAHSVKLTIFMFSAALGAMAGFFYAHFVLFISPDSF 242

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F  +I ++++V++GGM S+       A++  + E+  G   Y                 
Sbjct: 243 GFMASIKMVTMVVIGGMASVWGAVLGAAVITLLPEVLHGFADY---------------EM 287

Query: 322 TLMVIALFLVILMRSHSL 339
            +  + L  V+++    L
Sbjct: 288 IVFGVILMGVMIVMPQGL 305


>gi|125718526|ref|YP_001035659.1| branched-chain amino acid ABC transporter permease [Streptococcus
           sanguinis SK36]
 gi|125498443|gb|ABN45109.1| ABC transporter membrane-spanning permease-branched chain amino
           acid transport, putative [Streptococcus sanguinis SK36]
          Length = 317

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 81/340 (23%), Positives = 147/340 (43%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     L ++  LL+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNIFWLGLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  S    + ++ +   A+I+G   + +GLP+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLAGAIIAGIVALTVGLPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + ++I    +TNG AGI                                    +
Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++  + L   R+ I  +  ++R+++ A  S+       K++AF + +    +AG+
Sbjct: 161 YVFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F+  I ++ IV+ GG+ S++    A  +L  +  L   +      
Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGVLNMLLQDV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                    +     +  +AL LV++ R   LL     S 
Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305


>gi|313898220|ref|ZP_07831758.1| branched-chain amino acid ABC transporter, permease protein
           [Clostridium sp. HGF2]
 gi|312956984|gb|EFR38614.1| branched-chain amino acid ABC transporter, permease protein
           [Clostridium sp. HGF2]
          Length = 319

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 71/341 (20%), Positives = 135/341 (39%), Gaps = 43/341 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            +K +    L       ++ L +       Y  S    I I ++ A  L++++G  G  S
Sbjct: 5   FSKLNLCWILFTTALLTIITLLMQGGVINFYYQSTLYTIGINIILAISLNLIIGVTGQFS 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGL--SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           L       IGAY+  I+           L + +  +IS    +++ +P+L+ +GDYLAIA
Sbjct: 65  LGHAGFMCIGAYAAAIITKATPNLGGFALAVVIGGVISALVALVVAIPTLRLKGDYLAIA 124

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL  SEI + I++                                     F I ++  + 
Sbjct: 125 TLGFSEIVRIIVLNMTITNGAA--------------------------GLFGIPKLTTWP 158

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +LL    +S  I+L   R+A   A  +IR+++ A  ++       K  AF + +    +A
Sbjct: 159 LLLFCLIVSLLIVLNFSRSAPGRACISIREDEIASEAMGINTTKYKTIAFVIGAVLASLA 218

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA +A +   + PD+F F++++ ++ +V+ GGM S +    A  ++  +           
Sbjct: 219 GALYACNFYVVKPDLFTFNKSVDILILVVFGGMGSFTGSIVAAVVIGFINMYLQNFAD-- 276

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                            +   AL L+++ R   L   +  +
Sbjct: 277 -------------VRMIIYGAALVLIMVFRPEGLFGTKEFT 304


>gi|39934819|ref|NP_947095.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009]
 gi|39648669|emb|CAE27191.1| putative branched-chain amino acid transport system permease
           protein [Rhodopseudomonas palustris CGA009]
          Length = 328

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 70/327 (21%), Positives = 127/327 (38%), Gaps = 24/327 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L+                   Y+ ++ +  L+Y   + G +I+ G  G +SL   + + +
Sbjct: 13  LIVAALLAAAAACAPLFIKDVYVQNIMVLTLMYAALSQGWNILGGYCGQISLGHALYFGL 72

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +L ++ G+  W  +    +IS    + +G P+ + RG Y  IAT++++EI   +
Sbjct: 73  GAYTTALLFTKLGVLPWFGMIGGGIISSVIALALGYPTFRLRGHYFVIATIVIAEIGFLL 132

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
              W                 +                     ++  YY  L  C L+  
Sbjct: 133 FHNWDWAGAALGIDIPVRGDSWAKFQFTR-------------SKLPYYYFALVFCCLAWL 179

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           I  WL  +     WR ++DN  A  SL   +  +K+ A AVS+    + G+F+A     I
Sbjct: 180 ITWWLEDSKWGYWWRAVKDNPDAAESLGVVVFNSKMGAAAVSAFLTAVGGSFYAMFVSYI 239

Query: 257 SPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            P+    F  ++++    +LGG+ +L       AILI + EL           +      
Sbjct: 240 DPESVMTFQFSLLMALPAVLGGIGTLWGPVLGAAILIPLTELTRSFVGGSGRGV------ 293

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                  L    + ++ L R   L+ L
Sbjct: 294 ----DLILYGSVIVMIALARPEGLIGL 316


>gi|71907977|ref|YP_285564.1| inner-membrane translocator [Dechloromonas aromatica RCB]
 gi|71847598|gb|AAZ47094.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Dechloromonas aromatica RCB]
          Length = 348

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 70/309 (22%), Positives = 130/309 (42%), Gaps = 16/309 (5%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                  Y   +   + I +  A GL+I+ G  GL+SL       +GAY+  IL  R+G 
Sbjct: 36  FPFVVDDYWLYLACLVAINIASATGLNILTGYTGLVSLGQAAFMGLGAYTVAILEQRFGT 95

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              L +     ++   G+++G+PSL+ +G YLAI+T+  S I   +   W  +T G  G+
Sbjct: 96  PAVLNLVAGGAVAMLVGVVVGIPSLRVKGLYLAISTIAASFILHFVFANWSSLTGGTGGM 155

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            V                   F    +     +Y++++ +          L RT I  A+
Sbjct: 156 TVPPA---------------NFFGIPLDTSFRLYWLIVPVALTMLVCAANLFRTRIGRAF 200

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             IRD   +   L   ++  KL++FA+SS + G+AG  +A     ++P+ F    +I  +
Sbjct: 201 IAIRDRDISAEVLGIPLLRYKLTSFALSSFYAGVAGGLWAYFFRVVTPESFPLMMSIFFL 260

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           + VI+GGM ++         +  V E+   +   +     +     +   T +  + +  
Sbjct: 261 AAVIVGGMGTILGGILGAIFMTMVPEVLK-LIVGWLPLGSEGAVILSPVRTIVFGLLIVG 319

Query: 331 VILMRSHSL 339
            ++     L
Sbjct: 320 FLIFEPLGL 328


>gi|55980554|ref|YP_143851.1| branched-chain amino acid ABC transporter permease [Thermus
           thermophilus HB8]
 gi|55771967|dbj|BAD70408.1| branched-chain amino acid ABC transporter, permease protein
           [Thermus thermophilus HB8]
          Length = 355

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 62/306 (20%), Positives = 113/306 (36%), Gaps = 21/306 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y   +   + I  + A GL ++VG  G +SL       +GAY+   L         LL 
Sbjct: 56  PYPMYVATLVAIGALSALGLHLLVGGAGQISLGHAAFMGVGAYAASHLTGPLAPLGILLG 115

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A + G    +  L   + +G YLAIATL    +   +   W+ +T G  G  +    
Sbjct: 116 GGIAALLGLLLGLPSL---RIKGVYLAIATLAFQFLADYVFKTWEAVTGGIRGRTLPPPE 172

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                               +     ++Y++L            L  T    A+R +RDN
Sbjct: 173 ---------------VLGLVLDTPEKLWYLVLLFALPLFFYGKRLLMTRAGRAFRAVRDN 217

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             +       +   KL AFA+S+ + G+AG   A     ++P+ F  S +I  +++VI+G
Sbjct: 218 DLSARVAGVDLTRTKLLAFALSAFYAGVAGGLLAGLYKAVTPEYFPLSVSIQYLAMVIVG 277

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  ++         ++ + E+              +          +    + L +++  
Sbjct: 278 GAGTVLGAVLGAFFVLLIPEVLNSFVGALGPE---YAAQLAAWRNVVFGGLILLFLVLEP 334

Query: 337 HSLLRL 342
             L+ L
Sbjct: 335 LGLVGL 340


>gi|296272922|ref|YP_003655553.1| inner-membrane translocator [Arcobacter nitrofigilis DSM 7299]
 gi|296097096|gb|ADG93046.1| inner-membrane translocator [Arcobacter nitrofigilis DSM 7299]
          Length = 346

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 70/356 (19%), Positives = 132/356 (37%), Gaps = 45/356 (12%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L ++   + F +       +Y   +   + I+++ A   +++ G  G  SL      
Sbjct: 12  IINLGIIITAIWFTWFAQQVFDEYTVRIINNVAIFIILAVSYNLINGVTGQFSLEPNGFV 71

Query: 75  AIGAYSYVI-------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           AIGAY   I                          + +  + +S +IS    + +  P  
Sbjct: 72  AIGAYVTAILLVDKEGMLYQYDISDPYPWVLALQTNFFWALILSGIISALLALSLSFPVF 131

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
           + RGDYLAI TL    I + + I    ITNG  GI    +                    
Sbjct: 132 RVRGDYLAIVTLGFGFIIRILAINSPEITNGSLGINDIPQFSN----------------- 174

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                    Y   G+   +   IL +  +    A + +RD++ A  ++       K  AF
Sbjct: 175 --------LYWTGGVAIFAVLAILNIIYSKYGRAMKAVRDDEDAASAMGINTFKVKTLAF 226

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
             S+ F G+ G   AA    ISPD+F F     ++ I+++GG+ S +     T +++  +
Sbjct: 227 TTSAFFEGVGGGLLAALLTSISPDLFTFFFTFQLLIIIVIGGLGSTTGAIIGTVMVMAGL 286

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           E    ++    N +     +       +  + L +V+L     L+  +   +  ++
Sbjct: 287 EWMRFLDEP-INFMGIHTDALPGMRMVVFALILIVVMLFAREGLMGKKELKDLFKK 341


>gi|311104567|ref|YP_003977420.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310759256|gb|ADP14705.1| inner-membrane translocator 18 [Achromobacter xylosoxidans A8]
          Length = 337

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 71/324 (21%), Positives = 129/324 (39%), Gaps = 25/324 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
            A +  L +   L      +Y+ S+G   L+Y   A   +I+ G  G LSL     + +G
Sbjct: 10  AAAIAALGVLALLPLASGNQYLLSVGAMTLLYAYLALSWNILGGIAGQLSLGHAAYFGLG 69

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+   L    G+S WL +   A+++    +++GL  L+ RG Y A+AT+    + + ++
Sbjct: 70  AYTSTWLFVNLGISPWLGMWAGAVVAMGAALVVGLSCLQLRGAYFALATIASCMVLKTLV 129

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                +  G  G+ V            +              + F Y V L     +  +
Sbjct: 130 ENADTLLGGPRGMEVTLLRDAPLYFQHTG-------------KAFYYLVALAFTVAALLV 176

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              + R+        +R++Q A  +L   +   KL+A  +S+A   + G F+A     IS
Sbjct: 177 NRHVLRSRFGYCLTAVRNDQDAAMALGVPVRRYKLTAAMLSAAMTALGGTFYAQFVLYIS 236

Query: 258 PDMFKFSENIIVISIV-ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           PD    +   ++I++V I+GG  +L        +L+   EL   +               
Sbjct: 237 PDKVFGANLSVIIAVVCIIGGRGTLWGPVLGALLLLPGEELARSLTGGMVG--------- 287

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
                 L  + L +VI +    L+
Sbjct: 288 --ADMMLYGLLLMIVIRLEPRGLM 309


>gi|86158603|ref|YP_465388.1| chain amino acid ABC transporter fused ATPase and inner-membrane
           subunits [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775114|gb|ABC81951.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter ATP-binding protein 1,
           HAAT family [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 652

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 60/289 (20%), Positives = 115/289 (39%), Gaps = 16/289 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              +L   A V    L   +       Y   +   + IY +   GL + VG LG ++L  
Sbjct: 3   RRLLLVRGAEVVLFALLAAVPLAVHNPYALGLLTLLAIYGILLIGLDVTVGYLGQVNLAH 62

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +GAY+  I  ++ GL +  ++ ++  ++   G ++ LPSL+  G   A+ATL   
Sbjct: 63  AAFLGLGAYTAGIAVTKLGLGLVPVLLLAPTVAFVIGALLALPSLRLEGPQFALATLSFL 122

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +    L + + +T G  G+ +                         +     Y++ + +
Sbjct: 123 ALTTTALNELEWLTAGAQGLSLDRPPLLGHE----------------LSPRDFYWLCMLL 166

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                  +  L  +    A+  +RD+  A  ++       K++AFA  S   G+AGA +A
Sbjct: 167 LACVWVAMRNLLSSQWGRAFEALRDSPIATDAMGVGTYRHKVAAFAFGSGLGGLAGALYA 226

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            + + + P  F +   I ++  V+LGG  SL        ++  +  L  
Sbjct: 227 FNFEYLQPQSFVYELTITLLLGVVLGGRKSLWGAFVGATLVALLPNLLS 275


>gi|312879766|ref|ZP_07739566.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Aminomonas paucivorans DSM 12260]
 gi|310783057|gb|EFQ23455.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Aminomonas paucivorans DSM 12260]
          Length = 353

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 69/335 (20%), Positives = 126/335 (37%), Gaps = 45/335 (13%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV------ 82
           +        Y   +   I I  + A  L+++ G  G+ SL      A+GAY+        
Sbjct: 22  WWAEGNLDGYKIQVLNLIAINAILAVSLNLIYGFTGMFSLGHAGFMAVGAYTCALLILPP 81

Query: 83  -------------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                           S      ++ +    +++G   + + +P L+  GDYL IA+L  
Sbjct: 82  IQKEMIYILEPLIWPFSALHAPFFVAVLAGGIMAGVFSLFIAMPVLRLGGDYLGIASLGF 141

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +EI + +     PITNG  GI                             +    +   G
Sbjct: 142 AEIIRVVFTNATPITNGALGIKGIP-------------------------DYANLWWNWG 176

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
            C L+  +I+ L ++   N  + IRD++ A  ++       ++ +F V + F G+ GA  
Sbjct: 177 WCVLTLYVIVRLLKSNFGNCLKAIRDDEVAARAMGIDTFRYRVISFVVGAFFAGVGGALM 236

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +    I P MF F     V+ IV+ GG+ S++     + ++  ++E    +        
Sbjct: 237 GSLITTIDPKMFTFLLTFNVLMIVVAGGLGSITGSVLGSVVITVLLEWLRFVENPIDLGS 296

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           L            +  +AL L+IL R   ++  R 
Sbjct: 297 LHIP-GIPGMRMVIFSLALLLIILFRREGIMGQRE 330


>gi|257056302|ref|YP_003134134.1| ABC-type branched-chain amino acid transport system, permease
           component [Saccharomonospora viridis DSM 43017]
 gi|256586174|gb|ACU97307.1| ABC-type branched-chain amino acid transport system, permease
           component [Saccharomonospora viridis DSM 43017]
          Length = 356

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 59/291 (20%), Positives = 123/291 (42%), Gaps = 8/291 (2%)

Query: 55  GLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
           GL+++ G  G +SL      A+GAY+  +L     L   +++  +  ++   G+++G  +
Sbjct: 62  GLTVLTGLNGQISLGHGALMAVGAYTTALLLRDDDLPFGVVMLAATTLTALVGIVVGAAA 121

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
            + +G YL  ATL ++     + + +  +  G+ G+ V                 F    
Sbjct: 122 ARLKGPYLVGATLALAVGLPGLAVHFDGVLGGEQGLPVNTPRPAQWF----DDAMFFITG 177

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
           S + ++ F+ YV  G   L   ++  L        WR +RD++ A       +  A++ A
Sbjct: 178 SELGHQKFLAYVAWGTLLLVLLLLANLVAGRYGRVWRAVRDDEVAAALAGIHLGRARILA 237

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F VS+A  G+AG+  A      +P  F    ++ +++ V++GG+ SL+     +A+L+ +
Sbjct: 238 FVVSAACAGLAGSVLAMVVRLTAPSGFTIVLSLSLLTAVVVGGLGSLTGAVLGSALLVFL 297

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                 +      + ++           +  I L   +L     ++ L   
Sbjct: 298 PPAVTDLGTELGLTAVRAAQLAP----LVYGIVLVAAMLAAPSGVVGLGRR 344


>gi|226364372|ref|YP_002782154.1| branched-chain amino acid ABC transporter permease/ATP-binding
           protein [Rhodococcus opacus B4]
 gi|226242861|dbj|BAH53209.1| putative branched-chain amino acid ABC transporter
           permease/ATP-binding protein [Rhodococcus opacus B4]
          Length = 607

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 65/292 (22%), Positives = 120/292 (41%), Gaps = 15/292 (5%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +   L+ LFL        +        I  +   GL++ +G  G L+L     YA GAY+
Sbjct: 17  LAVGLVVLFLPEFGLGFALSRQVQLACILALVVSGLNLSLGYAGELALGQAAMYAAGAYT 76

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +L       I L +  S +++ A G++ G+P L+     LA+ +  +  +  +I+  +
Sbjct: 77  AGLLSIAGHTDIVLQLAASGLVALAVGIVTGIPGLRLGSWSLAMTSFFLVLLVPDIIAVF 136

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
              T G+ G+   +     G  + +                  Y V++ +  L  +++  
Sbjct: 137 GDTTGGRNGLSGIEPATLFGEAIDADR---------------FYTVVVIVAILWFAVLRN 181

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  +    A+RT++ +     S+  ++   KL  +A+ +   G+AGA FA     +SP+ 
Sbjct: 182 LVVSRHGIAFRTLKQSPVLASSVGISVFRMKLLGYAIGAFPAGLAGALFANIDMYVSPEA 241

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           F F+    V++  ILGG TS+   A   AI+            Y       F
Sbjct: 242 FGFTFATAVLAACILGGATSVYGAAVGAAIMQLGPNQSSEFQQYALVFYGGF 293


>gi|241206007|ref|YP_002977103.1| urea ABC transporter permease [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240859897|gb|ACS57564.1| urea ABC transporter, permease protein UrtB [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 545

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 95/297 (31%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       IGAY+  ++      +   L   S   +     +  
Sbjct: 266 AAIGLAITFGVMGVINMAHGEMVMIGAYTTYVVQEYITSAFPELADYSLAFAVPAAFVFT 325

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       +   +     + +L  W      +  +  +           + +    
Sbjct: 326 GFVGLVIERA--VIRYLYGRPLETLLATWGVSLILQQAVRSSFGPTNREVRNPTWMSGV- 382

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++++    +  +++L L+R+A     R +  N++   S+     +  
Sbjct: 383 FDLGGLSITWNRLWIIVFSMVVFVALLLLLKRSAFGLQMRAVTQNRRMASSMGIRTGWVD 442

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              FA+ S   G+AG   A S+          S  I    +V+ GG+ +L         L
Sbjct: 443 AFTFALGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGALSL 500

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             V +                          L+++ + L I  R   L  L+  +  
Sbjct: 501 GVVNKFLEPFAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 544


>gi|260655230|ref|ZP_05860718.1| branched-chain amino acid ABC transporter, permease protein
           [Jonquetella anthropi E3_33 E1]
 gi|260629678|gb|EEX47872.1| branched-chain amino acid ABC transporter, permease protein
           [Jonquetella anthropi E3_33 E1]
          Length = 348

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 65/340 (19%), Positives = 138/340 (40%), Gaps = 20/340 (5%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +   +       L ++  + L +     +   Y   +  Q  +  + + G+ ++   +G 
Sbjct: 1   MNKQRSTGKFAALLLILAVYLVVIPLVFRGHPYFLGVLTQASVLSVISAGVWLMF-YIGR 59

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           +++       IG Y+  IL  + GLS WL    +  ++ A  +I+GLP L+ +G Y ++ 
Sbjct: 60  INIGQGAFALIGGYTAAILMKKIGLSFWLASLGAVAVTVAAAVIVGLPLLRLKGVYFSMI 119

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL ++E  +     +  +TNG  GI        +     +LI       + V   +  YY
Sbjct: 120 TLCLTETARLAAQSFPSLTNGAKGILNIPMPGAVKLGDLTLIP----DFASVDKHLAYYY 175

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +   +     +++  +  + +    R++++N+    S    +   ++ AF + + F G+ 
Sbjct: 176 LGAVLLLFCFAVLYRVVHSRLGWLLRSLQENEDLASSFGVDVPRLRVIAFGICAVFAGLG 235

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G+FF   +  + P  F   ++   +    LGG+ S+      T +L    E   G+N Y 
Sbjct: 236 GSFFVTLQQCVYPATFTVQDSTYFLLYCFLGGLGSVWGALAGTFVLFLSFEALQGLNQY- 294

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                            +  + +  ++L   + LL LR P
Sbjct: 295 --------------QPLIYSLIMIGMMLWLPNGLLSLRLP 320


>gi|302386472|ref|YP_003822294.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
 gi|302197100|gb|ADL04671.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
          Length = 358

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 71/334 (21%), Positives = 144/334 (43%), Gaps = 24/334 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + I   + +   +++ L + A +    +  + + + IY + A  L++ VG LG LSL 
Sbjct: 16  KSNMITYGIVIAAFIMVQLLVNAGQVSSLMKGLLVPLCIYTIMAVSLNLTVGILGELSLG 75

Query: 70  CVIAYAIGAYSYVILGSRY-------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
                 +GA+S  +            G+  +  I + A  +   G+++G+P L+ RGDYL
Sbjct: 76  HAGFMCVGAFSSSLFSISMLEAIPNSGIRFFFAILIGAAFAALAGIVVGIPVLRLRGDYL 135

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           AI TL   EI +N++       +     +       L       +            +  
Sbjct: 136 AIVTLAFGEIIKNVINVIYIGKDADGLHFSMKNAMALNMEKDGTVILNGAQGITGTPKNS 195

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            + + + +  ++  I+L L  +    A  ++RDN+ A  S+   I   KL AF +S++  
Sbjct: 196 TFTIGVILILITLVIVLNLIHSRSGRAIMSVRDNRIAAESIGINITKYKLMAFTISASLA 255

Query: 243 GMAGAFFAASRD--RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G+AG  ++ +      +   F ++++I+++  V+LGG+ ++     A  IL  + EL  G
Sbjct: 256 GVAGVLYSHNLSALTATQKNFGYNQSIMILVFVVLGGIGNIRGSMIAAVILTLLPELLRG 315

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +N Y                  +  + L ++++ 
Sbjct: 316 LNTY---------------RMLIYAVILIVMMIF 334


>gi|17989219|ref|NP_541852.1| high-affinity branched-chain amino acid transport system permease
           protein LIVH / high-affinity branched-chain amino acid
           transport ATP-binding protein LIVG [Brucella melitensis
           bv. 1 str. 16M]
 gi|17985077|gb|AAL54116.1| high-affinity branched-chain amino acid transport system permease
           protein livh / high-affinity branched-chain amino acid
           transport ATP-binding protein livg [Brucella melitensis
           bv. 1 str. 16M]
          Length = 916

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 26/325 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A    L   L L    +  ++  + I I ++   +   +IV G  G +SL   + Y IG
Sbjct: 329 IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 388

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  ++    G+S W  + + A I+   GM++  P  + +G + ++A++   E+F+ + 
Sbjct: 389 GYT-GVILFNMGISPWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 447

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + +  +T G  G+ +  +L ++    R                     ++ GM  ++ +I
Sbjct: 448 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 493

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +RR+ +       R+ + A  +     +  +L A A+SSA   M G F A     I 
Sbjct: 494 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 553

Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P  MF  + +I +    ++GG+ +++       +L+ + E            L  F    
Sbjct: 554 PAAMFSLAFSIQIAMFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 609

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 +  + L LV+L   + ++ 
Sbjct: 610 ------VYGLVLILVVLFMPNGIMG 628



 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/294 (11%), Positives = 92/294 (31%), Gaps = 27/294 (9%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107
           + + A GL+++ G + +++         G +   ++ ++ GL  +  + +    +     
Sbjct: 27  FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 86

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +   L            A +  +      +I    +  G                  +  
Sbjct: 87  LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 135

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                    +       ++ LG   L  ++ L+L+ +   +A R +  ++ A   +   +
Sbjct: 136 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGHAIRAVAQHRSAAELMGVNV 195

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
               +  F + +A +G+A    A      S     F        +V+LGG+ S+      
Sbjct: 196 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 253

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             I+  +  +                   +     ++     L+++++   L  
Sbjct: 254 ALIIGVIDTMSGYYIG-------------SDLREAVVFGIFLLILILKPSGLFG 294


>gi|119386725|ref|YP_917780.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119377320|gb|ABL72084.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 639

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 96/309 (31%), Gaps = 20/309 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                   IY + A GL+I  G + ++++       +GAY+  +  +       L +  +
Sbjct: 350 LDALSLASIYFLAAIGLAITFGVMRVINMAHGEFIMMGAYTGYVAQTLIADRT-LSLVAA 408

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             ++ A     G+   +    +LA   L        + I  + +     G          
Sbjct: 409 LPLAFAVTFAAGVVLYRLVIRHLAHRPLETLLATFGVSIALQQLAKNIFGTQARP----- 463

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
             T  + +      +  V        + +         +  ++RT +    R +  N   
Sbjct: 464 -LTAPAWLEGAITVNDVVSISTIRVAIFVLALLFLGLFLFIMKRTRLGLEVRAVTQNPGM 522

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             S+        +  F + S   G+AG          S    ++         V++GG+ 
Sbjct: 523 AASMGINPDRIAMMTFGLGSGIAGIAGVAIGLFAQVTSELGQQYIVQS--FMTVVVGGVG 580

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           ++        ++  + ++    N            S  +   T M++ + + I  R   +
Sbjct: 581 NIWGTLAGAGLIGVLSKVIESFNP-----------SNTLAAQTFMILFIVIFIQFRPRGI 629

Query: 340 LRLRTPSNF 348
           +  R  +  
Sbjct: 630 IPQRGRAAE 638


>gi|264676230|ref|YP_003276136.1| inner-membrane translocator [Comamonas testosteroni CNB-2]
 gi|262206742|gb|ACY30840.1| inner-membrane translocator [Comamonas testosteroni CNB-2]
          Length = 364

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 68/335 (20%), Positives = 133/335 (39%), Gaps = 24/335 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +   +   + +   +   L         Y+  + ++I+I  +FA  L I+VG  GL+
Sbjct: 27  RPIRAKSVWVAVVLPLAVAALLAAAQPFWSAYLSDLVVKIMILSIFALSLHILVGGAGLV 86

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           SL     + +GAY+ V    + G +  +++  +  +SG   +++G  SL+ +G Y  + T
Sbjct: 87  SLGHAAYFGLGAYAAVKAAGQDGSNFLVMLGAAVGVSGLYALVVGALSLRTKGVYFIMVT 146

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L         ++       G  GIY+  R       + S                  Y+V
Sbjct: 147 LAF-AQLAFFVVHDVGYFGGSDGIYLMQRPATGALDMESSST--------------QYFV 191

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L    L  + I  LR +   +A   IR N++   +        KL+ F ++ A  G+AG
Sbjct: 192 VLAALVLVYAFIAMLRHSRFGHALAGIRVNEQRMRAAGFATYGYKLAGFVIAGALAGLAG 251

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
              AA    ++P++  +  +  V+ ++ILGG+ SL      T   + + EL         
Sbjct: 252 FLLAARDAVVNPELLAWHHSGEVLLMLILGGVGSLRGAVLGTITFVLLKELLST------ 305

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +        + I++  ++ +    L+ 
Sbjct: 306 ---HAIVGNAADHWQLTLGISIIALVALLPKGLVG 337


>gi|257870224|ref|ZP_05649877.1| branched-chain amino acid transporter [Enterococcus gallinarum EG2]
 gi|257804388|gb|EEV33210.1| branched-chain amino acid transporter [Enterococcus gallinarum EG2]
          Length = 328

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 76/341 (22%), Positives = 141/341 (41%), Gaps = 42/341 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           KY+     LA V    LF          + D++ + I I ++ A GL++++G  G  SL 
Sbjct: 9   KYNITWLALAAVIYFGLFAAYNGGLINLFSDAIIVNIGINIILAVGLNLIIGFSGQFSLG 68

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  IL +           + V   +SG   +++G+P+L+ +GDYLAIATL
Sbjct: 69  HAGFMAIGAYAGAILTANNPTFGGFLSGLIVGMFVSGLIALVVGIPTLRLKGDYLAIATL 128

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + +L+  + +TNG AGI+   +                              ++
Sbjct: 129 GVSEIIRILLVNLRGLTNGPAGIFGLPQFSNWQ-------------------------IV 163

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                 S  ++     +    A   IR+++ A  ++       K+ AF + +    +AG 
Sbjct: 164 FLFAVGSILVVSNFIHSGPGRATLAIREDEIAAEAMGVNTTKYKVIAFVMGAVMASIAGT 223

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A+ +  + P  + F ++I V+ IV+ GG+ S +    +  +L  +     G       
Sbjct: 224 LYASYQQSVFPKDYGFMKSIDVLIIVVFGGIGSTTGAVVSAVVLGILNMYLQGF------ 277

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                    +     +  +AL  +++ +   LL     S  
Sbjct: 278 ---------SDLRMIIYALALIAIMIFKPSGLLGTWEFSVK 309


>gi|254453705|ref|ZP_05067142.1| inner-membrane translocator [Octadecabacter antarcticus 238]
 gi|198268111|gb|EDY92381.1| inner-membrane translocator [Octadecabacter antarcticus 238]
          Length = 296

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 60/293 (20%), Positives = 126/293 (43%), Gaps = 16/293 (5%)

Query: 50  VMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMI 109
           ++ A  L++  G  G+++      YA+GAY+  +L ++ G  + + IP + ++    G +
Sbjct: 1   MILALALNLQWGLTGMVNFGIAGFYALGAYTSGLLSAKAGWPLGVTIPAAVLVGLVAGGL 60

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           + L S++ R D+LA+ TL + E+ + +L+    IT G  G+ +  + +    +V S    
Sbjct: 61  VALLSMRLREDFLAVVTLGVGEMIRLVLLNEDQITEGPRGLRIEAQPFRDMISVDS---- 116

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                    Y  F   ++     +   I   +R++ +    R IR++      L   +  
Sbjct: 117 ---------YPFFYLCLVALSVAVIFLICERIRKSPMGRTLRAIREDDVVAGVLGKNVFR 167

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            ++  FA+   F+G+AGA +A     ISP++F     + +   VI+GG  +   +     
Sbjct: 168 HRVQIFALGGGFMGLAGALYAHYTQNISPEVFMPMVAMFIWMSVIVGGAGNNRGLLIGAG 227

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +I  +E    +      +        +      + + L + + +R   LL  
Sbjct: 228 TVIMFLEGTRFIGD---VAPWLDAEKMSSLRIITIGMLLIVTLRVRPRGLLPE 277


>gi|126737449|ref|ZP_01753184.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
 gi|126722034|gb|EBA18737.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
          Length = 361

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 68/325 (20%), Positives = 130/325 (40%), Gaps = 17/325 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L V   LL   F       ++       +LI+ +   GL ++ G  G  SL      A+G
Sbjct: 22  LGVYAALLALAFALPYLIDEFYLGEVTNVLIWAIAGLGLMLLTGQTGQASLGHAAFLAVG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  IL  +      +  P++ +I+G  G I+ +P+L+  G YLAIAT+ +S +  +I+
Sbjct: 82  CYTNTILIEQGLP-FVIAFPLAGVITGVIGTIVAIPALRLHGIYLAIATIALSILADDII 140

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +  +P T G +G                +I  F F           YY++L +       
Sbjct: 141 VLMEPWTGGVSGK------------FPEMITIFGFEIERWTMPSRFYYLVLVVTICCTLF 188

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L R+ +  A+  +RD++ +  ++   I   K +AF +S    G AGA         +
Sbjct: 189 YRNLLRSPLGRAFAAVRDSEVSATAMGVHIARTKATAFGLSCMITGWAGALMGYYAGTFN 248

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            + F    +I ++ ++++GG+ S+        ++  + +    +        +       
Sbjct: 249 NETFSIVISITLLMMIVIGGLGSIHGAFFGAVVVAFLPQALSILKDGLVGGGVAI----P 304

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
              T +  + L L IL     +   
Sbjct: 305 GLETGVFGMILILFILFEPMGIYGR 329


>gi|126665940|ref|ZP_01736921.1| inner-membrane translocator [Marinobacter sp. ELB17]
 gi|126629874|gb|EBA00491.1| inner-membrane translocator [Marinobacter sp. ELB17]
          Length = 347

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 75/311 (24%), Positives = 134/311 (43%), Gaps = 15/311 (4%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +    +  Y+  +G  + I V+   GL+I+ G  GL+SL       +G Y+   L    G
Sbjct: 35  IFPFMADSYLMYLGCLVGIAVISTTGLNILTGFTGLISLGQAGFMGVGGYTVAWLSMNTG 94

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L   + + ++ +++ A G+++GLPSL+ +G YLAIATL  S     I  +W+ +T G  G
Sbjct: 95  LPFPVTLLLAGLLAAAVGILVGLPSLRVKGLYLAIATLAASVFLHFIFAEWESVTGGMGG 154

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           + +     F  T                      Y++++ +  L       + RT I  A
Sbjct: 155 LSLEPAHLFGLTFQTDFAM---------------YFIIVPLAVLMVLAAKNVFRTRIGRA 199

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
           +  IRD   +   L   ++  KL +FA+SS + G+AG  FA     ++P+ F  S +I  
Sbjct: 200 FIAIRDRDISAEILGINLLHYKLMSFALSSFYAGVAGGLFAYFFRVVTPESFPLSMSIFY 259

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           ++ VI+GGM +L       A +  + E+   +               +     +    + 
Sbjct: 260 LAAVIVGGMGNLLGGILGAAFMTLIPEVLQLLTAALTPFYPNAPIFMSPMLEIIFGALIV 319

Query: 330 LVILMRSHSLL 340
             ++   H L 
Sbjct: 320 GFLIFEPHGLA 330


>gi|327462073|gb|EGF08402.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus sanguinis
           SK1057]
          Length = 317

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 82/340 (24%), Positives = 148/340 (43%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     L ++  LL+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNIFWLSLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  S    + ++ + V A+I+G   + +GLP+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLVGAVIAGIVALAVGLPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + ++I    +TNG AGI                                    +
Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++  + L   R+ I  +  ++R+++ A  S+       K++AF + +    +AG+
Sbjct: 161 YVFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F+  I ++ IV+ GG+ S++    A  +L  +  L   +      
Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGVLNMLLQDV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                    +     +  +AL LV++ R   LL     S 
Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305


>gi|284046344|ref|YP_003396684.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283950565|gb|ADB53309.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 320

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 83/324 (25%), Positives = 151/324 (46%), Gaps = 9/324 (2%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           +L + L A  S  +   +G+    Y +F  GL + VG  G+++       AIGAY   IL
Sbjct: 4   VLAVSLDALTSADFWIGVGVLAGTYAIFTLGLQLNVGFTGIINFGQAGFMAIGAYGMGIL 63

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
             R G S+W  +PV+ +++ A G+++GLPSL+ R DY AI T+  +EI + +    + +T
Sbjct: 64  VVRAGWSLWAALPVATLMAMAAGVLIGLPSLRLRADYFAIVTIAFAEIVRYVAQNARGLT 123

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G  G+            V   I  +   S    + + +  V+     +   ++  L+R+
Sbjct: 124 GGNQGLL---GFDDQWLDVSDTILGWLPESMQEQFLLPLLLVVWATVAILTVLLKLLQRS 180

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                 R IR+++ A  +L   ++  KL + A+++A   +AG F A +   +SP+ F+  
Sbjct: 181 PWGRVLRAIREDEDAARALGKNVLAYKLQSIALAAALGAIAGYFLALNLSFLSPEEFEPQ 240

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
              I  +I+ILGG+ S   +A A+ I+  ++E    ++       +            ++
Sbjct: 241 FTFIGFTILILGGLASYVGVALASVIIWALLEATRFVDLPLAAEKVA------ALRFIIV 294

Query: 325 VIALFLVILMRSHSLLRLRTPSNF 348
            +AL L++  R   LL  R     
Sbjct: 295 GVALILLVAFRPQGLLGKREEMVL 318


>gi|332367223|gb|EGJ44958.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus sanguinis
           SK1059]
          Length = 317

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 82/340 (24%), Positives = 147/340 (43%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     L ++  LL+ + + A     +   +  QI I ++ A GL++VVG  G  SL 
Sbjct: 6   KVNIFWLGLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLVVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  S    + ++ +   A+I+G   + +GLP+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLAGAIIAGIVALAVGLPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + ++I    +TNG AGI                                    +
Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++  + L   R+ I  +  ++R+++ A  S+       K++AF + +    +AG+
Sbjct: 161 YVFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F+  I ++ IV+ GG+ S++    A  +L  +  L   +      
Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGVLNMLLQDV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                    +     +  +AL LV++ R   LL     S 
Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305


>gi|99079959|ref|YP_612113.1| inner-membrane translocator [Ruegeria sp. TM1040]
 gi|99036239|gb|ABF62851.1| inner-membrane translocator [Ruegeria sp. TM1040]
          Length = 358

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 73/344 (21%), Positives = 140/344 (40%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ ++Y     L       L F  +    +  +++++ +  LIY + A GL+I+VG  
Sbjct: 20  FPIKFDRYRYYAVLA------LAFGVVPFVVNDYWVNAILLPFLIYAIAAIGLNILVGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +   +S+++ + ++  I+    ++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKLMTAFPEVSMFIHVLLAGGITALVCVLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N                       F    +        
Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGQINAPERDVFGIIITGPNAPAWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L      A +   L R      W  IRD   A   +    + AK++AFAVS  F+
Sbjct: 185 TYLFCLIFLTFCAIVARNLTRGTQGRTWMAIRDMDIAAEIIGVNPLKAKMTAFAVSGFFV 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F A         + F  +++ +V+ +VI+GG+ S+       A L+ +  +   
Sbjct: 245 GISGALFFAVYLGAVEVGEAFGINKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVILKV 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +   +          F      ++   +   +++  H L +L  
Sbjct: 305 VGVDWLGWPTDIVAHF---QLVIVGALIITFLILEPHGLAQLWR 345


>gi|160940517|ref|ZP_02087861.1| hypothetical protein CLOBOL_05412 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436477|gb|EDP14244.1| hypothetical protein CLOBOL_05412 [Clostridium bolteae ATCC
           BAA-613]
          Length = 331

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 57/315 (18%), Positives = 119/315 (37%), Gaps = 24/315 (7%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +       Y+ S+ +        +   SI+ G  G +SL       +GAY   +L  
Sbjct: 19  AAVIPVFVRTPYLLSICVMTFYMASASLAWSILGGLTGQISLGHASFMGLGAYMSTLLLV 78

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
           +  +S W+ IP+  +  GA   ++  P    RG Y ++ T+   E F+N++  W     G
Sbjct: 79  KLNVSPWISIPLVFLFVGALTALLLSPCFVLRGPYFSLVTIAFGEAFRNLMTNWDFAGKG 138

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
           +               +                ++  +Y+ L M      I+  + R+  
Sbjct: 139 QG--------------LLLPFGDNSLALLRFKSKVPYFYLSLLMVIAVYLIVRAIDRSKF 184

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A +T+R+++    ++    +  K+ A  VS   I + G F+A     I+PD+   +++
Sbjct: 185 GYALKTVREDEDTANAIGINPLKYKVLATFVSCGLIAVCGVFYANYIRFINPDIMIQAQS 244

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           +  +   ++GG+ S++       IL  + +                       +  +  I
Sbjct: 245 VEFVLPAVIGGIGSVTGPLIGAIILTPLAQYLNS----------TLSSIAPGANLLVYAI 294

Query: 327 ALFLVILMRSHSLLR 341
            L +VIL +   ++ 
Sbjct: 295 ILIVVILFQPRGIMG 309


>gi|323351068|ref|ZP_08086725.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus sanguinis
           VMC66]
 gi|322122792|gb|EFX94501.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus sanguinis
           VMC66]
 gi|325687064|gb|EGD29087.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus sanguinis
           SK72]
          Length = 317

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 81/340 (23%), Positives = 147/340 (43%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     L ++  LL+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KINIFWLGLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  S    + ++ +   A+I+G   + +GLP+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLAGAIIAGIVALAVGLPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + ++I    +TNG AGI                                    +
Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++  + L   R+ I  +  ++R+++ A  S+       K++AF + +    +AG+
Sbjct: 161 YVFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F+  I ++ IV+ GG+ S++    A  +L  +  L   +      
Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGVLNMLLQDV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                    +     +  +AL LV++ R   LL     S 
Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305


>gi|218295360|ref|ZP_03496173.1| inner-membrane translocator [Thermus aquaticus Y51MC23]
 gi|218243992|gb|EED10518.1| inner-membrane translocator [Thermus aquaticus Y51MC23]
          Length = 355

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 65/306 (21%), Positives = 123/306 (40%), Gaps = 21/306 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y   +   + I  + A GL ++VG  G +SL       +GAY+   L         L I
Sbjct: 56  PYPMYVATLVAIGALSALGLHLLVGGAGQISLGHAAFMGVGAYAASHLAGPLAP---LGI 112

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +   I+   G+++GLP+L+ +G YLAIATL    +   +   W+ +T G  G  +    
Sbjct: 113 LLGGGIAALLGLLLGLPALRIKGVYLAIATLAFQFLADYVFKNWEAVTGGIRGRTLPPAE 172

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
            F          ++      +    +   +L+               T    A+  +RDN
Sbjct: 173 LFGIPLDSPERLWYLVLLFLLPLFFYGKRLLM---------------TRTGRAFMAVRDN 217

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             +       +   KL AFA+S+ + G+AG   A     ++P+ F  S +I  +++VI+G
Sbjct: 218 DLSARVAGVDLTRVKLFAFALSAFYAGVAGGLLAQLYKAVTPEYFPLSVSIQYLAMVIVG 277

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  ++         ++ + E+    N Y      ++  +       L  + +   +++  
Sbjct: 278 GAGTVLGAILGAFFVLLIPEVL---NSYVGALGPQYAAALAAWRNVLFGLLILAFLILEP 334

Query: 337 HSLLRL 342
             L+ L
Sbjct: 335 LGLVGL 340


>gi|229818484|ref|ZP_04448765.1| hypothetical protein BIFANG_03792 [Bifidobacterium angulatum DSM
           20098]
 gi|229784354|gb|EEP20468.1| hypothetical protein BIFANG_03792 [Bifidobacterium angulatum DSM
           20098]
          Length = 357

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 75/351 (21%), Positives = 142/351 (40%), Gaps = 42/351 (11%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           L + +   +  +  VV   +L           Y+  + +   I V+    L++ +G LG 
Sbjct: 6   LSIKQSYLVCAVGIVVLFGILMGVCETGAVSLYVKGVIMTCCIAVIMTTSLNLTIGVLGQ 65

Query: 66  LSLNCVIAYAIGAYSYVILG---------SRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
           L+L C    AIGAYS  ++              +   L+  V  +++   G+++G+P+L+
Sbjct: 66  LTLGCCGFEAIGAYSAALVSKLLVANGVVMNDTVRFLLVTVVGGLVACVFGVLIGIPALR 125

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
             GDYLAI TL   EI + I+   K                        L +  +  +  
Sbjct: 126 LHGDYLAIITLGFGEIIRVIIQNLKVAGG------------------EGLDKGQQGQALI 167

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
            I  +   YV+  +  ++  ++    R+    A + IRD++ A  +    + + K+  FA
Sbjct: 168 GIDRLANLYVVFWITVVTVVLLFMFARSRYGRAVKAIRDDEIAASASGINVTYMKVLVFA 227

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           +S+ F G+AG  FA     ++P M  + ++I  + +V+ GGM SL+    +   L  + E
Sbjct: 228 ISAFFAGIAGGIFAQYIGALTPSMAGWLQSINYVIMVVFGGMGSLTGSIVSAIGLTILPE 287

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
           L    + Y                  +  + L L+++ R   +      S 
Sbjct: 288 LLRAFSDY---------------RMLVYSVVLVLIMIFRPQGIFGNWEFSL 323


>gi|167628618|ref|YP_001679117.1| branched-chain amino acid abc transporter, permease protein
           [Heliobacterium modesticaldum Ice1]
 gi|167591358|gb|ABZ83106.1| branched-chain amino acid abc transporter, permease protein
           [Heliobacterium modesticaldum Ice1]
          Length = 330

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 76/346 (21%), Positives = 133/346 (38%), Gaps = 41/346 (11%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           MS     LN  + I+  + +++   +   L       Y       I I ++ A  L+I+ 
Sbjct: 1   MSGVKKLLNLPNLIVAAVLLLFYGFVSFGLELGFIDDYYKLNLFLICINIILATSLNIIN 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G  S+      AIGAY   I+  + G    + I V A+ +   G ++G+P+L+ +GD
Sbjct: 61  GMTGQFSIGHAGFMAIGAYGSAIMTMKLGYPFPVGILVGALAAAIAGFLVGMPTLRLKGD 120

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLAIATL   EI + I++  + +                                  I +
Sbjct: 121 YLAIATLGFGEIIRVIILNIEYVGGAA--------------------------GLNGISQ 154

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
              +  L  +   +  II     +    A   IR+N+ A  ++   I   K+ AF + + 
Sbjct: 155 FTSWEWLFFLTVATVLIIKNFMTSTHGRACIAIRENEIAAETMGIDITRYKVIAFTMGAF 214

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           F G+AG+  A     I P  F F ++  ++  V+LGG+ SL+    +   L  +      
Sbjct: 215 FAGIAGSLHAHYFYTIQPTTFGFMKSFDILVFVVLGGLGSLTGSVISAIALTILSAFLQE 274

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                                 +  + L +V+L+R   L+     S
Sbjct: 275 YAE---------------LRMVIYSLLLVIVMLVRPQGLMGTAEFS 305


>gi|307544862|ref|YP_003897341.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307216886|emb|CBV42156.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 533

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 100/306 (32%), Gaps = 21/306 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+ A GL+I  G +G++++       +GAY+   +         L + ++   
Sbjct: 248 LSLGSVLVLAAIGLAITFGVMGVINMAHGELIMLGAYTTWAMQQLLPGQPGLALLLAIPA 307

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 + G+   +    +L    L      + +L  +      +  +            
Sbjct: 308 GFLVAALAGVAIERGVIQFLKGRPL------ETLLATFGVSLILQQLVRTVISPQNRTVV 361

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +      +  +   +   YVL     + A+++L +RRT +    R +  N+    +
Sbjct: 362 TPEWMSGSLMLNEGLSLTLNRLYVLGFALVVFAALMLVMRRTRLGLEVRAVTQNRGMARA 421

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +        +  FA+ S   G+AG   +   +         +  I    +V+ GG+ +L 
Sbjct: 422 MGIRATRVDILTFALGSGVAGLAGVALSQLTNV--GPNLGQNYIIDSFMVVVFGGVGNLW 479

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L  + ++          +              ++++ + L I  R   L   
Sbjct: 480 GTLVAGLSLGVINQVLEPWAGAVLAT-------------IVVLVFIILFIQKRPRGLFPQ 526

Query: 343 RTPSNF 348
           +  +  
Sbjct: 527 KGRAAE 532


>gi|115525212|ref|YP_782123.1| ABC transporter related [Rhodopseudomonas palustris BisA53]
 gi|115519159|gb|ABJ07143.1| ABC transporter related [Rhodopseudomonas palustris BisA53]
          Length = 584

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 54/299 (18%), Positives = 115/299 (38%), Gaps = 22/299 (7%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++   I +  + A GL ++ G  GL S        +GAY+     +  G+S WL + ++ 
Sbjct: 26  TLMNFIGLSAIVALGLVLMTGFGGLTSFGQAAFVGVGAYAAAWTTTSAGMSPWLGLLLAL 85

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
             +      +G  +L+  G +L ++T+        +  +   +     GI     +   G
Sbjct: 86  TATALLAAFLGAITLRLGGHFLPLSTIAWGLAIYFLFAEIPGL-GQHDGIKDIPPITLFG 144

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
            +  S  R              +YY++  +  L+ +++  L  +    A R++R      
Sbjct: 145 LSFASNDR--------------IYYIIWLLLGLAMALVANLLDSRKGRAIRSLRGGAVLL 190

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            SL    +  +L  F +++   G++G  +A     +SP  F+   +I  + + ++GG  S
Sbjct: 191 ASLGINQMRIRLYIFIIAAMLAGISGWLYAHMTRFVSPSPFEIRPSIEYLLMALVGGARS 250

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           +       A++I        +  Y  N+            T +  + L L++      L
Sbjct: 251 IYGAVVGAALVILAKNSIEDLLPYLTNNA-------GQLQTVVFSVFLVLILQHARGGL 302


>gi|254509902|ref|ZP_05121969.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacteraceae bacterium KLH11]
 gi|221533613|gb|EEE36601.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacteraceae bacterium KLH11]
          Length = 365

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 66/325 (20%), Positives = 133/325 (40%), Gaps = 13/325 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +   LL  +         +       +L++ +   GL I+ G  G  SL      A+G
Sbjct: 22  LCLYLILLAMVAAAPWWLDDFYLGELTNVLVWAIAGLGLMILTGHTGQASLGHAAFLAVG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            YS VIL         L  P++ +++G  G+ + +P+L+  G YLAI TL +S +  +I+
Sbjct: 82  CYSNVILIEAGVP-FLLAFPLAGLLTGIAGVTVAIPALRLHGIYLAIFTLALSVLMDDII 140

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +  +PIT G AG Y               +  F             ++++LG+  +    
Sbjct: 141 VLAEPITGGVAGKY------------LGGVEIFGHLVDRWGTPDQFFWLVLGVAVIVTLG 188

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            + L R+ +  ++  +RD++ +  ++   I   K+ +FA+S A  G+AGA         +
Sbjct: 189 YINLLRSPLGRSFIAVRDSEVSAQAMGVDIARTKMISFALSCAVTGLAGALMGLYAGAFN 248

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            + F    +I ++ ++++GG+ S+        ++  + +       Y    +     +  
Sbjct: 249 NETFSVIISIQLLMMIVIGGLGSIHGAFLGAIVIGFLPQFLSISKEYVGAIIGSNTVAIP 308

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                +  + L   IL     +   
Sbjct: 309 GLEFGIFGVILIAFILFEPMGMYGR 333


>gi|160895710|ref|YP_001561292.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160361294|gb|ABX32907.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 324

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 60/324 (18%), Positives = 128/324 (39%), Gaps = 28/324 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A    L   +         Y  ++     I+ +   GL+++ G  G L+L      A G
Sbjct: 9   VAWGLLLAAGIAFPWLAGNDYHLTVMSTAYIFAIATLGLNLITGYTGQLNLAHAGFMAAG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL   +G   W  + +S ++    G ++G+ SL+ +G Y +I TL +  I   ++
Sbjct: 69  AYTVGILTVDHGWPFWGGLVMSGVVCAVLGYLIGIVSLRLKGHYFSIFTLCVGYIMFLVI 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  GI                       +      + +YY++L     S  +
Sbjct: 129 EKWEGLTHGTVGIMGIPAPE-------------ALGALSFESPLALYYLVLAFLVASVWV 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  + R+ +   +  IR++ +   +L   ++  K+ AF +S  + G+AG  +A     I 
Sbjct: 176 MRRIVRSLLGRTFMAIRNSDELAEALGINLMRNKVLAFMLSVVYAGVAGGLYAGFVRFIG 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           PDM        ++   ++GGM ++         +  + +    +  Y             
Sbjct: 236 PDMAGVHHTFDMMIFAMVGGMGTVLGPLLGAIGMPWITQYLQFLQEY------------- 282

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                +    L ++++   + ++ 
Sbjct: 283 --RFIVFGPILVMLVIFMPYGVVG 304


>gi|224372151|ref|YP_002606523.1| abc transport system permease protein [Nautilia profundicola AmH]
 gi|223589478|gb|ACM93214.1| abc transport system permease protein [Nautilia profundicola AmH]
          Length = 350

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 70/355 (19%), Positives = 136/355 (38%), Gaps = 47/355 (13%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            + AV    L FL++       Y  ++   + I+++ A   +++ G  G  SL      A
Sbjct: 19  IIAAVTAVFLGFLYISPNLFNDYTITVLGNVYIFIILAVSYNLINGVTGQFSLEPNGFVA 78

Query: 76  IGAYSYVILGSR--------------------YGLSIWLLIPVSAMISGACGMIMGLPSL 115
           IGAY   +L                       +  + +  + +S ++S    + +  P  
Sbjct: 79  IGAYVTALLMLSPEVKADMYMIADPYPFIKDIFLPNPFFTLIISGIVSALVALTLAFPVF 138

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
           + RGDYLAI TL    I +  LI    I+NG  G+                         
Sbjct: 139 RVRGDYLAIVTLGFGFIIRIFLINNPEISNGSMGLDSIP--------------------- 177

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                   Y+ +     ++  ++  +  +    A + +RD++ A  ++       K  AF
Sbjct: 178 ----GFASYFWIGFTALVTIVLVYNIVYSKYGRAMKAVRDDEDAALAMGVNTFKTKTLAF 233

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
             S+ F G+ G   A+S   ISPD F F     ++ I++LGG+ S+S     T + IG +
Sbjct: 234 MTSAFFEGVGGGLLASSIGSISPDQFTFMLTFQLLIIIVLGGLGSMSGAIIGTLLFIGGM 293

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           E+   ++   ++  +            +  + L  ++L     L   +   ++++
Sbjct: 294 EVLRPLDDATWS--IGPVHGIPGLRMVVFSLILLGIMLFARKGLFGDKEIWDYVK 346


>gi|239617488|ref|YP_002940810.1| inner-membrane translocator [Kosmotoga olearia TBF 19.5.1]
 gi|239506319|gb|ACR79806.1| inner-membrane translocator [Kosmotoga olearia TBF 19.5.1]
          Length = 355

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 62/345 (17%), Positives = 121/345 (35%), Gaps = 9/345 (2%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
            S+RL+K   ++  +  +  + L L+L       Y   +   I IY + A  L+++ G  
Sbjct: 1   MSVRLSKRVNLILTITFLLFIALLLYLADGNLNTYYVRIISLIGIYGIMAVSLTLINGIT 60

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G+ SL      AIGAY+  +L           I    +       I  LP+    G  L 
Sbjct: 61  GIFSLGHAGFMAIGAYTSALLTMSVQQKEMTFILDKLIWPFNSIQIPFLPATLIGG--LV 118

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
            A       + ++ +    +     G     R+  L     +            I     
Sbjct: 119 AAGFAFLIGWPSLRLSGDYLAITTLGFSEIIRILALNLRSVT----NGALGLKGIPTYTN 174

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
            +   G  F++   I  L  ++   A + IR+++ A  S+   +   +L AF V   F G
Sbjct: 175 VWWAWGWLFVTVLFIASLVNSSYGRALKAIREDRVAAESMGINVFRHQLMAFVVGGFFAG 234

Query: 244 MAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
           +AG+ +A     I P             + ++++GG+ S+S      A+   + E    +
Sbjct: 235 IAGSLYAHWLSTIDPRTTTIGVLLTFNALIMIVIGGLGSISGAIIGAALFAFLTEWLRFL 294

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                    +F          ++     +V++     ++     +
Sbjct: 295 EESIKIFSFEFS-GIPGMRMLVLSALFVIVMIFWPRGIMGKNELT 338


>gi|192292197|ref|YP_001992802.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|192285946|gb|ACF02327.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 406

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 61/349 (17%), Positives = 122/349 (34%), Gaps = 14/349 (4%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++       + L      ++    +  T        +  +  IY +FA G +I+ G  G 
Sbjct: 1   MKHTSKFADMALFLGFAGVVALGPVIFTPIGAGYPDLLQKFAIYGIFAIGFNILFGLTGY 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           LS        +G+Y+ V       + +   +  S  ++G   + +G  SL+  G Y +I 
Sbjct: 61  LSFGHAAFLGVGSYAAVWSFKLVSMDLLPAVAFSVFLAGLLALAIGFISLRRSGIYFSIL 120

Query: 126 TLIMSEIFQNILIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           TL  +++  N+      PITNG+ G+ V              +          I     +
Sbjct: 121 TLAFAQMCYNMAYSVLTPITNGETGLRVLRNDPRYLDAAFGYVSPMPSLLGLQITSWTGF 180

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y+       +  + + + R+      R I+ NQ              LSAF +S  F G+
Sbjct: 181 YICGAALVAAFGLSIAIFRSPFGMTLRAIKSNQNRMGYTGYHSRPYLLSAFVISGMFAGL 240

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA  AA+      +  +++ +  V+ + +LGG  +L      T ++     +    N  
Sbjct: 241 AGALLAATDPLAGAERMQWTASGEVVLMTVLGGAGTLLGPVLGTGLIKYFENIFSAYNEQ 300

Query: 305 YFNSLLKF-------------DCSFNMRHTTLMVIALFLVILMRSHSLL 340
              ++  F                        + +    V++     ++
Sbjct: 301 QLTAVFSFEPDSLREGLVKTLSLFVGEGWQLTLGLLFMAVVIFLPGGIM 349


>gi|270262013|ref|ZP_06190285.1| hypothetical protein SOD_b02200 [Serratia odorifera 4Rx13]
 gi|270043889|gb|EFA16981.1| hypothetical protein SOD_b02200 [Serratia odorifera 4Rx13]
          Length = 370

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 91/349 (26%), Positives = 148/349 (42%), Gaps = 17/349 (4%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
              L +   +  LLL  +L       Y   +    L+Y+M A GL+IVVG  GLL +  +
Sbjct: 15  RARLGVALFMLGLLLAPWLAGAAGGNYWVRVIDFALLYLMLALGLNIVVGLTGLLDMGFI 74

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSA----------------MISGACGMIMGLPSL 115
             YA+GAY   +L S +    + L+                    +++  CG+++G P+L
Sbjct: 75  AFYAVGAYLTALLSSPHLTEQFPLLLHWFPDGLHLSILLLIPLSAVLAALCGILLGAPTL 134

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
           + RGDYLAI TL   EI + ++       N   G      +  +            +   
Sbjct: 135 RLRGDYLAIVTLGFGEIVRILMRNLDRPVNITNGPKGISGIDPVSLFGLKFSGMHEWFGI 194

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                   YY+   +      I L L+ + +  AW  IR+++ A  ++       KL AF
Sbjct: 195 RFSSLYLYYYLFAALLLAILFICLRLQHSRVGRAWTAIREDEDAARAMGINTRNFKLLAF 254

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
           A+ + F G+AGA FAA +  +SP+ F   E+I V+++V+LGGM  +  +     +L  + 
Sbjct: 255 AIGATFGGIAGALFAAFQGFVSPESFTLQESIAVLAMVVLGGMGHIPGVILGALLLAALP 314

Query: 296 ELCCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
           EL          +L         +       +AL LV+L R   L   R
Sbjct: 315 ELLRSTMGPLQQALFGQVWIDPEIIRQLFYGLALILVMLYRPAGLWPAR 363


>gi|327470485|gb|EGF15941.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus sanguinis
           SK330]
 gi|328946909|gb|EGG41046.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus sanguinis
           SK1087]
 gi|332359072|gb|EGJ36893.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus sanguinis
           SK49]
          Length = 317

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 81/340 (23%), Positives = 148/340 (43%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     L ++  LL+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KINIFWLGLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  S    + ++ +   A+I+G   +++GLP+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLAGAIIAGIVALVVGLPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + ++I    +TNG AGI                                    +
Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++  + L   R+ I  +  ++R+++ A  S+       K++AF + +    +AG+
Sbjct: 161 YVFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F+  I ++ IV+ GG+ S++    A  +L  +  L   +      
Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGVLNMLLQDV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                    +     +  +AL LV++ R   LL     S 
Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305


>gi|282864544|ref|ZP_06273599.1| inner-membrane translocator [Streptomyces sp. ACTE]
 gi|282560483|gb|EFB66030.1| inner-membrane translocator [Streptomyces sp. ACTE]
          Length = 368

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 71/327 (21%), Positives = 128/327 (39%), Gaps = 16/327 (4%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY---------- 81
                ++    G+  +   + A GL+++ GS G LS+      A+GAY Y          
Sbjct: 41  PFYLDRFWLQAGLFAMAAAIGAIGLNLLTGSTGQLSMGHAFFLAVGAYGYCVLAGESSTQ 100

Query: 82  -VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                S  GL  WL   ++ +++GA G +    + + RG YL IATL +  I Q++L   
Sbjct: 101 NGHALSGLGLPTWLAAVLAVLLAGAAGGLFSPIAGRLRGAYLGIATLALIFIGQHVLFNA 160

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G  G  V     F  T   +       P         ++Y  L    +SA     
Sbjct: 161 GSLTGGFNGRPVPPFSLFGFTFDDTETVVAAVPFHSFEK---LWYAALPALAVSAYFARG 217

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           + R     A   IRD++ A       +   +   F +SS + G+AG   A    R  P+ 
Sbjct: 218 VLRGRPGRALNAIRDHRIAAGVTGVPVARYRAGVFVLSSMYAGLAGVLLALVFQRTVPEY 277

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--YYFNSLLKFDCSFNM 318
           F    ++  ++++++GG+ S++      A +  + ++    +      ++      +   
Sbjct: 278 FGMVLSLEYLAMIVIGGLGSVAGAVVGAAFVSLLPQVLTHYSDSLPLVSAPGTGGVAPGE 337

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345
               L   A+  V+L     L R + P
Sbjct: 338 ASRYLYGAAVVAVVLFLPGGLTRPKKP 364


>gi|46201172|ref|ZP_00055635.2| COG4177: ABC-type branched-chain amino acid transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 312

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 71/332 (21%), Positives = 130/332 (39%), Gaps = 30/332 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +    +         S  Y   +G+  +   +   GL++++G  G +SL     +A+GAY
Sbjct: 8   LAALAIFITVAPLGFSNSYFYDVGVNAMFNAILCVGLNLLIGYAGQISLGHAGFFALGAY 67

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              IL  RYG+     + +SA + G    ++  P LK +G YLA+ATL +  I   +L  
Sbjct: 68  GSGILTERYGMPAIGALVLSASVVGVLAFVVARPILKLKGHYLAMATLGIGIIIHIVLKT 127

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              IT G  G+ V +      T     +                Y+V   +  L+  + L
Sbjct: 128 EAGITGGPDGMSVGNFKMLGFTVKGDQMW---------------YWVTGVLLVLAVWLSL 172

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L ++ +  A R +  ++     +       K+  F VS+ F  + G+ FA     I+PD
Sbjct: 173 NLIQSPVGRALRAVHGSEVGAEVVGVDTSSYKVLVFVVSAVFASIVGSLFAHKNGFITPD 232

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  F  ++ ++++V+LGGM S+        IL  + +L   +  Y               
Sbjct: 233 ISSFFHSVELVTMVVLGGMASIYGALIGAVILTLLPQLLAAVEQY--------------- 277

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
              ++   +   ++     LL     S     
Sbjct: 278 EAMILGAIMMGTMIFMPKGLLPSLLASLKRRE 309


>gi|332358287|gb|EGJ36113.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus sanguinis
           SK355]
          Length = 317

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 81/340 (23%), Positives = 147/340 (43%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     L ++  LL+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNIFWLGLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  S    + ++ +   A+I+G   + +GLP+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLAGAVIAGIVALAVGLPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + ++I    +TNG AGI                                    +
Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++  + L   R+ I  +  ++R+++ A  S+       K++AF + +    +AG+
Sbjct: 161 YAFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F+  I ++ IV+ GG+ S++    A  +L  +  L   +      
Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGILNMLLQDV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                    +     +  +AL LV++ R   LL     S 
Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305


>gi|325696299|gb|EGD38190.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus sanguinis
           SK160]
          Length = 317

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 81/340 (23%), Positives = 147/340 (43%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     L ++  LL+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNIFWLGLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  S    + ++ +   A+I+G   + +GLP+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLAGAIIAGIVALAVGLPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + ++I    +TNG AGI                                    +
Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++  + L   R+ I  +  ++R+++ A  S+       K++AF + +    +AG+
Sbjct: 161 YVFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F+  I ++ IV+ GG+ S++    A  +L  +  L   +      
Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGVLNMLLQDV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                    +     +  +AL LV++ R   LL     S 
Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305


>gi|149377725|ref|ZP_01895460.1| ABC-type branched-chain amino acid transport system [Marinobacter
           algicola DG893]
 gi|149358010|gb|EDM46497.1| ABC-type branched-chain amino acid transport system [Marinobacter
           algicola DG893]
          Length = 335

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 69/312 (22%), Positives = 123/312 (39%), Gaps = 17/312 (5%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            A     +   + IQ+ I      GL+++VG  G +SL     + +GAY   I    YG 
Sbjct: 24  PAFLGNPFHYELVIQMAIIAATVVGLNLLVGFAGQISLGHAGFFGLGAYFTGIATGTYGW 83

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S    + V A++ G    ++G P L+ +G YL++ATL +  I   IL   + IT G  G+
Sbjct: 84  SSLPALVVGAVVVGTIAWLVGRPILRLKGHYLSMATLAVGFIIAIILNNERAITGGPDGM 143

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            V      L     S    +      +      Y +   +   +    L L  + I  A 
Sbjct: 144 PV--PALDLFGWELSTFGRYSLFGIEISGVQAWYILASVVLLAAVWFALNLIESPIGRAL 201

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R++  ++ A   +       K   F +S+ +  + G  +A  +  I+P +  F  +I+ I
Sbjct: 202 RSVHGSEVAASVVGVDTAKYKSLVFVISAIYASVMGGLYAHFQGFITPAVASFEFSILFI 261

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           ++V+LGGM S   +     +L  + ++                       T +  + L L
Sbjct: 262 TMVVLGGMGSTFGVILGAVVLKLLPQVLADFQE---------------LETVMFGLILML 306

Query: 331 VILMRSHSLLRL 342
            ++     LL  
Sbjct: 307 TMIFMPKGLLPT 318


>gi|91976046|ref|YP_568705.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91682502|gb|ABE38804.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 357

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 70/343 (20%), Positives = 149/343 (43%), Gaps = 27/343 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           +IF  R ++   I+ ++ + +               Y  S+ IQI I+ + A GL+I+VG
Sbjct: 21  TIFPTRTSRNAAIVGVVLICFA--------PLVLSGYWLSVLIQIGIFGIAALGLNILVG 72

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G +S+     + +GAY+   L +   + ++  IP++ +I+   G++ GLP+ + +G Y
Sbjct: 73  FTGQISIGHAAFFLLGAYTSAYLNNTLPIPVFFTIPLAGVITALVGLVFGLPAARLKGLY 132

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           L IATL    I  +   + +  + G           F  T                    
Sbjct: 133 LVIATLAAQYILIDFFSRAEWFSGGSVPASANPFSIFGYTLRGDKSY------------- 179

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +YV+L    +S  ++  L RT    A   +RD+  +   +   +   +  +F +++ F
Sbjct: 180 --FYVVLAYLLVSYLLVTNLMRTRDGRALVAVRDHYLSAEIMGINLTKYRTLSFGLAAFF 237

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AGA +A  +  +S + F    +I+ ++++I+GG+ S+S     TA ++ + E    +
Sbjct: 238 AGIAGALYAHYQLVVSNEGFGIERSILFLAMIIIGGIGSISGTLMGTAFVVLLPEAMEWI 297

Query: 302 N----FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +        + +L+ + +        + + +   ++     L 
Sbjct: 298 SMELKGGAIDRVLQLNNNLTFLREIAIGLIIIAFLVFEPDGLA 340


>gi|87120262|ref|ZP_01076157.1| putative ureashort-chain amide or branched-chain amino acid uptake
           ABC transporter permease protein, possibly fusion
           [Marinomonas sp. MED121]
 gi|86164365|gb|EAQ65635.1| putative ureashort-chain amide or branched-chain amino acid uptake
           ABC transporter permease protein, possibly fusion
           [Marinomonas sp. MED121]
          Length = 558

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 98/297 (32%), Gaps = 21/297 (7%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            + GL+I  G +G++++       +GAY+  ++       I   + V+   +     +MG
Sbjct: 283 ASIGLAITFGVMGVINMAHGEMIMLGAYTTYVVQLLMPNHIDYSLWVAIPAAFMVSGLMG 342

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           +   +    +L    L      + +L  +      +  +              S +    
Sbjct: 343 VIIERGVIRHLHGRPL------ETLLATFGISLILQQLVRSVFSPLNRQVFSPSWMTGSL 396

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
             +  +   +   Y+L     +  +++  LR+T++    R +  N+    ++     +  
Sbjct: 397 EINPVLSLTLNRLYILAFALIVFFALLTLLRKTSLGLNVRAVSQNRNMAKAMGVKTGWVD 456

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   +   +         +  I    +V+ GG+ +L     A   L
Sbjct: 457 AMTFGLGSGIAGIAGVALSQLTNV--GPNLGQAYIIDSFMVVVFGGVGNLFGTLVAAFSL 514

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +    M      +              ++++ + L I  R   L   +  +  
Sbjct: 515 GIATKFLEPMTGAVLAA-------------IIVLVFIILFIQKRPKGLFPQKGRAAE 558


>gi|317484398|ref|ZP_07943314.1| branched-chain amino acid transport system/permease component
           [Bilophila wadsworthia 3_1_6]
 gi|316924350|gb|EFV45520.1| branched-chain amino acid transport system/permease component
           [Bilophila wadsworthia 3_1_6]
          Length = 333

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 81/317 (25%), Positives = 138/317 (43%), Gaps = 31/317 (9%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y   + + + +Y + A  L++++G  G+  +     YA+GAY   IL + Y + I LL
Sbjct: 24  NTYWTEVAVNVGLYALLALSLNVILGQAGIFHMGHAAFYAVGAYVTAILNTHYQIPILLL 83

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK-WKPITNGKAGIYVAD 154
           IPV+   +    +I+  P +  RGDYL I T+ + EI +  LI     +T G  GI+   
Sbjct: 84  IPVAGAAAALFALIVARPIIHLRGDYLLIVTIGIVEIVRIALINDVFGLTGGANGIFGIA 143

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
           R    G  +R                I  YY++  M  L+  +  WL  +    A   I+
Sbjct: 144 RPELFGIKIRKA--------------IQFYYLIWIMVGLTVLLFHWLSESRFGRALNCIK 189

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           ++  A       +   KL AF + + + GMAG  FAA    ISP  F F E+++V ++VI
Sbjct: 190 EDDTAAEGCGMDVAHLKLMAFVIGAFWAGMAGNLFAAKMTIISPSSFTFWESVVVFAVVI 249

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           L G  S   +   T +++ + E+                  F      +  +A+ +++++
Sbjct: 250 LSG-GSQIGVLLGTFLIVALPEMFR---------------DFASARMLVFGLAMMIMMVV 293

Query: 335 RSHSLLRLRTPSNFLER 351
           R   LL        + R
Sbjct: 294 RPQGLLPPSPRRYDVRR 310


>gi|323692013|ref|ZP_08106261.1| hypothetical protein HMPREF9475_01124 [Clostridium symbiosum
           WAL-14673]
 gi|323503936|gb|EGB19750.1| hypothetical protein HMPREF9475_01124 [Clostridium symbiosum
           WAL-14673]
          Length = 354

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 78/343 (22%), Positives = 148/343 (43%), Gaps = 24/343 (6%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M  +  ++   + I   L +   LL+ + +        +  + + +  YV+ A  L++ V
Sbjct: 1   MKSYKNKILIQNTITYALVIAAFLLIQILMAGGNINSLLKGILVPLCTYVILAVSLNLTV 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLP 113
           G LG LSL       +GA+S                L   + + V A+++ A G+++G+P
Sbjct: 61  GILGELSLGHAGFMCVGAFSGAFFTHVMAASIPNPQLRFIIALFVGAVVAAAFGILIGIP 120

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
            L+ +GDYLAI TL   EI +N++      T+          +  L       +      
Sbjct: 121 VLRLKGDYLAIVTLAFGEIIKNVINVLYVGTDASGIHISTKDVASLNLAEGGKVIIKGAQ 180

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
                 ++  + +   +  ++  I+L +  +    A   IRDN+ A  S+   I   KL 
Sbjct: 181 GITGTPKMATFTIGFILVLITLFIVLNMINSRTGRAIMAIRDNRIAAESIGINITKYKLL 240

Query: 234 AFAVSSAFIGMAGAFFAASRDR--ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           AF+VS+A  G+AG  +A +      +P  F ++ +I+++  V+LGG+ ++     A  IL
Sbjct: 241 AFSVSAALAGVAGVLYAHNLATLAATPKSFGYNMSIMILVFVVLGGIGNIRGSVIAAVIL 300

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
             + E+  G+N Y                  +  I L +++L+
Sbjct: 301 TLLPEMLRGLNNY---------------RMLIYAIVLIVMMLL 328


>gi|90414544|ref|ZP_01222518.1| putative urea short-chain amide or branched-chain amino acid uptake
           ABC transporter permease protein, possibly fusion
           [Photobacterium profundum 3TCK]
 gi|90324351|gb|EAS40917.1| putative urea short-chain amide or branched-chain amino acid uptake
           ABC transporter permease protein, possibly fusion
           [Photobacterium profundum 3TCK]
          Length = 543

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 99/306 (32%), Gaps = 21/306 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+   GL+I  G +G++++       +GAY+  ++       I L + +S   
Sbjct: 258 LSLGSVLVLAGIGLAITFGVMGVINMAHGELIMLGAYTTYVMQQLMPNHIGLSLILSIPA 317

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++G+   +    +L    L      + +L  +      +  +            
Sbjct: 318 AFFVAGLVGVAIERGVIRFLYGRPL------ETLLATFGISLILQQAVRSVFSPLNRSVA 371

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +      +  +       Y++    F+ A+++  L++T +    R +  N+    S
Sbjct: 372 TPDWMSGMLEINPMLSLTYNRLYIIFFCFFVFAALVFVLKKTPLGLQVRAVSQNRSMARS 431

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +     +     F + S   G+AG   +   +         S  I    +V+ GG+ +L 
Sbjct: 432 MGVRSEWVDAMTFGLGSGVAGVAGVALSQLTNV--GPNMGQSYIIDSFMVVVFGGVGNLW 489

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L    ++                         L+++ + L I  R   L   
Sbjct: 490 GTLVAGLSLGLFNKILEPWAGAVLAK-------------ILVLVFIILFIQKRPRGLFPQ 536

Query: 343 RTPSNF 348
           R  +  
Sbjct: 537 RGRAVE 542


>gi|170749706|ref|YP_001755966.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831]
 gi|170656228|gb|ACB25283.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831]
          Length = 822

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 72/334 (21%), Positives = 133/334 (39%), Gaps = 31/334 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +++      +   +  L          +  Y   +   + +  +   GL++++G  GL+S
Sbjct: 1   MHRLRSAPAMRLGIAGLTAAALGLVALTAGYSHFVIALVALTTVAGVGLNVLLGLTGLIS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                 YAIGAY+  IL        WL +P +A+I+   G ++ +P+++ +G YLA+ T+
Sbjct: 61  FGQAGFYAIGAYASAILTLHGVS-FWLALPAAALIAALVGGLVAVPAMRVKGPYLAMLTI 119

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I ++ LI+   +T G+ G+ V D    LG  +           +          + 
Sbjct: 120 AFGFIVEHGLIEGGALTGGQNGLVVTDAPTLLGEPLSPAGLAVLAVLAAGASLAGFDLLA 179

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                          R+ +  A R +RD   A  +L    +  K  AFA+S+A  G+AGA
Sbjct: 180 ---------------RSRLGRAMRAVRDADVAAAALGFDPVRVKTLAFAISAALTGLAGA 224

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
                   I+P  F FS++I+ +  VI+GG  ++        + + + E   G+  Y   
Sbjct: 225 VLPPLMLFIAPSSFPFSQSILFVLSVIVGGAGTVLGPLLGALVTVLLPEALSGLAEY--- 281

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                             IA   V+ +    L+ 
Sbjct: 282 ------------RLLFFGIATLAVLWLVPSGLVG 303


>gi|311108207|ref|YP_003981060.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310762896|gb|ADP18345.1| inner-membrane translocator 53 [Achromobacter xylosoxidans A8]
          Length = 361

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 64/310 (20%), Positives = 120/310 (38%), Gaps = 18/310 (5%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
                Y   + I+I+IY +FA  L ++VG  GL+SL     + IGAY   +L      + 
Sbjct: 19  WNGSDYYTGLAIKIMIYAIFALSLQLLVGGAGLVSLGHAAFFGIGAYVAALLSPESEAAG 78

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
              +  +A+++ A   ++             I   +        +     I  G  GIY+
Sbjct: 79  LWWLLPAALLAAAAYALVTGALALRTRGVYFIMVTLAFSQMAYYVFHDTKIGGGSDGIYL 138

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
             R           +    +    +      Y+ +L    L+   +  LRR+    A   
Sbjct: 139 YFRPE---------LSVGGWMPFDLGDARTFYFFVLACLALAWGFLALLRRSPFGAALAG 189

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           IR N++   +   +    KL+A+ V +    +AG  FA     ++P++  + ++ +V+ +
Sbjct: 190 IRINEQRMRAAGYSTYPYKLAAYVVGATLASLAGFLFALKDGFVTPELLAWEQSGLVLLM 249

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           VILGGM SL      T  L+ + EL      +           +       + IA+  ++
Sbjct: 250 VILGGMGSLGGAVLGTVALVLLQELFQSQELFG---------DYARHWHLPLGIAIIALV 300

Query: 333 LMRSHSLLRL 342
            +  + L  L
Sbjct: 301 ALLPNGLAGL 310


>gi|91777571|ref|YP_552779.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91690231|gb|ABE33429.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 355

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 57/305 (18%), Positives = 117/305 (38%), Gaps = 24/305 (7%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           S+  ++L++ + A G ++++G  GLLS    I + +G+Y   ++ +R  L +   +  +A
Sbjct: 49  SLATEVLVFALAALGCNLLLGYTGLLSFGQGIFFGLGSYCAGLVLTRTALPVPAALFAAA 108

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +I  A   ++G  S++ RG Y  + TL   ++F  +      +T G  G+    R     
Sbjct: 109 IIGAAAAALVGWFSIRQRGTYFVMLTLAFGQLFYFLAYTTPDLTGGDNGLLDIPRPA--- 165

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                 +  F      +      Y  +  +  +   +++ +  +        IRDN+   
Sbjct: 166 ------LGLFGKTIVPLTSPWQYYGFVAVLFLVVFWLLMRVSHSVFGRTLLAIRDNEARA 219

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++   +   KL AF +S A  G+AGA  A            +  + +++ + ++GG  +
Sbjct: 220 AAVGYDVKRFKLMAFVISGAVTGLAGALHALMTGIAPLSNIDYHTSEMILVMTVIGGTGN 279

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L       A  +   +    +   +                 L+ I L  V L     L 
Sbjct: 280 LFASVLGAAFYVLFADWLSTLWPRW---------------LLLLGIVLIAVSLFMQRGLW 324

Query: 341 RLRTP 345
            L   
Sbjct: 325 GLGER 329


>gi|330822948|ref|YP_004386251.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|329308320|gb|AEB82735.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 332

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 70/323 (21%), Positives = 123/323 (38%), Gaps = 30/323 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  LL+   L    S  +   + + I + ++F  GLS++    G LS        +GA
Sbjct: 28  LWLPGLLVLFALPLFTSSPFHMHLAVLICLNIIFVNGLSLL-SRTGQLSFCHAAFMGMGA 86

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+ VI  +++     L + +   ++ A   ++G   L+ +G Y  + T    E+F+  L+
Sbjct: 87  YASVIATTQWHAPFLLSVALGVAVAAAVAFLLGAVILRLQGVYFVLVTFCFGELFRLFLL 146

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +    T G  GI        LG    +   F              Y +     F S +++
Sbjct: 147 EGGSYTGGANGIANIPPASILGLAFDTKTSF--------------YVLAAACAFASIALL 192

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L RT    A   + DNQ+   +    I   ++ AF + SA  G AGA  A     +SP
Sbjct: 193 IALFRTPQGTALDAVGDNQELAEASGIGIQRTQMFAFVLGSAMAGFAGALLAHYLGFVSP 252

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F    ++  I ++++GG  S+        I+  + EL                     
Sbjct: 253 ESFNQHISVAAIVMLVIGGRASVLGPILGALIMTPLPELFRSAIE--------------- 297

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
               L  I L LV+      L+ 
Sbjct: 298 TQNILYGITLILVLKFLPGGLVG 320


>gi|323703485|ref|ZP_08115132.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574]
 gi|323531575|gb|EGB21467.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574]
          Length = 357

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 64/331 (19%), Positives = 116/331 (35%), Gaps = 7/331 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  L +V      LF        +   +     IY++ A  +++V+G  G+ SL      
Sbjct: 10  LLTLGLVVLSCALLFFTQNFLDNFQARVLNLAAIYIILAVSMNLVLGFTGMFSLGHAGFM 69

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY   IL          +I     I      I            L  A       F 
Sbjct: 70  CVGAYVSAILTMSPASK--EVIYYMQPIISPLDKIQWPVFPAILVAGLVAAFFGFLIGFP 127

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + ++   +     G     R+        ++           I  I   +V  G    +
Sbjct: 128 ALRLRDDYLAIATLGFGEIIRI----VVTNTINITNGSLGLKNIPPIKSMWVYWGFAIAT 183

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I+  L  ++   A++ IRDN+ A  ++   I   KL +F + + F G+AGA       
Sbjct: 184 ILILKQLINSSWGYAFKAIRDNEIAAEAMGIDIFKHKLMSFTIGAFFAGIAGALMGHLIT 243

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            I P MF+F     ++ I++LGG+ S++    +  ++  ++E+   +             
Sbjct: 244 SIDPTMFRFLFTFQILLIIVLGGLGSMTGSVISAVVVTVMMEVLRFVEQPMTLLGFNIP- 302

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                   +  + L LVIL     L+  +  
Sbjct: 303 GIPGMRMVIFSVLLLLVILFYRQGLMGTKEF 333


>gi|259417813|ref|ZP_05741732.1| inner-membrane translocator [Silicibacter sp. TrichCH4B]
 gi|259346719|gb|EEW58533.1| inner-membrane translocator [Silicibacter sp. TrichCH4B]
          Length = 358

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 72/344 (20%), Positives = 141/344 (40%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ ++Y     L       + F  +    +  +++++ +  LIY + A GL+I+VG  
Sbjct: 20  FPIKFDRYRYYAVLA------VAFGVVPFLVNDYWVNAILLPFLIYAIAAIGLNILVGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +   +S+++ + ++  I+G   ++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKLMTAFPEVSMFIHVLLAGGITGLVCVLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N                       F    +        
Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGQINAPERDVFGIIITGPNAPAWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L      A +   L R      W  IRD   A   +    + AK++AFAVS  F+
Sbjct: 185 TYMFCLIFLTFCAIMARNLTRGTQGRTWMAIRDMDIAAEIIGVNPLKAKMTAFAVSGFFV 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F +         + F  +++ +V+ +VI+GG+ S+       A L+ +  +   
Sbjct: 245 GISGALFFSVYLGAVEVGEAFGINKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVILKV 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +   +          F      ++   +   +++  H L +L  
Sbjct: 305 VGVDWLGWPTDIVAHF---QLVIVGALIITFLILEPHGLAQLWR 345


>gi|269121037|ref|YP_003309214.1| inner-membrane translocator [Sebaldella termitidis ATCC 33386]
 gi|268614915|gb|ACZ09283.1| inner-membrane translocator [Sebaldella termitidis ATCC 33386]
          Length = 340

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 137/339 (40%), Gaps = 36/339 (10%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L A++  +L FL     +   Y  ++   I IYV+FA  L+I VG +G LSL      A
Sbjct: 12  ILSAILIVILFFLLQIIVQINSYYSTILCNIFIYVLFAVSLNITVGLMGQLSLGHAGFIA 71

Query: 76  IGAYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +GAYS V+               + L   +  + +   G ++G+P L+ +GDYLAI TL 
Sbjct: 72  VGAYSSVMFTKYVFTSVPNDAVRLILGCIIGGLFAAFFGFLVGIPILRLKGDYLAIITLA 131

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
             E+ +  +     +  G AGI    ++    +                         + 
Sbjct: 132 FGEMIKFTIQNLDFL-GGAAGIRRIPQITTFTS-------------------------IY 165

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  +   II  +  +       +IR+++ A  ++   I   KL  F +S+ F G+ GA 
Sbjct: 166 WIVVICIIIITMIMTSRYGRLVLSIREDEIAAENIGIPINKIKLFGFTISAMFAGVGGAL 225

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            A S   + P  F F  +I ++ +V+LGG+ S++    + ++L  + E       ++ ++
Sbjct: 226 LAHSYPTLEPLQFNFVFSIDILVMVVLGGLGSITGAIVSASLLTILNESLRSFANFFPSN 285

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                            + L  +++ R   LL       
Sbjct: 286 ---IGMYVQQGRYAFYALVLIFIMIFRPSGLLGTGEFRL 321


>gi|300788859|ref|YP_003769150.1| branched-chain amino acid ABC transporter permease [Amycolatopsis
           mediterranei U32]
 gi|299798373|gb|ADJ48748.1| permease component of ABC-type branched-chain amino acid transport
           system [Amycolatopsis mediterranei U32]
          Length = 380

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 73/349 (20%), Positives = 136/349 (38%), Gaps = 15/349 (4%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +    L   A    LL+ L              G  ++I  + A GL++VVG  G L
Sbjct: 15  RPRRGPASLVRKAAWLALLVVLLALPLYLDAAWLKAGQYMMIGAVGAIGLTLVVGQAGQL 74

Query: 67  SLNCVIAYAIGAYSYVI--------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           SL        G  +Y +            +GL   L +  + +++   G+     + + R
Sbjct: 75  SLAHAFFLLAGGTAYTVLSGPIGDDRVVGFGLDPGLSLLGAVVVAALLGLAFAPVAGRLR 134

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           G YL +A+L +  +        + +T G +           G                + 
Sbjct: 135 GIYLGVASLALVFLGLYFGQSAEELTGGTSTGRAPAPFSLFGFPFTDDGPEITLLGVPIR 194

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
               M+Y+ L +  L+  I     R  +  +WR +RDN+ A   +  +++ AK  AFAVS
Sbjct: 195 QAERMWYLFLLLTVLAFVIARGAVRGRVGRSWRAVRDNEAAAAVMGVSVMRAKAGAFAVS 254

Query: 239 SAFIGMAGAFFAASRDRI-----SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
           SA+ G+AGA      D +         +  + +I  +++VI+GG+ S+        I+ G
Sbjct: 255 SAYGGLAGAMTVLWFDILKPDESEFGTYGINVSIAYLAMVIIGGLGSVPGALVGALIVNG 314

Query: 294 VVELCCGMN--FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           + ++    +    +F+       +  +  + +   A+ LV+L     L 
Sbjct: 315 LPQVLALYSADLGWFSGTGDGALTPVLVSSFVYGAAIILVVLFEPGGLA 363


>gi|319761090|ref|YP_004125027.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|317115651|gb|ADU98139.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
          Length = 332

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 70/323 (21%), Positives = 124/323 (38%), Gaps = 30/323 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  LL+   L    S  +   + + I + ++F  GLS++    G LS        +GA
Sbjct: 28  LWLPGLLVLFALPLFTSSPFHMHLAVLICLNIIFVNGLSLL-SRTGQLSFCHAAFMGMGA 86

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+ VI  +++ +   L + +   ++ A   ++G   L+ +G Y  + T    E+F+  L+
Sbjct: 87  YASVIATTQWHVPFLLSVALGVAVAAAVAFLLGAVILRLQGVYFVLVTFCFGELFRLFLL 146

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +    T G  GI        LG    +   F              Y +     F S +++
Sbjct: 147 EGGSYTGGANGIANIPPASILGLAFDTKTSF--------------YVLAAACAFASIALL 192

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L RT    A   + DNQ+   +    I   ++ AF + SA  G AGA  A     +SP
Sbjct: 193 IALFRTPQGTALDAVGDNQELAEASGIGIQRTQMFAFVLGSAMAGFAGALLAHYLGFVSP 252

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F    ++  I ++++GG  S+        I+  + EL                     
Sbjct: 253 ESFNQHISVAAIVMLVIGGRASVLGPILGALIMTPLPELFRSAIE--------------- 297

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
               L  I L LV+      L+ 
Sbjct: 298 TQNILYGITLILVLKFLPGGLVG 320


>gi|167769502|ref|ZP_02441555.1| hypothetical protein ANACOL_00836 [Anaerotruncus colihominis DSM
           17241]
 gi|167668470|gb|EDS12600.1| hypothetical protein ANACOL_00836 [Anaerotruncus colihominis DSM
           17241]
          Length = 347

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 75/341 (21%), Positives = 138/341 (40%), Gaps = 57/341 (16%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            ++L   + A     Y   + + I+I ++ A  L++  G LG ++L      ++GAY+  
Sbjct: 23  FIVLTALMKAGVINTYWAGVIMLIMINIILATSLNLTTGVLGQIALGHAGFMSVGAYAAA 82

Query: 83  IL----------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           I                  +    +    + V+ +++   G+I+G+P+L+ +GDYLAI T
Sbjct: 83  IFSMKIAEAAKLVEKGAPTAAGFGTFLASLVVAGVVAAIFGLIVGIPALRLKGDYLAIIT 142

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + I+      T G  G+    +L    T                         
Sbjct: 143 LGFGEIIRVIIEN-VEFTGGAQGLSGIPKLSNFNT------------------------- 176

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  L+ +++    R+    A   IR++  A  +      + K+ AF +S+ F G+AG
Sbjct: 177 VYWVTALTIAVLFAFGRSRHGRAIIAIREDDIASEASGIPNTYYKVLAFTISAFFAGVAG 236

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A +A     +    F F  +I ++ IV+LGG+ SL+    A   L  + E   G + Y  
Sbjct: 237 AVYAQQMQVLGAKTFNFMRSIDILVIVVLGGLGSLTGSIIAAVGLTVLPEALRGFSEY-- 294

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                           +  +AL +V++ +   LL  R  S 
Sbjct: 295 -------------RMLIYSVALIVVMIFKPSGLLGTREFSM 322


>gi|116749713|ref|YP_846400.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
 gi|116698777|gb|ABK17965.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
          Length = 318

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 77/332 (23%), Positives = 136/332 (40%), Gaps = 34/332 (10%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+ P ++           Y   + I  L Y+M A   +++ G  G +S        IGAY
Sbjct: 9   VLVPAVVLFGFLPFGLGSYHLHVVIVSLFYLMMASSWNLLAGYTGQVSFAHAAFAGIGAY 68

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  IL  R+GL+ W+ + V  M++   G+ +G+  L+  G YL++ TL  SEI + I+  
Sbjct: 69  TSGILAVRFGLNPWIGVVVGTMLAALLGLAVGVLCLRMGGIYLSLTTLGFSEILRIIITN 128

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +T G  G+ V                           ++  +YV+LG   L+  II 
Sbjct: 129 EYEVTRGTMGLQVPGLFAEY-------------------SKVGYFYVMLGAAVLTLIIIY 169

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  + I   +R ++++++A  SL   ++  ++ AF VSSA  GMAG  +      I+P+
Sbjct: 170 RLIHSNIGLNFRAVQNDERAAASLGVDVVRVRVLAFTVSSALAGMAGGLYGHYLLLITPE 229

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +    +  +V+S+ ++GGM S          L  + E       Y               
Sbjct: 230 IPSLDQQFLVLSMTVIGGMGSFPGPIIGAFSLEILSEYIRAYGEY--------------- 274

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           H  +  +   +      + L+ L        R
Sbjct: 275 HVLVFGLIALVAARFAPNGLMGLAKDRLVRRR 306


>gi|91781308|ref|YP_556515.1| branched chain amino acid ABC transporter ATPase/inner membrane
           protein [Burkholderia xenovorans LB400]
 gi|91693968|gb|ABE37165.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
           / amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Burkholderia xenovorans LB400]
          Length = 620

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 51/332 (15%), Positives = 113/332 (34%), Gaps = 39/332 (11%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + V       L  G      Y+ ++ IQ   + + A  + ++ G  G L+      + 
Sbjct: 32  GWIMVAGFAAALLAAGPFVFGSYLLNILIQAFFFSIVAVTVDVLWGYTGYLTFGQSAFFG 91

Query: 76  IGAYSYVILGSRYGL---SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI--ATLIMS 130
           +GAY+  ++ +  G     + + +  + +++GA G ++G  S             +L++ 
Sbjct: 92  LGAYAAGLVFTHGGFSAGYVVVALGAAIVVTGAVGGLLGWLSFYRGASPFFAIVMSLVLP 151

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +   +L+     T   +G+                        +F +     Y++    
Sbjct: 152 IVLSQLLLSGGQWTGSSSGLTGYP--------------------TFDLSLQAWYWIAGVT 191

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             + A++     R+        IRDN+     L       K+   A ++   G+AG  + 
Sbjct: 192 LLVVATLAWLFVRSDGGRVLAAIRDNESRGSYLGINTSLVKIILLAATAVIAGLAGFGYG 251

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           +    ++P++  F     +I  V LGG  +L        ++                   
Sbjct: 252 SFSGVVAPELTGFVLGTQLIIWVALGGRGTLWGPVIGALLINVGTAYLSS---------- 301

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               S       ++  A  +VI++    L+ L
Sbjct: 302 ----SMPFAWQLILGAAFVIVIVLVPQGLVPL 329


>gi|323701782|ref|ZP_08113453.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574]
 gi|323533318|gb|EGB23186.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574]
          Length = 326

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 78/349 (22%), Positives = 147/349 (42%), Gaps = 42/349 (12%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           MS+F  ++ K   IL +L +++  + F+         + +   I I I ++ A  L+++ 
Sbjct: 1   MSMFQRQIGKQFAILLVLVLIWLAVEFMIR-FGILNPFYELNLILIGINIILAVSLNLIN 59

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G  S+      A+GAY   ++  +  L + L +   A+++G  G+++G+P+L+ RGD
Sbjct: 60  GFNGQFSIGHAGFMAVGAYGAAMITLKTQLPLPLALLFGALLAGVFGVLVGIPTLRLRGD 119

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLAIATL   EI + I++    I  G  G+                             +
Sbjct: 120 YLAIATLGFGEIIRGIIVNIDYI-GGAYGLSGIP-------------------------K 153

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           I  +  +  +  L+  II     +    A  +IR+N+ A  ++       K+ AF + S 
Sbjct: 154 IATWSWVFWLTVLTVIIITNFVNSTHGRATISIRENEIAAEAMGINTTKYKVMAFTIGSF 213

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           F G+AG   A     I P+ F F ++  ++ +V+LGG  S++    A   L  +      
Sbjct: 214 FAGLAGGLHAHYFYTIQPNTFNFLKSFDILVMVVLGGQGSITGSIIAAIFLTIISASLQS 273

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
           +                     +  + L +++L R   L+  +  S  +
Sbjct: 274 L---------------AALRLVIYALLLIIIMLFRPQGLMGTKEFSFKM 307


>gi|309776674|ref|ZP_07671648.1| branched-chain amino acid ABC transporter, permease protein
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915422|gb|EFP61188.1| branched-chain amino acid ABC transporter, permease protein
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 319

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 70/341 (20%), Positives = 135/341 (39%), Gaps = 43/341 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            +K +    L       ++ L +       Y  S    I I ++ A  L++++G  G  S
Sbjct: 5   FSKLNLCWILFTTALLTIITLLMQGGVINFYYQSTLYTIGINMILAISLNLIIGVTGQFS 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGL--SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           L       IGAY+  I+           + + +  +IS    +++ +P+L+ +GDYLAIA
Sbjct: 65  LGHAGFMCIGAYAAAIITKATPNLGGFAIAVVIGGVISALVALVVAIPTLRLKGDYLAIA 124

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL  SEI + I++                                     F I ++  + 
Sbjct: 125 TLGFSEIVRIIVLNMTITNGAA--------------------------GLFGIPKLTTWP 158

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +LL    +S  I+L   R+A   A  +IR+++ A  ++       K  AF + +    +A
Sbjct: 159 LLLFCLIVSLLIVLNFSRSAPGRACISIREDEIASEAMGINTTKYKTIAFVIGAVLASLA 218

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA +A +   + PD+F F++++ ++ +V+ GGM S +    A  ++  +           
Sbjct: 219 GALYACNFYVVKPDLFTFNKSVDILILVVFGGMGSFTGSIVAAVVIGFINMYLQNFAD-- 276

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                            +   AL L+++ R   L   +  +
Sbjct: 277 -------------VRMIIYGAALVLIMVFRPEGLFGTKEFT 304


>gi|291457343|ref|ZP_06596733.1| branched-chain amino acid ABC transporter, permease protein
           [Bifidobacterium breve DSM 20213]
 gi|291381178|gb|EFE88696.1| branched-chain amino acid ABC transporter, permease protein
           [Bifidobacterium breve DSM 20213]
          Length = 362

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 70/341 (20%), Positives = 129/341 (37%), Gaps = 42/341 (12%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  +    ++     +  +  YI  + +   I ++    L++ +G LG L+L C    A
Sbjct: 16  FLGILATFGIVMALCESGLADSYIKGIMMTACIAIIMTTSLNLTIGVLGQLTLGCCGFEA 75

Query: 76  IGAYSYVILGSR---------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           IGAY   +                   +   +  +++   G+++G+P+L+  GDYLAI T
Sbjct: 76  IGAYVAALASKYMVAAGIGVDPTARFLITTLIGGIVACVFGILIGIPALRLHGDYLAIIT 135

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + I+   K                        L +     +   I      YV
Sbjct: 136 LGFGEIIRVIIQNLKVAGG------------------MGLDKGAAGQALIGIERTANLYV 177

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  ++  ++    R+    A + IRD++ A  +      + K+  FA+S+ F G+AG
Sbjct: 178 VFWIMVVTVVVLFMFGRSRYGRAVKAIRDDEIAAGASGLNTTYLKVLVFAISAFFAGIAG 237

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             FA     ++P M  +  +I  + +V+ GGM SL+    +   L  + EL      Y  
Sbjct: 238 GIFAQYIGSLNPTMAGWLNSINYVIMVVFGGMGSLTGSIVSAIGLTILPELLRAFADY-- 295

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                              + L LV++ R   +      S 
Sbjct: 296 -------------RMLAYSVVLVLVMIFRPQGIFGSWEFSL 323


>gi|110637661|ref|YP_677868.1| branched-chain amino acid ABC transporter permease [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110280342|gb|ABG58528.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Cytophaga hutchinsonii ATCC 33406]
          Length = 543

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 104/312 (33%), Gaps = 29/312 (9%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL---SIW 93
           + + S      I +M A GLSI+ G  G++++       IGAY+  I+ S         W
Sbjct: 254 QNLFSGLSLGSILIMVALGLSIIYGLAGIINMAHGEFLMIGAYTTFIIQSLLPKGDLFFW 313

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + +PVS +++GA G I+    +++       + L+ +     +LI++     G       
Sbjct: 314 ISLPVSFLVAGAFGFIIERLIIRYLYSRPLES-LLATWGVSLVLIQFARTLFGDLTAVRT 372

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             +   G  + S           ++      +++    F+ A     L +T +    R +
Sbjct: 373 PAVLSGGWEITSH----------LVLPYNRLFIIGLCIFMIAITYYTLYKTRLGLRVRAV 422

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             N+     L           F + S   G AG       + +       +  +    +V
Sbjct: 423 TQNRNMSSCLGIETGKVDAITFFLGSGLAGTAGCAMTLIGNVV--PDMGQTYIVDSFLVV 480

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           + GG+ +++    +   +  + ++        +  +L                       
Sbjct: 481 VTGGVGNIAGTIVSGFGIGFIFKILESFFEAVYGKVLILAIIILFLQ------------- 527

Query: 334 MRSHSLLRLRTP 345
            +   L   +  
Sbjct: 528 FKPKGLFPDKGR 539


>gi|288961293|ref|YP_003451632.1| branched-chain amino acid transport system ATP-binding protein
           [Azospirillum sp. B510]
 gi|288913601|dbj|BAI75088.1| branched-chain amino acid transport system ATP-binding protein
           [Azospirillum sp. B510]
          Length = 632

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 49/316 (15%), Positives = 115/316 (36%), Gaps = 33/316 (10%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  ++   I ++ +   GL ++ G  G+ S        + AY+   L +     +   +
Sbjct: 44  TYQVTLANNIGVFALATLGLVLLTGVAGMTSFGQAAFVGVSAYATAYLATAAAGDLPAPL 103

Query: 97  PVS-----------AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
                          +++ A  +++G  +L+  G YL + T+        +    + +  
Sbjct: 104 AWMAGSPLAGLAAGLLLTLAIALVLGAVTLRLSGHYLPLGTIAWGLSLFYLFGTLEFL-G 162

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G +G+     L   G +                    ++Y++  +  L+ +  L L  + 
Sbjct: 163 GHSGVTGIPALSLFGVSFDRAE--------------SLFYLIWAILLLAVAATLNLLDSR 208

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +  A R +R  Q+   S+      AK++AF VS+ + G+AG  +A ++  +SP  F    
Sbjct: 209 VGRAIRALRGGQRMSESMGVDSFRAKMTAFLVSALYAGLAGWLYAYTQRFVSPAPFSLQA 268

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
            I  + + ++GG+  +       A +    +    +  +       F          +  
Sbjct: 269 GIDFLFMALIGGVGQVWGAVIGAAGVTFARQWLQDLLPHLLGRTGNF-------EAIVFG 321

Query: 326 IALFLVILMRSHSLLR 341
           + + L++      +  
Sbjct: 322 LLIILLMQRLPGGIAG 337


>gi|153809784|ref|ZP_01962452.1| hypothetical protein RUMOBE_00165 [Ruminococcus obeum ATCC 29174]
 gi|149833962|gb|EDM89042.1| hypothetical protein RUMOBE_00165 [Ruminococcus obeum ATCC 29174]
          Length = 355

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 76/338 (22%), Positives = 140/338 (41%), Gaps = 25/338 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  K + I   L +V  +++ +          +  + + + +Y + +  L++VVG  G L
Sbjct: 6   KTTKNNLINYGLVLVLFVIVEILSATGNLSNLLKGLMVPLCVYTIASISLNLVVGFSGEL 65

Query: 67  SLNCVIAYAIGAYSYVILGS-----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           SL       +GAYS  +               L I V A ++   G+I+G+P L+ RGDY
Sbjct: 66  SLGHAGFMCVGAYSSALFSHIASDIPQVPRFILAILVGAAVAAVFGVIIGIPVLRLRGDY 125

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL-----YFLGTTVRSLIRFFRFPSSF 176
           LAI TL   EI +N++       +                      ++  +      + +
Sbjct: 126 LAIVTLAFGEIIKNLINILYVGIDDSGLHVATSSAALKLGTGGKQILKGALGISGTGALY 185

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
              + + + + + +  L+  I+  L  +    A    RDN+ A  S+   +   KL AF 
Sbjct: 186 KDVKHYFFPIGIVLVLLTLFIVQNLVNSRSGRAITATRDNRIAAESVGIDVTKFKLLAFT 245

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           VS+A  G+AG  +A +   +    F ++ +I+++  V+LGG+ +L     AT IL  + E
Sbjct: 246 VSAALAGVAGVLYAHNLSMLKVSGFDYNMSILILVYVVLGGIGNLRGSIIATVILYALPE 305

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           L  G   Y                  +  I L +++L 
Sbjct: 306 LLRGFANY---------------RMLIYAIVLIVMMLF 328


>gi|324991356|gb|EGC23289.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus sanguinis
           SK353]
          Length = 317

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 81/340 (23%), Positives = 147/340 (43%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     L ++  LL+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KINIFWLGLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  S    + ++ +   A+I+G   + +GLP+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLAGAIIAGIVALAVGLPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + ++I    +TNG AGI                                    +
Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++  + L   R+ I  +  ++R+++ A  S+       K++AF + +    +AG+
Sbjct: 161 YVFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F+  I ++ IV+ GG+ S++    A  +L  +  L   +      
Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGILNMLLQDV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                    +     +  +AL LV++ R   LL     S 
Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305


>gi|256043289|ref|ZP_05446224.1| high-affinity branched-chain amino acid transport system permease
           protein LIVH / high-affinity branched-chain amino acid
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|265989713|ref|ZP_06102270.1| branched-chain amino acid ABC transporter [Brucella melitensis bv.
           1 str. Rev.1]
 gi|263000382|gb|EEZ13072.1| branched-chain amino acid ABC transporter [Brucella melitensis bv.
           1 str. Rev.1]
 gi|326410550|gb|ADZ67614.1| branched-chain amino acid ABC transporter, ATP-binding protein
           [Brucella melitensis M28]
 gi|326553841|gb|ADZ88480.1| branched-chain amino acid ABC transporter, ATP-binding protein
           [Brucella melitensis M5-90]
          Length = 907

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 26/325 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A    L   L L    +  ++  + I I ++   +   +IV G  G +SL   + Y IG
Sbjct: 320 IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 379

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  ++    G+S W  + + A I+   GM++  P  + +G + ++A++   E+F+ + 
Sbjct: 380 GYT-GVILFNMGISPWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 438

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + +  +T G  G+ +  +L ++    R                     ++ GM  ++ +I
Sbjct: 439 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 484

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +RR+ +       R+ + A  +     +  +L A A+SSA   M G F A     I 
Sbjct: 485 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 544

Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P  MF  + +I +    ++GG+ +++       +L+ + E            L  F    
Sbjct: 545 PAAMFSLAFSIQIAMFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 600

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 +  + L LV+L   + ++ 
Sbjct: 601 ------VYGLVLILVVLFMPNGIMG 619



 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/294 (11%), Positives = 91/294 (30%), Gaps = 27/294 (9%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107
           + + A GL+++ G + +++         G +   ++ ++ GL  +  + +    +     
Sbjct: 18  FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 77

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +   L            A +  +      +I    +  G                  +  
Sbjct: 78  LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 126

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                    +       ++ LG   L  ++ L+L+ +    A R +  ++ A   +   +
Sbjct: 127 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGRAIRAVAQHRSAAELMGVNV 186

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
               +  F + +A +G+A    A      S     F        +V+LGG+ S+      
Sbjct: 187 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 244

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             I+  +  +                   +     ++     L+++++   L  
Sbjct: 245 ALIIGVIDTMSGYYIG-------------SDLREAVVFGIFLLILILKPSGLFG 285


>gi|323486966|ref|ZP_08092281.1| hypothetical protein HMPREF9474_04032 [Clostridium symbiosum
           WAL-14163]
 gi|323399738|gb|EGA92121.1| hypothetical protein HMPREF9474_04032 [Clostridium symbiosum
           WAL-14163]
          Length = 354

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 78/343 (22%), Positives = 148/343 (43%), Gaps = 24/343 (6%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M  +  ++   + I   L +   LL+ + +        +  + + +  YV+ A  L++ V
Sbjct: 1   MKSYKNKILIQNTITYALVIAAFLLIQILMAGGHINSLLKGILVPLCTYVILAVSLNLTV 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLP 113
           G LG LSL       +GA+S                L   + + V A+++ A G+++G+P
Sbjct: 61  GILGELSLGHAGFMCVGAFSGAFFTHVMAASIPNPQLRFIIALFVGAVVAAAFGILIGIP 120

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
            L+ +GDYLAI TL   EI +N++      T+          +  L       +      
Sbjct: 121 VLRLKGDYLAIVTLAFGEIIKNVINVLYVGTDASGIHISTKDVASLNLAEGGKVIIKGAQ 180

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
                 ++  + +   +  ++  I+L +  +    A   IRDN+ A  S+   I   KL 
Sbjct: 181 GITGTPKMATFTIGFILVLITLFIVLNMINSRTGRAIMAIRDNRIAAESIGINITKYKLL 240

Query: 234 AFAVSSAFIGMAGAFFAASRDR--ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           AF+VS+A  G+AG  +A +      +P  F ++ +I+++  V+LGG+ ++     A  IL
Sbjct: 241 AFSVSAALAGVAGVLYAHNLATLAATPKSFGYNMSIMILVFVVLGGIGNIRGSVIAAVIL 300

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
             + E+  G+N Y                  +  I L +++L+
Sbjct: 301 TLLPEMLRGLNNY---------------RMLIYAIVLIVMMLL 328


>gi|94309162|ref|YP_582372.1| inner-membrane translocator [Cupriavidus metallidurans CH34]
 gi|93353014|gb|ABF07103.1| ABC-type transporter, livM-like permease component [Cupriavidus
           metallidurans CH34]
          Length = 358

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 78/345 (22%), Positives = 145/345 (42%), Gaps = 23/345 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +R ++      +   +   + F+ +    ++ ++ ++    LI+ + A GL+I+ G
Sbjct: 18  QIFPIRQDR------IFFALLMAVAFVAIPFVGTEYWLSAILTPFLIFSLAALGLNILTG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-WLLIPVSAMISGACGMIMGLPSLKFRGD 120
             G LSL      A+GAY+      R       L   ++   +   G+  GLPSL+ +G 
Sbjct: 72  YAGQLSLGTAAFMAVGAYAAYNFQLRIEGIPVLLTFILAGASAAVVGVAFGLPSLRIKGF 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL         L K+  ++N  +   +               +        +   
Sbjct: 132 YLAVATLAAQFFVVWALTKFPWLSNNSSSGVI-------------TAQRLDLFGVAIDTP 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y  +LG+  + A I   L R+A   AW  +RD   A   +   ++  KL AFAVSS 
Sbjct: 179 VKKYLFVLGIVTVLALIAKNLVRSATGRAWMAVRDMDVAAEVIGIPLMRTKLLAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           + G+AGA +A      + PD F    +  ++ ++I+GG+ S+       A ++ +     
Sbjct: 239 YCGVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGSFLGAAFILLLPIFLD 298

Query: 300 GMNFYYFNSLLKFDCSFNMRH--TTLMVIALFLVILMRSHSLLRL 342
            +     +SL     +  + H    +    +   +++  H L RL
Sbjct: 299 NVLPALASSLHLPFTNATVSHIQLMVFGGLIIFFLIVEPHGLARL 343


>gi|299533434|ref|ZP_07046816.1| inner-membrane translocator [Comamonas testosteroni S44]
 gi|298718640|gb|EFI59615.1| inner-membrane translocator [Comamonas testosteroni S44]
          Length = 364

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 68/335 (20%), Positives = 133/335 (39%), Gaps = 24/335 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +   +   + +   +   L         Y+  + ++I+I  +FA  L I+VG  GL+
Sbjct: 27  RPIRAKSVWVAVVLPLAVAALLAAAQPFWSAYLSDLVVKIMILSIFALSLHILVGGAGLV 86

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           SL     + +GAY+ V    + G +  +++  +  +SG   +++G  SL+ +G Y  + T
Sbjct: 87  SLGHAAYFGLGAYAAVKAAGQDGSNFLVMLGAAVGVSGLYALLVGALSLRTKGVYFIMVT 146

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L         ++       G  GIY+  R       + S                  Y+V
Sbjct: 147 LAF-AQLAFFVVHDVGYFGGSDGIYLMQRPAIGALDMESSST--------------QYFV 191

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L    L  + I  LR +   +A   IR N++   +        KL+ F ++ A  G+AG
Sbjct: 192 VLAALVLVYAFIAMLRHSRFGHALAGIRVNEQRMRAAGFATYGYKLAGFVIAGALAGLAG 251

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
              AA    ++P++  +  +  V+ ++ILGG+ SL      T   + + EL         
Sbjct: 252 FLLAARDAVVNPELLAWHHSGEVLLMLILGGVGSLRGAVLGTITFVLLKELLST------ 305

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +        + I++  ++ +    L+ 
Sbjct: 306 ---HAIVGNAADHWQLTLGISIIALVALLPKGLVG 337


>gi|260564497|ref|ZP_05834982.1| urea ABC transporter [Brucella melitensis bv. 1 str. 16M]
 gi|260152140|gb|EEW87233.1| urea ABC transporter [Brucella melitensis bv. 1 str. 16M]
          Length = 907

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 26/325 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A    L   L L    +  ++  + I I ++   +   +IV G  G +SL   + Y IG
Sbjct: 320 IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 379

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  ++    G+S W  + + A I+   GM++  P  + +G + ++A++   E+F+ + 
Sbjct: 380 GYT-GVILFNMGISPWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 438

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + +  +T G  G+ +  +L ++    R                     ++ GM  ++ +I
Sbjct: 439 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 484

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +RR+ +       R+ + A  +     +  +L A A+SSA   M G F A     I 
Sbjct: 485 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 544

Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P  MF  + +I +    ++GG+ +++       +L+ + E            L  F    
Sbjct: 545 PAAMFSLAFSIQIAMFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 600

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 +  + L LV+L   + ++ 
Sbjct: 601 ------VYGLVLILVVLFMPNGIMG 619



 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/294 (11%), Positives = 92/294 (31%), Gaps = 27/294 (9%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107
           + + A GL+++ G + +++         G +   ++ ++ GL  +  + +    +     
Sbjct: 18  FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 77

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +   L            A +  +      +I    +  G                  +  
Sbjct: 78  LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 126

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                    +       ++ LG   L  ++ L+L+ +   +A R +  ++ A   +   +
Sbjct: 127 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGHAIRAVAQHRSAAELMGVNV 186

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
               +  F + +A +G+A    A      S     F        +V+LGG+ S+      
Sbjct: 187 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 244

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             I+  +  +                   +     ++     L+++++   L  
Sbjct: 245 ALIIGVIDTMSGYYIG-------------SDLREAVVFGIFLLILILKPSGLFG 285


>gi|325690655|gb|EGD32656.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus sanguinis
           SK115]
 gi|332362300|gb|EGJ40100.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus sanguinis
           SK1056]
          Length = 317

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 82/340 (24%), Positives = 148/340 (43%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     L ++  LL+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNIFWLGLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  S    + ++ + V A+I+G   + +GLP+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLVGAVIAGIVALAVGLPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + ++I    +TNG AGI                                    +
Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++  + L   R+ I  +  ++R+++ A  S+       K++AF + +    +AG+
Sbjct: 161 YVFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F+  I ++ IV+ GG+ S++    A  +L  +  L   +      
Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGILNMLLQDV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                    +     +  +AL LV++ R   LL     S 
Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305


>gi|239817899|ref|YP_002946809.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239804476|gb|ACS21543.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 358

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 77/320 (24%), Positives = 136/320 (42%), Gaps = 20/320 (6%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L  FL +      +Y  +    +LIY +   GL ++ G  G  S+        GAY+  
Sbjct: 27  LLAAFLVVAPWTIDEYWLAQLTFVLIYGIVGLGLMLLAGFTGQFSIGHAAFLGTGAYTQG 86

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +L    G+   + +  +A +S A G+++ LP+L+ +G YL IATL    I + +  +W+ 
Sbjct: 87  VLT-NLGVPFPIALLAAAALSAAVGVVVALPALRVKGIYLGIATLSFGFIVEEVFARWES 145

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G AG++V     F                  +      Y++ L +  L    IL L 
Sbjct: 146 VTGGNAGLHVKSPQLFGW---------------SLGSGNGFYFLCLVVAVLGTLGILNLL 190

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+    A+  IRD++ +  S+   +   K  +FA+S+A  G+ GA +A     ISPD F 
Sbjct: 191 RSPTGRAFVAIRDSEISAQSMGIHLARYKTMSFAISAALAGLGGALYAHKLSFISPDQFN 250

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
             ++I ++ +V++GG+ S+         LI + +L         + L             
Sbjct: 251 ILQSIDLLLMVVIGGLGSVHGAFLGAIFLIAMPQLIS----MGKDWLPAVIGQAPGLQGL 306

Query: 323 LMVIALFLVILMRSHSLLRL 342
           +  + L   +L     L   
Sbjct: 307 VYGVVLIAFVLFEPLGLYGR 326


>gi|225375070|ref|ZP_03752291.1| hypothetical protein ROSEINA2194_00693 [Roseburia inulinivorans DSM
           16841]
 gi|225213142|gb|EEG95496.1| hypothetical protein ROSEINA2194_00693 [Roseburia inulinivorans DSM
           16841]
          Length = 361

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 73/337 (21%), Positives = 133/337 (39%), Gaps = 24/337 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  K   I   + +V  +++   +        +  + + +  Y + A GL++ VG LG L
Sbjct: 14  KSTKDHIITFAMVIVVYIIVQTMITTGNMSSLMQGLLVPMCTYSIVAIGLNLCVGYLGEL 73

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLS-------IWLLIPVSAMISGACGMIMGLPSLKFRG 119
           S+       +GA+S          S         + I V  + +   G ++G+P L+ RG
Sbjct: 74  SIGHAGFMCVGAFSSAFCTKLLQDSIQNEVILFLIAIAVGTVAAAFFGFLIGIPVLRLRG 133

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           DYLAI TL   EI +N++       +     +       +  +   +           I 
Sbjct: 134 DYLAIVTLAFGEIIKNVINVLYIAKDENGFHFAISDGNKIELSEDGIWLINGAKGIAKIP 193

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
            +  +   + M  +   I+     +    A   IRDN+ A  S+   I   KL AF +S+
Sbjct: 194 HLSSFTAGVIMILVILFIVYNFVNSRTGRAVMAIRDNRIAAESVGINITKFKLMAFTISA 253

Query: 240 AFIGMAGAFFAASRDRI--SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           A  G  G  +A +   +  +P  F ++ +I+++  V+LGGM S      A  IL  + E+
Sbjct: 254 AIAGAGGVLYAHNLSTVTATPTNFGYNMSIMILVFVVLGGMGSFRGSIIAAVILTLLPEV 313

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
             G+  Y                  +  I L +++L 
Sbjct: 314 LRGLKDY---------------RMLIYSIVLIVMMLF 335


>gi|324993709|gb|EGC25628.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus sanguinis
           SK405]
 gi|324994978|gb|EGC26891.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus sanguinis
           SK678]
 gi|327462979|gb|EGF09300.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus sanguinis
           SK1]
 gi|327474582|gb|EGF19987.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus sanguinis
           SK408]
 gi|327490140|gb|EGF21928.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus sanguinis
           SK1058]
          Length = 317

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 81/340 (23%), Positives = 147/340 (43%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     L ++  LL+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNIFWLGLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  S    + ++ +   A+I+G   + +GLP+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLAGAIIAGIVALAVGLPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + ++I    +TNG AGI                                    +
Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++  + L   R+ I  +  ++R+++ A  S+       K++AF + +    +AG+
Sbjct: 161 YVFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F+  I ++ IV+ GG+ S++    A  +L  +  L   +      
Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGILNMLLQDV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                    +     +  +AL LV++ R   LL     S 
Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305


>gi|305431963|ref|ZP_07401130.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Campylobacter coli JV20]
 gi|304445047|gb|EFM37693.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Campylobacter coli JV20]
          Length = 346

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 77/359 (21%), Positives = 132/359 (36%), Gaps = 47/359 (13%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L  +   + F+ L       Y   +  QI IY+  A   +++ G  G  SL      
Sbjct: 6   ISALVYIVLAIAFIMLAPQFFDGYGIGILNQIAIYITLAVSYNLINGVTGQFSLEPNGFI 65

Query: 75  AIGAYSYV--------------------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
           A+GAY+                      I+ + +  S  L + V+   +    +I+    
Sbjct: 66  AVGAYAAALVLLSSEQKLDLFSLEDPNPIILALHTNSFILALLVAGFSACVLSLILAFAV 125

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
            + RGDYLAI TL    I Q + I +   TNG  G+     L                  
Sbjct: 126 FRVRGDYLAIVTLGFGIIIQKLAINFPSWTNGSMGLNGIPLLSN---------------- 169

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                     Y   G+  +S  +IL L  +    A + IRD++ A  ++     + K  A
Sbjct: 170 ---------LYWTGGVAIISVILILNLVYSKFGRAMQAIRDDEDAASAMGVNTFWTKTLA 220

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F  S+   G+ G         +SP+ F F    +++ I++LGG+ S +       ++IG 
Sbjct: 221 FGTSAFLEGVGGGLLVCLLASVSPEQFGFEFTFMLLIIIVLGGLGSTTGAILGAILIIGG 280

Query: 295 VELCCGMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            E    ++        L     S       +  + L LV+L     +   R  ++F +R
Sbjct: 281 REWLRFLDEMQIKIDFLGIDMGSMPGLRMVVFSLILILVMLFARRGIFGDRELNSFFKR 339


>gi|316935097|ref|YP_004110079.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315602811|gb|ADU45346.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 328

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 70/311 (22%), Positives = 126/311 (40%), Gaps = 24/311 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
                Y+ ++ +  L+Y   +   +I+ G  G +SL   + + +GAY+  +L ++ G+  
Sbjct: 29  FVKDVYVQNIMVLTLMYAALSQAWNILGGYCGQISLGHALYFGLGAYTTALLFTKLGVLP 88

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           W  +    +IS    + +G P+ + RG Y  IAT++++EI   +   W            
Sbjct: 89  WFGMLGGGIISSVIALALGYPTFRLRGHYFVIATIVIAEIGFLLFHNWDWAGAALGIDIP 148

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                +                     ++  YY  L  C L+  I  WL+ +     WR 
Sbjct: 149 VRGDSWAKFQFTR-------------SKLPYYYFALVFCCLAWLITWWLQDSKWGYWWRA 195

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVIS 271
           ++DN +A  SL   +  +K+ A AVS+    + G+F+A     I P+    F  ++++  
Sbjct: 196 VKDNPEAAESLGVVVFNSKMGAAAVSAFLTAVGGSFYAMFVSYIDPESVMTFQFSLLMAL 255

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             +LGG+ +L       AILI + EL           +             L    + L+
Sbjct: 256 PAVLGGIGTLWGPVLGAAILIPLTELTRSFVGGSGRGV----------DLILYGSVIVLI 305

Query: 332 ILMRSHSLLRL 342
            L R   LL L
Sbjct: 306 SLARPEGLLGL 316


>gi|291279455|ref|YP_003496290.1| branched-chain amino acid ABC transporter permease [Deferribacter
           desulfuricans SSM1]
 gi|290754157|dbj|BAI80534.1| branched-chain amino acid ABC transporter, permease [Deferribacter
           desulfuricans SSM1]
          Length = 279

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 71/312 (22%), Positives = 128/312 (41%), Gaps = 41/312 (13%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
             +     Y   +     I ++   GL+++ G  G LSL      ++GAY   +L  +  
Sbjct: 3   FLSFFQNDYFLQIATMTCINIVIVLGLNLITGVTGQLSLGHAAFMSLGAYCSALLALKLN 62

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +  W+ +    + +G  G ++G+P L+ RGDYLAIATL   EI + +++           
Sbjct: 63  MPFWVCVSAGTLFAGIMGALLGIPILRLRGDYLAIATLGFGEIVRVVILN---------- 112

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                                R    + I +   +++ L    L    +     +    A
Sbjct: 113 ----------------TPIAGRALGLYAIPQYTTFFIALLAVILGIIFMYRFENSRHGLA 156

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R+IR+++ A   +   I   K+ AFAV SAF G+ G+ +A     I+P+ F F ++I  
Sbjct: 157 LRSIREDEIAAEMMGVDIAKYKILAFAVGSAFAGLGGSLYAHFLTYINPNDFGFMKSIEQ 216

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           + +++LGGM S++  A    +L  V EL    + Y                     + L 
Sbjct: 217 LCMLVLGGMGSITGAAAGAVVLSTVPELLRFASEY---------------RMVTYGVVLI 261

Query: 330 LVILMRSHSLLR 341
           ++++ R   L  
Sbjct: 262 VMMIFRPQGLFG 273


>gi|237739397|ref|ZP_04569878.1| branched chain amino acid ABC transporter permease [Fusobacterium
           sp. 2_1_31]
 gi|229423005|gb|EEO38052.1| branched chain amino acid ABC transporter permease [Fusobacterium
           sp. 2_1_31]
          Length = 326

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 75/335 (22%), Positives = 139/335 (41%), Gaps = 45/335 (13%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            + +V   +LF  + +    +Y   + I ILI V+ A  L+I VG LG ++L      +I
Sbjct: 14  AILLVLYFILFSLINSGFISRYQIGIIILILINVILAASLNITVGCLGQITLGHAGFMSI 73

Query: 77  GAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           GAY+  +L             + + V  +++G  G I+G+P+L+  GDYLAI TL   EI
Sbjct: 74  GAYTAALLTKSGFLSGYPGYIVALIVGGIVAGIIGFIIGIPALRLTGDYLAIITLAFGEI 133

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            + +LI++   T G  G+    R+                             ++  +  
Sbjct: 134 IR-VLIEYFKFTGGAQGLTGIPRVNNFT-------------------------LIYFITI 167

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            S   +  +  +    A   IR+++ A  +      + K  AF +S+ F G+AG  +A +
Sbjct: 168 FSVIFMYSIMTSRHGRAVLAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGGIYAHN 227

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              +    F ++ +I ++ +V+LGGM S +    +  +L  + E+      Y        
Sbjct: 228 LGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAIVLTILPEVLRSFAEY-------- 279

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                     +  + L +++L R   LL  +    
Sbjct: 280 -------RMIVYPLILIIMMLFRPEGLLGRKEFQI 307


>gi|167770567|ref|ZP_02442620.1| hypothetical protein ANACOL_01913 [Anaerotruncus colihominis DSM
           17241]
 gi|167667162|gb|EDS11292.1| hypothetical protein ANACOL_01913 [Anaerotruncus colihominis DSM
           17241]
          Length = 336

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 66/325 (20%), Positives = 126/325 (38%), Gaps = 30/325 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +      ++   L    S  YI  +G  I I ++ A G+  V G  G +++     Y IG
Sbjct: 16  ILTGMFAIIICLLPLIFSSDYIIHIGCMIGINILLALGMHFVTGLAGQINMGQYGFYCIG 75

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  +L ++  L     + V+  IS A GM++G+P+LK  G YL++ T+  +E  + ++
Sbjct: 76  AYAGALLTTKGELGFVPSLIVTIAISAAFGMLVGIPALKVEGPYLSLCTIGFAESVR-LV 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I     +N   GI    +L   G T+++                  Y+ +     +   I
Sbjct: 135 INSAGWSNKSNGIMRIPKLEIFGWTMQTKTM--------------SYFFIFVFVLIGLII 180

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +     +     +  I+D+  A   +   +   K+ AF + + F G+AG  +A     I 
Sbjct: 181 VTNFVNSNYGRRFSAIKDDPLAASVMGVNVRKVKIMAFVLCAIFAGVAGCLYANYAGYIH 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F  +     + +++LGG+ S         ++  V E       Y             
Sbjct: 241 PTTFVQALQTNFLLMIVLGGLGSTWGSVLGATLITVVYEYTRVYAEY------------- 287

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                   + + L +L     ++  
Sbjct: 288 --QKIAFGVVMILTVLFLQRGIVGT 310


>gi|221069669|ref|ZP_03545774.1| inner-membrane translocator [Comamonas testosteroni KF-1]
 gi|220714692|gb|EED70060.1| inner-membrane translocator [Comamonas testosteroni KF-1]
          Length = 364

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 68/335 (20%), Positives = 133/335 (39%), Gaps = 24/335 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +   +   + +     + L         Y+  + ++I+I  +FA  L I+VG  GL+
Sbjct: 27  RPIRAHSVWVGVVLPLAAAVLLAAAQPFWSAYLSDLVVKIMILSIFALSLHILVGGAGLV 86

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           SL     + +GAY+ V    + G +  +++  +  +SG   +++G  SL+ +G Y  + T
Sbjct: 87  SLGHAAYFGLGAYAAVKAAGQDGSNFLVMLGAAVGVSGLYALVVGALSLRTKGVYFIMVT 146

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L         ++       G  GIY+  R       + S                  Y+V
Sbjct: 147 LAF-AQLAFFVVHDVGYFGGSDGIYLMQRPAIGALDMESSS--------------TQYFV 191

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L    L  + I  LR +   +A   IR N++   +        KL+ F ++ A  G+AG
Sbjct: 192 VLAALVLVYAFIAMLRHSRFGHALAGIRVNEQRMRAAGFATYGYKLAGFVIAGALAGLAG 251

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
              AA    ++P++  +  +  V+ ++ILGG+ SL      T   + + EL         
Sbjct: 252 FLLAARDAVVNPELLAWHHSGEVLLMLILGGVGSLRGAVLGTITFVLLKELLST------ 305

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +        + +A+  ++ +    L+ 
Sbjct: 306 ---HAIVGNAADHWQLTLGLAIIALVALLPKGLVG 337


>gi|16265264|ref|NP_438056.1| short-chain amide/branched-chain amino acid uptake ABC transporter
           permease [Sinorhizobium meliloti 1021]
 gi|15141404|emb|CAC49916.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
          Length = 537

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 94/297 (31%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++      S   L   S  I+     ++ 
Sbjct: 258 AAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLFEWSLAIALPLAFLVT 317

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       +   +     + +L  W      +  +              S      
Sbjct: 318 GAVGLALER--GVIRFLYGRPLETLLATWGISLILQQTVRTIFGPTNREVGNPSW-MSGA 374

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++++    + A+++  L++T +    R +  N++   S+     +  
Sbjct: 375 FELGGLAITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQNRRMASSMGIRTPWVD 434

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              FA+ S   G+AG   A S+             I    +V+ GG+ +L         L
Sbjct: 435 ALTFALGSGIAGIAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLVGAFSL 492

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             + +                          L+++ + L I  R   L  L+  +  
Sbjct: 493 GILNKFLEPYAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 536


>gi|91975996|ref|YP_568655.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91682452|gb|ABE38754.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 309

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 55/316 (17%), Positives = 116/316 (36%), Gaps = 30/316 (9%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             +   +  ++ I  +   GL++++G  G +SL     + IGAY+  IL + +       
Sbjct: 24  NAFYFDIVNRMAINAVIVLGLNLLIGFAGQISLGHAGFFGIGAYASAILTTHFSWPPLAA 83

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + V A+ +    + +  P  + RG YLA+ATL +  +   +L      T G  G+ V   
Sbjct: 84  LAVGAVGAALLALAIAPPIFRLRGHYLAMATLGLGIVISIVLKNEAAYTGGPDGMSVPPL 143

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
             F                         Y++   +   S      L  +    A R +  
Sbjct: 144 TLFGFEIYGERQW---------------YWLFAAILLFSVWACQNLIDSPFGRALRALHG 188

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A   +   +   K++ F +S+ F  + G+  A     ++P+  +F  +I ++++V++
Sbjct: 189 SEVASQVVGVDVARYKVAIFVLSAFFASIMGSLSAHYVGFVTPNAAEFLHSIELMTMVVV 248

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S+        +L  + +                        T    + L + ++  
Sbjct: 249 GGMASVYGSVIGAVLLTALPQALATFEG---------------WETVAFGVILMVSMIFL 293

Query: 336 SHSLLRLRTPSNFLER 351
              L+         +R
Sbjct: 294 PKGLVPTIAAKLGRKR 309


>gi|309802606|ref|ZP_07696710.1| branched-chain amino acid ABC transporter, permease protein
           [Bifidobacterium dentium JCVIHMP022]
 gi|308220670|gb|EFO76978.1| branched-chain amino acid ABC transporter, permease protein
           [Bifidobacterium dentium JCVIHMP022]
          Length = 363

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 77/351 (21%), Positives = 141/351 (40%), Gaps = 42/351 (11%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           L + +   +  +   V   LL        +  Y+  + +   I V+    L++ +G LG 
Sbjct: 6   LSIKQSYLVCAIGVAVLFGLLMAVCETGVASLYVKGIIMTCCIAVIMTTSLNLTIGVLGQ 65

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLS---------IWLLIPVSAMISGACGMIMGLPSLK 116
           L+L C    AIGAYS  +L      +           L+     +++   G+++G+P+L+
Sbjct: 66  LTLGCCGFEAIGAYSAALLSKLLVANGVQMDATLRFLLVTFAGGVVACIFGILVGIPALR 125

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
             GDYLAI TL   EI + I+   K                      + L    +  +  
Sbjct: 126 LHGDYLAIITLGFGEIIRVIIQNLKVAGG------------------KGLSEGQQGQALI 167

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
            I  +   YV+  +  ++  ++    R+    A + IRD++ A  +    I + K+  FA
Sbjct: 168 GIDRLANLYVVFWITVVTVVLLFMFARSRYGRAVKAIRDDEIAAGASGINITYLKVMVFA 227

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           +S+ F G+AG  FA     ++P M  + ++I  + +V+ GGM SL+    A   L  + E
Sbjct: 228 ISAFFAGIAGGIFAQYIGALTPSMAGWLQSINYVIMVVFGGMGSLTGSIVAAVGLTILPE 287

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
           L    + Y                  +  + L L+++ R   +      S 
Sbjct: 288 LLRAFSEY---------------RMLVYSVVLVLIMVFRPQGIFGNWEFSL 323


>gi|56477446|ref|YP_159035.1| putative branched-chain amino acid transport system protein
           [Aromatoleum aromaticum EbN1]
 gi|56313489|emb|CAI08134.1| putative branched-chain amino acid transport system protein
           [Aromatoleum aromaticum EbN1]
          Length = 600

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/333 (13%), Positives = 108/333 (32%), Gaps = 31/333 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++   L  L +       +  ++   I +Y + A GL ++ G  GL S        +GA
Sbjct: 9   LILGVFLAVLAVAPLVLSPFYVTLLNYIGLYALVALGLVLLTGVGGLTSFGQAAFVGLGA 68

Query: 79  YSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
           Y+  +           +  G S WL + V  + +    +++G  +L+  G YL + T+  
Sbjct: 69  YTTAVLTTATELPGWLAWAGGSPWLALVVGLVFTAVVALVLGSLTLRLSGHYLPLGTIAW 128

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 +      +  G  G+     +   G  +                   ++Y++  
Sbjct: 129 GISLYFLFGTLDTL-GGHTGLTGVPPITVFGFELDRGEE--------------LFYLIWL 173

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
               +      L  +    A R ++       ++      +++  F +++     +G  +
Sbjct: 174 FLLSAVFTTQNLLDSREGRAIRALKGGMVMAEAMGVNTARSRMIIFVIAALHACASGWLY 233

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A  +  ++P  F     I  + + ++GG   +        ++    +    +    F   
Sbjct: 234 AHLQRFVNPTPFGLHIGIEYLFMAVVGGAGQVWGALVGAGVITIAKQWLQDVLPRIFGQS 293

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             F             + + +V+      L  L
Sbjct: 294 GNF-------EVIFFGLMMVIVLQRARDGLWPL 319


>gi|157370790|ref|YP_001478779.1| inner-membrane translocator [Serratia proteamaculans 568]
 gi|157322554|gb|ABV41651.1| inner-membrane translocator [Serratia proteamaculans 568]
          Length = 370

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 97/352 (27%), Positives = 160/352 (45%), Gaps = 17/352 (4%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + +   L ++  +  LLL  ++  +    Y   +    L+Y+M A GL+IVVG  GLL +
Sbjct: 12  SPHRARLGVVLFMLGLLLAPWVAGSVGGNYWVRVIDFALLYLMLALGLNIVVGLTGLLDM 71

Query: 69  NCVIAYAIGAYSYVILGSRY----------------GLSIWLLIPVSAMISGACGMIMGL 112
             +  YA+GAY   +L S +                 LSI LLIP++A+++  CG+++G 
Sbjct: 72  GFIAFYAVGAYLTALLSSPHLTQQFPLLLQWFPEGLHLSILLLIPLAAVLAALCGILLGA 131

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
           P+L+ RGDYLAI TL   EI + ++       N   G      +  +            +
Sbjct: 132 PTLRLRGDYLAIVTLGFGEIVRILMRNLDRPLNITNGPKGISAIDPVTLFGLKFSGMHSW 191

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
                      YY+   +  L   + L L+ + +  AW  IR+++ A  ++       KL
Sbjct: 192 FGIRFSSLYLYYYLFAALLLLILFVCLRLQHSRVGRAWTAIREDEDAARAMGINTRNFKL 251

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
            AFA+ + F G+AGA FAA +  +SP+ F   E+I V+++V+LGGM  +  +     +L 
Sbjct: 252 LAFAIGATFGGVAGALFAAFQGFVSPESFTLQESIAVLAMVVLGGMGHIPGVILGALLLA 311

Query: 293 GVVELCCGMNFYYFNSLLK-FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            + EL          +L         +       +AL LV+L R   L   R
Sbjct: 312 ALPELLRSTMGPLQQALFGQVWIDPEIIRQLFYGLALILVMLYRPAGLWPAR 363


>gi|325694984|gb|EGD36888.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus sanguinis
           SK150]
          Length = 317

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 81/340 (23%), Positives = 148/340 (43%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     L ++  LL+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KINIFWLGLVLIGYLLMTVLVSAGVLNAFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  S    + ++ + + A+I+G   + +GLP+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYAVAIIGSKSPTYGAFFIAMLLGAVIAGIVALAVGLPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + ++I    +TNG AGI                                    +
Sbjct: 126 GVSEIIRILIINGGTLTNGAAGILSIPPFTSWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++  + L   R+ I  +  ++R+++ A  S+       K++AF + +    +AG+
Sbjct: 161 YIFVVITTILTLNFLRSPIGRSTLSVREDEIAAESVGVNTTRIKVTAFVLGAITASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F+  I ++ IV+ GG+ S++    A  +L  +  L   +      
Sbjct: 221 LQAGFVGSVVPKDYSFTNTINILIIVVFGGLGSMTGTIVAAVVLGILNMLLQDV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                    +     +  +AL LV++ R   LL     S 
Sbjct: 275 ---------SSIRMIVYSLALILVMIFRPGGLLGTWELSL 305


>gi|300811660|ref|ZP_07092136.1| amino acid or sugar ABC transport system, permease protein
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497361|gb|EFK32407.1| amino acid or sugar ABC transport system, permease protein
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 324

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 73/339 (21%), Positives = 139/339 (41%), Gaps = 43/339 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           KY+    +L V    L+   + A     +I++M + I I ++ A GL++V+G  G  SL 
Sbjct: 6   KYNLCWLILMVAGFYLINTLMLAGVINTFIENMLVTIGINIILAVGLNLVIGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                A+GAY+  I+      +   +L + V  +IS    +++G+P+L+  GDY AIAT+
Sbjct: 66  HAGFMALGAYATGIMTQTMNTAGGFYLSVLVGVVISIVVALLVGIPTLRLHGDYFAIATM 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +EI + ++   K          +     +                           V+
Sbjct: 126 GAAEIIRIVINNMKITNGAAGLFNIPQFATWD--------------------------VV 159

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                L+  + +    +    A  +IR+N+ A  ++       KLSAF + +A   +AG+
Sbjct: 160 YIFVCLTTIVTVNFIHSRDGRAVISIRENEIAAEAMGVNTTKWKLSAFVLGAATAAIAGS 219

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A+    I P  F   E+I ++  V+LGG+ S++    AT +L  +      +      
Sbjct: 220 LYASYLQTIVPSTFGIMESINILIFVVLGGLGSITGTFVATTLLGVLDAALQSL------ 273

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                     +       +AL ++++ +   L      S
Sbjct: 274 ---------GVLRMVFYAVALIIIMIFKPGGLFGKWEFS 303


>gi|284047403|ref|YP_003397742.1| inner-membrane translocator [Acidaminococcus fermentans DSM 20731]
 gi|283951624|gb|ADB46427.1| inner-membrane translocator [Acidaminococcus fermentans DSM 20731]
          Length = 326

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 73/349 (20%), Positives = 137/349 (39%), Gaps = 41/349 (11%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M      L+K D +   + V+  ++ +          Y ++  I ILI ++ A  L+++ 
Sbjct: 1   MKSLRQSLHKQDLLGLGIMVILFVVFYFLFDEEILDDYWETNVILILINIIMAVSLNLIN 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G  S+      A+GAY+  I+  + G+   + + V+ + +   G ++G+P+L+  GD
Sbjct: 61  GLTGQFSIGHAGFMAVGAYTSAIITVKLGMDFPIALIVATVSAAFLGFLIGMPTLRLNGD 120

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLAIATL + EI +  ++    +  G +G     RL                        
Sbjct: 121 YLAIATLGLGEIIRIAILNIDYV-GGASGFMGIPRLTTFP-------------------- 159

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
                +   +       I   + +A   A   IR+N+ A  ++       K+ AF + + 
Sbjct: 160 -----IAFWIMVFVVYFIKNFKNSADGRACLAIRENEIAAETMGINTTKYKVMAFTIGAG 214

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           F G AGA F+       P  F F  +  V+++V+LGG+ S+S       +L  +      
Sbjct: 215 FAGTAGALFSHYYYIAHPASFTFMRSFDVLTMVVLGGLGSISGSISGAVLLTAISAALAD 274

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
                                 +  I L +++L R   +   +  S  +
Sbjct: 275 Y---------------PEWRMVIYSIVLIVLMLNRPQGIFGNKELSLKM 308


>gi|316933491|ref|YP_004108473.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315601205|gb|ADU43740.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 406

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 66/346 (19%), Positives = 125/346 (36%), Gaps = 15/346 (4%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           +K+  I  L+     + L   +       Y   +  +  IY +FA G +I+ G  G LS 
Sbjct: 5   SKFADIALLIGFAVMVALGPIIFTPIGAGY-PDLLQKFAIYGIFAIGFNILFGLTGYLSF 63

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                  +G+Y+ V       + +   +  S +++G   + +G  SL+  G Y +I TL 
Sbjct: 64  GHAAFLGVGSYAAVWSFKLVSMELLPAVAFSVVLAGILALAIGFVSLRRSGIYFSILTLA 123

Query: 129 MSEIFQNILIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +++  N+      PITNG+ G+ V      +                  I     +Y+ 
Sbjct: 124 FAQMCYNMAYSVLTPITNGETGLRVLRDDPRVLDAAIGYASPMPSLFGLTITGWTGFYIC 183

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +   +  + + + R+      R I+ NQ        +     LSAF +S  F G+AGA
Sbjct: 184 GAVLVAAFGLSIAIFRSPFGMTLRAIKSNQNRMGYTGYSTRPYLLSAFVISGMFAGLAGA 243

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             AA+      +  +++ +  V+ + ILGG  +L      T I+     +    N     
Sbjct: 244 LLAATDPLAGAERMQWTASGEVVLMTILGGAGTLLGPVVGTGIIKYFENIFSAYNDQQLA 303

Query: 308 SLLKF-------------DCSFNMRHTTLMVIALFLVILMRSHSLL 340
               F                        + +    V++     ++
Sbjct: 304 KFFAFLPDGFREGVVSVTSLFVGEGWHLTLGLLFMAVVIFLPGGVM 349


>gi|297190909|ref|ZP_06908307.1| branched-chain amino acid ABC transporter permease [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|297150672|gb|EDY66612.2| branched-chain amino acid ABC transporter permease [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 419

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 64/324 (19%), Positives = 126/324 (38%), Gaps = 16/324 (4%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY---------- 81
                ++    G+  +   + A G++++ G+ G LS+      AIGAY Y          
Sbjct: 91  PFYLDRFWLQAGLFAMAAAIGAIGINLLTGATGQLSMGHAFFLAIGAYGYCVLAGGNDVE 150

Query: 82  -VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                   GL  WL   ++ +++G  G +    + + RG YL IATL +  + Q++L   
Sbjct: 151 SGHELVGLGLPTWLAAVLAVLLAGLAGGVFSPIAGRLRGAYLGIATLALIFVGQHVLFNA 210

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T G  G  V     F      S +     P   +     ++Y  L    +       
Sbjct: 211 RDLTGGFNGRSVPPLSLFGFEFDDSELLVAAVPFQSMEK---LWYAALVALLVCGLFARG 267

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           + R     A   +RD++ A   +   +   + + F +SS + G+AG   A    R  P+ 
Sbjct: 268 VLRGRPGRAMNALRDHRIAAGVMGVPVARYRAAVFVLSSMYAGLAGVLLALIFQRTVPEY 327

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--YYFNSLLKFDCSFNM 318
           F    ++  ++++++GG+ S++        +  + ++    +      ++      S   
Sbjct: 328 FGMILSLEYLAMIVIGGLGSVAGAVVGAIFVSLLPQVLTRWSDALPLVSAPGTGGVSPGE 387

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
               L   A+  V+L     L RL
Sbjct: 388 ASRYLYGAAVVAVVLFLPGGLTRL 411


>gi|256111710|ref|ZP_05452694.1| high-affinity branched-chain amino acid transport system permease
           protein LIVH / high-affinity branched-chain amino acid
           [Brucella melitensis bv. 3 str. Ether]
          Length = 907

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 26/325 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A    L   L L    +  ++  + I I ++   +   +IV G  G +SL   + Y IG
Sbjct: 320 IAFCVLLASLLLLPLAINNAFVSHIFITICLFAALSTAWNIVGGFAGQMSLGHAVFYGIG 379

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  ++    G+S W  + + A I+   GM++  P  + +G + ++A++   E+F+ + 
Sbjct: 380 GYT-GVILFNMGISPWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLA 438

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + +  +T G  G+ +  +L ++    R                     ++ GM  ++ +I
Sbjct: 439 LHFGWLTGGATGLMIQLKLGWVWMVFRERW--------------PSLLIVFGMLLVTLAI 484

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +RR+ +       R+ + A  +     +  +L A A+SSA   M G F A     I 
Sbjct: 485 TWAVRRSRLGFYLVATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIE 544

Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P  MF  + +I +    ++GG+ +++       +L+ + E            L  F    
Sbjct: 545 PAAMFSLAFSIQIAMFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF---- 600

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 +  + L LV+L   + ++ 
Sbjct: 601 ------VYGLVLILVVLFMPNGIMG 619



 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/294 (11%), Positives = 91/294 (30%), Gaps = 27/294 (9%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107
           + + A GL+++ G + +++         G +   ++ ++ GL  +  + +    +     
Sbjct: 18  FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 77

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +   L            A +  +      +I    +  G                  +  
Sbjct: 78  LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 126

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                    +       ++ LG   L  ++ L+L+ +    A R +  ++ A   +   +
Sbjct: 127 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGRAIRAVAQHRSAAELMGVNV 186

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
               +  F + +A +G+A    A      S     F        +V+LGG+ S+      
Sbjct: 187 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 244

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             I+  +  +                   +     ++     L+++++   L  
Sbjct: 245 ALIIGVIDTMSGYYIG-------------SDLREAVVFGIFLLILILKPSGLFG 285


>gi|260426288|ref|ZP_05780267.1| high-affinity branched-chain amino acid transport system permease
           protein livh [Citreicella sp. SE45]
 gi|260420780|gb|EEX14031.1| high-affinity branched-chain amino acid transport system permease
           protein livh [Citreicella sp. SE45]
          Length = 598

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 64/329 (19%), Positives = 130/329 (39%), Gaps = 26/329 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+AV   L   + +      +++  + I I I+   +   +IV G  G LSL   I Y
Sbjct: 19  LGLIAVAVLLAGLVAVPVAVGDQFVYHIFITICIFAALSTAWNIVGGYAGQLSLGHAIFY 78

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IG Y+  ++    G+S W+ +   A ++    +++  P  +  G + A+AT+   E+F+
Sbjct: 79  GIGGYA-GVILVNLGISPWIGMFAGAAVAVVAAIVVSWPCFRLHGPFFALATIAFLEVFR 137

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + + ++ +T G  G+ +  ++ +     R                +    +  GM  + 
Sbjct: 138 VLALHFRELTGGATGLMIPLKIGWEWMVFRER--------------LPALLIAFGMLLVC 183

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++   +R   +       R+ + A  +     +  +L A AVS+A   M G F A    
Sbjct: 184 LAVAWAIRSHRLGFYLVATRERESAAKAAGVGTVKVRLMAVAVSAALSAMVGTFHAMYLT 243

Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
            I P+ MF    +I +    ++GG+ ++        +L+ + E   G        L  F 
Sbjct: 244 FIEPESMFSLQFSIQIAMFALIGGIGTVWGPLLGAMLLVPITEFARGALGSEAIGLHGFV 303

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +    L +           + ++ L
Sbjct: 304 YGVVLMLVVLFL----------PNGIMGL 322


>gi|148254334|ref|YP_001238919.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146406507|gb|ABQ35013.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 334

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 65/313 (20%), Positives = 124/313 (39%), Gaps = 24/313 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                  Y+ ++ +  L+Y   +   +I+ G  G +SL   + + +GAY+  IL +++G+
Sbjct: 27  PLFVKDVYVQNIMVLTLMYAALSQSWNILSGYCGQISLGHALYFGLGAYTTAILFTKFGV 86

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +    +IS    M +G P  +  G Y  IAT++++EI   +   W          
Sbjct: 87  LPWFGMLAGGLISALIAMALGYPCFRLGGHYFVIATIVIAEITLLLFQNWDWAGAALGID 146

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R  +L                    ++  +Y  L +  ++  +  WL  +     W
Sbjct: 147 IPVRRDSWLTFQFTR-------------SKLPYFYFALALACVAWFVTWWLEDSKWGYWW 193

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIV 269
           R ++DN  A  SL   +  +K+ A AVS+  + + G+F+A     I P+    F  ++++
Sbjct: 194 RAVKDNPVAAESLGVDVFNSKMGAAAVSAFLVAIGGSFYAQFVSYIDPESVMGFQFSLLM 253

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
               +LGG+ +L        ILI + EL           +             +    + 
Sbjct: 254 ALPAVLGGIGTLWGPMLGAVILIPLTELTRSYIGGSGRGV----------DLIVYGGLII 303

Query: 330 LVILMRSHSLLRL 342
            + L R   L+ L
Sbjct: 304 AISLARPQGLVSL 316


>gi|307301511|ref|ZP_07581271.1| urea ABC transporter, permease protein UrtB [Sinorhizobium meliloti
           BL225C]
 gi|306903568|gb|EFN34156.1| urea ABC transporter, permease protein UrtB [Sinorhizobium meliloti
           BL225C]
          Length = 537

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 94/297 (31%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++      S   L   S  I+     ++ 
Sbjct: 258 AAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLFEWSLAIALPLAFLVT 317

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       +   +     + +L  W      +  +              S      
Sbjct: 318 GAVGLALER--GVIRFLYGRPLETLLATWGISLILQQTVRTIFGPTNREVGNPSW-MSGA 374

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++++    + A+++  L++T +    R +  N++   S+     +  
Sbjct: 375 FELGGLAITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQNRRMASSMGIRTPWVD 434

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              FA+ S   G+AG   A S+             I    +V+ GG+ +L         L
Sbjct: 435 ALTFALGSGIAGIAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLVGAFSL 492

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             + +                          L+++ + L I  R   L  L+  +  
Sbjct: 493 GILNKFLEPYAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 536


>gi|319796244|ref|YP_004157884.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315598707|gb|ADU39773.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 358

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 78/320 (24%), Positives = 138/320 (43%), Gaps = 20/320 (6%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L+ FL       ++Y  +    +LIY +   GL ++ G  G  S+        GAY+  
Sbjct: 27  LLIAFLIAAPWVIEEYWLAQLTFVLIYGIVGLGLMLLAGFTGQFSIGHAAFLGAGAYTQG 86

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +L    G+   + +  +A +S A G+++ LP+L+ +G YL IATL    I + +  +W+ 
Sbjct: 87  VLT-NLGVPFPIALIAAAALSAAVGVVVALPALRVKGIYLGIATLSFGFIVEEVFARWES 145

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G AG++V     F  +                      Y++ L +  LS   IL L 
Sbjct: 146 VTGGNAGLHVKSPQLFGWSLGSGDG---------------FYFLCLVVAVLSTLGILNLL 190

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+    A+  IRD++ +  S+   +   K  +FA+S+A  G+ GA +A     ISPD F 
Sbjct: 191 RSPTGRAFVAIRDSEISAQSMGIHLARYKTMSFAISAALAGLGGALYAHKLSFISPDQFS 250

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
             ++I ++ +V++GG+ S+         LI + +L         + L             
Sbjct: 251 ILQSIDLLLMVVIGGLGSVHGAFLGAIFLIAMPQLIS----MGKDWLPAVIGQAPGLQGL 306

Query: 323 LMVIALFLVILMRSHSLLRL 342
           +  + L   +L     L   
Sbjct: 307 VYGVVLIAFVLFEPLGLYGR 326


>gi|239623759|ref|ZP_04666790.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521790|gb|EEQ61656.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 357

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 76/329 (23%), Positives = 140/329 (42%), Gaps = 23/329 (6%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + +   +++ + +G       +  + +   IYV+ A  L++ VG LG LSL     
Sbjct: 15  ITYGIVIAAYIIMQVLVGTGHVSSLLKGLLVPFCIYVIMAVSLNLTVGILGELSLGHAGF 74

Query: 74  YAIGAYSYVILGS------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
             +GA++  +            LS+ + I + A  +   GM++G+P L+ RGDYLAI TL
Sbjct: 75  MCVGAFAGALFSKCMKGSINPTLSLVIAIVIGAAAAAVFGMLIGIPVLRLRGDYLAIVTL 134

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              EI +N++       +             L       I            +   + + 
Sbjct: 135 AFGEIIKNLVNAIYLGRDASGFHISFKDSMSLKLEEGGEILIKGAQGITGTPQAATFTIG 194

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +  ++  I++ L  +    A   IRDN+ A  S+   I   KL AF++S+   G+AG 
Sbjct: 195 VILVLITLFIVMNLVNSRTGRAIMAIRDNRIAAESIGINITKYKLLAFSISAGLAGVAGV 254

Query: 248 FFAASRDRISPD--MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
            +A +   ++     F ++ +I+++  V+LGG+ S+     AT IL  + E+  G++ Y 
Sbjct: 255 LYAHNLTTLTAQPKNFGYNMSIMILVYVVLGGIGSIRGSVIATVILYLLPEMLRGLSNY- 313

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILM 334
                            +  I L L +L 
Sbjct: 314 --------------RMLMYAIVLILAMLF 328


>gi|328957955|ref|YP_004375341.1| high-affinity branched-chain amino acid transport system permease
           protein [Carnobacterium sp. 17-4]
 gi|328674279|gb|AEB30325.1| high-affinity branched-chain amino acid transport system permease
           protein [Carnobacterium sp. 17-4]
          Length = 324

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 71/342 (20%), Positives = 143/342 (41%), Gaps = 42/342 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            NK +    +       L+ +         + +   + ILI ++ A GL++++G  G  S
Sbjct: 7   FNKKNLGWLIFIAAIYTLIQIGTTTGIINAFYEITLMTILINIILATGLNLIIGFSGQFS 66

Query: 68  LNCVIAYAIGAYSYVILGSRYG--LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           L      AIGAY   I+  +Y   L +   I +  +++    +++G+P+L+ +GDYLAIA
Sbjct: 67  LGHAGFMAIGAYCTGIISIKYPTVLGLIGGILLGIVVASIVALLVGIPTLRLKGDYLAIA 126

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL ++EI + +++    +TNG AG+     +                             
Sbjct: 127 TLGVAEIIRIVILNMDEVTNGAAGLSGIPFIANWQ------------------------- 161

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +      +S  I++   +++   A  +IR+++ A  S+       K+ AF + +A   +A
Sbjct: 162 ITFAFIIISMIILINYIKSSPGRATISIREDEIAAESMGINTTKYKIIAFVLGAASAAIA 221

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G   A+    I P  F F +++ ++ IV+ GG+ S++    A  +L  +           
Sbjct: 222 GGLHASYFSVIRPSDFTFMKSVDILIIVVFGGLGSMTGSVVAAIVLGILNVYLQ------ 275

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                     F      +  +AL  +++ +   LL  +  + 
Sbjct: 276 ---------PFGQLRMIIYSVALVAIMVFKPSGLLGTKEFTI 308


>gi|108759926|ref|YP_634780.1| putative branched chain amino acid ABC transporter permease
           [Myxococcus xanthus DK 1622]
 gi|108463806|gb|ABF88991.1| putative branched chain amino acid ABC transporter, permease
           protein [Myxococcus xanthus DK 1622]
          Length = 330

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 58/333 (17%), Positives = 115/333 (34%), Gaps = 13/333 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++   +L LF        +   +   + + ++ A  L+IV G  G  S+      A+GA
Sbjct: 1   MLLALPVLVLFQWLMSDAPFASYLLSVVGVNIILAVSLNIVNGMTGQFSIGHAGFMAVGA 60

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y   +L             V+               +      LA A         ++ +
Sbjct: 61  YISGVLSLNLK-------DVALSFLPVAVSDQVFFVVSLLVGGLAAALCGFLVGLPSLRL 113

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +   +     G     R+    T                   +  ++V L        + 
Sbjct: 114 RGDYLAIVTLGFGEIIRVVVQNTDAFGRALGLSGIPQTSSPAMVYFFVFLT-----VLVA 168

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +  ++   +   IR+++ A  ++       K+ AF +SS F G+AGA FA     I+P
Sbjct: 169 RRITGSSHGRSLWAIREDEVAAEAMGVDTTGYKVRAFVISSFFAGIAGALFAHFVPIINP 228

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F F +++ ++ +V+LGG+ S +    A   L  + E    + F    +        + 
Sbjct: 229 GSFTFVKSMEIVVMVVLGGLGSTTGAIVAATFLTLLPEGMRSL-FTLLGAEGSLAQKVDQ 287

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               +  + L  ++L R   L   +   + L R
Sbjct: 288 IRMPVYGLLLVALMLARPQGLFGTKEIWDVLPR 320


>gi|24380045|ref|NP_722000.1| putative branched chain amino acid ABC transporter, permease
           protein [Streptococcus mutans UA159]
 gi|290579976|ref|YP_003484368.1| putative branched chain amino acid ABC transporter permease
           [Streptococcus mutans NN2025]
 gi|24378036|gb|AAN59306.1|AE014996_9 putative branched chain amino acid ABC transporter, permease
           protein [Streptococcus mutans UA159]
 gi|254996875|dbj|BAH87476.1| putative branched chain amino acid ABC transporter permease protein
           [Streptococcus mutans NN2025]
          Length = 318

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 73/339 (21%), Positives = 141/339 (41%), Gaps = 42/339 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     L ++   LLF  + A     Y   + + I I ++ A G ++V+G  G LSL 
Sbjct: 6   KANITWLALVLIIFFLLFGLISAGIIDIYYTQILMGIGISIIMALGTNLVLGFSGQLSLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  IL ++       +L I V  +++    +++G+P+L+ +GDYLAIATL
Sbjct: 66  QAGFMAIGAYATAILTTQNPTYAGFYLSIIVGMIVTATVALVVGIPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++EI + ++     +TNG  GI                             +   + V+
Sbjct: 126 GVAEIIRKLIENGGDLTNGSRGIMGI-------------------------LKYTTWPVV 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                L    +L   R+ +      +R+++ A  ++       K+  F +++    +AG+
Sbjct: 161 FVFVVLITIFVLNYLRSPMGREVLAVREDEIAAEAMGVNTTKIKVLTFMIAAVISSIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +      ++P  F   ++I  + + +LGG+ S++    A  +L  +      +      
Sbjct: 221 LYVGYIGTVAPKDFTIMKSIDFLIVAVLGGLGSVTGTIVAAVVLGILNMFLQNV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                    +     +  +AL LV++ R   LL     S
Sbjct: 275 ---------SDIRMIIYSLALILVMVFRPGGLLGTWEFS 304


>gi|311104703|ref|YP_003977556.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310759392|gb|ADP14841.1| inner-membrane translocator 21 [Achromobacter xylosoxidans A8]
          Length = 611

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 99/275 (36%), Gaps = 22/275 (8%)

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S        +GAY+   L ++Y +S WL +P   +++     ++G  +L+  G YL + T
Sbjct: 54  SFGQAAFVGLGAYTTAFLTTQYDVSPWLALPAGLVLTAVVAYLLGAITLRLSGHYLPLGT 113

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           +        +      +     GI   + +   G ++ S                 +YY+
Sbjct: 114 IAWGLSLYFLFGNIDWL-GKHDGIAGIEPISIFGMSLASGRH--------------IYYL 158

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +     L+      L  +    A R ++       S+       K+  F  ++    ++G
Sbjct: 159 IWVFVLLALWATRNLLNSRPGRAIRALKSGAGMAESMGVNTAAYKVVIFVWAALLACVSG 218

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             +A  +  +SP  F  +  I  + + ++GG   +      +++++ + +    +     
Sbjct: 219 WLYAHMQRAVSPSPFGINYGIEYLFMAVVGGAGYVWGALLGSSVILVLKDQLQNLLPKLL 278

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           ++   F          +  + L L++    + L  
Sbjct: 279 DTNANF-------EMIVFGVLLILMLQYARNGLWP 306


>gi|317405120|gb|EFV85465.1| ABC branched chain amino acid family transporter [Achromobacter
           xylosoxidans C54]
          Length = 643

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 99/302 (32%), Gaps = 15/302 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           LL +    L     G      Y+ ++ I+ L + + A  + I+ G  G L+      + +
Sbjct: 26  LLWLAIACLALTVAGPWLFDTYLLNVLIKALFFAVAAVTVDILWGYTGYLTFGQSAFFGV 85

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +  + YG S  + +  + +  GA  ++             +     +  +   I
Sbjct: 86  GAYAAGLAFTHYGFSPGIALAAALVAVGAAALLALATGWLSFYRGASPFFATVISLVLPI 145

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           ++    ++ G                            +F +     Y +  G   + A 
Sbjct: 146 VLTQVALSGGT---------------YTGSSSGLTGYDTFDLSLEAWYVIAAGGLSIVAL 190

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +     R+        +RDN+     L       +++   V  A   +AG  + A    +
Sbjct: 191 LAWVAVRSDGGRILAALRDNEGRCSYLGLNTAHWRIALLVVCGAVASLAGFGYGAFSGVV 250

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +P++  F     +I  V LGG  ++        ++        G   + +  +L      
Sbjct: 251 APELTGFVFGTELIIWVALGGRGTVWGPVLGAVLINVAGSYLSGNMPFLYQLVLGVTFML 310

Query: 317 NM 318
            +
Sbjct: 311 VI 312


>gi|256828425|ref|YP_003157153.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
 gi|256577601|gb|ACU88737.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
          Length = 345

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 80/358 (22%), Positives = 135/358 (37%), Gaps = 45/358 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +N+   IL    +V  L LFL+        Y   +   I + ++ A  L+++ G  G+ S
Sbjct: 1   MNRNTTILLNFVLVGCLGLFLWWAEGNLDGYKIQILNLIAVNIILALSLNLIYGFTGMFS 60

Query: 68  LNCVIAYAIGAYSYVILGSRY-------------------GLSIWLLIPVSAMISGACGM 108
           L      AIGAY   IL                            + +    +++   G+
Sbjct: 61  LGHAGFMAIGAYVCSILIMTPDQKATLFILQEAFPLVQNSHAPFLVAVIAGGLVAALFGI 120

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
           ++G P L+   DYL IATL  +EI + I      +TNG  G         L         
Sbjct: 121 VIGAPLLRLGDDYLGIATLGFAEIVRVIGNNIPRVTNGALGFKGIPDHANLWWNF----- 175

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                               G C L+   ++ +  +   N ++ IRD++ A  ++   + 
Sbjct: 176 --------------------GWCLLTLYFVIRIVNSNTGNVFKAIRDDETAAKAMGINVF 215

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
             KL +F   + F G+ GA  A+    I P MF F+    V+ IV+ GG+ S++    A 
Sbjct: 216 KIKLLSFTFGAFFAGVGGALLASLLTTIDPKMFLFTLTFSVLMIVVTGGLGSITGSILAG 275

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
             +  V+E    +           D         +  + L LVIL R   ++ +R  +
Sbjct: 276 TGITVVLEWLRIVENPITIGDWSMD-GIPGMRMVVFSLVLILVILFRREGIMGMREIT 332


>gi|192289834|ref|YP_001990439.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|192283583|gb|ACE99963.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 381

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 76/291 (26%), Positives = 131/291 (45%), Gaps = 17/291 (5%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
               + Y  S  + +LIY +    ++++ G  G +S+      AIGAYS  +   +YGL 
Sbjct: 36  PYVLESYYLSQLVFVLIYAIVGIAMNVLSGQAGQVSIGHAAFMAIGAYSAAV-AEKYGLP 94

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + + + ++   +G  G ++GLP+L+  G YLAIATL  + I + I+ +W+ +TNG  G+ 
Sbjct: 95  LPVYLVLAGGFTGLIGYLVGLPALRLHGIYLAIATLAFAFIVEEIVTRWESVTNGNEGLM 154

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           +                         +     YY+ LG+  +     + + R+    A+ 
Sbjct: 155 LGAPS----------------LFGLKLGAQGFYYLCLGVTVVVILAAINILRSPTGRAFL 198

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            IRD++ A  S+       K  AFA+S+AF G+AG  +A     ISP+MF  S +I  + 
Sbjct: 199 AIRDSETAARSMGIDTARYKTRAFAISAAFTGLAGVLYAHKLSFISPEMFSLSMSIEFVM 258

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           I+I+GG+ SL         +I V  +   +        L       +    
Sbjct: 259 IIIIGGVLSLRGAVFGAIFMIMVDPILIVVKDKVPQLTLAAMQGIGLSDQL 309


>gi|148254436|ref|YP_001239021.1| branched chain amino acid ABC transporter ATP-binding protein
           [Bradyrhizobium sp. BTAi1]
 gi|146406609|gb|ABQ35115.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
           / amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Bradyrhizobium sp. BTAi1]
          Length = 583

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 47/328 (14%), Positives = 98/328 (29%), Gaps = 29/328 (8%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++    +V      + +       Y+ ++ ++     + A  + I+ G  G L+      
Sbjct: 1   MIVPAVLVAIAAGVIIIAPLLLDTYLVNILVRACFVAIAAITVDIMWGYCGTLTFGQSAF 60

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           + IGAY+  I+ + YG   W +    A        +                   +  + 
Sbjct: 61  FGIGAYALAIMFTEYGFGPWQICAAIAAAVAVAAAVAAFTGWLSFYPGSTPLYASVISLV 120

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             I++     + G                            SF +       +       
Sbjct: 121 VPIVLVQILYSGGT---------------FTGSSSGLVGFESFDLEIETWLRLAGLGLLA 165

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +A + L L R+        +RDN      L       ++    +S+    +AG F+A   
Sbjct: 166 TAVLALGLMRSDTGRLLSALRDNDARCSYLGIDTSRLRIIVLVLSAIVSALAGFFYAGFG 225

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
              +P+   F+    ++ +V LGG  ++         +            Y +       
Sbjct: 226 AVAAPENASFTFGTNLVIMVALGGRGTVIGPVIGALCIEVASAYLANSLPYVWE------ 279

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    ++ +AL +VIL     LL 
Sbjct: 280 --------LIVGLALIIVILAFPDGLLG 299


>gi|325522953|gb|EGD01393.1| ABC transporter related protein [Burkholderia sp. TJI49]
          Length = 611

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 55/333 (16%), Positives = 108/333 (32%), Gaps = 34/333 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             V  L L +   A  +         QI IY ++  G++++V   GL+     + +    
Sbjct: 11  VAVLTLSLIVVSLALTATGTPLERATQIAIYTLYGMGVNLLVAYTGLVPFGASVFFGTAT 70

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y   +   R   +  L +  S +++     ++G   L+ RG Y ++ TL  S+I   I  
Sbjct: 71  YLVAVSLLRVLGNEVLALAASVIVTTVLAALIGAIVLRRRGLYFSLLTLACSQIAFEIAF 130

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           KW  +T G+ G+    R  F                   +     +          A ++
Sbjct: 131 KWTDVTGGENGLQNVPRPTF-------------------VTAAAFHVFACVTVIAVAWLL 171

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +       A + +RDN++   SL       KL AF +S+A IG AG            
Sbjct: 172 WRIVHAPFGRALQALRDNEQRAASLGYDTYRLKLRAFVISAAVIGYAGGLLCLMLQGAYA 231

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           +   +      + + +LGG+             I + +    +  +++            
Sbjct: 232 NNLSWEHAGDSLLMTVLGGVHQFLGPLWGAIAFILLEDKLSSLTEHWW------------ 279

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               +    +          +  +        R
Sbjct: 280 ---LIFAPIVIAFAFFSPEGIHGIVQRVLRRSR 309


>gi|239624979|ref|ZP_04668010.1| ABC transporter [Clostridiales bacterium 1_7_47_FAA]
 gi|239521365|gb|EEQ61231.1| ABC transporter [Clostridiales bacterium 1_7_47FAA]
          Length = 322

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 63/312 (20%), Positives = 133/312 (42%), Gaps = 29/312 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +  Y  ++ IQ+LI ++   GL+ + G  G ++L     +++GAY+  +L ++ GL
Sbjct: 22  PMFITNNYHLNLMIQVLINIIIVVGLNFITGLTGQMNLGTAGIFSMGAYTSSLLATKLGL 81

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           + W+ +  +  +    GM +G PSL+  G YLA+ T+  SEI + ++     +T G  G+
Sbjct: 82  NPWICLVAAVGMGCLIGMGLGYPSLRVSGVYLALTTIGFSEIVRILMTNLTGLTGGALGV 141

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                    G   +S                 +YY+ L +  L       +  +    ++
Sbjct: 142 TGIPTFSIFGFKFQSNKE--------------IYYLYLVIAVLLIFNAYRIVNSKWGRSF 187

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             ++DN  A  +    I   K+ AF +++ +  +AG+ ++     I+P  +    +I  +
Sbjct: 188 LAVKDNPDAVEAGGVNIANIKIMAFTLAAIYATIAGSLYSHYVGFINPSAYNLEFSINYV 247

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            ++++GG+ S+        ++  V E    M  YY+                +  I   L
Sbjct: 248 VMLVIGGIGSVPGNVLGAILVTLVPEFLRFMENYYW---------------LVFSIITLL 292

Query: 331 VILMRSHSLLRL 342
            ++   + ++ L
Sbjct: 293 FVIFLPNGIVSL 304


>gi|289432738|ref|YP_003462611.1| inner-membrane translocator [Dehalococcoides sp. GT]
 gi|288946458|gb|ADC74155.1| inner-membrane translocator [Dehalococcoides sp. GT]
          Length = 350

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 73/323 (22%), Positives = 143/323 (44%), Gaps = 16/323 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A++   L+ LF        Y   +   + I V+ A GL+I++G  G LS+      A+GA
Sbjct: 26  AMLIGFLILLFSLPFNINSYWLGILNLVGITVIAAAGLNILMGYCGQLSVGHAGFIAVGA 85

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL ++ G+     +  S +++G  G++ GLPSL+ +G YLAI+T+    I   ++ 
Sbjct: 86  YTTAILANKLGVPFPFDMIASGIMAGLVGVLFGLPSLRVKGFYLAISTIAAQFIIIWVIN 145

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  +T G  GI +                     +     +   +++++ +  L+   +
Sbjct: 146 HWSGLTGGFNGIVIPP---------------INLFNFDFTTQGSQFFIIMLVAVLAIFFM 190

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + RT I  A+  IRDN  A   +   +   KL AF +     G+AG+  A     ++ 
Sbjct: 191 KNIARTRIGRAFVAIRDNDLAAEVMGINVFRYKLLAFFIGCFLAGVAGSLMAHWIGYLTA 250

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F  S++I+ + IVI+GG+ +       T  +  + +    ++    ++  +    F  
Sbjct: 251 ENFTLSDSILYVGIVIIGGLGTGVGPILGTLFIRLLQQGVQYVSPLMGSAFPQLPSGFAA 310

Query: 319 -RHTTLMVIALFLVILMRSHSLL 340
                +  +A+ L +++    L 
Sbjct: 311 GLGPMVFGLAIVLFLVLEPRGLA 333


>gi|226307971|ref|YP_002767931.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226187088|dbj|BAH35192.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 362

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 69/327 (21%), Positives = 137/327 (41%), Gaps = 22/327 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  V+    +   L A++S  +       + I  +   GL+IV G  GLLS+     + 
Sbjct: 32  ILQLVLLVAAVCALLLASQSAPFRVGQFTSVFIIAIAIAGLNIVSGYTGLLSIGHSAFFG 91

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY+  +L    G S    IP++ ++    G+++GLPSL+ +G YLA+ TL ++  F  
Sbjct: 92  LGAYTTGVLIVDRGYSPLTTIPMAVVLCFVLGLLVGLPSLRIKGLYLALVTLAVAVAFPE 151

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           ++ K   +T G AG+ V   L                  +     +++++V +    +  
Sbjct: 152 VIRKTGDLTGGAAGMVVRANLLVPPKWTG---------LTRADTYLWIFWVSVVTLAIVM 202

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +I  L ++    A   +RDN+ A  +    +   K+ AF +S A  G+AG+ F      
Sbjct: 203 LLIRNLVKSRFGLAMVAVRDNEIAASANGINVARVKILAFGLSGAITGLAGSLFTMYIGA 262

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +SP+ F   ++I  I+ ++LGG+ +          ++ +      +     +        
Sbjct: 263 LSPESFSLMKSIEFITGLVLGGIATQFGPIVGATAVVFLPYYTGSVTDGPVSG------- 315

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                  +    L  ++ +    ++  
Sbjct: 316 ------VVFGAVLIAIVFLMPDGIVGR 336


>gi|291534912|emb|CBL08024.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           (TC 3.A.1.4.-) [Roseburia intestinalis M50/1]
 gi|291539476|emb|CBL12587.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           (TC 3.A.1.4.-) [Roseburia intestinalis XB6B4]
          Length = 358

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 71/330 (21%), Positives = 130/330 (39%), Gaps = 24/330 (7%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + +V  L++ + + A      +  + + +  Y + A GL++ VG LG LS+     
Sbjct: 18  ITFAMVIVAYLIVQILIAAGVLSSLMQGLLVPMCTYSIVAIGLNLCVGYLGELSIGHAGF 77

Query: 74  YAIGAYSYVILGSRYGLS-------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
             +GA+S                     ++ +    +   G ++G+P L+ RGDYLAI T
Sbjct: 78  MCVGAFSSAFATKLLQNVIPNQIILFITVLIIGTAAAAFFGFLIGIPVLRLRGDYLAIVT 137

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI +N++       +     +       +  +               I  +  +  
Sbjct: 138 LAFGEIIKNVINVLYIAKDTDGFHFAISNGNAIKLSDEGEWLINGAKGIAKIPHLSSFTA 197

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            + M  +   I+  L  +    A   IRDN+ A  S+   I   KL AF +S+A  G  G
Sbjct: 198 GVIMILICLFIVYHLVNSRSGRAIMAIRDNRIAAESVGINITKFKLMAFTISAAIAGAGG 257

Query: 247 AFFAASRDRISPD--MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
             +A +   ++     F ++ +I+++  V+LGGM S      A  IL  + E+  G++ Y
Sbjct: 258 VLYAHNLSTVTATPANFGYNMSIMILVFVVLGGMGSFRGSIIAAVILTLLPEVLRGLSDY 317

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
                             +  I L  ++L 
Sbjct: 318 ---------------RMLIYSIVLIAMMLF 332


>gi|116253481|ref|YP_769319.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115258129|emb|CAK09230.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 550

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 94/297 (31%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       IGAY+  ++      +   L   S   +     +  
Sbjct: 271 AAIGLAITFGVMGVINMAHGEMVMIGAYTTYVVQEYITSAFPELADYSLAFAVPAAFVFT 330

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       +   +     + +L  W      +  +              + +    
Sbjct: 331 GFVGLVIERA--VIRYLYGRPLETLLATWGVSLILQQAVRSIFGPTNREVRNPTWMSGV- 387

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++++    +  +++L L+R+A     R +  N++   S+     +  
Sbjct: 388 FDLGGLSITWNRLWIIVFSMVVFVALLLLLKRSAFGLQMRAVTQNRRMASSMGIRTGWVD 447

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              FA+ S   G+AG   A S+          S  I    +V+ GG+ +L         L
Sbjct: 448 AFTFALGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGALSL 505

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             V +                          L+++ + L I  R   L  L+  +  
Sbjct: 506 GVVNKFLEPFAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 549


>gi|268679118|ref|YP_003303549.1| inner-membrane translocator [Sulfurospirillum deleyianum DSM 6946]
 gi|268617149|gb|ACZ11514.1| inner-membrane translocator [Sulfurospirillum deleyianum DSM 6946]
          Length = 345

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 71/356 (19%), Positives = 134/356 (37%), Gaps = 45/356 (12%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I+   A+V   + F++       +Y   +   I I+V+ A   +++ G  G  SL     
Sbjct: 9   IVLKSAMVLGFVWFIWFANGHFDEYTIRILNNIAIFVILAVSYNLINGVTGQFSLEPNGF 68

Query: 74  YAIGAYSYVI-------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
            AIGAY   +                          +  + + +S + +    +++  P 
Sbjct: 69  VAIGAYVTALLLISPDNKSYQYAIEDPYPFIMTLESNFVVALLLSGLFAMLLALVLSFPV 128

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
            + RGDYLAI TL    I + + I    +TNG  G+                        
Sbjct: 129 FRVRGDYLAIVTLGFGFIIKILAINHPAVTNGSLGLNDIPEFSN---------------- 172

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                     Y   G+  +S  ++L +  +    A + +RD++ A  ++      AK  A
Sbjct: 173 ---------LYWTGGLAIVSVIVVLNIINSKFGRAMKAVRDDEDAAIAMGVNTFKAKTFA 223

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F  S+ F G+ G   AA    ISPD+F F     ++ I++LGG+ S +     T +++G 
Sbjct: 224 FCTSAFFEGIGGGLLAALLTSISPDLFDFFFTFQLLIIIVLGGLGSTTGAIIGTVLVMGG 283

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            E    ++    N       +       +  + L  ++L     ++  R  ++  +
Sbjct: 284 SEWMRFLDEP-MNLFGYETVAMPGMRMVVFSLILIFIMLFAREGIMGKRELTDLFK 338


>gi|187922086|ref|YP_001893728.1| ABC transporter [Burkholderia phytofirmans PsJN]
 gi|187713280|gb|ACD14504.1| ABC transporter related [Burkholderia phytofirmans PsJN]
          Length = 604

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 54/331 (16%), Positives = 105/331 (31%), Gaps = 29/331 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              +  +  +V    L +  G      Y  ++  + L+Y   A  + ++ G +G+L+   
Sbjct: 9   RRTLRPVAIIVLVGALLVGFGPVVLDSYSVNVLTRSLLYAAVALTVDLLWGYMGILTFGQ 68

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
              +AIGAY+  ++ +  G S WL +    +   A   +  L                + 
Sbjct: 69  SAFFAIGAYTSGLIFTHIGFSPWLALAALVLGVLAAMAVAALVGWLAFWHGATNLYASVI 128

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +   I+      + G                            SF +     +++  G 
Sbjct: 129 TLVLCIVCTQVIFSGG---------------NFTGSSSGLTGFDSFDLSMQAWFWIAGGF 173

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +  +    L  +        IR+N++    L       K +AF   SA   +AG  +A
Sbjct: 174 LIVVTAGAWLLVHSDAGRILIAIRENEQRCEYLGLNTALLKTTAFLGCSAVGAVAGYLYA 233

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                +SP++  F     ++    LGG  +L      T ++        G   Y +    
Sbjct: 234 NYSMLVSPELAGFVFGTELVIWTALGGRATLLGPIFGTMLVDYESAQLSGDFPYVWK--- 290

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                       L+     +VI+     LL 
Sbjct: 291 -----------LLIGSIFVIVIIAFPRGLLP 310


>gi|256544601|ref|ZP_05471973.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Anaerococcus vaginalis
           ATCC 51170]
 gi|256399490|gb|EEU13095.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Anaerococcus vaginalis
           ATCC 51170]
          Length = 326

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 70/336 (20%), Positives = 138/336 (41%), Gaps = 45/336 (13%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +L +V   ++ + + +     Y  S+   + I ++ +  L+I VG+LG ++L      +
Sbjct: 13  FVLVLVSFAIIQILILSGIIDSYWQSILFLLCINIILSISLNITVGNLGQITLGHAGFMS 72

Query: 76  IGAYSYVIL----GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           IGAYS  I             ++ + +  + +    + +G+P L+  GDYLAI TL   E
Sbjct: 73  IGAYSAGIFLKTGIIEGIPGFFIALLIGGLFAFLFSLAIGIPVLRLNGDYLAIVTLAFGE 132

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I + ++     IT G  G+                              +  + ++  + 
Sbjct: 133 IIRVVVENL-SITGGAQGMAGIP-------------------------TVDSFALVFFVT 166

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L    +  +  +    +   I+DN+ A  S       +K+ AF +S+ F G+AGA +A 
Sbjct: 167 VLCVVFMYSIMTSRFGRSVLAIKDNELAAESCGINTTKSKIFAFTLSALFAGVAGAIYAQ 226

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           +   I+ D+F ++++  ++ +V+LGGM S +    +T  L  V E+      Y       
Sbjct: 227 TTGVIAADVFNYNKSFDILVMVVLGGMGSFTGSVISTITLTIVPEILRAFAEY------- 279

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                      +  + L +V++ R   L+     S 
Sbjct: 280 --------RMIIYSVILVIVMIFRPQGLMGREEFSI 307


>gi|126726246|ref|ZP_01742088.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2150]
 gi|126705450|gb|EBA04541.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2150]
          Length = 633

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 95/312 (30%), Gaps = 26/312 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---RYGLSIWLL 95
                    I+ + A GL+I  G +G++++       +GAY+  ++      Y LSI + 
Sbjct: 343 FLDGLSLASIFFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQQIIDNYTLSILIA 402

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           IP +  ++ A G+ M          +  + TL+ +      L +      G     +   
Sbjct: 403 IPAAFAVTFAAGVAMERLV-VRHLYHRPLETLLATFGVSIALQQIAKNVFGTQARPLTSP 461

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                      +      +  +        + +        +   L +T      R +  
Sbjct: 462 ---------DWLGGAWMINDVISISWIRVAIFVLSILFFVMLWFTLNKTRFGMETRAVTQ 512

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N +   S+        +  F + S   G+AG          S     +         V++
Sbjct: 513 NPRMAASMGINPDKINMLTFGLGSGIAGIAGVAIGLFAKVTSELGSDYIVQS--FMTVVV 570

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++       A++  + +     N     +   F   F +                R
Sbjct: 571 GGVGNIWGTLAGAAMIGFLQKGIEWFNPSNTLAAQTFMIVFIIIFIQF-----------R 619

Query: 336 SHSLLRLRTPSN 347
              ++ LR  + 
Sbjct: 620 PRGIIALRGRAA 631


>gi|73748712|ref|YP_307951.1| branched-chain amino acid ABC transporter,permease protein
           [Dehalococcoides sp. CBDB1]
 gi|147669471|ref|YP_001214289.1| inner-membrane translocator [Dehalococcoides sp. BAV1]
 gi|73660428|emb|CAI83035.1| branched-chain amino acid ABC transporter,permease protein
           [Dehalococcoides sp. CBDB1]
 gi|146270419|gb|ABQ17411.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Dehalococcoides sp. BAV1]
          Length = 350

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 74/323 (22%), Positives = 143/323 (44%), Gaps = 16/323 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A++   L+ LF        Y   +   I I V+ A GL+I++G  G LS+      A+GA
Sbjct: 26  AMLIGFLILLFSLPFNINSYWLGILNLIGITVIAAAGLNILMGYCGQLSVGHAGFIAVGA 85

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL ++ G+     +  S +++G  G++ GLPSL+ +G YLAI+T+    I   ++ 
Sbjct: 86  YTTAILANKLGVPFPFDMIASGIMAGLVGVLFGLPSLRVKGFYLAISTIAAQFIIIWVIN 145

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  +T G  GI +                     +     +   +++++ +  L+   +
Sbjct: 146 HWSGLTGGFNGIVIPP---------------INLFNFDFTTQGSQFFIIMLVAVLAIFFM 190

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + RT I  A+  IRDN  A   +   +   KL AF +     G+AG+  A     ++ 
Sbjct: 191 KNIARTRIGRAFVAIRDNDLAAEVMGINVFRYKLLAFFIGCFLAGVAGSLMAHWIGYLTA 250

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F  S++I+ + IVI+GG+ +       T  +  + +    ++    ++  +    F  
Sbjct: 251 ENFTLSDSILYVGIVIIGGLGTGVGPILGTLFIRLLQQGVQYVSPLMGSAFPQLPSGFAA 310

Query: 319 -RHTTLMVIALFLVILMRSHSLL 340
                +  +A+ L +++    L 
Sbjct: 311 GLGPMVFGLAIVLFLVLEPRGLA 333


>gi|56695920|ref|YP_166271.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56677657|gb|AAV94323.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 400

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 64/369 (17%), Positives = 129/369 (34%), Gaps = 36/369 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKS-------QKYIDSMGIQILIYVMFAWGLSIVV 60
           L+K D  L ++  +  LL    L    +             +  + +I+ +FA G +I+ 
Sbjct: 4   LDKKDTSLLIIVAILTLLAPFILNPFPTGSAMAQFNAGYPDLMQRFVIFGIFAIGFNILF 63

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G LS        +G+YS V +      ++   I +S +++    +++G  SL+  G 
Sbjct: 64  GLTGYLSFGHAAFLGVGSYSAVWMFKLLSYNVIPAIALSVVVAALFALLIGYVSLRRSGI 123

Query: 121 YLAIATLIMSEIFQNILIKW-----KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
           Y +I TL  +++   +           +TNG+ G+ V      +            F  S
Sbjct: 124 YFSILTLAFAQMSFALAYSVLSNPKFNLTNGETGLQVYADDPQIFHRDGLPDMPHLFGLS 183

Query: 176 -----------FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
                      +       YY+   +  +   + + + R+      R ++ NQ+      
Sbjct: 184 MRSTYKLDLGAWSFDFNAGYYLCAVIMMVMFYLAIRIFRSPFGMMLRAVKSNQQRMNYTG 243

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                  L+AF +S  + G+AG   AA       +  +++ +  V+ + ILGG  +L   
Sbjct: 244 LNPRPYTLAAFVISGMYAGLAGGLMAAMDPLAGAERMQWTASGEVVLMTILGGAGTLIGP 303

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM-------------VIALFLV 331
                 +     +   +N    +    F           +              I   LV
Sbjct: 304 VLGAGFIKYFENIFSKINDTILHQWFSFLPDGIEDFMVFIVHPFIGKGWHLTLGILFMLV 363

Query: 332 ILMRSHSLL 340
           ++     L+
Sbjct: 364 VIFLPGGLV 372


>gi|311741931|ref|ZP_07715742.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Aeromicrobium marinum DSM
           15272]
 gi|311314937|gb|EFQ84843.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Aeromicrobium marinum DSM
           15272]
          Length = 364

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 71/327 (21%), Positives = 128/327 (39%), Gaps = 23/327 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            LLAV     L + L  +    +      ++ I+ +   GL++  G +GLLS+     + 
Sbjct: 34  ILLAVGAVAALLVILWGSGLGAFNQGQLTRVAIFAIAIAGLNVATGYIGLLSVGHSAFFG 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY+  +L   YG      IPV+ ++    G+ +GLP+L+ RG YLA+ TL     F  
Sbjct: 94  LGAYTTGVLVVSYGWDPLTTIPVALVLCFIVGLFVGLPALRIRGLYLAMVTLAFGVAFPE 153

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I+  +  +T G  G+               L        +      ++Y++ + +  +  
Sbjct: 154 IIAHFDDLTGGAEGMI---------IRRTDLRPPEWSGFTLGERTQWLYWLCVVVLLIVM 204

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +I  L R+    A   IR+N+ A  +    I   K +AF VS A  G+ G+ FA     
Sbjct: 205 LLIHNLVRSRYGMAMIAIRENEVAASASGIDIAVMKTTAFGVSGAITGVGGSLFAMYLGS 264

Query: 256 ISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           +  +  F     I ++  +++GG  + S        ++ V      +             
Sbjct: 265 LFAEGSFTLLAGITLLIGLVIGGEATRSGPLLGALAVVYVPYYTSDIGQ----------- 313

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   L  + L  VI +    +  
Sbjct: 314 --GQSAAVLFAVVLIFVIFVAPSGIAG 338


>gi|300311879|ref|YP_003775971.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300074664|gb|ADJ64063.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 358

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 73/345 (21%), Positives = 145/345 (42%), Gaps = 23/345 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +R ++      ++  ++ +  F+ +    S+ +  ++ +  L++ + A GL+++ G
Sbjct: 18  QIFPIRQDR------IIFTLFMVFAFVGVPLLGSEYWFSAILVPFLVFALAALGLNVLTG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGD 120
             G LSL      A+GAY+      R      +  + +S   +   G++ GLPSL+ +G 
Sbjct: 72  YAGQLSLGSAAFMAVGAYAAYNFQLRVDGIPIVATLLLSGGCAALVGVLFGLPSLRIKGF 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL         L K+   +N  +   ++                       +   
Sbjct: 132 YLAVATLAAQFFVVWALTKFPWFSNNSSSGVISTPKIDFF-------------GIAIDTP 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y  +L +  + A +   L R++   AW  +RD   A   +   ++  KL+AFAVSS 
Sbjct: 179 VRKYLFVLAVVSVLALVAKNLVRSSTGRAWMAVRDMDVAAEVIGIPLMRTKLTAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           + G+AGA +A      + PD F    +  ++ ++I+GG+ S+      +A ++ +     
Sbjct: 239 YCGVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGSFLGSAFILLLPIFLD 298

Query: 300 GMNFYYFNSLLKFDCSFNMRH--TTLMVIALFLVILMRSHSLLRL 342
                    L     +  + H    +    +   ++   H L RL
Sbjct: 299 NALPPLAALLHLPFTNATVSHIQMMVFGALIIFFLIAEPHGLARL 343


>gi|158423510|ref|YP_001524802.1| putative branched-chain amino acid transport system protein 1
           [Azorhizobium caulinodans ORS 571]
 gi|158330399|dbj|BAF87884.1| putative branched-chain amino acid transport system protein 1
           [Azorhizobium caulinodans ORS 571]
          Length = 591

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 118/326 (36%), Gaps = 23/326 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
              +  LL         S ++  S+   I +Y + A GL ++ G  G  S        I 
Sbjct: 4   FLPILTLLAAALALQALSGEHAVSVLNYIGLYALVALGLVVLTGITGQTSFGQAAFAGIA 63

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  ++ +++GL   + +P + + +     ++   +L+  G YL ++T+        + 
Sbjct: 64  AYATAVIATQFGLGPLVTLPAALLTTAVAAFLIAAITLRLSGHYLPLSTIAWGISLFYLF 123

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
              + +  G  GI     L   G  +                      ++ G+  L+   
Sbjct: 124 GNIEML-GGHTGIDHIPPLSLFGHELTGGRELG--------------VIIWGLVALAVWA 168

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  +A   A R ++D      +     +  K  AF +++   G++G  +A     ++
Sbjct: 169 VSNLLDSAQGRALRAVKDAPLMAETFGVDTVKEKRIAFVLAALLAGLSGWLYAYLLRFVN 228

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F  S  I  + +V++GG   +       A++    E           +   F+    
Sbjct: 229 PSPFSLSIGIEYLFMVVVGGAGYVWGAIIGAALITLAREWLQDFLPVLLGTSGNFET--- 285

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLR 343
                ++   L + +L R+   +  R
Sbjct: 286 -----VVFGGLIIFLLHRAEGGVAER 306


>gi|254564216|ref|YP_003071311.1| ABC transporter ATP-binding protein [Methylobacterium extorquens
           DM4]
 gi|254271494|emb|CAX27509.1| putative ABC transporter, putative membrane protein precursor with
           two ATP-binding domains [Methylobacterium extorquens
           DM4]
          Length = 823

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 72/330 (21%), Positives = 136/330 (41%), Gaps = 31/330 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
                +   +  L L        +  Y   +   + + V+   GL++++G  GL+SL   
Sbjct: 6   RAPAAMPLAILALTLAGLGLVAATSGYSHFVIALVALTVVAGTGLNVLLGLAGLISLGHA 65

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             YA+GAY+  IL  +     WL +P +A +S   G  + +P+++ RG YLA+ T+    
Sbjct: 66  GFYALGAYASAILTLKGVS-FWLALPAAAALSALVGAALAVPAMRVRGPYLAMVTIAFGF 124

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           + ++ LI+   +T G+ G+ VA      G  +                   + ++ +   
Sbjct: 125 LVEHALIEGGELTGGQNGLVVATGPSLFGLPLGERD---------------LAWLAVISA 169

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            LS      LR   +  A R +RD   A  SL    +  K +AFA+S+A  G+AGA    
Sbjct: 170 GLSLYGFHRLRHARLGQALRAVRDADVAAASLGFDPVRVKTAAFAISAALTGLAGAVLPP 229

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               I+P  F F+++I+ +  V++GG  ++        + + + E   G+  Y       
Sbjct: 230 LMLFIAPSSFPFTQSILFVLAVVVGGAGTVLGPLFGALVTVLLPEALAGLAEY------- 282

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                         +   +V+ +    ++ 
Sbjct: 283 --------RLLFFGLTTLVVLWLVPAGIVG 304


>gi|28572362|ref|NP_789142.1| ABC transporter branched chain amino acid transport permease
           [Tropheryma whipplei TW08/27]
 gi|28410493|emb|CAD66879.1| putative ABC transporter branched chain amino acid transport
           permease [Tropheryma whipplei TW08/27]
          Length = 364

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 74/342 (21%), Positives = 136/342 (39%), Gaps = 29/342 (8%)

Query: 7   RLNKYDKILCLLAVVYPL-LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           R  ++  +L  + +VY L ++   +  T+           + IY + A GL++VVG  GL
Sbjct: 17  RPQQWFFLLPFVVLVYLLPIINPPVITTEPGNNFPISLFTMAIYALAAVGLNVVVGYAGL 76

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSI----WLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           L L  +  +A+GAY   +  S     +       IPV+   +   G  +G+P+L+ RGDY
Sbjct: 77  LDLGYIAFFAVGAYVSAVFTSPDSPYVKIPYLWTIPVAIFTAMVFGAALGVPTLRLRGDY 136

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LAI TL   EI + +      +            L F              P       +
Sbjct: 137 LAIVTLGFGEIVRIMATVIPALRG---------NLGFSNVGHPPGDYPSGQPIFTPDNGV 187

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             Y+V + +      I+  L R+ +   W  I  ++ A   +       K+ AFA+ +A 
Sbjct: 188 AWYWVAITVVIFVLVIVGNLERSIVGRNWFAICQDEDAAEVMGVNTFSFKVWAFAIGAAI 247

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G++G+  AA    ++   F  + +++ +  V+LGG  +    A   A++  +      +
Sbjct: 248 GGLSGSLQAAQTGFVNNQRFDVATSVLFLVAVVLGGSGNKFGAAIGGALVAYIPLRFTEI 307

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
             Y                  +  + L L++L R   L  ++
Sbjct: 308 AQY---------------KYLIFGVCLILLMLFRHEGLFPMK 334


>gi|302556054|ref|ZP_07308396.1| urea ABC transporter, permease UrtC [Streptomyces viridochromogenes
           DSM 40736]
 gi|302473672|gb|EFL36765.1| urea ABC transporter, permease UrtC [Streptomyces viridochromogenes
           DSM 40736]
          Length = 367

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 69/311 (22%), Positives = 134/311 (43%), Gaps = 28/311 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 +       +L+Y +   GL+++VG  G +SL     +A GAY+  ++  RY  +
Sbjct: 33  PFYFAPFQVFQLTMVLLYAVALAGLNLLVGFGGQISLGHGAFFAAGAYTAAVMLDRYDSA 92

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
               +PV+A      G+  G+P+L+ RG YLA+ TL  +     +L + +P+T G  G  
Sbjct: 93  HLATLPVAAAGCFLLGLGFGVPALRLRGLYLALVTLSFAVFLPPLLKRLEPVTGGSMG-- 150

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                        ++ +      S +  + +MY V+L +  ++  +   L R+ +  A  
Sbjct: 151 ------------LTVDKLQPPAWSGLAEDQWMYLVVLAVTAVALLLARNLLRSRVGRALL 198

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +RD++ A   +   +   K  AFA S+ F G+AG  +      +SPD F F  +I +++
Sbjct: 199 ALRDDESAAEVMGVRLSLHKTLAFAWSAMFAGVAGCLYTWVIGFVSPDSFSFVLSITLLA 258

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
            +++GG+ SL       A ++ V  +   ++                    +  + +  V
Sbjct: 259 GLVVGGLASLYGPLLGAAFVMYVPSVAQDVSDAAPG--------------VVFGLLIIAV 304

Query: 332 ILMRSHSLLRL 342
           + +    L  L
Sbjct: 305 MFVAPTGLAGL 315


>gi|146339550|ref|YP_001204598.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146192356|emb|CAL76361.1| putative ABC transporter permiase component [Bradyrhizobium sp.
           ORS278]
          Length = 334

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 65/314 (20%), Positives = 125/314 (39%), Gaps = 24/314 (7%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +       Y+ ++ +  L+Y   +   +I+ G  G +SL   + + +GAY+  IL +++G
Sbjct: 26  VPFFVKDVYVQNIMVLTLMYAALSQSWNILSGYCGQISLGHALYFGLGAYTTAILFTKFG 85

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +  W  +    +IS    M +G P  +  G Y  IAT++++EI   +   W         
Sbjct: 86  VLPWFGMLAGGLISAVIAMALGYPCFRLGGHYFVIATIVIAEITLLLFQNWDFAGAALGI 145

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                R  +L                    ++  +Y  L +  ++  +  WL  +     
Sbjct: 146 DIPVRRDSWLTFQFTR-------------SKLPYFYFALVLACVAWFVTWWLEDSKWGYW 192

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENII 268
           WR ++DN  A  SL   +  +K+ A AVS+  + + G+F+A     I P+    F  +++
Sbjct: 193 WRAVKDNPLAAESLGVDVFNSKMGAAAVSAFLVAIGGSFYAQFVSYIDPESVMGFQFSLL 252

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           +    +LGG+ +L        ILI + EL           +             +    +
Sbjct: 253 MALPAVLGGIGTLWGPMLGAVILIPLTELTRSYIGGSGRGV----------DLIVYGGLI 302

Query: 329 FLVILMRSHSLLRL 342
             + L R   L+ L
Sbjct: 303 IAISLARPQGLVSL 316


>gi|54023841|ref|YP_118083.1| putative branched-chain amino acid transporter component [Nocardia
           farcinica IFM 10152]
 gi|54015349|dbj|BAD56719.1| putative branched-chain amino acid transporter component [Nocardia
           farcinica IFM 10152]
          Length = 466

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 73/318 (22%), Positives = 135/318 (42%), Gaps = 22/318 (6%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  ++   +  +  +  L LF              +  +  ++ + A GL++VVG  GLL
Sbjct: 25  RPAQWAVGVPAIIALALLPLFPPPVLDTPAYNFGLVMAEFAMFALIAIGLNVVVGQAGLL 84

Query: 67  SLNCVIAYAIGAYSYVILGSR-------------YGLSIWLLIPVSAMISGACGMIMGLP 113
            L  V  YAIGAY+  +L S                 +    +P++  ++   G+I+G P
Sbjct: 85  DLGYVGFYAIGAYTVGLLTSPNSPWNQTDGGWLDPQWAWLACLPIAVAVTALSGLILGSP 144

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
           +L+ RGDYLAI TL   EI + +      +TNG  G+      +   +  +    F    
Sbjct: 145 TLRLRGDYLAIVTLGFGEIVRLLADNLHELTNGSLGLSEVAYPHVGESESKPNGVFSAGN 204

Query: 174 SSF---------VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           +             Y  + Y++ L +  +   I+  L R+ +  AW  IR+++ A   + 
Sbjct: 205 TGDPASANLLDRASYGTYWYWLGLALVIVVLLIVGNLERSRVGRAWVAIREDEDAAEIMG 264

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                 KL AF + +A  G++GA +A     I+P  F    +++ +  V++GG  +   +
Sbjct: 265 VPTFKFKLWAFLIGAAVGGLSGAMYAGQVQFINPTGFNIINSMLFLCAVVIGGQGNKLGV 324

Query: 285 AKATAILIGVVELCCGMN 302
                I+  + +    +N
Sbjct: 325 IFGAFIIAYLPKRLTSVN 342


>gi|222824112|ref|YP_002575686.1| branched-chain amino-acid ABC transporter permease [Campylobacter
           lari RM2100]
 gi|222539334|gb|ACM64435.1| branched-chain amino-acid ABC transporter, permease protein
           [Campylobacter lari RM2100]
          Length = 343

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 72/352 (20%), Positives = 130/352 (36%), Gaps = 46/352 (13%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L+     L FLF+       Y   +   I I+V+ A   +++ G  G  SL      AIG
Sbjct: 9   LSFFIIALAFLFISPYFFNDYKIGILSNIAIFVILAVSYNLINGVTGQFSLEPNGFVAIG 68

Query: 78  AYSYVI--------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           AY   +                    +   +  S  + +  + + +    +I+     + 
Sbjct: 69  AYVAALVLLTSESKIDQFSLEDPSSFILMIHSPSFIVALLAAGLCAMLLSLILAFAVFRV 128

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL    I + + I +  +TNG  G+    +                      
Sbjct: 129 RGDYLAIVTLGFGIIIKLMAINFASVTNGSLGLNDIPKHT-------------------- 168

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                  Y   G+   S  IIL +  +    A + +RD++ A  ++       K  AF+ 
Sbjct: 169 -----TLYWSGGIAIFSVIIILNIVSSKFGRAMKAVRDDEDAALAMGINTFNIKTLAFST 223

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           S+   G+ G   A +   +SP+ F F     ++ I++LGG+ S +       ++IG  E 
Sbjct: 224 SAFLEGVGGGLLACALASVSPEQFDFLFTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEY 283

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
              ++    N       +       +  I L LV+L     ++  +  ++ L
Sbjct: 284 LRFLDES-MNIFGYETPAMPGLRMVVFSIVLILVMLFARRGIMGDKELTDIL 334


>gi|313496992|gb|ADR58358.1| Inner-membrane translocator [Pseudomonas putida BIRD-1]
          Length = 339

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 60/337 (17%), Positives = 121/337 (35%), Gaps = 30/337 (8%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            L + K      L  VV  L+    L  +       ++  +ILI+ M A   ++++G  G
Sbjct: 6   PLPVAKGRAPALLSLVVASLVALPLLLPSA------TLATEILIFAMAALACNLLLGYTG 59

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           LLS    I + +GAY   +L       ++  +  +A+      +++G  +++  G Y  +
Sbjct: 60  LLSFGQGIFFGVGAYGAALLMIHLQWGMFAALLGAAVFGALLALLVGALAIRRTGIYFVM 119

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL  S++   +       T G  G+    R           I         +      Y
Sbjct: 120 LTLAFSQMAYFLAYTLSDWTGGDNGLLDVPRP---------NIEIAGHVLVDLADPRHFY 170

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +  +  L  +  L + R+   +    IR+N+    ++       K+  F +S A  G+
Sbjct: 171 VFVAVLFLLIFAAALRVIRSPFGSTLLAIRENETRAAAIGYDTRHFKILVFMLSGAITGI 230

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA +A               +  ++ + I+GG  SL         ++ + ++   +   
Sbjct: 231 AGALYAMLLHFAPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGAIVLLGDVLSELWPR 290

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +                 L+ + L LV++     L  
Sbjct: 291 W---------------LMLLGVILILVVVFMRGGLWG 312


>gi|154245807|ref|YP_001416765.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154159892|gb|ABS67108.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 356

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 66/329 (20%), Positives = 128/329 (38%), Gaps = 20/329 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             +      ++          +YI S+ IQI    + A GL+I+VG  G +S+   + + 
Sbjct: 27  LTMLFCVAGVVLACFAPFFFSRYILSLMIQIGYLGIAALGLNILVGFSGQISVGHAVFFG 86

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            G ++   L  +      L I ++ + + A G++ GLP+ + +G YLAIATL    I Q+
Sbjct: 87  FGGFASAFLADKGVPVP-LAIVLAGLWTTAVGLLFGLPAARVKGLYLAIATLAAQFILQD 145

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             ++ +  T G  G   A    F          F+      V+                 
Sbjct: 146 FFVRAEWFTGGTHGAMAAPFTLFGYDLSGDDRYFYVVLFFVVVMY--------------- 190

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L R+    A   +RD+  +   +   +   +  AF +SS + G+ GA +A     
Sbjct: 191 LGAANLMRSRDGRALIAVRDHYLSAEMMGVNLTKYRTMAFGISSFYAGIGGALYAHYVGF 250

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE----LCCGMNFYYFNSLLK 311
           +S +      +I  + ++I+GG+ S+      T  ++ + E    L   ++    + +L 
Sbjct: 251 MSVEGLDILFSIQFLGMIIIGGLGSIMGSLMGTIFMVLLPEATGWLASALSGSVIDQVLH 310

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                      L+ + + L ++     L 
Sbjct: 311 LKDGLTYMREMLIGLTIILFLIFEPDGLA 339


>gi|182434976|ref|YP_001822695.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|178463492|dbj|BAG18012.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 383

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 74/336 (22%), Positives = 133/336 (39%), Gaps = 16/336 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            V    L L +      ++    G+  +   + A GL+++ G+ G LS+      A+GAY
Sbjct: 33  AVLIGSLLLLVLPFYLDRFWLQAGLFAMAAAIGAIGLNMLTGATGQLSMGHAFFLAVGAY 92

Query: 80  SY-----------VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
            Y               +  GL  WL   ++ +++GA G I    + + RG YL IATL 
Sbjct: 93  GYSVLAGESGTENGHALTGLGLPTWLAAILAVLLAGAAGGIFSPIAGRLRGAYLGIATLA 152

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +  I Q++L     +T G  G  V     F  T   S +     P        +   + L
Sbjct: 153 LIFIGQHVLFNAGSLTGGYNGRNVPPLSVFGFTFDDSELVVAAVPFGSSEKLWYAGLLAL 212

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  L A  +L  R      A   IRD++ A   +   +   +   F +SS + G+AG  
Sbjct: 213 LLSALFARGVLRGR---PGRAMNAIRDHRIAAGVMGVPVARYRAGVFVLSSMYAGLAGVL 269

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--YYF 306
            A    R  P+ F    ++  ++++++GG+ S++      A +  + ++    +      
Sbjct: 270 LALVFQRTVPEYFGMILSLEYLAMIVIGGLGSVAGAVVGAAFVSLLPQVFTHYSDSLPLV 329

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           ++      +       L   A+  V+L     L RL
Sbjct: 330 SAPGTGGLAPGEASRYLYGAAVVAVVLFLPGGLARL 365


>gi|163740308|ref|ZP_02147702.1| ABC branched-chain amino acid family transporter, fused ATPase and
           inner membrane subunit [Phaeobacter gallaeciensis 2.10]
 gi|161386166|gb|EDQ10541.1| ABC branched-chain amino acid family transporter, fused ATPase and
           inner membrane subunit [Phaeobacter gallaeciensis 2.10]
          Length = 602

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 55/321 (17%), Positives = 119/321 (37%), Gaps = 43/321 (13%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI----------------- 83
            +     I ++   G+ +  G+ G+LS   +   AIGAY+  +                 
Sbjct: 36  RVLSVFFISLIAVVGMGVYSGNSGILSFGHLSFMAIGAYASALLTLPAQLKVATLPKLPD 95

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
             +   L +     ++  ++    +++G+   K  G    I+TL +  I   I I W+ +
Sbjct: 96  WLATTELGLLPATLMAVFLTSVVALLIGMAIGKLEGSAAVISTLGLLIIVHGIAIGWRDV 155

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
           T G    +   R                             +V      ++  +    R 
Sbjct: 156 TRGSQTFFGIPRET-------------------------SLWVAAAGVVVALIVARLYRD 190

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           +      R  R+N  A  ++   I   +L +F +S+A + ++GA  A     ISP  F F
Sbjct: 191 SVSGLRLRAGRENAIAASAVGIRIRRERLVSFVISAALMALSGALIAHFLGAISPKKFYF 250

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           ++  ++++++I+GGMT+++        +  V E+       +  + L+    F      +
Sbjct: 251 TDTFLLLAMLIVGGMTTVTGAITGAVAITIVTEILRRFEGGFSLAGLEMPAVFGTTQIGI 310

Query: 324 MVIALFLVILMRSHSLLRLRT 344
             + +   +  + + L  L+ 
Sbjct: 311 -GLIILFAMFRKPNGLAGLKE 330


>gi|86136083|ref|ZP_01054662.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85826957|gb|EAQ47153.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 361

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 65/325 (20%), Positives = 132/325 (40%), Gaps = 17/325 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L V   LL   F       ++       +LI+ +   GL ++ G  G  SL      AIG
Sbjct: 22  LCVYGALLALAFALPYLIGEFYLGEVTNVLIWAIAGLGLMLLTGQTGQASLGHAAFLAIG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  IL  +      +  P++ +I+G  G+++ +P L+  G YLAIAT+ +S +  +I+
Sbjct: 82  CYANTILIEQGVP-FIIAFPLAGVITGFVGLLIAIPVLRLHGIYLAIATIALSVLADDII 140

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +  +  + G +G                +I  F F           YY++L +  +    
Sbjct: 141 VLTEHWSGGVSGK------------FPEMITIFGFEIERWSMPSRFYYLVLVVTIICTLF 188

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L R+ +  A+  +RD++ +  ++   I   K  AF +S    G AGA         +
Sbjct: 189 YRNLLRSPLGRAFAAVRDSEVSATAMGVHIARTKGKAFGLSCMITGWAGALMGYYAGTFN 248

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            + F    +I ++ ++++GG+ S+        ++  + +    +      +++    +  
Sbjct: 249 NETFSLVISITLLMMIVIGGLGSIHGAFFGAVVVAFLPQALSILKD----NVVGSGVAIP 304

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
              T +  + L + IL     +   
Sbjct: 305 GLETGVFGLILIMFILFEPMGIYGR 329


>gi|56696589|ref|YP_166948.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56678326|gb|AAV94992.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 651

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 46/336 (13%), Positives = 109/336 (32%), Gaps = 26/336 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +   A+     + L +G  ++            IY + A GL+I  G +G++++      
Sbjct: 337 VTAAALAALKSIELKVGVNQALDLTLDALSLASIYFLAAIGLAITFGVMGVINMAHGEFI 396

Query: 75  AIGAYSYVILGS---RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
            +GAY+  ++      + +SI + IP++  ++ A G+ M    +++      + TL+ + 
Sbjct: 397 MMGAYTGYVVQQLIPDHTISILVAIPLAFAVTFAAGVAMERLVIRW-LYARPLETLLATF 455

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                L +      G     +              +      +  V        +     
Sbjct: 456 GISIALQQLAKNIFGTQARPLTSP---------EWLDGALVLNDVVSISYIRIAIFFLAL 506

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
              A  +  ++RT +    R +  N +   S+        +  F + S   G+AG     
Sbjct: 507 MFLAVFLYIMKRTRLGLETRAVTQNPRMAASMGINPGRVNMLTFGLGSGIAGIAGVAIGL 566

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                S     +         V++GG+ ++        ++  + +    MN     +   
Sbjct: 567 FAKVTSELGSDYIVQS--FMTVVVGGVGNIWGTLAGATMIGFLQKGIEWMNPSNTLAAQT 624

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
           +   F +                R   ++ L+  + 
Sbjct: 625 YMIVFIIIFIQF-----------RPRGIIALKGRAA 649


>gi|57234269|ref|YP_181669.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein, putative [Dehalococcoides ethenogenes 195]
 gi|57224717|gb|AAW39774.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein, putative [Dehalococcoides ethenogenes 195]
          Length = 350

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 75/323 (23%), Positives = 142/323 (43%), Gaps = 16/323 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A++   L+ LF        Y   +   I I V+ A GL+I++G  G LS+      A+GA
Sbjct: 26  AMLIGFLILLFSLPFNISSYWLGIMNLIGITVVAAAGLNILMGYCGQLSVGHAGFIAVGA 85

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL S+ G+     +  S +++G  G++ GLPSL+ +G YLAI+T+    I   ++ 
Sbjct: 86  YTTAILASKLGVPFPFDMIASGIMAGLVGVLFGLPSLRVKGFYLAISTIAAQFIIIWVIN 145

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  +T G  GI +                     +     +   Y++++ +  L+   +
Sbjct: 146 HWSSLTGGFNGIVIPP---------------INLFNFDFTTQGSQYFIIMLVAVLAIFFM 190

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + RT I  A+  IRDN  A   +   +   KL AF +     G+AG+  A     ++ 
Sbjct: 191 KNIARTRIGRAFVAIRDNDLAAEVMGINVFKYKLLAFFIGCFLAGVAGSLMAHWIGYLTA 250

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F  S++I+ + IVI+GG+ +          +  + +    ++    ++  +    F  
Sbjct: 251 ENFTLSDSILYVGIVIIGGLGTGVGPIFGALFIRLLQQGVQYVSPLMGSAFPQLPSGFAA 310

Query: 319 -RHTTLMVIALFLVILMRSHSLL 340
                +  +A+ L +++    L 
Sbjct: 311 GLGPMVFGLAIVLFLVLEPRGLA 333


>gi|254460489|ref|ZP_05073905.1| inner-membrane translocator [Rhodobacterales bacterium HTCC2083]
 gi|206677078|gb|EDZ41565.1| inner-membrane translocator [Rhodobacteraceae bacterium HTCC2083]
 gi|297184436|gb|ADI20551.1| hypothetical protein [uncultured alpha proteobacterium
           EB080_L84F03]
          Length = 358

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 73/344 (21%), Positives = 133/344 (38%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ ++Y   + L       + F  +    +  + ++  +  LIY + A GL+I+ G  
Sbjct: 20  FPIKFDRYRYYVVLA------VAFGIIPFLINDYWANAFLLPFLIYSIAAIGLNILTGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +   ++I+  +  +  ++       GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKLMTAFPDVNIFFHVIAAGGVTAIVCTAFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  K     N                       F    +        
Sbjct: 134 AVATLAAQFFLVWLFNKVSWFYNYS---------ASGQINAPERTVFGVPVTGANTEAWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L    +SA I   L R      W  IRD   A   +    + AKLSAFAVS  FI
Sbjct: 185 TYLFCLVFLAISAIIARNLTRGMQGRKWMAIRDMDIAAEIIGVNPMRAKLSAFAVSGFFI 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F A         ++F   ++ +V+ ++I+GG+ S+       A L+ +      
Sbjct: 245 GISGALFFAVYLGAVEVGEVFGIQKSFLVLFMIIIGGLGSIFGSFAGAAFLVLLPVALKL 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +                     ++   + + ++   H + +L  
Sbjct: 305 VGVDLLGWPTDI---VAHIQLIIVGALIIIFLIAEPHGIAQLWR 345


>gi|311105598|ref|YP_003978451.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310760287|gb|ADP15736.1| inner-membrane translocator 25 [Achromobacter xylosoxidans A8]
          Length = 326

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 66/318 (20%), Positives = 123/318 (38%), Gaps = 36/318 (11%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             S  Y   + I  + + M A G +++ G  G  SL       +G Y+  +L   + + +
Sbjct: 34  GVSSPYWLGVLIVSMYFAMLACGWNLLAGYAGQFSLAPAAFAMLGGYTTGLLAYHWKVPL 93

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           WL +P+SA++ G  G+++G   L+  G YLA+ TL  +EI + ++      T G  G++V
Sbjct: 94  WLGLPLSAVVPGLVGLVLGRIVLRLSGPYLALTTLSFAEIVRLVIYNSIDFTRGDQGLHV 153

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                                 + +   +  YY+ L        +I  L R       + 
Sbjct: 154 P---------------------ALLESRVGNYYLFLAALAAVTLLIFLLLRARPGRFLQA 192

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           IRD++    S    ++  K  AF VS A  G AG  +      +SP++   ++  +VI++
Sbjct: 193 IRDDEIGAASRGIDVVRYKTLAFLVSCAICGFAGGLYGTFAQLVSPELGIVTQTGMVIAM 252

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           V++GGM +L        ++    EL   +                     +  + + +  
Sbjct: 253 VVIGGMGTLVGPLLGAVLVYVASELLRDV---------------GNIQMIVFALLVIIFA 297

Query: 333 LMRSHSLLRLRTPSNFLE 350
                 L  L   +    
Sbjct: 298 RFFREGLWGLARRAFLRR 315


>gi|28493526|ref|NP_787687.1| branched-chain amino acid ABC transporter permease protein
           [Tropheryma whipplei str. Twist]
 gi|28476568|gb|AAO44656.1| branched-chain amino acid ABC transporter permease protein
           [Tropheryma whipplei str. Twist]
          Length = 364

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 74/342 (21%), Positives = 136/342 (39%), Gaps = 29/342 (8%)

Query: 7   RLNKYDKILCLLAVVYPL-LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           R  ++  +L  + +VY L ++   +  T+           + IY + A GL++VVG  GL
Sbjct: 17  RPQQWFFLLPFVVLVYLLPIINPPVITTEPGNNFPISLFTMAIYALAAVGLNVVVGYAGL 76

Query: 66  LSLNCVIAYAIGAYSYVILGS----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           L L  +  +A+GAY   +  S       +     IPV+   +   G  +G+P+L+ RGDY
Sbjct: 77  LDLGYIAFFAVGAYVSAVFTSPDSPYVKIPYLWTIPVAIFTAMVFGAALGVPTLRLRGDY 136

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LAI TL   EI + +      +            L F              P       +
Sbjct: 137 LAIVTLGFGEIVRIMATIIPALRG---------NLGFSNVGHPPGDYPSGQPIFTPDNGV 187

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             Y+V + +      I+  L R+ +   W  I  ++ A   +       K+ AFA+ +A 
Sbjct: 188 AWYWVAITVVIFVLVIVGNLERSIVGRNWFAICQDEDAAEVMGVNTFSFKVWAFAIGAAI 247

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G++G+  AA    ++   F  + +++ +  V+LGG  +    A   A++  +      +
Sbjct: 248 GGLSGSLQAAQTGFVNNQRFDVATSVLFLVAVVLGGSGNKFGAAIGGALVAYIPLRFTEI 307

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
             Y                  +  + L L++L R   L  ++
Sbjct: 308 AQY---------------KYLIFGVCLILLMLFRHEGLFPMK 334


>gi|86139738|ref|ZP_01058305.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85823629|gb|EAQ43837.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 359

 Score =  106 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 69/307 (22%), Positives = 130/307 (42%), Gaps = 19/307 (6%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y       + IY +   GL ++ G  G +S       AIGAY++ IL +RY +   L 
Sbjct: 40  DGYFLDELSFVFIYAIAGLGLMVLTGFSGQVSFGQAAFVAIGAYTHTILLTRYSVPWLLS 99

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +P++A+++G  G+ +G    K  G YLAIATL ++ + + ++      T G  G+ V + 
Sbjct: 100 LPIAALVAGLVGLAVGRICGKMHGLYLAIATLSIAIVTERLIGGAGDFTGGHRGLSVPEI 159

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                    S                 +Y +   +      I+  L RT    A   IRD
Sbjct: 160 NILGLAIDESWK---------------VYLLNFVIFVGCILIVRNLTRTRSGRAMIAIRD 204

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ +  +L T + F K  AF +S+ F G+AG   A +   I+P+ F   E+I ++ ++++
Sbjct: 205 SEVSARALGTNVAFFKAYAFFISAVFAGLAGGLLAHAFFYITPETFGMGESIRLLLMIVV 264

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++         ++ +  +   +     +++     +     +    + L   IL  
Sbjct: 265 GGIGTIHGAVFGAFFIVLLPTVLSWVKIVLPSAV----ATSGGFDSLAFGLILLGFILFE 320

Query: 336 SHSLLRL 342
              L   
Sbjct: 321 PDGLYGR 327


>gi|320007524|gb|ADW02374.1| inner-membrane translocator [Streptomyces flavogriseus ATCC 33331]
          Length = 376

 Score =  106 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 76/355 (21%), Positives = 139/355 (39%), Gaps = 21/355 (5%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F+ RL +    L L   V  LL           ++    G+  +   + A GL+++ GS 
Sbjct: 25  FTGRLRRPAPYLWLAGSVLLLLF-----PFYLDRFWLQAGLFAMAAAIGAIGLNLLTGST 79

Query: 64  GLLSLNCVIAYAIGAYSY-----------VILGSRYGLSIWLLIPVSAMISGACGMIMGL 112
           G LS+      A+GAY Y               +  GL  WL   ++ +++GA G +   
Sbjct: 80  GQLSMGHAFFLAVGAYGYCVLAGESSTENGHALTGLGLPSWLAAVLAVLLAGAAGGLFSP 139

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
            + +  G YL IATL +  I Q++L     +T G  G  V     F  T   + +     
Sbjct: 140 IAGRLSGAYLGIATLALIFIGQHVLFNAGSLTGGFNGRPVPPLSLFGFTFDDAEVVVAAV 199

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
           P         ++Y+ L            + R     A   IRD++ A   +   +   + 
Sbjct: 200 PFQSSEK---LWYLGLAALLAGGLFARGVLRGRPGRALNAIRDHRIAAGVMGVPVARYRA 256

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             F +SS + G+AG   A    R  P+ F    ++  ++++++GG+ S++      A + 
Sbjct: 257 GVFVLSSMYAGLAGVLLALVFQRTVPEYFGMILSLEYLAMIVIGGLGSVAGAVIGAAFVS 316

Query: 293 GVVELCCGMNF--YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
            + ++    +      ++      +       L   A+  V+L     + RL+TP
Sbjct: 317 LLPQVLTHYSDSLPLVSAPGTGGIAPGEASRYLYGAAVVAVVLFLPGGIARLKTP 371


>gi|83950523|ref|ZP_00959256.1| Putative ABC transport system, permease protein [Roseovarius
           nubinhibens ISM]
 gi|83838422|gb|EAP77718.1| Putative ABC transport system, permease protein [Roseovarius
           nubinhibens ISM]
          Length = 300

 Score =  106 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 66/307 (21%), Positives = 133/307 (43%), Gaps = 16/307 (5%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y+ SMG  +  +++ A  L++  G  G+++      YA+GAY   +L ++ G+ + L 
Sbjct: 2   SAYLISMGTYVGFFMILALALNLQWGIAGMVNFGIAGFYAMGAYVSGLLVAKLGVPVGLA 61

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           IP + +     G  + L S++ R D+LAI TL + E+ + I++    IT G  G+ +  R
Sbjct: 62  IPAACVAGWVLGGAVALLSVRLREDFLAIVTLGVGEVIRLIVLNEDQITEGPRGLRIDGR 121

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
            +                    +Y +F   ++     ++  +   +RR  +    R IR+
Sbjct: 122 PF-------------GDLIGPELYPLFYLLLVAVCVLITYLVCERIRRAPMGRTLRAIRE 168

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +      L   ++  ++  FA+   F+G+AGA +A     ISP++F     + +   VI+
Sbjct: 169 DDVVAEVLGKNVLMHRVLTFAIGGFFMGLAGALYAHYVQNISPEVFMPVVAMFIWMSVIV 228

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  +   I      ++  +E    +  +   + +      +     L+   L + + +R
Sbjct: 229 GGAGNNRGILIGAGTVMIFLEGTRFIGDF---TDVLDAEKMSAMRIILIGFLLIVTLRLR 285

Query: 336 SHSLLRL 342
              LL  
Sbjct: 286 PRGLLPE 292


>gi|163789414|ref|ZP_02183853.1| hydrophobic amino acid uptake (HAAT) family ABC transporter,
           permease protein LivM [Carnobacterium sp. AT7]
 gi|159875268|gb|EDP69333.1| hydrophobic amino acid uptake (HAAT) family ABC transporter,
           permease protein LivM [Carnobacterium sp. AT7]
          Length = 324

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 73/342 (21%), Positives = 143/342 (41%), Gaps = 42/342 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            NK +    +      +L+ +         + +   + ILI V+ A GL++++G  G  S
Sbjct: 4   FNKKNFGWLIFIAAIYILIQVGTATGIINAFYEITLMTILINVILATGLNLIIGFSGQFS 63

Query: 68  LNCVIAYAIGAYSYVILGSRYG--LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           L      AIGAY   ++  +Y   L +   + +   I+    +++G+P+L+ +GDYLAIA
Sbjct: 64  LGHAGFMAIGAYCTGVISIKYPTVLGLMGGLLLGIAIASLVALLVGIPTLRLKGDYLAIA 123

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL ++EI + +++    ITNG AG+     +                             
Sbjct: 124 TLGVAEIIRIVILNMNDITNGAAGLSGIPFIANWQ------------------------- 158

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +      +S  +I+   +++   A  +IR+++ A  S+       K+ AF + +A   +A
Sbjct: 159 ITFAFIVISLIVIMNYIKSSPGRATISIREDEIAAESMGINTTKYKIIAFVLGAASAAIA 218

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G   A+    I P  F F +++ ++ IV+ GG+ S++    A  +L  +           
Sbjct: 219 GGLHASYFSVIRPADFTFMKSVDILIIVVFGGLGSMTGSVVAAIVLGILNVYLQ------ 272

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                     F      +  +AL  +++ R   LL  +  + 
Sbjct: 273 ---------PFGQLRMIIYSVALVAIMVFRPSGLLGTKEFTI 305


>gi|307316762|ref|ZP_07596204.1| urea ABC transporter, permease protein UrtB [Sinorhizobium meliloti
           AK83]
 gi|306897384|gb|EFN28128.1| urea ABC transporter, permease protein UrtB [Sinorhizobium meliloti
           AK83]
          Length = 537

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 94/297 (31%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++      S   L   S  I+     ++ 
Sbjct: 258 AAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLFEWSLAIALPLAFLVT 317

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       +   +     + +L  W      +  +              S      
Sbjct: 318 GAVGLALER--GVIRFLYGRPLETLLATWGISLILQQTVRTIFGPTNREVGNPSW-MSGA 374

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++++    + A+++  L++T +    R +  N++   S+     +  
Sbjct: 375 FELGGLAITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQNRRMASSMGIRTPWVD 434

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              FA+ S   G+AG   A S+             I    +V+ GG+ +L         L
Sbjct: 435 ALTFALGSGIAGIAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLVGAFSL 492

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             + +                          L+++ + L I  R   L  L+  +  
Sbjct: 493 GILNKFLEPYAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 536


>gi|332286346|ref|YP_004418257.1| inner-membrane translocator [Pusillimonas sp. T7-7]
 gi|330430299|gb|AEC21633.1| inner-membrane translocator [Pusillimonas sp. T7-7]
          Length = 323

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 66/320 (20%), Positives = 121/320 (37%), Gaps = 36/320 (11%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            A     Y   + I  + + + A G +++ G  G  SL       +G YS  +       
Sbjct: 32  PAFVQSNYWLGVLIVSMYFAIIASGWNLLAGYAGQFSLAPAAFAMLGGYSTALFAYHLQA 91

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +W+ +P++A+I G  G+++G   L+  G YLA+ TL  +EI + ++      T G  G+
Sbjct: 92  PLWIGLPMAAIIPGLVGLVLGRIVLRLSGAYLALTTLSFAEILRLVIYNSIEFTRGDQGL 151

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            V                      S +   +  YY+ L    L   +I WL R  +    
Sbjct: 152 TVP---------------------SLLDDRVAYYYLFLVALALVVGLIYWLLRRPMGRFL 190

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           + IRD++    S    ++  K  AF +S A  G AG  +      +SP++   ++  +VI
Sbjct: 191 QAIRDDEIGAASRGVDVLRYKTLAFLISCAICGFAGGLYGTFARLVSPELGLIAQTGLVI 250

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           ++V++GGM +L        ++    E+   +                     +    + +
Sbjct: 251 AMVVIGGMGTLVGPLIGALLVYTASEVLRDV---------------GNIQMIVFAFLVIV 295

Query: 331 VILMRSHSLLRLRTPSNFLE 350
                   L  L   S    
Sbjct: 296 FARYFREGLWGLLRRSMLRR 315


>gi|312864526|ref|ZP_07724757.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus downei F0415]
 gi|311099653|gb|EFQ57866.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus downei F0415]
          Length = 317

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 67/340 (19%), Positives = 134/340 (39%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     +  V   +L +         Y   + + I I ++   G ++V+G  G  +L 
Sbjct: 6   KLNLTWLAIVAVIYAILQVLASTGLLNLYYIQILMGIGISILMGLGTNLVLGFSGQFTLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+   Y      +  + + A+I+    +I G+P+L+ +GDYLAIATL
Sbjct: 66  QAGFMAIGAYASAIVTQYYPTYDGFYWSMLLGALIAALVAIIFGVPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            M+EI + I++    +TNG AG+                                    +
Sbjct: 126 GMAEIIRIIIVNGGTLTNGAAGLTGILPYTTWQV-------------------------I 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                +   ++L   R++       +R+++ A  S+   +   K+  F + +    +AG+
Sbjct: 161 FVFVVVITILVLNFLRSSTGRQIIAVREDEIAAESMGVNLTRQKVLVFVMGAVISAIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            + +    + P  F   ++I  + I ++GG+ S++    A  +L  +       +     
Sbjct: 221 LYVSYIGTVVPKDFTIMKSIDYLIIAVMGGLGSITGTIIAGVVLGILNMFLQNFSE---- 276

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  +AL LV++ R   LL  +  + 
Sbjct: 277 -----------LRMIIYSLALILVMIFRPGGLLGTKEFTL 305


>gi|190893141|ref|YP_001979683.1| urea or short-chain amide ABC transporter permease [Rhizobium etli
           CIAT 652]
 gi|190698420|gb|ACE92505.1| probable urea or short-chain amide ABC transporter, permease
           protein [Rhizobium etli CIAT 652]
          Length = 541

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 94/297 (31%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       IGAY+  ++      +   L   S   +     +  
Sbjct: 262 AAIGLAITFGVMGVINMAHGEMVMIGAYTTYMVQETIASAFPSLADYSLAFAVPAAFLFT 321

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                      ++   +     + +L  W      +  I              S      
Sbjct: 322 GLVGLVIER--SVIRYLYGRPLETLLATWGVSLILQQAIRSYFGPTNREVRNPSW-MSGA 378

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    ++      ++++    +  ++++ L+R+A     R +  N++   S+     +  
Sbjct: 379 FDFGGLVITWNRLWIIVFSLVVFLALLMLLKRSAFGLQMRAVTQNRRMASSMGIRTGWVD 438

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              FA+ S   GMAG   A S+          +  I    +V+ GG+ +L         L
Sbjct: 439 AFTFALGSGIAGMAGV--ALSQIDNVSPNLGQNYIIDSFMVVVFGGVGNLWGTLVGALSL 496

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +                          L+++ + L I  R   L  L+  +  
Sbjct: 497 GVANKFLEPFAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 540


>gi|85704376|ref|ZP_01035478.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. 217]
 gi|85670784|gb|EAQ25643.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. 217]
          Length = 358

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 83/344 (24%), Positives = 146/344 (42%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ ++Y   + L++       F  +    +  +++++ +  LIY + A GL+I+VG  
Sbjct: 20  FPIKFDRYRYYVVLVS------AFAVVPFVVNDYWVNAVFLPFLIYAIAAIGLNILVGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAYS   ++ S   +SI + I ++ +I+ A G++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYSVYKLMTSFPDVSILIHIILAGVITAAVGVLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N  A   ++           +                 
Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYSASGQISAPERSFLGVPVT---------GAETAPWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L     SA I   L R      W  IRD   A   +    + AKL+AFAVSS F+
Sbjct: 185 AYLFCLVFVVASAIIARNLTRGMAGRKWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFV 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F A         + F  +++ +V+ +VI+GG+ S+       A L+ +  L   
Sbjct: 245 GISGALFFAVYLGAVEVGEAFGINKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVLLKN 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                   L             ++   + + ++   H L +L  
Sbjct: 305 ---TLVGGLGWPTDLAAHLEFIIVGALIIIFLIAEPHGLAQLWR 345


>gi|220921109|ref|YP_002496410.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219945715|gb|ACL56107.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 343

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 65/347 (18%), Positives = 136/347 (39%), Gaps = 24/347 (6%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            +  +   +   L+  +        L       Y+ ++ I  ++Y   +   +I+ G  G
Sbjct: 14  PVPTHSAKRRRTLVVGLLVFAAMAALPYGVRDVYLQNVLILTVMYAALSQSWNILGGYCG 73

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            +SL   + + +GAY   +L   YG+  W  +    + S    +++G P  +  G Y +I
Sbjct: 74  QISLGHALYFGLGAYFTTVLFVNYGVLPWGGMLAGGLASALVALLLGYPCFRLAGHYFSI 133

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           AT++++EI   ++  W  +       +  +   +             +   F   ++  +
Sbjct: 134 ATIVIAEIGLLLVHNWDFVGGAMGIQWPFNPDSW-------------WTLQFARDKVPYF 180

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           +  LG+      +   +  +     WR ++D+ +A  SL   +  +K++A AVS+ F  +
Sbjct: 181 HFALGLFVAVWFVTYLIEESRWGYWWRAVKDDAQAAESLGVEVFRSKMAAAAVSAFFTAI 240

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISI-VILGGMTSLSKIAKATAILIGVVELCCGMNF 303
            G F+AA    I P+        ++ ++  +LGG+ +L       AILI + E+      
Sbjct: 241 GGGFYAAYVSYIDPESVMSFRFSLLFALPAVLGGIGTLWGALVGAAILIPLTEISRSY-- 298

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                      S +     L  + +  V L R   +L L   +    
Sbjct: 299 --------LGGSGSGLDLILYGLLVMGVALARPEGVLSLFRRTRTAR 337


>gi|134300080|ref|YP_001113576.1| inner-membrane translocator [Desulfotomaculum reducens MI-1]
 gi|134052780|gb|ABO50751.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Desulfotomaculum reducens MI-1]
          Length = 326

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 77/347 (22%), Positives = 140/347 (40%), Gaps = 42/347 (12%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M +F   L K   I   L  ++   ++L +       + +   I I I ++ A  L+++ 
Sbjct: 1   MLMFKRNLGKQIVIFMALLAIWG-SVYLLIQTGIINPFYELNLILIGINIILAVSLNLIN 59

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G  S+      AIGAY   I+  + GL   + +   A+++G  G+++GLP+L+ RGD
Sbjct: 60  GFNGQFSIGHAGFMAIGAYGAAIITIKAGLPFPVALLFGAVVAGIFGILVGLPTLRLRGD 119

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLAIATL   EI + +++    I  G  G+    ++                        
Sbjct: 120 YLAIATLGFGEIIRGVIVNIDYI-GGAYGLSGIPKMANWT-------------------- 158

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
                 +  +  L+  II     +    A  +IR+N+ A  ++       K+ AF + S 
Sbjct: 159 -----WVFWLTVLTVVIITNFINSTHGRATVSIRENEIAAEAMGINTTKYKVMAFTIGSF 213

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           F G+AG   A     I P  F F ++  ++ +V+LGG  S++    A   L  +      
Sbjct: 214 FAGLAGGLHAHYFYTIQPGTFNFLKSFDILVMVVLGGQGSITGSIIAAIGLTILSASLQS 273

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
           +                     +  + L ++++ R   L+  +  S 
Sbjct: 274 L---------------VSLRLVIYALLLIIIMIFRPQGLMGTKEFSL 305


>gi|304393633|ref|ZP_07375561.1| branched-chain amino acid ABC transporter, permease protein
           [Ahrensia sp. R2A130]
 gi|303294640|gb|EFL89012.1| branched-chain amino acid ABC transporter, permease protein
           [Ahrensia sp. R2A130]
          Length = 368

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 66/312 (21%), Positives = 135/312 (43%), Gaps = 14/312 (4%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
              ++  Y+      + I+ +   GL ++ G  GL SL      AIG Y+ V+L +    
Sbjct: 39  FFWQNDTYLLGEVTSVFIFAIAGLGLMMLTGQTGLASLGHAAFMAIGCYANVLLLNAGVP 98

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + +  P++ +I+GA G  + +P ++  G YLA+ATL +S +  + ++  +  T G AGI
Sbjct: 99  WL-IAFPLAGLIAGALGTFIAMPVMRLHGVYLALATLALSVLMVDFIVLGEDFTGGVAGI 157

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            V D            I  F F  +        YYV+LG+C ++ +    + R+    ++
Sbjct: 158 SVPD------------ISLFGFTVNRYANPYAFYYVVLGVCLITVAFYRNIVRSPTGRSF 205

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             IRD++ +  ++       K  AF +S +  G+AGA F  +   ++ + F    +I ++
Sbjct: 206 AAIRDSEISARAMGVDPAKTKALAFFLSCSIAGLAGALFGHNATYVTHETFDIVMSITLL 265

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            ++++GG+ ++        ++  +  +       + ++      +       +    L  
Sbjct: 266 LMIVIGGLGTIHGAFLGAIVVGLIPVIIAN-ARTWLSTSFDITGNIPGIEQAIFAAILIG 324

Query: 331 VILMRSHSLLRL 342
            IL     L   
Sbjct: 325 FILFEPMGLYGR 336


>gi|296162849|ref|ZP_06845630.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295886886|gb|EFG66723.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 351

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 57/305 (18%), Positives = 118/305 (38%), Gaps = 24/305 (7%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           S+  ++L++ + A G ++++G  GLLS    I + +G+Y   ++ +R  L + + +  +A
Sbjct: 49  SLATEVLVFALAALGCNLLLGYTGLLSFGQGIFFGLGSYCAGLVLTRTALPVPVALFAAA 108

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +I  A   ++G  S++ RG Y  + TL   ++F  +      +T G  G+    R     
Sbjct: 109 IIGAAAAALVGWFSIRQRGTYFVMLTLAFGQLFYFLAYTTPDLTGGDNGLLDIPRPA--- 165

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                 +  F      +      Y  +  +  +   +++ +  +        IRDN+   
Sbjct: 166 ------LGLFGKTIVPLTSPWQYYGFVAVLFLVVFWLLMRVSHSVFGRTLLAIRDNEARA 219

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++   +   KL AF +S A  G+AGA  A            +  + +++ + ++GG  +
Sbjct: 220 AAVGYDVKRFKLMAFVISGAVTGLAGALHALMTGIAPLSNIDYHTSEMILVMTVIGGTGN 279

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L       A  +   +    +   +                 L+ I L  V L     L 
Sbjct: 280 LFASVLGAAFYVLFADWLSTLWPRW---------------LLLLGIVLIAVSLFMQRGLW 324

Query: 341 RLRTP 345
            L   
Sbjct: 325 GLGER 329


>gi|84686569|ref|ZP_01014462.1| branched-chain amino acid ABC transporter, permease protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84665482|gb|EAQ11959.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 398

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 71/368 (19%), Positives = 134/368 (36%), Gaps = 28/368 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLS 57
           M   S R   +  I+  L +V P+LL  F   +    +      +  +  I+ +FA G +
Sbjct: 3   MLGLSQRDTTFLLIVVFLTLVTPILLQPFPEGSGMATFNAGYPDLMQRFAIFGIFAIGFN 62

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I+ G  G LS        +G+YS V +    G ++   I ++ ++S    +++G  SL+ 
Sbjct: 63  ILFGLTGYLSFGHAAFLGVGSYSVVWMYKLLGYNVVPGILLAVIVSALFALLIGYVSLRR 122

Query: 118 RGDYLAIATLIMSEIFQNILIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS-- 174
            G Y +I TL  +++  N+      P+TNG+ G+ V      +     S      F    
Sbjct: 123 SGIYFSILTLAFAQMSYNLAYSVLTPLTNGETGLQVYTNDPQVLMGENSPTSPHFFGIVM 182

Query: 175 ---------SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                     +       YY    +  L   + L + R+      R I+ NQ        
Sbjct: 183 NESAKLNVGGWEFTFNNGYYFCAIVAILVFYLSLRIFRSPFGLMLRAIKTNQTRLNYTGL 242

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                 L+AF +S  + G+AGA  A+       +  +++ +  V+ + ILGG  +L    
Sbjct: 243 NSRPYTLAAFVISGMYAGLAGALMASMDPLAGAERMQWTASGEVVLMTILGGAGTLMGPI 302

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVI 332
                +     +   +N    +    +                        + +   LV+
Sbjct: 303 LGAGFIKYFENIFSKINDNMLHQWFAWMPDGIEDFLIGLSHFFVGKSWHLTLGLLFMLVV 362

Query: 333 LMRSHSLL 340
           +     L+
Sbjct: 363 IFLPGGLV 370


>gi|158426210|ref|YP_001527502.1| ABC-type branched-chain amino acid transport system permease
           component [Azorhizobium caulinodans ORS 571]
 gi|158333099|dbj|BAF90584.1| ABC-type branched-chain amino acid transport system permease
           component [Azorhizobium caulinodans ORS 571]
          Length = 356

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 67/327 (20%), Positives = 126/327 (38%), Gaps = 20/327 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +      ++ L         Y+ S+ IQI    + A GL+I+VG  G +S+   + Y  G
Sbjct: 29  MLFCVAGVVALACAPLVLSSYLLSLLIQIGYLGIAALGLNILVGFSGQISIGHAVFYGFG 88

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            ++   L         L I ++ + +   G++ G+P+ + +G YLAIATL    I Q+  
Sbjct: 89  GFASAFLAEHGVPVP-LAIILAGLWTTVVGLLFGVPAARVKGLYLAIATLAAQFILQDFF 147

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++    T G AG   A               F+     FV+  +                
Sbjct: 148 VRATWFTGGSAGAVAAPFTILGFDMSGDHRYFYVVLVFFVVLYLG--------------- 192

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L R+    A   +RD+  +   +   +   +  AF +SS + G+AGA +A     +S
Sbjct: 193 ASNLMRSRDGRALIAVRDHYLSAEMMGVNLTKYRTMAFGISSFYAGIAGALYAHYIGYMS 252

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK----FD 313
            +      +I  ++++I+GG+ S+      T  ++ + EL   +      S +       
Sbjct: 253 VEGLDILFSIQFLAMIIIGGLGSVMGSLFGTIFMVLLPELTGALAGALQGSAIDKALHLK 312

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLL 340
                    L+   + L ++     L 
Sbjct: 313 DGITYLREMLIGAVIILFLIFEPDGLA 339


>gi|148257364|ref|YP_001241949.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. BTAi1]
 gi|146409537|gb|ABQ38043.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 332

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 73/337 (21%), Positives = 125/337 (37%), Gaps = 30/337 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+A+   ++  L +      +Y   +  Q  +  + A GL++ +G  G +SL      
Sbjct: 7   LLLVALAIIVIAGLIIIPMNFNRYGLYILSQWAVMTIAAMGLNLTLGYAGQVSLAQGAFV 66

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IGAY   IL +     +   + +  +I    G ++G P+L+ +  YLA  TL  S +  
Sbjct: 67  GIGAYGAAILTTHGWP-LISALGLVIVICFIVGWLLGYPALRVQHHYLAFVTLAFSTLMF 125

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +TNG  GI    R                         +  YY+ LG   L 
Sbjct: 126 LVFRNESWLTNGIYGISNIPRPEIF--------------GFPTRKPLPFYYLCLGSLGLV 171

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              + WL R+    A+  +R+N     SL        L AFA+ SA  G+AG  +A    
Sbjct: 172 TLAMWWLIRSPWGRAFMALRENPIRAQSLGIDTRRYTLMAFAIGSALGGIAGVLYAPLTQ 231

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            + P  F    ++ ++ +VI+GG   +        I + + E       YY         
Sbjct: 232 YVDPVPFNLQLSLDLLMMVIVGGSGFMLGPFLGAMIAVLLPEWLRFAEGYY--------- 282

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                   L   A+  +++     +L +        R
Sbjct: 283 ------LMLYAAAVIALLIYSPSGILGILDRYLSSRR 313


>gi|239814235|ref|YP_002943145.1| ABC transporter [Variovorax paradoxus S110]
 gi|239800812|gb|ACS17879.1| ABC transporter related [Variovorax paradoxus S110]
          Length = 631

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 106/311 (34%), Gaps = 10/311 (3%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                ++  S+   I +Y + A GL ++ G  G+ S        +GAY+   + +    +
Sbjct: 38  WGFLPEFTVSVLSNIGLYALVAAGLVMLTGVGGMTSFGQAAFVGMGAYATAWICTSPMAA 97

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            WL   V   +    G+++GL         L   TL +   +  +               
Sbjct: 98  AWLGGAVGPALLPWAGLMLGLAFTFALAWALGAVTLKLQGHYLPLCTIA---WGLSLYYL 154

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           + +  +  G T  + +         +     +  V+  +  L+   +  L  +    A R
Sbjct: 155 LGNMDFLGGQTGITGVPPLVIAGYSLATPRALGVVIWAVLLLALWAMHNLLDSREGRAIR 214

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            ++  +    S+       ++  F +++    ++G  +A  +  ++P  F  +  I ++ 
Sbjct: 215 ALKGGRLMAESMGVDTARHRVKLFVLAALLAAVSGWLYAHLQRFVNPTPFNLNIGIELLF 274

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           + ++GG   L       A++  + E    +      S   F          +  + +  V
Sbjct: 275 MAVVGGAGHLWGAVLGAALITLLKEKLQDVLPSLLGSSGNF-------EVIVFGLLMLFV 327

Query: 332 ILMRSHSLLRL 342
           +   +  L   
Sbjct: 328 LQRFADGLWPT 338


>gi|108804852|ref|YP_644789.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
 gi|108766095|gb|ABG04977.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
          Length = 385

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 88/369 (23%), Positives = 157/369 (42%), Gaps = 32/369 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            +     +++   L+  F+       ++ +  I + ++V+ A GL+IVVG  GLL L  V
Sbjct: 3   RRYALPASLIAAALVLPFVDRALGTDFLFT-AIVVAVFVLLALGLNIVVGFAGLLDLGFV 61

Query: 72  IAYAIGAYSYVILGSRY-----------------------GLSIWLLIPVSAMISGACGM 108
             YA+GAY    L S +                        +S WL++ ++A  +  CG+
Sbjct: 62  AFYALGAYVCGWLASTHFRQVSFSLGSTARSLTGEPLPGIHISFWLILIIAAAFTALCGV 121

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
           I+G P+L+ RGDYLAI TL   EI     +    +                   +  +  
Sbjct: 122 IIGAPTLRLRGDYLAIVTLGFGEIIPRFFLNGDNLFGFNLTNGTIGIKAIDAPGIPFVPF 181

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                 S +    + YY +L +  L+  + + L+ + +  AW ++R+++ A  ++    +
Sbjct: 182 ESWQRFSQLDLSPW-YYTILALVLLTVFVNVRLQNSRLGRAWISVREDETAAAAMGINPV 240

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
             KL A+A+ + F G+AGAF+ A    I P  F FS +I+++ +VILGGM ++  +    
Sbjct: 241 TTKLWAYALGAVFGGIAGAFYGAFIKNIFPTSFSFSISILILCMVILGGMGNIYGVILGA 300

Query: 289 AILIGVVEL-------CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            +L  +                    S           +  L  + L LV+L+R   L+ 
Sbjct: 301 IVLQAINRYLLPQLNDLVHALGDALGSEALSQADIPKYNFLLFGLLLVLVMLLRPEGLIP 360

Query: 342 LRTPSNFLE 350
            R  +  L 
Sbjct: 361 NRQRAEELH 369


>gi|56421513|ref|YP_148831.1| branched-chain amino acid ABC transporter permease [Geobacillus
           kaustophilus HTA426]
 gi|261420415|ref|YP_003254097.1| inner-membrane translocator [Geobacillus sp. Y412MC61]
 gi|319768081|ref|YP_004133582.1| inner-membrane translocator [Geobacillus sp. Y412MC52]
 gi|56381355|dbj|BAD77263.1| branched-chain amino acid ABC transporter (permease) [Geobacillus
           kaustophilus HTA426]
 gi|261376872|gb|ACX79615.1| inner-membrane translocator [Geobacillus sp. Y412MC61]
 gi|317112947|gb|ADU95439.1| inner-membrane translocator [Geobacillus sp. Y412MC52]
          Length = 324

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 71/344 (20%), Positives = 140/344 (40%), Gaps = 42/344 (12%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  +   +  +LA  +  ++   + +     +  +    + I VM A  L +++G  G  
Sbjct: 5   KRTRGFWVSVILAFAFFAVVEWLIASGTLNVFYVNTLFFMAINVMLAASLHLIIGITGQF 64

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S+     +A+GAY+  ++  +  L   + +  + + +   G+++G+PSL+ +GDYLAIAT
Sbjct: 65  SIGHAGFFAVGAYASAVMTMKLQLPFAVGVLTAGIAAMLAGLVIGVPSLRLKGDYLAIAT 124

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI +  L+    +                                  +  +  +  
Sbjct: 125 LGFGEIVRIALLNIDYVGGAS---------------------------GMTVTHMTTWPW 157

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +    F++  +I     +    A  +IR+++ A  ++     + K++AFA+ S F G+AG
Sbjct: 158 VFACLFVTILVIANFTNSTHGRACISIREDEIAADAMGINTTYYKVAAFAIGSFFAGIAG 217

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A +A     I P  F F ++  ++  V+LGG+ SLS    A  +L  V            
Sbjct: 218 ALYAHHFYIIQPSNFGFLKSFDILIFVVLGGLGSLSGAVVAAVLLTIVSTFLQNY----- 272

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                           +  I L LV+L R   L+  +  S+  +
Sbjct: 273 ----------PETRMIIYSIVLILVMLYRPTGLMGTKELSSLFK 306


>gi|84501433|ref|ZP_00999638.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
 gi|84390724|gb|EAQ03212.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
          Length = 358

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 80/351 (22%), Positives = 147/351 (41%), Gaps = 21/351 (5%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F +R ++Y     L       + FL +    +  + +++ +  LIY + A GL+I+VG  
Sbjct: 20  FPIRFDRYRYYAVLA------VAFLIVPFVINDYWANAVLLPFLIYAIAAIGLNILVGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +   ++I+  I ++  I+   G++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYATYKLMTAFPDINIFFHIVMAGGITAIVGVLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N                       F +  +        
Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYN---------NSASGQINAPERTVFGQAVTGPATEAWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L     SA +   L R A+   W  IRD   A   +    + +KL+AFAVSS F+
Sbjct: 185 TYLFCLVFTVASALLARNLTRGAMGRRWMAIRDMDIAAEIIGVNPLISKLTAFAVSSFFV 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G+AGA F A         +++  +++ +V+ ++I+GG+ S+       A L+ +  L   
Sbjct: 245 GIAGALFFAVYLGAVEVGEVYGINKSFLVLFMIIIGGLGSIFGSFAGAAFLVLLPVLLKN 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +              F      ++   + + ++   H L +L   +    R
Sbjct: 305 VLVGTLGWPTGLASHF---EIMILGFLIIVFLVAEPHGLAQLWRVTKEKLR 352


>gi|76818994|ref|YP_336949.1| sugar ABC transporter permease [Burkholderia pseudomallei 1710b]
 gi|76583467|gb|ABA52941.1| sugar ABC transporter, permease protein [Burkholderia pseudomallei
           1710b]
          Length = 835

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/314 (11%), Positives = 87/314 (27%), Gaps = 29/314 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ V   ++L        + +    +  Q  I  + A G++ V+     + L+     
Sbjct: 537 IPIVFVALCVVLAFASPYFLTWRNWSDILRQTSINGILAIGMTYVI-LTKGIDLSVGSVL 595

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      + G+        +   + +  GA    +   ++        +ATL M  + +
Sbjct: 596 ALAGIVSGLAGAAGH--GLAVSLAAGVACGAALGAINGVAIARLNVPPFVATLGMLSVAR 653

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                         G+            +              +    + +  + +    
Sbjct: 654 --------------GVTYIANDGSPVANLPDDYLSLGIGRLGPLGMPVLIFAGVALACWW 699

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                  R T        +  N+K+  +    +     S + VS A  G+AG   AA   
Sbjct: 700 VL-----RYTTYGRYLYAVGGNEKSARTSGIGVRKVVFSVYVVSGALAGLAGMILAARTT 754

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                    S  +  I+ V++GG         +        ++  +      +    +  
Sbjct: 755 SA-LPQAGVSYELDAIAAVVIGGTSLSGGQGGVVGTLFGALLIGVINNGLNLLGVSSYYQ 813

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 814 QIAKGLIIVLAVLI 827


>gi|330470596|ref|YP_004408339.1| inner-membrane translocator [Verrucosispora maris AB-18-032]
 gi|328813567|gb|AEB47739.1| inner-membrane translocator [Verrucosispora maris AB-18-032]
          Length = 342

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 56/312 (17%), Positives = 119/312 (38%), Gaps = 29/312 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                  Y   M  Q+L + +   GL I+ G  G +SL       +GAY+  ++ +    
Sbjct: 41  PPLLFDDYWVFMAAQVLAFAVATLGLDILYGRTGQMSLAHASFMGVGAYTTYVMATHGYG 100

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              + +     ++    +++ +P+L+  G  LA+ TL   E+    +     +T G  G 
Sbjct: 101 -PAMQLAAVIGVALVAALVVSVPTLRLSGMRLALVTLAFGELLAWAIRNTTDLTGGTQGA 159

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            V                 F+F        +  Y + L    ++ +  + L RT +    
Sbjct: 160 SVDP---------------FQFGRLDSSEPLHAYLIALVPAAIATAFAVHLGRTQLGRRM 204

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +RD++ A  S+   +   K++AF +S+ + G+AG  +A     I+P  F    ++ + 
Sbjct: 205 LAVRDSELAAESVGVAVARTKITAFLISAVYAGVAGWLYAGITGFIAPPDFDLFASVYLF 264

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
             V++GG  ++       + ++ + E+                      +  +    L +
Sbjct: 265 VAVVIGGAGTVLGAWLGASYVVLMPEVFTLAGQ-------------PNLYPIVGGALLAI 311

Query: 331 VILMRSHSLLRL 342
           V L+    ++ L
Sbjct: 312 VALVVPDGIVGL 323


>gi|328953697|ref|YP_004371031.1| ABC-type transporter, integral membrane subunit [Desulfobacca
           acetoxidans DSM 11109]
 gi|328454021|gb|AEB09850.1| ABC-type transporter, integral membrane subunit [Desulfobacca
           acetoxidans DSM 11109]
          Length = 318

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 73/325 (22%), Positives = 136/325 (41%), Gaps = 29/325 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           LL+ V   LL    G      Y  ++   I + V+   GL++++G  G +SL     Y +
Sbjct: 7   LLSAVCFFLLVALCGGLLQGTYYFTLLNLIGLNVIVVLGLNLLMGYAGQISLGHAAFYGL 66

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G+Y   IL + Y +   L +     +SG   +++G+P+LK RG YLA+ATL    I   +
Sbjct: 67  GSYVSGILTATYSVDPLLALLAGLAVSGLVALVVGIPALKLRGYYLAMATLGFGIIISIV 126

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
             +   +T G +G+         G    +                  ++++         
Sbjct: 127 FQELSWLTGGPSGLMGIPSFRLAGFNFDT--------------PRTSFFLVWSAAGFILI 172

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           + L +  + +  A R I D++ A  ++       KL  F VS+ +  +AG   A + + I
Sbjct: 173 LSLNIVDSRVGRALRAIHDSETAALAMGIDAQRMKLLIFVVSALYASLAGGLLAHTINFI 232

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +P  + F  +I ++++V++GGM S+       A+L  + EL                   
Sbjct: 233 APSSYGFMFSIKLVTMVVVGGMASIWGSLLGAAVLTVLPELLAFF--------------- 277

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
           +     +  + L +V++     LLR
Sbjct: 278 HDLEVVIFGLILMVVMIFMPRGLLR 302


>gi|121610758|ref|YP_998565.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121555398|gb|ABM59547.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 315

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 68/312 (21%), Positives = 121/312 (38%), Gaps = 24/312 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 KY   + +  +++ M A G + + G  G +S+       +GAYS   L    GL
Sbjct: 19  PQVLQVKYFIHLAVLAMLWAMVAQGTNFIQGYAGYVSIVQGGFMGVGAYSSAWLSMNTGL 78

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +WL    + + +    + +G PSL+ +G Y AI T+  + +    L+    +T G++G+
Sbjct: 79  PVWLAFVAAPLCTAVVALCVGYPSLRVKGHYFAIVTMAFNMVIFIFLVNAIGLTGGESGL 138

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                        + +    R            YY++L     S+ +  WL R+     W
Sbjct: 139 SRIPAPPGFTLLGQEVDFQNRAH---------YYYLVLLALVCSSVLAAWLVRSRAGRIW 189

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           + IR N+    +L       KL AF  S+ + G AGA +A     I+P  F    ++  I
Sbjct: 190 QAIRQNEMYTEALGVATWRYKLLAFVASALYAGSAGALYAHYVGFINPTPFSVDASMNAI 249

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
             VILGG  +LS       +++ + E+                            + L L
Sbjct: 250 LAVILGGSATLSGPMVGAVLVVALPEMLR---------------IAETFRFIAYGVLLML 294

Query: 331 VILMRSHSLLRL 342
            ++     L+ +
Sbjct: 295 AVMYFPRGLVPM 306


>gi|327190920|gb|EGE57974.1| putative urea or short-chain amide ABC transporter, permease
           protein [Rhizobium etli CNPAF512]
          Length = 541

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 95/297 (31%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       IGAY+  ++      +   L   S   +     +  
Sbjct: 262 AAIGLAITFGVMGVINMAHGEMVMIGAYTTYVVQETIASAFPSLADYSLAFAVPAAFLFT 321

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                      ++   +     + +L  W      +  I              S      
Sbjct: 322 GLVGLVIER--SVIRYLYGRPLETLLATWGVSLILQQAIRSYFGPTNREVRNPSW-MSGA 378

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    ++      ++++    +  ++++ L+R+A     R +  N++   S+     +  
Sbjct: 379 FDFGGLVITWNRLWIIVFSLVVFLALLMLLKRSAFGLQMRAVTQNRRMASSMGIRTGWVD 438

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              FA+ S   GMAG   A S+          +  I    +V+ GG+ +L         L
Sbjct: 439 AFTFALGSGIAGMAGV--ALSQIDNVSPNLGQNYIIDSFMVVVFGGVGNLWGTLVGALSL 496

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             V +                          L+++ + L I  R   L  L+  +  
Sbjct: 497 GVVNKFLEPFAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 540


>gi|296158840|ref|ZP_06841669.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295891045|gb|EFG70834.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 325

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 74/320 (23%), Positives = 135/320 (42%), Gaps = 30/320 (9%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
             ++   L A  S  Y   +   I I+ + A GL+I+ G  G  SL     +AIGAY+  
Sbjct: 27  GFVVLYALIALFSGGYFVYLLNLIGIFALVAIGLTILTGFSGQTSLGHAGFFAIGAYASA 86

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           I   R+G+  WL IP++   +   G ++ LP+L+ +  YLAIATL    + Q ++ +W+ 
Sbjct: 87  IFAQRWGVPFWLAIPLAGAFATVIGALIALPALRLKDLYLAIATLGFGIVTQKVIFEWRT 146

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+ V     F  +                       +V+             L 
Sbjct: 147 VTGGGGGMQVPMPSLFGLSVADGSRM---------------AWVIAATLAAGTWAAFRLA 191

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            +    A   +R+++ A   +   +   K+ AFA+S+ +  +AG  +A     ++P+ F 
Sbjct: 192 SSRTGRALSMLRESETAAACIGIRVARYKVVAFALSAFYTAVAGGLYANVVRYVNPESFD 251

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + +I+ ++++++GGM S+       A  + V E   G                      
Sbjct: 252 VNMSIMFLAMIVIGGMGSVRGALLGAAFYVAVPEAFRGFKDAPG---------------L 296

Query: 323 LMVIALFLVILMRSHSLLRL 342
           +  I+L LV+++    L  L
Sbjct: 297 IFGISLMLVVILLPGGLTSL 316


>gi|171741088|ref|ZP_02916895.1| hypothetical protein BIFDEN_00154 [Bifidobacterium dentium ATCC
           27678]
 gi|171276702|gb|EDT44363.1| hypothetical protein BIFDEN_00154 [Bifidobacterium dentium ATCC
           27678]
          Length = 365

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 77/351 (21%), Positives = 141/351 (40%), Gaps = 42/351 (11%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           L + +   +  +   V   LL        +  Y+  + +   I V+    L++ +G LG 
Sbjct: 8   LSIKQSYLVCAIGVAVLFGLLMAVCETGVASLYVKGIIMTCCIAVIMTTSLNLTIGVLGQ 67

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLS---------IWLLIPVSAMISGACGMIMGLPSLK 116
           L+L C    AIGAYS  +L      +           L+     +++   G+++G+P+L+
Sbjct: 68  LTLGCCGFEAIGAYSAALLSKLLVANGVQMDATLRFLLVTFAGGVVACIFGILVGIPALR 127

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
             GDYLAI TL   EI + I+   K                      + L    +  +  
Sbjct: 128 LHGDYLAIITLGFGEIIRVIIQNLKVAGG------------------KGLSEGQQGQALI 169

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
            I  +   YV+  +  ++  ++    R+    A + IRD++ A  +    I + K+  FA
Sbjct: 170 GIDRLANLYVVFWITVVTVVLLFMFARSRYGRAVKAIRDDEIAAGASGINITYLKVMVFA 229

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           +S+ F G+AG  FA     ++P M  + ++I  + +V+ GGM SL+    A   L  + E
Sbjct: 230 ISAFFAGIAGGIFAQYIGALTPSMAGWLQSINYVIMVVFGGMGSLTGSIVAAVGLTILPE 289

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
           L    + Y                  +  + L L+++ R   +      S 
Sbjct: 290 LLRAFSEY---------------RMLVYSVVLVLIMVFRPQGIFGNWEFSL 325


>gi|152994980|ref|YP_001339815.1| inner-membrane translocator [Marinomonas sp. MWYL1]
 gi|150835904|gb|ABR69880.1| inner-membrane translocator [Marinomonas sp. MWYL1]
          Length = 540

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 98/297 (32%), Gaps = 21/297 (7%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            + GL+I  G +G++++       +GAY+  ++       I   I V+   +     +MG
Sbjct: 265 ASIGLAITFGVMGVINMAHGEMIMLGAYTTYVVQLIMPNYIDYSIWVAIPAAFLVSGLMG 324

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           +   +       +   +     + +L  +      +  +           +  S +    
Sbjct: 325 VLIERL------VICRLHGRPLETLLATFGISLILQQLVRTIFSPLNRQVSTPSWMSGSW 378

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
             +  +   +   Y+L     +   +++ L++T++    R +  N+    ++     +  
Sbjct: 379 EINPVLSLTLNRLYILAFALLVFIVLVIVLKKTSLGLNVRAVSQNRNMAKAMGVKTNWVD 438

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   +   +         S  I    +V+ GG+ +L     A   L
Sbjct: 439 AMTFGLGSGIAGIAGVALSQLTNV--GPNLGQSYIIDSFMVVVFGGVGNLLGTLVAAFTL 496

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +                  +  +    L+++ + L I  R   L   +  +  
Sbjct: 497 GIATKFLE-------------PTTGAVLAAILVLVFIILFIQKRPKGLFPQKGRAAE 540


>gi|154244385|ref|YP_001415343.1| ABC transporter related [Xanthobacter autotrophicus Py2]
 gi|154158470|gb|ABS65686.1| ABC transporter related [Xanthobacter autotrophicus Py2]
          Length = 863

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/324 (15%), Positives = 113/324 (34%), Gaps = 30/324 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V    L        +     +    +++  M    L+++VG  GL+S      + +GA
Sbjct: 30  LLVAAASLIALPSVLSALGLTLTSASDVVLLAMACMALNLLVGYTGLVSFGHGAWFGLGA 89

Query: 79  YSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           Y+  ++          +L   +A++     + +G   L+ RG Y ++ TL  + +  ++ 
Sbjct: 90  YAAALIQHHLLPGWGVVLALPAALVVALAAVPIGFVVLRRRGVYFSLLTLAFTALLFSVA 149

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +W  +T G+ GI    R                     +      Y V+  + F+    
Sbjct: 150 FRWTAVTGGENGIGGVRR--------------GALLGFDLETGTAFYAVVAVVMFVVVFK 195

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    R+ + +    IR+N++    +       K++ F +S+    +AGA    +    S
Sbjct: 196 LQRFVRSPMGSVLVAIRENEQRARFIGYDTRAYKIACFTLSAGVAALAGALMTFNHRFAS 255

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            D    + +  ++++V++GGM S    A      +   E        +            
Sbjct: 256 ADPIAVAFSGELLAMVVIGGMRSFLGPALGALFFVLFREFLSMWTPNW------------ 303

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                   +     I+     L+ 
Sbjct: 304 ---LFYFGLLFMAFIVYSPTGLVG 324


>gi|260778378|ref|ZP_05887271.1| urea ABC transporter permease protein UrtB [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260606391|gb|EEX32676.1| urea ABC transporter permease protein UrtB [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 549

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 98/306 (32%), Gaps = 21/306 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+   GL+I  G +G++++       +GAY+  ++         L + +S  +
Sbjct: 264 LSLGSVLVLAGIGLAITFGVMGVINMAHGELIMLGAYTTYVMQQLLPQQTGLALILSIPM 323

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++G+   +    +L    L      + +L  +      +  +           +
Sbjct: 324 AFLVSGLVGIVIERSVIRHLYGRPL------ETLLATFGISLILQQAVRSVFSPLNRSVS 377

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +      +  +       Y++L    +   +++ L++T +    R +  N+    +
Sbjct: 378 TPEWMSGALEINPMLSLTFNRLYIILFCAMVFIGLVMVLKKTPLGLQVRAVSQNRSMARA 437

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           F + S   G+AG   +   +         +  I    +V+ GG+ +L 
Sbjct: 438 MGIRSERVDAMTFGLGSGVAGIAGVALSQLTNV--GPNMGQAYIIDSFMVVVFGGVGNLW 495

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L    +L                         L+++ + L I  R   L   
Sbjct: 496 GTLVAGLSLGLFNKLLEPWAGAVLAK-------------ILVLVFIILFIQKRPRGLFPQ 542

Query: 343 RTPSNF 348
           R  +  
Sbjct: 543 RGRAAE 548


>gi|218295395|ref|ZP_03496208.1| ABC transporter related [Thermus aquaticus Y51MC23]
 gi|218244027|gb|EED10553.1| ABC transporter related [Thermus aquaticus Y51MC23]
          Length = 582

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 110/304 (36%), Gaps = 21/304 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             ++     I  + A  L ++ G  G+ S        +GAY+  +L  + G S WL + +
Sbjct: 21  YLTLLNFFAIAALVALSLYVLTGLGGMTSFAQAAFMGMGAYATALLTVKGGYSPWLGLLL 80

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++    +++G  +++ +G +L ++T+        +      +T G  G+     L  
Sbjct: 81  GLGLALVLALVLGGLTVRLKGHFLPLSTIAWQVALYILAGNLVGLTGGHTGLTDLPALVL 140

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  + +  R+       +   +                +  LR + +  A   +R +  
Sbjct: 141 FGLPLDNAFRYAFLSLFLLALLVLA--------------LHNLRESRLGRALLALRGDAL 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S        +L AF +S    G+AG  +A     ++P  F    +I  + + + GG+
Sbjct: 187 AAASFGVDPAALRLKAFLLSGFLAGLAGFLYAHFLRFVNPTPFSLEASIKYLVMAVAGGV 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++  +    A+  G+ +    +                   T    + L  ++++    
Sbjct: 247 GAIPGVLLGAALFTGLEDWLKDLLPLLLGRQ-------GNYETIAYGLILAAILILAPRG 299

Query: 339 LLRL 342
           L  L
Sbjct: 300 LWPL 303


>gi|326333439|ref|ZP_08199682.1| putative branched-chain amino acid transport system, permease
           component [Nocardioidaceae bacterium Broad-1]
 gi|325948744|gb|EGD40841.1| putative branched-chain amino acid transport system, permease
           component [Nocardioidaceae bacterium Broad-1]
          Length = 330

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 58/311 (18%), Positives = 122/311 (39%), Gaps = 6/311 (1%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++G Q +++ + A GL+I  G  GLL+       A+GAY   +    +    WL I ++ 
Sbjct: 14  ALGPQAIVFALAAIGLNIHFGYTGLLNFGQAGFVAVGAYGLAVSVVTFDAPFWLGIVMAL 73

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +      +I+G+P+L+ R DYLAI T+  +E+ + +    +          +        
Sbjct: 74  VAPLVLAVILGVPTLRLRADYLAIVTIAAAEVLRFVFGAVETKETFGGSNGLNGFARPFQ 133

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                         SF   +++   V   +  L   ++  L R+      R+IR+++ A 
Sbjct: 134 EANPYSSGIDLGIISFGRNDLWSLTVGWILVALCCVLVWALMRSPWGRVLRSIREDEDAV 193

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            SL   +   K+ A A+     G+ G F A  +  + P  +         + ++LGG   
Sbjct: 194 RSLGKNVFAYKMQALALGGVIGGLGGMFLALKQASVVPSDYSTLMTFYAFAALLLGGAAR 253

Query: 281 LSKIAKATAILIGVVELCCGMN------FYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +      + +   ++               +  S +  D   ++    ++ +A+ L+++ 
Sbjct: 254 VMGPVVGSVLFWFLIAGLGSFFSQSAGEGGWIPSAIMTDTQASVIRYIVLGLAIMLLMIF 313

Query: 335 RSHSLLRLRTP 345
           R   +   R  
Sbjct: 314 RPQGIFGDRRE 324


>gi|298246956|ref|ZP_06970761.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963]
 gi|297549615|gb|EFH83481.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963]
          Length = 357

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 73/343 (21%), Positives = 134/343 (39%), Gaps = 21/343 (6%)

Query: 3   IFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
            FS R+  +    CLL  +  L          S  +       I I+V+ A   +++ G 
Sbjct: 24  RFSGRMRGWIASACLLLFLLLLPTLYDGLFGGSANFELHRVSLIGIFVIAALAQNVLTGY 83

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
               SL     + +GAY      +      WL I V+ + S   G+I+G P+L+  G +L
Sbjct: 84  AAQPSLGNAAFFGVGAYMLAWTTNDLNWPFWLGILVAMLASAVLGVIIGGPALRISGAHL 143

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL +  I  ++L  W      +        L                   ++  +  
Sbjct: 144 AVATLGLVLITGSLLDLWDKAAGRQNYDLNTIPL-------------------WLSDDRA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +Y++++ +  L   +  +L R+ +  AW  IRD++ A  +    I   KL AF VS+   
Sbjct: 185 LYFLIIVVVALLLFLSFYLLRSRVGRAWIAIRDDETAAEAFGVNITRYKLLAFVVSAVLT 244

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+AGA +A      S  M    + I  ++++++GG+ S+         +  +  L   + 
Sbjct: 245 GLAGALYATWATTASSSMSSSDQTIAFLAMIVVGGLGSIVGSVLGALFVGFLPLLLGQLP 304

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                  ++         T +  + L L ++   H L  L   
Sbjct: 305 NPLVMGSMQI--QVATLTTGIYGLLLLLALIFFPHGLSGLVER 345


>gi|94312442|ref|YP_585652.1| ABC transporter-related protein [Cupriavidus metallidurans CH34]
 gi|93356294|gb|ABF10383.1| ABC-type transporter, ATPase and permease components [Cupriavidus
           metallidurans CH34]
          Length = 617

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 56/324 (17%), Positives = 129/324 (39%), Gaps = 22/324 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A +  +++   L    + ++  ++G  I +Y + A GL ++ G  G+ S        +G
Sbjct: 31  IATLAFVIVLALLPVLPTPEFWITLGNYIGLYSIVAIGLVLLTGVGGMTSFGQAAFVGLG 90

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYS   L +++GLS W+ + V  +I+  C  ++GL +++  G YL +AT+        + 
Sbjct: 91  AYSTAYLTTQFGLSPWIGLVVGLIITVLCAYVIGLITMRMSGHYLPLATIAWGLSLFFLF 150

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                +     G+     L   G  ++S                 M+Y++  +  L+   
Sbjct: 151 GNLDFL-GKYDGLNGIPVLSLFGIELQS--------------GRSMFYLIWAVVLLAVVA 195

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  +    A R ++       ++     + K+  F V++    ++G  +A  +  ++
Sbjct: 196 MHNLLNSRPGRAIRALKGGGTMAEAMGVNTAWMKVVIFVVAAMLACVSGFLYAHLQRAVN 255

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F  +  I  + + ++GG+  +        +L  + ++  G+      S   F     
Sbjct: 256 PTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGVLTILKDVLQGLLPKLLGSDGNF----- 310

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                +  + L L++      +  
Sbjct: 311 --EIIVFGVLLVLLLQYARDGIWP 332


>gi|94985309|ref|YP_604673.1| inner-membrane translocator [Deinococcus geothermalis DSM 11300]
 gi|94555590|gb|ABF45504.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Deinococcus geothermalis DSM 11300]
          Length = 541

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 72/304 (23%), Positives = 132/304 (43%), Gaps = 9/304 (2%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           + + + GL       GL+     +       +  +         WL + +S + +   G+
Sbjct: 205 FALASLGL-----VAGLILTARALLVLNAFRAQGLATGIDAGFFWLFLALSVLAAAIVGV 259

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
           ++GLP L+ +GDYLAI TL + E+ + +       + G  G      +          + 
Sbjct: 260 LIGLPVLRLKGDYLAIITLGLGEVIRVLANNLDLYSAGSQG---ITPIKSAPVPWFDRLA 316

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                       +F+Y ++L M  L  ++ + L R+ I  AW  IRD++ A  ++   ++
Sbjct: 317 GTLGFQPDQYSLLFLYMLVLVMIALILTVNIRLDRSRIGRAWIAIRDDEVAAQAMGVPLV 376

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
             KL AFA  ++F G  G  FAA +  ISP+ F   ++I V+S+VILGGM S   +    
Sbjct: 377 QTKLIAFATGASFAGAMGMIFAAKQTFISPESFNLFQSIGVLSMVILGGMGSFPGVILGA 436

Query: 289 AILIGVVE-LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
           A++  +   +  G+     N  +    +       +  + L  ++L+R   LL  R  + 
Sbjct: 437 AVVTLLNLRILPGLGEATANLGIPQQVNPGQLQRLIFGVILVTMMLLRPEGLLPNRRRTL 496

Query: 348 FLER 351
            L +
Sbjct: 497 ELHQ 500



 Score = 49.1 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 26/78 (33%), Positives = 36/78 (46%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
                     V    LL +   A +    +  + IQI+I+   A GL+IVVG  GLL L 
Sbjct: 75  WRAAPWAKALVGLGSLLLVLPWAGQEDTSLLDLSIQIMIFAALALGLNIVVGLAGLLDLG 134

Query: 70  CVIAYAIGAYSYVILGSR 87
            V  +A+GAY + I  S 
Sbjct: 135 YVAFFAVGAYIWGIFASP 152


>gi|222149559|ref|YP_002550516.1| ABC transporter membrane spanning protein (urea/amide)
           [Agrobacterium vitis S4]
 gi|221736541|gb|ACM37504.1| ABC transporter membrane spanning protein (urea/amide)
           [Agrobacterium vitis S4]
          Length = 542

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/319 (14%), Positives = 101/319 (31%), Gaps = 18/319 (5%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +    + + I        + ++ A GL+I  G +G++++       +GAYS  I+     
Sbjct: 241 VALWNTAQNITYGISLGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYSTFIVQQAIR 300

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
            +   L   S  I+      +             +   +     + +L  W      +  
Sbjct: 301 ANAPELFDWSLAIALPVAFAVTGIFGLVIER--CVIRFLYGRPLETLLATWGISLMLQQL 358

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +              S      F    +       ++L+    +  ++++ L+R+A    
Sbjct: 359 VRTLFGPTNQEVANPSW-MSGSFGLGGLTITWNRLWILVFSLSVFFALLMLLKRSAFGLQ 417

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R +  N++   S+     +     FA+ S   GMAG   A S+          +  I  
Sbjct: 418 MRAVTQNRRMASSMGIRTPWVDAFTFALGSGIAGMAGV--ALSQIDNVSPNLGQTYIIDS 475

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             +V+ GG+ +L         L  + +                          L+++ + 
Sbjct: 476 FMVVVFGGVGNLWGTLVGAFSLGILNKFLEPYAGAVLGK-------------ILVLVLII 522

Query: 330 LVILMRSHSLLRLRTPSNF 348
           L I  R   L  L+  +  
Sbjct: 523 LFIQKRPRGLFALKGRAVE 541


>gi|124268859|ref|YP_001022863.1| putative branched-chain amino acid transport system ATP-binding
           protein [Methylibium petroleiphilum PM1]
 gi|124261634|gb|ABM96628.1| putative branched-chain amino acid transport system ATP-binding
           protein [Methylibium petroleiphilum PM1]
          Length = 632

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 114/335 (34%), Gaps = 26/335 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +   L+ FL L    S        I+IL++ +F  G  I+ G  G+LS      +  G
Sbjct: 26  IVLALALMPFLLLAGGGS----VDTAIRILLWGIFGLGFDILFGYAGMLSFGQAAFFGTG 81

Query: 78  AYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           ++    +L S    +  L I    + S    +++G+ +LK  G Y ++ T  + E+   I
Sbjct: 82  SFVTAYLLVSGLVTNFLLAIGAGVVASMLFSVLVGMVALKRVGIYFSMITFAIGELCFFI 141

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G                 RS      +          MY V+  +   +  
Sbjct: 142 QHSVLSRWTGGDNGLPGVPHPVFQFGDRSFELASGWG---------MYAVIATIFVATFW 192

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               +  +         R N +   ++   +   K++AF V++ + G+AG      +  +
Sbjct: 193 FARRVVTSPFGRVLNATRINPERTLAVGHDVQRYKMAAFVVAAGYAGLAGTLMGIFQSYV 252

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
            PD F    +  V+   ++GG+ +L       A+ I + ++   +               
Sbjct: 253 GPDAFALDTSGQVVMQTVVGGVRTLIGPLVGAAVWIYLRDILQQI------------PGI 300

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 ++     L +      ++       +  R
Sbjct: 301 GGMWKLILGALFILAVTTMRRGIVGEIQHVFYKRR 335


>gi|229489018|ref|ZP_04382884.1| inner-membrane translocator [Rhodococcus erythropolis SK121]
 gi|229324522|gb|EEN90277.1| inner-membrane translocator [Rhodococcus erythropolis SK121]
          Length = 362

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 68/327 (20%), Positives = 135/327 (41%), Gaps = 22/327 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  V+    +   L  ++S  +       + I  +   GL+IV G  GLLS+     + 
Sbjct: 32  ILQLVLLVAAVCALLLVSQSAPFRVGQFTSVFIIAIAIAGLNIVSGYTGLLSIGHSAFFG 91

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY+  +L    G S    IP++ ++    G+++GLPSL+ +G YLA+ TL ++  F  
Sbjct: 92  LGAYTTGVLIVDRGYSPLTTIPMAVVLCFVLGLLVGLPSLRIKGLYLALVTLAVAVAFPE 151

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           ++ K   +T G AG+ V   L                  +     +++++V      +  
Sbjct: 152 VIRKTGDLTGGAAGMVVRANLLVPPKWTG---------LTRADTYLWIFWVSAVTLAVVM 202

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +I  L ++    A   +RDN+ A  +    +   K+ AF +S A  G+AG+ F      
Sbjct: 203 LLIRNLVKSRFGLAMVAVRDNEIAASANGINVARVKILAFGLSGAITGLAGSLFTMYIGA 262

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +SP+ F   ++I  I+ ++LGG+ +          ++ +      +     +        
Sbjct: 263 LSPESFSLMKSIEFITGLVLGGIATQFGPIVGATAVVFLPYYTGSVTDGPVSG------- 315

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                  +    L  ++ +    ++  
Sbjct: 316 ------VVFGAVLIAIVFLMPDGIVGR 336


>gi|254471085|ref|ZP_05084488.1| inner-membrane translocator [Pseudovibrio sp. JE062]
 gi|211960227|gb|EEA95424.1| inner-membrane translocator [Pseudovibrio sp. JE062]
          Length = 384

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 58/341 (17%), Positives = 120/341 (35%), Gaps = 15/341 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +  +    +L + L           +  +  I+ +FA G +++ G  G LS       
Sbjct: 11  LLMFVLFAAAILTMPLWLAPIGAGYPDLLQKFAIFGLFALGFNLLFGLTGYLSFGHAAFL 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IG+Y+ V      G++    +  S + S    + +G  SL+  G Y +I TL  +++  
Sbjct: 71  GIGSYAAVWSFKLLGMNPLPALLFSVVFSSLFAVAIGYISLRRSGIYFSILTLAFAQMSY 130

Query: 135 NILIK-WKPITNGKAG-IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           N+      PITNG+ G   +            S            +     +Y    +  
Sbjct: 131 NLAYSVLTPITNGETGLRVLQSDPRLFDGASASSGPLISNLFGIEMTGYSGFYFCAVLLI 190

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +   I   + R+      R ++ NQ              L+AF +S  F G+AG+  A +
Sbjct: 191 IGFYISQRIFRSPFGMMLRAVKSNQNRMSYTGLNTRPYTLAAFVISGTFAGVAGSLLAVT 250

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
                 +  +++ +  V+ + ILGG  +L        ++     +    N    +++  F
Sbjct: 251 DPLAGAERMQWTASGEVVLMTILGGAGTLLGPILGAGLIKYFENIFSAYNEQTLHAIFSF 310

Query: 313 DCSF-------------NMRHTTLMVIALFLVILMRSHSLL 340
              F                    + +   ++++     ++
Sbjct: 311 LPDFMEGPVVSIASLFVGEGWHLTLGLLFMVIVIFLPGGIM 351


>gi|86749173|ref|YP_485669.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86572201|gb|ABD06758.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 549

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 63/334 (18%), Positives = 131/334 (39%), Gaps = 30/334 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              I  +LA+    ++ LF+  +     + S      IY        +VVG+ G+ SL  
Sbjct: 100 KRPIWWMLALAAFFIMPLFVPGSMWNT-VMSAASVFAIYAAINLCWMLVVGTAGIFSLAT 158

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                  AY    +    GL  W+L     +I  A G+++ LP+++  G Y A+ TL + 
Sbjct: 159 YAVVGAAAYGTTYMAITLGLPWWVLPFAGMLIGLAFGVLIALPAMRLDGFYYALLTLGVV 218

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           E+ +  +++ +   +   G+Y A                     S     +  YYV L +
Sbjct: 219 ELCRVYVVQSRQFGSATGGLYGAPSYLPAW-------------LSQSNRLLLGYYVALFV 265

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN-TTIIFAKLSAFAVSSAFIGMAGAFF 249
             L+ ++  ++    +    R  ++ ++ F        I A++  F +SSA +G  G F+
Sbjct: 266 MILALALYRFVDGKRLGRLLRMAQEKKEGFAQACGVDFIRARIMVFLISSAALGFIGGFY 325

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A      SP++F F   ++ ++++++GG+         T I++ +  +   +        
Sbjct: 326 AVHFGGASPNLFSFDTLLLSLAMLVIGGIGRAEGAVAGTLIVVFIDRVLIDLGP------ 379

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                        L+   +  V+L     +  ++
Sbjct: 380 ---------LRFVLIGAIMLGVVLFLRGGIFGIK 404


>gi|311695596|gb|ADP98469.1| inner-membrane translocator [marine bacterium HP15]
          Length = 335

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 70/323 (21%), Positives = 130/323 (40%), Gaps = 17/323 (5%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V   L+ + L A     +   +  Q+ I      GL+++VG  G +SL     + +GAY
Sbjct: 13  LVILALILVILPAFLGNPFHYELVTQMAIIAATVVGLNLLVGFAGQISLGHAGFFGLGAY 72

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              I    YG S    + V A++ GA   I+G P L+ +G YL++ATL +  I   IL  
Sbjct: 73  FTGIATGTYGWSSVPALVVGAIVVGAIAWIVGRPILRLKGHYLSMATLAVGFIIAIILNN 132

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
            + +T G  G+ V    + +     S    +      +      Y     +  ++    L
Sbjct: 133 ERALTGGPDGMPV--PAFEIFGWELSAFGRYSLFGITIEGFQAWYIFASVVLLVAVWFAL 190

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  + I  A R++  ++ A   +       K   F +S+ +  + G+ +A  +  I+P 
Sbjct: 191 NLIESPIGRALRSVHGSEVAASVVGVNTAKYKSLVFVISAIYASLMGSLYAHFQGFITPA 250

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  F  +I+ I++V+LGGM S   +     +L  + ++                      
Sbjct: 251 VASFEFSILFITMVVLGGMGSTFGVILGAVVLKLLPQVLADFQE---------------L 295

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
              +  + L L ++     LL  
Sbjct: 296 EHVMFGLILMLTMIFMPKGLLPT 318


>gi|306823418|ref|ZP_07456793.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Bifidobacterium dentium
           ATCC 27679]
 gi|304553125|gb|EFM41037.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Bifidobacterium dentium
           ATCC 27679]
          Length = 365

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 77/351 (21%), Positives = 141/351 (40%), Gaps = 42/351 (11%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           L + +   +  +   V   LL        +  Y+  + +   I V+    L++ +G LG 
Sbjct: 8   LSIKQSYLVCAIGVAVLFGLLMAVCETGVASLYVKGIIMTCCIAVIMTTSLNLTIGVLGQ 67

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLS---------IWLLIPVSAMISGACGMIMGLPSLK 116
           L+L C    AIGAYS  +L      +           L+     +++   G+++G+P+L+
Sbjct: 68  LTLGCCGFEAIGAYSAALLSKLLVANGVQMDATLRFLLVTFAGGVVACIFGILVGIPALR 127

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
             GDYLAI TL   EI + I+   K                      + L    +  +  
Sbjct: 128 LHGDYLAIITLGFGEIIRVIIQNLKVAGG------------------KGLSEGQQGQALI 169

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
            I  +   YV+  +  ++  ++    R+    A + IRD++ A  +    I + K+  FA
Sbjct: 170 GIDRLANLYVVFWITVVTVVLLFMFARSRYGRAVKAIRDDEIAAGASGINITYLKVMVFA 229

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           +S+ F G+AG  FA     ++P M  + ++I  + +V+ GGM SL+    A   L  + E
Sbjct: 230 ISAFFAGIAGGIFAQYIGALTPSMAGWLQSINYVIMVVFGGMGSLTGSIVAAVGLTILPE 289

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
           L    + Y                  +  + L L+++ R   +      S 
Sbjct: 290 LLRAFSEY---------------RMLVYSVVLVLIMVFRPQGIFGNWEFSL 325


>gi|88798003|ref|ZP_01113590.1| Branched-chain amino acid ABC-type transport system, permease
           component [Reinekea sp. MED297]
 gi|88779200|gb|EAR10388.1| Branched-chain amino acid ABC-type transport system, permease
           component [Reinekea sp. MED297]
          Length = 537

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 98/297 (32%), Gaps = 21/297 (7%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            + GL+I  G +G++++       +GAY+  ++       I   + V+   +       G
Sbjct: 262 ASIGLAITFGVMGVINMAHGEMIMLGAYTTYVVQLLMPNHIDASLWVAIPAAFLVSGAFG 321

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           +   +    +L    L      + +L  +      +  +              S +    
Sbjct: 322 VLIERGVIQFLHGRPL------ETLLATFGISLILQQLVRTIFSPLNRQVDTPSWMSGQF 375

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
             +  +   +  +Y+ +    + A+++L L +T +    R +  N++   ++        
Sbjct: 376 EINPVLFVTLNRFYIFVFALLVFAALVLVLSKTNLGLHVRAVSQNRQMAKAMGIRTARVD 435

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   +   +         S  I    +V+ GG+ +L     A   L
Sbjct: 436 ALTFGLGSGIAGIAGVALSQLTNV--GPNLGQSYIIDSFMVVVFGGVGNLFGTLVAAFTL 493

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               ++   +      S              L+++ + L I  R   L   +  +  
Sbjct: 494 GIANKVFEPVTGAVLAS-------------ILVLVFIILFIQKRPKGLFPQKGRAAE 537


>gi|39934636|ref|NP_946912.1| branched chain amino acid ABC transporter ATP-binding protein
           [Rhodopseudomonas palustris CGA009]
 gi|39648485|emb|CAE27007.1| possible branched-chain amino acid transport system ATP-binding
           protein [Rhodopseudomonas palustris CGA009]
          Length = 621

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 56/307 (18%), Positives = 116/307 (37%), Gaps = 24/307 (7%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL-SIWLLI 96
           +   +  ++L + +   G  I+ G  GLLS      Y +G +    L     + S+WL +
Sbjct: 29  FSTDLLTRVLNWGLIGLGFDILFGLTGLLSFGQAAFYGVGGFVTAYLLVSGAVGSVWLAL 88

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK-WKPITNGKAGIYVADR 155
            V    +G  G+++G  +++  G Y  + TL   ++   I        T G+ GI     
Sbjct: 89  LVGTASAGVFGLVVGWFAVRRIGIYFTMITLAFGQMAYFIENSPLSDYTGGENGIPGVPA 148

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                         F   +  +   + MY +   + FL   +   + R+ +      I++
Sbjct: 149 PTLG----------FGADAFRISAGLPMYVLFAVIFFLGYVLARRIVRSPVGAILLAIKE 198

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N      L   +   KL+AF +++ + G+AG    + +  + PD F    +  ++   I+
Sbjct: 199 NTGRVAMLGHDVPAYKLTAFVIAALYAGLAGGLLGSFQSYMPPDAFSLETSGQLVVQTIV 258

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  +L       A+            + +    L+    F M    ++ IA  ++++  
Sbjct: 259 GGAGTLIGPLVGAAV------------WLWLRDNLQLIPGFAMLWKLVLGIAFIVLVIGL 306

Query: 336 SHSLLRL 342
              +   
Sbjct: 307 RRGVCGE 313


>gi|91783056|ref|YP_558262.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91687010|gb|ABE30210.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 325

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 74/320 (23%), Positives = 135/320 (42%), Gaps = 30/320 (9%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
             ++   L A  S  Y   +   I I+ + A GL+I+ G  G  SL     +AIGAY+  
Sbjct: 27  GFVILYALIALFSGGYFVYLLNLIGIFALVAIGLTILTGFSGQTSLGHAGFFAIGAYASA 86

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           I   R+G+  WL IP++   +   G ++ LP+L+ +  YLAIATL    + Q ++ +W+ 
Sbjct: 87  IFAQRWGVPFWLAIPLAGAFATVIGALIALPALRLKDLYLAIATLGFGIVTQKVIFEWRT 146

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+ V     F  +                       +V+             L 
Sbjct: 147 VTGGGGGMQVPMPSLFGMSVADGSRM---------------AWVIAATLAAGTWAAFRLA 191

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            +    A   +R+++ A   +   +   K+ AFA+S+ +  +AG  +A     ++P+ F 
Sbjct: 192 SSRTGRALSMLRESETAAACIGIRVARYKVVAFALSAFYTAVAGGLYANVVRYVNPESFD 251

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + +I+ ++++++GGM S+       A  + V E   G                      
Sbjct: 252 VNMSIMFLAMIVIGGMGSVRGALLGAAFYVAVPEAFRGFKDAPG---------------L 296

Query: 323 LMVIALFLVILMRSHSLLRL 342
           +  I+L LV+++    L  L
Sbjct: 297 IFGISLMLVVILLPGGLTSL 316


>gi|199599625|ref|ZP_03213005.1| Predicted amino acid ABC-type transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|229553344|ref|ZP_04442069.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus rhamnosus
           LMS2-1]
 gi|258507310|ref|YP_003170061.1| branched-chain amino acid ABC transporter permease [Lactobacillus
           rhamnosus GG]
 gi|258538492|ref|YP_003172991.1| branched-chain amino acid ABC transporter permease [Lactobacillus
           rhamnosus Lc 705]
 gi|199589480|gb|EDY97606.1| Predicted amino acid ABC-type transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|229313225|gb|EEN79198.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus rhamnosus
           LMS2-1]
 gi|257147237|emb|CAR86210.1| ABC transporter, branched-chain amino acid transporter permease
           protein [Lactobacillus rhamnosus GG]
 gi|257150168|emb|CAR89140.1| ABC transporter, branched-chain amino acid transporter permease
           protein [Lactobacillus rhamnosus Lc 705]
 gi|259648667|dbj|BAI40829.1| branched-chain amino acid ABC transporter permease component
           [Lactobacillus rhamnosus GG]
          Length = 316

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 78/344 (22%), Positives = 144/344 (41%), Gaps = 43/344 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   I   + V   +L+ +         +I++  + I I ++ A GL++++G  G  SL 
Sbjct: 6   RSKLIWLAIMVAGFVLIDIGEFTGIVNSFIENALVTIGINIILAVGLNLIIGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+          +L + +  +I+    +I+G+P+L+ RGDYLAIAT+
Sbjct: 66  HAGFMAIGAYATAIVTQNMATPLGFYLAMLLGMVIAVIAALIVGIPTLRLRGDYLAIATM 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +EI + I+     ITNG AG++    L    T                         +
Sbjct: 126 GAAEIIRVIINNL-KITNGPAGMFNIPPLASWPT-------------------------V 159

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  ++  +I+    +    A   IRD+  A  S+       KL+AF + +A   + G+
Sbjct: 160 YVLMCVTTVVIVNFVHSRSGRAIMAIRDDDIAAESIGINPTKWKLAAFVLGAATAAIGGS 219

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A+    I+P  F    +I ++ IV+LGG+ S++    A  +L  +  +          
Sbjct: 220 LHASYLQTIAPGDFGIMNSISLLIIVVLGGVGSMTGTFVAAIVLGVIDTVLQNF------ 273

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                          +  +AL L+++ +   LL     S   +R
Sbjct: 274 ---------GTLRMVIYALALILLMVFKPSGLLGHYELSFSRKR 308


>gi|91774512|ref|YP_544268.1| inner-membrane translocator [Methylobacillus flagellatus KT]
 gi|91708499|gb|ABE48427.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Methylobacillus flagellatus KT]
          Length = 545

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 57/338 (16%), Positives = 128/338 (37%), Gaps = 31/338 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L++      L  +   +   L  G  +S   + + G    IY       ++V+G+ G+ S
Sbjct: 94  LDRRPVYWMLSFIAMVIAPLLMPGGLES--TLLNAGAVFFIYAAINLCWTLVIGTAGIFS 151

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L  +     GAY    L   YGL  W L  V ++I    G+++ LP+ +  G Y A+ TL
Sbjct: 152 LASMAIVGAGAYGAAYLSLTYGLPWWSLPMVGSVIGLVFGILIALPATRLEGFYYALLTL 211

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            + E+ +  +I+ +   +   G+Y                 +     S +      YYV 
Sbjct: 212 GLVELCRVYVIQSRTFGSATGGVY-------------GADSYLPDGISEISGLTISYYVC 258

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA-KLSAFAVSSAFIGMAG 246
             +      +  +++   +    R   + ++AF           ++  F ++S  +G  G
Sbjct: 259 FAVMLAVLFMFRFIQGKRLGRILRMAPEKREAFAEATGVNFRWARIQVFIITSVVLGALG 318

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             +A+     SP +F     ++ ++++++GG+         T +++ + ++         
Sbjct: 319 GVYASHFHGASPSLFSMDSVLLGLAMLVIGGIGRSEGAVFGTLVVVMIDKVF-------- 370

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                    +      L+ + +  V+L     +  ++ 
Sbjct: 371 -------IDWGPLRLILIGVIMLSVVLFLKGGVFGIKQ 401


>gi|289582735|ref|YP_003481201.1| inner-membrane translocator [Natrialba magadii ATCC 43099]
 gi|289532288|gb|ADD06639.1| inner-membrane translocator [Natrialba magadii ATCC 43099]
          Length = 504

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 72/393 (18%), Positives = 140/393 (35%), Gaps = 55/393 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGAT-KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           K   ++  + +VY L+  +   +       +  M   I +Y M    L++  G  GL ++
Sbjct: 23  KIIAVIGAIYIVYALIGLILGYSLDGIINTLRRMTYLIAVYGMVTLALNLHWGYTGLFNI 82

Query: 69  NCVIAYAIGAYSYVILGSRYGL-----------SIWLLIPVSAMISGACGMIMGLPSLKF 117
                 AIG Y  ++L                  + + I    + +G  G+++ LP+L+ 
Sbjct: 83  GVAGFMAIGLYVTMMLAKPVDPGGAAQYSGLGLPMPIAIIGGVVAAGLAGLVVALPALRL 142

Query: 118 RGDYLAIATLIMSEIFQ----NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
           R DY AI T+  +EI +    +  ++   I   + G      L        ++I      
Sbjct: 143 RADYFAITTIAFAEIVRLGVTSDALQQFTILGAELGTGGGRGLIRNYDDPMNVIFQLEIF 202

Query: 174 SSFVIYEIFMY-------------YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
           SSFV     ++              VL+ +      +I    R+      + IR++++A 
Sbjct: 203 SSFVNLTNSLFGFGPTQARALAYSIVLVIVLAGIYWLIQRTSRSPFGRVLKAIREDEEAA 262

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            SL       K+  F +  A +G+AG  +   R  ++P+ F+      +   +I+GG  S
Sbjct: 263 QSLGKNTNMFKIKVFVLGCALMGLAGILWRFRRTGVTPEAFRPHVTFYIWIALIIGGAGS 322

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFD--------------------------C 314
            +     + + + V+           + L+                              
Sbjct: 323 NTGSILGSGLFVAVLFEGPQYLRRVIDQLVAVGDAPNTFAGAVGPLLSANPVPLVRYTFA 382

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
            F      +M +AL L++  R   LL  R  + 
Sbjct: 383 EFLTLQFVIMGVALILLMQRRPDGLLGHREETA 415


>gi|118589786|ref|ZP_01547191.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Stappia aggregata IAM 12614]
 gi|118437872|gb|EAV44508.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Stappia aggregata IAM 12614]
          Length = 328

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 69/315 (21%), Positives = 128/315 (40%), Gaps = 19/315 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------Y 88
            Y   M I I IY + A GL+I  G  GL +      +A+GAY+  IL +         +
Sbjct: 8   NYALFMAIFIGIYALLALGLNIQWGFAGLFNAGIAGFFAVGAYTSAILTTEHADGRIGGF 67

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            +  ++    + + +      +G   L+FR DYLAIA++ ++EI + ++     +TNG  
Sbjct: 68  DMPFFVGWIGAMIAAALVAWPIGKICLRFRSDYLAIASIGIAEIIRLVVKSEAVLTNGAR 127

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           GI    R         +        ++++  +     +++ +   +  ++          
Sbjct: 128 GISGIPRPA-------AEFPSMAQETAYLASQAAYLAIVVVVLVAAYLLVERQFNAPWGR 180

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE-NI 267
             R IRDN+ A  ++   + F +L AF   SA +G+ GA FA     I+P+         
Sbjct: 181 MMRAIRDNEGAAKAMGKDVEFRRLQAFIFGSALMGLGGALFAHFNRSITPEAIDPMVATF 240

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +V  ++ILGG  +        A++  +  +             ++          L+ + 
Sbjct: 241 LVWIMLILGGSGNNRGAILGAAVVWIIWSMSEIATD---RLPTEYAIQAKYIRLFLIGLM 297

Query: 328 LFLVILMRSHSLLRL 342
           L LV+  R   LL  
Sbjct: 298 LQLVLRFRPEGLLPE 312


>gi|121609675|ref|YP_997482.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121554315|gb|ABM58464.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 358

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 82/354 (23%), Positives = 151/354 (42%), Gaps = 23/354 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +R ++      +   +  ++ F+ +    S  +  ++ I  L++ + A GL+I+ G
Sbjct: 18  QIFPIRQDR------IGMALLLVVAFVGIPLLGSAYWFSAILIPFLVFALAALGLNILTG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW-LLIPVSAMISGACGMIMGLPSLKFRGD 120
             G LSL      A+GAY+      R       L   ++   +   GM+ GLPSL+ +G 
Sbjct: 72  YAGQLSLGSAAFMAVGAYAAYNFQLRIEGIPILLSFILAGACAALVGMVFGLPSLRIKGF 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL        +L K+   +N  +   ++ +                     +   
Sbjct: 132 YLAVATLAAQFFVVWVLTKFPWFSNHSSSGVISAQKVVFLGM-------------DINSP 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y  +LG+  + A +   L R++   AW  +RD   A   +   ++ AKL AFAVSS 
Sbjct: 179 VRKYLFVLGIVCVMALLAKNLVRSSTGRAWMAVRDMDVAAEVIGIQLMRAKLLAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           F G+AGA +A      + PD F    +  ++ ++I+GG+ S+      +A ++ +  L  
Sbjct: 239 FCGVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGAFLGSAFILLLPILLD 298

Query: 300 GMNFYY--FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            +      F  L   + + +     L    +   +++  H L RL   +    R
Sbjct: 299 NVLPPLATFLHLPFTNATVSHIQMMLFGGLIIFFLIVEPHGLARLWQITKEKLR 352


>gi|73537494|ref|YP_297861.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72120831|gb|AAZ63017.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 341

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 60/320 (18%), Positives = 127/320 (39%), Gaps = 28/320 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L L +         Y  ++     IY +   GL+++ G  G L+L      AIGAY+ 
Sbjct: 12  LLLALAIAFPQIAPNSYYLTVMTLAFIYAIATLGLNLITGYTGQLNLAHGGFMAIGAYTL 71

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            IL   + +  WL   +S ++    G  +GL SL+ +G Y +I T+ +  I   ++ KW+
Sbjct: 72  GILTVDHQVPFWLAFALSGVVCMVVGYFVGLVSLRLKGHYFSIFTMCIGYIIYLLIEKWE 131

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T+G  G+        +G      +                YY++L    +   ++  +
Sbjct: 132 SLTHGTVGLIGIPVPAAIGPVTFDSVP-------------AQYYLVLAFLAIGTFLMHRI 178

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             + +  ++  +R++     +L   ++  K+ +F +S  + G AGA +A     + PD+ 
Sbjct: 179 VTSLLGRSFMAVRNSDALAEALGINLMRTKVLSFVLSVGYAGFAGALYAGQVRFLGPDIA 238

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
           +      ++  +++GG  +L        ++  V +    +  Y                 
Sbjct: 239 RTDLTFDMVMAMLVGGTGTLFGPLLGAVLVPWVTQTLQFLQDY---------------RM 283

Query: 322 TLMVIALFLVILMRSHSLLR 341
            +    L L+I+     ++ 
Sbjct: 284 LVFGPVLILLIIFFPDGIVG 303


>gi|163745501|ref|ZP_02152861.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Oceanibulbus indolifex HEL-45]
 gi|161382319|gb|EDQ06728.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Oceanibulbus indolifex HEL-45]
          Length = 358

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 78/344 (22%), Positives = 148/344 (43%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ ++Y   + L   ++ +          +  +++S+ +  LIY + A GL+I+VG  
Sbjct: 20  FPIKFDRYRYYVVLFVAIFVI------PFLVNDYWVNSLFLPFLIYAIAAIGLNILVGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +   +S+++ I ++ +I+ A G + GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYASYKLMTAMPDVSMFIHILLAGLITAAVGALFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N  A   ++               F    +        
Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYSASGQISAP---------ERDTFGILITGPNTEAWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L     SA +   L R ++   W  IRD   A   +    + AKL+AFAVSS FI
Sbjct: 185 TYMFCLIFTVFSALVARNLTRGSVGRKWMAIRDMDIAAEIIGVNPLRAKLTAFAVSSFFI 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F +         + F   ++ +V+ ++I+GG+ S+       A L+ +  L   
Sbjct: 245 GISGALFFSIYLGAVEVGEAFGIQKSFLVLFMIIIGGLGSIFGSFAGAAFLVLLPVLLKI 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +   +                 ++   + + ++   H L +L  
Sbjct: 305 VGVDWLGWPTDI---VAHLQLVIVGGLIIIFLIAEPHGLAQLWR 345


>gi|71083361|ref|YP_266080.1| branched chain amino acid ABC transporter [Candidatus Pelagibacter
           ubique HTCC1062]
 gi|71062474|gb|AAZ21477.1| Branched-chain amino acid transport protein [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 336

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 75/327 (22%), Positives = 139/327 (42%), Gaps = 23/327 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   ++L   L       +   + I I ++ + A   +++ G  G +SL     + 
Sbjct: 19  IISLISSLIVLLFALPHFGLNSFYLHLMIMIFMHAVMAQSWNVIAGFSGQISLGHGAFFG 78

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY+   L  +YG+S W+ I +  ++SG   +++G+P L+  G Y AIATL++   FQ 
Sbjct: 79  IGAYATSFLYVQYGISPWISIFLGMIVSGVAAVLIGIPMLRLSGHYFAIATLLIGISFQV 138

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I  +W+ +                   V            F   ++  YY+ L    ++ 
Sbjct: 139 IFQRWEWVGAASG------------VWVPMTSGDSLLALQFHSSKMPYYYIFLVFFIITF 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++  L R+ +    R +RD+ +A  SL   +   K+ A+ +S+  +   G+ FA     
Sbjct: 187 FLVWLLSRSKLGYRLRAVRDDPQAALSLCINVSNYKIIAYVISAMIMAPMGSLFAQYILI 246

Query: 256 ISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           I PD +F    +IIV+ I +LGG+ ++       AILI + E           ++     
Sbjct: 247 IDPDRVFNIEISIIVLLITVLGGIGNVWGPIVGAAILIPISEYSRIYLGGTGGAV----- 301

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   L  + L L+ + R   L+ 
Sbjct: 302 -----DLILYGLILMLICIFRPEGLIS 323


>gi|332286184|ref|YP_004418095.1| putative branched-chain amino acid transport permease [Pusillimonas
           sp. T7-7]
 gi|330430137|gb|AEC21471.1| putative branched-chain amino acid transport permease [Pusillimonas
           sp. T7-7]
          Length = 337

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/330 (15%), Positives = 118/330 (35%), Gaps = 30/330 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
              +    ++  L L      + +  ++ ++  +ILI+ + A  L++++G  GL+S    
Sbjct: 13  ASFVVNAVLLIALALVPLYARSMADPFVVTLITRILIFAIAALSLNLILGYGGLVSFGHA 72

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           +   +G Y   I       + WL +  +  + G  G++ G  +L+  G    + TL  ++
Sbjct: 73  LYLGLGVYCAAIPSFHGMDNGWLQLLATLAVCGMVGLLTGSIALRTSGISFIMITLAFAQ 132

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +F  + +                           L     F    +     +Y+V   + 
Sbjct: 133 MFYFLFVSLSQYGG---------------DDGLRLASGSNFSGIVLTDPRTLYFVAFLVL 177

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            LS      L  +      R  + N++   +L       +L+ + VS+   G+AG  +  
Sbjct: 178 CLSLYACHRLVHSRFGIVIRASKSNEQRMKALGYPTYRYRLAVYVVSAILCGIAGLLYGN 237

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                SP    ++ +  +I +V+LGG+ +L         +I   E    +  ++      
Sbjct: 238 LTQFGSPSYMSWTTSGELIVMVMLGGIGTLFGPLLGALAMILTEEGLKALTEHW------ 291

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                      +    + ++I++    +  
Sbjct: 292 ---------MAIFGPLIVIIIIVSRLGIAG 312


>gi|83855168|ref|ZP_00948698.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83843011|gb|EAP82178.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
          Length = 358

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 77/344 (22%), Positives = 145/344 (42%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ ++Y   L L       +    +    +  +++S+ +  LIY + A GL+I+VG  
Sbjct: 20  FPIKFDRYRYYLVL------FIAVAVIPFVINDYWVNSLFLPFLIYAIAAIGLNILVGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+    + +   +S+ + + +S +++   G++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKFMTAFPDVSMLVHVLLSGLVTAGVGVLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N  A   ++           +      +          
Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYSASGQISAPERTFFGIEITGPNTQAW---------A 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L     SA +   L R ++   W  IRD   A   +    + AKL+AFAVSS FI
Sbjct: 185 TYLFCLMFVIFSAYVARNLTRGSVGRKWMAIRDMDIAAEIIGVNPLRAKLTAFAVSSFFI 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F A         + F   ++ +V+ ++I+GG+ S+       A L+ +      
Sbjct: 245 GISGALFFAVYLGAVEVGEAFGIQKSFLVLFMIIIGGLGSIFGSFAGAAFLVLLPVALKI 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +   +F                ++   + + ++   H L +L  
Sbjct: 305 VGVDWFGWPTDI---VAHLQLVIVGGLIIIFLIAEPHGLAQLWR 345


>gi|226946375|ref|YP_002801448.1| amino acid ABC transporter-like protein [Azotobacter vinelandii DJ]
 gi|226721302|gb|ACO80473.1| amino acid ABC transporter-like protein [Azotobacter vinelandii DJ]
          Length = 355

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 66/337 (19%), Positives = 128/337 (37%), Gaps = 16/337 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L   +  +  F  +    +  +  ++ I  L+  +   GL+++ G  G LSL      A+
Sbjct: 27  LGLALLLVFAFAVVPWLGNDYWFGAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAV 86

Query: 77  GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GA++         GL +   + +  +++    ++ GLPSL+ +G YL ++TL        
Sbjct: 87  GAFAAYNFELRVPGLPLPASLLLGGLVAALVALLFGLPSLRIKGFYLIVSTLAAQFFVPW 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L ++   +N  A   ++                              Y + LG+     
Sbjct: 147 ALTRFGWFSNYDASGVISAPKLE-------------IFGIDFGTPAGRYLLTLGVVTALF 193

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254
            +   L R+ +   W  +RD   A   +   ++  KL AFA+S  F+G+AG+ +A A   
Sbjct: 194 WLGHNLVRSELGRNWMAVRDMDTAAAVIGIPLLKTKLLAFAISGFFLGVAGSLWAFAYLG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            + P  F  + +  V+ IVI+GG+ S+       A ++    L   +       L+    
Sbjct: 254 TVEPHGFDLNRSFQVLFIVIIGGLGSILGNFLGAAFMVLFPLLLSNLAGLLPGGLIDAG- 312

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                   +    + + ++     L RL        R
Sbjct: 313 QLENLQKIVFGALIVVFLIKEPEGLARLWQRLRERAR 349


>gi|283455534|ref|YP_003360098.1| branched-chain amino acid transporter permease [Bifidobacterium
           dentium Bd1]
 gi|283102168|gb|ADB09274.1| Branched-chain amino acid transport system permease protein
           [Bifidobacterium dentium Bd1]
          Length = 359

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 77/351 (21%), Positives = 141/351 (40%), Gaps = 42/351 (11%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           L + +   +  +   V   LL        +  Y+  + +   I V+    L++ +G LG 
Sbjct: 2   LSIKQSYLVCAIGVAVLFGLLMAVCETGVASLYVKGIIMTCCIAVIMTTSLNLTIGVLGQ 61

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLS---------IWLLIPVSAMISGACGMIMGLPSLK 116
           L+L C    AIGAYS  +L      +           L+     +++   G+++G+P+L+
Sbjct: 62  LTLGCCGFEAIGAYSAALLSKLLVANGVQMDATLRFLLVTFAGGVVACIFGILVGIPALR 121

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
             GDYLAI TL   EI + I+   K                      + L    +  +  
Sbjct: 122 LHGDYLAIITLGFGEIIRVIIQNLKVAGG------------------KGLSEGQQGQALI 163

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
            I  +   YV+  +  ++  ++    R+    A + IRD++ A  +    I + K+  FA
Sbjct: 164 GIDRLANLYVVFWITVVTVVLLFMFARSRYGRAVKAIRDDEIAAGASGINITYLKVMVFA 223

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           +S+ F G+AG  FA     ++P M  + ++I  + +V+ GGM SL+    A   L  + E
Sbjct: 224 ISAFFAGIAGGIFAQYIGALTPSMAGWLQSINYVIMVVFGGMGSLTGSIVAAVGLTILPE 283

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
           L    + Y                  +  + L L+++ R   +      S 
Sbjct: 284 LLRAFSEY---------------RMLVYSVVLVLIMVFRPQGIFGNWEFSL 319


>gi|297565971|ref|YP_003684943.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
 gi|296850420|gb|ADH63435.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
          Length = 358

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 66/304 (21%), Positives = 121/304 (39%), Gaps = 21/304 (6%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           +   I IY +   GL+I  G  GL+S+       +GAY+  +      L  WL +P+  +
Sbjct: 52  VLNFIFIYAIAVLGLNITTGYAGLISVGQAAFVGVGAYTAALTA--PYLPFWLTVPMGGL 109

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           ++   G I+GLPSL+ +  YLA+ATL   EIF   + +   +  G A             
Sbjct: 110 VAAGIGWIVGLPSLRVKHLYLALATLAFQEIFVWSVGRMPALAQGAAIPVEMRNFLGYEI 169

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
             R+   F+             YYV+L +  L       L R     A   +RDN +A  
Sbjct: 170 NFRNHNFFW-------------YYVILLVLVLMVIAWRNLLRGKYGRALIAVRDNDRAAD 216

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           ++       KL AFA+ + + G+AG   A  +  +  + F  ++++  +++ I+GG+ ++
Sbjct: 217 AMGMDPGRTKLLAFALGAFYGGIAGGLLAYFQRAVVIEEFTLAKSVTFLAMAIVGGLGTV 276

Query: 282 SKIAKATAILIGVVELCCGM------NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
                  A +  +      +      N      +       +        + + L ++  
Sbjct: 277 VGSLLGPAFIEYLRLWMERLSEAIKHNPSVQQVIPAGVDLASALLPLAFGLVIVLFLIFE 336

Query: 336 SHSL 339
              L
Sbjct: 337 PRGL 340


>gi|157151236|ref|YP_001450905.1| branched-chain amino acid permease protein [Streptococcus gordonii
           str. Challis substr. CH1]
 gi|157076030|gb|ABV10713.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus gordonii str. Challis substr. CH1]
          Length = 317

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 78/340 (22%), Positives = 141/340 (41%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + +   L +   +L+ +  G      +   +  +I I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNLLWLALILAGFVLITVLAGGGILNAFHLQILEEIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G+      + +  + + A I+G   + +G+P+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYAVAIIGTKSPTYPAFFAAMILGAFIAGLVALGVGIPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + +++    +TNG AGI                                    +
Sbjct: 126 GVSEIIRILIVNGGEVTNGAAGILSIPGFTSWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++    L   R+ +     ++R+++ A  S+      AK+ AF   +    +AGA
Sbjct: 161 YFFAVITTLFTLNFLRSPLGRKTLSVREDEIAAESVGVNTTKAKVVAFVFGAVTASIAGA 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F+  I V+ IV+ GG+ S++    A  +L  +  L          
Sbjct: 221 LKAGFIGAVVPKDYSFTNTINVLIIVVFGGLGSMTGTIIAAIVLGVLNMLLQ-------- 272

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                   F+     +  +AL LV++ R   LL       
Sbjct: 273 -------EFSSIRMIIYSLALILVMIFRPGGLLGTWELQL 305


>gi|295397178|ref|ZP_06807281.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Aerococcus viridans ATCC
           11563]
 gi|294974567|gb|EFG50291.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Aerococcus viridans ATCC
           11563]
          Length = 328

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 75/336 (22%), Positives = 133/336 (39%), Gaps = 43/336 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             K       + +    L+           +  ++ + I I ++ A GL++VVG  G  S
Sbjct: 12  FTKSTITWICVILGLFFLIMAAYLMGLVTSFYQNIMVTIGINMILAVGLNLVVGYAGQFS 71

Query: 68  LNCVIAYAIGAYSYVILGSR--YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           L      AIGAY   IL ++    +  +  +   A+++    +I+G+P+L+ +GDYLAIA
Sbjct: 72  LGHAGFMAIGAYVGAILSTQIPGPIGFYAGMAAGAVLAAIVALIVGVPTLRLKGDYLAIA 131

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL  SEI + I+     ITNG AGI                                 + 
Sbjct: 132 TLGASEIIRVIIQNL-KITNGAAGISGIPM-------------------------NVTWI 165

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            L     L+   I+    ++   A   +R+N+ A  S+       K+ AF + +    +A
Sbjct: 166 TLFIFIVLTTLFIVNYIHSSPGRATIAVRENEIAAESVGVKTTKYKIIAFVIGAVTASIA 225

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  +A     I+P  F F  +I V+ IV+ GG+ S++    A   L  +  +   +    
Sbjct: 226 GTLYAGYFSVINPSQFTFQRSIDVLIIVVFGGIGSVTGSFVAAIALGLLNSVLAPL---- 281

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                            +  IA+  +++ +   L+ 
Sbjct: 282 -----------GQLRMVVYGIAIIAIMVFKPSGLMG 306


>gi|225573612|ref|ZP_03782367.1| hypothetical protein RUMHYD_01806 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039030|gb|EEG49276.1| hypothetical protein RUMHYD_01806 [Blautia hydrogenotrophica DSM
           10507]
          Length = 354

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 77/337 (22%), Positives = 137/337 (40%), Gaps = 24/337 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  K + I   + +V  +++   +        +  + + +  YV+ A  L++VVG LG L
Sbjct: 7   KNTKQNLITYGIVIVAFVVVQCLIATGSISSLMQGLMVPLCTYVILAVSLNLVVGILGEL 66

Query: 67  SLNCVIAYAIGAYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           SL       +GA+S                   +L + V    +   G+++G+P L+ +G
Sbjct: 67  SLGHAGFMCVGAFSSAFFSMCTQDTITVASLRFFLALIVGVATAAVFGILIGIPVLRLKG 126

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           DYLAI TL   EI +N++       +     +    +  L       +            
Sbjct: 127 DYLAIVTLAFGEIIKNLVNVLYIGKDKNGFHFSMKDMMSLNMEPDGKVIVNGPQGITGAP 186

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
               + + + +  +S  IIL L  +    A   IRDN+ A  S+   I   KL AF VS+
Sbjct: 187 SDSTFLIGVILVLVSLFIILNLTDSRDGRAIMAIRDNRIAAESVGINITKYKLMAFTVSA 246

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSEN--IIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           A  G AG  +A +   ++     F  N  I+++  V+LGG+ ++     A  IL  + EL
Sbjct: 247 ALAGAAGVLYAHNLSSLTATTNNFGYNMSIMILVFVVLGGIGNIRGSMIAAVILTLLPEL 306

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
             G++ Y                  +  I L +++L 
Sbjct: 307 LRGLSDY---------------RMLIYAIVLIVMMLF 328


>gi|311107130|ref|YP_003979983.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310761819|gb|ADP17268.1| inner-membrane translocator 41 [Achromobacter xylosoxidans A8]
          Length = 345

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 72/322 (22%), Positives = 131/322 (40%), Gaps = 17/322 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A +  L   L +    +  Y   +   + I V  A GL+I+ G  GL+SL       +GA
Sbjct: 24  AWLVLLAASLVMFPFVADAYWLYLACLVAINVASATGLNILTGYTGLVSLGQAAFMGLGA 83

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L  R G  + L +    +++   G+++G+PSL+ +G YLAIAT+  S I   I  
Sbjct: 84  YTVAVLEQRLGTPVLLNLVAGGLVAMLGGLLVGIPSLRVKGLYLAIATIAASFIAHFIFA 143

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W+             R                     +     +Y++++ +  L     
Sbjct: 144 NWQFTGGTTGMQVPPAR----------------VLGVDLDTSFKIYWLIVPVTALMVLGA 187

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L RT I  A+  IRD   +   L   ++  KL +F +SS + G+AG  +A     ++P
Sbjct: 188 ANLFRTRIGRAFIAIRDRDISAEVLGIRLLRYKLLSFGLSSFYAGVAGGMWAYFFRVVTP 247

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F    +I  ++ +I+GGM ++         +  V EL   +   +           + 
Sbjct: 248 ESFPLIMSIFFLAAIIVGGMGTILGSILGAIFMTMVPELLK-LIVGWLPVGGDALRLISP 306

Query: 319 RHTTLMVIALFLVILMRSHSLL 340
             T +  + +   ++   H L 
Sbjct: 307 VRTIVFGLLIVGFLIFEPHGLA 328


>gi|154245652|ref|YP_001416610.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154159737|gb|ABS66953.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 348

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 62/324 (19%), Positives = 131/324 (40%), Gaps = 19/324 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A+         L    +  ++    I +L +   A   + + G +G LSL   +   +G
Sbjct: 26  IALAVLSGAAALLPLVTADSFLIHSAIMVLFFAYMATSWNFLCGYVGQLSLGHAMFSGVG 85

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y  V+L + YG+S W+ + V  +++ A  +++G P+ + +G Y A+ T+  +EI +  +
Sbjct: 86  GYVSVLLSTTYGVSPWIGMLVGGVVAAALSVLIGYPTFRLKGPYFALTTIAFAEIVRIWV 145

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                            R+      V   +    F +     +   YY++L M  L+   
Sbjct: 146 ENTDSFLG--------FRIKGAEGLVVPGVGGDSFWAFQFSGKTAYYYIILAMLALAILA 197

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            + + R+ +    + IR ++ A  +L  +      +AFA+S+    + G+F+A     I+
Sbjct: 198 TMVMERSKLGYCLKAIRGDRDAAEALGISPTRYTQAAFAISAFMTALGGSFYAQFFRYIN 257

Query: 258 PD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P+       +I +  + I+GG  +         +L+ + E+  G               F
Sbjct: 258 PERNMGLELSIDMALMSIIGGQGTPFGPLVGALLLMPLGEISRGY----------LGGQF 307

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
              H  +  + L + +L     L+
Sbjct: 308 LGLHLVIYGVVLMITVLYFPKGLI 331


>gi|114568058|ref|YP_755212.1| inner-membrane translocator [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114338993|gb|ABI69841.1| inner-membrane translocator [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 322

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 74/335 (22%), Positives = 134/335 (40%), Gaps = 41/335 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   I  L+      L+   + +    +Y       + I ++ A  L+++ G  G LSL 
Sbjct: 9   RSFLIEVLVLAGIFTLVQYLIISGLLNEYYQINLSSMCINIILAVSLNLINGFTGQLSLG 68

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+GAY+ V++ + Y     L +  + + +G  G+I+G+P+L+ +GDYLAIATL  
Sbjct: 69  HAGFMAVGAYAAVVVTTIYSQPFILGLLAACLAAGLAGLIIGVPTLRLKGDYLAIATLGF 128

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            EI + IL        G AGI    R                               L  
Sbjct: 129 GEIIRVILQN-IDFIGGPAGILGIPRYSTWP-------------------------WLFA 162

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  II+ L  ++   A  ++R+++ A   +       K+ AF + + F G+AGA +
Sbjct: 163 LTVFTIVIIVNLINSSYGRAIISVREDEVASELMGINTTNYKVLAFVIGALFAGLAGALY 222

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A     I P  F F ++  ++ +V+LGG+ S +    A   +  +               
Sbjct: 223 AHYFYIIKPSTFNFLKSFDILVMVVLGGLGSTTGAVIAAIFVTMLTAALQTF-------- 274

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                        L  + L +V++ R   L+  + 
Sbjct: 275 -------PAIRMVLYAVTLVVVMVYRPQGLMGNKE 302


>gi|319654208|ref|ZP_08008297.1| hypothetical protein HMPREF1013_04917 [Bacillus sp. 2_A_57_CT2]
 gi|317394142|gb|EFV74891.1| hypothetical protein HMPREF1013_04917 [Bacillus sp. 2_A_57_CT2]
          Length = 325

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 70/310 (22%), Positives = 130/310 (41%), Gaps = 19/310 (6%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y   +   ILI ++    + I + S G LSL       IGAY+  +L   + L I 
Sbjct: 5   LINPYYLQVASFILINIILGVSIYITL-STGQLSLANAGFMGIGAYTSALLTLNFDLPII 63

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + I    +++G  G+++G+P+L+ +G YLAI TL   E+ + I + W+ +T G  G+   
Sbjct: 64  VGILSGTLLAGLFGILIGIPTLRLQGVYLAIVTLGFGEVIRVIFVNWESMTKGAVGLSGI 123

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR---TAISNAW 210
             +            F          +     + L +  ++ SII + RR   + +  A+
Sbjct: 124 PHMGRELLNTLKEFGFDPKILGLQNNQFVFLAIFLILLGVTISIITFFRRQNRSRVGRAF 183

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I+ ++KA  S+   I + K+ AFA  +   G AGA FA     ISP  F +   + ++
Sbjct: 184 AAIKLDEKAAESMGINITYYKVLAFAQGALVAGFAGALFAHVLAYISPADFAYHRAVEIL 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
              + GG   +         L  + E+   ++ Y                  +  + + +
Sbjct: 244 IFAVFGGSEVIWGPVFGALFLTVMPEVLRFISEY---------------RYMIYGLIIII 288

Query: 331 VILMRSHSLL 340
           ++ +R   L+
Sbjct: 289 MMAVRPQGLI 298


>gi|182416034|ref|YP_001821100.1| urea ABC transporter, permease protein UrtC [Opitutus terrae
           PB90-1]
 gi|177843248|gb|ACB77500.1| urea ABC transporter, permease protein UrtC [Opitutus terrae
           PB90-1]
          Length = 418

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/345 (13%), Positives = 97/345 (28%), Gaps = 32/345 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L+A++  ++  L         +  ++  + L Y + A  + ++ G  GLLSL   + +
Sbjct: 57  IALVALLLIVVFPLLNAQGLISDFTLNLWAKYLCYALLAISVDLLWGYTGLLSLGQALFF 116

Query: 75  AIGAYSYVILGSR----------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           ++G Y   +   R                + +  + + S          +         +
Sbjct: 117 SLGGYMMGMYLMRMIGDLGQYRKPIPDFLVFLGWTELPSFWKPFDQFPFAAAMVLLLPGV 176

Query: 125 ATLIM--------SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
             L           +     ++           ++  D L                    
Sbjct: 177 VALGFGFLAFRARIKGVYFSILTQALTYGASLVLFRNDLLMGGNNGFTDYKFILGHDLRS 236

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
              +  +Y        L      WL RT      R IRD +             KL  F 
Sbjct: 237 AATQRALYVATAVALVLVFLGCRWLSRTKFGLVQRAIRDGENRVLFSGYAAGHFKLFVFV 296

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           V++    + GA +      I+P      +++  +  V +GG  +L         +  +  
Sbjct: 297 VAALIAAVGGALYVPQVGIINPSEMTPDKSLEAVVWVAVGGRGTLVGPVVGAITINALKS 356

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                             ++      L+     LV+L     ++ 
Sbjct: 357 WATR--------------AYPDLWLLLLGAMFILVVLFLPGGIVS 387


>gi|73539969|ref|YP_294489.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72117382|gb|AAZ59645.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 358

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 82/354 (23%), Positives = 145/354 (40%), Gaps = 23/354 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +R ++      +   V   + F  +    S+ +  ++ I  LI+ + A GL+I+ G
Sbjct: 18  QIFPIRQDR------IGFAVLMAVAFGVIPFVGSEYWFSAILIPFLIFSLAALGLNILTG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-WLLIPVSAMISGACGMIMGLPSLKFRGD 120
             G LSL      A+GAY+      R       L   ++ + +   G+  GLPSL+ +G 
Sbjct: 72  YAGQLSLGTAAFMAVGAYAAYNFQLRIEGMPVLLTFILAGLSAAVVGVAFGLPSLRIKGF 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL         L K+   +N  +   +               +        +   
Sbjct: 132 YLAVATLAAQFFVVWALTKFPWFSNNSSSGVI-------------TAQRLDLFGIAIDTP 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y  +L +  + A I   L R+A   AW ++RD   A   +   ++  KL AFAVSS 
Sbjct: 179 VKKYLFVLALVTVLAFIAKNLVRSATGRAWMSVRDMDVAAEVIGIPLMRTKLLAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           + G+AGA +A      + PD F    +  V+ ++I+GG+ S+       A ++ +     
Sbjct: 239 YCGVAGALYAFCYLGSVEPDGFSLDLSFRVLFMIIIGGVGSILGSFLGAAFILLLPIFLD 298

Query: 300 GMNFYYFNSLLKFDCSFNMRH--TTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            +     + L     +  + H    +    +   +++  H L RL   S    R
Sbjct: 299 NVLPPLASLLHLPFTNATVSHIQLMVFGGLIIFFLIVEPHGLARLWQISKEKLR 352


>gi|42524746|ref|NP_970126.1| branched-chain amino acid ABC transporter, permease protein
           [Bdellovibrio bacteriovorus HD100]
 gi|39576956|emb|CAE78185.1| branched-chain amino acid ABC transporter, permease protein
           [Bdellovibrio bacteriovorus HD100]
          Length = 323

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 69/342 (20%), Positives = 133/342 (38%), Gaps = 40/342 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
              +  L +           YI  + +   +  + +  L++V G  G  SL      AIG
Sbjct: 8   ALTLLCLAVLGLGLDFGVNAYIKLILLFATVNCLLSMSLNLVNGYTGQFSLGHAGFMAIG 67

Query: 78  AYSYVILGSRYGLSI--------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
           AY      +++G           ++ +  + + +   G ++GLPSL+ +GDYLAI TL  
Sbjct: 68  AYFSAYASTKWGFLPESLQLLQSFVFVIGAGLAAAVAGFLVGLPSLRLKGDYLAIVTLGF 127

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            EI +  L+    +  G  G+                               F +     
Sbjct: 128 GEIIRVALLNMDFL-GGPRGLSGIPSFGSFP---------------------FAFMFASV 165

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              +    I  +  ++    + ++R+++ A  ++       K+ AF +SS F G+AGA F
Sbjct: 166 WLVICFFTIWRVMHSSHGRGFLSVREDEIAAEAMGINTTRMKVKAFVLSSFFAGVAGALF 225

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A   + I+P  F F +++  + +V+LGGM S++    A  I+  + E    +        
Sbjct: 226 AHFTNFINPSSFTFLQSVNAVIMVVLGGMGSMTGSIVAAVIITVLPEALRPLQE------ 279

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                +       +  +AL L++++R   L      S+   +
Sbjct: 280 ----LTGVDLRMVIYSLALILMMILRPKGLFGDMEFSDVWRK 317


>gi|163857609|ref|YP_001631907.1| branched chain amino acid ABC transporter permease [Bordetella
           petrii DSM 12804]
 gi|163261337|emb|CAP43639.1| Branched-chain amino acid ABC transporter, permease protein
           [Bordetella petrii]
          Length = 335

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 18/286 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +   +     L       Y   +   I  Y +    L++VVG  GLLS+  V   AIGAY
Sbjct: 11  LAIGVAALATLPFWAGNPYQLHVATLIGTYWILIASLNLVVGYTGLLSIGHVGLLAIGAY 70

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           ++ IL   Y  S W+ +  +A++ GACG ++GLPSL+  G Y A+AT+  + +     + 
Sbjct: 71  TFAILTGAYDTSPWVAMAAAAVLCGACGFLLGLPSLRLPGFYFAMATMAFALMVTEFSLA 130

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +T G AG+ VA                             +Y+++  +  + + ++ 
Sbjct: 131 SDELTGGGAGLSVASFDAPFD------------------SPSGLYWLVAAVAGIVSWLVW 172

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L R +   A   +RD+     +    +   KL+ F  S    G+AGA FA+ +  I+P+
Sbjct: 173 NLARYSWGRAMIALRDSTVTAAATGIPVFRVKLAVFTFSGVTAGIAGALFASLQSYITPE 232

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
            F F  ++     +++GG   +      T +L  + EL   +  + 
Sbjct: 233 TFVFELSLFFFVCIVIGGRGVIMGPFVGTIVLAALPELVAPLARWG 278


>gi|312200548|ref|YP_004020609.1| inner-membrane translocator [Frankia sp. EuI1c]
 gi|311231884|gb|ADP84739.1| inner-membrane translocator [Frankia sp. EuI1c]
          Length = 468

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 80/331 (24%), Positives = 144/331 (43%), Gaps = 35/331 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG----- 85
               S     SM   I IY + A GL++V+G  G+L L  +  +AIGAY+          
Sbjct: 139 PMFFSTAAQQSMVNDIGIYALLALGLNVVIGYAGMLDLGYIAFFAIGAYATAYFSYKHTS 198

Query: 86  ------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                 + + L+ + + P++ +++   G+I+G P+L+ RGDYLAI TL   EI Q ++  
Sbjct: 199 PPLPVHAPFSLNPFFVFPIAFVLAALAGIILGAPTLRLRGDYLAIVTLGFGEIIQ-LIAN 257

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
               TNG  G +    L          +    F  ++ +     YY+LL +  +    + 
Sbjct: 258 NSSWTNGPRGAFGVPHLS---------VHIGGFNYAWKLDPRPYYYLLLVIIVIVMLALG 308

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L R+ I  AW  IR+++ A  +     +  KL AFA+ ++  G AG  FA+ +   +P 
Sbjct: 309 RLERSRIGRAWAAIREDEIAAEATGVPTLRMKLLAFAIGASVSGFAGVLFASKQFF-NPG 367

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +F    + +V++IVI GGM +   +   + +L G+                  D      
Sbjct: 368 VFSLQASFLVVTIVIFGGMGNRLGVVVGSVVLQGLAFYLR-------------DKVPATD 414

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                   + ++++ R   ++  R     ++
Sbjct: 415 RYIWFGAVVIVMMIFRPQGVVPSRRRGREIK 445


>gi|192290152|ref|YP_001990757.1| ABC transporter [Rhodopseudomonas palustris TIE-1]
 gi|192283901|gb|ACF00282.1| ABC transporter related [Rhodopseudomonas palustris TIE-1]
          Length = 621

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 56/307 (18%), Positives = 116/307 (37%), Gaps = 24/307 (7%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL-SIWLLI 96
           +   +  ++L + +   G  I+ G  GLLS      Y +G +    L     + S+WL +
Sbjct: 29  FSTDLLTRVLNWGLIGLGFDILFGLTGLLSFGQAAFYGVGGFVTAYLLVSGAVGSVWLAL 88

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK-WKPITNGKAGIYVADR 155
            V    +G  G+++G  +++  G Y  + TL   ++   I        T G+ GI     
Sbjct: 89  LVGTASAGVFGLVVGWFAVRRIGIYFTMITLAFGQMAYFIENSPLSDYTGGENGIPGVPA 148

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                         F   +  +   + MY +   + FL   +   + R+ +      I++
Sbjct: 149 PTLG----------FGADAFRISAGLPMYVLFAVIFFLGYVLARRIVRSPVGAILLAIKE 198

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N      L   +   KL+AF +++ + G+AG    + +  + PD F    +  ++   I+
Sbjct: 199 NTGRVAMLGHDVPAYKLTAFVIAALYAGLAGGLLGSFQSYMPPDAFSLETSGQLVVQTIV 258

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  +L       A+            + +    L+    F M    ++ IA  ++++  
Sbjct: 259 GGAGTLIGPLVGAAV------------WLWLRDNLQLIPGFAMLWKLVLGIAFIVLVIGL 306

Query: 336 SHSLLRL 342
              +   
Sbjct: 307 RRGVCGE 313


>gi|146341488|ref|YP_001206536.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. ORS278]
 gi|146194294|emb|CAL78316.1| putative branched-chain amino acid ABC transporter, permease
           protein [Bradyrhizobium sp. ORS278]
          Length = 333

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 112/302 (37%), Gaps = 25/302 (8%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++ + +LIY +   G +++ G  GLLS         GAY   I   R+GL  +  +P++ 
Sbjct: 45  ALAVNVLIYGVVVMGYNLLFGYTGLLSFGHAAFSGAGAYLTGIAIGRWGLPWFAAVPLAI 104

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
             S A   ++G  S + RG Y ++ TL ++++   + ++   +T G+ G           
Sbjct: 105 AASTALAALIGTISTRTRGIYFSMVTLALAQLVYYVALQASSLTGGENG----------L 154

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                            +  +  YY+L+    L+  +   +  +        IR+N++  
Sbjct: 155 RGFTVDRINLFGLPINFLDPVNKYYLLMAFAALALWVQSRILNSPFGAVIEAIRENEQRA 214

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +    +   KL  F +S A   + G   A     +  D   +  + +++ +V+LGG  S
Sbjct: 215 RACGYDVERCKLIVFMLSGAISAVGGCMSALHLSIVPLDSLHYQTSGMIVMMVLLGGARS 274

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                   A  + + ++      ++                 ++     + +L     + 
Sbjct: 275 FFGPFIGAATFLILEDVVSLWTPHW---------------QIVVGAIFVVFVLFLPKGIW 319

Query: 341 RL 342
             
Sbjct: 320 GT 321


>gi|78223028|ref|YP_384775.1| inner-membrane translocator [Geobacter metallireducens GS-15]
 gi|78194283|gb|ABB32050.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Geobacter metallireducens GS-15]
          Length = 328

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 76/321 (23%), Positives = 142/321 (44%), Gaps = 29/321 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +   +L LFL       Y+ ++ + + I+ + A  L++++G  G +SL     + +GAY+
Sbjct: 16  ILFTILILFLPLAFKGGYLLNVFVFVGIHTLLAVALNLLLGYAGQISLGHAAFFGLGAYA 75

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             IL + +G + WL + V A   G    I+G P LK +G YLA+ATL    I      + 
Sbjct: 76  SGILTATHGQNPWLAMAVVAAAVGTLAFIIGFPILKLKGHYLAMATLGFGIIVYIAFNEA 135

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G +G      L   G +  +  +               YY++ GM  ++  + L 
Sbjct: 136 VELTGGPSGFSGIPNLSLGGFSFDTDFKN--------------YYLIWGMTLVTILLSLN 181

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  + I    + I D++ A   +   + F K+  FA+S+    +AG+ +A +   +SP  
Sbjct: 182 LVNSRIGRGLKAIHDSEVAARVMGVNVRFLKVQIFALSAVISSIAGSLYAHTMTFVSPTS 241

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F F+ ++ ++++VI+GG+ S+       A+L  + E+      Y                
Sbjct: 242 FGFNFSVELVTMVIIGGLGSIYGSFLGAALLTFLPEILRAFQDY---------------D 286

Query: 321 TTLMVIALFLVILMRSHSLLR 341
             +  + L  + L     L+R
Sbjct: 287 IVVYGLLLIFMTLFMPGGLVR 307


>gi|51891961|ref|YP_074652.1| branched-chain amino acid ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
 gi|51855650|dbj|BAD39808.1| branched-chain amino acid ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
          Length = 349

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 72/338 (21%), Positives = 124/338 (36%), Gaps = 41/338 (12%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L V   ++L L         Y   +    LI    A GLS++ G  G  SL  V  Y 
Sbjct: 27  AALIVALYIVLSLLRQQGIIGTYWGMILDLALITTTSAIGLSLIYGFAGQFSLGHVAFYG 86

Query: 76  IGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           IG Y    +   Y    L+  L +    + +     ++GLP L+ R DYL IATL    I
Sbjct: 87  IGGYVSAYITKAYGATTLNFVLGLAAGTLAAALIAFLIGLPILRLRSDYLGIATLGFGVI 146

Query: 133 FQNILIKWKPIT---NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            +  +     I+    G  G+    RL                              +  
Sbjct: 147 VKVFMDNSDKISKLLGGSMGMTGIPRLTTFP-------------------------WVFW 181

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              L   +   L  ++   A  ++R+++ A   +       K+ AF +  A  G+AG  +
Sbjct: 182 SAVLVILLARNLVHSSHGRACISVREDEIAADIMGIDTTRFKMLAFVLGCAMAGLAGGLY 241

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A     + P  F+F ++  V+ IV+LGG+ SL+    A   ++ + E+   +        
Sbjct: 242 AHLYVYLHPKSFEFLKSFDVLLIVVLGGLGSLTGTVVAGMGVVFLQEVLRDV-------- 293

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                 F      +  + L +++++R   L+     S 
Sbjct: 294 --LGQQFLEWRGVVYALVLIVLMILRPQGLMGGWEFSL 329


>gi|332284562|ref|YP_004416473.1| high-affinity branched-chain amino acid transport system permease
           protein [Pusillimonas sp. T7-7]
 gi|330428515|gb|AEC19849.1| high-affinity branched-chain amino acid transport system permease
           protein [Pusillimonas sp. T7-7]
          Length = 345

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 76/322 (23%), Positives = 136/322 (42%), Gaps = 17/322 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A +    L L L    +  Y   +   + I+   A GL+I+ G  GL+SL       +GA
Sbjct: 24  AWMLVFGLALLLYPFLANDYWLYLACLVAIHAASATGLNILTGYTGLVSLGQAAFMGLGA 83

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L  RYG    L + V+ +++   G+++G+PSL+ +G YLAI T+  S I   I  
Sbjct: 84  YTVAVLEQRYGTPFLLNLIVAGVVAMLGGLVVGIPSLRVKGLYLAIVTIAASFIVHFIFG 143

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                T G  G+ V   + F      S                 +Y++++ +  L     
Sbjct: 144 NLA-FTGGSGGMTVPPPVLFGVALDTSFK---------------IYWLIVPVTILMVLGA 187

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L RT +  A+  IRD   +   L   ++  KL +F +SS + G+AG  +A     ++P
Sbjct: 188 ANLFRTRVGRAFIAIRDRDISAEVLGIPLLRYKLLSFGLSSFYAGVAGGLWAYFFRVVTP 247

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F    +I  ++ +I+GGM S+       A +  V E+   +               + 
Sbjct: 248 ESFPLILSIFFLAAIIVGGMGSILGAILGAAFMTMVPEVLR-LVIGLLPIEGDTLRYVSP 306

Query: 319 RHTTLMVIALFLVILMRSHSLL 340
             T +  + + + ++     L 
Sbjct: 307 VRTIVFGLLIVVFLIFEPQGLA 328


>gi|325293763|ref|YP_004279627.1| urea/amide ABC transporter transmembrane protein [Agrobacterium sp.
           H13-3]
 gi|325061616|gb|ADY65307.1| urea/amide ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 537

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 96/297 (32%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       IGAYS  ++          L   S  I+     ++ 
Sbjct: 258 AAIGLAITFGVMGIINMAHGEMVMIGAYSTFMVQELIRSHFPGLFDWSLAIALPAAFLVT 317

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       +   +     + +L  W      + G+              S      
Sbjct: 318 ACVGLIMER--GVIRYLYGRPLETLLATWGISLILQQGVRSIFGPTNREVGSPSW-MSGS 374

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F   ++ +     +++     +  ++++ L+R+A     R +  N++   S+     +  
Sbjct: 375 FSVGYLNFTWNRVWIVCFSLSVFFALLVLLKRSAFGLQMRAVTQNRRMASSMGIRTPWVD 434

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              FA+ S   G+AG   A S+          S  I    +V+ GG+ +L         L
Sbjct: 435 AFTFALGSGVAGLAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGALSL 492

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             + +                          L+++ + L I  R   L  L+  +  
Sbjct: 493 GVLNKFLEPTVGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAIE 536


>gi|224541726|ref|ZP_03682265.1| hypothetical protein CATMIT_00898 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525330|gb|EEF94435.1| hypothetical protein CATMIT_00898 [Catenibacterium mitsuokai DSM
           15897]
          Length = 315

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 73/323 (22%), Positives = 138/323 (42%), Gaps = 41/323 (12%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +L++V   +L +    +    Y   + I   I ++ A  L++  G LG L+L      +
Sbjct: 13  FILSIVIFAVLMIGTATSVINSYWQGVLILCGINIILAVSLNLAAGYLGQLTLGHAGFMS 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY+  ++     L   + + + A+ +G  G+I+G+P L+ +GDYL I TL  +EI + 
Sbjct: 73  VGAYTSALISIYLNLPFIVSLLIGAIAAGIIGLIIGIPVLRLKGDYLCIITLAFNEIIRV 132

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I+     ITNG  G+                                    +     ++ 
Sbjct: 133 IMNNL-DITNGAKGLIGIPMNTN-------------------------LVYVFIAMIITI 166

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++  + ++    A  +IR+++ A       + + K+ AFAVS+ F G+AG  +A     
Sbjct: 167 FVVYSIVKSRHGRAIISIREDETASELSGIDVGYYKVFAFAVSAIFAGLAGGLYAHYYTV 226

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           I P  F F++++ ++ +V+LGGM +L     A  +L  + EL                 S
Sbjct: 227 ILPKGFDFNKSVEILVMVVLGGMGNLKGSIIAAIVLTIIPELL---------------IS 271

Query: 316 FNMRHTTLMVIALFLVILMRSHS 338
           F+     L  I L   ++++   
Sbjct: 272 FSQYRMLLYAIVLIAAMILKGTG 294


>gi|88797768|ref|ZP_01113356.1| inner-membrane translocator [Reinekea sp. MED297]
 gi|88779445|gb|EAR10632.1| inner-membrane translocator [Reinekea sp. MED297]
          Length = 350

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 78/310 (25%), Positives = 142/310 (45%), Gaps = 18/310 (5%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
           +  Y+  +  QI IYV+   G++++VG  GL+SL     +A+GAY+ VIL         L
Sbjct: 40  ADNYVLLLAGQIAIYVIAVTGVNVLVGYTGLMSLGHGAFFAVGAYTTVILHQYVEHLFPL 99

Query: 95  -LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIY 151
             + VS +++   G + GLPSL+ +G YLA+ATL  + I    + +    P T G+ GI 
Sbjct: 100 ITLLVSIVVAAGFGFLFGLPSLRVKGLYLAVATLSANFIILFFIRQDWAAPWTGGRQGIE 159

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
             + ++F    + +  +               YY ++ +C         L RT    A  
Sbjct: 160 TPNAMFFGQEMLSNTQK---------------YYFIIPICLAMVLFAQNLFRTRFGRALI 204

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            IRDN  +   L  ++   KL +FA+S+A+ G AG+ +A     I P+ F  + +I ++ 
Sbjct: 205 GIRDNDHSAEILGISLYAYKLKSFAISAAYCGAAGSLWAYFFPAILPEDFSLNLSITLVV 264

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
            +I GGM         T +++ + E+   ++ +      +    F+     +  + + L 
Sbjct: 265 CLIAGGMGRTLGPVFGTLLILLIPEMLKIVSGWATGGDGRALIHFSSIRDIVFGLIIILF 324

Query: 332 ILMRSHSLLR 341
           ++     L+ 
Sbjct: 325 LIFEPMGLVS 334


>gi|146339660|ref|YP_001204708.1| branched chain amino acid ABC transporter ATP-binding protein
           [Bradyrhizobium sp. ORS278]
 gi|146192466|emb|CAL76471.1| putative Branched-chain amino acid ABC tranpsorter, ATP binding
           protein [Bradyrhizobium sp. ORS278]
          Length = 583

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 90/310 (29%), Gaps = 29/310 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 Y+ ++ ++     + A  + I+ G  G L+      + IGAY+  I+ + YG  
Sbjct: 19  PLLLDTYLVNILVRACFVAIAAITVDIMWGYCGTLTFGQSAFFGIGAYALAIMFTEYGFG 78

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            W +             +                   +  +   I++     + G     
Sbjct: 79  TWQIFAAIGAAVAVAAAVAAFTGWLSFYPGSTPLYASVISLVVPIVLVQILYSGGT---- 134

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                  SF +       +       +A + L + R+       
Sbjct: 135 -----------FTGSSSGLVGFESFDLEIETWLRLAGLGLLATAVLALVVMRSDTGRLLS 183

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +RDN      L       ++    + +    +AG F+A      +P+   F+    ++ 
Sbjct: 184 ALRDNDARCTYLGIDTSRLRIVVLVLCAIVSALAGFFYAGFGAVAAPENASFTFGTNLVI 243

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +V LGG  ++         +            Y +                ++ +AL  V
Sbjct: 244 MVALGGRGTVIGPVIGALCIEVASAYLANSLPYVWE--------------LIVGVALIAV 289

Query: 332 ILMRSHSLLR 341
           IL+    LL 
Sbjct: 290 ILVFPDGLLG 299


>gi|91789684|ref|YP_550636.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91698909|gb|ABE45738.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas sp. JS666]
          Length = 349

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 17/324 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  L L L      + +Y   +   + I +    GL+I+ G  GL+SL       +GA
Sbjct: 24  VWMGVLALTLCAFPFVASEYWLYLACLVAINIASTSGLNILTGYTGLVSLGQAAFMGLGA 83

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL  R+GL     +     ++   G+++GLPSL+ +G YLAIAT+    I   I  
Sbjct: 84  YTVAILQIRFGLPFVGNLLAGGCVAMLAGVLVGLPSLRVKGLYLAIATIAAGVIAHFIFS 143

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            +  +T G +G+ V                  RF    +     +Y+V++ +  L     
Sbjct: 144 HFSSLTGGSSGLTVPPA---------------RFFGIELDNSFKLYWVIVPVMGLMLLGA 188

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L RT I  A+  IRD   +   L  +++  KL +FA+SS + G+AG  FA     +SP
Sbjct: 189 VNLFRTRIGRAFIAIRDRDISAEVLGISLLRYKLLSFAISSFYAGVAGGLFAYFFRAVSP 248

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK--FDCSF 316
           + F    +I  ++ VI+GGM S+         +  V EL   +  +   +          
Sbjct: 249 ESFPLLMSIFFLAAVIVGGMGSILGSILGAVFMTLVPELLKLIVGWLPLASFGGNAALIL 308

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
           +   T +  + + L ++   H L 
Sbjct: 309 SPVRTIVFGLMIVLFLIFEPHGLA 332


>gi|332284757|ref|YP_004416668.1| putative branched-chain amino acid transport system protein
           [Pusillimonas sp. T7-7]
 gi|330428710|gb|AEC20044.1| putative branched-chain amino acid transport system protein
           [Pusillimonas sp. T7-7]
          Length = 612

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 55/323 (17%), Positives = 117/323 (36%), Gaps = 22/323 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  + L               +  +ILI+ +F  G  ++ G  GLLS      Y  G +
Sbjct: 18  MIVGICLLAAPFVLPHLGMSADLLTRILIWGLFGLGFDLLFGYTGLLSFGQSAFYGTGGF 77

Query: 80  SYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               +L +     + L +    +I+   G+ +G  +L+  G Y A++TL   E+F  +  
Sbjct: 78  VAAYLLTAGIVPHMLLALLCGVVIAALAGLAIGYLTLRRTGIYFAMSTLAFGEMFYFLEN 137

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                  G            +     ++     +P         MY+ +    F+   + 
Sbjct: 138 SLFKEYTGGENGIAGVPPPEIALGFTTINISSGWP---------MYWFVAVFFFIGYLVA 188

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + R+      + IR N K   +L  +I   KL+ F +++A+ G+AG      +  + P
Sbjct: 189 RRIVRSPFGAVLKAIRGNPKRAMALGHSIQGYKLTVFVIAAAYGGLAGGLLGVFQSYMPP 248

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           D F    +  ++   ++GG  +L        I + + E    +             +   
Sbjct: 249 DAFSLDTSAQLVIQTVMGGAGTLLGPLLGATIWLYLYEGLQQVA------------NIGA 296

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
               ++ I   +++ +  H +  
Sbjct: 297 YWKLILGIVFVVLVTVFRHGVAG 319


>gi|213691482|ref|YP_002322068.1| inner-membrane translocator [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|213522943|gb|ACJ51690.1| inner-membrane translocator [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|320457555|dbj|BAJ68176.1| branched-chain amino acid ABC transporter permease component
           [Bifidobacterium longum subsp. infantis ATCC 15697]
          Length = 360

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 69/341 (20%), Positives = 129/341 (37%), Gaps = 42/341 (12%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +    ++     +  +  YI  + +   I ++    L++ +G LG L+L C    A
Sbjct: 16  FIGVLAAFGVVMALCESGLADSYIKGIMMTACIAIIMTTSLNLTIGVLGQLTLGCCGFEA 75

Query: 76  IGAYSYVILGSR---------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           IGAY   +                   +   +  +++   G+++G+P+L+  GDYLAI T
Sbjct: 76  IGAYVAALASKYMVAAGIGIDPTTRFLITTLLGGIVACVFGILIGIPALRLHGDYLAIIT 135

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + I+   K                        L +     +   I      YV
Sbjct: 136 LGFGEIIRVIIQNLKVAGG------------------MGLDKGAAGQALIGIDRTANLYV 177

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  ++  ++    R+    A + IRD++ A  +      + K+  FA+S+ F G+AG
Sbjct: 178 VFWIMVVTVVVLFMFSRSRYGRAVKAIRDDEIAAGASGLNTTYLKVLVFAISAFFAGIAG 237

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             FA     ++P M  +  +I  + +V+ GGM SL+    +   L  + EL      Y  
Sbjct: 238 GIFAQYIGSLNPTMAGWLNSINYVIMVVFGGMGSLTGSIVSAIGLTILPELLRAFADY-- 295

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                              + L LV++ R   +      S 
Sbjct: 296 -------------RMLAYSVVLVLVMIFRPQGIFGSWELSL 323


>gi|171912705|ref|ZP_02928175.1| putative branched chain amino acid ABC transporter, permease
           protein [Verrucomicrobium spinosum DSM 4136]
          Length = 325

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 57/306 (18%), Positives = 111/306 (36%), Gaps = 22/306 (7%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y+  + +   I ++ A  L++V G  G  SL       +GAY    +    G S+   
Sbjct: 31  DAYVLQIMLIAGINIILAVSLNLVNGHTGQFSLGHAGFMGVGAYMAAAVSVEMGPSL--- 87

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
             ++ +             +      L  A         ++ ++   +     G     R
Sbjct: 88  --MNLLGGPGPAPHAVTFIISLLVGGLCAAACGWMVGVPSLRLRGDYLAIVTLGFNEIIR 145

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           + F  T   S   F        I +   ++ + G+  +   ++  +  +     +  +RD
Sbjct: 146 VIFQNT--ASNGPFGGALGMRGIPDYTTFFWVFGIAAICIYVVASMVNSTYGRGFLAVRD 203

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  S+    +  K+ AF + + F G+AG  +A     I P  F F +++ +I +VIL
Sbjct: 204 DEVASESMGVNTVRYKVVAFVLGAFFAGLAGGLYAHLFGAIDPKGFGFLKSVDIIIMVIL 263

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S   +  A   L  + E       Y                  +  I L +++++R
Sbjct: 264 GGMGSTLGVVVAAIGLTVLNEQLRDAEKY---------------RMIVFSILLIIMMIVR 308

Query: 336 SHSLLR 341
              LL 
Sbjct: 309 PQGLLP 314


>gi|270308215|ref|YP_003330273.1| ABC-type branched-chain amino acid transport system, permease
           component [Dehalococcoides sp. VS]
 gi|270154107|gb|ACZ61945.1| ABC-type branched-chain amino acid transport system, permease
           component [Dehalococcoides sp. VS]
          Length = 350

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 76/323 (23%), Positives = 143/323 (44%), Gaps = 16/323 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A++   L+ LF        Y   +   I I ++ A GL+I++G  G LS+      A+GA
Sbjct: 26  AMLIGFLILLFSLPFNISSYWLGIMNLIGITIVAAAGLNILMGYCGQLSVGHAGFIAVGA 85

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL S+ G+     +  S +++G  GM+ GLPSL+ +G YLAI+T+    I   ++ 
Sbjct: 86  YTTAILASKLGVPFPFDMIASGIMAGLVGMLFGLPSLRVKGFYLAISTIAAQFIIIWVIN 145

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  +T G  GI +                     +     +   Y++++ +  L+   +
Sbjct: 146 HWSSLTGGFNGIVIPP---------------INLFNFDFTTQGSQYFIIMLVAVLAIFFM 190

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + RT I  A+  IRDN  A   +   +   KL AF +     G+AG+  A     ++ 
Sbjct: 191 KNIARTRIGRAFVAIRDNDLAAEVMGINVFKYKLLAFFIGCFLAGVAGSLMAHWIGYLTA 250

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F  S++I+ + IVI+GG+ +       T  +  + +    ++    ++  +    F  
Sbjct: 251 ENFTLSDSILYVGIVIIGGLGTGVGPIFGTLFIRLLQQGVQYVSPLMGSAFPQLPSGFAA 310

Query: 319 -RHTTLMVIALFLVILMRSHSLL 340
                +  +A+ L +++    L 
Sbjct: 311 GLGPMVFGLAIVLFLVLEPRGLA 333


>gi|127513536|ref|YP_001094733.1| inner-membrane translocator [Shewanella loihica PV-4]
 gi|126638831|gb|ABO24474.1| inner-membrane translocator [Shewanella loihica PV-4]
          Length = 357

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 66/326 (20%), Positives = 131/326 (40%), Gaps = 19/326 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V   ++            Y  ++ IQI    + A GL+I+VG  G +SL     +  GA
Sbjct: 30  LVTCLVIALACAAPLVLDGYFLTLFIQISYLGIAALGLNILVGFTGQISLGHGAFFGFGA 89

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           ++   L + + + +   IP++  ++   GM+ G+P+ + +G YLAIATL    I Q+   
Sbjct: 90  FASAWLNTSFNIPVVFCIPLAGFLTMGVGMMFGMPAARIKGLYLAIATLAAQFIIQDFFG 149

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           + +  + G +G   A    F       +                 Y++ L          
Sbjct: 150 RAEWFSGGSSGAMAAPVSLFGFDFDTDM---------------SFYFIALFALVFMYIWG 194

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+    A+  +RD+  +   +   +   +L +F +SS + G+ GA +A     +S 
Sbjct: 195 CNLMRSRDGRAFVAVRDHYLSAEIMGVKLNKYRLLSFGISSFYAGIGGALYAHYLGYVSS 254

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY----FNSLLKFDC 314
           + F    +I  +++VI+GG+ S+         ++ + E+  GM        + +L     
Sbjct: 255 EGFTILMSIQFLAMVIIGGLGSIKGTLMGVVFMVLLPEVLEGMVGLMKYTDYGNLPMVTD 314

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLL 340
                    + + + L ++     L 
Sbjct: 315 GLAYIKEMAIGLVIILFLIFEPEGLA 340


>gi|262274115|ref|ZP_06051927.1| urea ABC transporter permease protein UrtB [Grimontia hollisae CIP
           101886]
 gi|262221925|gb|EEY73238.1| urea ABC transporter permease protein UrtB [Grimontia hollisae CIP
           101886]
          Length = 549

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 100/306 (32%), Gaps = 21/306 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+   GL+I  G +G++++       +GAY+  +L   +     + + +S   
Sbjct: 263 LSLGSVLVLAGIGLAITFGVMGVINMAHGELIMLGAYTTYVLQQLFPAQTGMALLLSIPC 322

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++G+   +    +L    L      + +L  +      +  +           +
Sbjct: 323 AFMVSGLVGMAIERSVIRHLYGRPL------ETLLATFGISLILQQAVRSIFSPLNRSVS 376

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +      +  +       Y+++    +  S++  L+RT +    R +  N+    +
Sbjct: 377 TPDFMSGMIEVTPMLALTASRMYIIVFCLVVFFSLLFILKRTPLGLQVRAVSQNRAMARA 436

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +     +  ++ F + S   G+AG   +   +         +  I    +V+ GG+ +L 
Sbjct: 437 MGVRSEWVDMATFGLGSGIAGVAGVALSQLTNV--GPNMGQAYIIDSFMVVVFGGVGNLW 494

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L    ++                         L+++ + L I  R   L   
Sbjct: 495 GTLAAGLSLGVFNKVLEPWAGAVLAK-------------ILVLVFIILFIQKRPKGLFPQ 541

Query: 343 RTPSNF 348
           R     
Sbjct: 542 RGRMAE 547


>gi|260495471|ref|ZP_05815597.1| inner-membrane translocator ABC transporter [Fusobacterium sp.
           3_1_33]
 gi|260197008|gb|EEW94529.1| inner-membrane translocator ABC transporter [Fusobacterium sp.
           3_1_33]
          Length = 324

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 75/340 (22%), Positives = 141/340 (41%), Gaps = 45/340 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             I  +L +V   +LF  + +    +Y   + I ILI ++ A  L+I VG LG ++L   
Sbjct: 9   YIITYVLLIVLYFILFSLISSGFISRYQVGILILILINIILAASLNITVGCLGQITLGHA 68

Query: 72  IAYAIGAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
              +IGAY+  +L             + + +  +++G  G I+G+P+L+  GDYLAI TL
Sbjct: 69  GFMSIGAYTAALLTKSGFLSGYQGYIVALIIGGLVAGVIGFIIGIPALRLTGDYLAIITL 128

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              EI + +LI++   T G  G+    R+                             ++
Sbjct: 129 AFGEIIR-VLIEYFKFTGGAQGLTGIPRVNNFT-------------------------LI 162

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +   S   +  +  +    A   IR+++ A  +      + K  AF +S+ F G+AG 
Sbjct: 163 YVITIFSVIFMYSIMTSRHGRAVLAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGG 222

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A +   +    F ++ +I ++ +V+LGGM S +    +  +L  + E+      Y   
Sbjct: 223 IYAHNLGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAVVLTILPEVLRSFAEY--- 279

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  + L +++L R   LL  +    
Sbjct: 280 ------------RMIVYPLILIIMMLFRPQGLLGRKEFQI 307


>gi|83312690|ref|YP_422954.1| ABC-type branched-chain amino acid transport system, permease
           component [Magnetospirillum magneticum AMB-1]
 gi|82947531|dbj|BAE52395.1| ABC-type branched-chain amino acid transport system, permease
           component [Magnetospirillum magneticum AMB-1]
          Length = 358

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 65/324 (20%), Positives = 133/324 (41%), Gaps = 18/324 (5%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
                +L           Y+ ++ IQI  Y + A GL+I+VG  G +SL     +  GA+
Sbjct: 33  WCIAGILLAAASPLVLSNYLLALLIQIGFYGIAALGLNILVGCTGQISLGHAAFFGFGAF 92

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +   L + +G+ + L IP++ +++   G++ G+P+ + +G YLAIAT     I ++   +
Sbjct: 93  ASAWLNNTFGVPVLLAIPLAGVMTTLLGLLFGIPAGRLKGLYLAIATFASQFILEDFFAR 152

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
               T G +G        F          F+      V+  +    +L            
Sbjct: 153 ANWFTGGSSGAMANPISLFGYEVGGDKGFFYVVLVFVVVMYVLGTNLL------------ 200

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
              RT    A+  +RD+  +   +   +   ++ +F +SS + G+ GA +      +S +
Sbjct: 201 ---RTRDGRAFVAVRDHYLSAEVMGINLTKYRILSFGISSFYAGVGGALYGHYLGYVSAE 257

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF---YYFNSLLKFDCSF 316
            F    +I  + ++I+GGM S+      TA ++ + E          ++   +     + 
Sbjct: 258 GFTILLSIQFLGMIIIGGMGSVMGTLMGTAFMVLLPEATEAAVSTVKHFTGDIPALTSAL 317

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
                  + +A+ L ++     L+
Sbjct: 318 AYIKEATIGLAIVLFLIFEPDGLV 341


>gi|89067742|ref|ZP_01155196.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
 gi|89046712|gb|EAR52767.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
          Length = 651

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 98/311 (31%), Gaps = 26/311 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLI 96
                   IY + A GL+I  G +G++++       +GAY+  +     + +  SI L +
Sbjct: 362 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGFVVQQFVTNHTASILLAV 421

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++  ++ A G+ +    +++   +  + TL+ +      L +      G     +    
Sbjct: 422 PLAFAVTFAAGVALERLVIRW-LYHRPLETLLATFGVSIALQQLAKNIFGTQARPLTAP- 479

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     +      +  V        +           +  + RT +    R +  N
Sbjct: 480 --------GWLDGAWVINDVVAISYIRIAIFALALLFLGLFLFIMNRTRLGLETRAVTQN 531

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +   S+        +  F + S   G+AG          S         +     V++G
Sbjct: 532 PRMAASMGINPDRVNMLTFGLGSGIAGIAGVVIGLFAKVTSE--MGGDYIVQSFMTVVVG 589

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++        ++ G  +    +N     +   +   F +                R 
Sbjct: 590 GVGNIWGTLAGATMIGGFQKGVEWLNPSNTLAAQTYMIVFIIIFIQF-----------RP 638

Query: 337 HSLLRLRTPSN 347
             ++ L+  + 
Sbjct: 639 RGIIALKGRAA 649


>gi|134101166|ref|YP_001106827.1| amino acid ABC transporter permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133913789|emb|CAM03902.1| amino acid ABC transporter permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 339

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 63/323 (19%), Positives = 118/323 (36%), Gaps = 27/323 (8%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++    L +   +     +I S+G+ I  Y + A   + V G  G +SL       +GAY
Sbjct: 1   MLALAALVIAFPSLAPDPFILSVGVVITSYAVLATSWNFVGGFTGYISLGHAAYSGLGAY 60

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  +L  R G   W+ +    ++     + +G+ SL+ RG    I ++ +  I   +   
Sbjct: 61  ATGLLIVRAGFDPWVALFAGGVLVALLAVPIGIASLRVRGASFVIVSIALVLITLLVFQS 120

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W   T G  G+ V               RFF   ++ +   +  ++V+            
Sbjct: 121 WGDFTGGSDGLRVPRPFGPDVMRPEQHERFFYLHAALLAVALLCWWVI------------ 168

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP- 258
              R+      + IR+++    SL       KL AF VS+ F  +AG  +A     + P 
Sbjct: 169 --DRSRFGAGLKAIREDEDKAQSLGVPTFAYKLVAFVVSAFFTALAGGLYALWFGFLDPV 226

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F       ++ + +LGG+ SL        ++   +E                      
Sbjct: 227 FQFSILAGSYLVLMSLLGGIRSLFGPVLGAVVVGYAMEYFKA------------QYGDTQ 274

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
            H   M + L +V+L     ++ 
Sbjct: 275 LHLVAMGVLLAVVVLFMPDGIIP 297


>gi|83941690|ref|ZP_00954152.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
 gi|83847510|gb|EAP85385.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
          Length = 358

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 77/344 (22%), Positives = 145/344 (42%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ ++Y   L L       +    +    +  +++S+ +  LIY + A GL+I+VG  
Sbjct: 20  FPIKFDRYRYYLVL------FIAIAVIPFVINDYWVNSLFLPFLIYAIAAIGLNILVGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+    + +   +S+ + + +S +++   G++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKFMTAFPDVSMLVHVLLSGLVTAGVGVLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N  A   ++           +      +          
Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYSASGQISAPERTFFGIEITGPNTQAW---------A 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L     SA +   L R ++   W  IRD   A   +    + AKL+AFAVSS FI
Sbjct: 185 TYLFCLMFVIFSAYVARNLTRGSVGRKWMAIRDMDIAAEIIGVNPLRAKLTAFAVSSFFI 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F A         + F   ++ +V+ ++I+GG+ S+       A L+ +      
Sbjct: 245 GISGALFFAVYLGAVEVGEAFGIQKSFLVLFMIIIGGLGSIFGSFAGAAFLVLLPVALKI 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +   +F                ++   + + ++   H L +L  
Sbjct: 305 VGVDWFGWPTDI---VAHLQLVIVGGLIIIFLIAEPHGLAQLWR 345


>gi|262283199|ref|ZP_06060966.1| branched-chain amino acid permease [Streptococcus sp. 2_1_36FAA]
 gi|262261451|gb|EEY80150.1| branched-chain amino acid permease [Streptococcus sp. 2_1_36FAA]
          Length = 317

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 78/340 (22%), Positives = 141/340 (41%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + +   L +   +L+ +  G      +   +  +I I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNLLWLALILAGFVLITVLAGGGILNAFHLQILEEIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G+      + +  + + A I+G   + +G+P+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYAVAIIGTKSPTYPAFFAAMILGAFIAGLVALGVGIPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + +++    +TNG AGI                                    +
Sbjct: 126 GVSEIIRILIVNGGEVTNGAAGILSIPGFTSWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++    L   R+ +     ++R+++ A  S+      AK+ AF   +    +AGA
Sbjct: 161 YFFVVITTLFTLNFLRSPLGRKTLSVREDEIAAESVGVNTTKAKVVAFVFGAITASIAGA 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F+  I V+ IV+ GG+ S++    A  +L  +  L          
Sbjct: 221 LKAGFIGAVVPKDYSFTNTINVLIIVVFGGLGSMTGTIIAAIVLGVLNMLLQ-------- 272

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                   F+     +  +AL LV++ R   LL       
Sbjct: 273 -------EFSSIRMIIYSLALILVMIFRPGGLLGTWELQL 305


>gi|297528882|ref|YP_003670157.1| inner-membrane translocator [Geobacillus sp. C56-T3]
 gi|297252134|gb|ADI25580.1| inner-membrane translocator [Geobacillus sp. C56-T3]
          Length = 324

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 72/344 (20%), Positives = 140/344 (40%), Gaps = 42/344 (12%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  +   +  +LA  +  ++   + +     +  +    + I VM A  L +++G  G  
Sbjct: 5   KRTRGFWVSVILAFAFFAVVEWLIASGTLNVFYVNTLFFMAINVMLAASLHLIIGITGQF 64

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S+     +A+GAY+  ++  +  L   + +  + + +   G+I+G+PSL+ +GDYLAIAT
Sbjct: 65  SIGHAGFFAVGAYASAVMTMKLELPFAVGVLTAGIAAMLAGLIIGVPSLRLKGDYLAIAT 124

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI +  L+    +                                  +  +  +  
Sbjct: 125 LGFGEIVRIALLNIDYVGGAS---------------------------GMTVTHMTTWPW 157

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +    F++  +I     +    A  +IR+++ A  ++     + K++AFA+ S F G+AG
Sbjct: 158 VFACLFVTILVIANFTNSTHGRACISIREDEIAADAMGINTTYYKVAAFAIGSFFAGIAG 217

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A +A     I P  F F ++  ++  V+LGG+ SLS    A  +L  V            
Sbjct: 218 ALYAHHFYIIQPSNFGFLKSFDILIFVVLGGLGSLSGAVMAAVLLTIVSTFLQNY----- 272

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                           +  I L LV+L R   L+  +  S+  +
Sbjct: 273 ----------PETRMIIYSIVLILVMLYRPTGLMGTKELSSLFK 306


>gi|71905894|ref|YP_283481.1| inner-membrane translocator [Dechloromonas aromatica RCB]
 gi|71845515|gb|AAZ45011.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Dechloromonas aromatica RCB]
          Length = 358

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 75/345 (21%), Positives = 147/345 (42%), Gaps = 23/345 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            +F +R ++      +  +   ++ FL +    S+ +  ++ I  LI+ + A GL+I+ G
Sbjct: 18  QLFPIRQDR------IGVITLLVVAFLGVPFFASEYWFSAILIPFLIFALAALGLNILTG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGD 120
             G LSL      A+GAY+      R      L+   ++ + +   G++ GLPSL+ +G 
Sbjct: 72  YAGQLSLGSAAFMAVGAYAAYNFQLRIEGIPILVSFALAGLTAAGVGILFGLPSLRIKGF 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL         L K+  ++N  +   ++ +                     +   
Sbjct: 132 YLAVATLAAQFFIVWCLTKFPWLSNNSSSGVISTQQLIFFGHE-------------LKTP 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y ++L +  + A     + R+    AW  +RD   A   +   ++  KL AFAVSS 
Sbjct: 179 VEKYLLVLSIVVVMALAAKNMVRSTTGRAWMAVRDMDVAASVIGIKLMPTKLLAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           + G+AGA +A      + PD F    +  ++ ++I+GG+ S+       A ++ +     
Sbjct: 239 YCGVAGAMYAFCYLGSVEPDGFSLEMSFKILFMIIIGGVGSIMGSFLGAAFILLLPIFLD 298

Query: 300 GMNFYY--FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               ++     L     + +    T+    +   +++  H L RL
Sbjct: 299 IALPFFADLFGLPFSSATVSHIQITVFGALIMFFLIVEPHGLARL 343


>gi|196249268|ref|ZP_03147966.1| inner-membrane translocator [Geobacillus sp. G11MC16]
 gi|196211025|gb|EDY05786.1| inner-membrane translocator [Geobacillus sp. G11MC16]
          Length = 324

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 69/344 (20%), Positives = 141/344 (40%), Gaps = 42/344 (12%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  +   +  +LA  +  ++   + +     +  +    + I V+ A  L +++G  G  
Sbjct: 5   KRTRGFWVSIILAFAFFAVVQWLITSGTLNIFYVNTLFFMAINVILAASLHLIIGITGQF 64

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S+     +A+GAY+  I+  +  L   + + V+ + +   G+I+G+PSL+ +GDYLAIAT
Sbjct: 65  SIGHAGFFAVGAYASAIMTMKLQLPFAVGVLVAGVAAMLAGLIIGVPSLRLKGDYLAIAT 124

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + +L+    +                                  +  +  +  
Sbjct: 125 LGFGEIVRIVLLNIDYVGGAS---------------------------GMTVTHMTTWPW 157

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +     ++  +I     +    A  +IR+++ A  ++     + K++AFA+ S F G+AG
Sbjct: 158 VFACLLITIIVIANFTNSTHGRACISIREDEIAADAMGINTTYYKVAAFAIGSFFAGIAG 217

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A +A     I P  F F ++  ++  V+LGG+ SLS    +  +L  V            
Sbjct: 218 ALYAHHFYIIQPSNFGFLKSFDILIFVVLGGLGSLSGATISAVLLTIVSTFLQNY----- 272

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                           +  + L  V+L R   L+  +  ++ L+
Sbjct: 273 ----------PETRMIIYSLVLIFVMLYRPTGLMGKKELTSLLK 306


>gi|212636244|ref|YP_002312769.1| branched-chain amino acid AbC transporter permease [Shewanella
           piezotolerans WP3]
 gi|212557728|gb|ACJ30182.1| Branched-chain amino acid ABC transporter, permease protein,
           putative [Shewanella piezotolerans WP3]
          Length = 357

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 65/326 (19%), Positives = 131/326 (40%), Gaps = 19/326 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   L+            Y  ++ IQI    + A GL+I+VG  G +SL     +  GA
Sbjct: 30  LMTIALIAIACGAPLVLDGYFLTLFIQISYLGIAALGLNILVGFTGQISLGHGAFFGFGA 89

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           ++   L + + + + L IP++  ++ A GM+ G+P+ + +G YLAIATL    I ++   
Sbjct: 90  FASAWLNTSFQIPVVLCIPLAGFLTMAVGMMFGMPAARIKGLYLAIATLAAQFIIEDFFA 149

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           + +  + G +G   A    F                         YY+ L          
Sbjct: 150 RAEWFSGGSSGSMAAPVNLFGFDFDTDQ---------------SFYYIALFALVFMYIWG 194

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+    A+  +RD+  +   +   +   +L +F +SS + G+ GA +A     +S 
Sbjct: 195 CNLMRSRDGRAFVAVRDHYLSAEIMGVKLNKYRLLSFGISSFYAGIGGALYAHYLGYVSA 254

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY----FNSLLKFDC 314
           + F    +I  +++VI+GG+ S+         ++ + E+   +        + ++     
Sbjct: 255 EGFTILMSIQFLAMVIIGGLGSIKGTLMGVVFMVLLPEMLESIVALMKYTDWGNIPMVTD 314

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLL 340
                    + + + L ++     L 
Sbjct: 315 GLAYIKEMAIGLVIILFLIFEPEGLA 340


>gi|110347274|ref|YP_666091.1| inner-membrane translocator [Mesorhizobium sp. BNC1]
 gi|110287450|gb|ABG65508.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Chelativorans sp. BNC1]
          Length = 291

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 65/305 (21%), Positives = 132/305 (43%), Gaps = 22/305 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  ++     I ++ A  L++++G  G+ S+     Y +GAY   +L   Y   + L +
Sbjct: 3   NYFANLVTVTGISMILAISLNLLIGYAGIFSMAHAAFYGVGAYVAALLALHYTAELTLAV 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++ +   A  +++ LP+L+ RG+Y   A+L +  I   +  +W  +T G +G+      
Sbjct: 63  PLAMVTCAAASLLISLPALRVRGEYFVAASLGLQVIAFTVFEQWHSVTGGLSGLIGIPVA 122

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G ++ S + F     + V         LL              RTA     R IRD+
Sbjct: 123 ELFGYSLASPLAFMGVTIALVALVALAVICLL--------------RTAFGRDLRAIRDD 168

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  +    +   K  A A+SSA   +AG  +A +   ++P+ F  + +++V+++VI+G
Sbjct: 169 ETAAAAAGKNVAVIKSIAVAISSALCAVAGVLYAFNIAFVNPESFTLNLSVLVMAMVIIG 228

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  +++      A++  +      +             +       L  +A+ L+++ R 
Sbjct: 229 GAGTITGPIIGAALIQCLPAALSWLPLP--------PQNIGYLQQILYGLAMVLLMIYRP 280

Query: 337 HSLLR 341
             L+ 
Sbjct: 281 AGLMG 285


>gi|167770772|ref|ZP_02442825.1| hypothetical protein ANACOL_02118 [Anaerotruncus colihominis DSM
           17241]
 gi|167667367|gb|EDS11497.1| hypothetical protein ANACOL_02118 [Anaerotruncus colihominis DSM
           17241]
          Length = 385

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 125/358 (34%), Gaps = 15/358 (4%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
             ++ +       +L  +  +LLF+  G    Q  + S+  +  I  + A  ++++ G  
Sbjct: 1   MHMKKSTKRICSLVLIALAVVLLFILDGHKNEQGMLISILQKSAILAIVAVAMNLLNGFT 60

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI----------SGACGMIMGLP 113
           GL SL      +IGAY   IL         +                  +G   +    P
Sbjct: 61  GLFSLGQAGFMSIGAYVTAILMIPVASLDGVYYMNGVAPGIRSMKEAMEAGPAWLQAAYP 120

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR----F 169
            L      L  A          + +K   +     G     R  F    + ++       
Sbjct: 121 FLALIAGGLIAAAFAALIGIPVLRLKSDYLAIATLGFSEIIRAVFSSPQMDTITNGSYGL 180

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
            + P+   ++ + + +    +  +  ++++ L  +    A++ IR+++ A  ++   +  
Sbjct: 181 NKVPTFPKLFGLPVLFTPFIIAAVCIALMVLLINSTYGRAFKAIREDEIAAEAMGVNLFK 240

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            K  +F +SS F  ++G   A     I    F  +    ++ IV++GG+ S++    +  
Sbjct: 241 HKQLSFVISSFFTAISGGLLAMFMRSIEAKTFSITLTYDILLIVVIGGIGSVTGSVLSAF 300

Query: 290 ILIGVVE-LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
           ++    E      +        +           +  + L +V+L     L+  +  S
Sbjct: 301 LVTASKEWWLRFFDQPLIIGGWEISLFRTGFRMVVFSVLLMVVVLFYRRGLMGDKEFS 358


>gi|115523713|ref|YP_780624.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115517660|gb|ABJ05644.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 326

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 68/327 (20%), Positives = 133/327 (40%), Gaps = 24/327 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L+       L   +       Y+ ++ I  L+Y   +   +I+ G  G +SL   + + +
Sbjct: 13  LITAAVLACLAASVPMFVKDVYVQNIMILTLMYAALSQAWNILGGYCGQISLGHALYFGL 72

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +L +++G+  W  +    +IS    M +G P+ + +G Y  IAT++++EI   +
Sbjct: 73  GAYTTALLFTKFGVLPWFGMLGGGVISALIAMALGYPTFRLKGHYFVIATIVIAEIGLLL 132

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
              W                         + +       F   ++  +Y  L  C ++  
Sbjct: 133 FHNWDW-------------AGAALGIDIPMRQDSWANFQFPRSKLPYFYFALAFCCVAWF 179

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +  WL  +     WR ++DN +A  SL   +  +K+ A AVS+    + G+F+A     I
Sbjct: 180 VTWWLENSKWGFWWRAVKDNPEAAESLGVVVFNSKMGAAAVSAFLTAVGGSFYAMFVSYI 239

Query: 257 SPDMFKFSENIIVISI-VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            P+     +  +++++  +LGG+ +L       AILI + EL           +      
Sbjct: 240 DPESVMAFQFSLLMALPAVLGGIGTLWGPVLGAAILIPLTELTRSFIGGSGRGV------ 293

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                  +    + L+ L R   L+ L
Sbjct: 294 ----DLIVYGTVIMLIALARPQGLIGL 316


>gi|260430946|ref|ZP_05784917.1| branched-chain amino acid ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
 gi|260414774|gb|EEX08033.1| branched-chain amino acid ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
          Length = 401

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 132/369 (35%), Gaps = 36/369 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYID-------SMGIQILIYVMFAWGLSIVV 60
           LNK D  L ++  +  LL    L    S   +         +  + +I+ +FA G +I+ 
Sbjct: 4   LNKKDTSLLIVVAILTLLAPFILNPFPSDSAMAQFNAGYPDLMQRFVIFGIFAIGFNILF 63

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G LS        +G+YS V +      ++   I +S +++G   +++G  SL+  G 
Sbjct: 64  GLTGYLSFGHAAFLGVGSYSAVWMFKLLSYNVIPAIALSVVVAGLFSVLIGYISLRRSGI 123

Query: 121 YLAIATLIMSEIFQNILIKW-----KPITNGKAGIYVAD-----------RLYFLGTTVR 164
           Y +I TL  +++   +           +TNG+ G+ V                     + 
Sbjct: 124 YFSILTLAFAQMSFALAYSVLSNPKFNLTNGETGLQVYADDPQILQGANAPDLPHLFGLP 183

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
               +     ++       YY+   +  +   + + + R+      R ++ NQ+      
Sbjct: 184 MRATYTMDVGAWSFDFNAGYYLCAVIMMVVFYLAIRIFRSPFGMMLRAVKSNQQRMNYTG 243

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                  L+AF +S  + G+AG   AA       +  +++ +  V+ + ILGG  +L   
Sbjct: 244 LNSKPYTLAAFVISGMYAGLAGGLMAAMDPLAGAERMQWTASGEVVLMTILGGTGTLIGP 303

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLV 331
                 +     +   +N    +S   F                        + I   LV
Sbjct: 304 VLGAGFIKYFENIFSKINDNVLHSWFAFLPDGLEDAVVFIIHPFIGKGWHLTLGILFMLV 363

Query: 332 ILMRSHSLL 340
           ++     L+
Sbjct: 364 VIYLPGGLV 372


>gi|39936358|ref|NP_948634.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009]
 gi|39650213|emb|CAE28736.1| possible branched-chain amino acid ABC transporter, permease
           protein [Rhodopseudomonas palustris CGA009]
          Length = 407

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 64/349 (18%), Positives = 128/349 (36%), Gaps = 14/349 (4%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++       + LL     ++    +  T        +  +  IY +FA G +I+ G  G 
Sbjct: 1   MKHTSKLADIALLIGFAIVVALGPIIFTPIGAGYPDLLQKFAIYGIFAIGFNILFGLTGY 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           LS        +G+Y+ V       + +   + +S +++G   + +G  SL+  G Y +I 
Sbjct: 61  LSFGHAAFLGVGSYAAVWSFKLLSMDLLPAVAMSVVLAGLLALAIGFVSLRRSGIYFSIL 120

Query: 126 TLIMSEIFQNILIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           TL  +++  N+      PITNG+ G+ V  +           +          I     +
Sbjct: 121 TLAFAQMCYNMAYSVLTPITNGETGLRVLRQDPRYLDAAIGYVSPTPSLFGMQITGWTGF 180

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y+   +   +  + + + R+      R I+ NQ        +     LSAF +S  F G+
Sbjct: 181 YICGAVLVAAFGLSIAIFRSPFGMTLRAIKSNQNRMGYTGYSTRPYLLSAFVISGMFAGL 240

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA  AA+      +  +++ +  V+ + ILGG  +L      T I+     +    N  
Sbjct: 241 AGALLAATDPLAGAERMQWTASGEVVLMTILGGAGTLLGPVLGTGIIKYFENIFSAYNEA 300

Query: 305 YFNSLLKF-------------DCSFNMRHTTLMVIALFLVILMRSHSLL 340
              ++  F                        + +    V++     ++
Sbjct: 301 QLKAMFTFVPDGLREPVVKTLGLFVGEGWQLTLGLLFMAVVIFLPGGVM 349


>gi|256026673|ref|ZP_05440507.1| branched chain amino acid ABC transporter permease [Fusobacterium
           sp. D11]
 gi|289764670|ref|ZP_06524048.1| branched-chain amino acid transport system permease livM
           [Fusobacterium sp. D11]
 gi|289716225|gb|EFD80237.1| branched-chain amino acid transport system permease livM
           [Fusobacterium sp. D11]
          Length = 324

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 76/340 (22%), Positives = 141/340 (41%), Gaps = 45/340 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             I  +L +V   +LF  + +    +Y   + I ILI V+ A  L+I VG LG ++L   
Sbjct: 9   YIITYVLLIVLYFILFSLISSGFISRYQVGILILILINVILAASLNITVGCLGQITLGHA 68

Query: 72  IAYAIGAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
              +IGAY+  +L             + + +  +++G  G I+G+P+L+  GDYLAI TL
Sbjct: 69  GFMSIGAYTAALLTKSGFLSGYPGYIVALIIGGLVAGVIGFIIGIPALRLTGDYLAIITL 128

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              EI + +LI++   T G  G+    R+                             ++
Sbjct: 129 AFGEIIR-VLIEYFKFTGGAQGLTGIPRVNNFT-------------------------LI 162

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +   S   +  +  +    A   IR+++ A  +      + K  AF +S+ F G+AG 
Sbjct: 163 YVITIFSVIFMYSIMTSRHGRAVLAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGG 222

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A +   +    F ++ +I ++ +V+LGGM S +    +  +L  + E+      Y   
Sbjct: 223 IYAHNLGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAVVLTILPEVLRSFAEY--- 279

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  + L +++L R   LL  +    
Sbjct: 280 ------------RMIVYPLILIIMMLFRPQGLLGRKEFQI 307


>gi|326804267|ref|YP_004322085.1| branched-chain amino acid ABC transporter, permease protein
           [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651704|gb|AEA01887.1| branched-chain amino acid ABC transporter, permease protein
           [Aerococcus urinae ACS-120-V-Col10a]
          Length = 335

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 76/345 (22%), Positives = 138/345 (40%), Gaps = 43/345 (12%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F+    K       + V+  +L+     A     Y  ++ + I I ++ + GL++VVG  
Sbjct: 9   FNQFFTKTTLAWIAVIVLGFVLMAASYMAGLVSAYTQNIIMNIAINIILSVGLNLVVGYA 68

Query: 64  GLLSLNCVIAYAIGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           G  SL      AIGAY   I+             +     ++    +I+G+P+L+ RGDY
Sbjct: 69  GQFSLGHAGFMAIGAYVGAIVSQEIPGQAGFLAGLLAGMAVTAVVALIVGIPTLRLRGDY 128

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LAIATL +SEI +  ++  + ITNG AGI    R                          
Sbjct: 129 LAIATLGVSEIIRITIMNLE-ITNGAAGISGVPRH------------------------- 162

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +  +     ++  +++    ++   A   +R+++ A  S+       K  AF + +  
Sbjct: 163 VTWITMYVFVVITTLLVVNYIYSSPGRATIAVREDEIAAESVGIHTTTYKTLAFVIGAVT 222

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
             +AG  +A+    I+P  F F ++I ++ IV+ GG+ S+S    A+ +L  +       
Sbjct: 223 ASIAGTLYASYFGVINPSQFTFQKSIDILVIVVFGGIGSISGSFVASILLGLLNTFLA-- 280

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                         F      L   AL L+++ +   L+      
Sbjct: 281 -------------PFGQVRPILYAAALILIMIFKPSGLMGEYEFQ 312


>gi|283797882|ref|ZP_06347035.1| high-affinity branched-chain amino acid transport protein
           [Clostridium sp. M62/1]
 gi|291074572|gb|EFE11936.1| high-affinity branched-chain amino acid transport protein
           [Clostridium sp. M62/1]
          Length = 369

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 71/339 (20%), Positives = 137/339 (40%), Gaps = 31/339 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
           + +   + +   +L+ +          +  + + +  YV+ A  L++ VG LG LSL   
Sbjct: 17  NAVTYGIVLACFILVQILTATGGMTSLLKGILVPLCTYVILAVSLNLTVGILGELSLGHA 76

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG--------------MIMGLPSLKF 117
               +GA+S     +    +  +       I G                 +++G+P L+ 
Sbjct: 77  GFMCVGAFSGAFFTNAMMKTFGIAKNDDMAILGLFIVAIVIGAAVAAVFGILIGIPVLRL 136

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           +GDYLAI TL   EI +N++       + +   +       L       +          
Sbjct: 137 KGDYLAIVTLAFGEIIKNLINALFVGIDSRGIHFSLKDAASLNLEEGGEVIIKGAQGISG 196

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
             +   + + + +  L+  I+  L  +    A   IRDN+ A  S+   I   KL AF+V
Sbjct: 197 TPKAATFTIGIILVLLTLFIVQNLIHSRTGRAIMAIRDNRIAAESVGINITKYKLLAFSV 256

Query: 238 SSAFIGMAGAFFAASRDR--ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
           S+A  G+AG  +A +      +P  F ++ +I+++  V+LGG+ ++     A  IL  + 
Sbjct: 257 SAALAGVAGVLYAHNLATLAATPKAFGYNMSIMILVFVVLGGIGNIRGSIIAAVILTLLP 316

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           EL  G++ Y                  +  I L +++L+
Sbjct: 317 ELLRGLSSY---------------RMLIYAIVLIVMMLL 340


>gi|146338135|ref|YP_001203183.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. ORS278]
 gi|146190941|emb|CAL74946.1| Putative Branched-chain amino acid ABC transporter (permease
           protein) [Bradyrhizobium sp. ORS278]
          Length = 520

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 91/297 (30%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++          L   S +I+     ++ 
Sbjct: 241 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQEVIRTRYPALFDYSLLIAAPLAFLVA 300

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       I   +     + +L  W      +  +  A           S      
Sbjct: 301 GAIGVLIER--TIIRFLYGRPLETLLATWGLSLILQQAVRSAFGPTNREVGNPSW-MSGA 357

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++L     + A ++  LR TA+    R +  N++   S+        
Sbjct: 358 FELGQITITYNRLWILCFTMAVFAILLAMLRYTALGLEMRAVTQNRRMAASMGIATSRVD 417

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   A S+          S  I    +V+ GG+ +L         L
Sbjct: 418 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFTL 475

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +    +                      +++ + L I  R   L  L+  +  
Sbjct: 476 GIANKFLEPVAGAVLGK-------------IAILVLIILFIQKRPRGLFALKGRAVE 519


>gi|117924327|ref|YP_864944.1| inner-membrane translocator [Magnetococcus sp. MC-1]
 gi|117608083|gb|ABK43538.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Magnetococcus sp. MC-1]
          Length = 548

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 101/306 (33%), Gaps = 17/306 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++ A GL+I  G +G++++       +GAY+  ++   +   +   +  S ++
Sbjct: 259 ISLGSVLLLAAVGLAITFGVMGVINMAHGELVMLGAYTTFVVQDLFRAYLPDWLDWSLLV 318

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++             I   +     + +L  W      +  +           +
Sbjct: 319 AVPMAFLVSGLFGVAIER--GIIRFLYGRPLETLLATWGLSLMLQQLVRTLFGPTNQEVS 376

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             S +      S  ++       ++L    +  S+ L LR+T++    R +  N++   S
Sbjct: 377 NPSWMSGAIQTSQGLVLTYNRITIILFSLAVIGSLALVLRKTSLGLQMRAVTQNRRMAGS 436

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +     +     F + +   G+AG   +   +         S  I    +V+ GG+ +L 
Sbjct: 437 MGIRTGWVDALTFGLGAGIAGIAGVALSQVDNV--SPNLGQSYIIDSFMVVVFGGVGNLW 494

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   L  + +    +                     L+++ + L I  R   L  L
Sbjct: 495 GTLVGAFSLGVLNKFMEPLAGAVLGK-------------ILVLVGIILFIQKRPRGLFAL 541

Query: 343 RTPSNF 348
           +  +  
Sbjct: 542 KGRAVE 547


>gi|319763584|ref|YP_004127521.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|330824150|ref|YP_004387453.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317118145|gb|ADV00634.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|329309522|gb|AEB83937.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 324

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 59/324 (18%), Positives = 126/324 (38%), Gaps = 28/324 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
                 L   L         Y  ++     I+ +   GL+++ G  G L+L      A G
Sbjct: 9   AGWGLLLAASLAFPWVAGNDYHLTVMSTAYIFAIATLGLNLITGYTGQLNLAHAGFMAAG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL   +G   W  + +S ++    G ++G+ SL+ +G Y +I TL +  I   ++
Sbjct: 69  AYTVGILTVDHGWPFWGSLVMSGVVCMVLGYLIGVVSLRLKGHYFSIFTLCVGYIMFLVI 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  GI                       +      + +YY++L    LS   
Sbjct: 129 EKWEGLTHGTVGIMGIPAPE-------------AIGALSFESPLALYYLVLAFLVLSVWA 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  + ++ +   +  IR++ +   +L   ++  K+ AF +S  + G+AG  +A     I 
Sbjct: 176 MQRIVKSLLGRTFIAIRNSDELAEALGINLMRNKVLAFMLSVVYAGVAGGLYAGFVRFIG 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           PDM        ++   + GG+ ++      +  +  + +    +  Y             
Sbjct: 236 PDMAGVHHTFDMMIFAMAGGLGTVLGPLLGSIGMPWLTQYLQFLQEY------------- 282

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                +    L ++++   + ++ 
Sbjct: 283 --RFIVFGPILVMLVIFMPYGVVG 304


>gi|167772555|ref|ZP_02444608.1| hypothetical protein ANACOL_03933 [Anaerotruncus colihominis DSM
           17241]
 gi|167665033|gb|EDS09163.1| hypothetical protein ANACOL_03933 [Anaerotruncus colihominis DSM
           17241]
          Length = 324

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 68/325 (20%), Positives = 137/325 (42%), Gaps = 29/325 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
            A+   L+  +    +    Y+  +  Q L+ ++   GL+ + G  G ++L       +G
Sbjct: 7   AALCLLLIFLVVFPLSYDNAYVHILLSQTLVNIVIVMGLNFITGLTGQMNLGTAGIMGLG 66

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  +  +R G+S W+   ++ ++  A G ++G PSL+ +G YL++ T+  SEI + IL
Sbjct: 67  AYTAALFSTRLGVSPWIGFLLAIVMGLAIGWMLGYPSLRLKGVYLSLTTIGFSEIVRLIL 126

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
             W  +T G  G+     +   G  + +  +              +YY+ L    L A  
Sbjct: 127 TNWVELTGGTMGVQGIPHISLFGYALDTSRK--------------VYYLYLAAVVLLAFT 172

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +  +     ++ IRDN +A  +    I   K+ AF +++ F  + GA +A     ++
Sbjct: 173 AWRIVHSKWGRVFKAIRDNVEAVEACGIDIAKIKIQAFTLATVFGCLGGAMYAYLMGYLN 232

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F    +   + ++++GG+ S+      TA++  + E    +   Y+           
Sbjct: 233 PTTFTTDLSANYLIMMMIGGIGSVPGNILGTAMITLLPECLRFLGTNYW----------- 281

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                   I   L  +   + L+ L
Sbjct: 282 ----LYFSIIALLFAIFLPNGLVSL 302


>gi|154243964|ref|YP_001414922.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154158049|gb|ABS65265.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 344

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 59/327 (18%), Positives = 123/327 (37%), Gaps = 19/327 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             L+  +   +  L L    +  Y+      +L +   A   + V G +G +SL      
Sbjct: 5   FTLILGLPLFVAALILPFVVADSYVVHSAAMVLYFAYMASSWNFVCGYVGQVSLGHAAFS 64

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I  Y+ V+L +  GLS W+ + +  +++ A  + +G  + + +G Y  + ++  +EI +
Sbjct: 65  GIAGYASVLLFTGLGLSPWIGMILGGLLAAAISVPVGYATFRLKGPYFTLTSIAFAEIMR 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L                  L          +    F +     ++  Y+++L M    
Sbjct: 125 IWLENTDEFLG--------IPLKGAQGLTVPPVGGTSFLAFQFDGKLPYYFIILAMLVGV 176

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    + R+ +    + IR N+    +L        L+A A+S+   G+ GA++A    
Sbjct: 177 MAATHVMERSRLGFYLKAIRGNRDGAEALGIDPTRYCLTALALSAFLTGLGGAYYAQLFR 236

Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
            I+P+       +I +  + I+GG  +L        +L  V E+   M   +        
Sbjct: 237 YINPERNMGIDLSIDMAVMTIVGGQGTLLGPTLGALVLHPVGEMVRAMLGGHVLG----- 291

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLL 340
                 H  +  + L L +L     ++
Sbjct: 292 -----LHLIIYGVVLMLAVLYFPKGII 313


>gi|257877546|ref|ZP_05657199.1| branched-chain amino acid transport system/permease component
           [Enterococcus casseliflavus EC20]
 gi|325568963|ref|ZP_08145256.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Enterococcus
           casseliflavus ATCC 12755]
 gi|257811712|gb|EEV40532.1| branched-chain amino acid transport system/permease component
           [Enterococcus casseliflavus EC20]
 gi|325158001|gb|EGC70157.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Enterococcus
           casseliflavus ATCC 12755]
          Length = 328

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 75/341 (21%), Positives = 144/341 (42%), Gaps = 42/341 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +Y+ I   LA +    LF          + D++ + I I ++ A  L++++G  G  SL 
Sbjct: 9   RYNLIWLALAAILYFGLFAAYNGGMINLFSDAIIVNIGINIILAVSLNLIIGFSGQFSLG 68

Query: 70  CVIAYAIGAYSYVI--LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I    +         + V  ++SGA  +++G+P+L+ +GDYLAIATL
Sbjct: 69  HAGFMAIGAYAGAILSASNPTFGGFLTGLLVGMLVSGAVALVVGIPTLRLKGDYLAIATL 128

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++EI + +L+  + +TNG AGI+   +                              ++
Sbjct: 129 GVAEIIRILLVNLRGLTNGPAGIFGLPQFSNWQ-------------------------IV 163

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                LS  ++     +    A   IR+++ A  S+       K+ AF + +    +AG 
Sbjct: 164 FLFAVLSILVVSNFIHSGPGRATLAIREDEIAAESMGVNTTKYKVIAFVMGAVMASIAGT 223

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A+ +  + P  + F ++I V+ IV+ GG+ S +    +  +L  +     G       
Sbjct: 224 LYASYQQSVFPRDYGFMKSIDVLIIVVFGGLGSTTGAVVSAVVLGILNMYLQGF------ 277

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                    +     +  +AL ++++ +   LL     S  
Sbjct: 278 ---------SDLRMIIYALALIIIMIFKPSGLLGTWEFSVK 309


>gi|83310771|ref|YP_421035.1| ABC-type branched-chain amino acid transport system
           [Magnetospirillum magneticum AMB-1]
 gi|82945612|dbj|BAE50476.1| ABC-type branched-chain amino acid transport system
           [Magnetospirillum magneticum AMB-1]
          Length = 315

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 69/332 (20%), Positives = 130/332 (39%), Gaps = 30/332 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +    ++        S  Y   +G+  +   +   GL++++G  G +SL     +A+GAY
Sbjct: 11  LAALAIVITLAPLGFSNSYFYDVGVNAMFNAILCVGLNLLIGYAGQISLGHAGFFALGAY 70

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              IL  RYG+     + +SA + G    ++  P LK +G YLA+ATL +  I   +L  
Sbjct: 71  GSGILTERYGVPAIGALVLSASVVGILAFVVARPILKLKGHYLAMATLGIGIIIHIVLKT 130

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              IT G  G+ + +      T     +                Y+V   +  L+  + L
Sbjct: 131 EAGITGGPDGMSLGNFKMLGFTIKGDQMW---------------YWVTGVLLVLAVWLSL 175

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  + +  A R +  ++     +       K+  F VS+ F  + G+ FA     I+PD
Sbjct: 176 NLIESPVGRALRAVHGSEVGAEVVGVDTSSYKVLVFVVSAVFASVVGSLFAHKNGFITPD 235

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  F  ++ ++++V+LGGM S+        IL  + ++   +  Y               
Sbjct: 236 ISSFFHSVELVTMVVLGGMASIYGALIGAVILTLLPQVLAAVEQY--------------- 280

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
              ++   +   ++     LL     S     
Sbjct: 281 EAMILGAIMMGTMIFMPKGLLPSLLASLKRRE 312


>gi|86748682|ref|YP_485178.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86571710|gb|ABD06267.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 357

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 66/343 (19%), Positives = 144/343 (41%), Gaps = 27/343 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           +IF  R ++   IL ++ + +               Y  S+ IQI I+ + A GL+I+VG
Sbjct: 21  TIFPTRTSRNAAILGIVLISFA--------PLVLSGYWLSVLIQIGIFGIAALGLNILVG 72

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G +S+     + +GAY+   L +   + ++  IP++ +I+   G++ GLP+ + +G Y
Sbjct: 73  FTGQISIGHAAFFLLGAYTSAYLNNNLPIPVFFTIPLAGVITALVGLVFGLPAARLKGLY 132

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           L IATL    I  +   + +  + G           F          F+      ++  +
Sbjct: 133 LVIATLAAQYILIDFFSRAEWFSGGSVPASANPFSLFGYMLRGDKQYFYVVLVYLLVSYL 192

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +                 L R+    A   +RD+  +   +   +   +  +F +++ F
Sbjct: 193 LVT---------------NLMRSRDGRALVAVRDHYLSAEIMGINLTKYRTLSFGLAAFF 237

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AGA +A  +  +S + F    +I+ ++++I+GG+ S+S     TA ++ + E    +
Sbjct: 238 AGIAGALYAHYQLVVSNEGFGIERSILFLAMIIIGGIGSISGTLMGTAFVVLLPEAMEWI 297

Query: 302 N----FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +        +  L+ + +        + + +   ++     L 
Sbjct: 298 SMELKGGVIDRALQLNNNLTFLREIAIGLIIIAFLVFEPDGLA 340


>gi|27378772|ref|NP_770301.1| ABC transporter ATP-binding/permease protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27351921|dbj|BAC48926.1| ABC transporter ATP-binding/permease protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 873

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 53/333 (15%), Positives = 117/333 (35%), Gaps = 34/333 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A V  L+L     A        S+  QI IY ++  G++++VG  GL+     + +   +
Sbjct: 41  AFVAALVLTALTAAWALLGAPISLITQIAIYTLYGAGVNLLVGYTGLVPFGASVFFGCAS 100

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+          +  + + ++ + S    +++G   L+ RG Y ++ TL  S+I   I  
Sbjct: 101 YAAAFFILGRYGNDLVSLLLATVFSALLALVVGAIILRRRGLYFSLLTLAFSQIAFEIAF 160

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           KW  +T G+ G+    R  F G                       +  ++ +  +   ++
Sbjct: 161 KWTGVTGGENGLQGVYRTSFAGPW-------------------SFHVFVVAVTVICIWLM 201

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +  +      + +RDN++   SL   +   +  A  ++  F+G  G       + +  
Sbjct: 202 WRIAHSPFGRVLQAVRDNEQRASSLGYNVHRFRHGALILTGTFVGFGGGLLTLMLEGVYA 261

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           +   +      + + +LGG+  +          I + +    +   ++            
Sbjct: 262 NNLSWQHAGDSLLMTVLGGVHHVLGPLWGAIAFILLEDRLSAITENWW------------ 309

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               +    L L  L     +  L       +R
Sbjct: 310 ---LVFAPILMLFALTSPEGMQGLWQRLFGRQR 339


>gi|86358915|ref|YP_470807.1| urea or short-chain amide ABC transporter, permease protein
           [Rhizobium etli CFN 42]
 gi|86283017|gb|ABC92080.1| probable urea or short-chain amide ABC transporter, permease
           protein [Rhizobium etli CFN 42]
          Length = 538

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 95/297 (31%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       IGAY+  ++      S   L   S   +     +  
Sbjct: 259 AAIGLAITFGVMGVINMAHGEMVMIGAYTTYVVQETIASSFPSLDDYSLAFAVPAAFLFT 318

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                      ++   +     + +L  W      +  I              S      
Sbjct: 319 GLVGLVIER--SVIRYLYGRPLETLLATWGVSLILQQAIRSYFGPTNREVRNPSW-MSGA 375

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    ++      ++++    +  ++++ L+R+A     R +  N++   S+     +  
Sbjct: 376 FDLGGLVITWNRLWIIVFSLAVFLTLLMLLKRSAFGLQMRAVTQNRRMASSMGIRTGWVD 435

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              FA+ S   GMAG   A S+          +  I    +V+ GG+ +L         L
Sbjct: 436 AFTFALGSGIAGMAGV--ALSQIDNVSPNLGQNYIIDSFMVVVFGGVGNLWGTLVGALSL 493

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             V +                          L+++ + L I  R   L  L+  +  
Sbjct: 494 GVVNKFLEPFAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 537


>gi|237745224|ref|ZP_04575705.1| branched chain amino acid ABC transporter permease [Fusobacterium
           sp. 7_1]
 gi|229432453|gb|EEO42665.1| branched chain amino acid ABC transporter permease [Fusobacterium
           sp. 7_1]
          Length = 324

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 75/340 (22%), Positives = 141/340 (41%), Gaps = 45/340 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             I  +L +V   +LF  + +    +Y   + I ILI ++ A  L+I VG LG ++L   
Sbjct: 9   YIITYVLLIVLYFILFSLISSGFISRYQVGILILILINIILAASLNITVGCLGQITLGHA 68

Query: 72  IAYAIGAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
              +IGAY+  +L             + + +  +++G  G I+G+P+L+  GDYLAI TL
Sbjct: 69  GFMSIGAYTAALLTKSGFLSGYPGYIVALIIGGLVAGVIGFIIGIPALRLTGDYLAIITL 128

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              EI + +LI++   T G  G+    R+                             ++
Sbjct: 129 AFGEIIR-VLIEYFKFTGGAQGLTGIPRVNNFT-------------------------LI 162

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +   S   +  +  +    A   IR+++ A  +      + K  AF +S+ F G+AG 
Sbjct: 163 YVITIFSVIFMYSIMTSRHGRAVLAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGG 222

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A +   +    F ++ +I ++ +V+LGGM S +    +  +L  + E+      Y   
Sbjct: 223 IYAHNLGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAIVLTILPEVLRSFAEY--- 279

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  + L +++L R   LL  +    
Sbjct: 280 ------------RMIVYPLILIIMMLFRPQGLLGRKEFQI 307


>gi|253700661|ref|YP_003021850.1| inner-membrane translocator [Geobacter sp. M21]
 gi|251775511|gb|ACT18092.1| inner-membrane translocator [Geobacter sp. M21]
          Length = 320

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 62/320 (19%), Positives = 130/320 (40%), Gaps = 29/320 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
               L+ L      S+ Y+ ++ + + +  + A GL++++G  G +SL     + +GAY 
Sbjct: 9   FVFCLVVLLAPLPLSESYLTNVLVFVGVNSILALGLNLLLGFAGQISLGQAAFFGLGAYG 68

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +L S Y  + W+ +   A+   A    +G P L+ +G YLA+ATL +  I      + 
Sbjct: 69  SGVLTSVYAFNPWVAMVAVALAVAAFAFAIGFPVLRLKGHYLAMATLGVGVIANIAFNET 128

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G +G+     L     +  + ++               YY++ G   +   + L 
Sbjct: 129 IDLTGGPSGLSGIPNLAIGTFSFDTDLKN--------------YYLVWGFALVMILLSLN 174

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  +      R I D++ A   +       K+  F +S+    +AG+ +      ISP  
Sbjct: 175 LVNSRFGRGLRAIHDSEVAARVMGVNARLMKVQVFTLSAFISAIAGSLYCHVMTFISPTS 234

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F F  ++ +++++++GG+ S+        +L  + E+    + Y                
Sbjct: 235 FSFHTSVELLTMIVIGGLGSVYGSILGALLLTMLPEILRTFHDY---------------D 279

Query: 321 TTLMVIALFLVILMRSHSLL 340
             +    L ++ +     L+
Sbjct: 280 IIVYGSLLVVMTIYMPGGLV 299


>gi|188591022|ref|YP_001795622.1| branched-chain amino acid ABC transporter permease [Cupriavidus
           taiwanensis LMG 19424]
 gi|170937916|emb|CAP62900.1| putative branched-chain amino acid transport system permease,
           membrane component [Cupriavidus taiwanensis LMG 19424]
          Length = 358

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 80/345 (23%), Positives = 144/345 (41%), Gaps = 23/345 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +R ++      +   V   + F+ +    S+ +  ++ I  LI+ + A GL+I+ G
Sbjct: 18  QIFPIRQDR------IGFAVLMAVAFVAIPFVGSEYWFSAILIPFLIFSLAALGLNILTG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-WLLIPVSAMISGACGMIMGLPSLKFRGD 120
             G LSL      A+GAY+      R       L   ++ + +   G+  GLPSL+ +G 
Sbjct: 72  YAGQLSLGTAAFMAVGAYAAYNFQLRIEGMPVLLTFILAGLSAALVGVAFGLPSLRIKGF 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL         L K+   +N  +   +  +   L                 +   
Sbjct: 132 YLAVATLAAQFFVVWALTKFPWFSNNSSSGVITAQRLDLFGY-------------AIDTP 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y  +L +  + A     L R+A   AW ++RD   A   +   ++  KL AFAVSS 
Sbjct: 179 VKKYLFVLAIVTVLALAAKNLVRSATGRAWMSVRDMDVAAEVIGIPLMRTKLLAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           + G+AGA +A      + PD F    +  V+ ++I+GG+ S+       A ++ +     
Sbjct: 239 YCGVAGALYAFCYLGSVEPDGFSLDLSFRVLFMIIIGGVGSILGSFLGAAFILLLPIFLD 298

Query: 300 GMNFYYFNSLLKFDCSFNMRH--TTLMVIALFLVILMRSHSLLRL 342
            +     + L     +  + H    +    +   +++  H L RL
Sbjct: 299 NVLPPLASLLHLPFTNATVSHIQLMVFGGLIIFFLIVEPHGLARL 343


>gi|297544137|ref|YP_003676439.1| inner-membrane translocator [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841912|gb|ADH60428.1| inner-membrane translocator [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 322

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 71/316 (22%), Positives = 128/316 (40%), Gaps = 41/316 (12%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               ++    I I I ++ A  L++VVG  G  S+      A+GAY+  I+   +     
Sbjct: 32  IISPFVMLNLIIIAINIILAVSLNLVVGFTGQFSIGHAGFMALGAYASAIMSLNFNAPFI 91

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + + V A+++G  G+I+G+P+L+ RGDYLAIATL ++EI + ++     +  G  G+   
Sbjct: 92  VSLLVGAIVAGIGGIIIGIPTLRLRGDYLAIATLGLAEIIRGVITNIDYL-GGAYGLMGI 150

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            +                            +    G   ++  +I    +++   A  ++
Sbjct: 151 PQRTN-------------------------WLWAFGCMLVTVLVIKNFIQSSHGRACISV 185

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R+N+ A  ++       K+ AF + S F G+ GA  A     I P+ F F ++  ++ +V
Sbjct: 186 RENEIASEAMGINTTKYKVIAFTMGSFFAGIGGALLAHYITFIEPNAFNFLKSFDILVMV 245

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG  SL+    A  +L  +      +                             V+L
Sbjct: 246 VLGGQGSLTGSVVAAIVLTLISTFLQSLAELRLIIYAIILIL---------------VML 290

Query: 334 MRSHSLLRLRTPSNFL 349
            R   LL     S  L
Sbjct: 291 FRPQGLLGTHELSFKL 306


>gi|310829095|ref|YP_003961452.1| branched-chain amino acid transporter permease livM [Eubacterium
           limosum KIST612]
 gi|308740829|gb|ADO38489.1| branched-chain amino acid transporter permease livM [Eubacterium
           limosum KIST612]
          Length = 335

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 75/349 (21%), Positives = 141/349 (40%), Gaps = 50/349 (14%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L K   +  +  +V   +++  +       Y   + I   I ++ A  L+IV G LG ++
Sbjct: 5   LKKSYIVNAISMIVIFAVIYSLVTFKIVTNYFGGIVILTCIMIIMATSLNIVAGFLGEMA 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGL---------SIWLLIPVSAMISGACGMIMGLPSLKFR 118
           L      AIGAY+   +                + +      + +G  G+++G PSL+ R
Sbjct: 65  LGHAGFMAIGAYTAASVSIAITNGNDSLPALLVLIIASLAGGVAAGIVGIVIGTPSLRLR 124

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           GDYL I T+  +EI +   + ++P T G  G+    R                       
Sbjct: 125 GDYLGIVTIGFAEIIRIFFVNFQP-TGGAQGLKGIPR----------------------- 160

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
             I     +  +  +   +I  L R+    A  +IR+++ A  +        K+ AF +S
Sbjct: 161 --IATLGYVYWIMIVVILLIFTLGRSKFGRAIMSIREDEIASEAAGIPTTKYKVMAFTIS 218

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           S F G+ G+ +A  +  + P+ F+F  +I +  IV+LGG+ S++    +  +L  + EL 
Sbjct: 219 SFFAGVGGSLYAHYQGYLDPNKFQFMFSIEIFVIVVLGGLGSVTGSILSAIVLTVLPELL 278

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
              + Y                  +  +AL ++++ R   +L     S 
Sbjct: 279 RQFSEY---------------RLLVYSLALVIMMIFRPQGMLGRYEFSL 312


>gi|192973018|gb|ACF06918.1| branched chain amino acid ABC transporter permease protein
           [uncultured Roseobacter sp.]
          Length = 358

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 74/344 (21%), Positives = 141/344 (40%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ ++Y     L         FL +    +  + +++ +  LIY + A GL+I+VG  
Sbjct: 20  FPIKFDRYRYYAVLA------FAFLVIPFIINDYWANAVLVPFLIYAIAAIGLNILVGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +   +SI + + +S  I+ A   + GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKLMTAFPEVSIMIHVVISGGITAAVVTVFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N                       F    +        
Sbjct: 134 AVATLAAQFFLVWLFNRVAWFYNYS---------ASGQINAPDRTVFGHLVTGPNTEAWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y + L    ++  +   + R A+   W  IRD   A   +    + AKLSAFA+S  FI
Sbjct: 185 KYMICLVFLTVAGILARNMTRGALGRKWSAIRDMDIAAEIIGVNPLTAKLSAFAISGFFI 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F +     +   ++F   ++ +V+ ++I+GG+ S+       A ++ +  L   
Sbjct: 245 GISGALFFSVYLGAAEVGEVFGIQKSFLVLFMIIIGGLGSIFGSFAGAAFMVLLPVLLKN 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +                     ++   + + ++   H L +L  
Sbjct: 305 VLVGGLGWDTALA---AHLEFVIVGALIIVFLIAEPHGLAQLWR 345


>gi|329901850|ref|ZP_08272937.1| Branched-chain amino acid transport system permease protein livM
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327548942|gb|EGF33559.1| Branched-chain amino acid transport system permease protein livM
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 346

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 81/322 (25%), Positives = 138/322 (42%), Gaps = 16/322 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A    LLL L      + +Y   +   + + ++   GL+++ G  GL+SL       +GA
Sbjct: 24  AWFGVLLLALVAFPFMANEYWLYLACLVGLNIVSTTGLNLLTGYTGLVSLGQAAFMGLGA 83

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL  RYG    L +    +++   G+++GLPSL+ +G YLAIAT+    +   +  
Sbjct: 84  YTVAILQVRYGSPFLLNLLAGGIVAMLGGILVGLPSLRVKGLYLAIATIAAGFMTHFLFA 143

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  IT G  G+ V                  R   + +     +Y+V+  +  L     
Sbjct: 144 HWASITGGNGGMTVPPA---------------RLFGAELDTSFRLYWVIAPIMILMVFGA 188

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L RT I  A+  IRD   +   L   ++  KL +FA+SS + G+AG  FA     ++P
Sbjct: 189 ANLFRTRIGRAFIAIRDRDISAAVLGIPLMPYKLMSFAISSFYAGVAGGLFAYFFRVVTP 248

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F    +I  ++ VI+GGM ++S        +  V EL   +   +           + 
Sbjct: 249 ESFPLLMSIFFLAAVIVGGMGTISGSIFGAIFMTLVPELLK-LIVGWLPLGDNATLVLSP 307

Query: 319 RHTTLMVIALFLVILMRSHSLL 340
             T +    + L ++   H L 
Sbjct: 308 VRTIVFGSMIVLFLIFEPHGLA 329


>gi|307689667|ref|ZP_07632113.1| inner-membrane translocator [Clostridium cellulovorans 743B]
          Length = 321

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 78/330 (23%), Positives = 139/330 (42%), Gaps = 42/330 (12%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+Y LL F  + +     Y   +    LI ++ A  L+++VG  G L L      +IGA
Sbjct: 20  IVIYFLL-FGLIKSKIISNYYAGIINLTLINIILAVSLNLIVGFTGQLCLGHAGFMSIGA 78

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y   ++  + G  + + I   A+++     ++G P+LK  GDY AI TL   EI + I++
Sbjct: 79  YVSAVITIKLGTPLVISIIAGAIVASIIAALIGYPTLKLTGDYFAITTLAFCEIIRIIIM 138

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                  G  G+                                   ++L    ++  +I
Sbjct: 139 -NIDFVGGARGLTGIPLKSN-------------------------LLIILIFMTITIIVI 172

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +  ++   A  ++R+++ A  S+       K+ AF +++ F G+AG  +A     I P
Sbjct: 173 YNIIHSSQGRAMLSVREDEIAAESMGIHSFKYKILAFIIAAFFAGIAGGLYAHYIGYIQP 232

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            +F F+++I  ++ V+ GGM SLS    AT +L  + EL   +N Y              
Sbjct: 233 TLFDFNKSIDYLTFVVFGGMGSLSGSVLATILLTFLPELLRDLNDY-------------- 278

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +  +AL L+++ R   LL  +  S  
Sbjct: 279 -RMIIYPLALILLMIFRPQGLLGNKEVSLK 307


>gi|260432031|ref|ZP_05786002.1| branched-chain amino acid ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415859|gb|EEX09118.1| branched-chain amino acid ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
          Length = 358

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 77/344 (22%), Positives = 140/344 (40%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ ++Y   + L       + F  +    +  + +++ +  LIY + A GL+I+VG  
Sbjct: 20  FPIKFDRYRYYVVLA------VAFGIIPFIINDYWANALLLPFLIYAIAAIGLNILVGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +   +S+++ + ++  I+   G++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKLMTAFPDVSMFIHVILAGGITAIVGVLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N                       F    +        
Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGQINAPERDVFGIIITGPNAPAWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L      A I   L R      W  IRD   A   +    + AKLSAFAVSS F+
Sbjct: 185 TYLFCLIFLTACAIIARNLTRGTTGRTWMAIRDMDIAAEIIGVNPLRAKLSAFAVSSFFV 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F A         + F   ++ +V+ +VI+GG+ S+       A L+ +  +   
Sbjct: 245 GVSGALFFAIYLGAVEVGEAFGIQKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVVLKV 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +                     ++   + L +++  H L +L  
Sbjct: 305 VGADMLGWPTDI---VAHLQLVIVGGLIILFLILEPHGLAQLWR 345


>gi|254503092|ref|ZP_05115243.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222439163|gb|EEE45842.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 320

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 69/320 (21%), Positives = 124/320 (38%), Gaps = 26/320 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR---- 87
                 Y   M I I IY +   GL+I  G  GL +      +A+GAY+  IL +     
Sbjct: 3   FLGLVNYALFMAIFIAIYALLVLGLNIQWGFAGLFNAGIAGFFAVGAYTSAILTTEAADG 62

Query: 88  ----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
               + L   +    + + +      +G   L+FR DYLAIA++ ++EI + ++     +
Sbjct: 63  RIGGFDLHFVIGWIGAMIAAALVAWPIGKICLRFRSDYLAIASIGIAEIIRLVIKSEPAL 122

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
           TNG  GI    R                    ++  ++    ++L +   +  ++     
Sbjct: 123 TNGARGIPGIPRPMS--------------DIGYMESQVAYLIIVLAVLIAAYVLVERQFN 168

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
                  R IRDN+ A  ++   + F +L AF   +A +G+ GA FA     I+P+    
Sbjct: 169 APWGRMMRAIRDNEDAAKAMGKDVEFRRLEAFIFGAALMGLGGALFAHFNRSITPEAIDP 228

Query: 264 SE-NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                +V  ++ILGG  +        A++  +  +             ++          
Sbjct: 229 MVATFLVWIMLILGGSGNNRGAILGAAVVWIIWSVSEIATD---RLPHEYAIQAKYIRLF 285

Query: 323 LMVIALFLVILMRSHSLLRL 342
           L+ + L LV+  R   LL  
Sbjct: 286 LIGLMLQLVLRFRPEGLLPE 305


>gi|118592870|ref|ZP_01550259.1| ABC transporter, permease protein [Stappia aggregata IAM 12614]
 gi|118434640|gb|EAV41292.1| ABC transporter, permease protein [Stappia aggregata IAM 12614]
          Length = 331

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 68/314 (21%), Positives = 130/314 (41%), Gaps = 22/314 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL------ 90
            Y        L Y +   GL++  G  GL ++      A+GAY+  +L + + +      
Sbjct: 7   SYGAFFLTMALSYAVICLGLNVQWGQTGLFNVGVAGFVAVGAYTSALLTTPFIVDRIGGF 66

Query: 91  --SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
              I +      +++G     +GL +L+ R DYLAIAT   + + Q +L+    +T G  
Sbjct: 67  GLPIVIGWLGGGLVAGLLSAALGLLTLRLRSDYLAIATFGAAVMIQLVLLNLVGLTGGPF 126

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           GI    R             F  F  +  ++      V+  +  ++  ++  L R+    
Sbjct: 127 GIGFIPRP------------FGEFAENTDLFSFANLAVMAALVSVTYLVLEHLVRSPWGR 174

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
             R IR+++ A   L       +L AFA+    +G+ GA  A     I+PD +  +    
Sbjct: 175 VLRAIREDETAARGLGKNPESYRLQAFAIGGFVMGLGGAAQAHFIGFIAPDNYLPTLTFQ 234

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           V +++I+GG  ++        ++ G+  +   +    F +  +     +     L+ IAL
Sbjct: 235 VWTMLIIGGSGNMRGAILGGVLVWGIWAVSGNIVSQLFPASEQ--ARASSLQIVLIGIAL 292

Query: 329 FLVILMRSHSLLRL 342
            +V+L+R   +L  
Sbjct: 293 CVVLLVRPRGILGE 306


>gi|90417952|ref|ZP_01225864.1| ABC type amino acid transporter [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337624|gb|EAS51275.1| ABC type amino acid transporter [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 576

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 51/320 (15%), Positives = 108/320 (33%), Gaps = 39/320 (12%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +         Y+ ++ I+ L   + A  + +V G  G+L+      + IGAY+  ++ + 
Sbjct: 1   MATAPLYLDTYMTNVLIRALFLGVLALTVDLVWGYTGVLTFGQSAFFGIGAYACALVATH 60

Query: 88  YGL---SIWLLIPVSAMISGACGMIMGLPSLKF--RGDYLAIATLIMSEIFQNILIKWKP 142
           +G       L + +  + +     ++GL S        Y +I TL +  +   I+     
Sbjct: 61  WGFGPGWFALALVIGIVAAAVTAWLVGLLSFYHGASPLYSSIMTLALPIVLVQIIFAGGR 120

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
            T   +G+      Y+   T                     + +   +    A++     
Sbjct: 121 FTGSSSGLSGFPTYYWSIDTW--------------------FVIAGILLVAVATVAWLFV 160

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+        IR+N+     L   +   K+  F    A   +AG  +AA  + ++P++  
Sbjct: 161 RSDYGCILVAIRENEDRCAYLGIPVSRIKIGLFVACGAIGAVAGFGYAAFTNVVAPELGG 220

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F      +  V LGG  +L         +        G   + +                
Sbjct: 221 FLLGTESLIWVALGGRGTLLGPILGAIGIDVTSSYLSGSLPFLWK--------------F 266

Query: 323 LMVIALFLVILMRSHSLLRL 342
           ++ +   LVI++  +    L
Sbjct: 267 IVGVVFVLVIILLPNGFASL 286


>gi|283850453|ref|ZP_06367741.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
 gi|283574024|gb|EFC21996.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
          Length = 346

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 59/322 (18%), Positives = 119/322 (36%), Gaps = 20/322 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V   L    L           + I +  Y       ++V G  G+L L   +   IGA
Sbjct: 10  LLVLAGLAAFALPLVVKSPTYLQILILLFFYAYLTTAWNLVGGFAGVLPLGHSLFVGIGA 69

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL  +YG+S W+ +    +++   G+I+GLP+ + RG Y  + T+  +E  + ++ 
Sbjct: 70  YTSTILTLQYGISPWIGMLAGGLLAALFGVIIGLPTFRMRGAYFCLCTIAFAEGIRVMVE 129

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +                   +   ++   F +   + +   YY++L +  L  ++ 
Sbjct: 130 NIDNL---------GPLHINGPRGLLIPLKDASFWNYQFMSKEPYYYIILTLLVLVLALT 180

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRIS 257
             + R+ I        +  +A  +L   +   KL + A+S     +AG F+A        
Sbjct: 181 WCISRSKIGYYLAAGGEEPEAAAALGINVANCKLLSMALSCFLTALAGTFYAQLMLYFYP 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +     +  +  I ++GG  +++       +L  V E                     
Sbjct: 241 KGLMGLDLSFEIAFIALIGGRGTIAGPVIGALVLRPVNEFTRIYLSDMLPG--------- 291

Query: 318 MRHTTLMVIALFLVILMRSHSL 339
             H  +  + L LV+L +   L
Sbjct: 292 -LHLVIFGLILILVMLYKPQGL 312


>gi|157363983|ref|YP_001470750.1| inner-membrane translocator [Thermotoga lettingae TMO]
 gi|157314587|gb|ABV33686.1| inner-membrane translocator [Thermotoga lettingae TMO]
          Length = 322

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 57/323 (17%), Positives = 117/323 (36%), Gaps = 24/323 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +   L  F  L           + I +L++       +I+ G  G  S      + IGAY
Sbjct: 6   LYVILTAFFLLPLIIPDVNFQHIMIMLLLFAGLGESWNIITGFAGQTSFGHAAFFGIGAY 65

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  +L  ++G+S W+ +   ++I+     ++  P  K +G Y AIATL ++EI + + + 
Sbjct: 66  TSTVLFYKFGISPWVGMISGSIIAAVIAFLVSYPCFKLKGHYFAIATLAVAEIIKQLFVS 125

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W  +              F      +              +I    ++  +  LS    +
Sbjct: 126 WDYVEGATGISIPVVDNSFWLMQFHN-------------SKIPYILIVYALFCLSLFAAI 172

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            + +       + IR++ +A  +L       KL A   S+A   + G  +A     I P 
Sbjct: 173 TIEKNKTGYYLKAIRESHEAAEALGINTTRYKLFAMITSAALTSLFGTLYAQYILYIDPF 232

Query: 260 M-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           M F    ++ ++ + +LGG+ ++       +ILI + E            +         
Sbjct: 233 MVFSLEISMKIVLLTVLGGLGNVYGPIIGASILIPLSEYTRNYLGGTGKGI--------- 283

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
               +    + L+       ++ 
Sbjct: 284 -DLMIYGALIILIACFEPQGVIG 305


>gi|317405193|gb|EFV85532.1| high-affinity branched-chain amino acid transport system permease
           [Achromobacter xylosoxidans C54]
          Length = 345

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 71/310 (22%), Positives = 131/310 (42%), Gaps = 17/310 (5%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +  Y   +   + I V  A GL+I+ G  GL+SL       +GAY+  ++  R G 
Sbjct: 36  FPFVADAYWLYLACLVAINVASATGLNILTGYTGLVSLGQAAFMGLGAYTVAVMELRLGT 95

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + L +  + +++   G+++G+PSL+ +G YLAI+T+  S I   +   W   T G  G+
Sbjct: 96  PVLLNLLGAGVVAMLGGLLVGIPSLRVKGLYLAISTIAASFIAHFVFANWA-FTGGTGGL 154

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            V                  R     +     +Y++++ +  L       L RT I  A+
Sbjct: 155 QVPPA---------------RLLGIDLDTSFKIYWLIVPLTALMVLGAANLFRTRIGRAF 199

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             IRD   +   L   ++  KL +F +SS + G+AG  +A     ++P+ F    +I  +
Sbjct: 200 IAIRDRDISAEVLGIHLLRYKLLSFGLSSFYAGVAGGLWAYFFRVVTPESFPLIMSIFFL 259

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           + +I+GGM S+         +  V EL   +   +           +   T +  + +  
Sbjct: 260 AAIIVGGMGSILGSILGAVFMTMVPELLK-LVVGWLPVGGDALRLISPVRTIVFGLLIVG 318

Query: 331 VILMRSHSLL 340
            ++   H L 
Sbjct: 319 FLIFEPHGLA 328


>gi|288572907|ref|ZP_06391264.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288568648|gb|EFC90205.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 350

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 54/320 (16%), Positives = 106/320 (33%), Gaps = 7/320 (2%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
           +        Y   +   I IY +    L+++ G  G+ SL       IGAY   +L    
Sbjct: 25  WWAPENLDGYKIQILNLIAIYSILGLSLNLIYGFTGMFSLGTAGFMCIGAYVSSLLILPE 84

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
                + I     ++           +      +A A   +      + +    +     
Sbjct: 85  MQKDMIFILEP--LNPILYGAHAPFVVAVLAGGVAAAIAGLIIGIPVLRLGGDYLGIATL 142

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G     R+        +            I      +   G  F +  ++  L  +   N
Sbjct: 143 GFAEIIRVVANNIPTITN----GALGLKGIPAYANLWWNYGWMFFTLYVMYRLVNSNFGN 198

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           A + IRD++ A  ++       ++ +F V S F G+ GA  A+    I P MF       
Sbjct: 199 ALKAIRDDELAAKAMGINTFKYRVISFTVGSFFAGIGGALMASLLTTIDPKMFMVIMTYN 258

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           V+ +V+ GG+ SLS       ++  ++E    +         +           +  ++L
Sbjct: 259 VLMVVVAGGLGSLSGSVIGAVVVTVLLEWLRFVENPITLGSFEIP-GVPGMRMVIFALSL 317

Query: 329 FLVILMRSHSLLRLRTPSNF 348
            ++IL R   ++  +  S  
Sbjct: 318 IMIILYRPEGVMGNKELSWE 337


>gi|302342738|ref|YP_003807267.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075]
 gi|301639351|gb|ADK84673.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075]
          Length = 346

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 63/347 (18%), Positives = 123/347 (35%), Gaps = 19/347 (5%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
            + KY   + + A +  ++    +GA     Y+ S+ + + I V+ A  L++V G +G  
Sbjct: 9   PMQKYSLNMAMAAALVGVVALAQVGAI--DLYVQSVLMFMAINVIMASSLNLVNGFMGEF 66

Query: 67  SLNCVIAYAIGAYSYVI--LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           S        +GAY   +  +       ++    +    + A   ++ L           I
Sbjct: 67  SCGHGGFMCVGAYVGSVLSMMLFTDSHLYGAALLPPQWAVALFPLVLLGGGAAAALAGVI 126

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
             +   +   + L       N      V +     G    + +R        V+   +M 
Sbjct: 127 VAVPSFKTRGDYLAIITLAVNYIVISAVHNLDIVGGPRGLTGMRPTIMAMGQVVDLPWMM 186

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +L        II     +        I  ++ A   ++      KL  F VSS   G+
Sbjct: 187 IWVLVGATGCLFIIRRYVNSTYGKGVIAISQDEIAAEIMSVNTNRLKLITFMVSSGLAGV 246

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA +A     ++P  F   ++   + +V LGGM SLS    A  +   ++E+   +  Y
Sbjct: 247 AGALYAHVVGYLNPGAFDILKSTEAMVMVYLGGMGSLSGSVIAAVLFTLLLEVLRPLQIY 306

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            +                ++ + L L++  R   L+  +  S+   R
Sbjct: 307 KW---------------VIVPLILILLMQFRPEGLMGDKELSDIFPR 338


>gi|89093717|ref|ZP_01166664.1| putative ureashort-chain amide or branched-chain amino acid uptake
           ABC transporter permease protein, possibly fusion
           [Oceanospirillum sp. MED92]
 gi|89082113|gb|EAR61338.1| putative ureashort-chain amide or branched-chain amino acid uptake
           ABC transporter permease protein, possibly fusion
           [Oceanospirillum sp. MED92]
          Length = 533

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 98/297 (32%), Gaps = 21/297 (7%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++      +I   + V+   +     ++G
Sbjct: 258 AAIGLAITFGVMGVINMAHGEMIMLGAYTTYVVQLLMPDAIEYSLLVAVPAAFVVSGLVG 317

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           +   +    +L    L      + +L  +      +  +                +    
Sbjct: 318 ILIERGVIRFLHGRPL------ETLLATFGISLILQQLVRTVFSPLNRQVESPLWMSGSL 371

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
             +  +   +   Y+L     +   +++ LR+T++    R +  N+    ++     +  
Sbjct: 372 EINPVLSLTLNRLYILAFALLVFGLLLIILRKTSLGLNVRAVSQNRSMAKAMGIRTDWVD 431

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   +   +         S  I    +V+ GG+ +L     A   L
Sbjct: 432 AMTFGLGSGIAGIAGVALSQLTNV--GPNLGQSYIIDSFMVVVFGGVGNLWGTLVAAFSL 489

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +    +      S              L+++ + L I  +   L   +  +  
Sbjct: 490 GVANKFLEPVTGAVLAS-------------ILVLVFIILFIQKKPKGLFPQKGRAAE 533


>gi|160939123|ref|ZP_02086474.1| hypothetical protein CLOBOL_04017 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438086|gb|EDP15846.1| hypothetical protein CLOBOL_04017 [Clostridium bolteae ATCC
           BAA-613]
          Length = 357

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 76/329 (23%), Positives = 141/329 (42%), Gaps = 23/329 (6%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + V   +++ + +G       +  + +   IYV+ A  L++ VG LG LSL     
Sbjct: 15  ITYGMVVAAYIIMQVLVGTGHISSLMKGLLVPFCIYVIMAVSLNLTVGILGELSLGHAGF 74

Query: 74  YAIGAYSYVIL------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
             +GA++  +            L + + I + A+ +   G+I+G+P L+ RGDYLAI TL
Sbjct: 75  MCVGAFAGALFSKCMKGAIDPTLGMVIAILIGAVTAALFGVIIGIPVLRLRGDYLAIVTL 134

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              EI +N++       +             L       I            +   + + 
Sbjct: 135 AFGEIIKNLVNAVYLGRDASGFHISFKDSMSLKLGEGGEILIKGAQGITGTPQAATFTIG 194

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +  ++  I++ L  +    A   IRDN+ A  S+   I   KL AF++S+   G+AG 
Sbjct: 195 VILVLITLFIVMNLVNSRTGRAIMAIRDNRIAAESIGINITKYKLLAFSISAGLAGIAGV 254

Query: 248 FFAASRDRIS--PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
            +A +   ++  P  F ++ +I+++  V+LGG+ ++     AT IL  + E+  G++ Y 
Sbjct: 255 LYAHNLTTLTALPKNFGYNMSIMILVYVVLGGIGNIRGSVIATVILYLLPEMLRGLSNY- 313

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILM 334
                            +  I L L +L 
Sbjct: 314 --------------RMLMYAIVLILAMLF 328


>gi|159185205|ref|NP_355365.2| ABC transporter, membrane spanning protein (urea/amide)
           [Agrobacterium tumefaciens str. C58]
 gi|159140469|gb|AAK88150.2| ABC transporter, membrane spanning protein (urea/amide)
           [Agrobacterium tumefaciens str. C58]
          Length = 537

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 95/297 (31%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       IGAYS  ++          L   S  I+     ++ 
Sbjct: 258 AAIGLAITFGVMGIINMAHGEMVMIGAYSTFMVQEVIRSHFPGLFDWSLAIALPVAFLVT 317

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       +   +     + +L  W      + G+                     
Sbjct: 318 GFVGLVMER--GVIRFLYGRPLETLLATWGISLMLQQGVRSIFGPTNREVGSPGW-MSGS 374

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F   ++ +     +++     +  ++++ L+R+A     R +  N++   S+     +  
Sbjct: 375 FSVGYLNFTWNRVWIVCFSLSVFFALLVLLKRSAFGLQMRAVTQNRRMASSMGIRTPWVD 434

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              FA+ S   G+AG   A S+          S  I    +V+ GG+ +L         L
Sbjct: 435 AFTFALGSGVAGLAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGALSL 492

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             + +                          L+++ + L I  R   L  L+  +  
Sbjct: 493 GVLNKFLEPTVGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAIE 536


>gi|257867467|ref|ZP_05647120.1| branched-chain amino acid transport system/permease component
           [Enterococcus casseliflavus EC30]
 gi|257873796|ref|ZP_05653449.1| hydrophobic amino acid uptake family ABC transporter [Enterococcus
           casseliflavus EC10]
 gi|257801523|gb|EEV30453.1| branched-chain amino acid transport system/permease component
           [Enterococcus casseliflavus EC30]
 gi|257807960|gb|EEV36782.1| hydrophobic amino acid uptake family ABC transporter [Enterococcus
           casseliflavus EC10]
          Length = 325

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 75/341 (21%), Positives = 144/341 (42%), Gaps = 42/341 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +Y+ I   LA +    LF          + D++ + I I ++ A  L++++G  G  SL 
Sbjct: 6   RYNLIWLALAAILYFGLFAAYNGGMINLFSDAIIVNIGINIILAVSLNLIIGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVI--LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I    +         + V  ++SGA  +++G+P+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYAGAILSASNPTFGGFLTGLLVGMLVSGAVALVVGIPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++EI + +L+  + +TNG AGI+   +                              ++
Sbjct: 126 GVAEIIRILLVNLRGLTNGPAGIFGLPQFSNWQ-------------------------IV 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                LS  ++     +    A   IR+++ A  S+       K+ AF + +    +AG 
Sbjct: 161 FLFAVLSILVVSNFIHSGPGRATLAIREDEIAAESMGVNTTKYKVIAFVMGAVMASIAGT 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A+ +  + P  + F ++I V+ IV+ GG+ S +    +  +L  +     G       
Sbjct: 221 LYASYQQSVFPRDYGFMKSIDVLIIVVFGGLGSTTGAVVSAVVLGILNMYLQGF------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                    +     +  +AL ++++ +   LL     S  
Sbjct: 275 ---------SDLRMIIYALALIIIMIFKPSGLLGTWEFSVK 306


>gi|291004015|ref|ZP_06561988.1| amino acid ABC transporter permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 351

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 63/326 (19%), Positives = 120/326 (36%), Gaps = 27/326 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++ ++    L +   +     +I S+G+ I  Y + A   + V G  G +SL       +
Sbjct: 10  VIGLLALAALVIAFPSLAPDPFILSVGVVITSYAVLATSWNFVGGFTGYISLGHAAYSGL 69

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +L  R G   W+ +    ++     + +G+ SL+ RG    I ++ +  I   +
Sbjct: 70  GAYATGLLIVRAGFDPWVALFAGGVLVALLAVPIGIASLRVRGASFVIVSIALVLITLLV 129

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
              W   T G  G+ V               RFF   ++ +   +  ++V+         
Sbjct: 130 FQSWGDFTGGSDGLRVPRPFGPDVMRPEQHERFFYLHAALLAVALLCWWVI--------- 180

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
                 R+      + IR+++    SL       KL AF VS+ F  +AG  +A     +
Sbjct: 181 -----DRSRFGAGLKAIREDEDKAQSLGVPTFAYKLVAFVVSAFFTALAGGLYALWFGFL 235

Query: 257 SP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            P   F       ++ + +LGG+ SL        ++   +E                   
Sbjct: 236 DPVFQFSILAGSYLVLMSLLGGIRSLFGPVLGAVVVGYAMEYFKA------------QYG 283

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
               H   M + L +V+L     ++ 
Sbjct: 284 DTQLHLVAMGVLLAVVVLFMPDGIIP 309


>gi|222055889|ref|YP_002538251.1| inner-membrane translocator [Geobacter sp. FRC-32]
 gi|221565178|gb|ACM21150.1| inner-membrane translocator [Geobacter sp. FRC-32]
          Length = 320

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 66/284 (23%), Positives = 133/284 (46%), Gaps = 14/284 (4%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
              + + L +     + Y+ ++ + + I  M A  L++++G  G +SL     + +GAYS
Sbjct: 9   AAFVAIILVIPFLMKESYLINVMVFVGINTMLAVALNLLLGYAGQISLGHAAFFGLGAYS 68

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +L + +G++ WL++  +A + G    ++G P LK +G YLA+ATL    I   +  + 
Sbjct: 69  SGVLTATHGMNPWLVMFAAAAVVGMLAFLIGFPILKLKGHYLAMATLGFGIILYIVFNET 128

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             IT G +G+     L     T  S ++               YY++     L     + 
Sbjct: 129 VDITGGPSGLSGIPNLQLGQMTFDSDMKN--------------YYLIWVFALLVMLFAVN 174

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  + I  + R I D++ A   +       K+  FA+S+    +AG+ +A +   ++P  
Sbjct: 175 LTNSRIGRSLRAIHDSEIAARVMGVNARLLKVQIFALSAVISSLAGSLYAHTMAFVAPAS 234

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           F F+ ++ ++++V++GG+ S+       A+L  + E    ++ Y
Sbjct: 235 FGFNFSVELLTMVVIGGLGSVYGSFLGAALLTLLPEFLRFLHDY 278


>gi|326382667|ref|ZP_08204358.1| branched-chain amino acid abc transporter integral membrane subunit
           [Gordonia neofelifaecis NRRL B-59395]
 gi|326198786|gb|EGD55969.1| branched-chain amino acid abc transporter integral membrane subunit
           [Gordonia neofelifaecis NRRL B-59395]
          Length = 610

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 61/300 (20%), Positives = 112/300 (37%), Gaps = 16/300 (5%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            +       F                  I  +   GL++ +G  G L+L     YA GAY
Sbjct: 18  ALVFAAAVFFAPMMGLDAANTRQVQLACILALVVSGLNLSLGYAGELALGQAAMYAAGAY 77

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  +L       I + +  +  ++   G+I G+P L+     LA+ +  +  +  +IL  
Sbjct: 78  TAGLLSQEGHTDIVVQLIAAGAVALIVGVITGIPGLRLGSWSLAMTSFFLILLVPDILAI 137

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           +   T G+ G+   +   F G  + +                  YYV+ G+      ++ 
Sbjct: 138 FGGKTGGRNGLSGMEPPTFFGQDIGTD----------------FYYVVAGVTIAWFVVMR 181

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  +    A+RT++ +     S   ++   KL  +A+ +   G+AGA FA +   I+P+
Sbjct: 182 NLVVSRHGIAFRTLKQSPVLARSQGVSVFRMKLLGYALGAIPAGLAGALFANTDLFIAPE 241

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F F+    V++  ILGG  S+       AI+            Y       F     + 
Sbjct: 242 AFGFTFATAVLAASILGGSASVYGAVLGAAIMQFGPNQSTAFQEYALVVYGGFLIVGGVL 301


>gi|150376327|ref|YP_001312923.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
 gi|150030874|gb|ABR62990.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
          Length = 537

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/297 (14%), Positives = 91/297 (30%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++      S   L   S  I+     +  
Sbjct: 258 AAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLFEWSLAIALPLAFLFT 317

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       +   +     + +L  W      +  +                     
Sbjct: 318 GTVGLVLER--GVIRFLYGRPLETLLATWGISLILQQSVRTIFGPTNREVG-NPFWMSGA 374

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++++    + A+++  L++T +    R +  N++   S+        
Sbjct: 375 FELGGLTITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQNRRMASSMGIRTPLVD 434

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              FA+ S   G+AG   A S+             I    +V+ GG+ +L         L
Sbjct: 435 ALTFALGSGIAGIAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLVGAFSL 492

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             + +                          L+++ + L I  R   L  L+  +  
Sbjct: 493 GILNKFLEPYAGAVLGK-------------ILVLVLIILFIQKRPRGLFALKGRAVE 536


>gi|303247751|ref|ZP_07334020.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
 gi|302490835|gb|EFL50734.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
          Length = 338

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 65/322 (20%), Positives = 122/322 (37%), Gaps = 20/322 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +    L+   L    +      + I +  Y       ++V G  G+L L   +   IGA
Sbjct: 10  LLGLAALVAFGLPLVVTSPTYLQILILLFFYAYLTTSWNLVGGFAGVLPLGHSVFVGIGA 69

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL  +YG+S WL + V  +++   G+IMGLP+ + RG Y  + T+  +E  + I+ 
Sbjct: 70  YTSTILTLQYGVSPWLGMLVGGVLAAIVGIIMGLPTFRLRGAYFCLCTIAFAEGIRVIVE 129

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +                   +   +    F +   + ++  YY++L M  L   + 
Sbjct: 130 NINYL---------GPLHINGPRGLLIPLTQGSFWNYQFMSKLPYYYIILVMLVLVLFLT 180

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRIS 257
             + R+ I        +  +A  +L   +   KL A A+S  F  +AG F+A        
Sbjct: 181 WGISRSKIGYYLAAGGEEPEAAGALGINVANYKLLAMALSCFFTALAGTFYAQLMLYFYP 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +     +  +  I ++GG  +++       +L  + E            L        
Sbjct: 241 KGLMGLDLSFEIAFIALIGGRGTIAGPVIGALVLRPLNEFTRIYLSDMLPGL-------- 292

Query: 318 MRHTTLMVIALFLVILMRSHSL 339
             H  +  + L LV+L +   L
Sbjct: 293 --HLVIFGLILILVMLYKPQGL 312


>gi|187926697|ref|YP_001893042.1| ABC transporter related [Ralstonia pickettii 12J]
 gi|241666209|ref|YP_002984568.1| ABC transporter [Ralstonia pickettii 12D]
 gi|187728451|gb|ACD29615.1| ABC transporter related [Ralstonia pickettii 12J]
 gi|240868236|gb|ACS65896.1| ABC transporter related [Ralstonia pickettii 12D]
          Length = 608

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/299 (15%), Positives = 113/299 (37%), Gaps = 15/299 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L     +++   L    + ++  ++   I +Y + A GL ++ G  GL S        +G
Sbjct: 22  LLTALFVIVLALLPVLPTPEFWITLLNYIGLYSLVALGLVLLTGVGGLTSFGQAAFVGLG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYS   L ++YG+S W+ +    +I+     ++GL +++  G YL +AT+        + 
Sbjct: 82  AYSTAYLTTQYGVSPWIGLLAGLVITVVSAYLIGLITMRMSGHYLPLATIAWGLSLFFLF 141

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
              + +                     + I       + +     M+Y++  +  ++   
Sbjct: 142 GNLEFL---------------GKYDGLNGIPVLNLLGNPLQTGREMFYLIWAVVVVAVLA 186

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  +    A R ++       ++     + K+  F  ++    ++G  +A  +  ++
Sbjct: 187 VQNLLNSRPGRAIRALKGGGTMAEAMGVNTAWMKVVIFVCAAVLACLSGFLYAHLQRAVN 246

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P  F  +  I  + + ++GG+  +        +L  + +    +      +   F+   
Sbjct: 247 PTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGVLTILKDSLQSILPKLLGTNGNFEIIV 305


>gi|126724809|ref|ZP_01740652.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2150]
 gi|126705973|gb|EBA05063.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2150]
          Length = 358

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 76/344 (22%), Positives = 140/344 (40%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F +R ++Y             + +  +    +  +  ++ +  LIY + A GL+I+ G  
Sbjct: 20  FPIRFDRYRFY------AVVFVAYCIIPFIINDYWASAIFVPFLIYAIAAIGLNILTGFC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+G YS   ++ S   ++I + + ++ +I+   G++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGGYSVYKLMTSFPDVNIAIHVLLAGLITAGVGILFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N                       F    +        
Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGMINSPERTIFGYIVTGPSTEAWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y + L    L A +   + R  +   W  IRD   A   +    + AKLSAFA+SS FI
Sbjct: 185 KYLICLVFLTLCAVLARNMTRGTLGRKWMAIRDMDIAAEIIGVDPLKAKLSAFAISSFFI 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G+AGA F A     +   D F  +++ +V+ ++I+GG+ S+       A ++ +  L   
Sbjct: 245 GIAGALFFAVYLGAAEAGDSFGITKSFLVLFMIIIGGLGSIFGSFAGAAFMVLMPVLLKN 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +                     ++   + + ++M  H L +L  
Sbjct: 305 VLVGQLGWATDLA---AHLEFVIVGALIIIFLIMEPHGLAQLWR 345


>gi|113869589|ref|YP_728078.1| ABC-type transporter, ATPase and permease components [Ralstonia
           eutropha H16]
 gi|113528365|emb|CAJ94710.1| ABC-type transporter, ATPase and permease components [Ralstonia
           eutropha H16]
          Length = 613

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 62/335 (18%), Positives = 133/335 (39%), Gaps = 27/335 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           RLN+   ++    VV  LL      A  + ++  ++G  I +Y + A GL ++ G  G+ 
Sbjct: 21  RLNRNRVLVLAFIVVLVLL-----PALPTPEFWITLGNYIGLYSIVAIGLVLLTGVGGMT 75

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S        +GAYS   L +++GLS W  + V  +I+ A   ++GL +++  G YL +AT
Sbjct: 76  SFGQAAFVGLGAYSTAYLTTQFGLSPWFGLMVGLVITMASAYVIGLITMRMSGHYLPLAT 135

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           +        +    + +     G+     L   G  ++S                 M+Y+
Sbjct: 136 IAWGLSLFFLFGNLEFL-GKYDGLNGIPVLSLFGIELQS--------------GRSMFYL 180

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  L+   +  L  +    A R ++       ++     + K+  F V++    ++G
Sbjct: 181 IWAVVLLAVLAMQNLLNSRPGRAIRALKGGGVMAEAMGVNTAWMKVVIFVVAAVLACVSG 240

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             +A  +  ++P  F  +  I  + + ++GG+  +        IL  + ++  G+     
Sbjct: 241 FLYAHLQRAVNPTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGILTILKDVLQGVLPKLL 300

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            +   F          +  + L L++      +  
Sbjct: 301 GANGNF-------EIIVFGVLLVLLLQYARDGIWP 328


>gi|226360135|ref|YP_002777913.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226238620|dbj|BAH48968.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 329

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 60/310 (19%), Positives = 122/310 (39%), Gaps = 6/310 (1%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           +G   + Y + A GL++  G  GLL+   +    +G Y   I+   Y   +W+ I V   
Sbjct: 15  IGPSAIFYALLAIGLNLHFGYAGLLNFGQIGFALLGGYGVGIMTVTYQQPLWVGILVGLA 74

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIYVADRLYFL 159
            +G   +++G+P+L+ R DYLAI T+  SEI + I        IT    G++     +  
Sbjct: 75  AAGLLAVVLGIPTLRLRADYLAIVTIAASEILRLIFRSTASDSITGSTNGLFGFADPFTT 134

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            +   S  ++      F   +++   V   +  +    +  L  +      + +R+++ A
Sbjct: 135 LSPFDSGKQYNFLGVKFYGDDLWSMVVGWTLVLVLCGFVYLLTHSPWGRVLKAVREDEDA 194

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   +   K+ A  +     G+ G F A     I+PD +  ++       +ILGG  
Sbjct: 195 ARALGKNVFVYKMQALVLGGMIGGLGGVFNALQTKSINPDFYSTAQTFFAFGALILGGAA 254

Query: 280 SLSKIAKATAILIGVV----ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           ++        +   ++     L           L   +         L+ I + ++++ R
Sbjct: 255 TVFGPVVGAMLFWFLLAIPDALLRQAISGPEPLLPLTEQQVGAMRFVLLGIMIAVLMIFR 314

Query: 336 SHSLLRLRTP 345
              +L  +  
Sbjct: 315 PQGILGNKRE 324


>gi|307266491|ref|ZP_07548025.1| inner-membrane translocator [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918471|gb|EFN48711.1| inner-membrane translocator [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 322

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 71/316 (22%), Positives = 128/316 (40%), Gaps = 41/316 (12%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               ++    I I I ++ A  L++VVG  G  S+      A+GAY+  I+   +     
Sbjct: 32  IISPFVMLNLIIIAINIILAVSLNLVVGFTGQFSIGHAGFMALGAYASAIMSLNFNAPFI 91

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + + V A+++G  G+I+G+P+L+ RGDYLAIATL ++EI + ++     +  G  G+   
Sbjct: 92  VSLLVGAIMAGIGGIIIGIPTLRLRGDYLAIATLGLAEIIRGVITNIDYL-GGAYGLMGI 150

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            +                            +    G   ++  +I    +++   A  ++
Sbjct: 151 PQRTN-------------------------WLWAFGCMLVTVLVIKNFVQSSHGRACISV 185

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R+N+ A  ++       K+ AF + S F G+ GA  A     I P+ F F ++  ++ +V
Sbjct: 186 RENEIAAEAMGINTTKYKVIAFTMGSFFAGIGGALLAHYITFIEPNAFNFLKSFDILVMV 245

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG  SL+    A  +L  +      +                             V+L
Sbjct: 246 VLGGQGSLTGSVVAAIVLTLISTFLQSLAELRLIIYAIILIL---------------VML 290

Query: 334 MRSHSLLRLRTPSNFL 349
            R   LL     S  L
Sbjct: 291 FRPQGLLGTHELSFKL 306


>gi|34557811|ref|NP_907626.1| ABC transporter permease [Wolinella succinogenes DSM 1740]
 gi|34483529|emb|CAE10526.1| ABC TRANSPORT SYSTEM PERMEASE PROTEIN [Wolinella succinogenes]
          Length = 318

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 58/316 (18%), Positives = 109/316 (34%), Gaps = 7/316 (2%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             YI  +   I I+ + A   +++ G  G LSL      A+GAY   I+         L 
Sbjct: 7   NDYILRIMNNIFIFAILAVSYNLINGVTGQLSLEPNGFVAVGAYITSIMLLSPEAK--LD 64

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +   A        +            +  A L +   F    ++   +     G     +
Sbjct: 65  MYQLADPHALVLWMSSSFIPALLASGVCAALLALLLSFPVFRVRGDYLAIVTLGFGFIIK 124

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           +      V +            I +I   Y    +   +  +IL +  +    A + +RD
Sbjct: 125 I----LAVNNPQITNGAIGLNEIPQITNIYWSGIIALAATILILQIVYSKFGRAMKAVRD 180

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  ++       K  AF  S+   G+ G   AA    ISPD+F F     ++ I++L
Sbjct: 181 DEDAAIAMGIDTFRIKTCAFTTSAFLEGIGGGLLAALLTTISPDLFDFMLTFQLLIIIVL 240

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S S       I+IG  E    ++            ++      +  + L +++L  
Sbjct: 241 GGLGSTSGAILGAIIVIGGGEWLRFLDQPLSFFGQDLG-TYPGLRMVIFSVILLILMLFA 299

Query: 336 SHSLLRLRTPSNFLER 351
              ++  +       R
Sbjct: 300 REGIMGKKELWELFRR 315


>gi|217968845|ref|YP_002354079.1| inner-membrane translocator [Thauera sp. MZ1T]
 gi|217506172|gb|ACK53183.1| inner-membrane translocator [Thauera sp. MZ1T]
          Length = 346

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 73/321 (22%), Positives = 133/321 (41%), Gaps = 16/321 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A +  L + L      + +Y   +   + I +    GL+I+ G  GL+SL       IGA
Sbjct: 24  AWLAILAVALIGFPFLADEYWLYLACLVAINIASTTGLNILTGYTGLVSLGQAAFMGIGA 83

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+   L  + G  + L +     ++   G+++GLPSL+ +G YLAIAT+  S +   +  
Sbjct: 84  YTVAALEQKLGAPVLLNLLAGGFVAMLGGLVVGLPSLRVKGLYLAIATIAASVVLHFVFA 143

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  +T G AGI +        +   S                 +Y++ + +  L  +  
Sbjct: 144 NWHAVTGGHAGITLVPAEILGLSFDTSFR---------------LYWLFVPITILMVAGA 188

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L RT I  A+  IRD   +   L   ++  KL +F +SS + G+AG  +A     ++P
Sbjct: 189 ANLFRTRIGRAFIAIRDRDISAEVLGIPLLRYKLLSFGLSSFYAGVAGGMWAYFFRVVTP 248

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F    +I  ++ VI+GGM ++         +  V E    +   +           + 
Sbjct: 249 ESFPLILSIFFLAAVIVGGMGTILGAILGAVFMTMVPEALK-LVVGWLPLSADATLILSP 307

Query: 319 RHTTLMVIALFLVILMRSHSL 339
             T +  + +   ++     L
Sbjct: 308 VRTIVFGVLIVGFLVFEPLGL 328


>gi|110835371|ref|YP_694230.1| branched-chain amino acid ABC transporter permease [Alcanivorax
           borkumensis SK2]
 gi|110648482|emb|CAL17958.1| branched-chain amino acid ABC transporter, permease protein
           [Alcanivorax borkumensis SK2]
          Length = 558

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 97/301 (32%), Gaps = 29/301 (9%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG----SRYGLSIWLLIPVSAMISGACG 107
            A GL+I  G +G++++       +GAY+  ++     + +  S+ + IP + ++S   G
Sbjct: 282 AAIGLAITFGVMGVINMAHGELIMLGAYTTYVVQQLLPTSHEWSLLIAIPAAFLVSAFVG 341

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +++                 +     + +L  +      +  + V              +
Sbjct: 342 ILIERFV----------IRFLYGRPLETLLATFGVSLILQQAVRVIFSPLNRTVITPEWM 391

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                 +          Y++     +  +++  L++T +    R +  N+    SL    
Sbjct: 392 SGALEINPVFSLTYNRLYIIFFALAVFLALLTLLKKTRLGLQVRAVSQNRATARSLGIRS 451

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
                  F + S   G+AG   A   +         S  I    +V+ GG+ +L     A
Sbjct: 452 ERVNALTFGLGSGIAGVAGVALAQLTNV--GPNLGQSYIIDSFMVVVFGGVGNLWGTLTA 509

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
              L    +L   M                     ++++ + L I  +   L   R  + 
Sbjct: 510 AFSLGIANKLLEPMAGAVLAK-------------IVVLVFIILFIQRKPRGLFPQRGRAA 556

Query: 348 F 348
            
Sbjct: 557 E 557


>gi|149200898|ref|ZP_01877873.1| inner-membrane translocator [Roseovarius sp. TM1035]
 gi|149145231|gb|EDM33257.1| inner-membrane translocator [Roseovarius sp. TM1035]
          Length = 358

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 80/344 (23%), Positives = 140/344 (40%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F +R ++Y     L+A       F  +    +  +++++ +  LIY + A GL+I+VG  
Sbjct: 20  FPIRFDRYRYYAVLVA------AFAVVPFVINDYWVNAVFLPFLIYSIAAIGLNILVGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +   +SI+  I ++  I+    ++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYASYKLMTAFPEVSIFFHIILAGGITSIVCVLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N                T      F    +        
Sbjct: 134 AVATLAAQFFLVWLFNRVGWFYNYS---------ASGQITAPERTVFGIAVTGANNPPWS 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L     +A I   L R      W  IRD   A   +    + AKL+AFAVS  F+
Sbjct: 185 AYLFCLVFTVAAAIIARNLTRGMAGRKWMAIRDMDIAAEIIGVNPLKAKLTAFAVSGFFV 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F A         + F  +++ +V+ +VI+GG+ S+       A L+ +  L   
Sbjct: 245 GISGALFFAVYLGAVEVGEAFGINKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVLLKN 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                   L             ++   + + ++   H L +L  
Sbjct: 305 ---TLVGGLGWPTDLAAHLEFIIVGALIIIFLIAEPHGLAQLWR 345


>gi|26987354|ref|NP_742779.1| inner-membrane translocator [Pseudomonas putida KT2440]
 gi|148545907|ref|YP_001266009.1| inner-membrane translocator [Pseudomonas putida F1]
 gi|24982006|gb|AAN66243.1|AE016252_11 branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas putida KT2440]
 gi|148509965|gb|ABQ76825.1| inner-membrane translocator [Pseudomonas putida F1]
          Length = 339

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 60/337 (17%), Positives = 121/337 (35%), Gaps = 30/337 (8%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            L + K      L  VV  L+    L  +       ++  +ILI+ M A   ++++G  G
Sbjct: 6   PLPVAKGRAPALLSLVVASLVALPLLLPSA------TLATEILIFAMAALACNLLLGYTG 59

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           LLS    I + +GAY   +L       ++  +  +A+      +++G  +++  G Y  +
Sbjct: 60  LLSFGQGIFFGVGAYGAALLMIHLQWGMFAALLGAAVFGAFLALLVGALAIRRTGIYFVM 119

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL  S++   +       T G  G+    R           I         +      Y
Sbjct: 120 LTLAFSQMAYFLAYTLSGWTGGDNGLLDVPRP---------NIEIAGHVLVDLADPRHFY 170

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +  +  L  +  L + R+   +    IR+N+    ++       K+  F +S A  G+
Sbjct: 171 VFVAVLFLLIFAAALRVIRSPFGSTLLAIRENETRAAAIGYDTRHFKILVFMLSGAITGI 230

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA +A               +  ++ + I+GG  SL         ++ + ++   +   
Sbjct: 231 AGALYAMLLHFAPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGAIVLLGDVLSELWPR 290

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +                 L+ + L LV++     L  
Sbjct: 291 W---------------LMLLGVILILVVVFMRGGLWG 312


>gi|307726403|ref|YP_003909616.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|307586928|gb|ADN60325.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
          Length = 369

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 68/340 (20%), Positives = 132/340 (38%), Gaps = 33/340 (9%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           L L++Y  +L  L VV  L L L  G         S+  ++L++ + A G ++++G  GL
Sbjct: 23  LALHRYRFLLLALLVVCILPLTLRSG---------SLATEVLVFALAALGCNLLLGHTGL 73

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           LS    I + +G+YS  ++ ++  L + + +  + +I  A   ++G  S++ RG Y  + 
Sbjct: 74  LSFGQGIFFGLGSYSAGLVLTKAALPVPVALLAAILIGAAAAALVGWFSIRQRGTYFVML 133

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL   ++F  +      +T G  G+    R           +  F      +      Y 
Sbjct: 134 TLAFGQLFYFLAYTTPDLTGGDNGLLDIPRPA---------LGLFGKELVALTSPWQYYG 184

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            +  +  +   +++ +  +        IRDN+    ++   +   KL AF VS A  G+A
Sbjct: 185 FVAVLFLVVFWLMMRVSHSVFGRTLLAIRDNEARAAAVGYDVKRFKLMAFVVSGAVTGLA 244

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA  A            +  + +++ + ++GG  +L       A  +   +    +   +
Sbjct: 245 GALHALMTGIAPLSNIDYHTSEMILVMTVIGGTGNLFASVLGAAFYVLFADWLSTLWPRW 304

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                            L+ I L  V L     L  L   
Sbjct: 305 ---------------LLLLGIVLMAVSLYMQRGLWGLGER 329


>gi|84687013|ref|ZP_01014896.1| branched-chain amino acid ABC transporter, permease protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84664987|gb|EAQ11468.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 365

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 72/322 (22%), Positives = 131/322 (40%), Gaps = 13/322 (4%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L   + +      +Y  +     LI+ +   GL + VG  G +SL      AIGAY+
Sbjct: 25  IAVLAGIMIVLPFLVGEYYLAEATNTLIWALAGMGLMVAVGHTGQVSLGHAAFLAIGAYA 84

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
              L +       L  P++ +I+G  G I+ +P+++  G YLAIATL +  I + ++I  
Sbjct: 85  DSALMNAGLP-FLLSFPIAGLITGIFGAIIAIPAVRMSGIYLAIATLAVFVIVEEMVIML 143

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           +PIT G  GI                I+ F             Y+++LG+  L A     
Sbjct: 144 EPITGGVGGIMAP------------SIQIFGISFDRYGALQNFYWLILGVVALVAWGYAN 191

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L R+    ++  +RD++ +  +L   +   K  AF +S+   G+AGA         + ++
Sbjct: 192 LMRSPTGRSFLAVRDSEVSARALGINVTRTKSLAFGLSTGVTGLAGALMGHYIGFYNYEL 251

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F    +I ++ +V +GG+  +        ++  V +           +      S     
Sbjct: 252 FSIFISINLLLVVTIGGLGFIQGAFLGAILITAVPQAIAIARDGLNANFGIDLGSVPGLD 311

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
           T +  + L L I+     L   
Sbjct: 312 TMIFAVILILFIIFEPTGLYGR 333


>gi|313672659|ref|YP_004050770.1| amino acid/amide abc transporter membrane protein 2, haat family
           [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939415|gb|ADR18607.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Calditerrivibrio nitroreducens DSM 19672]
          Length = 278

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 70/310 (22%), Positives = 119/310 (38%), Gaps = 41/310 (13%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
           +     Y+  +     I ++   GL+++ G  G LSL      +IGAYS   L +  G  
Sbjct: 4   SFLFNDYVSQVATTTGINIIMVLGLNLITGVTGQLSLGHAAFMSIGAYSSAYLSTALGAP 63

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             + +          G I+G+P L+ RGDYLAIATL   EI +  L+       G  GIY
Sbjct: 64  FTVALIFGTFTGALFGAILGIPILRLRGDYLAIATLGFGEIIRVFLLN-TDFLGGALGIY 122

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                              +L +   +   +  L ++    A +
Sbjct: 123 GIPASTNFWN-------------------------VLVLTIFTIFFMYRLEKSRHGMAIK 157

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
           +IR+++ A   +   I   K+ +F + SAF  + G  +A     I+P  F F ++I  + 
Sbjct: 158 SIREDEIASEMMGINISRYKIISFTIGSAFAALGGTLYAHFMTYINPMDFGFMKSIEQLC 217

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +++LGGM S+      T +L  + E     + Y                     + L L+
Sbjct: 218 MLVLGGMGSIFGAVVGTIVLSTIPEFLRFASEY---------------RMLTYGVVLILM 262

Query: 332 ILMRSHSLLR 341
           ++ R   L  
Sbjct: 263 MIFRPQGLFG 272


>gi|138896565|ref|YP_001127018.1| branched chain amino acid ABC transporter permease [Geobacillus
           thermodenitrificans NG80-2]
 gi|134268078|gb|ABO68273.1| Branched-chain amino acid ABC transporter (permease) [Geobacillus
           thermodenitrificans NG80-2]
          Length = 328

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 69/344 (20%), Positives = 141/344 (40%), Gaps = 42/344 (12%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  +   +  +LA  +  ++   + +     +  +    + I V+ A  L +++G  G  
Sbjct: 9   KRTRGFWVSIILAFAFFAVVQWLITSGTLNIFYVNTLFFMAINVILAASLHLIIGITGQF 68

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S+     +A+GAY+  I+  +  L   + + V+ + +   G+I+G+PSL+ +GDYLAIAT
Sbjct: 69  SIGHAGFFAVGAYASAIMTMKLQLPFAVGVLVAGVAAMLAGLIIGVPSLRLKGDYLAIAT 128

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + +L+    +                                  +  +  +  
Sbjct: 129 LGFGEIVRIVLLNIDYVGGAS---------------------------GMTVTHMTTWPW 161

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +     ++  +I     +    A  +IR+++ A  ++     + K++AFA+ S F G+AG
Sbjct: 162 VFACLLITIIVIANFTNSTHGRACISIREDEIAADAMGINTTYYKVAAFAIGSFFAGIAG 221

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A +A     I P  F F ++  ++  V+LGG+ SLS    +  +L  V            
Sbjct: 222 ALYAHHFYIIQPSNFGFLKSFDILIFVVLGGLGSLSGATISAVLLTIVSTFLQNY----- 276

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                           +  + L  V+L R   L+  +  ++ L+
Sbjct: 277 ----------PETRMIIYSLVLIFVMLYRPTGLMGKKELTSLLK 310


>gi|260459127|ref|ZP_05807382.1| urea ABC transporter, permease protein UrtB [Mesorhizobium
           opportunistum WSM2075]
 gi|259034681|gb|EEW35937.1| urea ABC transporter, permease protein UrtB [Mesorhizobium
           opportunistum WSM2075]
          Length = 538

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 45/319 (14%), Positives = 100/319 (31%), Gaps = 18/319 (5%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           L    + + I        + ++ A GL+I  G +G++++       +GAY+  ++     
Sbjct: 237 LAFWDAGQNIWYGISLGSVLLLAAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQQVIR 296

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
            S   L   S +I+     ++             +   +     + +L  W      +  
Sbjct: 297 TSFPGLFDWSLVIALPLAFLVAAIVGLAIER--GVIRFLYGRPLETLLATWGVSLILQQA 354

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +              S      F    +       ++L+    +   ++  ++RT+    
Sbjct: 355 VRSIFGPTNQEVGNPSW-MSGSFSVGQLAITWNRLWILVFALTVFGVLLYVMKRTSWGLQ 413

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R +  N++   S+     +     FA+ S   G+AG   A S+             I  
Sbjct: 414 MRAVTANRRMAASMGIRTPWVDALTFALGSGIAGIAGV--ALSQIDNVSPNLGRGYIIDS 471

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             +V+ GG+ +L         L  V +                          ++++ + 
Sbjct: 472 FMVVVFGGVGNLWGTLVGAFSLGIVNKFLEPYAGAVLGK-------------IVVLVLII 518

Query: 330 LVILMRSHSLLRLRTPSNF 348
           L I  R   L  L+  +  
Sbjct: 519 LFIQKRPRGLFALKGRAVE 537


>gi|150389846|ref|YP_001319895.1| inner-membrane translocator [Alkaliphilus metalliredigens QYMF]
 gi|149949708|gb|ABR48236.1| inner-membrane translocator [Alkaliphilus metalliredigens QYMF]
          Length = 298

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 68/313 (21%), Positives = 118/313 (37%), Gaps = 41/313 (13%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y+  + I   I +M   GLS++ G  GL S       AIGAY    +  ++GL   
Sbjct: 1   MDWFYLKGILILSGINLMAVLGLSLLTGFTGLFSFGHAGFMAIGAYVTASMTVKFGLPFI 60

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + + AM++    + +G  +L  +GDY  IATL   E  + IL   +    G  G    
Sbjct: 61  PALLIGAMVASLVSLFIGRWTLNLKGDYFCIATLGFGEAIRLILDNVQYF-GGARGWPGI 119

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L                           +L M  +   I++ L R+      + I
Sbjct: 120 PLYTNLTN-------------------------VLVMNIIGVIILVNLIRSRHGRNMKAI 154

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R+ + A   +   +   KL++ A+S+A+ G+AG   A     I P MF+  ++  +  IV
Sbjct: 155 REEELASQIIGINVFKYKLTSLAISAAYAGIAGGMLAHYTGFIQPKMFQLIKSTELTIIV 214

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           I GG+ S+S       +L  + EL                         +   ++  +++
Sbjct: 215 IFGGLGSISGSVIGAIVLTALPELLRTFAR---------------WRLVVYGASVIFIMI 259

Query: 334 MRSHSLLRLRTPS 346
            R   L+     +
Sbjct: 260 TRPQGLMGGYEIT 272


>gi|192292086|ref|YP_001992691.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|192285835|gb|ACF02216.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 407

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 64/349 (18%), Positives = 128/349 (36%), Gaps = 14/349 (4%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++       + LL     ++    +  T        +  +  IY +FA G +I+ G  G 
Sbjct: 1   MKHTSKLADIALLIGFAIVVALGPIIFTPIGAGYPDLLQKFAIYGIFAIGFNILFGLTGY 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           LS        +G+Y+ V       + +   + +S +++G   + +G  SL+  G Y +I 
Sbjct: 61  LSFGHAAFLGVGSYAAVWSFKLLSMDLLPAVAMSVVLAGLLALAIGFVSLRRSGIYFSIL 120

Query: 126 TLIMSEIFQNILIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           TL  +++  N+      PITNG+ G+ V  +           +          I     +
Sbjct: 121 TLAFAQMCYNMAYSVLTPITNGETGLRVLRQDPRYLDAAIGYVSPTPSLFGMQITGWTGF 180

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y+   +   +  + + + R+      R I+ NQ        +     LSAF +S  F G+
Sbjct: 181 YICGAVLVAAFGLSIAIFRSPFGMTLRAIKSNQNRMGYTGYSTRPYLLSAFVISGMFAGL 240

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA  AA+      +  +++ +  V+ + ILGG  +L      T I+     +    N  
Sbjct: 241 AGALLAATDPLAGAERMQWTASGEVVLMTILGGAGTLLGPVLGTGIIKYFENIFSAYNEA 300

Query: 305 YFNSLLKF-------------DCSFNMRHTTLMVIALFLVILMRSHSLL 340
              ++  F                        + +    V++     ++
Sbjct: 301 QLKAMFTFVPDGLREPVVKTLSLFVGEGWQLTLGLLFMGVVIFLPGGVM 349


>gi|254488254|ref|ZP_05101459.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. GAI101]
 gi|214045123|gb|EEB85761.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. GAI101]
          Length = 358

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 75/344 (21%), Positives = 146/344 (42%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ ++Y     L       +    +    +  +++S+ +  LIY + A GL+I+VG  
Sbjct: 20  FPIKFDRYRYYFVL------FVAIAVIPFMINDYWVNSLFLPFLIYAIAAIGLNILVGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ S   +S+ + + ++ +I+ A G++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKLMTSFPDVSMLIHVLLAGLITAAVGVLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N  A   ++           +      +          
Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYSASGQISAPERTFLGVNITGANTQAW---------A 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L     SA +   L R ++   W  IRD   A   +    + AKL+AFA+SS FI
Sbjct: 185 TYLFCLMFVIFSAYVARNLTRGSVGRKWMAIRDMDIAAEIIGVNPLRAKLTAFAISSFFI 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F +         + F   ++ +V+ ++I+GG+ S+       A L+ +  +   
Sbjct: 245 GISGALFFSIYLGAVEVGEAFGIQKSFLVLFMIIIGGLGSIFGSFAGAAFLVLLPVVLKI 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +   +                 ++   + + ++   H L +L  
Sbjct: 305 VGVDWLGWPTDI---VAHLQLVIVGGLIIVFLIAEPHGLAQLWR 345


>gi|209515009|ref|ZP_03263878.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209504635|gb|EEA04622.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 321

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 64/335 (19%), Positives = 132/335 (39%), Gaps = 26/335 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  ++ ++L L A+   LLL  +           ++G ++L+  + A  ++ ++G  G+L
Sbjct: 5   RQTRHHRLLTLTAIWAVLLLAPYWMPPLGG--YTALGTRVLVLGLAAMSVNFLLGFTGVL 62

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S      + +GAY   +       S  L +    ++ G  G ++G    + RG Y A+ T
Sbjct: 63  SFGHAAYFGLGAYGAGLALKFVAPSTPLALLCGTLLGGIAGALLGAVCARRRGVYFAMVT 122

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           +   ++F  I  +W  +T G  G+    R+          +         +      YY 
Sbjct: 123 IAFGQVFYYIAFQWSSLTGGDDGLRGFSRMP---------LHLGITTIDILSNADAFYYF 173

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L    L+  ++ ++ R+        IR+N++    L   +      AF +S  F+G AG
Sbjct: 174 VLFCLALTVGLMGFILRSPFGRTMIAIRENERRARFLGIPVDRHIWIAFTLSCFFMGFAG 233

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A +A   +   P    FS++   + + ++GGM SL       A+ + + +    +     
Sbjct: 234 ALYALLNNFADPRGLHFSQSGDFVMMAVMGGMRSLWGPLLGAAVFVVLQDYLSSI----- 288

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                      +   + + +    ++L     LL 
Sbjct: 289 ----------TVNWMSFVGMLFIAIVLFFPRGLLG 313


>gi|188582795|ref|YP_001926240.1| inner-membrane translocator [Methylobacterium populi BJ001]
 gi|179346293|gb|ACB81705.1| inner-membrane translocator [Methylobacterium populi BJ001]
          Length = 340

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 53/302 (17%), Positives = 114/302 (37%), Gaps = 25/302 (8%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++ + +LIY ++A G +++ G  GLLS      +  GAY   I    YGL     + ++ 
Sbjct: 52  ALAVNVLIYGLYAVGYNLLYGYTGLLSFGHAAFFGTGAYVTGIAIGTYGLHPLAAMALAV 111

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +++    + +G  S++ RG Y A+ TL ++++   + ++    T G+ G           
Sbjct: 112 VVASGLALALGALSIRSRGIYFAMVTLALAQLVYYVALQASSWTGGENG----------L 161

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                    F   S  ++  +  Y  +L     + ++I  +  +        IR+N+   
Sbjct: 162 RGFTVTTIDFGIVSLDILNPLTKYLFVLAFVGAALALISRILASPFGAVIEAIRENETRA 221

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +    +   KL AF +S  F G+AGA  A     +  D   +  +   + + ++GG  +
Sbjct: 222 RACGFDVERTKLLAFVLSGLFCGLAGALSAIHLSIVPLDSLAYHTSGTAVVMTLVGGAGT 281

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                     ++ + ++      ++                  +     L +L     L 
Sbjct: 282 FFGPFVGALTVLVLEDVLSLWTPHW---------------QLALGSVFILFVLFMPRGLW 326

Query: 341 RL 342
             
Sbjct: 327 GT 328


>gi|148258223|ref|YP_001242808.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. BTAi1]
 gi|146410396|gb|ABQ38902.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 520

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 91/297 (30%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++          L   S +I+     ++ 
Sbjct: 241 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQEVIRTRYPALFDYSLLIAAPLAFLVA 300

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       I   +     + +L  W      +  +  A           S      
Sbjct: 301 GAIGVLIER--TIIRFLYGRPLETLLATWGLSLILQQAVRSAFGPTNREVGNPSW-MSGA 357

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++L     + A ++  LR TA+    R +  N++   S+        
Sbjct: 358 FELGQITITYNRLWILCFTMAVFAILLAMLRYTALGLEMRAVTQNRRMAASMGIATSRVD 417

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   A S+          S  I    +V+ GG+ +L         L
Sbjct: 418 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFTL 475

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +    +                      +++ + L I  R   L  L+  +  
Sbjct: 476 GIANKFLEPVAGAVLGK-------------IAILVLIILFIQKRPRGLFALKGRAVE 519


>gi|319790905|ref|YP_004152545.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315593368|gb|ADU34434.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 644

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 64/335 (19%), Positives = 129/335 (38%), Gaps = 33/335 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
            L +      + A V  L+L +    T +  Y   + I +LI  +FA  L  ++G  G+ 
Sbjct: 314 PLRRPSNAYLIAAAVLALMLAVLPFLTVNSPYTMVLMIDLLIAALFATSLHFIMGPAGMH 373

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S      + +GAY   +L     L + + + V+ +++    ++ G  +++  G YLA+ T
Sbjct: 374 SFGHAAYFGLGAYGAALLVRSLHLPMEIALIVAPVVAALGALVYGWFAVRLSGVYLAMLT 433

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L  ++I   I  +W   T G  G+       +                  +  +   Y++
Sbjct: 434 LAFAQITWAITYQWDSFTGGSNGLTGVWPSEW------------------LSNKQAYYWL 475

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            L +       +  +  +    A R  RD+     ++   +   +  AF ++    G+AG
Sbjct: 476 TLVLVGAGVWWLRRVLFSPFGYALRAGRDSVLRADAIGIDVKRMQWMAFVIAGTVAGLAG 535

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A +A S+  ISP+     +++  + +V+LGG+ +L+           + +       Y+ 
Sbjct: 536 ALYAFSKGSISPESLSVGKSVDGLVMVLLGGIQTLAGPVVGAVTFTWLHDTVARNTDYW- 594

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                           L  I L LV+L     +  
Sbjct: 595 -------------RAMLGAIILILVLLF-PQGIAG 615



 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 100/306 (32%), Gaps = 17/306 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS--IWLLI 96
           + +         + A GLS++ G   +++      + +G Y    L  + G +   W  +
Sbjct: 10  LLNGLAGASSLFLVAAGLSLIFGVTRIVNFAHGSFFMVGIYVAYTLVEKLGSTLGFWPAL 69

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++A+  G  G ++ +  L+       +  L+ +     ++        G   +      
Sbjct: 70  LIAALAVGVLGALIEVLLLRRIYKAPELFQLLATFALVLVIKDAVLWLWGPDELLGPRAP 129

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                 +  +  ++++    +   + L L RT      R    +
Sbjct: 130 ----------GLKGSIEILGRQFPSYDLFLIVVGPLVLGLVWLLLTRTRFGTLVRAATQD 179

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +L     +   + FA+ +   G+ GA                +       +V++G
Sbjct: 180 REMVSALGVNQAWLFTAVFALGALLAGLGGALQLPREPA--TLEMDLNTIGAAFVVVVVG 237

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM SL     A  ++    E+     +     +   D SF+     +  + + +V++ R 
Sbjct: 238 GMGSLPGAYVAALLIA---EIKAVCIWLGVVQIFGVDVSFSKLTLMVDFLVMAIVLVWRP 294

Query: 337 HSLLRL 342
             L   
Sbjct: 295 WGLFGR 300


>gi|239621645|ref|ZP_04664676.1| permease of ABC transporter for branched-chain amino acids
           [Bifidobacterium longum subsp. infantis CCUG 52486]
 gi|239515520|gb|EEQ55387.1| permease of ABC transporter for branched-chain amino acids
           [Bifidobacterium longum subsp. infantis CCUG 52486]
          Length = 362

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 70/341 (20%), Positives = 129/341 (37%), Gaps = 42/341 (12%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +    ++     +  +  YI  + +   I ++    L++ +G LG L+L C    A
Sbjct: 16  FIGILAAFGIVMALCESGLADSYIKGIMMTACIAIIMTTSLNLTIGVLGQLTLGCCGFEA 75

Query: 76  IGAYSYVILGSR---------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           IGAY   +                   L   +  +++   G+++G+P+L+  GDYLAI T
Sbjct: 76  IGAYVAALTSKYMVAAGIAIDPTARFLLTTLIGGVVACVFGILIGIPALRLHGDYLAIIT 135

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + I+   K                        L +     +   I      YV
Sbjct: 136 LGFGEIIRVIIQNLKVAGG------------------MGLDKGAAGQALIGIERTANLYV 177

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  ++  ++    R+    A + IRD++ A  +      + K+  FA+S+ F G+AG
Sbjct: 178 VFWIMVVTVVVLFMFGRSRYGRAVKAIRDDEIAAGASGLNTTYLKVLVFAISAFFAGIAG 237

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             FA     ++P M  +  +I  + +V+ GGM SL+    +   L  + EL      Y  
Sbjct: 238 GIFAQYIGSLNPTMAGWLNSINYVIMVVFGGMGSLTGSIVSAIGLTILPELLRAFADY-- 295

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                              + L LV++ R   +      S 
Sbjct: 296 -------------RMLTYSVVLVLVMIFRPQGIFGSWEFSL 323


>gi|300813904|ref|ZP_07094208.1| amino acid or sugar ABC transport system, permease protein
           [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511967|gb|EFK39163.1| amino acid or sugar ABC transport system, permease protein
           [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 331

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 71/340 (20%), Positives = 142/340 (41%), Gaps = 45/340 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +  LL +    ++          +Y  ++   + I ++ A  L+I VG+LG ++L   
Sbjct: 9   YILAFLLLIGLYGIILFLNRQGIVNRYSLTVLRMVAINIILATSLNITVGNLGQITLGHA 68

Query: 72  IAYAIGAYSYVILG----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
              +IGAYS  +              L +     ++   G+I+GLP+L+ +GDYLAI TL
Sbjct: 69  GFMSIGAYSAALFAKSAIVPGMAGYILSLFFGGFVAFIFGIIIGLPALRLKGDYLAIVTL 128

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              EI + +LI++   T G  G+     +                             ++
Sbjct: 129 AFGEIIR-VLIEYFNFTGGAQGLSGIPMMKSFD-------------------------II 162

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  +  +++  +  T    A  +IR+++ A  +    + F K  AF++S+ F G+AGA
Sbjct: 163 YVIMIICVTLMYSVMTTRHGRAVLSIREDEIASEASGINVTFYKTFAFSLSAFFAGLAGA 222

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A +   I   +F ++++  ++ +V+LGGM S +    +  +L  + E+      Y   
Sbjct: 223 IYAQNIGVIDAKIFDYNKSFDILVMVVLGGMGSFTGSVISATVLTIIPEILRSFASY--- 279

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  + L ++++ R   LL  +  S 
Sbjct: 280 ------------RMVIYSLVLIVMMIFRPVGLLGRKEFSL 307


>gi|254466730|ref|ZP_05080141.1| inner-membrane translocator [Rhodobacterales bacterium Y4I]
 gi|206687638|gb|EDZ48120.1| inner-membrane translocator [Rhodobacterales bacterium Y4I]
          Length = 358

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 74/344 (21%), Positives = 140/344 (40%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ ++Y   + L       + F  +    +  + +++ +  LIY + A GL+I+VG  
Sbjct: 20  FPIKFDRYRYYVVLA------VAFGIIPFLINDYWANAILLPFLIYSIAAIGLNILVGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAYS   ++ +   +S+++ + ++  I+    ++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYSCYKLMTAFPEVSMFIHVLLAGGITAGVCVLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N                       F    +        
Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGQINAPERDTFGIIITGPNAPAWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L    + A +   L R      W  IRD   A   +    + AK++AFAVS  FI
Sbjct: 185 TYLFCLIFLTVCALVARNLTRGTQGRTWMAIRDMDIAAEIIGVNPLKAKMTAFAVSGFFI 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F A         + F  +++ +V+ +VILGG+ S+       A L+ +  +   
Sbjct: 245 GISGALFFAVYLGAVEVGEAFGINKSFLVLFMVILGGLGSIFGSFAGAAFLVLLPVVLKV 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +              F      ++   + + ++   H + +L  
Sbjct: 305 VGVDILGWPTDIVAHF---QLVIVGALIIVFLIAEPHGMAQLWR 345


>gi|254469537|ref|ZP_05082942.1| ABC transporter permease protein [Pseudovibrio sp. JE062]
 gi|211961372|gb|EEA96567.1| ABC transporter permease protein [Pseudovibrio sp. JE062]
          Length = 526

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 49/320 (15%), Positives = 100/320 (31%), Gaps = 18/320 (5%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           L   ++ + I        + ++ A GL+I  G +G++++       IGAYS  ++     
Sbjct: 225 LAFWETGQNIWYGLSLGSVLLLAAIGLAITFGVMGVINMAHGEIVMIGAYSTFVVQDLIR 284

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
            S       S  I+      +            ++   +     + +L  W      +  
Sbjct: 285 TSFPEAFEYSLAIALPAAFFVSGVVGLALER--SVIRFLYGRPLETLLATWGVSLMLQQA 342

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           I                     F    +      +++L+   F+ A +++ L+RT     
Sbjct: 343 IRSIFGPTNQEVGNPDW-MSGAFELGGLTLIANRFWILVFALFVFAVLLVVLKRTHFGLQ 401

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R +  N+    S+     +     FA+ S   G+AG   A S+             I  
Sbjct: 402 MRAVTQNRGMAASMGIRTPWVDAFTFALGSGIAGIAGV--ALSQISNVSPNLGQLYIIDS 459

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             +V+ GG+ +L         L    +     +      +L                A+ 
Sbjct: 460 FMVVVFGGVGNLWGTLVGAMSLGVANKFLEPYSGAVLAKILTLT-------------AII 506

Query: 330 LVILMRSHSLLRLRTPSNFL 349
           L I  +   L  L+  +  +
Sbjct: 507 LFIQKKPRGLFALKGRAVEV 526


>gi|254504634|ref|ZP_05116785.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222440705|gb|EEE47384.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 318

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 66/309 (21%), Positives = 124/309 (40%), Gaps = 24/309 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
                Y   +G  + +  +   GL I++G  G +SL       IGAY+  +     G+  
Sbjct: 23  FFPSGYYYRVGALVFVNALSVVGLVILIGYAGQISLGHAGFAGIGAYACALAPVHLGIPP 82

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            L I + A IS    +++G P L+ +G YL +ATL    +   +L   + +T G  G+ V
Sbjct: 83  VLAILLGAAISAVLALLIGRPILRLKGYYLGVATLGFGILVSMVLSNERGLTGGPDGMAV 142

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                        L    R     +    F Y            I L L ++A   A R 
Sbjct: 143 PS---------LGLRPLLRDMGLRLSGGEFWYIFNAAALLTGIWIALNLYQSATGRAMRA 193

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +  ++ A  ++   +   KL AF +S+ +  + G+  A     I+PD+  F  ++ ++++
Sbjct: 194 LHGSETAAQTVGIDVSRFKLQAFIISAVYASVGGSLLALQNGFITPDVAGFMHSVEMVTM 253

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            +LGG+ S+       A+L  + ++    + Y                  ++ + + LV+
Sbjct: 254 AVLGGVGSVLGATFGAAVLTLLPQILTVFHDY---------------EHLVLGLVMILVM 298

Query: 333 LMRSHSLLR 341
           +     LL 
Sbjct: 299 IFLPLGLLP 307


>gi|256828800|ref|YP_003157528.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
 gi|256577976|gb|ACU89112.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
          Length = 321

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 73/325 (22%), Positives = 131/325 (40%), Gaps = 29/325 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++ +     + +         Y  ++ I   ++ M A GL ++VG  G +SL     Y +
Sbjct: 7   MIWLAAFFGVLMLAPTLLPNNYYLTILILGCLHAMNAVGLCLLVGHAGQISLGHAGFYGL 66

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+   L +  GLS+ L +     ++    +++GLPSLK +G YLA+ATL    I   +
Sbjct: 67  GAYTTSYLSTTVGLSVGLSMLAGVGLTAIVAVLVGLPSLKLKGHYLAMATLGFGIILSIL 126

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
             +   IT G +G     RL   G  +R                + ++ ++  +  L   
Sbjct: 127 FTETVDITGGPSGFVGIPRLSLFGWELRKD--------------VTLFRLVAVILCLFVW 172

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +   L  + +  A R +  +++A  ++   I   KL  F +S+AF G AG  +A     I
Sbjct: 173 LSFNLLHSRVGRALRALHTSERAAEAMGVDIANYKLLVFVLSAAFSGFAGVLYAHYLTFI 232

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +P  F F  ++ +I +V+LGGM S+         +  + E                    
Sbjct: 233 APSSFGFMFSVELIVMVVLGGMISVPGAIVGAFFITVLPEFLRAFE-------------- 278

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 L    L L ++     +  
Sbjct: 279 -NIEVLLFGAILVLCMMFLPDGMAG 302


>gi|83647207|ref|YP_435642.1| branched-chain amino acid ABC transporter permease [Hahella
           chejuensis KCTC 2396]
 gi|83635250|gb|ABC31217.1| ABC-type branched-chain amino acid transport system, permease
           component [Hahella chejuensis KCTC 2396]
          Length = 417

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 50/340 (14%), Positives = 93/340 (27%), Gaps = 33/340 (9%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L      A     Y  ++  + L Y + A  + ++ G  G+LSL     +A+G Y+  + 
Sbjct: 37  LTMTPGSALHVSTYTVTLLGKYLCYALLALAVDLIWGYCGILSLGHGAFFALGGYAMGMY 96

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
             R      +                 LP      D    A L+++     +   +  + 
Sbjct: 97  LMRQVGDRGVYGDPLLPDFMVFLNWKELPWYWHGFDNFGFAMLMVALAPGLLAFVFGWLA 156

Query: 145 NGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                                    +  D  +     +        F          ++ 
Sbjct: 157 FRSRVTGVYLSIITQALTYALMLAFFRNDMGFGGNNGLTDFKDLLGFNLQSDATRCGLFI 216

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
                  L   +   +  + +      +RD +     L   +   KL  F VSS   G+A
Sbjct: 217 ASAVALMLGYVLCRRIVNSKLGRVLVAVRDAEARTRFLGYRVDKYKLFVFVVSSVLAGIA 276

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA +      I+P  F    +I +I  V +GG  +L         +        G     
Sbjct: 277 GALYVPQVGIINPGEFSPINSIEIIIWVAVGGRGALYGAVIGAIAVNYAKSYFTG----- 331

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                    +F       +     +  L     L+ L   
Sbjct: 332 ---------AFPELWLYCLGALFVVTTLFLPKGLVGLFER 362


>gi|227872325|ref|ZP_03990680.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Oribacterium sinus F0268]
 gi|227841832|gb|EEJ52107.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Oribacterium sinus F0268]
          Length = 352

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 72/343 (20%), Positives = 138/343 (40%), Gaps = 24/343 (6%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M    ++  K   +   + ++   ++ LFL +      +  + + + IY + A  L++VV
Sbjct: 1   MKNVQMKKIKDIFLNYGVILIVYFVVQLFLKSGSVSSLMKGLLVPLCIYSILAISLNLVV 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLP 113
           G  G LSL       +GA+                 L  ++ + + A+ +G  G ++G+P
Sbjct: 61  GISGELSLGHAGFMCVGAFFSASCSMLLKGSSLPPMLIFFIALCIGAISAGFFGFLIGIP 120

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
            L+ +GDYLAI TL   EI +NI+       +     +       +              
Sbjct: 121 VLRLKGDYLAIVTLAFGEIIKNIINALYFGVDKNGWHFSLKDGTAVALGEGGKWIIKGAQ 180

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
                 +   + V + +  LS   I     +    A   IRDN+ A  S+       KL 
Sbjct: 181 GITGTPKYSNFTVGIILLLLSMLFIQHFIHSRTGRAVMAIRDNRIAAESIALPASKLKLL 240

Query: 234 AFAVSSAFIGMAGAFFAASRDRIS--PDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
            F +S+A  G+AG  +A +   +   P  F ++++I+++  V+LGG+ ++     A  +L
Sbjct: 241 CFTISAAIAGIAGVLYAHNLSSLQALPKNFGYNQSIMILVFVVLGGIGNMRGSILAAVVL 300

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
             + EL   +N Y                  +  + L +++L 
Sbjct: 301 TLLPELLRSLNDY---------------RMLIYAVVLIVMMLF 328


>gi|91786264|ref|YP_547216.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91695489|gb|ABE42318.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas sp. JS666]
          Length = 311

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 57/284 (20%), Positives = 116/284 (40%), Gaps = 15/284 (5%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
            +     QKY+  +    +I+ + A  L +++G  GLLS+       +GAY+  IL  + 
Sbjct: 3   AIPLFIQQKYLLHVISLAMIFGIAALSLQLLLGFTGLLSMGQAAFLGVGAYTAGILAVKL 62

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
                +    + ++SG   +I+ +P  + +G YL++ATL  +     + +  + +T G  
Sbjct: 63  QYPFLVCFVAAGVVSGLISLIL-VPITRLKGVYLSVATLGFTIAIHLVFLNEEWLTGGSQ 121

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G+            +                   +YY+ L +   S +    L  +    
Sbjct: 122 GLSSIPPPAIGSLAIGGEQ--------------GIYYLCLAVAIGSFAAFHLLVSSRFGR 167

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           A + I+ ++ A  +    +   K  AF  ++ F G AGA F      ++P+ F F ++I 
Sbjct: 168 ALQAIKLDEDAARASGINVTLYKSQAFVTAAVFTGWAGALFTYHNQYLNPNDFTFWKSIE 227

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           ++ +V +GG+ SL+        +  + E+   +  Y        
Sbjct: 228 IVIMVAVGGIGSLAGAVFGAFAVTLLPEVLGDLENYRMIIFGSL 271


>gi|291563028|emb|CBL41844.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           (TC 3.A.1.4.-) [butyrate-producing bacterium SS3/4]
          Length = 358

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 80/329 (24%), Positives = 145/329 (44%), Gaps = 23/329 (6%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + V   +++ + +G       +  + +   IYV+ A  L++ VG LG LSL     
Sbjct: 15  ITLGMVVAAWIIMEVLMGTGHVSSLLKGLLVPFCIYVIMAVSLNLTVGILGELSLGHAGF 74

Query: 74  YAIGAYSYVIL------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
             +GA+S  +            +S+ + I V A ++   G+++G+P L+ RGDYLAI TL
Sbjct: 75  MCVGAFSGALFSKCMKGTIDPTVSLVIAIFVGAAVAAVFGILIGIPVLRLRGDYLAIVTL 134

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              EI +N++       +             LG      +            +   + + 
Sbjct: 135 AFGEIIKNLVNAIFLGRDADGFHISFKDSMSLGLKDGGEVLIKGPQGITGTPQAATFTIG 194

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +  ++  I++ L  +    A  +IRDN+ A  S+   I   KL AF++S+A  G+AG 
Sbjct: 195 IILVLITLIIVMNLVNSRTGRAIMSIRDNRIAAESIGINITKYKLLAFSISAALAGVAGV 254

Query: 248 FFAASRDRIS--PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
            +A +   ++  P  F ++ +I+++  V+LGG+ S+     +T IL  + EL  G+N Y 
Sbjct: 255 LYAHNLTTLTALPKNFGYNMSIMILVYVVLGGIGSIRGSVISTVILYLLPELLRGLNNY- 313

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILM 334
                            +  I L L +L 
Sbjct: 314 --------------RMLIYAIVLILAMLF 328


>gi|71281258|ref|YP_270089.1| putative branched-chain amino acid ABC transporter permease
           [Colwellia psychrerythraea 34H]
 gi|71146998|gb|AAZ27471.1| putative branched-chain amino acid ABC transporter, permease
           protein [Colwellia psychrerythraea 34H]
          Length = 357

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 64/343 (18%), Positives = 135/343 (39%), Gaps = 27/343 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           +IF  +  ++  I  ++A+ +               Y  ++ IQI    + A GL+I+VG
Sbjct: 21  TIFETKTIRWVTIFTIIALCFA--------PLVVDGYFITLLIQISYLGIAALGLNILVG 72

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G +SL     +  GA++   L +   + ++L IP++  ++   GM+ G P+ + +G Y
Sbjct: 73  YTGQISLGHGAFFGFGAFASAWLNTSLHIPVFLCIPLAGFLTMGVGMMFGAPAARIKGLY 132

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LAIATL    I ++   +    + G +G        F                       
Sbjct: 133 LAIATLASQFIIEDFFARADWFSGGASGSMAEPVSLFGFAFDTDQ--------------- 177

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             YY+ L            L R+    A+  +RD+  +   +   +   +L +F +SS +
Sbjct: 178 SFYYIALFSLVFMFIWGCNLMRSRDGRAFVAVRDHYLSAEIMGVKLNKYRLLSFGISSFY 237

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG- 300
            G+ GA +A     +S + F    +I  ++++I+GG+ S+         ++ + E+    
Sbjct: 238 AGIGGALYAHYLGYVSAEGFTIMMSIQFLAMIIIGGLGSIKGTLMGVIFMVFLPEVLESG 297

Query: 301 ---MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
              M    + ++              + + +   ++     + 
Sbjct: 298 VGVMKMTDWGNIPMVVDGLAYIKEMAIGLVIIGFLIFEPEGIA 340


>gi|159184748|ref|NP_354418.2| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium
           tumefaciens str. C58]
 gi|159140036|gb|AAK87203.2| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium
           tumefaciens str. C58]
          Length = 590

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 57/326 (17%), Positives = 119/326 (36%), Gaps = 22/326 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            V  L L           +  ++   I +  + A GL ++ G  G+ S         GAY
Sbjct: 10  AVAALFLVAIFPLLPVPPFWVTLANNIGLASLVAIGLVLLTGVGGMTSFGQAAFCGFGAY 69

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  +L S YG S WL +P+S ++     + +GL +++  G YL + T+        +  +
Sbjct: 70  TTAVLTSAYGFSPWLTLPLSLLVGAVVALPLGLMTVRLSGHYLPLGTIAWGLAIYYLFGR 129

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
            + +     GI     L                    ++    +YY++       A    
Sbjct: 130 IELL-GRYDGISGIPPLS--------------LGGEALMSSSSIYYIIWIFVIAVAIGAQ 174

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  + +    R +R   +A  +    I  AKL+ F  ++    ++G  +A  +  I+P 
Sbjct: 175 NLLDSRVGRGIRALRGGSQAAEAFGVNIERAKLTVFVFAAVVAALSGWLYAHMQRSINPT 234

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F     I  + + ++GG   +       ++++ + E+   +      + + F       
Sbjct: 235 PFGLDMGITYMLMAVVGGSGRVVGAIFGASVVLVLKEVLQRVLPGLLGTSVNF------- 287

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTP 345
              +  + L L++ +    L  L   
Sbjct: 288 EMIVFGVLLVLILQLSRDGLWPLLER 313


>gi|293606117|ref|ZP_06688482.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292815572|gb|EFF74688.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 345

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 71/322 (22%), Positives = 131/322 (40%), Gaps = 17/322 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  L   L L    +  Y   +   + I +  A GL+I+ G  GL+SL       +GA
Sbjct: 24  VWLALLAASLVLFPFVADAYWLYLACLVAINIASATGLNILTGYTGLVSLGQAAFMGLGA 83

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  ++  R G  + + +    +++   G+++G+PSL+ +G YLAIAT+  S I   I  
Sbjct: 84  YTVAVMELRPGTPVLVNLLGGGVVAMVGGLLVGIPSLRVKGLYLAIATIAASFIAHFIFA 143

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W+             RL                    +     +Y++++ +  L     
Sbjct: 144 NWQFTGGTTGLQVPPARL----------------LGVDLDTSFKIYWLIVPVTVLMVLGA 187

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L RT I  A+  IRD   +   L   ++  KL +F +SS + G+AG  +A     ++P
Sbjct: 188 ANLFRTRIGRAFIAIRDRDISAEVLGIPLLRYKLLSFGLSSFYAGVAGGLWAYFFRVVTP 247

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F    +I  ++ +I+GGM S+         +  V EL   +   +           + 
Sbjct: 248 ESFPLIMSIFFLAAIIVGGMGSILGAILGAIFMTMVPELLK-LIVGWLPVGGDALRLVSP 306

Query: 319 RHTTLMVIALFLVILMRSHSLL 340
             T +  + +   ++   H L 
Sbjct: 307 VRTIVFGLLIVGFLIFEPHGLA 328


>gi|315638172|ref|ZP_07893354.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Campylobacter upsaliensis
           JV21]
 gi|315481708|gb|EFU72330.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Campylobacter upsaliensis
           JV21]
          Length = 350

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 58/335 (17%), Positives = 118/335 (35%), Gaps = 7/335 (2%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L  ++  L F+F+       Y  S+  QI I+++ A   +++ G  G  SL      A+G
Sbjct: 10  LIFLFLALAFIFISPKIFSDYGMSIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAVG 69

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   ++                +      +      +      L    L     F    
Sbjct: 70  AYVAALVLLSTEAKEEQFFYDG-INPFILALHSPSFIVALLAAGLCACLLSFILSFAVFR 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++   +     G  +  +L  L     +            I      Y   G+  ++  +
Sbjct: 129 VRGDYLAIVTLGFGIIIKLLALSFPTFTN----GSRGINEIPAYSNIYWTGGIAIIAVML 184

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           IL +  +    A + IRD++ A  ++     + K  AF  S+   G+ G   A     +S
Sbjct: 185 ILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFGTSAFLEGVGGGLLACLLTTVS 244

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL--KFDCS 315
           P+ F F     ++ I++LGG+ S +     + ++IG  E    ++ +     L      +
Sbjct: 245 PEQFDFLLTFQLLIIIVLGGLGSTTGAILGSVLVIGGAEWLRFLDEFKIQMDLFGAEIQT 304

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            +     +  + L LV+L     ++  +      +
Sbjct: 305 GHGLRMVVFSLILILVMLFARRGIMGDKELVEIFK 339


>gi|119025088|ref|YP_908933.1| branched-chain amino acid ABC-type transport system permease
           components [Bifidobacterium adolescentis ATCC 15703]
 gi|118764672|dbj|BAF38851.1| branched-chain amino acid ABC-type transport system permease
           components [Bifidobacterium adolescentis ATCC 15703]
          Length = 489

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 96/305 (31%), Gaps = 28/305 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I  L+  + + G+++V G+ GL S +      +G     +      + +      + +I
Sbjct: 209 IIFGLMLGLMSVGMNLVYGTTGLQSFSHGEQVTLGGLMAYVGTQMLHMPLIASAIFAIVI 268

Query: 103 SGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
               G I          R     +  +I++      L        G     +        
Sbjct: 269 GALTGFIQNEIVWGPLRRRHVGTMQQMIVTIGLSMALQYTFQFFFGGDIKGIV------- 321

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                      F    +  ++      L    +   + L+L +T +  A R + DN    
Sbjct: 322 -----KSVPDSFQLGPITTDMPTLVSALIAICVIVGVTLFLYKTRLGRATRAVSDNAALA 376

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +    +       + +S A   ++G       + IS +    +  +++ + V LGG+ +
Sbjct: 377 AASGINVDQVVRVVWILSCAMAALSGVLLGVYLNGISWNT-GATLILLMFAAVTLGGLGT 435

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
            +     + ++  V ++   +               N       +  L +V+L+R   + 
Sbjct: 436 ANGALIGSLVIGIVADMSSLVIP-------------NDMRYASALAILIIVLLVRPQGIF 482

Query: 341 RLRTP 345
             +  
Sbjct: 483 GKQQR 487


>gi|119717238|ref|YP_924203.1| inner-membrane translocator [Nocardioides sp. JS614]
 gi|119537899|gb|ABL82516.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Nocardioides sp. JS614]
          Length = 330

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 63/329 (19%), Positives = 132/329 (40%), Gaps = 8/329 (2%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
            G+  +Q    + G   ++Y + A GL++  G  GLL+       A+G Y+   + + +G
Sbjct: 3   FGSILTQTLQQAFGPLAIVYCLAAIGLNVHFGYTGLLNFGQAAFMAVGGYAMASVVATWG 62

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL--IKWKPITNGK 147
           LS+WL I V  +++    +++G+P+L+ R DYLAI T+  +E+ +  +  +       G+
Sbjct: 63  LSLWLGIVVGLVLTVVLALLLGVPTLRLRADYLAIVTIAAAEMLRQTVGSVTLLEYFGGQ 122

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
            G+      +         +        +   + ++  V   +  LS  ++  L R+   
Sbjct: 123 DGLNSFVGDFRALNPYSGSVGIPGI-VEWRANDFWVMTVGWILVALSCLVVWALMRSPWG 181

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
              + IR+++ A  SL   +   K+ +  +   F   AG  +  S+  + P  +      
Sbjct: 182 RVLKAIREDEDAVRSLGKNVYSYKMQSLVIGGLFGTFAGYIYGLSKAAVIPTDYATDTTF 241

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGM-----NFYYFNSLLKFDCSFNMRHTT 322
              +I++LGG   +      T I  G++                   +       +    
Sbjct: 242 FAYTILLLGGAARVFGPVVGTVIFWGLINFLDQFFRQAAAHDVIPQAIMNQNQAGLMRFI 301

Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLER 351
           ++ +AL L+++ R   +   R       R
Sbjct: 302 VLGLALMLLMIYRPQGIFGDRRELAIDGR 330


>gi|118589404|ref|ZP_01546810.1| putative ureashort-chain amide or branched-chain amino acid uptake
           ABC transporter permease protein, possibly fusion
           [Stappia aggregata IAM 12614]
 gi|118438104|gb|EAV44739.1| putative ureashort-chain amide or branched-chain amino acid uptake
           ABC transporter permease protein, possibly fusion
           [Stappia aggregata IAM 12614]
          Length = 540

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 88/297 (29%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       IGAY   ++      S   L   S  I+     +  
Sbjct: 261 AAIGLAITFGVMGVINMAHGEMVMIGAYVTFVVQEFIRSSAPGLFEYSLFIALPLAFLTS 320

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       +   +     + +L  W      +  +                     
Sbjct: 321 GLVGVAIER--GVIRWLYGRPLETLLATWGISLVLQQAVRSIFGPTNREVGNPDW-MSGA 377

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++++    + A ++L L++T      R +  N++   S+     +  
Sbjct: 378 FEIGQMTITYNRMWIIVFAMLVFAGLMLVLKKTPFGLYTRAVTQNRRMAASMGIRTPWID 437

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   A S+             I    +V+ GG+ +L         L
Sbjct: 438 AFTFGLGSGIAGIAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLVGAMTL 495

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             V +                           +++ + L I  R   L  L+  +  
Sbjct: 496 GVVNKFLEPYAGAVLGK-------------IFVLVFIILFIQKRPRGLFALKGRAVE 539


>gi|27376167|ref|NP_767696.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27349306|dbj|BAC46321.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 332

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 76/324 (23%), Positives = 130/324 (40%), Gaps = 30/324 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A+   ++  L +      +Y   +  Q  +  + A GL++ +G  G +SL       IG
Sbjct: 10  IALGLIVIAGLIIVPMNFNRYGLFILSQWAVMTIAAMGLNLTLGYAGQVSLAQGAFVGIG 69

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  I+ +     + + I V+ ++S   G ++G P+L+ +  YLA  TL  S +   + 
Sbjct: 70  AYAAAIMTTHGWP-LPVAILVAIVLSFGVGWVLGYPALRVQHHYLAFVTLAFSTLAFLVF 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                +T G  GI    R +F                      +  YYV LG   + +  
Sbjct: 129 RNESWLTGGIYGISNIPRPHFF--------------GIATNKPLPFYYVCLGSLAIVSLA 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           + WL R+    A+  +R+N     SL        L AFA+ SA  G+AGA +A     I 
Sbjct: 175 VWWLIRSPWGRAFMALRENPLRAQSLGIDTRRYTLMAFAIGSALGGVAGALYAPLTQYID 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F  S ++ ++ +VI+GG            I + + E       YY            
Sbjct: 235 PVPFNLSLSLDLLMMVIVGGAGFYFGPFLGAMIAVLLPEWLRFTEGYY------------ 282

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                L  IA+ L+++     +L 
Sbjct: 283 ---LMLYAIAVMLLLIWSPTGILG 303


>gi|254488248|ref|ZP_05101453.1| inner-membrane translocator [Roseobacter sp. GAI101]
 gi|214045117|gb|EEB85755.1| inner-membrane translocator [Roseobacter sp. GAI101]
          Length = 399

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 55/365 (15%), Positives = 123/365 (33%), Gaps = 34/365 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKS------QKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           K   +L ++A +     FL     +             +  +++I+ +FA G +I+ G  
Sbjct: 7   KDAGLLAIVAFLCIFAPFLLNPFPEGSAMAQFNAGYPDLMQRLVIFGIFAIGFNILFGLT 66

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G LS        +G+Y+ + +     +++   I VS +++G   +++G  SL+  G Y +
Sbjct: 67  GYLSFGHAAFLGVGSYAAIWMMKLLTMNVVPAIFVSVLVAGLFSLLVGWISLRRSGIYFS 126

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVA---------------DRLYFLGTTVRSLIR 168
           I TL  +++   +         G                               +     
Sbjct: 127 ILTLAFAQMSYALAYSVLTPITGGETGLQPKYTDPRILDGALPAGQSPRANLFGLDMKAT 186

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                  +V      YY+      L+  + + + R+ +    R ++ NQ+          
Sbjct: 187 TELRLGDWVFTFNAGYYIAAATMLLAFYLSIRIFRSPLGMMLRAVKSNQQRMNYTGLNSK 246

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
              L+AF +S  + G+AG    A   ++  +   ++ +  V+ + ILGG  +L       
Sbjct: 247 PYTLAAFVISGMYAGLAGGLLVAMDTQVGAERMFWTASGEVVLMTILGGAGTLIGPVLGA 306

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM-------------VIALFLVILMR 335
             +  +  +   +N         F           +              +   +V++  
Sbjct: 307 GFIKYMENIVSKINETVLEQWFAFLPDGLSDAMVAIVYPFVGKGWHLTLGLLFMMVVIFL 366

Query: 336 SHSLL 340
              L+
Sbjct: 367 PGGLV 371


>gi|227546614|ref|ZP_03976663.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Bifidobacterium longum
           subsp. infantis ATCC 55813]
 gi|312134008|ref|YP_004001347.1| livm [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482075|ref|ZP_07941099.1| branched-chain amino acid transport system/permease component
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|322689788|ref|YP_004209522.1| branched-chain amino acid ABC transporter permease [Bifidobacterium
           longum subsp. infantis 157F]
 gi|322691734|ref|YP_004221304.1| branched-chain amino acid ABC transporter permease [Bifidobacterium
           longum subsp. longum JCM 1217]
 gi|227212931|gb|EEI80810.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Bifidobacterium longum
           subsp. infantis ATCC 55813]
 gi|291516322|emb|CBK69938.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           (TC 3.A.1.4.-) [Bifidobacterium longum subsp. longum F8]
 gi|311773312|gb|ADQ02800.1| LivM [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916434|gb|EFV37832.1| branched-chain amino acid transport system/permease component
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456590|dbj|BAJ67212.1| branched-chain amino acid ABC transporter permease component
           [Bifidobacterium longum subsp. longum JCM 1217]
 gi|320461124|dbj|BAJ71744.1| branched-chain amino acid ABC transporter permease component
           [Bifidobacterium longum subsp. infantis 157F]
          Length = 362

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 70/341 (20%), Positives = 129/341 (37%), Gaps = 42/341 (12%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +    ++     +  +  YI  + +   I ++    L++ +G LG L+L C    A
Sbjct: 16  FIGILAAFGIVMALCESGLADSYIKGIMMTACIAIIMTTSLNLTIGVLGQLTLGCCGFEA 75

Query: 76  IGAYSYVILGSR---------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           IGAY   +                   L   +  +++   G+++G+P+L+  GDYLAI T
Sbjct: 76  IGAYVAALTSKYMVAAGIAIDPTARFLLTTLIGGVVACVFGILIGIPALRLHGDYLAIIT 135

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + I+   K                        L +     +   I      YV
Sbjct: 136 LGFGEIIRVIIQNLKVAGG------------------MGLDKGAAGQALIGIERTANLYV 177

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  ++  ++    R+    A + IRD++ A  +      + K+  FA+S+ F G+AG
Sbjct: 178 VFWIMVVTVVVLFMFGRSRYGRAVKAIRDDEIAAGASGLNTTYLKVLVFAISAFFAGIAG 237

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             FA     ++P M  +  +I  + +V+ GGM SL+    +   L  + EL      Y  
Sbjct: 238 GIFAQYIGSLNPTMAGWLNSINYVIMVVFGGMGSLTGSIVSAIGLTILPELLRAFADY-- 295

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                              + L LV++ R   +      S 
Sbjct: 296 -------------RMLAYSVVLVLVMIFRPQGIFGSWEFSL 323


>gi|113866318|ref|YP_724807.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113525094|emb|CAJ91439.1| ABC-type transporter, permease component: HAAT family [Ralstonia
           eutropha H16]
          Length = 358

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 79/345 (22%), Positives = 142/345 (41%), Gaps = 23/345 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +R ++      +   V   + F+ +    S+ +  ++ I  LI+ + A GL+I+ G
Sbjct: 18  QIFPIRQDR------IGFAVLMAVAFVAIPFVGSEYWFSAILIPFLIFSLAALGLNILTG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-WLLIPVSAMISGACGMIMGLPSLKFRGD 120
             G LSL      A+GAY+      R       L   ++ + +   G+  GLPSL+ +G 
Sbjct: 72  YAGQLSLGTAAFMAVGAYAAYNFQLRVEGMPVLLTFVMAGLSAALVGVAFGLPSLRIKGF 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL         L K+   +N  +   +               +        +   
Sbjct: 132 YLAVATLAAQFFVVWALTKFPWFSNNSSSGVI-------------TAQRLDLFGFAIDTP 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y  +L +  + A     L R+A   AW ++RD   A   +   ++  KL AFAVSS 
Sbjct: 179 LKKYLFVLAIVTVLALAAKNLVRSATGRAWMSVRDMDVAAEVIGIPLMRTKLLAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           + G+AGA +A      + PD F    +  V+ ++I+GG+ S+       A ++ +     
Sbjct: 239 YCGVAGALYAFCYLGSVEPDGFSLDLSFRVLFMIIIGGVGSILGSFLGAAFILLLPIFLD 298

Query: 300 GMNFYYFNSLLKFDCSFNMRH--TTLMVIALFLVILMRSHSLLRL 342
            +       L     +  + H    +    +   +++  H L RL
Sbjct: 299 NVLPSLAALLHLPFTNATVSHIQLMVFGGLIIFFLIVEPHGLARL 343


>gi|319783758|ref|YP_004143234.1| urea ABC transporter permease [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317169646|gb|ADV13184.1| urea ABC transporter, permease protein UrtB [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 537

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 99/319 (31%), Gaps = 18/319 (5%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           L    + + +        + ++ A GL+I  G +G++++       +GAY+  ++     
Sbjct: 236 LAFWDAGQNVWYGISLGSVLLLAAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQQVIR 295

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
            S   L   S +I+     ++             +   +     + +L  W      +  
Sbjct: 296 TSFPDLFDWSLVIALPLAFLVAALVGLIIER--GVIRFLYGRPLETLLATWGVSLILQQA 353

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +              S      F    +       ++L+    +   ++  ++RT     
Sbjct: 354 VRSIFGPTNQEVGNPSW-MSGSFNVGQLAITWNRLWILVFALAVFGILLYVMKRTPWGLQ 412

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R +  N++   S+     +     FA+ S   G+AG   A S+             I  
Sbjct: 413 MRAVTANRRMAASMGIRTPWVDALTFALGSGIAGIAGV--ALSQIDNVSPNLGRGYIIDS 470

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             +V+ GG+ +L         L  V +                          ++++ + 
Sbjct: 471 FMVVVFGGVGNLWGTLVGAFSLGIVNKFLEPYAGAVLGK-------------IVVLVLII 517

Query: 330 LVILMRSHSLLRLRTPSNF 348
           L I  R   L  L+  +  
Sbjct: 518 LFIQKRPRGLFALKGRAVE 536


>gi|326333440|ref|ZP_08199683.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Nocardioidaceae bacterium Broad-1]
 gi|325948745|gb|EGD40842.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Nocardioidaceae bacterium Broad-1]
          Length = 446

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 97/309 (31%), Gaps = 14/309 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           + + +  +  LI  +   G S++ G+ GL +         GA         +       +
Sbjct: 150 QNLRAGIVFALILCLAGLGFSLIFGTTGLSNFAHGELLTFGAVMAWSFDQIFKTGGLASV 209

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V      A  +      ++ +  +  +       I   I+     I       Y     
Sbjct: 210 SVIVAGVIAVVLGGVGGYVQDKVLWGPLRRRGTGLIAMMIISIGLAIFLRYLFQYFYGSS 269

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
               +      R   +    +        +++       ++ LWL ++ +  A R + DN
Sbjct: 270 TRSLSQYNGQQREQHWYYLGLSLADREAVIVVIAIVTITAVCLWLAKSRMGKAMRAVSDN 329

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                S    +     +A+ +  A   +AG  +A      S    +     ++++ V LG
Sbjct: 330 PALAASSGLRVDGVITNAWVIGGALTALAGVLYAMQLQVNSFMGMRILL--VILAAVTLG 387

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++      + ++  V EL            +              ++ + +++L+R 
Sbjct: 388 GLGTIWGALVGSMVIGLVYELGPLFGVPTSIKEIGP------------LLIMIVILLVRP 435

Query: 337 HSLLRLRTP 345
             +L  +  
Sbjct: 436 QGILGRKER 444


>gi|294339433|emb|CAZ87792.1| putative ABC-type branched-chain amino acid transport system,
           permease component [Thiomonas sp. 3As]
          Length = 354

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 77/339 (22%), Positives = 140/339 (41%), Gaps = 23/339 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +R ++      L      L+ F+ +    S   + ++ +  LI  + A GL+++VG
Sbjct: 18  QIFPIRQDR------LFIGAVLLIAFVAVPLLGSDYLLRALLVPSLILALAAIGLNVLVG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
             G +SL      A+GAY+   ++    G+ + + + ++ +I+   GM+ GLPSL+ RG 
Sbjct: 72  YCGQISLGTGAFMAVGAYAAFNLMVRLPGMPLLIALVLAGLIAALAGMVFGLPSLRIRGL 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL        +      +TNG +   V                        +   
Sbjct: 132 YLAVATLAAQFFSDWVFAHVPWLTNGSSSGSVTAPQLQ-------------VFGFVIDSP 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           I  Y   L +  + A ++  L R      W   RD   A   +  + + AKLSAFAVSS 
Sbjct: 179 IRKYLFCLAILSVLALLVKNLVRGRKGREWMATRDMDVAASVIGISPVRAKLSAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            +G+AGA +A        P  F    ++ ++ ++I+GG+ S+       A ++ +     
Sbjct: 239 IVGIAGALWAFVHLGSWEPAAFNIDLSLKLLFMIIIGGLGSVMGSLFGAAFIVLLPIFLN 298

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +  +    L       +        + + L ++   H 
Sbjct: 299 RLLSFL--GLQASTSFISHLELMTFGVLIVLFLIAEPHG 335


>gi|288959300|ref|YP_003449641.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288911608|dbj|BAI73097.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 315

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 66/323 (20%), Positives = 122/323 (37%), Gaps = 30/323 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++    +   L A     +   + I      +   GL++++G  G +SL     + IGAY
Sbjct: 12  LLALAAVIAVLPAFLPNNFYLDIAILAGFNAVVCVGLNLLIGYAGQISLGHAGFFGIGAY 71

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  +L   YG    L +   A+  G    ++  P L+ +G YLA+ATL +  I   +L  
Sbjct: 72  ASGVLVGSYGWPPVLALLAGAVFVGLLAFLVAKPILRLKGHYLAMATLGIGIIVSIVLRT 131

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +T G  G+ V                 FR     +  E   Y+V+  +      + L
Sbjct: 132 ESGLTGGPDGMMVEP---------------FRIFGVELYGEKVWYWVVGLLLVGVVWLSL 176

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  + +  A R +  ++ A   +       K+  F +S+ F  +AG+ FA     I+P 
Sbjct: 177 NLIDSPMGRALRAVHGSEVAAEVVGVDTARFKVLVFVLSAVFASVAGSLFAHYTGLITPA 236

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
              F ++I ++++V+ GGM S         +L  + +       Y               
Sbjct: 237 KADFFKSIELVTMVVFGGMASTFGAVVGAVVLTLLPQALTVFQDY--------------- 281

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
              ++   L   ++     LL  
Sbjct: 282 QQIVLGGILMATMVFMPKGLLPT 304


>gi|291294540|ref|YP_003505938.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
 gi|290469499|gb|ADD26918.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
          Length = 358

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 67/316 (21%), Positives = 126/316 (39%), Gaps = 21/316 (6%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +     ++    +   ILIY +   GL+I  G  GL+S+       +GAY+  +      
Sbjct: 40  ILPLFLERSQVLVLNFILIYAIAVLGLNITTGYAGLISVGQAAFMGVGAYTVALSA--PS 97

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L  WL IP+    +   G I+G+PSL+ +  YL +ATL   EIF  ++ +   +  G A 
Sbjct: 98  LPFWLTIPLGGFTAAIIGFIVGIPSLRVKHLYLVLATLAFQEIFVWVVGRSPALAQGAA- 156

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                           +  F      F  +  F YYV+L +  L       L R     A
Sbjct: 157 ------------IPVEMRNFLGLEIGFRNHNYFWYYVILFVLVLMVMAWRNLLRGKYGRA 204

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              +RDN +A  ++       KL AFA+ + + G+AG   A  +  +  + F  S ++ +
Sbjct: 205 LIAVRDNDRAADAMGMDPGRTKLMAFALGAFYGGVAGGLLAYMQRAVVVEEFTLSRSVAL 264

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT------TL 323
           +++ I+GG+ ++       A +  +      ++ +  ++      +              
Sbjct: 265 LAMAIVGGLGTVVGSLLGPAFIEFLRLYVERLSEWMKSNAFIQSITPAGVDVASALLPLS 324

Query: 324 MVIALFLVILMRSHSL 339
             + + L ++     L
Sbjct: 325 FGLVIVLFLIFEPRGL 340


>gi|160941736|ref|ZP_02089063.1| hypothetical protein CLOBOL_06632 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435233|gb|EDP13000.1| hypothetical protein CLOBOL_06632 [Clostridium bolteae ATCC
           BAA-613]
          Length = 328

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 66/287 (22%), Positives = 124/287 (43%), Gaps = 14/287 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             V  L++  FL       Y   +  ++LI ++   GL+ + G  G ++L     +A+GA
Sbjct: 12  FAVGALVIGAFLPIFIKNDYYMMVLNRVLINIIVVLGLNFITGLTGQMNLGTAGIFALGA 71

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           YS  +      L+ WL +  + ++    G  +G PSL+ RG YL++ T+   E+ + ++ 
Sbjct: 72  YSSALFTRYTNLTPWLGLIAAVIMGILIGRGLGYPSLRVRGVYLSLTTIGFGEVVRLLIS 131

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                T G  GI            ++S                  YY+ L    ++  I 
Sbjct: 132 NTPKFTGGTQGIRNIRPYNIGSYQIQSQKEM--------------YYLFLVFTAIAFFIA 177

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +  +     ++++RDN +A       I   K+ AF V+S F  +AGA +A     I+P
Sbjct: 178 WRIAYSKWGRIFKSLRDNVEAVEMSGVDIASCKIKAFTVASIFGTVAGAMYAHYMGYINP 237

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
             F    +   + ++++GG+ S+      +AI+  + E+   +  YY
Sbjct: 238 STFNLDLSTNYVVMLMVGGLGSVVGTIFGSAIVTILPEMLRFLGNYY 284


>gi|169350915|ref|ZP_02867853.1| hypothetical protein CLOSPI_01691 [Clostridium spiroforme DSM 1552]
 gi|169291977|gb|EDS74110.1| hypothetical protein CLOSPI_01691 [Clostridium spiroforme DSM 1552]
          Length = 311

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 69/329 (20%), Positives = 139/329 (42%), Gaps = 41/329 (12%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  K   I  +  ++   +L   + +     Y   + +   I ++ A  L++  G LG L
Sbjct: 3   KQFKKVGISFIGTILLYFILTFLISSGIISNYWLGIIMIAGINIILASSLNLATGYLGQL 62

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           +L      ++GAY   +      L     + + A+I+   G+I+G+P+L+ +GDYL I T
Sbjct: 63  TLGHAGFMSVGAYVSALCSIHLELPFIASLLMGAIIAAIIGIIIGIPTLRLKGDYLCIIT 122

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L  +EI + I++    ITNG  G+    R                            + +
Sbjct: 123 LAFNEIIRVIMVNL-SITNGSKGLVGIPRSTN-------------------------FAI 156

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +     ++  +I  + ++    A  +IR+++ A         + K+ AFA+S+ F G+AG
Sbjct: 157 VFFSAAVTVFVIYSIVKSRHGRAIISIREDETASELSGIPTTYYKILAFAISAFFAGLAG 216

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             +A     ISP +F +++++ ++ IV+LGGM +      A  ++  + E     + Y  
Sbjct: 217 GLYAHYITVISPKVFDYNKSVEILVIVVLGGMGNWKGSIIAAIVMTILPEYLRAFSQY-- 274

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMR 335
                           L    L + ++++
Sbjct: 275 -------------RMLLYAAILIIAMILK 290


>gi|159043951|ref|YP_001532745.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12]
 gi|157911711|gb|ABV93144.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12]
          Length = 402

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 57/368 (15%), Positives = 127/368 (34%), Gaps = 35/368 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGAT-------KSQKYIDSMGIQILIYVMFAWGLSIVV 60
           L K D +L L+     +L    L          +       +  + +I+ +FA G +I+ 
Sbjct: 4   LEKKDTVLLLIVAGLTMLAPFLLNPFPEGSGMAQFNAGYPDLMQRFVIFGIFAIGFNILF 63

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G LS        +G+Y+ + +     +++   I ++ +++G   +++G  SL+  G 
Sbjct: 64  GLTGYLSFGHAAFLGVGSYAAIWMMKLLTMNVIPAIIMAIVLAGLFSLLVGWISLRRSGI 123

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVA---------------DRLYFLGTTVRS 165
           Y +I TL  +++   +         G                               +  
Sbjct: 124 YFSILTLAFAQMSYALAYSVLTPITGGETGLQPKVNDPRLLDPALAEGATPSANLFGLTM 183

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
              +      ++      YY+   +  +S  + + + R+      R ++ NQ+       
Sbjct: 184 KSSYELNVGGWLFTFNAGYYLAAVIMLISFYVAIRIFRSPFGMMLRAVKSNQQRMNYTGL 243

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                 L+AF +S  + G+AG    A   ++ P+   ++ +  V+ + ILGG  +L    
Sbjct: 244 NSKPYTLAAFVISGMYAGLAGGLMVAMDTQVGPERMFWTASGEVVLMTILGGAGTLIGPV 303

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVI 332
               ++  +  +   +N    +    F                        + I   LV+
Sbjct: 304 LGAGMIKYMENIISKINETILHQWFAFLPDGMEDALVAMVYPFIGKGWHLTLGIIFMLVV 363

Query: 333 LMRSHSLL 340
           +     L+
Sbjct: 364 IFLPGGLV 371


>gi|150016638|ref|YP_001308892.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052]
 gi|149903103|gb|ABR33936.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052]
          Length = 352

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 74/349 (21%), Positives = 146/349 (41%), Gaps = 45/349 (12%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A++  + L LF+       Y   +     IY +    L+++ G  GL SL      A+G
Sbjct: 10  IALIAIVFLLLFVANNSLDSYKIRILNLCAIYTVLGLSLNLINGFTGLFSLGHAGFVAVG 69

Query: 78  AYSYVILGS-------------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           AY+  +L                        +   + + ++ ++S    +++G P+L+ +
Sbjct: 70  AYTTALLTMSEKVKNQNFFMEPLMAPFNHISVPFIVALLIAGLLSAFIAVLIGAPALRLK 129

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           GDYLAI TL  +EI + ++   + +TNG  G+     +                      
Sbjct: 130 GDYLAIVTLGFAEIIRIVITNIQGLTNGALGLRGIPHMTN-------------------- 169

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                 Y   G+  ++  I+L L  ++   A ++IR+++ A  S+  ++   K+  FA+ 
Sbjct: 170 -----LYWSFGVAIVTIIILLSLINSSYGRALKSIREDEIAAESMGISLFKHKVIGFAIG 224

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           + F G+ G         I P+MFKFS    ++ I+++GGM S++    +  I+  + E  
Sbjct: 225 AFFAGVGGGLLGNLMGTIDPNMFKFSLTFNILLIIVIGGMGSVTGTVISAFIVTILGEAL 284

Query: 299 CGMNFYYFNSLLKFDCS-FNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
             ++      L  F  S        +  I L +++L   H ++  +  S
Sbjct: 285 RFLDMEKQFDLGIFSFSGIPGLRMVIFSILLMIIVLFFRHGIMGTKEFS 333


>gi|110632838|ref|YP_673046.1| inner-membrane translocator [Mesorhizobium sp. BNC1]
 gi|110283822|gb|ABG61881.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Chelativorans sp. BNC1]
          Length = 346

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 73/333 (21%), Positives = 129/333 (38%), Gaps = 30/333 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   L   L      +  Y   +   + +YV+   GL+I++G  G  +        IGA
Sbjct: 11  LIYGGLAAALLAVPLLTNGYTQYVVNLVTVYVVLGVGLNILLGYAGQFAFANAAFMGIGA 70

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y   IL S+ GL  W+ IP + +++   G    +P+++    YLA+ T   +E+   + I
Sbjct: 71  YITAILSSQLGLPFWVCIPAAGVVTALIGTACAVPAMRMASIYLALVTFAFAELMVWVFI 130

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            WK +TNG  GI V+    F          ++      +                   + 
Sbjct: 131 NWKGVTNGSNGIGVSAPDLFGYVFRGDQRLYYLLLPCCLT---------------MLWLA 175

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + ++ I  ++  IR+++         +   K+ AF +S+ F G+ GA FA +   + P
Sbjct: 176 SRILKSYIGRSFVIIRESEIVARCNGIDVSRTKMIAFGLSAFFGGVGGALFAYTVGLVLP 235

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F   + +I I+IV+LGGM SL+       +L  + E                   F  
Sbjct: 236 QSFGLFQLVIHIAIVVLGGMASLAGAIIGALLLTTLPEFLR---------------DFQS 280

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               +   AL +V +     +    T    L R
Sbjct: 281 LQEVMFGTALVIVAIFMPRGIAGALTRFGILPR 313


>gi|220925175|ref|YP_002500477.1| ABC transporter-like protein [Methylobacterium nodulans ORS 2060]
 gi|219949782|gb|ACL60174.1| ABC transporter related [Methylobacterium nodulans ORS 2060]
          Length = 586

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 108/306 (35%), Gaps = 22/306 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +  ++     +  +   GL ++ G  G++S    +   IGAY+  +L  R GL  WL +
Sbjct: 24  PFWLTLLTYAGLSAIVVIGLVVLTGIAGIMSFGQAMFVGIGAYASALLSLRLGLPPWLTL 83

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P +   +G   + +G  +L+  G YL + T+  +  F   L           G+     L
Sbjct: 84  PAAVAAAGLAALCVGAITLRLSGHYLPLGTIAWTIAFFYALGNTDAF-GRFDGLAGLPPL 142

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             + +     +++++     L   +   L R     A R ++  
Sbjct: 143 TLF--------------GTPITSGPSLFWLVWLSLALCILLTRRLLRARAGRAIRALKGG 188

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             A  +        ++ AF  ++   G++G  +   +  I+P  F  + +I  + + +LG
Sbjct: 189 AVAAEAFGIDTGRTRIVAFTYAAMLAGLSGWLYVQVQRAINPTPFGLNASIEYLLMTVLG 248

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  S+        ++  + +    +      +   F          +  +   L++    
Sbjct: 249 GAGSVWGGVFGATLVTVLKDQLQNVLPLLLGTQGNF-------EAIVFGLLFVLILQRAP 301

Query: 337 HSLLRL 342
             L  L
Sbjct: 302 DGLWPL 307


>gi|157376266|ref|YP_001474866.1| inner-membrane translocator [Shewanella sediminis HAW-EB3]
 gi|157318640|gb|ABV37738.1| inner-membrane translocator [Shewanella sediminis HAW-EB3]
          Length = 357

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 65/326 (19%), Positives = 131/326 (40%), Gaps = 19/326 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V    +    L       Y  ++ IQI    + A GL+I+VG  G +SL     +  GA
Sbjct: 30  LVAILAIAAACLAPLVLDGYFLTLFIQISYLGIAALGLNILVGFTGQISLGHGAFFGFGA 89

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           ++   L + + + + L IP++  ++ A GM+ G+P+ + +G YLAIATL    I ++   
Sbjct: 90  FASAWLNTSFNIPVALCIPMAGFLTMAVGMMFGMPAARIKGLYLAIATLAAQFIIEDFFA 149

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           + +  + G +G   A                              YY+ L          
Sbjct: 150 RAEWFSGGSSGSMAAPVNLLGFEFDTDQ---------------SFYYIALFALVFMYIWG 194

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+    A+  +RD+  +   +   +   +L +F +SS + G+ GA +A     +S 
Sbjct: 195 CNLMRSRDGRAFVAVRDHYLSAEIMGVKLNKYRLLSFGISSFYAGIGGALYAHYLGYVSA 254

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG----MNFYYFNSLLKFDC 314
           + F    +I  ++++I+GG+ S+         ++ + E+       M +  + ++     
Sbjct: 255 EGFTIFMSIQFLAMIIIGGLGSIKGTLMGVIFMVLLPEMLETGVGLMKYTDWGNIPMVTD 314

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLL 340
                    + + + L ++     L 
Sbjct: 315 GLAYIKEMAIGLVIILFLIFEPEGLA 340


>gi|313672857|ref|YP_004050968.1| amino acid/amide abc transporter membrane protein 2, haat family
           [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939613|gb|ADR18805.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Calditerrivibrio nitroreducens DSM 19672]
          Length = 313

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 70/327 (21%), Positives = 133/327 (40%), Gaps = 29/327 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L  + +  +  +        ++  S+ I ++I  + A  L+I+ G  G++SL     Y
Sbjct: 4   LNLFYLSFLAIAIVLFYIFVDNQFYKSILIYVMINAINASMLNILFGYTGVISLGQAAFY 63

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IGAY+  IL   +G +  L I +  +I+     ++G P+LK  G YLA+ATL    I  
Sbjct: 64  GIGAYTTGILTVHFGYNPLLTILIGIVIASFVAFVVGYPTLKLHGHYLAMATLGFGMIMY 123

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  ++   T G +G+    +L   G ++ +  +F              Y  +    F+ 
Sbjct: 124 ILFNEFSDYTGGPSGLVGIPKLSLFGFSLDNEDKF--------------YVFISIFFFIF 169

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           + ++    ++ +S   + I++++ A  S    +   KL  F V +A   + G+ FA    
Sbjct: 170 SILLELFDKSYMSYKLKFIKESEFASKSFGVNVSRVKLIVFVVVAAITSLTGSVFALYSG 229

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ISP  F    +I +  +  +GG+ S+        +L    EL      Y          
Sbjct: 230 FISPISFNLKYSIDIFIMATVGGLGSIVGGTLGATMLTAFPELITNFEDY---------- 279

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  I L ++I+     +  
Sbjct: 280 -----EMIVYGILLLIIIMFFPQGIAG 301


>gi|218887838|ref|YP_002437159.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218758792|gb|ACL09691.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 330

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 73/321 (22%), Positives = 133/321 (41%), Gaps = 31/321 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             + + + +       Y   + + I +Y + A  L+I++G  GL  +     YA+GAY  
Sbjct: 10  AGIAVVVAVLPLLLDPYWTDVFVSIGLYSVLALSLNIILGQAGLFHMGHAAFYAVGAYVT 69

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN-ILIKW 140
            I  + +G+ +   +P + + +    M++  P +  RGDYL I T+ + EI +  ++   
Sbjct: 70  AIANTMWGVPVLWAMPFAGLAAALFAMVVARPIIHLRGDYLLIVTIGIVEIVRIALINNV 129

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G  GI+   R    G  +   + F              YY++      S  +   
Sbjct: 130 FGLTGGANGIFGISRPMLFGFKIAKPVHF--------------YYLVWAYVACSILLFRR 175

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  +    A   I+++  A       I   KL AF + + + GM G  +AA    ISP+ 
Sbjct: 176 LENSRFGRALNYIKEDDTAAEGSGVNIASYKLWAFVLGAFWAGMTGTIYAAKMTIISPES 235

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F F E++++ +IVILGG  S   +     +LIG+ E                   F    
Sbjct: 236 FSFWESVVLFAIVILGG-GSNRGVLLGAFLLIGLPEFFR---------------EFASAR 279

Query: 321 TTLMVIALFLVILMRSHSLLR 341
                +A+ ++++ R   +L 
Sbjct: 280 MLAFGLAMVVMMIFRPQGMLP 300


>gi|39937081|ref|NP_949357.1| putative branched-chain amino acid ABC transport system permease
           LivM [Rhodopseudomonas palustris CGA009]
 gi|39650939|emb|CAE29462.1| putative branched-chain amino acid ABC transport system permease
           protein livm (liv-I protein m) [Rhodopseudomonas
           palustris CGA009]
          Length = 315

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 75/340 (22%), Positives = 142/340 (41%), Gaps = 35/340 (10%)

Query: 3   IFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
           +      +   IL  LAVV  +L  LF        Y   +   + +  + A GL+I++G 
Sbjct: 1   MMPNLFGRRSVILIALAVVMAVLPLLFP-----SSYYFRVASLVWVSALAAIGLNILMGK 55

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G +SL     + IGAY+  I  +  GL+  L + V A++S     ++G P L+ +G YL
Sbjct: 56  AGQVSLGHAGFFGIGAYAVAIGPAHLGLNALLAVLVGALLSALLAFLVGRPILRLKGHYL 115

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           AIATL +  +   ++      T G  G+ V     F      S                 
Sbjct: 116 AIATLGLGVLVAMVITTESGWTGGPDGMPVPKLSLFGWRISGSNTW-------------- 161

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y++  G+  +     L L  T    A+R + D++ A  +    +   KL AF +++ + 
Sbjct: 162 -YWITAGLLLIGTWFALNLDDTPTGRAFRALHDSEIAARTAGVHVERFKLQAFVIAAVYA 220

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
            +AG+  A     ++PD   F  ++ ++++V+LGG+ S+       A+L+ + +L     
Sbjct: 221 SIAGSALAMMNGFVNPDQAGFLHSVELVTMVVLGGLGSIVGSIVGAAVLVVLPQLLTVFQ 280

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            Y                  L+ + + + ++     ++ +
Sbjct: 281 DY---------------EHFLLGLIIIVSMIFMRDGMVPM 305


>gi|291287421|ref|YP_003504237.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809]
 gi|290884581|gb|ADD68281.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809]
          Length = 315

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 70/323 (21%), Positives = 136/323 (42%), Gaps = 31/323 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L   L L          ++     IY + A  + IV+G  G+  +   + + +GAY  
Sbjct: 10  IILFTCLALFPLVDNPRWLTVITTFCIYSVVALSVDIVLGRAGMFDMGHALFFGLGAYIT 69

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-IKW 140
            IL   +G ++ + IP   +I     +++  P +  RGDYL +AT+ M+ +F+  L    
Sbjct: 70  AILNVHFGYNVLVAIPFVIIIPAIIAIVISSPIVHLRGDYLLVATVGMNIVFEQALKNNL 129

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G  GI+  +   F                 F+   + +YY+   +   +  II  
Sbjct: 130 FGLTGGPNGIFGVNAEVFGF---------------FLDEPLPIYYIAFALLLFTLLIIRN 174

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L ++ +  A   ++++  A  S+     F ++ AF++ +A  G+AG  F+     +SP+ 
Sbjct: 175 LEKSKVGRALHYVQEDSLASESIGINARFYRVFAFSLGAAIAGLAGFVFSIQYAAVSPEA 234

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F F  ++I  +IV++GG  S+  I   T I+  + E+                  F    
Sbjct: 235 FNFMTSVIFFAIVLVGGKASIPGILAGTFIMFVLPEVFR---------------EFATAR 279

Query: 321 TTLMVIALFLVILMRSHSLLRLR 343
             +   A+ L +++R   +   +
Sbjct: 280 YFVFGFAMILSMILRPEGMFPAK 302


>gi|170692535|ref|ZP_02883697.1| inner-membrane translocator [Burkholderia graminis C4D1M]
 gi|170142191|gb|EDT10357.1| inner-membrane translocator [Burkholderia graminis C4D1M]
          Length = 360

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 66/338 (19%), Positives = 132/338 (39%), Gaps = 33/338 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L++Y  +L  L VV  L L L  G         S+  ++L++ + A G ++++G  GLLS
Sbjct: 26  LHRYRFLLLALLVVCILPLTLRSG---------SLATEVLVFALAALGCNLLLGHTGLLS 76

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
               I + +G+YS  ++ ++  L + + +  + ++  A   ++G  S++ RG Y  + TL
Sbjct: 77  FGQGIFFGLGSYSAGLVLTKAALPVPVALLAALVVGAAAAALVGWFSIRQRGTYFVMLTL 136

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              ++F  +      +T G  G+    R           +R F      +      Y  +
Sbjct: 137 AFGQLFYFLAYTTPELTGGDNGLLDIPRPA---------LRLFGHELIALTSPWQYYGFV 187

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  +   +++ +  +        IRDN+    ++   +   KL AF +S A  G+AGA
Sbjct: 188 AVLFLIVFWLLMRVSHSVFGRTLLAIRDNEARAAAVGYDVKRFKLMAFVISGAVTGLAGA 247

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A            +  + +++ + ++GG  +L       A  +   +    +   +  
Sbjct: 248 LHALMTGIAPLSNIDYHTSEMILVMTVIGGTGNLFASVLGAAFYVLFADWLSTLWPRW-- 305

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                          L+ I L  V L     L  L   
Sbjct: 306 -------------LLLLGIVLMAVSLYMQRGLWGLGER 330


>gi|22537720|ref|NP_688571.1| branched-chain amino acid ABC transporter permease [Streptococcus
           agalactiae 2603V/R]
 gi|76787286|ref|YP_330200.1| hydrophobic amino acid uptake ABC transporter permease LivM
           [Streptococcus agalactiae A909]
 gi|76799158|ref|ZP_00781341.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae 18RS21]
 gi|22534609|gb|AAN00444.1|AE014263_23 branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae 2603V/R]
 gi|76562343|gb|ABA44927.1| hydrophobic amino acid uptake (HAAT) family ABC transporter,
           permease protein LivM [Streptococcus agalactiae A909]
 gi|76585488|gb|EAO62063.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae 18RS21]
          Length = 317

 Score =  103 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 78/335 (23%), Positives = 140/335 (41%), Gaps = 42/335 (12%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              + V+  LL+ + +       Y   +   I I V+ A GL+++VG  G  SL      
Sbjct: 11  WLAIVVLDYLLISVLISMGIFNLYHIQIIETIGINVILAVGLNLIVGCSGQFSLGHAGFM 70

Query: 75  AIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           AIGAY+  I+G +        + I V  +++G   + +G+P+L+ +GDYLAIATL ++EI
Sbjct: 71  AIGAYAVAIIGVKMPTYVGFLIAILVGTLVAGGIALGVGIPTLRLKGDYLAIATLGVAEI 130

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            + +L+    ITNG AGI                                 + ++ G+  
Sbjct: 131 IRILLVNGGDITNGAAGIMGIPPFT-------------------------TWSLVYGVAV 165

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +S  + +   R+ +      IR+++ A  S+       K+  F   +    +AG+  A  
Sbjct: 166 VSLILAMNFLRSPLGRNTIAIREDEIAAESMGVDTTKVKVIVFVFGAILASIAGSLQAGY 225

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              + P  F F  ++ V+ IV+LGG+ S++    A  +L  +  L               
Sbjct: 226 VGTVMPKDFSFMMSVNVLIIVVLGGLGSMTGTVLAAILLGLLNMLLQDY----------- 274

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                     +  +AL L+++ R   LL  +  + 
Sbjct: 275 ----ASVRMIIYALALILIMIFRPSGLLGTKELTL 305


>gi|292655064|ref|YP_003534961.1| putative branched-chain amino acids ABC transporter permease
           [Haloferax volcanii DS2]
 gi|291371552|gb|ADE03779.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haloferax volcanii DS2]
          Length = 393

 Score =  103 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 56/338 (16%), Positives = 126/338 (37%), Gaps = 3/338 (0%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I  +L  V+P +       +   +   S+   ILI+ +FA G  +++G  GLLS     
Sbjct: 35  GITAILVAVFPYIFARAPVVSGVLQGYQSLATLILIWGIFAIGFDLLLGYTGLLSFGHAA 94

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            +   AY+  I+         +++    + +     ++G  SL+  G Y +I TL  +++
Sbjct: 95  FWGGAAYAAGIVAKNVSGDPIVMVVSGTLFAVLLAWVLGFLSLRRSGIYFSILTLAFAQM 154

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           F  +            G      +          +         ++   ++Y  +     
Sbjct: 155 FYYMAASPLAFL--TNGENGLTGVEVGSFLGVIHLEADIPSVGGMLLGTWLYAFVGAFFV 212

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            + ++   +  +     +R IR+N++    +   +   KL AF +S AF G+AG+ F   
Sbjct: 213 GAVAVAYRILNSPYGMVFRAIRENEQRAEFVGFNVWRYKLMAFIISGAFAGIAGSLFTIH 272

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLK 311
              +      ++E+  ++ + +LGG  S+        + + +  +   +       + + 
Sbjct: 273 GAYVPLQSLFWTESGDIVVMTVLGGAGSMFGPVLGVGLYLYIENIVSTIQALTIPFTGIV 332

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
               F      L+ +   +V+ +    L  + T    L
Sbjct: 333 LVRDFGFYWHLLLGLVFVVVVWVVPDGLWGILTRLREL 370


>gi|284042128|ref|YP_003392468.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283946349|gb|ADB49093.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 325

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 69/326 (21%), Positives = 133/326 (40%), Gaps = 7/326 (2%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            +   L  G      +   +G+   IY +F  GL + VG  G+++       AIGAY+  
Sbjct: 5   AVPFALSFGGLTEVSFWTGVGVLAGIYALFTLGLQLNVGFSGIVNFGQAGFMAIGAYAMA 64

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           IL    G + +    ++ + + A  +++G+ SL+ R DY +IATL  +E  +        
Sbjct: 65  ILVVDAGFAFFPAALLAILCAVAFALVVGMSSLRLRADYFSIATLAAAEAIRMFAQNATS 124

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  GIY  D   ++  +                  + +  V+     +   ++  L+
Sbjct: 125 LTGGNQGIYGYD-STWVDISRTIEGWLGDLGVGDGGGLVPLLLVVWAFVLVLVVVLRHLQ 183

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+      R IR+++ A  +L       +L + A+S+A   +AG F A +   ++P  F+
Sbjct: 184 RSPWGRVLRAIREDEDAARALGKNATSYRLQSLAISAALAAVAGIFLALNLSFVNPQAFE 243

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                I  + +ILGG+ S   +A    ++  ++E    +N          D         
Sbjct: 244 PQATFIGYAALILGGLASYWGVAFGAVVMWTLLEASRFINLPLE------DTQIASLRFI 297

Query: 323 LMVIALFLVILMRSHSLLRLRTPSNF 348
           ++ + L L++  R   +   R     
Sbjct: 298 VVGLLLILLMAFRPQGIFGNRKEMVL 323


>gi|138895172|ref|YP_001125625.1| branched chain amino acid ABC transporter permease [Geobacillus
           thermodenitrificans NG80-2]
 gi|196248246|ref|ZP_03146947.1| inner-membrane translocator [Geobacillus sp. G11MC16]
 gi|134266685|gb|ABO66880.1| Branched-chain amino acid ABC transporter (permease) [Geobacillus
           thermodenitrificans NG80-2]
 gi|196211971|gb|EDY06729.1| inner-membrane translocator [Geobacillus sp. G11MC16]
          Length = 345

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 62/306 (20%), Positives = 124/306 (40%), Gaps = 28/306 (9%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y   M     I+++  +GL++  G  G LSL     +A+GAY+  IL  + GL  W  
Sbjct: 27  NGYYLHMMTMSFIWMIAVYGLNLFAGYTGYLSLAHAGFFAVGAYTLGILTVKVGLPFWGA 86

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
             +S   +   G+ +GL +L+ +  + AI TL +  I   ++ KW  +T G  G      
Sbjct: 87  FALSCAFTSLLGLAIGLVALRTKEHFFAIYTLCVGYIIYLVIDKWDSLTGGVRGFIGIPA 146

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                    +  YY++L   F    ++  L  +     +  IR+
Sbjct: 147 PSD-------------IGPLSFQTPVAQYYLVLFFLFAVIFVMYRLVYSLTGRTYIAIRN 193

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++   +L  + +  KL++F +S  F  +AGA +A+    + PD+   +     ++ +++
Sbjct: 194 SEELALTLGISTMKNKLASFVLSVFFTSLAGALYASFIRFLGPDIAYVTVMFDFLTYLLV 253

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ +L+     T ++  + +    +  Y                  +    L L+I+  
Sbjct: 254 GGIGTLAGPVVGTLLITFLSQQLQFLQDY---------------RMLIFGPVLTLLIIFY 298

Query: 336 SHSLLR 341
            H +  
Sbjct: 299 PHGIAG 304


>gi|332530486|ref|ZP_08406427.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
 gi|332040055|gb|EGI76440.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
          Length = 606

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 101/334 (30%), Gaps = 29/334 (8%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +   +  ++ +     + L  G      Y+ ++ I+   + + A  + I+ G  G L+ 
Sbjct: 21  ARAASLHHVVLLAAMGAVLLVAGPWMFDTYLLNILIKAFFFAIAAITVDILWGYTGYLTF 80

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                + IGAY+  +  +  G         + +  G   +     +              
Sbjct: 81  GQSAFFGIGAYAAGLTFTHAG----FSASTALLAMGTTLLGCAAVAGLVGWLSFYRGASP 136

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                 ++++                 L   G +            +F       Y+   
Sbjct: 137 FFATVISLVLPIVLTQ-----------LLLSGGSFTGSSSGLTGYPTFDGSIEAWYWAAG 185

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  ++  I   L R+        IRDN+     L       K +         G+AG  
Sbjct: 186 SLLTVAGVIGWVLVRSDAGRMLLAIRDNEARCTYLGINTSRVKTTLLIAMGVMAGIAGFG 245

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +++    ++P++  F+    +I  V LGG  +L     +  ++                 
Sbjct: 246 YSSFSGVVAPELTGFALGTELIIWVALGGRGTLWGPLASGVLVNVATAYLSS-------- 297

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 S       ++  A  +VI++    L+ L
Sbjct: 298 ------SMPFAWQLILGAAFVVVIVLFPQGLIPL 325


>gi|57168886|ref|ZP_00368016.1| branched chain amino acid ABC transporter, permease protein
           [Campylobacter coli RM2228]
 gi|57019722|gb|EAL56408.1| branched chain amino acid ABC transporter, permease protein
           [Campylobacter coli RM2228]
          Length = 346

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 77/359 (21%), Positives = 131/359 (36%), Gaps = 47/359 (13%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L  +   + F+ L       Y   +  QI IY+  A   +++ G  G  SL      
Sbjct: 6   ISALVYIVLAIAFIMLAPQFFDGYGIGILNQIAIYITLAVSYNLINGVTGQFSLEPNGFI 65

Query: 75  AIGAYSYV--------------------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
           A+GAY+                      I+ + +  S  L + V+   +    +I+    
Sbjct: 66  AVGAYAAALVLLSSEQKLDLFSLEDPNPIILALHTNSFILALLVAGFSACVLSLILAFAV 125

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
            + RGDYLAI TL    I Q + I +   TNG  G+     L                  
Sbjct: 126 FRVRGDYLAIVTLGFGIIIQKLAINFPSWTNGSMGLNGIPLLSN---------------- 169

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                     Y   G+  +S  +IL L  +    A + IRD++ A  ++     + K  A
Sbjct: 170 ---------LYWTGGVAIISVILILNLVYSKFGRAMQAIRDDEDAASAMGVNTFWTKTLA 220

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F  S+   G+ G         +SP+ F F    +++ I++LGG+ S +       ++IG 
Sbjct: 221 FGTSAFLEGVGGGLLVCLLASVSPEQFGFEFTFMLLIIIVLGGLGSTTGAILGAILIIGG 280

Query: 295 VELCCGMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            E    ++        L     S          + L LV+L     +   R  ++F +R
Sbjct: 281 REWLRFLDEMQIKIDFLGIDMGSMPGLRMVGFSLILILVMLFARREIFGDRELNSFFKR 339


>gi|197118568|ref|YP_002138995.1| branched-chain amino acid ABC transporter membrane protein
           [Geobacter bemidjiensis Bem]
 gi|197087928|gb|ACH39199.1| branched-chain amino acid ABC transporter, membrane protein
           [Geobacter bemidjiensis Bem]
          Length = 320

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 64/320 (20%), Positives = 130/320 (40%), Gaps = 29/320 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
               L+ L      S  Y+ ++ + + +  + A GL++++G  G +SL     + +GAY 
Sbjct: 9   FVFCLVVLLAPLPLSGSYLTNVLVFVGVNSILALGLNLLLGFAGQISLGQAAFFGLGAYG 68

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +L S Y  + W+ + V A+   A    +G P L+ +G YLA+ATL +  I      + 
Sbjct: 69  SGVLTSAYAFNPWVAMVVVALAVAAFAFAIGFPVLRLKGHYLAMATLGVGVIANIAFNET 128

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G +G+     L     T  + ++               YY++ G   +   + L 
Sbjct: 129 VDLTGGPSGLSGIPNLAIGSFTFDTDLKN--------------YYLVWGFALVMILLALN 174

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  +      R I D++ A   +       K+  F +S+    +AG+ +      ISP  
Sbjct: 175 LVNSRFGRGLRAIHDSEVAARVMGVNARLMKVQVFTLSAFISAIAGSLYCHVMTFISPTS 234

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F F+ ++ +++++++GG+ S+        +L  + E+      Y                
Sbjct: 235 FGFNTSVELLTMIVIGGLGSVYGSILGALLLTMLPEILRTFQDY---------------D 279

Query: 321 TTLMVIALFLVILMRSHSLL 340
             +    L ++ +     L+
Sbjct: 280 IIVYGSLLIVMTIYMPGGLV 299


>gi|49474236|ref|YP_032278.1| high-affinity branched-chain amino acid transporter, permease
           protein [Bartonella quintana str. Toulouse]
 gi|49239740|emb|CAF26122.1| High-affinity branched-chain amino acid transporter, permease
           protein [Bartonella quintana str. Toulouse]
          Length = 352

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 64/339 (18%), Positives = 116/339 (34%), Gaps = 7/339 (2%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K          +  L+ FLF        Y   +   I I  + A  L+++ G  G+ S
Sbjct: 1   MTKSASTFLSCISILVLIGFLFYADNHFNDYTLRVINLIAINAILAISLNLIYGFTGMFS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      AIGAY   IL          ++ +   I+     +     +      L  A +
Sbjct: 61  LGHAGFMAIGAYVCAILLLSPEQK--EMMWILEPIAEPLHYLQLPFFVAVVISGLCAAVI 118

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +      + +    +     G     R+     T  +                + Y  L
Sbjct: 119 GLLVALPILRLGGDYLGIATLGFAEIIRIVITNATSLTNGSLGIKGIPQNATLWWNYGWL 178

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                    ++    R+   N  R IRD++ A  ++     F +  +F V + F G+ GA
Sbjct: 179 AFTVTFIVLLL----RSNAGNVLRAIRDDEIAAKTMGINAFFYRSFSFTVGAFFAGIGGA 234

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             AA    I P MF F     ++ IV+ GG+ S++    ++ I+  ++E    +   +  
Sbjct: 235 LTAALISTIDPKMFNFLLTFNILMIVVAGGLGSITGSVISSVIVTAMLEWLRIIESPFDL 294

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
             +            +  + L ++IL     LL  R  S
Sbjct: 295 GFIYIP-EIPGLRMVVFSLLLLVIILFWRKGLLGQREFS 332


>gi|56696726|ref|YP_167087.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56678463|gb|AAV95129.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 365

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 67/325 (20%), Positives = 131/325 (40%), Gaps = 13/325 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +   LL  +         +       +LI+ +   GL ++ G  G  SL      A G
Sbjct: 22  LGLYMILLAIVVAAPWLLDAFYLGELTNVLIWAIAGMGLMVLTGHTGQASLGHAAFLAFG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+ VIL         +  P++ +I+G  G  + +P+L+  G YLAI TL +S +  +I+
Sbjct: 82  CYANVILLEAGVP-FIIAFPLAGVITGLIGATVAIPALRLHGIYLAIFTLALSILVDDII 140

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +  +P T G +G YVA             I  F          +  Y+++L +  + A  
Sbjct: 141 VLSEPWTGGVSGKYVA------------GIDLFGLTIDRWGTPMLFYWLVLAVTVIVALG 188

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            + L R+ +  ++  +RD++ +  ++   I  AK  +F +S    G AGAF        +
Sbjct: 189 YINLLRSPLGRSFIAVRDSEVSAQAMGVDIARAKTISFGLSCMVTGWAGAFMGLFAGAFN 248

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            + F    +I ++ ++++GG+ S+        ++  + +       Y          +  
Sbjct: 249 NETFSVVISIELLMMIVIGGLGSIHGAFFGAIVIGFLPQFLSIAKEYVGAVFGGSTVAIP 308

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                +  + L   IL+    +   
Sbjct: 309 GLEFGIFGMILIAFILLEPMGIYGR 333


>gi|121603907|ref|YP_981236.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120592876|gb|ABM36315.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 524

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 93/310 (30%), Gaps = 17/310 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I S      I ++ A GL+I  G +G++++       IGAY+  ++   +   +      
Sbjct: 231 IFSGISLGSILLLVALGLAITYGLMGVINMAHGELMMIGAYATYVVQGLFQKYLPGAFDW 290

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +     +             ++   +     + +L  W      +  +        
Sbjct: 291 YLLAAVPVAFLASALMGAVLER--SVIRFLYGRPLETLLATWGISLMLQQLVRSIFGAQN 348

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G      +         +        ++     +   +   + RT +    R +  N+ 
Sbjct: 349 VGVENPVWMSGGVQVLGNLSLPYNRLVIIGFAIAVLLGMGWLIGRTRLGLFVRGVTQNRP 408

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +          AFA+ S   G+AG   A S+             +    +V+LGG+
Sbjct: 409 IASCMGVNTARIDTYAFALGSGIAGLAGC--ALSQVGNVGPDLGQGYIVDAFMVVVLGGV 466

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L+    A   L  + +   G                       +++ + + I  R   
Sbjct: 467 GQLAGTVYAAMGLGILNKFLEGWTGAVLAK-------------IAVLVIIIIFIQKRPQG 513

Query: 339 LLRLRTPSNF 348
           +  ++  S  
Sbjct: 514 IFAMKGRSAE 523


>gi|260223447|emb|CBA34023.1| hypothetical protein Csp_B21960 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 496

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 93/310 (30%), Gaps = 17/310 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I S      I ++ A GL+I  G +G++++       IGAY+  ++   +   +      
Sbjct: 203 IFSGISLGSILLLVALGLAITYGLMGVINMAHGELMMIGAYATYVVQVLFQKYLPGAFDW 262

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +     +             ++   +     + +L  W         +        
Sbjct: 263 YLLAAVPVAFMTSALVGAALER--SVIRFLYGRPLETLLATWGISLMLMQLVRTLFGAQN 320

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G    S +         +        ++     +   +   + +T +    R +  N+ 
Sbjct: 321 VGVENPSWMSGGVQLLGNLSLPYNRLIIVAFAVAVLVGVWFLIEKTRLGLFVRGVTQNRP 380

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +          AFA+ S   G+AG   A S+             +    +V+LGG+
Sbjct: 381 IASCMGVNTARIDTYAFALGSGIAGLAGC--ALSQVGNVGPDLGQGYIVDSFMVVVLGGV 438

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L+    A   L  + +   G                       +++ + + I  R   
Sbjct: 439 GQLAGTVYAAMGLGILNKFLEGWTGAVLAK-------------IAVLVFIIVFIQKRPQG 485

Query: 339 LLRLRTPSNF 348
           +  ++  S  
Sbjct: 486 IFAMKGRSAE 495


>gi|269792251|ref|YP_003317155.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269099886|gb|ACZ18873.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 347

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 57/335 (17%), Positives = 118/335 (35%), Gaps = 7/335 (2%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   ++   A +  L LFL+        Y   +   I I  + A  L+++ G  G+ SL 
Sbjct: 5   KKRDLILNGACLALLGLFLWWADGHLDGYKIQVLNLIAINAILAVSLNLIYGFTGMFSLG 64

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+GAY+  +L         + I    +   +        +       +  A   +
Sbjct: 65  HAGFMAVGAYTCALLILPPIQKEMIYILDPLIWPLSVMQAPFFVA--VLAGGIMAALFGL 122

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 + +    +     G     R+ F      +            I      +   G
Sbjct: 123 VIAMPVLRLGGDYLGIASLGFAEIIRVVFTNAKSVTN----GALGIKGIPPYANLWWNWG 178

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              ++  +++ L R+   N  + IRD++ A  ++       ++++F + + F G+ GA  
Sbjct: 179 WFLITLYVVVSLLRSNFGNCLKAIRDDEVASRAMGIDTFRYRVTSFTIGAFFAGVGGALM 238

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +    I P MF F     V+ IV+ GG+ S++     + ++  ++E    +        
Sbjct: 239 GSLITTIDPKMFTFLLTFNVLMIVVAGGLGSVTGSVLGSVVITILLEWLRFVENPIDLGP 298

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +            +  +AL  +IL R   ++  R 
Sbjct: 299 IHIP-GIPGMRMVIFSLALLFIILFRREGMMGQRE 332


>gi|119899733|ref|YP_934946.1| putative branched-chain amino acid transport permease [Azoarcus sp.
           BH72]
 gi|119672146|emb|CAL96060.1| putative branched-chain amino acid transport permease [Azoarcus sp.
           BH72]
          Length = 355

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 74/343 (21%), Positives = 143/343 (41%), Gaps = 22/343 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +R ++      +      +  F  +    +Q ++ ++ I +LI+ + A GL+I+ G
Sbjct: 18  QIFPIRQDR------IGFAAILVFFFGVVPLVANQYWLQAILIPVLIFSLAAIGLNILTG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYG-LSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
             G LSL      A+GA+       R   +   + I +  + + A G+  GLPSL+ +G 
Sbjct: 72  YAGQLSLGSAAFMAVGAFGAYNFMLRIDGMPFLVGIVLGGLCAAAVGVAFGLPSLRIKGF 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL         L+K+   +N  +   +  +   +                     
Sbjct: 132 YLAVATLAAQFFIVWALVKFPWFSNHASSGVITAQRVEILGYAFD-------------SP 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y + L +  + A +   L R+    +W  +RD   A   +    + AKL+AFAVSS 
Sbjct: 179 VSKYLLTLAVVAVLALLAKNLVRSTTGRSWMAVRDMDVAAEVIGIRPMHAKLTAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           + G+AGA +A      + P+ F    +  ++ ++I+GG+ S+       A ++ +     
Sbjct: 239 YCGVAGALYAYTYLGTVEPEGFSLDLSFKILFMIIIGGVGSIMGSFFGAAFIVLMPIFLN 298

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +    F   +      +     +    +   +++  H L RL
Sbjct: 299 VVMHSVFGGAMPAGMG-SNLELIIFGGLIIFFLIVEPHGLARL 340


>gi|154245447|ref|YP_001416405.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154159532|gb|ABS66748.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 336

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 73/317 (23%), Positives = 134/317 (42%), Gaps = 24/317 (7%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           L       Y+ ++ I  L+Y   +   +I+ G  G +SL   + + IGAY+  +L   Y 
Sbjct: 37  LPLGIRDVYLQNVLILTLLYAAVSQSWNILGGYCGQISLGHALYFGIGAYAASVLYVNYD 96

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +  W  + V  ++S A  + +G  + + +G Y AIATL+++EI   ++  W     G  G
Sbjct: 97  IVPWFGMVVGGLLSAALAVALGFMTFRLKGHYFAIATLVIAEIGLVLVHNW-DFVGGALG 155

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           I                     +   F   ++  +Y+ LG+  +   +   +  +     
Sbjct: 156 IQWPFGTDSF------------WTLQFARDKVPYFYIALGLLVVVWLVTYLIENSRWGFW 203

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
           WR ++D+ +A  SL   +  +KL+A AVS+ F  + G F+AA    I P+        ++
Sbjct: 204 WRAVKDDPEAAESLGVEVFRSKLAAAAVSAFFTAVGGGFYAAFVSYIDPESVMSFRFSLL 263

Query: 270 ISI-VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
            ++  +LGG+ +L       AILI + E+                 S +     +    +
Sbjct: 264 FALPAVLGGIGTLWGAPLGAAILIPLTEITRSY----------LGGSGSGLDLIIYGALI 313

Query: 329 FLVILMRSHSLLRLRTP 345
            +V L +   LL L T 
Sbjct: 314 MVVALAKPEGLLSLFTR 330


>gi|326775493|ref|ZP_08234758.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|326655826|gb|EGE40672.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 386

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 74/336 (22%), Positives = 134/336 (39%), Gaps = 16/336 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            V    L L +      ++    G+  +   + A GL+++ G+ G LS+      A+GAY
Sbjct: 36  AVLIGSLLLLVLPFYLDRFWLQAGLFAMAAAIGAIGLNMLTGATGQLSMGHAFFLAVGAY 95

Query: 80  SY-----------VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
            Y               +  GL  WL   ++ +++GA G I    + + RG YL IATL 
Sbjct: 96  GYSVLAGESGTENGHALTGLGLPTWLAAILAVLLAGAAGGIFSPIAGRLRGAYLGIATLA 155

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +  I Q++L     +T G  G  V     F  T   S +     P        +   + L
Sbjct: 156 LIFIGQHVLFNAGSLTGGYNGRNVPPLSVFGFTFDDSELVVAAVPFGSSEKLWYAGLLAL 215

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  L A  +L  R      A   IRD++ A   +   +   +   F +SS + G+AG  
Sbjct: 216 LLSALFARGVLRGR---PGRAMNAIRDHRIAAGVMGVPVARYRAGVFVLSSMYAGLAGVL 272

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY--YF 306
            A    R  P+ F    ++  ++++++GG+ S++      A +  + ++    + +    
Sbjct: 273 LALVFQRTVPEYFGMILSLEYLAMIVIGGLGSVAGAVVGAAFVSLLPQVFTHYSDFLPLV 332

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           ++      +       L   A+  V+L     L RL
Sbjct: 333 SAPGTGGLAPGEASRYLYGAAVVAVVLFLPGGLARL 368


>gi|237737372|ref|ZP_04567853.1| branched-chain amino acid transporter permease livM [Fusobacterium
           mortiferum ATCC 9817]
 gi|229421234|gb|EEO36281.1| branched-chain amino acid transporter permease livM [Fusobacterium
           mortiferum ATCC 9817]
          Length = 325

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 74/340 (21%), Positives = 140/340 (41%), Gaps = 45/340 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +  +L ++   LL   + +    +Y  ++ I I I ++ A  L+I VG LG +++   
Sbjct: 9   YALTLILVIIGYFLLTGLISSGMISRYQTTVMIFICINIILAVSLNITVGCLGQITIGHA 68

Query: 72  IAYAIGAYSYVILGSRYG----LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
              ++GAY+  +              + + V  +++G  G+++G+P+L+  GDYLAI TL
Sbjct: 69  GFMSVGAYTAALFAKTGIVEGLPGYIIALIVGGIVAGIVGIVIGIPALRLNGDYLAIITL 128

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              EI + +L+++   T G  G+    R    G                         V+
Sbjct: 129 AFGEIIR-VLVEYFDFTGGAQGLRGIPRFNKFG-------------------------VI 162

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  L   ++  L  +    A   IRD++ A  +      + K  AF VS+ F G+AG 
Sbjct: 163 YIIMVLCVMMMFSLMTSRHGRAILAIRDDEIASGASGINTTYYKTFAFTVSAIFAGVAGG 222

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A +   +    F F+ +I ++ +V+LGGM S +    +   L  + E+    + Y   
Sbjct: 223 IYAHNLGILGARQFDFNYSINILVMVVLGGMGSFTGSFLSAIALTILPEVLREFSDY--- 279

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  + L L ++ R   LL  +    
Sbjct: 280 ------------RMIVYSLLLILTMIFRPTGLLGRKEFQI 307


>gi|212702449|ref|ZP_03310577.1| hypothetical protein DESPIG_00466 [Desulfovibrio piger ATCC 29098]
 gi|212674110|gb|EEB34593.1| hypothetical protein DESPIG_00466 [Desulfovibrio piger ATCC 29098]
          Length = 344

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 58/332 (17%), Positives = 108/332 (32%), Gaps = 7/332 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  +A++    L L         Y   +   I I  + A  L+++ G  GL SL      
Sbjct: 8   LLNIALIVIFGLALTQAEAYMGDYQIYILKLIFINAILALSLNLIYGFTGLFSLGHAGFM 67

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AIGAY   +          + I    +   +        ++      L            
Sbjct: 68  AIGAYVGALCTLLPEQKEIMWILDPIIWPFSVLHTPFWVAVI--AGGLVAMIFAFIIAVP 125

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    +     G     R+  +  T  +               +  Y   +     +
Sbjct: 126 VLRLGDDYLGIATLGFAEIIRVVIVNATSITNGSLGIKGIPGEATLLTCYIWTVI----T 181

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             ++  L  +   N  R IRDN+ A   +   +   K+ +F V + F G+ GA   +   
Sbjct: 182 LVVLSRLIFSNFGNVLRCIRDNEIAAGVMGINVFRYKVLSFCVGAFFAGVGGALLGSHLS 241

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            I P MF F     V+  V+ GG+ SL+       I+  ++E    +       + +   
Sbjct: 242 TIDPKMFNFLLTFNVLMFVVAGGLGSLTGSLLGATIVTILLEWLRAIEEPMDFGVFEIP- 300

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                   +  + L  +IL R   ++  R  +
Sbjct: 301 GIPGMRMVVFSLILLAIILFRREGIMGTREIT 332


>gi|254438351|ref|ZP_05051845.1| ABC transporter, ATP-binding protein [Octadecabacter antarcticus
           307]
 gi|198253797|gb|EDY78111.1| ABC transporter, ATP-binding protein [Octadecabacter antarcticus
           307]
          Length = 603

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 52/335 (15%), Positives = 112/335 (33%), Gaps = 26/335 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +L++   ++  +      L      +     Y+  +    +I+ +    L ++ G  GLL
Sbjct: 4   KLHRRSGLVFPILATLIALAI----SGSLDPYLAFVATSWIIFGLLGLSLDVIWGRGGLL 59

Query: 67  SLNCVIAYAIGAYSYVILGSR----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           SL     Y +G Y   ++       +G+++   +P +A+        +G      R   L
Sbjct: 60  SLAQTAFYGLGGYFGAVIAINMAPSFGMTLVWALPAAAVFGALIAAALGYIIFYSRMGEL 119

Query: 123 AIATLIMSEIFQNILIKWKP-------ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
               L  +       +              G  G+     +          ++     ++
Sbjct: 120 QSTILSYTFTLLLWSVTQTFKLDVGEATIGGDNGLSNIPGIILGFGAEAGKLKPNGAFAT 179

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
            V+    +Y+              WL R+        IR + +    L   I   ++  F
Sbjct: 180 VVVVSAAVYF-----------FTHWLMRSNFGKVVDCIRIDIEKTELLGYDIRKIQVLNF 228

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
           A S A  G+AGA FA   + ++P +F   E +++   V++GG+ +L+       ++  + 
Sbjct: 229 AYSGAIAGIAGALFALWANYLNPSIFSVQEALLIPIYVLVGGLGTLAGPFLGAIVIGALS 288

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
               G       +L+       +           L
Sbjct: 289 FWLGGGAAGGQTTLILGAILILLVLFLQNGFLGAL 323


>gi|121607887|ref|YP_995694.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121552527|gb|ABM56676.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 357

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 56/306 (18%), Positives = 120/306 (39%), Gaps = 20/306 (6%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            +++    I +L +   A   +++ G +G +S    +   +G Y  V+L +  GLS W+ 
Sbjct: 31  DEFLIHSLIMVLYFAYLASAWNLMCGYVGQVSFGHSVFSGVGGYCSVLLLTGIGLSPWIG 90

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + +  + + +  + +G  +++ RG Y A+ ++  +EI +  L     +            
Sbjct: 91  MLLGGLAAASLALAIGSCTMRLRGPYFALTSIAFAEIIRIWLENTDIVFGIH-------- 142

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                  +   +    +       +   YY+++GM  L  +I   + R+ +    + IR 
Sbjct: 143 -LKGAEGLSVPLLGTSWAMFQFESKQPYYYIIVGMLVLVMTITWLMERSRLGVCLKAIRG 201

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENIIVISIVI 274
           ++ A  SL        L+A A+S+    + G+F+A     I+P+       +I +  + I
Sbjct: 202 DRDAAESLGIDPTRYTLTALALSAFMTALGGSFYAQFIRFINPERNMGTELSIDMALMSI 261

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +GG  ++         L  + E+                  F   H  L  + L + +L 
Sbjct: 262 IGGQGTVFGPLVGALFLAPLAEITRSY----------LGGQFAGLHLVLYGLVLIMAVLY 311

Query: 335 RSHSLL 340
               LL
Sbjct: 312 LPKGLL 317


>gi|253584208|ref|ZP_04861406.1| branched-chain amino acid transport system permease livM
           [Fusobacterium varium ATCC 27725]
 gi|251834780|gb|EES63343.1| branched-chain amino acid transport system permease livM
           [Fusobacterium varium ATCC 27725]
          Length = 323

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 71/336 (21%), Positives = 139/336 (41%), Gaps = 45/336 (13%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +L  +   +L   +GA    +Y  ++   I I ++ A  L++ VG LG +++      +
Sbjct: 13  FILLTILYFILTGMIGAGFISRYQTNILTLICINIILAVSLNVTVGCLGQITIGHAGFMS 72

Query: 76  IGAYSYVILG----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           +GAY+  +              L + +  +++   G+I+G+P+L+  GDYLAI TL   E
Sbjct: 73  VGAYAAALFAKSGIVEGIPGYILALIIGGIVAAIIGIIIGIPALRLNGDYLAIITLAFGE 132

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I + +LI++   T G  G+    R    G                         V+  + 
Sbjct: 133 IIR-VLIEYFSFTGGAQGLRGIPRFNKFG-------------------------VIYIIM 166

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
             S  ++  +  +    A  +IR+++ A  +      + K  AF +S+AF G+AG  +A 
Sbjct: 167 AASVMMMFSVMTSRHGRAILSIREDEIASGASGINTTYYKTFAFTISAAFAGVAGGVYAH 226

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               +    F ++ +I ++ +V+LGGM S +    +   L  + E+  G + Y       
Sbjct: 227 YLGILGARQFDYNYSINILVMVVLGGMGSFTGSILSAIALTILPEVLRGFSDY------- 279

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                      +  + L + ++ R   LL  +    
Sbjct: 280 --------RMIVYSLLLIMTMIFRPTGLLGRKEFQI 307


>gi|163793664|ref|ZP_02187639.1| ABC transporter ATP-binding/permease protein [alpha proteobacterium
           BAL199]
 gi|159181466|gb|EDP65981.1| ABC transporter ATP-binding/permease protein [alpha proteobacterium
           BAL199]
          Length = 573

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 67/335 (20%), Positives = 129/335 (38%), Gaps = 22/335 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
            R ++ D +    A +    + +         Y   +   + IY + A G  +V G LGL
Sbjct: 2   TRFDRRDGVYLAAAALGIGGVVIA-----GDAYALRIASLVGIYAIAAIGYQLVFGRLGL 56

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           LSL     + +GAY+  +L    GL + + +  + ++      ++ LP  +    Y+A+A
Sbjct: 57  LSLAQGAFFGLGAYASALLTVSAGLPVPVGLAAAVVVPALAAAVIALPIARLESHYVALA 116

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL ++++        +  T G  GIY    +     T+  L       ++ V+   ++  
Sbjct: 117 TLGLAQLALLAATNLE-FTGGANGIYGVPPIVTNSITIGPLDVGSVTIAALVVPGGWVTL 175

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA-FFSLNTTIIFAKLSAFAVSSAFIGM 244
           + +    L+A ++         +A     DN      +L      A+L  FAV+    G+
Sbjct: 176 ISVWFGVLAALLVARAVTRGDRSAVLATLDNAPHAAAALGLNGTTARLVLFAVAGGLGGL 235

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG   A     +SP +  F   + +++I ++GG  S        A+LI + E+   +   
Sbjct: 236 AGGLQAHGLGVVSPAVVGFEVMVTILAIAVIGGRGSPVGAVLGAALLIPLPEVFRFLEGS 295

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           Y                    + L   I++    L
Sbjct: 296 Y---------------LIAYGVVLLAAIILMPRGL 315


>gi|114567620|ref|YP_754774.1| branched-chain amino acid ABC transporter permease [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
 gi|114338555|gb|ABI69403.1| branched-chain amino acid ABC transporter, permease protein
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
          Length = 298

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 66/316 (20%), Positives = 130/316 (41%), Gaps = 41/316 (12%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y   + I + I ++ A GL+++ G  G LS+      +IGAY+  IL  ++G S  + 
Sbjct: 13  DPYYLRIMILLGINIILALGLNLITGVTGQLSMGHAGFMSIGAYTSAILSMQFGFSYLMA 72

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +   A ++   G ++G+P+L+  GDYLA+ T+  +EI +   + ++P             
Sbjct: 73  LLTGAAVAAFFGFLIGIPTLRLEGDYLAMVTIGFAEIIRVFFLNFEPGGRAV-------- 124

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                 I +   +  +  +  +  ++   L ++ +  A+  IR+
Sbjct: 125 ------------------GLSGIPQHTNFITVWLIALIIIALNTRLLKSRMGRAFYAIRE 166

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N+ A  S        K+ AF   S   G+ G  ++     I+P  F F ++I ++++VIL
Sbjct: 167 NEIAAASTGIDTTRLKILAFTAGSFLGGLGGGLYSHYMYYINPQDFGFMKSIELLNMVIL 226

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S+      + IL    E+   +  Y                       L ++++ R
Sbjct: 227 GGMGSIPGTILGSFILTLAPEMLRIVAEY---------------RLLFYGALLVILMIFR 271

Query: 336 SHSLLRLRTPSNFLER 351
            + +L      +  +R
Sbjct: 272 PNGILGDVRIYDLKKR 287


>gi|160895529|ref|YP_001561111.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160361113|gb|ABX32726.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 361

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 73/338 (21%), Positives = 133/338 (39%), Gaps = 24/338 (7%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
              + +        AV    +  L L       Y+  + ++ +I  +FA  L ++VG  G
Sbjct: 23  PAEMPQRACRWQACAVPLACVALLALAGPWWSDYLSGLVVKTMILAIFALSLQLLVGGTG 82

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           L+SL       +GAY+ V+     G S+  ++  + + SG   +++GL SL+ RG Y  +
Sbjct: 83  LVSLGHAAFMGLGAYAAVLSAGNEGGSLPAMLGWALLASGGYALLVGLLSLRTRGIYFIM 142

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL         ++    I  G  GIY+  R       +                    Y
Sbjct: 143 VTLAF-AQMAYFVVHDTGIGGGSDGIYLMARPALGAIDME--------------IPRVQY 187

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           YV+L    L  + +  LR++    A   IR N++   +   T    KL+AF ++    G+
Sbjct: 188 YVVLAALVLVYAFLAGLRQSRFGAALAGIRVNEQRMRAAGFTTYGYKLAAFVLAGMLAGV 247

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG   A     ++P++  +  +  V+ +VILGG+ SL      T   I + E+       
Sbjct: 248 AGFLLAVRDAVVNPELLSWHHSGEVLLMVILGGLGSLRGAVLGTVAFIALKEVLST---- 303

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                              + +A+ +++ +    L+ L
Sbjct: 304 -----HAIVGPMADHWQLSLGLAIIVLVALLPKGLMGL 336


>gi|282882311|ref|ZP_06290942.1| high-affinity branched-chain amino acid transport system permease
           protein BraE [Peptoniphilus lacrimalis 315-B]
 gi|281297861|gb|EFA90326.1| high-affinity branched-chain amino acid transport system permease
           protein BraE [Peptoniphilus lacrimalis 315-B]
          Length = 331

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 70/340 (20%), Positives = 142/340 (41%), Gaps = 45/340 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +  LL +    ++          +Y  ++   + I ++ A  L+I VG+LG ++L   
Sbjct: 9   YILAFLLLIGLYGIILFLNRQGIVNRYSLTVLRMVAINIILATSLNITVGNLGQITLGHA 68

Query: 72  IAYAIGAYSYVILG----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
              +IGAYS  +              L +     ++   G+I+GLP+L+ +GDYLAI TL
Sbjct: 69  GFMSIGAYSAALFAKSAIVPGMAGYILSLFFGGFVAFIFGIIIGLPALRLKGDYLAIVTL 128

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              EI + +LI++   T G  G+     +                             ++
Sbjct: 129 AFGEIIR-VLIEYFNFTGGAQGLSGIPMMKSFD-------------------------II 162

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  +  +++  +  +    A  +IR+++ A  +    + F K  AF++S+ F G+AGA
Sbjct: 163 YVIMIICVTLMYSVMTSRHGRAVLSIREDEIASEASGINVTFYKTFAFSLSAFFAGLAGA 222

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A +   I   +F ++++  ++ +V+LGGM S +    +  +L  + E+      Y   
Sbjct: 223 IYAQNIGVIDAKIFDYNKSFDILVMVVLGGMGSFTGSIISATVLTIIPEILRSFASY--- 279

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  + L ++++ R   LL  +  S 
Sbjct: 280 ------------RMVIYSLVLIVMMMFRPVGLLGRKEFSL 307


>gi|170740369|ref|YP_001769024.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168194643|gb|ACA16590.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 344

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 69/318 (21%), Positives = 128/318 (40%), Gaps = 24/318 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                  Y+ ++ I  L+Y   A   +I+ G  G +SL   + + IGAY   +L   YGL
Sbjct: 41  PYGIRDVYLQNVLILTLMYAALAQSWNILGGYCGQISLGHALYFGIGAYFTSVLFVTYGL 100

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +    + S    +++G P  +  G Y +IAT++++EI   ++  W  +       
Sbjct: 101 LPWAGMLAGGVASALVALLLGYPCFRLAGHYFSIATIVIAEIGLLLVHNWDFVGGAMGIQ 160

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
           +  +   +             +   F   ++   +  LG+      +   +  +     W
Sbjct: 161 WPFNPDSW-------------WSLQFARDKVPYAHFALGLLAAVWLVTYLIEGSRWGYWW 207

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R ++D+ +A  SL   +  +K++A AVS+ F  + G F+AA    I P+        ++ 
Sbjct: 208 RAVKDDAEAARSLGVEVFRSKMAAAAVSAFFTAVGGGFYAAYVSYIDPESVMSFRFSLLF 267

Query: 271 SI-VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           ++  +LGG+ +L       AILI + E+                 S N     L    + 
Sbjct: 268 ALPAVLGGIGTLWGPLVGAAILIPLTEISRSY----------LGGSGNGLDLMLYGALVM 317

Query: 330 LVILMRSHSLLRLRTPSN 347
           +V L R   +L L   S 
Sbjct: 318 VVALARPEGVLSLFARSR 335


>gi|262066269|ref|ZP_06025881.1| ABC transporter, permease protein LivM, hydrophobic amino acid
           uptake family [Fusobacterium periodonticum ATCC 33693]
 gi|291380039|gb|EFE87557.1| ABC transporter, permease protein LivM, hydrophobic amino acid
           uptake family [Fusobacterium periodonticum ATCC 33693]
          Length = 326

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 74/335 (22%), Positives = 138/335 (41%), Gaps = 45/335 (13%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            + ++   +LF  + +    +Y   + I ILI V+ A  L+I VG LG ++L      +I
Sbjct: 14  AVLLILYFILFSLINSGFISRYQIGIIILILINVILAASLNITVGCLGQITLGHAGFMSI 73

Query: 77  GAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           GAY+  +L             + +    +++G  G I+G+P+L+  GDYLAI TL   EI
Sbjct: 74  GAYTAALLTKSGILSGYPGYIVALIAGGIVAGIIGFIIGIPALRLTGDYLAIITLAFGEI 133

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            + +LI++   T G  G+    R                         I  + ++  +  
Sbjct: 134 IR-VLIEYFKFTGGAQGLTGIPR-------------------------INNFTLIYFITI 167

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            S   +  +  +    A   IR+++ A  +      + K  AF +S+ F G+AG  +A +
Sbjct: 168 FSVIFMYSIMTSRHGRAVLAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGGIYAHN 227

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              +    F ++ +I ++ +V+LGGM S +    +  +L  + E+      Y        
Sbjct: 228 LGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAIVLTILPEVLRSFAEY-------- 279

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                     +  + L +++L R   LL       
Sbjct: 280 -------RMIVYPLILIIMMLFRPKGLLGREEFQI 307


>gi|170016905|ref|YP_001727824.1| ABC-type branched-chain amino acid transport system, permease
           component [Leuconostoc citreum KM20]
 gi|169803762|gb|ACA82380.1| ABC-type branched-chain amino acid transport system, permease
           component [Leuconostoc citreum KM20]
          Length = 326

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 85/340 (25%), Positives = 138/340 (40%), Gaps = 43/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           KY     LL  +  +L+ L        +Y  +  + I I ++ A GL++V+G  G  SL 
Sbjct: 7   KYTLTWALLITMLFVLIELLTVFDIIGQYGITTIVLIGINLIAAVGLNLVIGMSGQFSLG 66

Query: 70  CVIAYAIGAYSYVILGSRYG--LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  ++ +         L + V  +ISG   + +G+P+L+ RGDYLAIATL
Sbjct: 67  HAGFMAIGAYATALMTTALPSIYGFILSLLVGGLISGLVALAVGIPTLRLRGDYLAIATL 126

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + I+I    IT G AGI+                                   +
Sbjct: 127 GVSEIIRIIIINM-KITRGPAGIFGIPAFVNWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  +   I++   R+    A   +RDN  A  SL       K+ AF   +    +AG 
Sbjct: 161 FVLSVIVIIIVVNFVRSTSGQAIIAVRDNDIAAESLGINTTKYKVMAFVAGAILAAIAGG 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A+    +SP  + F ++I ++ IV+LGG+ S+S       IL  +  +          
Sbjct: 221 LRASFIQSVSPQDYTFMQSITILIIVVLGGIGSISGTVVTAIILGVLDVVLQNF------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  + L +V++ R   LL     S 
Sbjct: 275 ---------GTLRMVIYALVLIIVMIFRPKGLLGTTEFSL 305


>gi|317487018|ref|ZP_07945826.1| branched-chain amino acid transport system/permease component
           [Bilophila wadsworthia 3_1_6]
 gi|316921700|gb|EFV42978.1| branched-chain amino acid transport system/permease component
           [Bilophila wadsworthia 3_1_6]
          Length = 347

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 61/333 (18%), Positives = 113/333 (33%), Gaps = 7/333 (2%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  LA +  L LFL    T    Y   +   I +  + A  L+++ G  G+ SL     
Sbjct: 8   LLLNLAAIGLLALFLVWAETNLDGYKVQILNLIAVNAILALSLNLIYGFTGMFSLGHAGF 67

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            AIGAY   +          + I    +      +I               A   +    
Sbjct: 68  MAIGAYVSALCVLPAAQKEMMWILEDII--WPFSVIHTPFWFSVVAGGFVAAIFGLFIAI 125

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             + +    +     G     R+  +  T  +          F    +  Y  LL   + 
Sbjct: 126 PVLRLGGDYLGIATLGFAEIIRVLIVNLTPITNGSLGIKGIPFHASLLVNYGWLLVTLYC 185

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              ++     +   N ++ IRD++ A   +       K+ +F + + F G+ GA      
Sbjct: 186 MVKLL----GSNFGNIFKAIRDDEIAAKVMGIDTFRTKVLSFCLGAFFAGVGGALLGNLL 241

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             I P MF F     V+ IV+ GG+ SL+     +A++  ++E    +            
Sbjct: 242 TTIDPKMFTFLLTFNVLMIVVAGGLGSLTGSILGSAVITVLLEWLRAVEDPITLGGFAIP 301

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                    +  + L  +IL R   ++ +R  +
Sbjct: 302 -GIPGMRMVVFSLVLLCIILYRREGIMGMREIT 333


>gi|94986781|ref|YP_594714.1| branched chain amino acid ABC transporter, permease protein
           [Lawsonia intracellularis PHE/MN1-00]
 gi|94731030|emb|CAJ54393.1| branched chain amino acid ABC transporter, permease protein
           [Lawsonia intracellularis PHE/MN1-00]
          Length = 328

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 77/321 (23%), Positives = 139/321 (43%), Gaps = 31/321 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L + + +       Y   +   + +YV+ A  L++++G  G+  +     YA+GAY  
Sbjct: 10  LLLGVCIAILPLFLNNYWIDVASNVGLYVLLALSLNVILGQTGIFHMGHSAFYAVGAYFT 69

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK-W 140
            I  + Y + I  L+P++   +    +I+  P L  RGDYL I ++ + EI +  L    
Sbjct: 70  AICNTYYQIPILWLLPLAGFTTAFFALIIVRPILSLRGDYLLIVSIGIVEIVRIALTNDI 129

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             IT G  GI+   R       +R+  +F              YY++ G+  L+  +  W
Sbjct: 130 CGITGGANGIFGISRPTIGDIVIRTTTQF--------------YYLIWGIVLLTMLLFSW 175

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  +    A+ +I++++ A       II  K  AF V + + G+AG  FA+    ISP  
Sbjct: 176 LFSSRYGRAFNSIKEDEVAAEGSGINIIHYKWLAFVVGAFWAGIAGNLFASKMTVISPTS 235

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F   E++I+  IVIL G  S   +   T  +I + E+   +                   
Sbjct: 236 FTIWESVIIFVIVILSG-GSQLGVILGTCFVIALPEIFRSLAD---------------AR 279

Query: 321 TTLMVIALFLVILMRSHSLLR 341
             +  +A+ +++++R   LL 
Sbjct: 280 MLIFGLAMMIMMIVRPQGLLP 300


>gi|187921210|ref|YP_001890242.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
 gi|187719648|gb|ACD20871.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
          Length = 351

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 68/338 (20%), Positives = 132/338 (39%), Gaps = 33/338 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L++Y  +L  L VV  L L L  G         S+  ++L++ + A G ++++G  GLLS
Sbjct: 25  LHRYRFLLLTLLVVCILPLTLRSG---------SLATEVLVFALAALGCNLLLGHTGLLS 75

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
               I + +G+Y   ++ ++ GL + + +  SA+I  A   ++G  S++ RG Y  + TL
Sbjct: 76  FGQGIFFGLGSYCAGLVLTKTGLPVSMALLASAVIGAAAAALVGWFSIRQRGTYFVMLTL 135

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              ++F  +      +T G  G+    R           +  F      +      Y  +
Sbjct: 136 AFGQLFYFLAYTTPDLTGGDNGLLDIPRPA---------LGLFGKALVPLTSPWQYYGFV 186

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  +   +++ +  +        IRDN+    ++   +   KL AF +S A  G+AGA
Sbjct: 187 AVLFLVVFWLLMRVSHSVFGRTLLAIRDNEARAAAVGYDVKRFKLMAFVISGAVTGLAGA 246

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A            +  + +++ + ++GG  +L       A  +   +    +   +  
Sbjct: 247 LHALMTGIAPLSNIDYHTSEMILVMTVIGGTGNLFASVLGAAFYVLFADWLSTLWPRW-- 304

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                          L+ I L  V L     L  L   
Sbjct: 305 -------------LLLLGIVLIAVSLYMQRGLWGLGER 329


>gi|190894958|ref|YP_001985251.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700619|gb|ACE94701.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 328

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 66/310 (21%), Positives = 123/310 (39%), Gaps = 25/310 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
              +  Y+    I  LI+++ A GL+++VG  GLLSL     + IGAY+  +L   YG  
Sbjct: 31  PFVASTYVVHALIIALIFMLPAHGLNLLVGYTGLLSLAQAAFFGIGAYASGLLAVTYGTP 90

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            ++ +  + + +GA  + +G+P+L+ R     + TL    I Q I   W  +T G  G+ 
Sbjct: 91  FYVNVAAAGLAAGAIALPLGIPALRLRSTSFVMCTLGFVIIGQAIAKNWISLTRGDMGLS 150

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              +                  S  V      YY+ L +  L+   +  + R+       
Sbjct: 151 SIPKP----------HFALGPLSFTVSGTTAFYYLALTVGILATLAVWMIVRSPAGRNMI 200

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            IR+N+    S+       KL  F +S+ F G+ G+ +A     +SP  F+   +  ++ 
Sbjct: 201 AIRENETLAESVGIPTWRYKLIVFMLSAVFAGVGGSLYAHYLTVVSPLTFQMYYSTTMLI 260

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           IV+ GG  ++S +   + + +G+ E                             + L ++
Sbjct: 261 IVLGGGAGTISGVVFGSLLFVGLTEALR---------------VTPELRMIAYGLCLLVL 305

Query: 332 ILMRSHSLLR 341
           +         
Sbjct: 306 VFWFRKGFAP 315


>gi|326402989|ref|YP_004283070.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|325049850|dbj|BAJ80188.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 328

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 65/325 (20%), Positives = 126/325 (38%), Gaps = 26/325 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           + A +  L L        +      +  ++LIY M A GL++++G  G LS      + +
Sbjct: 22  ISAAIIWLALLFVPIWLPAVGGFTDLASRVLIYAMAATGLNLLLGYTGGLSFGHAAYFGL 81

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY   +       S+ L +    ++ G  G+++G   +K +G Y ++ T+   ++F  +
Sbjct: 82  GAYGTGLFIIHVIPSMPLALIAGTLLGGIGGILVGPMVMKRKGIYFSMITIAFGQMFYFL 141

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            ++W  +T G+ G            T  S +       +  +     YYV+L +  +   
Sbjct: 142 AVRWNTVTGGEDG-----------LTGFSRVPLHLGGETINLGPARFYYVVLALFAVVML 190

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++  + R+ + +A+   R+N      L   +      AFA+S+    +AG+  A      
Sbjct: 191 VVWQILRSPMGHAFVATRENTTRLRFLGVAVDKQVWVAFAISAFITALAGSLNAMLTAFA 250

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SPD  ++  +   + I +LGGM S         I I   +    +               
Sbjct: 251 SPDDLQWQLSGSFVVICVLGGMRSFWGPFLGAVIYIVAQDYLSSV--------------- 295

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                T + +   L +L     LL 
Sbjct: 296 TQNWMTYIGLIFVLSVLFFPQGLLG 320


>gi|188995188|ref|YP_001929440.1| probable ABC transporter membrane protein [Porphyromonas gingivalis
           ATCC 33277]
 gi|188594868|dbj|BAG33843.1| probable ABC transporter membrane protein [Porphyromonas gingivalis
           ATCC 33277]
          Length = 300

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 21/294 (7%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y+  + + I IY + A  LS+V G  G +SL     Y +GAY+  ++   +G    L IP
Sbjct: 3   YLLHLFVLICIYTILAQSLSLVAGYSGQVSLAHAGFYGLGAYTTALMSIHWGTPAMLNIP 62

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           V+ ++SG    I+   + K   DY  I TL +  +  +I+  W+ +T+G  GI       
Sbjct: 63  VAMLLSGGLAWIVARVAAKTVDDYYIIITLGIQVVIYSIMNNWQSVTHGPLGIPGIPA-- 120

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                      F       +  +     + + +  L    +  L  +        + +++
Sbjct: 121 -----------FAIVSGVELESKFAYCLLGVTLASLVWGALHRLMHSPFGRVLIALSEDE 169

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               SL   +  AK  +F +S     +AG  +A     I P  F   E+I ++SIVI+GG
Sbjct: 170 VYTKSLGKDVAGAKTVSFVISGMLASIAGVLYAHYISYIDPSSFTVDESIFILSIVIIGG 229

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           M +L  I  A A L+ + E    +                        +AL LV
Sbjct: 230 MRNLWHIFYAAAFLVLLPEALRFVGMP--------SSVAANMRQIFYGLALILV 275


>gi|297530143|ref|YP_003671418.1| inner-membrane translocator [Geobacillus sp. C56-T3]
 gi|297253395|gb|ADI26841.1| inner-membrane translocator [Geobacillus sp. C56-T3]
          Length = 346

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 66/324 (20%), Positives = 129/324 (39%), Gaps = 28/324 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +     L L      +  Y   M     I+++  +GL++  G  G LSL     +AIG
Sbjct: 9   LWIAVLAALALAFPLLVTNSYYLHMMTISFIWMIAVYGLNLFAGYTGYLSLAHAGFFAIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL  + G+  WL   ++ + +   G ++GL +L+ +  + AI TL +  I   I+
Sbjct: 69  AYALGILTVKAGVPFWLAFVLACLFTTLLGAVIGLVALRTKEHFFAIYTLCVGYIIYLII 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW  +T G  G                               +  YY++L         
Sbjct: 129 DKWDSLTGGVRGFIGIPAPAD-------------IGPLSFQTPVAQYYLVLCFLVAVIFT 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  +     +  IR++++   +L  + +  KL++F +S  F  +AGA +A+    + 
Sbjct: 176 MYRLVYSLTGRTYIAIRNSEELALTLGISTMKNKLASFVLSVFFTSLAGALYASFIRFLG 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           PD+   S     ++ +++GG+ +L+     T ++  + +    +  Y             
Sbjct: 236 PDIAYVSVMFDFLTYLLVGGIGTLAGPVVGTLLITFLSQQLQFLQDY------------- 282

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                +    L L+I+   H +  
Sbjct: 283 --RMLIFGPVLTLLIIFYPHGIAG 304


>gi|294783606|ref|ZP_06748930.1| branched-chain amino acid transport system permease protein LivM
           [Fusobacterium sp. 1_1_41FAA]
 gi|294480484|gb|EFG28261.1| branched-chain amino acid transport system permease protein LivM
           [Fusobacterium sp. 1_1_41FAA]
          Length = 326

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 73/335 (21%), Positives = 139/335 (41%), Gaps = 45/335 (13%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            + ++   +LF  + +    +Y   + I ILI V+ A  L+I VG LG ++L      +I
Sbjct: 14  AVLLILYFILFSLINSGFISRYQIGIIILILINVILAASLNITVGCLGQITLGHAGFMSI 73

Query: 77  GAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           GAY+  +L             + + V  +++G  G I+G+P+L+  GDYLAI TL   EI
Sbjct: 74  GAYTAALLTKSGFLSGYPGYIVALIVGGIVAGIIGFIIGIPALRLTGDYLAIITLAFGEI 133

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            + +LI++   T G  G+                             ++  + ++  +  
Sbjct: 134 IR-VLIEYFKFTGGAQGLTGIP-------------------------KVNNFTLIYFITI 167

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            S   +  +  +    A   IR+++ A  +      + K  AF +S+ F G+AG  +A +
Sbjct: 168 FSVIFMYSIMTSRHGRAVLAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGGIYAHN 227

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              +    F ++ +I ++ +V+LGGM S +    +  +L  + E+      Y        
Sbjct: 228 LGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAIVLTILPEVLRSFAEY-------- 279

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                     +  + L +++L R   LL       
Sbjct: 280 -------RMIVYPLILIIMMLFRPKGLLGREEFQI 307


>gi|326402537|ref|YP_004282618.1| branched-chain amino acid ABC transporter permease [Acidiphilium
           multivorum AIU301]
 gi|325049398|dbj|BAJ79736.1| branched-chain amino acid ABC transporter permease protein
           [Acidiphilium multivorum AIU301]
          Length = 308

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 70/323 (21%), Positives = 132/323 (40%), Gaps = 30/323 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             + +              S+     IY + A    I++G  G+  +   + + IGAY  
Sbjct: 11  IAVWILGLFLPLALNSAWVSVAAIFAIYGIVALSEDIILGRAGMFDMGHAVYFGIGAYVT 70

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-IKW 140
            IL   +   I+L IP + +++ A G ++  P ++ RGDYL +A++  + IF   +    
Sbjct: 71  AILNVTFDWPIFLTIPFAILLAAAFGALLAAPLIRLRGDYLLVASIGFNAIFVLAMQNNL 130

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G  GI         G  + S                 MY++   +  +   ++  
Sbjct: 131 FGLTGGSDGITGIGVPSLFGLPIESQS--------------AMYWLDWVVLGIVLVLMRN 176

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  +    A R ++ ++ A  ++       K  AFA+ +   G+AG  FA     +SP  
Sbjct: 177 LDGSEFGRALRYLKQDELAATTIGVNPRKVKTLAFAIGAGLAGLAGTLFAVQLSTVSPSS 236

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           FKF+E++ + +IVI+GG  S+  +   TA++  + ++      Y                
Sbjct: 237 FKFTESVTLFAIVIVGGQGSIPGVLLGTALMFVLPQVFRDFAQY---------------R 281

Query: 321 TTLMVIALFLVILMRSHSLLRLR 343
             +   A+ LV+++R   L   R
Sbjct: 282 YLVFGFAMILVMVLRPQGLWPRR 304


>gi|56698116|ref|YP_168488.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56679853|gb|AAV96519.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 358

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 78/344 (22%), Positives = 142/344 (41%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ ++Y   + L       + F  +    +  + +++ I  LIY + A GL+I+VG  
Sbjct: 20  FPIKFDRYRYYVVLA------VAFGIIPFIINDYWANALLIPFLIYAIAAIGLNILVGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +   +S+++ + ++  I+ A G++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKLMTAFPEVSMFIHVILAGGITAAVGVLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N                       F    +        
Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGQINAPERDTFGIIITGPNAPAWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L      A I   L R  +   W  IRD   A   +    + AK++AFAVSS FI
Sbjct: 185 TYLFCLVFLTACALIARNLTRGTMGRTWMAIRDMDIAAEIIGVNPLKAKMTAFAVSSFFI 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F A         + F   ++ +V+ +VI+GG+ S+       A L+ +  +   
Sbjct: 245 GISGALFFALYLGAVEVGEAFGIQKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVVLKV 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +                     ++   + + ++M  H L +L  
Sbjct: 305 VGADMLGWPTDI---VAHLQLVIVGGLIVVFLIMEPHGLAQLWR 345


>gi|323700225|ref|ZP_08112137.1| inner-membrane translocator [Desulfovibrio sp. ND132]
 gi|323460157|gb|EGB16022.1| inner-membrane translocator [Desulfovibrio desulfuricans ND132]
          Length = 364

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 54/339 (15%), Positives = 124/339 (36%), Gaps = 28/339 (8%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY----- 88
               YI ++ +   I +M +  L++V G++G  +        +GAY   +L         
Sbjct: 25  ILDNYIQAVIMFGGINIMMSTSLNLVNGNMGEFTCGHAAFMCVGAYVASLLSVLCFGNKF 84

Query: 89  ----------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
                          ++I +   ++    +++ LPS K R DYLAI T+ ++ +  + + 
Sbjct: 85  GDPLLPAAASYFVFPVIILMGGAVAALSSILVALPSFKTRDDYLAIITIAVNYMVISAIE 144

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               I   +    + D ++ +  +  S         +      ++   ++        +I
Sbjct: 145 NMDWIGGSRGFQGMKDTVWAMVDSTPSW-------LAGDNDFPWVLLFVILFTAFDIWVI 197

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
                +        +  ++ A   ++      K   F +S+   G AG  FA     ++P
Sbjct: 198 RRFITSTYGKGVNAVCQDETAAEIMSVNTNKIKTVNFMISAGLAGCAGGLFAHVVGYVNP 257

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG------MNFYYFNSLLKF 312
             F   ++   + +V LGGM SLS    +  +   ++E+         +          +
Sbjct: 258 QSFNILKSTEAMVMVYLGGMGSLSGAVISAVVFTFLLEVLRSQALIDFLLAPATFVFPDW 317

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           + S  +    L+ + L L++  R   ++  +  S+   +
Sbjct: 318 EPSAGVIKWVLIPLLLVLIMQFRPEGIMGNKELSDVFPK 356


>gi|89902149|ref|YP_524620.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89346886|gb|ABD71089.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 526

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 95/306 (31%), Gaps = 17/306 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                I ++ A GL+I  G +G++++       IGAY+  ++ + +   +        + 
Sbjct: 237 ISLGSILLLVALGLAITYGLMGVINMAHGELMMIGAYATYVVQALFQKYLPGAFDWYLLA 296

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           S     +             ++   +     + +L  W      +  +        +G  
Sbjct: 297 SVPVAFLASALMGAALER--SVIRFLYGRPLETLLATWGISLMLQQLVRSFFGAQNVGVE 354

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             S +         +        ++    F+  ++   + RT +    R +  N+     
Sbjct: 355 NPSWMSGGVQVLGNLSLPFNRLVIVGFAVFVLLAVAWLIGRTRLGLFVRGVTQNRPIAAC 414

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +          AFA+ S   G+AG   A S+             +    +V+LGG+  L+
Sbjct: 415 MGVNTARIDTYAFALGSGIAGLAGC--ALSQVGNVGPDLGQGYIVDSFMVVVLGGVGQLA 472

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L  + +   G                       +++ + + I  R   +  +
Sbjct: 473 GTVYAAMGLGILNKFLEGWTGAVLAK-------------IAVLVFIIIFIQKRPQGIFAM 519

Query: 343 RTPSNF 348
           +  S  
Sbjct: 520 KGRSAE 525


>gi|160901753|ref|YP_001567334.1| inner-membrane translocator [Petrotoga mobilis SJ95]
 gi|160359397|gb|ABX31011.1| inner-membrane translocator [Petrotoga mobilis SJ95]
          Length = 357

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 59/339 (17%), Positives = 121/339 (35%), Gaps = 7/339 (2%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+   K    +  +  + L L     K+  Y+  +   + I ++FA  L+ + G  G+ S
Sbjct: 5   LSFKTKFFLTILFILAIFLLLLTANNKASDYLILILNLMAINIIFAVSLTFINGITGIFS 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L  V   AIGAY   IL           +    +       I  LP++   G  L  A  
Sbjct: 65  LGHVGFIAIGAYVSSILTLSPAQKEISFLIKPLIYPLNVIQIPFLPAIIIAG--LVAAAF 122

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                  ++ +    +     G+    R+    T   +            I +    +  
Sbjct: 123 GYLVAAPSLRLIGDYLAIATLGLGEVVRIVANNTWSITN----GALGLKSIPQYSNLWWT 178

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
            G   ++   I  L +++   A + IR++  A  S+   +   ++  F + S F G+ GA
Sbjct: 179 WGFALITVVFISSLIKSSYGRALKAIREDPIAAKSMGINVFSHQVVTFVIGSFFAGVGGA 238

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A     I P  F F +   ++ +V++GG+ S+S      ++    +E    +      
Sbjct: 239 LWAHLITTIDPKSFMFQKTFEILIMVVIGGLGSISGAIIGASLYTVGLEFLRVLEEPISI 298

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
             +            ++ + L + +L     ++     +
Sbjct: 299 GPIYIP-GIPGMRMVVLSLILIITMLFWRRGIMGRNEIT 336


>gi|111018006|ref|YP_700978.1| ABC branched chain amino acid transporter, permease component
           [Rhodococcus jostii RHA1]
 gi|110817536|gb|ABG92820.1| ABC branched chain amino acid transporter, permease component
           [Rhodococcus jostii RHA1]
          Length = 329

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 60/310 (19%), Positives = 122/310 (39%), Gaps = 6/310 (1%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           +G   + Y + A GL++  G  GLL+   +    +G Y   I+   Y   +W+ I V   
Sbjct: 15  IGPSAIFYALLAIGLNLHFGYAGLLNFGQIGFALLGGYGVGIMTVTYQQPLWVGILVGLA 74

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIYVADRLYFL 159
            +G   +++G+P+L+ R DYLAI T+  SEI + I        IT    G++     +  
Sbjct: 75  AAGLLAVVLGIPTLRLRADYLAIVTIAASEILRLIFRSTASDSITGSTNGLFGFADPFTT 134

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            +   S  ++      F   +++   V   +  +    +  L  +      + +R+++ A
Sbjct: 135 LSPFDSGKQYNFLGVKFYGDDLWSMVVGWTLVLVLCGFVFLLTHSPWGRVLKAVREDEDA 194

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   +   K+ A  +     G+ G F A     I+PD +  ++       +ILGG  
Sbjct: 195 ARALGKNVFVYKMQALVLGGMIGGLGGVFNALQTKSINPDFYSTAQTFFAFGALILGGAA 254

Query: 280 SLSKIAKATAILIGVV----ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           ++        +   ++     L           L   +         L+ I + ++++ R
Sbjct: 255 TVFGPVVGAMLFWFLLAIPDALLRQAISGPEPLLPLTEQQVGAMRFVLLGIMIAVLMVFR 314

Query: 336 SHSLLRLRTP 345
              +L  +  
Sbjct: 315 PQGILGNKRE 324


>gi|322411204|gb|EFY02112.1| branched-chain amino acid transport system permease protein
           [Streptococcus dysgalactiae subsp. dysgalactiae ATCC
           27957]
          Length = 317

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 78/343 (22%), Positives = 140/343 (40%), Gaps = 42/343 (12%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           + NK      L+  +  L+L L +G      Y   + + I I ++ A G ++V+G  G  
Sbjct: 3   KENKALLAWILILALVYLILTLLIGTVTLGPYYVQILMGIGIAIIMAMGTNLVLGFSGQF 62

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            L      A+GAY+  IL          +L + V  +++G   +I+G P+L+ +GDYLAI
Sbjct: 63  PLGQAGFMAVGAYATAILTKYMPTYLGFYLSMLVGVLVAGLIAVIVGFPTLRLKGDYLAI 122

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           ATL ++EI +  +I    +TNG AG                            + +   +
Sbjct: 123 ATLGVAEIIRIAIINGGELTNGAAG-------------------------LTGVLQYTSW 157

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            V+     + A ++L   R+A       +R+++ A  S+       K+  FA+++    M
Sbjct: 158 PVVYAFVVVIAIVMLNFIRSATGRKVIAVREDEIAAESMGVNTTKIKVITFALAAMTASM 217

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG+ +      + P  F    +I  + I +LGG+ S++    A  +L  +          
Sbjct: 218 AGSLYVGYIGTVVPKDFTIMRSIDYLIIAVLGGLGSMTGTIVAAIVLGLLNMYLQNF--- 274

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                       +     +  +AL LV++ R   LL  R    
Sbjct: 275 ------------SDVRMIIYSLALILVMVFRPGGLLGTREFRL 305


>gi|254510519|ref|ZP_05122586.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacteraceae bacterium KLH11]
 gi|221534230|gb|EEE37218.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacteraceae bacterium KLH11]
          Length = 358

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 75/344 (21%), Positives = 144/344 (41%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ ++Y   + L       + F  +    +  + +++ +  LIY + A GL+I+VG  
Sbjct: 20  FPIKFDRYRYYVVLA------VAFGIIPFIINDYWANALLLPFLIYAIAAIGLNILVGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +   +S+++ + ++  I+   G++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKLMTAFPDISMFIHVILAGGITAIVGVLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N                       F    +        
Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGQINAPERDVFGIVITGPNAPAWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L    + A +   L R +    W  IRD   A   +    + AKL+AFAVSS F+
Sbjct: 185 TYLFCLIFVTVCAIVARNLTRGSTGRKWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFV 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G+AGA F A         ++F   ++ +V+ +VI+GG+ S+       A L+ +  +   
Sbjct: 245 GVAGALFFAVYLGAVEVGEVFGIQKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVVLKL 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +                  +  ++   + + +++  H L +L  
Sbjct: 305 IGVDLLGWPTDI---VAHLNLVVVGALIIMFLILEPHGLAQLWR 345


>gi|149916234|ref|ZP_01904755.1| inner-membrane translocator [Roseobacter sp. AzwK-3b]
 gi|149809894|gb|EDM69745.1| inner-membrane translocator [Roseobacter sp. AzwK-3b]
          Length = 329

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/328 (15%), Positives = 114/328 (34%), Gaps = 22/328 (6%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            +I+  L V+      L             + + + I ++      ++    G  SL  V
Sbjct: 1   MRIVRRLVVILLAACALLALPHGLSFSQQEILVFLTINILLVSSYRLLT-LTGEWSLAHV 59

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           +   +GAY+  +     G+ + + I +    +    +++  P  + +G Y  I +    E
Sbjct: 60  VIMGVGAYASALYSKELGVWVPVSILLGGATAALLAVLLSFPLFRMKGFYFLIGSFAAGE 119

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I + +  +++    G  GI   + +      +     F           +  YY+   + 
Sbjct: 120 IIRLLWKRFRDPFGGPKGIKGIEPMPDFSIGIYDFDFFE---------PVSYYYLSAFVV 170

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +   ++  + R+ +   +  +    K   +    +   +  AFA++S F G+ G   A 
Sbjct: 171 AVCLWLLWRIERSPVGLTFHAVHWQDKLAEASGVNLRAYRTLAFAIASGFAGIGGGLMAH 230

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               I+P+ F     + V++  I+GG  +         +L  + E+              
Sbjct: 231 YVGTINPNSFDVDLMVYVLTWAIVGGTGTFYGPILGCVVLTVLNEIVLR----------- 279

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSL 339
            +  F      +  + + L IL     L
Sbjct: 280 -ELGFEQMRPLIYGLIMILSILFLPKGL 306


>gi|154486423|ref|ZP_02027830.1| hypothetical protein BIFADO_00237 [Bifidobacterium adolescentis
           L2-32]
 gi|154084286|gb|EDN83331.1| hypothetical protein BIFADO_00237 [Bifidobacterium adolescentis
           L2-32]
          Length = 454

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 96/305 (31%), Gaps = 28/305 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I  L+  + + G+++V G+ GL S +      +G     +      + +      + +I
Sbjct: 174 IIFGLMLGLMSVGMNLVYGTTGLQSFSHGEQVTLGGLMAYVGTQMLHMPLIASAIFAIVI 233

Query: 103 SGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
               G I          R     +  +I++      L        G     +        
Sbjct: 234 GALTGFIQNEIVWGPLRRRHVGTMQQMIVTIGLSMALQYTFQFFFGGDIKGIV------- 286

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                      F    +  ++      L    +   + L+L +T +  A R + DN    
Sbjct: 287 -----KSVPDSFQLGPITTDMPTLVSALIAICVIVGVTLFLYKTRLGRATRAVSDNAALA 341

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +    +       + +S A   ++G       + IS +    +  +++ + V LGG+ +
Sbjct: 342 AASGINVDQVVRVVWILSCAMAALSGVLLGVYLNGISWNT-GATLILLMFAAVTLGGLGT 400

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
            +     + ++  V ++   +               N       +  L +V+L+R   + 
Sbjct: 401 ANGALIGSLVIGIVADMSSLVIP-------------NDMRYASALAILIIVLLVRPQGIF 447

Query: 341 RLRTP 345
             +  
Sbjct: 448 GKQQR 452


>gi|148259375|ref|YP_001233502.1| inner-membrane translocator [Acidiphilium cryptum JF-5]
 gi|146401056|gb|ABQ29583.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Acidiphilium cryptum JF-5]
          Length = 308

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 70/323 (21%), Positives = 132/323 (40%), Gaps = 30/323 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             + +              S+     IY + A    I++G  G+  +   + + IGAY  
Sbjct: 11  IAVWILGLFLPVVLNSAWVSVAAIFAIYGIVALSEDIILGRAGMFDMGHAVYFGIGAYVT 70

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-IKW 140
            IL   +   I+L IP + +++ A G ++  P ++ RGDYL +A++  + IF   +    
Sbjct: 71  AILNVTFDWPIFLTIPFAILLAAAFGALLAAPLIRLRGDYLLVASIGFNAIFVLAMQNNL 130

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G  GI         G  + S                 MY++   +  +   ++  
Sbjct: 131 FGLTGGSDGITGIGVPSLFGLPIESQS--------------AMYWLDWVVLGIVLVLMRN 176

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  +    A R ++ ++ A  ++       K  AFA+ +   G+AG  FA     +SP  
Sbjct: 177 LDGSEFGRALRYLKQDELAATTIGVNPRKVKTLAFAIGAGLAGLAGTLFAVQLSTVSPSS 236

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           FKF+E++ + +IVI+GG  S+  +   TA++  + ++      Y                
Sbjct: 237 FKFTESVTLFAIVIVGGQGSIPGVLLGTALMFVLPQVFRDFAQY---------------R 281

Query: 321 TTLMVIALFLVILMRSHSLLRLR 343
             +   A+ LV+++R   L   R
Sbjct: 282 YLVFGFAMILVMVLRPQGLWPRR 304


>gi|260427755|ref|ZP_05781734.1| ABC branched-chain amino acid family transporter, fused ATPase and
           inner membrane subunit [Citreicella sp. SE45]
 gi|260422247|gb|EEX15498.1| ABC branched-chain amino acid family transporter, fused ATPase and
           inner membrane subunit [Citreicella sp. SE45]
          Length = 609

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 58/322 (18%), Positives = 119/322 (36%), Gaps = 45/322 (13%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS--------- 91
            +     I ++   G+ I  G+ G+LS   +   A+GAY   +L     +          
Sbjct: 36  RVLSVFFISLIAVVGIGIYSGNSGVLSFGHLSFMAVGAYVSALLTLPAAMKAATLPKLPA 95

Query: 92  --------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
                   ++  I V+ +++ A  +++GL   +  G    IATL +  I   ++I W+ +
Sbjct: 96  WLAATELGLFPAILVAIVVTCAFALVVGLAVGRLDGSAATIATLGLLIITHGVIIGWRDV 155

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
           T G    +   R                             +V  G C  +  +    R 
Sbjct: 156 TRGSGTFFGVPRET-------------------------SLWVAAGWCVAALVVARLYRD 190

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           +      R  R+N  A  ++   +   +L ++ +S+A + ++GA  A      SP  F F
Sbjct: 191 SVSGLRLRASRENAIAAGAVGVDMKRERLISWILSAAVMAVSGALIAHFLGAFSPKKFYF 250

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            +   +++++I+GGMT+++        +  V E+       +          F      +
Sbjct: 251 VDTFQLLAMLIVGGMTTVTGAVTGAVTITVVTEVLRRFESGFDIGAFTVPQVFGTTQ--I 308

Query: 324 MVIALFLVILMR-SHSLLRLRT 344
            +  + L  + R +  L  L+ 
Sbjct: 309 GIALIILFAMFRKAEGLAGLKE 330


>gi|296135328|ref|YP_003642570.1| inner-membrane translocator [Thiomonas intermedia K12]
 gi|295795450|gb|ADG30240.1| inner-membrane translocator [Thiomonas intermedia K12]
          Length = 354

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 77/339 (22%), Positives = 140/339 (41%), Gaps = 23/339 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +R ++      L      L+ F+ +    S   + ++ +  LI  + A GL+++VG
Sbjct: 18  QIFPIRQDR------LFIGAVLLIAFVAVPLLGSDYLLRALLVPFLILALAAIGLNVLVG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
             G +SL      A+GAY+   ++    G+ + + + ++ +I+   GM+ GLPSL+ RG 
Sbjct: 72  YCGQISLGTGAFMAVGAYAAFNLMVRLPGMPLLIALVLAGLIAALAGMVFGLPSLRIRGL 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL        +      +TNG +   V                        +   
Sbjct: 132 YLAVATLAAQFFSDWVFAHVPWLTNGSSSGSVTAPQLQ-------------VFGFVIDSP 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           I  Y   L +  + A ++  L R      W   RD   A   +  + + AKLSAFAVSS 
Sbjct: 179 IRKYLFCLAILSVLALLVKNLVRGRKGREWMATRDMDVAASVIGISPVRAKLSAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            +G+AGA +A        P  F    ++ ++ ++I+GG+ S+       A ++ +     
Sbjct: 239 IVGIAGALWAFVHLGSWEPAAFNIDLSLKLLFMIIIGGLGSVMGSLFGAAFIVLLPIFLN 298

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +  +    L       +        + + L ++   H 
Sbjct: 299 RLLSFL--GLQASTSFISHLELMTFGVLIVLFLIAEPHG 335


>gi|25011670|ref|NP_736065.1| hypothetical protein gbs1630 [Streptococcus agalactiae NEM316]
 gi|77408315|ref|ZP_00785057.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae COH1]
 gi|77414835|ref|ZP_00790951.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae 515]
 gi|24413210|emb|CAD47289.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77159112|gb|EAO70307.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae 515]
 gi|77173078|gb|EAO76205.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae COH1]
 gi|319745544|gb|EFV97846.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus agalactiae
           ATCC 13813]
          Length = 317

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 78/335 (23%), Positives = 140/335 (41%), Gaps = 42/335 (12%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              + V+  LL+ + +       Y   +   I I V+ A GL+++VG  G  SL      
Sbjct: 11  WLAIVVLGYLLISVLISMGIFNLYHIQIIETIGINVILAVGLNLIVGCSGQFSLGHAGFM 70

Query: 75  AIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           AIGAY+  I+G +        + I V  +++G   + +G+P+L+ +GDYLAIATL ++EI
Sbjct: 71  AIGAYAVAIIGVKMPTYVGFLIAILVGTLVAGGIALGVGIPTLRLKGDYLAIATLGVAEI 130

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            + +L+    ITNG AGI                                 + ++ G+  
Sbjct: 131 IRILLVNGGDITNGAAGIMGIPPFT-------------------------TWSLVYGVAV 165

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +S  + +   R+ +      IR+++ A  S+       K+  F   +    +AG+  A  
Sbjct: 166 VSLILAMNFLRSPLGRNTIAIREDEIAAESMGVDTTKVKVIVFVFGAILASIAGSLQAGY 225

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              + P  F F  ++ V+ IV+LGG+ S++    A  +L  +  L               
Sbjct: 226 VGTVMPKDFSFMMSVNVLIIVVLGGLGSMTGTVLAAILLGLLNMLLQDY----------- 274

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                     +  +AL L+++ R   LL  +  + 
Sbjct: 275 ----ASVRMIIYALALILIMIFRPSGLLGTKELTL 305


>gi|325970448|ref|YP_004246639.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy]
 gi|324025686|gb|ADY12445.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp.
           Buddy]
          Length = 379

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/357 (14%), Positives = 119/357 (33%), Gaps = 17/357 (4%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +++ + +    +   +    L+           + S+  + +I  + A  ++++ G  GL
Sbjct: 2   IKIKRNNIYTIVTLALLLAFLYWLSANRLQHGMLVSVLQKGVILALVAVSMNLLNGFTGL 61

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGL----------SIWLLIPVSAMISGACGMIMGLPSL 115
            SL      +IGAY+  IL                   +    + + S    + +  P +
Sbjct: 62  FSLGQAGFMSIGAYTTAILLIPVQNLDGVYYMNGVHPAIRAFKTMVASSPELVRIVFPFV 121

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                 L  A          + +K   +     G+    R  F       +       + 
Sbjct: 122 ALLLGGLLAAFAAAFVGIAVLRLKSDYLAIATLGLSEIVRAIFSSPQFDQVTNGSYGLNK 181

Query: 176 FVIYEIFMYYVL------LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
              +   ++  +        +       I+ L +++   A++ IR+++ A  ++   +  
Sbjct: 182 IPNFPPMLWGAIPSLITPFIVVAFCIVFIMLLIKSSYGRAFKAIREDEIAAEAMGINLFK 241

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            K  +F +SS F  +AG   A     I    F  +    ++ IV++GG+ S++    +  
Sbjct: 242 HKEMSFVISSFFSAVAGGLLAMYMRSIEAKTFSITLTYDILLIVVIGGIGSVTGSVISAF 301

Query: 290 ILIGVVE-LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           ++    E      +        +           +  I L +V+L+    L+     
Sbjct: 302 LVTAAKEWWLRFFDQPLTIGTFEVPLFRTGFRMVIFSILLMIVVLIYRKGLMGTNEF 358


>gi|301059360|ref|ZP_07200287.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
 gi|300446589|gb|EFK10427.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
          Length = 349

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 71/344 (20%), Positives = 138/344 (40%), Gaps = 24/344 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++     L+L L       + Y   M   + I ++ A GL+++VG  G +SL     +A
Sbjct: 18  VVVFWFITLMLCLAFFPFFVKNYYVYMANYMAINIIVAVGLNLLVGYTGQISLGHAGFFA 77

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY  V+  ++  L   L +P   +++   G ++G+P+L+  G YL+IATL        
Sbjct: 78  IGAYGTVVFMAKAHLPFLLALPAGGLVAALFGFLLGIPALRLEGPYLSIATLGFGLTITQ 137

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           ++ +   +  G+ G++                                YY+L+ +  L  
Sbjct: 138 VIGR-VEVFGGRQGLHTPPLTIGPWHLESDRD---------------FYYLLVFITLLLV 181

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   + +T +  A+  IRD   A  ++   + + K  AFAVS+ + G+AG  +A     
Sbjct: 182 LVARNIIKTKVGRAFIAIRDADIAAETMGVNLTYYKTLAFAVSAFYAGIAGGLYAFVLRF 241

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           I P+MF    +II + +V++GG+ S+        +L  +      +    +        S
Sbjct: 242 IEPEMFGLMMSIIFLGMVVVGGLGSIFGGIAGACLLSWLDLELRNILSIPYLGHWLEALS 301

Query: 316 --------FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                    +     +    + L++L     +      +    R
Sbjct: 302 KDYFSITGVSNIQFIIYGFIMVLIMLFEPLGIYGFWIRTKIYWR 345


>gi|257469881|ref|ZP_05633973.1| branched chain amino acid ABC transporter permease [Fusobacterium
           ulcerans ATCC 49185]
 gi|317064110|ref|ZP_07928595.1| branched-chain amino acid transport system permease livM
           [Fusobacterium ulcerans ATCC 49185]
 gi|313689786|gb|EFS26621.1| branched-chain amino acid transport system permease livM
           [Fusobacterium ulcerans ATCC 49185]
          Length = 323

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 72/336 (21%), Positives = 140/336 (41%), Gaps = 45/336 (13%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +L  V   +L   +GA    +Y  ++   I I ++ A  L++ VG LG +++      +
Sbjct: 13  FILLAVLYFILTGMIGAGFISRYQTNILTLICINIILAVSLNVTVGCLGQITIGHAGFMS 72

Query: 76  IGAYSYVILG----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           +GAY+  +              L + +  +++G  G+I+G+P+L+  GDYLAI TL   E
Sbjct: 73  VGAYAAALFAKSGIVEGIPGYILALIIGGIVAGIIGIIIGIPALRLNGDYLAIITLAFGE 132

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I + +LI++   T G  G+    R    G                         V+  + 
Sbjct: 133 IIR-VLIEYFSFTGGAQGLRGIPRFNKFG-------------------------VIYIIM 166

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +S  ++  +  +    A  +IR+++ A  +      + K  AF +S+ F G+AG  +A 
Sbjct: 167 VVSVMMMFSVMTSRHGRAVLSIREDEIASGASGINTTYYKTFAFTISAVFAGVAGGVYAH 226

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               +    F ++ +I ++ +V+LGGM S +    +   L  + E+  G + Y       
Sbjct: 227 YLGILGARQFDYNYSINILVMVVLGGMGSFTGSILSAIALTILPEVLRGFSDY------- 279

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                      +  + L + ++ R   LL  +    
Sbjct: 280 --------RMIVYSLLLIMTMIFRPTGLLGRKEFQI 307


>gi|306819906|ref|ZP_07453559.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304552063|gb|EFM40001.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 326

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 78/342 (22%), Positives = 144/342 (42%), Gaps = 45/342 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   I  L   V  +++ + + +     YI  + I + I ++ A  L+I  G LG ++L 
Sbjct: 7   KNFIINILGVSVLFIVINILIQSGMINSYISGILILVCINIVLAISLNITAGCLGQMALG 66

Query: 70  CVIAYAIGAYSYVILGS----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
                +IGAY+  +              L + +  +++   G+++G+P+L+ RGDYLAI 
Sbjct: 67  HAGFMSIGAYTAALFTKSNLIPGVGGYVLALILGGLVAMIIGVVIGIPALRLRGDYLAIL 126

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL   EI + +LI++   T G  G+                                 + 
Sbjct: 127 TLAFCEIIR-VLIEFFKFTGGAKGLTGIKLNKN-------------------------FA 160

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++  +  L   ++    ++    A  +IR+++ A  S    + F K  AFA S+ F G+A
Sbjct: 161 IIYIIMLLCVFMMYTFMKSRHGRAILSIREDEIASESSGINLTFYKTLAFAYSAFFAGVA 220

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  +A     +    F F+++I ++ IV+LGG+ S +  A    +L  + E+  G N Y 
Sbjct: 221 GGMYAHYIGILGAKNFDFNKSIDILVIVVLGGLGSFTGSAIGAIVLTILPEMLRGFNDY- 279

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                            +  + L L+++ R   LL  +  S 
Sbjct: 280 --------------RMFIYAVMLILMMMFRPSGLLGTKEFSL 307


>gi|311742278|ref|ZP_07716087.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Aeromicrobium marinum DSM 15272]
 gi|311313906|gb|EFQ83814.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Aeromicrobium marinum DSM 15272]
          Length = 331

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 126/329 (38%), Gaps = 7/329 (2%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
            G+  +     ++G   +++ + A GL+I  G  GLL+       A+GAY   +    + 
Sbjct: 3   FGSILNAALSSALGPDAIVFALAAIGLNIHFGYTGLLNFGQAGFMAVGAYGLAVSVVTFD 62

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +  W  + ++ +      +++G+P+L+ R DYLAIAT+  +EI + +    +        
Sbjct: 63  IPFWWAMCIAMLAPVLLALVLGVPTLRLRADYLAIATIATAEILRLVFGSVEMSDTLGGS 122

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             +                      SF   +++   V   +  LS  ++  L R+     
Sbjct: 123 NGLTGYASTFQDLNPYTTGLDLGIVSFRRGDLWSLTVGWILVALSCLLVWLLMRSPWGRL 182

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R+IR+++ A  SL   +   K+ A  +   F GMAG F A  +  + P  F  +     
Sbjct: 183 LRSIREDEDAVRSLGKNVFAYKMQALVLGGVFGGMAGIFLALKQASVIPTGFSTNVTFFA 242

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMN-------FYYFNSLLKFDCSFNMRHTT 322
            + +++GG   +      + I   ++                     L  +   ++    
Sbjct: 243 YTALLIGGAARVLGPVIGSIIFWFLMAGIGAFFSQATSGLDPLIPDFLMTNTQASLVRLV 302

Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLER 351
           L+ + L L+++ R   +   R       R
Sbjct: 303 LVGLGLMLLMIYRPQGIFGDRKELAIDAR 331


>gi|163736139|ref|ZP_02143558.1| inner-membrane translocator [Phaeobacter gallaeciensis BS107]
 gi|163741331|ref|ZP_02148723.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161385684|gb|EDQ10061.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161390009|gb|EDQ14359.1| inner-membrane translocator [Phaeobacter gallaeciensis BS107]
          Length = 400

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 63/369 (17%), Positives = 127/369 (34%), Gaps = 36/369 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKS-------QKYIDSMGIQILIYVMFAWGLSIVV 60
           LNK DK L L+  +  L     L    +             +  + +I+ +FA G +I+ 
Sbjct: 4   LNKKDKTLLLVVAILTLFAPFILNPFPTGSALAQFNAGYPDLMQRFVIFGIFAIGFNILF 63

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G LS        +G+YS V +     +++   I +S +++G   +++G  SL+  G 
Sbjct: 64  GLTGYLSFGHAAFLGVGSYSAVWMFKLLSMNVVPAIVLSVIVAGLFALVIGYVSLRRSGI 123

Query: 121 YLAIATLIMSEIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVR 164
           Y +I TL  +++  N+                     P   G +              + 
Sbjct: 124 YFSILTLAFAQMSFNLAYSVLTPITNGETGLQLTLDDPRVLGVSATADGSIPVTSLFGLE 183

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
               F      +       YY+   +   +  + + + R+      + ++ NQ+      
Sbjct: 184 MRSTFEMVVGPWAFQFNAGYYLCALILLAAFYLSIRIFRSPFGLMLKAVKSNQQRMNYTG 243

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                  L+AF +S  + G+AG   A+       +  +++ +  V+ + ILGG  +L   
Sbjct: 244 LNTRPYTLAAFVISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLMTILGGAGTLIGP 303

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM-------------VIALFLV 331
                 +     +   +N    +S   F           +              I   LV
Sbjct: 304 VLGAGFIKYFENIFSKINDNVLHSWFSFMPDGIEDAMVFIVHPFIGKGWHLTLGILFMLV 363

Query: 332 ILMRSHSLL 340
           ++     L+
Sbjct: 364 VIFLPGGLV 372


>gi|92114433|ref|YP_574361.1| inner-membrane translocator [Chromohalobacter salexigens DSM 3043]
 gi|91797523|gb|ABE59662.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 551

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 97/304 (31%), Gaps = 21/304 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+ A GL+I  G +G++++       +GAY+  ++         L + ++   
Sbjct: 268 LSAGSVLVLAAIGLAITFGVMGVINMAHGELIMLGAYTTWMIQQLLPGQPGLALLLAIPG 327

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                   G+   +    +L    L      + +L  +      +  +            
Sbjct: 328 GFLVAAAFGILIERSVIRFLKGRPL------ETLLATFGISLILQQLVRTVFSPLNRRVA 381

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               ++     +  +   +    VLL    + A++   +R T +    R +  N+    S
Sbjct: 382 SPDWLQGAWQINEALSLTLNRLGVLLFCLVVFAALWALMRYTRLGLEVRAVTQNRAMARS 441

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +        +  F + +   G+AG   A S+          S  +    +V+ GG+ +L 
Sbjct: 442 MGVRAARVDMLTFGLGAGVAGLAGV--ALSQITNVGPNLGQSYIVDSFLVVVFGGVGNLW 499

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L  + ++                         +++I + L I  R   L   
Sbjct: 500 GTLVAGMSLGVINQVLQPWVGAVLAK-------------VIVLIGVILFIQKRPQGLFAP 546

Query: 343 RTPS 346
           +  +
Sbjct: 547 KGRT 550


>gi|311108381|ref|YP_003981234.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310763070|gb|ADP18519.1| inner-membrane translocator 55 [Achromobacter xylosoxidans A8]
          Length = 338

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 64/322 (19%), Positives = 122/322 (37%), Gaps = 29/322 (9%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
                   Y   + +   I +M    L++++G  G +S+     + +GAY    L ++YG
Sbjct: 29  FPLVAPNSYAVGLAVTFSINLMLIASLNLLMGYCGQISMCQAGFFGLGAYVSGALSAKYG 88

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +     IP +  ++    +++ LP L+ RG YLA+ATL  + I   + ++    T G  G
Sbjct: 89  VPALASIPAALAVASTAALLIALPVLRLRGHYLAMATLGFNAILSVLFVELVDFTGGPNG 148

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +   + +   G    +  RF              +Y+      L     L L R+ I  A
Sbjct: 149 LSGVEPITVAGYAFDTDRRF--------------FYLAWAAGLLLMWGFLNLTRSRIGRA 194

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
             ++  ++    SL       K++ F + +A   +AG F+       SP+ F FS ++++
Sbjct: 195 MISVAGSEVGAASLGINTYALKVAIFVLCAAVAALAGTFYVHFNQFASPETFSFSASVLL 254

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           + +V +GG            +   V EL                   +     L  + + 
Sbjct: 255 LVMVAVGGWGKYWGPLFGALVYTAVPELLRAF---------------HDVELLLFGLGMI 299

Query: 330 LVILMRSHSLLRLRTPSNFLER 351
           LV++     L  +        R
Sbjct: 300 LVLMFFPGGLAGMAQRLCRRPR 321


>gi|157364790|ref|YP_001471557.1| inner-membrane translocator [Thermotoga lettingae TMO]
 gi|157315394|gb|ABV34493.1| inner-membrane translocator [Thermotoga lettingae TMO]
          Length = 349

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 63/341 (18%), Positives = 118/341 (34%), Gaps = 7/341 (2%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + +       +A V+   LF+         YI  +     IYV+    L+++ G  G  S
Sbjct: 1   MYRKSSFWLSVATVFAFFLFIAYAQGNFDAYILRIMNVAAIYVILGVSLNLINGFTGQFS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      AIGAY+  +L     L    +      +      I            L  A  
Sbjct: 61  LGHAGFMAIGAYTSALLYMSPELK--AMNFFIKPLIWPLNQIQIPFFPALLIGGLLAAGA 118

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                   + +K   +     G     R+ F      +            +      +  
Sbjct: 119 GFLVGAPCMRVKGDYLAIVTYGFSEIIRVLFNNLQSVTN----GPLGLKGLPTYTNLWWS 174

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
            G+   +   +  L  ++   A + IRD+++A  ++   + F K+ AF V + F G+AG 
Sbjct: 175 WGLAIFTIFFVKRLIDSSYGRALKAIRDDEEAAEAMGVNLFFHKVLAFVVGAFFAGIAGG 234

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
              +    I P+ F       ++ IV+LGG+ S++    +  ++  ++E    +      
Sbjct: 235 LLGSLVMTIDPNAFNIMLTFQIVLIVLLGGLGSITGTVISGVLIAFLMEWLRIVETPMTL 294

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             +       MR     +I +  V+  R H +L  R  S  
Sbjct: 295 FGITIPGIAGMRMLIFSIILMIAVLFFR-HGILGDREFSWE 334


>gi|114770347|ref|ZP_01447885.1| branched-chain amino acid ABC transporter, permease protein [alpha
           proteobacterium HTCC2255]
 gi|114549184|gb|EAU52067.1| branched-chain amino acid ABC transporter, permease protein [alpha
           proteobacterium HTCC2255]
          Length = 400

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 59/371 (15%), Positives = 132/371 (35%), Gaps = 31/371 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLS 57
           M   S    +    + ++A++ P +L  F   +   ++      +  +  IY + A G +
Sbjct: 1   MKSISNADTRTLYFVAIIAILAPFILNPFPTDSGLAQFNAGYPDLMQRFAIYGILAIGFN 60

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I+ G  G LS        +G+YS V +     ++I   I +S +++G   +++G  SL+ 
Sbjct: 61  ILFGLTGYLSFGHAAFLGVGSYSAVWMFKLLSMNIIPAIILSVIVAGLFSLLIGFISLRR 120

Query: 118 RGDYLAIATLIMSEIFQNILIK-WKPITNGKAG--------------IYVADRLYFLGTT 162
            G Y +I TL  +++   +      P+TNG+ G                  +        
Sbjct: 121 SGIYFSILTLAFAQMSFALAYSVLTPLTNGETGLQITLNDPRIFAAENVSGNLPVTSLFG 180

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +     +     ++       YY+      ++  + + + R+      R ++ NQ     
Sbjct: 181 MEMRDTWTLNLGAWDFQFNIGYYICAIFLLIAFYLSIRIFRSPFGMMLRAVKTNQTRLNY 240

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                    L+AF +S  + G+AG   A+       +  +++ +  ++ + ILGG  +L 
Sbjct: 241 TGINTRPYTLAAFVISGMYAGLAGGLMASMDPLAGAERMQWTASGEIVLMTILGGTGTLL 300

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALF 329
                   +     +   +N    +    +                        + I   
Sbjct: 301 GPVMGAGFIKYFENIFSKINDTVLHGWFAWMPDGLENVIVWILHLFTGKGWHLTLGIMFM 360

Query: 330 LVILMRSHSLL 340
           L+++     L+
Sbjct: 361 LIVIFLPGGLM 371


>gi|27383042|ref|NP_774571.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27356216|dbj|BAC53196.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 383

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 78/340 (22%), Positives = 133/340 (39%), Gaps = 35/340 (10%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            LL  L +       Y+ S  + + IY      L I+ G  G  SL      AIGAY+  
Sbjct: 27  ILLALLLVAPYVLSSYLMSQLVFVCIYATVGVALLILTGFTGQASLGHAAFLAIGAYTAA 86

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
               +Y +   +    + +++G  G ++G P+L+ +G YL IAT+  + I + IL +W+ 
Sbjct: 87  Y-LQKYNVPFPVYFLAAGLLTGIIGAMVGFPALRLQGIYLVIATISFALIVEEILARWES 145

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +TNG  G+               +        +        Y++ L +  L+    L L 
Sbjct: 146 VTNGNEGMR--------------VKTLSLLGVAVPRDSPTFYFLCLAVLVLTIVGTLNLL 191

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+    A+  IRD++ A  S+   +   K+ +FA+S+A  G AG  FA     ISP+MF 
Sbjct: 192 RSPTGRAFVAIRDSETAARSMGVNVALYKVKSFAISAAITGFAGVLFAHKLSFISPEMFT 251

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM--------------------N 302
              +I  I ++++GG  SL         ++ +      +                     
Sbjct: 252 LQLSIEFIIVILIGGSFSLHGAVLGAIFIVMIDPFLTYLKDDMPGIIAGIAAAFGAGTQG 311

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                S +    S N     +  I + L +L     L   
Sbjct: 312 AANVQSKVAAFASLNGLKGAIYGIIIVLFVLFEPLGLYGR 351


>gi|324997164|ref|ZP_08118276.1| ABC transporter permease protein [Pseudonocardia sp. P1]
          Length = 331

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 59/322 (18%), Positives = 119/322 (36%), Gaps = 6/322 (1%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +G   +  +   +G   + + + A GL+I  G  GLL+   +    +GAY   I  + +G
Sbjct: 4   VGQLLTVGFSQLIGPSAIFFALLALGLNIHFGYTGLLNFGQIGFALVGAYGMGISVANFG 63

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN-GKA 148
             +WL + +      A  +I+G+P+L+ R DYLAI T+  +EI + +          G  
Sbjct: 64  APLWLGVIIGMACGVALALILGIPTLRLRADYLAIVTIAAAEILRLVTRSTSQTDFTGGT 123

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                    F      +   +          +++   V   +  L   +   L R+    
Sbjct: 124 QGLTGFADAFAAANPFTQPSYDILGLEVRGPDLWAILVGWTIVGLCVLLTWLLVRSPWGR 183

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
             + IR+++ A  +L   +   K+ A ++   F  + G FFA +   ++PD +   +   
Sbjct: 184 VLKAIREDEDAARALGKNVFAYKMQALSLGGVFGALGGIFFALATQSLTPDFYSPPQTFF 243

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS-----LLKFDCSFNMRHTTL 323
             + +ILGG   +        +   ++ +                              L
Sbjct: 244 AYAALILGGAGRVFGPVIGAMLFWFLLSIADAFLRQATAGENPLLPFISSQDVGAIRFVL 303

Query: 324 MVIALFLVILMRSHSLLRLRTP 345
           +   L L+++ R   +   R  
Sbjct: 304 VGAFLGLMMVYRPQGIFGRRRE 325


>gi|262038956|ref|ZP_06012294.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Leptotrichia goodfellowii F0264]
 gi|261747010|gb|EEY34511.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Leptotrichia goodfellowii F0264]
          Length = 347

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 72/345 (20%), Positives = 141/345 (40%), Gaps = 48/345 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +  L  +V   +L L    +    Y   + I ILI ++F++ L+I VG +G LSL 
Sbjct: 24  RNYSLSFLFIIVLYFILRLSFDPSDPFNYTGGIYINILIAILFSFSLNIAVGIMGQLSLG 83

Query: 70  CVIAYAIGAYSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
                A+GAY+  +L            L + +      +I+G  G  +G  +L+ RGDYL
Sbjct: 84  HAGFIAVGAYTGAVLSKALLPYNLPPILQLTITGVAGGIIAGLFGFFVGGSTLRLRGDYL 143

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           AI TL   EI + ++     +  G  G+     +                          
Sbjct: 144 AIITLAFGEIIKYVIQNMDFL-GGATGLKNIPNIVTFDN--------------------- 181

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
               +  +  +S  I+  +  +      ++IR+N+ A  ++   I   KL  FA+S+ F 
Sbjct: 182 ----VYLISIISMLIMGMIMISRKGREIQSIRENEIAAENIGIHINKVKLYGFALSAFFA 237

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+ G+ +A +   ++PD F F  +I ++ +V+ GG+ S++    +  +L  + E     +
Sbjct: 238 GVGGSLYAHNVGVLTPDKFGFMFSIEILVMVVFGGLGSITGSILSAVLLTLLNEQLRQAS 297

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
            Y                  +  + L ++++ R   +   +  + 
Sbjct: 298 EY---------------RYLVYAVILIILMIYRPDGVFGKKEITI 327


>gi|223984823|ref|ZP_03634932.1| hypothetical protein HOLDEFILI_02230 [Holdemania filiformis DSM
           12042]
 gi|223963197|gb|EEF67600.1| hypothetical protein HOLDEFILI_02230 [Holdemania filiformis DSM
           12042]
          Length = 320

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 76/342 (22%), Positives = 144/342 (42%), Gaps = 45/342 (13%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           LNK +    +L      L+ L +          ++ + I I ++ A  L++++G  G  S
Sbjct: 5   LNKKNACWLVLIAGSYGLISLLISVGVINNVYLTVLMTIGINIILAISLNLIIGVTGQFS 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGLS---IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           L       IGAY   +   ++  S   I L + +  +ISGA  +I+ +P+L+ RGDYLAI
Sbjct: 65  LGHAGFMIIGAYCAGVAVKQFSASLGGILLGMLIGIVISGAVALIVAIPTLRLRGDYLAI 124

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           ATL   EI + I++  K                                   ++ ++  +
Sbjct: 125 ATLGFGEIIRIIILNMKITNGAA---------------------------GLILPKLIDW 157

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            V+     +   IIL   R+A   A  ++R+++ A  ++       K+ AF + +    +
Sbjct: 158 QVIFAAVVICTIIILNFCRSAQGRACISVREDEIAAEAMGINTTKYKIMAFVLGAMIASV 217

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA +A +   I P+MF F+++I ++ +V+ GGM S +    A  ++  +  +       
Sbjct: 218 AGALYAGAFYVIKPEMFTFNKSIDILVLVVFGGMGSFTGSFIAAGVIGVLNTVLQ----- 272

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                      F+     L  + L  +++ R   LL  +  +
Sbjct: 273 ----------QFSDIRMILYGLMLVGIMIFRPSGLLGTKEFT 304


>gi|224150808|ref|XP_002337013.1| predicted protein [Populus trichocarpa]
 gi|222837832|gb|EEE76197.1| predicted protein [Populus trichocarpa]
          Length = 579

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 111/264 (42%), Gaps = 14/264 (5%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             ++++ + +FA   ++++G  GLLS          AY        +G +  L +     
Sbjct: 34  FVMKLMCFALFASAFNLLLGYTGLLSFGHAAFLGGAAYVTGYAIKGWGFTPELAMLAGTA 93

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
                G+I G  +++ +G Y ++ TL ++++   + ++    T G+ G+    R      
Sbjct: 94  GGALLGLIFGWLAIRRQGIYFSMITLALAQMLFFVCLQAP-FTGGEDGLQGVPR------ 146

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F    +  ++ MYYV L +  L+  +I+    +      + I++N+    
Sbjct: 147 -------GKLFGLIDLTSDLTMYYVTLVIVVLAFLLIVRTIHSPFGQVLKAIKENEPRAT 199

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   KL AF +S+A  G+AG+         +     ++ +  VI + ++GG+ +L
Sbjct: 200 SLGYDVARFKLLAFVISAALTGLAGSLKTVVLGFATLSDVHWTTSGHVILMTLMGGLGTL 259

Query: 282 SKIAKATAILIGVVELCCGMNFYY 305
           S     +A+++ +         + 
Sbjct: 260 SGPILGSAVVVMLENKIGEFGSFL 283


>gi|73540690|ref|YP_295210.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72118103|gb|AAZ60366.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 553

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/298 (13%), Positives = 89/298 (29%), Gaps = 31/298 (10%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRY-------GLSIWLLIPVSAMISGACGMIM 110
           I  G +G++++       IGAY+  ++ + +                 ++ ++      +
Sbjct: 279 ITYGLIGVINMAHGEFLMIGAYATYVVQTLFRTYAPGAFDWYLPAALPASFLAAGIVGFV 338

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
               +        + TL+ +     +L++      G   + VA+  +  G          
Sbjct: 339 LERLVLRHLYGRPLETLLATFGVSLLLMQAVRTLFGAQNVEVANPAWMSGGVEWMP---- 394

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                 ++       ++L    + A     L RT +    R    N+     +       
Sbjct: 395 -----GLVIPYNRIVIILFALAVVAVAWAVLNRTRLGLFVRATTQNRTMAACVGVRTWKV 449

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
              AFA  +   G+ G   A S+          +  I    +V+LGG+  L+        
Sbjct: 450 DSYAFAFGAGIAGLGGC--ALSQIGNVGPDLGQAYIIDSFMVVVLGGVGQLAGTIVGAFG 507

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
           L  + +                           +++ + L I  R   L  L+  S  
Sbjct: 508 LGIINKFIEPFYGAVLAK-------------IFVLVLIVLFIQKRPQGLFALKGRSAE 552


>gi|84499419|ref|ZP_00997707.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
 gi|84392563|gb|EAQ04774.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
          Length = 400

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 134/361 (37%), Gaps = 32/361 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
             I+ +L +  P LL  F   +   ++      +  + +I+ +FA G +I+ G  G LS 
Sbjct: 12  LIIVAILTMAAPFLLNPFPTESGMAQFNAGYPDLMQKFVIFGIFAIGFNILFGLTGYLSF 71

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                  +G+Y+ V +    G ++   I +S ++SG   +++G+ +L+  G Y +I TL 
Sbjct: 72  GHAAFLGVGSYACVWMFKLLGYNVLPGILLSIVVSGLFALLIGVITLRRSGIYFSILTLA 131

Query: 129 MSEIFQNILIKW-----KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS-------- 175
            +++   +           +TNG+ G+ V         + R       F  S        
Sbjct: 132 FAQMSFALAYSVLSNPKFNLTNGETGLQVYADDPQWFHSDRLPDLPHLFGLSMRATHRME 191

Query: 176 ---FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
              +       YY+   +  L   + + + R+      R ++ NQ+             L
Sbjct: 192 LGAWEFQFNVGYYMCAVIMLLCFYLAIRIFRSPFGLMLRAVKSNQQRMNYTGLNSRPYTL 251

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
           +AF +S  + G+AG   +A       +  +++ +  V+ + ILGG  +L        ++ 
Sbjct: 252 AAFVISGMYAGLAGGLLSAVDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLGAGLIK 311

Query: 293 GVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVILMRSHSL 339
               +   +N    +    F                        + +   LV++     L
Sbjct: 312 YFENIFSKINESVLHGWFGFLPDGLEDFVITLVYPFVGKGWHLTLGVIFMLVVIFLPGGL 371

Query: 340 L 340
           +
Sbjct: 372 V 372


>gi|222081729|ref|YP_002541094.1| branched-chain amino acid ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221726408|gb|ACM29497.1| branched-chain amino acid ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 353

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 64/330 (19%), Positives = 134/330 (40%), Gaps = 15/330 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             +   LLLF+ +    S  ++ S+ I  L+  +    L++++G  GL+SL      +IG
Sbjct: 24  AVIAGLLLLFVAVPLGASDYWLSSIIIPTLVMGLAGISLNLLMGYAGLVSLGSAAFMSIG 83

Query: 78  AYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           A++   ++     L + +++ VS +++ A G++ GLP+L+ +G YL  +TL     F+ +
Sbjct: 84  AFTAYNLILRAPFLPLPVVLLVSGLVAAAAGVVFGLPALRIKGFYLGASTLGAQFFFEWV 143

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
              +   +N    + ++                  F    +      Y + + +      
Sbjct: 144 FSNFTWFSNDSQSLTISAPRL-------------AFLGRDLQSPAGRYLLAISVATALIG 190

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDR 255
           +   + ++ +   W  IRD   A   +   I   KL A+A+SS F+G+ G  +  A    
Sbjct: 191 LAFLIVKSRLGREWMAIRDMDTAASVIGIRIARRKLQAYAISSFFLGVTGVLWGFAYLGT 250

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
                F   ++  V+ IV++GG  ++       A ++    L   +      S L    +
Sbjct: 251 SDAHTFNLDKSFQVLFIVLIGGTATIFGNFLGAAFIVLTPILLDRIVLAANLSFLGDQGA 310

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                  +  + + L+++     L  L   
Sbjct: 311 LTNLQRVIFGVIIILILIKEPDGLAALIRR 340


>gi|110680050|ref|YP_683057.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
 gi|109456166|gb|ABG32371.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
          Length = 399

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 56/378 (14%), Positives = 128/378 (33%), Gaps = 36/378 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKS------QKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           K   +L ++A +     F+     +             +  +++I+ +FA G +I+ G  
Sbjct: 7   KDTTLLLIVACLTMFAPFILNPFPEGSAMAQFNAGYPDLMQRLVIFGIFAIGFNILFGLT 66

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G LS        +G+Y+ + +     +++   I VS +I+G   +++G  SL+  G Y +
Sbjct: 67  GYLSFGHAAFLGVGSYAAIWMMKLLTMNVIPAIMVSVLIAGLFSLLVGWISLRRSGIYFS 126

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVA---------------DRLYFLGTTVRSLIR 168
           I TL  +++  ++         G                               +     
Sbjct: 127 ILTLAFAQMSYSLAYSVLTPITGGETGLQPKVNDPRILDSALEPGQNPRANLFGLEMNQS 186

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
           +      +V      YY+   +  L+  + + + R+      R ++ NQ+          
Sbjct: 187 YELAMGGWVFTFNAGYYIAALVMLLAFYLSIRIFRSPFGMMLRAVKSNQQRLNYTGLNAK 246

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
              L+AF +S  + G+AG    A   ++  +   ++ +  V+ + ILGG  +L       
Sbjct: 247 PYTLAAFVISGMYAGLAGGLLVAMDTQVGAERMFWTASGEVVLMTILGGAGTLIGPVLGA 306

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVILMR 335
             +  +  +   +N         F                        + +   +V++  
Sbjct: 307 GFIKYMENIVSKINKTVLEQWFAFMPDGIEDFIITIVYPFVGKGWHLTLGLLFMMVVIFL 366

Query: 336 SHSLL--RLRTPSNFLER 351
              L+    +    F  +
Sbjct: 367 PGGLVQGGQKVAGLFRRK 384


>gi|84516517|ref|ZP_01003876.1| branched-chain amino acid ABC transporter, permease protein
           [Loktanella vestfoldensis SKA53]
 gi|84509553|gb|EAQ06011.1| branched-chain amino acid ABC transporter, permease protein
           [Loktanella vestfoldensis SKA53]
          Length = 398

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/333 (15%), Positives = 111/333 (33%), Gaps = 28/333 (8%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
                 +  + +I+ + A G +I+ G  G LS        +G+Y+ +       ++I   
Sbjct: 39  NAGYPDLMQRFVIFGILAIGFNILFGLTGYLSFGHAAFLGVGSYAAIWSMKLVTMNIIPS 98

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           I  + +++G   +++G  SL+  G Y +I TL  +++  ++         G         
Sbjct: 99  IIFAVIVAGVFSLVVGYISLRRSGIYFSILTLAFAQMSYSLAYSVLTPITGGETGLQIKS 158

Query: 156 LYFLGTT---------------VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
                                       +    + +       YYV   +  +S    + 
Sbjct: 159 TDTPLLDKALEAGEIGRANLFGYGMGSSYQLELAGWQFTFNLGYYVAAVVMLISFYFAIR 218

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           + R+      R ++ NQ+       +     L+AF +S  + G+AG    A   ++ P+ 
Sbjct: 219 IFRSPFGMMLRAVKSNQQRMNYAGLSPKPYTLAAFVISGMYAGLAGGLLVAMDTQVGPER 278

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
             ++ +  ++ +VILGG  +L         +     +   +N         F        
Sbjct: 279 MFWTASGEIVIMVILGGAGTLLGPVLGAGFIKYFENIISKINESILQGWFAFLPDGLQDF 338

Query: 321 TTL-------------MVIALFLVILMRSHSLL 340
                           + I   LV++     L+
Sbjct: 339 MVAVVYPFIGKGWHLTLGIMFMLVVIFLPGGLI 371


>gi|313122404|ref|YP_004038291.1| branched-chain amino acid ABC-type transport system, permease
           component [Halogeometricum borinquense DSM 11551]
 gi|312296748|gb|ADQ69344.1| branched-chain amino acid ABC-type transport system, permease
           component [Halogeometricum borinquense DSM 11551]
          Length = 656

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 66/324 (20%), Positives = 129/324 (39%), Gaps = 15/324 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           AVV  L +           Y  ++   +LI+ +FA  L +V+G  GL+SL   + Y +GA
Sbjct: 319 AVVTALAVVPLFAELTGITYAVTLLEDMLIWALFALSLDLVLGYAGLVSLGHALFYGVGA 378

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+ V+       S+++ + V+ ++  A   ++G  S++  G + A+ TL  +++F N + 
Sbjct: 379 YAAVLSLMHVTPSVFVALAVAIIVCAAIAWVIGYLSIRVSGVFFAMITLAFAQLFYNAVF 438

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           K+K          V       G  +        F    +   +  YY L+ +      + 
Sbjct: 439 KFKWTGGSDGLFGVDTFYGLAGVGIDLSAFELAFGPVILDGGLVRYYFLVLVVVGGYLLA 498

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R       + IR++++    +   +   K  AF VS    G+AG  FAA+   ++P
Sbjct: 499 RRLIRAPFGTVLQAIRESEERASFVGYDVTAYKRRAFVVSGGLAGLAGGLFAANNGYVAP 558

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
               +  +  VI + +LGGM +L        + +   ++       +             
Sbjct: 559 SFLHWIHSGEVIVMTVLGGMGTLYGPMLGAGVFVAFEDILSSYIDQW------------- 605

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
               ++     L ++     L+ L
Sbjct: 606 --QLVIGTLFVLFVIFVPRGLVSL 627



 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/304 (16%), Positives = 105/304 (34%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLSIWLLIP 97
           + +     ++YV+ A GLSI+ G + +++      +A+GAY ++ I     G   W+ + 
Sbjct: 11  VLNGLTVGMVYVLLAAGLSIIFGVMDVINFAHGELFALGAYFAFAIAAPLGGAGFWVALV 70

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            + ++    GM +   +++       +  ++++     I+        GKA         
Sbjct: 71  AAPLLVAVVGMGIERLAVRRLYGRDPLYHILLTFGLVLIINDLITAVWGKAAKPFPIPAA 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                                Y ++ Y +++    L+    L L RT      R    ++
Sbjct: 131 LDQP----------VTLLGFTYSLYNYGIVIFGAMLAIGTWLLLNRTKFGMIIRAGSQDR 180

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +   +L   +       F   +A  G+AG    A ++         S  I    IV+LGG
Sbjct: 181 EMVRNLGINVDTYYTLTFGFGAALAGVAGIVLGAFQNV--SPTMGNSVIIPAFVIVVLGG 238

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S          +  V  L      +                  ++ + +  V+L+R +
Sbjct: 239 LGSFRGAVVGGLFVGVVQTLARTYTPFLEG--------------LIVFLLMIAVLLVRPN 284

Query: 338 SLLR 341
            L  
Sbjct: 285 GLFG 288


>gi|18181869|emb|CAD20766.1| integral membrane protein [Rhizobium leguminosarum bv. viciae]
          Length = 331

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 71/311 (22%), Positives = 122/311 (39%), Gaps = 25/311 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                +YI    I  LI+++ A GL+++VG  GLLSL     + IGAY+  +L   YG  
Sbjct: 31  PFIGSRYITHSLIIALIFMLPAHGLNLLVGYTGLLSLAQAAFFGIGAYTAGLLAVTYGTP 90

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            ++ +  +  +SG   + +G+P+L+ R     + TL    I Q I   W  +T G  G+ 
Sbjct: 91  FYVNLIAAGAVSGPVALPLGIPALRLRSTSFVMCTLGFVIIGQAIAKNWVSLTRGDMGLS 150

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              + YF               S  V      YY+ L +  L+   +  + R+       
Sbjct: 151 SIPKPYFEL----------GPLSFTVSGTTNFYYLALIIGTLATFAVWAIVRSPAGRNMV 200

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            IR+N+    SL       KL  F +S+ F G+ G  +A     +SP  F+   +  ++ 
Sbjct: 201 AIRENETLAESLGVPTWHYKLIVFMISAVFAGVGGCLYAYYLTVVSPLTFQMYYSTTMLI 260

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           IV+ GG   +S     + + +G+ E                             + L ++
Sbjct: 261 IVLGGGAGMISGTVFGSLLFVGLTEALR---------------ITPELRMIAYGVCLLVL 305

Query: 332 ILMRSHSLLRL 342
           +         L
Sbjct: 306 VFWFKKGCAPL 316


>gi|56420196|ref|YP_147514.1| branched-chain amino acid ABC transporter permease [Geobacillus
           kaustophilus HTA426]
 gi|261419897|ref|YP_003253579.1| inner-membrane translocator [Geobacillus sp. Y412MC61]
 gi|319766712|ref|YP_004132213.1| inner-membrane translocator [Geobacillus sp. Y412MC52]
 gi|56380038|dbj|BAD75946.1| branched-chain amino acid ABC transporter (permease) [Geobacillus
           kaustophilus HTA426]
 gi|261376354|gb|ACX79097.1| inner-membrane translocator [Geobacillus sp. Y412MC61]
 gi|317111578|gb|ADU94070.1| inner-membrane translocator [Geobacillus sp. Y412MC52]
          Length = 345

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 66/324 (20%), Positives = 129/324 (39%), Gaps = 28/324 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +     L L      +  Y   M     I+++  +GL++  G  G LSL     +AIG
Sbjct: 9   LWIAVLAALALAFPLLVTNSYYLHMMTISFIWMIAVYGLNLFAGYTGYLSLAHAGFFAIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL  + G+  WL   ++ + +   G ++GL +L+ +  + AI TL +  I   I+
Sbjct: 69  AYALGILTVKAGVPFWLAFVLACLFTTLLGAVIGLVALRTKEHFFAIYTLCVGYIIYLII 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW  +T G  G                               +  YY++L         
Sbjct: 129 DKWDSLTGGVRGFIGIPAPAD-------------IGPLSFQTPVAQYYLVLCFLVAVIFT 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  +     +  IR++++   +L  + +  KL++F +S  F  +AGA +A+    + 
Sbjct: 176 MYRLVYSLTGRTYIAIRNSEELALTLGISTMKNKLASFVLSVFFTSLAGALYASFIRFLG 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           PD+   S     ++ +++GG+ +L+     T ++  + +    +  Y             
Sbjct: 236 PDIAYVSVMFDFLTYLLVGGIGTLAGPVVGTLLITFLSQQLQFLQDY------------- 282

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                +    L L+I+   H +  
Sbjct: 283 --RMLIFGPVLTLLIIFYPHGIAG 304


>gi|310778219|ref|YP_003966552.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Ilyobacter polytropus DSM 2926]
 gi|309747542|gb|ADO82204.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Ilyobacter polytropus DSM 2926]
          Length = 330

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 71/329 (21%), Positives = 137/329 (41%), Gaps = 41/329 (12%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++ +V   + FL +       Y   + I + I ++ A  L++V+G  G L+L      +
Sbjct: 12  GIVVMVIYSIFFLLIQTGALNPYYGQILIVLGINIILAVSLNLVIGFTGQLALGHAGFMS 71

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IG Y+  I+   Y L  ++ + +  ++S   G ++G+P L+ +GDYLAI TL   EI + 
Sbjct: 72  IGGYTAAIMSLNYNLPFFISLVIGGLVSAVIGFLIGMPILRLKGDYLAITTLGFGEIIRV 131

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            ++    +  G  G+    +                               +  +   + 
Sbjct: 132 AVVNMDFL-GGPRGLAGIPKKTNFT-------------------------WVYFITLFTV 165

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            II  + R+    A  +IR+++ A  S+       K+ AF ++S F G+AG  +A     
Sbjct: 166 IIIYNIIRSPYGRAMLSIREDEIASESMGINTTKFKMMAFVIASFFAGIAGGLYAHQFMF 225

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           + P  F F ++  +++ V+ GGM SLS    AT +L  + E+      Y           
Sbjct: 226 LDPKSFDFLKSFEILTFVVFGGMGSLSGSLMATTVLTYLPEVLRTFAEY----------- 274

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                  +   +L +++L R   ++  + 
Sbjct: 275 ----RMIIYAASLVMLMLFRPQGIMGNKE 299


>gi|260890490|ref|ZP_05901753.1| hypothetical protein GCWU000323_01660 [Leptotrichia hofstadii
           F0254]
 gi|260859732|gb|EEX74232.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Leptotrichia hofstadii F0254]
          Length = 336

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 75/353 (21%), Positives = 137/353 (38%), Gaps = 48/353 (13%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+ F+    K   +  +  +   ++L        +  Y   + I ILI+V+FA  L+I V
Sbjct: 1   MNYFNKLNVKNYVVTFISIIALYIVLSFTFDPNDAFSYTKGIYINILIFVLFAVSLNITV 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLP 113
           G +G L+L      AIG YS   +            L + L+     +++   G ++G  
Sbjct: 61  GLMGQLNLGQAGFIAIGGYSAAFISKILVNYNLPPFLQLILVSLFGGLVAAVFGFLVGGS 120

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
           +L+ RGDYLAI TL   EI + I+     +        +   L F  T    +I      
Sbjct: 121 TLRLRGDYLAIITLAFGEIVKYIIQNLDFLGGATGLNNIPTILDFSNTYFIVVISIIVIA 180

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
            +                            +       +IR+++ A  ++   +   KL 
Sbjct: 181 MAMT--------------------------SRKGKEILSIREDEIAAENIGIGLNRVKLY 214

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            FA S+ F G+ G+ FA +   ++PD F F  +I ++ +V+LGG+ S++    A  IL  
Sbjct: 215 GFAFSAFFAGVGGSLFAHNIGILTPDKFGFLFSIEILVMVVLGGLGSITGAIIAATILTL 274

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
           + E    +               +     +  I L  +++ R   +   +  +
Sbjct: 275 LNERLRDV---------------SQFRYLVYAIILISLMIFRPKGIFGTKEFT 312


>gi|146342436|ref|YP_001207484.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. ORS278]
 gi|146195242|emb|CAL79267.1| Putative branched-chain amino acid ABC transporter (permease
           protein) [Bradyrhizobium sp. ORS278]
          Length = 332

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 69/327 (21%), Positives = 119/327 (36%), Gaps = 30/327 (9%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           +  L +      +Y   +  Q  +  + A GL++ +G  G +SL       +GAY   IL
Sbjct: 17  IAGLIIIPMNFNRYGLYILSQWAVMTIAAMGLNLTLGYAGQVSLAQGAFVGMGAYGAAIL 76

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            +     +   + +  +I    G ++G P+L+ +  YLA  TL  S +   +      +T
Sbjct: 77  TTHGWP-LIAALGLVIVICFIVGWLLGYPALRVQHHYLAFVTLAFSTLMFLVFRNETWLT 135

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
           NG  GI    R                         +  YY+ LG   L    + WL R+
Sbjct: 136 NGIYGISNIPRPEVF--------------GFPTRKPLPFYYLCLGSLALVTLAMWWLIRS 181

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
               A+  +R+N     SL        L AFA+ S   G+AG  +A     + P  F   
Sbjct: 182 PWGRAFMALRENPIRAQSLGIDTRRYTLMAFAIGSVLGGIAGVLYAPLTQYVDPVPFNLQ 241

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
            ++ ++ +VI+GG   +        I + + E       YY                 L 
Sbjct: 242 LSLDLLMMVIVGGAGFMLGPFLGAMIAVLLPEWLRVAEGYY---------------LMLY 286

Query: 325 VIALFLVILMRSHSLLRLRTPSNFLER 351
            IA+  +++     +L +        R
Sbjct: 287 AIAVIALLIYSPTGILGILDRYLSSRR 313


>gi|218516129|ref|ZP_03512969.1| amino acid ABC transporter, permease protein [Rhizobium etli 8C-3]
          Length = 369

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 107/260 (41%), Positives = 154/260 (59%), Gaps = 4/260 (1%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
             + K   L  V+YP+++   +GA  S K++D+ GIQILIYVM AWGL+IVVG  GLL L
Sbjct: 105 RHFLKFALLALVLYPVVIVALVGAQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDL 164

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
             V  YA+GAYSY +L S +GLS W+L+P+S  ++   G+I+G P L+ RGDYLAI TL 
Sbjct: 165 GYVAFYAVGAYSYALLSSYFGLSFWVLLPLSGTLAALWGVILGFPVLRLRGDYLAIVTLA 224

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR----SLIRFFRFPSSFVIYEIFMY 184
             EI + +LI W  +T G  GI    +    G           + F  P S   Y+IF++
Sbjct: 225 FGEIIRLVLINWTDVTKGTFGISSIPKATLFGIPFDATAGGFAKLFHLPMSSAYYKIFLF 284

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y++L +C L+A + + LRR  I  AW  +R+++ A  SL    +  KL+AFA  + F  +
Sbjct: 285 YLILALCMLTAYVTIRLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFRRL 344

Query: 245 AGAFFAASRDRISPDMFKFS 264
             +FFAA +  +SP+ F F 
Sbjct: 345 RSSFFAARQGFVSPESFIFL 364


>gi|302342447|ref|YP_003806976.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075]
 gi|301639060|gb|ADK84382.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075]
          Length = 350

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 123/329 (37%), Gaps = 19/329 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              +     ++     F    +  +  Y   +   I I+V+ A GL+++ G  G +SL  
Sbjct: 23  RVAMAAFAVLLLAFPFFSDWLSGLTNLYWLGIMTHICIFVLGAQGLNLLTGFTGQISLGH 82

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A+GA++  +L    G +  L I    +++ A GMI G+PSL+ RG YLAIATL   
Sbjct: 83  GAFMAVGAFTAGVLHMDLGWNFLLAILAGGLMAAALGMIFGVPSLRLRGLYLAIATLAAQ 142

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            I   +L                             +            +   YY+ L  
Sbjct: 143 IIIIWLLRGVFE-------------------AGAVEVSDATLFGFSFDTDQRKYYLCLFF 183

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L    +  L RT    A+  +RD   +   +   +   ++ +F +SS  +G+AG  +A
Sbjct: 184 AALGTLYLKNLMRTRTGRAFVAVRDRYLSAEVIGVNLFKYRILSFGISSFMVGLAGGLWA 243

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            + + ++ + F  + ++  ++ +I+GG+  ++        L  +  L             
Sbjct: 244 FTENAVTDEAFGVALSVKYLAYIIVGGLGQVTGAIFGVTFLELLHWLLEVPTDALSRIFP 303

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSL 339
                       +  + + + ++     L
Sbjct: 304 NIFEKLASLREIVFGLIVIVFLIFEPDGL 332


>gi|148260058|ref|YP_001234185.1| inner-membrane translocator [Acidiphilium cryptum JF-5]
 gi|146401739|gb|ABQ30266.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Acidiphilium cryptum JF-5]
          Length = 328

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 64/325 (19%), Positives = 126/325 (38%), Gaps = 26/325 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           + A +  L L        +      +  ++L+Y M A GL++++G  G LS      + +
Sbjct: 22  ISAAIIWLALLFVPIWLPAVGGFTDLASRVLVYAMAATGLNLLLGYTGGLSFGHAAYFGL 81

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY   +       S+ L +    ++ G  G+++G   +K +G Y ++ T+   ++F  +
Sbjct: 82  GAYGTGLFIIHVIPSMPLALIAGTLLGGIGGILVGPMVMKRKGIYFSMITIAFGQMFYFL 141

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            ++W  +T G+ G            T  S +       +  +     YYV+L +  +   
Sbjct: 142 AVRWNTVTGGEDG-----------LTGFSRVPLHLGGETINLGPARFYYVVLALFAVVML 190

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++  + R+ + +A+   R+N      L   +      AFA+S+    +AG+  A      
Sbjct: 191 VVWQILRSPMGHAFVATRENTTRLRFLGVAVDKQVWVAFAISAFITALAGSLNAMLTAFA 250

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SPD  ++  +   + I +LGGM S         I I   +    +               
Sbjct: 251 SPDDLQWQLSGSFVVICVLGGMRSFWGPFLGAVIYIVAQDYLSSV--------------- 295

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                T + +   L +L     LL 
Sbjct: 296 TQNWMTYIGLIFVLSVLFFPQGLLG 320


>gi|121281862|gb|ABM53495.1| putative permease protein LivM [uncultured bacterium CBNPD1 BAC
           clone 67]
          Length = 315

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 68/325 (20%), Positives = 128/325 (39%), Gaps = 31/325 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             VV   L+   L       Y   +   + I+ + A GL++++G  G +SL       +G
Sbjct: 10  AIVVGLGLVLAILPLLFPSNYYFRVAAIVNIFALAAVGLNLLMGYAGQVSLGHAGFIGLG 69

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYS  I  + +GL       + A++S     ++G P L+ +G YLA+ATL    +    L
Sbjct: 70  AYSVAIGATHFGLHGLAAAGIGAVLSAVVAFLVGRPILRLKGHYLAVATLGFGLLIAMAL 129

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                 T G  G+ V     F                         YY+  G+  L   +
Sbjct: 130 TNEASWTGGPDGMGVPRIEVFGTRLRGPDTW---------------YYISAGVLLLGVIL 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L L  +    A R I D++ A       +   KL  F +S+ +  +AG+  A     I+
Sbjct: 175 ALNLIESPTGRAMRAIHDSEIASRVAGIDVASYKLKIFVLSAVYASVAGSLLAFLNGHIT 234

Query: 258 PDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           PD    F  ++ ++++V+LGG+ S+       A+L+ + +     + Y            
Sbjct: 235 PDGTAGFLRSVELVTMVVLGGLGSVIGAITGAAVLVILPQALTIFHDY------------ 282

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 ++ + + + +++    ++ 
Sbjct: 283 ---EHLMLGLMIMVSMILLPRGIIP 304


>gi|291615145|ref|YP_003525302.1| inner-membrane translocator [Sideroxydans lithotrophicus ES-1]
 gi|291585257|gb|ADE12915.1| inner-membrane translocator [Sideroxydans lithotrophicus ES-1]
          Length = 365

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 102/349 (29%), Positives = 157/349 (44%), Gaps = 8/349 (2%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +RLN++      LAV    L F+             +    L+Y+M A GL+IVVG  GL
Sbjct: 1   MRLNRFLTRHFALAVALLALPFIIDALFGHG--WVRITDFALLYIMLALGLNIVVGYAGL 58

Query: 66  LSLNCVIAYAIGAYSYVILGSR---YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           L L  +  YA+GAY+Y +LGS        I++++P+ A+I+   G+++G P+LK RGDYL
Sbjct: 59  LDLGYIAFYAVGAYTYALLGSPQFGLHWPIYVVLPLGALIACVFGVLLGAPTLKLRGDYL 118

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           AI TL   EI +  L       N   G      +  L     S    + +    V     
Sbjct: 119 AIVTLGFGEIIRIFLNNLNAPVNITNGPQGITGIDPLQVGGFSFGSSYEWMGIRVDDVHL 178

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            YY+ L    L   +   L  + I  AW  IR+++ A  ++       KL AFA+ + F 
Sbjct: 179 HYYLFLAFTLLVIFVSRRLENSRIGRAWVAIREDEVAASAMGINTRNIKLLAFAMGATFG 238

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G++G  FA  +  +SP+ F   E+I+V+ +V+LGGM ++  +     +L+ + EL     
Sbjct: 239 GISGGLFAGFQGFVSPESFSLMESIMVLCMVVLGGMGNVGGVVLGGVLLVALPELFRNAA 298

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIAL--FLVILMRSHSLLRLRTPSNFL 349
                +LL            LM   L   LV+L R   L          
Sbjct: 299 GPVQQALLGKVVLDPESLRMLMF-GLALILVMLWRPAGLWPSTQRRREF 346


>gi|296327741|ref|ZP_06870280.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
 gi|296155088|gb|EFG95866.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
          Length = 326

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 74/335 (22%), Positives = 138/335 (41%), Gaps = 45/335 (13%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L  V   +LF  + +    +Y   + I ILI V+ A  L++ VG LG ++L      +I
Sbjct: 14  VLLTVLYFILFSLISSGFISRYQVGILILILINVILAASLNVTVGCLGQITLGHAGFMSI 73

Query: 77  GAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           GAY+  +L             + + +  +++G  G I+G+P+L+  GDYLAI TL   EI
Sbjct: 74  GAYTAALLTKSGLLSGYPGYVVALIIGGLVAGIIGFIIGIPALRLTGDYLAIITLAFGEI 133

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            + +LI++   T G  G+    R+                             ++  +  
Sbjct: 134 IR-VLIEYFKFTGGAQGLTGIPRVNNFT-------------------------LIYFITI 167

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            S   +  +  +    A   IR+++ A  +      + K  AF +S+ F G+AG  +A +
Sbjct: 168 FSVIFMYSVMTSRHGRAVLAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGGIYAHN 227

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              +    F ++ +I ++ +V+LGGM S +    +  +L  + E+      Y        
Sbjct: 228 LGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAIVLTILPEVLRSFAEY-------- 279

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                     +  + L +++L R   LL       
Sbjct: 280 -------RMIVYPLILIIMMLFRPKGLLGREEFQI 307


>gi|126731167|ref|ZP_01746975.1| branched-chain amino acid ABC transporter, permease protein
           [Sagittula stellata E-37]
 gi|126708469|gb|EBA07527.1| branched-chain amino acid ABC transporter, permease protein
           [Sagittula stellata E-37]
          Length = 643

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/321 (13%), Positives = 110/321 (34%), Gaps = 26/321 (8%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--- 86
           + A+++            IY + A GL+I  G +G++++       +GAY+  ++     
Sbjct: 344 VAASQTADLALDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQQFVP 403

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            Y +S+ + +P++  I+ A G+ M    +++   +  + TL+ +      L +      G
Sbjct: 404 NYTVSLVVALPLAFAITFAAGVAMERLVIRW-LYHRPLETLLATFGISIALQQLAKNIFG 462

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                +              +      +  +        + +        ++  L++T +
Sbjct: 463 TQARPLTSPA---------WLDGNLAFNEVISISYIRIAIFVLALLFLGLLLFILKKTRL 513

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R +  N     S+       K+  F + S   G+AG          S     +   
Sbjct: 514 GLEVRAVTQNPGMAASMGINPDRIKMMTFGLGSGIAGIAGVAIGLYAKVTSEMGSDYIVQ 573

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             +  +V    + ++        ++  +              +  F+ S  +   T M++
Sbjct: 574 SFMTVVVGG--VGNVWGTLAGAGLIGILQ-----------KGIEWFNPSNTLAAQTYMIL 620

Query: 327 ALFLVILMRSHSLLRLRTPSN 347
            + L I  R   ++ L+  + 
Sbjct: 621 FIILFIQFRPKGIVALKGRAA 641


>gi|326796852|ref|YP_004314672.1| Monosaccharide-transporting ATPase [Marinomonas mediterranea MMB-1]
 gi|326547616|gb|ADZ92836.1| Monosaccharide-transporting ATPase [Marinomonas mediterranea MMB-1]
          Length = 599

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/332 (15%), Positives = 110/332 (33%), Gaps = 31/332 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++  +     L       +  ++   I +Y +   GL ++ G  G+ S        + A
Sbjct: 5   ILIILVACVALLAPLVLPSFQITLLNYIGLYALVVLGLVLLTGVGGMTSFGQAAFVGLSA 64

Query: 79  YSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
           Y+              S    S W  +    +++ A  +I+G  +L+  G YL + T+  
Sbjct: 65  YTTTYLTTTAALPDWLSWTNGSPWFGLVFGLLLTAAIALILGALTLRLSGHYLPLGTIAW 124

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                           G  G+     L F    +                    +YV+  
Sbjct: 125 GISLYYFFGTMTS-MGGHTGVSDIPPLTFFRLILDQGEEM--------------FYVIWV 169

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  I   L  +    A R ++  Q    ++      +K+ AF +S+ F  ++G  +
Sbjct: 170 ILAAAMFITHNLLSSREGRAIRALKGGQLMAEAMGVNTFRSKMIAFVISALFAALSGWLY 229

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A ++  I+P  F     I  + + ++GG++S+         L  + +    +      S 
Sbjct: 230 AHTQRFINPSPFGLHMGIDYLFMALIGGVSSVWGALLGAGTLTIMKQWLEDLLPLILGSD 289

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                      + +  + + L++      L  
Sbjct: 290 -------GQYESIVFGLLIVLLMQRSPSGLWP 314


>gi|227820497|ref|YP_002824468.1| branched-chain amino acid ABC transporter [Sinorhizobium fredii
           NGR234]
 gi|227339496|gb|ACP23715.1| putative branched-chain amino acid ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 323

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 66/328 (20%), Positives = 122/328 (37%), Gaps = 30/328 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           LA +   L  L L       Y   +    L+Y + A GL++ +G  G +SL       IG
Sbjct: 6   LATLVAGLAILILLPLTQSNYGVFVLCSWLVYSISAMGLNLTLGYAGQVSLAQASFMGIG 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   ++           +  + ++    G ++G P+L+ +  +LA  TL  + +   +L
Sbjct: 66  AYVTALMTMAGVPWP-AAMIAAMVLCFVIGFLLGYPALRVQHHFLAFITLAFNALVVLVL 124

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
              + +T G  GI    R                         +  Y+ +L +  L A  
Sbjct: 125 RNEEWLTGGTYGIVGIPRPE--------------VLGLPTQTPLAFYFFVLALFVLMAVA 170

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  + R+     ++ +R+N     SL   I    L AFA+ S++ G+AG+  A     I 
Sbjct: 171 LYGIIRSPWGRTFKALRENPIRANSLGVDIRKTTLLAFAIGSSYGGLAGSLLAQLTQFID 230

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F  + ++ V+ +VI+GG            +++   E       YY            
Sbjct: 231 PHSFGLTISLKVLLMVIVGGAGFFFGPILGALLIVLAPEFLRFTEGYY------------ 278

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTP 345
                +    + ++++     LL L   
Sbjct: 279 ---LMIYATLVIVLMVFCPTGLLGLVER 303


>gi|55379694|ref|YP_137544.1| branched-chain amino acid ABC transporter permease [Haloarcula
           marismortui ATCC 43049]
 gi|55232419|gb|AAV47838.1| branched-chain amino acid ABC transporter permease protein
           [Haloarcula marismortui ATCC 43049]
          Length = 363

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 61/332 (18%), Positives = 129/332 (38%), Gaps = 15/332 (4%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +  +I  +L  V  + +F FL       Y   +   +LIY +FA G  I++G  GLLS  
Sbjct: 32  RDREISTVLLTVVGVAVFPFLFNNFLDGY-TQLATLMLIYGIFAVGFDILLGYTGLLSFG 90

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
             + +   AY+  I  +    S  L++      +     I+G  SL+  G Y   A L +
Sbjct: 91  HAVFFGGAAYAAGIFSASVSSSPLLVLLAGTAFAVLLAWIVGFLSLRRGGIYF--AILTL 148

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +    +  +   P+     G      +          I         ++ +  +Y  +  
Sbjct: 149 TFGQMSFYLAASPLAFLTNGENGFTSVDIGSLLGVIDIHGGVPFPLSMLVDNMLYVFVAV 208

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           M  LS ++   +  +     +R IR+N++    +   +   KL AF +S+AF G+AG+ F
Sbjct: 209 MTVLSVAMANRILHSPYGTVFRAIRENERRAEFVGLDVWRYKLMAFIISAAFAGIAGSLF 268

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
               + +      ++E+  ++ + +LGG+ SL        + + +  +  G         
Sbjct: 269 TIEGNYVPLQSLYWTESGRIVIMTVLGGVGSLFGPLFGAGLYLYIENIVSGFE------- 321

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                +       ++ +   + +++  + +  
Sbjct: 322 -----TLGPFWHLILGVVFVVAVILFPNGIWG 348


>gi|23012896|ref|ZP_00052878.1| COG4177: ABC-type branched-chain amino acid transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 356

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 64/324 (19%), Positives = 131/324 (40%), Gaps = 18/324 (5%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
                +L           Y+ ++ IQI  Y + A GL+I+VG  G +SL     +  GA+
Sbjct: 31  WCMAGILLAAAAPLVLSNYLMALLIQIGFYGIAALGLNILVGCTGQISLGHAAFFGFGAF 90

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +   L + +G+ + L IP++ +++   G++ G+P+ + +G YLAIAT     I ++   +
Sbjct: 91  ASAWLNNTFGIPVLLAIPLAGVMTTLLGLLFGIPAGRLKGLYLAIATFASQFILEDFFAR 150

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
               T G +G        F          F+      VI                  +  
Sbjct: 151 ANWFTGGSSGAMANPISLFGYEVGGDKGFFYVVLVFVVI---------------MYGLGT 195

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L R+    A+  +RD+  +   +   +   ++ +F +SS + G+ GA +      +S +
Sbjct: 196 NLLRSRDGRAFVAVRDHYLSAEVMGINLTKYRILSFGISSFYAGVGGALYGHYLGYVSAE 255

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF---YYFNSLLKFDCSF 316
            F    +I  + ++I+GGM S+      T  ++ + E          ++   +     + 
Sbjct: 256 GFTILLSIQFLGMIIIGGMGSVMGTLMGTTFMVLLPEATEAAVSTVKHFTGDIPALTSAL 315

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
                  + +A+ L ++     L+
Sbjct: 316 AYIKEASIGLAIVLFLIFEPDGLV 339


>gi|288553812|ref|YP_003425747.1| ABC transporter permease [Bacillus pseudofirmus OF4]
 gi|288544972|gb|ADC48855.1| ABC transporter permease protein [Bacillus pseudofirmus OF4]
          Length = 341

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 59/328 (17%), Positives = 126/328 (38%), Gaps = 31/328 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L ++   +           +    M  QI I+ +FA    I++G  G++S    + + IG
Sbjct: 12  LTLLVLAIGLAIFPFVSDSRTALIMLTQIFIFAVFAMSYDILLGYTGIVSFGHAMFFGIG 71

Query: 78  AYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AY+  I    +     + ++ I ++ + +G    ++G+ +L+ +  + A+ TL +S +F 
Sbjct: 72  AYTVAICLKMFGSTMPAFFVAIVLTLIFTGVVSYLVGILTLRLKSHFFAMLTLAVSSLFL 131

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
               KW+ +T G  G        F                      +  Y + L +   +
Sbjct: 132 VTAEKWRSLTMGNDGFTFVVPELFRDR-------------------VSFYLIALVLLVGT 172

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +    ++ +    + IR+N+    SL   ++  K+ A  V+    G+AG  +A S  
Sbjct: 173 YIFLDRFTQSPMGKVLQAIRENEPRVESLGFKVMHYKVIANVVAGMVAGLAGILYAMSLR 232

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++  +     ++ V+ I I+GG+ +L       AI+         +   ++        
Sbjct: 233 FVNTAVLSVELSLDVLLITIIGGVGTLFGSVVGAAIIELARHGLMDLAKVHW-------- 284

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
               R   L  I   LV++     ++  
Sbjct: 285 -IFERWVILFGIIFILVVMFFPKGIVGT 311


>gi|227824482|ref|ZP_03989314.1| inner-membrane translocator [Acidaminococcus sp. D21]
 gi|226904981|gb|EEH90899.1| inner-membrane translocator [Acidaminococcus sp. D21]
          Length = 315

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 67/332 (20%), Positives = 131/332 (39%), Gaps = 41/332 (12%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
                    +L++ L       + +   + I+I ++ A  L+++ G  G  S+     +A
Sbjct: 12  LGFCAALFAVLYVLLEMEIIGAFWELNLVLIIINIILATSLNMINGYTGQFSIGHAGFFA 71

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY   I+  + G  + + +    + +G  G ++GLP+L+  GDYLAIATL + EI + 
Sbjct: 72  VGAYMGAIMTVKLGYDMPVALIAGTLSAGLLGFLVGLPTLRLNGDYLAIATLGLGEIIRI 131

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            ++  + +  G +G+    RL                             +   +     
Sbjct: 132 CILNIEYV-GGASGLMGIPRLTTFP-------------------------LAFWIMIAIL 165

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             I   + +A   A   IR+N+ A  ++       K+ AF + ++F G AG  F+     
Sbjct: 166 FFIKNFKNSAYGRACLAIRENEIAADTMGIDTTCYKVMAFTLGASFAGTAGVLFSHYFFI 225

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
             P  F F  +  ++++V+LGG+ S++       +L  +                     
Sbjct: 226 AHPASFTFMRSFDILTMVVLGGLGSMTGSITGAIVLTFISAALS---------------D 270

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
           F      +  IA+ +++L R   L   +  S 
Sbjct: 271 FPEWRMLIYSIAMIVLMLYRPQGLFGDKELSL 302


>gi|254304399|ref|ZP_04971757.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter membrane protein [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
 gi|148324591|gb|EDK89841.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter membrane protein [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
          Length = 326

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 76/335 (22%), Positives = 140/335 (41%), Gaps = 45/335 (13%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L +V   +LF  + +    +Y   + I ILI V+ A  L++ VG LG ++L      +I
Sbjct: 14  VLLIVLYFILFSLINSGFISRYQVGILILILINVILAASLNVTVGCLGQITLGHAGFMSI 73

Query: 77  GAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           GAY+  +L             + + V  +++GA G I+G+P+L+  GDYLAI TL   EI
Sbjct: 74  GAYTAALLTKSGFLSGYPGYIVALIVGGLVAGAIGFIIGIPALRLTGDYLAIITLAFGEI 133

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            + +LI++   T G  G+    R+                             ++  +  
Sbjct: 134 IR-VLIEYFKFTGGAQGLTGIPRVNNFT-------------------------LIYFITI 167

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            S   +  +  +    A   IR+++ A  +      + K  AF +S+ F G+AG  +A +
Sbjct: 168 FSVIFMYAIMTSRHGRAILAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGGIYAHN 227

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              +    F ++ +I ++ +V+LGGM S +    +  +L  + E+      Y        
Sbjct: 228 LGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAIVLTILPEVLRSFAEY-------- 279

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                     +  + L +++L R   LL       
Sbjct: 280 -------RMIVYPLILIIMMLFRPKGLLGREEFQI 307


>gi|257453185|ref|ZP_05618484.1| branched chain amino acid ABC transporter permease [Fusobacterium
           sp. 3_1_5R]
 gi|257467351|ref|ZP_05631662.1| branched chain amino acid ABC transporter permease [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315918481|ref|ZP_07914721.1| branched-chain amino acid transport system permease livM
           [Fusobacterium gonidiaformans ATCC 25563]
 gi|317059719|ref|ZP_07924204.1| branched-chain amino acid transport system permease livM
           [Fusobacterium sp. 3_1_5R]
 gi|313685395|gb|EFS22230.1| branched-chain amino acid transport system permease livM
           [Fusobacterium sp. 3_1_5R]
 gi|313692356|gb|EFS29191.1| branched-chain amino acid transport system permease livM
           [Fusobacterium gonidiaformans ATCC 25563]
          Length = 329

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 73/342 (21%), Positives = 142/342 (41%), Gaps = 45/342 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             I  LL  +  L + L + ++   +Y  S+ I I I ++ A  L+I VG LG +++   
Sbjct: 9   YIISFLLLFLIYLGMTLMIHSSIFSRYQLSVIILICINIILAVSLNITVGCLGQITIGHA 68

Query: 72  IAYAIGAYSYVILG----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
              ++GAY+  +             +L + +  +++G  G+++G+P+L+  GDYLAI TL
Sbjct: 69  GFMSVGAYTAALFSKSALVSGVPGFFLALLLGGIVAGVVGIVIGVPALRLNGDYLAIITL 128

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              EI + +LI++   T G  G+    +                              ++
Sbjct: 129 AFGEIIR-VLIEYFDFTGGPQGLRGIPKFNNFD-------------------------II 162

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +   S  ++  L  +    A   IR+++ A  +      + K  AF +S+ F G+AG 
Sbjct: 163 YWIMVFSVILMFSLMTSRHGRAVLAIREDEIASCASGINTTYYKTFAFTLSAIFAGIAGG 222

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A +   +    F ++ +I ++ +V+LGGM S +    A  +L  + E+    + Y   
Sbjct: 223 IYAHNLGVLGAKQFDYNYSINILVMVVLGGMGSFTGSILAAIVLTLLPEMLREFSDY--- 279

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
                          +  + L  +++ R   LL        L
Sbjct: 280 ------------RMIVYAVILIFMMIFRPKGLLGREEFQLSL 309


>gi|269964419|ref|ZP_06178661.1| putative high-affinity branched-chain amino acid transport permease
           protein [Vibrio alginolyticus 40B]
 gi|269830916|gb|EEZ85133.1| putative high-affinity branched-chain amino acid transport permease
           protein [Vibrio alginolyticus 40B]
          Length = 355

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 61/322 (18%), Positives = 126/322 (39%), Gaps = 17/322 (5%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +    ++ +         Y  ++ IQI    + A GL+I+VG  G +SL     +  GA+
Sbjct: 31  LAIAGVIAMLAAPLVLDIYFLNLFIQIAYLGIAALGLNILVGFTGQISLGHGAFFGFGAF 90

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +   L +++ + +   IP++  ++   GM+ GLP+ + +G YLAIATL    I ++   +
Sbjct: 91  ASAWLNNQFNIPVVFAIPLAGYLTMIVGMLFGLPAARIKGLYLAIATLAAQFILEDFFAR 150

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
               + G  G        F                         +Y+ L           
Sbjct: 151 ADWFSGGSYGASANPINLFGFEFTTDE---------------SFFYIALFALIFMYMWAS 195

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L R+    A+ ++RD+  +   +   +   +L +F V + + G+ GA +      +S +
Sbjct: 196 NLIRSRDGRAFVSVRDHYLSAEIMGINLTKYRLLSFGVCAFYAGIGGALYGHYLGFVSAE 255

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG--MNFYYFNSLLKFDCSFN 317
            F    +I  ++++I+GG+ S+      T  ++ + E+          F     F     
Sbjct: 256 GFTIMMSIQFLAMIIIGGLGSVKGTLMGTIFIVLLPEVLEFGVTGLSAFGDTTAFTDGLA 315

Query: 318 MRHTTLMVIALFLVILMRSHSL 339
                 + + + L ++     L
Sbjct: 316 YFKEMAIGLVIMLFLIFEPQGL 337


>gi|116695946|ref|YP_841522.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113530445|emb|CAJ96792.1| ABC-type transporter, permease component: HAAT family [Ralstonia
           eutropha H16]
          Length = 403

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 66/325 (20%), Positives = 136/325 (41%), Gaps = 20/325 (6%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +       ++  M   +L+Y     GL++  G  G+ +      + IGAY+  +L +
Sbjct: 96  LALVALFHESHFVLLMLCAVLLYTTACLGLTVQFGFSGVSNFAGAAFFGIGAYTTAVLAT 155

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+   L+I +S + +   G ++  P L+ RG Y A+ T+    I     ++   +  G
Sbjct: 156 HTGIPHVLVIVLSGLAAAVIGSVLVAPVLRTRGHYAALVTIAF-GILFKTFLEVNDVLGG 214

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             G+ V     F      S+  F       V +      + L +C  + +++  L R+ +
Sbjct: 215 PQGLQVPGMTLFGFAFNESVTLF----GVDVSFYASYALLSLLICAGTFAVVKALERSWV 270

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A   +R ++ A  +    I   K+ AF + + F G+AG+ +      ++P+ F F+++
Sbjct: 271 GLAMDVVRTDETAAAAFGLHIARWKVIAFMLGNFFAGIAGSVYGMVTAFVAPNNFTFADS 330

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           ++++SIVILGG+ ++  +  A  I++ + E    +  Y                      
Sbjct: 331 LLMLSIVILGGLGNVVGLVPAAIIVLVLPEKLQFIQEY---------------RFLFYAA 375

Query: 327 ALFLVILMRSHSLLRLRTPSNFLER 351
            +  ++L R   L+  +T   F   
Sbjct: 376 LVIAILLFRPDGLMPRKTRLFFPRE 400


>gi|254476094|ref|ZP_05089480.1| inner-membrane translocator [Ruegeria sp. R11]
 gi|214030337|gb|EEB71172.1| inner-membrane translocator [Ruegeria sp. R11]
          Length = 358

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 73/344 (21%), Positives = 137/344 (39%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ ++      +         FL +    +  + +++ +  LIY + A GL+I+VG  
Sbjct: 20  FPIKFDRIRYYAVMA------FAFLVIPFFINDYWANAILLPFLIYSIAAIGLNILVGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +   +S+++ + ++  I+    +  GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKLMTAFPEVSMFIHVLLAGGITALVCVAFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N                       F    +        
Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGQINAPERDVFGIIITGPNAPAWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L      A +   L R  +  +W  IRD   A   +    + AKLSAF VS  FI
Sbjct: 185 TYMFSLIFLTFCALVARNLTRGTVGRSWMAIRDMDIAAEIIGVNPLKAKLSAFGVSGFFI 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F A         + F  +++ +V+ +VILGG+ S+       A L+ +  +   
Sbjct: 245 GISGALFFAVYLGAVEVGEAFGINKSFLVLFMVILGGLGSIFGSFAGAAFLVLLPVILKV 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +              F      ++   + + ++   H + +L  
Sbjct: 305 VGVDVLGWPTDIVAHF---QLVIVGALIIVFLIAEPHGMAQLWR 345


>gi|28901005|ref|NP_800660.1| putative high-affinity branched-chain amino acid transport permease
           [Vibrio parahaemolyticus RIMD 2210633]
 gi|153836692|ref|ZP_01989359.1| ABC-type branched-chain amino acid transport system, permease
           component [Vibrio parahaemolyticus AQ3810]
 gi|260366216|ref|ZP_05778676.1| inner-membrane translocator [Vibrio parahaemolyticus K5030]
 gi|260879857|ref|ZP_05892212.1| inner-membrane translocator [Vibrio parahaemolyticus AN-5034]
 gi|260894532|ref|ZP_05903028.1| inner-membrane translocator [Vibrio parahaemolyticus Peru-466]
 gi|260903069|ref|ZP_05911464.1| inner-membrane translocator [Vibrio parahaemolyticus AQ4037]
 gi|28809518|dbj|BAC62493.1| putative high-affinity branched-chain amino acid transport permease
           protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|149750041|gb|EDM60786.1| ABC-type branched-chain amino acid transport system, permease
           component [Vibrio parahaemolyticus AQ3810]
 gi|308086450|gb|EFO36145.1| inner-membrane translocator [Vibrio parahaemolyticus Peru-466]
 gi|308092152|gb|EFO41847.1| inner-membrane translocator [Vibrio parahaemolyticus AN-5034]
 gi|308108396|gb|EFO45936.1| inner-membrane translocator [Vibrio parahaemolyticus AQ4037]
 gi|308114878|gb|EFO52418.1| inner-membrane translocator [Vibrio parahaemolyticus K5030]
 gi|328470907|gb|EGF41818.1| putative high-affinity branched-chain amino acid transport permease
           [Vibrio parahaemolyticus 10329]
          Length = 355

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 62/322 (19%), Positives = 129/322 (40%), Gaps = 17/322 (5%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +    ++ +         Y  ++ IQI    + A GL+I+VG  G +SL     +  GA+
Sbjct: 31  LAIAGVIAMLAAPLVLDIYFLNLFIQIAYLGIAALGLNILVGFTGQISLGHGAFFGFGAF 90

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +   L +++ + +   IP++  ++   GM+ GLP+ + +G YLAIATL    I ++   +
Sbjct: 91  ASAWLNNQFNIPVVFAIPLAGYLTMIVGMLFGLPAARIKGLYLAIATLAAQFILEDFFAR 150

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
            +  + G  G   +    F                         +YV L           
Sbjct: 151 AEWFSGGSYGASASPINLFGFEFSTDE---------------SFFYVALFALIFMYLWAS 195

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L R+    A+ ++RD+  +   +   +   +L +F V + + G+ GA +      +S +
Sbjct: 196 NLIRSRDGRAFVSVRDHYLSAEIMGINLTKYRLLSFGVCAFYAGIGGALYGHYLGFVSAE 255

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG--MNFYYFNSLLKFDCSFN 317
            F    +I  ++++I+GG+ S+      T  ++ + E+          F+    F     
Sbjct: 256 GFTIMMSIQFLAMIIIGGLGSVKGTLMGTIFIVLLPEVLEFGVTGLAAFSDNTSFIDGLA 315

Query: 318 MRHTTLMVIALFLVILMRSHSL 339
                 + + + L ++     L
Sbjct: 316 YFKEMAIGLVIMLFLIFEPQGL 337


>gi|304392929|ref|ZP_07374860.1| inner-membrane translocator [Ahrensia sp. R2A130]
 gi|303294927|gb|EFL89296.1| inner-membrane translocator [Ahrensia sp. R2A130]
          Length = 534

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/319 (14%), Positives = 98/319 (30%), Gaps = 18/319 (5%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           L    + + I        + ++ A GL+I  G +G++++       +GAY+   +     
Sbjct: 233 LAIWANAQNIWYGISLGSVLLLAAIGLAITFGVMGVINMAHGEMVMLGAYTTFAVQEFIR 292

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
            +   L   S  I+     ++           L     +     + +L  W      +  
Sbjct: 293 ATAPELFGWSLAIALPLAFLVSGTVGLIMERGL--IRFLYGRPLETLLATWGVSLILQQT 350

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +                     F    +       ++ +    + A++   + RT+    
Sbjct: 351 VRSIFGPTNREVGNPDW-MSGAFELGQLSITWNRLWIFVFAMAVFAALFFIINRTSFGLD 409

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R +  N++   ++     +     FA+ S   G+AG   A S+          S  I  
Sbjct: 410 MRAVTQNRRMAGAMGIRTSWVDAMTFALGSGIAGIAGV--ALSQIGNVSPNLGQSYIIDS 467

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             +V+ GG+ +L         L  + +                          +++IA+ 
Sbjct: 468 FLVVVFGGVGNLWGTLVGAMSLGIINKFLEPYAGAVLGK-------------VIVLIAII 514

Query: 330 LVILMRSHSLLRLRTPSNF 348
           L I  R   L  L+  +  
Sbjct: 515 LFIQKRPRGLFALKGRAVE 533


>gi|94309898|ref|YP_583108.1| inner-membrane translocator [Cupriavidus metallidurans CH34]
 gi|93353750|gb|ABF07839.1| Putative branched-chain amino acid permease protein (ABC
           superfamily) [Cupriavidus metallidurans CH34]
          Length = 545

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 80/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ + +            + +     +        
Sbjct: 271 ITYGLIGVINMAHGEFLMIGAYATYVVQTLFRACAPNAFDWYLVAAVPASFLAAGAVGFA 330

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         +        +     + +       + +
Sbjct: 331 LER--IVLRHLYGRPLETLLATFGVSLLMMQAVRTIFGAQNVEVANPAWMSGGIEALAGL 388

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++L    +       L RT +    R    N+     +          AFA 
Sbjct: 389 VIPYNRIIIILFALGVVTVAWAVLNRTRLGLFVRATTQNRTMAACVGVRTWKVDSYAFAF 448

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          +  I    +V+LGG+  L+        L  + + 
Sbjct: 449 GAGIAGLGGC--ALSQIGNVGPDLGQAYIIDSFMVVVLGGVGQLAGTIVGAFGLGIINKF 506

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   L  L+  S  
Sbjct: 507 IEPFYGAVLAK-------------IFVLVLIVLFIQKRPQGLFALKGRSAE 544


>gi|158423383|ref|YP_001524675.1| ABC transporter permease protein precursor [Azorhizobium
           caulinodans ORS 571]
 gi|158330272|dbj|BAF87757.1| ABC transporter permease protein precursor [Azorhizobium
           caulinodans ORS 571]
          Length = 603

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 91/297 (30%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++      S   L   S  I+     +  
Sbjct: 324 AAIGLAITFGVMGVINMAHGEMVMLGAYTTYVVQDIIRTSYPGLFGWSLAIALPLAFLFT 383

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       +   +     + +L  W      +  +              S      
Sbjct: 384 GLVGIIIER--TVIRFLYGRALETLLATWGISLMLQQAVRSIFGPTNKEVGAPSW-MSGA 440

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++++    +  ++++ L+RT++    R +  N++   ++        
Sbjct: 441 FDVGQLSITYNRLWIIVFALLVFFALLVVLKRTSLGLYVRAVTQNRRMAAAMGIRTGRID 500

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   A S+             I    +V+ GG+ +L         L
Sbjct: 501 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLVGALTL 558

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +L                          +++ + L I  R   L  L+  +  
Sbjct: 559 GVANKLLEPFAGAVLGK-------------IALLVFIILFIQKRPRGLFALKGRAVE 602


>gi|217969037|ref|YP_002354271.1| inner-membrane translocator [Thauera sp. MZ1T]
 gi|217506364|gb|ACK53375.1| inner-membrane translocator [Thauera sp. MZ1T]
          Length = 314

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 70/322 (21%), Positives = 125/322 (38%), Gaps = 26/322 (8%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS------ 86
                Y   M I I IY + A GL+I  G  GL +      +A+GAY+  IL S      
Sbjct: 4   LGLANYAVFMAILIGIYALLALGLNIQWGFTGLFNAGIAGFFAVGAYTSAILTSLPATGR 63

Query: 87  --RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
              Y L + +    +   +      +G   L+FR DYLAIAT+ ++EI + ++     +T
Sbjct: 64  LGGYELPLVVGWLAAMAAAALIAWPIGKICLRFRSDYLAIATIGIAEIIRLVIRTEGWLT 123

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G  G+    R +     + S               I    ++  +  ++  ++    + 
Sbjct: 124 GGVRGVTGVPRPFGDLDYMPSQ--------------IAYLAIVATLVLIAYLLVERQVKA 169

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK-F 263
                 R IRDN+ A  ++   +   +L AF   SA +G+AGA F      I+P+     
Sbjct: 170 PWGRMMRAIRDNELAAAAMGKQVEARRLQAFVFGSALMGLAGALFVHFNRSITPEAIDPM 229

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
               ++  ++ILGG  +        A++  +  +   +       +             +
Sbjct: 230 IATFLIWIMLILGGSGNNRGAILGAAVIWIIWSVSELLTDRLPTEV---AVQAKYARVFI 286

Query: 324 MVIALFLVILMRSHSLLRLRTP 345
           + + L LV+  R   +L  R  
Sbjct: 287 IGLTLQLVLRFRPEGILPERQA 308


>gi|220904340|ref|YP_002479652.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868639|gb|ACL48974.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 346

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 56/332 (16%), Positives = 109/332 (32%), Gaps = 6/332 (1%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + V+  L   ++   T    Y   +   I I  + A  L+++ G  GL SL      
Sbjct: 8   LLSILVMVLLGCAVWQAETFLGDYQIYIAKLIFINAILALSLNLIYGFTGLFSLGHAGFI 67

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GAY   +           ++ +   I      +            +            
Sbjct: 68  AVGAYVSALCILPPEQK--EMMWILEPIMWPFSELFTPFWASVLAGGVVATIFAFFIAVP 125

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    +     G     R+  +  T  +               +  Y  +L     +
Sbjct: 126 VLRLGDDYLGIATLGFAEIIRVLIVNATPITNGSLGIKGIPGHATLLACYGWVLF----T 181

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             ++  L  +   N  R IRDN+ A   +   + + K+ +F + + F G+ GA   +   
Sbjct: 182 LIVLARLVFSNYGNVLRCIRDNEIAARVMGINVFWNKVLSFCIGAFFAGVGGALLGSHLS 241

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            I P MF F     V+  V+ GG+ SL+       ++  ++E    +        L    
Sbjct: 242 TIDPKMFNFLLTFNVLMFVVAGGLGSLTGSLLGATVITILLEWLRAIEEPMDIFGLFELP 301

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                   +  + L  +IL R   ++  R  +
Sbjct: 302 GIPGMRMVVFSMVLLAIILYRREGIMGTRELT 333


>gi|163757659|ref|ZP_02164748.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Hoeflea phototrophica DFL-43]
 gi|162285161|gb|EDQ35443.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Hoeflea phototrophica DFL-43]
          Length = 404

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 58/367 (15%), Positives = 121/367 (32%), Gaps = 34/367 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKY------IDSMGIQILIYVMFAWGLSIVVG 61
             K   +L  +A +     FL                   +  + +I+ +FA G +I+ G
Sbjct: 5   QKKDFALLMFVAALTAFAPFLLNPFPVDSALAQFNAGYPDLMQRFVIFGIFAVGFNILFG 64

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G LS        +G+Y+ +       +++   I ++ +++G   + +G  SL+  G Y
Sbjct: 65  LTGYLSFGHAAFLGVGSYAAIWSMKLMTMNVIPAIILAVIVAGLFSLFVGWISLRRSGIY 124

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVA---------------DRLYFLGTTVRSL 166
            +I TL  +++   +         G                      +        +   
Sbjct: 125 FSILTLAFAQMSFALAYSVLTPITGGETGLQPKVADPRIFDAALGDGELPAANLFGLTMK 184

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
             +      ++      YYV   +  L+  + + + R+      R I+ NQ         
Sbjct: 185 SSYELNIGGWLFTFNAGYYVAAIVMLLAFYMAIRIFRSPFGMMLRAIKTNQTRMNYTGLN 244

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
                L+AF +S  + G+AG    A   ++ P+   ++ +  V+ + ILGG  +L     
Sbjct: 245 PKPYTLAAFVISGMYAGLAGGLMVAMDTQVGPERMFWTASGEVVLMTILGGAGTLIGPVL 304

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVIL 333
              ++  +  +   +N         F                        + I   LV++
Sbjct: 305 GAGMIKYMENIISKINEGVLYEWFAFLPESLQDLLVTIIYPFIGKGWHLTLGIVFMLVVI 364

Query: 334 MRSHSLL 340
                LL
Sbjct: 365 FLPGGLL 371


>gi|241766622|ref|ZP_04764473.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
 gi|241363110|gb|EER58728.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
          Length = 345

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 75/322 (23%), Positives = 132/322 (40%), Gaps = 17/322 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +      L L    +  Y   +   + I V  + GL+I+ G  GL+SL       +GA
Sbjct: 24  VWLAVAAALLVLFPFMASDYWLYLACLVSINVASSAGLNILTGYTGLVSLGQAAFMGLGA 83

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL S+ G    L I     ++   G+++G+PSL+ +G YLAIAT+  S I   +  
Sbjct: 84  YTVAILQSQVGSPFLLNILAGGFVAMLGGIVVGVPSLRVKGLYLAIATIAASFIAHFLFA 143

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                T G  G+ V                        +     +Y++++ +  L     
Sbjct: 144 NL-KFTGGTGGLSVPPA---------------SIFGVLLDTSFRLYWLIVPVTVLMLLGA 187

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L RT I  A+  IRD   +   L   ++  KL +F +SS + G+AG  +A     ++P
Sbjct: 188 ANLLRTRIGRAFIAIRDRDISAEVLGIPLLRYKLLSFGLSSFYAGVAGGLWAYFFRVVTP 247

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F    +I  ++ +I+GGM S+         +  V EL   + F    +  +     + 
Sbjct: 248 ESFPLLMSIFFLAAIIVGGMGSILGGILGAVFMTMVPELLK-LVFDLLPNNTELTVFLSP 306

Query: 319 RHTTLMVIALFLVILMRSHSLL 340
             T +  + +   ++   H L 
Sbjct: 307 VRTIIFGLLIIGFLVFEPHGLA 328


>gi|78043757|ref|YP_361043.1| high affinity branched-chain amino acid ABC transporter permease
           [Carboxydothermus hydrogenoformans Z-2901]
 gi|77995872|gb|ABB14771.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Carboxydothermus hydrogenoformans Z-2901]
          Length = 322

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 69/319 (21%), Positives = 126/319 (39%), Gaps = 41/319 (12%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            A     ++    I I I ++ A  L++VVG  G  S+      A+GAY+  I+   +  
Sbjct: 29  SAGILSPFVMLNLIIIAINIILAVSLNLVVGFTGQFSIGHAGFMALGAYASAIMTLNFNA 88

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              + + V A+++G  G+I+G+P+L+ +GDYLAIATL ++EI + ++     +       
Sbjct: 89  PFIVSLLVGAIVAGIGGIIIGIPTLRLKGDYLAIATLGLAEIIRGVITNIDYLGGA---- 144

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                                      I +   +    G   ++  +I    +++   A 
Sbjct: 145 ----------------------YGLMGITQRTNWLWAFGCMLVTVMVIKNFVQSSHGRAC 182

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
            ++R+++ A   +       K+ AF + S F G+ GA  A     I P+ F F ++  ++
Sbjct: 183 ISVREDEIAAEVMGINTTKYKVIAFTMGSFFAGIGGALLAHYITFIEPNAFNFLKSFDIL 242

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            +V+LGG  SL+    A  +L  +      +                             
Sbjct: 243 VMVVLGGQGSLTGSVVAAIVLTLISTFLQSLAELRLIIYAIILIL--------------- 287

Query: 331 VILMRSHSLLRLRTPSNFL 349
           V+L R   LL     S  L
Sbjct: 288 VMLFRPQGLLGTHELSFKL 306


>gi|254428030|ref|ZP_05041737.1| amino acid or sugar ABC transport system, permease protein
           [Alcanivorax sp. DG881]
 gi|196194199|gb|EDX89158.1| amino acid or sugar ABC transport system, permease protein
           [Alcanivorax sp. DG881]
          Length = 551

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/297 (14%), Positives = 93/297 (31%), Gaps = 21/297 (7%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++      S    + ++   +      +G
Sbjct: 275 AAIGLAITFGVMGVINMAHGELIMLGAYTTYVVQQLLPSSHEWSLLIAVPAAFLVSAFVG 334

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           +   +F   +L    L      + +L  +      +  + V              +    
Sbjct: 335 VLIERFVIRFLYGRPL------ETLLATFGVSLILQQAVRVIFSPLNRTVITPEWMSGAL 388

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
             +          Y++     +  +++  L++T +    R +  N+     L        
Sbjct: 389 EINPVFSLTYNRLYIIFFALAVFLALLTLLKKTRLGLQVRAVSQNRATARGLGIRSERVN 448

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   A   +         S  I    +V+ GG+ +L     A   L
Sbjct: 449 ALTFGLGSGIAGVAGVALAQLTNV--GPNLGQSYIIDSFMVVVFGGVGNLWGTLTAAFSL 506

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +L   M                     ++++ + L I  +   L   R  +  
Sbjct: 507 GIANKLLEPMAGAVLAK-------------IVVLVFIILFIQRKPRGLFPQRGRAAE 550


>gi|134300765|ref|YP_001114261.1| inner-membrane translocator [Desulfotomaculum reducens MI-1]
 gi|134053465|gb|ABO51436.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Desulfotomaculum reducens MI-1]
          Length = 356

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 64/335 (19%), Positives = 118/335 (35%), Gaps = 7/335 (2%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
             K +  L ++    + L+ G      +   +     I+V+    +++V+G  G+ SL  
Sbjct: 5   RMKPVLTLGLILLCSIALYFGQNYLDSFKIRVLNLAAIFVILGVSMNLVLGFTGMFSLGH 64

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +GAY   IL          +I     I      I            +  A     
Sbjct: 65  AGFMCVGAYVSAILTMSPESK--EMIYFMEPIISPLDKIHWPVFPAIIMAGIVAAFFGFL 122

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             F  + ++   +     G               ++           I  I   +V  G 
Sbjct: 123 IGFPALRLRDDYLAIATLGF----GEIIRIIVTNTITITNGSLGLKNIPSIKSLWVYWGF 178

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              +  I+  L  ++   A++ IRDN+ A  ++   I   KL +F+V + F G+AGA   
Sbjct: 179 AIATIWILKRLINSSWGYAFKAIRDNEIAAEAMGIDIFKHKLLSFSVGAFFAGVAGALMG 238

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                + P MF+F     ++ I++LGG+ SL+    A  ++  ++E+   +        L
Sbjct: 239 HLITSVDPTMFRFLFTFQILLIIVLGGLGSLTGSVIAGVVVTIMMEVLRFVEQPMNFLGL 298

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                       +  + L LVIL     L+  R  
Sbjct: 299 AIP-GIPGMRMVIFSLLLLLVILYYRQGLMGTREF 332


>gi|157415273|ref|YP_001482529.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni 81116]
 gi|157386237|gb|ABV52552.1| branched-chain amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747915|gb|ADN91185.1| High affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni M1]
          Length = 349

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 75/355 (21%), Positives = 135/355 (38%), Gaps = 47/355 (13%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L  +   ++F+F+       Y  ++  QI I+++ A   +++ G  G  SL      AIG
Sbjct: 9   LIFLIASIVFIFVSPYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIG 68

Query: 78  AYSYVI--------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           AY+  +                    + + +  S  L + V+ + S    +I+     + 
Sbjct: 69  AYAAALVLLSADAKNDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRV 128

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL    I +   I +  ITNG  G+    +                      
Sbjct: 129 RGDYLAIVTLGFGIIIKIAAINFPSITNGSRGLVDIPQFS-------------------- 168

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                  Y   G+  ++  +IL +  +    A + IRD++ A  ++     + K  AF+ 
Sbjct: 169 -----TIYWTGGIAIVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFST 223

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           S+   G+ G   A     +SP  F F     ++ I++LGG+ S +       ++IG  E 
Sbjct: 224 SAFLEGVGGGLLACLLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEW 283

Query: 298 CCGMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              ++       SL     S       +  I L LV+L     ++     S+ + 
Sbjct: 284 LRFLDELNIKIDSLNLDIQSTPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 338


>gi|91780165|ref|YP_555372.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91692825|gb|ABE36022.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter membrane protein 1,
           HAAT family [Burkholderia xenovorans LB400]
          Length = 607

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 77/324 (23%), Positives = 129/324 (39%), Gaps = 29/324 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++  ++    L       Y+        IY + A  L++V G++G +SL       IGA
Sbjct: 312 VLIAAVVSAFALPLIAPSPYLLQTLTNGWIYGLLALSLTLVAGTVGQISLGHAALLLIGA 371

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y   +L    G S  + IP++  I+   G ++  PS + RG Y++IATL + EI   +++
Sbjct: 372 YGSALLSVNLGWSPAVTIPLAGAITALIGTLLVYPSFRLRGHYVSIATLGIGEIVGLVVL 431

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  +T G  GI     L   G  V S                 +Y+  L +  + A + 
Sbjct: 432 NWDSLTRGPVGITGIPPLALFGWQVTSAR--------------AVYWFALAVLVVLALLQ 477

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L R+ +   WR IR++  A  +        K  AFA      G+ G   A     I+ 
Sbjct: 478 VRLLRSHLGRTWRAIREDDVAARAYGVRPNRYKAIAFACGGFAAGIGGGIAAHLYSYINY 537

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F    +I+ +++VILGG+ S++        LI + EL      Y              
Sbjct: 538 QTFDSQVSILALTMVILGGLGSVAGAVVGAVALISLPELFRFAADY-------------- 583

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
               +  + L L++  R   L   
Sbjct: 584 -RMLIYGVVLLLLVRFRPQGLFGT 606



 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 102/309 (33%), Gaps = 25/309 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  I   IY + A GL+++ G   L++      Y +G +   +  +R GL + + +
Sbjct: 6   DYTINGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGGFIGWLCLTRLGLPLPVAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +       GM++    L+       IA L+ +     +L +   I  G          
Sbjct: 66  LATVAGCALLGMLIERIGLRPLQGAARIAPLLATIGISFVLDQLAQIVFGPDPRP----- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 V S +  + F             +       +A + ++LR T +  A R    +
Sbjct: 121 ------VPSTLPEWSFTIGGATLGSLDLLIAATGIGAAAVLYVFLRFTRLGWAVRATAQD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +     + FA++    G++G       + I P M  F   +  +  +++G
Sbjct: 175 RDAALQMGVNVHAVNRAVFAIACGLGGLSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++      + +L  V      +    +  L  F                      R 
Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFVLLLLFLV-------------WRP 280

Query: 337 HSLLRLRTP 345
           + L      
Sbjct: 281 NGLFSANRR 289


>gi|225548146|ref|ZP_03769431.1| hypothetical protein RUMHYD_00125 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040677|gb|EEG50923.1| hypothetical protein RUMHYD_00125 [Blautia hydrogenotrophica DSM
           10507]
          Length = 342

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 54/338 (15%), Positives = 118/338 (34%), Gaps = 28/338 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R+  + K   L+ +   LL+ +         Y+  + +   + ++    L++V G  GL 
Sbjct: 3   RVKGWMKREYLIFIGLYLLVLILNYTGVINNYLLQVIMLAGVNIIVTLSLNLVNGVTGLF 62

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S+      A+GAY   ++ +              ++S          +       L    
Sbjct: 63  SIGHAGFMAVGAYVAAVIST-------------TLMSALEISSKDFLANGILLLALIGGG 109

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L+ +     I      +      I        + + +R +           I +I  +  
Sbjct: 110 LVAAGGGFLIARPTLKVKGDYLAIVTLGFGEIIRSVIRLIDYVGGARGMIGIPKITNFTW 169

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  L+        ++    +   IR+N+ A  ++ T     K  AF  S+ + G+ G
Sbjct: 170 VFLVVLLAVYSSRNFIKSTYGRSCLAIRENEIAAEAMGTDARKYKTIAFTFSAFWAGIGG 229

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             FA     ISPD F +S++  ++  +  GG+ +++  A    ++  + EL   ++    
Sbjct: 230 GLFAHLLMFISPDTFAYSKSTDLLVYLYAGGVGTITGAAAGAFLMTLLPELLRFLDD--- 286

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                           +  + L  VI+ R + +   R 
Sbjct: 287 ------------WRLVIYALVLLYVIIWRPYGISGGRE 312


>gi|323498861|ref|ZP_08103844.1| urea ABC transporter, permease protein UrtB [Vibrio sinaloensis DSM
           21326]
 gi|323315973|gb|EGA69001.1| urea ABC transporter, permease protein UrtB [Vibrio sinaloensis DSM
           21326]
          Length = 541

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 99/306 (32%), Gaps = 21/306 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+   GL+I  G +G++++       +GAY+  ++         + + +S  +
Sbjct: 256 LSLGSVLVLAGIGLAITFGVMGVINMAHGELIMLGAYTTYVMQQLLPAHTGVALILSIPM 315

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++G+   +    +L    L      + +L  +      +  +           +
Sbjct: 316 AFLVSGLVGILIERSVIRHLYGRPL------ETLLATFGISLILQQAVRSIFSPLNRSVS 369

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +      +  +       Y++L    +  ++++ L++T +    R +  N+    +
Sbjct: 370 TPDWMAGALEINPMLSLTYNRLYIILFCAMVFMALVMILKKTPLGLQVRAVSQNRPMARA 429

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           F + +   G+AG   +   +         +  I    +V+ GG+ +L 
Sbjct: 430 MGIRSERVDAMTFGLGAGVAGVAGVALSQLTNV--GPNMGQAYIIDSFMVVVFGGVGNLW 487

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L    ++                         L+++ + L I  R   L   
Sbjct: 488 GTLVAGLGLGLFNKILEPWAGAVLAK-------------ILVLVFIILFIQKRPRGLFPQ 534

Query: 343 RTPSNF 348
           R  +  
Sbjct: 535 RGRAAE 540


>gi|297530318|ref|YP_003671593.1| inner-membrane translocator [Geobacillus sp. C56-T3]
 gi|297253570|gb|ADI27016.1| inner-membrane translocator [Geobacillus sp. C56-T3]
          Length = 328

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 56/324 (17%), Positives = 132/324 (40%), Gaps = 29/324 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +    +L L         +  ++  +ILI  +FA  L+++V   GL+SL     + IG
Sbjct: 5   MFISAAAILLLAAAPFLFSLFYLNLLAEILILAIFALSLNVLVAYTGLVSLGHAAFFGIG 64

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  +L   +     + +  S +I+     I+GL  ++  G Y  + TL  S++  + +
Sbjct: 65  AYASALLSKEWSPQFLVTMLASFLIAAIAAAIIGLFCVRVNGFYFLMLTLAFSQMIYSFV 124

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +   +T G  G+       F    +                 +F+YYV+L +  +   +
Sbjct: 125 HQSTTLTGGSNGLSGLPSPVFGTLDLSH--------------PVFLYYVILFVFIVMYIV 170

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  + ++   +    IR+N+    ++       K +AF ++ A  G++GA ++     +S
Sbjct: 171 LSLMVKSPFGHVLIGIRENEMRMKAIGYNTTLYKYAAFIIAGAIGGVSGALYSTFNGFVS 230

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+   ++ +  V+ +V++GG  ++       A ++ +  +                    
Sbjct: 231 PNDVYWTMSGSVLIMVLIGGAGTMIGPVLGAAFIVVLETIVSSY---------------T 275

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
              T ++ +   L ++     ++ 
Sbjct: 276 TMWTLIIGVIFILFVVFIPQGIVG 299


>gi|83747811|ref|ZP_00944845.1| LivG [Ralstonia solanacearum UW551]
 gi|83725583|gb|EAP72727.1| LivG [Ralstonia solanacearum UW551]
          Length = 608

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 113/299 (37%), Gaps = 15/299 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L  V  +++   L    + ++  ++   I +Y + A GL ++ G  GL S        +G
Sbjct: 22  LLTVAFVIVLALLPVLPTPEFWITLLNYIGLYSLVALGLVLLTGVGGLTSFGQAAFVGLG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYS   L ++YGLS W+ +     I+ A   ++GL +++  G YL +AT+        + 
Sbjct: 82  AYSTAYLTTQYGLSPWIGLLAGLAITMASAYVIGLITMRMSGHYLPLATIAWGLSLFFLF 141

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
              + +                     + I         +     M+Y++  +  ++   
Sbjct: 142 GNLEFL---------------GKYDGLNGIPVLNLLGKPLQSGREMFYLIWAVVVVAVLA 186

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  +    A R ++       ++     + K+  F  ++    ++G  +A  +  ++
Sbjct: 187 VQNLLNSRPGRAIRALKGGGTMAEAMGVNTAWMKVVIFVAAAILACISGFLYAHLQRAVN 246

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P  F  +  I  + + ++GG+  +        +L  + +    +      S   F+   
Sbjct: 247 PTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGLLTILKDSLQSLLPKLLGSTGNFEIIV 305


>gi|46201433|ref|ZP_00208100.1| COG4177: ABC-type branched-chain amino acid transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 363

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 58/320 (18%), Positives = 117/320 (36%), Gaps = 26/320 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
             ++  L  +    ++      I+I  + A  L ++VG  GL+SL     + +G Y   I
Sbjct: 19  FPVWGPLAFSAKYAFLLQKLTGIMILAILAMSLDLLVGVAGLVSLGHAAFFGLGGYMLAI 78

Query: 84  LGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           L  +Y   ++W+ +P +  +  A   ++G  +++  G Y  + TL   ++          
Sbjct: 79  LSPQYEAANVWVALPATMAVVAAASAVVGFLAIRTAGIYFIMVTLAFGQMGYYFF-NDSK 137

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +  G  G Y+  +           +  F      +  +   ++ +LG      +++  + 
Sbjct: 138 LAGGSDGAYIYVKPS---------VEAFGLTLINLENKQAFFFTVLGALVAVYALLRVVL 188

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            +        I  N+     L       KL AF ++ A  G+AG   A     +SP M  
Sbjct: 189 ASPFGRVLAAIGVNEGRVRGLGFNPTAYKLVAFTIAGALAGLAGFLAATQYGFVSPAMLG 248

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + ++  V+ +VILGGM +L        IL         +  ++                 
Sbjct: 249 WHQSGHVLVMVILGGMGTLFGPVLGAFILELAHFGLEAVTEHW---------------LL 293

Query: 323 LMVIALFLVILMRSHSLLRL 342
            M   +  ++L     +  L
Sbjct: 294 PMGALVIAIVLALPKGVAGL 313


>gi|170745143|ref|YP_001766600.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
 gi|170658744|gb|ACB27798.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
          Length = 342

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 58/320 (18%), Positives = 112/320 (35%), Gaps = 25/320 (7%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
             L   FL          ++ + IL+  ++A G +++ G  GLLS         GAY   
Sbjct: 38  VALTLAFLVVFPWIAPYQALAVNILVLGLYALGFNLLFGYTGLLSFGHAAFLGGGAYGCG 97

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           I   RYGL   L +    +++      MG+ +++ RG Y A+ TL +S        + + 
Sbjct: 98  IAIVRYGLHPVLGLAAGTLLATGIAAAMGVLAIRTRGIYFAMTTLALSMCVYYAFYQAEA 157

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
            T G+ G+   +                      ++  +  YY  L +  ++  +   L 
Sbjct: 158 FTGGENGLRGINVPALALPGFS----------LNLLDPVVKYYAALAVVGVAVWLFSRLL 207

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            +    A   IR+N+    +    +   KL AF +S A  G+AG   A     +  +   
Sbjct: 208 SSPFGAALEAIRENEGRAQACGYDVRRMKLVAFVISGALCGLAGGLQAIHLSIVPIETMH 267

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           +S +   + + +LGGM +        A    + +    +  ++                 
Sbjct: 268 YSTSGQAVMMALLGGMGTFFGPFVGAATYALLQDGLATVTSHW---------------QL 312

Query: 323 LMVIALFLVILMRSHSLLRL 342
            +       +L     +   
Sbjct: 313 FVGAIFIAFVLFLPLGIWGE 332


>gi|23466261|ref|NP_696864.1| permease of ABC transporter for branched-chain amino acids
           [Bifidobacterium longum NCC2705]
 gi|23327009|gb|AAN25500.1| permease of ABC transporter for branched-chain amino acids
           [Bifidobacterium longum NCC2705]
          Length = 358

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 70/341 (20%), Positives = 129/341 (37%), Gaps = 42/341 (12%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +    ++     +  +  YI  + +   I ++    L++ +G LG L+L C    A
Sbjct: 12  FIGILAAFGIVMALCESGLADSYIKGIMMTACIAIIMTTSLNLTIGVLGQLTLGCCGFEA 71

Query: 76  IGAYSYVILGSR---------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           IGAY   +                   L   +  +++   G+++G+P+L+  GDYLAI T
Sbjct: 72  IGAYVAALTSKYMVAAGIAIDPTARFLLTTLIGGVVACVFGILIGIPALRLHGDYLAIIT 131

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + I+   K                        L +     +   I      YV
Sbjct: 132 LGFGEIIRVIIQNLKVAGG------------------MGLDKGAAGQALIGIERTANLYV 173

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  ++  ++    R+    A + IRD++ A  +      + K+  FA+S+ F G+AG
Sbjct: 174 VFWIMVVTVVVLFMFGRSRYGRAVKAIRDDEIAAGASGLNTTYLKVLVFAISAFFAGIAG 233

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             FA     ++P M  +  +I  + +V+ GGM SL+    +   L  + EL      Y  
Sbjct: 234 GIFAQYIGSLNPTMAGWLNSINYVIMVVFGGMGSLTGSIVSAIGLTILPELLRAFADY-- 291

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                              + L LV++ R   +      S 
Sbjct: 292 -------------RMLAYSVVLVLVMIFRPQGIFGSWEFSL 319


>gi|163850715|ref|YP_001638758.1| inner-membrane translocator [Methylobacterium extorquens PA1]
 gi|218529437|ref|YP_002420253.1| inner-membrane translocator [Methylobacterium chloromethanicum CM4]
 gi|254560340|ref|YP_003067435.1| ABC transporter permease [Methylobacterium extorquens DM4]
 gi|163662320|gb|ABY29687.1| inner-membrane translocator [Methylobacterium extorquens PA1]
 gi|218521740|gb|ACK82325.1| inner-membrane translocator [Methylobacterium chloromethanicum CM4]
 gi|254267618|emb|CAX23464.1| ABC transporter, permease [Methylobacterium extorquens DM4]
          Length = 337

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 114/302 (37%), Gaps = 25/302 (8%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++ + +LIY ++A G +++ G  GLLS      +  GAY   I    +GL   L + ++ 
Sbjct: 49  ALAVNVLIYGLYAVGYNLLYGYTGLLSFGHAAFFGTGAYLTGIGIGAFGLHPLLAMALAV 108

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           + +    +++G  S++ RG Y A+ TL ++++   + ++    T G+ G           
Sbjct: 109 VAASGLALVIGTVSIRSRGIYFAMVTLALAQLVYYVALQASSWTGGENG----------L 158

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                        S  ++  +  Y  +L     + ++I  +  +        IR+N+   
Sbjct: 159 RGFTVSAIDLGIVSLDILNPLTKYLFVLAFVGAALALISRILASPFGAVIEAIRENETRA 218

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +    +   KL AF +S  F G+AGA  A     +  D   +  +   + + ++GG  +
Sbjct: 219 RACGFDVERTKLLAFVLSGLFCGLAGALSAIHLSIVPLDSLAYHTSGTAVVMTLVGGAGT 278

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                     ++ + ++      ++                  +     L +L     L 
Sbjct: 279 FFGPFVGALTVLVLEDVLSLWTPHW---------------QLALGSVFILFVLFLPRGLW 323

Query: 341 RL 342
             
Sbjct: 324 GT 325


>gi|171741642|ref|ZP_02917449.1| hypothetical protein BIFDEN_00728 [Bifidobacterium dentium ATCC
           27678]
 gi|171277256|gb|EDT44917.1| hypothetical protein BIFDEN_00728 [Bifidobacterium dentium ATCC
           27678]
          Length = 443

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 97/305 (31%), Gaps = 28/305 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I  L+  + + G+++V G+ GL S +      +G     +      + +      + +I
Sbjct: 163 IIFGLMLGLMSVGMNLVYGTTGLQSFSHGEQVTLGGLMAYVGTQMLHMPVVASAIFAIVI 222

Query: 103 SGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
               G+I          R     +  +I++      L        G     +        
Sbjct: 223 GAITGLIQNEIVWGPLRRRHVGTMQQMIVTIGLSMALQYTFQFFFGGDIKGIV------- 275

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                      F    +  ++      L    +   + L+L +T +  A R + DN    
Sbjct: 276 -----KSVPDSFQLGPITTDMPTLLSALIAICVIIGVTLFLYKTRLGRATRAVSDNAALA 330

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +    +       + +S +   ++G       + IS +    +  +++ + V LGG+ +
Sbjct: 331 AASGINVDQVVRVVWILSCSMAALSGVLLGIYLNGISWNT-GATLILLMFAAVTLGGLGT 389

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
            +     + ++  V ++   +               N       +  L +V+L+R   + 
Sbjct: 390 ANGALIGSLVIGIVADMSSLVIP-------------NDMRYASALAILIIVLLVRPQGIF 436

Query: 341 RLRTP 345
             +  
Sbjct: 437 GKQQR 441


>gi|86747820|ref|YP_484316.1| inner-membrane translocator, ABC transporter related
           [Rhodopseudomonas palustris HaA2]
 gi|86570848|gb|ABD05405.1| inner-membrane translocator, ABC transporter related
           [Rhodopseudomonas palustris HaA2]
          Length = 583

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/321 (14%), Positives = 113/321 (35%), Gaps = 23/321 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +   ++  L +          +    + +  +   GL ++ G +GL S          AY
Sbjct: 4   LSIAVIGLLCIVPIAFPTSYLTPLNYVGLNAIICVGLVLLAGVVGLASFGQAAFVGTSAY 63

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  +L ++ G S W  +P + +++    + +   +++  G YL + TL        +   
Sbjct: 64  TAALLSTKLGWSAWETLPAALLVTATSALGLSWLTIRLSGHYLVLGTLAWGTALYYLFGN 123

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +  G  GI     +   G +                    +Y+++     ++  +  
Sbjct: 124 VAFL-GGYNGISGIHPVTLFGISFGDTR--------------AVYWLIWACVAIAMMLTA 168

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  +    A R +R    A  S    +   K  AF +++ F G+ G   A     ++P 
Sbjct: 169 NLLDSRTGRALRVVRHTIMAA-SFGIDVSKLKTKAFVLAAVFAGVTGWLTAHYLGVVNPG 227

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F  + +I  + +V++GG + L+      A++  +                 F+ S    
Sbjct: 228 PFNANSSIDYMFMVVVGGSSHLAGALVGPAVVEFLRNWLRETLPNLIGGSSSFELS---- 283

Query: 320 HTTLMVIALFLVILMRSHSLL 340
              +  + + L++      ++
Sbjct: 284 ---VFGLMMVLLLQGAGGGIM 301


>gi|284992220|ref|YP_003410774.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160]
 gi|284065465|gb|ADB76403.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160]
          Length = 415

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 73/341 (21%), Positives = 138/341 (40%), Gaps = 15/341 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++  LL FL +      ++    G  +    + A GL+++VG+ G LSL      A+GA
Sbjct: 35  VLIAALLGFLLVFPLYFDEFWLRTGFAVFGAAIGAIGLNLLVGTTGQLSLAHAFFLAVGA 94

Query: 79  YSYVILGSR------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            SY  +                GL   + + V  +++G  G++    + + RG YL +A+
Sbjct: 95  VSYSYISGESGGLGTRAGIEGLGLPPVVGMVVGVLLAGLAGLVFSPIAARLRGIYLGVAS 154

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L +  I  +++  W P+T G  G   A      G T  +                 ++Y+
Sbjct: 155 LGLVFIGVHVINTWTPVTGGFNG-RAAPEFSLFGFTFGNSDPQLWVLGVPFREAERLWYL 213

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            L +   +      L R+    A +T+RD++ A   +   +   K   F VSS + G++G
Sbjct: 214 GLVLALAAYVFARNLLRSRPGRALQTLRDSEVAASVMGVNVQAYKARVFLVSSMYAGLSG 273

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--Y 304
             +A S   I+P+ F    +I  +++++LGG+ S+   A     +  +  L         
Sbjct: 274 VLYALSIGSIAPESFTLVVSIQYLAMIVLGGLGSVGGAALGALFVTALPLLFQQYADVLP 333

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
             ++  +   S       L   A+ L++L     L  +   
Sbjct: 334 LVSAPGQGGISAGFAARFLYGAAIILIVLFEPAGLAGIAQR 374


>gi|207724434|ref|YP_002254831.1| amino-acid composite atp-binding transmembrane protein [Ralstonia
           solanacearum MolK2]
 gi|206589655|emb|CAQ36616.1| amino-acid composite atp-binding transmembrane protein [Ralstonia
           solanacearum MolK2]
          Length = 608

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 114/299 (38%), Gaps = 15/299 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L  V  +++   L    + ++  ++   I +Y + A GL ++ G  GL S        +G
Sbjct: 22  LLTVAFVIVLALLPVLPTPEFWITLLNYIGLYSLVALGLVLLTGVGGLTSFGQAAFVGLG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYS   + ++YGLS W+ +     I+ A   ++GL +++  G YL +AT+        + 
Sbjct: 82  AYSTAYVTTQYGLSPWIGLLAGLAITMASAYVIGLITMRMSGHYLPLATIAWGLSLFFLF 141

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
              + +                     + I         +     M+Y++  +  ++   
Sbjct: 142 GNLEFL---------------GKYDGLNGIPVLNLLGKPLQSGREMFYLIWAVVVVAVLA 186

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  +    A R ++       ++     + K+  F V++    ++G  +A  +  ++
Sbjct: 187 VQNLLNSRPGRAIRALKGGGTMAEAMGVNTAWMKVVIFVVAAILACISGFLYAHLQRAVN 246

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P  F  +  I  + + ++GG+  +        +L  + +    +      S   F+   
Sbjct: 247 PTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGLLTILKDSLQSLLPKLLGSTGNFEIIV 305


>gi|315932145|gb|EFV11088.1| branched-chain amino acid transport system / permease component
           family protein [Campylobacter jejuni subsp. jejuni 327]
          Length = 349

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 75/355 (21%), Positives = 135/355 (38%), Gaps = 47/355 (13%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L  +   ++F+F+       Y  ++  QI I+++ A   +++ G  G  SL      AIG
Sbjct: 9   LIFLIASIVFIFVSPYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIG 68

Query: 78  AYSYVI--------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           AY+  +                    + + +  S  L + V+ + S    +I+     + 
Sbjct: 69  AYAAALVLLSADAKNDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRV 128

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL    I +   I +  ITNG  G+    +                      
Sbjct: 129 RGDYLAIVTLGFGIIIKIAAINFPSITNGSRGLVDIPQFS-------------------- 168

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                  Y   G+  ++  +IL +  +    A + IRD++ A  ++     + K  AF+ 
Sbjct: 169 -----TIYWTGGIAIVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFST 223

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           S+   G+ G   A     +SP  F F     ++ I++LGG+ S +       ++IG  E 
Sbjct: 224 SAFLEGVGGGLLACLLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEW 283

Query: 298 CCGMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              ++       SL     S       +  I L LV+L     ++     S+ + 
Sbjct: 284 LRFLDELNIKIDSLNLDIQSTPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 338


>gi|192292915|ref|YP_001993520.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|192286664|gb|ACF03045.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 314

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 67/325 (20%), Positives = 136/325 (41%), Gaps = 30/325 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + ++   ++   L       Y   +   + +  + A GL+I++G  G +SL     + IG
Sbjct: 10  VILIALAVVMAVLPLLFPSSYYFRVASLVWVSALAAIGLNILMGKAGQVSLGHAGFFGIG 69

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  I  +  GL+  L + V A++S     ++G P L+ +G YLAIATL +  +   ++
Sbjct: 70  AYAVAIGPAHLGLNALLAVLVGALLSALLAFLVGRPILRLKGHYLAIATLGLGVLVAMVI 129

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                 T G  G+ V     F      S                  Y++  G+  +    
Sbjct: 130 TTESGWTGGPDGMPVPKLSLFGWRISGSNTW---------------YWITAGLLLIGTWF 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L L  T    A+R + D++ A  +    +   KL AF +++ +  +AG+  A     ++
Sbjct: 175 ALNLDDTPTGRAFRALHDSEIAARTAGVHVERFKLQAFVIAAVYASIAGSALAMMNGFVN 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           PD   F  ++ ++++V+LGG+ S+       A+L+ + +L      Y             
Sbjct: 235 PDQAGFLHSVELVTMVVLGGLGSIVGSIVGAAVLVVLPQLLTVFQDY------------- 281

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                L+ + + + ++     ++ +
Sbjct: 282 --EHFLLSLIIIVSMIFMRDGMVPM 304


>gi|13475974|ref|NP_107544.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14026734|dbj|BAB53330.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 327

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 68/323 (21%), Positives = 134/323 (41%), Gaps = 23/323 (7%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------YG 89
           Y        LI+ +   GL++  G  GL ++      AIGAY+  +L +         +G
Sbjct: 7   YGAFFLTTALIFSLVTLGLNLQWGLTGLFNVGLAGFVAIGAYTSALLTTPDDAARLGGFG 66

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L I +    + ++ G    + G+ +L+ R DYLAI T  ++ + Q + +  + +T G  G
Sbjct: 67  LPILVGWLGAMVVGGIAAALTGMATLRLRSDYLAITTFGVAVVVQLVALNAQKLTGGPFG 126

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           I    R             F     + +++ +    V+  +  ++   +  L R+     
Sbjct: 127 IGFIPRP------------FGSLAETPLLFNLSNLAVVCAVTLIAYLALEHLSRSPWGRV 174

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            + +R++++A  SL  +  F ++ AFAV  A + +AGA  A     I+PD +       V
Sbjct: 175 LKALREDERAAISLGKSARFYRVQAFAVGGAIMALAGALQAHFTGFIAPDNYLPILTFQV 234

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             ++I+GG  S       + ++ G+      +    F    +            + + L 
Sbjct: 235 WVMLIVGGSGSNFGAVIGSILVWGIWAGSGTLTSVLFAPEQQ--ARAASLQIVAIGVMLC 292

Query: 330 LVILMRSHSLLRLR-TPSNFLER 351
           +++L+R + L   R     F +R
Sbjct: 293 VILLIRPNGLFGDRPRRPRFGKR 315


>gi|171911822|ref|ZP_02927292.1| inner-membrane translocator [Verrucomicrobium spinosum DSM 4136]
          Length = 584

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/334 (11%), Positives = 109/334 (32%), Gaps = 53/334 (15%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG----------------- 85
                I ++ A GL+I  G +G++++       +GAY+  ++                  
Sbjct: 275 LSTGSILLVVAIGLAITFGLMGVINMAHGELLVVGAYTTYVVQCIFGAGLTLAPFSQSSL 334

Query: 86  -----------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
                      + + +   + +P S +++   G+ +    ++F       + L+ +    
Sbjct: 335 TFTIPGMHATGATFSVYFLVALPCSFLMAALVGIGLERGIIRFLYKRPLES-LLATWGVS 393

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++ +   +  G   + +    +  G+ V + I F       + + + +  +   +    
Sbjct: 394 IVMQQLLRLIFGPQNVALESPAWLSGSWVVNDIAFNWNRLFVIGFAVIIIVLTWAVL--- 450

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                   +T +    R++  N+     +        +  F   S   G+AGAF +   +
Sbjct: 451 -------NKTPLGLLIRSVMQNRDMAACMGVRTERVNMLTFGFGSGLAGLAGAFISQIDN 503

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                   +   +     V++GG+ ++     +   +  V +    +             
Sbjct: 504 VGPYTGQNYI--VDSFMTVVVGGVGNMIGTVISALGIGVVDQSLQQI------------L 549

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
              +    L++  + L +  R   +   R+ S  
Sbjct: 550 GNPVLGKILVLGTIILFLQWRPQGIFVTRSRSLE 583


>gi|91779097|ref|YP_554305.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91691757|gb|ABE34955.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 328

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 77/308 (25%), Positives = 129/308 (41%), Gaps = 31/308 (10%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y+  +   I++Y + A  L+IV+G LG L+      + IGAY+  +     GL   
Sbjct: 32  FVNDYVQFIVNTIVVYCIVAVALNIVLGYLGQLAFANAAFFGIGAYTAGLSMVHLGLPFV 91

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + +P++ +  G  G+++GLP+L+ RG YLAI TL   E+ + + I  + +T G  G  V 
Sbjct: 92  VAVPLAGIAGGLAGLLVGLPALRVRGYYLAIVTLAFVELMRWVWIHAEKVTFGSGGFDVP 151

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                                   +     YYV L +          L R+    A+  +
Sbjct: 152 P----------------ISLFGMTLGGRGKYYVFLFVTVAVLWTTSLLLRSRYGRAFVAV 195

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           RDN+ A  SL   +   K+ AFA S    G+AGA FA    R+SPD F  S+ ++  +IV
Sbjct: 196 RDNEAAAASLGIEVNRTKIIAFAWSGLVAGLAGALFAELNGRLSPDSFDISQMLMEFTIV 255

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ++GG  SL+       I+  +  +   +                  +     + L  V+ 
Sbjct: 256 MIGGPGSLAGSVIGAIIITALPNVLSNL---------------PGLNEVAFSVLLIAVLF 300

Query: 334 MRSHSLLR 341
           +    +  
Sbjct: 301 LIPKGIGG 308


>gi|227823939|ref|YP_002827912.1| putative branched-chain amino acid transport system / permease
           component [Sinorhizobium fredii NGR234]
 gi|227342941|gb|ACP27159.1| putative branched-chain amino acid transport system / permease
           component [Sinorhizobium fredii NGR234]
          Length = 328

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 70/322 (21%), Positives = 129/322 (40%), Gaps = 25/322 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +   L++          +Y+    I  LI+++ A GL+++VG  GLLSL     + IGAY
Sbjct: 19  LAAILVVVALAAPFIGSRYVTHSLIIALIFMLPAHGLNLLVGYTGLLSLAQAAFFGIGAY 78

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  +L   YG   ++    + +++GAC + +G+P+L+ R     + TL    I Q I   
Sbjct: 79  AAGLLAVHYGTPFYVNAAAAGLLAGACALPLGIPALRLRATSFVMCTLGFVIIGQAIAKN 138

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W  +T G  G+    +                  S  V      YY+ L +  L+   + 
Sbjct: 139 WISVTRGDMGLSAIPKP----------HFALGPLSFTVSGTTSFYYMALAIGALATLAVW 188

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            + R+        IR+N+    SL       KL  F +S+AF G+ G+ +A     +SP 
Sbjct: 189 MIVRSPAGRNMIAIRENETLAESLGVPTWRYKLLVFIISAAFAGVGGSLYAHYLTVVSPL 248

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F+   +  ++ IV+ GG  ++S +   + + +G+ E                       
Sbjct: 249 TFQMYYSTTMLIIVLGGGAGTISGVVFGSLLFVGLTEALR---------------ITPEL 293

Query: 320 HTTLMVIALFLVILMRSHSLLR 341
                 + L +++         
Sbjct: 294 RMIAYGLCLLVLVFWFKKGFAP 315


>gi|254473749|ref|ZP_05087144.1| permease protein, haat family [Pseudovibrio sp. JE062]
 gi|211957135|gb|EEA92340.1| permease protein, haat family [Pseudovibrio sp. JE062]
          Length = 326

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 69/315 (21%), Positives = 127/315 (40%), Gaps = 26/315 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------Y 88
            Y   M I I IY + A GL+I  G  GL +      +A+GAY+  +L +         +
Sbjct: 8   NYAVFMAIFIGIYSLLALGLNIQWGFSGLFNAGIAGFFAVGAYTSALLTAPESSVHLGGF 67

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            L + +    + + +GA    +G   L+FR DYLAIAT+ ++EI + ++     +T G  
Sbjct: 68  QLPVVIGWIGAMIAAGAIAWPIGKVCLRFRSDYLAIATIGVAEIIRLVVKSEGWMTGGAR 127

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G+    R +                 S++  ++    ++L +  +    I          
Sbjct: 128 GVNKIPRPF--------------GDLSYLYSQLAYLALVLAIVAVVYWAIERQISAPWGR 173

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK-FSENI 267
             R IRDN+ A  ++   I   +L AF   +A +G+ GA FA     I+P+         
Sbjct: 174 MMRGIRDNEDAATAMGKDIKARRLEAFIFGAAVMGLGGALFAHFNRSITPEAIDPMIATF 233

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           ++  ++ILGG  +        A++  +      +         ++          ++ + 
Sbjct: 234 LIWIMLILGGSGNNRGALLGVAVVWIIWSASEFVTD---QLPTEYAIKAKYMRVFIIGLL 290

Query: 328 LFLVILMRSHSLLRL 342
           L LV+  R   +L  
Sbjct: 291 LQLVLRFRPEGILPE 305


>gi|57242112|ref|ZP_00370052.1| branched chain amino acid ABC transporter, permease protein
           [Campylobacter upsaliensis RM3195]
 gi|57017304|gb|EAL54085.1| branched chain amino acid ABC transporter, permease protein
           [Campylobacter upsaliensis RM3195]
          Length = 350

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 58/335 (17%), Positives = 118/335 (35%), Gaps = 7/335 (2%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L  ++  L F+F+       Y  S+  QI I+++ A   +++ G  G  SL      A+G
Sbjct: 10  LIFLFLALAFIFISPKIFSDYGMSIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAVG 69

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   ++                +      +      +      L    L     F    
Sbjct: 70  AYVAALVLLSAEAKEEQFFYDG-INPFILALHFPSFIVALLAAGLCACLLSFILSFAVFR 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++   +     G  +  +L  L     +            I      Y   G+  ++  +
Sbjct: 129 VRGDYLAIVTLGFGIIIKLLALSFPTFTN----GSRGINEIPAYSNIYWTGGIAIIAVML 184

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           IL +  +    A + IRD++ A  ++     + K  AF  S+   G+ G   A     +S
Sbjct: 185 ILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFGTSAFLEGVGGGLLACLLTTVS 244

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL--KFDCS 315
           P+ F F     ++ I++LGG+ S +     + ++IG  E    ++ +     L      +
Sbjct: 245 PEQFDFLLTFQLLIIIVLGGLGSTTGAILGSILVIGGAEWLRFLDEFKIQMDLFGAEIQT 304

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            +     +  + L LV+L     ++  +      +
Sbjct: 305 GHGLRMVVFSLILILVMLFARRGIMGDKELVEIFK 339


>gi|76803454|ref|YP_327723.1| branched-chain/neutral amino acids ABC transporter permease
           [Natronomonas pharaonis DSM 2160]
 gi|76559269|emb|CAI50877.1| ABC-type transport system permease protein II (probable substrates
           branched-chain/neutral amino acids) 2 [Natronomonas
           pharaonis DSM 2160]
          Length = 353

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 57/327 (17%), Positives = 127/327 (38%), Gaps = 26/327 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +  +  +     +       +   + + +L+++  A   +++ G  G L       + IG
Sbjct: 27  IVWIPIVAFLFVVPWIGVGNFELRILVGVLMWIGLAQSWNMIGGYAGYLDFGHGAYFGIG 86

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A++  I  S Y L     + ++ ++       +G+P+L+ +G Y AIAT   +E  + + 
Sbjct: 87  AFATGIAMSVYALPFLPALVLAGVVGAVFAYFIGVPTLRLKGAYFAIATWAFAEAMRQLA 146

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +    IT G +G            T+ S +  F  P   +   I++YYV+ G+C     +
Sbjct: 147 L-LLDITGGTSG-----------LTLPSTMDAFGIPLPDIPRIIYIYYVMFGLCVGIMLL 194

Query: 198 IL-WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
                 R       + +RDN+ A  SL       K   + +S A   + G  +A     +
Sbjct: 195 TYVLFERHEFGYKVKAVRDNEDAAESLGIDSTRIKRQVYVLSCATAALLGGAYAFYITFV 254

Query: 257 S-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
              ++        ++ + ++GG+ ++        ++  +  L                  
Sbjct: 255 HPQEVLDSMITAQMVIMALVGGIGTVLGPVVGGTLIFLLDRLSALF------------FG 302

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
            +  + +LM + + +VIL   + ++ L
Sbjct: 303 SDTLYISLMGLLIMIVILFAPNGIVGL 329


>gi|300693614|ref|YP_003749587.1| ABC transporter, permease protein (n-ter) and ATP-binding protein
           (c-ter) [Ralstonia solanacearum PSI07]
 gi|299075651|emb|CBJ34948.1| ABC transporter, permease protein (N-ter) and ATP-binding protein
           (C-ter) [Ralstonia solanacearum PSI07]
          Length = 608

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/299 (16%), Positives = 111/299 (37%), Gaps = 15/299 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L     +++   L    + ++  ++   I +Y + A GL ++ G  GL S        +G
Sbjct: 22  LLTAAFVIVLALLPVLPTPEFWITLLNYIGLYSLVALGLVLLTGVGGLTSFGQAAFVGLG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYS   L ++YGLS WL +     I+     ++GL +++  G YL +AT+        + 
Sbjct: 82  AYSTAYLTTQYGLSPWLGLLAGLAITMVSAYVIGLITMRMSGHYLPLATIAWGLSLFFLF 141

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
              + +                     + I         +     M+Y++  +  ++   
Sbjct: 142 GNLEFL---------------GKYDGLNGIPVLNLLGKPLQTGREMFYLIWAVVVVAVLA 186

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  +    A R ++       ++     + K+  F  ++    ++G  +A  +  ++
Sbjct: 187 VQNLLNSRPGRAIRALKGGGTMAEAMGVNTAWMKVVIFVAAAILACISGFLYAHLQRAVN 246

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P  F  +  I  + + ++GG+  +        +L  + +    +      S   F+   
Sbjct: 247 PTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGLLTILKDSLQSLLPKLLGSTGNFEIIV 305


>gi|323529385|ref|YP_004231537.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
 gi|323386387|gb|ADX58477.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
          Length = 356

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 58/327 (17%), Positives = 122/327 (37%), Gaps = 27/327 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++  LL+   L AT       S+  ++L++ + A G ++++G  GLLS    I + +G+
Sbjct: 30  FLLLALLVVCILPATLRSG---SLATEVLVFALAALGCNLLLGHTGLLSFGQGIFFGLGS 86

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           YS  ++ ++  L + + +  +  +       +G  S++ RG Y  + TL   ++F  +  
Sbjct: 87  YSAGLVLTKAALPVPVALLAAIAVGAVAAAFVGWFSIRQRGTYFVMLTLAFGQLFYFLAY 146

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +T G  G+    R           +  F      +      Y  +  +  +   ++
Sbjct: 147 TTPDLTGGDNGLLDIPRPA---------LGLFGKELIVLTSPWQYYGFVAVLFLVVFWLL 197

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + +  +        IRDN+    ++   +   KL AF +S    G+AGA  A        
Sbjct: 198 MRVSHSVFGRTLLAIRDNEARAAAVGYDVKRFKLMAFVISGGVTGLAGALHALMTGIAPL 257

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
               +  + +++ + ++GG  +L       A  +   +    +   +             
Sbjct: 258 SNIDYHTSEMILVMTVIGGTGNLFASVLGAAFYVLFADWLSTLWPRW------------- 304

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345
               L+ I L  V L     L  L   
Sbjct: 305 --LLLLGIVLMAVSLYMQRGLWGLGER 329


>gi|224371920|ref|YP_002606086.1| LivM5 [Desulfobacterium autotrophicum HRM2]
 gi|223694639|gb|ACN17922.1| LivM5 [Desulfobacterium autotrophicum HRM2]
          Length = 290

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 68/309 (22%), Positives = 123/309 (39%), Gaps = 20/309 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+  + I I+IY +FA  L++ +G  GL +   +  +AIGAY+  +L         L +
Sbjct: 2   DYLYHILILIMIYSIFAISLNLELGFAGLYNFGHIAFFAIGAYTSALLSLGGMPIP-LAV 60

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ + SG  G I+   +L   GDY  IATL+ +E+ Q +L+  + IT G  G+    R 
Sbjct: 61  VLALVASGVAGAILARFTLGLSGDYFGIATLVFAEMIQLLLLNERDITRGPMGLPGIPRP 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
            ++G+                   I+   V +    L   ++  +       A + +R++
Sbjct: 121 AWMGSGHEG--------------LIWFLAVAVIGTVLVFFLVRRISNAPFGRALKVVRED 166

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +    +L       K  A  + S   G AG  +A     ISP  F  +E I V+  V++G
Sbjct: 167 EFVAQALGKNTFILKTKAMVMGSVLAGFAGVLWAHYITYISPSDFTLNETIFVLLCVVVG 226

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  +         +++   E    +         +F          +    L  ++L R 
Sbjct: 227 GKGTNVGPLVGAFVIVFFGEFVRFL-----PIPSEFSRFVAPLQGMVYGALLIFMMLKRP 281

Query: 337 HSLLRLRTP 345
             L+     
Sbjct: 282 QGLISESRR 290


>gi|295696246|ref|YP_003589484.1| inner-membrane translocator [Bacillus tusciae DSM 2912]
 gi|295411848|gb|ADG06340.1| inner-membrane translocator [Bacillus tusciae DSM 2912]
          Length = 346

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 57/291 (19%), Positives = 117/291 (40%), Gaps = 14/291 (4%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             + + + +       +   + +   +Y M   GLS+++G  GL+SL     + IGAY  
Sbjct: 24  ALIAVVVAICPWIVGPFWTQIMLLTGLYAMCILGLSLLIGHAGLVSLAQAAFWGIGAYVS 83

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
             L  ++G    L +     ++G    ++G  + +  G YL + TL    I   I ++  
Sbjct: 84  AFLSLKHGFPTTLTLVAGLAVAGIVAFLLGWLTRRLAGHYLTLVTLGAGMIMNLIFVEES 143

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
             T G +G+     L      + S ++               YY++ G+  L   +I  L
Sbjct: 144 QWTGGASGLSEIPHLSVGSWVIDSDLQM--------------YYLVWGILALLLVLIWNL 189

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +   +  +  RD+  A  +    +   K+ AF  S     ++G  +A     ISP++F
Sbjct: 190 LHSPWGHTLQATRDSSTAASATGVDVGRFKVQAFVASGVLAALSGGLYAHYMTFISPELF 249

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
            F ++I+ + + ++GG  S+        +L  + E    +   +  + +  
Sbjct: 250 SFKQSILFLLMAVVGGPLSIWGPIVGAMLLTVLTEALRSIMPMFGTNTVGP 300


>gi|294678946|ref|YP_003579561.1| branched-chain amino acid ABC transporter permease LivM
           [Rhodobacter capsulatus SB 1003]
 gi|294477766|gb|ADE87154.1| branched-chain amino acid ABC transporter, permease protein LivM-3
           [Rhodobacter capsulatus SB 1003]
          Length = 358

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 79/344 (22%), Positives = 141/344 (40%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F +RL++      L         +  +       + +++ +  LIY + A GL+I+VG  
Sbjct: 20  FPIRLDRMGYFAALAT------AYCVVPFFIDDYWANAVFVPFLIYAIAAIGLNILVGYA 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +   + I + + ++  I+   G++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYAVYKLMTAFPEVPILIHVLLAGGITACVGVLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  K     N                T      F  F +        
Sbjct: 134 AVATLAAQFFLVWLFNKVPWFYNYS---------ASGQITAPDRTMFGVFITGAQTTAAA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L +  L A +   L R  I   W  IRD   A   +    + AK++AFAVSS FI
Sbjct: 185 KYLFCLVLLTLVALMARNLTRGTIGRKWMAIRDMDIAAEIIGVNPLSAKVTAFAVSSFFI 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G+AGA   +     +   + F  +++ +V+ +VI+GG+ S+       A L+ +      
Sbjct: 245 GIAGALLFSVYLGAAEVGEAFGINKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVFLKN 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +       L             ++   + + +++  H L +L  
Sbjct: 305 V---LVGGLGWPTDVAAHLELMIVGALIVVFLIVEPHGLAQLWR 345


>gi|23335565|ref|ZP_00120800.1| COG4177: ABC-type branched-chain amino acid transport system,
           permease component [Bifidobacterium longum DJO10A]
 gi|189440755|ref|YP_001955836.1| branched-chain amino acid ABC transporter permease [Bifidobacterium
           longum DJO10A]
 gi|189429190|gb|ACD99338.1| ABC-type branched-chain amino acid transport system permease
           component [Bifidobacterium longum DJO10A]
          Length = 362

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 70/341 (20%), Positives = 129/341 (37%), Gaps = 42/341 (12%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +    ++     +  +  YI  + +   I ++    L++ +G LG L+L C    A
Sbjct: 16  FIGILAAFGIVMALCESGLAGSYIKGIMMTACIAIIMTTSLNLTIGVLGQLTLGCCGFEA 75

Query: 76  IGAYSYVILGSR---------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           IGAY   +                   L   +  +++   G+++G+P+L+  GDYLAI T
Sbjct: 76  IGAYVAALTSKYMVAAGIAIDPTARFLLTTLIGGVVACVFGILIGIPALRLHGDYLAIIT 135

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + I+   K                        L +     +   I      YV
Sbjct: 136 LGFGEIIRVIIQNLKVAGG------------------MGLDKGAAGQALIGIERTANLYV 177

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  ++  ++    R+    A + IRD++ A  +      + K+  FA+S+ F G+AG
Sbjct: 178 VFWIMVVTVVVLFMFGRSRYGRAVKAIRDDEIAAGASGLNTTYLKVLVFAISAFFAGIAG 237

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             FA     ++P M  +  +I  + +V+ GGM SL+    +   L  + EL      Y  
Sbjct: 238 GIFAQYIGSLNPTMAGWLNSINYVIMVVFGGMGSLTGSIVSAIGLTILPELLRAFADY-- 295

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                              + L LV++ R   +      S 
Sbjct: 296 -------------RMLAYSVVLVLVMIFRPQGIFGSWEFSL 323


>gi|311105886|ref|YP_003978739.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310760575|gb|ADP16024.1| inner-membrane translocator 34 [Achromobacter xylosoxidans A8]
          Length = 606

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 104/312 (33%), Gaps = 18/312 (5%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R ++   +L L  +    L+    G      Y+ ++ I+ L + + A  + ++ G  G L
Sbjct: 20  RTSRSRSLLGLAGLC---LVLTAAGPWLFDTYMLNVLIKALFFAVAAVTVDVLWGYTGYL 76

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           +      + +GAY+  +  + YG S  +    +    GA  ++  +          +   
Sbjct: 77  TFGQSAFFGVGAYAAGLAFTHYGFSPAIAALAALAAVGAAALLALVTGWLSFYRGASPFF 136

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
             +  +   I++    ++ G                            +F +     Y +
Sbjct: 137 ATVISLVLPIVLMQLVLSGGT---------------FTGSSSGLTGYETFDLSLEAWYVI 181

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
             G   + A +   + R+        +RDN+     L       +++      A  G+AG
Sbjct: 182 AAGGLSVVALLAWVVVRSDGGRILVALRDNEARCSYLGLNTAHWRIALLVACGAVAGLAG 241

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             + A    ++P++  F     +I  V LGG  ++        ++        G   + +
Sbjct: 242 FGYGAFSGVVAPELTGFVFGTELIIWVALGGRGTIWGPVLGAILINVAGSYLSGNIPFVW 301

Query: 307 NSLLKFDCSFNM 318
             LL       +
Sbjct: 302 QLLLGVTFVLVI 313


>gi|227485097|ref|ZP_03915413.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Anaerococcus lactolyticus
           ATCC 51172]
 gi|227236930|gb|EEI86945.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Anaerococcus lactolyticus
           ATCC 51172]
          Length = 324

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 80/348 (22%), Positives = 145/348 (41%), Gaps = 45/348 (12%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
            S    K   I   L +++ +++   +G     +Y  ++ I I I ++ +  L++ VG L
Sbjct: 1   MSTNKKKTYLITTALVILFFVIIQGLIGGGIINRYWQNILILICINIIMSTSLNLTVGVL 60

Query: 64  GLLSLNCVIAYAIGAYSYVILGSR----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           G ++L      AIGAY+  +          L  +L + ++ +++   G+++GLP L+  G
Sbjct: 61  GQINLGHAGFMAIGAYAAALFLKSGLVGGFLGYFLSLIIAGVVATVFGILIGLPVLRLTG 120

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           DYLAI TL   EI + ++      T G  G+      +  G                   
Sbjct: 121 DYLAIVTLAFGEIIRVLIENL-SFTGGAQGLAGIPTTHDFGK------------------ 161

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
               Y+++              R      A  +IRDN+ A  S    I   K  AFA+S+
Sbjct: 162 ----YFLVAAFLVTMIFTYASCRH---GRAVLSIRDNELAAESCGINITKYKTFAFALSA 214

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            F G+AGA +A S   ++ ++F ++++   + +V+LGGM S++    +T  L  + E+  
Sbjct: 215 LFAGVAGALYAQSFGVLAANIFNYNKSFDYLVMVVLGGMGSMTGAIFSTIGLTILPEVLK 274

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
            M                     +  + L  V++ R   LL  +  S 
Sbjct: 275 PMAE---------------WRMVIYAVILIAVMIYRPQGLLGRKEFSL 307


>gi|330467490|ref|YP_004405233.1| inner-membrane translocator [Verrucosispora maris AB-18-032]
 gi|328810461|gb|AEB44633.1| inner-membrane translocator [Verrucosispora maris AB-18-032]
          Length = 368

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 59/310 (19%), Positives = 123/310 (39%), Gaps = 19/310 (6%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---- 91
             Y +     +  Y+    GL+I+ G  G LSL      A GAY+  +  S +       
Sbjct: 50  DSYRNFQLATVAAYLCATAGLTILTGLCGQLSLGHGALMATGAYTVALCQSAFFDRGVTS 109

Query: 92  ---IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
              + L +  +  ++   G+++G+ + + RG YLA  TL ++ +   + + +  + NG+ 
Sbjct: 110 GAVLLLSLVAAVAVTVTVGLVVGVAAARLRGPYLAGLTLAVAVVVPALTVTFDGLFNGEQ 169

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G+ V       G  +      +              ++  G   L   ++  L R+    
Sbjct: 170 GLPVPVAPAPAGLGLYFPHERW------------QLWMAAGATLLCLVVLANLVRSRYGR 217

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
            +R +RD++ A       +   ++ AF VS+A  G+ GA  A     +SP  F  + ++ 
Sbjct: 218 LFRAVRDDEVAARLAGIHVARTQVIAFVVSAAGAGLGGALLAVLAQSVSPGAFGLNLSLF 277

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           ++  V++GG+  L+       +L+ + +L   +   +  S              +    L
Sbjct: 278 LLMAVVIGGLGRLAGAVWGAFLLVVLPDLTHSLTNLFTLSPATAQRLEGNLPLAIFGATL 337

Query: 329 FLVILMRSHS 338
            +V++     
Sbjct: 338 IVVMIAAPGG 347


>gi|327193241|gb|EGE60147.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CNPAF512]
          Length = 328

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 66/310 (21%), Positives = 123/310 (39%), Gaps = 25/310 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
              +  Y+    I  LI+++ A GL+++VG  GLLSL     + IGAY+  +L   YG  
Sbjct: 31  PFVASTYVVHALIIALIFMLPAHGLNLLVGYTGLLSLAQAAFFGIGAYASGLLAVTYGTP 90

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            ++ +  + + +GA  + +G+P+L+ R     + TL    I Q I   W  +T G  G+ 
Sbjct: 91  FYVNVAAAGLAAGAIALPLGIPALRLRSTSFVMCTLGFVIIGQAIAKNWILLTRGDMGLS 150

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              +                  S  V      YY+ L +  L+   +  + R+       
Sbjct: 151 SIPKP----------HFALGPLSFTVSGTTAFYYLALTVGILATLAVWMIVRSPAGRNMI 200

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            IR+N+    S+       KL  F +S+ F G+ G+ +A     +SP  F+   +  ++ 
Sbjct: 201 AIRENETLAESVGIPTWRYKLIVFMLSAVFAGVGGSLYAHYLTVVSPLTFQMYYSTTMLI 260

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           IV+ GG  ++S +   + + +G+ E                             + L ++
Sbjct: 261 IVLGGGAGTISGVVFGSLLFVGLTEALR---------------VTPELRMIAYGLCLLVL 305

Query: 332 ILMRSHSLLR 341
           +         
Sbjct: 306 VFWFRKGFAP 315


>gi|332799750|ref|YP_004461249.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp.
           Re1]
 gi|332697485|gb|AEE91942.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter
           sp. Re1]
          Length = 324

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 70/320 (21%), Positives = 135/320 (42%), Gaps = 29/320 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                  Y   +  Q LI ++   GL+ + G  G ++L     YA+GAYS  +L  + G+
Sbjct: 20  PVIDKNAYHHMLLNQTLINIIVVMGLNFITGLTGQMNLGTAGIYAMGAYSSALLSIKLGV 79

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S WL I  + +I    G  +G PSL+ +G YL++ T+  SEI + IL  W   T G  G+
Sbjct: 80  SAWLGIAFALLIGYIIGHALGYPSLRVKGVYLSLTTIGFSEIVRLILTNWANFTGGAQGL 139

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                +   G    +  +              +YY+ L +  L       L  +    A+
Sbjct: 140 QNIPCISLFGFKFDNAFK--------------IYYLYLFITVLLCITAKRLVASKWGRAF 185

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           ++I+D+ +A  +    I   K+ AF +++ +  + GA +A     I+P  F    +I  +
Sbjct: 186 KSIKDSAEAAEACGINIADIKIKAFTLATLYGCLGGAMYAHLIGYINPMGFTQDISINYL 245

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            ++++GG+ S+         +  + EL   +  YY+                +  +   +
Sbjct: 246 VMLMIGGIGSVEGNIIGAITVTILPELLRFLKDYYW---------------LIFSVITLI 290

Query: 331 VILMRSHSLLRLRTPSNFLE 350
             ++  + ++ L  P   ++
Sbjct: 291 FAILLPNGIITLIKPLERVK 310


>gi|171057770|ref|YP_001790119.1| urea ABC transporter permease UrtB [Leptothrix cholodnii SP-6]
 gi|170775215|gb|ACB33354.1| urea ABC transporter, permease protein UrtB [Leptothrix cholodnii
           SP-6]
          Length = 528

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 99/310 (31%), Gaps = 17/310 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      I ++ A GL+I  G +G++++       IGAY+  ++ + +   +  L   
Sbjct: 235 LFTGISLGSILLLVALGLAITYGLMGVINMAHGELMMIGAYATWLVQNLFRQHLPGLFDW 294

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +     +             ++   +     + +L  W        G+        
Sbjct: 295 YIAFAIPASFLAAALVGAALER--SVIRWLYGRPLETLLATWGISLVLMQGVRSLFGAQN 352

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +     S +         +        ++     + A + L + RT +    R +  N++
Sbjct: 353 VQVENPSWLSGGVVALDNLTLPYNRLAIIAFAFMVLAGVALLIARTRLGLFVRGVTQNRR 412

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +          AF++ +   G+AG   A S+          S  +    +V+ GG+
Sbjct: 413 MAACMGVNTARIDTYAFSLGAGIAGLAGC--ALSQVGNVGPDLGQSYIVDAFMVVVTGGV 470

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L+    A   L  + +   G +                    ++++ + + I  R   
Sbjct: 471 GQLAGTVYAGLGLGVLNKFLEGYSGAVLAK-------------IMVLVCIVVFIQKRPQG 517

Query: 339 LLRLRTPSNF 348
           +  ++  S  
Sbjct: 518 MFAMKGRSAE 527


>gi|316935583|ref|YP_004110565.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315603297|gb|ADU45832.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 314

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 67/325 (20%), Positives = 135/325 (41%), Gaps = 30/325 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             ++   ++   L       Y   +   + +  + A GL+I++G  G +SL     + IG
Sbjct: 10  AILIALAVVMAVLPLLFPSSYYFRVAALVWVSALAAIGLNILMGKAGQVSLGHAGFFGIG 69

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  I  + +GL   L + V A++S     ++G P L+ +G YLAIATL +  +   ++
Sbjct: 70  AYAVAIGPAHFGLHALLAVLVGALLSAMLAFLVGRPILRLKGHYLAIATLGLGVLVAMVI 129

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                 T G  G+ V     F      S                  Y++  G+  +    
Sbjct: 130 TTESGWTGGPDGMPVPKLSLFGWRVSGSTTW---------------YWITAGLLLIGTWF 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L L  T    A+R + D++ A  +    +   KL AF +++ +  +AG+  A     ++
Sbjct: 175 ALNLDDTPTGRAFRALHDSEIAARTAGVHVERFKLQAFVIAAVYASIAGSALAMMNGFVN 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           PD   F  ++ ++++V+LGG+ S+       A+L+ + +L      Y             
Sbjct: 235 PDQAGFLHSVELVTMVVLGGLGSIVGSIVGAAVLVVLPQLLTVFQDY------------- 281

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                L+ + + + ++     ++ +
Sbjct: 282 --EHFLLGLIIIVSMIFMRDGMVPM 304


>gi|146342685|ref|YP_001207733.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. ORS278]
 gi|146195491|emb|CAL79516.1| putative branched-chain amino acid ABC transporter, permease
           protein [Bradyrhizobium sp. ORS278]
          Length = 343

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 61/322 (18%), Positives = 132/322 (40%), Gaps = 22/322 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +     L +   LG     ++   +   + I  + A  L+++ G  G ++        +G
Sbjct: 5   VIAAVILAVLAILGTLLLGRFGAYLMHAVAIAAIGALSLNLLTGFCGQINFAQAGLLGVG 64

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  + G+       L +PV+ + +    M++GLP+L+ RG Y AIATL    I + + 
Sbjct: 65  AYTAGLAGNAGWD--VLALPVAGLAAVVTAMLIGLPALRLRGLYFAIATLAAQFILEYLF 122

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
              +PIT+G +G+ +                        +  +     V + +  ++  +
Sbjct: 123 KFAEPITHGVSGLLIRP---------------MTVLGQPIQTDQGYAIVAIVLLLVTFLV 167

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           + WLRRT +  A+  +R+N+     +   +   K+ AF +S  F G+AG     +     
Sbjct: 168 MQWLRRTDLGRAFLVVRENEVVAKGMGINVARTKMLAFMISGFFAGVAGGLIGFTARLAH 227

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F  S ++  ++++I+GG+ S+S        +  + E    +       ++      +
Sbjct: 228 PESFGMSMSVDYVAMIIVGGLGSMSGAVLGAGFITLLPEAIQRLGE-----IVHISDLLS 282

Query: 318 MRHTTLMVIALFLVILMRSHSL 339
                   + + + ++     L
Sbjct: 283 ALREMAFGLLIIVFLIFEGRGL 304


>gi|27376560|ref|NP_768089.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27349701|dbj|BAC46714.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 535

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 91/297 (30%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++          L   S +I+     ++ 
Sbjct: 256 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQEVIRTRYPGLFDYSLLIAVPLAFLVA 315

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                      +I   +     + +L  W      +  +              S      
Sbjct: 316 GAIGVLIER--SIIRFLYGRPLETLLATWGLSLVLQQAVRTMFGPTNREVGNPSW-MSGA 372

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++L     + A ++  LR TA+    R +  N++   S+        
Sbjct: 373 FELGQITITYNRLWILCFTLAVFAILLAMLRYTALGLEMRAVTQNRRMAASMGIATSRVD 432

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   A S+          S  I    +V+ GG+ +L         L
Sbjct: 433 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFTL 490

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +    +                      +++ + L I  R   L  L+  +  
Sbjct: 491 GIANKFLEPVAGAVLGK-------------IAILVLIILFIQKRPRGLFALKGRAVE 534


>gi|322390028|ref|ZP_08063566.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus
           parasanguinis ATCC 903]
 gi|321143282|gb|EFX38722.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus
           parasanguinis ATCC 903]
          Length = 315

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 83/340 (24%), Positives = 145/340 (42%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + +   L V    L+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNLVWLGLLVAGFALIQVLVAAGVLNLFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAYS  ILG  S    + +  + + A+I+G   +I+G+P+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYSAAILGSKSPTYGAFFGAMVLGALIAGVVALIVGVPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + +++    +TNG AGI                                   ++
Sbjct: 126 GVSEIIRILIVNGGTLTNGAAGILGLPAFTTWQ-------------------------LV 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++    +   R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+
Sbjct: 161 YLFVVITTIFTINFLRSPIGRSTLSVREDEIAAESVGINTTKVKVIAFVFGAITAAIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F+  I V+ IV+ GG+ S+S    A  +L  +  +          
Sbjct: 221 LQAGFIGSVVPKDYSFTNTINVLIIVVFGGLGSMSGTVVAAIVLGILNMVLQ-------- 272

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                   F+     +  +AL LV++ R   LL     S 
Sbjct: 273 -------DFSSVRMIIYSLALILVMIFRPGGLLGTWEFSL 305


>gi|126738255|ref|ZP_01753976.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
 gi|126720752|gb|EBA17457.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
          Length = 358

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 73/344 (21%), Positives = 142/344 (41%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ +++   + +       + F  +    +  + +++ +  LIY + A GL+I+VG  
Sbjct: 20  FPIKFDRFRYYVVMA------VAFGLIPFLINDYWANAILLPFLIYSIAAIGLNILVGYA 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +   +S+++ + ++  I+G   ++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKLMTAFPEVSMFIHVILAGGITGLVCVLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N                       F    +        
Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGQINAPERDTFGIIITGPNASAWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L      A +   L R  +  +W  IRD   A   +    + +KL+AFAVS  FI
Sbjct: 185 TYLFCLIFLTFCALVARNLTRGTVGRSWMAIRDMDIAAEIIGVNPLKSKLTAFAVSGFFI 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F A         + F  +++ +V+ +VI+GG+ S+       A L+ +  L   
Sbjct: 245 GVSGALFFAIYLGAVEVGEAFGITKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVLLKV 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +              F      ++   +   +++  H L +L  
Sbjct: 305 VGVDVLGWPTDIVAHF---QLVIVGALIMFFLIVEPHGLAQLWR 345


>gi|116493835|ref|YP_805569.1| amino acid ABC transporter permease [Lactobacillus casei ATCC 334]
 gi|191637085|ref|YP_001986251.1| Branched-chain amino acid ABC transporter, permease protein
           [Lactobacillus casei BL23]
 gi|227533083|ref|ZP_03963132.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|301065411|ref|YP_003787434.1| putative amino acid ABC transporter permease [Lactobacillus casei
           str. Zhang]
 gi|116103985|gb|ABJ69127.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Lactobacillus casei ATCC 334]
 gi|190711387|emb|CAQ65393.1| Branched-chain amino acid ABC transporter, permease protein
           [Lactobacillus casei BL23]
 gi|227189264|gb|EEI69331.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|300437818|gb|ADK17584.1| Predicted amino acid ABC-type transport system, permease component
           [Lactobacillus casei str. Zhang]
          Length = 316

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 78/344 (22%), Positives = 144/344 (41%), Gaps = 43/344 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   I     +   +L+ +         +I++  + I I ++ A GL++++G  G  SL 
Sbjct: 6   RSKLIWLATMIAGFVLIDIGELTGVINGFIENALVTIGINIILAVGLNLIIGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILGSR--YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+       L  +L + V  +++    +I+G+P+L+ RGDYLAIAT+
Sbjct: 66  HAGFMAIGAYATAIITQNISTPLGFYLAMLVGMIVAIIAALIVGIPTLRLRGDYLAIATM 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +EI + I+     ITNG AG++    L    T                         +
Sbjct: 126 GAAEIIRVIINNL-KITNGPAGMFNIPPLASWPT-------------------------V 159

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  ++  I++    +    A   IRD+  A  S+       KL+AF + +A   + G+
Sbjct: 160 YILMCVTTVIVVNFIHSRAGRAVMAIRDDDIAAESIGINPTKWKLAAFVLGAATAAIGGS 219

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A+    I+P  F    +I ++ IV+LGG+ S++    A  +L  +  +          
Sbjct: 220 LHASYLQTIAPGDFGIMNSIALLIIVVLGGVGSITGTFVAAVVLGIIDTVLQNF------ 273

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                          +  +AL L+++ +   LL     S   +R
Sbjct: 274 ---------GTLRMVIYALALILLMVFKPAGLLGHYELSFKRKR 308


>gi|114707991|ref|ZP_01440882.1| putative ureashort-chain amide or branched-chain amino acid uptake
           ABC transporter permease protein, possibly fusion
           [Fulvimarina pelagi HTCC2506]
 gi|114536532|gb|EAU39665.1| putative ureashort-chain amide or branched-chain amino acid uptake
           ABC transporter permease protein, possibly fusion
           [Fulvimarina pelagi HTCC2506]
          Length = 568

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 89/294 (30%), Gaps = 18/294 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++          L   S  I+     ++ 
Sbjct: 289 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQELIRNHAPELFAWSLAIALPLAFLVS 348

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                     L     +     + +L  +      +  +                     
Sbjct: 349 GLVGLGMERGL--IRFLYGRPLETLLATFGVSLILQQAVRTIFGPTNREVGNPDW-MSGA 405

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++++    + A ++L L +T +    R +  N++   ++     +  
Sbjct: 406 FEVGLMSVTWNRLWIIVFALVVFAGLLLVLNKTVLGLQMRAVTQNRQMASAMGIRTPWVD 465

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              FA+ S   G+AG   A S+             I    +V+ GG+ +L         L
Sbjct: 466 AMTFALGSGIAGIAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLVGAMSL 523

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
             + +                          ++++ + L I  R   L   +  
Sbjct: 524 GVINKFLEPYAGAVLGK-------------IVVLVIIILFIQKRPRGLFAQKGR 564


>gi|91787502|ref|YP_548454.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91696727|gb|ABE43556.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas sp. JS666]
          Length = 368

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 61/332 (18%), Positives = 126/332 (37%), Gaps = 15/332 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A+V  L+  +      +  Y   M  +++I  +FA  L ++ G  GL+SL     + I 
Sbjct: 17  VALVLGLIALVAFPFAGTDFY-TQMVTRMMIMAIFAMSLDLLQGVTGLVSLGHAAFFGIA 75

Query: 78  AYSYVILGSRYGLS-IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
            Y+   L  +     +W  +PV+ + SG   +++G   ++  G Y  + T+  +++   +
Sbjct: 76  GYALAFLTPQGEPVSLWWTLPVAVLASGLAALVIGFFVVRTHGIYFIMVTMAFAQMVFYL 135

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
               K +               L    +     F +    +  +  +YY  L       +
Sbjct: 136 FFDNKVLGGSDG----------LYINFKPSAELFGWTPFDLDGKRTLYYFTLATLLAVYA 185

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L  +    A   IR N+    ++       KL+AF ++ +  G+AG  + A    I
Sbjct: 186 FLRRLLWSPFGRALAGIRVNEHRMRAMGYGTFGYKLAAFTLAGSLAGLAGYLWGAQTGYI 245

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM---NFYYFNSLLKFD 313
           +P++  F  +   I +VILGGM + +           ++ +   +   +      L    
Sbjct: 246 NPELMGFHMSAHAIMMVILGGMGNFAGAIVGAFAFEYLLHVFKDLPTVDAGGVVGLGGGS 305

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
            +        M + +  V++     LL L   
Sbjct: 306 VNLGKHWQLWMGLFIVAVVVFAPRGLLGLVER 337


>gi|163739379|ref|ZP_02146790.1| inner-membrane translocator [Phaeobacter gallaeciensis BS107]
 gi|163743626|ref|ZP_02151002.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161383097|gb|EDQ07490.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161387449|gb|EDQ11807.1| inner-membrane translocator [Phaeobacter gallaeciensis BS107]
          Length = 358

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 73/344 (21%), Positives = 141/344 (40%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ ++    + L       L FL +    +  + +++ +  LIY + A GL+I+VG  
Sbjct: 20  FPIKFDRIRYYVVLA------LAFLVVPFVVNDYWANAILLPFLIYSIAAIGLNILVGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +   +S+++ + ++  I+    +  GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKLMTAFPEMSMFIHVLLAGGITALVCIGFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N  A   ++               F    +        
Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYSASGQISAP---------ERDVFGIIITGPNAPAWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L      A +   L R  +  +W  IRD   A   +    + AKLSAF VS  FI
Sbjct: 185 TYMFSLIFLAFCALVARNLTRGTVGRSWMAIRDMDIAAEIIGVNPLKAKLSAFGVSGFFI 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F +         + F  +++ +V+ +VI+GG+ S+       A L+ +  +   
Sbjct: 245 GVSGALFFSVYLGAVEVGEAFGINKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVVLKV 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +                     ++   + + ++   H + +L  
Sbjct: 305 VGVDVLGWPTDI---VAHIQLVIVGALIVIFLIAEPHGIAQLWR 345


>gi|90019876|ref|YP_525703.1| Fis family transcriptional regulator [Saccharophagus degradans
           2-40]
 gi|89949476|gb|ABD79491.1| inner-membrane translocator [Saccharophagus degradans 2-40]
          Length = 537

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 99/319 (31%), Gaps = 22/319 (6%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           L      + +        + ++ A GL+I  G +G++++       +GAY+   +   + 
Sbjct: 240 LAFFGFTENVVFGLSLGSVLLLAAIGLAITFGVMGVINMAHGEMIMLGAYTTFAVQQFFP 299

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
             I   + ++   +      +G+   +    +L    L       + L+    I+     
Sbjct: 300 GLIEYSLFIAIPAAFLVSGSVGVVIERTVIRHLYGRPL-------DTLLATFGISLLLQQ 352

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                    +       +      +  + +     Y+ +   F+   + L L++T +   
Sbjct: 353 AVRVYHSNNVPVITPEWMSGSWVVNGALSFTYNRIYIFIFALFVLGMLALLLKKTLLGLQ 412

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R +  N+    S+           F + S   G+AG   +   +        F   I  
Sbjct: 413 MRAVTQNRAMANSMGIRSSHVDALTFGLGSGIAGIAGVAISQITNVGPNLGQGFI--IDS 470

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             +V+ GG+ +L     A   L  V +                          +++I + 
Sbjct: 471 FMVVVFGGVGNLLGTFFAAMGLGVVTKFLEPEVGAVVGK-------------IMVLIFII 517

Query: 330 LVILMRSHSLLRLRTPSNF 348
           L I  R   L  L+     
Sbjct: 518 LFIQWRPRGLFALKGRFVE 536


>gi|317401155|gb|EFV81804.1| hypothetical protein HMPREF0005_01226 [Achromobacter xylosoxidans
           C54]
          Length = 302

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 60/312 (19%), Positives = 134/312 (42%), Gaps = 30/312 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
              +  Y+  +   ++++V+ A GL IV+G  G  +L+    Y +G Y+  ++ + +   
Sbjct: 21  PFVASGYVIYVVNLLMVFVVLALGLHIVIGETGQFALSHAAFYGVGIYTAGLINNLWHPP 80

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            ++ I    +++   G ++G  +L+ R  YLA++T    E  Q + + W+ +TNG  G  
Sbjct: 81  FFVSILAGGLLAAVLGYLIGALALRMRDIYLALSTFAFGEAMQWVFLNWQSVTNGSNGFR 140

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           ++    F                  ++ +I  Y  ++ +  L   + + L R+ + +A+R
Sbjct: 141 ISPATLFGYE---------------LVSDIKAYPFVVAIAALLLWVTVALSRSQLGSAFR 185

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R++  A  ++   +   K +AF +S+A+ G+AG  +      I P+   F   I++++
Sbjct: 186 AVRESDVAAQAMGVNVNAIKRTAFTLSAAYAGIAGGMYTTFASFIHPESLGFQTTILILT 245

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +V++GG+ S+            + EL      +                  +  + L   
Sbjct: 246 MVVVGGIGSVRGAIAGAIGFGLISELLRQALSF---------------QEIIYGVILMGF 290

Query: 332 ILMRSHSLLRLR 343
           ++     L   R
Sbjct: 291 MMFAPKGLFAGR 302


>gi|119468886|ref|ZP_01611911.1| putative branched-chain amino acid ABC transporter, permease
           protein [Alteromonadales bacterium TW-7]
 gi|119447538|gb|EAW28805.1| putative branched-chain amino acid ABC transporter, permease
           protein [Alteromonadales bacterium TW-7]
          Length = 357

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 67/325 (20%), Positives = 129/325 (39%), Gaps = 19/325 (5%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V    +  L         Y  ++ IQI    + A GL+I+VG  G +SL     +  GA+
Sbjct: 31  VAIIAIALLCCAPFLVDAYFLTLFIQISYLGIAALGLNILVGYTGQISLGHGAFFGFGAF 90

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +   L   +G+ + L IP++  ++   GM+ GLP+ + +G YLAIATL    I ++   +
Sbjct: 91  ASAWLNMSFGIPVLLCIPIAGFLTMLVGMLFGLPASRIKGLYLAIATLAAQFILEDFFAR 150

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
            +  T G AG        F                         +Y+ L           
Sbjct: 151 AQWFTGGSAGSSADPVSIFGFVFNTDQ---------------SFFYIALFALVFMYIWGC 195

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L R+    A+  +RD+  +   +   +   +L +F VSS + G+ GA +A     +S +
Sbjct: 196 NLMRSREGRAFIAVRDHYLSAEIMGIKLNKYRLLSFGVSSFYAGIGGALYAHYLGYVSAE 255

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG----MNFYYFNSLLKFDCS 315
            F    +I  ++++I+GG+ S+         ++ + E+       M    + ++      
Sbjct: 256 GFTLFMSIQFLAMIIIGGLGSIKGTLMGVVFMVFLPEMLESGVGLMKMTDWGNIPMVVDG 315

Query: 316 FNMRHTTLMVIALFLVILMRSHSLL 340
                   + + + L ++     + 
Sbjct: 316 LAYIKEMAIGLVIILFLIFEPEGMA 340


>gi|154244595|ref|YP_001415553.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154158680|gb|ABS65896.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 347

 Score =  101 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 64/347 (18%), Positives = 127/347 (36%), Gaps = 35/347 (10%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
                 L++F  +       Y+ +  I   I  + A  L++++G  G LSL  V  + IG
Sbjct: 4   FIAPLFLVVFALVPLGLKDPYLLNALIITGILTICAMSLNLLLGFTGQLSLGHVAFFGIG 63

Query: 78  AYSYVILG-------------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           AY   +               +  G S  +   ++  ++G CG ++G  S + RG Y  I
Sbjct: 64  AYVSALTALGFDVSLPFGLRVTHEGGSPLMGFVLAVGLTGLCGYLIGRLSFRVRGAYFVI 123

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            T+  +E+ + + + W  +T G   +     +          +         +  ++  Y
Sbjct: 124 VTISFAEVVRLVALNWVELTQGPLALTAIPNMV---------LPVPGLGDVALRSKMQNY 174

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y++L +  +S  II  L  +    A R +++N+    SL          A  +S+A  G 
Sbjct: 175 YLVLAVAAVSYLIIARLVASRFGRAMRGLKENESLALSLGINATRTLTVAATISAAMAGA 234

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG+ +A     I PD+F FS  + ++ +V+ GG  +L+       +   +          
Sbjct: 235 AGSLYAHYIRIIDPDVFLFSYTVTMVIMVVSGGKGTLAGPLVGGILFGLLPVALR----- 289

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                             +    L  ++ +    ++          R
Sbjct: 290 --------PVMAPEAQWIVYGAILIAILFLMPRGIVPALESLALRRR 328


>gi|218780943|ref|YP_002432261.1| branched-chain amino acid ABC transporter permease
           [Desulfatibacillum alkenivorans AK-01]
 gi|218762327|gb|ACL04793.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 353

 Score =  101 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 67/324 (20%), Positives = 119/324 (36%), Gaps = 28/324 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+   +  L L       YI  + I   I+ + A    ++ G  G ++    + + + 
Sbjct: 26  VTVMVFAIALLALPLVTQDYYILRIMILTSIFAILAASWDLLSGFTGQMNFGHALFFGVA 85

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   +L  R GL  +  IP+ AM +   G+I+G+P L+ +G YLA+ TL    I   ++
Sbjct: 86  AYVTALLNLRLGLPPYFSIPLGAMGAVLTGLIVGIPCLRLKGSYLALTTLAFPIILMGLV 145

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
             +  IT G+ G+    +L                           YYV   +  +   +
Sbjct: 146 FAFPGITGGELGLSGLTKLTGSRVMD--------------------YYVTTSLMLILGGV 185

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  +  +        IR+++ A  +        KL AF +S  F G+AG  +A       
Sbjct: 186 MWKITDSNTGVILHAIREDEVAARAAGINTTRYKLLAFCLSGFFAGIAGGLYAHFMRLAG 245

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P   +   +  VI   + GGM S+        IL   +E+            L    S  
Sbjct: 246 PSTLEIGLSFQVIIWSVFGGMVSIYGPIAGVYILNPFMEVLRIF--------LDNFPSLP 297

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                +    + L +      L+ 
Sbjct: 298 EMRMFIFAALVLLTLRFMPEGLIP 321


>gi|312868272|ref|ZP_07728472.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus parasanguinis F0405]
 gi|311096017|gb|EFQ54261.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus parasanguinis F0405]
          Length = 315

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 83/340 (24%), Positives = 145/340 (42%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + +   L V    L+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNIVWLGLLVAGFALIQVLVAAGVLNLFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAYS  ILG  S    + +  + + A+I+G   +I+G+P+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYSAAILGSKSPTYGAFFGAMVLGALIAGIVALIVGVPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + +++    +TNG AGI                                   ++
Sbjct: 126 GVSEIIRILIVNGGTLTNGAAGILGLPAFTTWQ-------------------------LV 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++    +   R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+
Sbjct: 161 YLFVVITTIFTINFLRSPIGRSTLSVREDEIAAESVGINTTKVKVIAFVFGAITAAIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F+  I V+ IV+ GG+ S+S    A  +L  +  +          
Sbjct: 221 LQAGFIGSVVPKDYSFTNTINVLIIVVFGGLGSMSGTVVAAIVLGILNMVLQ-------- 272

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                   F+     +  +AL LV++ R   LL     S 
Sbjct: 273 -------DFSSVRMIIYSLALILVMIFRPGGLLGTWEFSL 305


>gi|296876043|ref|ZP_06900099.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus
           parasanguinis ATCC 15912]
 gi|296432954|gb|EFH18745.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus
           parasanguinis ATCC 15912]
          Length = 315

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 83/340 (24%), Positives = 145/340 (42%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + +   L V    L+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNLVWLGLLVAGFALIQVLVAAGVLNLFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAYS  ILG  S    + +  + + A+I+G   +I+G+P+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYSAAILGSKSPTYGAFFGAMVLGALIAGIVALIVGVPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + +++    +TNG AGI                                   ++
Sbjct: 126 GVSEIIRILIVNGGTLTNGAAGILGLPAFTTWQ-------------------------LV 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++    +   R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+
Sbjct: 161 YLFVVITTIFTINFLRSPIGRSTLSVREDEIAAESVGINTTKVKVIAFVFGAITAAIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F+  I V+ IV+ GG+ S+S    A  +L  +  +          
Sbjct: 221 LQAGFIGSVVPKDYSFTNTINVLIIVVFGGLGSMSGTVVAAIVLGILNMVLQ-------- 272

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                   F+     +  +AL LV++ R   LL     S 
Sbjct: 273 -------DFSSVRMIIYSLALILVMIFRPGGLLGTWEFSL 305


>gi|110678081|ref|YP_681088.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
 gi|109454197|gb|ABG30402.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
          Length = 358

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 79/344 (22%), Positives = 149/344 (43%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F +R ++Y     L       +  + +    +  +++S+ +  LIY + A GL+I+VG  
Sbjct: 20  FPIRFDRYRYYAVL------FIAIVIIPFVINDYWVNSIFMPFLIYSIAAIGLNILVGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +   +S+++ + +S +I+   G++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKLMTAFPEVSMFIHVLLSGVITAGVGVLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N                       F    +        
Sbjct: 134 AVATLAAQFFLVWMFNRVSWFYNYS---------ASGQINAPERDTFGIIITGPNTDAWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L     SA I   L R ++   W  IRD   A   +    + AKL+AFAVSS F+
Sbjct: 185 AYVFCLIFTIASAIIARNLTRGSMGRQWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFV 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F A         ++F  +++ +V+ ++I+GG+ S+       A L+ +  L   
Sbjct: 245 GISGALFFAIYLGAVEVGEVFGITKSFLVLFMIIIGGLGSIFGSFAGAAFLVLLPVLLKV 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +   +F             +  ++   + + +++  H L +L  
Sbjct: 305 IGVDWFGWPTDI---VAHLNLVIVGALIIVFLIVEPHGLAQLWR 345


>gi|291287778|ref|YP_003504594.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809]
 gi|290884938|gb|ADD68638.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809]
          Length = 314

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 61/324 (18%), Positives = 120/324 (37%), Gaps = 29/324 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             V      + +G     +Y   +   ++I  +     ++++G  G++S+     Y IGA
Sbjct: 8   LFVLCAAALIGIGFGVDNEYYLGVATLMMINALNTAAFNVLLGYGGVISMGQAAFYGIGA 67

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y   +L   YG+   + + ++  ++     I+G P LK  G YLA+ATL    I    + 
Sbjct: 68  YVAAVLSVNYGVPPAVTLLIAPAMAFVVAWIVGYPVLKLHGHYLAMATLGFGMIVYIFMN 127

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           ++  IT G +G      L FLG  + +   F              Y  +     +   + 
Sbjct: 128 EFSGITGGPSGFMGIGNLSFLGFELATEKSF--------------YIFMSTFFLICVLLY 173

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
               ++ +    + I++++ A  S    +   KL  FA  +A   + G  +      ISP
Sbjct: 174 EVFDKSFLHYKLKFIKNSESACRSYGINVTRTKLMVFASVAAITALNGVLYTYYTHFISP 233

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F F  +I ++ +  +GG+  +S        L  + E+      +              
Sbjct: 234 VSFSFKYSISLVCMATVGGLGYISGGIVGAVFLGFIPEVFATFEDF-------------- 279

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
               +    L +VI+     +   
Sbjct: 280 -EMIIYGGLLAVVIMFFPGGIAGT 302


>gi|197294994|ref|YP_002153535.1| putative amino-acid transport system protein [Burkholderia
           cenocepacia J2315]
 gi|195944473|emb|CAR57075.1| putative amino-acid transport system component [Burkholderia
           cenocepacia J2315]
          Length = 347

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 54/298 (18%), Positives = 117/298 (39%), Gaps = 12/298 (4%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             ++    L    S     S+  ++L++ + A G ++++G  GLLS    I + +G+Y+ 
Sbjct: 32  LAVVAACVLPLVLSSG---SLATEVLVFALAALGCNLLLGYTGLLSFGQGIFFGLGSYTA 88

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            ++ +R   S+   +  +A+       ++G  S++ RG Y  + TL   ++F  +     
Sbjct: 89  GLVLTRGVASVTAALVAAAVFGAIAAALVGWFSIRQRGTYFVMLTLAFGQLFYFLAYTTP 148

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G  G+    R           +  F  P   +      Y  +  +      ++L +
Sbjct: 149 DVTGGDNGLLDIPRPA---------LSAFGHPLVSLDSPWRYYGFVAVLFVAVFWLLLRV 199

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R+        IRDN+    +    +   KL+AF +S A  G+AGA  A           
Sbjct: 200 SRSVFGRTLLAIRDNEARAAAAGYDVKRFKLAAFVISGAVTGLAGALHALMTGIAPLSNI 259

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            +  + +++ + ++GG  +L       A  +   +    +   +   L     + ++ 
Sbjct: 260 DYHTSEMILVMTVIGGTGNLFASVLGAAFYVLFADWLSTLWPRWLLLLGLVLIAVSLF 317


>gi|158321521|ref|YP_001514028.1| inner-membrane translocator [Alkaliphilus oremlandii OhILAs]
 gi|158141720|gb|ABW20032.1| inner-membrane translocator [Alkaliphilus oremlandii OhILAs]
          Length = 351

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 67/330 (20%), Positives = 132/330 (40%), Gaps = 45/330 (13%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL----- 90
             Y   +     IY +    ++++ G  GL SL      A+GAY+  +L           
Sbjct: 28  DSYKIRVLNLCAIYAVLGLSMNLINGFTGLFSLGHAGFMAVGAYTTALLTMTPQSKEATF 87

Query: 91  --------------SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                           ++ + +  ++S     ++G P+L+ +GDYLAIATL  SEI + +
Sbjct: 88  FLVPIVEPLAKIQLPFFVALIIGGLLSAMVAFLIGAPTLRLKGDYLAIATLGCSEIIRIV 147

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
             + + ITNG  G+                                  +   GM   +  
Sbjct: 148 FTQTQNITNGPTGLKSIPNTTN-------------------------LWWSFGMMVFTIL 182

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           I++ L  ++    ++ IRD++ A  S+   +   K+ +F + + F G+ G         I
Sbjct: 183 IMVALINSSYGKVFKAIRDDEIAAESMGINLFKHKVLSFVIGAFFAGVGGGLLGNLLGTI 242

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +P+MF+F+    V+ I++LGGM S++    ++ I+   +E    ++       +K     
Sbjct: 243 NPNMFRFTLTFNVLLIIVLGGMGSITGTVISSFIVTAGLEYLRFLDESINLGFIK-MEGV 301

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                 +    L +V++   + L+  +  S
Sbjct: 302 AGIRMVVFSTLLMIVVIFFRNGLMGNKEFS 331


>gi|260425357|ref|ZP_05779337.1| inner-membrane translocator [Citreicella sp. SE45]
 gi|260423297|gb|EEX16547.1| inner-membrane translocator [Citreicella sp. SE45]
          Length = 358

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 82/329 (24%), Positives = 144/329 (43%), Gaps = 13/329 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +L  V     ++    T S+    ++ I ILIY + A GL+++ G  G LSL       
Sbjct: 26  AVLLAVILAFAWVIFPLTASEFTFQTLLIPILIYSLAALGLNLLTGYAGQLSLGTAAFMG 85

Query: 76  IGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           +GAY+   ++     L+  + I  S + S   G+  G+PSL+ +G YLAIATL       
Sbjct: 86  VGAYACYKMVTLMPWLNPIVAILFSGVFSAGVGVAFGIPSLRIKGFYLAIATLAAQFFLV 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  KW  + N                 V +L  F  + +      I  Y+V+LG+  L 
Sbjct: 146 WLFEKWGWLYNYN---------ASGAIQVPNLEIFGVYVAGPQASSIVQYFVVLGVVTLL 196

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASR 253
             + + L R  +   W+  RD   A   +   ++ +KL+AFAVSS  +G+AGA F    R
Sbjct: 197 TVVCINLTRGNLGRTWKATRDMDIAAELIGINLMRSKLTAFAVSSYVVGVAGALFVFMWR 256

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
               P++F    +  ++ I I+GG+ S+        +++G+  L   +       +    
Sbjct: 257 GAAEPNLFDIPLSFRILFIAIIGGLGSVLGNYLGAILIVGLPVLLNTLPEAL--GIPISS 314

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +    +  ++   +   +++  H L RL
Sbjct: 315 ATVEHLNIMIVGSLIVFFLIIEPHGLARL 343


>gi|223938439|ref|ZP_03630332.1| inner-membrane translocator [bacterium Ellin514]
 gi|223892858|gb|EEF59326.1| inner-membrane translocator [bacterium Ellin514]
          Length = 325

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 59/329 (17%), Positives = 120/329 (36%), Gaps = 25/329 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +L     L   + L + +   Y   +   + I V+ A  L++V G  G  SL      A
Sbjct: 7   IVLLTAIALSAVVALFSNQIDPYFLLVVTNVGINVILAVSLNLVNGYTGQFSLGHAGFMA 66

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY+   +    G  ++  +    + + A   +  L +         +   I S   + 
Sbjct: 67  VGAYTASAITLFMGPRLFTALGSQGIPAVAGLFLFALIAGGLVAALAGLIVGIPSLRLKG 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             +    +  G            +    R++           I     ++   G+  ++ 
Sbjct: 127 DYLAIVTLGFG----------EIIRVIFRNIEVLGGALGLNGIPSYTNFFWTFGVVAITT 176

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +++ +  +     +  + D++ A  ++       K+ AF V + F G+AG  FA S   
Sbjct: 177 YVVVSMVNSTYGRGFLAVHDDEVAAEAMGINTTRYKIIAFVVGAFFAGVAGGLFAHSTRS 236

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           I P  F F ++I ++ +VILGGM +   +  A  +L  + E    +  Y           
Sbjct: 237 IDPRGFDFMKSIEIVVMVILGGMGNTVGVIIAAVLLTLLPEFLRPIAEY----------- 285

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                  +  + L +++L R   L  +R 
Sbjct: 286 ----RMMIYSLLLIVLMLARPQGLFTIRR 310


>gi|114707754|ref|ZP_01440648.1| ABC transporter ATP-binding/permease protein [Fulvimarina pelagi
           HTCC2506]
 gi|114536743|gb|EAU39873.1| ABC transporter ATP-binding/permease protein [Fulvimarina pelagi
           HTCC2506]
          Length = 584

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 50/326 (15%), Positives = 105/326 (32%), Gaps = 39/326 (11%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
              L  + +      +Y+ ++ I+ L   + A  + +V G  G+L+      + IGAY+ 
Sbjct: 3   LIALTTVMIAPYFLDRYLVNVLIRALFLAVLAITVDLVWGFAGILTFGQSAFFGIGAYAC 62

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLP-----SLKFRGDYLAIATLIMSEIFQNI 136
            ++ + YG   +       +   A  +   L             Y +I TL +  +   I
Sbjct: 63  ALVATHYGFGPYWFFGAFLIGLAAAALTAWLVGVLSFYHGASPLYSSIITLALPIVLVQI 122

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           +      T   +GI      Y+   T                     + +   M  +   
Sbjct: 123 IFAGGRFTGSSSGISGFPTYYWAVETW--------------------FVIAGVMLVVIGC 162

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
                 R+ +      IR+N+     L   +   K++ F    +    AG  +AA  + +
Sbjct: 163 FAWLFVRSDLGRILVAIRENEDRCAYLGIPVSRIKIALFTACGSIGAAAGFGYAAFTNVV 222

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +P++  F      +  V LGG  +L         +        G   + +          
Sbjct: 223 APELGGFLLGTESLIWVALGGRGTLIGPIFGAIGIDVTSSYLSGTLPFLWK--------- 273

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
                 ++ +   +VI++  +    L
Sbjct: 274 -----FIVGVLFVIVIVLLPNGFASL 294


>gi|163736020|ref|ZP_02143445.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
 gi|161390687|gb|EDQ15031.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
          Length = 358

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 80/344 (23%), Positives = 149/344 (43%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F +R ++Y   + L       +  + +    +  +++S+ +  LIY + A GL+I+VG  
Sbjct: 20  FPIRFDRYRYYVVL------FIAIVVIPFMVNDYWVNSIFMPFLIYSIAAIGLNILVGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +   +S+++ + ++  I+ A G++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKLMTAFPDVSMFIHVLLAGAITAAVGVLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N                       F    +        
Sbjct: 134 AVATLAAQFFLVWMFNRVSWFYNYS---------ASGQINAPERDTFGIIITGPNTDAWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L      A I   L R A+   W  IRD   A   +    + AKL+AFAVSS F+
Sbjct: 185 AYVFCLIFTIACAVIARNLTRGAMGRQWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFV 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F A         ++F  +++ +V+ ++I+GG+ S+       A L+ +  L   
Sbjct: 245 GISGALFFAIYLGAVEVGEVFGITKSFLVLFMIIIGGLGSIFGSFAGAAFLVLLPVLLKV 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +   +F             +  ++   + L +++  H L +L  
Sbjct: 305 IGVDWFGWPTDI---VAHLNLVVVGALIILFLIVEPHGLAQLWR 345


>gi|115523026|ref|YP_779937.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115516973|gb|ABJ04957.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 314

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 81/346 (23%), Positives = 143/346 (41%), Gaps = 35/346 (10%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
            RL +   IL  LA+V  +L   F        Y   +   + +    A GL+I++G  G 
Sbjct: 3   TRLGRRPVILLSLALVIAVLPLAFP-----SSYYFRVASLVWVSAFAAIGLNILMGKAGQ 57

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           +SL     + IGAY+  IL +  GL     + V A +S     ++G P L+ +G YLAIA
Sbjct: 58  VSLGHAGFFGIGAYAVAILPTHVGLHSLAAVLVGAALSALLAFLVGRPILRLKGHYLAIA 117

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL +  +   ++      T G  G+ VA  + F      S +                Y+
Sbjct: 118 TLGLGVLIAMVITTESGFTGGPDGMPVAKLVLFGWRASGSDVW---------------YW 162

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +  GM  L   I L L  T    A+R + D++ A       +   KL AF +++ +  +A
Sbjct: 163 ITGGMLLLGTWIALNLDDTPTGRAFRALHDSETAARVAGIHVNRFKLQAFVIAAVYGSLA 222

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G+  A     ++PD   F  ++ ++++V+LGG+ S+       A+LI + +L      Y 
Sbjct: 223 GSALAMMNGFVNPDQAGFLHSVELVTMVVLGGLGSIVGSIVGAAVLIVLPQLLTVFQEY- 281

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                            ++ + + L ++     ++ +        R
Sbjct: 282 --------------EHFMLGLLIILSMIFMRDGMVPMVRKLLARAR 313


>gi|91788847|ref|YP_549799.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91698072|gb|ABE44901.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas sp. JS666]
          Length = 340

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 57/322 (17%), Positives = 120/322 (37%), Gaps = 15/322 (4%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 ++   M  +++I  +FA  L ++ G  GL+SL     + I  Y+   L  +   
Sbjct: 29  FPFAGTEFYTQMVTRMMIMAIFAMSLDLLQGVTGLVSLGHAAFFGIAGYALAFLTPQGEP 88

Query: 91  S-IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
             +W  +PV+ + SG   +++G   ++  G Y  + T+  +++   +    K +      
Sbjct: 89  VSLWWTLPVAVLASGLAALVIGFFVVRTHGIYFIMVTMAFAQMVFYLFFDNKVLGGSDG- 147

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                    L    +     F +    +  +  +YY  LG+     + +  L  +    A
Sbjct: 148 ---------LYINFKPSAELFGWTPFDLDGKRTLYYFTLGVLLAVYAFLRRLLWSPFGRA 198

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              IR N+    ++       KL+AF ++ +  G+AG  + A    I+P++  F  +   
Sbjct: 199 LAGIRVNEHRMRAMGYGTFGYKLAAFTLAGSLAGLAGYLWGAQTGYINPELMGFHMSAHA 258

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           I +VILGGM + +           ++ +   +        +             M + + 
Sbjct: 259 IMMVILGGMGNFAGAIVGAFAFEYLLHVFKDLPTLEVLGSVNLG----KHWQLWMGLFIV 314

Query: 330 LVILMRSHSLLRLRTPSNFLER 351
            V++     LL L       + 
Sbjct: 315 AVVVFAPRGLLGLAQKFMKRKE 336


>gi|239905226|ref|YP_002951965.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
 gi|239795090|dbj|BAH74079.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
          Length = 345

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 80/358 (22%), Positives = 137/358 (38%), Gaps = 45/358 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + +   I+  L  V  L  FL+L       Y   +   I I ++ A  L+++ G  GL S
Sbjct: 1   MRRGQTIILNLVAVLALGGFLWLAEGNFDGYKIQILNLIAINIILALSLNLIYGFTGLFS 60

Query: 68  LNCVIAYAIGAYSYVI-------------------LGSRYGLSIWLLIPVSAMISGACGM 108
           L      AIGAY   I                             + +    +++ A G 
Sbjct: 61  LGHAGFMAIGAYICSILIMTPDQKDMLFLLEPAYDWVQNAHAPFLVAVLAGGLVAAAIGA 120

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
           ++G P L+   DYL IATL  +EI + +   +  +TNG  G                   
Sbjct: 121 LVGFPLLRLGDDYLGIATLGFAEIIRVLANNFPRLTNGALGFKGIP-------------- 166

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                      +    +   G C ++  +I+ L ++   N  + IRD++ A  ++   + 
Sbjct: 167 -----------DYANLWWNFGWCLVTLYVIVRLLKSNTGNVLKAIRDDEAAARAMGVNVF 215

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
             KL +F V + F G+ GA  A+    I P MF F+    ++ IV+ GG+ SLS    A 
Sbjct: 216 RYKLLSFTVGAFFAGIGGALLASLLTTIDPKMFLFTLTFNILMIVVAGGLGSLSGTVMAG 275

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
             +  ++E    +         +           +  +AL ++IL R   L+ +R   
Sbjct: 276 IGITVLLEWLRVVENPVDIFGYELP-GVPGMRMVVFSLALIMIILFRREGLMGMRELH 332


>gi|325847035|ref|ZP_08169861.1| branched-chain amino acid ABC transporter, permease protein
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481007|gb|EGC84052.1| branched-chain amino acid ABC transporter, permease protein
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 322

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 71/336 (21%), Positives = 140/336 (41%), Gaps = 45/336 (13%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +L ++   ++ + +       Y  S+   + I ++ +  L+I VG+LG ++L      +
Sbjct: 13  FVLILISFAIIQILISVGIIDSYWQSIIFLLCINIILSISLNITVGNLGQITLGHAGFMS 72

Query: 76  IGAYSYVILG----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           IGAYS  I       +     ++ + +  + +    + +G+P L+  GDYLAI TL   E
Sbjct: 73  IGAYSAAIFLKTGLVQGIFGFFIALIIGGLFAFLFSLAIGVPVLRLNGDYLAIVTLAFGE 132

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I + ++     IT G  G+                              I  + ++  + 
Sbjct: 133 IIRVVVENL-SITGGAQGMAGIP-------------------------TIDSFGLIFFVT 166

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            LS   +  +  +    A   I+DN+ A  S       +K+ AF +S+ F G+AGA +A 
Sbjct: 167 VLSVVFMYSIMTSRFGRAVLAIKDNELAAESCGINTTKSKIFAFTLSALFAGVAGAIYAQ 226

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           +   I+ ++F ++++  ++ +V+LGGM S +    +T +L  V E+      Y       
Sbjct: 227 TTGVIAANVFNYNKSFDILVMVVLGGMGSFTGSIISTIVLTVVPEILRAFAEY------- 279

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                      +  + L +V++ R   L+     S 
Sbjct: 280 --------RMIIYSVILVIVMIFRPQGLMGREEFSI 307


>gi|319946504|ref|ZP_08020740.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus australis
           ATCC 700641]
 gi|319747335|gb|EFV99592.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus australis
           ATCC 700641]
          Length = 315

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 82/340 (24%), Positives = 145/340 (42%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + +   L +    L+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNLVWLGLLIAGFALIQVLVAAGVLNLFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAYS  ILG  S    + +  + + A+I+G   +I+G+P+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYSAAILGSKSPTYGAFFGAMVLGALIAGLVALIVGVPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + +++    +TNG AGI                                   ++
Sbjct: 126 GVSEIIRILIVNGGTLTNGAAGILGLPAFTTWQ-------------------------LV 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++    +   R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+
Sbjct: 161 YLFVVITTIFTINFLRSPIGRSTLSVREDEIAAESVGINTTKVKVIAFVFGAITAAIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F+  I V+ IV+ GG+ S+S    A  +L  +  +          
Sbjct: 221 LQAGFIGSVVPKDYSFTNTINVLIIVVFGGLGSMSGTVVAAIVLGILNMVLQ-------- 272

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                   F+     +  +AL LV++ R   LL     S 
Sbjct: 273 -------DFSSVRMIIYSLALILVMIFRPGGLLGTWEFSL 305


>gi|222081679|ref|YP_002541044.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726358|gb|ACM29447.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 328

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 67/311 (21%), Positives = 123/311 (39%), Gaps = 25/311 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                +Y+    I  LI+++ A GL+++VG  GLLSL     + IGAY+  +L   YG  
Sbjct: 31  PFIGSRYVTHALIIALIFMLPAHGLNLLVGYTGLLSLAQAAFFGIGAYTAGLLAVTYGTP 90

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            ++    + +++GA  + +G+P+L+ R     + TL    I Q I   W  +T G  G+ 
Sbjct: 91  FYVNAVAAGLVAGALALPLGIPALRLRSTSFVMCTLGFVIIGQAIAKNWISVTRGDMGLS 150

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              +                  S  V      YY+ L +  L+  ++  + R+       
Sbjct: 151 GIPKP----------HFALGPWSFTVSGTTNFYYLALAVGALATLVVWAIVRSPAGRNMI 200

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            IR+N+    S+       KL  F +S+ F G+ G+ +A     +SP  F+   +  ++ 
Sbjct: 201 AIRENETLAESVGIPTWRYKLIVFMISAVFAGVGGSLYAHYLTVVSPLTFQMYYSTTMLI 260

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           IV+ GG   +S     + + +G+ E                             + L ++
Sbjct: 261 IVLGGGAGMISGTVFGSLLFVGLTEALR---------------VTPELRMIAYGLCLLVL 305

Query: 332 ILMRSHSLLRL 342
           +         L
Sbjct: 306 VFWFKKGFAPL 316


>gi|110680748|ref|YP_683755.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
 gi|109456864|gb|ABG33069.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
          Length = 342

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 63/338 (18%), Positives = 115/338 (34%), Gaps = 9/338 (2%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  +       + ++  L +F  L        +  M  Q LI V F  GL I VG+ G++
Sbjct: 6   KQKRLSAWSTPILLIAILAVFTLLVTLLGDNSLARMAAQTLIRVTFVVGLWIFVGNSGIV 65

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S       A+GAY    L  R  +    L  +   ++ A   +                 
Sbjct: 66  SFGHAGYMAVGAYCSAWLTLRPQMKGMFLPDLWPFLATAEWSVFPAAV--------VSGL 117

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L       +     +      +    A                    S   +      +V
Sbjct: 118 LAAFIALLSGAAILRLSGIAASIATFAFLAIVYTVYSSWEGVTGATSSVVGLTRYADQWV 177

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            LG    +     W   +A   A R  R+++ A  +    +   +L A  VS+ F G+AG
Sbjct: 178 TLGWASATILAAAWYANSASGLALRASREDEVAADASGINMYRHRLIALVVSAFFAGVAG 237

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A F  S   ++P+ F      I ++++++GG+ SL+       +L  ++E    M     
Sbjct: 238 ALFGHSLGVLNPNSFYLGVTFITLAMLVVGGIGSLTGAVMGVLVLSIIIEALVRMERGME 297

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                F          ++ + + LV+++R   L   R 
Sbjct: 298 IGEATFALPTG-AQEIIIGVIMILVLILRPTGLTGGRE 334


>gi|259416385|ref|ZP_05740305.1| inner-membrane translocator [Silicibacter sp. TrichCH4B]
 gi|259347824|gb|EEW59601.1| inner-membrane translocator [Silicibacter sp. TrichCH4B]
          Length = 399

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 60/369 (16%), Positives = 125/369 (33%), Gaps = 36/369 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYID-------SMGIQILIYVMFAWGLSIVV 60
           L+K D  L L+     +     L    +   +         +  + +I+ +FA G +I+ 
Sbjct: 4   LDKRDTTLLLIVAGLTIFAPFLLNPFPTDSGLAQFNAGYPDLMQRFVIFGIFAIGFNILF 63

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G LS        +G+YS V +     +++   I +S +ISG   +++G  SL+  G 
Sbjct: 64  GLTGYLSFGHAAFLGVGSYSAVWMFKLLSMNVLPAIILSVIISGLFALVIGFISLRRSGI 123

Query: 121 YLAIATLIMSEIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVR 164
           Y +I TL  +++  ++                     P   G +              + 
Sbjct: 124 YFSILTLAFAQMSFSLAYSVLTPITNGETGLQLTLDDPRVLGVSATADGSIPVTNLFGME 183

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
               +      +       YY+   +   +  + + + R+      R ++ NQ+      
Sbjct: 184 MRSTYHLIVGPWDFQFNMGYYLCALVMIAAFYLSIRIFRSPFGMMLRAVKSNQQRMNYTG 243

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                  L+AF +S  + G+AG   A+       +  +++ +  V+ + ILGG  +L   
Sbjct: 244 LNSKPYTLAAFVISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLMTILGGAGTLIGP 303

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM-------------VIALFLV 331
                 +     +   +N    +    F           +              I   LV
Sbjct: 304 VLGAGFIKYFENIFSKINDNVLHGWFSFLPDGLEDFVVFIIHPFIGKGWHLTLGILFMLV 363

Query: 332 ILMRSHSLL 340
           ++     L+
Sbjct: 364 VIYLPGGLV 372


>gi|289523480|ref|ZP_06440334.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503172|gb|EFD24336.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 348

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 56/339 (16%), Positives = 121/339 (35%), Gaps = 7/339 (2%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           ++    ++  +  V    +FL+        Y   +   I I  + A GL+++ G  G+ S
Sbjct: 2   MSSRRNLILNILAVLCFGMFLWWAEGHLSGYQIQIMNLIAINTILALGLNLIYGFGGMFS 61

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      AIGAY+  +L          +I +   +     ++     +         A  
Sbjct: 62  LGHAGFMAIGAYTCALLILPPLQK--EMIFILQPLRWPFSVLHAPFLVAVVLGGAMAAVF 119

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +      + +    +     G     R+        +                + Y  L
Sbjct: 120 GILVGIPILRLGGDYLGIATLGFAEIVRVVANNIPSITNGALGLKGIPPYANIWWNYGFL 179

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L + +        +  +   N  + IRD++ A  ++   +   K+  FA+ +   G+ GA
Sbjct: 180 LVVLYSMV----RVVNSNYGNVLKAIRDDEMAAKAMGIDVFRYKIQVFAMGTFLAGIGGA 235

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A+    I P M+ F+    V+ +V+ GG+ S++    A+AI+  ++E    +      
Sbjct: 236 LQASFITTIDPRMYMFTMTFNVLMMVVAGGLGSITGTCIASAIITILLEWLRIVESPMDF 295

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
             +            +  +AL  +IL R   ++ ++  +
Sbjct: 296 GPVHIP-GIPGMRMVIFSLALIFIILFRREGIMGMKELT 333


>gi|119716072|ref|YP_923037.1| inner-membrane translocator [Nocardioides sp. JS614]
 gi|119536733|gb|ABL81350.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Nocardioides sp. JS614]
          Length = 350

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 70/325 (21%), Positives = 139/325 (42%), Gaps = 29/325 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            + A    L++  FL    +Q Y   +   IL++ +FA GL++++G  GLLS      + 
Sbjct: 9   VIRAAFVGLVVLAFLLPNLTQPYTIRVAATILVFTVFATGLNLILGFAGLLSFGHAAMFG 68

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            GAY    L    G+ +  ++ +S + S   G+++GL S +  GDYLA+ TL + +IF  
Sbjct: 69  AGAYISARLLLDTGMPLLAVMVISVLGSAVFGLLVGLTSWRVGGDYLALITLGVGQIFYL 128

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L   K +T G  G+       F G                +     +Y  +L +  ++ 
Sbjct: 129 YLNNAKEVTGGATGLPGIPAGNFFGWD--------------LALIENIYLFILVVTIVTT 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    + R+ +  A+  IR+++    +    +   K+  F + S   G+AG         
Sbjct: 175 AFAWLIGRSFLGRAFLAIREDEVIARAHGINVPLTKVIGFGIGSGIAGLAGVLQVLLLGF 234

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           + P  F   ++I+++ +V++GGM + +     + ++IG  E    +  Y           
Sbjct: 235 VGPATFNVDQSILIVEVVLIGGMATTAGPLLGSLLVIGSTEYLRALADY----------- 283

Query: 316 FNMRHTTLMVIALFLVILMRSHSLL 340
                + +    + +V+L +   L+
Sbjct: 284 ----RSMIFGALILIVLLWKPGGLV 304


>gi|326333808|ref|ZP_08200041.1| sugar ABC transport system [Nocardioidaceae bacterium Broad-1]
 gi|325948390|gb|EGD40497.1| sugar ABC transport system [Nocardioidaceae bacterium Broad-1]
          Length = 339

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 66/283 (23%), Positives = 116/283 (40%), Gaps = 15/283 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L+A    L L L   A     +I S+G+ I  Y   A   + V G  G +SL       +
Sbjct: 4   LVAAAVGLALILAFPALAPDPFILSVGVVIASYAALAVAWNFVGGLTGYISLGHAAYSGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G Y   +L +  G++ WL + V+A++ G   + +G+ SL+ RG    I ++ +  I   +
Sbjct: 64  GGYGTALLITEAGVNPWLSMVVAAVLVGVAAVPIGIASLRVRGASFVIVSIALVLILLLV 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
              W  +T G  G+ V               RF              +Y+ +G+  ++ +
Sbjct: 124 AQSWAGVTGGSNGLRVPRPFGTDVLRPEQHERF--------------FYLFVGLTLIALA 169

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +   + R+ +    + IR+++    +L       KL  F VS+ F  MAG  +A     +
Sbjct: 170 LWWVIDRSRLGTGLKAIREDEDKAQALGVPTFAYKLVVFVVSAFFTAMAGGMYALWFGSL 229

Query: 257 SP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
            P   F       ++ + +LGG+ SL        I+   VE  
Sbjct: 230 DPIFQFSILTGSYLVLMSLLGGVRSLLGPVVGAVIVGYAVEFF 272


>gi|317122615|ref|YP_004102618.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Thermaerobacter marianensis DSM 12885]
 gi|315592595|gb|ADU51891.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Thermaerobacter marianensis DSM 12885]
          Length = 346

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 60/305 (19%), Positives = 119/305 (39%), Gaps = 27/305 (8%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y   +  ++L++ +FA  L +++G  GL+SL     +  G Y+  +L    GL+ W  + 
Sbjct: 36  YGLGLLTEMLVFGVFAMSLDLLIGHAGLVSLGHAAFFGAGGYAAGLLARHLGLTSWPGLV 95

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
              +       +     L+  G Y  + TL + ++   ++  W+P+T G  G+    R  
Sbjct: 96  AGILAGVLLAALFAPVVLRASGAYFLMLTLALGQLLYGMVWLWRPVTGGDDGLPGLPRPE 155

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                              +   +  YY  L    ++A  + WL  +      R IRDN+
Sbjct: 156 LP------------LLGGILWDNVAFYYFTLVCTGVAALSMAWLVTSPFGLTLRGIRDNE 203

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               SL       K + + +++ + G+AG  +A     +SP    ++ +   + +VILGG
Sbjct: 204 LRLESLGYHTWLYKYAIYVIAAGYAGLAGTLYAYYAGYVSPHNLSWALSGEAMVMVILGG 263

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
             +L   A   A+++ +  +       +                 ++ +   L +L   H
Sbjct: 264 AGTLWGPALGAALVLVLKYVVSSFTDRWLA---------------ILGLTFVLTVLFAPH 308

Query: 338 SLLRL 342
            L  L
Sbjct: 309 GLAGL 313


>gi|239629298|ref|ZP_04672329.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|239527984|gb|EEQ66985.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
          Length = 312

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 78/344 (22%), Positives = 144/344 (41%), Gaps = 43/344 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   I     +   +L+ +         +I++  + I I ++ A GL++++G  G  SL 
Sbjct: 2   RSKLIWLATMIAGFVLIDIGELTGVINGFIENALVTIGINIILAVGLNLIIGFSGQFSLG 61

Query: 70  CVIAYAIGAYSYVILGSR--YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+       L  +L + V  +++    +I+G+P+L+ RGDYLAIAT+
Sbjct: 62  HAGFMAIGAYATAIITQNISTPLGFYLAMLVGMIVAIIAALIVGIPTLRLRGDYLAIATM 121

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +EI + I+     ITNG AG++    L    T                         +
Sbjct: 122 GAAEIIRVIINNL-KITNGPAGMFNIPPLASWPT-------------------------V 155

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  ++  I++    +    A   IRD+  A  S+       KL+AF + +A   + G+
Sbjct: 156 YILMCVTTVIVVNFIHSRAGRAVMAIRDDDIAAESIGINPTKWKLAAFVLGAATAAIGGS 215

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A+    I+P  F    +I ++ IV+LGG+ S++    A  +L  +  +          
Sbjct: 216 LHASYLQTIAPGDFGIMNSIALLIIVVLGGVGSITGTFVAAVVLGIIDTVLQNF------ 269

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                          +  +AL L+++ +   LL     S   +R
Sbjct: 270 ---------GTLRMVIYALALILLMVFKPAGLLGHYELSFKRKR 304


>gi|91224787|ref|ZP_01260047.1| putative high-affinity branched-chain amino acid transport permease
           protein [Vibrio alginolyticus 12G01]
 gi|91190333|gb|EAS76602.1| putative high-affinity branched-chain amino acid transport permease
           protein [Vibrio alginolyticus 12G01]
          Length = 355

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 61/322 (18%), Positives = 126/322 (39%), Gaps = 17/322 (5%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +    ++ +         Y  ++ IQI    + A GL+I+VG  G +SL     +  GA+
Sbjct: 31  LAIAGVIAMLAAPLVLDIYFLNLFIQIAYLGIAALGLNILVGFTGQISLGHGAFFGFGAF 90

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +   L +++ + +   IP++  ++   GM+ GLP+ + +G YLAIATL    I ++   +
Sbjct: 91  ASAWLNNQFNIPVVFAIPLAGYLTMIVGMLFGLPAARIKGLYLAIATLAAQFILEDFFAR 150

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
               + G  G        F                         +Y+ L           
Sbjct: 151 ADWFSGGSYGASANPINLFGFAFTTDE---------------SFFYIALFALIFMYMWAS 195

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L R+    A+ ++RD+  +   +   +   +L +F V + + G+ GA +      +S +
Sbjct: 196 NLIRSRDGRAFVSVRDHYLSAEIMGINLTKYRLLSFGVCAFYAGIGGALYGHYLGFVSAE 255

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG--MNFYYFNSLLKFDCSFN 317
            F    +I  ++++I+GG+ S+      T  ++ + E+          F     F     
Sbjct: 256 GFTIMMSIQFLAMIIIGGLGSVKGTLMGTIFIVLLPEVLEFGVTGLSAFGDTTAFTDGLA 315

Query: 318 MRHTTLMVIALFLVILMRSHSL 339
                 + + + L ++     L
Sbjct: 316 YFKEMAIGLVIMLFLIFEPQGL 337


>gi|302344562|ref|YP_003809091.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075]
 gi|301641175|gb|ADK86497.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075]
          Length = 368

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 64/362 (17%), Positives = 130/362 (35%), Gaps = 45/362 (12%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
              L++   +   L         L+L     Q ++  M     IY   A   +++ G  G
Sbjct: 15  PRSLSRRRDVALTLLAGLAGAAALWLVERHGQPFVVHMLTLAAIYATLAVSYNLINGVAG 74

Query: 65  LLSLNCVIAYAIGAYSYVILGSRY-------------------GLSIWLLIPVSAMISGA 105
             SL      A GAY   +L                        L +   + ++  ++ A
Sbjct: 75  QFSLEPNAFVACGAYVTALLTMTPDEKAMTFILEPLIWPFADICLPLPAALLIAGCLTVA 134

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
               MG P  + RGDYLAI TL   E+ + +    + +TNG  G+   +R          
Sbjct: 135 LAFAMGFPVFRVRGDYLAIVTLGFGEVIRVVAENAQGLTNGPLGLKGIERQTN------- 187

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                              +   G+  ++  ++  L  ++   A + +R+++ A  ++  
Sbjct: 188 ------------------LWWSWGLLAVTLIVVGRLVNSSYGRAMKAVREDESAAAAMGV 229

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
            + + K+ AF  S+ F G+AG   A     I+P  F F     ++ I++ GG+ S +   
Sbjct: 230 NVFWHKMLAFCTSAFFEGVAGGLLAHLLTAINPRQFDFLFTFTLLIIIVAGGLGSTTGAV 289

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFD-CSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
               ++    E    ++  +   L+ +   +       +  + L  +++     ++    
Sbjct: 290 LGAFLVTFGAEYLRFVDQSFTIPLIDYAVPATPGLRMVIFSLLLVGLMIFARRGIMGRAE 349

Query: 345 PS 346
            S
Sbjct: 350 FS 351


>gi|254462914|ref|ZP_05076330.1| inner-membrane translocator [Rhodobacterales bacterium HTCC2083]
 gi|206679503|gb|EDZ43990.1| inner-membrane translocator [Rhodobacteraceae bacterium HTCC2083]
          Length = 402

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 52/346 (15%), Positives = 119/346 (34%), Gaps = 30/346 (8%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
                 +  + +I+ +FA G +I+ G  G LS        +G+YS V +     +++   
Sbjct: 39  NAGYPDLMQRFVIFGIFAIGFNILFGLTGYLSFGHAAFLGVGSYSAVWMFKLLSMNVIPA 98

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK---------------- 139
           I +S +++G   +++G  SL+  G Y +I TL  +++  N+                   
Sbjct: 99  IALSVVVAGLFSLLIGYVSLRRSGIYFSILTLAFAQMSFNLAYSVLTPITNGETGLQLTL 158

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
             P   G +              +     +     ++       YY+      ++  + +
Sbjct: 159 NDPRVLGISQTADGSIPVTGLFGLEMRSTYTMDVGAWAFQFNVGYYLCAVALLVAFYLAI 218

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            + R+      R ++ NQ+             L+AF +S  + G+AG   A+       +
Sbjct: 219 RIFRSPFGLMLRAVKSNQQRMNYTGLNTRPYTLAAFVISGMYAGLAGGLMASMDPLAGAE 278

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS---- 315
             +++ +  V+ + ILGG  +L         +     +   +N    +    F       
Sbjct: 279 RMQWTASGEVVLMTILGGAGTLIGPVLGAGFIKYFENIFSKINDNVLHGWFSFMPDGLEN 338

Query: 316 ---------FNMRHTTLMVIALFLVILMRSHSLL-RLRTPSNFLER 351
                            + +   +V++     L+   +  +   +R
Sbjct: 339 FVITIIHPFIGKGWHLTLGLLFMMVVIFLPGGLVEGGQRIAALFKR 384


>gi|91780288|ref|YP_555495.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91692948|gb|ABE36145.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 328

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 67/307 (21%), Positives = 130/307 (42%), Gaps = 27/307 (8%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            +Y+  +G+  L Y + A   ++V G +G  SL       IGAY+  IL +R+G  +W  
Sbjct: 24  DQYLIHLGVLTLFYAVLATSFNLVTGYVGEFSLGHTAFLGIGAYTAAILSTRFGFPMWCT 83

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +P++ ++S   G+ +G  +L+ +G +  I TL  SE  + +   W  +TNG  GI    +
Sbjct: 84  VPLAGLVSMIGGLAIGAITLRLQGPFFVIVTLAFSEALRLVADNWVAVTNGPMGIAGVPQ 143

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
             ++                 V      +Y++LG+  ++  +      +++  A  T+R+
Sbjct: 144 PEWITR------------LGNVHATQVFFYIVLGIAIVALYLAYRFVYSSVGRAAVTVRE 191

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N+    S+        + AF + +   G+AG F+A     +  D+F F     +I +V++
Sbjct: 192 NRYVAQSVGIWPFAMAMQAFVLGATLAGVAGGFYAHYISFVGSDVFGFPFMATMIIMVLV 251

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  +L        ++  + E                         TL  + + L++L  
Sbjct: 252 GGKGTLLGPLAGALLVTLLQEYLR---------------EAQELRLTLFGLFVILIVLFL 296

Query: 336 SHSLLRL 342
              L+ L
Sbjct: 297 PRGLMGL 303


>gi|90421640|ref|YP_530010.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90103654|gb|ABD85691.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 327

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 64/311 (20%), Positives = 118/311 (37%), Gaps = 29/311 (9%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
           F+       Y+ ++    +IY +F  GL+  +G  G  S        IG Y   IL  +Y
Sbjct: 30  FVAVLIYGGYLLTVMQLAMIYGIFCLGLNFFMGYTGQASFGQNAFACIGGYGSAILSVQY 89

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
                L +  S  ++G   +++G P+L+ RG YLA+AT  +  I  +I ++W  +T G  
Sbjct: 90  NWEPGLALLASMAVAGVAALLIGYPTLRLRGHYLAMATFALGLITYDITVQWTSLTQGYM 149

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G      L     TV             +++              +  I   LR +    
Sbjct: 150 GYAGIPPLGVGSFTVEDERMKLICLGLLLLF--------------AFWISQRLRDSRFGR 195

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
             R I  ++    +L   I   KL AF +++ +   AG+ FA +   ISP++F     I+
Sbjct: 196 GLRAIAGSEDGASALGIRISRFKLIAFVIAALYASAAGSLFAHTVGFISPEVFGPQMVIV 255

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
             +++ +GG+ ++        +   + EL                            + L
Sbjct: 256 TFTMLYVGGVGTMIGPVIGAIVASLLPELFRS---------------TGRFQDIAYALVL 300

Query: 329 FLVILMRSHSL 339
            ++++     L
Sbjct: 301 LVMLIYAPKGL 311


>gi|315927979|gb|EFV07301.1| branched-chain amino acid transport system / permease component
           family protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 349

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 72/341 (21%), Positives = 127/341 (37%), Gaps = 47/341 (13%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-------- 83
                 Y  ++  QI I+++ A   +++ G  G  SL      AIGAY+  +        
Sbjct: 23  PYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIGAYAAALVLLSADAK 82

Query: 84  ------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                       + + +  S  L + V+ + S    +I+     + RGDYLAI TL    
Sbjct: 83  NDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGI 142

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +   I +  ITNG  G+    +                             Y   G+ 
Sbjct: 143 IIKIAAINFPSITNGSRGLVDIPQFS-------------------------TIYWTGGIA 177

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            ++  +IL +  +    A + IRD++ A  ++     + K  AF+ S+   G+ G   A 
Sbjct: 178 IVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFSTSAFLEGVGGGLLAC 237

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN--SL 309
               +SP  F F     ++ I++LGG+ S +       ++IG  E    ++       SL
Sbjct: 238 LLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEWLRFLDELNIKIDSL 297

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                S       +  I L LV+L     ++     S+ + 
Sbjct: 298 NLDIQSTPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 338


>gi|84501717|ref|ZP_00999889.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
 gi|84390338|gb|EAQ02897.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
          Length = 364

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 67/322 (20%), Positives = 125/322 (38%), Gaps = 14/322 (4%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  LL  +         Y  +     LI+ +   GL + VG  G +SL      AIGAY+
Sbjct: 25  IAVLLAIMVALPFLVGDYYLAEAANTLIWALAGMGLMVAVGHTGQVSLGHAAFLAIGAYA 84

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
              L +       +  PV+ +I+G  G I+ +P+++  G YLAIATL +  I + ++I  
Sbjct: 85  DSALMNAGLP-FLVSFPVAGLITGLFGAIIAVPAVRMSGIYLAIATLAVFVIVEEMVILL 143

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           +PIT G  GI                +                Y++ L +  +       
Sbjct: 144 EPITGGVGGIMAP------------SVTILGISFDRYAALPNFYWLCLAVVAVVTWGYAN 191

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L R+    ++  +RD++ +  +L   +   +  AF +SS   G+AGA         + ++
Sbjct: 192 LMRSPTGRSFLAVRDSEVSARALGINVTRTRALAFGLSSGVTGLAGALMGHYIGFFNYEL 251

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F    +I ++ +V +GG+  +        ++  V +L   +        +          
Sbjct: 252 FSIFISINLLLVVTIGGLGFIQGAFLGAILITAVPQLISILRDNLVGIGIDLS-GIPGLD 310

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
           T +  + L   I+     L   
Sbjct: 311 TMIFSLILIGFIIYEPTGLYGR 332


>gi|239927016|ref|ZP_04683969.1| branched-chain amino acid ABC transport permease [Streptomyces
           ghanaensis ATCC 14672]
 gi|291435363|ref|ZP_06574753.1| branched-chain amino acid ABC transport permease [Streptomyces
           ghanaensis ATCC 14672]
 gi|291338258|gb|EFE65214.1| branched-chain amino acid ABC transport permease [Streptomyces
           ghanaensis ATCC 14672]
          Length = 381

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 71/347 (20%), Positives = 130/347 (37%), Gaps = 13/347 (3%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
                 L +    + LLAV   L             +   +G+  +   + A GL+++ G
Sbjct: 3   DRLPGVLTRRRASIPLLAVALCL------PPFYLDAFWLRIGLFSMAAAIGAIGLALLSG 56

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL--PSLKFRG 119
           + G LSL      A+GAY Y  L    G  +   +     +  A          + + +G
Sbjct: 57  TAGQLSLGHAFFLAVGAYGYAYLAGEPGPGLPPALAAPLAVLLAGAAGGLFSPVAGRVKG 116

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
            YL IATL +  +  ++L+    +T G  G      L   G T  +              
Sbjct: 117 IYLGIATLALVFLGHHVLLTADSVTGGFNGRS-VPPLTLGGFTFGADDPHLTVLGVPFGA 175

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
           E  ++++ LG+   +      L R+    A   +RD++ A   +   +   + +AF VSS
Sbjct: 176 EERLWFLGLGLFAFTWFTARGLLRSRPGRALAALRDSETAAAVMGVDVARHRSAAFVVSS 235

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            + G+AG F A +  R+ PD F  + ++  ++++++GG+ S++        +  +  L  
Sbjct: 236 MYAGLAGVFLALAFRRVVPDYFSLALSVDYLAMIVIGGLGSVAGATAGAVFVTALPLLMT 295

Query: 300 GMNFYY----FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                                      L   A+ LV+L     L  L
Sbjct: 296 RYADRLPLVAAPGSTDGAVGPTEAARYLYGAAIVLVLLYAPDGLHGL 342


>gi|298293202|ref|YP_003695141.1| ABC transporter [Starkeya novella DSM 506]
 gi|296929713|gb|ADH90522.1| ABC transporter related protein [Starkeya novella DSM 506]
          Length = 609

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 103/313 (32%), Gaps = 29/313 (9%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
           F+G      Y  ++  + L+Y   A  + ++ G LG+L+    + +A GAY+  ++ +  
Sbjct: 22  FVGPYVLDTYSVNVLTRSLLYAAVALTVDLLWGFLGILTFGQSVFFACGAYAAGLVFTH- 80

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
                    ++  +     +++          + A A           ++  + + +G  
Sbjct: 81  MDFTEGNALLALGLGVGGALLVAAVIGWLAFWHGASALYASVITLVLPIVATQLLYSGGT 140

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
               +  L    +   S+  +F     F++    + Y+ +              ++    
Sbjct: 141 FTGSSSGLSGFMSFDLSMEAWFWLAGGFLVVVTTLAYIFV--------------KSDAGR 186

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               +R+N++    L       K+  +   +A   +AG  +A     ++P++  F     
Sbjct: 187 LLIAVRENEQRCKYLGLDTSRLKILVYLACAAIGAVAGYIYAGYAMVVAPELAGFVFGTE 246

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           ++    LGG  +L        I+                   +    +      ++    
Sbjct: 247 LVIWTALGGRGTLLGPVFGALIV--------------DYESAQLAGDYPFVWQLIIGSLF 292

Query: 329 FLVILMRSHSLLR 341
            LVI+     LL 
Sbjct: 293 VLVIIAFPRGLLP 305


>gi|209515366|ref|ZP_03264232.1| ABC transporter related [Burkholderia sp. H160]
 gi|209504086|gb|EEA04076.1| ABC transporter related [Burkholderia sp. H160]
          Length = 883

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 53/333 (15%), Positives = 115/333 (34%), Gaps = 34/333 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V  L+L        +         QI IY ++A G + ++G LGL+       +   +
Sbjct: 30  VIVMALVLIAGSALALAIGLPIDRITQIAIYTLYAAGTNFLIGYLGLVPFGASFFFGCAS 89

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  I  + +G +    + +    S    +++G   L+ +G Y ++ TL  S+I   I  
Sbjct: 90  YALAIASAAWGGNEITGVLIGMGFSLLLALVIGALILRRKGLYFSLLTLACSQIAFEIAY 149

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           KW  +T G+ G+    R  F                      +  +   L +   +  ++
Sbjct: 150 KWTSVTGGENGMQNVARPLFPSA-------------------LSFHAFTLVVVLAATWLL 190

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +         + +RDN++   SL   +   +L A  ++   IG+AG   A     +  
Sbjct: 191 WRIAHAPFGRLMQALRDNEQRVTSLGYDVYTTRLIALIIAGGVIGVAGGLMALLLQGVYA 250

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           +   +S     + + +LGG+           + I + +    +   ++            
Sbjct: 251 NNLNWSHAGDPVLMAVLGGIHQFLGPLWGAVVFIVLEDRLSAITENWW------------ 298

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                    + ++ L+    +           R
Sbjct: 299 ---LFFAPVIIIMALLSPEGIQGFWQRFGKRPR 328


>gi|119716343|ref|YP_923308.1| inner-membrane translocator [Nocardioides sp. JS614]
 gi|119537004|gb|ABL81621.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Nocardioides sp. JS614]
          Length = 376

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 66/330 (20%), Positives = 116/330 (35%), Gaps = 20/330 (6%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              +  LLA V        L           +     IY +    L++++G  G +SL  
Sbjct: 33  RGTVWALLAWVVLAYPVNALSPFHVGVADIDIASLAAIYAIGGLSLNVLLGYCGQISLGH 92

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                IGA++   + +  GLS WL +  +A+  G   +++G  SL+  G Y A+ TL   
Sbjct: 93  QAFVGIGAFASAYIVTNLGLSFWLAVAAAAVFGGLQAVLLGAVSLRLTGLYFALVTLAYG 152

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
              Q  L     IT G+ G        F                         Y++ LG 
Sbjct: 153 TFAQETLFGITAITGGEGGKPAPRPELF-------------------ASGYRFYFLCLGF 193

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L   +   L  +    A   +R+N +   S    +    L AFAVS  F G+AG+  A
Sbjct: 194 LALVLWLDWRLTSSKAGRAMAALRENPRVAASYGIAVRSYILLAFAVSGIFAGIAGSLIA 253

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
              + I    F F   ++ + + ++GG+ +   +   +     + E       +      
Sbjct: 254 HHDEVIVGSSFDFRLALLFVLMTVVGGLRNRVGVVIGSVFFALLEEGALVSMLHLGGFFE 313

Query: 311 KFDCSFNMRHTTLMV-IALFLVILMRSHSL 339
                     + ++  I L L + +    +
Sbjct: 314 GTLGLPTEFVSLVVGPILLVLTLTLYPGGI 343


>gi|258405259|ref|YP_003198001.1| inner-membrane translocator [Desulfohalobium retbaense DSM 5692]
 gi|257797486|gb|ACV68423.1| inner-membrane translocator [Desulfohalobium retbaense DSM 5692]
          Length = 298

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 70/307 (22%), Positives = 126/307 (41%), Gaps = 37/307 (12%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL-SIWLL 95
            YI  + +   +YV+ A  L+I VG  G +SL     + IGAY   +L   Y +    LL
Sbjct: 3   AYILHLAVLGGMYVLLAASLNIPVGLSGQVSLGHGAFFGIGAYISGLLAMHYTIVPFPLL 62

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + ++ + S A  +++  P+LK + +YLA+ TL    IF+  L      T G  G+Y    
Sbjct: 63  LVLAGLGSAAVAVLLSPPALKLKDEYLAVVTLGFGLIFELGLKNLA-FTGGTDGLYGLPN 121

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
               G                        + + G   L   +   LR+         I++
Sbjct: 122 FGMQGADF--------------------LWWVWGAVTLCLFVTSRLRKGQFGRNLTAIKE 161

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++   +L    +  K+  FA+S+ F G+AG+ +A     I+P +F    +I+++ +V+L
Sbjct: 162 SERTARTLGIAPLPLKVGCFALSALFAGIAGSLYAHYITFINPGVFGLHTSILLLCMVVL 221

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM ++        +L  + EL      Y                  +    L ++++ R
Sbjct: 222 GGMGTVLGPLAGGILLFLLPELLQEFADY---------------QDLVYGGLLIVILIFR 266

Query: 336 SHSLLRL 342
              LL  
Sbjct: 267 PQGLLGR 273


>gi|170738253|ref|YP_001779513.1| ABC transporter related [Burkholderia cenocepacia MC0-3]
 gi|169820441|gb|ACA95023.1| ABC transporter related [Burkholderia cenocepacia MC0-3]
          Length = 616

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 105/336 (31%), Gaps = 29/336 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +      L  VV    + L  G      Y+ ++ IQ   + + A  + ++ G  G L
Sbjct: 21  RAPRAHAWRGLAIVVAVAAVLLVAGPFVFGSYLLNVLIQAFFFSIVAVTVDLLWGYTGYL 80

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           +      + IGAY+  ++ +  G S    +        A   +  +          +   
Sbjct: 81  TFGQSAFFGIGAYAAGLVFTHGGFSAPHALFAIGAALAATAAVAAVFGWLSFYRGASPFF 140

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
             +  +   I++    ++ G+                           +F +     Y +
Sbjct: 141 ATVMSLVLPIVLTQSLLSGGE---------------WTGSSSGLTGFETFDLSLGQWYGI 185

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
                 + A +     R+        IRDN+     L       K+     ++   G+AG
Sbjct: 186 AGAALLVVAVLAWVFVRSDGGRLLVAIRDNEARCAYLGINTSIVKIVLLVATAMIAGLAG 245

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             + A    ++P++  F     ++  V LGG  +L      + ++        G      
Sbjct: 246 FGYGAFSGVVAPELSGFLLGTQLVVWVALGGRGTLWGPVLGSVLINVATAYLSG------ 299

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   S       ++  A  +VI++    L+ L
Sbjct: 300 --------SMPFAWQLILGAAFVVVIVLLPKGLVPL 327


>gi|126464303|ref|YP_001045416.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
 gi|126106114|gb|ABN78644.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
          Length = 331

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 67/330 (20%), Positives = 128/330 (38%), Gaps = 29/330 (8%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L +      L L     A +   Y+  +     I+   A    +++G  G LSL     
Sbjct: 6   LLRVTVAAVALFLVAVTLALRLDDYLLYVVTLGAIFATLAVSFDVLLGYTGYLSLAHGAL 65

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           + +GAY+  IL + +G   W  +P + +++GA G ++ L + + RG Y A+ TL +  I 
Sbjct: 66  FGVGAYACGILTAHHGWPFWAALPAAGLVAGAAGAVIALLAFRTRGLYFAVLTLGIGLIG 125

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             + +    +T G  G                   +    +  ++   F+   L      
Sbjct: 126 HQLFLVLAGLTGGVGGFVGIPSPGRPDWVPLDQNGWNALLALALLLATFLAAQLFV---- 181

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
                    R+ +  A   +R++     +L   +  A+L+AF  S+ F G AGA FAA  
Sbjct: 182 ---------RSRLGAACLAVREDLTLAQALGIRVGQARLAAFVFSAIFTGFAGALFAAIS 232

Query: 254 DRISPDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           + ++P+ F        ++++V++GGM +L       A+L  + E     + Y        
Sbjct: 233 NFVAPESFTVLGAGFQLVALVVVGGMGTLWGPILGAALLTALPEALRVASGY-------- 284

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                        + L + ++     L  L
Sbjct: 285 -------SLIAYGVLLLVFVIFAPRGLASL 307


>gi|254477598|ref|ZP_05090984.1| inner-membrane translocator [Ruegeria sp. R11]
 gi|214031841|gb|EEB72676.1| inner-membrane translocator [Ruegeria sp. R11]
          Length = 327

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 56/310 (18%), Positives = 110/310 (35%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           AV+  LL          + ++ ++  ++ I  +   GL+I +G  GL+SL     + IG 
Sbjct: 10  AVILLLLAIPLWAHMAEEPFLITLATKVAILALAGVGLNIALGIGGLVSLGHAAFFGIGG 69

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL +       L      +       ++ L ++        +   +         I
Sbjct: 70  YAMGILAAHAQNYEPLAEWPMLIEGTNQMPVIWLVAVVASALAALVIGALSLRTSGVYFI 129

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                       +      + G    S+     FP    +  +  + +   +   +    
Sbjct: 130 MITLAFGQMLYYFAISWTAYGGEDGLSIWVRNEFPGLNTLVPLEFFLICYVILCAALWFA 189

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R     A    R  +    ++  T    +L+AF +S A  G+AGA FA     +SP
Sbjct: 190 ARLARAPFGLALSAARQCEARVETVGITPYQLRLTAFVISGAITGLAGALFADLNRFVSP 249

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            M  +  +  ++  VI+GG+  L       A+ I +  L  G++ Y+   L        +
Sbjct: 250 TMLSWHTSGEIMIFVIIGGVGRLFGPVIGAALFILLEHLLGGISDYWQIYLGGLLLIIVL 309

Query: 319 RHTTLMVIAL 328
                ++ A+
Sbjct: 310 YARGGVIGAI 319


>gi|163736524|ref|ZP_02143943.1| hypothetical protein RGBS107_15371 [Phaeobacter gallaeciensis
           BS107]
 gi|161390394|gb|EDQ14744.1| hypothetical protein RGBS107_15371 [Phaeobacter gallaeciensis
           BS107]
          Length = 327

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 57/314 (18%), Positives = 111/314 (35%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L   AV+  LL          + ++ ++  ++ I  +   GL+I +G  GL+SL     +
Sbjct: 6   LLNAAVILLLLAIPLWAHMTEEPFLITLATKVAILALAGVGLNIALGIGGLVSLGHAAFF 65

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IG Y+  IL +       L      +       ++ L ++        +   +      
Sbjct: 66  GIGGYAMGILAAHAQNYEPLAEWPLLIEGTNQMPVIWLVAVVASALAALVIGALSLRTSG 125

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              I            +      + G    S+     FP    +  +  + +   +   +
Sbjct: 126 VYFIMITLAFGQMLYYFAISWSAYGGEDGLSIWVRNEFPGMNTLAPLQFFLICYAILCAA 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L R     A    R  +    ++  T    +L+AF +S A  G+AGA FA    
Sbjct: 186 LWFAARLARAPFGLALSAARQCEARVETVGITPYQLRLTAFVISGAITGLAGALFADLNR 245

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            +SP M  +  +  ++  VI+GG+  L       A+ I +  L  G++ Y+   L     
Sbjct: 246 FVSPTMLSWHTSGEIMIFVIIGGVGRLFGPVIGAALFILLEHLLGGISDYWQIYLGGLLL 305

Query: 315 SFNMRHTTLMVIAL 328
              +     ++ A+
Sbjct: 306 IIVLYARGGVIGAI 319


>gi|159037419|ref|YP_001536672.1| inner-membrane translocator [Salinispora arenicola CNS-205]
 gi|157916254|gb|ABV97681.1| inner-membrane translocator [Salinispora arenicola CNS-205]
          Length = 338

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 56/321 (17%), Positives = 121/321 (37%), Gaps = 29/321 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L++ L +          ++ + IL + +FA  + +++G  GLLS      + + AY  
Sbjct: 33  ALLVVGLAVALWLPNGLYPAVAVDILCWALFAVAVDLLLGFTGLLSFGHAAFWGVSAYVT 92

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            ++    GL     +   A  +    + +G  +++  G Y A+ TL  +++   +  +W+
Sbjct: 93  GLVAIHLGLPFPAAVLAGAFAAAVLAVPIGYLAVRRTGIYFAMVTLAFAQLVYYVANEWR 152

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G+ G+    R                     +  + + YY +L +  L  +    +
Sbjct: 153 SVTQGENGLQGVPRE---------------LFGLDLTDDYYFYYAILPIVLLGLAGAWRI 197

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +        IRDN     +L   +   KL+ F +S    G+ G  FA S   +S ++ 
Sbjct: 198 VHSPFGRVLVGIRDNPARARALGYPVHRYKLTIFVLSGFVAGLGGGLFAVSHRFVSLEVL 257

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            ++ +   + +V+LGG+ +L        I++ + +      F                  
Sbjct: 258 HWTTSGKAVIVVVLGGIGTLWGGVLGAGIVVRLEDWLSFSGFEAIG-------------- 303

Query: 322 TLMVIALFLVILMRSHSLLRL 342
            +      LV+L+    +   
Sbjct: 304 LVTGGLFVLVVLLFRRGIWGT 324


>gi|170701815|ref|ZP_02892747.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
 gi|170133265|gb|EDT01661.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
          Length = 603

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 72/324 (22%), Positives = 130/324 (40%), Gaps = 33/324 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V  ++    L    +  Y+        +Y + A  L++V G++G +SL       IGA
Sbjct: 312 VLVVLIVAAAVLPWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGA 371

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L S  G S  + IP + +I+   G ++  P+ + RG Y++IATL + E+   +++
Sbjct: 372 YASALLSSDLGWSPAVTIPCAGVITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVIL 431

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  +T G  GI     L +                         Y+    +  + A + 
Sbjct: 432 NWDGLTRGPLGITGIAPLPW------------------ATTARAAYWFTFAVLVVFALVQ 473

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L R+ +    R +R++  A  +        K  AFAV     G++G   A     I+ 
Sbjct: 474 VRLLRSHLGRTLRAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINH 533

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F    +I+ +++VILGG+ ++         LIG+ EL      Y              
Sbjct: 534 QTFDSQVSILALTMVILGGLGNVLGGIAGAIALIGLPELFRWAADY-------------- 579

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
               +  + L L++  R   LL  
Sbjct: 580 -RMLIYGVVLLLLVRFRPQGLLGT 602



 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 106/305 (34%), Gaps = 25/305 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  I   IY + A GL+++ G   L++      Y +GA+   +  +R GL + + +
Sbjct: 6   DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRLGLPLPVAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +  GA G+ +    L+       IA L+ +     IL +   +  G     V   L
Sbjct: 66  AAVVIGCGALGVAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             +          +       +A +  +LR T +  A R    +
Sbjct: 126 PDWH-----------LRIAGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +     + FA++ A  G++G       + I P M  F   +  +  +++G
Sbjct: 175 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++      + +L  V      +    +  L  F               L + ++ R 
Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280

Query: 337 HSLLR 341
           + L  
Sbjct: 281 NGLFS 285


>gi|83950606|ref|ZP_00959339.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
 gi|83838505|gb|EAP77801.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
          Length = 358

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 79/344 (22%), Positives = 143/344 (41%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ ++Y     L+      + F F+    +  +++++ +  LIY + A GL+I+ G  
Sbjct: 20  FPIKFDRYRYYAVLI------IGFAFIPFVINDYWVNAIFLPFLIYSIAAIGLNILTGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +   +SI + + ++  I+   G++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKLMTAFPEVSILIHVLLAGGITAGVGVLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N                       F    +        
Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGQINAPERTMFGVPVTGPETAAWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L +    A I   L R  +   W  IRD   A   +    + AKLSAFAVSS F+
Sbjct: 185 AYLFCLVLTVFCALIARNLTRGMMGRKWMAIRDMDIAAEIIGVNPLMAKLSAFAVSSFFV 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G+AGA F A         + F  +++ +V+ +VI+GG+ S+       A L+ +  +   
Sbjct: 245 GVAGALFFAVYLGAVEVGEAFGITKSFLVLFMVIIGGLGSIFGSFAGAAFLVLLPVVLKL 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +                     ++   + L +++  H L +L  
Sbjct: 305 VGVDLLGWPTDL---VAHLQLIIVGALIVLFLIVEPHGLAQLWR 345


>gi|319792784|ref|YP_004154424.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315595247|gb|ADU36313.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 345

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 74/322 (22%), Positives = 133/322 (41%), Gaps = 17/322 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +      L L    +  Y   +   + I V  A GL+I+ G  GL+SL       +GA
Sbjct: 24  MWLAIGAALLVLFPFMASDYWLYLACLVAINVASATGLNILTGYTGLVSLGQAAFMGLGA 83

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  I+ +R G    L I    +++   G+I+G+PSL+ +G YLAIAT+  S I   +  
Sbjct: 84  YTVAIMQTRLGTPFLLNIAAGGVVAMLGGLIVGIPSLRVKGLYLAIATIAASFITHFLFA 143

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +T G  GI +                        +     +Y+V++ +  L     
Sbjct: 144 NL-KLTGGTTGISLPPAQ---------------LFGLPLDTSFRLYWVIVPVMLLMVLGA 187

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L RT +  A+  IRD   +   L   ++  KL +F +SS + G+AG  +A     ++P
Sbjct: 188 ANLFRTRVGRAFIAIRDRDISAEVLGIPLLRYKLLSFGLSSFYAGVAGGLWAYFFRVVTP 247

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F    +I  ++ +I+GGM ++         +  V EL   +        ++     + 
Sbjct: 248 ESFPLLMSIFFLAAIIVGGMGTILGGIFGAVFMTMVPELLKLIVD-LLPGGVEMTVFLSP 306

Query: 319 RHTTLMVIALFLVILMRSHSLL 340
             T +  + +   ++   H L 
Sbjct: 307 VRTVVFGLLIVGFLVFEPHGLA 328


>gi|225174721|ref|ZP_03728719.1| inner-membrane translocator [Dethiobacter alkaliphilus AHT 1]
 gi|225169848|gb|EEG78644.1| inner-membrane translocator [Dethiobacter alkaliphilus AHT 1]
          Length = 358

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 58/305 (19%), Positives = 122/305 (40%), Gaps = 35/305 (11%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
              Y+  +     I+ ++A    ++ G  G +S    + + + AY+  +L    G+ + +
Sbjct: 43  DSSYLLRVITLTSIFTIYAASWDLLGGFTGQISFGHALFFGVAAYTSALLNLHLGMPVLI 102

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
            IP+ A+ +   G+++GLP L+ +G Y ++A+L    I   I+  +  +T G+ GI    
Sbjct: 103 TIPLGALAAVLSGLVLGLPGLRLKGPYFSLASLAFPIIMMGIVFTFPQLTGGELGISGIT 162

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
           RL                        +  YY+ L +  +    +  +  + I   +  IR
Sbjct: 163 RL--------------------AETRLAEYYLSLIIMLIIVLAMWKIVTSKIGLIFHAIR 202

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           +++    +        K+ AF +S  F G+AG  +A     + P   +   ++ +I  VI
Sbjct: 203 EDEITVRASGINTSLYKMLAFIISGLFAGVAGGMYAHFMRVVGPSTLELIMSLQIIVWVI 262

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
            GG+ ++   A    IL  ++E    +  Y                  +  + + LV+ +
Sbjct: 263 FGGIATIYGSAVGVFILFPLMEYLRVVPEY---------------RMLIFALIVILVLRI 307

Query: 335 RSHSL 339
               +
Sbjct: 308 MPEGI 312


>gi|90417899|ref|ZP_01225811.1| putative permease protein, ABC-type branched chain amino acid
           transporter transporter [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337571|gb|EAS51222.1| putative permease protein, ABC-type branched chain amino acid
           transporter transporter [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 353

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 65/309 (21%), Positives = 130/309 (42%), Gaps = 16/309 (5%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 Y+ S  I I IY + A GL+++ G  G +SL     +  GA++   + S+    
Sbjct: 44  PLVFGGYVLSQMILIGIYGIAALGLNVLTGMTGQISLGHGAFFGFGAFASAWIASKGIP- 102

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + + IP++ +++ A GMI G+P+ + +G YLAIATL    I ++   +    T G  G  
Sbjct: 103 VLIAIPLAGLMTTAVGMIFGIPAARLKGLYLAIATLASQFILEDFFGRAAWFTGGPYG-- 160

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                        SL          +  +   +Y++L    +    +  L RT    A  
Sbjct: 161 -------------SLAETATLFGFPLNTDERYFYLVLFWVVICFLAVANLARTRDGRALV 207

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +RD+  +   +   +   ++ +F +SS F G+ GA +      +S + F    +I  ++
Sbjct: 208 AVRDHYLSAEIMGINLTRYRIMSFGISSFFAGIGGALYGHYLGFVSGEGFTILLSIEFLA 267

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           ++I+GG+ S+S      A ++ + ++         +                +  A+ L 
Sbjct: 268 MIIIGGLGSVSGSLLGAAFILLLPQVMEIFANGLADVFPAIAQGTAYIKQMSVGAAIILF 327

Query: 332 ILMRSHSLL 340
           +++    L+
Sbjct: 328 LVLEPEGLV 336


>gi|269793004|ref|YP_003317908.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100639|gb|ACZ19626.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 293

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 83/306 (27%), Positives = 137/306 (44%), Gaps = 32/306 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y  S+   I I  + A GL+++VG  G +SL     + IGAY+  +L +      WL 
Sbjct: 2   NDYAVSVATIIAIQAIGALGLNVIVGYAGQISLGHAAFFGIGAYACAMLTTNGLS-FWLA 60

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +PV   ISG+ G ++GLPS++ + D+LAI T+ ++ I + I + + P   G  GI    R
Sbjct: 61  LPVVLAISGSVGALLGLPSIRLKEDFLAITTIGINFIVEAIFL-YTPFFGGALGIGGIPR 119

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           + FLG  ++                +   ++ L     S    LW RR+ +      IR+
Sbjct: 120 VVFLGEKLKG---------------VGFLWLCLAFLGASVLGCLWFRRSWLGLGCFAIRE 164

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  S+    +  KLSAF V +    ++GA +A     ISP  F F  +++ +S+V+L
Sbjct: 165 DETAAASMGIWPMKFKLSAFVVGAKLAALSGALYAHYMRFISPGDFGFPVSVMFLSMVVL 224

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM +L        +L  + E+   +  Y                  L    L  +I  +
Sbjct: 225 GGMGTLWGPVVGAVVLGILPEVFRPIMEY---------------RMLLYGALLLGMIRFQ 269

Query: 336 SHSLLR 341
              LL 
Sbjct: 270 PGGLLG 275


>gi|170289454|ref|YP_001739692.1| inner-membrane translocator [Thermotoga sp. RQ2]
 gi|170176957|gb|ACB10009.1| inner-membrane translocator [Thermotoga sp. RQ2]
          Length = 358

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 129/361 (35%), Gaps = 47/361 (13%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +L+     +  +  +  + L L+L       Y   +   I IY + A  L+++ G  G+ 
Sbjct: 6   KLSARTNFILTVVFLIFVALLLYLADRYMDSYKLRVVRLIAIYGIMAVSLNLINGITGIF 65

Query: 67  SLNCVIAYAIGAYSYVI-------------------LGSRYGLSIWLLIPVSAMISGACG 107
           SL       IGAY+  +                     +      +       +++    
Sbjct: 66  SLGHAGFILIGAYTASLLTLSPEQKAMSFIIEPIVPWLANAHTDFFTATVAGGVLAAVFA 125

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
             +G P L+  GDYLAIA+L  +E+ + I +    ITNG  G+                 
Sbjct: 126 FFIGWPVLRLSGDYLAIASLGFAEVIRIIALNAISITNGPLGLKGIP------------- 172

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                       E    +   G  F++   +  L  ++   A + IR+++ A  ++   +
Sbjct: 173 ------------EYSNIWWCYGWLFVTVLFMASLVNSSYGRALKAIREDRIAAEAMGINV 220

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIA 285
              +L +F + + F G++G+ +A     I P            V+ +++LGG+ S+S   
Sbjct: 221 FKHQLLSFVIGAFFAGVSGSLYAHWLTTIDPRTTTLGPMLTFYVLIMIVLGGLGSISGSL 280

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
              A+   + E    +   +    +            ++     LV++     ++     
Sbjct: 281 IGAALFAILFEWLRDLEEPFTFFGIHVP-GIKGMRILVISAIFILVMIFWQRGIMGREEL 339

Query: 346 S 346
           +
Sbjct: 340 T 340


>gi|330505117|ref|YP_004381986.1| ABC transporter-like protein [Pseudomonas mendocina NK-01]
 gi|328919403|gb|AEB60234.1| ABC transporter related protein [Pseudomonas mendocina NK-01]
          Length = 599

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 54/337 (16%), Positives = 118/337 (35%), Gaps = 31/337 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L+  L +       Y  ++   I +Y +   GL ++ G  G+ S        +GAY
Sbjct: 6   LILALVAVLAVAPAVLPPYYVTLLNYIGLYTLVVLGLVLLTGVGGMTSFGQAAFVGLGAY 65

Query: 80  SYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           +              +    S WL + V   ++    +++G  +LK  G YL + T+   
Sbjct: 66  TSAYLTTVQDLPSWLAWASASPWLTLLVGLALTAIVALVLGALTLKLSGHYLPLGTIAWG 125

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                +    + +  G  G+     +   G  +    +              +YY++  +
Sbjct: 126 LSLYYLFGTLESL-GGHTGVSGLPSISLFGWALDKGEK--------------IYYLIWAI 170

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              +  I   L  +    A R ++  Q    S+       K+  F +S+ F  ++G  +A
Sbjct: 171 LLGAMLITQNLLDSREGRAIRALKGGQLMAESMGVNTFRTKMVIFLISALFAALSGWLYA 230

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            ++  ++P  F     I  + + ++GG+ S+        +L  + +    +      +  
Sbjct: 231 HTQRFVNPTPFGLHMGIEYLFMALIGGVASVWGALLGAGVLTMLKQWLQDLLPQLLGN-- 288

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                       +  IA+ L++      L  L T   
Sbjct: 289 -----TGNYEVIVFGIAIVLLMQRAPGGLWPLLTRLL 320


>gi|283455041|ref|YP_003359605.1| branched-chain amino acid AbC transporter permease [Bifidobacterium
           dentium Bd1]
 gi|283101675|gb|ADB08781.1| branched-chain amino acid ABC transport system permease component
           [Bifidobacterium dentium Bd1]
          Length = 469

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 97/305 (31%), Gaps = 28/305 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I  L+  + + G+++V G+ GL S +      +G     +      + +      + +I
Sbjct: 189 IIFGLMLGLMSVGMNLVYGTTGLQSFSHGEQVTLGGLMAYVGTQMLHMPVVASAIFAIVI 248

Query: 103 SGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
               G+I          R     +  +I++      L        G     +        
Sbjct: 249 GAITGLIQNEIVWGPLRRRHVGTMQQMIVTIGLSMALQYTFQFFFGGDIKGIV------- 301

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                      F    +  ++      L    +   + L+L +T +  A R + DN    
Sbjct: 302 -----KSVPDSFQLGPITTDMPTLLSALIAICVIIGVTLFLYKTRLGRATRAVSDNAALA 356

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +    +       + +S +   ++G       + IS +    +  +++ + V LGG+ +
Sbjct: 357 AASGINVDQVVRVVWILSCSMAALSGVLLGIYLNGISWNT-GATLILLMFAAVTLGGLGT 415

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
            +     + ++  V ++   +               N       +  L +V+L+R   + 
Sbjct: 416 ANGALIGSLVIGIVADMSSLVIP-------------NDMRYASALAILIIVLLVRPQGIF 462

Query: 341 RLRTP 345
             +  
Sbjct: 463 GKQQR 467


>gi|239820626|ref|YP_002947811.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239805479|gb|ACS22545.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 341

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 61/318 (19%), Positives = 113/318 (35%), Gaps = 24/318 (7%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y  ++     I+ +   GL+++ G  G  +L      AIGAY+  IL   +    W
Sbjct: 21  TDNDYHLTVMSSAYIFALATLGLNLITGYTGQFNLAHAGFMAIGAYTVGILTVDHQWPFW 80

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
               +S ++    G+ +GL SL+ +G + AI T+ M  I    + KW+ +T+G  GI   
Sbjct: 81  AAFCLSGLVPVVLGLPIGLLSLRLKGHFFAIFTMCMGYILFLGIEKWESLTHGAVGIIGI 140

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L T                     +YY++LG   L   ++  +  + +   +  I
Sbjct: 141 PVPEALPTPFGD---------VSFDSPRALYYLVLGFLTLGLWVMHRIVGSLLGRTFVAI 191

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R+      SL   ++  KL AF +S  + G AG  +A     +SPD+        +   +
Sbjct: 192 RNGDDLAESLGINLMRNKLLAFLLSVFYAGTAGGLYAGFVRFLSPDLAGVERTFDMTMYM 251

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
                           I      L   +       L ++          +    L ++++
Sbjct: 252 ---------------LIGGAGTLLGPLLGALGVPWLAQYLQFLQDYRFIVFGPLLIVLVI 296

Query: 334 MRSHSLLRLRTPSNFLER 351
                ++          R
Sbjct: 297 FLPDGIVGWVRGQWLRRR 314


>gi|116249072|ref|YP_764913.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253722|emb|CAK12115.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 328

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 72/311 (23%), Positives = 123/311 (39%), Gaps = 25/311 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                +YI    I  LI+++ A GL+++VG  GLLSL     + IGAY+  +L   YG  
Sbjct: 31  PFIGSRYITHSLIIALIFMLPAHGLNLLVGYTGLLSLAQAAFFGIGAYTAGLLAVTYGTP 90

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            ++ +  +  +SGA  + +G+P+L+ R     + TL    I Q I   W  +T G  G+ 
Sbjct: 91  FYVNLIAAGAVSGALALPLGIPALRLRSTSFVMCTLGFVIIGQAIAKNWVSLTRGDMGLS 150

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              + YF               S  V      YY+ L +  L+   +  + R+       
Sbjct: 151 SIPKPYFEL----------GPLSFTVSGTTNFYYLALIIGTLATFAVWAIVRSPAGRNMV 200

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            IR+N+    SL       KL  F +S+ F G+ G  +A     +SP  F+   +  ++ 
Sbjct: 201 AIRENETLAESLGVPTWHYKLIVFMISAVFAGVGGCLYAYYLTVVSPLTFQMYYSTTMLI 260

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           IV+ GG   +S     + + +G+ E                             + L ++
Sbjct: 261 IVLGGGAGMISGTVFGSLLFVGLTEALR---------------ITPELRMIAYGVCLLVL 305

Query: 332 ILMRSHSLLRL 342
           +         L
Sbjct: 306 VFWFKKGCAPL 316


>gi|307265576|ref|ZP_07547130.1| inner-membrane translocator [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919374|gb|EFN49594.1| inner-membrane translocator [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 331

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 63/323 (19%), Positives = 135/323 (41%), Gaps = 30/323 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V  L+  L          +  +    LIY + A GL++++G  G +SL      A+GAY
Sbjct: 10  IVLILIATLIPPILNLPGSLQYLLDLSLIYAIVAIGLNLLMGYAGQISLGHGAFLAVGAY 69

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +   L     +  ++ + +S +I+G  G+++GLP+LK   +YLAIATL        I   
Sbjct: 70  TSAYLTLTLHVPFFIALILSGLITGIVGILLGLPALKLERNYLAIATLGFGVAVTQIFAI 129

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W   T G +GI       F                      +  YY++L +  +   +  
Sbjct: 130 WTNFTGGFSGIKPLRPELFGFKF---------------NSYLSYYYIILILTIVLVILTW 174

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            + RT +  +   +RD++ A  ++   + + K  AF +S+ + G+AG+ +A     ++P 
Sbjct: 175 NIIRTKVGRSLMAMRDSEIAAKAMGINVSYYKTLAFGLSAFYTGIAGSLYAHLLGFMTPY 234

Query: 260 MF--KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            +      ++  ++++++GG+ ++S       I+  + ++   +                
Sbjct: 235 DYAFSIGMSLNFLAMIVIGGIGTISGSIIGAIIMTWLPQITSNL-------------PIK 281

Query: 318 MRHTTLMVIALFLVILMRSHSLL 340
                +    +  V++   + + 
Sbjct: 282 SLSQIITGAIIIAVVIFYPNGIA 304


>gi|304438255|ref|ZP_07398196.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Selenomonas sp. oral
           taxon 149 str. 67H29BP]
 gi|304368621|gb|EFM22305.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Selenomonas sp. oral
           taxon 149 str. 67H29BP]
          Length = 316

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 71/327 (21%), Positives = 126/327 (38%), Gaps = 41/327 (12%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + + A++   ++     A     +     I   I ++ A  L+++ G  G  SL      
Sbjct: 11  MLVFALIIYAVIMGLTSAGMLNAFWQLNLIFAGINIILAASLNLINGYTGQFSLGHAGFM 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AIGAY  V+L + + L     +      +G  G ++GLP+L+ RGDYLAIATL + EI +
Sbjct: 71  AIGAYVGVVLTTNFHLPFAAALLAGGAAAGLLGALIGLPTLRLRGDYLAIATLGLGEIVR 130

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+I    +  G AG      L                              +  +   +
Sbjct: 131 IIIINVPYV-GGAAGFKGIPHLTNFT-------------------------WVFFLMLAT 164

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             II     +    A   IR+N+ A  S+       K+ AF + + F G+AG  F  +  
Sbjct: 165 LCIIKNFVNSRHGRACLAIRENEIAAESMGINTTKYKVLAFTIGAFFAGVAGCLFGHNMY 224

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            +SP  F F ++  ++ +V++GG+ S++       ++  +                    
Sbjct: 225 ILSPASFTFMQSFNILIMVVMGGLGSMTGSIAGALVVTFLSAALASF------------- 271

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  +AL L++  R   L  
Sbjct: 272 --PNARMIIYALALILLMFYRPQGLFG 296


>gi|86151141|ref|ZP_01069357.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni 260.94]
 gi|315124507|ref|YP_004066511.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|85842311|gb|EAQ59557.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni 260.94]
 gi|315018229|gb|ADT66322.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 350

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 72/341 (21%), Positives = 127/341 (37%), Gaps = 47/341 (13%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-------- 83
                 Y  ++  QI I+++ A   +++ G  G  SL      AIGAY+  +        
Sbjct: 24  PYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIGAYAAALVLLSADAK 83

Query: 84  ------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                       + + +  S  L + V+ + S    +I+     + RGDYLAI TL    
Sbjct: 84  NDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGI 143

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +   I +  ITNG  G+    +                             Y   G+ 
Sbjct: 144 IIKIAAINFPSITNGSRGLVDIPQFS-------------------------TIYWTGGIA 178

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            ++  +IL +  +    A + IRD++ A  ++     + K  AF+ S+   G+ G   A 
Sbjct: 179 IVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFSTSAFLEGVGGGLLAC 238

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN--SL 309
               +SP  F F     ++ I++LGG+ S +       ++IG  E    ++       SL
Sbjct: 239 LLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEWLRFLDELNIKIDSL 298

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                S       +  I L LV+L     ++     S+ + 
Sbjct: 299 NLDIQSTPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 339


>gi|77406653|ref|ZP_00783696.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae H36B]
 gi|77411403|ref|ZP_00787750.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae CJB111]
 gi|77162576|gb|EAO73540.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae CJB111]
 gi|77174725|gb|EAO77551.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae H36B]
          Length = 317

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 78/335 (23%), Positives = 140/335 (41%), Gaps = 42/335 (12%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              + V+  LL+ + +       Y   +   I I V+ A GL+++VG  G  SL      
Sbjct: 11  WLAIVVLGYLLISVLISMGIFNLYHIQIIETIGINVILAVGLNLIVGCSGQFSLGHAGFM 70

Query: 75  AIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           AIGAY+  I+G +        + I V  +++G   + +G+P+L+ +GDYLAIATL ++EI
Sbjct: 71  AIGAYAVAIIGVKMPTYVGFLIAILVGTLVAGGIALGVGIPTLRLKGDYLAIATLGVAEI 130

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            + +L+    ITNG AGI                                 + ++ G+  
Sbjct: 131 IRILLVNGGDITNGAAGIMGIPPFT-------------------------TWSLVYGVAV 165

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +S  + +   R+ +      IR+++ A  S+       K+  F   +    +AG+  A  
Sbjct: 166 VSLILAMNFLRSPLGRNTIAIREDEIAAESMGVDTTKVKVIVFIFGAILASIAGSLQAGY 225

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              + P  F F  ++ V+ IV+LGG+ S++    A  +L  +  L               
Sbjct: 226 VGTVMPKDFSFMMSVNVLIIVVLGGLGSMTGTVLAAILLGLLNMLLQDY----------- 274

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                     +  +AL L+++ R   LL  +  + 
Sbjct: 275 ----ASVRMIIYALALILIMIFRPSGLLGTKELTL 305


>gi|27378466|ref|NP_769995.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351614|dbj|BAC48620.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 348

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 59/338 (17%), Positives = 123/338 (36%), Gaps = 35/338 (10%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +   +  +     +       Y+ +  I   I+V+ A  L++++G  G LSL  +  + I
Sbjct: 3   IALTILAVAALASVPLWLRDPYLLNALITTGIFVIGAMSLNLLLGFTGQLSLGHIAFFGI 62

Query: 77  GAYSYVILG-------------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           GAY   +                       +   ++ +I+G CG  +GL S + RG Y  
Sbjct: 63  GAYVSALTSLGFDIGLPGDLRLVHTPWPPIVGFVLAILIAGLCGYFVGLLSFRVRGAYFV 122

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           I T+  +E+ + + + W  +T G   +     +          +         +  ++  
Sbjct: 123 IVTISFAEVVRLVALNWVELTQGPLALTNIPSIA---------LPLPGLSELTLRTKMQN 173

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           YY++L +  ++  +I  L  +    A R + +N+    S+   +      A  +S+A  G
Sbjct: 174 YYLVLVVALIAYLLIARLVHSHFGRAMRGLMENETLAVSVGIDVTKTLTLAAVISAAIAG 233

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
            AG+ +A     I P++F F   + ++ +VI GG  SL+       I   +         
Sbjct: 234 AAGSLYAHYIRIIDPEVFAFINTVTMVIMVISGGKGSLAGPVVGGLIFGLLPVALR---- 289

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                                   L  ++ +    ++ 
Sbjct: 290 ---------PIMAPEAQWIAYGGVLIAILFVLPRGIVP 318


>gi|99081354|ref|YP_613508.1| inner-membrane translocator [Ruegeria sp. TM1040]
 gi|99037634|gb|ABF64246.1| inner-membrane translocator [Ruegeria sp. TM1040]
          Length = 399

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 61/363 (16%), Positives = 127/363 (34%), Gaps = 32/363 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           K   I+ +L +  P +L  F   +   ++      +  + +I+ +FA G +I+ G  G L
Sbjct: 10  KLLMIVAVLTMFAPFILNPFPVDSAMAQFNAGYPDLMQRFVIFGVFAIGFNILFGLTGYL 69

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S        +G+Y+ V +     +++   I +S ++SG   +++G  SL+  G Y +I T
Sbjct: 70  SFGHAAFLGVGSYAAVWMFKLLSMNVLPAIVLSVLVSGLFSLVIGFVSLRRSGIYFSILT 129

Query: 127 LIMSEIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
           L  +++   +                     P   G +     +        +       
Sbjct: 130 LAFAQMMFALAYSVLTPITGGETGLQLALDDPRILGASQTAEGNIPVPSLFGLEMRDSAE 189

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                +     F YY    +   S  + + + R+      R ++ NQ+            
Sbjct: 190 LVIGGWSFTFNFGYYFCALVMLASFYLAIRIFRSPFGMMLRAVKSNQQRMNYTGLNSRPY 249

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
            L+AF +S  + G+AG   A+       +  +++ +  V+ + ILGG  +L         
Sbjct: 250 MLAAFVISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLGAGF 309

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM-------------VIALFLVILMRSH 337
           +     +   +N    +S   F           +              I   LV++    
Sbjct: 310 IKYFENIFSKINDNVLHSWFSFLPDGLEDFVVFIIHPFIGKGWHLTLGILFMLVVIYLPG 369

Query: 338 SLL 340
            L+
Sbjct: 370 GLV 372


>gi|212697512|ref|ZP_03305640.1| hypothetical protein ANHYDRO_02082 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675511|gb|EEB35118.1| hypothetical protein ANHYDRO_02082 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 330

 Score =   99 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 71/334 (21%), Positives = 139/334 (41%), Gaps = 45/334 (13%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L ++   ++ + +       Y  S+   + I ++ +  L+I VG+LG ++L      +IG
Sbjct: 25  LVLISFAIIQILISVGIIDSYWQSIIFLLCINIILSVSLNITVGNLGQITLGHAGFMSIG 84

Query: 78  AYSYVILG----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           AYS  I       +  L  ++ + +  + +    + +G+P L+  GDYLAI TL   EI 
Sbjct: 85  AYSAAIFLKTGLVQGILGFFIALIIGGLFAFLFSLAIGVPVLRLNGDYLAIVTLAFGEII 144

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           + ++     IT G  G+                              I  + ++  +  L
Sbjct: 145 RVVVENL-SITGGAQGMSGIP-------------------------TIDSFGLIFFVTVL 178

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           S   +  +  +    A   I+DN+ A  S       +K+ AF +S+ F G+AGA +A + 
Sbjct: 179 SVVFMYSIMTSRFGRAVLAIKDNELAAESCGINTTKSKIFAFTLSALFAGVAGAIYAQTT 238

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             I+ ++F ++++  ++ +V+LGGM   +    +T +L  V E+      Y         
Sbjct: 239 GVIAANVFNYNKSFDILVMVVLGGMGFFTGSIISTIVLTVVPEILRAFAEY--------- 289

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                    +  + L +V++ R   L+     S 
Sbjct: 290 ------RMIIYSVILVIVMIFRPQGLMGREEFSI 317


>gi|282856337|ref|ZP_06265617.1| inner-membrane translocator [Pyramidobacter piscolens W5455]
 gi|282585840|gb|EFB91128.1| inner-membrane translocator [Pyramidobacter piscolens W5455]
          Length = 308

 Score =   99 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 69/309 (22%), Positives = 126/309 (40%), Gaps = 40/309 (12%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y++ + + + I ++ A G+S++ G  G+ +L      A+GAY+  IL   Y +     
Sbjct: 24  DYYMEGILMLLCINMIAAMGVSLLTGFTGIFTLGHAAYMAMGAYTAAILIMNYDVPWLPS 83

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +    +++ A   ++G+P++K  GDY AIA+L + E  + ++  W+ +T G  GI   D 
Sbjct: 84  VLAGGVLAAALAWVVGVPTMKLTGDYYAIASLGLCEAIRLVIENWQSVTRGARGIPGIDP 143

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                         V +      A  +  L  +     +R  RD
Sbjct: 144 YTTR-------------------------AVAVWFFAALALFMFNLIYSRWGRYFRACRD 178

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
              A   L       +L +  +S+ + G+AGA        I P MF   ++  + S+V+ 
Sbjct: 179 GVTAASLLGFNTPSIRLVSLLISAFYCGIAGALLGGYLSFIQPAMFDMMKSTELTSLVVF 238

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S+S    AT I+  + EL   ++ Y                  +    L +V+++R
Sbjct: 239 GGLGSMSGTLLATCIITLITELFRPISQY---------------RMLIYGAVLVMVMVLR 283

Query: 336 SHSLLRLRT 344
              LL  R 
Sbjct: 284 PDGLLGSRE 292


>gi|163743233|ref|ZP_02150614.1| ABC transporter permease protein [Phaeobacter gallaeciensis 2.10]
 gi|161383421|gb|EDQ07809.1| ABC transporter permease protein [Phaeobacter gallaeciensis 2.10]
          Length = 327

 Score =   99 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 58/314 (18%), Positives = 113/314 (35%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L   AV+  LL          + ++ ++  ++ I  +   GL+I +G  GL+SL     +
Sbjct: 6   LLNAAVILLLLAIPLWAHMTEEPFLITLATKVAILALAGVGLNIALGIGGLVSLGHAAFF 65

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IG Y+  IL +       L      +       ++ L ++        +   +      
Sbjct: 66  GIGGYAMGILAAHAQNYEPLAEWPLLIEGTNQMPVIWLVAVVASALAALVIGALSLRTSG 125

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              I            +      + G    S+     FP    +  +  + +   +  ++
Sbjct: 126 VYFIMITLAFGQMLYYFAISWSAYGGEDGLSIWVRNEFPGMNTLAPLQFFLICYAILCVA 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L R     A    R  +    ++  T    +L+AF +S A  G+AGA FA    
Sbjct: 186 LWFAARLARAPFGLALSAARQCEARVETVGITPYQLRLTAFVISGAITGLAGALFADLNR 245

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            +SP MF +  +  ++  VI+GG+  L       A+ I +  L  G++ Y+   L     
Sbjct: 246 FVSPTMFSWHTSGEIMIFVIIGGVGRLFGPVIGAALFILLEHLLGGISDYWQIYLGGLLL 305

Query: 315 SFNMRHTTLMVIAL 328
              +     ++ A+
Sbjct: 306 IIVLYARGGVIGAI 319


>gi|255262527|ref|ZP_05341869.1| inner-membrane translocator [Thalassiobium sp. R2A62]
 gi|255104862|gb|EET47536.1| inner-membrane translocator [Thalassiobium sp. R2A62]
          Length = 401

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 135/385 (35%), Gaps = 45/385 (11%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGAT------KSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           K  ++L ++AV+  L   +           +       +  + +I+ +FA G +I+ G  
Sbjct: 7   KDARLLLIVAVMVALAPIILNPFPEDSAMAQFNAGYPDLMQRFVIFGIFAIGFNILFGLT 66

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G LS         G+Y+ + +     +++   I +S +++G   + +G  SL+  G Y +
Sbjct: 67  GYLSFGHAAFLGAGSYAGMWMMKLLSINVIPAIILSTVVAGVIALAIGWISLRRSGIYFS 126

Query: 124 IATLIMSEIFQNIL----------------------IKWKPITNGKAGIYVADRLYFLGT 161
           I TL  +++   +                       I  + +  G +      +    G 
Sbjct: 127 ILTLAFAQMAFALAASVLTPITGGETGLQTNLNDPRIFPEFLGGGSSVDGNIPKPSLFGI 186

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            + S   F      +     + YY+   M  ++  I + + R+      + ++ NQ    
Sbjct: 187 EMSSS--FKVPVGGWEWTFNWGYYLCGVMMLVAFYIAIRIFRSPFGLMLKAVKSNQHRMS 244

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
                     L+ F +S  + G+AG   AA   ++  +  +++ +  V+ + ILGG+ +L
Sbjct: 245 YTGLNTRPYMLTCFVISGMYAGLAGGLMAAMDPQVGAERMQWTASGEVVLMTILGGIGTL 304

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIAL 328
                   ++     +   +N    +    F                        + +  
Sbjct: 305 IGPVLGAGLIKYFENIFSKINSSLLHEWFAFLPDGLENFIVAIIYPFIGKGWHLTLGLMF 364

Query: 329 FLVILMRSHSL--LRLRTPSNFLER 351
             VI+     L  L  R    F ++
Sbjct: 365 MAVIIFLPGGLVELGKRLSKRFGKK 389


>gi|86152506|ref|ZP_01070711.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85843391|gb|EAQ60601.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 350

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 72/341 (21%), Positives = 127/341 (37%), Gaps = 47/341 (13%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-------- 83
                 Y  ++  QI I+++ A   +++ G  G  SL      AIGAY+  +        
Sbjct: 24  PYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIGAYAAALVLLSADAK 83

Query: 84  ------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                       + + +  S  L + V+ + S    +I+     + RGDYLAI TL    
Sbjct: 84  NDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGI 143

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +   I +  ITNG  G+    +                             Y   G+ 
Sbjct: 144 IIKIAAINFPSITNGSRGLVDIPQFS-------------------------TIYWTGGIA 178

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            ++  +IL +  +    A + IRD++ A  ++     + K  AF+ S+   G+ G   A 
Sbjct: 179 IVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFSTSAFLEGVGGGLLAC 238

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN--SL 309
               +SP  F F     ++ I++LGG+ S +       ++IG  E    ++       SL
Sbjct: 239 LLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEWLRFLDELNIKIDSL 298

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                S       +  I L LV+L     ++     S+ + 
Sbjct: 299 NIDIQSTPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 339


>gi|27378727|ref|NP_770256.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351876|dbj|BAC48881.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 337

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 70/321 (21%), Positives = 124/321 (38%), Gaps = 25/321 (7%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L     +       Y     I  LI+++ A GL+++ G  GLLSL     + IGAY+ 
Sbjct: 30  LALGALACVAPLFLGNYPLHAIIIALIFLLPAHGLNLLQGYTGLLSLAQAAFFGIGAYTS 89

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +L   +G   +L    + +++GA    +G+P+L+ R     + TL    I Q I   W 
Sbjct: 90  ALLAVHFGTPFYLNFLAAGLVTGAIAAPLGIPALRLRTTSFVMCTLGFVIIGQAIAKNWI 149

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G  G+    + YF               S  V   +  YY+ L +  L+   +  +
Sbjct: 150 SLTRGDMGLAGIPKPYFAL----------GPASFTVSGTVAFYYLTLVIAALATLAVYLI 199

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R+        IR+N+    S+       KL  F +S+AF G+ G+ +A     +SP  F
Sbjct: 200 VRSPAGRNMIAIRENETLAESVGIPTWHYKLVVFMISAAFAGLGGSLYAHYLTVVSPLTF 259

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
           +   +  ++ IV+ GG  ++S +   + + +G+ E                         
Sbjct: 260 QMYYSTTMLIIVLGGGAGTISGVIFGSLLFVGLTEALR---------------VAPELRM 304

Query: 322 TLMVIALFLVILMRSHSLLRL 342
                 L  ++         L
Sbjct: 305 IAYGFFLLGLVFWFPSGFAPL 325


>gi|21225463|ref|NP_631242.1| branched amino acid transport system permease [Streptomyces
           coelicolor A3(2)]
 gi|9716223|emb|CAC01584.1| putative branched amino acid transport system permease
           [Streptomyces coelicolor A3(2)]
          Length = 349

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 62/337 (18%), Positives = 130/337 (38%), Gaps = 25/337 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           AV   LLL +    T+   Y  S+ + + +    A GL  +VG  G +SL     +A+G 
Sbjct: 17  AVFVVLLLAVPAVFTRVPFYTMSVAVLMCLQATAALGLVPLVGRAGQISLGQAAFFAVGG 76

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL  R+ ++  L +     ++ A   ++GL   + +G YLA+ATL    +  ++  
Sbjct: 77  YTSAILTGRWHVNALLALTAGVALAMAVAYVVGLFIFRAQGQYLALATLSFGLVVSSLAN 136

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +   +T    G+     L   G  + +               + +YY++ G+  ++   +
Sbjct: 137 QLP-LTGASNGLAGIPSLAPFGVELDTD--------------LSVYYLVAGVLLVAVLSV 181

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+   +A   + D+  A  +   +    +  A A+++    +AG+ +A     +  
Sbjct: 182 DALLRSPAGDALSALGDSPVATEAAGVSAAALRRGALALAAGLASIAGSLYAHWSSFMDS 241

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                  ++ ++ I  +GG+ +         +++   E    +          F  +   
Sbjct: 242 GQAGLLNSVQLLVIASVGGLRTPWGAPLGALVIVTFSEASKDLIPKV------FPSATGN 295

Query: 319 RHTTLMVIALFLVILMRSHSLLR----LRTPSNFLER 351
               +  IAL  V+L     +       R  S    +
Sbjct: 296 FDIIVYGIALIAVLLFLPRGVGGVTAVRRERSVRKRQ 332


>gi|260584959|ref|ZP_05852703.1| branched-chain amino acid ABC transporter permease [Granulicatella
           elegans ATCC 700633]
 gi|260157389|gb|EEW92461.1| branched-chain amino acid ABC transporter permease [Granulicatella
           elegans ATCC 700633]
          Length = 324

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 83/341 (24%), Positives = 143/341 (41%), Gaps = 43/341 (12%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R ++ + I    AVV  LLL + +       Y +S  I I+I ++FA GL++++G  G  
Sbjct: 6   RFHQKNLIWLASAVVIYLLLQVLVQVGVINFYYESTFINIMINIIFAVGLNLILGVAGQF 65

Query: 67  SLNCVIAYAIGAYSYVIL--GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           SL      AIGAYS  I+         ++  + V  +IS     ++GLP+L+ +GDYLAI
Sbjct: 66  SLGHAGFIAIGAYSAAIIGKAVSGLAGLFAGMVVGVVISIVIAYLVGLPTLRLKGDYLAI 125

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           ATL ++EI + + +    ITNG AGI                                 +
Sbjct: 126 ATLGVAEIIR-VALNNMKITNGAAGISGVPLTT-------------------------TW 159

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            ++     L+  ++L    ++   A   +  ++ A  S+   +   K+ AF + +A   +
Sbjct: 160 TIVYIALVLTTILVLNYANSSAGRATYAVLQDEIAAESMGVNVTRYKMLAFIIGAATASI 219

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            G   A     ++P  F F ++I V+ IV+ GG+ S +    A  +L  +          
Sbjct: 220 GGTLTATYLGTVTPSDFTFMKSIDVLIIVVFGGIGSFTGSFVAAILLGIINTFLQ----- 274

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      F      +  +AL L+++ R   LL     
Sbjct: 275 ----------PFGQLRMIIYAVALILIMIFRPGGLLGTWEF 305


>gi|309781874|ref|ZP_07676607.1| branched-chain amino acid ABC transporter, permease protein
           [Ralstonia sp. 5_7_47FAA]
 gi|308919515|gb|EFP65179.1| branched-chain amino acid ABC transporter, permease protein
           [Ralstonia sp. 5_7_47FAA]
          Length = 543

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 79/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ + +              +     +        
Sbjct: 269 ITYGLIGVINMAHGEFLMIGAYATYVVQTIFRNYFPNAFDWYLPAALPAAFLAAAVVGFA 328

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         +        +     S +         +
Sbjct: 329 LER--LVLRHLYGRPLETLLATFGISLLLMQAVRSIFGAQNVEVANPSWMSGGIALYPGL 386

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       +LL    + A     L RT +    R    N+     +          AFA 
Sbjct: 387 VLPYNRLVILLFALAVVAIAWAVLNRTRLGLFVRATTQNRTMAACVGVRTWKVDSYAFAF 446

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  L+        L  + + 
Sbjct: 447 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTIIGAFGLGLINKF 504

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                    ++++ + L I  R   L  L+  S  
Sbjct: 505 IEPFYGAVLAK-------------IIVLVLIVLFIQKRPQGLFALKGRSAE 542


>gi|238927652|ref|ZP_04659412.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Selenomonas flueggei ATCC
           43531]
 gi|238884577|gb|EEQ48215.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Selenomonas flueggei ATCC
           43531]
          Length = 316

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 71/333 (21%), Positives = 127/333 (38%), Gaps = 41/333 (12%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + + A++   ++     A     +     I   I ++ A  L+++ G  G  SL      
Sbjct: 11  MLVFALIIYAVIMGLTSAGMLNAFWQLNLIFAGINIILAASLNLINGYTGQFSLGHAGFM 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AIGAY  V+L + + L     +      +G  G ++GLP+L+ RGDYLAIATL + EI +
Sbjct: 71  AIGAYVGVVLTTNFHLPFAAALLAGGAAAGLLGALIGLPTLRLRGDYLAIATLGLGEIVR 130

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+I    +  G AG      L                              +  +   +
Sbjct: 131 IIIINVPYV-GGAAGFKGIPHLTNFT-------------------------WVFFLMLAT 164

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             II     +    A   IR+N+ A  S+       K+ AF + + F G+AG  F  +  
Sbjct: 165 LCIIKNFVNSRHGRACLAIRENEIAAESMGINTTKYKVLAFTIGAFFAGVAGCLFGHNMY 224

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            +SP  F F ++  ++ +V++GG+ S++       ++  +                    
Sbjct: 225 ILSPASFTFMQSFNILIMVVMGGLGSMTGSIAGALVVTFLSAALASF------------- 271

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                   +  +AL L++  R   L      + 
Sbjct: 272 --PNARMIIYALALILLMFYRPQGLFGYVEITA 302


>gi|222152612|ref|YP_002561787.1| branched-chain amino acid ABC transporter permease [Streptococcus
           uberis 0140J]
 gi|222113423|emb|CAR41102.1| branched-chain amino acid transport system permease protein
           [Streptococcus uberis 0140J]
          Length = 317

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 71/340 (20%), Positives = 136/340 (40%), Gaps = 42/340 (12%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           + +K       +  +  LLL   +G      Y   + + I I ++ A G ++V+G  G  
Sbjct: 3   KNSKSIMAWFGIIALVYLLLSFLIGKDIIGPYYVQILMGIGISIIMAMGTNLVLGFSGQF 62

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            L      AIGAY+  I  +        +L + +  +I+G  G+++G P+L+ +GDYLAI
Sbjct: 63  PLGQAGFMAIGAYTTAIFTNSMPTYLGFYLSMVLGVLIAGLVGVLVGFPTLRLKGDYLAI 122

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           ATL ++EI +  ++    +TNG AG+    R                             
Sbjct: 123 ATLGVAEIIRIAIVNGGDLTNGAAGLTGVLRYTSWP------------------------ 158

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            V+     L   + +   R++      ++R+++ A  S+       K+  FA ++    +
Sbjct: 159 -VVYAFVILIIILTMNFLRSSSGRQVISVREDEIAAESMGVNTTKMKVMTFAFAAMTASI 217

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG+ +      + P  F    +I  + I +LGG+ S++    A  +L  +          
Sbjct: 218 AGSLYVGYIGTVVPKDFTLMRSIDYLIIAVLGGLGSMTGTIVAAIVLGALNMYLQSF--- 274

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                       +     +  +AL LV++ +   LL  + 
Sbjct: 275 ------------SDVRMIIYSLALILVMVFKPSGLLGTKE 302


>gi|222100407|ref|YP_002534975.1| Branched chain amino acid ABC transporter, permease protein
           [Thermotoga neapolitana DSM 4359]
 gi|221572797|gb|ACM23609.1| Branched chain amino acid ABC transporter, permease protein
           [Thermotoga neapolitana DSM 4359]
          Length = 359

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 51/342 (14%), Positives = 115/342 (33%), Gaps = 9/342 (2%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           RL+     +  +  V  ++  L+L       Y   +   I IY + A  L+++ G  G+ 
Sbjct: 7   RLSTRTNFILTVIFVLFMVFLLYLANRYMDSYKLRVVRLIAIYGIMAVSLNLINGITGIF 66

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           SL       IGAY+  +L          +  +   I      +               A 
Sbjct: 67  SLGHAGFILIGAYTASLLTLSPEQK--AMSFIIEPIVPWLANVHTDFLTATLAGGALAAL 124

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
                 +  + +    +     G     R+      + ++           I E    + 
Sbjct: 125 FAFLIGWPVLRLSGDYLAIASLGFAEVIRI----VALNAISITNGPLGLKGIPEYSNIWW 180

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
             G  F++      L  ++   A + +R+++ A  ++   +   +L +F + + F G++G
Sbjct: 181 CYGWLFVTVLFTASLVNSSYGRALKAVREDRIAAEAMGINVFKHQLLSFVIGAFFAGVSG 240

Query: 247 AFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           + +A     I P            V+ +++LGG+ S+S      A+   + E    +   
Sbjct: 241 SLYAHWLTTIDPRITTLGPMLTFYVLIMIVLGGLGSISGSLIGAALFAILFEWLRDLEEP 300

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
           +    +       M    ++     LV++     ++     +
Sbjct: 301 FTFFGIHVPGIKGM-RILVISAIFILVMIFWQRGIMGREELT 341


>gi|192361121|ref|YP_001981732.1| Branched-chain amino acid transport system / permease
           domain-containing protein [Cellvibrio japonicus Ueda107]
 gi|190687286|gb|ACE84964.1| Branched-chain amino acid transport system / permease component
           domain protein [Cellvibrio japonicus Ueda107]
          Length = 584

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 91/295 (30%), Gaps = 21/295 (7%)

Query: 53  AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112
           A GLSI  G +G++++       IGAY   ++   +   I   + ++   +     ++G+
Sbjct: 309 AIGLSITFGVMGVINMAHGELMMIGAYVTWVVQQLFPNQIAYSLMIAIPSAFIVAGLVGI 368

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
              +    +L    L      + +L  +      +               + + +     
Sbjct: 369 AIERGVIRFLYGRPL------ETLLATFGLSLILQQAARSIFSPLNRAVELPAWMSGSLE 422

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
            +  +       Y+ +    +  +++  L++T++    R +  N+    ++     +   
Sbjct: 423 INPVLSITYNRLYIFIFGLLVFFALLAILKKTSLGLKVRAVSQNRAMARAVGVRASWVDA 482

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             F + S   G+AG   +   +         +  I    +V+ GG+ +L         L 
Sbjct: 483 MTFGLGSGIAGIAGVALSQLTNV--GPNLGQAYIIDSFMVVVFGGVGNLWGTLVGAMGLG 540

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
            + +            +L                     I  R   L   +  + 
Sbjct: 541 IINKFLEPYAGAVLAKVLVLVLLIL-------------FIQKRPKGLFPQKGRAA 582


>gi|295697593|ref|YP_003590831.1| inner-membrane translocator [Bacillus tusciae DSM 2912]
 gi|295413195|gb|ADG07687.1| inner-membrane translocator [Bacillus tusciae DSM 2912]
          Length = 343

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 74/336 (22%), Positives = 147/336 (43%), Gaps = 31/336 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             +   +L  +++   LL           +++ ++ I +L+Y++   G+ ++ G+ GL  
Sbjct: 6   QQRNRNLLKWVSLAALLLAAAIWPWWVDDRFLLNVMINVLLYMVLGMGMHLIFGTAGLPF 65

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L     Y IGAY+  +L +R     W  +P S        ++ G P L+ RG+Y  + +L
Sbjct: 66  LGYAGFYGIGAYTAALLMTRGVS-FWAALPASVAAVCLVALLFGAPILRLRGEYFMLGSL 124

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            + EI  ++ I    IT G  GI    +  +                  +      YY+L
Sbjct: 125 ALGEII-HLTINNLDITGGPNGIVGIPKPRWF--------------GGTLSQPADFYYLL 169

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +  +S +++ +L+++ +  +W  +R+++ A  ++       KL  F + SA+ G+AGA
Sbjct: 170 LVVVLVSIALLTYLQKSTVGRSWLALREDELAAEAVGVPTYRRKLQLFVLGSAWAGVAGA 229

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
           F AA    ++P  F    ++ +I I+I+GGM SL  +   T ++IG+ E    +      
Sbjct: 230 FLAARMGIVTPGSFTLMNSVQMIGIIIVGGMGSLPGVVLGTVLMIGLPEFVRALAD---- 285

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                          +  +A+  V+  R   +   +
Sbjct: 286 -----------WRLVIFGVAIMAVLRFRPRGIWPTK 310


>gi|16119752|ref|NP_396458.1| ABC transporter, membrane spanning protein (branched chain amino
           acid) [Agrobacterium tumefaciens str. C58]
 gi|15162344|gb|AAK90899.1| ABC transporter, membrane spanning protein (branched chain amino
           acid) [Agrobacterium tumefaciens str. C58]
          Length = 364

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 66/328 (20%), Positives = 129/328 (39%), Gaps = 16/328 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           VV   + +L +    +    +++ +  L   +   GL+++ G  G +SL      A+GA+
Sbjct: 21  VVVLAIAYLVVPFVGTSYLFEAILLPFLALSLAGVGLNLLTGYAGQVSLGSAAFMAVGAF 80

Query: 80  SYVILGSRYGLSIW-LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           +      R       + I ++ + +   G++ GLPSL+ RG YLA++TL      Q  L 
Sbjct: 81  AAYNFDLRVDGLPLTVSIVLAGLSAAIIGIVFGLPSLRLRGFYLAVSTLAAQFFVQWALT 140

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           K+  ++N  A   +                            +  Y   L        + 
Sbjct: 141 KFSWLSNESASGVIDAPAL-------------SLAGISFEGPVGRYLFALTTVTALTFLA 187

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRIS 257
             L  +     +  +RDN+ A   +   ++  KL AFA+SS  IG+AG  +A A    + 
Sbjct: 188 YRLVSSQTGRNFIAVRDNETAARIIGVPVLRTKLLAFAISSFIIGVAGVIWAFAYLRTVE 247

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F    +  ++ IVI+GG+ S+       A+++    +   +       +       +
Sbjct: 248 PAGFNLDRSFQILFIVIIGGLASIRGAFFGAALIVVFPLVLSRLGSLLLGDVFDSGV-LD 306

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTP 345
           M    ++   + L +++    L+ L   
Sbjct: 307 MTQRIVIGALIILFLILEPDGLVSLWDR 334


>gi|134291966|ref|YP_001115735.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|134135155|gb|ABO59480.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia vietnamiensis G4]
          Length = 347

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 55/295 (18%), Positives = 115/295 (38%), Gaps = 9/295 (3%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L     GA        S+  ++L++ + A G ++++G  GLLS    I + +G+Y+  ++
Sbjct: 32  LAVAVAGALPLALDSGSLATEVLVFALAALGCNLLLGYTGLLSFGQGIFFGLGSYAAGVV 91

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            +    S+   +  +A +  A   ++G  S++ RG Y  + TL   ++F  +      +T
Sbjct: 92  LTHGVESVTAALVAAAALGAAAAALVGWFSIRQRGTYFVMLTLAFGQLFYFVAYTTPDVT 151

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G  G+    R           +  F  P   +      Y  +  +      ++L + R+
Sbjct: 152 GGDNGLLDIPRPA---------LSVFGHPLVPLDSPWRYYGFVAVVFVAVFWLLLRVSRS 202

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                   IRDN+    +    +   KL AF +S A  G+AGA  A            + 
Sbjct: 203 VFGRTLLAIRDNEARAAAAGYDVRRFKLVAFVISGAVTGLAGALHALMTGIAPLSNIDYH 262

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            + +++ + ++GG  +L       A  +   +    +   +   L     + ++ 
Sbjct: 263 TSEMILVMTVIGGTGNLFASVLGAAAYVLFADWLSTLWPRWLLLLGLVLIAVSLF 317


>gi|294102414|ref|YP_003554272.1| inner-membrane translocator [Aminobacterium colombiense DSM 12261]
 gi|293617394|gb|ADE57548.1| inner-membrane translocator [Aminobacterium colombiense DSM 12261]
          Length = 348

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 59/337 (17%), Positives = 114/337 (33%), Gaps = 7/337 (2%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K    +  L  +  L LFL+        Y   +   + +  + A  L+++ G  G+ SL 
Sbjct: 4   KTRNFILNLCGIGVLGLFLYWAQGNLDGYKIQVLNLVAVNAILALSLNLIYGFTGMFSLG 63

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                AIGAY   IL           + +   I     +I     +      L  +   +
Sbjct: 64  HAGFMAIGAYVCAILILSPAQK--QALWILEPIIWPFSVIGAPFVVAVFIGGLIASFFGL 121

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 + +    +     G     R+     T  +                + Y  LL 
Sbjct: 122 LIAIPVLRLGGDYLGIATLGFAEIIRVVLTNLTPITNGALGIKGIPSYANIWWNYGWLLF 181

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
               +   ++    +   N  + IRD++ A  ++       ++ +F + + F G+ GA  
Sbjct: 182 ----TLYFMVKFLNSNFGNVLKAIRDDEIAAKNMGIDTFRYRVISFTIGAFFAGIGGALM 237

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +    I P MF F     V+ I + GG+ SLS     + I+  ++E    +        
Sbjct: 238 GSLITTIDPKMFIFLLTFNVLMITVAGGLGSLSGSILGSFIITILLEWLRFVENPLTIGS 297

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
            +           +  +AL  +IL R   ++ +R  +
Sbjct: 298 FEIP-GIPGMRMVIFSLALIFIILFRREGIMGMREIT 333


>gi|118588902|ref|ZP_01546309.1| possible branched-chain amino acid ABC transporter, permease
           protein [Stappia aggregata IAM 12614]
 gi|118438231|gb|EAV44865.1| possible branched-chain amino acid ABC transporter, permease
           protein [Stappia aggregata IAM 12614]
          Length = 358

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 56/315 (17%), Positives = 113/315 (35%), Gaps = 15/315 (4%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
            +  +  I+ +FA G +I+ G  G LS        +G+Y+ V      G++    + ++ 
Sbjct: 17  DLLQKFAIFGLFATGFNILFGLTGYLSFGHAAFLGVGSYTAVWTFKLLGMNPIPAVIMAI 76

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK-WKPITNGKAG-IYVADRLYF 158
           + SG   + +G  SL+  G Y +I TL  +++  N+      PITNG+ G   +      
Sbjct: 77  IASGIFALAIGYVSLRRSGIYFSILTLAFAQMSYNLAYSVLTPITNGETGLRVLRSDPRL 136

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                              +     +Y    +  +   I   + R+      R ++ NQ 
Sbjct: 137 FDGNGGQEGPLIANLFGVEMTGWGGFYFCAIILLIGFFIAQRIFRSPFGIMLRAVKTNQN 196

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                        L+AF +S  + G+AGA    +      +  +++ +  V+ + ILGG 
Sbjct: 197 RMTYTGLNPRPYTLAAFVISGMYAGLAGALMCITDPLAGAERMQWTASGEVVLMTILGGA 256

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF-------------NMRHTTLMV 325
            +L       A++     +    N    + +  F   F                    + 
Sbjct: 257 GTLLGPIFGAALIKYFENIFSAFNEQTLHEIFSFLPDFIEGPVISVAGLFVGEGWHLTLG 316

Query: 326 IALFLVILMRSHSLL 340
           +   L+++     L+
Sbjct: 317 VLFMLIVIFLPGGLM 331


>gi|229590870|ref|YP_002872989.1| putative branched-chain amino acid ABC transporter permease
           [Pseudomonas fluorescens SBW25]
 gi|229362736|emb|CAY49646.1| putative branched-chain amino acid ABC transporter permease
           [Pseudomonas fluorescens SBW25]
          Length = 355

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 68/337 (20%), Positives = 132/337 (39%), Gaps = 16/337 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +   +     F  L    +  +  ++ + +L+  +   GL+++ G  G LSL      A+
Sbjct: 27  IGLWLLLGFAFFALPWLGNDYWFSAILVPLLVLSLAGLGLNLLTGYAGQLSLGSAAFMAV 86

Query: 77  GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GA++   +     GL + +   +  +I+    ++ GLPSL+ +G YL +ATL    + + 
Sbjct: 87  GAFAAYNLHLRVPGLPLLVSFALGGVIAALVAVLFGLPSLRIKGFYLLVATLAAQFVVEW 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L ++   TN  A   +                               Y + L +     
Sbjct: 147 VLTRFSWFTNDNASGVITSPPL-------------LVAGLDFSSPRGRYVLTLTLVAALF 193

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254
            +   L R+ +   W  +RD   A   +   ++  KL AFA+S  ++G+AG+ +A A   
Sbjct: 194 WLGKNLVRSELGRNWMAVRDMDTAAAVIGIRLLKTKLLAFAISGFYLGVAGSLWAFAYLG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            + P  F  S +  V+ I+I+GG+ S+       A ++    L   +       L+    
Sbjct: 254 TVEPHGFDLSRSFQVLFIIIIGGLGSVLGNFLGAAFIVLFPILLGNLFALLPAGLMDAGQ 313

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             N++   L    +   ++     L RL        R
Sbjct: 314 LENIQKM-LFGALIIAFLIKEPEGLARLWQRFRQRAR 349


>gi|283956414|ref|ZP_06373894.1| LOW QUALITY PROTEIN: branched-chain amino acid transport system
           permease protein [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283792134|gb|EFC30923.1| LOW QUALITY PROTEIN: branched-chain amino acid transport system
           permease protein [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 350

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 72/341 (21%), Positives = 126/341 (36%), Gaps = 47/341 (13%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-------- 83
                 Y  ++  QI I+++ A   +++ G  G  SL      AIGAY+  +        
Sbjct: 24  PYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIGAYAAALVLLSADAK 83

Query: 84  ------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                       + + +  S  L + V+ + S    +I+     + RGDYLAI TL    
Sbjct: 84  NDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGI 143

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +   I +  ITNG  G+    +                             Y   G+ 
Sbjct: 144 IIKIAAINFPSITNGSRGLVDIPQFS-------------------------TIYWTGGIA 178

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            ++  +IL +  +    A + IRD++ A  ++     + K  AF  S+   G+ G   A 
Sbjct: 179 IVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFGTSAFLEGVGGGLLAC 238

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN--SL 309
               +SP  F F     ++ I++LGG+ S +       ++IG  E    ++       SL
Sbjct: 239 LLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEWLRFLDELNIKIDSL 298

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                S       +  I L LV+L     ++     S+ + 
Sbjct: 299 NLDIQSTPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 339


>gi|254474368|ref|ZP_05087754.1| inner-membrane translocator [Ruegeria sp. R11]
 gi|214028611|gb|EEB69446.1| inner-membrane translocator [Ruegeria sp. R11]
          Length = 400

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 119/357 (33%), Gaps = 29/357 (8%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
             L L A              +       +  + +I+ +FA G +I+ G  G LS     
Sbjct: 16  AFLTLFAPFILNPFPEGSAMAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYLSFGHAA 75

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
              +G+Y+ V +     +++   I +S +++G   +++G  SL+  G Y +I TL  +++
Sbjct: 76  FLGVGSYAAVWMFKLLSMNVIPAIILSVIVAGLFSLLIGFVSLRRSGIYFSILTLAFAQM 135

Query: 133 FQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
              +                     P   G +     +        +     F     S+
Sbjct: 136 MFALAYSVLTPITGGETGLQLALDDPRILGSSQTPEGNIPVPGLFGMEMRDSFDLELGSW 195

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
           V      YY    +   S  + + + R+      R ++ NQ+             L+AF 
Sbjct: 196 VFTFNIGYYFCALVLIASFYLAIRIFRSPFGMMLRAVKSNQQRMNYTGLNTRPYTLAAFV 255

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           +S  + G+AG   A+       +  +++ +  V+ + ILGG  +L         +     
Sbjct: 256 ISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLGAGFIKYFEN 315

Query: 297 LCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVILMRSHSLL 340
           +   +N    +    F                        + I   +V++     L+
Sbjct: 316 IFSKINATILHEWFAFLPDGLEDFIVAILYPFIGKGWHLTLGILFMMVVIFLPGGLV 372


>gi|241663462|ref|YP_002981822.1| urea ABC transporter permease protein UrtB [Ralstonia pickettii
           12D]
 gi|240865489|gb|ACS63150.1| urea ABC transporter, permease protein UrtB [Ralstonia pickettii
           12D]
          Length = 543

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 79/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ + +              +     +        
Sbjct: 269 ITYGLIGVINMAHGEFLMIGAYATYVVQTIFRNYFPNAFDWYLPAALPAAFLAAAVVGFA 328

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         +        +     S +         +
Sbjct: 329 LER--LVLRHLYGRPLETLLATFGISLLLMQAVRSIFGAQNVEVANPSWMSGGIALYPGL 386

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       +LL    + A     L RT +    R    N+     +          AFA 
Sbjct: 387 VLPYNRLVILLFALAVVAIAWAVLNRTRLGLFVRATTQNRTMAACVGVRTWKVDSYAFAF 446

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  L+        L  + + 
Sbjct: 447 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTIIGAFGLGLINKF 504

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                    ++++ + L I  R   L  L+  S  
Sbjct: 505 IEPFYGAVLAK-------------IIVLVLIVLFIQKRPQGLFALKGRSAE 542


>gi|121612562|ref|YP_001000695.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni 81-176]
 gi|87249165|gb|EAQ72126.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 350

 Score =   99 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 75/355 (21%), Positives = 135/355 (38%), Gaps = 47/355 (13%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L  +   ++F+F+       Y  ++  QI I+++ A   +++ G  G  SL      AIG
Sbjct: 10  LIFLIASIVFIFVSPYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIG 69

Query: 78  AYSYVI--------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           AY+  +                    + + +  S  L + V+ + S    +I+     + 
Sbjct: 70  AYAAALVLLSADAKNDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRV 129

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL    I +   I +  ITNG  G+    +                      
Sbjct: 130 RGDYLAIVTLGFGIIIKIAAINFPSITNGSRGLVDIPQFS-------------------- 169

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                  Y   G+  ++  +IL +  +    A + IRD++ A  ++     + K  AF+ 
Sbjct: 170 -----TIYWTGGIAIVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFST 224

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           S+   G+ G   A     +SP  F F     ++ I++LGG+ S +       ++IG  E 
Sbjct: 225 SAFLEGVGGGLLACLLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEW 284

Query: 298 CCGMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              ++       SL     S       +  I L LV+L     ++     S+ + 
Sbjct: 285 LRFLDELNIKIDSLNLDIQSMPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 339


>gi|254440285|ref|ZP_05053779.1| amino acid or sugar ABC transport system, permease protein,
           putative [Octadecabacter antarcticus 307]
 gi|198255731|gb|EDY80045.1| amino acid or sugar ABC transport system, permease protein,
           putative [Octadecabacter antarcticus 307]
          Length = 358

 Score =   99 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 82/344 (23%), Positives = 141/344 (40%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F +  ++Y     L         +L +    +  + +++ +  LIY + A GL+I+ G  
Sbjct: 20  FPIAFDRYRYWAILA------FAYLVIPFLINDYWANAILVPFLIYAIAAIGLNILTGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAYS   ++ S   +SI + + ++  I+   G   GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYSCYKLMTSFPDVSILIHVILAGGITAIVGAAFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  K     N  A   ++             + F    +        
Sbjct: 134 AVATLAAQFFLVWLFNKVSWFYNYSASGQISAP---------ERLVFGAAVTGPNTEPWV 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y V L    + A I   L R  +  +W  IRD   A   +    + AKL+AFAVSS FI
Sbjct: 185 QYMVCLVFVTICAIIARNLTRGTLGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFI 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F +         D F   ++ +V+ ++ILGG+ S+       A L+ +  L   
Sbjct: 245 GISGALFFSVYLGAVEVGDAFGIQKSFLVLFMIILGGLGSIFGSFAGAAFLVLLPVLLKV 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +               +     ++   +   ++   H L +L  
Sbjct: 305 VGVDLLGWPTDL---VSHLRLVIIGALIMFFLIKEPHGLAQLWR 345


>gi|126741261|ref|ZP_01756940.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
 gi|126717666|gb|EBA14389.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
          Length = 400

 Score =   99 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 62/363 (17%), Positives = 128/363 (35%), Gaps = 32/363 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +   I+ +L +  P +L  F   +   ++      +  + +I+ +FA G +I+ G  G L
Sbjct: 10  RMLMIVAILTLCAPFILNPFPTDSALAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYL 69

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S        +G+YS V +     +++   I +S +I+G   +++G  SL+  G Y +I T
Sbjct: 70  SFGHAAFLGVGSYSAVWMFKLLSMNVVPAIMLSVVIAGIFALLIGYVSLRRSGIYFSILT 129

Query: 127 LIMSEIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
           L  +++  N+                     P   G +              +     F 
Sbjct: 130 LAFAQMSFNLAYSVLTPITNGETGLQLTLEDPRVLGVSATADGSIPVTNLFGLEMRSTFE 189

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                +       YY+   +   S  + + + R+      R ++ NQ+            
Sbjct: 190 MAVGPWAFQFNAGYYLCALILLASFYLSIRIFRSPFGMMLRAVKSNQQRMNYTGLNSRPY 249

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
            L+AF +S  + G+AG   A+       +  +++ +  V+ + ILGG  +L         
Sbjct: 250 TLAAFVISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLGAGF 309

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVILMRSH 337
           +     +   +N    +S   F                        + I   LV++    
Sbjct: 310 IKYFENIFSKINDNVLHSWFSFMPDGMEDFVVFVIHPFIGKGWHLTLGILFMLVVIFLPG 369

Query: 338 SLL 340
            L+
Sbjct: 370 GLV 372


>gi|148243965|ref|YP_001220204.1| inner-membrane translocator [Acidiphilium cryptum JF-5]
 gi|146400528|gb|ABQ29062.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Acidiphilium cryptum JF-5]
          Length = 328

 Score =   99 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 64/325 (19%), Positives = 126/325 (38%), Gaps = 26/325 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           + A +  L L        +      +  ++L+Y M A GL++++G  G LS      + +
Sbjct: 22  ISAAIIWLALLFVPIWLPAIGGFTDLASRVLVYAMAATGLNLLLGYTGGLSFGHAAYFGL 81

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY   +       S+ L +    ++ G  G+++G   +K +G Y A+ T+   ++F  +
Sbjct: 82  GAYGTGLFIIHVIPSMPLALIAGTLLGGIGGILVGPMVMKRKGIYFAMITIAFGQMFYFL 141

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            ++W  +T G+ G            T  S +       +  +     YYV+L +  +   
Sbjct: 142 AVRWNTVTGGEDG-----------LTGFSRVPLHLGGEAINLGPARFYYVVLALFAVVML 190

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++  + R+ + +A+   R+N      L   +      AFA+S+    +AG+  A      
Sbjct: 191 VVWQILRSPMGHAFVATRENTTRLRFLGVAVDKQVWVAFAISAFITALAGSLNAMLTAFA 250

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SPD  ++  +   + I +LGGM S         I I   +    +               
Sbjct: 251 SPDDLQWQLSGSFVVICVLGGMRSFWGPFLGAVIYIAAQDYLSSV--------------- 295

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                + + +   L +L     LL 
Sbjct: 296 TQNWMSFIGLIFVLSVLFFPQGLLG 320


>gi|306823908|ref|ZP_07457282.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Bifidobacterium dentium
           ATCC 27679]
 gi|309802403|ref|ZP_07696510.1| branched-chain amino acid ABC transporter, permease protein
           [Bifidobacterium dentium JCVIHMP022]
 gi|304552906|gb|EFM40819.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Bifidobacterium dentium
           ATCC 27679]
 gi|308221003|gb|EFO77308.1| branched-chain amino acid ABC transporter, permease protein
           [Bifidobacterium dentium JCVIHMP022]
          Length = 469

 Score =   99 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 97/305 (31%), Gaps = 28/305 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I  L+  + + G+++V G+ GL S +      +G     +      + +      + +I
Sbjct: 189 IIFGLMLGLMSVGMNLVYGTTGLQSFSHGEQVTLGGLMAYVGTQMLHMPVVASAIFAIVI 248

Query: 103 SGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
               G+I          R     +  +I++      L        G     +        
Sbjct: 249 GAITGLIQNEIVWGPLRRRHVGTMQQMIVTIGLSMALQYTFQFFFGGDIKGIV------- 301

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                      F    +  ++      L    +   + L+L +T +  A R + DN    
Sbjct: 302 -----KSVPDSFQLGPITTDMPTLLSALIAICVIIGVTLFLYKTRLGRATRAVSDNAALA 356

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +    +       + +S +   ++G       + IS +    +  +++ + V LGG+ +
Sbjct: 357 AASGINVDQVVRVVWILSCSMAALSGVLLGIYLNGISWNT-GATLILLMFAAVTLGGLGT 415

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
            +     + ++  V ++   +               N       +  L +V+L+R   + 
Sbjct: 416 ANGALIGSLVIGIVADMSSLVIP-------------NDMRYASALAILIIVLLVRPQGIF 462

Query: 341 RLRTP 345
             +  
Sbjct: 463 GKQQR 467


>gi|91787289|ref|YP_548241.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91696514|gb|ABE43343.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas sp. JS666]
          Length = 524

 Score =   99 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 93/310 (30%), Gaps = 17/310 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I S      I ++ A GL+I  G +G++++       IGAY+  ++   +   +      
Sbjct: 231 IFSGISLGSILLLVALGLAITYGLMGVINMAHGELMMIGAYATYVVQGLFQKYLPGAFDW 290

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +     +             ++   +     + +L  W      +  +        
Sbjct: 291 YLLAAVPVAFLASALMGAALER--SVIRFLYGRPLETLLATWGISLMLQQLVRSIFGAQN 348

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G      +         +        ++     +   +   + RT +    R +  N+ 
Sbjct: 349 VGVENPVWMSGGVQVLGNLSLPYNRLVIIGFAIAVLLGMAWLISRTRLGLFVRGVTQNRP 408

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +          AFA+ S   G+AG   A S+             +    +V+LGG+
Sbjct: 409 IASCMGVNTARVDTYAFALGSGIAGLAGC--ALSQVGNVGPDLGQGYIVDSFMVVVLGGV 466

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L+    A   L  + +   G                       +++ + + I  R   
Sbjct: 467 GQLAGTVYAAMGLGILNKFLEGWTGAVLAK-------------IAVLVFIIIFIQKRPQG 513

Query: 339 LLRLRTPSNF 348
           +  ++  S  
Sbjct: 514 IFAMKGRSAE 523


>gi|254227653|ref|ZP_04921084.1| amino acid or sugar ABC transport systems, permease protein,
           putative [Vibrio sp. Ex25]
 gi|262395701|ref|YP_003287554.1| branched-chain amino acid transport system permease protein livM
           [Vibrio sp. Ex25]
 gi|151939695|gb|EDN58522.1| amino acid or sugar ABC transport systems, permease protein,
           putative [Vibrio sp. Ex25]
 gi|262339295|gb|ACY53089.1| branched-chain amino acid transport system permease protein livM
           [Vibrio sp. Ex25]
          Length = 355

 Score =   99 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 61/322 (18%), Positives = 128/322 (39%), Gaps = 17/322 (5%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +    ++ +         Y  ++ IQI    + A GL+I+VG  G +SL     +  GA+
Sbjct: 31  LAIAGVIAMLAAPLVLDIYFLNLFIQIAYLGIAALGLNILVGFTGQISLGHGAFFGFGAF 90

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +   L +++ + +   IP++  ++   GM+ GLP+ + +G YLAIATL    I ++   +
Sbjct: 91  ASAWLNNQFNIPVVFAIPLAGYLTMIVGMLFGLPAARIKGLYLAIATLAAQFILEDFFAR 150

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
               + G  G        F                         +Y+ L           
Sbjct: 151 ADWFSGGSYGAGANPINLFGFEFTTDE---------------SFFYIALFALIFMYMWAS 195

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L R+    A+ ++RD+  +   +   +   +L +F V + + G+ GA +      +S +
Sbjct: 196 NLIRSRDGRAFVSVRDHYLSAEIMGINLTKYRLLSFGVCAFYAGIGGALYGHYLGFVSAE 255

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG--MNFYYFNSLLKFDCSFN 317
            F    +I  ++++I+GG+ S+      T  ++ + E+          F++   F     
Sbjct: 256 GFTIMMSIQFLAMIIIGGLGSVKGTLMGTIFIVLLPEVLEFGVTGLAAFSNNTSFVDGLA 315

Query: 318 MRHTTLMVIALFLVILMRSHSL 339
                 + + + L ++     L
Sbjct: 316 YFKEMAIGLVIMLFLIFEPQGL 337


>gi|86150505|ref|ZP_01068730.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88596131|ref|ZP_01099368.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562632|ref|YP_002344411.1| branched-chain amino-acid ABC transporter permease [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|85839100|gb|EAQ56364.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88190972|gb|EAQ94944.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360338|emb|CAL35134.1| branched-chain amino-acid ABC transport system permease protein
           [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|284926246|gb|ADC28598.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315058459|gb|ADT72788.1| Branched-chain amino acid transport system permease protein livM
           [Campylobacter jejuni subsp. jejuni S3]
 gi|315930766|gb|EFV09770.1| branched-chain amino acid transport system / permease component
           family protein [Campylobacter jejuni subsp. jejuni 305]
          Length = 350

 Score =   99 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 72/341 (21%), Positives = 127/341 (37%), Gaps = 47/341 (13%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-------- 83
                 Y  ++  QI I+++ A   +++ G  G  SL      AIGAY+  +        
Sbjct: 24  PYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIGAYAAALVLLSADAK 83

Query: 84  ------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                       + + +  S  L + V+ + S    +I+     + RGDYLAI TL    
Sbjct: 84  NDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGI 143

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +   I +  ITNG  G+    +                             Y   G+ 
Sbjct: 144 IIKIAAINFPSITNGSRGLVDIPQFS-------------------------TIYWTGGIA 178

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            ++  +IL +  +    A + IRD++ A  ++     + K  AF+ S+   G+ G   A 
Sbjct: 179 IVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFSTSAFLEGVGGGLLAC 238

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN--SL 309
               +SP  F F     ++ I++LGG+ S +       ++IG  E    ++       SL
Sbjct: 239 LLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEWLRFLDELNIKIDSL 298

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                S       +  I L LV+L     ++     S+ + 
Sbjct: 299 NLDIQSTPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 339


>gi|153952098|ref|YP_001397905.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. doylei 269.97]
 gi|152939544|gb|ABS44285.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. doylei 269.97]
          Length = 350

 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 72/341 (21%), Positives = 127/341 (37%), Gaps = 47/341 (13%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-------- 83
                 Y  ++  QI I+++ A   +++ G  G  SL      AIGAY+  +        
Sbjct: 24  PYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIGAYAATLVLLSADAK 83

Query: 84  ------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                       + + +  S  L + V+ + S    +I+     + RGDYLAI TL    
Sbjct: 84  NDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGI 143

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +   I +  ITNG  G+    +                             Y   G+ 
Sbjct: 144 IIKIAAINFPSITNGSRGLVDIPQFS-------------------------TIYWTGGIA 178

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            ++  +IL +  +    A + IRD++ A  ++     + K  AF+ S+   G+ G   A 
Sbjct: 179 IVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFSTSAFLEGVGGGLLAC 238

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN--SL 309
               +SP  F F     ++ I++LGG+ S +       ++IG  E    ++       SL
Sbjct: 239 LLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEWLRFLDELNIKIDSL 298

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                S       +  I L LV+L     ++     S+ + 
Sbjct: 299 NLDIQSTPGFRMVVFSIVLILVMLFARKGIMGYDELSDVIR 339


>gi|294341705|emb|CAZ90124.1| putative High-affinity branched-chain amino acid transport protein,
           ATP binding component [Thiomonas sp. 3As]
          Length = 592

 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 46/321 (14%), Positives = 109/321 (33%), Gaps = 22/321 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +   +L L +       Y   M   + + V+   GL ++ G  GL S        +GAY+
Sbjct: 7   LIAFILALCIAPFMLHGYPMLMLNYVGLSVIVVLGLVLLTGVGGLTSFGQAAFVGMGAYA 66

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
              L +    + WL +    +++    +++G  +L+  G YL ++TL             
Sbjct: 67  AAWLTTTQDWNPWLTLLAGLLLTTVAAVVLGWVTLRMSGHYLPLSTLAWGIAIYLTFGNS 126

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +  G+ GI     L   G  +    +F                ++  +       +  
Sbjct: 127 QTL-GGQTGITGIPPLSLFGWQLTESWQFH--------------ILIWAVVLSIIWTVHN 171

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +  +    A R ++       ++       K+  F +++ +  +AG  +A  +  ++P  
Sbjct: 172 MLDSREGRAMRALKGGTLMAEAMGVNTTRFKIILFVLAAQYACVAGWIYAYMQRFVNPTP 231

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F   + I  + + ++GG+  L      + +     E               F+       
Sbjct: 232 FSLGQGIEYLFMGVVGGIAELWGGVVGSFLYALPREWLHSHLPSLLGRSGSFEG------ 285

Query: 321 TTLMVIALFLVILMRSHSLLR 341
             +  + + +++      L  
Sbjct: 286 -IIFGVLMIIILQRAPEGLWP 305


>gi|113867096|ref|YP_725585.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
 gi|113525872|emb|CAJ92217.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
          Length = 547

 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 79/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ S +              +     +        
Sbjct: 273 ITYGLIGVINMAHGEFLMIGAYATYVVQSLFRAYAPGAFDWYLPAALPASFLAAALVGFV 332

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         +        +     + +         +
Sbjct: 333 LER--LVLRHLYGRPLETLLATFGVSLLLMQAVRTLFGAQNVEVANPAWMSGGIEWMPGL 390

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++L    + A     L RT +    R    N+     +          AFA 
Sbjct: 391 VIPYNRIVIILFALAVVAVAWAVLNRTRLGLFVRATTQNRTMAACVGVRTWKVDSYAFAF 450

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          +  I    +V+LGG+  L+        L  + + 
Sbjct: 451 GAGIAGLGGC--ALSQIGNVGPDLGQAYIIDSFMVVVLGGVGQLAGTIVGAFGLGIINKF 508

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   L  L+  S  
Sbjct: 509 IEPFYGAVLAK-------------IFVLVLIVLFIQKRPQGLFALKGRSAE 546


>gi|86607099|ref|YP_475862.1| hydrophobic amino acid ABC transporter permease [Synechococcus sp.
           JA-3-3Ab]
 gi|86555641|gb|ABD00599.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Synechococcus sp. JA-3-3Ab]
          Length = 319

 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 71/318 (22%), Positives = 128/318 (40%), Gaps = 26/318 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------Y 88
            Y     + + IY +   GL+I  G  G+ ++     +A+GAY+  I  +         +
Sbjct: 3   SYAIFFLVLVGIYGVLVLGLNIQWGYAGMFNIGVGAFFAVGAYASAIATTPPTPEHLGGF 62

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            L  W+   ++ + +GA   ++GL +LK R DYLAIAT+ ++EI   IL     +TNG  
Sbjct: 63  DLPFWVGFAMAVVAAGAIAFLIGLITLKLRSDYLAIATIGIAEIISQILKNEGWLTNGVR 122

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           GI    R +      +  + +       +    ++                   R+    
Sbjct: 123 GITRIPRPFRGWIPGQDTLLYLGLVLLVLAVVYWL--------------SERAYRSPWGR 168

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE-NI 267
             R IR+++ A  +    ++  +L AF + S  +G+AGA +A   + ISP+ F+      
Sbjct: 169 VLRAIREDEPAALAAGKDVLQFRLQAFVLGSMLMGLAGALYAHFVNFISPEAFQPEFATF 228

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           IV  ++I GG  +         ++ GV      +                +    +++  
Sbjct: 229 IVWVMLIAGGSGNNRGALLGALVIWGVWSGSEWLTNRLPPQWATRAGPLRILLIGILLQV 288

Query: 328 LFLVILMRSHSLLRLRTP 345
           + L    RS  LL  R P
Sbjct: 289 ILLT---RSQGLLPERPP 303


>gi|107028473|ref|YP_625568.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054]
 gi|116686468|ref|YP_839715.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
 gi|105897637|gb|ABF80595.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652183|gb|ABK12822.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 347

 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 57/313 (18%), Positives = 124/313 (39%), Gaps = 12/313 (3%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           RL  +  +L        ++    L    S     S+  ++L++ + A G ++++G  GLL
Sbjct: 17  RLRPWRGLLQRPEGWLAVVAACVLPLVLSSG---SLATEVLVFALAALGCNLLLGYTGLL 73

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S    I + +G+Y+  ++ +R   S+ + +  +A++      ++G  S++ RG Y  + T
Sbjct: 74  SFGQGIFFGLGSYAAGLVLTRGVASVSVALLAAAVLGAVAAALVGWFSIRQRGTYFVMLT 133

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   ++F  +      +T G  G+    R           +  F  P   +      Y  
Sbjct: 134 LAFGQLFYFLAYTTPDVTGGDNGLLDIPRPA---------LAAFGHPLVALDSPWRYYGF 184

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +      ++L + R+        IRDN+    +    +   KL+AF +S A  G+AG
Sbjct: 185 VAVLFVAVFWLLLRVSRSVFGRTLLAIRDNEARAAAAGYDVKRFKLAAFVISGAVTGLAG 244

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A  A            +  + +++ + ++GG  +L       A  +   +    +   + 
Sbjct: 245 ALHALMTGIAPLSNIDYHTSEMILVMTVIGGTGNLFASVLGAAFYVLFADWLSTLWPRWL 304

Query: 307 NSLLKFDCSFNMR 319
             L     + ++ 
Sbjct: 305 LLLGLVLIAVSLF 317


>gi|119025089|ref|YP_908934.1| branched-chain amino acid transport system permease protein
           [Bifidobacterium adolescentis ATCC 15703]
 gi|154486424|ref|ZP_02027831.1| hypothetical protein BIFADO_00238 [Bifidobacterium adolescentis
           L2-32]
 gi|118764673|dbj|BAF38852.1| branched-chain amino acid transport system permease protein
           [Bifidobacterium adolescentis ATCC 15703]
 gi|154084287|gb|EDN83332.1| hypothetical protein BIFADO_00238 [Bifidobacterium adolescentis
           L2-32]
          Length = 327

 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 63/313 (20%), Positives = 122/313 (38%), Gaps = 8/313 (2%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           +      YV+ A GL+I  G  GL+++       +GAY + I     G +++  +  +  
Sbjct: 15  IAPTTAAYVLAAIGLNIHFGMTGLMNMGQAGFMLLGAYGFAI-TQSMGCNLFASVCAALA 73

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIYVADRLYFL 159
           ++    +++G+P+LK   DYLA+ TL  +EI + I         T G AGI   D     
Sbjct: 74  LAVIYALLLGIPTLKLGPDYLAMVTLAAAEIIRIIGRSTAMTNFTGGSAGISPQDFTEKF 133

Query: 160 ----GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                    S        S+ +    ++  V   +  ++A +      +      + IR+
Sbjct: 134 ESLSPLPDGSTTFLLWTYSNNIANSWWLRIVAWVLVVIAALLCWRWFHSPWGRMLKGIRE 193

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  SL   +   K+ +  +   F  +AG  F      + PD    +    V +I++L
Sbjct: 194 DENAIRSLGKPVTRYKMESLILGGLFGAIAGIIFVLP-RSVQPDSLGRTVTFYVWTILLL 252

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  ++      + +L  ++     +        L            ++ +AL  +++ R
Sbjct: 253 GGAATILGPVLGSCVLWVLLTFVKEVMRNTVPETLISSNQIEALGWVIVGVALMCLVIFR 312

Query: 336 SHSLLRLRTPSNF 348
              LL  R    F
Sbjct: 313 PQGLLGDRKELAF 325


>gi|146277041|ref|YP_001167200.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025]
 gi|145555282|gb|ABP69895.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025]
          Length = 642

 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 101/321 (31%), Gaps = 26/321 (8%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGS 86
           +G  ++            IY + A GL+I  G + ++++       +GAY+  +     +
Sbjct: 343 VGLMQAADLALDAVSLASIYFLAAIGLAITFGVMRVINMAHGEFIMMGAYTGYVVQQWIA 402

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            Y +SI + +P++  ++ A G+ M    +        + TL+ +      L +      G
Sbjct: 403 DYTISILVALPLAFAVTFAAGVAMERLVI-RHLYRRPLETLLATFGISIALQQLAKNIFG 461

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                +              +      +  V        + +         ++ ++RT +
Sbjct: 462 TQARPLTAP---------GWLDGALSFNDVVSISYIRIAIFVLALIFLGVFLIIMKRTRL 512

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R +  N     S+        +  F + S   G+AG          S     +   
Sbjct: 513 GLEVRAVTQNPSMAASMGINPDRINMLTFGLGSGIAGVAGVAIGLFAKVTSELGQDYIVQ 572

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
                 V++GG+ ++       A++ G  +    +N     +   +     +        
Sbjct: 573 S--FMTVVVGGVGNIWGTLAGAAMIGGAQKGIEWLNPSNTLAAQTYMILLIIIFIQF--- 627

Query: 327 ALFLVILMRSHSLLRLRTPSN 347
                   R   ++ LR  + 
Sbjct: 628 --------RPRGIIALRGRAA 640


>gi|320335001|ref|YP_004171712.1| ABC transporter integral membrane subunit [Deinococcus maricopensis
           DSM 21211]
 gi|319756290|gb|ADV68047.1| ABC-type transporter, integral membrane subunit [Deinococcus
           maricopensis DSM 21211]
          Length = 541

 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 72/302 (23%), Positives = 132/302 (43%), Gaps = 5/302 (1%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            ++GL+      GL      +     A +  +         WL + +S   +   G+++G
Sbjct: 201 ISFGLASFGLVAGLTLTGRALLVLNAAKAQGLATGLDAGFFWLFLALSIFAAAVMGVLIG 260

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           LP L+ +GDYLAI TL + E+ + +       TNG  G               +    F 
Sbjct: 261 LPVLRLKGDYLAIITLGLGEVIRVLANNLTLYTNGSQGTPPIKSASVPWLDALAGRLGFS 320

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                +    F+Y+++L +  L   + + L R+ I  AW  IRD++ A  ++   ++  K
Sbjct: 321 PDQYPL---FFLYFLVLIIISLIILVNIRLDRSRIGRAWIAIRDDEVAAQAMGIPLMRTK 377

Query: 232 LSAFAVSSAFIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           L AFA  ++F G+ G  FAA     I+P+ F  +++I V+S+VILGGM S+  +    A+
Sbjct: 378 LIAFATGASFAGIMGMIFAAKQAATITPESFVLNQSIGVLSMVILGGMGSIPGVILGAAV 437

Query: 291 LIGV-VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
           +  + + +   +     N  +    +       +  + L + +L R   LL  +  +  L
Sbjct: 438 VTLLNLSILPSLGEATANMNIPQQVNPAQLQRLVFGVILVVAMLFRPEGLLPNQRQAMQL 497

Query: 350 ER 351
             
Sbjct: 498 HE 499



 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/78 (34%), Positives = 37/78 (47%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
               +    + V    LL +   A +    +    IQI I+   A GL+IVVG  GLL L
Sbjct: 70  RWRTQPWAKVLVGAACLLLVLPWAGRDNTSLFDTAIQIGIFAALALGLNIVVGLAGLLDL 129

Query: 69  NCVIAYAIGAYSYVILGS 86
             V  +A+GAY + I GS
Sbjct: 130 GYVAFFAVGAYMWGIFGS 147


>gi|328545194|ref|YP_004305303.1| Hydrophobic amino acid ABC transporter (HAAT) family, permease
           [polymorphum gilvum SL003B-26A1]
 gi|326414936|gb|ADZ71999.1| Hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Polymorphum gilvum SL003B-26A1]
          Length = 320

 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 72/315 (22%), Positives = 127/315 (40%), Gaps = 26/315 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------Y 88
            Y   MG+ I IY + A GL+I  G  GL ++     +A+GAY+  IL S         +
Sbjct: 8   NYALFMGVFIGIYALLALGLNIQWGYSGLFNVGIAGFFAVGAYTSAILTSPHAAGRIGGF 67

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            L  ++    + + +G     +G   L+FR DYLAIAT+ ++EI + ++     +TN   
Sbjct: 68  ELPFFVGWLGAMLAAGLIAWPIGKICLRFRSDYLAIATIGVAEIIRLVIKSEPALTNAAR 127

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           GI    R +     V S +                  ++L +  ++  ++          
Sbjct: 128 GITGIPRPFGDLPYVESQM--------------AYLAIVLVVLAVAYVMLERQFNAPWGR 173

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK-FSENI 267
             R IRDN+ A  ++   I + +L AF   +A +G+ GA FA     I+P+         
Sbjct: 174 MMRAIRDNENAAQAMGKDIAYRRLEAFVFGAALMGLGGALFAHFNRSITPEAIDPMIATF 233

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +V  ++ILGG  +         ++  +  +             ++          L+ + 
Sbjct: 234 LVWIMLILGGSGNNRGAILGALVVWTIWSVSEIATD---RLPHEYAIKAKYIRVFLIGLM 290

Query: 328 LFLVILMRSHSLLRL 342
           L  V+  R   LL  
Sbjct: 291 LQFVLRFRPEGLLPE 305


>gi|322417902|ref|YP_004197125.1| inner-membrane translocator [Geobacter sp. M18]
 gi|320124289|gb|ADW11849.1| inner-membrane translocator [Geobacter sp. M18]
          Length = 334

 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 56/326 (17%), Positives = 119/326 (36%), Gaps = 34/326 (10%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             +   +   L L       ++  +  + ++++  A    ++ G  G L+      + IG
Sbjct: 9   AILAIIVAALLILPLVVHDTFVLRVVTEGIMWIGLAIAFDVIAGYTGYLNFGHGAFFGIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL  +  L  W  +P   + +    +I G+P+L+ +G Y AIAT  +S   Q + 
Sbjct: 69  AYTIGILMMQAHLPFWAALPAGGVAAAIVALIAGIPTLRLKGAYFAIATWALSRAIQQLA 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +  + IT G  G+                        +F+  + F Y +   +      +
Sbjct: 129 LNME-ITGGPDGMR---------------------LDAFLNPQFFYYLMFFTVGGTFLLL 166

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L R       + IR++++   +L       K+ +F +S+   G+ G  +A     I 
Sbjct: 167 WYLLERAPFGLKLKAIREDEEGAKALGLNPTKLKMQSFILSALPTGILGGIYAYWITFID 226

Query: 258 PDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P        +   + +V+ GGM +L   A    ++     L                  F
Sbjct: 227 PSSTLGDMVSDQAVVMVVFGGMGTLFGPALGAILIFAFKTLFWAYL-----------SDF 275

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
            + +  ++   + + ++   + L   
Sbjct: 276 QLLYLIILGALIAISVIFIPNGLWGT 301


>gi|114766073|ref|ZP_01445082.1| branched-chain amino acid ABC transporter, permease protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114541628|gb|EAU44669.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. HTCC2601]
          Length = 400

 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 60/378 (15%), Positives = 126/378 (33%), Gaps = 36/378 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKS------QKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           +   +  ++AV+     F+                   +  + +I+ + A G +I+ G  
Sbjct: 7   RDLTLFLIVAVMALFAPFILNPFPTDSGMAQFNAGYPDLMQRFVIFGILAIGFNILFGLT 66

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G LS        +G+Y+ V +     +++   I +S ++SG   +++G  SL+  G Y +
Sbjct: 67  GYLSFGHAAFLGVGSYAAVWMFKLLSMNVIPAILLSMIVSGLFAVVIGYVSLRRSGIYFS 126

Query: 124 IATLIMSEIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVRSLI 167
           I TL  +++  N+                     P   G +              +    
Sbjct: 127 ILTLAFAQMSYNLAYSVLTPITNGETGLQITLDDPRILGVSATADGGIPVTNLFGLEMRS 186

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                   +       YYV   +  +S  I + + R+      R I+ NQ   +      
Sbjct: 187 FETLNIGPWAFQFSVGYYVAAVIMLISFYIAIRIFRSPFGMMLRAIKSNQNRLYYTGLNA 246

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
               L+AF +S  + G+AG   A        +  +++ +  V+ + ILGG  +L      
Sbjct: 247 RPYTLAAFVISGMYAGLAGGLLACMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLG 306

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVILM 334
              +     +   +N    +  + F                        + +   L+++ 
Sbjct: 307 AGFIKYFENIFSKINDQVVHGWVSFLPDGLEDLVVALIHPFVGKGWHLTLGLMFMLIVIF 366

Query: 335 RSHSLL-RLRTPSNFLER 351
               L+   +  S  L R
Sbjct: 367 LPGGLVEGGQRISRRLRR 384


>gi|300697939|ref|YP_003748600.1| branched-chain amino acid ABC transporter permease [Ralstonia
           solanacearum CFBP2957]
 gi|299074663|emb|CBJ54220.1| putative ABC-type branched-chain amino acid transport system,
           permease component [Ralstonia solanacearum CFBP2957]
          Length = 322

 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 55/303 (18%), Positives = 119/303 (39%), Gaps = 24/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             ++G ++L+  + A  ++ ++G  G+LS      + +GAY           S  L +  
Sbjct: 36  YTALGTRVLVLGLAAMSVNFLLGFTGVLSFGHAAYFGLGAYGAGFALKFLAPSTPLALVC 95

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ G  G ++G  S++ RG Y A+ T+   ++F  I  +W  +T G  G+    R+  
Sbjct: 96  GTLLGGIAGALLGALSVRRRGVYFAMVTIAFGQVFYYIAFQWSSLTGGDDGLRGFSRMP- 154

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +         +      YY +L    L+  ++ ++ R+   +    IR+N++
Sbjct: 155 --------LDLGFTTLDILSNADAFYYFVLACLALATGLMAFVLRSPFGHTLIAIRENER 206

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +      AF +S  F+G AGA +A   +   P    +S++   + + ++GGM
Sbjct: 207 RARFLGIPVNRHIWIAFTLSCFFMGFAGALYALLNNFADPRGLHYSQSGDFVMMAVMGGM 266

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         + + + +    +                +   + + +    ++L     
Sbjct: 267 RSFWGPLLGAVVFVVLQDYLSSL---------------TVNWMSFVGMLFVAIVLFFPRG 311

Query: 339 LLR 341
           LL 
Sbjct: 312 LLG 314


>gi|73541025|ref|YP_295545.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72118438|gb|AAZ60701.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 363

 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 65/329 (19%), Positives = 127/329 (38%), Gaps = 26/329 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L     L     L    S K+   +  +++I  +FA  L +++G  GL+SL     +
Sbjct: 18  FAWLVAFALLASLPLLLTADSHKFYIELLSKVMIMAIFALSLQLLIGYTGLVSLGHAAYF 77

Query: 75  AIGAYSYVILG-SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           A  AY+  IL       + WLL+  +   + A  +++G+  L+ RG Y  + TL  +++ 
Sbjct: 78  AAAAYATAILAPEAGPGNGWLLLAGALGAAAALAVLVGMLVLRTRGVYFIMVTLAFAQMV 137

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +      I  G  G Y+  R  F                  V      Y+++     +
Sbjct: 138 YFVFHD-TKIAGGSDGTYIYFRPEFPVP---------GTQQLTVNDPSHFYWMVWAAMGV 187

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  ++  L R+   +A   IR N++   +        +L AF       G+AG  +A   
Sbjct: 188 TVVVLTLLLRSRFGHALVGIRHNEQRMRAAGYATYRYQLGAFVAGGMLAGLAGFLYAIQF 247

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             ++P++  + ++   + +VILGG+ SL+         + + E    M  ++        
Sbjct: 248 GFVNPEIASWHQSGNAMLMVILGGVGSLAGAVLGAFSFVLLAEWFSTMTRHW-------- 299

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                    LM   + + + +    L+ L
Sbjct: 300 -------QLLMGGFIIVAVALLPRGLVSL 321


>gi|114766292|ref|ZP_01445279.1| branched-chain amino acid ABC transporter, permease protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114541493|gb|EAU44538.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. HTCC2601]
          Length = 358

 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 80/329 (24%), Positives = 140/329 (42%), Gaps = 13/329 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L  V     ++      S+    ++ I ILIY + A GL+I+ G  G LSL       
Sbjct: 26  AFLLAVILAFAWVIFPLMASEFAFQTLLIPILIYSLAALGLNILTGYAGQLSLGTAAFMG 85

Query: 76  IGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           +GAY+   ++     L+  + I  S + S   G+  G+PSL+ +G YLAIATL       
Sbjct: 86  VGAYACYKMVTLMPWLNPVVAILFSGVFSAGVGVAFGIPSLRIKGFYLAIATLAAQFFLV 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  KW  + N                 V +L  F  + +         YYV+L +  L 
Sbjct: 146 WLFEKWGWLYNYN---------ASGAIQVPNLEMFGVYVAGPQASSTVQYYVVLAIVTLL 196

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASR 253
             + + L R  +   W+  RD   A   +   ++ +KL+AFAVSS  +G+AGA F    R
Sbjct: 197 TLLCINLTRGNLGRTWKATRDMDIAAELIGINLMRSKLTAFAVSSYVVGVAGALFVFMWR 256

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
               P++F    +  ++ I I+GG+ S+        +++G+  +   +       +    
Sbjct: 257 GAAEPNLFDIPLSFRILFIAIIGGLGSILGNYLGAILIVGLPVVLNTLPEAL--GIPISS 314

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +    +  ++   +   +++  H L RL
Sbjct: 315 ATVEHLNIMIVGSLIIFFLIIEPHGLARL 343


>gi|84684359|ref|ZP_01012260.1| ABC branched amino acid transporter family, inner membrane subunit
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84667338|gb|EAQ13807.1| ABC branched amino acid transporter family, inner membrane subunit
           [Rhodobacterales bacterium HTCC2654]
          Length = 358

 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 78/342 (22%), Positives = 141/342 (41%), Gaps = 21/342 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++ ++    + +       +  + +    +  + +++ +  LIY + A GL+++ G  
Sbjct: 20  FPIKFDRIAYYVLIA------VALIVVPFVINDYWANAVLLPFLIYAIAALGLNVLTGYA 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ S   ++I+  I +S  I+   GM+ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYASYKLMTSFPDVNIFFHIILSGGITALVGMLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  +     N                +V     F    +        
Sbjct: 134 AVATLAAQFFLVWLFNRVPWFYNYS---------ASGQISVPERAVFGIKVTGPQTEAWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L   FLSA I+  L R +    W  IRD   A   +    + AKLSAFAVSS F+
Sbjct: 185 TYLFCLVFVFLSAWIVRNLTRGSTGRKWMAIRDMDIAAEIIGVNPLTAKLSAFAVSSFFV 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G+AGA F +         + F   ++ +V+ ++I+GG+ S+       A ++ +  L   
Sbjct: 245 GVAGALFFSVYLGAVEVGEAFGIQKSFLVLFMIIIGGLGSIFGSFAGAAFMVLMPVLLKN 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                                 ++   +   +++  H L  L
Sbjct: 305 TLVGGLGWATDLA---AHLEFMIVGGLILFFLIVEPHGLAAL 343


>gi|163855434|ref|YP_001629732.1| high-affinity branched-chain amino acid transport system permease
           protein [Bordetella petrii DSM 12804]
 gi|163259162|emb|CAP41462.1| high-affinity branched-chain amino acid transport system permease
           protein [Bordetella petrii]
          Length = 350

 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 62/321 (19%), Positives = 126/321 (39%), Gaps = 15/321 (4%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +    LF+       +  I ++   +LI V+   GL I  G  G ++L       +GAY+
Sbjct: 27  LVLFALFMMAMPLLFEPRIVAIVTTMLITVVVVLGLQINTGLAGQINLGQAAFMGVGAYT 86

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             IL S+ G  IW  +PV  + +   G I G+ +++ +G YLA+ T+    +F  +++  
Sbjct: 87  TAILASKAGWPIWAALPVGGVAAAVFGFIFGMSAVRIKGFYLALTTIAAQILFHFLVLNL 146

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
                G +          LG    S                 +YY+ L +  L       
Sbjct: 147 PASWLGGSAGITVQPAEILGFRFDSDR--------------SIYYLCLAVAALMLFGAYS 192

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           + R+    A+  +RD+  A   +   ++  K  AF + + + G+ G  +A     ++ D 
Sbjct: 193 VARSRHGRAFLAVRDDDVASGMMGINVVRTKAVAFLLGAFYAGIGGGLWAYYVRFVAVDQ 252

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F    +I +I+++I+GG+ S++       ++    E+           +           
Sbjct: 253 FTLFHSIWLIAMIIVGGVGSITGALIGVLVIKLSQEIISSAGSTIVELVPFLGGDIVFAA 312

Query: 321 TTLMVIALFL-VILMRSHSLL 340
             + + A+    ++     L+
Sbjct: 313 MNIFLGAMIAGFLIFEPRGLM 333


>gi|159042935|ref|YP_001531729.1| high-affinity branched-chain amino acid transport system permease
           livM [Dinoroseobacter shibae DFL 12]
 gi|157910695|gb|ABV92128.1| high-affinity branched-chain amino acid transport system permease
           protein livM [Dinoroseobacter shibae DFL 12]
          Length = 358

 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 78/342 (22%), Positives = 140/342 (40%), Gaps = 21/342 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F +  ++    L L   V        +    +  +  ++ +  LI+ + A GL+I+ G  
Sbjct: 20  FPIAFDRMRYYLVLAVAV------GIIPFVINDYWASAVMVPFLIWAIAAIGLNILTGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ +   L+I + + +  +I+ A G++ GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKLMTAFPDLNIAICVLLGGVITAAVGVLFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  K     N                       F    +        
Sbjct: 134 AVATLAAQFFLVWLFNKVPWFYNYS---------ASGQINAPERTMFGYAITGPNADAAP 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   L   F+ A +   L R  I  +W  IRD   A   +    + AKL+AFAVSS F+
Sbjct: 185 KYLFCLAFLFVLAWLARNLTRGTIGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFV 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G+AGA F +         + F  +++ +V+ ++I+GG+ S+       A ++ +  L   
Sbjct: 245 GVAGALFFSVYLGAVEVGEAFGINQSFLVLFMIIIGGLGSIFGSLAGAAFIVLLPVLLKN 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +              F      ++   +   +++  H L RL
Sbjct: 305 VMVGSLGWDTAIAAHF---EFVVLGGLIIFFLIVEPHGLARL 343


>gi|327441688|dbj|BAK18053.1| ABC-type branched-chain amino acid transport system, permease
           component [Solibacillus silvestris StLB046]
          Length = 341

 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 56/328 (17%), Positives = 121/328 (36%), Gaps = 31/328 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L     + +   L      + +  +  Q  I+ + A    I++G  G++S    + + IG
Sbjct: 13  LVYAVVVGVMAVLPFVLDSRTMTILLTQFCIFAILAMSYDILLGYTGIISFGHAMFFGIG 72

Query: 78  AYSYVILGSRYGL---SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AY+  I+ S YG         I V  ++S    +I G  +L+ +  + A+ TL +S +F 
Sbjct: 73  AYTTAIMLSDYGPSIGIFAASIVVGIVLSAIISVISGALTLRLKSHFYAMFTLAVSGLFL 132

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  KW+ +T G  G        F                      ++ Y+++L    + 
Sbjct: 133 VLAEKWRTVTKGNDGFTFRAPELFRER-------------------LYFYFLVLICLVVI 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             ++  +  +        IR+N++   SL    +  K+ A  ++ +   +AG+ +A S  
Sbjct: 174 FILLKRIVASPFGKVLVAIRENEQRTRSLGFKTLGYKIIASVIAGSVASLAGSLYAISLR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++  +      +  + + I+GG+ +L        ++        G+           D 
Sbjct: 234 FVNTSVLTMDITLDALMMTIIGGVGTLIGPIIGAGVIEFAQHYLSGLAR---------DY 284

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
               R      I   L ++     ++  
Sbjct: 285 PIFERWIIFFGILYILAVIFFPRGIVGT 312


>gi|229493044|ref|ZP_04386839.1| ABC amino acid transporter, ATP-binding [Rhodococcus erythropolis
           SK121]
 gi|229320074|gb|EEN85900.1| ABC amino acid transporter, ATP-binding [Rhodococcus erythropolis
           SK121]
          Length = 616

 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 60/275 (21%), Positives = 113/275 (41%), Gaps = 15/275 (5%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
              I  +   GL++ +G  G L+L     YA GAY+  ++       I L +  S  ++ 
Sbjct: 42  LACILALVVSGLNLSLGFAGELALGQAAMYAAGAYTAGLMSQAGHTDILLQLAASGAVAL 101

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
           A G++ G+P L+     LA+ +  +  +  ++L  +   T G+ G+   +   F G+ + 
Sbjct: 102 AVGILTGVPGLRLGNWSLAMTSFFLVLLVPDVLAIFGGKTGGRNGLTGMEPPTFFGSELD 161

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           +                  Y V++ +  L  +++  L  +    A+RT++ +     S  
Sbjct: 162 TQQY---------------YMVVVVVTVLWFAVMRNLVVSRHGIAFRTLKQSPVLASSQG 206

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
            ++   KL  +A+ +   G+AGA FA +   ISP+ F F+    V++  ILGG  S+   
Sbjct: 207 VSVFRMKLLGYAIGAFPAGLAGALFANTDLFISPEAFGFTFATAVLAASILGGAASVYGA 266

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
               AI+            Y       F     + 
Sbjct: 267 VVGAAIMQLGPNQSTAFQEYSLIFYGGFLIIGGVL 301


>gi|170735069|ref|YP_001774183.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
 gi|169821107|gb|ACA95688.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
          Length = 347

 Score = 99.6 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 54/298 (18%), Positives = 119/298 (39%), Gaps = 12/298 (4%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             ++    L    S     S+  ++L++ + A G ++++G  GLLS    I + +G+Y+ 
Sbjct: 32  LAVVAACVLPLVLSSG---SLATEVLVFALAALGCNLLLGYTGLLSFGQGIFFGLGSYAA 88

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            ++ +R   S+ + +  +A++      ++G  S++ RG Y  + TL   ++F  +     
Sbjct: 89  GLVLTRGVASVSVALLAAAVLGAVAAALVGWFSIRQRGTYFVMLTLAFGQLFYFLAYTTP 148

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G  G+    R           +  F  P   +      Y  +  +      ++L +
Sbjct: 149 DVTGGDNGLLDIPRPA---------LAAFGHPIVALDSPWRYYGFVAVLFVAVFWLLLRV 199

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R+        IRDN+    +    +   KL+AF +S A  G+AGA  A           
Sbjct: 200 SRSVFGRTLLAIRDNEARAAAAGYDVKRFKLAAFVISGAVTGLAGALHALMTGIAPLSNI 259

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            +  + +++ + ++GG  +L       A  +   +    +   +   L     + ++ 
Sbjct: 260 DYHTSEMILVMTVIGGTGNLFASVLGAAFYVLFADWLSTLWPRWLLLLGLVLIAVSLF 317


>gi|260426778|ref|ZP_05780757.1| inner-membrane translocator [Citreicella sp. SE45]
 gi|260421270|gb|EEX14521.1| inner-membrane translocator [Citreicella sp. SE45]
          Length = 400

 Score = 99.6 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 62/369 (16%), Positives = 125/369 (33%), Gaps = 36/369 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYID-------SMGIQILIYVMFAWGLSIVV 60
           L K D  L L+  V  L     L    +   +         +  + +I+ + A G +I+ 
Sbjct: 4   LGKKDVTLFLIVAVMALFAPFILNPFPTDSGLAQFNAGYPDLMQRFVIFGILAIGFNILF 63

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G LS        +G+Y+ V +     +++   I +S ++SG   +++G  SL+  G 
Sbjct: 64  GLTGYLSFGHAAFLGVGSYAAVWMFKLLSMNVLPAIVLSMVVSGLFAVVIGYVSLRRSGI 123

Query: 121 YLAIATLIMSEIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVR 164
           Y +I TL  +++  N+                     P   G++              + 
Sbjct: 124 YFSILTLAFAQMSYNLAYSVLTPVTNGETGLQITLDDPRVLGQSATADGGIPVTNLFGLE 183

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
                      +       YYV   +  +S  + + + R+      R IR NQ   +   
Sbjct: 184 MRSFETLEIGPWAFQFSVGYYVAAVIMLISFYLAIRIFRSPFGMTLRAIRSNQNRLYYTG 243

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                  L+AF +S  + G+AG   A        +  +++ +  V+ + ILGG  +L   
Sbjct: 244 LNARPYTLAAFVISGMYAGLAGGLLACMDPLAGAERMQWTASGEVVLMTILGGAGTLIGP 303

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLV 331
                 +     +   +N    +  + F                        + +   L+
Sbjct: 304 VLGAGFIKYFENIFSKINDQVVHGWVSFLPDGLEDFVVALIHPFVGKGWHLTLGLMFMLI 363

Query: 332 ILMRSHSLL 340
           ++     L+
Sbjct: 364 VIFLPGGLV 372


>gi|296137411|ref|YP_003644653.1| ABC transporter related protein [Thiomonas intermedia K12]
 gi|295797533|gb|ADG32323.1| ABC transporter related protein [Thiomonas intermedia K12]
          Length = 592

 Score = 99.6 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 47/321 (14%), Positives = 111/321 (34%), Gaps = 22/321 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +   +L L +       Y   M   + + V+   GL ++ G  GL S        +GAY+
Sbjct: 7   LIAFILALCIAPFMLHGYPMLMLNYVGLSVIVVLGLVLLTGVGGLTSFGQAAFVGMGAYA 66

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
              L +    + WL +    +++    +++G  +L+  G YL ++TL        +    
Sbjct: 67  AAWLTTTQDWNPWLTLLAGLLLTTVAAVVLGWVTLRMSGHYLPLSTLAWGIAIYLMFGNS 126

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +  G+ GI     L   G  +    +F                ++ G+       +  
Sbjct: 127 QTL-GGQTGITGIPPLSLFGWQLTESWQFH--------------ILIWGVVLSIIWTVHN 171

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +  +    A R ++       ++       K+  F +++ +  +AG  +A  +  ++P  
Sbjct: 172 MLDSREGRAMRALKGGTLMAEAMGVNTTRFKIILFVLAAQYACVAGWIYAYMQRFVNPTP 231

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F   + I  + + ++GG+  L      + +     E               F+       
Sbjct: 232 FSLGQGIEYLFMGVVGGIAELWGGVVGSFLYALPREWLHSHLPSLLGRSGSFEG------ 285

Query: 321 TTLMVIALFLVILMRSHSLLR 341
             +  + + +++      L  
Sbjct: 286 -IIFGVLMIIILQRAPEGLWP 305


>gi|163792961|ref|ZP_02186937.1| hypothetical protein BAL199_24269 [alpha proteobacterium BAL199]
 gi|159181607|gb|EDP66119.1| hypothetical protein BAL199_24269 [alpha proteobacterium BAL199]
          Length = 540

 Score = 99.6 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 93/297 (31%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       IGAY   ++      S   L  VS +I+     +  
Sbjct: 261 AAIGLAITFGVMGVINMAHGEMVMIGAYVTFMVQEVIRTSAPALFDVSLLIALPLAFLTA 320

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       I   +     + +L  W      +  +              S      
Sbjct: 321 GAVGVVIER--GIIRWLYGRPLETLLATWGLSLVLQQAVRSIFGPTNREVGAPSW-MSGA 377

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++++    +   +++ L+RTA     R +  N++   S+     +  
Sbjct: 378 FELGGLTLTYGRVWIIVFAIAVFILLLVVLKRTAFGLQMRAVTQNRRMASSMGIRTTWVD 437

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   A S+          S  I    +V+ GG+ +L         L
Sbjct: 438 ALTFGLGSGVAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGALTL 495

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             V +                          L+++ + L I  R   +  L+  +  
Sbjct: 496 GVVNKFLEPYAGAVLGK-------------ILVLVFIILFIQKRPRGMFALKGRAVE 539


>gi|281413035|ref|YP_003347114.1| inner-membrane translocator [Thermotoga naphthophila RKU-10]
 gi|281374138|gb|ADA67700.1| inner-membrane translocator [Thermotoga naphthophila RKU-10]
          Length = 358

 Score = 99.6 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 63/361 (17%), Positives = 130/361 (36%), Gaps = 47/361 (13%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +L+     +  +  +  + L L+L       Y   +   I IY + A  L+++ G  G+ 
Sbjct: 6   KLSARTNFILTVVFLIFMALLLYLADRYMDSYKLRVVRLIAIYGIMAVSLNLINGITGIF 65

Query: 67  SLNCVIAYAIGAYSYVI-------------------LGSRYGLSIWLLIPVSAMISGACG 107
           SL       IGAY+  +                     +      +       +++    
Sbjct: 66  SLGHAGFILIGAYTASLLTLSPEQKAMSFIIEPIVPWLANVHTDFFTATVAGGVLAAVFA 125

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
            ++G P L+  GDYLAIA+L  +E+ + I +    ITNG  G+                 
Sbjct: 126 FLIGWPVLRLSGDYLAIASLGFAEVIRIIALNAIRITNGPLGLKGIP------------- 172

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                       E    +   G  F++   I  L  ++   A + IR+++ A  ++   +
Sbjct: 173 ------------EYSNIWWCYGWLFVTVLFIASLVNSSYGRALKAIREDRIAAEAMGINV 220

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIA 285
              +L +F + + F G++G+ +A     I P            V+ +++LGG+ S+S   
Sbjct: 221 FKHQLLSFVIGAFFAGVSGSLYAHWLTTIDPRTTTLGPMLTFYVLIMIVLGGLGSISGSL 280

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
              A+   + E    +   +    +            ++     LV++     ++     
Sbjct: 281 IGAALFAILFEWLRDLEEPFTFFGIHVP-GIKGMRILVISAIFILVMIFWQRGIMGREEL 339

Query: 346 S 346
           +
Sbjct: 340 T 340


>gi|119382933|ref|YP_913989.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119372700|gb|ABL68293.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 333

 Score = 99.6 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 56/329 (17%), Positives = 126/329 (38%), Gaps = 30/329 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++    ++  L +  F  A     +   + ++ +I  + A  L+ ++G  GL+SL   + 
Sbjct: 28  LVAAFVILAALAVAPFALAAIGHDFWTDVILRAMILGIAAVSLNFIIGLGGLVSLGHAVF 87

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             IG YS  IL      +    +  + + S A   + G+ +L+ RG +  + TL  +++ 
Sbjct: 88  LGIGGYSVGILADLGIDNGPAQLGAALLFSAAFAWLTGMIALRTRGVHFIMITLAFAQMV 147

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
              ++  +                       ++     F    +  +  +YYV+L +   
Sbjct: 148 YFTMMGLRQFGG---------------DDGLTINYSTTFGPLDLGDKDVLYYVVLAVLGA 192

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +      +RR+      +  + N++   ++       +L+A+  +    G+AG   A   
Sbjct: 193 AMLGFARVRRSDFGLLLKAAKGNERRVSAVGFNAYRYRLAAYVAAGTLCGLAGFLDANFT 252

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             ++P    +  +  +I IVI+GG+ S+S       + + + E   G+  Y+        
Sbjct: 253 GFVTPSAMSWISSGELIFIVIVGGIASVSGPIAGALVFLLIEEWMGGLTVYWH------- 305

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                       + L  +IL   + L+ L
Sbjct: 306 --------FWFGLFLIAIILFARNGLVGL 326


>gi|302343145|ref|YP_003807674.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075]
 gi|301639758|gb|ADK85080.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075]
          Length = 349

 Score = 99.6 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 71/341 (20%), Positives = 137/341 (40%), Gaps = 24/341 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
                L++ L +       Y      Q+ I V+ A GL+++VG  G +SL     +AIGA
Sbjct: 21  FWFIALIVALGVFPLFGDSYQIYTVNQMAINVIVALGLNLLVGYTGQISLGHAGFFAIGA 80

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y  +++  + GL   + +P++ ++S   G ++GLP+L+  G YLAIATL        IL 
Sbjct: 81  YGTLVMMIKLGLPFVVALPLAGLLSALFGFLLGLPALRLEGPYLAIATLGFGLTITQILG 140

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           + +                     +                +   Y V++ +  + A  +
Sbjct: 141 RIEYFGG----------------HMGIQAPPLEIFGWTATSDAARYAVIMPIAVIMALAM 184

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L +T +  A+  IRD++ A   +   I + K  AFAVS+ F G+AG   A     I+P
Sbjct: 185 RNLIKTRVGRAFVAIRDSEIAAECIGVNITYYKTLAFAVSAFFTGIAGGLMAFVLGFINP 244

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY--------YFNSLL 310
             F    +++ +S+V++GG+ S+        ++  + +    ++            +   
Sbjct: 245 HTFNLMTSVLFLSMVVVGGLGSILGSVMGAVLITYLGQELAQISELPVIGHALMELSQQF 304

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                       +  + + L+++     L      +    R
Sbjct: 305 LSINGLPNVQFVIFGLIMVLIVIFEPLGLYGFWIRTKIYWR 345


>gi|284165018|ref|YP_003403297.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511]
 gi|284014673|gb|ADB60624.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511]
          Length = 449

 Score = 99.6 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 66/391 (16%), Positives = 124/391 (31%), Gaps = 54/391 (13%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +     +  V   + L L          +  M   I +Y M    L++  G  GL ++  
Sbjct: 28  FVAFAAIYLVYAAIGLALGYSLDGIVNTLRRMTYLIAVYGMVTLALNLHWGYTGLFNIGV 87

Query: 71  VIAYAIGAYSYVILGSRYGL-----------SIWLLIPVSAMISGACGMIMGLPSLKFRG 119
               AIG Y  ++L                  + + I    + +G  G+++ +P+L+ R 
Sbjct: 88  AGFMAIGLYVTMMLAKPVDPTGAAQYPGLGLPMPIAIAGGVVAAGLAGLVVAIPALRLRA 147

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           DY AI T+  +EI +  L           G  +        T          F       
Sbjct: 148 DYFAITTIAFAEIVRLGLTSGMAQQFSVLGAELGTGGGRGLTRNYGDPMNVIFELEAFSS 207

Query: 180 EI-----------------FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
            +                     VL+ +      +I    R+      + IR++++A  S
Sbjct: 208 FVDLTNALFGFGPTQARALVYSIVLVLVLIGFYWLIQRTSRSPFGRVLKAIREDEEAAQS 267

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L       K+  F +  A +G+AG  +   R  ++P  F+      +   +I+GG  S +
Sbjct: 268 LGKNTNRFKIKVFVLGCALMGLAGILWRVRRTGVTPTAFRPHVTFYIWIALIIGGAGSNT 327

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCS--------------------------F 316
                + + + V+             ++    +                          F
Sbjct: 328 GSVLGSGLFVAVLFEGPRYVRRLIEEVITVGDAPNTFAGAVAPLLSANPAPFLRYTFDEF 387

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                 LM +AL L++  R   LL  R  + 
Sbjct: 388 LTLQFVLMGVALVLLMHRRPDGLLGHREETA 418


>gi|251781859|ref|YP_002996161.1| putative branched chain amino acid ABC transporter permease
           [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
 gi|242390488|dbj|BAH80947.1| putative branched chain amino acid ABC transporter, permease
           protein [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
 gi|323126673|gb|ADX23970.1| branched-chain amino acid transport system permease protein
           [Streptococcus dysgalactiae subsp. equisimilis ATCC
           12394]
          Length = 317

 Score = 99.6 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 76/343 (22%), Positives = 139/343 (40%), Gaps = 42/343 (12%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           + +K       +  +  L+L L +G      Y   + + I I ++ A G ++V+G  G  
Sbjct: 3   KEHKALLAWIFILALVYLILTLLIGTDILGPYYVQILMGIGIAIIMAMGTNLVLGFSGQF 62

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            L      A+GAY+  IL          +L + V  +++G   +I+G P+L+ +GDYLAI
Sbjct: 63  PLGQAGFMAVGAYATAILTKYMPTYLGFYLSMLVGVLVAGLIAVIVGFPTLRLKGDYLAI 122

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           ATL ++EI +  +I    +TNG AG                            + +   +
Sbjct: 123 ATLGVAEIIRIAIINGGELTNGAAG-------------------------LTGVLQYTSW 157

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            V+     + A ++L   R+A       +R+++ A  S+       K+  FA+++    M
Sbjct: 158 PVVYAFVVVIAIVMLNFIRSATGRQVIAVREDEIAAESMGVNTTKIKVITFALAAMTASM 217

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG+ +      + P  F    +I  + I +LGG+ S++    A  +L  +          
Sbjct: 218 AGSLYVGYIGTVVPKDFTIMRSIDYLIIAVLGGLGSMTGTIVAAIVLGLLNMYLQNF--- 274

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                       +     +  +AL LV++ R   LL  R    
Sbjct: 275 ------------SDVRMIIYSLALILVMVFRPGGLLGTREFRL 305


>gi|205355775|ref|ZP_03222544.1| putative branched chain amino-acid ABC transport system permease
           protein [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205346209|gb|EDZ32843.1| putative branched chain amino-acid ABC transport system permease
           protein [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 350

 Score = 99.6 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 74/355 (20%), Positives = 134/355 (37%), Gaps = 47/355 (13%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L  +   ++F+F        Y  ++  QI I+++ A   +++ G  G  SL      AIG
Sbjct: 10  LIFLIASIIFIFTSPYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIG 69

Query: 78  AYSYVI--------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           AY   +                    + + +  S  L + ++ + S    +I+     + 
Sbjct: 70  AYVAALVLLSADAKNDQFFLDGPSSFILAIHSNSFILALIMAGICSSLLALILAFAVFRV 129

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL    I +   I +  ITNG  G+    +                      
Sbjct: 130 RGDYLAIVTLGFGIIIKIAAINFPSITNGSRGLVDIPQFS-------------------- 169

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                  Y   G+  ++  +IL +  +    A + IRD++ A  ++     + K  AF+ 
Sbjct: 170 -----TIYWTGGIAIVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFST 224

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           S+   G+ G   A     +SP  F F     ++ I++LGG+ S +       ++IG  E 
Sbjct: 225 SAFLEGVGGGLLACLLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEW 284

Query: 298 CCGMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              ++       SL  +  S       +  I L LV+L     ++     S+ + 
Sbjct: 285 LRFLDELNIKIDSLNLYIQSTPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 339


>gi|254464476|ref|ZP_05077887.1| inner-membrane translocator [Rhodobacterales bacterium Y4I]
 gi|206685384|gb|EDZ45866.1| inner-membrane translocator [Rhodobacterales bacterium Y4I]
          Length = 401

 Score = 99.6 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 59/366 (16%), Positives = 126/366 (34%), Gaps = 35/366 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKS------QKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           +   +L ++A++     F+                   +  + +I+ +FA G +I+ G  
Sbjct: 7   RDTSLLIIVAILTLFAPFILNPFPTGSAMAQFNAGYPDLMQRFVIFGIFAIGFNILFGLT 66

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G LS        +G+YS V +    G+++   I +S +++G   +++G  SL+  G Y +
Sbjct: 67  GYLSFGHAAFLGVGSYSAVWMFKLIGMNVIPAIVLSVIVAGLFALLIGFISLRRSGIYFS 126

Query: 124 IATLIMSEIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVRSLI 167
           I TL  +++  N+                     P   G +              +    
Sbjct: 127 ILTLAFAQMSFNLAYSVLTPVTNGETGLQLTLEDPRILGVSATADGSIPVTNLFGLEMRS 186

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
            F      +       YY+   +   +  + + + R+      R ++ NQ+         
Sbjct: 187 TFELAVGPWAFQFNAGYYLCALIMLAAFYLAIRIFRSPFGMMLRAVKSNQQRMNYTGLNT 246

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
               L+AF +S  + G+AG   A+       +  +++ +  V+ + ILGG  +L      
Sbjct: 247 RPYTLAAFVISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLG 306

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVILM 334
              +     +   +N    +S   F                        + I   LV++ 
Sbjct: 307 AGFIKYFENIFSKINDNVLHSWFSFLPDGMEDAVVFLIHPFIGKGWHLTLGILFMLVVIF 366

Query: 335 RSHSLL 340
               L+
Sbjct: 367 LPGGLV 372


>gi|154248071|ref|YP_001419029.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154162156|gb|ABS69372.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 545

 Score = 99.6 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 91/297 (30%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++      S   L   S  I+     +  
Sbjct: 266 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQDFIRHSAPGLFDWSLAIALPLAFLFT 325

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       +   +     + +L  W      +  +              S      
Sbjct: 326 GLVGILIER--TVIRFLYGRPLETLLATWGVSLILQQAVRSVFGPTNQEVGAPSW-MSGA 382

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++++    +  +++L L+RT +    R +  N++   ++        
Sbjct: 383 FQVGQLSITYNRLWIIVFALLVFFALLLVLKRTPLGLYVRAVTQNRRMAAAMGIRTGRID 442

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   A S+             I    +V+ GG+ +L         L
Sbjct: 443 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTLVGAFTL 500

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +L                         L+++ + L I  R   L  L+  +  
Sbjct: 501 GIANKLLEPFAGAVLGK-------------ILLLVFIILFIQKRPRGLFALKGRAVE 544


>gi|260437003|ref|ZP_05790819.1| high-affinity branched-chain amino acid transport system
           permeaseprotein BraE [Butyrivibrio crossotus DSM 2876]
 gi|292810312|gb|EFF69517.1| high-affinity branched-chain amino acid transport system
           permeaseprotein BraE [Butyrivibrio crossotus DSM 2876]
          Length = 361

 Score = 99.6 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 65/320 (20%), Positives = 132/320 (41%), Gaps = 24/320 (7%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
            ++     +      +  + ++I ++ + A  L++VVG LG LSL       +GA++  +
Sbjct: 25  FVMNTLNNSGVLSNVMSGLLVRICVWSIMAVSLNLVVGILGELSLGHAGFMYVGAFTGSL 84

Query: 84  LGSRYGLS-------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                            + I + A+ +   G+++G   L+ +GDYLAI TL   EI + I
Sbjct: 85  FTQITADMISNDLLRFVIGILIGAVTAAIFGILIGSAVLRLQGDYLAIVTLAFGEIIKGI 144

Query: 137 LIKWKPITNGKAGIYVADRLYF--LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           L       + K   +  +              I          I     + + + +  ++
Sbjct: 145 LGTVIVAFDSKGFHFSLNNTTDLIGKGVKSEDIIVKGSQGILKIQRSSTFLIGIILLIIT 204

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I++ L  +    A + +RDN+ A  ++   I   +L AF +S+A  G+AG  ++ +  
Sbjct: 205 VLIVMNLSDSRSGRAIKAVRDNRIATETVGINISKFRLLAFTISAALAGVAGVLYSHNLG 264

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            + P  F F+ +I V+ +V+LGGM ++     A  +L  + E    +N Y          
Sbjct: 265 MLQPSKFDFNTSINVLVMVVLGGMGNIPGSIVAAIVLTILPEKMRFLNDY---------- 314

Query: 315 SFNMRHTTLMVIALFLVILM 334
                   +  + L ++++ 
Sbjct: 315 -----RMIIYAVVLIVLMIF 329


>gi|218296917|ref|ZP_03497612.1| inner-membrane translocator [Thermus aquaticus Y51MC23]
 gi|218242797|gb|EED09332.1| inner-membrane translocator [Thermus aquaticus Y51MC23]
          Length = 356

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 67/306 (21%), Positives = 116/306 (37%), Gaps = 35/306 (11%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y   +     I+ ++A    ++ G  G +SL     + +  Y   ILG   GL  WL 
Sbjct: 46  DPYWLRVLTLTAIFALYAASWDLLSGYTGQVSLGHAFFFGLSGYVSAILGRELGLPPWLT 105

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +P+ A ++   G+ +GLPSL+ RG YL++ TL    I   ++  +  IT G+ G+    R
Sbjct: 106 VPLGASLAALAGVFVGLPSLRVRGPYLSLVTLAFPIIALGLVFVFPKITGGELGLSGLPR 165

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           L                           YY+++    LS   +  L  + I      IR+
Sbjct: 166 LGQNRLQE--------------------YYIVVFTFLLSTLFLWKLGGSRIGLFLHAIRE 205

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A   +    +  KL AF  S+ F G+AG   A     + PD      +I  I   + 
Sbjct: 206 DEVAVRMVGVNTVRYKLLAFGASAFFAGLAGGLHAHFLRVVGPDSLSVFNSIQPIVWSVF 265

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++      T +L  ++E    +                          + LV+   
Sbjct: 266 GGLATIYGPVAGTFLLFPLLEFLRVVEE---------------VRMVAFAFLILLVMRFL 310

Query: 336 SHSLLR 341
              ++R
Sbjct: 311 PQGVVR 316


>gi|167772146|ref|ZP_02444199.1| hypothetical protein ANACOL_03521 [Anaerotruncus colihominis DSM
           17241]
 gi|167665944|gb|EDS10074.1| hypothetical protein ANACOL_03521 [Anaerotruncus colihominis DSM
           17241]
          Length = 333

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 70/333 (21%), Positives = 141/333 (42%), Gaps = 29/333 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K  +IL    +V   L    +      KY+ ++    LIY +   G+ +++G  G++S  
Sbjct: 2   KKIRILRGTLLVTLALAAYLVLPNHLGKYMMTVMNSALIYFVVCLGIQVILGMGGMVSFA 61

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
            +    +GAY+  I   R GL I L +  + +IS    +++G+  L+ +G +   +T+ +
Sbjct: 62  AISFMGVGAYATAIFSMRAGLPILLSVAGAMVISALFALLIGMVLLRLKGTFFTFSTVAL 121

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            +I  ++   W+ +T G  GI         G   ++  +               Y VLL 
Sbjct: 122 VQITYSVFNNWRAVTGGPDGIAGVPNFSIGGLQAKTSDQN--------------YLVLLT 167

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              L A +++ LR+T +  A  ++RDN+ A   +   +   K++AF +++ F G+ GA  
Sbjct: 168 AAILCALVVVRLRKTNLGRALSSVRDNEIAAQVMGVNVYKTKVTAFVIAAIFAGLGGALM 227

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +   +    F F ++   + + +LGG+TS   +   T ++  + E    +  Y     
Sbjct: 228 THTNHFVGASSFTFDQSTTFVIMAMLGGVTSTPGVFVGTLLITMLPEWLKPLQEYI---- 283

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                           + + L+++     L  L
Sbjct: 284 -----------RLFYGLGVMLLMVFMPMGLAGL 305


>gi|51891939|ref|YP_074630.1| branched-chain amino acid ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
 gi|51855628|dbj|BAD39786.1| branched-chain amino acid ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
          Length = 341

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 63/280 (22%), Positives = 127/280 (45%), Gaps = 15/280 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            ++  +  + LI  + A GL+++ G  G +S+      AIGA++   L ++ G+  W  +
Sbjct: 26  SWLVLLTNRALILAIAAIGLNLLTGFAGQISIGHAAFMAIGAFASYGLTAKVGIPFWGAL 85

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++ +IS A G  +G P+L+ +G YLAIATL        IL  WK ++ G  G+  A   
Sbjct: 86  PLAGLISAAVGYALGFPALRLQGHYLAIATLGFGVAVPQILNLWKGLSGGWTGVKPAAPY 145

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
            +          ++    +  +                  + L + R     A+  +RD+
Sbjct: 146 LYGLYFKEDRPYYYLILIALALLT---------------WVALNIARRRTGRAFIALRDS 190

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             A  ++  ++   K +AFA+S+ + G+AG+ +A   + I+P  F  + ++ + +I++LG
Sbjct: 191 SVAAQAMGISLARYKTTAFALSAFYAGIAGSLWAHMMNYIAPHDFNLALSMELFTIIVLG 250

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           G+ S+      +  +  + +    ++     S       F
Sbjct: 251 GLASVPGSIVGSLFMSLMPKAVERISLALQRSGAFDHSPF 290


>gi|75759905|ref|ZP_00739977.1| Branched-chain amino acid transport system permease protein livM
           [Bacillus thuringiensis serovar israelensis ATCC 35646]
 gi|74492607|gb|EAO55751.1| Branched-chain amino acid transport system permease protein livM
           [Bacillus thuringiensis serovar israelensis ATCC 35646]
          Length = 340

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 59/334 (17%), Positives = 128/334 (38%), Gaps = 31/334 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 22  VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 81

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  R      +  + I  + ++S     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 82  VALLFDRQGVSITNFLIGIVAAIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 141

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YYV L        +
Sbjct: 142 EKWRGLTHGGDGFTFGVPEIFRDRF-------------------TFYYVSLVCLCFIFIL 182

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 183 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGIVAAISGGLFVITLRFVN 242

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L      + I+  +      +   Y            
Sbjct: 243 TTVFSIEMTLNALLMTMIGGVGTLIGAIAGSGIIESLKYYLSELATEY---------PIF 293

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            R T ++ +   +V+L+    L+         +R
Sbjct: 294 ERWTIILGLLYIIVLLVFPKGLVGTVKKLKGFKR 327


>gi|323141504|ref|ZP_08076392.1| branched-chain amino acid ABC transporter, permease protein
           [Phascolarctobacterium sp. YIT 12067]
 gi|322414020|gb|EFY04851.1| branched-chain amino acid ABC transporter, permease protein
           [Phascolarctobacterium sp. YIT 12067]
          Length = 319

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 68/342 (19%), Positives = 133/342 (38%), Gaps = 41/342 (11%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K+D    +  V+   ++   L       + +   I I I ++ A  L+++ G  G  S
Sbjct: 4   IRKFDLKAIVACVIVFGIVQGLLFGEIIGPFWELNIILICINIILAVSLNLINGYTGQFS 63

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           +      A+GAY+  I+  + G+     + V+ + +G  G ++GLP+L+  GDYLAIATL
Sbjct: 64  IGHAGFMAVGAYTSAIMTVKLGMPFEAGLVVATLAAGLLGFLIGLPTLRLDGDYLAIATL 123

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            + EI +  ++    +  G +G+    R+     T                         
Sbjct: 124 GLGEIIRICILNIDYV-GGASGLMGIPRMTNFAYTF------------------------ 158

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +       I   + ++       IR+N+ A  ++       K+ AF   +AF G AGA
Sbjct: 159 -WIMIAIIFFIKNFKNSSYGRCCLAIRENEIAADTMGINTTKYKVMAFTFGAAFAGTAGA 217

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            F+       P  F F  +  ++++V+LGG+ S++       +L  +             
Sbjct: 218 LFSHYFFLAHPASFTFMRSFDILTMVVLGGLGSMTGAITGATLLTFISAYLSDY------ 271

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
                          +  + + +++L R   L   +  S  +
Sbjct: 272 ---------PEWRMIIYSVTMIILMLYRPQGLFGSKELSLKM 304


>gi|254250447|ref|ZP_04943766.1| ABC-type branched-chain amino acid transport system, permease
           component [Burkholderia cenocepacia PC184]
 gi|124879581|gb|EAY66937.1| ABC-type branched-chain amino acid transport system, permease
           component [Burkholderia cenocepacia PC184]
          Length = 347

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 54/298 (18%), Positives = 119/298 (39%), Gaps = 12/298 (4%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             ++    L    S     S+  ++L++ + A G ++++G  GLLS    I + +G+Y+ 
Sbjct: 32  LAVVAACVLPLVLSSG---SLATEVLVFALAALGCNLLLGYTGLLSFGQGIFFGLGSYAA 88

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            ++ +R   S+ + +  +A++      ++G  S++ RG Y  + TL   ++F  +     
Sbjct: 89  GLVLTRGVASVSVALLAAAVLGAVAAALVGWFSIRQRGTYFVMLTLAFGQLFYFLAYTTP 148

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G  G+    R           +  F  P   +      Y  +  +      ++L +
Sbjct: 149 DVTGGDNGLLDIPRPA---------LAAFGHPLVALDSPWRYYGFVAVLFVAVFWLLLRV 199

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R+        IRDN+    +    +   KL+AF +S A  G+AGA  A           
Sbjct: 200 SRSVFGRTLLAIRDNEARAAAAGYDVKRFKLAAFVISGAVTGLAGALHALMTGIAPLSNI 259

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            +  + +++ + ++GG  +L       A  +   +    +   +   L     + ++ 
Sbjct: 260 DYHTSEMILVMTVIGGTGNLFASVLGAAFYVLFADWLSTLWPRWLLLLGLVLIAVSLF 317


>gi|294676776|ref|YP_003577391.1| urea ABC transporter permease UrtA [Rhodobacter capsulatus SB 1003]
 gi|294475596|gb|ADE84984.1| urea ABC transporter, permease protein UrtA [Rhodobacter capsulatus
           SB 1003]
          Length = 658

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 45/325 (13%), Positives = 100/325 (30%), Gaps = 26/325 (8%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           + L + A +             IY + A GL+I  G + ++++       +GAY+   + 
Sbjct: 355 VSLKVSAMQGADLTLDALSLASIYFLAAIGLAITFGVMRVINMAHGEFITMGAYT-GYVV 413

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT---LIMSEIFQNILIKWKP 142
            ++     + I V+  ++ A     G+   +    +LA      L+ S      L +   
Sbjct: 414 QQFISDYTISIAVALPLAFAVTFAAGVAMERLVIRHLARRPLETLLASFGISIALQQLFK 473

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
              G     +              +      +  V        + +         +L ++
Sbjct: 474 NIFGTQARPLTAP---------EWLDGALVLNDIVAISYIRIAIFVLALAFLGLFLLVMK 524

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           RT +    R +  N     S+        +  F + S   G+AG          S     
Sbjct: 525 RTRLGLEVRAVTQNPSMAASMGINPDRINMLTFGLGSGIAGIAGVAIGLFAKVTSE--LG 582

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
               +     V++GG+ ++       A++ G+ +    +N     +   +   F +    
Sbjct: 583 ADYIVQSFMTVVVGGVGNIWGTLAGAALVGGLQKGIEALNPANTLAAQTWMILFIIIFIQ 642

Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347
                       R   ++ LR  + 
Sbjct: 643 F-----------RPRGIIALRGRAA 656


>gi|188583092|ref|YP_001926537.1| inner-membrane translocator [Methylobacterium populi BJ001]
 gi|179346590|gb|ACB82002.1| inner-membrane translocator [Methylobacterium populi BJ001]
          Length = 347

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 66/315 (20%), Positives = 128/315 (40%), Gaps = 16/315 (5%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRY 88
           +  T +  + +++ I  LI  +   GL++ +G  G  SL      A+GAY+   +L    
Sbjct: 38  IPLTANDYWYNAILIPFLIMALAGLGLNLTMGYAGQASLGTGAFMAVGAYATYNLLLRLP 97

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            L + + +    +I+GA G+++GLPSL+ +G YL   TL    + + +  +    +N  +
Sbjct: 98  ELPLPVSLAGGGLIAGAVGLVVGLPSLRIKGFYLVAPTLAAQFLIEWVFNQVGWFSNDAS 157

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
              ++     +                 +      Y + L    +   +   L  +    
Sbjct: 158 SSAISAPRLVVLGH-------------DLSSPAGRYALTLTSVTVVTVLAWRLVHSQTGR 204

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSENI 267
            WR +RD + A   +   +   KLSAF V +A  G+AGA +A A    +    F    + 
Sbjct: 205 NWRAVRDGETAAAVIGVPVARTKLSAFFVGAAVSGVAGALWAFAYLGTVDARSFDLDRSF 264

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             + I+I+GG++SLS      A ++    L   ++  +    L      +     L    
Sbjct: 265 QAMFIIIIGGLSSLSGSFIGAAFIVLTPILLAHLSNAFLGGSLD-GGQISNLQRILFGAL 323

Query: 328 LFLVILMRSHSLLRL 342
           +   ++   + L+ L
Sbjct: 324 IIGFLIKEPNGLVAL 338


>gi|148270730|ref|YP_001245190.1| inner-membrane translocator [Thermotoga petrophila RKU-1]
 gi|147736274|gb|ABQ47614.1| inner-membrane translocator [Thermotoga petrophila RKU-1]
          Length = 356

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 63/361 (17%), Positives = 130/361 (36%), Gaps = 47/361 (13%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +L+     +  +  +  + L L+L       Y   +   I IY + A  L+++ G  G+ 
Sbjct: 4   KLSARTNFILTVVFLIFMALLLYLADRYMDSYKLRVVRLIAIYGIMAVSLNLINGITGIF 63

Query: 67  SLNCVIAYAIGAYSYVI-------------------LGSRYGLSIWLLIPVSAMISGACG 107
           SL       IGAY+  +                     +      +       +++    
Sbjct: 64  SLGHAGFILIGAYTASLLTLSPEQKAMSFIIEPIVPWLANVHTDFFTATVAGGVLAAVFA 123

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
            ++G P L+  GDYLAIA+L  +E+ + I +    ITNG  G+                 
Sbjct: 124 FLIGWPVLRLSGDYLAIASLGFAEVIRIIALNAIRITNGPLGLKGIP------------- 170

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                       E    +   G  F++   I  L  ++   A + IR+++ A  ++   +
Sbjct: 171 ------------EYSNIWWCYGWLFVTVLFIASLVNSSYGRALKAIREDRIAAEAMGINV 218

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIA 285
              +L +F + + F G++G+ +A     I P            V+ +++LGG+ S+S   
Sbjct: 219 FKHQLLSFVIGAFFAGVSGSLYAHWLTTIDPRTTTLGPMLTFYVLIMIVLGGLGSISGSL 278

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
              A+   + E    +   +    +            ++     LV++     ++     
Sbjct: 279 IGAALFAILFEWLRDLEEPFTFFGIHVP-GIKGMRILVISAIFILVMIFWQRGIMGREEL 337

Query: 346 S 346
           +
Sbjct: 338 T 338


>gi|326389661|ref|ZP_08211227.1| inner-membrane translocator [Thermoanaerobacter ethanolicus JW 200]
 gi|325994376|gb|EGD52802.1| inner-membrane translocator [Thermoanaerobacter ethanolicus JW 200]
          Length = 331

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 63/323 (19%), Positives = 136/323 (42%), Gaps = 30/323 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V  L+  L          +  +    LIY + A GL++++G  G +SL      A+GAY
Sbjct: 10  IVLILIATLIPPILNLPGSLQYLLDLSLIYAIVAIGLNLLMGYAGQISLGHGAFLAVGAY 69

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +   L     +  ++ + +S +I+G  G+++G+P+LK  G+YLAIATL        I   
Sbjct: 70  TSAYLTLTLHVPFFIALILSGLITGIVGILLGIPALKLEGNYLAIATLGFGVAVTQIFAI 129

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W   T G +GI       F                      +  YY++L +  +   +  
Sbjct: 130 WTSFTGGFSGIKPLKPELFGFKF---------------NSYLSYYYIILILTIVLVILTW 174

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            + RT +  +   +RD++ A  ++   + + K  AF +S+ + G+AG+ +A     ++P 
Sbjct: 175 NIIRTKVGRSLMAMRDSEIAAKAMGINVSYYKTLAFGLSAFYTGIAGSLYAHLLGFMTPY 234

Query: 260 MF--KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            +      ++  ++++++GG+ ++S       I+  + ++   +                
Sbjct: 235 DYAFSIGMSLNFLAMIVIGGIGTISGSIIGAIIMTWIPQITSNL-------------PIK 281

Query: 318 MRHTTLMVIALFLVILMRSHSLL 340
                +    +  V++   + + 
Sbjct: 282 SLSQIITGAIIIAVVIFYPNGIA 304


>gi|254562767|ref|YP_003069862.1| branched-chain amino acid ABC transporter permease/ATP-binding
           protein [Methylobacterium extorquens DM4]
 gi|254270045|emb|CAX26031.1| putative branched-chain amino acid ABC transporter,
           permease/ATP-binding protein [Methylobacterium
           extorquens DM4]
          Length = 617

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 50/330 (15%), Positives = 113/330 (34%), Gaps = 29/330 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            ++  +L V    L+ + +G +    Y  ++  + L+Y   A  + ++ G LG+L+    
Sbjct: 5   RRLSLILLVALAALVAVAVGPSLLDTYSVNVLTRSLLYAAVALTVDLLWGFLGILTFGQS 64

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           + +A GAY+  ++ +    S    +    +  G   +            + A A      
Sbjct: 65  VFFACGAYAAGLVFTHMDFSGSNALVALGLGIGGALLT-AAIVGWLAFWHGASALYASVI 123

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                ++  + + +G      +  L    +   S+  +F    SF++    + +V +   
Sbjct: 124 TLVLPIVATQLLYSGGTFTGSSSGLSGFTSFDLSVEAWFWLAGSFLVVVTTLAFVFVM-- 181

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                       +        IR+N++    L       K+  + V +A   +AG  +A 
Sbjct: 182 ------------SDAGRLLVAIRENEQRCKYLGLDTSRLKIVVYLVCAAIAALAGYLYAG 229

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               ++P++  F     ++    LGG  +L        I+                   +
Sbjct: 230 YAMVVAPELASFVFGTELVIWTALGGRGTLLGPVFGALIV--------------DYESAQ 275

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              S+      ++ +   LVI+     LL 
Sbjct: 276 LSGSYPFVWQLIIGVVFVLVIVAFPRGLLP 305


>gi|163731537|ref|ZP_02138984.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
 gi|161394991|gb|EDQ19313.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
          Length = 399

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 63/381 (16%), Positives = 135/381 (35%), Gaps = 37/381 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGAT-------KSQKYIDSMGIQILIYVMFAWGLSIVV 60
           L K D  L L+     +     L          +       +  +++I+ +FA G +I+ 
Sbjct: 4   LTKKDATLLLIVACLTMFAPFILNPFPEGSAMAQFNAGYPDLMQRLVIFGIFAIGFNILF 63

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G LS        +G+Y+ + +     +++   I +S +++G   +++G  SL+  G 
Sbjct: 64  GLTGYLSFGHAAFLGVGSYAAIWMMKLLTMNVIPAIMISVLVAGLFSLLVGWISLRRSGI 123

Query: 121 YLAIATLIMSEIFQNILIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS----- 174
           Y +I TL  +++  ++      PIT G+ G+        +   V       R        
Sbjct: 124 YFSILTLAFAQMSYSLAYSVLTPITGGETGLQPKINDPRIIDRVFGADGTERANFFGLEM 183

Query: 175 ---------SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                    S+V      YY+   +  L+  + + + R+      R ++ NQ+       
Sbjct: 184 GASYEMTVGSWVFTFNAGYYIAAFVMLLAFYLSIRIFRSPFGMMLRAVKSNQQRLNYTGL 243

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                 L+AF +S  + G+AG    A   ++  +   ++ +  V+ + ILGG  +L    
Sbjct: 244 NAKPYTLAAFVISGMYAGLAGGLLVAMDTQVGAERMFWTASGEVVLMTILGGAGTLIGPV 303

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVI 332
                +  +  +   +N         F                        + +   +V+
Sbjct: 304 LGAGFIKYMENIVSKINKTVLEQWFAFMPDGIEDFIITIVYPFVGKGWHLTLGLLFMMVV 363

Query: 333 LMRSHSLL--RLRTPSNFLER 351
           +     L+    +    F  +
Sbjct: 364 IFLPGGLVQGGQKVAGLFRRK 384


>gi|299069074|emb|CBJ40326.1| ABC transporter, permease protein (N-ter) and ATP-binding protein
           (C-ter) [Ralstonia solanacearum CMR15]
          Length = 608

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 50/309 (16%), Positives = 115/309 (37%), Gaps = 20/309 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L++   +     +   LL  L        ++  ++   I +Y + A GL ++ G  GL S
Sbjct: 17  LSRNRLLTAAFVIGLALLPVLPTP-----EFWITLLNYIGLYSLVALGLVLLTGVGGLTS 71

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                   +GAYS   L ++YGLS W+ +     I+     ++GL +++  G YL +AT+
Sbjct: 72  FGQAAFVGLGAYSTAYLSTQYGLSPWIGLLAGLAITVVSAYVIGLITMRMSGHYLPLATI 131

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                   +    + +     G+     L+                   +     M+Y++
Sbjct: 132 AWGLSLFFLFGNLEFL-GKYDGLNGIPVLH--------------LLGKPLQTGREMFYLI 176

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  ++   +  L  +    A R ++       ++     + K+  F  ++    ++G 
Sbjct: 177 WAVVVVAVLAVQNLLNSRPGRAIRALKGGGTMAEAMGVNTAWMKVVIFVAAAILACISGF 236

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A  +  ++P  F  +  I  + + ++GG+  +        +L  + +    +      
Sbjct: 237 LYAHLQRAVNPTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGLLTILKDTLQNLLPKLLG 296

Query: 308 SLLKFDCSF 316
           S   F+   
Sbjct: 297 STGNFEIIV 305


>gi|111021853|ref|YP_704825.1| ABC amino acid transporter, ATP-binding [Rhodococcus jostii RHA1]
 gi|110821383|gb|ABG96667.1| ABC amino acid transporter, ATP-binding [Rhodococcus jostii RHA1]
          Length = 607

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 61/295 (20%), Positives = 113/295 (38%), Gaps = 30/295 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                   +        I  +   GL++ +G  G L+L     YA GAY+  ++      
Sbjct: 27  PEFGLDFALSRQVQLACILALVVSGLNLGLGYAGELALGQAAMYAAGAYTAGLMSIAGYT 86

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            I L +  S +++ A G++ G+P L+     LA+ +  +  +  +I+  +   T G+ G+
Sbjct: 87  DIVLQLIASGVVALAVGIVTGIPGLRLGSWSLAMTSFFLVLLVPDIIAVFGDTTGGRNGL 146

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
              +     G  V S                  Y V++ +  L  +++  L  +    A+
Sbjct: 147 SGIEPATLFGEVVDSDR---------------FYMVVVIVAILWFAVMRNLVVSRHGIAF 191

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           RT++ +     S+  ++   KL  +A+ +   G+AGA FA     +SP+ F F+    V+
Sbjct: 192 RTLKQSPVLASSVGISVFRMKLLGYAIGAFPAGLAGALFANIDMYVSPEAFGFTFATAVL 251

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           +  ILGG TS+   A   AI+                        F         
Sbjct: 252 AACILGGATSVYGAAVGAAIMQLGPN---------------QSSEFQQYALVFYG 291


>gi|319784907|ref|YP_004144383.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170795|gb|ADV14333.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 326

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 63/316 (19%), Positives = 127/316 (40%), Gaps = 22/316 (6%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL------- 90
           Y        LI+ +   GL++  G  GL ++      AIGAY+  +L +           
Sbjct: 6   YGAFFLTTALIFSLVTLGLNLQWGLTGLFNVGLAGFVAIGAYTSALLTTPDDAARLGGLG 65

Query: 91  -SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
             I +    + ++ G    + G+ +L+ R DYLAI T  ++ + Q + +  + +T G  G
Sbjct: 66  LPIVVGWAGAMVVGGIAAALTGMATLRLRSDYLAITTFGVAVVVQLVALNAQKLTGGPFG 125

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           I    R             F     + +++ +    V+  +  ++   +  L R+     
Sbjct: 126 IGFIPRP------------FGSLAETPLLFNLSNLAVVAAVTLVAYFALEHLSRSPWGRV 173

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            + +R++++A  SL  +  F ++ AFAV  A + +AGA  A     I+PD +       V
Sbjct: 174 LKALREDERAAISLGKSARFYRVQAFAVGGAIMALAGALQAHFTGFIAPDNYLPILTFQV 233

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             ++I+GG  S       + ++  +      +    F    +            + + L 
Sbjct: 234 WVMLIVGGSGSNLGAVVGSILVWAIWAGSGTLTSILFP--PEQQARAAALQIAAIGVMLC 291

Query: 330 LVILMRSHSLLRLRTP 345
           +++L+R + L   R  
Sbjct: 292 VILLVRPNGLFGDRPR 307


>gi|299066355|emb|CBJ37539.1| putative high-affinity branched-chain amino acid transport system
           permease (livH or livM) [Ralstonia solanacearum CMR15]
          Length = 550

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 76/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ + +              +     +        
Sbjct: 276 ITYGLIGVINMAHGEFLMIGAYATYVVQTLFRNYFPAAFDWYLPAALPAAFLAAAVVGFV 335

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         +        +     S +         +
Sbjct: 336 LER--TVLRHLHGRPLETLLATFGVSLLLMQAVRSLFGAQNVEVANPSWMSGGIALYPGL 393

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     + A     L RT +    R    N+     +          AFA 
Sbjct: 394 ILPYNRLVILAFALVVVALAWAVLNRTRLGLFVRATTQNRTMAACVGVRTWKVDSYAFAF 453

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+             I     V+LGG+  L+        L  + + 
Sbjct: 454 GAGIAGLGGC--ALSQIGNVGPDLGQGYIIDSFMAVVLGGVGQLAGTIVGAFGLGLINKC 511

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   L  L+  S  
Sbjct: 512 IEPFYGAVLAK-------------IFVLVLIVLFIQKRPQGLFALKGRSAE 549


>gi|171780212|ref|ZP_02921116.1| hypothetical protein STRINF_02000 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281560|gb|EDT46995.1| hypothetical protein STRINF_02000 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 317

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 69/340 (20%), Positives = 134/340 (39%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     L VV   +L L         Y   + + I I ++   G ++V+G  G  +L 
Sbjct: 6   KLNLSWLALIVVLFGILELLAKTNILNLYYIQILMGIGISILMGLGTNLVLGFSGQFTLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+  +       +  + V  +I+    ++ G+P+L+ +GDYLAIATL
Sbjct: 66  QAGFMAIGAYATAIITQQNPTYGGFYFSMLVGVVIAVLVALVFGIPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            M+EI + +++    +TNG AG+                                   V+
Sbjct: 126 GMAEIIRIVIVNGGEVTNGAAGLTGILPYTSWP-------------------------VI 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                    +IL   R++       +R+++ A  ++   +   K+  F + +    +AG+
Sbjct: 161 FIFVAGITVLILNFLRSSTGRQVIAVREDEIAAEAMGVNVTKMKVMIFVMGAIISAIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +      + P  F   ++I  + I +LGG+ S++    A  +L  +      +      
Sbjct: 221 LYVGYIGTVVPKDFTIMKSIDYLIIAVLGGLGSITGTILAAIVLGILNMFLQNV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                    +     +  +AL LV++ R   LL  +  + 
Sbjct: 275 ---------SNLRMIIYSLALILVMIFRPGGLLGTKEFTL 305


>gi|46581146|ref|YP_011954.1| high-affinity branched chain amino acid ABC transporter permease
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|46450567|gb|AAS97214.1| high-affinity branched chain amino acid ABC transporter, permease
           protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|311234822|gb|ADP87676.1| inner-membrane translocator [Desulfovibrio vulgaris RCH1]
          Length = 358

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 67/364 (18%), Positives = 137/364 (37%), Gaps = 38/364 (10%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
            +  L ++     LL+          +Y +++ + I I ++FA  L+IV G +G  S   
Sbjct: 2   RNYTLNIVLAALCLLVVGLSQFGVLDQYSETVLMFIGINIIFAASLNIVNGYMGEFSCGH 61

Query: 71  VIAYAIGAYSYVILGSRYGLS-----------------IWLLIPVSAMISGACGMIMGLP 113
                +GAY   +L      +                   ++I +   ++   G+++ LP
Sbjct: 62  AGFMCVGAYVSSLLSVTLFTNNKLLGAALLPPELAPLLFPVVIAIGGFVAAGFGLLVALP 121

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
           S + RGDYLAI T+  + I  +++   + I  G  G +   ++      +  +       
Sbjct: 122 SFRTRGDYLAIITIAANYIVISLIENLEFI-GGPRGFHGMKKVINGMRDLADIPWM---- 176

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
                        +L     S  ++  L  +        +  ++ A   ++      KL+
Sbjct: 177 ----------LIWVLLGTLFSLWLLRRLVTSTYGKGISAVCQDEVAAEIMSVDTNHIKLT 226

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
           AF VSS   G+AG  +A     ++P  F   ++   + +V LGGM SLS    +  +   
Sbjct: 227 AFMVSSGLAGVAGGLYAHIFGYVNPQAFNILKSTEGLVMVYLGGMASLSGSVMSAILFTL 286

Query: 294 VVELCCGMNFYYFNSLLKFDCSF------NMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
           ++E    +     + L              +    ++ + L L++  R   ++  R  S+
Sbjct: 287 LIESLRFVIPGLDSVLHSVGLLPDGYELSQIWKWVIIPLILILLMQFRPEGIMGNRELSD 346

Query: 348 FLER 351
              +
Sbjct: 347 VFPK 350


>gi|119357485|ref|YP_912129.1| ABC transporter related [Chlorobium phaeobacteroides DSM 266]
 gi|119354834|gb|ABL65705.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter ATP-binding protein 1,
           HAAT family [Chlorobium phaeobacteroides DSM 266]
          Length = 629

 Score = 99.2 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 60/304 (19%), Positives = 117/304 (38%), Gaps = 17/304 (5%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +          +    K+   +   + +Y +   GL   VG LG ++L     + +GAY 
Sbjct: 20  ILLFTGLALFPSIWQGKFALGLLTLMAVYGILLIGLDATVGYLGQVNLAQAALFGLGAYG 79

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
              L  +   +  +++      +   G+ + LP+L+  G   A++TL  + +   +L + 
Sbjct: 80  A-ALAVQADAAFPVVLLAGITAALLPGVALALPTLRLEGPQFALSTLSFATLSVIVLNEA 138

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + ITNG  G+ +                       F +     Y++ L +  ++ S    
Sbjct: 139 ESITNGALGLSITRPA----------------LFGFSLDATGFYWLCLIILAITWSASQS 182

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L ++    A   +RD+  A  +L    +  K  AFA  SA  G+AGA  A +   + P  
Sbjct: 183 LLKSRFGLAIEALRDSPIATDALGIGTLRHKALAFAWGSALAGLAGALHALNFGYLQPAA 242

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F +   +I++  V+ GG  S         ++  +  L     F+   +   F  +     
Sbjct: 243 FGYDLMVILLLGVVFGGRRSQWGSFTGALVIAMLPNLLSNRTFFSSLAAAGFVIALIPVI 302

Query: 321 TTLM 324
            TL+
Sbjct: 303 RTLL 306


>gi|260222166|emb|CBA31459.1| hypothetical protein Csp_F37640 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 323

 Score = 99.2 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 67/328 (20%), Positives = 133/328 (40%), Gaps = 31/328 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L V   LL    + A    ++  ++  +I I+ + A  L++++G  GL+S        
Sbjct: 19  AALPVFLVLLALPQITAALHAEFYVTLATRIAIFALAASSLNLILGFGGLVSFGHAAFVG 78

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            GAY+  IL  +  +   +  P + ++S     ++G  SL+ +G Y  + TL  +++   
Sbjct: 79  AGAYTVGILMQQGTVPAAIAWPAAMLVSAGLACLIGFISLRTQGVYFIMITLAFAQMLYY 138

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +  K    G  G+ +A R  +               +     +  +YY+ LG   L  
Sbjct: 139 LAVSLKA-YGGDDGLPLAGRNTW---------------AGIAPDDTALYYLALGALTLCL 182

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L         + +R+N     +L   ++  +L+AF ++ A  G+AG   A     
Sbjct: 183 LFTQRLLNARFGQVLQGLRENPVRMQALGFPVLRTQLTAFTLAGAMAGLAGTLLANQGGF 242

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +SP M ++S++ +++ +VILGG+  L       A  + + E+      ++          
Sbjct: 243 VSPSMMQWSQSGMLMVMVILGGVGHLYGGVLGAAAFLLLEEVLGHTTEHWQLG------- 295

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLR 343
                   +   L  V+L+    L  LR
Sbjct: 296 --------LGAMLLAVVLLAPRGLASLR 315


>gi|86609531|ref|YP_478293.1| hydrophobic amino acid ABC transporter permease [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86558073|gb|ABD03030.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 319

 Score = 99.2 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 74/322 (22%), Positives = 132/322 (40%), Gaps = 26/322 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------Y 88
            Y     I + IY +   GL+I  G  G+ ++     +A+GAY+  I+ +         +
Sbjct: 3   SYGIFFLILVGIYGVLVLGLNIQWGYAGMFNIGVGAFFAVGAYASAIVTTPPSAEHLGGF 62

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            L  W+   ++  ++GA   ++GL +LK R DYLAIAT+ ++EI   IL     +TNG  
Sbjct: 63  NLPFWVGFAIAVAVAGAIAFLIGLITLKLRSDYLAIATIGIAEIISQILRNEGWLTNGVR 122

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           GI    R +      +  + +                ++L +  +         R+    
Sbjct: 123 GITRIPRPFRGWIPGQDTLLYLG--------------LVLVILAVVYWAAERAYRSPWGR 168

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE-NI 267
             R IR+++ A  +    ++  +L AF + S  +G+AGA +A   + ISP+ F+      
Sbjct: 169 VLRAIREDEPATLAAGKDVLQFRLQAFVLGSMLMGLAGALYAHFVNFISPEAFQPEFATF 228

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           IV  ++I GG  +         ++ GV      +                +    +++  
Sbjct: 229 IVWVMLIAGGSGNNRGALLGALVIWGVWSGSEWLTNRLPPQWATRAGPLRILLIGILLQV 288

Query: 328 LFLVILMRSHSLLRLRTPSNFL 349
           + L    RS  LL  R P   L
Sbjct: 289 ILLT---RSQGLLPERPPKPVL 307


>gi|320547326|ref|ZP_08041617.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus equinus
           ATCC 9812]
 gi|320448024|gb|EFW88776.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus equinus
           ATCC 9812]
          Length = 317

 Score = 99.2 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 70/340 (20%), Positives = 135/340 (39%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     L VV   +L L         Y   + + I I ++   G ++V+G  G  +L 
Sbjct: 6   KLNLSWLALIVVLFGILELLAKTNILNLYYLQILMGIGISILMGLGTNLVLGFSGQFTLG 65

Query: 70  CVIAYAIGAYSYVILGSR--YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAYS  I+  +       +  + V  +I+    ++ G+P+L+ +GDYLAIATL
Sbjct: 66  QAGFMAIGAYSTAIITQQNPTYCGFYFSMLVGVVIAILVALVFGIPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            M+EI + +++    +TNG AG+                                   V+
Sbjct: 126 GMAEIIRIMIVNGGELTNGAAGLTGILPYTSWH-------------------------VI 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                +   +IL   R++       +R+++ A  ++   +   K+  F + +    +AG+
Sbjct: 161 FIFVAVITVLILNFLRSSTGRQVIAVREDEIAAEAMGVNVTKMKVMIFVMGAIISAIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +      + P  F   ++I  + I +LGG+ S++    A  +L  +      +      
Sbjct: 221 LYVGYIGTVVPKDFTIMKSIDYLIIAVLGGLGSITGTILAAIVLGILNMFLQNV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                    +     +  +AL LV++ R   LL  +  + 
Sbjct: 275 ---------SNLRMIIYSLALILVMIFRPGGLLGTKEFTL 305


>gi|295111031|emb|CBL27781.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           (TC 3.A.1.4.-) [Synergistetes bacterium SGP1]
          Length = 299

 Score = 99.2 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 71/309 (22%), Positives = 124/309 (40%), Gaps = 40/309 (12%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y   +   + I ++ A G+S+  G  G+ +L      AIGAY+  IL   Y +     I 
Sbjct: 5   YASGVVTLLAINLIAALGVSLFTGFTGIFTLGHAGYMAIGAYTAAILTVEYEVHFAAAIL 64

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
              ++S     ++GLP+LK  GDY AI +L + E  + I+  W  +T G  G    D   
Sbjct: 65  AGGVLSMVLAYLIGLPTLKLVGDYYAIVSLGLGEAIRLIIENWNSVTRGARGYPGIDNYT 124

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +                          V +    +   ++ +L  +    A++  RD+ 
Sbjct: 125 SMT-------------------------VAVSFFLVLCVLMFFLINSRYGRAFKACRDDY 159

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A   L       ++ + A+S+ + G+AGA  A     I P MF   ++  ++SIV+ GG
Sbjct: 160 VAASLLGFNTAHFRVLSLAISAFYCGVAGALLAGYMSFIQPVMFDQVKSTELVSIVVFGG 219

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S S     T IL  V EL   ++ Y                  +    L L++++R  
Sbjct: 220 LGSTSGCLIGTTILTLVTELFRPISQY---------------RMLVYGAVLVLIMVLRPE 264

Query: 338 SLLRLRTPS 346
            ++     +
Sbjct: 265 GIMGTNELT 273


>gi|160914595|ref|ZP_02076809.1| hypothetical protein EUBDOL_00602 [Eubacterium dolichum DSM 3991]
 gi|158433135|gb|EDP11424.1| hypothetical protein EUBDOL_00602 [Eubacterium dolichum DSM 3991]
          Length = 319

 Score = 99.2 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 70/341 (20%), Positives = 139/341 (40%), Gaps = 43/341 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            +K +    L  +   +++ + +       Y  +    I I ++ A  L++++G  G  S
Sbjct: 5   FSKTNLCWLLTIIGIFVIMSIAMQTGIINAYYQTTIYTIGINIILAVSLNLIIGVTGQFS 64

Query: 68  LNCVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           L       IGAY+  I+   +   + + L   + A IS    +I+ +P+L+ +GDYLAIA
Sbjct: 65  LGHAGFMCIGAYAAAIVTKSNPTLMGLALGAIIGAAISAVVALIVAIPTLRLKGDYLAIA 124

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL  SEI + +++                                     F I ++  + 
Sbjct: 125 TLGFSEIVRIVVLNMTITNGAA--------------------------GLFGIPKLTSWP 158

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           VL G   LS  +IL    +A   A  +IR+++ A  ++       K  AF + +    +A
Sbjct: 159 VLFGCIVLSMIVILNFGLSAPGRACISIREDEIASEAMGINTTKYKTIAFVIGAMIAALA 218

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA +A +   + PD+F +++++ ++ +V+ GGM S +    A  ++  +           
Sbjct: 219 GALYACNFYVVKPDLFTWTKSVDILILVVFGGMGSFTGSVLAAIVIGFINMFLQ------ 272

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                     F      +   AL L+++ R   +   +  +
Sbjct: 273 ---------QFADIRMIIYGAALVLIMVFRPKGIFGTKEFT 304


>gi|160895480|ref|YP_001561062.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160361064|gb|ABX32677.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 345

 Score = 99.2 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 75/331 (22%), Positives = 136/331 (41%), Gaps = 17/331 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +      L L    +  Y   +   + I V  A GL+I+ G  GL+SL       +GA
Sbjct: 24  IWLAMAGALLLLFPFMASDYWLYLACLVSINVAGATGLNILTGYTGLVSLGQAAFMGLGA 83

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  I+ +R+G  +   +     ++   G+++GLPSL+ +G YLAIAT+  S I   +  
Sbjct: 84  YTVAIVQARWGTPVLFNLLAGGFVAMLGGIVVGLPSLRVKGLYLAIATIAASFIAHFLFA 143

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +T G AG+ +     F      S                 +Y+V++ +  L     
Sbjct: 144 NL-RLTGGTAGLTLQPATVFGVALDTSFR---------------LYWVIVPVTLLMLLGA 187

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L RT I  A+  IRD   +   L   ++  KL +F +SS + G+AG  +A     ++P
Sbjct: 188 ANLFRTRIGRAFIAIRDRDISAEVLGIPLLRYKLLSFGLSSFYAGVAGGLWAYFFRVVTP 247

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F    +I  ++ +I+GGM S+         +  V EL   +         +     + 
Sbjct: 248 ESFPLLMSIFFLAAIIVGGMGSILGGILGAVFMTMVPELLKLIVD-LLPGGSELAVFLSP 306

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
             T +  + + + ++     L ++       
Sbjct: 307 VRTMVFGLLIIVFLVFEPQGLAQMWRRLRRF 337


>gi|55377665|ref|YP_135515.1| high-affinity branched-chain amino acid transport protein
           [Haloarcula marismortui ATCC 43049]
 gi|55230390|gb|AAV45809.1| high-affinity branched-chain amino acid transport protein
           [Haloarcula marismortui ATCC 43049]
          Length = 460

 Score = 99.2 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 68/383 (17%), Positives = 132/383 (34%), Gaps = 50/383 (13%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +   +  + +V  + +     A  +  +I S+ + I  Y + A  L++  G  GL ++  
Sbjct: 56  FIASIWAVMLVLAIAVGGANWANLAAGFIGSVTVLIGGYAILALALNLQWGYTGLFNIGI 115

Query: 71  VIAYAIGAYSYVILGSRYGL----------SIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
               A+GAY+  +L +               +W+ +     ++   G +  LP+L+ + D
Sbjct: 116 AGFMAVGAYTTAVLTAPTDPAAGAVPGLGLPLWVGLIGGMAMAAIIGGLAALPALRLKAD 175

Query: 121 YLAIATLIMSEIFQNI----------LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
           YLAI T+  SEI + +          L      T G  GI          T +  + +  
Sbjct: 176 YLAIVTVAFSEIIRLVVNWNGLAEVSLFGVPFGTGGATGISFKSANEVASTLINGVGQPL 235

Query: 171 RFPSSFVIYEIFMY------YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
              +  V              +LL +   S  ++  +  +      + IR+++    SL 
Sbjct: 236 VTAAEGVGVSGPNLANLTYGILLLLVVAASYWVLARITNSPFGRVLKAIREDETVTQSLG 295

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                 K+  F +  A +G+AG  F      +SP  F+ +    V + +I+GG  S +  
Sbjct: 296 KDTRRFKIKTFMIGCALMGLAGVLFRGQAGYVSPQQFRPTITFYVFAALIIGGSGSNTGS 355

Query: 285 AKATAILIGVVELCCGMNFY------------------------YFNSLLKFDCSFNMRH 320
               A   G++                                     L     + +   
Sbjct: 356 IIGAATFSGLLFYLPARLGENVSLGGTRAPSNIVDAIAGLGSLDPLPLLAYTISNVSTLR 415

Query: 321 TTLMVIALFLVILMRSHSLLRLR 343
             L+ + L  +I  +   LL  R
Sbjct: 416 FVLIGVVLIYIIQNQPDGLLGHR 438


>gi|221215295|ref|ZP_03588260.1| ABC branched chain amino acid family transporter, fused ATPase and
           permease [Burkholderia multivorans CGD1]
 gi|221164727|gb|EED97208.1| ABC branched chain amino acid family transporter, fused ATPase and
           permease [Burkholderia multivorans CGD1]
          Length = 597

 Score = 99.2 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 50/326 (15%), Positives = 109/326 (33%), Gaps = 29/326 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            L      L+ + +       Y+ ++ I+ L        + I+ G +G+L+      + +
Sbjct: 15  ALIGCLLSLVVVAVAPFMLDTYLTNILIRTLFLAAVVMTVDILWGYVGILTFGQSAFFGL 74

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  ++ + +G      +   A+  GA  ++    +      + A             
Sbjct: 75  GAYACGLIFTHFGFGPGWALAALALAMGAAALLAAG-TGWLAFFHGASPLYASIITLALP 133

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           ++  + I +G      +  L    T    L  +F     F++      ++L+        
Sbjct: 134 IVLTQVIYSGGNFTGSSSGLSGFPTYYWELEVWFWIAGGFLVLTTTGGWLLV-------- 185

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
                 R+        IR+N++    L   +   K     +S+    +AG  +A   + +
Sbjct: 186 ------RSDFGRVLVAIRENEERCAYLGIPVSRIKTMLMILSAMVASVAGFGYAVFSNVV 239

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +P++  F     ++    LGG  +L     A   +  +     G   + +          
Sbjct: 240 APELAGFQLGTELLIWTALGGRATLLGPVFAAISIDTMSSWLSGALPFLWK--------- 290

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
                 L  IA  LVI++       L
Sbjct: 291 -----LLTGIAFVLVIVLLPRGFAPL 311


>gi|313885447|ref|ZP_07819197.1| branched-chain amino acid ABC transporter, permease protein
           [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619177|gb|EFR30616.1| branched-chain amino acid ABC transporter, permease protein
           [Eremococcus coleocola ACS-139-V-Col8]
          Length = 322

 Score = 99.2 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 84/344 (24%), Positives = 147/344 (42%), Gaps = 43/344 (12%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R+N+ + I  LL V    +LF    A     Y     + I++ +++A GL++V+G  G  
Sbjct: 3   RMNRKNGIWFLLIVAAFAILFALTQANIINAYYRITLMTIMLNIIYAVGLNLVLGIAGQF 62

Query: 67  SLNCVIAYAIGAYSYVILGS---RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           SL      AIGAY+  I         L +   I +  +IS    +++G+P+L+ +GDYLA
Sbjct: 63  SLGHAGFIAIGAYAAAICTKAAANPWLGLLEGILLGVVISVIVALLVGIPTLRLKGDYLA 122

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           IATL ++EI + ++  W+ ITNG AGI                              +  
Sbjct: 123 IATLGVAEIIRVLINNWRSITNGPAGISGIP-------------------------TVTN 157

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           + V+     L+  ++L    +++  A R I  N+ A  ++   +   K+ AFA+ +A   
Sbjct: 158 WMVVFVALVLTTILVLNYNYSSVGRATRAIEQNEIAAEAMGVNVTKYKVMAFAMGAATAA 217

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           + G+  A     ++P  + F+ +I ++ IV+ GGM S +    A                
Sbjct: 218 IGGSLQATFLGIVTPKDYTFNRSIDILIIVVFGGMGSFTGSFIAAI-------------- 263

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                L  F   +      +  +AL L+++ R   LL       
Sbjct: 264 -LLGLLNLFLQDYGQLRMIIYAVALILIMIFRPQGLLGTSEFKV 306


>gi|292654059|ref|YP_003533957.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haloferax volcanii DS2]
 gi|291369834|gb|ADE02062.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haloferax volcanii DS2]
          Length = 648

 Score = 99.2 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 70/326 (21%), Positives = 127/326 (38%), Gaps = 15/326 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A V  LL+   L       Y  ++   ILI+ +FA  L +V+G  GL+SL   + Y +GA
Sbjct: 303 AGVGALLVVPLLAEVTGVTYSVTLLEDILIWALFALSLDLVLGYAGLVSLGHTLFYGVGA 362

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+ V+       S+++ + V+  +  A    +G  S++  G + A+ TL  +E+F N + 
Sbjct: 363 YASVLTLMHLSPSVFVALAVAVAVCAAIAWGVGYLSIRVSGVFFAMITLGFAELFYNAVF 422

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           K+           V       G  V                 +  YY LL +   S  + 
Sbjct: 423 KFDFTGGPDGLFGVDAFYGLAGLGVDPGEFAVPLGPFVHDGGVVQYYFLLAVVVGSYLLA 482

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R    +  ++IR++++    +   +   K  AF VS    G+AG  FAA    ++P
Sbjct: 483 RRLIRAPFGSVLQSIRESEERASFIGYDVTAYKRRAFVVSGGLAGVAGGLFAADNGYVAP 542

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
               +  +  VI + +LGGM +L        + +   ++       +             
Sbjct: 543 SFLHWINSGEVIVMTVLGGMGTLYGPMLGAGVFVAAEDVLSSYIDQW------------- 589

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRT 344
               +  +   L ++     L+ L  
Sbjct: 590 --QLVTGVLFVLFVIFVPRGLVSLSR 613



 Score = 93.4 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 51/297 (17%), Positives = 105/297 (35%), Gaps = 27/297 (9%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLSIWLLIPVSAMISGA 105
           ++YV+ A GLSI+ G + +++      +A+GAY ++ I G   G   W+ + V+ ++ G 
Sbjct: 1   MVYVLLAAGLSIIFGVMDVINFAHGEQFALGAYFAFAIAGPLGGAGFWVALVVAPLLVGV 60

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
            GM +   ++K       +  ++++     I+        GK+                 
Sbjct: 61  VGMGIERLTVKRLYGRDPLYHILLTFGLVLIVNDLITSAWGKSAQPFPIPPILDQP---- 116

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                        Y ++ Y +++    L+    L L RT      R   ++++   +L  
Sbjct: 117 ------VALFGFNYSLYNYGIIVFGSALALGTWLLLNRTRFGMIIRAGSEDREMVRTLGI 170

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
            I       F   +A  G+AG    A ++         S  I    IV+LGG+ S     
Sbjct: 171 DIDRYYTLTFGFGAALAGVAGIVLGAYQNV--SPTMGSSVIIPAFVIVVLGGLGSFRGAV 228

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                +  V         +                  ++ + +  V++++   L   
Sbjct: 229 VGGLFVGLVQTFARTYAPFLEG--------------LIVFLLMISVLVVKPTGLFGT 271


>gi|118431403|ref|NP_147858.2| ABC transporter, permease protein [Aeropyrum pernix K1]
 gi|116062727|dbj|BAA80295.2| ABC transporter, permease protein [Aeropyrum pernix K1]
          Length = 345

 Score = 99.2 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 54/315 (17%), Positives = 120/315 (38%), Gaps = 19/315 (6%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                KY  ++ + ++I+ + A GL+I +G  G +SL       IGAY+        G++
Sbjct: 37  PFVIGKYYLNLLVVMMIFWIAAIGLNITLGLAGQISLAHAALMGIGAYTVANAALHLGVN 96

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
              ++P++ + +   G+I+ LPS + +  YLA+A+L    I + +  +            
Sbjct: 97  SVAILPIAGLAAALLGIILSLPSFRLKEYYLAMASLAAQLILEYVYSRID---------- 146

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                    +     +YY +L +  + A     + R+++  A +
Sbjct: 147 -------PDQYTPVPPETKTLLGISLTEPTALYYFILAITVVMALAAANIGRSSLGRAMK 199

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +RDN  A  ++   +   K +AFA+   + G+AG  +A     I  + F    +I ++ 
Sbjct: 200 AVRDNDVASEAIGINVQLVKATAFAIGGFYAGVAGGLYAIYSSGIGWEGFTLVNSIELLG 259

Query: 272 IVILGGMTS-LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +V++GG    +        ++     +            +      +     ++   +  
Sbjct: 260 MVLIGGPGRVVWGSLLGVLVMRTGWTMMESTITPLLAG-IGLSIIASSAKYIVLGFLIVA 318

Query: 331 VILMRSHSLLRLRTP 345
            I+     L+ +   
Sbjct: 319 FIIAEPEGLIAVLRR 333


>gi|296453276|ref|YP_003660419.1| inner-membrane translocator [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296182707|gb|ADG99588.1| inner-membrane translocator [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 327

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 63/313 (20%), Positives = 122/313 (38%), Gaps = 8/313 (2%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           +      YV+ A GL+I  G  GL+++       +GAY + I     G +++  +  +  
Sbjct: 15  IAPTTAAYVLAAIGLNIHFGMTGLMNMGQAGFMLLGAYGFAI-TQSMGCNLFASVCAALA 73

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIYVADRLYFL 159
           ++    +++G+P+LK   DYLA+ TL  +EI + +         T G AGI   D     
Sbjct: 74  LAVIYALLLGIPTLKLGPDYLAMVTLAAAEIIRIVGRSTAMTNFTGGSAGISPQDFTEKF 133

Query: 160 ----GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                    S        S+ +    ++  V   +  ++A +      +      + IR+
Sbjct: 134 EALSPLPDGSTTFLLWTYSNNIANSWWLRIVAWILVAIAAFLCWRWFHSPWGRMLKGIRE 193

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  SL   +   K+ +  +   F  MAG  F      + PD    +    V +I++L
Sbjct: 194 DENAIRSLGKPVTKYKMESLILGGLFGAMAGIIFVLP-RSVQPDSLGRTVTFYVWTILLL 252

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  ++      + +L  ++     +        L            ++ +AL  +++ R
Sbjct: 253 GGAATILGPVLGSCVLWVLLTFVKEVMRNTVPETLISSNQIEALGWVIVGVALMCLVIFR 312

Query: 336 SHSLLRLRTPSNF 348
              LL  R    F
Sbjct: 313 PQGLLGDRKELAF 325


>gi|167005616|ref|ZP_02271374.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 351

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 75/355 (21%), Positives = 135/355 (38%), Gaps = 47/355 (13%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L  +   ++F+F+       Y  ++  QI I+++ A   +++ G  G  SL      AIG
Sbjct: 11  LIFLIASIVFIFVSPYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIG 70

Query: 78  AYSYVI--------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           AY+  +                    + + +  S  L + V+ + S    +I+     + 
Sbjct: 71  AYAAALVLLSADAKNDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRV 130

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL    I +   I +  ITNG  G+    +                      
Sbjct: 131 RGDYLAIVTLGFGIIIKIAAINFPSITNGSRGLVDIPQFS-------------------- 170

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                  Y   G+  ++  +IL +  +    A + IRD++ A  ++     + K  AF+ 
Sbjct: 171 -----TIYWTGGIAIVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFST 225

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           S+   G+ G   A     +SP  F F     ++ I++LGG+ S +       ++IG  E 
Sbjct: 226 SAFLEGVGGGLLACLLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEW 285

Query: 298 CCGMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              ++       SL     S       +  I L LV+L     ++     S+ + 
Sbjct: 286 LRFLDELNIKIDSLNLDIQSMPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 340


>gi|113867430|ref|YP_725919.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
 gi|113526206|emb|CAJ92551.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
          Length = 365

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 61/309 (19%), Positives = 124/309 (40%), Gaps = 26/309 (8%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-SRYGLSIW 93
           S K+   +  +++I  +FA  L +++G  GL+SL     +A+ AY+  IL       + W
Sbjct: 42  SNKFYIELLSKVMIMAIFALSLQLLIGYTGLVSLGHAAYFAMAAYATAILAPQAGPGNGW 101

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           LL+  +   S    +++G   L+ RG Y  + TL  +++   +      I  G  G Y+ 
Sbjct: 102 LLLAGALTASALLALVVGALVLRTRGVYFIMVTLAFAQMVYFVFHD-TNIAGGSDGTYIY 160

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            R  F                  V      Y+++     L+ +++  + R+   +A   I
Sbjct: 161 FRPEFPVP---------GEHLLTVNDPTHFYWLVWLGLVLTVAVLALVLRSRFGHALVGI 211

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R N++   +        +L AF       G+AG  +A     ++P++  + ++   + +V
Sbjct: 212 RHNEQRMRAAGYATYRYQLGAFVAGGMLAGLAGFLYAIQFGFVNPEIASWHQSGNAMLMV 271

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ILGG+ SL+         + + E    +  ++                 LM   + + + 
Sbjct: 272 ILGGVGSLAGAVLGAFSFVLLAEWFSTLTKHW---------------QLLMGGFIIVAVA 316

Query: 334 MRSHSLLRL 342
           +    L+ L
Sbjct: 317 LLPRGLVSL 325


>gi|256392503|ref|YP_003114067.1| inner-membrane translocator [Catenulispora acidiphila DSM 44928]
 gi|256358729|gb|ACU72226.1| inner-membrane translocator [Catenulispora acidiphila DSM 44928]
          Length = 329

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 54/323 (16%), Positives = 119/323 (36%), Gaps = 26/323 (8%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
              L  FL +  +    Y  S+  + L   + A  +SI+ G  GL +      + +GAY+
Sbjct: 22  AAVLAAFLLIAPSSFDGYGVSLLSKALALGVLAVSVSILAGYAGLPTSGQAAPFMVGAYA 81

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             ++G+       + +    +++       GL +++ RG    + TL + E+      +W
Sbjct: 82  AGVMGTHGHTIGVVQLLCGTLVAAGFAAATGLVAVRTRGVAFLMTTLALGELTVTAAGEW 141

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T G  G+Y    +  L                 +  +  +Y+ +L       +++ W
Sbjct: 142 RSLTGGTDGMYGIPPVKPLPGMAT------------LDSDRSVYWFVLVSTAAIVAVVWW 189

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           + R+ +       RD++    S    +   +  A+  + A  G  G    +    +SPD 
Sbjct: 190 VLRSPVGKLLLACRDHEARMRSAGHPVTRYQWLAYVGAGALAGFGGVLMCSVNQYVSPDD 249

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
             F+ + +V+  V++GG TS         +++   +   G               F    
Sbjct: 250 GSFANSALVLLAVVIGGATSPLGALLGAGLIVATRDWLAG--------------PFPGHG 295

Query: 321 TTLMVIALFLVILMRSHSLLRLR 343
             L+ +   + +      +  +R
Sbjct: 296 PLLLGMMFIIAVYALPDGVAGIR 318


>gi|319792343|ref|YP_004153983.1| ABC transporter [Variovorax paradoxus EPS]
 gi|315594806|gb|ADU35872.1| ABC transporter related protein [Variovorax paradoxus EPS]
          Length = 595

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 53/323 (16%), Positives = 115/323 (35%), Gaps = 22/323 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +  +  +++ L L    +  +  S+   I I  + A GL ++ G  G  S        I 
Sbjct: 8   MLWIAAVIVVLTLVPAVAGSFTVSLLNDIGIGALVALGLVLLTGVGGATSFGQAAFVGIA 67

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+   L +  G+S W+ +  + +++G   + +G+ +L+  G +L ++T+        + 
Sbjct: 68  AYATAWLTTTQGMSPWIGLLFALLLTGISALAIGMLTLRLGGHFLPLSTIAWGLSIAMLF 127

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                +     G+     L   G                +     MYY++  +  L+   
Sbjct: 128 GNVDAL-GRHTGLSNIPALQVGGW--------------SLADPRSMYYLIWVVVGLACLF 172

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L ++    A R +R       S+       +L+ F  ++ F G+AG  +A     +S
Sbjct: 173 SHNLLQSRPGRAIRGLRGGATLLASVGADAYRVRLTLFVTAALFAGLAGWLYAHMNRFVS 232

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F    +I  + + + GG+  L+      A+++ +      +                
Sbjct: 233 PSPFDVRASIEYLLMAVAGGLGQLAGALVGAALVLVLKNGLQDVLPMLTQRA-------G 285

Query: 318 MRHTTLMVIALFLVILMRSHSLL 340
                       L++      L+
Sbjct: 286 QLEAVAFAALFILLLHFARGGLM 308


>gi|120601614|ref|YP_966014.1| inner-membrane translocator [Desulfovibrio vulgaris DP4]
 gi|120561843|gb|ABM27587.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Desulfovibrio vulgaris DP4]
          Length = 358

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 66/364 (18%), Positives = 137/364 (37%), Gaps = 38/364 (10%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
            +  L ++     LL+          +Y +++ + I I ++FA  L+IV G +G  S   
Sbjct: 2   RNYTLNIVLAALCLLVVGLSQFGVLDQYSETVLMFIGINIIFAASLNIVNGYMGEFSCGH 61

Query: 71  VIAYAIGAYSYVILGSRYGLS-----------------IWLLIPVSAMISGACGMIMGLP 113
                +GAY   +L      +                   ++I +   ++   G+++ LP
Sbjct: 62  AGFMCVGAYVSSLLSVTLFTNNKVLGAALLPPELAPILFPVVIGIGGFVAAGFGLLVALP 121

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
           S + RGDYLAI T+  + I  +++   + I  G  G +   ++      +  +       
Sbjct: 122 SFRTRGDYLAIITIAANYIVISLIENLEFI-GGPRGFHGMKKVINGMRDLADIPWM---- 176

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
                        ++     S  ++  L  +        +  ++ A   ++      KL+
Sbjct: 177 ----------LIWVILGTLFSLWLLRRLVTSTYGKGISAVCQDEVAAEIMSVDTNHIKLT 226

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
           AF VSS   G+AG  +A     ++P  F   ++   + +V LGGM SLS    +  +   
Sbjct: 227 AFMVSSGLAGVAGGLYAHIFGYVNPQAFNILKSTEGLVMVYLGGMASLSGSVMSAILFTL 286

Query: 294 VVELCCGMNFYYFNSLLKFDCSF------NMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
           ++E    +     + L              +    ++ + L L++  R   ++  R  S+
Sbjct: 287 LIESLRFVIPGLDSVLHSVGLLPDGYELSQIWKWVIIPLILILLMQFRPEGIMGNRELSD 346

Query: 348 FLER 351
              +
Sbjct: 347 VFPK 350


>gi|70729989|ref|YP_259728.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68344288|gb|AAY91894.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas fluorescens Pf-5]
          Length = 349

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 68/318 (21%), Positives = 128/318 (40%), Gaps = 16/318 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILG 85
           F  +    +  +++++ I  L+  +   GL+++ G  G  S+      A+GA+ +Y IL 
Sbjct: 31  FGVVPVLGNDYWLNAILIPFLVLSLAGLGLNLLTGYTGQTSVGAAGFMAVGAFATYGILL 90

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
               L + L +    +IS   G + GLPS + +G YL ++TL      + + +K+    N
Sbjct: 91  RLPQLGLPLALLGGGLISALVGWLFGLPSSRIKGFYLMVSTLAAQFFLEWLFVKFPWFYN 150

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
             +   ++     L     +  +               Y + L    L   +   L R+ 
Sbjct: 151 YGSSGTISAPQLSLLGHDLNHPQG-------------RYLLTLVTVLLLTWVAQNLVRSQ 197

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFS 264
           +   W  IRD   A   +   +   K  AFAVSS ++G+AGA +A A     S   F  +
Sbjct: 198 VGRNWMAIRDMDTAAAVIGIPVARYKRQAFAVSSFYLGIAGALWAFAYLGTASASSFDIN 257

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
            +  ++ I+I+GGM S++      A +  +  L            +            + 
Sbjct: 258 RSFQILFIIIIGGMGSVAGNFVGAAFISLLPILLSHAGQALLGGAVDAG-QLQNLQKIIF 316

Query: 325 VIALFLVILMRSHSLLRL 342
            + + L ++     L+RL
Sbjct: 317 GVLIILFLIKEPEGLIRL 334


>gi|17546759|ref|NP_520161.1| ABC transporter permease [Ralstonia solanacearum GMI1000]
 gi|17429058|emb|CAD15742.1| probable permease transporter transmembrane protein [Ralstonia
           solanacearum GMI1000]
          Length = 538

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 75/291 (25%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ + +              +     +        
Sbjct: 264 ITYGLIGVINMAHGEFLMIGAYATYVVQTLFRNHFPAAFDWYLPAALPAAFLAAAVVGFV 323

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         +        +     S +         +
Sbjct: 324 LER--MVLRHLYGRPLETLLATFGVSLLLMQAVRSVFGAQNVEVANPSWMSGGIALYPGL 381

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L RT +    R    N+     +          AFA 
Sbjct: 382 ILPYNRLVILAFALVVVTLAWAVLNRTRLGLFVRATTQNRAMAACVGVRTWKVDSYAFAF 441

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+             I     V+LGG+  L+        L  + + 
Sbjct: 442 GAGIAGLGGC--ALSQIGNVGPDLGQGYIIDSFMAVVLGGVGQLAGTIVGAFGLGLINKC 499

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   L  L+  S  
Sbjct: 500 IEPFYGAVLAK-------------IFVLVLIVLFIQKRPQGLFALKGRSAE 537


>gi|148255134|ref|YP_001239719.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. BTAi1]
 gi|146407307|gb|ABQ35813.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 333

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 112/302 (37%), Gaps = 25/302 (8%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++ + +LIY +   G +++ G  GLLS      +  GAY   I   R+GL  +  +P++ 
Sbjct: 45  ALAVNVLIYGVVVMGYNLLFGYTGLLSFGHAAFFGTGAYLTGIAIGRFGLPWFAAVPLAI 104

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
             S A    +G  S + RG Y ++ TL ++++   + ++    T G+ G+          
Sbjct: 105 AASTALAAAIGTISTRTRGIYFSMVTLALAQLVYYVALQASSWTGGENGLR--------- 155

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                            +  +  YYVL+    L+      +  +        IR+N++  
Sbjct: 156 -GFTVDHVNLLGLQINFLDPVNKYYVLMAFAALAIWAQSRILNSPFGAVIEAIRENEQRA 214

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +    +   KL  F +S A   + G   A     +  D+  +  + +++ +V+LGG  S
Sbjct: 215 RACGYDVERCKLIVFMLSGAISAIGGCMSALHLSIVPLDILHYQTSGMIVMMVLLGGARS 274

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                   A+ + + ++      ++                 ++       +L     + 
Sbjct: 275 FFGPFIGAAVFLILEDVVSIWTPHW---------------QIVVGAIFVGFVLFLPKGIW 319

Query: 341 RL 342
             
Sbjct: 320 GT 321


>gi|320450029|ref|YP_004202125.1| branched-chain amino acid transport system permease LivM [Thermus
           scotoductus SA-01]
 gi|320150198|gb|ADW21576.1| branched-chain amino acid transport system permease protein LivM
           [Thermus scotoductus SA-01]
          Length = 355

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 65/307 (21%), Positives = 124/307 (40%), Gaps = 21/307 (6%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y   +   + I  + A GL ++VG  G +SL       +GAY+       YG   +L 
Sbjct: 55  SPYPMYVATLVAIGALSALGLHLLVGGAGQISLGHAAFMGVGAYTA---SHLYGPLAFLG 111

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           I +   I+   G+++GLPSL+ +G YLAIATL    +   +   W+ +T G  G  +   
Sbjct: 112 ILLGGGIAALLGLVLGLPSLRIKGVYLAIATLAFQFLADYVFKNWEGVTGGIRGRTLPPA 171

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
             F                        ++Y++L            L  T    A+  +RD
Sbjct: 172 ELFGLALDTPEK---------------LWYLVLFFTLPLFFYGKRLLMTRAGRAFMAVRD 216

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N  +       ++  KL AFA+S+ + G+AG   A     ++P+ F  + +I  +++VI+
Sbjct: 217 NDLSARVAGVDLVRVKLMAFALSAFYAGVAGGLLAQLYKAVTPEYFPLTVSIQYLAMVIV 276

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  ++         ++ + E+   +         ++  +          + +   +++ 
Sbjct: 277 GGAGTVLGAVLGAFFVLLIPEVLNSLVGALGP---QYAATLAAWRNVAFGLLILGFLILE 333

Query: 336 SHSLLRL 342
              L+ L
Sbjct: 334 PLGLVGL 340


>gi|147678684|ref|YP_001212899.1| branched-chain amino acid ABC-type transport system, permease
           components [Pelotomaculum thermopropionicum SI]
 gi|146274781|dbj|BAF60530.1| branched-chain amino acid ABC-type transport system, permease
           components [Pelotomaculum thermopropionicum SI]
          Length = 324

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 63/310 (20%), Positives = 119/310 (38%), Gaps = 20/310 (6%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y   +   + +  + A    + + S G LSL C    +IGAY+  IL   YG+ ++
Sbjct: 3   LLNVYHLQIITFMAVNSILALSFYLPL-SAGQLSLGCAGFMSIGAYTAAILSLHYGMPVF 61

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             IP  A  +   G+++G P+L+  G YLAIATL   E+ + + +    ITNG  G+   
Sbjct: 62  TTIPAGAAAAALAGVLLGFPALRLTGVYLAIATLGFGEVVRVLFLNL-KITNGALGMPEI 120

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY---YVLLGMCFLSASIILWLRRTAISNAW 210
             L    + +          +   +  +           +     + +L    +    A 
Sbjct: 121 PNLNDYFSALYRSWGLQGGLAGLDLPRLAALTTVVFCYFVLAACVAFVLRQENSRTGRAM 180

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             ++ ++ A   +     + K+ AF   +   G+AGA  A   + I+P  F +   + ++
Sbjct: 181 AAVKADEVASGVMGIGATYIKMLAFVQGAFLAGLAGAISAHVTNFIAPGDFNYHRAVNIL 240

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
             V+LGG   +       A+L  + E    M  +                  +    L  
Sbjct: 241 LFVVLGGSELVWGGLLGAAVLSVLPEFLRFMQDF---------------RWIIFGALLAA 285

Query: 331 VILMRSHSLL 340
           +++ R   L+
Sbjct: 286 MMVFRPQGLI 295


>gi|144899102|emb|CAM75966.1| inner-membrane translocator [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 319

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 64/309 (20%), Positives = 118/309 (38%), Gaps = 30/309 (9%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             +  Y   + +  L   +   GL++++G  G +SL     +A+GAY   I  SR+G+  
Sbjct: 27  GFANAYYYDVAVGALFNAIICVGLNLLIGYGGQISLGHGAFFALGAYGSAIATSRWGVPP 86

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
              +  SA + G    ++  P L+ +G YLA+ATL +  I   +L      T G  G+ V
Sbjct: 87  LAAMVASATLVGLMAFVIARPILRLKGHYLAMATLGIGMIIYIVLKTEAQWTGGPDGMGV 146

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                                          Y++   +  L+  + L L ++ +  A R 
Sbjct: 147 DPLAVAGLALTTDRQW---------------YWLSAALLLLAVWLSLNLVQSPVGRALRA 191

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
               +     +       K+  F VS+ F  + G+ FA     I+PD+  F  +I ++++
Sbjct: 192 GHGAEIGAQVVGVDTSHYKVLMFVVSAVFASVVGSLFAHKNGFITPDIASFHRSIELVTM 251

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           V+LGGM S+        IL  + ++    + Y                  +    +   +
Sbjct: 252 VVLGGMASIFGSVLGAFILTVLPQMLTAFDDY---------------EAMIFGAIMMGTM 296

Query: 333 LMRSHSLLR 341
           +     LL 
Sbjct: 297 IFLPKGLLP 305


>gi|73543049|ref|YP_297569.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72120462|gb|AAZ62725.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 342

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 52/298 (17%), Positives = 125/298 (41%), Gaps = 15/298 (5%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
           +L + +FA   ++++G  GLLS      +    Y        +G++  + + +      A
Sbjct: 49  VLCFALFACAFNLLIGYTGLLSFGHAAFFGGAGYISGEAMKVWGVTPEIGLILGTAGGAA 108

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
            G ++G  +++ +G Y ++ TL ++++   I ++    T G+ G+    R          
Sbjct: 109 IGYVVGSLAIRRQGIYFSMITLALAQMLFFICLQAP-FTGGEDGLQGIPR---------- 157

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                 F    +  ++ +YYV L +   + ++I+    +      + I++N+    SL  
Sbjct: 158 ---GKLFGVLSLSDDLTLYYVALVIIVAAFALIVRTVHSPFGQILKAIKENEPRAISLGY 214

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
            +   KL+AF +S+A  G+AG+  A      +     +S +  VI + ++GG+ +LS   
Sbjct: 215 DVDRFKLTAFVLSAALSGLAGSIKALVLGFETLTDVHWSMSGSVILMTLVGGLGTLSGPI 274

Query: 286 KATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +++ +      +  +    +  ++  S     T ++     + +L     ++  
Sbjct: 275 VGAFVVVALENKLGDIGAFLASATGFQWFNSLGESVTMVIGAIFVICVLTFRRGIMGE 332


>gi|34763793|ref|ZP_00144707.1| Branched-chain amino acid transport system permease protein livM
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
 gi|237742527|ref|ZP_04573008.1| branched chain amino acid ABC transporter [Fusobacterium sp.
           4_1_13]
 gi|294784954|ref|ZP_06750242.1| branched-chain amino acid transport system permease protein LivM
           [Fusobacterium sp. 3_1_27]
 gi|27886431|gb|EAA23692.1| Branched-chain amino acid transport system permease protein livM
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
 gi|229430175|gb|EEO40387.1| branched chain amino acid ABC transporter [Fusobacterium sp.
           4_1_13]
 gi|294486668|gb|EFG34030.1| branched-chain amino acid transport system permease protein LivM
           [Fusobacterium sp. 3_1_27]
          Length = 324

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 74/335 (22%), Positives = 140/335 (41%), Gaps = 45/335 (13%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L ++   +LF  + +    +Y   + I ILI V+ A  L++ VG LG ++L      +I
Sbjct: 14  VLLIILYFILFSLINSGFISRYQVGILILILINVILAASLNVTVGCLGQITLGHAGFMSI 73

Query: 77  GAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           GAY+  +L             + + +  +++G  G I+G+P+L+  GDYLAI TL   EI
Sbjct: 74  GAYTAALLTKSGFLSGYPGYIVALIIGGVVAGFIGFIIGIPALRLTGDYLAIITLAFGEI 133

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            + +LI++   T G  G+    R                         I  + ++  +  
Sbjct: 134 IR-VLIEYFKFTGGAQGLTGIPR-------------------------INNFTLIYFITI 167

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            S   +  +  +    A   IR+++ A  +      + K  AF +S+ F G+AG  +A +
Sbjct: 168 FSVIFMYSIMTSRHGRAVLAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGGIYAHN 227

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              +    F ++ +I ++ +V+LGGM S +    +  +L  + E+      Y        
Sbjct: 228 LGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAIVLTILPEVLRSFAEY-------- 279

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                     +  + L +++L R   LL       
Sbjct: 280 -------RMIVYPLILIIMMLFRPKGLLGREEFQI 307


>gi|304392928|ref|ZP_07374859.1| urea ABC transporter, permease protein UrtC [Ahrensia sp. R2A130]
 gi|303294926|gb|EFL89295.1| urea ABC transporter, permease protein UrtC [Ahrensia sp. R2A130]
          Length = 388

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 102/356 (28%), Gaps = 33/356 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  +A+    L F    A     Y  ++  + L Y M A  L++V G  G+LSL     +
Sbjct: 23  LLAIAIAIANLGFPPDSALHVPDYAVALLGKFLCYAMLAVSLNLVWGYCGILSLGHSAFF 82

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+G Y+  +   R   +  +                 LP   +  D    A L+   +  
Sbjct: 83  ALGGYAMGMYLMRQIGTRGVYGNPVLPDFMVFLNYKELPWFWYGFDQFWFAALMAMFVPG 142

Query: 135 NILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSS 175
            +   +  +                          +  D  +     +        F   
Sbjct: 143 LLAFVFGWLAFRSRVSGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILGFDIQ 202

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  ++        L   I   + R+         RD +     L       KL  +
Sbjct: 203 TRETRAALFATSAIFLCLFLVITALVTRSRFGKLMIATRDAESRTRFLGYRPEKVKLFVW 262

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            +S+   G+AGA +      I+P  F  + +I V+    +GG  ++        ++ G  
Sbjct: 263 TLSAVMAGIAGALYVPQVGIINPGEFAPANSIEVVIWTAVGGRGTIIGPVIGAFLVNGGK 322

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               G+              F      ++     L  L     ++         +R
Sbjct: 323 SWFTGL--------------FPEVWLFVLGALFVLTTLFLPKGVIGTLREGWIAKR 364


>gi|256783517|ref|ZP_05521948.1| branched amino acid transport system permease [Streptomyces
           lividans TK24]
          Length = 351

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 63/337 (18%), Positives = 131/337 (38%), Gaps = 25/337 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           AV   LLL +    T+   Y  S+ + + +    A GL  +VG  G +SL     +A+G 
Sbjct: 19  AVFVVLLLTVPAVFTRVPFYTMSVAVLMCLQATAALGLVPLVGRAGQISLGQAAFFAVGG 78

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL  R+ ++  L +   A ++ A   ++GL   + +G YLA+ATL    +  ++  
Sbjct: 79  YTSAILTGRWHVNALLALTAGAALAMAVAYVVGLFIFRAQGQYLALATLSFGLVVSSLAN 138

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +   +T    G+     L   G  + +               + +YY++ G+  ++   +
Sbjct: 139 QLP-LTGASNGLAGIPSLAPFGVELDTD--------------LSVYYLVAGVLLVAVLSV 183

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+   +A   + D+  A  +   +    +  A A+++    +AG+ +A     +  
Sbjct: 184 DALLRSPAGDALSALGDSPVATEAAGVSAAALRRGALALAAGLASVAGSLYAHWSSFMDS 243

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                  ++ ++ I  +GG+ +         +++   E    +          F  +   
Sbjct: 244 GQAGLLNSVQLLVIASVGGLRTPWGAPLGALVIVTFSEASKDLIPKV------FPSATGN 297

Query: 319 RHTTLMVIALFLVILMRSHSLLR----LRTPSNFLER 351
               +  IAL  V+L     +       R  S    +
Sbjct: 298 FDIIVYGIALIAVLLFLPRGVGGVTAVRRERSVRKRQ 334


>gi|126727103|ref|ZP_01742940.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2150]
 gi|126703531|gb|EBA02627.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2150]
          Length = 393

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 61/364 (16%), Positives = 129/364 (35%), Gaps = 31/364 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYID-------SMGIQILIYVMFAWGLSIVV 60
           L+K +  L L+ +   +     +        +         +  + +I+ +FA G +I+ 
Sbjct: 4   LDKKNSALLLIVIALTVFAPFLMNPFPQSSGLAQFNAGYPDLMQRFVIFGIFAIGFNILF 63

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G LS        +G+Y+ V +     ++I   I +S +++G   +++G  SL+  G 
Sbjct: 64  GLTGYLSFGHAAFLGVGSYAAVWMFKLLSMNIVPAIVLSVIVAGLFSLLIGFISLRRSGI 123

Query: 121 YLAIATLIMSEIFQNILIK-WKPITNGKAGIYVAD----------RLYFLGTTVRSLIRF 169
           Y +I TL  +++   +      P+TNG+ G+ V +                         
Sbjct: 124 YFSILTLAFAQMSFALAYSVLTPLTNGETGLQVYNDDPQILLGNGPTVTHLFGFEMNSTS 183

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                 +       YYV   M  L+  + + +  +      R I+ NQ        +   
Sbjct: 184 TLALGDWAFQFNMGYYVSAVMMVLAFYLSMRIFNSPFGLMLRAIKTNQTRLNYTGVSTRP 243

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
             L+AF +S  + G+AG   A+       +  +++ +  V+ +VILGG  +L        
Sbjct: 244 YTLAAFVISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLMVILGGAGTLIGPILGAG 303

Query: 290 ILIGVVELCCGMNFYYFNSLLK-------------FDCSFNMRHTTLMVIALFLVILMRS 336
            +     +   +N    +                             + +   L+++   
Sbjct: 304 FIKYFENIFSKINENVLHGWFAALPDGLENAIVWVLHFFVGKGWHLTLGLLFMLIVIFLP 363

Query: 337 HSLL 340
             L+
Sbjct: 364 GGLV 367


>gi|171741641|ref|ZP_02917448.1| hypothetical protein BIFDEN_00727 [Bifidobacterium dentium ATCC
           27678]
 gi|283455042|ref|YP_003359606.1| branched-chain amino acid transporter permease [Bifidobacterium
           dentium Bd1]
 gi|306823907|ref|ZP_07457281.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Bifidobacterium dentium
           ATCC 27679]
 gi|309802452|ref|ZP_07696559.1| branched-chain amino acid ABC transporter, permease protein
           [Bifidobacterium dentium JCVIHMP022]
 gi|171277255|gb|EDT44916.1| hypothetical protein BIFDEN_00727 [Bifidobacterium dentium ATCC
           27678]
 gi|283101676|gb|ADB08782.1| branched-chain amino acid transport system permease protein
           [Bifidobacterium dentium Bd1]
 gi|304552905|gb|EFM40818.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Bifidobacterium dentium
           ATCC 27679]
 gi|308221052|gb|EFO77357.1| branched-chain amino acid ABC transporter, permease protein
           [Bifidobacterium dentium JCVIHMP022]
          Length = 327

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 63/313 (20%), Positives = 123/313 (39%), Gaps = 8/313 (2%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           +      YV+ A GL+I  G  GL+++       +GAY + +     G +++  +  +  
Sbjct: 15  IAPTTAAYVLAAIGLNIHFGMTGLMNMGQAGFMLLGAYGFAV-TQSMGCNLFASVCAALA 73

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIYVADRLYFL 159
           ++    +++G+P+LK   DYLA+ TL  +EI + I        +T G AGI   D     
Sbjct: 74  LAVIYALLLGIPTLKLGPDYLAMVTLAAAEIIRIIGRSTAMTNLTGGSAGISPQDFTEKF 133

Query: 160 ----GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                    S        S+ +    ++  V   +  ++A +      +      + IR+
Sbjct: 134 EALSPLPDGSTTFLLWTYSNNIANSWWLRIVAWILVAIAAFLCWRWFHSPWGRMLKGIRE 193

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  SL   +   K+ +  +   F  MAG  F      + PD    +    V +I++L
Sbjct: 194 DENAIRSLGKPVTKYKMESLILGGLFGAMAGIIFVLP-RSVQPDSLGRTVTFYVWTILLL 252

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  ++      + +L  ++     +        L            ++ +AL  +++ R
Sbjct: 253 GGAATILGPVLGSCVLWVLLTFVKEVMRNTVPETLISSNQIEALGWVIVGVALMCLVIFR 312

Query: 336 SHSLLRLRTPSNF 348
              LL  R    F
Sbjct: 313 PQGLLGDRKELAF 325


>gi|251794594|ref|YP_003009325.1| urea ABC transporter permease UrtC [Paenibacillus sp. JDR-2]
 gi|247542220|gb|ACS99238.1| urea ABC transporter, permease protein UrtC [Paenibacillus sp.
           JDR-2]
          Length = 364

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/329 (14%), Positives = 103/329 (31%), Gaps = 27/329 (8%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-------GSRY 88
             +  ++  + L + + A GL ++ G  G+LSL   I + +GAY+  +        G   
Sbjct: 33  SDFRLNLLAKFLAFAIVALGLDLIWGYTGILSLGHGIFFGLGAYAMAMYLKLEASGGKLP 92

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI------FQNILIKWKP 142
               W  +    +     G       +           L               ++    
Sbjct: 93  DFMGWSGLSELPIFWKPFGSFGFAVLMGILIPAALALFLGYFTFRNRIRGVYFTILTQAL 152

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +      +            V    +    P +    +  +Y+V   +      +  ++ 
Sbjct: 153 VIITTTLLVGQQAYTGGTNGVTGFGKILGEPIASPDTKRMLYWVTAAVLVAVFILCRYVV 212

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           ++      R IRD +     +       ++  F +S+A  G+AG  F      ISP M  
Sbjct: 213 KSRFGKVLRAIRDGENRVRFIGYNPAVYQMVVFTMSAAIAGIAGMLFVLHVGIISPSMMG 272

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
              +I ++  V +GG  +L   A    ++                   +F  ++    T 
Sbjct: 273 IVPSIEMVLWVAIGGRGTLIGAALGAVLMNWAKS--------------EFSTTYPQGWTY 318

Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLER 351
            +     LV++   + +  L     F ++
Sbjct: 319 FLGGVFILVVVFLPNGVAGLAAKLKFRKK 347


>gi|149909706|ref|ZP_01898358.1| putative ureashort-chain amide or branched-chain amino acid
           uptakeABC transporter permease protein, possibly fusion
           [Moritella sp. PE36]
 gi|149807220|gb|EDM67175.1| putative ureashort-chain amide or branched-chain amino acid
           uptakeABC transporter permease protein, possibly fusion
           [Moritella sp. PE36]
          Length = 405

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 99/306 (32%), Gaps = 21/306 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                +  +   GL+I  G +G++++       +GAY+  ++      +I L + +S   
Sbjct: 120 LSLGSVLALAGLGLAITFGVMGVINMAHGELIMLGAYTTYVMQQLMPDNIGLSLVLSIPA 179

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++G+   +    +L    L      + +L  +      +  +           +
Sbjct: 180 AFLVSGLVGIAIERGVIRFLYGRPL------ETLLATFGISLILQQAVRSVFSPLNRSVS 233

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +      +  +       Y+++    +  ++I  L++T +    R +  N+    +
Sbjct: 234 TPDWMSGMLEFNPMLALTYNRLYIIIFCLLVFCTLIFVLKKTPLGLQVRAVSQNRSMARA 293

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +     +     F + +   G+AG   +   +         S  I    +V+ GG+ +L 
Sbjct: 294 MGVRSEWVDAMTFGLGAGVAGIAGVALSQLTNV--GPNMGQSYIIDSFMVVVFGGVGNLW 351

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L    +L                         ++++ + L I  R   L   
Sbjct: 352 GTLVAGLTLGLFNKLLEPWAGAVLAK-------------IIVLVFIILFIQKRPRGLFPQ 398

Query: 343 RTPSNF 348
           R  +  
Sbjct: 399 RGRAAE 404


>gi|148926074|ref|ZP_01809760.1| putative branched-chain amino-acid ABC transport system permease
           protein [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145845553|gb|EDK22645.1| putative branched-chain amino-acid ABC transport system permease
           protein [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 350

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 72/341 (21%), Positives = 127/341 (37%), Gaps = 47/341 (13%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-------- 83
                 Y  ++  QI I+++ A   +++ G  G  SL      AIGAY+  +        
Sbjct: 24  PYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIGAYAAALVLLSADAK 83

Query: 84  ------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                       + + +  S  L + V+ + S    +I+     + RGDYLAI TL    
Sbjct: 84  NDQFFLDGPSSFILAIHSNSFILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGI 143

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +   I +  ITNG  G+    +                             Y   G+ 
Sbjct: 144 IIKIAAINFPSITNGSRGLVDIPQFS-------------------------TIYWTGGIA 178

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            ++  +IL +  +    A + IRD++ A  ++     + K  AF+ S+   G+ G   A 
Sbjct: 179 IVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFSTSAFLEGVGGGLLAC 238

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN--SL 309
               +SP  F F     ++ I++LGG+ S +       ++IG  E    ++       SL
Sbjct: 239 LLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEWLRFLDELNIKIDSL 298

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                S       +  I L LV+L     ++     S+ + 
Sbjct: 299 NLDIQSMPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 339


>gi|312961233|ref|ZP_07775738.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
 gi|311284891|gb|EFQ63467.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
          Length = 355

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 68/337 (20%), Positives = 132/337 (39%), Gaps = 16/337 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +   +     F+ +    +  +  ++ + +L+  +   GL+++ G  G LSL      A+
Sbjct: 27  IGLWLLLGFAFVAMPWLGNDYWFSAILVPLLVLSLAGLGLNLLTGYAGQLSLGSAAFMAV 86

Query: 77  GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GA++   +     GL + L   +  +I+    +  GLPSL+ +G YL +ATL    + + 
Sbjct: 87  GAFAAYNLQLRVPGLPLLLSFALGGVIAALVAVFFGLPSLRIKGFYLLVATLAAQFVVEW 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L ++   TN  A   +                               Y + L +     
Sbjct: 147 VLTRFSWFTNDNASGVITSPPL-------------LIAGLDFSSPRGRYVLTLAVVVALF 193

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRD 254
            +   L R+ +   W  +RD   A   +   ++ AKL AFA+S  ++G+AG+ +A     
Sbjct: 194 WLGKNLVRSELGRNWMAVRDMDTAAAVIGIRLLKAKLLAFAISGFYLGVAGSLWAFTYLG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            + P  F  S +  V+ I+I+GG+ S+       A ++    L   +       L+    
Sbjct: 254 TVEPHGFDLSRSFQVLFIIIIGGLGSVLGNVLGAAFIVLFPILLGNLFALLPAGLMDAGQ 313

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             N++   L    +   ++     L RL        R
Sbjct: 314 LENIQKM-LFGALIITFLIKEPEGLARLWQRFRQRAR 349


>gi|261855702|ref|YP_003262985.1| urea ABC transporter permease [Halothiobacillus neapolitanus c2]
 gi|261836171|gb|ACX95938.1| urea ABC transporter, permease protein UrtB [Halothiobacillus
           neapolitanus c2]
          Length = 561

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 92/297 (30%), Gaps = 21/297 (7%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       IGAY+  +L       +   + ++   +     I+G
Sbjct: 285 AAIGLAITFGVMGVINMAHGEMMMIGAYTTWLLQQLMPNHLTAALFLAIPSAFLAAGIIG 344

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           +   +    +L    L      + +L  +      +    +          +   +    
Sbjct: 345 MAIERGLIRFLYGRPL------ETLLATFGLSLMLQQAARIIFTPLNRAVALPDFMSNSW 398

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
             +          Y+L+    +  +++L L+R+      R +  N+    +      +  
Sbjct: 399 VVNPVFAITYNRLYILIFSLTVFFALLLLLKRSTFGLRIRAVAQNRAMARACGVRSNWID 458

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   A   +         S  +    +V+LGG+ +L     A   +
Sbjct: 459 ALTFGLGSGIAGIAGVALAQITNV--GPNLGQSYIVDSFMVVVLGGVGNLWGTLVAGMGI 516

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             + +     +      ++       +                R   L   +  +  
Sbjct: 517 GVLNKFLEPYSGAVLAKVVVLVLVILVIQK-------------RPRGLFPQKGRAAE 560


>gi|258645959|ref|ZP_05733428.1| amino acid ABC transporter, permease protein [Dialister invisus DSM
           15470]
 gi|260403328|gb|EEW96875.1| amino acid ABC transporter, permease protein [Dialister invisus DSM
           15470]
          Length = 320

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 57/309 (18%), Positives = 117/309 (37%), Gaps = 17/309 (5%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y   +   + I ++ A  + + +   G+LSL      + GAY+  IL ++Y + + 
Sbjct: 4   LLNGYFLQVLTFVCINIILAMTIYMTL-CTGILSLGNAGLMSFGAYTSAILTAQYHVPMP 62

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + I +  +++    +++GLP+++ RG YLAIATL   E+ + I +  +          + 
Sbjct: 63  VGIFLGGVMAVLVALVIGLPTIRLRGLYLAIATLGFGEVVRVIALNLEITHGALGYSGIP 122

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS-IILWLRRTAISNAWRT 212
                L                       +  ++L +  +        L  + I  A   
Sbjct: 123 SMGSVLSDYASDWGLLDALEIDSQTGGQLLVCLVLLVLTVLIISFWYRLEHSRIGRAMAA 182

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           ++ ++ A       +++ K+  F  S+ F G+AGA +A     ISP  F +   + ++  
Sbjct: 183 VKADEYAASLSGINVVYYKMMGFLFSAFFAGVAGALYAHVTFFISPTDFSWHRVVDMLLY 242

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            + GG   +       A+L  V E    +  Y                  +  + L  ++
Sbjct: 243 TVFGGSNVMWGPVLGAAVLTIVPESLRSLAEY---------------RDIIYGVMLVALM 287

Query: 333 LMRSHSLLR 341
             R   +L 
Sbjct: 288 AFRPDGILS 296


>gi|218282090|ref|ZP_03488389.1| hypothetical protein EUBIFOR_00964 [Eubacterium biforme DSM 3989]
 gi|218216883|gb|EEC90421.1| hypothetical protein EUBIFOR_00964 [Eubacterium biforme DSM 3989]
          Length = 318

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 76/341 (22%), Positives = 144/341 (42%), Gaps = 43/341 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           LNK +    LL+VV  ++L + +       Y       I I ++ A  L++V+G  G  S
Sbjct: 6   LNKANFAWLLLSVVSFVVLTILMKVGIIGSYYSITLYNIFINIILAVSLNLVIGVCGQFS 65

Query: 68  LNCVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           L       IGAY   I+         + + + +  ++S    +I+ +P+L+ +GDYLAIA
Sbjct: 66  LGHAGFMCIGAYCAGIMVKMMPNMTGLVIGVLIGFVLSTIVALIVSIPTLRLKGDYLAIA 125

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL  +EI + ++   + ITNG AG+    +L                             
Sbjct: 126 TLGFAEIVRILVQNME-ITNGAAGLNGIPKLTTFP------------------------- 159

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +L     +S  ++     +A   A  +IR+++ A  ++       K+ AF + +    +A
Sbjct: 160 LLFVCAVISILVVCNFTHSAPGRACLSIREDEIASEAMGINTTKYKVIAFVIGALLASLA 219

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA FA +   I PD F F+++I ++ +V+ GGM S++    A   +  +  +    +   
Sbjct: 220 GALFACNFYVIKPDQFTFNKSIDILVMVVFGGMGSMTSSVLAAVAIGIINVVLANFSE-- 277

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                            +  +AL  +++ +   +L  +  S
Sbjct: 278 -------------IRMIIYGLALVGIMIFKPTGILGTKELS 305


>gi|296269442|ref|YP_003652074.1| inner-membrane translocator [Thermobispora bispora DSM 43833]
 gi|296092229|gb|ADG88181.1| inner-membrane translocator [Thermobispora bispora DSM 43833]
          Length = 358

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 62/317 (19%), Positives = 123/317 (38%), Gaps = 4/317 (1%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L      +  L       + +    G+  +   + A GL+++ G+ G LSL   +  A G
Sbjct: 16  LIAWLAAVAVLVAVPFYLEAFWLQTGLFAMSAAIGAIGLNLLTGATGQLSLGHALFLAAG 75

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYSY++     GL   +    + +++G  G +    + + +G YL IATL +  + Q++L
Sbjct: 76  AYSYIVFAEDAGLPTPVAAACAVVLAGVIGGLFSPIAGRLKGAYLGIATLALIFVGQHVL 135

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
               P+T G  G  V     F                        ++Y+ L +   +A+ 
Sbjct: 136 HNAGPVTGGSNGRRVPPMELFGLVFDDRPELV--LLDVPFGALERLWYLGLVLLAGAAAF 193

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +       A   IRD++ A   +   +   + + F +SS + G+AG   A    ++ 
Sbjct: 194 ARGVLAGRPGIAMNAIRDHETAAGVMGVPVTRYRAAVFVLSSMYGGLAGVLLALVFRQVV 253

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--YYFNSLLKFDCS 315
           PD F    ++  ++++++GG+ S++        +  + +L                   S
Sbjct: 254 PDNFGMLLSLDYLAMIVIGGLGSVAGSVLGAVFVSLLPQLLMRYGDVLPLVAEPGTGGFS 313

Query: 316 FNMRHTTLMVIALFLVI 332
                  L   A+  V+
Sbjct: 314 PAEAARILYGAAVVAVV 330


>gi|57237903|ref|YP_179151.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni RM1221]
 gi|57166707|gb|AAW35486.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni RM1221]
          Length = 350

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 71/341 (20%), Positives = 127/341 (37%), Gaps = 47/341 (13%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-------- 83
                 Y  ++  QI I+++ A   +++ G  G  SL      AIGAY   +        
Sbjct: 24  PYIFGDYGLNIVNQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIGAYVAALVLLSADAK 83

Query: 84  ------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                       + + +  S  L + ++ + S    +I+     + RGDYLAI TL    
Sbjct: 84  NDQFFLDGPSSFILAIHSNSFILALIMAGICSSLLALILAFAVFRVRGDYLAIVTLGFGI 143

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +   I +  ITNG  G+    +                             Y   G+ 
Sbjct: 144 IIKIAAINFPSITNGSRGLVDIPQFS-------------------------TIYWTGGIA 178

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            ++  +IL +  +    A + IRD++ A  ++     + K  AF+ S+   G+ G   A 
Sbjct: 179 IVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAFSTSAFLEGVGGGLLAC 238

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN--SL 309
               +SP  F F     ++ I++LGG+ S +       ++IG  E    ++       SL
Sbjct: 239 LLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGGSEWLRFLDELNIKIDSL 298

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
             +  S       +  I L LV+L     ++     S+ + 
Sbjct: 299 NLYIQSTPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIR 339


>gi|72383796|ref|YP_293150.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72123139|gb|AAZ65293.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 343

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 49/322 (15%), Positives = 131/322 (40%), Gaps = 15/322 (4%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             +   + +       +   + ++++ + +FA   ++++G  GLLS      +    Y  
Sbjct: 5   LFIAAVIGIALVLPTFFYPVLLMKVMCFALFACAFNLLMGFTGLLSFGHAALFGSAGYVT 64

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
             +    G+ +   I + ++ S   G++M   +++ +G Y  + TL ++++   + ++  
Sbjct: 65  GYVARDLGIPVEGAILLGSLTSAFLGLLMASLAIRRKGIYFTMITLALAQMIYFLCLQ-T 123

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
           P+T G+ G+    R                     +  ++ MYY +LG+   + ++I  +
Sbjct: 124 PVTGGEDGMQGIPR-------------GRLLGIFDLANDMTMYYFVLGVFVAALALIARI 170

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +      R +++N+    SL       K+ AF +SSA  G+AG+  A      +    
Sbjct: 171 VHSPFGQILRAVKENEARAISLGYDADRYKIVAFVLSSALTGLAGSVKALVLGFETLVDV 230

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL-LKFDCSFNMRH 320
            +  + +V+ + ++GG+ +LS       +++ +      +         +++  +     
Sbjct: 231 HWGMSGMVVLMTLVGGVGTLSGPVVGAVVIMVLENKLGEIGEVLAKVTHIEWFQALGESV 290

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
           T +  +   + +L+    +   
Sbjct: 291 TIITGLTFIVCVLLFRKGITGE 312


>gi|148273747|ref|YP_001223308.1| putative branched-chain amino acid ABC transporter permease
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
 gi|147831677|emb|CAN02646.1| putative branched-chain amino acid ABC transporter, permease
           component [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 323

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 61/307 (19%), Positives = 124/307 (40%), Gaps = 4/307 (1%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
               Y +   GL I  G  GLL+       AIG Y++ I    Y   +W  +  + + S 
Sbjct: 17  TTAAYALATVGLVIHFGFTGLLNFGQAGFMAIGGYAFAITAVMYDWPVWASLLAAIVAST 76

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT-NGKAGIYVADRLYFLGTTV 163
              +I+G+P+L+ R DYL+I T+  +EI +  +   +     G +         F     
Sbjct: 77  VFALILGIPTLRLRADYLSIVTIAAAEIIRLSVKTPEFSDVTGGSEGINGAAAGFNELNP 136

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
               RF     ++   + ++  V  G+  ++  ++  L R+      + +R+++ A  +L
Sbjct: 137 LPEGRFGAGVLTYSADQWWIRIVGWGLVGIACLLVFLLMRSPWGRVLKGVREDEDAVRAL 196

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              +   K+ A  +   F G+AG  F      + PD +       + +I++LGG  ++  
Sbjct: 197 GKNVYSYKMQALVLGGVFGGLAGVVFILP-RSLQPDNYGTQLTFFLYTIMLLGGAATIFG 255

Query: 284 IAKATAILIGVVELCCGMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
               + I    + L  G+     +   L             ++ +AL L+++ R   +  
Sbjct: 256 PVIGSIIFWVTLSLSDGLLSLAVSNDWLPISSTQQGPIRFIIVGVALMLLVIFRPQGIFG 315

Query: 342 LRTPSNF 348
            +  ++F
Sbjct: 316 KKKETHF 322


>gi|145594349|ref|YP_001158646.1| inner-membrane translocator [Salinispora tropica CNB-440]
 gi|145303686|gb|ABP54268.1| inner-membrane translocator [Salinispora tropica CNB-440]
          Length = 337

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 55/329 (16%), Positives = 122/329 (37%), Gaps = 29/329 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L+  L +          ++ + IL + +FA  + +++G  GLLS      + + AY  
Sbjct: 33  ALLVAGLAVALWLPNGLYPAVAVDILCWALFAVAVDLLLGFTGLLSFGHAAFWGVSAYVT 92

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            ++    GL     +   A+ +    + +G  +++  G Y A+ TL  +++   +  +W+
Sbjct: 93  GLVAIHLGLPFPAAVLAGALAAAVLAVPVGYLAVRRTGIYFAMVTLAFAQLVYYVANEWR 152

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G+ G+    R                     +  + + YY +L +  L  +    +
Sbjct: 153 SVTQGENGLQGVPRE---------------LFGLDLTDDYYFYYAILPIVLLGLAGAWRI 197

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +        IRDN     +L   +   KL+ F +S    G+ G  FA S   +S ++ 
Sbjct: 198 VHSPFGRVLVGIRDNPARARALGYPVHRYKLTVFVLSGFVAGLGGGLFAVSHRFVSLEVL 257

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            ++ +   + +V+LGG+ +L        I++ + +      F                  
Sbjct: 258 HWTTSGKAVIVVVLGGIGTLWGGVLGAGIVVRLEDWLSFSGFEAIG-------------- 303

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            +      +V+L+    +    +      
Sbjct: 304 LVTGGIFVVVVLLFRRGIWGTASALARRR 332


>gi|326384258|ref|ZP_08205940.1| ABC transporter-like protein [Gordonia neofelifaecis NRRL B-59395]
 gi|326197123|gb|EGD54315.1| ABC transporter-like protein [Gordonia neofelifaecis NRRL B-59395]
          Length = 914

 Score = 98.8 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 58/336 (17%), Positives = 127/336 (37%), Gaps = 21/336 (6%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +  +I+    +   + +   L    +   +    I  +I+ M A    +V G  G +
Sbjct: 318 RSPRPRRIVVPTLICVAVAVVALL---ITSGSLRLAVISSMIFGMIALSQLVVTGYAGQV 374

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           SL  +     GA++    GS  G+       ++A+++   G+++GLP+L+ RG  L +AT
Sbjct: 375 SLAQLTLAGTGAFALSRFGSNMGIPFPFAPLLAALVAMVIGVVVGLPALRVRGLPLMVAT 434

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L ++   +    +   +  G  G  +     F               +      I    +
Sbjct: 435 LALAVFAEAFWFRNPSLNGGIDGAPIKPPSIFGID--------LGIGAGDGYPRIAFGIL 486

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            L +  ++A  +  LRR+ +  +   +R N+++  S    +   KL AFA++S   G+ G
Sbjct: 487 CLVVLTITALAVAALRRSRLGASMLAVRANERSAASAGIDVGATKLLAFAIASFIAGLGG 546

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +  A  +   +   +     I + +++ + G+TS++    A  +                
Sbjct: 547 SLLAYQQTLAAAGTYAVFSGIALFAVIYIAGVTSITGSLLAGIM----------APGALM 596

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             ++     F   +       L L ++     +   
Sbjct: 597 YFIMDRYLHFGDYYMLASGALLILTVVTSPDGIAGR 632



 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/297 (10%), Positives = 78/297 (26%), Gaps = 7/297 (2%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+        +Y      L +   S G+++          AY++  L     L     +
Sbjct: 6   AYLLLGMGNGAVYAALGLALVMTYKSSGVVNFATGAVALYAAYTFAFLRHGQLLIPIPGL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +  + G   ++  L         + +   ++                    + V   L
Sbjct: 66  DSTVDVGGPWAVMPALIVSVLLASIVGVIAELVVFRPMRTAPVLAKAVAAIGVMLVLQAL 125

Query: 157 YFLGTTVRSLIRFFRF-----PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
             L     +      F          +      ++   +  L+    L L+ T    A  
Sbjct: 126 IALQVGPNTPTVAPIFKQKNLHIGDAVVPTDRLWLAAVIVCLAVCAGLVLKYTRFGIATE 185

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
              +++K       +     L+ +A+SSA   + G   A         +      +  ++
Sbjct: 186 ASAESEKGALLTGLSPDRISLANWALSSATAAIGGIVIAPIVPL--NPIAYTMFIVPALA 243

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
             ++G    +     A  ++  +      +   +                 L  + +
Sbjct: 244 AALVGDFAGIGITVAAGLVIGMLQSETTYLQSIWDAMPDAGMAEAVPLVLILAFLLI 300


>gi|126652406|ref|ZP_01724579.1| branched chain amino acid ABC transporter, permease [Bacillus sp.
           B14905]
 gi|126590827|gb|EAZ84941.1| branched chain amino acid ABC transporter, permease [Bacillus sp.
           B14905]
          Length = 338

 Score = 98.4 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 59/337 (17%), Positives = 121/337 (35%), Gaps = 31/337 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A      +F  L      + +  +  QI I+ + A    I++G  G++S    + + IG
Sbjct: 10  IAFFLLFGIFFILPFVNDSRTLLILLTQIFIFGILAMSYDILLGYTGIVSFGHAMFFGIG 69

Query: 78  AYSYVIL---GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AY+  ++        +   L I +  +++G    ++GL +L+ +  + A+ TL  S +F 
Sbjct: 70  AYTTAVMLKQMENTMVIFVLSIVIGMLLAGLISFLVGLLTLRLKSHFFAMLTLAFSGLFL 129

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  KW+ +T G  G        F                         Y+ +LG   L 
Sbjct: 130 VLAEKWRTVTYGNDGFTFRAPDMFRDRM-------------------TFYFFVLGSLVLI 170

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +     +        +R+N++   SL    +  K+ A  V+      AG+ +A S  
Sbjct: 171 FLALYRFVNSPTGRILIAVRENEQRTKSLGFNTLHYKVIASVVAGIVASFAGSLYAVSLR 230

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++  +      +  + + I+GG+ +L      +A++        G+           D 
Sbjct: 231 FVNTSVMTMDITLDALLMTIIGGVGTLVGPLLGSAVIEYAQHTLSGLAR---------DY 281

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               R      I   L ++     L+       +  R
Sbjct: 282 PIFERWIIFFGILYILAVIFFPKGLIGTLRLLIWKWR 318


>gi|225389093|ref|ZP_03758817.1| hypothetical protein CLOSTASPAR_02839 [Clostridium asparagiforme
           DSM 15981]
 gi|225044845|gb|EEG55091.1| hypothetical protein CLOSTASPAR_02839 [Clostridium asparagiforme
           DSM 15981]
          Length = 335

 Score = 98.4 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 74/325 (22%), Positives = 142/325 (43%), Gaps = 25/325 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   +++ + +        +  + + + +YV+ A  L++ VG LG LSL       +GA
Sbjct: 1   MIACWVVVQIMMATGHMTSLMKGLLVPLCMYVILAVSLNLTVGILGELSLGHAGFMCVGA 60

Query: 79  YSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           +S                +   L + + A+++   G+++G+P L+ RGDYLAI TL   E
Sbjct: 61  FSGAFFTKLTAEAIPNLQVRFILALIIGALVAALFGILIGIPVLRLRGDYLAIVTLAFGE 120

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I    +I    +     GI++A +   L       +            +   + + + + 
Sbjct: 121 II-KNVINVLYVGADANGIHIAMKKADLNLQEGGQVIIEGAKGITGTPKAATFAIGIVLV 179

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+  I+L L  +    A   IRDN+ A  S+   I   KL AF++S++  G+AG  +A 
Sbjct: 180 LLTLFIVLNLMNSRSGRAIMAIRDNRIAAESVGINITKYKLMAFSISASLAGVAGVLYAH 239

Query: 252 SRDR--ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           +      +P  F ++ +I+++  V+LGG+ ++     A  IL  + EL  G+N Y     
Sbjct: 240 NLSSLAATPKSFGYNMSIMILVYVVLGGIGNIRGSIIAAVILTLLPELLRGLNNY----- 294

Query: 310 LKFDCSFNMRHTTLMVIALFLVILM 334
                        +  + L +++L 
Sbjct: 295 ----------RMLIYAVVLIVMMLF 309


>gi|15643894|ref|NP_228943.1| branched chain amino acid ABC transporter, permease protein
           [Thermotoga maritima MSB8]
 gi|4981684|gb|AAD36213.1|AE001771_6 branched chain amino acid ABC transporter, permease protein
           [Thermotoga maritima MSB8]
          Length = 359

 Score = 98.4 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 64/367 (17%), Positives = 132/367 (35%), Gaps = 47/367 (12%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M     +L+     +  +  +  + L L+L       Y   +   I IY + A  L+++ 
Sbjct: 1   MMKMEKKLSARTNFILTVVFLIFMALLLYLADRYMDSYKLRVVRLIAIYGIMAVSLNLIN 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVI-------------------LGSRYGLSIWLLIPVSAM 101
           G  G+ SL       IGAY+  +                     +      +       +
Sbjct: 61  GITGIFSLGHAGFILIGAYTASLLTLSPEQKAMSFIIEPIVPWLANAHTDFFTATVAGGV 120

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           ++     ++G P L+  GDYLAIA+L  +E+ + I +    ITNG  G+           
Sbjct: 121 LAAVFAFLIGWPVLRLSGDYLAIASLGFAEVIRIIALNAISITNGPLGLKGIP------- 173

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                             E    +   G  F++   +  L  ++   A + IR+++ A  
Sbjct: 174 ------------------EYSNIWWCYGWLFVTVLFMASLVNSSYGRALKAIREDRIAAE 215

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMT 279
           ++   +   +L +F + + F G++G+ +A     I P            V+ +++LGG+ 
Sbjct: 216 AMGINVFKHQLLSFVIGAFFAGVSGSLYAHWLTTIDPRTTTLGPMLTFYVLIMIVLGGLG 275

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+S      A+   + E    +   +    +       M    ++     LV++     +
Sbjct: 276 SISGSLIGAALFAILFEWLRDLEEPFTFFGIHVPGIKGM-RILVISAIFILVMIFWQRGI 334

Query: 340 LRLRTPS 346
           +     +
Sbjct: 335 MGREELT 341


>gi|300313996|ref|YP_003778088.1| urea ABC transporter permease [Herbaspirillum seropedicae SmR1]
 gi|300076781|gb|ADJ66180.1| ABC-type urea transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 538

 Score = 98.4 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 86/291 (29%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  +    +       I    +++     I+       
Sbjct: 265 ITFGLMGIINMAHGELLMIGAYTTYVCQLVFRKFFPGAIDAYLVVALPAAFIVAAAVGIA 324

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W        G+        +     S +         +
Sbjct: 325 LER--LVIRWLYGRPLETLLCTWGISLMLMQGVRSIFGAQNVEVANPSWMSGGVTVLGSL 382

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+  ++ L L +T +    R +  N++    +  +     +  F +
Sbjct: 383 VLSYNRIVIVFFALFVVFAVWLILNKTRLGLFVRAVTQNRRMADCVGVSTGKIDMMTFGL 442

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
                G+ G   +   +            +    +V+LGG+  L+    A   L  V + 
Sbjct: 443 GCGIAGLGGVALSQLGNV--GPDLGQGYIVDSFMVVVLGGVGQLAGTVIAAFGLGEVNKF 500

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
              M                      +++ + + I  R   L  L+  S  
Sbjct: 501 LEPMAGAVLAK-------------IAILVFIIVFIQKRPQGLFALKGRSVE 538


>gi|121603463|ref|YP_980792.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120592432|gb|ABM35871.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 355

 Score = 98.4 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 63/326 (19%), Positives = 121/326 (37%), Gaps = 16/326 (4%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           + +    +  +  ++ I  L+  +   GL+++ G  G LSL      A+GA++    G R
Sbjct: 38  VIVPFVGNDYWFSAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAVGAFAAYNFGLR 97

Query: 88  YGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
                 L  + +  + +    ++ GLPSL+ +G YL ++TL         L K+   +N 
Sbjct: 98  LPGLPLLACLFLGGVTAALVAVVFGLPSLRIKGFYLIVSTLAAQFFVSWALTKFGWFSND 157

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            A   ++                           +  Y + L +      +   L R+ +
Sbjct: 158 NASGVISAPPLT-------------IFGVDFSAPVGRYLLTLSVVAALFWLGKNLVRSEL 204

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRISPDMFKFSE 265
              W  +RD   A   +   ++  KL AFA+S  F+G+AG+ +A      + P  F  + 
Sbjct: 205 GRNWMAVRDMDTAAAVIGIPLLKTKLLAFALSGFFLGIAGSLWAFTYLGTVEPHGFDLNR 264

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           +  V+ I+IL G+ S+       A ++    L   +       L+            +  
Sbjct: 265 SFQVLFIIILSGLGSILGNFLGAAFMVLFPLLLSNLAGALPVGLIDPG-QLENLQKFIFG 323

Query: 326 IALFLVILMRSHSLLRLRTPSNFLER 351
             +   ++     L RL        R
Sbjct: 324 ALIIAFLIKEPEGLARLWQRFRERVR 349


>gi|160937754|ref|ZP_02085114.1| hypothetical protein CLOBOL_02647 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439399|gb|EDP17151.1| hypothetical protein CLOBOL_02647 [Clostridium bolteae ATCC
           BAA-613]
          Length = 337

 Score = 98.4 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 60/326 (18%), Positives = 126/326 (38%), Gaps = 25/326 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            + +   +L  +        +++ ++   IL++ +   G +++ G  G +S    + Y I
Sbjct: 12  FIGLGIGVLAAVIFPQVVRIRFVWNLLSLILVWAIVGMGWNVIGGYCGQVSNGHSLFYGI 71

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +  S + +S W+ I +   IS     I+G P L+ +G   AI+T+ ++E  + I
Sbjct: 72  GAYTVGLAVSYFKISPWISIWIGVGISMLIAFIVGKPLLRLKGHVFAISTMALAECTRII 131

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            I WK           +  +                        +  YYV L        
Sbjct: 132 FINWKWCGGATGVYIYSKGVNEWAFMQFKN-------------PLNYYYVFLIFTVAVLV 178

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +I  L ++      RTI+ N+ A  S+       K+ A+ +S+A + + G+ +A     I
Sbjct: 179 LIKCLDKSKFFYYLRTIKGNEMAAESVGINAASYKIRAYMLSAAIVSIGGSLYAQFILYI 238

Query: 257 SPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            P M    + +++++   ++GG+ ++        +L  + E                   
Sbjct: 239 DPSMLMTLNVSMMIVLTAVMGGVGTVLGPVLGAIVLTSISEYSRVYLG-----------Q 287

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
           +      L    + L++L     +L 
Sbjct: 288 YGGLDMILYGTLVILIVLFIPGGILS 313


>gi|90420354|ref|ZP_01228262.1| urea short-chain amide or branched-chain amino acid uptake, UrtA,
           ABC transporter permease [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335688|gb|EAS49438.1| urea short-chain amide or branched-chain amino acid uptake, UrtA,
           ABC transporter permease [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 524

 Score = 98.4 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 91/294 (30%), Gaps = 18/294 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++      S   L P S  I+     ++ 
Sbjct: 245 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQEAIRGSAPWLFPWSLTIALPLAFLVS 304

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
             +       L     +     + +L  +      +  +                     
Sbjct: 305 GFAGLVMERGL--IRFLYGRPLETLLATFGVSLILQQAVRTVFGPTNREVGNPDW-MSGA 361

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++++    +  +++  L RT +    R +  N+K   ++     +  
Sbjct: 362 FDVGLMSVTWNRLWIIVFALVVFLALLAVLNRTPLGLQMRAVTQNRKMASAMGIRTPWVD 421

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              FA+ S   G+AG   A S+             I    +V+ GG+ +L         L
Sbjct: 422 AMTFALGSGIAGVAGV--ALSQIDNVSPSLGQGYIIDSFMVVVFGGVGNLWGTLVGAMSL 479

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
             + +                          ++++ + L I  R   L   +  
Sbjct: 480 GVLNKFLEPYAGAVLGK-------------IIVLVLIILFIQKRPRGLFAQKGR 520


>gi|269954918|ref|YP_003324707.1| inner-membrane translocator [Xylanimonas cellulosilytica DSM 15894]
 gi|269303599|gb|ACZ29149.1| inner-membrane translocator [Xylanimonas cellulosilytica DSM 15894]
          Length = 493

 Score = 98.4 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 102/306 (33%), Gaps = 30/306 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               L+  + + GL++V G+ GL +        +GA    +  + +GL +WL IPV+ +I
Sbjct: 213 LRFGLLLALASIGLNLVFGTTGLSNFAHGEQVTLGAMFGYLSINVWGLPVWLAIPVTLVI 272

Query: 103 SGACGMIMGLPSLK---FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           +GA G +      +    RG  +  A ++   +   +    + +  G++   ++      
Sbjct: 273 AGATGWVQDTALWQPLRRRGTPVMQAMIVTIGLSIALQFTIQMVIGGRSLRVLSGNPTP- 331

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                          + +      +  +         I LWL RT I  A R + DN   
Sbjct: 332 ------------LRIAGITLSQASWVSMAVATVCIVVIALWLTRTRIGQATRAVSDNPAL 379

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +            + +S+    ++G   A S    +         +++ + V LGG+ 
Sbjct: 380 AAATGIDPNRIIRVVWIMSTTLAALSGILVAVSFGAFNW-SLGMQLLLLMFAAVTLGGLG 438

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           +       + ++  VVEL   +                +                R   +
Sbjct: 439 TAFGALVGSILIGLVVELSNLVLPSDLRYASALVILILVLLV-------------RPQGI 485

Query: 340 LRLRTP 345
           L  R  
Sbjct: 486 LGRRER 491


>gi|114563008|ref|YP_750521.1| inner-membrane translocator [Shewanella frigidimarina NCIMB 400]
 gi|114334301|gb|ABI71683.1| inner-membrane translocator [Shewanella frigidimarina NCIMB 400]
          Length = 357

 Score = 98.4 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 67/325 (20%), Positives = 130/325 (40%), Gaps = 19/325 (5%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +    +  L L       Y  ++ IQI    + A GL+I+VG  G +SL     +  GA+
Sbjct: 31  IAVITIALLCLAPFVVDAYYLTLFIQISYLGIAALGLNILVGYTGQISLGHGAFFGFGAF 90

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +   L + +G+ + L IP++  ++   GMI GLP+ + +G YLAIATL    I ++   +
Sbjct: 91  ASAWLNTSFGIPVLLCIPLAGFLTMGVGMIFGLPASRIKGLYLAIATLAAQFILEDFFAR 150

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
               + G +G        F                         +YV L           
Sbjct: 151 ADWFSGGSSGSSADPISLFGFVFDTDE---------------SFFYVALFALVFMYIWGC 195

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L R+    A+  +RD+  +   +   +   +L +F VSS + G+ GA +A     +S +
Sbjct: 196 NLMRSREGRAFIAVRDHYLSAEIMGIKLNKYRLLSFGVSSFYAGIGGALYAHYLGYVSAE 255

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG----MNFYYFNSLLKFDCS 315
            F    +I  ++++I+GG+ S+         ++ + E+       M    + ++      
Sbjct: 256 GFTLFMSIQFLAMIIIGGLGSIKGTLMGVVFMVFLPEVLESGVGLMKMTDWGNIPAVVDG 315

Query: 316 FNMRHTTLMVIALFLVILMRSHSLL 340
                   + + + L ++     + 
Sbjct: 316 LAYIKEMAIGLVIILFLIFEPEGMA 340


>gi|84514630|ref|ZP_01001994.1| branched-chain amino acid ABC transporter, permease protein
           [Loktanella vestfoldensis SKA53]
 gi|84511681|gb|EAQ08134.1| branched-chain amino acid ABC transporter, permease protein
           [Loktanella vestfoldensis SKA53]
          Length = 358

 Score = 98.4 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 79/344 (22%), Positives = 136/344 (39%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F +  +++     L      ++ F  +    +  + +++ +  LIY + A GL+I+ G  
Sbjct: 20  FPIAFDRWRYWAVL------VIAFCVVPFFVNAYWANAILVPFLIYAIAAIGLNILTGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ S   +SI + I ++  I+ A G   GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKLMTSFPDVSIVIHIILAGGITAAVGAAFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  K     N                            +        
Sbjct: 134 AVATLAAQFFLVWMFNKVSWFYNYS---------ASGQINAPERFVAGIAVTGPNTAPWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y + L    + A I   L R  I  +W  IRD   A   +    + AKL+AFAVSS FI
Sbjct: 185 QYMICLVFLTICALIARNLTRGTIGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFI 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G++GA F A         + F   ++ +V+ ++I+GG+ SL       A L+ +      
Sbjct: 245 GISGALFFAVYLGAVEVGEAFGIQKSFLVLFMIIIGGLGSLFGSFAGAAFLVLLPVALKV 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +                     ++   +   ++   H L +L  
Sbjct: 305 IGVDLLGWPTDL---VAHLQLVIVGGLIMFFLIKEPHGLAQLWR 345


>gi|186684723|ref|YP_001867919.1| urea ABC transporter inner membrane protein UrtC [Nostoc
           punctiforme PCC 73102]
 gi|186467175|gb|ACC82976.1| urea ABC transporter, inner-membrane subunit UrtC [Nostoc
           punctiforme PCC 73102]
          Length = 385

 Score = 98.4 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 51/349 (14%), Positives = 100/349 (28%), Gaps = 27/349 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R      ++ +  VV   L  + +      ++  ++  + L   + A G+ ++ G  GL
Sbjct: 14  MRKKGGGLLIEVGVVVAIALFLIIVMPLVLSEFRLNLLGRFLSLAIVALGIDLIWGYTGL 73

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           LSL   I + +G Y+  +       +  L   +                       L + 
Sbjct: 74  LSLGHGIFFGLGGYAIAMYLKLQVPTGELPDFMGLYGVTELPAFWKPFYSFPLTIALVVI 133

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF-------------FRF 172
              +       L+    +      I                 +F             F  
Sbjct: 134 IPGLLAGLLGYLVFRNRLKGVYFSILTQAGTIVFFNFFNGQQQFFNGTNGLIDFTTLFGA 193

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
             S    +   Y + +     +  I  WL           IRD++             K+
Sbjct: 194 TVSDAKTQFVFYTLTVVFLAATYGICRWLTTGRFGRLLIAIRDDESRVRFSGYDPTDFKV 253

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             FAVS A  G+AGAF+      +SP     + +I ++  V +GG  +L      T ++ 
Sbjct: 254 LVFAVSGAIAGIAGAFYTIQSGSVSPRAMDIAFSIEMVIWVAVGGRATLIGAIVGTLLVN 313

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                                  F             +V+ +    ++ 
Sbjct: 314 YARTFLSE--------------QFAEIWLFFQGALFLIVVTVLPDGIVG 348


>gi|188591677|ref|YP_001796276.1| putative Branched-chain amino acid transport system, Inner-membrane
           component [Cupriavidus taiwanensis]
 gi|170939072|emb|CAP64088.1| putative Branched-chain amino acid transport system, Inner-membrane
           component [Cupriavidus taiwanensis LMG 19424]
          Length = 334

 Score = 98.4 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/317 (15%), Positives = 124/317 (39%), Gaps = 15/317 (4%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L +           + ++I+ + +FA   ++++G  GLLS      +    Y       
Sbjct: 1   MLGIALLLPNFVYPVLLMKIMCFALFACAFNLLMGFTGLLSFGHAALFGAAGYVTGYAAR 60

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+ +   I +  ++S   G +M   +++ +G Y  + TL ++++   + ++   +T G
Sbjct: 61  DLGIPMEGAIVLGMVVSAILGFLMASLAIRRKGIYFTMITLALAQMVYFVCLQAP-VTGG 119

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
           + G+    R                     +  +  MY+V+L +   + ++I  + ++  
Sbjct: 120 EDGMQGIPR-------------GKLLGVLDLGDDTTMYFVVLAIFVAALALITRIVQSPF 166

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R +++N+    SL       KL AF +SS   G+AG+  A      +     +  +
Sbjct: 167 GQILRAVKENEPRSISLGYDADRYKLMAFVLSSVLTGLAGSVKAIVLGFETLVDVHWGLS 226

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL-LKFDCSFNMRHTTLMV 325
            +V+ + ++GG+ +L        +++ +      +      +  +++  +     T +  
Sbjct: 227 GMVVLMTLVGGVGTLIGPIVGAVVIMVLENELGEIGEALATATHIEWFDALGESVTIVTG 286

Query: 326 IALFLVILMRSHSLLRL 342
           +     +L+    +   
Sbjct: 287 LTFIFCVLLFRKGIAGE 303


>gi|187929271|ref|YP_001899758.1| urea ABC transporter permease protein UrtB [Ralstonia pickettii
           12J]
 gi|187726161|gb|ACD27326.1| urea ABC transporter, permease protein UrtB [Ralstonia pickettii
           12J]
          Length = 543

 Score = 98.4 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 79/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ + +              +     +        
Sbjct: 269 ITYGLIGVINMAHGEFLMIGAYATYVVQTIFRTYFPSAFDWYLPAALPAAFLAAAIVGFA 328

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         +        +     S +         +
Sbjct: 329 LER--LVLRHLYGRPLETLLATFGISLLLMQAVRSIFGAQNVEVANPSWMSGGIALYPGL 386

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +LL    + A     L RT +    R    N+     +          AFA 
Sbjct: 387 ILPYNRLVILLFALAVVAIAWAVLNRTRLGLFVRATTQNRTMAACVGVRTWKVDSYAFAF 446

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  L+        L  + + 
Sbjct: 447 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTIIGAFGLGLINKF 504

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                    ++++ + L I  R   L  L+  S  
Sbjct: 505 IEPFYGAVLAK-------------IIVLVLIVLFIQKRPQGLFALKGRSAE 542


>gi|206895708|ref|YP_002247684.1| branched-chain amino acid ABC transporter, permease protein
           [Coprothermobacter proteolyticus DSM 5265]
 gi|206738325|gb|ACI17403.1| branched-chain amino acid ABC transporter, permease protein
           [Coprothermobacter proteolyticus DSM 5265]
          Length = 317

 Score = 98.4 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 74/307 (24%), Positives = 135/307 (43%), Gaps = 29/307 (9%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             ++  I +     +IY + A GL++++G  G +SL       IG Y+  IL  RYG+  
Sbjct: 21  FNARPSIVAYINLAIIYAVSAVGLNLLLGVAGQISLGHAAFMGIGGYTSAILMIRYGIPS 80

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            + +    +++G  G+I+G P+L+ +G YLAIAT+ +     +++ + + +     G+  
Sbjct: 81  IVSVLAGGLLAGLFGLIIGFPALRLKGFYLAIATMALGTAVTDVIKRMEIL-GADRGLTN 139

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
              +   G    S    +    + ++  IF              ++  L ++    A+R 
Sbjct: 140 VPPVTIFGYQFSSEFAKYYLYLAILLLTIF--------------LVNNLLKSKTGMAFRA 185

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +RD++ A       I + K+ AF +SS   G+AGA +  S   + PDMF F  +I  ++I
Sbjct: 186 MRDSEVAAKVFGINISYYKVLAFVISSFLAGVAGAMYGHSLSYLHPDMFGFGLSIEFLAI 245

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            I+GG+ +L      +A+ + V  L              F          L  + L LV+
Sbjct: 246 TIIGGIGTLWGPVLGSALWVIVPRL--------------FGTKLEAMAGVLFGVILILVV 291

Query: 333 LMRSHSL 339
           L     L
Sbjct: 292 LFLPRGL 298


>gi|327398220|ref|YP_004339089.1| ABC transporter integral membrane subunit [Hippea maritima DSM
           10411]
 gi|327180849|gb|AEA33030.1| ABC-type transporter, integral membrane subunit [Hippea maritima
           DSM 10411]
          Length = 314

 Score = 98.4 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 74/322 (22%), Positives = 130/322 (40%), Gaps = 30/322 (9%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
                L +          S+    LIY   A    IV+G  G+  +   I + +GAYS  
Sbjct: 11  VFFAALIIVPFIFNSNWTSVFTTFLIYSAVALSQDIVLGRAGMFDMGHAIFFGLGAYSTA 70

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-IKWK 141
           IL   YG  I   IPV+ ++     +++  P +  RGDYL + T+  + +F   L     
Sbjct: 71  ILNMVYGWPILATIPVAIILPVIASILLAAPIIHLRGDYLLVTTIGFNIVFIQALKNNVF 130

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            IT G  GI+  + L   G +  S                 +Y++   +  L+  II  L
Sbjct: 131 GITGGPNGIFGVEPLKLFGFSFSSQT--------------SIYFLAFFVLILTLIIIHNL 176

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +    A   + ++  A   +     F +L AF +S+A  G+AG  F      +SPD F
Sbjct: 177 ETSKPGRALHYLNEDSLASECIGINTRFYRLYAFGLSAAVAGLAGVVFTLQFSAVSPDAF 236

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F ++++  +IV++GG +S+  +   T  +  V E+                        
Sbjct: 237 DFIQSVLFFTIVLVGGPSSIPGVLLGTFFMFVVPEMFRQFAE---------------ARY 281

Query: 322 TLMVIALFLVILMRSHSLLRLR 343
            +  IA+ L+++ R   +  ++
Sbjct: 282 LVFGIAMILIMIFRPKGIWPVK 303


>gi|300697314|ref|YP_003747975.1| ABC transporter permease/ATP-binding protein [Ralstonia
           solanacearum CFBP2957]
 gi|299074038|emb|CBJ53575.1| ABC transporter, permease protein (N-ter) and ATP-binding protein
           (C-ter) [Ralstonia solanacearum CFBP2957]
          Length = 608

 Score = 98.4 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 113/299 (37%), Gaps = 15/299 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L  V  +++   L    + ++  ++   I +Y + A GL ++ G  GL S        +G
Sbjct: 22  LLTVAFVIVLALLPVLPTPEFWITLLNYIGLYSLVALGLVLLTGVGGLTSFGQAAFVGLG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYS   L ++YGLS WL +     I+ A   ++GL +++  G YL +AT+        + 
Sbjct: 82  AYSTAYLTTQYGLSPWLGLLAGLTITMASAYVIGLITMRMSGHYLPLATIAWGLSLFFLF 141

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
              + +                     + I         +     M+Y++  +  ++   
Sbjct: 142 GNLEFL---------------GKYDGLNGIPVLNLLGKPLQSGREMFYLIWAVVVVAVLA 186

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  +    A R ++       ++     + K+  F  ++    ++G  +A  +  ++
Sbjct: 187 VQNLLNSRPGRAIRALKGGGTMAEAMGVNTAWMKVVIFVAAAILACISGFLYAHLQRAVN 246

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P  F  +  I  + + ++GG+  +        +L  + +    +      S   F+   
Sbjct: 247 PTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGLLTILKDSLQSLLPQLLGSTGNFEIIV 305


>gi|284166156|ref|YP_003404435.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511]
 gi|284015811|gb|ADB61762.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511]
          Length = 652

 Score = 98.4 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 75/335 (22%), Positives = 137/335 (40%), Gaps = 15/335 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+   +    LA V  L L      T    Y  ++ I+IL++ +FA  L  V+G  GL+S
Sbjct: 304 LDDRTRKWVGLAAVGLLALLPLGAGTFYSTYTVTLAIEILVWALFALSLDFVMGYTGLVS 363

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L   + Y +GAY+  I+      S ++ I ++ +IS A   ++G  S++  G Y A+ TL
Sbjct: 364 LGHALFYGLGAYAVAIVLLHVSQSAFVAIGLAIVISAAIAWVVGYLSIRVSGVYFAMITL 423

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +E+F N+L + +     +    ++      G  +             +  +   YY+ 
Sbjct: 424 GFAELFYNMLYRLEITGGSEGLFGISTYYGIAGVGIALDEIGLFLGPVALTGQSLFYYIA 483

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L     S  +   +  +   +  ++IR+N++    L       K  AF VS A  G+AG 
Sbjct: 484 LAALIGSFLLTRRMLNSPFGSVLKSIRENEQRATFLGYETTRYKRRAFVVSGALAGLAGG 543

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            F  +    +P    +  +  VI +VILGGM +L      + +  G+ E+       +  
Sbjct: 544 LFTLNSGYAAPSFAYWLHSGEVIVMVILGGMGTLYGPIVGSTVFFGLEEILTDFTPRW-- 601

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                          ++     L ++     L+ L
Sbjct: 602 -------------RLVLGTLFLLFVIFLPRGLVSL 623



 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 105/303 (34%), Gaps = 27/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLSIWLLIP 97
           +       ++YV+ A GLS++ G + +++      +A+GAY +  ++    G + +  + 
Sbjct: 9   LVDGLTIGVVYVLLAAGLSVIFGVMHVINFAHGELFALGAYFALALITPFGGTAFFAALF 68

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           V+ ++ G  G+ +   +++       +  ++++     ++     +      + +     
Sbjct: 69  VAPLLVGILGVAIERFTVRPLYGRNPLYHILLTFGLVLVINDLIYLIWEPGNVNLPTPAI 128

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
             GT               +   ++  +V++    ++ S+   L  T      R    ++
Sbjct: 129 LSGT----------IDVIGLNASVYNVFVIVFGAAMALSVWAMLEYTKYGLIIRAGSQDR 178

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +   +L   I       F + +A   +AG      +          S  I    IV+LGG
Sbjct: 179 QMVRNLGIDIDRYYSLVFGMGAALAAVAGIILGGYQTV--SPEMGMSVIIPAFVIVVLGG 236

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S         ++  +  L                         ++ + +  ++L+R  
Sbjct: 237 LGSFKGAVAGGLLVGIIQTLLRTYAPILEG--------------MVIFLLMISILLVRPR 282

Query: 338 SLL 340
            L 
Sbjct: 283 GLF 285


>gi|116748303|ref|YP_844990.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
 gi|116697367|gb|ABK16555.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
          Length = 345

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 61/347 (17%), Positives = 124/347 (35%), Gaps = 45/347 (12%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A +      ++  +    +Y   +   + +++  A   ++V G  G+L L      AIGA
Sbjct: 13  AALLLAACVIYAFSRYGSEYHIRILNNMAVFIALAVSYNLVNGFCGILHLGPNGFIAIGA 72

Query: 79  YSYVILGSRY-------------------GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           Y+  +L                        +   L +  + +++G   + +  P  + RG
Sbjct: 73  YTAALLTMSPAEKQLNFIIEPLIWPLNVIQVPFALSLVAAGLVAGLFALAISFPVFRVRG 132

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           DYLAI TL   E+ + +   ++ +TNG  G+                             
Sbjct: 133 DYLAIVTLGFGEVVRVLCNAFQNVTNGPLGLKGLVPHTN--------------------- 171

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
                +   G+   +  ++  L  ++   A + IR+++ A  S+        L AF +S+
Sbjct: 172 ----LWWSWGVAIATIIVVNRLMNSSYGRAMKAIREDETAARSVGIDPFRHLLLAFVISA 227

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
              G+AG   A     ISP +F F     ++ ++++GG+ S +      A+     E   
Sbjct: 228 FISGVAGGLLAHLITTISPTLFTFFLTFNLLIMIVVGGLGSTTGAVVGAALFAWGGEALR 287

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
            +       ++            +    L LVI+     ++     S
Sbjct: 288 IVERPMDLGIVIIP-GIPGMRMVVFSFILMLVIIFARRGIMGQNEFS 333


>gi|242238064|ref|YP_002986245.1| inner-membrane translocator [Dickeya dadantii Ech703]
 gi|242130121|gb|ACS84423.1| inner-membrane translocator [Dickeya dadantii Ech703]
          Length = 347

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 77/365 (21%), Positives = 132/365 (36%), Gaps = 44/365 (12%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +        L  +A+     L L    +    YI  +   I I+++ A   +++ G  G 
Sbjct: 3   MPQTSPATFLGYIALFALTFLALAALESLFDDYIVRIFCNIFIFMLLAVSYNLINGVTGQ 62

Query: 66  LSLNCVIAYAIGAYSYVI-------------------LGSRYGLSIWLLIPVSAMISGAC 106
           LSL      AIGAY   I                   +      S    + +S + +   
Sbjct: 63  LSLEPNGFVAIGAYITAILLLTADTKINMFEMAAPSPVILILHTSFLPALVISGICASVV 122

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
            + +  P  + RGDYLAI TL    I +   I    ITNG  GI    +           
Sbjct: 123 AVCLAFPVFRVRGDYLAIVTLGFGFIIKIFAINNPQITNGAIGINEIPQASH-------- 174

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                           + Y    +  ++  +IL L  +    A + +RD++ A  ++   
Sbjct: 175 ----------------ILYWCGFIALIAVVLILQLVYSKYGRAMKAVRDDEDAAIAMGIN 218

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
               K  AFA S+ F G+ G   A+    ISPD+F F     ++ I++LGG+ S +    
Sbjct: 219 TFKIKTCAFATSAFFEGIGGGLLASLLTIISPDLFDFMLTFQLLIIIVLGGLGSTTGAIL 278

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
            T +++G  E    ++         F          +  + L +++L     LL  +   
Sbjct: 279 GTVVVVGSGEWLRFLDQPLTLFGQDFGAH-PGLRMVVFSLVLLVIMLFAREGLLGKQEIW 337

Query: 347 NFLER 351
           +   R
Sbjct: 338 DMRRR 342


>gi|313902320|ref|ZP_07835724.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Thermaerobacter subterraneus DSM 13965]
 gi|313467368|gb|EFR62878.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Thermaerobacter subterraneus DSM 13965]
          Length = 342

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 30/310 (9%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y   +G    ++ +    L+ ++G  G  +L     +A GAY+  IL +R  + + +L
Sbjct: 37  NGYYLEIGFNFFLWAVLGLSLNFILGGTGQYNLGHAAFFAAGAYTTAILNTRLDIPVLVL 96

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-IKWKPITNGKAGIYVAD 154
            PV+A+++G   + +  P +  RGDYL I T+  +EI +  L      +T G  GI   D
Sbjct: 97  APVAALVAGVLAVAVARPIIHLRGDYLLIVTVGFAEIVRITLRNNVFGLTGGSNGILGID 156

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
           R   LG  +  +   +      ++  +F              I + L  + I  AW  IR
Sbjct: 157 RPVILGFRLAQMSHLYYLSLVLLLLTLF--------------IAVRLENSRIGRAWSYIR 202

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           +++ A  ++       K+ AFAV  A  G+AG  +AA    I+P+ F F E++++ +IVI
Sbjct: 203 EDEVAAAAMGIDTGRYKVLAFAVGGALAGLAGNVYAAKMTVIAPESFSFWESVVMFAIVI 262

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           LGG  S+  +   T  ++ + +L  G+  Y                  +   A+ L+++ 
Sbjct: 263 LGGTGSIPGVFLGTFGMVVLPQLFRGLADY---------------RMLVFGAAMVLLMIF 307

Query: 335 RSHSLLRLRT 344
           R   L   R 
Sbjct: 308 RPEGLWPNRR 317


>gi|296453275|ref|YP_003660418.1| inner-membrane translocator [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296182706|gb|ADG99587.1| inner-membrane translocator [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 473

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 96/305 (31%), Gaps = 28/305 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I  L+  + + G+++V G+ GL S +      +G     +      + +      + +I
Sbjct: 193 IIFGLMLGLMSVGMNLVYGTTGLQSFSHGEQVTLGGLMAFVGTQMLHMPLVASAIFAVII 252

Query: 103 SGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
               G I          R     +  +I++      L        G     +        
Sbjct: 253 GALTGFIQNEIVWGPLRRRHVGTMQQMIVTIGLSMALQYTFQFFFGGDIKGIV------- 305

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                      F    +  ++      L    +   + L+L +T +  A R + DN    
Sbjct: 306 -----KSVPNSFQIGPITTDMPTLLSALIAICVIVGVTLFLYKTRLGRATRAVSDNAALA 360

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +    +       + +S A   ++G       + IS +    +  +++ + V LGG+ +
Sbjct: 361 AASGINVDQVVRVVWILSCAMAALSGVLLGVYLNGISWNT-GATLILLMFAAVTLGGLGT 419

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
            +     + ++  V ++   +               N       +  L +V+L+R   + 
Sbjct: 420 ANGALIGSLVIGIVADMSSLVIP-------------NDMRYASALAILIIVLLVRPQGIF 466

Query: 341 RLRTP 345
             +  
Sbjct: 467 GKQQR 471


>gi|218674050|ref|ZP_03523719.1| amino acid ABC transporter, permease protein [Rhizobium etli GR56]
          Length = 201

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 63/187 (33%), Positives = 108/187 (57%), Gaps = 2/187 (1%)

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
              + F+ P S   Y+IF++Y++L +C L+A + + LRR  I  AW  +R+++ A  SL 
Sbjct: 3   GFAKLFQLPMSSAYYKIFLFYLILMLCMLTAYVTIRLRRMPIGRAWEALREDEIACRSLG 62

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
              +  KL+AFA  + F G AG+FFAA +  +SP+ F F E+ +V++IV+LGGM SL+ I
Sbjct: 63  INTVTTKLTAFATGAMFGGFAGSFFAARQGFVSPESFIFLESAVVLAIVVLGGMGSLTGI 122

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           A A  +++G  E    M+  +  ++   D +  +    L  +A+ +V+L +    +  R 
Sbjct: 123 AIAAIVMVGGTEALREMD--FLKAVFGPDFTPELYRMLLFGLAMVVVMLFKPRGFVGSRE 180

Query: 345 PSNFLER 351
           P+ FL+ 
Sbjct: 181 PTAFLKE 187


>gi|163792464|ref|ZP_02186441.1| ABC-type transporter, permease component: HAAT family protein
           [alpha proteobacterium BAL199]
 gi|159182169|gb|EDP66678.1| ABC-type transporter, permease component: HAAT family protein
           [alpha proteobacterium BAL199]
          Length = 358

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 69/328 (21%), Positives = 127/328 (38%), Gaps = 13/328 (3%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  +   +   + +    ++ ++ S+ I +LI  + A GL+I+ G  G +SL      A 
Sbjct: 27  LFVIGVVVAAIVVVPLISNEYWLGSIMIPVLILSIAALGLNILTGYCGQVSLGTGAFMAA 86

Query: 77  GAYSYVILGSRYGLSIW-LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GAY    + + +      L+I +  + + + G+  GLPSL+ +G YLA+ TL        
Sbjct: 87  GAYMAYKIATNFTWMPIPLVIVLGGLCAASIGLAFGLPSLRIKGFYLAVTTLAAQFFLLW 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +  K     N  A                    F    +         Y  +L    + A
Sbjct: 147 LFQKVPWFVNNSASGVPTAPP---------RSVFGELVTGAEATPEARYLFVLAFTVVLA 197

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRD 254
            I   L R  I   W  IRD   A   +    +  KLSAFA+SS + G++GA ++    +
Sbjct: 198 VIAGNLVRGRIGRTWMAIRDMDIAAELIGIRPLHTKLSAFAISSFYCGVSGALWSFCYIN 257

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            +    F    + +++ +VI+GG+ S+         +  +      +   +   L     
Sbjct: 258 TVESSAFDIFRSFMILFMVIVGGLGSVLGSFLGAFFIFLLPIALNNVVTTF--GLPIATE 315

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
           + +          +   +++  H L RL
Sbjct: 316 TISHIEFMAFGGLIVFFLIVEPHGLARL 343


>gi|331696418|ref|YP_004332657.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326951107|gb|AEA24804.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 373

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 66/324 (20%), Positives = 127/324 (39%), Gaps = 33/324 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V    L+ LF     +  Y+  +    L+Y +   G +++VG  G + L     +A+GA
Sbjct: 43  IVAIVALVVLFAVPFVANSYLVFVLSLTLVYAISTVGFNLLVGWSGQIGLAHAALFALGA 102

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y   I          + IP++ + +    +I+G P+++ +G +LAIATL +      +L+
Sbjct: 103 YGSAISVQHGVP-FLITIPLAGVAAALLAVIIGFPAVRLKGFFLAIATLALGMAIVELLV 161

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
             +PIT G AG+                     +    +      Y+V+L +  L+  + 
Sbjct: 162 FARPITGGGAGMN-----------------VDVWTLPGITGSASTYFVILVVAALTFFLT 204

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
                       + +RD      SL  +++  +L AF +S     +AG  ++  +  I P
Sbjct: 205 RRALLGRFGRTLQAVRDLGPLTGSLGVSVLRYRLVAFGLSGFIAAVAGTLYSQLQTFIFP 264

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            MF  +  + ++ +V +GG  SL       A  + ++E    +                 
Sbjct: 265 AMFHMNLLVPMLVMVFVGGAGSLWGPLVGAAFAVVIIEFFQDL---------------GD 309

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
           +      + L +VI +    L  L
Sbjct: 310 QQAIAYGLVLMVVIALLPGGLTSL 333


>gi|256845864|ref|ZP_05551322.1| branched chain amino acid ABC transporter permease [Fusobacterium
           sp. 3_1_36A2]
 gi|256719423|gb|EEU32978.1| branched chain amino acid ABC transporter permease [Fusobacterium
           sp. 3_1_36A2]
          Length = 324

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 73/335 (21%), Positives = 138/335 (41%), Gaps = 45/335 (13%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L +V   +LF  + +    +Y   + I ILI V+    L++ VG LG ++L      +I
Sbjct: 14  VLLIVLYFILFSLINSGFISRYQVGILILILINVILVASLNVTVGCLGQITLGHAGFMSI 73

Query: 77  GAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           GAY+  +L             + + +  +++G  G I+G+P+L+  GDYLAI TL   EI
Sbjct: 74  GAYTAALLTKSGFLSGYPGYIVALIIGGLVAGLIGFIIGIPALRLTGDYLAIITLAFGEI 133

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            + +LI++   T G  G+    R+                             ++  +  
Sbjct: 134 IR-VLIEYFKFTGGAQGLTGIPRVNNFT-------------------------LIYFITI 167

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            S   +  +  +    A   IR+++ A  +      + K  AF +S+ F G+AG  +A +
Sbjct: 168 FSVIFMYSIMTSRHGRAVLAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGGIYAHN 227

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              +    F ++ +I ++ +V+LGGM S +    +  +L  + E+      Y        
Sbjct: 228 LGILGAKQFDYNYSINILVMVVLGGMGSFTGSILSAIVLTILPEVLRSFAEY-------- 279

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                     +  + L +++L R   LL       
Sbjct: 280 -------RMIVYPLILIIMMLFRPKGLLGREEFQI 307


>gi|254452766|ref|ZP_05066203.1| permease protein, haat family [Octadecabacter antarcticus 238]
 gi|198267172|gb|EDY91442.1| permease protein, haat family [Octadecabacter antarcticus 238]
          Length = 380

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 68/340 (20%), Positives = 129/340 (37%), Gaps = 32/340 (9%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------YG 89
           Y  S+     IY +FA GL++  G  GL ++  V   A+GAY+Y +L +         +G
Sbjct: 24  YFLSLLTVGGIYSIFALGLNVNWGFAGLFNVGIVGFAAVGAYTYALLTTAESTYHIGGFG 83

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L +   +  + M S      +GL  ++ R DYLAIAT+ ++EI + IL     ITNG  G
Sbjct: 84  LPLPFGMFAAMMTSAVIAGFIGLICIRLRADYLAIATIGIAEIIKLILKNETEITNGPRG 143

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSF-------------VIYEIFMYYVLLGMCFLSAS 196
           I    R +   +  R    +                      ++      +L + ++   
Sbjct: 144 INKIPRAWEHFSEERFYTSWPMSWFGTLENWEAFFDTLPNWYWQPLFAGTILLVMYVIYR 203

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++   R +        IR+N+ A  +    +   ++ AF + +A +G+AG+ FA     I
Sbjct: 204 MLERARTSPWGRMMTAIRENEPAARAAGKDVTRRRIEAFIIGAAIMGLAGSLFAQHLRLI 263

Query: 257 SPDMFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            P           +V  ++I+GG  +         ++  +            + +     
Sbjct: 264 EPTNTFDPSKVTFLVWVMLIVGGSGNNRGAMLGAFLIWTLWSASELFITGAIDLIGNIFS 323

Query: 315 SF---------NMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           +                L+ I + +++      +L    P
Sbjct: 324 TLDPSILQTRAGFLRMMLIGILMQVILQRYPGGILPEVRP 363


>gi|149194943|ref|ZP_01872036.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Caminibacter mediatlanticus TB-2]
 gi|149134864|gb|EDM23347.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Caminibacter mediatlanticus TB-2]
          Length = 352

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 75/357 (21%), Positives = 136/357 (38%), Gaps = 47/357 (13%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L   +    +  V    L FL+        Y  ++   I I+++ A   +++ G  G  S
Sbjct: 11  LTPKEYFSLIAIVTALFLAFLYFSPKIFSDYTLTVLGNIYIFIILAISYNLINGVTGQFS 70

Query: 68  LNCVIAYAIGAYSYVILGSR--------------------YGLSIWLLIPVSAMISGACG 107
           L      AIGAY   IL                       Y    +L + +S +++    
Sbjct: 71  LEPNGFVAIGAYVTAILMLSPELKSEIYMLTNPLPFIKEAYIPIPFLALIISGVVASLVA 130

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           + +  P  + RGDYLAI TL    I +  LI    ++NG  G+                 
Sbjct: 131 LTLAFPVFRVRGDYLAIVTLGFGFIIRIFLINTPSVSNGSMGLDSIP------------- 177

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                           Y+++  +  +S  ++  +  +    A +++RD++ A  ++    
Sbjct: 178 ------------GFASYFLIGVVALISIILVYNIVYSRYGRAMKSVRDDEDAALAMGINT 225

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
              K  AF  S+ F G+ G   A+S   ISPD F F     ++ I++LGG+ S+S    A
Sbjct: 226 FKIKTMAFMTSAFFEGVGGGLLASSIGSISPDQFTFMLTFQLLIIIVLGGLGSMSGAIFA 285

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           T + IG +E+   ++   +   L            +  + L L++L     +   + 
Sbjct: 286 TFLFIGGMEILRPLDDASWQ--LGPIHGIPGLRMVVFSLILLLLMLFARRGIFGDKE 340


>gi|317154667|ref|YP_004122715.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2]
 gi|316944918|gb|ADU63969.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2]
          Length = 356

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 53/341 (15%), Positives = 117/341 (34%), Gaps = 6/341 (1%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            +     LL+           YI ++ + + I ++ +  L++V G++G  S        +
Sbjct: 8   FVLAASCLLMLAMAQYGLIDNYIQAVFMFVGINIIMSTSLNLVNGNMGEFSCGHAAFMCV 67

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY   +L       +     + A ++     ++             I  L   +   + 
Sbjct: 68  GAYVSSVLSVLCFGKLLGGPLLPASMAVFVFPLIIFIGGAVAALAGIIVALPSFKTRGDY 127

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           L       N      + +     G+     ++   +         +M   ++     +  
Sbjct: 128 LAIITIAVNYMIISAIENMPSIGGSRGFQGMKDTVWAMVDTFNGPWMLLWVILFTVFTVW 187

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           II     +        I  ++ A   ++      KL  F +SS   G+AG  FA     +
Sbjct: 188 IIRRFISSTYGKGVNAICQDEIAAEIMSVNTDRMKLVTFMLSSGLAGIAGGLFAHIVGYV 247

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG------MNFYYFNSLL 310
           +P  F   ++   + +V LGGM SLS    +  +  G++E+         +         
Sbjct: 248 NPQSFNILKSTEAMVMVYLGGMGSLSGAVLSAILFTGLMEVLRSQSLIEFILSPVTFVFP 307

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            ++ S  +    L+ + L L++  R   ++  +  S+   +
Sbjct: 308 DWEPSAGVIKWVLIPLILVLLMQFRPEGIMGNKELSDVFPK 348


>gi|92113544|ref|YP_573472.1| inner-membrane translocator [Chromohalobacter salexigens DSM 3043]
 gi|91796634|gb|ABE58773.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 314

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 62/324 (19%), Positives = 128/324 (39%), Gaps = 27/324 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------Y 88
            Y+ S      +Y + A GL++  G  G  ++     +A+GAY+  IL +         +
Sbjct: 8   SYLISFLTFAGVYAVLALGLNMQWGFTGQFNIGIAGFFAVGAYTSAILTTPSSPAYLGGF 67

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           G+   + +  + + S   G+++GL + + R DYLAIA++ ++E+ +  +     +TNG  
Sbjct: 68  GMPFLVGLAGAVIASTLLGLVVGLITARLRTDYLAIASIGIAEMVRLFVKNEDWLTNGVR 127

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           GI   +R                F  + +   +    ++         ++     +    
Sbjct: 128 GIAGIERP---------------FADTVLDSPLTYLVIVALFVAGVYFLVERAYASPWGR 172

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE-NI 267
             R IR+N+ A  +   +I   +L AF + SA +G+ G  +A     +SP+ F       
Sbjct: 173 VLRAIRENEPATAAAGKSIAGFRLQAFVLGSAIMGLGGGLYAHFFGFLSPEAFMPLYGTF 232

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +V  ++I GG  +         ++ GV      +                     L+ + 
Sbjct: 233 LVWVMLIAGGSGNNRGAILGAVLVWGVWSGTELLTGLLPAEH---ATQGAALRVLLIGVL 289

Query: 328 LFLVILMRSHSLLRLRTPSNFLER 351
           L ++++ R   +L  + P     +
Sbjct: 290 LQVILVTRPEGVLPEKPPRLIARK 313


>gi|83747455|ref|ZP_00944494.1| LivM [Ralstonia solanacearum UW551]
 gi|207739603|ref|YP_002257996.1| transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83725912|gb|EAP73051.1| LivM [Ralstonia solanacearum UW551]
 gi|206592983|emb|CAQ59889.1| transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 322

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 57/325 (17%), Positives = 123/325 (37%), Gaps = 24/325 (7%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
               +L L            ++G ++L+  + A  ++ ++G  G+LS      + +GAY 
Sbjct: 18  ALWAVLLLAPYWMPLLGGYTALGTRVLVLGLAAMSVNFLLGFTGVLSFGHAAYFGLGAYG 77

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                     S  L +    ++ G  G ++G  S++ RG Y A+ T+   ++F  I  +W
Sbjct: 78  AGFALKFLAPSTPLALVCGTLLGGIAGALLGALSVRRRGVYFAMVTIAFGQVFYYIAFQW 137

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G  G+    R+          +         +      YY +L    L+  ++ +
Sbjct: 138 SSLTGGDDGLRGFSRMP---------LDLGFTTLDILSNADAFYYFVLACLALATGLMAF 188

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           + R+   +    IR+N++    L   +      AF +S  F+G AGA +A   +   P  
Sbjct: 189 VLRSPFGHTLIAIRENERRARFLGIPVNRHIWIAFTLSCFFMGFAGALYALLNNFADPRG 248

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
             +S++   + + ++GGM S         + + + +    +                +  
Sbjct: 249 LHYSQSGDFVMMAVMGGMRSFWGPLLGAVVFVVLQDYLSSL---------------TVNW 293

Query: 321 TTLMVIALFLVILMRSHSLLRLRTP 345
            + + +    ++L     LL +   
Sbjct: 294 MSFVGMLFVAIVLFFPRGLLGVLRR 318


>gi|323341215|ref|ZP_08081462.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Lactobacillus ruminis
           ATCC 25644]
 gi|323091409|gb|EFZ34034.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Lactobacillus ruminis
           ATCC 25644]
          Length = 324

 Score = 98.4 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 74/335 (22%), Positives = 140/335 (41%), Gaps = 44/335 (13%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             LL VV  +L+   +       + ++M + I I ++ A GL++V+G  G  SL      
Sbjct: 14  WLLLMVVGFVLINFLVMIGVIDSFTENMLVTIGINIILAVGLNLVIGFSGQFSLGHAGFM 73

Query: 75  AIGAYSYVILGSRYGLSI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           AIGAY+  I+      S     + + V   I+    +I+G+P  +  GDYLAIAT+  +E
Sbjct: 74  AIGAYATGIMTLGGFDSFGGWIVSVLVGMAIAAVVAIIVGIPCFRLSGDYLAIATMGAAE 133

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I + +L     ITNG AG++   +                              ++  + 
Sbjct: 134 IVRIVLNNM-KITNGPAGLFNIPQYTTWP-------------------------LVYVLT 167

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+  + +    +    A  ++RDN+ A  ++       KL+AF + +    +AG+  A+
Sbjct: 168 CLTTIVTVNFIHSRGGRAVMSVRDNEIAAEAMGINTTRWKLAAFVLGAVTAAIAGSLSAS 227

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               I+P  +   +++ ++ IV+LGGM S++    A  +L  +  +              
Sbjct: 228 YIQTIAPSNYGIMQSVSILIIVVLGGMGSMTGTFVAAVVLGILDTVLQSF---------- 277

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                 +    +  I L L+++ +   L+     S
Sbjct: 278 -----GVLRMVIYAIVLILMMVFKPSGLMGTNELS 307


>gi|296161705|ref|ZP_06844508.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295888019|gb|EFG67834.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 355

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 73/336 (21%), Positives = 136/336 (40%), Gaps = 16/336 (4%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +   +   LA V  L+ F+ +    +  +++++ I  L+  +   GL++V G  G LSL
Sbjct: 19  QQRPLLKVWLAAVLVLIAFVVVPVFGNDYWLNAILIPFLVLSLAGLGLNLVTGYAGQLSL 78

Query: 69  NCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                 ++GAY+   +L     L + + + +  +IS   G + GLPSL+ +G YL ++TL
Sbjct: 79  GSAAFMSVGAYATYNLLVRVPALPLAVDLLLGGLISAVVGALFGLPSLRIKGFYLIVSTL 138

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                 + I  +    +N      ++                       +      Y  +
Sbjct: 139 AAQFFVEWIFTRVSWFSNDDTSGVLSAPRLTAFGWK-------------IDTPAARYLFV 185

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           LG+  +   +   L R+ +   W  +RD   A   +   I   KL AFA+SS   G+AGA
Sbjct: 186 LGVTSVLFILAARLVRSELGRRWMAVRDMDTAARVIGIPIGRTKLLAFALSSFVTGIAGA 245

Query: 248 FFA-ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
            +A A    + P  F  + +  V+ I+I+GGM+S+       A ++ +  L         
Sbjct: 246 LWAFAYLGTVEPHGFDLNLSFQVLFIIIIGGMSSIGGNFLGAAFIVLLPILLSNAAGA-L 304

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            ++             L    + + ++     L RL
Sbjct: 305 ATVGIEAGQLQNLQKILFGTLIIVFLIKEPDGLARL 340


>gi|313114518|ref|ZP_07800032.1| amino acid or sugar ABC transport system, permease protein
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310623141|gb|EFQ06582.1| amino acid or sugar ABC transport system, permease protein
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 386

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 57/334 (17%), Positives = 112/334 (33%), Gaps = 23/334 (6%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
                + ++  +  IY + A  ++++ G  GL SL       +GAY+Y IL         
Sbjct: 33  FVPSMLLTVLRKGAIYALVAVSMNLLNGFTGLFSLGQAGFMLLGAYTYAILTIPAASQKS 92

Query: 94  LLIPVSAMISGA-----------CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +    +    G               ++              A          + +K   
Sbjct: 93  IYQRYANGGIGFSIPELLSKPLGGFGLLLGVVFCLILAGFIAALFAFLIGLPVLKLKSDY 152

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL-----------LGMC 191
           +     G     R   +      L         F  +  F   +                
Sbjct: 153 LAIATLGFAEIIRAAVVYEGFGPLTNGSNLLYGFTSFASFNLSLGGTTLHLETVMPFLFS 212

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +  +IIL L  +    A++ IRD++ A  ++   +   K  +F +SS F G++GA  A 
Sbjct: 213 GICIAIILLLINSTYGRAFKAIRDDEIAAEAMGINLASHKRMSFIISSFFAGISGAMLAM 272

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE-LCCGMNFYYFNSLL 310
            +  +    FK S    ++ IV++GG+ S+S    A+ + I   E L   ++   +    
Sbjct: 273 YQASVQATTFKSSMTYEILLIVVIGGIGSVSGSIIASFLFIASSEWLLRFLDNETWIGGF 332

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +     +     +  I +  V+L     ++  R 
Sbjct: 333 RVPLLRSGFRMVVFSIIIMAVVLFFRKGIMGDRE 366


>gi|259048102|ref|ZP_05738503.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Granulicatella adiacens
           ATCC 49175]
 gi|259035163|gb|EEW36418.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Granulicatella adiacens
           ATCC 49175]
          Length = 323

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 75/343 (21%), Positives = 136/343 (39%), Gaps = 43/343 (12%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R +K +    L A+    LLF+ +       Y +S  I I+I +++A GL++++G  G  
Sbjct: 6   RFHKKNIRWTLFALGMYALLFVLVQTGVINFYYESTFINIMINIIYAVGLNLILGVAGQF 65

Query: 67  SLNCVIAYAIGAYSYVI--LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           SL      AIG+YS  I          ++  + V  +IS     ++GLP+L+ +GDYLAI
Sbjct: 66  SLGHAGFIAIGSYSGAILGKMINGLPGLFAGMAVGVVISVIVAFLVGLPTLRLKGDYLAI 125

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           ATL ++EI +  +   K                                    I     +
Sbjct: 126 ATLGVAEIIRVAVTNMKITNGAA--------------------------GISGIPLTNTW 159

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            +      ++  +IL    ++   A   +  ++ A  S+   +   K+ AF + +A   +
Sbjct: 160 TITYIFLVVTTILILNYTFSSAGRATYGVLQDEIAAESMGVQVTKYKILAFVLGAATASI 219

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            G   A +   ++P  F F ++I V+ IV+ GG+ S +    A  +L  +  +       
Sbjct: 220 GGTLSATTLGAVTPGDFTFMKSIDVLIIVVFGGIGSFTGSFVAAVLLGIINLVLQ----- 274

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                      F      +  +AL L+++ R   LL       
Sbjct: 275 ----------PFGQLRMIIYAVALILIMIFRPGGLLGTWEFKL 307


>gi|144901056|emb|CAM77920.1| Ureashort-chain amide or branched-chain amino acid uptake ABC
           transporter permease protein, possibly fusion protein
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 528

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 88/297 (29%), Gaps = 16/297 (5%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL++  G +G++++       +GAY+   +   +   +   +    +++      + 
Sbjct: 247 AAIGLAVTFGVMGVINMAHGEMIMLGAYTTFAVQQLFRALLPPDLVDLYLVAAIPAAFVV 306

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
              +    +   I  L      + +L  W      +  +        +     + +    
Sbjct: 307 TALVGMGLERGVIRFL-YGRPLETMLATWGISLVLQQVVRQIFGATNMEVANPAWMTGGW 365

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
             +           ++     +   +   LR ++     R +  N+    ++        
Sbjct: 366 ELAGGFTLTYNRVIIIFFCLAVLGGLAALLRWSSFGLHMRAVTQNRPMAAAMGIPTGRVD 425

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   A S+          +  +    +V+ GG+ SL         L
Sbjct: 426 ALTFGLGSGIAGIAGV--ALSQIGNVSPNLGQAYIVDSFMVVVFGGVGSLWGTLVGAVSL 483

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             V +                          L+++ + L I  R   L  L+  S  
Sbjct: 484 GVVNKFLEPYAGAMLGK-------------ILVLVFIILFIQKRPRGLFALKGRSVE 527


>gi|293603600|ref|ZP_06686021.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, ABC protein [Achromobacter piechaudii ATCC
           43553]
 gi|292818036|gb|EFF77096.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, ABC protein [Achromobacter piechaudii ATCC
           43553]
          Length = 597

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 110/334 (32%), Gaps = 14/334 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++   L  L LG      +  ++   I +Y + A GL ++ G  GL S        +GA
Sbjct: 5   IILVAFLALLALGPLALPPFYVTLLNYIGLYALVALGLVLLTGVGGLTSFGQAAFVGVGA 64

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L +R      L   ++ + +     ++   +L     YL  A  +         +
Sbjct: 65  YTTALLTTRADT---LPSWLAWLGASPWLTLLAGLALTLLIAYLLGAITLK---LSGHFL 118

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY-EIFMYYVLLGMCFLSASI 197
               I  G +  +    +  LG               + +     +YY++     ++   
Sbjct: 119 PLGTIAWGLSLYFAFGSVEGLGGHTGIPDIPAINLFGWTLNQGGSIYYLIWAFLLVAVWS 178

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L  +    A R ++  +    S+      +++  F +++     +G  +A  +  ++
Sbjct: 179 TQNLLDSREGRAIRALKGGRVMAESMGVNTARSRMVIFIIAALQACASGWLYAHMQRFVN 238

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F     I  + + ++GG   +        +   + +               F     
Sbjct: 239 PNPFGLQMGIEYLFMTVIGGAGQVWGALVGAGVFTVLKQWLQDWLPKLLGQTGNF----- 293

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                +    + L++      L  + T    +++
Sbjct: 294 --EVIVFGFGMVLLLHRARSGLWPVLTRWIRVKK 325


>gi|329924203|ref|ZP_08279390.1| urea ABC transporter, permease protein UrtC [Paenibacillus sp.
           HGF5]
 gi|328940813|gb|EGG37126.1| urea ABC transporter, permease protein UrtC [Paenibacillus sp.
           HGF5]
          Length = 362

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/333 (14%), Positives = 94/333 (28%), Gaps = 27/333 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            +LL + L    +  +   +  + L   + A GL ++ G  G+LSL   + + +GAY+  
Sbjct: 21  AVLLLMCLAPLFTTPFRLGLLTKFLALAILAVGLDLIWGYGGILSLGHGVFFGLGAYAMA 80

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLP-------------SLKFRGDYLAIATLIM 129
           +          L   +      +                                     
Sbjct: 81  MYLKLDASGSALPDFMGWSGVASLPWFWEPFRSFPAALILGMLLPALLALILGFFTFRNR 140

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                  ++    +                   +        F  +    +I +Y++ L 
Sbjct: 141 IVGVYFTILTQALVMIVVTLFVGKQEWTGGTNGITGYSSVLGFNLNAPSTKIGLYFITLA 200

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
               +  +   +  + +       RD +     L       K  AFAVS    G+AG  F
Sbjct: 201 ALAGAYILCRRIVNSRVGQVLEASRDGENRVRFLGFDPSRYKTFAFAVSGGLAGLAGMLF 260

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                 ISP M     +I ++  V LGG  +L        +L                + 
Sbjct: 261 VLQVGIISPSMMGIVPSIEMVLWVALGGRGTLIGAIIGAVLL--------------NAAK 306

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                ++      ++     +V+++    L  L
Sbjct: 307 TGISEAYPEGWLLVLGALFVIVVVLMPRGLTGL 339


>gi|312796327|ref|YP_004029249.1| branched-chain amino acid transport system permease protein livM
           [Burkholderia rhizoxinica HKI 454]
 gi|312168102|emb|CBW75105.1| Branched-chain amino acid transport system permease protein livM
           [Burkholderia rhizoxinica HKI 454]
          Length = 362

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 121/324 (37%), Gaps = 30/324 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++  L+          Q ++ ++  +I I  + A  L +++G  GL+S    + + +GA
Sbjct: 50  LIMAALIAVPLYAQATQQPFLLTLVTRIAILAIAAMSLDLILGVGGLVSFGHALFFGLGA 109

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L      S WL +  +  +S    ++ G  +L+ RG    + TL  +++F    +
Sbjct: 110 YATGMLAQHGVSSGWLHLLCAVAVSVLVAVVTGAIALRTRGIAFIMITLAFAQMFYFFAV 169

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
             +                       +L    +F +  +   + +Y V   +     +  
Sbjct: 170 GLREYGG---------------DDGFALAAGSQFGAVQLTDPLTLYVVSACLLMALLAFG 214

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
                TA+      IR N++   +L       K +A+ V++    +AG  FA     ++P
Sbjct: 215 RHFLHTAMGMTLGGIRINERRMQALGIPTTRCKRAAYVVAAVLSSVAGMLFANLTQFVAP 274

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
               ++ +  +I +V++GG  +          ++   E    M  ++             
Sbjct: 275 SYLSWTMSGDLIVMVVIGGAGTFIGAVLGAFAIVLAEEGLKAMTEHW------------- 321

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
               +M   + + +L+  H L  L
Sbjct: 322 --MLVMGPLIVVAVLVNRHGLAGL 343


>gi|126730461|ref|ZP_01746272.1| branched-chain amino acid ABC transporter, permease protein
           [Sagittula stellata E-37]
 gi|126709194|gb|EBA08249.1| branched-chain amino acid ABC transporter, permease protein
           [Sagittula stellata E-37]
          Length = 358

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 79/331 (23%), Positives = 144/331 (43%), Gaps = 13/331 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +L  V  L  ++    T S+    ++ I +LIY + A GL+I+ G  G LSL       
Sbjct: 26  AILLGVILLCAWVIFPLTASEFAFQTLLIPVLIYSLAALGLNILTGYAGQLSLGTAAFMG 85

Query: 76  IGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           +GAY+   ++     ++  + I +S + S   G+  G+PSL+ +G YLAIATL       
Sbjct: 86  VGAYACYKLITLMPWMNPIVAILLSGVFSAGVGVAFGIPSLRIKGFYLAIATLAAQFFLV 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  KW  + N                 V +L  F  + +      I  YYV+L +  L 
Sbjct: 146 WLFEKWAWLYNYN---------ASGAIQVPNLEMFGVYVAGPQASSIVQYYVVLFIVCLL 196

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASR 253
             + + L R  +   W+  RD   A   +   ++ +KL+AFA+SS  +G+AGA F    R
Sbjct: 197 TMLCINLTRGTLGRTWKATRDMDIAAELIGINLMRSKLTAFAISSYIVGVAGALFVFMWR 256

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
               P++F    +  ++ I I+GG+ S+        +++G+  +   +       +    
Sbjct: 257 GAAEPNLFDIPLSFRILFIAIIGGLGSIMGNYLGAILIVGLPVVLNLLPNAL--GISIDS 314

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                 +  ++   +   +++  H L +L  
Sbjct: 315 ALVEHLNIMIVGSLIVFFLIVEPHGLAQLWR 345


>gi|145589383|ref|YP_001155980.1| inner-membrane translocator [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047789|gb|ABP34416.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 527

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/310 (10%), Positives = 83/310 (26%), Gaps = 17/310 (5%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
            + +      + ++ A GL+I  G +G++++       +GAY+  ++   +       + 
Sbjct: 234 NVIAGLSYGSVLLLCALGLAITYGLIGVINMAHGEFLMVGAYATYVVQGFFRQYAPGYLD 293

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
              + +     +              +   +     + +L  +                 
Sbjct: 294 WYLLFALPVAFLSAALVGILIER--TVIKFLYGRPLETLLATFGVSLLMIQMTRTIFGAQ 351

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +       +         ++       +      +     L L +T +    R +  N+
Sbjct: 352 NVEVANPIWMSGAMQVLPNLVVPYNRIIIFAFAIAVVIVTWLVLNKTRLGLFVRAVTQNR 411

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                +    +   + AFA  +   G+ G   A S+          S  +    +V+LGG
Sbjct: 412 TMAACVGVKTVRVDMYAFAFGAGIAGLGGV--ALSQIGNVGPDLGQSYIVDSFMVVVLGG 469

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           +  L+        L    +L           +                         R  
Sbjct: 470 VGQLAGTIYGAFGLGITSKLLEPFIGAVLAKIAILIFIIIFIQR-------------RPQ 516

Query: 338 SLLRLRTPSN 347
            L  L+  S 
Sbjct: 517 GLFALKGRSV 526


>gi|120609478|ref|YP_969156.1| inner-membrane translocator [Acidovorax citrulli AAC00-1]
 gi|120587942|gb|ABM31382.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 354

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 75/344 (21%), Positives = 140/344 (40%), Gaps = 23/344 (6%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           +++F +  +++  +  L      +          S  +  ++ +  LI  + A GL+I+V
Sbjct: 17  LALFPVAQDRWALLALLAVAFVGV------PLVGSDYFFRAIAVPFLILSLAAIGLNILV 70

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG-MIMGLPSLKFRG 119
           G  G +SL      A+GAY+   L  R      LL  +   +      ++ G+PSL+ RG
Sbjct: 71  GYCGQISLGTGAFMAVGAYAAYNLQVRIDGMPLLLALLGGGLCATVFGVLFGIPSLRIRG 130

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
            YLA+ATL           + K +TN               ++    +   +     +  
Sbjct: 131 LYLAVATLAAQFFTDWFTNRVKWVTN-------------DSSSGSVSVGHLQILGLGIET 177

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
            +  Y + LG   + A +   L R A+   W  +RD   A   +    ++AKLSAFAVSS
Sbjct: 178 PVQKYLLCLGFVAVFALLAKNLVRGAVGREWMAMRDMDVAAAVIGIRPVYAKLSAFAVSS 237

Query: 240 AFIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
             +G+AG  +         P  F    +  ++ +VI+GG+ S++      A ++ +  L 
Sbjct: 238 FIVGVAGGLWGFVHLGSWEPAAFGIDRSFQLLFMVIIGGLGSIAGSFFGAAFIVLLPLLL 297

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             +   ++  L     +       +    +   +++  H L RL
Sbjct: 298 NYV--PHWLGLPLSTGTATHLEHMIFGALIVFFLIVEPHGLARL 339


>gi|299069701|emb|CBJ40977.1| putative ABC-type branched-chain amino acid transport system,
           permease component [Ralstonia solanacearum CMR15]
          Length = 322

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 55/307 (17%), Positives = 120/307 (39%), Gaps = 24/307 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             ++G ++L+  + A  ++ ++G  G+LS      + +GAY           S  L +  
Sbjct: 36  YTALGTRVLVLGLAAMSVNFLLGFTGVLSFGHAAYFGLGAYGAGFALKFLAPSTPLALVC 95

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ G  G ++G  S++ RG Y A+ T+   ++F  I  +W  +T G  G+    R+  
Sbjct: 96  GTLLGGVAGALLGALSVRRRGVYFAMVTIAFGQVFYYIAFQWSALTGGDDGLRGFSRMP- 154

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +         +      YY +L    L+  ++ ++ R+   +    IR+N++
Sbjct: 155 --------LDLGFTTLDILSNADAFYYFVLACLALATGLMAFILRSPFGHTLIAIRENER 206

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +      AF +S  F+G AGA +A   +   P    +S++   + + ++GGM
Sbjct: 207 RARFLGIPVNRHLWIAFTLSCFFMGFAGALYALLNNFADPRGLHYSQSGDFVMMAVMGGM 266

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         + + + +    +                +   + + +    ++L     
Sbjct: 267 RSFWGPLLGAVVFVVLQDYLSSL---------------TVNWMSFVGMLFVAIVLFFPRG 311

Query: 339 LLRLRTP 345
           LL +   
Sbjct: 312 LLGVLRR 318


>gi|192292556|ref|YP_001993161.1| urea ABC transporter permease [Rhodopseudomonas palustris TIE-1]
 gi|192286305|gb|ACF02686.1| urea ABC transporter, permease protein UrtB [Rhodopseudomonas
           palustris TIE-1]
          Length = 537

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 90/297 (30%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++          L   S +I+     ++ 
Sbjct: 258 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQEAIRTRYPALFDYSLLIAVPLAFLVA 317

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       +   +     + +L  W      +  +              S      
Sbjct: 318 GAVGVLIER--TVIRFLYGRPLETLLATWGLSLILQQAVRTLFGPTNREVGNPSW-MSGA 374

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++L     + A ++  LR T++    R +  N++   S+        
Sbjct: 375 FELGEMTITYNRLWILCFTLAVFALLLAMLRYTSLGLEMRAVTQNRRMAASMGIATSRVD 434

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   A S+          S  I    +V+ GG+ +L         L
Sbjct: 435 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFSL 492

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +    +                      +++ + L I  R   L  L+  +  
Sbjct: 493 GIANKFLEPVAGAVLGK-------------IAILVLIILFIQKRPRGLFALKGRAVE 536


>gi|209546082|ref|YP_002277972.1| ABC transporter [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209538939|gb|ACI58872.1| ABC transporter related [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 585

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/343 (13%), Positives = 105/343 (30%), Gaps = 29/343 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R  +  +++ LLA+    LL +  G     ++  ++  + +IY M A  + ++ G  G+
Sbjct: 1   MRDRQKLRLVLLLALALAALLLIVFGPMFLGRFSLNVLTRSMIYAMLAITVDLLWGYTGV 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           L+      + +GAY+  ++ +  G S  L +           ++                
Sbjct: 61  LTFGQAAFFGVGAYATAMVLTHIGASPALFVVALVAAVLVPLVLGLAVGWLSFYHGSTPL 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
              +  +   I++     + G                            +  +     + 
Sbjct: 121 YATVISLVVPIVVTQLVFSGGT---------------WTGSSSGLVGYDTLPLGLPGYFR 165

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +        A + +   R+        IRDN+     L       K+    V +   G+A
Sbjct: 166 LSGACLLALAIVAIVFVRSDAGRLLVAIRDNEARVAYLGMNPARLKIVLTGVLAGVCGLA 225

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  +A +   ++P+   F     ++    LGG  ++         +  +     G     
Sbjct: 226 GFLYANASGVVAPENTGFVFGTELVVWTALGGRGTIIGPMFGAIGIDYLSASLSG----- 280

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                            ++     ++I++    L  L T    
Sbjct: 281 ---------DLPFLWQLIVGALFVVMIILLPGGLASLVTRFLK 314


>gi|115525738|ref|YP_782649.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115519685|gb|ABJ07669.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 564

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 89/297 (29%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       IGAY   ++      S   L   S +++     +  
Sbjct: 285 AAIGLAITFGVMGVINMAHGEMVMIGAYVTFVVQETIRTSYPGLFDYSLLMAVPLAFLTA 344

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                      +I   +     + +L  W      +  +              S      
Sbjct: 345 GLIGVLIER--SIIRFLYGRPLETLLATWGLSLILQQAVRTLFGPTNREVGNPSW-MSGA 401

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++L     +   ++  LR TA+    R +  N++   S+        
Sbjct: 402 FELGQLTITYNRLWILCFTLAVFVILLAMLRYTALGLEMRAVTQNRRMAASMGIATSRVD 461

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   A S+          S  I    +V+ GG+ +L         L
Sbjct: 462 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFSL 519

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +    M                      +++ + L I  R   L  L+  +  
Sbjct: 520 GIANKFLEPMAGAVLAK-------------IAILVLIILFIQKRPRGLFALKGRAVE 563


>gi|207724971|ref|YP_002255368.1| transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206590198|emb|CAQ37159.1| transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 322

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 123/325 (37%), Gaps = 24/325 (7%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
               +L +            ++G ++L+  + A  ++ ++G  G+LS      + +GAY 
Sbjct: 18  ALWAVLLVAPYWMPLLGGYTALGTRVLVLGLAAMSVNFLLGFTGVLSFGHAAYFGLGAYG 77

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                     S  L +    ++ G  G ++G  S++ RG Y A+ T+   ++F  I  +W
Sbjct: 78  AGFALKFLAPSTPLALVCGTLLGGIAGALLGALSVRRRGVYFAMVTIAFGQVFYYIAFQW 137

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G  G+    R+          +         +      YY +L    L+  ++ +
Sbjct: 138 SSLTGGDDGLRGFSRMP---------LDLGFTTLDILSNADAFYYFVLACLALATGLMAF 188

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           + R+   +    IR+N++    L   +      AF +S  F+G AGA +A   +   P  
Sbjct: 189 VLRSPFGHTLIAIRENERRARFLGIPVNRHIWIAFTLSCFFMGFAGALYALLNNFADPRG 248

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
             +S++   + + ++GGM S         + + + +    +                +  
Sbjct: 249 LHYSQSGDFVMMAVMGGMRSFWGPLLGAVVFVVLQDYLSSL---------------TVNW 293

Query: 321 TTLMVIALFLVILMRSHSLLRLRTP 345
            + + +    ++L     LL +   
Sbjct: 294 MSFVGMLFVAIVLFFPRGLLGVLRR 318


>gi|163857891|ref|YP_001632189.1| branched-chain amino acid transport system, permease component
           [Bordetella petrii DSM 12804]
 gi|163261619|emb|CAP43921.1| branched-chain amino acid transport system, permease component
           [Bordetella petrii]
          Length = 350

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 59/306 (19%), Positives = 117/306 (38%), Gaps = 18/306 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y   + ++++IY +FA  L ++VG  GL+SL     + IGAY+  +L      +    +
Sbjct: 25  DYYTGLAVKLMIYAIFALSLQLLVGGAGLVSLGHAAYFGIGAYAAALLSPESEAAGLAWL 84

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +A++  A   ++             I   +        +     +  G  GIY+  R 
Sbjct: 85  LGAAVLGAAAYALVTGALALRTRGVYFIMVTLAFSQMAYYVFHDTDLGGGSDGIYLYFRP 144

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     +    +    +      Y  +L    L+   +  L R+    A   IR N
Sbjct: 145 ---------QLSLGGWQPFDLDQPGVYYLFVLACLALTWGFLAMLARSPFGAALAGIRIN 195

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +   +    KL+A+ V +A  G+AG  +A     ++P++  + ++ +V+ +VILG
Sbjct: 196 EQRMRAAGYSTFPYKLAAYVVGAALAGLAGFLYALKDGFVTPELLAWEQSGLVLLMVILG 255

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM  L       A LI + EL                  +       + +++  ++ +  
Sbjct: 256 GMGRLGGAVLGAAALILLQELFQS---------QAIFGDYAQHWHLPLGLSIIALVALLP 306

Query: 337 HSLLRL 342
             L  L
Sbjct: 307 DGLAGL 312


>gi|288921964|ref|ZP_06416174.1| inner-membrane translocator [Frankia sp. EUN1f]
 gi|288346674|gb|EFC80993.1| inner-membrane translocator [Frankia sp. EUN1f]
          Length = 371

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 59/315 (18%), Positives = 121/315 (38%), Gaps = 16/315 (5%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
             +S  Y +     +  + +   GL+++ G  G +SL     + IGAY+  I        
Sbjct: 30  PQQSTPYDNLQITLVAAWAVVIAGLNLLTGYAGQISLGQAAFFGIGAYTTAITALHGWP- 88

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + L   ++ ++    G ++ +P+++ RG  LA+ T+ +  +   +  +   +T G  G+ 
Sbjct: 89  VVLSFALAFLLPATVGALVAIPAVRLRGHALAMITISLPLVAVPLAKRLDGLTGGSQGLT 148

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                  S +  + + YYV+L +     ++     R     A  
Sbjct: 149 TPIGSAPTW--------------SGLADDQWAYYVVLTVAAALLALAHVAVRGRTGRALS 194

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            IR ++ A  +    +   K+  FA++S + G  G  +      +SP+   F   I ++ 
Sbjct: 195 LIRTSEVAAVTTGIPVRRYKMVVFALASGYGGAGGFLYVYCVRFVSPESLDFLLGITLLC 254

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
            +++GG+ S +    A    + V  L   +N    +SL+       +       IA    
Sbjct: 255 SLVVGGLRSSAGSVVAACFYVYVPNLVGDINPEK-SSLIYGAVLLLVLLFAPAGIAGAAR 313

Query: 332 ILMRSHSLLRLRTPS 346
            L R   LL  +  +
Sbjct: 314 GLWRRRKLLARKLAT 328


>gi|332710880|ref|ZP_08430817.1| urea ABC transporter membrane protein [Lyngbya majuscula 3L]
 gi|332350433|gb|EGJ30036.1| urea ABC transporter membrane protein [Lyngbya majuscula 3L]
          Length = 388

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 52/352 (14%), Positives = 105/352 (29%), Gaps = 34/352 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  +   I+ ++A+V   L+F  L       +   +  + L   + A G+ ++ G  GLL
Sbjct: 12  KQRRRKLIIEIVAIVAIALVFALLMPVILPDFRLKLLGRFLSLSIVAIGIDLIWGYTGLL 71

Query: 67  SLNCVIAYAIGAYSYVIL-----------------GSRYGLSIWLLIPVSAMISGACGMI 109
           SL   I +A+G Y++ +                  G +     W           A  +I
Sbjct: 72  SLGHGIFFALGGYAFAMHLKLQLPEGEIPEFFTLYGVKELPFFWQPFYSFPFTLIAIVLI 131

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
             + +              +                      + +    L          
Sbjct: 132 PSIVAGLLGYLVFRNRIKGVYFSILTQAALLVLFNFFNGQQKLINGTNGLK---TDTETL 188

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
           F    S    ++  Y + +    L   +  WL           IRD++            
Sbjct: 189 FGMLVSSKQAQLAFYEISILCVVLIYLLCRWLTSGRFGRLLIAIRDDENRVRFSGYDPTG 248

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            K+  FAVS    G+AGA +      ++P   + + +I ++  V +GG  +L      T 
Sbjct: 249 FKVLVFAVSGGIAGVAGALYTVQSGIVTPSYMEVAFSIEMVIWVAVGGRGTLIGAILGTL 308

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           ++     L                  F             +V+ +  + ++ 
Sbjct: 309 LVRLGQTLLSE--------------QFPEVWLFFQGALFLIVVTVLPNGIVG 346


>gi|218531732|ref|YP_002422548.1| inner-membrane translocator [Methylobacterium chloromethanicum CM4]
 gi|218524035|gb|ACK84620.1| inner-membrane translocator [Methylobacterium chloromethanicum CM4]
          Length = 347

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 67/315 (21%), Positives = 127/315 (40%), Gaps = 16/315 (5%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRY 88
           +  T +  + +++ I  LI  +   GL++ +G  G  SL      A+GAY+   +L    
Sbjct: 38  IPLTATDYWYNAILIPFLIMALAGLGLNLTMGYAGQASLGTGAFMAVGAYATYNLLLRLP 97

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            L + + +    +I+GA G+++GLPSL+ +G YL   TL    + + +  +    +N  +
Sbjct: 98  ELPLPVSLAGGGLIAGAVGLVVGLPSLRIKGFYLIAPTLAAQFLIEWVFNQVGWFSNYAS 157

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
              ++                       +      Y + L    +   +   L  +    
Sbjct: 158 SSAISTPRLVFLGY-------------DLSSPAGRYALTLTSVIVVTVLAWRLVGSQTGR 204

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSENI 267
            WR +RD + A   +   +  AKLSAF V +A  G+AGA +A A    +    F    + 
Sbjct: 205 NWRAVRDGETAAAVIGVPVARAKLSAFFVGAAVSGVAGALWAFAYLGTVDARSFDLDRSF 264

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             + I+I+GG++SLS      A ++    L   ++  +    L      +     L    
Sbjct: 265 QAMFIIIIGGLSSLSGSFIGAAFIVLTPILLTHLSNAFLGGSLD-GGQLSNLQRILFGAL 323

Query: 328 LFLVILMRSHSLLRL 342
           +   ++   + L  L
Sbjct: 324 IIGFLIKEPNGLAAL 338


>gi|317405905|gb|EFV86187.1| branched-chain amino acid transport system [Achromobacter
           xylosoxidans C54]
          Length = 314

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 73/311 (23%), Positives = 135/311 (43%), Gaps = 20/311 (6%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-SRYGLS 91
                Y   + ++I+IY +FA  L ++VG  GL+SL     + IGAY+  +L  S    S
Sbjct: 20  WSGSDYYTGLAVKIMIYAVFALSLQLLVGGAGLVSLGHAAFFGIGAYAAALLSPSSEAAS 79

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           +W L+P + + + A   + G  +L+ RG Y  + TL  +++   +      +  G  GIY
Sbjct: 80  LWWLLPAALLAAAAYAALTGALALRTRGVYFIMVTLAFAQMAYYVFHD-TKVGGGSDGIY 138

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           +  R                +    +      Y+ +L    L+   +  LRR+    A  
Sbjct: 139 LYFRP---------RAEIGGWLPFDLDQGNAYYFFVLACLALTWGFLALLRRSPFGAALA 189

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            IR N++   +   +    KL+A+ + +A  G+AG  FA     ++P++  + ++ +V+ 
Sbjct: 190 GIRINEQRMRAAGYSTYPYKLAAYVIGAALAGLAGFLFALKDGFVTPELLAWEQSGLVLL 249

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +VILGGM SL      TA L+ + EL      +           +       + +A+  +
Sbjct: 250 MVILGGMGSLGGAVLGTATLVLLQELFQSQALFG---------DYARHWHLPLGLAIIAL 300

Query: 332 ILMRSHSLLRL 342
           + +    L  L
Sbjct: 301 VALLPDGLAGL 311


>gi|33603543|ref|NP_891103.1| putative branched-chain amino acid transport system permease
           protein [Bordetella bronchiseptica RB50]
 gi|33577667|emb|CAE34932.1| putative branched-chain amino acid transport system permease
           protein [Bordetella bronchiseptica RB50]
          Length = 309

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 61/284 (21%), Positives = 118/284 (41%), Gaps = 16/284 (5%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
               L+ + L A  +  +I  +G++   Y +   GL++  G  G +SL     + + AY 
Sbjct: 9   ALCALVLIALPALLNDPFITHLGVRAATYAIVVMGLTLFAGYTGQISLGHAAFFGLAAYL 68

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             ++       + + +PV+    G  G ++G+  L+  G YLA+A++ ++ I Q I+   
Sbjct: 69  SGMMAKAGVPYL-VSVPVATAAVGVLGCLVGMLVLRTSGHYLALASIAVAVIVQVIIKNS 127

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             IT G +G+       F G ++ S               +  YY +L   F    I+  
Sbjct: 128 T-ITGGPSGLTAVPAPDFFGWSLTSD--------------LGYYYYVLLCMFAGFVILRR 172

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +  +   +A + I +N+ A  SL   +   K+ +F +S+ F   AG  F      I PD 
Sbjct: 173 VIDSRTGDALQAIANNELAAQSLGIPVFRYKVLSFTISTLFAAFAGTLFVHYDGFIDPDR 232

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
                +++ + +  +GG+ ++         L  + E       Y
Sbjct: 233 LGIHVSVLFLIMTFVGGIGNIYGSVIGAFALTIIEEYAQEFGQY 276


>gi|326315518|ref|YP_004233190.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323372354|gb|ADX44623.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 354

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 75/344 (21%), Positives = 140/344 (40%), Gaps = 23/344 (6%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           +++F +  +++  +  L      +          S  +  ++ +  LI  + A GL+I+V
Sbjct: 17  LALFPIAQDRWALLALLAVAFVGV------PLVGSDYFFRAVAVPFLILSLAAIGLNILV 70

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG-MIMGLPSLKFRG 119
           G  G +SL      A+GAY+   L  R      LL  +   +      ++ G+PSL+ RG
Sbjct: 71  GYCGQISLGTGAFMAVGAYAAYNLQVRIEGMPLLLALLGGGLCATVFGVLFGIPSLRIRG 130

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
            YLA+ATL           + K +TN               ++    +   +     +  
Sbjct: 131 LYLAVATLAAQFFTDWFTNRVKWVTN-------------DSSSGSVSVGHLQILGFGIET 177

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
            +  Y + LG   + A +   L R A+   W  +RD   A   +    ++AKLSAFAVSS
Sbjct: 178 PVQKYLLCLGFVAVFALLAKNLVRGAVGREWMAMRDMDVAAAVIGIRPVYAKLSAFAVSS 237

Query: 240 AFIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
             +G+AG  +         P  F    +  ++ +VI+GG+ S++      A ++ +  L 
Sbjct: 238 FIVGVAGGLWGFVHLGSWEPAAFGIDRSFQLLFMVIIGGLGSIAGSFFGAAFIVLLPLLL 297

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             +   ++  L     +       +    +   +++  H L RL
Sbjct: 298 NYV--PHWLGLPLSTGTATHLEHMIFGALIVFFLIVEPHGLARL 339


>gi|94986941|ref|YP_594874.1| branched chain amino acid ABC transporter, permease protein
           [Lawsonia intracellularis PHE/MN1-00]
 gi|94731190|emb|CAJ54552.1| branched chain amino acid ABC transporter, permease protein
           [Lawsonia intracellularis PHE/MN1-00]
          Length = 347

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 56/333 (16%), Positives = 114/333 (34%), Gaps = 7/333 (2%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
            +  +  +  ++LFL    +    Y   +   I I  + A  L++V G  G+ SL     
Sbjct: 8   YIFNVLTIGVIVLFLLWAESTFNGYQIQLLNLIAINTILALSLNLVYGFTGMFSLGHAGF 67

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            AIGAY   +L         + I    +      ++            L  A   +    
Sbjct: 68  MAIGAYISALLILPAEQKEIMWILEPII--WPFSVLETPFWFSILAGGLVSAFFGLLIAL 125

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             + +    +     G     R+  +     +                  Y  L      
Sbjct: 126 SVLRLGGDYLAIATLGFSEIIRVILINVASITNGSLGIKGIPSHTDLFVTYGWLFL---- 181

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +   ++ L ++   N +++IRDN+ A   +    +  K  +F + + F G+ GA      
Sbjct: 182 TLFFLIKLLQSNFGNIFKSIRDNEIAAKVMGINTLHYKTLSFTIGAFFAGIGGALLGNLL 241

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             I P MF F     ++ IV+ GG+ S++     + I+  ++E    +   +     +  
Sbjct: 242 TTIDPKMFTFLLTFNILMIVVAGGLGSITGSILGSIIITILLEWLRAVESPFNFGSYQIP 301

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                    +  + L  +IL R   ++ ++  S
Sbjct: 302 -GIPGMRMVIFSLILLGIILYRREGIMGMKEIS 333


>gi|330822010|ref|YP_004350872.1| inner-membrane translocator [Burkholderia gladioli BSR3]
 gi|327374005|gb|AEA65360.1| inner-membrane translocator [Burkholderia gladioli BSR3]
          Length = 353

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 52/295 (17%), Positives = 110/295 (37%), Gaps = 9/295 (3%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L      A        S+  ++L+Y + A G ++++G  GLLS    I + +G+Y+  I+
Sbjct: 42  LAIAVACALPLALNSGSLATEVLVYALAALGCNLLLGYTGLLSFGQGIFFGLGSYTVGIV 101

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            +R+ L + L +  +  I      ++G  S++ RG Y  + TL   ++F  +      +T
Sbjct: 102 LTRFALPLPLALAAAVAIGALAAAVVGWFSIRQRGTYFVMLTLAFGQLFYFLAYTTPELT 161

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G  G+    R           +         +      Y  +  +   +  ++  +  +
Sbjct: 162 GGDNGLLDIPRPA---------LSIAGHALLPLATPWQFYGFVAVLFVAAFWLLRRVTLS 212

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                   IRDN+    ++   +   KL AF +S A  G+AGA  A            + 
Sbjct: 213 VFGRTLLAIRDNEARAAAVGYDVPRFKLLAFVLSGAVTGLAGALHALMTGIAPLSNIDYH 272

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            + +++   ++GG   L          +   +    +   +   L     + ++ 
Sbjct: 273 TSEMILVTTVIGGTGKLFASVLGAVFYVLFSDWLSTLWPRWLLLLGLVLIAVSLF 327


>gi|295696195|ref|YP_003589433.1| inner-membrane translocator [Bacillus tusciae DSM 2912]
 gi|295411797|gb|ADG06289.1| inner-membrane translocator [Bacillus tusciae DSM 2912]
          Length = 345

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 68/292 (23%), Positives = 122/292 (41%), Gaps = 15/292 (5%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            +  + + L +       Y+ S+ I + +  + A GLS+ +G  G +SL     Y IGAY
Sbjct: 17  AIVTVGIVLAVIPFAFGPYVLSVLIAVGLSSIVAVGLSLFIGYAGQISLGHAGFYGIGAY 76

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  IL  R     W  I +   I+G    ++  P+L+  G YLA+ATL +  I   I+I+
Sbjct: 77  TSAILALRGVD-GWATILIGMAITGGVAWLVSRPTLRLEGHYLAMATLGLGMILNIIMIQ 135

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W  +T G +G+     L        +  +              +YY++  M  L      
Sbjct: 136 WTSVTGGPSGLTGIPPLTVGSFVFDADWK--------------LYYLIWVMALLVIWGFR 181

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  + +  A + + +++ A  SL       K  AF +S+    +AG+ +A     +SP 
Sbjct: 182 NLVHSRVGRALKALAESEAAASSLGVPTARFKEMAFILSAMAASLAGSLYAFYLSFVSPS 241

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            F    +I  + + I GG+ S+       A++  + +    +    F S   
Sbjct: 242 TFDAIASIEFLIMAIAGGVRSVWGAPVGAAVVTILSQAMKSVVPALFPSAGG 293


>gi|158523021|ref|YP_001530891.1| inner-membrane translocator [Desulfococcus oleovorans Hxd3]
 gi|158511847|gb|ABW68814.1| inner-membrane translocator [Desulfococcus oleovorans Hxd3]
          Length = 370

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 73/342 (21%), Positives = 140/342 (40%), Gaps = 24/342 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            +    +   + +   L  F FL    +  Y   +   I I ++   GL+++VG  G +S
Sbjct: 31  FSSGAVVFWFVVLGCFLAAFPFLCKHYNYNYYIYVANYIAIQIIVVVGLNMLVGFTGQIS 90

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L     YA+GAY  + L +   L     + ++A+I+G  G ++GLP+L+  G YLAIATL
Sbjct: 91  LGHAGFYAVGAYGTITLMTEAHLPFLAALVLAALIAGLLGFLLGLPALRLEGPYLAIATL 150

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                   ++ K + +  G+ G+   D + F                         Y++ 
Sbjct: 151 GFGLTITQVIGKIELL-GGRQGLNAPDLVVFGRELKTDQD---------------FYFLA 194

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +  L       + +T +  A+  IRD   A  ++   ++F K  AFAVS+ + G+AG 
Sbjct: 195 VPIAVLLVLFARNVIKTKVGRAFIAIRDADIAAETMGINLVFYKTLAFAVSAFYAGIAGG 254

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A     I P++F    +I+ +++ ++GG+ S+        +L  V      +    + 
Sbjct: 255 LYAFVLGFIDPELFSLFLSIMFLTMAVVGGLGSIMGPIAGALVLGWVDLELRNILSIPYL 314

Query: 308 SLLKFDCS--------FNMRHTTLMVIALFLVILMRSHSLLR 341
                  S         +     +  + L  ++L     +  
Sbjct: 315 GDWLRSLSSSYFSLTGVSNIQFIVFGVILVSIMLFEPLGIYG 356


>gi|294341741|emb|CAZ90166.1| putative Urea ABC transporter, permease protein UrtB precursor
           [Thiomonas sp. 3As]
          Length = 550

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 90/291 (30%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           +  G +G++++       IGAY+  ++ S +   +   +  + + +     ++       
Sbjct: 276 VTYGLMGVINMAQGEFIMIGAYATYVMQSLFQHYLPGYVHYALIAAVPFSFVVAGGIGML 335

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 I   +     + +L  W         +        +       +       + +
Sbjct: 336 IER--TIIRRLYGRPLETLLATWGISLVLIQAVRSLFGPQNVQVDNPPWMSGGFNLMANL 393

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       ++     +   + L + RT +    R +  N+     +   I    + AF +
Sbjct: 394 ILPYNRMVIIAFTVVVLLGMWLLISRTRLGLFVRAVTQNRPMASCVGVRIARVDMLAFGL 453

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+AG   A S+             +    +V+LGG+  L+    A   L     L
Sbjct: 454 GTGIAGLAGC--ALSQIGNVSPEMGTGYIVDCFMVVVLGGVGQLTGTVAAAMSLGVANTL 511

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             G+                      +++A+ L I  R   +  L+  S  
Sbjct: 512 LEGVAGAVLAK-------------IAVLVAIILFIQKRPQGMFALKGRSVE 549


>gi|83950239|ref|ZP_00958972.1| ABC transporter permease protein [Roseovarius nubinhibens ISM]
 gi|83838138|gb|EAP77434.1| ABC transporter permease protein [Roseovarius nubinhibens ISM]
          Length = 329

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 56/315 (17%), Positives = 109/315 (34%), Gaps = 29/315 (9%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
                  +  Y+  +G +IL Y + A  L +++G   ++S         GAY+  +L   
Sbjct: 34  PVFAWATNDPYLVVIGTRILAYAIAAMALDLILGYGAMVSFGHAAYLGFGAYAVAVLSRH 93

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
               I L +     +S    +I G  SL+ RG Y  + TL   ++     +         
Sbjct: 94  GVTDITLHLLAGISLSAVFALITGWISLRTRGIYFIMITLAFGQMAYFFFVSLSSYGG-- 151

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                          V    R       ++  +  +YY  L +     ++   +  +   
Sbjct: 152 ------------DDGVTLDARSTVLGQPWLENDQVLYYTALALLIGLFTLCARIVTSRFG 199

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                 R+N     +L       +L+AF +S+    +AG   A   + ISP    +  + 
Sbjct: 200 RVLTGTRENTTRIEALGFAPFRYQLTAFVISACMTSVAGVMLANQAEFISPAFMSWHVSG 259

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            +I +V+LGG+ +L+       + + + EL      ++                    + 
Sbjct: 260 ELIVMVVLGGIGNLTGAIGGAFLALMLEELLNIFTEHW---------------KLFFGVI 304

Query: 328 LFLVILMRSHSLLRL 342
           L LV+L     +  L
Sbjct: 305 LVLVVLYSPDGISGL 319


>gi|292654119|ref|YP_003534017.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haloferax volcanii DS2]
 gi|291369483|gb|ADE01711.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haloferax volcanii DS2]
          Length = 358

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 58/338 (17%), Positives = 131/338 (38%), Gaps = 23/338 (6%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
            L K   +  LLA +  ++     G   +      + I  +IY   A   +I+ G  G  
Sbjct: 21  PLVKGVGLFGLLAALPTIIEIDVAGMELAALLSLKVLILTVIYAYTAQAWNIMSGYTGQF 80

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS--LKFRGDYLAI 124
           S      + +GAY+   L   + ++ W+ + V  +I+   G+++G  S     +G Y A+
Sbjct: 81  SFGHAAFFGVGAYATQALVVDFAVNPWVGMLVGGVIAAGYGLVIGALSFRFNLQGHYFAL 140

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           ATL  +E+ + ++     +              +     R     +   +     ++  Y
Sbjct: 141 ATLAFAELLRFVVTNMSELRGANG---------YFKPFPRDYGAEYGLVAFQFQNDLPYY 191

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y+++G   +   +   ++ + +   +  IR++++A  S+       KL   AVS+ F  +
Sbjct: 192 YLIVGFLLVVTLVSWVIKNSWVGLYFFAIREDERAAASVGVPSFRYKLIGVAVSAFFTAL 251

Query: 245 AGAFFAASRDRI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
            GA+++   + I    +F   +N+ ++   ++GG  +L      + I+  V E+      
Sbjct: 252 GGAYWSMYFNTIRPDTVFALFKNVELLLPAVVGGPGTLLGPIVGSFIVTPVSEIARTTF- 310

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                        N     +    L  +++     ++ 
Sbjct: 311 ----------SDINGLDRIIYGAFLVAIVIYSPRGVVS 338


>gi|254454873|ref|ZP_05068310.1| inner-membrane translocator [Octadecabacter antarcticus 238]
 gi|198269279|gb|EDY93549.1| inner-membrane translocator [Octadecabacter antarcticus 238]
          Length = 397

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 69/358 (19%), Positives = 136/358 (37%), Gaps = 29/358 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
             I+  L ++ P LL  F   +   ++      +  + +I+ +FA G +++ G  G LS 
Sbjct: 12  MLIVFGLVMLAPFLLNPFPEGSAMAQFNAGYPDLMQRFVIFGIFAVGFNLLFGLTGYLSF 71

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                  IG+Y+ +       L++   I V+ +++GA  +++G  SL+  G Y +I TL 
Sbjct: 72  GHAAFLGIGSYAAIWSMKLVTLNVIPGILVAIVVAGAFALVVGFVSLRRSGIYFSILTLA 131

Query: 129 M-SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM---- 183
               +F        PIT G+ G+ + +    L     + I       + +     +    
Sbjct: 132 FAQMMFAMAYSVLTPITGGETGLQIKNTDTPLFGGPETGIGRANLFGAEMGNSYELTLGN 191

Query: 184 --------YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                   YY+      L+  + + + R+      R ++ NQ+       T     LSAF
Sbjct: 192 HLFTFNLGYYIAGFFLLLAFYLSIRIFRSPFGIMLRAVKSNQQRMNYTGLTPKRYTLSAF 251

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            +S  + G+AG    A   ++ P+   ++ +  V+ + ILGG  +L        ++  + 
Sbjct: 252 VISGMYAGLAGGLMVAMDTQVGPERMFWTASGEVVIMTILGGAGTLLGPVLGAGMIKYME 311

Query: 296 ELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVILMRSHSLL 340
            +   +N    +    F                        M I   LV++     L+
Sbjct: 312 NIISKINKDILHEWFAFLPDGLEDVIVSMVYPFIGKGWHLTMGILFMLVVIFLPGGLV 369


>gi|332799564|ref|YP_004461063.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp.
           Re1]
 gi|332697299|gb|AEE91756.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter
           sp. Re1]
          Length = 354

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 77/356 (21%), Positives = 137/356 (38%), Gaps = 45/356 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           KY   +    ++    +FL    T    Y+  +     I  + A  L++  G  GL SL 
Sbjct: 7   KYRNAILTTVLIAAFFIFLSWTKTHLDAYVMRIFNLCAINSILALSLNLTNGFTGLFSLG 66

Query: 70  CVIAYAIGAYSYVILGSRY-------------------GLSIWLLIPVSAMISGACGMIM 110
                AIGAY+  +L                        +  +  + ++ ++S   G ++
Sbjct: 67  TAGFMAIGAYTSALLTMPPGIKTMNFFMQPINPMLLNINVHFFFALLIAGILSALVGFLI 126

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
           G P LK +GDYLAIATL   EI   +    + ITNG  G+    +               
Sbjct: 127 GAPVLKLKGDYLAIATLGFGEIISVVFTNTQTITNGALGLKGIPQYTDQ----------- 175

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                         Y   G+  +    +  L  ++   A++ IR+++ A  ++   +   
Sbjct: 176 --------------YWSWGVAIVIILGLKSLVNSSYGRAFKAIREDEIAAQAMGINLFNH 221

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           K  +F +S+   G+ GA  A     I P MF+F     ++ +V+LGGM S++    +  I
Sbjct: 222 KTLSFTISAFIAGIGGALLANLNSTIDPTMFRFFFTYQILLMVVLGGMGSITGSVISACI 281

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
           +  ++EL   +        +      +     +  I L LV+L   H ++     S
Sbjct: 282 ITVLMELLRVVESPMDLGFISLP-GISGMRMVVFAILLILVVLFLRHGIMGENEIS 336


>gi|300088538|ref|YP_003759060.1| inner-membrane translocator [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299528271|gb|ADJ26739.1| inner-membrane translocator [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 310

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 69/303 (22%), Positives = 117/303 (38%), Gaps = 21/303 (6%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y  +  + I I+ + A  L+   G  GL +   V  + IGAYSY IL     +   L + 
Sbjct: 7   YALNALVYIGIFAIVAKSLNAEYGYTGLANFGKVAFFMIGAYSYAILIDVGVIWP-LALV 65

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           ++  IS   G+++ LP+++ R DYLAI TL   EI +        + NG  GI +     
Sbjct: 66  LAGAISSLFGLLISLPAIRLREDYLAIVTLTFGEILRIFFKAEDWLANGVWGINIPSVFA 125

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                             F +       ++ G+  L    + +L  +      R +RD++
Sbjct: 126 ---------------ADDFALRLWLNLALVAGVLLLCYLFMHYLTNSPFGRIMRALRDDE 170

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A  ++    I  K   F + SA  G+ GA FA     I+PD F       +  +V+LGG
Sbjct: 171 VAADAIGKNRIKYKSIVFMIGSAMAGLGGALFANFLGYITPDSFLPIITFTIWMMVMLGG 230

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
             S   +    A +         +  Y     +            +  + + L+++ R  
Sbjct: 231 PASNVGVIVGAAAVQLFERGTIILKDY-----ITLPIDPTNLQNIMFGVIIILILMYRPG 285

Query: 338 SLL 340
            L 
Sbjct: 286 GLF 288


>gi|126734292|ref|ZP_01750039.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. CCS2]
 gi|126717158|gb|EBA14022.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. CCS2]
          Length = 358

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 79/344 (22%), Positives = 141/344 (40%), Gaps = 21/344 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F L+L++    + +       + +L +    +  +  S+ +  LIY + A GL+I+ G  
Sbjct: 20  FPLKLDRIGFWVTMA------VAWLVIPFVINDYWASSLLVPFLIYAIAAIGLNILTGYC 73

Query: 64  GLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G +SL      A+GAY+   ++ S   ++I + I ++  I+   G   GLPSL+ +G YL
Sbjct: 74  GQVSLGTGGFMAVGAYACYKLMTSFPDVNIMIHIVLAGGITAMVGAAFGLPSLRIKGFYL 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ATL        +  K     N  A   ++             +      +        
Sbjct: 134 AVATLAAQFFLVWLFNKVSWFYNYSASGQISAP---------ERLVAGVAVTGPSTPAWA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y + L    + A I   L R  +  +W  IRD   A   +    + AKL+AFAVSS F+
Sbjct: 185 QYLICLFFVTVCAIIARNLTRGTLGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFV 244

Query: 243 GMAGAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G+AGA F A         + F   ++ +V+ ++I+GG+ S+       A L+ +      
Sbjct: 245 GIAGALFFAVYLGAVEVGEAFGIQKSFLVLFMIIIGGLGSIFGSFAGAAFLVLLPVALKW 304

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +              F      ++   +   ++   H L +L  
Sbjct: 305 IGVDVMGWPTDLVAHF---QLVIVGALIMFFLIKEPHGLAQLWR 345


>gi|254502963|ref|ZP_05115114.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222439034|gb|EEE45713.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 326

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 62/315 (19%), Positives = 116/315 (36%), Gaps = 22/315 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI--------LGSRY 88
            Y+        I  +   GL++  G+ GL +   V ++  GAY  +I            +
Sbjct: 6   SYLVFFSTVAAILAIAVLGLNLQWGNTGLFNGGVVASFGAGAYGTLILGGTPQDGHLGGF 65

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            L   L +    + +G    ++G  +L+ R DYLAIAT  ++  F+N++     +T G  
Sbjct: 66  DLFYPLALLGGMIFAGVLAWVVGKLTLRLRHDYLAIATFGVAVAFENVMRNATAVTGGAQ 125

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           GI   +R                   S   Y +     +L    L    +  L  +    
Sbjct: 126 GIRGFERP------------LQSLIGSGFTYNLVFLIAVLICLVLVYVFLERLTVSPFGR 173

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
             R IR+++ A  SL  +    +L+AF   S  IG+AG+ +      +SP          
Sbjct: 174 LLRAIREDETAARSLGKSPDKVRLAAFVTGSVIIGLAGSLYGTFYAFVSPQDVLPILTFQ 233

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           + +++I+GG  +         ++ G           +    ++           L+ + +
Sbjct: 234 IWAMLIVGGAGNNKGAMAGAFLIWGSWTFSGWALSRFAP--VEVQLYTGSIQFVLIGMVI 291

Query: 329 FLVILMRSHSLLRLR 343
             ++L R   L   R
Sbjct: 292 VGMLLWRPQGLFPER 306


>gi|154250146|ref|YP_001410971.1| inner-membrane translocator [Fervidobacterium nodosum Rt17-B1]
 gi|154154082|gb|ABS61314.1| inner-membrane translocator [Fervidobacterium nodosum Rt17-B1]
          Length = 353

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 57/343 (16%), Positives = 114/343 (33%), Gaps = 9/343 (2%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++      +   +  V   ++ L +   K   Y   +   + IY + A  L++V G  G+
Sbjct: 1   MKSKAKRDLTLTVLFVIFAIILLQIANVKFDTYKKQILSLMAIYGIMAVSLNLVNGITGV 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
            SL       +GAY+  +L         + I      S     +            L  A
Sbjct: 61  FSLGHAGFILLGAYTSALLTIPPEQKAMIFIIAPP--SPFIVNLHTDFLTATIIGGLVAA 118

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                  F  + +    +     G     R+  L     +            +      +
Sbjct: 119 FGAFIIGFPVLRLSGDYLAIASLGFSEVLRILALNLQSIT----NGSLGLKGLPNYTNIW 174

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
              G  F++   I+ L +++   A   IRDN  A  ++   +    L +F VS+ F G++
Sbjct: 175 WSWGWLFVTILFIVSLVKSSYGRALLAIRDNSIAAEAMGINVFKHTLLSFVVSAFFAGVS 234

Query: 246 GAFFAASRDRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           GA +A     I P    F       V+ +V+LGG+ S+S       I   ++E       
Sbjct: 235 GALYAHWLTTIDPRITTFGPILTYYVLIMVVLGGLGSISGSVIGAIIFAFLMEWLRAFEQ 294

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
            +      F  +       ++ +   + +++    +      +
Sbjct: 295 PFTLFGKDFP-AIQGMRMLVLSVLFVVTMIVWKRGIFGRAEIT 336


>gi|328542036|ref|YP_004302145.1| amino acid or sugar ABC transporter, permease [polymorphum gilvum
           SL003B-26A1]
 gi|326411786|gb|ADZ68849.1| Amino acid or sugar ABC transport system, permease protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 543

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 107/305 (35%), Gaps = 34/305 (11%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGLSIWLLIPVSAMIS 103
            A GL+I  G +G++++       IGAY   ++           +  S+ + +P++ +++
Sbjct: 264 AAIGLAITFGVMGVINMAHGEMVMIGAYVTFVVQEVIRGSAPGLFDYSLLIALPLAFLVA 323

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
           GA G+ +    ++F         L+ +     IL +      G     V +  +  G   
Sbjct: 324 GAVGIGIERGIIRFLYGRPLET-LLATWGLSLILQQAVRSLFGPTNREVGNPSFMSGA-- 380

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                   F    +       ++++    + A +IL L++T+   + R +  N++   S+
Sbjct: 381 --------FDIGQLTITYNRMWIVVFALVVFAGLILVLKKTSFGLSMRAVTQNRRMAASM 432

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
                +     F + S   G+AG   A S+             I    +V+ GG+ +L  
Sbjct: 433 GIRTPWIDAFTFGLGSGIAGIAGV--ALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWG 490

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                  L  V +                          L+++ + L I  R   L  L+
Sbjct: 491 TLVGAITLGVVNKFLEPYAGAVLGK-------------ILVLVFIILFIQKRPRGLFALK 537

Query: 344 TPSNF 348
             +  
Sbjct: 538 GRAVE 542


>gi|229190059|ref|ZP_04317065.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus ATCC 10876]
 gi|228593388|gb|EEK51201.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus ATCC 10876]
          Length = 333

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 59/334 (17%), Positives = 128/334 (38%), Gaps = 31/334 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 15  VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  R      +  + I  + ++S     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 75  VALLFDRQGVSITNFLIGIVAAIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YYV L        +
Sbjct: 135 EKWRGLTHGGDGFTFGVPEIFRDRF-------------------TFYYVSLVCLCFIFIL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGIVAAISGGLFVITLRFVN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L      + I+  +      +   Y            
Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLIGAIAGSGIIESLKYYLSELATEY---------PIF 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            R T ++ +   +V+L+    L+         +R
Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGTVKKLKSFKR 320


>gi|226364273|ref|YP_002782055.1| ABC transporter ATP-binding protein [Rhodococcus opacus B4]
 gi|226242762|dbj|BAH53110.1| putative ABC transporter ATP-binding protein [Rhodococcus opacus
           B4]
          Length = 845

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 64/322 (19%), Positives = 115/322 (35%), Gaps = 34/322 (10%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
              LL    L A     Y         +Y +    +S++ G  G+ S+      AIGAY+
Sbjct: 29  AAALLTIAVLSAGLVPGYQVYTVGLAAVYGLIVLSISLLAGWTGIWSIGHPAMVAIGAYA 88

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                S    S +  +  +  +    G  +G    +F   Y+A+ TL  + +   I+  W
Sbjct: 89  TAYGSSHGWGSAFTSVV-AVALCAMLGGFLGFAGSRFSVLYVALLTLAFTLVTLEIIGAW 147

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           K +T G  G+ V                        V     + Y+ +G+  L+ ++ ++
Sbjct: 148 KSVTGGDQGVPVDAF------------------GDLVPSSDDVTYLAVGVLGLAITVSVF 189

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +RRT I       + +  A  S+           FA+S+   G+AG   A     ISP+ 
Sbjct: 190 MRRTTIRMRMVAAKTHPLAGRSIGIAPELQSSLGFAISAGVAGLAGVLLALLSGFISPEG 249

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F     + +I+  +LGG  S+       A L     L   +               ++  
Sbjct: 250 FSMVFAVNLIAATVLGGTGSVIGAVLGGAFLASAPTLSSSL---------------SIDQ 294

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
             L+   L L +L  +  ++  
Sbjct: 295 PYLIGGVLILTLLFLADGIVPT 316


>gi|332527106|ref|ZP_08403185.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2]
 gi|332111536|gb|EGJ11518.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2]
          Length = 354

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 79/344 (22%), Positives = 139/344 (40%), Gaps = 23/344 (6%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           + +F +R ++    L L          + +     +    ++ I  LI  + A GL+I+V
Sbjct: 17  LQVFPIRQDRVAIALLLAL------AIVVVPLVAPEYLFRAILIPFLILSLAALGLNILV 70

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRG 119
           G  G +SL      A+GAY+      R      +  I +  + S A G++ GLPSL+ +G
Sbjct: 71  GYCGQISLGTGAFMAVGAYAAYNFQVRIDGMPVVASILLGGLCSTAVGVLFGLPSLRIKG 130

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
            YLA+ATL          ++ K +TNG     V+                  F    +  
Sbjct: 131 LYLAVATLAAQFFVDWAALRLKFVTNGSTSGSVSVAELQ-------------FLGIPIES 177

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
            +  Y   L    + A++   L R  I   W  IRD   A   +    ++AKLSAFAVSS
Sbjct: 178 PVQKYLFCLAFVLVFATLAKNLVRGHIGREWMAIRDMDVAAAVIGIRPVYAKLSAFAVSS 237

Query: 240 AFIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
             +G+AGA +         P  F  + +  ++ ++I+GG+ S+       A ++ +    
Sbjct: 238 FIVGVAGALWGFVHLGSWEPAAFGVNRSFDLLFMIIIGGLGSIMGSFFGAAFIVVLPIAL 297

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             +   Y+  +             +    +   +++  H + RL
Sbjct: 298 DSL--PYWFGIPIDTALAAHLTFMIFGALIVFFLIVEPHGIARL 339


>gi|299132188|ref|ZP_07025383.1| ABC transporter related protein [Afipia sp. 1NLS2]
 gi|298592325|gb|EFI52525.1| ABC transporter related protein [Afipia sp. 1NLS2]
          Length = 622

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 59/334 (17%), Positives = 120/334 (35%), Gaps = 26/334 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K    L        L++  F+       +  +   +IL++ +F  G  I+ G  GLLS  
Sbjct: 3   KQRPFLIETLTAIGLIIAPFILPHLG--FAPNTVNRILVWGLFGIGFDILFGFTGLLSFG 60

Query: 70  CVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
               Y  G +    +L       +   + +  + + A G ++GL +L+  G Y A+ T+ 
Sbjct: 61  QSALYGTGGFVAAYLLTIAGFPHVITALFIGMVAAAAVGYLVGLVALRSTGIYFAMITVA 120

Query: 129 MSEIFQNI-LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           ++E+F  +        T G+ G+            +                   +Y  L
Sbjct: 121 IAEVFFFVEFNPLSDWTGGENGLPGVPSPSLDLGFIHMHF----------TTGWSLYGFL 170

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
               F+   + L + R+ +    R IRDN     ++   +   KL+AF V++A+ G AG 
Sbjct: 171 AFWFFIGIVLGLRIVRSPVGAVLRAIRDNPLRAAAVGHNVHGYKLTAFVVAAAYAGFAGG 230

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
                +  + PD F F  +  ++ +  +GG  +L        + + + +           
Sbjct: 231 LLGVMQAFMPPDAFMFDTSAQLVMMTAIGGTGTLFGPLLGATVWLFLQDFLQA------- 283

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                          ++ +   L++      L+ 
Sbjct: 284 -----ALGLGAAWKLVLGVIFVLLVCFLRRGLIG 312


>gi|312880169|ref|ZP_07739969.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Aminomonas paucivorans DSM 12260]
 gi|310783460|gb|EFQ23858.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Aminomonas paucivorans DSM 12260]
          Length = 294

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 74/307 (24%), Positives = 133/307 (43%), Gaps = 31/307 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            +Y  S+   I+I  + A GL+++VG  G +SL     + IGAY+  +L +   LS W  
Sbjct: 2   NEYTLSVATLIVIQAIAASGLNVIVGYAGQISLGHAAFFGIGAYTCALLTTSGNLSFWGA 61

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +PV  +++   G+++GLPSL+ + D+LAI T+ ++ I + + + + P   G  GI    R
Sbjct: 62  LPVVLLVAAGVGVLLGLPSLRLKEDFLAITTIGINFIVEALFL-YTPFFGGALGIGGIPR 120

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           +                     +  +    + L    L+  +     R     A   IR+
Sbjct: 121 V---------------VLFGIKLKGLGFLLLCLAFLALALLLCWAFTRCWSGLACFAIRE 165

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  S+  + +  KL AF + +    + GA +A     IS   F F  +++++S+V+L
Sbjct: 166 DETAAASMGISPVRFKLLAFVLGTVLAALGGALYAHFMRFISAGDFSFPVSVMLLSMVVL 225

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM +L        +L  + E+   +  Y                  L    L L+I  +
Sbjct: 226 GGMGTLWGPLVGAVVLGVLPEVFRPLTDY---------------RMFLYAALLLLMIRFQ 270

Query: 336 SHSLLRL 342
              LL  
Sbjct: 271 PGGLLGE 277


>gi|304393396|ref|ZP_07375324.1| inner-membrane translocator [Ahrensia sp. R2A130]
 gi|303294403|gb|EFL88775.1| inner-membrane translocator [Ahrensia sp. R2A130]
          Length = 359

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 74/328 (22%), Positives = 135/328 (41%), Gaps = 13/328 (3%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +   +   +  + +    +  +++S+ I  LI+ +   GL+I+ G  G LSL       +
Sbjct: 27  VGLAIIIFVAAVVIPVFGNDLFLNSIMIPFLIFTLATIGLNILTGYCGQLSLGTGAFMGV 86

Query: 77  GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GAYS   +      +SI + I +S   + A G++ GLPSL+ +G YLAI TL      + 
Sbjct: 87  GAYSCYKLATIFPEVSILIHILLSGFFAAAVGVVFGLPSLRIKGLYLAITTLAAQFFLEW 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             ++   + N      + +    L         F    +      +  Y ++LG+  +  
Sbjct: 147 AFVRVAWLYNYNDSGAIQNVPQKL---------FGIQITGAAAEPVTRYMLVLGIVIMFT 197

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254
            +   + R  I  +W  IRD   A   +    + AKLSAFA+SS   G++GA        
Sbjct: 198 WLTSNVIRGRIGRSWMMIRDMDIAAELMGIKPLNAKLSAFAMSSYLCGVSGAMLVFFWLG 257

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            +  + F  + +  ++ +VI+GGM SL       A +  +  L   +       +     
Sbjct: 258 SVEAESFSINLSFQILFMVIIGGMGSLIGCFMGAAFIFVLPLLIRAVTRGVGLDISGAMI 317

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 T  +   +   +++  H L RL
Sbjct: 318 E--HISTMSIGALIIFFLIVEPHGLARL 343


>gi|206578612|ref|YP_002240186.1| branched-chain amino acid ABC transporter, permease protein
           [Klebsiella pneumoniae 342]
 gi|288936931|ref|YP_003440990.1| inner-membrane translocator [Klebsiella variicola At-22]
 gi|290510012|ref|ZP_06549382.1| branched-chain amino acid ABC transporter, permease [Klebsiella sp.
           1_1_55]
 gi|206567670|gb|ACI09446.1| branched-chain amino acid ABC transporter, permease protein
           [Klebsiella pneumoniae 342]
 gi|288891640|gb|ADC59958.1| inner-membrane translocator [Klebsiella variicola At-22]
 gi|289776728|gb|EFD84726.1| branched-chain amino acid ABC transporter, permease [Klebsiella sp.
           1_1_55]
          Length = 349

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 71/353 (20%), Positives = 128/353 (36%), Gaps = 44/353 (12%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           LA++   +  L         YI  +   I I+++ A   +++ G  G LSL      A+G
Sbjct: 15  LAIIVICIALLAGINVVFNDYIVRVISTIFIFMILAVSYNLINGVTGQLSLEPNGFVAVG 74

Query: 78  AYSYVI-------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           AY   +                               + +S + + A  + + +P  + R
Sbjct: 75  AYVTALLILSSDSKVDMFEMAAPSPWILSLHAGFLPALLISGLCAAALAVCLAVPVFRVR 134

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           GDYLAI TL    I + + I    ITNG  G+    +                       
Sbjct: 135 GDYLAIVTLGFGFIIKILAINNPQITNGAIGLNDIPQQPH-------------------- 174

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
               + +       L+  +IL L  +      + IRD++ A  ++       K  AFA S
Sbjct: 175 ----LLFWCGLFALLATGMILQLVWSKYGRMMKAIRDDEDAAIAMGVNTFRIKTCAFATS 230

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           + F G+ G   A+    ISP +F F     ++ I++LGG+ S +     T +++G  E  
Sbjct: 231 AFFEGIGGGLLASLLTTISPGLFDFMLTFQLLIIIVLGGLGSTTGALLGTVLVVGSGEWL 290

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             ++            ++      +  + L +++L     LL  +       R
Sbjct: 291 RFLDQPLQFFGHDLG-AYPGLRMVVFSLLLLIIMLFAREGLLGKKEIWQMGRR 342


>gi|254423465|ref|ZP_05037183.1| amino acid or sugar ABC transport system, permease protein,
           putative [Synechococcus sp. PCC 7335]
 gi|196190954|gb|EDX85918.1| amino acid or sugar ABC transport system, permease protein,
           putative [Synechococcus sp. PCC 7335]
          Length = 400

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/326 (14%), Positives = 91/326 (27%), Gaps = 29/326 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG----- 85
                  +   +  + L   + A G+ ++ G  GLLSL   I +AIG Y   +       
Sbjct: 15  FPLILSNFRLGLLGRFLCLSIVALGIDLIWGFTGLLSLGHGIFFAIGGYVIAMNLQLQSL 74

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN---------- 135
           S   +  +  +   + +          P        +      +                
Sbjct: 75  SEGSIPDFFSLYGVSELPAFWRPFYSFPVTLIAIVVIPSIIAGLLGYLVFRNRIRGVYFS 134

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           IL +   +          + +        +    F         +   Y V + +  L+ 
Sbjct: 135 ILTQAALVVFFNFFNGQQELINGTNGLKTNTTELFGQSVGGDGMQFTFYCVTVVLLALTY 194

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +  WL           IRD++             K+  FAVS    G+AGA +      
Sbjct: 195 GLCRWLTSGRFGRMLIAIRDDENRVRFSGYDPTAFKVLVFAVSGGIAGVAGALYTVQSGI 254

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +SP     + +I ++  V +GG  SL         +     L                 S
Sbjct: 255 VSPQYMSIAFSIEMVIWVAVGGRASLVGAIIGALAVNWGRALLSE--------------S 300

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
           +             +V+ +    ++ 
Sbjct: 301 YPEIWLFFQGALFLIVVTVLPDGIIG 326


>gi|171060111|ref|YP_001792460.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
 gi|170777556|gb|ACB35695.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
          Length = 354

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 75/343 (21%), Positives = 136/343 (39%), Gaps = 23/343 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +R ++      +  ++      L + A  S+    ++ I  LI  + A GL+I+VG
Sbjct: 18  QIFPIRQDR------IAVLLLLAFAALVVPAIASEYVFRAILIPFLILSLAALGLNILVG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA-CGMIMGLPSLKFRGD 120
             G +SL      A+GAY+      R      +   +   +     G++ G+PSL+ +G 
Sbjct: 72  YCGQISLGTGAFMAVGAYAAYNFSVRIDGMPLIAALLLGGLCATGVGVLFGIPSLRIKGL 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL          ++ +  TN               ++    +         +   
Sbjct: 132 YLAMATLAAQFFTDWAFLRIRWFTN-------------DSSSGSVSVAGLNVLGIPIDTP 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y   L    + A +   L R  I   W  +RD   A   +    I+AKL+AFAVSS 
Sbjct: 179 VQKYLFCLAFLSVFALLAKNLVRGNIGREWMAMRDMDVAAAVIGIRPIYAKLTAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            +G+AG  +         P  F    +  ++ +VI+GG+ S+       A ++ +  L  
Sbjct: 239 IVGVAGGLWGFVHLGSWEPAAFSIDRSFQLLFMVIIGGLGSIMGSFFGAAFIVLLPILLD 298

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             N  Y+  +     +     + +    +   +++  H L RL
Sbjct: 299 --NAPYWFGIPIDTATAAHLTSMIFGALIVFFLIVEPHGLARL 339


>gi|269792299|ref|YP_003317203.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269099934|gb|ACZ18921.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 290

 Score = 97.6 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 65/309 (21%), Positives = 130/309 (42%), Gaps = 40/309 (12%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            +Y+  + I + I  + A G+S++ G  G+ SL      A+GAY+  IL   + +   L 
Sbjct: 2   DQYLQGIIILLCINCIAAMGVSLLTGFTGIFSLGHAGYMAVGAYAVAILTVEHEIPWALA 61

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  + + +     ++G+P+LK  GDY AIA++ + E  + I+  W+ +T G  G    + 
Sbjct: 62  LIAAGLFAALLAFVVGVPTLKLMGDYYAIASIGLGEAIRLIIENWQSVTRGARGYPGIED 121

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                         V +G+  L  + + +L ++     ++  RD
Sbjct: 122 FVSAP-------------------------VAVGIALLLGTFMFFLVQSNFGRGFKACRD 156

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   L       ++ +  +S  + G+AG   A     I P MF  +++  + ++V+ 
Sbjct: 157 DYLAASLLGFNTARYRVLSLTISGFYCGIAGGMLAGFMGFIQPVMFDINKSTELTAVVVF 216

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ SLS     T ++  V EL   ++ Y                  +  + L L++++R
Sbjct: 217 GGLGSLSGTLIGTTVITLVTELFRPISQY---------------RMLIYGLVLVLIMVLR 261

Query: 336 SHSLLRLRT 344
              ++  R 
Sbjct: 262 PEGIMGQRE 270


>gi|170780970|ref|YP_001709302.1| putative integral membrane transport protein [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|169155538|emb|CAQ00650.1| putative integral membrane transport protein [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 323

 Score = 97.6 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 61/307 (19%), Positives = 123/307 (40%), Gaps = 4/307 (1%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
               Y +   GL I  G  GLL+       AIG Y++ I    Y   +W  +  + + S 
Sbjct: 17  TTAAYALATVGLVIHFGFTGLLNFGQAGFMAIGGYAFAITAVMYEWPVWASLLAAIVAST 76

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQ-NILIKWKPITNGKAGIYVADRLYFLGTTV 163
              +I+G+P+L+ R DYL+I T+  +EI + ++         G +         F     
Sbjct: 77  VFALILGIPTLRLRADYLSIVTIAAAEIIRLSVKTPEFSSVTGGSEGINGAANGFNALNP 136

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
               RF     ++   + ++  V  G+  ++  ++  L R+      + +R+++ A  +L
Sbjct: 137 LPEGRFGAGVLTYSSDQWWIRIVGWGLVGIACLLVFLLMRSPWGRVLKGVREDEDAVRAL 196

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              +   K+ A  +   F G+AG  F      + PD +       + +I++LGG  ++  
Sbjct: 197 GKNVYSYKMQALVLGGVFGGLAGVVFILP-RSLQPDNYGTQLTFFLYTIMLLGGAATIFG 255

Query: 284 IAKATAILIGVVELCCGMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
               + I    + L  G+         L             ++ +AL L+++ R   +  
Sbjct: 256 PVIGSIIFWVTLSLSDGLLSLAVTNEWLPLSSTQQGPIRFIIVGVALMLLVIFRPQGIFG 315

Query: 342 LRTPSNF 348
            +  ++F
Sbjct: 316 KKKETHF 322


>gi|71906547|ref|YP_284134.1| inner-membrane translocator:ABC transporter related [Dechloromonas
           aromatica RCB]
 gi|71846168|gb|AAZ45664.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter membrane protein 1,
           HAAT family / amino acid/amide ABC transporter
           ATP-binding protein 1, HAAT family [Dechloromonas
           aromatica RCB]
          Length = 951

 Score = 97.6 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 51/333 (15%), Positives = 113/333 (33%), Gaps = 31/333 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+   L  + +      ++  ++   + +  + A GL ++ G  GL S        +GA
Sbjct: 361 LVLAVFLGAIAVAPLVLPEFYVTLLNYVGLSALVALGLVLLTGVGGLTSFGQAAFVGLGA 420

Query: 79  YSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
           YS              +  G S W  + +  +I+    +I+G  +LK  G YL + T+  
Sbjct: 421 YSTAWLTTTADLPSWLAFTGGSPWAALLLGLVITATVAIILGSVTLKLSGHYLPLGTMAW 480

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 +    + +  G AG+     +   G  +                  + YY++  
Sbjct: 481 GISLFFLFGNMEFL-GGHAGLSNLPAIKIFGFELLDNR--------------YYYYLVWA 525

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
               +      L  +    A R ++       ++      A++  F +++     AG  +
Sbjct: 526 FVLAALFTTKNLLDSREGRAIRALKGGMVMAEAMGVDTSRARMVIFVIAALHACAAGWLY 585

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A  +  ++P  F     I  + + ++GG   +        ++  + +    +    F S 
Sbjct: 586 AHLQRFVNPTPFGLHIGIEYLFMAVVGGAGQVWGALVGAGVITVLKQWLQDILPKLFGSA 645

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             F        T +  + + +V+      L  L
Sbjct: 646 GHF-------ETIVFGLMMIVVLHRAREGLWPL 671



 Score = 44.1 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 76/278 (27%), Gaps = 22/278 (7%)

Query: 50  VMFAWGLSIVVGSLGLLSLNCVIA------YAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
            +   G  ++  + G   L            A+   ++V+              ++  I 
Sbjct: 71  GVLTLGADVITATPGRRRLGQSALWNLVYPLAVAGLTWVLPLQELPH--LAKACLALAIV 128

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
              G ++   + +   +   +  LI+S     +++    +  G  G   A          
Sbjct: 129 VPMGPMLYRIAFQPVAEAPVLVLLIISVALHLLMVGLGLLIFGPEGSRTAPFSDAQ---- 184

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                        ++       VLL    L   + L+  RT    A R    N+     +
Sbjct: 185 --------IEIGSLMIGGHTIVVLLASLLLIVGLYLYFDRTLAGKALRATAINRNGARLM 236

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
             +   A    F  ++    ++G   A            F   +      I+GG+ S   
Sbjct: 237 GISPALAGRQTFFFAALIGTLSGLLVAPLTTV--YYDSGFLIGLKGFVAAIIGGLASYPL 294

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            A    I+  +          + + L+       +   
Sbjct: 295 AAAGAIIVGLLESFSSFWASAFKDVLVFTLIIPVLIWL 332


>gi|328952955|ref|YP_004370289.1| ABC-type transporter, integral membrane subunit [Desulfobacca
           acetoxidans DSM 11109]
 gi|328453279|gb|AEB09108.1| ABC-type transporter, integral membrane subunit [Desulfobacca
           acetoxidans DSM 11109]
          Length = 346

 Score = 97.6 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 68/356 (19%), Positives = 127/356 (35%), Gaps = 45/356 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +         L L L    T +  Y   +   I I++  A   +++ G  G L L 
Sbjct: 6   RRRNLFLTSGTAILLFLLLAGAQTWANDYHIRILNNIAIFITMAVSYNLINGVCGQLHLG 65

Query: 70  CVIAYAIGAYSYVILG-------------------SRYGLSIWLLIPVSAMISGACGMIM 110
                 +GAY+  +L                    +++  S  + +    +++     + 
Sbjct: 66  PNAFVTLGAYTAALLTLSPAEKQLSFLLSPLIWPLNQFSTSFPVALMAGGLVAVVFAFLT 125

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
           G P L+ RGDYLAI TL   E+ + +    + +TNG  G+                    
Sbjct: 126 GFPVLRVRGDYLAIVTLGFGEVVRVLANNLQSVTNGPLGLKGLPPFTN------------ 173

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                         +   G   ++  +I  +  +    A + IR+++ A  ++       
Sbjct: 174 -------------LWWTWGTAVMALVVITGIIHSGYGRAMQAIREDETAARAMGIDPFRH 220

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
            L AF VS+ F+G+AG   A     ISP +F F     ++ I++ GG+ S +    A  +
Sbjct: 221 LLLAFLVSAFFLGVAGGLLAHLITTISPTLFTFFLTFNLLIIIVFGGLGSTTGAVLAAIV 280

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
           L    E    +        +       +R      + L +++  R   LL  +  S
Sbjct: 281 LTWGGEWLRVVEEPILIGCIHLPGIPGLRAVIFSFLLLVMILFFR-RGLLGRQEFS 335


>gi|222082220|ref|YP_002541585.1| branched-chain amino acid ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221726899|gb|ACM29988.1| branched-chain amino acid ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 324

 Score = 97.6 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 71/323 (21%), Positives = 120/323 (37%), Gaps = 30/323 (9%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                    Y   +    L++ + A GL++ +G  G +SL      AIGAY   +     
Sbjct: 18  VALPFTQSNYGILVLCSWLVFSIAAMGLNLTLGYAGQVSLAQAGFMAIGAYITALTTMAG 77

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
                L +  S +     G+++G P+L+ +  +LA  TL  + +   +L   + +TNG  
Sbjct: 78  VPWP-LAMLASMLACFMIGLLLGYPALRVQHHFLAFITLAFNALVVLVLRNEEWLTNGTY 136

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           GI    R                         I  Y+ +L +  L+A  +  + R+    
Sbjct: 137 GIAGIARPVVF--------------GFATQRPIPFYFFVLALFILTAFALYGIIRSPWGR 182

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           A++ +R+N     SL   I    L AFA+ SAF G+AGA  A     I P  F  + ++ 
Sbjct: 183 AFKALRENPVRANSLGVDIRRITLLAFAIGSAFGGLAGALLAQLTQYIDPQSFGLTISLR 242

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           V+ +VI+GG            ++I   E       YY                 L  I +
Sbjct: 243 VLLMVIVGGAGFFFGPILGALLIILAPEFFRFTEGYY---------------LMLYAILV 287

Query: 329 FLVILMRSHSLLRLRTPSNFLER 351
             +++     L  L        +
Sbjct: 288 IALMIFCPSGLFGLVERMKTRWK 310


>gi|89899029|ref|YP_521500.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89343766|gb|ABD67969.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 337

 Score = 97.6 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 59/324 (18%), Positives = 118/324 (36%), Gaps = 21/324 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
              V    + L L    + +Y   +  +I+++ +FA  L ++VGS GL+       + IG
Sbjct: 6   FFFVAAAFVLLALWPLMAGQYGVDLVTKIMVFAIFALSLELLVGSTGLVCFGQAAFFGIG 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+ V+L  + G    L +  + +++ A   ++             I   +        +
Sbjct: 66  AYATVLLTPQDGAPSLLWLLPACVLAAALYALLVGALSLRTKGVYFIMVTLAFAQMAYYV 125

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +   P+  G  GIY+  +   LGT +             +   +  Y   L         
Sbjct: 126 VHDTPLGGGTDGIYLMAKPVVLGTLLD------------LDKPMAFYGFTLACLTAVFGF 173

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L R+    A   IR N++   +   +    KL+AF +S    G+AG  FA     ++
Sbjct: 174 LTLLLRSRFGRALAGIRVNEQRMRATGFSTYPYKLAAFVISGGMAGLAGFLFAVKDGFVN 233

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P++  +  +  V+ ++ILGG+  L            + E                   F 
Sbjct: 234 PELISWHLSGEVLIMIILGGLGHLRGALIGAFAFALLQEFFKS---------EAIFGEFA 284

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                 + +++   + +    L+ 
Sbjct: 285 KHWHLGLGLSIIACVALLPRGLVG 308


>gi|309779705|ref|ZP_07674463.1| branched-chain amino acid ABC transporter, ATP binding protein
           [Ralstonia sp. 5_7_47FAA]
 gi|308921504|gb|EFP67143.1| branched-chain amino acid ABC transporter, ATP binding protein
           [Ralstonia sp. 5_7_47FAA]
          Length = 608

 Score = 97.6 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 113/299 (37%), Gaps = 15/299 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +     +++ + +    + ++  ++   I +Y + A GL ++ G  GL S        +G
Sbjct: 22  VLTALFVVVLVLIPIVPTPEFWITLLNYIGLYSLVALGLVLLTGVGGLTSFGQAAFVGLG 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYS   L ++YG+S W+ +    +I+     ++GL +++  G YL +AT+        + 
Sbjct: 82  AYSTAYLTTQYGVSPWIGLWAGLVITVVSAYVIGLITMRMSGHYLPLATIAWGLSLFFLF 141

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
              + +                     + I         +     M+Y++  +  ++   
Sbjct: 142 GNLEFL---------------GKYDGLNGIPVLNVLGKSLQTGREMFYLIWAVVVVAVLA 186

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  +    A R ++       ++     + K+  F  ++    ++G  +A  +  ++
Sbjct: 187 VQNLLNSRPGRAIRALKGGGTMAEAMGVNTAWMKVVIFVFAAVLACISGFLYAHLQRAVN 246

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P  F  +  I  + + ++GG+  +        +L  + +    +      S   F+   
Sbjct: 247 PTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGLLTILKDSLQSILPKLLGSNGNFEIIV 305


>gi|254479276|ref|ZP_05092618.1| putative amino acid or sugar ABC transport system, permease protein
           [Carboxydibrachium pacificum DSM 12653]
 gi|214034782|gb|EEB75514.1| putative amino acid or sugar ABC transport system, permease protein
           [Carboxydibrachium pacificum DSM 12653]
          Length = 319

 Score = 97.6 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 66/319 (20%), Positives = 136/319 (42%), Gaps = 29/319 (9%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           ++  LF         +  +    LIY + A GL++++G  G +SL      A+GAY+   
Sbjct: 1   MIAALFPPILNLPGSLQYLLDLSLIYAIVAIGLNLLMGYAGQISLGHGAFLAVGAYTSAY 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L     L  ++ + +S +++G  G+ +G+P+L+  G+YLAIATL        I   W   
Sbjct: 61  LTLNLHLPFFIALILSGLVTGIVGIFLGIPALRLEGNYLAIATLGFGIAVTQIFAIWTSF 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
           T G +GI       F                      +  YYV+L +  +   +   + R
Sbjct: 121 TGGFSGIRPPKPEIFGFKF---------------SSYLSYYYVILVVLIIVIILTQNIVR 165

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF-- 261
           T I  +   +RD++ A  ++   + + K  AF +S+ + G+AG+ +A     ++P  +  
Sbjct: 166 TKIGRSLMAMRDSEIAAKAMGINVSYYKTLAFGLSAFYTGIAGSLYAHLLGFMTPYDYAF 225

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
               ++  ++++++GGM ++S       I+  + +L   ++            S      
Sbjct: 226 SIGMSLNFLAMIVIGGMGTISGSIIGAIIMTWLPQLTSNLS------------SIKSLSQ 273

Query: 322 TLMVIALFLVILMRSHSLL 340
            +    +  V++   + + 
Sbjct: 274 IITGAIIIAVVMFYPNGIA 292


>gi|293607218|ref|ZP_06689559.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease [Achromobacter piechaudii ATCC
           43553]
 gi|292814310|gb|EFF73450.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease [Achromobacter piechaudii ATCC
           43553]
          Length = 543

 Score = 97.6 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 87/291 (29%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY   ++ + +   +   +    + +     ++       
Sbjct: 270 ITFGLMGVINMAHGELLMIGAYVTYVVQTLFRAWLPAWLDWYVVAALPLAFVVTALVGMA 329

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W        G+        +     S +         +
Sbjct: 330 LER--TVIRWLYGRPLETLLATWGISLMLMQGVRTLFGAQNVEVGNPSWMSGGITVLGGL 387

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+   + + L  T +    R I  N++    +        + AF +
Sbjct: 388 VLTYNRLVIIGFAFFVVFLVWVLLNHTRLGLFVRAITQNRRMADCVGVPTGRIDMLAFGL 447

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG   A S+             +    +V+LGG+  L+    A   L GV + 
Sbjct: 448 GSGIAGLAGV--ALSQLGNVGPDLGRGYIVDSFMVVVLGGVGQLAGTVIAALGLGGVNKF 505

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L +  R   L   R  S  
Sbjct: 506 LEPYAGAVMAK-------------ITILVLIVLFVQKRPQGLFAPRGRSVE 543


>gi|89902822|ref|YP_525293.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89347559|gb|ABD71762.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 345

 Score = 97.6 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 72/310 (23%), Positives = 127/310 (40%), Gaps = 17/310 (5%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +  Y   +   + I V  A GL+I+ G  GL+SL       +GAY+  IL  R G 
Sbjct: 36  FPFMASDYWLYLACLVSINVASATGLNILTGYTGLVSLGQAAFMGLGAYTVAILEIRVGS 95

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              L +     ++ A G+++G+PSL+ +G YLAIAT+  S I   +              
Sbjct: 96  PFLLNLLAGGFVAMAGGLVVGIPSLRVKGLYLAIATIAASFIAHFLFAN----------- 144

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                  F G T    +         +     +Y++++ +  L       L RT +  A+
Sbjct: 145 -----TAFTGRTAGLTLPPASLFGVVLDTSFRLYWIIVPVTLLMLLGAANLFRTRVGRAF 199

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             IRD   +   L   ++  KL +F +SS + G+AG  +A     ++P+ F  S +I  +
Sbjct: 200 IAIRDRDISAEVLGIALLRYKLLSFGLSSFYAGVAGGLWAYFFRVVTPESFPLSMSIFFL 259

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           + +I+GGM S+         +  V EL   +         +     +   T +  + +  
Sbjct: 260 AAIIVGGMGSILGGILGAIFMTMVPELLK-LAVGLLPGGSELTVFLSPVRTVVFGLLIIG 318

Query: 331 VILMRSHSLL 340
            ++   H L 
Sbjct: 319 FLVFEPHGLA 328


>gi|83746319|ref|ZP_00943372.1| amide-urea transport system permease protein [Ralstonia
           solanacearum UW551]
 gi|207742757|ref|YP_002259149.1| permease transporter protein [Ralstonia solanacearum IPO1609]
 gi|83727069|gb|EAP74194.1| amide-urea transport system permease protein [Ralstonia
           solanacearum UW551]
 gi|206594151|emb|CAQ61078.1| permease transporter protein [Ralstonia solanacearum IPO1609]
          Length = 556

 Score = 97.6 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ + +              +     +        
Sbjct: 282 ITYGLIGVINMAHGEFLMIGAYATYVVQTIFRNHFPNAFDWYLPAALPAAFLAAAFVGFA 341

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                ++   +     + +L  +         +        +     S +         +
Sbjct: 342 LER--SVLRHLYGRPLETLLATFGVSLLLMQAVRSLFGAQNVEVANPSWMSGGIALYPGL 399

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     + A     L RT +    R    N+     +          AFA 
Sbjct: 400 ILPTNRLVILAFALVVVAMAWAVLNRTRLGLFVRATTQNRTMAACVGVRTWKVDSYAFAF 459

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  L+        L  + + 
Sbjct: 460 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTIIGAFGLGLINKF 517

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   L  L+  S  
Sbjct: 518 IEPFYGAVLAK-------------IFVLVLIVLFIQKRPQGLFALKGRSAE 555


>gi|326318179|ref|YP_004235851.1| urea ABC transporter permease UrtB [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323375015|gb|ADX47284.1| urea ABC transporter, permease protein UrtB [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 526

 Score = 97.6 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 87/296 (29%), Gaps = 17/296 (5%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       IGAY+  ++   +   +        + +     +  
Sbjct: 247 VALGLAITYGLMGVINMAHGELMMIGAYATYVVQGLFQKYLPGAFDWYLVAAVPVAFLAS 306

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       +   +     + +L  W      +  +        +G    + +    
Sbjct: 307 ALMGAVLER--GVIRFLYGRPLETLLATWGISLVLQQLVRSLFGAQNVGVENPAWMSGGV 364

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                +        ++     +   +   + RT +    R +  N+     +        
Sbjct: 365 QVLENLQLPWNRLVIVAFAFAVLGGVAFLIGRTRLGLFVRGVTQNRPIASCMGVNTARVD 424

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
             AFA+ S   G+AG   A S+             +    +V+LGG+  L+    A   L
Sbjct: 425 TYAFALGSGIAGLAGC--ALSQVGNVGPDLGQGYIVDSFMVVVLGGVGQLAGTVYAALGL 482

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
             + +                           +++ + + I  R   +  ++  + 
Sbjct: 483 GVLNKFLESWTGAVLAK-------------IAVLVLIIVFIQKRPQGIFAVKGRTA 525


>gi|39936730|ref|NP_949006.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009]
 gi|39650586|emb|CAE29109.1| putative ABC transporter system permease component, possible fused
           protein [Rhodopseudomonas palustris CGA009]
          Length = 537

 Score = 97.6 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 90/297 (30%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++          L   S +I+     ++ 
Sbjct: 258 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQEAIRTRYPALFDYSLLIAVPLAFLVA 317

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       +   +     + +L  W      +  +              S      
Sbjct: 318 GAVGVLIER--TVIRFLYGRPLETLLATWGLSLILQQAVRTLFGPTNREVGNPSW-MSGA 374

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++L     + A ++  LR T++    R +  N++   S+        
Sbjct: 375 FELGEMTITYNRLWILCFTLAVFALLLAMLRYTSLGLEMRAVTQNRRMAASMGIATSRVD 434

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   A S+          S  I    +V+ GG+ +L         L
Sbjct: 435 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFSL 492

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +    +                      +++ + L I  R   L  L+  +  
Sbjct: 493 GIANKFLEPVAGAVLGK-------------IAILVLIILFIQKRPRGLFALKGRAVE 536


>gi|260459978|ref|ZP_05808231.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259034189|gb|EEW35447.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 326

 Score = 97.6 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 67/320 (20%), Positives = 132/320 (41%), Gaps = 22/320 (6%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------YG 89
           Y        LI+ +   GL++  G  GL ++      AIGAY+  +L +         +G
Sbjct: 6   YGAFFLTTALIFSLITLGLNLQWGLTGLFNVGLAGFVAIGAYTSALLTTPDDAARLGGFG 65

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L I +    + ++ G    + G+ +L+ R DYLAI T  ++ + Q + +  + +T G  G
Sbjct: 66  LPILVGWAGAMVVGGIAAALTGMATLRLRSDYLAITTFGVAVVVQLVALNAQKLTGGPFG 125

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           I    R             F     + +++ +    V+  +  ++   +  L R+     
Sbjct: 126 IGFIPRP------------FGSLAETPLLFNLSNLAVVAAVTLIAYLALEHLSRSPWGRV 173

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            + +R++++A  SL  +  F ++ AFAV  A + +AGA  A     I+PD +       V
Sbjct: 174 LKALREDERAAISLGKSARFYRVQAFAVGGAIMALAGALQAHFTGFIAPDNYLPILTFQV 233

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             ++I+GG  S       + ++ G+      +    F    +            + + L 
Sbjct: 234 WVMLIVGGSGSNLGAVIGSILVWGIWAGSGTLTSVLFPPEQQ--ARAASLQIAAIGVMLC 291

Query: 330 LVILMRSHSLLRLRTPSNFL 349
           +++L+R + LL  R      
Sbjct: 292 VILLIRPNGLLGDRPRRLRF 311


>gi|166363361|ref|YP_001655634.1| urea transport system permease protein [Microcystis aeruginosa
           NIES-843]
 gi|166085734|dbj|BAG00442.1| urea transport system permease protein [Microcystis aeruginosa
           NIES-843]
          Length = 384

 Score = 97.6 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 50/346 (14%), Positives = 106/346 (30%), Gaps = 28/346 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   I  +  +V  +++F  L       +   +  + L   + A G+ ++ G  GLLSL 
Sbjct: 16  KKKLITEIAVIVGLVVIFAVLLPLALSAFRLRLLGRFLSLAIVALGIDLIWGYTGLLSLG 75

Query: 70  CVIAYAIGAYSYVIL--------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
             I +A+G Y+  +                      +  +      +      ++ +P++
Sbjct: 76  HGIFFALGGYALAMYLNLQLPPGQMPEFFTLYGVTELPFIWQPFYSLPLTILALIIVPAI 135

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                   I    +  ++ +IL +   +            +             F     
Sbjct: 136 VAGLLGYLIFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDTQTIFGLLVG 195

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
               ++  Y + +        +  WL           IRD++           + K+  F
Sbjct: 196 SDAVQVAFYLLTIVCLLAIYLLCRWLTTGRFGRLLVAIRDDEVRVRFSGYDPTWFKVLVF 255

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
           A+S A  G+AGA +      I+P+    + +I ++  V +GG  +L      T ++    
Sbjct: 256 AISGAIAGVAGALYTVQTGIITPNSMDVAFSIEMVIWVAVGGRATLVGAVVGTLLVRLAQ 315

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                               F             +V+ +    LL 
Sbjct: 316 TFLSE--------------QFPEVWVFFQGALFLIVVTVLPDGLLG 347


>gi|149187787|ref|ZP_01866083.1| ABC transporter, membrane spanning protein (ribose) [Vibrio
           shilonii AK1]
 gi|148838183|gb|EDL55124.1| ABC transporter, membrane spanning protein (ribose) [Vibrio
           shilonii AK1]
          Length = 662

 Score = 97.6 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 53/316 (16%), Positives = 109/316 (34%), Gaps = 13/316 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L K   +  L A++    +        S     ++G+Q     +   G+ + +   G + 
Sbjct: 9   LQKLASLGGLFALIIAFSI--TSPHFFSMDNAMTVGLQTSTITIIGIGVMLTI-LTGGID 65

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+   +  +     G+ + + + V  +    CG+I GL   K R      ATL
Sbjct: 66  LSIGSVMALSGVTAAM-AVNAGMPVPVGMAVGVLTGAFCGLISGLCVSKLRLPPFI-ATL 123

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            M  + + + +    ITN      + +   +LG      +         +I    + Y +
Sbjct: 124 GMMMMARGVAL---YITNAAPVSGMPESFSYLGNGALFRMVEIGENGFPIIKFAGIPYPV 180

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L M  + A+    L +  +      I  N++A           K +A+  S    G+AG 
Sbjct: 181 LVMLLVVAAFSFLLTKMRLGRYLYAIGSNEEAARLSGIDTQKVKTAAYVASGFLAGLAGV 240

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
             A+      P+    +E   + S V+     +GG+ ++      + I+  +        
Sbjct: 241 IIASRLVTAQPNGSVMAELDAIASAVVGGTSLMGGVGTVFGAVVGSFIIGVLRNGLNMNG 300

Query: 303 FYYFNSLLKFDCSFNM 318
             +F   +        
Sbjct: 301 VSFFVQQIVIGGVIIA 316


>gi|94310173|ref|YP_583383.1| inner-membrane translocator [Cupriavidus metallidurans CH34]
 gi|93354025|gb|ABF08114.1| putative branched-chain amino acid ABC transporter, permease
           protein [Cupriavidus metallidurans CH34]
          Length = 354

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 71/337 (21%), Positives = 136/337 (40%), Gaps = 26/337 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R   +      L  +  L     L    S KY   +  +++I  +FA  L +++G  GL
Sbjct: 13  IRRPAWMATAGWLVALAVLCAMPMLLTADSHKYYIELLSKVMIMAIFALSLQLLIGYTGL 72

Query: 66  LSLNCVIAYAIGAYSYVILG-SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           +SL     +A+ AY+  +L       + WLL+  +   + A  +++G   L+ RG Y  +
Sbjct: 73  VSLGHAAYFAMAAYATAMLAPESGPGNGWLLLFGAVGAAAALALVVGALVLRTRGIYFIM 132

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL  +++   +      I  G  G Y+  R  F           F      V   +  Y
Sbjct: 133 VTLAFAQMVYFVFHD-TKIAGGSDGTYIYFRPEFG---------LFSARPVTVNDPVQFY 182

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           +++L    L+ + +  L R+   +A   IR N++   +        +L AF V  AF G+
Sbjct: 183 WLVLVALALTVAALTLLLRSRFGHALVGIRHNEQRMRAAGFGTYRYQLGAFVVGGAFAGL 242

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG  +A     ++P++  + ++   + +VILGG+ SL+         + + E    +  +
Sbjct: 243 AGYLYAIQFGFVNPEIASWHQSGNAMLMVILGGVGSLAGAVLGAFSFVLLAEWFGTLTKH 302

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +                 LM   + L + +    L+ 
Sbjct: 303 W---------------QLLMGGFIILAVALLPRGLVS 324


>gi|139437971|ref|ZP_01771524.1| Hypothetical protein COLAER_00511 [Collinsella aerofaciens ATCC
           25986]
 gi|133776168|gb|EBA39988.1| Hypothetical protein COLAER_00511 [Collinsella aerofaciens ATCC
           25986]
          Length = 359

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 76/346 (21%), Positives = 145/346 (41%), Gaps = 27/346 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M     +  ++D +   + VV   ++F         + I    + I  Y++ A  L++VV
Sbjct: 1   MKFLKDKQTRHDFVTYAMCVVAFAIVFFMQSNHMIPRMIAGQLVPITAYIVMAISLNLVV 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY-------GLSIWLLIPVSAMISGACGMIMGLP 113
           G  G LSL      ++GAY+ ++             + + + I V A+ +   G ++G+P
Sbjct: 61  GIAGDLSLGHAGFMSVGAYTGIVTAVALESTVPSDPMRLIISIVVGAIAAAILGFLIGIP 120

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD-----RLYFLGTTVRSLIR 168
            L+  GDYLAI TL   EI + ++       + +    + +      +  L         
Sbjct: 121 VLRLSGDYLAIVTLAFGEIIKEVVTCLIVGVDSRGLHVIFNITGNSTIDDLHLLEDGTAI 180

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                 +  +     +     +  ++  I+L L R+    A   +RDN+ A  S+  ++ 
Sbjct: 181 IKGAQGASGVSTYSTFLAGAILVMVALVIVLNLVRSRTGRAIIAVRDNKIAAESVGISVT 240

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
             ++ AF VS+A  G AGA F  +  ++S   F F+ +I+++  V+LGG+ ++     A 
Sbjct: 241 QYRMIAFVVSAALAGAAGALFGGNFSQLSATKFDFNTSILILVFVVLGGLGNMRGSVIAA 300

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           A+L  + EL    + Y                  +  I L LV++ 
Sbjct: 301 ALLTVLPELLRQFSDY---------------RMLIYAIVLILVMVF 331


>gi|159027922|emb|CAO87084.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 384

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 49/346 (14%), Positives = 107/346 (30%), Gaps = 28/346 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   I  +  +V  +++F  L       +   +  + L + + A G+ ++ G  GLLSL 
Sbjct: 16  KKKLITEIAVIVGLVVIFAVLLPLALSAFRLRLLGRFLSFAIVALGIDLIWGYTGLLSLG 75

Query: 70  CVIAYAIGAYSYVIL--------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
             I +A+G Y+  +                      +  +      +      ++ +P++
Sbjct: 76  HGIFFALGGYALAMYLNLQLPPGQMPEFFTLYGVTELPFIWQPFYSLPLTILALIIVPAI 135

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                   I    +  ++ +IL +   +            +             F     
Sbjct: 136 VAGLLGYLIFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDTQTIFGLLVG 195

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
               ++  Y + +        +  WL           IRD++           + K+  F
Sbjct: 196 SDAVQVAFYLLTIVCLLAIYLLCRWLTTGRFGRLLVAIRDDEVRVRFSGYDPTWFKVLVF 255

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
           A+S A  G+AGA +      I+P+    + +I ++  V +GG  +L      T ++    
Sbjct: 256 AISGAIAGVAGALYTVQTGIITPNSMDVAFSIEMVIWVAVGGRATLVGAVIGTLLVRMAQ 315

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                               F             +V+ +    +L 
Sbjct: 316 TFLSE--------------QFPEVWVFFQGSLFLIVVTVLPDGILG 347


>gi|152981502|ref|YP_001352470.1| ABC-type branched-chain amino acid transport system, permease
           component [Janthinobacterium sp. Marseille]
 gi|151281579|gb|ABR89989.1| ABC-type branched-chain amino acid transport system, permease
           component [Janthinobacterium sp. Marseille]
          Length = 346

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 57/338 (16%), Positives = 130/338 (38%), Gaps = 36/338 (10%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +  +  +L    L       Y+ S+   + I+V+ A  L++++G  G LSL  V  + +G
Sbjct: 5   ITFLVSVLALALLPLIWPDPYLLSVVASVGIFVIAAISLNLLLGYTGQLSLGHVAFFGLG 64

Query: 78  AYSYVILGSRYG--------------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           AY+  +L   +                 +W+        +   G ++G  + + RG Y  
Sbjct: 65  AYTTSLLSLGFDVTLWGMTEPLVVTAKPVWVSFACGIAFAAIAGWLLGKLAFRVRGAYFV 124

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           I T+  +++ + + + W  +T G   +     L                    +  ++  
Sbjct: 125 IVTISFAQVMRMVSLNWVDLTEGPMALNNIPALTM---------WVPGEGVIDLASKLST 175

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           Y+++L +  +S  ++  +  + I  A   +R+N+    S+   +      A   ++   G
Sbjct: 176 YWLVLAVAVVSYLLVAAIVHSRIGRAMIALRENETLARSVGIRVTHYLGIATIFAAGIAG 235

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
            AG  +A +   I PD+F F   I+++ +VI+GG  +L+       +   + E+  G+  
Sbjct: 236 AAGGLYAHTVRIIDPDVFMFMFTIMMVIMVIVGGKGTLAGPVVGGLLFGLLPEVLRGVVS 295

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                              +  + +  V++     ++ 
Sbjct: 296 -------------PEIQWMIYGVLMIAVLVFMPKGVVP 320


>gi|307132621|ref|YP_003884637.1| branched-chain amino-acid ABC transporter permease [Dickeya
           dadantii 3937]
 gi|306530150|gb|ADN00081.1| branched-chain amino-acid ABC transporter permease [Dickeya
           dadantii 3937]
          Length = 347

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 73/335 (21%), Positives = 122/335 (36%), Gaps = 44/335 (13%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL----------- 84
             YI  +   I I+++ A   +++ G  G LSL      AIGAY   +L           
Sbjct: 33  NDYIVRIFCNIFIFMILAVSYNLINGVTGQLSLEPNGFVAIGAYITALLLLSADAKTNMF 92

Query: 85  --------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                         S    + +S + + A  + +  P  + RGDYLAI TL    I +  
Sbjct: 93  EMTAPSPLILAVHASFLPALIISGVCAAAVAVCLSFPVFRVRGDYLAIVTLGFGFIIKIF 152

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            I     TNG  G+    ++                          + Y    +   +  
Sbjct: 153 AINNPQFTNGAIGLNEIPQVSH------------------------ILYWCGFIALAAVL 188

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            IL L  +    A + +RD++ A  ++       K  AFA S+ F G+ G   A+    I
Sbjct: 189 FILQLVYSKYGRAMKAVRDDEDAAIAMGINTFRVKTCAFATSAFFEGIGGGLLASLLTII 248

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SPD+F F     ++ I++LGG+ S +     T I+IG  E    ++              
Sbjct: 249 SPDLFDFMLTFQLLIIIVLGGLGSTTGAILGTIIVIGSGEWLRFLDQPLTLFGQDLGAH- 307

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 +  + L +++L     LL  +   +   R
Sbjct: 308 PGLRMVVFSLVLLVIMLFAREGLLGKQEVWDIRRR 342


>gi|297162877|gb|ADI12589.1| inner-membrane translocator [Streptomyces bingchenggensis BCW-1]
          Length = 605

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 63/339 (18%), Positives = 129/339 (38%), Gaps = 36/339 (10%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            +RL  +  +  +        +   +    +  Y  + G Q+LI+ + A  L++V GS  
Sbjct: 302 PIRLRWWQALALIG-------VAAGVVPWVADDYQLTTGTQVLIFAILALSLTLVSGSAA 354

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            +SL      A+GAY+  +L   +G      +  + + +   G ++  P+ +  G Y++I
Sbjct: 355 QISLGQAGPMAVGAYTSALLVGEHGWPFLAGLFAAGLAAAVVGTVLMSPTWRLSGHYVSI 414

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           ATL +  +    ++    +T+G  GI         G                +I     Y
Sbjct: 415 ATLGIGAVTVAAILNLDWLTHGPLGITAIPPPSLFGHQ--------------IITPTETY 460

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            + L +  ++  +++ L+++ +   W  +  ++ A  +        K  A+AV +   G+
Sbjct: 461 LLDLTVLLVALGLVVRLQKSFLGTVWSAVGADETALGASGLRPADYKALAYAVGAFVAGL 520

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG+  A     + P MF    +++ ++I++LGGM S         +L+G  E+       
Sbjct: 521 AGSLLAHQYSYLDPTMFSPELSMLALTIIVLGGMNSPFGAVLGAVVLVGAPEVLRMAQDA 580

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
              +                       I  R   L   R
Sbjct: 581 RLLTYGVLLLLL---------------IRFRPQGLWARR 604



 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 91/294 (30%), Gaps = 25/294 (8%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
            Y + A GLS++ G   +++      +A G  S   L +     +W  I      +   G
Sbjct: 14  TYALVAIGLSLIFGVSNVVNFAQGSVFAAGTMSGWWLIAEQHWPLWAAIAGVCAFTAVLG 73

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           + + L +++       IA L+ +     +L     +  G         L  L   V    
Sbjct: 74  LAVNLLAVQPLAKVPPIAALLATYAVSVVLDNLSQVVFGPDTRRFPQALDTLNFHVGGFR 133

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                      +      +          +  +L+ T    A R    +  A   +   +
Sbjct: 134 -----------FGTLDVVMFAVSVGCILLLGGFLKFTKYGQAIRATAQDSDAALQMGVPV 182

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
              +  +F ++SA  G+AG         ISP     +  +   +   LGG+ SL      
Sbjct: 183 GRVRNLSFMLASALGGLAGVLVGMYNSNISPSS-GTAAGLTAFTAATLGGLGSLPGAVLG 241

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              L  V            ++              ++   L LV+ +R   LL 
Sbjct: 242 GLALGIVEAFGISYWGAGVDN-------------LIIFGVLLLVLWLRPGGLLG 282


>gi|86137311|ref|ZP_01055888.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85825646|gb|EAQ45844.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 390

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 60/359 (16%), Positives = 126/359 (35%), Gaps = 32/359 (8%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           ++ +L +  P +L  F   +   ++      +  + +I+ +FA G +I+ G  G LS   
Sbjct: 4   VVAVLTLCAPFILNPFPTDSAMAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYLSFGH 63

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +G+YS V +     +++   I +S +ISG   +++G  SL+  G Y +I TL  +
Sbjct: 64  AAFLGVGSYSAVWMFKLLSMNVVPAIMLSVVISGLFALLIGFVSLRRSGIYFSILTLAFA 123

Query: 131 EIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
           ++  N+                     P   G +              +     F     
Sbjct: 124 QMSFNLAYSVLTPITNGETGLQLTLEDPRVLGVSATADGSIPVTNLFGMEMRSTFEMVVG 183

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
            +       YY+   +   +  + + + R+      R ++ NQ+             L+A
Sbjct: 184 PWAFQFNAGYYLCALILLAAFYLSIRIFRSPFGMMLRAVKSNQQRMNYTGLNTKPYTLAA 243

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F +S  + G+AG   A+       +  +++ +  V+ + ILGG  +L         +   
Sbjct: 244 FVISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLGAGFIKYF 303

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLM-------------VIALFLVILMRSHSLL 340
             +   +N    +    F           +              I   LV++     L+
Sbjct: 304 ENIFSKINDNVLHGWFSFMPDGLEDFVVFIIHPFIGKGWHLTLGILFMLVVVFLPGGLV 362


>gi|121603713|ref|YP_981042.1| ABC transporter-like protein [Polaromonas naphthalenivorans CJ2]
 gi|120592682|gb|ABM36121.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
           / amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Polaromonas naphthalenivorans CJ2]
          Length = 588

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 117/334 (35%), Gaps = 28/334 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L +   +  L+ V+  + +           +  +    I +Y +   GL ++ G  GL S
Sbjct: 2   LARRYGLWALIVVLVGVAVLPL------PDFWITQLNYIGLYSLVCLGLVLLTGVAGLTS 55

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                   IGAYS   L    GLS WL + +   ++ AC +I+ L +L+  G YL +AT+
Sbjct: 56  FGQAAFVGIGAYSTAWLTLNTGLSPWLTLFIGLGLTAACALILALLTLRMSGHYLPLATM 115

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                   ++     +                       I+        V      + + 
Sbjct: 116 AWGLSLYYLMGNLDAL---------------GKYDGLLGIQGLTLLGWEVGQGRGFFALT 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  L+A  I+ L  +    A R++R       ++  + +  K+  F +++    ++G 
Sbjct: 161 WTIVVLAALAIVQLLDSRAGRAMRSLRSGTLMAEAMGVSTLRYKIIIFLIAALLASLSGW 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            FA  +  ++P  F     I  + + ++GG+  +        +   + +    +   +  
Sbjct: 221 LFAHFQRTVNPSPFGLKMGIEYLFMTVVGGVGHVWGALTGALLTKLLEDQLQVLLPQWLG 280

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +              +  I L L++      L  
Sbjct: 281 T-------SGSYEIIVFGIVLVLMLKFLPDGLWS 307


>gi|209884043|ref|YP_002287900.1| ABC transporter related [Oligotropha carboxidovorans OM5]
 gi|209872239|gb|ACI92035.1| ABC transporter related [Oligotropha carboxidovorans OM5]
          Length = 613

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 57/333 (17%), Positives = 117/333 (35%), Gaps = 24/333 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K    L        L+L  F+       +  +   +IL++ +F  G  I+ G  GLLS  
Sbjct: 3   KQRPYLVETLTAIGLILAPFILPHLG--FAPNTVNRILVWGLFGIGFDILFGFTGLLSFG 60

Query: 70  CVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
               Y  G +    +L       +   + +  + + A G ++GL +L+  G Y A+ T+ 
Sbjct: 61  QSALYGTGGFVAAYLLTIAGFPHVVTALFIGMIAAAAVGYLVGLIALRSTGIYFAMITVA 120

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           ++E+F  +         G                  +L     +          +Y  L 
Sbjct: 121 IAEVFFFVEFNPLSEWTGGENGLPGVPSPSFDLGFTTLHFTSGWS---------LYGFLA 171

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
              F+     L + R+ +    R IRDN     ++   +   KL+AF +++A+ G AG  
Sbjct: 172 FWYFIGIVAALRIVRSPVGAVLRAIRDNPLRAVAVGHNVHGYKLTAFVIAAAYAGFAGGL 231

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
               +  + PD F F  +  ++ +  +GG  +L        + + + +            
Sbjct: 232 LGVMQAFMPPDAFMFHTSAELVMMTAIGGTGTLFGPLLGAGVWLFLQDFLQA-------- 283

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                         ++ +   L++      ++ 
Sbjct: 284 ----ALGLGAAWKLVLGVIFVLLVCFLRRGIIG 312


>gi|152968876|ref|YP_001333985.1| high-affinity branched-chain amino acid transport [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238893284|ref|YP_002918018.1| ABC transport system permease component [Klebsiella pneumoniae
           NTUH-K2044]
 gi|262042362|ref|ZP_06015524.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|150953725|gb|ABR75755.1| high-affinity branched-chain amino acid transport [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238545600|dbj|BAH61951.1| ABC transport system permease component [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
 gi|259040270|gb|EEW41379.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 349

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 127/353 (35%), Gaps = 44/353 (12%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L ++   +  L         YI  +   I I+++ A   +++ G  G LSL      A+G
Sbjct: 15  LVIIVICIALLAGINVVFNDYIVRVISTIFIFMILAVSYNLINGVTGQLSLEPNGFVAVG 74

Query: 78  AYSYVI-------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           AY   +                               + +S + + A  + + +P  + R
Sbjct: 75  AYVTALLILSSDSKVDMFEMAAPSPWILSLHAGFLPALLISGLCAAALAVCLAVPVFRVR 134

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           GDYLAI TL    I + + I    ITNG  G+    +                       
Sbjct: 135 GDYLAIVTLGFGFIIKILAINNPQITNGAIGLNDIPQQPH-------------------- 174

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
               + +       L+  +IL L  +      + IRD++ A  ++       K  AFA S
Sbjct: 175 ----LLFWCGLFALLATGMILQLVWSKYGRMMKAIRDDEDAAIAMGVNTFRIKTCAFATS 230

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           + F G+ G   A+    ISP +F F     ++ I++LGG+ S +     T +++G  E  
Sbjct: 231 AFFEGIGGGLLASLLTTISPGLFDFMLTFQLLIIIVLGGLGSTTGALLGTVLVVGSGEWL 290

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             ++            ++      +  + L +++L     LL  +       R
Sbjct: 291 RFLDQPLQFFGHDLG-AYPGLRMVVFSLLLLIIMLFAREGLLGKKEIWQTGRR 342


>gi|299536150|ref|ZP_07049464.1| ABC transporter permease protein [Lysinibacillus fusiformis ZC1]
 gi|298728425|gb|EFI68986.1| ABC transporter permease protein [Lysinibacillus fusiformis ZC1]
          Length = 338

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 56/327 (17%), Positives = 120/327 (36%), Gaps = 31/327 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
            A    L++F+ L      + +  +  QI I+ + A    I++G  G++S    + + IG
Sbjct: 10  FAFFLLLVIFIILPFVNDSRTLLILLTQIFIFGILAMSYDILLGYTGIVSFGHAMFFGIG 69

Query: 78  AYSYVILGSRYGL---SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AY+  ++  +         L I +  +++G    ++GL +L+ +  + A+ TL  S +F 
Sbjct: 70  AYTTAVMLKQMDHTLLIFVLSIVIGMVLAGFISFLVGLLTLRLKSHFFAMLTLAFSGLFL 129

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  KW+ +T G  G        F                         Y+ +L    + 
Sbjct: 130 VLAEKWRSVTYGNDGFTFRAPDLFRDRM-------------------TFYFFVLASLVVI 170

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +     +        +R+N++   SL    +  K+ A  V+      AG+ +A S  
Sbjct: 171 FLALYRFVNSPTGRILIAVRENEQRTKSLGFNTLHYKVIASVVAGIVASFAGSLYAVSLR 230

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++  +      +  + + I+GG+ +L      +A++        G+           D 
Sbjct: 231 FVNTSVMAMDITLDALLMTIIGGVGTLVGPLLGSAVIEYAQHALSGLAR---------DY 281

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
               R      I   L ++     ++ 
Sbjct: 282 PIFERWIIFFGILYILAVIFFPKGIIG 308


>gi|301061441|ref|ZP_07202211.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
 gi|300444480|gb|EFK08475.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
          Length = 366

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 59/339 (17%), Positives = 125/339 (36%), Gaps = 13/339 (3%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L LFL +        I  + +QI+I+        I++G  G+LS    + + +GAY 
Sbjct: 28  ICLLALFLLVPFLFPSFKIVDLAVQIIIFGTLVASFDILLGYTGILSFGHGMFFGMGAYC 87

Query: 81  YVILGSRYGL----SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                 +YG+    ++ L    +A+ +G   +++ L +L+ +  + A+ TL ++E+   +
Sbjct: 88  MAFFMGKYGMPSYTNLVLGFAAAAVFAGIVALLISLLTLRVKAIFFAMITLAIAELAIVL 147

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
             K   +T G+ GI                     F    +  +   YY +   C +   
Sbjct: 148 ATKLSGLTGGEDGISFMSP-----GIFSVAFSLGDFMGIDINGKTITYYFIFFSCTVLFL 202

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +L    + +    + IRDN +   +L       +  +         + G  +A   + +
Sbjct: 203 AMLRFTHSPLGRVLQAIRDNSQRAEALGNRTFVYQSISITFGCIMAALIGGLYALWMEYV 262

Query: 257 SPDMF--KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           +P+      +  + V+ +VI+GGM +L       A L         +     +       
Sbjct: 263 NPESSLGVMTIMLDVLLMVIIGGMGTLYGGIIGAAFLKITQTFLPDLQHLAKDLFPNALL 322

Query: 315 SFNMR--HTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             N+      L  +   LV++     ++         +R
Sbjct: 323 LHNILERWLLLFGVLFILVVIFFPKGVIGSIRERTARKR 361


>gi|261405484|ref|YP_003241725.1| urea ABC transporter permease UrtC [Paenibacillus sp. Y412MC10]
 gi|261281947|gb|ACX63918.1| urea ABC transporter, permease protein UrtC [Paenibacillus sp.
           Y412MC10]
          Length = 362

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 47/333 (14%), Positives = 94/333 (28%), Gaps = 27/333 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            +LL + L    +  +   +  + L   + A GL ++ G  G+LSL   + + +GAY+  
Sbjct: 21  AVLLLMCLAPLFTTPFRLGLLTKFLALAILAVGLDLIWGYGGILSLGHGVFFGLGAYAMA 80

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLP-------------SLKFRGDYLAIATLIM 129
           +          L   +      +                                     
Sbjct: 81  MYLKLDASGSALPDFMGWSGVASLPWFWEPFRSFPAALILGMLLPALLALILGFFTFRNR 140

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                  ++    +                   +        F  +    +I +Y++ L 
Sbjct: 141 IVGVYFTILTQALVMIVVTLFVGKQEWTGGTNGLTGYSSILGFNLNAPSTKIGLYFITLA 200

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
               +  +   +  + +       RD +     L       K  AFAVS    G+AG  F
Sbjct: 201 ALAGAYILCRRIVNSRVGQVLEASRDGENRVRFLGFDPSRYKTFAFAVSGGLAGLAGMLF 260

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                 ISP M     +I ++  V LGG  +L        +L                + 
Sbjct: 261 VLQVGIISPSMMGIVPSIEMVLWVALGGRGTLIGAIIGAVLL--------------NAAK 306

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                ++      ++     +V+++    L  L
Sbjct: 307 TGISEAYPEGWLLVLGALFVIVVVLMPKGLTGL 339


>gi|298291375|ref|YP_003693314.1| urea ABC transporter permease UrtC [Starkeya novella DSM 506]
 gi|296927886|gb|ADH88695.1| urea ABC transporter, permease protein UrtC [Starkeya novella DSM
           506]
          Length = 388

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 54/353 (15%), Positives = 105/353 (29%), Gaps = 34/353 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLG--ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           +  +L   AV+ P+L        A     Y+ S+  + L Y + A  + ++ G +G+LSL
Sbjct: 19  FLGVLLAAAVLVPVLNLATSPESAVHVPTYVVSLLGKYLTYALLALSVDLIWGYVGILSL 78

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                +A+G Y+  +   R   +  +                 LP   +  D    A ++
Sbjct: 79  GHGAFFALGGYAMGMYLMRQIGTRGVYGDPVLPDFMVFLNWKELPWFWYGFDLFPFAAIM 138

Query: 129 MSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRF 169
           +      + + +                             +  D  +     +      
Sbjct: 139 VLLAPGILALVFGWFAFRSRVTGVYLSIITQAMTFALLLAFFRNDMGFGGNNGLTDFKDI 198

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
             F          ++ +      L   +  +L R+        IRD +            
Sbjct: 199 LGFNIQSDGTRAVLFVLSALALGLGYVLCRFLVRSHFGKVLIAIRDAETRVRFTGYRAEN 258

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            KL AF VS+   G+AGA +      I+P  F  + +I +I  V +GG  +L   A    
Sbjct: 259 YKLVAFVVSAMLAGIAGALYVPQVGIINPSEFSPANSIEIIVWVAVGGRGTLVGAALGAV 318

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           ++                               ++      V L     ++  
Sbjct: 319 LVNYAKTYFTS-------------GFLAPYWLFMLGGLFVAVTLFLPKGIVGT 358


>gi|261855701|ref|YP_003262984.1| urea ABC transporter permease [Halothiobacillus neapolitanus c2]
 gi|261836170|gb|ACX95937.1| urea ABC transporter, permease protein UrtC [Halothiobacillus
           neapolitanus c2]
          Length = 383

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 52/350 (14%), Positives = 98/350 (28%), Gaps = 33/350 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L LL V    L            Y  ++  + L Y + A  + ++ G  G+LSL   
Sbjct: 20  AIVLMLLWVSIGNLAVPASSPWHVSTYTVTILGKFLTYALLAVSIDLIWGYAGILSLGHG 79

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM-- 129
             +A+G Y+  +   R                        LP   +  D+   A L++  
Sbjct: 80  AFFALGGYAMGMYLMREIGDRGQYGNPDLPDFMVFLNWHELPWYWYGFDHFWFAALMVLL 139

Query: 130 -----------------SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
                                   +I            +  +  +     +        F
Sbjct: 140 VPGILAGLFGWLAFRSKVSGVYFAIITQALTYALMLAFFRNEMGFGGNNGLTDFKDILGF 199

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
           P +     + ++        L   I   + R+        IRD +    +    +   KL
Sbjct: 200 PIAENGTRVGLFVASGIALILGYFIAQAIVRSRFGRVLVAIRDAEPRTRACGYPVARYKL 259

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             F +S+    +AGA +      I+P  F    +I  ++ V  GG  SL         + 
Sbjct: 260 VVFVISAMLAAVAGALYVPQVGIINPGEFSPLSSIEAVAWVATGGRGSLFGPIIGAFAVN 319

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   +    +                ++     LV +     L+ L
Sbjct: 320 YSKTQLTSLAPDLWP--------------FVLGGLFILVTVFLPKGLISL 355


>gi|160896604|ref|YP_001562186.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160362188|gb|ABX33801.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 354

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 78/327 (23%), Positives = 133/327 (40%), Gaps = 17/327 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             V    + FL +  + S     ++ I  LI  + A GL+I+VG  G +SL      A+G
Sbjct: 28  AIVALLAVAFLVIPFSVSDYTFQAVLIPFLIMSLAALGLNILVGYCGQISLGTGAFMAVG 87

Query: 78  AYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           AY+   L  R+     L  +    +++   G+I GLPSL+ RG YLA+ATL        +
Sbjct: 88  AYAAYNLQVRFEGMPLLVALIGGGVLAMVFGVIFGLPSLRIRGLYLAVATLAAQFFVDWL 147

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
             +   +TN  +   V+     +                        Y + LG+  +   
Sbjct: 148 ASRAAWVTNNSSSGSVSAGPLSIMGWKIDTPMEK-------------YLLCLGILCVLGL 194

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDR 255
               L R AI   W  +RD   A   +     +AKLSAFAVSS  +G+AGA +       
Sbjct: 195 AAKNLVRGAIGREWMAMRDMDVAASVIGIRPTYAKLSAFAVSSFIVGVAGALWGFVHLGA 254

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
             P  F    ++ ++ ++I+GG+ S+       A  + +  L   +   ++  L     +
Sbjct: 255 WEPAAFSLDRSLQLLFMIIIGGLGSVVGSIFGAAFFVLLPLLLTQV--PHWMGLPLSTAT 312

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                  +    +   +++  H L +L
Sbjct: 313 ATYLEHMIFGALIVFFLIVEPHGLAKL 339


>gi|169334652|ref|ZP_02861845.1| hypothetical protein ANASTE_01055 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257390|gb|EDS71356.1| hypothetical protein ANASTE_01055 [Anaerofustis stercorihominis DSM
           17244]
          Length = 335

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 68/323 (21%), Positives = 137/323 (42%), Gaps = 42/323 (13%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L+ +   +++ L +       + +++ +++ I ++   GL+++ G  G  SL      A
Sbjct: 22  LLIFIAAYVIIKLLIVVGIISPFYETVVLKLCIDIILGLGLNLITGITGQFSLGHAGFMA 81

Query: 76  IGAYSYVILG---SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           IGAY+  ++    S   + I L + +  ++SG  G ++G+P+L+ RGDYLAIATL + EI
Sbjct: 82  IGAYTSALMTLRISSSPVMIILAVILGGILSGFLGFLIGIPTLRLRGDYLAIATLGLGEI 141

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            + ++        G                               I     +        
Sbjct: 142 IKIVIQNVDQTILG------------------------GAAGLSSIPLYSSFEFCFICMV 177

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +   +I  + +++   A  ++R+++ A  S+   +  AK+ AF + + F G+AGA ++  
Sbjct: 178 ICYFVITNVLKSSFGRACISVREDEIASESMGVNVTKAKILAFIIGTFFAGVAGALYSGY 237

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              I P  F F ++I ++ IV+LGG+ +++    A  IL  V                  
Sbjct: 238 VGVIQPKNFGFMKSIDILMIVVLGGLGNINGTIIAAFILNIVSFALQDFAE--------- 288

Query: 313 DCSFNMRHTTLMVIALFLVILMR 335
                     L  + L  ++L++
Sbjct: 289 ------LRMILYSLLLIAIMLIK 305


>gi|331002335|ref|ZP_08325853.1| hypothetical protein HMPREF0491_00715 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330410151|gb|EGG89585.1| hypothetical protein HMPREF0491_00715 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 319

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 81/332 (24%), Positives = 144/332 (43%), Gaps = 43/332 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           LNK       + ++    +F  + +    +   S+ + I + +M A  L++V G LG LS
Sbjct: 4   LNKKTIFNIAIMLLAYAAVFALINSGILSRQYKSLIVPICVNIMLAVSLNLVTGFLGELS 63

Query: 68  LNCVIAYAIGAYSYVILGSRYGL-----SIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           L      +IGAY   ++    G      S    +    +++   G ++G+P L+ RGDYL
Sbjct: 64  LGHAGFMSIGAYISALISINTGFLPPALSFLTALICGGIMAAVFGFLIGVPVLRLRGDYL 123

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           AI TL   EI +++ I +  IT G  G+                          V  +  
Sbjct: 124 AIVTLAFGEIIKSV-INYLDITGGSKGLSKIP----------------------VYSDYN 160

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            + V+  +  +   +I  L  +    A ++IRDN  A  S+   I   K+SAF +++ F 
Sbjct: 161 NFTVVFIIMVICIVLISNLINSRDGRAIKSIRDNDIAAESIGIKISKYKVSAFVIAAGFA 220

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+AGA +A +   I P++F ++++I ++  V+LGGM ++     +  IL  + E   G  
Sbjct: 221 GLAGALYAHNVGIIKPNIFDYNKSIEILVFVVLGGMGNIPGSIISAIILTVLPEFLRG-- 278

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
                         +     L  I L L+++ 
Sbjct: 279 -------------ADNLRMLLYAIVLILMMIF 297


>gi|88705928|ref|ZP_01103637.1| ABC transporter permease protein [Congregibacter litoralis KT71]
 gi|88699999|gb|EAQ97109.1| ABC transporter permease protein [Congregibacter litoralis KT71]
          Length = 529

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 88/289 (30%), Gaps = 21/289 (7%)

Query: 53  AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112
           A GL+I  G +G++++       +GAY+  +L         + + ++   +     I+GL
Sbjct: 254 AVGLAITFGVMGVINMAHGELIMLGAYTTWVLQQWLPGQPGVALLLAIPFAFLVSAIVGL 313

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
              +    +L    L      + +L  +      +  +                +     
Sbjct: 314 IIERGVIRFLYGRPL------ETLLATFGISLILQQAVRSIFSPLNRSVLTPEWLAGSWE 367

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
            ++ +        +LL    + A ++  +R T +    R +  N+    +L         
Sbjct: 368 ITAGLSLTYNRMAILLFSLLVFAGLLTLMRYTRLGLQVRAVAQNRAMARALGVRSSRVDA 427

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             FA+ S   G+AG   +   +         S  I    +V+ GG+ +L     A   L 
Sbjct: 428 LTFALGSGVAGVAGVALSQLTNV--GPNLGQSYIIDSFLVVVFGGVGNLWGTLVAAFSLG 485

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              ++   +       ++                        R   L  
Sbjct: 486 VANKVIEPLAGAVLAKIVLLVFLILFLQR-------------RPQGLFP 521


>gi|158425701|ref|YP_001526993.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158332590|dbj|BAF90075.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 327

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 69/327 (21%), Positives = 129/327 (39%), Gaps = 24/327 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           LL  +    L   L       Y  ++ I +L+Y   +   +I+ G  G LSL   + + I
Sbjct: 15  LLLALVIFALVALLPFGVKDVYTLNVLILLLLYAGLSQSWNILGGYCGQLSLGHALYFGI 74

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +L +++G+  W  + +  +I+    M +G    +  G Y  IAT++++EI   +
Sbjct: 75  GAYTSTLLYTKFGVLPWFGMALGGVIAALIAMGIGHACFRLAGHYYVIATIVIAEIGLLL 134

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
              W              R  +                 F   ++  +Y +L    +   
Sbjct: 135 FHNWDWAGAATGIELPIGRDSW-------------LTFQFARDKLPYFYFVLVFAAVVWL 181

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +   +  +     WR ++DN +A  SL   +  +K+ A AVS+ F  + G+F+A     I
Sbjct: 182 VTWKIENSKWGYWWRAVKDNPEAAESLGVVVFNSKMMAAAVSAFFTAVGGSFYAQFLGYI 241

Query: 257 SPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            P+    F  ++++    +LGG+ +L       AILI + EL           +      
Sbjct: 242 DPESVMTFQFSLLMALPAVLGGIGTLWGPVLGAAILIPLTELTRTYMGGSGKGI------ 295

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                  +    +  + L R   L+ L
Sbjct: 296 ----DLIVYGCLIMAIALARPDGLVGL 318


>gi|226304846|ref|YP_002764804.1| branched-chain amino acid ABC transporter permease/ATP-binding
           protein [Rhodococcus erythropolis PR4]
 gi|226183961|dbj|BAH32065.1| putative branched-chain amino acid ABC transporter
           permease/ATP-binding protein [Rhodococcus erythropolis
           PR4]
          Length = 616

 Score = 97.2 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 56/275 (20%), Positives = 111/275 (40%), Gaps = 15/275 (5%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
              I  +   GL++ +G  G L+L     YA GAY+  ++       I + +  +  ++ 
Sbjct: 42  LACILALVVSGLNLSLGFAGELALGQAAMYAAGAYTAGLMSQAGHTDILVQLAAAGAVAL 101

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
             G++ G+P L+     LA+ +  +  +  ++L  +   T G+ G+   +     G+ + 
Sbjct: 102 GVGILTGVPGLRLGNWSLAMTSFFLVLLVPDVLAIFGGKTGGRNGLTGMEPPTLFGSELD 161

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           +                  Y V++ +  L  +++  L  +    A+RT++ +     S  
Sbjct: 162 TQQY---------------YMVVVVVTVLWFAVMRNLVVSRHGIAFRTLKQSPVLASSQG 206

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
            ++   KL  +A+ +   G+AGA FA +   ISP+ F F+    V++  ILGG  S+   
Sbjct: 207 VSVFRMKLLGYAIGAFPAGLAGALFANTDLFISPEAFGFTFATAVLAASILGGAASVYGA 266

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
               AI+            Y       F     + 
Sbjct: 267 VVGAAIMQLGPNQSTAFQEYSLIFYGGFLIIGGVL 301


>gi|152980537|ref|YP_001353497.1| ABC-type branched-chain amino acid transport system permease
           protein [Janthinobacterium sp. Marseille]
 gi|151280614|gb|ABR89024.1| ABC-type branched-chain amino acid transport system permease
           protein [Janthinobacterium sp. Marseille]
          Length = 538

 Score = 97.2 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 87/291 (29%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  +    +       I    +++     I+       
Sbjct: 265 ITFGLMGIINMAHGELLMIGAYTTYVCQLVFRKFFPEAIDAYLLVALPAAFIVAAAVGIA 324

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W        G+        +     S +         +
Sbjct: 325 LER--LVIRWLYGRPLETLLCTWGISLILMQGVRSIFGAQNVEVANPSWMSGGVTVLGSL 382

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+  ++ L L +T +    R +  N++    +  +     +  F +
Sbjct: 383 VLSYNRIVIIFFALFVVLAVWLILNKTRLGLFVRAVMQNRRMAACVGVSTGKIDMMTFGL 442

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
                G+ G   A S+             +    +V+LGG+  L+    A   L  V + 
Sbjct: 443 GCGIAGLGGV--ALSQLGNVGPDLGQGYIVDSFMVVVLGGVGQLAGTVIAAFGLGEVNKF 500

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
              +                      +++ + + I  R   L  L+  S  
Sbjct: 501 LEPVAGAVLAK-------------IAILVFIIIFIQKRPQGLFALKGRSVE 538


>gi|330826792|ref|YP_004390095.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|329312164|gb|AEB86579.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 345

 Score = 97.2 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 77/322 (23%), Positives = 134/322 (41%), Gaps = 17/322 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A +      L L    +  Y   M   + I V  + GL+I+ G  GL+SL       +GA
Sbjct: 24  AWLIIAAALLLLFPFAASDYWLYMACLVAINVASSTGLNILTGYTGLVSLGQAAFMGLGA 83

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL +R G    L +    +++   G+++G+PSL+ +G YLAIAT+  S I   +  
Sbjct: 84  YTVAILQTRLGTPFLLNLLAGGVVAMLGGIVVGIPSLRVKGLYLAIATIAASFIAHFLFA 143

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            ++ IT G AGI +                  R     +     +Y++++ +  L     
Sbjct: 144 NFQ-ITGGTAGISMPPA---------------RLLGMDLDTSFRLYWLIVPVTLLMLLGA 187

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L RT I  A+  IRD   +   L   ++  KL +F +SS + G+AG  +A     ++P
Sbjct: 188 ANLFRTRIGRAFIAIRDRDISAEVLGIPLLRYKLLSFGLSSFYAGIAGGLWAYFFRVVTP 247

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F  S +I  ++ +I+GGM S+         +  V EL   +               + 
Sbjct: 248 ESFPLSMSIFFLAAIIVGGMGSILGGILGAVFMTMVPELLKLIVD-LLPGGAALAVFLSP 306

Query: 319 RHTTLMVIALFLVILMRSHSLL 340
               +    +   ++     L 
Sbjct: 307 VRLIVFGALIIGFLVFEPLGLA 328


>gi|159045237|ref|YP_001534031.1| putative high-affinity branched-chain amino acid transport system
           [Dinoroseobacter shibae DFL 12]
 gi|157912997|gb|ABV94430.1| putative high-affinity branched-chain amino acid transport system
           [Dinoroseobacter shibae DFL 12]
          Length = 367

 Score = 97.2 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 51/366 (13%), Positives = 108/366 (29%), Gaps = 36/366 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKS---QKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
           +++   I      +  + +       +      YI S+  + L Y + A  L +V G  G
Sbjct: 5   VDRRMGIFLTGLFILTVAIPAGNLWMEGQPVPSYIVSLLGKYLCYALLAVALDLVWGYTG 64

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           +LSL     +A+G Y+  +   R      +                 LP   +  D    
Sbjct: 65  ILSLGHGAFFALGGYAMGMHLMREIGDRGVYANPELPDFMVFLNYQELPWFWYGFDQFWF 124

Query: 125 ATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRS 165
           A L++  +   +   +                             +  +  +     +  
Sbjct: 125 ACLMVLLVPGALAFVFGWFAFRSRVTGVYLSIITQAMTYALMLAFFRNEMGFGGNNGLTD 184

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                 F          ++ +          I   + ++ +      +RD++     L  
Sbjct: 185 FKDVLGFDLQSDATRAGLFVLSALALTAGLLISKAITKSKLGQILVCVRDSEARTRFLGY 244

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
            +   KL  + VS+   G+AGA +      I+P  F  + +I ++  V LGG  +L   A
Sbjct: 245 RVERYKLFVWVVSAMMAGVAGALYTPQVGIINPGEFSPANSIEIVIWVALGGRGTLVGAA 304

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
               ++     L  G               F       +      V +     +L +   
Sbjct: 305 IGAILVAAAKTLLTGW--------------FPEIWLFALGALFIFVTIFMPKGVLGVVEN 350

Query: 346 SNFLER 351
           +   ++
Sbjct: 351 TLKRKK 356


>gi|319794133|ref|YP_004155773.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315596596|gb|ADU37662.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 370

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 75/328 (22%), Positives = 135/328 (41%), Gaps = 16/328 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V  ++ F  +  T S    D++ I  L   + A GL+++ G  G LSL      A+GA+
Sbjct: 17  LVVLVIAFGIVPFTASGYVFDALLIPFLALSLAAVGLNLLTGYAGQLSLGTAAFMAVGAF 76

Query: 80  SYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           +      R      L+ I ++ + + A G++ GLPSL+ RG YLA++TL      Q  L 
Sbjct: 77  AAYNFNLRVDGLPLLVSIGLAGLAATAVGLVFGLPSLRLRGFYLAVSTLAAQFFVQWALT 136

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           K+   +N  A   +      +   V                 +  Y   L +  +   + 
Sbjct: 137 KFSWFSNDNASGVIDAPALEVAGIVFD-------------TPVGRYIFSLSIVTVLTLLA 183

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRIS 257
             L RT   + +  +RDN+ A   +   ++  KL AFAVSS  +G+AG  +       + 
Sbjct: 184 WRLVRTQTGHHFIAVRDNELAARVIGVPVLRTKLLAFAVSSFIVGVAGVLWGFVYLRTVE 243

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F    +  ++ IVI+GG+ ++       A+++    L   +  + F          +
Sbjct: 244 PAGFNLDRSFQILFIVIIGGLATIRGAFFGAALIVVFPLLLSRVGSFLFGGWFDSGV-LD 302

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTP 345
           M    ++   +   + M    L+ L   
Sbjct: 303 MSQRIVLGALIIFFLAMEPQGLVALWDR 330


>gi|227523642|ref|ZP_03953691.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Lactobacillus hilgardii
           ATCC 8290]
 gi|227089214|gb|EEI24526.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Lactobacillus hilgardii
           ATCC 8290]
          Length = 319

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 85/340 (25%), Positives = 153/340 (45%), Gaps = 43/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           KY+ I  ++ +    L+   +       +I++M + I I ++ A GL++++G  G  SL 
Sbjct: 6   KYNIIWLIIMISGFYLMNTLILIGVINAFIENMLVTIGINIILATGLNLIIGFAGQFSLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+          +L I +  ++S    +I+G+P+L+ RGDYLAIAT+
Sbjct: 66  HAGFMAIGAYATAIITQTATTPAGFYLSIVIGIVVSILVALIVGIPTLRLRGDYLAIATM 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +EI + I+I    IT G AGI+   +L    T                         +
Sbjct: 126 GAAEIIR-IIINNMKITGGAAGIFNIPQLASWPT-------------------------V 159

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             M  ++  II+    +    A  ++R+++ A  ++   +   KL+AF + +A   +AG+
Sbjct: 160 YTMVCVTTIIIVNFIHSRGGRAVTSVREDEIAAEAMGINVFKWKLAAFTLGAATAAVAGS 219

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A+    ISP+ F   E+I ++ IV+LGG+ S++    A A+L  +  +          
Sbjct: 220 LHASFLQTISPNDFGIMESISILIIVVLGGVGSITGTFVAAAVLGVLDTVLQ-------- 271

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                   F      +   AL L+++ +   LL     S 
Sbjct: 272 -------DFGALRMVIYAAALILIMIFKPSGLLGTWELSI 304


>gi|330006820|ref|ZP_08305707.1| branched-chain amino acid ABC transporter, permease protein
           [Klebsiella sp. MS 92-3]
 gi|328535734|gb|EGF62177.1| branched-chain amino acid ABC transporter, permease protein
           [Klebsiella sp. MS 92-3]
          Length = 349

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 127/353 (35%), Gaps = 44/353 (12%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L ++   +  L         YI  +   I I+++ A   +++ G  G LSL      A+G
Sbjct: 15  LVIIVICIALLAGINVVFNDYIVRVISTIFIFMILAVSYNLINGVTGQLSLEPNGFVAVG 74

Query: 78  AYSYVI-------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           AY   +                               + +S + + A  + + +P  + R
Sbjct: 75  AYVTALLILSSDSKVDMFEMAAPSPWILSLHAGFLPALLISGLCAAALAVCLAVPVFRVR 134

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           GDYLAI TL    I + + I    ITNG  G+    +                       
Sbjct: 135 GDYLAIVTLGFGFIIKILAINNPQITNGAIGLNDIPQQPH-------------------- 174

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
               + +       L+  +IL L  +      + IRD++ A  ++       K  AFA S
Sbjct: 175 ----LLFWCGLFALLATGMILQLVWSKYGRMMKAIRDDEDAAIAMGVNTFRIKTCAFATS 230

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           + F G+ G   A+    ISP +F F     ++ I++LGG+ S +     T +++G  E  
Sbjct: 231 AFFEGIGGGLLASLLTTISPGLFDFMLTFQLLIIIVLGGLGSTTGALLGTVLVVGSGEWL 290

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             ++            ++      +  + L +++L     LL  +       R
Sbjct: 291 RFLDQPLQFFGHDLG-AYPGLRMVVFSLLLLIIMLFAREGLLGKKEIWQMGRR 342


>gi|316933050|ref|YP_004108032.1| urea ABC transporter permease UrtB [Rhodopseudomonas palustris
           DX-1]
 gi|315600764|gb|ADU43299.1| urea ABC transporter, permease protein UrtB [Rhodopseudomonas
           palustris DX-1]
          Length = 537

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 91/297 (30%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++      S   L   S +I+     ++ 
Sbjct: 258 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQETIRTSYPALFDYSLLIAVPLAFLVA 317

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
             +        ++   +     + +L  W      +  +              S      
Sbjct: 318 GATGVLIER--SVIRFLYGRPLETLLATWGLSLILQQAVRTIFGPTNREVGNPSW-MSGA 374

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++L     +   ++  LR TA+    R +  N++   S+        
Sbjct: 375 FELGQITITYNRLWILCFTLAVFVLLLAMLRYTALGLEMRAVTQNRRMAASMGIATSRVD 434

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   A S+          S  I    +V+ GG+ +L         L
Sbjct: 435 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFSL 492

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +                           +++ + L I  R   L  L+  +  
Sbjct: 493 GIANKFLEPFAGAVLAK-------------IAILVLIILFIQKRPRGLFALKGRAVE 536


>gi|183602257|ref|ZP_02963624.1| branched-chain amino acid transport system permease protein
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|219682620|ref|YP_002469003.1| branched-chain amino acid transport system permease protein
           [Bifidobacterium animalis subsp. lactis AD011]
 gi|241190195|ref|YP_002967589.1| branched-chain amino acid transport system permease
           [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|241195601|ref|YP_002969156.1| branched-chain amino acid transport system permease
           [Bifidobacterium animalis subsp. lactis DSM 10140]
 gi|183218471|gb|EDT89115.1| branched-chain amino acid transport system permease protein
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|219620270|gb|ACL28427.1| branched-chain amino acid transport system permease protein
           [Bifidobacterium animalis subsp. lactis AD011]
 gi|240248587|gb|ACS45527.1| branched-chain amino acid transport system permease protein
           [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|240250155|gb|ACS47094.1| branched-chain amino acid transport system permease protein
           [Bifidobacterium animalis subsp. lactis DSM 10140]
 gi|289177905|gb|ADC85151.1| LivM [Bifidobacterium animalis subsp. lactis BB-12]
 gi|295793182|gb|ADG32717.1| branched-chain amino acid transport system permease protein
           [Bifidobacterium animalis subsp. lactis V9]
          Length = 327

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 57/310 (18%), Positives = 123/310 (39%), Gaps = 8/310 (2%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
               Y + A GL+I  G  GL+++       +GAY + I     G  ++  +  + +++ 
Sbjct: 18  TTAAYALAAIGLNIHFGMSGLMNMGQAGFMLLGAYGFAI-TQMNGCDLFTSVLTALVLAA 76

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI--LIKWKPITNGKAGIYVADRLYFL--- 159
             G+++G+P+LK   DYLA+ TL  +EI + +        +T G AGI   +        
Sbjct: 77  IYGILLGIPTLKLGPDYLAMVTLAAAEIIRIVGRSTSLTWLTGGSAGIAPQNFTEKFENA 136

Query: 160 -GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S        ++ +    ++  V   +  ++  +      +      + IR+++ 
Sbjct: 137 SPLPNGSTKFLLWTYNNNIANSWWLRIVAWVLVAIALLLCWRWFHSPWGRVLKGIREDEN 196

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL  ++   K+ A  +   F  +AG  F      ++PD    +      +I++LGG 
Sbjct: 197 AIRSLGKSVTKYKMQALILGGLFGAIAGIVFILP-RSLNPDSLGRTVTFYTWTILLLGGA 255

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++      + +L  ++            + +            ++ +AL L+++ R   
Sbjct: 256 ATIMGPVLGSCVLWVLLTAVKETMRVTIPTTVVSSNQIEALGWVIVGVALMLLVIFRPQG 315

Query: 339 LLRLRTPSNF 348
           +L  +    F
Sbjct: 316 ILGNKKELAF 325


>gi|222112622|ref|YP_002554886.1| inner-membrane translocator [Acidovorax ebreus TPSY]
 gi|221732066|gb|ACM34886.1| inner-membrane translocator [Acidovorax ebreus TPSY]
          Length = 335

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 115/283 (40%), Gaps = 9/283 (3%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            LL    + A        S+  ++LI+ + A G ++++G  GLLS    I + +G+Y+  
Sbjct: 7   FLLALAIVVAMPLCMQSGSLASEVLIFGLAAMGCNLLLGYTGLLSFGQGIFFGLGSYTIA 66

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +L +R+ L + L +  +  +  A   I+G  ++  RG Y  + TL  +++F  +      
Sbjct: 67  LLLTRWTLPMPLALLAAVAMGAAGAAIVGWVAIHQRGTYFVMLTLAFAQMFYFLAYTATG 126

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+    R           +         +      Y  +  +   +  ++  + 
Sbjct: 127 LTGGDNGLLDIPRPS---------LAVAGQTLWPLDSPWQYYGFVAVLFLAAFWLLRRVC 177

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            +        +RDN++   ++   +   KL AF +S A  G+AGA  A           +
Sbjct: 178 DSVFGRTLLAVRDNEERAAAVGYDLRLLKLQAFVISGAVTGLAGALHAMMTGIAPLSNAE 237

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           +  + +++ + ++GG  +L       A  + + +    +   +
Sbjct: 238 YHTSEMILVMTVIGGTGNLLASVLGAAFYVLLGDWLSTLWPRW 280


>gi|148989830|ref|ZP_01821124.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP6-BS73]
 gi|147924772|gb|EDK75856.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP6-BS73]
          Length = 318

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 76/325 (23%), Positives = 136/325 (41%), Gaps = 42/325 (12%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L+ + +       +   +  QI I ++ A GL+++VG  G  SL      AIGAY+  I+
Sbjct: 21  LISVLVSVGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80

Query: 85  G--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           G  S    + +  + V  ++SGA  +++G+P+L+ +GDYLA+ATL +SEI +  +I    
Sbjct: 81  GSKSPTYGAFFGAMLVGTLLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +TNG AGI                                    +     ++    L   
Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+  A     + P  + 
Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  +I V+ IV+ GG+ S++    +  +L  +  L   +                     
Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVSAIVLGILNMLLQDV---------------ASVRMI 280

Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347
           +  +AL LV++ R   LL     S 
Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305


>gi|170692049|ref|ZP_02883213.1| urea ABC transporter, permease protein UrtB [Burkholderia graminis
           C4D1M]
 gi|170143333|gb|EDT11497.1| urea ABC transporter, permease protein UrtB [Burkholderia graminis
           C4D1M]
          Length = 548

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 81/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ + +            +++     +        
Sbjct: 274 ITYGLIGVINMAHGEFLMIGAYATYVVQNLFQRFAPGAFDWYPLLAVPASFVAAALVGIV 333

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 334 IER--LVLKHLYGRPLETLLTTFGISLILIQATRMLFGAQNVQVVNPSWMSGGVTVLPNL 391

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L    F+       L +T +    R +  N++    +          AFA 
Sbjct: 392 ILPYNRLVILAFALFVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 451

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  L+        L  V + 
Sbjct: 452 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTVIGGFGLGLVSKA 509

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 510 IEPFWGAVLAK-------------IAVLVLIVLFIQKRPQGMFALKGRSAE 547


>gi|118589403|ref|ZP_01546809.1| inner-membrane translocator [Stappia aggregata IAM 12614]
 gi|118438103|gb|EAV44738.1| inner-membrane translocator [Stappia aggregata IAM 12614]
          Length = 412

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 51/368 (13%), Positives = 105/368 (28%), Gaps = 40/368 (10%)

Query: 1   MSIFSLR-LNKYDKILCLLAVVYPLLLFLFL------GATKSQKYIDSMGIQILIYVMFA 53
           MS F  R ++    I   +     +L+                 Y  ++  + L Y + A
Sbjct: 2   MSSFLFRAMDARAGIFLAIMAAVIVLVPAGNLLMPEGSTFHVPNYAVTLMGKYLTYALLA 61

Query: 54  WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113
             + +V G  G+LSL     +A+G Y+  +   R   +  +                 LP
Sbjct: 62  LAVDLVWGYCGILSLGHAAFFALGGYAMGMYLMRQIGTRGVYGDPILPDFMVFLNWGELP 121

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVAD 154
              +  D    A L++  +   +   +                             +  D
Sbjct: 122 WYWYGFDMFWFAALMVLLVPGVLAFVFGWFAFRSRVTGVYLSIITQALTYALLLAFFRND 181

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
             +     +        F          ++        +   I   + R+ +      +R
Sbjct: 182 MGFGGNNGLTDFKDILGFDIQADTTRAGLFAASGLALVVCFLICRAITRSKLGKVLVAVR 241

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           D +     L   +   KL  + +S+   G+AGA +      I+P  F  + +I V+  V 
Sbjct: 242 DAESRTRFLGYRVEHYKLFVWTLSAMMAGIAGALYVPQVGIINPGEFAPANSIEVVIWVA 301

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +GG  +L        ++                    F  +        +     +V L 
Sbjct: 302 VGGRGTLVGAVLGAVLVNFAKTW--------------FTAALPDIWLFALGGLFVVVTLF 347

Query: 335 RSHSLLRL 342
               ++  
Sbjct: 348 LPKGIVGT 355


>gi|319782099|ref|YP_004141575.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317167987|gb|ADV11525.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 344

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 66/326 (20%), Positives = 130/326 (39%), Gaps = 27/326 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            +  V    L   L       Y   + I   IY + A    + +G  G+ +   +  + I
Sbjct: 30  AIGFVLGFALLALLPLIFGDTYARHILIMAFIYAIVASNWDLSLGYGGVFNFGHLALFGI 89

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G Y+Y +L        W+ +  S +I+    +++ +P L+ +G Y+ + T   +++   +
Sbjct: 90  GVYAYSLLTKLAEFDPWIALFASGVIATLAAILVTIPILRLKGIYIILVTFGFAQLVMQV 149

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           +I    IT G  G+     LY     +    +               +Y+ L +   S  
Sbjct: 150 IISQSAITGGTQGLVRIPGLYVFDHNMVRDGKS------------AYFYIALALLVASTL 197

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +    R+    +   +RDN++   S   +I+  ++   A S+ F G+AGAF+AA +   
Sbjct: 198 FLRVFVRSRTGASIVALRDNEEYAISRGVSIVRQRMLTLAASAFFTGIAGAFYAAYQRNA 257

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           S D+F  S   I++S+V+LGG +++     A+ +L    E                   F
Sbjct: 258 SIDVFGMSLATIILSMVLLGGTSTIYGAIIASFVLTIFAEWMA---------------DF 302

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
                 +  + +  V+L     L+ +
Sbjct: 303 GAWRPMITAVLIIGVMLAYPSGLVGM 328


>gi|90422199|ref|YP_530569.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90104213|gb|ABD86250.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 314

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 69/325 (21%), Positives = 133/325 (40%), Gaps = 30/325 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + ++    +   L       Y   +   + +    A GL+I++G  G +SL     + IG
Sbjct: 10  VILIVLAAVIALLPLAFPSSYYLRVAALVWVSAFAAIGLNILMGKAGQVSLGHAGFFGIG 69

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL +++GL     + + A +S     ++G P L+ +G YLAIATL    +   ++
Sbjct: 70  AYAVAILPAQFGLPSLAALLIGAALSALLAFLVGRPILRLKGHYLAIATLGFGVLVAMVI 129

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                 T G  G+ VA    F      S                  Y++  G+  +   I
Sbjct: 130 TTESQWTGGPDGMAVAKLSLFGWRASGSATW---------------YWITGGLLLIGTWI 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L L  T    A+R + D++ A       +   KL AF +++ +  +AG+  A     I+
Sbjct: 175 ALNLDDTPTGRAFRALHDSEIAARVTGVDVNRFKLQAFVIAAVYGSIAGSALAMMNGFIN 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           PD   F  ++ ++++V+LGG+ S+       A+LI + ++      Y             
Sbjct: 235 PDQAGFLHSVELVTMVVLGGLGSVVGSIVGAAVLIVLPQMLTVFQDYEN----------- 283

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                ++   + L ++     ++ +
Sbjct: 284 ----LMLGAIIILSMIFMRDGMVPM 304


>gi|319780304|ref|YP_004139780.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166192|gb|ADV09730.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 349

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 107/315 (33%), Gaps = 9/315 (2%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 Y   + + I +  +    LS+  G  G+ SL  V     GAY   IL       
Sbjct: 26  PHVLSDYFVRIILLIALNAILVLALSLSNGFTGVFSLGHVGFIGAGAYISGILSIPVQQK 85

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + LL  +   +       +    +      L    +    +  +                
Sbjct: 86  MALLPHLPGFLHAFSLPFLPATLVAGVLTALLAVVVGYPLMRLSGYFVSVATMG------ 139

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
               +      + +        +   +        ++G   ++  ++  L  +    A +
Sbjct: 140 --FLIIVNVVLINASDFTRGARTFTGVPLETTLPWVMGWLAITVFVLARLVYSPFGRAMK 197

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +RD+  A  ++   ++  +L AF + + F G+ G+ +A      SP+ F F+  + +I+
Sbjct: 198 AVRDDTIAASAVGIGVLRTRLIAFVIGAFFSGVGGSLYAHYLGSFSPNTFYFALTMSLIT 257

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +++LGGM SL+        +  + E+   +   +          F      ++     LV
Sbjct: 258 MLVLGGMGSLTGAVVGVICVSLLSEVLRSVERGFTIGDFAVPALFGASQ-IVLGFIFILV 316

Query: 332 ILMRSHSLLRLRTPS 346
           ++ R   ++  R  +
Sbjct: 317 MIFRPKGIMGDRELT 331


>gi|90419446|ref|ZP_01227356.1| putative ABC transporter permease protein [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90336383|gb|EAS50124.1| putative ABC transporter permease protein [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 339

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 59/337 (17%), Positives = 124/337 (36%), Gaps = 29/337 (8%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
             RL+     L    +   L L   L      +++     +I+I+ + A  L +++G   
Sbjct: 21  PSRLDGRGTALAAGLIFVTLALLPLLATAIDDQFLLVTATRIMIFALAALSLDLILGYGA 80

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           L+S        +GAYS  IL +     I +   V+ ++      + G  SL+ +G Y  +
Sbjct: 81  LVSFGHAAFIGLGAYSVAILAAHGIDDILVQAAVAILVCSLFAFVTGAISLRTKGVYFIM 140

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL   ++    ++                        +    R   F +  +   +  +
Sbjct: 141 ITLAFGQMAYFFMVSLSAYGG--------------DDGITLAARSTLFGAPVLKGNLTFF 186

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           YV+L    L+   +  +  +      R  RDN+    ++       +L+A+ ++ A  G+
Sbjct: 187 YVVLAALALAFVALRAVVGSRFGRVLRGTRDNRVRMQAIGFAPFPYQLTAYVIAGAIAGL 246

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG F A   + +SP    +  +  +I +V+LGGM +L          + + +    ++ +
Sbjct: 247 AGVFLANQAEFVSPAYMSWQRSGELIVMVVLGGMGTLVGPIAGAVAFLLLEDWLAQISEH 306

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +                  + I L L++L     +  
Sbjct: 307 WKLG---------------LGIFLVLLVLFTRGGIAG 328


>gi|91789902|ref|YP_550854.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91699127|gb|ABE45956.1| amino acid/amide ABC transporter membrane protein 1, HAAT family /
           amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Polaromonas sp. JS666]
          Length = 632

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 57/306 (18%), Positives = 123/306 (40%), Gaps = 33/306 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y+  + I +L+ V+FA  L  ++G  G+ S      + +GAY   +L     L + + 
Sbjct: 343 SPYVTVLLIDLLVAVLFAASLHFIMGPAGMHSFGHAAYFGLGAYGAALLVRSLNLPMEVA 402

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + V+  ++     + G   ++  G YLA+ TL  ++I   I  +W   T G  G+     
Sbjct: 403 LLVAPALAALGAFVYGWFCVRLSGVYLAMLTLAFAQITWAICYQWDAFTGGSNGLTGV-- 460

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                           +P+ ++  +   YY+ L +      ++  +  +    A R  RD
Sbjct: 461 ----------------WPAGWLADKRIYYYLTLVLVVGGVLLMHRMLYSPFGYAMRAARD 504

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +     ++   +   +  AF ++ +F G+AGA +A S+  ISP+     ++I  + +V+L
Sbjct: 505 SVLRSDAIGINVKRMQWVAFVMAGSFAGLAGALYAFSKGSISPESLHVGKSIDGLVMVLL 564

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ +L            + +       Y+                 ++   + +++L+ 
Sbjct: 565 GGVQTLLGPVVGAVTFTWLHDTVARNTDYWRA---------------MLGAIILMLVLLF 609

Query: 336 SHSLLR 341
              +  
Sbjct: 610 PQGIAG 615



 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 94/303 (31%), Gaps = 13/303 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +         + A GLS++ G   +++      + +G Y    L +  G ++     +
Sbjct: 10  LLNGLAGASSLFLVAAGLSLIFGVTRIVNFAHGSFFMVGIYVAYSLVATLGSTLGFWPAL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                    +   +  L  R  Y A     +   F   L+    +        +      
Sbjct: 70  LLAALAVGVLGALVEVLLLRRIYHAPELFQLLATFALGLVIKDGV--------LWFWGAE 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                R+             +  +  ++++    +   + L L +T      R    +++
Sbjct: 122 ELLGPRAPGLTGSVSILGRQFPSYDLFLIVAGPVVLGLLWLLLTKTRWGTLVRAATQDRE 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L     +   + FA+ +   G+ GA                +       +V++GGM
Sbjct: 182 MVSALGVNQAWLFTAVFALGALLAGLGGALQLPREPA--NLEMDLNIIGAAFVVVVVGGM 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL     A  ++  +  +C  +       +     SF+     +  + +  V++ R   
Sbjct: 240 GSLPGAYVAALLIAELKAICIWLG---LVEIAGISISFSKLTLVVEFLVMAAVLVARPWG 296

Query: 339 LLR 341
           L  
Sbjct: 297 LFG 299


>gi|55380262|ref|YP_138111.1| branched-chain amino acid ABC transporter permease protein
           [Haloarcula marismortui ATCC 43049]
 gi|55232987|gb|AAV48405.1| branched-chain amino acid ABC transporter permease protein
           [Haloarcula marismortui ATCC 43049]
          Length = 674

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 60/326 (18%), Positives = 120/326 (36%), Gaps = 18/326 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             V  L L          +Y   +  +ILI+ +FA  L IV+G  GL+ L   + Y +GA
Sbjct: 334 VAVVALALAPVAILLMGNQYYLVVLNEILIWAIFALSLDIVMGYAGLVPLGHTMFYGVGA 393

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  ++   Y  S+++++  + ++      I+G  S++  G Y A+ TL  +E+  + + 
Sbjct: 394 YTAALVMLHYSQSVFVVLLGAILLCAILAWIVGSLSIRVSGVYFAMITLAFAELLYSAVF 453

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           K+         +     +             F      +  +   YY+ L +  LS    
Sbjct: 454 KFDFTGGSDGLLGFEAFIGLGSLGASLSNIEFGLLGYEIGQQFVFYYLALLIAVLSFLFA 513

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI-- 256
             +      +  ++IR++++    +   +   K  AF +S    G+AG   A S   +  
Sbjct: 514 RRMMNAPFGSVLQSIRESEERAEFIGYDVNRYKRRAFVISGGMAGLAGGLLAVSPSTVIV 573

Query: 257 -SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
                  +  +  VI I + GGM +L      + +  G  E        +          
Sbjct: 574 SPDQTLNWIHSGEVIVIALFGGMGTLYGPMIGSGVFFGAEEFLSSYTDQW---------- 623

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  ++     L +L     ++ 
Sbjct: 624 -----RLIIGTMFILFVLFVPRGIVS 644



 Score = 92.6 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 111/307 (36%), Gaps = 14/307 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG--LSIWLLI 96
           + +     ++YV+ A GLS++ G + +++ +    +A+GAY  + + + +G     W+ I
Sbjct: 10  LLNGLTLGMVYVLLAAGLSVIFGVMDVINFSHGELFALGAYFALSIIAPFGAGTGFWIAI 69

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V+ ++ G  G  +   +++       +  ++++     ++     +  G     +A   
Sbjct: 70  VVAPVVVGLIGAAIERTTVRPLYGRDPLYHILLTFGLVLVINDAIRLIWGTQQRQLAVPE 129

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           Y                   V   ++ Y++++    L+      L RT      R    +
Sbjct: 130 YLSQP----------ISILGVQVSVYNYFMIVFAALLAVVTWYLLNRTKYGMIIRAGSQD 179

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   ++   I       F V +A   +AG      ++         S  I    +V+LG
Sbjct: 180 REMVRNVGIDIDQYYTLVFGVGAALAAVAGIVLGGYQNV--NTGMGNSVIIPAFVVVVLG 237

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S         ++  V  L    +     +      +        + + +  V+L++ 
Sbjct: 238 GLGSFRGAVFGGLLVGVVQTLMRAYSGTVLATFGDTTLTVPNLEGLTVYLLMIAVLLVKP 297

Query: 337 HSLLRLR 343
             L   R
Sbjct: 298 QGLFGTR 304


>gi|326793437|ref|YP_004311257.1| urea ABC transporter permease [Marinomonas mediterranea MMB-1]
 gi|326544201|gb|ADZ89421.1| urea ABC transporter, permease protein UrtB [Marinomonas
           mediterranea MMB-1]
          Length = 538

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 99/297 (33%), Gaps = 21/297 (7%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            + GL+I  G +G++++       +GAY+  ++       I   I V+   +     +MG
Sbjct: 263 ASIGLAITFGVMGVINMAHGEMIMLGAYTTYVVQLMMPNHIDYSIWVAIPAAFLVSGLMG 322

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           +   +       +   +     + +L  +      +  +           +  S +    
Sbjct: 323 VLIERL------VICRLHGRPLETLLATFGISLILQQLVRTIFSPLNRQVSTPSWMSGSL 376

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
             +  +   +   Y+L     +  +++L L+++++    R +  N+    ++     +  
Sbjct: 377 EINPVLSLTLNRLYILAFALLVFMALVLLLKKSSLGLNVRAVSQNRNMAKAMGVKTEWVD 436

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   +   +         S  I    +V+ GG+ +L     A   L
Sbjct: 437 AMTFGLGSGIAGIAGVALSQLTNV--GPNLGQSYIIDSFMVVVFGGVGNLMGTLVAAFTL 494

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +                  +  +    L+++ + L I  R   L   +  +  
Sbjct: 495 GIANKFLE-------------PTTGAVLAAILVLVFIILFIQKRPKGLFPQKGRAAE 538


>gi|240140234|ref|YP_002964712.1| putative branched-chain amino acid transport system permease
           protein [Methylobacterium extorquens AM1]
 gi|240010209|gb|ACS41435.1| putative branched-chain amino acid transport system permease
           protein [Methylobacterium extorquens AM1]
          Length = 347

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 68/318 (21%), Positives = 129/318 (40%), Gaps = 16/318 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILG 85
           F+ +  T +  + +++ I  LI  +   GL++ +G  G  SL      A+GAY+   +L 
Sbjct: 35  FVAIPLTATDYWYNAILIPFLIMALAGLGLNLTMGYGGQASLGTGAFMAVGAYATYNLLL 94

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
               L + + +    +I+GA G+++GLPSL+ +G YL   TL    + + +  +    +N
Sbjct: 95  RLPELPLPVSLAGGGLIAGAVGLVVGLPSLRIKGFYLIAPTLAAQFLIEWVFNQVGWFSN 154

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
             +   ++                       +      Y + L    +   +   L  + 
Sbjct: 155 YASSSAISAPRLVFLGY-------------DLSSPAGRYALTLTSVTVVTVLAWRLVGSQ 201

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFS 264
               WR +RD + A   +   +  AKLSAF V +A  G+AGA +A A    +    F   
Sbjct: 202 TGRNWRAVRDGETAAAVIGVPVARAKLSAFFVGAAVSGVAGALWAFAYLGTVDARSFDLD 261

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
            +   + I+I+GG++SLS      A ++    L   ++  +    L      +     L 
Sbjct: 262 RSFQAMFIIIIGGLSSLSGSFIGAAFIVLTPILLTHLSNAFLGGSLD-GGQLSNLQRILF 320

Query: 325 VIALFLVILMRSHSLLRL 342
              +   ++   + L  L
Sbjct: 321 GALIIGFLIKEPNGLAAL 338


>gi|254488702|ref|ZP_05101907.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. GAI101]
 gi|214045571|gb|EEB86209.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. GAI101]
          Length = 644

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 102/311 (32%), Gaps = 26/311 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---ILGSRYGLSIWLLI 96
                   IY + A GL+I  G +G++++       +GAY+     +    Y +SI + +
Sbjct: 355 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQLFVPDYTVSIIVAL 414

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++  I+ A G++M    +     +  + TL+ +      L +      G     +    
Sbjct: 415 PLAFAITFAAGVVMERLVI-RHLYHRPLETLLATFGISIALQQLAKNIFGTQARPLTSPA 473

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     +      S  +        + +        I+  L+RT +    R +  N
Sbjct: 474 ---------WLDGALVFSDVIQISYIRIAIFVLALLFLGLILFVLKRTRLGLEVRAVTQN 524

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                S+        +  F + S   G+AG          S     +     +  +V   
Sbjct: 525 PGMAASMGINPDRINMLTFGLGSGIAGIAGVAIGLYAKVTSEMGADYIVQSFMTVVVGG- 583

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
            + ++       +++  +              +  F+ S  +   T MV+ + L I  R 
Sbjct: 584 -VGNVWGTLAGASLIGFLQ-----------KGIEWFNPSNTLAAQTYMVLFIILFIQFRP 631

Query: 337 HSLLRLRTPSN 347
             ++  +  + 
Sbjct: 632 KGIVAQKGRAA 642


>gi|299533769|ref|ZP_07047140.1| High-affinity branched-chain amino acidtransport system permease
           protein livM [Comamonas testosteroni S44]
 gi|298718185|gb|EFI59171.1| High-affinity branched-chain amino acidtransport system permease
           protein livM [Comamonas testosteroni S44]
          Length = 641

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 58/307 (18%), Positives = 121/307 (39%), Gaps = 33/307 (10%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
              Y   +   I +  +FA  L  ++G  G+ S      + +GAY   +L     L +  
Sbjct: 345 GGSYATVLLADIFVAALFASSLHFILGPGGMHSFGHAAYFGLGAYGAALLVRTLDLPMEA 404

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
            + +  + + A  ++ G   ++  G YL + TL  ++I   I+ +W   T G  G+    
Sbjct: 405 ALLLGPLAAAAGALLYGWFCVRLSGVYLTMLTLAFAQISWAIVFQWDDFTGGSNGLTGVW 464

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
              +                         Y++ LG+C L   ++  L  + +  A R  R
Sbjct: 465 PPDW------------------ASQGPAFYWLALGICALGIYLLRRLLFSPLGYALRASR 506

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           D+     ++   +   + +AF ++  F G+AGA FA S+  ++PD    ++++  + +V+
Sbjct: 507 DSALRADAIGIDVRRIQWTAFVIAGLFAGLAGALFAFSKGGVAPDTMSVTKSVDALVMVL 566

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           LGG+ +L+      A    + +       Y+                 LM   + +++L+
Sbjct: 567 LGGVQTLAGPVVGAAAFTWLHDTVARNTEYWRA---------------LMGATMLILVLL 611

Query: 335 RSHSLLR 341
               +  
Sbjct: 612 APQGIAG 618



 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 98/305 (32%), Gaps = 17/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96
           + +         + + GLS++ G    ++      Y +GA+     +      +  W  +
Sbjct: 10  LLNGLASASSLFLVSVGLSLIFGVTRTINFAHGSFYMLGAFIAYSSVDLLSPHIGFWPAL 69

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ +  GA G +     L+       +  L+ +     ++        G          
Sbjct: 70  LLAPLACGALGALTETLLLRRIYKAPELFQLLATFALVLVIKDAALWLWGP--------- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                  R+             +  +  +++     +   + L L RT      R    +
Sbjct: 121 -EELFGPRATGLEGSVEILGRQFPTYDLFLIAVGPCVLLGLTLLLTRTRFGTLVRAATQD 179

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +L     +   + FA+ +   G+ GA                        +V++G
Sbjct: 180 REMVGALGVNQAWLFTAVFALGTLLAGLGGALQLPREPA--SLEMDMLTIGAAFVVVVVG 237

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM S+     A  ++  +  +C  +       +  F+ SF+     +  + + +V++ R 
Sbjct: 238 GMGSIPGAFIAALLVAELKAVCIWLG---VQEIAGFELSFSKLTLVVEFLVMAVVLIWRP 294

Query: 337 HSLLR 341
             LL 
Sbjct: 295 WGLLG 299


>gi|118468073|ref|YP_885611.1| ABC transporter permease [Mycobacterium smegmatis str. MC2 155]
 gi|118169360|gb|ABK70256.1| ABC-type transport system permease protein II [Mycobacterium
           smegmatis str. MC2 155]
          Length = 335

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 62/315 (19%), Positives = 115/315 (36%), Gaps = 36/315 (11%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS-RY 88
           L    +  Y   +   + ++   A   +++ G  G +S   V  + IGAY+  IL   ++
Sbjct: 27  LLPLMTSPYYVRVATGVALWAGIALSWNVICGYAGYISFGHVAFFGIGAYTTAILMQPQH 86

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
               W  +PV+A+++GA   ++G P+L+ +G Y AIAT  ++E  +  L      T G  
Sbjct: 87  DWDFWATLPVAAVVAGAVAALVGWPALRLKGAYFAIATWALAEAVRE-LTTVVKFTGGSG 145

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G+    R                          F Y +L       A   L L R+    
Sbjct: 146 GLSTPIRADD---------------------NFFFYTMLGASAIAYAVCYLLLERSKFGF 184

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF-KFSENI 267
             + +RDN+ A  +        K+ AF +S+    + G   A     I+P          
Sbjct: 185 KVKAVRDNEIAARAQGINTNLVKIQAFVLSAVIPAVLGGINAYWITFINPQSVLNTLITD 244

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            ++ +V++GG+      A     +  + E                       +  ++   
Sbjct: 245 QLVVMVLVGGLGHAWGPALGATAMFLLQEQLR------------VSYGETTAYIIIVGAI 292

Query: 328 LFLVILMRSHSLLRL 342
           + L++L     L+ L
Sbjct: 293 VMLIVLFLPDGLVSL 307


>gi|163852906|ref|YP_001640949.1| inner-membrane translocator [Methylobacterium extorquens PA1]
 gi|163664511|gb|ABY31878.1| inner-membrane translocator [Methylobacterium extorquens PA1]
          Length = 347

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 67/315 (21%), Positives = 127/315 (40%), Gaps = 16/315 (5%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRY 88
           +  T +  + +++ I  LI  +   GL++ +G  G  SL      A+GAY+   +L    
Sbjct: 38  IPLTATDYWYNAILIPFLIMALAGLGLNLTMGYAGQASLGTGAFMAVGAYATYNLLLRLP 97

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            L + + +    +I+GA G+++GLPSL+ +G YL   TL    + + +  +    +N  +
Sbjct: 98  ELPLPVSLAGGGLIAGAVGLVVGLPSLRIKGFYLIAPTLAAQFLIEWVFNQVGWFSNYAS 157

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
              ++                       +      Y + L    +   +   L  +    
Sbjct: 158 SSAISAPRLVFLGY-------------DLSSPAGRYALTLTSVTVVTVLAWRLVGSQTGR 204

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSENI 267
            WR +RD + A   +   +  AKLSAF V +A  G+AGA +A A    +    F    + 
Sbjct: 205 NWRAVRDGETAAAVIGVPVARAKLSAFFVGAAVSGVAGALWAFAYLGTVDARSFDLDRSF 264

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             + I+I+GG++SLS      A ++    L   ++  +    L      +     L    
Sbjct: 265 QAMFIIIIGGLSSLSGSFIGAAFIVLTPILLTHLSNAFLGGSLD-GGQLSNLQRILFGAL 323

Query: 328 LFLVILMRSHSLLRL 342
           +   ++   + L  L
Sbjct: 324 IIGFLIKEPNGLAAL 338


>gi|194289186|ref|YP_002005093.1| branched-chain amino acid ABC transporter [Cupriavidus taiwanensis
           LMG 19424]
 gi|193223021|emb|CAQ69026.1| putative Branched-chain amino acid ABC TRANSPORTER, membrane
           component [Cupriavidus taiwanensis LMG 19424]
          Length = 547

 Score = 96.9 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 80/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ S +              +     +        
Sbjct: 273 ITYGLIGVINMAHGEFLMIGAYATYVVQSLFRAHAPGAFDWYLPAALPASFLAAALVGFV 332

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         +        +     + +         +
Sbjct: 333 LER--LVLRHLYGRPLETLLATFGISLLLMQAVRTLFGAQNVEVANPAWMSGGFEWMPGL 390

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++L    + A     L RT +    R    N+     +          AFA 
Sbjct: 391 VIPYNRVVIILFALAVVAVAWAVLNRTRLGLFVRATTQNRTMAACVGVRTWQVDSYAFAF 450

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          +  I    +V+LGG+  L+        L  + + 
Sbjct: 451 GAGIAGLGGC--ALSQIGNVGPDLGQAYIIDSFMVVVLGGVGQLAGTIVGAFGLGILNKF 508

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                    L+++ + L I  R   L  L+  S  
Sbjct: 509 IEPFYGAVLAK-------------ILVLVLIVLFIQKRPQGLFALKGRSAE 546


>gi|13094153|dbj|BAB32742.1| putative ABC transporter subunit [Pseudomonas resinovorans]
          Length = 571

 Score = 96.9 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 111/285 (38%), Gaps = 4/285 (1%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            ++L  L  +    L   L +   + ++ S+  ++ IY M A  L +++G   ++S    
Sbjct: 281 RRVLIDLLCLATFALLPLLASLLHEPFLVSLFTRLAIYGMAAASLDLLIGYGAMISFGHA 340

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             + +G Y   ++G     ++ L     +  +     +  L    F      ++      
Sbjct: 341 AFFGLGGYVVGVIGFHTSQALPLWGWDGSNSALLVWPLSLLVCALFAVVVGYLSLRTSGV 400

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            F  I + +           ++    + G     L      P   +   +  YY+ LG+ 
Sbjct: 401 QFIMITLAF----GQMLYFVLSSLSLYGGDDGILLSERNTLPGIDLDNPVQFYYLCLGLL 456

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                    L  +      R ++ +++   SL    +  +L AF ++    G+AG  +A 
Sbjct: 457 VAWLLFCRRLVNSRFGYVLRGLKQSERRSISLGLHPLRYRLGAFVIAGVGGGLAGILWAN 516

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
               +SPDM  + ++  ++++VILGG+ +L       A+ +G+ +
Sbjct: 517 YAMFVSPDMGAWHKSGELMAMVILGGVGTLLGPVLGAAVYLGLEQ 561



 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 80/284 (28%), Gaps = 15/284 (5%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           +G+++L     Y +GA+                     +           P  +      
Sbjct: 1   MGVINLAHGAFYMVGAF----------CRPTPRPERLVLARRVGSGSSARPYTRCLSKPA 50

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           + A    +            +      I V                 F      ++Y + 
Sbjct: 51  SCAASTTAITSTRYWPTLAVVFFTNELITVLFGRSPPAMPTPEWYSSFVEVLPGLMYPVS 110

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
               +     ++ ++ L +  T +    R   D+ +   +L   I       F   S   
Sbjct: 111 RLLFIAAGAVVAIAMWLLINHTRLGMLIRAGADDHEMVGALGVNIARLYTLVFVFGSVLC 170

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+AG   A                I    ++++GG+ S+        ++  V  L     
Sbjct: 171 GLAGFMAAPLLSV--EIGMGEKVLITTFVVIVVGGVGSVRGALAGALLIGMVDGLGRAYI 228

Query: 303 FYYFNSLLKFDCSFNMRHTTL---MVIALFLVILMRSHSLLRLR 343
               + LL  + S  +    +     I + +V+L+R   LL  R
Sbjct: 229 PQLLDQLLPAEVSGTLSGGLISASAYIVMAVVLLVRPRGLLPAR 272


>gi|269121036|ref|YP_003309213.1| inner-membrane translocator [Sebaldella termitidis ATCC 33386]
 gi|268614914|gb|ACZ09282.1| inner-membrane translocator [Sebaldella termitidis ATCC 33386]
          Length = 300

 Score = 96.9 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 100/303 (33%), Gaps = 20/303 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++        +GAY+     ++Y + +   I V
Sbjct: 11  VINGLQVGSIYALIALGYTMVYGIVKLINFAHGDILMVGAYTAFTCVTKYNMPLIAAILV 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S M+    G+++   + K   +   I+ LI +      L     +  G     +      
Sbjct: 71  SVMVCSLLGVLIDRLAYKPLRNSPRISALITAIGVSFFLESVFLVFQGADSKVIPQDKIP 130

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +  +           +         +         +  +++ T +  A R + ++  
Sbjct: 131 FYLSSAT------ISIGSLKVSYLTLVTIFSTIICMLVLNFFIKNTKLGKATRAVSEDHN 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA   + G  ++ +  +I P M      +      + GG+
Sbjct: 185 AARLMGINVNSTISITFAIGSALGALGGVLYSLTYPQIEPYM-GMMPGLKAFIAAVFGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  +           + +++ F               L L+++ +   
Sbjct: 244 GSIPGAMIGGYLMGLIENFSKAYISSTWANVIVFG-------------ILILILVFKPSG 290

Query: 339 LLR 341
           L  
Sbjct: 291 LFG 293


>gi|332202615|gb|EGJ16684.1| branched-chain amino acid transport system / permease component
           family protein [Streptococcus pneumoniae GA41317]
          Length = 318

 Score = 96.9 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 77/325 (23%), Positives = 137/325 (42%), Gaps = 42/325 (12%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L+ + +       +   +  QI I ++ A GL+++VG  G  SL      AIGAY+  I+
Sbjct: 21  LISVLVSVGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80

Query: 85  G--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           G  S    + +  + V A++SGA  +++G+P+L+ +GDYLA+ATL +SEI +  +I    
Sbjct: 81  GSKSPTYGAFFGAMLVGALLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +TNG AGI                                    +     ++    L   
Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+  A     + P  + 
Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  +I V+ IV+ GG+ S++    +  +L  +  L   +                     
Sbjct: 236 FINSINVLIIVVFGGLGSITGAVVSAIVLGILNMLLQDV---------------ASVRMI 280

Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347
           +  +AL LV++ R   LL     S 
Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305


>gi|17548927|ref|NP_522267.1| amino-acid composite ATP-binding transmembrane ABC transporter
           protein [Ralstonia solanacearum GMI1000]
 gi|17431177|emb|CAD17857.1| probable amino-acid composite atp-binding transmembrane abc
           transporter protein [Ralstonia solanacearum GMI1000]
          Length = 608

 Score = 96.9 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 50/309 (16%), Positives = 113/309 (36%), Gaps = 20/309 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L++   +     +   LL  L        ++  ++   I +Y + A GL ++ G  GL S
Sbjct: 17  LSRNRLLTAAFVIGLALLPVLPTP-----EFWITLLNYIGLYSLVALGLVLLTGVGGLTS 71

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                   +GAYS   L ++YGLS W+ +     I+ A   ++GL +++  G YL +AT+
Sbjct: 72  FGQAAFVGLGAYSTAYLSTQYGLSPWIGLLAGLAITVASAYVIGLITMRMSGHYLPLATI 131

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                   +      +                     + I         +     M+Y++
Sbjct: 132 AWGLSLFFLFGNLAFL---------------GKYDGLNGIPVLNLLGKPLQTGREMFYLI 176

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  ++   +  L  +    A R ++       ++     + K+  F  ++    ++G 
Sbjct: 177 WAVVVVAVLAVQNLLNSRPGRAIRALKGGGTMAEAMGVNTAWMKVVIFVAAAILACISGF 236

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A  +  ++P  F  +  I  + + ++GG+  +        +L  + +    +      
Sbjct: 237 LYAHLQRAVNPTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGLLTILKDSLQNLLPKLLG 296

Query: 308 SLLKFDCSF 316
           S   F+   
Sbjct: 297 STGNFEIIV 305


>gi|254437153|ref|ZP_05050647.1| amino acid or sugar ABC transport system, permease protein,
           putative [Octadecabacter antarcticus 307]
 gi|198252599|gb|EDY76913.1| amino acid or sugar ABC transport system, permease protein,
           putative [Octadecabacter antarcticus 307]
          Length = 366

 Score = 96.5 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 69/340 (20%), Positives = 128/340 (37%), Gaps = 32/340 (9%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------YG 89
           Y  S+     IY +FA GL++  G  GL ++  V   A+GAY+Y +L +         +G
Sbjct: 10  YFLSLLTVGGIYAIFALGLNVNWGFAGLFNVGIVGFAAVGAYTYALLTTAESTFHIGGFG 69

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L +   +    M S     ++GL  ++ R DYLAIAT+ ++EI + IL     ITNG  G
Sbjct: 70  LPLPFGMFAGMMTSAVIAGLIGLICIRLRADYLAIATIGIAEIIKLILKNETEITNGPRG 129

Query: 150 IYVADRLY-------------FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           I    R +                         F        ++      +L + ++   
Sbjct: 130 INKIPRAWEHFSEERFYSSWPMSWFGTPENWEAFFDTLPNWYWQPLFAGTILLVMYVIYR 189

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++   R +        IR+N+ A  +    +   ++ AF + +A +G+AG+ FA     I
Sbjct: 190 MLERARTSPWGRMMTAIRENEPAARAAGKDVTRRRIEAFIIGAAIMGLAGSLFAQHLRLI 249

Query: 257 SPDMFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            P           +V  ++I+GG  +         ++  +      +     N +     
Sbjct: 250 EPTNTFDPSKVTFLVWVMLIVGGSGNNRGAMLGAFLIWTLWSASELIITGAINLIGDIFS 309

Query: 315 SF---------NMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           +                L+ I + +++      +L    P
Sbjct: 310 TLDPSILQTRAGFLRMMLIGILMQVILQRYPGGILPEVRP 349


>gi|295091908|emb|CBK78015.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           (TC 3.A.1.4.-) [Clostridium cf. saccharolyticum K10]
          Length = 330

 Score = 96.5 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 70/312 (22%), Positives = 129/312 (41%), Gaps = 31/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +  + + +  YV+ A  L++ VG LG LSL       +GA+S     +    +  +    
Sbjct: 5   LKGILVPLCTYVILAVSLNLTVGILGELSLGHAGFMCVGAFSGAFFTNAMMKTFGIAKND 64

Query: 99  SAMISGACG--------------MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
              I G                 +++G+P L+ +GDYLAI TL   EI +N++       
Sbjct: 65  DMAILGLFIVAIVIGAAVAAVFGILIGIPVLRLKGDYLAIVTLAFGEIIKNLINALFVGI 124

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
           + +   +       L       +            +   + + + +  L+  I+  L  +
Sbjct: 125 DSRGIHFSLKDAASLNLEGGGEVIIKGAQGISGTPKAATFTIGIILVLLTLFIVQNLIHS 184

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR--ISPDMFK 262
               A   IRDN+ A  S+   I   KL AF+VS+A  G+AG  +A +      +P  F 
Sbjct: 185 RTGRAIMAIRDNRIAAESVGINITKYKLLAFSVSAALAGVAGVLYAHNLATLAATPKAFG 244

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           ++ +I+++  V+LGG+ ++     A  IL  + EL  G++ Y                  
Sbjct: 245 YNMSIMILVFVVLGGIGNIRGSIIAAVILTLLPELLRGLSSY---------------RML 289

Query: 323 LMVIALFLVILM 334
           +  I L +++L+
Sbjct: 290 IYAIVLIVMMLL 301


>gi|332523408|ref|ZP_08399660.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus porcinus str. Jelinkova 176]
 gi|332314672|gb|EGJ27657.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus porcinus str. Jelinkova 176]
          Length = 317

 Score = 96.5 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 69/337 (20%), Positives = 131/337 (38%), Gaps = 42/337 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K      ++     L L   +       Y   + + I I ++ A G ++V+G  G   L 
Sbjct: 6   KSLGTWLIMMTCLFLALSFLINGGLLGPYHVQILMGIGISIIMAMGTNLVLGFSGQFPLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I  +        ++ + +  +++G   +I+G P+L+ +GDYLAIATL
Sbjct: 66  QAGFMAIGAYATAIFTNYMPTYLGFYISMLLGVLVAGVLAIIVGFPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++EI +  ++    ITNG AG+    R                               +
Sbjct: 126 GVAEIIRIAIVNGGDITNGAAGLTGILRYSTWPV-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                  A  +L   R+++     ++R+N+ A  S+       K+  FA ++    +AG+
Sbjct: 161 FVFVVFIAVAMLNFLRSSVGRQVISVRENEIAAESMGVNTTKIKVLTFAFAAMTASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +      + P  F    +I  + I +LGG+ S++    A  +L  +             
Sbjct: 221 LYVGYIGTVVPKDFTIMRSIDYLIIAVLGGLGSMTGTILAAIVLGVLNMYLQSF------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                    +     +  IAL LV++ +   L+  + 
Sbjct: 275 ---------SDIRMIIYSIALILVMVFKPGGLMGTKE 302


>gi|300691047|ref|YP_003752042.1| high-affinity branched-chain amino acid transport system permease
           (livH or livM) [Ralstonia solanacearum PSI07]
 gi|299078107|emb|CBJ50750.1| putative high-affinity branched-chain amino acid transport system
           permease (livH or livM) [Ralstonia solanacearum PSI07]
          Length = 547

 Score = 96.5 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ + +              +     +        
Sbjct: 273 ITYGLIGVINMAHGEFLMIGAYATYVVQTIFRNHFPGAFDWYLPAALPAAFLAAAVVGFA 332

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                ++   +     + +L  +         +        +     S +         +
Sbjct: 333 LER--SVLRHLYGRPLETLLATFGVSLLLMQAVRSLFGAQNVEVANPSWMSGGIALYPGL 390

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     + A     L RT +    R    N+     +          AFA 
Sbjct: 391 ILPYNRLVILAFALVVVAMAWAVLNRTRLGLFVRATTQNRAMAACVGVRTWKVDSYAFAF 450

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  L+        L  + + 
Sbjct: 451 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTIIGAFGLGLINKF 508

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   L  L+  S  
Sbjct: 509 IEPFYGAVLAK-------------IFVLVLIVLFIQKRPQGLFALKGRSAE 546


>gi|91977974|ref|YP_570633.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91684430|gb|ABE40732.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 542

 Score = 96.5 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 92/297 (30%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++      S   L   S +I+     ++ 
Sbjct: 263 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQEVIRTSYPALFDYSLLIAVPLAFLVA 322

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                      ++   +     + +L  W      +  +              S      
Sbjct: 323 GAIGVLIER--SVIRFLYGRPLETLLATWGLSLILQQAVRTLFGPTNREVGNPSW-MSGA 379

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++L     + A ++  LR TA+    R +  N++   S+        
Sbjct: 380 FELGQITITYNRLWILCFTLAVFAILLAMLRYTALGLEMRAVTQNRRMAASMGIATSRVD 439

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   A S+          S  I    +V+ GG+ +L         L
Sbjct: 440 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFSL 497

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +    +                      +++ + L I  R   L  L+  +  
Sbjct: 498 GIANKFLEPVAGAVLAK-------------IAILVLIILFIQKRPRGLFALKGRAVE 541


>gi|319764575|ref|YP_004128512.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|317119136|gb|ADV01625.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
          Length = 345

 Score = 96.5 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 77/322 (23%), Positives = 134/322 (41%), Gaps = 17/322 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A +      L L    +  Y   M   + I V  + GL+I+ G  GL+SL       +GA
Sbjct: 24  AWLIIAAALLLLFPFAASDYWLYMACLVAINVASSTGLNILTGYTGLVSLGQAAFMGLGA 83

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL +R G    L +    +++   G+++G+PSL+ +G YLAIAT+  S I   +  
Sbjct: 84  YTVAILQTRLGTPFLLNLLAGGVVAMLGGIVVGIPSLRVKGLYLAIATIAASFIAHFLFA 143

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            ++ IT G AGI +                  R     +     +Y++++ +  L     
Sbjct: 144 NFQ-ITGGTAGISMPPA---------------RLLGMDLDTSFRLYWLIVPVTLLMLLGA 187

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L RT I  A+  IRD   +   L   ++  KL +F +SS + G+AG  +A     ++P
Sbjct: 188 ANLFRTRIGRAFIAIRDRDISAEVLGIPLLRYKLLSFGLSSFYAGIAGGLWAYFFRVVTP 247

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F  S +I  ++ +I+GGM S+         +  V EL   +               + 
Sbjct: 248 ESFPLSMSIFFLAAIIVGGMGSILGGIFGAVFMTMVPELLKLIVD-LLPGGAALAVFLSP 306

Query: 319 RHTTLMVIALFLVILMRSHSLL 340
               +    +   ++     L 
Sbjct: 307 VRLIVFGALIIGFLVFEPLGLA 328


>gi|296110586|ref|YP_003620967.1| hydrophobic amino acid uptake (HAAT) family ABC
           transporter,permease protein LivM [Leuconostoc kimchii
           IMSNU 11154]
 gi|295832117|gb|ADG39998.1| hydrophobic amino acid uptake (HAAT) family ABC
           transporter,permease protein LivM [Leuconostoc kimchii
           IMSNU 11154]
          Length = 324

 Score = 96.5 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 83/340 (24%), Positives = 143/340 (42%), Gaps = 43/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           KY      LA++  +L+ +         Y  +  + I I ++ A GL++++G  G  SL 
Sbjct: 7   KYTLSWATLALMIVILIVVMTMFDIIGPYGLTTIVLIGINLIAAIGLNLIIGMSGQFSLG 66

Query: 70  CVIAYAIGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  ++ +         + + V AM+SG   +I+G+P+L+ RGDYLAIATL
Sbjct: 67  HAGFMAIGAYATALIVTSVPTIFGFIISLLVGAMLSGIVALIVGIPTLRLRGDYLAIATL 126

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + +++ +K                                  F I     + ++
Sbjct: 127 GVSEIIRILIMNFKFTRG--------------------------PAGIFAIPSFVTWPLV 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
            G+  L+  I++ L R+ I  A   +RDN+ A  SL       K+ AF + +    +AG 
Sbjct: 161 FGLAVLTIIIVVNLVRSPIGRAIIAVRDNEIAAESLGINTTKYKVIAFVLGAVLAALAGG 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A+    +SP  F F ++I ++ IV+LGG+ S+S        L  +  +          
Sbjct: 221 LRASFIQSVSPQDFTFMQSITILIIVVLGGIGSISGTVVTAVALGILDVILQNF------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  + L +V+L R   L      S 
Sbjct: 275 ---------GSLRMVVYAVVLIVVMLFRPQGLFGRSEFSL 305


>gi|239624770|ref|ZP_04667801.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521156|gb|EEQ61022.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 299

 Score = 96.5 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 60/309 (19%), Positives = 119/309 (38%), Gaps = 41/309 (13%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           YI+ + I   I ++   GL I+ G  GL S+       +GAY+  IL   Y +   + + 
Sbjct: 3   YIEGITISTCINIVCVCGLVILTGYTGLFSMGHACFMCLGAYASAILTKYYSVPFLIALL 62

Query: 98  VSAMISGACGMIMGLPSLKFRGDY--LAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           V   ++G   +++G+P+L+ +      AIATL   E  + I+        G         
Sbjct: 63  VGGAVAGLLSLVIGVPTLRGKMSADCFAIATLGFGEAVRIIMSNISHPYFG--------- 113

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                 I         +G+   +  + +   R+        IRD
Sbjct: 114 ---------------GARGMSGIMPYTTLPWAVGLALAAIILTINYARSQHGRIALAIRD 158

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +Q A   +   +   K+ +   S+ F G+ G   A     + P++F  + +  +++ V+L
Sbjct: 159 HQDASELIGVNVFHEKIKSLVYSAFFCGVGGGMMAHYYTYMVPNVFNATVSNNLLTSVVL 218

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG++S++  +  TAIL    E+   +               +     +  + L +++ +R
Sbjct: 219 GGVSSVTGPSLGTAILTFTPEVLRFL---------------SNWRLAIYGLVLVIIMRVR 263

Query: 336 SHSLLRLRT 344
              LL  + 
Sbjct: 264 PEGLLGYKE 272


>gi|221639726|ref|YP_002525988.1| ABC branched chain aminoacid transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
 gi|221160507|gb|ACM01487.1| ABC branched chain aminoacid transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
          Length = 642

 Score = 96.5 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 97/303 (32%), Gaps = 26/303 (8%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLIPVSAMISG 104
           IY + A GL+I  G + ++++       +GAY+  +     S Y +SI + +P++  ++ 
Sbjct: 361 IYFLAAIGLAITFGVMRVINMAHGEFIMMGAYTGYVVQQWISDYTISILVALPLAFAVTF 420

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
           A G+ M    +        + TL+ +      L +      G     +            
Sbjct: 421 AAGVAMERLVI-RHLYRRPLETLLATFGISIALQQLAKNIFGTQARPLTAPA-------- 471

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
             +      +  V        + +         +  + RT +    R +  N     S+ 
Sbjct: 472 -WLDGALSFNDVVSISYIRIAIFVLAMIFLGVFLFIMTRTRLGLEVRAVTQNPSMAASMG 530

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                  +  F + S   G+AG          S     +         V++GG+ ++   
Sbjct: 531 INPDRINMLTFGLGSGIAGIAGVAIGLFAKVTSELGQDYIVQS--FMTVVVGGVGNIWGT 588

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
               A++ GV +    +N     +   +   F +                R   ++ L+ 
Sbjct: 589 LAGAAMIGGVQKGIEWLNPSNTLAAQTYMILFIIIFIQF-----------RPRGIVALKG 637

Query: 345 PSN 347
            + 
Sbjct: 638 RAA 640


>gi|39936783|ref|NP_949059.1| putative branched-chain amino acid transport system permease
           [Rhodopseudomonas palustris CGA009]
 gi|39650640|emb|CAE29163.1| putative branched-chain amino acid transport system permease
           protein [Rhodopseudomonas palustris CGA009]
          Length = 339

 Score = 96.5 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 73/319 (22%), Positives = 133/319 (41%), Gaps = 30/319 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             ++L L L    ++ +I      +LIY +    L+I+ G  G  SL     YA+GAY+ 
Sbjct: 30  IVVVLLLCLAPLVAKNFIIFQMTMVLIYAIAVLALNILTGGSGQFSLGQSAFYAVGAYTS 89

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL--IK 139
            IL   +G++  L +P+S  I   CG + GLP+L+  G YLA+AT  ++     +L    
Sbjct: 90  AILMENFGVNYALTLPISGAICFICGYLFGLPALRLSGIYLALATFALATAMPQLLKLHY 149

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           ++  T G  G+ +       G  +   +               +YY +L +        +
Sbjct: 150 FEHWTGGVQGLVITKPDAPFGLPMSQDMW--------------LYYFVLVVSMAIYVASV 195

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L ++    A   IRDN+ A  ++   +   K  AF +S+   G+AG   A +   ++PD
Sbjct: 196 NLLKSRSGRAMMAIRDNEIAASAMGVDVARYKTLAFGISAGITGVAGGLGAIAVQFVAPD 255

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            +     I +   +++GG+  L       A ++ V  +  G +     +           
Sbjct: 256 SYTIQLAIALFLGMVVGGVGWLPGSIVGAAFIVFVPNIAEGFSKGLSGA----------- 304

Query: 320 HTTLMVIALFLVILMRSHS 338
              +  + L L+I +  H 
Sbjct: 305 ---VFGVILVLIIFLLPHG 320


>gi|315221924|ref|ZP_07863835.1| amino acid or sugar ABC transport system, permease protein
           [Streptococcus anginosus F0211]
 gi|315188890|gb|EFU22594.1| amino acid or sugar ABC transport system, permease protein
           [Streptococcus anginosus F0211]
          Length = 316

 Score = 96.5 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 83/340 (24%), Positives = 147/340 (43%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + +  +L +    LL L + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNILWFVLLLAGYGLLTLLVSAGVLNDFYLQILQQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILGSR--YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+GS+     + +  + + A+I+GA  +I+G+P+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYAAAIIGSKSATYPAFFAAMVLGALIAGAVALIVGIPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + ++I    +TNG AGI                                    +
Sbjct: 126 GVSEIIRILIINGGDLTNGAAGILGIPAFTNWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++  + +   R+ I  A  ++R+++ A  S+       K+ AF   +    +AG+
Sbjct: 161 YFFVVMTTILTINFLRSPIGRATLSVREDEIAAESVGVNTTKIKVIAFVFGAMTASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F  +I V+ IV+ GG+ S++    A  +L  +  +   +      
Sbjct: 221 LQAGFIGSVVPKDYTFINSINVLIIVVFGGLGSMTGTIVAAIVLGILNMVLQNV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  +AL LV++ R   LL     S 
Sbjct: 275 ---------ASIRMIIYSLALILVMIFRPGGLLGTWELSL 305


>gi|194291182|ref|YP_002007089.1| branched-chain amino acid ABC transporter permease/ATP-binding
           protein [Cupriavidus taiwanensis LMG 19424]
 gi|193225017|emb|CAQ71028.1| putative branched-chain amino acid transport system permease,
           ATP_binding component [Cupriavidus taiwanensis LMG
           19424]
          Length = 615

 Score = 96.5 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 55/311 (17%), Positives = 123/311 (39%), Gaps = 22/311 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               + ++  ++G  I +Y + A GL ++ G  G+ S        +GAYS   L +++GL
Sbjct: 42  PVLPTPEFWITLGNYIGLYSIVAIGLVLLTGVGGMTSFGQAAFVGLGAYSTAYLTTQFGL 101

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S W  + V  +I+ A   ++GL +++  G YL +AT+        +    + +     G+
Sbjct: 102 SPWFGLLVGLVITMASAYVIGLITMRMSGHYLPLATIAWGLSLFFLFGNLEFL-GKYDGL 160

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                L F G  ++S                 M+Y++  +  L+   +  L  +    A 
Sbjct: 161 NGIPVLSFFGIELQS--------------GRSMFYLIWAVVLLAVLAMQNLLNSRPGRAI 206

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R ++       ++     + K+  F V++    ++G  +A  +  ++P  F  +  I  +
Sbjct: 207 RALKGGGVMAEAMGVNTAWMKVVIFVVAAILACVSGFLYAHLQRAVNPTPFGLNYGIEYL 266

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            + ++GG+  +        IL  + ++  G+      +   F          +  + L L
Sbjct: 267 FMAVVGGVGHVWGAVLGAGILTILKDVLQGVLPKLLGANGNF-------EIIVFGVLLVL 319

Query: 331 VILMRSHSLLR 341
           ++      +  
Sbjct: 320 LLQYARDGIWP 330


>gi|283954567|ref|ZP_06372086.1| branched-chain amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 414]
 gi|283793971|gb|EFC32721.1| branched-chain amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 414]
          Length = 349

 Score = 96.5 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 76/355 (21%), Positives = 135/355 (38%), Gaps = 47/355 (13%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L  +   ++F+F+       Y  ++  QI I+++ A   +++ G  G  SL      AIG
Sbjct: 9   LIFLIVSIVFIFISPYIFGDYGLNIINQIAIFIILAVSYNLINGVTGQFSLEPNGFVAIG 68

Query: 78  AYSYVI--------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           AY+  +                    + + +  S  L + V  + S    +I+     + 
Sbjct: 69  AYTAALVLLSTDAKNDQFFLDGPSSFILAIHSNSFILALIVGGICSSLLALILSFAVFRV 128

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL    I +   I +  ITNG  G+    +                      
Sbjct: 129 RGDYLAIVTLGFGIIIKIAAINFPSITNGSRGLVDIPQFS-------------------- 168

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                  Y   G+  ++  +IL +  +    A + IRD++ A  ++   I + K  AF+ 
Sbjct: 169 -----TVYWTGGIAIVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINIFWIKTLAFST 223

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           S+   G+ G   A     +SP  F F     ++ I++LGG+ S +       ++IG  E 
Sbjct: 224 SAFLEGVGGGLLACLLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAVIGAILVIGGSEW 283

Query: 298 CCGMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              ++       SL     S       +  I L LV+L     ++     S+ + 
Sbjct: 284 LRFLDELNIKIDSLNLDIQSTPGFRMVVFSIVLVLVMLFARKGIMGYYELSDVIR 338


>gi|33596654|ref|NP_884297.1| high-affinity branched-chain amino acid transport system permease
           protein [Bordetella parapertussis 12822]
 gi|33573355|emb|CAE37339.1| high-affinity branched-chain amino acid transport system permease
           protein [Bordetella parapertussis]
          Length = 345

 Score = 96.5 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 69/322 (21%), Positives = 124/322 (38%), Gaps = 17/322 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  LL  L L    +  Y   +   + I+V  A GL+I+ G  GL+SL       +GA
Sbjct: 24  VWLALLLAALALFPFLANAYWLYLACLVAIHVASATGLNILTGYTGLVSLGQAAFMGLGA 83

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L    G    L +  +  +    G+++G+PSL+ +G YLAI T+  S I   +  
Sbjct: 84  YTVAVLEVHVGTPALLNLLAAGAVVMLGGLVVGVPSLRVKGLYLAIVTIAASFIAHFLFA 143

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                           RL                    +     +Y++++ +  L     
Sbjct: 144 NLPLTGGTAGLQVPPARL----------------LGVDLDTSFKIYWLIVPITVLMVLGA 187

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L RT I  A+  IRD   +   L   ++  KL +F +SS + G+AG  +A     ++P
Sbjct: 188 ANLFRTRIGRAFIAIRDRDISAEVLGIDLLRYKLLSFGLSSFYAGVAGGLWAYFFRVVTP 247

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F    +I  ++ +I+GGM S+         +  V E    +   +           + 
Sbjct: 248 ESFPLIMSIFFLAAIIVGGMGSILGAILGAVFMTMVPEFLK-LVVGWLPVGDDALGLLSP 306

Query: 319 RHTTLMVIALFLVILMRSHSLL 340
             T +    +   ++     L 
Sbjct: 307 VRTIVFGALIVGFLIFEPLGLA 328


>gi|120612150|ref|YP_971828.1| inner-membrane translocator [Acidovorax citrulli AAC00-1]
 gi|120590614|gb|ABM34054.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 526

 Score = 96.5 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 89/296 (30%), Gaps = 17/296 (5%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       IGAY+  ++   +   +        + +     +  
Sbjct: 247 VALGLAITYGLMGVINMAHGELMMIGAYATYVVQGLFQRYLPGAFDAYLVAAVPVAFLAS 306

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       +   +     + +L  W      +  +        +G    + +    
Sbjct: 307 ALMGAVLER--GVIRFLYGRPLETLLATWGISLMLQQLVRSVFGAQNVGVENPAWMSGGV 364

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                +        +++    +   +   + RT +    R +  N+     +        
Sbjct: 365 QVLENLQLPWNRLVIVVFAFAVLGGVAFLIGRTRLGLFVRGVTQNRPIASCMGVNTARVD 424

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
             AFA+ S   G+AG   A S+             +    +V+LGG+  L+    A   L
Sbjct: 425 TYAFALGSGIAGLAGC--ALSQVGNVGPDLGQGYIVDAFMVVVLGGVGQLAGTVYAALGL 482

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
             + +   G                       +++ + + I  R   +  ++  + 
Sbjct: 483 GVLNKFLEGWAGAVLAK-------------IAVLVLIIVFIQKRPQGIFAVKGRAA 525


>gi|296134156|ref|YP_003641403.1| inner-membrane translocator [Thermincola sp. JR]
 gi|296032734|gb|ADG83502.1| inner-membrane translocator [Thermincola potens JR]
          Length = 350

 Score = 96.5 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 72/356 (20%), Positives = 135/356 (37%), Gaps = 45/356 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   ++  L  +  L + ++        Y   +     IYV+ A  +++V G  GL SL 
Sbjct: 2   KKRDLILTLVSLILLFVCVYFADAYLDSYKVRILNLCAIYVILALSMNLVNGFTGLFSLG 61

Query: 70  CVIAYAIGAYSYVILGSRY-------------------GLSIWLLIPVSAMISGACGMIM 110
                A+GAY+  +L                        L     + ++ ++S   G ++
Sbjct: 62  HAGFMAVGAYTTALLTMPPLVKAQNFFMAPLIKPLDSITLPFLPALLIAGVLSALVGFLI 121

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
           G P+L+ +GDYLAIATL  +EI + I    + +TNG  G+                    
Sbjct: 122 GAPALRLKGDYLAIATLGFAEIIRVIFTNTQSLTNGALGLKGIPVTTN------------ 169

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                         +   G+  ++  +I  L  ++   A + IR+++ A  S+   I   
Sbjct: 170 -------------LWWSFGIAVITVILIGSLINSSFGRALKAIREDEIAAESMGINIFRH 216

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           K+ +F + + F G+ G         + P MF+F     ++ I+ILGGM S++    +  I
Sbjct: 217 KVLSFTIGAFFAGIGGGLLGNLLGTVDPLMFRFFLTFNILLIIILGGMGSITGSIISAFI 276

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
           +    E    ++       L            +    L +V+L     ++     +
Sbjct: 277 ITIAGEALRFLDESITIGSLYIP-GIPGLRMVVFSALLMVVVLFFRQGIMGTNEFT 331


>gi|294084500|ref|YP_003551258.1| inner-membrane translocator [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664073|gb|ADE39174.1| inner-membrane translocator [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 362

 Score = 96.5 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 76/344 (22%), Positives = 152/344 (44%), Gaps = 32/344 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L +  ++L  L     LL   F+ +    +Y+ ++  +  ++++ A GL+IV G  G ++
Sbjct: 18  LARKHRLLPWLLAYIALLPLPFILSFLFSEYLINLANRACLFILLAVGLNIVKGFCGQVT 77

Query: 68  LNCVIAYAIGAYSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           +  +  YAIGA +  I             +GLS+W+ IP++ +++   G+I+GLPS++  
Sbjct: 78  VGHIGLYAIGAVTSAILALEPGSFGDTWGFGLSVWVAIPIAVLVTALAGVIVGLPSVRLE 137

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           G YLA+ATL + E  + I+I   P      G+ +       G    S             
Sbjct: 138 GAYLALATLGLGESVR-IMIAVTPQLGSSTGLMMIPPPSVGGFAFESFT----------- 185

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                YY+++    +       + R+A   A++ IR++  A       ++  KL AF +S
Sbjct: 186 ---SYYYLVMTAAVIGIYFSFAILRSATGRAFQAIREDTIAASVNGINVVKYKLLAFVLS 242

Query: 239 SAFIGMAGAFFAASRD-RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           + + G+AGA FA      +  + F   E + ++ +V+LGG+ ++        ++    + 
Sbjct: 243 AVYAGLAGALFAHMPPGYLHHNNFTIIEMVTLLLMVVLGGIGNVWGGVIGAIVVTIAYDQ 302

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              + FY       F     +    +  +++ L++L     +  
Sbjct: 303 TKDLVFY-------FMDRPIIIQPIVFGLSMVLLVLFMPRGIGG 339


>gi|170747862|ref|YP_001754122.1| urea ABC transporter, permease protein UrtB [Methylobacterium
           radiotolerans JCM 2831]
 gi|170654384|gb|ACB23439.1| urea ABC transporter, permease protein UrtB [Methylobacterium
           radiotolerans JCM 2831]
          Length = 523

 Score = 96.5 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 53/322 (16%), Positives = 107/322 (33%), Gaps = 21/322 (6%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              LGA ++  Y  S+G    + ++ A GL+I  G +G++++       +GAY+  ++  
Sbjct: 222 LAILGALQNVWYGISLG---SVLLLAAIGLAITFGVMGVINMAHGEMVMLGAYTTYLVQE 278

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
                   L   S  IS  C  ++          ++     +     + +L  +      
Sbjct: 279 LIRTKAPSLFGWSLAISIPCAFLVAGLVGVLIERFI--IRFLYGRPLETLLATFGVSLAL 336

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
           + G+              +      F    +       ++++    +   ++  LRRT+ 
Sbjct: 337 QQGVRTIFGPTNREVGAPAF-MSGAFDLYGLSITWGRMWIIVFALAVFLGLLFVLRRTSF 395

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R +  N++   ++     +     F + S   GMAG   A S+             
Sbjct: 396 GLKTRAVTQNRRMAAAMGIRTPYVDALTFGLGSGIAGMAGV--ALSQIDNVSPNLGQGYI 453

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I    +V+ GG+ SL     A   L  V +L           +              ++I
Sbjct: 454 IDSFLVVVFGGVGSLWGTLVAALTLGVVNKLAEPYIGAVLAKIG-------------LLI 500

Query: 327 ALFLVILMRSHSLLRLRTPSNF 348
            + L I  R   L  L+  +  
Sbjct: 501 FIILFIQKRPRGLFALKGRAVE 522


>gi|15900646|ref|NP_345250.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae TIGR4]
 gi|15902705|ref|NP_358255.1| branched chain amino acid ABC transporter permease [Streptococcus
           pneumoniae R6]
 gi|111658357|ref|ZP_01409045.1| hypothetical protein SpneT_02000497 [Streptococcus pneumoniae
           TIGR4]
 gi|116516639|ref|YP_816148.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae D39]
 gi|148985899|ref|ZP_01818993.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71]
 gi|148992413|ref|ZP_01822108.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP9-BS68]
 gi|148997173|ref|ZP_01824827.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP11-BS70]
 gi|149003366|ref|ZP_01828255.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP14-BS69]
 gi|149007630|ref|ZP_01831247.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP18-BS74]
 gi|168488419|ref|ZP_02712618.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae SP195]
 gi|168575410|ref|ZP_02721346.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae MLV-016]
 gi|169832760|ref|YP_001694213.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae Hungary19A-6]
 gi|182683671|ref|YP_001835418.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae CGSP14]
 gi|221231547|ref|YP_002510699.1| branched-chain amino acid transport system permease protein
           [Streptococcus pneumoniae ATCC 700669]
 gi|225856427|ref|YP_002737938.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae P1031]
 gi|225860725|ref|YP_002742234.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae Taiwan19F-14]
 gi|237650406|ref|ZP_04524658.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae CCRI 1974]
 gi|237822481|ref|ZP_04598326.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae CCRI 1974M2]
 gi|298230938|ref|ZP_06964619.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298255819|ref|ZP_06979405.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502536|ref|YP_003724476.1| branched chain amino acid ABC superfamily transporter membrane
           protein [Streptococcus pneumoniae TCH8431/19A]
 gi|303255834|ref|ZP_07341875.1| branched-chain amino acid transport system permease protein
           [Streptococcus pneumoniae BS455]
 gi|303260015|ref|ZP_07345989.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP-BS293]
 gi|303261421|ref|ZP_07347369.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP14-BS292]
 gi|303264088|ref|ZP_07350009.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae BS397]
 gi|303266299|ref|ZP_07352190.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae BS457]
 gi|303269540|ref|ZP_07355304.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae BS458]
 gi|307067354|ref|YP_003876320.1| branched-chain amino acid ABC transporter permease [Streptococcus
           pneumoniae AP200]
 gi|307127698|ref|YP_003879729.1| branched chain amino acid ABC transporter membrane-spanning
           permease [Streptococcus pneumoniae 670-6B]
 gi|14972225|gb|AAK74890.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae TIGR4]
 gi|15458247|gb|AAK99465.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae R6]
 gi|116077215|gb|ABJ54935.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae D39]
 gi|147756873|gb|EDK63913.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP11-BS70]
 gi|147758549|gb|EDK65547.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP14-BS69]
 gi|147760785|gb|EDK67756.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP18-BS74]
 gi|147922045|gb|EDK73169.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71]
 gi|147928730|gb|EDK79743.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP9-BS68]
 gi|168995262|gb|ACA35874.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae Hungary19A-6]
 gi|182629005|gb|ACB89953.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae CGSP14]
 gi|183573068|gb|EDT93596.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae SP195]
 gi|183578456|gb|EDT98984.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae MLV-016]
 gi|220674007|emb|CAR68520.1| branched-chain amino acid transport system permease protein
           [Streptococcus pneumoniae ATCC 700669]
 gi|225724713|gb|ACO20565.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae P1031]
 gi|225727651|gb|ACO23502.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238131|gb|ADI69262.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus pneumoniae
           TCH8431/19A]
 gi|301799768|emb|CBW32337.1| branched-chain amino acid transport system permease protein
           [Streptococcus pneumoniae OXC141]
 gi|301801598|emb|CBW34296.1| branched-chain amino acid transport system permease protein
           [Streptococcus pneumoniae INV200]
 gi|302597218|gb|EFL64323.1| branched-chain amino acid transport system permease protein
           [Streptococcus pneumoniae BS455]
 gi|302637555|gb|EFL68042.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP14-BS292]
 gi|302638934|gb|EFL69395.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP-BS293]
 gi|302640925|gb|EFL71308.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae BS458]
 gi|302644229|gb|EFL74485.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae BS457]
 gi|302646493|gb|EFL76719.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae BS397]
 gi|306408891|gb|ADM84318.1| ABC-type branched-chain amino acid transport system, permease
           component [Streptococcus pneumoniae AP200]
 gi|306484760|gb|ADM91629.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae 670-6B]
 gi|327390108|gb|EGE88451.1| branched-chain amino acid transport system / permease component
           family protein [Streptococcus pneumoniae GA04375]
 gi|332073123|gb|EGI83602.1| branched-chain amino acid transport system / permease component
           family protein [Streptococcus pneumoniae GA17570]
 gi|332076030|gb|EGI86496.1| branched-chain amino acid transport system / permease component
           family protein [Streptococcus pneumoniae GA41301]
 gi|332077167|gb|EGI87629.1| branched-chain amino acid transport system / permease component
           family protein [Streptococcus pneumoniae GA17545]
          Length = 318

 Score = 96.5 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 77/325 (23%), Positives = 137/325 (42%), Gaps = 42/325 (12%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L+ + +       +   +  QI I ++ A GL+++VG  G  SL      AIGAY+  I+
Sbjct: 21  LISVLVSVGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80

Query: 85  G--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           G  S    + +  + V A++SGA  +++G+P+L+ +GDYLA+ATL +SEI +  +I    
Sbjct: 81  GSKSPTYGAFFGAMLVGALLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +TNG AGI                                    +     ++    L   
Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+  A     + P  + 
Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  +I V+ IV+ GG+ S++    +  +L  +  L   +                     
Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVSAIVLGILNMLLQDV---------------ASVRMI 280

Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347
           +  +AL LV++ R   LL     S 
Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305


>gi|163858812|ref|YP_001633110.1| putative branched-chain amino acid transport permease [Bordetella
           petrii DSM 12804]
 gi|163262540|emb|CAP44843.1| putative branched-chain amino acid transport permease [Bordetella
           petrii]
          Length = 312

 Score = 96.5 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 60/328 (18%), Positives = 126/328 (38%), Gaps = 25/328 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            V   +L               +  ++L+  + A   +++VG  G+ S      + +GAY
Sbjct: 9   WVLWAVLLSMPYWMTLLGGYTDLASRLLVIGLAAMATNLLVGHTGVNSFGHAAYFGLGAY 68

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  +       S      +  ++    GM++G   ++ RG Y A+AT+   ++F  I  +
Sbjct: 69  ATGLTLKYLMPSTPTAFVMGVVVGTLGGMLIGALIVRLRGIYFALATIAFGQVFYFIAFR 128

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W  +T G  G+    RL               F    +   +  YYV+L +  L A  + 
Sbjct: 129 WNSVTGGDNGLRGFQRLAIDL----------GFTQLDITSSLAFYYVVLAILALCAYAMA 178

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            + R+   +  + IR+N++    L+  +      A+ +S  F+ +AG+ +A   +  SP 
Sbjct: 179 TILRSPFGHTLQAIRENERRAQFLSIPVNRHIWIAYTISCFFVSIAGSLYALLNNFASPH 238

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
              ++++   + + ++GGM S        AI +   +   G+   +              
Sbjct: 239 DLYWTQSGDFVLMAVIGGMRSFWGPLLGAAIFVLAQDYLSGVTQDW-------------- 284

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSN 347
               + +   LV+L+    +  L     
Sbjct: 285 -MFFIGMIFVLVVLLIPRGIAGLFQRRA 311


>gi|254502684|ref|ZP_05114835.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222438755|gb|EEE45434.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 401

 Score = 96.1 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 55/333 (16%), Positives = 116/333 (34%), Gaps = 28/333 (8%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
                 +  + LI+ +FA G +I+ G  G LS        +G+Y+ V +     +++   
Sbjct: 39  NAGYPDLMQRFLIFGIFAIGFNILFGLTGYLSFGHAAFLGVGSYAGVWMMKLLTMNVVPA 98

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK-WKPITNGKAG----- 149
           I +S + +G   +++G  SL+  G Y +I TL  +++  ++      PITNG+ G     
Sbjct: 99  IIISVIFAGLFSVVVGYISLRRSGIYFSILTLAFAQMSFSLAYSVLTPITNGETGLQLAL 158

Query: 150 ---------IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
                                 +     F      ++      YY+   +  ++  I + 
Sbjct: 159 DDPRILGVSQVDGSIPPANFFGLPMRESFELTMGGWLFTFNVGYYLCAVVMMIAFYIAIR 218

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           + R+      R ++ NQ+             L+AF +S  + G+AG    A       + 
Sbjct: 219 IFRSPFGMMLRAVKSNQQRMNFTGLNSKPYTLAAFVISGMYAGLAGGLMVAMDPLAGAER 278

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
            +++ +  V+ + ILGG  +L         +     +   +N                  
Sbjct: 279 MQWTASGEVVLMTILGGAGTLIGPVLGAGFIKYFENIFSKINDNILYGWFSGLPEGIADF 338

Query: 321 TTL-------------MVIALFLVILMRSHSLL 340
                           + I   L+++     ++
Sbjct: 339 LVFVIHPFIGKGWHLTLGIMFMLIVIFLPGGIM 371


>gi|121608953|ref|YP_996760.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121553593|gb|ABM57742.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 315

 Score = 96.1 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 59/312 (18%), Positives = 126/312 (40%), Gaps = 31/312 (9%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +     Q+Y   +  ++LI+ + A  L++++G  G++SL     +  GAY+  IL     
Sbjct: 27  VAQAFGQEYYIGVVSRMLIFALAASSLNLILGFGGMVSLGHAAYFGAGAYTVGILMQNGV 86

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           LS WL  P++ ++      ++GL SL+ +G Y  + TL  +++   I+I  +        
Sbjct: 87  LSGWLSWPLAMLVGALLACLVGLISLRTKGVYFIMITLAFAQMIYYIVIGLEVKGG---- 142

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                            +         +  +   +YV+L +  +   +I  L  +     
Sbjct: 143 ------------DESIRLPQRSSIGLNLSSDTTFHYVVLVLVSIFLLLIHRLINSRFGRV 190

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            + IR+N+    ++   ++  KL  F ++ A    AGA  A     +SP +  ++++  +
Sbjct: 191 LQAIRENETRMEAIGYPVLRYKLVCFVIAGALASFAGALLANQNQFVSPGLLHWTQSGSL 250

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           + +VILGG    S        ++ + E+      ++                 ++   L 
Sbjct: 251 LVMVILGGAGYFSGGIIGAIAVLMLEEILSAYTIHW---------------QLILGAILL 295

Query: 330 LVILMRSHSLLR 341
            V+L+  + L  
Sbjct: 296 GVVLLLPNGLAS 307


>gi|315612830|ref|ZP_07887741.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           ATCC 49296]
 gi|315314940|gb|EFU62981.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           ATCC 49296]
          Length = 318

 Score = 96.1 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 80/340 (23%), Positives = 143/340 (42%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + +   L +    L+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNTLWLFLLLAGYGLISVLVSAGVLNLFHVQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  S    + +  + + A+ISGA  +++G+P+L+ +GDYLA+ATL
Sbjct: 66  HAGFMAIGAYAAAIIGSKSPTYGAFFGAMLLGALISGAVALLVGIPTLRLKGDYLAVATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI +  +I    +TNG AGI                                    +
Sbjct: 126 GVSEIIRIFIINGGSLTNGAAGILGIPNFTNWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++    L   R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+
Sbjct: 161 YLFVVVTTIATLNFLRSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F  +I V+ IV+ GG+ S++    +  +L  +  L   +      
Sbjct: 221 LQAGFIGSVVPKDYTFINSINVLIIVVFGGLGSITGTIVSAIVLGILNMLLQDV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  +AL LV++ R   LL     S 
Sbjct: 275 ---------ASVRMIIYALALVLVMIFRPGGLLGTWELSL 305


>gi|221370038|ref|YP_002521134.1| Inner-membrane translocator precursor [Rhodobacter sphaeroides
           KD131]
 gi|221163090|gb|ACM04061.1| Inner-membrane translocator precursor [Rhodobacter sphaeroides
           KD131]
          Length = 331

 Score = 96.1 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 67/330 (20%), Positives = 128/330 (38%), Gaps = 29/330 (8%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L +      L L     A +   Y+  +     I+   A    +++G  G LSL     
Sbjct: 6   LLRVTVAAVALFLVAATLALRLDDYLLYVVTLGAIFATLAVSFDVLLGYTGYLSLAHGAL 65

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           + +GAY+  IL + +G   W  +P + +++GA G ++ L + + RG Y A+ TL +  I 
Sbjct: 66  FGVGAYACGILTAHHGWPFWAALPAAGLVAGAAGAVIALLAFRTRGLYFAVLTLGIGLIG 125

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             + +    +T G  G                   +    +  ++   F+   L      
Sbjct: 126 HQLFLVLAGLTGGVGGFVGIPSPGRPDWVPLDQNGWNALLALALLLATFLAAQLFV---- 181

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
                    R+ +  A   +R++     +L   +  A+L+AF  S+ F G AGA FAA  
Sbjct: 182 ---------RSRLGAACLAVREDLTLAQALGIRVGQARLAAFVFSAIFTGFAGALFAAIS 232

Query: 254 DRISPDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           + ++P+ F        ++++V++GGM +L       A+L  + E     + Y        
Sbjct: 233 NFVAPESFTVLGAGFQLVALVVVGGMGTLWGPILGAALLTALPEALRVASGY-------- 284

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                        + L + ++     L  L
Sbjct: 285 -------SLMAYGVLLLVFVIFAPRGLASL 307


>gi|239817968|ref|YP_002946878.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239804545|gb|ACS21612.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 354

 Score = 96.1 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 71/343 (20%), Positives = 136/343 (39%), Gaps = 23/343 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +  ++      +  +V  L  F+ +    S  ++ ++    LI  + A GL+I+VG
Sbjct: 18  QIFPIAQDR------IAMLVLLLAAFVAVPLGVSDYWMRAILTPFLILSLAALGLNILVG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGD 120
             G +SL      A+GAY+      R      +  + +  + +   G++ G+PSL+ +G 
Sbjct: 72  YCGQISLGTGAFMAVGAYAAYNFQVRIDGMPLIASLLLGGLCATVIGVLFGIPSLRIKGL 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL          ++ +                   ++    +         +   
Sbjct: 132 YLAVATLAAQFFTDWAFLRIQWF-------------TNNSSSGSVSVAGLNVFGVPIESP 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y   L    + A +   L R+AI   W  +RD   A   +    ++AKL+AFAVSS 
Sbjct: 179 VQKYLFCLVFVVVFALLAKNLVRSAIGREWMAMRDMDVAAAVIGIRPVYAKLTAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            +G+AGA +         P  F    +  ++ +VI+GG+ S+       A ++ +     
Sbjct: 239 IVGVAGALWGFIHLGAWEPAAFSIDRSFQLLFMVIIGGLGSIMGSFFGAAFIVLLPLFLN 298

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +    +          +   T +    +   +++  H L RL
Sbjct: 299 QL--PGWLGFSISTALASHLETMIFGALIVFFLIVEPHGLARL 339


>gi|296134674|ref|YP_003641916.1| inner-membrane translocator [Thiomonas intermedia K12]
 gi|295794796|gb|ADG29586.1| inner-membrane translocator [Thiomonas intermedia K12]
          Length = 331

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 59/321 (18%), Positives = 132/321 (41%), Gaps = 26/321 (8%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L+L             + +  ++LIY + A GL++++G  G LS      + +G+Y 
Sbjct: 28  ILALVLLTAPAWLHYVGGYNDIASRVLIYGLAAMGLNLLLGHTGGLSFGHAAYFGLGSYG 87

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             ++      ++ L +    ++ G    ++   +++ RG Y A+ T+ + ++F  I I+W
Sbjct: 88  VGLMLKYMTHNVLLALLGGTLLGGVVAAVLAPIAVRRRGIYFAMITIAIGQMFYFIAIRW 147

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T G  G            T  S      F   + +  +  YY+++    L A ++  
Sbjct: 148 QAVTGGYDG-----------LTGFSRHTLHLFGFDWTMGSLGFYYLVVACFALGALVLWI 196

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +  + + + +  IR+NQK    L   +      +FA+S   + +AG   A   +  SP+ 
Sbjct: 197 VLNSPLGHTFVAIRENQKRLTFLGLPVQRYAAISFALSGLIVALAGGLNALLDNFTSPNT 256

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
             ++ +  ++ I +LGGM +        AI + V +    +   +               
Sbjct: 257 LNYTFSGDLVVIAVLGGMRNFWGPLVGAAIFVLVRDYASSVTDNW--------------- 301

Query: 321 TTLMVIALFLVILMRSHSLLR 341
            +++ +   L +L     ++ 
Sbjct: 302 MSVIGLIFVLSVLFFPLGVMG 322


>gi|261338471|ref|ZP_05966355.1| putative branched-chain amino acid transport system, permease
           component [Bifidobacterium gallicum DSM 20093]
 gi|270276462|gb|EFA22316.1| putative branched-chain amino acid transport system, permease
           component [Bifidobacterium gallicum DSM 20093]
          Length = 327

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 60/310 (19%), Positives = 124/310 (40%), Gaps = 8/310 (2%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
               Y + A GL+I  G  GL+++       +GAY + I     G ++++ I  + +++ 
Sbjct: 18  TTAAYALAAMGLNIHFGMTGLMNMGQAGFMLLGAYGFAI-TQAMGGNLFISIVTALVLAA 76

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIYVADRLYFL--- 159
             G+++G+P+LK   DYLA+ TL  +EI + +        +T G AGI   D        
Sbjct: 77  IYGLLLGIPTLKLGPDYLAMVTLAAAEIVRIVARSTAMTHVTGGSAGISPQDFTTQFEAL 136

Query: 160 -GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S        ++ +    ++  V   +  ++A +      +      + IR+++ 
Sbjct: 137 SPLPDGSTTFLLWTYNNNIANSWWLRIVAWILVAIAAVLCWRWFNSPWGRVLKGIREDEN 196

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL   +   K+ A  +   F  +AG  F      + PD    +      +I++LGG 
Sbjct: 197 AIKSLGKNVTKYKMQALILGGLFGAIAGIVFVLP-RSVQPDSLGRTVTFYTWTILLLGGA 255

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++      + +L  ++ L   +        +            ++ +AL  +++ R   
Sbjct: 256 ATIMGPILGSCVLWVLLTLVKEVMRVSIPETVMSSNQIEALGWVIVGVALMCLVIFRPQG 315

Query: 339 LLRLRTPSNF 348
           +L  +    F
Sbjct: 316 ILGNKKELAF 325


>gi|260425454|ref|ZP_05779434.1| inner-membrane translocator [Citreicella sp. SE45]
 gi|260423394|gb|EEX16644.1| inner-membrane translocator [Citreicella sp. SE45]
          Length = 326

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 57/302 (18%), Positives = 107/302 (35%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
                     +  ++  + +I+ + A GL+I +G  GL+SL   + + IG Y+  IL S 
Sbjct: 19  PGWALWADAPFTITLATRAVIFALAAVGLNIALGMGGLVSLGHAVFFGIGGYAMGILASH 78

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                 L+     +       ++ L ++   G    +  L+         I         
Sbjct: 79  AQNYTPLMEWPFEIAGTKSMPVIWLVAVLASGLAALLIGLLSLRTSGVYFIMITLAFGQM 138

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
              +      + G    S+     F     +  I  Y +  G+  L   +   L R+   
Sbjct: 139 MYFFAISWPTYGGEDGLSIYVRNGFSGLNTLDPIQFYGLCFGLLCLVLVLHARLMRSPFG 198

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
            A    R   +   ++    +  +L A  +S A  G+AGA FA     +SP M  +  + 
Sbjct: 199 LALNAARQVPERVRAVGLDPVRLQLVALVISGAITGLAGALFADLNRFVSPTMLSWQMSG 258

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            ++  VI+GG+  L          + +  L  G++ Y+   L  F     +     +V  
Sbjct: 259 EIMVFVIIGGVARLLGPVAGAGFYVLLEHLLGGVSEYWQIFLGLFLLLVVLFGKGGLVGV 318

Query: 328 LF 329
           L 
Sbjct: 319 LA 320


>gi|300703664|ref|YP_003745266.1| high-affinity branched-chain amino acid transporter permease (livh
           or livm) [Ralstonia solanacearum CFBP2957]
 gi|299071327|emb|CBJ42645.1| putative high-affinity branched-chain amino acid transport system
           permease (livH or livM) [Ralstonia solanacearum
           CFBP2957]
          Length = 547

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 77/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ + +              +     +        
Sbjct: 273 ITYGLIGVINMAHGEFLMIGAYATYVVQTIFRNHFPGAFDWYLPAALPAAFLAAAIVGFA 332

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                ++   +     + +L  +         +        +     S +         +
Sbjct: 333 LER--SVLRHLYGRPLETLLATFGVSLLLMQAVRSLFGAQNVEVANPSWMSGGIALYPGL 390

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     + A     L RT +    R    N+     +          AFA 
Sbjct: 391 ILPTNRLVILAFALVVVAMAWAVLNRTRLGLFVRATTQNRTMAACVGVRTWKVDSYAFAF 450

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  L+        L  + + 
Sbjct: 451 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTIIGAFGLGLINKF 508

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     ++  + L I  R   L  L+  S  
Sbjct: 509 IEPFYGAVLAK-------------IFVLALIVLFIQKRPQGLFALKGRSAE 546


>gi|299134715|ref|ZP_07027907.1| inner-membrane translocator [Afipia sp. 1NLS2]
 gi|298590525|gb|EFI50728.1| inner-membrane translocator [Afipia sp. 1NLS2]
          Length = 318

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 61/326 (18%), Positives = 123/326 (37%), Gaps = 24/326 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  +   L+L               +G +++I  + A  L+ ++G  G+LS      + 
Sbjct: 9   LLANIGVWLVLATMPYWLPLIGGYTELGTRVVILGLAAMSLNFLLGYTGVLSFGHAAYFG 68

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY   ++      S  L I     +      I+G   ++ RG Y A+ T+   ++F  
Sbjct: 69  LGAYGAGLMLRYLYPSTGLAIIFGVALGTFAAAIIGPMIIRLRGVYFAMVTIAFGQVFYF 128

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I  +W  +T G  G+    RL                           YY +L +  ++ 
Sbjct: 129 IAFRWHSVTGGDDGLTGWSRLPIDLGFTT---------LDIQGNSRLFYYFVLAIFAIAV 179

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I+ W+ R+   +    IR+N++    L   I      ++ +S AF+ +AGA +A   + 
Sbjct: 180 GIMAWVLRSPFGHTLIAIRENERRARFLGIPIDRHIWMSWTISCAFVSLAGALYALLNNF 239

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           + P    ++++   + + +LGGM S        AI + + +        +          
Sbjct: 240 VDPRALYWTQSGDFVIMAVLGGMRSFWGPMIGAAIFVVLQDYLSSQTENW---------- 289

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                 + + +   L++L     +L 
Sbjct: 290 -----MSFVGLFFVLIVLFFPRGVLG 310


>gi|332558745|ref|ZP_08413067.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides WS8N]
 gi|332276457|gb|EGJ21772.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides WS8N]
          Length = 642

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 97/303 (32%), Gaps = 26/303 (8%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLIPVSAMISG 104
           IY + A GL+I  G + ++++       +GAY+  +     + Y +SI + +P++  ++ 
Sbjct: 361 IYFLAAIGLAITFGVMRVINMAHGEFIMMGAYTGYVVQQWIADYTISILVALPLAFAVTF 420

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
           A G+ M    +        + TL+ +      L +      G     +            
Sbjct: 421 AAGVAMERLVI-RHLYRRPLETLLATFGISIALQQLAKNIFGTQARPLTAPA-------- 471

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
             +      +  V        + +         +  + RT +    R +  N     S+ 
Sbjct: 472 -WLDGALSFNDVVSISYIRIAIFVLAMIFLGVFLFIMTRTRLGLEVRAVTQNPSMAASMG 530

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                  +  F + S   G+AG          S     +         V++GG+ ++   
Sbjct: 531 INPDRINMLTFGLGSGIAGIAGVAIGLFAKVTSELGQDYIVQS--FMTVVVGGVGNIWGT 588

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
               A++ GV +    +N     +   +   F +                R   ++ L+ 
Sbjct: 589 LAGAAMIGGVQKGIEWLNPSNTLAAQTYMILFIIIFIQF-----------RPRGIVALKG 637

Query: 345 PSN 347
            + 
Sbjct: 638 RAA 640


>gi|239813652|ref|YP_002942562.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239800229|gb|ACS17296.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 324

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 66/327 (20%), Positives = 127/327 (38%), Gaps = 29/327 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+  L       A   Q Y      +ILI V+    L+++VG  G+++L       +GA
Sbjct: 20  IVLAVLASLPLWAAATDQYYYLDFARRILIVVLATASLNLLVGYCGMVALGHAGFVGVGA 79

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+          S W L  +S + +G    +MG  +L+ RG Y  + TL  +++   + +
Sbjct: 80  YTVAAFVEAGVQSAWTLWALSGVCAGLVACLMGTVALRTRGVYFIMITLAFAQLLYYLAV 139

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               I  G  G  +  R                 P   +      ++++L       + +
Sbjct: 140 SM-RIYGGDDGYNLPFRPQVG-------------PGLSLDDSATFFWLVLAFAAACFAGL 185

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
            +L  +    A   IRDN+    +L   +   +L+AF ++ A  G++G+        ISP
Sbjct: 186 QYLLGSRFGKALCGIRDNEARMTALGYPVFRLRLAAFTLAGAIAGLSGSLLIMHNGFISP 245

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
               +S++ I++ +++LGG+      A  T + + + E+      Y+             
Sbjct: 246 SSIHWSQSSILLVMLVLGGVARPWGAAIGTTVWMVLEEVLRQSTEYWHWP---------- 295

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345
                +   L L++L     L +L   
Sbjct: 296 -----LGALLILIVLAAPQGLAQLHRR 317


>gi|159045236|ref|YP_001534030.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12]
 gi|157912996|gb|ABV94429.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12]
          Length = 554

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 90/297 (30%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       IGAY+   +      S   L   S +I+      + 
Sbjct: 275 AAIGLAITFGVMGVINMAHGELVMIGAYTTFFVQEIIRTSFPHLFDWSLLIAAPLAFAVA 334

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                           +     + +L  W      +  +              S      
Sbjct: 335 GAVGVAIER--GCVRFLYGRPLETLLATWGISLILQQTVRSIFGPNNREVGNPSW-MSGA 391

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++LL    + A ++  L++TAI    R +  N+    ++     +  
Sbjct: 392 FEVGQMTITYNRLWILLFALAVFAVLLFVLKKTAIGLQMRAVTQNRAMAANMGIRTGWVD 451

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + +   G+AG   A S+          S  +    +V+ GG  ++     A   L
Sbjct: 452 AMTFGLGAGIAGLAGV--ALSQIDNVSPNLGQSYIVDSFMVVVFGGAGNIWGTLAAAFSL 509

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +                          L+++ + L I  R   L  ++  +  
Sbjct: 510 GIANKFLEPYAGAVLAK-------------ILVLVFIILFIQKRPRGLFAVKGRAVE 553


>gi|84496248|ref|ZP_00995102.1| putative branched-chain amino acid transport permease [Janibacter
           sp. HTCC2649]
 gi|84383016|gb|EAP98897.1| putative branched-chain amino acid transport permease [Janibacter
           sp. HTCC2649]
          Length = 345

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 62/334 (18%), Positives = 127/334 (38%), Gaps = 31/334 (9%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            K +  +    +V  LL+ L L           + + I+ + +FA  + +++G  GLLS 
Sbjct: 21  RKLNPFVRAGMLVVALLVILALPWYIYPP----VAMDIMAWGLFAISVDLLLGFTGLLSF 76

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
              + +   AY   ++ +R GL   + I   A+++    +  G  +++  G Y A+ TL 
Sbjct: 77  GHAMFWGTSAYVTGLIATRSGLPFPVAILGGAVVAMLIAVPTGYLAVRRTGIYFAMVTLA 136

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
            +++   I  + + +T G+ G+    + +F    V +                + YY  L
Sbjct: 137 FAQMIFFIANQARDLTGGENGLQGIPKTFFGIELVETD-------------PFYFYYAAL 183

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  L A +      +        IRDN     +L   +   K+  F +S+   G+AG  
Sbjct: 184 PLILLGAFVAWRTVSSPFGRVLLAIRDNPARARALGYDVERYKIMVFVISAGIAGLAGGV 243

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           F+ S    S     +  +  V+ I +LGG+ +L       A+++ + +      F     
Sbjct: 244 FSVSHGFASLQELIWQTSGKVVLITVLGGIGTLWGGPLGAAVVVLLEDSLASSGFNGIG- 302

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         +      L++L+    +   
Sbjct: 303 -------------IITGTIFVLIVLLFRKGIWGT 323


>gi|317402272|gb|EFV82854.1| ABC transporter like protein [Achromobacter xylosoxidans C54]
          Length = 453

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 98/304 (32%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             ++   I +Y M A GL ++ G  GL S        +GAY+  +L +R      L   +
Sbjct: 25  YVTLLNYIGLYAMVALGLVLLTGVGGLTSFGQAAFVGVGAYTTALLTTRADA---LPAWL 81

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +     ++    L     YL  A  +         +    I  G +  +    +  
Sbjct: 82  AWLGASPWLTLLAGLLLTLVVAYLLGAITLK---LSGHFLPLGTIAWGLSLYFAFGSVEG 138

Query: 159 LGTTVRSLIRFFRFPSSFVIYEI-FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
           LG               + + +   +YY++     ++      L  +    A R ++  +
Sbjct: 139 LGGHTGIPDVPAINLFGWSLTQGDEIYYLIWAFLLVAMWSTSNLLDSREGRAIRALKGGR 198

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               S+      +++  F +++     +G  +A  +  ++P+ F     I  + + ++GG
Sbjct: 199 VMAESMGVDTARSRMVIFIIAALQACASGWLYAHMQRFVNPNPFGLQMGIEYLFMTVIGG 258

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
              +        +   + +               F          +    + L++     
Sbjct: 259 AGQVWGALVGAGVFTVLKQWLQDWLPKLLGQTGNF-------EVIVFGFGMVLLLHRFRG 311

Query: 338 SLLR 341
            L  
Sbjct: 312 GLWP 315


>gi|239628600|ref|ZP_04671631.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518746|gb|EEQ58612.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 321

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 60/290 (20%), Positives = 112/290 (38%), Gaps = 14/290 (4%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           L       Y   +  Q ++Y++   GL+  +G  G    +    + +G+Y   +L  + G
Sbjct: 23  LPFLSRNNYNQILMNQTIVYIIAVLGLNFTMGLSGQFDFSPAAIFGLGSYMTGLLSVKLG 82

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +S WL    + +     G+++G PSL+ +G Y  +ATL   E  + +L     +T G  G
Sbjct: 83  ISPWLGTIAAVLFGLVIGVMIGYPSLRLKGVYFVLATLGFLEATRLLLTNMTWLTEGTNG 142

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +        +G    +   F              YY+ L    ++  I   +  +     
Sbjct: 143 VAGIPSYQLIGINFGNPRNF--------------YYLALFFMIIAMVISKRVIDSKWGRM 188

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              I+DN  A           K+ A+ + S F+  AGA  A     I P  F F   +  
Sbjct: 189 LIAIKDNDVAVEGCGIDKASIKIKAYILGSCFMTFAGAMNAHMFQFIHPSDFNFDFTVKF 248

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           I +++LGG+ ++        ++  + E+   +  YY+ +         M 
Sbjct: 249 IMMLMLGGLGTIPGCVMGGIVVTILPEMLKFLGEYYWLAFSTLMLIMVMF 298


>gi|220905378|ref|YP_002480690.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869677|gb|ACL50012.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 387

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 63/343 (18%), Positives = 118/343 (34%), Gaps = 8/343 (2%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           LL +V  +LL      +    Y  S+   + I ++FA  L++V G +G  S        +
Sbjct: 34  LLFMVVGVLLICAEQFSWIDGYWLSVLKFMGINIVFAASLNLVNGYMGEFSCGHAGFMCV 93

Query: 77  GAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           GAY   ++         +     +   ++     ++ L +      +  +  L   +   
Sbjct: 94  GAYVGGLISIILFTSNKLVGAPLLPPELAPLLFPLVILVAGGVAAIFGLLVALPSFKTRD 153

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           + L       N      + +     G    S +R        V    +M   ++ +   S
Sbjct: 154 DYLAIITIAANYIIIALIINIDVVGGPRGLSGMRGVVRAMEGVADLPWMMVWVVLLVMAS 213

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             ++  L  + +      +  N+ A   ++      KL AF VS+   GMAGA +A    
Sbjct: 214 IMMLYRLVNSTLGKGIPAVCQNEVAAEIMSVNTKKVKLVAFMVSAGIAGMAGAVYAHMFS 273

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY------FNS 308
            I  + F   ++   + +V LGGM SLS    A      ++E+                 
Sbjct: 274 SIYANSFGIMKSTEAMVMVYLGGMGSLSGSVLAAIFFTLLIEILRFALPALSDLLHHLPF 333

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +             L+ + L L++  R   LL  R  +    R
Sbjct: 334 VPDSFMISQEWKWVLIPLILILLMQFRPEGLLGNRELTQVFPR 376


>gi|149020392|ref|ZP_01835284.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP23-BS72]
 gi|147930694|gb|EDK81676.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP23-BS72]
          Length = 318

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 77/325 (23%), Positives = 137/325 (42%), Gaps = 42/325 (12%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L+ + +       +   +  QI I ++ A GL+++VG  G  SL      AIGAY+  I+
Sbjct: 21  LISVLVSVGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80

Query: 85  G--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           G  S    + +  + V A++SGA  +++G+P+L+ +GDYLA+ATL +SEI +  +I    
Sbjct: 81  GSKSPTYGAFFGAMLVGALLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +TNG AGI                                    +     ++    L   
Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+  A     + P  + 
Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  +I V+ IV+ GG+ S++    +  +L  +  L   +                     
Sbjct: 236 FINSINVLIIVVFGGLGSITGATVSAIVLGILNMLLQDV---------------TSVRMI 280

Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347
           +  +AL LV++ R   LL     S 
Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305


>gi|85706818|ref|ZP_01037909.1| ABC transporter permease protein [Roseovarius sp. 217]
 gi|85668611|gb|EAQ23481.1| ABC transporter permease protein [Roseovarius sp. 217]
          Length = 327

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 58/328 (17%), Positives = 109/328 (33%), Gaps = 15/328 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    ++  LLLF        + ++ ++  + +I  +   GL+I +G  GL+S    + +
Sbjct: 6   LLNATLMAILLLFPLYAWATDEPFLITLTTRAVILAIAGVGLNIALGFGGLVSFGHALFF 65

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G Y+  IL         L      +       ++ + +             +      
Sbjct: 66  GLGGYAMGILAYHAQTYTTLTDWPLTLQGTKSMPVIWIIATLTSALAALAVGALSLRTTG 125

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              I      +     +      + G    S+     FP    +  I  + +  G+  L 
Sbjct: 126 VYFIMITLAFSQMFYYFAISWPTYGGEDGLSIYVRNGFPGLNTMDPIQFFALCYGLLALI 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L R+         R N+    ++        L AF +S A  G+AGA FA    
Sbjct: 186 LLFTARLSRSNFGLMLGAARQNEARVAAIGQRPYRLYLIAFTLSGAITGLAGALFADLNR 245

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            +SP MF +  +  ++  VILGG+  +       A+ I +     G++ Y+         
Sbjct: 246 FVSPVMFSWQTSGEIMVFVILGGVGRVFGPVAGAALFILLEHSLGGLSEYWH-------- 297

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
                    +   L   +L     L  L
Sbjct: 298 -------IYLGAILLGTVLFARGGLFGL 318


>gi|163760738|ref|ZP_02167818.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Hoeflea phototrophica DFL-43]
 gi|162282060|gb|EDQ32351.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Hoeflea phototrophica DFL-43]
          Length = 359

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 80/343 (23%), Positives = 141/343 (41%), Gaps = 19/343 (5%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           +IF +R ++       + ++    + L +    S  +++++    LI  + A GL+I+ G
Sbjct: 18  AIFPIREDR-------IGMMIIGAIALAIPFVASDFFLNAIMTPFLILALAAIGLNILTG 70

Query: 62  SLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
             G LSL       +GAYS   +      ++I +L+ +S   S   G+I GLPSL+ +G 
Sbjct: 71  YAGQLSLGTGAFMGVGAYSCYKLTTIFPDVNIVILVLLSGFFSAGIGVIFGLPSLRIKGL 130

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ TL      +   I+   + N  +   +          +          +      
Sbjct: 131 YLAVTTLAAQFFLEWCFIRIPWLYNYNSSGAIEVPERRGFGDI--------VLTGPAAGA 182

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y+V+L +  +    +  + R  I   W  IRD   A   +    + AKLSAFAVSS 
Sbjct: 183 MTQYFVVLAIVVVVTFAVKNIVRGRIGRQWMMIRDMDIAAELMGVRPLTAKLSAFAVSSY 242

Query: 241 FIGMAGAFFA-ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
             G+AGA F         P  F  + +  ++ +VILGG+ SL       A + G+  +  
Sbjct: 243 LCGVAGAMFIFFYLGAAEPSAFSITLSFQILFMVILGGLGSLVGSFFGAAFIWGLPIVLR 302

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                    +           T ++   +   +++  H L RL
Sbjct: 303 AGLPAMGIDINAETVFHVA--TMIVGALIIFFLIVEPHGLARL 343


>gi|72161587|ref|YP_289244.1| branched-chain amino acid transport system permease [Thermobifida
           fusca YX]
 gi|71915319|gb|AAZ55221.1| branched-chain amino acid transport system permease protein
           [Thermobifida fusca YX]
          Length = 328

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 65/324 (20%), Positives = 137/324 (42%), Gaps = 6/324 (1%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +    +     ++G    +Y + A GL++  G  GLL+   V    +G Y   +  S +G
Sbjct: 3   ILQVLADATRSAIGPVAAVYALAAIGLNMHFGYTGLLNFGQVGFMLVGGYGVAVSVSTFG 62

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI--KWKPITNGK 147
           L + +   +    + A  +++GLP+L+ R DYLAI T+ ++E+ + I      + IT G 
Sbjct: 63  LPLGVGFLIGIASAVALALVLGLPTLRLRADYLAITTIAVAEVARLIYRAEFLRDITGGV 122

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
            G+      ++      S    F +  SF   ++++  V  G+  + ++++  L  +   
Sbjct: 123 YGLQSFSTAFYQWNPFPSGTYGFGW-LSFSARDLWVMTVTWGLVLVGSAVMWLLIHSPWG 181

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
              + IR+++ A  SL   +   K+ +  +   F  +AGA    ++  I+PD F      
Sbjct: 182 RVIKGIREDEDAVRSLGKNVFVYKMQSLIIGGVFGALAGAMLVVNQQTITPDQFMPQVTF 241

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS---LLKFDCSFNMRHTTLM 324
            + +I++LGG          + ++  ++ +   +      +                 L+
Sbjct: 242 YLWAILLLGGAGRTLGPVLGSVVMWFLLSVTDSVLRQLIAADVITFIASSEIGGVRHALV 301

Query: 325 VIALFLVILMRSHSLLRLRTPSNF 348
            +AL ++I+ R   L+  R     
Sbjct: 302 GVALLVLIIFRPQGLIGNRKEMLI 325


>gi|120612460|ref|YP_972138.1| inner-membrane translocator [Acidovorax citrulli AAC00-1]
 gi|120590924|gb|ABM34364.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 362

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 61/333 (18%), Positives = 110/333 (33%), Gaps = 26/333 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              LA+       L L    +  Y        L+  +FA    ++ G   +L+L   + +
Sbjct: 23  WLALALCVLAFAGLALVPWVASPYASVALRDALVLAIFALSYDLLWGKAMMLTLGHAVFF 82

Query: 75  AIGAYSYVILGSRYGLSIW--LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            +GAY   I  ++   S    +L+ V +  + A  +   L     R  + AI T+ +  I
Sbjct: 83  GVGAYGVAIATTQLQWSWIEGMLLGVGSSAALAALLGCFLLYAGVRLHFFAIITMAVLVI 142

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            + +   W+ +T G  GI     L       +            +  +   Y  +L    
Sbjct: 143 ARQVATSWQSVTGGDVGILGVPGLRLDVAGWQ----------LDLSSDRASYLAVLCALA 192

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           LS   +  L RT        I  N+              +    +S+A  G AG  +AAS
Sbjct: 193 LSLLFVWGLVRTRYGLVLAAIGMNEFRAKHCGFDTSRHLVVVSTLSAALAGFAGCLYAAS 252

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              ++PD+F    +  VI  V +GG  SL     A      + +     +   +      
Sbjct: 253 AGVVAPDLFSVLLSTEVILWVAVGGRGSLLGAVVAAVFFTRLQQEVSTYSTELWP----- 307

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                     ++     + +L     +  L   
Sbjct: 308 ---------LILGALFLVCVLFMPRGIPGLLRR 331


>gi|56697377|ref|YP_167745.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56679114|gb|AAV95780.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 340

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 72/325 (22%), Positives = 137/325 (42%), Gaps = 17/325 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           LL  V  +  F  L    +Q+Y+    I   ++ M A   ++++G  G+ SL  ++ +A 
Sbjct: 11  LLVSVLIVAGFAALPLVMTQRYLLGEVILFFLWAMVAMNWNLLMGHAGVFSLAQMLFFAT 70

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAYS  +  S  G+SIW  +P++A++S      +GL  L+  G Y+A+ T  +  +   +
Sbjct: 71  GAYSVAMGTSYLGVSIWAALPLAAVVSAILAFFIGLACLRLTGAYVALLTYAIVGMVHVL 130

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           +I                +++           F         + +  YYV L    ++  
Sbjct: 131 IITETECF--TMVRNSCQQMFGGAAGFSQFEDFGFRKLLRGNWILGNYYVALLAFAVTIL 188

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            I+ +    +  A+R IRDN     S        +++AFA+S+   G+AGA +A      
Sbjct: 189 GIVVIIHGRLGLAFRAIRDNVGYASSRGIDRRKYQIAAFAISAFLTGLAGAIYAGHFRAA 248

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
            P +F FS  + V+S+V++GG+ S          ++ ++E               F    
Sbjct: 249 GPSLFDFSTLLFVLSMVVVGGVGSTWGPIIGAGTMMLIIE---------------FSKGM 293

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 ++ +AL + +++    L  
Sbjct: 294 GDARDLILGVALIVFVVVMPKGLAG 318


>gi|171060358|ref|YP_001792707.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
 gi|170777803|gb|ACB35942.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
          Length = 330

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 68/310 (21%), Positives = 126/310 (40%), Gaps = 30/310 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
               + Y   +    +++++   GL++ +G  G  SL     + IGAY+  IL       
Sbjct: 20  PPMLKSYGVYLFTYWVVFIIATMGLNLTIGYAGQKSLGHAAFFGIGAYTVAILMQAGIS- 78

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            W+ +PV+ +     G+I+G P+L+ +  YLA ATL  +     ++   + +T G  GI 
Sbjct: 79  FWIGLPVAMLGCFVIGLIVGFPALRVQTIYLAFATLGFNTAVWLVMRNEEWLTGGTFGIN 138

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              R    G ++                 +  YY +L +  +  +++  L R+    A+ 
Sbjct: 139 NIARPSLFGISLDGN--------------LAYYYFVLAVAVILGALLFGLLRSPWGKAFT 184

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +RDN     SL   +    L AFA+ + + G+AGA FA+    I P  F    +I++  
Sbjct: 185 ALRDNPIRAESLGINVQNYTLLAFAIGAVYAGVAGALFASLVQFIDPAPFTVGASIMMYL 244

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +V+LGG+          A+ + + E    +                  +       + L+
Sbjct: 245 MVVLGGLGYFFGPVLGAAVGVLLPEWMRDLKD---------------WYLFAFGSVVILL 289

Query: 332 ILMRSHSLLR 341
           +L     LL 
Sbjct: 290 MLWLPDGLLS 299


>gi|121604558|ref|YP_981887.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120593527|gb|ABM36966.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 336

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 73/317 (23%), Positives = 133/317 (41%), Gaps = 27/317 (8%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
            L + +     + Y   +    LI+++   GL++ +G  G  SL     + IGAY+  I+
Sbjct: 18  ALLVLVAPQYLKNYGIYLLTYWLIFIIATMGLNLTIGYAGQKSLGHAAFFGIGAYTVAIM 77

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                   WL +P +A++  A G+I+G P+L+ +  YLA ATL  +     ++   + +T
Sbjct: 78  MKAGIS-FWLGLPAAALLCFAIGLILGFPALRVQTIYLAFATLGFNTAVWLVMRNEEWLT 136

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G  GI    R    G ++ +                  YY +L +  + A ++  L R+
Sbjct: 137 GGTFGINNIARPVIFGYSLEANR--------------PYYYFVLAVTLVLAGLLWGLLRS 182

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
               A++ +RDN     SL   I    L +FA+ + + G+AGA FA+    I P  F   
Sbjct: 183 PWGKAFKALRDNPIRAESLGVDIRNYTLLSFAIGAVYAGVAGALFASLVQFIEPAPFAVG 242

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
            +I++  +V++GG           A+ + + E    +                  +  L 
Sbjct: 243 ASIMMYLMVVVGGAGYFLGPVIGAAVGVVLPEWLRDV------------PGVANWYLPLF 290

Query: 325 VIALFLVILMRSHSLLR 341
             A+ L+++     LL 
Sbjct: 291 GAAVVLLMIWLPDGLLS 307


>gi|329904761|ref|ZP_08273928.1| permease component of ABC transporter protein [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327547839|gb|EGF32601.1| permease component of ABC transporter protein [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 326

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 59/302 (19%), Positives = 119/302 (39%), Gaps = 25/302 (8%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           S+ I IL++ +FA G ++  G  G LS      +  GAY   IL ++Y +   L I    
Sbjct: 43  SLAINILLFGLFAAGYNLTFGYTGKLSFGHAAFFGSGAYGCGILIAKYSIGWPLAILFGI 102

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
            ++G   + MGL +++ RG Y A+ TL +++    +      IT G  G+   +      
Sbjct: 103 ALAGLIALAMGLLAMRTRGIYFAMVTLALAQCVYFLFFHATSITGGDNGLRGVNINTVDL 162

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                           ++  +  YY +L    ++  +I  +  +   +    +R+N+   
Sbjct: 163 ----------GVVQLDLLNPLVKYYFMLSFVSVAIWLIARILNSPFGSVLEALRENENRA 212

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +    +  A+L +  VS    G+AGA  A +   +S D   +  +  V+ + +LGGM +
Sbjct: 213 RACGINVERARLLSLVVSGMICGLAGALNAINLSTVSVDSLSYHTSGQVMMLTLLGGMGT 272

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                    I I +  +  G+   +                 ++ +   +++L     + 
Sbjct: 273 FFGPFLGAGIFIAIEHIVTGITERW---------------QLIVGVIFIILVLFFPKGIW 317

Query: 341 RL 342
             
Sbjct: 318 GT 319


>gi|194397412|ref|YP_002037397.1| branched-chain amino acid ABC transporter permease [Streptococcus
           pneumoniae G54]
 gi|194357079|gb|ACF55527.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae G54]
          Length = 318

 Score = 96.1 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 75/325 (23%), Positives = 135/325 (41%), Gaps = 42/325 (12%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L+ + +       +   +  QI I ++ A GL+++VG  G  SL      AIGAY+  I+
Sbjct: 21  LISVLVSVGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80

Query: 85  --GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
              S    + +  + V A++SG   +++G+P+L+ +GDYLA+ATL +SEI +  +I    
Sbjct: 81  GSTSPTYGAFFGAMLVGALLSGVVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +TNG AGI                                    +     ++    L   
Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+  A     + P  + 
Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  +I V+ IV+ GG+ S++    +  +L  +  L   +                     
Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVSAIVLGILNMLLQDV---------------ASVRMI 280

Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347
           +  +AL LV++ R   LL     S 
Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305


>gi|319761265|ref|YP_004125202.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|330823132|ref|YP_004386435.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317115826|gb|ADU98314.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|329308504|gb|AEB82919.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 354

 Score = 96.1 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 76/328 (23%), Positives = 137/328 (41%), Gaps = 17/328 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +   +   + F+ +    S  +  ++ I +LI  + A GL+I+VG  G +SL      A+
Sbjct: 27  IAIGLILAVAFVVVPMVASDYFFQAILIPLLIMSLGALGLNILVGYCGQISLGTAAFMAV 86

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACG-MIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GAY+   L +R+     LL  +   +      ++ GLPSL+ RG YLA+ATL        
Sbjct: 87  GAYAAYNLQARFDGMPLLLALIGGGLIAMVFGVVFGLPSLRIRGLYLAVATLAAQFFVDW 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I  +   +TN  +   V+ +   +                        Y + LG+  +  
Sbjct: 147 ITTRADWVTNNSSSGSVSAKALAIAGWQIDTPMEK-------------YLLCLGILCVLG 193

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRD 254
                L R+++   W  +RD   A   +    ++AKLSAFAVSS  +G+AGA +      
Sbjct: 194 LAAKNLVRSSVGREWMAMRDMDVAAAVIGIRPVYAKLSAFAVSSFIVGIAGALWGFVHLG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
              P  F    ++ ++ +VI+GG+ S+       A  I +  L   +   ++  L     
Sbjct: 254 AWEPAAFSLDRSLQLLFMVIIGGLGSIMGSIFGAAFFILLPLLLNQV--PHWLGLPISTA 311

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +       +    +   +++  H L +L
Sbjct: 312 TATYLEHMIFGALIVFFLIVEPHGLAKL 339


>gi|218782589|ref|YP_002433907.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218763973|gb|ACL06439.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 373

 Score = 96.1 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 60/345 (17%), Positives = 125/345 (36%), Gaps = 13/345 (3%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            K    +  +     L+LF+             + ++I+I+        I++G  G+LS 
Sbjct: 21  RKRYYSIGFVLPCLVLVLFVLTPFLSPSYKTLDLALKIIIFASLVASFDIMLGYTGILSF 80

Query: 69  NCVIAYAIGAYSYVI----LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
              + + IGAY         G      ++L + ++  ++    +I+ L SL+ +  + A+
Sbjct: 81  GHGMFFGIGAYCVAFLNGKYGDPTYFHLFLGLLLAVAVACLLALIVSLISLRVKAIFFAM 140

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL ++E+   +  K    T G+ GI ++    F             F    V   +  Y
Sbjct: 141 ITLALAELTIVLANKLSHFTGGEDGISISLPGIFSAAYNPG-----SFLGLDVSGRVITY 195

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y +L  C    +++L    + +    + IRDN     +L     + +  +  +      M
Sbjct: 196 YFILLACLGLFALMLRFTHSPLGRVLQAIRDNTDRAEALGYKTFYFQTLSILLGCTVAAM 255

Query: 245 AGAFFAASRDRISPDMF--KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
            G  +A     ++P+      +  + V+ +VI+GGM +L       A L+        + 
Sbjct: 256 TGGLYAMWVGYVNPESTLEVMAIMLNVLLMVIIGGMGTLYGGIVGAAFLLITQTFLPDLQ 315

Query: 303 FYYFNSLLKFDCSFNMR--HTTLMVIALFLVILMRSHSLLRLRTP 345
               +          +      L  I   LV++     ++     
Sbjct: 316 KIAIDLFPNASLLHTILERWLLLFGILFILVVIFFPKGVVGSARE 360


>gi|11497841|ref|NP_069063.1| branched-chain amino acid ABC transporter, permease protein
           (braE-1) [Archaeoglobus fulgidus DSM 4304]
 gi|2650416|gb|AAB91007.1| branched-chain amino acid ABC transporter, permease protein
           (braE-1) [Archaeoglobus fulgidus DSM 4304]
          Length = 338

 Score = 96.1 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 57/322 (17%), Positives = 124/322 (38%), Gaps = 32/322 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
              L+   +      +    +     I+ +      ++VG  G ++L       +GAY  
Sbjct: 35  ALALIVAAVMPFILPEAYLYILGLAYIFAIMVISWDLMVGYTGQVNLGHTTFVGLGAYVA 94

Query: 82  VILGSRYGL----SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            IL +           L I    +++   G+ +G+ +L+ RG Y ++ T I+  +F   +
Sbjct: 95  AILQTPIRAGLSLHPALAIITGGVVAAGVGLSIGIITLRLRGYYFSLVTAILPLVFMQTV 154

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
             W+ +  G+ G                        ++ +   +  YY  L +  +S  +
Sbjct: 155 FIWRELFGGEEGFA--------------------IENTMLTTTVEKYYFSLAVLVVSLVV 194

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  +  + I   +  +RD+++   SL       K+ AFA+SS F G+AGA     R  +S
Sbjct: 195 MKKVVDSRIGLRFMALRDSEELAESLGINATKYKVLAFALSSFFAGIAGAMVVNYRVTVS 254

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+++     +++I   +LGG+ +L        ++         +   ++   +    S  
Sbjct: 255 PELYGVPLMLLIILSAVLGGLGTLYGPLAGAIVI--------YLAKNWWLGQIIRTLSLP 306

Query: 318 MRHTTLMVIALFLVILMRSHSL 339
           +    ++   L  V ++    L
Sbjct: 307 INDDIVLYALLIAVGILMPEGL 328


>gi|27378035|ref|NP_769564.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27351181|dbj|BAC48189.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 328

 Score = 96.1 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 69/315 (21%), Positives = 130/315 (41%), Gaps = 24/315 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
                Y+ ++ I  L+Y   +   +I+ G  G +SL   + + IGAY+  +L +++G+  
Sbjct: 30  FIKDVYVQNILILTLMYAALSQSWNILSGYCGQISLGHALYFGIGAYTTELLFTKFGVLP 89

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           W  +    +I+    M +G P  + RG Y  IAT++++EI   +   W+           
Sbjct: 90  WFGMLAGGVIAAVIAMGLGYPFFRLRGHYFVIATIVIAEIGLLLFQNWEW---------- 139

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                        +         F+  ++  +Y  L +C L+  +  WL  +     WR 
Sbjct: 140 ---AGAAMGITIPVRGDSWLKFQFMRSKLPYFYFALVLCSLAWFVTWWLEDSKWGFWWRA 196

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVIS 271
           ++DN +A  SL   +  +K+ A AVS+  + + GAF+A     I P+    F  ++++  
Sbjct: 197 VKDNPEAAESLGVVVFNSKMGAAAVSAFLVAIGGAFYAQFLAYIDPESVMGFQFSLLMAL 256

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             +LGG+ +L       AILI + EL           +             +    +  +
Sbjct: 257 PAVLGGIGTLWGPVLGAAILIPMTELTRSYIGGSGRGV----------DLIVYGALIVAI 306

Query: 332 ILMRSHSLLRLRTPS 346
            L     L+ L + S
Sbjct: 307 SLALPRGLVSLFSRS 321


>gi|312881002|ref|ZP_07740802.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Aminomonas paucivorans DSM 12260]
 gi|310784293|gb|EFQ24691.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Aminomonas paucivorans DSM 12260]
          Length = 299

 Score = 96.1 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 72/311 (23%), Positives = 124/311 (39%), Gaps = 40/311 (12%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y   + I + I  + A G+S++ G  G+ SL      A+GAY   IL   YG+     
Sbjct: 3   DGYGQGIVILLCINCIAALGISLLTGFTGIFSLGHAGYMAVGAYVAAILTVEYGVHWLPA 62

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           I +  +++     ++G+P+L+  GDY  IA+L + E  + +L     IT G  G    D 
Sbjct: 63  ILLGGLLAMLVSFVIGVPTLRLLGDYYTIASLGLGEAIRLLLENGGDITLGARGYPGIDG 122

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
              L                          V +G     ++ +  L       A++  RD
Sbjct: 123 FTTLP-------------------------VAVGFLVALSAAMFLLINGNFGRAFKACRD 157

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   L       ++ + A+S  + G+AGA  A     I P MF   ++  + ++V+ 
Sbjct: 158 DYLAASLLGFHTARYRVLSLAISGFYCGVAGALMAGFMSFIQPVMFDGGKSTELTAVVVF 217

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S+S     +AIL  V EL   ++ Y                  +  + L ++++ R
Sbjct: 218 GGLGSMSGCLLGSAILTLVTELFRPISQY---------------RMLIYGLVLVVIMVAR 262

Query: 336 SHSLLRLRTPS 346
              LL     S
Sbjct: 263 PEGLLGQNELS 273


>gi|126462706|ref|YP_001043820.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
 gi|126104370|gb|ABN77048.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
          Length = 642

 Score = 96.1 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 97/303 (32%), Gaps = 26/303 (8%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLIPVSAMISG 104
           IY + A GL+I  G + ++++       +GAY+  +     + Y +SI + +P++  ++ 
Sbjct: 361 IYFLAAIGLAITFGVMRVINMAHGEFIMMGAYTGYVVQQWIADYTISILVALPLAFAVTF 420

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
           A G+ M    +        + TL+ +      L +      G     +            
Sbjct: 421 AAGVAMERLVI-RHLYRRPLETLLATFGISIALQQLAKNIFGTQARPLTAPA-------- 471

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
             +      +  V        + +         +  + RT +    R +  N     S+ 
Sbjct: 472 -WLDGALSFNDVVSISYIRIAIFVLAMIFLGVFLFIMTRTRLGLEVRAVTQNPSMAASMG 530

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                  +  F + S   G+AG          S     +         V++GG+ ++   
Sbjct: 531 INPDRINMLTFGLGSGIAGIAGVAIGLFAKVTSELGQDYIVQS--FMTVVVGGVGNIWGT 588

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
               A++ GV +    +N     +   +   F +                R   ++ L+ 
Sbjct: 589 LAGAAMIGGVQKGIEWLNPSNTLAAQTYMILFIIIFIQF-----------RPRGIVALKG 637

Query: 345 PSN 347
            + 
Sbjct: 638 RAA 640


>gi|121608916|ref|YP_996723.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121553556|gb|ABM57705.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 545

 Score = 96.1 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 50/338 (14%), Positives = 119/338 (35%), Gaps = 31/338 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           ++K      L      L+        +    + + G    IY        +++G+ G+ S
Sbjct: 94  VDKRPIWWLLGLAALFLMPMYMPAQLRGS--LLAAGAVFAIYAAINLCWMLIIGTAGIYS 151

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L         A+    L     +  +LL  + A I    G I+ +P+ +  G Y A+ T+
Sbjct: 152 LASYAVVGSAAFGTAWLSIHLHVPWYLLPFLGAGIGLVFGAIIAIPATRLDGFYYALLTI 211

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++E+ +   ++ K   + + G             +     +     +     +  +Y  
Sbjct: 212 GLNELCRVYTLQSKAFGSARGG-------------LYGADSYIPESWTADNQSLLAFYAA 258

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN-TTIIFAKLSAFAVSSAFIGMAG 246
           L +  L+ ++   +  T +    R   + ++AF          A++  F +SS  +G  G
Sbjct: 259 LVLMLLALALFRAVNGTRLGRVLRMAPEKREAFAEATGVNFRGARIMVFVISSVALGFIG 318

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
            F+ A    +   +F F   ++ + ++++GG+           I++ + ++         
Sbjct: 319 GFYTAHYRGVGFSIFSFDTVLLGLGMLVIGGIGRAEGAVVGALIVVFLDKVL-------- 370

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                           L+ + +  V+L     L  ++ 
Sbjct: 371 -------MPLGPIRLILIGLIMLGVVLFLRQGLFGIKQ 401


>gi|307702038|ref|ZP_07639046.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus mitis NCTC 12261]
 gi|322376941|ref|ZP_08051434.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus sp. M334]
 gi|307616683|gb|EFN95872.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus mitis NCTC 12261]
 gi|321282748|gb|EFX59755.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus sp. M334]
          Length = 318

 Score = 95.7 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 77/325 (23%), Positives = 137/325 (42%), Gaps = 42/325 (12%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L+ + +       +   +  QI I ++ A GL+++VG  G  SL      AIGAY+  I+
Sbjct: 21  LISVLVSVGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80

Query: 85  G--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           G  S    + +  + V A++SGA  +++G+P+L+ +GDYLA+ATL +SEI +  +I    
Sbjct: 81  GSKSPTYGAFFGAMLVGALLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +TNG AGI                                    +     ++    L   
Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+  A     + P  + 
Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  +I V+ IV+ GG+ S++    +  +L  +  L   +                     
Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVSAIVLGILNMLLQDV---------------ASVRMI 280

Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347
           +  +AL LV++ R   LL     S 
Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305


>gi|303327416|ref|ZP_07357857.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Desulfovibrio sp. 3_1_syn3]
 gi|302862356|gb|EFL85289.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Desulfovibrio sp. 3_1_syn3]
          Length = 346

 Score = 95.7 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 54/332 (16%), Positives = 105/332 (31%), Gaps = 7/332 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  +  ++ L   L+   +    Y   +   I I ++ A  L+++ G  GL SL      
Sbjct: 9   LLNIVAMFLLGCVLWQAESFLGDYQIYIAKLIFINIILALSLNLIYGFTGLFSLGQAGFI 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GAY   +          + I    +       +                         
Sbjct: 69  AVGAYVSALCILPPEQKEMMWILEPII--WPFSELFTPFWTSVLAGGFVAMIFAFLIAVP 126

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    +     G     R+      V +            I          G    +
Sbjct: 127 VLRLGDDYLGIATLGFAEIIRV----LIVNATAVTNGSLGIKGIPSHATLLACYGWTLFT 182

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             ++  L  +   N  R IRDN+ A   +   +   K+ +F + + F G+ GA   +   
Sbjct: 183 LIVLARLVFSNFGNVLRCIRDNEIAASVMGINVFRYKVLSFCIGAFFAGVGGALLGSHLS 242

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            I P MF F     V+  V+ GG+ SL+       ++  ++E    +        ++   
Sbjct: 243 TIDPKMFNFLLTFNVLMFVVAGGLGSLTGSILGATVITILLEWLRAIEEPMNLGFIELP- 301

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                   +  + L  +IL R   ++  R  +
Sbjct: 302 GIPGMRMVVFSLVLLAIILYRREGIMGTRELT 333


>gi|319956563|ref|YP_004167826.1| amino acid/amide ABC transporter membrane protein 2, haat family
           [Nitratifractor salsuginis DSM 16511]
 gi|319418967|gb|ADV46077.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Nitratifractor salsuginis DSM 16511]
          Length = 342

 Score = 95.7 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 64/334 (19%), Positives = 119/334 (35%), Gaps = 45/334 (13%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL----------- 84
             Y  S+   I I+ + A   +++ G  G  SL      AIGAY   +            
Sbjct: 26  DSYTLSILNNIGIFAILALSYNLINGVTGQFSLEPNGFVAIGAYMTALFLLPADAKLDMF 85

Query: 85  --------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                     +        +    + +    +++  P  + RGDYLAI TL    I +  
Sbjct: 86  ALVDPAPIVLKMHADFIPAVIAGGLFAMFIALLLSFPVFRVRGDYLAIVTLGFGFIIRIF 145

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            I     TNG  G+                                 +  +  +  ++  
Sbjct: 146 AINNPAYTNGALGLNDIPP-------------------------YANFLWIGSIALVTFI 180

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++L +  +    A + +RD++ A  ++     + K +AF  S+ F G+ G   A+    I
Sbjct: 181 VMLHIVFSRYGRAMKAVRDDEDAATAMGINTFWIKTTAFMTSAFFEGVGGGLLASFLTTI 240

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SPD F F     ++ I++LGG+ S++    AT +++G +E    ++              
Sbjct: 241 SPDQFTFLLTFQLLIIIVLGGLGSMTGSLVATILVMGSMEWLRFLDSDMVIFGHHTGAHP 300

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            M    +  I L +++L     L   +     L 
Sbjct: 301 GM-RMVVFAILLIIMMLFARKGLFGDKELIEILR 333


>gi|288959758|ref|YP_003450098.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288912066|dbj|BAI73554.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 545

 Score = 95.7 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/331 (12%), Positives = 105/331 (31%), Gaps = 18/331 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           LA      +   L    + + +        + ++ A GL++  G +G++++       IG
Sbjct: 232 LAASAAATVEQKLAFWAALQNLWYGLSLGSVLLLAAIGLAVTFGVMGVINMAHGEMVMIG 291

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  ++   +      L  +S +++     ++            ++   +     + +L
Sbjct: 292 AYTTFLVQEFFRAHAPGLFDLSILVALPAAFLVSGGVGIIIER--SVIRWLYGRPLETLL 349

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
             W      +  +              S      F    +       ++++    + A++
Sbjct: 350 ATWGLSLALQQAVRSIFGPTNREVGAPSW-MSGAFELGGLTITYGRLWIVVFAFAVFAAL 408

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           ++ L+RT    + R +  N+    ++           F + S   G+AG   A S+    
Sbjct: 409 LVALKRTWFGLSIRAVTQNRPMANAMGIRTARVDALTFGLGSGIAGLAGV--ALSQIDNV 466

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
                    +    +V+ GG+ +L         L  + +                     
Sbjct: 467 SPNLGQGYILDSFMVVVFGGVGNLWGTLVGALTLGSMNKFLEPYAGAVLGK--------- 517

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                L++I + L I  R   L  L+  +  
Sbjct: 518 ----ILVLIFIILFIQRRPRGLFALKGRAVE 544


>gi|264676368|ref|YP_003276274.1| High-affinity branched-chain amino acidtransporter permease livM
           [Comamonas testosteroni CNB-2]
 gi|262206880|gb|ACY30978.1| High-affinity branched-chain amino acidtransport system permease
           protein livM [Comamonas testosteroni CNB-2]
          Length = 641

 Score = 95.7 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 59/315 (18%), Positives = 124/315 (39%), Gaps = 33/315 (10%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            +    ++   Y   +   I +  +FA  L  ++G  GL S      + +GAY   +L  
Sbjct: 337 PMMASGSEGGSYATVLLADIFVAALFASSLHFILGPGGLHSFGHAAYFGLGAYGAALLVR 396

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              L +   + +  + + A  ++ G   ++  G YL + TL  ++I   I+ +W   T G
Sbjct: 397 TLDLPMEAALLLGPLAAAAGALLYGWFCVRLSGVYLTMLTLAFAQISWAIVFQWDDFTGG 456

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             G+       +                         Y++ LG+C L   ++  L  + +
Sbjct: 457 SNGLTGVWPPEW------------------ASQGSTFYWLALGICALGIYLLRRLLFSPL 498

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A R  RD+     ++   +   + +AF ++  F G+AGA FA S+  ++PD    +++
Sbjct: 499 GYALRASRDSALRADAIGIDVRRIQWTAFVIAGLFAGLAGALFAFSKGGVAPDAMSVTKS 558

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           +  + +V+LGG+ +L+      A    + +       Y+                 LM  
Sbjct: 559 VDALVMVLLGGVQTLAGPVVGAAAFTWLHDTVARNTEYWRA---------------LMGA 603

Query: 327 ALFLVILMRSHSLLR 341
            + +++L+    +  
Sbjct: 604 TMLILVLLAPQGIAG 618



 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 96/305 (31%), Gaps = 17/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96
           + +         + + GLS++ G    ++      Y +GA+     +      +  W  +
Sbjct: 10  LLNGLASASSLFLVSVGLSLIFGVTRTINFAHGSFYMLGAFIAYSSVDLLSPHIGFWPAL 69

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ +  GA G +     L+       +  L+ +     ++        G          
Sbjct: 70  LLAPLACGALGALTETLLLRRIYKAPELFQLLATFALVLVIKDAALWLWGP--------- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                  R+             +  +  +++     +   + L L RT      R    +
Sbjct: 121 -EELFGPRAAGLEGSVEILGRQFPTYDLFLIAVGPCVLLGLTLLLTRTRFGTLVRAATQD 179

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +L     +   + FA+ +   G+ GA                        +V++G
Sbjct: 180 REMVGALGVNQAWLFTAVFALGTLLAGLGGALQLPREPA--SLEMDMLTIGAAFVVVVVG 237

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM S+     A  ++    EL     +     +   + SF+     +  + + +V++ R 
Sbjct: 238 GMGSIPGAFIAALLVA---ELKAVCIWLGVQEIAGLELSFSKLTLVVEFLVMAVVLIWRP 294

Query: 337 HSLLR 341
             LL 
Sbjct: 295 WGLLG 299


>gi|260655477|ref|ZP_05860965.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Jonquetella anthropi E3_33 E1]
 gi|260629925|gb|EEX48119.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Jonquetella anthropi E3_33 E1]
          Length = 351

 Score = 95.7 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 52/313 (16%), Positives = 109/313 (34%), Gaps = 7/313 (2%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            +Y+  +   + +  + A  L++V G  G+ SL      AIGAY   IL           
Sbjct: 36  DRYVVRVVNLVAVNAILALSLNLVYGFAGMFSLGHAGFMAIGAYVSAILIISPAQK--AA 93

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + +   +     ++     +      +  A + +      + +    +     G     R
Sbjct: 94  MYILEPMMWPFNVMQAPFFVSVLAGGVIAALVSLVIALPVLRLGGDYLGIATLGFAEIIR 153

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           +     T  +                + Y  ++     +  +I+ L  +   N  + +RD
Sbjct: 154 VVLTNITPVTNGALGLKGIPAYADLFWNYVWMII----TVYVIVKLLSSNFGNTIKAVRD 209

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  ++       ++ AF + + F G+ GA   +    I P MF F     ++ IV+ 
Sbjct: 210 DEVAARAMGINTFRVRVIAFVIGAFFAGVGGALQGSLITTIDPKMFNFQLTFNILMIVVA 269

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S++      AI+  ++E    +        L            +  + L L+IL R
Sbjct: 270 GGLGSITGSMVGAAIITVLLEWLRFVENPMTIGSLTIP-GIPGMRMVIFSVVLLLIILYR 328

Query: 336 SHSLLRLRTPSNF 348
              ++     S  
Sbjct: 329 RQGIMGNWEFSWE 341


>gi|296129817|ref|YP_003637067.1| inner-membrane translocator [Cellulomonas flavigena DSM 20109]
 gi|296021632|gb|ADG74868.1| inner-membrane translocator [Cellulomonas flavigena DSM 20109]
          Length = 328

 Score = 95.7 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 63/316 (19%), Positives = 118/316 (37%), Gaps = 8/316 (2%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           +G   + Y + A GL+I  G  GL+++       +GAY + I   +    +WL   V+ +
Sbjct: 15  LGPTAIAYALAAIGLNIHFGLTGLINMGQAGFMLLGAYGFAIATIQGAP-LWLAFVVAIV 73

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIYVADRLYFL 159
            +    +++GLP+LK RGDYLAI T+  +EI + I        +T G  G+         
Sbjct: 74  AAVVFALLLGLPTLKLRGDYLAIVTIAAAEIVRMIGRSTALTDVTGGSEGLTGNAFKGTF 133

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI----ILWLRRTAISNAWRTIRD 215
                     +      +       + L  + +    +    +  L R+      + IR+
Sbjct: 134 QDASPFPDARWSLGPITLATNTSNSWWLRIVGWSLVLLACLLVWRLVRSPWGRVLKGIRE 193

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  SL   +   KL A  +   F  + G  F      +  D           +I++L
Sbjct: 194 DEDAVRSLGKNVYGYKLQALVLGGVFGALGGIVFVL-ASSVQADSLGRPVTFNTWTILLL 252

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  ++      + +  G +    G       + +            L+ + L L+I+ R
Sbjct: 253 GGAATVFGPVLGSLLFWGALVFVRGFLRGVVPADVLSVQQIEQIGWILVGVTLMLLIIFR 312

Query: 336 SHSLLRLRTPSNFLER 351
              +L  +       R
Sbjct: 313 PQGILGDKKELAINAR 328


>gi|332670344|ref|YP_004453352.1| inner-membrane translocator [Cellulomonas fimi ATCC 484]
 gi|332339382|gb|AEE45965.1| inner-membrane translocator [Cellulomonas fimi ATCC 484]
          Length = 328

 Score = 95.7 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 63/310 (20%), Positives = 119/310 (38%), Gaps = 8/310 (2%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
               Y + A GL+I  G  GLL++       +GAY + I        +W  + V+   + 
Sbjct: 18  TTAAYALAAIGLNIHFGLTGLLNMGQAGFLLLGAYGFAIATIAGWP-LWAAVLVAIAAAT 76

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-----LIKWKPITNGKAGIYVADRLYFL 159
              +I+G+P+LK RGDYLAI T+  +EI + +     L      ++G  G          
Sbjct: 77  VFALILGIPTLKLRGDYLAIVTIAAAEIVRLVGRSTALTDLTGASSGLRGNQYKYSFQDA 136

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVL-LGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                       F  +      +   ++  G+  L+  ++  L R+      + IR+++ 
Sbjct: 137 SPFPDGTWALGPFEYAVNASNSWWVRIVGWGVVALACLLVWLLVRSPWGRVLKGIREDED 196

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL   +   K+ A  +      +AG  +      + PD    S    + +I++LGG 
Sbjct: 197 AVRSLGKNVYSYKMQALVLGGVIGSLAGILYVLP-RAVQPDSMGRSMTFFIWTILLLGGA 255

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++      + I   V+ L          + +            ++ +AL L+I+ R   
Sbjct: 256 ATVFGPVLGSIIFWAVLALVKLTLREVVPTTVLRSEQIEQFGWIVVGVALMLLIIFRPQG 315

Query: 339 LLRLRTPSNF 348
           +L  +     
Sbjct: 316 ILGDKKELAI 325


>gi|91779437|ref|YP_554645.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91692097|gb|ABE35295.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter membrane protein 1,
           HAAT family [Burkholderia xenovorans LB400]
          Length = 646

 Score = 95.7 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 70/336 (20%), Positives = 147/336 (43%), Gaps = 33/336 (9%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
             L    K L  LA +  L+L L   A  +  Y+  + ++ILI V+FA  L  ++G  G+
Sbjct: 313 TPLRPAGKRLKWLAAIALLVLVLAPLAANAFPYMPVLLVEILIAVLFATSLHFIMGPGGM 372

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
            S      + +GAY   +      L +   + +  +++ A  ++ G   ++  G YLA+ 
Sbjct: 373 HSFGHAAYFGLGAYGAALFLKVLDLPMEAALLLGPLLAVAGALVFGWFCVRLSGVYLAML 432

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL  ++I  +++ +W  +T G  GI                     +PS+++   +  YY
Sbjct: 433 TLAFAQIVWSVVFQWDDVTGGSNGI------------------LGLWPSNWLSSPVAFYY 474

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + L    +   ++  +  + +  A R  RD+     ++   +   + +AF ++S F G+A
Sbjct: 475 LTLACVVVGVWLLRKMLFSPLGYAMRASRDSMLRAEAIGIDVKRVQWAAFVIASLFCGLA 534

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G+ +A S+  ISP++   S ++  + +V+LGG+ +L+      A+   + +       Y+
Sbjct: 535 GSLYAFSKGTISPEVISVSRSVDGLVMVLLGGLQTLTGPIVGAAVFTWLQDTVARQTDYW 594

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                            L+  A+ L+++     ++ 
Sbjct: 595 ---------------QALLGFAILLLVIAFPQGIVG 615



 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 92/307 (29%), Gaps = 18/307 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95
           + +         + A GLS++ G   +++      Y  G   AYS            W  
Sbjct: 9   LVNGLADASTLFLVAAGLSLIFGVTRIVNFAHGSFYMFGIYVAYSIASRFGHTAGGFWFS 68

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  +A++    G ++ +  L+       +  L+ +     I         G   ++    
Sbjct: 69  VLAAALVVAVLGALVEMLVLRRIYQAPELFHLLATFALVLIFRDAALWLWGPEDLFGPRA 128

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                     +   +++    +   +   L RT      R    
Sbjct: 129 P----------HLAGAVDFLGHPLPTYDIALIVIGPVVLLLLWYALTRTRWGTLVRAATQ 178

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++   +L     +     F V +   G+ GA                        +V++
Sbjct: 179 DREMLGALGINQAWLFTGVFFVGAFLAGLGGALQGPRMSA--NLSLDLETIGNAFVVVVV 236

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S+     A  I+  +  LC G+      ++     S +        + + +V+++R
Sbjct: 237 GGMGSIPGAFIAALIIAEIKALCIGIGH---VTIFGVGLSLSRFTLVAEFVVMAVVLVVR 293

Query: 336 SHSLLRL 342
              LL  
Sbjct: 294 PWGLLGR 300


>gi|27381345|ref|NP_772874.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354512|dbj|BAC51499.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 332

 Score = 95.7 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 57/323 (17%), Positives = 121/323 (37%), Gaps = 28/323 (8%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+ P+ +   L      +   ++ + +LIY +   G +++ G  GLLS      +  GAY
Sbjct: 26  VLLPIAVLAVLPWLLPSQ---ALAVNVLIYGVVVMGYNLLFGYTGLLSFGQAAFFGAGAY 82

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              I   RYG+  +  +P++ ++S      +G+ S + RG Y ++ TL ++++   + ++
Sbjct: 83  FTGIAIGRYGVPWFAAVPIAVLLSTCLAAAIGIVSTRTRGIYFSMVTLALAQLVYYVALQ 142

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
               T G+ G                        S   +  I  YYVL+    L+     
Sbjct: 143 ASSFTGGENG----------LRGFTVDRINLFGLSVNFLDPINKYYVLMVFAALALWFQS 192

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +        IR+N++   +    +  +KL  F +S A   + G   A     +  D
Sbjct: 193 RILNSPFGAVIEAIRENEQRARACGYDVERSKLIVFMLSGAISSLGGCMLALHLSIVPLD 252

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  +  + +++ +V+LGG  S        A  + + ++      ++              
Sbjct: 253 ILHYQTSGMIVMMVLLGGARSFFGPFVGAASFLILEDVISLWTPHW-------------- 298

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
               +     L +L     +   
Sbjct: 299 -QIFVGAIFVLFVLFLPKGIWGT 320


>gi|304391521|ref|ZP_07373463.1| inner-membrane translocator [Ahrensia sp. R2A130]
 gi|303295750|gb|EFL90108.1| inner-membrane translocator [Ahrensia sp. R2A130]
          Length = 401

 Score = 95.7 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 62/366 (16%), Positives = 126/366 (34%), Gaps = 34/366 (9%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKY------IDSMGIQILIYVMFAWGLSIVVGS 62
            +  +IL L+A++     F                    +  + +I+ +FA G +I+ G 
Sbjct: 6   ARDLQILLLVAILTMFAPFFLNPFPVDSSLAQFNAGYPDLMQRFVIFGIFAIGFNILFGL 65

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G LS         G+Y+ + +     ++I   I +S +++G   + +G  SL+  G Y 
Sbjct: 66  TGYLSFGHAAFLGAGSYAAIWMMKLLTMNIIPAITLSIIVAGLFSLAVGYISLRRSGIYF 125

Query: 123 AIATLIMSEI----FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS---- 174
           +I TL  +++      ++L        G        R+           R   F      
Sbjct: 126 SILTLAFAQMSYSLAYSVLTPITGGETGLQPKSNDPRILDGALEPGEQARASLFGMEMSS 185

Query: 175 -------SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                   +V      YYV   +  +S    + + R+      R ++ NQ        + 
Sbjct: 186 SYELVVSGWVFTFNVGYYVAAFLMLVSFYASIRIFRSPFGLMLRAVKSNQNRLGYTGVSA 245

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
               L+AF +S  + G+AG    A   +   +   ++ +  V+ + ILGG  +L      
Sbjct: 246 RPYNLAAFVISGMYAGLAGGLMVAMDTQAGAERMFWTASGEVVLMTILGGAGTLIGPVLG 305

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSF-------------NMRHTTLMVIALFLVILM 334
             ++  +  +   +N     S   +   F                    + +   LV++ 
Sbjct: 306 AGMIKYMENIISKINQSVLESWFAWAPDFLQDFIVAVIYPFVGKGWHLTLGLMFMLVVIF 365

Query: 335 RSHSLL 340
               L+
Sbjct: 366 LPGGLM 371


>gi|307728868|ref|YP_003906092.1| urea ABC transporter permease UrtB [Burkholderia sp. CCGE1003]
 gi|307583403|gb|ADN56801.1| urea ABC transporter, permease protein UrtB [Burkholderia sp.
           CCGE1003]
          Length = 548

 Score = 95.7 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 80/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ + +       +    +++              
Sbjct: 274 ITYGLIGVINMAHGEFLMIGAYATYVVQNLFQRMAPGAVDWYPLVAVPASFAAAALVGIV 333

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 334 IER--LVLKHLYGRPLETLLTTFGISLILIQATRMLFGAQNVQVVNPSWMSGGVTVLPGL 391

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 392 ILPYNRLAILAFALIVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 451

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  L+        L  V + 
Sbjct: 452 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTVIGGFGLGLVSKA 509

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 510 IEPFWGAVLAK-------------IAVLVLIVLFIQKRPQGMFALKGRSAE 547


>gi|77463871|ref|YP_353375.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|77388289|gb|ABA79474.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
          Length = 642

 Score = 95.7 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 97/303 (32%), Gaps = 26/303 (8%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLIPVSAMISG 104
           IY + A GL+I  G + ++++       +GAY+  +     S Y +SI + +P++  ++ 
Sbjct: 361 IYFLAAIGLAITFGVMRVINMAHGEFIMMGAYTGYVVQQWISDYTISILVALPLAFAVTF 420

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
           A G+ M    +        + TL+ +      L +      G     +            
Sbjct: 421 AAGVAMERLVI-RHLYRRPLETLLATFGISIALQQLAKNIFGTQARPLTAPA-------- 471

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
             +      +  V        + +         +  + RT +    R +  N     S+ 
Sbjct: 472 -WLDGALSFNDVVSISYIRIAIFVLAMIFLGVFLFIMTRTRLGLEVRAVTQNPSMAASMG 530

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                  +  F + S   G+AG          S     +         V++GG+ ++   
Sbjct: 531 INPDRINMLTFGLGSGIAGIAGVAIGLFAKVTSELGQDYIVQS--FMTVVVGGVGNIWGT 588

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
               A++ GV +    +N     +   +   F +                R   ++ L+ 
Sbjct: 589 LAGAAMIGGVQKGIEWLNPSNTLAAQTYMILFIIIFIQF-----------RPRGIVALKG 637

Query: 345 PSN 347
            + 
Sbjct: 638 RAA 640


>gi|315651969|ref|ZP_07904971.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Eubacterium saburreum DSM
           3986]
 gi|315485798|gb|EFU76178.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Eubacterium saburreum DSM
           3986]
          Length = 319

 Score = 95.7 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 79/335 (23%), Positives = 145/335 (43%), Gaps = 44/335 (13%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +++NK   I  ++ ++   L+F+ + +    +   S+ + I + +M A  L++V G LG 
Sbjct: 1   MKVNKKTIINIVIMLLAYALVFVLINSGVLSRQYKSLIVPICVNIMLAVSLNLVTGFLGE 60

Query: 66  LSLNCVIAYAIGAYSYVI------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           LSL      +IGAYS  +            L+ +  +    + +   G ++G+P L+ RG
Sbjct: 61  LSLGHAGFMSIGAYSSALLSIALSNTFPPVLAFFTALICGGISAAFFGFLIGVPVLRLRG 120

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           DYLAI TL   EI    +I +  IT G  G+                             
Sbjct: 121 DYLAIVTLAFGEII-KSIINYLKITGGSKGLSKIPLYSDYKN------------------ 161

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
               + V+  +  ++  +I  L  +    A ++IRDN  A  S+   I   K+ AF +++
Sbjct: 162 ----FTVVFVIMVITIVLISNLIDSRDGRAIKSIRDNDIAAESIGINISRYKVMAFVIAA 217

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            F G+AGA +A +   I P +F ++++I ++  V+LGGM ++     +  IL  + E   
Sbjct: 218 GFAGIAGALYAHNVGIIKPGIFDYNKSIEILVFVVLGGMGNIPGSIISAIILTLLPEFLR 277

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           G                +     L  I L ++++ 
Sbjct: 278 G---------------ADNLRMLLYAIVLIVMMIF 297


>gi|292670003|ref|ZP_06603429.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Selenomonas noxia ATCC
           43541]
 gi|292648304|gb|EFF66276.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Selenomonas noxia ATCC
           43541]
          Length = 316

 Score = 95.7 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 68/334 (20%), Positives = 131/334 (39%), Gaps = 41/334 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L K D  + ++A+V   ++     A     +     I   + ++ A  L+++ G  G  S
Sbjct: 4   LQKNDLKMLIVALVIYAVIMGLTEAGMLSAFWQLNLIFAGLNIILAASLNLINGYTGQFS 63

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      A+GAY  V+L + + +   + +    + +G  G ++GLP+L+ RGDYLAIATL
Sbjct: 64  LGHAGFMAVGAYVGVVLTTNFQMPFPVALLAGGVSAGLLGALIGLPTLRLRGDYLAIATL 123

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            + EI + ++I    +                                  I  +  +  +
Sbjct: 124 GLGEIVRIVIINVPYVGGAA--------------------------GFKGIQHLTNFTWV 157

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +   +  II     +    A   IR+N+ A  S+       K+ AF + + F G+AG 
Sbjct: 158 FFIMLAALFIIKNFVNSRHGRACLAIRENEIAAESMGIYTTKYKVLAFTIGAFFAGVAGT 217

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            F  +   +SP  F F ++  ++ +V++GG+ S++       ++  +             
Sbjct: 218 LFGHNMYILSPASFTFMQSFNILIMVVMGGLGSMTGSIAGALVVTFLSAALASF------ 271

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                          +  +AL L++  R   L  
Sbjct: 272 ---------PNARMIIYALALILLMFYRPQGLFG 296


>gi|220922013|ref|YP_002497314.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219946619|gb|ACL57011.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 339

 Score = 95.7 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 55/302 (18%), Positives = 110/302 (36%), Gaps = 25/302 (8%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++ + +LIY ++A G +++ G  GLLS      +  GAY   I     GL   L + +  
Sbjct: 51  ALAVNVLIYGLYAVGYNLLYGYTGLLSFGHAAFFGTGAYFTGIAIGAVGLHPLLAMGLGT 110

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           + +    + +G  S++ RG Y A+ TL ++++     ++    T G+ G           
Sbjct: 111 VAASGLALAVGAVSIRSRGIYFAMVTLALAQLVYYAALQASSWTGGENG----------L 160

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                        S  ++  +  Y  +L     + S+I  +  +    A   IR+N+   
Sbjct: 161 RGFTVSRIDLGPVSLDILNPLVKYLFVLAFVGGALSMISRILASPFGAAIEAIRENEIRA 220

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +    +  +KL AF +S  F G++GA  A     +  D   +  + + + + ++GG  +
Sbjct: 221 RACGFDVERSKLLAFVLSGLFCGLSGALSAIHLSIVPLDSLAYHTSGMAVVMTLVGGAGT 280

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                                       L      +      ++     L +L     LL
Sbjct: 281 FFGPFVGA---------------LVVLVLEDVLSLWTSHWQLVLGTVFILFVLFLPRGLL 325

Query: 341 RL 342
             
Sbjct: 326 GT 327


>gi|319796337|ref|YP_004157977.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315598800|gb|ADU39866.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 354

 Score = 95.7 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 69/328 (21%), Positives = 132/328 (40%), Gaps = 17/328 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +  +V  L+ F+ +    S  ++ ++    LI  + A GL+I+VG  G +SL      A+
Sbjct: 27  IAMLVLLLVAFIVVPLGVSDYWMRAILTPFLILSLAALGLNILVGYCGQISLGTGAFMAV 86

Query: 77  GAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GAY+      R      +  + +  + +   G++ G+PSL+ +G YLA+ATL        
Sbjct: 87  GAYAAYNFQVRIDGMPLIASLLLGGLCATVIGVLFGIPSLRIKGLYLAVATLAAQFFTDW 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             ++ +                   ++    +         +   +  Y   L    + A
Sbjct: 147 AFLRIQWF-------------TNNSSSGSVSVAGLNVFGVPIESPVQKYLFCLIFVVVFA 193

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRD 254
            +   L R+AI   W  +RD   A   +    ++AKL+AFAVSS  +G+AGA +      
Sbjct: 194 LLAKNLVRSAIGREWMAMRDMDVAAAVIGIRPVYAKLTAFAVSSFIVGVAGALWGFIHLG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
              P  F    +  ++ +VI+GG+ S+       A ++ +      +    +        
Sbjct: 254 AWEPAAFSIDRSFQLLFMVIIGGLGSIMGSFFGAAFIVLLPLFLNQL--PAWLGFSISTA 311

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
             +   T +    +   +++  H L RL
Sbjct: 312 LASHLETMIFGALIVFFLIVEPHGLARL 339


>gi|300712468|ref|YP_003738281.1| inner-membrane translocator [Halalkalicoccus jeotgali B3]
 gi|299126152|gb|ADJ16490.1| inner-membrane translocator [Halalkalicoccus jeotgali B3]
          Length = 367

 Score = 95.7 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 55/306 (17%), Positives = 120/306 (39%), Gaps = 22/306 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +  ++  ++L++ + A  L  V G  GLLS      +  G Y+  IL      +  +++
Sbjct: 56  PFWLNLLTRMLVFALLALSLDFVFGYAGLLSFGHAAMFGAGGYAAAILVREVTSNALVVL 115

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++A+        +G  S++ +G Y A+ TL  +++F  I+    P         +    
Sbjct: 116 PLAALSGVVVAGFIGWFSVRAKGIYFAMLTLAFAQMFYVIVFTDLP------ARLLGAEA 169

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G      I  +          +  +Y+ L +  LS ++++ +  +      + IR+N
Sbjct: 170 ITGGDDGLFGIPLYEAVGIDFTSRLLYFYLALVLVMLSFALLVRVANSPFGRTLQGIREN 229

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++    L   +   KL AF++S  F G+AG  +   +    P +  ++ +  ++ +++LG
Sbjct: 230 EERMRFLGYNVRRYKLVAFSISGGFAGLAGGLYVPFQSVAQPGLLHWTISGELVVMLLLG 289

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM +L       A +I + E                          ++     +V++   
Sbjct: 290 GMGTLWGPMLGGAFVIYLEERLAEFA----------------TWEIILGSVFVIVVIFAP 333

Query: 337 HSLLRL 342
             L   
Sbjct: 334 QGLAGT 339


>gi|253580173|ref|ZP_04857440.1| inner-membrane translocator ABC transporter [Ruminococcus sp.
           5_1_39B_FAA]
 gi|251848692|gb|EES76655.1| inner-membrane translocator ABC transporter [Ruminococcus sp.
           5_1_39BFAA]
          Length = 333

 Score = 95.7 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 71/326 (21%), Positives = 137/326 (42%), Gaps = 24/326 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +   L++   +        +  + + + +Y++ A  L++ VG LG LSL       IG
Sbjct: 1   MVLAAYLIVQGMIAGNLLSNLMQGLLVPLCVYIILALSLNLTVGILGELSLGHAGFMCIG 60

Query: 78  AYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           A++                   ++ + + A+ +G  G ++G+P L+ +GDYLAI TL   
Sbjct: 61  AFTSAAFTKATMDTFTNAGLRFFVALIIGAVCAGIFGFLIGIPVLRLKGDYLAIVTLAFG 120

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           EI +NI+       +     +       LG      +                + + + +
Sbjct: 121 EIIKNIINVLYVGIDSNGIHFSMKDQMSLGMEPGGKMIISGAMGITGTPRQSTFTIGVIL 180

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++  ++L L  +    A   IRDN+ A  S+   I   KL AFA+S+A  G+ G  +A
Sbjct: 181 ILVTLFVVLNLINSRDGRAIMAIRDNRIAAESIGIDITKYKLKAFAISAALAGIGGVLYA 240

Query: 251 ASRDRIS--PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            +   ++  P  F ++ +I+ +  V+LGG+ ++     A  IL  + EL  G++ Y    
Sbjct: 241 HNLATLTALPKNFGYNMSIMFLVFVVLGGIGNMRGSIIAAVILNLLPELLRGLSDY---- 296

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILM 334
                            I L +++L+
Sbjct: 297 -----------RMLFYAIVLIVMMLI 311


>gi|226356194|ref|YP_002785934.1| branched-chain amino acid ABC transporter permease [Deinococcus
           deserti VCD115]
 gi|226318184|gb|ACO46180.1| putative Branched-chain amino acid ABC transporter, permease
           component [Deinococcus deserti VCD115]
          Length = 607

 Score = 95.7 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 5/282 (1%)

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
            I   +   +  +         WL + +S   +   G+++GLP LK +GDYLAI TL + 
Sbjct: 287 AIMVLMSGQANALATGIDPSFFWLFLALSIAAAAIVGVLIGLPVLKLKGDYLAIITLGLG 346

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           E+ + +       + G  G+              +    F      +++   +  +++  
Sbjct: 347 EVIRVLANNLDLYSAGSQGVTPIKSASVPVFDRFAASLGFAPDQHNLLFLYLLVLLVIAA 406

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 + + L R+ I  AW  IRD++ A  ++   ++  KL AFA  ++F G+ G  FA
Sbjct: 407 V---LIVNIRLDRSRIGRAWIAIRDDEVAAQAMGVPLVKTKLIAFATGASFAGVMGMIFA 463

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           A +  +SP+ F F+++I V+S+VILGGM S   +    A++  +             ++ 
Sbjct: 464 AKQTFVSPESFNFNQSIGVLSMVILGGMGSFPGVILGAAVVTLLNLRVLPGIGEATANVS 523

Query: 311 KFDCSFNMRHT--TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                 N       +    L  ++L+R   LL  R  +  L 
Sbjct: 524 WIPQQANPGQLQRLIFGAILVAMMLLRPEGLLPSRRRALELH 565



 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 31/53 (58%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +   +  + IQI+I+   A GL+IVVG  GLL L  V  +A+GAY + I  S 
Sbjct: 100 ADTSLLDLSIQIMIFAALALGLNIVVGLAGLLDLGYVAFFAVGAYVWGIFASP 152


>gi|311109158|ref|YP_003982011.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310763847|gb|ADP19296.1| inner-membrane translocator 64 [Achromobacter xylosoxidans A8]
          Length = 324

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 67/319 (21%), Positives = 127/319 (39%), Gaps = 26/319 (8%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
            Q Y   +   +L++       +IV G    +SL     + +GAY+  +L  RYG+S WL
Sbjct: 26  DQGYGIRVMTLVLLFAAMGQSWNIVGGLANQISLGHAAFFGLGAYTSTLLLMRYGISPWL 85

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
            I  +  ++ A G ++ LP+++ RG Y A+ATL   E+ + I   W  +T G  G+ +  
Sbjct: 86  GIIAAMAVAAAAGALLSLPTMRLRGHYFALATLAFGEVLRAIANTWASVTGGPVGVSIPF 145

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                    +S               I  YY++LG   +++ +   + R+ +    R ++
Sbjct: 146 SEGLAQMQFKS--------------SIPYYYLMLGAAVITSIVFALISRSRLGYRLRAVK 191

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK--FSENIIVISI 272
            N +A   +       ++ A  +S+A +G  G  +A       PD        ++ V  I
Sbjct: 192 ANPQAAEVIGVNTARTRILAAVISAALMGACGTLYAQFIYFFDPDTVFSLVGISVRVALI 251

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            I+GG+ +++       ++I + E+       +     +      +    L+        
Sbjct: 252 CIIGGVGTVTGPLIGALVIIPLEEVFNDWLSGHTAGASQLAFGLILIAIILI-------- 303

Query: 333 LMRSHSLLRLRTPSNFLER 351
                 L  L T    L R
Sbjct: 304 --EPRGLSALWTRLRNLTR 320


>gi|300788983|ref|YP_003769274.1| branched-chain amino acid ABC transporter ATPase/permease
           [Amycolatopsis mediterranei U32]
 gi|299798497|gb|ADJ48872.1| fused ATPase and permease components of ABC-type branched-chain
           amino acid transport system [Amycolatopsis mediterranei
           U32]
          Length = 914

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 63/325 (19%), Positives = 129/325 (39%), Gaps = 18/325 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L           +  T +   I +  I  L   + +  L +V G  G +SL  +    +
Sbjct: 325 VLVPAIVSTGVGVVVLTATHGSIRAAVITSLTLGVISLSLVVVTGFAGQISLAQLTLAGV 384

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+S   L + +G+       ++A+++   G+++GLP+L+ RG   A+ T+ ++   +  
Sbjct: 385 GAFSLSKLSTAWGIPFPFAPVLAAVVAMVIGVVIGLPALRIRGLPAAVVTVALAVALEAF 444

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
             +   +  G  G  +     F               +      +    + LG+  L+  
Sbjct: 445 WFRNTELNGGLDGSKIPPPRLFGLD--------LGIGAGQGYPRLPFALLCLGVLVLAGL 496

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            + WLRR+ +  A   +R N+++  +    +   K+ AFA+ +   G+ GA     +   
Sbjct: 497 GVAWLRRSRLGAAMLAVRANERSAAAAGVDVARTKIVAFAIGAFIAGLGGALLGYQQTVA 556

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
             +MF     + + +   L G+T+LS    A  +  G + +           LL    S 
Sbjct: 557 DAEMFTAIGGLGLFATAYLAGITALSGGVVAGVMGAGGLLVV----------LLDRALSL 606

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
              ++ +M I L L ++     L+ 
Sbjct: 607 GEWYSVIMGIGLVLTVITNPEGLVG 631



 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 83/287 (28%), Gaps = 7/287 (2%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            ++   A  L +   S G+++          AY+Y  L     L     +P + ++    
Sbjct: 16  AVFGALAMALVLTYRSSGVVNFATGAIALYSAYTYAFLRKGEMLVPIPGLPKTIVLGPPL 75

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD-----RLYFLGT 161
           G++         G    +    +                    +         R+     
Sbjct: 76  GLVPAAAISVGLGAGFGVVLYGLVFRPLRSAPPVAKAVASIGVMLAIQAVLAARVGTAPV 135

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
           +VR ++       +         +    +  L+  + L  R T    A R   + +K   
Sbjct: 136 SVRPVLPNDAVDWAGTRIPGDRLWFAAVVVVLTVVLALVFRLTKFGLAARAAAETEKGAL 195

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
               +     ++ +A+SSA  G+AG   A     +          +  ++  ++G  T+L
Sbjct: 196 VSGLSPERIAVANWALSSAVAGLAGILIAPIVPLVPIS--YTLFIVPALAAALVGNFTAL 253

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
                A  ++  +      +   +                 ++ + +
Sbjct: 254 VPAVGAGLVIGMLQSELQFLQGKWTWLPQTGMTQLVPLAVIVVYLVV 300


>gi|187919043|ref|YP_001888074.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
 gi|187717481|gb|ACD18704.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
          Length = 646

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 71/336 (21%), Positives = 147/336 (43%), Gaps = 33/336 (9%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
             L    K L  LA +  L+L L   A  +  Y+  + ++ILI V+FA  L  ++G  G+
Sbjct: 313 TPLRPAGKRLKWLAAIALLVLVLAPLAANAFPYMPVLLVEILIAVLFATSLHFIMGPGGM 372

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
            S      + +GAY   +      L +   + +  +++ A  ++ G   ++  G YLA+ 
Sbjct: 373 HSFGHAAYFGLGAYGAALFLKVLNLPMEAALLLGPLLAVAGALVFGWFCVRLSGVYLAML 432

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL  ++I  +++ +W  +T G  GI                     +PS+++   +  YY
Sbjct: 433 TLAFAQIVWSVVFQWDDVTGGSNGI------------------LGLWPSNWLSSPVAFYY 474

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           V L    +   ++  +  + +  A R  RD+     ++   +   + +AF ++S F G+A
Sbjct: 475 VTLVCAVIGVWLLRKMLFSPLGYAMRASRDSVLRAEAIGIDVKRVQWAAFVIASLFCGLA 534

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G+ +A S+  ISP++   S ++  + +V+LGG+ +L+      A+   + +       Y+
Sbjct: 535 GSLYAFSKGTISPEVISVSRSVDGLVMVLLGGLQTLTGPIVGAAVFTWLQDTVARQTDYW 594

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                            L+  A+ L+++     ++ 
Sbjct: 595 ---------------QALLGFAILLLVIAFPQGIVG 615



 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 93/307 (30%), Gaps = 18/307 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95
           + +         + A GLS++ G   +++      Y  G   AYS            WL 
Sbjct: 9   LVNGLADASTLFLVAAGLSLIFGVTRIVNFAHGSFYMFGIYVAYSIASRFGHTTGGFWLS 68

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  +A++    G ++ +  L+       +  L+ +     I         G   ++    
Sbjct: 69  VLAAALVVAVLGALVEMVVLRRIYQAPELFHLLATFALVLIFRDAALWLWGPEDLFGPRA 128

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                     +   +++    +   +   L RT      R    
Sbjct: 129 P----------HLAGAVDFLGHPLPTYDIALIVIGPVVLLLLWYALTRTRWGTLVRAATQ 178

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++   +L     +     F V +   G+ GA                        +V++
Sbjct: 179 DREMLGALGINQAWLFTGVFFVGAFLAGLGGALQGPRMSA--NLSLDLETIGNAFVVVVV 236

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S+     A  I+  +  LC G+      ++     S +        + + +V+++R
Sbjct: 237 GGMGSIPGAFIAALIIAEIKALCIGIGH---VTIFGVGLSLSRFTLVAEFVVMAVVLVVR 293

Query: 336 SHSLLRL 342
              LL  
Sbjct: 294 PWGLLGR 300


>gi|89093716|ref|ZP_01166663.1| putative ureashort-chain amide or branched-chain amino acid uptake
           ABC transporter permease protein [Oceanospirillum sp.
           MED92]
 gi|89082112|gb|EAR61337.1| putative ureashort-chain amide or branched-chain amino acid uptake
           ABC transporter permease protein [Oceanospirillum sp.
           MED92]
          Length = 385

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 51/348 (14%), Positives = 98/348 (28%), Gaps = 33/348 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++         LL           Y  ++  + L Y M A  + ++ G  G+LSL     
Sbjct: 24  VILTALASLGNLLMPQDSIFYVSTYTITLLGKYLCYAMLALAVDVIWGYCGILSLGHGAF 83

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +A+G Y   +   R      +                 LP   +  D    A L++  I 
Sbjct: 84  FALGGYGMGMYLMRQIGDRGVYGNPELPDFMVFLNWTELPWFWYGFDQFWFAMLMVLLIP 143

Query: 134 QNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPS 174
             +   +  +                          +  +  +     +        F  
Sbjct: 144 GTLAFIFGWLAFRSRVTGVYLSIMTQALTYALLLAFFRNEMGFGGNNGLTDFKDILGFDL 203

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                 + ++     +  L+  I   + ++ +      IRD +     L       K+  
Sbjct: 204 QSDNTRVALFATTAFLLGLTFIISHKILKSRMGKVIVAIRDGESRARFLGYRTERYKVWL 263

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F  S+   G+AGA +      I+P  F    +I ++  V +GG  +L        ++   
Sbjct: 264 FVYSAMIAGIAGALYVPQVGIINPGEFSPLNSIEIVIWVAVGGRGTLIGAIVGALLVNYA 323

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                           KF           +     LV L     L+ L
Sbjct: 324 KT--------------KFTAIMPDGWLFALGAMFVLVTLFLPQGLVGL 357


>gi|319785082|ref|YP_004144558.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170970|gb|ADV14508.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 363

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 59/337 (17%), Positives = 124/337 (36%), Gaps = 9/337 (2%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              IL  + +   LL    +      +  +   I + + V+   GL I +G+ G+LS   
Sbjct: 29  RRTILTPVLLSLLLLAIALITVMTGSRPFNQTVIDVFVRVILVVGLYIFIGNSGVLSFGH 88

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           +    +GAY+   L     +         ++      ++             A+   + +
Sbjct: 89  IGFTCLGAYAAAWLTINPMMK------RGSLPGLPEWLLATRLPYWQSATLAALFAALAA 142

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            IF  +L++   I    A   +   +  + +   S+           I  +   Y++  +
Sbjct: 143 LIFGRVLMRLSGIAASIATFAMLAMINTIYSNWESVTGATSSVVGIPIVRVIWPYLIGAV 202

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +  +    + R+    A R  RD   A  +    I   +L AF +S A +G+ GA  A
Sbjct: 203 VAIFIAWAHAISRS--GLALRAARDEPTAAAASGIDIPRERLVAFVISGAVMGLGGALMA 260

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            S   ++PD F      I +S++++GGM SLS       +L  +++    +         
Sbjct: 261 HSIGVVTPDTFYLGLTFITLSMLVVGGMGSLSGGVVGVVLLSALIQALRWLEAGVSLGES 320

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
            F     +     + + + +++ +R   L+  R  + 
Sbjct: 321 TFALPKGV-QEIALGVIMIVILALRPSGLMGNREITL 356


>gi|307705245|ref|ZP_07642112.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus mitis SK597]
 gi|307621194|gb|EFO00264.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus mitis SK597]
          Length = 318

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 76/325 (23%), Positives = 137/325 (42%), Gaps = 42/325 (12%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L+ + +       +   +  QI I ++ A GL+++VG  G  SL      AIGAY+  I+
Sbjct: 21  LISVLVSVGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80

Query: 85  G--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           G  S    + +  + + A++SGA  +++G+P+L+ +GDYLA+ATL +SEI +  +I    
Sbjct: 81  GSKSPTYGAFFGAMIIGALLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +TNG AGI                                    +     ++    L   
Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+  A     + P  + 
Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  +I V+ IV+ GG+ S++    +  +L  +  L   +                     
Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVSAIVLGILNMLLQDV---------------ASVRMI 280

Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347
           +  +AL LV++ R   LL     S 
Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305


>gi|295675759|ref|YP_003604283.1| urea ABC transporter, permease protein UrtB [Burkholderia sp.
           CCGE1002]
 gi|295435602|gb|ADG14772.1| urea ABC transporter, permease protein UrtB [Burkholderia sp.
           CCGE1002]
          Length = 544

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 80/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +              +++     +        
Sbjct: 270 ITYGLIGVINMAHGEFLMIGAYATYVVQNLVQRFAPNAFDWYPLVAIPASFVAAALVGIV 329

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 330 LER--LVLKHLYGRPLETLLTTFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVLPNL 387

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     + A     L RT +    R +  N++    +          AFA 
Sbjct: 388 ILPYNRLAILAFSLIVVAIAWAVLTRTRLGLFVRAVTQNRRMAACVGVKTSRVDSYAFAF 447

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  L+        L  V + 
Sbjct: 448 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTVLGGFGLGLVSKA 505

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 506 IEPFWGAVLAK-------------IAVLVLIVLFIQKRPQGMFALKGRSAE 543


>gi|169831549|ref|YP_001717531.1| inner-membrane translocator [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638393|gb|ACA59899.1| inner-membrane translocator [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 334

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 64/338 (18%), Positives = 121/338 (35%), Gaps = 35/338 (10%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   +  +  V    ++ L + +     Y   +  Q +I  + A GLS++ G  G  S+ 
Sbjct: 8   KRLALYAVGTVAVYAVIKLLVVSGFINPYWQRVLDQAMIITIGALGLSVIFGISGQFSIG 67

Query: 70  CVIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
               Y IGAY+  ++         +    +   A ++     ++GLP L+   DYL IAT
Sbjct: 68  HAAFYGIGAYTAGLVTKSLGGDVAAFLAALVAGAFMAALVAFLIGLPVLRLTSDYLGIAT 127

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L    I +        +     G                            I ++  +  
Sbjct: 128 LGFGIICKVGFDNANKVIPAMGG----------------------ATGMTGIPQVANFDW 165

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +     LS  +     ++A   +   +R+++ A   +   I   K+ AF       G+AG
Sbjct: 166 IFLFFILSIILARNFVQSAQGRSCMALREDEVAANVIGINIFKFKMMAFVFGCGLAGLAG 225

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A +A     + P  F F  ++  + IV+LGGM SL+         + ++E    +     
Sbjct: 226 ALYAHRYPFLHPSNFDFLPSVDFLIIVVLGGMGSLTGTIVTAVGWVFLLEALRAV----- 280

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                   +F      +  + L + IL+R   +   + 
Sbjct: 281 -----LGMAFMDWRGVIYALILVVTILVRRQGIFGNKE 313


>gi|118470027|ref|YP_891080.1| inner-membrane translocator [Mycobacterium smegmatis str. MC2 155]
 gi|118171314|gb|ABK72210.1| inner-membrane translocator [Mycobacterium smegmatis str. MC2 155]
          Length = 324

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 65/323 (20%), Positives = 119/323 (36%), Gaps = 27/323 (8%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR---------Y 88
           ++  +     IY   A  L++V G  G+  L      A+ AY+Y+IL             
Sbjct: 7   FLVGVLTLAAIYAALAMVLNLVAGWAGMWDLGVAGLVAVAAYTYIILTQTRVDTGLVFTP 66

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           G  + + I  + +++     I+ LPS++ RG+Y  I TL  +E+   + I    +T G  
Sbjct: 67  GWPMAVGIVGAVLVTAVAAFIVALPSIRLRGEYFLITTLAFAEVIHQLTISESRLTRGTT 126

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G    DR +                +  V   I               +   L +T    
Sbjct: 127 GFSSIDRPFRDLVPASEYRWVLLALAVAVALVI-------------YLLTNRLAKTPYVR 173

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
             R  RDN+    SL   I+  +L  + ++ A IG+    +      + P +F      +
Sbjct: 174 LLRASRDNEAVARSLGKNIVRYRLITYVLAGALIGLITPLYLWHVRSVVPSLFVSELTFV 233

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           V + +++GG+ S        A+LI   E+   +      + +       +    L+++  
Sbjct: 234 VWTALVIGGIASRKGPVIGAALLIVCTEMLTFLQGSAEYAQMLAATRPVILGVLLVLVL- 292

Query: 329 FLVILMRSHSLLRLRTPSNFLER 351
                 R   L+  R+   F ER
Sbjct: 293 ----RFRPEGLMSERSAFQFSER 311


>gi|332285833|ref|YP_004417744.1| putative branched-chain amino acid transport system permease
           [Pusillimonas sp. T7-7]
 gi|330429786|gb|AEC21120.1| putative branched-chain amino acid transport system permease
           [Pusillimonas sp. T7-7]
          Length = 354

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 81/343 (23%), Positives = 142/343 (41%), Gaps = 23/343 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +R ++         +   +  F+ +    S  ++ ++ I  LI  + A GL+I+VG
Sbjct: 18  QIFPIRQDR------TFMLGVLIAAFVLVPLLASNYFLQAIFIPFLILSLAAIGLNILVG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSR-YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
             G +S+      A+GAY+    G R     + + I +  + +   G++ G+PSL+ RG 
Sbjct: 72  YCGQISIGSGAFMAVGAYAAWNFGVRIPATPLVIQILLGGVFATLVGVVFGVPSLRIRGL 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ TL          ++    TN  +   V+                       V   
Sbjct: 132 YLAVTTLAAQFFVDWAFLRIPYFTNYSSSGNVSVPAL-------------SAFGLPVQTP 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y  +L    + A +   L R AI   W  IRD   A   +    ++AKL+AFAVSS 
Sbjct: 179 VQRYLFVLVFVVVFAVLAKNLVRGAIGRQWMAIRDMDVAASVIGIRPVYAKLTAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            IG+AGA +A        P  F  + ++ ++ IVI+GG+ S+       A ++ +  L  
Sbjct: 239 IIGVAGALWAYIHLGSWEPLAFDLNRSLQLLFIVIIGGLGSIVGSFFGAAFMVLLPVLLT 298

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +   +   L       +     +    +   +++  H L RL
Sbjct: 299 NV--PHLFGLSISVDVASHIEHMVFGALIVFFLIVEPHGLARL 339


>gi|168484845|ref|ZP_02709790.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae CDC1873-00]
 gi|172042005|gb|EDT50051.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae CDC1873-00]
 gi|332203905|gb|EGJ17972.1| branched-chain amino acid transport system / permease component
           family protein [Streptococcus pneumoniae GA47368]
          Length = 318

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 76/325 (23%), Positives = 137/325 (42%), Gaps = 42/325 (12%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L+ + +       +   +  QI I ++ + GL+++VG  G  SL      AIGAY+  I+
Sbjct: 21  LISVLVSVGVLNLFYVQILQQIGINIILSVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80

Query: 85  GS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           GS      + +  + V A++SGA  +++G+P+L+ +GDYLA+ATL +SEI +  +I    
Sbjct: 81  GSKSPTYGAFFGAMLVGALLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +TNG AGI                                    +     ++    L   
Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+  A     + P  + 
Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  +I V+ IV+ GG+ S++    +  +L  +  L   +                     
Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVSAIVLGILNMLLQDV---------------ASVRMI 280

Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347
           +  +AL LV++ R   LL     S 
Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305


>gi|28379419|ref|NP_786311.1| branched-chain amino acid ABC transporter, permease protein
           [Lactobacillus plantarum WCFS1]
 gi|254557557|ref|YP_003063974.1| branched-chain amino acid ABC transporter, permease protein
           [Lactobacillus plantarum JDM1]
 gi|300768675|ref|ZP_07078572.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308181637|ref|YP_003925765.1| branched-chain amino acid ABC transporter, permease protein
           [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|28272258|emb|CAD65169.1| branched-chain amino acid ABC transporter, permease protein
           [Lactobacillus plantarum WCFS1]
 gi|254046484|gb|ACT63277.1| branched-chain amino acid ABC transporter, permease protein
           [Lactobacillus plantarum JDM1]
 gi|300493767|gb|EFK28938.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308047128|gb|ADN99671.1| branched-chain amino acid ABC transporter, permease protein
           [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 292

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 100/306 (32%), Gaps = 25/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GA+           +    +  
Sbjct: 8   LINGLSLGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFWGYYSLKSLHFNFVAALLS 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I    G+I+   + +       I  LI +     +L        G +          
Sbjct: 68  AMVICAVSGVIIEYFAYRPLRHSPRITALITAIGVSFLLENGMSYFVGASARS------- 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+   +    +        +L   C L   + L ++RT +  A R +  + +
Sbjct: 121 ----FPQAIKVVTYHWGGLRVSNVQLLILGTACLLMILLELIIKRTKMGKAMRAVSVDPE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG       + I P M   +  I      ++GG+
Sbjct: 177 AAQLVGINLNHTISFTFALGSAMAGAAGVLIGLYYNSIDPLM-GMTPGIKAFVAAVIGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   +    I+  +      +               +     ++   L +++L+    
Sbjct: 236 GSVPGASLGGFIIGILETGVQAIG-------------LSAYKDAVVYFVLIVILLVLPAG 282

Query: 339 LLRLRT 344
           +   RT
Sbjct: 283 IFGKRT 288


>gi|307706958|ref|ZP_07643757.1| high-affinity branched-chain amino acid transport system permease
           LivM [Streptococcus mitis SK321]
 gi|307617672|gb|EFN96840.1| high-affinity branched-chain amino acid transport system permease
           LivM [Streptococcus mitis SK321]
          Length = 318

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 77/325 (23%), Positives = 137/325 (42%), Gaps = 42/325 (12%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L+ + +       +   +  QI I ++ A GL+++VG  G  SL      AIGAY+  I+
Sbjct: 21  LISVLVSVGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80

Query: 85  G--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           G  S    + +  + + A++SGA  +++G+P+L+ +GDYLA+ATL +SEI +  +I    
Sbjct: 81  GSKSPTYGAFFGAMLIGALLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           ITNG AGI                                    +     ++    L   
Sbjct: 141 ITNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+  A     + P  + 
Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  +I V+ IV+ GG+ S++    +  +L  +  L   +                     
Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVSAIVLGILNMLLQDV---------------ASVRMI 280

Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347
           +  +AL LV++ R   LL     S 
Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305


>gi|307708904|ref|ZP_07645364.1| branched-chain amino acid transporter, permease protein livM
           [Streptococcus mitis SK564]
 gi|307620240|gb|EFN99356.1| branched-chain amino acid transporter, permease protein livM
           [Streptococcus mitis SK564]
          Length = 318

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 77/325 (23%), Positives = 137/325 (42%), Gaps = 42/325 (12%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L+ + +       +   +  QI I ++ A GL+++VG  G  SL      AIGAY+  I+
Sbjct: 21  LISVLVSIGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80

Query: 85  G--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           G  S    + +  + V A++SGA  +++G+P+L+ +GDYLA+ATL +SEI +  +I    
Sbjct: 81  GSKSPTYGAFFGAMIVGALLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +TNG AGI                                    +     ++    L   
Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+  A     + P  + 
Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  +I V+ IV+ GG+ S++    +  +L  +  L   +                     
Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVSAIVLGILNMLLQDV---------------ASVRMI 280

Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347
           +  +AL LV++ R   LL     S 
Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305


>gi|289168246|ref|YP_003446515.1| ABC transporter membrane-spanning permease-branched chain amino
           acid transport [Streptococcus mitis B6]
 gi|288907813|emb|CBJ22653.1| ABC transporter membrane-spanning permease-branched chain amino
           acid transport [Streptococcus mitis B6]
          Length = 318

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 75/325 (23%), Positives = 136/325 (41%), Gaps = 42/325 (12%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L+ + +       +   +  QI I ++ A GL+++VG  G  SL      AIGAY+  I+
Sbjct: 21  LISVLVSVGVLNLFYVQVLQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80

Query: 85  G--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           G  S    + +  + +  ++SGA  +++G+P+L+ +GDYLA+ATL +SEI +  +I    
Sbjct: 81  GSKSPTYGAFFGAMLIGVLLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +TNG AGI                                    +     ++    L   
Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+  A     + P  + 
Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  +I V+ IV+ GG+ S++    +  +L  +  L   +                     
Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVSAIVLGILNMLLQDV---------------ASVRMI 280

Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347
           +  +AL LV++ R   LL     S 
Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305


>gi|294055680|ref|YP_003549338.1| urea ABC transporter, permease protein UrtB [Coraliomargarita
           akajimensis DSM 45221]
 gi|293615013|gb|ADE55168.1| urea ABC transporter, permease protein UrtB [Coraliomargarita
           akajimensis DSM 45221]
          Length = 551

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 100/314 (31%), Gaps = 37/314 (11%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-----------SYVILGSRYGLSIW 93
              + ++ ++GL+I  G +G++++      AIG Y           ++ I    +G    
Sbjct: 262 TGSVLLIVSFGLAITFGLMGIINMAHGEFVAIGGYVTFMVQSFFINTWGIGSGAFGWYFI 321

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + +P+S +++   G+++    ++F       + L    +   +   ++ I          
Sbjct: 322 ISLPLSFIVAAGIGLVLEKSIIRFLYRRPLESLLCTWGLSMVMQQCFRLIFGAANVQVNN 381

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                   ++                     +++     +       LR+T +    R +
Sbjct: 382 PPWLMGNLSIGGFSM-----------SYTRLFIMFLALVVVIMTWFLLRKTNLGLHIRAV 430

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             N+    SL   +       FA+      + G+  A S+      +   +  +    +V
Sbjct: 431 MQNRSMASSLGIPVARVNSMTFALGCGLAALGGS--ALSQIGNVGPLMGQAYIVDSFMVV 488

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ++G + +L     +   +  V +L           +  F               + L + 
Sbjct: 489 VIGSVGNLLGAGLSAMGIGLVDQLLQPSLGPVMGKITVF-------------FVIILFLQ 535

Query: 334 MRSHSLLRLRTPSN 347
            R   L   R+ S 
Sbjct: 536 WRPGGLFPTRSRSL 549


>gi|269127374|ref|YP_003300744.1| inner-membrane translocator [Thermomonospora curvata DSM 43183]
 gi|268312332|gb|ACY98706.1| inner-membrane translocator [Thermomonospora curvata DSM 43183]
          Length = 364

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 70/336 (20%), Positives = 136/336 (40%), Gaps = 13/336 (3%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           LA +  +L  + +    ++ ++   G+  +   + A GL+++ GS G LSL      AIG
Sbjct: 14  LAGLAAVLAVMVILPFYAEPFLMQAGLFAMAAAIGAIGLNLLTGSTGQLSLGHAFFLAIG 73

Query: 78  AYSY---------VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           AY Y             S +GL   +   ++  ++G  G +    + + +G YL IA+L 
Sbjct: 74  AYGYVYFAAEPDSAHHLSGWGLPTPVAAVLAIALAGVAGGLFSPIAGRLKGTYLGIASLA 133

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +  I Q+IL     +T G  G  V     F      +            + +++   ++L
Sbjct: 134 LIFIGQHILHNAHAVTGGSNGREVPPLEIFGFVFADTPELVVLQVPFRALEKLWFLNLVL 193

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +    A I   + R     A  TIRD++ A   +   +   + + F +SS + G+AG  
Sbjct: 194 LVAA--AWIARGILRGRPGRAMNTIRDHEIAAGVMGVPVARYRGAVFVLSSMYAGLAGVL 251

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--YYF 306
            A +  R  PD F F  ++  ++++++GG+ +++       ++  +  L    +      
Sbjct: 252 LALAFQRTVPDYFGFILSLEYLAMIVIGGLGTVAGSIVGAVLVSMLPPLFTRYSDALPLI 311

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +              L    +  VIL     L+ L
Sbjct: 312 AASGSGGLDAAQASRILYGAVVIAVILFLPGGLMGL 347


>gi|72384077|ref|YP_293431.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72123420|gb|AAZ65574.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 339

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 117/297 (39%), Gaps = 15/297 (5%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
           ++ + +FA   ++++G  GLLS      +    Y        + ++  L + V  +    
Sbjct: 30  VVCFALFACAFNLLIGYGGLLSFGHAAMFGGAGYIAAHALKHWNITPELGLVVGTLAGAL 89

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
            G  MG+ +++ +G Y ++ TL ++++   ++++    T G+ G+    R          
Sbjct: 90  LGGAMGILAIRRQGIYFSMITLALAQMIYFVMLQAP-FTGGEDGLQGVPR---------- 138

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                 F    +  ++ +YYV+L +   +  ++  +  +        I++N+    SL  
Sbjct: 139 ---GKLFGILPLDNDLVLYYVVLTIAIAALLLLWRVVSSPFGAVLHAIKENESRAVSLGY 195

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
            +   KL AF +S+A  G+AG+         +     +S +  VI + ++GG+ +     
Sbjct: 196 NVERLKLVAFVISAAIAGLAGSLKVLVLGFETLSDVHWSMSGTVILMTLVGGLGTRWGPI 255

Query: 286 KATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
               I++ +      +     + + +          T +  I     +L   + +  
Sbjct: 256 LGALIIVALETKLGDIGHALASLTGIDAFLKLGESVTVVTGILFIATVLFFRNGIAG 312


>gi|227511440|ref|ZP_03941489.1| branched-chain amino acid ABC transporter, permease protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227085391|gb|EEI20703.1| branched-chain amino acid ABC transporter, permease protein
           [Lactobacillus buchneri ATCC 11577]
          Length = 319

 Score = 95.7 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 85/340 (25%), Positives = 153/340 (45%), Gaps = 43/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           KY+ I  ++ +    L+   +       +I++M + I I ++ A GL++++G  G  SL 
Sbjct: 6   KYNIIWLIIMISGFYLMNTLILIGVINAFIENMLVTISINIILATGLNLIIGFAGQFSLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+          +L I +  ++S    +I+G+P+L+ RGDYLAIAT+
Sbjct: 66  HAGFMAIGAYATAIITQTATTPAGFYLSIVIGIVVSILVALIVGIPTLRLRGDYLAIATM 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +EI + I+I    IT G AGI+   +L    T                         +
Sbjct: 126 GAAEIIR-IIINNMKITGGAAGIFNIPQLASWPT-------------------------V 159

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             M  ++  II+    +    A  ++R+++ A  ++   +   KL+AF + +A   +AG+
Sbjct: 160 YTMVCVTTIIIVNFIHSRGGRAVTSVREDEIAAEAMGINVFKWKLAAFTLGAATAAVAGS 219

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A+    ISP+ F   E+I ++ IV+LGG+ S++    A A+L  +  +          
Sbjct: 220 LHASFLQTISPNDFGIMESISILIIVVLGGVGSITGTFVAAAVLGVLDTVLQ-------- 271

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                   F      +   AL L+++ +   LL     S 
Sbjct: 272 -------DFGALRMVIYAAALILIMIFKPSGLLGTWELSI 304


>gi|331266744|ref|YP_004326374.1| ABC transporter membrane-spanning permease-high-affinity
           branched-chain amino acid transport [Streptococcus
           oralis Uo5]
 gi|326683416|emb|CBZ01034.1| ABC transporter membrane-spanning permease-high-affinity
           branched-chain amino acid transport [Streptococcus
           oralis Uo5]
          Length = 318

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 80/340 (23%), Positives = 143/340 (42%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + +   L +    L+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNILWLFLLLAGYGLISVLVSAGVLNLFHVQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  S    + +  + + A+ISGA  +++G+P+L+ +GDYLA+ATL
Sbjct: 66  HAGFMAIGAYAAAIIGSKSPTYGAFFGAMALGALISGAVALLVGIPTLRLKGDYLAVATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI +  +I    +TNG AGI                                    +
Sbjct: 126 GVSEIIRIFIINGGSLTNGAAGILGIPNFTNWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++    L   R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+
Sbjct: 161 YLFVVITTIATLNFLRSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F  +I V+ IV+ GG+ S++    +  +L  +  L   +      
Sbjct: 221 LQAGFIGSVVPKDYTFINSINVLIIVVFGGLGSITGTIVSAIVLGILNMLLQDV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  +AL LV++ R   LL     S 
Sbjct: 275 ---------ASVRMIIYALALVLVMIFRPGGLLGTWELSL 305


>gi|307945066|ref|ZP_07660402.1| inner-membrane translocator [Roseibium sp. TrichSKD4]
 gi|307770939|gb|EFO30164.1| inner-membrane translocator [Roseibium sp. TrichSKD4]
          Length = 400

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 127/358 (35%), Gaps = 31/358 (8%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           ++  L V  P LL  F   ++  ++      +  + LI+ +FA G +I+ G  G LS   
Sbjct: 14  LVVALVVFAPFLLNPFPDGSELAQFNAGYPDLMQRFLIFGIFAIGFNILFGLTGYLSFGH 73

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +G+Y+ V +     +++   I +S + +G   +++G  SL+  G Y +I TL  +
Sbjct: 74  AAFLGVGSYAGVWMMKLLTMNVVPAIIMSVIFAGLFSLLVGYISLRRSGIYFSILTLAFA 133

Query: 131 EIFQNILIK-WKPITNGKAG--------------IYVADRLYFLGTTVRSLIRFFRFPSS 175
           ++  ++      PITNG+ G                           +     +     +
Sbjct: 134 QMSFSLAYSVLTPITNGETGLQLNLDDPRVLGVSQVGGSIPAANFFGLAMRDSYELVLGN 193

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
           ++      YY+   +   +  + + + R+      R ++ NQ              L+AF
Sbjct: 194 WLFTFNAGYYLCAVVMIAAFYVSVRIFRSPFGMMLRAVKSNQNRMNFTGLNSRPYTLAAF 253

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            +S  + G+AG    A       +  +++ +  V+ + ILGG  +L         +    
Sbjct: 254 VISGMYAGLAGGLMVAMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLGAGFIKYCE 313

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLM-------------VIALFLVILMRSHSLL 340
            +   +N                     +              I   L+++     ++
Sbjct: 314 NIFSKINDNILYQWFSALPDAVADFLVFIIHPFIGKGWHLTLGIMFMLIVIFLPGGIM 371


>gi|295111506|emb|CBL28256.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           (TC 3.A.1.4.-) [Synergistetes bacterium SGP1]
          Length = 338

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 65/340 (19%), Positives = 122/340 (35%), Gaps = 52/340 (15%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L  ++ +L+ L         Y   + +   I +M    L++V G  G   +      +
Sbjct: 11  AALVFLFYVLVTLLRSMRVLNAYYIQVMMFAGINIMMTASLNLVNGFTGQFCIGHAGFMS 70

Query: 76  IGAYSYVILGSRYGL-----------SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           +GAY   ++ +                  L +     ++   G ++GLPSLK +GDYLAI
Sbjct: 71  LGAYGAAVVTTIVFHGKSIPAAAHVPVFLLSLLTGGCVAALVGALIGLPSLKLKGDYLAI 130

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL   EI + IL +      G  G+                                  
Sbjct: 131 VTLAFGEIVRAIL-RLIQPIGGARGMIGIP-------------------------NYSNL 164

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +L    ++  ++  L  +    A+  IRD++ A  ++       K+ +F +++   G+
Sbjct: 165 AWILFFVTVTLYLLRNLIYSPYGRAFLAIRDDEIAADAMGINTTRYKIISFCIAAFIAGV 224

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG  +A     I PD F F+++   +  +  GG  SL+       +L  + E+   +   
Sbjct: 225 AGGLYAHVLAFIQPDSFSFTKSSDFLVYLYAGGSGSLTGSVLGATLLTVLPEILRFLAD- 283

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                             +  + L +V+L RS  L   + 
Sbjct: 284 --------------WRLAVYAVILVVVMLYRSEGLCGGKE 309


>gi|146343566|ref|YP_001208614.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. ORS278]
 gi|146196372|emb|CAL80399.1| putative branched-chain amino acid ABC transporter, permease
           protein [Bradyrhizobium sp. ORS278]
          Length = 315

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 58/328 (17%), Positives = 127/328 (38%), Gaps = 29/328 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + VV  L+L           +I ++  +I+I  + A  L++++G  G++S       
Sbjct: 10  VVAIIVVAGLVLLPVYSNLTGNIFILTLFTRIVILALAAVSLNLIMGYGGMMSFGHAAYL 69

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IG Y+  IL      S W    V+  +S    +++G  SL+ RG Y  + TL  +++  
Sbjct: 70  GIGGYAVGILAQEGIASGWAQFAVAIAVSALYALVIGALSLRTRGVYFIMITLAFAQMAY 129

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +                          +    R        +   +  YY+ L      
Sbjct: 130 YVASGLARYGG--------------DDGLTVYKRSDFGGLINLGNRVQFYYLCLACLLAV 175

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             ++  +  +      + +R N++   ++       KL+ F ++    G++GA  A + D
Sbjct: 176 VVLVWRIVNSRFGLVLQGLRSNEQRMQAIGFPAKRYKLACFVIAGMLCGLSGALLANNTD 235

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            +SP +  ++ +  ++ +VILGGM +L      + + + + E+   +  Y+         
Sbjct: 236 FVSPAVMYWTRSGDLMVMVILGGMGTLMGPVVGSVVFLVLEEVLSQLTEYW--------- 286

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   +M   L L++L     ++ +
Sbjct: 287 ------ALIMGPLLLLIVLFGRGGIMGM 308


>gi|222479518|ref|YP_002565755.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239]
 gi|222452420|gb|ACM56685.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239]
          Length = 359

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 71/340 (20%), Positives = 134/340 (39%), Gaps = 24/340 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L LLA +  L      G         +M I  LI+   A   +I+ G  G  S      +
Sbjct: 30  LILLAAMPFLRQLALFGYAPLGWLSLNMLIITLIWATTAQAWNIMSGYTGQFSFGHAAFF 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEI 132
            +GAY+ +IL   +G+S W+ + + ++++G  G+++G  +      G Y A+ATL  +E+
Sbjct: 90  GLGAYATIILTGTFGISPWIGMLLGSVLAGIYGLLIGALTFRYDLEGHYFALATLAFAEL 149

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            + +      +              F     R         +     ++  YY++LG   
Sbjct: 150 LRYVFTNVPQLGGASG---------FFRPLAREYADGPGLAAFQFTGDLPYYYLILGFLT 200

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +   + L + R+ +      IR+ ++A  ++       KL A AVS+ F    GAF+A  
Sbjct: 201 VVTVVSLAINRSQLGYYLFAIREREQAAAAIGVPTYRYKLLAVAVSAFFTAWPGAFWAMY 260

Query: 253 RDRI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            + I    +F    NI ++   I+GG+ ++      + I+I V E               
Sbjct: 261 FNTIRPTTVFDLLVNIEILLPAIVGGIGTVLGPIVGSFIVIPVSEFVRQ----------- 309

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
              S    +  +  + L  ++L     ++   +    L R
Sbjct: 310 -SFSVPGLNNAVYGVILIAIVLYSPKGVVSWPSRFVELLR 348


>gi|328542353|ref|YP_004302462.1| branched-chain amino acid ABC transporter permease [polymorphum
           gilvum SL003B-26A1]
 gi|326412100|gb|ADZ69163.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Polymorphum gilvum SL003B-26A1]
          Length = 360

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 62/336 (18%), Positives = 122/336 (36%), Gaps = 9/336 (2%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              IL  + +   L+    L      +  +   I I + V+   GL + +G+ G++S   
Sbjct: 9   RRTILTPVLLSLILVGLALLAFFVESRPFNQTVIDIFLRVILVVGLYVFIGNSGVISFGH 68

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           +    +GAY+   L     +         ++      +I             A+   I +
Sbjct: 69  IGFTCLGAYAAAWLTIPPMMK------RMSLPGLPDWLIQIQLPYWGAAVLAALFAAIFA 122

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +F  +L++   I    A   +   +  + +   S+           I      Y++  +
Sbjct: 123 FLFGRVLMRLSGIAASIATFAMLAMINTIYSNWASVTGATSSVVGIPIVRSPWPYLIAAI 182

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 +      +    A R  RD   A  +    I   +L AF VS A +G+ GA FA
Sbjct: 183 AM--IFLAWLHAISRAGLALRAARDEPTAAAASGVDIPRERLIAFTVSGAIMGLGGALFA 240

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            S   ++PD F      I +S++++GGM SLS       +L  ++++   +         
Sbjct: 241 HSIGLVTPDTFYLGLTFITLSMLVVGGMGSLSGAVLGVVLLSILIQVLRWLEQGVSVGSS 300

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
            F     M     + I + ++++ R   ++  R  S
Sbjct: 301 TFALPNGM-QEIALGIVMIVILMFRPAGIMGNRELS 335


>gi|322374645|ref|ZP_08049159.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus sp. C300]
 gi|321280145|gb|EFX57184.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus sp. C300]
          Length = 318

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 80/340 (23%), Positives = 143/340 (42%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + +   L +    L+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNILWLFLLLAGYGLISVLVSAGVLNLFHVQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  S    + +  + + A+ISGA  +++G+P+L+ +GDYLA+ATL
Sbjct: 66  HAGFMAIGAYAAAIIGSKSPTYGAFFGAMVLGALISGAVALLVGIPTLRLKGDYLAVATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI +  +I    +TNG AGI                                    +
Sbjct: 126 GVSEIIRIFIINGGSLTNGAAGILGIPNFTNWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++    L   R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+
Sbjct: 161 YLFVVITTIATLNFLRSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F  +I V+ IV+ GG+ S++    +  +L  +  L   +      
Sbjct: 221 LQAGFIGSVVPKDYTFINSINVLIIVVFGGLGSITGTIVSAIVLGILNMLLQDV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  +AL LV++ R   LL     S 
Sbjct: 275 ---------ASVRMIIYALALVLVMIFRPGGLLGTWELSL 305


>gi|121607291|ref|YP_995098.1| ABC transporter-like protein [Verminephrobacter eiseniae EF01-2]
 gi|121551931|gb|ABM56080.1| ABC transporter related [Verminephrobacter eiseniae EF01-2]
          Length = 612

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 70/324 (21%), Positives = 138/324 (42%), Gaps = 30/324 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           LAV    L+     +     Y   +   + +++M A G++++VG  G  SL     +A G
Sbjct: 29  LAVTGIALVAAAAASMAGNDYHLRVLFMVTVHLMCALGMNVLVGYAGQKSLGQAGLFAAG 88

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  +L +R+G S WL +  + +++G CG ++ L SL+ +G YLA+ TL    + + ++
Sbjct: 89  AYTAALLTARHGWSPWLALLAAGVVAGLCGALIALASLRAKGPYLAMVTLAFGTMIEKLV 148

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +W  +  G AGI+    L F G  +  L                  +  + +C L+  +
Sbjct: 149 SEWDELFGGAAGIFGIGPLAFGGRPLTHLQW---------------VWFGIALCALTHLL 193

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L +  I  A  +++ ++ A  S+   +  +K+ AF +++   G+AGA  A     I+
Sbjct: 194 LHNLLQGRIGRALLSLQADEIAAGSVGIGVYRSKVLAFVIAAVTCGIAGAMVAQQNQYIN 253

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            D   F+ +I ++ +V+ GG  S                L   +       +  F   + 
Sbjct: 254 SDFISFNLSIFILLLVLFGGAGS---------------TLGPLLGALLLTLVDAFLAQWP 298

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                +    L   + +    +  
Sbjct: 299 SAQHFVYGALLLFALYLMPQGMAG 322


>gi|168486756|ref|ZP_02711264.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae CDC1087-00]
 gi|168490838|ref|ZP_02714981.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae CDC0288-04]
 gi|168492900|ref|ZP_02717043.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae CDC3059-06]
 gi|225854259|ref|YP_002735771.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae JJA]
 gi|225858561|ref|YP_002740071.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae 70585]
 gi|183570277|gb|EDT90805.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae CDC1087-00]
 gi|183574710|gb|EDT95238.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae CDC0288-04]
 gi|183576913|gb|EDT97441.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae CDC3059-06]
 gi|225720757|gb|ACO16611.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae 70585]
 gi|225723209|gb|ACO19062.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae JJA]
 gi|301793910|emb|CBW36306.1| branched-chain amino acid transport system permease protein
           [Streptococcus pneumoniae INV104]
 gi|332204760|gb|EGJ18825.1| branched-chain amino acid transport system / permease component
           family protein [Streptococcus pneumoniae GA47901]
          Length = 318

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 77/325 (23%), Positives = 137/325 (42%), Gaps = 42/325 (12%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L+ + +       +   +  QI I ++ A GL+++VG  G  SL      AIGAY+  I+
Sbjct: 21  LISVLVSVGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80

Query: 85  GSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           GS+       +  + V A++SGA  +++G+P+L+ +GDYLA+ATL +SEI +  +I    
Sbjct: 81  GSKLPTYGAFFGAMLVGALLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +TNG AGI                                    +     ++    L   
Sbjct: 141 LTNGAAGILGIPNFTTWQM-------------------------VYFFVVITTIATLNFL 175

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+  A     + P  + 
Sbjct: 176 RSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGSLQAGFIGSVVPKDYT 235

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  +I V+ IV+ GG+ S++    +  +L  +  L   +                     
Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVSAIVLGILNMLLQDV---------------ASVRMI 280

Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347
           +  +AL LV++ R   LL     S 
Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305


>gi|288905951|ref|YP_003431173.1| amino acid ABC transporter permease [Streptococcus gallolyticus
           UCN34]
 gi|306831970|ref|ZP_07465125.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|325978917|ref|YP_004288633.1| branched-chain amino acid transport system permease [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|288732677|emb|CBI14249.1| putative amino acid ABC transporter permease protein [Streptococcus
           gallolyticus UCN34]
 gi|304425896|gb|EFM29013.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|325178845|emb|CBZ48889.1| branched-chain amino acid transport system permease protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 317

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 69/340 (20%), Positives = 135/340 (39%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     L VV   +L           Y   + + I I ++   G ++V+G  G  +L 
Sbjct: 6   KINLSWLALIVVLFGILEFLATTNILNLYYIQILMGIGISILMGLGTNLVLGFSGQFTLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+  +       +  + V  +I+    ++ G+P+L+ +GDYLAIATL
Sbjct: 66  QAGFMAIGAYATAIITQQNPTYGGFYFSMLVGIVIAVLVALVFGIPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            M+EI + +++    +TNG AG+                                   V+
Sbjct: 126 GMAEIIRIVIVNGGDLTNGAAGLTGILPYTTWP-------------------------VI 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                    +IL   R++I     ++R+++ A  ++   +   K+  F + +    +AG+
Sbjct: 161 FIFVVAITILILNFLRSSIGRQVISVREDEIAAEAMGVNVTRMKVLIFVMGAIISAIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +      + P  F   ++I  + I +LGG+ S++    A  +L  +      +      
Sbjct: 221 LYVGYIGTVVPKDFTIMKSIDYLIIAVLGGLGSITGTILAAIVLGILNMFLQNV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                    +     +  +AL LV++ R   LL  +  + 
Sbjct: 275 ---------SNLRMIIYSLALILVMIFRPGGLLGTKEFTL 305


>gi|167629191|ref|YP_001679690.1| branched-chain amino acid abc transporter, permease protein
           [Heliobacterium modesticaldum Ice1]
 gi|167591931|gb|ABZ83679.1| branched-chain amino acid abc transporter, permease protein
           [Heliobacterium modesticaldum Ice1]
          Length = 318

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 63/301 (20%), Positives = 125/301 (41%), Gaps = 43/301 (14%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           S+ I   + ++ A  L I + S G +SL      AIGAY   ++   +G+ +++ +  +A
Sbjct: 4   SVLIFAGVNIILAVSLYITL-STGQISLGHGAFMAIGAYVASVMTVNFGVHLYIAMMGAA 62

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           + SG  G+ +G P+L+ +G YLAI TL + E+ +    K++                   
Sbjct: 63  IASGLVGIAVGFPALRVKGIYLAIGTLGLCEVVEVFFHKFEY------------------ 104

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                        S F         ++  +  L       L R+ +  A++ +++++ A 
Sbjct: 105 ---------TGAASGFSGMSGTTVPLVWAVAALCILFCWQLSRSRMGWAFKAVKEDEVAA 155

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++   I + K+SAF +S+A  G+ GA +A     I P  F +  +++++  VI GG  +
Sbjct: 156 QTMGLNITYLKVSAFGMSAAMAGLGGALYAHYIFFIDPAAFGYHTSLLILFYVIFGGAET 215

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
               A    IL  +     G+                    T+  + +  ++ +R   L+
Sbjct: 216 FWGAALGALILTVLPTFIRGLEE---------------WRFTVYGLLIMAMMAIRPQGLI 260

Query: 341 R 341
            
Sbjct: 261 S 261


>gi|296156968|ref|ZP_06839805.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295892854|gb|EFG72635.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 646

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 70/336 (20%), Positives = 147/336 (43%), Gaps = 33/336 (9%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
             L    K L  LA +  L+L L   A  +  Y+  + ++ILI V+FA  L  ++G  G+
Sbjct: 313 TPLRPAGKRLKWLAAIALLVLVLAPLAANAFPYMPVLLVEILIAVLFATSLHFIMGPGGM 372

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
            S      + +GAY   +      L +   + +  +++ A  ++ G   ++  G YLA+ 
Sbjct: 373 HSFGHAAYFGLGAYGAALFLKVLNLPMEAALLLGPLLAVAGALVFGWFCVRLSGVYLAML 432

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL  ++I  +++ +W  +T G  GI                     +PS+++   +  YY
Sbjct: 433 TLAFAQIVWSVVFQWDDVTGGSNGI------------------LGLWPSNWLSSPVAFYY 474

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + L    +   ++  +  + +  A R  RD+     ++   +   + +AF ++S F G+A
Sbjct: 475 LTLACAVVGVWLLRKMLFSPLGYAMRASRDSVLRAEAIGIDVKRVQWAAFVIASLFCGLA 534

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G+ +A S+  ISP++   S ++  + +V+LGG+ +L+      A+   + +       Y+
Sbjct: 535 GSLYAFSKGTISPEVISVSRSVDGLVMVLLGGLQTLTGPIVGAAVFTWLQDTVARQTDYW 594

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                            L+  A+ L+++     ++ 
Sbjct: 595 ---------------QALLGFAILLLVIAFPQGIVG 615



 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 93/307 (30%), Gaps = 18/307 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95
           + +         + A GLS++ G   +++      Y  G   AYS            WL 
Sbjct: 9   LVNGLADASTLFLVAAGLSLIFGVTRIVNFAHGSFYMFGIYVAYSMASRFGHTAGGFWLS 68

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  +A++    G ++ +  L+       +  L+ +     I         G   ++    
Sbjct: 69  VLAAALVVAVLGALVEMIVLRRIYQAPELFHLLATFALVLIFRDAALWLWGPEDLFGPRA 128

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                     +   +++    +   +   L RT      R    
Sbjct: 129 P----------HLAGAVDFLGHPLPTYDIALIVIGPVVLLLLWYALTRTRWGTLVRAATQ 178

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++   +L     +     F V +   G+ GA                        +V++
Sbjct: 179 DREMLGALGINQAWLFTGVFFVGAFLAGLGGALQGPRMSA--NLSLDLETIGNAFVVVVV 236

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S+     A  I+  +  LC G+      ++     S +        + + +V+++R
Sbjct: 237 GGMGSIPGAFIAALIIAEIKALCIGIGH---VTIFGVGLSLSRFTLVAEFVVMAVVLVVR 293

Query: 336 SHSLLRL 342
              LL  
Sbjct: 294 PWGLLGR 300


>gi|218886265|ref|YP_002435586.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218757219|gb|ACL08118.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 358

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 69/343 (20%), Positives = 134/343 (39%), Gaps = 38/343 (11%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG-- 89
                +Y  ++ + + I ++FA  L+IV G +G  S        +GAY+  +L       
Sbjct: 23  FNVIDQYTQTVLMFMGINIIFASSLNIVNGYMGEFSCGHAGFMCVGAYASSVLSVVLFTS 82

Query: 90  ---------------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
                          +   +++ V+ ++S   G+++ LPS + RGDYLAI T+  + I  
Sbjct: 83  NKLVGDALLPPELAPMLFPVVLIVAGLVSSVFGLLVALPSFRTRGDYLAIITIAANYIVI 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           +++     I  G  G +   R+                    ++   +M+  ++     S
Sbjct: 143 SVIENL-DIIGGPRGFHGMKRVINGMRD--------------LVDIPWMFIWVILGTLFS 187

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I+  L  +        +  ++ A   ++      KL AF VSS   G+AGA +A    
Sbjct: 188 VWILRRLVNSTYGKGISAVCQDEVAAEIMSVDTNHVKLVAFMVSSGLAGVAGALYAHVYG 247

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F   ++   + +V LGGM SLS    A  +   ++E    +      +L   + 
Sbjct: 248 YVNPQAFNILKSTEGLVMVYLGGMASLSGSVMAAILFTLLLESLRFVIPGLDAALHAVNL 307

Query: 315 SFN------MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                    +    L+ + L L++  R   ++  R  S    +
Sbjct: 308 LPAGYELSQVWKWVLIPLILILLMQFRPEGIMGNRELSGVFPK 350


>gi|149202460|ref|ZP_01879432.1| inner-membrane translocator [Roseovarius sp. TM1035]
 gi|149143742|gb|EDM31776.1| inner-membrane translocator [Roseovarius sp. TM1035]
          Length = 328

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 51/328 (15%), Positives = 115/328 (35%), Gaps = 22/328 (6%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            +I+    +       L             + + ++I ++      ++    G  SL  V
Sbjct: 1   MRIVLKPVMFLLGAAALIALPHGLSFSQQEILVFLVINILLVMSYRLLT-LTGEWSLGHV 59

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           +   +GAY+  ++    G+ + + + +  + +    +++  P  + +G Y  I +    E
Sbjct: 60  VIMGVGAYASALMTKNLGVPVPVGMILGGVTAALLAVLLSFPLFRMKGFYFLIGSFAAGE 119

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I + I  +++    G  GI   D +        S   F           +  YY    + 
Sbjct: 120 IIRLIWKRFREPFGGARGISGIDPMPDFSLGFYSFDFFE---------PVSYYYFAGTIV 170

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +   ++  + ++ +   +  +    K   +    +   +  AFA++S F G+AGA  A 
Sbjct: 171 AVCLWVLWRIEKSPVGLTFHAVHWQDKLAQASGVNLRAYRTLAFAIASGFAGIAGALQAH 230

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               ++P+ F     + V++  I+GG T+         +L  + E+              
Sbjct: 231 YVGTVNPNSFDIEVMVFVLTWAIVGGTTTFYGPILGCVLLTVINEVVLR----------- 279

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSL 339
               F           + L IL   + L
Sbjct: 280 -GMGFEQARPLFYGAIMILSILFLPNGL 306


>gi|86751758|ref|YP_488254.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86574786|gb|ABD09343.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 343

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 59/335 (17%), Positives = 131/335 (39%), Gaps = 33/335 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+    L+           Y      + LI  + A  L++VVG  GL+SL     + +  
Sbjct: 13  ALPAICLIAALALPFVVPVYYVQFASKALILGVLAMALNLVVGQGGLVSLCHAAFFGLAG 72

Query: 79  YSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           Y   ++  +Y   S+ L  P + + +    +++G  +L+ RG Y  + TL   E+   + 
Sbjct: 73  YVLALMSPKYDAASLLLTWPAAVLAASFAALVIGALALRTRGVYFIMVTLAFGEMLFYLF 132

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                                        +         +   +  Y+++LG+   + ++
Sbjct: 133 HDADFAGGSDGAFINVKP----------ELVIAGVRLLDLDKPLTFYFLVLGVTVAAIAL 182

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           ++ + R+   +A    RDN++   +L   I   +L AF +S A  G+AG   A     ++
Sbjct: 183 LVTVVRSPFGHALAAARDNERRARALGFPIFRIRLIAFVLSGALSGVAGYLAAVQFGFVA 242

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P M  + ++  V+ +V++GG+ +++       +L+G+ E+      ++            
Sbjct: 243 PQMLGWHQSATVLVMVLIGGLGTVTGPLIGALVLLGLEEVLKASFEHW------------ 290

Query: 318 MRHTTLMVIALFLVILMRSHS-------LLRLRTP 345
                +  + +  ++L+  +        L+  R P
Sbjct: 291 ---KLIEGVIVIAIVLLLPNGVRQLWPMLVGDREP 322


>gi|22298665|ref|NP_681912.1| ABC transporter permease protein [Thermosynechococcus elongatus
           BP-1]
 gi|22294845|dbj|BAC08674.1| ABC transporter permease protein [Thermosynechococcus elongatus
           BP-1]
          Length = 389

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 107/357 (29%), Gaps = 31/357 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           +S FS   ++      ++     L+L   + +     +   +  + L   + A G+ ++ 
Sbjct: 4   LSQFSFPKDRLSGRELMVVAALALILIFVMPSLL-PGFRLDLLHRYLALAIVALGIDLIW 62

Query: 61  GSLGLLSLNCVIAYAIGAYSYVIL----------------GSRYGLSIWLLIPVSAMISG 104
           G  GLLSL   I +A+G Y+  +                  S YG++             
Sbjct: 63  GFTGLLSLGHGIFFALGGYAIAMHLKLQVPATASSSLPDFMSLYGVTELPWFWYPFYSFT 122

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
                + L           +            ++    I           +L+     + 
Sbjct: 123 FAVAAVVLIPALLGALLGYLVFRNRIRGVYFSILTQAAIIVFYNFFNGQQKLFNGTNGLT 182

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
                  FP      + + Y + +    L+  +  WL           IRD++       
Sbjct: 183 DFQTLLGFPVRNAQTQYWFYVLTVIFLALAYLLCRWLTMGRFGRLLVAIRDDEARVRFSG 242

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                 K+  FA+S+A  G+ GAFF      ISP     + +I ++  V +GG  SL   
Sbjct: 243 YNPTSYKVLVFAISAALAGIGGAFFTLRTGIISPRAMDIAFSIEMVIWVAVGGRASLIGA 302

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                ++     L                  F             +V+L     ++ 
Sbjct: 303 VLGALLVNFARSLLSE--------------QFADIWLFFQGALFLIVVLALPTGIVG 345


>gi|83943122|ref|ZP_00955582.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
 gi|83846130|gb|EAP84007.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
          Length = 402

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 63/349 (18%), Positives = 129/349 (36%), Gaps = 25/349 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           + A +         G  +       +  + +I+ +FA G +I+ G  G LS        +
Sbjct: 20  MAAPIILNPFPAGSGLAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYLSFGHAAFLGV 79

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G+YS V +     +++   I +S +++G   +++G  SL+  G Y +I TL  +++  N+
Sbjct: 80  GSYSAVWMMKLLSMNVIPAILLSVIVAGLFSVVIGFVSLRRSGIYFSILTLAFAQMSFNL 139

Query: 137 LIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP-----------SSFVIYEIFMY 184
                 PITNG+ G+ +A     +     +      F             ++       Y
Sbjct: 140 AYSVLTPITNGETGLQIALSDPRILDGANAPSYPNLFGAQMNAATTLDFGAWSFTFSVGY 199

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y+   +  L+  I + + R+      R ++ NQ+             L+AF +S  + G+
Sbjct: 200 YLCAVIMLLAFYISIRVFRSPFGMMLRAVKSNQQRMNYTGLNTKPYTLAAFVISGMYAGL 259

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG   AA       +  +++ +  V+ + ILGG  +L         +     +   +N  
Sbjct: 260 AGGLLAAMDPLAGAERMQWTASGEVVLMTILGGAGTLLGPVLGAGFIKYFENIFSKINDN 319

Query: 305 YFNSLLKFDCS-------------FNMRHTTLMVIALFLVILMRSHSLL 340
             +    F                        + +   LV++     L+
Sbjct: 320 VLHGWFAFMPDGLEDTLITLIHPFVGKGWHLTLGLLFMLVVIFLPGGLV 368


>gi|307298793|ref|ZP_07578595.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915218|gb|EFN45603.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 342

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 54/335 (16%), Positives = 115/335 (34%), Gaps = 9/335 (2%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  L  +  + L LFL       Y   +   I IY + A  L++V G  G+ SL     
Sbjct: 1   MILTLIALPSIALLLFLSQELLNSYYSRIITLIGIYGIMAVSLTLVNGISGVFSLGHAGF 60

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            A+GAY+  +L           +    +       I            L  A       +
Sbjct: 61  IAVGAYTSALLTLSPEQKEMTFLIEKLV--WPLNSIQIPFFWATIIAGLVAAVFAFLIGW 118

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
            ++ +          G     R++ L     +            + +    +   G   +
Sbjct: 119 PSLRLTGDYFAIATLGFSEIIRIFALNLNSITN----GALGLKALPDHTNVWWAWGWLLV 174

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           + + +L L  ++   A R IR+++ A  ++   +   +L+AF +   F G++G+ +    
Sbjct: 175 TVATVLSLAYSSFGRALRAIREDRVAAQAMGINVFKHQLTAFVLGGFFAGISGSLYGHWL 234

Query: 254 DRISP--DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
             I P  + F       V+ +++LGG+ S++      A+   + E    +         K
Sbjct: 235 STIDPRTNTFGILLTFNVLIMIVLGGLGSITGAIIGGALFAFLSEWLRFLEGPMNILGFK 294

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                +     +      ++++     L+     S
Sbjct: 295 I-MGISGMRMLVFSGLFVIIMIFWPRGLMGRSEFS 328


>gi|313679773|ref|YP_004057512.1| inner-membrane translocator [Oceanithermus profundus DSM 14977]
 gi|313152488|gb|ADR36339.1| inner-membrane translocator [Oceanithermus profundus DSM 14977]
          Length = 449

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 57/330 (17%), Positives = 111/330 (33%), Gaps = 17/330 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
            + +L L  V   +L    L   +    + S    I I+ + A  L+++ G LG+LSL  
Sbjct: 2   RNTLLTLATVGLAILGLYLLTQAEGSSGLLSALTLIFIWGIAAVSLNLINGQLGILSLGH 61

Query: 71  VIAYAIGAYSYVILGSRYGLSIWL----------------LIPVSAMISGACGMIMGLPS 114
                IG Y   +L                               A +      I     
Sbjct: 62  HGFMLIGGYVTALLMLPEKERAPFRTRLLSDWARNHLDLDKWLRGAGLDFIANSIDLKFV 121

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
           +      LA A + +     ++ +K   +     G     RL      V +L        
Sbjct: 122 VALFLAGLAAAVVGVIVGAPSLRLKGDYLAIVTFGFGEIIRLLPNAPEVAALTNGP-LGI 180

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
             +  +    +            +  L+ ++   A+  IR+++ A  ++   + + K+ A
Sbjct: 181 KGIPGDAGTVWWTFFAFLFVLWFLSRLKFSSYGRAFEGIREDEIAAEAMGVNLAYHKVLA 240

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F +S+ F G+AG  +A+    +    F F     ++  + LGG+ S++     TAI++ V
Sbjct: 241 FTISAFFAGVAGGLYASYLQSVDTQTFNFFVTFFLLVAISLGGLGSITGAVLGTAIVVLV 300

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
                 +   Y   +     +  M      
Sbjct: 301 RIYGGFLEQPYPAYVGYLGGAVVMLSAFAF 330


>gi|33601270|ref|NP_888830.1| high-affinity branched-chain amino acid transport system permease
           protein [Bordetella bronchiseptica RB50]
 gi|33575705|emb|CAE32783.1| high-affinity branched-chain amino acid transport system permease
           protein [Bordetella bronchiseptica RB50]
          Length = 345

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 69/322 (21%), Positives = 126/322 (39%), Gaps = 17/322 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  LL  L L    +  Y   +   + I+V  A GL+I+ G  GL+SL       +GA
Sbjct: 24  VWLALLLAALALFPFLANAYWLYLACLVAIHVASATGLNILTGYTGLVSLGQAAFMGLGA 83

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L    G    L +  +  ++   G+++G+PSL+ +G YLAI T+  S I   +  
Sbjct: 84  YTVAVLEVHVGTPALLNLLAAGAVAMLGGLVVGVPSLRVKGLYLAIVTIAASFIAHFLFA 143

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                           RL  +                 +     +Y++++ +  L     
Sbjct: 144 NLPLTGGTAGLQVPPARLLGMD----------------LDTSFKIYWLIVPITVLMVLGA 187

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L RT I  A+  IRD   +   L   ++  KL +F +SS + G+AG  +A     ++P
Sbjct: 188 ANLFRTRIGRAFIAIRDRDISAEVLGIDLLRYKLLSFGLSSFYAGVAGGLWAYFFRVVTP 247

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F    +I  ++ +I+GGM S+         +  V E    +   +           + 
Sbjct: 248 ESFPLVMSIFFLAAIIVGGMGSILGAILGAVFMTMVPEFLK-LVVGWLPVGGDALGLLSP 306

Query: 319 RHTTLMVIALFLVILMRSHSLL 340
             T +    +   ++     L 
Sbjct: 307 VRTIVFGALIVGFLIFEPLGLA 328


>gi|319939593|ref|ZP_08013952.1| branched-chain amino acid permease [Streptococcus anginosus
           1_2_62CV]
 gi|319811182|gb|EFW07488.1| branched-chain amino acid permease [Streptococcus anginosus
           1_2_62CV]
          Length = 316

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 81/340 (23%), Positives = 146/340 (42%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + +  +L +    L+ L + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNILWFVLLLAGYGLIALLVSAGVLNDFYLQILQQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  +    + +  + + A+I+GA  +I+G+P+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYAAAIIGSRTATYPAFFAAMVLGALIAGAVALIVGIPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI + ++I    +TNG AGI                                    +
Sbjct: 126 GVSEIIRILIINGGDLTNGAAGILGIPAFTNWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++  + +   R+ I  A  ++R+++ A  S+       K+ AF   +    +AG+
Sbjct: 161 YFFVVITTILTINFLRSPIGRATLSVREDEIAAESVGVNTTKIKVIAFVFGAMTASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F  +I V+ IV+ GG+ S++    A  +L  +  +   +      
Sbjct: 221 LQAGFIGSVVPKDYTFINSINVLIIVVFGGLGSMTGTIVAAIVLGILNMVLQNV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  +AL LV++ R   LL     S 
Sbjct: 275 ---------ASIRMIIYSLALILVMIFRPGGLLGTWELSL 305


>gi|168335480|ref|ZP_02693566.1| Branched-chain amino acid transport system permease protein livM
           [Epulopiscium sp. 'N.t. morphotype B']
          Length = 337

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 77/331 (23%), Positives = 136/331 (41%), Gaps = 45/331 (13%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           ++ +      +       +L + +       YI  + + ILI V+    L++V G LG L
Sbjct: 21  KITQRLIYATIAIFAIYFVLIIGMATGLIDNYISGIIVSILINVIMGVSLALVTGYLGEL 80

Query: 67  SLNCVIAYAIGAYSYVILGSRYG----LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            L      A+GAY+  I+  +      +   + +    +++ A G+I+G+P+L+ RGDYL
Sbjct: 81  VLGHAGFMAVGAYTAAIITMQLNLPAVIEFPIALLAGGILASAIGIIIGIPALRLRGDYL 140

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
            I TL   EI + I++    ITNG  G+                                
Sbjct: 141 GIITLGFGEIIR-IILNNXEITNGARGLSGIPHYSNFT---------------------- 177

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
              V   +  +   I+  +  +    A   IRDN+ A   +  +  F K  AF++++ F 
Sbjct: 178 ---VAFFITAIVIVILYKIITSRTGRAIVAIRDNEIATDCVGISTFFYKTLAFSIAAFFA 234

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+AG  +A     ++P  F F ++I V+ IV+LGGM +L     A  IL  + EL     
Sbjct: 235 GIAGGLYAHYHTVLNPVSFGFMQSIEVLIIVVLGGMGNLFGTIIAAIILGVLNELLRSFT 294

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
            Y                  +  + L ++++
Sbjct: 295 EY---------------RMIIYSLVLIIMMI 310


>gi|55377506|ref|YP_135356.1| branched-chain amino acid ABC transporter permease [Haloarcula
           marismortui ATCC 43049]
 gi|55230231|gb|AAV45650.1| branched-chain amino acid ABC transporter permease protein
           [Haloarcula marismortui ATCC 43049]
          Length = 382

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 52/337 (15%), Positives = 118/337 (35%), Gaps = 25/337 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           + + + + +  +L VV+  ++     A+ S     S+  Q L++   A GL++++    L
Sbjct: 18  VEVTRREAVFLVLGVVFLFVIPDI--ASLSDSLQLSVIHQGLLFGFAAVGLNLLLRHTKL 75

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
            S      +  GAY+  +L    G+    L+ + A+ +      +               
Sbjct: 76  TSFGHAAFFGTGAYATAVLARYAGVQSVGLLLLGAIAAATVMAAIIGVLSLRHTGLYFAL 135

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
             +        +   +    G  G+ V                      S  +Y+I  YY
Sbjct: 136 LTLAFGQLLYAIALGQSALGGSDGLPVRPGPANQPLLF-------GTAFSPDVYQILTYY 188

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + + +  +   ++  + ++   NA   I   +     +   +     +AF +S  + G+A
Sbjct: 189 LTVVVILIGLFVMYRITQSPFRNALDAIGQERTRARFIGLPVRRYVWAAFVISGIYGGVA 248

Query: 246 GAFFAASRDRISPDMFKFSEN-IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           G  FA  R  + P+   F      ++ + ILGG  +L        +L+ + ++   +  Y
Sbjct: 249 GGLFAVVRQYVRPEGTLFFLRSGDILFMAILGGFRTLVGPLIGGVVLVFLQDVGQDVTQY 308

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           Y                 L  + L +++      ++ 
Sbjct: 309 YE---------------FLTGVVLLILVYGFPRGIVG 330


>gi|293365061|ref|ZP_06611778.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus oralis ATCC
           35037]
 gi|307702229|ref|ZP_07639189.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus oralis ATCC 35037]
 gi|291316511|gb|EFE56947.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus oralis ATCC
           35037]
 gi|307624242|gb|EFO03219.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus oralis ATCC 35037]
          Length = 318

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 80/340 (23%), Positives = 142/340 (41%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + +   L +    L+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNILWLFLLLAGYGLISVLVSAGVLNLFHVQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  S    + +  + + A+ISGA  + +G+P+L+ +GDYLA+ATL
Sbjct: 66  HAGFMAIGAYAAAIIGSKSPTYGAFFGAMVLGALISGAVALFVGIPTLRLKGDYLAVATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI +  +I    +TNG AGI                                    +
Sbjct: 126 GVSEIIRIFIINGGSLTNGAAGILGIPNFTNWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++    L   R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+
Sbjct: 161 YLFVVITTIATLNFLRSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F  +I V+ IV+ GG+ S++    +  +L  +  L   +      
Sbjct: 221 LQAGFIGSVVPKDYTFINSINVLIIVVFGGLGSITGTIVSAIVLGILNMLLQDV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  +AL LV++ R   LL     S 
Sbjct: 275 ---------ASVRMIIYALALVLVMIFRPGGLLGTWELSL 305


>gi|226357077|ref|YP_002786817.1| branched-chain amino acid ABC transporter permease [Deinococcus
           deserti VCD115]
 gi|226319067|gb|ACO47063.1| putative Branched-chain amino acid ABC transporter, permease
           component [Deinococcus deserti VCD115]
          Length = 336

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 65/326 (19%), Positives = 127/326 (38%), Gaps = 24/326 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
                +        +   Y+  +G+ ++IY M A+G++I++G  G L L     + IGAY
Sbjct: 11  WAALFVAMALFPLLRPSGYLLDIGVNVMIYAMLAYGMNILLGYTGQLPLAHAGFFGIGAY 70

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  IL  + G + WL  P++ ++    G ++GL + + +GD  AI TL +  I   ++ K
Sbjct: 71  TVGILTLKAGWNFWLAWPLAVVLCAVLGWLLGLVAFRTKGDAFAILTLAVGVIIMLVINK 130

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W  +T G  G+   +    L    +            +      YY+ L    L+  ++ 
Sbjct: 131 WDSLTGGNEGLNGINPPPGLEGLAQG---------LGMKLSGGFYYLALVALALTVLLVA 181

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
             R +    +   IR  +    S    +   KL A  +S+A  G AG  +A     +   
Sbjct: 182 RTRASVFGRSLIAIRGGEDLARSAGIDVFQHKLRAMMLSTAIAGFAGGLYAVYVGFLGAA 241

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                    V+  +++GG+ +L+      A++  + +   G+  Y               
Sbjct: 242 ATGPVMTFTVLLYLLVGGLGTLAGPLLGPALMYTLTQNLKGLQDY--------------- 286

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTP 345
              +    L L+++   H +      
Sbjct: 287 QYLVFGPLLVLLVMFAPHGIAGGWER 312


>gi|300694315|ref|YP_003750288.1| ABC-type branched-chain amino acid transport system, permease
           component [Ralstonia solanacearum PSI07]
 gi|299076352|emb|CBJ35665.1| putative ABC-type branched-chain amino acid transport system,
           permease component [Ralstonia solanacearum PSI07]
          Length = 322

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 122/325 (37%), Gaps = 24/325 (7%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
               +L L            ++G ++L+  + A  ++ ++G  G+LS      + +GAY 
Sbjct: 18  AIWAVLLLAPYWMPMLGGYTALGTRVLVLGLAAMSVNFLLGFTGVLSFGHAAYFGLGAYG 77

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                     S  L +    ++ G  G ++G  S++ RG Y A+ T+   ++F  I  +W
Sbjct: 78  AGFALKFLAPSTPLALMCGTLLGGIAGALLGALSVRRRGVYFAMVTIAFGQVFYYIAFQW 137

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G  G+    R+          +         +      YY +L    L+  ++ +
Sbjct: 138 SSLTGGDDGLRGFSRMP---------LDLGFTTLDILSNANAFYYFVLACLALATGLMAF 188

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +  +   +    IR+N++    L   +      AF +S  F+G AGA +A   +   P  
Sbjct: 189 ILHSPFGHTLIAIRENERRARFLGIPVNRHIWIAFTLSCFFMGFAGALYALLNNFADPRG 248

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
             +S++   + + ++GGM S         + + + +    +                +  
Sbjct: 249 LHYSQSGDFVMMAVMGGMRSFWGPLLGAVVFVVLQDYLSSL---------------TVNW 293

Query: 321 TTLMVIALFLVILMRSHSLLRLRTP 345
            + + +    ++L     LL +   
Sbjct: 294 MSFVGMLFVAIVLFFPRGLLGVLRR 318


>gi|293605107|ref|ZP_06687499.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292816510|gb|EFF75599.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 299

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 77/305 (25%), Positives = 134/305 (43%), Gaps = 17/305 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ ++ I ILIY++ A+GLS+  G  GL++   V  +AIGAY+  +L  +      + +
Sbjct: 3   AYLIAIAIGILIYMLLAFGLSLHYGFTGLINFGHVGFFAIGAYTSALLSLKGVPVP-VSM 61

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +A  +      +G+ +L+   DYLAI TL  SE  + IL   + +T G  G+    RL
Sbjct: 62  VAAAAFAALAAYPLGMIALRLGSDYLAIVTLGFSESVRMILQTEEWLTRGMHGLPGIPRL 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           +                 S    ++++  +LL +   +  +I  + R+        +RDN
Sbjct: 122 FAGWA-------------SPQTVDLWIMVLLLAVNAGALLLIHLVIRSPFGRVIEAVRDN 168

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  +L       K  +  + +   G+AGAF A     ISP+ F       +   +ILG
Sbjct: 169 EVAVRALGKDPAKFKTRSLMLGAGLAGLAGAFQAHYLTFISPEQFVPLITFYIWIAIILG 228

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+  LS +   T +L+G +E    +  +        +         ++ IAL  V+L R 
Sbjct: 229 GVGRLSGVVAGTVLLVGFLEGSRFVRDFVGGIS---EVQMASVRIGIIGIALICVVLYRP 285

Query: 337 HSLLR 341
             L  
Sbjct: 286 QGLFG 290


>gi|254475559|ref|ZP_05088945.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria sp. R11]
 gi|214029802|gb|EEB70637.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria sp. R11]
          Length = 356

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 51/337 (15%), Positives = 129/337 (38%), Gaps = 9/337 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                ++  L+   F               +I I+V+      +++G  G++S    + +
Sbjct: 15  FLGAILLVILICLAFAPFLFPGVRTVDTAARICIFVVLVASYDLLLGYGGIVSFAHTMFF 74

Query: 75  AIGAYSYVILGSRYGLSI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
            IGAY   +  +  G       +   + A+++ A  +++GL SL+ R  + A+ TL ++ 
Sbjct: 75  GIGAYGVALSSTHLGRGFDSLIIGAGIGAILAAALALVIGLFSLRVRAIFFAMITLAVAS 134

Query: 132 IFQNILIKWKPITNGKAG-IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
               ++ +   +T G+ G  +   R           +         +  ++  YY++ G 
Sbjct: 135 AVAVLVSQISSVTGGEDGLTFKIPRELGPAFKFGKDLFGGELLGVKLNGKLLTYYLIFGG 194

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +    +L +  +      + IR+N     ++   ++  +++A  +S+A   +AG+ +A
Sbjct: 195 SLILFLTLLRIVNSPFGRVLQAIRENDFRAEAIGYRVVIYRVTATCLSAAVAALAGSLYA 254

Query: 251 ASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYY 305
                + PD        I ++ +V++GGM ++        + +     +  L  G++   
Sbjct: 255 IWLRYVGPDTTLSMEIMIDILLMVVIGGMGTIYGAVIGATLFVLAQNYLQNLMSGLSSMT 314

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +  +     R    + +   L +      ++  
Sbjct: 315 EGLPILPELFSPDRWLLWLGVLFILSVYFFPTGVVGR 351


>gi|121609945|ref|YP_997752.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121554585|gb|ABM58734.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 338

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 99/305 (32%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G + L++        IGA +          ++ +    
Sbjct: 37  IINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMIGALTSWSCIGMMQAALPMAPGW 96

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++           +L F  + +A   L  S     ++         +    +  +  +
Sbjct: 97  VLLLLATISAATVAAALNFTIEKVAYRPLRNSPRLAPLITAIGMSILLQTLAMIIWKPNY 156

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +  +L+    F             +L       AS++  +  T +  A R   +N +
Sbjct: 157 --KSYPTLLPSTPFEIGGAYITPTQILILGVTVLALASLMYLVNHTNLGRAMRATAENPR 214

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + F + +    +AG   A++   +   M  F   +   +  + GG+
Sbjct: 215 VAALMGVKPDMVISATFIIGAVLAAVAGIMHASNYGTVQHTM-GFLPGLKAFTAAVFGGI 273

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  +  G        LL      +        + L +++ +R   
Sbjct: 274 GNLAGAVLGGILLGLIEAIGAGYIGTLTGGLLG-----SNYTDIFAFVVLIVILTLRPSG 328

Query: 339 LLRLR 343
           LL  R
Sbjct: 329 LLGER 333


>gi|33598593|ref|NP_886236.1| putative branched-chain amino acid transport system permease
           protein [Bordetella parapertussis 12822]
 gi|33574722|emb|CAE39379.1| putative branched-chain amino acid transport system permease
           protein [Bordetella parapertussis]
          Length = 302

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 57/284 (20%), Positives = 111/284 (39%), Gaps = 23/284 (8%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
               L+ + L A  +  +I  +G++   Y +   GL++  G  G +SL     + + AY 
Sbjct: 9   ALCALVLIALPALLNDPFITHLGVRAATYAIVVMGLTLFAGYTGQISLGHAAFFGLAAYL 68

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             ++       +  +   +A +            L+  G YLA+A++ ++ I Q I+   
Sbjct: 69  SGMMAKAGVPYLVSVPVATAAVGV--------LVLRTSGHYLALASIAVAVIVQVIIKNS 120

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             IT G +G+       F G ++ S               +  YY +L   F    I+  
Sbjct: 121 T-ITGGPSGLTAVPAPDFFGWSLTSD--------------LGYYYYVLLCMFAGFVILRR 165

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +  +   +A + I +N+ A  SL   +   K+ +F +S+ F   AG  F      I PD 
Sbjct: 166 VIDSRTGDALQAIANNELAAQSLGIPVFRYKVLSFTISTLFAAFAGTLFVHYDGFIDPDR 225

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
                +++ + +  +GG+ ++         L  + E       Y
Sbjct: 226 LGIHVSVLFLIMTFVGGIGNIYGSVIGAFALTIIEEYAQEFGQY 269


>gi|312199089|ref|YP_004019150.1| ABC transporter [Frankia sp. EuI1c]
 gi|311230425|gb|ADP83280.1| ABC transporter related protein [Frankia sp. EuI1c]
          Length = 936

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 72/310 (23%), Positives = 119/310 (38%), Gaps = 19/310 (6%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             +    +       I  +    L +V G  G LSL        G Y    L + +GL  
Sbjct: 316 LTTPNDWNDALTATTIGAIICVSLVVVTGYAGQLSLAQYAFAGWGGYVASRLAATHGLPF 375

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            L + +    +   G+++GLP+L+ RG +LAIAT  ++  FQ+IL +  P+T G  G  V
Sbjct: 376 LLALVIGVAAAVPVGVLVGLPALRTRGIHLAIATFGLAYSFQSILFQSVPLTGGLEGTVV 435

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                            F +    V +      V L    L+A +   +RR         
Sbjct: 436 NPP------------TLFGWDIDAVNHPKRYAIVCLVALLLAALVAGNIRRGRSGRRLVA 483

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +R N++A  SL  ++  AKL +FA+S+A  G+ G   A     +    +    +I VI  
Sbjct: 484 VRGNERAAASLGISVYGAKLYSFALSAAIAGLGGVLLAFQASYVDFSQYNVFNSISVIIN 543

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            ++ G+  L     A A + G +              L    S N   T  + + L   +
Sbjct: 544 TVISGVGFLVGTVLAGANVTGGLT-------TKIFGSLITSGSINQYVTLALAVLLVPTL 596

Query: 333 LMRSHSLLRL 342
           +   + L   
Sbjct: 597 VGYPNGLAAR 606



 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 93/288 (32%), Gaps = 24/288 (8%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           IY +   GL +V    G+L+       A+GA +Y  L  R GL     + V+ +ISG  G
Sbjct: 14  IYALAGQGLVLVYRGSGVLNFAQGAFAAVGALAYYDLHVRAGLPTVPSVVVALLISGVAG 73

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           ++M    ++   +   +  +I +     +L +   I  G +   V   L      +    
Sbjct: 74  LLMHFLVMRPLRNAPPLTRVIATLGVMVMLQQLGRIVFGSSIRIVPSFLPSKSIDI---- 129

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                        +  + +L     +SA++    R +        + +N++A      + 
Sbjct: 130 ------GGGAAVGLDRFVLLGLAIVVSATLWAVYRYSRFGAITSAVAENERAAQLAGHSP 183

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
                  +A+ +   G+AG   A         +       +  ++V      S      A
Sbjct: 184 DVIAAVNWALGAMLAGLAGILIAPIAGLDINTLVLLIIPALATAMVAR--FDSFVGALIA 241

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           + ++                               +  + + LV++ R
Sbjct: 242 SLVIGIAQSEITNY------------VRAAGWGDAVPFLLVILVLVAR 277


>gi|91787729|ref|YP_548681.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91696954|gb|ABE43783.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas sp. JS666]
          Length = 340

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 72/317 (22%), Positives = 130/317 (41%), Gaps = 27/317 (8%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
            L + +     + Y   +    LI+++   GL++ +G  G  SL     + IGAY+  IL
Sbjct: 17  ALLVLVAPQYLKNYGIYLLTYWLIFIIATMGLNLTIGYAGQKSLGHAAFFGIGAYTVAIL 76

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                   WL +P +A+I  A G+I+G P+L+ +  YLA ATL  +     ++   + +T
Sbjct: 77  MKAGFS-FWLGLPAAALICFAVGLILGFPALRVQTIYLAFATLGFNTAIWLVMRNEEWLT 135

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G  GI    R                     +      YY +L +  + + ++  L R+
Sbjct: 136 GGTFGINNIARPA--------------ILGYSLEANRPYYYFVLVVTLILSGLLWGLLRS 181

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
               A+R +RDN     SL   I    L +FA+ + + G+AGA FA+    I P  F   
Sbjct: 182 PWGKAFRALRDNPIRAESLGVDIRNYTLLSFAIGAVYAGIAGALFASLVQFIEPAPFAVG 241

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
            +I++  +V++GG           A+ + + E    +                  +  + 
Sbjct: 242 ASIMMYLMVVVGGAGYFLGPIVGAAVGVVLPEWLRDV------------PGVANWYLPMF 289

Query: 325 VIALFLVILMRSHSLLR 341
             A+ ++++     LL 
Sbjct: 290 GAAVVVLMVWLPDGLLS 306


>gi|19704762|ref|NP_604324.1| branched chain amino acid ABC transporter permease [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19715090|gb|AAL95623.1| Branched-chain amino acid transport system permease protein livM
           [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
          Length = 285

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 68/307 (22%), Positives = 126/307 (41%), Gaps = 45/307 (14%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY----GLSIWLLIPVSA 100
            ILI V+ A  L++ VG LG ++L      +IGAY+  +L             + + +  
Sbjct: 1   MILINVILAASLNVTVGCLGQITLGHAGFMSIGAYTAALLTKSGLLSGYPGYVVALIIGG 60

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +++G  G I+G+P+L+  GDYLAI TL   EI + +LI++   T G  G+    R+    
Sbjct: 61  LVAGIIGFIIGIPALRLTGDYLAIITLAFGEIIR-VLIEYFKFTGGAQGLTGIPRVNNFT 119

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                                    ++  +   S   +  +  +    A   IR+++ A 
Sbjct: 120 -------------------------LIYFITIFSVIFMYSVMTSRHGRAVLAIREDEIAS 154

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +      + K  AF +S+ F G+AG  +A +   +    F ++ +I ++ +V+LGGM S
Sbjct: 155 GASGINTTYYKTFAFVLSAIFAGIAGGIYAHNLGILGAKQFDYNYSINILVMVVLGGMGS 214

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
            +    +  +L  + E+      Y                  +  + L +++L R   LL
Sbjct: 215 FTGSILSAIVLTILPEVLRSFAEY---------------RMIVYPLILIIMMLFRPKGLL 259

Query: 341 RLRTPSN 347
                  
Sbjct: 260 GREEFQI 266


>gi|17229441|ref|NP_485989.1| permease protein of ABC transporter [Nostoc sp. PCC 7120]
 gi|17131039|dbj|BAB73648.1| permease protein of ABC transporter [Nostoc sp. PCC 7120]
          Length = 372

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 100/349 (28%), Gaps = 27/349 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++      ++ +  VV   L+ + +      ++  ++  + L   + A G+ ++ G  GL
Sbjct: 1   MKKGGRLILIEVGVVVAIALILILIMPLVLSEFRLNLLGRFLSLAIVALGIDLIWGYTGL 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           LSL   I + +G Y+  +          L   +                         + 
Sbjct: 61  LSLGHGIFFGLGGYAIAMYLKLQIPEGELPDFMELYGVTELPWFWRPFYSFPIAVAAVVI 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE----- 180
              +       L+    I      I     +           +FF   +  + +      
Sbjct: 121 IPGLLAGLLGYLVFRNRIKGVYFSILTQAAIIVFFNFFNGQQQFFNGTNGLIDFTTLFGA 180

Query: 181 --------IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
                      Y + +     +  I  WL           IRD++             K 
Sbjct: 181 TVSDPKTKFIFYTLTVLFLAATYGICRWLTSGRFGRLLIAIRDDESRVRFSGYDPTDFKT 240

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             FAVS A  G+AGAF+      +SP     + +I ++  V +GG  +L      T ++ 
Sbjct: 241 LVFAVSGAIAGIAGAFYTLQSGSVSPRAMDIAFSIEMVIWVAVGGRATLIGAVLGTLLVN 300

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                                  F             +V+ +    L+ 
Sbjct: 301 YARAFLSE--------------QFAEIWLFFQGALFLIVVTVLPDGLVG 335


>gi|306829182|ref|ZP_07462372.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus mitis ATCC
           6249]
 gi|304428268|gb|EFM31358.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus mitis ATCC
           6249]
          Length = 318

 Score = 94.9 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 80/340 (23%), Positives = 143/340 (42%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + +   L +    L+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNILWLFLLLAGYGLISVLVSAGVLNLFHVQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  S    + +  + + A+ISGA  +++G+P+L+ +GDYLA+ATL
Sbjct: 66  HAGFMAIGAYAAAIIGSKSPTYGAFFGAMLIGALISGAVALLVGIPTLRLKGDYLAVATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI +  +I    +TNG AGI                                    +
Sbjct: 126 GVSEIIRIFIINGGSLTNGAAGILGIPNFTNWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++    L   R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+
Sbjct: 161 YLFVVITTIATLNFLRSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F  +I V+ IV+ GG+ S++    +  +L  +  L   +      
Sbjct: 221 LQAGFIGSVVPKDYTFINSINVLIIVVFGGLGSITGTIVSAIVLGILNMLLQDV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  +AL LV++ R   LL     S 
Sbjct: 275 ---------ASVRMIIYALALVLVMIFRPGGLLGTWELSL 305


>gi|320530484|ref|ZP_08031542.1| amino acid or sugar ABC transport system, permease protein
           [Selenomonas artemidis F0399]
 gi|320137317|gb|EFW29241.1| amino acid or sugar ABC transport system, permease protein
           [Selenomonas artemidis F0399]
          Length = 316

 Score = 94.9 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 72/327 (22%), Positives = 126/327 (38%), Gaps = 41/327 (12%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L A+    ++    GA     +     I   + +M A  L+++ G  G  SL      
Sbjct: 11  MLLFALAIYGVIMGLTGAGVLSAFWQLNLIFAGLNIMLAASLNLINGYTGQFSLGHAGFM 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AIGAY  VIL + + L     +      +G  G ++GLP+L+ RGDYLAIATL + EI +
Sbjct: 71  AIGAYVGVILTTNFHLPFIAALIAGGAAAGLLGALIGLPTLRLRGDYLAIATLGLGEIVR 130

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++I    +  G AG      L                              +  +   +
Sbjct: 131 IVIINAPYV-GGAAGFKGIPHLTNFT-------------------------WVFFIMLAT 164

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             II     +    A   IR+N+ A  ++       K+ AF + +A  G+AG  F  +  
Sbjct: 165 LFIIKNFVNSRHGRACLAIRENEIAAEAMGINTTRYKVLAFTIGAALAGVAGVLFGHNMY 224

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            +SP  F F ++  ++ +V++GG+ S++       ++  +                    
Sbjct: 225 ILSPASFTFMQSFNILIMVVMGGLGSMTGSIAGALVVTFLSAALASF------------- 271

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  +AL L++  R   L  
Sbjct: 272 --PNARMIVYALALILMMFYRPQGLFG 296


>gi|295099269|emb|CBK88358.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           (TC 3.A.1.4.-) [Eubacterium cylindroides T2-87]
          Length = 317

 Score = 94.9 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 81/341 (23%), Positives = 141/341 (41%), Gaps = 43/341 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+K +    LLAV   +L  L +       Y       I I ++ A  L++V+G  G  S
Sbjct: 6   LSKENIAWLLLAVGAFVLCSLLMNLGIINSYYQITLYNICINIILAVSLNLVIGICGQFS 65

Query: 68  LNCVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           L       IGAY+  I+           + I V   IS    +I+ +P+L+ RGDYLAIA
Sbjct: 66  LGHAGFMCIGAYAAGIITKMMPNFGGFMIGILVGFAISALVALIVSIPTLRLRGDYLAIA 125

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL  +EI + ++     ITNG AG+    +L                             
Sbjct: 126 TLGFAEIIRILVQNM-KITNGAAGLNGIPQLTSWP------------------------- 159

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +L+    +S  I+     +A   A  +IR+++ A  ++       K+ AF + +    +A
Sbjct: 160 LLMIGVVISIMIVCNFTHSAPGRACISIREDEIASEAMGINTTKYKVIAFVIGALLASLA 219

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA +A +   I P+ F F+++I ++ +V+ GGM S++                  +    
Sbjct: 220 GALYACNFYVIKPNQFTFNKSIDILVMVVFGGMGSMT---------------SSVIAAIV 264

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
              +     +F+     +  +AL  +++ +   LL  R  S
Sbjct: 265 IGIINMVLANFSEIRMIIYGLALVAIMIFKPTGLLGQRELS 305


>gi|306834094|ref|ZP_07467214.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus bovis ATCC
           700338]
 gi|304423667|gb|EFM26813.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus bovis ATCC
           700338]
          Length = 317

 Score = 94.9 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 70/340 (20%), Positives = 135/340 (39%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     L VV   +L           Y   + + I I ++   G ++V+G  G  +L 
Sbjct: 6   KINLSWLALIVVLFGILEFLATTNILNLYYIQILMGIGISILMGLGTNLVLGFSGQFTLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+  +       +  + V  +I+    ++ G+P+L+ +GDYLAIATL
Sbjct: 66  QAGFMAIGAYATAIITQQNPTYGGFYFSMLVGIVIAVLVALVFGIPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            M+EI + +++    +TNG AG+                                   V+
Sbjct: 126 GMAEIIRIVIVNGGDLTNGAAGLTGILPYTTWP-------------------------VI 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                    +IL   R++I     ++R+++ A  ++   I   K+  F + +    +AG+
Sbjct: 161 FIFVVAITILILNFLRSSIGRQVISVREDEIAAEAMGVNITRMKVLIFVMGAIISAIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +      + P  F   ++I  + I +LGG+ S++    A  +L  +      +      
Sbjct: 221 LYVGYIGTVVPKDFTIMKSIDYLIIAVLGGLGSITGTILAAIVLGILNMFLQNV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                    +     +  +AL LV++ R   LL  +  + 
Sbjct: 275 ---------SNLRMIIYSLALILVMIFRPGGLLGTKEFTL 305


>gi|294791636|ref|ZP_06756784.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Veillonella sp. 6_1_27]
 gi|294456866|gb|EFG25228.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Veillonella sp. 6_1_27]
          Length = 337

 Score = 94.9 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 57/309 (18%), Positives = 120/309 (38%), Gaps = 19/309 (6%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y   + +  +I  +    +   +   G LSL      ++GAY   IL  +  L I 
Sbjct: 3   LLNPYYLQIVMFFIINAIMGISIYFTLA-SGQLSLGAAGFMSVGAYVGAILSLKADLPIV 61

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN--GKAGIY 151
           L I +  +++    +I+GLP+ + RG YLAIATL   E+ + I +         G +GI 
Sbjct: 62  LGIIIGGLVASLVAVIIGLPTTRLRGLYLAIATLGFGEVVRVIFLNLDITNGALGLSGIP 121

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              +                   +     +    +LL +  L  +  + +  + +  A+ 
Sbjct: 122 SIPQELTNYAYEFDFDGLMGID-AVAWGNLMAIIILLAILVLIIAFCVRINNSRVGRAFA 180

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            I+ +  A   +   +++ K+ AF + +   G+ G  +A   + I+P  F + + + ++ 
Sbjct: 181 AIKADDHAAELMGINVVYYKMMAFIIGAFIAGIGGGLYAHITNFINPTDFSYHKVVQILL 240

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             + GG   +      + IL  + E+   ++ Y                  +    L ++
Sbjct: 241 FPVFGGSNVVWGSVLGSFILTLLPEVLRFLSDY---------------RDIIYGALLVIL 285

Query: 332 ILMRSHSLL 340
           + +R   +L
Sbjct: 286 MAVRPDGIL 294


>gi|282899135|ref|ZP_06307116.1| inner-membrane translocator [Cylindrospermopsis raciborskii CS-505]
 gi|281196051|gb|EFA70967.1| inner-membrane translocator [Cylindrospermopsis raciborskii CS-505]
          Length = 381

 Score = 94.9 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 49/347 (14%), Positives = 103/347 (29%), Gaps = 27/347 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             K   ++ +  V+   LL L +      ++  ++  + L   +   GL ++ G  GLLS
Sbjct: 12  QAKKSILVEIAVVMAIALLLLVIMPLVLTEFRLNLLGRFLSLAIVGLGLDLIWGYTGLLS 71

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK----------- 116
           L   I + +G Y+  +       S  L   +                             
Sbjct: 72  LGHGIFFGLGGYAIAMYLKLQVPSGELPDFMGLYGVTELPWFWHPFYSFGFAVIAVILIP 131

Query: 117 --FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
               G    +      +     ++    +           +L+     + +         
Sbjct: 132 GLLAGVLGYLVFRNRIKGVYFSILTQAAVIIFFNFFNGQQKLFNGTNGLTAFKTLLGINL 191

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
           +    ++ +Y + +     +  +  WL           IRD++             K+  
Sbjct: 192 TDRGMQLVLYSLTILFLIFTYGLCRWLTTGRFGRLLMAIRDDETRVRFCGYDPTEYKVLV 251

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           FAVS A  G+AGAF+A     +SP       +I ++  V +GG  +L+     T ++   
Sbjct: 252 FAVSGAIAGIAGAFYAIQSGSVSPRAMDIGFSIEMVIWVAVGGRGTLTGAILGTLLVNYA 311

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                                F             +V+ +    ++ 
Sbjct: 312 RTFLSE--------------QFAEIWLFFQGALFLVVVTVLPDGMMG 344


>gi|306825607|ref|ZP_07458946.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
 gi|304431968|gb|EFM34945.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
          Length = 318

 Score = 94.9 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 80/340 (23%), Positives = 143/340 (42%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + +   L +    L+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNILWLFLLLAGYGLISVLVSAGILNLFHVQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  S    + +  + + A+ISGA  +++G+P+L+ +GDYLA+ATL
Sbjct: 66  HAGFMAIGAYAAAIIGSKSPTYGAFFGAMILGALISGAVALLVGIPTLRLKGDYLAVATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI +  +I    +TNG AGI                                    +
Sbjct: 126 GVSEIIRIFIINGGSLTNGAAGILGIPNFTNWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++    L   R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+
Sbjct: 161 YLFVVVTTIATLNFLRSPIGRSTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F  +I V+ IV+ GG+ S++    +  +L  +  L   +      
Sbjct: 221 LQAGFIGSVVPKDYTFINSINVLIIVVFGGLGSITGTIVSAIVLGILNMLLQDV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  +AL LV++ R   LL     S 
Sbjct: 275 ---------ASVRMIIYALALVLVMIFRPGGLLGTWELSL 305


>gi|226939146|ref|YP_002794217.1| ABC-type branched-chain amino acid transport system, permease
           component [Laribacter hongkongensis HLHK9]
 gi|226714070|gb|ACO73208.1| ABC-type branched-chain amino acid transport system, permease
           component [Laribacter hongkongensis HLHK9]
          Length = 354

 Score = 94.9 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 71/328 (21%), Positives = 130/328 (39%), Gaps = 17/328 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L      L  F+ +    S   +  + I  L+  + A GL+I+ G  G LSL      A+
Sbjct: 27  LFVGALLLAAFVAVPGLASDYLLSGILIPFLVLSLAALGLNILTGYAGQLSLGSAAFMAV 86

Query: 77  GAYSYVILGSR-YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GA++      R  GL +   + +   ++   G++ GLPSL+ +G YLA+ATL      + 
Sbjct: 87  GAFATYNFMLRIPGLPLLPALLLGGGVAAVVGVLFGLPSLRIKGFYLAVATLAAQFFIEW 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L K+   +N  +   ++                       +      Y   LG+  + A
Sbjct: 147 ALTKFGWFSNYSSSGVISAPALE-------------VFGLPLDTPASKYLFTLGVVAVMA 193

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRD 254
                + R++I  AW  +RD   A   +   ++  KL+AFAVSS + G+AG  +A     
Sbjct: 194 LAAKNMVRSSIGRAWMAVRDMDVAAEVIGIPMLKTKLTAFAVSSFYCGVAGGLWAFILLG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            + P  F    +  ++ ++I+GG+ S+       A ++ +  +                 
Sbjct: 254 TVDPQAFDLHRSFQILFMIIIGGVGSILGSFLGAAFIVLLPIVLN--LGGQLLHGAVSSS 311

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
             +     L    +   +++    L RL
Sbjct: 312 FLSNLEMMLFGGLIIFFLIVEPLGLARL 339


>gi|72384237|ref|YP_293591.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72123580|gb|AAZ65734.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 344

 Score = 94.9 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 56/301 (18%), Positives = 118/301 (39%), Gaps = 28/301 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           M +++L + +FA   ++++G  GLLS          AY        +GL+  L + +   
Sbjct: 26  MLMKVLCFALFACAFNLLLGYTGLLSFGHAAFLGTAAYISGYGMKTWGLTPELGLLLGTA 85

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           +S A G ++G  +++ +G Y A+ TL ++++F  + ++    T G+ G+    R      
Sbjct: 86  VSAAAGFVVGALAIRRQGIYFAMITLALAQMFYFLFLQAP-FTGGEDGMQAISR------ 138

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F    +  ++ MYY +L +   +  +I  +  +      + IR+N+    
Sbjct: 139 -------GRLFGLIDLASDLRMYYFVLAIFLFAFWLIHRIIHSPFGQILKAIRENEARTT 191

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   KL AF +S+   G+AGA         +     +  +  V+ + +LGG+ + 
Sbjct: 192 SLGYDVARYKLLAFVLSAGLAGLAGATKTLVFQFATLTDAHWHTSGEVVLMTLLGGLGTA 251

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   I++ +                          T +M     + +L     ++ 
Sbjct: 252 FGPVVGAGIVVAIQNALAD--------------KVGSMITVIMGSIFVVCVLAFRRGIVG 297

Query: 342 L 342
            
Sbjct: 298 E 298


>gi|78063381|ref|YP_373289.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia sp. 383]
 gi|77971266|gb|ABB12645.1| amino acid/amide ABC transporter membrane protein 1, HAAT family /
           amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Burkholderia sp. 383]
          Length = 603

 Score = 94.9 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 73/324 (22%), Positives = 130/324 (40%), Gaps = 33/324 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V  + L   L    +  Y+        +Y + A  L++V G++G +SL       IGA
Sbjct: 312 VLVALIALAAVLPWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGA 371

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L S  G S  + IP + +I+   G ++  P+ + RG Y++IATL + E+   +++
Sbjct: 372 YASALLSSDLGWSPAVTIPCAGVITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVIL 431

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  +T G  GI     L +                         Y+    +  + A + 
Sbjct: 432 NWDGLTRGPLGITGIAPLPW------------------ATTARAAYWFTFAVLVVFALVQ 473

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L R+ +    R +R++  A  +        K  AFAV     G++G   A     I+ 
Sbjct: 474 VRLLRSHLGRTLRAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINH 533

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F    +I+ +++VILGG+ ++         LIG+ EL      Y              
Sbjct: 534 QTFDSQVSILALTMVILGGLGNVLGGIAGAIALIGLPELFRWAADY-------------- 579

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
               +  + L L++  R   LL  
Sbjct: 580 -RMLIYGLVLLLLVRFRPQGLLGT 602



 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 107/305 (35%), Gaps = 25/305 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  I   IY + A GL+++ G   L++      Y +GA+   +  +R+GL + + +
Sbjct: 6   DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +  GA G+ +    L+       IA L+ +     IL +   +  G     V   L
Sbjct: 66  AAVVVGCGALGVAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             +          +       +A +  +LR T +  A R    +
Sbjct: 126 PDWHVR-----------IAGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +     + FA++ A  G++G       + I P M  F   +  +  +++G
Sbjct: 175 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++      + +L  V      +    +  L  F               L + ++ R 
Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280

Query: 337 HSLLR 341
           + L  
Sbjct: 281 NGLFS 285


>gi|75910560|ref|YP_324856.1| inner-membrane translocator [Anabaena variabilis ATCC 29413]
 gi|75704285|gb|ABA23961.1| urea ABC transporter membrane protein [Anabaena variabilis ATCC
           29413]
          Length = 372

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 99/349 (28%), Gaps = 27/349 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++      ++ +  VV   L  + +      ++  ++  + L   + A G+ ++ G  GL
Sbjct: 1   MKQGGRLILVEVGVVVAIALFLILIMPLVLSEFRLNLLGRFLSLAIVALGIDLIWGYTGL 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           LSL   I + +G Y+  +          L   +                         + 
Sbjct: 61  LSLGHGIFFGLGGYAIAMYLKLQIPEGELPDFMGLYGVTELPWFWRPFYSFPIAVATVVI 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE----- 180
              +       L+    I      I     +           +FF   +  + +      
Sbjct: 121 VPGLLAGLLGYLVFRNRIKGVYFSILTQAAIIVFFNFFNGQQQFFNGTNGLIDFTTLFGA 180

Query: 181 --------IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
                      Y + +     +  I  WL           IRD++             K 
Sbjct: 181 TVSDPKTKFIFYTLTVLFLAATYGICRWLTSGRFGRLLIAIRDDESRVRFSGYDPTDFKT 240

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             FAVS A  G+AGAF+      +SP     + +I ++  V +GG  +L      T ++ 
Sbjct: 241 LVFAVSGAIAGIAGAFYTLQSGSVSPRAMDIAFSIEMVIWVAVGGRATLIGAVLGTLLVN 300

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                                  F             +V+ +    L+ 
Sbjct: 301 YARAFLSE--------------QFAEIWLFFQGALFLIVVTVLPDGLVG 335


>gi|313892767|ref|ZP_07826348.1| branched-chain amino acid ABC transporter, permease protein
           [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442698|gb|EFR61109.1| branched-chain amino acid ABC transporter, permease protein
           [Veillonella sp. oral taxon 158 str. F0412]
          Length = 338

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 53/309 (17%), Positives = 121/309 (39%), Gaps = 19/309 (6%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y   + +  +I  +    +   +   G LSL      ++GAY   +L  +  L I 
Sbjct: 4   LLNPYYLQIVMFFIINAIMGISIYFTLA-SGQLSLGAAGFMSVGAYVGAMLSLKAELPIV 62

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN--GKAGIY 151
           + I +  +++    +I+GLP+ + +G YLAI+TL   E+ + I +         G +GI 
Sbjct: 63  VGILIGGLVASLVAVIIGLPTTRLKGLYLAISTLGFGEVVRVIFLNLDVTNGALGLSGIP 122

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              +          +       +      I +  +L  +  + A   + +  + +  A+ 
Sbjct: 123 SIPQELTNYAYEFDMDGLMGLDAVTWGNLIAIIILLAILVLIIAF-CVRINNSRVGRAFA 181

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            I+ +  A   +   +++ K+ AF + +   G+ G  +A   + I+P  F + + + ++ 
Sbjct: 182 AIKADDHAAELMGINVVYYKMMAFIIGAFIAGIGGGLYAHITNFINPTDFSYHKVVQILL 241

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             + GG   +      + IL  + E+   ++ Y                  +    L ++
Sbjct: 242 FPVFGGSNVVWGSVLGSFILTLLPEVLRFLSDY---------------RDIIYGALLVIL 286

Query: 332 ILMRSHSLL 340
           + +R   +L
Sbjct: 287 MAVRPDGIL 295


>gi|322387416|ref|ZP_08061026.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus infantis
           ATCC 700779]
 gi|321141945|gb|EFX37440.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus infantis
           ATCC 700779]
          Length = 318

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 73/325 (22%), Positives = 135/325 (41%), Gaps = 42/325 (12%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           ++ L +       +   +  QI I ++ A GL+++VG  G  SL      AIGAY+  I+
Sbjct: 21  VISLLVSFGILNLFHIQILEQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80

Query: 85  GS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           GS      + +  + + A+I+G   +++G+P+L+ +GDYLA+ATL ++EI + +++    
Sbjct: 81  GSKSPTYGAFFGAMLLGAIIAGLVALVVGIPTLRLKGDYLAVATLGVAEIIRILIVNGGD 140

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +TNG AGI                                    +     ++    L   
Sbjct: 141 LTNGAAGILGIPNFTNWQM-------------------------VYIFAVITTIATLNFL 175

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+ I     ++R+++ A  S+       K+ AF   +    +AG+  A     + P  + 
Sbjct: 176 RSPIGRLTLSVREDEIAAESVGVNTTKIKIIAFVFGAMTASIAGSLQAGFIGSVVPKDYS 235

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  +I V+ IV+ GG+ S++    A  +L  +      +                     
Sbjct: 236 FINSINVLIIVVFGGLGSITGAIVAAIVLGILNMFLQDV---------------ASVRMI 280

Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347
           +  +AL LV++ R   LL     S 
Sbjct: 281 IYALALVLVMIFRPGGLLGTWELSL 305


>gi|312879834|ref|ZP_07739634.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Aminomonas paucivorans DSM 12260]
 gi|310783125|gb|EFQ23523.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Aminomonas paucivorans DSM 12260]
          Length = 297

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 69/304 (22%), Positives = 132/304 (43%), Gaps = 40/304 (13%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y + + I + I  + A G+S++ G  G+ SL      A+GAY+  IL   YGL  +  + 
Sbjct: 4   YGEGIVILLCINCIAALGISLLTGFTGIFSLGHAGYMALGAYTVAILTVEYGLPWFAALI 63

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           ++ +++     ++G+P+LK  GDY AIA++ + E  + I+  W+ +T G  G    D   
Sbjct: 64  LAGIVAMVLAYLIGIPTLKLMGDYYAIASIGLGEAIRLIIENWQSVTRGARGYPGIDAFT 123

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L                          V +G   + ++ +  L       A++  RD+ 
Sbjct: 124 TLP-------------------------VAVGCLVVMSAAMFLLINGNFGRAFKACRDDY 158

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A   L       ++ + A+S+ + G+AG   A     I P MF  +++  + ++V+ GG
Sbjct: 159 LAASLLGFHTANYRVFSLAISAFYCGVAGGLLAGFMSFIQPVMFDMNKSTELTAVVVFGG 218

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+S     T I+  V EL   ++ Y                  +  + L +++++R  
Sbjct: 219 LGSMSGCLLGTVIITLVTELFRPISQY---------------RMLIYGLVLVVIMVVRPE 263

Query: 338 SLLR 341
            L+ 
Sbjct: 264 GLMG 267


>gi|119899338|ref|YP_934551.1| putative branched-chain amino acid transport permease [Azoarcus sp.
           BH72]
 gi|119671751|emb|CAL95665.1| putative branched-chain amino acid transport permease [Azoarcus sp.
           BH72]
          Length = 326

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 71/331 (21%), Positives = 130/331 (39%), Gaps = 26/331 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L+     +L  L         +   M  ++L+  +FA  L ++VG  GL+SL     + 
Sbjct: 9   GLMVAKVVVLAALLAFPLVGSAFYTEMVAKVLVMAIFAMSLDLLVGFTGLVSLGHAAYFG 68

Query: 76  IGAYSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           I AY   +L  +Y   ++W+ +P S + +     ++G+  L+ +G Y  + TL  +++  
Sbjct: 69  IAAYVVALLTPKYDPANLWIALPASVLGAALAAFVIGIFVLRTKGIYFIMVTLAFAQMAY 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +  G  GI             +       +    +   + MYY ++GM  L 
Sbjct: 129 YVFHD-TALGGGSDGI---------YINFKPDAAIAGWAPFDLNEPMHMYYFIVGMLVLV 178

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            + +  L R+        IR N+    SL       KL+AF V+ A  G+AG  +     
Sbjct: 179 FAFLTLLLRSPFGKVLVGIRSNEHRMQSLGYATFRYKLAAFTVAGALAGVAGFLYGVLFG 238

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P+   + ++  V+ +VILGGM +L          IG+ E+  G   ++         
Sbjct: 239 FVTPEYLSWHQSGNVLMMVILGGMGNLVGAVLGAFAFIGLQEVFSGWTKHW--------- 289

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                   LM   +   +L     L  L   
Sbjct: 290 ------QLLMGGVIVAAVLFMPGGLSALPRR 314


>gi|256828332|ref|YP_003157060.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
 gi|256577508|gb|ACU88644.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
          Length = 358

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 50/342 (14%), Positives = 116/342 (33%), Gaps = 8/342 (2%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +    ++           YI S+ + + + ++ +   +IV G +G  +       A+G
Sbjct: 9   LLLAITGVIVFMSHQEYIDLYIQSVIMFMGVNIILSTSFNIVNGYMGEFACGHAGFMAVG 68

Query: 78  AYSYVIL--GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           AY   ++         ++    +    +        L           +  +   +   +
Sbjct: 69  AYVTSVVNVMLFTDDKVFGAALLPPETAVYLFPFTLLIGGAAAAVAGVLVAIPSFKTRDD 128

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L       N      + +     G      ++   F  +      ++   ++   F + 
Sbjct: 129 YLAIITIAANFIIISTIINIDKIGGARGFMGMKKVLFAMTDSYDIPWILLWVMIFTFGTV 188

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            II     +        I+ ++ A   ++      KL AF +SS   G+AG  FA     
Sbjct: 189 FIIRRYVTSTYGKGIIAIKQDEVAAEIMSVNTNRMKLVAFMLSSGLAGIAGGLFAHILGY 248

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           I+P+ F   ++   + +V LGGM SLS    +  +   ++E    +  +   ++      
Sbjct: 249 INPNSFGILKSTECLVMVYLGGMGSLSGSVISAILFTLLLESLRFIIPWMDTAMHYMHLL 308

Query: 316 F------NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                   +    ++ + L L++  R   ++  R  S+   +
Sbjct: 309 PDSYELSQVWKWVIIPLILILLMQFRPEGIMGNRELSDVFPK 350


>gi|90425185|ref|YP_533555.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90107199|gb|ABD89236.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 537

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 92/297 (30%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       IGAY   ++      S   L   S +I+     ++ 
Sbjct: 258 AAIGLAITFGVMGVINMAHGEMVMIGAYVTFVVQETIRTSYPALFDYSLLIAVPLAFLVA 317

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                      +I   +     + +L  W      +  +              S      
Sbjct: 318 GLIGVIIER--SIIRFLYGRPLETLLATWGLSLVLQQAVRTLFGPTNREVGNPSW-MSGA 374

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    ++      ++L     + A ++  LR T++    R +  N++   S+        
Sbjct: 375 FELGQIVITYNRLWILCFTLAVFAILLAMLRYTSLGLEMRAVTQNRRMAASMGIATSRVD 434

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   A S+          S  I    +V+ GG+ +L         L
Sbjct: 435 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFTL 492

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +    M                      +++ + L I  R   L  L+  +  
Sbjct: 493 GIANKFLEPMAGAVLGK-------------IAILVLIILFIQKRPRGLFALKGRAIE 536


>gi|221069526|ref|ZP_03545631.1| inner-membrane translocator [Comamonas testosteroni KF-1]
 gi|220714549|gb|EED69917.1| inner-membrane translocator [Comamonas testosteroni KF-1]
          Length = 637

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 58/313 (18%), Positives = 121/313 (38%), Gaps = 33/313 (10%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                    Y   +   I +  +FA  L  ++G  G+ S      + +GAY   +L    
Sbjct: 339 MASGAAGGSYATVLLADIFVAALFASSLHFILGPGGMHSFGHAAYFGLGAYGAALLVRTL 398

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            L +   + +  + + A  ++ G   ++  G YL + TL  ++I   I+ +W   T G  
Sbjct: 399 DLPMEAALLLGPLAAAAGALLYGWFCVRLSGVYLTMLTLAFAQISWAIVFQWDDFTGGSN 458

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G+       +                         Y++ LG+C L   ++  L  + +  
Sbjct: 459 GLTGVWPPEW------------------ASQGPAFYWLALGICALGIYLLRRLLFSPLGY 500

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           A R  RD+     ++   +   + +AF ++  F G+AGA FA S+  ++PD    ++++ 
Sbjct: 501 ALRASRDSALRADAIGIDVRRIQWTAFVIAGLFAGLAGALFAFSKGGVAPDAMSVTKSVD 560

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
            + +V+LGG+ +L+      A    + +       Y+                 LM   +
Sbjct: 561 ALVMVLLGGVQTLAGPVVGAAAFTWLHDTVARNTEYWRA---------------LMGATM 605

Query: 329 FLVILMRSHSLLR 341
            +++L+    +  
Sbjct: 606 LILVLLAPQGIAG 618



 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 97/305 (31%), Gaps = 17/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--SRYGLSIWLLI 96
           + +         + + GLS++ G    ++      Y +GA+            +  W  +
Sbjct: 10  LLNGLASASSLFLVSVGLSLIFGVTRTINFAHGSFYMLGAFIAYSSVDRLSPHIGFWPAL 69

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V+ +  GA G +     L+       +  L+ +     ++        G          
Sbjct: 70  LVAPLACGALGALTETLLLRRIYKAPELFQLLATFALVLVIKDAALWLWGP--------- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                  R+             +  +  +++     +   + L L RT      R    +
Sbjct: 121 -EELFGPRATGLEGSVEILGRQFPTYDLFLIAVGPCVLLGLTLLLTRTRFGTLVRAATQD 179

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +L     +   + FA+ +   G+ GA                        +V++G
Sbjct: 180 REMVGALGVNQAWLFTAVFALGTLLAGLGGALQLPREPA--SLEMDMLTIGAAFVVVVVG 237

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM S+     A  ++  +  +C  +       +  F+ SF+     +  + + +V++ R 
Sbjct: 238 GMGSIPGAFMAALLVAELKAVCIWLG---VQEIAGFELSFSKLTLVVEFLVMAVVLIWRP 294

Query: 337 HSLLR 341
             LL 
Sbjct: 295 WGLLG 299


>gi|257462891|ref|ZP_05627297.1| branched chain amino acid ABC transporter permease [Fusobacterium
           sp. D12]
 gi|317060514|ref|ZP_07924999.1| branched chain amino acid ABC transporter [Fusobacterium sp. D12]
 gi|313686190|gb|EFS23025.1| branched chain amino acid ABC transporter [Fusobacterium sp. D12]
          Length = 323

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 73/340 (21%), Positives = 139/340 (40%), Gaps = 45/340 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             I  LL  +  L++ L L ++   +Y  S+ I I I ++ A  L+I VG LG +++   
Sbjct: 9   YIISFLLLFLVYLMMTLLLHSSMFSRYQISVIILICINIILAVSLNITVGCLGQITIGHA 68

Query: 72  IAYAIGAYSYVILGSR----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
              ++GAY+  +              + + +  ++SG  G+I+G+P+L+  GDYLAI TL
Sbjct: 69  GFMSVGAYTAALFSKSALVAGVPGFLIALILGGIVSGIIGVIIGIPALRLNGDYLAIITL 128

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              EI + + I++   T G  G+    +                              ++
Sbjct: 129 AFGEIIR-VFIEYFDFTGGAQGLRGIPKFNNFD-------------------------LI 162

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +   S  ++  L  +    A   IR+++ A  +      + K  AF +S+ F G+AG 
Sbjct: 163 YWIMVFSVILMFSLMTSRHGRAILAIREDEIASSASGINTTYYKTFAFTLSAIFAGIAGG 222

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A +   +    F ++ +I ++ +V+LGGM S +    A  +L  + E+    + Y   
Sbjct: 223 IYAHNLGVLGAKQFDYNYSINILVMVVLGGMGSFTGSIIAAIVLTLLPEVLREFSDY--- 279

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                             + L  +++ R   LL       
Sbjct: 280 ------------RMIAYAVILIFMMIFRPKGLLGREEFRL 307


>gi|159044524|ref|YP_001533318.1| putative branched-chain amino acid transport system / permease
           [Dinoroseobacter shibae DFL 12]
 gi|157912284|gb|ABV93717.1| putative branched-chain amino acid transport system / permease
           component [Dinoroseobacter shibae DFL 12]
          Length = 317

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 60/315 (19%), Positives = 118/315 (37%), Gaps = 22/315 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--------YVILGSRY 88
            Y+        I  +   GL++  G+ GL +   V  +  G Y+               +
Sbjct: 6   SYLVFFATIASILAIAVLGLNLHWGNTGLFNGGVVAFFGAGGYATLILGGTPQAAHLGGF 65

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           GL   L +    +I+G    ++GL +++ R DYLAIAT  ++  F+N++   + +  G +
Sbjct: 66  GLPYGLALLGGLVIAGLLAWLVGLLTIRLRHDYLAIATFGVAVAFENLVRNAQRLAGGAS 125

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G+   +R                     + Y    +  +L     +   +  L R     
Sbjct: 126 GLRGFERPLADTIPP------------GLAYNAAFFAFVLAALIATYLGLERLIRGPFGR 173

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
             R IR+++ A  +L  +    +L+AF + S  +G+AGA +A     ISP          
Sbjct: 174 LLRAIREDETAARALGKSPDRIRLTAFVIGSVILGLAGALYATFYAFISPQDVLPILTFQ 233

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           + +++I+GG  +         ++ G           +    ++           L+   +
Sbjct: 234 IWAMLIVGGAGNNRGAIAGAFLIWGAWTASGWALSRFAP--IEVQLYTGSIQFVLIGCVI 291

Query: 329 FLVILMRSHSLLRLR 343
             ++L R   L   R
Sbjct: 292 VGMLLWRPQGLFPER 306


>gi|328542037|ref|YP_004302146.1| amino acid or sugar ABC transporter, permease [polymorphum gilvum
           SL003B-26A1]
 gi|326411787|gb|ADZ68850.1| Putative amino acid or sugar ABC transport system, permease protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 412

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 51/368 (13%), Positives = 104/368 (28%), Gaps = 40/368 (10%)

Query: 1   MSIFSLR-LNKYDKILCLLAVVYPL------LLFLFLGATKSQKYIDSMGIQILIYVMFA 53
           M+ F  R L++   +   + +   +      LL           Y  ++  + L Y + A
Sbjct: 1   MTSFLFRALDRRAGLFLAVLLAITIAVPALNLLVPPSSPFHVPTYAVTLMGKYLTYALLA 60

Query: 54  WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113
             + +V G  G+LSL     +A+G Y+  +   R   S  +                 LP
Sbjct: 61  LSVDLVWGYCGILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGDPLLPDFMVFLNWKELP 120

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVAD 154
                 D    A L++  +   +   +                             +  D
Sbjct: 121 WYWHGFDMFWFAALMVLVVPGVLAFVFGWFAFRSRVTGVYLSIITQALTYALLLAFFRND 180

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
             +     +        F          ++        L   +   + R+ +      +R
Sbjct: 181 MGFGGNNGLTDFKDILGFSIQADTTRAGLFAASGIALMLCFLVCRAVTRSKLGKVLVAVR 240

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           D +     L   +   KL  + +S+   G+AGA +      I+P  F  + +I  +  V 
Sbjct: 241 DAESRARFLGYRVEHYKLFVWTLSAMMAGLAGALYVPQVGIINPGEFAPANSIEAVIWVA 300

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +GG  +L         +                    F  +        +     +V L 
Sbjct: 301 VGGRGTLVGPVIGAVAVNFGKTW--------------FTAALPDVWLFALGGLFVVVTLF 346

Query: 335 RSHSLLRL 342
               ++  
Sbjct: 347 LPRGIVGT 354


>gi|283853508|ref|ZP_06370749.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
 gi|283571089|gb|EFC19108.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
          Length = 345

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 69/339 (20%), Positives = 119/339 (35%), Gaps = 7/339 (2%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + +   IL  +  +  L LFL         Y   +   I I ++ A  L+++ G  GL S
Sbjct: 1   MRRGRTILLNVLALAALGLFLAFAEANCDGYQIQILNLIAINIILALSLNLIYGFTGLFS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      AIGAY   IL           + +                +         A  
Sbjct: 61  LGHAGFMAIGAYVCSILIMTPEQKD--TLFILQPAFDWVVAAHAPFLVAVLAGGAVAALF 118

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +   F  + +    +     G     R+        +            I      +  
Sbjct: 119 GVIVGFPLLRLGDDYLGIATLGFAEIIRVVANNIPRLTN----GALGFKGIPSYANLWWN 174

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
            G   ++  +I+ L ++   N  + IRD++ A  ++   +   KL +FAV S F G+ GA
Sbjct: 175 YGFAVITLYVIVRLLQSNTGNVLKAIRDDETASKAMGVDVFRYKLLSFAVGSFFAGVGGA 234

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A+    I P MF F+    V+ IV+ GG+ SLS    A   +  ++E    +      
Sbjct: 235 LIASLLTTIDPKMFLFTLTFNVLMIVVAGGLGSLSGSVLAGIGITVLLEWLRIVENPVDV 294

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                          +  +AL ++IL R   L+ +R  +
Sbjct: 295 LGFSLP-GIPGMRMVVFSLALIVIILFRREGLMGMRELT 332


>gi|186473280|ref|YP_001860622.1| inner-membrane translocator [Burkholderia phymatum STM815]
 gi|184195612|gb|ACC73576.1| inner-membrane translocator [Burkholderia phymatum STM815]
          Length = 633

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 61/284 (21%), Positives = 124/284 (43%), Gaps = 18/284 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+  + ++ILI V+FA  L  ++G  G+ S      + +GAY   +      L +   +
Sbjct: 344 PYMPVLLVEILIAVLFAASLHFIMGPGGMHSFGHAAYFGLGAYGAALFLKVLELPMEAAL 403

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +  +++    ++ G   ++  G YLA+ TL  ++I  +++ +W  +T G  GI      
Sbjct: 404 VLGPVLAILGALLFGWFCVRLSGVYLAMLTLAFAQIVWSVVYQWDDVTGGSNGI------ 457

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                          +PSS++   +  YYV L        ++  +  + +  A R  RD+
Sbjct: 458 ------------LGLWPSSWLSSPVAYYYVTLAFAVPGVWLLRRMLFSPLGYAMRASRDS 505

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                ++       +  AF ++S F G+AG+ +A S+  ISP++   S ++  + +V+LG
Sbjct: 506 ALRAEAIGIDTKRVQWVAFVIASLFCGLAGSLYAFSKGTISPEVISVSRSVDGLVMVLLG 565

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           G+ +L+      A+L  + +       Y+   L        +  
Sbjct: 566 GIQTLTGPVVGAALLTWLQDAVARQTDYWQALLGAAILLLVVAF 609



 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 48/307 (15%), Positives = 102/307 (33%), Gaps = 18/307 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLL 95
           + +         + A GLS++ G   +++      Y +G Y    + SR+    +  WL 
Sbjct: 9   MVNGLADASALFLVAAGLSLIFGVTRIVNFAHGSFYMLGVYVAYTITSRFGATTVGFWLS 68

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  SA+  GA G ++    L+       +  L+ +     I         G   ++    
Sbjct: 69  VIASALTIGALGALVECIVLRRIYKAPELFHLLATFALVLIFRDTALAIWGPQDLFGPRA 128

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
            +  G       +   +  +          +++    +  ++   L  T      R    
Sbjct: 129 PHLAGAVELLGHQLPTYDIA----------LIVIGPLVLLALWYALSHTRWGTLVRAATS 178

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++   +L     +    AF V +   G+ GA                        +V++
Sbjct: 179 DREMLGALGINQAWLFTGAFFVGAFLAGLGGALQGPRMSA--NLSLDLETIGNAFVVVVV 236

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S+     A  ++  +  LC G+      SL     S +        + + +V+++R
Sbjct: 237 GGMGSIPGAFVAALLIAEIKALCIGIGH---VSLFGIGLSLSRFTLVAEFVVMAVVLVVR 293

Query: 336 SHSLLRL 342
              LL  
Sbjct: 294 PWGLLGR 300


>gi|308185587|ref|YP_003929718.1| ABC transport system, permease protein [Pantoea vagans C9-1]
 gi|308056097|gb|ADO08269.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 521

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 87/288 (30%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY+   + S +       +    +++     ++       
Sbjct: 248 ITYGLLGVINMAHGEMLMLGAYATWWVQSLFQQFAPHYLAWYPLLALPVAFMVTAAIGMV 307

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 I   +     + +L  W         + V      L     S +         +
Sbjct: 308 LER--TIIRHLYGRPLETLLATWGISLMLIQLVRVLFGAQNLEVANPSWLSGGLQLLPNL 365

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+L + F+ A   L L RT +    R +  N+              + AF +
Sbjct: 366 VLPWNRIAVILFVVFVLALTWLLLNRTRLGMNVRAVTQNRAMAECCGVPTGRVDMLAFGL 425

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+LGG+  L+    A   L  + ++
Sbjct: 426 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFSLGILNKV 483

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                    L+++ + L I  R   L  ++  
Sbjct: 484 LEPQIGAVLGK-------------ILILVIIVLFIQKRPQGLFAVKGR 518


>gi|210632507|ref|ZP_03297435.1| hypothetical protein COLSTE_01337 [Collinsella stercoris DSM 13279]
 gi|210159602|gb|EEA90573.1| hypothetical protein COLSTE_01337 [Collinsella stercoris DSM 13279]
          Length = 360

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 143/339 (42%), Gaps = 27/339 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  + D +   L ++  ++      A    + I    + I  Y++ A  L++VVG  G L
Sbjct: 8   KKTRSDFLTYALVILAFIVASFLKDAGMIPRMIAGQLVPICAYIVMAISLNLVVGVAGDL 67

Query: 67  SLNCVIAYAIGAYSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           SL      ++GAYS ++             + + + + V A  +   G ++G+P L+  G
Sbjct: 68  SLGHAGFMSVGAYSGIVAAMSLAEAIPNDTVRLVIALIVGAACAALAGFLIGIPVLRLSG 127

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR-----LYFLGTTVRSLIRFFRFPS 174
           DYLAI TL   EI + ++       + +    + +      +  LG +   +        
Sbjct: 128 DYLAIVTLAFGEIIKEVVTCLIVGVDERGLHVLFNLTGKLTVDNLGLSETGVAIIKGAQG 187

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
           +     I  ++    +  ++  I+L L R+    A   +RDN+ A  S+  +    ++ A
Sbjct: 188 ASGTDMISTFFAGFVLVMVALVIVLNLVRSRTGRAILAVRDNRIAAESVGISTTKYRMIA 247

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F VS+A  G AGA F  S  ++S   F F+ +I+++  V+LGG+ ++     A  IL  +
Sbjct: 248 FVVSAALAGAAGALFGNSFSQLSATKFDFNMSILILVFVVLGGLGNMRGSIIAATILTIL 307

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
            E     + Y                  +  I L LV++
Sbjct: 308 PEALRQFSDY---------------RMLVYAIVLILVMI 331


>gi|220924474|ref|YP_002499776.1| urea ABC transporter permease protein UrtB [Methylobacterium
           nodulans ORS 2060]
 gi|219949081|gb|ACL59473.1| urea ABC transporter, permease protein UrtB [Methylobacterium
           nodulans ORS 2060]
          Length = 558

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 93/304 (30%), Gaps = 18/304 (5%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
              + ++ A GL+I  G +G++++       +GAY+  ++       +  L   S  I+ 
Sbjct: 272 LGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQEAIRQRMPGLFDWSLPIAI 331

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
               ++             I   +     + +L  W      +  +              
Sbjct: 332 PLAFLVAGAVGIVIER--GIIRHLYGRPLETLLATWGVSLILQQAVRSLFGPTNREVGAP 389

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           S           +       +++L    +   + L L+ T+     R +  N++   S+ 
Sbjct: 390 SY-MAGAVDVFGLSITWGRLWIVLFALAVFLGLNLILKATSFGLKTRAVTQNRRMAASMG 448

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
               +     F + S   G+AG   A S+          S  I    +V+ GG+ +L   
Sbjct: 449 IRTPWIDAFTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFLVVVFGGVGNLWGT 506

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             A   L    +                          L+++ + L I  R   L  L+ 
Sbjct: 507 LVAALTLGVANKFLEPYAGAVLGK-------------ILLLVFIVLFIQKRPRGLFALKG 553

Query: 345 PSNF 348
            +  
Sbjct: 554 RAVE 557


>gi|313891287|ref|ZP_07824905.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120354|gb|EFR43475.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pseudoporcinus SPIN 20026]
          Length = 317

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 72/337 (21%), Positives = 132/337 (39%), Gaps = 42/337 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K      +        L   +       Y   + + I I ++ A G ++V+G  G   L 
Sbjct: 6   KSLGTWLMTIACLFFTLNFLINGGILGPYHVQILMGIGISIIMAMGTNLVLGFSGQFPLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I  +        ++ + +  +I+G   +I+G P+L+ +GDYLAIATL
Sbjct: 66  QAGFMAIGAYATAIFTNYMPTYLGFYISMLLGVLIAGLLAIIVGFPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++EI + +++    ITNG AG+    R                              V+
Sbjct: 126 GVAEIIRMVIVNGGDITNGAAGLTGILRYSTWP-------------------------VV 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                L A  +L   R++I     ++R+N+ A  S+       K+  F  ++    +AG+
Sbjct: 161 FIFVVLIAVAMLNFLRSSIGRQVISVRENEIAAESMGVNTTKIKVLTFTFAAMTASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            + A    + P  F    +I  + I +LGG+ S++    A  +L  +             
Sbjct: 221 LYVAYIGTVVPKDFTIMRSIDYLIIAVLGGLGSMTGTILAAIVLGVLNMYLQSF------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                    +     +  IAL LV++ +   L+  + 
Sbjct: 275 ---------SDIRMIIYSIALILVMVFKPGGLMGTKE 302


>gi|119387819|ref|YP_918853.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119378394|gb|ABL73157.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 330

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 50/324 (15%), Positives = 110/324 (33%), Gaps = 15/324 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           LA++  L+            +  ++  +  I+ +   GL++ +G  GL+S      + IG
Sbjct: 13  LAILALLVATAIGAHLAGNGFTVTLATKAAIFGLAGVGLNLALGYGGLISFGHAAFFGIG 72

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y   IL S     + +      ++     + +   ++   G    +   +         
Sbjct: 73  GYVTGILASHASTGMPVTSLPFTIMGSNEMLGIWPMAMLAAGLAALVIGALSLRTSGVYF 132

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I            +      + G    S      FP       I  + +   +  ++   
Sbjct: 133 IMVTLAFAQMLYYFAMSWPRYGGEDGLSFYVRNTFPGLNTFAPIQYFAICATLLAVALVF 192

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              + ++    A +  R N +   ++       +L+AF +S   +G+AG+ +A     +S
Sbjct: 193 TAVVTQSRFGLALQAARQNSQRTVAVGIRPYAIRLTAFVLSGMIVGLAGSLYADLNRFVS 252

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P M  +  +  ++  VILGG+  L       A+ I +  +  G++ Y+   L        
Sbjct: 253 PAMMSWHMSGEIMVFVILGGVGRLCGPVAGAALFILLEHVLGGISEYWQALLGLLLL--- 309

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                        ++L     L+ 
Sbjct: 310 ------------AIVLFAPGGLIG 321


>gi|192292609|ref|YP_001993214.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|192286358|gb|ACF02739.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 339

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 69/304 (22%), Positives = 126/304 (41%), Gaps = 30/304 (9%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +I      +LIY +    L+I+ G  G  SL     YA+GAY+  IL   +G++  L +
Sbjct: 45  NFIIFQMTMVLIYAIAVLALNILTGGSGQFSLGQSAFYAVGAYTSAILMENFGVNYALTL 104

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL--IKWKPITNGKAGIYVAD 154
           P+S  +   CG + GLP+L+  G YLA+AT  ++     +L    ++  T G  G+ +  
Sbjct: 105 PISGAVCFICGYLFGLPALRLSGIYLALATFALATAMPQLLKLHYFEHWTGGVQGLVITK 164

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                G  +   +               +YY +L +        + L ++    A   IR
Sbjct: 165 PDAPFGLPMSQDMW--------------LYYFVLVVSMAIYVASVNLLKSRSGRAMMAIR 210

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           DN+ A  ++   +   K  AF +S+   G+AG   A +   ++PD +     I +   ++
Sbjct: 211 DNEIAASAMGVDVARYKTLAFGISAGITGVAGGLGAIAVQFVAPDSYTIQLAIALFLGMV 270

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +GG+  L       A ++ V  +  G +     +              +  + L L+I +
Sbjct: 271 VGGVGWLPGSIVGAAFIVFVPNIAEGFSKGLSGA--------------VFGVILVLIIFL 316

Query: 335 RSHS 338
             H 
Sbjct: 317 LPHG 320


>gi|77462828|ref|YP_352332.1| branched chain amino acid ABC transporter inner membrane protein
           [Rhodobacter sphaeroides 2.4.1]
 gi|126461720|ref|YP_001042834.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
 gi|221638696|ref|YP_002524958.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131]
 gi|332557716|ref|ZP_08412038.1| Inner-membrane translocator [Rhodobacter sphaeroides WS8N]
 gi|77387246|gb|ABA78431.1| ABC branched amino acid transporter family, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|126103384|gb|ABN76062.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
 gi|221159477|gb|ACM00457.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131]
 gi|332275428|gb|EGJ20743.1| Inner-membrane translocator [Rhodobacter sphaeroides WS8N]
          Length = 358

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 77/327 (23%), Positives = 133/327 (40%), Gaps = 15/327 (4%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  ++ F  L    +  + +++ +  LIY + A GL+I+ G  G +SL      A+GAY+
Sbjct: 31  VALVVGFAILPFVINDYWANAVVVPFLIYAIAAIGLNILTGYCGQVSLGTGGFMAVGAYA 90

Query: 81  YV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              ++ +   + I + + ++  I+   G++ GLPSL+ +G YLA+ATL        +  K
Sbjct: 91  VYKLMTAFPDVPILIHVILAGAITAGVGVLFGLPSLRIKGFYLAVATLAAQFFLVWLFNK 150

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                N  A   +                F    +         Y       F  A I  
Sbjct: 151 VPWFYNYSASGQITAP---------ERTMFGIAVTGANTPAWAKYLFCAAFLFALAWIAR 201

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP- 258
            L R  I   W  IRD   A   +    +  KLSAFAVSS FIG+AGA F A     +  
Sbjct: 202 NLTRGTIGRKWMAIRDMDIAAEIIGVNPLTTKLSAFAVSSFFIGIAGALFFAVYLGAAEV 261

Query: 259 -DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            + F   ++ +++ ++I+GG+ S+       A L+ +      +       L        
Sbjct: 262 GEAFGIQKSFLILFMIIIGGLGSIFGSFAGAAFLVLLPVFLKNV---LVGGLGWPSDLAA 318

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRT 344
                ++   +   +++  H L +L  
Sbjct: 319 HIELMIVGALIIGFLILEPHGLAQLWR 345


>gi|282849001|ref|ZP_06258390.1| amino acid or sugar ABC transport system, permease protein
           [Veillonella parvula ATCC 17745]
 gi|282581276|gb|EFB86670.1| amino acid or sugar ABC transport system, permease protein
           [Veillonella parvula ATCC 17745]
          Length = 337

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 121/309 (39%), Gaps = 19/309 (6%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y   + +  +I  +    +   +   G LSL      ++GAY   IL  +  L I 
Sbjct: 3   LLNPYYLQIVMFFIINAIMGISIYFTLA-SGQLSLGAAGFMSVGAYVGAILSLKADLPIV 61

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN--GKAGIY 151
           + I +  +++    +I+GLP+ + +G YLAIATL   E+ + I +         G +GI 
Sbjct: 62  VGIIIGGLVASLVAVIIGLPTTRLKGLYLAIATLGFGEVVRVIFLNLDITNGALGLSGIP 121

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              +          L        +     +    +LL +  L  +  + +  + +  A+ 
Sbjct: 122 SIPQELTNYAYEFDLDGLMGID-AVAWGNLMAIIILLAILVLIIAFCVRINNSRVGRAFA 180

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            I+ +  A   +   +++ K+ AF + +   G+ G  +A   + I+P  F + + + ++ 
Sbjct: 181 AIKADDHAAELMGINVVYYKMMAFIIGAFIAGIGGGLYAHITNFINPTDFSYHKVVQILL 240

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             + GG   +      + IL  + E+   ++ Y                  +    L ++
Sbjct: 241 FPVFGGSNVVWGSVLGSFILTLLPEVLRFLSDY---------------RDIIYGALLVIL 285

Query: 332 ILMRSHSLL 340
           + +R   +L
Sbjct: 286 MAVRPDGIL 294


>gi|163794271|ref|ZP_02188243.1| inner-membrane translocator [alpha proteobacterium BAL199]
 gi|159180439|gb|EDP64960.1| inner-membrane translocator [alpha proteobacterium BAL199]
          Length = 339

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 59/335 (17%), Positives = 126/335 (37%), Gaps = 27/335 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQ-KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           K         +   L++F  L            +G+++LI+V+FA G ++++G  GL S 
Sbjct: 8   KQTTAWITGPIALSLVVFGTLPLWIESIGLYQYLGVEVLIWVIFALGYNLLLGYTGLPSF 67

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                  IGAY++ +       ++W  +  + +++G  G    L     RG Y A+ T+ 
Sbjct: 68  GHGAFLGIGAYAFGLAQFEVWPNLWFCLIAAFVVTGLFGAATALFLSHRRGIYFALMTIA 127

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
             +I+  I  KW  +T+G+ G+    RL                    +     +YY+  
Sbjct: 128 FGQIYYFIASKWTDVTHGEDGLLNIARLPVDL----------GVVELPLAGNAQLYYLCF 177

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  +   ++  L  +      R I+ N+     +   +   K S F +S    G+AGA 
Sbjct: 178 AVYAVLVLLLWRLTNSPYGRVLRAIKQNETRVAFVGYPVGLYKWSVFTLSCGIAGIAGAL 237

Query: 249 FAASRDRISPDMFKFSENIIVISIVIL-GGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
           FA +++    ++     + I++ +V++ GG  S         +     ++       +  
Sbjct: 238 FAMAQEGAYINVMSLQWSGIIVLMVLIGGGFVSFWGPVFGVILYFVARDVLGAYTETW-- 295

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                             +   ++++ +   L  +
Sbjct: 296 -------------LLWFGLMFVVLVIFKPDGLAGM 317


>gi|297567644|ref|YP_003686615.1| hypothetical protein Mesil_3293 [Meiothermus silvanus DSM 9946]
 gi|296852093|gb|ADH65107.1| hypothetical protein Mesil_3293 [Meiothermus silvanus DSM 9946]
          Length = 339

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 59/319 (18%), Positives = 114/319 (35%), Gaps = 9/319 (2%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L   LG     +Y   + I + I V+    L +  G  G+ SL      A+GAY+  IL 
Sbjct: 8   LLAGLGPHFLPEYWVRVLIVLGINVILVSSLGLSNGFTGVFSLGHPGFVALGAYASGILT 67

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
                    L  +   ++G    +  LP+    G   A+   ++      +   +  +  
Sbjct: 68  LELSKKAAYLPDLPGFLAGVQ--LPFLPATLLAGALCALVASLIGIPLMRLSGNYVSVAT 125

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
               + V   L       R    F   P             + G   ++  ++  +  + 
Sbjct: 126 LGFLVIVNVVLVNAERFTRGSRTFTGIP------PYTDLGWVAGWAVVTLLVLSRVAYSP 179

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +  A R  RD+  A  ++   ++ A+L AF + + F G+ GA +       SP  F  + 
Sbjct: 180 LGRAMRATRDDPIAAQAVGIHLLPARLLAFTIGAFFAGVGGALYGHYLVSFSPATFYVAM 239

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
            +  +++++LGG  SL+        +  + E+   +   +    L+    F       + 
Sbjct: 240 LVQQLTMLVLGGQASLTGAVVGVTAITVLSEVLRNLERGFSLGALQVPAVFGASQ-IALG 298

Query: 326 IALFLVILMRSHSLLRLRT 344
               LV++ R   LL    
Sbjct: 299 FIFILVMVYRPQGLLGDWE 317


>gi|163859216|ref|YP_001633514.1| branched chain amino acid ABC transporter permease [Bordetella
           petrii DSM 12804]
 gi|163262944|emb|CAP45247.1| probable branched-chain amino acid transport system, permease
           component [Bordetella petrii]
          Length = 309

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 57/274 (20%), Positives = 114/274 (41%), Gaps = 16/274 (5%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +  +I  +GI+   Y +   GL++  G  G +S+     + + AY   ++      
Sbjct: 19  PVILNDPFITHLGIRAATYAIVVMGLTLFAGYTGQISIGHAAFFGLAAYLSGMMVKAGMP 78

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + + +P++    G  G ++G+  L+  G YLA+A++ ++ I Q I+     IT G +G+
Sbjct: 79  YL-VAVPLATAAVGVLGCLVGMLVLRTSGHYLALASIAVAVIIQVIIKN-SDITGGPSGL 136

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                  F G ++ S               +  YY +L   F    I+  +  +   +A 
Sbjct: 137 TGVPAPEFFGWSLTSD--------------LGYYYYVLLCMFAGFIILQRVIDSRTGDAL 182

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           + I +N+ A  SL   +   K+ +F +S+ F   AG  F      I PD    + +++ +
Sbjct: 183 QAIANNELAAQSLGIPVFRYKVLSFTISTLFAAFAGTLFVHYDGFIDPDRLGLNVSVLFL 242

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            +  +GG+ ++         L  + E       Y
Sbjct: 243 IMTFVGGIGNIYGSVIGAFALTIIEEYAQEFGQY 276


>gi|83954598|ref|ZP_00963309.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83840882|gb|EAP80053.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
          Length = 638

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 100/311 (32%), Gaps = 26/311 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLI 96
                   IY + A GL+I  G +G++++       +GAY+  ++          I + +
Sbjct: 349 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQLFVPDYTLSIIIAL 408

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++  ++ A G++M    +     +  + TL+ +      L +      G     +    
Sbjct: 409 PLAFAVTFAAGVVMERLVI-RHLYHRPLETLLATFGISIALQQLAKNIFGTQARPLTSPA 467

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     +      S  +        + +        I+  L+RT +    R +  N
Sbjct: 468 ---------WLDGAWVISDVIQISYIRIAIFVLALLFLGLILFVLKRTRLGLEVRAVTQN 518

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                S+        +  F + S   G+AG          S     +     +  +V   
Sbjct: 519 PGMAASMGINPDRINMMTFGLGSGIAGIAGVAIGLYAKVTSEMGADYIVQSFMTVVVGG- 577

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
            + ++       +++  +              +  F+ S  +   T MV+ + L I  R 
Sbjct: 578 -VGNVWGTLAGASLIGFLQ-----------KGIEWFNPSNTLAAQTYMVLFIILFIQFRP 625

Query: 337 HSLLRLRTPSN 347
             ++  +  + 
Sbjct: 626 KGIVAQKGRAA 636


>gi|67643840|ref|ZP_00442583.1| HmgE [Burkholderia mallei GB8 horse 4]
 gi|121598924|ref|YP_992280.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein
           [Burkholderia mallei SAVP1]
 gi|167000819|ref|ZP_02266624.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia mallei PRL-20]
 gi|254175786|ref|ZP_04882446.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia mallei ATCC
           10399]
 gi|254202250|ref|ZP_04908613.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia mallei FMH]
 gi|254207583|ref|ZP_04913933.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia mallei JHU]
 gi|121227734|gb|ABM50252.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia mallei SAVP1]
 gi|147746497|gb|EDK53574.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia mallei FMH]
 gi|147751477|gb|EDK58544.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia mallei JHU]
 gi|160696830|gb|EDP86800.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia mallei ATCC
           10399]
 gi|238525280|gb|EEP88708.1| HmgE [Burkholderia mallei GB8 horse 4]
 gi|243063249|gb|EES45435.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia mallei PRL-20]
          Length = 316

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 100/310 (32%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           I +  +   +Y + A G ++V G LG+++        +GA   +   +            
Sbjct: 8   ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAITVLQNHFPELGHV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +  +I+      +G    +     L  A  +   I    +                
Sbjct: 68  ATLTIGLVIAAVVCACVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMMIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    +++    + A ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIKAGENNPGAVISMTEITIIIVAFLVMAGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 AENPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        + L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYISNLTGGVFG-----SNYQDVFAFVVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|260425434|ref|ZP_05779414.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Citreicella sp. SE45]
 gi|260423374|gb|EEX16624.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Citreicella sp. SE45]
          Length = 313

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 72/303 (23%), Positives = 126/303 (41%), Gaps = 24/303 (7%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            S+    L  ++ A GL++V G  G  S      + IGAY+  I+    G  +W+ +P  
Sbjct: 26  LSVMTLTLTNLVLAVGLNLVAGYCGQFSFAQAAFFGIGAYTTAIMSRDLGTGVWINLPAG 85

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +I+G  G+++G+P+L+ +G +LAI T+    +    L++W   T G+ GI V       
Sbjct: 86  IIIAGLFGLVLGVPALRVKGHFLAIVTIAFQTVVYLTLVQWTDFTGGQNGILVPG----- 140

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                            V      Y++ L +  ++  +   L  + +   W  +RD++  
Sbjct: 141 ----VGETSILGIIRFNVQSLDSYYWLTLALAAVAIVVAWRLVHSRLGREWIAVRDDETL 196

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             ++       KLSAF  S+AF G AGA  A +    +PD F    + I+++I+ILGG  
Sbjct: 197 AQAVGVNTTTTKLSAFVASAAFAGAAGALNAYTMRTAAPDDFTIFISSIILAIMILGGKG 256

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           +         IL  + E     + Y                     + L L I      +
Sbjct: 257 TFLGPIVGAFILTIIPESLGEFSRY---------------KMLFFGVLLILTITFLPGGI 301

Query: 340 LRL 342
           ++L
Sbjct: 302 MQL 304


>gi|158424626|ref|YP_001525918.1| ABC transport permease protein [Azorhizobium caulinodans ORS 571]
 gi|158331515|dbj|BAF89000.1| ABC transport permease protein [Azorhizobium caulinodans ORS 571]
          Length = 294

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 64/306 (20%), Positives = 127/306 (41%), Gaps = 18/306 (5%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y+ ++ I   +YV+ A GL++  G  G+++   V  + +GAY+  IL       + + 
Sbjct: 2   DAYLIAIAIIGALYVLLALGLNLQYGLTGIVNFGHVGFFCVGAYTTAILCEHGVPMV-VT 60

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
            P++A+++      +GL S++ R DY AI +L  SE+ + +    + +TNG  GI    +
Sbjct: 61  FPLAALLAMLAAWPLGLVSIRLREDYFAIVSLGFSEVVRLVATSERWLTNGVQGIAGIPK 120

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           ++ + T     +          +  I              + +  + R+        IRD
Sbjct: 121 MFGMLTGTPQALAVLGLLVVLNLIAI--------------AAMWRIVRSPFGRMIEAIRD 166

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N++A  +L       K+    + +   G+AGA +A     I+P+ F       +   +I+
Sbjct: 167 NEEAVKALGKDPAGFKIQVLVLGAGLAGIAGAVYAHYIGFIAPEQFVPLMTFQIWMAIIM 226

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  +S       IL+  +E    +           + S       ++ +AL L  + R
Sbjct: 227 GGVGRISGALVGAVILMFFLEGSRFLRDLL---PFISEVSMASVRLGVVGLALILFTMYR 283

Query: 336 SHSLLR 341
              L+ 
Sbjct: 284 PQGLMG 289


>gi|220916638|ref|YP_002491942.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219954492|gb|ACL64876.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 368

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 69/350 (19%), Positives = 147/350 (42%), Gaps = 19/350 (5%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           +S    R  +   ++ LL  +  +           + Y+  MG+ + + V+     ++V 
Sbjct: 6   LSPLPSRAPRGFSVVGLLVFLAVVAALAVFPQFVKKPYVLHMGVLLFLAVIQGQAWNVVG 65

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G  S+     + +GAY  V+L     ++ W  +  +   S    +++G  + + RG 
Sbjct: 66  GYAGQYSVGHAAYFGVGAYVTVMLLEVNKIAPWWGVWAAMAASVLLSLVIGSITFRLRGP 125

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           Y  +A++ ++EI +   + +K +T G  G  + +           +    R         
Sbjct: 126 YFVLASISVAEIIRLATLYFKDLTRGAEGFLLGEIPTLNLFGNEIMFFGKR--------- 176

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
              Y+V LG+  ++ ++   ++ + +   ++ IR++Q A  SL   + F K  A ++S+A
Sbjct: 177 -PFYFVGLGLAVVAVAVNWIVQHSKLGYYFQAIREDQDAAHSLGINLSFYKNVALSISAA 235

Query: 241 FIGMAGAFFAASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           F  +AG F+A     I P+  F    ++ ++ + I+GG+ ++        +L+ + E+  
Sbjct: 236 FTALAGGFYAMFVKFIDPNTVFGLDVSVQIVLLCIIGGIGTIVGPVIGAVVLVPLSEILR 295

Query: 300 GMNFYYFNSLLKFDCSF--------NMRHTTLMVIALFLVILMRSHSLLR 341
                    +L  D  F        +  H  +  I + LVIL     +L 
Sbjct: 296 NPKGLVQVGVLSPDSGFVTFVERYLSNAHLLVYGILVVLVILFAPEGVLG 345


>gi|83954279|ref|ZP_00962999.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83841316|gb|EAP80486.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
          Length = 402

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 63/349 (18%), Positives = 130/349 (37%), Gaps = 25/349 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           + A +         G  +       +  + +I+ +FA G +I+ G  G LS        +
Sbjct: 20  MAAPIILNPFPAGSGLAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYLSFGHAAFLGV 79

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G+YS V +     +++   I +S +++G   +++G  SL+  G Y +I TL  +++  N+
Sbjct: 80  GSYSAVWMMKLLSMNVIPAILLSVIVAGLFSVVIGFVSLRRSGIYFSILTLAFAQMSFNL 139

Query: 137 LIK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP-----------SSFVIYEIFMY 184
                 PITNG+ G+ +A     +     +      F             ++       Y
Sbjct: 140 AYSVLTPITNGETGLQIALSDPRILDGANAPSYPNLFGAQMNAATTLDFGAWSFTFSVGY 199

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y+   +  L+  I + + R+      R ++ NQ+             L+AF +S  + G+
Sbjct: 200 YLCAVIMLLAFYISIRVFRSPFGMMLRAVKSNQQRMNYTGLNTKPYTLAAFVISGMYAGL 259

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG   AA       +  +++ +  V+ + ILGG  +L         +     +   +N  
Sbjct: 260 AGGLLAAMDPLAGAERMQWTASGEVVLMTILGGAGTLLGPVLGAGFIKYFENIFSKINDN 319

Query: 305 YFNSLLKFDCSFNMRHTTL-------------MVIALFLVILMRSHSLL 340
             +    F          +             + +   LV++     L+
Sbjct: 320 VLHGWFAFMPDGLEDTLIMLIHPFVGKGWHLTLGLLFMLVVIFLPGGLV 368


>gi|27381521|ref|NP_773050.1| ABC transporter ATP-binding/permease protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27354689|dbj|BAC51675.1| ABC transporter ATP-binding/permease protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 577

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 64/334 (19%), Positives = 120/334 (35%), Gaps = 42/334 (12%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             +L FL L      ++         IY + A G+ +  G  G+L L   +  AI AY  
Sbjct: 9   VLILAFLLLIPPFMGEFWAYQLGLYFIYGLAALGVGLAWGQAGILPLGQGMFVAIAAYVT 68

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY-----LAIATLIMSEIFQNI 136
                  G S    + + A       +     +L FRG +      ++ TL ++     +
Sbjct: 69  AHGLLALGSSPIAYLALPAACVLVAVLAFAFAALVFRGRFEQGPSFSLMTLALTLAAFQV 128

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
              W  +T G  G+     L  L   +                   +YY++  +  LS +
Sbjct: 129 ANGWSSVTGGFNGLRNIPGLPGLDGFLD------------------LYYLIAILLGLSIA 170

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            + +L    I   WR   DN++    L   +   K  AFAV+S   G+AGA +A  ++ +
Sbjct: 171 AVDYLVHAPIGVLWRAAADNERRLAFLGYDVAVIKAVAFAVASGLAGLAGALYAPQQNLV 230

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +PD+  F+ +  ++    +GG  ++        ++  +         ++           
Sbjct: 231 TPDLAGFAFSGDLVIFAAVGGRATVLGPVIGAVVVGVLSAELRDRFPWWEIG-------- 282

Query: 317 NMRHTTLMVIALFLVILMRSHSLL----RLRTPS 346
                  + +   +V+L     L+     LR  S
Sbjct: 283 -------IALFFIVVVLRLPGGLMTMLAPLRRFS 309


>gi|86748918|ref|YP_485414.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86571946|gb|ABD06503.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 542

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 91/297 (30%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++      S   L   S +I+     ++ 
Sbjct: 263 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQETIRTSYPALFDYSLLIAVPLAFLVA 322

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                      ++   +     + +L  W      +  +              S      
Sbjct: 323 GAIGVLIER--SVIRFLYGRPLETLLATWGLSLILQQAVRTLFGPTNREVGNPSW-MSGA 379

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++L     +   ++  LR TA+    R +  N++   S+        
Sbjct: 380 FELGQITITYNRLWILCFTLAVFVILLAMLRYTALGLEMRAVTQNRRMAASMGIATSRVD 439

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   A S+          S  I    +V+ GG+ +L         L
Sbjct: 440 ALTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGAFTL 497

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +    +                      +++ + L I  R   L  L+  +  
Sbjct: 498 GIANKFLEPVAGAVLAK-------------IAILVLIILFIQKRPRGLFALKGRAVE 541


>gi|270292332|ref|ZP_06198543.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus sp. M143]
 gi|270278311|gb|EFA24157.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus sp. M143]
          Length = 318

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 80/340 (23%), Positives = 143/340 (42%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + +   L +    L+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNILWLFLLLAGYGLISVLVSAGVLNLFHVQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  S    + +  + + A+ISGA  +++G+P+L+ +GDYLA+ATL
Sbjct: 66  HAGFMAIGAYAAAIIGSKSPTYGAFFGAMLLGALISGAVALLVGIPTLRLKGDYLAVATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +SEI +  +I    +TNG AGI                                    +
Sbjct: 126 GVSEIIRIFIINGGSLTNGAAGILGIPNFTNWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++    L   R+ I  +  ++R+++ A  S+       K+ AF   +    +AG+
Sbjct: 161 YLFVIITTIATLNFLRSPIGRSTLSVREDEIAAESIGVNTTKIKIIAFVFGAITASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F  +I V+ IV+ GG+ S++    +  +L  +  L   +      
Sbjct: 221 LQAGFIGSVVPKDYTFINSINVLIIVVFGGLGSITGTIVSAIVLGILNMLLQDV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  +AL LV++ R   LL     S 
Sbjct: 275 ---------ASVRMIIYALALVLVMIFRPGGLLGTWELSL 305


>gi|121605843|ref|YP_983172.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120594812|gb|ABM38251.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 333

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 57/324 (17%), Positives = 114/324 (35%), Gaps = 22/324 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             V      L L    +  Y   +  ++++Y +FA  L ++VG+ GL+       + IGA
Sbjct: 10  LFVLLAFAGLALYPLMAGNYGIDLVTKMMVYAIFALSLELLVGTTGLICFGQAAFFGIGA 69

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+ V+L ++      L +  + +++ A   +              I   +        ++
Sbjct: 70  YAAVLLPAQTDAPSLLWLLPACVLAAAVYALAVGALSLRTKGAYFIMVTLAFAQMAYYVV 129

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
              P+  G  GIY+  +                         + +Y   L M       +
Sbjct: 130 HDTPLGGGTDGIYLTLKPVLGTLIDLDK-------------PLVLYGFTLLMLAGVFGFL 176

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+    A   IR N++   +   +    KL+AF +S    G+AG  FA     ++P
Sbjct: 177 ALLARSRFGRALAGIRVNEQRMRATGFSTYPYKLAAFVISGGIAGLAGFLFAVKDGFVNP 236

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           +M  +  +  V+ ++ILGG+  L            + E                   F  
Sbjct: 237 EMMSWHLSGAVLIMIILGGLGHLRGALIGAFAFALLQEFFKS---------EAVFGDFAR 287

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                + +++   +++    L+ L
Sbjct: 288 HWHLGLGLSIIASVVLLPRGLVGL 311


>gi|254472941|ref|ZP_05086339.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudovibrio sp. JE062]
 gi|211957662|gb|EEA92864.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudovibrio sp. JE062]
          Length = 358

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 78/327 (23%), Positives = 144/327 (44%), Gaps = 13/327 (3%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L VV    +++      S+    ++ + +LIY + + GL+I+ G  G LSL       +
Sbjct: 27  VLLVVILATMYVIFPMFASEFTYKALLVPVLIYSLASLGLNILTGYAGQLSLGTAGFMGV 86

Query: 77  GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GAY+   I      ++I + + +S   S A G+  GLPSL+ +G YLAIATL        
Sbjct: 87  GAYACYKITTIFPEMNIVIALFLSGFFSAAVGVAFGLPSLRIKGFYLAIATLASQFFLVW 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +  KW  + N                 VR++  F    +      +  YY +LG+  +  
Sbjct: 147 LFEKWAWLYNYN---------ASGAIEVRTMDIFGLVVTGPNASPMVQYYFVLGIVSVVT 197

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254
             ++ L R      W+ +RD   A   +   ++ AKLSAFAVSS  +G+AGA      + 
Sbjct: 198 FAMINLTRGRYGRTWKAVRDMDIAAELVGINLMRAKLSAFAVSSYIVGIAGALMVFFWKG 257

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
              P++F    +  ++ I I+GG+ S+        +++ +  +   +      S+     
Sbjct: 258 AAEPNLFDIPMSFQIVFIAIIGGLGSVMGNFLGAILIVALPVVLNLLPEILGISIGS--A 315

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
           +    +  ++   + + +++  H L R
Sbjct: 316 TMEHVNVMVVGSLIIMFLIVEPHGLAR 342


>gi|300690835|ref|YP_003751830.1| transmembrane abc transporter protein [Ralstonia solanacearum
           PSI07]
 gi|299077895|emb|CBJ50534.1| putative transmembrane abc transporter protein [Ralstonia
           solanacearum PSI07]
          Length = 341

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 60/330 (18%), Positives = 120/330 (36%), Gaps = 27/330 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
                   L       Y+   G Q+LI  +FA  L +V+G  G++SL     + +GAY+ 
Sbjct: 32  IAFWCVPVLVFFILPDYLV-FGSQVLIVGLFALSLDLVLGYAGIVSLGHAGFFGLGAYTA 90

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +L +         +  +A+++   G  +    ++ +     + TL +  +      K  
Sbjct: 91  GLLAAHGWGEPLSGLFAAAVVAALAGFCVSFLVVRGQDLTRLMVTLGIGLMLYEAANKMA 150

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G  G+        LG               F +     Y   L + F    ++  L
Sbjct: 151 FLTGGVDGLSGVTMETLLG------------SFEFDLSGRTAYVYSLAVLFGVFVLLRRL 198

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R+    + R I+       +L   +    ++AF VS+A  G+AG   A +   +  D  
Sbjct: 199 VRSPFGLSLRGIQQGPGRMPALGADVRMRLVAAFTVSAAIAGVAGGLLAQTTQFVGLDAL 258

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            FS +  ++ +++LGG   L       A+ +   ++  G+N               +   
Sbjct: 259 GFSRSAELLIMLVLGGAGRLYGALVGAAVFMLAQDVLAGIN--------------PVYWQ 304

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             + + L +++L     +L     +    R
Sbjct: 305 FWIGLLLMVIVLFARGGILGGLESAVRAWR 334


>gi|194336882|ref|YP_002018676.1| inner-membrane translocator [Pelodictyon phaeoclathratiforme BU-1]
 gi|194309359|gb|ACF44059.1| inner-membrane translocator [Pelodictyon phaeoclathratiforme BU-1]
          Length = 331

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 67/342 (19%), Positives = 130/342 (38%), Gaps = 28/342 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L V+   +  +         Y   + I +L+    +   +++ G  G  S      + 
Sbjct: 4   IALIVILAAIAAVVPLFMGENPYFTGILISVLMMAALSSAWNLLGGYAGQYSFGHAAYFG 63

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            GAY+ +IL + Y L+  L +    +++    +I G    + RG Y A+A++ ++EI + 
Sbjct: 64  AGAYTTMILITLYNLNPVLCMAAGMVVACIIALITGSIVFRLRGHYFALASIAVAEIVRL 123

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            ++ ++  T G  GI ++D                      +  +   YY +L +  +S 
Sbjct: 124 SVLNFE-FTGGAQGILLSDL---------------SLWGLDLNSKNPFYYGMLLVLVVSL 167

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I  +LR++      + IR++Q A  SL   + F K  A  +S+A   + G+ +      
Sbjct: 168 GITAYLRKSKTGFYLQAIREDQDAAASLGINLSFYKNKALLISAALTSVLGSLYGLYIRF 227

Query: 256 ISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC-----------GMNF 303
           I          +I +I   I+GG+ +L        +L+ + E+             G+  
Sbjct: 228 IDTSAVLDLRLSIEIILTAIIGGVGTLWGPVIGAVLLVPLAEMLRSNFIGDALVKAGLVS 287

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                 L    +    H  +  I   L IL     +L L   
Sbjct: 288 ETSGMGLFLKENLAHAHVLVYGIITVLCILYLPKGILGLFRR 329


>gi|53718562|ref|YP_107548.1| putative amino-acid transport permease [Burkholderia pseudomallei
           K96243]
 gi|76809871|ref|YP_332555.1| putative amino-acid transport permease [Burkholderia pseudomallei
           1710b]
 gi|126453328|ref|YP_001065270.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein
           [Burkholderia pseudomallei 1106a]
 gi|134281125|ref|ZP_01767834.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei 305]
 gi|167718473|ref|ZP_02401709.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           DM98]
 gi|167814642|ref|ZP_02446322.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei 91]
 gi|167844673|ref|ZP_02470181.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           B7210]
 gi|167901655|ref|ZP_02488860.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei NCTC
           13177]
 gi|167909905|ref|ZP_02496996.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei 112]
 gi|217420208|ref|ZP_03451714.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei 576]
 gi|237811185|ref|YP_002895636.1| ABC transporter, hydrophobic amino acid uptake transporter
           [Burkholderia pseudomallei MSHR346]
 gi|242316192|ref|ZP_04815208.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           1106b]
 gi|254190868|ref|ZP_04897375.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254196687|ref|ZP_04903111.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei S13]
 gi|254260376|ref|ZP_04951430.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           1710a]
 gi|52208976|emb|CAH34915.1| putative amino-acid transport permease protein [Burkholderia
           pseudomallei K96243]
 gi|76579324|gb|ABA48799.1| putative amino-acid transport permease protein [Burkholderia
           pseudomallei 1710b]
 gi|126226970|gb|ABN90510.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           1106a]
 gi|134247431|gb|EBA47516.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei 305]
 gi|157938543|gb|EDO94213.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|169653430|gb|EDS86123.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei S13]
 gi|217397512|gb|EEC37528.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei 576]
 gi|237505296|gb|ACQ97614.1| ABC transporter, hydrophobic amino acid uptake transporter
           [Burkholderia pseudomallei MSHR346]
 gi|242139431|gb|EES25833.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           1106b]
 gi|254219065|gb|EET08449.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           1710a]
          Length = 316

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 100/310 (32%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           I +  +   +Y + A G ++V G LG+++        +GA   +   +            
Sbjct: 8   ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAITVLQNHFPELGHV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +  +I+      +G    +     L  A  +   I    +                
Sbjct: 68  ATLTIGLVIAAVVCACVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMMIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    +++    + A ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIKAGENNPGAVISMTEITIIIVAFLVMAGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 AENPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        + L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFVVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|217967323|ref|YP_002352829.1| inner-membrane translocator [Dictyoglomus turgidum DSM 6724]
 gi|217336422|gb|ACK42215.1| inner-membrane translocator [Dictyoglomus turgidum DSM 6724]
          Length = 327

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 52/312 (16%), Positives = 109/312 (34%), Gaps = 24/312 (7%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y   + I   I  + A  L+++ G  G  S+      A G Y    L   +G  I  L
Sbjct: 25  NPYFYQILIFWGINSILAMSLNLINGFTGQFSIGHAGFMAAGGYLSAALTIYHGDKIIKL 84

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +                  +      L  A L +      + +K   +     G     R
Sbjct: 85  LS----FMPESISKNIAFFIFLIAGGLFSALLGIIIGIPTLRLKGDYLAIATLGFGEIIR 140

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           +      V              I ++     ++   F+   ++  +  ++   A  +IR+
Sbjct: 141 VIIYNMDVVG-----GARGFPGIPQLTNSVWVMFWAFICFIVLYRMINSSHGRAIISIRE 195

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  ++     + K+ AF++ + F G+AG  F      + P  F F  ++ ++ +++L
Sbjct: 196 DETASEAMGVNTTYYKVLAFSIGAFFAGVAGGLFGHYLMLLHPASFTFMRSVEILLMIVL 255

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ SL+       +L  + E   G                +     +  + L +++L+R
Sbjct: 256 GGLGSLTGSIIGAFVLTVLPEALRGF---------------SSLRLIIYSLTLIVLMLIR 300

Query: 336 SHSLLRLRTPSN 347
              L+  +  S 
Sbjct: 301 PTGLMGNKEISL 312


>gi|121611125|ref|YP_998932.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121555765|gb|ABM59914.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 346

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 120/331 (36%), Gaps = 19/331 (5%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            +    L  ++ L L           Y  ++  + LIY + A  L +V+G   ++S    
Sbjct: 27  RRTWVALVGLFLLALVPTGAEVSGTPYAINLATRFLIYGLAAVSLDLVLGYGAMVSFGHA 86

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           + + +G Y   I+      +  +     +M +     +              +A      
Sbjct: 87  MFFGVGGYVVAIVAHHALEAGPVFGWSGSMQALVVWPLALACCGLLGAAVGYLALRTRGV 146

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            F  I + +  +        +     + G     + +    P   +   +  YY+ LG+ 
Sbjct: 147 QFIMITLAFGQLVY----FVLMSLQVYGGDDGLLMSQRNVVPGLDLDDPVVFYYLCLGLL 202

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                +   +  +      + +R +++   +L       +LSAF +S+   G+AG  +A 
Sbjct: 203 AAWTFLCARVVGSRFGMVLQALRQSERRAVNLGVAPTPYRLSAFVLSAIGTGLAGVLWAN 262

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               ++PDM  ++++  +++IVILGG+ +L       A+ +G+ +       ++      
Sbjct: 263 YAGLVTPDMASWTQSGELMAIVILGGVGTLLGPIAGAAVFLGLEQALAAWTEHW------ 316

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                      +M   L +V+L   + L   
Sbjct: 317 ---------MLVMGPILVIVVLAGRNGLFGR 338


>gi|316932996|ref|YP_004107978.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315600710|gb|ADU43245.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 339

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 69/310 (22%), Positives = 128/310 (41%), Gaps = 30/310 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               ++ +I      +LIY +    L+I+ G  G  SL     YA+GAY+  IL   +G+
Sbjct: 39  APLFAKNFIIFQMTMVLIYAIAVLALNILTGGSGQFSLGQSAFYAVGAYTSAILLENFGV 98

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL--IKWKPITNGKA 148
           +  L +P+S  I   CG + GLP+L+  G YLA+AT  ++     +L    ++  T G  
Sbjct: 99  NYALTLPISGAICFICGYLFGLPALRLSGIYLALATFALATAMPQLLKLHYFEHWTGGVQ 158

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G+ +       G  +   +               +YY +L +  +     + L ++    
Sbjct: 159 GLVITKPDAPFGLPMSQDMW--------------LYYFVLVVSMVIYVASVNLLKSRSGR 204

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           A   IRDN+ A  ++   +   K  AF +S+   G+AG   A +   ++PD +     I 
Sbjct: 205 AMMAIRDNEIAASAMGVDVARYKTLAFGISAGITGVAGGLGAIAVQFVAPDSYTIQLAIA 264

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           +   +++GG+  L       A ++ V  +    +     +              +  + L
Sbjct: 265 LFLGMVVGGVGWLPGSIVGAAFIVFVPNIAEEFSKGLSGA--------------VFGVIL 310

Query: 329 FLVILMRSHS 338
            L+I +  H 
Sbjct: 311 VLIIFLLPHG 320


>gi|294101170|ref|YP_003553028.1| inner-membrane translocator [Aminobacterium colombiense DSM 12261]
 gi|293616150|gb|ADE56304.1| inner-membrane translocator [Aminobacterium colombiense DSM 12261]
          Length = 288

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 65/305 (21%), Positives = 124/305 (40%), Gaps = 40/305 (13%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y + +   + I  + A G+S++ G  G+ SL      A+GAY+  IL   YG+     
Sbjct: 2   SGYTEGIITLLCINAIAAMGVSLLTGFTGIFSLGHAAYMALGAYTSAILTVHYGVHWLPA 61

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           I +   ++      +G+P+L+  GDY AIA++ + E  + IL  W+ +T G  G    + 
Sbjct: 62  ILLGGGVAVIVAYGIGIPTLRLMGDYFAIASIGLGEAIRLILENWQSLTRGARGYPGIEP 121

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
              L                          V L    + A  +  L  +    A++  RD
Sbjct: 122 YTTLP-------------------------VALTFFVIMALCMFNLINSRYGRAFKACRD 156

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   L       ++ +  +S+ + G+AGA  A     I P MF   ++  + ++V+ 
Sbjct: 157 DYVAASLLGFHTARLRVLSLMISAFYCGVAGALLAGFLSFIQPIMFDMLKSTELTAVVVF 216

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S++     T ++  V EL   ++ Y                  +    L +++++R
Sbjct: 217 GGLGSMAGTMVGTLVITLVTELFRPISQY---------------RMLIYGAVLVIIMVIR 261

Query: 336 SHSLL 340
              ++
Sbjct: 262 PEGIM 266


>gi|110669068|ref|YP_658879.1| ABC-type branched-chain amino acid transport system, permease
           protein II [Haloquadratum walsbyi DSM 16790]
 gi|109626815|emb|CAJ53283.1| ABC-type branched-chain amino acid transport system, permease
           protein II [Haloquadratum walsbyi DSM 16790]
          Length = 354

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 59/326 (18%), Positives = 126/326 (38%), Gaps = 38/326 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L V+  ++  L       Q Y  ++  ++ ++ + A    I+ G  G  S   +  + IG
Sbjct: 35  LLVIGTVIGALPPILGLKQGYYMTVISEMFLFAILALSWDIIGGQTGYPSFGNMAFFGIG 94

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL   + + + + +  +A ++    +++G   L+ RG Y AIATL +    Q + 
Sbjct: 95  AYTTAILTKDFSIILPIAMMAAAGVAVGSAVLIGAAVLRLRGHYFAIATLGVLLATQQV- 153

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +   IT G +G  +                               YY    +    A++
Sbjct: 154 SRILDITGGASGKILLQTPS----------------------GTVFYYFFFTVLVAEAAL 191

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           + +L  T        IRD++K   ++     + K +A+ +S+ F G+AG  ++     I+
Sbjct: 192 VYYLSNTRFGFVLNAIRDDEKKATAMGFNTTYYKTAAWVLSAFFTGLAGGGYSLFNTFIN 251

Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P      + N+ +I++ ++GG  +++        L  V+E                  +F
Sbjct: 252 PQTAYNAAWNVELIAMALIGGSGTVTGPIIGAFGLHVVIEYVET--------------AF 297

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
                 L+ + +   ++     +   
Sbjct: 298 VGWQLVLLGLVVIGTVIGFPDGITGT 323


>gi|291296747|ref|YP_003508145.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
 gi|290471706|gb|ADD29125.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
          Length = 356

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 69/324 (21%), Positives = 132/324 (40%), Gaps = 20/324 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +   ++ + +      +Y   +  QILI  +   GL ++VG  G +SL       IGA
Sbjct: 38  FWLAVAIIGVLVLPLLLPQYPLFVTTQILIAALAGLGLHLLVGGAGQISLGQAAFVGIGA 97

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y    L         L I    +++   G+++G+PSL+ +G YLAIATL    +   +  
Sbjct: 98  YVSSHLSGDLA---PLGILAGGLVAALIGIVLGIPSLRIKGAYLAIATLAFQFLADYVFK 154

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +W   T G AG  +                   F    +  +  +YY+ L          
Sbjct: 155 RWTAFTGGVAGRSLPAEGT--------------FLGLPLADDRVVYYLGLVFAIPMFFYA 200

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L  T    AW  +RDN  +       ++ +KL+AFA+S+ + G+AG         ++P
Sbjct: 201 KRLLSTRAGRAWFAVRDNDLSAQLSGVDLVRSKLTAFALSAFYGGIAGGILMHLIGAVTP 260

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F  + +I  ++IVI+GG  ++         ++ + E+   +   +    +      + 
Sbjct: 261 ENFVLAFSIQYLAIVIVGGAGTVLGAVLGALFIVLIPEILSVIAGAFGPQYVA---QLSA 317

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
             +    + + L +++    L+ L
Sbjct: 318 WRSVAFGVLILLFLILEPRGLVGL 341


>gi|163792681|ref|ZP_02186658.1| ABC transporter permease protein [alpha proteobacterium BAL199]
 gi|159182386|gb|EDP66895.1| ABC transporter permease protein [alpha proteobacterium BAL199]
          Length = 345

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 77/326 (23%), Positives = 126/326 (38%), Gaps = 30/326 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A     +L   +       +       +L Y +   GL+I+ G  G  SL     +AIGA
Sbjct: 29  AATAIAILVAVVLPWTLGSFQTFQITLVLFYAIAILGLNILTGFNGQFSLGHSAFFAIGA 88

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL- 137
           Y+  IL  RYG+S +L IPV+  +  A G + G P+L+  G YLA+AT  +S     +L 
Sbjct: 89  YTTAILVERYGVSTYLTIPVAGGLGFAAGFLFGFPALRLSGLYLALATFALSVATPQLLK 148

Query: 138 -IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
              ++  T G  GI +                +              YYV L +   +  
Sbjct: 149 YNHFEDFTGGVQGINLLKDSAPFDLPFSVDQWW--------------YYVTLAITLFAFW 194

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +   L  +    A   IRDN  A  ++       K   F VS+    +AGA  A   + +
Sbjct: 195 MARNLINSRTGRAIMAIRDNPIAAATMGVNTALYKTLTFGVSALLTAVAGALSAIVVEYV 254

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +PD F F  ++  +  +++GG+  +       A ++ V  L  G++              
Sbjct: 255 APDSFTFVLSVYFLIGLVIGGVGWIPGAVIGGAFVLYVPNLAEGISTGLAG--------- 305

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
                 L  + + LVI +       L
Sbjct: 306 -----VLFGVIILLVIYLMPSGAAGL 326


>gi|83949675|ref|ZP_00958408.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
 gi|83837574|gb|EAP76870.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
          Length = 409

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 56/371 (15%), Positives = 127/371 (34%), Gaps = 39/371 (10%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGAT----KSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            +   I+  + ++ P +L  F   T            +  + +I+ +   G +I+ G  G
Sbjct: 9   TRLFLIVAAMTLLAPFILNPFPEGTAMAQMFNAGYPDLMQRFVIFGILVIGFNILFGLTG 68

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            LS        +G+Y+ V +    G+++   I +S +++G   +++G  SL+  G Y +I
Sbjct: 69  YLSFGHAAFLGVGSYAAVWMFKLVGMNVVPAILLSMVVAGLFALLIGYVSLRRSGIYFSI 128

Query: 125 ATLIMSEIFQNILIKWKPIT----------------------NGKAGIYVADRLYFLGTT 162
            TL  +++  N+                               G++              
Sbjct: 129 LTLAFAQMSYNLAYSVLGNPASNFNLTNGETGLQLLLDDPRVLGESVTADGSIPVTNFFG 188

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +     F      ++      YY+   +  +S  I + + R+      R ++ NQ+    
Sbjct: 189 IAMRDSFNLEIGGWLFTFNAGYYLAGIIMLISFYISIRIFRSPFGMMLRAVKSNQQRMNY 248

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
              +     L+AF +S  + G+AG   ++       +   ++ +  ++ + ILGG+ +L 
Sbjct: 249 TGLSSRPYTLAAFVISGIYAGLAGGLLSSMDPLAGAERMHWTASGEIVIMAILGGVGTLI 308

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALF 329
                         +   +N    +  L F                        + +   
Sbjct: 309 GPILGAGFNEYFKNILSKINDEVLHQWLSFMPDGLENAFVGVLHFFVGKGWHLSLGLLFM 368

Query: 330 LVILMRSHSLL 340
           +VI+     L+
Sbjct: 369 MVIIFLPGGLV 379


>gi|126440035|ref|YP_001058034.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein
           [Burkholderia pseudomallei 668]
 gi|167737523|ref|ZP_02410297.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei 14]
 gi|167823110|ref|ZP_02454581.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei 9]
 gi|167893202|ref|ZP_02480604.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           7894]
 gi|167917927|ref|ZP_02505018.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           BCC215]
 gi|226194536|ref|ZP_03790134.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|254181480|ref|ZP_04888077.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           1655]
 gi|126219528|gb|ABN83034.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei 668]
 gi|184212018|gb|EDU09061.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           1655]
 gi|225933621|gb|EEH29610.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia pseudomallei
           Pakistan 9]
          Length = 316

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 100/310 (32%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           I +  +   +Y + A G ++V G LG+++        +GA   +   +            
Sbjct: 8   ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAITVLQNHFPELGHV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +  +I+      +G    +     L  A  +   I    +                
Sbjct: 68  ATLTIGLLIAAVVCACVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMMIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    +++    + A ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIKAGENNPGAVISMTEITIIIVAFLVMAGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 AENPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        + L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFVVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|332286072|ref|YP_004417983.1| putative branched-chain amino acid transport system permease
           protein [Pusillimonas sp. T7-7]
 gi|330430025|gb|AEC21359.1| putative branched-chain amino acid transport system permease
           protein [Pusillimonas sp. T7-7]
          Length = 309

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 67/319 (21%), Positives = 122/319 (38%), Gaps = 31/319 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  +   + +    +  ++  MGI+     +   GL++ +G  G +SL     + + AY 
Sbjct: 9   LAAIAALVLVPLILNDPFLTHMGIRATTAAIVVMGLTLFIGYTGQISLGHAAFFGLAAYI 68

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             IL           + ++ +  G  G I+GL  L+  G YLA+A++ +  I Q ++   
Sbjct: 69  SGILMKSGFP-FLGSVAIATISVGILGCIVGLIVLRTSGHYLALASIAVGVILQTLVKN- 126

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             IT G +G+         G T+ S +                YY++L    +   I+  
Sbjct: 127 SSITGGPSGLTAVPSPSLFGWTLNSDLM--------------YYYMVLLCMVVGFIILRR 172

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +  +   +A R+I +N+ A  SL   +   K+ +F VS+ F   AG  F      I PD 
Sbjct: 173 ITDSRTGDALRSIANNELAAQSLGIPVFKYKVLSFTVSTMFAAFAGTLFVHYDGFIDPDR 232

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
                +I    +  +GG+ +L         +  + E   G   Y                
Sbjct: 233 MGLPISIFFFVMAFIGGIGNLYGSIIGAFAITILEEYAQGFGNYNV-------------- 278

Query: 321 TTLMVIALFLVILMRSHSL 339
             +  + L +VIL     L
Sbjct: 279 -LVYGLLLAIVILFLPKGL 296


>gi|284044243|ref|YP_003394583.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283948464|gb|ADB51208.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 350

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 54/331 (16%), Positives = 111/331 (33%), Gaps = 19/331 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  L  +  L++   +  +     +D +    L+ ++   GL I VG+ G+ S   V   
Sbjct: 9   LPTLIALVALVVLATVVGSTGGPAMDRVVTVALMNLVLVVGLWIFVGNSGVFSFGHVGFA 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AIGAY+  +L         L+  + ++I+                  L    L       
Sbjct: 69  AIGAYAGGLLTIPPEQKPLLIEGIPSVIAELHASAPVAVLAGGLLAALVALVLSFP---- 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY-VLLGMCFL 193
                   +    A + +   L  +   + +  +                    L     
Sbjct: 125 -----LMRLNGLAAAMSLFAVLVIVNVVLSNWNQLTNGTGGISGIPATTTTGTALVWAIA 179

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           + +I    ++T  +   R  R+++ A  +    ++  + +AF +S+   G+AGA +    
Sbjct: 180 AIAIAFVFQQTRWALRLRATREDEPAARAAGIGVLTERSAAFVLSAFVAGVAGALYGQFL 239

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             I+P  F  S     + ++++GGM SLS        +    EL                
Sbjct: 240 GSITPGAFYLSLTFTTMVMLVVGGMRSLSGAVLGAIAMSFAAELLRQFGASVGK------ 293

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                     + + +  ++++R   LL  R 
Sbjct: 294 ---PSLRDLGLALIMVAILVIRPQGLLGERE 321


>gi|119946609|ref|YP_944289.1| ABC transporter inner-membrane translocator [Psychromonas
           ingrahamii 37]
 gi|119865213|gb|ABM04690.1| ABC transporter inner-membrane translocator [Psychromonas
           ingrahamii 37]
          Length = 390

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 51/348 (14%), Positives = 102/348 (29%), Gaps = 33/348 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
            +  L V    L F          Y  S+  + L Y + A  + +V G  G+LSL     
Sbjct: 24  FITTLYVTVCNLAFAPGSFFYVSNYTVSLLGKYLCYALLALAVDLVWGYCGILSLGHGAF 83

Query: 74  YAIGAYSYVILGSRYG-----------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           +A+G Y+  +   R                 + +  + +     G    L  +       
Sbjct: 84  FALGGYAMGMYLMRQIGDRGVYGNPDLPDFMVFLNWTELPWYWAGSDNVLFMVLLVFAGP 143

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPS 174
            +   I   +     +    ++     +  A  L F    +              F F  
Sbjct: 144 GLLAYIFGTMAFRSRVSGVYLSIITQAMTYALMLSFFRNEMGFGGNNGLTDFKEIFGFSL 203

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                ++ ++           ++  ++  + +      IRD +     +       K+  
Sbjct: 204 QSPDTKLALFVATAVALAFGYAVSHFIVNSKMGRVVTAIRDAEDRVRFVGYKPQHYKVWI 263

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F VS+   G+AGA +      I+P  F    +I ++  V +GG  +L        ++   
Sbjct: 264 FVVSAMLAGLAGALYVPQVGMINPGEFSPLNSIEIVIWVAIGGRGTLYGAIIGAVVVSYA 323

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                           +F           +     LV L+    +  L
Sbjct: 324 KT--------------RFTAIMPEVWLFGLGGLFVLVTLLLPKGIAGL 357


>gi|149203677|ref|ZP_01880646.1| inner-membrane translocator [Roseovarius sp. TM1035]
 gi|149142794|gb|EDM30836.1| inner-membrane translocator [Roseovarius sp. TM1035]
          Length = 327

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 58/328 (17%), Positives = 110/328 (33%), Gaps = 15/328 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L   A++  LLLF        + ++ ++  + +I  +   GL+I +G  GL+S    + +
Sbjct: 6   LLNAALMAILLLFPLYAWATDEPFLITLTTRAVILAIAGVGLNIALGFGGLVSFGHALFF 65

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G Y+  IL         +      +       ++ + +             +      
Sbjct: 66  GLGGYAMGILAYHAQTYTSVTDWPLTIPGTKSMPVIWIIATLTSALAALAVGALSLRTTG 125

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              I      +     +      + G    S+     FP    +  I  + +  G+  L 
Sbjct: 126 VYFIMITLAFSQMFYYFAISWPAYGGEDGLSIYVRNGFPGLNTMDPIQFFALCYGLLALI 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L R+         R N+    ++        L AF +S A  G+AGA FA    
Sbjct: 186 LFFTARLARSPFGLMLGAARQNEARVAAIGQRPYRLYLIAFTLSGAITGLAGALFADLNR 245

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            +SP MF +  +  ++  VILGG+  +       A+ I +     G++ Y+         
Sbjct: 246 FVSPVMFSWQTSGEIMVFVILGGVGRVFGPVAGAALFILLEHSLGGLSDYWH-------- 297

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
                    +   L   +L     L  L
Sbjct: 298 -------IYLGAILLGTVLFARGGLFGL 318


>gi|148508167|gb|ABQ75958.1| ABC-type branched-chain amino acid transport system, permease
           protein II [uncultured haloarchaeon]
          Length = 354

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 59/326 (18%), Positives = 126/326 (38%), Gaps = 38/326 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L V+  ++  L       Q Y  ++  ++ ++ + A    I+ G  G  S   +  + IG
Sbjct: 35  LLVIGTVIGALPPILGLKQGYYMTVISEMFLFAILALSWDIIGGQTGYPSFGNMAFFGIG 94

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL   + + + + +  +A ++    +++G   L+ RG Y AIATL +    Q + 
Sbjct: 95  AYTTAILTKDFSIILPIAMMAAAGVAVGSAVLIGAAVLRLRGHYFAIATLGVLLATQQV- 153

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +   IT G +G  +                               YY    +    A++
Sbjct: 154 SRILDITGGASGKILLQTPS----------------------GTVFYYFFFTVLVAEAAL 191

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           + +L  T        IRD++K   ++     + K +A+ +S+ F G+AG  ++     I+
Sbjct: 192 VYYLSNTRFGFVLNAIRDDEKKATAMGFNTTYYKTAAWVLSAFFTGLAGGGYSLFNTFIN 251

Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P      + N+ +I++ ++GG  +++        L  V+E                  +F
Sbjct: 252 PQTAYNAAWNVELIAMALIGGSGTVTGPIIGAFGLHVVIEYVET--------------AF 297

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
                 L+ + +   ++     +   
Sbjct: 298 VGWQLVLLGLVVIGTVIGFPDGITGT 323


>gi|288920918|ref|ZP_06415213.1| inner-membrane translocator [Frankia sp. EUN1f]
 gi|288347679|gb|EFC81961.1| inner-membrane translocator [Frankia sp. EUN1f]
          Length = 403

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 69/333 (20%), Positives = 128/333 (38%), Gaps = 10/333 (3%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L     +    + ++    G  +   V+ A GL+++ G+ G LSL      A+GA SY
Sbjct: 22  VALFAIAVVIPFYADEFWLRTGFAVFAAVIGAVGLNLLSGTTGQLSLGHAFFLAVGAISY 81

Query: 82  VILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
             L                L + ++  +SG  G++    + + RG YLAIA+L +    Q
Sbjct: 82  SFLSGEGSGGISGLGLPPLLAMIIAVAVSGLAGLLFSPVAARVRGLYLAIASLGLVVAGQ 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           +IL    P+T G  G          G +                    ++Y+ L +  LS
Sbjct: 142 HILNTATPLTGGFNGRS-VPDFSLPGFSFSDSDPDLTVLGVPFGQAERLWYLGLLLAALS 200

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L R     A   +RDN  A       +   +  AF +SS + G++G  +A S  
Sbjct: 201 IIFANNLLRGRSGVALEAVRDNPLAAAVNGVDVAAYRARAFLLSSMYAGLSGVLYALSVG 260

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--YYFNSLLKF 312
            ++P+ F    ++  + +++LGG+ S+   A   A +  +  +    +    + ++    
Sbjct: 261 SVAPESFTIEVSVQYLVMIVLGGLGSMGGAAAGAAFVTALPLVLQQYSDSLPFLSAPGSG 320

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
             S+          A+ L++L+       L   
Sbjct: 321 GVSYADAARFAYGAAVVLIVLVEPTGAAGLARR 353


>gi|282898417|ref|ZP_06306408.1| inner-membrane translocator [Raphidiopsis brookii D9]
 gi|281196948|gb|EFA71853.1| inner-membrane translocator [Raphidiopsis brookii D9]
          Length = 381

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 53/347 (15%), Positives = 102/347 (29%), Gaps = 27/347 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             K   ++ +  V+   LL L +      ++  ++  + L   +   GL ++ G  GLLS
Sbjct: 12  QAKKSILVEIAVVMAIALLLLVIMPLVLTEFRLNLLGRFLSLAIVGLGLDLIWGYTGLLS 71

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L   I + +G Y+  +       S  L   +                         I   
Sbjct: 72  LGHGIFFGLGGYAIAMYLKLQVPSGELPDFMGLYGVTELPWFWHPFYSFGFAVIAVILIP 131

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF-------------RFPS 174
            +       L+    I      I     +           + F                 
Sbjct: 132 GLLAGVLGYLVFRNRIKGVYFSILTQAAVIIFFNFFNGQQKLFNGTNGLTAFKTLLGVSL 191

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
           +    ++ +Y + +    L+  +  WL           IRD++             K+  
Sbjct: 192 NDRGMQLVLYSLTIVFLILTYGLFRWLTSGRFGRLLMAIRDDETRVRFCGYDPTEYKVLV 251

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           FAVS A  G+AGAF+A     +SP       +I ++  V +GG  +L+     T ++   
Sbjct: 252 FAVSGAIAGIAGAFYAIQSGSVSPRAMDIGFSIEMVIWVAVGGRGTLTGAILGTLLVNYA 311

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                                F             +V+ +    ++ 
Sbjct: 312 RTFLSE--------------QFAEIWLFFQGALFLVVVTVLPDGMMG 344


>gi|254489249|ref|ZP_05102453.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. GAI101]
 gi|214042257|gb|EEB82896.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. GAI101]
          Length = 822

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 53/265 (20%), Positives = 108/265 (40%), Gaps = 18/265 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V   L+ L L       +   +   I+I+ +FA  L  ++G  GL+S      +  GA
Sbjct: 313 LLVAFGLVILGLLPLYGSNFSVVLVTDIMIFCLFAASLHFMLGQGGLVSFGHAAFFGGGA 372

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +  +     + L + ++ + +G   +++G   L+  G Y A+ TL   ++  ++  
Sbjct: 373 YAAALFVTYADTPMELALILAPLCAGLAAIVIGWVCLRSTGVYFAMLTLAFGQLLWSLAF 432

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +W  +T G  G+                     +PS++       YY+   +C     ++
Sbjct: 433 QWGDVTGGDDGLVNI------------------WPSAWASDNSVYYYIAFILCVGGILLL 474

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
                     A R  RD+ +   ++       +  AF  +    G+AG  F  S+  I P
Sbjct: 475 RQAAHAPFGYAMRAARDSARQAEAMGINTKHIQWVAFTFAGTMAGLAGGLFVFSKGSIFP 534

Query: 259 DMFKFSENIIVISIVILGGMTSLSK 283
           +  + + +   + +V LGG+ +LS 
Sbjct: 535 NELETARSFDALIVVFLGGVKTLSG 559



 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 99/308 (32%), Gaps = 28/308 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96
           I +         M A GLS++ G   +++      Y +GAY     +      +  W  I
Sbjct: 8   ILTGLANAGALFMVASGLSLIFGVTRIVNFAHGSFYMLGAYVGYSLMQVLPGVVGFWGAI 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ +I G  G+I+ +  L+       +  L+ +     ++     +  G   +      
Sbjct: 68  LLAGLIVGLIGVIVEVCVLRPVYSAPELFQLVATFGVILVIQDLALMIWGPQDLLGPRAP 127

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G                     +   +++   F++ ++   + RT +    R    +
Sbjct: 128 GLKGV----------IRIMGEPVPQYDIALIIITPFVALALWYLITRTRVGVLVRAATQD 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +L     +     F +  A  G+ GA            +  F+    V  +V++G
Sbjct: 178 REMVSALGVNQAWLFTGVFFLGCALAGLGGALQLPKGGA--DLLMDFTILGAVFVVVVIG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM SL     A  I+  +                            LM + + +V++ R 
Sbjct: 236 GMGSLPGAYLAAVIISVLNVFGVTYA--------------PQSTLVLMFLVMIVVLMFRP 281

Query: 337 HSLLRLRT 344
             LL    
Sbjct: 282 FGLLGKEE 289


>gi|239906903|ref|YP_002953644.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
 gi|239796769|dbj|BAH75758.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
          Length = 335

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 61/323 (18%), Positives = 121/323 (37%), Gaps = 19/323 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +    L    L    +      + I +  Y       ++V G  G+L L   +   IG
Sbjct: 9   ILLAVVALAAFGLPLVVTSPTYLQILILLFFYAYLTTAWNLVGGFAGVLPLGHSVFVGIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL  +YG+S W+ + V   I+   G+I+GLP+ + RG Y  + T+  +E  + ++
Sbjct: 69  AYTSSILTLQYGVSPWIGMLVGGAIAAVIGVIIGLPTFRMRGAYFCLCTIAFAEGIRVMV 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                +     G    +    L   +     F+ +     + ++  YY++L +  L  + 
Sbjct: 129 ENIDTL-----GPLKINGPRGLLVPLLKDPTFWDYQF---MSKLPYYYIILVLLILVLAF 180

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRI 256
             ++ R+ I        +   A  +L   +   KL A A+S     +AG F+A       
Sbjct: 181 TWFVSRSKIGYYLAAGGEEPDAAAALGINVANYKLFAMALSCFLTALAGTFYAQLMLYFY 240

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
              +     +  +  I ++GG  +++       +L  + E                    
Sbjct: 241 PKGLMGLDLSFEIAFIALIGGRGTIAGPVIGALLLRPLNEFTRIYLSDMLPG-------- 292

Query: 317 NMRHTTLMVIALFLVILMRSHSL 339
              H  +  + L LV++     L
Sbjct: 293 --LHLVIFGLILILVMIYLPKGL 313


>gi|83647208|ref|YP_435643.1| branched chain amino acid ABC transporter permease [Hahella
           chejuensis KCTC 2396]
 gi|83635251|gb|ABC31218.1| Branched-chain amino acid ABC-type transport system, permease
           components [Hahella chejuensis KCTC 2396]
          Length = 559

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 93/306 (30%), Gaps = 21/306 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++ A GL+I  G +G++++       +GAY+  ++       I   + V+   
Sbjct: 274 ISLGAVLLLAAVGLAITFGVMGVINMAHGEMIMLGAYTTFVIQQWMPNHIEYSLFVAIPA 333

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     + G+   +    +L    L        I +  + +                  T
Sbjct: 334 AFLVSGLAGVLIERGVIRFLYGRPLETLLATFGISLCLQQLVR------TIFGSLNQSVT 387

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             + +      +  +       Y+++    +  ++   LR+T        +  N+    S
Sbjct: 388 TPNWMSGSIEINGALSLTYNRLYIIIFSILVLLALAALLRKTQFGLQMPAVTQNRPMASS 447

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +     +     F + S   G+AG   +   +         +  I    +V+ GG+ +L 
Sbjct: 448 MGIRTGWLDAMTFGLGSGIAGIAGVALSQLTNV--GPNLGQAYIIDSFMVVVFGGVGNLM 505

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   L    +L                         L+++ + L I      +  L
Sbjct: 506 GTFVGAMSLGVANKLLEPFAGAVLAK-------------ILVLVFIILFIQKYPRGMFAL 552

Query: 343 RTPSNF 348
           +  +  
Sbjct: 553 KGRAVE 558


>gi|154244841|ref|YP_001415799.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154158926|gb|ABS66142.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 320

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 73/322 (22%), Positives = 137/322 (42%), Gaps = 30/322 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++    L + +       +   +   + I+ + A GL+I++G  G +SL       IGAY
Sbjct: 18  LIVLAALMVLVPVLAPSSFHLRVAALVWIFALAALGLTILMGYAGQVSLGHAGFVGIGAY 77

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  I  +R GL   L + + A+++G     +G P LK +G YLAIATL    I   +L  
Sbjct: 78  AVAIGPARLGLDPLLCLVLGAVLAGMIAYGVGRPILKLKGYYLAIATLGFGVIVALVLHS 137

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              IT G  G+ V+    F                  V   +  Y+V  G   + A + L
Sbjct: 138 EAEITGGPDGMAVSRLSLFGWR---------------VSGALNWYWVTSGALLIGALLAL 182

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +    A R + D++ A       +   KL+AF V++ +  +AG   AA    I+P+
Sbjct: 183 NIAASPTGRALRALHDSEVAAAGAGIDVGAKKLAAFVVAAVYGAVAGGLLAAMNGLITPE 242

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
              FS +I ++++VI+GG+ S+       A L+ + ++   +  Y               
Sbjct: 243 AASFSHSIELVAMVIIGGLGSVFGTVVGAAFLVVLPQMLTALQEY--------------- 287

Query: 320 HTTLMVIALFLVILMRSHSLLR 341
              ++ + + + ++     ++ 
Sbjct: 288 EQAVLGLLIMVFMIFLPQGIVP 309


>gi|300783305|ref|YP_003763596.1| branched-chain amino acid ABC transporter permease [Amycolatopsis
           mediterranei U32]
 gi|299792819|gb|ADJ43194.1| permease component of ABC-type branched-chain amino acid transport
           system [Amycolatopsis mediterranei U32]
          Length = 356

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 64/338 (18%), Positives = 127/338 (37%), Gaps = 19/338 (5%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
             R      +L         L  + L    + ++ +     I  Y++   GL+++ G  G
Sbjct: 15  PKRRRTPPPLLVHALAALGALAVIVLLTLVTDEFTNLRIATIGYYLIAVAGLTLLTGLTG 74

Query: 65  LLSLNCVIAYAIGAYSYVILGSR-YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
            +SL       IGAY+  +L  R     +W  + +++   G  G++ G  + + RG YLA
Sbjct: 75  QVSLGHGAFMFIGAYTVALLVRRVPTFPLWADLLLASAAGGLAGLLAGAAAARLRGPYLA 134

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
            ATL ++     +  K+     G  G               S     R   + V    + 
Sbjct: 135 GATLALAVGLPALTRKFPDFLGGSNG--------------LSFTVHSRRAGAGVPELRWQ 180

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
            +++     L+  +++ + R  +   +R +RD++ A       +   K+ AF VS+   G
Sbjct: 181 TWIVWLSVLLALVLVVNIVRGRLGRNFRAVRDDEVAAALSGIAVGRTKILAFLVSAVCGG 240

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           +AG   A      +P  F  + ++ +++ V+LGG+ SL         L+        +  
Sbjct: 241 LAGGLQAFLLGTAAPGSFTPALSLSLLAAVVLGGLGSLWGALWGAVALVYFQAWSEDLAD 300

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
               +        N     +  + L +V+L     +  
Sbjct: 301 ALHLN----TDVANNLPLAVYGVILIVVVLAFPRGIQG 334


>gi|293602476|ref|ZP_06684922.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292819238|gb|EFF78273.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 365

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 76/333 (22%), Positives = 142/333 (42%), Gaps = 31/333 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +       LA+   L +   + A     Y   +   + +  +   GL++++G  G +S  
Sbjct: 4   RLASRWLPLALYALLAVAALVLAATVNGYYVFVLGNVALLALAGIGLNVLLGLTGQMSFG 63

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
               YAIGAY+  IL  + G S WL  P +A+++GA G+++ LP+L+ +G YLA+ T+  
Sbjct: 64  HAGFYAIGAYTVAILTGQAGWSFWLAWPAAAVVAGAFGLLLALPALRVKGPYLAMITIAF 123

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
             I ++ LI+   +T G+ G+    +                   + +  +  +  + + 
Sbjct: 124 GFIVEHALIEGGDVTGGQNGLMGIVQPS----------------LAGIGGDRGVAMLAIV 167

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
             F++ +    L R     A R ++D++ A  S+    +  K  AF VS+A +G+AG  +
Sbjct: 168 AVFVALAAYALLSRGTWGAAMRAVKDSETASESIGINPLMVKTVAFMVSAAVVGLAGGLY 227

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A     I+P  F F ++I+ +  V LGG  SL+       ++  + EL   +  Y     
Sbjct: 228 APQAGMITPHNFNFMQSILFVLAVTLGGAGSLAGPLLGAVVVGLLPELLSSLEEY----- 282

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                             L +V+      +  L
Sbjct: 283 ----------RLLFFGAFLLVVLWAAPDGVAGL 305


>gi|167031679|ref|YP_001666910.1| inner-membrane translocator [Pseudomonas putida GB-1]
 gi|166858167|gb|ABY96574.1| inner-membrane translocator [Pseudomonas putida GB-1]
          Length = 339

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 112/301 (37%), Gaps = 24/301 (7%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++  +ILI+ + A   ++++G  GLLS    I + +GAY   +L       ++  +  +A
Sbjct: 36  TLATEILIFALAALACNLLLGYTGLLSFGQGIFFGVGAYGAALLMIHLHWGMFAALLGAA 95

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +      +++G  +++  G Y  + TL  S++   +       T G  G+    R     
Sbjct: 96  VFGAFLALLVGALAIRRTGIYFVMLTLAFSQMAYFLAYTLSGWTGGDNGLLDVPRP---- 151

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                 I         +      Y  + G+  L  +  L + R+   +    IR+N+   
Sbjct: 152 -----NIEIAGHVLVDLADPRHFYVFVAGLFLLIFAAALRVIRSPFGSTLLAIRENETRA 206

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++       K+  F +S A  G+AGA +A               +  ++ + I+GG  S
Sbjct: 207 AAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENILIMTIVGGTGS 266

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L         ++ + ++   +   +                 L+ + L LV++     L 
Sbjct: 267 LFGSLLGAGAIVLLGDVLSELWPRW---------------LMLLGVILILVVVFMRGGLW 311

Query: 341 R 341
            
Sbjct: 312 G 312


>gi|121535363|ref|ZP_01667175.1| inner-membrane translocator [Thermosinus carboxydivorans Nor1]
 gi|121306055|gb|EAX46985.1| inner-membrane translocator [Thermosinus carboxydivorans Nor1]
          Length = 325

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 75/350 (21%), Positives = 138/350 (39%), Gaps = 42/350 (12%)

Query: 1   MSIFSLRLNKYDKILCLLA-VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIV 59
           M+I  +   +   ++ L A +     +   +       +     I I I ++ A  L+++
Sbjct: 1   MTILGMNAKRKTDLVSLAACLGLYAAVQAMIEFDIIGSFWLLNIILICINIILAVSLNLI 60

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
            G  G  S+      A+GAY   +L  ++ +   L I   A+ +G  G ++GLP+L+  G
Sbjct: 61  NGFTGQFSIGHAGFMAVGAYLSAVLTVKFQVPFILAILAGAVAAGVLGFVIGLPTLRLSG 120

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           DYLAIATL + EI +  ++    +  G +G     R                        
Sbjct: 121 DYLAIATLGLGEIIRITILNIPYV-GGASGFMGIPRYTSFT------------------- 160

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
                  +      +  +I  L  ++   A  +IR+N+ A  ++       K+ AF + +
Sbjct: 161 ------WVFWAMVFTVFVIKNLINSSHGRACISIRENEIAAEAMGVDTTRYKVLAFTIGA 214

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           AF G+AGA F+       P  F F ++  ++++V+LGG+ SL+    A  +L  V     
Sbjct: 215 AFAGIAGALFSHYFYIAHPASFTFMKSFDILTMVVLGGLGSLTGSITAAILLTFVSAALA 274

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
           G                      +  + L  ++L R   L   +  S  +
Sbjct: 275 GY---------------PEWRMVIYSLLLIALMLYRPQGLFGNKELSLKV 309


>gi|238019546|ref|ZP_04599972.1| hypothetical protein VEIDISOL_01415 [Veillonella dispar ATCC 17748]
 gi|237864245|gb|EEP65535.1| hypothetical protein VEIDISOL_01415 [Veillonella dispar ATCC 17748]
          Length = 337

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 121/309 (39%), Gaps = 19/309 (6%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y   + +  +I  +    +   +   G LSL      ++GAY   IL  +  L I 
Sbjct: 3   LLNPYYLQIVMFFIINAIMGISIYFTLA-SGQLSLGAAGFMSVGAYVGAILSLKADLPIV 61

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN--GKAGIY 151
           + I +  +++    +I+GLP+ + RG YLAIATL   E+ + I +         G +GI 
Sbjct: 62  VGIIIGGLVASLVAVIIGLPTTRLRGLYLAIATLGFGEVVRVIFLNLDITNGALGLSGIP 121

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              +          +        +     +    +LL +  L  +  + +  + +  A+ 
Sbjct: 122 SIPQELTNLAYELDIDGLMGID-AVAWGNLMAIIILLAILVLIIAFCVRINNSRVGRAFA 180

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            I+ +  A   +   +++ K+ AF + +   G+ G  +A   + I+P  F + + + ++ 
Sbjct: 181 AIKADDHAAELMGINVVYYKMMAFIIGAFIAGIGGGLYAHITNFINPTDFSYHKVVQILL 240

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             + GG   +      + IL  + E+   ++ Y                  +    L ++
Sbjct: 241 FPVFGGSNVVWGSVLGSFILTLLPEVLRFLSDY---------------RDIIYGALLVIL 285

Query: 332 ILMRSHSLL 340
           + +R   +L
Sbjct: 286 MAVRPDGIL 294


>gi|297559026|ref|YP_003678000.1| inner-membrane translocator [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296843474|gb|ADH65494.1| inner-membrane translocator [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 375

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 110/318 (34%), Gaps = 13/318 (4%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           + +      +      +    L++   A    ++ G +GLLS    + +A GAY+  +L 
Sbjct: 54  IPVLFEGALNSPPTLHLLAFCLVFGGLATSYDLLYGRVGLLSFGHALYFACGAYTAALLM 113

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
               L +    PV+ +      +++G  SL+  G  LA+ TL  ++    ++ +      
Sbjct: 114 RVVELPLLWAAPVAVVGGTLLSLLLGAVSLRVNGIALAMVTLAFAQAGSILVSR------ 167

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                    RL      +             V   + +Y+  +     +  ++ WL  + 
Sbjct: 168 ------DPGRLTGGEEGLSLDTDRVPGAFVGVANTVNLYWAAVAFAAFAVGVVWWLTSSP 221

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +   WR IR N++    L       KL+AF V      + G  +      ++P +     
Sbjct: 222 VGRVWRGIRANEQRVAVLGVNPYPYKLAAFTVGGGLASLGGVAYLLVTGGVTPGITTAEF 281

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH-TTLM 324
            + ++ +V LGG  +        A+          +      + L    +  +     ++
Sbjct: 282 TLTLLVMVALGGAGTRWGPLLGAALYTYADHRLLQLGGSEAFAALPAWIAAPLSQPLFIL 341

Query: 325 VIALFLVILMRSHSLLRL 342
                L++      L+ L
Sbjct: 342 GTLFVLMVFFFPGGLVAL 359


>gi|33600534|ref|NP_888094.1| amino acid ABC transporter [Bordetella bronchiseptica RB50]
 gi|33568133|emb|CAE32046.1| Putative amino acid ABC transport system, membrane protein
           [Bordetella bronchiseptica RB50]
          Length = 334

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 66/311 (21%), Positives = 115/311 (36%), Gaps = 24/311 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                  Y   + I  +++ + A  L+++ G  GLLS   +  + IG Y+  +L      
Sbjct: 33  PFAGLGGYALKVAIMAIVFAVLATSLNLIYGFTGLLSFAQIAFWGIGGYTAALLAVDAHW 92

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S WL +     ++ A  +++G  SL+      AI TL +  + Q +   W  +T G  GI
Sbjct: 93  SPWLGVLAGGAVAVAASLVIGYASLRLSRHSFAIVTLSLVLLMQLVAKDWVDLTRGPLGI 152

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                L          +             +  Y+++L    L+ + +  L  + I    
Sbjct: 153 PNLPTLE---------LALPGLGQLSSANPVVFYFIMLAFAVLALAGVHRLVGSRIGRTL 203

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I+ N+    S     +  KL AFAVS+   GM G  F      + P +F F    +++
Sbjct: 204 LAIKQNEPLTQSQGVATLRYKLLAFAVSALVAGMTGGLFVFYLSVVDPSIFDFYYTQMIL 263

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            +VI+GG  S   +  A+A+   + EL                         L+   L  
Sbjct: 264 IMVIIGGTGSFWGVIAASAVFTIIPELLR---------------VSPDLRLVLLGCVLVA 308

Query: 331 VILMRSHSLLR 341
            IL     +  
Sbjct: 309 AILALPQGIAG 319


>gi|163746701|ref|ZP_02154058.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanibulbus indolifex HEL-45]
 gi|161379815|gb|EDQ04227.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanibulbus indolifex HEL-45]
          Length = 401

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 122/348 (35%), Gaps = 25/348 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
            A              +       +  + +I+ +FA G +I+ G  G LS        +G
Sbjct: 21  FAPFLLNPFPANSALAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYLSFGHAAFLGVG 80

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           +YS V +      ++   + ++ +++G    ++G  SL+  G Y +I TL  +++  N+ 
Sbjct: 81  SYSAVWMFKLLSYNVVPALVLAVIMAGLFSALIGFISLRRSGIYFSILTLAFAQMSFNLA 140

Query: 138 IK-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP-----------SSFVIYEIFMYY 185
                PITNG+ G+ + +       +V +      F              +       YY
Sbjct: 141 YSVLTPITNGETGLQIYNSDPQYLQSVDAPSFPNLFGAAMNSSTTLFFGGWTFTFSVGYY 200

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
                  L+  + + + R+      R ++ NQ+             L+AF +S  + G+A
Sbjct: 201 FCAIFLILAFYLAIRIFRSPFGMMLRAVKSNQQRMNYTGLNTRPYTLAAFVISGMYAGLA 260

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G   AA       +  +++ +  V+ + ILGG  +L         +     +   +N   
Sbjct: 261 GGLLAAMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLGAGFIKYFENIFAKINDNV 320

Query: 306 FNSLLKFDCSFNMRHTTLM-------------VIALFLVILMRSHSLL 340
            +    F           +              +   LV++     L+
Sbjct: 321 LHGWFAFMPDGIEDAMVAIIHPFVGKGWHLTLGLLFMLVVIFLPGGLV 368


>gi|144898571|emb|CAM75435.1| inner-membrane translocator [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 357

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 69/326 (21%), Positives = 140/326 (42%), Gaps = 19/326 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A     +LFL    +    Y  S+ IQI    + A GL+I+VG  G +SL     +  GA
Sbjct: 30  AWAVLSVLFLIAAPSFLNNYHLSILIQIGFMGIAALGLNILVGYTGQISLGHAGFFGFGA 89

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           ++   L + +G+ + L +P++A+++   G++ G+P+ + +G YLAIAT     I ++   
Sbjct: 90  FASAWLNNSFGVPVVLAMPLAAVMTTVLGLLFGIPAGRLKGLYLAIATFASQFILEDFFA 149

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +    + G +G   A    F                  +  +   +YV+L    +   I 
Sbjct: 150 RADWFSGGSSGAAAAPVNLFGYE---------------LSGDKGFFYVVLFWVVVMFLIG 194

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L RT    A+  +RD+  +   +   +   ++ +F +SS + G+ GA +      +S 
Sbjct: 195 SNLLRTRDGRAFIAVRDHYLSAEVMGINLTKYRILSFGLSSFYAGLGGALYGHYLGFVSA 254

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG----MNFYYFNSLLKFDC 314
           + F    +I  + ++I+GG+ S++     T  ++ + E+  G            +   + 
Sbjct: 255 EGFTILMSIEFLGMIIIGGLGSVAGTLMGTTFMVLLPEVMEGGVSIAKSLIGGDVSWLNE 314

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLL 340
                    + +A+ L ++     L+
Sbjct: 315 GLAYIKQASIGLAIILFLIFEPDGLI 340


>gi|320011059|gb|ADW05909.1| inner-membrane translocator [Streptomyces flavogriseus ATCC 33331]
          Length = 362

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 109/322 (33%), Gaps = 15/322 (4%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L L   L           +    L++   A G  +++G  GLLS    + +A G+Y+  
Sbjct: 42  ALPLPGLLDGPVGSPGSLQLLATCLLFGALATGYDLLLGRTGLLSFGHALYFAAGSYATN 101

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK-WK 141
           +     GL       +      A  +++G  SL+  G   ++ TL  ++    ++ +   
Sbjct: 102 MFLLEAGLPFAAAAVLGVCFGAALALVLGSVSLRVTGIGFSMVTLAFAQAGSILVSRDPG 161

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
             T G+ G      L                    + +   +Y++ L    L+ +++   
Sbjct: 162 GFTGGEEGRAAPAELLPSW-------------LVGIDHTANLYWIALAYLVLTLAVVHRA 208

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R+     W  I++N++    L       KL+AF ++ A   + G          +P   
Sbjct: 209 VRSPTGRVWEGIKENERRVEVLGLKPYGFKLTAFVLAGALAAVGGLVHLLLTGGSTPQTT 268

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH- 320
                + ++ +V+LGG  +         +          +      + L       +   
Sbjct: 269 TSDFTLSLLVMVVLGGTGTRWGPMVGGILYTWADHRLGDLAGSGAVADLPAVLRVPLSQP 328

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
             L+ +    V+ +    L RL
Sbjct: 329 LFLLGVLFVAVVHLLPGGLARL 350


>gi|317125499|ref|YP_004099611.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Intrasporangium calvum DSM 43043]
 gi|315589587|gb|ADU48884.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Intrasporangium calvum DSM 43043]
          Length = 340

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 56/303 (18%), Positives = 119/303 (39%), Gaps = 27/303 (8%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           + + IL + +FA  + +++G  GLLS      +   AY+  ++  + G+   L +   A+
Sbjct: 49  VAMDILCWGLFAISIDLLLGFTGLLSFGHAAFWGGSAYATGVIAIKTGVPFPLAVLGGAV 108

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +    + +G  S++  G Y A+ TL  +++   I+ +W+ +T G+ G+    + +F   
Sbjct: 109 FAMVIAVPIGYLSVRRTGIYFAMVTLAFAQMLFFIVNQWRSLTGGENGLQNIPKNFFGVE 168

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            V +                + YY   G+  +   I   +  +        IRDN     
Sbjct: 169 AVETD-------------SFYFYYAGAGVILVGILIAWRVVNSPFGRVLTAIRDNPARAR 215

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           +L   +   K+ AF +S+   G+AG  F+ S    S     ++ +  V+ I +LGG+ +L
Sbjct: 216 ALGYDVERYKIVAFVISAGLAGLAGGVFSISHSFASLQEVGWTTSGKVVLITVLGGIGTL 275

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +++ + +                          +      L++L+  H +  
Sbjct: 276 WGGLVGAGVVVYLEDYLASAGISGIA--------------MITGAIFVLIVLLFRHGIWG 321

Query: 342 LRT 344
              
Sbjct: 322 TAR 324


>gi|254467220|ref|ZP_05080631.1| ABC transporter, permease protein [Rhodobacterales bacterium Y4I]
 gi|206688128|gb|EDZ48610.1| ABC transporter, permease protein [Rhodobacterales bacterium Y4I]
          Length = 326

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 109/322 (33%), Gaps = 22/322 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             +    L  L             + + + I V+      ++    G  SL  V+   +G
Sbjct: 4   FLIWIAALAALVALPHGLSFSQQEILVFLTINVLLVASYRLLT-LTGEWSLAHVVIMGVG 62

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYS  +L  + G+ + + + +  +I+    +++  P  + +G Y  I +    EI + + 
Sbjct: 63  AYSSALLTKKLGVYVPVSMLLGGVIAALIAVLLSFPLFRMKGFYFLIGSFAAGEIIRLLW 122

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +++    G  GI   D +            F              YY    +      I
Sbjct: 123 KRFRDPFGGAKGIKGIDPMPDFSIGFYKFDFFE---------PTSYYYFAGVIVAFCLWI 173

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  + ++ +   +  +    K   +    +   +  AFA++S F G++GA  A     I+
Sbjct: 174 LWRIEKSPVGLTFHAVHWQDKLAQASGVNVRAYRTLAFAIASGFAGISGALLAHYVGTIN 233

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F     + V++  I+GG  +         +L  + E+               +    
Sbjct: 234 PTAFDIDLMVFVLTWAIVGGTATFYGPILGCVVLTVLNEIVLR------------ELGLE 281

Query: 318 MRHTTLMVIALFLVILMRSHSL 339
                +    + L IL     L
Sbjct: 282 QMRPLVYGAIMILSILFLPSGL 303


>gi|300310683|ref|YP_003774775.1| amino acid ABC transporter composite ATP-binding protein/permease
           [Herbaspirillum seropedicae SmR1]
 gi|300073468|gb|ADJ62867.1| ABC-type amino acid transport system, composite
           ATP-binding/permease components protein [Herbaspirillum
           seropedicae SmR1]
          Length = 627

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/332 (13%), Positives = 111/332 (33%), Gaps = 31/332 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +   ++ L L       +  ++   I +  +   GL ++ G  GL S        +GA
Sbjct: 12  VALGLFIVLLALAPLVLPPFYMTLLNNIGLASLVVLGLVLLTGVAGLTSFGQAAFVGLGA 71

Query: 79  YSYV---------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
           Y                 +  S W  + V+ +++      +G  +LK  G YL + T+  
Sbjct: 72  YFSAALSAKVLPLPEALLWLQSPWPALAVALVLTALLAFAVGSVTLKLSGHYLPLGTIAW 131

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 I    +    G+ G+     + FLG  + S    F               ++  
Sbjct: 132 GISLYFIFGTLES-MGGQTGMSGIPSIAFLGVVLDSDRAMFG--------------LIWV 176

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              L  + +  L  +    A R ++       ++       ++  F +++    ++G  +
Sbjct: 177 AVLLGVAALRNLLDSREGRAIRALKGGIVMAEAMGVNTARMRIVVFVIAAVLAALSGWLY 236

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              +  ++P  F     I  + + +LGG + +      +++++ + E   G+        
Sbjct: 237 VHMQRFVNPSPFGLGFGIDYLFMAVLGGASHVWGAVLGSSLIVVLKEWLQGLLPVVLGRS 296

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             F        T +  + + +++      +  
Sbjct: 297 GNF-------ETIVFGLLIVVLLQRSREGIWP 321


>gi|254562672|ref|YP_003069767.1| branched-chain amino acid transport system permease
           [Methylobacterium extorquens DM4]
 gi|254269950|emb|CAX25928.1| putative branched-chain amino acid transport system permease
           protein [Methylobacterium extorquens DM4]
          Length = 347

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 67/315 (21%), Positives = 127/315 (40%), Gaps = 16/315 (5%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRY 88
           +  T +  + +++ I  LI  +   GL++ +G  G  SL      A+GAY+   +L    
Sbjct: 38  IPLTATDYWYNAILIPFLIMALAGLGLNLTMGYAGQASLGTGAFMAVGAYATYNLLLRLP 97

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            L + + +    +I+GA G+++GLPSL+ +G YL   TL    + + +  +    +N  +
Sbjct: 98  ELPLPVSLAGGGLIAGAVGLVVGLPSLRIKGFYLIAPTLAAQFLIEWVFNQVGWFSNYAS 157

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
              ++                       +      Y + L    +   +   L  +    
Sbjct: 158 SSAISAPRLVFLGY-------------DLSSPAGRYALTLTSVTVVTVLAWRLVGSQTGR 204

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSENI 267
            WR +RD + A   +   +  AKLSAF V +A  G+AGA +A A    +    F    + 
Sbjct: 205 NWRAVRDGETAAAVIGVPVARAKLSAFFVGAAVSGVAGALWAFAYLGTVDARSFDLDRSF 264

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             + I+I+GG++SLS      A ++    L   ++  +    L      +     L    
Sbjct: 265 QAMFIIIIGGLSSLSGSFIGAAFIVLTPILLTHLSNAFLGGSLD-GGQLSNLQRILFGAL 323

Query: 328 LFLVILMRSHSLLRL 342
           +   ++   + L  L
Sbjct: 324 IIGFLIKEPNGLAAL 338


>gi|119719514|ref|YP_920009.1| inner-membrane translocator [Thermofilum pendens Hrk 5]
 gi|119524634|gb|ABL78006.1| inner-membrane translocator [Thermofilum pendens Hrk 5]
          Length = 349

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 64/341 (18%), Positives = 129/341 (37%), Gaps = 55/341 (16%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR---------- 87
           ++  +G+   +YV+ A  L++  G LGL +      +A+GA+S   L  R          
Sbjct: 6   FLVDLGVLYSVYVILASSLNLEYGELGLPNFAKSAFFAVGAFSVGALSVRLGTLLLGITM 65

Query: 88  -------------------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
                                      +   + + ++  ++   G++   P+L+ R DYL
Sbjct: 66  EGEFKLKSVYYATLVSQALVNSPQLGVILFVVPLMIAVPLAALLGVLASYPALRLREDYL 125

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
            +  +  SEI + +   ++P+  G  G  V D L ++   ++               ++ 
Sbjct: 126 GMLLIAFSEIIRVVARNYEPLVGGTYGAGVVDFLAWIPPPLK---------------QVV 170

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +  +   + F        L R+      R IRDN+ A   L   +   +++  A+ S   
Sbjct: 171 LLALSSSIAFAIWLAYYRLSRSPFGRVLRAIRDNELAASVLGRDVAKMRMTVMALGSGMA 230

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
            +AG  +A     ++PD F  S+  +V  +VI+GG  +        A  I V      + 
Sbjct: 231 AVAGVLYAFYVGSVNPDDFTISKTFLVALMVIIGGRGNPYGALVGPATYIAVDRSIQFVK 290

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            Y     L      N     ++ +AL L+++ +   +   +
Sbjct: 291 QY-----LALPFDPNYASYVILGVALILIVMKKPEGIAPEK 326


>gi|259415846|ref|ZP_05739766.1| inner-membrane translocator [Silicibacter sp. TrichCH4B]
 gi|259347285|gb|EEW59062.1| inner-membrane translocator [Silicibacter sp. TrichCH4B]
          Length = 327

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 59/328 (17%), Positives = 113/328 (34%), Gaps = 15/328 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L   A++  L+          + +  ++  + +I  + A GL+I +G  GL+SL   + +
Sbjct: 6   LFNAALLLGLIAVPAWAVMTDEPFTITLATRAVILALAAAGLNIALGIGGLVSLGHAVFF 65

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IG Y+  IL         L+     +       ++ L ++        +  ++      
Sbjct: 66  GIGGYAMGILAHHAQSYTPLMEWPFLIEGTKFMPVIWLLAIVVSALAALVIGILSLRTTG 125

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              I            +      + G    S+     FP    +  I  Y + L +  + 
Sbjct: 126 AYFIMITLAFGQMFYYFAISWSTYGGEDGMSIYVRNDFPGLNTLAPIQFYGLCLAILVVV 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 LRR+    A    R       ++    +  KL AF +S    G+AGA FA    
Sbjct: 186 LVFSARLRRSPFGLALNAARQVPARVEAVGMDPMRLKLVAFVISGVITGLAGALFADLNR 245

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            +SP MF +  +  ++ +VILGG+  L          + +     G+  ++         
Sbjct: 246 FVSPTMFSWQFSGEIMILVILGGVGRLFGPVAGAVTFVALEHFLGGITEFWH-------- 297

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
                    + + L  V+L     +  L
Sbjct: 298 -------IFLGLILLAVVLFARGGITGL 318


>gi|329116317|ref|ZP_08245034.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus parauberis NCFD 2020]
 gi|326906722|gb|EGE53636.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus parauberis NCFD 2020]
          Length = 317

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 71/334 (21%), Positives = 136/334 (40%), Gaps = 42/334 (12%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +L  V  L+L   +G      Y   + + I I ++ A G ++V+G  G   L      
Sbjct: 11  WAVLVTVIFLVLSFLIGQGILGPYYVQILMGIGISIIMAMGTNLVLGFSGQFPLGQAGFM 70

Query: 75  AIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           AIGAY+  I+          ++ + V  +++G   +I+G P+L+ +GDYLAIATL ++EI
Sbjct: 71  AIGAYTTAIITQNIPTYLGFYVSMLVGILVAGLVAVIVGFPTLRLKGDYLAIATLGVAEI 130

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            +  ++    +TNG AG+    R                              V+     
Sbjct: 131 IRIAIVNGGEVTNGAAGLTGILRYTSWP-------------------------VVFAFVV 165

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   + +   +++I     ++R+++ A  S+       K++ FA ++    +AG+ +   
Sbjct: 166 LIIVLTMNFLQSSIGRQVISVREDEIAAESMGVNTTKIKVATFAFAAMTASVAGSLYVGY 225

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              + P  F    +I  + I +LGG+ S++    A  +L G+       +          
Sbjct: 226 IGTVVPKDFTIMRSIDYLIIAVLGGLGSMTGTILAAIVLGGLNMYLQSFSE--------- 276

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                     +  +AL LV++ +   LL  +   
Sbjct: 277 ------VRMIVYSLALILVMVFKPGGLLGTKEFQ 304


>gi|241666567|ref|YP_002984651.1| ABC transporter related [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240862024|gb|ACS59689.1| ABC transporter related [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 585

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 97/320 (30%), Gaps = 29/320 (9%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +  G     ++  ++  + +IY M A  + ++ G  G+L+      + +GAY+  ++ + 
Sbjct: 23  IVFGPMFLGRFSLNVLTRSMIYAMLAVTVDLLWGYTGVLTFGQAAFFGVGAYATAMVLTH 82

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
            G S  L +           ++                   +  +   I++     + G 
Sbjct: 83  IGASPALFVVALVAAVLVPLVLGLAVGWLSFYHGSTPLYATVISLVVPIVVTQLVFSGGT 142

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                +  + +    +     F    +S ++                A + +   R+   
Sbjct: 143 WTGSSSGLVGYETLPLGLPGYFRLSGASLLVL---------------AVLAIVFVRSDAG 187

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                IRDN+     L       K+    V +   G+AG  FA +   ++P+   F    
Sbjct: 188 RLLVAIRDNEARVAYLGMNPARLKIVLTGVLAGVCGLAGFLFANASGVVAPENTGFVFGT 247

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            ++    LGG  ++         +  +     G                      ++   
Sbjct: 248 ELVVWTALGGRGTIIGPLFGAIGIDYLSASLSG--------------DLPFLWQLIIGAL 293

Query: 328 LFLVILMRSHSLLRLRTPSN 347
              +I++    L  L T   
Sbjct: 294 FVAMIILLPGGLASLVTRFL 313


>gi|148252320|ref|YP_001236905.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. BTAi1]
 gi|146404493|gb|ABQ32999.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 315

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 55/315 (17%), Positives = 120/315 (38%), Gaps = 29/315 (9%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
                     +I ++  +I+I  + A  L++++G  G++S        IG Y+  IL   
Sbjct: 23  PVYSNLTGNIFILTLFTRIVILALAAVSLNLIMGYGGMMSFGHAAYLGIGGYAVGILAQE 82

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
              S W    V+  +S    +++G  SL+ RG Y  + TL  +++   +           
Sbjct: 83  GIGSGWAQFAVAIAVSALYALVIGALSLRTRGVYFIMITLAFAQMAYYVASGLARYGG-- 140

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                          +    R        +   +  YY+ L        +I  +  +   
Sbjct: 141 ------------DDGLTVYKRSDFGGLINLGNRVQFYYLCLFCLLAVVVLIWRIVNSRFG 188

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
              + +R N++   ++       KL+ F ++    G++GA  A + D +SP +  ++ + 
Sbjct: 189 LVLQGLRSNEQRMQAIGFPSKRYKLACFVIAGMLCGLSGALLANNTDFVSPAVMYWTRSG 248

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            ++ +VILGGM +L      + + + + E+   +  Y+                 +M   
Sbjct: 249 DLMVMVILGGMGTLMGPVVGSVVFLVLEEVLSQLTEYW---------------ALIMGPL 293

Query: 328 LFLVILMRSHSLLRL 342
           L L++L     ++ +
Sbjct: 294 LLLIVLFGRGGIMGM 308


>gi|299541879|ref|ZP_07052202.1| high-affinity branched-chain amino acid transport system permease
           protein [Lysinibacillus fusiformis ZC1]
 gi|298725617|gb|EFI66258.1| high-affinity branched-chain amino acid transport system permease
           protein [Lysinibacillus fusiformis ZC1]
          Length = 311

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 79/345 (22%), Positives = 139/345 (40%), Gaps = 42/345 (12%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++ +K      ++A+V   ++ L +       Y  +M I + I +M A  L IV+G  G 
Sbjct: 1   MKKSKVFWGYAVIALVIYAVVQLLITTEVIDLYYKNMLITMCINIMLAVSLHIVIGVTGQ 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
            S+      A+GAY   I+ ++  L   L I + A  +   G+I+G+P+L+ +GDYLAIA
Sbjct: 61  FSIGHAGFLAVGAYVSAIITTKLMLPFPLAILLGATAAAVAGLIVGIPTLRLKGDYLAIA 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL  +EI + I +    +                                     +  + 
Sbjct: 121 TLGFAEIIRIIFLNTDYVGGAAGMQVKY---------------------------LSNWT 153

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
                  L+  +I     +    A  +IR+++ A  ++     + K+ AFA+ S F G+A
Sbjct: 154 YAFFGVVLTILVISNFTNSRHGRACISIREDEIAADAMGINTTYYKVVAFAIGSFFAGLA 213

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA FA +   I P  F F ++  ++  V+LGG+ SLS    A   L  V           
Sbjct: 214 GAIFAHNFYIIQPTTFGFLKSFDILIYVVLGGLGSLSGSVIAAIFLTVVSTYLANF---- 269

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                            +  + L +V+L R   L+  +  +   +
Sbjct: 270 -----------PETRMIIYSLVLIIVMLYRPTGLMGTKEITQLFK 303


>gi|83944047|ref|ZP_00956504.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
 gi|83845294|gb|EAP83174.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
          Length = 644

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 100/311 (32%), Gaps = 26/311 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLI 96
                   IY + A GL+I  G +G++++       +GAY+  ++          I + +
Sbjct: 355 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQLFVPDYTLSIIIAL 414

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++  ++ A G++M    +     +  + TL+ +      L +      G     +    
Sbjct: 415 PLAFAVTFAAGVVMERLVI-RHLYHRPLETLLATFGISIALQQLAKNIFGTQARPLTSPA 473

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     +      S  +        + +        I+  L+RT +    R +  N
Sbjct: 474 ---------WLDGAWVISDVIQISYIRIAIFVLALLFLGLILFVLKRTRLGLEVRAVTQN 524

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                S+        +  F + S   G+AG          S     +     +  +V   
Sbjct: 525 PGMAASMGINPDRINMMTFGLGSGIAGIAGVAIGLYAKVTSEMGADYIVQSFMTVVVGG- 583

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
            + ++       +++  +              +  F+ S  +   T MV+ + L I  R 
Sbjct: 584 -VGNVWGTLAGASLIGFLQ-----------KGIEWFNPSNTLAAQTYMVLFIILFIQFRP 631

Query: 337 HSLLRLRTPSN 347
             ++  +  + 
Sbjct: 632 KGIVAQKGRAA 642


>gi|288962131|ref|YP_003452426.1| inner-membrane translocator [Azospirillum sp. B510]
 gi|288914397|dbj|BAI75882.1| inner-membrane translocator [Azospirillum sp. B510]
          Length = 342

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 58/326 (17%), Positives = 116/326 (35%), Gaps = 26/326 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +  PL+    L A        ++  +I    +F   L +V+G  G+ +L     +  GAY
Sbjct: 31  IGVPLIAAAGLAAYWLLPEDLALLTRIAASALFVLSLDLVLGYGGIATLGQAAMFGTGAY 90

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  I    +    + L+ V  +  G   +  G   L  RG  L + T+ + +I Q +  K
Sbjct: 91  AAGIAAVNWIDDPFALLAVGGLAGGLIALATGALILHARGLTLLMLTIAVGQIVQEVANK 150

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
            +  T G  G+   D     G               F ++    Y   L +      +  
Sbjct: 151 ARDWTGGSDGLSGIDPAPVFGL------------FRFDMFGHTAYLFALAVLVAGLVVAR 198

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            + R+    A R + ++     ++  +     ++ + V+  F G+AGA  A +   +  D
Sbjct: 199 RIVRSPFGLACRGVGEDPLRISAIGGSPKAYLVALYGVAGVFAGVAGALTAVTSGIVGLD 258

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
              FS +   + +++LGG   L      T   +GV  +    + Y++             
Sbjct: 259 SAGFSWSAEALVMLVLGGTGRLYGAVIGTVAFMGVHHVLAANDPYHW------------- 305

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTP 345
               + + L  ++L     +      
Sbjct: 306 -MAFIGLFLIGIVLFLPGGIASGVER 330


>gi|91975526|ref|YP_568185.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91681982|gb|ABE38284.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 352

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 56/337 (16%), Positives = 117/337 (34%), Gaps = 32/337 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +  +   L  +   +L    L     Q Y+   G ++LI  +FA    +V G  G++S  
Sbjct: 17  RKRRRRVLPIIELVVLAIGLLLPLVLQDYLTVFGTRVLILCLFALSFDLVWGYSGIMSFG 76

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
             + +    Y   +L    G++  L++  + ++ G    ++    L    +  ++  + +
Sbjct: 77  QAVFFGSAGYGVALLARDLGVTSMLVVIPAGVLIGFSIALLIGGFLLLGRNPSSVIFVAL 136

Query: 130 SE----IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                    + L +      G+ GI     ++     +                    YY
Sbjct: 137 GTLTGSYAFDRLARGWYYLGGQNGIPSIPPMHIGSYDLTE--------------GPVFYY 182

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            +L +  L      +L R+    A   +R+N++        +   K   F++  A  G+A
Sbjct: 183 FVLAILLLVYLACRFLVRSQFGLALAGLRENEQRIAFFGYKVQHIKAIIFSLGGAIAGLA 242

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G+ +A     + P+M     +  V+  V+ GG  +L        ++  V           
Sbjct: 243 GSLYAFHEGFVWPNMLGVVMSTQVVLYVLFGGSGTLIGAVIGAVVIEIVSFWLSN----- 297

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                    S+      ++   + LVIL R   L+ L
Sbjct: 298 ---------SYQEIWPIILGALMLLVILFRPAGLISL 325


>gi|295099270|emb|CBK88359.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           (TC 3.A.1.4.-) [Eubacterium cylindroides T2-87]
          Length = 293

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 105/303 (34%), Gaps = 24/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GA++     + + L+ ++ + +
Sbjct: 8   MINGLSLGSIYALIALGYTMVYGIIKLINFAHGDIYMLGAFTAFYATTFFHLNFFVALII 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  G+++   + K       I  LI +     +L        G            
Sbjct: 68  AMLLCGVLGVVIERIAYKPLRHATRITALITAMGVSYVLEYTMQYFAGSD---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           + T    L+    F    V   +   Y+ +    L   +   + +T +  A R +  ++ 
Sbjct: 118 VKTFPTDLLENTAFSLGGVRITMMQIYIFVITIILMVLLTYIVNKTKMGRAMRAVSVDED 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       F + S   G+AG       + I+P M   +  +      + GG+
Sbjct: 178 AAKLMGINVDTTISFTFFLGSCLAGVAGVLVGVYYNSINPLM-GMTPGLKAFIAAVFGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++         +     L        +                ++ + L LV++++   
Sbjct: 237 GNIPGAMIGGLFIGIAETLVTAYGSSLYKDA-------------IVYVILILVLILKPDG 283

Query: 339 LLR 341
           LL 
Sbjct: 284 LLG 286


>gi|218678798|ref|ZP_03526695.1| amino acid ABC transporter, permease protein [Rhizobium etli CIAT
           894]
          Length = 172

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 54/160 (33%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+A + + LRR  I  AW  +R+++ A  SL    +  KL+AFA  + F G AG+FFAA
Sbjct: 1   MLTAYVTIRLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFGGFAGSFFAA 60

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  +SP+ F F E+ +V++IV+LGGM SL+ IA A  +++G  E    M+  +   +  
Sbjct: 61  RQGFVSPESFIFLESAVVLAIVVLGGMGSLTGIAVAAIVMVGGTEALREMD--FLKVVFG 118

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            D +  +    L  +A+ +V+L +    +  R P+ FL+ 
Sbjct: 119 PDFTPELYRMLLFGLAMVVVMLFKPRGFVGSREPTAFLKE 158


>gi|220923853|ref|YP_002499155.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219948460|gb|ACL58852.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 295

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 71/305 (23%), Positives = 126/305 (41%), Gaps = 17/305 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            YI ++ I   IYV+ A GL++  G  G+ +   V  + IGAY+  +L        +  +
Sbjct: 3   AYIIAILIISGIYVLLALGLNLQYGLTGITNFGHVGFFCIGAYTAALLSQVSVPWPFAFL 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +A+        +GL SLK R DY AI +L  SE+ + ++   K +T G  GI    +L
Sbjct: 63  AGAALA-ALTAWPLGLISLKLRDDYFAIVSLGFSEVVRIVVTSEKWLTKGVQGITGIPKL 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           +              F  + +   + +  +L+ +  L+      + R+        IRDN
Sbjct: 122 F-------------AFLGTGITQAVAVLLLLVAVNVLAGLSKSRIVRSPFGRMIEAIRDN 168

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++A  +L       K+    + +A  G+AG F+A     I P+ F       +   +I+G
Sbjct: 169 EEAVKALGKDPSKFKIQVLMLGAALAGIAGGFYAHYIGYIVPEQFVPLITFYIWMAIIIG 228

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+  +S     T IL+  +E    +           +         ++ +AL L  L R 
Sbjct: 229 GVGPISGALVGTLILMFFLEGSRFLRGLI---PFVSEVEMASIRLGVIGLALVLFTLYRP 285

Query: 337 HSLLR 341
             L+ 
Sbjct: 286 QGLMG 290


>gi|307944448|ref|ZP_07659788.1| inner-membrane translocator [Roseibium sp. TrichSKD4]
 gi|307772197|gb|EFO31418.1| inner-membrane translocator [Roseibium sp. TrichSKD4]
          Length = 358

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 76/328 (23%), Positives = 134/328 (40%), Gaps = 13/328 (3%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +   V   + F+ +  T +  ++ S+ I  L++ + A GL+++ G  G LSL       +
Sbjct: 27  IGMAVILAVAFIVVPLTANDFFLTSIMIPFLVFSLAAIGLNVLTGFCGQLSLGTGAFMGV 86

Query: 77  GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GAY+   +      +++ L + +S   S   G I GLPSL+ +G YLA+ TL      + 
Sbjct: 87  GAYAAYKLTTIFPDVNVVLFVLISGFFSAGIGAIFGLPSLRIKGLYLAVTTLAAQFFLEW 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             I+   + N                 V     F    S      +  Y+V+LG+    A
Sbjct: 147 CFIRIPWLYN---------DNASGAIEVPKREMFGVIVSGAEATPLARYFVVLGITVFIA 197

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254
            +I  + R  I  +W  IRD   A   +    +  KL AFAVSS   G+AGA       +
Sbjct: 198 FLIANVLRGRIGRSWMMIRDMDIAAELMGIRPLQTKLMAFAVSSYICGVAGAMMVFFWLN 257

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
              P  +  + +  ++ +VILGG+ SLS      A +  +  +   +       +     
Sbjct: 258 AAEPSSYSINLSFQILFMVILGGLGSLSGAFLGAAFIWILPVMLKFIPSAIGLEIGA--E 315

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +       ++   +   +++  H   RL
Sbjct: 316 TVEHLTFMVVGGLIIFFLIVEPHGFARL 343


>gi|257093216|ref|YP_003166857.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257045740|gb|ACV34928.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 358

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 74/345 (21%), Positives = 137/345 (39%), Gaps = 23/345 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +  +++        V   +  F+ +     +  + ++ I  LI  + A G++I+VG
Sbjct: 18  QIFPIAQDRW------AIVGLLVFAFIGIPLLVDEYLLRAILIPFLILSLAALGVNILVG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
             G ++L      A+GAY+         GL + L + +  + + A G++ G+PSL+ RG 
Sbjct: 72  FCGQITLGAGAFMAVGAYAAYNFHIRIEGLPLLLSLLLGGLTAAAVGIVFGIPSLRVRGL 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL        + ++                     ++    +   +     +   
Sbjct: 132 YLAVATLAAQFFTDWVFLR-------------VPWFTDNASSGSVSVSNLQVLGWPIAAP 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y   LG   + A +   + R+AI   W  IRD   A   +    +FAKLSAFAVSS 
Sbjct: 179 VDKYLFCLGWLTVFALLAKNMTRSAIGRQWMAIRDMDVAAEVIGIRPLFAKLSAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           F+G AGA +         P  F    +  ++ +VI+GG+ S+       A ++ +     
Sbjct: 239 FVGTAGALWGFIHLASWEPAAFSVDRSFQLLFMVIIGGLGSIMGSFFGAAFIVILPIALN 298

Query: 300 GMNFYYFN--SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                      +       +     +    +   ++   H + RL
Sbjct: 299 QFLPAIGGLFGITISTAGISHAELIIFGALIIFFLIKEPHGIARL 343


>gi|288574274|ref|ZP_06392631.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570015|gb|EFC91572.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 293

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 75/306 (24%), Positives = 131/306 (42%), Gaps = 31/306 (10%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            YI ++   I I  + A+GL+I+VG  G +SL     + IGAYS  +L ++ GLS W  +
Sbjct: 2   SYIITVATFISIQAIVAYGLNIIVGYAGQISLGHAAFFGIGAYSAGLLATKAGLSFWAAL 61

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P+   I    G+I GLPSL+ + D+LAI T+ ++ I +++ +                  
Sbjct: 62  PLVVAICAVIGIICGLPSLRLKADFLAITTIGINFIVESLFLYV---------------- 105

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
            F G  +              +       + L    L   +  W  R+ +  A  ++R+ 
Sbjct: 106 PFFGGALGLGGIPRVVFLGNKLKGGEFLTLCLLFLALVMFLSWWFSRSWMGLACISLREE 165

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  S+  + +  KL AF + S   G+ GA +A     I+P  F F  +++++S+++LG
Sbjct: 166 ETAASSMGVSPVKFKLVAFVLGSVIAGIGGALYAHQMRFIAPSDFGFPVSVMLLSLIVLG 225

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM +         IL  + EL   +  Y                  +  + L  +I  + 
Sbjct: 226 GMGTFWGPLVGAIILGSLPELARPLMEY---------------RMLIYSLLLLGMIRFQP 270

Query: 337 HSLLRL 342
             LL  
Sbjct: 271 QGLLGE 276


>gi|309779626|ref|ZP_07674385.1| branched-chain amino acid ABC transporter, permease protein
           [Ralstonia sp. 5_7_47FAA]
 gi|308921567|gb|EFP67205.1| branched-chain amino acid ABC transporter, permease protein
           [Ralstonia sp. 5_7_47FAA]
          Length = 347

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 68/328 (20%), Positives = 130/328 (39%), Gaps = 16/328 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            V  L+ +  +    S  ++D++ I  L   + A GL+++ G  G LS+      A+GA+
Sbjct: 19  AVTLLVAYFVVPLVASDYWLDAILIPFLALSLAAVGLNLLTGYAGQLSVGSAAFMAVGAF 78

Query: 80  SYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           +      R     + + I ++ + + A G+  GLPSL+ RG YLA++TL      Q  L 
Sbjct: 79  AAYNFNLRVEGLPLPVSIVLAGLAATAIGVAFGLPSLRLRGFYLAVSTLAAQFFVQWALT 138

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           K+   +N  A   +                               Y   L +  +  +++
Sbjct: 139 KYGWFSNNNASGVIDAPP-------------IVVAGFAFDTPALRYVFALTVVTILTALV 185

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRIS 257
             L +T   + +  +RDN+ A       ++  KL AFA+SS  IG+AG  +       + 
Sbjct: 186 WRLVQTPTGHHFIAVRDNEMAARVTGVPVLRTKLLAFAISSFVIGVAGVLWGFVYLRTVE 245

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F    +  ++ IVI+GG+ ++       A+++    L      + F          +
Sbjct: 246 PAGFNLDRSFQILFIVIIGGLATIRGAFLGAALVVVFPLLLSRFGAFVFGGRFDSGV-LD 304

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTP 345
           +    ++   +   ++     L  L   
Sbjct: 305 LSQRIVIGALIVAFLIAEPQGLAALWQR 332


>gi|115360061|ref|YP_777199.1| inner-membrane translocator [Burkholderia ambifaria AMMD]
 gi|115285349|gb|ABI90865.1| amino acid/amide ABC transporter membrane protein 1, HAAT family /
           amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Burkholderia ambifaria AMMD]
          Length = 603

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 72/324 (22%), Positives = 130/324 (40%), Gaps = 33/324 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V  ++    L    +  Y+        +Y + A  L++V G++G +SL       IGA
Sbjct: 312 VLVVLIVAAAVLPWLGASSYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGA 371

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L S  G S  + IP + +I+   G ++  P+ + RG Y++IATL + E+   +++
Sbjct: 372 YASALLSSDLGWSAAVTIPCAGVITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVIL 431

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  +T G  GI     L +                         Y+    +  + A + 
Sbjct: 432 NWDGLTRGPLGITGIAPLPW------------------AATARAAYWFTFAVLIVFALVQ 473

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L R+ +    R +R++  A  +        K  AFAV     G++G   A     I+ 
Sbjct: 474 VRLLRSHLGRTLRAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINH 533

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F    +I+ +++VILGG+ ++         LIG+ EL      Y              
Sbjct: 534 QTFDSQVSILALTMVILGGLGNVLGGIVGAIALIGLPELFRWAADY-------------- 579

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
               +  + L L++  R   LL  
Sbjct: 580 -RMLIYGLVLLLLVRFRPQGLLGT 602



 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 107/305 (35%), Gaps = 25/305 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  I   IY + A GL+++ G   L++      Y +GA+   +  +R+GL + + +
Sbjct: 6   DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +  GA G+ +    L+       IA L+ +     IL +   +  G     V   L
Sbjct: 66  AAVVIGCGALGVAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             +          +       +A +  +LR T +  A R    +
Sbjct: 126 PDWH-----------LRIAGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +     + FA++ A  G++G       + I P M  F   +  +  +++G
Sbjct: 175 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++      + +L  V      +    +  L  F               L + ++ R 
Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280

Query: 337 HSLLR 341
           + L  
Sbjct: 281 NGLFS 285


>gi|99082075|ref|YP_614229.1| inner-membrane translocator [Ruegeria sp. TM1040]
 gi|99038355|gb|ABF64967.1| inner-membrane translocator [Ruegeria sp. TM1040]
          Length = 327

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 58/325 (17%), Positives = 112/325 (34%), Gaps = 15/325 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
            A++  L+          + +  ++  + +I  + A GL+I +G  GL+SL   + + IG
Sbjct: 9   AALMLGLIAVPAWALMSDEPFTITLATRAVILALAAAGLNIALGIGGLVSLGHAVFFGIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  IL         L+     +       ++ L ++        +  ++         
Sbjct: 69  GYAMGILAHHAQSYTPLMEWPFLIEGTKFMPVIWLLAVVVSALAALVIGILSLRTTGAYF 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I            +      + G    S+     FP    +  I  Y + L +  +    
Sbjct: 129 IMITLAFGQMFYYFAISWTTYGGEDGMSIYVRNDFPGLNTLAPIQFYGLCLAILVVVLIF 188

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRR+    A    R       ++    +  KL AF +S    G+AGA FA     +S
Sbjct: 189 TARLRRSPFGLALNAARQVPARVEAVGMDPMRLKLVAFVISGVITGLAGALFADLNRFVS 248

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P MF +  +  ++ +VILGG+  L          + +     G+  ++            
Sbjct: 249 PTMFSWQFSGEIMILVILGGVGRLFGPVAGAVTFVALEHFLGGITEFWH----------- 297

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                 + + L  V+L     +  L
Sbjct: 298 ----IFLGLILLAVVLFARGGITGL 318


>gi|251790326|ref|YP_003005047.1| urea ABC transporter permease protein UrtC [Dickeya zeae Ech1591]
 gi|247538947|gb|ACT07568.1| urea ABC transporter, permease protein UrtC [Dickeya zeae Ech1591]
          Length = 358

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 64/342 (18%), Positives = 106/342 (30%), Gaps = 27/342 (7%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           IL  L V+    L           Y  ++  +IL Y + A  L +V G  GLLSL   + 
Sbjct: 24  ILAALVVLPFCALLPAENPLAISTYTLTLIGKILCYAVVAVALDLVWGYAGLLSLGHGLF 83

Query: 74  YAIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           +A+G Y+  +                   W  +P     +      + L  L      L 
Sbjct: 84  FALGGYAMGMYLMRQAAGDGLPAFMSFLSWTELPWFWTGTQHFAWALCLIILVPGLLALL 143

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL---GTTVRSLIRFFRFPSSFVIYE 180
                     +++           AG+ +  R                   FP S     
Sbjct: 144 FGYFAFRSRIKDVYFSIMTQALTYAGMLLFFRNETGLGGNNGFTGFTTLLGFPVSATATR 203

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           I ++   + +  LS    +WL R+        +RD +          +  KL  + +S+ 
Sbjct: 204 IGLFIATVLLLALSLVSCMWLTRSKFGRVLTAVRDAENRLMFCGYDPMGFKLFVWTLSAV 263

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             G+AGA +      I+P     + +I     V LGG  SL        I+ G       
Sbjct: 264 LCGLAGALYVPQVGIINPSEMSPTNSIEAAIWVALGGRGSLVGPILGAGIVNGAKSW--- 320

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                      F  +F       + +   LV L     ++ L
Sbjct: 321 -----------FTVAFPDFWLFFLGLMFILVTLFLPRGVIGL 351


>gi|226355324|ref|YP_002785064.1| branched-chain amino acid ABC transporter permease [Deinococcus
           deserti VCD115]
 gi|226317314|gb|ACO45310.1| putative branched-chain amino acid ABC transporter, permease
           component [Deinococcus deserti VCD115]
          Length = 318

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 111/265 (41%), Gaps = 15/265 (5%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           + + IL + +FA    ++ G  GLLS      +   AY+   L S       + +    +
Sbjct: 40  LALDILAWGLFAVAFDLLFGFSGLLSFGHAAFWGSSAYATAYLLSNGQSVP-VAMLGGTL 98

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           ++    + +   S++  G Y ++ TL  +++   + ++W  +T G+ G+    R  FLG 
Sbjct: 99  VALTLALPVAYLSVRSAGIYFSMITLAFAQMLSFLALQWTDVTGGENGLQGFARPSFLGL 158

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
              +                  YY  L +  +   I     R+    A + +RDN++   
Sbjct: 159 DFSNSTT--------------RYYFCLAVFAVGFYIAYRTVRSPFGQAQQAVRDNEQRAQ 204

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           S+    +  K +AF +S+   G+AG+ ++     +S ++  +  +  V+ + +LGG T+L
Sbjct: 205 SIGYNPVRFKFTAFLISATLAGLAGSMYSFGHGVVSLEVVNWRTSGEVVMMTLLGGTTTL 264

Query: 282 SKIAKATAILIGVVELCCGMNFYYF 306
                   +++ + ++    N    
Sbjct: 265 FGPVIGAGLVLLLRDVLTTANLPVG 289


>gi|126738114|ref|ZP_01753835.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
 gi|126720611|gb|EBA17316.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
          Length = 356

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 51/336 (15%), Positives = 119/336 (35%), Gaps = 9/336 (2%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L +   L+                   +I I+++      +++G  G++S    + + 
Sbjct: 16  LALILGGILICLALAPFLFPGVRTVDTAARICIFIVLVASYDLLLGYGGIVSFAHTMFFG 75

Query: 76  IGAYSYVILGSRYGLSI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           IGAY   +  S  G       +     A+ + A   ++GL SL+ R  + A+ TL ++  
Sbjct: 76  IGAYGVALASSHMGRGFDAIAVGAVTGALAAAALAFVIGLFSLRVRAIFFAMITLAVASA 135

Query: 133 FQNILIKWKPITNGKAG-IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
              ++ +   +T G+ G  +   R               R     +  ++  YY +    
Sbjct: 136 VAVLVSQLSGLTGGEDGLTFKTPRALGPAFKFGKEAFDGRLFGVKLNGKLLAYYFVFFGS 195

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           F    ++L +  +      + IR+N     S+   +++ +++A  +S+A   +AG+ +A 
Sbjct: 196 FCLFLLMLRVVNSPFGRVLQAIRENDFRAESIGYRVVYYRVAATCLSAAIAALAGSLYAI 255

Query: 252 SRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
               + PD        I ++ +V++GGM +L        + +        +         
Sbjct: 256 WLRYVGPDTVLSMELMIDILLMVVIGGMGTLYGAVIGAVLFVMAQNYLQNLMGAAAELTS 315

Query: 311 KFDCSFNMR----HTTLMVIALFLVILMRSHSLLRL 342
                  +         + +   L +      ++  
Sbjct: 316 GLPVLPQLLNADRWLLWLGVLFILSVYFFPTGIVGR 351


>gi|118475595|ref|YP_891603.1| ABC transport system permease protein [Campylobacter fetus subsp.
           fetus 82-40]
 gi|118414821|gb|ABK83241.1| ABC transport system permease protein [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 351

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 75/354 (21%), Positives = 133/354 (37%), Gaps = 37/354 (10%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +  V   + FLFL  +   +Y   +   I I+++ A   +++ G  G  SL      AIG
Sbjct: 9   VLFVALAVGFLFLSNSYFSEYSLRIVNNIAIFIILAISYNLINGVTGQFSLEPNGFVAIG 68

Query: 78  AYSYV--------------------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           AY+                      I+ + +  +    + VS + +    +I+ +P  + 
Sbjct: 69  AYAAALLLLNSDSKLYQFDVTEPSSIILAIHTTNFIFAMLVSGICATILALILAMPVFRV 128

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RGDYLAI TL    I Q + + +   TNG  G+    R                      
Sbjct: 129 RGDYLAIVTLGFGFIIQLLAVNFPAYTNGSLGLNEVLR----------------VDGDGN 172

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I      +    +  ++   IL L  +    A + +RD++ A  ++       K  AF V
Sbjct: 173 ISRYTNIFYSGSVAIIAVVAILNLIYSKFGRAMKAVRDDEDAATAMGINTFRVKTLAFCV 232

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           S+ F G+ GA        +SPD F F     ++ I++LGG+ S +     T ++IG  E 
Sbjct: 233 SAFFEGVGGALLVGLLGSVSPDQFTFMFTFQLLIIIVLGGLGSTTGAILGTILVIGGSEW 292

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
              ++    N       +F      +  + L  V+L     ++          +
Sbjct: 293 LRFLDEP-MNIFGYETPAFPGLRMVVFSVVLIFVMLFARRGIMGQMELGELFNK 345


>gi|238026428|ref|YP_002910659.1| branched-chain amino acid ABC transporter permease [Burkholderia
           glumae BGR1]
 gi|237875622|gb|ACR27955.1| Branched-chain amino acid ABC transporter, permease protein
           [Burkholderia glumae BGR1]
          Length = 537

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/291 (12%), Positives = 81/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ + +            +++              
Sbjct: 263 ITYGLIGVINMAHGEFLMIGAYATYVVQTLFQRYAPGAFDWYPLVAMPASFAAAALVGIV 322

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                ++   +     + +L  +           +      +     + +         +
Sbjct: 323 LER--SVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVANPAWMSGGVTVMQNL 380

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     + A     L RT +    R +  N++    +          AFA 
Sbjct: 381 ILPYNRIVILAFSLAVVAVAWGVLTRTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 440

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          +  I     V+LGG+  ++        L  V + 
Sbjct: 441 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVVGGFGLGLVSKA 498

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 499 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 536


>gi|33596765|ref|NP_884408.1| amino acid ABC transporter [Bordetella parapertussis 12822]
 gi|33573466|emb|CAE37452.1| Putative amino acid ABC transport system, membrane protein
           [Bordetella parapertussis]
          Length = 334

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 66/311 (21%), Positives = 115/311 (36%), Gaps = 24/311 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                  Y   + I  +++ + A  L+++ G  GLLS   +  + IG Y+  +L      
Sbjct: 33  PFAGLGGYALKVAIMAIVFAVLATSLNLIYGFTGLLSFAQIAFWGIGGYTAALLAVDAHW 92

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S WL +     ++ A  +++G  SL+      AI TL +  + Q +   W  +T G  GI
Sbjct: 93  SPWLGVLAGGAVAVAASLVIGYASLRLSRHSFAIVTLSLVLLMQLVAKDWVDLTRGPLGI 152

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                L          +             +  Y+++L    L+ + +  L  + I    
Sbjct: 153 PNLPTLE---------LALPGLGQLSSANPLVFYFIMLAFAVLALAGVHRLVGSRIGRTL 203

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I+ N+    S     +  KL AFAVS+   GM G  F      + P +F F    +++
Sbjct: 204 LAIKQNEPLTQSQGVATLRYKLLAFAVSALVAGMTGGLFVFYLSVVDPSIFDFYYTQMIL 263

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            +VI+GG  S   +  A+A+   + EL                         L+   L  
Sbjct: 264 IMVIIGGTGSFWGVIAASAVFTIIPELLR---------------VSPDLRLVLLGCVLVA 308

Query: 331 VILMRSHSLLR 341
            IL     +  
Sbjct: 309 AILALPQGIAG 319


>gi|256371322|ref|YP_003109146.1| inner-membrane translocator [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007906|gb|ACU53473.1| inner-membrane translocator [Acidimicrobium ferrooxidans DSM 10331]
          Length = 339

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 107/322 (33%), Gaps = 29/322 (9%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG-------- 89
           Y  ++G+   IY +FA GL+I  G  G+L+   +   AIG Y   +    +         
Sbjct: 7   YAATLGVYFCIYNIFALGLNIQFGYAGILNFTVITFMAIGGYMAGVASLTHEVPSSGIYY 66

Query: 90  ------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
                      ++  +A       +I  +   + R DYLAI TL    I   ++     I
Sbjct: 67  ILGLGLPWPISMLIGAASAGLLGYLIGLVALRRLRSDYLAIVTLAAGSIIYGLVGNNTKI 126

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
            +G  G+    + +                     Y +        +  +   +   L R
Sbjct: 127 FDGFEGLVGVPQPFNGVLQ-----------LGPNSYSLVFLAFSAVVMAICWLLANRLYR 175

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           + +    R IR++     +        ++ A  +   F+G+ G         ++P  +  
Sbjct: 176 SPLGRTMRAIREDLDVAEAFGKHTYRVRMIAMVLGCVFVGIGGVLTIWYVTALAPAGWGT 235

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           SE  ++ + +I+GG  + +     + ++  +             ++              
Sbjct: 236 SETFVIWAALIVGGRGNNTGAVVGSFLVAVLFNEATRF----LPAISSMPNLIPEIRNMC 291

Query: 324 MVIALFLVILMRSHSLLRLRTP 345
           +   + LV+  R   ++  R  
Sbjct: 292 IGALVILVLWFRPQGVVPERKA 313


>gi|269797728|ref|YP_003311628.1| inner-membrane translocator [Veillonella parvula DSM 2008]
 gi|294793494|ref|ZP_06758631.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Veillonella sp. 3_1_44]
 gi|269094357|gb|ACZ24348.1| inner-membrane translocator [Veillonella parvula DSM 2008]
 gi|294455064|gb|EFG23436.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Veillonella sp. 3_1_44]
          Length = 336

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 121/309 (39%), Gaps = 19/309 (6%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y   + +  +I  +    +   +   G LSL      ++GAY   IL  +  L I 
Sbjct: 3   LLNPYYLQIVMFFIINAIMGISIYFTLA-SGQLSLGAAGFMSVGAYVGAILSLKADLPIV 61

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN--GKAGIY 151
           + I +  +++    +I+GLP+ + +G YLAIATL   E+ + I +         G +GI 
Sbjct: 62  VGIIIGGLVASLVAVIIGLPTTRLKGLYLAIATLGFGEVVRVIFLNLDITNGALGLSGIP 121

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              +          L        +     +    +LL +  L  +  + +  + +  A+ 
Sbjct: 122 SIPQELTNYAYEFDLDGLMGID-AVAWGNLMAIIILLAILVLIIAFCVRINNSRVGRAFA 180

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            I+ +  A   +   +++ K+ AF + +   G+ G  +A   + I+P  F + + + ++ 
Sbjct: 181 AIKADDHAAELMGINVVYYKMMAFIIGAFIAGIGGGLYAHITNFINPTDFSYHKVVQILL 240

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             + GG   +      + IL  + E+   ++ Y                  +    L ++
Sbjct: 241 FPVFGGSNVVWGSVLGSFILTLLPEVLRFLSDY---------------RDIIYGALLVIL 285

Query: 332 ILMRSHSLL 340
           + +R   +L
Sbjct: 286 MAVRPDGIL 294


>gi|73543044|ref|YP_297564.1| inner-membrane translocator:ABC transporter related [Ralstonia
           eutropha JMP134]
 gi|72120457|gb|AAZ62720.1| inner-membrane translocator:ABC transporter related [Ralstonia
           eutropha JMP134]
          Length = 613

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 55/324 (16%), Positives = 128/324 (39%), Gaps = 22/324 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +  +  +++   +    + ++  ++G  I +Y + A GL ++ G  G+ S        +G
Sbjct: 27  VLTLLFIVVLALMPVLPTPEFWITLGNYIGLYSIVAIGLVLLTGVGGMTSFGQAAFVGLG 86

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYS   L +++GLS W  + V  +I+ AC  ++GL +++  G YL +AT+        + 
Sbjct: 87  AYSTAYLTTQFGLSPWFGLLVGLVITMACAYVIGLITMRMSGHYLPLATIAWGLSLFFLF 146

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
              + +     G+     L   G  ++S                 M+Y++  +  L+   
Sbjct: 147 GNLEFL-GKYDGLNGIPVLSLFGIELQS--------------GRSMFYLIWAVVLLAVLA 191

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  +    A R ++       ++     + K+  F V++    ++G  +A  +  ++
Sbjct: 192 VQNLLNSRPGRAMRALKGGGVMAEAMGVNTAWMKVVVFVVAAVLACISGFLYAHLQRAVN 251

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F  +  I  + + ++GG+  +        +L  + +   G+      +   F     
Sbjct: 252 PTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGLLTILKDTLQGLLPKLLGANGNF----- 306

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                +  + L L++      L  
Sbjct: 307 --EIIVFGVLLVLLLQYARDGLWP 328


>gi|148549923|ref|YP_001270025.1| inner-membrane translocator [Pseudomonas putida F1]
 gi|148513981|gb|ABQ80841.1| inner-membrane translocator [Pseudomonas putida F1]
          Length = 359

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 55/330 (16%), Positives = 100/330 (30%), Gaps = 27/330 (8%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L     A +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +  
Sbjct: 37  LLPADHALQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYL 96

Query: 86  S----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                            W  +P     +      + L  L      L           + 
Sbjct: 97  MRQAAGDGLPGFMTFLSWTELPWYWAGTQHFAWALCLVVLAPGLLALVFGWFAFRSRIKG 156

Query: 136 ILIKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           +           AG+ +  R    +       S      F  +       ++ + + +  
Sbjct: 157 VYFSIMTQALTFAGMLLFFRNETGFGGNNGFTSFRTILGFDIAAQGTRAVLFLLTVALLL 216

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            S  +   L R+        +RD +             KL  + +S+   G+AGA +   
Sbjct: 217 ASLYLCWRLTRSKFGRLLTAVRDAENRMMFCGYDPRGFKLLVWVLSAVLCGLAGALYVPQ 276

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              I+P     + +I     V LGG  +L        ++ G+                 F
Sbjct: 277 VGIINPSEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------F 322

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             +F       +     LV L     ++ L
Sbjct: 323 TVAFPEFWLFFLGALFILVTLYLPKGVVGL 352


>gi|111222506|ref|YP_713300.1| ABC transporter permease [Frankia alni ACN14a]
 gi|111150038|emb|CAJ61733.1| Putative ABC transporter permease protein [Frankia alni ACN14a]
          Length = 806

 Score = 94.2 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 55/263 (20%), Positives = 102/263 (38%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
             ++ L  G       +       L  ++    + ++ G +G +SL       + AY+  
Sbjct: 377 LAVVALIPGVFLLSPALRDGLTNTLTGIVICLSIVVLTGYIGQISLAQTSFAGLSAYTVA 436

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
            L + +G    L I   A ++   G+++ LP+L+ RG +LAIATL  +     ++     
Sbjct: 437 SLSTHHGWPFPLPILAGAAVAVVAGVLVALPALRVRGVHLAIATLAFAVAVDKVVFANSW 496

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           I  G  G  V            +                      L +      ++  LR
Sbjct: 497 INGGYDGATVTTPSLIRSQDTTTHHVLGVAIGDGTQPNPLTLVFCLVVVVALGYLVANLR 556

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+        IR N++A  +    +   K+ AF VS+   G+ GA  A     ++PD F 
Sbjct: 557 RSLTGRQMLAIRSNERAAAAAGVNVAAVKVLAFGVSAFIAGVGGAVIAYRTGNVTPDKFL 616

Query: 263 FSENIIVISIVILGGMTSLSKIA 285
           + ++++  +   LGG+ S+S   
Sbjct: 617 YDKSLMFFAFAYLGGIASVSGAV 639



 Score = 42.2 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 40/345 (11%), Positives = 99/345 (28%), Gaps = 31/345 (8%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL------------ 68
           +  L + L  G  ++  +         +    A G+ +     G+++L            
Sbjct: 1   MALLAVILAKGDYRANFFSGGGFALGALVAAIALGVVVTYRGSGVVNLAGAAVAMYAAYV 60

Query: 69  -----NCVIAYAI----------GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113
                     +            G        S         +   A +     +++ L 
Sbjct: 61  YADLRAHGDLFLPPLPNPLAPIEGLVHLAGDDSFSVPHWPTSVSFGAAMGFWPALVLALV 120

Query: 114 SLKFRGDYLAIA---TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                G  L +A    L  + +   ++     +   +A +                +   
Sbjct: 121 FCALFGLVLHVAVFRPLRHAPVLAKVVASVGVLLFLQAVVVRRFSTTTQVVGPLPFVDKT 180

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
           +             +V+  +  L+ ++    +R+    A R   +N+K    L  +    
Sbjct: 181 QVDLGVFKITQEQLFVVCLVLVLAVALWALFQRSRFGLAVRAAAENEKGATVLGFSADRL 240

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
             + + +S+   G+ G F A+    + P+    +  +  ++  ++GG TS      A   
Sbjct: 241 AAATWVLSTVVTGLLGIFVASVNSSVDPNTM-PALIVPAVTAALVGGFTSFGWTTLAAFG 299

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           L   V L   +                     + ++ +  V+ +R
Sbjct: 300 LGMQVSLVTFLGANESWFPKAGGLPVPGVDLLVPLVVIVAVLALR 344


>gi|281418381|ref|ZP_06249401.1| urea ABC transporter, permease protein UrtC [Clostridium
           thermocellum JW20]
 gi|281409783|gb|EFB40041.1| urea ABC transporter, permease protein UrtC [Clostridium
           thermocellum JW20]
          Length = 382

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 59/354 (16%), Positives = 117/354 (33%), Gaps = 33/354 (9%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           SIF  R++  D I+ LL VV  L             +  ++  + + Y + A G+ ++ G
Sbjct: 11  SIFKGRISANDIIITLLFVVLALAPLFL------SDFRTNLLGKFIAYAILALGIDLIWG 64

Query: 62  SLGLLSLNCVIAYAIGAYSYVIL-------------GSRYGLSIWLLIPVSAMISGACGM 108
             G+LSL   + + +GAY   +               S  G ++          +    +
Sbjct: 65  YTGILSLGHGVYFGLGAYCMAMYLKLEASNGKLPDFMSWSGQNVLPWFWKPFAYAPVAII 124

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
           +  L           +      +     ++                        + +   
Sbjct: 125 LSVLVPTVLALIIGYLTFKNRIKGVYFSILTQALSIIFVVLFVGQQAYTGGTNGITNFKT 184

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
            F FP S    ++ +YYV LG   L+     W+ ++ +      IRD++           
Sbjct: 185 IFGFPLSGFSTKVTLYYVALGFLILAFLFCRWIVQSRLGKVLIAIRDSENRARFSGYNPA 244

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
             K   + +S+   G+AGA F      ISP       ++ ++  V +GG  +L       
Sbjct: 245 IYKTFVYCISAGLAGLAGALFVPQVGIISPAEMGIVPSVEMVIWVAIGGRGTLVGSVIGA 304

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            ++  +  +                 SF    +  + I+   V++   + L  L
Sbjct: 305 ILVNSLKSMVSE--------------SFPAVWSYFIGISFIAVVIFMPYGLAGL 344


>gi|157363664|ref|YP_001470431.1| inner-membrane translocator [Thermotoga lettingae TMO]
 gi|157314268|gb|ABV33367.1| inner-membrane translocator [Thermotoga lettingae TMO]
          Length = 353

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 59/341 (17%), Positives = 124/341 (36%), Gaps = 7/341 (2%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+   K +    ++  +   LF     + +Y+  +   I I ++F+  L+++ G  G+ S
Sbjct: 5   LSFRVKFISTFVLICLIAFLLFFANRIASEYVILILNLIAINIIFSTSLTLINGITGIFS 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      AIGAY   +L           +    +       I  LP+    G  L  A  
Sbjct: 65  LGHAGFIAIGAYVSTLLTLPVEQKEMTFLIKPLIYPLNQIQISFLPATIIAG--LVAAGF 122

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                  ++ +    +     G+    R+        +            I      Y  
Sbjct: 123 GYVVAAPSLRLIGDYLAIATLGLGETIRIVANNAWSITN----GALGLKAIPPYTNIYWS 178

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
            G  F++  II  L +++   A + IR++  A  ++   +   ++ +F + S F G+ G+
Sbjct: 179 WGWAFITVLIIASLVKSSYGRALKAIREDPIAAKAMGINVFSHQVMSFVLGSFFAGVGGS 238

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A     I P  F F++   ++ + +LGG+ S+S      A+    +E    +   +  
Sbjct: 239 LWAHLITTIDPKSFTFTKTFEILIMAVLGGLGSISGAIIGAAVYTVGLEFLRFLESPFKI 298

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             + F          ++   L +++L     ++     S  
Sbjct: 299 GPILFP-GIPGMRMVVLSALLIILMLFWQRGIMGREELSWE 338


>gi|322391653|ref|ZP_08065121.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus peroris
           ATCC 700780]
 gi|321145464|gb|EFX40857.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus peroris
           ATCC 700780]
          Length = 318

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 82/340 (24%), Positives = 142/340 (41%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     L V   +L+ + + A     +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KANLAWLGLLVAGFILIQVLVLAGVLNLFYIQILEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+G  S    + +  + + A+ISGA  +I+G+P+L+ +GDYLA+ATL
Sbjct: 66  HAGFMAIGAYAAAIIGSKSPTYGAFFGAMLLGALISGAVALIVGIPTLRLKGDYLAVATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++EI +  +I    +TNG AGI                                    +
Sbjct: 126 GVAEIIRIFIINGGSLTNGAAGILGIPNFTSWPM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                L+    L   R+ I     ++R+++ A  S+       K+ AF   +    +AG+
Sbjct: 161 YIFAVLTTIATLNFLRSPIGRTTLSVREDEIAAESVGVNTTKIKIIAFVFGAITASIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     + P  + F  +I ++ IV+ GG+ S++    A  +L  +  L   +      
Sbjct: 221 LQAGFIGSVVPKDYTFINSINILIIVVFGGLGSITGSIVAAIVLGILNMLLQDV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  +AL LV++ R   LL     S 
Sbjct: 275 ---------ASVRMIIYALALVLVMIFRPGGLLGTWELSL 305


>gi|209520547|ref|ZP_03269304.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209499031|gb|EDZ99129.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 650

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 61/305 (20%), Positives = 134/305 (43%), Gaps = 33/305 (10%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+  + ++ILI V+FA  L  ++G  GL S      + +GAY   +      L +   +
Sbjct: 344 PYMPVLLVEILIAVLFATSLHFIMGPGGLHSFGHAAYFGLGAYGAALFLKVLNLPMEAAL 403

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +  +++    ++ G   ++  G YLA+ TL  ++I  +++ +W  +T G  GI      
Sbjct: 404 LLGPLLAVVGALVFGWFCVRLSGVYLAMLTLAFAQIVWSVVFQWDDVTGGSNGI------ 457

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                          +PS+++   +  YY+ L    L   ++  +  + +  A R  RD+
Sbjct: 458 ------------LGLWPSNWLSSPVAFYYLTLACAVLGVWLLRRMLFSPLGYAMRASRDS 505

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                ++   +   + ++F +++ F G+AG+ +A S+  ISP++   S ++  + +V+LG
Sbjct: 506 ALRAEAIGIDVKRVQWASFVIAALFCGLAGSLYAFSKGNISPEVISVSRSVDGLVMVLLG 565

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +LS      A+   + +       Y+                 L+  A+ L+++   
Sbjct: 566 GLQTLSGPIVGAAVFTWLQDTVARQTDYW---------------QALLGFAILLLVVAFP 610

Query: 337 HSLLR 341
             ++ 
Sbjct: 611 QGIVG 615



 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 92/307 (29%), Gaps = 18/307 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95
           + +         + A GLS++ G   +++      Y  G   AYS            WL 
Sbjct: 9   LVNGLADASTLFLVAAGLSLIFGVTRIVNFAHGSFYMFGIYVAYSIASRFGHTAGGFWLS 68

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  +A+     G ++ +  L+       +  L+ +     I         G   ++    
Sbjct: 69  VLAAALAVAVLGALVEIVVLRRIYQAPELFHLLATFALVLIFRDAALWLWGPDDLFGPRA 128

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                     +   +++    +   +   L RT      R    
Sbjct: 129 P----------HLAGAVDFLGHPLPTYDIALIVIGPVVLLLLWYALTRTRWGTLVRAATQ 178

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++   +L     +     F V +   G+ GA                        +V++
Sbjct: 179 DREMLGALGINQAWLFTGVFFVGAFLAGLGGALQGPRMSA--NLSLDLETIGNAFVVVVV 236

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S+     A  ++  +  LC G+      ++     S +        + + +V+++R
Sbjct: 237 GGMGSIPGAFVAALLIAEIKALCIGIGH---VTIFGIGLSLSRFTLVAEFVVMAVVLVVR 293

Query: 336 SHSLLRL 342
              LL  
Sbjct: 294 PWGLLGR 300


>gi|209519227|ref|ZP_03268029.1| urea ABC transporter, permease protein UrtB [Burkholderia sp. H160]
 gi|209500307|gb|EEA00361.1| urea ABC transporter, permease protein UrtB [Burkholderia sp. H160]
          Length = 544

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 82/291 (28%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ + +      L     +++     +        
Sbjct: 270 ITYGLIGVINMAHGEFLMIGAYATYVVQNLFQRFAPNLFDWYPLLAIPAAFVAAALVGIV 329

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     + +         +
Sbjct: 330 LER--LVLKHLYGRPLETLLTTFGVSLILIQATRMLFGAQNVQVVNPAWMSGGVTVLPNL 387

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     + A     L RT +    R +  N++    +          AFA 
Sbjct: 388 ILPYNRLAILAFSLIVVAIAWAVLTRTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 447

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  L+        L  V + 
Sbjct: 448 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTVLGGFGLGLVSKA 505

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 506 IEPFWGAVLAK-------------IAVLVLIVLFIQKRPQGMFALKGRSAE 543


>gi|284167063|ref|YP_003405341.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511]
 gi|284016718|gb|ADB62668.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511]
          Length = 386

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 58/287 (20%), Positives = 114/287 (39%), Gaps = 17/287 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             V   +      +      +    +  L +VMF      V G  G +S    + +AIG 
Sbjct: 29  IAVLAFISLALFPSVFPVLTVLQ-MVAALYFVMFVISWDFVSGYTGQVSFGHTLFFAIGG 87

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L   YG++  + + V   ++   G+++ LP+L+  G YLA+ TL+   I   +  
Sbjct: 88  YATTLLNLEYGVAPAVGVVVGVALAAIAGLLLSLPALRIEGHYLALFTLLPPLILLQVFQ 147

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            ++    G  G+  A+ L                   FV      YY+ L    L   + 
Sbjct: 148 MYRDTFGGSQGLRNAEPLID--------------AGDFVATANASYYLTLAAFVLVFGVT 193

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + R+     +  +++++ A  S+       K+ AF VS+A  G AGA F  +    + 
Sbjct: 194 WVITRSDTGAIFTAVKESEDAVTSVGINPNKFKVYAFVVSAAIGGFAGALFVHTPAGSAS 253

Query: 259 DMF--KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
                + S  I ++   I+GG  +++       ++   +E    +++
Sbjct: 254 PSQLLELSVMIEILLAGIIGGFGTITGAVVGGFLIYWGLEWFSRLDW 300


>gi|292494156|ref|YP_003533299.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haloferax volcanii DS2]
 gi|291369206|gb|ADE01436.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haloferax volcanii DS2]
          Length = 384

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 104/283 (36%), Gaps = 3/283 (1%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
            + I ILI+ +FA G ++++G  GLLS    + +   +Y+  +           +I V  
Sbjct: 62  GLAITILIWSIFALGFNLLLGQTGLLSFGHAMFFGTASYAAALFAIHVYNDPLAVIVVGT 121

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           + + A G +  L  L+    Y +I  L + +    +  +               R   LG
Sbjct: 122 LAAVALGAVAALILLRLHTVYFSIVALAIGQFLYFLAREPLVEITKGINGLEVPRSDVLG 181

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                            +    +Y  +        + I  +R++     ++ IR+N+   
Sbjct: 182 VFELEHQYG---GLLGELVVNNLYLFVGVFFVAVVASITRIRKSPYGLIFKAIRENETRT 238

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             +   +   K +AF +S+A +G+AG   A +      +   +S +  V+ + +LGG+ +
Sbjct: 239 AFVGLDVWRYKFAAFLLSAAIVGLAGGLMAVNTQFAGVERLYWSVSGDVVVMTVLGGLGT 298

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           L+     T +      +  G        LL    SF       
Sbjct: 299 LAGPVIGTFVFFYFKGIVNGFPTLGNYWLLLLSLSFTTVVWVY 341


>gi|114328150|ref|YP_745307.1| branched-chain amino acid transport system permease livM
           [Granulibacter bethesdensis CGDNIH1]
 gi|114316324|gb|ABI62384.1| branched-chain amino acid transport system permease protein livM
           [Granulibacter bethesdensis CGDNIH1]
          Length = 319

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 70/313 (22%), Positives = 127/313 (40%), Gaps = 16/313 (5%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVS 99
           ++ +  L   + A GL++V G  G LSL      AIGA++   +     G    + +   
Sbjct: 8   AVILPFLSLSIAALGLTVVTGRAGQLSLGTGAFMAIGAFAAYDLDAYVPGTPQLVSLLFG 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++ A G+++GLPSL+ RG YLA+ TL    +   +L                      
Sbjct: 68  GLVAAASGLVVGLPSLRLRGFYLAVTTLAAQFLVPWLLTNIGWF-------------SLD 114

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
             +        +  S      +        +  +  +++L L RT     W  +RD + A
Sbjct: 115 DPSGVLSAPVLKIGSFVFDTPVARAGFAAVVVVVLTAVLLRLSRTKAGRDWIAVRDMETA 174

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSENIIVISIVILGGM 278
              +   ++  KL+AFAVSS F G+AG  +A A    + P  F  + +  ++ IVI+GG 
Sbjct: 175 ATVVGVPVLRTKLTAFAVSSFFCGVAGVLWAFAYLRTVEPAGFDLNLSFRILFIVIIGGA 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S       TA ++ +  L   +  Y    ++      N+    +  + + L+++     
Sbjct: 235 GSFVGAFFGTAFMVAMPLLLSRLADYIGGGVIDSGQLANIEKMLIGGL-IVLILIREPDG 293

Query: 339 LLRLRTPSNFLER 351
           L  L  P     +
Sbjct: 294 LSALLRPRQATRK 306


>gi|301062184|ref|ZP_07202866.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
 gi|300443696|gb|EFK07779.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
          Length = 361

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 69/330 (20%), Positives = 140/330 (42%), Gaps = 20/330 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  LL+   +       Y  S+   +    M A G+ +++G  GLL+L      A+GAY
Sbjct: 26  MILLLLVAFVVMPLLLDGYWISVATMVGYTAMGALGVQLLIGYAGLLTLGHAAFIAVGAY 85

Query: 80  SYVILGSRYGLS---------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           +  +L  ++              + I  + +++G   ++ GLPS K +G YL + T+   
Sbjct: 86  TSTMLVLQFPWPQFMLDAGLAYPVSILAAGVVAGFWSVLFGLPSAKVKGFYLILTTMAAQ 145

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            I  + ++       G  G   +     +                 +  E+ +Y+V+  +
Sbjct: 146 FITVDFVLTQYISQIGGRGQAFSLPPGTIKIGPW-----------VIDTELSIYFVMAVL 194

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L   ++  L R+    AW  IRDN  A  +L   II+ KL AF V+    G+AGAF+ 
Sbjct: 195 LSLMIIVLANLLRSKPGRAWVAIRDNDIAAEALGINIIWYKLLAFFVAGFMAGVAGAFWV 254

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            +   +SP+ F++  ++ ++ ++++GG+ S+      +  ++ V+EL         +   
Sbjct: 255 CNTAALSPEHFQWFLSLWLVGVILIGGVGSIQGAVFGSIFMVVVMELLQLAVIPLADYFP 314

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +    F         +A+   ++   + L 
Sbjct: 315 QLLMDFAYIKDMAFGLAICAFLIYEPNGLA 344


>gi|229591416|ref|YP_002873535.1| putative ABC transporter membrane protein [Pseudomonas fluorescens
           SBW25]
 gi|229363282|emb|CAY50384.1| putative ABC transport system, membrane protein [Pseudomonas
           fluorescens SBW25]
          Length = 336

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 60/337 (17%), Positives = 120/337 (35%), Gaps = 30/337 (8%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            L   K      LL V+  L+       +       ++  +ILI+ M A   ++++G  G
Sbjct: 6   PLPFAKTQSRAMLLWVLAVLIGLPLTLPSA------TLATEILIFAMAALACNLLLGYTG 59

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           LLS    I +  GAY   +L     L ++  +  +A+  G   +++G  +++  G Y  +
Sbjct: 60  LLSFGQGIFFGAGAYCAALLMIHLQLGLFTALLGAAIAGGFLALLVGALAIRRTGIYFVM 119

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL  S++   +       T G  G+    R           IR        +      Y
Sbjct: 120 LTLAFSQMAYFVAYTLSDWTGGDNGLLSVPRPE---------IRLGDTVLLSLADARAFY 170

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +  +  L       +  +   +    IR+N+    ++       K+  F +S A  G+
Sbjct: 171 GFVAVLFLLIFIGARRVIASPFGSTLMAIRENETRASAIGYDTRHFKILVFVLSGAVTGI 230

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA +A     +       + +  ++ + I+GG  SL         ++ + +    +   
Sbjct: 231 AGALYAMLLHFVPLSNIDLAMSENILIMTIVGGTGSLFGSLLGAGSIVLLGDFLSDLWPR 290

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +                 L+ + L LV++     L  
Sbjct: 291 W---------------LMLLGVILILVVIFMRGGLWG 312


>gi|288961429|ref|YP_003451768.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288913737|dbj|BAI75224.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 351

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 77/344 (22%), Positives = 131/344 (38%), Gaps = 16/344 (4%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
                +          +  ++ +  L    S+   D++    L   +   GL+I+ G  G
Sbjct: 10  PAAAPRRVSPALPGIALLLIVAYGVLPLVGSEYLFDAILTPFLALALAGLGLNILTGYAG 69

Query: 65  LLSLNCVIAYAIGAYSYVILGSR-YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
            +SL      A+GAY+   L  R  G+   L I ++ +I+ A G++ GLPSL+ RG YLA
Sbjct: 70  QVSLGSSAFMAVGAYAAYNLALRLPGVPFLLDILLAGLIAAAVGLLFGLPSLRLRGFYLA 129

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           ++TL      Q I  K    +N      V                        +      
Sbjct: 130 VSTLAAQFFVQWIFNKVGWFSNDSPSGIVTVPPL-------------SVAGFTLDSSAGR 176

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           Y   LG+       +  L  +    A   +RD++ A   +   ++  KL AFAVSS  IG
Sbjct: 177 YLFALGVVTAVTLAVWRLVESPTGRALVALRDHETAARVIGIPVLRVKLLAFAVSSFIIG 236

Query: 244 MAGAFFA-ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           +AG  +A A    + P  F    +  ++ IVI+GG+ SL       A+++    L   + 
Sbjct: 237 VAGVLWAFAYLRTVEPAGFNLDRSFQILFIVIIGGLASLRGAFLGAALIVVFPLLLARLG 296

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                 L        M    ++ + +   ++     L  L   +
Sbjct: 297 EALLGGLFDSGV-LEMSQRIVLGLLIVTFLIAEPAGLTALLDRT 339


>gi|126731897|ref|ZP_01747701.1| branched-chain amino acid ABC transporter, permease protein
           [Sagittula stellata E-37]
 gi|126707724|gb|EBA06786.1| branched-chain amino acid ABC transporter, permease protein
           [Sagittula stellata E-37]
          Length = 619

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 48/315 (15%), Positives = 122/315 (38%), Gaps = 34/315 (10%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
              + +++  + I +L++ +FA  L  ++G+ G++S      +  GAY+  +L       
Sbjct: 326 PLFADRFVLILLIDMLVFALFAASLHFILGTGGMVSFGHAAFFGGGAYAAALLVYHLETP 385

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + +    + + +G   + +G   ++  G Y A+ TL  S++  ++  +W+ +T G  G+ 
Sbjct: 386 MEIAFLFAPLAAGLLALGIGWFCIRLSGVYFAMLTLAFSQLVWSMAYQWRDLTRGDDGLV 445

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                               +P+S++      YY  L        ++  +  +    A R
Sbjct: 446 NI------------------WPASWLSGTTPFYYFTLAFGVGGILVLRHIIHSPFGYALR 487

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
             RD+ +   ++   +   +  AF ++    G+AG  F  S+  + P   +   +   + 
Sbjct: 488 AGRDSPRQAEAMGINVKRVQHVAFGLAGVMAGLAGGIFVFSKGSVFPTELEIGASFDALI 547

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +V LGG+ +L+        +  V +    +                     ++ + +  V
Sbjct: 548 VVFLGGVKTLAGGVVGAGFMTVVEDWLTRL----------------EYWRLVLGLVIIAV 591

Query: 332 ILMRSHSLLRLRTPS 346
           +++    ++     +
Sbjct: 592 VIIAPEGIVGTLRST 606



 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 98/308 (31%), Gaps = 28/308 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96
           + +         + A GLS++ G   +++      Y +GA+  V  +      +  W  I
Sbjct: 8   LLTGLANACSLFLVASGLSLIFGVTRIVNFAHGSFYMLGAFVGVTLMQVLPGAMGFWGAI 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ ++ GA G  + +  L+       +  L+ +     ++     +  G          
Sbjct: 68  LLTGLVVGAIGAFVEMVVLRPIYRAPELFQLVATFGVILVIQDLALMVWGAEDRMGPRAP 127

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G           +         +   ++     +  ++   + +T +    R    +
Sbjct: 128 GLRGV----------WRIFGEPVPKYDLVIIAITPLILFALWYLITKTRVGVLVRAATQD 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +L     +     FA+ SA  G  GA            +  F+       +V++G
Sbjct: 178 REMVGALGVNQAWLFTGVFALGSALAGWGGALQLPKGGA--DLLMDFNIIGAAFVVVVIG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM SL     A  ++  +                            LM + + +V+++R 
Sbjct: 236 GMGSLPGAFIAAVLISVLNVFGVTY--------------LPQSTLVLMFVVMAVVLIIRP 281

Query: 337 HSLLRLRT 344
           + LL    
Sbjct: 282 YGLLGREE 289


>gi|289522282|ref|ZP_06439136.1| branched-chain amino acid transport protein [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289504118|gb|EFD25282.1| branched-chain amino acid transport protein [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 330

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 63/323 (19%), Positives = 123/323 (38%), Gaps = 24/323 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+  + +   +       +   + +  L++   +   +I+ G  G +S    + + IGAY
Sbjct: 14  VLLLIAVLPLIPGPLQSPFAQHVLVLTLLFACMSQAWNILGGYCGQVSFGHSVFFGIGAY 73

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +    YGL+ W    + A+++    +I+  P  + +G Y AIAT  + EIF  + + 
Sbjct: 74  GAGMAVVTYGLTPWPGAIIGALLAAIVSLIISYPCFRLKGHYFAIATFAIVEIFNRLFMV 133

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W  +       Y      +                 +   +   YY   G+  L  S + 
Sbjct: 134 WYWVGGALGLDYPIIEEGWKNFM-------------WFQTKTQYYYGAFGLFILIFSFVR 180

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           W+    +    + +RD Q+A  +L       KL+A A+S+    + GAFF     R+ P 
Sbjct: 181 WMEVNKLGYYLKAVRDGQEAAEALGVNSTAVKLTAIAISAFLAALCGAFFVQYNLRVDPP 240

Query: 260 M-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           M      ++  + I ILGG+ +        AILI + E    +       +         
Sbjct: 241 MVMSLDMSMRFVLITILGGLGTFWGPLLGAAILIPLQEYSRAIWGGLGGGV--------- 291

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
               +  I + L++  +   ++ 
Sbjct: 292 -DLIIFGILIVLIVTRQPKGVMG 313


>gi|167841876|ref|ZP_02468560.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia thailandensis MSMB43]
          Length = 337

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 56/312 (17%), Positives = 123/312 (39%), Gaps = 18/312 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+++  +L   AVV  L L L  G         S+  ++L++ + A G ++++G  GLLS
Sbjct: 25  LHRHRHVLLAAAVVCALPLVLRSG---------SLATEVLVFALAALGCNLLLGYTGLLS 75

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
               + + +G+Y+  ++ +R   S+ + +  +  +  A   ++G  S++ RG Y  + TL
Sbjct: 76  FGQGVFFGLGSYAAGLVLTRGVPSVPVALAAAIALGAAAAALVGWFSIRQRGTYFVMLTL 135

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              ++F  +      +T G  G+    R                     +      Y  +
Sbjct: 136 AFGQLFYFVAYTTPELTGGDNGLLDIPRPALGAL---------GRTLVPLDSPWQYYGFV 186

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +   +  ++  + ++        IRDN+    +    +   KL AF +S A  G+AGA
Sbjct: 187 AALFIAAFWLMARVSQSVFGRTLLAIRDNEARAAAAGYDVKRFKLVAFVISGAVTGLAGA 246

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A            +  + +++ + ++GG  +L       A  +   +    +   +  
Sbjct: 247 LHALMTGIAPLSNIDYHTSEMILVMTVIGGTGNLFASVLGAAFYVLFADWLSTLWPRWLL 306

Query: 308 SLLKFDCSFNMR 319
            L     + ++ 
Sbjct: 307 LLGLALIAVSLF 318


>gi|163859061|ref|YP_001633359.1| putative branched-chain amino acid transport system permease
           [Bordetella petrii DSM 12804]
 gi|163262789|emb|CAP45092.1| putative branched-chain amino acid transport system permease
           [Bordetella petrii]
          Length = 354

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 79/343 (23%), Positives = 139/343 (40%), Gaps = 23/343 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +R ++      +   +   + F+ +    S   + ++ I  LI  + A GL+I+VG
Sbjct: 18  QIFPIRQDR------IFIGLLLAVAFVAVPLLASDYLLRAILIPFLILSLAAVGLNILVG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGD 120
             G +SL      A+GAY+    G R+     ++ I +    +   G++ G+PSL+ RG 
Sbjct: 72  YCGQISLGTGAFMAVGAYAAWNFGVRFPGMPLVVQILLGGCFATLVGVLFGIPSLRIRGL 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL          ++    TN      V+                       +   
Sbjct: 132 YLAVATLAAQFFVDWAFLRIAFFTNYSPSGSVSVPPLTAF-------------GLPIDTS 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y  +L    + A +   L R AI   W  IRD   A   +    ++AKL+AFAVSS 
Sbjct: 179 LQRYLFVLVFVVVFALLAKNLVRGAIGRQWMAIRDMDVAAAVIGIRPMYAKLTAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            +G+AGA +         P  F  + +  ++ +VI+GG+ S+       A ++ V     
Sbjct: 239 IVGVAGALWGYIHLGSWEPLAFDLARSFQLLFMVIIGGLGSIMGGFFGAAFIVLVPVALT 298

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +   ++  L     +       +    +   ++   H L RL
Sbjct: 299 NV--PHWLGLSLSVDTAAHIEHMVFGALIVFFLIAEPHGLARL 339


>gi|330815765|ref|YP_004359470.1| Branched-chain amino acid ABC transporter, permease protein
           [Burkholderia gladioli BSR3]
 gi|327368158|gb|AEA59514.1| Branched-chain amino acid ABC transporter, permease protein
           [Burkholderia gladioli BSR3]
          Length = 537

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 83/291 (28%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ + +            +++     +        
Sbjct: 263 ITYGLIGVINMAHGEFLMIGAYATYVVQTLFQRYAPGAFDWYPLVAVPASFVAAALVGIV 322

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +  +  S +         +
Sbjct: 323 LER--TVLKHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVSNPSWMSGGVTLMQNL 380

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L+    + A     L RT +    R +  N++    +          AFA 
Sbjct: 381 ILPYNRIAILVFSLMVVAIAWGVLTRTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 440

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          +  I     V+LGG+  ++        L  V + 
Sbjct: 441 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVVGGFGLGLVSKA 498

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 499 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 536


>gi|311106030|ref|YP_003978883.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310760719|gb|ADP16168.1| inner-membrane translocator 36 [Achromobacter xylosoxidans A8]
          Length = 298

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 73/311 (23%), Positives = 137/311 (44%), Gaps = 17/311 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ ++ I ILIY++ A+GLS+  G  GL++   V  +AIGAY+  +L  +      + +
Sbjct: 3   AYLIAIAIGILIYMLLAFGLSLHYGFTGLINFGHVGFFAIGAYTSALLSLKGVPIP-ISM 61

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +A ++      +G+ +L+   DYLAI TL  SE  + +L   + +T G  G+    RL
Sbjct: 62  VAAAAVAALAAWPLGMIALRLGSDYLAIVTLGFSESVRMMLQTEEWLTRGMHGLPGIPRL 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           +                 S    ++++  +L+ +   +  +I  + R+        +RDN
Sbjct: 122 FAGWA-------------SPQTVDLWIMLLLVAVNAGALLLIHLVIRSPFGRVIEAVRDN 168

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  +L       K  +  + +   G+AGAF A     ISP+ F       +   +ILG
Sbjct: 169 EVAVRALGKDPARFKTRSLMLGAGLAGLAGAFQAHYLTFISPEQFVPLITFYIWIAIILG 228

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+  LS +   T +L+G +E    +  +        +         ++ +AL  V+L R 
Sbjct: 229 GVGRLSGVVAGTVLLVGFLEGSRFVRDFVGGIS---EVQMASVRIGVIGLALICVVLYRP 285

Query: 337 HSLLRLRTPSN 347
             +    + + 
Sbjct: 286 QGIFGNTSATR 296


>gi|170693061|ref|ZP_02884222.1| inner-membrane translocator [Burkholderia graminis C4D1M]
 gi|170142059|gb|EDT10226.1| inner-membrane translocator [Burkholderia graminis C4D1M]
          Length = 650

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 65/324 (20%), Positives = 142/324 (43%), Gaps = 33/324 (10%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           LA +  L+L L      +  Y+  + ++ILI V+FA  L  ++G  G+ S      + +G
Sbjct: 325 LAAIMLLVLLLAPLLANAFPYMPVLLVEILIAVLFATSLHFIMGPGGMHSFGHAAYFGLG 384

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   +      L +   + ++ +++    ++ G   ++  G YLA+ TL  ++I  +++
Sbjct: 385 AYGAALFLKVLNLPMEAALLLAPLLAVGGALVFGWFCVRLSGVYLAMLTLAFAQIVWSVV 444

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +W  +T G  GI                     +P+ ++   +  YYV L    +   +
Sbjct: 445 FQWDDVTGGSNGI------------------LGLWPADWLSSPVAFYYVTLVCAVIGVWL 486

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  +  + +  A R  RD+     ++   +   + +AF ++S F G+AG+ +A S+  IS
Sbjct: 487 LRRMLFSPLGYAMRASRDSVLRAEAIGIDVKRVQWAAFVIASLFCGLAGSLYAFSKGTIS 546

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P++   S ++  + +V+LGG+ +L+      A+   + +       Y+            
Sbjct: 547 PEVISVSRSVDGLVMVLLGGLQTLTGPIVGAAVFTWLQDTVARQTDYW------------ 594

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                L+  A+ L+++     ++ 
Sbjct: 595 ---QALLGFAILLLVIAFPQGIVG 615



 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 93/307 (30%), Gaps = 18/307 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95
           + +         + A GLS++ G   +++      Y  G   AYS            WL 
Sbjct: 9   LVNGLADASTLFLVAAGLSLIFGVTRIVNFAHGSFYMFGIYIAYSIASRFGHTAGGFWLS 68

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  +A++    G ++ +  L+       +  L+ +     I         G   ++    
Sbjct: 69  VLAAALVVATLGALVEVIVLRRIYQAPELFHLLATFALVLIFRDAALWLWGPEDLFGPRA 128

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                     +   +++    +   +   L RT      R    
Sbjct: 129 P----------HLAGAVNFLGHPLPTYDIALIVIGPVVLLLLWYALTRTRWGTLVRAATQ 178

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++   +L     +     F V +   G+ GA                        +V++
Sbjct: 179 DREMLGALGINQAWLFTGVFFVGAFLAGLGGALQGPRMSA--NLSLDLESIGNAFVVVVV 236

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S+     A  I+  +  LC G+      ++     S +        + + +V+++R
Sbjct: 237 GGMGSIPGAFVAALIIAEIKALCIGIGH---VTIFGVGLSLSRFTLVAEFVVMAVVLVVR 293

Query: 336 SHSLLRL 342
              LL  
Sbjct: 294 PWGLLGR 300


>gi|197121846|ref|YP_002133797.1| inner-membrane translocator [Anaeromyxobacter sp. K]
 gi|196171695|gb|ACG72668.1| inner-membrane translocator [Anaeromyxobacter sp. K]
          Length = 368

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 68/346 (19%), Positives = 145/346 (41%), Gaps = 19/346 (5%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
             R  +   ++ LL  +  +           + Y+  MG+ + + V+     ++V G  G
Sbjct: 10  PSRAPRGFSVVGLLVFLAVVAALAVFPQFVKKPYVLHMGVLLFLAVIQGQAWNVVGGYAG 69

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
             S+     + +GAY  V+L     ++ W  +  +   S    +++G  + + RG Y  +
Sbjct: 70  QYSVGHAAYFGVGAYVTVMLLEVNKIAPWWGVWAAMAASVLLSLVIGSITFRLRGPYFVL 129

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           A++ ++EI +   + +K +T G  G  + +           +    R            Y
Sbjct: 130 ASISVAEIIRLATLYFKDLTRGAEGFLLGEIPTLNLFGNEIMFFGKR----------PFY 179

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           +V LG+  ++ ++   ++ + +   ++ IR++Q A  SL   + F K  A ++S+AF  +
Sbjct: 180 FVGLGLAVVAVAVNWIVQHSKLGYYFQAIREDQDAAHSLGINLSFYKNVALSISAAFTAL 239

Query: 245 AGAFFAASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           AG F+A     I P+  F    ++ ++ + I+GG+ ++        +L+ + E+      
Sbjct: 240 AGGFYAMFVKFIDPNTVFGLDVSVQIVLLCIIGGIGTIVGPVIGAVVLVPLSEILRNPKG 299

Query: 304 YYFNSLLKFDCSF--------NMRHTTLMVIALFLVILMRSHSLLR 341
                +L  D  F        +  H  +  I + LVIL     +L 
Sbjct: 300 LVQVGVLSPDSGFVTFVERYLSNAHLLVYGILVVLVILFAPEGVLG 345


>gi|121611517|ref|YP_999324.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121556157|gb|ABM60306.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 316

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 62/295 (21%), Positives = 123/295 (41%), Gaps = 12/295 (4%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
               +    V   L     L A   Q++   +  ++LIY + A  L++++G  G++S   
Sbjct: 2   KRGAIASFLVGLGLAALPVLLAAAGQEFYLGLLTRVLIYALAATSLNLLLGYGGMVSFGH 61

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                IG Y   I       S W+  P++  I    G +MG  SL+ RG +  + TL ++
Sbjct: 62  AAFLGIGGYVVAIAAQHGVGSAWVAWPLALAIVALLGAVMGAISLRTRGVHFLMITLALA 121

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           ++F  + +  +    G  G+ +A R  F             F           YY+ L +
Sbjct: 122 QMFYYVFVSLRS-YGGDDGLSMARRSSFGWEAWWPTGGDMGF-----------YYLALVL 169

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L+  ++  L  +   +    +R+N+    ++   +   KL AF +++   G+AG    
Sbjct: 170 LALALLVLHRLIPSRFGSVLIGVRENETRMSTIGFPVYRYKLVAFVIAAVLCGLAGVLNV 229

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
                ISP +  +S++ +++ +VI+GG+          A+ +G+ E+       +
Sbjct: 230 ELNRFISPSVMHWSQSGMLMVMVIIGGLGRPWAGVVGAAVFLGLEEVLSHYTERW 284


>gi|254557556|ref|YP_003063973.1| branched-chain amino acid ABC transporter, permease protein
           [Lactobacillus plantarum JDM1]
 gi|254046483|gb|ACT63276.1| branched-chain amino acid ABC transporter, permease protein
           [Lactobacillus plantarum JDM1]
          Length = 320

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 73/339 (21%), Positives = 137/339 (40%), Gaps = 43/339 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     + V+  +++           +I++M + I I V+ A GL++++G  G  SL 
Sbjct: 6   KTNMAWLGVMVIGFVVIDGLELIGVINSFIENMLVTIGINVILAVGLNLIIGFAGQFSLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+          +L + V  +I+    +I+G+P+L+ RGDYLAIAT+
Sbjct: 66  HAGFMAIGAYATGIMTQTMATPAGFYLSMIVGMVIAMVAAVIVGIPTLRLRGDYLAIATM 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +EI + ++   K                                  F I  +  +  +
Sbjct: 126 GAAEIIRILINNLKITNGAA--------------------------GLFNIPALASWATV 159

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  L+  I +    +    A   +RD++ A  ++       KL+AF   +A   + G+
Sbjct: 160 YVLMCLTTIITVNFIHSRGGRAVMAVRDDELAAGAMGINTTRWKLAAFVFGAATAAIGGS 219

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             AA    I+P  F    +I ++ IV+LGG+ S++    A  +L  +  +          
Sbjct: 220 LHAAYIQTIAPGDFNIMASIAILIIVVLGGVGSITGTFVAAIVLGALDTILQNF------ 273

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                          +  +AL L+++ +   LL     S
Sbjct: 274 ---------GTIRMIIYSLALILIMIFKPAGLLGTWEFS 303


>gi|269928618|ref|YP_003320939.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
 gi|269787975|gb|ACZ40117.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
          Length = 350

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 61/306 (19%), Positives = 119/306 (38%), Gaps = 27/306 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  S+  +I+I+ +F   L+++VG  GL SL     +  G Y+  +L  R  LS    +
Sbjct: 35  DYPLSVLTEIVIFSLFVMSLNLLVGYTGLPSLGHSAFFGTGGYAVALLAIRAHLSAVPAL 94

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V+ +   A  ++ G   L+  G Y  I TL ++++   I+  W+ +T G  G+    R 
Sbjct: 95  IVAVLAGIALALVTGPFVLRTSGAYFLILTLSLTQVLFGIVWLWRGMTGGDDGLPGVPRP 154

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                          F +  V      YYV+L +  ++ + + W+ R+        IR+N
Sbjct: 155 ELP------------FLTGLVGSWTNFYYVVLLVVAIAVATLWWIVRSGFGLTLVGIREN 202

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++    L     + K   + ++  +  +AG  FA  +  + P    +      + +VILG
Sbjct: 203 ERIVEGLGYPTWWTKYIVYILAGGYAALAGGLFAYFKGYVGPGQLSWLTAGEALVMVILG 262

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  +         +++ +          +                 ++ +   L +L   
Sbjct: 263 GAGTFWGPVLGATVVLLLRYEVSSFTQRWET---------------ILGLVFILAVLFLP 307

Query: 337 HSLLRL 342
             L RL
Sbjct: 308 EGLARL 313


>gi|328955200|ref|YP_004372533.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Coriobacterium glomerans PW2]
 gi|328455524|gb|AEB06718.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Coriobacterium glomerans PW2]
          Length = 293

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 50/310 (16%), Positives = 98/310 (31%), Gaps = 24/310 (7%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            +Y+        +Y + A G ++V G   +L+        +GAY      +  G   W+ 
Sbjct: 5   SQYLLGGISLGSVYAIIALGYTMVYGIAKMLNFAHGDIIMVGAYVSFSATTYLGAPGWVS 64

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
             ++  +    GM++   + +       +A LI +      L     +  G A  +    
Sbjct: 65  YLMAIALCAVLGMLIEGLAYRPLRHAAPLAVLITAIGVSYFLQNSAQLIWGAAPKHFTSL 124

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                 T            + +         +     +   ++ ++ RT    A R    
Sbjct: 125 ASVPVLT----------HLTGLPISEVSLITVFTCVAIMIGLMWFISRTRTGKAMRACSQ 174

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           + +A   +   +     + FA+ SA   +AG    +    + P        I   +  + 
Sbjct: 175 DAQAAQLMGINVNRTISTTFAIGSALAAIAGVLLCSYSPVLQPTT-GSMPGIKAFTAAVF 233

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ SL        +L  V  L          + + F               L +V+L+R
Sbjct: 234 GGIGSLPGAFIGGILLGVVEALAKAYLSSSLANSIVFG-------------VLIIVLLVR 280

Query: 336 SHSLLRLRTP 345
              LL  R P
Sbjct: 281 PAGLLGRRVP 290


>gi|220907669|ref|YP_002482980.1| urea ABC transporter permease UrtC [Cyanothece sp. PCC 7425]
 gi|219864280|gb|ACL44619.1| urea ABC transporter, permease protein UrtC [Cyanothece sp. PCC
           7425]
          Length = 398

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 49/328 (14%), Positives = 94/328 (28%), Gaps = 28/328 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL--- 84
                   Q +  ++  + L   + A G+ ++ G  G+LSL   I +A+G Y+  +    
Sbjct: 40  PPWLNAIGQSFRVNLLGRYLSLGIVALGIDLIWGFTGMLSLGHGIFFALGGYALAMYLQL 99

Query: 85  ----GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI-------F 133
               G          +            +            L  A L            +
Sbjct: 100 QLPEGQIPDFFPLYGVTELPAFWAPFYSLPFTIIAIIGIPTLVAAALGYLIFRNRIRGVY 159

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
            +IL +   I            +             F   +S    +   Y + +     
Sbjct: 160 FSILTQAALIVFFNFFNGQQKLINGTNGLKTDTTTIFGMVTSSDQVQSVFYALSVVFLVA 219

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           + ++  WL    I      IRD++             K+  FAVS+   G+AGA +    
Sbjct: 220 AYALCRWLTSGRIGRLLIAIRDDESRVRFSGYDPTDFKVLVFAVSAGLAGIAGALYTVQS 279

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             I+P     + +I ++  V +GG  +L        ++     L                
Sbjct: 280 GIITPKSMDIAFSIEMVIWVAVGGRGTLVGAILGDLVVNFAKSLLSE------------- 326

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
             F             +V+ +    L+ 
Sbjct: 327 -QFPEIWLFFQGALFLIVVTVLPGGLVG 353


>gi|221633379|ref|YP_002522604.1| branched-chain amino acid ABC transporter permease [Thermomicrobium
           roseum DSM 5159]
 gi|221155630|gb|ACM04757.1| branched-chain amino acid ABC transporter, permease protein
           [Thermomicrobium roseum DSM 5159]
          Length = 350

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 67/332 (20%), Positives = 130/332 (39%), Gaps = 27/332 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+  PL + L         Y  S+  +ILI+ +FA  L++++G  GL SL     +  G 
Sbjct: 14  AIGVPLAVLLLAAPAFLPTYPLSVLTEILIFSLFAMSLNLLLGYAGLPSLGHSAFFGTGG 73

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L    G+   + + ++ +   A  ++ G   L+  G Y  I TL ++++   I+ 
Sbjct: 74  YAVGLLAKYLGIPAPVALLIAVVAGVALALVTGPFVLRTHGAYFLILTLSLTQVLFGIVW 133

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W+ +T G  G+                     F    V      YY+ L +  ++   +
Sbjct: 134 LWRRVTGGDDGLPGIPTPKLP------------FLVGRVSDTANFYYLALVVVGIALLTM 181

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
            W+ R+    A   IR+N++    L       K +A+ ++  +  +AG  FA  +  + P
Sbjct: 182 AWIVRSPFGLALIGIRENERYLAGLGYPTWTLKYAAYTIAGGYGALAGGLFAYFKGFVGP 241

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
               +      + +VILGG  +        A+++ +                    +F  
Sbjct: 242 GQISWLLAGEGMVMVILGGAGTFWGPIIGAALVLLLR---------------YEVSAFTQ 286

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           R   ++ I   L +L+    ++RL      L 
Sbjct: 287 RWVMILGIVFILTVLLLPQGIVRLPDRIRQLR 318


>gi|134296670|ref|YP_001120405.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|134139827|gb|ABO55570.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia vietnamiensis G4]
          Length = 316

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           I +  +   +Y + A G ++V G LG+++        IGA   +   +            
Sbjct: 8   ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPQLGNV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +   I+      +G    +     L  A  +   I    +                
Sbjct: 68  ATLTIGLGIAAVVCACVGYTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    ++     + A ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFIVMAGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            ++      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        + L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVVLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFVVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|313897093|ref|ZP_07830640.1| branched-chain amino acid ABC transporter, permease protein
           [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312974540|gb|EFR40008.1| branched-chain amino acid ABC transporter, permease protein
           [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 316

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 73/327 (22%), Positives = 127/327 (38%), Gaps = 41/327 (12%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L A+    ++    GA     +     I   + +M A  L+++ G  G  SL      
Sbjct: 11  MLLFALAVYGVIMGLTGAGVLSAFWQLNLIFAGLNIMLAASLNLINGYTGQFSLGHAGFM 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AIGAY  VIL + + L   + +      +G  G ++GLP+L+ RGDYLAIATL + EI +
Sbjct: 71  AIGAYVGVILTTNFHLPFIVALLAGGAAAGLLGALIGLPTLRLRGDYLAIATLGLGEIVR 130

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +I    +  G AG      L                              +  +   +
Sbjct: 131 IFIINVPYV-GGAAGFKGIPHLTNFT-------------------------WVFFIMLAT 164

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             II     +    A   IR+N+ A  ++       K+ AF + +AF G+AG  F  +  
Sbjct: 165 LFIIKNFVNSRHGRACLAIRENEIAAEAMGINTTRYKVLAFTIGAAFAGVAGVLFGHNMY 224

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            +SP  F F ++  ++ +V++GG+ S++       ++  +                    
Sbjct: 225 ILSPASFTFMQSFNILIMVVMGGLGSMTGSIAGALVVTFLSAALASF------------- 271

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  +AL L++  R   L  
Sbjct: 272 --PNARMIVYALALILMMFYRPQGLFG 296


>gi|291279353|ref|YP_003496188.1| branched-chain amino acid ABC transporter permease [Deferribacter
           desulfuricans SSM1]
 gi|290754055|dbj|BAI80432.1| branched-chain amino acid ABC transporter, permease [Deferribacter
           desulfuricans SSM1]
          Length = 311

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 67/304 (22%), Positives = 125/304 (41%), Gaps = 29/304 (9%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            +Y  S+   ILI  M A GL+I++G  G++SL     + IGAY   IL   Y  S    
Sbjct: 25  NEYYLSLISYILINAMLASGLNILLGYAGIISLCQASFFGIGAYLSGILTVHYSYSPIAT 84

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + + A+I+    +++  P+LK  G YLA+ATL    I      +    T G +G+     
Sbjct: 85  VFIGAIITFIVAILIAYPTLKLHGHYLAMATLGFGMIIYIFANELDIFTGGPSGLVGIPY 144

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
               G    + ++               Y +   +  ++  ++    ++ +S  +R IR+
Sbjct: 145 FSLFGFEFDTELKN--------------YALFAFLYLITVVLLELFDKSFLSYDFRFIRE 190

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  +        K+  FAV ++F  + G+F++     ISP     + +I ++++VI+
Sbjct: 191 SEHASSAFGIDFHKEKVILFAVIASFSSIIGSFYSFYSQFISPTSIGINYSIEILAMVII 250

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S         I+  + EL      Y                  +    L   I+  
Sbjct: 251 GGLGSTYGGIIGAIIISLIPELFASFEDY---------------EILIYGGILAFCIIFF 295

Query: 336 SHSL 339
            + +
Sbjct: 296 PYGI 299


>gi|313681075|ref|YP_004058814.1| amino acid/amide ABC transporter membrane protein [Oceanithermus
           profundus DSM 14977]
 gi|313153790|gb|ADR37641.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Oceanithermus profundus DSM 14977]
          Length = 356

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 69/307 (22%), Positives = 127/307 (41%), Gaps = 21/307 (6%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y   +   + I  + A GL+++VG  G +SL       +GAY+   L         L 
Sbjct: 56  PGYPVYVLTLVAIAAIGALGLNLLVGGAGQISLGQAAFLGVGAYAASHLAGPLA---PLG 112

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           I +  +++ A G+++GLPSL+ +G YLAIAT+    +   +   W+P+T G  G  +   
Sbjct: 113 ILLGGVVAAAIGVVLGLPSLRIKGVYLAIATMAFQFLALWVFNNWEPVTGGIRGRNLPPA 172

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                   R+                 ++Y++L            L  T    AW  +RD
Sbjct: 173 EVLGLELDRAER---------------LWYLVLAFAVPLFFYGKRLLATRAGRAWFAVRD 217

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N  +       +  AKLSAFA+S+ + G+AG   A     ++P+ F F  ++  +++VI+
Sbjct: 218 NDLSAQVAGVNLTLAKLSAFALSAFYAGIAGGLLANLYRSVTPEYFLFGISVQYLAMVIV 277

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  ++         ++ + EL   +   +                 +    + L +++ 
Sbjct: 278 GGAGTVLGAVLGAVFVMLIPELLNAVVGAFGPEYAAL---LAAWRNVVFGGLILLFLILE 334

Query: 336 SHSLLRL 342
              L+ L
Sbjct: 335 PLGLVGL 341


>gi|317046828|ref|YP_004114476.1| urea ABC transporter permease UrtB [Pantoea sp. At-9b]
 gi|316948445|gb|ADU67920.1| urea ABC transporter, permease protein UrtB [Pantoea sp. At-9b]
          Length = 521

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 86/288 (29%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY+  ++ S +       +    +++     ++       
Sbjct: 248 ITYGLLGVINMAHGEMLMLGAYATWLVQSLFQQFAPQWLAWYPLLALPVAFLVTAVMGMV 307

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 I   +     + +L  W         + +      L     + +         +
Sbjct: 308 LER--TIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNLEVANPNWLSGGMQVLPNL 365

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V++ +  +     L L +T +  + R +  N+              + AF +
Sbjct: 366 VLPYNRIAVIVFVFAVLGLTWLLLNKTRLGLSVRAVTQNRAMADCCGVPTGRIDMLAFGL 425

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+LGG+  L+    A   L  + ++
Sbjct: 426 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFGLGILNKV 483

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                    L+++ + L I  R   L   +  
Sbjct: 484 LEPQIGAVLGK-------------ILILVLIVLFIQKRPQGLFAFKGR 518


>gi|89053874|ref|YP_509325.1| inner-membrane translocator [Jannaschia sp. CCS1]
 gi|88863423|gb|ABD54300.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Jannaschia sp. CCS1]
          Length = 399

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 54/376 (14%), Positives = 125/376 (33%), Gaps = 33/376 (8%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGL 65
            +   I+  + V  P LL  F   +   ++      +  +++I+ +FA G +I+ G  G 
Sbjct: 9   ARLYLIVIGMLVFAPFLLNPFPETSGLAQFNAGYPDLMQKLVIFGIFAVGYNILFGLTGY 68

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           LS        IG+++ V +     +++   + ++ +++G   +++G  SL+  G Y +I 
Sbjct: 69  LSFGHAAFLGIGSFAGVWVMKLLTMNVIPALIIAMLVAGVFALVIGFVSLRRSGIYFSIL 128

Query: 126 TLIMSEIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           TL  +++  ++                     P   G +     +        +      
Sbjct: 129 TLAFAQMCYSLAYSVLTPITGGETGLTLSLDDPRILGVSQTESGNIPVPHLFGLDMASAT 188

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                ++       YY    +   +    + L R+      R I+ NQ            
Sbjct: 189 TIDVGAWNFTFSAGYYFAALIMAFAFYFSIRLFRSPFGLMLRAIKSNQTRMSYTGLNPRP 248

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
             L+AF +S  + G+AG    A       +   ++ +  V+ + ILGG  +L        
Sbjct: 249 YTLAAFVISGMYAGLAGGLMVAMDPLAGSERMLWTASGEVVLMTILGGAGTLIGPILGAG 308

Query: 290 ILIGVVELCCGMNFYYFNSLLK-------------FDCSFNMRHTTLMVIALFLVILMRS 336
           ++  +  +   +      +                            + +   LV++   
Sbjct: 309 VIAYLESIISTIGSTVLYNWFSGLPDGIANVLVNVIYPFVGSGWHLTLGLVFMLVVIFLP 368

Query: 337 HSLL-RLRTPSNFLER 351
             ++   +       R
Sbjct: 369 GGIVEGGKRIGGLFRR 384


>gi|322373955|ref|ZP_08048490.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus sp. C150]
 gi|321277327|gb|EFX54397.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus sp. C150]
          Length = 316

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 76/337 (22%), Positives = 137/337 (40%), Gaps = 42/337 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + I   L +   L+L     +     Y   + + I I ++   G ++V+G  G  +L 
Sbjct: 6   KVNLIWFGLIIGLFLILKGLELSGIMNLYYIQILMGIGISILMGLGTNLVLGFSGQFTLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAYS  I+          +L + V  +I+    +I GLP+L+ +GDYLAIATL
Sbjct: 66  QAGFMAIGAYSSAIITGMMPTYDGFYLSMVVGVIIAAVVALIFGLPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            M+EI + I++    +TNG AG+                                   V+
Sbjct: 126 GMAEIIRIIIVNGGELTNGAAGLTGILPYTSWP-------------------------VI 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                +   ++L   R+A      T+R+++ A  S+   +   K+  F + +    +AG+
Sbjct: 161 YFFVVIITILVLNFLRSATGRQAITLREDEIAAESMGVNVTKMKVLIFVIGAMISAIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            + +    + P  F   ++I  + I +LGG+ S++    A  +L  +      +      
Sbjct: 221 LYVSYIGTVVPKDFTIMKSIDYLIIAVLGGLGSITGTVIAAIVLGIINMFLQNV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                    +     +  +AL LV+L R   LL  + 
Sbjct: 275 ---------SNLRMIIYALALILVMLFRPSGLLGTKE 302


>gi|308181636|ref|YP_003925764.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Lactobacillus plantarum
           subsp. plantarum ST-III]
 gi|308047127|gb|ADN99670.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Lactobacillus plantarum
           subsp. plantarum ST-III]
          Length = 320

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 137/339 (40%), Gaps = 43/339 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     + V+  +++           +I++M + I I V+ A GL++++G  G  SL 
Sbjct: 6   KTNMAWLGVMVIGFVVIDGLELMGVINSFIENMLVTIGINVILAVGLNLIIGFAGQFSLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+          +L + V  +I+    +I+G+P+L+ RGDYLAIAT+
Sbjct: 66  HAGFMAIGAYATGIMTQTMATPAGFYLSMIVGMVIAMVAAVIVGIPTLRLRGDYLAIATM 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +EI + ++   K                                  F I  +  +  +
Sbjct: 126 GAAEIIRILINNLKITNGAA--------------------------GLFNIPALVSWATV 159

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  L+  I +    +    A   +RD++ A  ++       KL+AF   +A   + G+
Sbjct: 160 YVLMCLTTIITVNFIHSRGGRAVMAVRDDELAAGAMGINTTRWKLAAFVFGAATAAIGGS 219

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             AA    I+P  F    +I ++ IV+LGG+ S++    A  +L  +  +          
Sbjct: 220 LHAAYIQTIAPGDFNIMASIAILIIVVLGGVGSITGTFVAAIVLGALDTILQNF------ 273

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                          +  +AL L++L +   LL     S
Sbjct: 274 ---------GTIRMIIYSLALILIMLFKPAGLLGTWEFS 303


>gi|92118311|ref|YP_578040.1| ABC transporter related [Nitrobacter hamburgensis X14]
 gi|91801205|gb|ABE63580.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter ATP-binding protein 1,
           HAAT family [Nitrobacter hamburgensis X14]
          Length = 625

 Score = 93.8 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 55/300 (18%), Positives = 109/300 (36%), Gaps = 12/300 (4%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   ++        L+L  F+       +  +   +IL++ +F  G  I+ G  GLLS  
Sbjct: 3   KQRPLVIETLTALGLILAPFILPHLG--FAPNTINRILVWGLFGIGFDILFGFTGLLSFG 60

Query: 70  CVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
               Y  G +    +L       +   + +  + S A G ++GL +L+  G Y A+ T+ 
Sbjct: 61  QSAFYGTGGFVAAYLLTQAGFPHVVTSLFIGMIASAAVGYLVGLIALRRTGIYFAMITVA 120

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           ++E+F  +         G                         +          +Y  L 
Sbjct: 121 IAEVFFFVEFNPLADWTGGENGLPGVPTPHFDLGFADFQFNTSWS---------LYVFLA 171

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
              FL   + L + R+ +    R +R+N     ++   I   KL+AF +++A+ G AG  
Sbjct: 172 FWYFLGIVVGLRIVRSPVGTILRAVRENPMRASAVGHNIHSYKLTAFVIAAAYAGFAGGL 231

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
               +  + PD F F  +  ++ +  +GG  +L        + + + +            
Sbjct: 232 LGVMQAFMPPDAFMFHTSAELVMMTAIGGTGTLFGTLVGAGVWLFLQDFLQAALGLGAAW 291


>gi|297566830|ref|YP_003685802.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
 gi|296851279|gb|ADH64294.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
          Length = 356

 Score = 93.4 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 70/307 (22%), Positives = 131/307 (42%), Gaps = 20/307 (6%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            +Y   +  QILI  +   GL ++VG  G +SL       +GAY    L           
Sbjct: 55  PQYPLFVLTQILIAALAGLGLHLLVGGAGQISLGQAAFVGVGAYVSSHLSGNLA---PFG 111

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           I +  +++ A G+++G+PSL+ +G YLAI TL    +   I  +WK  T G AG      
Sbjct: 112 ILMGGVMAAAIGVVLGVPSLRIKGAYLAIGTLAFQFLADYIFRQWKGFTGGVAG------ 165

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                   R+L     F    +  +  ++Y+ L            L  T    AW  +RD
Sbjct: 166 --------RTLPADNSFLGLPLTDDRVVFYLSLLFALPLFFYAKRLLSTRAGRAWFAVRD 217

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N  +       ++ AKL+AFA+S+ + G+AG         ++P+ F  + +I  ++IVI+
Sbjct: 218 NDLSAQLSGVDLVRAKLTAFALSAFYAGVAGGILMHLIGTVAPENFTLAFSIQYLAIVIV 277

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  ++      +  ++ + E+   +   +    +      +   +    + + + +++ 
Sbjct: 278 GGAGTVLGAVLGSFFVVLIPEILSVIAGSFGPQYVA---QLSAWRSVAFGVLILVFLILE 334

Query: 336 SHSLLRL 342
              L+ L
Sbjct: 335 PRGLVGL 341


>gi|264680459|ref|YP_003280369.1| membrane protein [Comamonas testosteroni CNB-2]
 gi|299532980|ref|ZP_07046367.1| membrane protein [Comamonas testosteroni S44]
 gi|262210975|gb|ACY35073.1| Integral membrane protein [Comamonas testosteroni CNB-2]
 gi|298719204|gb|EFI60174.1| membrane protein [Comamonas testosteroni S44]
          Length = 354

 Score = 93.4 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 72/327 (22%), Positives = 136/327 (41%), Gaps = 17/327 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + ++     FL +    S     ++ I  +I  + A GL+I+VG  G +SL      A+G
Sbjct: 28  VILLVLAFAFLAIPFIASDYTFQAILIPFVIMSLAALGLNILVGYCGQISLGTAAFMAVG 87

Query: 78  AYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           AY+   +     G+ + + +    +++ A G++ GLPSL+ RG YLA+ATL        +
Sbjct: 88  AYAAYNLQARIEGMPLLVALLGGGVVAMAFGVVFGLPSLRIRGLYLAVATLAAQFFVDWL 147

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
             +   +TN  +   V+ +   +                        Y + L +  L   
Sbjct: 148 ATRAAWVTNNSSSGSVSAKPLAILGWAIDTPMEK-------------YLLCLAILCLLGL 194

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDR 255
               L R+++   W  +RD   A   +     +AKLSAFAVSS  +G+AGA +       
Sbjct: 195 AAKNLVRSSVGREWMAMRDMDVAAAVIGIRPTYAKLSAFAVSSFIVGVAGALWGFVHLGA 254

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
             P  F    ++ ++ ++I+GG+ S+       A  + +  L   +   ++  L     +
Sbjct: 255 WEPAAFSLDRSLQLLFMIIIGGLGSVVGSIFGAAFFVLLPLLLNQV--PHWLGLPLSTAT 312

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                  +    +   +++  H L +L
Sbjct: 313 ATYLEHMIFGALIVFFLIVEPHGLAKL 339


>gi|300768674|ref|ZP_07078571.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|300493766|gb|EFK28937.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
          Length = 320

 Score = 93.4 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 137/339 (40%), Gaps = 43/339 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     + V+  +++           +I++M + I I V+ A GL++++G  G  SL 
Sbjct: 6   KTNMAWLGVMVIGFVVIDGLELMGVINSFIENMLVTIGINVILAVGLNLIIGFAGQFSLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+          +L + V  +I+    +I+G+P+L+ RGDYLAIAT+
Sbjct: 66  HAGFMAIGAYATGIMTQTMATPAGFYLSMIVGMVIAMVAAVIVGIPTLRLRGDYLAIATM 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +EI + ++   K                                  F I  +  +  +
Sbjct: 126 GAAEIIRILINNLKITNGAA--------------------------GLFNIPALASWATV 159

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  L+  I +    +    A   +RD++ A  ++       KL+AF   +A   + G+
Sbjct: 160 YVLMCLTTIITVNFIHSRGGRAVMAVRDDELAAGAMGINTTRWKLAAFVFGAATAAIGGS 219

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             AA    I+P  F    +I ++ IV+LGG+ S++    A  +L  +  +          
Sbjct: 220 LHAAYIQTIAPGDFNIMASIAILIIVVLGGVGSITGTFVAAIVLGALDTILQNF------ 273

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                          +  +AL L++L +   LL     S
Sbjct: 274 ---------GTIRMIIYSLALILIMLFKPAGLLGTWEFS 303


>gi|27378296|ref|NP_769825.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351443|dbj|BAC48450.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 339

 Score = 93.4 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 60/302 (19%), Positives = 117/302 (38%), Gaps = 13/302 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L  +    +   L      K +    I+   Y +FA  L+++VG  GL S    + + +
Sbjct: 27  VLIALVAFAVLASLPLFTGSKALLDFVIRCSAYGLFATSLNLLVGYTGLTSFGHGMFFGL 86

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAYS+ ++  + GL I +    + +I+     ++G   ++ +  Y A  TL    +  + 
Sbjct: 87  GAYSFGLIMQKLGLPIPVAFVATLVITALIAAVIGAICVRLKEIYFAFVTLAFQMLIHST 146

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           ++ W   T G  G             +R  I    F    +   + +Y     +  L   
Sbjct: 147 ILSWASFTGGDQG-------------LRGGIPRPAFLGIDLSNHVHLYVTSCALLVLGLL 193

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  + ++      R IRDN      L   +  AKL+ F +++ F  M G   A      
Sbjct: 194 AMRQIAQSPFGYTLRMIRDNAARASFLGIDVWRAKLTVFVLAALFAAMGGMVMALFVSGA 253

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
            P+   ++ +   I I +LGG+++       T +L+ + +       Y+   L      F
Sbjct: 254 YPEFAYWTISGEAIFINMLGGVSTFLGPMVGTVLLLLLNDTVTRYTEYHGIVLGVVILFF 313

Query: 317 NM 318
            +
Sbjct: 314 AL 315


>gi|327438228|dbj|BAK14593.1| ABC-type branched-chain amino acid transport system, permease
           component [Solibacillus silvestris StLB046]
          Length = 312

 Score = 93.4 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 79/345 (22%), Positives = 145/345 (42%), Gaps = 42/345 (12%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++ +K      +LA+V   ++ L +     Q Y  +M I + I V+ A  L +++G  G 
Sbjct: 1   MKKSKIFWGYAVLALVIYAVVQLLISNGVIQFYYQNMFIAMCINVILAVSLHVIIGVTGQ 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
            S+      A+GAY   I   ++G+     I + A+++   G+++G+PSL+ +GDYLAIA
Sbjct: 61  FSIGHAGFLAVGAYISAICTMKFGMPFITAILIGAIVAALAGLLVGIPSLRLKGDYLAIA 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL  +EI + + +    +                                  +     + 
Sbjct: 121 TLGFAEIIRIVFVNTDYVGGAA---------------------------GLQVAHQSTWT 153

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
                 F++  +I     +    A  +IR+++ A  ++     + K+ AFA+ S F G+A
Sbjct: 154 YAFFATFITILVISNFTNSRHGRACISIREDEIAADAMGINTTYYKVVAFAIGSFFAGVA 213

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA +A +   I P  F F ++  ++  V+LGG+ SLS    A  +L  V           
Sbjct: 214 GAIYAHNYYIIQPTAFGFLKSFDILIFVVLGGLGSLSGSVIAAVLLTFVSTYLQ------ 267

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                     F      +  + L LV+L R   LL  +  + + +
Sbjct: 268 ---------DFPETRMIIYSLILILVMLYRPTGLLGSKEITAYFK 303


>gi|188581221|ref|YP_001924666.1| ABC transporter [Methylobacterium populi BJ001]
 gi|179344719|gb|ACB80131.1| ABC transporter related [Methylobacterium populi BJ001]
          Length = 827

 Score = 93.4 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 73/330 (22%), Positives = 136/330 (41%), Gaps = 31/330 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
                +  V+  L L        +  Y   +   + + V+   GL++++G  GL+S    
Sbjct: 6   RAPAAMPLVILALTLAGLGLVAGTSGYSHFVIALVALTVVAGTGLNVLLGLGGLISFGHA 65

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             YAIGAY+  IL  +     WL +P ++ +S   G  + +P+++ RG YLA+ T+    
Sbjct: 66  GFYAIGAYTSAILTLKGVS-FWLALPAASGLSALVGAALAVPAMRVRGPYLAMVTIAFGF 124

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           + ++ LI+   +T G+ G+ VA      G  +                   + ++ +   
Sbjct: 125 LVEHALIEGGELTGGQNGLVVATGPSLFGLPLAERD---------------LAWLAVIGA 169

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            LS      LR   +  A R +RD   A  SL    +  K +AFA+S+A  G+AGA    
Sbjct: 170 GLSLYGFHRLRHARLGQALRAVRDADVAAASLGFDPVRVKTAAFAISAALTGLAGAVLPP 229

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               I+P  F F+++I+ +  V++GG  ++        + + + E   G+  Y       
Sbjct: 230 LMLFIAPSSFPFTQSILFVLAVVVGGAGTVLGPLFGALVTVLLPEALAGLAEY------- 282

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                         +   +V+ +    L+ 
Sbjct: 283 --------RLLFFGLTTLVVLWLVPAGLVG 304


>gi|125974325|ref|YP_001038235.1| inner-membrane translocator [Clostridium thermocellum ATCC 27405]
 gi|256003455|ref|ZP_05428445.1| urea ABC transporter, permease protein UrtC [Clostridium
           thermocellum DSM 2360]
 gi|125714550|gb|ABN53042.1| urea ABC transporter membrane protein [Clostridium thermocellum
           ATCC 27405]
 gi|255992479|gb|EEU02571.1| urea ABC transporter, permease protein UrtC [Clostridium
           thermocellum DSM 2360]
 gi|316941472|gb|ADU75506.1| urea ABC transporter, permease protein UrtC [Clostridium
           thermocellum DSM 1313]
          Length = 382

 Score = 93.4 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 59/354 (16%), Positives = 117/354 (33%), Gaps = 33/354 (9%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           SIF  R++  D I+ LL VV  L             +  ++  + + Y + A G+ ++ G
Sbjct: 11  SIFKGRISANDIIITLLFVVLALAPLFL------SDFRTNLLGKFIAYAILALGIDLIWG 64

Query: 62  SLGLLSLNCVIAYAIGAYSYVIL-------------GSRYGLSIWLLIPVSAMISGACGM 108
             G+LSL   + + +GAY   +               S  G ++          +    +
Sbjct: 65  YTGILSLGHGVYFGLGAYCMAMYLKLEASNGKLPDFMSWSGQNVLPWFWKPFAYAPVAII 124

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
           +  L           +      +     ++                        + +   
Sbjct: 125 LSVLVPAVLALIIGYLTFKNRIKGVYFSILTQALSIIFVVLFVGQQAYTGGTNGITNFKT 184

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
            F FP S    ++ +YYV LG   L+     W+ ++ +      IRD++           
Sbjct: 185 IFGFPLSGFSTKVTLYYVALGFLILAFLFCRWIVQSRLGKVLIAIRDSENRARFSGYNPA 244

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
             K   + +S+   G+AGA F      ISP       ++ ++  V +GG  +L       
Sbjct: 245 IYKTFVYCISAGLAGLAGALFVPQVGIISPAEMGIVPSVEMVIWVAIGGRGTLVGSVIGA 304

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            ++  +  +                 SF    +  + I+   V++   + L  L
Sbjct: 305 ILVNSLKSMVSE--------------SFPAVWSYFIGISFIAVVIFMPYGLAGL 344


>gi|187922954|ref|YP_001894596.1| urea ABC transporter permease [Burkholderia phytofirmans PsJN]
 gi|187714148|gb|ACD15372.1| urea ABC transporter, permease protein UrtB [Burkholderia
           phytofirmans PsJN]
          Length = 549

 Score = 93.4 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 80/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ + +            +++     +        
Sbjct: 275 ITYGLIGVINMAHGEFLMIGAYATYVVQNLFQRFAPGAFDWYPLLAIPASFVAAGLVGIV 334

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     + +         +
Sbjct: 335 LER--LVLKHLYGRPLETLLTTFGISLILIQATRMLFGAQNVQVVNPAWMSGGVTVLPNL 392

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 393 ILPYNRLAILAFSLIVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 452

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  L+        L  + + 
Sbjct: 453 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTVIGGFGLGLISKA 510

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 511 IEPFWGAVLAK-------------IAVLVLIVLFIQKRPQGMFALKGRSAE 548


>gi|303231111|ref|ZP_07317851.1| branched-chain amino acid ABC transporter, permease protein
           [Veillonella atypica ACS-049-V-Sch6]
 gi|302514242|gb|EFL56244.1| branched-chain amino acid ABC transporter, permease protein
           [Veillonella atypica ACS-049-V-Sch6]
          Length = 336

 Score = 93.4 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 58/309 (18%), Positives = 122/309 (39%), Gaps = 19/309 (6%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y   + +  +I  +    +   +   G LSL      ++GAY   +L  +  L I 
Sbjct: 3   IFNPYYLQIVMFFIINAILGISIYFTLA-SGQLSLGAAGFMSVGAYVGALLSLKADLPIV 61

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + I V   ++    +I+GLP+ + +G YLAIATL   E+ + I +    +TNG  G+   
Sbjct: 62  VGILVGGFVAALVAVIIGLPTTRLKGLYLAIATLGFGEVVRVIFLNL-DVTNGALGLSGI 120

Query: 154 DRLYFLGTTVRSLIRFFRFPS--SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
             +    T     I         +     I    +LL +     +  + +  + +  A+ 
Sbjct: 121 PSIPQELTNFAYEIDIDGLMGIDAVAWGNIMAIIILLIVLIFIIAFCVRINNSRVGRAFA 180

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            I+ +  A   +   +++ K+ AF + +   G+ G  +A   + I+P  F + + + ++ 
Sbjct: 181 AIKADDHAAELMGINVVYYKMMAFIIGAFIAGIGGGLYAHITNFINPTDFSYHKVVQILL 240

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             + GG   +      + IL  + E+   ++ Y                  +    L ++
Sbjct: 241 FPVFGGSNVVWGSVLGSFILTLLPEVLRFLSDY---------------RDIIYGALLVIL 285

Query: 332 ILMRSHSLL 340
           + +R   +L
Sbjct: 286 MAVRPDGIL 294


>gi|255261356|ref|ZP_05340698.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Thalassiobium sp. R2A62]
 gi|255103691|gb|EET46365.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Thalassiobium sp. R2A62]
          Length = 356

 Score = 93.4 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 70/340 (20%), Positives = 132/340 (38%), Gaps = 32/340 (9%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------YG 89
           Y+ S+     IY +FA GL++  G  GL ++  V   A+GAY+Y +L +         +G
Sbjct: 10  YLLSLLTVGGIYAIFALGLNVQWGFAGLFNVGIVGFAAVGAYTYALLTTAESTFHYGGFG 69

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L + + + V+ + S     ++GL  ++ R DYLAIAT+ ++EI + IL     +TNG  G
Sbjct: 70  LPLPVGMFVAMITSALVAAVIGLICIRLRSDYLAIATIGIAEIIKLILKNETDVTNGPRG 129

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSF-------------VIYEIFMYYVLLGMCFLSAS 196
           I    R +   +  R    +                      ++      +L   ++   
Sbjct: 130 INKIPRTWEHFSEERFYSSWPLSWFGTPENWAAFFDGLPNWWWQPCFAGTILLFMYIIYR 189

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++   R +        IR+N+ A  +    +   ++ AF + +A +G  GA FA     I
Sbjct: 190 MLERARVSPWGRMMTAIRENEPAVRAAGKNVTARRVEAFVIGAAIMGFGGALFAQHLRLI 249

Query: 257 SPDMFK--FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            P           +V  ++ILGG  +         ++  +      M     + +     
Sbjct: 250 EPTNTFDPAKVTFLVWVMLILGGSGNNRGAMLGAFLIWTIWSASELMISGIIDLVGFVAQ 309

Query: 315 SF---------NMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           SF               L+ + + +++      +L    P
Sbjct: 310 SFDTTILETRAGFLRMMLIGVLMQVILQKFPEGILPEVRP 349


>gi|172059857|ref|YP_001807509.1| urea ABC transporter permease protein UrtB [Burkholderia ambifaria
           MC40-6]
 gi|171992374|gb|ACB63293.1| urea ABC transporter, permease protein UrtB [Burkholderia ambifaria
           MC40-6]
          Length = 539

 Score = 93.4 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/291 (11%), Positives = 77/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +              +++              
Sbjct: 265 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRHAPAAFDWYPLVAVPVSFAAAALVGIV 324

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 325 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 382

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 383 ILPYNRLAILAFALAVVFVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 442

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          +  I     V+LGG+  ++        L  V + 
Sbjct: 443 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 500

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +   +  S  
Sbjct: 501 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAPKGRSAE 538


>gi|301060257|ref|ZP_07201124.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
 gi|300445769|gb|EFK09667.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
          Length = 431

 Score = 93.4 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 53/328 (16%), Positives = 106/328 (32%), Gaps = 24/328 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +   LL  +    +    Y        LI VM    L+++ G +G  S +     A+G
Sbjct: 112 VLLHVALLYAVLHAWSDISAYRLLTLKFTLIAVMLTLSLNVINGYMGEFSCSHPGFMALG 171

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+     S + L +++   +         +   L  L      LA A   +     +  
Sbjct: 172 AYA----TSVFTLGLFVNDKIFGEALLPSVLGPFLFPLALIAGGLAAALGALLVAIPSFR 227

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +   +           +  F    V    R      ++        + +L        I
Sbjct: 228 TRGDYLAIISLAFMFIVKSLFENLEVVGGPRGMSSQPNWADLPTVFVWTVL-----CVWI 282

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           I    R+ +  A   +RD++ A  ++       K++ F  ++ + G+AG  FA     I+
Sbjct: 283 INNFVRSTMGKALNAVRDDETAADAMTVNTRRTKMTGFLFAAFWAGVAGGLFAHVLRFIN 342

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F       ++++V  GG+ S+         L  + E    +    +  +        
Sbjct: 343 PGTFGIQRLAEILAMVYFGGLNSVYGSILGAVSLSLLSEALRPLEILKWIIIPLLLIL-- 400

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTP 345
                        V++ R   L+  R  
Sbjct: 401 -------------VMIFRPTGLIAFREF 415


>gi|327399165|ref|YP_004340034.1| ABC transporter integral membrane subunit [Hippea maritima DSM
           10411]
 gi|327181794|gb|AEA33975.1| ABC-type transporter, integral membrane subunit [Hippea maritima
           DSM 10411]
          Length = 308

 Score = 93.4 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 74/323 (22%), Positives = 129/323 (39%), Gaps = 29/323 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+   + + L +G      ++ +M     I  +   GL+I+ G  G +SL       +GA
Sbjct: 6   AIAVFVAVMLLVGVVAKNPFVLNMLSVAAITSIVVIGLNILSGFAGQISLGHAGFVGLGA 65

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y   IL  ++GLS W+ + ++A I G   + +  P+LK +G YLA+ATL + EI   +  
Sbjct: 66  YISAILSIKFGLSPWISMFITAFIVGLVSLFVAYPTLKLKGHYLAMATLAIGEIIYMLAN 125

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               IT G  G+     L   G    +  +F              Y+ +  + F  A I 
Sbjct: 126 NLSSITGGHQGLVGIPMLSIGGFVFDNERKF--------------YFFIWVLVFAFAFIA 171

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +  +A   A +T    ++A  S        K+ AF +S  +   AG+ FA     ISP
Sbjct: 172 KNITSSAFGRALKTTNLAEQAALSFGINTHKYKIIAFVISCIYASFAGSLFAFYIGFISP 231

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F   ++I  + ++ +GGM S+         L  +  L   +  Y+             
Sbjct: 232 TSFSLLKSINYVVMMFVGGMGSIFGGLVMAVFLEVIPNLITSLQDYWP------------ 279

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
                  + L ++++     L  
Sbjct: 280 ---IFNGLLLVVMVMFMPEGLGG 299


>gi|326315642|ref|YP_004233314.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323372478|gb|ADX44747.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 372

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 72/318 (22%), Positives = 130/318 (40%), Gaps = 16/318 (5%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRY 88
           + A  +  + D++ +  L+  +   GL+++ G  G LSL      A+GA++ + +     
Sbjct: 51  VPALATPYWFDAILLPFLVLSLAGVGLNLLTGYAGQLSLGTAAFMAVGAFAALNLQLRVP 110

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           GL +   + +  + + A G++ GLPSL+ RG YLA+ATL      Q  L ++   T    
Sbjct: 111 GLPLPAGMLLGGLCATAVGLVFGLPSLRLRGFYLAVATLAAQFFVQWALTRFGWFTLDSR 170

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
              V      +G  V                    Y   L +  L  +    L  T    
Sbjct: 171 SGVVDAPALRVGPWVFD-------------TPAARYLFALTVVALLTAAAWRLVSTRTGQ 217

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRISPDMFKFSENI 267
            +  +RDN+ A   +   ++  KL AFAVSS  +G+AG  +A      + P  F    + 
Sbjct: 218 HFIAVRDNELAARVIGIPVLRTKLLAFAVSSFIVGVAGVLWAFVYLRTVEPAGFNLDRSF 277

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            ++ IVILGG+ +L       A+++ +  L   +  +    +        M    ++ + 
Sbjct: 278 QILFIVILGGLGTLRGAFLGAALMVALPLLLSRLGGWALGGVFDSGV-LEMVQRIVLGVL 336

Query: 328 LFLVILMRSHSLLRLRTP 345
           +   ++     L  L T 
Sbjct: 337 IIGFLIAEPEGLAALSTR 354


>gi|116750819|ref|YP_847506.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
 gi|116699883|gb|ABK19071.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
          Length = 335

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 67/343 (19%), Positives = 127/343 (37%), Gaps = 20/343 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +    L L       L  L         +  S  IQ L++ ++  G + + G  G + L 
Sbjct: 11  RDLPRLDLGIAAAVGLALLVFPFFPFSSFAMSTVIQFLMFSLYGMGWNTIGGYGGQVDLG 70

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 IGAY+  +   R+    W+ +PV  +I+ A   ++G    + +G Y AIAT+  
Sbjct: 71  LAQYLGIGAYATAVSMIRWNTPFWVSMPVGVLIAIAWCSVIGYSVFRLKGHYFAIATIAT 130

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           S + ++I   W+ +                     +      F   F   +   YY++L 
Sbjct: 131 SLVLKDIFEVWRFV-----------GAARGLEIPATRFSSPDFLHLFFTQDDTYYYIILA 179

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
             F+    + W R++ +    R+I+DN++   SL   + +AK+  +AV+  F+   G+F 
Sbjct: 180 FFFIGILYVNWFRKSRLGFQLRSIKDNEEVARSLGINVQWAKIKTYAVAVTFVSAVGSFH 239

Query: 250 AASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           A     I P+       +I++  + +LGG  SL        ILI +              
Sbjct: 240 ACYVKNIEPEDTMSLDISILIALMAMLGGAGSLWGPLIGAGILIPLKSYL--------KE 291

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            L            +    +  +  +    +  +       +R
Sbjct: 292 WLGARAGLVGIDLVIYGAIIMFISAVEPRGVWGIVERIRRRKR 334


>gi|85702844|ref|ZP_01033948.1| branched amino acid ABC transporter (permease) [Roseovarius sp.
           217]
 gi|85671772|gb|EAQ26629.1| branched amino acid ABC transporter (permease) [Roseovarius sp.
           217]
          Length = 320

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 52/320 (16%), Positives = 114/320 (35%), Gaps = 22/320 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +     + L             + + ++I ++      ++    G  SL  V+   +GAY
Sbjct: 1   MFLFGAVALIALPHGLSFSQQEILVFLVINILLVTSYRLLT-LTGEWSLGHVVIMGVGAY 59

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  +L    G+++ + + +  + S    +++  P  + +G Y  I +    EI + I  +
Sbjct: 60  ASALLTKELGVAVPVAMFLGGITSALLAVLLSFPLFRMKGFYFLIGSFAAGEIIRLIWKR 119

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           ++    G  GI   D +        S   F           +  YY    +      ++ 
Sbjct: 120 FREPFGGVRGISGIDPMPDFSLGFYSFDFFE---------PVSYYYFAGVIVLACLWVLW 170

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            + ++ +   +  +    K   +    +   +  AFA++S F G+AGA  A     ++P+
Sbjct: 171 RIEKSPVGLTFHAVHWQDKLAQASGVNLRAYRTLAFAIASGFAGIAGALQAHYVGTVNPN 230

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F     + V++  I+GG T+         +L  + E+                  F   
Sbjct: 231 SFDIEVMVFVLTWAIVGGTTTFYGPILGCVLLTVINEIVLR------------GMGFEQA 278

Query: 320 HTTLMVIALFLVILMRSHSL 339
              +    + L IL   + L
Sbjct: 279 RPLIYGAIMILSILFLPNGL 298


>gi|271964527|ref|YP_003338723.1| inner-membrane translocator [Streptosporangium roseum DSM 43021]
 gi|270507702|gb|ACZ85980.1| inner-membrane translocator [Streptosporangium roseum DSM 43021]
          Length = 376

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 61/333 (18%), Positives = 128/333 (38%), Gaps = 9/333 (2%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           +K  + + +L     L+          + +    G+  +   + A G++++ G+ G LS+
Sbjct: 3   DKPRRSVRILLRSAVLVAAAVAVPFYLEGFWLQAGLFAMSAAVGAIGINLLTGATGQLSM 62

Query: 69  NCVIAYAIGAYSYVILGSRYGLSI-------WLLIPVSAMISGACGMIMGLPSLKFRGDY 121
                 A GAYSYV   S  G  +        +   ++ + SG  G +    + + +G Y
Sbjct: 63  GHAFFLAAGAYSYVYFASEPGHGLAGLGLPTPVAAVLAVLTSGVAGGLFSPIAGRLKGAY 122

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           L IATL +  + Q++L    P+T G  G  V     F      S            +  +
Sbjct: 123 LGIATLALIFLGQHLLFNAGPVTGGFNGRPVPPMELFGFAFADSPALVVAQVPFGALERL 182

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
           +   +    C    +  +   R     A  TIRD++ A   +   +   +   F +SS +
Sbjct: 183 WFLGLAALACAALFARGVLTGR--PGRAMNTIRDHEIAAGVMGVPVARYRAGVFVLSSMY 240

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AG   A    R  P+ F    ++  ++++++GG+ S++        +  + +L    
Sbjct: 241 GGLAGVLLALVFQRTVPEYFGILLSLDYLAMIVIGGLGSVAGAVIGAVFISLLPQLLTRY 300

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +              +      ++    +V+++
Sbjct: 301 SDALPLVAEPGSGGVSPAEAARILYGAAVVVIV 333


>gi|33599219|ref|NP_886779.1| putative branched-chain amino acid transport system permease
           [Bordetella bronchiseptica RB50]
 gi|33575265|emb|CAE30728.1| putative branched-chain amino acid transport system permease
           [Bordetella bronchiseptica RB50]
          Length = 354

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 81/343 (23%), Positives = 140/343 (40%), Gaps = 23/343 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +R ++      +   +   ++F+ +  T S   + ++ I  LI  + A GL+I+VG
Sbjct: 18  QIFPIRQDR------IFIALLMAVIFVVVPLTASDYLLRAILIPFLILALAAVGLNILVG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGD 120
             G +SL      A+GAY+    G R+     +  I +    +   G+I G+PSL+ RG 
Sbjct: 72  YCGQISLGTGAFMAVGAYAAWNFGVRFPGMPLVAQILLGGCFATLVGVIFGIPSLRIRGL 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL          ++                     ++    +    F    V   
Sbjct: 132 YLAVATLAAQFFVDWAFLR-------------IPFFTNYSSSGSVSVPPMTFFGLPVQSA 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y ++LG   +   +   L R AI   W  IRD   A   +    ++AKLSAFAVSS 
Sbjct: 179 LEKYLLVLGFVVVFTLLAKNLVRGAIGRQWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            +G+AGA +         P  F  + +  ++ +VI+GG+ S+       A ++ V     
Sbjct: 239 IVGVAGALWGYVHLGSWEPLAFDLARSFQLLFMVIIGGLGSILGSFFGAAFIVLVPVALT 298

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +   +   L     +       +    +   ++   H L RL
Sbjct: 299 NV--PHLLGLSLSVDTAAHIEHMVFGALIVFFLIAEPHGLARL 339


>gi|116669719|ref|YP_830652.1| inner-membrane translocator [Arthrobacter sp. FB24]
 gi|116609828|gb|ABK02552.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Arthrobacter sp. FB24]
          Length = 446

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/341 (12%), Positives = 99/341 (29%), Gaps = 24/341 (7%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            +  ++   +  + A    +++            + +     L+  + + GLS++ G+ G
Sbjct: 128 KVTFSQTSNLSVIFAFGKGIVVQQQDFGQNLLNRLVAGLSFGLLLALASVGLSLIFGTTG 187

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           L +         GA       +        ++           +         R     +
Sbjct: 188 LTNFAHGEMVTFGAVLVFAFNAMSLPFWLAVVLALLGGGLFGYVQDAGLWKPLRRRGTGL 247

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
             +++  I   + +++                +   T      +        V       
Sbjct: 248 VPMMIVSIGLALAVRYV-----------IQFYFGGSTQQLPYAQSAEIQIGPVSISPNNL 296

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           + L+    + A I   L +T +  A R + DN     +    +       +        +
Sbjct: 297 WSLVISAVVIALIGFILLKTRLGKATRAVADNPALAAASGIDVDNVIRIVWVAGGMLASL 356

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            G  +A  R  ++ DM      +++ + V LGG+ ++      + I+   VEL       
Sbjct: 357 GGILWAYYRPGVTFDMGSQIL-LLIFAGVTLGGLGTVFGALIGSIIVGIFVELTTVFGLA 415

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                               +  + +V+L R   +L  R  
Sbjct: 416 ------------ADLKYVGALFIMIVVLLFRPQGILGRRER 444


>gi|328949249|ref|YP_004366586.1| ABC-type transporter, integral membrane subunit [Treponema
           succinifaciens DSM 2489]
 gi|328449573|gb|AEB15289.1| ABC-type transporter, integral membrane subunit [Treponema
           succinifaciens DSM 2489]
          Length = 296

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 94/306 (30%), Gaps = 21/306 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++        IGAY+   + +  G +  L + +
Sbjct: 8   LVNGLSLGSIYALIALGYTMVYGIVKLINFAHGDVMMIGAYTGYFVLTATGPTP-LGLVL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +     ++ +   +     L  A  +      N LI    +               
Sbjct: 67  AFLGAMVVCAVLSIAIERCAYRPLRTAPRL------NSLITAIAVELILQNAMRVLPFVG 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +    F    V        V++    L   +   +  T    A R +  +  
Sbjct: 121 PNPRQFPTMETKFFTFGSVQISNIQLIVIISSAVLMVILNYIINYTKTGRAMRAVSYDLG 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       F + S   G  G  +A +  ++ P M      +      +LGG+
Sbjct: 181 AASLMGVNVNRTIAITFVIGSVLAGAGGVLYATAYPQVDPFMGYI-PGLKAFVAAVLGGI 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL     +        +   + +               L +++L++   
Sbjct: 240 GSIPGAMVGGVILGIAETMTKAYISSQYADAISYC-------------ILIVILLVKPAG 286

Query: 339 LLRLRT 344
           LL  + 
Sbjct: 287 LLGKKE 292


>gi|293606807|ref|ZP_06689158.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292814811|gb|EFF73941.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 325

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 66/319 (20%), Positives = 127/319 (39%), Gaps = 26/319 (8%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
            Q Y   +   +L++       +IV G    +SL     + +GAY+  +L  RYG+S WL
Sbjct: 27  DQGYGIRVLTLVLLFAAMGQSWNIVGGLANQISLGHAAFFGLGAYTSTLLLMRYGISPWL 86

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
            I  +  ++   G ++ LP+++ RG Y A+ATL   E+ + I   W  +T G  G+ +  
Sbjct: 87  GIVAAMAVAAVAGALLSLPTMRLRGHYFALATLAFGEVLRAIANTWASVTGGPVGLSIPY 146

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
              F     +S               I  YY++LG   +++ +   +  + +    R ++
Sbjct: 147 SEGFAQMQFKS--------------SIPYYYLMLGAALITSVVFALISHSRLGYRLRAVK 192

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK--FSENIIVISI 272
            N +A   +       ++ A  +S+A +G  G  +A       PD        ++ V  I
Sbjct: 193 ANPQAAEVIGVNTARTRILAAVISAALMGACGTLYAQFIYFFDPDTVFSLVGISVRVALI 252

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            I+GG+ +++       ++I + E+       +   + +      +    L+        
Sbjct: 253 CIIGGVGTVAGPLIGALVIIPLEEVFNDWLSGHTAGVSQLAFGLILIAIILI-------- 304

Query: 333 LMRSHSLLRLRTPSNFLER 351
                 L  L T    L R
Sbjct: 305 --EPRGLSALWTRLRNLTR 321


>gi|323525068|ref|YP_004227221.1| urea ABC transporter permease UrtB [Burkholderia sp. CCGE1001]
 gi|323382070|gb|ADX54161.1| urea ABC transporter, permease protein UrtB [Burkholderia sp.
           CCGE1001]
          Length = 547

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 79/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ + +            +++              
Sbjct: 273 ITYGLIGVINMAHGEFLMIGAYATYVVQNLFQRVAPGAFDWYPLVAVPASFAAAALVGIV 332

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 333 IER--LVLKHLYGRPLETLLTTFGISLILIQATRMLFGAQNVQVVNPSWMSGGVTVLPSL 390

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 391 ILPYNRLAILAFSLIVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 450

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  L+        L  V + 
Sbjct: 451 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTVIGGFGLGLVSKA 508

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 509 IEPFWGAVLAK-------------IAVLVLIVLFIQKRPQGMFALKGRSAE 546


>gi|115350840|ref|YP_772679.1| inner-membrane translocator [Burkholderia ambifaria AMMD]
 gi|115280828|gb|ABI86345.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia ambifaria AMMD]
          Length = 539

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/291 (11%), Positives = 77/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +              +++              
Sbjct: 265 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRHAPTAFDWYPLVAVPVSFAAAALVGIV 324

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 325 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 382

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 383 ILPYNRLAILAFALAVVFVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 442

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          +  I     V+LGG+  ++        L  V + 
Sbjct: 443 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 500

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +   +  S  
Sbjct: 501 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAPKGRSAE 538


>gi|260574983|ref|ZP_05842985.1| inner-membrane translocator [Rhodobacter sp. SW2]
 gi|259022988|gb|EEW26282.1| inner-membrane translocator [Rhodobacter sp. SW2]
          Length = 397

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 63/368 (17%), Positives = 125/368 (33%), Gaps = 35/368 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGAT-------KSQKYIDSMGIQILIYVMFAWGLSIVV 60
           L++ D +  L+ VV  L   + L          +       +  + ++Y +FA G +I+ 
Sbjct: 4   LDRKDTVFMLIVVVIALSAPILLNPWPAASQMAQFNAGYPDLMQRFVVYGIFAIGFNILF 63

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G LS        +G+Y+ V +     ++I   I +S +++G   +++G  SL+  G 
Sbjct: 64  GLTGYLSFGHAAFLGVGSYAAVWMFKLLSMNIIPAILLSMVVAGLFALVIGYVSLRRSGI 123

Query: 121 YLAIATLIM-SEIFQNILIKWKPITNGKAG--------------IYVADRLYFLGTTVRS 165
           Y +I TL      F        P+TNG+ G                              
Sbjct: 124 YFSILTLAFAQMSFNMAYSVLTPLTNGETGLQLALDDPRILDAANTTNSLPVTNLFGAEM 183

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                     +       YYV   +  ++    + + R+      R ++ NQ+       
Sbjct: 184 RSSVTWNVGGWSFDFSVGYYVCAVIMLIAFYTSVRIFRSPFGMMLRAVKSNQQRLNYTGI 243

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                 L+AF +S  + G+AG   AA       +  +++ +  V+ + ILGG  +L    
Sbjct: 244 NSRPYTLAAFVISGMYAGLAGGLLAAMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPF 303

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSF-------------NMRHTTLMVIALFLVI 332
                +     +   +N    +        +                    + +   LV+
Sbjct: 304 LGAGFIKYCENIFSKINDQILHQWFALLPDWLENTLVTVLHPFIGKGWHLTLGLIFMLVV 363

Query: 333 LMRSHSLL 340
           +     L+
Sbjct: 364 VFLPGGLV 371


>gi|331697517|ref|YP_004333756.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326952206|gb|AEA25903.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 359

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 56/303 (18%), Positives = 121/303 (39%), Gaps = 14/303 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L K  +    L  V  +L+           ++ S+    LI++  + G +++ G  G +S
Sbjct: 4   LGKLLRSTGGLGTVVLVLVASLPLWFIQSSFVLSVATLTLIFMAASLGWNVISGFGGQIS 63

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
               I + +GAY+  +L  RY L+ ++ + +  +++    +++G  +L+ RG Y ++AT 
Sbjct: 64  FGHSIFFGLGAYTTALLQVRYHLNAYVGVVLGVVVAVVLAVLLGAVTLRLRGIYFSLATF 123

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++ +F  +   ++  T G+ G             +   +            ++  Y++ 
Sbjct: 124 ALTLVFAILTGHYEGFTGGEVG-------------LTLPLLGDAPGQFSFDNKVVFYWIA 170

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  L+      + R+ +    R I+ +Q+A  +        KL   A+S+    +AG+
Sbjct: 171 TLLAALAFVATWLVLRSRLGLQLRAIQADQEAAQASGVLAFRVKLVGLAISAVPAALAGS 230

Query: 248 FFAASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
            +      I PD  F  +    +  I  +GG   L        IL+ + +L       Y 
Sbjct: 231 VYMQYVAFIDPDSAFGATVATQIAVIAFVGGAGKLWGPVIGAVILVPLQQLLNSSLSAYP 290

Query: 307 NSL 309
              
Sbjct: 291 AGF 293


>gi|304396493|ref|ZP_07378374.1| urea ABC transporter, permease protein UrtB [Pantoea sp. aB]
 gi|304356002|gb|EFM20368.1| urea ABC transporter, permease protein UrtB [Pantoea sp. aB]
          Length = 521

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 87/288 (30%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY+   + S +       +    +++     ++       
Sbjct: 248 ITYGLLGVINMAHGEMLMLGAYATWWVQSLFQQFAPDYLAWYPLLALPVAFMVTAAIGMA 307

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 I   +     + +L  W         + V      L     S +         +
Sbjct: 308 LER--TIIRHLYGRPLETLLATWGISLMLIQLVRVLFGAQNLEVANPSWLSGGLQLLPNL 365

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+L + F+ A   L L RT +    R +  N+              + AF +
Sbjct: 366 VLPWNRIAVILFVVFVLALTWLLLNRTRLGMNVRAVTQNRAMAECCGVPTGRVDMLAFGL 425

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+LGG+  L+    A   L  + ++
Sbjct: 426 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFSLGILNKV 483

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                    L+++ + L I  R   L  ++  
Sbjct: 484 LEPQIGAVLGK-------------ILILVIIVLFIQKRPQGLFAVKGR 518


>gi|332528970|ref|ZP_08404937.1| urea ABC transporter permease UrtB [Hylemonella gracilis ATCC
           19624]
 gi|332041631|gb|EGI77990.1| urea ABC transporter permease UrtB [Hylemonella gracilis ATCC
           19624]
          Length = 527

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 85/290 (29%), Gaps = 17/290 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++   +   +        + +     +        
Sbjct: 254 ITYGLMGVINMAHGELIMIGAYATYVVQGLFRSYLPGAFDWYLVAAVPVAFLASALVGAA 313

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         +        +     + +       S +
Sbjct: 314 LER--GVIRFLYGRPLETLLATWGISLVLMQAVRSLFGAQNVAVENPAWMSGGWQVLSNL 371

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                   ++     +   + L + RT +    R +  N+     +          AFA+
Sbjct: 372 TLPYNRLVIIAFAFAVLLGMALLISRTRLGLFVRGVTQNRPIASCMGVNTARVDTYAFAL 431

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG   A S+             +    +V+LGG+  L+    A   L  V +L
Sbjct: 432 GSGVAGLAGC--ALSQVGNVGPDLGQGYIVDSFMVVVLGGVGQLAGTVYAALGLGLVNKL 489

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
             G                      +++I +   I  R   +  L+  S 
Sbjct: 490 LEGWQGAVLAK-------------IMVLIFIIAFIQKRPQGIFALKGRSV 526


>gi|228939093|ref|ZP_04101689.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228971970|ref|ZP_04132589.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228787741|gb|EEM35701.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228820572|gb|EEM66601.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar berliner ATCC 10792]
          Length = 317

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 59/331 (17%), Positives = 128/331 (38%), Gaps = 31/331 (9%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY   +
Sbjct: 2   LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61

Query: 84  LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           L  R      +  + I  + +IS     I+GL SL+ +  + A+ TL +S++F  +  KW
Sbjct: 62  LFDRQGVSITNFLIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T+G  G        F                         YYV L    +   ++  
Sbjct: 122 RGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVLLRL 162

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++  +
Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVNTTV 222

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F     +  + + ++GG+ +L      + I+  +      +   Y             R 
Sbjct: 223 FSIEMTLNALLMTMIGGVGTLIGAIAGSGIIESLKYYLSELATEY---------PIFERW 273

Query: 321 TTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           T ++ +   +V+L+    L+         +R
Sbjct: 274 TIILGLLYIIVLLVFPKGLVGTVKKLKSFKR 304


>gi|134292762|ref|YP_001116498.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|134135919|gb|ABO57033.1| amino acid/amide ABC transporter membrane protein 1, HAAT family /
           amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Burkholderia vietnamiensis G4]
          Length = 603

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 71/312 (22%), Positives = 125/312 (40%), Gaps = 33/312 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +  Y+        +Y + A  L++V G++G +SL       IGAY+  +L S  G 
Sbjct: 324 PWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGAYASALLSSGLGW 383

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S  + IP +  I+   G ++  P+ + RG Y++IATL + E+   +++ W  +T G  GI
Sbjct: 384 SPAVTIPCAGAITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVILNWDGLTRGPLGI 443

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                L +                         Y+  L +  + A + + L R+ +    
Sbjct: 444 TGIAPLPW------------------ASTARAAYWFALAVLVVLALLQVRLLRSHLGRTL 485

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +R++  A  +        K  AFAV     G++G   A     I+   F    +I+ +
Sbjct: 486 RAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINHQTFDSQVSILAL 545

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           ++VILGG+ ++         LIG+ EL      Y                  +  + L L
Sbjct: 546 TMVILGGLGNVLGGIVGAVALIGLPELFRWAADY---------------RMLIYGVVLVL 590

Query: 331 VILMRSHSLLRL 342
           ++  R   LL  
Sbjct: 591 LVRFRPQGLLGT 602



 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 52/309 (16%), Positives = 106/309 (34%), Gaps = 25/309 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  I   IY + A GL+++ G   L++      Y +GA+   +  +R+GL + + +
Sbjct: 6   DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFVGWLCLTRFGLPLPVAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                   A G+ +    L+       IA L+ +     IL +   +  G     V   L
Sbjct: 66  AAVVAGCAALGIAIERIGLRPLRHAARIAPLLATIGISFILDQLVQLVFGADPRAVPTPL 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             +          +       +A +  +LR T +  A R    +
Sbjct: 126 PDWHVR-----------IAGATLGALDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +     + FA++ A  G++G       D I P M  F   +  +  +++G
Sbjct: 175 RDAALQMGVDVDRVNQAVFAIACALGGVSGLLVGMYYDSIDPAM-GFQATLKGVVALLIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++      + +L  V      +    +  L  F               L + ++ R 
Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280

Query: 337 HSLLRLRTP 345
           + L   +  
Sbjct: 281 NGLFSAKRA 289


>gi|307727114|ref|YP_003910327.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|307587639|gb|ADN61036.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
          Length = 648

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 59/305 (19%), Positives = 134/305 (43%), Gaps = 33/305 (10%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+  + ++ILI V+FA  L  ++G  G+ S      + +GAY   +      L +   +
Sbjct: 344 PYMPVLLVEILIAVLFATSLHFIMGPGGMHSFGHAAYFGLGAYGAALFLKVLNLPMEAAL 403

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ +++    ++ G   ++  G YLA+ TL  ++I  +++ +W  +T G  GI      
Sbjct: 404 LLAPLLAVGGALVFGWFCVRLSGVYLAMLTLAFAQIVWSVVFQWDDVTGGSNGI------ 457

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                          +P+ ++   +  YYV L    +   ++  +  + +  A R  RD+
Sbjct: 458 ------------LGLWPADWLSSPVAFYYVTLFCAVIGVWLLRRMLFSPLGYAMRASRDS 505

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                ++   +   + ++F ++S F G+AG+ +A S+  ISP++   S ++  + +V+LG
Sbjct: 506 VLRAEAIGIDVKRVQWASFVIASLFCGLAGSLYAFSKGTISPEVISVSRSVDGLVMVLLG 565

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +L+      A+   + +       Y+                 L+  A+ L+++   
Sbjct: 566 GLQTLAGPIVGAAVFTWLQDTVARQTDYW---------------QALLGFAILLLVIAFP 610

Query: 337 HSLLR 341
             ++ 
Sbjct: 611 QGIVG 615



 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 94/307 (30%), Gaps = 18/307 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95
           + +         + A GLS++ G   +++      Y  G   AYS      +     WL 
Sbjct: 9   LVNGLADASTLFLVAAGLSLIFGVTRIVNFAHGSFYMFGIYIAYSMASRFGQTAGGFWLS 68

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  +A++    G ++ +  L+       +  L+ +     I         G   ++    
Sbjct: 69  VLAAALVVAVLGALVEVVVLRRIYQAPELFHLLATFALVLIFRDAALWLWGPQDLFGPRA 128

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                     +   +++    +   +   L RT      R    
Sbjct: 129 P----------HLAGAVNFLGHPLPTYDIALIVIGPVVLLLLWYALTRTRWGTLVRAATQ 178

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++   +L     +     F V +   G+ GA                        +V++
Sbjct: 179 DREMLGALGINQAWLFTGVFFVGAFLAGLGGALQGPRMSA--NLSLDLETIGNAFVVVVV 236

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S+     A  I+  +  LC G+      ++     S +        + + +V+++R
Sbjct: 237 GGMGSIPGAFVAALIIAEIKALCIGLGH---VTIFGVGLSLSRFTLVAEFVVMAVVLVVR 293

Query: 336 SHSLLRL 342
              LL  
Sbjct: 294 PWGLLGR 300


>gi|153011320|ref|YP_001372534.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
 gi|151563208|gb|ABS16705.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
          Length = 337

 Score = 93.4 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 55/310 (17%), Positives = 119/310 (38%), Gaps = 14/310 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V     +   L +  +  ++  +  +I+I+ + A  L+ ++G   L+S        IGA
Sbjct: 32  LVFAAFAIVPLLASVLNDSFLLVIVTRIMIFALAALSLNFIMGYGALVSFGHAAYIGIGA 91

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL S     + L +  + +++    ++ G  SL+  G Y  + TL   ++    ++
Sbjct: 92  YAVGILSSYGIDDLILQLVAAIVVAAFFALVTGYISLRTSGVYFIMITLAFGQMAFFFMV 151

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                  G  G+ ++ R    G  +             +   + ++Y +L +   +  I 
Sbjct: 152 SLSAF-GGDDGMTLSTRSTLFGNML-------------LSSNLVLFYFVLAVLMGAFFIF 197

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L  +      R  RDN     ++  +    +L+A+ ++     +AG   A     +SP
Sbjct: 198 RMLVHSRFGRVLRGTRDNPVRMRAIGFSPFSFQLTAYVIAGVAAAIAGVLLANQIQFVSP 257

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
               +  +  +I +V+LGGM +L          I + E+    + ++   L  F     +
Sbjct: 258 AFMSWQRSGELIVMVVLGGMGTLIGPVLGATAFIVLEEVLAHFSEHWKLGLGLFLVLVVL 317

Query: 319 RHTTLMVIAL 328
                +   L
Sbjct: 318 FSRDGIGGLL 327


>gi|303229519|ref|ZP_07316307.1| branched-chain amino acid ABC transporter, permease protein
           [Veillonella atypica ACS-134-V-Col7a]
 gi|302515644|gb|EFL57598.1| branched-chain amino acid ABC transporter, permease protein
           [Veillonella atypica ACS-134-V-Col7a]
          Length = 336

 Score = 93.0 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 58/309 (18%), Positives = 122/309 (39%), Gaps = 19/309 (6%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y   + +  +I  +    +   +   G LSL      ++GAY   +L  +  L I 
Sbjct: 3   IFNPYYLQIVMFFIINAILGISIYFTLA-SGQLSLGAAGFMSVGAYVGALLSLKADLPIV 61

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + I V   ++    +I+GLP+ + +G YLAIATL   E+ + I +    +TNG  G+   
Sbjct: 62  VGILVGGFVAALVAVIIGLPTTRLKGLYLAIATLGFGEVVRVIFLNL-DVTNGALGLSGI 120

Query: 154 DRLYFLGTTVRSLIRFFRFPS--SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
             +    T     I         +     I    +LL +     +  + +  + +  A+ 
Sbjct: 121 PSIPQELTNFAYEIDIDGLMGIDAVAWGNIMAIIILLIVLIFIIAFCVRINNSRVGRAFA 180

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            I+ +  A   +   +++ K+ AF + +   G+ G  +A   + I+P  F + + + ++ 
Sbjct: 181 AIKADDHAAELMGINVVYYKMMAFIIGAFIAGIGGGLYAHITNFINPTDFSYHKVVQILL 240

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             + GG   +      + IL  + E+   ++ Y                  +    L ++
Sbjct: 241 FPVFGGSNVVWGSVLGSFILTLLPEVLRFLSDY---------------RDIIYGALLVIL 285

Query: 332 ILMRSHSLL 340
           + +R   +L
Sbjct: 286 MAVRPDGIL 294


>gi|182413833|ref|YP_001818899.1| inner-membrane translocator [Opitutus terrae PB90-1]
 gi|177841047|gb|ACB75299.1| inner-membrane translocator [Opitutus terrae PB90-1]
          Length = 318

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 56/308 (18%), Positives = 109/308 (35%), Gaps = 26/308 (8%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y   + I + I ++ A  L++V G  G  SL      ++GAY    +    G  +   
Sbjct: 26  DPYHLDVLIGVGINIILAVSLNLVNGYTGQFSLGHAGFMSVGAYLAAAVTLFLGPRLLGE 85

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
                   G       L         LA A   +     ++ ++   +     G     R
Sbjct: 86  D------GGTLWQQSLLFLGALIVGGLAAAFTGLLVGVPSLRLRGDYLALVTLGFGEIIR 139

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                   +++           I      + +L    ++  ++  L  +     +    D
Sbjct: 140 -----VVFQNVEVLGGALGLNGIPPYTTIFWVLAFVAITLFVVACLVTSTYGRGFLATHD 194

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  ++       K+ AF V + F G+AG  +   +  I+P  F F+++I ++ +VIL
Sbjct: 195 DEVAAEAVGLNTTRYKIVAFVVGAFFAGIAGGLYGHFKMTITPTGFDFTKSIEIVVMVIL 254

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM +   +  A A+L  + E+   +  Y                  +    L +++L R
Sbjct: 255 GGMGNTLGVVLAAALLTLLPEVLRPVAEY---------------RMVIYSFLLIVLMLAR 299

Query: 336 SHSLLRLR 343
              L  LR
Sbjct: 300 PQGLFNLR 307


>gi|114761046|ref|ZP_01440961.1| branched amino acid ABC transporter (permease) [Pelagibaca
           bermudensis HTCC2601]
 gi|114545294|gb|EAU48296.1| branched amino acid ABC transporter (permease) [Roseovarius sp.
           HTCC2601]
          Length = 327

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 67/328 (20%), Positives = 117/328 (35%), Gaps = 31/328 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            + + +   L L    +  Y   +   +L+ V+   G ++ +G+LG L+      + IGA
Sbjct: 16  LLFWAVPAVLLLLPLTTNPYTQFIANGMLVSVLVTLGFTLTIGNLGQLAFANTAFFGIGA 75

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGAC-GMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           YS  IL ++ G+   L IP++         +         R  YLAI TL   E+ +   
Sbjct: 76  YSSAILAAKLGVPWLLTIPLAGAFGALGGFLASAAALRGIRTYYLAIITLAFGELMRWAY 135

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +  KP+T G  G+ +                        +  +   +Y+ L +  L    
Sbjct: 136 LHAKPLTGGTDGMPMP---------------RETLLGISLTDDTLKFYIFLAVTVLLVKA 180

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L L R+    A   +R+N+ A  SL        L  F  S   +G AGA FA     + 
Sbjct: 181 TLNLMRSHFGRAVMAVRENEIATASLAIPTARVILVTFMWSGFVVGCAGALFARHVGHVF 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F     I   ++V++GG+ S+        +L  + E                     
Sbjct: 241 PESFGMLHLIASFAMVLVGGLGSVLGAVLGAVLLTALPEYLRAF---------------P 285

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTP 345
                   + +  V++     L  L   
Sbjct: 286 GMEELFFGLIVAGVLVAMPMGLASLLRR 313


>gi|49475592|ref|YP_033633.1| high-affinity branched-chain amino acid transporter, permease
           protein [Bartonella henselae str. Houston-1]
 gi|49238399|emb|CAF27626.1| High-affinity branched-chain amino acid transporter, permease
           protein [Bartonella henselae str. Houston-1]
          Length = 352

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 62/339 (18%), Positives = 115/339 (33%), Gaps = 7/339 (2%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K          +   + FLF       +Y   +   I I  + A  L+++ G  G+ S
Sbjct: 1   MAKSASTFLSCISILFFIGFLFYADNHFNEYTLRVINLIAINAILAISLNLIYGFTGMFS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      AIGAY   IL          ++ +   I+     +     +      L  A +
Sbjct: 61  LGHAGFMAIGAYVCAILLLSPEQK--EMMWILEPIAEPLHDLQLPFFVTVVVSGLCAAVV 118

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +      + +    +     G     R+     T  +                + Y  L
Sbjct: 119 GLLIALPILRLGGDYLGIATLGFAEIIRIVITNATSVTNGSLGIKGIPQNATLWWNYSWL 178

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +        ++    R+   N  R IRD++ A  ++     F +  +F   + F G+ GA
Sbjct: 179 VFTVTFIILLL----RSNTGNVLRAIRDDEIAAKTMGINAFFYRSFSFTAGAFFAGVGGA 234

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             AA    I P MF F     ++ IV+ GG+ S++     + I+  ++E    +   +  
Sbjct: 235 LMAALISTIDPKMFNFLLTFNILMIVVAGGLGSITGSIIGSIIITVMLEWLRIIESPFDL 294

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
             +            +  + L ++IL     LL  R  S
Sbjct: 295 GFIHIP-ETPGLRMVIFSLLLLVIILFWRRGLLGQREFS 332


>gi|329903086|ref|ZP_08273360.1| Putative ABC transport system, membrane protein [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327548495|gb|EGF33164.1| Putative ABC transport system, membrane protein [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 313

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 63/324 (19%), Positives = 117/324 (36%), Gaps = 29/324 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +   + L   L       Y  ++  Q+LI  +FA  L+++VG  GL SL       + 
Sbjct: 4   VLLFVFVALLAILPWLAGSDYYTNLASQVLIAALFALSLNLLVGYAGLTSLGHAGFLGLA 63

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYS   L              +   S     + GL +L+  G    + TL + +I   I 
Sbjct: 64  AYSSAWLMLNLQWDHASAAAAALAGSTVVAALFGLIALRASGISFLMITLALGQILWGIA 123

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +W  +T G  G+    R +  G  +     F              YY  L +  L  ++
Sbjct: 124 YRWAGVTGGDNGLSGITRPHPFGLDLGPASHF--------------YYFTLLVFLLVWAL 169

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           I    R+    + R  RD  +   +L   +   +   F VS  F  +AG  +   +  IS
Sbjct: 170 IALWVRSPFGASIRGTRDQPRRMSALGFNVWLIRWITFTVSGFFGAVAGLMYVYYQQFIS 229

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P     + +  ++ +VI GG  +L+      A+++ +  +  G    +            
Sbjct: 230 PHSLALANSAEMLLMVIAGGPATLAGPVVGAALVVLLKNIASGYIDRW------------ 277

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                L+      ++L   + ++ 
Sbjct: 278 ---IMLLGFVFLFIVLFVPNGIVP 298


>gi|221197324|ref|ZP_03570371.1| inner-membrane translocator [Burkholderia multivorans CGD2M]
 gi|221203997|ref|ZP_03577015.1| inner-membrane translocator [Burkholderia multivorans CGD2]
 gi|221176163|gb|EEE08592.1| inner-membrane translocator [Burkholderia multivorans CGD2]
 gi|221183878|gb|EEE16278.1| inner-membrane translocator [Burkholderia multivorans CGD2M]
          Length = 603

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 74/324 (22%), Positives = 130/324 (40%), Gaps = 33/324 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+V  + L   L    +  Y+        +Y + A  L++V G++G +SL       IGA
Sbjct: 312 AIVALVALAAVLPWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGA 371

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L S  G S  + IP +  I+   G ++  P+ + RG Y++IATL + E+   +++
Sbjct: 372 YASALLSSDLGWSPAVTIPCAGAITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVIL 431

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  +T G  GI     L +                         Y+  L +    A + 
Sbjct: 432 NWDGLTRGPLGITGIAPLPW------------------ASTAQAAYWFTLTVLVAFALVQ 473

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L R+ +    R +R++  A  +        K  AFAV     G++G   A     I+ 
Sbjct: 474 VRLLRSHLGRTLRAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINH 533

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F    +I+ +++VILGG+ ++         LIG+ E+      Y              
Sbjct: 534 QTFDSQVSILALTMVILGGLGNVLGGIVGALALIGLPEMFRWAADY-------------- 579

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
               +  + L L++  R   LL  
Sbjct: 580 -RMLIYGLVLLLLVRFRPQGLLGT 602



 Score = 89.5 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 106/305 (34%), Gaps = 25/305 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  I   IY + A GL+++ G   L++      Y +GA+   +  +R+GL + + +
Sbjct: 6   DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +  GA G+ +    L+       IA L+ +     IL +   +  G     V   L
Sbjct: 66  AAVVVGCGALGVAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                        +       +A +  +LR T +  A R    +
Sbjct: 126 PDWH-----------LRLGGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +     + FA++ A  G++G       + I P M  F   +  +  +++G
Sbjct: 175 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++      + +L  V      +    +  L  F               L + ++ R 
Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280

Query: 337 HSLLR 341
           + L  
Sbjct: 281 NGLFS 285


>gi|26991523|ref|NP_746948.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Pseudomonas putida KT2440]
 gi|24986606|gb|AAN70412.1|AE016683_3 branched-chain amino acid ABC transporter, permease protein,
           putative [Pseudomonas putida KT2440]
          Length = 359

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 55/330 (16%), Positives = 99/330 (30%), Gaps = 27/330 (8%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L     A     Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +  
Sbjct: 37  LLPADHALHVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYL 96

Query: 86  S----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                            W  +P     +      + L  L      L           + 
Sbjct: 97  MRQAAGDGLPGFMTFLSWTELPWYWAGTQHFAWALCLVVLAPGLLALVFGWFAFRSRIKG 156

Query: 136 ILIKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           +           AG+ +  R    +       S      F  +       ++ + + +  
Sbjct: 157 VYFSIMTQALTFAGMLLFFRNETGFGGNNGFTSFRTILGFDIAAQGTRAVLFLLTVALLL 216

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            S  +   L R+        +RD +             KL  + +S+   G+AGA +   
Sbjct: 217 ASLYLCWRLTRSKFGRLLTAVRDAENRMMFCGYDPRGFKLLVWVLSAVLCGLAGALYVPQ 276

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              I+P     + +I     V LGG  +L        ++ G+                 F
Sbjct: 277 VGIINPSEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------F 322

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             +F       +     LV L     ++ L
Sbjct: 323 TVAFPEFWLFFLGALFILVTLYLPKGVVGL 352


>gi|221064926|ref|ZP_03541031.1| inner-membrane translocator [Comamonas testosteroni KF-1]
 gi|220709949|gb|EED65317.1| inner-membrane translocator [Comamonas testosteroni KF-1]
          Length = 354

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 71/327 (21%), Positives = 135/327 (41%), Gaps = 17/327 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + ++     FL +    S     ++ I  +I  + A GL+I+VG  G +SL      A+G
Sbjct: 28  VILLILAFAFLAIPFIASDYTFQAILIPFVIMSLAALGLNILVGYCGQISLGTAAFMAVG 87

Query: 78  AYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           AY+   +     G+ + + +    +++   G++ GLPSL+ RG YLA+ATL        +
Sbjct: 88  AYAAYNLQARIEGMPLLVALIGGGLVAMVFGVVFGLPSLRIRGLYLAVATLAAQFFVDWL 147

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
             +   +TN  +   V+ +   +                        Y + L +  L   
Sbjct: 148 ATRAAWVTNNSSSGSVSAKPLAILGWAIDTPMEK-------------YLLCLAILCLLGL 194

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDR 255
               L R+++   W  +RD   A   +     +AKLSAFAVSS  +G+AGA +       
Sbjct: 195 AAKNLVRSSVGREWMAMRDMDVAAAVIGIRPTYAKLSAFAVSSFIVGVAGALWGFVHLGA 254

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
             P  F    ++ ++ ++I+GG+ S+       A  + +  L   +   ++  L     +
Sbjct: 255 WEPAAFSLDRSLQLLFMIIIGGLGSVVGSIFGAAFFVLLPLLLNQV--PHWLGLPLSTAT 312

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                  +    +   +++  H L +L
Sbjct: 313 ATYLEHMIFGALIVFFLIVEPHGLAKL 339


>gi|239983434|ref|ZP_04705958.1| putative D-ribose ABC transporter substrate-binding/permease
           protein [Streptomyces albus J1074]
 gi|291455257|ref|ZP_06594647.1| D-ribose ABC transporter permease [Streptomyces albus J1074]
 gi|291358206|gb|EFE85108.1| D-ribose ABC transporter permease [Streptomyces albus J1074]
          Length = 653

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 105/311 (33%), Gaps = 29/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             VV  + + +  G   +   + ++G+Q  +  + A+G++ V+ S G + L+     A+ 
Sbjct: 32  ALVVLVVAMSVLSGDFLTTDNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVAALS 90

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A     L +  G+ + + + ++A    ACG++ G      +         ++        
Sbjct: 91  ATVLAWLATSEGVPVVIAVLLAAATGLACGLVNGALISYGKLPPFIATLAML-------- 142

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                         +   L  + +    +               ++   +L M  +    
Sbjct: 143 -------------SIGRGLSLVISQGSPIAFPDSVSKLGDTLGGWLPVPVLVMIVMGLIT 189

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L LRRT I  +   I  N++A       +   KL  +A+S  F  +AG   A+      
Sbjct: 190 ALLLRRTYIGRSMYAIGGNEEAARLSGIRVKRQKLVIYALSGLFAAVAGVVLASRLSSAQ 249

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           P   +    +  I+ V++      GG+   S       IL  +      ++   F   + 
Sbjct: 250 PQAAQ-GYELDAIAAVVIGGASLAGGVGKASGTLIGALILAVLRNGLNLLSVSAFWQQVV 308

Query: 312 FDCSFNMRHTT 322
                 +    
Sbjct: 309 IGVVIALAVLL 319


>gi|134102110|ref|YP_001107771.1| putative D-ribose ABC transporter permease protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291007638|ref|ZP_06565611.1| putative D-ribose ABC transporter permease protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133914733|emb|CAM04846.1| putative D-ribose ABC transporter permease protein
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 644

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 52/297 (17%), Positives = 96/297 (32%), Gaps = 26/297 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +   + ++G+Q  +  + A+G++ V+   G + L+      +         +  GL
Sbjct: 38  PDFLTANNLLNVGVQASVVAVLAFGMTFVI-VSGGIDLSVGSVAGLSGIVTGWAVAGAGL 96

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +WL IPV      A G++ G+     R      ATL M  + + + +            
Sbjct: 97  PLWLAIPVGLAAGAAAGLLSGVLITAGRVPPFI-ATLAMLSVARGLALVLADGR------ 149

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                           +  +           F+ Y +L M  +       LRRT    A 
Sbjct: 150 -------------PISLDGWLAELGSGELFGFLPYPVLVMLAIGLLTAFVLRRTYAGRAM 196

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N +A       +   KL  +A+S  F  +AG   AA      P+     E   + 
Sbjct: 197 YAIGGNAEAARLSGIKVSRQKLLIYALSGLFAAVAGILLAARLASAQPEAGSGYELDAIA 256

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           ++VI      GG+ S         +L  +      ++   F   +       +    
Sbjct: 257 AVVIGGASLAGGVGSALGTFVGALVLAVLRNGLNLLDVSAFWQQVAIGAVIAVAVLF 313


>gi|94501625|ref|ZP_01308141.1| ABC-type branched-chain amino acid transport system, permease
           component [Oceanobacter sp. RED65]
 gi|94426201|gb|EAT11193.1| ABC-type branched-chain amino acid transport system, permease
           component [Oceanobacter sp. RED65]
          Length = 401

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 53/340 (15%), Positives = 105/340 (30%), Gaps = 21/340 (6%)

Query: 9   NKYDKILCLLAVVYPL--LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
            +    +  L V++P   L+F    A     Y  ++  + L Y + A  + ++ G  G+L
Sbjct: 29  QRLLLAILALIVIFPFCNLVFEPGSALHVSTYTLTLTGKYLCYALLALAVDLIWGYCGIL 88

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           SL     +A+G Y+  +   R      +                 LP   F  D    A 
Sbjct: 89  SLGHGAFFALGGYAMGMYLMRQIGDRGVYGNPELPDFMVFLNWNELPWYWFGFDQFWFAM 148

Query: 127 LIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLI 167
           +++  +   +   +  +                          +  D  +     +    
Sbjct: 149 IMVLLVPGTLAFVFGWLAFRSRVTGVYLSIITQALTYALMLAFFRNDMGFGGNNGLTDFK 208

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
               F          ++            I  ++ ++ +     +IRD +     L   +
Sbjct: 209 DILGFDLQSDGTRSALFIASGLALIFGYLISKFITKSKLGRVLVSIRDAEMRTRFLGYKV 268

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
            + KL  F VS+   G+AGA +      I+P  F    +I +I  V +GG  +L   A  
Sbjct: 269 EYYKLFVFVVSAMLAGIAGALYVPQVGIINPGEFSPINSIEIIIWVAVGGRGTLFGAALG 328

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              +        G     +  LL         +    ++ 
Sbjct: 329 AIAVNYAKTYFTGAFAELWLFLLGGLFVMTTLYLPKGIVG 368


>gi|83719719|ref|YP_441341.1| branched-chain amino acid ABC transporter permease [Burkholderia
           thailandensis E264]
 gi|167582957|ref|ZP_02375831.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis TXDOH]
 gi|167618191|ref|ZP_02386822.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis Bt4]
 gi|257139985|ref|ZP_05588247.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis E264]
 gi|83653544|gb|ABC37607.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis E264]
          Length = 316

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 100/310 (32%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           I +  +   +Y + A G ++V G LG+++        +GA   +   +            
Sbjct: 8   ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAITVLQNHFPELGHV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +  +I+      +G    +     L  A  +   I    +                
Sbjct: 68  ATLTIGLVIAAVVCACVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMMIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    +++    + A ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIQAGANNPGAVISMTEITIIIVAFLVMAGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 AENPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|94312907|ref|YP_586116.1| ABC transporter permease [Cupriavidus metallidurans CH34]
 gi|93356759|gb|ABF10847.1| ABC-type uncharacterized transport system, permease component
           [Cupriavidus metallidurans CH34]
          Length = 342

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 53/324 (16%), Positives = 120/324 (37%), Gaps = 28/324 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +      +  +         Y  ++     I  +   GL+++ G  G L+L      AIG
Sbjct: 8   IGWTLLFVAAIVFPLAVPNSYYLTVMTLAFIMAIATLGLNLLTGYTGQLNLAHGGFMAIG 67

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL   + +  WL   +S ++    G ++G  SL+ +G Y +I T+ +  I   ++
Sbjct: 68  AYTLGILTVDHQMPYWLAFALSGVVCMVLGYVVGTVSLRLKGHYFSIFTMCVGYIIYLLI 127

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G+        +G      ++               YY++L    L   +
Sbjct: 128 EKWESLTHGAVGLIGIPVPASIGPIAFDSVQAQ-------------YYLVLVFLALGTFV 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  +  + +  ++  +R++     +L   ++  K+ +F +S  + G AGA +A     + 
Sbjct: 175 MHRIVSSLVGRSFMAVRNSDALAEALGINLMRTKVLSFVLSVGYAGFAGALYAGQVRFLG 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           PD+ +      ++  +                +      L   +       + +      
Sbjct: 235 PDIARTDITFDMVMAM---------------LVGGTGTLLGPLLGSLLVPWVTQTLQFLQ 279

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                +    L L+I+     ++ 
Sbjct: 280 DYRMLVFGPVLILLIIFVPDGIVG 303


>gi|254514850|ref|ZP_05126911.1| inner-membrane translocator [gamma proteobacterium NOR5-3]
 gi|219677093|gb|EED33458.1| inner-membrane translocator [gamma proteobacterium NOR5-3]
          Length = 529

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 85/290 (29%), Gaps = 21/290 (7%)

Query: 53  AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112
           A GL+I  G +G++++       +GAY+  +L         + + ++   +      +GL
Sbjct: 254 AVGLAITFGVMGVINMAHGELIMLGAYTTWVLQQMLPGQPGIALLLAIPAAFLVSAAVGL 313

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
              +    +L    L      + +L  +      +  +                +     
Sbjct: 314 VIERGVIRFLYGRPL------ETLLATFGISLILQQAVRSIFSPLNRSVLTPEWLSGAWE 367

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
            +  +        +L+    + A ++  +R T +    R +  N+    +L         
Sbjct: 368 VTQGLSLTYNRMAILVFSLMVFAGLLALMRYTRLGLQVRAVAQNRAMARALGVRSARVDA 427

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             FA+ S   G+AG   +   +         +  I    +V+ GG+ +L     A   L 
Sbjct: 428 LTFALGSGVAGVAGVALSQLTNV--GPNLGQAYIIDSFLVVVFGGVGNLWGTLVAAFSLG 485

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              ++           +L                        R   L   
Sbjct: 486 VANKVLEPATGAVLAKILLLVALILFLQR-------------RPQGLFPR 522


>gi|229816640|ref|ZP_04446929.1| hypothetical protein COLINT_03689 [Collinsella intestinalis DSM
           13280]
 gi|229807768|gb|EEP43581.1| hypothetical protein COLINT_03689 [Collinsella intestinalis DSM
           13280]
          Length = 360

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 75/340 (22%), Positives = 141/340 (41%), Gaps = 27/340 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  + D     + V+   L+ +        + I    + I  Y++ A  L++VVG  G L
Sbjct: 8   KKTRRDLATYAMVVLAFALITVMKSNGMIPRMIVGQLVPICSYIVMAISLNLVVGVAGDL 67

Query: 67  SLNCVIAYAIGAYSYVILGSRY-------GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           SL      ++GAYS ++             + + + + V A  +   G ++G+P L+  G
Sbjct: 68  SLGHAGFMSVGAYSGIVAAMSLSEAIPSDTVRLVIALVVGAASAALAGFLIGIPVLRLSG 127

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR-----LYFLGTTVRSLIRFFRFPS 174
           DYLAI TL   EI + ++       +      + +      +  LG T            
Sbjct: 128 DYLAIVTLAFGEIIKEVVTCLIVGVDEHGLHVLFNLTGKLTVDDLGLTETGTAIIKGAQG 187

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
           +     I  ++    +  ++  ++L L R+    A   +RDN+ A  S+  +    ++ A
Sbjct: 188 ASGTEMISTFFAGFVLIMVALVVVLNLVRSRTGRAILAVRDNRIAAESVGISTTKYRMIA 247

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F VS+A  G AGA F  S  ++S   F F+ +I+++  V+LGG+ ++     A  +L  +
Sbjct: 248 FVVSAALAGAAGALFGNSFSQLSATKFDFNMSILILVFVVLGGLGNMRGSILAATVLTIL 307

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
            E     + Y                  +  I L LV+++
Sbjct: 308 PEALRQFSDY---------------RMLVYAIVLILVMIV 332


>gi|39997105|ref|NP_953056.1| branched-chain amino acid ABC transporter permease [Geobacter
           sulfurreducens PCA]
 gi|39983995|gb|AAR35383.1| branched-chain amino acid ABC transporter, permease protein
           [Geobacter sulfurreducens PCA]
 gi|298506118|gb|ADI84841.1| branched-chain amino acid ABC transporter, membrane protein
           [Geobacter sulfurreducens KN400]
          Length = 357

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 64/345 (18%), Positives = 133/345 (38%), Gaps = 21/345 (6%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +    + ++  V  L             Y   + I   +  +     +IV G  G  S+
Sbjct: 11  TRGASPVSIILGVVILAGLFLFPKAVESPYALHIMILFFLSTIMGESWNIVGGYTGQYSV 70

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                +  GAY+ ++L     +  W  +     ++    +I+G    + RG Y  +A++ 
Sbjct: 71  GHAAYFGAGAYTTMVLMQFKQIPPWYGMIAGIAVALVVSLIIGSICFRLRGPYFVLASIA 130

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           ++EI +   +  K +TNG  GI   D   F                +  + ++  YY+ L
Sbjct: 131 VAEIMRLCAMNLKDLTNGAEGILATDIPPF---------TLGGTVITDFLSKVPFYYIGL 181

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  L+ ++   ++ + +   ++ IR++Q A  SL   +   K  A A+S+ F  +AG+F
Sbjct: 182 VIAILTIAVTYLVQHSKLGYYFQAIREDQDAAHSLGINLSIYKNIALAISAVFTSLAGSF 241

Query: 249 FAASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC-------- 299
           +A     I P        ++ ++ I I+GG+ ++      + +L+ + E           
Sbjct: 242 YAIYIGFIDPPTVLALDISVQIVLICIIGGIGTIWGPVVGSLVLVPLSEALRSNLIAQGI 301

Query: 300 ---GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              G+        +         H  +  I + +VIL     +L 
Sbjct: 302 FKIGLASEESGVGIFLKDHLAHAHALIYGILVVVVILFMPDGVLG 346


>gi|330818058|ref|YP_004361763.1| ABC branched-chain amino acid family transporter, inner membrane
           subunit [Burkholderia gladioli BSR3]
 gi|327370451|gb|AEA61807.1| ABC branched-chain amino acid family transporter, inner membrane
           subunit [Burkholderia gladioli BSR3]
          Length = 316

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 100/310 (32%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +  +   +Y + A G ++V G LG+++        IGA   +   +            
Sbjct: 8   VINGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPELGNV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +  +I+ A    +G    +     L  A  +   I    +                
Sbjct: 68  ATLTIGLVIAAAVCAAVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMMIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L +T    +      +   +       ++     + A ++L + +T +  A R I
Sbjct: 128 LPFPQLLSTNPLNVIHPTDTTPGAVISPTEIVIIAVAFIVMAGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 SENPNNASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        + L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFVVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|311742145|ref|ZP_07715955.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Aeromicrobium marinum DSM
           15272]
 gi|311314638|gb|EFQ84545.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Aeromicrobium marinum DSM
           15272]
          Length = 376

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 66/331 (19%), Positives = 134/331 (40%), Gaps = 14/331 (4%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             +++  F         +  +    LI  + A GL++V G  G +SL       +GAY+ 
Sbjct: 33  LAIVIASFGLPFLLTNDLLLVLTLGLIASVGAIGLNLVTGYAGQVSLGHAFFIGLGAYTG 92

Query: 82  VI-------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +           YGL +++ +P + +++   G+++G  +++ RG YLAI TL +  +  
Sbjct: 93  AVLGGDPDAAVRGYGLPLYVWLPAAGVVAAIAGLLVGPIAVRLRGLYLAIVTLGLVFLGD 152

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           +I  + +  T G        +L   G    +   +     S    + FM  V L +    
Sbjct: 153 HIFREAREFTGGPGVGRRGPKLEAFGIDFTTTGTYLGVELSREQLQFFMALVFLII---F 209

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A +   + R+ I  A+  +RD   A   +   +   K+ AFA+SS + G+ GA + A   
Sbjct: 210 AVLARNIARSGIGRAFSAVRDRDVAAAVVGVDLTKYKIMAFAMSSFYAGVTGALYYAVVG 269

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV----VELCCGMNFYYFNSLL 310
              P+ F    +I  ++++++GG+ +++        +  +     E+   M F    S  
Sbjct: 270 VFEPNTFGLLLSIQYLAMILIGGVATITGSIMGALFVTSLGRISGEIASFMPFISTTSGS 329

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
               +       L  + +   ++     L  
Sbjct: 330 SGLLTVFQLEAILYGLLIVGFLIFEPRGLFG 360


>gi|319765017|ref|YP_004128954.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|330827212|ref|YP_004390515.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317119578|gb|ADV02067.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|329312584|gb|AEB86999.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 331

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 58/298 (19%), Positives = 128/298 (42%), Gaps = 18/298 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           ++++  +L  LA+V  + LF+  G         S+  ++LIY + A G ++++G  GLLS
Sbjct: 1   MSRHSHLLLALAIVVAMPLFMHSG---------SLASEVLIYALAAMGCNLLLGYTGLLS 51

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
               I + +G+Y+  +L +R+ L + L +  +  +  A   ++G  +++ RG Y  + TL
Sbjct: 52  FGQGIFFGLGSYTIALLLTRWPLPMPLALLAAITMGAAGAAVVGWIAIRQRGTYFVMLTL 111

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +++F  I      +T G  G+    R           +         +      Y  +
Sbjct: 112 AFAQMFYFIAYSLPGLTGGDNGLLDIPRPS---------LAVAGHTLWPLASPWQYYGFV 162

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  ++  ++  +  +        +RDN++   ++   +   KL AF +S A  G+AGA
Sbjct: 163 AALFLVAFWLLRRVCDSVFGRTLLAVRDNEERAAAVGYDLRLLKLQAFVISGAVTGLAGA 222

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
             A           ++  + ++I + ++GG  +L       A  + + +    +   +
Sbjct: 223 LHAMMTGIAPLSNAEYHTSEMIIVMTVIGGTGNLLASVLGAAFYVLLGDWLSTLWPRW 280


>gi|28379418|ref|NP_786310.1| branched-chain amino acid ABC transporter, permease protein
           [Lactobacillus plantarum WCFS1]
 gi|28272257|emb|CAD65168.1| branched-chain amino acid ABC transporter, permease protein
           [Lactobacillus plantarum WCFS1]
          Length = 320

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 138/339 (40%), Gaps = 43/339 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +     + V+  +++           +I++M + I I V+ A GL++++G  G  SL 
Sbjct: 6   KTNMAWLGVMVIGFVVIDGLELMGVINSFIENMLVTIGINVILAVGLNLIIGFAGQFSLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
            V   AIGAY+  I+          +L + V  +I+    +I+G+P+L+ RGDYLAIAT+
Sbjct: 66  HVGFMAIGAYATGIMTQTMATPAGFYLSMIVGMVIAMVAAVIVGIPTLRLRGDYLAIATM 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +EI + ++   K                                  F I  +  +  +
Sbjct: 126 GAAEIIRILINNLKITNGAA--------------------------GLFNIPALASWATV 159

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  L+  I +    +    A   +RD++ A  ++       KL+AF   +A   + G+
Sbjct: 160 YVLMCLTTIITVNFIHSRGGRAVMAVRDDELAAGAMGINTTRWKLAAFVFGAATAAIGGS 219

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             AA    I+P  F    +I ++ IV+LGG+ S++    A  +L  +  +          
Sbjct: 220 LHAAYIQTIAPGDFNIMASIAILIIVVLGGVGSITGTFVAAIVLGALDTILQNF------ 273

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                          +  +AL L+++ +   LL     S
Sbjct: 274 ---------GTIRMIIYSLALILIMIFKPAGLLGTWEFS 303


>gi|296268410|ref|YP_003651042.1| inner-membrane translocator [Thermobispora bispora DSM 43833]
 gi|296091197|gb|ADG87149.1| inner-membrane translocator [Thermobispora bispora DSM 43833]
          Length = 352

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 51/321 (15%), Positives = 112/321 (34%), Gaps = 20/321 (6%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           + L          +  +   + +    A    ++ G  GLLS    +  A+G Y+  I+ 
Sbjct: 46  VPLLFDGPLGSPGVLHVLSLMCVMAAVAVTYDLLFGFTGLLSFGHGLYVALGMYTTGIVL 105

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           +   L     +   A++     +++G   L+  G   A+ATL   +     +++      
Sbjct: 106 THTDLGFAGAVAWVAVLGLVVPLVLGAICLRVGGIAFAMATLAFGQAGAIFVVR------ 159

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                    R+      +         P   VI     Y++ L +  ++ +++ W   + 
Sbjct: 160 ------DPLRITGGELGLALPYEKLPEPLVGVINAGNRYWLALALLVVTYAVVRWALASR 213

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
               WR IRDN+     L       KL AF +SS    +AG  +A        ++ + + 
Sbjct: 214 PGRVWRAIRDNETRVLVLGLRPYAFKLMAFVLSSFLASLAGLVYALIAGGAHAEVTEATF 273

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
            + ++ +V+LGG            +   +      ++      L +           ++ 
Sbjct: 274 TLGLLVMVVLGGSGHPYGALIGGLVYTYLNHRLGQLSTTLGGPLSEP--------LFILG 325

Query: 326 IALFLVILMRSHSLLRLRTPS 346
           +   ++IL     ++ L   +
Sbjct: 326 VLFVVLILFLPGGIVSLVRRT 346


>gi|6822085|emb|CAB70950.1| putative membrane protein [Nostoc sp. PCC 7120]
          Length = 373

 Score = 93.0 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 49/350 (14%), Positives = 102/350 (29%), Gaps = 28/350 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++      ++ +  VV   L+ + +      ++  ++  + L   + A G+ ++ G  GL
Sbjct: 1   MKKGGRLILIEVGVVVAIALILILIMPLVLSEFRLNLLGRFLSLAIVALGIDLIWGYTGL 60

Query: 66  LSLNCVIAYAIGAYSYVIL--------------GSRYGLSIWLLIPVSAMISGACGMIMG 111
           LSL   I + +G Y+  +                +      +L               + 
Sbjct: 61  LSLGHGIFFGLGGYAIAMYLKLLKSQRVSYLISWNCMVSRNFLGFGGPFYSFPIAVAAVV 120

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           +      G    +      +     ++    I           + +     +      F 
Sbjct: 121 IIPGLLAGLLGYLVFRNRIKGVYFSILTQAAIIVFFNFFNGQQQFFNGTNGLIDFTTLFG 180

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
              S    +   Y + +     +  I  WL           IRD++             K
Sbjct: 181 ATVSDPKTKFIFYTLTVLFLAATYGICRWLTSGRFGRLLIAIRDDESRVRFSGYDPTDFK 240

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              FAVS A  G+AGAF+      +SP     + +I ++  V +GG  +L      T ++
Sbjct: 241 TLVFAVSGAIAGIAGAFYTLQSGSVSPRAMDIAFSIEMVIWVAVGGRATLIGAVLGTLLV 300

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                                   F             +V+ +    L+ 
Sbjct: 301 NYARAFLSE--------------QFAEIWLFFQGALFLIVVTVLPDGLVG 336


>gi|86750999|ref|YP_487495.1| ABC transporter ATPase component [Rhodopseudomonas palustris HaA2]
 gi|86574027|gb|ABD08584.1| ABC transporter ATPase component [Rhodopseudomonas palustris HaA2]
          Length = 954

 Score = 93.0 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 57/306 (18%), Positives = 113/306 (36%), Gaps = 22/306 (7%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y  ++   + +  +   GL ++ G  GL S        IGAY    + S YGLS WL 
Sbjct: 389 SNYEIALLNYVGLAAIVVLGLVLLTGVAGLTSFAQAAYVGIGAYITGYVSSVYGLSPWLT 448

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +P++  ++    +   L + +  G YL +ATL ++ +   +       T G+AG+     
Sbjct: 449 LPMALAVAFVLALFGSLITARLSGHYLPLATLSLAVVAYYLFAALPQ-TGGQAGMTNIPP 507

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           L                    ++     Y  + G   L    +  L  +    A R ++ 
Sbjct: 508 LT--------------ILGIAIVSPKAWYVGIWGALLLLQLAMANLLDSRPGRAIRALKS 553

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
                 SL      AK++AF ++     +AG F+A  +  ++P  F F++ I  + + ++
Sbjct: 554 GTIMAESLGVDTWRAKIAAFVIACLLAALAGWFYAHYQRFLNPSPFSFNQGIEYLFMAVI 613

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  S+      + I++   +               F          +  +A   ++ + 
Sbjct: 614 GGAGSIGGALVGSGIVVLANQWLQTNLPLVLGMQGDF-------QVIIFGVAAMAMLQLL 666

Query: 336 SHSLLR 341
              +  
Sbjct: 667 PRGIWP 672


>gi|322517392|ref|ZP_08070266.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus
           vestibularis ATCC 49124]
 gi|322123990|gb|EFX95546.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Streptococcus
           vestibularis ATCC 49124]
          Length = 316

 Score = 93.0 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 75/337 (22%), Positives = 137/337 (40%), Gaps = 42/337 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + I   L +   L+L     +     Y   + + I I ++   G ++V+G  G  +L 
Sbjct: 6   KVNLIWFGLIIGLFLILKGLELSGIMNLYYIQILMGIGISILMGLGTNLVLGFSGQFTLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAYS  I+          +L + V  +I+    +I G+P+L+ +GDYLAIATL
Sbjct: 66  QAGFMAIGAYSSAIITGMMPTYDGFYLSMVVGVIIAAVVALIFGIPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            M+EI + I++    +TNG AG+                                   V+
Sbjct: 126 GMAEIIRIIIVNGGELTNGAAGLTGILPYTSWP-------------------------VI 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                +   ++L   R+A      T+R+++ A  S+   +   K+  F + +    +AG+
Sbjct: 161 YFFVVIITILVLNFLRSATGRQAITLREDEIAAESMGVNVTKMKVIIFVIGAMISAIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            + +    + P  F   ++I  + I +LGG+ S++    A  +L  +      +      
Sbjct: 221 LYVSYIGTVVPKDFTIMKSIDYLIIAVLGGLGSITGTIIAAVVLGIINMFLQNV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                    +     +  +AL LV+L R   LL  + 
Sbjct: 275 ---------SNLRMIIYALALILVMLFRPGGLLGTKE 302


>gi|311108397|ref|YP_003981250.1| urea ABC transporter permease UrtB 2 [Achromobacter xylosoxidans
           A8]
 gi|310763086|gb|ADP18535.1| urea ABC transporter, permease protein UrtB 2 [Achromobacter
           xylosoxidans A8]
          Length = 543

 Score = 93.0 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 82/291 (28%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY   ++ + +   +   +    + +      +       
Sbjct: 270 ITFGLMGVINMAHGELLMIGAYVTYVVQTAFRAWLPGWLDWYVLAALPLAFAVTALVGMA 329

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W        G+        +       +         +
Sbjct: 330 LER--TVIRWLYGRPLETLLATWGISLILMQGVRTLFGAQNVEVGNPGWMSGGVTVLGGL 387

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+   +   L  T +    R I  N++    +        + AF +
Sbjct: 388 VLSYNRLVIIGFAFFVVFLVWALLNHTRLGLFVRAITQNRRMADCVGVPTGRVDMLAFGL 447

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG   +   +            +    +V+LGG+  L+    A   L GV + 
Sbjct: 448 GSGIAGLAGVALSQLGNV--GPDLGRGYIVDSFMVVVLGGVGQLAGTVIAALGLGGVNKF 505

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     ++  + L +  R   L   R  S  
Sbjct: 506 LEPYTGAVMAK-------------ITILALIVLFVQKRPQGLFAPRGRSVE 543


>gi|126736786|ref|ZP_01752524.1| inner-membrane translocator [Roseobacter sp. CCS2]
 gi|126713757|gb|EBA10630.1| inner-membrane translocator [Roseobacter sp. CCS2]
          Length = 399

 Score = 93.0 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 60/363 (16%), Positives = 126/363 (34%), Gaps = 32/363 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +   I+  L +  P +L  F    +  ++      +  + +I+ +FA G +I+ G  G L
Sbjct: 10  RLLLIVIGLTMFAPFILNPFPEGAEMAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYL 69

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S         G+Y  V +     +++   I +S +I+G   +++G  SL+  G Y +I T
Sbjct: 70  SFGHAAFLGAGSYGAVWMFKLLSMNVLPAIAISVIIAGLFSLLIGFISLRRSGIYFSILT 129

Query: 127 LIMSEIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
           L  +++   +                     P   G +     +        +     F 
Sbjct: 130 LAFAQMSFALAYSVLTPITGGETGLQLALDDPRIFGASQTATGNIPVPSLFGLEMRSSFE 189

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
               +++      YY+       +  + + + R+      R I+ NQ             
Sbjct: 190 WEVGAWLFTFNAGYYLAAAFMIFAFYMSIRIFRSPFGMMLRAIKSNQTRMSYTGLNARPY 249

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
            L+AF +S  + G+AG   A+       +  +++ +  V+ + ILGG  +L        +
Sbjct: 250 TLAAFVISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLGAGM 309

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVILMRSH 337
           +     +   +N    +S   F                        + I   LV++    
Sbjct: 310 IKYFENIFSKINETILHSWFAFLPDGLENFVVAMIYPFIGKGWHLTLGIVFMLVVIFLPG 369

Query: 338 SLL 340
            L+
Sbjct: 370 GLV 372


>gi|146278256|ref|YP_001168415.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025]
 gi|145556497|gb|ABP71110.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025]
          Length = 358

 Score = 93.0 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 82/327 (25%), Positives = 138/327 (42%), Gaps = 15/327 (4%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  ++ FL L    +  + +++ +  LIY + A GL+I+ G  G +SL      A+GAY+
Sbjct: 31  VALVVGFLVLPFFMTDYWANAVFVPFLIYAIAAIGLNILTGYCGQVSLGTGGFMAVGAYA 90

Query: 81  YV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              ++ S   +SI + + ++  I+ A G++ GLPSL+ +G YLA+ATL        +  K
Sbjct: 91  VYKLMTSFPEVSIVIHVILAGGITAAVGVLFGLPSLRIKGFYLAVATLAAQFFLVWLFNK 150

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                N  A   +      L     +      +           Y       F  A I  
Sbjct: 151 VPWFYNYSASGQITAPERTLFGIAVTGANTPAW---------AKYLFCAVFLFALAWIAR 201

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP- 258
            L R  I   W  IRD   A   +    + AKLSAFAVSS FIG+AGA F A     +  
Sbjct: 202 NLTRGTIGRKWMAIRDMDIAAEIIGVNPLAAKLSAFAVSSFFIGIAGALFFAVYLGAAEV 261

Query: 259 -DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            + F   ++ +++ ++I+GG+ S+       A L+ +      +       L        
Sbjct: 262 GEAFGIQKSFLILFMIIIGGLGSIFGSFAGAAFLVLLPVFLKNV---LVGGLGWPSDLAA 318

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRT 344
                ++   +   +++  H L +L  
Sbjct: 319 HIELMILGGLIIGFLILEPHGLAQLWR 345


>gi|288555728|ref|YP_003427663.1| branched chain amino acid ABC permease [Bacillus pseudofirmus OF4]
 gi|288546888|gb|ADC50771.1| branched chain amino acid ABC permease [Bacillus pseudofirmus OF4]
          Length = 333

 Score = 93.0 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 54/312 (17%), Positives = 124/312 (39%), Gaps = 29/312 (9%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
                  +Y   + I + I+ +  +GL+ + G  G LSL     +AIGAYS  +L    G
Sbjct: 20  FPILVPNQYYLQILILVFIWTIAVYGLNTITGLTGQLSLAHAGFFAIGAYSLGLLTINAG 79

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +  W    ++ +I+      +G+ +L+ +  +      +       ++I    +T G  G
Sbjct: 80  IPFWAAFVLAIVITTIISFFIGIVALRTK-SHFFAIYTMSVGFLIYLIIYKSELTGGVRG 138

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +        +G      I+               YY++L    L+   +  L  + +   
Sbjct: 139 LIGIPNPAPIGPLTFESIQ-------------SYYYLMLFFLLLTIFFMYRLFHSLLGKT 185

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
           +  IR++++   +L  +++  KL AF +S+    ++GA +A+    + P M        +
Sbjct: 186 FVAIRNSEELAETLGISVMRNKLLAFVISAGVASLSGALYASYVRFLGPQMADIHVAFEI 245

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           +  +++GG+ +L+     T I++ + ++   +  +                  +    + 
Sbjct: 246 LLYLLVGGIGTLAGPLIGTFIVVVLTQMLQFLEEF---------------RMLVFGPIVV 290

Query: 330 LVILMRSHSLLR 341
           L+IL     ++ 
Sbjct: 291 LLILFYPRGIVG 302


>gi|322419575|ref|YP_004198798.1| inner-membrane translocator [Geobacter sp. M18]
 gi|320125962|gb|ADW13522.1| inner-membrane translocator [Geobacter sp. M18]
          Length = 321

 Score = 93.0 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 61/320 (19%), Positives = 127/320 (39%), Gaps = 29/320 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +   L+   +    S  Y+ ++ + + I  M A GL++++G  G +SL     + +GAY 
Sbjct: 9   LVFALVVFLVPLPLSGGYLTNVLVFVGINSMLALGLNLLLGYAGQISLGQAAFFGLGAYG 68

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +L + Y ++ W+ + + A+        +G P L+ +G YLA+ATL +  I      + 
Sbjct: 69  SGVLTTLYAMNPWVAMILVALCVALFAFAIGFPVLRLKGHYLAMATLGVGVIVNIAFNET 128

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G +G+     L     T  + ++               YY++         + L 
Sbjct: 129 VDLTGGPSGLSGIPNLAIGSFTFDTDLKN--------------YYLVWCFALGMILLSLN 174

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  +      R I D++ A   +       K+  F +S+    +AG+ +      ISP  
Sbjct: 175 LVNSRFGRGLRAIHDSEVAARVMGVNARLMKVQVFTLSAFMSAIAGSLYCHVMTFISPAS 234

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F F  ++ +++++++GG+ S+        +L  + E+      Y                
Sbjct: 235 FSFHFSVELLTMIVIGGLGSVYGSILGALLLTLLPEMLRTFQDY---------------D 279

Query: 321 TTLMVIALFLVILMRSHSLL 340
             +  + L  + +     L 
Sbjct: 280 IIVYGLLLITMTIYLPGGLA 299


>gi|260427238|ref|ZP_05781217.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Citreicella sp. SE45]
 gi|260421730|gb|EEX14981.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Citreicella sp. SE45]
          Length = 327

 Score = 92.6 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 68/327 (20%), Positives = 117/327 (35%), Gaps = 31/327 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
             + +   L L    +  Y   +   +LI V+   G ++ +G+LG L+      + IGAY
Sbjct: 17  AFWAVPALLLLLPLATNPYTQFIANGMLISVLVTLGFTLTIGNLGQLAFANTAFFGIGAY 76

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGAC-GMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           +  IL ++ G+   L IP++         +         R  YLAI TL   E+ +   +
Sbjct: 77  ASAILAAKLGVPWLLTIPLAGAFGALGGFLASAAALRGIRTYYLAIITLAFGELMRWAYL 136

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
             KP+T G  G+ +                        +  +   +Y+ LG+  L     
Sbjct: 137 HAKPVTGGTDGMPMP---------------REALFGISLGDDSLKFYIFLGVTVLLVKAT 181

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           L L R+    A   +R+N+ A  SL        L  F  S   +G AGA FA     + P
Sbjct: 182 LNLMRSRFGRAVMAVRENEIATASLAIPTARVILVTFMWSGFVVGCAGALFARHVGHVFP 241

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F     I   ++V++GG+ S+        +L  + E                      
Sbjct: 242 ESFGMLHLIASFAMVLVGGLGSVLGAVLGAVLLTALPEYLRAF---------------PG 286

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345
                  + +  V++     L  L   
Sbjct: 287 MEELFFGLIVAGVLVAMPMGLASLLRR 313


>gi|257138231|ref|ZP_05586493.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis E264]
          Length = 570

 Score = 92.6 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/291 (12%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +     +        
Sbjct: 296 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPASFLAAAALGVV 355

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +                  +     S +         +
Sbjct: 356 LER--TVLRHLYGRPLETLLATFGVSLILIQATRTIFGAQNVQVVNPSWMSGGVTVMQNL 413

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 414 ILPYNRLAILAFALAVVGVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 473

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  ++        L  V + 
Sbjct: 474 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 531

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 532 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 569


>gi|294338620|emb|CAZ86949.1| putative ABC-type branched-chain amino acid transport system,
           permease component, livM [Thiomonas sp. 3As]
          Length = 331

 Score = 92.6 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 59/321 (18%), Positives = 132/321 (41%), Gaps = 26/321 (8%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L+L             + +  ++LIY + A GL++++G  G LS      + +G+Y 
Sbjct: 28  ILALVLLTAPAWLHYVGGYNDIASRVLIYGLAAMGLNLLLGHTGGLSFGHAAYFGLGSYG 87

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             ++      ++ L +    ++ G    ++   +++ RG Y A+ T+ + ++F  I I+W
Sbjct: 88  VGLMLKYMTHNVLLALLGGTLLGGVVAAVLAPIAVRRRGIYFAMITIAIGQMFYFIAIRW 147

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T G  G            T  S      F   + +  +  YY+++    L A ++  
Sbjct: 148 QAVTGGYDG-----------LTGFSRHTLHLFGFDWTMGSLGFYYLVVACFALGALVLWI 196

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +  + + + +  IR+NQK    L   +      +FA+S   + +AG   A   +  SP+ 
Sbjct: 197 VLNSPLGHTFVAIRENQKRLTFLGLPVQRYAAISFALSGLIVALAGGLNALLDNFTSPNT 256

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
             ++ +  ++ I +LGGM +        AI + V +    +   +               
Sbjct: 257 LNYTFSGDLVVIAVLGGMRNFWGPLVGAAIFVLVRDYASSVTDNW--------------- 301

Query: 321 TTLMVIALFLVILMRSHSLLR 341
            +++ +   L +L     ++ 
Sbjct: 302 MSVIGLIFVLSVLFFPLGVMG 322


>gi|291616196|ref|YP_003518938.1| BraD [Pantoea ananatis LMG 20103]
 gi|291151226|gb|ADD75810.1| BraD [Pantoea ananatis LMG 20103]
          Length = 521

 Score = 92.6 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 87/288 (30%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY+  ++ + +       I    +++      +       
Sbjct: 248 ITYGLLGVINMAHGEMLMLGAYATWMVQNLFQQFAPHYIGWYPLLALPVAFGLTAVIGMA 307

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 I   +     + +L  W         + +      L     + +         +
Sbjct: 308 LER--TIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNLEVANPAWLSGGLQVLPNL 365

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+L + F+     L L RT +    R +  N+              + AF +
Sbjct: 366 VLPWNRIAVILFVVFVLILTWLLLNRTRLGMNVRAVTQNRAMADCCGVPTGRVDMLAFGL 425

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+             I    +V+LGG+  L+    A   L  + ++
Sbjct: 426 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGTVVAALGLGILNKV 483

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                    L+++ + L I  R   L  ++  
Sbjct: 484 LEPQIGAVLGK-------------ILILVMIVLFIQKRPQGLFAVKGR 518


>gi|228476555|ref|ZP_04061237.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus salivarius SK126]
 gi|228251750|gb|EEK10815.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus salivarius SK126]
          Length = 316

 Score = 92.6 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 76/337 (22%), Positives = 137/337 (40%), Gaps = 42/337 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + I   L +   L+L     +     Y   + + I I ++   G ++V+G  G  +L 
Sbjct: 6   KVNLIWFGLIIGLFLILKGLELSGIMNLYYIQILMGIGISILMGLGTNLVLGFSGQFTLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAYS  I+          +L + V  +I+    +I GLP+L+ +GDYLAIATL
Sbjct: 66  QAGFMAIGAYSSAIITGMMPTYDGFYLSMVVGVIIAAIVALIFGLPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            M+EI + I++    +TNG AG+                                   V+
Sbjct: 126 GMAEIIRIIIVNGGELTNGAAGLTGILPYTSWP-------------------------VI 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                +   ++L   R+A      T+R+++ A  S+   +   K+  F + +    +AG+
Sbjct: 161 YFFVVIITILVLNFLRSATGRQAITLREDEIAAESMGVNVTKMKVLIFVIGAMISAIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            + +    + P  F   ++I  + I +LGG+ S++    A  +L  +      +      
Sbjct: 221 LYVSYIGTVVPKDFTIMKSIDYLIIAVLGGLGSITGTIIAAVVLGIINMFLQNV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                    +     +  +AL LV+L R   LL  + 
Sbjct: 275 ---------SNLRMIIYALALILVMLFRPGGLLGTKE 302


>gi|161521636|ref|YP_001585063.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
 gi|189352198|ref|YP_001947825.1| branched-chain amino acid ABC-type transport system permease
           component [Burkholderia multivorans ATCC 17616]
 gi|160345686|gb|ABX18771.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
 gi|189336220|dbj|BAG45289.1| branched-chain amino acid ABC-type transport system permease
           component [Burkholderia multivorans ATCC 17616]
          Length = 603

 Score = 92.6 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 75/324 (23%), Positives = 131/324 (40%), Gaps = 33/324 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+V  + L + L    +  Y+        +Y + A  L++V G++G +SL       IGA
Sbjct: 312 AIVALVALAVVLPWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGA 371

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L S  G S  + IP +  I+   G ++  P+ + RG Y++IATL + E+   +++
Sbjct: 372 YASALLSSDLGWSPAVTIPCAGAITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVIL 431

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  +T G  GI     L +                         Y+  L +    A + 
Sbjct: 432 NWDGLTRGPLGITGIAPLPW------------------ASTAQAAYWFTLTVLVAFALVQ 473

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L R+ +    R +R++  A  +        K  AFAV     G++G   A     I+ 
Sbjct: 474 VRLLRSHLGRTLRAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINH 533

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F    +I+ +++VILGG+ ++         LIG+ EL      Y              
Sbjct: 534 QTFDSQVSILALTMVILGGLGNVLGGIAGALALIGLPELFRWAADY-------------- 579

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
               +  + L L++  R   LL  
Sbjct: 580 -RMLIYGLVLLLLVRFRPQGLLGT 602



 Score = 89.5 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 106/305 (34%), Gaps = 25/305 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  I   IY + A GL+++ G   L++      Y +GA+   +  +R+GL + + +
Sbjct: 6   DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +  GA G+ +    L+       IA L+ +     IL +   +  G     V   L
Sbjct: 66  AAVLLGCGALGVAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                        +       +A +  +LR T +  A R    +
Sbjct: 126 PDWH-----------LRLGGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +     + FA++ A  G++G       + I P M  F   +  +  +++G
Sbjct: 175 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++      + +L  V      +    +  L  F               L + ++ R 
Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280

Query: 337 HSLLR 341
           + L  
Sbjct: 281 NGLFS 285


>gi|91782151|ref|YP_557357.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|296162012|ref|ZP_06844811.1| urea ABC transporter, permease protein UrtB [Burkholderia sp.
           Ch1-1]
 gi|91686105|gb|ABE29305.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia xenovorans LB400]
 gi|295887756|gb|EFG67575.1| urea ABC transporter, permease protein UrtB [Burkholderia sp.
           Ch1-1]
          Length = 552

 Score = 92.6 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/291 (12%), Positives = 79/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ + +            +++              
Sbjct: 278 ITYGLIGVINMAHGEFLMIGAYATYVVQNLFQRFAPGAFDWYPLLAVPASFAAAGIVGIV 337

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     + +         +
Sbjct: 338 LER--LVLKHLYGRPLETLLTTFGVSLILIQATRMLFGAQNVQVVNPAWMSGGVTVLPNL 395

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 396 ILPYNRLAILAFSLIVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 455

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  L+        L  V + 
Sbjct: 456 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTVIGGFGLGLVSKA 513

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 514 IEPFWGAVLAK-------------IAVLVLIVLFIQKRPQGMFALKGRSAE 551


>gi|167835749|ref|ZP_02462632.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia thailandensis
           MSMB43]
          Length = 316

 Score = 92.6 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 99/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           I +  +   +Y + A G ++V G LG+++        +GA   +   +            
Sbjct: 8   ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAITVLQNHFPGLGHV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +   I+      +G    +     L  A  +   I    +                
Sbjct: 68  ATLTIGLGIAAVVCACVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMMIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    +++    + A ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIRAGENNPGAVISMTEITIIIVAFLVMAGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 AENPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|325273293|ref|ZP_08139570.1| inner-membrane translocator [Pseudomonas sp. TJI-51]
 gi|324101578|gb|EGB99147.1| inner-membrane translocator [Pseudomonas sp. TJI-51]
          Length = 339

 Score = 92.6 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 111/301 (36%), Gaps = 24/301 (7%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++  +ILI+ + A   ++++G  GLLS    I + +GAY   +L       ++  +  +A
Sbjct: 36  TLATEILIFALAALACNLLLGYTGLLSFGQGIFFGVGAYGAALLMIHLQWGMFAALLGAA 95

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +      +++G  +++  G Y  + TL  S++   +       T G  G+    R     
Sbjct: 96  VFGAFLALLVGALAIRRTGIYFVMLTLAFSQMAYFLAYTLSGWTGGDNGLLDVPRP---- 151

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                 I         +      Y  +  +  L  +  L + R+   +    IR+N+   
Sbjct: 152 -----NIEIAGHMLVDLADPRHFYVFVAVLFLLIFAGALRVIRSPFGSTLLAIRENETRA 206

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++       K+  F +S A  G+AGA +A               +  ++ + I+GG  S
Sbjct: 207 AAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENILIMTIVGGTGS 266

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L         ++ + ++   +   +                 L+ + L LV++     L 
Sbjct: 267 LFGSLLGAGAIVLLGDVLSELWPRW---------------LMLLGVILILVVVFMRGGLW 311

Query: 341 R 341
            
Sbjct: 312 G 312


>gi|221210797|ref|ZP_03583777.1| inner-membrane translocator [Burkholderia multivorans CGD1]
 gi|221169753|gb|EEE02220.1| inner-membrane translocator [Burkholderia multivorans CGD1]
          Length = 603

 Score = 92.6 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 75/324 (23%), Positives = 131/324 (40%), Gaps = 33/324 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+V  + L + L    +  Y+        +Y + A  L++V G++G +SL       IGA
Sbjct: 312 AIVALVALAVVLPWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGA 371

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L S  G S  + IP +  I+   G ++  P+ + RG Y++IATL + E+   +++
Sbjct: 372 YASALLSSDLGWSPAVTIPCAGAITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVIL 431

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  +T G  GI     L +                         Y+  L +    A + 
Sbjct: 432 NWDGLTRGPLGITGIAPLPW------------------ASTAQAAYWFTLTVLVAFALVQ 473

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L R+ +    R +R++  A  +        K  AFAV     G++G   A     I+ 
Sbjct: 474 VRLLRSHLGRTLRAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINH 533

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F    +I+ +++VILGG+ ++         LIG+ EL      Y              
Sbjct: 534 QTFDSQVSILALTMVILGGLGNVLGGIAGALALIGLPELFRWAADY-------------- 579

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
               +  + L L++  R   LL  
Sbjct: 580 -RMLIYGLVLLLLVRFRPQGLLGT 602



 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 106/305 (34%), Gaps = 25/305 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  I   IY + A GL+++ G   L++      Y +GA+   +  +R+GL + + +
Sbjct: 6   DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +  GA G+ +    L+       IA L+ +     IL +   +  G     V   L
Sbjct: 66  AAVVVGCGALGVAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                        +       +A +  +LR T +  A R    +
Sbjct: 126 PDWH-----------LRLGGATLGALDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +     + FA++ A  G++G       + I P M  F   +  +  +++G
Sbjct: 175 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++      + +L  V      +    +  L  F               L + ++ R 
Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280

Query: 337 HSLLR 341
           + L  
Sbjct: 281 NGLFS 285


>gi|229079138|ref|ZP_04211687.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus Rock4-2]
 gi|228704155|gb|EEL56592.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus Rock4-2]
          Length = 317

 Score = 92.6 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 57/322 (17%), Positives = 125/322 (38%), Gaps = 31/322 (9%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY   +
Sbjct: 2   LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61

Query: 84  LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           L  R      +  + I  + ++S     I+GL SL+ +  + A+ TL +S++F  +  KW
Sbjct: 62  LFDRQGVSITNFLIGIVAAIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T+G  G        F                         YYV L        ++  
Sbjct: 122 RGLTHGGDGFTFGVPEIFRDRF-------------------TFYYVSLVCLCFIFILLRL 162

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++  +
Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGIVAAISGGLFVITLRFVNTTV 222

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F     +  + + ++GG+ +L      + I+  +      +   Y             R 
Sbjct: 223 FSIEMTLNALLMTMIGGVGTLIGAIAGSGIIESLKYYLSELATEY---------PIFERW 273

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
           T ++ +   +V+L+    L+  
Sbjct: 274 TIILGLLYIIVLLVFPKGLVGT 295


>gi|331696302|ref|YP_004332541.1| ABC transporter-like protein [Pseudonocardia dioxanivorans CB1190]
 gi|326950991|gb|AEA24688.1| ABC transporter related protein [Pseudonocardia dioxanivorans
           CB1190]
          Length = 624

 Score = 92.6 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 60/292 (20%), Positives = 111/292 (38%), Gaps = 15/292 (5%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           S+ I ++IY M A  L++++G  G  S+        G Y   +LG+   L   L++ +  
Sbjct: 55  SIAITVMIYAMCAMALTVLMGWAGQPSIMSAGLLIAGGYCAALLGTWAELPFLLVLVLVL 114

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +     G++  LP+ +  G YL ++TL +  +  N+    + +    AG  +     F  
Sbjct: 115 VAGFVFGLLAALPARRLGGIYLLLSTLAIFYLITNVGNYVQTVEKAYAGFTLPYASIFGF 174

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                   F                V   + F       +LR T I  AW  ++++  A 
Sbjct: 175 DLDSPSRWFP---------------VCAVVLFCVYEYFRYLRSTRIGRAWILLKEHPDAA 219

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
                 +     +AFA ++AF  +AGA  A      S D     +++  I +++LG + S
Sbjct: 220 RVAGIRVQAYIGTAFATTTAFHFVAGALLANFIGSASYDSVTLLDSVNFIVMIVLGTIGS 279

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           L        I+  V  L          S    D    +      +I + +++
Sbjct: 280 LPGAIIGAVIISAVPPLINTFFGSGNASGFVSDNLLAIELIVFALIGIVVLL 331


>gi|239816456|ref|YP_002945366.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239803033|gb|ACS20100.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 328

 Score = 92.6 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 58/327 (17%), Positives = 132/327 (40%), Gaps = 16/327 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +  VVY +LL   + A     Y   +  ++L + +FA   ++++G  G+LS         
Sbjct: 4   ISLVVYGVLLLALIAAPFIGFYPVFVM-KVLCFALFACAFNLLLGYTGMLSFGHAAFLGG 62

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
            AY        + L+  L +    +     G++ G  +++ +G Y ++ TL ++++   +
Sbjct: 63  SAYLTGHALKVWHLTPELGLIAGTLAGALLGLVFGWLAIRRQGIYFSMITLALAQMMYFV 122

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            ++    T G+ G+    R                F    +  ++ MYYV L +   +  
Sbjct: 123 ALQAP-FTGGEDGLQSVPR-------------GKLFGLIDLRDDLTMYYVALVIVVAAFL 168

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +I     +      + I++N+    SL   +   KL AF +S+A  G+AG+         
Sbjct: 169 LIARTVHSPFGQVLKGIKENEPRAISLGYDVNRFKLLAFVISAALSGLAGSLKTLVLGFA 228

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCS 315
           S     ++ +  VI + ++GG+ +LS     +A+++ +         +    + + +  +
Sbjct: 229 SLSDVHWTASGHVILMTLVGGLGTLSGPLVGSAVVVLLENKVGDFGSFMAHLTGVDWFNT 288

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                T +  +   + +L     ++  
Sbjct: 289 LGESVTMVTGLIFVICVLAFRRGIMGE 315


>gi|15612812|ref|NP_241115.1| ABC transporter (permease) [Bacillus halodurans C-125]
 gi|10172861|dbj|BAB03968.1| ABC transporter (permease) [Bacillus halodurans C-125]
          Length = 367

 Score = 92.6 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 106/336 (31%), Gaps = 27/336 (8%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +++ +++ L +       +  ++  + + + +   GL ++ G  G+LSL   I + +GAY
Sbjct: 16  LMFLIIVLLLVLPFFLSDFRTNLLGRYIAFAILVLGLDLLWGYTGVLSLGHGIFFGLGAY 75

Query: 80  SYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
              +  S            +W  I    ++                   L  + L     
Sbjct: 76  IMAMYLSLEGMTGAVPDFMLWNGITGLPLLWQVFSNPFIAIIGAVTIPMLIASLLAFFTF 135

Query: 133 ------FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
                     ++    +      I     +      +      F +  S    +  +YY+
Sbjct: 136 RNRIKDVYFTILTQALVLVMVTLIVSQQSITGGTNGLTGFSTIFGYSLSSASTQQVLYYL 195

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            LG   L   +   L  +    A   IRD +             K++ F +S+   G+AG
Sbjct: 196 TLGCLILVFLLCAALVNSRFGRALVAIRDGENRLRFSGYDTSMFKVAIFTLSAGIAGLAG 255

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             +      I+P M     +I +I  V +GG  +L        +                
Sbjct: 256 MLYVLQVGMITPSMIGIIPSIEMILWVAIGGRGTLIGPVIGALV--------------TN 301

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           ++   F  S       L+     +++L     ++ L
Sbjct: 302 SAKTFFSESHPEAWLYLLGTVFVVIVLFLPGGIMSL 337


>gi|116747761|ref|YP_844448.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
 gi|116696825|gb|ABK16013.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
          Length = 326

 Score = 92.6 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 65/323 (20%), Positives = 130/323 (40%), Gaps = 29/323 (8%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  LLL           Y   + I  L++V+     +++ G  G +S    I + IGAY+
Sbjct: 9   LVILLLLAVFPLVIQSDYYRHILIIALMWVVIGSSWNLLSGYTGQVSFGHAIFFGIGAYT 68

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +  ++  +S W  + +   ++   G+++G    + RG Y A+AT+ + EIF+ +  +W
Sbjct: 69  AGLCTTQLDISAWYGMLLGGPVALLIGLVIGWICFRLRGPYFALATIAVGEIFRLVATEW 128

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
              T G  GI                             +I  YY+ LG+       I  
Sbjct: 129 VDFTEGMQGI---------------------LIIQTFRSKIPYYYLALGLAAACIYSIHT 167

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +  +     +  IR++Q A  +L  +    K  +  +S+ F G+AGAF+      I P +
Sbjct: 168 VMNSKWGYYFLAIREDQDAAEALGISSFRYKSLSLMISAFFTGLAGAFYMNYMAFIDPQV 227

Query: 261 FKFSENIIVISIVI--LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                 I +++I++  +GG+ +L        I++ + E      F      +      + 
Sbjct: 228 VFSLHFISIMAILVGIIGGVGTLWGPPTGAFIMVLLQETFRSAFFGMLPKWV------SE 281

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
            H  +  + +  VI   ++ ++ 
Sbjct: 282 AHVLVFGLLVIFVIRYMANGIVG 304


>gi|171060321|ref|YP_001792670.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
 gi|170777766|gb|ACB35905.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
          Length = 335

 Score = 92.6 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 51/323 (15%), Positives = 109/323 (33%), Gaps = 18/323 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             V      L +    S  Y   +  +I+I+ + A  L ++VGS GL+       + IGA
Sbjct: 7   LFVALCFALLAVYPLVSGSYGIDLVSKIMIFAVLALSLELLVGSTGLVCFGQAAFFGIGA 66

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+ V+L      +    +  +++++ A   ++             I   +        ++
Sbjct: 67  YAAVLLSPEGEAAALWWVLPASVLAAALFALLMGALSLRTKGVYFIMVTLAFAQMAYYIV 126

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
              P+  G  GIY+  +           +         +   +  Y             +
Sbjct: 127 HDTPLGGGTDGIYLYVKPV---------LALGGATLIDLDRPMLFYAFTWACLLGVFGFL 177

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+    A   I+ N++   +   +    KL+AF +S    G+AG  F      ++P
Sbjct: 178 ALLLRSRFGRALAGIKVNEQRMRATGFSTYPYKLAAFVISGGIAGLAGFLFGVKDGFVNP 237

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           ++  +  +  V+ ++ILGG+  L            + E                  +F  
Sbjct: 238 ELMSWHMSGAVLIMIILGGLGHLRGALIGAFAFALLQEFFKS---------EAIFGAFAK 288

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
                + + +   + +    L+ 
Sbjct: 289 HWHLGLGLTIIASVALLPRGLVG 311


>gi|163744565|ref|ZP_02151925.1| high-affinity branched-chain amino acid transport system permease
           protein [Oceanibulbus indolifex HEL-45]
 gi|161381383|gb|EDQ05792.1| high-affinity branched-chain amino acid transport system permease
           protein [Oceanibulbus indolifex HEL-45]
          Length = 356

 Score = 92.6 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 67/321 (20%), Positives = 119/321 (37%), Gaps = 7/321 (2%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A VY  ++ L L       Y+  +  Q+ I ++   G++I+ G  GL+SL      AIGA
Sbjct: 24  AFVYATIVALALFTAFGNDYLILIASQMGILLIAVVGINILTGYTGLVSLGHGAFVAIGA 83

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  I G+     I   +     +  A  +   +  L            +         I
Sbjct: 84  YAVTIFGNLGAGVIPAGLMPFISVPLAVALAAAVGVLVGLPSLRVKGLYLAVATLAANFI 143

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               I              + G  V             +  +  M+ ++  +  +S    
Sbjct: 144 VIFLIE-------EDLFAPWTGGMVGINTNVPNLLGWELDTKREMFGLIAVVGLVSLLAA 196

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L RT I  A+  IRD   +   L  +++  KL +FA+S+A+ G+AGA FA    RI P
Sbjct: 197 QNLIRTRIGRAFIAIRDRDYSAEILGISLLRYKLMSFALSAAYCGLAGALFAYFYARILP 256

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F+ + ++ +++ +I+GGM           I++ V EL   +                 
Sbjct: 257 EQFELALSLNLVAALIIGGMGRTMGPVFGVIIVVLVPELIKVLFGALAGDSAGAGQLRAP 316

Query: 319 RHTTLMVIALFLVILMRSHSL 339
                  + L L +L     +
Sbjct: 317 LQQIAFGVLLVLFLLKEPLGI 337


>gi|88854903|ref|ZP_01129569.1| putative branched chain amino acid transport system permease abc
           transporter protein [marine actinobacterium PHSC20C1]
 gi|88816064|gb|EAR25920.1| putative branched chain amino acid transport system permease abc
           transporter protein [marine actinobacterium PHSC20C1]
          Length = 345

 Score = 92.6 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 59/343 (17%), Positives = 116/343 (33%), Gaps = 8/343 (2%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +  ++     ++  L+  + L A      I  + +Q LI V+F  GLS+  G+ G++S 
Sbjct: 5   TRIRRLFETPILLVALMGLVALIAVFGDPTITRVTVQALIAVVFVAGLSLFSGNSGVMSF 64

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
             V   AIGAY+   L     L   +   +   +     +    P     G   A    +
Sbjct: 65  GHVGFMAIGAYTTAYLTIPVNLKSSMFSDLPESLGFLATIHAPFPIAVLVGGLAAAVLAL 124

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           ++      L   +          +A  +                 S   + +    +   
Sbjct: 125 VTAPIMARLGGLQ-----AGIATLALLVIVFTVLNSWTDVTRGSSSMIGLPKSTTIWWAA 179

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
           G+  L   I    +++      +  R++  A  +    +   ++ A+ +SS  +G AGA 
Sbjct: 180 GIAALVIVIAWAYKKSRSGLQLQASREDYLAATASGIAVGRHRVFAWVLSSIPVGFAGAL 239

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +A      +   F  S     I +++LGG  SLS        +  + E+        F  
Sbjct: 240 YAGFFTTFNSQTFFLSLTFSFIVMIVLGGYLSLSGAVIGALGVSVLQEILRRFQDGAFTG 299

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            +            ++   L  V++     L+  R    F +R
Sbjct: 300 GISLPAGIAD---LILAAVLLFVLVKAPLGLMGTRELRLFRKR 339


>gi|89897770|ref|YP_521257.1| hypothetical protein DSY5024 [Desulfitobacterium hafniense Y51]
 gi|89337218|dbj|BAE86813.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 361

 Score = 92.6 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 82/335 (24%), Positives = 139/335 (41%), Gaps = 23/335 (6%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  + +     L +V  L++ L +        +    + I  YV+ A  L++ VG LG L
Sbjct: 9   KTTRNNLYTYALVIVAYLIVQLLISGGNISSSLQGQLVPICAYVILAISLNLTVGILGEL 68

Query: 67  SLNCVIAYAIGAYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           SL      +IGA++ V+               + + + V A+ +G  G ++G+P L+ +G
Sbjct: 69  SLGHAGFMSIGAFAGVVACISLEQIIPITILRLIVSLIVGALFAGVAGFLIGIPVLRLKG 128

Query: 120 DYLAIATLIMSEIFQNILIKW-KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           DYLAI TL   EI +NI+      +      I        L       +          I
Sbjct: 129 DYLAIVTLAFGEIIKNIINILYVGLDKAGLHISFLSDSNALNLGEGGRVIIDGPLGITGI 188

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
            ++  + +   +  ++  I+L L  +    A   +RDN+ A  S+   I   KL AF  S
Sbjct: 189 PKLSTFTIGFVLILITLFIVLNLVDSRSGRAIMALRDNRIAAESVGIHITKYKLMAFVTS 248

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           +A  G AG  FA +   I    F F+ +I+++  V+LGG+ ++     A  +L  + EL 
Sbjct: 249 AALAGAAGTLFAMNYSTIIASKFGFNTSILILVFVVLGGLGNIRGSIIAATLLTILPELL 308

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
              N Y                  L  I L L++L
Sbjct: 309 REFNSY---------------RMLLYAIVLILIML 328


>gi|206562472|ref|YP_002233235.1| putative branched-chain amino acid transporter [Burkholderia
           cenocepacia J2315]
 gi|198038512|emb|CAR54470.1| putative branched-chain amino acid transporter [Burkholderia
           cenocepacia J2315]
          Length = 604

 Score = 92.6 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 71/319 (22%), Positives = 127/319 (39%), Gaps = 33/319 (10%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           +     L    +  Y+        +Y + A  L++V G++G +SL       IGAY+  +
Sbjct: 318 IAAAAVLPWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGAYASAL 377

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L S  G S  + IP + +I+   G ++  P+ + RG Y++IATL + E+   +++ W  +
Sbjct: 378 LSSDLGWSPAVTIPCAGVITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVILNWDGL 437

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
           T G  GI     L +                         Y+    +  + A + + L R
Sbjct: 438 TRGPLGITGIAPLPW------------------ATTARAAYWFTFAVLVVFALVQVRLLR 479

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           + +    R +R++  A  +        K  AFAV     G++G   A     I+   F  
Sbjct: 480 SHLGRTLRAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINHQTFDS 539

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
             +I+ +++VILGG+ ++         LIG+ EL      Y                  +
Sbjct: 540 QVSILALTMVILGGLGNVLGGIVGAIALIGLPELFRWAADY---------------RMLI 584

Query: 324 MVIALFLVILMRSHSLLRL 342
             + L L++  R   LL  
Sbjct: 585 YGLVLLLLVRFRPQGLLGT 603



 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 107/305 (35%), Gaps = 25/305 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  I   IY + A GL+++ G   L++      Y +GA+   +  +R+GL + + +
Sbjct: 7   DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVAL 66

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +  GA G+ +    L+       IA L+ +     IL +   +  G     V   L
Sbjct: 67  AAVVVGCGALGIAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 126

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             +          +       +A +  +LR T +  A R    +
Sbjct: 127 PDWHVR-----------IAGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +     + FA++ A  G++G       + I P M  F   +  +  +++G
Sbjct: 176 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++      + +L  V      +    +  L  F               L + ++ R 
Sbjct: 235 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 281

Query: 337 HSLLR 341
           + L  
Sbjct: 282 NGLFS 286


>gi|167035889|ref|YP_001671120.1| urea ABC transporter permease UrtC [Pseudomonas putida GB-1]
 gi|166862377|gb|ABZ00785.1| urea ABC transporter, permease protein UrtC [Pseudomonas putida
           GB-1]
          Length = 359

 Score = 92.6 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 100/324 (30%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
           A +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  ALQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      + L  L      L           + +     
Sbjct: 103 DGLPGFMTFLSWTELPWYWAGTQHFAWALCLVVLAPGLLALVFGWFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  +       ++ + +G+   S  + 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRTILGFDITAQGTRAVLFLLTVGLLLASLYLC 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WRLTRSKFGRLLTAVRDAENRMMFCGYDPRGFKLLVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     LV L     ++ L
Sbjct: 329 FWLFFLGALFILVTLYLPKGVVGL 352


>gi|298291374|ref|YP_003693313.1| urea ABC transporter permease UrtB [Starkeya novella DSM 506]
 gi|296927885|gb|ADH88694.1| urea ABC transporter, permease protein UrtB [Starkeya novella DSM
           506]
          Length = 539

 Score = 92.6 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 90/297 (30%), Gaps = 18/297 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G +G++++       +GAY+  ++          L   S +I+     +  
Sbjct: 260 AAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQELIRTYNPGLFDWSLIIAIPLAFLFT 319

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                       +   +     + +L  W      +  I              S      
Sbjct: 320 GLIGVIIER--TVIRFLYGRALETLLATWGISLILQQAIRTLFGPTNREVGAPSW-MSGS 376

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +       ++++    +  +++  LR T I    R +  N++   S+     +  
Sbjct: 377 FELGQMSITYGRLWIIVFAMLVFVALLATLRLTRIGLEMRAVTQNRRMAASMGIRTNWVD 436

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + S   G+AG   A S+          S  I    +V+ GG+ +L         L
Sbjct: 437 AMTFGLGSGIAGIAGV--ALSQIDNVSPNLGQSYIIDSFLVVVFGGVGNLWGTLVGAMSL 494

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +L                          +++ + L I  R   L  L+  S  
Sbjct: 495 GVANKLLEPYAGAVLGK-------------IALLVIVILFIQKRPRGLFALKGRSIE 538


>gi|332701783|ref|ZP_08421871.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332551932|gb|EGJ48976.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 380

 Score = 92.6 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 62/366 (16%), Positives = 129/366 (35%), Gaps = 37/366 (10%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            +  +  +  + ++  + L           Y+ ++ + + I ++ +  L+++ G++G  +
Sbjct: 22  FDLRNLSVPAILLIAFVGLLAACMTGALNLYMQTVLMFMGINIIMSTSLNLINGNMGEFA 81

Query: 68  LNCVIAYAIGAYSYVILGSRYGLS----------------IWLLIPVSAMISGACGMIMG 111
                  A+GAY   ++                         L + + ++ +   G+++ 
Sbjct: 82  CGHAAFMAVGAYVSSLVTVIMFTQSKFGAPLLPPELTLLAFPLALLIGSLAAALVGLLIA 141

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           +PS K RGDYLAI T+    I ++ +     I  G  G     R+         L     
Sbjct: 142 IPSFKTRGDYLAIITIAALYIVKSAIENIDAI-GGARGFMGMRRVTNAMEQTLDLPWM-- 198

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                          +      +  II     +        I  ++ A   ++      K
Sbjct: 199 ------------VIWIFIGTVFTVWIIRRYVSSTYGKGVMAICQDEVAAEIMSVNTNHIK 246

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           L  F +SS   G+AG  FA     I+P  F   ++   + +V LGGM S+S    +  + 
Sbjct: 247 LVTFMLSSGLAGLAGGLFAHVLGYINPGSFTILKSTEALVMVYLGGMGSISGAVMSAMLF 306

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFN------MRHTTLMVIALFLVILMRSHSLLRLRTP 345
             ++E    +  +    L              +    L+ + L L++  R   ++  R  
Sbjct: 307 TLLLESLRFIIPWIDQLLHLIHVLPAGYEISQVWKWVLIPLLLILLMQFRPEGIMGNREL 366

Query: 346 SNFLER 351
           S+   R
Sbjct: 367 SDIFPR 372


>gi|78188821|ref|YP_379159.1| branched-chain amino acid ABC transporter, permease protein
           [Chlorobium chlorochromatii CaD3]
 gi|78171020|gb|ABB28116.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Chlorobium chlorochromatii CaD3]
          Length = 333

 Score = 92.6 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 62/343 (18%), Positives = 131/343 (38%), Gaps = 28/343 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  +A    +   + L    +  YI  + I +L+    +   +I+ G  G  S      +
Sbjct: 4   MLFIAAFGVVAAIVPLLVGDNNPYILGILISLLMMAALSSAWNILGGYTGQYSFGHAAYF 63

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
             GAY+ ++L   +  +  L I +  + S    +I G    + RG Y  +A++ ++EI +
Sbjct: 64  GAGAYTTLLLVLNFNFNPLLSIALGIITSVIIALITGSIVFRLRGHYFGLASIAVAEIVR 123

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             ++ ++  T G  G+ +AD   +                  +  ++  YY +L +   +
Sbjct: 124 LAVLNFE-FTGGAQGLLLADLAMWDI---------------DLNSKLPFYYGMLIVLLAT 167

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +I  +  +       + IR++Q A  SL   I + K  +  +S+A   + G+ +     
Sbjct: 168 LAITAYTVKAKTGYYLQAIREDQDAASSLGINISYYKNKSLVISAALTSLLGSLYGLYIR 227

Query: 255 RI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC-----------GMN 302
            I +  +     +I +I   I+GG+ +L        +L+ + E+             G+ 
Sbjct: 228 FIDTHAVLDLRLSIEIILTAIIGGVGTLWGPVLGALVLVPLAEVLRSNLLGDMLVKAGIV 287

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                  +    +    H  +  I   L IL     +L L   
Sbjct: 288 SETSAIGIFLKENLAHAHVLVYGIITVLCILYLPKGILGLLRR 330


>gi|89899807|ref|YP_522278.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89344544|gb|ABD68747.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 333

 Score = 92.6 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 72/333 (21%), Positives = 126/333 (37%), Gaps = 30/333 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            +  LL      A  ++ Y       +L Y +   GL+I+ G  G +SL     +A+GAY
Sbjct: 24  WILLLLALAVGLAFVAKGYHLFQATMVLAYAIALLGLNILTGYNGQISLGHGAFFALGAY 83

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI- 138
              IL    G   W  +P + +     G + G P+LK  G YLA+AT  +      +L  
Sbjct: 84  VAAILMEHAGAPYWATVPAAGVFCLVVGYLFGRPALKLEGLYLALATFALGVAMPQLLKY 143

Query: 139 -KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
              +  T G  GI +       G  +                   +Y   LG+  +   I
Sbjct: 144 KHLEAWTGGVQGIVLMKPDAPFGLPLTQDQW--------------LYLFALGVAGVMFVI 189

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L ++    A R IRD+  A  ++       K  +F VS+A+ G+ GA  A +   +S
Sbjct: 190 AHNLLQSGSGRAMRAIRDHAMAAEAMGVDNRHYKSMSFGVSAAYTGVGGALSAIAVQFVS 249

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           PD F    +I ++  +++GG+ +L         ++ V  L   ++               
Sbjct: 250 PDSFTLFLSISLLVGIVVGGVGTLWGAFFGAMFIMFVPNLAEKVSKA------------- 296

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                +  + L  ++ +    ++ L    N   
Sbjct: 297 -APWAVYGVVLIAIMFVMPGGVMGLLRKLNERR 328


>gi|282864661|ref|ZP_06273716.1| inner-membrane translocator [Streptomyces sp. ACTE]
 gi|282560600|gb|EFB66147.1| inner-membrane translocator [Streptomyces sp. ACTE]
          Length = 653

 Score = 92.6 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 52/310 (16%), Positives = 105/310 (33%), Gaps = 27/310 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             VV  + + L  G   + + + ++G+Q  +  + A+G++ V+ S G + L+     A+ 
Sbjct: 31  ALVVLLVAMSLLSGDFLTTQNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVAALS 89

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A       +  G+ +WL + ++     ACG + G      +         ++        
Sbjct: 90  ATVLAWSATSAGVPVWLAVILAVATGIACGFVNGALVAYGKLPSFIATLAML-------- 141

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                         VA  L  + +    +               ++   +L M  +    
Sbjct: 142 -------------SVARGLSLVISQGSPIAFPDSVSVLGDTLGGWLPVPVLVMIAMGLLT 188

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L L RT I  +   I  N++A       +   KL+ +A+S  F  +AG   A+      
Sbjct: 189 ALILARTYIGRSMYAIGGNEEAARLSGLRVNKQKLAIYALSGLFAAVAGIVLASRLVSAQ 248

Query: 258 PDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           P   +  E   + ++VI      GG+   S       IL  +      ++   F   +  
Sbjct: 249 PQAAQGYELDAIAAVVIGGASLAGGVGKASGTLIGALILAVLRNGLNLLSVSAFWQQVVI 308

Query: 313 DCSFNMRHTT 322
                +    
Sbjct: 309 GVVIALAVLL 318


>gi|326316373|ref|YP_004234045.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323373209|gb|ADX45478.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 293

 Score = 92.6 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 71/307 (23%), Positives = 131/307 (42%), Gaps = 18/307 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ ++GI  LIY + A GL++  G   L++   V  +A+GAY+  +L  +    +    
Sbjct: 3   AYLCAIGIVALIYCLLALGLNLQFGLTRLVNFGVVAFFAVGAYTSGLLSLKGLP-LPACF 61

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + ++SG   + +GL SL+ R DYLAI TL  SE  +  + +   +TNG  G+    +L
Sbjct: 62  AAAGLLSGLLALPIGLLSLRLRDDYLAIVTLGFSEAVRITIQQESWLTNGVQGLPGLPKL 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           +                      ++ ++ VL  +  +     + L R+      + I D+
Sbjct: 122 FAAW--------------GPGTSDMAIFAVLAMIVGIVCWGTVRLTRSPFGRLLKAIGDD 167

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  +L       K+  F + +A  G+AGAF+A     I+P+ F       V   +++G
Sbjct: 168 EAALSALGKDPARFKVQVFMLGAALAGVAGAFYAHFITFITPEQFIPLITFYVWMGLVMG 227

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  ++      + +L+  +E       +        +          + +AL LV L R 
Sbjct: 228 GSGTVRGAMFGSLLLMVFLEGSRFAKDWVPGVS---EVGMASLRLAAVGLALILVTLYRP 284

Query: 337 HSLLRLR 343
           H L   +
Sbjct: 285 HGLFGGK 291


>gi|327396435|dbj|BAK13857.1| high-affinity branched-chain amino acid transport system permease
           protein BraD [Pantoea ananatis AJ13355]
          Length = 521

 Score = 92.6 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 87/288 (30%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY+  ++ + +       I    +++      +       
Sbjct: 248 ITYGLLGVINMAHGEMLMLGAYATWMVQNLFQQFAPHYIGWYPLLALPVAFGLTAVIGMA 307

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 I   +     + +L  W         + +      L     + +         +
Sbjct: 308 LER--TIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNLEVANPAWLSGGLQVLPNL 365

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+L + F+     L L RT +    R +  N+              + AF +
Sbjct: 366 VLPWNRIAVILFVVFVLILTWLLLNRTRLGMNVRAVTQNRAMADCCGVPTGRVDMLAFGL 425

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+             I    +V+LGG+  L+    A   L  + ++
Sbjct: 426 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGTVVAALGLGILNKV 483

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                    L+++ + L I  R   L  ++  
Sbjct: 484 LEPQIGAVLGK-------------ILILVMIVLFIQKRPQGLFAVKGR 518


>gi|313500825|gb|ADR62191.1| Branched-chain amino acid ABC transporter, permease protein,
           putative [Pseudomonas putida BIRD-1]
          Length = 359

 Score = 92.6 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 56/330 (16%), Positives = 100/330 (30%), Gaps = 27/330 (8%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L     A     Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +  
Sbjct: 37  LLPADHALHVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYL 96

Query: 86  S----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                            W  +P     +      + L  L      L           + 
Sbjct: 97  MRQAAGEGLPGFMTFLSWTELPWYWAGTQHFAWALCLVVLAPGLLALVFGWFAFRSRIKG 156

Query: 136 ILIKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           +           AG+ +  R    +       S      F  +       ++ + +G+  
Sbjct: 157 VYFSIMTQALTFAGMLLFFRNETGFGGNNGFTSFRTILGFDIAAQATRAVLFLLTVGLLL 216

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            S  +   L R+        +RD +             KL  + +S+   G+AGA +   
Sbjct: 217 ASLYLCWCLTRSKFGRLLTAVRDAENRMMFCGYDPRGFKLLVWVLSAVLCGLAGALYVPQ 276

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              I+P     + +I     V LGG  +L        ++ G+                 F
Sbjct: 277 VGIINPSEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------F 322

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             +F       +     LV L     ++ L
Sbjct: 323 TVAFPEFWLFFLGALFILVTLYLPKGVVGL 352


>gi|254452963|ref|ZP_05066400.1| branched-chain amino acid ABC transporter, permease protein
           [Octadecabacter antarcticus 238]
 gi|198267369|gb|EDY91639.1| branched-chain amino acid ABC transporter, permease protein
           [Octadecabacter antarcticus 238]
          Length = 630

 Score = 92.6 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 95/311 (30%), Gaps = 26/311 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLI 96
                   IY + A GL+I  G +G++++       +GAY+  ++          I + +
Sbjct: 341 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQQIVPDYTLSIIIAL 400

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++  ++ A G+ M    +     +  + TL+ +     +L +      G     +    
Sbjct: 401 PMAFAVTFAAGVAMERLVI-RHLYHRPLETLLATFGIAIVLQQLAKNIFGTQARPLTSP- 458

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     +      +  V        +          I+  L+RT +    R +  N
Sbjct: 459 --------DWLAGAWVVNDVVQISTIRIAIFALALLFLCLILYILKRTRLGLEVRAVTQN 510

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                S+        +  F + S   G+AG          S     +             
Sbjct: 511 PGMAASMGINPDRINMLTFGLGSGIAGIAGVAIGLYAKVTSEMGADYIVQ---------- 560

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
              S   +       +        +  +    +  F+ S  +   T M++ + L I  R 
Sbjct: 561 ---SFMTVVVGGVGNVWGTLAGASLIGFTQKGIEFFNPSNTLAAQTYMILFVILFIQFRP 617

Query: 337 HSLLRLRTPSN 347
             ++ L+  + 
Sbjct: 618 KGIVALKARAA 628


>gi|16329974|ref|NP_440702.1| hypothetical protein slr1201 [Synechocystis sp. PCC 6803]
 gi|1652460|dbj|BAA17382.1| slr1201 [Synechocystis sp. PCC 6803]
          Length = 410

 Score = 92.6 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 49/349 (14%), Positives = 102/349 (29%), Gaps = 36/349 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDS--------MGIQILIYVMFAWGLSIVVGSLGLL 66
           + + A +  ++  L L      +++ +        +  + L   + A G+ ++ G  GLL
Sbjct: 30  VLVFACIPLIIAVLSLSDGGPSQWLLNNFPFLRLRLMGRFLSLAIIALGIDLIWGYTGLL 89

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           SL   I +A+G Y++ +  +       L             +I              +  
Sbjct: 90  SLGHGIFFALGGYAFAMYLNLQLPEGQLPEFFGLYGVDKLPLIWQPFHSLPVTVLAMVLV 149

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF--------------FRF 172
                     LI    I      I     L           +               F +
Sbjct: 150 PGAIAALLGYLIFRNRIKGVYFSILTQAALLVFYNFFNGQQKLINGTNGLKTDTERIFGY 209

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
            +S    ++  Y V +    L   +  WL           IRD++             K+
Sbjct: 210 LASSDGVQLVFYEVTVLALLLVYILCRWLTSGRFGRILVAIRDDETRVRFTGYDPTGFKV 269

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             F +S A  G++G  +      I+P +   + +I ++  V +GG  +L      T ++ 
Sbjct: 270 LVFGISGAIAGLSGGLYTVQTGIITPSIMDVAFSIEMVIWVAVGGRATLVGAVLGTLLVR 329

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                                  F             +V+ +  + ++ 
Sbjct: 330 LAQSSLSE--------------QFPEVWLFFQGALFLIVVTVLPNGIVG 364


>gi|126736708|ref|ZP_01752447.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. CCS2]
 gi|126713823|gb|EBA10695.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. CCS2]
          Length = 646

 Score = 92.6 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 101/311 (32%), Gaps = 26/311 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLI 96
                   IY + A GL+I  G +G++++       +GAY+  ++          I + +
Sbjct: 357 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGFVVQQFVPDYTLSIIIAL 416

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++ +I+   G++M    +     +  + TL+ +      L +      G     +    
Sbjct: 417 PLAFVITFGAGVLMERTVI-RHLYHRPLETLLATFGISIALQQLAKNIFGTQARPLTSP- 474

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     +      +  V        + +        I+  L+RT +    R +  N
Sbjct: 475 --------EWLDGALIFNDVVAISYIRVAIFVLALVFLCIILFILKRTRLGLEVRAVTQN 526

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                S+        +  F + S   G+AG          S     +     +  +V   
Sbjct: 527 PGMAASMGINPDRINMLTFGLGSGIAGIAGVAIGLYAQVTSEMGASYIVQSFMTVVVGG- 585

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
            + ++       +++  + +    +N            S  +   T M++ + L I  R 
Sbjct: 586 -VGNVWGTLAGASLIGFLQKGIEWLNP-----------SNTLAAQTYMILFIILFIQFRP 633

Query: 337 HSLLRLRTPSN 347
             ++ L+  + 
Sbjct: 634 KGIVALKGRAA 644


>gi|225573611|ref|ZP_03782366.1| hypothetical protein RUMHYD_01805 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039029|gb|EEG49275.1| hypothetical protein RUMHYD_01805 [Blautia hydrogenotrophica DSM
           10507]
          Length = 315

 Score = 92.6 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 108/306 (35%), Gaps = 24/306 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      +Y + A G ++V G   +L+        IGAY  ++  ++ GLS  + +
Sbjct: 26  SYLINGLSLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGAYVTLMGMTKSGLSPIVSV 85

Query: 97  PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
            ++ ++  A GM++   +    R     +A LI +     +L     +  G         
Sbjct: 86  LIAVVVCTALGMVIERVAYKPLRNAASPLAVLITAIGVSYLLQNVALLIFGANAQSFPSA 145

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           + + G ++             +         ++    +   ++ +++++    A R + +
Sbjct: 146 VKWEGISLAD---------GALNVSGETIVTIVICVVIMVVLMTFIKKSKAGQAMRAVSE 196

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A   +   +       FA+ SA   +AG    ++   ++P        I      + 
Sbjct: 197 DKGAAQLMGINVNGTIALTFAIGSALAAIAGVLLCSAYPSLTPYT-GAMPGIKAFVAAVF 255

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S+        +L  +  L                         ++   L +V+L++
Sbjct: 256 GGIGSIPGAFIGGILLGIIEILGKAYISSQMADA-------------IVFAVLIIVLLVK 302

Query: 336 SHSLLR 341
              LL 
Sbjct: 303 PTGLLG 308


>gi|206901035|ref|YP_002250651.1| branched-chain amino acid ABC transporter, permease protein
           [Dictyoglomus thermophilum H-6-12]
 gi|206740138|gb|ACI19196.1| branched-chain amino acid ABC transporter, permease protein
           [Dictyoglomus thermophilum H-6-12]
          Length = 330

 Score = 92.6 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 54/311 (17%), Positives = 109/311 (35%), Gaps = 24/311 (7%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y   + I   I  + A  L+++ G  G  S+      A G Y    L   +G  I  L
Sbjct: 25  NPYFYQVLIFWGINSILAMSLNLINGFTGQFSIGHAGFMAAGGYLSAALTVYHGDKIIKL 84

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +           +      +      L  A L +      + +K   +     G     R
Sbjct: 85  LSFMPESISKNIVFFIFLIIGG----LFSALLGVIIGIPTLRLKGDYLAIATLGFGEIIR 140

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           +      V              I ++     ++   F+    +  +  ++   A  +IR+
Sbjct: 141 VIIYNMDVVG-----GARGFPGIPQLTNSVWVMFWAFICFITLYRIINSSHGRAIISIRE 195

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  ++     + K+ AF++ + F G+AG  F      + P  F F  ++ V+ +++L
Sbjct: 196 DETASEAMGVNTTYYKVLAFSIGAFFAGIAGGLFGHYLMLLHPASFTFMRSVEVLLMIVL 255

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ SL+       +L  + E   G +                    +  + L +++L+R
Sbjct: 256 GGLGSLTGSIIGAFVLTVLPEALRGFSG---------------LRLVIYSLTLIILMLIR 300

Query: 336 SHSLLRLRTPS 346
              L+  R  S
Sbjct: 301 PTGLMGNREIS 311


>gi|21221199|ref|NP_626978.1| bifunctional carbohydrate binding and transport protein
           [Streptomyces coelicolor A3(2)]
 gi|256787620|ref|ZP_05526051.1| bifunctional carbohydrate binding and transport protein
           [Streptomyces lividans TK24]
 gi|289771513|ref|ZP_06530891.1| bifunctional carbohydrate binding and transporter [Streptomyces
           lividans TK24]
 gi|6714794|emb|CAB66286.1| bifunctional carbohydrate binding and transport protein
           [Streptomyces coelicolor A3(2)]
 gi|289701712|gb|EFD69141.1| bifunctional carbohydrate binding and transporter [Streptomyces
           lividans TK24]
          Length = 651

 Score = 92.6 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 50/325 (15%), Positives = 105/325 (32%), Gaps = 39/325 (12%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +V  +++    G   +   + ++G+Q  +  + A+G++ V+ S G + L+     
Sbjct: 28  ALTALIVLVVVMSALSGDFLTADNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVA 86

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A       +  G+ + L + +S +   ACG++ G      +         ++     
Sbjct: 87  ALSATVLAWSATEAGMPVALAVLLSVLTGIACGLVNGFLISYGKLPPFIATLAML----- 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                            V   L  + +    +               ++   +L M  + 
Sbjct: 142 ----------------SVGRGLSLVISQGSPIAFPDSVSHLGDTLGGWLPVPVLVMIVMG 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT I  +   I  N++A       +   KL+ +A S  F   AG   A+   
Sbjct: 186 LITAFVLGRTYIGRSMYAIGGNEEAARLSGLRVKRQKLAIYAFSGLFAAAAGIVLASRLS 245

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P   +  E   + ++VI      GG    S       IL  +      ++   F   
Sbjct: 246 SAQPQAAQGYELDAIAAVVIGGASLAGGTGKASGTLIGALILAVLRNGLNLLSVSAF--- 302

Query: 310 LKFDCSFNMRHTTLMVIALFLVILM 334
                        ++ + + L +L 
Sbjct: 303 ---------WQQVVIGVVIALAVLF 318


>gi|300313933|ref|YP_003778025.1| branched-chain amino acid ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300076718|gb|ADJ66117.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 334

 Score = 92.2 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 50/296 (16%), Positives = 124/296 (41%), Gaps = 10/296 (3%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++  ++L++ + A G ++++G  GL+S    I + +G+Y+  ++  +  L++   + ++A
Sbjct: 28  TLATEVLVFALAALGCNLLLGYTGLMSFGQGIFFGVGSYTAGVVLLQLKLALLPALALAA 87

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +      +++G  S++ RG Y  + TL  +++F  +    K +T G  G+    R     
Sbjct: 88  LGGALVALLVGWFSIRQRGTYFVMLTLAFAQMFYFLAYTMKDVTGGDNGLLDIPRPP--- 144

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                 +  F             Y V+  +  L   ++  +  + +      +R+N+   
Sbjct: 145 ------LALFGLTLLPTTSSWQYYTVVAILFVLVFWLLQRVVDSVLGKTLLAVRENEARA 198

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +L   +   KL+AF +S A  G+AG   A           ++  +  ++ + ++GG  +
Sbjct: 199 SALGYDVRLLKLAAFVISGAVTGLAGGLHAMMTGVAPLSNIEYHTSEAILVMTVIGGTGN 258

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR-HTTLMVIALFLVILMR 335
           L       +  + V      +   +   L     + ++     L  +A+ ++  +R
Sbjct: 259 LFASVLGASFYVLVGNWLSTLWPRWLMLLGLLLIAVSLYMQKGLFGLAMKIIDAVR 314


>gi|110669468|ref|YP_659279.1| ABC-type urea transport system, permease protein II [Haloquadratum
           walsbyi DSM 16790]
 gi|109627215|emb|CAJ53705.1| ABC-type urea transport system, permease protein II [Haloquadratum
           walsbyi DSM 16790]
          Length = 396

 Score = 92.2 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 65/324 (20%), Positives = 114/324 (35%), Gaps = 15/324 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A     LL L +       Y        L Y +    LSI+ G  G+LS   V  + I  
Sbjct: 33  AAFGVGLLLLVVQPLIRGSYAAGQFSLFLAYGLLGLSLSIIWGYTGILSFGQVAFFGIAG 92

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y I+    G ++   + +   I+ A      L    F G    +   I++ +   +L 
Sbjct: 93  YTYAIVSLNLGGALGPTVALPVAIAVATISAFILGYFMFYGGVRNVYVAILTLVVTLVLE 152

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF-PSSFVIYEIFMYYVLLGMCFLSASI 197
            +   T G      + +L                  SSF +     Y+ +L +   +   
Sbjct: 153 TFMAQTAGAKWAIGSVKLGGFNGIPGIRNFTLGVGESSFSLSGSEFYWFVLAVLLFAYLG 212

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L  +    +   IR++++    L   +   KL+ F  S A  G++G F+A   + + 
Sbjct: 213 SRILVNSKYGYSLVAIREDEERTAMLGYNVKKVKLAVFTFSGALAGLSGIFYANWGNYMD 272

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P +F  +   I I  V LGG  SL      T I+  + +               F  + +
Sbjct: 273 PSVFTITFATIPIVWVTLGGRESLLGAIVGTVIIEWLRKW--------------FSINAS 318

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                 + + L + IL     +L 
Sbjct: 319 EFAIVFVGLILMITILFIPRGILP 342


>gi|260888352|ref|ZP_05899615.1| amino acid ABC transporter, permease protein [Selenomonas sputigena
           ATCC 35185]
 gi|330838329|ref|YP_004412909.1| ABC-type transporter, integral membrane subunit [Selenomonas
           sputigena ATCC 35185]
 gi|260861888|gb|EEX76388.1| amino acid ABC transporter, permease protein [Selenomonas sputigena
           ATCC 35185]
 gi|329746093|gb|AEB99449.1| ABC-type transporter, integral membrane subunit [Selenomonas
           sputigena ATCC 35185]
          Length = 317

 Score = 92.2 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 74/343 (21%), Positives = 135/343 (39%), Gaps = 41/343 (11%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           + L K D I  L  ++   +L   +       +     + + I ++    L+++ G  G 
Sbjct: 1   MNLRKQDLIFFLFGLILFAVLQGLITGRVIGSFWQLNLLFLGINIILTASLNLINGYTGQ 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
            SL      A+GAY+  IL + + +   L +   A+ +   G+++GLP+L+ RGDYLAIA
Sbjct: 61  FSLGHAGFMAVGAYAAAILTTNFHVPFPLALLAGAIAAAFLGVLIGLPTLRLRGDYLAIA 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL + EI + +LI    +  G AG     R                            + 
Sbjct: 121 TLGLGEIIRVVLINIDYV-GGAAGFKGIARDTN-------------------------FA 154

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            +    F++   I     +    A   IR+++ A  ++       K+ AFA+ + F G+ 
Sbjct: 155 WVFFAVFVTLFFIKNFVNSTHGRACIAIREDEIAAEAMGIPTTRYKVMAFAIGAGFAGLG 214

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  FA +   ++P  F F ++   + +V+LGGM SL+        +  +           
Sbjct: 215 GGLFAHTLTYLNPTSFTFMQSFFFLIMVVLGGMGSLTGSVVGAFFVTILQAALAS----- 269

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                     +      +  +AL L +L R   +      + F
Sbjct: 270 ----------WPEFRMIIFAVALILFMLYRPKGIFGYVELTAF 302


>gi|260222936|emb|CBA33001.1| hypothetical protein Csp_B16850 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 327

 Score = 92.2 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 71/310 (22%), Positives = 125/310 (40%), Gaps = 30/310 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
               + Y   +    L++V+   GL++ VG  G  SL     + IGAY+  IL       
Sbjct: 20  PPFLKNYGIYLLSYWLVFVIATMGLNLTVGYAGQKSLGHAAFFGIGAYTVAILMKAGFS- 78

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            WL +P +A+I    G+ +G P+L+ +  YLA ATL  +     ++   + +T G  GI 
Sbjct: 79  FWLGLPAAALICFFVGIALGFPALRVQTIYLAFATLGFNTAVWLVMRNEEWLTGGTFGIN 138

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              R    G ++                 +  YY +LG   +  ++   L R+    A+ 
Sbjct: 139 NIARPSLFGYSLEGN--------------LAYYYFVLGTAVVLGALQWGLLRSPWGKAFT 184

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +RDN     SL        L +FA+ + + G+AGA FA+    I P  F    +I++  
Sbjct: 185 ALRDNPIRAESLGINTRSYTLLSFAIGAVYAGVAGALFASLVQFIEPAPFTVGASIMMYL 244

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +V++GG          +A+ + + E                       +  +   A+ L+
Sbjct: 245 MVVVGGPGYFLGPLLGSAVGVILPEWLRF---------------AQAWYLFVFGSAVVLL 289

Query: 332 ILMRSHSLLR 341
           ++     LL 
Sbjct: 290 MIWLPDGLLS 299


>gi|167750013|ref|ZP_02422140.1| hypothetical protein EUBSIR_00981 [Eubacterium siraeum DSM 15702]
 gi|167657034|gb|EDS01164.1| hypothetical protein EUBSIR_00981 [Eubacterium siraeum DSM 15702]
 gi|291557910|emb|CBL35027.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           (TC 3.A.1.4.-) [Eubacterium siraeum V10Sc8a]
          Length = 293

 Score = 92.2 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 102/307 (33%), Gaps = 23/307 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             + +      IY + A G ++V G   +L+        +G Y      + + ++ +L +
Sbjct: 5   NNLINGISLGSIYAVIALGYTLVYGIAKMLNFAHGDVIMVGGYVIFYSMTSFSINPYLSV 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ ++    G+++   + K      +++ LI +      L     +  G+  +     +
Sbjct: 65  LIAVIVCTVLGIVIEKVAYKPLRQATSLSVLITAIGVSYFLQNSALLLFGEKPVNFTSVV 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                ++             V+        ++    +   + L++ +T    A   + ++
Sbjct: 125 NVPSISLFD---------GQVVITGEAIVAIVVSILIVIGLSLFINKTKSGRAMLAVSED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   I       FA+ S    +AGA   ++   +          I      + G
Sbjct: 176 KDAAQLMGININRTISLTFAIGSGLAAIAGALLCSAYPTLQNTT-GAMPGIKAFVAAVFG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        ++  +  L         +               ++   L LV++++ 
Sbjct: 235 GIGSVPGAMIGGILIGVIEILGRAYISPQLSDA-------------IVFAVLILVLIIKP 281

Query: 337 HSLLRLR 343
             +L  +
Sbjct: 282 TGILGKK 288


>gi|219670919|ref|YP_002461354.1| inner-membrane translocator [Desulfitobacterium hafniense DCB-2]
 gi|219541179|gb|ACL22918.1| inner-membrane translocator [Desulfitobacterium hafniense DCB-2]
          Length = 358

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 82/335 (24%), Positives = 139/335 (41%), Gaps = 23/335 (6%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  + +     L +V  L++ L +        +    + I  YV+ A  L++ VG LG L
Sbjct: 6   KTTRNNLYTYALVIVAYLIVQLLISGGNISSSLQGQLVPICAYVILAISLNLTVGILGEL 65

Query: 67  SLNCVIAYAIGAYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           SL      +IGA++ V+               + + + V A+ +G  G ++G+P L+ +G
Sbjct: 66  SLGHAGFMSIGAFAGVVACISLEQIIPITILRLIVSLIVGALFAGVAGFLIGIPVLRLKG 125

Query: 120 DYLAIATLIMSEIFQNILIKW-KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           DYLAI TL   EI +NI+      +      I        L       +          I
Sbjct: 126 DYLAIVTLAFGEIIKNIINILYVGLDKAGLHISFLSDSNALNLGEGGRVIIDGPLGITGI 185

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
            ++  + +   +  ++  I+L L  +    A   +RDN+ A  S+   I   KL AF  S
Sbjct: 186 PKLSTFTIGFVLILITLFIVLNLVDSRSGRAIMALRDNRIAAESVGIHITKYKLMAFVTS 245

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           +A  G AG  FA +   I    F F+ +I+++  V+LGG+ ++     A  +L  + EL 
Sbjct: 246 AALAGAAGTLFAMNYSTIIASKFGFNTSILILVFVVLGGLGNIRGSIIAATLLTILPELL 305

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
              N Y                  L  I L L++L
Sbjct: 306 REFNSY---------------RMLLYAIVLILIML 325


>gi|326790026|ref|YP_004307847.1| ABC transporter transmembrane protein [Clostridium lentocellum DSM
           5427]
 gi|326540790|gb|ADZ82649.1| ABC-type transporter, integral membrane subunit [Clostridium
           lentocellum DSM 5427]
          Length = 328

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 77/331 (23%), Positives = 153/331 (46%), Gaps = 45/331 (13%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           ++K + I  + A+    L+F+ +      ++  S+ + I + ++ A  L++ VG LG L+
Sbjct: 5   IHKKNIIAIVTAIAVYALVFMLVETGSLSRHYQSLLVPIGVNIILAVSLNLTVGFLGELT 64

Query: 68  LNCVIAYAIGAYSYVILGSR----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           L      ++GAY+  +          + + + + +  +++   G I+G+P+L+ +GDYLA
Sbjct: 65  LGHAGFMSVGAYAGCMFTIYANLPTYIELPIALIIGGLVAAVFGCIIGIPALRLKGDYLA 124

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           I TL   EI ++IL+  + +T G  G+   D+                            
Sbjct: 125 IVTLAFGEIIRSILMNIE-VTGGAGGLKGIDKSAN------------------------- 158

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           Y ++  +  ++  II  L  +    A  +IRDN  A  S+   +++ KL AF V++ F G
Sbjct: 159 YTLVFVIIVITVIIISNLVNSRAGRAICSIRDNIIAAESVGINVVYHKLLAFVVAAFFAG 218

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
            AG  +  +   + PD F F+++I ++ IV+LGGM S+     A  I+  + E+  G+  
Sbjct: 219 AAGVLYGHNLGILKPDTFDFNKSIEILVIVVLGGMGSIRGSIIAATIITVLPEVLRGLAD 278

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           Y                  +  + L +++++
Sbjct: 279 Y---------------RMLIYAVVLIVMMIL 294


>gi|167580888|ref|ZP_02373762.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis TXDOH]
          Length = 570

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/291 (12%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +     +        
Sbjct: 296 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPASFLAAAALGVV 355

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +                  +     S +         +
Sbjct: 356 LER--TVLRHLYGRPLETLLATFGVSLILIQATRTIFGAQNVQVVNPSWMSGGVTVMQNL 413

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 414 ILPYNRLAILAFALAVVGVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 473

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  ++        L  V + 
Sbjct: 474 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 531

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 532 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 569


>gi|111222262|ref|YP_713056.1| high-affinity branched-chain amino acid transport ATP-binding
           protein [Frankia alni ACN14a]
 gi|111149794|emb|CAJ61487.1| High-affinity branched-chain amino acid transport ATP-binding
           protein; putative membrane protein [Frankia alni ACN14a]
          Length = 982

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 56/319 (17%), Positives = 121/319 (37%), Gaps = 18/319 (5%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             +        ++  I  +    L +V G +G +SL  +       +        + +  
Sbjct: 366 YVANDSYRGALMETFIAGVLGLSLVVVTGYVGQVSLAQLTLAGAAGFLLSTFSHAWHIPF 425

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            +   ++A+ +   G++ GLP+L+ RG  +A+ TL ++   + +  +   +  G  G  +
Sbjct: 426 PISPILAALGATVIGVLAGLPALRIRGMLVAVVTLTLAVALEALWFRNNDLNGGTGGAPI 485

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
           A+   F               +           + L +    A  +  LRR+ + +A   
Sbjct: 486 ANPSIFGLDL--------GIGTGKAFPRPEFGLLCLAVLTAVAIGVAHLRRSRLGSAMLA 537

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +R ++++  +   +++  KL  FA++S   G+AG   A  +  ++   F     + V + 
Sbjct: 538 VRADERSAAAAGISVVRVKLLGFAIASFIAGLAGCLTAYKQTTVTFTSFSALLGLSVFTT 597

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           V L G+TS+S    A A+ IG            F   L         +  +  + L LV+
Sbjct: 598 VFLAGITSVSGGLLAGALGIG----------GVFYVFLSRTIDIGEWYGIVSGLGLILVV 647

Query: 333 LMRSHSLLRLRTPSNFLER 351
           +     ++     +    R
Sbjct: 648 IRNPDGIVGPAHLAAEKRR 666



 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 94/279 (33%), Gaps = 11/279 (3%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G+L+          AY+Y +L     L     +P +  +SG  G+   +         L
Sbjct: 57  SGVLNFGTGALSLHAAYTYALLRDGKILVPVPGLPETIGLSGPVGLWPAILITVLFEAAL 116

Query: 123 AI--ATLIMSEIFQNILIKWKPITNGKAGIY---VADRLYFLGTTVRSLIRFFRFPSSFV 177
            +    L+   +  ++ +     + G  G++   +  ++      V  ++    + +  V
Sbjct: 117 GVLLYVLVFRPLRAHLAVAKAVASLGLMGLFTGVITMQVGGDQILVAPILPRRTWEAGGV 176

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 ++ +  +  ++A +    R T    A R   + +        +     L+ +A+
Sbjct: 177 SLLSDRFWFVAVILLIAAVLAAVYRFTRFGTATRAAAETEIGALVSGLSPDLIALANWAI 236

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           S+A  G+AG   A     +          +  ++  +LG  T L+        +  +   
Sbjct: 237 SAAVAGIAGILIAPLVPLV--PGTYTLFIVPALAAAVLGRFTLLAPAVLGGIGIGALQ-- 292

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
                 Y  +    F  S       L+++   LVI  R 
Sbjct: 293 --SEAVYLQSRADWFPSSGVAELIPLVIVLAVLVIQGRP 329


>gi|182416035|ref|YP_001821101.1| urea ABC transporter, permease protein UrtB [Opitutus terrae
           PB90-1]
 gi|177843249|gb|ACB77501.1| urea ABC transporter, permease protein UrtB [Opitutus terrae
           PB90-1]
          Length = 551

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 109/320 (34%), Gaps = 28/320 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                I ++ A GL+I  G +G++++      A+GAY+  ++ + +G  + L     ++ 
Sbjct: 245 LSLGSILLVVALGLAITFGLMGVINMAHGEMIAVGAYTTYVVQNLFGAGLALSPFGWSIS 304

Query: 103 SGACGMIMGL-------PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
                                      A+  L+   + + +  +         G+ +  +
Sbjct: 305 LPGLNAQGWRYEGYFLLALPLSFLAAAAMGLLLERGVIRFLYRRPLESLLATWGVSLVLQ 364

Query: 156 LYFLGTTVRSLIRFFR-------FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
             F      + ++          +  + +I+     +V+     +   + L L RT++  
Sbjct: 365 QLFRRVFGSNNVQVSSPAFLSGNWTFNDIIFGWNRVFVIGFAGVIVLGVWLVLTRTSLGL 424

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
             R +  N+     L        ++ FA+ S   G+AGAF +   +         S  + 
Sbjct: 425 LIRAVMQNRAMAACLGVRTERVNMATFALGSGLAGLAGAFLSQIGNV--GPSLGQSYIVD 482

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
               V++GG+ +L+    A   +    +    +                +     ++IA+
Sbjct: 483 SFMTVVVGGVGNLAGTVLAALGIGMSDQTLQQL------------LLNPVLGKITVLIAI 530

Query: 329 FLVILMRSHSLLRLRTPSNF 348
            L +  R   +   R+ S  
Sbjct: 531 ILFLQWRPAGIFVTRSRSLE 550


>gi|110597478|ref|ZP_01385765.1| inner-membrane translocator [Chlorobium ferrooxidans DSM 13031]
 gi|110341022|gb|EAT59493.1| inner-membrane translocator [Chlorobium ferrooxidans DSM 13031]
          Length = 332

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 65/343 (18%), Positives = 132/343 (38%), Gaps = 28/343 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             ++A+       L L   +   YI  + I +L+    +   +I+ G  G  S      +
Sbjct: 4   ALIIALFAAFTALLPLFIGEENPYIIGIMISVLMMAALSSAWNIIGGFAGQFSFGHAAYF 63

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
             GAY+ +IL   + L+  +      +++    +I G      RG Y A+A++ ++EI +
Sbjct: 64  GAGAYTTLILIYSFELNPLIGAAAGMVVAALIALITGSIVFGLRGHYFALASIAVAEIIR 123

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             ++ ++  T G  GI +A+                      +  +   YY +L +  ++
Sbjct: 124 LSVLNFE-FTGGAQGILLAN---------------VTLWGLDLNSKTPFYYGMLLLLVVT 167

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++  +LR++      + IR++Q A  SL   +   K  A  +S+    +AG+ +A    
Sbjct: 168 LTVTEYLRKSKTGYYLQAIREDQDAASSLGINLALYKNRALLISALLTSVAGSLYALYIR 227

Query: 255 RISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC-----------GMN 302
            I          +I +I   I+GG+ +L        +L+ + E              G+ 
Sbjct: 228 FIDTSAVLDLRLSIEIILTAIIGGVGTLWGPVLGALLLVPLAEALRSNMIGDALVKLGLV 287

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
               +  +  + +    H  +  I   L IL     +L L   
Sbjct: 288 SETSSVGIFLNDNLAHAHVLVYGIITVLCILYLPKGILGLFRR 330


>gi|160881654|ref|YP_001560622.1| inner-membrane translocator [Clostridium phytofermentans ISDg]
 gi|160430320|gb|ABX43883.1| inner-membrane translocator [Clostridium phytofermentans ISDg]
          Length = 333

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 81/340 (23%), Positives = 148/340 (43%), Gaps = 47/340 (13%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGAT-KSQKYIDSMGIQILIYVMFAWGLSIV 59
           M     R N  + ++   A++   +   F+       + + S+  +I I ++ A  LSI 
Sbjct: 1   MEKNKKRRNLINAVIAFAAIILGYMAVYFMMEGNILSRQMTSLIPRIGINIILAVSLSIT 60

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSR-----YGLSIWLLIPVSAMISGACGMIMGLPS 114
           VG LG LSL      AIGAYS  I  ++       LS  + + +  +++   G+I G+P 
Sbjct: 61  VGLLGELSLGHAGFMAIGAYSSAIFTTQAVGLPGFLSFIIALLIGGIMAALFGVITGIPV 120

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
           L+ RGDYLAI TL  +EI ++I I    IT G  G+                        
Sbjct: 121 LRLRGDYLAIVTLAFTEIIRSI-INSMSITGGAMGLSKIP-------------------- 159

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                +   Y  +     L+  + + L+ +    A  ++R+N  A  ++   +   K+ A
Sbjct: 160 -----DYANYTWIYIFGILTILVAVNLKNSRHGRAILSVRENYVAAEAMGIPVTKFKILA 214

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F +++ F G+AGA +A +   + P+ F ++++I ++  V+LGGM ++     AT +L  +
Sbjct: 215 FTIAAFFAGIAGALYAHTYSVLRPNSFDYNKSIDILIFVVLGGMGNIPGTIVATILLTYL 274

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
            E       Y                     +AL +++++
Sbjct: 275 PEKFREFGDY---------------RMLTYALALIIIMIL 299


>gi|120613379|ref|YP_973057.1| inner-membrane translocator [Acidovorax citrulli AAC00-1]
 gi|120591843|gb|ABM35283.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 331

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 114/265 (43%), Gaps = 9/265 (3%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           S+  ++LIY + A G ++++G  GLLS    I + +G+Y+  +  +R+ L + + + ++ 
Sbjct: 28  SLASEVLIYGLAAMGCNLLLGHTGLLSFGQGIFFGLGSYTIALTLTRWPLPMPVALALAV 87

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +       ++G  +++ RG Y  + TL  +++F  +      +T G  G+    R     
Sbjct: 88  VAGAVGAALVGWVAIRQRGTYFVMLTLAFAQMFYFLAYSMPSLTGGDNGLMDIPRPS--- 144

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                 +    F    +      Y  +  +  ++  ++  +  +        +RDN++  
Sbjct: 145 ------LAVGGFTLWPLASPWQYYGFVAVVFLVAFWLLQQVSASVFGRTLLAVRDNEERA 198

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++   +   KL AF +S A  G+AGA  A           ++  + +++ + ++GG  +
Sbjct: 199 GAIGYDLKLLKLQAFVISGAVTGLAGALHAMMTGIAPLASAEYHTSEMILVMTVIGGTGT 258

Query: 281 LSKIAKATAILIGVVELCCGMNFYY 305
           L      +A  + V +    +   +
Sbjct: 259 LLASLLGSAFYLIVGDWLSTLWPRW 283


>gi|307947499|ref|ZP_07662832.1| high-affinity branched-chain amino acid transport system permease
           protein BraE [Roseibium sp. TrichSKD4]
 gi|307769317|gb|EFO28545.1| high-affinity branched-chain amino acid transport system permease
           protein BraE [Roseibium sp. TrichSKD4]
          Length = 324

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 69/270 (25%), Positives = 116/270 (42%), Gaps = 23/270 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------Y 88
            Y   MGI I IY + A GL++  G  GL +      +A+GAY+  IL S         +
Sbjct: 8   NYALFMGIFIGIYALLALGLNVQWGFAGLFNAGIAGFFAVGAYTSAILTSAAADGRIGGF 67

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            L        + + +GA    +G   L+FR DYLAIAT+ ++EI + ++   + +TN   
Sbjct: 68  DLPFIFGWVAAMIAAGAIAWPIGKICLRFRSDYLAIATIGVAEIIRLVIKSEETLTNSAR 127

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           GI    R +     V S                    +++ +  L   ++     +    
Sbjct: 128 GITGLPRPFGDLPYVESQ--------------AAYLAIVILVLALIYFLVQRQFNSPWGR 173

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE-NI 267
             R IRDN+ A  ++   I + +L AF   +A +G+AGA FA     I+P+         
Sbjct: 174 MMRAIRDNELAARAMGKDIEYRRLEAFIFGAAIMGLAGAMFAHFNRSITPEAIDPMVATF 233

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVEL 297
           +V  ++ILGG  +        A++  +  +
Sbjct: 234 LVWIMLILGGSGNNKGAILGAAVVWIIWSV 263


>gi|114764780|ref|ZP_01443963.1| branched amino acid ABC transporter (permease) [Pelagibaca
           bermudensis HTCC2601]
 gi|114542829|gb|EAU45851.1| branched amino acid ABC transporter (permease) [Roseovarius sp.
           HTCC2601]
          Length = 291

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 65/307 (21%), Positives = 130/307 (42%), Gaps = 21/307 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            YI ++   I IY + A  L+ ++G  G+ SL   + + +GAY+   +      SI L I
Sbjct: 3   AYIFNLVNLIAIYAILAVTLNFIMGYAGIYSLAHAVFFGLGAYTSAWVAQNVHPSILLTI 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P + M + A  +++ LP+L+ RG+Y   A+L +  +   I  +WK  T G  G+      
Sbjct: 63  PAAMMAAAALSLLLALPALRVRGEYFVAASLGLQVLAVTIFSEWKSFTGGIGGVLAIPPA 122

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G  V     F                + +    +  ++I  L  ++     R I D+
Sbjct: 123 NVFGIEVFKPAHF--------------AILSVVALVIVMALINALVHSSFGRNLRAIHDS 168

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  S    +   K  +  +S+A   +AGA +A+    I+ + F    +++V+++VI+G
Sbjct: 169 ESAAASFGKNVPMIKTISVVISAALAAVAGALYASYLSFINVESFTLDASVLVMAMVIIG 228

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  +++      A+L+ +  L    +                    +  + + L+++ R 
Sbjct: 229 GTGTVAGPIVGAALLMLLPSLISWFD-------FLPQTEIGALQQIIYGLGMTLLMIFRP 281

Query: 337 HSLLRLR 343
             ++  R
Sbjct: 282 GGIVGRR 288


>gi|83310576|ref|YP_420840.1| branched chain amino acid ABC transporter [Magnetospirillum
           magneticum AMB-1]
 gi|82945417|dbj|BAE50281.1| Branched-chain amino acid ABC-type transport system
           [Magnetospirillum magneticum AMB-1]
          Length = 618

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 51/322 (15%), Positives = 125/322 (38%), Gaps = 33/322 (10%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V +  L+ L         Y  S+  ++LI+ +FA  L  ++G+ G++S      + +G+Y
Sbjct: 314 VAFAGLVVLLALPMVGGSYGLSVASEVLIFALFAASLHFMMGTGGMVSFGHAAYFGLGSY 373

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              ++   +G+ +   +    +++ A  ++ G   ++  G YLA+ TL  ++I   ++ +
Sbjct: 374 GAALMVKYFGIPMLAALVTGPLLAAAAALVFGWFCVRLAGAYLAMLTLAFAQIAYAVVFQ 433

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W   T G  G+       +                      +  YY+ L +C      + 
Sbjct: 434 WSSFTGGDNGLIGIWPAPW------------------AANPVAFYYLTLALCGGGILAVR 475

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +         R  RD+     S+   +   + + FA++  F G+AG+ +A  +  + PD
Sbjct: 476 RITFAPFGYTLRACRDSALRADSIGINLSSHRWAGFALAGFFAGIAGSLYAFLKGSVFPD 535

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
               + ++  + +V+LGG+ +L+       +   +          +  +           
Sbjct: 536 TISIATSVDGLVMVLLGGVQTLTGPVVGALVYKTLHVTISSYTDQWRTA----------- 584

Query: 320 HTTLMVIALFLVILMRSHSLLR 341
               + + + ++++     +  
Sbjct: 585 ----LGVIIIVLVVAFPQGISG 602



 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 91/303 (30%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +         + A GLSI+ G   +++      Y +GAY    L  +           
Sbjct: 8   FLNGLASASSLFLVASGLSIIFGVSRIVNFAHGSFYMLGAYMAFTLVQKLSGGTVFGFWG 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++ A   ++G          +  A  ++       L+    +      + +      
Sbjct: 68  AIVLAAAAVALVGAVVEMVLLRRIYQAPELLQ------LLATFGLVLIVQDLVLVLWGPE 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                R+             +  + + +++    +   + L   RT      R    +++
Sbjct: 122 DLLGPRAPGLKGAIDIFGQSFPQYDFVLIILGPVVLGLLWLLFHRTRWGTLIRAATQDRE 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L     +   S F + +   G+ GA            +           IV++GG+
Sbjct: 182 MVAALGVNQAWLFTSVFTLGAFLAGLGGAVQLPR--EAVNHVMDLQIITEAFVIVVIGGL 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  I+  +      +              F      L  + + +++++R   
Sbjct: 240 GSVLGAFLAAVIIGELNAFGILI--------------FPQLTLVLTFLVMAVILVVRPWG 285

Query: 339 LLR 341
           LL 
Sbjct: 286 LLG 288


>gi|171318303|ref|ZP_02907463.1| urea ABC transporter, permease protein UrtB [Burkholderia ambifaria
           MEX-5]
 gi|171096505|gb|EDT41402.1| urea ABC transporter, permease protein UrtB [Burkholderia ambifaria
           MEX-5]
          Length = 539

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/291 (11%), Positives = 77/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +              +++              
Sbjct: 265 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRHAPAAFDWYPLVAVPVSFAAAALVGIV 324

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 325 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 382

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 383 ILPYNRLAILAFALAVVFVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 442

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          +  I     V+LGG+  ++        L  V + 
Sbjct: 443 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 500

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +   +  S  
Sbjct: 501 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAPKGRSAE 538


>gi|121583468|ref|YP_973899.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120596722|gb|ABM40157.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
          Length = 340

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 58/325 (17%), Positives = 124/325 (38%), Gaps = 18/325 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +   L+ L      S  Y   M  +++I  +FA  L ++ G  GL+SL     + +  
Sbjct: 17  LALMMGLVALAAFPFVSGDYYTEMVTRMMIMAIFAMSLDLLQGVTGLVSLGHAAYFGLAG 76

Query: 79  YSYVILG-SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           Y+   L      +++W  +P++ + SG   +I+G   ++ RG Y  + T+  +++   + 
Sbjct: 77  YALAFLTPESEPVNLWWSLPLAVLASGLAALIVGFFVVRTRGIYFIMVTMAFAQMIYFLF 136

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                +               L    + +   F +    +  ++ MYY  L +     + 
Sbjct: 137 HDNDSLGGSDG----------LYVNFKPIATLFGWTPFDLDSKVTMYYFTLVLVVAVYAF 186

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  +  +    A   IR N+    ++    +  KL+AF ++ A  G+AG         ++
Sbjct: 187 LRCVLWSPFGRALAGIRVNEHRMRAMGFGTVGYKLTAFTLAGALAGLAGYLTGVQSGYVN 246

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P++  F  +   I +VILGGM + +           ++ +   +                
Sbjct: 247 PELMGFHMSAHAIMMVILGGMGNFAGAIVGAFAFEYLLHVFKELPQVG-------SVDLG 299

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                 M I +  ++++    LL L
Sbjct: 300 KHWQLWMGIFIVGLVVLAPRGLLGL 324


>gi|298241069|ref|ZP_06964876.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963]
 gi|297554123|gb|EFH87987.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963]
          Length = 353

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 65/335 (19%), Positives = 129/335 (38%), Gaps = 33/335 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            +I   +     L+         S   + ++ +  LI+ +   G +I+ G  G ++L   
Sbjct: 1   MRIATFVGGGILLVFACAFPLLFSDPTVTTIAVFTLIFAVATSGWNILAGYTGYIALGHA 60

Query: 72  IAYAIGAYSYVILGSRYG----LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
             + +GAY+  IL   +        +LL+P++ +I+    + +G  +L+ R     + T+
Sbjct: 61  AYFGLGAYTLAILCQDWHIAGGYEPFLLVPLAGVIAALIAIPLGWIALRVRRHTFVVITI 120

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            M  I Q +      +T G  G+ +   L +                    + I  YYV 
Sbjct: 121 AMFFIIQLLAFNLSWLTKGSTGLSLPIPLDW----------------GGDFFNIPFYYVT 164

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +  L+ +I   +R +        IRD++     L      +KL AFA+++  +GMAGA
Sbjct: 165 LALLLLTLTISWGVRHSKYGLGLLAIRDDEDRALGLGVKTGISKLLAFALAALIVGMAGA 224

Query: 248 FFAASRDRISP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
            +A   + + P   F    +I +  +  LGG+ +++       IL    +          
Sbjct: 225 IWAYFVEAVYPATAFDPMFDIAIALMAFLGGLGTITGPLLGALILEPTQQYF-------- 276

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     N  +  +      +VIL+    ++ 
Sbjct: 277 ----ALAYGQNGYYLIVYGALFLVVILLLPQGIVP 307


>gi|302669706|ref|YP_003829666.1| branched-chain amino acid ABC transporter permease LivM
           [Butyrivibrio proteoclasticus B316]
 gi|302394179|gb|ADL33084.1| branched-chain amino acid ABC transporter permease protein LivM
           [Butyrivibrio proteoclasticus B316]
          Length = 350

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 65/337 (19%), Positives = 129/337 (38%), Gaps = 23/337 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
            +  + + I   + +   ++            ++  + + +  Y + A  L++ VG LG 
Sbjct: 4   TKKTRDNFITYGIVIASYIVFQTLASTGNLSSHMKGLLVPMTYYAVIAVALNLCVGILGE 63

Query: 66  LSLNCVIAYAIGAYSYVILGS------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           LS+       IGA++                   L   +   ++   G ++G+P L+ +G
Sbjct: 64  LSIGHCGFMCIGAFTSAFFSKVTEEGIPTVPRFILAFVIGIAMAALFGFLIGIPVLRLKG 123

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           DYLAI TL   EI +N++  +    + K   +       LG      +            
Sbjct: 124 DYLAIVTLAFGEIIKNVINAFYIGVDSKGVHFSLKNSMELGLEPDGQLIVNGAMGITGTP 183

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
               + V + +  L+  ++  L  +    A   +RDN  A  +    +   K+ AF +S+
Sbjct: 184 HNSSFTVGIVVLILALFVVQNLVNSRDGRAIMAVRDNYIAAEATGINVTKYKMMAFVISA 243

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSEN--IIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           A  G AG  F+ +   ++     F  N  I+++  V+LGG+ ++     A  IL  + EL
Sbjct: 244 AIAGAAGVLFSHNITTLTATSQYFGYNASIMILVYVVLGGIGNIRGSVIAACILYLLPEL 303

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
             G + Y                  +  I L ++++ 
Sbjct: 304 LRGFSNY---------------RMLIYSIVLIVMMIY 325


>gi|187930599|ref|YP_001901086.1| inner-membrane translocator [Ralstonia pickettii 12J]
 gi|187727489|gb|ACD28654.1| inner-membrane translocator [Ralstonia pickettii 12J]
          Length = 334

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 63/324 (19%), Positives = 131/324 (40%), Gaps = 16/324 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+Y LLL   + A     Y   +  ++L + +FA   ++++G  GLLS      +    Y
Sbjct: 16  VLYGLLLVALIAAPLVGAYPVFVA-KLLCFALFASAFNLLLGYTGLLSFGHAAFFGGAGY 74

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
               +     ++  L +          G+I+GL +++ +G Y A+ TL ++++     ++
Sbjct: 75  VAGYMMRDLHVTPELGLLAGTAAGAFIGLIVGLLAIRRQGIYFAMITLALAQMLYFFCLQ 134

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
             P T G+ G+    R                F    +  ++ +YYV+L +  L+  +I+
Sbjct: 135 -VPFTGGEDGLQGVPR-------------GKLFGVLDLSSDLTLYYVVLAIVVLAFLLIV 180

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
               +      + I++N+    SL       KL AF +S+A  G+AG+         +  
Sbjct: 181 RTIHSPFGQILKAIKENEPRATSLGYDTDRFKLLAFVLSAALTGLAGSLKTLVLGFETLT 240

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-FNM 318
              +S +  VI + ++GG+  LS      A++I +      +  +   +      +    
Sbjct: 241 DVHWSMSGSVILMTLVGGLGILSGPLLGAALVIALENKLGDIGSFLAGATGIDGFNILGE 300

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
             TT+      + +L     ++  
Sbjct: 301 SVTTVTGAIFVICVLTFRRGIMGE 324


>gi|302870043|ref|YP_003838680.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029]
 gi|302572902|gb|ADL49104.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029]
          Length = 369

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/321 (14%), Positives = 107/321 (33%), Gaps = 13/321 (4%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L        +      +    L++   A G  ++ G  G+LS    + +A G Y   IL 
Sbjct: 49  LPGIFEGPLNSPGTLQLLAICLVFGGLAAGYDLLFGRTGMLSFGHALYFAAGVYGTDILV 108

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           ++ GL +W    ++ +       ++G  +L+  G   A+ TL  +++   ++ +      
Sbjct: 109 TKAGLPLWQAAVLTVIGGTTLAALLGAVALRTVGIAFAMVTLAFAQVGAILVAR------ 162

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                     L      +   +         V   + +Y++ L    +   ++  +  + 
Sbjct: 163 ------DFGGLTGGEEGLPLDVSGLPSALVGVTNTVNLYWLALAYLAIVVLVVHRVSASP 216

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
                  +RD+++    L       KL AF ++       G  +       SP +     
Sbjct: 217 TGRVLAGLRDDERRIGVLGLDPYRFKLVAFTLAGGLASAGGVVYVLIVGGASPHITSSEL 276

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY-YFNSLLKFDCSFNMRHTTLM 324
            + ++ +V+LGG  +         + + +             NSL  F      +   ++
Sbjct: 277 TLSLLVMVVLGGPGTRWGPVLGGVLYMYLDHRLTAFGSSDAVNSLPAFLSHPLSQPLFVL 336

Query: 325 VIALFLVILMRSHSLLRLRTP 345
                L +      L  LR+ 
Sbjct: 337 GTVFILAVYFFPGGLASLRSR 357


>gi|146321403|ref|YP_001201114.1| branched-chain amino acid ABC transporter permease [Streptococcus
           suis 98HAH33]
 gi|223933324|ref|ZP_03625312.1| inner-membrane translocator [Streptococcus suis 89/1591]
 gi|253752243|ref|YP_003025384.1| branched-chain amino acid transport system permease protein
           [Streptococcus suis SC84]
 gi|253754069|ref|YP_003027210.1| branched-chain amino acid ABC transporter permease [Streptococcus
           suis P1/7]
 gi|253756003|ref|YP_003029143.1| branched-chain amino acid transport system permease protein
           [Streptococcus suis BM407]
 gi|330833173|ref|YP_004401998.1| branched-chain amino acid ABC transporter permease [Streptococcus
           suis ST3]
 gi|145692209|gb|ABP92714.1| ABC-type branched-chain amino acid transport system, permease
           component [Streptococcus suis 98HAH33]
 gi|223897974|gb|EEF64347.1| inner-membrane translocator [Streptococcus suis 89/1591]
 gi|251816532|emb|CAZ52168.1| branched-chain amino acid transport system permease protein
           [Streptococcus suis SC84]
 gi|251818467|emb|CAZ56296.1| branched-chain amino acid transport system permease protein
           [Streptococcus suis BM407]
 gi|251820315|emb|CAR46832.1| branched-chain amino acid transport system permease protein
           [Streptococcus suis P1/7]
 gi|319758632|gb|ADV70574.1| ABC-type branched-chain amino acid transport system, permease
           component [Streptococcus suis JS14]
 gi|329307396|gb|AEB81812.1| ABC-type branched-chain amino acid transport system, permease
           component [Streptococcus suis ST3]
          Length = 315

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 80/340 (23%), Positives = 142/340 (41%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + I   + +    L+   + A     Y   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNAIWLAILLAGFGLIQGLVSAGILNFYYIQIVQQIGIQIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVI--LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I            + + V  +ISGA  +++G+P+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYAVGILGKMMPTYGGFAIALIVGMLISGAVALLVGIPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++EI + ++I    +TNG AGI                                   ++
Sbjct: 126 GVAEIIRILIINGGSVTNGAAGIMSIPLFTSWP-------------------------LV 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++  + +   R+ +  A  ++R+++ A  S+     F K+SAF   +    +AG 
Sbjct: 161 YIFVIITTLVTVNFLRSPMGRATISVREDEIAAESVGVNPTFVKVSAFVFGAMTAAIAGG 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     I P  F F  ++ V+ I++LGG+ S++    A  +L  +             
Sbjct: 221 LHAGYVGTIVPKDFAFMTSVNVLIIIVLGGLGSITGTFVAAIVLGILNVFLKSY------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                    +     +  +AL L+++ R   LL  +  S 
Sbjct: 275 ---------SDISMIIYSLALILLMIFRPGGLLGTKEFSV 305


>gi|169830084|ref|YP_001700242.1| high-affinity branched-chain amino acid transport system permease
           [Lysinibacillus sphaericus C3-41]
 gi|168994572|gb|ACA42112.1| High-affinity branched-chain amino acid transport system permease
           protein [Lysinibacillus sphaericus C3-41]
          Length = 315

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 79/345 (22%), Positives = 141/345 (40%), Gaps = 42/345 (12%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++ +K      +LA+V   ++ L +       Y  +M I + I +M A  L IV+G  G 
Sbjct: 5   MKKSKVFWGYAVLALVIYAVVQLLIMTEVIDMYYKNMLITMCINIMLAVSLHIVIGVTGQ 64

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
            S+      A+GAY   I+ ++  L   + I + A+ +   G+I+G+P+L+ +GDYLAIA
Sbjct: 65  FSIGHAGFLAVGAYVSAIITTKLMLPFPMAILLGAVAAAVAGLIVGIPTLRLKGDYLAIA 124

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL  +EI + I +    +                                     +  + 
Sbjct: 125 TLGFAEIIRIIFLNTDYVGGAAGMQVKY---------------------------LSNWT 157

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
                  L+  +I     +    A  +IR+++ A  ++     + K+ AFA+ S F G+A
Sbjct: 158 YAFFGVVLTILVISNFTNSRHGRACISIREDEIAADAMGINTTYYKVVAFAIGSFFAGLA 217

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA FA +   I P  F F ++  ++  V+LGG+ SLS    A   L  V           
Sbjct: 218 GAIFAHNFYIIQPTTFGFLKSFDILIYVVLGGLGSLSGSVIAAVFLTIVSTYLANF---- 273

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                            +  + L +V+L R   L+  +  ++  +
Sbjct: 274 -----------PETRMIIYSLVLIIVMLYRPTGLMGTKEITDLFK 307


>gi|170741994|ref|YP_001770649.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168196268|gb|ACA18215.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 295

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 70/305 (22%), Positives = 118/305 (38%), Gaps = 17/305 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            YI ++ I   IYV+ A GL++  G  G+ +   V  + IGAY+  +L            
Sbjct: 3   AYIIAILIISGIYVLLALGLNLQYGLTGITNFGHVGFFCIGAYTAALLSQVSVPWP-FAF 61

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A ++      +GL SLK R DY AI +L  SE+ + ++   K +T G  GI    +L
Sbjct: 62  LAGAALAALAAWPLGLISLKLRDDYFAIVSLGFSEVVRIVVTSEKWLTKGVQGITGIPKL 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           +    T  +           V     +                 + R+        IRDN
Sbjct: 122 FAFLGTGTAQALAVLLLLVAVNMLAGLSKS-------------RIVRSPFGRMIEAIRDN 168

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++A  +L       K+    + +A  G+AG F+A     I P+ F       +   +I+G
Sbjct: 169 EEAVKALGKDPSTFKIQVLMLGAALAGIAGGFYAHYIGYIVPEQFIPLITFYIWMAIIIG 228

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+  +S     T IL+  +E    +  +        +         ++ +AL L  L R 
Sbjct: 229 GVGPISGALVGTLILMFFLEGSRFLRGFI---PFVSEVEMASIRLGVIGLALVLFTLYRP 285

Query: 337 HSLLR 341
             L+ 
Sbjct: 286 QGLMG 290


>gi|317121420|ref|YP_004101423.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Thermaerobacter marianensis DSM 12885]
 gi|315591400|gb|ADU50696.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Thermaerobacter marianensis DSM 12885]
          Length = 370

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 84/329 (25%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L A V  L+   F        Y   +G    ++ M    L+ ++G  G  +L     +A 
Sbjct: 18  LAAGVALLVALAFPALVGFNAYYLEIGFNFFLWAMLGLSLNFILGGTGQYNLGHAAFFAA 77

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  IL ++  + + +L+PV+A ++G   + +  P +  RGDYL I T+  +EI +  
Sbjct: 78  GAYTTAILNTKLDIPVLVLLPVAAAVAGLLAVAVARPIVHLRGDYLLIVTVGFAEIVRIT 137

Query: 137 L-IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           L      IT G  GI   DR   LG  +  ++ F+     F++                 
Sbjct: 138 LRNNVFGITGGSNGILGIDRPVILGLRLADMVHFYYLSLLFLLVT--------------V 183

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +I + L  + +  AW  IR+++ A  ++       KL AFAV  A  G AG  +AA    
Sbjct: 184 AIAVRLENSRVGRAWSYIREDEVAAAAMGIDTARYKLLAFAVGGALAGAAGNLYAAKMTV 243

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           I+P+ F F E++++ +IVILGG  S+  +   T  ++ + +L  G++ Y           
Sbjct: 244 IAPESFSFWESVVMFAIVILGGTGSIPGVFLGTFGMVVLPQLFRGLSDY----------- 292

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                  +   A+ ++++ R   L   R 
Sbjct: 293 ----RMLVFGAAMVVLMIFRPEGLWPSRR 317


>gi|296447075|ref|ZP_06889008.1| urea ABC transporter, permease protein UrtB [Methylosinus
           trichosporium OB3b]
 gi|296255420|gb|EFH02514.1| urea ABC transporter, permease protein UrtB [Methylosinus
           trichosporium OB3b]
          Length = 526

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 89/285 (31%), Gaps = 17/285 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           +  G +G++++       IGAY+  ++ + +   +         ++ A  +   + +L  
Sbjct: 253 VTYGLMGVINMAHGEMMMIGAYATYVVQNLFRAHLPDHFQYY--LAAAAPVAFVVAALVG 310

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         +        +     + +    F +  +
Sbjct: 311 VVIERLVIRFLYGRALETLLATWGVSLILMQTVRTIFGAQNVQVENPAWMSGRLFVTDNL 370

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                   ++L    +   +   L RT +    R +  N+     +          AFA+
Sbjct: 371 ELPYNRVVIILFSLAVLLLVSFLLARTRLGLFVRAVTQNRTMAKCVGVDSSRIDTIAFAL 430

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG   A S+             +    +V+LGG+  L+    A   L    ++
Sbjct: 431 GSGIAGLAGV--ALSQVGNVGPDLGQHYIVDSFMVVVLGGVGQLAGAVYAALGLGVAGKI 488

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              +       +              +++ L + I  R   L  L
Sbjct: 489 FENLVGAVLAEIG-------------LLVFLIVFIQKRPQGLFAL 520


>gi|113474035|ref|YP_720096.1| inner-membrane translocator [Trichodesmium erythraeum IMS101]
 gi|110165083|gb|ABG49623.1| inner-membrane translocator [Trichodesmium erythraeum IMS101]
          Length = 393

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 52/353 (14%), Positives = 104/353 (29%), Gaps = 28/353 (7%)

Query: 3   IFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
           I  L+      +     +V   ++F  +       +   +  + L   + A G+ ++ G 
Sbjct: 2   ILKLKSQHRKLLTQTGIIVVIAVIFAIIMPLALSGFRLKLLGRFLSLTIVALGIDLIWGY 61

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            GLLSL   I +A+G Y+  +          L    +        +              
Sbjct: 62  TGLLSLGHGIFFALGGYALAMHLKLQLPEGELPEFFTLYGVEKLPIFWQPFHSFPLTILA 121

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR-------------- 168
            I    ++      L+    I      I     L           +              
Sbjct: 122 IIIIPAVTAAILGYLVFKNRIKGVYFSIITQAALLVFFNFFNGQQKLINGTNGLKTDIEK 181

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
           FF   +     ++  Y V +    +   I  WL           IRD++           
Sbjct: 182 FFGILAGSEQAQLIFYEVTIISVIIIYLICRWLTSGRFGRLLIAIRDDETRVRFSGYNPT 241

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
             K+  FA+S A  G++GA +      ++P   + + +I ++  V +GG  +L     AT
Sbjct: 242 QFKVLVFAISGAIAGISGALYTVQSGIVTPSYMEVAFSIEMVIWVAVGGRGTLVGAIIAT 301

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            ++                        F         +   LV+ +  + ++ 
Sbjct: 302 LLVNFGRTFLSE--------------KFPEIWLFFQGVLFLLVVTILPNGIVG 340


>gi|319795284|ref|YP_004156924.1| urea ABC transporter permease urtb [Variovorax paradoxus EPS]
 gi|315597747|gb|ADU38813.1| urea ABC transporter, permease protein UrtB [Variovorax paradoxus
           EPS]
          Length = 515

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 90/291 (30%), Gaps = 16/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++   +       +    +++      +    +  
Sbjct: 240 ITYGLMGVINMAHGELMMIGAYATYVMQGIFQKYFPESMFGWYLVAAIPVSFLASALVGA 299

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
             +   I  L      + +L  W      +  +        +G      +       S V
Sbjct: 300 VLERGVIRFL-YGRPLETLLATWGISLMLQQLVRTLFGAQNVGVENPGWMSGGFTMLSNV 358

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                   +++    +  ++   + +T +    R +  N+     +          AFA+
Sbjct: 359 TLPWNRICIIVFAVLVLLAMGWLIGKTRLGLFVRGVTQNRPIASCMGVNTARIDTYAFAL 418

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG   A S+          S  +    +V++GG+  L+    A   L  + + 
Sbjct: 419 GSGIAGLAGC--ALSQIGNVGPDLGQSYIVDSFMVVVMGGVGQLAGTVYAALGLGILNKF 476

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             G                       +++ + + I  R   +  ++  S  
Sbjct: 477 IEGWAGAVLAK-------------IAVLVFIIIFIQKRPQGIFAMKGRSAE 514


>gi|297190788|ref|ZP_06908186.1| D-ribose ABC transporter permease [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|197722570|gb|EDY66478.1| D-ribose ABC transporter permease [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 655

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 50/313 (15%), Positives = 104/313 (33%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                VV  + + L  G   + + + ++G+Q  +  + A+G++ V+ S G + L+     
Sbjct: 31  ALTALVVLLVAMSLLSGDFLTTQNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVA 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A       +  G+ +WL + ++     ACG++ G      +         ++     
Sbjct: 90  ALSATVLAWTATSEGVPVWLAVILAVATGAACGLVNGALVSYGKLPPFIATLAML----- 144

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                            +   L  + +    +               ++   +L M  + 
Sbjct: 145 ----------------SIGRGLSLVISQGSPIAFPESVSGLGDTLGGWLPVPVLVMIAMG 188

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L RT I  +   I  N++A       +   KL  +A+S  F  +AG   A+   
Sbjct: 189 LLTALILGRTYIGRSMYAIGGNEEAARLSGLRVKRQKLVIYALSGLFAAVAGVVLASRLA 248

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P   +  E   + ++VI      GG+   S       IL  +      ++   F   
Sbjct: 249 SAQPQAAQGYELDAIAAVVIGGASLAGGVGKASGTLIGALILAVLRNGLNLLSVSAFWQQ 308

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 309 VVIGVVIALAVLL 321


>gi|89068973|ref|ZP_01156355.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
 gi|89045554|gb|EAR51618.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
          Length = 417

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 64/381 (16%), Positives = 134/381 (35%), Gaps = 54/381 (14%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           I+ ++ +  P++L  F   +   ++      +  + +I+ +FA G +I+ G  G LS   
Sbjct: 5   IVAVMTLFAPIILNPFPANSAMAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYLSFGH 64

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +G+YS V +    G +I   I +S +++G   +++G  SL+  G Y +I TL  +
Sbjct: 65  AAFLGVGSYSAVWMFKLLGFNIIPAILLSVVVAGLFSVVIGYISLRRSGIYFSILTLAFA 124

Query: 131 EIFQNILIK------WKPITNGKAGIYVADRLYF-------------------------- 158
           ++   +            +TNG+ G+ V                                
Sbjct: 125 QMSFALAYSVLGNPALINLTNGETGLQVYPSDPQVLHGASAPNVTNLFGLEMRQTCEVKL 184

Query: 159 ------LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                 L      ++      + +       YYV   +  +   + + + R+      R 
Sbjct: 185 GGTASGLSGCDTHMLPGAFGETFWAFDFNAGYYVCAVLMLIVFYLSIRIFRSPFGMMLRA 244

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           ++ NQ+             L+AF +S  + G+AG   A+       +  +++ +  V+ +
Sbjct: 245 VKSNQQRLNYTGLNPRPYTLAAFVISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLM 304

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMR 319
            ILGG  +L         +     +   +N    +S   F                    
Sbjct: 305 TILGGAGTLIGPVLGAGFIKYFENIFSKINDGVLHSWFAFMPEGLENLFVTLLHPFVGKG 364

Query: 320 HTTLMVIALFLVILMRSHSLL 340
               + I   LV++     L+
Sbjct: 365 WHLTLGILFMLVVIFLPGGLV 385


>gi|304405845|ref|ZP_07387503.1| urea ABC transporter, permease protein UrtC [Paenibacillus
           curdlanolyticus YK9]
 gi|304345088|gb|EFM10924.1| urea ABC transporter, permease protein UrtC [Paenibacillus
           curdlanolyticus YK9]
          Length = 363

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 99/333 (29%), Gaps = 27/333 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------- 84
                 +  ++  + L + + A GL ++ G  G+LSL   + + +G Y+  +        
Sbjct: 30  PLYLSDFRLNLLAKFLAFAIVALGLDLLWGYTGVLSLGHGVFFGLGGYAMAMYLKLEASG 89

Query: 85  ------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
                     GL+            G       L           +            ++
Sbjct: 90  GRMPDFMEWSGLTALPWFWKPFESFGFAFAAGILLPGLLALFLGYVTFRNRIRGVYFTIL 149

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +      +            V    R   +  +    +  +Y+        +  + 
Sbjct: 150 TQALVIITTTLLIGQQAYTGGTNGVTGYSRIMGYSIANPDTKQMLYWATAAFLVAAFVLC 209

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
            +L ++      R IRD +     +     F +++AFA+S A  G+AG  F      ISP
Sbjct: 210 RFLVKSRFGKVLRAIRDGENRVRFIGYNPAFYQMTAFAISGALAGLAGMLFVLHVGIISP 269

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            M     +I ++  V +GG  ++   A    ++                   +    +  
Sbjct: 270 SMMGIVPSIEMVLWVAIGGRGTMIGAAIGAVLMNW--------------GKSEISAQYPD 315

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                M     +V++   + +  L       +R
Sbjct: 316 AWLFFMGALFVIVVVFLPNGVAGLLGRIQIRKR 348


>gi|170736317|ref|YP_001777577.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
 gi|169818505|gb|ACA93087.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
          Length = 603

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 70/312 (22%), Positives = 125/312 (40%), Gaps = 33/312 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +  Y+        +Y + A  L++V G++G +SL       IGAY+  +L S  G 
Sbjct: 324 PWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGAYASALLSSDLGW 383

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S  + IP + +I+   G ++  P+ + RG Y++IATL + E+   +++ W  +T G  GI
Sbjct: 384 SPAVTIPCAGVITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVILNWDGLTRGPLGI 443

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                L +                         Y+    +  + A + + L R+ +    
Sbjct: 444 TGIAPLPW------------------ATTARAAYWFTFAVLVVFALVQVRLLRSHLGRTL 485

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +R++  A  +        K  AFAV     G++G   A     I+   F    +I+ +
Sbjct: 486 RAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINHQTFDSQVSILAL 545

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           ++VILGG+ ++         LIG+ EL      Y                  +  + L L
Sbjct: 546 TMVILGGLGNVLGGIVGAIALIGLPELFRWAADY---------------RMLIYGLVLLL 590

Query: 331 VILMRSHSLLRL 342
           ++  R   LL  
Sbjct: 591 LVRFRPQGLLGT 602



 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 107/305 (35%), Gaps = 25/305 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  I   IY + A GL+++ G   L++      Y +GA+   +  +R+GL + + +
Sbjct: 6   DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +  GA G+ +    L+       IA L+ +     IL +   +  G     V   L
Sbjct: 66  AAVVVGCGALGIAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             +          +       +A +  +LR T +  A R    +
Sbjct: 126 PDWHVR-----------IAGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +     + FA++ A  G++G       + I P M  F   +  +  +++G
Sbjct: 175 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++      + +L  V      +    +  L  F               L + ++ R 
Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280

Query: 337 HSLLR 341
           + L  
Sbjct: 281 NGLFS 285


>gi|328542660|ref|YP_004302769.1| amino acid ABC transporter permease [polymorphum gilvum
           SL003B-26A1]
 gi|326412406|gb|ADZ69469.1| Amino acid ABC transporter permease protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 344

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 57/341 (16%), Positives = 131/341 (38%), Gaps = 31/341 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +   +A++  L     L       Y+  + +  ++Y   A   +I+ G  G +SL   
Sbjct: 29  RVVAFPIALLVILAALPALQFFGGYNYLLHLVLYAMMYAAMASSWNILGGYTGYISLGHN 88

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           + + IG Y   ++ +  G++  +  PV+ +++ A G ++GL +L+ RG    I+++ +  
Sbjct: 89  VFFCIGGYFSGMVLAYSGVTSLITAPVAGLVAAAVGFLVGLITLRMRGPTFIISSIALLM 148

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           + + +   W  +                     + +   +        ++  YY +L + 
Sbjct: 149 VVRILFDNWHFVGGA------------------NGVTLPQLAIDVQWTKLPYYYAMLVVV 190

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+      ++ +      R I  ++    S        K+SAFA+S+ F+GMAGA +  
Sbjct: 191 SLTVYASYRIKHSKFGLGLRAISQDEVKAESAGINTRLYKVSAFALSAFFVGMAGAIWGE 250

Query: 252 SRDRISPDMFKFSENII-VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
               + P++F        ++ + ILGG  +++       +LI   E           ++L
Sbjct: 251 YITYLRPNIFLIVLIAANMVLMCILGGKGTVAGPVVGAVLLIAFNEFFVTYFGASELNIL 310

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                          + + + ++     ++     +  L R
Sbjct: 311 GT------------GVIMVIALMFFPAGIVGTLAKAGKLPR 339


>gi|254440692|ref|ZP_05054185.1| amino acid or sugar ABC transport system, permease protein,
           putative [Octadecabacter antarcticus 307]
 gi|198250770|gb|EDY75085.1| amino acid or sugar ABC transport system, permease protein,
           putative [Octadecabacter antarcticus 307]
          Length = 398

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 60/359 (16%), Positives = 126/359 (35%), Gaps = 30/359 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
             I+  L +  P +L  F   +   ++      +  + +I+ +FA G +++ G  G LS 
Sbjct: 12  MLIVFGLVIFAPFILNPFPEGSAMAQFNAGYPDLMQRFVIFGIFAVGFNLLFGLTGYLSF 71

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                  IG+Y+ +       L++   I ++ M++G   +++G  SL+  G Y +I TL 
Sbjct: 72  GHAAFLGIGSYAAIWSMKLVTLNVIPGILLAIMVAGVFALVVGYVSLRRSGIYFSILTLA 131

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS-------------- 174
            +++   +         G                  +     R                 
Sbjct: 132 FAQMMFAMAYSVLTPITGGETGLQIKNTDTPLFGGPADGSIGRANLFGLEMGNSIELAIG 191

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
            +V      +Y+      ++  + + + R+      R ++ NQ+       T     LSA
Sbjct: 192 GWVFTFNLGFYIAGFFLLIAFYLSIRIFRSPFGIMLRAVKSNQQRMNYTGLTPKRYTLSA 251

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F +S  + G+AG    A   ++ P+   ++ +  V+ + ILGG  +L        ++  +
Sbjct: 252 FVISGMYAGLAGGLMVAMDTQVGPERMFWTASGEVVIMTILGGAGTLLGPVLGAGMIKYM 311

Query: 295 VELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVIALFLVILMRSHSLL 340
             +   +N    +    F                        M I   LV++     L+
Sbjct: 312 ENIISKINKDILHEWFAFLPDGLEDVIVSMVYPFIGKGWHLTMGILFMLVVIFLPGGLV 370


>gi|325273634|ref|ZP_08139850.1| urea ABC transporter permease UrtC [Pseudomonas sp. TJI-51]
 gi|324101238|gb|EGB98868.1| urea ABC transporter permease UrtC [Pseudomonas sp. TJI-51]
          Length = 359

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 100/324 (30%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
           A +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  ALQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      + L  L      L           + +     
Sbjct: 103 DGLPGFMAFLSWTELPWYWAGTQHFAWALCLVVLAPGLLALVFGWFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  +       ++ + +G+   S  + 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRTILGFDITAQGTRAVLFLLTVGLLLASLYLC 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WRLTRSKFGRLLTAVRDAENRLMFCGYDPRGFKLLVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     LV L     ++ L
Sbjct: 329 FWLFFLGALFILVTLYLPKGVVGL 352


>gi|299066150|emb|CBJ37333.1| putative transmembrane abc transporter protein [Ralstonia
           solanacearum CMR15]
          Length = 341

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 59/320 (18%), Positives = 117/320 (36%), Gaps = 27/320 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
                   L       Y+   G Q+LI  +FA  L +V+G  G++SL     + +GAY+ 
Sbjct: 32  IAFWCAPVLVFFILPDYVV-FGSQVLIAGLFALSLDLVLGYAGIVSLGHAGFFGLGAYTA 90

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +L +         +  +A ++   G  +    ++ +     + TL +  +      K  
Sbjct: 91  GLLAAHGWGEPLSGLVAAAAVAALAGFCVSFLVVRGQDLTRLMVTLGIGLMLYEAANKMA 150

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G  G+        LG               F +     Y   L + F    ++  L
Sbjct: 151 FLTGGVDGLSGVTMDKLLGR------------FEFDLSGRTAYVYSLAVLFGVFVLLRRL 198

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R+    + R I+       +L   +    ++AF VS+A  G+AG   A +   +  D  
Sbjct: 199 VRSPFGLSLRGIQQGPGRMPALGANVRMRLVAAFTVSAAVAGVAGGLLAQTTQFVGLDAL 258

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            FS +  ++ +++LGG   L       A+ +   ++  G+N               +   
Sbjct: 259 GFSRSAELLIMLVLGGAGRLYGALVGAAVFMLAQDVLAGIN--------------PVYWQ 304

Query: 322 TLMVIALFLVILMRSHSLLR 341
             + + L +++L     +L 
Sbjct: 305 FWIGLLLMVIVLFARGGILG 324


>gi|299532790|ref|ZP_07046177.1| UrtA [Comamonas testosteroni S44]
 gi|298719014|gb|EFI59984.1| UrtA [Comamonas testosteroni S44]
          Length = 537

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 88/291 (30%), Gaps = 16/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++   +   +        ++       +    +  
Sbjct: 262 ITYGLMGVINMAHGELIMIGAYATYLVQVAFQRWLPEAWFGWYLVVAVPVAFLASALVGA 321

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
             +   I  L      + +L  +      +  +        +       +         +
Sbjct: 322 VLERGVIRFL-YGRPLETLLATFGISLVLQQTVRSLFGAQNVSVENPVWMSGGIALLPNL 380

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                   +++    + A +   + RT +    R +  N+     +          AFA+
Sbjct: 381 TLPYNRIAIIVFAFAVLAGVAFMIARTRLGLFVRGVTQNRAMASCVGVNTARTDTYAFAL 440

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG   A S+          +  +    +V+LGG+  L+    A   L  + +L
Sbjct: 441 GSGIAGLAGC--ALSQIGNVGPDLGQNYIVDSFLVVVLGGVGQLAGTVYAALGLGVLSKL 498

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             G                       +++ + + I  R   +  L+  S  
Sbjct: 499 LEGWTGAVLAK-------------IAVLLFIVVFIQKRPQGIFALKGRSAE 536


>gi|167837574|ref|ZP_02464457.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis MSMB43]
          Length = 472

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/291 (12%), Positives = 79/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +     +        
Sbjct: 198 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFVAAAALGVV 257

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 258 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVAVMQNL 315

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 316 ILPYNRLAILAFALAVVGIAWAALTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 375

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  ++        L  V + 
Sbjct: 376 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 433

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 434 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 471


>gi|167585723|ref|ZP_02378111.1| inner-membrane translocator [Burkholderia ubonensis Bu]
          Length = 316

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 99/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           I +  +   +Y + A G ++V G LG+++        IGA   +   +            
Sbjct: 8   ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPQLGNV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +   I+     ++G    +     L  A  +   I    +                
Sbjct: 68  ATLTIGLGIAAIVCAVVGYTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    ++     +   ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISMTEIVIIAVAFLVMGGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            ++      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L+       +L  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLAGAMVGGVVLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|167561873|ref|ZP_02354789.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia oklahomensis
           EO147]
 gi|167569094|ref|ZP_02361968.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia oklahomensis
           C6786]
          Length = 316

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 99/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           I +  +   +Y + A G ++V G LG+++        +GA   +   +            
Sbjct: 8   ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAITVLQNHFPGLGHV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +   I+      +G    +     L  A  +   I    +                
Sbjct: 68  ATLAIGLGIAAIVCACVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMMIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    +++    + A ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIKAGENNPGAVISMTEIAIIIVAFLVMAGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 AENPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|284991626|ref|YP_003410180.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160]
 gi|284064871|gb|ADB75809.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160]
          Length = 332

 Score = 92.2 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 64/318 (20%), Positives = 134/318 (42%), Gaps = 7/318 (2%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
            +G Q +   + A G+++  G  GLL+   +    +G Y   I  S++GL  W+ + V  
Sbjct: 15  GLGFQAVFLALLAIGINVQFGYAGLLNFGQIAFAMLGGYGIAISVSQWGLDFWVGVAVGI 74

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL--IKWKPITNGKAGIYVADRLYF 158
           + +    +++GLP+L+ R DYLAIAT+  +E  + +   +   P+TNG  G+   +  + 
Sbjct: 75  LAAVVLALLLGLPTLRLRADYLAIATIAAAEGLRLLFRSVSATPVTNGTRGLSGFNADFV 134

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +  R+    + +   E+++  V   +  LS  +I  L R+      ++IR+++ 
Sbjct: 135 ALAPWDTARRYGILGTQWSGAELWVTVVGWVLVALSCLLIWLLMRSPWGRVVKSIREDED 194

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL   +   K+ A  +      + G  +A      +PD ++ +   +  + +ILGG 
Sbjct: 195 AVRSLGKNVYVYKMQALVLGGVLGALGGMVYALGTASANPDQYQNANTFLAYAALILGGA 254

Query: 279 TSLSKIAKATAILIGVVELC-----CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
             +      + ++  +++         +        L            L+ + L L+++
Sbjct: 255 ARVLGPVVGSMLMFFIIQFADTGLRTLIGNGVIPEDLLSATDVAQLRFVLIGLGLMLLLV 314

Query: 334 MRSHSLLRLRTPSNFLER 351
            R   +   R       R
Sbjct: 315 FRPQGIFGDRREVMLDAR 332


>gi|222475839|ref|YP_002564360.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239]
 gi|222454210|gb|ACM58474.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239]
          Length = 332

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 66/323 (20%), Positives = 120/323 (37%), Gaps = 34/323 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A      +   L       Y   + +Q++I ++       + G  G+ S      Y IGA
Sbjct: 28  AAFVIAGVLGLLAPVLVGGYTLDLVMQLIILILVVTSWIFIAGYFGMFSFAHAALYGIGA 87

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+ V+L    G+   + + +  +++G   + + LP L+  G Y+ + TL  +EI   ++I
Sbjct: 88  YAAVLLAGEMGIHPIIAVLLGGVVAGILSIPIALPVLRLSGAYVGMVTLAFAEIVYRLVI 147

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            ++ +T G  G                      FPS F    I +YY +  +      + 
Sbjct: 148 VFREVTGGPTGYT-------------------GFPSLFGGNRIALYYFVFALVAALLVVQ 188

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L         R IR+   A   L   +   KL+ F + SA  G+AG   A +   ISP
Sbjct: 189 YGLLVNRFGLVARAIREAPDAARMLGNNVPRYKLTGFIIGSAIAGVAGGLQAHTVLIISP 248

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            M + +  I  +++ I+GG+ ++        I+ G+ E    +                 
Sbjct: 249 PMIEVNRMIEFMAMGIIGGLRTIGGGIFGAVIVFGLSEGLRDLGE--------------- 293

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
               +    L +V +     L  
Sbjct: 294 VRLVIWGALLVVVTIYFPDGLAG 316


>gi|332528480|ref|ZP_08404468.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
 gi|332041991|gb|EGI78329.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
          Length = 328

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 77/324 (23%), Positives = 131/324 (40%), Gaps = 30/324 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +AV     L L +     + Y   +    LI+++   GL++ VG  G  SL     + IG
Sbjct: 6   IAVALIAALGLLIAPQFLKSYGVYLLTYWLIFIIAIMGLNLTVGYAGQKSLGHAAFFGIG 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL        W  +P +A+I    G+I+G P+L+ +  YLA ATL  +     ++
Sbjct: 66  AYASAILMKAGVS-FWFSLPAAALICFGVGLILGFPALRVQTIYLAFATLGFNTAVWLVM 124

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
              + +T G  GI    R   L  ++ +                + +Y  L +  L A +
Sbjct: 125 RNEEWLTGGTFGINNIPRPELLVWSLENNR--------------YYFYFTLAVTLLLAWL 170

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L R+    A+  +RDN     SL   I    L +FA+ +AF G+AG  FA+    I 
Sbjct: 171 QWRLLRSPWGKAFMALRDNPIRAESLGVHIRNYTLLSFAIGAAFAGVAGVLFASLVQFIE 230

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F    +I++  +V++GG           A+ + + E                     
Sbjct: 231 PAPFTVGASIMMYLMVVVGGPGYFLGPVVGAAVGVLLPEWLRF---------------AQ 275

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
             +  +   A+ L+++     LL 
Sbjct: 276 AWYLFIFGAAVVLMMIWLPDGLLS 299


>gi|326319514|ref|YP_004237186.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323376350|gb|ADX48619.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 331

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 117/278 (42%), Gaps = 9/278 (3%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           S+  ++LIY + A G ++++G  GLLS    I + +G+Y+  +  +R+ L + L + ++ 
Sbjct: 28  SLASEVLIYGLAAMGCNLLLGHTGLLSFGQGIFFGLGSYTIALTLTRWPLPMPLALALAV 87

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +       ++G  +++ RG Y  + TL  +++F  +      +T G  G+    R     
Sbjct: 88  VAGAVGAALVGWVAIRQRGTYFVMLTLAFAQMFYFLAYSMPGLTGGDNGLMDIPRPS--- 144

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                 +    F    +      Y  +  +  ++  ++  +  +        +RDN++  
Sbjct: 145 ------LAVGGFTLWPLASPWQYYGFVAVVFLVAFWLLQKVSASVFGRTLLAVRDNEERA 198

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++   +   KL AF +S A  G+AGA  A           ++  + +++ + ++GG  +
Sbjct: 199 GAIGYDLKLLKLQAFVISGAVTGLAGALHAMMTGIAPLANAEYHTSEMILVMTVIGGTGN 258

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           L      +A  + V +    +   +   L       ++
Sbjct: 259 LLASLLGSAFYLIVGDWLSTLWPRWLLLLGVVLMVISL 296


>gi|83746540|ref|ZP_00943591.1| LivM [Ralstonia solanacearum UW551]
 gi|207743852|ref|YP_002260244.1| transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83726871|gb|EAP73998.1| LivM [Ralstonia solanacearum UW551]
 gi|206595252|emb|CAQ62179.1| transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 341

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 60/320 (18%), Positives = 116/320 (36%), Gaps = 27/320 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
                   L       Y+   G Q+LI  +FA  L +V+G  G++SL     + +GAY+ 
Sbjct: 32  IAFWCVPVLVFFVLPDYLV-FGSQVLIAGLFALSLDLVLGYAGIVSLGHAGFFGLGAYTA 90

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +L +         +  +A ++   G  +    ++ +     + TL +  +      K  
Sbjct: 91  GLLAAHGWGEPLSGLAAAAAVAALAGCCVSFLVVRGQDLTRLMVTLGIGLMLYEAANKMA 150

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G  G+        LG               F +     Y   L + F    ++  L
Sbjct: 151 FLTGGIDGLSGVTMETLLGR------------FEFDLSGRTAYVYSLAVLFCLFVLLRRL 198

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R+    + R I+       +L   +    + AF VS+A  G+AG   A +   +  D  
Sbjct: 199 VRSPFGLSLRGIQQGPARMPALGADVRMRLVVAFTVSAAVAGVAGGLLAQTTQFVGLDAL 258

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            FS +  ++ +++LGG   L       A+ +   ++  G+N               +   
Sbjct: 259 GFSRSAELLIMLVLGGAGRLYGALVGAAVFMLAQDVLAGIN--------------PVYWQ 304

Query: 322 TLMVIALFLVILMRSHSLLR 341
             + + L +V+L     +L 
Sbjct: 305 FWIGLLLMVVVLFARGGILG 324


>gi|11498430|ref|NP_069658.1| branched-chain amino acid ABC transporter, permease protein
           (braE-2) [Archaeoglobus fulgidus DSM 4304]
 gi|2649777|gb|AAB90411.1| branched-chain amino acid ABC transporter, permease protein
           (braE-2) [Archaeoglobus fulgidus DSM 4304]
          Length = 323

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 67/319 (21%), Positives = 128/319 (40%), Gaps = 26/319 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            +L+   L       Y   +    +IY + A GL+I++G  G  SL     Y +GAY   
Sbjct: 9   VILILAVLLPLTGSSYALRISTLFIIYTIAAMGLNIIIGYTGQASLAQGAFYGLGAYVSA 68

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +L        W  + V+         ++GL +L+ +G Y AIATL+ + I   ++ KW  
Sbjct: 69  LLVLNGWS-FWASVIVAIAFVAFVAFLIGLMTLRLKGAYFAIATLLFNVIIYEVVDKWDE 127

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G++         + +                    YY++L +  +   +   + 
Sbjct: 128 VTRGPRGLFGIPSPSIELSGIS----------ISFSGTYNFYYLMLAVLIVMTLLYWLII 177

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R++  +    IR+N+         +   K+++F +S+ F  +AGAF++A    I PD+  
Sbjct: 178 RSSFGSIIVAIRENELLAEYAGVNLTKFKVASFVLSAIFAAVAGAFYSAYIGSIFPDITS 237

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  +   ++ +I GG  ++      TA++  + E+   +  Y                  
Sbjct: 238 FVNSFAFLTAIIFGGAGTMLGPFIGTAVVTLINEVFFTLAQYTV---------------L 282

Query: 323 LMVIALFLVILMRSHSLLR 341
           +  I   L IL     ++ 
Sbjct: 283 VQGIVFLLAILFMPKGVMG 301


>gi|163739271|ref|ZP_02146682.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis BS107]
 gi|161387341|gb|EDQ11699.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis BS107]
          Length = 356

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 122/324 (37%), Gaps = 9/324 (2%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
            F               +I I+++      +++G  G++S    + + +GAY   +  + 
Sbjct: 28  AFAPFLFPGVRTVDTAARICIFIVLVASYDLLLGYGGIVSFAHTMFFGMGAYGVALTSTH 87

Query: 88  YGLSI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            G       +     A ++    +++GL SL+ R  + A+ TL ++     ++ +   +T
Sbjct: 88  MGRGFDALAIGAISGAALAAVLALLIGLFSLRVRAIFFAMITLAVASAVAVLVSQLSGLT 147

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF-VIYEIFMYYVLLGMCFLSASIILWLRR 203
            G+ G+                  F        +  ++  YY++ G   L    +L +  
Sbjct: 148 GGEDGLTFKTPRELGPAFKFGKETFDGTLFGVKLNGKLLTYYLIFGGSALLFLALLRVVN 207

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF-K 262
           +      + IR+N     ++   +++ +++A  +S+A   ++G+ +A     + PD    
Sbjct: 208 SPFGRVLQAIRENDFRAEAIGYRVVYYRVTATCLSAAIAALSGSLYAIWLRYVGPDTTLS 267

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYYFNSLLKFDCSFNM 318
            +  I ++ +V++GGM ++        + +     +  L   ++       L  +     
Sbjct: 268 MTIMIDILLMVVIGGMGTIYGAVIGATLFVLAQNYLQNLMGVLSSMTEGLPLLPELLSPD 327

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
           R    + +   L +      ++  
Sbjct: 328 RWLLWLGVLFILSVYFFPSGVVGR 351


>gi|297562097|ref|YP_003681071.1| inner-membrane translocator [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846545|gb|ADH68565.1| inner-membrane translocator [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 329

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 60/299 (20%), Positives = 117/299 (39%), Gaps = 5/299 (1%)

Query: 55  GLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
           GL++  G  GLL+   V    +GAY   I  + + L + +   V  + +    +++G+P+
Sbjct: 28  GLNLHFGYTGLLNFGQVGFMLVGAYGVGISVAVFDLPLVVGFGVGLLCAFVMALLLGIPT 87

Query: 115 LKFRGDYLAIATLIMSEIFQNILI--KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
           L+ R DYL+I T+  +E+ + +      +P+T G  G+      +          R+   
Sbjct: 88  LRLRADYLSITTIAAAEVIRLVYRAGFAEPLTGGVYGLQNLASDFRAINPFDGGERYGFG 147

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
             S+    +++  V  G+  L A +   L  +      + IR+++ A  SL   +   K+
Sbjct: 148 ALSYNGNHLWVLVVTWGLVLLMAGLTWVLMHSPWGRVIKGIREDEDAVRSLGKNVFAYKM 207

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
            A  +      +AG   A  +  I PD FK      +  I++LGG   +        +  
Sbjct: 208 QALVLGGLVGALAGCMLAVYQASIQPDQFKPQVTFFLWVILLLGGAGRVFGPVLGAMVFW 267

Query: 293 GVVELCCGM---NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
            ++    G+                 +       + + L L+I+ R   L+  R     
Sbjct: 268 FLMNFTDGVLQGFGSMGWLPFLDGPDYGAIQLAFVGLLLVLLIVFRPQGLIGDRKEMLI 326


>gi|320335596|ref|YP_004172307.1| ABC transporter integral membrane subunit [Deinococcus maricopensis
           DSM 21211]
 gi|319756885|gb|ADV68642.1| ABC-type transporter, integral membrane subunit [Deinococcus
           maricopensis DSM 21211]
          Length = 319

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 104/265 (39%), Gaps = 15/265 (5%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           + I IL + +FA    ++ G  GLLS      + + AY+   L         + +     
Sbjct: 41  LAIDILAWGLFAVAFDLLFGFSGLLSFGHAAFWGVSAYASAYLLGHGQGVP-VALLGGTA 99

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +    + +G  S++  G Y ++ TL  +++   + ++W  +T G+ G+    R   LG 
Sbjct: 100 AALLLAVPVGFLSVRSLGIYFSMITLAFAQMLSFLALQWTDVTGGENGLQGLTRPNLLGL 159

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
              +               +  YY  L +      +     R+      + +RDN     
Sbjct: 160 DFTN--------------GVTRYYFALAVFAAGFYVAYRTVRSPFGKTLQAVRDNATRAQ 205

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           S+       KL AF +S+A  G+AG  +      +S D+  +  +  V+ + +LGG  +L
Sbjct: 206 SIGYNPTRFKLMAFLISAALSGLAGTLYTFGHGVVSLDVVSWRTSGEVVMMTLLGGTGTL 265

Query: 282 SKIAKATAILIGVVELCCGMNFYYF 306
                  A+++ + ++    N    
Sbjct: 266 FGPVVGAALVLLLRDVLTEANIPVG 290


>gi|161525652|ref|YP_001580664.1| urea ABC transporter permease UrtB [Burkholderia multivorans ATCC
           17616]
 gi|189349622|ref|YP_001945250.1| branched-chain amino acid transporter permease [Burkholderia
           multivorans ATCC 17616]
 gi|160343081|gb|ABX16167.1| urea ABC transporter, permease protein UrtB [Burkholderia
           multivorans ATCC 17616]
 gi|189333644|dbj|BAG42714.1| branched-chain amino acid transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 540

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/291 (11%), Positives = 79/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        +++              
Sbjct: 266 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRHVPAAFDWYPLVAVPASFATAALVGIV 325

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 326 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 383

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 384 ILPYNRLAILAFALAVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 443

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          +  I     V+LGG+  ++     +  L  V + 
Sbjct: 444 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGSFGLGLVGKA 501

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +   +  S  
Sbjct: 502 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAAKGRSAE 539


>gi|119385780|ref|YP_916835.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119376375|gb|ABL71139.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 338

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 66/326 (20%), Positives = 129/326 (39%), Gaps = 17/326 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           LL       + LF       +Y  +      I+       ++V G  G+ SL  V  +AI
Sbjct: 8   LLLCGLFACVALFWPMISGMRYSITQTTFFFIWATVVVQWNLVFGIGGIFSLAQVAIFAI 67

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY   +LG   G S+ L +P  A+++    +I+G+  L+  G Y+A+ T+ +S++   +
Sbjct: 68  GAYVTAMLGYYLGTSMLLAMPAGAVVAVVASIILGIACLRLYGPYVALLTICVSQVLYVL 127

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           ++                 L                      + +  YYV L +   +  
Sbjct: 128 IVNDTDCF--TNPPAGCMPLMGGVRGFSRFGDLGFRDWLGAGFYVGNYYVGLLLLSAAIL 185

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
             + +  + +  A+R +RDN     +        +L  F +S+ F G+AGAF+A +   +
Sbjct: 186 FSIMIIHSPMGLAFRALRDNPVYAAARGVDRFRYQLWIFGLSAFFTGLAGAFYAVNTGVV 245

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
            P +F F   + ++S++I+GG+ ++       A+L+   E    +  +            
Sbjct: 246 GPVVFSFQHLLFLLSMIIVGGIGTVWGPVIGAAVLMLADEAMRELGDF------------ 293

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
                  M + L   +++    L  L
Sbjct: 294 ---RDIGMGLILVACVVLMPRGLTGL 316


>gi|55820454|ref|YP_138896.1| branched-chain amino acid ABC uptake transporter membrane-spanning
           protein [Streptococcus thermophilus LMG 18311]
 gi|55822338|ref|YP_140779.1| branched-chain amino acid ABC transporter permease [Streptococcus
           thermophilus CNRZ1066]
 gi|116627276|ref|YP_819895.1| ABC transporter permease [Streptococcus thermophilus LMD-9]
 gi|55736439|gb|AAV60081.1| branched-chain amino acid ABC uptake transporter membrane-spanning
           protein [Streptococcus thermophilus LMG 18311]
 gi|55738323|gb|AAV61964.1| branched-chain amino acid ABC transporter permease protein
           [Streptococcus thermophilus CNRZ1066]
 gi|116100553|gb|ABJ65699.1| Uncharacterized ABC-type transport system, permease component
           [Streptococcus thermophilus LMD-9]
 gi|312277764|gb|ADQ62421.1| Uncharacterized ABC-type transport system, permease component
           [Streptococcus thermophilus ND03]
          Length = 316

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 76/337 (22%), Positives = 137/337 (40%), Gaps = 42/337 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + I   L +   L+L     +     Y   + + I I ++   G ++V+G  G  +L 
Sbjct: 6   KVNLIWFGLIIGLFLILKGLELSGIMNLYYIQILMGIGISILMGLGTNLVLGFSGQFTLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAYS  I+          +L + V  +I+    +I G+P+L+ +GDYLAIATL
Sbjct: 66  QAGFMAIGAYSSAIITGMMPTYDGFYLSMVVGVIIAAVVALIFGIPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            M+EI + I++    +TNG AG+                                   V+
Sbjct: 126 GMAEIIRIIIVNGGELTNGAAGLTGILPYTSWP-------------------------VI 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                +   ++L   R+A      TIR+++ A  S+   +   K+  F + +    +AG+
Sbjct: 161 YFFVVIITILVLNFLRSATGRQAITIREDEIAAESMGVNVTKLKVIIFVIGAMISAIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            + +    + P  F   ++I  + I +LGG+ S++    A  +L  +      +      
Sbjct: 221 LYVSYIGTVVPKDFAIMKSIDYLIIAVLGGLGSITGTIIAAVVLGIINMFLQNV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                    +     +  +AL LV+L R   LL  + 
Sbjct: 275 ---------SNLRMIIYALALILVMLFRPGGLLGTKE 302


>gi|322368700|ref|ZP_08043267.1| ABC-type branched-chain amino acid transport system, permease
           protein II [Haladaptatus paucihalophilus DX253]
 gi|320551431|gb|EFW93078.1| ABC-type branched-chain amino acid transport system, permease
           protein II [Haladaptatus paucihalophilus DX253]
          Length = 437

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 71/399 (17%), Positives = 136/399 (34%), Gaps = 61/399 (15%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDS----MGIQILIYVMFAWGLSIVVGSL 63
           +N    IL +L  +Y L L        S +   +    +   I +Y M A  L++  G  
Sbjct: 10  INDTMLILGVLLAIYVLYLLAGSALGYSLRGQLNSLARLTFLIGVYGMLALALNLHWGYT 69

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGL-------------SIWLLIPVSAMISGACGMIM 110
           GL ++      A+G Y+  I+                    +W+ I    + +   G+++
Sbjct: 70  GLFNIGIAGFMAVGLYTMAIVSKPPASATAGAATVSGLGLPLWVGILAGMLAAAILGLLV 129

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIK------------------WKPITNGKAGIYV 152
            LP+L+ R DYLAI T+  SEI + I++                      + N +  +  
Sbjct: 130 ALPALRLRADYLAIVTIATSEIIRFIVMSDQFQTFTLFGKTLGTGGGRGLLLNFEDPLQP 189

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                  G    +L          V+  +    +L+G       ++     +      + 
Sbjct: 190 LFDSAPYGALDDALNPLVGGSIGPVLNSLTYAVILMGFVAAFYWLMKRTGESPFGRVLKA 249

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           IR++++   SL       K+ +F +  A +G+AG  +   +  I+P  FK      V   
Sbjct: 250 IREDEEVANSLGKNTDVFKIKSFMLGCALMGLAGILWQMRQGAITPTSFKPQVTFFVWLA 309

Query: 273 VILGGMTSLSKIAKATAILIGVV--------------------------ELCCGMNFYYF 306
           +I+GG  S +      A+  G++                           +    N +  
Sbjct: 310 LIIGGAGSNTGSVLGAAVFAGLLYQGPLYLKNIIRQVYNVSGAPNTFADAVGPLFNGHIT 369

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
             +     + N     +M   L  ++  R   +L  R  
Sbjct: 370 PMVAYIINNINALQLVIMGAVLIWIMQHRPEGVLGHRKE 408


>gi|83719214|ref|YP_442049.1| branched-chain amino acid ABC transporter permease [Burkholderia
           thailandensis E264]
 gi|83653039|gb|ABC37102.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis E264]
          Length = 542

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/291 (12%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +     +        
Sbjct: 268 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPASFLAAAALGVV 327

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +                  +     S +         +
Sbjct: 328 LER--TVLRHLYGRPLETLLATFGVSLILIQATRTIFGAQNVQVVNPSWMSGGVTVMQNL 385

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 386 ILPYNRLAILAFALAVVGVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 445

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  ++        L  V + 
Sbjct: 446 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 503

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 504 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 541


>gi|291300338|ref|YP_003511616.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728]
 gi|290569558|gb|ADD42523.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728]
          Length = 337

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 57/321 (17%), Positives = 114/321 (35%), Gaps = 27/321 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             ++  L         Y    G ++L   + A  ++++ G+ GL SL     Y IGAY  
Sbjct: 26  LAVVAVLACVPFIVDDYTLITGNRVLSLGLLAASVALLTGTAGLPSLGQAAPYGIGAYLA 85

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
             L         L +  +A        + G   ++ RG    + TL + EI      KW+
Sbjct: 86  YNLAELDWTFAPLQVVAAAAAGALFNAVTGPVVVRTRGVVFLMVTLAVGEIAVVAAGKWE 145

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +TNG  G                       P   ++ +  +Y+  LG+  +  + ++ +
Sbjct: 146 SVTNGTDGTGRIPP-------------GELIPGEPLVDDANLYWYALGVAVVVITAMVLV 192

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
           +R+         RDN+    +    +    L  +  + A  G+ G+  A ++  +SP   
Sbjct: 193 QRSRGGKLLHGSRDNEMRMRASGHRVSGYLLLTYIAAGAIAGVGGSVLATTQRYVSPSDM 252

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            FS   +++  V++GG  S++       ++I   +L                        
Sbjct: 253 DFSVAALILLAVVIGGAFSITGALAGVLLVIVARDLIGNHLPGQGP-------------- 298

Query: 322 TLMVIALFLVILMRSHSLLRL 342
            L+ I   + + +  + L   
Sbjct: 299 LLLGILFIVAVYLLPNGLAGR 319


>gi|326790025|ref|YP_004307846.1| ABC transporter transmembrane protein [Clostridium lentocellum DSM
           5427]
 gi|326540789|gb|ADZ82648.1| ABC-type transporter, integral membrane subunit [Clostridium
           lentocellum DSM 5427]
          Length = 291

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 99/303 (32%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G   +L+        +GAY+  ++ +   L   + +  
Sbjct: 7   LINGLNLGSIYALIALGYTMVYGIAKMLNFAHGDVIMVGAYTLSLIMTSLNLPPTVAVIA 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++    G+ +   + K       +  LI +      L     +  G            
Sbjct: 67  SVVVCSVLGVTIEKIAYKPLRKASPLTVLITAIGVSYFLQSVALLLFGSK---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V S+I       + +         L     +   + L++ +T I  A   + +++ 
Sbjct: 117 -QRKVNSVITIQPIQIAGIELTGESIVTLGVTLIIMIGLTLFINKTKIGKAMLAVSEDKG 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA   +AG  + +S   + P        I      +LGG+
Sbjct: 176 AAQLMGINVNRTISITFAIGSALAAVAGVLYVSSYGFVGPYT-GSLPGIKAFVAAVLGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L  +  L            + F               L +V+L++   
Sbjct: 235 GSVPGAMLGGILLGIIESLSKAYISTNLADAIVFS-------------VLIIVLLVKPAG 281

Query: 339 LLR 341
           LL 
Sbjct: 282 LLG 284


>gi|254486933|ref|ZP_05100138.1| inner-membrane translocator [Roseobacter sp. GAI101]
 gi|214043802|gb|EEB84440.1| inner-membrane translocator [Roseobacter sp. GAI101]
          Length = 327

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 51/291 (17%), Positives = 106/291 (36%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +   L +         + ++ ++  +  I  +   GL+I +G  GL+S      +
Sbjct: 6   LLNIVLFALLPVTALAAFMLDEPFVITLVTKAAILALAGVGLNIALGLGGLVSFGHAAFF 65

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G Y+  +L S       ++     +      +++   ++   G        +      
Sbjct: 66  GLGGYAMGVLASHAQSYTPIMESPFLIEGTKSMLVIWGVAIVTGGLAALAIGALSLRTTG 125

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              I            +      + G    S+     FP    +  I  + +  G+  + 
Sbjct: 126 VYFIMITLAFGQMLYYFAISWPAYGGEDGLSIYIRNEFPGLNTLDPIQFFAIAFGVLAIV 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I   L ++    A    R N +   ++  T    +L AF +S A   +AGA FA    
Sbjct: 186 LFIASRLAKSPFGLALSAARQNAERVETVGITPFRLRLVAFVISGAITALAGALFADLNR 245

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
            +SP MF +  +  ++  VILGG+  L       A+ I +  +  G++ ++
Sbjct: 246 FVSPTMFSWHTSGEIMVFVILGGVGRLFGPVAGAALYILLEHVLGGLSDFW 296


>gi|161525653|ref|YP_001580665.1| urea ABC transporter permease UrtC [Burkholderia multivorans ATCC
           17616]
 gi|160343082|gb|ABX16168.1| urea ABC transporter, permease protein UrtC [Burkholderia
           multivorans ATCC 17616]
          Length = 406

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/350 (12%), Positives = 99/350 (28%), Gaps = 32/350 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 63  LAVGIGVPLAALVAPESSAFHLSAYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 122

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                          +++ +   
Sbjct: 123 FALGGYAIGMYLMREIGRDGQYGSDLPDFMVFLDWHQLPWYWAGTQHLAWALLLVVIVPA 182

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +   A     +     +I            Y  +  +          R   FP +
Sbjct: 183 VLAWVFGFFAFRSRVKGVYLSIITQALTFAAMLLFYRNETGFGGNNGFTDFKRIAGFPIT 242

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +  +      L+      +  + +      +RD +     L  + +  KL  +
Sbjct: 243 SPGTRTVLLLLTFATLVLAFVAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 302

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+   G+AGA +      ++P       +I +   V +GG  +L         + G  
Sbjct: 303 TVSAVLCGIAGALYVPQVGIVNPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 362

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
            +                  F       + +   LV L+    ++ +   
Sbjct: 363 SVFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGVVER 398


>gi|91978828|ref|YP_571487.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91685284|gb|ABE41586.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 346

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 57/331 (17%), Positives = 127/331 (38%), Gaps = 26/331 (7%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            K    L    +    L            Y      ++LI  + A  L++VVG  GL+SL
Sbjct: 6   QKKISRLPAWLLPVLCLAAAIALPFVVPVYYVQFASKVLILGVLAMALNLVVGQGGLVSL 65

Query: 69  NCVIAYAIGAYSYVILGSRYG-LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                + +  Y   ++  +Y   S+ L +P + + +    +++G  +L+ RG Y  + TL
Sbjct: 66  CHAAFFGLSGYVLALMSPKYDAASLLLTLPAAVLAASFAALVIGALALRTRGVYFIMVTL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              E+   +                              +         +   +  Y+V+
Sbjct: 126 AFGEMLFYLFHDADFAGGSDGAFINVKP----------ELTIAGVRLLDLDKPLTFYFVV 175

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +   + ++++ + R+   +A    RDN++   +L   I   +L AF +S A  G+AG 
Sbjct: 176 LAVTVAAIALLVTVVRSPFGHALAAARDNERRARALGFPIFRIRLIAFVLSGALAGVAGY 235

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     ++P M  + ++  V+ +V++GG+++++        L+G+ E+       +  
Sbjct: 236 LAAVQFGFVAPQMLGWHQSATVLVMVLIGGLSTVTGPLIGALALLGLEEVLKATLEQWKL 295

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +                 + +  ++L+  + 
Sbjct: 296 AE---------------GLIVIAIVLLLPNG 311


>gi|222081820|ref|YP_002541185.1| branched-chain amino acid ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221726499|gb|ACM29588.1| branched-chain amino acid ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 637

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 63/324 (19%), Positives = 125/324 (38%), Gaps = 33/324 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A    L+L   L       Y   +  ++LI V+FA  L  ++   GL S     +  +GA
Sbjct: 317 AAAGVLILGAVLLPLVLGNYGLGVASEVLIAVIFATSLQFMMSVGGLDSFGHAASLGLGA 376

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y   +     G  +   + +  +++ A  ++ G   ++    Y A+ TL  ++IF +I  
Sbjct: 377 YGAALSVQWLGAPMEFALVIGPVVAAAISLVSGWFCVRLSNIYFAMLTLAFAQIFWSIAY 436

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +W  +T G  GI                     +PS +       Y++ L    LS   I
Sbjct: 437 QWVDVTGGDNGIVGV------------------WPSDWASGAKAFYWLALAAAMLSVGCI 478

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
            +L      +A R +RD+ +   +        + +AF VS+ F G+AG+  A  +  I P
Sbjct: 479 RYLTFAPFGHALRALRDSPQRAAATGIPRRTVQHTAFVVSAFFAGLAGSLLAFQKGSIFP 538

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           ++     +I  + +V+LGG  ++S       +               + +   +  S   
Sbjct: 539 EVLGIPMSIDGLVMVLLGGFGTVSGGIVGAIV---------------YKTASIWLMSNTD 583

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
               ++   + L+++     ++  
Sbjct: 584 LSRMILGGLIILLVVAFPEGIVGT 607



 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 89/305 (29%), Gaps = 28/305 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG--LSIWLLI 96
             +         + A GLS++ G   +++      Y +GAY    L +R+      W  +
Sbjct: 14  FLTGLSNAASLFLVASGLSLIFGVTRIVNFAHGAFYMLGAYIAYSLTTRWESVFGFWAAL 73

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            VSA +   CG ++ +  L+       +  L+ +     ++     +  G   +      
Sbjct: 74  LVSAAVVAVCGGLLEILLLRRIYRAPELLQLLATFGVTLVVEDGVRLIWGPEDLVGPRAP 133

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G                  +  +   ++     +   + L L R+      R    +
Sbjct: 134 GLSGA----------VEILGRPFPAYDLVLIALGPAVLGMLWLLLHRSRWGILVRAATQD 183

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +    +L     +     FA+        G                    + V+ +  +G
Sbjct: 184 RDMVSALGVNQKWLFTGVFALGVFLAAFGGGLQIPRDAVTHFMDLSVITEVFVVVV--IG 241

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+     A  ++  +                     F      LM + + +V+++R 
Sbjct: 242 GLGSIGGAFLAAIVVSELNAFGI--------------LVFPGISLVLMFVVMAVVLVLRP 287

Query: 337 HSLLR 341
                
Sbjct: 288 WGFFG 292


>gi|86748068|ref|YP_484564.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86571096|gb|ABD05653.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 351

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 60/337 (17%), Positives = 120/337 (35%), Gaps = 28/337 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +  K+L ++ VV  +L    L     Q Y+   G ++LI  +FA    +V G  G++
Sbjct: 15  RTGRRLKVLPIIEVV--VLAIGLLLPLVLQDYLTVFGTRVLILCLFALSFDLVWGYSGIM 72

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLS-IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           S    + +    Y   +L     ++ + L++P   +I  +  +++G   L  R     I 
Sbjct: 73  SFGQAVFFGSAGYGVALLARDLNVTSMLLVLPAGVLIGFSIALLIGGFLLLGRNPSSVIF 132

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
             + +        +         G      +  +                 +      YY
Sbjct: 133 VSLGTLTGSYAFDRLARGWYYLGGQNGIPSIPPMQ-----------IGGYDLTEGPVFYY 181

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            +L +  L      +L ++    A   +R+N++        +   K   F+++ A  G+A
Sbjct: 182 FVLAILLLVYLGCRFLTKSQFGLALAGLRENEQRIAFFGYQVQHIKAIIFSLAGAIAGLA 241

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G+ +A     + P+M     +  V+  V+ GG  +L      T ++  V           
Sbjct: 242 GSLYAFHEGFVWPNMLGVVMSTQVVLYVLFGGSGTLIGAVIGTVVIEIVSFWLSN----- 296

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                    S+      ++   + LVIL R   L+ L
Sbjct: 297 ---------SYQDIWPIILGCLMLLVILFRPAGLISL 324


>gi|295700153|ref|YP_003608046.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295439366|gb|ADG18535.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 678

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 59/284 (20%), Positives = 126/284 (44%), Gaps = 18/284 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+  + ++ILI V+FA  L  ++G  GL S      + +GAY   +      L +   +
Sbjct: 372 PYMPVLLVEILIAVLFATSLHFIMGPGGLHSFGHAAYFGLGAYGAALFLKVLNLPMEAAL 431

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +  +++    ++ G   ++  G YLA+ TL  ++I  +++ +W  +T G  GI      
Sbjct: 432 LLGPLLAVVGALVFGWFCVRLSGVYLAMLTLAFAQIVWSVVFQWDDVTGGSNGI------ 485

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                          +PS+++   +  YY+ L    L   ++  +  + +  A R  RD+
Sbjct: 486 ------------LGLWPSNWLSSPVSFYYLTLACAVLGVGLLRRMLFSPLGYAMRASRDS 533

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                ++   +   + ++F +++ F G+AG+ +A S+  ISP++   S ++  + +V+LG
Sbjct: 534 ALRAEAIGIDVKRVQWASFVIAALFCGLAGSLYAFSKGNISPEVISVSRSVDGLVMVLLG 593

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           G+ +LS      A+   + +       Y+   L        +  
Sbjct: 594 GLQTLSGPIVGAAVFTWLQDTVARQTDYWQALLGLAILLLVIAF 637



 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 95/312 (30%), Gaps = 18/312 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95
           + +         + A GLS++ G   +++      Y  G   AYS      +     WL 
Sbjct: 37  LVNGLADASTLFLVAAGLSLIFGVTRIVNFAHGSFYMFGIYVAYSIASRFGQTAGGFWLS 96

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  +A+     G ++ +  L+       +  L+ +     I         G   ++    
Sbjct: 97  VLAAALAVAVLGALVEMVVLRRIYPAPELFHLLATFALVLIFRDAALWLWGPDDLFGPRA 156

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                     +   +++    +   +   L RT      R    
Sbjct: 157 P----------HLAGAVDFLGHPLPTYDIALIVIGPVVLLLLWYALTRTRWGTLVRAATQ 206

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++   +L     +     F V +   G+ GA                        +V++
Sbjct: 207 DREMLGALGINQAWLFTGVFFVGAFLAGLGGALQGPRMSA--NLSLDLETIGNAFVVVVV 264

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S+     A  ++  +  LC G+      ++     S +        + + +V+++R
Sbjct: 265 GGMGSIPGAFIAALLIAEIKALCIGVGH---VTIFGIGLSLSRFTLVAEFVVMAVVLVVR 321

Query: 336 SHSLLRLRTPSN 347
              LL   + + 
Sbjct: 322 PWGLLGRASATV 333


>gi|116691683|ref|YP_837216.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
 gi|116649683|gb|ABK10323.1| amino acid/amide ABC transporter membrane protein 1, HAAT family /
           amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Burkholderia cenocepacia HI2424]
          Length = 603

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 70/312 (22%), Positives = 124/312 (39%), Gaps = 33/312 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +  Y+        +Y + A  L++V G++G +SL       IGAY+  +L S  G 
Sbjct: 324 PWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGAYASALLSSDLGW 383

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S  + IP +  I+   G ++  P+ + RG Y++IATL + E+   +++ W  +T G  GI
Sbjct: 384 SPAVTIPCAGAITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVILNWDGLTRGPLGI 443

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                L +                         Y+    +  + A + + L R+ +    
Sbjct: 444 TGIAPLPW------------------ATTARAAYWFTFAVLVVFALVQVRLLRSHLGRTL 485

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +R++  A  +        K  AFAV     G++G   A     I+   F    +I+ +
Sbjct: 486 RAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINHQTFDSQVSILAL 545

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           ++VILGG+ ++         LIG+ EL      Y                  +  + L L
Sbjct: 546 TMVILGGLGNVLGGIVGAIALIGLPELFRWAADY---------------RMLIYGLVLLL 590

Query: 331 VILMRSHSLLRL 342
           ++  R   LL  
Sbjct: 591 LVRFRPQGLLGT 602



 Score = 89.2 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 107/305 (35%), Gaps = 25/305 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  I   IY + A GL+++ G   L++      Y +GA+   +  +R+GL + + +
Sbjct: 6   DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +  GA G+ +    L+       IA L+ +     IL +   +  G     V   L
Sbjct: 66  AAVVVGCGALGIAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             +          +       +A +  +LR T +  A R    +
Sbjct: 126 PDWHVR-----------IAGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +     + FA++ A  G++G       + I P M  F   +  +  +++G
Sbjct: 175 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++      + +L  V      +    +  L  F               L + ++ R 
Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280

Query: 337 HSLLR 341
           + L  
Sbjct: 281 NGLFS 285


>gi|167846941|ref|ZP_02472449.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei B7210]
          Length = 503

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +              
Sbjct: 229 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 288

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 289 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 346

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 347 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 406

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  +     V+LGG+  ++        L  V + 
Sbjct: 407 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 464

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 465 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 502


>gi|186477003|ref|YP_001858473.1| urea ABC transporter permease UrtB [Burkholderia phymatum STM815]
 gi|184193462|gb|ACC71427.1| urea ABC transporter, permease protein UrtB [Burkholderia phymatum
           STM815]
          Length = 543

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 82/291 (28%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +      +       
Sbjct: 269 ITYGLIGVINMAHGEFLMIGAYATYVVQNLVQRYLPGAFDWYPLFAVPAAFAVAALVGIV 328

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 329 LER--LVLKHLYGRPLETLLTTFGISLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 386

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     + A+    L +T +    R +  N++    +     +    AFA 
Sbjct: 387 ILPYNRLAILAFSLIVVATAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTAYVDSCAFAF 446

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  L+        L  V + 
Sbjct: 447 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQLAGTVIGGFGLGLVSKA 504

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 505 IEPFWGAVLAK-------------IAVLVLIVLFIQKRPQGMFALKGRSAE 542


>gi|167618990|ref|ZP_02387621.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis Bt4]
          Length = 518

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/291 (12%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +     +        
Sbjct: 244 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPASFLAAAALGVV 303

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +                  +     S +         +
Sbjct: 304 LER--TVLRHLYGRPLETLLATFGVSLILIQATRTIFGAQNVQVVNPSWMSGGVTVMQNL 361

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 362 ILPYNRLAILAFALAVVGVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 421

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  ++        L  V + 
Sbjct: 422 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 479

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 480 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 517


>gi|218510466|ref|ZP_03508344.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Rhizobium etli Brasil 5]
          Length = 358

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 54/311 (17%), Positives = 109/311 (35%), Gaps = 7/311 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S   +++I ++   GL I +G+ G+LS   +   ++GAY ++ L      ++      
Sbjct: 48  LTSTVTELMIRIVVVVGLYIFIGNSGVLSFGHISFMSVGAYGFIWLSCCTLPTV------ 101

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +       ++   +L      +  A L          +  +      +    A     
Sbjct: 102 KPLYFPGLSEVLQNVALPVAQGTVGAAALAGFVALVAGAVLMRLSGTAASIATFALLAGQ 161

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                          S   +       V   +  L+  +    + +      R  RD   
Sbjct: 162 YALYKNWTNVTGGTASIANVPVFVTPLVGTVLAVLAVIVAWAHQVSKYGLMLRAARDEPT 221

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  +    I   +  AFA+S   +G+ GA  A     ++ D F      + ++++I+GG+
Sbjct: 222 AAKASGVNIWRVRTIAFALSGTIVGLGGAMHAGFVGVVTADAFYLGMTFMTLAMLIVGGI 281

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SLS        L  V EL   +        + F+    ++   L  +A+ LV+L R   
Sbjct: 282 GSLSGAVVGVVTLTAVTELLRRLEVGVPVGDMLFEMPRGLQEVGL-GVAMILVLLFRPAG 340

Query: 339 LLRLRTPSNFL 349
           ++  +  S  L
Sbjct: 341 IMAGKELSLNL 351


>gi|89068379|ref|ZP_01155782.1| ABC transporter permease protein [Oceanicola granulosus HTCC2516]
 gi|89046033|gb|EAR52092.1| ABC transporter permease protein [Oceanicola granulosus HTCC2516]
          Length = 327

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 59/328 (17%), Positives = 113/328 (34%), Gaps = 15/328 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    ++  LL          + +  ++  +++I  + A GL+I +G  GL+SL     +
Sbjct: 6   LLNALILAGLLAVPLWALAADEPFTITLATRVVILALAAVGLNIALGIGGLVSLGHAAFF 65

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IG Y+  IL         L + +  +       ++ L +         +  L+      
Sbjct: 66  GIGGYAMGILAHHAQTYTALDLGLFTVSGTKSMPVIWLVATLASMLAALLIGLLSLRTSG 125

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              I            +      + G    S+     FP    +  I  + +   +  L+
Sbjct: 126 VYFIMITLAFGQMFYYFAIGWAEYGGEDGLSIYLRNSFPGLNTLVPIHFFGLCFAVLCLA 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L  +    A    R       ++       KL AF VS A  G+AGA FA    
Sbjct: 186 LFLHARLAASPFGLALNAARQVPGRAEAVGLDPKRLKLLAFVVSGAITGLAGALFADLNR 245

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            +SP MF +  +  ++ +VILGG   +       A+ + +     G+  Y+         
Sbjct: 246 FVSPTMFSWHFSGEIMVLVILGGTARVMGPVAGAALYVALEHWLGGLTDYW--------- 296

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
                    +   L L++L     ++ +
Sbjct: 297 ------IIFLGAILLLIVLFARGGIVGM 318


>gi|330939916|gb|EGH43126.1| inner-membrane translocator [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 239

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 22/234 (9%)

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR-------SLI 167
           ++  GDYLAI TL   EI + +L  W   T G  G+ V    +      R        + 
Sbjct: 1   MRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGVPVPAPTFLGLEFGRRAKDGGVPIH 60

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
            +F F  +  +  IF+Y VL  +      I   L R  I  AW  +R+++ A  S+    
Sbjct: 61  EYFGFDYNPDLKFIFIYTVLFLVVLAVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNH 120

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
           +  KLSAF + ++  G+AG FFA+ +  ++P  F F E+ ++++IV+LGGM S   +  A
Sbjct: 121 VLVKLSAFTIGASTAGLAGVFFASYQGFVNPTSFTFFESALILAIVVLGGMGSTVGVVIA 180

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             +L    EL    + Y                  L  I + L+++ R   L+R
Sbjct: 181 AFVLTVAPELLRSFSEY---------------RVLLFGILMVLMMIWRPRGLIR 219


>gi|194335627|ref|YP_002017421.1| ABC transporter related [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308104|gb|ACF42804.1| ABC transporter related [Pelodictyon phaeoclathratiforme BU-1]
          Length = 634

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 57/304 (18%), Positives = 111/304 (36%), Gaps = 17/304 (5%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
               +    L      +Y   +   + +Y +   GL   VG LG ++L     +A+GAY 
Sbjct: 20  AAMFIALAALPTFWHGQYALGLLTLMAVYGVLLIGLDATVGYLGQVNLAQAALFALGAYG 79

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +        + L +      +   G  + LP+L+  G   A++TL  + +   +L ++
Sbjct: 80  AALAVQAGAP-LPLALVAGIAAALIPGAALALPALRLEGPQFALSTLSFATLSVIVLNEF 138

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +TNG  G+ V                        ++     Y++ L   F++      
Sbjct: 139 ESVTNGALGLSVTRP----------------RLFGLILDSTGFYWLCLATLFVAWEASQS 182

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L ++    A   +RD+  A  +L    +  K+ AFA  S   G+AG     +   + P  
Sbjct: 183 LLKSRFGLAIEALRDSPTATDALGIGALRHKVLAFAWGSTLAGLAGGLHTMNFGYLQPGA 242

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F +   +I++  V+ GG  S        A++  +  L      +          +F    
Sbjct: 243 FGYELMVILLLGVVFGGRRSQWGAFLGAAVVAMLPNLLSNRTLFSVLVSAGCILTFVPTF 302

Query: 321 TTLM 324
             L+
Sbjct: 303 RALL 306


>gi|239816981|ref|YP_002945891.1| urea ABC transporter permease [Variovorax paradoxus S110]
 gi|239803558|gb|ACS20625.1| urea ABC transporter, permease protein UrtB [Variovorax paradoxus
           S110]
          Length = 515

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 90/291 (30%), Gaps = 16/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++   +   +        +++      +    +  
Sbjct: 240 ITYGLMGVINMAHGELMMIGAYATYVMQGIFQRYMPEAAFGWYLVAAIPVAFLSSALVGA 299

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
             +   I  L      + +L  W      +  +        +G      +       S V
Sbjct: 300 VLERGVIRFL-YGRPLETLLATWGISLMLQQLVRSLFGAQNVGVENPGWMSGGFTMLSNV 358

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                   +++    +  ++   + RT +    R +  N+     +          AFA+
Sbjct: 359 TLPWNRICIIVFAVLVLLAMGWLIGRTRLGLFVRGVTQNRPIASCMGVNTARIDTYAFAL 418

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG   A S+          S  +    +V++GG+  L+    A   L  + + 
Sbjct: 419 GSGIAGLAGC--ALSQIGNVGPDLGQSYIVDSFMVVVMGGVGQLAGTVYAAMGLGILNKF 476

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             G                       +++ + + I  R   +  ++  S  
Sbjct: 477 IEGWAGAVLAK-------------IAVLVFIIIFIQKRPQGIFAMKGRSAE 514


>gi|326330402|ref|ZP_08196710.1| branched-chain amino acid ABC transporter, permease protein
           [Nocardioidaceae bacterium Broad-1]
 gi|325951677|gb|EGD43709.1| branched-chain amino acid ABC transporter, permease protein
           [Nocardioidaceae bacterium Broad-1]
          Length = 363

 Score = 91.9 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 67/332 (20%), Positives = 125/332 (37%), Gaps = 8/332 (2%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A    L+   F              I    + + A GL++++G  G +SL      AIG
Sbjct: 18  IAFSVVLVAVFFALPVLISDATLGTLILCGAFAIGAIGLNLLIGLTGQVSLGHAAFVAIG 77

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY    LG   G         + ++    G ++G  +L+ RG+YL I T+ +  + +++L
Sbjct: 78  AYCTSYLGDGRGWPFLAYFATAIVLGLVAGAVIGPFALRLRGNYLVIVTIGLVFVSEHVL 137

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
             W+ +T    G     R   +              S+    E  M+++   +  L+A +
Sbjct: 138 RNWESLTRPVRGTA-PTRDAAVAIGPLDFGAGLDLGSALYTREQSMFWLTWALVALAAVV 196

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L R+ +  A + +RD   A   +       K+ AFAV+SA    AG  +A     I 
Sbjct: 197 AHNLTRSRVGRAMQAVRDRDLAAEVIGVEPGRTKIGAFAVASAMAAAAGVIYALGLGAID 256

Query: 258 PDM----FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC---GMNFYYFNSLL 310
                       +I  ++I+ILGG+ ++        +++    L              + 
Sbjct: 257 YQELSGIHGLFMSITFVAIIILGGLGTVHGSILGALLVVYGQRLIANEGAAMPILGIPVE 316

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +   S    +  L    + + +L+    L  L
Sbjct: 317 RGWMSTGELNGVLFGGLIIVFLLLEPRGLAAL 348


>gi|218282091|ref|ZP_03488390.1| hypothetical protein EUBIFOR_00965 [Eubacterium biforme DSM 3989]
 gi|218216884|gb|EEC90422.1| hypothetical protein EUBIFOR_00965 [Eubacterium biforme DSM 3989]
          Length = 292

 Score = 91.9 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 93/289 (32%), Gaps = 12/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GAY   ++ +  GL     + +
Sbjct: 8   LVNGLSLGSIYALIALGYTMVYGIIKLINFAHGDIYMLGAYCAFLITTYCGLGFIPALLI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +  G  G+++   + K       I  LI +     +L        G         L  
Sbjct: 68  SMVFCGVVGVLIERIAYKPLRHATRITALITAIGVSYVLEYATQYIMGSEVRTYPKLLTS 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        F    V   +   Y+ +    L   +   +++T +  A R +  ++ 
Sbjct: 128 A-----------SFHLGPVTITMQQVYIFVITVILMIVLQFIVQKTKMGRAMRAVSVDED 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       F + SA  G+AG       + I+P M   +  +      + GG+
Sbjct: 177 AARLMGIDVDKTISFTFLLGSALAGVAGVLVGIYYNSINPLM-GMTPGLKAFIAAVFGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            S+         +     +        +   + +     +       + 
Sbjct: 236 GSIPGAMIGGLFIGIAETMVTAYGSSLYKDAIVYIILILILILKPAGLL 284


>gi|171320016|ref|ZP_02909088.1| inner-membrane translocator [Burkholderia ambifaria MEX-5]
 gi|171094743|gb|EDT39785.1| inner-membrane translocator [Burkholderia ambifaria MEX-5]
          Length = 603

 Score = 91.9 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 70/312 (22%), Positives = 122/312 (39%), Gaps = 33/312 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +  Y+        +Y + A  L++V G++G +SL       IGAY+  +L S  G 
Sbjct: 324 PWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGAAALLVIGAYASALLSSDLGW 383

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S  + IP +  I+   G ++  P+ + RG Y++IATL + E+    ++ W  +T G  GI
Sbjct: 384 SPAVTIPCAGAITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLAILNWDGLTRGPLGI 443

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                L +                         Y+    +    A + + L R+ +    
Sbjct: 444 AGIAPLPW------------------ATTARAAYWFTFAVLVAFALVQVRLLRSHLGRTL 485

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +R++  A  +        K  AFAV     G++G   A     I+   F    +I+ +
Sbjct: 486 RAVREDDVAARAHGIAPSRYKAIAFAVGGVAAGVSGGIAAHLYSYINHQTFDAQVSILAL 545

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           ++VILGG+ ++         LIG+ EL      Y                  +  + L L
Sbjct: 546 TMVILGGLGNVLGGIAGAVALIGLPELFRWAADY---------------RMLIYGVVLLL 590

Query: 331 VILMRSHSLLRL 342
           ++  R   LL  
Sbjct: 591 LVRFRPQGLLGT 602



 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 106/305 (34%), Gaps = 25/305 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  I   IY + A GL+++ G   L++      Y +GA+   +  +R G+ + + +
Sbjct: 6   DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRVGMPLPVAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +  GA G+ +    L+       IA L+ +     IL +   +  G     V   L
Sbjct: 66  AAVVVGCGALGIAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             +          +       +A +  +LR T +  A R    +
Sbjct: 126 PDWHVR-----------IAGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +     + FA++ A  G++G       + I P M  F   +  +  +++G
Sbjct: 175 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++      + +L  V      +    +  L  F               L + ++ R 
Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280

Query: 337 HSLLR 341
           + L  
Sbjct: 281 NGLFS 285


>gi|163742031|ref|ZP_02149420.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161384752|gb|EDQ09132.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
          Length = 356

 Score = 91.9 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 122/324 (37%), Gaps = 9/324 (2%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
            F               +I I+++      +++G  G++S    + + +GAY   +  + 
Sbjct: 28  AFAPFLFPGVRTVDTAARICIFIVLVASYDLLLGYGGIVSFAHTMFFGMGAYGVALTSTH 87

Query: 88  YGLSI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            G       +     A ++    +++GL SL+ R  + A+ TL ++     ++ +   +T
Sbjct: 88  MGRGFDALAIGAISGAALAAVLALLIGLFSLRVRAIFFAMITLAVASAVAVLVSQLSGLT 147

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF-VIYEIFMYYVLLGMCFLSASIILWLRR 203
            G+ G+                  F        +  ++  YY++ G   L    +L +  
Sbjct: 148 GGEDGLTFKTPRELGPAFKFGKETFDGTLFGVKLNGKLLTYYLIFGGSALLFLALLRVVN 207

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF-K 262
           +      + IR+N     ++   +++ +++A  +S+A   ++G+ +A     + PD    
Sbjct: 208 SPFGRVLQAIRENDFRAEAIGYRVVYYRVTATCLSAAIAALSGSLYAIWLRYVGPDTTLS 267

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYYFNSLLKFDCSFNM 318
            +  I ++ +V++GGM ++        + +     +  L   ++       L  +     
Sbjct: 268 MTIMIDILLMVVIGGMGTIYGAVIGATLFVLAQNYLQNLMGVLSGMTEGLPLLPELLSPD 327

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
           R    + +   L +      ++  
Sbjct: 328 RWLLWLGVLFILSVYFFPSGVVGR 351


>gi|84502498|ref|ZP_01000634.1| high-affinity branched-chain amino acid transport system permease
           protein livh / high-affinity branched-chain amino acid
           [Oceanicola batsensis HTCC2597]
 gi|84389310|gb|EAQ02107.1| high-affinity branched-chain amino acid transport system permease
           protein livh / high-affinity branched-chain amino acid
           [Oceanicola batsensis HTCC2597]
          Length = 337

 Score = 91.9 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 59/326 (18%), Positives = 126/326 (38%), Gaps = 25/326 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            L  +  +LL + L    +  Y  ++ + + +Y   A   +I+ G  G  SL     +  
Sbjct: 15  ALGALILVLLTMGLPLVIANDYHVNVLVLVFLYAGMASAWNILGGMAGQFSLGHTAFFGT 74

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +L +  G+S W+ +    ++S    +I+  P+ + RG + A+ATL   E  + +
Sbjct: 75  GAYTSTLLYNFAGVSPWIGMVAGGLLSMVFAVIIAYPAFRMRGVFFAMATLAFGEAIRIL 134

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           LI  +   +   G+ +     F          +      F++      Y L         
Sbjct: 135 LIYSRKHVDMPYGLSINWEPAFGNMIFEERSSYALLAGVFLLIVTLTAYGL--------- 185

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
                 R+      R IRD+++A  +    +   K+ A  +S+ F    G   A     I
Sbjct: 186 -----SRSHAGIYLRAIRDSEEAAVAAGIPMRRYKMIALLISAFFTSAGGTLLAQYVLYI 240

Query: 257 SPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            P   F  + ++ +  + +LGG+ +++       I + + ++   +          F   
Sbjct: 241 EPTTVFSMAYSVDLPLMALLGGIGTVAGPILGAFIALPLRDVLLDL----------FGSG 290

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
               H  +  + L +++++    L+ 
Sbjct: 291 AAGLHLVVYGVLLMVIVIVLPSGLIG 316


>gi|83955040|ref|ZP_00963696.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83840369|gb|EAP79542.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
          Length = 620

 Score = 91.9 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 55/323 (17%), Positives = 115/323 (35%), Gaps = 34/323 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V   L  L L       +   +   I+I+ +FA  L  ++G  GL+S      +  GA
Sbjct: 313 LLVMAGLFILALLPFYGGNFAVVLVTDIMIFCLFAASLHFMLGQGGLVSFGHAAFFGGGA 372

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +  +     + L + ++ + +G   +++G   L+  G Y A+ TL   ++  ++  
Sbjct: 373 YAAALFVTYADTPMELALVLAPICAGLAAVVIGWVCLRSTGVYFAMLTLAFGQLLWSLAF 432

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +W  +T G  G+       +                         YY+    C     ++
Sbjct: 433 QWGDVTGGDDGLVNIWPSDWASDND------------------VYYYLAFVFCIGGILLL 474

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
                     A R  RD+ +   ++       +  AF  +    G+AG  F  S+  I P
Sbjct: 475 RQAAHAPFGYAVRAARDSARQAEAMGINTKRIQWVAFTFAGIMAGLAGGLFVFSKGSIFP 534

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           +  + + +   + +V LGG+ +LS      A   GV +                      
Sbjct: 535 NELETARSFDALIVVFLGGVKTLSGGWVGGAFFEGVKDYLTRF----------------E 578

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
                + + +  V+++    ++ 
Sbjct: 579 YWRLALGLLIIFVVILGPEGIVG 601



 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 99/308 (32%), Gaps = 28/308 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96
           I +         M A GLS++ G   +++      Y +GAY     +      +  W  I
Sbjct: 8   ILTGLANAGALFMVASGLSLIFGVTRVVNFAHGSFYMLGAYVGYSLMQVLPGMVGFWGAI 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ +I G  G+I+ +  L+       +  L+ +     ++     +  G   +      
Sbjct: 68  LLAGLIVGLIGVIVEICVLRPVYSAPELFQLVATFGVILVIQDLALMIWGPQDLLGPRAP 127

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G                     +   +++   F++ ++   + +T +    R    +
Sbjct: 128 GLKGV----------IRIMGEPVPQYDIALIIITPFVAIALWYLITKTRVGTLVRAATQD 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +L     +     F +  A  G+ GA            +  FS    V  +V++G
Sbjct: 178 REMVGALGVNQAWLFTGVFFLGCALAGLGGALQLPKGGA--DLLMDFSIIGSVFVVVVIG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM SL     A  I+  +                            LM + + +V++ R 
Sbjct: 236 GMGSLPGAYLAAVIISVLNVFGVTYA--------------PQSTLVLMFVVMVIVLMFRP 281

Query: 337 HSLLRLRT 344
             LL    
Sbjct: 282 FGLLGKEE 289


>gi|146319200|ref|YP_001198912.1| branched-chain amino acid ABC transporter permease [Streptococcus
           suis 05ZYH33]
 gi|145690006|gb|ABP90512.1| ABC-type branched-chain amino acid transport system, permease
           component [Streptococcus suis 05ZYH33]
          Length = 315

 Score = 91.9 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 80/340 (23%), Positives = 143/340 (42%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + I   + +    L+   + A     Y   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNAIWLAILLAGFGLIQGLVSAGILNFYYIQIVQQIGIQIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVI--LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I            + + V  +ISGA  +++G+P+L+ +GDYLAIATL
Sbjct: 66  HAGFMAIGAYAVGILGKMMPTYGGFAIALIVGMLISGAVALLVGIPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++EI + ++I    +TNG AGI                                   ++
Sbjct: 126 GVAEIIRILIINGGSVTNGAAGIMSIPLFTSWP-------------------------LV 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++  + +   R+ +  A  ++R+++ A  S+     F K+SAF   +    +AG 
Sbjct: 161 YIFVIITTLVTVNFLRSPMGRATISVREDEIAAESVGVNPTFVKVSAFVFGAMTAAIAGG 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     I P  F F  ++ V+ I++LGG+ S++    A  +L  +             
Sbjct: 221 LHAGYVGTIVPKDFAFMTSVNVLIIIVLGGLGSITGTFVAAIVLGILNVFLKSY------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                    +     +  +AL L++++R   LL  +  S 
Sbjct: 275 ---------SDISMIIYSLALILLMILRPGGLLGTKEFSV 305


>gi|89902304|ref|YP_524775.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89347041|gb|ABD71244.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 358

 Score = 91.9 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 80/345 (23%), Positives = 140/345 (40%), Gaps = 23/345 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +  +++  +L + A       F+ +    S     ++ I  LI  + A G++I+VG
Sbjct: 18  QIFPIAQDRWAVLLLIAA------AFIVVPMLSSGYMFRAILIPFLIMSLAALGVNILVG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG-ACGMIMGLPSLKFRGD 120
             G +SL      A+GAY+      R      LL  +   +   A G++ GLPSL+ +G 
Sbjct: 72  YCGQISLGSGAFMAVGAYAAFNFFVRVPGMPLLLALILGGLCASAFGILFGLPSLRVKGL 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL        + ++ K  TN                +    +   +     +   
Sbjct: 132 YLAVATLAAQFFSDWMFLRIKWFTNDA-------------PSGSVSVAGLQVFGIPIESP 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
              Y   L +  + A +   L R+A+   W  IRD   A   +    ++AKLSAFAVSS 
Sbjct: 179 TSKYLFCLTILVVLALLAKNLVRSAVGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            IG+AGA +         P  F    +  ++ +VI+GGM S+       A ++ +     
Sbjct: 239 IIGVAGALWGFVYLSAWEPAAFSVDLSFKLLFMVIIGGMGSIMGSFFGAAFIVILPIFLN 298

Query: 300 GMNFYYFNSLLKFDCSFNMRH--TTLMVIALFLVILMRSHSLLRL 342
               +   ++     +    H    +    +   +++  H L +L
Sbjct: 299 QFLPFLGRAVGVPISTVVTSHAELIVFGSLIVWFLIVEPHGLAKL 343


>gi|17546966|ref|NP_520368.1| transmembrane ABC transporter protein [Ralstonia solanacearum
           GMI1000]
 gi|17429267|emb|CAD15954.1| probable transmembrane abc transporter protein [Ralstonia
           solanacearum GMI1000]
          Length = 341

 Score = 91.9 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 59/320 (18%), Positives = 116/320 (36%), Gaps = 27/320 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
                   L       Y+   G Q+LI  +FA  L +V+G  G++SL     + +GAY+ 
Sbjct: 32  IAFWCVPVLVFFILPDYLV-FGSQVLIVGLFALSLDLVLGYAGIVSLGHAGFFGLGAYTA 90

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +L +         +  +A ++   G  +    ++ +     + TL +  +      K  
Sbjct: 91  GLLAAHGWGEPLSGLVAAAAVAALTGCCVSFLVVRGQDLTRLMVTLGIGLMLYEAANKMA 150

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G  G+        LG               F +     Y   L + F    ++  L
Sbjct: 151 FLTGGVDGLSGVTMDKLLG------------SFEFDLSGRTAYVYSLAVLFGLFVLLRRL 198

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R+    + R I+       +L   +    ++AF VS+A  G+AG   A +   +  D  
Sbjct: 199 VRSPFGLSLRGIQQGPGRMPALGADVRMRLVAAFTVSAAVAGVAGGLLAQTTQFVGLDAL 258

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            FS +  ++ +++LGG   L       A+ +   ++  G+N               +   
Sbjct: 259 GFSRSAELLIMLVLGGAGRLYGALVGAAVFMLAQDVLAGIN--------------PVYWQ 304

Query: 322 TLMVIALFLVILMRSHSLLR 341
             + + L  ++L     +L 
Sbjct: 305 FWIGLLLMAIVLFARGGILG 324


>gi|297622818|ref|YP_003704252.1| inner-membrane translocator [Truepera radiovictrix DSM 17093]
 gi|297163998|gb|ADI13709.1| inner-membrane translocator [Truepera radiovictrix DSM 17093]
          Length = 325

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 71/305 (23%), Positives = 122/305 (40%), Gaps = 32/305 (10%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           YI        ++ + A  L I+VG  G +SL      A GAY+   L S       L + 
Sbjct: 40  YIVYNVTLFFVFSLVAVALMILVGFTGQVSLGHAGFLAAGAYTTAYLVSVGWP-FVLALV 98

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            + ++SGA G+++GLP+L+  G YLAIATL      Q IL  W+ +      +    RL 
Sbjct: 99  AALLVSGALGVVIGLPALRLEGPYLAIATLGFGLAIQQILNNWRLVGASTGMLADRPRLL 158

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +     +                  Y+  L +      +   L+R+ +  A+  IRD +
Sbjct: 159 GVDFFGDT----------------PFYFFTLVIVGFFVWLAFNLKRSHVGRAFVAIRDAE 202

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A       +   K  AFA+S+A  G+AG  + A    I+P+ F    ++  + ++++GG
Sbjct: 203 LAAQMSGVDVARFKTLAFALSAAMTGVAGGLYGALLGYITPESFNLILSVKFLLMIVVGG 262

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           +  L       A + G+  +                     R   L  + + L++L+   
Sbjct: 263 LGFLPGAILGAAFITGLEVVLSAQ---------------QNRSQLLFGVVVILIMLLEPR 307

Query: 338 SLLRL 342
            L   
Sbjct: 308 GLYGR 312


>gi|124265891|ref|YP_001019895.1| putative branched-chain amino acid transport system, permease
           [Methylibium petroleiphilum PM1]
 gi|124258666|gb|ABM93660.1| putative branched-chain amino acid transport system, permease
           component [Methylibium petroleiphilum PM1]
          Length = 534

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 89/288 (30%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  +  + +    WL       I  A  +     +   
Sbjct: 262 ITYGLMGVINMAHGELIMIGAYATYLTQNAFRA--WLPDHFDWYIVAAIPLSFLAAAAVG 319

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W        G+        +     + +       S +
Sbjct: 320 AVLERGVIRFLYGRPLETLLATWGISLVLMQGVRSLFGAQNVPVENPAWLSGGVQIMSNL 379

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       +++    +   I   + +T +    R++  N+     +          AFA+
Sbjct: 380 VLPWNRIAIVVFAAIVLGGIAFLIAKTRLGLFVRSVTQNRPMASCMGVNTARVDTLAFAL 439

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+AG   A S+             +    +V+LGG+  L+    A   L  + + 
Sbjct: 440 GAGVAGLAGC--AVSQVGNVGPDLGQGYIVDSFMVVVLGGVGQLAGTVYAALGLGVINKF 497

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
             G                      ++++ + + I  R   L  L+  
Sbjct: 498 LEGWAGAVLAK-------------IIVLVFIVVFIQKRPQGLFALKGR 532


>gi|170723796|ref|YP_001751484.1| urea ABC transporter permease UrtC [Pseudomonas putida W619]
 gi|169761799|gb|ACA75115.1| urea ABC transporter, permease protein UrtC [Pseudomonas putida
           W619]
          Length = 359

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 100/324 (30%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
           A +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  ALQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      + L  L      L           + +     
Sbjct: 103 DGLPGFMTFLSWSELPWYWAGTQHFAWALCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       S      F  +       ++ + +G+   S  + 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTSFRTILGFDIAAQGTRAVLFLLTVGLLLASLYLC 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WRLTQSKFGRLLTAVRDAENRMMFCGYDPRGFKLLVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     LV L     ++ L
Sbjct: 329 FWLFFLGALFILVTLYLPKGVVGL 352


>gi|182417308|ref|ZP_02948647.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH [Clostridium butyricum 5521]
 gi|237669014|ref|ZP_04528998.1| inner-membrane translocator [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182378816|gb|EDT76335.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH [Clostridium butyricum 5521]
 gi|237657362|gb|EEP54918.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 294

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 94/303 (31%), Gaps = 23/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +   Q  +Y + A G ++V G + L++      Y  GAY+     S         +  
Sbjct: 8   IVNGVCQGSVYALIAIGYTMVYGIIKLINFAHCDIYMFGAYAGYFAVSVLRFGFTETLLF 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +   A GM++   + K   +   +   I +   + +L                     
Sbjct: 68  AMVACAALGMLIERVAYKPLRNSPKVTLFITTMGVELLLQNLIKTD---------MLAGP 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +   +I    +    VI   +    +L        +   +++T++  A R    +  
Sbjct: 119 NTKSFPEIIPLKSYNIGSVIISNYQIIAILTTVIFCILLQFIIKKTSVGRAMRATSYDMD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +           FA+ S   G AG        +++P M      +      +LGG+
Sbjct: 179 AASLMGINTNKVISLTFALGSLLAGTAGVLVGLLYPKLTPAM-GVMPGLKSFVAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        I+  +  L         +  + F               L +++L++   
Sbjct: 238 GIIPGAMVGGIIMGLIETLSKVYISSGLSDAIAFS-------------ILIIILLVKPTG 284

Query: 339 LLR 341
           L  
Sbjct: 285 LFG 287


>gi|119961868|ref|YP_947058.1| branched-chain amino acid transport system, permease component
           [Arthrobacter aurescens TC1]
 gi|119948727|gb|ABM07638.1| putative branched-chain amino acid transport system, permease
           component [Arthrobacter aurescens TC1]
          Length = 322

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 56/294 (19%), Positives = 113/294 (38%), Gaps = 6/294 (2%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           +  G  GLL+       A+GAY + I    +    +L + ++ + S     I+G+P+L+ 
Sbjct: 31  VHFGYSGLLNFGQAGFMAVGAYGFAISTLTFDAPFFLALLIAVLCSVIFAFILGIPTLRL 90

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           R DYLAI T+  +EI + ++   +  +   +   +A       +                
Sbjct: 91  RADYLAIVTIAAAEIVRYVVTTNQLTSVTGSANGLAAFEGTFYSM---NPFPEGSYMGMN 147

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
             + F+  V  G+  +   ++  L R+      + IR+++ A  SL   +   K+ A  +
Sbjct: 148 NRDFFIRVVGWGLVIVCCVLVWLLMRSPWGRVLKGIREDENAVRSLGKNVYAYKMQALII 207

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
                 +AG  F   R  + P  +       + + ++LGGM ++        I   V+ L
Sbjct: 208 GGVLGALAGMIFTLPRGAVQPSNYGTELTFFLWTCLLLGGMATVLGPVIGAMIFWVVLSL 267

Query: 298 CCGMNFYYFNSLLKFDC---SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
              + +    S                 L+ +AL L+++ R   +   +    F
Sbjct: 268 TQSLLYGLIESGAITWLTTVQAGQLRYILVGVALMLLMIFRPQGVFGNKKELAF 321


>gi|161523977|ref|YP_001578989.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
 gi|189351261|ref|YP_001946889.1| branched-chain amino acid transporter permease [Burkholderia
           multivorans ATCC 17616]
 gi|160341406|gb|ABX14492.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
 gi|189335283|dbj|BAG44353.1| branched-chain amino acid transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 316

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 97/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-----W 93
           I +  +   +Y + A G ++V G LG+++        IGA   +   +            
Sbjct: 8   ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPELGNI 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +   I+      +G    +     L  A  +   I    +                
Sbjct: 68  ATLTIGLGIAAVVCAFVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    ++     +   ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFVVMGGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            ++      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|254253037|ref|ZP_04946355.1| Branched-chain amino acid ABC-type transport system [Burkholderia
           dolosa AUO158]
 gi|124895646|gb|EAY69526.1| Branched-chain amino acid ABC-type transport system [Burkholderia
           dolosa AUO158]
          Length = 540

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +              +++              
Sbjct: 266 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRYAPAAFDWYPLVAVPASFAAAALVGIV 325

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 326 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVANPSWMSGGVTVMQSL 383

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     + A     L +T +    R +  N++    +          AFA 
Sbjct: 384 ILPYNRLAILAFALAVVAIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 443

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          +  I     V+LGG+  ++        L  V + 
Sbjct: 444 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 501

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +   +  S  
Sbjct: 502 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAPKGRSAE 539


>gi|311693821|gb|ADP96694.1| branched-chain amino acid transport permease [marine bacterium
           HP15]
          Length = 331

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/301 (14%), Positives = 96/301 (31%), Gaps = 26/301 (8%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             ++IL + +FA   +++ G  GLLS       A G Y+   L S Y      +  ++  
Sbjct: 47  FLMKILCFALFAVAFNLLFGFTGLLSFGHAAFLATGGYTTGYLLSNYSGLSTEMGIIAGT 106

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           ++              R         +               T G+ G++   R      
Sbjct: 107 LAATVLGTGFALLSIRRQGIYFAMVTLALAQLVFFFFVQSEFTGGEDGMHGIPR------ 160

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                          +   + MYY +L +      ++  +  +      + I+ N+    
Sbjct: 161 -------GELLGFINLEDNLNMYYFVLAVFIACYLLVQRIVGSPFGQVLKAIKQNEPRAV 213

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   K+ AF +S+A  G+AG+  +      S +   +  +  VI + ++GGM +L
Sbjct: 214 SLGYNVDRYKVLAFVISAALAGLAGSMKSVVFQLASLNDAHWHMSGEVILMTLVGGMGTL 273

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    ++ +           +                ++     L +L     ++ 
Sbjct: 274 LGPVVGATFVVNIEYQLSQGALRDWVDP-------------ILGGIFVLTVLAFRSGIVG 320

Query: 342 L 342
            
Sbjct: 321 E 321


>gi|312862995|ref|ZP_07723234.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus vestibularis F0396]
 gi|311101490|gb|EFQ59694.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus vestibularis F0396]
          Length = 316

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 75/337 (22%), Positives = 137/337 (40%), Gaps = 42/337 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + I   L +   L+L     +     Y   + + I I ++   G ++V+G  G  +L 
Sbjct: 6   KVNLIWFGLIIGLFLILKGLELSGIMNLYYIQILMGIGISILMGLGTNLVLGFSGQFTLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAYS  I+          +L + V  +I+    +I G+P+L+ +GDYLAIATL
Sbjct: 66  QAGFMAIGAYSSAIITGMMPTYGGFYLSMVVGVIIAAVVALIFGIPTLRLKGDYLAIATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            M+EI + I++    +TNG AG+                                   V+
Sbjct: 126 GMAEIIRIIIVNGGELTNGAAGLTGILPYTSWP-------------------------VI 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                +   ++L   R+A      T+R+++ A  S+   +   K+  F + +    +AG+
Sbjct: 161 YFFVVIITILVLNFLRSATGRQAITLREDEIAAESMGVNVTKMKVIIFVIGAMISAIAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            + +    + P  F   ++I  + I +LGG+ S++    A  +L  +      +      
Sbjct: 221 LYVSYIGTVVPKDFTIMKSIDYLIIAVLGGLGSITGTIIAAVVLGIINMFLQNV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                    +     +  +AL LV+L R   LL  + 
Sbjct: 275 ---------SNLRMIIYALALILVMLFRPGGLLGTKE 302


>gi|291530474|emb|CBK96059.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           (TC 3.A.1.4.-) [Eubacterium siraeum 70/3]
          Length = 293

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 102/307 (33%), Gaps = 23/307 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             + +      IY + A G ++V G   +L+        +G Y      + + ++ +L +
Sbjct: 5   NNLINGISLGSIYAVIALGYTLVYGIAKMLNFAHGDVIMVGGYVIFYSMTSFSINPYLSV 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ ++    G+++   + K      +++ LI +      L     +  G+  +     +
Sbjct: 65  LIAVIVCTVLGIVIEKVAYKPLRQATSLSVLITAIGVSYFLQNSALLLFGEKPVNFTSVV 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                ++             V+        ++    +   + L++ +T    A   + ++
Sbjct: 125 NVPSISLFD---------GQVVITGEAIVAIVVSILIVIGLSLFINKTKSGRAMLAVSED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   I       FA+ S    +AGA   ++   +          I      + G
Sbjct: 176 KDAAQLMGININRTISLTFAIGSGLAAIAGALLCSAYPTLQNTT-GAMPGIRAFVAAVFG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        ++  +  L         +               ++   L LV++++ 
Sbjct: 235 GIGSVPGAMIGGILIGVIEILGRAYISPQLSDA-------------IVFAVLILVLIIKP 281

Query: 337 HSLLRLR 343
             +L  +
Sbjct: 282 TGILGKK 288


>gi|284159966|ref|YP_001060080.2| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|283775065|gb|ABN81543.2| urea ABC transporter, permease protein UrtB [Burkholderia
           pseudomallei 668]
          Length = 542

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +              
Sbjct: 268 ITYGLIGVINMAHGEFLMIGAYATYVVQTFVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 327

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 328 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 385

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 386 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 445

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  +     V+LGG+  ++        L  V + 
Sbjct: 446 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 503

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 504 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 541


>gi|134294952|ref|YP_001118687.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|134138109|gb|ABO53852.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia vietnamiensis G4]
          Length = 539

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/291 (11%), Positives = 77/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +              +++              
Sbjct: 265 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRYAPAAFDWYPLVAVPVSFAAAALVGIV 324

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 325 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVSVMQNL 382

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 383 ILPYNRLVILAFALAVVFVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 442

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          +  I     V+LGG+  ++        L  V + 
Sbjct: 443 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 500

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +   +  S  
Sbjct: 501 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAPKGRSAE 538


>gi|300715224|ref|YP_003740027.1| ABC transporter permease [Erwinia billingiae Eb661]
 gi|299061060|emb|CAX58167.1| ABC transporter, permease protein (UrtB-like) [Erwinia billingiae
           Eb661]
          Length = 524

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 82/288 (28%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY+  ++ + +       +    +++      +       
Sbjct: 251 ITYGLLGVINMAHGEMLMLGAYATWMVQTLFQRFAPEWLAFYPLLALPVAFFVTAAIGMA 310

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 I   +     + +L  W         + +      L       +         +
Sbjct: 311 LER--TIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNLEVANPPWLSGGLQVLPNL 368

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V++ +  +     L L +T +    R +  N+              + AF +
Sbjct: 369 VLPYNRMAVIVFVFAVLFLTWLLLNKTRLGMNVRAVTQNRAMADCCGVPTGRVDMLAFGL 428

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+ GG+  L+    A   L  + ++
Sbjct: 429 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVTGGVGQLAGTVVAAFGLGILNKV 486

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                    L+++ + L I  R   L   +  
Sbjct: 487 LEPQIGAVLGK-------------ILILVLIVLFIQKRPQGLFAFKGR 521


>gi|288871321|ref|ZP_06117217.2| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Clostridium hathewayi DSM 13479]
 gi|288863878|gb|EFC96176.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Clostridium hathewayi DSM 13479]
          Length = 299

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 97/307 (31%), Gaps = 23/307 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +      +Y + A G ++V G   +L+        IG Y    + S  GL     I
Sbjct: 11  SYFINGLSLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGGYVVFTVVSTMGLPPLAGI 70

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ +I    G+ +   + +       +A LI +     +L     +  G         +
Sbjct: 71  LLAVIICTVLGVTIEKVAYRPLRMASPLAVLITAIGVSYLLQNIALLVFGSNPKSFTSVV 130

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +             +         ++    +   +  ++++T    A   + ++
Sbjct: 131 TIPALKLAG---------GRLTISGETLVTIVSCIVIMVVLTTFIKKTKAGQAMLAVSED 181

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ SA   +AG    ++   ++P        I      + G
Sbjct: 182 KGAAQLMGINVDGTIALTFAIGSALAAIAGTLLCSAYPTLTPYT-GSMPGIKAFVAAVFG 240

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        +L  +  L         +               ++   L +V+L++ 
Sbjct: 241 GIGSIPGAFIGGLLLGVIENLSKAYISSQLSDA-------------IVFAVLIIVLLVKP 287

Query: 337 HSLLRLR 343
             +L  +
Sbjct: 288 TGILGKK 294


>gi|218886677|ref|YP_002435998.1| branched-chain amino acid ABC transporter permease [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218757631|gb|ACL08530.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 313

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 65/326 (19%), Positives = 126/326 (38%), Gaps = 35/326 (10%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L  +  L +   L       Y+  + I  +++ +     +++ G  G +S      + +G
Sbjct: 5   LVPLVVLAMLAGLPLLGLNSYVMHILILSIMWTLAGMAWNLLGGYCGQVSFGHAAFFGMG 64

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYS  ++    GLS W    VS  +     + MG   L+ RG Y  +ATL + E+ +   
Sbjct: 65  AYSAGLIHLHLGLSPWWGFLVSLPLVALVALAMGSVVLRLRGPYFVLATLAIGEVLRITC 124

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                 T G  GI                       +   + +   YY++LG+  L   +
Sbjct: 125 ENLTDFTKGTLGI---------------------MITRTWVEKTQYYYIILGLALLGFVV 163

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +  +     +  IR++Q A  S+       K  A  VS+   G+AGAF+      I 
Sbjct: 164 CRAIVHSRWGYYFVAIREDQDAAESMGIDTTRYKTIALTVSAMLTGLAGAFYTNYMGYID 223

Query: 258 PDMFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           P +       +I++I +V++GG+ +    A    I++ + E    +              
Sbjct: 224 PGVVFSLGEISILIIMVVMVGGVATEWGPALGAGIMVILAEYIRSL------------PL 271

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
             + + T+  + L ++I+   + L+ 
Sbjct: 272 IGVAYQTMFGVLLIVIIIYLPNGLVG 297


>gi|167739817|ref|ZP_02412591.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia pseudomallei 14]
 gi|167912168|ref|ZP_02499259.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia pseudomallei 112]
          Length = 538

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +              
Sbjct: 264 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 323

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 324 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 381

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 382 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 441

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  +     V+LGG+  ++        L  V + 
Sbjct: 442 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 499

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 500 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 537


>gi|53720262|ref|YP_109248.1| putative branched-chain amino acid transport system permease
           [Burkholderia pseudomallei K96243]
 gi|167817040|ref|ZP_02448720.1| putative branched-chain amino acid transport system, permease
           component [Burkholderia pseudomallei 91]
 gi|167903909|ref|ZP_02491114.1| putative branched-chain amino acid transport system, permease
           component [Burkholderia pseudomallei NCTC 13177]
 gi|217421022|ref|ZP_03452527.1| urea ABC transporter, permease protein UrtB [Burkholderia
           pseudomallei 576]
 gi|254191794|ref|ZP_04898297.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|52210676|emb|CAH36660.1| putative branched-chain amino acid transport system, permease
           component [Burkholderia pseudomallei K96243]
 gi|157939465|gb|EDO95135.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|217396434|gb|EEC36451.1| urea ABC transporter, permease protein UrtB [Burkholderia
           pseudomallei 576]
          Length = 540

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +              
Sbjct: 266 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 325

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 326 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 383

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 384 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 443

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  +     V+LGG+  ++        L  V + 
Sbjct: 444 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 501

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 502 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 539


>gi|222109678|ref|YP_002551942.1| inner-membrane translocator [Acidovorax ebreus TPSY]
 gi|221729122|gb|ACM31942.1| inner-membrane translocator [Acidovorax ebreus TPSY]
          Length = 358

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 79/345 (22%), Positives = 139/345 (40%), Gaps = 23/345 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +  ++      +  ++   + F+ + A  S  +  ++ I ++I  M A G++I+VG
Sbjct: 18  QIFPITQDR------IAILLLLAVAFVAVPAMASDYFYRAILIPLVIMSMAALGVNILVG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGD 120
             G +SL      A+GAY       R+     +  + +  + +   G++ GLPSL+ +G 
Sbjct: 72  YCGQISLGSGAFMAVGAYGAFNFFVRFPGMPLVPALILGGLCATFFGILFGLPSLRVKGL 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL        + ++ K  TN      V+     +                     
Sbjct: 132 YLAVATLAAQFFSDWMFLRIKWFTNNSDSGSVSVSNLQVFGMPLDSAMAK---------- 181

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
              Y   L +  + A +   L R AI   W  IRD   A   +    ++AKLSAFAVSS 
Sbjct: 182 ---YLFCLTLLVVVALLAKNLVRGAIGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            +GMAGA +A        P  F    +  ++ +VI+GGM S+       A ++ +     
Sbjct: 239 IVGMAGALWAFVHLGSWEPAAFSVEVSFRLLFMVIIGGMGSIMGAFFGAAFIVVLPIFLN 298

Query: 300 GMNFYYFNSLLKFDCSFNMRH--TTLMVIALFLVILMRSHSLLRL 342
                          +  + H    +    +   +++  H L +L
Sbjct: 299 QFLPAVAGLFGVDISTAAVSHAELMIFGALIVWFLIVEPHGLAKL 343


>gi|83944093|ref|ZP_00956549.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
 gi|83844960|gb|EAP82841.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
          Length = 620

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 55/323 (17%), Positives = 115/323 (35%), Gaps = 34/323 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V   L  L L       +   +   I+I+ +FA  L  ++G  GL+S      +  GA
Sbjct: 313 LLVMAGLFILALLPFYGGNFAVVLVTDIMIFCLFAASLHFMLGQGGLVSFGHAAFFGGGA 372

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +  +     + L + ++ + +G   +++G   L+  G Y A+ TL   ++  ++  
Sbjct: 373 YAAALFVTYADTPMELALVLAPICAGLAAVVIGWVCLRSTGVYFAMLTLAFGQLLWSLAF 432

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +W  +T G  G+       +                         YY+    C     ++
Sbjct: 433 QWGDVTGGDDGLVNIWPSDWASDND------------------VYYYLAFVFCIGGILLL 474

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
                     A R  RD+ +   ++       +  AF  +    G+AG  F  S+  I P
Sbjct: 475 RQAAHAPFGYAMRAARDSARQAEAMGINTKRIQWVAFTFAGIMAGLAGGLFVFSKGSIFP 534

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           +  + + +   + +V LGG+ +LS      A   GV +                      
Sbjct: 535 NELETARSFDALIVVFLGGVKTLSGGWVGGAFFEGVKDYLTRF----------------E 578

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
                + + +  V+++    ++ 
Sbjct: 579 YWRLALGLLIIFVVILGPEGIVG 601



 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 99/308 (32%), Gaps = 28/308 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96
           I +         M A GLS++ G   +++      Y +GAY     +      +  W  I
Sbjct: 8   ILTGLANAGALFMVASGLSLIFGVTRVVNFAHGSFYMLGAYVGYSLMQVLPGMVGFWGAI 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ +I G  G+I+ +  L+       +  L+ +     ++     +  G   +      
Sbjct: 68  LLAGLIVGLIGVIVEICVLRPVYSAPELFQLVATFGVILVIQDLALMIWGPQDLLGPRAP 127

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G                     +   +++   F++ ++   + +T +    R    +
Sbjct: 128 GLKGV----------IRIMGEPVPQYDIALIIITPFVAIALWYLITKTRVGTLVRAATQD 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +L     +     F +  A  G+ GA            +  FS    V  +V++G
Sbjct: 178 REMVGALGVNQAWLFTGVFFLGCALAGLGGALQLPKGGA--DLLMDFSIIGAVFVVVVIG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM SL     A  I+  +                            LM + + +V++ R 
Sbjct: 236 GMGSLPGAYLAAVIISVLNVFGVTYA--------------PQSTLVLMFVVMVIVLMFRP 281

Query: 337 HSLLRLRT 344
             LL    
Sbjct: 282 FGLLGKEE 289


>gi|319792428|ref|YP_004154068.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315594891|gb|ADU35957.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 319

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 58/301 (19%), Positives = 124/301 (41%), Gaps = 21/301 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +  +  L++ L L          S+  ++LIY + A G ++++G  GLLS    I + +G
Sbjct: 5   ITFLLALIVTLALPLFMRSG---SLASEVLIYALAALGCNLLLGYTGLLSFGQGIFFGLG 61

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           +Y+  IL +R  L + L +  +  +      ++G  +++ RG Y  + TL  +++F  + 
Sbjct: 62  SYTIAILLTRLQLPMPLALLAAIAMGALGAAVVGWVAIRQRGTYFVMLTLAFAQMFYFVA 121

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                +T G  G+    R  F+ T  +                   Y  +  M  ++ ++
Sbjct: 122 YTASGLTGGDNGLLDVPRPAFMDTPWK------------------YYAFVAVMFLIAFAL 163

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +L +  +        IRDN+    ++   +   KL AF +S A  G+AG   A       
Sbjct: 164 LLRVTDSIFGRTLLAIRDNEDRAAAVGYNLKRFKLLAFVISGAVTGLAGGLHAMMTGIAP 223

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
               ++  + +++ I ++GG  +L      +A  + + +    +   +   L       +
Sbjct: 224 LSNAEYHTSEMILVITVIGGTGNLFASVLGSAFYVLLADWLSTLWPRWLLLLGLLLIGVS 283

Query: 318 M 318
           +
Sbjct: 284 I 284


>gi|241663650|ref|YP_002982010.1| inner-membrane translocator [Ralstonia pickettii 12D]
 gi|240865677|gb|ACS63338.1| inner-membrane translocator [Ralstonia pickettii 12D]
          Length = 344

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 57/320 (17%), Positives = 116/320 (36%), Gaps = 27/320 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
                           Y+   G Q+LI  +FA  L +V+G  G++SL     + +GAY+ 
Sbjct: 32  IAFWCVPIAVFFLLPDYLV-FGSQVLIVGLFALSLDLVLGYAGIVSLGHAGFFGLGAYTA 90

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +L +         +   A+++   G  +    ++ +     + TL +  +      K  
Sbjct: 91  GLLAAHGWGEPLTGLAAGAVVAALAGFCVSFLVVRGQDLTRLMVTLGIGLMLYEAANKMA 150

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G  G+                +        F +     Y   L + FL    +  L
Sbjct: 151 FLTGGVDGLSGV------------TMHKLLGTFEFDLEGRTAYLYSLVVLFLVFGGLRRL 198

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R+    + R I+   K   ++   +    ++AF VS+A  G+AG   A +   +  D  
Sbjct: 199 VRSPFGLSLRGIQQGPKRMPAIGANVRMRLVAAFTVSAAIAGVAGGLLAQTTQFVGLDSL 258

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            FS +  ++ +++LGG   L       A+ +   ++  G+N               +   
Sbjct: 259 GFSRSAELLIMLVLGGAGRLYGALIGAAVFMIAQDVLAGIN--------------PVYWQ 304

Query: 322 TLMVIALFLVILMRSHSLLR 341
             + + L +++L     +L 
Sbjct: 305 FWIGLLLMVIVLFARGGILG 324


>gi|170743764|ref|YP_001772419.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168198038|gb|ACA19985.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 348

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 63/321 (19%), Positives = 119/321 (37%), Gaps = 35/321 (10%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-------- 85
            +  Y+ +  I   I  + A  L++++G  G LSL  +  + IGAY   +          
Sbjct: 21  GADPYLLNALITTGILTIGAMSLNLLLGYTGQLSLGHIAFFGIGAYVSALTSLGFDVEVG 80

Query: 86  -----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                            V+   +GACG ++G  S + RG Y  I T+  +E+ + + + W
Sbjct: 81  FGYRVMHEPWPAAAGFLVAVAAAGACGYLIGRLSFRVRGAYFVIVTISFAEVVRLVALNW 140

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G   +                       +  +  ++  YY++LG+  L  +II  
Sbjct: 141 VELTQGPLALTGIPAFTLGVP---------GLGAWTLRTKLQNYYLVLGVGALCYAIIAR 191

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           + R     A R +++N+    S+          A  VS+A  G AG+ +A     I PD+
Sbjct: 192 MVRARFGRAMRGLKENEPLALSVGINATRTLTVAAVVSAAMAGAAGSLYAHYLRIIDPDV 251

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F F+  + ++ +V+ GG  +L        I   +                          
Sbjct: 252 FLFATTVTMVIMVVGGGKGTLMGPVVGGLIFGLLPVALR-------------PVMAPEAQ 298

Query: 321 TTLMVIALFLVILMRSHSLLR 341
             +  I L L++ +    ++ 
Sbjct: 299 WIVYGIVLILILFLMPRGIVP 319


>gi|27378937|ref|NP_770466.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27352087|dbj|BAC49091.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 629

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 56/333 (16%), Positives = 120/333 (36%), Gaps = 33/333 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
                 L+        +  Y  ++G +I I+V+FA  L  ++   GL S      + +GA
Sbjct: 312 LAALATLVIAATLPLFAGNYALTVGSEIAIFVIFAVSLHFLMSVGGLASFGHAAYFGLGA 371

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y    L    GL + + + +  ++      + G  +++  G Y A+ TL  ++I  +I  
Sbjct: 372 YGIAFLAKMAGLPMIVCLLLGPLLGCMGAAVFGFFAVQLSGVYFAMLTLAFAQIVWSIAF 431

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +W  +T G  GI       +                         Y++ LG+  L    +
Sbjct: 432 QWVSVTGGDNGILGVWPEKW------------------AASPSHFYWLALGVAALVTVAL 473

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +  +    A R  RD+     ++       + +AF ++    G+ GA FA  +  + P
Sbjct: 474 RAMVFSPFGYALRATRDSLLRSEAIGINAKRIQWTAFVIAGTTAGIGGALFAYLKGSVFP 533

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           D    S ++  + +V+LGG+ ++S       +   +                        
Sbjct: 534 DNLGISLSVDALVMVLLGGVETVSGAVIGAIVYKALNIWLVSQ---------------TD 578

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               ++   + L++++    ++ +        R
Sbjct: 579 LSKLVLGGFIVLIVVVFPKGIVGMLEMLAQRRR 611



 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 92/311 (29%), Gaps = 28/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--SRYGLSIWLLI 96
             +         + A GLSI+ G   +++      Y IGAY    L          W  I
Sbjct: 8   FLTGLASAASLFLVASGLSIIFGVTRIVNFAHGAFYMIGAYIAFTLTERLSGAFGFWGSI 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +A+     G+I+ +  L+       +  L+ +     ++     +  G          
Sbjct: 68  VAAALAVALIGVIVEMVLLRRIYHAPELFQLLATFGLTLMVEDLVVLIWGPD-------- 119

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                  R+                +  +++     +   + L  +RT      R    +
Sbjct: 120 --DLVGRRAPGFKGAIDFFGQNIPSYDLFLIGLGPVVLGILWLLFQRTRWGVLVRAATQD 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +    +L     +   S FAV      + GA                   + V  +V++G
Sbjct: 178 RDMVAALGVNQKWLFTSVFAVGVFLAALGGALQIPRDAV--HHAMDLRIIVEVFVVVVIG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+     A  ++  +      +              F      L+ + + +V+++R 
Sbjct: 236 GLGSIVGAFVAAVLVSELNAFGILI--------------FPKISIILVFLVMAVVLIVRP 281

Query: 337 HSLLRLRTPSN 347
             L      + 
Sbjct: 282 WGLFGKPEAAA 292


>gi|91974534|ref|YP_567193.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91680990|gb|ABE37292.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 346

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 63/339 (18%), Positives = 129/339 (38%), Gaps = 32/339 (9%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           ++ S    +   I   + ++    +  +L          ++  ++LI  +FA   +I++G
Sbjct: 3   ALISNPTARRTPIRMFVGLLALFAVLPWLLTAIGLG--VNLATEVLIIALFAMSYNILLG 60

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           + GL S      +  GAY+  IL       I + +  +        + +GL   K RG Y
Sbjct: 61  TTGLASFGHAAFFGSGAYAVGILQRYGLNGIVISLAAAIAAGLVASLFVGLLVRKKRGIY 120

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
             + TL   ++F  + ++W  +T G+ G+    R    G  + S               I
Sbjct: 121 FGLLTLSFGQMFYIVALRWDELTGGETGLTGLKRPAPFGLDLSSH--------------I 166

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             YY  L +  ++  +I  +  +   +    I+ N+     L       KL+A  +S +F
Sbjct: 167 NFYYFTLAIFMVALWLIWRITNSPFGSLLTAIKSNEVRTQYLGYDTALYKLAAIVISGSF 226

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVIL-GGMTSLSKIAKATAILIGVVELCCG 300
            G+AG  +A  +    P    + E+  ++ + +L GG++S        A+ +G  +L  G
Sbjct: 227 SGLAGGLYAWFQYAAYPQNLFWIESGNIVILTLLGGGLSSFFGPILGAAVFVGAQDLISG 286

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
              ++                    +   +V+    + L
Sbjct: 287 YTQHW---------------MFFFGLIFIVVVTTFPNGL 310


>gi|134280281|ref|ZP_01766992.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|134248288|gb|EBA48371.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
          Length = 540

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +              
Sbjct: 266 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 325

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 326 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 383

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 384 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 443

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  +     V+LGG+  ++        L  V + 
Sbjct: 444 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 501

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 502 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 539


>gi|170699825|ref|ZP_02890857.1| urea ABC transporter, permease protein UrtB [Burkholderia ambifaria
           IOP40-10]
 gi|170135277|gb|EDT03573.1| urea ABC transporter, permease protein UrtB [Burkholderia ambifaria
           IOP40-10]
          Length = 539

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +              +++     +        
Sbjct: 265 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRHAPAAFDWYPLVAVPVSFVAAALVGIV 324

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 325 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVAVMQNL 382

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 383 ILPYNRLAILAFALAVVFVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 442

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          +  I     V+LGG+  ++        L  V + 
Sbjct: 443 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKT 500

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +   +  S  
Sbjct: 501 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAPKGRSAE 538


>gi|73537841|ref|YP_298208.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72121178|gb|AAZ63364.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 352

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 58/307 (18%), Positives = 115/307 (37%), Gaps = 12/307 (3%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L   L + A  +      +G QILI  +FA  L +++G  G++SL     + +GAY+  
Sbjct: 38  FLFWLLPVAAFFALPDYLILGSQILISGLFALSLDLILGYAGIVSLGHAAFFGLGAYTAG 97

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +L +         +  +A ++   G +     ++       + TL +  +      K   
Sbjct: 98  LLAAHGWGEPLSGLLAAAAMAAVAGWLCSFLVVRGGDLTRLMVTLGIGLMLFEAANKAAF 157

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+        LG               F +     Y   L   F    ++  L 
Sbjct: 158 VTGGVDGLSGVAMDRLLGV------------FEFDLIGKTAYVYSLAATFALFLLLRRLT 205

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           ++    + R IR+  +   +L   +     + F +S+A  G+AGA  A +   +  D+  
Sbjct: 206 QSPFGLSLRGIREGGRRMPALGADVPRRLRTTFTLSAAIAGVAGALLAQTTQFVGMDVLG 265

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  +  ++ +++LGG   L       A+ +   ++  GMN  Y+   +       +    
Sbjct: 266 FPRSAELLVMLVLGGTGRLYGALAGAALYMIAQDVLAGMNPVYWQFWIGLLLVLVVLFAR 325

Query: 323 LMVIALF 329
             V+   
Sbjct: 326 GGVMGAM 332


>gi|332799688|ref|YP_004461187.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp.
           Re1]
 gi|332697423|gb|AEE91880.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter
           sp. Re1]
          Length = 324

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 68/292 (23%), Positives = 127/292 (43%), Gaps = 20/292 (6%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               + +Y   +  + +   +   GL I+ G  G+LS+      A+GAY+Y IL  ++GL
Sbjct: 23  APHITSQYEFYVVQRGVQNAIHVVGLLILTGYGGMLSMGSAALLAVGAYAYGILLVKFGL 82

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S WL + ++  ++   G  +  PS K  G +L I T+   EI + +L+  +PIT G  G+
Sbjct: 83  SPWLGMILATALTTIIGTGLAFPSFKLSGPFLVITTIGFGEIVRILLLNLEPITGGAYGL 142

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               +L+                         +YY ++            + R+ +  A 
Sbjct: 143 SGFAKLFPNVQW--------------------VYYFMVITLIFVIIGTERIGRSRLGLAL 182

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           + IR ++    S+   +  AKL AF++S+   G++G F A     +SPD F  +E+   +
Sbjct: 183 KAIRQDEVVAESMGIDVRRAKLVAFSLSAMLAGLSGVFLANLTGYMSPDSFTSAESTTYL 242

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            +V++GGM S+     +  IL G+ E+   ++             +   +  
Sbjct: 243 LMVVMGGMQSVIGTVISAIILTGLPEVLRFLSSSRLLVYSLILLIYLRLNWV 294


>gi|264680646|ref|YP_003280556.1| UrtA [Comamonas testosteroni CNB-2]
 gi|262211162|gb|ACY35260.1| UrtA [Comamonas testosteroni CNB-2]
          Length = 537

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 88/291 (30%), Gaps = 16/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++   +   +        ++       +    +  
Sbjct: 262 ITYGLMGVINMAHGELIMIGAYATYLVQLLFQRWLPEAWFGGYLVVAIPVAFLASALVGA 321

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
             +   I  L      + +L  +      +  +        +       +         +
Sbjct: 322 VLERGVIRFL-YGRPLETLLATFGISLVLQQTVRSLFGAQNVSVENPVWMSGGIALLPNL 380

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                   +++    + A +   + RT +    R +  N+     +          AFA+
Sbjct: 381 TLPYNRIAIIVFAFAVLAGVAFMIARTRLGLFVRGVTQNRAMASCVGVNTARTDTYAFAL 440

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG   A S+          +  +    +V+LGG+  L+    A   L  + +L
Sbjct: 441 GSGIAGLAGC--ALSQIGNVGPDLGQNYIVDSFLVVVLGGVGQLAGTVYAALGLGVLSKL 498

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             G                       +++ + + I  R   +  L+  S  
Sbjct: 499 LEGWTGAVLAK-------------IAVLLFIVVFIQKRPQGIFALKGRSAE 536


>gi|126664339|ref|ZP_01735323.1| inner-membrane translocator [Marinobacter sp. ELB17]
 gi|126630665|gb|EBA01279.1| inner-membrane translocator [Marinobacter sp. ELB17]
          Length = 315

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 65/331 (19%), Positives = 130/331 (39%), Gaps = 26/331 (7%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            KI  L A++  ++  L      +  +   +  +ILI  +FA   +++ G  G+LS    
Sbjct: 1   MKIKILWALLTLVIAGLIAVPWIASYFYIFIFTEILILGLFAASFNLIFGYTGMLSFGHA 60

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             + IG+Y+  ++         + + VS  +S    +I+G   ++    Y A+ TL    
Sbjct: 61  AFFGIGSYAMALVLIYLEWPFVVGLLVSMGVSALLALIIGFFCVRLNEVYFAMLTLAFGM 120

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +   I  +W+ +TNG  G               SL  F       +      Y+V+L + 
Sbjct: 121 MVFAIAYQWRSVTNGSDG-----------LAGFSLGSFGLGLDLTLANPAVYYHVVLAIV 169

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            ++++++  + R++     R IR N +        +   +L AF ++ +F G+AG   A 
Sbjct: 170 VIASAVLYLVCRSSFGMILRAIRQNPERVSFAGLNVRTYRLVAFVIAGSFAGLAGGLIAP 229

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                SP++  +S +   I + ILGG          +A+ + +          +      
Sbjct: 230 FLRVASPELLHWSMSAEPILMAILGGTGYFLGPFVGSAVFVLLETWITSFTESW------ 283

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                      ++ I L L+++     LL  
Sbjct: 284 ---------MLVLGIILALMVIFFRKGLLGT 305


>gi|254459501|ref|ZP_05072917.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2083]
 gi|206676090|gb|EDZ40577.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 368

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 71/317 (22%), Positives = 124/317 (39%), Gaps = 14/317 (4%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
                       Y+      ILI  +   GL ++ G  GL SL      A G Y   I  
Sbjct: 34  ATPLYFVAIGDAYLLGEITGILILAIAGMGLMLLTGHTGLPSLGHATFMAFGCYIN-INM 92

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
              G+   +  P+S +I+G  G ++ LP L+  G YLA+ATL MS +  + ++  +P T 
Sbjct: 93  LGAGVPWVIAFPLSGLIAGVLGTMIALPVLRLHGVYLALATLAMSMLTSDFVVIAEPWTG 152

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G AG  V D            I  F    +        YY++L +  L       L RT 
Sbjct: 153 GIAGAAVPD------------INIFGMEINRYSTPYKFYYLVLFVAILLVWFYRNLLRTP 200

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
              ++  IRD++ +  ++   +   K  +F +S+   G+AGA F  S   ++ + F    
Sbjct: 201 TGRSFTAIRDSEISARAMGINLTRTKAMSFFLSATAAGLAGALFGHSAGYVTNETFDLVM 260

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           +I ++ ++++GG+  +        ++  +          +  S    + +     + L  
Sbjct: 261 SITLLLMIVIGGLGFIHGAFFGAIVVGIIPVAIAN-GRSFLQSTFDMNVNVPGLESALFA 319

Query: 326 IALFLVILMRSHSLLRL 342
             L   IL     L   
Sbjct: 320 FILICFILFEPMGLYGR 336


>gi|167920133|ref|ZP_02507224.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia pseudomallei BCC215]
          Length = 519

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +              
Sbjct: 245 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 304

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 305 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 362

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 363 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 422

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  +     V+LGG+  ++        L  V + 
Sbjct: 423 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 480

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 481 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 518


>gi|254251637|ref|ZP_04944955.1| branched-chain amino acid ABC transporter permease protein
           [Burkholderia dolosa AUO158]
 gi|124894246|gb|EAY68126.1| branched-chain amino acid ABC transporter permease protein
           [Burkholderia dolosa AUO158]
          Length = 316

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 98/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           I +  +   +Y + A G ++V G LG+++        IGA   +   +            
Sbjct: 8   ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPELGNV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +   I+      +G    +     L  A  +   I    +                
Sbjct: 68  ATLTIGLGIAAIVCAFVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    ++     + A ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFIVMAGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            ++      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|167895523|ref|ZP_02482925.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia pseudomallei 7894]
          Length = 497

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +              
Sbjct: 223 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 282

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 283 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 340

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 341 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 400

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  +     V+LGG+  ++        L  V + 
Sbjct: 401 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 458

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 459 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 496


>gi|158187222|gb|ABW22842.1| putative inner-membrane translocator [Burkholderia sp. NCIMB 10467]
          Length = 356

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 105/301 (34%), Gaps = 11/301 (3%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            L  +   + + L       +      +      + ++  Q  I  + A  +  ++   G
Sbjct: 32  PLPRSASKRTIPLAIAFVLAVAGAVAPSLIQSTLVFTLLTQATITAILATSVGFLIRQNG 91

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           L+S      Y +  Y   +    +  S    I ++ +I       +G+  ++  G   ++
Sbjct: 92  LVSFGHAAFYGLAGYIIALSMRGHITSPEAAIGLAVLIPTLLAFGLGMVFIRMVGVAFSM 151

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL +++ F  + ++W+ + NG+ G+ V                     +        ++
Sbjct: 152 LTLAVAQGFYELFMRWRSLANGEDGLRVDWPTSIF-----------GVHTVMFQDAGTIF 200

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
                +  L    +  L  +        IR+N++    +    +      +A+S+    +
Sbjct: 201 LACWFVLVLVVFGLYVLASSHFGTLTLAIRENEERVRFIGYATVVPHALVYAISAFIASL 260

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG  FA      +PD+  +S +  V+ + I+GG  S+   A        +      +  +
Sbjct: 261 AGVLFALYNGFFTPDILNWSLSGEVMIMAIIGGTRSVWGPALGAVFFFFLKNFLGDVTDH 320

Query: 305 Y 305
           +
Sbjct: 321 W 321


>gi|110677926|ref|YP_680933.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
 gi|109454042|gb|ABG30247.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
          Length = 326

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 54/310 (17%), Positives = 109/310 (35%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+  L           + +  ++  + +I+ + A GL+I +G  GL+SL   + + +G 
Sbjct: 9   VVLIGLCAVPIWALLVDEPFTITLATRAVIFALAAVGLNIALGWGGLVSLGHAVFFGLGG 68

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL         ++     +       ++ L ++   G    +  L+         I
Sbjct: 69  YAMGILAHHAQTFTPVMEWPFLIEGTKSMPVIWLVAMISAGVAALVIGLLSLRTAGVYFI 128

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                       +      + G    S+     FP    +  I  + +   +  +   I 
Sbjct: 129 MITLAFGQMFYYFAISWAEYGGEDGLSIYVRNDFPGLNTLVPIHFFALCFVILCIVLFIN 188

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++    A    R       ++    +  KL AF +S    G+AGA FA     +SP
Sbjct: 189 ARLIKSPFGLALNAARQVPTRVETVGMDPVRLKLVAFVISGVITGLAGALFADLNRFVSP 248

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            MF +  +  ++  VILGG+  L        + + +     G++ Y+   L        +
Sbjct: 249 TMFSWQMSGEIMIFVILGGVARLFGPVVGAVLFVVLEHFLGGLSNYWHIYLGLLLLIIVL 308

Query: 319 RHTTLMVIAL 328
                ++  L
Sbjct: 309 FARGGIIGLL 318


>gi|302545280|ref|ZP_07297622.1| ribose ABC transporter, permease [Streptomyces hygroscopicus ATCC
           53653]
 gi|302462898|gb|EFL25991.1| ribose ABC transporter, permease [Streptomyces himastatinicus ATCC
           53653]
          Length = 649

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 52/310 (16%), Positives = 102/310 (32%), Gaps = 27/310 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             V+  + + L  G   +   + ++G+Q  +  + A+G++ V+ S G + L+     A+ 
Sbjct: 30  ALVLLVVAMSLLSGDFLTTDNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVAALS 88

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A       +  GL +WL   ++     ACG++ G      +      ATL M  + + + 
Sbjct: 89  ATVLAWSATSQGLPVWLAALLAVATGVACGLVSGALVSFGKLPPFI-ATLAMLSVGRGLA 147

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    + +    +               ++   +L M  +    
Sbjct: 148 L--------------------VISQGSPISVPDSVSGLGDTLGGWLPVPVLVMVAMGLIT 187

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L RT    A   I  N++A       +   KL  +A+S  F  +AG   A+      
Sbjct: 188 SGLLGRTYAGRAMYAIGGNEEAARLSGIRVGRQKLVIYALSGGFAAIAGIVLASRLSSAQ 247

Query: 258 PDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           P      E   + ++VI      GG+   S       IL  +      +    F   +  
Sbjct: 248 PQAAVGYELDAIAAVVIGGASLSGGVGKASGTLIGALILAVLRNGLNLLEVSAFWQQVVI 307

Query: 313 DCSFNMRHTT 322
                +    
Sbjct: 308 GVVIALAVLL 317


>gi|221201128|ref|ZP_03574168.1| urea ABC transporter, permease protein UrtB [Burkholderia
           multivorans CGD2M]
 gi|221206419|ref|ZP_03579432.1| urea ABC transporter, permease protein UrtB [Burkholderia
           multivorans CGD2]
 gi|221173728|gb|EEE06162.1| urea ABC transporter, permease protein UrtB [Burkholderia
           multivorans CGD2]
 gi|221178978|gb|EEE11385.1| urea ABC transporter, permease protein UrtB [Burkholderia
           multivorans CGD2M]
          Length = 571

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +              +++              
Sbjct: 297 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRHAPAAFDWYPLVAVPASFAAAALVGIV 356

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 357 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 414

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 415 ILPYNRLAILAFALAVVGVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 474

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          +  I     V+LGG+  ++     +  L  V + 
Sbjct: 475 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGSFGLGLVGKA 532

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +   +  S  
Sbjct: 533 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAAKGRSAE 570


>gi|124384095|ref|YP_001028522.1| putative amino acid ABC transporter, permease protein [Burkholderia
           mallei NCTC 10229]
 gi|124292115|gb|ABN01384.1| urea ABC transporter, permease protein UrtB [Burkholderia mallei
           NCTC 10229]
          Length = 540

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 79/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +              
Sbjct: 266 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 325

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         + +      +     S +         +
Sbjct: 326 LER--TVLRHLYGRPLETLLATFGVSLILIQAMRMIFGAQNVQVVNPSWMSGGVTVMQNL 383

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 384 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 443

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  +     V+LGG+  ++        L  V + 
Sbjct: 444 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 501

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 502 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 539


>gi|323528596|ref|YP_004230748.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
 gi|323385598|gb|ADX57688.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
          Length = 648

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 57/284 (20%), Positives = 126/284 (44%), Gaps = 18/284 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+  + ++ILI V+FA  L  ++G  G+ S      + +GAY   +      L +   +
Sbjct: 344 PYMPVLLVEILIAVLFATSLHFIMGPGGMHSFGHAAYFGLGAYGAALFLKVLNLPMEAAL 403

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ +++    ++ G   ++  G YLA+ TL  ++I  +++ +W  +T G  GI      
Sbjct: 404 LLAPLLAVGGALVFGWFCVRLSGVYLAMLTLAFAQIVWSVVFQWDDVTGGSNGI------ 457

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                          +P+ ++   +  YY+ L    L   ++  +  + +  A R  RD+
Sbjct: 458 ------------LGLWPADWLSSPVAFYYLTLACAVLGVWLLRRMLFSPLGYAMRASRDS 505

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                ++   +   + ++F ++S F G+AG+ +A S+  ISP++   S ++  + +V+LG
Sbjct: 506 VLRAEAIGIDVKRVQWASFVIASLFCGLAGSLYAFSKGTISPEVISVSRSVDGLVMVLLG 565

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           G+ +L+      A+   + +       Y+   L        +  
Sbjct: 566 GLQTLTGPIVGAAVFTWLQDTVARQTDYWQALLGLAILLLVIAF 609



 Score = 66.0 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 93/307 (30%), Gaps = 18/307 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95
           + +         + A GLS++ G   +++      Y  G   AYS            WL 
Sbjct: 9   LVNGLADASTLFLVAAGLSLIFGVTRIVNFAHGSFYMFGIYIAYSIASRFGHTAGGFWLS 68

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  +A+I    G ++ +  L+       +  L+ +     I         G   ++    
Sbjct: 69  VLAAALIVAVLGALVEVVVLRRIYQAPELFHLLATFALVLIFRDAALWLWGPEDLFGPRA 128

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                     +   +++    +   +   L RT      R    
Sbjct: 129 P----------HLAGAVDFLGHPLPTYDIALIVIGPVVLLLLWYALTRTRWGTLVRAATQ 178

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++   +L     +     F V +   G+ GA                        +V++
Sbjct: 179 DREMLGALGINQAWLFTGVFFVGAFLAGLGGALQGPRMSA--NLSLDLETIGNAFVVVVV 236

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S+     A  I+  +  LC G+      S+     S +        + + +V+++R
Sbjct: 237 GGMGSIPGAFVAALIIAEIKALCIGIGH---VSIFGVGLSLSRFTLVAEFVVMAVVLVVR 293

Query: 336 SHSLLRL 342
              LL  
Sbjct: 294 PWGLLGR 300


>gi|163856030|ref|YP_001630328.1| putative branched-chain amino acid transport permease [Bordetella
           petrii DSM 12804]
 gi|163259758|emb|CAP42059.1| putative branched-chain amino acid transport permease [Bordetella
           petrii]
          Length = 329

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 120/311 (38%), Gaps = 15/311 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             ++++ Y +FA   ++++G  GLLS          AY+       +G    L +     
Sbjct: 27  FAMKVMCYALFACAFNLLLGYTGLLSFGHAAFLGSAAYAAGHALKVWGFPTELGLIFGTA 86

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           ++   G+++GL +++  G Y A+ TL ++++     ++    T G+ G+    R      
Sbjct: 87  VAALLGLVIGLLAIRRSGIYFAMITLALAQMVFFFFLQA-HFTGGEDGLQRVPRGT---- 141

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                          +  ++ +YY+++ +  +   ++     +      + +R+N+    
Sbjct: 142 ---------LLGFIDLRNDLNLYYLVMAIFAIGYFVVWRTVHSPFGQVLKALRENEPRTL 192

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   KL AF +S+A  G+AGA         +     +  + +VI + ++GG+ +L
Sbjct: 193 SLGYDVDRFKLLAFVLSAAIAGLAGATKTLVFVSATLSDATWQMSGLVILMTLIGGLGTL 252

Query: 282 SKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                   I++ +         +    +   +        T ++ +   + +L     ++
Sbjct: 253 VGPILGAFIVVLLENKVGDFGRFMADLTGSSWFLRLGESVTIVIGLIFIICVLAFRRGIV 312

Query: 341 RLRTPSNFLER 351
                     R
Sbjct: 313 GEWLAFMERRR 323


>gi|126449653|ref|YP_001081580.1| putative amino acid ABC transporter, permease protein [Burkholderia
           mallei NCTC 10247]
 gi|254356321|ref|ZP_04972597.1| putative amino acid ABC transporter, permease protein [Burkholderia
           mallei 2002721280]
 gi|126242523|gb|ABO05616.1| urea ABC transporter, permease protein UrtB [Burkholderia mallei
           NCTC 10247]
 gi|148025318|gb|EDK83472.1| putative amino acid ABC transporter, permease protein [Burkholderia
           mallei 2002721280]
          Length = 538

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 79/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +              
Sbjct: 264 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 323

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         + +      +     S +         +
Sbjct: 324 LER--TVLRHLYGRPLETLLATFGVSLILIQAMRMIFGAQNVQVVNPSWMSGGVTVMQNL 381

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 382 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 441

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  +     V+LGG+  ++        L  V + 
Sbjct: 442 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 499

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 500 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 537


>gi|327384290|gb|AEA55764.1| Branched chain amino acid transport permease [Lactobacillus casei
           BD-II]
          Length = 269

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 73/302 (24%), Positives = 128/302 (42%), Gaps = 43/302 (14%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--YGLSIWLLIPVSAMISGACGMI 109
            A GL++++G  G  SL      AIGAY+  I+       L  +L + V  +++    +I
Sbjct: 1   MAVGLNLIIGFSGQFSLGHAGFMAIGAYATAIITQNISTPLGFYLAMLVGMIVAIIAALI 60

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           +G+P+L+ RGDYLAIAT+  +EI + I+     ITNG AG++    L    T        
Sbjct: 61  VGIPTLRLRGDYLAIATMGAAEIIRVIINNL-KITNGPAGMFNIPPLASWPT-------- 111

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                            +  +  ++  I++    +    A   IRD+  A  S+      
Sbjct: 112 -----------------VYILMCVTTVIVVNFIHSRAGRAVMAIRDDDIAAESIGINPTK 154

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            KL+AF + +A   + G+  A+    I+P  F    +I ++ IV+LGG+ S++    A  
Sbjct: 155 WKLAAFVLGAATAAIGGSLHASYLQTIAPGDFGIMNSIALLIIVVLGGVGSITGTFVAAV 214

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
           +L  +  +                         +  +AL L+++ +   LL     S   
Sbjct: 215 VLGIIDTVLQNF---------------GTLRMVIYALALILLMVFKPAGLLGHYELSFKR 259

Query: 350 ER 351
           +R
Sbjct: 260 KR 261


>gi|152981704|ref|YP_001352348.1| ABC-type branched-chain amino acid transport system, permease
           component [Janthinobacterium sp. Marseille]
 gi|151281781|gb|ABR90191.1| ABC-type branched-chain amino acid transport system, permease
           component [Janthinobacterium sp. Marseille]
          Length = 387

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 71/336 (21%), Positives = 139/336 (41%), Gaps = 20/336 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  +   L L   + A     ++  M   +L+Y     GL++  G +G+ +      + 
Sbjct: 70  GLARIWMVLGLLALVAAFYDSHFVLMMICAVLLYSTACMGLTLQFGFVGVANFAGAAFFG 129

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IG+Y+  +L +  GL     I +S +++   G ++ LP L+ RG Y A+ T+    I   
Sbjct: 130 IGSYTTAVLATHTGLPQLANIAISGVVAAIIGSVLILPVLRTRGHYAALVTIAF-GILFK 188

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             I+   +  G  G+ V     F          F         + +    + L +C  + 
Sbjct: 189 TFIEVNDVLGGPQGLQVPGMQLFGHAFNEGFTLF----GIEFSFYVSYVLLSLVICAGAF 244

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++  L R+ +  +   +R ++ A  +    I   K+ AF + + F G+AG+ +      
Sbjct: 245 VLVKALERSWVGLSMDVVRTDETAAATFGLHIARWKVIAFTMGNLFAGIAGSVYGMMVGF 304

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           I+P+ F FS++++++SI ILGG+ +   +  A  I++ + E    +  Y           
Sbjct: 305 IAPNNFTFSDSLLLVSIAILGGLGNPVGLIPAAIIVLMLPEKLQFIQEY----------- 353

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                  L    +  ++L R   LL  +T   F  +
Sbjct: 354 ----RVLLYAALVIAILLFRPEGLLPRKTRLFFSRK 385


>gi|76810651|ref|YP_334500.1| branched-chain amino acid ABC transporter permease [Burkholderia
           pseudomallei 1710b]
 gi|254180950|ref|ZP_04887548.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|254196025|ref|ZP_04902450.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|254261462|ref|ZP_04952516.1| urea ABC transporter, permease protein UrtB [Burkholderia
           pseudomallei 1710a]
 gi|254298937|ref|ZP_04966387.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|76580104|gb|ABA49579.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia pseudomallei 1710b]
 gi|157809258|gb|EDO86428.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|169652769|gb|EDS85462.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|184211489|gb|EDU08532.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|254220151|gb|EET09535.1| urea ABC transporter, permease protein UrtB [Burkholderia
           pseudomallei 1710a]
          Length = 542

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +              
Sbjct: 268 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 327

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 328 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 385

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 386 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 445

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  +     V+LGG+  ++        L  V + 
Sbjct: 446 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 503

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 504 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 541


>gi|310659506|ref|YP_003937227.1| inner-membrane translocator [Clostridium sticklandii DSM 519]
 gi|308826284|emb|CBH22322.1| Inner-membrane translocator precursor [Clostridium sticklandii]
          Length = 288

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 56/308 (18%), Positives = 118/308 (38%), Gaps = 41/308 (13%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+  + I   I ++   GLS++ G  GL S       AIGAY   ++  + GL     +
Sbjct: 4   YYVQGILILAGINLLTVLGLSLLTGFTGLFSFGHAGFMAIGAYMTTMMTVKLGLPFIPAL 63

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V  + +    +I+G  +L  +GDY  IATL   E  + IL   +    G  G       
Sbjct: 64  LVGGLSAALISLIIGKFTLNLKGDYFCIATLGFGEAIRLILDNIQYF-GGSRGWAGIP-- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                      ++ ++ +  ++  +++++  +      + IR+ 
Sbjct: 121 -----------------------LYTTFWNVMIIDVVAIIVMVFIINSRHGRNMKAIREE 157

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +   K+++  +S+ + G+AG   A     + P MF+  ++  +  IVI G
Sbjct: 158 ELASQIVGIDVFRYKMTSLGISALYAGVAGGMLAHYLGYLQPLMFQMVKSTELTIIVIFG 217

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S++       +L  + E+                         +  +A+  +++ R 
Sbjct: 218 GLGSITGSVIGAILLTALPEILRDFY---------------QWRLVIYGLAVIAIMISRP 262

Query: 337 HSLLRLRT 344
             L+  + 
Sbjct: 263 RGLMGGKE 270


>gi|254503685|ref|ZP_05115836.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222439756|gb|EEE46435.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 410

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/337 (14%), Positives = 95/337 (28%), Gaps = 33/337 (9%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           LL           Y  ++  + L Y + A  + +V G  G+LSL     +A+G Y+  + 
Sbjct: 33  LLVPESSPFHVPTYAVALMGKYLTYALLALSVDLVWGFCGILSLGHAAFFALGGYAMGMY 92

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
             R   S  +                 LP   +  D    A L++  +   +   +    
Sbjct: 93  LMRQIGSRGVYGDPILPDFMVFLNWDVLPWFWYGFDMFWFAALMVVLVPGALAFVFGWFA 152

Query: 145 NGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                                    +  D  +     +        F          ++ 
Sbjct: 153 FRSRVTGVYLSIITQALTYALLLAFFRNDMGFGGNNGLTDFKDILGFDIQADTTRAALFA 212

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
                  L   I   + R+ +      +RD +     L   +   KL  + +S+   G+A
Sbjct: 213 ASGIALGLCYIICRAITRSKLGKVLVAVRDAESRTRFLGYRVEHYKLFVWTISAMMAGIA 272

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA +      I+P  F  + +I V+  V +GG  +L        ++              
Sbjct: 273 GALYVPQVGIINPGEFAPANSIEVVIWVAVGGRGTLVGAILGAVLVNFAKTW-------- 324

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 F           +     +V L     ++  
Sbjct: 325 ------FTAVLPDIWLFALGGLFVVVTLFLPKGIVGT 355


>gi|167842030|ref|ZP_02468714.1| inner-membrane translocator [Burkholderia thailandensis MSMB43]
          Length = 603

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 70/312 (22%), Positives = 123/312 (39%), Gaps = 33/312 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +  Y+        +Y + A  L++V G++G +SL       IGAY+  +L S  G 
Sbjct: 324 PWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGAYASALLSSDLGW 383

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S  + IP +  I+   G ++  P+ + RG Y++IATL + E+   +++ W  +T G  GI
Sbjct: 384 SPAVTIPCAGAITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVILNWDGLTRGPLGI 443

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                L +                         Y+    +    A + + L R+ +    
Sbjct: 444 AGIAPLPW------------------ATTARAAYWFTFAVLVAFALVQVRLLRSHLGRTL 485

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +R++  A  +        K  AFAV     G++G   A     I+   F    +I+ +
Sbjct: 486 RAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINHQTFDSQVSILAL 545

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           ++VILGG+ ++         LIG+ EL      Y                  +  + L L
Sbjct: 546 TMVILGGLGNVLGGIAGALALIGLPELFRWAADY---------------RMLIYGLVLLL 590

Query: 331 VILMRSHSLLRL 342
           ++  R   LL  
Sbjct: 591 LVRFRPQGLLGT 602



 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/305 (16%), Positives = 102/305 (33%), Gaps = 25/305 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  I   IY + A GL+++ G   L++      Y +GA+   +  +R GL + + +
Sbjct: 6   DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRCGLPLPVAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                  GA G+ +    L+       IA L+ +     IL +   +  G     V   L
Sbjct: 66  AAVVAGCGALGIAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             +          +       +A +  +LR T +  A R    +
Sbjct: 126 PDWH-----------LRIAGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +     + FA++ A  G++G       + I P M  F   +  +  +++G
Sbjct: 175 RDAALQMGVDVNRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++      + +L  V      +                          L + ++ R 
Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFG-------------TSYRDLFAFALLIVFLVWRP 280

Query: 337 HSLLR 341
           + L  
Sbjct: 281 NGLFS 285


>gi|221213755|ref|ZP_03586729.1| urea ABC transporter, permease protein UrtB [Burkholderia
           multivorans CGD1]
 gi|221166544|gb|EED99016.1| urea ABC transporter, permease protein UrtB [Burkholderia
           multivorans CGD1]
          Length = 540

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +              +++              
Sbjct: 266 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRHAPAAFDWYPLVAVPASFAAAALVGIV 325

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 326 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 383

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 384 ILPYNRLAILAFALAVVGVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 443

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          +  I     V+LGG+  ++     +  L  V + 
Sbjct: 444 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGSFGLGLVGKA 501

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +   +  S  
Sbjct: 502 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAAKGRSAE 539


>gi|121610151|ref|YP_997958.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121554791|gb|ABM58940.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 527

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 90/310 (29%), Gaps = 17/310 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      I ++ A GL+I  G +G++++       IGAY+   +   +   +      
Sbjct: 235 LFSGISLGSILLLVALGLAITYGLMGVINMAHGELMMIGAYATFAVQGVFRQYLPAAFDW 294

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +                    +   +     + +L  W         +        
Sbjct: 295 YLVAALPLAFAASALVGAVLER--GVLRFLYGRPLETLLATWGISLVLMQLVRTLFGAQN 352

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G    + +         +        ++     +   +   + RT +    R +  N+ 
Sbjct: 353 VGVENPAWMSGGVQLLPNLTLPYNRLVIIGFALAVLLGMGWIIARTRLGLWVRGVTQNRP 412

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +          AFA+ S   G+AG   A S+          +  +    +V+LGG+
Sbjct: 413 IAACMGVNTARIDTLAFALGSGIAGLAGC--ALSQVGNVGPDLGQNYIVDAFMVVVLGGV 470

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L+    A   L  + +   G                       +++ + + I  R   
Sbjct: 471 GQLAGTVYAALGLGVLGKFLEGWAGAVLAK-------------IAVLVFIIIFIQKRPQG 517

Query: 339 LLRLRTPSNF 348
           +   +  S  
Sbjct: 518 IFAAKGRSFE 527


>gi|237813472|ref|YP_002897923.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia pseudomallei MSHR346]
 gi|237504718|gb|ACQ97036.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia pseudomallei MSHR346]
          Length = 540

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +              
Sbjct: 266 ITYGLIGVINMAHGEFLMIGAYATYVVQTFVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 325

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 326 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 383

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 384 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 443

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  +     V+LGG+  ++        L  V + 
Sbjct: 444 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 501

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 502 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 539


>gi|167563794|ref|ZP_02356710.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia oklahomensis EO147]
          Length = 538

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/291 (12%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +              + +     +        
Sbjct: 264 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYAPGAFDWYPLAAIPASFLAAAAVGIV 323

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 324 LER--TVLKHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 381

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 382 ILPYNRLAILAFALAVVGVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 441

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  ++        L  V + 
Sbjct: 442 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 499

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 500 VEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 537


>gi|260893335|ref|YP_003239432.1| inner-membrane translocator [Ammonifex degensii KC4]
 gi|260865476|gb|ACX52582.1| inner-membrane translocator [Ammonifex degensii KC4]
          Length = 307

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 70/306 (22%), Positives = 121/306 (39%), Gaps = 21/306 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+    I I I+ + +  L++  G  GL +   V  +  GAY+Y +L       ++L  
Sbjct: 5   FYLADTLIFIGIFSLLSLSLNLEFGLTGLGNFGKVAFFMAGAYAYTLLA-HAAFPVYLCF 63

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A+++G  G+I+ LP+L+ R DYLAI TL   EI + I+   + +  G  GI V    
Sbjct: 64  LGGALVAGLIGLIITLPALRLREDYLAIVTLSFGEILRTIVKAEEGLAGGVRGISVPAVF 123

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             S     +    + LG   L   ++  +  +      R IR++
Sbjct: 124 ---------------HLGSSRADALANIALTLGCLALCFLLLQAVAHSPYGRVLRAIRED 168

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  +L    +  K SA  + S   G+AG  FA   + I P MF  +   +V  ++ILG
Sbjct: 169 EVAVKALGKNPVSFKASALFIGSCIAGLAGGIFAQYLNFIDPTMFLPTVTFLVWMMLILG 228

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  +         ++  +      M        +      N        + + LV++ R 
Sbjct: 229 GAGNNWGALLGGVVVELMNRGTRIM-----KDFVALPVDPNNLQFIFFGLLVILVLIFRP 283

Query: 337 HSLLRL 342
             +L  
Sbjct: 284 QGILPE 289


>gi|331002336|ref|ZP_08325854.1| hypothetical protein HMPREF0491_00716 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330410152|gb|EGG89586.1| hypothetical protein HMPREF0491_00716 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 293

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 100/306 (32%), Gaps = 25/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G   +++        +GAY+     S  GL +   + +
Sbjct: 9   LINGLRTGSIYALIAIGYTMVYGIAKMINFAHGDIIMVGAYALYFSISVLGLPVPAALLI 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G+++   + K       +A LI +      L     +  G            
Sbjct: 69  TVIVCSVLGVLIEKIAYKPLRKAPPLAVLITAIGMSFFLQSSSLLFFGST---------- 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                +S+I         V+        L         + L++ +T + +A R + +++ 
Sbjct: 119 -PIPFQSVIPNVNIKLGPVVISSITLVTLAVTAIAMILLTLFINKTKLGSAMRAVSEDKG 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA   +AG  + +    +          I      +LGG+
Sbjct: 178 AAELMGINVNSTISMTFAIGSALAAVAGILYISQYQSM-RPTLGALPGIKAFVAAVLGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L  +  +            + F               L +V+L R   
Sbjct: 237 GSIPGAMLGGILLGLIESVSKAYISTELADAIVFG-------------VLIVVLLFRPSG 283

Query: 339 LLRLRT 344
           LL  R 
Sbjct: 284 LLGKRK 289


>gi|291549855|emb|CBL26117.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           (TC 3.A.1.4.-) [Ruminococcus torques L2-14]
          Length = 294

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/308 (15%), Positives = 107/308 (34%), Gaps = 24/308 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      +Y + A G ++V G   +L+        IGAY  +I   + GL  W+ I
Sbjct: 5   SYLVNGLSLGSVYALIALGYTMVYGIAKMLNFAHGDVIMIGAYVALITMKQAGLPTWVAI 64

Query: 97  PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
            +S +     G++M   +    R    ++A LI +     +L     +  G         
Sbjct: 65  LISIIACTVLGVLMERVAYKPLRNATSSLAVLITAIGVSYLLQNVALLIFGANAQTFPSV 124

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           + + G ++             +         ++    +  ++I ++++T    A R + +
Sbjct: 125 IKWSGLSLAD---------GKLNISGETIVTIVVCVVIMIALITFVQKTKPGQAMRAVSE 175

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A   +   +       FA+ S    +AG    ++   ++P        I      + 
Sbjct: 176 DRGAAQLMGINVNATIALTFAIGSGLAAVAGVLLCSTYPSLTPYT-GAMPGIKAFVAAVF 234

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S+        +L  +  L                         ++   L +V+L++
Sbjct: 235 GGIGSIPGAFIGGILLGIIEILSKAYISSQLADA-------------IVFAVLIIVLLVK 281

Query: 336 SHSLLRLR 343
              LL  +
Sbjct: 282 PTGLLGKK 289


>gi|207723721|ref|YP_002254119.1| transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206588925|emb|CAQ35887.1| transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 341

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 59/320 (18%), Positives = 116/320 (36%), Gaps = 27/320 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
                   L       Y+   G Q+LI  +FA  L +V+G  G++SL     + +GAY+ 
Sbjct: 32  IAFWCVPVLVFFVLPDYLV-FGSQVLIAGLFALSLDLVLGYAGIVSLGHAGFFGLGAYTA 90

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +L +         +  +A ++   G  +    ++ +     + TL +  +      K  
Sbjct: 91  GLLAAHGWGEPLSGLAAAAAVAALAGCCVSFLVVRGQDLTRLMVTLGIGLMLYEAANKMA 150

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G  G+        LG               F +     Y   L + F    ++  L
Sbjct: 151 FLTGGVDGLSGVTMEKLLGR------------FEFDLSGRTAYVYSLAVLFGLFVLLRRL 198

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R+    + R I+       +L   +    + AF VS+A  G+AG   A +   +  D  
Sbjct: 199 VRSPFGLSLRGIQQGPARMPALGADVRMRLVVAFTVSAAVAGVAGGLLAQTTQFVGLDAL 258

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            FS +  ++ +++LGG   L       A+ +   ++  G+N               +   
Sbjct: 259 GFSRSAELLIMLVLGGAGRLYGALVGAAVFMLAQDVLAGIN--------------PVYWQ 304

Query: 322 TLMVIALFLVILMRSHSLLR 341
             + + L +++L     +L 
Sbjct: 305 FWIGLLLMVIVLFARGGILG 324


>gi|194289447|ref|YP_002005354.1| branched-chain amino acid ABC transporter [Cupriavidus taiwanensis
           LMG 19424]
 gi|193223282|emb|CAQ69287.1| putative ABC-type branched-chain amino acid transport systems,
           membrane component [Cupriavidus taiwanensis LMG 19424]
          Length = 359

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 61/329 (18%), Positives = 130/329 (39%), Gaps = 26/329 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  +     L     L    S K+   +  +++I  +FA  L +++G  GL+SL     +
Sbjct: 22  LGWVVAFAVLAGLPLLLTADSHKFYIELLSKVMIMAIFALSLQLLIGYTGLVSLGHAAYF 81

Query: 75  AIGAYSYVILG-SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           A+ AY+  +L       + W+L+  +   S A  +++G   L+ RG Y  + TL  +++ 
Sbjct: 82  AMAAYATAMLAPQSGPGNGWVLLAGALAASAALALVVGALVLRTRGVYFIMVTLAFAQMV 141

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +      +  G  G Y+  R  F                  V   +  Y+++      
Sbjct: 142 YFVFHD-TKVAGGSDGTYIYFRPEFPVP---------GEHLLTVNDPMHFYWLVWLGLVA 191

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           + ++++ + R+   +A   IR N++   +        +L AF       G+AG  +A   
Sbjct: 192 TVAVLMLVLRSRFGHALVGIRHNEQRMRAAGYATYRYQLGAFVAGGLLAGLAGFLYAIQF 251

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             ++P++  + ++   + +VILGG+ SL+         + + E    +  ++        
Sbjct: 252 GFVNPEIASWHQSGNAMLMVILGGVGSLAGAVLGAFSFVLLAEWFSTLTKHW-------- 303

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                    LM   + + + +    L+ L
Sbjct: 304 -------QLLMGGFIIVAVALLPRGLVSL 325


>gi|149374920|ref|ZP_01892693.1| inner-membrane translocator [Marinobacter algicola DG893]
 gi|149360809|gb|EDM49260.1| inner-membrane translocator [Marinobacter algicola DG893]
          Length = 315

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 63/327 (19%), Positives = 127/327 (38%), Gaps = 26/327 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L+A++  ++  L      +  +   +  +ILI  +FA   +++ G  G+LS      + 
Sbjct: 5   VLMAILAVVIAGLIAVPWIASYFYVFIFTEILILGLFAASFNLIFGYTGMLSFGHAAFFG 64

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY+  ++         + + VS   S    +++G  S++    Y A+ TL    +   
Sbjct: 65  IGAYATALVLIHLEWPFLVCLLVSMGASALLALMIGFLSVRLNEVYFAMLTLAFGMMVFA 124

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I  +W+ +TNG  G               +L  F       +      Y+V+LG+  ++A
Sbjct: 125 IAYQWRSVTNGSDG-----------LAGFTLGSFGLGLDLTLANPSVYYHVVLGIVAIAA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++  + R++     + IR N +        +   +L AF ++  F G+AG   A     
Sbjct: 174 IVLYLICRSSFGMILKAIRQNPERVSFAGLNVRTYRLVAFVIAGTFAGLAGGLIAPFLRV 233

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            SP++  +S +   I + ILGG          +A  + +          +          
Sbjct: 234 ASPELLHWSMSAEPILMAILGGTGFFLGPFIGSAAFVLLETWITTYTESW---------- 283

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                  ++ I L ++++     LL  
Sbjct: 284 -----MLVLGIILAMMVIFFRKGLLGT 305


>gi|86748919|ref|YP_485415.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86571947|gb|ABD06504.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 401

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/326 (13%), Positives = 95/326 (29%), Gaps = 32/326 (9%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y+ S+  + + Y + A  + ++ G  G+LSL     +A+G Y+  +   R      + 
Sbjct: 44  PTYLISLFGKYVCYALLALSIDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIGDRGVY 103

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA------- 148
                           LP      D    A L++  +   +   +  +            
Sbjct: 104 ANPVLPDFMVFLNYKELPWYWHGFDMFWFAALMVLVVPGLLAFCFGWLAFRSRVTGVYLS 163

Query: 149 ------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                         +  D  +     +        F          ++ +      +   
Sbjct: 164 IITQAMTYALLLAFFRNDFGFGGNNGLTDFKDILGFNVQADGTRAALFVLSCLALGIGFL 223

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           I   +  + +      IRD +     L   +   KL  F +S+   G+AGA +      I
Sbjct: 224 ICRAVVTSKLGKVLIAIRDAESRTRFLGYRVESYKLFVFTLSACMAGVAGALYVPQVGII 283

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +P  F  + +I  +  V +GG  +L   A    ++     +                   
Sbjct: 284 NPGEFAPANSIEAVIWVAVGGRGTLVGAALGAIVVNYAKTVFTS-------------GPL 330

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
                 ++     LV L+    ++  
Sbjct: 331 APYWLFMLGALFVLVTLLLPKGIIGT 356


>gi|170747863|ref|YP_001754123.1| urea ABC transporter, permease protein UrtC [Methylobacterium
           radiotolerans JCM 2831]
 gi|170654385|gb|ACB23440.1| urea ABC transporter, permease protein UrtC [Methylobacterium
           radiotolerans JCM 2831]
          Length = 384

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 109/360 (30%), Gaps = 39/360 (10%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGA------TKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           +++   I   +   + L + +   A           Y+ ++  + L Y + A  L +V G
Sbjct: 8   IDRKGWIFLAVLAAFCLAVPVLNLAVPEGSGLHLPTYLVALFGKYLAYALLAVSLDLVWG 67

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G+LSL     +A+G Y+  +   R   +  +                 LP   +  D+
Sbjct: 68  YCGILSLGHGAFFALGGYAMGMYLMRQIGARGVYGNPVLPDFMVFLNYKALPWYWYGFDH 127

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162
            A A L++  +   +   +  +                          +  D        
Sbjct: 128 FAFAALMVLLVPGLLAFLFGWLAFRSRVTGVYLSIITQALTYALMLAFFRNDMGLGGNNG 187

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +     F   P     + + ++        L   I   +  +A       +RD +     
Sbjct: 188 LTDFKDFLGLPVQSQTFRVGIFVATGIALALGYLIARVMTVSAYGKILIAVRDAESRTRF 247

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L       K  AF VS+   G+AGA +      I+P  F  + +I  +  V +GG  +L 
Sbjct: 248 LGYRPEHFKTLAFTVSAMMAGVAGALYVPQVGIINPGEFAPTNSIETVIWVAVGGRGTLV 307

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             A    ++     +  G              +        +     +V L     L+  
Sbjct: 308 GAALGAVLVNYAKTVLTG--------------AMPDAWLFALGALFVVVTLFLPRGLVGT 353


>gi|322368550|ref|ZP_08043118.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haladaptatus
           paucihalophilus DX253]
 gi|320551834|gb|EFW93480.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haladaptatus
           paucihalophilus DX253]
          Length = 657

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 62/312 (19%), Positives = 123/312 (39%), Gaps = 22/312 (7%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +G   +   ++S+ +  L++ +FA  L  V+G  GL+SL  V+ + +GAYS V+      
Sbjct: 339 IGVLYTSYEVNSLLLTTLVWALFALSLDFVMGYAGLVSLGHVLFFGLGAYSTVLTVEHGM 398

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
            S+++ + V  +++      +G  S++  G Y ++ TL  +E+F  ++ K       +  
Sbjct: 399 PSVFVALGVGMVVAALVAWAVGHLSIRVSGVYFSMITLGFAELFFQLVQKVGFTGGSEG- 457

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                 L+                 S +      YY +L     S  +   +      + 
Sbjct: 458 ------LFGFDPVYGLTSGPEVGDVSLLGDIELYYYFVLAAVVGSYLLARRMMNAPFGSV 511

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            + IR++++    +   +   K  AF VS    G+AG   A     +SP +F +  +  V
Sbjct: 512 LQGIRESEERASFIGYDVTAYKRRAFVVSGGLAGLAGGLSAIHTGGVSPSVFAWINSGEV 571

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           I + ILGGM +L        +  G+ EL       +                 ++ +   
Sbjct: 572 IVMTILGGMGTLYGPMIGAGVFFGLQELLQSFTEQWQG---------------ILGVVFV 616

Query: 330 LVILMRSHSLLR 341
           L ++     L+ 
Sbjct: 617 LFVIYVPEGLVS 628



 Score = 79.1 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 96/305 (31%), Gaps = 21/305 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96
           + +      +YV+ A GLSI+ G + +++      +A+GAY  V  +     G   WL +
Sbjct: 9   LLNGLTIGAVYVLLAAGLSIIFGVMDVINFAHGEFFALGAYLAVAIVAVGTGGGMFWLAL 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V+ ++      ++   +++       +  ++++     I         G      A   
Sbjct: 69  LVAPLVVALIAAVIERGTIRPLYGRNPLYHILLTFGLVLIFEDVISFVWGDNAKQFAQPP 128

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G                  Y  + ++V+     ++    L L RT      R    +
Sbjct: 129 LLRGP----------VDLLGFSYSKYNFFVIAIGVVMAVGTWLLLNRTRFGLVVRAGAQD 178

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++    L   I       FA  +    +AG    A +          S  I    IV+LG
Sbjct: 179 REMVRHLGIDIDRYYTLVFAFGAFLAALAGIVLGAKQSV--NPGMGNSVIIPAFVIVVLG 236

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S          +  +                  D         ++ + +  V+L+R 
Sbjct: 237 GLGSFRGAVVGGFGVGLIETFLRS-------PPFGLDAFLPNLEGLVIFLLMIGVLLVRP 289

Query: 337 HSLLR 341
             L  
Sbjct: 290 QGLFG 294


>gi|119896966|ref|YP_932179.1| ABC transporter permease [Azoarcus sp. BH72]
 gi|119669379|emb|CAL93292.1| ABC transporter permease protein [Azoarcus sp. BH72]
          Length = 543

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 87/290 (30%), Gaps = 17/290 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       +GAY+  ++   +   +   +    + +              
Sbjct: 269 ITYGVMGIINMAHGELLMVGAYATFLVQGLFRSYLPAYLDWYVVAAIPVAFFAAALVGVA 328

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     +++L  W           V      L       +      ++ V
Sbjct: 329 MER--LVLRHLYGRPLESLLATWGLSLVLIQAARVVFGPQNLELANPGWMSGGMELAAGV 386

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+   I L +++T +    R +  N+     +          AFA+
Sbjct: 387 VLPYNRIVIIGFAVFVLVLIWLMMQKTRLGMFVRAVTQNRPMAGCVGVPTARVDTLAFAI 446

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+             +    +V+LGG+  L+    A   L  V + 
Sbjct: 447 GSGVAGLGG--LALSQIANVGPAMGQGYIVDAFMVVVLGGVGQLAGAVWAALGLGIVAKF 504

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
             G                      L+++ + + I  R   +  L+    
Sbjct: 505 LEGWAGAVIAK-------------ILVLVFIIVFIQKRPQGIFALKGRFA 541


>gi|329917431|ref|ZP_08276481.1| inner-membrane translocator [Oxalobacteraceae bacterium IMCC9480]
 gi|327544542|gb|EGF30047.1| inner-membrane translocator [Oxalobacteraceae bacterium IMCC9480]
          Length = 358

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 77/345 (22%), Positives = 144/345 (41%), Gaps = 23/345 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF LR ++      +   +   + F+ +    S+ +  ++ I  L+  + A GL+I+ G
Sbjct: 18  QIFPLRQDR------IGMAIVLAIAFIGIPVLGSEYWFSAILIPFLVLALAALGLNILTG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGD 120
             G LSL      A+GAY+      R      L+   ++ + + A G++ GLPSL+ +G 
Sbjct: 72  YAGQLSLGSAAFMAVGAYAAYNFQLRIEGIPILVSFILAGLCAAAVGVLFGLPSLRIKGF 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL        +L K+   +N  +   ++ +   +     +               
Sbjct: 132 YLAVATLAAQFFVIWVLTKFSWFSNDSSSGVISAQKLEMFGYAINTPMKK---------- 181

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
              Y  +L +  + A I   L R+    AW  +RD   A   +   ++  KL AFAVSS 
Sbjct: 182 ---YIFVLAIVTVMALIAKNLVRSGTGRAWMAVRDMDVAAEVIGIPLMKTKLIAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           + G+AGA +A      + PD F    +  ++ ++I+GG+ S+      +A ++    L  
Sbjct: 239 YCGVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGAFLGSAFILLFPILLD 298

Query: 300 GMNFYY--FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                      L     + +     +    +   +++  H L R+
Sbjct: 299 NFLPPLATLLHLPLTGSAVSHIQMMMFGALIIFFLIVEPHGLARM 343


>gi|221199274|ref|ZP_03572318.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia multivorans
           CGD2M]
 gi|221205824|ref|ZP_03578839.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia multivorans CGD2]
 gi|221174662|gb|EEE07094.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia multivorans CGD2]
 gi|221180559|gb|EEE12962.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia multivorans
           CGD2M]
          Length = 316

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 97/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-----W 93
           I +  +   +Y + A G ++V G LG+++        IGA   +   +            
Sbjct: 8   ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPELGNI 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +   I+      +G    +     L  A  +   I    +                
Sbjct: 68  ATLTIGLGIAAIVCAFVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    ++     +   ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFIVMGGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            ++      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|170016904|ref|YP_001727823.1| branched chain amino acid ABC transporter permease [Leuconostoc
           citreum KM20]
 gi|169803761|gb|ACA82379.1| Branched-chain amino acid ABC-type transport system, permease
           component [Leuconostoc citreum KM20]
          Length = 292

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 103/303 (33%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GAY          L+ ++ + +
Sbjct: 8   LINGIILGSVYALLALGYTMVYGIIKLINFAHGDVYMLGAYFGYFFIQVLHLNFFIALVL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S  +S   GM++   + +       IA LI +     +L        G            
Sbjct: 68  SMAVSALLGMLIEFVAYRPLRHSPRIAVLISALGVSFLLENGMSYFYGSD---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   IR  ++    +        ++     L   + + +++T +  A R +  +Q+
Sbjct: 118 -KKAFPQAIRTIQYHIGSLQISNIQLLIISTAITLMILLTIIVQKTKMGRAMRAVSADQE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA     G       + I P M   +  I      +LGG+
Sbjct: 177 AAILMGIDVNRTISFTFAIGSALAAAGGVLIGLYYNNIDPLM-GMTPGIKAFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +  +   +               +     ++   L +++L +   
Sbjct: 236 GLIPGAALGGWLIGILETMTQAIG-------------LSDYKDAVVYAILIIILLFKPTG 282

Query: 339 LLR 341
           +L 
Sbjct: 283 ILG 285


>gi|121599417|ref|YP_992077.1| putative amino acid ABC transporter, permease protein [Burkholderia
           mallei SAVP1]
 gi|238561069|ref|ZP_00442747.2| urea ABC transporter, permease protein UrtB [Burkholderia mallei
           GB8 horse 4]
 gi|251766563|ref|ZP_02264245.2| urea ABC transporter, permease protein UrtB [Burkholderia mallei
           PRL-20]
 gi|254202446|ref|ZP_04908809.1| putative amino acid ABC transporter, permease protein [Burkholderia
           mallei FMH]
 gi|121228227|gb|ABM50745.1| putative amino acid ABC transporter, permease protein [Burkholderia
           mallei SAVP1]
 gi|147746693|gb|EDK53770.1| putative amino acid ABC transporter, permease protein [Burkholderia
           mallei FMH]
 gi|238525486|gb|EEP88914.1| urea ABC transporter, permease protein UrtB [Burkholderia mallei
           GB8 horse 4]
 gi|243065449|gb|EES47635.1| urea ABC transporter, permease protein UrtB [Burkholderia mallei
           PRL-20]
          Length = 538

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 79/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +              
Sbjct: 264 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 323

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         + +      +     S +         +
Sbjct: 324 LER--TVLRHLYGRPLETLLATFGVSLILIQAMRMIFGAQNVQVVNPSWMSGGVTVMQNL 381

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 382 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 441

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  +     V+LGG+  ++        L  V + 
Sbjct: 442 GAGIAGLGGC--ALSQIGNVGPNLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 499

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 500 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 537


>gi|88855850|ref|ZP_01130513.1| branched-chain amino acid ABC-type transport system permease
           component [marine actinobacterium PHSC20C1]
 gi|88815174|gb|EAR25033.1| branched-chain amino acid ABC-type transport system permease
           component [marine actinobacterium PHSC20C1]
          Length = 426

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 55/308 (17%), Positives = 108/308 (35%), Gaps = 25/308 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     L+  + A G+S+V G+ GL +         GA   +I+    G  IWL IP+
Sbjct: 141 IVNGLNFGLMLGLAAIGISLVYGTTGLSNFAHAEMVTFGAVMALIVSVDLGWPIWLAIPI 200

Query: 99  SAMISGACGMIMGL-PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           + ++S   G  +        R   + +  L++  I  ++ +++        G        
Sbjct: 201 AVLLSAGFGWSLDAGLWKPLRKKGVGVVQLMIVSIGLSLALRYTFQYFRGGGTEQLPGSD 260

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                +   +   +     ++  I +  +             WL RT I  A R + DN 
Sbjct: 261 SPDIPLFGSVSLSQTNMISMVISIVVICI----------FAWWLVRTKIGKATRAVSDNP 310

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +    +       + +++A  G+AG  +A  R  I  DM      ++V + V LGG
Sbjct: 311 SLAAASGIDVDQVVRVVWILAAAMAGLAGVLWAYFRPGIRWDM-GAQILLLVFAAVTLGG 369

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + +       + I+  +VE            +                + L +++L R  
Sbjct: 370 LGTAFGALVGSIIVGILVETSSLFIPSDLKYVGAL-------------VVLIVILLFRPQ 416

Query: 338 SLLRLRTP 345
            +L     
Sbjct: 417 GILGRSER 424


>gi|53726290|ref|YP_103743.1| branched-chain amino acid ABC transporter permease [Burkholderia
           mallei ATCC 23344]
 gi|52429713|gb|AAU50306.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Burkholderia mallei ATCC 23344]
          Length = 540

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 79/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +              
Sbjct: 266 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 325

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         + +      +     S +         +
Sbjct: 326 LER--TVLRHLYGRPLETLLATFGVSLILIQAMRMIFGAQNVQVVNPSWMSGGVTVMQNL 383

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 384 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 443

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  +     V+LGG+  ++        L  V + 
Sbjct: 444 GAGIAGLGGC--ALSQIGNVGPNLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 501

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 502 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 539


>gi|192361718|ref|YP_001981454.1| ABC transporter permease [Cellvibrio japonicus Ueda107]
 gi|190687883|gb|ACE85561.1| ABC transporter permease protein [Cellvibrio japonicus Ueda107]
          Length = 408

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 47/348 (13%), Positives = 96/348 (27%), Gaps = 36/348 (10%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L  +   L+ L +       +  ++  + L Y   A GL +  G  G+LSL   + + +
Sbjct: 15  ILGFIVLALILLVVLPLSLDIFRLNLVGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFGL 74

Query: 77  GAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           G Y+  +                       +                          L  
Sbjct: 75  GGYTMAMFLKLEASDPESTKIQSTPGIPDFMDWNQITELPFFWEPFHSFGFTLLAIILVP 134

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPS 174
                         +   +        +A  L  L    +                 +  
Sbjct: 135 CLFGYIIGVAMFKRRVGGVYFAIITQALAAILTILIIGQQGYTGGVNGITDLRTLQGWDI 194

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                + F YY+ + + F+   I  ++R++ +      +RD +         +   K+  
Sbjct: 195 RTDSAKYFFYYLCVVLLFVCLFIAQFIRKSKLGRLLVAMRDKEDRVRFSGYDVSNFKIFV 254

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F + + F  + GA F      +SP +     +I ++    +GG  S+        I+   
Sbjct: 255 FCIGAVFAAVGGAMFTLQVGFMSPTLVGIVPSIEMVIFCAVGGRLSIVGAVYGALIVNYA 314

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                            F  SF       M      V++   + L  L
Sbjct: 315 KT--------------SFSESFPELWLFAMGGLFIAVVMAFPNGLAGL 348


>gi|94312447|ref|YP_585657.1| inner-membrane translocator [Cupriavidus metallidurans CH34]
 gi|93356299|gb|ABF10388.1| ABC-type transporter, permease component [Cupriavidus metallidurans
           CH34]
          Length = 344

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 54/298 (18%), Positives = 126/298 (42%), Gaps = 15/298 (5%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
           +L + +FA   ++++G  GLLS      +    Y+       +G++  L +    +   A
Sbjct: 52  VLCFALFACAFNLLIGFTGLLSFGHAAFFGGAGYAAGHAMKVWGVTPELGLIFGTLSGAA 111

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
            G ++G  +++ +G Y ++ TL ++++     ++  P+T G+ G+    R          
Sbjct: 112 IGYVVGSLAIRRQGIYFSMITLALAQMLFFFCLQ-VPLTGGEDGLQGIPR---------- 160

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                      +  ++ +YYV L +   + ++I+    +      + IR+N+    SL  
Sbjct: 161 ---GKLLGVLPLSDDLTLYYVALVIIVAAFALIVRTVHSPFGQILKAIRENEPRAISLGY 217

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
            +   KL AF +S+A  G+AG+  A      +     +S +  VI + ++GG+ +LS   
Sbjct: 218 DVDRFKLLAFVLSAALSGLAGSIKALVLGFETLTDVHWSMSGSVILMTLVGGLGTLSGPI 277

Query: 286 KATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +++ +      +  +  + + L +  S     T +  +   + +L     ++  
Sbjct: 278 VGAFVVVALENKLGDIGTFLASVTGLDWFNSLGESVTMVTGVIFVICVLTFRRGIMGE 335


>gi|170697684|ref|ZP_02888772.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
 gi|170137432|gb|EDT05672.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
          Length = 316

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +  +   +Y + A G ++V G LG+++        IGA   +   +            
Sbjct: 8   VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPGLGNV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +   I+      +G    +     L  A  +   I    +                
Sbjct: 68  ATLTIGLGIAAVVCAFVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    ++     + A ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIKATDSTPGAVISVTEIVIIAVAFIVMAGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            ++      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|226830772|ref|YP_001067342.2| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|242316388|ref|ZP_04815404.1| urea ABC transporter, permease protein UrtB [Burkholderia
           pseudomallei 1106b]
 gi|210148315|gb|ABN92584.2| urea ABC transporter, permease protein UrtB [Burkholderia
           pseudomallei 1106a]
 gi|242139627|gb|EES26029.1| urea ABC transporter, permease protein UrtB [Burkholderia
           pseudomallei 1106b]
          Length = 542

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +              
Sbjct: 268 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 327

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 328 LER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 385

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 386 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 445

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  +     V+LGG+  ++        L  V + 
Sbjct: 446 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 503

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 504 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 541


>gi|117923801|ref|YP_864418.1| inner-membrane translocator [Magnetococcus sp. MC-1]
 gi|117607557|gb|ABK43012.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Magnetococcus sp. MC-1]
          Length = 307

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 92/306 (30%), Gaps = 16/306 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   IY + A G ++V G +G+++      Y I AY   I  +         + +
Sbjct: 10  LVNGVVLGSIYGLIAVGYTMVYGIIGMINFAHGEIYMISAYLTAITLAVLTTWGVDSVFL 69

Query: 99  SAMISGACGMIMGLPSLKF--RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           + +++    +           R  Y  +          + +     + N       +   
Sbjct: 70  ALILTLISSIAFTALYGWTVERIAYRPLRRSTRLAPLISAIGMSLVLQNYVRLAQGSRNQ 129

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   +L      P  FV        ++L        +   +++TA+  A R  + +
Sbjct: 130 GVPSLMEGNLRLVGENPEQFVQVTYVQLVIVLTALISMGILSWTIQKTALGRACRATQQD 189

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +     L           F + ++   +AG     +       +  F   I   +  +LG
Sbjct: 190 RVMAELLGVNTDRIISVVFVLGASMAAVAGVLVTVNYGSFDFHV-GFVTGIKAFTAAVLG 248

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ SL        IL        G     +  +  F               L LV++ + 
Sbjct: 249 GIGSLPGAMLGGLILGLSESFFAGFVNSDYKDVFAFS-------------ILVLVLIFKP 295

Query: 337 HSLLRL 342
             LL  
Sbjct: 296 SGLLGR 301


>gi|91786507|ref|YP_547459.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91695732|gb|ABE42561.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas sp. JS666]
          Length = 358

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 74/345 (21%), Positives = 134/345 (38%), Gaps = 23/345 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +  ++      L+  ++ L  F+ +    S     ++ I  LI  + A G++I+VG
Sbjct: 18  QIFPIAQDR------LVVALFLLFAFIAVPMLASDYLFRAILIPFLIISLAALGVNILVG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGD 120
             G +SL      A+GAY       R      +  + +  + +   G++ GLPSL+ +G 
Sbjct: 72  YCGQISLGSGAFMAVGAYGAYNFFVRLPGLPLIPALILGGLCATFFGILFGLPSLRVKGL 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL        + ++ K                    +    +   +     +   
Sbjct: 132 YLAVATLAAQFFADWMFLRIKWF-------------TLDSPSGSVSVSNLQVFGFPIESA 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
              Y++ L +  + A +   L R AI   W  IRD   A   +    ++AKLSAFAVSS 
Sbjct: 179 HSKYWLCLSILVVMALLAKNLVRGAIGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            +GM+GA +         P  F   ++  ++ +VI+GGM S+       A +  +     
Sbjct: 239 IVGMSGALWGFVYLGAWEPAAFSVDQSFRLLFMVIIGGMGSILGGFLGAAFITVLPIALN 298

Query: 300 GMNF--YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                              +     +    +   +++  H L +L
Sbjct: 299 QFLPVLAQLLGFEISTAGISHAELMIFGGLIVWFLIVEPHGLAKL 343


>gi|295401399|ref|ZP_06811370.1| inner-membrane translocator [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294976614|gb|EFG52221.1| inner-membrane translocator [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 292

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 103/303 (33%), Gaps = 24/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      + +GA+      +   +  +  + +
Sbjct: 7   LVNGISLGSIYALIALGYTMVYGIVRLINFAHGDVFMVGAFVGFYAITGLHVGFFPALLM 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +    G+ +   + +   +   IA LI +      +        G            
Sbjct: 67  AMAVCAVLGVCIERIAYRPLRNATRIAALITAIGVSLFIEYGTIYIRGAQ---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+   +     V+      ++L     L   + L + +T I  A R +  + +
Sbjct: 117 PEAYPSTLLPDKKIEVFGVMISSQSLWILATSIVLMILLQLIVHKTKIGKAMRAVSYDAE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +     + FA+ SA  G AG  F     +I P M      +      +LGG+
Sbjct: 177 AARLMGINVDNTISATFAIGSALAGAAGVIFGIYYVKIEPLM-GIIPGLKAFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        +L  +  L  G+ +  +   + F             I L L+++ R   
Sbjct: 236 GIIPGAMVGGLVLGVIESLVSGLGYSLWRDGVAF-------------IVLILILIFRPSG 282

Query: 339 LLR 341
           L  
Sbjct: 283 LFG 285


>gi|220912002|ref|YP_002487311.1| inner-membrane translocator [Arthrobacter chlorophenolicus A6]
 gi|219858880|gb|ACL39222.1| inner-membrane translocator [Arthrobacter chlorophenolicus A6]
          Length = 431

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/338 (12%), Positives = 98/338 (28%), Gaps = 24/338 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            ++   +  + A    +++            + +     L+  + + GLS++ G+ GL +
Sbjct: 116 FSQTSNLSVIFAFGKGIVVQQQDFGQNLLNRLVAGLSFGLLLALASVGLSLIFGTTGLTN 175

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                   +GA       +        LI                     R     +  +
Sbjct: 176 FAHGEMVTLGAVLVFGFNAIGLPFWLSLILSLVGGGLFGYAQDRGLWRPLRRRGTGLVPM 235

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           ++  I   + +++                +   T      +        V       + L
Sbjct: 236 MIVSIGLALAVRYV-----------IQFYFGGATQQLPYAQSPEVQIGPVSISPNNLWSL 284

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                + A I + L +T +  A R + DN     +    +       +        + G 
Sbjct: 285 GISAVVIALIGIVLLKTRLGKATRAVADNPALAAASGIDVDAVIRLVWITGGMLASLGGI 344

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A  R  ++ DM      +++ + V LGG+ ++      + I+   VEL          
Sbjct: 345 LWAYYRPGVTFDMGSAIL-LLIFAGVTLGGLGTVFGALIGSIIVGIFVELTTVFGLA--- 400

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                            +  + +V+L R   +L  R  
Sbjct: 401 ---------ADLKYVGALFIMIVVLLFRPQGILGRRER 429


>gi|254249056|ref|ZP_04942376.1| Branched-chain amino acid ABC-type transport system, permease
           component [Burkholderia cenocepacia PC184]
 gi|124875557|gb|EAY65547.1| Branched-chain amino acid ABC-type transport system, permease
           component [Burkholderia cenocepacia PC184]
          Length = 604

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 70/312 (22%), Positives = 124/312 (39%), Gaps = 33/312 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +  Y+        +Y + A  L++V G++G +SL       IGAY+  +L S  G 
Sbjct: 325 PWLGASPYVLQTLTSAWLYGLLALSLTLVAGTVGQISLGHAALLVIGAYASALLSSDLGW 384

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S  + IP +  I+   G ++  P+ + RG Y++IATL + E+   +++ W  +T G  GI
Sbjct: 385 SPAVTIPCAGAITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVILNWDGLTRGPLGI 444

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                L +                         Y+    +  + A + + L R+ +    
Sbjct: 445 TGIAPLPW------------------ATTARAAYWFTFAVLVVFALVQVRLLRSHLGRTL 486

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +R++  A  +        K  AFAV     G++G   A     I+   F    +I+ +
Sbjct: 487 RAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINHQTFDSQVSILAL 546

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           ++VILGG+ ++         LIG+ EL      Y                  +  + L L
Sbjct: 547 TMVILGGLGNVLGGIVGAIALIGLPELFRWAADY---------------RMLIYGLVLLL 591

Query: 331 VILMRSHSLLRL 342
           ++  R   LL  
Sbjct: 592 LVRFRPQGLLGT 603



 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 107/305 (35%), Gaps = 25/305 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  I   IY + A GL+++ G   L++      Y +GA+   +  +R+GL + + +
Sbjct: 7   DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVAL 66

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +  GA G+ +    L+       IA L+ +     IL +   +  G     V   L
Sbjct: 67  AAVVIGCGALGIAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 126

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             +          +       +A +  +LR T +  A R    +
Sbjct: 127 PDWHVR-----------IAGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +     + FA++ A  G++G       + I P M  F   +  +  +++G
Sbjct: 176 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++      + +L  V      +    +  L  F               L + ++ R 
Sbjct: 235 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 281

Query: 337 HSLLR 341
           + L  
Sbjct: 282 NGLFS 286


>gi|187929531|ref|YP_001900018.1| inner-membrane translocator [Ralstonia pickettii 12J]
 gi|309781693|ref|ZP_07676426.1| inner-membrane translocator [Ralstonia sp. 5_7_47FAA]
 gi|187726421|gb|ACD27586.1| inner-membrane translocator [Ralstonia pickettii 12J]
 gi|308919334|gb|EFP64998.1| inner-membrane translocator [Ralstonia sp. 5_7_47FAA]
          Length = 344

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 60/320 (18%), Positives = 119/320 (37%), Gaps = 27/320 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
                           Y+   G Q+LI  +FA  L +V+G  G++SL     + +GAY+ 
Sbjct: 32  IAFWCVPIAVFFLLPDYLV-FGSQVLIVGLFALSLDLVLGYAGIVSLGHAGFFGLGAYTA 90

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +L +         +   A+++   G  +    ++ +     + TL +  +      K  
Sbjct: 91  GLLAAHGWGEPLTGLAAGAVVAALAGFCVSFLVVRGQDLTRLMVTLGIGLMLYEAANKMA 150

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G  G+        LGT              F +     Y+  L + FL    +  L
Sbjct: 151 FLTGGVDGLSGVAMRNLLGT------------FEFDLEGRTAYFYSLVVLFLVFVGLRRL 198

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R+    + R I+   K   ++   +    ++AF VS+A  G+AG   A +   +  D  
Sbjct: 199 VRSPFGLSLRGIQQGPKRMPAIGANVRMRLVAAFTVSAAIAGVAGGLLAQTTQFVGLDSL 258

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            FS +  ++ +++LGG   L       A+ +   ++  G+N               +   
Sbjct: 259 GFSRSAELLIMLVLGGAGRLYGALIGAAVFMIAQDVLAGIN--------------PVYWQ 304

Query: 322 TLMVIALFLVILMRSHSLLR 341
             + + L +++L     +L 
Sbjct: 305 FWIGLLLMVIVLFARGGILG 324


>gi|325672709|ref|ZP_08152405.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Rhodococcus equi ATCC 33707]
 gi|325556586|gb|EGD26252.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Rhodococcus equi ATCC 33707]
          Length = 661

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 95/298 (31%), Gaps = 28/298 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
           G   +   + ++G+Q  +  + A+G++ V+   G + L+      +         +  G+
Sbjct: 56  GDFLTTNNLLNVGVQASVTAVLAFGMTFVI-VSGGIDLSVGSIAGLSGIVTGWTATTAGV 114

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +WL +          G++ G+     R      ATL M  + + + +            
Sbjct: 115 PMWLAVLAGMASGVLAGVVSGILITAGRMPPFI-ATLAMLSVARGLALVIADGR------ 167

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                           +  +           F+ Y +L +   + +  L LRRT    A 
Sbjct: 168 -------------PIPVDGWLATLGSGELFGFLPYPVLVLIAAAIATGLILRRTYAGRAM 214

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N +A       +   ++  +A+S  F  +AG   AA      P+       +  I
Sbjct: 215 YAIGGNAEAARLSGIRVNRQQVLVYALSGLFAAVAGILLAARLASAQPEA-GTGYELDAI 273

Query: 271 SIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + V++      GG+ +         IL  +      ++   F   +            
Sbjct: 274 AAVVIGGASLSGGVGTAVGTLIGALILAILRNGLNLLDVSAFWQQVVIGAVIAAAVLF 331


>gi|70734141|ref|YP_257781.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68348440|gb|AAY96046.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas fluorescens Pf-5]
          Length = 359

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 51/324 (15%), Positives = 97/324 (29%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
             +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  PLQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      + L  L      L           + +     
Sbjct: 103 DGLPAFMTFLSWSELPWYWAGTEHFLWALCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  +       ++   + +   S  + 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFGITEPGTRAVLFLATVALLVGSLYLG 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WRLARSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGVVNGMKSW--------------FTVAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     +V L     ++ L
Sbjct: 329 YWLFFLGALFIVVTLYLPKGVIGL 352


>gi|254175677|ref|ZP_04882337.1| putative amino acid ABC transporter, permease protein [Burkholderia
           mallei ATCC 10399]
 gi|254207778|ref|ZP_04914128.1| putative amino acid ABC transporter, permease protein [Burkholderia
           mallei JHU]
 gi|147751672|gb|EDK58739.1| putative amino acid ABC transporter, permease protein [Burkholderia
           mallei JHU]
 gi|160696721|gb|EDP86691.1| putative amino acid ABC transporter, permease protein [Burkholderia
           mallei ATCC 10399]
          Length = 542

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 79/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +              
Sbjct: 268 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 327

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         + +      +     S +         +
Sbjct: 328 LER--TVLRHLYGRPLETLLATFGVSLILIQAMRMIFGAQNVQVVNPSWMSGGVTVMQNL 385

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 386 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 445

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  +     V+LGG+  ++        L  V + 
Sbjct: 446 GAGIAGLGGC--ALSQIGNVGPNLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 503

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 504 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 541


>gi|312198718|ref|YP_004018779.1| inner-membrane translocator [Frankia sp. EuI1c]
 gi|311230054|gb|ADP82909.1| inner-membrane translocator [Frankia sp. EuI1c]
          Length = 656

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 71/298 (23%), Positives = 125/298 (41%), Gaps = 37/298 (12%)

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVI--------LGSRYGLSIWLLIPVSAMISGACGM 108
           ++VVG  GLL L  +  +AIGAY+             +   ++ +L +PV+  ++   G+
Sbjct: 342 NVVVGYAGLLDLGYIAFFAIGAYTAAYLCSATAMPWHAPVRINPFLAMPVAVAVAALAGI 401

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
            +G P+L+ RGDYLAI TL   EI Q +      IT G  G++    L          + 
Sbjct: 402 ALGAPTLRLRGDYLAIVTLGFGEIVQLLANNADGITGGARGVFGVPPLS---------VH 452

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
              F  ++ +  +  YY+L+ +  L  +++    R+    AW  IR ++ A  +     +
Sbjct: 453 AGGFHYAWGLEPLPYYYLLVVLVILVMAVLGVWERSRTGRAWAAIRQDEVAAEATGVRTM 512

Query: 229 FAKLSAFAVS---SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
             KL AFA+    S F G       A++   +P  F    +++V+++VI GGM S   + 
Sbjct: 513 RMKLLAFAIGASVSGFAG----VVLATKQFFNPQTFSLQASLLVLTVVIFGGMGSRLGVV 568

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
               +L G+                                 + ++++ R   LL  R
Sbjct: 569 VGAVVLQGLAFFLRDRVPA-------------ADRFIYFGAIVMIMMVFRPQGLLPPR 613


>gi|296273328|ref|YP_003655959.1| inner-membrane translocator [Arcobacter nitrofigilis DSM 7299]
 gi|296097502|gb|ADG93452.1| inner-membrane translocator [Arcobacter nitrofigilis DSM 7299]
          Length = 318

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 78/324 (24%), Positives = 139/324 (42%), Gaps = 30/324 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +    L+ + +          S+GI  L++ + A+   I++G  G+ ++   I + +GA
Sbjct: 6   IIATLFLVVMAVFPFLVDSAWLSIGITFLVFAVVAFSQDIILGRAGVFNMGHAIFFGMGA 65

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL   YG  I   IP + +I     +++  P +  RGDYL +AT+  + IF+ +L 
Sbjct: 66  YTTAILNVHYGFEIIQTIPFAILIPVVFSVLLAGPIIHLRGDYLLVATIGFNIIFEQVLS 125

Query: 139 K-WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                +T G  GI+  D     G  + S                 +YY+   +  ++  I
Sbjct: 126 NDVFGLTGGPNGIFGIDFFRVFGYELTSDT--------------AVYYIAFALLIVTLLI 171

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           I  L  +    A   I  N+ A  S+   I + KL AFA+ +A  G AG  FA     +S
Sbjct: 172 IRNLDTSRYGRALYYINKNEIAAKSMGINISYYKLFAFALGAAIAGAAGCVFAIQYSAVS 231

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F F ++++  +IV++GG  SL  I   T ++  + EL                    
Sbjct: 232 PESFNFMQSVMFFAIVLVGGSASLPGIIIGTFVMFVLPELFTEFKES------------- 278

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                +   A+ L +++R + +  
Sbjct: 279 --RYLIFGAAMVLTMILRPNGVWP 300


>gi|239813202|ref|YP_002942112.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239799779|gb|ACS16846.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 642

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 62/341 (18%), Positives = 133/341 (39%), Gaps = 35/341 (10%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M    LR      +  + A+   L+    L  T    Y   + I +LI  +FA  L  ++
Sbjct: 309 MQEEPLRRASKGYLWLVAALGVALMAMPLL--TADSPYTTVLMIDLLIAALFAASLHFIM 366

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G+ S      + +GAY   +L    G+ + + + V+ +++     + G  +++  G 
Sbjct: 367 GPAGMHSFGHAAYFGLGAYGAALLVRTSGMPMEIALIVAPLVAAIGAFVYGWFAVRLSGV 426

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ TL  ++I   ++ +W   T G  G+       +L                     
Sbjct: 427 YLAMLTLAFAQITWAVVYQWDSFTGGSNGLTGVWPSEWLSDKRT---------------- 470

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
              Y++ L +      ++  +  +    A R  RD+     ++   +   + +AF ++ A
Sbjct: 471 --YYWLTLVLVAAGILMLRRVLFSPFGYALRAGRDSVLRADAIGIDVKRMQWTAFVIAGA 528

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             G+AGA +A S+  ISP+     +++  + +V+LGG+ +L+           + +    
Sbjct: 529 AAGLAGALYAFSKGSISPESLSVDKSVDGLVMVLLGGIQTLAGPVVGAVTFSWLHDTVAR 588

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              Y+  +               +   + L++L+    +  
Sbjct: 589 NTDYWRAT---------------LGAIILLLVLLFPQGIAG 614



 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 97/305 (31%), Gaps = 16/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-SRYGLSIWLLIP 97
             +         +   GLS++ G   +++      + +G Y    L      L  W  + 
Sbjct: 10  FLTGLSSASSLFLVGAGLSLIFGVTRIVNFAHGSFFMVGIYLAYTLVDKLGTLGFWPAVL 69

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           ++A+  G  G ++ +  L+       +  L+ +     ++        G   +       
Sbjct: 70  IAALAVGVIGALIEMVLLRRIYKSPELFQLLATFALVLVIKDAVLYVWGPDELLGPRAPG 129

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
             G                  +  +  ++++    +   + L L RT      R    ++
Sbjct: 130 LSG----------SVDILGRQFPTYDLFLIVVGPVVLGLMWLLLTRTRWGTLVRAATQDR 179

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +   +L     +   + FA+ +    + GA                +       +V++GG
Sbjct: 180 EMVSALGVNQAWLFTAVFALGATLAALGGALQLPREPA--TLAMDLNTIGAAFVVVVVGG 237

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           M S+     A  +L    E+     +     +  +  SF+     +  I + +V++ R  
Sbjct: 238 MGSIPGAYVAALLL---SEIKAVCIWLGVVEIFGYSVSFSKLTLVVDFIVMAIVLVWRPW 294

Query: 338 SLLRL 342
            LL  
Sbjct: 295 GLLGR 299


>gi|78067298|ref|YP_370067.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia sp. 383]
 gi|77968043|gb|ABB09423.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia sp. 383]
          Length = 316

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +  +   +Y + A G ++V G LG+++        IGA   +   +            
Sbjct: 8   VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPGLGNV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +   I+      +G    +     L  A  +   I    +                
Sbjct: 68  ATLTIGLGIAAVVCAFVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    ++     + A ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFIVMAGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            ++      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|325972008|ref|YP_004248199.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy]
 gi|324027246|gb|ADY14005.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp.
           Buddy]
          Length = 298

 Score = 91.1 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 61/312 (19%), Positives = 118/312 (37%), Gaps = 32/312 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y   + +   I ++   G+  +    G+ SL      AIG+Y   IL   + L I++ 
Sbjct: 2   SSYQLGLIMNSCISIIGVTGVFAITSLAGMFSLGQAAYLAIGSYVTFILARMFNLPIFVT 61

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
                 +S  C  ++ +P+LK R DY A+ T+   ++    ++  +  TNG  G     +
Sbjct: 62  SVAGIGLSALCAYVISVPTLKLRKDYFALITMGFGQMITATIVLLERYTNGSIGYSRIPK 121

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           +                          + +V+LG+  L    +  L+ +        ++ 
Sbjct: 122 VNH------------------------LVWVILGITALVVFCVRNLKYSRFGRMCIALKT 157

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  S    +   KL  + ++SA  G+AG  +      I PD F ++ +  +   +  
Sbjct: 158 DEIAAKSFGIDVYRLKLRMYVLASAIAGIAGILYGLKNRVILPDSFGWNLSAEMQIFLFF 217

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  S++    A A+L  + EL   +          F  S     T +  + + L+I  R
Sbjct: 218 GGTNSITGAVFAGALLKLLPELFRTVTL--------FGQSLQEYRTIIYCVLILLIINFR 269

Query: 336 SHSLLRLRTPSN 347
              +      S 
Sbjct: 270 PSGVFGEYELSL 281


>gi|56695726|ref|YP_166077.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56677463|gb|AAV94129.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 614

 Score = 91.1 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 52/333 (15%), Positives = 125/333 (37%), Gaps = 34/333 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+  L+  L         +   + + +++  +FA  L  ++G  G++S      + +GA
Sbjct: 312 MVLLALVAMLAFSPAVVSDFTTILLVDVMVATLFAVSLHFMMGVGGMVSFGHAAYFGVGA 371

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +     G  +   + +  + +    +  G   ++  G YLA+ T+  ++I   +  
Sbjct: 372 YAAAMATKMLGWGMLPSMALGPVAAALAALFFGWFCVRLSGVYLAMLTMAAAQILWGVTF 431

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +W+ +T G  GI                     +P+++   +   +Y+ L +C     ++
Sbjct: 432 QWQDVTGGDDGILGV------------------WPAAWAKSDQVYFYLALVLCLGGIWLL 473

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +  +      R +RD++    ++     F +   F ++    G+AGA F  S+  + P
Sbjct: 474 RRVAHSPFGYTLRGVRDSRIRAEAIGIDTRFHQWMGFTLAGTLAGLAGAVFVFSKGSVFP 533

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           D      +I  + +V+LGG+ +L+        ++ + +    +                 
Sbjct: 534 DALSIGHSIDGLIMVLLGGIHALAGPVYGAMAMVLIEDWVSRL----------------D 577

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               +    +  V+L+    +         L R
Sbjct: 578 YWRFIFGGIILTVVLLAPDGIAGGVRRLIQLVR 610



 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 97/307 (31%), Gaps = 29/307 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI---WLL 95
           + +         + A GLSI+ G   +++      Y +GAY    L +     I   W  
Sbjct: 8   LLTGLANASSLFLIASGLSIIFGVTRIVNFAHGSFYMLGAYLAYTLVTTLQGGIPGYWFS 67

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  +A++ G  G+++ L  L+       +  L+ +     I+        G   +     
Sbjct: 68  VLAAAVLVGGIGLVVELTILRRIYRAPELFQLVATFGVVLIVQDLTLAIWGAEDLLGPRA 127

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                     +   ++     + A+I L   RT      R    
Sbjct: 128 PGLDRA----------VRLMGEPIPEYDLALIAIGPAVLAAIWLVFHRTRWGVLVRAATQ 177

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++   +L     +   +AF + SA  G+ GA                S       +V++
Sbjct: 178 DREMVGALGVNQAWLFSAAFVLGSALAGLGGALQIPR--EAVSLQMDLSIIGEAFVVVVI 235

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S++    A  ++  +      +              F      L  + +  V+++R
Sbjct: 236 GGMGSVTGAFVAAVLISVLNAFAILI--------------FPQISIVLPFVVMAAVLIVR 281

Query: 336 SHSLLRL 342
            + L   
Sbjct: 282 PYGLFGR 288


>gi|167570933|ref|ZP_02363807.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia oklahomensis C6786]
          Length = 538

 Score = 91.1 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/291 (12%), Positives = 78/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +              + +     +        
Sbjct: 264 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYAPGAFDWYPLAAIPASFLAAAAIGIV 323

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 324 LER--TVLKHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVMQNL 381

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 382 ILPYNRLAILAFALAVVGVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 441

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  I     V+LGG+  ++        L  V + 
Sbjct: 442 GAGIAGLGGC--ALSQIGNVGPDLGQSYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 499

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 500 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 537


>gi|78065485|ref|YP_368254.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia sp. 383]
 gi|77966230|gb|ABB07610.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia sp. 383]
          Length = 539

 Score = 91.1 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/291 (10%), Positives = 77/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +              +++     +        
Sbjct: 265 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRYAPGAFDWYPLVAVPVSFVTAALVGIV 324

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 325 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 382

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 383 ILPYNRLAILAFALAVVFVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 442

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          +  I     V+LGG+  ++        L    + 
Sbjct: 443 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLASKA 500

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +   +  S  
Sbjct: 501 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAPKGRSAE 538


>gi|222149558|ref|YP_002550515.1| ABC transporter membrane spanning protein (urea/amide)
           [Agrobacterium vitis S4]
 gi|221736540|gb|ACM37503.1| ABC transporter membrane spanning protein (urea/amide)
           [Agrobacterium vitis S4]
          Length = 386

 Score = 91.1 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 57/346 (16%), Positives = 99/346 (28%), Gaps = 33/346 (9%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L      A     Y+ ++  + L Y M A  L +V G  G+LSL     +A+G Y+  + 
Sbjct: 33  LATSPDSALHMPTYLVALFGKYLTYAMLALALDLVWGFCGILSLGHGAFFALGGYAMGMY 92

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
             R                        LP      D    A L++      +   +    
Sbjct: 93  LMRQIGPRGTYGDPVLPDFMVFLNWKELPWFWHGFDMFWFAALMVLVAPGLLAFVFGWFA 152

Query: 145 NGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                                    +  D  +     +        F          ++ 
Sbjct: 153 FRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILGFNIQADGTRAALFS 212

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +       S  ++  + R+        IRD +     L   +   KL AF VS+   G+A
Sbjct: 213 LSALFLAGSLLLVSAIVRSKYGKVLVGIRDAESRTRFLGYRVENMKLFAFVVSAMMAGVA 272

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA +      I+P  F  + +I V+    +GG  +L        ++ G   +  G+    
Sbjct: 273 GALYVPQVGIINPGEFSPANSIEVVIWTAVGGRATLIGPIIGAVLVNGGKTIFTGL---- 328

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                     F       +      V L     ++   T S    R
Sbjct: 329 ----------FPNAWLFALGGLFVAVTLFLPKGIVGTVTQSLLRRR 364


>gi|107023435|ref|YP_621762.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054]
 gi|116690517|ref|YP_836140.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
 gi|170733858|ref|YP_001765805.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
 gi|254247441|ref|ZP_04940762.1| ABC transporter permease protein [Burkholderia cenocepacia PC184]
 gi|105893624|gb|ABF76789.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116648606|gb|ABK09247.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia cenocepacia HI2424]
 gi|124872217|gb|EAY63933.1| ABC transporter permease protein [Burkholderia cenocepacia PC184]
 gi|169817100|gb|ACA91683.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
          Length = 316

 Score = 91.1 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 97/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +  +   +Y + A G ++V G LG+++        IGA   +   +            
Sbjct: 8   VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPGLGNV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +   I+      +G    +     L  A  +   I    +                
Sbjct: 68  ATLTIGLGIAAVVCAFVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    ++     +   ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFIVMGGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            ++      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        + L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFVVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|328544749|ref|YP_004304858.1| ABC branched-chain amino acid transporter, permease protein
           [polymorphum gilvum SL003B-26A1]
 gi|326414491|gb|ADZ71554.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Polymorphum gilvum SL003B-26A1]
          Length = 317

 Score = 91.1 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 50/305 (16%), Positives = 106/305 (34%), Gaps = 26/305 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +   +   + I  +FA    ++ G  G++SL   + + IGAY+   L +       L +
Sbjct: 26  PFYLGLISSLFILAIFALSYDLLQGYAGVVSLGHAVYFGIGAYTSATLSNHGVNEPVLGL 85

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + ++SGA   I+    +        + TL +  +F     K   +T G  G       
Sbjct: 86  VAALVVSGAVAGILARIVVVGTDLTRLLVTLGIGFLFHEAANKAHWLTGGADGKS----- 140

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     +        F       ++  L +  L   ++L +  +    A R IR+N
Sbjct: 141 -------DFTVGPVLGLFQFDFLGRTAFFYTLAVLVLVYLLLLRITSSPFGLALRGIREN 193

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                ++  ++       + +S A  G+AGA    +    S DM  F  +  V+ +  LG
Sbjct: 194 AGRMPAIGASVSRHLAVTYVMSGAIAGVAGALLTQTSQFASLDMLGFERSAEVVIMTALG 253

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  S+  +         + +    ++  Y++                + + L + + +  
Sbjct: 254 GTGSIPGVVLGATAFGYLKDALSALSPKYWHLG--------------IGVVLMVSVFVLP 299

Query: 337 HSLLR 341
             +  
Sbjct: 300 DGIAG 304


>gi|307299182|ref|ZP_07578983.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306914978|gb|EFN45364.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 348

 Score = 91.1 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 111/339 (32%), Gaps = 7/339 (2%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +++  K++  +  +   +L L+L       +I  +     IYV+    L+++ G  G  S
Sbjct: 1   MDRKLKLVITIIELLVFILLLWLAENYIDAFIKRILNVAAIYVILGVSLNLINGFTGQFS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      A+GAY+  +L     L    +      I      I               A  
Sbjct: 61  LGHAGFMALGAYASALLYMSPSLK--AMNFFIQPIIWPLSEIEIPFFFALLIGGTVAAIA 118

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +     + +    +     G     R+        +            +      Y  
Sbjct: 119 GFAVGAPCLRVGGDYLAIVTYGFAEIIRVILNNLQSITN----GPLGLKGLPTYTNLYWS 174

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
            G    +   I  L  ++   A ++IR+++ A  ++   +   K  AF + + F G+ G 
Sbjct: 175 WGWALFTVFFIKKLVDSSYGRALKSIREDEVAAEAMGVNLFKHKTLAFVIGAFFAGIGGG 234

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
              +    I P+ F  +    ++ IV+LGG+ S++        +  ++EL   +      
Sbjct: 235 LLGSLLMTIDPNSFNIALTFQIVMIVLLGGLGSITGSVVMGISVAFLMELLRFVESPMTI 294

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                          +  + L + ++     L   +  S
Sbjct: 295 FGFTIP-GIPGMRMLIFALILVITVIFFRRGLFGHKEFS 332


>gi|221201127|ref|ZP_03574167.1| urea ABC transporter, permease protein UrtC [Burkholderia
           multivorans CGD2M]
 gi|221206420|ref|ZP_03579433.1| urea ABC transporter, permease protein UrtC [Burkholderia
           multivorans CGD2]
 gi|221213756|ref|ZP_03586730.1| urea ABC transporter, permease protein UrtC [Burkholderia
           multivorans CGD1]
 gi|221166545|gb|EED99017.1| urea ABC transporter, permease protein UrtC [Burkholderia
           multivorans CGD1]
 gi|221173729|gb|EEE06163.1| urea ABC transporter, permease protein UrtC [Burkholderia
           multivorans CGD2]
 gi|221178977|gb|EEE11384.1| urea ABC transporter, permease protein UrtC [Burkholderia
           multivorans CGD2M]
          Length = 395

 Score = 91.1 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/350 (13%), Positives = 99/350 (28%), Gaps = 32/350 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 52  LAVGIGVPLAALVAPESSAFHLSAYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 111

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                          +++ L   
Sbjct: 112 FALGGYAIGMYLMREIGRDGQYGSDLPDFMVFLDWHQLPWYWAGTQHLAWALLLVVLVPA 171

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +   A     +     +I            Y  +  +          R   FP +
Sbjct: 172 VLAWVFGFFAFRSRVKGVYLSIITQALTFAAMLLFYRNETGFGGNNGFTDFKRIAGFPIT 231

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +  +      L+      +  + +      +RD +     L  + +  KL  +
Sbjct: 232 SPGTRTVLLLLTFATLVLAFVAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 291

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+   G+AGA +      ++P       +I +   V +GG  +L         + G  
Sbjct: 292 TVSAVLCGIAGALYVPQVGIVNPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 351

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
            +                  F       + +   LV L+    ++ +   
Sbjct: 352 SVFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGVVER 387


>gi|307324511|ref|ZP_07603718.1| inner-membrane translocator [Streptomyces violaceusniger Tu 4113]
 gi|306889755|gb|EFN20734.1| inner-membrane translocator [Streptomyces violaceusniger Tu 4113]
          Length = 647

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 52/310 (16%), Positives = 101/310 (32%), Gaps = 27/310 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             V+    + L  G   +   + ++G+Q  +  + A+G++ V+ S G + L+     A+ 
Sbjct: 28  ALVLLVAAMSLLSGDFLTTGNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVAALS 86

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A       +  GL +W+   ++     ACG++ G      +      ATL M  I + + 
Sbjct: 87  ATVLAWSATSQGLPVWIAALLAVATGVACGLVSGALVSFGKLPPFI-ATLAMLSIGRGLA 145

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    + +    +               ++   +L M  +    
Sbjct: 146 L--------------------VISQGSPIAIPDSMSGLGDTIGGWLPIPVLVMIGMGLIT 185

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L RT    A   I  N++A       +   KL  +A+S  F  +AG   A+      
Sbjct: 186 AGVLGRTYAGRAMYAIGGNEEAARLSGIRVTRQKLVIYALSGGFAAVAGIVLASRLSSAQ 245

Query: 258 PDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           P      E   + ++VI      GG+   S       IL  +      +    F   +  
Sbjct: 246 PQAAVGYELDAIAAVVIGGASLSGGVGKASGTLIGALILAVLRNGLNLLEVSPFWQQVVI 305

Query: 313 DCSFNMRHTT 322
                +    
Sbjct: 306 GVVIALAVLL 315


>gi|163855102|ref|YP_001629400.1| ABC transporter permease protein [Bordetella petrii DSM 12804]
 gi|163258830|emb|CAP41129.1| ABC transporter permease protein [Bordetella petrii]
          Length = 294

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 60/308 (19%), Positives = 129/308 (41%), Gaps = 21/308 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ ++ +   +  M A  L+ ++G  G+ SL   + + +GAY    +   +  S+ L +
Sbjct: 3   AYLQNIAVLFCVNAMLAVTLNFIMGYAGIFSLAHAVFFGVGAYVAANIAMHFSDSLLLCV 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + +++GA  M++ LP+L+ RG+Y   A+L +  I   +  +WK +T G  G+      
Sbjct: 63  AAAVLVAGALSMVLALPALRVRGEYFVAASLGLQVIGVTVFSEWKGVTGGLGGLVGIPPP 122

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G  + +   F     + +   + +   LL              R +   +   IRD+
Sbjct: 123 TVFGHALATPGEFLALAVAGLAAVLLITTALL--------------RGSFGRSLMAIRDS 168

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  +    +   K  + AVS+   G+AGA +A     ++ + F    +I+++++VI+G
Sbjct: 169 ESAAQAAGKWVAAIKTLSVAVSAGLAGVAGAIYAFYMSFVNVEGFMLETSILLMAMVIIG 228

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  ++       A+L+ +      +                     +    + L+++ R 
Sbjct: 229 GTGTVFGPIIGAALLMLLPAALTYL-------PFLPPSELGTVQQIVYGAIMVLLMMYRP 281

Query: 337 HSLLRLRT 344
             L+  R 
Sbjct: 282 GGLVGGRR 289


>gi|222106248|ref|YP_002547039.1| ABC transporter membrane spanning protein (branched chain amino
           acid) [Agrobacterium vitis S4]
 gi|221737427|gb|ACM38323.1| ABC transporter membrane spanning protein (branched chain amino
           acid) [Agrobacterium vitis S4]
          Length = 351

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 74/330 (22%), Positives = 135/330 (40%), Gaps = 16/330 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  LL +  L    +    D + +  L   +   GL+++ G  G +SL      
Sbjct: 21  ISVATLLVLLLAYGILPVIGTSYLFDGILLPFLALSLAGVGLNLLTGYAGQVSLGSAAFM 80

Query: 75  AIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           A+GA++          L + + I ++ + + A G++ GLPSL+ RG YLA++TL      
Sbjct: 81  AVGAFACFNFDLRAGSLPLIVSILLAGLSAAAIGIVFGLPSLRLRGFYLAVSTLAAQFFV 140

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           Q  L K+   +N  A   +                            +  YY  L +  L
Sbjct: 141 QWALTKFSWFSNDSASGVIDAPPLT-------------LAGFTFEGPVGRYYFALIIVTL 187

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-AS 252
              +   L  +     +  +RDN+ A   +   ++  KL AFAVSS  IG+AG  +A A 
Sbjct: 188 VTFLAHRLVISQTGRNFIAVRDNETAARIIGVPVLRTKLLAFAVSSFIIGIAGVLWAFAY 247

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              + P  F    +  V+ I+I+GG+ SL       A+++    +   +  + F  L   
Sbjct: 248 LRTVEPAGFNLDRSFQVLFIIIIGGLASLRGAFFGAALIVVFPVVLSRVGAFVFGDLFDS 307

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +M    ++   + L +++    L  L
Sbjct: 308 GV-LDMTQRIVLGALIILFLILEPDGLAAL 336


>gi|163757947|ref|ZP_02165036.1| putative permease component of ABC transporter [Hoeflea
           phototrophica DFL-43]
 gi|162285449|gb|EDQ35731.1| putative permease component of ABC transporter [Hoeflea
           phototrophica DFL-43]
          Length = 363

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 62/326 (19%), Positives = 119/326 (36%), Gaps = 19/326 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V   L++        + + +      IL  ++ A   +++ G  GL+S+       IGA
Sbjct: 24  VVAVLLIVLAIALPAFASRSLIQDMFFILTMLVLAQFWNLLAGYGGLVSVGQQAFVGIGA 83

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+   +    G      I ++ + +    +     + + +G Y AI T +++E+ + ++ 
Sbjct: 84  YAMFSVVILMGFDPVPSILIAGVAALLLAIPTAFFAFRLQGAYFAIGTWVIAEVVRLLVA 143

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +WK +  G        R           I       S    +I  Y++ + +   + + I
Sbjct: 144 QWKAVGGGTG--TSLPRTATREMWFTETIETLFGVRSAAARDILAYWLAVVLAVATIAGI 201

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
            WL RT        +RDN +A  S+    +  K + F VS+   G+AG      + RISP
Sbjct: 202 YWLLRTKRGLGLAAVRDNIEAAKSVGVDAVRMKWTVFLVSAFGTGIAGGLIYMQKARISP 261

Query: 259 DMFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           D           VI IV++GGM ++        +   +  L                   
Sbjct: 262 DAAFSLQDWTAYVIFIVVIGGMGTIEGPILGVLVFFILQSLLADY--------------- 306

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
              +   + +    ++L     L  L
Sbjct: 307 GSWYLMALGVIGITIMLFAPRGLWGL 332


>gi|163734445|ref|ZP_02141885.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
 gi|161392453|gb|EDQ16782.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
          Length = 327

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 55/324 (16%), Positives = 114/324 (35%), Gaps = 15/324 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+  L           + +  ++  + +I+ + A GL+I +G  GL+SL   + + +G 
Sbjct: 10  VVLIGLCAVPIWALLVDEPFTITLATRAVIFALAAVGLNIALGWGGLVSLGHAVFFGLGG 69

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL         ++     +       ++ L ++   G    +  L+         I
Sbjct: 70  YAMGILAHHAQTFTPVMEWPFLIEGTKSMPVIWLVAMISAGVAALVIGLLSLRTAGVYFI 129

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                       +      + G    S+     FP    +  I  + +   +  +   I 
Sbjct: 130 MITLAFGQMFYYFAISWAEYGGEDGLSIYVRNDFPGLNTLVPIHFFALCFVILCIVLFIN 189

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++    A    R       ++    +  KL AF +S    G+AGA FA     +SP
Sbjct: 190 ARLIKSPFGLALNAARQVPTRVETVGMDPVRLKLVAFVISGVITGLAGALFADLNRFVSP 249

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            MF +  +  ++  VILGG+  L        + + +  +  G++ Y+             
Sbjct: 250 TMFSWQMSGEIMIFVILGGVARLFGPVVGAVLFVMLEHILGGLSNYWH------------ 297

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +   L +++L     ++ L
Sbjct: 298 ---IYLGALLLVIVLFARGGIIGL 318


>gi|149926555|ref|ZP_01914816.1| ABC-type transporter, permease component [Limnobacter sp. MED105]
 gi|149824918|gb|EDM84132.1| ABC-type transporter, permease component [Limnobacter sp. MED105]
          Length = 328

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 125/302 (41%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           + +++L + +FA   ++++G  GLLS           Y    +    GL   L +     
Sbjct: 27  LLMKLLCFALFACAFNLLIGYTGLLSFGHAAFLGGAGYIAGYVIRDLGLPFELGLLAGVA 86

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G++MG  +++ +G Y  + TL ++++   I ++    T G+ G+    R      
Sbjct: 87  FAAFLGLVMGALAIRRQGIYFTMITLALAQMLYFIFLQAP-FTGGEDGLQGIPRGT---- 141

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                          +  ++ +Y+V+L +C    ++I+    +      + I++N+    
Sbjct: 142 ---------LLGVVDLSDDLTLYFVVLAICIAGYALIVRTVHSPFGQVLKAIKENEPRAI 192

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   KL  F +S+A  G+AGA  A+     +     ++ + +V+ + ++GG+ +L
Sbjct: 193 SLGYDVDKYKLLVFVLSAALSGLAGATKASVLGFETLTDVHWTMSGLVVLMTLVGGLGTL 252

Query: 282 SKIAKATAILIGVVELCCGMNFYY-FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +       ++I +         +    + + +  S   + T +      +V+L     ++
Sbjct: 253 AGPIVGAIVIIALENRIGEFGTWMAVTTDIAWFRSLGEQVTIVTGFIFIVVVLAFRRGIV 312

Query: 341 RL 342
             
Sbjct: 313 GE 314


>gi|167771044|ref|ZP_02443097.1| hypothetical protein ANACOL_02398 [Anaerotruncus colihominis DSM
           17241]
 gi|167666714|gb|EDS10844.1| hypothetical protein ANACOL_02398 [Anaerotruncus colihominis DSM
           17241]
          Length = 301

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 61/311 (19%), Positives = 116/311 (37%), Gaps = 32/311 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y   + IQ  I ++   G+  + G  G+ SL      AIGAY   IL ++ GLS W+ 
Sbjct: 2   NSYYVGLLIQASISIIAITGIFALTGLAGMFSLGQAAYMAIGAYITFILAAKTGLSFWIT 61

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
                        +  +P+++ R DY ++ ++ + +    +LI +  ITNG  G     +
Sbjct: 62  SLGGIGACMLVAWLAAMPTVRLRKDYFSLISVGLGQTITALLITFSDITNGSQGFSKIPK 121

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           +                          +  + L +  LS   +  L+ +        +++
Sbjct: 122 VEH------------------------LLPLALLVTALSIFCVRNLKYSRYGRMSIALKN 157

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  S    +   K+  + + S   G+AG  +      + P+ F ++ +      +  
Sbjct: 158 DELAAKSFGIDVYKLKIKVYILGSVIAGLAGILYGLQNRVLLPESFGWTASSEQEIFLFF 217

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  SL+    + A+L  + E    +          F  S     T L  I + L+I  R
Sbjct: 218 GGTNSLTGAVISAALLKCLPEFFRNVTL--------FGQSLQEYRTILYCILILLIINFR 269

Query: 336 SHSLLRLRTPS 346
              L+     S
Sbjct: 270 PSGLMGEHELS 280


>gi|160901456|ref|YP_001567038.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160367040|gb|ABX38653.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 333

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 58/320 (18%), Positives = 124/320 (38%), Gaps = 24/320 (7%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            LL    + A        S+  ++LI+ + A G ++++G  GLLS    I + +G+Y+  
Sbjct: 10  LLLALAIVVAMPLCMQSGSLASEVLIFGLAAMGCNLLLGYTGLLSFGQGIFFGLGSYTIA 69

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +L +R+ L + L +  +  +      I+G  +++ RG Y  + TL  +++F  +      
Sbjct: 70  LLLTRWPLPMPLALLAATAMGAVGAAIVGWVAIRQRGTYFVMLTLAFAQMFYFLAYSATD 129

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           IT G  G+    R           +         +      Y  +  +  +   ++  + 
Sbjct: 130 ITGGDNGLLDVPRPA---------LAVAGQTLWPLATPWQYYGFVAVLFLVVFWLLRRVC 180

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            +        +RDN++   ++   +   KL AF +S A  G+AGA  A           +
Sbjct: 181 DSMFGRTLLAVRDNEERAAAVGYDLRLLKLQAFVISGAVTGLAGALHAMMTGIAPLSNAE 240

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           +  + +++ + ++GG  +L       A  + + +    +   +                 
Sbjct: 241 YHTSEMILVMTVIGGTGNLLASVLGAAFYVLLGDWLSTLWPRW---------------LL 285

Query: 323 LMVIALFLVILMRSHSLLRL 342
           L+ + L +V L     L  L
Sbjct: 286 LLGVVLMIVSLGLQRGLWGL 305


>gi|153004042|ref|YP_001378367.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5]
 gi|152027615|gb|ABS25383.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5]
          Length = 328

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 58/307 (18%), Positives = 117/307 (38%), Gaps = 25/307 (8%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y   +  +ILI   FA G +++ G  GLLS      +  GAY+  ++      S+WL 
Sbjct: 29  PSYPLVVLTEILILGTFALGFNVLFGYAGLLSFGQAAFFGTGAYAAGLVLLHGPRSLWLA 88

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  +   +    + +G  +++    + +I TL +  +  +    W+ +T G  G      
Sbjct: 89  LLAAVAAAALLALPLGALAVRRDEIFFSILTLGLGMMIHSAAFGWREVTGGSDG------ 142

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                T            +  ++    MY + L    L   ++  + R+      +  R+
Sbjct: 143 ----LTGFTVPKLDLLVTAVPLVRPRNMYLLALAATALVTLVLRLVVRSPFGLLLQASRE 198

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N++        +   +L+AF +S+A  G+AGA FA      +PDM  +S +   + + IL
Sbjct: 199 NRQRLAFAGGNVPRLRLAAFVLSAAVCGLAGALFALFNRIAAPDMLHWSFSARPVLMTIL 258

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  +        A   G+ +L                  +      ++   L  ++++ 
Sbjct: 259 GGAGTFLGPIVGAAAFFGLEQLVTR---------------WTQDWMIVLGALLVPIVILF 303

Query: 336 SHSLLRL 342
              L+  
Sbjct: 304 PRGLVGT 310


>gi|121592898|ref|YP_984794.1| inner-membrane translocator [Acidovorax sp. JS42]
 gi|120604978|gb|ABM40718.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Acidovorax sp. JS42]
          Length = 358

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 78/345 (22%), Positives = 139/345 (40%), Gaps = 23/345 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +  ++      +  ++   + F+ + A  S  +  ++ I ++I  M A G++I+VG
Sbjct: 18  QIFPITQDR------IAILLLLAVAFVAVPAMASDYFYRAILIPLVIMSMAALGVNILVG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGD 120
             G +SL      A+GAY       R+     +  + +  + +   G++ GLPSL+ +G 
Sbjct: 72  YCGQISLGSGAFMAVGAYGAFNFFVRFPGMPLVAALILGGLCATFFGILFGLPSLRVKGL 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL        + ++ K  TN      V+     +                     
Sbjct: 132 YLAVATLAAQFFSDWMFLRIKWFTNNSDSGSVSVSNLQVFGMPLDSAMAK---------- 181

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
              Y   L +  + A +   L R AI   W  IRD   A   +    ++AKLSAFAVSS 
Sbjct: 182 ---YLFCLTLLVVVALLAKNLVRGAIGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            +GMAGA +A        P  F    +  ++ +VI+GGM S+       A ++ +     
Sbjct: 239 IVGMAGALWAFVHLGSWEPAAFSVEVSFRLLFMVIIGGMGSIMGAFFGAAFIVVLPIFLN 298

Query: 300 GMNFYY--FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                      +     + +     +    +   +++  H L +L
Sbjct: 299 QFLPAVAGLFGVDISTAAVSHAELMIFGALIVWFLIVEPHGLAKL 343


>gi|51246340|ref|YP_066224.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Desulfotalea psychrophila LSv54]
 gi|50877377|emb|CAG37217.1| probable high-affinity branched-chain amino acid ABC transporter,
           permease protein [Desulfotalea psychrophila LSv54]
          Length = 320

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 64/322 (19%), Positives = 135/322 (41%), Gaps = 31/322 (9%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
              L +            ++    +++ + A  + I++G  G+ ++   + + +GAY   
Sbjct: 12  LFFLLMLSLPALLDSRWLAVATTFVVFSIVALSMDIILGKAGMFNMGQALFFGMGAYISA 71

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK-WK 141
           IL + +G  +   +P + +I    G+I+  P +  RGDYL +A++  + +F  ++     
Sbjct: 72  ILNAHFGWPMLATVPAAIIIPAIFGVILAGPIVHLRGDYLLVASIGFNIVFIQVVQNDLG 131

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G  GI+  D +   G                    +  +Y  L   FL+  ++  L
Sbjct: 132 GVTGGPNGIFGLDMINLPGFMDSPQ--------------LGAFYAALIALFLTFLLMYNL 177

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            ++    A   +R+++ A   +       K+ AFAV +   GMAG F+A     +SP+ F
Sbjct: 178 AKSKAGRALHYLREDELAASCVGINTRVYKIFAFAVGAGIAGMAGTFYANQYSAVSPEAF 237

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F ++++  SIVI+GG  S+  I     ++  + E+                  F     
Sbjct: 238 NFLQSVLFFSIVIVGGS-SIPGILLGVFVMFVLPEIFR---------------DFATWRY 281

Query: 322 TLMVIALFLVILMRSHSLLRLR 343
            +  +A+ + +++R   +   +
Sbjct: 282 FIFGLAMIVTMIIRPRGICPAK 303


>gi|289626464|ref|ZP_06459418.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289647184|ref|ZP_06478527.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330868315|gb|EGH03024.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. aesculi str. 0893_23]
          Length = 355

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 67/328 (20%), Positives = 133/328 (40%), Gaps = 16/328 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +      +  F+ +    +  +  ++ I  L+  +   GL+++ G  G LSL      A+
Sbjct: 27  IGLCSLLVFAFIAVPLLGNDYWFSAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAV 86

Query: 77  GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GA++   +     G+ + L   +  ++S    ++ GLPSL+ +G YL ++TL    + + 
Sbjct: 87  GAFAAYNLQLRVPGMPLLLGFALGGLVSALVALLFGLPSLRIKGFYLLVSTLAAQFVVEW 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L ++   TN  A   +                               Y + LG+  L  
Sbjct: 147 VLTRFSWFTNDNASGVITSPPLI-------------IAGVNFSSPQGRYLLTLGLVVLLF 193

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254
            +   L R  +   W  +RD   A   +   +  AKL AFA+S  ++G+AG+ +A A   
Sbjct: 194 WLARNLLRGELGRNWMAVRDMDTAAAVIGIRLFKAKLLAFAISGFYLGVAGSLWAFAYLG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            + P  F  + +  ++ I+I+GG+ S+       A ++    L   ++      L+    
Sbjct: 254 TVEPHGFDLNRSFQILFIIIIGGLGSVQGNFLGAAFIVLFPILLGNLSALLPVGLIDSGQ 313

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
             N++   L    +   ++     L RL
Sbjct: 314 LENIQKM-LFGALIIAFLIKEPEGLARL 340


>gi|220921540|ref|YP_002496841.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219946146|gb|ACL56538.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 294

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 66/292 (22%), Positives = 121/292 (41%), Gaps = 18/292 (6%)

Query: 50  VMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMI 109
           ++ + GL++  G  GL++   V  +AIGAY+  +L  +      L    +A+++G     
Sbjct: 16  MLLSLGLTLQYGLTGLINFGHVGFFAIGAYASALLALKGVPVP-LGFAAAALLAGLAAWP 74

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           +GL +L+ R DY AI TL  SE+ + ++   + +TNG  G+    RLY            
Sbjct: 75  LGLVALRLRDDYFAIVTLGFSEVVRIVVTSERWLTNGVQGLPGIPRLYPG---------- 124

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                +    +      +L +   +  +I  +  +        IRD ++A  +L      
Sbjct: 125 ----LTGPAAQGATLATVLAVTLAAVWMIRRIAASPFGRLIEAIRDAEEAVTALGKDPAR 180

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            K+    V +   G+AGAF+A     I P+ F       V   +I+GG+  +S     TA
Sbjct: 181 LKVQVLVVGAGLAGIAGAFYAHYITYIVPEQFVPLVTFYVWMAMIMGGVGRVSGAVVGTA 240

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           IL+  +E    +           +         ++ + L L ++ R   L+ 
Sbjct: 241 ILMAFLEGSRFLRDLVPGIS---EVDMASVRIGVVGLLLILFVMFRPQGLMG 289


>gi|186477004|ref|YP_001858474.1| urea ABC transporter permease UrtC [Burkholderia phymatum STM815]
 gi|184193463|gb|ACC71428.1| urea ABC transporter, permease protein UrtC [Burkholderia phymatum
           STM815]
          Length = 398

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 107/349 (30%), Gaps = 32/349 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +   L V +  L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   
Sbjct: 53  LIVAVGLGVPFTALVLPQTSAFHLSAYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHG 112

Query: 72  IAYAIGAYSYVILGSRYGLS----------IWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           + +A+G Y+  +   R                + +    +     G      +L      
Sbjct: 113 LFFALGGYAIGMYLMRAIGHDGKYGSDLPDFMVFLDWHRLPWYWEGTQHLAYALLLVVLV 172

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT--------VRSLIRFFRFP 173
            A    +         +K   ++     +  A  L F                 R   FP
Sbjct: 173 PAAIAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIAGFP 232

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
            +       ++ +  G+  L+      +  + +      +RD +     L    +  KL 
Sbjct: 233 ITHPGTRTTLFLMTFGVLVLAFIGARAIVTSKLGRVVTAVRDGETRLMFLGYNPLAYKLF 292

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            + VS+   G+AGA +      I+P       +I +   V +GG  +L         + G
Sbjct: 293 VWTVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIIGAFAVNG 352

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                                 F       + +   LV L+  + ++ L
Sbjct: 353 AKSFFTAY--------------FAEYWLFFLGLIFVLVPLLLPNGIMGL 387


>gi|330971012|gb|EGH71078.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 226

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 23/234 (9%)

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSF 176
            TL   EI +  L     IT G  GI   ++  F G T         ++   FF  P + 
Sbjct: 3   VTLGFGEIIRIFLRNLTDITGGPNGISNIEKPTFFGLTFERKAAEGMQTFHEFFGLPYNS 62

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
           +   IF+Y + L +   +  +I  L R  I  AW  +R+++ A  +L       KLSAF 
Sbjct: 63  INKVIFLYLIALLLALAALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFT 122

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           + +AF G AG+FFAA +  I+P+ F F E+ I+++IV+LGGM S   +  A  ++I + E
Sbjct: 123 LGAAFAGFAGSFFAARQGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPE 182

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           L    + Y                  +    + L+++ R    L ++ P   L+
Sbjct: 183 LMREFSDY---------------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 221


>gi|319408544|emb|CBI82197.1| permease protein of ABC transporter [Bartonella schoenbuchensis R1]
          Length = 352

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 66/339 (19%), Positives = 117/339 (34%), Gaps = 7/339 (2%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K   +      +  L+ FLF   T    Y   +   I I  + A  L+++ G  G+ S
Sbjct: 1   MAKSTTLFLSFISIVALIGFLFYADTHFNNYTLRIINLIAINAILAISLNLIYGFTGMFS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      AIGAY   IL          ++ +   I+     +     +      L  A +
Sbjct: 61  LGHAGFMAIGAYICAILLLSPEQK--EMMWILEPIAEPLQNLQLPFFIAVIISGLCAAAI 118

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +      + +    +     G     R+     T  +                + Y  L
Sbjct: 119 GLLVALPILRLGGDYLGIATLGFAEIIRVIITNATSLTNGSLGIKGIPQNATLWWNYGWL 178

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                    ++     + I N  R IRD++ A  ++     F +  +F V + F G+ GA
Sbjct: 179 AFTIIFITLLLQ----SNIGNVLRAIRDDEIASKTMGVNTFFYRSLSFTVGAFFAGIGGA 234

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             AA    I P MF F     ++ IV+ GG+ S++     + I+  ++E    +      
Sbjct: 235 LTAALISTIDPKMFNFLLTFNILMIVVAGGLGSITGSIVGSIIITVMLESLRIIESPLNL 294

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
           S +            +  + L ++IL     LL  R  S
Sbjct: 295 SFIYIP-GIPGLRMVVFSLLLLIIILFWRKGLLGQREFS 332


>gi|330837521|ref|YP_004412162.1| inner-membrane translocator [Spirochaeta coccoides DSM 17374]
 gi|329749424|gb|AEC02780.1| inner-membrane translocator [Spirochaeta coccoides DSM 17374]
          Length = 293

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 65/308 (21%), Positives = 122/308 (39%), Gaps = 40/308 (12%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S+    LI ++   G+ I+ G  GL SL      AIGAY+  +L  ++GL   L   +
Sbjct: 4   LISILTSTLITLIAVIGIYILTGMTGLFSLGQASFMAIGAYTSGLLVVKWGLPFPLACLI 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  ++   G I+GLP+++ R DY+++ TL   E    IL +  P+T G AG         
Sbjct: 64  AIFLAVLVGWIVGLPTVRLRRDYISLVTLGFGEAITAILNRATPLTGGAAGFVGIPPYTS 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                      ++L    +  + +   + +        +R ++ 
Sbjct: 124 FT-------------------------LVLVSAVIIIAAVAMFKVSKFGRQCSALRGDEL 158

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   + + K++AF  S A    +G  +A     + P +F + ++   + +V  GG 
Sbjct: 159 AARAVGINVPWIKMTAFLFSVAVTAYSGCLYAFYTTYVDPSIFGWRKSADWVIMVFFGGS 218

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL+    AT IL G+ E+   +  Y                +      + L+I  +   
Sbjct: 219 GSLTGAVLATFILSGLPEILRFLADY---------------RSIFYAALVLLIINFKPSG 263

Query: 339 LLRLRTPS 346
           LL     +
Sbjct: 264 LLGSWELT 271


>gi|33600472|ref|NP_888032.1| branched chain amino acid ABC transporter [Bordetella
           bronchiseptica RB50]
 gi|33568071|emb|CAE31984.1| Putative branched-chain amino acid transporter membrane protein
           [Bordetella bronchiseptica RB50]
          Length = 337

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 59/323 (18%), Positives = 125/323 (38%), Gaps = 29/323 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
           P+L+ L               ++++ + +FA  ++++VG  GLLSL   + + + AY   
Sbjct: 11  PMLVLLACAMVAPAIVYPIFLMKVMCFAIFACAVNLLVGYAGLLSLGHSMFFGMSAYITA 70

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
                +G      +P + +   A G+I G  +++ +G Y A+ TL ++++     ++   
Sbjct: 71  HTLKVWGWPFEAALPAAVLACSALGLIAGAIAIRRQGIYFAMITLALAQMVYFFCLQAP- 129

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
            T G+ G+    R   LG    +                 +Y V+L +   + ++     
Sbjct: 130 FTGGEDGLQNVPRPVVLGLFDTADDW-------------TLYVVVLAIFLAAVAVYHRAI 176

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            +      + IRDN+    SL   +   KL AF +S+A  G+AG   A      S     
Sbjct: 177 HSPFGEVAKAIRDNEPRAISLGYKVNRYKLLAFVISAALTGLAGGTKALVFQLASLTDVG 236

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           +  +  V+ +V++GGM ++        +++ +      +  +                  
Sbjct: 237 WHISTEVVLMVLVGGMGTIIGPLVGAVLILAMQYYLAPLGEWV---------------MV 281

Query: 323 LMVIALFLVILMRSHSLLRLRTP 345
           +    L  V+++    L+     
Sbjct: 282 IQGAVLVTVVMIFRRGLVGEFEA 304


>gi|121607327|ref|YP_995134.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121551967|gb|ABM56116.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 359

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 58/335 (17%), Positives = 127/335 (37%), Gaps = 11/335 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + ++  LL               S+  ++L++V+      +++G  G++S    + + 
Sbjct: 16  LAVILIAVLLGLALAPFLLPGVKALSVAAKVLVFVVLVASFDLLLGYTGIVSFAHTMFFG 75

Query: 76  IGAYSYVILGSRYGLSIW---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           IGAY   +  +R G +     L +  + ++S    + MGL SL+ R  + A+ TL ++  
Sbjct: 76  IGAYGIAVASTRLGPTWPALALGLGGALLLSLLLSLAMGLFSLRVRAIFFAMITLAVASA 135

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           FQ +  +   IT G+ G+           +         FP   +   +  YY+L     
Sbjct: 136 FQTLASQLPDITGGEDGLTFNLPAL---LSPDFEFFGQPFPGVALDGRLLCYYLLFASAL 192

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +    +L +  +      + IR+N+    ++   ++  +  +  +S+ F  MAGA  A  
Sbjct: 193 VLVLALLRIVNSPFGRVLQAIRENEFRAEAIGYRVVLYRTLSSVLSALFATMAGAMLALW 252

Query: 253 RDRISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYYFN 307
                PD    F   I  + IV++GGM ++      + + +     + +L    +     
Sbjct: 253 LRYNGPDVSLSFEIMIDCLLIVVIGGMGTIYGPVIGSVLFLAAQSYLQDLLRLGSEAASR 312

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                      R    + +   + +      ++  
Sbjct: 313 LPWLSALLSPDRWLLWLGLLFVVSVYYFPSGVVGR 347


>gi|222102153|ref|YP_002546743.1| ABC transporter ATP-binding/permease protein [Agrobacterium
           radiobacter K84]
 gi|221728270|gb|ACM31279.1| ABC transporter ATP-binding/permease protein [Agrobacterium
           radiobacter K84]
          Length = 574

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 54/326 (16%), Positives = 102/326 (31%), Gaps = 38/326 (11%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L   + L    +           L Y + A GL +  G  G LSL   +  AI AY 
Sbjct: 9   LAVLATAMILLPLLAGDLWAYEVSLYLTYGIVATGLGLAWGLSGTLSLGHGLYMAISAYL 68

Query: 81  YV-----ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                  + GS        L  +  M+                    ++ TL ++     
Sbjct: 69  AANVFIVLDGSGLAWPAAFLCALIPMVIAFIIAFGVFKGQTGNATSFSMVTLALALAGGQ 128

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I I W  +T G  G+     L                    +   I  Y ++     +  
Sbjct: 129 IAIGWSSVTGGFNGLLGVPPLP------------------GISGIIEQYALVGAATLVVC 170

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +  +WL    +   W+ +  +++    L       K  AFAVS    G+ G  +A  +  
Sbjct: 171 AGYVWLISAPLGTVWKAVAADERRMQFLGFDTALLKALAFAVSGFCAGLGGVIYAQQQGI 230

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++PD+  F+    ++  V +GG  S+        ++  +         ++          
Sbjct: 231 VTPDLSGFAFCGSLLVYVAVGGRMSVFGPLVGALVVGLLSSELRDRVDWWE--------- 281

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  ++ +   +V+L     L  
Sbjct: 282 ------LVLALVFIVVVLRFPKGLAG 301


>gi|254469518|ref|ZP_05082923.1| inner-membrane translocator [Pseudovibrio sp. JE062]
 gi|211961353|gb|EEA96548.1| inner-membrane translocator [Pseudovibrio sp. JE062]
          Length = 341

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 54/328 (16%), Positives = 108/328 (32%), Gaps = 15/328 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  +AV+  LL      ++  + Y  ++   I I+ +   GL+  +G  G++S      +
Sbjct: 21  IVNIAVMAILLALPLWASSIGEDYYVNLASLITIFAIAGVGLNFAIGQGGMVSFGHAAFF 80

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IG Y+  I           +    A+      +I+ + ++   G        I      
Sbjct: 81  GIGGYTTGIAAFHSFEETLFMAMPFAISGTNQMLIIWIVAMVLCGLAALAIGAISLRTEG 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              I            +      + G    S+      P       +  + +   +   +
Sbjct: 141 VYFIMITLAFAQMIYYFAISWPTYGGEDGLSIYLRNELPMVDAESALTFFLICFILLLGA 200

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L  +    A  T R N+    +        KL+ F +S+   G+AGA FA    
Sbjct: 201 IFVSARLSGSRFGAALGTARMNETRLATSGIDPFPIKLTGFVISAMITGLAGALFAELNG 260

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            + P M  +  +  ++  VILGG+  L       A+ + +         ++         
Sbjct: 261 FVGPSMLSWHRSGEIMVFVILGGVGRLYGPVIGAALFVLLETYIGEWTEHW--------- 311

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   L+  AL  V+L     ++ L
Sbjct: 312 ------QLLLGFALLGVVLFARGGVMGL 333


>gi|206561047|ref|YP_002231812.1| putative amino-acid transport permease [Burkholderia cenocepacia
           J2315]
 gi|198037089|emb|CAR53010.1| putative amino-acid transport permease protein [Burkholderia
           cenocepacia J2315]
          Length = 316

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 97/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +  +   +Y + A G ++V G LG+++        IGA   +   +            
Sbjct: 8   VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPGLGNV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +   I+      +G    +     L  A  +   I    +                
Sbjct: 68  ATLTIGLGIAAVVCAFVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    ++     +   ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFIVMGGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            ++      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|85706504|ref|ZP_01037597.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Roseovarius sp. 217]
 gi|85668916|gb|EAQ23784.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Roseovarius sp. 217]
          Length = 551

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/338 (12%), Positives = 120/338 (35%), Gaps = 31/338 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +++      L  ++  L    F     +   + + G    ++       ++++G+  + S
Sbjct: 100 IDRRPIYWALCLLIIALGPLFFPADMMN--TLMTAGAIFGVFAAINVCWTLIIGTASIFS 157

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L          +    +  +YG+  + L  + + +    G  + +P+L+  G Y A+ TL
Sbjct: 158 LATYAVVGTAGFISSWVSIKYGIPWYFLPFIGSGVGLIFGAAIAIPALRLDGFYYALLTL 217

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++E+ +          +   G             +     F       +   +  YY  
Sbjct: 218 GLNELCRVFFTTSNEFGSASGG-------------LYGASTFVNDTWEPITQSMVTYYSS 264

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN-TTIIFAKLSAFAVSSAFIGMAG 246
             +   +  +   +    +    R   + ++AF +        A+++ F V+S  +G  G
Sbjct: 265 FALLIGALFLFRLIHGKRLGRILRMAPEKREAFAAACGVDYKRARITIFVVTSIALGFIG 324

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
            F++A    I+  +F F   ++ ++++ +GG+         T +++ + ++   +     
Sbjct: 325 GFYSAQYRGIAFSIFGFDTVLLGLAMLAIGGIGKAEGAILGTLVVVFLDKVLLELGP--- 381

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                           ++   +  V+L  ++    ++ 
Sbjct: 382 ------------IRHFMIGALMLGVVLFLNNGYFGIKQ 407


>gi|160900253|ref|YP_001565835.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160365837|gb|ABX37450.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 400

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 71/326 (21%), Positives = 129/326 (39%), Gaps = 30/326 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++  L L        ++ Y       +L Y +   GL+I+ G  G +SL     +AIGA
Sbjct: 85  VLIAALALAACSLVFVAKGYQLFQATMVLAYAVALVGLNILTGYSGQISLGHGAFFAIGA 144

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL- 137
           Y+  IL  R GL+ WL +P + ++S A G + G P+L+  G YLA+AT  +      +L 
Sbjct: 145 YAAGILMDRAGLAYWLAVPAAGLVSLAAGYLFGRPALRLEGLYLALATFALGVAMPQLLK 204

Query: 138 -IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
               +  T G  GI +       G  + +   F+ +  +                     
Sbjct: 205 YRHLEAWTGGVGGIVLTKPEAPWGLPLDADQWFYLYALAVAALL--------------FW 250

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +   L  +    A R IRD+  A  ++       K  AFA+S+ + G+ GA  A +   +
Sbjct: 251 MARNLIDSGSGLALRAIRDHAMAAEAMGVDNAHCKSMAFAISAGYTGVGGALSAIAVQFV 310

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +PD F    +I ++  V++GG+ +L         ++ +  L   ++              
Sbjct: 311 APDSFTMFLSISLLVGVVVGGVGTLWGALFGALFIMFIPGLAEQVSKA------------ 358

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
                 +    L + +      ++ L
Sbjct: 359 --APWAVYGTVLIVFMFAMPGGVMGL 382


>gi|76802352|ref|YP_327360.1| branched-chain/neutral amino acids ABC transporter permease
           [Natronomonas pharaonis DSM 2160]
 gi|76558217|emb|CAI49805.1| ABC-type transport system permease protein II (probable substrates
           branched-chain/neutral amino acids) 4 [Natronomonas
           pharaonis DSM 2160]
          Length = 334

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 63/325 (19%), Positives = 131/325 (40%), Gaps = 22/325 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +     L + L L     + +   + I ++ + + A G ++++G  GLLS      +   
Sbjct: 16  VLGGIGLFVLLALIPATGRGFESFLVIWMMCFAIAALGFNVLLGYTGLLSFGHAAFFGSA 75

Query: 78  AYSYVILGSR-YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           AY+  I   R    S+ +L+  +  ++G  G+ M L +L+    Y A+ TL ++++   +
Sbjct: 76  AYAMAIGMDRLGIESLIVLLVFAVAVAGLLGLAMALLTLRSNEIYFALLTLALAQLVYVV 135

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            ++     +G           FLG  +  L               F YY++L     +  
Sbjct: 136 GVRDIYGLSGGTDGMSVGTPDFLGLGLNELAFNTYMLG-------FYYYIVLLFLAGTIL 188

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++  + R+      + IR+N +        +   +  +  +S+   G+ GA +A    RI
Sbjct: 189 LMWAMLRSPFGLTLKMIRENPERAMMSGVPVERYRTYSMTLSAMITGLGGALYAVQLGRI 248

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +PD   + ++  ++ + +LGGM +        A  IG+ EL      Y+           
Sbjct: 249 TPDQLYWVQSGEIVFMALLGGMGTFFGPIVGAAAFIGLQELTLRFTEYW----------- 297

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
              H  + +I L +V+ +R   +  
Sbjct: 298 ---HFVMGLILLIVVVTLREDGIWG 319


>gi|312795314|ref|YP_004028236.1| branched-chain amino acid transport system permease protein livH
           [Burkholderia rhizoxinica HKI 454]
 gi|312167089|emb|CBW74092.1| Branched-chain amino acid transport system permease protein livH
           [Burkholderia rhizoxinica HKI 454]
          Length = 335

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 110/314 (35%), Gaps = 19/314 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           I +  +   +Y + A G ++V G LG+++        +GA   +   S            
Sbjct: 27  ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAISVLQTHFPGLGNV 86

Query: 94  ----LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
               + + ++A +    G+ +   + +       +A LI +     +L     +  G+  
Sbjct: 87  PTLVIALVIAAAVCACLGITIEKVAYRPLRRAPRLAPLITAIGVSILLQTLAMVIWGRNP 146

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +     +      V          S   +       +++    +  +++L + +T +  A
Sbjct: 147 LSFPQLISTDPINVIKATD----TSPGAVISPTEVVIIVTAFVVMVALLLLVHKTKLGRA 202

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R I +N      +     F   + F + SA   +AG   A+    +   M  F   +  
Sbjct: 203 MRAIAENPNVASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGLKA 261

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ +L        +L  + +L  G    +   ++      +        + L 
Sbjct: 262 FTAAVLGGIGNLGGAMVGGVLLGLIEQLGAGYIGDFTGGVIG-----SNYQDVFAFVVLI 316

Query: 330 LVILMRSHSLLRLR 343
           LV+++R   LL  R
Sbjct: 317 LVLVLRPSGLLGER 330


>gi|163794785|ref|ZP_02188755.1| ABC transporter permease protein [alpha proteobacterium BAL199]
 gi|159180058|gb|EDP64583.1| ABC transporter permease protein [alpha proteobacterium BAL199]
          Length = 316

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 51/287 (17%), Positives = 101/287 (35%), Gaps = 14/287 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++        L       +   M  +I+IY + A  L I++G   ++S        IGA
Sbjct: 14  VLLILFAAVPALANAADLGFATQMVSRIMIYAIAALSLDIILGYGAMVSFGHAAFIGIGA 73

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  I  +       +  P++ +  G   ++ G   L+ RG Y  + TL   ++      
Sbjct: 74  YAVGIASAHDLWDASITFPMAMLGGGLFALVTGAICLRTRGVYFIMITLAFGQMAYFTAS 133

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                                   +    R   F  S +  E   YYV+L          
Sbjct: 134 SLSAYGG--------------DDGLTMWGRSEVFGYSPLENETTFYYVVLACLASCYVFA 179

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L  +        +R+N+    ++       +L A+ ++    G+AGA  A   + +SP
Sbjct: 180 KALVGSRFGRVIVGVRENRLRMQAVGFNPYAYQLVAYVIAGMMAGLAGALLANHTEFVSP 239

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
               +  +  +I +V+LGG  +L          + + E+   +  ++
Sbjct: 240 STMSWQRSGDLIIMVVLGGTGTLHGAILGAVAYLALEEILSHVTEHW 286


>gi|170732232|ref|YP_001764179.1| urea ABC transporter permease protein UrtB [Burkholderia
           cenocepacia MC0-3]
 gi|169815474|gb|ACA90057.1| urea ABC transporter, permease protein UrtB [Burkholderia
           cenocepacia MC0-3]
          Length = 539

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/291 (10%), Positives = 77/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +              +++      +       
Sbjct: 265 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRYAPGAFDWYPLVAVPVSFAVAALVGIV 324

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 325 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 382

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 383 ILPYNRLAILAFALAVVFVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 442

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          +  I     V+LGG+  ++        L    + 
Sbjct: 443 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLASKA 500

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +   +  S  
Sbjct: 501 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAPKGRSAE 538


>gi|315503684|ref|YP_004082571.1| inner-membrane translocator [Micromonospora sp. L5]
 gi|315410303|gb|ADU08420.1| inner-membrane translocator [Micromonospora sp. L5]
          Length = 372

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 48/321 (14%), Positives = 107/321 (33%), Gaps = 13/321 (4%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L        +      +    L++   A G  ++ G  G+LS    + +A G Y   IL 
Sbjct: 52  LPGIFEGPLNSPGTLQLLAICLVFGGLAAGYDLLFGRTGMLSFGHALYFAAGVYGTDILV 111

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           ++ GL +W    ++ +       ++G  +L+  G   A+ TL  +++   ++ +      
Sbjct: 112 TKAGLPLWQAAVLTVIGGTTLAALLGAVALRTVGIAFAMVTLAFAQVGAILVAR------ 165

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                     L      +   +         V   + +Y++ L    +   ++  +  + 
Sbjct: 166 ------DFGGLTGGEEGLPLDVSGLPAALVGVTNTVNLYWLALAYLAIVVLVVHRVSASP 219

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
                  +RD+++    L       KL AF ++       G  +       SP +     
Sbjct: 220 TGRVLAGLRDDERRIGVLGLDPYRFKLVAFTLAGGLASAGGVVYVLIVGGASPHITSSEL 279

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY-YFNSLLKFDCSFNMRHTTLM 324
            + ++ +V+LGG  +         + + +             NSL  F      +   ++
Sbjct: 280 TLSLLVMVVLGGPGTRWGPVLGGVLYMYLDHRLTAFGSSDAVNSLPAFLSHPLSQPLFVL 339

Query: 325 VIALFLVILMRSHSLLRLRTP 345
                L +      L  LR+ 
Sbjct: 340 GTVFILAVYFFPGGLASLRSR 360


>gi|239814513|ref|YP_002943423.1| ABC transporter [Variovorax paradoxus S110]
 gi|239801090|gb|ACS18157.1| ABC transporter related [Variovorax paradoxus S110]
          Length = 595

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 55/323 (17%), Positives = 115/323 (35%), Gaps = 22/323 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A +  ++  L L    +  +  S+   I I  + A GL ++ G  G  S        I 
Sbjct: 8   MAWIAAVVAVLALVPAVAGSFTVSLLNDIGIGALVALGLVLLTGVGGATSFGQAAFVGIA 67

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+   L +  GLS W+ +  + +++G   + +G+ +L+  G +L ++T+        + 
Sbjct: 68  AYATAWLTTTQGLSPWIGLLFALLLTGLSALAIGMLTLRLGGHFLPLSTIAWGLSIAMLF 127

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                +     G+     L              R     +     MYY++  +  L+   
Sbjct: 128 GNVDAL-GRHTGLSNIPAL--------------RIAGWSLADPRSMYYLIWVVVGLACLF 172

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L ++    A R +R       S+       +L+ F  ++ F G+AG  +A     +S
Sbjct: 173 SHNLLQSRPGRAIRGLRGGATLLASVGADAYRVRLTLFVTAALFAGLAGWLYAHMNRFVS 232

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F    +I  + + + GG+  L+      A+++ +      +                
Sbjct: 233 PSPFDVRASIEYLLMAVAGGLGQLAGALVGAALVLVLKNGLQDVLPMLTQRA-------G 285

Query: 318 MRHTTLMVIALFLVILMRSHSLL 340
                       L++      L+
Sbjct: 286 QLEAVAFATLFILLLHFARGGLM 308


>gi|293607219|ref|ZP_06689560.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292814311|gb|EFF73451.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 375

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 50/338 (14%), Positives = 96/338 (28%), Gaps = 32/338 (9%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           +F    A     Y  ++  + + Y M A  L +V G  G+LSL   + +A+G Y++ +  
Sbjct: 42  VFPAGHALHVSAYAVALLGKFMCYAMAALALDLVWGYAGILSLGHGLFFALGGYAHGMYL 101

Query: 86  S---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                                 W   P     +      M L  L               
Sbjct: 102 MRAIGRDGVYQSDLPDFMVFLDWKSYPWYWAYTEHFWYAMLLVVLVPGVLAFVFGYFAFR 161

Query: 131 EIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                    +I            +  D  +          R   F  +       +Y+V 
Sbjct: 162 SRIKGVYFSIITQALTFAAMLLFFRNDTGFGGNNGFTDFKRILGFDITAPSTRATLYWVT 221

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L     +  +   + ++ +      +RD +     +    +  KL  + +S+   G+AGA
Sbjct: 222 LAALAGALILARMVTQSKLGRVLTAVRDAESRLRFIGYDPLGFKLFVWTLSAVLCGIAGA 281

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +      I+P       +I ++  V  GG  +L         + G+             
Sbjct: 282 LYVPQVGIINPSEMSTENSIEMVIWVATGGRGTLIGPIIGAGAVNGLKTW---------- 331

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
               F           + +   LV L     ++ L   
Sbjct: 332 ----FTSVLPEFWLYALGLIFVLVTLFLPTGIVGLARR 365


>gi|170740836|ref|YP_001769491.1| urea ABC transporter permease protein UrtC [Methylobacterium sp.
           4-46]
 gi|168195110|gb|ACA17057.1| urea ABC transporter, permease protein UrtC [Methylobacterium sp.
           4-46]
          Length = 382

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 57/363 (15%), Positives = 112/363 (30%), Gaps = 35/363 (9%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQ--KYIDSMGIQILIYVMFAWGLSI 58
           M++   +   +  +L   AV  P+L    +  + +    Y  S+  + L Y + A  L +
Sbjct: 1   MTLIDRKGWVFLAVLLAFAVAVPVLNLATVEGSAANVPTYAVSLMGKYLCYAILALSLDL 60

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           V G  G+LSL     +A+G Y+  +   R      +                 LP     
Sbjct: 61  VWGYCGILSLGHGAFFALGGYAMGMYLMRQIGPRGVYGHPILPDFMVFLNWKDLPWYWHG 120

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFL 159
            D+   A L++  +   +   +  +                          +  D     
Sbjct: 121 FDWFPFAALMVLLVPGLLAFVFGWLAFRSRVTGVYLSIITQAMTFALMLAFFRNDMGLGG 180

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +        F        + ++ +      L+  +   +  +A       IRD +  
Sbjct: 181 NNGLTDFKDILGFNVQAQGTRVTLFVLTAAALALAYLVARVMTTSAYGKVLIAIRDAESR 240

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L       K+ AF VS+   G+AGA +      I+P  F  + +I  +  V +GG  
Sbjct: 241 TRFLGYRTAHFKVLAFTVSAMMAGVAGALYVPQVGIINPSEFTPANSIEAVIWVAVGGRG 300

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           +L   A    ++     L  G              +       ++     +V L     +
Sbjct: 301 TLVGAALGGVLVNYAKTLLTG--------------AMPDAWLFMLGALFVVVTLFLPRGI 346

Query: 340 LRL 342
           +  
Sbjct: 347 VGT 349


>gi|221211494|ref|ZP_03584473.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia multivorans CGD1]
 gi|221168855|gb|EEE01323.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease protein [Burkholderia multivorans CGD1]
          Length = 316

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 97/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           I +  +   +Y + A G ++V G LG+++        IGA   +   +            
Sbjct: 8   ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPGLGNV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +   I+      +G    +     L  A  +   I    +                
Sbjct: 68  ATLTIGLGIAAVVCAFVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    ++     +   ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFIVMGGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            ++      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|33596706|ref|NP_884349.1| branched chain amino acid ABC transporter [Bordetella parapertussis
           12822]
 gi|33573407|emb|CAE37391.1| Putative branched-chain amino acid transporter membrane protein
           [Bordetella parapertussis]
          Length = 337

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 60/323 (18%), Positives = 126/323 (39%), Gaps = 29/323 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
           P+L+ L               ++++ + +FA  ++++VG  GLLSL   + + + AY   
Sbjct: 11  PMLVLLACAMVAPAIVYPIFLMKVMCFAIFACAVNLLVGYAGLLSLGHSMFFGMSAYITA 70

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
                +G      +P + +   A G+I G  +++ +G Y A+ TL ++++     ++   
Sbjct: 71  HTLKVWGWPFEAALPAAVLACSALGLIAGAIAIRRQGIYFAMITLALAQMVYFFCLQAP- 129

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
            T G+ G+    R   LG    +                 +Y V+L +   + ++     
Sbjct: 130 FTGGEDGLQNVPRPVVLGLFDTADDWK-------------LYVVVLAIFLAAVAVYHRAI 176

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            +      + IRDN+    SL  T+   KL AF +S+A  G+AG   A      S     
Sbjct: 177 HSPFGEVAKAIRDNEPRAISLGYTVNRYKLLAFVISAALTGLAGGTKALVFQLASLTDVG 236

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           +  +  V+ +V++GGM ++        +++ +      +  +                  
Sbjct: 237 WHISTEVVLMVLVGGMGTIIGPLVGAVLILAMQYYLAPLGEWV---------------MV 281

Query: 323 LMVIALFLVILMRSHSLLRLRTP 345
           +    L  V+++    L+     
Sbjct: 282 IQGAVLVTVVMIFRRGLVGEFEA 304


>gi|28870166|ref|NP_792785.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213970652|ref|ZP_03398778.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301382033|ref|ZP_07230451.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302060941|ref|ZP_07252482.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato K40]
 gi|302133928|ref|ZP_07259918.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|28853412|gb|AAO56480.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213924649|gb|EEB58218.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
          Length = 355

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 73/352 (20%), Positives = 143/352 (40%), Gaps = 22/352 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF LR ++      +      +  F+ +    +  +  ++ I  L+  +   GL+++ G
Sbjct: 18  RIFRLRQDR------VALWGLLVFAFVGVPLLGNDYWFSAILIPFLVLSLAGLGLNLLTG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
             G LSL      A+GA++   +     G+ + L   +  ++S A  ++ GLPSL+ +G 
Sbjct: 72  YAGQLSLGSAAFMAVGAFAAYNLQLRVPGMPLLLGFALGGLVSAAVALLFGLPSLRIKGF 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YL ++TL    + + +L ++   TN  A   +      +     S  +            
Sbjct: 132 YLLVSTLAAQFVVEWVLTRFSWFTNDNASGVITSPPLIIAGMNFSSPQG----------- 180

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
              Y + L +  L   +   L R  +   W  +RD   A   +   +  AKL AFA+S  
Sbjct: 181 --RYLLTLALVVLLFWLARNLLRGELGRNWMAVRDMDTAAAVIGIRLFKAKLLAFAISGF 238

Query: 241 FIGMAGAFFA-ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           ++G+AG+ +A A    + P  F  + +  ++ I+I+GG+ S+       A ++    L  
Sbjct: 239 YLGIAGSLWAFAYLGTVEPHGFDLNRSFQILFIIIIGGLGSVQGNFFGAAFIVLFPILLG 298

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            ++      L+      N++   L    +   ++     L RL        R
Sbjct: 299 NLSAQLPVGLIDSGQLENIQKM-LFGALIIAFLIKEPEGLARLWQRFRQRAR 349


>gi|73537614|ref|YP_297981.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72120951|gb|AAZ63137.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 349

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 59/326 (18%), Positives = 129/326 (39%), Gaps = 16/326 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
               Y LLL + + A     Y   + +++L + +FA   ++++G  GLLS      +   
Sbjct: 8   ATFAYGLLLAVLVAAPFLGAYPV-LVMKLLCFALFACAFNLLLGFTGLLSFGHAAFFGGA 66

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+         ++  L + +        G+  G  +++ +G Y A+ TL ++++F    
Sbjct: 67  AYACGYAMKSLHVTPELGLLLGTAFGALLGLAFGALAIRRQGIYFAMITLALAQMFYFFC 126

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++   +T G+ G+    R                F    +  ++  YY++L +   +   
Sbjct: 127 LQAP-VTGGEDGLQAVPRGS-------------LFGVVSLEPDMTTYYLVLAITAAAFLG 172

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           I+ +  +      R I++N+    SL       KL AF +SSA  G+AGA         +
Sbjct: 173 IMRIVNSPFGQILRAIKENEPRAISLGYDADRFKLLAFVLSSALAGLAGALKTLVLGFAT 232

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSF 316
                +  +  VI + ++GGM +LS       +++ +            + + + +  S 
Sbjct: 233 LTDVHWMMSGAVILMTLVGGMGTLSGPIVGALVIVALENKLGDAGTALASLTGIPWFDSL 292

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
               + +  +   + +L     ++  
Sbjct: 293 GESVSMVTGLIFVVCVLTFRRGVMGE 318


>gi|107021988|ref|YP_620315.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054]
 gi|116688932|ref|YP_834555.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
 gi|105892177|gb|ABF75342.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116647021|gb|ABK07662.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 539

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/291 (10%), Positives = 77/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +              +++      +       
Sbjct: 265 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRYAPGAFDWYPLVAVPVSFAVAALVGIV 324

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 325 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 382

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 383 ILPYNRLAILAFALAVVFVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 442

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          +  I     V+LGG+  ++        L    + 
Sbjct: 443 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLASKA 500

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +   +  S  
Sbjct: 501 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAPKGRSAE 538


>gi|153004319|ref|YP_001378644.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5]
 gi|152027892|gb|ABS25660.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5]
          Length = 366

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 69/344 (20%), Positives = 140/344 (40%), Gaps = 19/344 (5%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +   +L L+  V  +       +   + Y+  MG+ + + ++     ++V G  G  
Sbjct: 9   RAPRGFSVLGLVLFVAAVAALWAFPSFVKKPYVLHMGVVLFLAIIQGQAWNVVGGYAGQY 68

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S+     + IGAY   +L     ++ W+ I  +   + A  +++G  + + RG Y  +A+
Sbjct: 69  SVGHAAYFGIGAYVTTMLLELNKIAPWIGIWAAIAAAVALSLVIGSITFRLRGPYFVLAS 128

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           + ++EI +   + +K  T G  G  ++D                         +   Y+ 
Sbjct: 129 ISVAEIIRLAALHFKDFTRGAEGFLLSDIP----------ALKIGATEIEFFTKRPFYFA 178

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            LG+  ++      ++ + +   ++ IR++Q A  SL     F K  A A+S+AF   AG
Sbjct: 179 ALGLAVITIVANYLVQHSKLGYYFQAIREDQDAAHSLGINPAFYKNVALAISAAFTAWAG 238

Query: 247 AFFAASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
            F+A     I P+  F    ++  + I I+GG+ ++        +L+ + E+        
Sbjct: 239 GFYAMFVKFIDPNTVFGLDVSVQFVLICIIGGIGTILGPVIGAMVLVPLSEVLRNPKGLV 298

Query: 306 FNSLLKFDCSF--------NMRHTTLMVIALFLVILMRSHSLLR 341
              +L  D  F        +  H  +  I + +VIL     +L 
Sbjct: 299 QLGILSSDSGFVRFVEANLSNAHLLVYGILVVIVILFAPEGVLG 342


>gi|104783825|ref|YP_610323.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           entomophila L48]
 gi|95112812|emb|CAK17540.1| putative branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas entomophila L48]
          Length = 359

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 100/324 (30%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
           A +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  ALQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      + L  L      L           + +     
Sbjct: 103 DGLPGFMTFLSWSELPWYWAGTQHFAWALCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       S      F  +       ++ + +G+   S  + 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTSFRTILGFDIAAQGTRAVLFLLTVGLLLGSLFLC 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WRLTQSKFGRLLTAVRDAENRLMFCGYDPRGFKLLVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGVVNGMKSW--------------FTVAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     LV L     ++ L
Sbjct: 329 FWLFFLGALFILVTLYLPKGVVGL 352


>gi|121603908|ref|YP_981237.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120592877|gb|ABM36316.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 403

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 50/355 (14%), Positives = 100/355 (28%), Gaps = 37/355 (10%)

Query: 11  YDKILCLLAVVYPLLLFLFLG-----ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +   +  L VV  +   L L      A     Y  ++  +I+ Y + A  + ++ G  G+
Sbjct: 53  WSAFVIALIVVCAVAPVLNLWVPEGHALHLSTYAVALLGKIMCYAICALAMDLIWGYTGI 112

Query: 66  LSLNCVIAYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIM 110
           LSL   + +A+G Y+  +                        W  +P     S +    +
Sbjct: 113 LSLGHGVFFALGGYTMGMYLMRQIGADGNYKSNLPDFMVFLDWKELPWHWTFSDSFVATL 172

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
            L                     + +           A + +  R             F 
Sbjct: 173 ILIVAVPGIVAFVFGYFAFRSRIKGVYFSIITQAMTFAAMLLFFRNETGFGGNNGFTDFK 232

Query: 171 RFPSSFVIYEIFMYYVLL---GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
           R     +        + +              WL  +      + IRD +        + 
Sbjct: 233 RILDIPIATPSMRMTLFVMTGLTLLGFFLFAKWLVGSKFGRVLQAIRDAETRVMFSGYSP 292

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
           +  KL+ + +S+   G+AGA +      I+P     + +I +     +GG  SL      
Sbjct: 293 LGYKLTIWVISAVMCGVAGALYVPQVGIINPGEMSPANSIEIAIWAAVGGRASLIGPIVG 352

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             I+ G                     ++       +      V L   + ++ L
Sbjct: 353 AFIVNGAKSWLT--------------VAYPEFWLYFLGALFIGVTLFLPNGVVGL 393


>gi|115352595|ref|YP_774434.1| inner-membrane translocator [Burkholderia ambifaria AMMD]
 gi|171316759|ref|ZP_02905971.1| inner-membrane translocator [Burkholderia ambifaria MEX-5]
 gi|172061457|ref|YP_001809109.1| inner-membrane translocator [Burkholderia ambifaria MC40-6]
 gi|115282583|gb|ABI88100.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia ambifaria AMMD]
 gi|171098109|gb|EDT42924.1| inner-membrane translocator [Burkholderia ambifaria MEX-5]
 gi|171993974|gb|ACB64893.1| inner-membrane translocator [Burkholderia ambifaria MC40-6]
          Length = 316

 Score = 90.7 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 97/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +  +   +Y + A G ++V G LG+++        IGA   +   +            
Sbjct: 8   VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPGLGNV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +   I+      +G    +     L  A  +   I    +                
Sbjct: 68  ATLTIGLGIAAVVCAFVGFAIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    ++     +   ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFIVMGGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            ++      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|312197074|ref|YP_004017135.1| ABC transporter permease [Frankia sp. EuI1c]
 gi|311228410|gb|ADP81265.1| inner-membrane translocator [Frankia sp. EuI1c]
          Length = 386

 Score = 90.3 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 65/337 (19%), Positives = 129/337 (38%), Gaps = 18/337 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +       + +   A     Y       +  + +   GL++VVG  G  + +    + +G
Sbjct: 18  IVCCVAAAVIVLFLAAYEPDYRLVNYGSVAAWAVALLGLNLVVGYSGQFTFSQSAFFGLG 77

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y   IL S +G      +PV A+     G+++GLP+L+ RG YLAI +  +   F +I+
Sbjct: 78  GYVTAILVSDHGWPFLATLPVVAVAGAVVGLVLGLPALRVRGHYLAIISFALVVAFPSIV 137

Query: 138 I--KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
              + + +T G  G                      +    +    + +  L  +  L  
Sbjct: 138 NMDQLRDLTGGANGKSAFI-----------EWSAPAWFPIAMSDRGWQFLTLAALAVLLF 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++    R+ +  A   +RDN+    +   ++   K SAFA+ SA   + GA        
Sbjct: 187 WLVSNALRSRVGRALMAMRDNEIGAAASGISLALWKASAFAIGSALAALGGAMLLLVVPI 246

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           + PD   F   + +I+ ++LGG  +++  A   A ++ + ++   +             +
Sbjct: 247 VGPDSGGFLVALELITGLLLGGSGTIAGAAIGGAAIVWLPQISQNLAGSLPFLDSNQAPA 306

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR--LRTPSNFLE 350
           F      +    L +VI +    ++    R    FL 
Sbjct: 307 FTN---VVYGAILVVVIFVMPGGIVSFLRRARGRFLP 340


>gi|91978023|ref|YP_570682.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91684479|gb|ABE40781.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 336

 Score = 90.3 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 64/292 (21%), Positives = 125/292 (42%), Gaps = 16/292 (5%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             +++ L +    ++ ++      +LIY +    L+I+ G  G  SL     YA+GAY+ 
Sbjct: 29  VVVVILLCVAPLIAKNFVIFQMTMVLIYAIAVLALNILTGGSGQFSLGQSAFYALGAYTS 88

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL--IK 139
            IL    G++  L +PV+  I    G + GLP+L+  G YLA+AT  ++     +L    
Sbjct: 89  AILMEVGGVNYALTLPVAGGICFIAGYLFGLPALRLSGIYLALATFALATAMPQLLKLHY 148

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           ++  T G  G+ +                        +  ++++YY +L +  +     +
Sbjct: 149 FEAWTGGVQGLVITKPDAPF--------------GLPLSQDMWLYYFVLAVSMVIYVASV 194

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L ++    A   IRDN+ A  ++   +   K  AF VS+   G+AG   A +   ++PD
Sbjct: 195 NLLKSRSGRAMMAIRDNEIAASAMGVDVALYKTLAFGVSAGITGVAGGLGAIAVQFVAPD 254

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +     I +   +++GG+  L       A ++ V  +    +     ++  
Sbjct: 255 SYTIQLAIALFLGMVVGGVGWLPGSIIGAAFIVFVPNIAEQFSKGLSGAVFG 306


>gi|91784958|ref|YP_560164.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91688912|gb|ABE32112.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 316

 Score = 90.3 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 99/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +  +   +Y + A G ++V G LG+++        +GA   +                
Sbjct: 8   VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAIGVLQNHFPGLGNV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + ++ +I+     ++G    +     L  A  +   I    +                
Sbjct: 68  PTLVIALIIAAVVCAVVGYTIERVAYRPLRKAPRLAPLITAIGVSILLQTLAMMIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    +++    +   ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPLNVIKATDTTPGAVISMTEIVIIVVAFLVMGGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      +     F   + F + SA   +AG   A+        M  F   +   +  
Sbjct: 188 AENPGNASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|85704488|ref|ZP_01035590.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. 217]
 gi|85670896|gb|EAQ25755.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. 217]
          Length = 657

 Score = 90.3 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/322 (13%), Positives = 107/322 (33%), Gaps = 26/322 (8%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR- 87
            LG  ++   +        I+ + A GL+I  G +G++++       +GAY+  ++    
Sbjct: 357 ALGLYQTLDLVLDGLSLASIFFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQLFI 416

Query: 88  --YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
             Y +S+ + +P++ +++   G+ M    +        + TL+ +      L +      
Sbjct: 417 PDYTVSLIVALPLAFVVTFGAGVAMERLVI-RHLYTRPLETLLATFGISIALQQLAKNIF 475

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G     +              +      +  V        + +        ++  L+RT 
Sbjct: 476 GTQARPLTAP---------DWLSGALTLNDIVSISNIRVAIFVLALIFLTLLLFILKRTR 526

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +    R +  N     S+        +  F + S   G+AG          S     +  
Sbjct: 527 LGLEVRAVTQNPGMAASMGIDPDRINMLTFGLGSGIAGIAGVAIGLYAQVTSEMGANYIV 586

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
              +  +V    + ++       +++  +              +  F+ S  +   T MV
Sbjct: 587 QSFMTVVVGG--VGNVWGTLAGASMIGFLQ-----------KGIEWFNPSNTLAAQTYMV 633

Query: 326 IALFLVILMRSHSLLRLRTPSN 347
           + + L I  R   ++ L+  + 
Sbjct: 634 LFVILFIQFRPKGIVALKGRAA 655


>gi|331695904|ref|YP_004332143.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326950593|gb|AEA24290.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 351

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 57/310 (18%), Positives = 112/310 (36%), Gaps = 29/310 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                     +   + I  + A  L  ++G  GL SL     + +GAY  V+L  + G  
Sbjct: 55  FVGIDSAQQFLLAYMAIIALLAISLHFLMGIAGLFSLGQAGFFGVGAYVGVVLMDKLGWD 114

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             + +P+ A+     G++M + +L+    YLA+ TL    + +N++     +   +    
Sbjct: 115 GAIALPLVAVAGALVGLLMAVATLRASDLYLALTTLAFGFVGENVVRNIDYLGGAQ---- 170

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                               F    +   + +Y++ LG   +   +I  +RR+ +  A  
Sbjct: 171 ------------GLAGFDLYFFGLTLDDPLLIYWIGLGCLIVFMVMITSMRRSRLGRALM 218

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
             R+   A  S+       +  AF +S AF  +AG+ + A    + P +F       V++
Sbjct: 219 AGREGPIAARSIGVDTGRYRFLAFGLSGAFAAVAGSLYTAYAYVLDPSVFGLGLTTTVLT 278

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           I I+GG+ S+  +  A   L        G              + +          + L 
Sbjct: 279 IAIVGGLRSMPGVLVAAVALTWFRSAVDG-------------EAISEYVLLFYAALVVLT 325

Query: 332 ILMRSHSLLR 341
           +L     +  
Sbjct: 326 LLFLPQGIGG 335


>gi|72384134|ref|YP_293488.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72123477|gb|AAZ65631.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 320

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 61/324 (18%), Positives = 118/324 (36%), Gaps = 28/324 (8%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V  P+++ L         +  ++  +ILI+ +FA  L + +G   + S   V  Y  GAY
Sbjct: 3   VTVPIVIVLAAAPLYLAGFQLTLLTEILIFALFAMSLDLQMGYARMFSFGHVAPYGAGAY 62

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                        W  I +S +I     + +G    +  G   A+ TL ++++   I+ K
Sbjct: 63  IAAFAMMHGCSLPW-SILLSLVIVTILAIPIGWLCTRASGVAFAMLTLAIAQLTFAIVFK 121

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W  +T G  G+    R                F           Y++ LG+      +  
Sbjct: 122 WDKVTGGSDGLSGFIR------------NPGPFGFEGFASREGFYWLALGITVALFLLAR 169

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
              R+ +  A    R++++   ++       ++ AF  S+A   +AGA  A     +SP+
Sbjct: 170 EFVRSPLGTAIVGARESEQRAVAIGYKPRSLRVVAFVASNALASIAGALHAGFLLFVSPE 229

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  +S +  VI  VILGG  +L       A+ +        +   +              
Sbjct: 230 ILHWSLSGHVIIAVILGGTGTLIGPMIGAALFVLAHHELSAVTDSWP------------- 276

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
              +M +    +++     L   +
Sbjct: 277 --LVMGLLFIFIVIAAPQGLWGFK 298


>gi|227326261|ref|ZP_03830285.1| putative branched-chain amino acid transport system, permease
           component [Pectobacterium carotovorum subsp. carotovorum
           WPP14]
          Length = 529

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 84/288 (29%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY+  ++ S         +    +++      +       
Sbjct: 256 ITYGLLGVINMAHGEMLMLGAYATWLVQSLCQQFAPSWLAYYPLLALPVAFFITAGVGMV 315

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      L     + +         +
Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRMLFGTQNLEVANPAWLSGGLRLLPNL 373

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V++ +  +     L L +T +    R +  N+              + AF +
Sbjct: 374 VLPYNRIAVIVFVLGVLLLTWLLLNKTRLGMNVRAVTQNRAMADCCGVPTGRVDMLAFGL 433

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+             I    +V+LGG+  L+    A   L  + ++
Sbjct: 434 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFSLGILNKV 491

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                    ++++ + L I  R   L   +  
Sbjct: 492 LEPQIGAVLGK-------------IVILVLIVLFIQKRPQGLFAFKGR 526


>gi|84501967|ref|ZP_01000125.1| putative branched-chain amino acid transport system permease
           [Oceanicola batsensis HTCC2597]
 gi|84389962|gb|EAQ02596.1| putative branched-chain amino acid transport system permease
           [Oceanicola batsensis HTCC2597]
          Length = 357

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 78/324 (24%), Positives = 135/324 (41%), Gaps = 18/324 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
              + LLL L         Y++S  +  LI+   A GL++V G  G L L      A+GA
Sbjct: 28  LAAFILLLGLAAPFIIPSLYLNSYMLPWLIWTAAALGLNLVTGWAGQLHLGYAAVMAVGA 87

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           YS  I  +R+G+     + +  ++S   G +    +L+ +G YLA+ TL M  +   +L 
Sbjct: 88  YS-AIHAARFGVPWEFALIIGGLMSSVIGSLFAFAALRVKGLYLALTTLAMQFVMDWVLT 146

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               I+ G      +  L                    +  +   YYV  G C L    +
Sbjct: 147 HSPMISGGSHASLQSPTLA--------------LLGQDITSDTGYYYVAFGWCVLVTIFM 192

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-IS 257
           L L+R  +  A   +R+   A   L     + K+ AFA SS   G++GA   A+     +
Sbjct: 193 LNLKRCGLGRALVAVREKDFAAAILGVNSFYYKILAFATSSFIAGVSGALLVATFFFLAA 252

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F  + +I V+++VI+GG+ S+       A+++ V  L  G+       L        
Sbjct: 253 PEQFSVAVSIQVLAMVIVGGLGSIIGSYFGVALILLVPGLVNGLVVSISEGLGMQVNIET 312

Query: 318 MRHT--TLMVIALFLVILMRSHSL 339
           + H    +    + +++L+    L
Sbjct: 313 LAHIPNAVYGALIVVILLIEPLGL 336


>gi|332981087|ref|YP_004462528.1| amino acid/amide ABC transporter membrane protein 1 [Mahella
           australiensis 50-1 BON]
 gi|332698765|gb|AEE95706.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Mahella australiensis 50-1 BON]
          Length = 294

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 55/289 (19%), Positives = 97/289 (33%), Gaps = 10/289 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y IGAY   I  +  GL     + +
Sbjct: 8   LLNGISLGSIYALLALGYTMVYGIINLINFAHGDVYMIGAYIGFIATALLGLGFIPALLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S  IS   GM +   + +   +   IA LI +     +L        G         L  
Sbjct: 68  SMAISALLGMAIEKVAYRPLRNSSRIALLITAIGVSLLLEYTTMYIAGPDTRSFPTVLTN 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +  S           V       Y+L+    L   +   ++RT I  A R +  ++ 
Sbjct: 128 RQYSFMS---------GQVNISSMQLYILIISIILMILLQFIVQRTKIGKAMRAVSMDKD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +     + FA+ SA  G AG       + I P M   +  +      + GG+
Sbjct: 179 AAQLMGINVDTTISATFAIGSALAGAAGILVGIYYNSIDPLM-GITPGLKAFIAAVFGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            S+        +L  +  L  G     +   + F     +       + 
Sbjct: 238 GSIPGAMVGGLLLGMIETLVSGYLDSNYRDAVAFVILIIILLIKPSGLL 286


>gi|27381586|ref|NP_773115.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354754|dbj|BAC51740.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 338

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 67/327 (20%), Positives = 120/327 (36%), Gaps = 26/327 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           LA    L   + L       Y   + + ILI+       S+ +G  GL+SL       IG
Sbjct: 7   LAWAVGLAALVALPFVYRDPYHLHILVLILIWSFAYTSWSM-MGRFGLVSLGHGGFMGIG 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG--DYLAIATLIMSEIFQN 135
           AY   +L +  G S W+ IP+S   +G   +I+G P  +FR    Y  + TL +S I   
Sbjct: 66  AYVTALLWNHLGWSPWIGIPISMAAAGTLALIVGYPCFRFRITGHYFVLVTLALSGIVLQ 125

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           ++   +  T G  G               +     +  +     +   Y + LG+     
Sbjct: 126 VITATRDYTGGSLGYT------------PNRASGNKLLALQFDDKTTWYLIALGVWLFGI 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +  W+ R+    A   I +++ A  +    +   KL    +S+    +AGA +   +  
Sbjct: 174 VVWHWVDRSMSRYALEAISEDEDAAAAAGVDVTAEKLKITLLSALMTALAGAIYCQYQMF 233

Query: 256 ISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           I+PD     + ++ ++   I+GG+           I I + E             + F  
Sbjct: 234 ITPDTVSGIAVSLQMVFAAIVGGLFVSLGPTFGAVITILLAESLR----------IGFGT 283

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + L L I+     +L 
Sbjct: 284 KAVGWDNLVYGVLLVLFIIFLPKGILG 310


>gi|89901941|ref|YP_524412.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89346678|gb|ABD70881.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 309

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 99/305 (32%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G +GL++        +GA +   +      ++      
Sbjct: 8   IINGLVLGSMYALVALGYTMVYGIIGLINFAHGEVLMVGALTSWTIIGWMQEAMPGTPGW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++       +   +L F  + +A   L  S     ++         +    +  +  +
Sbjct: 68  LILLISLIIACVVSATLNFVIEKVAYRPLRDSPRLAPLITAIGMSLLLQTLAMIIWKPNY 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+    F     +       +L       A ++  +  T +  A R   +N +
Sbjct: 128 --KPYPTLLPRTPFEIGGAVITPTQVLILGMTVVSLAVLMWLVNYTKLGRAMRATAENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + F + +    +AG  +AA+   +   M  F   +   +  + GG+
Sbjct: 186 VAALMGVKPDLVISATFVIGAVLAAIAGVMWAANYGTVQHTM-GFLPGLKAFTAAVFGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L  +  L  G        +L      +        I L  V+ +R   
Sbjct: 245 GNLGGAVLGGILLGLIESLGAGYIGTVTGGVLG-----SHYSDIFAFIVLIFVLTLRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|325527364|gb|EGD04721.1| inner-membrane translocator [Burkholderia sp. TJI49]
          Length = 316

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 99/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G LG+++        IGA   +   +        L  V
Sbjct: 8   ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPALGNV 67

Query: 99  SAM-----ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + +     I+      +G    +     L  A  +   I    +                
Sbjct: 68  ATLTIGLGIAAIVCAFVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    ++     +   ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFIVMGGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            ++      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|323498862|ref|ZP_08103845.1| branched-chain amino acid ABC transporter permease [Vibrio
           sinaloensis DSM 21326]
 gi|323315974|gb|EGA69002.1| branched-chain amino acid ABC transporter permease [Vibrio
           sinaloensis DSM 21326]
          Length = 397

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 101/349 (28%), Gaps = 33/349 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +  ++ +    ++         + +  S+  + L Y M A  + +V G LG+LSL   
Sbjct: 30  AILAAVILIPAANMMLSASHPLHVETFTISLLGKYLSYAMLALAVDLVWGYLGILSLGHG 89

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +A+G Y+  +   R      +                 LP      D    A L++  
Sbjct: 90  AFFALGGYAMGMYLMRQIGDRGVYGNPILPDFMVFLNWQELPWFWHGFDQFWFAALMVVL 149

Query: 132 IFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRF 172
           +   +   +  +                          +  +  +     +        F
Sbjct: 150 VPGAMAYVFGYLAFRSRVSGVYLSIITQALTYALMLAFFRNEMGFGGNNGLTDFKDILGF 209

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
                   I ++        +S  +   +  + +      IRD++     +   +   KL
Sbjct: 210 SLQQDSTRIALFIATGIALIVSYLVCRSVVSSRLGRVSVAIRDSESRTRFMGYDVDGIKL 269

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             F +S+   G+AGA +      I+P  F    +I V+  V LGG  +L        ++ 
Sbjct: 270 WVFVLSAVIAGIAGALYVPQVGIINPGEFAPLNSIEVVVWVALGGRATLFGAIVGALVIN 329

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                              F   F       +     L  L     L+ 
Sbjct: 330 YAKSW--------------FTVEFPEVWLFALGGLFVLSTLYFPKGLIG 364


>gi|322373954|ref|ZP_08048489.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus sp. C150]
 gi|321277326|gb|EFX54396.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus sp. C150]
          Length = 294

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 105/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   IY + A G ++V G + L++      Y IGA+      +   ++ W+ +  
Sbjct: 10  LVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYMIGAFVGYYAINSLKMNFWIALVF 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++    G+++   + +   +   I+ LI +      L        G            
Sbjct: 70  SMIVCAILGVVIEFLAYRPLRNSTRISALITAIGVSFFLEYIMVYFVGADTRS------- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+   +    +        +L+    L  ++ L +++T +  A R +  +  
Sbjct: 123 ----FPQSIKMHTYHLGSISVTNVQLLILVVALVLMVALQLIVKKTKMGKAMRAVSVDSD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S+  G AG       + I P M   +  I      +LGG+
Sbjct: 179 AAELMGINVNNTISFTFALGSSLAGAAGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +  L   +               +     ++   L +++L+R   
Sbjct: 238 GIIPGAALGGFVIGILETLSTAIG-------------LSSYRDAIVYGVLIVILLVRPAG 284

Query: 339 LLR 341
           +L 
Sbjct: 285 ILG 287


>gi|251790327|ref|YP_003005048.1| urea ABC transporter permease protein UrtB [Dickeya zeae Ech1591]
 gi|247538948|gb|ACT07569.1| urea ABC transporter, permease protein UrtB [Dickeya zeae Ech1591]
          Length = 525

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 83/288 (28%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++ + +   +   + +  + +      +       
Sbjct: 252 ITYGLLGVINMAHGEMLMLGAYSTWLVQNLFQRLLPDWLALYPLAALPVAFFITAAVGML 311

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
               +     +     + +L  W         + V      L       +         +
Sbjct: 312 LERAI--IRHLYGRPLETLLATWGISLMLIQLVRVLFGTQNLEVANPGWLSGGWSALPNL 369

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V++ +  +     L L +T +    R +  N++             + AF +
Sbjct: 370 VLPYNRIAVMIFVVGVLILTWLLLNKTRLGMNVRAVTQNRRMADCCGVPTGRVDMLAFGL 429

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+ GG+  L+    A   L  + ++
Sbjct: 430 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVTGGVGQLAGTVVAALGLGVLNKV 487

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                     +++ + L I  R   L   +  
Sbjct: 488 LEPQMGAVLGK-------------IAILVLIVLFIQKRPQGLFAFKGR 522


>gi|302874077|ref|YP_003842710.1| inner-membrane translocator [Clostridium cellulovorans 743B]
 gi|307689666|ref|ZP_07632112.1| inner-membrane translocator [Clostridium cellulovorans 743B]
 gi|302576934|gb|ADL50946.1| inner-membrane translocator [Clostridium cellulovorans 743B]
          Length = 291

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 54/307 (17%), Positives = 104/307 (33%), Gaps = 25/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++      Y IGA++     +  GL +   + +
Sbjct: 7   LVNGLALGSVYALLALGYTMVYGIIQLINFAHGEIYMIGAFAGFYSATTLGLPLIPTLLI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++S   G+I+   + K   +   I  LI +     +L     I  G            
Sbjct: 67  AMLVSALAGIIIEKIAYKPLRNSPRITLLITAIGISLLLQNAMRILVGSNPKP------- 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  LI         +  E     + +    L   +   + +T I  A R    + +
Sbjct: 120 ----FPDLINAGVLSIGPIEIEWKTILMFVVSSLLVIVLQFIVYKTKIGKAMRASSQDME 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FAV SA  G++G   A S   I+P M      +      +LGG+
Sbjct: 176 AASLMGINVNNTISFTFAVGSALAGISGVLVAISYPSITPYM-GVMPGLKSFVAAVLGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +  +     G     F+  + F               L  ++L++   
Sbjct: 235 GSIPGSLLGGICIGLLETFSKGYISTKFSDAIVFG-------------VLVAILLIKPSG 281

Query: 339 LLRLRTP 345
           LL  +  
Sbjct: 282 LLGKKNR 288


>gi|86140099|ref|ZP_01058662.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85823194|gb|EAQ43406.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 356

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 51/336 (15%), Positives = 119/336 (35%), Gaps = 9/336 (2%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L +   L+                   +I I+++      +++G  G++S    + + 
Sbjct: 16  LALILGGILICLALAPFLFPGVRTVDTAARICIFIVLVASYDLLLGYGGIVSFAHTMFFG 75

Query: 76  IGAYSYVILGSRYGLSI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           IGAY   +     G       +     A ++ A  +++GL SL+ R  + A+ TL ++  
Sbjct: 76  IGAYGVALTSVHMGRGFDAIAIGALAGAGLAAALALLIGLFSLRVRAIFFAMITLAVASA 135

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF-VIYEIFMYYVLLGMC 191
              ++ +   +T G+ G+                  F        +  ++  YY +    
Sbjct: 136 VAVLVSQLSGLTGGEDGLTFKTPRQLGPAFKFGKEMFDGSLFGVKLNGKLLAYYFVFIGA 195

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L    +L +  +      + IR+N     S+   +++ +++A  +S+A   +AG+ +A 
Sbjct: 196 TLLFLALLRVVNSPFGRVLQAIRENDFRAESIGYRVVYYRVAATCLSAAIAALAGSLYAV 255

Query: 252 SRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY----YF 306
               + PD        I ++ +V++GGM +L        + +        +         
Sbjct: 256 WLRYVGPDTVLSMELMIDILLMVVIGGMGTLYGAMIGATLFVLAQNYLQNLMGAASHLVE 315

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              L  +     R    + +   L +      ++  
Sbjct: 316 GLPLLPELLSADRWLLWLGVLFILSVYFFPTGVVGR 351


>gi|269793035|ref|YP_003317939.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100670|gb|ACZ19657.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 286

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 61/316 (19%), Positives = 114/316 (36%), Gaps = 43/316 (13%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S+     I  +   GL+I  G  G+ SL       IGAY   IL   Y +   L +
Sbjct: 2   DYVLSILSLGAINGIAVLGLAIFTGFTGMFSLGHSAFVGIGAYGSAILTYYYFVPFPLAL 61

Query: 97  PVSAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
              ++++   G+++G P+     R DY AIA L   E F+ ++                 
Sbjct: 62  LAGSLMAALVGLLVGAPALKADLRSDYFAIAILGFGEAFRVLVENLDLTNGA-------- 113

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                                  +        + G   L+ ++     R+ +  +   +R
Sbjct: 114 ------------------RGLPGLEPFSTPAWIFGCLALALALAFNFVRSPLGRSCAAVR 155

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           ++  A      ++   +L + A S+A  G++G   A     + P MF  +++ ++++ VI
Sbjct: 156 EDPVAAQMAGVSLFTVRLCSLAFSAALCGLSGGLMAHYLSFVQPSMFTLTQSTMLLAAVI 215

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
            GGM SL+    A  I + + E                     M       + L  ++++
Sbjct: 216 AGGMGSLTGPLLAAFIFVALPEALR---------------MAQMWRLAAYGLILVAMMVL 260

Query: 335 RSHSLLRLRTPSNFLE 350
           R   L+  R     L 
Sbjct: 261 RPKGLMGYREVWQLLP 276


>gi|187925118|ref|YP_001896760.1| branched-chain amino acid ABC transporter inner membrane protein
           [Burkholderia phytofirmans PsJN]
 gi|187716312|gb|ACD17536.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
          Length = 316

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +  +   +Y + A G ++V G LG+++        +GA   +                
Sbjct: 8   VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAIGVLQNHFPGLGNV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + ++ +I+      +G    +     L  A  +   I    +                
Sbjct: 68  PTLIIALIIAAIVCAAVGYTIERVAYRPLRKAPRLAPLITAIGVSILLQTLAMMIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    +++    +   ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPLNVIKATDTTPGAVISMTEIVIIVVAFLVMGGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      +     F   + F + SA   +AG   A+        M  F   +   +  
Sbjct: 188 AENPGNASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        IL  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVILGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|295095870|emb|CBK84960.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           (TC 3.A.1.4.-) [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 524

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 85/288 (29%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY+  ++       +   + +  +++      +       
Sbjct: 251 ITYGLLGVINMAHGEMLMLGAYATWMVQQVMAQWMPQWLALYPVVALPVAFCLTAGIGMV 310

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      L     + +       + +
Sbjct: 311 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRMTFGAQNLEVANPAWLSGGVQVFANL 368

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                   VL  +  +     L L +T +    R +  N+              + AF +
Sbjct: 369 TLPWNRIVVLGFVLMVLFFTWLILNKTRLGLNVRAVTQNRSMAACCGVPTGRVDMLAFGL 428

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+             I    +V+LGG+  L+    A   L    ++
Sbjct: 429 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGSVAAAFGLGIFNKI 486

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                    L+++A+ L I  R   L  L+  
Sbjct: 487 LEPQMGAVLGK-------------ILILVAIILFIQKRPQGLFALKGR 521


>gi|172065387|ref|YP_001816099.1| inner-membrane translocator [Burkholderia ambifaria MC40-6]
 gi|171997629|gb|ACB68546.1| inner-membrane translocator [Burkholderia ambifaria MC40-6]
          Length = 316

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 97/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +  +   +Y + A G ++V G LG+++        IGA   +   +            
Sbjct: 8   VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPGLGNV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +   I+      +G    +     L  A  +   I    +                
Sbjct: 68  ATLTIGLGIAAVVCAFVGFAIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    ++     +   ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISVTEIVIIAVAFIVMGGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            ++      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 AESPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|315427792|dbj|BAJ49386.1| branched-chain amino acid ABC transporter, permease [Candidatus
           Caldiarchaeum subterraneum]
          Length = 379

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 68/337 (20%), Positives = 130/337 (38%), Gaps = 38/337 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L     L   L +    +   +  +     ++V+ A    ++VG  G+++L       +G
Sbjct: 19  LMGAIALAAVLGVLPFFADDSLVHVLGMTFLFVLLAVSWDLIVGYTGVVNLGLTTFVGLG 78

Query: 78  AYSYVIL--------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
            Y+  +L                   L I   IPV+ +++   G+++GL +L+ +G Y A
Sbjct: 79  GYASALLIERQRLAGSELSFLTEFPPLPIHATIPVAGLVAAFLGLLVGLLTLRLKGWYFA 138

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           + T I+  +F      WK +  G+ G                               I  
Sbjct: 139 LVTAILPLVFMQTTYVWKEVFGGEEGFV--------------------VKVGLGATAIER 178

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           YY  L +  L+ + +L L R+ I   W+ +R+++ A  +L  + +  KL AF VSS   G
Sbjct: 179 YYAALAVLLLTLAGVLVLTRSRIGLRWKALREDEVAAEALGVSTMRYKLLAFVVSSFIAG 238

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           + GA     R   + D++  S  ++VI  V++GG  ++        ++  V         
Sbjct: 239 VVGAMIVHYRMIANNDLYDISLLLLVILAVVVGGQGTIWGPVVGGFLVYTVKNWWLKPLV 298

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           + +     +     +    L+   L +  + R H L 
Sbjct: 299 FGYL----WPMGIPLNDDILLYSILIVFAVARPHGLW 331


>gi|296157150|ref|ZP_06839986.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295892486|gb|EFG72268.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 316

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 99/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +  +   +Y + A G ++V G LG+++        +GA   +                
Sbjct: 8   VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAIGVLQNHFPGLGNV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + ++ +I+     ++G    +     L  A  +   I    +                
Sbjct: 68  PTLVIALIIAAIVCAVVGYTIERVAYRPLRKAPRLAPLITAIGVSILLQTLAMMIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    +++    +   ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPLNVIKATDTTPGAVISMTEIVIIVVAFLVMGGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      +     F   + F + SA   +AG   A+        M  F   +   +  
Sbjct: 188 AENPGNASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|320527723|ref|ZP_08028893.1| amino acid or sugar ABC transport system, permease protein
           [Solobacterium moorei F0204]
 gi|320131888|gb|EFW24448.1| amino acid or sugar ABC transport system, permease protein
           [Solobacterium moorei F0204]
          Length = 317

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 66/322 (20%), Positives = 131/322 (40%), Gaps = 45/322 (13%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +  +  +LL + +     + Y   + I I I V+    L++  G LG L+L      A G
Sbjct: 17  ITALGYILLVILMRIGALKSYWQGILITICINVILTVSLNMTAGFLGELALGHAGFMAAG 76

Query: 78  AYSYVILGSR----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           AY+  +          +   + I +  +++   G+++ LP+L+ RGDYLAI TL   EI 
Sbjct: 77  AYASAVFTKSMRLLPIIEFPVAIIIGGIVAMILGLLVCLPTLRLRGDYLAIITLAFGEIV 136

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           +N+LI  K +                                  I +   +     +  +
Sbjct: 137 RNVLINLKVLGGA--------------------------GGYSAITKNTTFTWAFALAVI 170

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  + L L  +    +   IR+++ A  S        K+  F  S+ F G+ GA +A   
Sbjct: 171 TVFLSLSLIHSRHGRSIIAIREDEIAAESSGINTQKYKIITFLYSAFFAGVGGALYAHYM 230

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             + P +F   ++I ++ +V+LGGM ++     + ++L  + E+   ++ Y         
Sbjct: 231 GFLQPSVFTLDKSIEILVMVVLGGMGNIFGSIVSASVLTLLPEVLRSVSDY--------- 281

Query: 314 CSFNMRHTTLMVIALFLVILMR 335
                    +  + L L++L++
Sbjct: 282 ------RMLVYSVVLILMMLVK 297


>gi|288920144|ref|ZP_06414461.1| ABC transporter related protein [Frankia sp. EUN1f]
 gi|288348475|gb|EFC82735.1| ABC transporter related protein [Frankia sp. EUN1f]
          Length = 963

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 59/315 (18%), Positives = 120/315 (38%), Gaps = 19/315 (6%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              L    +     S  I   I  +    + +V G  G +SL  +      A++   L S
Sbjct: 334 LGVLALLLTDGTWRSAVIGTFIGAVIGLSVVVVTGFAGQVSLAQLALAGCAAFTLSGLTS 393

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +G+   +   ++A+++ A G+++GLP+L+ RG  L I  L ++   + +  +     + 
Sbjct: 394 GWGVPFPVAPLLAALVATAVGVLVGLPALRLRGLTLGIVALALAYAIEAVWFRNSDFVSS 453

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                    L+ L   + S   F R P            + L +    A  +  LR +A+
Sbjct: 454 DGATVEQPTLFGLDLGIGSGHAFPRLPFG---------LMCLAVLVAVAWGVARLRMSAL 504

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
            +A   +R N+++   +   ++  K+ +FA++S   G+ G+  A  R  ++ D F     
Sbjct: 505 GSAMLAVRANERSAAGIGIDVVRVKVISFALASFIAGLGGSLLAYRRGVVTFDSFSAIAG 564

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           + ++S   L G+TS+     A  +    V              +            L  +
Sbjct: 565 LTLLSTAYLAGVTSVYGGILAGVMGGSGVAFV----------AMDRWVDLGDWFPVLSGL 614

Query: 327 ALFLVILMRSHSLLR 341
            +  V++     L  
Sbjct: 615 GVIGVLIGHPEGLAS 629


>gi|218439808|ref|YP_002378137.1| urea ABC transporter permease [Cyanothece sp. PCC 7424]
 gi|218172536|gb|ACK71269.1| urea ABC transporter, permease protein UrtC [Cyanothece sp. PCC
           7424]
          Length = 385

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/354 (13%), Positives = 100/354 (28%), Gaps = 35/354 (9%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++ ++   ++    ++    + + L      ++   +  + L   + A G+ ++ G  GL
Sbjct: 13  VKKHRRRLVIEGAIILGLAFILVVLMPFLLSEFRLKLLGRFLSLCLVALGIDLIWGYTGL 72

Query: 66  LSLNCVIAYAIGAYSYVI-----------------LGSRYGLSIWLLIPVSAMISGACGM 108
           LSL   I +A+G Y   +                  G       W       +   A  +
Sbjct: 73  LSLGHGIFFALGGYGLAMYLNLQLPEGQIPEFFTLYGVTQLPLFWQPFNSFFLTCLAIII 132

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
           I  L +              +                      + +    L         
Sbjct: 133 IPSLVAGLLGYLIFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLK---TDTQT 189

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
            F         ++  Y + + +  L   +  WL         + IRD++           
Sbjct: 190 IFGALVGSSPVQLAFYEITIVLLILIYLLCRWLTSGRFGRLLKAIRDDEIRVRFSGYNPT 249

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRI-SPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
             K+  FA+S A  G++GA +      I        + +I ++  V +GG  +L      
Sbjct: 250 GFKVLVFAISGAIAGISGALYTVQSGIIAPSPSLDVAFSIEMVIWVAVGGRGTLIGAILG 309

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           T ++     L                  F             +V+ +    +L 
Sbjct: 310 TLLVNWGKTLLSE--------------QFPEIWLFFQGALFLIVVTVLPEGILG 349


>gi|254253038|ref|ZP_04946356.1| ABC-type branched-chain amino acid transport system permease
           component [Burkholderia dolosa AUO158]
 gi|124895647|gb|EAY69527.1| ABC-type branched-chain amino acid transport system permease
           component [Burkholderia dolosa AUO158]
          Length = 395

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 49/346 (14%), Positives = 97/346 (28%), Gaps = 32/346 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 52  IAIGIGVPLAALVAPESSAFHLSAYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 111

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                      G    ++ L   
Sbjct: 112 FALGGYAIGMYLMREIGRDGKYGSDLPDFMVFLDWHQLPWYWSGTQHLGWALALVVLVPA 171

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            Y  +  +          R   FP +
Sbjct: 172 VLAWVFGFFTFRSRVKGVYLSIITQALTFAAMLLFYRNETGFGGNNGFTDFKRIAGFPIT 231

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +  +      L+      +  + +      +RD +     L  + +  KL  +
Sbjct: 232 SPGTRTVLLLLTFATLVLAFIAARAIVTSKLGRVVTAVRDGEARLMFLGYSPLAYKLFVW 291

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+   G+AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 292 TVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 351

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            L                  F       + +   LV L+    ++ 
Sbjct: 352 SLFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIVG 383


>gi|218294979|ref|ZP_03495833.1| inner-membrane translocator [Thermus aquaticus Y51MC23]
 gi|218244887|gb|EED11411.1| inner-membrane translocator [Thermus aquaticus Y51MC23]
          Length = 334

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 99/315 (31%), Gaps = 14/315 (4%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY-------VILGS 86
              + I    +   +Y M A G ++V G L L++      + IGA               
Sbjct: 20  LLPQVIFDGFVLGFVYAMVALGYTMVYGVLELINFAHSEIFMIGAVVGVEVFRYLGPHVG 79

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              L + + + +   I+GA  +++   + +          L+       +    + +   
Sbjct: 80  NGYLLLLVALLLGGAIAGATAILVERFAYRPLRKRGTTNRLVPLITAIGVSFILQDLVRL 139

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             G++  +    + T       F  F    +  +     ++L    +   +   + RT +
Sbjct: 140 IEGLWHNEFFLRMRTMEDLEGSFDLF-GGAIFIQTKSLILILVSILMLLGLTYLVNRTKL 198

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A R +  +      +           F +  +  G+AG  FA     +SP +  F   
Sbjct: 199 GVAIRAVAQDLHTASLMGIDPDRIISRTFLIGGSLGGVAGVLFALQYTTVSPYV-GFLPG 257

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I   +  +LGG+ ++        +L  +            +               +  +
Sbjct: 258 IKAFTAAVLGGIGNIPGAMLGGLVLGQLENFFGTYLPILTSGNFG-----TEYKDVVAFL 312

Query: 327 ALFLVILMRSHSLLR 341
            L  ++L R   LL 
Sbjct: 313 ILVFILLARPQGLLG 327


>gi|311108398|ref|YP_003981251.1| urea ABC transporter permease UrtC 2 [Achromobacter xylosoxidans
           A8]
 gi|310763087|gb|ADP18536.1| urea ABC transporter, permease protein UrtC 2 [Achromobacter
           xylosoxidans A8]
          Length = 375

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 49/338 (14%), Positives = 96/338 (28%), Gaps = 32/338 (9%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           +F    A     Y  ++  + + Y M A  L +V G  G+LSL   + +A+G Y++ +  
Sbjct: 42  VFPPGHALHVSAYAVALLGKFMCYAMAALALDLVWGYAGILSLGHGLFFALGGYAHGMYL 101

Query: 86  S---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                                 W   P     +      M L  L               
Sbjct: 102 MRAIGRDGVYQSDLPDFMVFLDWKSYPWYWSFTEHFWYAMLLVVLVPGVLAFVFGYFAFR 161

Query: 131 EIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                    +I            +  D  +          R   F  +       +Y++ 
Sbjct: 162 SRIKGVYFSIITQALTFAAMLLFFRNDTGFGGNNGFTDFKRILGFDITAPGTRAALYWIT 221

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L     +  +   + ++ +      +RD +     +    +  KL  + +S+   G+AGA
Sbjct: 222 LAALAGALILARLVTQSKLGRVLTAVRDAESRLRFIGYDPLGFKLFVWTLSAVLCGIAGA 281

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +      I+P       +I ++  V  GG  +L         + G+             
Sbjct: 282 LYVPQVGIINPSEMSTETSIEMVIWVATGGRGTLVGPIIGAGAVNGLKTW---------- 331

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
               F           + +   LV L     ++ L   
Sbjct: 332 ----FTSVLPEFWLYALGLIFVLVTLFLPTGIVGLARR 365


>gi|317054295|ref|YP_004118320.1| inner-membrane translocator [Pantoea sp. At-9b]
 gi|316952290|gb|ADU71764.1| inner-membrane translocator [Pantoea sp. At-9b]
          Length = 295

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 63/308 (20%), Positives = 124/308 (40%), Gaps = 19/308 (6%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             ++ ++     IY + A  L++  G  GLL+   +    +GAY+  +  S++G S+WL 
Sbjct: 2   SDFLLNIFCLAGIYAVIALALNLQAGYAGLLNFGHIAFVGMGAYAVAL-SSQFGWSLWLA 60

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +P+  + +    ++M     +   DY  IATL ++EI +  +      T G  GI     
Sbjct: 61  LPLGMIAAMLVSLLMATLGRQLAADYWGIATLALAEIIRIAITNEDQYTGGAQGIGAISA 120

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
            +  G   +                +    V++    LS  + + L  +    A R +R+
Sbjct: 121 PWASGVQSQD--------------GLIFGVVIVLAVVLSILVSVRLANSRFGRALRLMRE 166

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
             +    +   + + K  A   S+    +AG   A   +  SPD    SE  ++ S+V++
Sbjct: 167 QPQLAVCMGYALPWLKCRALMCSAVMCSLAGMLLAWYTNYASPDYLLSSETFLIWSMVMI 226

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++  +     ++    E    +  +  + L             L+ I L L +L+R
Sbjct: 227 GGLGNVRGVLLGVLVV----EALYNLIPFAKDYLHFSADLTGALRLGLVGITLLLCLLLR 282

Query: 336 SHSLLRLR 343
              LL  +
Sbjct: 283 PAGLLPEK 290


>gi|239905846|ref|YP_002952585.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
 gi|239795710|dbj|BAH74699.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
          Length = 361

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 54/344 (15%), Positives = 109/344 (31%), Gaps = 8/344 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L      +L    G      Y  S+ + + + ++ A  L+I+ G++G  S       
Sbjct: 8   VPALLACLFGVLLWAAGTGALNVYWQSVLMFMGVNIILATSLNIINGNMGEFSCGHAGFM 67

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GAY   +L         +        S A  +   +         L    + +     
Sbjct: 68  AVGAYVSSLLSVALFTKSQVFGEPLIGPSAAVWLFPLVLIAGALAASLVGLLVAIPSFKT 127

Query: 135 N--ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
               L              + +     G      +       +  I   ++   +     
Sbjct: 128 RGDYLAIITIAAAYIVKSTIENIGAIGGARGFMGMSAVMSAMNETINLPWIMIWVFIGTV 187

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            S  +I     +        I  ++ A   ++      KL AF VS    G+AG  FA  
Sbjct: 188 FSVWLIRRFIYSTFGKGVDAICQDEIAAEIMSVNTDRVKLVAFMVSCGLAGLAGGLFAHI 247

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              ++P  F   ++  ++ +V LGGM SLS    A  ++  ++E       +    L   
Sbjct: 248 LGYVNPGTFTILKSTEIMVMVYLGGMGSLSGSVLAAILMTLLIEYLRDAFGFLNTFLHYI 307

Query: 313 DCSF------NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                      +    ++ + L L++  R   ++  R  ++   
Sbjct: 308 SVIPDSYEVTQVWKWVVIPLLLVLLMQFRPEGIMGRRELADVFP 351


>gi|33596724|ref|NP_884367.1| ABC transporter permease [Bordetella parapertussis 12822]
 gi|33573425|emb|CAE37409.1| Putative ABC transport system, permease protein [Bordetella
           parapertussis]
          Length = 299

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 83/305 (27%), Positives = 140/305 (45%), Gaps = 16/305 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ ++ I +LIY++ A GL++  G  GL++   V  YAIGAY+  +L  + G  +   I
Sbjct: 4   AYLIAIFITVLIYMLLAGGLALQYGFTGLINFGHVGFYAIGAYTSALLSLQGGP-LVACI 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + ++SG     +G+ +L+ RGDYLAI TL  SE  + IL K + +T G  GI    RL
Sbjct: 63  LAATLVSGLSAYPLGVIALRLRGDYLAIVTLGFSESVRMILQKEEWLTRGVHGIPGIPRL 122

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           +                +S  + ++ +   LL    L    I  +  +      + IRDN
Sbjct: 123 F-------------GQYASGAMVDVLILATLLLTNILVFLGIRKIIGSPFGRTIKAIRDN 169

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  +L     + K  +  + +A  G+AGAF A     I+P+ F       V   +I+G
Sbjct: 170 EVAVMALGKNPAWFKTRSLMIGAALAGLAGAFTAHYLTFIAPEQFVPLITFYVWIAIIVG 229

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ SL  +   T IL+  +E    +  + F  + +           ++ + L L IL R 
Sbjct: 230 GVGSLKGVVAGTVILMVFLEGSRFVREFLFFDISE--VQMASLRFFIIGVGLILCILYRP 287

Query: 337 HSLLR 341
           + +  
Sbjct: 288 NGIFG 292


>gi|192362311|ref|YP_001981731.1| putative permease of ABC transporter [Cellvibrio japonicus Ueda107]
 gi|190688476|gb|ACE86154.1| possible permease of ABC transporter [Cellvibrio japonicus Ueda107]
          Length = 383

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 51/347 (14%), Positives = 99/347 (28%), Gaps = 33/347 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++ V    LL           +  ++  + L Y + A  + ++ G  G+LSL     +
Sbjct: 22  LAMVIVPVCNLLIPEGSPLHISTFTVTLLGKFLCYALLALSVDLIWGYCGILSLGHGAFF 81

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+G Y+  +   R                        LP      D    A L++  +  
Sbjct: 82  ALGGYAMGMYLMRQIGPRGQYGDPVLPDFMVFLNWQELPWYWLGFDMFWFAMLMVLLVPG 141

Query: 135 NILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSS 175
            +   +  +                          +  +  +     +        F  S
Sbjct: 142 LLAFVFGWLAFRSRVTGVYFSIITQALTYALLLAFFRNEMGFGGNNGLTDFKDILGFSIS 201

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                I ++     M  L+     ++  + +     +IRD +         +   KL  F
Sbjct: 202 ANGTRISLFLASGVMLILAYLACRYIVTSRMGKIIVSIRDAESRTRFCGYQVESYKLWLF 261

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
             S+   G+AGA +      I+P  F    +I ++  V  GG  +L         +    
Sbjct: 262 VFSAILAGIAGALYVPQVGIINPGEFSPLNSIELVVWVATGGRGTLFGAIVGAFSVNYGK 321

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            L    +                     +     LV L+    L+ L
Sbjct: 322 TLFTSYS--------------PETWLFALGALFVLVTLILPQGLVGL 354


>gi|39936729|ref|NP_949005.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009]
 gi|39650585|emb|CAE29108.1| possible permease of ABC transporter [Rhodopseudomonas palustris
           CGA009]
          Length = 399

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 50/360 (13%), Positives = 107/360 (29%), Gaps = 38/360 (10%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFL------GATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           L++   I  +L     +LL L         A     Y+ S+  + + Y + A  + ++ G
Sbjct: 18  LDRGATIFLVLLAAIGILLPLLNLLTPESSALHVPTYLISLFGKYVCYALLALSIDLIWG 77

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G+LSL     +A+G Y+  +   R   +  +    +            LP   +  D 
Sbjct: 78  YCGILSLGHGAFFALGGYAMGMYLMRQIGTRGVYANPTLPDFMVFLNWKELPWYWYGFDM 137

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162
              A +++  +   +   +  +                          +  D  +     
Sbjct: 138 FWFAAVMVLLVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRNDFGFGGNNG 197

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +        F          ++ +      +   I   +  + +      IRD +     
Sbjct: 198 LTDFKDILGFNVQADGTRAALFMLSCLALAIGFFICRAVVTSKLGKVLIAIRDAESRTRF 257

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   +   KL  F +S+   G+AGA +      I+P  F    +I  +  V +GG  +L 
Sbjct: 258 LGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPSEFAPGNSIEAVIWVAVGGRGTLV 317

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             A    ++     +                         ++      V L+    ++  
Sbjct: 318 GAALGAIVVNYAKTVFTS-------------GPLAPYWLFMLGALFVAVTLLLPKGIVGT 364


>gi|218245209|ref|YP_002370580.1| inner-membrane translocator [Cyanothece sp. PCC 8801]
 gi|218165687|gb|ACK64424.1| inner-membrane translocator [Cyanothece sp. PCC 8801]
          Length = 377

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 67/374 (17%), Positives = 132/374 (35%), Gaps = 63/374 (16%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             YI  +     +Y +FA GL++  G  GL++   V    +GAY+  +L  +    I + 
Sbjct: 8   SGYIVFLATSAGLYAIFALGLNLQWGFTGLINFGVVAFMTMGAYTTALLTLKG-TPIIIA 66

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + + A++S   G+ +GL +L+ R DYLAI T+ +SE+ + I    + +T G  G+     
Sbjct: 67  VLIGAILSAILGLGIGLSTLRLREDYLAIVTIGVSELIRLIANNEEWLTGGTFGVRSYSL 126

Query: 156 L-----------------------------------YFLGTTVRSLIRFFRFPSSFVIYE 180
                                               +     ++      R P S + + 
Sbjct: 127 PLDIEPNFLIKFLLIIALTFLAIYAEWVLCRSLSEQWRQHKQIQGKSYQPRKPISLITWG 186

Query: 181 IFMYYVLLGMCFLSASIILWLR------------------------RTAISNAWRTIRDN 216
           I    ++L +       +                             +      + IR++
Sbjct: 187 IIGTILILLVYIPGIVALSNYTYKAGLMVLILAVLAIIYAGLEFLVHSPWGRILKAIRED 246

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +    +L   ++  KL +F +  A  G+AG+FFA     I P  F+         IV+LG
Sbjct: 247 EDVAKALGKNVLLYKLQSFMLGGAIAGIAGSFFAWQLTTIYPKSFEPLLTFNAWIIVVLG 306

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  S +       I      +   +  Y+    +            ++ + L ++++ R 
Sbjct: 307 GAGSNAGTLLGAIIFWSYDSITRFLLPYFG---IFDQSQAAAFRVMIIGLILMVLMVWRP 363

Query: 337 HSLLRLRTPSNFLE 350
             +L  +      +
Sbjct: 364 QGILGKKEELTLGK 377


>gi|116627275|ref|YP_819894.1| branched chain amino acid ABC transporter permease [Streptococcus
           thermophilus LMD-9]
 gi|116100552|gb|ABJ65698.1| Branched-chain amino acid ABC-type transport system, permease
           component [Streptococcus thermophilus LMD-9]
          Length = 294

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 106/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   IY + A G ++V G + L++      Y IGA+      +   ++ W+ +  
Sbjct: 10  LVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYTIGAFVGYYAINSLKMNFWIALVF 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++    G+++   + +   +   I+ LI +      L        G            
Sbjct: 70  SMIVCAILGVVIEFLAYRPLRNSTRISALITAIGVSFFLEYIMVYFVGADTRS------- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+   +    +        +L+    L  ++ L +++T +  A R +  +  
Sbjct: 123 ----FPQSIKVHTYHLGSISVTNVQLLILVVALVLMVALQLIVKKTKMGKAMRAVSVDSD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +  ++       FA+ S+  G AG       + I P M   +  I      +LGG+
Sbjct: 179 AAELMGISVNNTISFTFALGSSLAGAAGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +  L   +               +     ++   L +++L+R   
Sbjct: 238 GIIPGAALGGFVIGILETLSTAIG-------------LSSYRDAIVYGVLIVILLLRPAG 284

Query: 339 LLR 341
           +L 
Sbjct: 285 ILG 287


>gi|228997068|ref|ZP_04156699.1| Branched chain amino acid ABC transporter, permease [Bacillus
           mycoides Rock3-17]
 gi|228762693|gb|EEM11609.1| Branched chain amino acid ABC transporter, permease [Bacillus
           mycoides Rock3-17]
          Length = 333

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 54/325 (16%), Positives = 120/325 (36%), Gaps = 31/325 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L+           + +  +  Q+ I+ +FA    I++G  G++S    + + IGAY 
Sbjct: 14  LVVLICLSVFPFVNDSRSLLILFTQVFIFAIFAMSFDILLGYTGIVSFGHCMFFGIGAYC 73

Query: 81  YVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +          S  + I ++ ++S     I+G+ SL+ +  + A+ TL +S++F  + 
Sbjct: 74  VALLLDRQEVSIASFLIGIGIAVVLSAIISYIIGMLSLRLKSHFYAMLTLAISQLFFVLA 133

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+  T+G  G        F                         YY+ L    +   +
Sbjct: 134 EKWRSFTHGGDGFTFRVPDMFRDRF-------------------TFYYITLICLVVIFLL 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   I+  K+ A  V+     ++G  F  +   ++
Sbjct: 175 LRLFTQSSIGKVLKAISQNEQRVEALGYKILHYKIIASIVAGVVAALSGGLFVITLRFVN 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L        I+  +      +                
Sbjct: 235 TTVFSIEMTLNALLMTMIGGVGTLVGAIAGAGIIEFLKYYLSELAA---------QYPIF 285

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
            R T  + +   +V+L     L   
Sbjct: 286 ERWTIFLGLLYIIVLLGFPTGLTGT 310


>gi|134096409|ref|YP_001101484.1| putative high-affinity branched-chain amino acid transport system
           permease protein braE [Herminiimonas arsenicoxydans]
 gi|133740312|emb|CAL63363.1| Putative ABC-type branched-chain amino acid transport system,
           permease component [Herminiimonas arsenicoxydans]
          Length = 388

 Score = 90.3 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 64/319 (20%), Positives = 133/319 (41%), Gaps = 20/319 (6%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
                ++  M   +L+Y     GL++  G  G+ +      + IG+Y+  +L +  GL  
Sbjct: 87  FYDSHFVLLMIGGVLLYATACMGLTVQFGFSGVSNFAGAAFFGIGSYTTAVLATHTGLPT 146

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            + I +S +++   G I+  P L+ RG Y A+ T+    I     ++   +  G  G+ V
Sbjct: 147 LVTIAISGIVAAVIGSILIWPVLRTRGHYAALVTIAF-GILFKTFLEVNDVLGGPQGLQV 205

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                F      +   F         + +    + L +      ++  L R+ +  +   
Sbjct: 206 PGMTLFGHAFNDNFTLF----GVEFSFYVNYVLLSLLLFVCVFVLVKALERSWVGLSMDV 261

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +R ++ A  +    I+  K+ AF + + F G+AG+ +      ++P+ F F+++++++SI
Sbjct: 262 VRTDETAASTFGLHIVRWKVIAFTLGNLFAGVAGSIYGMMVGFVAPNNFTFADSLLLLSI 321

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            ILGG+ ++  +  A  I++ + E    +  Y                  L    +  ++
Sbjct: 322 TILGGLGNVIGLIPAAIIVLMLPEKLQFIQEY---------------RVLLYAALVIAIL 366

Query: 333 LMRSHSLLRLRTPSNFLER 351
           L R   LL  +T   F  R
Sbjct: 367 LFRPDGLLPRKTRLFFSRR 385


>gi|332995569|gb|AEF05624.1| branched-chain amino acid ABC transporter permease [Alteromonas sp.
           SN2]
          Length = 392

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 52/348 (14%), Positives = 100/348 (28%), Gaps = 33/348 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
            L    V +  L+F          Y  S+  + L Y + A  + +V G  G+LSL     
Sbjct: 26  FLSTAYVTFCNLVFADGALLHVSDYTVSLFGKYLCYALLALAVDLVWGYCGVLSLGHGAF 85

Query: 74  YAIGAYSYVILGS----------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           + +G Y+  +                         W  IP     S +   ++ +  L  
Sbjct: 86  FTLGGYAMGMYLMRQIGDRGVYGNPDLPDFMVFLNWTEIPWYWAGSSSAIWMVVMVFLGP 145

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG---TTVRSLIRFFRFPS 174
                   TL        + +         A +    R          +      F F  
Sbjct: 146 GLLAFIFGTLAFRSRVSGVYLSIMTQAMTYALMLAFFRNEMGFGGNNGLTDFKEIFGFSL 205

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                ++ ++        +  +I  ++  + +       RD +     +       K+  
Sbjct: 206 QNPSTKLGLFVATAIALAIGYAISHFIVSSKMGRVITATRDAESRVRFVGYKPEHYKVWI 265

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F VS+   G+AGA +      I+P  F    +I ++  V +GG  +L        ++   
Sbjct: 266 FVVSAMLAGLAGALYVPQVGIINPGEFSPLNSIEMVVWVAIGGRCTLYGAIIGAIVVSYA 325

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                           +F           +     LV L+    +  L
Sbjct: 326 KT--------------RFTAIMPEAWLFALGGLFVLVTLLLPKGIAGL 359


>gi|206561445|ref|YP_002232210.1| putative branched-chain amino acid transporter permease
           [Burkholderia cenocepacia J2315]
 gi|198037487|emb|CAR53423.1| putative branched-chain amino acid transport system, permease
           component [Burkholderia cenocepacia J2315]
          Length = 539

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/291 (10%), Positives = 77/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +              +++      +       
Sbjct: 265 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRYAPGAFDWYPLVAVPVSFAVAALVGIV 324

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 325 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVVNPSWMSGGVTVMQNL 382

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 383 ILPYNRLAILAFALAVVVVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 442

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          +  I     V+LGG+  ++        L    + 
Sbjct: 443 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLASKA 500

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +   +  S  
Sbjct: 501 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFAPKGRSAE 538


>gi|300689809|ref|YP_003750804.1| branched-chain amino acid transport system permease, membrane
           component (livM) [Ralstonia solanacearum PSI07]
 gi|299076869|emb|CBJ49482.1| putative Branched-chain amino acid transport system permease,
           membrane component (livM) [Ralstonia solanacearum PSI07]
          Length = 328

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 62/325 (19%), Positives = 131/325 (40%), Gaps = 16/325 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++Y LLL   + A  +  Y   +  ++L +V+FA   ++++G  GLLS      +    
Sbjct: 9   FILYGLLLVALIAAPLAGAYPVFVA-KLLCFVLFASAFNLLLGYTGLLSFGHAAFFGGAG 67

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y    L     L+  L +          G+++GL +++ +G Y A+ TL ++++F    +
Sbjct: 68  YVAGYLMRDLHLTPELGLIAGTAAGALIGLVVGLLAIRRQGIYFAMITLALAQMFYFFCL 127

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +    T G+ G+    R                     +  ++ +YYV+L +   +  +I
Sbjct: 128 QAP-FTGGEDGLQGVPR-------------GKLLGVLDLSSDLTLYYVVLAIVAAAFLLI 173

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           +    +      + I++N+    SL       KL AF +S+A  G+AGA         + 
Sbjct: 174 VRTIHSPFGQILKAIKENEPRAISLGYDTDRFKLLAFVLSAALSGLAGALKTLVLGFETL 233

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-FN 317
               ++ +  VI + ++GG+  LS      A++I +      +  +   +      +   
Sbjct: 234 TDVHWAMSGSVILMTLVGGLGILSGPILGAALVIALENKLGDIGTFLAGATGVDGFNVLG 293

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
              TT+      + +L     ++  
Sbjct: 294 ESVTTVTGAIFVICVLTFRRGIMGE 318


>gi|116255093|ref|YP_770927.1| putative branched chain amino acid ABC transporter permease
           component [Rhizobium leguminosarum bv. viciae 3841]
 gi|115259741|emb|CAK02827.1| putative branched chain amino acid ABC transporter permease
           component [Rhizobium leguminosarum bv. viciae 3841]
          Length = 330

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 58/334 (17%), Positives = 134/334 (40%), Gaps = 31/334 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           + + I   L  +   +L   L      +Y   +G  IL YV+ A   +I+ G  G ++  
Sbjct: 2   RNNSIPFWLLALALPVLAFILPKLGLNEYYLYVGYVILQYVVLATAWNILGGYAGYVNFG 61

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
               + +GAY+ ++L   +G  + + I  +A++    G+  GL +L+ +G + +IAT+  
Sbjct: 62  TGAFFGLGAYTALVLMKAFGAPLPIQIAGAAIVGALLGIGAGLLTLRLKGIFFSIATIAA 121

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           + + +  ++ W+ +        +                    P  F  Y   + +V+  
Sbjct: 122 AIVIETFILNWRFVGGATGMQIIRPE----------------VPLGFDTYTRLLLFVMTV 165

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  ++  +  ++ R+ +      +RD + A        +  +L A A+S A +  AGA F
Sbjct: 166 LTVIAIIVARYIERSWLGRGLHAVRDAEAAAECSGVPTLRLRLIACAISGALMAAAGAPF 225

Query: 250 AASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                 + P   F  + +++ +S+ ++GGM+          ++    +L           
Sbjct: 226 PLYTSFVEPSSTFSLNYSVMALSMAVVGGMSRWWGPVLGAILIASSQQLAAS-------- 277

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 +    H  ++ + + + ++M    L+ L
Sbjct: 278 ------ASPELHLLVVGLLMVIFVIMAPEGLVGL 305


>gi|27375306|ref|NP_766835.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27348442|dbj|BAC45460.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 361

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 52/309 (16%), Positives = 106/309 (34%), Gaps = 12/309 (3%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            +L+   L     Q Y+     +++I  +FA    +V G  G++S    + +    Y   
Sbjct: 43  VVLVAALLAPLVLQDYLTVFATRVIILALFALSFDLVWGYAGIMSFGQALFFGSAGYGVA 102

Query: 83  ILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
           +L     + +I+L++P   +I     +++G   L  R     I   + +        +  
Sbjct: 103 LLARDLDITNIFLVLPAGTIIGLTFALLLGGFLLLGRHPSSVIFVSLGTLTGSYAADRLA 162

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
                  G      +  +            F           YY++LG+  +   +  +L
Sbjct: 163 RGWYYLGGQNGIPSIAPMTLGGYEFSEGPAF-----------YYLVLGILVVVYLLCRFL 211

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R+    A   +R+N++            K   F +     G+AG+ +A     + P+M 
Sbjct: 212 VRSQFGLALAGLRENEQRIAFFGYKAQHLKAIIFTIGGGVAGLAGSLYAFHEGFVWPNMV 271

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
               +  V+  V+ GG  +L        I+ GV           +  +L       +   
Sbjct: 272 GVVVSTQVVLYVLFGGSGTLIGAVIGAIIVEGVSFWLSDNYRDIWPIILGLLLLLVILFR 331

Query: 322 TLMVIALFL 330
            L +I+  L
Sbjct: 332 PLGLISFVL 340


>gi|332285890|ref|YP_004417801.1| ABC transporter permease protein [Pusillimonas sp. T7-7]
 gi|330429843|gb|AEC21177.1| ABC transporter permease protein [Pusillimonas sp. T7-7]
          Length = 327

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 53/302 (17%), Positives = 124/302 (41%), Gaps = 13/302 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +   +  +L+   +      + +    I++  + +FA  L+I++G  G++S    + +  
Sbjct: 11  VGIALVAILILAAIPLLTPSRLVTDFVIRLAAFGVFATSLNILIGYGGMVSFGHAMFFGG 70

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY++ +L  + G+SI L +  + +      +++G   ++ +  Y +  TL  + +  +I
Sbjct: 71  GAYAFGLLMQKAGVSIPLALLGAMVFCALLALVVGAICVRLKEIYFSFLTLAFAMLLYSI 130

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           +  W  +T G  G             +   I    F    +     +Y+    +  +   
Sbjct: 131 IQSWMSLTGGDQG-------------LMGGIPRPVFMGIDLSNGQHLYWFACFLAVVCLL 177

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++  L ++      R +RDN +    L   +   +L AF ++ AF G+AG+  A      
Sbjct: 178 LMRLLMQSPFGYTLRMVRDNPERARFLGVDVWRTRLYAFVLAGAFAGVAGSIMALFVSAA 237

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
            P+   ++ +   I +++LGG+          A+L+   ++       +  +L      F
Sbjct: 238 YPEFAYWTMSGEAIFMILLGGLHVYIGPVVGAALLMMFNDVITRYTDLHGLALGIIVLIF 297

Query: 317 NM 318
            +
Sbjct: 298 AL 299


>gi|257484519|ref|ZP_05638560.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|320324361|gb|EFW80440.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. glycinea str. B076]
 gi|330988868|gb|EGH86971.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331008180|gb|EGH88237.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 355

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 67/328 (20%), Positives = 133/328 (40%), Gaps = 16/328 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +      +  F+ +    +  +  ++ I  L+  +   GL+++ G  G LSL      A+
Sbjct: 27  IGLWSLLVFAFIAVPLLGNDYWFSAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAV 86

Query: 77  GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GA++   +     G+ + L   +  ++S    ++ GLPSL+ +G YL ++TL    + + 
Sbjct: 87  GAFAAYNLQLRVPGMPLLLGFALGGLVSALVALLFGLPSLRIKGFYLLVSTLAAQFVVEW 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L ++   TN  A   +                               Y + LG+  L  
Sbjct: 147 VLTRFSWFTNDNASGVITSPPLI-------------IAGVNFSSPQGRYLLTLGLVVLLF 193

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254
            +   L R  +   W  +RD   A   +   +  AKL AFA+S  ++G+AG+ +A A   
Sbjct: 194 WLARNLLRGELGRNWMAVRDMDTAAAVIGIRLFKAKLLAFAISGFYLGVAGSLWAFAYLG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            + P  F  + +  ++ I+I+GG+ S+       A ++    L   ++      L+    
Sbjct: 254 TVEPHGFDLNRSFQILFIIIIGGLGSVQGNFLGAAFIVLFPILLGNLSALLPVGLIDSGQ 313

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
             N++   L    +   ++     L RL
Sbjct: 314 LENIQKM-LFGALIIAFLIKEPEGLARL 340


>gi|228990981|ref|ZP_04150944.1| Branched chain amino acid ABC transporter, permease [Bacillus
           pseudomycoides DSM 12442]
 gi|228768761|gb|EEM17361.1| Branched chain amino acid ABC transporter, permease [Bacillus
           pseudomycoides DSM 12442]
          Length = 333

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 54/325 (16%), Positives = 120/325 (36%), Gaps = 31/325 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L+           + +  +  Q+ I+ +FA    I++G  G++S    + + IGAY 
Sbjct: 14  LVVLICLSVFPFVNDSRSLLILFTQVFIFAIFAMSFDILLGYTGIVSFGHCMFFGIGAYC 73

Query: 81  YVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +          S  + I ++ ++S     I+G+ SL+ +  + A+ TL +S++F  + 
Sbjct: 74  VALLLDRQEVSIASFLIGIGIAVVLSTIISYIIGMLSLRLKSHFYAMLTLAISQLFFVLA 133

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+  T+G  G        F                         YY+ L    +   +
Sbjct: 134 EKWRSFTHGGDGFTFRVPDMFRDRF-------------------TFYYITLICLVVIFLL 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   I+  K+ A  V+     ++G  F  +   ++
Sbjct: 175 LRLFTQSSIGKVLKAISQNEQRVEALGYKILHYKIIASIVAGVVAALSGGLFVITLRFVN 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L        I+  +      +                
Sbjct: 235 TTVFSIEMTLNALLMTMIGGVGTLVGAIAGAGIIEFLKYYLSELAA---------QYPIF 285

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
            R T  + +   +V+L     L   
Sbjct: 286 ERWTIFLGLLYIIVLLGFPTGLTGT 310


>gi|241766833|ref|ZP_04764652.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
 gi|241362755|gb|EER58542.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
          Length = 355

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 54/336 (16%), Positives = 123/336 (36%), Gaps = 11/336 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +V   L   F           S+  ++L++V+      +++G  G++S    + +
Sbjct: 15  LLAVILVAIFLGLAFAPFLFPGVKALSVAAKVLVFVVLVASFDLLLGYTGIVSFAHTMFF 74

Query: 75  AIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
            IGAY   +  +R      ++ + +  + ++S    + +GL SL+ R  + A+ TL ++ 
Sbjct: 75  GIGAYGIAVATTRMGPTWGALAVGLSGALVLSLLLSLAVGLFSLRVRAIFFAMITLAVAA 134

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            FQ +  +   IT G+ G+          +       F           +  YY+L    
Sbjct: 135 AFQTLASQLSDITGGEDGLTFKVPEILSPSFEPFDDPFLGVSIDG---RLICYYLLFVTA 191

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                 +L +  +      + IR+N+    ++   ++  + ++  +S+ F   AGA  A 
Sbjct: 192 VALVLALLRIVNSPFGRVLQAIRENEFRAEAIGYRVVVYRTTSSVLSALFACCAGAMLAI 251

Query: 252 SRDR-ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYYF 306
                       F   +  + IV++GGM ++   A    + +     + +L    +    
Sbjct: 252 WLRYNGPDTSLSFEIMMDCLLIVVIGGMGTIYGSAIGAVLFLVAQSYLQDLLRVGSEATA 311

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                       R    + +   L +      ++  
Sbjct: 312 GLPWLSALLSPDRWLLWLGVLFVLSVYYFPTGVVGR 347


>gi|257058240|ref|YP_003136128.1| inner-membrane translocator [Cyanothece sp. PCC 8802]
 gi|256588406|gb|ACU99292.1| inner-membrane translocator [Cyanothece sp. PCC 8802]
          Length = 377

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 67/374 (17%), Positives = 132/374 (35%), Gaps = 63/374 (16%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             YI  +     +Y +FA GL++  G  GL++   V    +GAY+  +L  +    I + 
Sbjct: 8   SGYIVFLATSAGLYAIFALGLNLQWGFTGLINFGVVAFMTMGAYTTALLTLKG-TPIIIA 66

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + + A++S   G+ +GL +L+ R DYLAI T+ +SE+ + I    + +T G  G+     
Sbjct: 67  VLIGAILSAILGLGIGLSTLRLREDYLAIVTIGVSELIRLIANNEEWLTGGTFGVRSYSL 126

Query: 156 L-----------------------------------YFLGTTVRSLIRFFRFPSSFVIYE 180
                                               +     ++      R P S + + 
Sbjct: 127 PLDIEPNFLIKFLLIIVLTFLAIYAEWVLCRSLSEQWRQHKQIQGKSYQPRKPISLITWG 186

Query: 181 IFMYYVLLGMCFLSASIILWLR------------------------RTAISNAWRTIRDN 216
           I    ++L +       +                             +      + IR++
Sbjct: 187 IIGTILILLVYIPGIVALSNYTYKAGLMVLILAVLAIIYAGLEFLVHSPWGRILKAIRED 246

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +    +L   ++  KL +F +  A  G+AG+FFA     I P  F+         IV+LG
Sbjct: 247 EDVAKALGKNVLLYKLQSFMLGGAIAGIAGSFFAWQLTTIYPKSFEPLLTFNAWIIVVLG 306

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  S +       I      +   +  Y+    +            ++ + L ++++ R 
Sbjct: 307 GAGSNAGTLLGAIIFWSYDSITRFLLPYFG---IFDQSQAAAFRVMIIGLILMVLMVWRP 363

Query: 337 HSLLRLRTPSNFLE 350
             +L  +      +
Sbjct: 364 QGILGKKEELTLGK 377


>gi|55820453|ref|YP_138895.1| branched-chain amino acid ABC uptake transporter membrane-spanning
           protein [Streptococcus thermophilus LMG 18311]
 gi|55822337|ref|YP_140778.1| branched-chain amino acid ABC transporter permease [Streptococcus
           thermophilus CNRZ1066]
 gi|55736438|gb|AAV60080.1| branched-chain amino acid ABC uptake transporter membrane-spanning
           protein [Streptococcus thermophilus LMG 18311]
 gi|55738322|gb|AAV61963.1| branched-chain amino acid ABC transporter permease protein
           [Streptococcus thermophilus CNRZ1066]
 gi|312277763|gb|ADQ62420.1| Branched-chain amino acid ABC transporter permease protein
           [Streptococcus thermophilus ND03]
          Length = 294

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 106/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   IY + A G ++V G + L++      Y IGA+      +   ++ W+ +  
Sbjct: 10  LVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYMIGAFVGYYAINSLKMNFWIALVF 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++    G+++   + +   +   I+ LI +      L        G            
Sbjct: 70  SMIVCAILGVVIEFLAYRPLRNSTRISALITAIGVSFFLEYIMVYFVGADTRS------- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+   +    +        +L+    L  ++ L +++T +  A R +  +  
Sbjct: 123 ----FPQSIKVHTYHLGSISVTNVQLLILVVALVLMVALQLIVKKTKMGKAMRAVSVDSD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +  ++       FA+ S+  G AG       + I P M   +  I      +LGG+
Sbjct: 179 AAELMGISVNNTISFTFALGSSLAGAAGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +  L   +               +     ++   L +++L+R   
Sbjct: 238 GIIPGAALGGFVIGILETLSTAIG-------------LSSYRDAIVYGVLIVILLLRPAG 284

Query: 339 LLR 341
           +L 
Sbjct: 285 ILG 287


>gi|332525001|ref|ZP_08401185.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2]
 gi|332108294|gb|EGJ09518.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2]
          Length = 523

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/291 (12%), Positives = 90/291 (30%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++   +   +        + +     +        
Sbjct: 249 ITYGLMGVINMAHGELIMIGAYATYVVQGLFRTWLPGAFDWYVVAAIPVAFLASALVGAV 308

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                ++   +     + +L  W         +        +G    + +         +
Sbjct: 309 LER--SVIRFLYGRPLETLLATWGISLILMQTVRSIFGAQNVGVENPAWLSGGVQLLPNL 366

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       +++    + A + L + +T +    R +  N++    +          AF++
Sbjct: 367 VLPYNRLAIIVFAGLVLAGVALLIGKTRLGLFVRGVTQNRRMAACVGVDTARIDTYAFSL 426

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+AG   A S+             +    +V+LGG+  L+    A   L  + +L
Sbjct: 427 GAGIAGLAGC--ALSQVGNVGPDLGQGYIVDSFMVVVLGGVGQLAGTVYAGLGLGVLNKL 484

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             G                       +++ + + I  R   +  L+  S  
Sbjct: 485 LEGWQGAVLAK-------------ITVLVFIVVFIQKRPQGIFALKGRSAE 522


>gi|325529159|gb|EGD06136.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia sp. TJI49]
          Length = 215

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 24/228 (10%)

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVR---------SLIRFFRFPSSFVIYEIFM 183
            + +      +T G  GI    +    G  +          +         S     IF+
Sbjct: 3   IRLLANNLTSLTGGPDGISGIPKPTVFGYEMARSASVDGAKTFHELIGLEYSGDHVVIFL 62

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           Y + L +   +  +   L R  +  AW  +RD++ A  SL       KLSAF + +AF G
Sbjct: 63  YLLALVLVCFTLFVTSRLIRMPMGRAWEALRDDEIACRSLGLNPTRIKLSAFTLGAAFAG 122

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           + GAFFAA +  ++P+ F F E+ ++++IV+LGGM S   +  A  +L  + E+  G   
Sbjct: 123 IGGAFFAARQGLVNPESFTFIESALILAIVVLGGMGSQLGVILAAILLTVLPEVARGFAE 182

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           Y                  +  + + L+++ R   LL    P   L +
Sbjct: 183 Y---------------RMLIFGLVMVLMMMWRPQGLLPASRPHVELPQ 215


>gi|325962599|ref|YP_004240505.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468686|gb|ADX72371.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 430

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/338 (12%), Positives = 98/338 (28%), Gaps = 24/338 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            ++   +  + A    +++            + +     L+  + + GLS++ G+ GL +
Sbjct: 115 FSQTSNLSVIFAFGKGIVVQQQDFGQNLLNRLVAGLSFGLLLALASVGLSLIFGTTGLTN 174

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                   +GA       +        +I                     R     +  +
Sbjct: 175 FAHGEMVTLGAVLVFAFNAIGLPFWLAIILSLLGGGLFGYAQDRGLWRPLRRRGTGLVPM 234

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           ++  I   + +++                +   T      +        V       + L
Sbjct: 235 MIVSIGLALAVRYV-----------IQFYFGGATQQLPYAQSPEIQLGPVSISPNNLWSL 283

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                + A I + L +T +  A R + DN     +    +       +        + G 
Sbjct: 284 GISAVVIALIGIVLLKTRLGKATRAVADNPALAAASGIDVDGVIRLVWITGGMLAALGGI 343

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +A  R  ++ DM      +++ + V LGG+ ++      + I+   VEL          
Sbjct: 344 LWAYYRPGVTFDMGSAIL-LLIFAGVTLGGLGTVFGALIGSIIVGIFVELTTVFGLA--- 399

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                            +  + +V+L R   +L  R  
Sbjct: 400 ---------ADLKYVGALFIMIVVLLFRPQGILGRRER 428


>gi|186475356|ref|YP_001856826.1| inner-membrane translocator [Burkholderia phymatum STM815]
 gi|184191815|gb|ACC69780.1| inner-membrane translocator [Burkholderia phymatum STM815]
          Length = 316

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 100/310 (32%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +  +   +Y + A G ++V G LG+++        +GA   +                
Sbjct: 8   VINGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAIGVLQNHFPGLGNV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + ++ +I+     ++G    +     L  A  +   I    +                
Sbjct: 68  PTLCIALVIAAIVCAVVGYTIERVAYRPLRKAPRLAPLITAIGVSILLQTLAMMIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    +++    + A ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPLNVIKATDTTPGAVISMTEIVIIVVAFLVMAGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      +     F   + F + SA   +AG   A+        M  F   +   +  
Sbjct: 188 AENPGVASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        IL  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVILGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|260888351|ref|ZP_05899614.1| amino acid ABC transporter, permease protein LivH [Selenomonas
           sputigena ATCC 35185]
 gi|260861887|gb|EEX76387.1| amino acid ABC transporter, permease protein LivH [Selenomonas
           sputigena ATCC 35185]
          Length = 314

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 93/303 (30%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GAY      +  GL I   + +
Sbjct: 30  LINGVSLGSIYALIALGYTMVYGIIKLINFAHGDIYMVGAYLGFFAVTNLGLPIVPALIL 89

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I+G  G+++   + K       I+ LI +      L                     
Sbjct: 90  AMIITGLLGIVIEKLAYKPLRHAPRISALISAIGVSLFLEYAMMYFVSPTPRTFPPLF-- 147

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                    +   F    ++       +L   CFL   +   ++ T I  A R    + +
Sbjct: 148 ---------QDVAFSVGSLVINGQQMLILGITCFLMVVLTYIVQYTKIGKAMRAASYDTE 198

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           F + S+   +AG       + I P M      I      +LGG+
Sbjct: 199 TAQLMGINADRVISFTFWIGSSLAAVAGVLVGVYYNSIDPLM-GIMPGIKAFVAAVLGGI 257

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L        IL  V     G     F     F               L LV+L +   
Sbjct: 258 GILPGAVAGGLILGIVEAFVSGFVSSTFRDAAAF-------------AILILVLLFKPAG 304

Query: 339 LLR 341
           L  
Sbjct: 305 LFG 307


>gi|170692050|ref|ZP_02883214.1| urea ABC transporter, permease protein UrtC [Burkholderia graminis
           C4D1M]
 gi|170143334|gb|EDT11498.1| urea ABC transporter, permease protein UrtC [Burkholderia graminis
           C4D1M]
          Length = 398

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 49/349 (14%), Positives = 101/349 (28%), Gaps = 32/349 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             I+  L V +  L+           Y  ++  + + Y + A  L +V G  G+LSL   
Sbjct: 53  LIIVFGLGVPFATLVVPETSPLHLSAYAMTITGKFMCYAIAALALDLVWGYCGILSLGHA 112

Query: 72  IAYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLP 113
           + +A+G Y+  +                                      G   +++ L 
Sbjct: 113 LFFALGGYAIGMYLMRAIGHDGKYGSDLPDFMVFLDWHQLPWYWEGTQHLGYALLLVVLV 172

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
                  +         +     +I            Y  +  +          R   F 
Sbjct: 173 PAVVAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIGGFA 232

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
            +       +  +   +  L+      +  + +      +RD +     L  + +  KL 
Sbjct: 233 ITHPGTRTALLLITFAVLILAFIGARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLF 292

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            + VS+   G+AGA +      I+P       +I +   V +GG  +L         + G
Sbjct: 293 VWTVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNG 352

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                             F  +F       + +   LV L+  + ++ L
Sbjct: 353 AKSF--------------FTANFPEYWLFFLGLIFVLVPLLLPNGIMGL 387


>gi|195970131|ref|NP_387082.2| ABC transporter permease [Sinorhizobium meliloti 1021]
 gi|187904217|emb|CAC47555.2| Putative methionine ABC transporter, permease component
           [Sinorhizobium meliloti 1021]
          Length = 333

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 60/345 (17%), Positives = 130/345 (37%), Gaps = 33/345 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +   I+  + +   L   L         +     ++IL + +FA   ++++G  GLL
Sbjct: 13  RKERSPAIVQTVFLGVGLACLLLAPLFFYPVF----LMKILCFALFACAFNLLLGYTGLL 68

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S      +   AY        +G+   L I +  + +   G ++G  +++ +G Y A+ T
Sbjct: 69  SFGHAAFFGGAAYFTAHAVKEWGVPPELGILLGVVGAALLGAVVGFFAIRRQGIYFAMIT 128

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L ++++F    ++                       ++S+ R        +     MYY 
Sbjct: 129 LALAQMFYFFCLQAGFTRG--------------EDGIQSVPRGHLLGFIDLSQPTNMYYF 174

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +  +  ++I  +  +      ++IR+N+    SL  ++   KL+AF +S+A  G+AG
Sbjct: 175 VLAVFVIGIAMIWRIINSPFGMILKSIRENETRAISLGYSVRNYKLAAFVMSAALTGLAG 234

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
              A      +     +  +  VI + +LGG+ +L        +++ +        F   
Sbjct: 235 GLKALVFQFATLTDVSWQMSGEVILMTLLGGIGTLIGPLFGAGLVVTLQNYLATSEFPV- 293

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                         T +  I   + +L+    ++     S    R
Sbjct: 294 --------------TIITGIVFMVCVLLFRRGIVGEFYNSRLGRR 324


>gi|152994981|ref|YP_001339816.1| inner-membrane translocator [Marinomonas sp. MWYL1]
 gi|150835905|gb|ABR69881.1| inner-membrane translocator [Marinomonas sp. MWYL1]
          Length = 377

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 49/346 (14%), Positives = 95/346 (27%), Gaps = 33/346 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             +      LL           Y  ++  + L Y M A  + I+ G  G+LSL     +A
Sbjct: 28  VTILASAANLLLPADSVFYVSTYTITLLGKYLCYAMLALAVDIIWGYCGILSLGHGAFFA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +G Y+  +   R      +                 LP      D    A L+   I   
Sbjct: 88  LGGYAMGMYLMRQIGDRGVYGNPILPDFMVFLDWKELPWFWLGMDQFWFAMLMAVFIPGL 147

Query: 136 ILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSF 176
           +   +  +                          +  +  +     +        F    
Sbjct: 148 LAFVFGWLAFRSRVTGVYLSIMTQALTYALLLAFFRNEMGFGGNNGLTDFKEILGFSLQA 207

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
               + ++ +   +  +   I   +  +        IRD++     +       K+  F 
Sbjct: 208 DSTRVALFLITAILLAVIFVISQKILSSRFGKVVLAIRDSESRSRFIGYRTDRYKVWLFV 267

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
            S+   G+AGA +      I+P  F    +I ++  V +GG  +L        ++     
Sbjct: 268 YSAVIAGIAGALYVPQVGIINPGEFSPINSIEMVIWVAVGGRGTLIGAVIGALLVNYAKT 327

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         +F           +     LV L     L+ L
Sbjct: 328 --------------RFTAIMPDAWLFALGAMFVLVTLYLPKGLMGL 359


>gi|254441843|ref|ZP_05055336.1| amino acid or sugar ABC transport system, permease protein
           [Octadecabacter antarcticus 307]
 gi|198251921|gb|EDY76236.1| amino acid or sugar ABC transport system, permease protein
           [Octadecabacter antarcticus 307]
          Length = 630

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/311 (13%), Positives = 94/311 (30%), Gaps = 26/311 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLI 96
                   IY + A GL+I  G +G++++       +GAY+  ++          I + +
Sbjct: 341 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGFVVQQIVPDYTLSIIIAL 400

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P +  ++ A G+ M    +     +  + TL+ +     +L +      G     +    
Sbjct: 401 PTAFAVTFAAGVAMERLVI-RHLYHRPLETLLATFGIAIVLQQLAKNIFGTQARPLTSP- 458

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     +      +  +        +          I+  L+RT +    R +  N
Sbjct: 459 --------DWLAGAWVVNDVIQISTIRIAIFALALLFLGLILYILKRTRLGLEVRAVTQN 510

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                S+        +  F + S   G+AG          S     +             
Sbjct: 511 PGMAASMGINPDRINMLTFGLGSGIAGIAGVAIGLYAKVTSEMGADYIVQ---------- 560

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
              S   +       +        +  +    +  F+ S  +   T M++ + L I  R 
Sbjct: 561 ---SFMTVVVGGVGNVWGTLAGASLIGFTQKGIEFFNPSNTLAAQTYMILFVILFIQFRP 617

Query: 337 HSLLRLRTPSN 347
             ++ L+  + 
Sbjct: 618 KGIVALKGRAA 628


>gi|315651970|ref|ZP_07904972.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Eubacterium saburreum DSM
           3986]
 gi|315485799|gb|EFU76179.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Eubacterium saburreum DSM
           3986]
          Length = 293

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 102/306 (33%), Gaps = 25/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G   +++        +GAY+     S  GL + + + +
Sbjct: 9   LINGLRTGSIYALIAIGYTMVYGIAKMINFAHGDIIMVGAYALYFSISVLGLPVPIALLI 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I G  G+++   + K       +A LI +      L     +  G            
Sbjct: 69  TVIICGVLGVMIEKVAYKPLRSAPPLAVLITAIGMSFFLQSASLLIFGST---------- 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                +S+I         V+        L+        + L++ +T + +A R + +++ 
Sbjct: 119 -PIPFQSVIPNVNISIGPVVISSITVVTLIVTAIAMILLTLFVNKTKLGSAMRAVSEDKG 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA   +AG  +      +          I      +LGG+
Sbjct: 178 AAELMGINVNSTISMTFAIGSALAAVAGVLYICQYQSM-KPTLGALPGIKAFVAAVLGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L  +  +            + F               L +V+L R   
Sbjct: 237 GSIPGAMIGGILLGLIESVSKAYISTELADAIVFG-------------VLIVVLLFRPSG 283

Query: 339 LLRLRT 344
           LL  + 
Sbjct: 284 LLGKKK 289


>gi|300314069|ref|YP_003778161.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300076854|gb|ADJ66253.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 326

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 50/302 (16%), Positives = 121/302 (40%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS           Y        +GL   L + +  +
Sbjct: 25  FLMKMLCFALFACAFNLLIGYTGLLSFGHAAFLGWAGYMCGQALKVWGLPTELGLIIGTL 84

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
                G++MGL +++ +G Y  + TL ++++   + ++    T G+ G+    R      
Sbjct: 85  TGALIGLVMGLLAIRRQGIYFTMITLALAQMLFFVALQAP-FTGGEDGLQGVPR------ 137

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                          +  ++ +YYV+L +     ++I+    +      + I++N+    
Sbjct: 138 -------GKLLGFLNLESDMTLYYVVLAIAVAGFALIVRTIHSPFGQVLKAIKENEPRAI 190

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   KL AF +S+   G+AGA         +     +S + +V+ + ++GG+ ++
Sbjct: 191 SLGYDVARYKLLAFVLSAGLSGLAGATKTLVLGFETLTDVHWSMSGLVVLMTLVGGLGTI 250

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSL-LKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                   I+I +      +  +  +   + +  +     T +      + +L     ++
Sbjct: 251 LGPIVGAVIIIMLENKLGDIGAWLASVTHIDWFNTLGDSVTIVTGFIFIVCVLAFRKGIV 310

Query: 341 RL 342
             
Sbjct: 311 GE 312


>gi|33600490|ref|NP_888050.1| ABC transporter permease [Bordetella bronchiseptica RB50]
 gi|33568089|emb|CAE32002.1| Putative ABC transport system, permease protein [Bordetella
           bronchiseptica RB50]
          Length = 299

 Score = 89.9 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 82/305 (26%), Positives = 139/305 (45%), Gaps = 16/305 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ ++ I +LIY++ A GL++  G  GL++   V  YAIGAY+  +L  +    +   I
Sbjct: 4   AYLIAIFITVLIYMLLAGGLALQYGFTGLINFGHVGFYAIGAYTSALLSLQGVP-LVACI 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + ++SG     +G+ +L+ RGDYLAI TL  SE  + IL K + +T G  GI    RL
Sbjct: 63  LAATLVSGLSAYPLGVIALRLRGDYLAIVTLGFSESVRMILQKEEWLTRGVHGIPGIPRL 122

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           +                +S  + ++ +   LL    L    I  +  +      + IRDN
Sbjct: 123 F-------------GQYASGAMVDVLILATLLLTNILVFLGIRKIIGSPFGRTIKAIRDN 169

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  +L     + K  +  + +A  G+AGAF A     I+P+ F       V   +I+G
Sbjct: 170 EVAVMALGKNPAWFKTRSLMIGAALAGLAGAFTAHYLTFIAPEQFVPLITFYVWIAIIVG 229

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ SL  +   T IL+  +E    +  + F  + +           ++ + L L IL R 
Sbjct: 230 GVGSLKGVVAGTVILMVFLEGSRFVREFLFFDISE--VQMASLRFFIIGVGLILCILYRP 287

Query: 337 HSLLR 341
           + +  
Sbjct: 288 NGIFG 292


>gi|33602765|ref|NP_890325.1| putative branched-chain amino acid transport permease [Bordetella
           bronchiseptica RB50]
 gi|33577207|emb|CAE35764.1| putative branched-chain amino acid transport permease [Bordetella
           bronchiseptica RB50]
          Length = 326

 Score = 89.9 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 56/336 (16%), Positives = 132/336 (39%), Gaps = 23/336 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +N+        A++  +L ++ +             ++++ Y +FA   ++++G  GLLS
Sbjct: 1   MNRQLLGYAAFAIIVGILPYVGVYPIF--------AMKVMCYALFACAFNLLLGYTGLLS 52

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                     AY+       +GL   L +     ++   G+ MG  +++  G Y A+ TL
Sbjct: 53  FGHAAFLGSAAYAAGHALKVWGLPTELGLAFGVAVAALLGLAMGALAIRRSGIYFAMITL 112

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++++     ++    T G+ G+    R                  +  +  ++ +YYV+
Sbjct: 113 ALAQMVFFFFLQA-HFTGGEDGLQGVPRGT-------------LLGTIDLRNDLNLYYVV 158

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +G+  L   +I     +      + +R+N+    SL   +   KL AF +S+A  G+AGA
Sbjct: 159 MGIFALGYFVIWRTVHSPFGQVLKGLRENEPRAISLGYDVDRFKLVAFVLSAAIAGLAGA 218

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
                    +     +  + +VI + ++GG+ +L+       I++ +             
Sbjct: 219 TKTLVFVSATLSDATWQMSGLVILMTLIGGLGTLTGPILGAFIVVLLENKVGDFGQMLTR 278

Query: 308 -SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            + L +        T ++ +   + ++     ++  
Sbjct: 279 LTGLDWFLRLGESVTIVIGLIFVVCVMAFRRGIVGE 314


>gi|33594442|ref|NP_882086.1| putative branched-chain amino acid transport permease [Bordetella
           pertussis Tohama I]
 gi|33564517|emb|CAE43832.1| putative branched-chain amino acid transport permease [Bordetella
           pertussis Tohama I]
 gi|332383853|gb|AEE68700.1| putative branched-chain amino acid transport permease [Bordetella
           pertussis CS]
          Length = 325

 Score = 89.9 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 58/336 (17%), Positives = 131/336 (38%), Gaps = 24/336 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +N+        A+V  +L ++ +             ++++ Y +FA   ++++G  GLLS
Sbjct: 1   MNRQLLGYAAFAIVVGILPYVGVYPIF--------AMKVMCYALFACAFNLLLGYTGLLS 52

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                     AY+       +GL   L +     ++   G+ MG  +++  G Y A+ TL
Sbjct: 53  FGHAAFLGSAAYAAGHALKVWGLPTELGLAFGVAVAALLGLAMGALAIRRSGIYFAMITL 112

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++++    L      T G+ G+    R                  +  +  ++ +YYV+
Sbjct: 113 ALAQMVFFFLQ--AHFTGGEDGLQGVPRGT-------------LLGTIDLRNDLNLYYVV 157

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +G+  L   +I     +      + +R+N+    SL   +   KL AF +S+A  G+AGA
Sbjct: 158 MGIFALGYFVIWRTVHSPFGQVLKGLRENEPRAISLGYDVDRFKLVAFVLSAAIAGLAGA 217

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
                    +     +  + +VI + ++GG+ +L+       I++ +             
Sbjct: 218 TKTLVFVSATLSDATWQMSGLVILMTLIGGLGTLTGPILGAFIVVLLENKVGDFGQMLTR 277

Query: 308 -SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            + L +        T ++ +   + ++     ++  
Sbjct: 278 LTGLDWFLRLGESVTIVIGLIFVVCVMAFRRGIVGE 313


>gi|325526280|gb|EGD03893.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia sp. TJI49]
          Length = 394

 Score = 89.9 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 52/347 (14%), Positives = 105/347 (30%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   + V    L+     A     Y  ++G +++ Y + A  L +V G  G+LSL   + 
Sbjct: 51  VAIGIGVPLAALVAPESSAFHLSAYAMTLGGKLMCYAIAALALDLVWGYCGILSLGHGLF 110

Query: 74  YAIGAYSYVILGSRYG----------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           +A+G Y+  +   R                + +    +     G      +L       A
Sbjct: 111 FALGGYAIGMYLMREIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTQHLAVALLLVVVVPA 170

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT--------VRSLIRFFRFPSS 175
           +   +         +K   ++     +  A  L F                 R   FP +
Sbjct: 171 VLAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIAGFPIT 230

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  ++ +      L+      +  + +      +RD +     L  + +  KL  +
Sbjct: 231 SPGTRTVLFLLTFATLVLAFVAARAIVASKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 290

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
             S+   G+AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 291 TASAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 350

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                               F       + +   LV L+    ++ L
Sbjct: 351 SFFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIVGL 383


>gi|187477585|ref|YP_785609.1| ABC transporter permease [Bordetella avium 197N]
 gi|115422171|emb|CAJ48695.1| ABC transporter, permease protein [Bordetella avium 197N]
          Length = 327

 Score = 89.9 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 54/333 (16%), Positives = 128/333 (38%), Gaps = 15/333 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++      + +GA           ++++ Y +FA   ++++G  GLLS          AY
Sbjct: 5   LLGYAAAVIVVGALPFLGVYPIFVMKVMCYALFACAFNLLLGYTGLLSFGHAAFLGSAAY 64

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +       +G    L +    +++   G+ MG  +++  G Y A+ TL ++++     ++
Sbjct: 65  ATGQALKVWGWPTELGLLFGVVVAALLGLAMGALAIRRSGIYFAMITLALAQMVFFFFLQ 124

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
               T G+ G+    R                     +  +I +YY+++ +  +   II 
Sbjct: 125 A-KFTGGEDGLQGVPR-------------GKALGFIDLSQDINLYYLVMVLFIIGYFIIW 170

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
               +      + +R+N+    SL       KL AF +S+A  G+AG+         +  
Sbjct: 171 RTVHSPFGQVLKGLRENEPRAISLGYDTDRFKLLAFVLSAAIAGLAGSAKTLVFVSATLS 230

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318
              +  + +VI + ++GGM +L+       +++ +         +  N + + +      
Sbjct: 231 DATWQMSGLVILMTLVGGMGTLTGPIIGAFVVVLLENKVGDFGQFMANLTGMDWFLRLGE 290

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             T ++ +   + ++     L+   +      R
Sbjct: 291 SVTIVIGLIFVICVMAFRRGLVGEFSAWLERRR 323


>gi|307315823|ref|ZP_07595334.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
 gi|307322579|ref|ZP_07601920.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|306891770|gb|EFN22615.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|306898532|gb|EFN29208.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
          Length = 330

 Score = 89.9 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 60/345 (17%), Positives = 130/345 (37%), Gaps = 33/345 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +   I+  + +   L   L         +     ++IL + +FA   ++++G  GLL
Sbjct: 10  RKERSPAIVQTVFLGVGLACLLLAPLFFYPVF----LMKILCFALFACAFNLLLGYTGLL 65

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S      +   AY        +G+   L I +  + +   G ++G  +++ +G Y A+ T
Sbjct: 66  SFGHAAFFGGAAYFTAHAVKEWGVPPELGILLGVVGAALLGAVVGFFAIRRQGIYFAMIT 125

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L ++++F    ++                       ++S+ R        +     MYY 
Sbjct: 126 LALAQMFYFFCLQAGFTRG--------------EDGIQSVPRGHLLGFIDLSQPTNMYYF 171

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +  +  ++I  +  +      ++IR+N+    SL  ++   KL+AF +S+A  G+AG
Sbjct: 172 VLAVFVIGIAMIWRIINSPFGMILKSIRENETRAISLGYSVRNYKLAAFVMSAALTGLAG 231

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
              A      +     +  +  VI + +LGG+ +L        +++ +        F   
Sbjct: 232 GLKALVFQFATLTDVSWQMSGEVILMTLLGGIGTLIGPLFGAGLVVTLQNYLATSEFPV- 290

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                         T +  I   + +L+    ++     S    R
Sbjct: 291 --------------TIITGIVFMVCVLLFRRGIVGEFYNSRLGRR 321


>gi|261753388|ref|ZP_05997097.1| high-affinity branched-chain amino acid transport system permease
           [Brucella suis bv. 3 str. 686]
 gi|261743141|gb|EEY31067.1| high-affinity branched-chain amino acid transport system permease
           [Brucella suis bv. 3 str. 686]
          Length = 588

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 102/251 (40%), Gaps = 25/251 (9%)

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            W  + + A I+   GM++  P  + +G + ++A++   E+F+ + + +  +T G  G+ 
Sbjct: 74  PWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLALHFGWLTGGATGLM 133

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           +  +L ++    R                     ++ GM  ++ +I   +RR+ +     
Sbjct: 134 IQLKLGWVWIVFRERW--------------PSLLIVFGMLLVTLAITWAVRRSRLGFYLV 179

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENIIVI 270
             R+ + A  +     +  +L A A+SSA   M G F A     I P  MF  + +I + 
Sbjct: 180 ATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIEPAAMFSLAFSIQIA 239

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
              ++GG+ +++       +L+ + E            L  F          +  + L L
Sbjct: 240 MFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF----------VYGLVLIL 289

Query: 331 VILMRSHSLLR 341
           V+L   + ++ 
Sbjct: 290 VVLFMPNGIMG 300


>gi|146339294|ref|YP_001204342.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146192100|emb|CAL76105.1| putative ABC transporter permease protein [Bradyrhizobium sp.
           ORS278]
          Length = 353

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 57/336 (16%), Positives = 122/336 (36%), Gaps = 19/336 (5%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +    +    +   +++   +      +        IL  ++ A   +++ G  GL+S+
Sbjct: 12  TRTKASIVFAVIAALIVVAGVIAPAYLPRSTLQDLFFILTMLVLAQSWNLLAGYAGLVSV 71

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                  +GAY+         L   + + +    +    +  G  + + +G Y AI T +
Sbjct: 72  GQQAFVGLGAYAMFAGVVLLKLDPLVSVLLGGAAAALLAIPAGFFAFRLQGAYFAIGTWV 131

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           ++EI + ++ +WK +  G                   +++           +I  Y++ L
Sbjct: 132 VAEIVRLLVAQWKTLGGGTG--TSLPGAATRAMFGTDVVQRLLGVRPAQAVDIICYWLAL 189

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +   +   +  L R+    A  ++RDNQ+A  ++       K   +  S+A  G+ GA 
Sbjct: 190 LLAVATIFTVYRLLRSRHGLALASVRDNQEAARAIGVDARRLKAMVYLTSAALTGLVGAL 249

Query: 249 FAASRDRISPDMFK--FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
               + RISPD           VI IV++GG+ ++        I  G+ +L         
Sbjct: 250 IYVQKARISPDAAFSVIDWTAYVIFIVVIGGIGTIEGPIVGVLIFFGLQKLLA------- 302

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                    F   +   + +   +++L     L  L
Sbjct: 303 --------DFGSLYLLALGLIGIVIMLFAPQGLWGL 330


>gi|119387721|ref|YP_918755.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119378296|gb|ABL73059.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 333

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 62/326 (19%), Positives = 118/326 (36%), Gaps = 29/326 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   V          A+  Q ++  +    LI  + A  L ++ G+ GLLS      Y 
Sbjct: 17  LVGLAVIAATGLCLPFASAGQPFLLMLASHALIAAILALSLDMLTGNTGLLSFGHAAWYG 76

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            GAY   +L       I +LI ++   +      +G   ++  G   AI TL +S+I   
Sbjct: 77  FGAYVAGLLSKSVSSDIAVLILLTLAATLLVSGAVGAILVRQVGKTFAILTLALSQIMFA 136

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           ++  +  IT G+ G+       F                + ++     Y +LLG   L+ 
Sbjct: 137 LVFVFSDITGGEDGLQGIPMATFF--------------GAQIVSPATWYAILLGALLLAL 182

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +  L +R   +  AW  IR+N +    +   +   KL ++ +S++   +AG  F      
Sbjct: 183 AGALHIRHAPLGRAWLAIRENSERARFIGMNVTLLKLISYMISASLASLAGLLFVLFNGA 242

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            SPD+  + E+  V+  V+LGG+ ++        +              +          
Sbjct: 243 TSPDLLHWLESGKVLMYVVLGGVGTIFGPVIGAVVFTLAEHYVSSFTDAW---------- 292

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                         L++++    L  
Sbjct: 293 -----LIYFGALFVLIVIVAPGGLFG 313


>gi|328955201|ref|YP_004372534.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Coriobacterium glomerans PW2]
 gi|328455525|gb|AEB06719.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Coriobacterium glomerans PW2]
          Length = 357

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 74/347 (21%), Positives = 141/347 (40%), Gaps = 27/347 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M   + R    D +   + VV   L      A    + +    + I  Y++ A  L++VV
Sbjct: 1   MRFLNNRRTASDLLTYAIVVVAFALTTAAQAAHMVPRSLAGQLVPISCYIVMAVSLNLVV 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLP 113
           G  G LSL      +IGA++ ++  +          + + L + V A  +   G ++G+P
Sbjct: 61  GISGELSLGHAGFMSIGAFTGIMCAAGLARAIPAPEIRLALAMVVGAGFACIAGFLIGIP 120

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD-----RLYFLGTTVRSLIR 168
            ++ RGDYLAI TL   EI + ++       +      + +      +  L         
Sbjct: 121 VMRLRGDYLAIVTLAFGEIIKELINCLLVGVDSDGVHVLINVSGTLGVRDLHLAAGGQAI 180

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                 +    +I  +     +  ++  +I  L R+    A   +RDN+ A  S+  ++ 
Sbjct: 181 IKGAQGASGTEKIATFAAGFVLVMVALVVIQNLVRSRTGRAIMAVRDNRIAAQSVGISVT 240

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
             ++ AF V++A  G +GA F  +  ++S   F F+ +I+V+  V+LGG+ S+     A 
Sbjct: 241 KYRMIAFVVAAALAGASGALFGCNFTQLSASKFGFNTSILVLVFVVLGGLGSMRGSMAAA 300

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
            +L  + E     + Y                     + L  V+++R
Sbjct: 301 VVLTVLPEALREFSSY---------------RMLAYAVVLIAVMIIR 332


>gi|257454524|ref|ZP_05619782.1| urea ABC transporter, permease protein UrtC [Enhydrobacter
           aerosaccus SK60]
 gi|257448086|gb|EEV23071.1| urea ABC transporter, permease protein UrtC [Enhydrobacter
           aerosaccus SK60]
          Length = 379

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 51/341 (14%), Positives = 103/341 (30%), Gaps = 27/341 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +L V+  L L     A     Y  ++  +I+   M A  L +V G  G+LSL   + +
Sbjct: 21  FAVLMVLPWLHLLPADSALHLSAYWVTLIGKIMCLAMVALALDLVWGYAGILSLGHGLYF 80

Query: 75  AIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           A+G Y+  +                   W  +P     +      M L  L         
Sbjct: 81  ALGGYAMGMYLMRQASGNSLPEFMRFLSWDKMPWFWAGTDNFAWAMILVVLVPALVAFIF 140

Query: 125 ATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                    +     +I    +       +  +  +                 +  +   
Sbjct: 141 GFFAFRSKIKDVYFSIITQAMVFAASLLFFRNETGFGGNNGFTGFKTILGMDIAAPMTRT 200

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            + +    +  L+   + +L           +RD++     L    ++ KLSA+ +S+  
Sbjct: 201 LLCFATAFVLMLAYLGLRYLMHKPYGRVLGAVRDSENRLQYLGYRTLWYKLSAWVLSAII 260

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AGA +      I+P       +I +   V  GG  +L        ++  V       
Sbjct: 261 AGIAGALYVPQVGIINPSEMNPVNSIEMAVWVATGGRGTLIGAILGAGVVNAVKTY---- 316

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                     F  ++      ++     +V L     ++ L
Sbjct: 317 ----------FTVAYPEAWLLILGGLFVVVTLFLPKGIIGL 347


>gi|187921065|ref|YP_001890097.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
 gi|187719503|gb|ACD20726.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
          Length = 316

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 52/314 (16%), Positives = 105/314 (33%), Gaps = 19/314 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           I +  +   +Y + A G ++V G LG+++        +GA   +   +            
Sbjct: 8   IINGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAITVLQDHFPELGHV 67

Query: 94  ----LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
               + + ++A +    G  +   + +       +A LI +     +L     I  G+  
Sbjct: 68  PTLLIALILAAAVCAMVGYTIEKVAYRPLRRAPRLAPLITAIGVSILLQTAAMIIWGRNP 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +     L      +              +  +    +++   F+ A ++L + RT +  A
Sbjct: 128 LAFPQLLPTAPLNLIQASENHP----GAVISLTEIAIVVVAFFVMAGLLLLVHRTKLGRA 183

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R I +N      +     F   + F + SA   +AG   A+        M  F   +  
Sbjct: 184 MRAIAENPNVASLMGVNPGFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKA 242

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ +L        IL  V +L  G        +       +        + L 
Sbjct: 243 FTAAVLGGIGNLGGAMVGGVILGLVEQLGAGYIGTLTGGVFG-----SNYQDVFAFVVLI 297

Query: 330 LVILMRSHSLLRLR 343
            V++ R   LL  R
Sbjct: 298 AVLVFRPSGLLGER 311


>gi|121608339|ref|YP_996146.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121552979|gb|ABM57128.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 339

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 111/334 (33%), Gaps = 26/334 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
              +  ++    +      +   ++ + +LI ++ A  L +  G  G+ +L     +  G
Sbjct: 18  FTAIDAVIAAALVATFFFAELYLALAVSVLIMIILALSLDLAQGYAGIETLGHAAFFGSG 77

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  +         +  + V A  +   G + G+  L+ +G    + TL  + +   + 
Sbjct: 78  AYAAGLYALHISTEPFSGLVVGAAAAAIVGALTGIAVLRTQGLTQIMLTLASATLLLELA 137

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
              K +T G  G+        LG               F I     Y     +  L    
Sbjct: 138 NVAKKVTMGDDGLTGYSIAPLLGR------------FEFDIQGRTAYVYAAVVLMLVYIF 185

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +   + +    + IR+N      L   +    L+ + +S+A  G+AGA  A     + 
Sbjct: 186 AKYFVNSPLGLTAQGIRENPVRMRMLGVRVYARLLAIYTISAAVAGIAGALSAQVNRIVG 245

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            D   F+ +  V+ ++ LGG   L        + + + +    ++               
Sbjct: 246 LDALGFTLSANVLVMLALGGTGRLYGAFIGAVLFMLLSDRAAAVD--------------P 291

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 + + L L +      L+ L     F  R
Sbjct: 292 TNWLAALGVLLILAVRFAPDGLMGLIERFAFKSR 325


>gi|225028597|ref|ZP_03717789.1| hypothetical protein EUBHAL_02876 [Eubacterium hallii DSM 3353]
 gi|224954079|gb|EEG35288.1| hypothetical protein EUBHAL_02876 [Eubacterium hallii DSM 3353]
          Length = 297

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 102/305 (33%), Gaps = 23/305 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      IY + A G ++V G   +L+        IG Y   +L   + L+  + I
Sbjct: 9   SYLINGVSLGSIYAIIALGYTMVYGIAKMLNFAHGDVIMIGCYIVFVLMGSFHLNSTVSI 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + +     G+++   + K       +A LI +      L  +  I  G         +
Sbjct: 69  IAAVIGCTVLGVVIEKIAYKPLRKASPLAVLITAIGVSYFLQNFALILFGADTKSFTSVV 128

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +             +         ++    + A+++++++++    A   + ++
Sbjct: 129 SIPTIKLAG---------GDLTISGVTIATVISCIIIMAALMIFIKKSKSGQAMLAVSED 179

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ S    +AG    ++   +SP        I   +  + G
Sbjct: 180 KDAAQLMGVNVNKTISLTFAIGSGLAAIAGVLLCSAYPTLSPYT-GAMPGIKAFTAAVFG 238

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        +L  +  L         +               ++   L +V+L++ 
Sbjct: 239 GIGSIPGALIGGILLGVIEILGRAYISSQLSDA-------------IVFAVLIIVLLVKP 285

Query: 337 HSLLR 341
             LL 
Sbjct: 286 TGLLG 290


>gi|330963568|gb|EGH63828.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 355

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 68/337 (20%), Positives = 134/337 (39%), Gaps = 16/337 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +      +  F+ +    +  +  ++ I  L+  +   GL+++ G  G LSL      A+
Sbjct: 27  IALWGLLVFAFVGVPLLGNDYWFSAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAV 86

Query: 77  GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GA++   +     G+ + L   +  ++S A  ++ GLPSL+ +G YL ++TL    + + 
Sbjct: 87  GAFAAYNLQLRVPGMPLLLGFALGGLVSAAVALLFGLPSLRIKGFYLLVSTLAAQFVVEW 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L ++   TN  A   +                               Y + L +  L  
Sbjct: 147 VLTRFSWFTNDNASGVITSPPLI-------------IAGVSFSSPQGRYLLTLALVVLLF 193

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254
            +   L R  +   W  +RD   A   +   +  AKL AFA+S  ++G+AG+ +A A   
Sbjct: 194 WLARNLLRGELGRNWMAVRDMDTAAAVIGIRLFKAKLLAFAISGFYLGIAGSLWAFAYLG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            + P  F  + +  ++ I+I+GG+ S+       A ++    L   ++      L+    
Sbjct: 254 TVEPHGFDLNRSFQILFIIIIGGLGSVQGNFFGAAFIVLFPILLGNLSALLPVGLIDSGQ 313

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             N++   L    +   ++     L RL        R
Sbjct: 314 LENIQKM-LFGALIIAFLIKEPEGLARLWQRFRQRAR 349


>gi|298294086|ref|YP_003696025.1| urea ABC transporter permease UrtB [Starkeya novella DSM 506]
 gi|296930597|gb|ADH91406.1| urea ABC transporter, permease protein UrtB [Starkeya novella DSM
           506]
          Length = 535

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 94/307 (30%), Gaps = 17/307 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      I  M A GL+I+ G +G+++L       IGAY   ++          L+  
Sbjct: 244 LYNGLSFASILFMAAIGLAIIFGLMGVINLAQGELIMIGAYVTWLVQQGLRSVAPGLLDW 303

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +++     ++           L     +      ++L  W         + V      
Sbjct: 304 YLILAIPAAFLVTAAIGIALEAAL--LRHLYKRPLMSLLATWAVSLFLVNLVRVIFGTQN 361

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L       +          I+     + +L      A   L +R+T +    R +  N+ 
Sbjct: 362 LQFETPFYVTGGVPVIGDFIFTWNRMFAILFAVVTLALTWLVVRKTPLGLNIRAVTQNRD 421

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        + AF + S   G+AG   +             +  I    +V+LGG+
Sbjct: 422 MAACIGIPTRRVDMMAFGLGSGLAGLAGLALSPIYSV--NPQMGQNFIIDSFMVVVLGGV 479

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +++    A   +  +  L   +                     ++++ +   +  R   
Sbjct: 480 GTIAGTVVAALGIGQINVLIEPLWGAVAAK-------------VIVLLMIIGFLQWRPEG 526

Query: 339 LLRLRTP 345
           L  ++  
Sbjct: 527 LFAVKGR 533


>gi|242239264|ref|YP_002987445.1| inner-membrane translocator [Dickeya dadantii Ech703]
 gi|242131321|gb|ACS85623.1| inner-membrane translocator [Dickeya dadantii Ech703]
          Length = 295

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 60/310 (19%), Positives = 120/310 (38%), Gaps = 19/310 (6%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            +++  +     IY + A  L++  G  GLL+   +    IGAY+  I   ++ L + ++
Sbjct: 2   SEFLLHICCIGGIYAIIALALNLQAGYAGLLNFGHIAFVGIGAYAIGIGS-QFDLPLLVV 60

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           IP   + +    ++M L   +   DY  IATL ++EI +  ++    +T G  GI     
Sbjct: 61  IPAGILCALLVSILMALLGRQLSADYWGIATLALAEIIRIAVMNAGGLTGGAQGIGGLSA 120

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
            +                       +    ++  +  L     + L  +    A R +R+
Sbjct: 121 PWSSDGQATDA--------------LIFAALIFIVLILCTLASVRLADSRFGRALRLMRE 166

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
             +    +   + + K  A   S+    +AG   A     +SPD    SE  ++ S+V++
Sbjct: 167 QPQLAMCMGYALPWLKCRALMCSALMCSLAGMLLAWYTAYVSPDYLLSSETFLIWSMVMI 226

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++  +       + +VE+      +  + L             L  +A+ L +L R
Sbjct: 227 GGLGNIRGVLLG----VALVEVLYNFIPFARDYLQIGSDLTGALRLGLTGLAMLLCLLTR 282

Query: 336 SHSLLRLRTP 345
              LL  +  
Sbjct: 283 PGGLLPEKMR 292


>gi|312863000|ref|ZP_07723239.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Streptococcus vestibularis F0396]
 gi|322517393|ref|ZP_08070267.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           vestibularis ATCC 49124]
 gi|311101495|gb|EFQ59699.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Streptococcus vestibularis F0396]
 gi|322123991|gb|EFX95547.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           vestibularis ATCC 49124]
          Length = 294

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 104/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   IY + A G ++V G + L++      Y +GA+      +   ++ W+ +  
Sbjct: 10  LVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYMMGAFVGYYAINSLKMNFWIALVF 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++    G+++   + +   +   I+ LI +      L        G            
Sbjct: 70  SMIVCAILGVVIEFLAYRPLRNSTRISALITAIGVSFFLEYIMVYFVGADTRS------- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+   +    +        +L+    L  ++ L +++T +  A R +  +  
Sbjct: 123 ----FPQSIKMHTYHLGSISVTNVQLLILVVALVLMVALQLIVKKTKMGKAMRAVSVDSD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S+  G AG       + I P M   +  I      +LGG+
Sbjct: 179 AAELMGINVNNTISFTFALGSSLAGAAGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +  L                   +     ++   L +++L+R   
Sbjct: 238 GIIPGAALGGFVIGILETL-------------STAIGLSSYRDAIVYGVLIVILLLRPAG 284

Query: 339 LLR 341
           +L 
Sbjct: 285 ILG 287


>gi|254295067|ref|YP_003061090.1| urea ABC transporter permease UrtC [Hirschia baltica ATCC 49814]
 gi|254043598|gb|ACT60393.1| urea ABC transporter, permease protein UrtC [Hirschia baltica ATCC
           49814]
          Length = 370

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 57/346 (16%), Positives = 103/346 (29%), Gaps = 28/346 (8%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  ++L   +       Y  ++  + L   + A GL ++ G  G+LSL   + + +G Y
Sbjct: 36  ILPAIILLAAIAPFLLSDYDLNLLGRFLSLSILALGLVLIWGHGGILSLGQGVFFGLGGY 95

Query: 80  SYVILGSR--------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           +  +                +W  I    ++       +           +  A      
Sbjct: 96  AIAMHLKLADLASGELPDFMVWSGIETLPLLWQPFQNPIFTLLAIILVPGIFAALFSWLV 155

Query: 132 IFQNI------LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
             + +      LI           +            + +       P S       +Y+
Sbjct: 156 FNRRVSGTYFALISQALALAFATLLVSRQDWTGGFNGLTNFSTLLGQPLSAASMNYAIYW 215

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
             L +  L    + WL  +      R  RD +     L       K+ AF+V++   GM+
Sbjct: 216 ATLIILCLCFLGLKWLLSSQFGVMLRASRDGENRVRFLGYNPTPIKVVAFSVAAMLAGMS 275

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA F      ISP       +I +I  V LGG  SL      T ++              
Sbjct: 276 GALFTLHAGNISPAAVGVIPSIEMIIWVALGGRFSLIGAIAGTILINV------------ 323

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             S  +   +F       +     L +      L  L       ER
Sbjct: 324 --SRDRISSAFPELWLYFIGALFVLSVTFLPKGLAGLYEKLTTKER 367


>gi|226193808|ref|ZP_03789410.1| urea ABC transporter, permease protein UrtB [Burkholderia
           pseudomallei Pakistan 9]
 gi|225934113|gb|EEH30098.1| urea ABC transporter, permease protein UrtB [Burkholderia
           pseudomallei Pakistan 9]
          Length = 456

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 79/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +              
Sbjct: 182 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 241

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         + +      +     S +         +
Sbjct: 242 LER--TVLRHLYGRPLETLLATFGVSLILIQAMRMIFGAQNVQVVNPSWMSGGVTVMQNL 299

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 300 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 359

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  +     V+LGG+  ++        L  V + 
Sbjct: 360 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 417

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 418 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 455


>gi|194337049|ref|YP_002018843.1| inner-membrane translocator [Pelodictyon phaeoclathratiforme BU-1]
 gi|194309526|gb|ACF44226.1| inner-membrane translocator [Pelodictyon phaeoclathratiforme BU-1]
          Length = 287

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 69/296 (23%), Positives = 122/296 (41%), Gaps = 22/296 (7%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           YI  + I + IYVM +  LS+  G  G++SL     Y IGAY+  +L   Y +     + 
Sbjct: 3   YILHLLIIVSIYVMLSQSLSLTAGFAGMISLAHAGFYGIGAYTTALLSINYQMPFIYTLF 62

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
              +I G   M++ + +L+   DY  I TL +  +   IL  W  +TNG  GI     + 
Sbjct: 63  FGILICGIIAMLVSIIALRTIDDYFIICTLGIQIVIFTILNNWMSLTNGPMGIMGIPSIS 122

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                  +               +    + +    +    I  + +++     + + +++
Sbjct: 123 VFQIDFSNK--------------LSFLILSIIFSVVIFIFIKLIVKSSFGRVLKALSEDE 168

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               S+   +  +K+ AF +SS    + GA +A     + P  F  +E+I ++SIVI+GG
Sbjct: 169 IYTQSVGKNVYLSKVIAFTISSMIAAIPGALYAHYTSFVDPSSFTVNESIFILSIVIIGG 228

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           M +L  I  A A L+ + E    +           +         +  I L LVI 
Sbjct: 229 MRNLWGIIFAAAFLVLLPEALRFVGLP--------NNIAANLRQIIYGIILILVIF 276


>gi|189349621|ref|YP_001945249.1| branched-chain amino acid transporter permease [Burkholderia
           multivorans ATCC 17616]
 gi|189333643|dbj|BAG42713.1| branched-chain amino acid transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 395

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 45/350 (12%), Positives = 99/350 (28%), Gaps = 32/350 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 52  LAVGIGVPLAALVAPESSAFHLSAYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 111

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                          +++ +   
Sbjct: 112 FALGGYAIGMYLMREIGRDGQYGSDLPDFMVFLDWHQLPWYWAGTQHLAWALLLVVIVPA 171

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +   A     +     +I            Y  +  +          R   FP +
Sbjct: 172 VLAWVFGFFAFRSRVKGVYLSIITQALTFAAMLLFYRNETGFGGNNGFTDFKRIAGFPIT 231

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +  +      L+      +  + +      +RD +     L  + +  KL  +
Sbjct: 232 SPGTRTVLLLLTFATLVLAFVAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 291

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+   G+AGA +      ++P       +I +   V +GG  +L         + G  
Sbjct: 292 TVSAVLCGIAGALYVPQVGIVNPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 351

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
            +                  F       + +   LV L+    ++ +   
Sbjct: 352 SVFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGVVER 387


>gi|221070045|ref|ZP_03546150.1| urea ABC transporter, permease protein UrtB [Comamonas testosteroni
           KF-1]
 gi|220715068|gb|EED70436.1| urea ABC transporter, permease protein UrtB [Comamonas testosteroni
           KF-1]
          Length = 537

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 90/291 (30%), Gaps = 16/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++   +   +   +    ++       +    +  
Sbjct: 262 ITYGLMGVINMAHGELIMIGAYATYLVQVAFQRWLPESLFGWYLVVAVPVAFLASALVGA 321

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
             +   I  L      + +L  +      +  +        +G      +         +
Sbjct: 322 VLERGVIRFL-YGRPLETLLATFGISLVLQQTVRSLFGAQNVGVENPVWMSGGIALLPNL 380

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                   +++    + A +   + RT +    R +  N+     +          AFA+
Sbjct: 381 TLPWNRIAIIVFAFAVLAGVAFMIARTRLGLFVRGVTQNRAMASCVGVNTARTDTYAFAL 440

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG   A S+          +  +    +V+LGG+  L+    A   L  + +L
Sbjct: 441 GSGIAGLAGC--ALSQIGNVGPDLGQNYIVDSFLVVVLGGVGQLAGTVYAALGLGVLSKL 498

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             G                       +++ + + I  R   +  L+  S  
Sbjct: 499 LEGWTGAVLAK-------------IAVLLFIVVFIQKRPQGIFALKGRSAE 536


>gi|289177904|gb|ADC85150.1| LivH [Bifidobacterium animalis subsp. lactis BB-12]
          Length = 488

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 80/302 (26%), Gaps = 24/302 (7%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           I  L+  + A G+++V G+ GL S +      +G     +      + + L    +  I 
Sbjct: 209 IFGLMLGLMAVGMNLVYGTTGLSSFSHGEQVTLGGLMAYVGTQMLHMPVVLSAIFAVAIG 268

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
              G +                   M             I    A  Y+    +      
Sbjct: 269 ALAGWVQNQLVWAPLRHKRVGVMQQM----------IVTIGLSMALQYIYQFFFGGDIKG 318

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                        ++                 S+ ++L  T +  A R + DN     + 
Sbjct: 319 IVKSVPEGIQLGPIVTNAPTLIAAAIALVTIVSVTVFLYCTRLGRATRAVSDNAALAAAS 378

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              +       + +S     ++G       + I+ +    +  +++ + V LGG+ + + 
Sbjct: 379 GINVDSVVRIVWILSCGLAALSGVLIGIHLNGIAWNT-GVTLLMLMFAAVTLGGLGTANG 437

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                 I+  V ++   +                +                R   +   +
Sbjct: 438 ALVGALIVGIVADMSTLVIPSDMRYASALAILILVLLI-------------RPQGIFGKQ 484

Query: 344 TP 345
             
Sbjct: 485 KR 486


>gi|318040811|ref|ZP_07972767.1| putative membrane protein of urea ABC transport system
           [Synechococcus sp. CB0101]
          Length = 384

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 45/335 (13%), Positives = 98/335 (29%), Gaps = 29/335 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             +++   +       +  ++  + L   + A G+ ++ G  G+LSL   I +A+G Y+ 
Sbjct: 17  VLIVVGALVLPVVLPPFRLNLLGRFLSLGIVALGVDLIWGYTGMLSLGQGIFFALGGYAL 76

Query: 82  VILGSRYGLSI-----WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN- 135
            +      L       +  +     +                   +      +       
Sbjct: 77  AMYLQLNELKPGELPEFFSLYGVKSLPAFWQPFNSPLFTLVAIWVIPAVVAGLVGYLVFR 136

Query: 136 ---------ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
                    IL +   +            +        S  R F         +  ++++
Sbjct: 137 NRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTSTARVFGELIGSDGMQRNLFWL 196

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            + +  L+  +  WL      +A   IRD++             K   FAV+ A  G++G
Sbjct: 197 TVVITVLAFLLCRWLTHGRFGDALIAIRDDEPRLRFTGYNPTAYKTVVFAVAGALAGISG 256

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A +      +SP       +I ++  V +GG  +L        ++     L         
Sbjct: 257 ALYTVQSGIVSPQYMAVPFSIEMVIWVAVGGRGTLIGAVLGAVLINYAKSLVSE------ 310

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +       +      LV+L     L+ 
Sbjct: 311 --------ALPETWLFIQGGLFLLVVLALPDGLVG 337


>gi|295701317|ref|YP_003610318.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295441640|gb|ADG20807.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 316

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 101/310 (32%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           I +  I   +Y + A G ++V G LG+++        +GA   +                
Sbjct: 8   IMNGLILGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAIGVLQNHFPGLGNV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L + V+ +I+ A   ++G    +     L  A  +        +                
Sbjct: 68  LTLVVALVIAAAVCAVVGYTIERVAYRPLRRAPRLAPLTTAIGVSILLQTLAMMIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    +++    +   ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISMTEIVIIVVAFVVMGGLLLLVHKTRLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      +  +  F   + F + SA   +AG   A+        M  F   +   +  
Sbjct: 188 AENPNVASLMGVSPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIVVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|126734799|ref|ZP_01750545.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter sp. CCS2]
 gi|126715354|gb|EBA12219.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter sp. CCS2]
          Length = 327

 Score = 89.5 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 49/287 (17%), Positives = 107/287 (37%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+  L+         ++ +  ++  + +I+ + A GL+I +G  G++SL   + + IG 
Sbjct: 10  FVLALLIAVPAWAVVANEPFTITLATRAVIFALAATGLNIALGLGGMVSLGHAVFFGIGG 69

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL         L+  +  +       ++ L ++   G    +  L+         I
Sbjct: 70  YAMGILAHHAQTYTPLMDGLFLIEGTKSMPVIWLVAMVTSGIAALLIGLVSLRTGGVYFI 129

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                       +      + G    S+     FP    +  I  + +   +  +   + 
Sbjct: 130 MITLAFGQMFYYFSISWATYGGEDGLSIYLRNDFPGLNTLVPINFFAICFTILLIVLLLN 189

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + ++    A    R   +   ++       KL AF +S    G+AGA FA     +SP
Sbjct: 190 ALIAKSPFGLALNAARQVPQRAEAVGLNPQRLKLVAFVISGVITGLAGALFADLNRFVSP 249

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
            MF +  +  ++  +ILGG+  L        + + +  +   ++ Y+
Sbjct: 250 TMFSWQTSGEIMIFIILGGVARLCGPVVGAVVFVMLEHVLGDLSDYW 296


>gi|194289187|ref|YP_002005094.1| branched-chain amino acid ABC transporter [Cupriavidus taiwanensis
           LMG 19424]
 gi|193223022|emb|CAQ69027.1| putative Branched-chain amino acid ABC TRANSPORTER, membrane
           component [Cupriavidus taiwanensis LMG 19424]
          Length = 402

 Score = 89.5 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 51/354 (14%), Positives = 100/354 (28%), Gaps = 32/354 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + V    LL           Y  ++  +I+ + + A  L +V G  G+LSL   + +
Sbjct: 38  IVGIGVPVCALLVPEGHPLHLSAYALTLVGKIMCFALAAIALDLVWGYCGILSLGHGLFF 97

Query: 75  AIGAYSYVILGSRYG----------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           A+G Y+  +   R                + +    +     G      +L        +
Sbjct: 98  ALGGYAMGMYLMRSIGREGVYKSDLPDFMVFLDWKELPWFWHGTDHLGYALLLVVLVPGV 157

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT--------VRSLIRFFRFPSSF 176
              +         IK   ++     +  A  L F                 R   F  + 
Sbjct: 158 LAWLFGFFAFRSRIKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRIAGFAIAA 217

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
                 ++ +             ++  + +      +RD +        + +  KL  + 
Sbjct: 218 PQTRAALFVLTFLALLGGFVACRYIVTSKLGRVVTAVRDAEMRVMFSGYSPLGYKLFVWT 277

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
            S+   G+AGA +      I+P       +I +   V +GG  +L        ++ G   
Sbjct: 278 FSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAVWVAVGGRGTLIGPVIGAFLVNGAKT 337

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           L              F   F      L+     LV L     +  L        
Sbjct: 338 L--------------FTAHFAEYWLFLLGAMFVLVTLYLPDGVTGLWQRWRERR 377


>gi|188532832|ref|YP_001906629.1| Putative branched-chain amino acid transport system, permease
           component [Erwinia tasmaniensis Et1/99]
 gi|188027874|emb|CAO95731.1| Putative branched-chain amino acid transport system, permease
           component [Erwinia tasmaniensis Et1/99]
          Length = 519

 Score = 89.5 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 85/290 (29%), Gaps = 17/290 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       IGAY+  ++   +       +    +++      +       
Sbjct: 246 ITYGLLGVINMAHGEMLMIGAYATWMVQHLFQRYAPEWLTFYPLLALPAAFFLTAAIGMM 305

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 I   +     + +L  W         + +      L     + +         +
Sbjct: 306 LER--TIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNLEVANPAWLSGGWQVLPNL 363

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+L +  +     L L +T +    R +  N+              + AF +
Sbjct: 364 MLPYNRLAVMLFVVGVLVLTWLLLNKTRLGLNVRAVTQNRAMADCCGVATGRVDMLAFGL 423

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+             I    +V+ GG+  L+    A   L  + ++
Sbjct: 424 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVTGGVGQLAGTVCAALGLGILNKV 481

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                                    L+++ + L I  R   L  L+  + 
Sbjct: 482 LEPQIGAVLGK-------------ILILVLIVLFIQKRPQGLFALKGRAI 518


>gi|218780757|ref|YP_002432075.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218762141|gb|ACL04607.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 325

 Score = 89.5 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 55/324 (16%), Positives = 118/324 (36%), Gaps = 30/324 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V+ +LL L             +  +ILIY +FA G ++ +G  G+LS      + +G Y
Sbjct: 13  IVWAILLVLAPMPLVLS---TPLATEILIYAIFAMGFNLALGHTGILSFGHAAYFGLGCY 69

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +      L ++  + +  + +G   + +   ++K +G Y A+ +L  S++   + + 
Sbjct: 70  ITGMALRYLELGVFPALLLGTVAAGLAALALAALAVKRQGVYFAMISLAFSQMLYFLALS 129

Query: 140 -WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
             K +T G+ G+    +L         L R +             Y+  L    L+   +
Sbjct: 130 PLKGLTGGEDGLKFIPKLAIEFPVTLDLSRPWS-----------AYWFTLLFFALALFAM 178

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +  + +      +R+N+    SL       K+ + A+S  F G+AG         +  
Sbjct: 179 RQVLNSPMGRLLPAVRENEARVKSLGFPSHALKIMSMAISGLFCGLAGGLLTVYLGYVPL 238

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
               +  +  ++ + ILGGM S S       + + + ++       +             
Sbjct: 239 STLHWFTSGSIMMMTILGGMQSFSGPIVGVLVFLCLQDVTGNFTERWE------------ 286

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                       +IL+    +   
Sbjct: 287 ---LFSGTLFMALILLFPQGVAGT 307


>gi|291460305|ref|ZP_06599695.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291417060|gb|EFE90779.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 294

 Score = 89.5 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 105/307 (34%), Gaps = 23/307 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      +Y + A G ++V G   +L+        +GAY+  I  +  GL I    
Sbjct: 6   SYLLNGISLGAVYAIIALGYTMVYGIAKMLNFAHGDILMLGAYTAFIAFNSLGLPIPASA 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ ++    G++    + K      ++A LI +     +L     +  G         +
Sbjct: 66  LLAVIVCTLTGILTERIAYKPLRGANSLAVLITAIGVSYLLQNLALLIFGANPKSFQSFI 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +             +         +L    ++A ++L++ RT    A   + ++
Sbjct: 126 PIKPLHLAG---------GALTIPGETIATILTGLIVAAGLLLFVHRTKAGQAMLAVSED 176

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ SA   +AG    ++   ++P        I      +LG
Sbjct: 177 KGAATLMGVNVNATIAMTFAIGSALAAVAGILLCSAYPSLTPTT-GAMPGIKAFVAAVLG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        IL  +  L         +  + F               L LV+L++ 
Sbjct: 236 GIGSIPGAFLGGVILGILENLSKAYISSKLSDAIVFS-------------VLILVLLVKP 282

Query: 337 HSLLRLR 343
             +L  +
Sbjct: 283 SGILGKK 289


>gi|90425184|ref|YP_533554.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90107198|gb|ABD89235.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 389

 Score = 89.5 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 51/360 (14%), Positives = 106/360 (29%), Gaps = 38/360 (10%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGAT------KSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           L++   I  ++     +LL L               Y+ ++  + + Y + A  + ++ G
Sbjct: 10  LDRSATIFLVIVAAVGILLPLANLLFPEGSALHVPTYLMALFGKYVCYALLALSIDLIWG 69

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G+LSL     +A+G Y+  +   R   S  +                 LP   +  D 
Sbjct: 70  YCGILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGNPVLPDFMVFLNYNELPWYWYGFDM 129

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162
              A L++  +   +   +  +                          +  D  +     
Sbjct: 130 FWFAALMVLVVPGLLAFGFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRNDFGFGGNNG 189

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +        F          ++ +      L   I   +  + +      IRD +     
Sbjct: 190 LTDFKDILGFNVQADGTRAALFALSCLALALGFLICRAVVTSKLGKVLIAIRDAESRTRF 249

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   +   KL  F +S+   G+AGA +      I+P  F    +I  +  V +GG  +L 
Sbjct: 250 LGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPGEFAPGNSIEAVIWVAVGGRGTLI 309

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             A    ++     +                         ++     LV L+    ++  
Sbjct: 310 GAALGAVVVNYAKTVFTS-------------GPLAPYWLFMLGALFILVTLLLPKGIIGT 356


>gi|307298926|ref|ZP_07578728.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915351|gb|EFN45736.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 320

 Score = 89.5 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 69/318 (21%), Positives = 132/318 (41%), Gaps = 15/318 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +LL +         Y   +  + LI+ + A GL  + G  G +SL     YAIG
Sbjct: 5   IFVIGAILLIILFPLFVKNSYHLYLMNRALIHAILATGLVFLTGFAGQISLGQAGFYAIG 64

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYS      + G+ I + I    +IS   G ++ +PS K +  +L++ T+   +I   ++
Sbjct: 65  AYSSAYFTVKLGMPIVVGIIAGIVISVIAGFLLSIPSFKLKAFFLSLVTIAFGQIVWMLV 124

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I   PIT G  G +      F                  ++    ++++  G+  LS  I
Sbjct: 125 INLTPITGGPYGFFGIPFYSF---------------GGVMLSFGQVFWLFGGLLLLSVFI 169

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  ++ +    A   + D+  A  +   +    K++AF  S+   G+AGA +A     +S
Sbjct: 170 MFRIKHSHFGRAMLAMNDDDVATETCGISTKKLKIAAFGFSAGLAGLAGALYAHLAGFLS 229

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F F E+   +++ ++GG+  +S        L  + E      +  +  ++       
Sbjct: 230 PEPFTFFESSNFVAMAVVGGLRHMSGGVVGGIGLTLLPEFLRFGGWENYYLMVTSLIVIV 289

Query: 318 MRHTTLMVIALFLVILMR 335
           +     M +   L  L R
Sbjct: 290 IVIFMPMGLGPILESLFR 307


>gi|317404504|gb|EFV84913.1| inner-membrane translocator [Achromobacter xylosoxidans C54]
          Length = 328

 Score = 89.5 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 117/306 (38%), Gaps = 19/306 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            ++  +  + LIY + A  L +V+G   ++S    + + +G Y+  I+      +  L  
Sbjct: 34  PFLIGVVTRFLIYGLAAVSLDLVIGYGAMVSFGHAMFFGLGGYAVGIIAFHTTEAGPLFG 93

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              +  +     I           +  +A       F  I + +  +        +    
Sbjct: 94  WAGSNAALVVWPIALAVCALAGWLFGYLALRTRGVQFIMITLAFGQMVY----FILVSLQ 149

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           ++ G     + +    P   +   +  YYV L +  +   + + +  +      + +R +
Sbjct: 150 FYGGDDGLMISQRNVLPGLNLENPLTFYYVCLALLTVWTLLCIRVTNSRFGMVLQALRQS 209

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +L       +LSAF +S+   G+AG  +A     ++PDM  ++++  +++IVILG
Sbjct: 210 ERRAINLGVAPTPYRLSAFVLSAVGTGLAGVLWANYAGLVTPDMAAWTKSGELMAIVILG 269

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +L       A+ +G+ ++   +  ++                  M   L LV+L   
Sbjct: 270 GVGTLLGPIAGAAVFLGLEQMLSSLTEHW---------------LLYMGPVLVLVVLWGQ 314

Query: 337 HSLLRL 342
             L   
Sbjct: 315 KGLFGR 320


>gi|227115092|ref|ZP_03828748.1| putative branched-chain amino acid transport system, permease
           component [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 529

 Score = 89.5 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 84/288 (29%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY+  ++ S         +    +++      +       
Sbjct: 256 ITYGLLGVINMAHGEMLMLGAYATWLVQSLCQQFAPSWLAYYPLLALPVAFFITAGIGMV 315

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      L     + +         +
Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRMLFGTQNLEVANPAWLSGGLRVLPNL 373

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V++ +  +     L L +T +    R +  N+              + AF +
Sbjct: 374 VLPYNRIAVIVFVLGVLLLTWLILNKTRLGMNVRAVTQNRAMADCCGVPTGRVDMLAFGL 433

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+             I    +V+LGG+  L+    A   L  + ++
Sbjct: 434 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFSLGILNKV 491

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                    +++I + L I  R   L   +  
Sbjct: 492 LEPQMGAVLGK-------------IVILILIVLFIQKRPQGLFAFKGR 526


>gi|331015520|gb|EGH95576.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 355

 Score = 89.5 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 73/352 (20%), Positives = 143/352 (40%), Gaps = 22/352 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF LR ++      +      +  F+ +    +  +  ++ I  L+  +   GL+++ G
Sbjct: 18  RIFRLRQDR------VALWGLLVFAFVGVPLLGNDYWFSAILIPFLVLSLAGLGLNLLTG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
             G LSL      A+GA++   +     G+ + L   +  ++S A  ++ GLPSL+ +G 
Sbjct: 72  YAGQLSLGSAAFMAVGAFAAYNLQLRVPGMPLLLGFALGGLVSAAVALLFGLPSLRIKGF 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YL ++TL    + + +L ++   TN  A   +      +     S  +            
Sbjct: 132 YLLVSTLAAQFVVEWVLTRFSWFTNDNASGVITSPPLIIAGMNFSSPQG----------- 180

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
              Y + L +  L   +   L R  +   W  +RD   A   +   +  AKL AFA+S  
Sbjct: 181 --RYLLTLALVVLLFWLARNLLRGELGRNWMAVRDMDTAAAVIGIRLFKAKLLAFAISGF 238

Query: 241 FIGMAGAFFA-ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           ++G+AG+ +A A    + P  F  + +  ++ I+I+GG+ S+       A ++    L  
Sbjct: 239 YLGIAGSLWAFAYLGTVEPHGFDLNRSFQILFIIIIGGLGSVQGNFFGAAFIVLFPILLG 298

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            ++      L+      N++   L    +   ++     L RL        R
Sbjct: 299 NLSALLPVGLIDSGQLENIQKM-LFGALIIAFLIKEPEGLARLWQRFRQRAR 349


>gi|209517438|ref|ZP_03266279.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209502092|gb|EEA02107.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 316

 Score = 89.5 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 102/310 (32%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           I +  +   +Y + A G ++V G LG+++        +GA   +                
Sbjct: 8   ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAIGVLQNHFPGLGSV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L + ++ +I+ A   ++G    +     L  A  +   I    +                
Sbjct: 68  LTLVIALIIAAAVCSVVGYTIERVAYRPLRRAPRLAPLITAIGVSILLQTLAMMIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    +++    +   ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIASGPNNPGAVISMTEIVIIVVAFIVMGGLLLLVHKTRLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      +  +  F   + F + SA   +AG   A+        M  F   +   +  
Sbjct: 188 AENPNVASLMGVSPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIVVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|116617600|ref|YP_817971.1| ABC transporter permease [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096447|gb|ABJ61598.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 324

 Score = 89.5 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 78/340 (22%), Positives = 138/340 (40%), Gaps = 43/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           KY      LA +  +L+F+         Y  +  + I I ++ A GL++VVG  G  SL 
Sbjct: 7   KYTLSWASLAAMGFILIFVAQMLGLIGHYGITTIVLIGINIIAALGLNLVVGISGQFSLG 66

Query: 70  CVIAYAIGAYSYV--ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+    +      +   L +    ++SG   +I+G+P+L+ RGDYLAIATL
Sbjct: 67  HAGFMAIGAYATALVMEVVPGIIGFILGMAAGIVVSGVIALIVGIPTLRLRGDYLAIATL 126

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +EI + +++  K                                  F I     + ++
Sbjct: 127 GFAEIIRIVIMNLKITNG--------------------------PAGIFGIAPFVSWQLV 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  ++  I++   R+    A   +RDN+ A  SL       K+ AF   + F  MAG+
Sbjct: 161 YILAVITLIIVVNFVRSMPGRAIIAVRDNEIAAESLGINTTKYKVIAFVTGALFAAMAGS 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A+    I+P  + F ++I+++ I+++GG+ S+S        L  +  +          
Sbjct: 221 LRASFIQSIAPKDYAFMQSIMILIIIVIGGIGSMSGTVVTAIALGVLDTMLQNF------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  + L  V+L+R   +   R  S 
Sbjct: 275 ---------GSLRMVIYAVILIAVMLVRPQGIFGSRELSL 305


>gi|89897771|ref|YP_521258.1| hypothetical protein DSY5025 [Desulfitobacterium hafniense Y51]
 gi|219670920|ref|YP_002461355.1| inner-membrane translocator [Desulfitobacterium hafniense DCB-2]
 gi|89337219|dbj|BAE86814.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219541180|gb|ACL22919.1| inner-membrane translocator [Desulfitobacterium hafniense DCB-2]
          Length = 293

 Score = 89.5 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 99/307 (32%), Gaps = 23/307 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            ++ S      +Y + A G ++V G   +L+        +GAY      +R  L     +
Sbjct: 5   SFLISGLSLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMVGAYVCFFATTRGNLHPVFGV 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ ++    G+++   + K      ++A LI +      L     +            +
Sbjct: 65  LLAMVVCTILGVVIERLAYKPLRAATSLAVLITAIGVSYFLQNAALLLWSSNPKVFTSVV 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +             +   +     ++    + A +  +  +T +  A R   ++
Sbjct: 125 GNGSLKLFD---------GQLTISVIAIVTIVACLIIMAVLTWFTGKTKMGKAMRACSED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   + F     FA+ SA   +AG    ++   +          I   +  +LG
Sbjct: 176 KGAAQLMGINVNFTISVTFAIGSALAAIAGVLLCSAYPTL-MPTTGSMPGIKAFTAAVLG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        +L  +     G      +  + F               L L +L++ 
Sbjct: 235 GIGSIPGAMIGGILLGVIEIFGKGYISTQLSDAIVFS-------------VLILTLLVKP 281

Query: 337 HSLLRLR 343
             LL  +
Sbjct: 282 TGLLGKK 288


>gi|227821175|ref|YP_002825145.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
 gi|227340174|gb|ACP24392.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 325

 Score = 89.5 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 63/310 (20%), Positives = 113/310 (36%), Gaps = 29/310 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             I+IL + +FA   ++V+G  GLLS      +   AY        + L   L +     
Sbjct: 44  FLIKILCFALFAAAFNLVLGYAGLLSFGHAAFFGGAAYITAHAAKVWQLPFELAVLAGTA 103

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+  G  +++  G Y A+ TL ++++   + ++    T G+ GI    R      
Sbjct: 104 FAALLGLAFGTLAIRRHGIYFAMITLALAQMIYFMAVQMP-FTGGEDGIQAVPR------ 156

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                   +      +     MYY +LG   L   II     +   +    IR+N+    
Sbjct: 157 -------GYLLGIIDLRDITAMYYTVLGGTILGLVIIWRTVNSPFGHILSAIRENETRVT 209

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+A  G AGA  A +    S     +  +  VI + +LGGM +L
Sbjct: 210 SLGLKPERYKLIAFTLSAALSGFAGALKAIAFQLASLVDVTWHMSGEVILMTLLGGMGTL 269

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  +I++G+                          T ++ +   + ++M    +  
Sbjct: 270 IGPIVGASIVVGLEHFLSTSGLPI---------------TFIIGLFFVVCVMMFRRGVFG 314

Query: 342 LRTPSNFLER 351
                    +
Sbjct: 315 ELKALLERSK 324


>gi|88855851|ref|ZP_01130514.1| branched-chain amino acid transport system permease protein [marine
           actinobacterium PHSC20C1]
 gi|88815175|gb|EAR25034.1| branched-chain amino acid transport system permease protein [marine
           actinobacterium PHSC20C1]
          Length = 326

 Score = 89.5 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 68/306 (22%), Positives = 127/306 (41%), Gaps = 5/306 (1%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           Y + A GL++  G  GLL++      AIGAY Y I    +G   W  + V    S    +
Sbjct: 22  YALAALGLAMHFGFTGLLNMGMAAFMAIGAYGYAISILTFGFPWWGGMLVGVGGSLIFAL 81

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILI-KWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           I+G+P+L+ RGDYLAI T+  +E+ + + +        G A         F         
Sbjct: 82  ILGIPTLRLRGDYLAIVTIAAAEVVRLLFLTTTFDKYTGSADGLSGYHASFRAFNPIPDG 141

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
            +   P  +     ++    + +  L+A I+  + R+      + IR+++ A  +L   +
Sbjct: 142 TYGFGPWVYNANGWWVRIFGIVILALAALILWTVMRSPWGRVIKGIREDEDAVRALGKNV 201

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
              KL +  +   F  M G  +A     ++P ++  S    V + ++LGG  ++      
Sbjct: 202 FSYKLQSLMLGGVFGAMGGIIYALPA-SVNPGVYVTSLTFFVYTALLLGGAATIFGPIIG 260

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMR---HTTLMVIALFLVILMRSHSLLRLRT 344
           + I  GV  L   +     N  +    +          L+ +AL L+++ R   +L  + 
Sbjct: 261 SVIFWGVQTLLSNLLPALVNIGVLPFMTTTQSQTVRFILVGVALMLLVIYRPQGILGNKK 320

Query: 345 PSNFLE 350
              F++
Sbjct: 321 ELTFVK 326


>gi|296331301|ref|ZP_06873773.1| urea ABC transporter, permease protein UrtC [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305676287|ref|YP_003867959.1| urea ABC transporter permease protein UrtC [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296151416|gb|EFG92293.1| urea ABC transporter, permease protein UrtC [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305414531|gb|ADM39650.1| urea ABC transporter, permease protein UrtC [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 356

 Score = 89.5 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 45/336 (13%), Positives = 99/336 (29%), Gaps = 27/336 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             +           Q++   +  + L + + A G+ ++ G  G+LSL   + + +GAY  
Sbjct: 11  LVMFALFIAAPIFLQEFRLGLLAKFLCFAIVAVGICLIWGYTGILSLGHGVFFGLGAYCM 70

Query: 82  VIL-------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI-- 132
            +                W  +     I           +            L       
Sbjct: 71  AMYLKIEASPSGIPDFMEWTGVSELPWIWAMFRYPFSAIAAAVIVPVFLALLLGYFTFRN 130

Query: 133 ----FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                   LI    +         +  +      + +    F++  +    +  +Y+  +
Sbjct: 131 NIKGVYFSLISQAVVVVVVTLFIGSQDITGGTNGLTNFYTIFQYALADPAIKQILYFTTV 190

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
               +S    L+L R+      + +RD +             K+  + VS+A  G+AG  
Sbjct: 191 FFLGVSVVFALFLTRSRFGRLLQAVRDGESRVRFFGYHSTVFKVFIYCVSAAMAGIAGML 250

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           F      ISP+M     ++ ++  V +GG  S+        +  G+              
Sbjct: 251 FVLQDGMISPEMMGIIPSVEMVLWVAIGGRHSIFGAVLGALLTNGMKSYLSEY------- 303

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                  +       +     +V+L     ++ L  
Sbjct: 304 -------YPDIWLYFLGALFIIVVLYMPKGIVGLFE 332


>gi|255659026|ref|ZP_05404435.1| amino acid ABC transporter, permease protein [Mitsuokella multacida
           DSM 20544]
 gi|260848811|gb|EEX68818.1| amino acid ABC transporter, permease protein [Mitsuokella multacida
           DSM 20544]
          Length = 318

 Score = 89.5 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 73/340 (21%), Positives = 134/340 (39%), Gaps = 41/340 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L K D I+ + +VV   +L L +       +     + I I ++ A  L+++ G  G  S
Sbjct: 4   LRKNDCIMLVFSVVLFAVLQLLITERILSSFWQLNLLIIGINIILAASLNLINGYTGQFS 63

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      A+GAY  V+L + + L   + +    + +G  G ++G+P+L+ RGDYLAIATL
Sbjct: 64  LGHAGFMAVGAYVGVVLTTNFHLPFAVALIAGGIAAGFLGFLVGIPTLRLRGDYLAIATL 123

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            + EI + +++  + +        +                               +  +
Sbjct: 124 GLGEIIRIVIMNIQYVGGAAGFKGIPHHTT--------------------------FAWV 157

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +   +   I     +    A   IR+N+ A  S+       K+ AF + +AF G+AG 
Sbjct: 158 FFIMLFTLFFIKNFVNSNHGRACLAIRENEIAAESMGVNTTKYKVMAFTIGAAFAGVAGG 217

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            FA     ISP  F F +    + +V++GG+ S++       ++  +             
Sbjct: 218 LFAHCFYLISPASFTFMQTFNYLIMVVMGGLGSITGSIAGAFVVTFISAALAS------- 270

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                   +      +  IAL L++  R   L      +N
Sbjct: 271 --------WPEFRMIIYAIALILLMFYRPQGLFGYMEITN 302


>gi|171057480|ref|YP_001789829.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
 gi|170774925|gb|ACB33064.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
          Length = 335

 Score = 89.5 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 54/308 (17%), Positives = 115/308 (37%), Gaps = 15/308 (4%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
                  L +   L    F+ +   Q +  S   +I+IY + A  L++ +G  GL+S   
Sbjct: 7   RPATAIPLLLFIGLATVPFIASALEQPFWTSFFARIVIYAIAATALNLALGYGGLVSFGH 66

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
            +   +G+Y+  +       S W+ + +  ++     +++G  SL+  G    + TL  +
Sbjct: 67  ALFLGLGSYAVALPAFHGIESGWVHLALCLVVCSVGALVIGAISLRTSGMAFIMITLAFA 126

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           ++   +L+  K                       ++     F S  +     +Y     +
Sbjct: 127 QMGYFLLVSLKQYGG---------------DDGLAVSTTSAFGSVNLGSSHVLYAAAWAV 171

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +    +  LR      A R  R N +   ++       +L AF +S A  G+AG   A
Sbjct: 172 LAMVTWWMARLRSAPFGMALRGARQNARRINAIGLQAQKLQLVAFIISGAISGVAGLLLA 231

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                 SP    ++ +  +I +V+LGG+ ++        + +G+ E+  G+  ++     
Sbjct: 232 NLNAYASPSSMAWTVSGELIVMVVLGGIGTVFGPLVGALLFLGLEEVLKGLTEHWMAIFG 291

Query: 311 KFDCSFNM 318
                  +
Sbjct: 292 PLIVLMAL 299


>gi|158334048|ref|YP_001515220.1| urea/ branched-chain amino acid ABC transporter permease
           [Acaryochloris marina MBIC11017]
 gi|158304289|gb|ABW25906.1| urea/ branched-chain amino acid ABC transporter, permease protein,
           putative [Acaryochloris marina MBIC11017]
          Length = 392

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 48/343 (13%), Positives = 95/343 (27%), Gaps = 28/343 (8%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            ++ +   ++       L     Q++  +M  + +   + A G+ ++ G  G+LSL   I
Sbjct: 23  GVIVVAIALFIQFGAPLLLTAIGQEFRINMLGRFMSLAIVALGIDLIWGYTGMLSLGHGI 82

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            +++G Y+  +          L    +                        +        
Sbjct: 83  FFSLGGYALGMFLQLQLPEGQLPEFFTLFGVDKLPGFWQPFHSLPFTLAAIVLIPASIAA 142

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF--------------FRFPSSFVI 178
               L+    I      I     L        S  +               F   +    
Sbjct: 143 LLGYLVFRNRIRGVYFSILTQASLIVFFNFFNSQQKLINGTNGLKTDTTKIFGVYAGSDQ 202

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
            +   Y + +    L+  +  WL    +      IRD++             K+  FAVS
Sbjct: 203 AQSVFYTLTVIFLVLAYLLCRWLTSGRLGRLLIAIRDDESRVRFSGYDPTGFKVLVFAVS 262

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           +   G+AGA +      ISP     + +I ++  V +GG  SL         +     L 
Sbjct: 263 AGLAGIAGALYTVQSGIISPKTMDIAFSIEMVIWVAVGGRASLVGAIFGALAVNFAKSLL 322

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                            F             +V+ +     + 
Sbjct: 323 SE--------------QFPEIWLFFQGALFLVVVTVLPGGFVG 351


>gi|149201136|ref|ZP_01878111.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. TM1035]
 gi|149145469|gb|EDM33495.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. TM1035]
          Length = 657

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 101/322 (31%), Gaps = 26/322 (8%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
            LG  ++   +        I+ + A GL+I  G +G++++       +GAY+  +    +
Sbjct: 357 ALGLFQTFDLVLDGLSLASIFFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYV-VQLF 415

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT---LIMSEIFQNILIKWKPITN 145
                + + ++  ++       G+   +    +L       L+ +      L +      
Sbjct: 416 IPDYTVSLIIALPLAFVVTFGAGVVMERLVIRHLYTRPLETLLATFGISIALQQLAKNIF 475

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G     +              +      +  V        + +      A ++  L+RT 
Sbjct: 476 GTQARPLTAP---------DWLSGALTLNDIVSISNIRVAIFVLALIFLALLLFILKRTR 526

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +    R +  N     S+        +  F + S   G+AG          S     +  
Sbjct: 527 LGLEVRAVTQNPGMAASMGIDPDRINMLTFGLGSGIAGIAGVAIGLYAQVTSEMGANYIV 586

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
              +  +V    + ++       +++  +              +  F+ S  +   T MV
Sbjct: 587 QSFMTVVVGG--VGNVWGTLAGASMIGFLQ-----------KGIEWFNPSNTLAAQTYMV 633

Query: 326 IALFLVILMRSHSLLRLRTPSN 347
           + + L I  R   ++ L+  + 
Sbjct: 634 LFVILFIQFRPKGIVALKGRAA 655


>gi|241664788|ref|YP_002983148.1| inner-membrane translocator [Ralstonia pickettii 12D]
 gi|309780403|ref|ZP_07675153.1| amino acid uptake ABC transporter [Ralstonia sp. 5_7_47FAA]
 gi|240866815|gb|ACS64476.1| inner-membrane translocator [Ralstonia pickettii 12D]
 gi|308920796|gb|EFP66443.1| amino acid uptake ABC transporter [Ralstonia sp. 5_7_47FAA]
          Length = 334

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 62/324 (19%), Positives = 130/324 (40%), Gaps = 16/324 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+Y LLL   + A     Y   +  ++L + +FA   ++++G  GLLS      +    Y
Sbjct: 16  VLYGLLLVALIAAPLVGAYPVFVA-KLLCFALFASAFNLLLGYTGLLSFGHAAFFGGAGY 74

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
               +     ++  L +          G+I+GL +++ +G Y A+ TL ++++     ++
Sbjct: 75  VAGYMMRDLHVTPELGLLAGTAAGAFIGLIVGLLAIRRQGIYFAMITLALAQMLYFFCLQ 134

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
             P T G+ G+    R                F    +  ++ +YYV+L +   +  +I+
Sbjct: 135 -VPFTGGEDGLQGVPR-------------GKLFGVIDLSSDLTLYYVVLVIVVAAFLLIV 180

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
               +      + I++N+    SL       KL AF +S+A  G+AG+         +  
Sbjct: 181 RTIHSPFGQILKAIKENEPRATSLGYDTDRFKLLAFVLSAALTGLAGSLKTLVLGFETLT 240

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-FNM 318
              +S +  VI + ++GG+  LS      A++I +      +  +   +      +    
Sbjct: 241 DVHWSMSGSVILMTLVGGLGILSGPLLGAALVIALENKLGDIGSFLAGATGIDGFNILGE 300

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
             TT+      + +L     ++  
Sbjct: 301 SVTTVTGAIFVICVLTFRRGIMGE 324


>gi|121606420|ref|YP_983749.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120595389|gb|ABM38828.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 340

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 117/309 (37%), Gaps = 28/309 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS      +   AY         G +  + I    +
Sbjct: 49  FVMKLLCFGLFACAFNLLLGFTGLLSFGHAAFFGSAAYVTGWFVKAQGWTPEMAILAGTV 108

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +G  G+++GL +++ +G Y A+ TL ++++     ++    T G+ G+    R      
Sbjct: 109 GAGLIGLVVGLVAIRRQGIYFAMITLAIAQMVYFFCLQAP-FTGGEDGLQGVPR------ 161

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F    +  +  MYY ++ +  L    I  +  +      + IR+N+    
Sbjct: 162 -------GNLFGMLSLQSDNAMYYFVVAVFVLCFLFISRIVNSPFGQVLKMIRENEPRAI 214

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   KL AF +S+A  G+AG+         +     +S +  VI + +LGG+ + 
Sbjct: 215 SLGYQVDRYKLLAFVLSAALAGLAGSLKTLVMGFATLSDVHWSMSGEVILMTLLGGVGTF 274

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   I+I +  L       +                 ++ +   L +L     ++ 
Sbjct: 275 FGPVMGAGIVISLQNLLADKVGSWVT--------------VIIGVIFVLCVLAFRKGVVG 320

Query: 342 LRTPSNFLE 350
                    
Sbjct: 321 ELQAFRERR 329


>gi|284044094|ref|YP_003394434.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283948315|gb|ADB51059.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 356

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 65/342 (19%), Positives = 128/342 (37%), Gaps = 11/342 (3%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              +   LA+   ++L   L        I+ + I  LI ++   GL    G  G++S   
Sbjct: 8   RAGLWPPLALGLAIVLVASLVGGAGDVVIERVAILALINMVLVVGLWTFSGVTGVVSFGH 67

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           V   AIGAY    L     +   L   +   +     +    P+       + I+ L+ +
Sbjct: 68  VSFAAIGAYVCAFLTIPVPMKRGLFPEMPGFLDFLLTVHTDFPT------AIVISGLVAA 121

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                +   +  +   +AGI     L  +   + +  +  R  S+ +     +       
Sbjct: 122 GFALVLAPAFVRLDGVQAGIATLALLAVVYNVLLNWEQVTRGSSTMIGVPADLTLSTAAG 181

Query: 191 CFLSAS-IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
             ++A  I     R+ +    R  R++  A  SL   ++  +  A+A+S+  +G  GA +
Sbjct: 182 WAVAAVCIAWAFARSRVGLRARAAREDAAAARSLGLRVVGDRTVAWALSAFVVGCGGALY 241

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A      +PD F  S   +V+++++LGG+ SLS     T +   + EL   +    +  +
Sbjct: 242 AHFITTFNPDQFYLSLTFVVLAMLVLGGIGSLSGAVLGTVVYSLLAELLRRLQGGQWTGV 301

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                +  +    L+++ L      R   L   R     + R
Sbjct: 302 DLPAGTAEVVLAALLLLMLI----KRPRGLTGGREIPWPVPR 339


>gi|189352532|ref|YP_001948159.1| branched-chain amino acid transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|189336554|dbj|BAG45623.1| branched-chain amino acid transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 316

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 97/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +  +   +Y + A G ++V G LG+++        +GA   +                
Sbjct: 8   VINGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSCIGLLQNHFPDLGSV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + ++   +      +G    +     L  A  +   I    +                
Sbjct: 68  PTLCIALSAAAVVCAAVGYTIERVAYRPLRKAPRLAPLITAIGVSILLQTLAMMIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    +++    + A ++L + +T +  A R I
Sbjct: 128 LAFPQLLPTDPINVIKATDTTPGAVISMTEIVIVVVAFLVMAGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      +     F   + F + SA   +AG   A+        M  F   +   +  
Sbjct: 188 AENPGVASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        IL  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVILGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|51245121|ref|YP_065005.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Desulfotalea psychrophila LSv54]
 gi|50876158|emb|CAG35998.1| probable high-affinity branched-chain amino acid ABC transporter,
           permease protein [Desulfotalea psychrophila LSv54]
          Length = 355

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 65/360 (18%), Positives = 122/360 (33%), Gaps = 57/360 (15%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L   V  ++    L A+    Y+ +       Y + A GL +++G  G +S+     +
Sbjct: 5   ISLFLFVIVIVGLHLLTASTGSLYLLTQLTMSAYYSLLAIGLCLLMGHAGQISMGHAGFF 64

Query: 75  AIGAYSYVILGSRYGLS-------------------------------IWLLIPVSAMIS 103
           AIG Y    L +   +S                                W    ++  ++
Sbjct: 65  AIGGYLSASLTTHNMVSSAETGWVQGLSSLGLLHAGEDMFGDALLVLAPWPACLMAIAVA 124

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
               +++G+P LK +G YLA+ATL    I   +++          GI        L    
Sbjct: 125 ALVALLLGIPILKLKGHYLAMATLGFGIIVYRLVL-ATEFFGEADGISDVPAFAILPG-- 181

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                        +   +  YY+   + F    ++  L R+ +  A R I   + A  S+
Sbjct: 182 -------LSIVGDLDVRVENYYIAAVILFFGFVLLRNLTRSRVGRALRAIHSAEDAADSM 234

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              +   KL  F +S+ F   AG         I P      +++  ++IV +GGM +L  
Sbjct: 235 GINVAHYKLITFVLSAVFAAFAGVCLTHYNGGIGPSEAGMMKSVRYVAIVAVGGMANLWG 294

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
           +   + +L  +                     F      +    L LV+L     +  ++
Sbjct: 295 VLTMSMVLNYL----------------SLRGIFGSYDDAVFGTVLVLVMLFAPDGIFSIK 338


>gi|311109058|ref|YP_003981911.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310763747|gb|ADP19196.1| inner-membrane translocator 58 [Achromobacter xylosoxidans A8]
          Length = 322

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 52/308 (16%), Positives = 115/308 (37%), Gaps = 4/308 (1%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            KI+     +   +L   + +   + ++ ++  + LIY + A  L +++G   ++S    
Sbjct: 3   RKIIVNTIGLLLFVLVPAIASATGESFLINLMTRFLIYAIAAISLDLILGYGAMVSFGHA 62

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             + +G Y   I G        L     +  +    ++M   ++        +   +   
Sbjct: 63  AFFGLGGYVIGIAGFHLAQGDTLFGWSGSNAA----LVMWPLAVASAALAGLVVGFLSLR 118

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                 I             +   + + G    S+      P   +      YYV L + 
Sbjct: 119 TSGVQFIMITLAFGQMLYFILVGLMVYGGDDGLSIDARNTLPGLDMNSPTTFYYVCLALM 178

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                    +  +    A ++I+ N +    L    +  +L+AF +S+A  G+AGA +A 
Sbjct: 179 TAWVLACRRIVNSPFGMALQSIKQNPRRSIGLGLAPLRYRLTAFVLSAAGTGLAGALWAN 238

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               +SPDM  + ++  ++++VILGGM S+       A+ +G+ ++      ++   L  
Sbjct: 239 YALFVSPDMSAWQKSGELMAMVILGGMGSIFGPVLGVAVYLGLEQVATAWTEHWMLILGP 298

Query: 312 FDCSFNMR 319
                 + 
Sbjct: 299 VLVLVVLF 306


>gi|326693762|ref|ZP_08230767.1| ABC-type branched-chain amino acid transport system, permease
           component [Leuconostoc argentinum KCTC 3773]
          Length = 323

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 85/341 (24%), Positives = 143/341 (41%), Gaps = 43/341 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           KY      LA +  +L+ +        +Y  +  + I I V+ A GL++V+G  G  SL 
Sbjct: 7   KYALGWAGLAGMIFVLIEVMTIVGVIGQYGLTTLVLIGINVIAAVGLNLVIGMSGQFSLG 66

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                A+GAY+  ++ S         L + +   ISGA  +++G+P+L+ RGDYLAIATL
Sbjct: 67  HAGFMAVGAYATALITSAMPNILGFGLSLVIGMGISGAIALLVGIPTLRLRGDYLAIATL 126

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++EI + ++I    IT G AGI+                                  V+
Sbjct: 127 GVAEIIRIVIINL-KITRGPAGIFGIPNFVNWQ-------------------------VV 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
            G+  +   +++   R+    A   +RDN+ A  SL       K+ AF + +    +AG 
Sbjct: 161 FGLSVVVIVLVVNFVRSTTGQAIIAVRDNKIAAASLGINTTKYKVIAFVIGAMLAALAGG 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A+    +SP  + F + II++ IV+LGG+ S+S       IL  +  +          
Sbjct: 221 LRASFIQSVSPQDYTFMQTIIILIIVVLGGIGSMSGTVVTAVILGVLDVVLQNFGP---- 276

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                          +  + L +V++ R   LL     S  
Sbjct: 277 -----------LRMVIYAVVLIVVMIFRPKGLLGTAELSLK 306


>gi|323494090|ref|ZP_08099206.1| putative permease of ABC transporter [Vibrio brasiliensis LMG
           20546]
 gi|323311717|gb|EGA64865.1| putative permease of ABC transporter [Vibrio brasiliensis LMG
           20546]
          Length = 390

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 46/347 (13%), Positives = 97/347 (27%), Gaps = 33/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +  ++ +               + +  S+  + L Y M A  + +V G LG+LSL     
Sbjct: 32  LAAIILIPLANTQLPAGHPLHVETFTISLLGKYLSYAMLALAVDLVWGYLGILSLGHGAF 91

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +A+G Y+  +   R      +                 LP      D    A L++  + 
Sbjct: 92  FALGGYAMGMYLMRQIGDRGVYGNPVLPDFMVFLNWQELPWFWLGFDQFWFAALMVVLVP 151

Query: 134 QNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPS 174
             +   +  +                          +  +  +     +        +  
Sbjct: 152 GALAYVFGYLAFRSRVSGVYLSIITQALTYALMLAFFRNEMGFGGNNGLTDFKDILGYSL 211

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                 I ++         S  +   +  + +      IRD +     +   +   KL  
Sbjct: 212 QQDSTRIALFVATGIALIFSYLLCRSVVSSRLGRVSLAIRDTESRTRFMGYDVDGIKLWV 271

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F +S+   G+AGA +      I+P  F    +I ++  V LGG  +L        ++   
Sbjct: 272 FVLSAVIAGVAGALYVPQVGIINPGEFAPLNSIEIVVWVALGGRATLFGAIVGALVINYA 331

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                            F   F       +     L  +     ++ 
Sbjct: 332 KSW--------------FTVEFPEVWLFALGGLFVLSTMYFPKGIIG 364


>gi|229816641|ref|ZP_04446930.1| hypothetical protein COLINT_03690 [Collinsella intestinalis DSM
           13280]
 gi|229807769|gb|EEP43582.1| hypothetical protein COLINT_03690 [Collinsella intestinalis DSM
           13280]
          Length = 293

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 97/305 (31%), Gaps = 24/305 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ +      +Y + A G ++V G   +L+        IGAY    + S  G+   + +
Sbjct: 6   QYLVNGLSMGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGAYVSFCVTSYLGMPAIVSV 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +  +  A G+++   + K       +A LI +      L     +  G         +
Sbjct: 66  LAAVAVCTALGILIEGLAYKPLRQAGPLAVLITAIGVSYFLQNAAQLVWGATPKNFTSIV 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
            F                            ++    + A ++ +  +T +  A R   ++
Sbjct: 126 SFPVPEFLKAYN----------VSAVSLVTVVACLVIMAGLMWFTGKTKMGKAMRACSED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ SA   +AG    +    + P        I   +  + G
Sbjct: 176 KAAAQLMGINVNRTISMTFAIGSALAAIAGVLLCSYSPVLQPTT-GSMPGIKAFTAAVFG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        +L  +  +          + + F               L +V+L++ 
Sbjct: 235 GIGSIPGAFVGGILLGIIEAMAQAYISTSLANSIVFG-------------VLIVVLLVKP 281

Query: 337 HSLLR 341
             L  
Sbjct: 282 AGLFG 286


>gi|163746733|ref|ZP_02154090.1| inner-membrane translocator [Oceanibulbus indolifex HEL-45]
 gi|161379847|gb|EDQ04259.1| inner-membrane translocator [Oceanibulbus indolifex HEL-45]
          Length = 327

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 53/293 (18%), Positives = 103/293 (35%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +I ++  +  I  +   GL+I +G  GL+S      + +G Y+  IL +       L+ 
Sbjct: 28  PFIITLATKAAILALAGVGLNIALGLGGLVSFGHAAFFGLGGYAMGILAAHAQSYTPLME 87

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +       ++ L +L        +   +         I            +     
Sbjct: 88  SPILIEGTKSMPVIWLVALVVSALAALLIGALSLRTSGVYFIMLTLAFGQMLFYFAISWP 147

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
            + G    S+     FP    +  +  + V   +  +    +  L R     A    R N
Sbjct: 148 AYGGEDGLSIYVRNGFPGLNTLDPLTFFAVAFAILAVVLFFVGRLARAPFGLALSAARQN 207

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +   ++       +L AF +S A  G+AGA FA     +SP MF +  +  ++  VILG
Sbjct: 208 AERVEAVGLAPFRLRLVAFVISGAVTGLAGALFADLNRFVSPTMFSWQTSGEIMVFVILG 267

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           G+  L       A+ I +  +  G++ ++   L        +     M+  + 
Sbjct: 268 GVGRLFGPVAGAALFILLEHVLGGLSEFWHIYLGLLLLLVVLFARGGMIGLIA 320


>gi|163747298|ref|ZP_02154652.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Oceanibulbus indolifex HEL-45]
 gi|161379408|gb|EDQ03823.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Oceanibulbus indolifex HEL-45]
          Length = 342

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 63/338 (18%), Positives = 116/338 (34%), Gaps = 9/338 (2%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  +       + ++  L++F  L      K +  M  Q LI V F  GL I VG+ GL+
Sbjct: 6   KQKRLSAWSTPILLIAILVVFTLLVTLLGDKSLARMAAQTLIRVTFVVGLWIFVGNSGLV 65

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S       AIGAY    L  R  +    L  +   ++ A                     
Sbjct: 66  SFGHAGYMAIGAYCSAWLTLRPQMKGMFLPDLWPYLATAEWHGFPAAVA--------SGL 117

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L       +     +      +    A                    S   +      +V
Sbjct: 118 LAAVIALISGAAILRLSGIAASIATFAFLAIVYTVYSSWEGVTGATSSVVGLTRYADQWV 177

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            LG   ++     W   +A   A R  R+++ A  +    +   +L +  VS+ F G+AG
Sbjct: 178 TLGWASVTVLAAAWYANSASGLALRASREDEVAADASGINMYGHRLISLVVSAFFAGVAG 237

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A F  S   ++P+ F      I ++++++GG+ SL+       +L  ++E    M     
Sbjct: 238 ALFGHSLGVLNPNSFYLGITFITLAMLVVGGIGSLTGAVMGVLVLSIIIEGLVRMERGME 297

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                       +   + +I + ++ ++R   L   R 
Sbjct: 298 IGETTLALPTGAQEIIIGIIMILVL-ILRPAGLTGGRE 334


>gi|150398066|ref|YP_001328533.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
 gi|150029581|gb|ABR61698.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
          Length = 330

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 57/336 (16%), Positives = 126/336 (37%), Gaps = 33/336 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +   I+  + +   L   L         ++  +      + +FA   ++++G  GLL
Sbjct: 10  RKERSPFIVQTVFLGVGLACLLLAPLFFYPVFLMKLL----CFALFACAFNLLLGYTGLL 65

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S      +   AY        +G+   L I V    +   G ++G  +++ +G Y A+ T
Sbjct: 66  SFGHAAFFGGAAYFTAHAVKEWGVPPELGILVGVFGAALLGAVIGFFAIRRQGIYFAMIT 125

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L ++++F    ++                       ++S+ R        ++    MYY 
Sbjct: 126 LALAQMFYFFCLQSGFTRG--------------EDGIQSVPRGHLLGVIDLLQPTNMYYF 171

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +  +  +II  +  +      ++IR+N+    SL  ++   KL+AF +S+A  G+AG
Sbjct: 172 VLTVFVIGIAIIWRIINSPFGMVLKSIRENETRAVSLGYSVRNYKLAAFVMSAALTGLAG 231

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
              A      +     +  +  VI + +LGG+ +L        +++ +        F   
Sbjct: 232 GLKALVFQFATLTDVSWQMSGEVILMTLLGGIGTLIGPIFGAGLVVTLQNYLATSEFPV- 290

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         T +  +   + +L+    ++  
Sbjct: 291 --------------TIITGVVFMVCVLLFRRGIVGE 312


>gi|332530264|ref|ZP_08406210.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
 gi|332040250|gb|EGI76630.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
          Length = 633

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 69/335 (20%), Positives = 133/335 (39%), Gaps = 33/335 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
            L +        AVV+ L L           Y   + I +LI  +FA  L  ++G  G+ 
Sbjct: 314 PLRRPGPAYLTAAVVFALALVAVPVLAPDSPYTLVLLIDLLIAALFAASLHFIMGPAGMH 373

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S      + +GAY   +L    GL + + + V+ + +    ++ G  +++  G YLA+ T
Sbjct: 374 SFGHSAYFGLGAYGAALLVRASGLPMEVALIVAPVAAALGALVFGWFAVRLSGVYLAMLT 433

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L  S+I   I  +W   T G  G+                     +PS ++  +   Y+V
Sbjct: 434 LAFSQITWGITYQWDSFTGGSNGLTGV------------------WPSDWLSDKRAYYWV 475

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            L +  +    +  +  +    A R  RD+     ++       + +AF V+ A  G+AG
Sbjct: 476 TLALVGIGVWWLRRVLFSPFGYALRAGRDSALRADAIGIDAKRMQWTAFVVAGAVAGLAG 535

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A FA S+  ISP+    S+++  + +V+LGG+ +L+           + +       Y+ 
Sbjct: 536 ALFAFSKGSISPESLSVSKSVDGLVMVLLGGIQTLAGPVVGAFTFTWLHDTVARNTDYWR 595

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                           ++   + +++L+    L  
Sbjct: 596 A---------------MLGAIILILVLLFPQGLAG 615



 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 101/305 (33%), Gaps = 17/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS--IWLLI 96
           + +         + A GLS++ G   +++      + +G Y    L  ++  S   W  +
Sbjct: 10  LLNGLASASSLFLVAAGLSLIFGVTRIVNFAHGSFFMVGIYVAYSLVDKFADSLGFWPAL 69

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V+A++ GA G ++ +  L+       +  L+ +     ++        G   +      
Sbjct: 70  VVAALVVGALGALIEILLLRRIYKAPELFQLLATFALVLVIKDVVLYLWGPDELLGPRAP 129

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G                  +  +  ++++    +   + L L RT      R    +
Sbjct: 130 GLRGA----------VTILGRQFPAYDLFLIVVGPVVLGLVWLLLTRTRFGTLVRAATQD 179

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +L     +   + FA+ +   G+ GA                        +V++G
Sbjct: 180 REMVSALGVNQAWLFTAVFALGAFLAGLGGALQLPREPA--TLEMDLHTIGAAFVVVVVG 237

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM SL     A  ++    E+     +     L     SF+     +  + +  V++ R 
Sbjct: 238 GMGSLPGAYVAALLIA---EIKAVCIWLGVVDLFGLQISFSKLTLVVDFLVMAAVLVWRP 294

Query: 337 HSLLR 341
             L+ 
Sbjct: 295 WGLMG 299


>gi|160900592|ref|YP_001566174.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160366176|gb|ABX37789.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 332

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 125/302 (41%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             ++++ + +FA   ++++G  GLLS          AY        +G +  L +     
Sbjct: 34  FVMKLMCFALFASAFNLLLGYTGLLSFGHAAFLGGAAYVTGYAIKGWGFTPELAMLAGTA 93

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
                G+I G  +++ +G Y ++ TL ++++   + ++    T G+ G+    R      
Sbjct: 94  GGALLGLIFGWLAIRRQGIYFSMITLALAQMLFFVCLQAP-FTGGEDGLQGVPR------ 146

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F    +  ++ MYYV L +  L+  +I+    +      + I++N+    
Sbjct: 147 -------GKLFGLIDLTSDLTMYYVTLVIVVLAFLLIVRTIHSPFGQVLKAIKENEPRAT 199

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   KL AF +S+A  G+AG+         +     ++ +  VI + ++GG+ +L
Sbjct: 200 SLGYDVARFKLLAFVISAALTGLAGSLKTVVLGFATLSDVHWTTSGHVILMTLMGGLGTL 259

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           S     +A+++ +         +    + +++  +     T +  +   + +L+    ++
Sbjct: 260 SGPILGSAVVVMLENKIGEFGSFLQRLTGVEWFSTLGESVTIVTGLIFVVCVLLFRKGIM 319

Query: 341 RL 342
             
Sbjct: 320 GE 321


>gi|332142256|ref|YP_004427994.1| ABC-type branched-chain amino acid transport system, permease
           component [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552278|gb|AEA98996.1| ABC-type branched-chain amino acid transport system, permease
           component [Alteromonas macleodii str. 'Deep ecotype']
          Length = 392

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 52/348 (14%), Positives = 100/348 (28%), Gaps = 33/348 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
            L    V +  L+F          Y  S+  + L Y + A  + +V G  G+LSL     
Sbjct: 26  FLSTAYVTFCNLVFADGALLHVSDYTVSLLGKYLCYALLALAVDLVWGYCGVLSLGHGAF 85

Query: 74  YAIGAYSYVILGS----------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           + +G Y+  +                         W  IP     S +   ++ +  L  
Sbjct: 86  FTLGGYAMGMYLMRQIGDRGVYGNPDLPDFMVFLNWTEIPWFWAGSSSAIWMVVMVFLGP 145

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG---TTVRSLIRFFRFPS 174
                   TL        + +         A +    R          +      F F  
Sbjct: 146 GLLAFIFGTLAFRSRVSGVYLSIMTQAMTYALMLAFFRNEMGFGGNNGLTDFKEIFSFSL 205

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                ++ ++        +  +I  ++  + +       RD +     +       K+  
Sbjct: 206 QNPSTKLALFVATAIALAVGYAISHFIVSSKMGRVITATRDAESRVRFVGYKPEHYKVWI 265

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F VS+   G+AGA +      I+P  F    +I ++  V +GG  +L        ++   
Sbjct: 266 FVVSAMLAGLAGALYVPQVGIINPGEFSPLNSIEMVVWVAIGGRCTLYGAIIGAIVVSYA 325

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                           +F           +     LV L+    +  L
Sbjct: 326 KT--------------RFTAIMPEAWLFALGGLFVLVTLLLPKGIAGL 359


>gi|260459128|ref|ZP_05807383.1| urea ABC transporter, permease protein UrtC [Mesorhizobium
           opportunistum WSM2075]
 gi|259034682|gb|EEW35938.1| urea ABC transporter, permease protein UrtC [Mesorhizobium
           opportunistum WSM2075]
          Length = 411

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 108/357 (30%), Gaps = 35/357 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGA--TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
           R+     IL  +A++ PLL      A       YI ++  + L Y + A  L +V G  G
Sbjct: 14  RIAITIFILLAVAIIVPLLNLAVSPASAFYIPSYIVALTGKYLCYALLALSLDLVWGYCG 73

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           +LSL     +A+G Y+  +   R   S  +                 LP      D+   
Sbjct: 74  ILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGNPILPDFMVFLNYKELPWFWTGFDHFWF 133

Query: 125 ATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRS 165
           A +++  +   +   +                             +  D  +     +  
Sbjct: 134 AAIMVLAVPGLLAFVFGWFAFRSRVTGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTD 193

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                 F          ++     M  L+  +   +  +        +RD +     L  
Sbjct: 194 FKDILGFNVQADATRSALFAASAVMLALAVFLTWAIVGSKYGKLLMAVRDAESRTRFLGW 253

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                KL AF VS+   G+AGA +      I+P  F+ S +I V+    +GG  ++    
Sbjct: 254 RAENVKLFAFTVSAVMAGIAGALYVPQVGIINPGEFEPSNSIEVVIWAAVGGRGTIVGPI 313

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               ++        G+                      +      V L+    ++ +
Sbjct: 314 IGALLVNAGKSWFTGV--------------LPELWLFALGGLFVAVTLLLPKGIVGM 356


>gi|144901325|emb|CAM78189.1| ABC transporter permease protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 328

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 107/295 (36%), Gaps = 3/295 (1%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + + L  + ++   +    L +     +      ++LI  + A  L +V+G  G++S   
Sbjct: 7   FRRRLAFVVLLILAVAVPPLLSALGHGFYIGFAARVLIMALAALSLDLVMGLGGMVSFGH 66

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +GAY   I          L   ++   +      + +         +   +L  +
Sbjct: 67  AAFLGLGAYVVGIGSWHVFDGSPLPFGLAGSENALIVWPLAMLVSGLAALGIGAISLRTT 126

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +   ++                    + G    +L          +      YY+ LG+
Sbjct: 127 GVHFIMITLAFAQM---LFFLAGGLKTYGGDDGITLYNRSELAGLKLSDPTTFYYLCLGL 183

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                +++L L  +      R +RDN++   +L       KL+AF +S    G+AGA  A
Sbjct: 184 LVTVLALLLRLSSSRFGMVLRGVRDNERRMRALGFPTYRYKLAAFVLSGMICGLAGALLA 243

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
            + +  SP +  +  +  ++ +V+LGGM SL         L+ + E    +  ++
Sbjct: 244 NASEFASPALMSWQRSGELLVMVVLGGMGSLIGPVLGAVALMVLEESLAELTQHW 298


>gi|126732542|ref|ZP_01748340.1| branched-chain amino acid ABC transporter, permease protein
           [Sagittula stellata E-37]
 gi|126706988|gb|EBA06056.1| branched-chain amino acid ABC transporter, permease protein
           [Sagittula stellata E-37]
          Length = 398

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 61/361 (16%), Positives = 126/361 (34%), Gaps = 32/361 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKY---IDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
             I+ +L +  P +L  F   +   ++      +  + +I+ +FA G +I+ G  G LS 
Sbjct: 12  LIIVAILTMCAPFILNPFPADSAMAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYLSF 71

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                  +G+YS V +     ++I   I +S +I+G   +++G  SL+  G Y +I TL 
Sbjct: 72  GHAAFLGVGSYSAVWMFKLLSMNILPAIILSVIIAGLFALVIGFVSLRRSGIYFSILTLA 131

Query: 129 MSEIFQNILIKW----------------KPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
            +++   +                     P   G +              +     +   
Sbjct: 132 FAQMSFALAYSVLTPITNGETGLQVTLDDPRILGMSATADGSIPVTNLFGLEMRAAYDMA 191

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
              +       YYV   +  ++  + + + R+      R I+ NQ              L
Sbjct: 192 VGPWSFTFSAGYYVCAVILLIAFYLSIRIFRSPFGMMLRAIKSNQTRMNYTGLNPKPYTL 251

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
           +AF +S  + G+AG   AA       +  +++ +  V+ + ILGG  +L        ++ 
Sbjct: 252 AAFVISGMYAGLAGGLLAAMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLGAGMIK 311

Query: 293 GVVELCCGMNFYYFNSLLKFDCSF-------------NMRHTTLMVIALFLVILMRSHSL 339
               +   +N    +    F                        + +   LV++     L
Sbjct: 312 YFENIFSKINEATLHGWFDFLPEPLENATVWVLEHFVGAGWHLTLGVIFMLVVIFLPGGL 371

Query: 340 L 340
           +
Sbjct: 372 V 372


>gi|163855492|ref|YP_001629790.1| putative branched-chain amino acid transport permease [Bordetella
           petrii DSM 12804]
 gi|163259220|emb|CAP41520.1| putative branched-chain amino acid transport permease [Bordetella
           petrii]
          Length = 329

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 60/303 (19%), Positives = 125/303 (41%), Gaps = 11/303 (3%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +   ++  ++    L    F           S+ I +LI+ ++A G +++ G +GLLS 
Sbjct: 13  ARSTGLVAAVSRHRVLASIAFFCVFPWIMPYQSVAINVLIFGLYALGFNLLFGYMGLLSF 72

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                   GAY+  IL S+YG   W  +P +  +S    +IMGL +++ RG Y A+ TL 
Sbjct: 73  GHAAFLGTGAYTAGILISQYGAGWWWAVPAAVAMSAVIALIMGLLAIRTRGIYFAMVTLA 132

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +S+     + +                       V             ++  +  YY +L
Sbjct: 133 LSQCVYFFVYQLPASGG-----------ENGLRGVNVAEVSLFGLKLNLLDPMHKYYFIL 181

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
           G   ++ +++  +  +        IR+N+    +    +  +KL  F +S+AF G+AGA 
Sbjct: 182 GFVAIAMAVLSRILASPFGGVIEAIRENESRARACGFDVDRSKLLTFVLSAAFCGLAGAL 241

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            A     ++ +   ++ + +V+ + +LGGM +        A+ + + ++       +   
Sbjct: 242 NAIHLSSVAIETLAYTTSGMVVMLCLLGGMGTYFGPFVGAALFLFIQDVASEYTENWQLY 301

Query: 309 LLK 311
           +  
Sbjct: 302 VGA 304


>gi|118587841|ref|ZP_01545251.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Stappia aggregata IAM 12614]
 gi|118439463|gb|EAV46094.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Stappia aggregata IAM 12614]
          Length = 316

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 60/324 (18%), Positives = 124/324 (38%), Gaps = 25/324 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--------Y 88
            Y  S+ I   IY +    L++  G  GL +      Y +GAY+  IL +         +
Sbjct: 8   FYAVSLLILGGIYAILCLALNVQWGMGGLFNAGIAGFYGVGAYTSAILTTSASSKHLGGF 67

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           GL + L +  +A+++G  G  +    ++ + DYLA+A++ ++EI + +++    +TNG  
Sbjct: 68  GLPVPLGLVGAAILAGLAGWAVARICVRLKSDYLAMASIGIAEILRLVIVNESWLTNGSL 127

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G+    R     T             +  + +I     +  +  L       L  +    
Sbjct: 128 GLSRIPRPLADLT-------------TGRMGDIVFLGFVWFVVLLVYLAASRLHDSPWGR 174

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK-FSENI 267
           + R IRDN+ +  +    +   ++  F +  A +G+AGA  A     +SP          
Sbjct: 175 SLRAIRDNEASAAAAGKNVEKFRIQTFVIGCAIMGIAGALSAHYFRFLSPTATDPLLVTF 234

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +V  +++ GG  +          +  +  +              +    +     L+ + 
Sbjct: 235 LVWVMLMAGGSGNNKGAILGALTIWTLWSVTEIFTNRLPPE---WATRSSFIRMLLVGLL 291

Query: 328 LFLVILMRSHSLLRLRTPSNFLER 351
           L +V+      LL  ++P     +
Sbjct: 292 LQVVLQRFRSGLLPEKSPPVKFRQ 315


>gi|116617599|ref|YP_817970.1| branched chain amino acid ABC transporter permease [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|116096446|gb|ABJ61597.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 292

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 99/303 (32%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A G ++V G + L++      Y +GAY          L+ ++ + +
Sbjct: 8   LINGLMLGSVYALLALGYTMVYGIIKLINFAHGDIYMLGAYFGYFFIKVLHLNFFIALIL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +S   G+++   + +       IA LI +     +L        G         +  
Sbjct: 68  AMAVSAIIGVVIEYIAYRPLRHSPRIAVLISALGISFLLENGMTYLYGSDQRSFPQAIKT 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +                 +        + +    L   +   ++ T +  A R +  +  
Sbjct: 128 VQYHFYG-----------IQVSNIQLIIAVTSIVLMLLLTYIVKNTKMGRAMRAVSADPD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   I       FA+ SA     G       + I P M   +  +      +LGG+
Sbjct: 177 AASLMGININHTISFTFAIGSALAAAGGVLIGLYYNSIDPLM-GMTPGLKAFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +  +                 +F+     ++   L +++L++   
Sbjct: 236 GIIPGAAVGGWLIGILETMVQ-------------ATAFSDYKDAIVYAMLIVILLIKPTG 282

Query: 339 LLR 341
           +L 
Sbjct: 283 ILG 285


>gi|239814590|ref|YP_002943500.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239801167|gb|ACS18234.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 319

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 55/278 (19%), Positives = 117/278 (42%), Gaps = 18/278 (6%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           S+  ++LIY + A G ++++G  GLLS    I + +G+Y+  IL +R  L + L +  + 
Sbjct: 25  SLASEVLIYALAALGCNLLLGYTGLLSFGQGIFFGLGSYTIAILLTRLSLPMPLALLAAV 84

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
            +      ++G  +++ RG Y  + TL  +++F  +      +T G  G+    R  F+ 
Sbjct: 85  AMGALGAAVVGWVAIRQRGTYFVMLTLAFAQMFYFVAYTASGLTGGDNGLLDVPRPAFMD 144

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
           T  +                   Y  +  M  ++  ++L +  +        IRDN+   
Sbjct: 145 TPWK------------------YYAFVAVMFLIAFGLLLRVTDSVFGRTLLAIRDNEDRA 186

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++   +   KL AF +S A  G+AG   A           ++  + +++ I ++GG  +
Sbjct: 187 AAVGYDLKRFKLLAFVISGAVTGLAGGLHAMMTGIAPLSNAEYHTSEMILVITVIGGTGN 246

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           L      +A  + + +    +   +   L     + ++
Sbjct: 247 LFASVLGSAFYVLLADWLSTLWPRWLLLLGLMLIAVSI 284


>gi|261821761|ref|YP_003259867.1| urea ABC transporter permease [Pectobacterium wasabiae WPP163]
 gi|261605774|gb|ACX88260.1| urea ABC transporter, permease protein UrtB [Pectobacterium
           wasabiae WPP163]
          Length = 539

 Score = 89.2 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 83/288 (28%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++ S         +    +++      +       
Sbjct: 266 ITYGLLGVINMAHGEMLMLGAYSTWLVQSLCQQFAPTWLAYYPLLALPVAFFITAGVGMA 325

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      L     + +         +
Sbjct: 326 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRMLFGTQNLEVANPAWLSGGLRLLPNL 383

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+L +  +     L L +T +    R +  N+              + AF +
Sbjct: 384 VLPYNRIAVILFVLGVLLLTWLLLNKTRLGMNVRAVTQNRAMADCCGVPTGRVDMLAFGL 443

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+LGG+  L+    A   L  + ++
Sbjct: 444 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFSLGILNKV 501

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                    ++++ + L I  R   L   +  
Sbjct: 502 LEPQIGAVLGK-------------IVILLLIVLFIQKRPQGLFAFKGR 536


>gi|255658015|ref|ZP_05403424.1| urea ABC transporter, permease protein UrtC [Mitsuokella multacida
           DSM 20544]
 gi|260850218|gb|EEX70225.1| urea ABC transporter, permease protein UrtC [Mitsuokella multacida
           DSM 20544]
          Length = 368

 Score = 89.2 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 45/336 (13%), Positives = 96/336 (28%), Gaps = 27/336 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V   L+L L         +  ++  + L Y + A G+ ++ G  G+LSL   + + +GA
Sbjct: 13  LVFILLVLALLTMPFVLTLFRLTLLGKFLCYAIVALGIDLIWGYTGILSLGHGVFFGLGA 72

Query: 79  YSYVIL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           Y+  +                  GL+           +    + +    L          
Sbjct: 73  YAMAMHLKLVASGSSLPEFMVTGGLTQLPAFWKPFASAPFAFLAIIALPLLLALIVGFST 132

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                +     ++                        +              +  +  YY
Sbjct: 133 FKNRIKGVYFSILSQALAWAFVTIFVGMQAYTGGSNGITGFTTLLGIQLQNPMNLVSFYY 192

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           V + +  ++     WL    I      IRD +   +         K   + +S+   G+A
Sbjct: 193 VAVALLVVTYVFCTWLMSRGIGKILIAIRDGENRTYFTGYDSSRYKTFVYCISAIITGIA 252

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA +      ISP     + ++ ++  V +GG  +L        ++  +           
Sbjct: 253 GAMYVLFAGMISPKELDIAFSVEMVIWVAVGGRGTLIGAVIGALLVNAMKT--------- 303

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    +        + +   LV+L     L+ 
Sbjct: 304 -----GISETAPDMWLYFIGLLFVLVVLFMPKGLVG 334


>gi|170693586|ref|ZP_02884744.1| inner-membrane translocator [Burkholderia graminis C4D1M]
 gi|170141368|gb|EDT09538.1| inner-membrane translocator [Burkholderia graminis C4D1M]
          Length = 316

 Score = 89.2 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 99/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +  +   +Y + A G ++V G LG+++        +GA   +                
Sbjct: 8   VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAIGVLQNHFPGLGNV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + ++  I+     ++G    +     L  A  +   I    +                
Sbjct: 68  PTLCIALAIAAVVCAVVGYTIERVAYRPLRKAPRLAPLITAIGVSILLQTLAMMIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    +++    + A ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPLNVIKATDTTPGAVISMTEIVIIVVAFLVMAGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      +     F   + F + SA   +AG   A+        M  F   +   +  
Sbjct: 188 AENPGVASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        IL  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVILGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|326793438|ref|YP_004311258.1| urea ABC transporter permease [Marinomonas mediterranea MMB-1]
 gi|326544202|gb|ADZ89422.1| urea ABC transporter, permease protein UrtC [Marinomonas
           mediterranea MMB-1]
          Length = 377

 Score = 89.2 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 47/348 (13%), Positives = 96/348 (27%), Gaps = 33/348 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   +      LL     A     Y  ++  + L Y M A  + I+ G  G+LSL     
Sbjct: 26  LSITVLASAANLLLPQDSALYVSTYSITLLGKYLCYAMLALAVDIIWGYCGILSLGHGAF 85

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +A+G Y+  +   R      +                 LP      D    A L+   + 
Sbjct: 86  FALGGYAMGMYLMRQIGDRGVYSNPLLPDFMVFLDWKELPWFWLGMDQFWFAMLMAVIVP 145

Query: 134 QNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPS 174
             +   +  +                          +  +  +     +        F  
Sbjct: 146 GLLAFVFGWLAFRSRVTGVYLSIMTQALTYALLLAFFRNEMGFGGNNGLTDFKEILGFDL 205

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                 + ++ +   +      +   +  + +      +RD +     +       K+  
Sbjct: 206 QADATRVSLFLITAILLAGIFVLSQRILSSRLGKVTLAVRDAEARTRFIGYRTERYKVWL 265

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F  S+   G+AGA +      I+P  F    +I ++  V +GG  +L        ++   
Sbjct: 266 FVYSAVIAGIAGALYVPQVGIINPGEFSPINSIEIVIWVAVGGRGTLIGAIIGALLVNYA 325

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                           +F           +     LV L     L+ L
Sbjct: 326 KT--------------RFTAIMPDGWLFALGAMFVLVTLYLPKGLVGL 359


>gi|170738888|ref|YP_001767543.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168193162|gb|ACA15109.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 337

 Score = 89.2 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 49/296 (16%), Positives = 109/296 (36%), Gaps = 25/296 (8%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++ + +LIY ++A G +++ G  GLLS      +  GAY+  I    +GL     + +  
Sbjct: 50  ALAVNVLIYGLYATGYNLLYGYTGLLSFGHAAFFGTGAYATGIAIGAFGLHPLAAMALGI 109

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +++G   + +G  S++ RG Y A+ TL ++++     ++    T G+ G           
Sbjct: 110 VLAGLLALAIGALSIRSRGIYFAMVTLALAQLVYYAALQASGWTGGENG----------L 159

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                           ++     Y  +L     + + +  +  +        IR+N+   
Sbjct: 160 RGFTVARIGLGPVGLDILDPATKYAFVLACVAAALAAMSRILASPFGAVIEAIRENEARA 219

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +    +   KL AF +S  F G+AGA  A     +  D   +  +   + + ++GG  +
Sbjct: 220 RACGFDVERTKLLAFVLSGLFCGLAGALSALHLSIVPLDSLAYPLSGTAVVMTLVGGAGT 279

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
                     ++ + +       ++                  + +   L +L   
Sbjct: 280 FFGPFLGALAVLVLEDSLSLWTSHW---------------QLALGVVFILFVLFLP 320


>gi|297204640|ref|ZP_06922037.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|297148747|gb|EDY54741.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 944

 Score = 89.2 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 55/324 (16%), Positives = 107/324 (33%), Gaps = 24/324 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   +   LAVV  L L        +           L+  +    + +V G  G +SL 
Sbjct: 347 KVRPLPLALAVVTGLSLVSLATPLWADA-----ITTTLVLSLIILSIVVVTGYAGQVSLA 401

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                  GA+      + +G    L +    + +   G++  LP+++ RG  LAI TL +
Sbjct: 402 AYALAGTGAFLAGHAAADWGWPFELALLAGVLGTVPIGLLFALPAVRTRGVNLAIITLGL 461

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
               + ++ +   ++                         F    S V +      V+L 
Sbjct: 462 GTTLEAMVFQNTDLSTTPG----------SDGIAVGKQTLFGISISGVDHPQRYAAVVLV 511

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +  ++  +RR+        +R N++A  +L   +  AKL AF +S+A   +AG   
Sbjct: 512 LFVAATLVVANVRRSRTGRRLIAVRANERAAAALGIDVRAAKLYAFGLSAAIAALAGVLT 571

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                 +    F    +I  + + ++GG+  L                            
Sbjct: 572 GFRSTSVVLSDFASFGSITALGLAVIGGVGFLVGPLFGATF---------AAGTVGARFG 622

Query: 310 LKFDCSFNMRHTTLMVIALFLVIL 333
                  +     +  I L L ++
Sbjct: 623 DLVLPGLSAWMPLIGGIILVLTLV 646



 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 80/276 (28%), Gaps = 13/276 (4%)

Query: 53  AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112
           A G+ +V    G+L+         GAY    L  ++G++ W       + S   G++  L
Sbjct: 68  AHGIVLVYRGSGVLNFAHGAIGMAGAYVQWELVGQHGVAYWPATACGVLTSAVLGVLTHL 127

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
             L+      ++A L+ +     +L        G +              V   +     
Sbjct: 128 LVLRPLRSASSLARLVGTLAVFIVLTAIAVKRYGDS-----------LELVPGRLPTKLL 176

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
             +         +++     ++  + L  +RT        + +N+ A  SL  +      
Sbjct: 177 TIAGATVSEDRVWLIGIAVAVTVLLHLLYKRTLFGLGTSAVAENEGAAASLGWSPDLIAT 236

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             +A+ SA  G+ G             +     + +  ++V     +S         ++ 
Sbjct: 237 GNWALGSALAGLTGILIVPVIGLSVTGLTTLLLSALAAALVGR--FSSFPVTLTGGLVIG 294

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
            V                     F          AL
Sbjct: 295 VVQSELTRFGSDVTGLAASVPFLFIALVLVARGRAL 330


>gi|307730748|ref|YP_003907972.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|323527111|ref|YP_004229264.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
 gi|307585283|gb|ADN58681.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|323384113|gb|ADX56204.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
          Length = 316

 Score = 89.2 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 99/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           I +  +   +Y + A G ++V G LG+++        +GA   +                
Sbjct: 8   ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAIGVLQNHFPGLGNV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + ++  I+     ++G    +     L  A  +   I    +                
Sbjct: 68  PTLCIALAIAAVVCAVVGYTIERVAYRPLRKAPRLAPLITAIGVSILLQTLAMMIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    +++    + A ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPLNVIKATDTTPGAVISMTEIVIIVVAFLVMAGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      +     F   + F + SA   +AG   A+        M  F   +   +  
Sbjct: 188 AENPGVASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        IL  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVILGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|73542413|ref|YP_296933.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72119826|gb|AAZ62089.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 311

 Score = 89.2 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 96/305 (31%), Gaps = 6/305 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   IY + A G ++V G LG+++        IGA + +            L   
Sbjct: 8   IVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMIGALTALSAILGLQKFAPGLPEW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      +     L +  + +A   L  +     ++         +    +      
Sbjct: 68  LTLVIATLIAMPVCAVLAYSIERIAYRPLRNAPRLAPLITAIGVSIILQTAGMLIWSRNP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L              S+          ++     + A ++  + RT +  A R   +NQK
Sbjct: 128 LTFPQLLPSEPIDIGSTGATITGKEMVIIGLAVMVMAGLLALVNRTKLGRAMRATAENQK 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +     F   + F + +    +AG   A +       M  F   +   +  +LGG+
Sbjct: 188 VAGLMGVNPNFVISATFMIGATLAALAGVMMATNYGNAHFYM-GFIPGLKAFTAAVLGGI 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  L  G      N +       +        I L  V++ R   
Sbjct: 247 GNLAGAMVGGMLLGLIEALGAGYIGDLTNGVFG-----SNYQDVFAFIVLITVLVFRPSG 301

Query: 339 LLRLR 343
           ++  R
Sbjct: 302 IMGER 306


>gi|297528881|ref|YP_003670156.1| inner-membrane translocator [Geobacillus sp. C56-T3]
 gi|297252133|gb|ADI25579.1| inner-membrane translocator [Geobacillus sp. C56-T3]
          Length = 292

 Score = 89.2 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 101/303 (33%), Gaps = 24/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      + +G++      +   +  +  + +
Sbjct: 7   LINGISLGSIYALIALGYTMVYGIVRLINFAHGDVFMVGSFVGFYAVTMLHVGFFPALLL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       GMI+   + K   +   IA LI +     ++        G            
Sbjct: 67  AMASCAVLGMIIERIAYKPLRNAARIAVLITAIGVSLLIEYVTIYLRGAQ---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+         V+      ++L     L   +   + RT I  A R +  + +
Sbjct: 117 PEAYPSTLLPDRNLELFGVVISSQSLFILGTSLVLMILLQFIVHRTKIGKAMRAVSHDAE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +     + FA+ SA  G AG  F     +I P M      +      +LGG+
Sbjct: 177 AARLMGINVDNTISATFAIGSALAGAAGVIFGIYYTKIDPLM-GILPGLKAFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        +L  +  L  G+ +  +     F             + L L+++ R   
Sbjct: 236 GIIPGAMVGGLLLGVIESLVSGLGYSLWRDGAAF-------------VILILILIFRPAG 282

Query: 339 LLR 341
           L  
Sbjct: 283 LFG 285


>gi|114769128|ref|ZP_01446754.1| ABC transporter permease protein [alpha proteobacterium HTCC2255]
 gi|114550045|gb|EAU52926.1| ABC transporter permease protein [alpha proteobacterium HTCC2255]
          Length = 326

 Score = 89.2 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 54/325 (16%), Positives = 115/325 (35%), Gaps = 15/325 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +  +  LL   FLG    + Y  ++  +++I  +   GL++V+G  G +S      + IG
Sbjct: 9   IICIILLLSVPFLGLILDEPYYITLATKVVILAIAGAGLNLVLGYGGFVSFGHAAFFGIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y   IL S       ++     +      +I+   ++   G +  +  ++         
Sbjct: 69  GYVSGILASHALNYYPIIEWPFIIEGTTQMLIILPLAMLISGGFAFLIGMLCLRTSGVYF 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I            +      + G    S+     FP    +     + +   +      I
Sbjct: 129 IMITLAFAQMVYYFAISWPAYGGEDGLSVYLRNNFPGLNTMDGFSFFSICFVLLIFVLFI 188

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           I  +  +    A ++ + N +   ++    I  +L AF +S A  G+AGA +      +S
Sbjct: 189 ISRIVNSNFGLALQSAKQNPERVAAVGIEPIKVQLIAFVISGAITGLAGALYTDLNRFVS 248

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P +  +  +  ++  VILGG   L       A+ I + +   G+   +            
Sbjct: 249 PSVLSWHTSGEIMVFVILGGTARLFGPLVGAALFIILEQFLGGITENW------------ 296

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                 +   L +V+L     ++ +
Sbjct: 297 ---QFWLGFILIIVVLFAKGGIIGM 318


>gi|73540691|ref|YP_295211.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72118104|gb|AAZ60367.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 404

 Score = 89.2 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 48/350 (13%), Positives = 100/350 (28%), Gaps = 32/350 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  + V    L+           Y  ++  +I+ + + A  L +V G  G+LSL   + 
Sbjct: 37  LVVAVGVPVCALMVPEGHPLHLSAYALTLIGKIMCFALAAIALDLVWGYCGILSLGHGLF 96

Query: 74  YAIGAYSYVILGSRYG----------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           +A+G Y+  +   R                + +    +     G      +L        
Sbjct: 97  FALGGYAMGMYLMRSIGREGVYKSDLPDFMVFLDWKELPWFWHGTEHLWYALLLVVLVPG 156

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT--------VRSLIRFFRFPSS 175
           +   +         IK   ++     +  A  L F                 R   F  +
Sbjct: 157 VLAWLFGFFAFRSRIKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRIADFAIA 216

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  ++ +             ++  + +      +RD +          +  KL  +
Sbjct: 217 APQTRTALFVLTFLALIAGFVACRYIVTSKLGRVVTAVRDAEMRVMFSGYNPLGYKLFVW 276

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
             S+   G+AGA +      I+P       +I +   V +GG  +L        ++ G  
Sbjct: 277 TFSAVLCGVAGALYVPQVGIINPGEMSPGNSIEMAVWVAVGGRGTLIGPVIGAFLVNGAK 336

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
            +                  F      L+     LV L     ++ L   
Sbjct: 337 TMFTAY--------------FAEYWLFLLGAMFVLVTLYLPDGVIGLWKR 372


>gi|154243897|ref|YP_001409470.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154163019|gb|ABS70234.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 362

 Score = 89.2 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 80/345 (23%), Positives = 139/345 (40%), Gaps = 19/345 (5%)

Query: 1   MSIFSLRLNKYDKILCLLA--VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSI 58
           M+IF +R ++    L L+A  V  PLL    +          ++   +LI    A GL++
Sbjct: 17  MAIFQIREDRIGIRLLLIAAFVAVPLLHAAGVPPFAGDYLFSAVLTPLLILATAAIGLNL 76

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKF 117
           +VG  G +SL       +GAY+   +         L    ++   S   G++ G+PSL+ 
Sbjct: 77  LVGYCGQISLGAGAFMGVGAYAAYNVSVHLPGLPLLATFLLAGAASAVVGLVFGIPSLRI 136

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           +G YLA+ATL          ++   ITN  A   V      +                 V
Sbjct: 137 KGLYLAVATLAAQFFLDWAFLRVGWITNYSASGSVTAPPLVIAGWH-------------V 183

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
              +  Y ++L +  + A     L R  +   W  IRD   A   +    + +KL+AFA+
Sbjct: 184 DSPVERYLLVLAVAAIVALGAANLVRGNLGRQWMAIRDMDIAAEIIGIRPMQSKLTAFAI 243

Query: 238 SSAFIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           SS  +G+AGA +A  +     P  F    +  ++ IVI+GG+ S+       A +  +  
Sbjct: 244 SSFILGLAGALWAFVNLRAWEPYAFSIDRSFQLLFIVIIGGLGSIIGCFLGAAFIWLLPL 303

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              G+    + S+     +       +    + + ++   H L R
Sbjct: 304 AVEGI--PRWLSIPIAADAAANLTLGVFGALILITLIFEPHGLAR 346


>gi|89069275|ref|ZP_01156638.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
 gi|89045151|gb|EAR51219.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
          Length = 350

 Score = 89.2 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/342 (14%), Positives = 128/342 (37%), Gaps = 13/342 (3%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           ++   ++    ++  L+   F                I I+++      +++G  G++S 
Sbjct: 9   DRPRSLVLTALLLGVLISLAFAPFLFPGVRSLETAATICIFILLVASYDLLLGYTGIVSF 68

Query: 69  NCVIAYAIGAYSYVILGSR---YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
              + + +GAY   +  +       ++ L     A+ +    +++GL SL+ R  + A+ 
Sbjct: 69  AHTMFFGLGAYGVALASTHVGRGWGALALGTLAGALAAAVLALVIGLFSLRVRAIFFAMI 128

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL ++     ++ +   +T G+ G+            +    R        +  +I  YY
Sbjct: 129 TLAVASAVAVLVSQLYQLTGGEDGLTYRIP-----RELTPAFRLGEVFGVRITGKILNYY 183

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++   C     ++L +  +      + +R+N     ++   +++ +++A  +S+A   +A
Sbjct: 184 LIFFCCLALFLLLLRVVNSPFGRVLQAVRENDFRAEAIGYRVVYYRITATCLSAAVAALA 243

Query: 246 GAFFAASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM--- 301
           G+ +A     + PD    F   + ++ +V++GGM ++        I +        +   
Sbjct: 244 GSLYAIWLRYVGPDTTLSFEIMLDILLMVVIGGMGTMYGAVLGAVIFVLAQNYLQNLMGV 303

Query: 302 -NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                    L  +     R    + +   L +      ++  
Sbjct: 304 AADAATGLPLLPELLDPNRWLLWLGVLFILSVYYFPAGIVGR 345


>gi|146296946|ref|YP_001180717.1| inner-membrane translocator [Caldicellulosiruptor saccharolyticus
           DSM 8903]
 gi|145410522|gb|ABP67526.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 311

 Score = 89.2 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 70/338 (20%), Positives = 137/338 (40%), Gaps = 42/338 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K   +  L+ V   +++ + +       YI      I++ ++ A  L+++ G  G  S
Sbjct: 1   MKKRFLVYFLIVVAIYVIITVLMKIGVIDDYIKLNLFLIMLNIILAVSLNLINGITGQFS 60

Query: 68  LNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           L      AIGAY+   +         +L + +S +++  CG+I+GLP L+ +GDYLAIAT
Sbjct: 61  LGHAGFMAIGAYTTAVLTTLEKPFPFYLTVLISGLLAMCCGLIIGLPVLRLKGDYLAIAT 120

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + I+     +  G +GI    +                               
Sbjct: 121 LGFGEIIRVIIQNIDYL-GGASGISDIPQGIDWTGYF----------------------- 156

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
              +  ++  +IL +  ++   A   IR+++ A  ++       K+ AF + + F G+AG
Sbjct: 157 --VITVITVVVILNIINSSFGRAMIAIREDEIAAEAMGINTTLYKVLAFMIGAFFAGVAG 214

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           + ++ S   I PDMF F ++I ++ IV+               +          ++    
Sbjct: 215 SVYSGSFGFIQPDMFNFFKSIDILVIVV---------------LGGLGSISGSIISAIVL 259

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             +     ++      L  + L +++L R   LL  + 
Sbjct: 260 TIISALLQNYPEVRMILYSLILIVIMLFRPQGLLGTKE 297


>gi|326318082|ref|YP_004235754.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374918|gb|ADX47187.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 309

 Score = 89.2 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 99/305 (32%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G + L++        IGA +          ++      
Sbjct: 8   IINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMIGALTSWSCIGLMQEAMPGAPGW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++       +   +L F  + +A   L  S     ++         +    +  +  +
Sbjct: 68  VILLLATIIACVVAAALNFTIEKVAYRPLRSSPRLAPLITAIGMSILLQTLAMIIWKPNY 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+    F     +       +L       AS++  +  T +  A R   +N +
Sbjct: 128 --KPYPTLLPTTPFQIGGAVITSTQVLILAVTAISLASLVYLVNYTKLGRAMRATAENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + F + +    +AG  +A++       M  F   +   +  + GG+
Sbjct: 186 VAALMGVKPDMVISATFIIGAVLAAIAGIMYASNYGTAQHTM-GFLPGLKAFTAAVFGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  +  G        LL      +        I L +++ +R   
Sbjct: 245 GNLAGAVVGGILLGLIEAIGSGYIGTLTGGLLG-----SNYTDIFAFIVLIIILTLRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|268325971|emb|CBH39559.1| putative high-affinity branched-chain amino acid transport system,
           permease protein [uncultured archaeon]
          Length = 303

 Score = 89.2 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/299 (16%), Positives = 114/299 (38%), Gaps = 13/299 (4%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            IY++ A GL+++ G + +++        +GAY+   + +  GL+ +L+IP++ +I    
Sbjct: 18  CIYILLAIGLNLIFGVMKVVNFAHGELLMLGAYAIFWIYTYSGLNPYLVIPLAMIILAIV 77

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G+ +     +       +  + +S     +      +        +              
Sbjct: 78  GVFIERLCFRPIMGTGKLNEIFLSLGLIYLFQNLAAVFWTTDSRSIHSPYSD-------- 129

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                     +   +    +++       ++ L++++  +  A R    N++A   +   
Sbjct: 130 ---VSITIGSINLPVDYIIIIVITAICLIALQLFMKKATLGRAMRATSQNREAATLMGIN 186

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +    + +FA+ SAF   AG+    S   ++P +      I   ++VI+GG+ S+     
Sbjct: 187 VERMDMLSFALGSAFAATAGSLCLISGQMVNPYVGSI-PAIEAFAVVIIGGLGSIPGAII 245

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           A   L     +           LL  + SF+    T+  I L +V+++R   +   +  
Sbjct: 246 AGLTLGIAENIVPLFMQSSV-GLLGLEMSFSAWKDTIAFIILIIVLVIRPTGIFGEKEE 303


>gi|209550761|ref|YP_002282678.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209536517|gb|ACI56452.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 334

 Score = 89.2 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 121/343 (35%), Gaps = 27/343 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+  + RL +    L    +   ++  +      +     ++  +++   +    L +V 
Sbjct: 5   MNNENGRLQRRRGALARDLIGIAVMTAIAAIGYFAFPDNLALLTRMITIALLVLSLDLVT 64

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           G  G+ +L     +  GAY+  IL + Y      L++          G++ G   L+  G
Sbjct: 65  GYCGVATLGHAALFGSGAYAAGILSAHYGINDPLLMMLAGIAGGAIAGLLSGAIILRAHG 124

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
               + ++ +  +F     K    T G  G+         G               F +Y
Sbjct: 125 LPQLVLSIALINLFHEFANKASSWTGGSDGLSGIAPDPIFGI------------FEFDLY 172

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
               ++  + +  +   ++ +L R+      R I+ +     ++  +   A +  + +S 
Sbjct: 173 GQTAFFFGMALLLIVFVLLRFLVRSPFGMLCRGIKQDPLRIRAMGASPKAALIRMYVISG 232

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  G+ GA  A S   +  D   F+++   + +++LGG  SL      T I +   +   
Sbjct: 233 AVAGVGGALNAISTQVVGLDSLSFTQSAEALVMLVLGGTGSLFGALSGTVIFMLFEDYVS 292

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             N +++               T++   L  V+L     L   
Sbjct: 293 AANPFHW--------------LTMVGALLIAVVLFAPKGLYGT 321


>gi|302560559|ref|ZP_07312901.1| ribose ABC transporter, permease [Streptomyces griseoflavus Tu4000]
 gi|302478177|gb|EFL41270.1| ribose ABC transporter, permease [Streptomyces griseoflavus Tu4000]
          Length = 652

 Score = 89.2 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/325 (15%), Positives = 103/325 (31%), Gaps = 39/325 (12%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +V  + +    G   +   + ++G+Q  +  + A+G++ V+ S G + L+     
Sbjct: 29  ALTALIVLVIAMSALSGDFLTADNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVA 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A       +  G+ + L + ++     ACG++ G      +         ++     
Sbjct: 88  ALSATVLAWSATEAGVPVVLAVLLAVATGIACGLVNGFLISYGKLPPFIATLAML----- 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                            V   L  + +    +               ++   +L M  + 
Sbjct: 143 ----------------SVGRGLSLVISQGSPIAFPDSVSHLGDTLGGWLPVPVLVMIVMG 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT I  +   I  N++A       +   KL+ +A S  F   AG   A+   
Sbjct: 187 LITAFVLGRTYIGRSMYAIGGNEEAARLSGLRVKRQKLAIYAFSGLFAAAAGIVLASRLS 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P   +  E   + ++VI      GG    S       IL  +      ++   F   
Sbjct: 247 SAQPQAAQGYELDAIAAVVIGGASLAGGTGKASGTLIGALILAVLRNGLNLLSVSAF--- 303

Query: 310 LKFDCSFNMRHTTLMVIALFLVILM 334
                        ++ + + L +L 
Sbjct: 304 ---------WQQVVIGVVIALAVLF 319


>gi|92115978|ref|YP_575707.1| inner-membrane translocator [Nitrobacter hamburgensis X14]
 gi|91798872|gb|ABE61247.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Nitrobacter hamburgensis X14]
          Length = 345

 Score = 89.2 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 66/308 (21%), Positives = 123/308 (39%), Gaps = 12/308 (3%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +    A    +LL L       + +I      +LIY +    L+I+ G  G  SL   
Sbjct: 20  QAVTLGTATSIVILLLLLAVPLFFKNFIIFQLTTVLIYGIAVLALNILTGGSGQFSLGHS 79

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             YA+GAY+  IL    G++  L +P+S ++  A G + GLP+L+  G YLA+AT  ++ 
Sbjct: 80  AFYALGAYTSAILIEHAGMNYALTLPISGVVCFAMGFLFGLPALRLSGVYLALATFALAV 139

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
               +L                   +  G    ++ +        V  + ++YY  L + 
Sbjct: 140 ATPQLL------------KLGVLEPWTGGVQGLTVDKPDAPFGLPVSQDAWLYYFTLVVA 187

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                  + L  +    A   IRDN+ A  ++   +   K  AF +S+   G+AG   A 
Sbjct: 188 IAIYIASVNLLSSRSGRAMMAIRDNEIAASAMGINVALYKTLAFGISAGITGIAGGLGAI 247

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           +   ++PD F     I +   +++GG+  L       A ++ +  +   ++     ++  
Sbjct: 248 AVQYVAPDSFTIQLAIALFLGMVVGGVGWLPGSIVGAAFIVFIPNVAESVSKGLSGAVSG 307

Query: 312 FDCSFNMR 319
                 + 
Sbjct: 308 ILLFVVIF 315


>gi|113869594|ref|YP_728083.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
 gi|113528370|emb|CAJ94715.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
          Length = 351

 Score = 89.2 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/298 (16%), Positives = 126/298 (42%), Gaps = 15/298 (5%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
           +L + +FA   ++++G  GLLS      +    Y+       +G++  + + +       
Sbjct: 55  VLCFALFACAFNLLIGYTGLLSFGHAAFFGGAGYAAGHAMKVWGVTPEIGLILGTGAGAL 114

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
            G ++G  +++ +G Y ++ TL ++++   I ++    T G+ G+    R          
Sbjct: 115 IGYVVGSLAIRRQGIYFSMITLALAQMLFFICLQAP-FTGGEDGLQGIPR---------- 163

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                 F    +  ++ +YYV L +   + ++I+    +      + I++N+    SL  
Sbjct: 164 ---GKLFGVLPLSDDLTLYYVALAIIVAAFALIVRTVHSPFGQILKAIKENEPRAISLGY 220

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
            +   KL+AF +S+A  G+AG+  A      +     +S +  VI + ++GG+ +LS   
Sbjct: 221 DVDRFKLTAFVLSAALSGLAGSIKALVLGFETLTDVHWSMSGSVILMTLVGGLGTLSGPI 280

Query: 286 KATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +++ +      +  +  + + + +  +     T +  +   + +L     ++  
Sbjct: 281 VGAFVVVALENKLGDIGNFLASVTGISWFGTLGESVTMVTGVIFVICVLTFRRGIMGE 338


>gi|171060265|ref|YP_001792614.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
 gi|170777710|gb|ACB35849.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
          Length = 311

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 55/301 (18%), Positives = 119/301 (39%), Gaps = 14/301 (4%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           +  +  +++L + +FA   ++++G  GLLS      +   AY    L   YGL+  L + 
Sbjct: 24  FYPTFLMKVLCFALFASAFNLLLGFAGLLSFGHAAFFGGAAYVCAALSKNYGLTPELAVL 83

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             A ++   G+ +G  S++  G Y+ + TL ++++   + ++    T G+ G+    R  
Sbjct: 84  AGAAVAAVLGLGVGALSIRRSGIYMTMITLALAQLVFFLAVQLP-FTGGEDGLQGVPR-- 140

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                         F    +   I MY+ +L +      +I     +      + IR+N+
Sbjct: 141 -----------GKLFGLIDLNDNIAMYFFVLAVFVAGFWLIRRTVSSPFGQVLKAIRENE 189

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               SL   +   KL AF +S+A  G+AG   +      S     +  +  V+ + +LGG
Sbjct: 190 PRAISLGYDVARYKLLAFVLSAALAGVAGGLKSLVFQLASLTDVHWHMSGEVVLMTLLGG 249

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + +++  A     ++ +          +   ++       +      ++   L +  R  
Sbjct: 250 LGTIAGPAVGALTIVTLENELADKVGSWVTVIMGVIFVVCVLAFRRGLVGEILALRGRRS 309

Query: 338 S 338
            
Sbjct: 310 G 310


>gi|300313997|ref|YP_003778089.1| urea transport system, permease component protein [Herbaspirillum
           seropedicae SmR1]
 gi|300076782|gb|ADJ66181.1| urea transport system, permease component protein [Herbaspirillum
           seropedicae SmR1]
          Length = 376

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 56/346 (16%), Positives = 111/346 (32%), Gaps = 32/346 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L  +    LLF    A     Y  ++  + + Y M A  L +V G  G+LSL   + +
Sbjct: 24  IVLALLPVCNLLFPAGSALHVSSYTVALVGKFMCYAMAALALDLVWGYTGILSLGHGVFF 83

Query: 75  AIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           A+G Y++ +                        W   P    ++      M L  L    
Sbjct: 84  ALGGYAHGMYLMRAIGRDGVYQSDLPDFMVFLNWKAYPWYWWMTDHFWFAMLLVVLVPGL 143

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSF 176
                         + +           A + +  R    +          R   F  + 
Sbjct: 144 LAFVFGYFAFRSRIKGVYFSIITQAMTFAFMLLFFRNDTGFGGNNGFTDFKRILGFTITA 203

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
              +  +Y V LG+ F +  +   +  + +    + +RD++     +    ++ KL  + 
Sbjct: 204 PATKAVLYLVTLGLLFGALVLCRMIVTSKLGRVLQGVRDSESRLMFIGYNPLWFKLFVWT 263

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           +S+   G+AGA +      I+P     + +I ++    +GG  +L         + G+  
Sbjct: 264 LSAVICGIAGALYVPQVGIINPSEMSPANSIEMVIWAAVGGRGTLIGPIIGAFTVNGLKS 323

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                          F  +F       + +   LV L     +L L
Sbjct: 324 W--------------FTAAFPDLWLYALGLIFILVTLFLPQGILGL 355


>gi|91977973|ref|YP_570632.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91684429|gb|ABE40731.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 397

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 51/360 (14%), Positives = 105/360 (29%), Gaps = 38/360 (10%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFL------GATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           L++   I  L+     +LL L               Y+ S+  + + Y + A  + ++ G
Sbjct: 10  LDRSATIFLLVLAALGILLPLSNLLLPESSFLHVPTYLISLFGKYVCYAILALSIDLIWG 69

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G+LSL     +A+G Y+  +   R      +                 LP      D 
Sbjct: 70  YCGILSLGHGAFFALGGYAMGMYLMRQIGDRGVYANPVLPDFMVFLNYKELPWYWTGFDM 129

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162
              A L++  +   +   +  +                          +  D  +     
Sbjct: 130 FWFAALMVLVVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRNDFGFGGNNG 189

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +        F          ++ +      +   I   +  + +      IRD +     
Sbjct: 190 LTDFKDILGFNIQADGTRAALFVLSCLALAIGFLICRAVVTSKLGKVLIAIRDAESRTRF 249

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   +   KL  F +S+   G+AGA +      I+P  F  + +I  +  V +GG  +L 
Sbjct: 250 LGYRVETYKLFVFTLSACMAGVAGALYVPQVGIINPGEFAPANSIEAVIWVAVGGRGTLV 309

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             A    ++     +                         ++     LV L+    ++  
Sbjct: 310 GAALGAVVVNYAKTVFTS-------------GPLAPYWLFMLGALFVLVTLLLPKGIIGT 356


>gi|307945421|ref|ZP_07660757.1| putative permease abc transporter protein [Roseibium sp. TrichSKD4]
 gi|307771294|gb|EFO30519.1| putative permease abc transporter protein [Roseibium sp. TrichSKD4]
          Length = 313

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 59/325 (18%), Positives = 118/325 (36%), Gaps = 29/325 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +   L L     +    +++     +ILI  + A  L  ++G   ++S        +G
Sbjct: 12  VILFLALALVPLYSSVFDDRFVLLFATRILILALAALSLDFILGLGAMVSFGHAAYLGLG 71

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL +      W+  PV+ ++S     I G  SLK RG Y  + TL   ++     
Sbjct: 72  AYAVGILAAHDIWDAWISFPVAILVSAIFAAITGAISLKTRGVYFIMITLAFGQMAYYTA 131

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                                    +    R   F +     +   Y ++L +   + ++
Sbjct: 132 TSLSAYGG--------------DDGLTMWGRSEFFGTDLFANDTSFYLLVLAILLGAYAL 177

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  +  +      + +R N+    +L       +L+AF ++    G+AGA  A   + +S
Sbjct: 178 LKRIAASRFGRVLKGVRQNEARLHALGIDPFGYRLAAFVIAGVLAGIAGALMANQTEFVS 237

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P    +  +  +I +V+LGG+  L          + + E+  G   ++            
Sbjct: 238 PAYMSWHRSGELIVMVVLGGLGYLHGAILGAIAYLMLEEVLSGYTQHW------------ 285

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                +    L LV+L     +L L
Sbjct: 286 ---RLIFGPLLILVVLYARGGILGL 307


>gi|227824481|ref|ZP_03989313.1| inner-membrane translocator [Acidaminococcus sp. D21]
 gi|226904980|gb|EEH90898.1| inner-membrane translocator [Acidaminococcus sp. D21]
          Length = 321

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 53/303 (17%), Positives = 95/303 (31%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G +++ G L L++      Y +GAY   I  + + L  +  + +
Sbjct: 37  LINGLSLGSIYALIALGYTMIYGILKLINFAHGDIYMVGAYIGYIATTVFHLPFFPSLLI 96

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   +   GM++   + +   +   IA LI +      L              +      
Sbjct: 97  AMAGAALVGMLIERVAYRPMRNAPRIAILITAIGVSFFLEN-----------GMILLASP 145

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T  S      +    ++       +L     L  ++   +  T I  A R +  +  
Sbjct: 146 QPRTFSSDFAASVYNVGGLVINSQQIIILGSTIVLMLALTYIVNYTKIGKAMRAVSFDAD 205

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   I       FA+ SA     G       + I P M   +  I      +LGG+
Sbjct: 206 AARLMGINIDRVISMTFALGSALAAAGGVLVGIYYNSIDPLM-GMAPGIKAFVAAVLGGI 264

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        IL  V  L  G     F     F               L L++L +   
Sbjct: 265 GIIPGAMVGGIILGIVEALVSGFISSTFRDAAAF-------------AILILILLYKPQG 311

Query: 339 LLR 341
           L  
Sbjct: 312 LFG 314


>gi|207722635|ref|YP_002253071.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206587817|emb|CAQ18399.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 299

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 57/302 (18%), Positives = 120/302 (39%), Gaps = 41/302 (13%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             ++ + + I  + A  + + + S GLL++       IGAY+  +L     +   + +  
Sbjct: 11  YSNLVLTLGINALLALSIYLTL-SCGLLAMANAAFMGIGAYTSALLTMNAEMPFPVALLG 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +      +++G P+L+  G YLA+ATL   E+ + +++  +  T G  G+    +L  
Sbjct: 70  GMLAPAVVAVVIGRPTLRLSGVYLAMATLGFGEVVRVLILNTENWTGGALGLNGIPQLTE 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                       +     L+  ++  +RR+ +  A+  I++++ 
Sbjct: 130 WWH-------------------------VALAVALTLFVLARMRRSKVGRAFEAIKEDET 164

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +   KL AF + +   G+AGA  A     I P+ F F   + ++++ ILGG 
Sbjct: 165 AAGLMGINVAGTKLLAFTLGAVIAGLAGALNAHLTFFIGPNEFGFDRGVEILTMTILGGT 224

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           + L+     + IL  + EL      +                  +  + L L++L     
Sbjct: 225 SGLTGPVLGSVILSLLPELLRAFKDF---------------RLVVNGLILMLIVLFLPKG 269

Query: 339 LL 340
           + 
Sbjct: 270 IW 271


>gi|323706037|ref|ZP_08117607.1| inner-membrane translocator [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534651|gb|EGB24432.1| inner-membrane translocator [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 294

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 94/288 (32%), Gaps = 10/288 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GA++     + + L     + +
Sbjct: 8   LINGLSLGSIYALIALGYTMVYGIMKLINFAHGDIYMVGAFTGFFASTYFHLGFIPSLLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++S   G+ +   + +   D   I+ LI +     +L           G  +      
Sbjct: 68  AMLVSLILGVTIERVAYRPLRDKSKISILITAIGVSLLLEN---------GGIILLSPQV 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                      + F +  +        + +    +   + L + +T +  A R +  +  
Sbjct: 119 RTYPQIFKQHMYSFFNGIITISNQQIVIFVVSIIMMVGLQLIIYKTKMGKAMRAVSTDPD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA   +AG       + I P M      +      +LGG+
Sbjct: 179 AARLMGVNVDRTVSFTFAIGSALAAVAGVLVGIYYNSIDPLM-GIMPGLKAFIAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             +        ++  +  L  G     +   + F     +       +
Sbjct: 238 GIIPGAMVGGLLMGVIEALVSGYGSSLYRDGVSFAILIIILLIKPTGL 285


>gi|91780605|ref|YP_555812.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693265|gb|ABE36462.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 332

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 67/291 (23%), Positives = 111/291 (38%), Gaps = 14/291 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +N + +    +A+V  +++   L  T        +   I+IY + A G + +  + G+LS
Sbjct: 4   MNIWTQRTFCIAIVLIVVVGFALPWTGVSNSALFLTTMIMIYAIVAQGTNFLYSTAGILS 63

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           +     + +GAY   I   RY +     + +S        ++ G P+ + +G Y AI T 
Sbjct: 64  VAQGALWGVGAYVAAIGLQRYNIGFGFALLLSIPAGAIVAILTGYPAKRVQGHYFAIVTF 123

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +EIF  +       T G  G+ VA R                   SF+      Y V 
Sbjct: 124 AFAEIFVIVGNNAVGWTGGNQGLIVAGRPLAG--------------LSFLSDLQANYLVA 169

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                 S    + L+R+         + N     SL   ++  +L AFAVS A  G+ G 
Sbjct: 170 FLCFLGSLIAAVLLQRSGFGTRLAAAKTNSALAVSLGMNVVRDRLIAFAVSGAAAGIGGV 229

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
            +A       P  F     I  + IV+LGG   L      +A+ + V    
Sbjct: 230 LYAYLTRYAQPGSFDVWAGITSLLIVMLGGRGYLLGPFIGSAVTLYVPAAL 280


>gi|50121073|ref|YP_050240.1| putative branched-chain amino acid transport system, permease
           [Pectobacterium atrosepticum SCRI1043]
 gi|49611599|emb|CAG75047.1| putative branched-chain amino acid transport system, permease
           component [Pectobacterium atrosepticum SCRI1043]
          Length = 524

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 84/288 (29%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY+  ++ S         +P   +++      +       
Sbjct: 251 ITYGLLGVINMAHGEMLMLGAYATWLVQSLCQQFAPAWLPYYPLLALPVAFFITAGVGMA 310

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      L     + +         +
Sbjct: 311 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRMLFGTQNLEVANPAWLSGGLRLLPNL 368

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+L +  +     L L +T +    R +  N+              + AF +
Sbjct: 369 VLPYNRIAVILFVLGVLLLTWLLLNKTRLGMNVRAVTQNRAMADCCGVPTGRVDMLAFGL 428

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+LGG+  L+    A   L  + ++
Sbjct: 429 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFSLGILNKV 486

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                    ++++ + L I  R   L   +  
Sbjct: 487 LEPQIGAVLGK-------------IVILVLIVLFIQKRPQGLFAFKGR 521


>gi|33594942|ref|NP_882585.1| putative branched-chain amino acid transport system permease
           [Bordetella parapertussis 12822]
 gi|33565018|emb|CAE39967.1| putative branched-chain amino acid transport system permease
           [Bordetella parapertussis]
          Length = 354

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 80/343 (23%), Positives = 140/343 (40%), Gaps = 23/343 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +R ++      +   +   ++F+ +  T S   + ++ I  L+  + A GL+I+VG
Sbjct: 18  QIFPIRQDR------IFIALLMAVIFVVVPLTASDYLLRAILIPFLLLALAAVGLNILVG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGD 120
             G +SL      A+GAY+    G R+     +  I +    +   G+I G+PSL+ RG 
Sbjct: 72  YCGQISLGTGAFMAVGAYAAWNFGVRFPGMPLVAQILLGGCFATLVGVIFGIPSLRIRGL 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL          ++                     ++    +    F    V   
Sbjct: 132 YLAVATLAAQFFVDWAFLR-------------IPFFTNYSSSGSVSVPPMTFFGLPVQSA 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y ++LG   +   +   L R AI   W  IRD   A   +    ++AKLSAFAVSS 
Sbjct: 179 LEKYLLVLGFVVVFTLLAKNLVRGAIGRQWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            +G+AGA +         P  F  + +  ++ +VI+GG+ S+       A ++ V     
Sbjct: 239 IVGVAGALWGYVHLGSWEPLAFDLARSFQLLFMVIIGGLGSILGSFFGAAFIVLVPVALT 298

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +   +   L     +       +    +   ++   H L RL
Sbjct: 299 NV--PHLLGLSLSVDTAAHIEHMVFGALIVFFLIAEPHGLARL 339


>gi|84387636|ref|ZP_00990653.1| putative ureashort-chain amide or branched-chain amino acid uptake
           ABC transporter permease protein [Vibrio splendidus
           12B01]
 gi|84377481|gb|EAP94347.1| putative ureashort-chain amide or branched-chain amino acid uptake
           ABC transporter permease protein [Vibrio splendidus
           12B01]
          Length = 390

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/349 (14%), Positives = 98/349 (28%), Gaps = 33/349 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +  ++ +     +         + +  S+  + L Y M A  L +V G LG+LSL   
Sbjct: 23  AILAAVILIPLANTMLPSGHPLHVETFTISLMGKYLSYAMLALALDLVWGYLGILSLGHG 82

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +A+G Y+  +   R      +                 LP      D    A L++  
Sbjct: 83  AFFALGGYAMGMYLMRQIGDRGVYGDPVLPDFMVFLDWSALPWFWQGFDQFWFACLMVVL 142

Query: 132 IFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRF 172
           +   +   +  +                          +  +  +     +         
Sbjct: 143 VPGALAYLFGYLAFRSRVSGVYLSIMTQALTYALMLAFFRNEMGFGGNNGLTDFKDIIGL 202

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
                  +I ++        LS      +  + +      IRD +     +   +   KL
Sbjct: 203 SLQSDAVKIGLFVSTGIALILSYIACRMVVTSRLGRVALAIRDTESRTRFMGYDVDGIKL 262

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             F +S+   G+AGA +      I+P  F    +I ++  V LGG  +L        I+ 
Sbjct: 263 WVFVLSAVIAGIAGALYVPQVGIINPGEFAPLNSIEIVVWVALGGRATLFGAIVGALIIN 322

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                              F   F       +     L  +     ++ 
Sbjct: 323 YAKSW--------------FTVEFPEVWLFALGGLFVLSTMYFPQGVIG 357


>gi|94985308|ref|YP_604672.1| inner-membrane translocator [Deinococcus geothermalis DSM 11300]
 gi|94555589|gb|ABF45503.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Deinococcus geothermalis DSM 11300]
          Length = 337

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/329 (13%), Positives = 107/329 (32%), Gaps = 16/329 (4%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-- 85
           L          I    +   +Y + A G ++V G L L++      +  GA     +   
Sbjct: 3   LATLLPFIVNVIVGGLVLGFVYAIIALGYTMVYGVLQLINFAHSEVFVTGAVVGYEVFRV 62

Query: 86  -----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                    L + L +  + ++SG   +++   + +   +   +  LI +     IL   
Sbjct: 63  LAPSPMNGYLKLLLALLAAMVVSGILNVLIERLAYRPLRNAPKLVPLITAIGVSLILQDV 122

Query: 141 KPITNGKAGIYVADRLY-------FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +  G  G +             F               ++ V  +I    +++     
Sbjct: 123 LRVIEGFQGRFDLTYTLPAGFSNKFCAAESSCAALGNALRTAGVDLQIKDIILIVVALLS 182

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              +   + RT +  A R +  ++     +         + F +  A  G++G  F    
Sbjct: 183 LGVLNYLVNRTRLGRAIRAVAQDRVTAGLMGIDANRMISATFLIGGALGGISGVLFGLKV 242

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             ++     F   I+  +  +LGG+ S+        +L  +  L    N +     +   
Sbjct: 243 GTVNAYS-GFDPGIVAFTAAVLGGIGSIPGAVLGGLVLGVIQNLIGVTNVFGQLLGIANL 301

Query: 314 CSFNMRHTTLM-VIALFLVILMRSHSLLR 341
            + +  +  +   + L L+++ +   LL 
Sbjct: 302 EAIDASYQRIGAFLVLVLILIFKPTGLLG 330


>gi|268325336|emb|CBH38924.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [uncultured archaeon]
          Length = 303

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/299 (16%), Positives = 114/299 (38%), Gaps = 13/299 (4%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            IY++ A GL+++ G + +++        +GAY+   + +  GL+ +L+IP++ +I    
Sbjct: 18  CIYILLAIGLNLIFGVMKVVNFAHGELLMLGAYAIFWIYTYSGLNPYLVIPLAMIILAIV 77

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G+ +     +       +  + +S     +      +        +              
Sbjct: 78  GVFIERLCFRPIMGTGKLNEIFLSLGLIYLFQNLAAVFWTTDSRSIHSPYSD-------- 129

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                     +   +    +++       ++ L++++  +  A R    N++A   +   
Sbjct: 130 ---VSITIGSINLPVDYIIIIVITAICLIALQLFMKKATLGRAMRATSQNREAATLMGIN 186

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +    + +FA+ SAF   AG+    S   ++P +      I   ++VI+GG+ S+     
Sbjct: 187 VERMDMLSFALGSAFAATAGSLCLISGQMVNPYVGSI-PAIEAFAVVIIGGLGSIPGAII 245

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           A   L     +           LL  + SF+    T+  I L +V+++R   +   +  
Sbjct: 246 AGLTLGIAENIVPLFMQSSV-GLLGLEMSFSAWKDTIAFIILIIVLVIRPTGIFGEKEE 303


>gi|91789190|ref|YP_550142.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91698415|gb|ABE45244.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas sp. JS666]
          Length = 388

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 69/325 (21%), Positives = 142/325 (43%), Gaps = 20/325 (6%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              + A  S  ++  M   +L+Y     GL++  G  G+ +      + IG+Y+  +L S
Sbjct: 82  VALIAAFHSSHFVLLMLCGVLLYSTACLGLTVQFGYSGVANFAGAAFFGIGSYATAVLAS 141

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              +   L+I +S + +   G ++ LP L+ RG Y A+ T+    +F+  +       N 
Sbjct: 142 HTAIPHALVILISGLSAAVIGSLLILPVLRTRGHYAALVTIAFGILFKTFIE-----VND 196

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             G     ++  +     SL   F      + + +    + L M     +++  L R+ +
Sbjct: 197 VLGGPQGLQVPGMKLFGLSLNEGFSLFGLEISFYVTYALLSLAMFAGVYALVNALERSWV 256

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             +   +R ++ A  +    I+  K+ AF + + F G+AGA +      ++P+ F F ++
Sbjct: 257 GLSMDVVRTDETAASTFGLHIVRWKVIAFTMGNFFAGIAGALYGMIIAFVAPNNFTFGDS 316

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           ++++SIVILGG+ +++ +  A  I++ + E    +  Y                  L   
Sbjct: 317 LLMLSIVILGGLGNIAGLIPAAIIVLILPEKLQVIQEY---------------RFLLYAA 361

Query: 327 ALFLVILMRSHSLLRLRTPSNFLER 351
            + +++L RS  LL  +T   F  +
Sbjct: 362 LVIVILLFRSQGLLPRKTRIFFARK 386


>gi|27382937|ref|NP_774466.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27356110|dbj|BAC53091.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 339

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 68/300 (22%), Positives = 126/300 (42%), Gaps = 16/300 (5%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             +L  L +     + +I      +LIY +    L+I+ G  G  SL     YA+GAY+ 
Sbjct: 31  LVVLAALLIAPVFVKNFIIFQMTMLLIYGLAVLALNILTGGSGQFSLGQSAFYAVGAYTT 90

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL--IK 139
            +L   + ++  L +PV+ ++    G + G P+L+  G YLA+AT  ++     +L    
Sbjct: 91  AVLMEHFNINYALTLPVAGVVCFGFGFLFGQPALRLSGVYLALATFALATAMPQLLKLNF 150

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
            +  T G  G+ V       G  +   +               +YY  L +        +
Sbjct: 151 LEHWTGGVQGLVVTKPDAPFGLPMSQDMW--------------LYYFTLVVVIAIYIFSV 196

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L R+    A+  IRDN+ A  ++   +   K  AF VS+A  G+AG+  A +   ++PD
Sbjct: 197 NLLRSRSGRAFMAIRDNEIAASAMGVDVALYKTLAFGVSAAITGIAGSLGAIAVQFVAPD 256

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            +  +  I +   +++GG+  L       A +I V  +  G++     ++        + 
Sbjct: 257 SYTITLAISLFLGMVVGGVGWLPGSIVGAAFIIFVPNIAEGISKGLSGAVFGVLLFAVIY 316


>gi|323691315|ref|ZP_08105590.1| hypothetical protein HMPREF9475_00452 [Clostridium symbiosum
           WAL-14673]
 gi|323504655|gb|EGB20442.1| hypothetical protein HMPREF9475_00452 [Clostridium symbiosum
           WAL-14673]
          Length = 296

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 62/305 (20%), Positives = 125/305 (40%), Gaps = 33/305 (10%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            YI ++ + I I+ + A  L+I+ G  G  ++     + IGAY+  ++ +      WL +
Sbjct: 2   SYIITVAVNIAIFALLALSLNIITGYAGQSAMGHAAFFGIGAYTAALMTNAGIS-FWLSL 60

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P + +++ A G ++G+ SL+ R D+LAI T+ ++ +   +      I     G+ V    
Sbjct: 61  PAAMLVTAAAGGLLGVISLRVRDDFLAITTIGINFVMVALFQNM-KIFGASLGMSVTPPT 119

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           +F                           +LL +  L+  +   + ++    A  ++R++
Sbjct: 120 FFGAKMTPMH----------------FLVLLLILIVLTCLLTRKMTKSWFGLALASLRND 163

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  S    +   K+ AF + +A  G+ GA +      I    F F+ +I ++S+V++G
Sbjct: 164 EGAAMSFGINVSQYKILAFILGTAIAGLTGAIYVHRMTFIFSSSFAFTVSISILSMVVVG 223

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++        IL    E+      Y                  L    L L++  + 
Sbjct: 224 GIGTIRGPLLGALILGAAPEVLRFAADY---------------RMILYGGILVLMMRFQP 268

Query: 337 HSLLR 341
             LL 
Sbjct: 269 QGLLG 273


>gi|120555909|ref|YP_960260.1| inner-membrane translocator [Marinobacter aquaeolei VT8]
 gi|120325758|gb|ABM20073.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Marinobacter aquaeolei VT8]
          Length = 377

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/348 (13%), Positives = 98/348 (28%), Gaps = 33/348 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
              L  V +  L      A     Y  ++  + L Y + A  + +V G LG+LSL     
Sbjct: 25  FAALALVTFLHLFMPEDSALHVSAYTVTLLGKYLCYALLAVAVDLVWGYLGILSLGHGAF 84

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +A+G Y+  +   R      +                 LP      D    A +++    
Sbjct: 85  FALGGYAMGMYLMRQIGDRGVYGDPVLPDFMVFLNWQELPWYWQGFDMAWFAFIMVLLAP 144

Query: 134 QNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPS 174
             + + +  +                          +  +  +     +        F  
Sbjct: 145 GLLALVFGFLAFRSRVTGVYLSIITQALTFALMLAFFRNEMGFGGNNGLTDFKDILGFDL 204

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                 + ++        +   +   +  + +       RD +     L   +   +L  
Sbjct: 205 RSDATRLGLFLATGIALAVGYVVCRAIVTSKLGRVSVACRDAEARTRFLGYRVERVQLFV 264

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F VS+   G+AGA +      I+P  F    +I ++  V LGG  +L        ++   
Sbjct: 265 FVVSAMLAGVAGALYVPQVGIINPSEFSPLFSIEIVVWVALGGRATLYGAVIGALLVNYA 324

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             +  G+                      +     LV +     +  L
Sbjct: 325 KTVFTGI--------------MPDAWLFALGALFVLVTVFLPKGIAGL 358


>gi|330815028|ref|YP_004358733.1| Putative branched-chain amino acid ABC transporter integral
           membrane subunit [Burkholderia gladioli BSR3]
 gi|327367421|gb|AEA58777.1| Putative branched-chain amino acid ABC transporter integral
           membrane subunit [Burkholderia gladioli BSR3]
          Length = 324

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 125/302 (41%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             ++++ + +FA   ++++G  GLLS    +  A   Y         G +  L +     
Sbjct: 26  FVMKVMCFALFAAAFNLLIGYTGLLSFGHAMFLATAGYLSGYTIQTLGATPELGVLAGTA 85

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+++GL +++ +G Y A+ TL  +++   + ++                      
Sbjct: 86  AATVVGLVVGLFAIRRQGIYFAMITLAFAQMLYFVYLQA--------------PFTHGED 131

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  ++ +YYV+L +  L+A +I+ +  +        I++N+    
Sbjct: 132 GLQGVPRGRLFGLLDLSSDLALYYVILVVVALAAMLIVRIVHSPFGQVLVAIKENEPRAI 191

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+A  G+AG+         +     ++ + +VI + ++GGM +L
Sbjct: 192 SLGYDTDRFKLLAFVLSAALAGLAGSLKVVVLGFETLGDAYWTMSGLVILMTLVGGMGTL 251

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + E    +     + + +++  S     + +  I     +L     ++
Sbjct: 252 FGPLLGAALIVALEERLGDIGSALASLTGVEWFRSLGESTSIVTGIIFIACVLAFRRGIV 311

Query: 341 RL 342
             
Sbjct: 312 GE 313


>gi|323341216|ref|ZP_08081463.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus ruminis
           ATCC 25644]
 gi|323091410|gb|EFZ34035.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus ruminis
           ATCC 25644]
          Length = 292

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 98/306 (32%), Gaps = 25/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + LL+      Y +GA+          L  +  +  
Sbjct: 8   LINGLSLGSIYALLALGYTMVYGIIKLLNFAHGDVYMLGAFFGYYTIKCLHLGFFGALIS 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +     G+++ + + K   +   I  LI +      L              +      
Sbjct: 68  SMVFCALAGVLVEIIAYKPLLNSPRITMLITAIGVSYFLEN-----------GMTYLFTA 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I+   +    V        + +    L   + + +++T +  A R +  +  
Sbjct: 117 NTRNFPQVIKRVSYDLGPVQVSNIQLLIFITTIILLILLQVIVQKTKMGRAMRAMAVDPD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG       + I   M   +  I      +LGG+
Sbjct: 177 AAALMGINVSGTIAFTFAIGSALAGAAGVLIGMYYNSID-PMMGLTPGIKAFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A    ++  +  +   +               +      +   L +++L+    
Sbjct: 236 GSIPGAAIGGIVIGFLETMFQSIG-------------LSAYKDAAVYAVLIIILLVLPSG 282

Query: 339 LLRLRT 344
           L   RT
Sbjct: 283 LFGKRT 288


>gi|261420416|ref|YP_003254098.1| inner-membrane translocator [Geobacillus sp. Y412MC61]
 gi|319768082|ref|YP_004133583.1| inner-membrane translocator [Geobacillus sp. Y412MC52]
 gi|261376873|gb|ACX79616.1| inner-membrane translocator [Geobacillus sp. Y412MC61]
 gi|317112948|gb|ADU95440.1| inner-membrane translocator [Geobacillus sp. Y412MC52]
          Length = 292

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 100/303 (33%), Gaps = 24/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      + +G++      +   +     + +
Sbjct: 7   LVNGISLGSIYALIALGYTMVYGIVRLINFAHGDVFMVGSFVGFYAVTMLHVGFVPALLL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       GMI+   + K   +   IA LI +     ++        G            
Sbjct: 67  AMASCAVLGMIIERIAYKPLRNAARIAVLITAIGVSLLIEYITIYLRGAQ---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+         V+      ++L     L   +   + RT I  A R +  + +
Sbjct: 117 PEAYPSTLLPDRNLELFGVVISSQSLFILGTSLVLMVLLQFIVHRTKIGKAMRAVSHDAE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +     + FA+ SA  G AG  F     +I P M      +      +LGG+
Sbjct: 177 AARLMGINVDNTISATFAIGSALAGAAGVIFGIYYTKIEPLM-GILPGLKAFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        +L  +  L  G+ +  +     F             + L L+++ R   
Sbjct: 236 GIIPGAMVGGLLLGVIESLVSGLGYSLWRDGAAF-------------VILILILIFRPAG 282

Query: 339 LLR 341
           L  
Sbjct: 283 LFG 285


>gi|326331058|ref|ZP_08197356.1| branched-chain amino acid ABC transporter, permease protein
           [Nocardioidaceae bacterium Broad-1]
 gi|325951099|gb|EGD43141.1| branched-chain amino acid ABC transporter, permease protein
           [Nocardioidaceae bacterium Broad-1]
          Length = 345

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 56/303 (18%), Positives = 112/303 (36%), Gaps = 27/303 (8%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           + + I  + +FA  L +++G  GLLS      +   AY+  ++    G+   + +   A+
Sbjct: 56  VAMDIASWALFAVALDLLLGYCGLLSFGHAAFWGGSAYATGLIAIHLGVPFPVAVLGGAL 115

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +    + +G  S+K  G Y A+ TL  +++   I  +   +T G+ G+    R +F   
Sbjct: 116 FAMVLAVPIGYLSVKRSGIYFAMVTLAFAQMLFFIANQASSLTGGENGLQGVPRSFFGIE 175

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            V +                F YY  L +  L       +  +        IRDN     
Sbjct: 176 AVETD-------------SFFFYYAALPIILLGMWAAWRIVHSPFGRVLVAIRDNAPRAR 222

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           +L   +   KL  F +S+   G+AG  FA S   ++     ++ +  V+ + +LGG+ +L
Sbjct: 223 ALGYDVERYKLIVFVLSAGLSGLAGGVFAVSHGFVALPELHWATSGEVVLMTVLGGIGTL 282

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +++ + +      F                   +       V+L+    +  
Sbjct: 283 WGGVIGAGLIVMLADYLASSGFDGIG--------------IVTGAVFVTVVLLFRRGIWG 328

Query: 342 LRT 344
              
Sbjct: 329 TAR 331


>gi|328952047|ref|YP_004369381.1| ABC-type transporter, integral membrane subunit [Desulfobacca
           acetoxidans DSM 11109]
 gi|328452371|gb|AEB08200.1| ABC-type transporter, integral membrane subunit [Desulfobacca
           acetoxidans DSM 11109]
          Length = 313

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 60/320 (18%), Positives = 121/320 (37%), Gaps = 47/320 (14%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
             T    YI  + + + I ++    L++V G +G  S+      AIGAY   +L      
Sbjct: 24  AGTLLNLYIQQVLMYVGINIILTLSLNLVNGYMGEFSVGHAGFMAIGAYVASLLTVAVFP 83

Query: 91  SIW------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
           + W      L++ +  + +   G+++  PS + RGDYLAI TL  + I +++L     + 
Sbjct: 84  TAWGPLIFPLVLVIGGLAAALAGLVIAFPSFRTRGDYLAIVTLAFNMIVKSVLENIDAV- 142

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G  G     RL                              ++    ++  ++     +
Sbjct: 143 GGPRGYLGMARLTD-------------------------LTWVVFWVLITLLVLRNFIYS 177

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                   IR+++ A   +       K+ AF +S+ F G+AG  +A     I+P  F   
Sbjct: 178 NFGRGVLAIREDELAANLVGVNTPRLKIYAFCLSAFFAGVAGGLYAHLLQFINPRSFSIL 237

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
           ++  ++ +V LGG+ SL+      A+   ++E+   +  + +                  
Sbjct: 238 KSTDMLVMVYLGGVGSLTGSVLGAALYTLLMEVLRPLELWRWVLGPLLLVLL-------- 289

Query: 325 VIALFLVILMRSHSLLRLRT 344
                  ++ R   ++ L+ 
Sbjct: 290 -------MIFRPTGIMGLKE 302


>gi|146284034|ref|YP_001174187.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas stutzeri A1501]
 gi|145572239|gb|ABP81345.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas stutzeri A1501]
 gi|327482357|gb|AEA85667.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas stutzeri DSM 4166]
          Length = 359

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 57/341 (16%), Positives = 103/341 (30%), Gaps = 27/341 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L  +  L L     A     Y  ++  +IL Y + A  L +V G  GLLSL   + +
Sbjct: 26  LAVLVAMPLLHLLPAEHALHVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFF 85

Query: 75  AIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           A+G Y+  +                   W  +P     + +    M L  L         
Sbjct: 86  ALGGYAMGMYLMRQSAGDGLPAFMSFLAWNELPWYWYGTSSFLWAMCLVVLVPGVLAFVF 145

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEI 181
                    + +           AG+ +  R    +              F  S      
Sbjct: 146 GFFAFRSRIKGVYFSIMTQALTFAGMLLFFRNETGFGGNNGFTDFKTILGFSISAPATRA 205

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            ++   + +   S  +   L R+        +RD +             KL  + +S+  
Sbjct: 206 TLFLATVALLAGSLYLGFRLARSKFGRVLTALRDAENRLMFCGYDPRGYKLFIWTLSAVL 265

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AGA +      I+P     +++I     V LGG  +L        ++ G+       
Sbjct: 266 CGLAGALYVPQVGIINPSEMAPTQSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW---- 321

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                     F  +F       +     +V L     ++ L
Sbjct: 322 ----------FTVAFPEYWLFALGALFIVVTLYLPKGVIGL 352


>gi|71734455|ref|YP_274571.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|71555008|gb|AAZ34219.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 355

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 67/328 (20%), Positives = 133/328 (40%), Gaps = 16/328 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +      +  F+ +    +  +  ++ I  L+  +   GL+++ G  G LSL      A+
Sbjct: 27  IGLWSLLVFAFIAVPLLGNDYWFSAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAV 86

Query: 77  GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GA++   +     G+ + L   +  ++S    ++ GLPSL+ +G YL ++TL    + + 
Sbjct: 87  GAFAAYNLQLRVPGMPLLLGFALGGLVSALVALLFGLPSLRIKGFYLLVSTLAAQFVVEW 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L ++   TN  A   +                               Y + LG+  L  
Sbjct: 147 VLTRFSWFTNDNASGVITSPPLI-------------IAGVNFSSPQGRYLLTLGLVVLLF 193

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254
            +   L R  +   W  +RD   A   +   +  AKL AFA+S  ++G+AG+ +A A   
Sbjct: 194 WLARNLLRGELGRNWMAVRDMDTAAAVIGIRLFKAKLLAFAISGFYLGVAGSLWAFAYLG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            + P  F  + +  ++ I+I+GG+ S+       A ++    L   ++      L+    
Sbjct: 254 MVEPHGFDLNRSFQILFIIIIGGLGSVQGNFLGAAFIVLFPILLGNLSALLPVGLIDSGQ 313

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
             N++   L    +   ++     L RL
Sbjct: 314 LENIQKM-LFGALIIAFLIKEPEGLARL 340


>gi|210632506|ref|ZP_03297434.1| hypothetical protein COLSTE_01336 [Collinsella stercoris DSM 13279]
 gi|210159601|gb|EEA90572.1| hypothetical protein COLSTE_01336 [Collinsella stercoris DSM 13279]
          Length = 304

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 99/305 (32%), Gaps = 24/305 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ +      +Y + A G ++V G   +L+        IGAY   ++ S  GL   + +
Sbjct: 17  QYLVNGLSMGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGAYISFVVTSYMGLPAIVSV 76

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +  +  A G+++   + K       +A LI +      L     +  G         +
Sbjct: 77  IAAVAVCTALGILIEGLAYKPLRQAGPLAVLITAIGVSYFLQNAAQLIWGATPKNFTSIV 136

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
            F                            ++    + A ++ +  +T +  A R + ++
Sbjct: 137 SFPVPAFLKAYN----------VSAVSLVTVIACLLIMAGLMWFTGKTKMGKAMRAVSED 186

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ SA   +AG    +    + P        I   +  + G
Sbjct: 187 KAAAQLMGINVNRTISMTFAIGSALAAIAGVLLCSYSPVLQPTT-GSMPGIKAFTAAVFG 245

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        +L  +  +          + + F               L +V+L++ 
Sbjct: 246 GIGSIPGAFVGGILLGIIEAMAQAYISTSLANSIVFG-------------VLIVVLLVKP 292

Query: 337 HSLLR 341
             L  
Sbjct: 293 AGLFG 297


>gi|209515450|ref|ZP_03264316.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209504170|gb|EEA04160.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 337

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/297 (16%), Positives = 115/297 (38%), Gaps = 12/297 (4%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            +   + LGA         +  ++ I  +FA  L +++G  G++SL     + +GAYS  
Sbjct: 33  VIFWIVALGACLMPLNNYLLLNEMAILALFAVSLDLILGYTGIVSLGHAAFFGLGAYSAA 92

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +L   + L   L + +S  ++   G++  +  ++       + TL ++ I   +  K   
Sbjct: 93  LLAKYFNLDPLLGMLLSCGVAAFAGLVTSVLVMRGSDLTRLMVTLGVASILHELANKLNW 152

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+     +   G               F ++    Y   +   F+   +   + 
Sbjct: 153 LTGGADGMTGVPMVPLFG------------HLEFDLFGKVAYTYSIVTLFVLFVVARAVV 200

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           ++    + + IR N     ++   +   + + + +S+A+ G+AGA  A +    S D+  
Sbjct: 201 KSPFGMSLQVIRQNPLRAAAMGVPVNLRRTAVYTLSAAYAGVAGALLAQTTGFASLDVLD 260

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           F  +  V+ ++++GG   L        +   + +    +   Y+   +       + 
Sbjct: 261 FHRSADVLLMLMIGGAGYLYGGIIGAVVFRFMQDRLADITPQYWQFWIGLLLVIIVI 317


>gi|90419100|ref|ZP_01227011.1| permease protein, ABC-type branched-chain amino acid transporter
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90337180|gb|EAS50885.1| permease protein, ABC-type branched-chain amino acid transporter
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 335

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 57/334 (17%), Positives = 128/334 (38%), Gaps = 33/334 (9%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +    +  +     ++  L         +I S+      + +FA   ++++G +GLLS 
Sbjct: 28  QRDLSTIGFVLAGIAVVGLLVAPFYVYPVFIMSVL----CFALFATAFNLLLGYVGLLSF 83

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                +   AY        +G      I + A  +G  G+++G  +++ +G Y A+ TL 
Sbjct: 84  GHAAFFGGAAYFTAHAAKVWGWEPLSAILLGAGGAGLIGLLVGYLAIRRQGIYFAMVTLA 143

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +S++   I ++                       ++ + R +      +   + +YY +L
Sbjct: 144 LSQMIFFIFLQA--------------PFTHGEDGIQGVPRGYLLGVVNLNDPLNIYYFVL 189

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +       +  +  +   +  + IR+N+    SL   +   KL AF +S+A  G+AG+ 
Sbjct: 190 AIFLFGFFAVWRIVHSPFGHVLKAIRENENRTISLGYRVERYKLGAFVMSAAIAGLAGST 249

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            A      +     +  +  V+ + +LGGM ++   A   A+++ +      M+F     
Sbjct: 250 KAIVFQIATLTDVAWQMSGEVVLMTLLGGMGTIFGPAIGAALVVTMQHYFASMDFPV--- 306

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                       T ++ I   L +L+    ++  
Sbjct: 307 ------------TVMIGIIFVLCVLLFRRGIVGE 328


>gi|307151250|ref|YP_003886634.1| urea ABC transporter permease UrtC [Cyanothece sp. PCC 7822]
 gi|306981478|gb|ADN13359.1| urea ABC transporter, permease protein UrtC [Cyanothece sp. PCC
           7822]
          Length = 385

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/351 (13%), Positives = 99/351 (28%), Gaps = 29/351 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++  +   +L    +    L+   L      ++   +  + L   + A G+ ++ G  GL
Sbjct: 13  VKKRQRQFLLEGAIIGGVALILALLMPFILSQFRLKLLGRFLSLCLAALGIDLIWGYTGL 72

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           LSL   I +A+G Y   +  +    +  L    +        +        F      I 
Sbjct: 73  LSLGHGIFFALGGYGLAMYLNLQLPAGQLPEFFTLYGVTKLPLFWQPFHSLFFTVIAIIV 132

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR--------------FFR 171
              +       LI    I      I     L           +               F 
Sbjct: 133 IPSLVAGLLGYLIFRNRIKGVYFSILTQAALLVFFNFFNGQQQLINGTNGLKTDTQTLFG 192

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                   ++  Y + +    L   +  WL         + IRD++             K
Sbjct: 193 ALVGSDGVQLVFYELTILCLILVYLLCRWLTSGRFGRLLKAIRDDEIRVRFSGYDPTGFK 252

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           +  FA+S A  G++GA +      I      + + +I ++  V +GG  +L      T +
Sbjct: 253 VVVFAISGAIAGISGALYTVQSGIIAPSPSLEVAFSIEMVIWVAVGGRGTLIGAIVGTLL 312

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +                        F             +V+ +    ++ 
Sbjct: 313 VNWGKTFLSE--------------QFPEIWLFFQGALFLIVVTVLPAGIIG 349


>gi|209518081|ref|ZP_03266911.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209501487|gb|EEA01513.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 352

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 75/326 (23%), Positives = 139/326 (42%), Gaps = 18/326 (5%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V   L+ F+ +    +  +++++ + +LI  +   GL+ + G  G LSL      ++GAY
Sbjct: 22  VSLVLVAFVAVPLVSNDYWLNAILVPLLILSLAGLGLNFLTGYAGQLSLGSAAFMSVGAY 81

Query: 80  SYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           +   +L     L + + + +  ++SGA G++ GLPSL+ RG YL ++TL        I  
Sbjct: 82  AAYNLLVRLPALPLPVALLLGGLVSGAVGVLFGLPSLRIRGFYLIVSTLAAQFFVVWIFT 141

Query: 139 KWKPI-TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +      N  +G+  A RL      + +                  Y  +LG+  +   +
Sbjct: 142 RVSWFSNNDTSGVLSAPRLVIGHWQIDT--------------PAARYLFVLGVVVVLFLL 187

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRI 256
              + R+ +   W  +RD   A   +   +  +KL AFA+SS  +G+AGA +A A    +
Sbjct: 188 GAGVVRSDLGRRWMAVRDMDIAARVIGIPVGQSKLLAFALSSFVLGIAGALWAFAYLGTV 247

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
            PD F  + +  V+ I+I+GGM S+S      A ++ +  L            +      
Sbjct: 248 EPDGFSLNLSFQVLFIIIIGGMGSISGNLYGAAFIVLLPVLLSNAATALAQIGIG-ADQL 306

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
                 +    +   ++     L RL
Sbjct: 307 QNLQKIIFGTLIIAFLIKEPDGLARL 332


>gi|114707738|ref|ZP_01440632.1| ABC transporter, membrane spanning protein [Fulvimarina pelagi
           HTCC2506]
 gi|114536727|gb|EAU39857.1| ABC transporter, membrane spanning protein [Fulvimarina pelagi
           HTCC2506]
          Length = 382

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/344 (13%), Positives = 99/344 (28%), Gaps = 30/344 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              +A    L++           Y  +   + L   M A  L++  G+ G+L+L     +
Sbjct: 9   FLSIAAFAALIVLAVPLFFGFDGYELNTFARYLCLGMVAMALALSWGTAGILNLGQAAPF 68

Query: 75  AIGAYSYVIL------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
            +GAY   +        S  G     +  ++                      L  A + 
Sbjct: 69  GLGAYIMAMHLKLMNSTSMPGGMPDFMGWMNIETLPWFWQPFHSLGFTLLAGLLFPAAMA 128

Query: 129 M----------SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
                             +I    +   +               +  L     F  +   
Sbjct: 129 FAIGAFIFKGRVSGVFVAIITLAVLVAIQLLFVEEQGYTGGQNGLTGLALLTIFGVTIDN 188

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
           Y +  YY++     +   +   L R+      R +R++      L   +   ++  F+VS
Sbjct: 189 YSLNFYYLVAASLLIVTVLATMLSRSKAGLVLRAVREDPNRARFLGYDVSNYEILVFSVS 248

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           +A  G AG  +       SP     S ++ ++    +GG  SL   A    ++  +    
Sbjct: 249 AAIAGFAGMLYTLVLQFASPTYMSVSFSLSIVIWCAVGGRESLIGAAIGAIVVNMLEGRL 308

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             +              F      ++ +    ++L     L  L
Sbjct: 309 SDV--------------FVEAWLMVLGVLFIAIVLFLPRGLYGL 338


>gi|91976806|ref|YP_569465.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91683262|gb|ABE39564.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 324

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 53/341 (15%), Positives = 114/341 (33%), Gaps = 32/341 (9%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           +       +      ++A     ++   +  T    +     +Q L + + A   ++++G
Sbjct: 7   NSVPTPTTRRPMRDEMIAFALMTIVLAVVPFTGVYPFFV---MQGLCFALLACAFNLLIG 63

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             GLLS    +      Y        + L   L I      +    +I GL +++ +G Y
Sbjct: 64  YGGLLSFGHAMFLGTAGYVSAHALKVWELPPELAIVAGTAAAFGLSVITGLIAIRRQGIY 123

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
            A+ TL +S++   I ++                       ++ + +   F    +    
Sbjct: 124 FAMITLALSQLLYFIYLQA--------------PFTHGEDGIQGIPQGKMFGVIDLQNTT 169

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +Y+V+L    L   II     +      + IR+N+    SL       KL AF +S   
Sbjct: 170 TLYFVVLAGFLLGFLIIYRAINSPFGEVLKAIRENEPRAISLGYKTDHYKLMAFILSGTL 229

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G AGA         S     +S +  ++ + ++GG+ ++        ++I + +   G 
Sbjct: 230 AGFAGALKVFVAQNASLTDVHWSMSGEIVLMTLVGGLGTVFGPVVGAFVIIAMQQYLAGF 289

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                              T +  +     +L     ++  
Sbjct: 290 ---------------GQWVTVIQGVIFVACVLTFRRGIVGE 315


>gi|253688545|ref|YP_003017735.1| urea ABC transporter, permease protein UrtB [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251755123|gb|ACT13199.1| urea ABC transporter, permease protein UrtB [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 539

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 84/288 (29%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY+  ++ S         +    +++      +       
Sbjct: 266 ITYGLLGVINMAHGEMLMLGAYATWLVQSLCQQFAPGWLAYYPLLALPVAFFITAGVGMA 325

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      L     + +       S +
Sbjct: 326 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRMLFGTQNLEVANPAWLSGGLRVLSNL 383

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+L +  +     + L +T +    R +  N+              + AF +
Sbjct: 384 VLPYNRIAVILFVLGVLLLTWILLNKTRLGMNVRAVTQNRAMADCCGVPTGRVDMLAFGL 443

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+LGG+  L+    A   L  + ++
Sbjct: 444 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFSLGILNKV 501

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                    ++++ + L I  R   L   +  
Sbjct: 502 LEPQIGAVLGK-------------IVILVLIVLFIQKRPQGLFAFKGR 536


>gi|114707762|ref|ZP_01440656.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Fulvimarina pelagi HTCC2506]
 gi|114536751|gb|EAU39881.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Fulvimarina pelagi HTCC2506]
          Length = 312

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 67/325 (20%), Positives = 128/325 (39%), Gaps = 34/325 (10%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +     L+ F+ L       Y          Y + A   S++VG +G +S        +G
Sbjct: 9   IIGAALLVAFVLLPFAGLSDYWTYTVTIGFYYALLAASWSLLVGYVGRISFAQAAMSGLG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  +    +GL I L +  +A+I+G  G ++G  +L+  G YL + T+   EI +  +
Sbjct: 69  GYASALGVLEFGLPIGLGLVFAALIAGLVGYVLGWLTLRLHGAYLGLTTIAFGEILRISV 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                +T G  G+ V                            +  YY+ L +     + 
Sbjct: 129 TAEHWLTEGSLGLQVPP-------------------LIPGGSRLEYYYIFLAITVGCLAA 169

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L R+ I   +++IR+++    SL   +   K  AFA+SSAF G+AG  +A     I+
Sbjct: 170 MGLLLRSRIGLFFQSIREDEDGAASLGVAVTTWKCVAFAISSAFAGLAGGLYAHFVQLIA 229

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P M    E  +++++ ++GG  ++   A    +L  ++E    +                
Sbjct: 230 PSMMSLQEMGVILAMAVIGGFHNILYAALGGMLLQVLLEALREVE--------------- 274

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                +  +   LV+    + L  +
Sbjct: 275 QWRLVVFGLVTILVLRFAPNGLFGM 299


>gi|209515793|ref|ZP_03264656.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209503820|gb|EEA03813.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 324

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/302 (15%), Positives = 122/302 (40%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS    +  A   Y         G S  L +     
Sbjct: 27  FVMKVLCFALFAAAFNLLIGYTGLLSFGHAMFLASAGYLTGYAMQTLGFSPELGVVSGTA 86

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+++G  +++ +G Y A+ TL ++++   + ++                      
Sbjct: 87  AATLLGLVVGFFAIRRQGIYFAMVTLALAQMVYFVFLQA--------------PFTHGED 132

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  ++ +Y+V+L +   +  +I+ +  +        I++N+    
Sbjct: 133 GLQGVPRGKLFGLLDLSSDVALYFVVLAVIVAAFLLIVRIVHSPFGQVLVAIKENEPRAV 192

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+   G+AG+     +   +     ++ + +VI + ++GGM +L
Sbjct: 193 SLGYDTDRFKLLAFVLSAGLAGLAGSLKVLVQGFETLSDAYWTMSGLVILMTLVGGMGTL 252

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +    +     + + + +  S     T +  +     +L     ++
Sbjct: 253 FGPLLGAALIVSLEDRLGDIGSALASVTGIDWFRSLGESVTIVTGLIFIACVLAFRRGIV 312

Query: 341 RL 342
             
Sbjct: 313 GE 314


>gi|170699012|ref|ZP_02890069.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
 gi|170136048|gb|EDT04319.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
          Length = 324

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 123/302 (40%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS    +  A   Y         G +  L + V   
Sbjct: 26  FVMKVLTFALFAAAFNLLIGYTGLLSFGHAMFLATAGYGTGYTIQTLGFTPELGVLVGTF 85

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+I+GL +++ +G Y A+ TL  +++   I ++                      
Sbjct: 86  AATLLGLIVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 131

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  ++ +YYV+L +   + + I+ +  +        I++N+    
Sbjct: 132 GLQGVPRGHLFGLVDLSNDVALYYVVLAVIVAACAFIVRIVHSPFGQVLVAIKENEARAI 191

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+   G+AG+         +     ++ + +V+ + ++GGM +L
Sbjct: 192 SLGYDTDRFKLLAFILSAGLAGLAGSLKVLVLGFETLSDAHWTMSGLVVLMTLVGGMGTL 251

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +    +  +  + + + +  S     T +  +     +L     ++
Sbjct: 252 FGPLLGAALIVALEDRLGDIGEWLASVTGIGWFHSLGESTTIVTGLIFIACVLAFRRGIV 311

Query: 341 RL 342
             
Sbjct: 312 GE 313


>gi|158423384|ref|YP_001524676.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158330273|dbj|BAF87758.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 374

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/360 (13%), Positives = 105/360 (29%), Gaps = 39/360 (10%)

Query: 8   LNKYDKILCLLAVVYPLLLFL------FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           L++   I  +L +   +L+                 Y+  +  + L Y + A  + +V G
Sbjct: 7   LDRRGAIFIILVLAAGVLVPAGNLLAPVGSPFHVSDYLVPLLGKYLCYALLAVAVDLVWG 66

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G+LSL     +A+G Y+  +   R      +                 LP      ++
Sbjct: 67  YCGVLSLGHGAFFALGGYAMGMYLMRQIGPRGVYGNPVLPDFMVFLNYKELPWFWLGFNH 126

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162
              A L++  +   +   +                             +  D  +     
Sbjct: 127 FPFAALMVLVVPGLLAFAFGWFAFRSRVTGVYLSIITQAMTFALMLAFFRNDMGFGGNNG 186

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +        +  +       +++       L   I   L  +        +RD +     
Sbjct: 187 LTDFKDILGYSITAGTTRGALFFASAVALVLGYLICRALVVSKYGKVLVAVRDAESRTRF 246

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   +   KL A+ +S+   G+AGA +      I+P  F  + +I  +  V +GG  +L 
Sbjct: 247 LGYKVANYKLVAWTLSAMLAGVAGALYVPQVGIINPGEFAPANSIETVIWVAVGGRGTLV 306

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             A    ++                    F  +        +     +V L     ++ L
Sbjct: 307 GAALGALVV--------------NAGKTWFTGALPEAWLFALGALFVVVTLFLPRGIIGL 352


>gi|170694303|ref|ZP_02885457.1| inner-membrane translocator [Burkholderia graminis C4D1M]
 gi|170140726|gb|EDT08900.1| inner-membrane translocator [Burkholderia graminis C4D1M]
          Length = 323

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/302 (15%), Positives = 124/302 (41%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             ++++ + +FA   ++++G  GLLS    +  A   Y         G S  L +     
Sbjct: 26  FVMKVMCFALFAAAFNLLIGYTGLLSFGHAMFLASAGYVTGYAMQTLGFSPELGVLAGTA 85

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G ++G+ +++ +G Y A+ TL ++++   + ++                      
Sbjct: 86  CATLLGFVVGIFAIRRQGIYFAMVTLALAQMVYFVFLQA--------------PFTHGED 131

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  ++ +Y+V+L +  L+  +I+ +  +        I++N+    
Sbjct: 132 GLQGVPRGKLFGVLDLSSDVALYFVVLAIMVLAFLLIVRIVHSPFGQVLVAIKENEPRAV 191

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+   G+AG+     +   +     ++ + +V+ + ++GGM +L
Sbjct: 192 SLGYDTDRFKLLAFILSAGLAGLAGSLKVVVQGFETLSDAYWTMSGLVVLMTLVGGMGTL 251

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +    +     + + +++  S     T +  +     +L     ++
Sbjct: 252 FGPLLGAALIVALEDRLGDIGSALASTTGVEWFRSLGESVTIVTGVIFIACVLAFRRGIV 311

Query: 341 RL 342
             
Sbjct: 312 GE 313


>gi|320527722|ref|ZP_08028892.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Solobacterium moorei F0204]
 gi|320131887|gb|EFW24447.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Solobacterium moorei F0204]
          Length = 291

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 99/303 (32%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      IY + A G ++V G   L++        +GAY   I    +GL  WL + +
Sbjct: 8   FINGLNIGSIYALIALGYTMVYGIAKLINFAHGDVIMVGAYISFISMK-FGLPWWLAVII 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++    G++M   + K   +   I+ LI +     +L     +  G         +  
Sbjct: 67  SIVVCAVLGVVMEKVAYKPLRNASRISLLITAIGISYLLQNLFQLIFGANPQPYHAFIA- 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +  +   Y        L   + L++ +T +  A R + +++ 
Sbjct: 126 ----------LPALNLGGITIQANYYITFSVSVLLMILLTLFVNKTTMGKAMRAVSEDEG 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+  A   +AG  +A     I+P        I      +LGG+
Sbjct: 176 AAKLMGINVDTTISLTFAIGCALAAIAGILYANCYPMINPT-LGSLPGIKAFIAAVLGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL  +  +                         ++   L L+++ +   
Sbjct: 235 GSIPGAVIGAFILGMIEAMTKAYISSQLTDT-------------IVFAILILMLVFKPAG 281

Query: 339 LLR 341
           +L 
Sbjct: 282 ILG 284


>gi|300311945|ref|YP_003776037.1| branched-chain amino acid ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300074730|gb|ADJ64129.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 401

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/334 (13%), Positives = 91/334 (27%), Gaps = 36/334 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                  +  ++  + L Y   A GL +  G  G+LSL   + + +G Y   +       
Sbjct: 29  FPLTLDMFRLNLVGKYLSYAFVAVGLVLCWGYGGILSLGQGVFFGLGGYCMAMFLKLEAS 88

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF----------------- 133
                   S            + +L    +        +  +                  
Sbjct: 89  DPISTKIQSTPGIPDFMDWNQITALPAMWEPFHSFAFTIFAVLAVPTVLAMLIGMAMFKR 148

Query: 134 -----QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                   ++           I     L      +  L     +       ++ +Y+V  
Sbjct: 149 RVGDVYFSIVTQAIAAILSILIIGQQGLTGGVNGITDLKTLMGWDIRTDHAKLVLYFVNA 208

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
           G+ F       ++  + +      +RD ++        +   K+  F  ++ F  + GA 
Sbjct: 209 GLLFGCILFGRYVLGSKLGRLLVAMRDKEERVRFSGYDVASFKVFVFCAAAMFSAIGGAM 268

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           F      +SP       +I ++    +GG  SL      T ++                 
Sbjct: 269 FTLQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGTLLVNFGKTY----------- 317

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              F  +F      LM      V++   + L  L
Sbjct: 318 ---FSETFPELWLFLMGGLFIAVVMYFPNGLAGL 348


>gi|291449780|ref|ZP_06589170.1| predicted protein [Streptomyces albus J1074]
 gi|291352729|gb|EFE79631.1| predicted protein [Streptomyces albus J1074]
          Length = 698

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 112/326 (34%), Gaps = 26/326 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
            A +  L + L         Y  S+    L   + A  ++++ G  GL +L     +A+G
Sbjct: 360 AAPLLVLCVALVALPGLLDAYTISLAGSALALGLLAVSVTVLTGYAGLPTLGQTAPFAVG 419

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+   L +       + I +SA+ +     + G   ++ RG  + + TL + E+    +
Sbjct: 420 AYTTANLAAAGWTVGPVQILLSALAAAVFSAVTGPAVIRARGTTVLMITLAVGELTSAAV 479

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            + K +T G  G+        L            +    +  E  +Y   L +  ++ + 
Sbjct: 480 NQLKSVTGGADGLVGFPATQAL------------WGGEDLFEESELYTYALVVAAVAVAA 527

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L + R+         R  +    +    +    L A+  + A  G+ G+     +  +S
Sbjct: 528 TLLVLRSPAGKLLTGARGAEARMRASGHPVWRYLLVAYIGAGALAGVGGSVMVTVQQYLS 587

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P    F      +   ++GG TS+        +++   +   G    +            
Sbjct: 588 PADVGFEIAAFALLAAVIGGTTSVVGALFGAGLIVATRDWVAGAWPGHGP---------- 637

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLR 343
                L+ +     + +    L  LR
Sbjct: 638 ----LLLGVLFVAAVYLLPRGLAGLR 659


>gi|153809785|ref|ZP_01962453.1| hypothetical protein RUMOBE_00166 [Ruminococcus obeum ATCC 29174]
 gi|149833963|gb|EDM89043.1| hypothetical protein RUMOBE_00166 [Ruminococcus obeum ATCC 29174]
          Length = 294

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 99/306 (32%), Gaps = 24/306 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+        IY + A G ++V G   +L+        +GAY  +   +R G+S  L +
Sbjct: 5   SYLKDGISLGSIYAIIALGYTMVYGIAKMLNFAHGDVIMVGAYVILTAVTRGGMSPVLAV 64

Query: 97  PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
            +S +     G+++   +    R     +A LI +     +L     +  G         
Sbjct: 65  GLSVIFCTVLGVVIEKVAYSPLRKASSNLAVLITAIGVSYLLQNLALLIFGADAKSFVTV 124

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           +     T+ +           +  +      +L    +   + L++++T    A   + +
Sbjct: 125 VDVPSVTLFN---------GELTIKGITIVTILACVVIMVGLTLFVKKTKPGRAMLAVSE 175

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A   +   +       FA+ S    +AG     +   ++P        I      + 
Sbjct: 176 DRDAAQLMGVNVNATISLTFAIGSGLAAIAGLLLCQTYPTLTPYT-GAMPGIKAFVAAVF 234

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S+        +L  +               + F               L +V+L++
Sbjct: 235 GGIGSIPGAMVGGILLGVIEIFGKAYISSQVADAICF-------------AVLIVVLLVK 281

Query: 336 SHSLLR 341
              L  
Sbjct: 282 PTGLFG 287


>gi|163858069|ref|YP_001632367.1| branched chain amino acid ABC transporter permease [Bordetella
           petrii DSM 12804]
 gi|163261797|emb|CAP44099.1| Branched-chain amino acid transport system, permease component
           [Bordetella petrii]
          Length = 317

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 65/293 (22%), Positives = 128/293 (43%), Gaps = 14/293 (4%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           F  +       +  S   + +I+ + A  L+ ++G  GL +L       +GAY+ V L  
Sbjct: 2   FPLVAPELGLDFYVSFVRRAMIFAIAAASLNFILGFGGLPALGHAGFLGVGAYTVVALAD 61

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
               S W+L P++ + +G C  ++GL  L+ RG YL ++TL  +++   + +  +    G
Sbjct: 62  AGLGSAWILWPLAMVAAGFCAFLIGLVVLRTRGVYLIMSTLAFAQMLYYVAVSLRA-YGG 120

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             G  +  R                  +  +  E   Y+V+L +  L  + +     +  
Sbjct: 121 DDGYTLQARPVIF-------------DAIPLGNEATFYWVVLLLFGLVMAFLNRSSVSRF 167

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
            +A   IRDN+    +L   +    L+AF +S A +G++GA  AA  + +SP M  ++++
Sbjct: 168 GHALMGIRDNETRMRALGYPVSRLLLAAFVISGACMGLSGALLAAHNNFVSPSMMHWTQS 227

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            +++ +V++GG       A      I + E+C  +  Y+   L     +    
Sbjct: 228 AVLLVMVVIGGAGLRWGGALGAIAWIVLEEVCKQLTGYWHLPLGLLLLAIVFL 280


>gi|167818029|ref|ZP_02449709.1| putative branched-chain amino acid ABC transporter integral
           membrane subunit [Burkholderia pseudomallei 91]
 gi|167826392|ref|ZP_02457863.1| putative branched-chain amino acid ABC transporter integral
           membrane subunit [Burkholderia pseudomallei 9]
 gi|226193315|ref|ZP_03788925.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|254186507|ref|ZP_04893024.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254194755|ref|ZP_04901186.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei S13]
 gi|254298685|ref|ZP_04966136.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 406e]
 gi|157808482|gb|EDO85652.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 406e]
 gi|157934192|gb|EDO89862.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|169651505|gb|EDS84198.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei S13]
 gi|225934915|gb|EEH30892.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei Pakistan 9]
          Length = 324

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/302 (16%), Positives = 121/302 (40%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS    +  A   Y         G +  L +     
Sbjct: 26  FVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGTAPELGVLAGTA 85

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+++GL +++ +G Y A+ TL  +++   I ++                      
Sbjct: 86  AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 131

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  ++ +YYV+L +   +   I+ +  +        I++N+    
Sbjct: 132 GLQGVPRGRLFGLVDLSSDLALYYVVLVVIACACFFIVRIVHSPFGQVLVAIKENEPRAI 191

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+   G+AGA         +     ++ + +V+ + ++GGM +L
Sbjct: 192 SLGYDTDRFKLLAFILSATLAGLAGALKVVVLGFETLSDAYWTMSGLVVLMTLVGGMGTL 251

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSL-LKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +    +  +  +   + +  S     T +  +   + +L     ++
Sbjct: 252 FGPLVGAALIVALEDRLGDIGGWLASVTHIDWFRSLGESATIVTGLIFIVCVLAFRRGIV 311

Query: 341 RL 342
             
Sbjct: 312 GE 313


>gi|134293030|ref|YP_001116766.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|161521296|ref|YP_001584723.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
 gi|134136187|gb|ABO57301.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia vietnamiensis G4]
 gi|160345346|gb|ABX18431.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
          Length = 317

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 97/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +  +   +Y + A G ++V G LG+++        +GA   +                
Sbjct: 9   VINGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSCIGLLQNHFPDLGSV 68

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + ++   +      +G    +     L  A  +   I    +                
Sbjct: 69  PTLCIALSAAAVVCAAVGYTIERVAYRPLRKAPRLAPLITAIGVSILLQTLAMMIWSRNP 128

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    +++    + A ++L + +T +  A R I
Sbjct: 129 LAFPQLLPTDPINVIKATDTTPGAVISMTEIVIVVVAFLVMAGLLLLVHKTKLGRAMRAI 188

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      +     F   + F + SA   +AG   A+        M  F   +   +  
Sbjct: 189 AENPGVASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 247

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        IL  + +L  G        +       +        I L +V++
Sbjct: 248 VLGGIGNLGGAMVGGVILGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIIVLV 302

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 303 FRPSGLLGER 312


>gi|83749708|ref|ZP_00946687.1| LivM [Ralstonia solanacearum UW551]
 gi|207738527|ref|YP_002256920.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83723633|gb|EAP70832.1| LivM [Ralstonia solanacearum UW551]
 gi|206591895|emb|CAQ58801.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 299

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 58/302 (19%), Positives = 120/302 (39%), Gaps = 41/302 (13%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             ++ + + I  + A  + + + S GLL++       IGAY+  +L     +   + +  
Sbjct: 11  YSNLVLTLGINALLALSIYLTL-SCGLLAMANAAFMGIGAYTSALLTMNAEMPFPVALLG 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +      +I+G P+L+  G YLA+ATL   E+ + +++  +  T G  G+    +L  
Sbjct: 70  GMLAPAVVAVIIGRPTLRLSGVYLAMATLGFGEVVRVLILNTENWTGGALGLNGIPQLTE 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                       +     L+  ++  +RR+ +  A+  I++++ 
Sbjct: 130 WWH-------------------------VALAVALTLFVLARMRRSKVGRAFEAIKEDET 164

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +   KL AF + +   G+AGA  A     I P+ F F   + ++++ ILGG 
Sbjct: 165 AAGLMGINVAGTKLLAFTLGAVIAGLAGALNAHLTFFIGPNEFGFDRGVEILTMTILGGT 224

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           + L+     + IL  + EL      +                  +  + L L++L     
Sbjct: 225 SGLTGPVLGSVILSLLPELLRAFKDF---------------RLVVNGLILMLIVLFLPKG 269

Query: 339 LL 340
           + 
Sbjct: 270 IW 271


>gi|150019851|ref|YP_001312105.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052]
 gi|149906316|gb|ABR37149.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052]
          Length = 291

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 95/289 (32%), Gaps = 12/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A G ++V G + L++      Y IGA+S     S   L +   + V
Sbjct: 7   IINGLALGSVYALLALGYTMVYGIIQLINFAHGEIYMIGAFSGFYCASTLKLPLIPTLLV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +S   G+I+   + K   +   IA LI +      L     +  G            
Sbjct: 67  AMAVSALSGIIIEKIAYKPLRNSPRIALLITAIGVSLFLQNAMRLLVGSNPKP------- 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  LI         +  +I    +     FL   +   + +T +  A R    + +
Sbjct: 120 ----FPDLINAGSINIGTIQIDIKTILMFGVSAFLVVLLQFIVYKTKVGKAMRASSQDME 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G+AG   A S   I+P M      +      +LGG+
Sbjct: 176 AASLMGINVNNTISLTFAIGSALAGIAGVLVAISYPSITPYM-GAMPGLKAFVAAVLGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            S+         +  +           F+  + F     +       + 
Sbjct: 235 GSIPGALVGGIAIGLLETFAKAYISTNFSDAIVFAILIIILLIKPSGLL 283


>gi|222478665|ref|YP_002564902.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239]
 gi|222451567|gb|ACM55832.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239]
          Length = 395

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/309 (13%), Positives = 92/309 (29%), Gaps = 16/309 (5%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               +   +    L+  +FA G +++ G  GLLS    + YA GAY   I+    G    
Sbjct: 40  FGPSFQIYLFTDFLVVALFALGFNLLYGYTGLLSFGHGLFYAGGAYGVAIVLRDLGPVFA 99

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
            L+           +   +         + +  L +        +           + + 
Sbjct: 100 DLVGSGISPLVTFVVGGVVGLALVVVVAVPVGWLSVRLEEIYFALITLAFGMLGYSLIIQ 159

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEI----FMYYVLLGMCFLSASIILWLRRTAISNA 209
           D       T   ++           + I      Y + + +   +      +  +     
Sbjct: 160 DPAGLTNGTDGIIVLLGSVDIGGGSFRIGARRTYYALTVVVVLAATYGTWRVVNSPFGTV 219

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            + IR++     +L   +   +   F +S+A +G+AG   A      SP +  +S + I 
Sbjct: 220 CKAIRESPDRASALGIDVRHHRWMTFIISAAIVGIAGVLRAGLASVASPGLTHWSTSAIA 279

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           +   ++GG T  S       + + +               +    +            L 
Sbjct: 280 VIATVIGGATYFSGPIVGAFVFLYI------------RWGISRFPTLEAYWELFFGALLI 327

Query: 330 LVILMRSHS 338
            V+L     
Sbjct: 328 GVVLYFKQG 336


>gi|310778218|ref|YP_003966551.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Ilyobacter polytropus DSM 2926]
 gi|309747541|gb|ADO82203.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Ilyobacter polytropus DSM 2926]
          Length = 291

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 94/303 (31%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++      Y  GAY   +  +R  L     + +
Sbjct: 7   LLNGLALGSVYALIAIGYTMVYGIIKLINFAHGDIYMAGAYFGYVAVARLNLGFIPALIL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +S   G+I+   + K   +   I  LI +     +L     +  G            
Sbjct: 67  AMTLSALLGIIIEKVAYKRLRNSPRITLLITAIGMSLLLENGFRLIFGPNPKP------- 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L++   F    +        +      L   +   + +T    A R    + +
Sbjct: 120 ----FPELLKTKIFHLGSLRINNIQLIIFAVSIVLVIILEYIVFKTKTGKAMRASSYDIE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G  G     +  RI P M      +      +LGG+
Sbjct: 176 AAKLMGINVDKIISLTFAIGSALAGAGGILVGIAYPRIEPYM-GIMPGLKAFVAAVLGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L        ++               +  + F               L +V++++   
Sbjct: 235 GVLPGAMLGGLVMGVAETFTKAFISTKLSDAIIFS-------------ILIVVLIVKPDG 281

Query: 339 LLR 341
           LL 
Sbjct: 282 LLG 284


>gi|222106494|ref|YP_002547285.1| ABC transporter membrane spanning protein (branched chain amino
           acid) [Agrobacterium vitis S4]
 gi|221737673|gb|ACM38569.1| ABC transporter membrane spanning protein (branched chain amino
           acid) [Agrobacterium vitis S4]
          Length = 332

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 58/317 (18%), Positives = 108/317 (34%), Gaps = 26/317 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L++              ++G QILI ++FA  L ++VG  G+++L     + +GAY+  
Sbjct: 29  GLIVLALALVPLLGDDYYALGSQILITIIFALSLDLLVGYAGIVTLGHAAFFGVGAYATG 88

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           I            + + AM +G  G ++G   L+     L + TL    +F  I  K   
Sbjct: 89  IASKYGWGEPLSGLLIGAMAAGLVGAVVGAIVLRTARFTLLMLTLCTVFLFGEIANKATW 148

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G             V            F +     Y+    +  L    +  L 
Sbjct: 149 LTGGVDG------------LVGMETWPVLGLYEFDLLGQVGYWFSALVFLLVWLGVRRLV 196

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            +    +   IRDN     ++   +    L  F +S    G+AGA  A     +      
Sbjct: 197 HSPFGQSIMAIRDNPGRAAAIGIAVRPRTLLIFVISCLLAGLAGALQAEVNQFVGLKDMS 256

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  +  ++ ++ LGG   L       A+ +   ++                    +    
Sbjct: 257 FELSATILVMLALGGSGRLYGAIIGPAVYLIAQDILSK--------------DNPVMWQL 302

Query: 323 LMVIALFLVILMRSHSL 339
            + I L +++L     +
Sbjct: 303 WLGIILVVLVLFAPGGI 319


>gi|114707824|ref|ZP_01440718.1| possible ABC transporter, permease protein precursor [Fulvimarina
           pelagi HTCC2506]
 gi|114536813|gb|EAU39943.1| possible ABC transporter, permease protein precursor [Fulvimarina
           pelagi HTCC2506]
          Length = 337

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 57/318 (17%), Positives = 117/318 (36%), Gaps = 29/318 (9%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
            + + +           M  ++L + +FA   ++++G  GLLS      + + AY     
Sbjct: 37  AIGIVVLLILPHYVYPVMIAKVLCFALFAAAFNLLLGFAGLLSFGHAAFFGMSAYVTGYC 96

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
               G +  L I          G+ MGL +++ +G Y A+ TL ++++   + ++    T
Sbjct: 97  LQSLGFTAELGILAGTAAGALLGLAMGLLAIRRQGIYFAMITLALAQMVYFVALQAP-FT 155

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G+ G+    R    G    S                 +YY++LG+  +   I+     +
Sbjct: 156 GGEDGLQGVPRRDLFGIIDMSSNMN-------------VYYLVLGVFCIGLFIVYRTVHS 202

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                 ++IR+N+    SL       KL AF +S+A  G+AG+         S    ++ 
Sbjct: 203 PFGQVLKSIRENEPRAISLGYDADRYKLMAFVLSAALSGLAGSTKVMVFQLASLTDIQWQ 262

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
            +  V+ + +LGG+ ++        I+I +      +                   T + 
Sbjct: 263 MSGEVVLMAVLGGIGTMVGPLVGATIIITLQNELAQI---------------GSVSTIVQ 307

Query: 325 VIALFLVILMRSHSLLRL 342
                  +L     ++  
Sbjct: 308 GAVFVFCVLAFRRGIVGE 325


>gi|115350839|ref|YP_772678.1| inner-membrane translocator [Burkholderia ambifaria AMMD]
 gi|115280827|gb|ABI86344.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia ambifaria AMMD]
          Length = 394

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/347 (13%), Positives = 97/347 (27%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + V    L+     A     Y  ++G +++ Y + A  L +V G  G+LSL   + 
Sbjct: 51  IAIGVGVPLAALVAPESSAFHLSAYAMTLGGKLMCYAIAALALDLVWGYCGILSLGHGLF 110

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 111 FALGGYAIGMYLMREIGHEGKYGSDLPDFMVFLDWHQLPWYWSGTQHLAWALALVVLVPA 170

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            +  +  +          R   F  +
Sbjct: 171 VLAWVFGFFTFRSRVKGVYLSIITQALTFAAMLLFFRNETGFGGNNGFTDFKRIAGFAIT 230

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +  +      L+  +   +  + +      +RD +     L  + +  KL  +
Sbjct: 231 SPGTRTVLLLLTFATLVLAFIVARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 290

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            +S+   G+AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 291 TLSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 350

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                               F       + +   LV L+    ++ L
Sbjct: 351 SFFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGL 383


>gi|329900647|ref|ZP_08272539.1| ABC-type branched-chain amino acid transport system, permease
           component [Oxalobacteraceae bacterium IMCC9480]
 gi|327549423|gb|EGF33987.1| ABC-type branched-chain amino acid transport system, permease
           component [Oxalobacteraceae bacterium IMCC9480]
          Length = 320

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 128/322 (39%), Gaps = 15/322 (4%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
              ++ L               +++L + +FA   ++++G  GLLS      +    Y  
Sbjct: 5   IGYVIVLAALLAAPFWLYPVFLMKVLCFALFACAFNLLIGFTGLLSFGHAAFFGGAGYVA 64

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
               +  GL   + I +  +     G+ MG  +++ +G Y  + TL ++++   + ++  
Sbjct: 65  GYAMATLGLPPEVGILLGTLAGALIGLFMGSFAIRRQGIYFTMITLALAQMLYFVFLQA- 123

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
             T G+ G+    R                     +  ++ +YYV++ +     ++I+ +
Sbjct: 124 KFTGGEDGLQGVPR-------------GKLLGFIDLSNDLTLYYVVMLIAVGGFAVIMRV 170

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +      + I++N+    SL   +   KL AF +S+   G+AGA         +    
Sbjct: 171 VHSHFGQVLKAIKENEPRAISLGYDVDRYKLLAFVLSAGLSGLAGATKTLVLGFETLTDV 230

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRH 320
            +S + +V+ + ++GG+ +LS       I+I +         +  N + +++  +     
Sbjct: 231 HWSMSGLVVLMTLVGGLGTLSGPIVGAVIIIALENKLGSYGTWLANFTSIEWFRTIGQSV 290

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
           T ++ +   + +L     ++  
Sbjct: 291 TIVIGLIFIICVLAFRRGIVGE 312


>gi|225386997|ref|ZP_03756761.1| hypothetical protein CLOSTASPAR_00747 [Clostridium asparagiforme
           DSM 15981]
 gi|225047009|gb|EEG57255.1| hypothetical protein CLOSTASPAR_00747 [Clostridium asparagiforme
           DSM 15981]
          Length = 295

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 53/311 (17%), Positives = 110/311 (35%), Gaps = 37/311 (11%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           YI+ + I   I ++   GL+I+ G +GL S+       +GAY+  IL   YG+  ++ + 
Sbjct: 3   YIEGIMISACINIVCVAGLAILTGYIGLFSMGHACFLCLGAYTAGILTKFYGVPYFIALL 62

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
               ++G   +++G+P+L+ +                                       
Sbjct: 63  GGGAVAGLFSLVIGIPTLRGKMSADCFTIATFGFG----------------------EAT 100

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +     +            +  +      + +  L+        ++        +RD+ 
Sbjct: 101 RVVMANVNHPYVGGALGLSGLESLTTLPRAMILAVLAVFFARNYAKSQHGKIAIAVRDHA 160

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A   +   I   KL    +S+ F G+ G   A     I P++F  + +  +++ V+LGG
Sbjct: 161 DASELIGVNIFHEKLKGLIISAFFCGVGGGMMAHYYTYIVPNIFGGTMSTNLLTAVVLGG 220

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S++  A AT +L    E+   M                     +  + L L + +R  
Sbjct: 221 VCSITGPALATTVLTATPEVLRFM---------------ANWRLPMYGLVLILTMRIRPE 265

Query: 338 SLLRLRTPSNF 348
            L+  +  S  
Sbjct: 266 GLMGYKELSLK 276


>gi|156742273|ref|YP_001432402.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941]
 gi|156233601|gb|ABU58384.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941]
          Length = 328

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 59/326 (18%), Positives = 120/326 (36%), Gaps = 32/326 (9%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +   V   L F  +       YI S  + I +Y   A   +I+ G  G LS      + +
Sbjct: 16  VAIGVGLALAFAAVPLAAPSAYILSFLLTIFMYGALAGSWNIIGGYAGYLSFGHAAFFGL 75

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +L   +G S +L +P++  ++     ++G P L+ RG Y ++ TLI+     ++
Sbjct: 76  GAYTTALLLFYFGWSPFLTLPLAGGVAALFAALVGYPCLRLRGPYFSLVTLILGLAMYSL 135

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            +                          + +             +  Y ++L +  +  +
Sbjct: 136 TLNLPFTQG------------------STGLFLPFLKVDIYTSHVIFYEIMLALLVVVTA 177

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++  + RT +      IR+++ A  +L       KL AF +S+   G+ G  ++  +  +
Sbjct: 178 VLRQIARTKMGIGLAAIREDEDAAGTLGVDATRLKLQAFMLSAFLTGLVGGVYSYYKSYL 237

Query: 257 SPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            P  +F  S +I ++ + + GG  +         +L  V E+                  
Sbjct: 238 DPSFVFATSISITIVLMALFGGRLTWYGPLVGALVLSAVNEVLTTQAP------------ 285

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  +    L  VI+     L+ 
Sbjct: 286 -PQTARIVFGALLIGVIMFLPDGLMS 310


>gi|320007437|gb|ADW02287.1| inner-membrane translocator [Streptomyces flavogriseus ATCC 33331]
          Length = 654

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/311 (16%), Positives = 106/311 (34%), Gaps = 29/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             VV  + + L  G   + + + ++G+Q  +  + A+G++ V+ S G + L+     A+ 
Sbjct: 31  ALVVLLVAMSLLSGDFLTTQNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVAALS 89

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A       +  G+ +WL + ++     ACG + G      +         ++        
Sbjct: 90  ATVLAWSATSAGVPVWLAVIIAVATGLACGFVSGALVAYGKLPSFIATLAML-------- 141

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                         VA  L  + +  R +               ++   +L M  +    
Sbjct: 142 -------------SVARGLSLVISQGRPIPFPDSVSVLGDTLGGWLPVPVLVMIAMGLIA 188

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L L RT I  +   I  N++A       +   KL+ +A+S  F  +AG   A+      
Sbjct: 189 ALILARTYIGRSMYAIGGNEEAARLSGLRVKKQKLAIYALSGLFAAVAGIVLASRLVSAQ 248

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           P   +    +  I+ V++      GG+   S       IL  +      ++   F   + 
Sbjct: 249 PQAAQ-GYELDAIAAVVIGGASLAGGVGKASGTLIGALILAVLRNGLNLLSVSAFWQQVV 307

Query: 312 FDCSFNMRHTT 322
                 +    
Sbjct: 308 IGVVIALAVLL 318


>gi|150377451|ref|YP_001314046.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
 gi|150031998|gb|ABR64113.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
          Length = 342

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/339 (13%), Positives = 112/339 (33%), Gaps = 9/339 (2%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
             +  L ++  +            +  D +   +LI ++   GL   +G+ GLLS   + 
Sbjct: 4   SYVTALILIGVIAAIAIGSQLLGIRLYDRISTNLLISLVLVVGLQTFMGNSGLLSFAHIG 63

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
              +GAY+  +L     +    L  +   +       +           +  A +    +
Sbjct: 64  FMGLGAYTSAVLTIPSQMKGMALPDLYGFMKVVEISPLLALFAAGALAAVVAAVISYPLM 123

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             +                 A  +                 + F + +     V   +  
Sbjct: 124 RLSDAASVI--------TSFALLVVLYTVMNNWSAFTNGPRTLFGLPKTTDMPVAAIVAS 175

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +   + L  + +      R  R+++ A  +L   I   +  AF +++   G+ GA +   
Sbjct: 176 IVVVVALVFKESRTGKLLRASREDEVAAAALGADIPQLRWRAFILAAFIAGIGGALWGHF 235

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
               +P  F   E  ++I+++++GG  +++     T ++    E   G       +    
Sbjct: 236 ITSFAPKAFYLKETFLIITMLVIGGANTVTGAVAGTILITFAYEALRGTEGALNATSFGA 295

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                +    ++ +A+  V+++R   L   R   + L R
Sbjct: 296 GQVVGLTE-IVLALAMIAVMIVRPGGLFPNREIGHILTR 333


>gi|322830804|ref|YP_004210831.1| urea ABC transporter permease [Rahnella sp. Y9602]
 gi|321166005|gb|ADW71704.1| urea ABC transporter, permease protein UrtC [Rahnella sp. Y9602]
          Length = 357

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 55/342 (16%), Positives = 102/342 (29%), Gaps = 27/342 (7%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  L V+  L L           Y  ++  +IL Y + A  L +V G  GLLSL   + 
Sbjct: 24  VLIFLIVMPFLALLPASNPLAISTYTLTLIGKILCYAIVAIALDLVWGYAGLLSLGHGLF 83

Query: 74  YAIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           +A+G Y+  +                   W  +P     +      + L  L        
Sbjct: 84  FALGGYAMGMYLMRQAAGSGLPDFMSFLSWTELPWFWAGTQHFAWALCLIVLVPGALAFV 143

Query: 124 IATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
                     +     ++       G    +  +  +              FP +     
Sbjct: 144 FGYFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPVTATGTR 203

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           + ++   + +   S ++   L R+        +RD +             KL  + +S+ 
Sbjct: 204 VGLFLATVLVLVASLALGFALARSKYGRVLTAVRDAENRLIFCGYDPKGFKLFVWTISAM 263

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             G+AGA +      I+P     + +I     V LGG  +L        I+ G       
Sbjct: 264 LCGLAGALYVPQVGIINPGEMSPTNSIEAAIWVALGGRGTLIGPVIGAGIVNGAKSW--- 320

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                      F  +       ++     LV L     ++ L
Sbjct: 321 -----------FTVAIPEYWQFVLGGMFILVTLFLPQGVIGL 351


>gi|194291187|ref|YP_002007094.1| branched-chain amino acid ABC transporter permease [Cupriavidus
           taiwanensis LMG 19424]
 gi|193225022|emb|CAQ71033.1| putative Branched-chain amino acid transport system permease,
           membrane component [Cupriavidus taiwanensis LMG 19424]
          Length = 339

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/298 (16%), Positives = 126/298 (42%), Gaps = 15/298 (5%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
           +L + +FA   ++++G  GLLS      +    Y+       +G++  + + +       
Sbjct: 43  VLCFALFACAFNLLIGYTGLLSFGHAAFFGGAGYAAGHAMKVWGVTPEIGLILGTGTGAL 102

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
            G ++G  +++ +G Y ++ TL ++++   I ++    T G+ G+    R          
Sbjct: 103 IGYVVGSLAIRRQGIYFSMITLALAQMLFFICLQAP-FTGGEDGLQGIPR---------- 151

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                 F    +  ++ +YYV L +   + ++I+    +      + I++N+    SL  
Sbjct: 152 ---GKLFGVLSLSDDLTLYYVALVIIVAAFALIVRTVHSPFGQILKAIKENEPRAVSLGY 208

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
            +   KL+AF +S+A  G+AG+  A      +     +S +  VI + ++GG+ +LS   
Sbjct: 209 DVDRFKLTAFVLSAALSGLAGSIKALVLGFETLTDVHWSMSGSVILMTLVGGLGTLSGPI 268

Query: 286 KATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +++ +      +  +  + + + +  +     T +  +   + +L     ++  
Sbjct: 269 VGAFVIVALENKLGDIGNFLASVTGISWFGTLGESVTMVTGVIFVICVLTFRRGIMGE 326


>gi|227823571|ref|YP_002827544.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
 gi|227342573|gb|ACP26791.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 329

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 60/335 (17%), Positives = 127/335 (37%), Gaps = 29/335 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++A    L   L         +     ++IL + +FA   ++++G  GLLS      +  
Sbjct: 16  VVAQTVFLGAGLAFLLVAPLFFYPVFLMKILCFALFACAFNLLLGYTGLLSFGHAAFFGG 75

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
            AY        +GL +   +      +   G ++G  +++ +G Y A+ TL ++++F   
Sbjct: 76  AAYFTAHAVKEWGLPVEFGLLAGVAGAALLGAVIGFFAIRRQGIYFAMITLALAQMFYFF 135

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            ++ +                     ++S+ R   F    +     MYY +L +  +  +
Sbjct: 136 CLQAEFTHG--------------EDGIQSVPRGHLFGFIDLSQSSNMYYFVLAVFVIGIA 181

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           II  +  +      ++IR+N+    SL  ++   KL AF +S+A  G+AG   A      
Sbjct: 182 IIWRIINSPFGMILKSIRENETRAISLGYSVRNYKLGAFVMSAALTGLAGGLKALVFQFA 241

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +     +  +  VI + +LGG+ +L       A+++ +        F             
Sbjct: 242 TLTDVGWQMSGEVILMTLLGGIGTLIGPLFGAALVVTLQNYLATSEFPV----------- 290

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               T +  +   + +L+    ++     S    R
Sbjct: 291 ----TIITGVVFMVCVLLFRRGIVGEFYNSRLGRR 321


>gi|320352225|ref|YP_004193564.1| HAAT family amino acid/amide ABC transporter membrane protein 2
           [Desulfobulbus propionicus DSM 2032]
 gi|320120727|gb|ADW16273.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Desulfobulbus propionicus DSM 2032]
          Length = 360

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 62/365 (16%), Positives = 123/365 (33%), Gaps = 51/365 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K  K   L  +   + +          +Y  +       Y +   GL +++G  G +S+ 
Sbjct: 2   KTRKNWSLAGLCLLVAILHLCTVLTGTEYYLTQLTMAAYYGLVIIGLGVLMGYAGQISIG 61

Query: 70  CVIAYAIGAYSYV-------------------------------ILGSRYGLSIWLLIPV 98
               +AIG Y                                         ++ W     
Sbjct: 62  HAGFFAIGGYLAAALTTRDLGPLQEAWAVRWLDSVGLLARGQDLYGAQLLTVTPWAACCC 121

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++    +++G+P LK +G YLA+ATL    I   IL+          GI        
Sbjct: 122 AVLVAALIALVIGIPVLKLKGHYLAMATLGFGTIIYRILLAAPYF-GEADGISEVPGFTL 180

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +              S    + I  +Y+  G+  +   ++L L  + +  A R++  +++
Sbjct: 181 VPAMAN---WDGLVISGDPAHRILNFYLAWGVLIVGMGLLLNLIGSRVGRALRSLHSSEE 237

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  +       +KL  F +S+ +  +AG         I P      +++  +++V +GGM
Sbjct: 238 AAEASGIDTARSKLQVFVLSAVYAAVAGVLLTHFNGGIGPSEASVMKSVRYVALVAVGGM 297

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           T+L         L  +                     F      +  + L +V+L+    
Sbjct: 298 TNLWGTLLMGVGLTFL----------------SLRGVFGAYDDAVFGLILIMVMLLAPEG 341

Query: 339 LLRLR 343
           +L LR
Sbjct: 342 ILSLR 346


>gi|258592152|emb|CBE68457.1| high-affinity branched-chain amino acid ABC transporter (permease
           protein) [NC10 bacterium 'Dutch sediment']
          Length = 300

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 94/303 (31%), Gaps = 15/303 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++      Y +GAY   I+      ++ L  P 
Sbjct: 6   LVNGLTLGSVYALIALGYTMVYGIIELINFAHGEVYMLGAYI-GIVTFSLLTTLHLTSPD 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           SA+      +   L           +A   +    +   +      +     +V      
Sbjct: 65  SAVTLVCMMIAAILFCGACGITIERLAYRPLRTAPRLSPLISALGVSIFLQNFVMLAQGP 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L                  +++     +   + L +RRT I  A R    +++
Sbjct: 125 RDKGFPELFIQGGIDLPGGRISAIQLFIMATSVLMMVGLHLLVRRTRIGKAMRATAQDKQ 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + SA   +AG         I+  +   +  +   +  +LGG+
Sbjct: 185 MASLVGIDVNRVISVTFLIGSALAAVAGVMVGMYYGLINFYIGYIA-GVKAFTAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L  +  L  G     +  +  F               L LV++ R   
Sbjct: 244 GSIPGAMLGGVLLGLIESLGAGYISSEYKDVFAF-------------AILILVLIFRPRG 290

Query: 339 LLR 341
           LL 
Sbjct: 291 LLG 293


>gi|317401949|gb|EFV82552.1| branched-chain amino acid transport permease [Achromobacter
           xylosoxidans C54]
          Length = 327

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 59/345 (17%), Positives = 135/345 (39%), Gaps = 23/345 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +N+      +LAVV  +L F+ +             ++I+ Y +FA   ++++G  GLLS
Sbjct: 1   MNRQFLGYAVLAVVVAILPFVGVYPIF--------AMKIMCYALFACAFNLLLGFTGLLS 52

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                     AY+       +G+   + +     ++   G+ MG  +++  G Y A+ TL
Sbjct: 53  FGHAAFLGSAAYAAGHALKVWGVPTEIGLLFGVAVAALLGLAMGALAIRRSGIYFAMITL 112

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++++     ++    T G+ G+    R                     +  ++ +YY++
Sbjct: 113 ALAQMVFFFFLQA-KFTGGEDGLQSVPRGT-------------LLGIIDLSKDLNLYYLV 158

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +G+  +   II     +      + +R+N+    SL   +   KL AF +S+A  G+AGA
Sbjct: 159 MGVFIIGYFIIWRTVHSPFGQVLQALRENEPRAISLGYDVDRFKLLAFVLSAAIAGLAGA 218

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
                    +     +  + +VI + ++GG+ +L+       I++ +            +
Sbjct: 219 TKTLVFVSATLSDATWQMSGLVILMTLIGGLGTLTGPILGAFIVVLLENKVGDFGQMMAS 278

Query: 308 -SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            + + +        T ++ +   + +L     ++          R
Sbjct: 279 LTGVDWFLRLGESVTIVIGLIFVICVLAFRRGIVGEIGALIEKRR 323


>gi|146339162|ref|YP_001204210.1| putative high-affinity branched-chain amino acid transport system
           permease livM [Bradyrhizobium sp. ORS278]
 gi|146191968|emb|CAL75973.1| putative high-affinity branched-chain amino acid transport system
           permease protein livM [Bradyrhizobium sp. ORS278]
          Length = 628

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 59/330 (17%), Positives = 124/330 (37%), Gaps = 33/330 (10%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
              L F  +    +  Y  ++G +I I+V+FA  L  ++   GL S      + +GAY  
Sbjct: 315 LVALAFAAMLPFIAGNYALTVGSEIAIFVIFAASLHFLMAVGGLASFGHAAYFGLGAYGV 374

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
             L    GL +   + +  ++  A   + G  +++  G Y A+ TL  ++I  +I  +W 
Sbjct: 375 AFLAKMAGLPMIACLLLGPLLGAAGAAVFGAFAVQLSGVYFAMLTLAFAQIVWSIAFQWV 434

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G  G                      +P  +       Y++ LG+     S++  +
Sbjct: 435 AVTGGDNG------------------ILGLWPEKWAASPSHFYWLALGVSAFVVSVLRLI 476

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +    A R +RD+     S+       + +AF ++    G+ GA FA  +  + PD  
Sbjct: 477 TFSPFGYALRGMRDSPLRSESIGINGKRIQWTAFIIAGTTAGIGGALFAYLKGSVFPDNM 536

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             S ++  + +V+LGG+ ++        +   +                           
Sbjct: 537 GISLSVDALVMVLLGGVETVPGAIFGAIVYKALNIWLVSQ---------------TDWSK 581

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            ++ I + L++++    ++ +        R
Sbjct: 582 LVLGIFIVLIVVVFPKGIVGVVESVMHRRR 611



 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 96/311 (30%), Gaps = 28/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--SRYGLSIWLLI 96
             +         + A GLSI+ G   +++      Y +GAY    L       L  W  I
Sbjct: 8   FLTGLASAASLFLVASGLSIIFGVTRIVNFAHGAFYMLGAYVAFSLTERLSGPLGFWGGI 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V+A+     G+++ +  L+       +  L+ +     ++     +  G          
Sbjct: 68  VVAALAVAVIGVLVEIVLLRRIYHAPELFQLLGTFGLTLMVEDLVVLIWGPD-------- 119

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                  R+                +  ++++    +  ++ L  +RT      R    +
Sbjct: 120 --DLVGRRAPGFKGAVDFFGQNIPSYDLFLIVLGPVVLGALWLLFQRTRWGILVRAATQD 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +    +L     +   S FAV      + GA                   + V  +V++G
Sbjct: 178 RDMVAALGVNQKWLFTSVFAVGVFLAALGGALQIPRDAV--HHAMDLRIIVEVFVVVVIG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+     A  ++  +      +              F      L+ + + +V+++R 
Sbjct: 236 GLGSILGAFVAAVLVSELNAFGILI--------------FPTISLILVFLVMAVVLVVRP 281

Query: 337 HSLLRLRTPSN 347
             L   +    
Sbjct: 282 WGLFGRKEAPA 292


>gi|228900552|ref|ZP_04064775.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis IBL 4222]
 gi|228859103|gb|EEN03540.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis IBL 4222]
          Length = 298

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 58/313 (18%), Positives = 123/313 (39%), Gaps = 31/313 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPV 98
           M  QI I+ +FA    +++G  G++S    + + IGAY   +L  R      +  + I  
Sbjct: 1   MFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFLIGIVA 60

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++S     I+GL SL+ +  + A+ TL +S++F  +  KW+ +T+G  G        F
Sbjct: 61  AIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPEIF 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                    YYV L        ++    +++I    + I  N++
Sbjct: 121 RDRF-------------------TFYYVSLVCLCFIFILLRLFTKSSIGKVLKAISQNEQ 161

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   ++  K+ A  V+     ++G  F  +   ++  +F     +  + + ++GG+
Sbjct: 162 RVEALGYKVLHYKIIASVVAGIVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGV 221

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L      + I+  +      +   Y             R T ++ +   +V+L+    
Sbjct: 222 GTLIGAIAGSGIIESLKYYLSELATEY---------PIFERWTIILGLLYIIVLLVFPKG 272

Query: 339 LLRLRTPSNFLER 351
           L+         +R
Sbjct: 273 LVGTVKKLKGFKR 285


>gi|113868983|ref|YP_727472.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113527759|emb|CAJ94104.1| ABC-type transporter, permease component: HAAT family [Ralstonia
           eutropha H16]
          Length = 311

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 96/305 (31%), Gaps = 6/305 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   IY + A G ++V G LG+++        IGA + +            L   
Sbjct: 8   IVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMIGALTALSAILGLQKFAPGLPEW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      +     L +  + +A   L  +     ++         +    +      
Sbjct: 68  LTLVIATLVAMPVCAILSYSIERIAYRPLRNAPRLAPLITAIGVSIILQTMGMLIWSRNP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L              ++          ++     + + ++  + RT +  A R   +NQK
Sbjct: 128 LTFPQLLPSEPIDIGTTGATITGKEMVIIGMAVMVMSGLLALVNRTKLGRAMRATAENQK 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +     F   + F + +    +AG   A +       M  F   +   +  +LGG+
Sbjct: 188 VAGLMGVNPNFVISATFMIGATLAALAGVMMATNYGNAHFYM-GFIPGLKAFTAAVLGGI 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  L  G      N +       +        I L  V++ R   
Sbjct: 247 GNLAGAMVGGMLLGLIEALGAGYIGDLTNGVFG-----SNYQDVFAFIVLITVLVFRPSG 301

Query: 339 LLRLR 343
           ++  R
Sbjct: 302 IMGER 306


>gi|115350134|ref|YP_771973.1| inner-membrane translocator [Burkholderia ambifaria AMMD]
 gi|115280122|gb|ABI85639.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia ambifaria AMMD]
          Length = 324

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/302 (16%), Positives = 123/302 (40%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS    +  A   Y         G +  L + V   
Sbjct: 26  FVMKVLTFALFAAAFNLLIGYTGLLSFGHAMFLATAGYGTGYTIQTLGFTPELGVLVGTF 85

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+++GL +++ +G Y A+ TL  +++   I ++                      
Sbjct: 86  AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTRGED 131

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  ++ +YYV+L +   + + I+ +  +        I++N+    
Sbjct: 132 GLQGVPRGHLFGLVDLSNDVALYYVVLAVIVAACAFIVRIVHSPFGQVLVAIKENEARAI 191

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+   G+AG+         +     ++ + +V+ + ++GGM +L
Sbjct: 192 SLGYDTDRFKLLAFILSAGLAGLAGSLKVLVLGFETLSDAHWTMSGLVVLMTLVGGMGTL 251

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +    +  +  + + + +  S     T +  +     +L     ++
Sbjct: 252 FGPLLGAALIVALEDRLGDIGEWLASVTGIGWFHSLGESTTIVTGLIFIACVLAFRRGIV 311

Query: 341 RL 342
             
Sbjct: 312 GE 313


>gi|91789640|ref|YP_550592.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91698865|gb|ABE45694.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas sp. JS666]
          Length = 309

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 100/305 (32%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G + L++        +GA +   +      ++      
Sbjct: 8   IINGLVLGSMYALIALGYTMVYGIINLINFAHGEVLMVGALTSWTIIGLMQEAMPGTPGW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++       +   +L F  + +A   L  S     ++         +    +  +  +
Sbjct: 68  LILLISLLIAFVVCGALNFAIEKVAYRPLRNSPKLAPLITAIGMSLLLQTLAMMIWKPNY 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+    F     +  +   ++L       + ++  +  T +  A R   +N +
Sbjct: 128 --KPYPTLLPTEPFQVGGAVITVTQLFILGATAVSLSVLMWLVHYTRLGRAMRATAENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + F + +    +AG  +A++   +   M  F   +   +  + GG+
Sbjct: 186 VAALMGVRPDTVISATFIIGAILAALAGVMYASNYGTVQHTM-GFLPGLKAFTAAVFGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L  +  +  G        +L      +        I L  V+ +R   
Sbjct: 245 GNLGGAVLGGILLGLIESIGAGYIGPLTGGVLG-----SQYSDIFAFIVLIFVLTLRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|194290589|ref|YP_002006496.1| high-affinity branched-chain amino acid transport protein,ABC
           superfamily, membrane component [Cupriavidus taiwanensis
           LMG 19424]
 gi|193224424|emb|CAQ70435.1| high-affinity branched-chain amino acid transport protein,ABC
           superfamily, membrane component [Cupriavidus taiwanensis
           LMG 19424]
          Length = 311

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 96/305 (31%), Gaps = 6/305 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   IY + A G ++V G LG+++        IGA + +            L   
Sbjct: 8   IVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMIGALTALSAILGLQKFAPGLPEW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      +     L +  + +A   L  +     ++         +    +      
Sbjct: 68  LTLVIATLVAMPVCAILSYSIERVAYRPLRNAPRLAPLITAIGVSIILQTAGMLIWSRNP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L              ++          ++     + + ++  + RT +  A R   +NQK
Sbjct: 128 LTFPQLLPSDPIDIGATGATITGKEMVIIGMAVMVMSGLLALVNRTKLGRAMRATAENQK 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +     F   + F + +    +AG   A +       M  F   +   +  +LGG+
Sbjct: 188 VAGLMGVNPNFVISATFMIGATLAALAGVMMATNYGNAHFYM-GFIPGLKAFTAAVLGGI 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  L  G      N +       +        I L  V++ R   
Sbjct: 247 GNLAGAMVGGMLLGLIEALGAGYIGDLTNGVFG-----SNYQDVFAFIVLITVLVFRPSG 301

Query: 339 LLRLR 343
           ++  R
Sbjct: 302 IMGER 306


>gi|33601733|ref|NP_889293.1| permease component of ABC transporter protein [Bordetella
           bronchiseptica RB50]
 gi|33576170|emb|CAE33249.1| permease component of ABC transporter protein [Bordetella
           bronchiseptica RB50]
          Length = 329

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 60/320 (18%), Positives = 125/320 (39%), Gaps = 26/320 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L    F           S+ I +LI+ ++A G +++ G +GLLS         GAY+  
Sbjct: 27  VLAAIAFFCVFPWIMPYQSVAINVLIFGLYAVGFNLLFGYMGLLSFGHAAFLGTGAYTAG 86

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           IL S++G + W  +P +  +S    + MGL +++ RG Y A+ TL +S+    ++ +   
Sbjct: 87  ILISQHGAAWWWAVPAAIAMSALVALAMGLLAIRTRGIYFAMVTLALSQCVYFLVYQLPA 146

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
                               V             ++  +  YY +LG   L+ +++  + 
Sbjct: 147 SGG-----------ENGLRGVNVAEVSLLGLRLDLLDPMQKYYFILGFVALAMAVLSRIL 195

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            +        IR+N+    +    +  +KL  F +S+AF G+AGA  A     ++ +   
Sbjct: 196 SSPFGGVVEAIRENESRARACGFDVDRSKLLTFVLSAAFCGLAGALNAIHLSSVAIETLA 255

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           ++ + +V+ + +LGGM +        A+ + + ++       +                 
Sbjct: 256 YTTSGMVVMLCLLGGMGTYFGPFVGAALFLFIQDVASEYTENW---------------QL 300

Query: 323 LMVIALFLVILMRSHSLLRL 342
            +     + +L     +   
Sbjct: 301 YVGAVFVIFVLFFPKGVWGT 320


>gi|170745119|ref|YP_001766576.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
 gi|170658720|gb|ACB27774.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
          Length = 344

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 57/323 (17%), Positives = 120/323 (37%), Gaps = 35/323 (10%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--------- 82
              +  Y+ +  +   I  + A  L++++G  G LSL  +  + IGAY            
Sbjct: 19  GLGASPYLLNALVVTGILTIGAMSLNLLLGFTGQLSLGHIAFFGIGAYVSALTSLGFDVD 78

Query: 83  ----ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               I          + + ++   +GACG ++G  S + RG Y  I T+  +E+ + + +
Sbjct: 79  LGFGIRVVHEPWPAVVGLLLATAAAGACGYLIGRLSFRVRGAYFVIVTISFAEVVRLVAL 138

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W  +T G   +     +          +         +  ++  YY++L +  L  ++I
Sbjct: 139 NWVELTQGPLALTNIPAIT---------LGLPGLGMWTLKTKLQNYYLVLAVGTLCYAVI 189

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L       A R +++N+    S+          A  +S+A  G AG+ +A     I P
Sbjct: 190 ARLVGGRFGRAMRGLKENEPLALSVGINATRTLTVAAVISAAMAGAAGSLYAHYLRIIDP 249

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           D+F F+  + ++ +V+ GG  +L        I   +                        
Sbjct: 250 DVFLFATTVSMVIMVVAGGKGTLMGPVVGGLIFGLLPVALR-------------PVMAPE 296

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
               +  + L +++ +    ++ 
Sbjct: 297 AQWIVYGLVLIVILFVMPRGIVP 319


>gi|288916402|ref|ZP_06410780.1| ABC transporter related protein [Frankia sp. EUN1f]
 gi|288352173|gb|EFC86372.1| ABC transporter related protein [Frankia sp. EUN1f]
          Length = 1033

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 53/316 (16%), Positives = 120/316 (37%), Gaps = 19/316 (6%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
               LG   +     S  I   I  +    L +V G  G +SL  +      A++   L 
Sbjct: 334 ALGVLGLLVTTGTWRSAVIGTFIAAIIGLSLVVVTGYAGQVSLAQLALAGSAAFTLSGLT 393

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
             + +       ++A+++   G+++GLP+L+ +G  L I TL ++   + +  +   I +
Sbjct: 394 QSWHVPFPFAPLLAALVATVLGVVIGLPALRLKGLTLGIVTLALAYTIEAVWFRNTDIVD 453

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                    +L+ L  ++ +   F R P            + L +    A  +  LR +A
Sbjct: 454 SDGAQVTQPKLFGLDLSIGTGHAFPRLPFG---------LLCLAVLVAVAFGVAKLRTSA 504

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           + +A   +R N+++   +   ++  K+++FA++S   G+ G+  A   + ++   F    
Sbjct: 505 LGSAMLAVRANEQSAAGIGINVVAVKVASFAIASFIAGLGGSLLAYRLNTVTFASFTALG 564

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
            + ++S   L G+TS+     A  +    +              +            +  
Sbjct: 565 GLALLSTAYLAGVTSVYGGILAGVMASTGITFI----------AMDRWVHLGDWFPVITG 614

Query: 326 IALFLVILMRSHSLLR 341
           + L + ++        
Sbjct: 615 VLLLVALIGHPEGFAS 630



 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 85/287 (29%), Gaps = 7/287 (2%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           +Y      L +   S G+++          AYSY  L     L +   +P S  I G+  
Sbjct: 16  VYAALGLALVLTYRSSGVINFATGAVALYVAYSYAYLRDGQFLVLLPGLPESVDIGGSWP 75

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG-----KAGIYVADRLYFLGTT 162
           +          G  L     +                            +A RL     +
Sbjct: 76  LAPAAALSLLLGALLGAILYLAVFRPLREAPPLARAVASLGVLVVIQSTMAIRLGTSPVS 135

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           V ++    R+           +Y+++ +  L+  +    R T      R + ++Q   + 
Sbjct: 136 VSAIFPSERWEFGDAKLLSDRFYLVVAVVALTLVLTAVYRFTRFGLLTRAVAESQTGAYV 195

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
              +     L  + +S    G AG   A                +  ++  ++GG  +L 
Sbjct: 196 SGVSPDRIALFNWMISGVTAGAAGILIAPLSPL--SPTTYTLFVVPALAAAVVGGFKNLI 253

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
               A  ++  +      +     + L K   S  +    ++V  L 
Sbjct: 254 PTVAAGIVIGMLQAEAQSLVSRDVSWLPKTGSSELIPLIVILVALLI 300


>gi|219682619|ref|YP_002469002.1| branched-chain amino acid ABC-type transport system permease
           components [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|219620269|gb|ACL28426.1| branched-chain amino acid ABC-type transport system permease
           components [Bifidobacterium animalis subsp. lactis
           AD011]
          Length = 475

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 80/302 (26%), Gaps = 24/302 (7%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           I  L+  + A G+++V G+ GL S +      +G     +      + + L    +  I 
Sbjct: 196 IFGLMLGLMAVGMNLVYGTTGLSSFSHGEQVTLGGLMAYVGTQMLHMPVVLSAIFAVAIG 255

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
              G +                   M             I    A  Y+    +      
Sbjct: 256 ALAGWVQNQLVWAPLRHKRVGVMQQM----------IVTIGLSMALQYIYQFFFGGDIKG 305

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                        ++                 S+ ++L  T +  A R + DN     + 
Sbjct: 306 IVKSVPEGIQLGPIVTNAPTLIAAAIALVTIVSVTVFLYCTRLGRATRAVSDNAALAAAS 365

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              +       + +S     ++G       + I+ +    +  +++ + V LGG+ + + 
Sbjct: 366 GINVDSVVRIVWILSCGLAALSGVLIGIHLNGIAWNT-GVTLLMLMFAAVTLGGLGTANG 424

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                 I+  V ++   +                +                R   +   +
Sbjct: 425 ALVGALIVGIVADMSTLVIPSDMRYASALAILILVLLI-------------RPQGIFGKQ 471

Query: 344 TP 345
             
Sbjct: 472 KR 473


>gi|88855356|ref|ZP_01130020.1| branched-chain amino acid ABC transporter permease protein [marine
           actinobacterium PHSC20C1]
 gi|88815263|gb|EAR25121.1| branched-chain amino acid ABC transporter permease protein [marine
           actinobacterium PHSC20C1]
          Length = 359

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 54/339 (15%), Positives = 118/339 (34%), Gaps = 14/339 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   +  +  + +   L           +    L++   A    ++ G+ G+LS    + 
Sbjct: 21  VFAAILPLLNISIPGVLPGATYTPGTLQLLALALLFASLALSYHLLFGTAGMLSFGHALY 80

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +A+GAY   I+  +  LS+   + ++  I  A   ++G  SL+  G   A+ TL  ++  
Sbjct: 81  FALGAYGLGIVLQQTELSLIPALGLTLAIVIAAAYLLGSLSLRVTGISFAMVTLAFAQAG 140

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             ++ +   IT G+ G             +R            V+    +Y++ L +  +
Sbjct: 141 NVLVRRNPAITGGEEG-------------LRLDTEHVPDFFIGVVNTRNLYWLALALLVI 187

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              ++     +   +A    R+N+     L       KL AF ++S    + G      +
Sbjct: 188 VFVVVASFEHSRAGHAVTATRENELRVRVLGLRPFGVKLMAFVIASVLASLVGMVHLLLQ 247

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
              +P        + ++ IV+LGG+ S         I   + +    +      + L   
Sbjct: 248 SGTTPRATSADFTLTILVIVVLGGVGSRWGAIVGGIIYTLLDQRLTALAGSEAIADLPAV 307

Query: 314 CSFNMRH-TTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               +     ++     LV+L     +       +   R
Sbjct: 308 LRIPLSEPLFILGTLFILVVLFLPGGIAGAARRLSTGTR 346


>gi|220914813|ref|YP_002490121.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219952564|gb|ACL62954.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 293

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 59/304 (19%), Positives = 121/304 (39%), Gaps = 26/304 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ ++ I I + +  A   ++++G  GL+S+   + YAIGAY   +L    G+ + L +
Sbjct: 2   DYLFTLAILIGLSIALASSFNLIIGYAGLISIAHPVFYAIGAYVSALLARDLGVPVPLAM 61

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A+ + A    + LPSL+  GDYL IA++         +     +T G  G+      
Sbjct: 62  LCGALAAAAASAAVALPSLRVSGDYLLIASIGFQLGVLEAIKNIA-VTGGAGGLTNIPPF 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                        ++LG   L+  +   +       A   +RD+
Sbjct: 121 LVHEAGRG-----------------AYVALVLGFAALTVWLNWTIAHGPYGRALSAMRDD 163

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + AF  L    +  K++ FA  SA  G+AGA +A     ++P+ F+  ++  ++++V++G
Sbjct: 164 ELAFAGLGRNAVSMKVAVFAFGSAVAGLAGALYAHYFRFVTPEQFEILQSAALLTMVVVG 223

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +         +L  + +    ++                    +    + + +  R 
Sbjct: 224 GIRTTWGPVLGAVLLQALPQAITFLDLP--------PALLGPLQGLMFTGLVLVFMFWRP 275

Query: 337 HSLL 340
             L+
Sbjct: 276 QGLI 279


>gi|45440785|ref|NP_992324.1| branched-chain amino acid ABC transporter permease [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51595574|ref|YP_069765.1| ABC type branched-chain amino acid transporter, permease protein
           [Yersinia pseudotuberculosis IP 32953]
 gi|108806898|ref|YP_650814.1| branched chain amino acid ABC transporter permease [Yersinia pestis
           Antiqua]
 gi|108812947|ref|YP_648714.1| branched chain amino acid ABC transporter permease [Yersinia pestis
           Nepal516]
 gi|145599775|ref|YP_001163851.1| branched chain amino acid ABC transporter permease [Yersinia pestis
           Pestoides F]
 gi|149366816|ref|ZP_01888850.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis CA88-4125]
 gi|162418934|ref|YP_001605867.1| hydrophobic amino acid ABC transporter permease [Yersinia pestis
           Angola]
 gi|165924661|ref|ZP_02220493.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938308|ref|ZP_02226866.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166009786|ref|ZP_02230684.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166211555|ref|ZP_02237590.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167400461|ref|ZP_02305974.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167419831|ref|ZP_02311584.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167424213|ref|ZP_02315966.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167466734|ref|ZP_02331438.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis FV-1]
 gi|170025095|ref|YP_001721600.1| urea ABC transporter permease UrtC [Yersinia pseudotuberculosis
           YPIII]
 gi|186894638|ref|YP_001871750.1| urea ABC transporter permease UrtC [Yersinia pseudotuberculosis
           PB1/+]
 gi|218928352|ref|YP_002346227.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis CO92]
 gi|229841133|ref|ZP_04461292.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229843237|ref|ZP_04463383.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229894145|ref|ZP_04509331.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis Pestoides A]
 gi|229903379|ref|ZP_04518492.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis Nepal516]
 gi|270487190|ref|ZP_06204264.1| urea ABC transporter, permease protein UrtC [Yersinia pestis KIM
           D27]
 gi|294503206|ref|YP_003567268.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis Z176003]
 gi|45435643|gb|AAS61201.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis biovar Microtus str. 91001]
 gi|51588856|emb|CAH20470.1| ABC type branched-chain amino acid transporter, permease protein
           [Yersinia pseudotuberculosis IP 32953]
 gi|108776595|gb|ABG19114.1| Branched-chain amino acid transport system, permease component
           [Yersinia pestis Nepal516]
 gi|108778811|gb|ABG12869.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis Antiqua]
 gi|115346963|emb|CAL19853.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis CO92]
 gi|145211471|gb|ABP40878.1| Branched-chain amino acid transport system, permease component
           [Yersinia pestis Pestoides F]
 gi|149291190|gb|EDM41265.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis CA88-4125]
 gi|162351749|gb|ABX85697.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis Angola]
 gi|165913686|gb|EDR32305.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165923721|gb|EDR40853.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991182|gb|EDR43483.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166207326|gb|EDR51806.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166962572|gb|EDR58593.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050410|gb|EDR61818.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167057062|gb|EDR66825.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169751629|gb|ACA69147.1| urea ABC transporter, permease protein UrtC [Yersinia
           pseudotuberculosis YPIII]
 gi|186697664|gb|ACC88293.1| urea ABC transporter, permease protein UrtC [Yersinia
           pseudotuberculosis PB1/+]
 gi|229679149|gb|EEO75252.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis Nepal516]
 gi|229689584|gb|EEO81645.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229697499|gb|EEO87546.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229704030|gb|EEO91043.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis Pestoides A]
 gi|262361245|gb|ACY57966.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis D106004]
 gi|262365218|gb|ACY61775.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis D182038]
 gi|270335694|gb|EFA46471.1| urea ABC transporter, permease protein UrtC [Yersinia pestis KIM
           D27]
 gi|294353665|gb|ADE64006.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis Z176003]
          Length = 358

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 60/344 (17%), Positives = 101/344 (29%), Gaps = 27/344 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  L V+  L L           Y  ++  +IL Y + A  L +V G  GLLSL   + +
Sbjct: 25  LIALIVLPFLALLPADHPLAISTYTLTLIGKILCYAVVAIALDLVWGYAGLLSLGHGLFF 84

Query: 75  AIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           A+G Y+  +                   W  +P     S      + L  L         
Sbjct: 85  ALGGYAMGMYLMRQAAGDGLPAFMSFLSWSELPWFWSGSQYFVWALCLIVLVPGLLAFLF 144

Query: 125 ATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                    +     ++       G    +  +  +              FP S     I
Sbjct: 145 GYFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTMLGFPVSATSTRI 204

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            ++   L +   S ++ L L RT        +RD +             KL  + +S+  
Sbjct: 205 ALFLATLALLIASLALGLALARTKFGRVLTAVRDAENRLMFCGYDPKGFKLFVWTLSAVL 264

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
             +AGA +      I+P     + +I     V LGG  +L        I+ G        
Sbjct: 265 CALAGALYVPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGIVNGAKSW---- 320

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                     F  +        + +   LV L     ++ L   
Sbjct: 321 ----------FTMAMPEYWQFFLGLIFILVTLFLPKGVIGLLRR 354


>gi|154248072|ref|YP_001419030.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154162157|gb|ABS69373.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 375

 Score = 88.4 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 106/360 (29%), Gaps = 39/360 (10%)

Query: 8   LNKYDKILCLLAVVYPLLL------FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           +++   I  L+ +   +L+                 Y+  +  + L Y + A  + +V G
Sbjct: 7   IDRTGGIFLLVMLAVAVLVPASNLLLPAGHPLHVPDYMIPLLGKYLTYALLAVAVDLVWG 66

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G+LSL     +A+G Y+  +   R      +                 LP      D 
Sbjct: 67  YCGVLSLGHGAFFALGGYAMGMYLMRQIGPRGVYGNPVLPDFMVFLNYKELPWFWHGFDM 126

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162
              A L++  +   +   +                             +  D  +     
Sbjct: 127 FPFAMLMVVLVPGALAFVFGWFAFRSRVTGVYLSIITQAMTFALMLAFFRNDMGFGGNNG 186

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +        FP S     + ++            I   L  +        +RD +     
Sbjct: 187 LTDFKDILGFPISAPSTRLTLFVASAVALAAGYLICRALVTSKYGKVLVAVRDAESRTRF 246

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   +   KL A+ +S+   G+AGA +      I+P  F  +++I ++  V +GG  +L 
Sbjct: 247 LGYRVQNYKLLAWVLSAMLAGVAGALYVPQVGIINPSEFAPAQSIEMVIWVAVGGRGTLV 306

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             A    I+        G+                      +     LV L     +L L
Sbjct: 307 GAALGAVIVNAGKTWFTGV--------------LPEAWLFALGALFVLVTLFLPRGVLGL 352


>gi|228476571|ref|ZP_04061253.1| branched-chain amino acid ABC transporter permease protein
           [Streptococcus salivarius SK126]
 gi|228251766|gb|EEK10831.1| branched-chain amino acid ABC transporter permease protein
           [Streptococcus salivarius SK126]
          Length = 294

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 106/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   IY + A G ++V G + L++      Y +GA+      +  G++ W+ +  
Sbjct: 10  LVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYMMGAFVGYYAINSLGMNFWVALVF 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G+++   + +   +   I+ LI +      L     +  G            
Sbjct: 70  AMLVCAILGVVIEFLAYRPLRNSTRISALITAIGVSFFLEYIMVLFVGADTRS------- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    +    +        +L+    L  ++ L +++T +  A R +  +  
Sbjct: 123 ----FPQKIAIKTYHLGSISVTNVQLLILVVALVLMVALQLIVKKTKMGKAMRAVSVDSD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S+  G AG       + I P M   +  I      +LGG+
Sbjct: 179 AAELMGINVNNTISFTFALGSSLAGAAGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +  L   +               +     ++   L +++L+R   
Sbjct: 238 GIIPGAALGGFVIGILETLSTAIG-------------LSSYRDAIVYGVLIVILLVRPAG 284

Query: 339 LLR 341
           +L 
Sbjct: 285 ILG 287


>gi|330875491|gb|EGH09640.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 355

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 70/346 (20%), Positives = 139/346 (40%), Gaps = 22/346 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            +F LR ++      +      +  F+ +    +  +  ++ I  L+  +   GL+++ G
Sbjct: 18  RLFRLRQDR------IALWGLLVFAFVGVPLLGNDYWFSAILIPFLVLSLAGLGLNLLTG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
             G LSL      A+GA++   +     G+ + L   +  ++S A  ++ GLPSL+ +G 
Sbjct: 72  YAGQLSLGSAAFMAVGAFAAYNLQLRVPGMPLLLGFALGGLVSAAVALLFGLPSLRIKGF 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YL ++TL    + + +L ++   TN  A   +                            
Sbjct: 132 YLLVSTLAAQFVVEWVLTRFSWFTNDNASGVITSPPLI-------------IAGVSFSSP 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
              Y + L +  L   +   L R  +   W  +RD   A   +   +  AKL AFA+S  
Sbjct: 179 QGRYLLTLALVVLLFWLARNLLRGELGRNWMAVRDMDTAAAVIGIRLFKAKLLAFAISGF 238

Query: 241 FIGMAGAFFA-ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           ++G+AG+ +A A    + P  F  + +  ++ I+I+GG+ S+       A ++    L  
Sbjct: 239 YLGIAGSLWAFAYLGTVEPHGFDLNRSFQILFIIIIGGLGSVQGNFFGAAFIVLFPILLG 298

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
            ++      L+      N++   L    +   ++     L RL   
Sbjct: 299 NLSALLPVGLIDSGQLENIQKM-LFGALIIAFLIKEPEGLTRLWQR 343


>gi|148979617|ref|ZP_01815622.1| branched-chain amino acid ABC transporter, permease protein
           [Vibrionales bacterium SWAT-3]
 gi|145961702|gb|EDK26999.1| branched-chain amino acid ABC transporter, permease protein
           [Vibrionales bacterium SWAT-3]
          Length = 390

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/349 (14%), Positives = 99/349 (28%), Gaps = 33/349 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +  ++ +     +         + +  S+  + L Y M A  L +V G LG+LSL   
Sbjct: 23  AILAAVILIPLANTMLPSGHPLHVETFTISLMGKYLSYAMLALALDLVWGYLGILSLGHG 82

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +A+G Y+  +   R      +                 LP      D    A L++  
Sbjct: 83  AFFALGGYAMGMYLMRQIGDRGVYGDPILPDFMVFLDWSALPWFWQGFDQFWFACLMVVL 142

Query: 132 IFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRF 172
           +   +   +  +                          +  +  +     +         
Sbjct: 143 VPGALAYLFGYLAFRSRVSGVYLSIMTQALTYALMLAFFRNEMGFGGNNGLTDFKDIIGL 202

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
                  +I ++        LS  +   +  + +      IRD +     +   +   KL
Sbjct: 203 SLQSDAVKIGLFVATGISLILSYIVCRMVVTSRLGRVALAIRDTESRTRFMGYDVDGIKL 262

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             F +S+   G+AGA +      I+P  F    +I ++  V LGG  +L        I+ 
Sbjct: 263 WVFVLSAVIAGIAGALYVPQVGIINPGEFAPLNSIEIVVWVALGGRATLFGAIVGALIIN 322

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                              F   F       +     L  +     ++ 
Sbjct: 323 YAKSW--------------FTVEFPEVWLFALGGLFVLSTMYFPQGVIG 357


>gi|113867097|ref|YP_725586.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113525873|emb|CAJ92218.1| ABC-type transporter, permease component: HAAT family [Ralstonia
           eutropha H16]
          Length = 401

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/344 (14%), Positives = 96/344 (27%), Gaps = 32/344 (9%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L+           Y  ++  +I+ + + A  L +V G  G+LSL   + +A+G Y+  + 
Sbjct: 48  LVLPEGHPLHLSAYALTLVGKIMCFALAAIALDLVWGYCGILSLGHGLFFALGGYAMGMY 107

Query: 85  GSRYG----------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
             R                + +    +     G      +L        +   +      
Sbjct: 108 LMRSIGREGVYKSELPDFMVFLDWKELPWFWHGTEHLGYALLLVVLVPGVLAWLFGFFAF 167

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTT--------VRSLIRFFRFPSSFVIYEIFMYYV 186
              IK   ++     +  A  L F                 R   F  +       ++ +
Sbjct: 168 RSRIKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRIAGFAIAAPQTRTALFVL 227

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
                        ++  + +      +RD +          +  KL  +  S+   G+AG
Sbjct: 228 TFLALLAGFIACRYIVTSKLGRVVTAVRDAEMRVMFSGYNPLGYKLFVWTFSAVLCGIAG 287

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A +      I+P       +I +   V +GG  +L        ++ G   L         
Sbjct: 288 ALYVPQVGIINPGEMSPGNSIEMAVWVAVGGRGTLIGPVIGAFLVNGAKTL--------- 338

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                F   F      L+     LV L     +  L        
Sbjct: 339 -----FTAHFAEYWLFLLGAMFVLVTLYLPDGVTGLWNRLRERR 377


>gi|94309899|ref|YP_583109.1| inner-membrane translocator [Cupriavidus metallidurans CH34]
 gi|93353751|gb|ABF07840.1| Putative branched-chain amino acid ABC transporter, permease
           protein [Cupriavidus metallidurans CH34]
          Length = 400

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/369 (12%), Positives = 104/369 (28%), Gaps = 35/369 (9%)

Query: 3   IFSLRLNKYDKILCLLAVVYPLLLFLFLG---ATKSQKYIDSMGIQILIYVMFAWGLSIV 59
           +FS R+     +L ++  +   +  L +    A     Y  ++  +I+ + + A  L +V
Sbjct: 22  LFSTRMWMAMAVLTVVVAIGVPVCALVVPEGHALHLSAYALTLIGKIMCFALAAIALDLV 81

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAM 101
            G  G+LSL   + +A+G Y+  +                                    
Sbjct: 82  WGYCGILSLGHGLFFALGGYAMGMYLMRSIGRDGVYKSDLPDFMVFLDWKELPWFWHGTE 141

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
                 +++ L        +   A     +     +I            +  +  +    
Sbjct: 142 HFPYALLLVVLVPGVLAWLFGFFAFRSRIKGVYLSIITQAMTYAAMLLFFRNETGFGGNN 201

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                 R   F  +       ++ +             ++  + +      +RD +    
Sbjct: 202 GFTDFKRIAGFAVAAPQTRAALFVLTFLALLAGFVACRYIVTSKLGRVVTAVRDAEMRVM 261

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
                 +  KL  +  S+   G+AGA +      I+P     + +I +   V +GG  +L
Sbjct: 262 FSGYNPLGYKLFVWTFSAVLCGIAGALYVPQVGIINPSEMSPANSIEMAVWVAVGGRGTL 321

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   ++ G   +                  F      L+     LV L     ++ 
Sbjct: 322 IGPVVGAFLVNGAKTMFTAY--------------FAEYWLFLLGAMFVLVTLYLPDGVVG 367

Query: 342 LRTPSNFLE 350
           L        
Sbjct: 368 LWRRLRDRR 376


>gi|323483240|ref|ZP_08088631.1| hypothetical protein HMPREF9474_00380 [Clostridium symbiosum
           WAL-14163]
 gi|323403513|gb|EGA95820.1| hypothetical protein HMPREF9474_00380 [Clostridium symbiosum
           WAL-14163]
          Length = 296

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 62/305 (20%), Positives = 125/305 (40%), Gaps = 33/305 (10%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            YI ++ + I I+ + A  L+I+ G  G  ++     + IGAY+  ++ +      WL +
Sbjct: 2   SYIITVAVNIAIFTLLALSLNIITGYAGQSAMGHAAFFGIGAYTAALMTNAGIS-FWLSL 60

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P + +++ A G ++G+ SL+ R D+LAI T+ ++ +   +      I     G+ V    
Sbjct: 61  PAAMLVTAAAGGLLGVISLRVRDDFLAITTIGINFVMVALFQNM-KIFGASLGMSVTPPT 119

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           +F                           +LL +  L+  +   + ++    A  ++R++
Sbjct: 120 FFGAKMTPMH----------------FLVLLLILIVLTCLLTRKMTKSWFGLALASLRND 163

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  S    +   K+ AF + +A  G+ GA +      I    F F+ +I ++S+V++G
Sbjct: 164 EGAAMSFGINVSQYKILAFILGTAIAGLTGAIYVHRMTFIFSSSFAFTVSISILSMVVVG 223

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++        IL    E+      Y                  L    L L++  + 
Sbjct: 224 GIGTIRGPLLGALILGAAPEVLRFAADY---------------RMILYGGILVLMMRFQP 268

Query: 337 HSLLR 341
             LL 
Sbjct: 269 QGLLG 273


>gi|312139407|ref|YP_004006743.1| ABC transporter transmembrane protein [Rhodococcus equi 103S]
 gi|311888746|emb|CBH48058.1| putative ABC transporter integral membrane subunit [Rhodococcus
           equi 103S]
          Length = 631

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 95/298 (31%), Gaps = 28/298 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
           G   +   + ++G+Q  +  + A+G++ V+   G + L+      +         +  G+
Sbjct: 26  GDFLTTNNLLNVGVQASVTAVLAFGMTFVI-VSGGIDLSVGSIAGLSGIVTGWTATTAGV 84

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +WL +          G++ G+     R      ATL M  + + + +            
Sbjct: 85  PMWLAVLAGMASGVLAGVVSGILITAGRMPPFI-ATLAMLSVARGLALVIADGR------ 137

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                           +  +           F+ Y +L +   + +  L LRRT    A 
Sbjct: 138 -------------PIPVDGWLATLGSGELFGFLPYPVLVLIAAAIATGLILRRTYAGRAM 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N +A       +   ++  +A+S  F  +AG   AA      P+       +  I
Sbjct: 185 YAIGGNAEAARLSGIRVNRQQVLVYALSGLFAAVAGILLAARLASAQPEA-GTGYELDAI 243

Query: 271 SIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + V++      GG+ +         IL  +      ++   F   +            
Sbjct: 244 AAVVIGGASLSGGVGTAVGTLIGALILAILRNGLNLLDVSAFWQQVVIGAVIAAAVLF 301


>gi|300310287|ref|YP_003774379.1| branched-chain amino acid ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300073072|gb|ADJ62471.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 347

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 67/320 (20%), Positives = 130/320 (40%), Gaps = 16/320 (5%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGS 86
           + +    S   ID++ I  L   + A GL+++ G  G LSL      A+GA++   +   
Sbjct: 34  VVVPWIASAYLIDALLIPFLALSLAAVGLNLLTGYAGQLSLGSAAFMAVGAFAAYNLNLR 93

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL + + I ++ + + A G++ GLPSL+ RG YLA++TL      Q +L+K+   +N 
Sbjct: 94  VAGLPLLVSIVLAGLAATAIGLVFGLPSLRLRGFYLAVSTLAAQFFVQWVLVKFSWFSND 153

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                +                               Y   L +  +   +   L ++  
Sbjct: 154 NPSGVIDAPPLV-------------VGGLAFDTPAGRYLFALAIVTVLTLLCWRLVQSQT 200

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRISPDMFKFSE 265
            + +  +RDN++A   +   ++  KL AFA+SS  IG+AG  +       + P  F    
Sbjct: 201 GHHFIAVRDNEQAARVIGVPVLRTKLLAFAISSFVIGVAGVLWGFVYLRTVEPAGFNLDR 260

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           ++ ++ IVI+GG+ ++       A+++    L   +                M    ++ 
Sbjct: 261 SLQILFIVIIGGLATIRGAFFGAALIVVFPLLLSRLGSLLLGQWFDSGV-LEMSQRIVLG 319

Query: 326 IALFLVILMRSHSLLRLRTP 345
             +   +++    L  L   
Sbjct: 320 ALIIFFLIVEPQGLAALWQR 339


>gi|323525067|ref|YP_004227220.1| urea ABC transporter permease UrtC [Burkholderia sp. CCGE1001]
 gi|323382069|gb|ADX54160.1| urea ABC transporter, permease protein UrtC [Burkholderia sp.
           CCGE1001]
          Length = 397

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/349 (13%), Positives = 100/349 (28%), Gaps = 32/349 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +   L V +  L+           Y  ++  + + Y + A  L +V G  G+LSL   
Sbjct: 52  LIVAFGLGVPFATLVVPQTSPLHLSAYATTITGKFMCYAIAALALDLVWGYCGILSLGHA 111

Query: 72  IAYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLP 113
           + +A+G Y+  +                                      G   +++ L 
Sbjct: 112 LFFALGGYAIGMYLMRSIGHDGKYGSDLPDFMVFLDWHQLPWYWEGTQHLGYALLLVVLV 171

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
                  +         +     +I            Y  +  +          R   FP
Sbjct: 172 PAVIAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIGGFP 231

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
            +       +  +   +  ++      +  + +      +RD +     L  + +  KL 
Sbjct: 232 ITHPGTRTALLLITFAVLIVAFIGARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLF 291

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            + VS+   G+AGA +      I+P       +I +   V +GG  +L         + G
Sbjct: 292 VWTVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNG 351

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                             F  +F       + +   LV L   + ++ L
Sbjct: 352 AKSF--------------FTANFPEYWLFFLGLIFVLVPLFLPNGIMGL 386


>gi|89098007|ref|ZP_01170893.1| Branched-chain amino acid transport system permease protein livM
           [Bacillus sp. NRRL B-14911]
 gi|89087170|gb|EAR66285.1| Branched-chain amino acid transport system permease protein livM
           [Bacillus sp. NRRL B-14911]
          Length = 332

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 125/324 (38%), Gaps = 31/324 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
           +     + L      + +  +  QI I+ +FA    I++G  G++S    + + IGAY+ 
Sbjct: 15  FIAAALMLLPFVYESRTMLILFTQIFIFAIFAMSYDILLGYTGIVSFGHAMFFGIGAYTA 74

Query: 82  VILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
            ++  R     +++ L + ++ +++      +GL +L+ +  + A+ TL  + +F  +  
Sbjct: 75  GVMMKRMEPTMVNLLLAVLLTIVLTAVLSYAVGLLTLRLKSHFYAMLTLAFAGLFLVLAE 134

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           KW+ +T G  G                           +      Y++ L    L   I+
Sbjct: 135 KWRTVTYGNDGFTFRVP-------------------DLLKDRTDFYFICLAAMILVFMIL 175

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
                + +    + IR+N++   SL   +I  K++A   +    G+AG  ++ S   ++ 
Sbjct: 176 SRFTHSPLGRVLQAIRENEQRTESLGYNVIQYKIAASVAAGVIAGIAGMLYSISLRFVNT 235

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            +F     +  + + I+GG+ +L+           ++        ++  + L        
Sbjct: 236 SVFTMDITLDALLMTIIGGVGTLA---------GAIIGAGIIEFAHHGLTELAKVHWIFE 286

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
           R      I   L ++     +L  
Sbjct: 287 RWIIFFGIIYILAVMFFPKGILGT 310


>gi|323527858|ref|YP_004230011.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
 gi|323384860|gb|ADX56951.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
          Length = 323

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/302 (15%), Positives = 125/302 (41%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             ++++ + +FA   ++++G  GLLS    +  A   Y         G S  L +     
Sbjct: 26  FVMKVMCFALFAAAFNLLIGYTGLLSFGHAMFLASAGYITGYAMQTLGFSPELGVLAGTA 85

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+++G+ +++ +G Y A+ TL ++++   + ++                      
Sbjct: 86  CATLLGLVVGIFAIRRQGIYFAMVTLALAQMVYFVFLQA--------------PFTHGED 131

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  ++ +Y+V+L +  L+  +I+ +  +        I++N+    
Sbjct: 132 GLQGVPRGKLFGLLDLTSDVALYFVVLTIMVLAFLLIVRIVHSPFGQVLVAIKENEPRAV 191

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+   G+AG+     +   +     ++ + +V+ + ++GGM +L
Sbjct: 192 SLGYDTDRFKLLAFILSAGLAGLAGSLKVVVQGFETLSDAYWTMSGLVVLMTLVGGMGTL 251

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +    +     + + +++  S     T +  I     +L     ++
Sbjct: 252 FGPLLGAALIVALEDRLGDIGGALASTTGVEWFRSLGESVTIVTGIIFIACVLAFRRGIV 311

Query: 341 RL 342
             
Sbjct: 312 GE 313


>gi|209517252|ref|ZP_03266096.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209502261|gb|EEA02273.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 316

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 99/310 (31%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-----W 93
           + +  +   +Y + A G ++V G LG+++        +GA   +                
Sbjct: 8   VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAIGVLQNHFPGLGNI 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + ++  ++      +G    +     L  A  +   I    +                
Sbjct: 68  PTLCIALAVAACACAAVGYTIERVAYRPLRRAPKLAPLITAIGVSILLQTLAMMIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      ++  +  +    +++    +   ++L + +T +  A R I
Sbjct: 128 MSFPQLLPTDPINVIAATKTTAGAVISMTEIVIIVVAFIVMGGLLLLVHKTRLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      +     F   + F + SA   +AG   A+        M  F   +   +  
Sbjct: 188 AENPANASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G      N +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGKITNDVFG-----SNYQDVFAFIVLIIVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|260222130|emb|CBA31389.1| hypothetical protein Csp_F37280 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 358

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 74/330 (22%), Positives = 131/330 (39%), Gaps = 17/330 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +      L+ F  +    S     ++ I  LI+ + A G++I+VG  G +SL      A+
Sbjct: 27  MAIAALLLVGFALVPMLASDYLFRAILIPFLIFSLAAVGVNILVGFCGQISLGSGAFMAV 86

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGA-CGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GAY+      R      L+  +   +S    GM+ GLPSL+ +G YLA+ATL        
Sbjct: 87  GAYAAYNFFVRIEGMPLLVALLLGGVSSMLFGMVFGLPSLRVKGLYLAVATLAAQFFADW 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + ++ +  TN                +    +   +     +   +  Y   L +  + A
Sbjct: 147 MFLRIQWFTN-------------NSPSGSVSVSNLQVFGLSLESPLAKYIFCLSLLVVIA 193

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRD 254
            +   L R A+   W  IRD   A   +    ++AKLSAFAVSS  +G+AGA +      
Sbjct: 194 LLAKNLVRGAVGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSFIVGVAGALWGFIYLG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY--FNSLLKF 312
              P  F   ++  ++ +VI+GGM S+       A ++ +                    
Sbjct: 254 AWEPAAFSVDQSFRLLFMVIIGGMGSIMGSFFGAAFIVVLPIFLSQFLPALAGLFGFEIS 313

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             + +     +    +   +++  H L +L
Sbjct: 314 TAAVSHAELMVFGGLIVWFLIVEPHGLAKL 343


>gi|190891910|ref|YP_001978452.1| branched-chain amino acid ABC transporter permease [Rhizobium etli
           CIAT 652]
 gi|190697189|gb|ACE91274.1| putative branched-chain amino acid ABC transporter, permease
           protein [Rhizobium etli CIAT 652]
          Length = 580

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 56/329 (17%), Positives = 109/329 (33%), Gaps = 34/329 (10%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           LL     + +   L       Y  S    I  +++ A    I+ G  G  S      + I
Sbjct: 4   LLITAPVVAILASLPYLGMADYYLSYLYIIFFWIVLATSWGILSGYTGYWSFGHAAFFGI 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK---FRGDYLAIATLIMSEIF 133
           G Y+   L ++        IP +A+++    +++GL   +    RG++ A+ TL ++ + 
Sbjct: 64  GVYTTATLTTQLSWPFVATIPAAALLAAVVAVLIGLVVFRSGALRGEFFALLTLSVTFVV 123

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             I+      +                      +     P         +Y        +
Sbjct: 124 AAIVSNTALDSG-----------------TGVFLSGIEIPMIGATASGSLYMFGFIAALV 166

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           + +   ++  +        I D++             KL +FAVSSA  G  GA  A   
Sbjct: 167 ALATSYFIFHSKFGQGLLAIHDDEDVAEVKGVPTFRYKLISFAVSSALAGAMGAIHAVYV 226

Query: 254 DRISP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
             ++  + F  +  + V+ + ILGG    +  A    I+  +           F      
Sbjct: 227 GYVTVGETFAVTVPLYVVLMSILGGARHWAGPAIGAVIITVMQSAIVSGAHAEFGRAG-- 284

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                      + +AL +VIL+    ++ 
Sbjct: 285 -----------VALALIVVILVLPSGIVP 302


>gi|291547115|emb|CBL20223.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           (TC 3.A.1.4.-) [Ruminococcus sp. SR1/5]
          Length = 294

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 100/306 (32%), Gaps = 24/306 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+        IY + A G ++V G   +L+        +GAY  +   +R G+S  L +
Sbjct: 5   SYLKDGISLGSIYAIIALGYTMVYGIAKMLNFAHGDVIMVGAYIILTCITRGGMSPILAV 64

Query: 97  PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
            +S +I    G+++   +    R     +A LI +     +L     +  G         
Sbjct: 65  ILSVVICTLLGVVIEKVAYSPLRKASSNLAVLITAIGVSYLLQNLALLIFGADAKSFVAV 124

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           +     T+             +  +      +L    +   + L++++T    A + + +
Sbjct: 125 IKVPSITLFD---------GELTIKGITIVTILACIIIMVGLSLFVKKTKPGRAMQAVSE 175

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A   +   +       FA+ S    +AG     +   ++P        I      + 
Sbjct: 176 DRDAAQLMGVNVNATISLTFAIGSGLAAIAGLLLCQTYPTLTPYT-GAMPGIKAFVAAVF 234

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S+        +L  +                            ++   L +V+L++
Sbjct: 235 GGIGSIPGAMVGGILLGIIEIFGKAYISSQVADA-------------IVFAVLIVVLLVK 281

Query: 336 SHSLLR 341
              L  
Sbjct: 282 PTGLFG 287


>gi|84501887|ref|ZP_01000045.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein, putative [Oceanicola batsensis HTCC2597]
 gi|84389882|gb|EAQ02516.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein, putative [Oceanicola batsensis HTCC2597]
          Length = 320

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 59/317 (18%), Positives = 124/317 (39%), Gaps = 15/317 (4%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           +  +          I ++   +LI  + A GL I  G  G ++L       +GAY+  IL
Sbjct: 1   MALMLAAPYLVSGRIIAILNMMLISAVIAVGLQICTGYAGQINLGQAAFMGVGAYTASIL 60

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            S+ GL+  L IP++ + +   G + GL + + +G YLA+ T+    IF   ++      
Sbjct: 61  ASKTGLTFLLTIPLAGISAALFGFLFGLTAARIKGFYLALTTIAAQFIFHFAVLNLPSSW 120

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G +          LG                       +Y+ L +  +  +    + R+
Sbjct: 121 MGGSNGITVPPAELLGLRFVGET--------------SQFYLNLAVAAIMIAGAFGIVRS 166

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
               A+  +RD+  A   +   +   K +AF + + + G+ GA +A     +  D F   
Sbjct: 167 RFGRAFVAVRDDDVAAGIMGINVAATKANAFLIGAFYAGVGGALWAYLIRFVGVDQFTLF 226

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT-TL 323
            +I  ++++I+GGM S+        ++  + E+   +      S+              +
Sbjct: 227 HSIFFVAMIIVGGMGSIVGALVGVFVIRIIQEIIATVGPNIAESVSFLGGDIVFAGMNVV 286

Query: 324 MVIALFLVILMRSHSLL 340
           +   + + +++    L+
Sbjct: 287 LGGVIAMFMILEPKGLM 303


>gi|171315844|ref|ZP_02905075.1| inner-membrane translocator [Burkholderia ambifaria MEX-5]
 gi|171099033|gb|EDT43818.1| inner-membrane translocator [Burkholderia ambifaria MEX-5]
          Length = 324

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/302 (16%), Positives = 122/302 (40%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS    +  A   Y         G +  L + V   
Sbjct: 26  FVMKVLTFALFAAAFNLLIGYTGLLSFGHAMFLASAGYGTGYAIQTLGFTPELGVLVGTF 85

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+++GL +++ +G Y A+ TL  +++   I ++                      
Sbjct: 86  AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 131

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  ++ +YYV+L +   + + I+ +  +        I++N+    
Sbjct: 132 GLQGVPRGHLFGLVDLSNDVALYYVVLAVIVAACAFIVRIVHSPFGQVLVAIKENEARAI 191

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+   G+AG+         +     ++ + +V+ + ++GGM +L
Sbjct: 192 SLGYDTDRFKLLAFILSAGLAGLAGSLKVLVLGFETLSDAHWTMSGLVVLMTLVGGMGTL 251

Query: 282 SKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +    +  +    + + +  S     T +  +     +L     ++
Sbjct: 252 FGPLLGAALIVALEDRLGDIGEWLASATGIGWFHSLGESTTIVTGLIFIACVLAFRRGIV 311

Query: 341 RL 342
             
Sbjct: 312 GE 313


>gi|160900786|ref|YP_001566368.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160366370|gb|ABX37983.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 309

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 99/305 (32%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A G ++V G + L++        +GA +          ++      
Sbjct: 8   VINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMVGALTSWSCIGLMQEAMPGAPGW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++       +   +L F  + +A   L  S     ++         +    +  +  +
Sbjct: 68  LILLLATVIACVVAAALNFVIEKVAYRRLRSSPRLAPLITAIGVSLLLQTLAMIIWKPNY 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+    F     +       VL+      AS+   +  T +  A R   +N +
Sbjct: 128 --KAYPTLLPSTPFEIGTAVITPTQILVLVVTAIALASLTYLVNYTKLGRAMRATAENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + F + +    +AG  +A++       M  F   +   +  + GG+
Sbjct: 186 VAALMGVKPDVVISATFIIGAVLAAIAGIMYASNYGTAHHTM-GFLPGLKAFTAAVFGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  +  G        +L      +        I L +++ +R   
Sbjct: 245 GNLAGAVVGAMLLGLIESIGSGYIGDLTGGVLG-----SHYTDIFAFIVLIIILTLRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|291521816|emb|CBK80109.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           (TC 3.A.1.4.-) [Coprococcus catus GD/7]
          Length = 291

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 103/305 (33%), Gaps = 25/305 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      +Y + A G ++V G   +L+        +G+Y   I  S  GL+  L +
Sbjct: 5   SYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDIIMVGSYVVYIAVSSLGLNPILSV 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +SA+     G+++   + K       +A LI +      L     +  G          
Sbjct: 65  VISAIACLVLGVVIEKVAYKPLRHASKLAVLITAIGVSYFLQNVALLIFGANTKS----- 119

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   S++         +         +L    +   + L++ +T   +A + + ++
Sbjct: 120 ------FTSVVPAVSVKLGGITITAETIVTILACVIIMICLTLFINKTKAGHAMQAVSED 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           Q A   +   +       FA+ SA   +AG    ++   ++P        I      + G
Sbjct: 174 QDAAQLMGINVNATISLTFAIGSALAAVAGVLLCSAYPSLTPYT-GAMPGIKAFVAAVFG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        +L  +  L         +  + F               L +V++++ 
Sbjct: 233 GIGSIPGALIGGILLGVIEILSKAYISSQLSDAIVFG-------------VLIVVLVVKP 279

Query: 337 HSLLR 341
             +L 
Sbjct: 280 TGILG 284


>gi|226312175|ref|YP_002772069.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599]
 gi|226095123|dbj|BAH43565.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599]
          Length = 332

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 56/336 (16%), Positives = 125/336 (37%), Gaps = 31/336 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +++  L    L      + +  +  QI I+ +FA    +++G  G++S    + + IGA
Sbjct: 11  FILFVFLSLAVLPFLSDSRSLYILFTQIFIFAIFAMSFDLLLGYTGIVSFGHCMFFGIGA 70

Query: 79  YSYVILGSRYGL---SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           YS  +    +        L + V+ M+SG    ++G+ SL+ +  + A+ TL +S++   
Sbjct: 71  YSVSLFLKNFDASIGYFLLGVLVAIMLSGILSYVIGMLSLRLKSHFYAMLTLAISQLLFV 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +  KW+ +T G  G        F                      +  YYV L +  +  
Sbjct: 131 LAEKWRSLTMGGDGFTFPVPELFRDR-------------------LSFYYVCLLLMVMLF 171

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I+    R+ +    + I  N++   +L   I+  K+    V+     ++G  +A     
Sbjct: 172 VILRAFTRSPLGKVLKAIGQNEQRAEALGYQILHYKVIVSIVAGVVAAISGGLYAVMLRF 231

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++  +F     +  + + ++GG+ +L      + I+         +   +          
Sbjct: 232 VNTQVFSIETTLDALLMSMIGGLGTLFGSILGSGIVELAHHGLTELAKLH---------P 282

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
              R    + +   LV+L     ++          +
Sbjct: 283 IFERWVIFLGLLYILVVLCFPSGIVGSFQEWREKRK 318


>gi|56478452|ref|YP_160041.1| putative ABC-transporter [Aromatoleum aromaticum EbN1]
 gi|56314495|emb|CAI09140.1| putative ABC-transporter [Aromatoleum aromaticum EbN1]
          Length = 324

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 62/323 (19%), Positives = 128/323 (39%), Gaps = 24/323 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            +   LL L +       Y   +  +I+I  +FA  L ++VG  GL+S      + I AY
Sbjct: 11  ALLATLLVLSIFPLFGSDYYSELLTKIMIMAIFAMSLDLLVGFTGLVSFGHAAFFGIAAY 70

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           + V++  +Y  +  LL+  +A+++ A    +    +        I   +        +  
Sbjct: 71  AVVLVSPQYDPASLLLVLPAAVLAAAVAAFVIGLFVLRTKGIYFIMVTLAFAQMIYFVFH 130

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
             P+  G  G++            +  +R        +      YY+ L +   +   + 
Sbjct: 131 DSPLGGGSDGVF---------INFKPELRIGETQLLDLGNAAHFYYLALLLLVATYVFLR 181

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L R+ + +A   I+ N+    SL   +   KL+ F ++ A  G+AG   A     ++P+
Sbjct: 182 ILLRSPLGHALAGIKSNEHRMLSLGFPVFLYKLAGFVIAGALAGVAGFLSACQYGFVTPE 241

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  + ++  V+ +VILGG+ +L+  A      + + E+   +  ++              
Sbjct: 242 ILSWHQSGNVLLMVILGGIGTLNGAAIGAFAFVVLQEVFSALTKHW-------------- 287

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
              LM   + LV+++    L  L
Sbjct: 288 -QFLMGTVIVLVVMLLPGGLSSL 309


>gi|311107608|ref|YP_003980461.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310762297|gb|ADP17746.1| inner-membrane translocator 45 [Achromobacter xylosoxidans A8]
          Length = 329

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 60/302 (19%), Positives = 118/302 (39%), Gaps = 24/302 (7%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           S+  ++LIY +   G ++++G  GLLS    I + +G+Y+  IL +R GL + L +  + 
Sbjct: 28  SLATEVLIYSLAVLGCNLLLGFTGLLSFGQGIFFGLGSYAVGILLTRTGLPMPLALLAAM 87

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           ++      ++G  +++ RG Y  + TL  +++F  +      +T G  G+    R  F  
Sbjct: 88  VVGALGATLVGWFAIRQRGTYFVMLTLAFAQMFYFLAYSLPDLTGGDNGLLDVPRPAFSV 147

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                           +      Y  +     +   ++L +  +        IRDN+   
Sbjct: 148 A---------GMELMPLATPWQFYAFVAVCFLVVFWLLLRVTNSVFGRTLLAIRDNEARA 198

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++   +   KLSAFA+S A   +AGAF A           ++  + +++ + ++GG  +
Sbjct: 199 MAVGYNVRLFKLSAFAISGAVTALAGAFLAMMTGIAPLSSIEYHSSEMILVMTVIGGTGN 258

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L       A  +   +    +   +                 L+   L  V L     L 
Sbjct: 259 LFASVLGAAFYVLFADWLSTLWPRW---------------LMLLGFLLIAVSLFMQKGLW 303

Query: 341 RL 342
            L
Sbjct: 304 GL 305


>gi|183602256|ref|ZP_02963623.1| branched-chain amino acid ABC-type transport system permease
           components [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|241190194|ref|YP_002967588.1| branched-chain amino acid ABC-type transport system permease
           [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|241195600|ref|YP_002969155.1| branched-chain amino acid ABC-type transport system permease
           [Bifidobacterium animalis subsp. lactis DSM 10140]
 gi|183218470|gb|EDT89114.1| branched-chain amino acid ABC-type transport system permease
           components [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|240248586|gb|ACS45526.1| branched-chain amino acid ABC-type transport system permease
           component [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|240250154|gb|ACS47093.1| branched-chain amino acid ABC-type transport system permease
           component [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|295793181|gb|ADG32716.1| branched-chain amino acid ABC-type transport system permease
           component [Bifidobacterium animalis subsp. lactis V9]
          Length = 478

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 80/302 (26%), Gaps = 24/302 (7%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           I  L+  + A G+++V G+ GL S +      +G     +      + + L    +  I 
Sbjct: 199 IFGLMLGLMAVGMNLVYGTTGLSSFSHGEQVTLGGLMAYVGTQMLHMPVVLSAIFAVAIG 258

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
              G +                   M             I    A  Y+    +      
Sbjct: 259 ALAGWVQNQLVWAPLRHKRVGVMQQM----------IVTIGLSMALQYIYQFFFGGDIKG 308

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                        ++                 S+ ++L  T +  A R + DN     + 
Sbjct: 309 IVKSVPEGIQLGPIVTNAPTLIAAAIALVTIVSVTVFLYCTRLGRATRAVSDNAALAAAS 368

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              +       + +S     ++G       + I+ +    +  +++ + V LGG+ + + 
Sbjct: 369 GINVDSVVRIVWILSCGLAALSGVLIGIHLNGIAWNT-GVTLLMLMFAAVTLGGLGTANG 427

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                 I+  V ++   +                +                R   +   +
Sbjct: 428 ALVGALIVGIVADMSTLVIPSDMRYASALAILILVLLI-------------RPQGIFGKQ 474

Query: 344 TP 345
             
Sbjct: 475 KR 476


>gi|85703573|ref|ZP_01034677.1| putative permease abc transporter protein [Roseovarius sp. 217]
 gi|85672501|gb|EAQ27358.1| putative permease abc transporter protein [Roseovarius sp. 217]
          Length = 335

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 62/310 (20%), Positives = 122/310 (39%), Gaps = 29/310 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS      +   AY        +G S    I +   
Sbjct: 48  FVMKLLCFALFAAAFNLLLGYTGLLSFGHSAFFGGAAYFTAHAVKEWGWSPEFGILLGVA 107

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+IMG  +++ +G Y A+ TL +S++F    ++                      
Sbjct: 108 GAAGLGLIMGAIAIRRQGIYFAMITLALSQMFFFFCLQAGFTKG--------------ED 153

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++S+ R   F    +     MYY +LG+  L   II  +  +      ++IR+N+    
Sbjct: 154 GIQSVPRGELFGFIDLSDATNMYYFVLGVFLLGMVIIWRIVNSPFGMILKSIRENESRAT 213

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL  ++   KL+AF +S+A  G+AG   +      +     +  +  VI + +LGG+ +L
Sbjct: 214 SLGYSVTRYKLTAFVMSAALTGLAGGIKSLVFQFATLTDVTWQMSGEVILMTLLGGIGTL 273

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   I++ +       +F                 T +  +   + +L+    L+ 
Sbjct: 274 IGPIFGAGIVVTLQNYLATSDFPV---------------TIITGVVFMVCVLLFRRGLVG 318

Query: 342 LRTPSNFLER 351
               S    R
Sbjct: 319 EFYASRLGRR 328


>gi|295677428|ref|YP_003605952.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295437271|gb|ADG16441.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 316

 Score = 88.4 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 102/310 (32%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           I +  +   +Y + A G ++V G LG+++        +GA   +                
Sbjct: 8   ILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAIGVLQNHFPGLGNV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L + ++ +I+ A   ++G    +     L  A  +   I    +                
Sbjct: 68  LTLVIALVIAAAVCAVVGYTIERVAYRPLRRAPRLAPLITAIGVSILLQTLAMMIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L  T    +      +   +  +    +++    +   ++L + +T +  A R I
Sbjct: 128 LPFPQLLPTDPINVIKATDTTPGAVISMTEIVIIVVAFVVMGGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      +  +  F   + F + SA   +AG   A+        M  F   +   +  
Sbjct: 188 AENPNVASLMGVSPNFVISATFMIGSALAALAGVMIASEYGNAHFYM-GFIPGLKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        I L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLIVVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|192292555|ref|YP_001993160.1| urea ABC transporter permease [Rhodopseudomonas palustris TIE-1]
 gi|192286304|gb|ACF02685.1| urea ABC transporter, permease protein UrtC [Rhodopseudomonas
           palustris TIE-1]
          Length = 391

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/360 (13%), Positives = 107/360 (29%), Gaps = 38/360 (10%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFL------GATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           L++   +  +L     +LL L         A     Y+ S+  + + Y + A  + ++ G
Sbjct: 10  LDRGATVFLVLLAAIGILLPLLNLLTPESSALHVPTYLISLFGKYVCYALLALSIDLIWG 69

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G+LSL     +A+G Y+  +   R   +  +    +            LP   +  D 
Sbjct: 70  YCGILSLGHGAFFALGGYAMGMYLMRQIGTRGVYANPTLPDFMVFLNWKELPWYWYGFDM 129

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162
              A +++  +   +   +  +                          +  D  +     
Sbjct: 130 FWFAAVMVLLVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRNDFGFGGNNG 189

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +        F          ++ +      +   I   +  + +      IRD +     
Sbjct: 190 LTDFKDILGFNVQADGTRAALFMLSCLALAIGFFICRAVVTSKLGKVLIAIRDAESRTRF 249

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   +   KL  F +S+   G+AGA +      I+P  F    +I  +  V +GG  +L 
Sbjct: 250 LGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPSEFAPGNSIEAVIWVAVGGRGTLV 309

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             A    ++     +                         ++      V L+    ++  
Sbjct: 310 GAALGAIVVNYAKTVFTS-------------GPLAPYWLFMLGALFVAVTLLLPKGIVGT 356


>gi|120610555|ref|YP_970233.1| inner-membrane translocator [Acidovorax citrulli AAC00-1]
 gi|120589019|gb|ABM32459.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 309

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 99/305 (32%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G + L++        IGA +          ++      
Sbjct: 8   IINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMIGALTSWSCIGLMQEAMPGAPGW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++       +   +L F  + +A   L  S     ++         +    +  +  +
Sbjct: 68  VILLLATIIACVVAAALNFTIEKVAYRPLRSSPRLAPLITAIGMSILLQTLAMIIWKPNY 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+    F     +       +L       AS++  +  T +  A R   +N +
Sbjct: 128 --KPYPTLLPTTPFQIGGAVITCTQVLILAVTAIALASLVYLVNYTKLGRAMRATAENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + F + +    +AG  +A++       M  F   +   +  + GG+
Sbjct: 186 VAALMGVKPDMVISATFIIGAVLAAIAGIMYASNYGTAQHTM-GFLPGLKAFTAAVFGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  +  G        LL      +        I L +++ +R   
Sbjct: 245 GNLAGAVVGGILLGLIEAIGSGYIGTLTGGLLG-----SNYTDIFAFIVLIIILTLRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|33595628|ref|NP_883271.1| branched chain amino acid ABC transporter permease [Bordetella
           parapertussis 12822]
 gi|33565706|emb|CAE40354.1| probable permease component of branched-chain amino acid
           transporter [Bordetella parapertussis]
          Length = 320

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 68/294 (23%), Positives = 125/294 (42%), Gaps = 15/294 (5%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            +Y       I    +   GL +V G  G +SL      A+G Y   IL +R G+ ++  
Sbjct: 24  PEYQLYQVSLIAATAIIVLGLVVVCGIAGQISLGQAAFVALGGYGAAILATRLGVPLYAG 83

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           IP++A I    G ++GL +L+  G YLA+AT+ ++ I Q  +I    +T G AG+ +   
Sbjct: 84  IPLAAAICALLGYLLGLATLRVSGHYLALATMAVTAIVQLAVINLDDLTGGAAGMPMPPL 143

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                +     +Y V++ +  LS +++  L R+ I  A+  +R 
Sbjct: 144 EIAGHV---------------LDNGASLYLVIVPVFALSYALVRNLMRSRIGRAFGAVRQ 188

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
            + A  ++   ++  K SAFA S     + G    A    + P  +  ++ +  ++I ++
Sbjct: 189 GEIAAAAMGVNVLHYKASAFAASGFLGALGGGLLGALSSYLDPSQYGITQTVYYLAIAVV 248

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           GGM S       +AI + + E+  G+  Y          +F M     +   + 
Sbjct: 249 GGMASPLGALIGSAIFVFIPEVLQGLQSYLGLVFALLLLAFIMLRPAGLASFIV 302


>gi|264680645|ref|YP_003280555.1| membrane protein [Comamonas testosteroni CNB-2]
 gi|262211161|gb|ACY35259.1| Integral membrane protein [Comamonas testosteroni CNB-2]
          Length = 402

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/351 (14%), Positives = 101/351 (28%), Gaps = 33/351 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLG-----ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +   L  L +V  +   L L      A     Y+  +  + + Y + A  + ++ G  G+
Sbjct: 22  WTAFLLTLTMVCAVAPALNLWVPEDSALHLSDYMLGLLGKFMCYAICALAIDLIWGYTGI 81

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSI-----------WLLIPVSAMISGACGMIMGLPS 114
           LSL   + +A+G Y   +   R                W  +P    +SG+    + L  
Sbjct: 82  LSLGHGLFFALGGYVMGMYLMREAAGPDALPAFMGFLDWKELPWHWALSGSFAATVLLVF 141

Query: 115 LKFRGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           L                        +I            +  +  +              
Sbjct: 142 LVPGLIGGLFGYFAFRSRIKGVYFSIITQALTYAAMLLFFRNETGFGGNNGFTGFKTLLG 201

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F  +     + ++ +             WL R+      + +RD +          +  K
Sbjct: 202 FSVNSQAMHVLLFALSGLALLGCFLFSRWLMRSKYGRVLQAVRDAESRTMFCGYNPLPYK 261

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           LS + +S+   G+AGA +      I+P       +I +     +GG  SL         +
Sbjct: 262 LSIWVISAMMCGLAGALYVPQVGIINPSEMSVGNSIEMAVWTAVGGRASLVGPIIGAFAV 321

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            G                     +       ++     +V L     L+RL
Sbjct: 322 NGGKSWLT--------------VAAPEYWLYVLGALFIVVTLFMPGGLIRL 358


>gi|121609821|ref|YP_997628.1| ABC transporter-like protein [Verminephrobacter eiseniae EF01-2]
 gi|121554461|gb|ABM58610.1| ABC transporter related [Verminephrobacter eiseniae EF01-2]
          Length = 604

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/306 (16%), Positives = 111/306 (36%), Gaps = 22/306 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +  ++   I I  + A GL ++ G  G  S        I AY+   L +  GLS WL +
Sbjct: 25  SFTIALLNDIGIGALVALGLVLLTGIGGATSFGQAAFVGIAAYASAWLSTAQGLSPWLGL 84

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + +++G   + +G+ +L+  G +L ++T+        +    + +     G+     L
Sbjct: 85  VFALLLTGLSALAIGMLTLRLGGHFLPLSTIAWGLSIALLFGNVEQL-GRHTGLSNIPPL 143

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           +                   +     MYY++  +  L+      L  +    A R++R  
Sbjct: 144 H--------------LGGWSLARPQAMYYLIWTLLALALLFCHHLLHSRPGRAIRSLRGG 189

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                S+       +L+ F  +++F G+AG  +A     +SP  F    +I  + + + G
Sbjct: 190 ATLLASVGADAYRVRLTLFVTAASFAGLAGWLYAHMNRFVSPSPFDIHASIEYLLMAVAG 249

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+  LS      A+++ +      +   +     +            +       +    
Sbjct: 250 GLGQLSGALAGAALVLVLKNGLQDLLPMFTQRAGQLQAIAFAAGFIAL-------LHFAR 302

Query: 337 HSLLRL 342
             L+ L
Sbjct: 303 GGLMGL 308


>gi|71905913|ref|YP_283500.1| inner-membrane translocator [Dechloromonas aromatica RCB]
 gi|71845534|gb|AAZ45030.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Dechloromonas aromatica RCB]
          Length = 319

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 95/306 (31%), Gaps = 10/306 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +Q  IY + A G ++V G +GL++        IG     ++      S+      
Sbjct: 20  IINGLVQGSIYALVALGYTMVYGIMGLINFAHGEVVMIGT----LVTITVAGSLIKAGMP 75

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+   A      L  +        IA   +    +   +      +             
Sbjct: 76  VALAGLAGVSASVLVCMALGWGLERIAYRPLRNAPRLTPLITAIGMSIVLQNLAMMIWGR 135

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T   L+    F  +   +      ++L        ++L + RT +  A R    N  
Sbjct: 136 NYLTFPPLLPKMDFEFAGANFTAIQVIIVLVSAATMGGLLLLVYRTKLGMAMRATAQNPA 195

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   I     +AF + SA   +AG       + I+     F   +   +  +LGG+
Sbjct: 196 VASLMGVNINRVIAAAFVIGSALGALAGVMVGGYYE-IAHYQMGFMLGLKAFTAAVLGGI 254

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L  +  L  G         L      +        I L +V++ +   
Sbjct: 255 GNLGGAMLGGILLGIIEALGAGYIGDLTGGFLG-----SHYQDIFAFIVLIVVLMFKPSG 309

Query: 339 LLRLRT 344
           L   +T
Sbjct: 310 LFGEKT 315


>gi|269838171|ref|YP_003320399.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
 gi|269787434|gb|ACZ39577.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
          Length = 389

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 66/371 (17%), Positives = 137/371 (36%), Gaps = 46/371 (12%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQK----YIDSMGIQILIYVMFAWGLSIVVG 61
           ++       L + AV   ++L   + +  S      ++      + I  + A GL++  G
Sbjct: 1   MKEASKTTKLIVAAVTVAMILLPLIHSGGSVTAVIGFLVPFVTTVAILAIIAIGLNVQWG 60

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRY--------------------------GLSIWLL 95
             G+ +   V  + +GA+   I+                               L     
Sbjct: 61  YTGIFNFGVVGFFMVGAFVAAIVTKSPADSEFVQYVGGFGDRLAFLPFLDSREWLPFIFG 120

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  +A+ S    +++ L +L+ R DYLAI T+ ++E+ + + I+   + NG  G+    R
Sbjct: 121 VLAAALASALLALLLALSALRLREDYLAITTIGVAEVLRRVTIEETWLVNGTRGLTGIPR 180

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                 +Y      + L M FL   ++     +      R +R+
Sbjct: 181 PLAGW-------------FEPNVYRFVFLGLALAMLFLVYLMVERGISSPWGRVLRALRE 227

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF-KFSENIIVISIVI 274
           ++    +    +   K+  F + +A +G  GAFFA  +  ISP+ F  F    I+ ++++
Sbjct: 228 DEDVVAASGKNVFAFKVQGFVLGAAIMGAGGAFFAFQQGAISPETFTHFFGTFIIWAMLV 287

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           LGG  +       T ++ G   +   +  +     +    SF      ++   + +V+L 
Sbjct: 288 LGGSGNNVGAVVGTFVVWGFWSITLQIQSFKLPVFIVDRISF--FRDFIIGALIVVVLLA 345

Query: 335 RSHSLLRLRTP 345
               L+  R  
Sbjct: 346 GPKGLVPERAR 356


>gi|222082648|ref|YP_002542013.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727327|gb|ACM30416.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 556

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 81/323 (25%), Positives = 147/323 (45%), Gaps = 36/323 (11%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG-- 89
              +  ++  + + + +Y++   GL+I +G  GL+ L  V  +A+GAY+  +L S     
Sbjct: 256 PMITSDFVAQIAMLVALYMLMGMGLNIELGLAGLVDLGFVAFFAVGAYTIALLCSDGPLA 315

Query: 90  ---LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK--WKPIT 144
              +S WL +P++  ++   G + GLP L+ RGDYLA+ATL + EI + +++     PI 
Sbjct: 316 IADISFWLAMPIAIGLAATAGFLFGLPVLRVRGDYLAMATLGLGEIVRVLVLSDALAPIL 375

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G  G+    R       +      +    +      F              I   L+R+
Sbjct: 376 GGSQGVIGIKRPMLGDIVLNQPTELYYLALALAAVVAF--------------ISWRLQRS 421

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            I  AW  +R+++    +L    + +KL A+ V +AF G AGA FA     + P  F+  
Sbjct: 422 RIGRAWLALREDEDVAQALGIDPVASKLIAYTVGAAFAGAAGAVFAVLIGSVFPSSFQLL 481

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
            +I V++I+++GG+ SL  +    A+LIG+ EL      +                    
Sbjct: 482 VSINVLAILVIGGLGSLPGVLVGAAVLIGLPELLREFGEF---------------RYLFY 526

Query: 325 VIALFLVILMRSHSLLRLRTPSN 347
            +AL +++ +R+  L  ++  S 
Sbjct: 527 GLALVVMMHVRAEGLWPVKVASA 549


>gi|149915787|ref|ZP_01904312.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. AzwK-3b]
 gi|149810369|gb|EDM70214.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. AzwK-3b]
          Length = 657

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 104/322 (32%), Gaps = 26/322 (8%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
            L   ++   I        I+ + A GL+I  G +G++++       +GAY+  ++    
Sbjct: 357 MLAVYQTLDLILDGVSLASIFFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQLFI 416

Query: 89  GLS---IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
                 + + +P++  ++   G+ M    +        + TL+ +      L +      
Sbjct: 417 PDYTLSLLVALPLAFAVTFGAGVTMERLVI-RHLYTRPLETLLATFGISIALQQLAKNIF 475

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G     +              +      +  V        + +      A ++  L+RT 
Sbjct: 476 GTQARPLTAP---------DWLGGAITLNDIVGISTIRVAIFVLALIFLALLLYVLKRTR 526

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +    R +  N     S+        +  F + S   G+AG          S     +  
Sbjct: 527 LGLEVRAVTQNPGMAASMGINPDRINMLTFGLGSGIAGIAGVAIGLYAQVTSEMGANYIV 586

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
              +  +V    + ++       +++  + +    +N            S  +   T MV
Sbjct: 587 QSFMTVVVGG--VGNVWGTLAGASMIGFLQKGIEWLNP-----------SNTLAAQTYMV 633

Query: 326 IALFLVILMRSHSLLRLRTPSN 347
           + + L I +R   ++ L+  + 
Sbjct: 634 LFVILFIQVRPKGIVALKGRAA 655


>gi|332531346|ref|ZP_08407254.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
 gi|332039210|gb|EGI75628.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
          Length = 306

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 98/305 (32%), Gaps = 11/305 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G +GL++        +GA     +       +   + +
Sbjct: 8   IINGLVLGSMYALVALGYTMVYGIIGLINFAHGEVLMVGALVSWTVIGFIQPLLPPWLVL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +  AC +   L     R  Y  +            +     +      I+  +    
Sbjct: 68  LVALVVACLVAAVLNYTIERVAYRPLRNSPRLAPLITAIGMSILLQTLAMIIWKPN---- 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +  +L+                  +L+      A ++  +  T +  A R   +NQ+
Sbjct: 124 -YKSYPTLLPSEPISLGGASITPTQIMILVVTALTLAGLVWLVHGTKLGRAMRATAENQR 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + F + +    +AG  +A++   +   M  F   I   +  +LGG+
Sbjct: 183 VAALMGVQPNRVISATFVIGAMLAALAGVMWASNYGTVQHAM-GFIPGIKAFTAAVLGGI 241

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  +  G        +L      +          L +V+ +R   
Sbjct: 242 GNLAGAVVGGILLGLIESIGAGYIGDLTGGVLG-----SHYVDIFAFAVLIVVLTLRPSG 296

Query: 339 LLRLR 343
           LL  R
Sbjct: 297 LLGER 301


>gi|299065177|emb|CBJ36342.1| putative Branched-chain amino acid transport system permease,
           membrane component (livM) [Ralstonia solanacearum CMR15]
          Length = 328

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 59/325 (18%), Positives = 129/325 (39%), Gaps = 16/325 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++Y LLL   + A  +  Y   +  ++L + +FA   ++++G  GLLS      +    
Sbjct: 9   FILYGLLLAALIVAPLAGAYPVFVA-KLLCFALFASAFNLLLGYTGLLSFGHAAFFGGAG 67

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y    L     L+  L +          G+++GL +++ +G Y A+ TL ++++F    +
Sbjct: 68  YVAGYLMRDLNLTPELGLLAGTAAGALIGLVVGLLAIRRQGIYFAMITLALAQMFYFFCL 127

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +    T G+ G+    R                     +  ++ +YY +L +  ++  ++
Sbjct: 128 QAP-FTGGEDGLQGVPR-------------GKLLGMLDLSSDLTLYYFVLAVVVVAFLLV 173

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           +    +      + I++N+    SL       KL AF +S+A  G+AGA         + 
Sbjct: 174 VRTIHSPFGQILKAIKENEPRAISLGYDTDRFKLLAFVLSAALSGLAGALKTLVLGFETL 233

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-FN 317
               ++ +  VI + ++GG+  LS      A++I +      +  +          +   
Sbjct: 234 TDVHWAMSGSVILMTLVGGLGILSGPILGAALVIALENKLGDLGAFLAGVTGMDGFNVLG 293

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
              TT+      + +L     ++  
Sbjct: 294 ESVTTVTGAIFVICVLTFRRGIMGE 318


>gi|330957690|gb|EGH57950.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 214

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 23/224 (10%)

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTV--------RSLIRFFRFPSSFVIYEIFMYYV 186
             L     IT G  GI   ++  F G           ++   FF  P + +   IF+Y +
Sbjct: 1   MFLRNLTDITGGPNGISNIEKPTFFGLIFERKAAEGMQTFHEFFGLPYNSINKVIFLYLI 60

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            L +   +  +I  L R  I  AW  +R+++ A  +L       KLSAF + +AF G AG
Sbjct: 61  ALLLALAALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAG 120

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +FFAA +  I+P+ F F E+ I+++IV+LGGM S   +  A  ++I + EL    + Y  
Sbjct: 121 SFFAARQGLITPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSDY-- 178

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                           +    + L+++ R    L ++ P   L+
Sbjct: 179 -------------RMLMFGALMVLMMIWRPQGFLPMQRPEMKLK 209


>gi|146296947|ref|YP_001180718.1| inner-membrane translocator [Caldicellulosiruptor saccharolyticus
           DSM 8903]
 gi|145410523|gb|ABP67527.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 294

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 90/289 (31%), Gaps = 10/289 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++      + +GAY   +  +   L +   + +
Sbjct: 8   LINGITLGSVYALIALGYTMVYGIIKLINFAHGDVFMVGAYIAFLCVTYLKLGLLPALII 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +     GM++   + K   +   I+ LI +      L     +  G         +  
Sbjct: 68  SMIFCALLGMLIEKFAYKPLRNSPRISALITAIGVSLFLENLMQLLMGADSKVFPRLVNE 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +             V+      Y+L+    L   +   ++ T I  A R +  +  
Sbjct: 128 KNYHLFH---------GKVVVNSKQIYLLVITVLLMLLLNFIVKNTKIGKAMRAVSQDMD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA     G       + I+P M      +      + GG+
Sbjct: 179 AARLMGINVDTTISYTFAIGSALAAAGGVLVGLYYNTINPLM-GVLPGLKAFIAAVFGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +         L  +  L  G     +   + F     +       + 
Sbjct: 238 GIIPGAMLGGFSLGVIETLVSGYGSSMYKDAVAFALLILILILKPSGLL 286


>gi|319790791|ref|YP_004152431.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315593254|gb|ADU34320.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 317

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 67/327 (20%), Positives = 128/327 (39%), Gaps = 24/327 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               V     L + +       Y     ++++I  +FA  L ++VG  GL+SL     Y 
Sbjct: 5   GAFLVPLACALLIGIAGPLMGNYASDFVVKVMILSIFALSLELLVGMTGLVSLGHAAFYG 64

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY  V+     G +  LL+P++   +    + +G  SL+ RG Y  + TL  +++   
Sbjct: 65  IGAYVTVLASGSEGGNFALLLPMAVGAAALYALFVGALSLRTRGVYFIMVTLAFAQMAFF 124

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +      +  G  GIY+  R       + +                 ++YV+L     + 
Sbjct: 125 VFHD-TKVGGGSDGIYMYVRPAIGALDLENRT--------------VLFYVVLASLVFTY 169

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++  +RR+    A   IR N++   +    +   KL+AF ++ A  G+AG   A+    
Sbjct: 170 GLLALIRRSRFGAALAGIRVNEQRMRAAGFPVYGYKLAAFVLAGALAGLAGFLLASRDGV 229

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P++  +  +  V+ +VILGG+  L            + E+                  
Sbjct: 230 VNPELMAWHNSGEVLLMVILGGLGHLRGAVIGAIAFTLLKEIFST---------HAVMGP 280

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                   + IA+ + +      L+ L
Sbjct: 281 LADHWQLTLGIAIIVFVAWLPKGLIGL 307


>gi|167586401|ref|ZP_02378789.1| inner-membrane translocator [Burkholderia ubonensis Bu]
          Length = 452

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 79/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +              +++              
Sbjct: 178 ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRFAPAAFDWYPLVAVPASFAAAALVGIV 237

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         + +      +     S +         +
Sbjct: 238 LER--LVLRHLYGRPLETLLATFGVSLILIQAMRMLFGAQNVQVVNPSWMSGGVTVMQNL 295

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 296 ILPYNRLVILAFALAVVFVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 355

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          +  I     V+LGG+  ++        L  V + 
Sbjct: 356 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 413

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 414 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 451


>gi|239813104|ref|YP_002942014.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239799681|gb|ACS16748.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 324

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 65/330 (19%), Positives = 131/330 (39%), Gaps = 24/330 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               V     + + +       Y+    ++++I  +FA  L ++VG  GL+SL     Y 
Sbjct: 12  GAFLVPVACAIAIGVLGPLMGNYVSDFVVKVMILSIFALSLELLVGMTGLVSLGHAAFYG 71

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY  V+     G ++ LL+P++   +    + +G  SL+ RG Y  + TL  +++   
Sbjct: 72  IGAYVTVLASGSEGGNLALLLPLAMGAAALYALFVGALSLRTRGVYFIMVTLAFAQMAFF 131

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +      +  G  GIY+  R       + + +               ++Y++L     + 
Sbjct: 132 VFHD-TKVGGGSDGIYMYVRPAIGKLDMENRM--------------VLFYIVLASLVFTY 176

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++  +RR+    A   IR N++   +    +   KL+AF ++ A  G+AG   A+    
Sbjct: 177 GLLALVRRSRFGAALAGIRVNEQRMRAAGFPVYGYKLAAFVLAGALAGLAGFLLASRDGV 236

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P++  +  +  V+ +VILGG+  L            + E+                  
Sbjct: 237 VNPELMAWHNSGEVLLMVILGGLGHLRGAVIGAIAFTLLKEIFST---------HAVMGP 287

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                   + IA+ + +      L+ L   
Sbjct: 288 LADHWQLTLGIAIIVFVAWLPKGLIGLAKR 317


>gi|254488829|ref|ZP_05102034.1| ABC transporter permease protein [Roseobacter sp. GAI101]
 gi|214045698|gb|EEB86336.1| ABC transporter permease protein [Roseobacter sp. GAI101]
          Length = 311

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 115/292 (39%), Gaps = 14/292 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++    +   LL   F+       Y+  + I+ ++  + A  L +++G  G++SL     
Sbjct: 1   MIVAAVIFGLLLAMPFVLPLVGGAYLTGLLIKAMLLAIAAISLDLLIGHGGMISLGHAAF 60

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             +GAY+  I       +I +L+ ++ +++G   +I G  +L+  G Y  + TL   ++ 
Sbjct: 61  VGVGAYAAAIGLENGVENILVLLVITLVVTGTVALITGSLALRTSGVYFLMITLAFGQMI 120

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
              L                         +        F S  V     +Y+V+LG    
Sbjct: 121 YFTLTSLAAYGG--------------DDGLTLWSLATLFGSDIVQGGSGLYFVVLGTLLA 166

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +   +  +  +      R  RDN      +  ++   +L A+ +++   G++G       
Sbjct: 167 TWWGVYRISLSRFGRVLRAARDNPGRAEVMGYSVTRYRLIAYVIAAMIAGVSGLLLVQHA 226

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           + +SP +  +  +  +I +++LGG+ S +        ++ V E+  G    +
Sbjct: 227 EFVSPALATWQRSGDLIVVIVLGGLGSRNGAILGAFFIVIVEEVLGGFFHEW 278


>gi|121611556|ref|YP_999363.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121556196|gb|ABM60345.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 310

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 55/305 (18%), Positives = 122/305 (40%), Gaps = 29/305 (9%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y   +  ++L++   A   + + G  G L+L+    Y +GAY+ VIL  + GL + L  
Sbjct: 23  AYHTDVYRKLLLWSALALSFNFLFGISGQLALSHFTFYGLGAYAIVILSHQVGLPLPLAA 82

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +  +       + +P+ +  G YLA+ATL ++++   +L +   +T G  G+      
Sbjct: 83  MGALALCIVVSAAVAIPATRLEGFYLALATLALAQLVTVLLNEGGALTGGSNGLANYGVP 142

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                              F +  + +   ++ +  L+  ++  L R+    A R +RD+
Sbjct: 143 S---------------VLGFRLEGMNLTAAVILLLVLTFGLLRRLDRSQFGRACRAVRDD 187

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                ++   +   K++A+ ++S     AG  +A     ++P  F      +++  VI+G
Sbjct: 188 PAVASAMGIDVSRTKIAAYMLASCLAAAAGMCYAFVDRNVNPAAFGIEYGFLLLFAVIVG 247

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S         ++  +      +  +               H  +  I + L++L+  
Sbjct: 248 GVGSQWGAIFGGVLVFVLPLFLAPLIGH--------------YHALIFGIVVVLIMLLEP 293

Query: 337 HSLLR 341
             L+ 
Sbjct: 294 RGLVG 298


>gi|299134327|ref|ZP_07027520.1| inner-membrane translocator [Afipia sp. 1NLS2]
 gi|298591074|gb|EFI51276.1| inner-membrane translocator [Afipia sp. 1NLS2]
          Length = 334

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 57/327 (17%), Positives = 119/327 (36%), Gaps = 29/327 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  +  +      L L    + +Y  ++  QI+I  + A  L++++G  G++SL      
Sbjct: 6   LNWMVWLAGFAALLALPWLVTSEYYINIASQIVIAAILALSLNLLIGFGGMISLGHAAYL 65

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + AY  + L ++ G        ++   + A  M+ G  SL+  G    + TL + +I  
Sbjct: 66  GVSAYLAIYLTAQAGFGQLSGALIAIGGTTALAMLFGYLSLRASGLGFLMITLALGQILW 125

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I  +W  +T G  G+    R +  G  +                    YY +L    L+
Sbjct: 126 GIAYRWASLTGGDNGLGGMKRPHPFGLDLTH--------------PAIFYYFVLFFLGLA 171

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              I    ++ +  + +  RD  +   +L   +   +  +F  +  +  +AG  +A    
Sbjct: 172 LWCIARFIQSGLGQSLQGTRDQPRRMRALGYNVWLIQWLSFVFAGFWGAVAGLLYAYYHQ 231

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            +SP     + +   + +VI GG  +L       A+++ +  +       +         
Sbjct: 232 FVSPQTLHLTTSAEALLMVIAGGTGTLFGPVVGAALVVILKNVVSAYITRW--------- 282

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   L+      ++L     LL 
Sbjct: 283 ------LILLGAIFVAIVLFMPEGLLP 303


>gi|296110587|ref|YP_003620968.1| branched-chain amino acid ABC transporter, permease protein
           [Leuconostoc kimchii IMSNU 11154]
 gi|295832118|gb|ADG39999.1| branched-chain amino acid ABC transporter, permease protein
           [Leuconostoc kimchii IMSNU 11154]
          Length = 290

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 102/303 (33%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GAY          ++ ++ + +
Sbjct: 6   LINGVILGSVYALLALGYTMVYGIIKLINFAHGDIYMLGAYFGYFFLRVMHMNFFIALIL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S  I    GM++   + +       IA LI +      L        G            
Sbjct: 66  SMAICAVLGMLIEFIAYRPLRHSPRIAVLISALGVSFFLENGMSYLFGSD---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +    I+  ++    +        ++     L   + + +++T +  A R +  +++
Sbjct: 116 -KRSFPQAIKTIQYHFGSLQISNIQIIIISTAIILMILLNIIVKKTKMGRAMRAVSADEE 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA     G       + I P M   +  I      +LGG+
Sbjct: 175 AAILMGINVNRTISFTFAIGSALAAAGGVLIGLYYNNIDPLM-GMTPGIKAFVAAVLGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +  +   +               +     ++   L +V+L +   
Sbjct: 234 GIIPGAALGGWLIGILETMTQAVG-------------LSNYKDAIVYAILIVVLLFKPTG 280

Query: 339 LLR 341
           +L 
Sbjct: 281 ILG 283


>gi|254473724|ref|ZP_05087119.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudovibrio sp. JE062]
 gi|211957110|gb|EEA92315.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudovibrio sp. JE062]
          Length = 351

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/333 (14%), Positives = 118/333 (35%), Gaps = 11/333 (3%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             ++  L   +F               +I I+++      +++G  G++S    + + IG
Sbjct: 18  AVLLLILFGLMFAPFLFPGTRSLDTAARICIFIVLVASYDLLLGYTGVVSFAHTMFFGIG 77

Query: 78  AYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AY   +          +I L     A+++GA   ++ L SL+ +  + A+ TL ++  F 
Sbjct: 78  AYGTALALVNMGASYSAIVLGTVCGAVVAGAFAFVIALFSLRVKAIFFAMMTLAVASAFL 137

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++ +   IT G+ G+                 +      +    ++  YYV+       
Sbjct: 138 VLISQLSGITGGEDGLSYRIPREMTPAFKLVKEKVLGVRLNG---KLITYYVVFFSSLCL 194

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             ++L +  +      + IR+N     ++   ++  +  A  +S+    +AG+  A    
Sbjct: 195 FLVLLRMVNSPFGRVLQAIRENAFRAEAIGYKVVRYRSVATILSAVVAALAGSLMAIWLR 254

Query: 255 RISP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYYFNSL 309
              P         + ++ +V++GGM S+        + +     +  L   +     +  
Sbjct: 255 YTGPATTLSMDIMVDILLMVVIGGMGSMYGAVIGAVLFLLTQSYLQNLLGILQESLGSLP 314

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +  +     R    + I     I      ++  
Sbjct: 315 VVSEVVSPERWLLWLGILFICSIYWFPKGVVGR 347


>gi|172059856|ref|YP_001807508.1| urea ABC transporter permease protein UrtC [Burkholderia ambifaria
           MC40-6]
 gi|171992373|gb|ACB63292.1| urea ABC transporter, permease protein UrtC [Burkholderia ambifaria
           MC40-6]
          Length = 394

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/347 (13%), Positives = 95/347 (27%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I     V    L+     A     Y  ++G +++ Y + A  L +V G  G+LSL   + 
Sbjct: 51  IAIGAGVPLAALVAPESSAFHLSAYAMTLGGKLMCYAIAALALDLVWGYCGILSLGHGLF 110

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 111 FALGGYAIGMYLMREIGRDGKYGSDLPDFMVFLDWHQLPWYWSGTQHLAWALALVVLVPA 170

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            +  +  +          R   F  +
Sbjct: 171 VLAWVFGFFTFRSRVKGVYLSIITQALTFAAMLLFFRNETGFGGNNGFTDFKRIAGFAIT 230

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +  +      L+      +  + +      +RD +     L  + +  KL  +
Sbjct: 231 SPGTRTVLLLLTFATLVLAFIAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 290

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            +S+   G+AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 291 TLSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 350

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                               F       + +   LV L+    ++ L
Sbjct: 351 SFFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGL 383


>gi|46198389|ref|YP_004056.1| branched-chain amino acid transport system permease protein livM
           [Thermus thermophilus HB27]
 gi|46196011|gb|AAS80429.1| branched-chain amino acid transport system permease protein livM
           [Thermus thermophilus HB27]
          Length = 366

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 89/238 (37%), Gaps = 15/238 (6%)

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
           G   +  G P  + +  YLA+ATL    +F+  +     +  G A       L       
Sbjct: 124 GLLRVPGGHPEPRVKHLYLAMATLAFQVVFEWTVGHLPLLNQGGAMPLPRVGLLGYEVGF 183

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
           R+   F+             YYV   +  L A     L RT    A   +RDN +A  ++
Sbjct: 184 RNHYHFW-------------YYVSFAVLVLLALFFRNLLRTKYGRALVAVRDNDRAADAM 230

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
                  KL AFA+ + + G+AGA +A     +  + + FS +I ++++ I+GG+ +L  
Sbjct: 231 GMDPGRTKLFAFALGAFYAGVAGALYAYLSRAVVIEDYTFSVSIKLLAMAIVGGLGTLVG 290

Query: 284 IAKATAILIGVVELCCGMNFYY--FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
                A L  +      ++         +      +        + + L ++     L
Sbjct: 291 SFLGPAFLELLDVNMEALSNLIKALGFSVAGVDVASALRPLAFGLVIVLFLVFEPRGL 348


>gi|304394450|ref|ZP_07376371.1| inner-membrane translocator [Ahrensia sp. R2A130]
 gi|303293360|gb|EFL87739.1| inner-membrane translocator [Ahrensia sp. R2A130]
          Length = 331

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 101/302 (33%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           LAV+  L   +   +   + +  ++  +I I  + A GL++ +G+ GL+S      +  G
Sbjct: 13  LAVLLMLPAAVLWASATGETFTITLATRIAILAIAATGLNLALGNGGLVSFGHAAFFGAG 72

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y   IL S    S  L+     +       ++ L ++       A+  L          
Sbjct: 73  GYVCGILASHAFTSEPLMTVPFLIEGTKSMPVIWLVAIVVSALLAALIGLFALRTAGVYF 132

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I            +      + G           FP    +  +  + V   +  L   +
Sbjct: 133 IMLTLAFAQMIYYFAISFPGYGGEDGLPTYVRNGFPGLNTLVPLPFFIVCFVVLALVIWL 192

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +     +    A    R N +   ++       +  AF +S A  G+AGA +      +S
Sbjct: 193 VDRFTHSRFGLALAAARQNGERLEAVGIAPFRIRYVAFILSGAITGLAGALYTDLNRFVS 252

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P M  +  +  +I  +ILGG   L       A+ + +     G   ++   +        
Sbjct: 253 PSMLSWQTSGELIVFIILGGTARLFGPLLGAALFVVLENTLGGWTEHWQFFVGLILLGVV 312

Query: 318 MR 319
           + 
Sbjct: 313 LF 314


>gi|172059155|ref|YP_001806807.1| inner-membrane translocator [Burkholderia ambifaria MC40-6]
 gi|171991672|gb|ACB62591.1| inner-membrane translocator [Burkholderia ambifaria MC40-6]
          Length = 324

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/302 (16%), Positives = 123/302 (40%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS    +  A   Y         G +  L + V   
Sbjct: 26  FVMKVLTFALFAAAFNLLIGYTGLLSFGHAMFLATAGYGTGYAIQTLGFTPELGVLVGTF 85

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+++GL +++ +G Y A+ TL  +++   I ++                      
Sbjct: 86  AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTRGED 131

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  ++ +YYV+L +   + + I+ +  +        I++N+    
Sbjct: 132 GLQGVPRGHLFGLVDLSNDVALYYVVLTVIVAACAFIVRIVHSPFGQVLVAIKENEARAI 191

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+   G+AG+         +     ++ + +V+ + ++GGM +L
Sbjct: 192 SLGYDTDRFKLLAFILSAGLAGLAGSLKVLVLGFETLSDAHWTMSGLVVLMTLVGGMGTL 251

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +    +  +  + + + +  S     T +  +     +L     ++
Sbjct: 252 FGPLLGAALIVALEDRLGDIGEWLASVTGIGWFHSLGESTTIVTGLIFIACVLAFRRGIV 311

Query: 341 RL 342
             
Sbjct: 312 GE 313


>gi|187922953|ref|YP_001894595.1| urea ABC transporter permease [Burkholderia phytofirmans PsJN]
 gi|187714147|gb|ACD15371.1| urea ABC transporter, permease protein UrtC [Burkholderia
           phytofirmans PsJN]
          Length = 394

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 102/349 (29%), Gaps = 32/349 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             ++  L V +  L+     A     Y  ++  + + Y + A  L +V G  G+LSL   
Sbjct: 49  LIVVFGLGVPFCTLVVPETSALHLSAYAMTITGKFMCYAIAALALDLVWGYCGILSLGHA 108

Query: 72  IAYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLP 113
           + +A+G Y+  +                                      G   +++ L 
Sbjct: 109 LFFALGGYAIGMYLMRSIGHEGKYGSDLPDFMVFLDWHQLPWYWQGTQHLGYALLLVVLV 168

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
                  +         +     +I            Y  +  +          R   FP
Sbjct: 169 PAVVAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIGGFP 228

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
            +       +  +   +  L+      +  + +      +RD +     L  + +  KL 
Sbjct: 229 ITHPGTRTALLLITFAVLILAFLGARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLF 288

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            + VS+   G+AGA +      I+P       +I +   V +GG  +L         + G
Sbjct: 289 VWTVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIIGAFAVNG 348

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                             F  +F       + +   LV L   + ++ L
Sbjct: 349 AKSF--------------FTANFPEYWLFFLGLIFVLVPLFLPNGIMGL 383


>gi|330953091|gb|EGH53351.1| inner-membrane translocator [Pseudomonas syringae Cit 7]
          Length = 359

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 96/324 (29%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
             +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  GFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      M L  L      L           + +     
Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDHFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  S       ++   + +   S  I 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRAALFLATVALLVASLYIG 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTMAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                      +V L     ++ +
Sbjct: 329 YWLFFFGALFIIVTLYLPKGVIGM 352


>gi|312793572|ref|YP_004026495.1| inner-membrane translocator [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180712|gb|ADQ40882.1| inner-membrane translocator [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 312

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 72/338 (21%), Positives = 135/338 (39%), Gaps = 42/338 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K   +  +  +V  L++ L +       YI      I++ ++ A  L+++ G  G  S
Sbjct: 1   MKKRLLVYSVFVIVLYLIITLLMKMGIIDDYIKLNLFLIMLNIILAVSLNLINGITGQFS 60

Query: 68  LNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           L      AIGAY+   +      +  +L + +  + +  CG+I+GLP L+ RGDYLAIAT
Sbjct: 61  LGHAGFMAIGAYTTAVLTTLEKPVPFYLTVLIGGLFAMICGLIIGLPVLRLRGDYLAIAT 120

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + I+     +  G +GI    +                               
Sbjct: 121 LGFGEIIRVIIQNIDYL-GGASGISDIPQGIDWTGYF----------------------- 156

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
              +  LS  +IL +  ++   A   IR+++ A  ++       K+ AF + + F G+AG
Sbjct: 157 --VITVLSVVVILNIINSSFGRAMIAIREDEIAAEAMGINTTLYKVLAFMIGAFFAGVAG 214

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           + ++ S   I PDMF F ++I ++ IV+               +          ++    
Sbjct: 215 SVYSGSFGFIQPDMFNFFKSIDILVIVV---------------LGGLGSISGSIISAIVL 259

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             +      +      L  + L +++L R   L+  + 
Sbjct: 260 TIISALLQDYPAVRMVLYALILIIIMLFRPQGLMGTKE 297


>gi|197301483|ref|ZP_03166562.1| hypothetical protein RUMLAC_00215 [Ruminococcus lactaris ATCC
           29176]
 gi|197299443|gb|EDY33964.1| hypothetical protein RUMLAC_00215 [Ruminococcus lactaris ATCC
           29176]
          Length = 294

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 105/306 (34%), Gaps = 24/306 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      +Y + A G ++V G   +L+        IGAY  ++  ++ G+ +   +
Sbjct: 5   SYLVNGLSLGSVYALIALGYTMVYGIAKMLNFAHGDVIMIGAYVALVSMNQAGMPVPAAV 64

Query: 97  PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
            +S ++    G++M   +    R    ++A LI +     +L     +  G         
Sbjct: 65  LISIVVCTVLGVVMERIAYKPLRNASSSLAVLITAIGVSYLLQNVALLIFGANAKTFPSV 124

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           + + G +V             +         ++    +   ++ ++++T    A R + +
Sbjct: 125 IKWKGISVAG---------GELKISGETIVTIVVCVVIMVVLMAFVQKTKPGQAMRAVSE 175

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A   +   +       FA+ S    +AG    ++   ++P        I      + 
Sbjct: 176 DRGAAQLMGINVNGTIALTFAIGSGLAAVAGVLLCSTYPSLTPYT-GAMPGIKAFVAAVF 234

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S+        +L  +                            ++   L +V+L++
Sbjct: 235 GGIGSIPGAFIGGILLGLIEIFSKAYISSQMADA-------------IVFAVLIVVLLVK 281

Query: 336 SHSLLR 341
              LL 
Sbjct: 282 PTGLLG 287


>gi|325519801|gb|EGC99096.1| branched-chain amino acid ABC-type transport system permease
           component [Burkholderia sp. TJI49]
          Length = 360

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 105/305 (34%), Gaps = 25/305 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  I   IY + A GL+++ G   L++      Y +GA+   +  +R+GL + +  
Sbjct: 6   DYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVAF 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +  GA G+ +    L+       IA L+ +     IL +   +  G     V   L
Sbjct: 66  AAVVVGCGALGVAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPL 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                        +       +A +  +LR T +  A R    +
Sbjct: 126 PDWH-----------LRLGGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +     + FA++ A  G++G       + I P M  F   +  +  +++G
Sbjct: 175 RDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAM-GFQATLKGVVALLIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++      + +L  V      +    +  L  F               L + ++ R 
Sbjct: 234 GLGNVPGAIAGSLLLGLVESYGVALFGTSYRDLFAFG-------------LLIVFLVWRP 280

Query: 337 HSLLR 341
           + L  
Sbjct: 281 NGLFS 285


>gi|296536412|ref|ZP_06898512.1| urea ABC superfamily ATP binding cassette transporter, permease
           protein [Roseomonas cervicalis ATCC 49957]
 gi|296263262|gb|EFH09787.1| urea ABC superfamily ATP binding cassette transporter, permease
           protein [Roseomonas cervicalis ATCC 49957]
          Length = 366

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/335 (13%), Positives = 88/335 (26%), Gaps = 33/335 (9%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
                A     +  S+  + + Y + A  + +  G  G+LSL     +A+G Y+  +   
Sbjct: 39  LPPDAALYVSDFTVSVSGKWICYAILALAIDLAWGYAGILSLGHGAFFALGGYAIGMHLM 98

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM----------------- 129
           R      +                 LP   +       A  +                  
Sbjct: 99  RLIGPRGVYGHPVLPDFMVFLGWTELPWYWWGFSSFPFAFTMALVVPGLLAGLVGYLAFR 158

Query: 130 --SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                    +I            +  D  +                 +       ++Y  
Sbjct: 159 SRITGVYLSIITQAMTYALMLAFFRNDMGFGGNNGFTDFKELLGLRLNTAEARAALFYAA 218

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L     +  +   + R+ +      +RD +     L    +  KLS F +S+   G+AGA
Sbjct: 219 LLALAGALLLCRHVTRSKLGRVLVAVRDAESRVRFLGYDTVRVKLSVFVLSAMLAGLAGA 278

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +      I+P  F    +I  +  V +GG  +L         +  +             
Sbjct: 279 LYTPLVGIINPGEFSPGNSIEAVVWVAVGGRGTLVGALVGAFSVNAIKTWLTSFA----- 333

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                          ++      V L     L+ L
Sbjct: 334 ---------PDLWLFVLGGLFVAVTLFLPRGLVGL 359


>gi|139437972|ref|ZP_01771525.1| Hypothetical protein COLAER_00512 [Collinsella aerofaciens ATCC
           25986]
 gi|133776169|gb|EBA39989.1| Hypothetical protein COLAER_00512 [Collinsella aerofaciens ATCC
           25986]
          Length = 296

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 99/305 (32%), Gaps = 24/305 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ +      +Y + A G ++V G   +L+        +GAY      S  GL  W  +
Sbjct: 9   QYLVNGLSMGSVYAIIALGYTMVYGIAKMLNFAHGDVIMVGAYVSFCATSYLGLPGWASV 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +S ++    G+++   + K       +A LI +      L     +  G         +
Sbjct: 69  VLSCVVCTVLGVLIEGLAYKPLRQAGPLAVLITAIGVSYFLQNAAQLLWGATPKNFTSLV 128

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
            F                +           ++    + A ++ +  +T +  A R + ++
Sbjct: 129 TFPVPEF----------LAKFNVSAVSLVTIVACLVIMAGLMFFTGKTKMGKAMRAVSED 178

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ SA   +AG    +    + P        I      + G
Sbjct: 179 KAAAQLMGINVNRTISMTFAIGSALAAIAGVLLCSYSPVLQPTT-GAMPGIKAFDAAVFG 237

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        ++  +  +          + + F               L +V+L++ 
Sbjct: 238 GIGSIPGAFVGGILIGIIEAMAQAYISTSLANSIVFG-------------VLIIVLLVKP 284

Query: 337 HSLLR 341
             LL 
Sbjct: 285 AGLLG 289


>gi|71907068|ref|YP_284655.1| inner-membrane translocator [Dechloromonas aromatica RCB]
 gi|71846689|gb|AAZ46185.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Dechloromonas aromatica RCB]
          Length = 371

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/350 (14%), Positives = 109/350 (31%), Gaps = 32/350 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +   L L+ +    L F    A     Y  ++  +I+ Y + A  + ++ G  G+LSL  
Sbjct: 23  FFLALALVVIPVLHLNFPEDSALHVSTYAITLIGKIMCYALVAVAMDLIWGYGGILSLGH 82

Query: 71  VIAYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSL 115
            + +A+G Y++ +                        W  +P   + S + G +  L   
Sbjct: 83  GLFFALGGYAFGMYLMRQIGRDGSYGADLPDFMVFLDWKELPWFWVGSDSFGWVAFLVMA 142

Query: 116 KFRGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
                                   +I            +  +  +          R   +
Sbjct: 143 VPAVVAFVFGYFAFRSRIKGVYFSIITQALTYAAMLLFFRNETGFGGNNGFTDFKRVLGY 202

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
             +     + ++ +   M  ++     WL ++        IRD +     +    ++ KL
Sbjct: 203 SVTSSETRLVLFGLTAVMLAVTLVFAAWLVKSKFGRVLTAIRDAESRVMFIGYNPLWYKL 262

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
           + + +S+   G+AGA +      I+P       +I +   V +GG  +L        ++ 
Sbjct: 263 TIWVISAVLCGIAGALYVPQVGIINPSEMSPGNSIEIAIWVAVGGRGTLIGPIIGAFVVN 322

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                              F  SF       + +   +V LM    L+ L
Sbjct: 323 LAKSW--------------FTVSFPEYWLFFLGLLFIVVTLMLPQGLVGL 358


>gi|264677025|ref|YP_003276931.1| High-affinity branched-chain amino acidtransporter permease livH
           [Comamonas testosteroni CNB-2]
 gi|299532555|ref|ZP_07045945.1| High-affinity branched-chain amino acidtransport system permease
           protein livH [Comamonas testosteroni S44]
 gi|262207537|gb|ACY31635.1| High-affinity branched-chain amino acidtransport system permease
           protein livH [Comamonas testosteroni CNB-2]
 gi|298719502|gb|EFI60469.1| High-affinity branched-chain amino acidtransport system permease
           protein livH [Comamonas testosteroni S44]
          Length = 309

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 102/305 (33%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G + L++        +GA +          ++  L   
Sbjct: 8   IINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMVGALTSWSCIGLMQEAMPYLPGW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++  A    +   SL F  + +A   L  S     ++         +    +  +  +
Sbjct: 68  LMLLIAAIIACVVAASLNFVIEKVAYRPLRNSPRLAPLITAIGVSILLQTLAMIIWKPNY 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+    +     +       VL+      A+++  +  T +  A R   +N +
Sbjct: 128 --KAYPTLLSSTPYEIGTAVITPTQILVLVVTAIALATLMYLVNYTRLGRAMRATAENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + F + +    +AG  +A++       M  F   +   +  + GG+
Sbjct: 186 VAALMGVKPDMVISATFIIGAVLAAIAGIMYASNYGTAHHTM-GFLPGLKAFTAAVFGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  +  G        +L      +        I L +++ +R   
Sbjct: 245 GNLAGAVVGGLLLGLIESIGSGYIGDLTGGVLG-----SQYTDIFAFIVLIIILTLRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|116750524|ref|YP_847211.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
 gi|116699588|gb|ABK18776.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
          Length = 340

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 67/356 (18%), Positives = 131/356 (36%), Gaps = 47/356 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +  L  V+  +LL           YI  + + I I ++ +  L++V G +G  S+   
Sbjct: 2   RSLSILAYVLLGILLVAGAMGNWVNSYIQLVIMYIGINIILSSSLNLVNGYMGEFSVGHA 61

Query: 72  IAYAIGAYSYVILGSRYGLS-----------------IWLLIPVSAMISGACGMIMGLPS 114
              A+GAY   +L   +                      + + +  + +   G+++ +PS
Sbjct: 62  GFMAVGAYITSVLNVWFFTDSTIFGPSLFPPVSAVVLFPVTLLIGGIGAALAGLLVAIPS 121

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
            + RGDYLAI TL ++ I ++ +   + I   +  + +   +  +               
Sbjct: 122 FRTRGDYLAIITLAVNYIVKSSIENLQVIGGARGFMGMGGVVNAMK-------------- 167

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
              +   ++   +L    L+  ++     +        IRD++ A   ++      K+ A
Sbjct: 168 -SAVPVPWVLIWVLIATGLTIWVLYRFVNSTYGKGIVAIRDDEIAAEIMSVDTRRMKMVA 226

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F +SS   G+AG  FA     I+P  F   ++  V+ +V LGGM SLS    +  IL   
Sbjct: 227 FMLSSGLAGIAGGLFAHVLGYINPGTFTIMKSTEVLVMVYLGGMGSLSGSVLSAVILTVG 286

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           +EL      + +  +        +                R   L   R  ++   
Sbjct: 287 LELFRSFQVWKWVVVPLLLILLML---------------FRPEGLFGHRELTDVFP 327


>gi|163854601|ref|YP_001628899.1| branched chain amino acid ABC transporter permease [Bordetella
           petrii DSM 12804]
 gi|163258329|emb|CAP40628.1| Branched-chain amino acid transport system, permease component
           [Bordetella petrii]
          Length = 541

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 83/291 (28%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY    + + + L     +    + +     ++       
Sbjct: 268 ITFGLMGVINMAHGELLMIGAYVTYAVQALFRLWFPQWLDAYVIAALPAAFVVTALVGMA 327

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         +        +     S +         +
Sbjct: 328 LER--TVIRWLYGRPLETLLATWGISLMLMQAVRTLFGAQNVEVGNPSWMSGGITVLGNL 385

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++     +   + L L  T +    R I  N++    +        + AF +
Sbjct: 386 VLSYNRIAIVAFAVLVVVFVWLLLNHTRLGLFVRAITQNRRMADCVGVPTGRIDMLAFGL 445

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG   +   +         +  +    +V+LGG+  L+    A   L  V + 
Sbjct: 446 GSGIAGLAGVALSQLGNV--GPDLGRAYIVDSFMVVVLGGVGQLAGTVVAALGLGAVTKF 503

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               +                     ++  + L +  R   L   R  S  
Sbjct: 504 LEPYSGAVMAK-------------ITILALIVLFVQKRPQGLFAPRGRSAE 541


>gi|17548057|ref|NP_521459.1| transmembrane ABC transporter protein [Ralstonia solanacearum
           GMI1000]
 gi|17430363|emb|CAD17128.1| probable transmembrane abc transporter protein [Ralstonia
           solanacearum GMI1000]
          Length = 328

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 60/325 (18%), Positives = 130/325 (40%), Gaps = 16/325 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++Y LLL   + A  +  Y   +  ++L + +FA   ++++G  GLLS      +    
Sbjct: 9   FILYGLLLAALIVAPLAGAYPVFVA-KLLCFALFASAFNLLLGYTGLLSFGHAAFFGGAG 67

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y    L     L+  L +          G+++GL +++ +G Y A+ TL ++++F    +
Sbjct: 68  YVAGYLMRDLNLTPELGLIAGTAAGALIGLVVGLLAIRRQGIYFAMITLALAQMFYFFCL 127

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +    T G+ G+    R                     +  ++ +YY +L +  ++  +I
Sbjct: 128 QAP-FTGGEDGLQGVPR-------------GKLLGMLDLSSDLTLYYFVLAVVVVAFLLI 173

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           +    +      + I++N+    SL       KL AF +S+A  G+AGA         + 
Sbjct: 174 VRTIHSPFGQILKAIKENEPRAISLGYDTDRFKLLAFVLSAALSGLAGALKTLVLGFETL 233

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-FN 317
               ++ +  VI + ++GG+  LS      A++I +      +  +   +      +   
Sbjct: 234 TDVHWAMSGSVILMTLVGGLGILSGPILGAALVIALENKLGDLGAFLAGATGMDGFNVLG 293

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
              TT+      + +L     ++  
Sbjct: 294 ESVTTVTGAIFVICVLTFRRGIMGE 318


>gi|153950095|ref|YP_001401756.1| hydrophobic amino acid ABC transporter permease [Yersinia
           pseudotuberculosis IP 31758]
 gi|152961590|gb|ABS49051.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pseudotuberculosis IP 31758]
          Length = 358

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 60/344 (17%), Positives = 101/344 (29%), Gaps = 27/344 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  L V+  L L           Y  ++  +IL Y + A  L +V G  GLLSL   + +
Sbjct: 25  LIALIVLPFLALLPADHPLAISTYTLTLIGKILCYAVVAIALDLVWGYAGLLSLGHGLFF 84

Query: 75  AIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           A+G Y+  +                   W  +P     S      + L  L         
Sbjct: 85  ALGGYAMGMYLMRQAAGDGLPAFMSFLSWSELPWFWSGSQYFVWALCLIVLVPGLLAFLF 144

Query: 125 ATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                    +     ++       G    +  +  +              FP S     I
Sbjct: 145 GYFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTMLGFPVSATSTRI 204

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            ++   L +   S ++ L L RT        +RD +             KL  + +S+  
Sbjct: 205 ALFLATLALLIASLALGLALARTKFGRVLTAVRDAENRLMFCGYDPKGFKLFVWTLSAVL 264

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
             +AGA +      I+P     + +I     V LGG  +L        I+ G        
Sbjct: 265 CALAGALYVPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGIVNGAKSW---- 320

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                     F  +        + +   LV L     ++ L   
Sbjct: 321 ----------FTMAMPEYWQFFLGLIFILVTLFLPKGVIGLLRR 354


>gi|134299577|ref|YP_001113073.1| inner-membrane translocator [Desulfotomaculum reducens MI-1]
 gi|134052277|gb|ABO50248.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Desulfotomaculum reducens MI-1]
          Length = 290

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 94/304 (30%), Gaps = 25/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G + L++      Y +GA+  V++ + +   +   +  
Sbjct: 6   LLNGITLGATYALIALGYTMVYGIIQLINFAHGEIYMVGAFVGVLMVTVFQQGLAASLVA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+ +   + +       +A LI +      L        G            
Sbjct: 66  AMLTCMVIGVSIERIAYRPLRRSTRLAPLISAIGVSIFLQTLMTKLKGPQ---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I    +  + +        +L+    L A +   ++   I  A R   ++  
Sbjct: 116 -PVGFPHVIEDAIYKFASIEISKVQIIILVLSSLLMAGLHFIVKYVKIGKAMRAASEDYD 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       FA+ SA     G       + +SP M   +  +      +LGG+
Sbjct: 175 TAALMGINVNRVISFTFAIGSALAAAGGVLVGIYFNSVSPLM-GVTVGLKAFCAAVLGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L     L                  F++    +    L +V+L R   
Sbjct: 234 GSIPGAMLGGLFLGVAETL-------------GVAGGFDLYKDAIAFTLLIVVLLFRPTG 280

Query: 339 LLRL 342
           LL  
Sbjct: 281 LLGR 284


>gi|319795283|ref|YP_004156923.1| urea ABC transporter permease urtc [Variovorax paradoxus EPS]
 gi|315597746|gb|ADU38812.1| urea ABC transporter, permease protein UrtC [Variovorax paradoxus
           EPS]
          Length = 411

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/355 (13%), Positives = 97/355 (27%), Gaps = 37/355 (10%)

Query: 11  YDKILCLLAVVYPLLLFLFLG-----ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +      L VV  +   L +            Y  ++  +I+ Y + A  + ++ G  G+
Sbjct: 20  WTAFFVALIVVCAVAPVLNIWVPADSPLHMSDYAVALVGKIMCYAICALAMDLIWGYTGI 79

Query: 66  LSLNCVIAYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIM 110
           LSL   + +A+G Y   +                        W  +P     S +    +
Sbjct: 80  LSLGHGLFFALGGYMMGMYLMRQIGRDGNYKSDLPDFMVFLDWKTLPWHWTFSDSFIATL 139

Query: 111 GLPSLKFRGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
            L                           +I            +  +  +          
Sbjct: 140 ILIVAVPGLIAFVFGFFAFRSRIKGVYFSIITQAMTFAAMLLFFRNETGFGGNNGFTDFK 199

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
           R    P +     + ++ +             WL  +      + IRD +          
Sbjct: 200 RILNIPIATQEMRMTLFALTGLTLLGFFLFAKWLIGSKFGRVLQAIRDAETRVMFSGYNP 259

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
           +  KL+ + +S+   G+AGA +      I+P     + +I +     +GG  SL      
Sbjct: 260 LPYKLTIWVISAVMCGVAGALYVPQVGIINPGEMSAANSIEIAIWAAVGGRASLIGPIIG 319

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             I+ G                     ++       +      V L   + ++ L
Sbjct: 320 AFIVNGAKSWLT--------------VAYPEYWLYFLGALFIAVTLFLPNGIVGL 360


>gi|62870128|gb|AAY18215.1| HmgE [Pseudomonas putida]
          Length = 312

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 99/307 (32%), Gaps = 9/307 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   IY + A G ++V G +GL++        IGA   + + +    + +    +
Sbjct: 12  VLNGLVLGSIYALVALGYTMVYGIIGLINFAHGEVVMIGAMVTISVLTMLAGAGFAPGII 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++     ++ +   +    Y          +   IL     I      + +  R   
Sbjct: 72  TLLLAIMAAAVVCMLLAQGMEKYAYRPLRKAPRLTPLILAIGISIALQNLAMMIWGR--- 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T   ++                  ++L    +   + L + +T +  A R    NQ+
Sbjct: 129 GYKTFPEVVETRPVDVFGATVTNVQLSIMLVAVVIMLGLWLLVDKTRLGKAMRATAQNQE 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   I     + F + ++   +AG   A +  +    M      +   S  +LGG+
Sbjct: 189 VAGLMGININRVISATFLIGASLGAIAGVMRAINYGQADAYM-GLLLGLKAFSAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L  +  L  G         L                 L LV+L R + 
Sbjct: 248 GNLFGAMAGGLLLGLIESLAAGYTGQLTGGFLG-----ANYQDIFAFAVLILVLLFRPNG 302

Query: 339 LLRLRTP 345
           LL  R  
Sbjct: 303 LLGERQA 309


>gi|206562128|ref|YP_002232891.1| putative branched-chain amino acid transporter [Burkholderia
           cenocepacia J2315]
 gi|198038168|emb|CAR54119.1| putative branched-chain amino acid transporter [Burkholderia
           cenocepacia J2315]
          Length = 357

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/296 (16%), Positives = 104/296 (35%), Gaps = 12/296 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +   + +++   +       Y  ++    L+  + A    ++ G  G+L+L     + IG
Sbjct: 26  VMTGFAIVVAGAILPLVVGAYELTVIRDALVLAILALSYDLLWGRAGVLTLGHTTFFGIG 85

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMI--MGLPSLKFRGDYLAIATLIMSEIFQN 135
           AY + +   ++G +  +        +     +    L     R  + AI ++ +  I Q 
Sbjct: 86  AYGFAVTTVQFGQTPLVGFLAGLACAAVAAAVLGYFLLYAGVRLHFFAILSMAVLIIAQQ 145

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +   W+ +T G  G+     L F                  +   +  +Y +  +     
Sbjct: 146 LATSWQSVTGGDTGLLGIPGLSFQLAGHT----------LDLSGPVASWYAVATILVALL 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++  L R+        I  N+    +      +  L  F  S+    +AG   AA+   
Sbjct: 196 GVVWLLCRSRYGKVLAAISTNEWRALACGYHTSWHLLLMFTASAVLAAVAGCLMAATAGV 255

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           ++PD+F       VI  V +GG  SL     A   L  +      ++  ++  +L 
Sbjct: 256 VAPDVFSPVLATEVILWVAIGGRGSLGGPVLAAVGLTLLKHGASSLSTQWWPLILG 311


>gi|126731556|ref|ZP_01747362.1| ABC transporter permease protein [Sagittula stellata E-37]
 gi|126708092|gb|EBA07152.1| ABC transporter permease protein [Sagittula stellata E-37]
          Length = 327

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 58/314 (18%), Positives = 112/314 (35%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              +AV+  L+          + +  ++  + +I  + A GL+I +G  GL+SL   + +
Sbjct: 6   WLNIAVLLALVAVPGWALVADEPFTITLATRAVILALAAAGLNIALGVGGLVSLGHAVFF 65

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G Y+  IL         +     ++       ++ L +L   G       L+      
Sbjct: 66  GLGGYAMGILAFHAQSYAPMEFFGVSVPGTKAMPVIWLVALVVSGLAAFFIGLLALRTSG 125

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              I            +      + G    S+     FP    +  I  Y + L +    
Sbjct: 126 VYFIMITLAFGQMFYFFSISWAAYGGEDGVSIYVRNGFPGLNTLVPIQFYGLCLVVLLAV 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++   L R+    A    R   +   ++    +  +L+AF +S A  G+AGA FA    
Sbjct: 186 LALTAALMRSPFGLALNAARQAPERVRAVGLDPVRLRLAAFTLSGAVTGLAGALFADLNR 245

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            +SP MF +  +   I  +ILGG   L       AI + +      ++ Y+         
Sbjct: 246 FVSPSMFSWQLSGEFIVFIILGGTARLFGPVIGAAIFVLMEHWLGQLSEYWHIWFGLLLL 305

Query: 315 SFNMRHTTLMVIAL 328
           +  +     ++  L
Sbjct: 306 AVTLWGQGGVIGLL 319


>gi|296101745|ref|YP_003611891.1| branched-chain amino acid transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295056204|gb|ADF60942.1| branched-chain amino acid transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 304

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 88/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P+
Sbjct: 9   LINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIGLALLSFFGLQSFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLVFTIVVTGVYGWTIERIAYKPLRNSTRLAPLISAIGMSLILQNYAQLSQGPRQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+   +        FV       ++L+        +   +  T +    R ++ ++K
Sbjct: 129 GVPTMLDGVIRLHLGEGFVQITYTKVFILVASFAGMLLLTWIISHTRLGRMCRAVQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A  G+AG     +       +  F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISLVFVIGAAMAGLAGVLITMNYGTFDFYV-GFVIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL        GM    +  +  F               L ++++ R   
Sbjct: 248 GSLPGAMLGGLILGVAEAQFSGMVNSDYKDVFSFG-------------LLVMILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|91782150|ref|YP_557356.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|296162011|ref|ZP_06844810.1| urea ABC transporter, permease protein UrtC [Burkholderia sp.
           Ch1-1]
 gi|91686104|gb|ABE29304.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia xenovorans LB400]
 gi|295887755|gb|EFG67574.1| urea ABC transporter, permease protein UrtC [Burkholderia sp.
           Ch1-1]
          Length = 393

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 51/349 (14%), Positives = 102/349 (29%), Gaps = 32/349 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             I+  L V +  L+     A     Y  ++  + + Y + A  L +V G  G+LSL   
Sbjct: 48  LIIVFGLGVPFATLVVPETSALHLSAYAMTITGKFMCYAIAALALDLVWGYCGILSLGHA 107

Query: 72  IAYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLP 113
           + +A+G Y+  +                                      G   +++ L 
Sbjct: 108 LFFALGGYAIGMYLMRAIGHEGKYGSDLPDFMVFLDWHQLPWYWQGTQHLGYALLLVVLV 167

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
                  +         +     +I            Y  +  +          R   FP
Sbjct: 168 PAVVAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIGGFP 227

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
            +       +  +   +  L+      +  + +      +RD +     L  + +  KL 
Sbjct: 228 ITHPGTRTALLLITFAVLILAFLGARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLF 287

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            + VS+   G+AGA +      I+P       +I +   V +GG  +L         + G
Sbjct: 288 VWTVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIIGAFAVNG 347

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                             F  +F       + +   LV L   + ++ L
Sbjct: 348 AKSF--------------FTANFPEYWLFFLGLIFVLVPLFLPNGIMGL 382


>gi|148255158|ref|YP_001239743.1| hypothetical protein BBta_3759 [Bradyrhizobium sp. BTAi1]
 gi|146407331|gb|ABQ35837.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 322

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 108/301 (35%), Gaps = 22/301 (7%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
              +     +  ++A +  ++ F  L             +Q L + + A   ++++G  G
Sbjct: 13  PRAMRDEMIVFVIMAALLAIVPFTGLYPFF--------VMQALCFALLACAFNLLIGYGG 64

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           LLS    +      Y        +GL   L I      +    ++ G  S++ +G Y ++
Sbjct: 65  LLSFGHAMFLGTAGYCSAHALKVWGLPPELGILTGIAGAFVLSVVTGYISIRRQGIYFSM 124

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL +S++   + ++                       ++ + +   F    +     +Y
Sbjct: 125 ITLALSQLLYFVYLQ--------------TPFTHGEDGIQGIPQGRLFGFIDLSKPTTLY 170

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           YV+L        +I     +      + IR+N++   SL       KL A+ +S    G 
Sbjct: 171 YVVLVGFLAGFLLIFRTINSPFGEVLKAIRENEQRAISLGYKTDQYKLLAYILSGTIAGF 230

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA         S     +S +  ++ + ++GG+ ++        ++I + +   G   +
Sbjct: 231 AGALKVFVAQNASLTDVHWSMSGEIVLMTLVGGLGTVFGPVVGAFVIIAMQQYLAGFGQW 290

Query: 305 Y 305
            
Sbjct: 291 V 291


>gi|312622383|ref|YP_004023996.1| inner-membrane translocator [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312202850|gb|ADQ46177.1| inner-membrane translocator [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 312

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 73/338 (21%), Positives = 135/338 (39%), Gaps = 42/338 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K   +  +  +V  L++ L +       YI      I++ ++ A  L+++ G  G  S
Sbjct: 1   MKKRLLVYSVFIIVLYLIIMLLIKIGIIDDYIKLNLFLIMLNIILAVSLNLINGITGQFS 60

Query: 68  LNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           L      AIGAY+   +      +  +L + +  + +  CG+I+GLP L+ RGDYLAIAT
Sbjct: 61  LGHAGFMAIGAYTTAVLTTLEKPVPFYLTVLIGGLFAMICGLIIGLPVLRLRGDYLAIAT 120

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + I+     +  G +GI    +                               
Sbjct: 121 LGFGEIIRVIIQNIDYL-GGASGISDIPQGIDWTGYF----------------------- 156

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
              +  LS  +IL +  ++   A   IR+++ A  ++       K+ AF + + F G+AG
Sbjct: 157 --VITVLSVVVILNIINSSFGRAMIAIREDEIAAEAMGINTTLYKVLAFMIGAFFAGVAG 214

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           + ++ S   I PDMF F ++I ++ IV+               +          ++    
Sbjct: 215 SIYSGSFGFIQPDMFNFFKSIDILVIVV---------------LGGLGSISGSIISAIVL 259

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             +      +      L  I L +++L R   L+  + 
Sbjct: 260 TIISALLQDYPAVRMVLYSIILIIIMLFRPQGLMGTKE 297


>gi|326318178|ref|YP_004235850.1| urea ABC transporter permease UrtC [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323375014|gb|ADX47283.1| urea ABC transporter, permease protein UrtC [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 385

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/349 (13%), Positives = 100/349 (28%), Gaps = 33/349 (9%)

Query: 13  KILCLLAVVYPL-LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            ++ + AV   L LL     A     Y  ++  +I+ Y + A  + ++ G  G+LSL   
Sbjct: 27  ALIAVCAVAPALNLLVPAGSAFHLSDYAVALLGKIMCYAICALAMDLIWGYTGILSLGHG 86

Query: 72  IAYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
           + +A+G Y   +                        W  +P    +S +    + L    
Sbjct: 87  LFFALGGYVMGMYLMRQIGRDGNYKSDLPDFMVFLDWKDLPWHWALSDSFVATLVLVVAV 146

Query: 117 FRGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
                                  +I            +  +  +          R    P
Sbjct: 147 PGLVAFVFGYFAFRSRIKGVYFSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGQP 206

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
            +     + ++ +          +  WL  +      + IRD +        + +  KL+
Sbjct: 207 IATQNMRMLLFVLTGLALLGFFLLGRWLVGSKFGRVLQAIRDAETRVMFSGYSPLPYKLA 266

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            + +S+   G+AGA +      I+P     + +I +     +GG  +L+       I+ G
Sbjct: 267 IWTISAMMCGVAGALYVPQVGIINPGEMSAANSIEIAVWAAVGGRATLAGPIAGAFIVNG 326

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                                +        +      V L     +  L
Sbjct: 327 AKSWLT--------------VTAPEFWLYFLGALFIAVTLFLPQGVAGL 361


>gi|239977855|ref|ZP_04700379.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces albus J1074]
          Length = 666

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 112/326 (34%), Gaps = 26/326 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
            A +  L + L         Y  S+    L   + A  ++++ G  GL +L     +A+G
Sbjct: 328 AAPLLVLCVALVALPGLLDAYTISLAGSALALGLLAVSVTVLTGYAGLPTLGQTAPFAVG 387

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+   L +       + I +SA+ +     + G   ++ RG  + + TL + E+    +
Sbjct: 388 AYTTANLAAAGWTVGPVQILLSALAAAVFSAVTGPAVIRARGTTVLMITLAVGELTSAAV 447

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            + K +T G  G+        L            +    +  E  +Y   L +  ++ + 
Sbjct: 448 NQLKSVTGGADGLVGFPATQAL------------WGGEDLFEESELYTYALVVAAVAVAA 495

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L + R+         R  +    +    +    L A+  + A  G+ G+     +  +S
Sbjct: 496 TLLVLRSPAGKLLTGARGAEARMRASGHPVWRYLLVAYIGAGALAGVGGSVMVTVQQYLS 555

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P    F      +   ++GG TS+        +++   +   G    +            
Sbjct: 556 PADVGFEIAAFALLAAVIGGTTSVVGALFGAGLIVATRDWVAGAWPGHGP---------- 605

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLR 343
                L+ +     + +    L  LR
Sbjct: 606 ----LLLGVLFVAAVYLLPRGLAGLR 627


>gi|241765514|ref|ZP_04763477.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
 gi|241364698|gb|EER59717.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
          Length = 321

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 59/322 (18%), Positives = 115/322 (35%), Gaps = 28/322 (8%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            +  + L L         Y  ++     I+ +   GL+++ G  G  +L      A+GAY
Sbjct: 10  WLLLVALGLAFPLFTGNDYHLTVMSTAYIFAIATIGLNLITGYTGQFNLAHSGFMAVGAY 69

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  IL   +  S W    +S  +S   G  +G+ SL+ +G Y +I TL +  I   ++ K
Sbjct: 70  TVGILTVDHQFSFWAAFALSGAVSVVLGYFLGILSLRLKGHYFSIFTLCVGYIMFLVIEK 129

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W  +T+G  GI                       S      + +YY++     L    + 
Sbjct: 130 WDGLTHGTVGIMGIPAPEP-------------IGSLRFDTPLALYYLVFFWLVLGMWAMR 176

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  + +   +  IR++ +   +L   ++  K  AF +S  + GMAG  +A     I P 
Sbjct: 177 RIVNSLLGRTFVAIRNSDELAEALGINLMRNKTLAFMLSVFYAGMAGGLYAGFVRFIGPG 236

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +        +   +I+                     L   +       L ++       
Sbjct: 237 VAGVEHTFDMTMYMIV---------------GGLGTLLGPLLGALAVPWLTQYLQFLQEY 281

Query: 320 HTTLMVIALFLVILMRSHSLLR 341
              +    L L+++   H ++ 
Sbjct: 282 RFIVFGPILVLLVIFVPHGIVG 303


>gi|86748864|ref|YP_485360.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86571892|gb|ABD06449.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 336

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 65/308 (21%), Positives = 124/308 (40%), Gaps = 26/308 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               ++ ++      +LIY +    L+I+ G  G  SL     YA+GAY+  IL   +G+
Sbjct: 38  APLIAKNFVIFQMTMVLIYAIAVLALNILTGGSGQFSLGQSAFYALGAYTSAILMEVFGV 97

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           +  L +PV+  I    G + GLP+L+  G YLA+AT  ++     +L             
Sbjct: 98  NYALTLPVAGGICFIAGYLFGLPALRLSGIYLALATFALATAMPQLL------------K 145

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                 +  G     + +        +  ++++YY +L +        + L ++    A 
Sbjct: 146 LHYFEAWTGGVQGLVITKPDAPFGLPLSQDMWLYYFVLVVSMAIYVASVNLLKSRSGRAM 205

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             IRDN+ A  ++   +   K  AF VS+   G+AG   A +   ++PD +     I + 
Sbjct: 206 MAIRDNEIAASAMGVDVALYKTLAFGVSAGITGVAGGLGAIAVQFVAPDSYTIQLAIALF 265

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
             +++GG+  L       A ++ V  +    +     +              +  + L L
Sbjct: 266 LGMVVGGVGWLPGSIVGAAFIVFVPNIAEHFSKGLSGA--------------VFGLILVL 311

Query: 331 VILMRSHS 338
           +I +  H 
Sbjct: 312 IIFVLPHG 319


>gi|327192980|gb|EGE59895.1| putative branched-chain amino acid ABC transporter, permease
           protein [Rhizobium etli CNPAF512]
          Length = 333

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 59/344 (17%), Positives = 122/344 (35%), Gaps = 28/344 (8%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           ++   I C LA +  ++    +G       + ++  +++   +    L +V G  G+ +L
Sbjct: 14  HRRGFISCDLAGITIIIAVAAVGYFAFPDNL-ALLTRMITIALLVLSLDLVTGYCGVATL 72

Query: 69  NCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                +  GAY+  IL + Y      L++        A G++ G   L+  G    + ++
Sbjct: 73  GHAALFGSGAYAAGILSAHYGVNDPLLMLLAGIAGGAASGLLSGAIILRAHGLPQLVLSI 132

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +  +F     K    T G  G+         G               F +Y    ++  
Sbjct: 133 ALIHLFHEFANKASSWTGGSDGLSGIAPDPIFGL------------FEFDLYGQTAFFFG 180

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  +  +++  L R+      R IR +     ++  +   A +  + +S A  G+ GA
Sbjct: 181 TALLLVVFALLRLLVRSPFGMLCRGIRQDPLRIRAMGGSPKAALIRMYVMSGAVAGVGGA 240

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A S   +  D   F+++   + +++LGG  SL      T I +   +     N +++ 
Sbjct: 241 LNAISTQVVGLDSLSFTQSAEALVMLVLGGTGSLFGALSGTIIFMLFEDYVSAANPFHW- 299

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                         T++   L  V+L     L           R
Sbjct: 300 -------------LTMVGALLIAVVLFAPKGLYGTAAALIVRRR 330


>gi|296536413|ref|ZP_06898513.1| urea ABC superfamily ATP binding cassette transporter, membrane
           protein [Roseomonas cervicalis ATCC 49957]
 gi|296263263|gb|EFH09788.1| urea ABC superfamily ATP binding cassette transporter, membrane
           protein [Roseomonas cervicalis ATCC 49957]
          Length = 518

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/291 (12%), Positives = 86/291 (29%), Gaps = 18/291 (6%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           +  G +G++++       +GAY+ V++         L      +   A  ++     +  
Sbjct: 245 VTFGVMGVINMAHGEMVMLGAYTTVVVQEALRGIPALAPLSLPLSVPAAFLVTAAIGVAL 304

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L+ +      +  + +            + ++        +
Sbjct: 305 ERG---LIRHLYGRPLETLLMTFGVGMILQQSVRLIFGAQNREVVSPAWMQGTLILPFGI 361

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                  +++     +    +  +R T      R +  N++   ++           FA 
Sbjct: 362 EVTQNRLWIIFFSLVVLGLTVAAIRFTRFGLEMRAVVQNRRIAATMGIRTGRVDAMTFAF 421

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   GMAG   A S+             I    +V+ GG+ SL+        L  V ++
Sbjct: 422 GSGIAGMAGV--ALSQIDNVSPNLGTGYIIDSFMVVVFGGVGSLAGTMIGAFTLGIVNKM 479

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   L  L+  +  
Sbjct: 480 LEPWAGAVLAK-------------IAVLVGIMLFIQRRPKGLFALKGRAAE 517


>gi|121595666|ref|YP_987562.1| inner-membrane translocator [Acidovorax sp. JS42]
 gi|222111883|ref|YP_002554147.1| inner-membrane translocator [Acidovorax ebreus TPSY]
 gi|120607746|gb|ABM43486.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidovorax sp. JS42]
 gi|221731327|gb|ACM34147.1| inner-membrane translocator [Acidovorax ebreus TPSY]
          Length = 309

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 98/305 (32%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G + L++        +GA +          ++      
Sbjct: 8   IINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMVGALTSWSCIGLMQEAMPGAPGW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++       +    L F  + +A   L  S     ++         +    +  +  +
Sbjct: 68  LILLLATLIACVVAAVLNFTIEKVAYRPLRNSPRLAPLITAIGMSILLQTLAMIIWKPNY 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+    F     +       +L       AS++  +  T +  A R   +N +
Sbjct: 128 --KPYPTLLPTQPFQVGGAVITTTQVLILGVTVVALASMVYLVNYTRLGRAMRATAENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + F + +    +AG  +A++       M  F   +   +  + GG+
Sbjct: 186 VAALMGVKPDMVISATFIIGAVLAAIAGIMWASNYGTAQHTM-GFLPGLKAFTAAVFGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  +  G        +L      +        I L +++ +R   
Sbjct: 245 GNLAGAVVGGLLLGLIEAIGSGYIGTLTGGVLG-----SHYTDIFAFIVLIIILTLRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|16119763|ref|NP_396469.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15162357|gb|AAK90910.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 379

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/354 (12%), Positives = 99/354 (27%), Gaps = 42/354 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A     +  +F       ++  +   + L+Y M    +++  G  G+L+L   + + +G
Sbjct: 9   IAAYVLFIAIIFAAPVFGDEFWLNRISKYLVYGMLGVAIALTWGYAGILNLGQGLFFGLG 68

Query: 78  AYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           AY   +                      +W   P +            L           
Sbjct: 69  AYMLAMSLKLSSLTSLQQGSDKPVPDFMLWNAEPGAPTELCCINKGSFLWLPFQSQSVGL 128

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVA----------------DRLYFLGTTVRSLI 167
           +  +++  +    L                                  +      +  L 
Sbjct: 129 VLGVLLPVLIAGALGMLVFRKRISGVFVSIITLALVLLVRLVVVDAQPVTNGFNGLTDLG 188

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                   F  Y    YY+      L+      +  T      + IRD+Q     L   +
Sbjct: 189 WLMVGGIEFDPYSRATYYLCAACLSLTLIGARLVVETRAGMILQAIRDDQVRARYLGFDV 248

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
              ++  F +S+   G+AG  +    +  SP     S ++ ++    +GG +SL      
Sbjct: 249 SLYQVFFFVISAGIAGVAGMLYVVVAEFASPTFMDLSFSVTMVVWAAVGGRSSLLGACIG 308

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             ++  +             + +    +       ++ +   LV+L     L  
Sbjct: 309 AILINMIE------------AEVSETEALVEAWKAIIGLIFVLVVLFMPRGLGG 350


>gi|119386975|ref|YP_918030.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119377570|gb|ABL72334.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 325

 Score = 88.0 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 108/264 (40%), Gaps = 14/264 (5%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           +  +ILI+ M     ++++G  GLLS    I + IG Y+  I  +R+ + + +++  +A+
Sbjct: 32  LATEILIFAMVVAACNLLLGYTGLLSFGQGIFFGIGTYAAGICLTRWQIPVPVVLASAAV 91

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           +  A   ++G  S++ +G Y  + TL  S++F  +   +  +T G  G+    R      
Sbjct: 92  LGAATATLVGWLSIRRQGVYFVMLTLAFSQLFYFVAYTFSGVTGGDNGLLGVPRPS---- 147

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                        + +      Y  +        +I++ + ++        IR+N+    
Sbjct: 148 ----------VGGTALNAPWSYYTYVAVCFVAVFAILVMVTQSTFGRTLLAIRENEGRAA 197

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           ++       KL AFA+S A     GA  A           ++  + +++ + I+GG +SL
Sbjct: 198 AIGFPTKLFKLEAFAISGAVTAFGGALHAMLIGVAPLSNIEYHTSELILIMTIIGGSSSL 257

Query: 282 SKIAKATAILIGVVELCCGMNFYY 305
                     + + +    +   +
Sbjct: 258 FGSVLGAGFYLLLADALSTVWPRW 281


>gi|282599983|ref|ZP_05972603.2| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Providencia rustigianii DSM 4541]
 gi|282567102|gb|EFB72637.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Providencia rustigianii DSM 4541]
          Length = 333

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 84/305 (27%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW-LLIP 97
             +       Y + A G ++V G +G+++      Y IG+Y   I  +   +    +   
Sbjct: 37  FLNGLTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIAIAGLMMLGIDVGWI 96

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           + A    A  ++                      I     I           +    R  
Sbjct: 97  LIAAAFIAAIVVSSSYGWSIERVAYRPVRHSKRLIALISAIGMSIFLQNYVSLSQGSRDL 156

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + +                      + +       ++ L++R + +  A R   ++ 
Sbjct: 157 ALPSLITGQWVLGESDGFEATISKMQLVIWIVTFLSMLALTLFIRYSRMGRACRACAEDL 216

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 217 KMASLLGINTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 275

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     +        +  ++ F               L  V+L+   
Sbjct: 276 IGSIPGAMLGGLILGVSEAMTSAYLSTEYKDVVSFG-------------LLIGVLLIMPT 322

Query: 338 SLLRL 342
            +L  
Sbjct: 323 GILGR 327


>gi|222529377|ref|YP_002573259.1| inner-membrane translocator [Caldicellulosiruptor bescii DSM 6725]
 gi|222456224|gb|ACM60486.1| inner-membrane translocator [Caldicellulosiruptor bescii DSM 6725]
          Length = 312

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 74/338 (21%), Positives = 135/338 (39%), Gaps = 42/338 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K   I  +  +V  L++ L +       YI      I++ ++ A  L+++ G  G  S
Sbjct: 1   MKKRLLIYSVFIIVLYLIITLLMKIGIIDDYIKLNLFLIMLNIILAVSLNLINGITGQFS 60

Query: 68  LNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           L      AIGAY+   +      +  +L + +  + +  CG+I+GLP L+ RGDYLAIAT
Sbjct: 61  LGHAGFMAIGAYTTAVLTTLEKPVPFYLTVLIGGLFAMICGLIIGLPVLRLRGDYLAIAT 120

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + I+     +  G +GI    +                               
Sbjct: 121 LGFGEIIRVIIQNIDYL-GGASGISDIPQGIDWTGYF----------------------- 156

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
              +  LS  +IL +  ++   A   IR+++ A  ++       K+ AF + + F G+AG
Sbjct: 157 --VITVLSVVVILNIINSSFGRAMIAIREDEIAAEAMGINTTLYKVLAFMIGAFFAGVAG 214

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           + ++ S   I PDMF F ++I ++ IV+               +          ++    
Sbjct: 215 SIYSGSFGFIQPDMFNFFKSIDILVIVV---------------LGGLGSISGSIISAIVL 259

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             +      +      L  I L +++L R   L+  + 
Sbjct: 260 TIISALLQDYPAVRMVLYSIILIIIMLFRPQGLMGTKE 297


>gi|254442160|ref|ZP_05055636.1| amino acid or sugar ABC transport system, permease protein
           [Verrucomicrobiae bacterium DG1235]
 gi|198256468|gb|EDY80776.1| amino acid or sugar ABC transport system, permease protein
           [Verrucomicrobiae bacterium DG1235]
          Length = 541

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 105/316 (33%), Gaps = 37/316 (11%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-----------YGLS 91
                + +M ++GL+I  G +G++++      AIG Y+  ++              +   
Sbjct: 250 LSTGSVLLMVSFGLAITFGLMGIINMAHGEFIAIGGYTCYVVQGYFSNWFGESSPAFQWF 309

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            W+ +PVS  ++G  G ++     +F       + L+ +     ++ +   +  G A + 
Sbjct: 310 FWVSLPVSFAVAGGIGFVLEKGFFRFLYKRPLES-LLATWGLSMVMRQAFRLKFGAANVQ 368

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           VA+            +    F  + +       + +    F+     L L +T +    R
Sbjct: 369 VANP----------DLLLGNFEYAGISMSYARLFAIAFAGFVCVLTWLLLTKTNLGLYIR 418

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +  N+    SL   +       FA       MAGA      +         +  +    
Sbjct: 419 AVMQNRNMASSLGIPVKRVNSMTFAFGCGLAAMAGAVLTQIGNV--GPTMGQAYIVDSFM 476

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +V++GG+ +L     +   +    +    +                     +++  + L 
Sbjct: 477 VVVVGGVGNLLGAGISAMGIGVFDQFLQPLFGPVMGK-------------IIVLGMIILF 523

Query: 332 ILMRSHSLLRLRTPSN 347
           +  +   +   ++ S 
Sbjct: 524 LQWKPGGIFPTKSRSM 539


>gi|330807292|ref|YP_004351754.1| amino acid ABC transporter permease [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327375400|gb|AEA66750.1| Putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 359

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 53/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
                 Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  PLHVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     + +    M L  L      L           + +     
Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDSFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  +       +++  + +   S  I 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFGITEPGTRAVLFFATVLLLVASLFIG 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WRLARSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGVVNGMKSW--------------FTVAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     +V L     ++ L
Sbjct: 329 YWLFFLGALFIVVTLYLPKGVIGL 352


>gi|269123242|ref|YP_003305819.1| inner-membrane translocator [Streptobacillus moniliformis DSM
           12112]
 gi|268314568|gb|ACZ00942.1| inner-membrane translocator [Streptobacillus moniliformis DSM
           12112]
          Length = 331

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 81/351 (23%), Positives = 150/351 (42%), Gaps = 49/351 (13%)

Query: 5   SLRLNKYDKILCLLAVVY-PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           SL+LNK + IL  L +++  L+L   +       Y  S+ I ILIY++FA  ++I  G +
Sbjct: 6   SLKLNKTNYILGFLMILFTYLILQYSIIDDGIFSYKASIYINILIYILFALSINITTGVM 65

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLK 116
           G L+L      +IGAYS  I               + ++    A+I+   GM++ + +L+
Sbjct: 66  GELNLGHAGFISIGAYSSSIFSKYLYSFNLNHLLHLVIVCIFGAIIASFFGMLVSMTTLR 125

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
            RGDYLAI TL   EI + I+     +                                 
Sbjct: 126 LRGDYLAIITLAFGEIVKYIIQNIDFLGGAA-----------------------GLNGIP 162

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
            I      ++++ +  +   +IL  ++        +IR+N+ A  ++   I  AK+  F 
Sbjct: 163 DIVNFSYIFLIVVISSILMIMILISKK---GRLLLSIRENEIAAENMGVNINRAKIYGFT 219

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           +S+ F G+ GA FA +   ++PD F F  +I ++ +V+LGG+ S++    +   L  + E
Sbjct: 220 LSAFFAGIGGALFAHNLGSLTPDKFNFVFSIEILVMVVLGGLGSITGAVVSATFLTLLNE 279

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
           +   ++ Y                  +  I L  +++ +   +L     + 
Sbjct: 280 ILRQVSEY---------------RFLIYSIILISLMIFKKDGILGTNEFTI 315


>gi|254500777|ref|ZP_05112928.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222436848|gb|EEE43527.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 360

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 59/329 (17%), Positives = 117/329 (35%), Gaps = 19/329 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L V   +++        + + +      IL  ++ A G +++ G  GL+S+       
Sbjct: 18  LFLGVAVVVVIVAAFAPFYASRSLIQDLFFILTMLVLAQGWNLLAGYAGLVSVGQQAFVG 77

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY+        GL   + I +  + +    +     + + +G Y AI T +++EI + 
Sbjct: 78  IGAYAMFSGVILLGLDPVVSILLGGIAAALLAIPAAFFTFRLQGAYFAIGTWVVAEIVRL 137

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           ++ +WK +  G        R           ++      +    ++  Y++ L +   + 
Sbjct: 138 LVAQWKMLGGGTG--TSLPRSASREMFGIEFLKDTFGFKTSAAADVVTYWLSLVLAVATI 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++ WL R+        +RDNQ    S+       K   +  ++   G+ GA     + R
Sbjct: 196 GVVYWLLRSRQGLGLAAVRDNQNTARSIGVDAQRIKAIVYLSTAFITGLVGALIYVQKAR 255

Query: 256 ISPDMFK--FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           ISPD           VI IV++GG+ ++        +   +     G   +Y   L    
Sbjct: 256 ISPDAAFSVLDWTAYVIFIVVIGGIGTIEGPIIGVLVFFALQNTLSGYGSWYLLVLGLLG 315

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                             +L     L  L
Sbjct: 316 IVI---------------MLFAPRGLWGL 329


>gi|160914596|ref|ZP_02076810.1| hypothetical protein EUBDOL_00603 [Eubacterium dolichum DSM 3991]
 gi|158433136|gb|EDP11425.1| hypothetical protein EUBDOL_00603 [Eubacterium dolichum DSM 3991]
          Length = 297

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/289 (15%), Positives = 94/289 (32%), Gaps = 12/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GAY   +  S++ L+ +L + V
Sbjct: 13  LINGLSIGSIYALIALGYTMVYGIIKLINFAHGDIYMLGAYVGFLAISQFHLNFFLALLV 72

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G+++   + K   +   IA LI +      L        G            
Sbjct: 73  AMAFCAVLGVVIERIAYKPLRNATRIAALITAIGVSYFLEYSTQKIMGP----------- 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T  + +    F    +  ++   Y+      L   +   +++T +  + R +  +  
Sbjct: 122 GVKTYPTTLSNEAFTIFGLHIQLQQIYIFAITIVLMLILTFVVKKTKVGRSMRAVSVDAD 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G  G       + I+P M      I      + GG+
Sbjct: 182 AAKLMGINVDATISYTFAIGSALAGAGGVLVGMYYNTINPLM-GMVPGIKAFVAAVFGGI 240

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             L         +  V  L        +   + +     +       + 
Sbjct: 241 GILPGAMFGGFFIGIVESLVTAYGSSLYKDAVVYAILILILIIKPAGLL 289


>gi|187925880|ref|YP_001897522.1| branched-chain amino acid ABC transporter inner membrane protein
           [Burkholderia phytofirmans PsJN]
 gi|187717074|gb|ACD18298.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
          Length = 323

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/302 (16%), Positives = 124/302 (41%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS    +  A   Y         G S  L +     
Sbjct: 26  FVMKVLCFALFAAAFNLLIGYTGLLSFGHAMFLASAGYVTGYAIQSLGFSPELGVLAGTA 85

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+I+G+ +++ +G Y A+ TL ++++   + ++                      
Sbjct: 86  AATLLGLIVGIFAIRRQGIYFAMVTLALAQMVYFVFLQA--------------PFTHGED 131

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  ++ +Y+V+L +  L+  +I+ +  +        I++N+    
Sbjct: 132 GLQGVPRGKLFGVLDLSSDVALYFVVLAVMVLAFLLIVRIVHSPFGQVLVAIKENEPRAV 191

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+   G+AG+     +   +     ++ + +VI + ++GGM +L
Sbjct: 192 SLGYDTDRFKLLAFILSAGIAGLAGSLKVLVQGFETLSDAYWTMSGLVILMTLVGGMGTL 251

Query: 282 SKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +    +       + +++  S     T +  +     +L     ++
Sbjct: 252 FGPLLGAALIVALEDRLGDIGGALATTTGVEWFRSLGESVTIVTGVIFIACVLAFRRGIV 311

Query: 341 RL 342
             
Sbjct: 312 GE 313


>gi|330969709|gb|EGH69775.1| inner-membrane translocator [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 359

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 99/324 (30%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
           + +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G+Y+  +        
Sbjct: 43  SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGSYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      M L  L      L           + +     
Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDHFLWAMCLVVLAPGLLALIFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  S       ++   + +   S  I 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISAQGTRAALFLATVALLVASLYIG 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTMAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     +V L     ++ +
Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGM 352


>gi|120609972|ref|YP_969650.1| inner-membrane translocator [Acidovorax citrulli AAC00-1]
 gi|120588436|gb|ABM31876.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 326

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 122/302 (40%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS          AY        +GL+  + + +   
Sbjct: 30  FVMKLLCFALFASAFNLLLGYTGLLSFGHAAFLGGAAYVTGHAIKVWGLTPEIGLVLGTA 89

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
                G++ G  +++ +G Y ++ TL ++++     ++    T G+ G+    R      
Sbjct: 90  GGALLGLLFGWLAIRRQGIYFSMITLALAQMLFFACLQAP-FTGGEDGLQGVPR------ 142

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F    +  ++ MYYV L +   +  +I+    +      + I++N+    
Sbjct: 143 -------GKLFGVLDLSSDVTMYYVALAVVVAAFLLIVRTIHSPFGQVLKGIKENEPRAI 195

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+A  G+AG+         +     ++ +  VI + ++GG+ +L
Sbjct: 196 SLGYDTQRFKLLAFVISAAIAGLAGSLKTLVLGFATLSDVHWTASGQVILMTLVGGLGTL 255

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           S     +A+++ +            + + + +  +     T +  +   + +L     ++
Sbjct: 256 SGPLVGSAVVVLLENKIGEFGNLLASLTGVDWFRTLGESVTIVTGLIFVVCVLAFRRGIM 315

Query: 341 RL 342
             
Sbjct: 316 GE 317


>gi|121606498|ref|YP_983827.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120595467|gb|ABM38906.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 358

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 79/345 (22%), Positives = 139/345 (40%), Gaps = 23/345 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +  ++      +   +     F+ +    S     S+ I ++I  + A G++I+VG
Sbjct: 18  QIFPITQDR------VAIGLMLAFAFIAVPLMASDYLYASILIPLVIMSLAAIGVNILVG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGD 120
             G +SL      A+GAY       R      +  + +  + + + G++ GLPSL+ +G 
Sbjct: 72  YCGQISLGSGAFMAVGAYGAYNFFVRIPGMPLIPTLILGGLCAMSFGILFGLPSLRVKGL 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL        + ++ K +TN  A   V              +   +     +   
Sbjct: 132 YLAVATLAAQFFSDWMFLRIKWLTNDSASGSV-------------SVTQLQVFGLPIQSP 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y   L +  + A +   L R AI   W  IRD   A   +    ++AKLSAFAVSS 
Sbjct: 179 VSKYLFCLAVLVIVALLAKNLVRGAIGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            IGMAGA +A        P  F    +  ++ +VI+GG+ S+       A ++ +     
Sbjct: 239 IIGMAGALWAFVHLGSWEPAAFSVEISFRLLFMVIIGGLGSIMGGFFGAAFIVVLPIALN 298

Query: 300 GMNFYY--FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                +     +       +     +    +   +++  H L RL
Sbjct: 299 RFLPAFMSLFGIEISTAGVSHAELMIFGGLIVWFLIVEPHGLARL 343


>gi|300696581|ref|YP_003747242.1| leucine/isoleucine/valine transporter permease subunit
           (transmembrane abc transporter) [Ralstonia solanacearum
           CFBP2957]
 gi|299073305|emb|CBJ52814.1| leucine/isoleucine/valine transporter permease subunit
           (transmembrane abc transporter) [Ralstonia solanacearum
           CFBP2957]
          Length = 299

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 57/302 (18%), Positives = 118/302 (39%), Gaps = 41/302 (13%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             ++ + + I  + A  + + + S GLL++       IGAY+  +L     +   + +  
Sbjct: 11  YSNLVLTLGINALLALSIYLTL-SCGLLAMANAAFMGIGAYTSALLTMNAEMPFPVALLG 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +      +++G P+L+  G YLA+ATL   E+ + +++  +  T G  G+    +L  
Sbjct: 70  GMLAPAVVAVVIGRPTLRLSGVYLAMATLGFGEVVRVLILNTENWTGGALGLNGIPQLTE 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                       +     L+  ++   RR+ +  A+  I++++ 
Sbjct: 130 WWH-------------------------VALAVALTLFVLARTRRSKVGRAFEAIKEDET 164

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +   KL AF + +   G+AGA  A     I P  F F   + ++++ ILGG 
Sbjct: 165 AAGLMGINVAGTKLLAFTLGAVIAGLAGALNAHLTFFIGPSEFGFDRGVEILTMTILGGT 224

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           + L+     + IL  + EL      +                  +  + L L++L     
Sbjct: 225 SGLTGPVLGSMILSLLPELLRAFKDF---------------RLVVNGLILMLIVLFLPKG 269

Query: 339 LL 340
           + 
Sbjct: 270 IW 271


>gi|304317546|ref|YP_003852691.1| inner-membrane translocator [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779048|gb|ADL69607.1| inner-membrane translocator [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 294

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 94/288 (32%), Gaps = 10/288 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GA++     + + L     + +
Sbjct: 8   LINGLSLGSIYALIALGYTMVYGIMKLINFAHGDIYMVGAFTGFFASTYFHLGFIPSLLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++S   G+ +   + +   D   I+ LI +     +L           G  +      
Sbjct: 68  AMLVSLILGVTIERVAYRPLRDKSKISILITAIGVSLLLEN---------GGIILLSPQV 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                      + F +  +        + +    +   + + + +T I  A R +  +  
Sbjct: 119 RTYPQIFKQHMYSFFNGIITISNQQIVIFVVSIIMMVGLQIIIYKTKIGKAMRAVSTDAD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA   +AG       + I P M      +      +LGG+
Sbjct: 179 AAKLMGVNVDRTVSFTFAIGSALAAVAGVLVGIYYNSIDPLM-GIMPGLKAFIAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             +        ++  +  L  G     +   + F     +       +
Sbjct: 238 GIIPGAMVGGLLMGVIEALVSGYGSSLYRDGVSFAILIIILLIKPTGL 285


>gi|226356447|ref|YP_002786187.1| branched-chain amino acid ABC transporter permease [Deinococcus
           deserti VCD115]
 gi|226318437|gb|ACO46433.1| putative branched-chain amino acid ABC transporter, permease
           component [Deinococcus deserti VCD115]
          Length = 340

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 70/334 (20%), Positives = 134/334 (40%), Gaps = 36/334 (10%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
           K+  L A     L+F FL     ++++  +G   L+  + A    I+    G +SL    
Sbjct: 35  KLWPLAAFFALALIFPFLPLGDKREFLLQIGFFTLVAGIMALSWDILA-RSGQVSLAHAA 93

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            Y +GAY+Y +L       +   +P++A+++G   +++G  +++  G Y AIATL  +E+
Sbjct: 94  FYGLGAYTYALLLKTGLPWL-AAMPLAALLAGLFSLVLGAVTMRLSGMYFAIATLAFTEV 152

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            + ++        G A   +   L                           Y + L +  
Sbjct: 153 IRTVIQNLPESVAGGANGMLVPAL-------------------LGGNSRGQYLLALSLLL 193

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L+  + L +R T + +A+  IR  ++    L  +I+  KL+AF +SS    +AG  +A  
Sbjct: 194 LTVGVSLAVRLTRLHHAFAAIRQGEETARVLGVSIVRYKLAAFFISSVLAALAGVLYAGK 253

Query: 253 RDRISP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
              I+P + F  + +I  ++  I GG+ +         +L    E+              
Sbjct: 254 TFFINPLETFSLANSIAPLTTSIFGGLYTTLGPVLGATVLRVAEEIL------------- 300

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
              +    +  +  + L L IL     L+ L   
Sbjct: 301 -HNNVKNGYLVVYGLVLMLSILWLPRGLMGLLRR 333


>gi|221068781|ref|ZP_03544886.1| inner-membrane translocator [Comamonas testosteroni KF-1]
 gi|220713804|gb|EED69172.1| inner-membrane translocator [Comamonas testosteroni KF-1]
          Length = 309

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 101/305 (33%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G + L++        +GA +          ++  L   
Sbjct: 8   IINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMVGALTSWSCIGLMQEAMPYLPGW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++  A    +   SL F  + +A   L  S     ++         +    +  +  +
Sbjct: 68  LMLLIAAIIACVVAASLNFVIEKVAYRPLRSSPRLAPLITAIGVSILLQTLAMIIWKPNY 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+    +     +       VL       A+++  +  T +  A R   +N +
Sbjct: 128 --KAYPTLLSSTPYEIGTAVITPTQILVLAVTAIALATLMYLVNYTRLGRAMRATAENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + F + +    +AG  +A++       M  F   +   +  + GG+
Sbjct: 186 VAALMGVKPDMVISATFIIGAVLAAIAGIMYASNYGTAHHTM-GFLPGLKAFTAAVFGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  +  G        +L      +        I L +++ +R   
Sbjct: 245 GNLAGAVVGGLLLGLIESIGSGYIGDLTGGVLG-----SQYTDIFAFIVLIIILTLRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|163745616|ref|ZP_02152976.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanibulbus indolifex HEL-45]
 gi|161382434|gb|EDQ06843.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanibulbus indolifex HEL-45]
          Length = 356

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 55/345 (15%), Positives = 123/345 (35%), Gaps = 11/345 (3%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + Y  I    AV+    L LF            +  +I I+++      +++G  G++S 
Sbjct: 5   STYGTIAVKTAVLQIAALLLFAPFLFQDVRALEVAARICIFIVLVASYDLLIGYTGIVSF 64

Query: 69  NCVIAYAIGAYSYVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
              + +  GAY   I          ++ L      ++S      +GL SL+ +  + A+ 
Sbjct: 65  AHTMFFGFGAYGAAISLREMGPGWDAVALGAVAGVLVSLIVATAVGLLSLRVKAIFFAMI 124

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIF 182
           TL  + +   +  +    T G+ GI               V    +  R     +  ++ 
Sbjct: 125 TLATASVALVLASQLSQFTGGEDGITYRAPDLFKTATKLMVDEDGKVVRLFGVKLNGKLA 184

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            YY +         ++L +    + +  + IR+N+    ++   ++  +   F +S+A  
Sbjct: 185 AYYFVFFTSLALFLLMLRVVAAPLGSVLKAIRENEARAEAIGYRVVAYRTFVFCLSAAVA 244

Query: 243 GMAGAFFAASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            +AG  +A       PD    F+  I ++ +V++GGM ++        +++        +
Sbjct: 245 SLAGTIYAVWLKYTGPDTTLSFAIMIDILLMVVIGGMGTMWGAVVGAVLMVMAQYYLRDL 304

Query: 302 ----NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                    +  L  +     R    + I   L++      +   
Sbjct: 305 MGAAAEATASLPLLPELLDPDRWLFWLGIIFILLVYFFPRGITGT 349


>gi|56421514|ref|YP_148832.1| branched-chain amino acid ABC transporter permease [Geobacillus
           kaustophilus HTA426]
 gi|56381356|dbj|BAD77264.1| branched-chain amino acid ABC transporter (permease) [Geobacillus
           kaustophilus HTA426]
          Length = 292

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 103/303 (33%), Gaps = 24/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      + +G++      +  G+  +  + +
Sbjct: 7   LVNGISLGSIYALIALGYTMVYGIVRLINFAHGDVFMVGSFVGFYAVTMLGVGFFPALLL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       GMI+   + K   +   IA LI +     ++        G            
Sbjct: 67  AMASCAVLGMIIERIAYKPLRNAARIAVLITAIGVSLLIEYVTIYLRGAQ---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+         V+      ++L     L   +   + RT I  A R +  + +
Sbjct: 117 PEAYPSTLLPDRNLKLFGVVISSQSLFILGTSLVLMILLQFIVHRTKIGKAMRAVSHDAE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +     + FA+ SA  G AG  F     +I P M      +      +LGG+
Sbjct: 177 AARLMGINVDNTISATFAIGSALAGAAGVIFGIYYTKIEPLM-GILPGLKAFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        +L  +  L  G+ +  +   + F             + L L+++ R   
Sbjct: 236 GIIPGAMVGGLLLGVIESLVSGLGYSLWRDGVAF-------------VILILILIFRPAG 282

Query: 339 LLR 341
           L  
Sbjct: 283 LFG 285


>gi|84502255|ref|ZP_01000403.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
 gi|84389615|gb|EAQ02334.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
          Length = 355

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 57/340 (16%), Positives = 123/340 (36%), Gaps = 11/340 (3%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   L V+    L LF            +  +I I+V+      +++G  G++S    + 
Sbjct: 8   IAVKLVVLGIGALLLFAPFLFQDVRSLEVAARICIFVVLVASYDLLIGYTGIVSFAHTMF 67

Query: 74  YAIGAYSYVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           +  GAY   I           + L       +S    + +GL SL+ +  + A+ TL  +
Sbjct: 68  FGFGAYGAAILLKAMGPGWTPVILGALAGVAVSLVFAVAIGLLSLRVKAIFFAMITLAAA 127

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTT---VRSLIRFFRFPSSFVIYEIFMYYVL 187
            +   ++ +   +T G+ GI       F   T     +  +  R     +  ++  YY +
Sbjct: 128 SVVLVLVSQLSQLTGGEDGITYRAPDVFKPATKILTDADGKVLRIFDVRINGKLAAYYFV 187

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                +   ++L    + +    + IR+N+    ++   ++  +   F +S+ F  +AG 
Sbjct: 188 FFTSLIMFLMLLRFVGSPLGTVLKAIRENEGRAEAIGYRVVAYRTFVFCLSAVFASLAGT 247

Query: 248 FFAASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
            +A       PD    F+  I ++ +V++GGM ++        ++I        +     
Sbjct: 248 VYAVWLKYTGPDTALSFAIMIDILLMVVIGGMGTMWGAVIGAVLMIMAQYYLRDLMGAAS 307

Query: 307 NSLLKFD----CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +L             R    + I   L++      +   
Sbjct: 308 EALHGLPVLPELLAPDRWLFWLGIIFILLVYFFPKGIAGT 347


>gi|50121074|ref|YP_050241.1| putative branched-chain amino acid transport system, permease
           [Pectobacterium atrosepticum SCRI1043]
 gi|49611600|emb|CAG75048.1| putative branched-chain amino acid transport system, permease
           component [Pectobacterium atrosepticum SCRI1043]
          Length = 366

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 95/324 (29%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
                 Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 50  PLAISTYTLTLIGKILCYAIVAVALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 109

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS---EIFQNILI 138
                      W  +P     +      + L  L                  +     ++
Sbjct: 110 EGMPAFMSFLSWTELPWFWAGTQYFVWALCLIVLVPGVLAFVFGWFAFRSKIKGVYFSIM 169

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                  G    +  +  +              FP +     I ++   + +   S  + 
Sbjct: 170 TQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPITATGTRIGLFIATVLLLTASLLVG 229

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 230 FALARSKFGRVLTAVRDAENRLMFCGYDPKGFKLFVWTLSAVLCGLAGALYVPQVGIINP 289

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        I+ G                  F  +F  
Sbjct: 290 SEMSPTNSIEAAIWVALGGRGTLIGPLLGAGIVNGAKSW--------------FTVAFPE 335

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                + +   LV L     ++ L
Sbjct: 336 YWLFFLGLMFILVTLFLPRGVIGL 359


>gi|67925780|ref|ZP_00519081.1| inner-membrane translocator [Crocosphaera watsonii WH 8501]
 gi|67852373|gb|EAM47831.1| inner-membrane translocator [Crocosphaera watsonii WH 8501]
          Length = 382

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 65/366 (17%), Positives = 133/366 (36%), Gaps = 63/366 (17%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
               +Y +FA GL++  G  GL++   V    +GAY+ V+L  +      + +   A+++
Sbjct: 21  TSAGVYGIFALGLNLQWGFTGLINFGVVGFMTLGAYTSVLLTRQG-FPFIVAVLAGAILA 79

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
              G+++GL +L+ R DYLAI T+ +SE+ + + +  + +TNG  G+        +  T+
Sbjct: 80  AILGLLIGLSTLRLREDYLAIVTIGVSELVRLVALNEEWLTNGALGLRQYPLPLNIEATL 139

Query: 164 RSLIRFFRFPSSFVIYEIFMYY------------------------------------VL 187
              +      +   +Y  +  Y                                    +L
Sbjct: 140 PIKLLLILVLTLLAVYAEWTLYKSLAFQWKQNKEIQGKSYQPRKPFSLIIWGVLATSLIL 199

Query: 188 LGMCFLSASIILWLRRTAISNAWRTI-----------------------RDNQKAFFSLN 224
           L     + ++  +  ++ +     ++                       R++++   +L 
Sbjct: 200 LAFITGTTALWFYTYKSGLMVLVLSVLAIIYASLEFLVHSPWGRILKAIREDEEVPRALG 259

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
             I+  KL +F +  A  G +GAFFA     I PD F+         IV+LGG  S +  
Sbjct: 260 KNILLYKLQSFMLGGAIAGTSGAFFAWQLTTIYPDKFEPLITFNTWIIVVLGGSGSNAGT 319

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                I      L   +        +            ++ + L ++++ R   +L  + 
Sbjct: 320 LLGAVIFWAYDSLTRFVLPQLQ---ILSPSQLGYFRIMVIGLILMVLMVWRPQGILGKKE 376

Query: 345 PSNFLE 350
                 
Sbjct: 377 ELTLGR 382


>gi|171318302|ref|ZP_02907462.1| urea ABC transporter, permease protein UrtC [Burkholderia ambifaria
           MEX-5]
 gi|171096504|gb|EDT41401.1| urea ABC transporter, permease protein UrtC [Burkholderia ambifaria
           MEX-5]
          Length = 394

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 97/347 (27%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + V    L+     A     Y  ++G +++ Y + A  L +V G  G+LSL   + 
Sbjct: 51  IAIGVGVPLAALVAPESSAFHLSAYAMTLGGKLMCYAIAALALDLVWGYCGILSLGHGLF 110

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 111 FALGGYAIGMYLMREIGRDGKYGSDLPDFMVFLDWHQLPWYWSGTQHLAWALALVVLVPA 170

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            +  +  +          R   F  +
Sbjct: 171 VLAWVFGFFTFRSRVKGVYLSIITQALTFAAMLLFFRNETGFGGNNGFTDFKRIAGFAIT 230

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +  +      L+      +  + +      +RD +     L  + +  KL  +
Sbjct: 231 SPGTRTVLLLLTFATLVLAFIAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 290

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            +S+   G+AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 291 TLSAMLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 350

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                           F   F       + +   LV L+    ++ L
Sbjct: 351 SF--------------FTAHFAEYWLFFLGLIFVLVPLLLPRGIMGL 383


>gi|330960032|gb|EGH60292.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 359

 Score = 87.6 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 51/324 (15%), Positives = 96/324 (29%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
             +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  GFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMREAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      + L  L      L           + +     
Sbjct: 103 DGLPAFMTFLSWTELPWYWTGTDNFLWALCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  S       ++   + +      I 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRATLFLATVVLLVACLYIG 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WKLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVMCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     +V L     ++ L
Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGL 352


>gi|158314770|ref|YP_001507278.1| ABC transporter related [Frankia sp. EAN1pec]
 gi|158110175|gb|ABW12372.1| ABC transporter related [Frankia sp. EAN1pec]
          Length = 930

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 54/306 (17%), Positives = 117/306 (38%), Gaps = 19/306 (6%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  + ++  L L           +  ++G       +    L ++V + G +SL  V  
Sbjct: 310 LLAGVGLLVALGLVPSFAGIHLTDWTAALGT-----AIVFLSLGLLVRTSGQVSLCHVSF 364

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            AIGA ++  L   + L   + + V+ +I+   G ++ +P+++  G YLA+AT       
Sbjct: 365 MAIGAAAFSHLAVGHDLPWLVALLVTGLIAVPVGAMLAVPAVRLSGLYLALATFGFGIFL 424

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           Q +L     +           R +     V     F              YY++L M   
Sbjct: 425 QYMLYTQDYMFGSMGAGLSEPRPHLSWLNVEDDKGF--------------YYLVLVMAVA 470

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           + ++++ L R+ +    R + ++  A+ +   T+   ++  F VS+    + GA  A ++
Sbjct: 471 AVTLLVILDRSRLGRLLRGLAESPTAWETSGVTVSVTRVLVFCVSAFMAAVGGALTAVAQ 530

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             +S D ++   ++   ++VI+    +          L  +     G N      L    
Sbjct: 531 STVSADAYQPMLSLTYFAVVIVALGGNPWYALTGAGALELIPSYISGENTAAVLQLGFGL 590

Query: 314 CSFNMR 319
            +  + 
Sbjct: 591 AAVGVA 596



 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/290 (11%), Positives = 81/290 (27%), Gaps = 12/290 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            ++ +      +Y +   GL +   + G+ +       A+ AY +  L    G    + +
Sbjct: 6   PFLVAGLTTGAVYGLAGTGLVLTYKTSGVFNFAHGAVAALAAYVFYSLWVSQGWPWPVAV 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V+ + +G    ++     +F         +  +     ++     +  G          
Sbjct: 66  AVAVVAAGPVLGLVQELLARFIQGSSLALQVAATVGLLLVVQAVLVLVYGTLETRTVPIF 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G    +         +                 ++A + +  RR  +  A R + D+
Sbjct: 126 LGSGNVRLAGTNVRWADIAT----------FAFAVVVTAGLSVMFRRARLGLAMRAVVDD 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                   T+    +  A+ + +     +G  FA         +          + +   
Sbjct: 176 PALLDLAGTSPRQTRRFAWCIGATLAAASGVLFAPLLPLDVLQLTLLVVAAFGAAAIGA- 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             TSL        ++  +  L          + L     F +    L+V 
Sbjct: 235 -FTSLPLTFAGGLVIGVLASLATRYFTTGLLAGLPPALPFAVLFLVLLVF 283


>gi|209519226|ref|ZP_03268028.1| urea ABC transporter, permease protein UrtC [Burkholderia sp. H160]
 gi|209500306|gb|EEA00360.1| urea ABC transporter, permease protein UrtC [Burkholderia sp. H160]
          Length = 399

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/349 (14%), Positives = 102/349 (29%), Gaps = 32/349 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             ++  L V +  L+     A     Y  ++  + + Y + A  L +V G  G+LSL   
Sbjct: 55  LIVVFGLGVPFAALVIPETSALHLSAYAMTLTGKFMCYAIAALALDLVWGYCGILSLGHA 114

Query: 72  IAYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLP 113
           + +A+G Y+  +                                      G   +++ L 
Sbjct: 115 LFFALGGYAIGMYLMRAIGHDGKYGSDLPDFMVFLDWHQLPWYWHGTQHLGYALLLVVLV 174

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
                  +         +     +I            Y  +  +          R   FP
Sbjct: 175 PAVVAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIAGFP 234

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
            +       +  +   +   +      +  + +      +RD +     L  + +  KL 
Sbjct: 235 ITHQGTRAALLLITFAVLIAAFIGARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLF 294

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            + VS+   G+AGA +      I+P       +I +   V +GG  +L         + G
Sbjct: 295 VWTVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIIGAFAVNG 354

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                             F  +F       + +   LV L+  + ++ L
Sbjct: 355 AKSF--------------FTANFPEYWLFFLGLIFVLVPLLLPNGIMGL 389


>gi|291279057|ref|YP_003495892.1| branched-chain amino acid ABC transporter permease [Deferribacter
           desulfuricans SSM1]
 gi|290753759|dbj|BAI80136.1| branched-chain amino acid ABC transporter, permease [Deferribacter
           desulfuricans SSM1]
          Length = 315

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 74/327 (22%), Positives = 141/327 (43%), Gaps = 30/327 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L      ++FL +    +     ++G   +IY + A    IV+G  G+  +   + + +G
Sbjct: 7   LIGFLIFIIFLIVFPFMANSRWLAVGTTFIIYSIVALSQDIVLGRAGMFDMGHALFFGLG 66

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYS  IL + Y + +   IPV+ ++    G+++  P +  RGDYL + T+  + +F+ +L
Sbjct: 67  AYSTAILNTVYNVPVMWTIPVAVLLPMVFGVLLAAPIIHLRGDYLLVTTIGFNIVFEQVL 126

Query: 138 -IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                 IT G  GI+        G  + +                 +YY+   +  L+  
Sbjct: 127 KNNLFGITGGPNGIFGIGVPSIFGFQIMTQQ--------------SIYYMSFVVLMLTFF 172

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           II  L  + I  A   + ++  A   +     F +L AF + +A  G+AG  FA     +
Sbjct: 173 IIRNLETSKIGRALHYLNEDSLAAECVGINTRFYRLYAFGLGAALAGLAGVLFAVQYAAV 232

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP+ F F ++++  +IVI+GG +S+  I   T ++  + E+                  F
Sbjct: 233 SPEAFSFIQSVLFFTIVIVGGPSSIPGILIGTFVMFVLPEIFR---------------QF 277

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLR 343
                 +  IA+ L +++R   +   +
Sbjct: 278 ATARYFVFGIAMILTMILRPRGVWPAK 304


>gi|326316121|ref|YP_004233793.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323372957|gb|ADX45226.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 326

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 122/302 (40%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS          AY        +GL+  + + +   
Sbjct: 30  FVMKLLCFALFASAFNLLLGYTGLLSFGHAAFLGGAAYVAGHAIKVWGLTPEVGLLLGTA 89

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
                G++ G  +++ +G Y ++ TL ++++     ++    T G+ G+    R      
Sbjct: 90  GGALLGLLFGWLAIRRQGIYFSMITLALAQMLFFACLQAP-FTGGEDGLQGVPR------ 142

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F    +  ++ MYYV L +   +  +I+    +      + I++N+    
Sbjct: 143 -------GKLFGVLDLSSDVTMYYVALAVVVAAFLLIVRTIHSPFGQVLKGIKENEPRAI 195

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+A  G+AG+         +     ++ +  VI + ++GG+ +L
Sbjct: 196 SLGYDTQRFKLLAFVISAAIAGLAGSLKTLVLGFATLSDVHWTASGQVILMTLVGGLGTL 255

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           S     +A+++ +            + + + +  +     T +  +   + +L     ++
Sbjct: 256 SGPLVGSAVVVLLENKIGEFGNLLASLTGVDWFRTLGESVTIVTGLIFVVCVLAFRRGIM 315

Query: 341 RL 342
             
Sbjct: 316 GE 317


>gi|237654019|ref|YP_002890333.1| inner-membrane translocator [Thauera sp. MZ1T]
 gi|237625266|gb|ACR01956.1| inner-membrane translocator [Thauera sp. MZ1T]
          Length = 358

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 76/329 (23%), Positives = 125/329 (37%), Gaps = 17/329 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
                     L +     +    ++ I  L+  + A G++++VG  G ++L      AIG
Sbjct: 28  FVWGLIAFAALAVPMLADEYMFRAILIPFLVLSLAALGVNLLVGYCGQITLGAGAFMAIG 87

Query: 78  AYSYVILGSRYGLSIW-LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           AY+      R       L + +  + + A G++ G+PSL+ RG YLA+ATL    +    
Sbjct: 88  AYAAYNFMVRIDGMPLVLAMLLGGVSAAAFGILFGIPSLRVRGLYLAVATLAAQFLCDWA 147

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            ++    TN  +   V+     +   V                    Y   L      A 
Sbjct: 148 FLRIGWFTNHSSSGSVSVAKLEMLGWVIDSPTEK-------------YLFCLAFVIAFAF 194

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDR 255
           I   L R AI   W  IRD   A   +    +FAKLSAFAVSS F+G+AGA +       
Sbjct: 195 IAKNLTRAAIGRQWMAIRDMDVAAEVIGIRPMFAKLSAFAVSSFFVGVAGALWGFVHLGS 254

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY--FNSLLKFD 313
             P  F    +  ++ +VI+GGM S+       A ++ +                +    
Sbjct: 255 WEPAAFSVDRSFQLLFMVIIGGMGSIMGSFFGAAFIVILPIFLNQFLPLLGSLVGVTVST 314

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              +     +    +   +++  H L RL
Sbjct: 315 AGISHAELIIFGSLIIFFLIVEPHGLARL 343


>gi|107025706|ref|YP_623217.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054]
 gi|116693112|ref|YP_838645.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
 gi|105895080|gb|ABF78244.1| L-leucine ABC transporter membrane protein / L-valine ABC
           transporter membrane protein / L-isoleucine ABC
           transporter membrane protein [Burkholderia cenocepacia
           AU 1054]
 gi|116651112|gb|ABK11752.1| L-valine ABC transporter membrane protein / L-isoleucine ABC
           transporter membrane protein / L-leucine ABC transporter
           membrane protein [Burkholderia cenocepacia HI2424]
          Length = 319

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G S+V G +G+++      Y IGAY  ++  +           L
Sbjct: 23  LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGISAGYPLPL 82

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS +++G  G  +   + +       +  LI +      L  +  I  G    
Sbjct: 83  VLGAALIVSVIVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 139

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +             V        ++     L  ++ L++  + +  A 
Sbjct: 140 ----RDVSVPVLISGAFEIHLGGDYDVTIPYARLLIVCVTLVLMIALTLFISHSRMGRAC 195

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +    + G     +  +++P    F   I   
Sbjct: 196 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 254

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L        G     +  ++ F               L L
Sbjct: 255 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 301

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 302 ILLFRPTGLLG 312


>gi|51893334|ref|YP_076025.1| branched-chain amino acid ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
 gi|51857023|dbj|BAD41181.1| branched-chain amino acid ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
          Length = 339

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 57/332 (17%), Positives = 126/332 (37%), Gaps = 30/332 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
               +  L V+  L    FL      +Y+ S+ I   ++ +FA    +++G  G++S   
Sbjct: 16  RFGWILPLLVIAALYALPFLPGLGQNRYLLSLLIGAFVFAVFAMSFDLLLGYTGIVSFGH 75

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
            + +  G Y+  +L   +G+  W  + ++  I+    +++G  SL+ RG Y A+ ++  +
Sbjct: 76  ALFFGAGTYAAALLAKYHGVGFWASLALAPAIAAVLALVIGALSLRVRGVYFAMVSMAFA 135

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           E F+    K+  +T G  G+ V     +       +  +    +   +            
Sbjct: 136 EFFRVAAEKFSSVTGGSDGLSVQVAPDWAYGPRHRIELYLLTLTLAAVV----------- 184

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                  +  +  +        IR+N++   ++   +   KL A  ++ A   +AG  +A
Sbjct: 185 ----YLALRRIIHSPFGRVLVAIRENEQRAAAIGYNVFAFKLGAIVLAGAVAAVAGVMYA 240

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           A+ + + P +      I V+ + I+GG  +L   A    ++     L       +     
Sbjct: 241 ATENFVVPTVLSTETTINVLLMTIIGGAGTLGGPALGAGVVRLAGTLLSSYTDRW----- 295

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                        + +   L++L   H +  L
Sbjct: 296 ----------RLALGLLYALIVLFLPHGIAGL 317


>gi|148253469|ref|YP_001238054.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. BTAi1]
 gi|146405642|gb|ABQ34148.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 382

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 51/354 (14%), Positives = 102/354 (28%), Gaps = 42/354 (11%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+    ++ + L       +  +   + L++ M    +++  G  G+L+L   + +  GA
Sbjct: 10  AIYAAFIVLIMLVPLIMDSFWLNRLAKYLVFGMLGIAVALSWGYAGILNLGQGLFFGAGA 69

Query: 79  YSYVILGS--------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           Y   +                      +W   P +            L        +   
Sbjct: 70  YMLAMSLKLASSTSLQQGSDKPVPDFMLWNAEPGAKTELCCINKASFLWLPFQSQWFGVA 129

Query: 125 ATLIMSEIFQNIL----------------IKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
             LI+      +L                I    +   +  +  A  +      +  L  
Sbjct: 130 MGLILPVAIAFVLGSIVFRKRIAGVFVSIITLALVLLVRLVMIDAQPVTNGFNGLTDLGW 189

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
           F      F  Y +  YY++     +       L  T      + IRD+Q     L   + 
Sbjct: 190 FKLGGFEFDPYVVPTYYLIAVSLSVVLIAARLLVETRAGVILQAIRDDQNRARYLGFDVP 249

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
             +   FAVS+   G AG  +    +  SP     S +I ++    +GG  S+       
Sbjct: 250 AYQTFFFAVSALIAGFAGMLYVIVSEFASPTFMDLSFSITMVVWAAVGGRASILGACIGA 309

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            ++  +                     F      ++ +   LV+L     +  L
Sbjct: 310 ILINMISATVSE------------TEGFAEAWKAIIGLIFVLVVLYMPRGIAGL 351


>gi|312127556|ref|YP_003992430.1| inner-membrane translocator [Caldicellulosiruptor hydrothermalis
           108]
 gi|311777575|gb|ADQ07061.1| inner-membrane translocator [Caldicellulosiruptor hydrothermalis
           108]
          Length = 312

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 73/338 (21%), Positives = 134/338 (39%), Gaps = 42/338 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K   +     +V  L + L +       YI      I++ ++ A  L+++ G  G  S
Sbjct: 1   MKKRLLVYSAFIIVLYLTITLLMKIGIIDDYIKLNLFLIMLNIILAVSLNLINGITGQFS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           L      AIGAY+  +L +       +L + +  + +  CG+I+GLP L+ RGDYLAIAT
Sbjct: 61  LGHAGFMAIGAYTTAVLTTLEKPVPFYLTVLIGGLFAMICGLIIGLPVLRLRGDYLAIAT 120

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + I+     +  G +GI    +                               
Sbjct: 121 LGFGEIIRVIIQNIDYL-GGASGISDIPQGIDWTGYF----------------------- 156

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
              +  LS  +IL +  ++   A   IR+++ A  ++       K+ AF + + F G+AG
Sbjct: 157 --VITVLSVVVILNIINSSFGRAMIAIREDEIAAEAMGINTTLYKVLAFMIGAFFAGVAG 214

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           + ++ S   I PDMF F ++I ++ IV+               +          ++    
Sbjct: 215 SIYSGSFGFIQPDMFNFFKSIDILVIVV---------------LGGLGSISGSIISAIVL 259

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             +      +      L  + L +++L R   L+  + 
Sbjct: 260 TIISALLQDYPAVRMVLYSLILIIIMLFRPQGLMGTKE 297


>gi|264677221|ref|YP_003277127.1| inner-membrane translocator [Comamonas testosteroni CNB-2]
 gi|299530765|ref|ZP_07044180.1| inner-membrane translocator [Comamonas testosteroni S44]
 gi|262207733|gb|ACY31831.1| inner-membrane translocator [Comamonas testosteroni CNB-2]
 gi|298721281|gb|EFI62223.1| inner-membrane translocator [Comamonas testosteroni S44]
          Length = 330

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 128/302 (42%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             ++++ + +FA   ++++G  GLLS          AY        +G +  + + +  +
Sbjct: 34  FVMKLMCFALFASAFNLLLGYTGLLSFGHAAFLGGAAYVAGYTIKAWGFTPEVGMLLGTV 93

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           + G  G+I G  +++ +G Y ++ TL ++++   + ++    T G+ G+    R      
Sbjct: 94  VGGLLGLIFGWLAIRRQGIYFSMITLALAQMLFFVALQA-KFTGGEDGLQGVPR------ 146

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F    +  ++ MYYV L +   +  +I+    +      + I++N+    
Sbjct: 147 -------GKLFGVIDLSSDMVMYYVALIIVAAAFLLIVRTIHSPFGQVLKAIKENEPRAI 199

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   KL AF +S+A  G+AG+         +     ++ +  VI + ++GG+ +L
Sbjct: 200 SLGYDVNRFKLLAFVISAALTGLAGSLKTLVLGFATLSDVHWTTSGHVILMTLMGGLGTL 259

Query: 282 SKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           S     +A+++ +         +    + +++  +     T +  +   L +L+    ++
Sbjct: 260 SGPLLGSAVVVALENKIGEFGSFLAHATGVEWFSTLGESVTIVTGLIFVLCVLLFRKGIM 319

Query: 341 RL 342
             
Sbjct: 320 GE 321


>gi|288549661|ref|ZP_05967739.2| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Enterobacter cancerogenus ATCC 35316]
 gi|288317791|gb|EFC56729.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Enterobacter cancerogenus ATCC 35316]
          Length = 329

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 96/310 (30%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS-----YVILGSRYGLSIW 93
           + +  +   IY + A G ++V G L +++        +GA +       +  +   +   
Sbjct: 21  LINGVMLGSIYALIALGYTMVYGILRIINFAHGDILMVGALTTLSALNALNTTFPHMPQL 80

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L +  +  I+ A   ++ +   +F    L  A  +   I    +                
Sbjct: 81  LQLGFALSIAMAVCALLAMAVERFAYRRLRNAPRLAPLISGIGVSVLLQTVAMIIWTRNP 140

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                +       I          I  +     +     +   + L +  T +    R +
Sbjct: 141 LMFPQILPMDPIAITAGSEAHPPAIITVTGIVTVALALIVMIGLWLLVEYTRLGRGMRAV 200

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N +    +           FA+   F  +AG   A++    S  M  F   I   +  
Sbjct: 201 AENPRVATLMGVNPNAIITLTFAIGGMFAALAGVMMASNYGNASFSM-GFLPGIKAFTAA 259

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ ++        +L  +  L  G      + +       +        I L LV++
Sbjct: 260 VLGGIGNIRGAMIGGILLGVIEALGAGYLGELTDGVFG-----SNYQDVFAFIVLILVLV 314

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 315 FRPAGLLGER 324


>gi|170740837|ref|YP_001769492.1| urea ABC transporter permease protein UrtB [Methylobacterium sp.
           4-46]
 gi|168195111|gb|ACA17058.1| urea ABC transporter, permease protein UrtB [Methylobacterium sp.
           4-46]
          Length = 545

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/330 (15%), Positives = 102/330 (30%), Gaps = 21/330 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           AV         L   ++  Y  S+G    + ++ A GL+I  G +G++++       +GA
Sbjct: 236 AVAGIAFRLAILANLQNAWYGISLG---SVLLLAAIGLAITFGVMGVINMAHGEMVMLGA 292

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  ++          L   S  I+     ++             I   +     + +L 
Sbjct: 293 YTTFLVQEVIRQRAPGLFDWSLPIAIPLAFLVAGAVGIVIER--GIIRFLYGRPLETLLA 350

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            W      + G+              S           +       ++++    +   + 
Sbjct: 351 TWGVSLILQQGVRSLFGPTNREVGAPSY-MSGAVDVFGLAITWGRLWIVVFALAVFVGLN 409

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           L L+ T+     R +  N++   ++     +     F + S   G+AG   A S+     
Sbjct: 410 LILKATSFGLKTRAVTQNRRMAAAMGIRTPWIDAFTFGLGSGIAGIAGV--ALSQIDNVS 467

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                S  I    +V+ GG+ +L     A   L    +                      
Sbjct: 468 PNLGQSYIIDSFLVVVFGGVGNLWGTLVAALTLGAANKFLEPYAGAVLGK---------- 517

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               L++I + L I  R   L  L+  +  
Sbjct: 518 ---ILLLIFIVLFIQKRPRGLFALKGRAVE 544


>gi|114707992|ref|ZP_01440883.1| probable urea or short-chain amide ABC transporter, permease
           protein [Fulvimarina pelagi HTCC2506]
 gi|114536533|gb|EAU39666.1| probable urea or short-chain amide ABC transporter, permease
           protein [Fulvimarina pelagi HTCC2506]
          Length = 384

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 55/365 (15%), Positives = 105/365 (28%), Gaps = 39/365 (10%)

Query: 3   IFSLRLNKYDKILCLLAVVYPLLLFLFLG------ATKSQKYIDSMGIQILIYVMFAWGL 56
           IF+  L      L LL V   +L+ +               Y   +  + + Y + A  L
Sbjct: 2   IFAKYLGPRVWFLVLLLVAAAILVPMASLWLPRSHPLHVPSYAVPLIGKYICYALLALSL 61

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
            +V G LG+LSL     +A+G Y+  +   R   S  +                 LP   
Sbjct: 62  DLVWGYLGILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGDPVLPDFMVFLNWQELPWYW 121

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLY 157
              D    A L++      +   +                             +  D  +
Sbjct: 122 SGFDQFWFAALMVMVAPGLLAFVFGFFAFRSRVTGVYLSIITQAMTYALLLAFFRNDMGF 181

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                +        F          ++        +   I+  + R+ + N    +RD +
Sbjct: 182 GGNNGLTDFKDILGFSIQAPETRASLFAASCIALAIGVLIVGAITRSKLGNLMIAVRDAE 241

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                +     + KL AF VS+   G+AGA +      I+P  F    +I V+    +GG
Sbjct: 242 SRTRFIGWRPEYVKLFAFTVSAVMAGIAGALYVPQVGIINPGEFDPVNSIEVVVWAAVGG 301

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
             +L        ++     +   +                     ++      V +    
Sbjct: 302 RGTLIGPVLGALLVNYGKTVFTSIA--------------PQYWLFVLGGLFVFVTIFLPR 347

Query: 338 SLLRL 342
            ++  
Sbjct: 348 GIVGT 352


>gi|328542454|ref|YP_004302563.1| ABC transporter livM-like permease [polymorphum gilvum SL003B-26A1]
 gi|326412201|gb|ADZ69264.1| ABC-type transporter, livM-like permease component [Polymorphum
           gilvum SL003B-26A1]
          Length = 359

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 79/345 (22%), Positives = 141/345 (40%), Gaps = 19/345 (5%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           ++F +R ++      +   +   + F+ +  T +  ++ S+ I  L++ +   GL+I+ G
Sbjct: 18  ALFPIRQDR------IGLGIILAIAFVVIPLTANAFFLTSIMIPFLVFALATIGLNILTG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
             G LSL       +GAYS   +       ++ L+I +S + S   G++ GLPSL+ +G 
Sbjct: 72  YAGQLSLGTGAFMGVGAYSAYKLTSIFPEANLILVILLSGVFSAGIGVVFGLPSLRIKGL 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ TL      +   I+   + N                 V+    F    +      
Sbjct: 132 YLAVTTLAAQFFLEWCFIRIPWLYNYN---------ASGAIEVQQRELFGVIATGAAATP 182

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y+++L +      ++  + R  I   W  IRD   A   +    + AKLSAFAVSS 
Sbjct: 183 LTRYFIVLSIVIALTWLVSNVIRGRIGRQWMMIRDMDIAAELIGVRPLTAKLSAFAVSSY 242

Query: 241 FIGMAGAFFA-ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
             G+AGA           P  F  S +  V+ + ILGG+ SL+      A +  +  L  
Sbjct: 243 LCGVAGAMMVFFWLGAAEPSAFAISLSFQVLFMAILGGLGSLTGCYMGAAFIWILPVLLR 302

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
            +      S+     +       ++   +   ++   H L RL  
Sbjct: 303 VLLPSLGLSVAA--ETVQHLTFMIVGALIIFFLITEPHGLARLWR 345


>gi|253575736|ref|ZP_04853071.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251844779|gb|EES72792.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 293

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 105/306 (34%), Gaps = 25/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     +IY + A G ++V G L +++      + IG++  +     + L ++L   +
Sbjct: 9   LTNGLTIGVIYALIALGYTMVYGILKIVNFAHGDIFMIGSFLGLFFMQEFQLPLYLAFLL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           SA ++   GM++   + +       I  LI +     +L+       G            
Sbjct: 69  SAAVTAGIGMLIERLAYRPLRLADRIVPLISALGVSTLLVSLAQKLWGTEMHP------- 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +      +    + +      +LL    L   + L++ RT    A R    +  
Sbjct: 122 ----FPTTFGSQTYTFGSITFSEIQILILLLSFLLMLGLQLFVTRTKTGTAMRATSMSLT 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +          AFA+ S+    AG       + + P M   +  I   +  +LGG+
Sbjct: 178 NAALMGINTNRMISLAFAIGSSLAACAGIMVGIYYNAVYPTMGYMA-GINAFTAAVLGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L  V  L        + S++ F               L +V+L+R   
Sbjct: 237 GNIPGAMLGGVLLGLVETLGGAYISTQYKSVISFS-------------ILIIVLLIRPSG 283

Query: 339 LLRLRT 344
           +L  + 
Sbjct: 284 ILGSKE 289


>gi|149378302|ref|ZP_01896011.1| branched-chain amino acid ABC transporter, permease protein
           [Marinobacter algicola DG893]
 gi|149357409|gb|EDM45922.1| branched-chain amino acid ABC transporter, permease protein
           [Marinobacter algicola DG893]
          Length = 378

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 54/362 (14%), Positives = 103/362 (28%), Gaps = 38/362 (10%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLG-----ATKSQKYIDSMGIQILIYVMFAWGLSIV 59
            LR       L +L     ++ FL +      A     Y  ++  + L Y + A  + +V
Sbjct: 6   PLRERSTQIFLGVLFAALAIVTFLHVAMPEDSALYVSAYTVTLLGKYLCYALLAVAVDLV 65

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
            G LG+LSL     +AIG Y+  +   R                        LP      
Sbjct: 66  WGYLGILSLGHGAFFAIGGYAMGMYLMRQIGDRGTYGDPILPDFMVFLNWQELPWYWLGF 125

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLG 160
           D    A +++      + + +  +                          +  +  +   
Sbjct: 126 DMAWFAFIMVLLAPGLLALVFGFLAFRSRVTGVYLSIITQALTFALMLAFFRNEMGFGGN 185

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             +        F        + ++        +   I   +  + +       RD +   
Sbjct: 186 NGLTDFRDILGFNLRTDATRLGLFIATGIALAIGYVICRGIVTSKLGRVSIACRDAEARA 245

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             L   +   +L  F VS+   G+AGA +      I+P  F    +I V+  V LGG  +
Sbjct: 246 RFLGYRVDRVQLFVFVVSAMLAGVAGALYVPQVGIINPSEFSPLFSIEVVVWVALGGRAT 305

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L        ++     +  G+                      +     LV +     + 
Sbjct: 306 LYGAVIGAVLVNYAKTVFTGV--------------MPDAWLFALGGLFVLVTVFLPKGIA 351

Query: 341 RL 342
            L
Sbjct: 352 GL 353


>gi|229588137|ref|YP_002870256.1| putative amino acid ABC transporter permease [Pseudomonas
           fluorescens SBW25]
 gi|229360003|emb|CAY46857.1| putative amino acid ABC transport system, permease [Pseudomonas
           fluorescens SBW25]
          Length = 355

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/320 (15%), Positives = 97/320 (30%), Gaps = 27/320 (8%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------- 86
             Y  ++  +IL Y + A  L +V G  G+LSL   + +A+G Y+  +            
Sbjct: 47  SAYTLTLVGKILCYAIVALALDLVWGYAGMLSLGHGLFFALGGYAMGMYLMRQASGDELP 106

Query: 87  -RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
                  W  +P   + +      M L  L      L           + +         
Sbjct: 107 AFMTFLSWTELPWYWVGTEHFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIMTQAL 166

Query: 146 GKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
             AG+ +  R    +       +      F  +       ++   + +   S  +   L 
Sbjct: 167 TFAGMLLFFRNETGFGGNNGFTNFRSILGFGITEPGTRAVLFVATVALLVASLFLGWRLA 226

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           ++        +RD +             KL  + +S+   G+AGA +      I+P    
Sbjct: 227 QSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINPSEMS 286

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + +I     V LGG  +L        ++ G+                 F  +F      
Sbjct: 287 PTNSIEAAVWVALGGRGTLIGPLLGAGVVNGMKSW--------------FTVAFPEYWLF 332

Query: 323 LMVIALFLVILMRSHSLLRL 342
            +     +V L     ++ L
Sbjct: 333 FLGALFIIVTLYLPKGVIGL 352


>gi|225175945|ref|ZP_03729937.1| inner-membrane translocator [Dethiobacter alkaliphilus AHT 1]
 gi|225168533|gb|EEG77335.1| inner-membrane translocator [Dethiobacter alkaliphilus AHT 1]
          Length = 290

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 96/303 (31%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    Y + A G ++V G   L++      Y  GA+  +I+ +  GL     + +
Sbjct: 6   LVNGIVLGSTYALIALGYTMVYGIAELINFAHGEIYMFGAFVGMIMVTIVGLPFLPALVI 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+ +   + +       +A LI +      L     +  G            
Sbjct: 66  AMLAAALLGVTVEFIAYRPLRKSSRLAALISAIGASIFLQNAALLRWGPQSQGFPRPFEV 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V           + V       Y+L+    L  ++   + +T I  A R    +++
Sbjct: 126 NQIMV-----------AGVRISSLQIYILVISLVLMVALHFLITKTKIGKAMRATAQDKE 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       FA+ SA    AG       + +S  M      +      +LGG+
Sbjct: 175 TAALMGINVNRVISFTFAIGSALGAAAGVMVGIYFNSVS-PMMGLLPGLKGFVAAVLGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        IL     +        +   + F               L +V+L +   
Sbjct: 234 GNIPGAMLGGIILGIAETMGVAYGDSRYRDAIAF-------------AILIIVLLFKPSG 280

Query: 339 LLR 341
           LL 
Sbjct: 281 LLG 283


>gi|81300703|ref|YP_400911.1| integral membrane protein of the ABC-type Nat permease for neutral
           amino acids [Synechococcus elongatus PCC 7942]
 gi|81169584|gb|ABB57924.1| integral membrane protein of the ABC-type Nat permease for neutral
           amino acids [Synechococcus elongatus PCC 7942]
          Length = 359

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 63/360 (17%), Positives = 120/360 (33%), Gaps = 51/360 (14%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           YI  +   I ++ +F  GL++  G  GLL+   V    IGAYS  +L  +    +WL   
Sbjct: 4   YIILLVCTIALFALFCVGLNLHWGYTGLLNFGHVAFLLIGAYSVSLLAQQGWP-LWLAAI 62

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
               ++   G++MG+ SL+   DYL I T+ ++E+ +  +     +T G  G+     + 
Sbjct: 63  AGVTLAALLGLVMGVASLRLSQDYLGIVTVGLAEVLRIFVQNETGLTQGSFGVQAYPIIL 122

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG---------------------------- 189
                              +    +                                   
Sbjct: 123 QGWEPPIWQTHLLVVGLLAIAAWGYWQLWQWWRSSASRGKHWLAIVALGSSLIVLPPAAL 182

Query: 190 -------------------MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                                +L+ + +  L R+      + IR+++    +L   ++  
Sbjct: 183 GLADYERYPRSGQMLLLLGALWLTVAAVDRLVRSPWGRVLKAIREDETVAIALGKNVLSY 242

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           KL + A+  A  G+AG F+A     I PD F+      V ++++LGG           A+
Sbjct: 243 KLQSLALGGAIAGLAGVFYAWQLTAIYPDNFRPQLTFDVWTMLVLGGTAHRFGPVLGAAV 302

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                 L   +                     L+ + L  +++ R   +L  R   +   
Sbjct: 303 FWLYDSLTRFLLPAILPLD---GSQIGALRIALVGLLLMALMIWRPQGILGRREELSLGR 359


>gi|270260924|ref|ZP_06189197.1| transporter [Serratia odorifera 4Rx13]
 gi|270044408|gb|EFA17499.1| transporter [Serratia odorifera 4Rx13]
          Length = 358

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 53/333 (15%), Positives = 97/333 (29%), Gaps = 27/333 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L L           Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  
Sbjct: 33  FLALLPADHPLAISTYTLTLAGKILCYAVVAVALDLVWGYAGLLSLGHGLFFALGGYAMG 92

Query: 83  IL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
           +               S    S                 +M L        +   A    
Sbjct: 93  MYLMRQAAGDGLPAFMSFLSWSELPWFWSGTQYFAWALCLMILVPGVLAFVFGYFAFRSK 152

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            +     ++       G    +  +  +              FP +     + ++   + 
Sbjct: 153 IKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPITATGTRVALFLATVL 212

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   S +I   L R+        +RD +             KL  + +S+   G+AGA +
Sbjct: 213 LLAASLAIGFALARSKFGRVLTAVRDAENRLTFCGYDPKGFKLFVWTLSAVLCGLAGALY 272

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                 I+P     + +I     V LGG  +L        I+ G                
Sbjct: 273 VPQVGIINPGEMSPTNSIEAAIWVALGGRGTLVGPLLGAGIVNGAKSW------------ 320

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             F  +        + +   +V L     ++ L
Sbjct: 321 --FTVAIPEYWQFFLGLMFIIVTLFLPKGVIGL 351


>gi|163792962|ref|ZP_02186938.1| ABC-type branched-chain amino acid transport system, permease
           component [alpha proteobacterium BAL199]
 gi|159181608|gb|EDP66120.1| ABC-type branched-chain amino acid transport system, permease
           component [alpha proteobacterium BAL199]
          Length = 378

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 53/364 (14%), Positives = 100/364 (27%), Gaps = 39/364 (10%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYI------DSMGIQILIYVMFAWGLS 57
             L L++      L   V  +L+ +      S            +  + L Y + A  + 
Sbjct: 1   MPLGLSRIGVAFLLSLAVAAVLVPVLNLTVASDSTWHVSTTNVVLFGKYLCYALLALSID 60

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           +V G  G+LSL     +A+G Y+  +   R   S  +                 LP   +
Sbjct: 61  LVWGYCGILSLGHGAFFALGGYAMGMHLMREIGSRGVYGNPVLPDFMVFLNWKELPWYWY 120

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYF 158
             D    A L++      +   +                             +  D  + 
Sbjct: 121 GFDQFWFAALMVVLAPGALAFVFGMFAFRSRVTGVYLSIITQAMTFALLLAFFRNDMGFG 180

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +        F          ++ +              +  + +      +RD + 
Sbjct: 181 GNNGLTDFKGVLGFDLQNNATRCGLFALSAIALAGGFLACRAIVSSKLGKVLVAVRDAES 240

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +   KL  F VS+   G+AGA +      I+P  F  + +I  +  V +GG 
Sbjct: 241 RTRFIGYRVEHYKLFVFTVSAMMAGVAGALYVPQVGIINPGEFAPANSIEAVIWVAVGGR 300

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L   A    ++        G              +        +      V L     
Sbjct: 301 GTLVGAALGALVVNVGKSWFTG--------------ALPELWLFALGGLFIFVTLFLPKG 346

Query: 339 LLRL 342
           LL L
Sbjct: 347 LLGL 350


>gi|302871815|ref|YP_003840451.1| inner-membrane translocator [Caldicellulosiruptor obsidiansis OB47]
 gi|302574674|gb|ADL42465.1| inner-membrane translocator [Caldicellulosiruptor obsidiansis OB47]
          Length = 312

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 74/338 (21%), Positives = 135/338 (39%), Gaps = 42/338 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K   +  +  +V  L++ L +       YI      I++ ++ A  L+++ G  G  S
Sbjct: 1   MKKRLVVHSVFVIVLYLIITLLMKIGMIDDYIKLNLFLIMLNIILAVSLNLINGITGQFS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           L      AIGAY+  +L +       +L + +  + +  CG I+GLP L+ RGDYLAIAT
Sbjct: 61  LGHAGFMAIGAYTTAVLTTLEKPVPFYLTVLIGGLFAMICGFIIGLPVLRLRGDYLAIAT 120

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + I+     +  G +GI    +                               
Sbjct: 121 LGFGEIIRVIIQNIDYL-GGASGISDIPQGIDWTGYF----------------------- 156

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
              +  LS  +IL +  ++   A   IR+++ A  ++       K+ AF + + F G+AG
Sbjct: 157 --VITVLSVVVILNIINSSFGRAMIAIREDEIAAEAMGINTTLYKVMAFMIGAFFAGVAG 214

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           + ++ S   I PDMF F ++I ++ IV+               +          ++    
Sbjct: 215 SIYSGSFGFIQPDMFNFFKSIDILVIVV---------------LGGLGSISGSIISAIVL 259

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             L      +      L  + L +++L R   L+  + 
Sbjct: 260 TILSALLQDYPAVRMVLYSLILIIIMLFRPQGLMGTKE 297


>gi|330989138|gb|EGH87241.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331012526|gb|EGH92582.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 359

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
           + +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMREAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      + L  L      L           + +     
Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWALCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  S       ++   + +   S  I 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRATLFLATVLLLIASLYIG 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     +V L     ++ L
Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGL 352


>gi|239815098|ref|YP_002944008.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239801675|gb|ACS18742.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 309

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 99/305 (32%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G + L++        +GA +   +      S+      
Sbjct: 8   IINGLVLGSMYALIALGYTMVYGIINLINFAHGEVLMVGALTSWTIIGLMKESMPGTPGW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +I       +   +L F  + +A   L  S     ++         +    +  +   
Sbjct: 68  LILIIALIIACVVAATLNFVIEKVAYRPLRNSPKLAPLITAIGMSILLQTLAMIIWKPTN 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+       +  +       +L    F    ++  +  T +  A R   +N +
Sbjct: 128 --KAYPNLLSTTPIEVAGAVISPTQVMILSVTAFSLVVLMWLVNYTKLGRAMRATAENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + F + +    +AG  +A++   I+     F   +   +  + GG+
Sbjct: 186 VAALMGIRPDMVISATFIIGAVLAAIAGVMYASNYG-IAQHAMGFLPGLKAFTAAVFGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  +  G        +L      +        I L +++ +R   
Sbjct: 245 GNLAGAVVGGILLGLIEAIGSGYIGSLTGGVLG-----SNYSDIFAFIVLIVMLTLRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|297530333|ref|YP_003671608.1| inner-membrane translocator [Geobacillus sp. C56-T3]
 gi|297253585|gb|ADI27031.1| inner-membrane translocator [Geobacillus sp. C56-T3]
          Length = 329

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 57/291 (19%), Positives = 122/291 (41%), Gaps = 15/291 (5%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
           F        +  ++  +I I  +FA  L +++G  G++SL     + IGAY+  ++G   
Sbjct: 16  FAMPLVLSDFGINLATEIYIMAIFAMSLGLIMGYGGMVSLGHAGFFGIGAYTVAVIGQHV 75

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
             + +LL+ +S +ISG   ++ G   ++    Y  + TL   ++   +  + KP T G  
Sbjct: 76  ANT-YLLLLLSVVISGLIALVTGAVFIRTSKFYFLMITLAFGQLLYVLFWQLKPWTGGAD 134

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G+              S+     F    ++    +YYV+     +S  ++     +    
Sbjct: 135 GM--------------SVSAVMNFGFGEIVSPNALYYVMGIAFVMSYFLLYLFVGSPAGK 180

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
             R + +N+    +L   +   KL  + +S +  G+AGA +A     +SPD+  +  +  
Sbjct: 181 ITRGVMENEARMSALGYNVRVYKLLVYTLSGSLAGLAGALYAYFNVFVSPDLSSWMFSGQ 240

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           V+ +VI+GG+ +L   A   ++ + +          +   +     +  + 
Sbjct: 241 VMVMVIIGGVGTLLGPALGASVFVYLQNFMSTYTERWPMIMGGLLVALVLA 291


>gi|313126234|ref|YP_004036504.1| amino acid/amide ABC transporter membrane protein 2, haat family
           [Halogeometricum borinquense DSM 11551]
 gi|312292599|gb|ADQ67059.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Halogeometricum borinquense DSM 11551]
          Length = 426

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 60/343 (17%), Positives = 106/343 (30%), Gaps = 43/343 (12%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV------ILGSRYGLSIWLLI 96
            I +  + +FA     + G  G LS      Y  GAY  V      I           L+
Sbjct: 50  MIAVFYFGLFAMSFDFISGYTGYLSFGHAAFYGAGAYLVVLASNGKIPFVPVDTPFVALL 109

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA-------- 148
            +   ++ A  +I+G+ S +  G Y A+ TL  S++    +  W  + +           
Sbjct: 110 VLGGFVALALAVIIGVVSFRLTGVYFAMITLGFSQVLYVFIRDWDYVGSNPRDGIAVLER 169

Query: 149 ------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
                 G+   D L      +                    YY++  +       +  + 
Sbjct: 170 TAPFNIGVPGVDALNLAIGQLAGESVEGFLGFLTFSPAEVSYYMVGLVVAGCYFALQRIV 229

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MF 261
            +        IR+N++   ++       KL AFA+S+ F G+AG  FA  R  ++P+  F
Sbjct: 230 HSPFGRVLIAIRENEERARAVGYDTFRYKLGAFALSAFFAGVAGGLFAGFRRSVTPENSF 289

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL----------- 310
            F      +   I+GG  +++           + E                         
Sbjct: 290 YFLVAGDALLAAIIGGFGTIAGPLFGRLFDETIREFLSKGGEGGGLLPFIDDTLGEATLS 349

Query: 311 -----------KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                        D   N      + I   L +L   + LL  
Sbjct: 350 TVLYDGLTVNRAIDTFLNGHAALYLGIVFVLFVLYVPNGLLGT 392


>gi|147676795|ref|YP_001211010.1| ABC-type branched-chain amino acid transport system,
           permeasecomponent [Pelotomaculum thermopropionicum SI]
 gi|146272892|dbj|BAF58641.1| ABC-type branched-chain amino acid transport system,
           permeasecomponent [Pelotomaculum thermopropionicum SI]
          Length = 318

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 68/328 (20%), Positives = 131/328 (39%), Gaps = 37/328 (11%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++  +   L  + L       Y   + I I+I+ +     +++ G  G +S      + +
Sbjct: 6   IVFTLLFALFAVLLPLFVKAPYQMHILILIIIWSVIGTAWNLLGGYAGQVSFGHAAFFGL 65

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  +L   Y +S W  + +  + +    + +GL   + RG Y A+A L + EIF+ +
Sbjct: 66  GAYAAGLLKFHYDISPWWGMLLGPVAASVISLPIGLICFRLRGPYFALAMLALGEIFRLL 125

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                  TNG  GI +   +                       ++F YY+ L M  L+  
Sbjct: 126 FTNLTSFTNGARGILIMPEIT---------------------GKMFYYYLGLAMLALTLL 164

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               +  + +     +IR++Q A  SL       K  A   S+ F G+AGAF+      I
Sbjct: 165 TTYLIVHSKVGYYLVSIREDQDAATSLGIPTTRYKNYALLPSAFFTGLAGAFYMNYVAFI 224

Query: 257 SPDMFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            P++       +++VI +V+LGG+ +        A+ I + EL                 
Sbjct: 225 DPNIVFNLSNVSVMVILVVMLGGVATTWGPTVGAAMYIFLGELFRT-------------- 270

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +    +  +  I + L+I+   + ++  
Sbjct: 271 TLGSANVLVFGILVCLIIMFLPNGVVGE 298


>gi|239814295|ref|YP_002943205.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239800872|gb|ACS17939.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 309

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 98/305 (32%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G + L++        +GA +   +      S+      
Sbjct: 8   IINGLVLGSMYALIALGYTMVYGIINLINFAHGEVLMVGALTSWTIIGLMKESMPGTPGW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +I       +   +L F  + +A   L  S     ++         +    +  +   
Sbjct: 68  LILIIALIIACIVAATLNFVIEKVAYRPLRNSPKLAPLITAIGMSILLQTLAMIIWKPTN 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+          +       +L    F    ++  +  T +  A R   +N +
Sbjct: 128 --KAYPNLLSTTPIEVGGAVISPTQVMILSVTAFSLVVLMWLVNYTKLGRAMRATAENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + F + +    +AG  +A++   I+     F   +   +  + GG+
Sbjct: 186 VAALMGIRPDMVISATFIIGAVLAAIAGVMYASNYG-IAQHAMGFLPGLKAFTAAVFGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  +  G        +L      +        I L +++ +R   
Sbjct: 245 GNLAGAVVGGILLGLIEAIGSGYIGTLTGGVLG-----SNYSDIFAFIVLIVMLTLRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|260778377|ref|ZP_05887270.1| urea ABC transporter permease protein UrtC [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260606390|gb|EEX32675.1| urea ABC transporter permease protein UrtC [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 390

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 101/349 (28%), Gaps = 33/349 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +  ++ +    +L         + +  S+  + L Y M A  + +V G LG+LSL   
Sbjct: 30  AILAAVVLIPLANVLLPAGHPLHVETFAISLLGKYLSYAMLALAVDLVWGYLGILSLGHG 89

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +A+G Y+  +   R      +                 LP   +  D    A+L++  
Sbjct: 90  AFFALGGYAMGMYLMRQIGDRGVYANPELPDFMVFLNWQELPWFWYGFDQFWFASLMVVL 149

Query: 132 IFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRF 172
           +   +   +  +                          +  +  +     +        F
Sbjct: 150 VPGVLAYVFGYLAFRSRVSGVYLSIITQALTYALMLAFFRNEMGFGGNNGLTDFKDILGF 209

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
                   I ++         S  +   +  + +      IRD +     +   +   KL
Sbjct: 210 SLQQDSTRIALFIATGIALIFSYLLCRSIVASRLGRVALAIRDTESRTRFMGYDVDGIKL 269

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             F +S+   G+AGA +      I+P  F    +I V+  V LGG  +L        ++ 
Sbjct: 270 WVFVLSAVIAGIAGALYVPQVGIINPGEFAPLNSIEVVVWVALGGRATLFGAIVGALLIN 329

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                              F   F       +     L  +     L+ 
Sbjct: 330 YAKSW--------------FTVEFPEVWLFALGGLFVLSTMYFPKGLMG 364


>gi|261419709|ref|YP_003253391.1| inner-membrane translocator [Geobacillus sp. Y412MC61]
 gi|319766527|ref|YP_004132028.1| inner-membrane translocator [Geobacillus sp. Y412MC52]
 gi|261376166|gb|ACX78909.1| inner-membrane translocator [Geobacillus sp. Y412MC61]
 gi|317111393|gb|ADU93885.1| inner-membrane translocator [Geobacillus sp. Y412MC52]
          Length = 329

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 57/291 (19%), Positives = 122/291 (41%), Gaps = 15/291 (5%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
           F        +  ++  +I I  +FA  L +++G  G++SL     + IGAY+  ++G   
Sbjct: 16  FAMPLVLSDFGINLATEIYIMAIFAMSLGLIMGYGGMVSLGHAGFFGIGAYTVAVIGQHV 75

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
             + +LL+ +S +ISG   ++ G   ++    Y  + TL   ++   +  + KP T G  
Sbjct: 76  ANT-YLLLLLSVVISGLIALVTGAVFIRTSKFYFLMITLAFGQLLYVLFWQLKPWTGGAD 134

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G+              S+     F    ++    +YYV+     +S  ++     +    
Sbjct: 135 GM--------------SVSAVMNFGFGEIVSPNALYYVMGIAFVMSYFLLYLFVGSPAGK 180

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
             R + +N+    +L   +   KL  + +S +  G+AGA +A     +SPD+  +  +  
Sbjct: 181 ITRGVMENEARMSALGYNVRVYKLLVYTLSGSLAGLAGALYAYFNVFVSPDLSSWMFSGQ 240

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           V+ +VI+GG+ +L   A   ++ + +          +   +     +  + 
Sbjct: 241 VMVMVIIGGVGTLLGPALGASVFVYLQNFMSTYTERWPMIMGGLLVALVLA 291


>gi|299068452|emb|CBJ39675.1| leucine/isoleucine/valine transporter permease subunit
           (transmembrane abc transporter) [Ralstonia solanacearum
           CMR15]
          Length = 299

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 58/302 (19%), Positives = 119/302 (39%), Gaps = 41/302 (13%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             ++ + + I  + A  + + + S GLL++       IGAY+  +L     +   + +  
Sbjct: 11  YSNLVLTLGINALLALSIYLTL-SCGLLAMANAAFMGIGAYTSALLTMNAEMPFPVALLG 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +      +++G P+L+  G YLA+ATL   E+ + +++  +  T G  G+    +L  
Sbjct: 70  GMLAPAVVAVVIGRPTLRLSGVYLAMATLGFGEVVRVLILNTESWTGGALGLNGIPQLTE 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                       +     L+  ++  LRR+ +  A+  I++++ 
Sbjct: 130 WWH-------------------------VALAVALTLFVLARLRRSKVGRAFEAIKEDET 164

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +   KL AF + +   G+AGA  A     I P  F F   + ++++ ILGG 
Sbjct: 165 AAGLMGINVAGTKLLAFVLGAMIAGLAGALNAHLTFFIGPSEFGFDRGVEILTMAILGGT 224

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           + L+     + IL  + EL      +                  +  + L L++L     
Sbjct: 225 SGLTGPVLGSVILSLLPELLRAFKDF---------------RLVVNGLILMLIVLFLPKG 269

Query: 339 LL 340
           + 
Sbjct: 270 IW 271


>gi|300865733|ref|ZP_07110496.1| inner-membrane translocator [Oscillatoria sp. PCC 6506]
 gi|300336264|emb|CBN55646.1| inner-membrane translocator [Oscillatoria sp. PCC 6506]
          Length = 389

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/354 (13%), Positives = 103/354 (29%), Gaps = 30/354 (8%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F +   +   ++    +    L+ +F+          +   + L   + A G+ ++ G  
Sbjct: 8   FLVNEERRALVIEAAIIAGLALILIFIMPAILPSVRLNQLGRFLALAIAALGIDLIWGYT 67

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLS------IWLLIPVSAMISGACGMIMGLPSLKF 117
           GLLSL   + +A+G Y++ +       +         +                   L  
Sbjct: 68  GLLSLGHGVFFALGGYAFAMYLKLQIPADASVKLPEFMNLYGVTELPWFWQPFYSFPLSL 127

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGK----------AGIYVADRLYFLGTTVRSLI 167
               L  A L     +     + + +                     +L      +    
Sbjct: 128 IAVVLVPAFLGAFLGYLVFRNRIRGVYFSILTQAATIVFFNFFNGQQKLINGTNGLTDFK 187

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
             F    +    +   Y + +     + ++  WL           IRD++          
Sbjct: 188 TIFGATVNSPQTQFIFYTLTILFLAGAYALCRWLTSGRFGRLLIAIRDDEVRVRFSGYDP 247

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
              K+  F +S+A  G+AGA F      ISP     + +I ++  V +GG  SL      
Sbjct: 248 TDFKVVVFGISAALAGIAGALFTVQTGIISPKAMDIAFSIEMVIWVAVGGRASLVGAVVG 307

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             ++     L                  F             +V+++  + L+ 
Sbjct: 308 ALLVNFGKSLLSE--------------QFPEVWLFFQGALFLIVVMVLPNGLVG 347


>gi|77456816|ref|YP_346321.1| inner-membrane translocator [Pseudomonas fluorescens Pf0-1]
 gi|77380819|gb|ABA72332.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 359

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 54/320 (16%), Positives = 98/320 (30%), Gaps = 27/320 (8%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------- 86
             Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +            
Sbjct: 47  SAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAGDGLP 106

Query: 87  -RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
                  W  +P     +G+    M L  L      L           + +         
Sbjct: 107 AFMTFLSWTELPWYWSGTGSFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIMTQAL 166

Query: 146 GKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
             AG+ +  R    +       +      F  +       ++   + +   S  I   L 
Sbjct: 167 TFAGMLLFFRNETGFGGNNGFTNFRTILGFGITEPGTRAVLFLATVLLLVASLFIGWRLA 226

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+        +RD +             KL  + +S+   G+AGA +      I+P    
Sbjct: 227 RSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINPSEMS 286

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + +I     V LGG  +L        ++ G+                 F  +F      
Sbjct: 287 PTNSIEAAVWVALGGRGTLIGPLLGAGVVNGMKSW--------------FTVAFPEYWLF 332

Query: 323 LMVIALFLVILMRSHSLLRL 342
            +     +V L     ++ L
Sbjct: 333 FLGALFIVVTLYLPKGVIGL 352


>gi|108803212|ref|YP_643149.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
 gi|108764455|gb|ABG03337.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
          Length = 333

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 63/332 (18%), Positives = 123/332 (37%), Gaps = 14/332 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L V+   +L L         ++  + IQ L++ +     +++ G  G  S      + IG
Sbjct: 11  LLVLAAGVLVLIPVPLFLSGFLLEVAIQTLLFGLLGVAWNLMGGFAGQFSFGHAAFFGIG 70

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF-RGDYLAIATLIMSEIFQNI 136
           AY+  +  + YGLS W+ + + A ++ A G+++G  S ++                   +
Sbjct: 71  AYATAVAVTDYGLSPWVGMLLGAALAAAFGVLVGFLSFRYGLKGVFFALATFAFAEMLRL 130

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           + +     N   G  +  R                    F       YYV+L +  LS  
Sbjct: 131 ISRSLEAVNAARGYNIPIRSGNPW-----------LTLQFPQGSPNYYYVILALLALSLL 179

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            ++ L R+       +IR+N+ A  +L    +  KL A A+S+A   + GAF+      I
Sbjct: 180 AVILLMRSRAGTFILSIRENEDAAAALGVNPMRYKLLAVALSAALTAVGGAFYVQYFFFI 239

Query: 257 SPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            P+  F  S +I ++   I+GG+ +       + I+  + +    +       L      
Sbjct: 240 DPELAFGASVSIQILLPAIVGGIGTTWGPVVGSLIITVLGQGSTALVRTPPPFLEAL-QG 298

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
            +     +    + LV+L     +        
Sbjct: 299 VSGLDVAIYGALIVLVVLFLPRGVFGTLRERL 330


>gi|322830805|ref|YP_004210832.1| urea ABC transporter permease [Rahnella sp. Y9602]
 gi|321166006|gb|ADW71705.1| urea ABC transporter, permease protein UrtB [Rahnella sp. Y9602]
          Length = 522

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 82/288 (28%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +G+YS  ++ S +      L+ +  +++      +       
Sbjct: 249 ITYGLLGVINMAHGEMLMLGSYSTYMVQSLFQHYAPGLLALYPLVALPVAFFITAGIGMT 308

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W        G+ +      +       +         +
Sbjct: 309 LER--TVIRHLYGRPLETLLATWGISLILIQGVRMLFGAQNVEVANPGWLSGGIQLLPNL 366

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V++ +  +     L L +T +    R +  N+              + AF +
Sbjct: 367 VLPYNRIAVIIFVLLVLGLTWLLLNKTRLGMNVRAVTQNRAMAACCGVPTGRVDMLAFGL 426

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+             I    +V+LGG+  L+    A   L  V ++
Sbjct: 427 GSGIAGLGGV--ALSQLSNVGPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFGLGIVNKI 484

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L   +  
Sbjct: 485 LEPEIGAVLGKILILALIILFIQK-------------RPQGLFAFKGR 519


>gi|294339354|emb|CAZ87710.1| putative ABC-type branched-chain amino acid transport system,
           permease component [Thiomonas sp. 3As]
          Length = 328

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 55/302 (18%), Positives = 125/302 (41%), Gaps = 16/302 (5%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           +G++++ + +FA   +++ G  GL+S      +    Y   +  + +G    L I     
Sbjct: 33  LGMRMMCFALFACAFNLLAGYAGLISFGHAALFGGAGYLTGLALTTWGWPTPLGILTGVA 92

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G++MGL +++  G Y ++ TL +++I     ++    T G+ G+    R    G 
Sbjct: 93  TALLIGLVMGLLAVRRSGIYFSMITLALAQIVYFYALQA-HFTGGEDGLQGIPRGTLFGL 151

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++S                 MYY++L +   S   +  +  +      + +R+N+    
Sbjct: 152 PLQSDR--------------VMYYLVLAVFVASWWFMRRVVNSPFGQVLQAVRENEPRAI 197

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   KL  F +S+ F G+AGA  A      +     +S + +VI + ++GG+ + 
Sbjct: 198 SLGYRVNRYKLGVFLISAGFAGLAGAMKAVVMGFETLTDVHWSTSGLVILMTLVGGLGTD 257

Query: 282 SKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                   I+  + E    ++ +    + + +    N   + ++     L +L+    ++
Sbjct: 258 LGPILGAVIITVLEEKMGTISRFLVHATGVDWFHQLNDSVSMVIGAIFVLCVLLFRRGIV 317

Query: 341 RL 342
             
Sbjct: 318 GE 319


>gi|291460304|ref|ZP_06599694.1| high-affinity branched-chain amino acid transport protein
           [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291417059|gb|EFE90778.1| high-affinity branched-chain amino acid transport protein
           [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 358

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 76/327 (23%), Positives = 137/327 (41%), Gaps = 24/327 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            + +   L   LFL +  +      + + + IY + A  L++VVG  G LSL       I
Sbjct: 19  AMILAAYLAAELFLRSGAAGSLFKGLLVPLCIYSIMALSLNLVVGISGELSLGHAGFMCI 78

Query: 77  GAYSYVILGSRYGL-------SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
           GA+S                  ++L I + A+ +   G ++G+P L+ +GDYLAI TL  
Sbjct: 79  GAFSSASFSMLMKGQGLPNGLCLFLAIVIGALSAAVFGFLIGIPVLRLKGDYLAIVTLAF 138

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            EI +N++       + +   +       L       I            ++  + V + 
Sbjct: 139 GEIIKNLINALYFGVDERGAHFSLKDGAALKLAGGGRIIIKGAQGITGTPKLSNFTVGII 198

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  LS  ++L L  +    A   +RDN+ A  S+       KL AF +S+A  G AG  +
Sbjct: 199 LLLLSLFLVLRLMNSRTGRAIAAVRDNRIAAESIGLDAARLKLLAFTISAAIAGAAGVLY 258

Query: 250 AASRDRIS--PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
           A +   +   P  F ++++I+++  V+LGG+ ++     A  +L  + EL   +N Y   
Sbjct: 259 AHNLSSLQALPKNFGYNQSIMILVFVVLGGIGNMRGSVIAAVLLTLLPELLRSLNDY--- 315

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILM 334
                          +  + L L++L 
Sbjct: 316 ------------RMLIYAVVLILMMLF 330


>gi|284162939|ref|YP_003401562.1| inner-membrane translocator [Archaeoglobus profundus DSM 5631]
 gi|284012936|gb|ADB58889.1| inner-membrane translocator [Archaeoglobus profundus DSM 5631]
          Length = 321

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 68/328 (20%), Positives = 129/328 (39%), Gaps = 27/328 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L+ VV  ++    L        +      +L+Y+  A  L+I++G  G +S   ++ Y
Sbjct: 6   ISLIWVVAVIIAMGLLPVVTKSVTLRETVFIMLMYIALASSLNILLGYTGYVSFGHIVFY 65

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IG Y  + L   YG SI   + +  + S      +G   LK RG Y AIAT+ ++E  +
Sbjct: 66  GIGGYVAISLIEYYGFSIIPAMIIGGLFSAIIAYALGQAILKLRGAYFAIATIGVNEAIK 125

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++   +PI   +      D               +             YY++L +    
Sbjct: 126 ALVENLEPIGGAEGIYLHID--------------VYNPYGGPENAIWLSYYLMLVVTLAV 171

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +  +++++        IR+++ A  SL       K  A+A+S+ F GM GA F     
Sbjct: 172 VVVSWYVKKSKFGLGLLAIREDEDAAISLGVDTRSYKSLAYALSAFFPGMVGAIFFFKNG 231

Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
            I P   F  ++++ +I +V+LGG  +++                    +      L   
Sbjct: 232 NIEPGVAFHLTKSVEMIFMVMLGGFGTIAGPFIGAV------------AYERIRGYLLVS 279

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
            +F   H  +  + L L++L     ++ 
Sbjct: 280 EAFKNLHMAISGVILLLIVLFMPRGIVG 307


>gi|313903767|ref|ZP_07837156.1| inner-membrane translocator [Thermaerobacter subterraneus DSM
           13965]
 gi|313465955|gb|EFR61480.1| inner-membrane translocator [Thermaerobacter subterraneus DSM
           13965]
          Length = 326

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 64/338 (18%), Positives = 125/338 (36%), Gaps = 41/338 (12%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +        A    + L+    A     Y+  +   + I ++    L++V G LG  ++
Sbjct: 14  RRAVGWGWAAAAGAVVALYALGEAGWVSSYVTHVLCLVGINIILTASLNLVNGYLGEFAI 73

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                 A+GAY   +L  +  L   L    + + +G    ++G+P+    GDYLAI TL 
Sbjct: 74  GHAGFMAVGAYIAGVLTVKLDLPFALAFLAAGVAAGLVAWLVGIPAFTMFGDYLAIVTLG 133

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
            + I  NI+     +  G  G+                             +      + 
Sbjct: 134 FNMIIVNIINNIDAV-GGPRGMVGLP-------------------------KAANLLWVY 167

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
           G       +   L  +    A+  IR ++ A   +   +   K+ AF ++  F G+AGA 
Sbjct: 168 GTVLFMLWLFRNLVDSNYGRAFHAIRQDEVAANLMGIRVRRIKMLAFVLAGFFAGLAGAL 227

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +      I+P  F + ++  +++++ LGGM SLS      ++L  ++E   G+       
Sbjct: 228 WGHLIQYINPGSFTYIKSTEILAMLYLGGMGSLSGSVVGASLLTVLLESLRGL------- 280

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                    +    +  + L +++L     +L  R   
Sbjct: 281 --------GVWRMVISPLILVVIMLRMPRGILGFRELH 310


>gi|206564085|ref|YP_002234848.1| putative amino acid ABC transporter permease [Burkholderia
           cenocepacia J2315]
 gi|198040125|emb|CAR56107.1| putative amino acid transport system permease component of ABC
           transporter protein [Burkholderia cenocepacia J2315]
          Length = 319

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G S+V G +G+++      Y IGAY  ++  +           L
Sbjct: 23  LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGISAGYPLPL 82

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS +++G  G  +   + +       +  LI +      L  +  I  G    
Sbjct: 83  VLGAALIVSVIVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 139

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +             V        ++     L  ++ L++  + +  A 
Sbjct: 140 ----RDVSVPVLISGAFDIHLGGDYDVTIPYARLLIVCVTIVLMIALTLFISHSRMGRAC 195

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +    + G     +  +++P    F   I   
Sbjct: 196 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 254

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L        G     +  ++ F               L L
Sbjct: 255 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 301

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 302 ILLFRPTGLLG 312


>gi|182434888|ref|YP_001822607.1| putative D-ribose ABC transporter substrate-binding/permease
           protein [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326775405|ref|ZP_08234670.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|178463404|dbj|BAG17924.1| putative D-ribose ABC transporter substrate-binding/permease
           protein [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326655738|gb|EGE40584.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 652

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 104/310 (33%), Gaps = 27/310 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             VV  + + L  G   + + + ++G+Q  +  + A+G++ V+ S G + L+     A+ 
Sbjct: 31  ALVVLVVAMSLLSGDFLTTQNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVAALS 89

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A       +  G+ + L + ++ +   ACG + G      +         ++        
Sbjct: 90  ATVLAWSATSAGVPVVLAVVLAIVTGIACGFVNGALVSYGKLPPFIATLAML-------- 141

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                         +A  L  + +    +               ++   +L M  +    
Sbjct: 142 -------------SIARGLSLVISQGSPIAFPDSVSVLGDTLGGWLPVPVLVMIAMGLVT 188

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L L RT I  +   I  N++A       +   K+  +A+S  F  +AG   A+      
Sbjct: 189 ALILGRTFIGRSMYAIGGNEEAARLSGLRVKRQKIVIYALSGLFAAVAGIVLASRLVSAQ 248

Query: 258 PDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           P   +  E   + ++VI      GG+   S       IL  +      ++   F   +  
Sbjct: 249 PQAAQGYELDAIAAVVIGGASLAGGVGKASGTLIGALILAVLRNGLNLLSVSAFWQQVVI 308

Query: 313 DCSFNMRHTT 322
                +    
Sbjct: 309 GVVIALAVLL 318


>gi|78061502|ref|YP_371410.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia sp. 383]
 gi|77969387|gb|ABB10766.1| L-leucine ABC transporter membrane protein / L-valine ABC
           transporter membrane protein / L-isoleucine ABC
           transporter membrane protein [Burkholderia sp. 383]
          Length = 319

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G S+V G +G+++      Y IGAY  ++  +           L
Sbjct: 23  LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGISAGYPLPL 82

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS +++G  G  +   + +       +  LI +      L  +  I  G    
Sbjct: 83  VLGAALIVSVIVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 139

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +             V        ++     L  ++ L++  + +  A 
Sbjct: 140 ----RDVSVPVLISGAFDIHLGGDFDVTIPYSRLMIVCVTLVLMIALTLFISHSRMGRAC 195

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +    + G     +  +++P    F   I   
Sbjct: 196 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 254

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L        G     +  ++ F               L L
Sbjct: 255 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 301

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 302 ILLFRPTGLLG 312


>gi|42781083|ref|NP_978330.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus ATCC 10987]
 gi|42737004|gb|AAS40938.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus ATCC 10987]
          Length = 333

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 61/334 (18%), Positives = 131/334 (39%), Gaps = 31/334 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 15  VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  R      +  + I  + +IS     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 75  VALLFDRQGVSITNFLIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YYV L    +   +
Sbjct: 135 EKWRGLTHGGDGFTFGVPEVFRDRF-------------------TFYYVTLICLLIIFVL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L  +    
Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            R T ++ +   +V+L+    L+        ++R
Sbjct: 287 ERWTIILGVLYIIVLLVFPKGLVGTVKRLKNMKR 320


>gi|295095497|emb|CBK84587.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           (TC 3.A.1.4.-) [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 304

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 90/304 (29%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P+
Sbjct: 9   LINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLSAIGLALLAFFGLHSFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLVFTIVVTGVYGWTIERIAYKPLRNSTRLAPLISAIGMSLILQNYVQLSQGPRQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+   +  F     FV       ++L+        +   + RT +    R ++ ++K
Sbjct: 129 GVPTMLDGVLRFHLGEGFVQITYTKVFILIASFAGMLVLTWIINRTRLGRMCRAVQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A  G+AG     +       +  F   I   +  +LGG+
Sbjct: 189 MASILGINTDRIISLVFVIGAAMAGLAGVLITMNYGTFDFYV-GFVIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL        GM    +  +  F               L L+++ R   
Sbjct: 248 GSLPGAMLGGLILGVAEAQFSGMVNSDYKDVFSFG-------------LLVLILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|123443086|ref|YP_001007060.1| branched chain amino acid ABC transporter permease [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122090047|emb|CAL12910.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia enterocolitica subsp. enterocolitica
           8081]
          Length = 358

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 57/353 (16%), Positives = 101/353 (28%), Gaps = 27/353 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           L L+    +  LL  +  L L           Y  ++  +IL Y + A  L +V G  GL
Sbjct: 16  LSLSLAGIVTILLITLPFLALLPADNPLAISTYTLTVVGKILCYAVVAIALDLVWGYAGL 75

Query: 66  LSLNCVIAYAIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           LSL   + +A+G Y+  +                   W  +P     S      + L  +
Sbjct: 76  LSLGHGLFFALGGYAMGMYLMRQAAGDGLPAFMSFLSWSELPWFWRGSQYFIWALCLIVV 135

Query: 116 KFRGDYLAIATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
                             +     ++       G    +  +  +              F
Sbjct: 136 VPGLLAFIFGYFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTMLGF 195

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
             S     I ++   L +   S  +   + RT        +RD +             KL
Sbjct: 196 SVSATSTRIALFLATLALLIASLVLGFAVARTKFGRILTAVRDAENRLTFCGYDPKGFKL 255

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             + +S+    +AGA +      I+P     + +I     V LGG  +L        I+ 
Sbjct: 256 FIWTLSAVLCALAGALYVPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGIVN 315

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           G                  F  +        + +   LV L     ++ L   
Sbjct: 316 GAKSW--------------FTIAMPEYWQFFLGLIFILVTLFLPKGVIGLLRR 354


>gi|66047655|ref|YP_237496.1| inner-membrane translocator [Pseudomonas syringae pv. syringae
           B728a]
 gi|63258362|gb|AAY39458.1| inner-membrane translocator [Pseudomonas syringae pv. syringae
           B728a]
          Length = 359

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
           + +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      M L  L      L           + +     
Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDHFLWAMCLVVLAPGLLALIFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  S       ++   + +   S  I 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISAQGTRAALFLATVALLVASLYIG 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTMAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     +V L     ++ +
Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGM 352


>gi|87120263|ref|ZP_01076158.1| putative urea short-chain amide or branched-chain amino acid uptake
           ABC transporter permease protein [Marinomonas sp.
           MED121]
 gi|86164366|gb|EAQ65636.1| putative urea short-chain amide or branched-chain amino acid uptake
           ABC transporter permease protein [Marinomonas sp.
           MED121]
          Length = 395

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 52/350 (14%), Positives = 98/350 (28%), Gaps = 33/350 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  L      LL           Y  ++  + L Y M A  + I+ G  G+LSL     
Sbjct: 33  VISTLLACASNLLLTEDSPLYVSTYTITLLGKYLCYAMLALAVDIIWGYCGILSLGHGAF 92

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +A+G Y+  +   R      +                 LP      D    A L+   I 
Sbjct: 93  FALGGYAMGMYLMRQIGDRGVYGDPVLPDFMVFLDWKSLPWFWQGMDQFWFAILMAVVIP 152

Query: 134 QNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPS 174
             +   +  +                          +  +  +     +        F  
Sbjct: 153 GLLAFIFGWLAFRSRVTGVYLSIMTQALTYALLLAFFRNEMGFGGNNGLTDFKEILGFDL 212

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                 + ++ +   +  +   I  +L  + +      IRD +     +       K+  
Sbjct: 213 QADATRVSLFAITAFLLAVIFIISQYLMNSRMGKVILAIRDGESRARFMGYHTERYKVWL 272

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F  S+   G+AGA +      I+P  F    +I ++  V +GG  +L             
Sbjct: 273 FVYSAIIAGIAGALYVPQVGIINPGEFSPINSIEIVIWVAVGGRGTLI------------ 320

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                        +  +F   F       +     LV L     L+ L  
Sbjct: 321 --GAIIGALIINYAKTRFTALFPEAWLFALGGLFVLVTLYLPKGLMGLWE 368


>gi|332383229|gb|AEE68076.1| branched chain amino acid ABC transporter permease [Bordetella
           pertussis CS]
          Length = 320

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 67/294 (22%), Positives = 124/294 (42%), Gaps = 15/294 (5%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            +Y       I    +   GL +V G  G +SL      A+G Y   IL +R G+ ++  
Sbjct: 24  PEYQLYQVSLIAATAIIVLGLVVVCGIAGQISLGQAAFVALGGYGAAILATRLGVPLYAG 83

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           IP++A      G ++GL +L+  G YLA+AT+ ++ I Q  +I    +T G AG+ +   
Sbjct: 84  IPLAAAACALLGYLLGLATLRVSGHYLALATMAVTAIVQLAVINLDDLTGGAAGMPMPPL 143

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                +     +Y V++ +  LS +++  L R+ I  A+  +R 
Sbjct: 144 EIAGHV---------------LDNGASLYLVIVPVFALSYALVRNLMRSRIGRAFGAVRQ 188

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
            + A  ++   ++  K SAFA S     + G    A    + P  +  ++ +  ++I ++
Sbjct: 189 GEIAAAAMGVNVLHYKASAFAASGFLGALGGGLLGALSSYLDPSQYGITQTVYYLAIAVV 248

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           GGM S       +AI + + E+  G+  Y          +F M     +   + 
Sbjct: 249 GGMASPLGALIGSAIFVFIPEVLQGLQSYLGLVFALLLLAFIMLRPAGLASFIV 302


>gi|307731476|ref|YP_003908700.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|307586011|gb|ADN59409.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
          Length = 323

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/302 (15%), Positives = 123/302 (40%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             ++++ + +FA   ++++G  GLLS    +  A   Y         G S  L +     
Sbjct: 26  FVMKVMCFALFAAAFNLLIGYTGLLSFGHAMFLASAGYITGYAMQTLGFSPELGVLAGTA 85

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+++G+ +++ +G Y A+ TL ++++   + ++                      
Sbjct: 86  CATVLGLVVGIFAIRRQGIYFAMVTLALAQMVYFVFLQA--------------PFTHGED 131

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  ++ +Y+V+L +  L+  +I+ +  +        I++N+    
Sbjct: 132 GLQGVPRGKLFGVLDLSSDVALYFVVLTVMVLAFLLIVRIVHSPFGQVLVAIKENEPRAV 191

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+   G+AG+     +   +     ++ + +V+ + ++GGM +L
Sbjct: 192 SLGYDTDRFKLLAFILSAGLAGLAGSLKVVVQGFETLSDAYWTMSGLVVLMTLVGGMGTL 251

Query: 282 SKIAKATAILIGVVELCCGMNFYY-FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +    +       + + +  S     T +  +     +L     ++
Sbjct: 252 FGPLLGAALIVALEDRLGDIGSVLAAATGVDWFRSLGESVTIVTGVIFIACVLAFRRGIV 311

Query: 341 RL 342
             
Sbjct: 312 GE 313


>gi|330873701|gb|EGH07850.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
 gi|330963399|gb|EGH63659.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. actinidiae str. M302091]
 gi|331014669|gb|EGH94725.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 359

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 53/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
           + +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      M L  L      L           + +     
Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  S       ++   + +   S  I 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRATLFLATVVLLVASLYIG 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WKLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     +V L     ++ L
Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGL 352


>gi|297626281|ref|YP_003688044.1| High-affinity branched-chain amino acid transport system permease
           protein [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296922046|emb|CBL56610.1| High-affinity branched-chain amino acid transport system permease
           protein [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 294

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 102/303 (33%), Gaps = 23/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G +++ G + L++      Y +GAY      + + L  +  + V
Sbjct: 8   LVNGASLGSVYALIALGYTMIYGIIQLINFAHGDVYMVGAYVGYACMAHFHLGFFTSLVV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +    G+++   + K       IA LI +     +L        G          ++
Sbjct: 68  AMAVCTVLGVVIERVAYKPLRKSSRIAVLITAIGVSFLLEYTMMFFVGADVRSYPPLPHW 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +            +    VI       +      L  ++ L +RRT +  A R +  +  
Sbjct: 128 MQV---------SWHLGGVIITSLQVLIFAIAVALMIALQLIVRRTRLGKAMRAVSQDAD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + I+P M      +      +LGG+
Sbjct: 179 AARLMGINVNNTISFTFALGSALAGAAGVLVAVYYNSINPLM-GMVPGLKAFIAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L         +  V     G  F  F                ++   L ++++++   
Sbjct: 238 GLLPGALIGGYFIGVVETFVSGTGFSTFKDA-------------VVYALLIIILVVKPSG 284

Query: 339 LLR 341
           LL 
Sbjct: 285 LLG 287


>gi|307728867|ref|YP_003906091.1| urea ABC transporter permease UrtC [Burkholderia sp. CCGE1003]
 gi|307583402|gb|ADN56800.1| urea ABC transporter, permease protein UrtC [Burkholderia sp.
           CCGE1003]
          Length = 397

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/354 (14%), Positives = 103/354 (29%), Gaps = 37/354 (10%)

Query: 11  YDKILCLLAVV-----YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +  ++ L+AVV     +  L+           Y  ++  + + Y + A  L +V G  G+
Sbjct: 46  WLALIVLIAVVALGVPFATLVVPETSPLHLSAYATTVAGKFMCYAIAALALDLVWGYCGI 105

Query: 66  LSLNCVIAYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACG 107
           LSL   + +A+G Y+  +                                      G   
Sbjct: 106 LSLGHALFFALGGYAIGMYLMRAIGHDGKYGSDLPDFMVFLDWHQLPWYWQGTQHLGYAL 165

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           M++ L        +         +     +I            Y  +  +          
Sbjct: 166 MLVVLVPAVVAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFK 225

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
           R   FP +       +  +   +   +      +  + +      +RD +     L  + 
Sbjct: 226 RIGGFPITHAGTRTALLLITFAVLIAAFIGARAIVTSKLGRVVTAVRDGETRLMFLGYSP 285

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
           +  KL  + VS+   G+AGA +      I+P       +I +   V +GG  +L      
Sbjct: 286 LAYKLFVWTVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVG 345

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              + G                  F  +F       + +   LV L   + ++ 
Sbjct: 346 AFAVNGAKSF--------------FTANFPEYWLFFLGLIFVLVPLFLPNGIMG 385


>gi|86158561|ref|YP_465346.1| chain amino acid ABC transporter inner membrane subunit
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775072|gb|ABC81909.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 313

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 105/301 (34%), Gaps = 29/301 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             + +L   +FA   ++++G  GLLS          AY+       +GL   + + +   
Sbjct: 28  FAMNVLCLALFASAFNLLLGYTGLLSFGHAAFLGASAYATGWALRSWGLPPEVAVLLGTA 87

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           ++ A G+  G  +++  G Y A+ TL  +++   ++++    T G+ G+    R      
Sbjct: 88  LAAALGLAFGALAIRRSGIYFAMITLGFAQLVYFLVVQLPW-TGGEDGLQGIPR------ 140

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                          +      Y+ +         ++     +   +  R IR+N+    
Sbjct: 141 -------GRALGLLPLDDPRTAYWFVYAAFLAGFWLLHRAIHSPFGHVLRAIRENEPRAV 193

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   KL AF +S+   G+AG   A      S     +  +  V+ + +LGGM ++
Sbjct: 194 SLGYDVARYKLLAFVLSAGVSGLAGGLKAVVLQFASLSDVHWHRSGEVVLMTLLGGMGTV 253

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              +    +++ +                          T +        ++     ++ 
Sbjct: 254 LGPSVGALLVVALENYLA---------------DTGSWVTVITGAVFVACVVAFRRGIVG 298

Query: 342 L 342
            
Sbjct: 299 E 299


>gi|111224252|ref|YP_715046.1| putative ABC transporter permease ATPase [Frankia alni ACN14a]
 gi|111151784|emb|CAJ63504.1| putative ABC transporter permease protein ATPase [Frankia alni
           ACN14a]
          Length = 1057

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 55/307 (17%), Positives = 122/307 (39%), Gaps = 18/307 (5%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
           +   + +  +  ++  +    L +V G  G +SL  +    +G +    + + + +   L
Sbjct: 343 TSGSMRAAVVTSMLLGIVTLSLVVVTGYAGQVSLAQLTLAGVGGFLVSRMSTDWNIPFPL 402

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
              ++A+ +   G+++GLP+L+ RG  +A+ TL +    ++I  +   +  G  G  VAD
Sbjct: 403 APLLAALGAMIIGVVVGLPALRIRGLPVAVVTLALGMAVESIWFRNPDVNGGTGGAKVAD 462

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
              +           +      ++  + +  V L +          LRR+ +  A   +R
Sbjct: 463 PKLWGLNLRIGAGENYPRIQFGLLCLVVLILVGLAVAE--------LRRSRLGAAMLAVR 514

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
            N+++  +    +   K++AFA+ S   G+ GA  A  +  +  + F     + + +   
Sbjct: 515 ANERSAAAAGIDVARVKIAAFAIGSFIAGLGGALMAYQQTLVDAESFSVVGGLALFATAY 574

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           L G+TS+S    A  +  G +              L         +  +  +AL L +L+
Sbjct: 575 LAGITSVSGGLLAGVLGAGGLLFV----------ALDKAVDLGSWYQVITGVALVLSVLL 624

Query: 335 RSHSLLR 341
                + 
Sbjct: 625 NPEGAVG 631



 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/296 (12%), Positives = 88/296 (29%), Gaps = 7/296 (2%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           ++        ++   A GL +   S G+++          AY+Y  L     L     +P
Sbjct: 7   FLLLGLGSGAVFGALALGLVVTYRSSGVVNFATGAIALYTAYTYAFLRRGELLLPIPGLP 66

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG-----KAGIYV 152
            +  +    G+   L         L +   ++   +                       +
Sbjct: 67  KTVSVGSDWGLWPALGVSLVIAALLGVLLYVLVFRWLRAAPPVAKAVASIGLLIVFQALL 126

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
           A R+     +V+ ++    +    +  +    +  L +  L+ ++    R T    A R 
Sbjct: 127 AQRVGTTPVSVKRILPSDNYTIGDLRIQGDKLWFALTIVVLAIALAGVFRFTRFGLATRA 186

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
             + +K       +     L+ +A+ +   G++G   +     I      F    +  ++
Sbjct: 187 AAETEKGALVTGLSPDRIALANWAIGAVVAGLSGILISPIVPLIPVSYTLFIVPALAAAL 246

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           V   G  SL     A  ++  V      +   +     +           L  + L
Sbjct: 247 VA--GFNSLGLAVGAGLLIGMVQSELQYLQSQHSWLPQQGLGQLVPLVVILGYLVL 300


>gi|33600142|ref|NP_887702.1| branched chain amino acid ABC transporter permease [Bordetella
           bronchiseptica RB50]
 gi|33567740|emb|CAE31654.1| probable permease component of branched-chain amino acid
           transporter [Bordetella bronchiseptica RB50]
          Length = 320

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 67/294 (22%), Positives = 124/294 (42%), Gaps = 15/294 (5%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            +Y       I    +   GL +V G  G +SL      A+G Y   IL +R G+ ++  
Sbjct: 24  PEYQLYQVSLIAATAIIVLGLVVVCGIAGQISLGQAAFVALGGYGAAILATRLGVPLYAG 83

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           IP++A      G ++GL +L+  G YLA+AT+ ++ I Q  +I    +T G AG+ +   
Sbjct: 84  IPLAAAACALLGYLLGLATLRVSGHYLALATMAVTAIVQLAVINLDDLTGGAAGMPMPPL 143

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                +     +Y V++ +  LS +++  L R+ I  A+  +R 
Sbjct: 144 EIAGHV---------------LDNGASLYLVIVPVFALSYALVRNLMRSRIGRAFGAVRQ 188

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
            + A  ++   ++  K SAFA S     + G    A    + P  +  ++ +  ++I ++
Sbjct: 189 GEIAAAAMGVNVLHYKASAFAASGFLGALGGGLLGALSSYLDPSQYGITQTVYYLAIAVV 248

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           GGM S       +AI + + E+  G+  Y          +F M     +   + 
Sbjct: 249 GGMASPLGALIGSAIFVFIPEVLQGLQSYLGLVFALLLLAFIMLRPAGLASFIV 302


>gi|330960062|gb|EGH60322.1| high-affinity branched-chain amino acid ABC transporter permease
           BraE [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 219

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 22/214 (10%)

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVL 187
            +L  W   T G  G+ V    +F     R        +  +F F  +  +  IF+Y VL
Sbjct: 1   MVLNNWLSFTGGPNGVPVPAPTFFGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYTVL 60

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +      I   L R  I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG 
Sbjct: 61  FLVVLAVLFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGV 120

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
           FFA+ +  ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y   
Sbjct: 121 FFASYQGFVNPTSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY--- 177

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                          L  I + L+++ R   L+R
Sbjct: 178 ------------RVLLFGILMVLMMIWRPRGLIR 199


>gi|332161029|ref|YP_004297606.1| branched chain amino acid ABC transporter permease [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325665259|gb|ADZ41903.1| branched chain amino acid ABC transporter permease [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330859430|emb|CBX69775.1| hypothetical protein YEW_GJ27610 [Yersinia enterocolitica W22703]
          Length = 358

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 57/350 (16%), Positives = 105/350 (30%), Gaps = 27/350 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           L L+    +  LL ++  L L           Y  ++  +IL Y + A  L +V G  GL
Sbjct: 16  LSLSLAGIVTILLVILPFLALLPADNPLAISTYTLTVVGKILCYAVVAIALDLVWGYAGL 75

Query: 66  LSLNCVIAYAIGAYSYVILG----------SRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           LSL   + +A+G Y+  +            S      W  +P     S     ++ L  +
Sbjct: 76  LSLGHGLFFALGGYAMGMYLMRQAAGDGLPSFMSFLSWSELPWFWSGSQYFIWVLCLIVV 135

Query: 116 KFRGDYLAIATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
                             +     ++       G    +  +  +              F
Sbjct: 136 VPGLLAFIFGYFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTMLGF 195

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
             S     I ++   L +   S ++   + R+        +RD +             KL
Sbjct: 196 SVSATSTRIALFLATLALLIASLALGFAVARSKFGRILTAVRDAENRLTFCGYDPKGFKL 255

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             + +S+    +AGA +      I+P     + +I     V LGG  +L        I+ 
Sbjct: 256 FIWTLSAVLCALAGALYVPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGIVN 315

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           G                  F  +        + +   LV L     ++ L
Sbjct: 316 GAKSW--------------FTMAMPEYWQFFLGLIFILVTLFLPKGVIGL 351


>gi|299134319|ref|ZP_07027512.1| inner-membrane translocator [Afipia sp. 1NLS2]
 gi|298591066|gb|EFI51268.1| inner-membrane translocator [Afipia sp. 1NLS2]
          Length = 307

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/301 (16%), Positives = 111/301 (36%), Gaps = 25/301 (8%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++ + +LIY +   G +++ G  GLLS      +  GAY   I    +GL  +  + +  
Sbjct: 23  ALAVNVLIYGVVCVGYNLLFGYTGLLSFGHAAFFGAGAYITGIAIVHFGLPWYAAVVLGV 82

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +  G   +++G  S++ RG Y A+ TL ++++   + ++    T G+ G+          
Sbjct: 83  LGGGLLALVIGALSIRTRGIYFAMVTLALAQLVYYVALQASNWTGGENGLRG-------- 134

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                            +  +  YYVL+    L+   +  +  +        IR+N+   
Sbjct: 135 --FTVSKIDLFGLQINFLDPLQKYYVLMAFAGLALWFVSRILNSPFGAVIEAIRENETRA 192

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +    +  AKL +F +S     +AG   A     +  D   +  + +++ + +LGG  S
Sbjct: 193 RACGYNVERAKLMSFTLSGLICALAGTLSAMHLAIVPLDSLHYQTSGMIVMMTLLGGAGS 252

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                      + + ++      ++                 ++     L +L     + 
Sbjct: 253 FFGPFVGALAFLLMEDVFSIWTSHW---------------QIVVGSVFILFVLFLPKGIW 297

Query: 341 R 341
            
Sbjct: 298 G 298


>gi|296157552|ref|ZP_06840387.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295892324|gb|EFG72107.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 323

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/302 (16%), Positives = 123/302 (40%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             ++++ + +FA   ++++G  GLLS    +  A   Y         G S  L +     
Sbjct: 26  FVMKVMCFALFAAAFNLLIGYTGLLSFGHAMFLASAGYVTGYAMQTLGFSPELGVLAGTA 85

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+I+G+ +++ +G Y A+ TL ++++   + ++                      
Sbjct: 86  AATLLGLIVGIFAIRRQGIYFAMVTLALAQMVYFVFLQA--------------PFTHGED 131

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  +  +Y+V+L +  L+  +I+ +  +        I++N+    
Sbjct: 132 GLQGVPRGKLFGVLDLSSDTALYFVVLAVMVLAFLLIVRIVHSPFGQVLVAIKENEPRAV 191

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+   G+AG+     +   +     ++ + +VI + ++GGM +L
Sbjct: 192 SLGYDTDRFKLLAFILSAGIAGLAGSLKVLVQGFETLSDAYWTMSGLVILMTLVGGMGTL 251

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNS-LLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +          +S  +++  S     T +  +     +L     ++
Sbjct: 252 FGPLLGAALIVALEDRLGDFGAALASSTGVEWFRSLGESVTIVTGVIFIACVLAFRRGIV 311

Query: 341 RL 342
             
Sbjct: 312 GE 313


>gi|297567643|ref|YP_003686614.1| hypothetical protein Mesil_3292 [Meiothermus silvanus DSM 9946]
 gi|296852092|gb|ADH65106.1| hypothetical protein Mesil_3292 [Meiothermus silvanus DSM 9946]
          Length = 301

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 53/307 (17%), Positives = 108/307 (35%), Gaps = 19/307 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GLSI+   L L +        IGA++  +     G+S    + V
Sbjct: 11  LINALSVGSLYALVAVGLSIIFSLLRLTNFAHGDMMMIGAFAT-LFAQLAGMSFLAAVGV 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++S   G+I+   + +       +  L+ S     IL     +    +        + 
Sbjct: 70  GILVSALAGVIIERVAYRPVRGAPDVTMLLTSVALTYILENLGILLFSSSPRNFPLPEWM 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +  R      + +   + +  +          +  ++RRT +    R   ++  
Sbjct: 130 NHLYRFADGRITFNNINLLTLGVTLLAL--------LFLNWFVRRTRVGLGMRAAAEDLT 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    + AF ++SAF G+AG  +AA    + P M  F+  +      I+GG 
Sbjct: 182 AAHLVGLDVNQVIVVAFVLASAFAGVAGVLWAAQAGVVEPQM-GFTPLLKAFVAAIIGGF 240

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L G+  L   +   +           +     L+   L   +L R   
Sbjct: 241 GSIPGAIVGGFVLGGLEVLIQSLPGQW---------GLSSYRDALVFALLIAFLLFRPGG 291

Query: 339 LLRLRTP 345
           +L +R  
Sbjct: 292 ILGVRQE 298


>gi|29832709|ref|NP_827343.1| branched-chain amino acid ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
 gi|29609829|dbj|BAC73878.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
          Length = 393

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 71/327 (21%), Positives = 129/327 (39%), Gaps = 7/327 (2%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+    + L +       +   +G+  +   + A GL+++ G+ G LSL      A+GA
Sbjct: 5   LVMAGAAVLLCVLPFYLGAFWLQVGLFSMAAALGAVGLTLLTGTAGQLSLGHAFFLAVGA 64

Query: 79  YSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           Y YV L      GL   L + ++  +SG  G +    + + RG YL +ATL +  +  ++
Sbjct: 65  YGYVWLAGDPGPGLPPLLALVLAVCLSGLVGGLFSPVAGRVRGVYLGVATLALVFLGHHV 124

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           ++    IT G  G      +   G T  +              E  ++Y+ L +  +   
Sbjct: 125 MLNADSITGGFNGRS-VPPMSLGGFTFTASDPQLTVLGVPFGAEERLWYLALILLAVGWF 183

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               L       A   +RD++ A   +   +   + +AF VSS + G+AG   A    RI
Sbjct: 184 AARNLLNGRPGLALTALRDSETAAAVMGVPVARRRSAAFVVSSMYAGLAGVLLALVFRRI 243

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY----FNSLLKF 312
            PD F  + +I  ++++++GG+ S++  A     +  +  L                   
Sbjct: 244 VPDYFGLALSIDYLAMIVIGGLGSVAGAAAGAVFVTALPLLMARYADQLPLVAAPGAAGH 303

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSL 339
                     L   A+ LV+L     L
Sbjct: 304 AVGPTEASRYLYGAAIVLVLLFAPDGL 330


>gi|28872002|ref|NP_794621.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|28855255|gb|AAO58316.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 359

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 53/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
           + +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      M L  L      L           + +     
Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  S       ++   + +   S  I 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRATLFLATVVLLVASLYIG 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WKLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     +V L     ++ L
Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGL 352


>gi|71733664|ref|YP_276587.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|289625274|ref|ZP_06458228.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289647800|ref|ZP_06479143.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|71554217|gb|AAZ33428.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|320322766|gb|EFW78859.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. glycinea str. B076]
 gi|330867109|gb|EGH01818.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330870997|gb|EGH05706.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. aesculi str. 0893_23]
          Length = 359

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
           + +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      + L  L      L           + +     
Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWALCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  S       ++   + +   S  I 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRATLFLATVLLLIASLYIG 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     +V L     ++ L
Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGL 352


>gi|83950516|ref|ZP_00959249.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Roseovarius nubinhibens ISM]
 gi|83838415|gb|EAP77711.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Roseovarius nubinhibens ISM]
          Length = 322

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 66/323 (20%), Positives = 119/323 (36%), Gaps = 31/323 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
            + + L L      +  Y+  +   I+I+ + A G + V+G+LG L+      + +GAY 
Sbjct: 15  FWAVPLLLLALPLVTNAYVQFIANSIVIFALVALGFNFVIGNLGQLAFANTALFGLGAYG 74

Query: 81  YVILGSRYGLSIWLLIP-VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
             IL + +GL   + IP      +    +         R  YLAI TL   E+ + + + 
Sbjct: 75  SAILVNSFGLPWIVSIPLAGVAGAAGGFLASAAALRGIRLYYLAIITLAFGELMRWLYVH 134

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
            K +T G  G+ +                        +  +   +Y+ L +  L     L
Sbjct: 135 GKSVTGGTDGMGLPA---------------QSLFGFSLTDDRAKFYIFLVVAVLLFKATL 179

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            + R+ +  +   +R+N+ A  SL        + AF  S   +G AGA FA     + P+
Sbjct: 180 NILRSRVGRSVMAVRENEVATASLGIPTARIIVFAFMWSGFVVGCAGALFALHTSYVFPE 239

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F     I+  ++V++GG+ S+       A L  + E                       
Sbjct: 240 SFGMLHLIVSFAMVLVGGLGSVIGAVLGAAALTILPEYLRSF---------------PGM 284

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
                 + +  V+L     L  L
Sbjct: 285 EELFFGLIVIAVLLALPDGLASL 307


>gi|91785752|ref|YP_560958.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91689706|gb|ABE32906.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 323

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 124/302 (41%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             ++++ + +FA   ++++G  GLLS    +  A   Y         G S  L +     
Sbjct: 26  FVMKVMCFALFAAAFNLLIGYTGLLSFGHAMFLASAGYVTGYAMQTLGFSPELGVLAGTA 85

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+I+G+ +++ +G Y A+ TL ++++   + ++                      
Sbjct: 86  AATLLGLIVGIFAIRRQGIYFAMVTLALAQMVYFVFLQA--------------PFTHGED 131

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  ++ +Y+V+L +  L+  +I+ +  +        I++N+    
Sbjct: 132 GLQGVPRGKLFGVLDLSSDVALYFVVLAVMVLAFLLIVRIVHSPFGQVLVAIKENEPRAV 191

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+   G+AG+     +   +     ++ + +VI + ++GGM +L
Sbjct: 192 SLGYDTDRFKLLAFILSAGIAGLAGSLKVLVQGFETLSDAYWTMSGLVILMTLVGGMGTL 251

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNS-LLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +          +S  +++  S     T +  I     +L     ++
Sbjct: 252 FGPLLGAALIVALEDRLGDFGAALASSTGVEWFRSLGESVTIVTGIIFIACVLAFRRGIV 311

Query: 341 RL 342
             
Sbjct: 312 GE 313


>gi|241764226|ref|ZP_04762259.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
 gi|241366445|gb|EER60956.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
          Length = 358

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 78/345 (22%), Positives = 138/345 (40%), Gaps = 23/345 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           +IF +  ++      +   +   + FL +    S     ++ I  +I  + A G++I+VG
Sbjct: 18  AIFPIAQDR------IAIALMLAVAFLVVPMLASDYIFRAILIPFVIMALAALGVNILVG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGD 120
             G +SL      A+GAY       R      +  + +  + +   G++ GLPSL+ +G 
Sbjct: 72  YCGQISLGSGAFMAVGAYGAYNFFVRIPGLPLIPALILGGLCATFFGILFGLPSLRVKGL 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL        + ++ K  TN      V              +   +     +   
Sbjct: 132 YLAVATLAAQFFSDWMFLRIKWFTNNSDSGSV-------------SVNGLQVFGMPIESA 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
              Y   L +  + A +   L R AI   W  IRD   A   +    ++AKLSAFAVSS 
Sbjct: 179 TSKYIFCLAVLVVVALLAKNLVRGAIGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            IGMAGA +A        P  F    +  ++ +VI+GG+ S+       A ++ +  +  
Sbjct: 239 IIGMAGALWAFVHLGAWEPAAFSVEVSFRLLFMVIIGGLGSIMGGFFGAAFIVVLPIVLN 298

Query: 300 GMNFYYFNSLLKFDCSFNMRH--TTLMVIALFLVILMRSHSLLRL 342
                    +     +  + H    +    +   +++  H L +L
Sbjct: 299 QFLPALMGMVGIEISTAGVSHAELMIFGALIVWFLIVEPHGLAKL 343


>gi|46205037|ref|ZP_00049132.2| COG4177: ABC-type branched-chain amino acid transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 378

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 61/288 (21%), Positives = 122/288 (42%), Gaps = 29/288 (10%)

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
            +V+G+ G+ SL         AY    L  + GL  W+L  V A+I    G+++ LP+L+
Sbjct: 1   MLVIGTAGIYSLASYAIVGAAAYGATYLAVQLGLPWWVLPAVGAVIGFLFGLLIALPALR 60

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
             G Y A+ TL + E+ +  +I+ +   +   GIY A      G +    +         
Sbjct: 61  LDGFYYALLTLGVVELCRVYVIQSRTFGSATGGIYGAPSYLPEGLSQSGQL--------- 111

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN-TTIIFAKLSAF 235
               ++ YY  L +   +  +  ++    +    R   + ++AF        + A++S F
Sbjct: 112 ----LWGYYASLIVMVCALFLYRFVNGKRLGRVLRMAPEKKEAFAQACGVDYLRARISVF 167

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            +SS  IG  G F+A+     SP++F F   ++ ++++++GG+         TAI++ + 
Sbjct: 168 MISSTAIGAVGGFYASHFGGASPNLFSFDTLLLALAMLVIGGIGRSEGAVTGTAIVVFID 227

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            +                  +      L+ + + LV+L     L  ++
Sbjct: 228 RVM---------------IDWGPLRFVLIGMIMLLVVLFLRGGLFGIK 260


>gi|327399761|ref|YP_004340630.1| ABC transporter integral membrane subunit [Hippea maritima DSM
           10411]
 gi|327182390|gb|AEA34571.1| ABC-type transporter, integral membrane subunit [Hippea maritima
           DSM 10411]
          Length = 291

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 71/308 (23%), Positives = 136/308 (44%), Gaps = 31/308 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y+ ++ I + IY++ A  L+I+VG  G +SL     +AIGAYS+ IL ++YGL     
Sbjct: 2   SGYLVTLAITVGIYMILALSLNIIVGYAGQISLGHAAFWAIGAYSFAILTTKYGLGFIES 61

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
             ++ +I+   G+ +GLPSL+   D+LAI T+ ++ I Q I         G  GI     
Sbjct: 62  SVLAVIITTLVGIFLGLPSLRVSEDFLAITTIGINFIVQGIF-NSSDYFGGAMGIGGIPF 120

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
             F G  + +                    ++ G   ++       +R+    A   I+D
Sbjct: 121 PTFKGEMISNTA---------------FMLMVYGFVAITIVASYMFKRSWAGLASFAIKD 165

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A    + + +  KL +FA+ SA  G++G  +A+    IS   F F  ++ ++++V++
Sbjct: 166 DELAASVNSVSPVRFKLLSFAIGSAIAGISGVLYASFMSFISAADFSFPVSVTILAMVMV 225

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  ++      + +L+ + E+   ++ Y                  L  + L  ++  +
Sbjct: 226 GGEATIIGPIFGSVLLVILPEIFRFIHDY---------------RMLLYGLLLVFMMRFQ 270

Query: 336 SHSLLRLR 343
                  R
Sbjct: 271 PDGFFGKR 278


>gi|86750275|ref|YP_486771.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86573303|gb|ABD07860.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 324

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 52/341 (15%), Positives = 116/341 (34%), Gaps = 32/341 (9%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           +       +      ++A     ++   +  T    +     +Q L + + A   ++++G
Sbjct: 7   NSVPAPTTRRPVRDEMIAFALMTIVLAVVPFTGVYPFFV---MQGLCFALLACAFNLLIG 63

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             GLLS    +      Y        + L   L I    + +    +I GL +++ +G Y
Sbjct: 64  YGGLLSFGHAMFLGTAGYVSAHALKVWELPPELGIVAGVVAAFGLSVITGLIAIRRQGIY 123

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
            A+ TL +S++   I ++                       ++ + +   F    + +  
Sbjct: 124 FAMITLALSQLLYFIYLQA--------------PFTHGEDGIQGIPQGKMFGIIDLQHTT 169

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +Y+V+L    +   II     +      + IR+N+    SL       KL AF +S   
Sbjct: 170 TLYFVILIGFLIGFLIIYRAINSPFGEVLKAIRENEPRAISLGYKTDQYKLLAFILSGTL 229

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G AGA         S     +S +  ++ + ++GG+ ++        ++I + +   G 
Sbjct: 230 AGFAGALKVFVAQNASLTDVHWSMSGEIVLMTLVGGLGTIFGPVVGAFVIIAMQQYLAGF 289

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                              T +  +     +L     ++  
Sbjct: 290 ---------------GQWVTVIQGVIFVACVLTFRRGIVGE 315


>gi|84683570|ref|ZP_01011473.1| probable transmembrane abc transporter protein [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84668313|gb|EAQ14780.1| probable transmembrane abc transporter protein [Rhodobacterales
           bacterium HTCC2654]
          Length = 339

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 55/329 (16%), Positives = 124/329 (37%), Gaps = 26/329 (7%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            + L + +G         ++G  +L+  +FA  L +V+G  G+++L   + + +GAY   
Sbjct: 19  LVPLIVAIGCYYLFPGYLTLGAAVLVMAIFAVSLDLVIGYAGIVTLGHSVFFGVGAYGAA 78

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
            L      +      ++  ++    ++ G   L+ +   L + T+ ++ I      K   
Sbjct: 79  KLSIAGIDTPIAAALIAGAMASLLAVLTGPFVLRLKHLPLIMVTVAIAAIAHEAANKMSW 138

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+        LG    S+                 Y  +L    L   I   + 
Sbjct: 139 LTGGHDGLPNLTFEPVLGLFKWSIW------------GTTSYLYVLAWLVLLVIISRIVV 186

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            ++   A + IR N+     +   ++  ++  +  S+   G+AGA +A + + +S +   
Sbjct: 187 SSSFGMALQGIRQNELRMRVMGAPVLKQQVIIYTYSAFLAGIAGALYAQTNNFVSLETLT 246

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
               +  +++++LGG+  +       A+ + V  L    + Y++                
Sbjct: 247 VDLGVFALAMIVLGGLGRIYGAIIGAAVYMIVQYLAQQWDPYFW--------------ML 292

Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLER 351
            + + L LV+      LL +   +    R
Sbjct: 293 AIGVLLVLVVRFGKGGLLGIAEKAWLRVR 321


>gi|115525737|ref|YP_782648.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115519684|gb|ABJ07668.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 390

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 52/353 (14%), Positives = 107/353 (30%), Gaps = 36/353 (10%)

Query: 13  KILCLLAVVYPLLLFLFLGATKS----QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +L + A+   L LF  L    S      Y+ ++  + + Y + A  + ++ G  G+LSL
Sbjct: 17  FVLVVAAIGVALPLFNLLLPEGSTLHVPTYLLALFGKYVCYALLALSIDLIWGYCGILSL 76

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                +A+G Y+  +   R   S  +                 LP   +  D    A L+
Sbjct: 77  GHGAFFALGGYAMGMYLMRQIGSRGVYGNPVLPDFMVFLNYKALPWYWYGFDMFWFAALM 136

Query: 129 MSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRF 169
           +  +   +   +  +                          +  D  +     +      
Sbjct: 137 VLVVPGLLAFGFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRNDFGFGGNNGLTDFKDI 196

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
             F          ++ +      +   I   +  + +      IRD +     L   +  
Sbjct: 197 LGFNVQADGTRAALFALSCLALIVGFLICRAVVTSKLGKVLIAIRDAESRTRFLGYRVES 256

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            KL  F +S+   G+AGA +      I+P  F  + +I  +  V +GG  +L   A    
Sbjct: 257 YKLFVFTLSACMAGVAGALYVPQVGIINPGEFAPANSIEAVIWVAVGGRGTLIGAALGAV 316

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           ++     +                         ++     LV L+    ++  
Sbjct: 317 VVNYAKTVFTS-------------GPLAPYWLFMLGALFVLVTLLLPKGIVGT 356


>gi|299532791|ref|ZP_07046178.1| membrane protein [Comamonas testosteroni S44]
 gi|298719015|gb|EFI59985.1| membrane protein [Comamonas testosteroni S44]
          Length = 402

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 52/351 (14%), Positives = 100/351 (28%), Gaps = 33/351 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLG-----ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +   L  L +V  +   L L      A     Y+  +  + + Y + A  + ++ G  G+
Sbjct: 22  WTAFLLALTMVCAVAPALNLWVPEDSALHLSDYMLGLLGKFMCYAICALAIDLIWGYTGI 81

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSI-----------WLLIPVSAMISGACGMIMGLPS 114
           LSL   + +A+G Y   +   R                W  +P    +SG+    + L  
Sbjct: 82  LSLGHGLFFALGGYVMGMYLMREAAGPDALPAFMGFLDWKELPWHWALSGSFAATVLLVF 141

Query: 115 LKFRGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           L                        +I            +  +  +              
Sbjct: 142 LVPGLIGGLFGYFAFRSRIKGVYFSIITQALTYAAMLLFFRNETGFGGNNGFTGFKTLLG 201

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F  +     + ++ +             WL R+      + +RD +          +  K
Sbjct: 202 FSVNSQAMHVLLFALSGLALLGCFLFSRWLMRSKYGRVLQAVRDAESRTMFCGYNPLPYK 261

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           LS + +S    G+AGA +      I+P       +I +     +GG  SL         +
Sbjct: 262 LSIWVISVMMCGLAGALYVPQVGIINPSEMSVGNSIEMAVWTAVGGRASLVGPIIGAFAV 321

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            G                     +       ++     +V L     L+RL
Sbjct: 322 NGGKSWLT--------------VAAPEYWLYVLGALFIVVTLFMPGGLIRL 358


>gi|295109214|emb|CBL23167.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           (TC 3.A.1.4.-) [Ruminococcus obeum A2-162]
          Length = 294

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 102/306 (33%), Gaps = 24/306 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+        IY + A G ++V G   +L+        +GAY  +   +R G+S  L +
Sbjct: 5   SYLKDGISLGSIYAIIALGYTMVYGIAKMLNFAHGDVIMVGAYVILTAVTRGGMSPVLAV 64

Query: 97  PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
            +S +     GM++   +    R     +A LI +     +L     +  G         
Sbjct: 65  ALSVIFCTVLGMVIEKVAYSPLRKASSNLAVLITAIGVSYLLQNLALLIFGADAKSFVTV 124

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           +     ++             ++ +      +L    + A ++L++++T    A + + +
Sbjct: 125 IDVPSVSLFD---------GQLVIKGITIVTILSCIVIMAGLMLFVQKTKPGRAMQAVSE 175

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A   +   +       FA+ S    +AG     +   ++P        I      + 
Sbjct: 176 DRDAAQLMGVNVNATISMTFAIGSGLAAIAGLLLCQTYPTLTPYT-GAMPGIKAFVAAVF 234

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S+        +L  +               + F               L +V+L++
Sbjct: 235 GGIGSIPGAMVGGILLGVIEIFGKAYISSQVADAICF-------------AVLIVVLLVK 281

Query: 336 SHSLLR 341
              L  
Sbjct: 282 PTGLFG 287


>gi|296102371|ref|YP_003612517.1| branched-chain amino acid transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295056830|gb|ADF61568.1| branched-chain amino acid transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 524

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 84/288 (29%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY+  ++           + +  +++      +       
Sbjct: 251 ITYGLLGVINMAHGEMLMLGAYATWMVQQIMASVTPQWLALYPVVALPVAFCLTAGIGMI 310

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      L     + +       + +
Sbjct: 311 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRMTFGAQNLEVANPAWLSGGVQVFANL 368

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                   VL  +  +     L L +T +    R +  N+              + AF +
Sbjct: 369 TLPWNRIVVLGFVLMVLFFTWLVLNKTRLGLNVRAVTQNRSMAACCGVPTGRVDMLAFGL 428

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+             I    +V+LGG+  L+    A   L    ++
Sbjct: 429 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGSVAAAFGLGIFNKI 486

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                    ++++A+ L I  R   L  L+  
Sbjct: 487 LEPQMGAVLGK-------------IVILVAIILFIQKRPQGLFALKGR 521


>gi|222086386|ref|YP_002544920.1| branched-chain amino acid ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221723834|gb|ACM26990.1| branched-chain amino acid ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 349

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 109/310 (35%), Gaps = 15/310 (4%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +      +L + +  L         +Q     +  +I+ + + A  + +++G  G++SL 
Sbjct: 20  RRSARWSVLELAFWALAVTSWFLFPNQH---LILTEIVGFAILALSIDLMLGYAGIVSLG 76

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
               Y +GAY+  +            + V A+       +     L+       + TL +
Sbjct: 77  QAAMYGVGAYASGLFSIHVTGEPLSGLVVGALSGTVVAFLTSFLLLRGGDLTRLMVTLGV 136

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           + +F  I  +   +T G  G+         G     +     +  S  +  +      L 
Sbjct: 137 AAVFAEIANQANWLTGGADGLQGITINPLFGVFDFDIYGHTGYAYSLAVLFVLFLLARLI 196

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +             +    + + IRDN     ++   +    ++ + +S A+ G+AGA F
Sbjct: 197 VS------------SPFGYSLKAIRDNPLRASAVGVPVNARLVAIYTLSGAYAGIAGALF 244

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A ++  IS D   F ++   + I+++GG   L        +   + +    +   Y+   
Sbjct: 245 AQTQQFISLDALSFQKSADGLMILVIGGTGYLYGGIIGALVYELIQDGLSSLTPQYWQFW 304

Query: 310 LKFDCSFNMR 319
           L       + 
Sbjct: 305 LGMLLVAFVL 314


>gi|291296498|ref|YP_003507896.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
 gi|290471457|gb|ADD28876.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
          Length = 304

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 62/327 (18%), Positives = 133/327 (40%), Gaps = 32/327 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++  LL F  + A    ++   +  +I+I+ + A  L++++G  G++S      + +GA
Sbjct: 8   VLLGLLLAFPPIAAAMGLEFYQGLLTKIMIFALAASSLNLILGYGGMVSFGHAAYFGLGA 67

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL      S W++  V+  +S    +++G  SL+ RG Y  + TL  +++   +++
Sbjct: 68  YTVAILMREGVTSGWVIWAVAVGLSALLALLIGAISLRTRGIYFIMITLAFAQMIYYLVV 127

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            +K                        L         F + +  +YY+ LG+   +  ++
Sbjct: 128 SFKQYGG-----------------EDGLRARRPEFGLFELNDTTLYYLTLGVLLAALYLL 170

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L  +      + IR+N+    +L   +   +L AF ++ A  G+AG   A      SP
Sbjct: 171 YRLVHSRFGRVLQAIRENEARALALGYPVFHFQLVAFVLAGALAGLAGVLMAHYTQYASP 230

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           ++  + ++  ++ +VILGG+           +L  V E+   +  ++             
Sbjct: 231 NLLAWQQSGHLMMMVILGGVGQFWGGVLGALVLSLVEEILQDLTIHWQLG---------- 280

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345
                + + L  ++L     L  L   
Sbjct: 281 -----VGLILLFIVLFAPKGLAGLMRR 302


>gi|89899880|ref|YP_522351.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89344617|gb|ABD68820.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 333

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 55/346 (15%), Positives = 129/346 (37%), Gaps = 35/346 (10%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
            +  K+ +I  +  ++  L+  +               +++L + +FA   ++++G  GL
Sbjct: 15  TKAAKFLRITYIALLILALVAPMIGLYPV-------FVMKLLCFALFACAFNLLLGFTGL 67

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           LS      +   AY    L   +  +  L I    + SG  G+++G  +++ +G Y A+ 
Sbjct: 68  LSFGHAAFFGSAAYITGYLIKSHNFTPELGIVAGMIGSGLIGLVVGYVAIRRQGIYFAMI 127

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL ++++   + ++                       ++ + R   F    +  +  MYY
Sbjct: 128 TLALAQMVYFVCLQ--------------APFTGGEDGLQGVPRGALFGLLSLQSDTAMYY 173

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +++ +       +  +  +      + IR+N+    SL   +   KL AF +S+A  G+A
Sbjct: 174 LVVAVFVAGFLAVSRIVHSPFGQVLKMIRENEPRAISLGYQVDRYKLMAFVLSAALAGLA 233

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G+         +     ++ +  VI + +LGG+ +         I+I + +        +
Sbjct: 234 GSLKTLIMGFATLSDVHWTMSGEVILMTLLGGVGTFFGPVMGAGIVISLQDTLADKVGSW 293

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            N               ++ +   L +L     ++          R
Sbjct: 294 VN--------------VIIGVIFVLCVLAFRKGVVGELQAWLERRR 325


>gi|311103676|ref|YP_003976529.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310758365|gb|ADP13814.1| inner-membrane translocator 5 [Achromobacter xylosoxidans A8]
          Length = 326

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 51/307 (16%), Positives = 118/307 (38%), Gaps = 19/307 (6%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
              ++  +  + LIY + A  L +V+G   ++S    + + +G Y+  I+      +  +
Sbjct: 30  GSPFLIGVVTRFLIYGLAAVSLDLVIGYGAMVSFGHAMFFGLGGYAVGIIAFHTAEAGPI 89

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
                +  +     I  +        +  +A       F  I + +  +        +  
Sbjct: 90  FGWAGSNAALVVWPIALIVCALAGWLFGYLALRTRGVQFIMITLAFGQMVY----FVLVS 145

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
             ++ G     + +    P   +   +  YYV L +  L   + + +  +      + +R
Sbjct: 146 LQFYGGDDGLMIPQRNELPGINLESPMVFYYVCLALLTLWTLLCIRVTNSRFGMVLQALR 205

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
            +++   +L       +LSAF +S+   G+AG  +A     ++PDM  ++++  +++IVI
Sbjct: 206 QSERRSINLGVAPTPYRLSAFVLSAMGTGLAGVLWANYAGLVTPDMAAWTKSGELMAIVI 265

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           LGG+ +L       A+ +G+ ++   +  ++                  M   L LV+L 
Sbjct: 266 LGGVGTLLGPIAGAAVFLGLEQMLSSLTEHW---------------LLYMGPILVLVVLW 310

Query: 335 RSHSLLR 341
               L  
Sbjct: 311 GEKGLFG 317


>gi|301629568|ref|XP_002943910.1| PREDICTED: putative ribose/galactose/methyl galactoside import
           ATP-binding protein-like [Xenopus (Silurana) tropicalis]
          Length = 929

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 65/218 (29%), Gaps = 21/218 (9%)

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
               L  W  +  G        R   + + +   +RF    S  ++       ++     
Sbjct: 1   MSIFLQNWVALGQGA-------RDMAVPSLLPGALRFGAEDSFEIVVPYSRVLIIAVTVV 53

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L  ++ L+++ + +  A R    +      L           F + +    + G   A +
Sbjct: 54  LMIALTLYIKHSRMGRASRACSQDMHMAGLLGIDTHRVISFTFILGAMLAAVGGVLIALA 113

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
             +++     F   I   +  +LGG+ S+        +L              +  ++ F
Sbjct: 114 VGKLN-PFIGFIVGIKAFTAAVLGGIGSIPGAMLGGVLLGVAETFAAAYISSEYKDIVAF 172

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                          L L++L+R   LL        L 
Sbjct: 173 G-------------LLVLILLVRPTGLLGKPEVEKMLR 197



 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/88 (34%), Positives = 46/88 (52%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               + +    +    +IYVM   GL++VVG  GLL L  V  YA+GAY+Y +L    G 
Sbjct: 237 WPFFAGRNAVDIATLAMIYVMLGLGLNVVVGFAGLLDLGFVGFYAVGAYTYALLFHWAGW 296

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFR 118
           S W  +P++   +   G ++G P L+ R
Sbjct: 297 SFWQALPLAGTAAALFGFVLGFPVLRLR 324


>gi|30020070|ref|NP_831701.1| branched chain amino acid ABC transporter permease [Bacillus cereus
           ATCC 14579]
 gi|229144573|ref|ZP_04272976.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus BDRD-ST24]
 gi|296502554|ref|YP_003664254.1| branched chain amino acid ABC transporter permease [Bacillus
           thuringiensis BMB171]
 gi|29895620|gb|AAP08902.1| Branched-chain amino acid transport system permease protein livM
           [Bacillus cereus ATCC 14579]
 gi|228638986|gb|EEK95413.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus BDRD-ST24]
 gi|296323606|gb|ADH06534.1| branched chain amino acid ABC transporter permease [Bacillus
           thuringiensis BMB171]
          Length = 333

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 59/325 (18%), Positives = 128/325 (39%), Gaps = 31/325 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 15  VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  R      +  + I  + ++S     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 75  VALLFDRQGVSITNFLIGIVAAIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YYV L    +   +
Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L  +    
Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
            R T ++ +   +V+L+    L+  
Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGT 311


>gi|294341960|emb|CAZ90389.1| putative ABC-type branched-chain amino acid transport system,
           permease component [Thiomonas sp. 3As]
          Length = 311

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 67/325 (20%), Positives = 133/325 (40%), Gaps = 30/325 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +   L            +    +     +Y + A    IV+G  G+  +   + + +GAY
Sbjct: 13  LGAALWAIGLAIPLVLDQTWVFIAALFAVYAIVALSQDIVLGRAGMFDMGHAVYFGVGAY 72

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-I 138
              IL + +   I+   PV+ +++G  G ++  P +K RGDYL +AT+  + IF   L  
Sbjct: 73  VTSILNTHFNWPIFATWPVAILVAGLVGAVLAAPIVKLRGDYLLVATIGFNAIFVLALRN 132

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +T G  GI+        G ++ S                  +++      +   +I
Sbjct: 133 NLGHLTGGSDGIFGIGVPSLFGFSLSSQN--------------AQFWLDWLAFAVILLLI 178

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+ +   +  ++ +Q A  ++       ++ AFA+ +A  G AG  FA     +SP
Sbjct: 179 RNLDRSHLGRVFYYLKHDQLAATTMGVDARAYRVLAFALGAALAGFAGTLFATLMAAVSP 238

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F F+E++ + +IV++GG  S+  +   T ++  V ++      Y              
Sbjct: 239 GAFVFTESVTLFAIVLVGGQGSIPGVLLGTVLMFVVPQIFRSFAEY-------------- 284

Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343
               +  IA+ +V+++R   +   R
Sbjct: 285 -RYFIFGIAMVVVMVLRPQGIWPRR 308


>gi|228952335|ref|ZP_04114423.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228807331|gb|EEM53862.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 298

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 57/304 (18%), Positives = 121/304 (39%), Gaps = 31/304 (10%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPV 98
           M  QI I+ +FA    +++G  G++S    + + IGAY   +L  R      +  + I  
Sbjct: 1   MFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFLIGIVA 60

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++S     I+GL SL+ +  + A+ TL +S++F  +  KW+ +T+G  G        F
Sbjct: 61  AIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPEIF 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                    YYV L        ++    +++I    + I  N++
Sbjct: 121 RDRF-------------------TFYYVSLVCLCFIFILLRLFTKSSIGKVLKAISQNEQ 161

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   ++  K+ A  V+     ++G  F  +   ++  +F     +  + + ++GG+
Sbjct: 162 RVEALGYKVLHYKIIASVVAGIVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGV 221

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L      + I+  +      +   Y             R T ++ +   +V+L+    
Sbjct: 222 GTLIGAIAGSGIIESLKYYLSELATEY---------PIFERWTIILGLLYIIVLLVFPKG 272

Query: 339 LLRL 342
           L+  
Sbjct: 273 LVGT 276


>gi|326693763|ref|ZP_08230768.1| branched chain amino acid ABC transporter permease [Leuconostoc
           argentinum KCTC 3773]
          Length = 292

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 103/303 (33%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GAY          L+ ++ + +
Sbjct: 8   LLNGVILGSVYALLALGYTMVYGIIKLINFAHGDVYMLGAYFGYFFIKILHLNFFVALIL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++S   G+++ L + +       IA LI +     +L        G            
Sbjct: 68  SMIVSAGVGVLIELIAYRPLRHSPRIAVLISALGVSFLLENGMSYAVGSD---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I   ++    +        ++     L  ++ L +++T +  A R +  +Q+
Sbjct: 118 -KRAFPQAIATVQYHVGQLQISNIQLLIIGTAVILMLALTLIVQKTKMGRAMRAVSADQE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA     G       + I P M   +  I      +LG +
Sbjct: 177 AAVLMGINVNRTISFTFAIGSALAAAGGVLIGLYYNNIDPLM-GMTPGIKAFVAAVLGAI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        ++  +  L   +               +     ++   L L++L +   
Sbjct: 236 GIIPGAVLGGWLIGILETLTQAVG-------------LSDYKDAVVYGILILILLWKPTG 282

Query: 339 LLR 341
           +L 
Sbjct: 283 ILG 285


>gi|220912001|ref|YP_002487310.1| inner-membrane translocator [Arthrobacter chlorophenolicus A6]
 gi|219858879|gb|ACL39221.1| inner-membrane translocator [Arthrobacter chlorophenolicus A6]
          Length = 322

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 59/307 (19%), Positives = 122/307 (39%), Gaps = 6/307 (1%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
               Y M A GL++  G  GLL+       A+GAY + I    +G+  ++ + ++   S 
Sbjct: 18  TTAAYAMAALGLAVHFGYSGLLNFGQAGFMAVGAYGFAISTLTFGVPFFVGLLIAIAASA 77

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
              +++G+P+L+ R DYLAI T+  +EI + I+   +      +   +A           
Sbjct: 78  VFALLLGIPTLRLRADYLAIVTIAAAEIVRYIVTTNQLTAVTGSANGLAAFEGSFYAMNP 137

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
                +   ++   +   + + L+ +C     ++    R+      + IR+++ A  SL 
Sbjct: 138 FPEGSYFGMNNRDFFIRVVGWALVAICCTLVWLL---MRSPWGRVLKGIREDENAVRSLG 194

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
             +   K+ A  +      +AG  F   R  + P  +       + + ++LGG+ ++   
Sbjct: 195 KNVYAYKMQALVIGGVLGALAGMIFTLPRGAVQPANYGTELTFFLYTCLLLGGLGTVLGP 254

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDC---SFNMRHTTLMVIALFLVILMRSHSLLR 341
                I   V+ L  G+ +    S                 L+ +AL L+++ R   +  
Sbjct: 255 VIGAMIFWVVLSLTQGILYGLIESGAVTWLNTVQAGQLRYILVGVALMLLMIFRPQGVFG 314

Query: 342 LRTPSNF 348
            +    F
Sbjct: 315 NKKELAF 321


>gi|288930484|ref|YP_003434544.1| inner-membrane translocator [Ferroglobus placidus DSM 10642]
 gi|288892732|gb|ADC64269.1| inner-membrane translocator [Ferroglobus placidus DSM 10642]
          Length = 335

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 60/302 (19%), Positives = 110/302 (36%), Gaps = 37/302 (12%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y   +    L + + A     +   +GL+SL   + + IGAY+   L + + L I++ IP
Sbjct: 54  YYLRVLNIALSFAILAASWDFLANYVGLVSLGHALFFGIGAYTAGALSAYFDLPIFVTIP 113

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           ++ +  GA    +  P+LK RG Y ++ TL    +    LI+   I  G  GI   +   
Sbjct: 114 LATLAGGAISTALIYPTLKVRGIYFSLITLAFPLLLAR-LIEATDILGGTLGITDVEGFP 172

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                                      Y+L+    +    +  L    +    R I+DN 
Sbjct: 173 NPWIES---------------------YLLIFSLIVVVFGLRRLLGEDLGIVLRAIKDND 211

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +    +   +  A  +SSA     GA+ A S   +         +I  I+  ++GG
Sbjct: 212 LTVEASGINVNKYRAVAVFISSAIASFVGAYTAHSYMFVGLPYLNLEYSIFPIAATVVGG 271

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           M+S++  A    +L+ + E+                         +  + L L I +R  
Sbjct: 272 MSSIAGAAIGAFVLVPLSEMLREF---------------GTLRIAIYSLLLMLFIALRPE 316

Query: 338 SL 339
            +
Sbjct: 317 GI 318


>gi|146279301|ref|YP_001169459.1| ABC transporter related [Rhodobacter sphaeroides ATCC 17025]
 gi|145557542|gb|ABP72154.1| ABC transporter related [Rhodobacter sphaeroides ATCC 17025]
          Length = 313

 Score = 87.2 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 120/326 (36%), Gaps = 29/326 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++  LL    + A   + ++  +  + LI+ + A  L +++G   ++S        
Sbjct: 9   VMAGLLLLLLPMPAVFAALGEPFLTVVLTRALIFAIAALSLDLILGFGAMVSFGHAAYLG 68

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY+  IL +     +   +PV+ + +G   ++ G  SL+ RG +  + TL   ++   
Sbjct: 69  IGAYAAGILAANGITGLEWQMPVALVAAGIFALVTGAISLRTRGVHFIMITLAFGQMAYF 128

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           ++                         +    R   F +      +  +Y +L +     
Sbjct: 129 LMSSLSAYGG--------------DDGMTLAARSTLFGAEPFNGTLRFFYTVLALLAALW 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  + R+         R+N+    ++  +    +L+A+A+S     +AG   A     
Sbjct: 175 LGLRAVTRSRFGRVLAGTRENETRMQAIGFSPFAYRLTAYALSGMIAALAGVLLANHAAF 234

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +SP    ++ +  +I++V+LGGM +L+         I   E       ++          
Sbjct: 235 VSPSYMGWARSGEMIAMVVLGGMGTLTGPVLGALAFILSEEALARFTTHW---------- 284

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                      A+ L +L     LL 
Sbjct: 285 -----RLPFGAAVVLAVLFTRGGLLG 305


>gi|171462842|ref|YP_001796955.1| inner-membrane translocator [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171192380|gb|ACB43341.1| inner-membrane translocator [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 309

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 62/323 (19%), Positives = 128/323 (39%), Gaps = 29/323 (8%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++Y +L+ + L             +++L + +FA   ++++G  GLLS      +   AY
Sbjct: 7   LLYGILVLIGLLLPFQDCIYLVFAMKVLCFALFACAFNLLLGFTGLLSFGHAAFFGTAAY 66

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
               L    G S  L I +    SG  G ++GL +++ +G Y A+ TL +S++   + ++
Sbjct: 67  ITAYLCKEAGFSPELGIVLGVAGSGVFGFLIGLLAIRRQGIYFAMVTLALSQMVYFLAVQ 126

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
               T G+ GI    R                F    +  ++ MYY +L +     ++I+
Sbjct: 127 LP-FTGGEDGIQGVPR-------------GMLFGFIGLKDDVAMYYFVLTVFLFGFALIM 172

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
               +      + IR+N+    SL   +   KL +F +S+A  G+AG+  +      +  
Sbjct: 173 RAVHSPFGQVLKAIRENEPRAISLGYDVDRFKLMSFVISAALSGLAGSMKSLVFQLATLT 232

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
              +  +  V+ + +LGGM ++        I++G+      +                  
Sbjct: 233 DAHWHMSGEVVLMTLLGGMGTIFGPVVGAGIVVGLQNYLANI---------------GSW 277

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
            T        + +L+    ++  
Sbjct: 278 STIATGFIFVICVLVFRRGVVGE 300


>gi|228907678|ref|ZP_04071535.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis IBL 200]
 gi|228852170|gb|EEM96967.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis IBL 200]
          Length = 298

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 57/304 (18%), Positives = 121/304 (39%), Gaps = 31/304 (10%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPV 98
           M  QI I+ +FA    +++G  G++S    + + IGAY   +L  R      +  + I  
Sbjct: 1   MFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFLIGIVA 60

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++S     I+GL SL+ +  + A+ TL +S++F  +  KW+ +T+G  G        F
Sbjct: 61  AIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPEIF 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                    YYV L        ++    +++I    + I  N++
Sbjct: 121 RDRF-------------------TFYYVSLVCLLFIFILLRLFTKSSIGKVLKAISQNEQ 161

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   ++  K+ A  V+     ++G  F  +   ++  +F     +  + + ++GG+
Sbjct: 162 RVEALGYKVLHYKIIASVVAGIVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGV 221

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L      + I+  +      +   Y             R T ++ +   +V+L+    
Sbjct: 222 GTLIGAIAGSGIIESLKYYLSELATEY---------PIFERWTIILGLLYIIVLLVFPKG 272

Query: 339 LLRL 342
           L+  
Sbjct: 273 LVGT 276


>gi|254469685|ref|ZP_05083090.1| urea ABC transporter, permease protein UrtC [Pseudovibrio sp.
           JE062]
 gi|211961520|gb|EEA96715.1| urea ABC transporter, permease protein UrtC [Pseudovibrio sp.
           JE062]
          Length = 380

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 53/350 (15%), Positives = 104/350 (29%), Gaps = 33/350 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             ++  + V    L+           YI  +  + L Y M A  L +V G  G+LSL   
Sbjct: 20  AIMMLAVLVPLFNLVVPAEHPLHIPGYIVGLMGKYLCYAMLALALDLVWGYCGILSLGHG 79

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +A+G Y+  +   R      +                 LP   +  D      L++  
Sbjct: 80  AFFALGGYAMGMYLMRQIGDRGVYAHPELPDFMVFLNWQELPWFWYGFDQFWFTALMILA 139

Query: 132 IFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRF 172
           +   +   +  +                          +  D  +     +        F
Sbjct: 140 VPGLLAFVFGYLAFRSRVTGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILGF 199

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
           P         ++        +S     ++ R+ +      +RD +     +   +   KL
Sbjct: 200 PLQAAETRAALFAATAVFLAISLVACSFVVRSKLGKVMLAVRDAESRTRFIGYRVEHVKL 259

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
            AF +S+   G+AGA +      I+P  F  + +I V+    +GG  +L        ++ 
Sbjct: 260 FAFILSAMIAGIAGALYVPQVGIINPGEFAPANSIEVVIWTAVGGRGTLIGPIIGAVLVN 319

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           G                  F  +F       +     +V L     ++ L
Sbjct: 320 GGKSY--------------FTAAFPDLWLFALGGLFIIVTLFLPKGIVGL 355


>gi|241763746|ref|ZP_04761794.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
 gi|241367051|gb|EER61436.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
          Length = 309

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 99/305 (32%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G + L++        IGA +          ++      
Sbjct: 8   IINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMIGALTSWSCIGLMQEAMPGAPGW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++       +   +L F  + +A   L  S     ++         +    +  +  +
Sbjct: 68  LILLLATIIACVVAATLNFVIEKVAYKPLRTSPRLAPLITAIGMSILLQTLAMIIWKPNY 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+    F     +       +L       AS++  +  T +  A R   +N +
Sbjct: 128 --KPYPTLLSSTPFQVGGAVITSTQILILGVTVVALASLMYLVNYTKLGRAMRATAENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + F + +    +AG  +A++       M  F   +   +  + GG+
Sbjct: 186 VASLMGVKPDMVISATFIIGAVLAAIAGIMYASNYGTAQHTM-GFLPGLKAFTAAVFGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  +  G        LL      +        I L +++ +R   
Sbjct: 245 GNLAGAVVGGILLGLIEAIGSGYIGTLTGGLLG-----SHYTDIFAFIVLIIILTLRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|146312138|ref|YP_001177212.1| inner-membrane translocator [Enterobacter sp. 638]
 gi|145319014|gb|ABP61161.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Enterobacter sp. 638]
          Length = 304

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 88/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P+
Sbjct: 9   LINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLSAIGLALLAWFGLESFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    + +                   + +   I      +               
Sbjct: 69  LILGTLVFTIFVTGVYGWTIERIAYKPLRNSTRLAPLISAIGMSLILQNYAQISQGPRQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+   +  F     FV       ++L+        +   +  T +    R ++ ++K
Sbjct: 129 GVPTMLDGVFRFHIGEGFVQVTYTKVFILIASFAGMLLLTWIISNTRLGRMCRAVQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A  G+AG     +       +  F   I   +  +LGG+
Sbjct: 189 MASILGINTDRIISLVFVIGAAMAGLAGVLITMNYGTFDFYV-GFVIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL        GM    +  +  F               L ++++ R   
Sbjct: 248 GSLPGAMLGGLILGIAEAQFSGMVNSDYKDVFSFG-------------LLVVILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|218896903|ref|YP_002445314.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus G9842]
 gi|218543201|gb|ACK95595.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus G9842]
          Length = 298

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 55/313 (17%), Positives = 120/313 (38%), Gaps = 31/313 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLIPV 98
           M  QI I+ +FA    +++G  G++S    + + IGAY   +          +  + I  
Sbjct: 1   MFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFLIGIVA 60

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++S     I+GL SL+ +  + A+ TL +S++F  +  KW+ +T+G  G        F
Sbjct: 61  AIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPEIF 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                    YYV L        ++    +++I    + I  N++
Sbjct: 121 RDRF-------------------TFYYVSLVCLCFIFILLRLFTKSSIGKVLKAISQNEQ 161

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   ++  K+ A  V+     ++G  F  +   ++  +F     +  + + ++GG+
Sbjct: 162 RVEALGYKVLQYKIIASIVAGVVASISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGV 221

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L      + I+  +      +   Y             R T ++ +   +V+L+    
Sbjct: 222 GTLIGAIAGSGIIESLKYYLSELATEY---------PIFERWTIILGLLYIIVLLVFPKG 272

Query: 339 LLRLRTPSNFLER 351
            +         +R
Sbjct: 273 FVGTVKKLKSFKR 285


>gi|330976758|gb|EGH76796.1| inner-membrane translocator [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 359

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
           + +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      M L  L      L           + +     
Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDHFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  S       ++   + +   S  I 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISAQGTRAALFMATVALLVASLYIG 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTMAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     +V L     ++ +
Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGM 352


>gi|222081064|ref|YP_002540427.1| branched-chain amino acid ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221725743|gb|ACM28832.1| branched-chain amino acid ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 297

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 51/307 (16%), Positives = 108/307 (35%), Gaps = 19/307 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            ++  + I   +Y + A  L++  G  GL++   V  +  G Y   I   +Y L     I
Sbjct: 3   DFLIHVTILACLYSLVALSLNLQSGFGGLMNFGQVALFGCGTYGAGI-AYKYDLGFASGI 61

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++A  +   G          + DY  +ATL ++E+ + I+      T G  GI     L
Sbjct: 62  VIAAAFAVFVGWAFAAIGRNLQEDYWGMATLALAEVIRIIVNNEGWFTGGAQGISPVSPL 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           +                 +  + ++ +      +  ++  +  WL         +  R+ 
Sbjct: 122 FP--------------SLAGRMQQVAILCSCAALLTVAYILCRWLTDGRYGLGLKMSREE 167

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +   SL   +   +     +S      AG  FA     ++P+    SE  ++ ++VI+G
Sbjct: 168 PQLALSLGYNVAALRRECMILSGLVAASAGFVFAHYISFVAPEQLVSSETFLIWAMVIIG 227

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +         +L  +         ++ + +             ++   L   +L R 
Sbjct: 228 GIGNHRGAIVGACLLQFIF----SFIPFFKDLVGLPTEFVAAARLVMIGGGLIAFMLWRQ 283

Query: 337 HSLLRLR 343
             L+  R
Sbjct: 284 SGLVPER 290


>gi|221068589|ref|ZP_03544694.1| inner-membrane translocator [Comamonas testosteroni KF-1]
 gi|220713612|gb|EED68980.1| inner-membrane translocator [Comamonas testosteroni KF-1]
          Length = 330

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 128/302 (42%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             ++++ + +FA   ++++G  GLLS          AY        +G +  + + +  +
Sbjct: 34  FVMKLMCFALFASAFNLLLGYTGLLSFGHAAFLGGAAYVAGYSIKAWGFTPEIGMLLGTL 93

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           +    G+I G  +++ +G Y ++ TL ++++   + ++    T G+ G+    R      
Sbjct: 94  VGALLGLIFGWLAIRRQGIYFSMITLALAQMLFFVALQA-KFTGGEDGLQGVPR------ 146

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F    +  ++ MYYV L +   +  +I+    +      + I++N+    
Sbjct: 147 -------GKLFGVIDLSSDMVMYYVALVIVVAAFLLIVRTIHSPFGQVLKAIKENEPRAI 199

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   KL AF +S+A  G+AG+         +     ++ +  VI + ++GG+ +L
Sbjct: 200 SLGYDVNRFKLLAFVISAALTGLAGSLKTLVLGFATLSDVHWTTSGHVILMTLMGGLGTL 259

Query: 282 SKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           S     +A+++ +      +  +    + +++  +     T +  +   L +L+    ++
Sbjct: 260 SGPLLGSAVVVALENKIGEVGTFLAHTTGVEWFGTLGESVTIVTGLIFVLCVLLFRKGIM 319

Query: 341 RL 342
             
Sbjct: 320 GE 321


>gi|298488923|ref|ZP_07006947.1| Urea ABC transporter, permease protein UrtC [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|298156598|gb|EFH97694.1| Urea ABC transporter, permease protein UrtC [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
          Length = 359

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 53/324 (16%), Positives = 99/324 (30%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
           + +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      + L  L      L           + +     
Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWALCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  S       ++   + +   S  I 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRATLFLATVLLLIASLYIG 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++  S     +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WRLAQSKFSRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAILCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     +V L     ++ L
Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGL 352


>gi|241762794|ref|ZP_04760858.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
 gi|241368213|gb|EER62405.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
          Length = 322

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 69/338 (20%), Positives = 128/338 (37%), Gaps = 34/338 (10%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++L+++D    +L  V  +LL L          +  +     I+ +FA G   V GSLG+
Sbjct: 1   MKLSRFDIYFGILLAVAGILLPLLRPGEA----LIQLVTLAAIWAVFAVGFDFVFGSLGM 56

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           +S        +G Y+  +   +YGL  +    ++  +  A  +     +L+  G + A+ 
Sbjct: 57  VSFGHATFLGVGGYAVALATQKYGLPFFCGAGIAIAVGAAFALFFSFFALRVSGIFFALV 116

Query: 126 TLIMSEIFQNIL-IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           TL +S++   +   K +  T G  GI   +R                F        I  Y
Sbjct: 117 TLALSQLIFILADSKLRGFTGGSDGISGVERP--------------GFLGIDFYDPINFY 162

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           + +LG+  L    ++ LR +    A   IR N+     L   +   K   F +S A  G+
Sbjct: 163 WFVLGVYALVMLAVISLRSSPFGRAIAAIRSNETRADQLGFNVNRYKQITFVISGALSGL 222

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA  A+    ++P M  ++ +  VI + +LGG  SL        +   + E       Y
Sbjct: 223 AGALLASLLMYMNPQMLHWTTSGDVIIMTLLGGSGSLWGATVGVIVFEILKEWLSSWTEY 282

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           ++                ++     L  +     ++  
Sbjct: 283 WYG---------------VLGTVFILATIFFPRGIVGE 305


>gi|213967979|ref|ZP_03396125.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301383706|ref|ZP_07232124.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302131591|ref|ZP_07257581.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213927322|gb|EEB60871.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
          Length = 359

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
           + +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      M L  L      L           + +     
Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  +       ++   + +   S  I 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSITSQGTRATLFLATVVLLVASLYIG 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WKLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     +V L     ++ L
Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGL 352


>gi|317046827|ref|YP_004114475.1| urea ABC transporter permease UrtC [Pantoea sp. At-9b]
 gi|316948444|gb|ADU67919.1| urea ABC transporter, permease protein UrtC [Pantoea sp. At-9b]
          Length = 358

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 57/346 (16%), Positives = 103/346 (29%), Gaps = 27/346 (7%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I  LL ++    L           Y  ++  +IL Y + A  L +V G  GLLSL   +
Sbjct: 23  IIALLLLIMPFFALLPASHPLALSTYTLTLVGKILCYAIVAVALDLVWGYAGLLSLGHGL 82

Query: 73  AYAIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            +A+G Y   +                   W  +P     +      + L  L      L
Sbjct: 83  FFALGGYGMGMYLMRQASGDGLPAFMSFLSWNELPWFWAGTQHFAWALCLIVLVPGLLAL 142

Query: 123 AIATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
                      +     ++       G    +  +  +              F  +    
Sbjct: 143 VFGFFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFNVTATST 202

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
            I ++   + +  +S  +   L R+        +RD +     +       KL  + +S+
Sbjct: 203 RIGLFVATVLLLLVSIGVGFALARSKFGRVLTAVRDAENRLMFIGYDPRGFKLFVWTLSA 262

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
              G+AGA +      I+P     + +I     V LGG  +L       AI+ G      
Sbjct: 263 VLCGLAGALYVPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPLLGAAIVNGAKSW-- 320

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                       F  +F       + +   LV L     ++ L   
Sbjct: 321 ------------FTVAFPEYWLFFLGLMFILVTLFLPRGVIGLWRR 354


>gi|220919841|ref|YP_002495144.1| ABC transporter related [Methylobacterium nodulans ORS 2060]
 gi|219952261|gb|ACL62652.1| ABC transporter related [Methylobacterium nodulans ORS 2060]
          Length = 859

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 102/309 (33%), Gaps = 34/309 (11%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
             QI IY ++  G++ ++G LGL+       +    Y+  I     G S    + ++A  
Sbjct: 40  ITQIAIYTLYGAGVNFLIGYLGLVPFGASFFFGCAGYALAITSGALGGSEISGLVIAAGF 99

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++G   L+ RG Y ++ TL  S+I   +  KW  +T G+ G+    R  F    
Sbjct: 100 ALILAALVGSVILRRRGLYFSLLTLACSQIAFEVAFKWTSVTGGENGLQNVLRPLFPSA- 158

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                             +  +   + +       +  L         + +RDN++   S
Sbjct: 159 ------------------LAFHAFTVAVVLGLLWGLWRLAHAPFGRLMQALRDNEQRVVS 200

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L       KL A  ++   IG+ G   A     +  +   +      + +  LGG+    
Sbjct: 201 LGYDTYRTKLIALTIAGGVIGVGGGLMALLLQGVYANNLDWQHAGDAVLMAALGGVHHFL 260

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  + I + +    +   ++                +    + +  L+    +  +
Sbjct: 261 GPLWGAIVFIVLEDRLSAITENWW---------------LIFAPLIIVFALLSPEGIQGI 305

Query: 343 RTPSNFLER 351
                   R
Sbjct: 306 FQRLVGRNR 314


>gi|218234219|ref|YP_002366652.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus B4264]
 gi|218162176|gb|ACK62168.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus B4264]
          Length = 333

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 59/325 (18%), Positives = 128/325 (39%), Gaps = 31/325 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 15  VCMLICLSGFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  R      +  + I  + ++S     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 75  VALLFDRQGVSITNFLIGIVAAIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YYV L    +   +
Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L  +    
Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
            R T ++ +   +V+L+    L+  
Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGT 311


>gi|328881683|emb|CCA54922.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Streptomyces venezuelae ATCC 10712]
          Length = 321

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 95/307 (30%), Gaps = 12/307 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY--SYVILGSRYGLSIWLLI 96
           + +  +   +Y + A G ++V G + L++      +  G +    V L    G ++W+ +
Sbjct: 20  LVNGLLLGSMYGLVAVGYTMVYGIVQLINFAHGEIFMTGGFGALTVWLILPGGTTMWVAL 79

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P+  + +      + + + +     L     +        LI    ++        A   
Sbjct: 80  PLMIVGAVLVATTIAVGAERLAYRPLRGGPRLAP------LITAIGLSLALQQAVWAFYP 133

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     I         V  +    ++L+      A +  ++ RT      +    +
Sbjct: 134 EAKSARTFPQIPGGPIELGPVTIQTGDVFLLIAAPICMAFLAFFVMRTRTGRGMQATAQD 193

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 +        + AFA+ +A   +    +      +   M  F   +   +  +LG
Sbjct: 194 PDTAKLMGVNTDRIIVIAFALGAAMAAVGAVAYGLKYGVVDYKM-GFLLGLKAFTAAVLG 252

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++        +L     +      +          S+         + L +V+L R 
Sbjct: 253 GIGNIYGAMIGGVVLGVAETMATAYVSHIPGMEQLGGQSWADVWA---FVLLIVVLLARP 309

Query: 337 HSLLRLR 343
             LL  R
Sbjct: 310 QGLLGER 316


>gi|318604902|emb|CBY26400.1| urea ABC transporter, permease protein UrtC [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 358

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 57/350 (16%), Positives = 105/350 (30%), Gaps = 27/350 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           L L+    +  LL ++  L L           Y  ++  +IL Y + A  L +V G  GL
Sbjct: 16  LSLSLAGIVTILLIILPFLALLPADNPLAISTYTLTVVGKILCYAVVAIALDLVWGYAGL 75

Query: 66  LSLNCVIAYAIGAYSYVILG----------SRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           LSL   + +A+G Y+  +            S      W  +P     S     ++ L  +
Sbjct: 76  LSLGHGLFFALGGYAMGMYLMRQAAGDGLPSFMSFLSWSELPWFWSGSQYFIWVLCLIVV 135

Query: 116 KFRGDYLAIATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
                             +     ++       G    +  +  +              F
Sbjct: 136 VPGLLAFIFGYFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTMLGF 195

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
             S     I ++   L +   S ++   + R+        +RD +             KL
Sbjct: 196 SVSATSTRIALFLATLALLIASLALGFAVARSKFGRILTAVRDAENRLTFCGYDPKGFKL 255

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             + +S+    +AGA +      I+P     + +I     V LGG  +L        I+ 
Sbjct: 256 FIWTLSAVLCALAGALYVPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGIVN 315

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           G                  F  +        + +   LV L     ++ L
Sbjct: 316 GAKSW--------------FTMAMPEYWQFFLGLIFILVTLFLPKGVIGL 351


>gi|254525468|ref|ZP_05137520.1| urea ABC transporter, permease protein UrtC [Prochlorococcus
           marinus str. MIT 9202]
 gi|221536892|gb|EEE39345.1| urea ABC transporter, permease protein UrtC [Prochlorococcus
           marinus str. MIT 9202]
          Length = 376

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 49/358 (13%), Positives = 108/358 (30%), Gaps = 35/358 (9%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           MS+  ++L+K      +L+    L+  +    T    +  ++  + L   + A G+ ++ 
Sbjct: 1   MSLSKIKLDKK----IILSFWIILIALVIAAPTLLPVFRLNLLGRYLSLSIVALGVDLIW 56

Query: 61  GSLGLLSLNCVIAYAIGAYSYVIL-----------------GSRYGLSIWLLIPVSAMIS 103
           G  GLLSL   I +A+G Y   +                         +         + 
Sbjct: 57  GYTGLLSLGQGIFFALGGYCAAMYLQITSSSEFPNNIPEFFALYGVEKLPFFWEPFRSLV 116

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
                I  +P+L        +    +  ++ +IL +   +            +       
Sbjct: 117 YTFFAIWIIPALVAGLIGFLVFRNRIKGVYFSILTQASLLVFFNFFNGQQKLINGTNGLK 176

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
             + + F         +   +++   +   S     WL +    N    IRD++      
Sbjct: 177 TDVTQLFGQMVGSESMQRIFFWITAILVIASWFFAKWLVKGRFGNILIGIRDDEPRVRFT 236

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
               +  K   F+++    G++GA +      +SP       +I ++  V +GG  +L  
Sbjct: 237 GYNPVIFKTIIFSIAGGLAGISGALYTVQSGIVSPQFMTVPFSIEMVIWVAVGGRGTLLG 296

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  +     L                 +       +      LV+      +L 
Sbjct: 297 AILGAVFINYAKSLVSE--------------ALPASWMFIQGGLFILVVTALPEGVLG 340


>gi|284045826|ref|YP_003396166.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283950047|gb|ADB52791.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 355

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 49/308 (15%), Positives = 104/308 (33%), Gaps = 8/308 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
                   LIYV     L +  G+ G++S   V   AIGAY+  +L    GL    L  +
Sbjct: 31  FQRTVTTALIYVTAVVALYVFAGNSGIVSFGHVAFMAIGAYTAGLLTIPSGLKQVTLPNL 90

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              I+           +      L    + +       L          + + +   +  
Sbjct: 91  YGFIANTTVSADVALLIGGVVAALFALVVAVPL---MRLNGIAAAIGTFSLLVIVYVVAG 147

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +  +      + V  E+ + +++L       ++    + +      R+ R+   
Sbjct: 148 NWYDLTNGTQTLVGVPAVVDIEMALPWLILV-----LALAFAYQESRWGRRLRSTREELL 202

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  +    +   +  AF +S+   G+AG           P  F F    + ++++I+GG+
Sbjct: 203 AAQATGVRVAKERTIAFVLSAFCAGVAGGLLGLFLGAFGPQQFYFDLTFLTVAMLIIGGL 262

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SLS       ++  + EL      +  + L             L+   +  ++++R   
Sbjct: 263 RSLSGAVVGALVVATLSELLTRFEEHGIDVLGVGVHPRPGLREILLAALMLTILVLRPQG 322

Query: 339 LLRLRTPS 346
           +   R  S
Sbjct: 323 ITGGRELS 330


>gi|167721839|ref|ZP_02405075.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, ATP-binding/permease protein [Burkholderia
           pseudomallei DM98]
          Length = 315

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 47/327 (14%), Positives = 117/327 (35%), Gaps = 22/327 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V   +L    GA +  +Y  ++   I +Y + A GL ++ G  G+ S       
Sbjct: 9   AFWLFLVALFVLPALPGAARVPEYWITLLNYIGLYAIVAVGLVLLTGIGGMTSFGQAAFV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY+   L + YG+S WL +    +++    +++G+ +++  G +L + T+       
Sbjct: 69  GVGAYATAFLTTAYGVSPWLGLIAGVVLTALVALVLGVVTMRLSGHFLPLGTIAWGLALF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +        +     F                        +YY++  +   +
Sbjct: 129 FLFGNLDWLGKYDGINGIPALALFGHAFDTGR---------------SLYYLIWIVVLAA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L  +    A R +R       ++     + ++  F  ++    ++G  +A  + 
Sbjct: 174 IVSVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWLRVVIFVYAAVLASISGFLYAHLQR 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F  S  I  + + ++GG+  +       AI+  + +    +      +   F  
Sbjct: 234 AVNPTPFGLSHGIEFLFMAVVGGVAHVWGAVLGAAIVTVLQDYLQTLLPKLLGAEGNF-- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  + + L++      +  
Sbjct: 292 -----EIIVFGVLMVLLLQYARQGVWP 313


>gi|84503099|ref|ZP_01001195.1| hypothetical protein OB2597_01462 [Oceanicola batsensis HTCC2597]
 gi|84388643|gb|EAQ01515.1| hypothetical protein OB2597_01462 [Oceanicola batsensis HTCC2597]
          Length = 382

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 53/354 (14%), Positives = 106/354 (29%), Gaps = 42/354 (11%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  +++ L L    +  +  +   + L+Y M    +++  G  G+L+L   + + +GAY 
Sbjct: 16  VLFIVIVLGLPLVMTDVFWLNRIAKYLVYGMLGIAIALSWGYAGILNLGQGLFFGLGAYM 75

Query: 81  YVILGS--------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
             +                      +W   P +            L        +     
Sbjct: 76  VAMSLKLQSYTSLQQGSENPVPDFMLWNAEPGAPTELCCITSGSWLWLPFQAQGFGMAMA 135

Query: 127 LIMSEIF----------------QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
           +I+  I                    +I    +   +  I  A  +      +  L    
Sbjct: 136 IILPVIVALILSSAIFRLRVSGVYVAIITLALVLLVRLLIIDAQPVTNGFNGLTDLGWLT 195

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                F  Y +  YY++     +      WL  T      ++ RD+      L   +   
Sbjct: 196 IGGVEFDPYLVSTYYIVAVSICVVLLATRWLVSTRAGLILQSTRDDPNRSRYLGYDVAAY 255

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           ++  F VS+   G AG  +  + +  SP     S +I ++    +GG +SL   A    +
Sbjct: 256 QVFFFTVSAGIAGFAGMLYVIAAEFASPSFLDISFSISMVVWAAVGGRSSLIGAAIGAIL 315

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +  +                     F      ++ +   LV+L     L  L  
Sbjct: 316 INTIEATASE------------TEMFQEAWKLIIGVIFVLVVLYMPRGLAGLAE 357


>gi|224369599|ref|YP_002603763.1| LivM4 [Desulfobacterium autotrophicum HRM2]
 gi|223692316|gb|ACN15599.1| LivM4 [Desulfobacterium autotrophicum HRM2]
          Length = 436

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 106/331 (32%), Gaps = 24/331 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +  ++    V       +         Y   +    ++ V+    ++I+ G  G  S + 
Sbjct: 97  HLPLVIATLVHLAAFYGVLHIWADINDYRVLVLKLTMVSVILTISINIINGYQGEFSCSH 156

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A+GAY+   L   +       +  +A++    G  M           L     + S
Sbjct: 157 PGFMALGAYTSSALTLLFFADD--KLFGAALLPAWLGPWMFPLI-------LIAGGFVAS 207

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                + I           I     ++ + + + +L                   V+   
Sbjct: 208 IGSLVVAIPSFRTRGDYLAIISLAFMFIVKSAIENLEVLGGPRGMSSQPNYASLPVVFAW 267

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +S  II     + +  A   +RDN+ A  S+       K++AF   + + G+AG  FA
Sbjct: 268 MAISIWIINNFVSSTMGKALNAVRDNEPAADSMTVNTRKTKMTAFMFGAFWAGIAGGLFA 327

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                ++P  F   +   ++++V  GG+ S+         +  + E    +  + +  + 
Sbjct: 328 HVLRYVNPATFGIQKLAEILAMVYFGGLNSIWGSIVGAVSISVLGEALRPLELFKWIIIP 387

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                               V+L R H L+ 
Sbjct: 388 LILIL---------------VMLFRPHGLIS 403


>gi|167618989|ref|ZP_02387620.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis Bt4]
          Length = 401

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 48/347 (13%), Positives = 98/347 (28%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 58  IAVGIGVPLAALVAPESSAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 117

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 118 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLAPA 177

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            Y  +  +          R   F  +
Sbjct: 178 ALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 237

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  ++ + +     S      +  + +      IRD +     L  + +  KL  +
Sbjct: 238 SPGTRCALFLITVAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 297

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+   G+AGA +      I+P     + +I +   V +GG  +L         + G  
Sbjct: 298 VVSAVLCGIAGALYVPQVGIINPSEMSPANSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 357

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +                  F       + +   LV L+    ++ L
Sbjct: 358 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 390


>gi|218781637|ref|YP_002432955.1| branched-chain amino acid ABC transporter permease
           [Desulfatibacillum alkenivorans AK-01]
 gi|218763021|gb|ACL05487.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 435

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 64/349 (18%), Positives = 135/349 (38%), Gaps = 40/349 (11%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            V    +F      +   Y  S+ + I  Y M A G+ +++G  GL++L      A+GAY
Sbjct: 80  WVLYPFVFALFLLYRLPDYYLSVMVMIGYYGMGALGVQLLIGYTGLITLGHAAFIAVGAY 139

Query: 80  SYVILGSRYGLS---------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
              ++   +              + I V+ + +G   ++ GLPS K +G YL + T+   
Sbjct: 140 VSALMVLYFHWPQFILDAGLAYPISIVVAGVFAGLWSVLFGLPSAKVKGFYLILTTMAAQ 199

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            I  + ++       G  G   +     +                 +  ++ +Y+++  +
Sbjct: 200 FITVDFILTQYVAQIGGRGQAFSLPPGTIKVGPW-----------VIDSDVKIYFLMAFI 248

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L  + +  L R+    AW  IRDN  A  ++   I+  KL AF V+    G+ GAF+ 
Sbjct: 249 LTLMVAFVANLFRSRAGRAWVAIRDNDIAAETMGINIVQYKLLAFFVAGFLGGVTGAFWL 308

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG---------- 300
           ++   +SP+ F +  ++ ++ ++++GG+ S+         ++ + E              
Sbjct: 309 SNTAALSPEHFPWFLSLWLVGVILIGGVGSIHGAILGALFMVILTESLQWSVIPLTDYYD 368

Query: 301 ----------MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
                     +       + K    F      +  +A+   ++   + L
Sbjct: 369 EVADTLNPGQLKNILDWLVPKLLMDFAYIKDMVFGLAICAFLIFEPNGL 417


>gi|239816980|ref|YP_002945890.1| urea ABC transporter permease [Variovorax paradoxus S110]
 gi|239803557|gb|ACS20624.1| urea ABC transporter, permease protein UrtC [Variovorax paradoxus
           S110]
          Length = 405

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/355 (12%), Positives = 96/355 (27%), Gaps = 37/355 (10%)

Query: 11  YDKILCLLAVVYPLL-----LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +      L VV  +      +           Y  ++  +I+ Y + A  + ++ G  G+
Sbjct: 18  WTAFFVALIVVCAVAPVLNMVVPAGSPLHMSDYAVALVGKIMCYAICALAMDLIWGYTGI 77

Query: 66  LSLNCVIAYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIM 110
           LSL   + +A+G Y   +                        W  +P     S +    +
Sbjct: 78  LSLGHGLFFALGGYMMGMYLMRQIGRDGNYKSDLPDFMVFLDWKTLPWHWTFSDSFIATL 137

Query: 111 GLPSLKFRGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
            L                           +I            +  +  +          
Sbjct: 138 VLIVAVPGLIAFVFGFFAFRSRIKGVYFSIITQAMTFAAMLLFFRNETGFGGNNGFTDFK 197

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
           R    P +     + ++ +             WL  +      + IRD +          
Sbjct: 198 RILGIPIATQEMRMTLFALTGLTLLGFFLFAKWLIASKFGRVLQAIRDAETRVMFSGYNP 257

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
           +  KL+ + +S+   G+AGA +      I+P     + +I +     +GG  +L      
Sbjct: 258 LPYKLTIWVISAVMCGVAGALYVPQVGIINPGEMSAANSIEIAIWAAVGGRATLIGPIIG 317

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             I+ G                     ++       +      V L   + ++ L
Sbjct: 318 AFIVNGAKSWLT--------------VAYPEYWLYFLGAVFIAVTLFLPNGIVGL 358


>gi|88601639|ref|YP_501817.1| inner-membrane translocator [Methanospirillum hungatei JF-1]
 gi|88187101|gb|ABD40098.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Methanospirillum hungatei JF-1]
          Length = 325

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 64/334 (19%), Positives = 127/334 (38%), Gaps = 28/334 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
            AV+  ++  L      S +Y  ++ I +LI++++A   + +    G  SL     + +G
Sbjct: 13  FAVLAFIVAILLPVIVGSNQYYRTVLILMLIFIIYASAWNFLT-FSGQGSLGHAAFFGLG 71

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y   ++    G+ + + +   A ++   G+++G+  ++ R  +LA+ T   + I Q ++
Sbjct: 72  GYFSSLIAINSGIPLIIAVFAGACVTAGIGVLIGMTCVRLREWFLAMVTFGFAVIIQTLI 131

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                +L  +             PSS        YY +L +   S  +
Sbjct: 132 V--------------ISQLSPITGGWDGFAVPKLIPSSIPGSPNLEYYGILAIAVGSILV 177

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L ++ I  A   IR+N+    +     +  KL AF +SS    +AGA        IS
Sbjct: 178 FHLLLKSKIGLALAAIRENEMEAKASGINPVPFKLFAFGISSFITAIAGALEVCHFGYIS 237

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P++F    +   I   I GG+ +L+     T ++  + E    + F Y   ++       
Sbjct: 238 PEIFGTDISFWPIIYSITGGLGTLAGPIIGTIVISLLWEGLNALGFTYERFIVIGILLIL 297

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                                L+ L     +L+R
Sbjct: 298 TIIFL-------------PKGLVSLPERLQYLKR 318


>gi|148254024|ref|YP_001238609.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. BTAi1]
 gi|146406197|gb|ABQ34703.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 365

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 65/306 (21%), Positives = 119/306 (38%), Gaps = 16/306 (5%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIW 93
           S  +++++ I  LI  + A GL++++G  G  SL       +G Y+   +L     L + 
Sbjct: 46  SDYWLNAVLIPFLIMSLTALGLNLLMGYAGQASLGTGGFMLVGTYATYNLLLRLPELPLP 105

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + + +  +ISG  G+I GLPSL+ +G YL  +TL    + + +  ++   +N      ++
Sbjct: 106 VSLLLGGIISGLVGVIAGLPSLRIKGFYLVASTLATQFLLEWLFNQYGWFSNYSTSSSIS 165

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                                  +      Y + L    +  +I + L R+     W  I
Sbjct: 166 APRL-------------AILGRDLSSPAGRYLLTLATVAVVTAIAVRLVRSQTGRTWMAI 212

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSENIIVISI 272
           RD   A   +   +   KL AF VSS  IG+AGA +  A    +    F    +  V+  
Sbjct: 213 RDMDTAAAVIGIPVASGKLKAFFVSSLVIGIAGALWGFAYLGTVDARSFNLDRSFQVMFA 272

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           +I+GGM S+       A +I +  L   +        +      N +        +   +
Sbjct: 273 IIIGGMGSIVGNYLGAAFMILLPILLDHVGTRLLGGAIDAGQLENFQR-AFFGALIIWFL 331

Query: 333 LMRSHS 338
           +     
Sbjct: 332 IKEPRG 337


>gi|283853507|ref|ZP_06370748.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
 gi|283571088|gb|EFC19107.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
          Length = 297

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 94/305 (30%), Gaps = 22/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++      + +GAY      +   L   + + +
Sbjct: 10  LLNSLTLGSLYALVAIGYTMVYGILRLINFAHSEIFMLGAYFVFWGITLGHLPWPVAMVL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  ++ + G+++   + +   D   I+ LI S      L     +               
Sbjct: 70  AIAVTASLGVLVDQVAYRPLRDAPRISALISSIGVSFFLQNVAIVFFQA----------I 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                R            V       +V L    L   ++  + RT      R I  + +
Sbjct: 120 PREVYRPSWLENPILMGDVRVLPLTLFVPLLSLALMLGLVYIVYRTKTGLGMRAISKDIE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
             + +   +       F + SA    +G  +A    ++ P M             + GG+
Sbjct: 180 TSYLMGVPVNRVIAITFGIGSALAAASGIMWALRYPQLQPIMGTI-PGFKAFIAAVFGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L  +  +            + F             + L LV++++   
Sbjct: 239 GSIQGAVVGGLALGFIEIMT-----------VAFFPDLAGYRDAFAFVLLILVLMVKPTG 287

Query: 339 LLRLR 343
           L   R
Sbjct: 288 LFGER 292


>gi|163792998|ref|ZP_02186974.1| ABC transporter permease protein [alpha proteobacterium BAL199]
 gi|159181644|gb|EDP66156.1| ABC transporter permease protein [alpha proteobacterium BAL199]
          Length = 338

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 75/323 (23%), Positives = 136/323 (42%), Gaps = 22/323 (6%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L   L L       Y+  + I IL++       SI +G  GL+SL       IGAY  
Sbjct: 16  VLLAALLTLPLLGFSDYVLHIAISILLWAFVYTSWSI-MGRFGLVSLGHGAFLGIGAYGT 74

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG--DYLAIATLIMSEIFQNILIK 139
            +L + YGL+ W+ IP+S ++SG  G+++GLP  +F+    Y A+ TL ++E+ + +++ 
Sbjct: 75  TMLWNHYGLTPWVGIPISIVLSGILGLLIGLPCFRFKITGHYFALVTLALTEVARLLIVA 134

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
            +  T G  G+     +        S      F +     +   +Y+++G+  +   I  
Sbjct: 135 LRDHTGGSLGVTPVGMV--------SPENPVSFYALQFASKSVWFYIVVGVWLVGLLIWR 186

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            + R+ +  A   I   + A  S+   +   KL+   +S+A     GA +   +  I+P+
Sbjct: 187 AVDRSMLRYAMEAISQEEDASASVGINVTRTKLTVTVISAAMTAFGGAVYGQYQQYINPE 246

Query: 260 M-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + ++ ++  VI GGM           I I + E             L F   F+ 
Sbjct: 247 TVSGIAISLQIVFAVIAGGMFVQLGPTVGAVITILLGEGLR----------LGFGNQFHG 296

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
              T+  + L L I+     +L 
Sbjct: 297 LDVTIYGLMLILFIIYMPRGVLG 319


>gi|170750813|ref|YP_001757073.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831]
 gi|170657335|gb|ACB26390.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831]
          Length = 601

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 98/323 (30%), Gaps = 29/323 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             V     L L++       +  ++  + +IY + A  + ++ G  G+L+      + IG
Sbjct: 26  FVVAALAALALWIAPLFLDTFAVNVLTRSMIYAVLAVTVDLLWGFAGILTFGQAAFFGIG 85

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  ++ + YG +   +    A    A  ++                   +  +   I+
Sbjct: 86  AYATAMILTAYGATPLGIAAAIAAALVAPALLGLAVGWLSFYHRSTPLYASVISLVVPIV 145

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +     + G+     +  + F          F                +      +    
Sbjct: 146 VVQLIYSGGEWTGSSSGLVGFDVLPFEIEGYFR---------------LAALFLIVVTLA 190

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L R     A   +RDN+     L       ++   A  +   G+AG  FA +   ++
Sbjct: 191 AWILVRADAGRALVALRDNEARCAYLGLNPRRLQIRLTAALAGIAGLAGFLFANASGVVA 250

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+   F     ++  V LGG  +L      T  +  +     G                 
Sbjct: 251 PENAGFLFGTELVIWVALGGRGTLLGPVLGTVAIDYLAANLSG--------------DLP 296

Query: 318 MRHTTLMVIALFLVILMRSHSLL 340
                L+  A   +I++    L 
Sbjct: 297 FLWQLLLGTAFVAIIILLPGGLA 319


>gi|157371439|ref|YP_001479428.1| inner-membrane translocator [Serratia proteamaculans 568]
 gi|157323203|gb|ABV42300.1| inner-membrane translocator [Serratia proteamaculans 568]
          Length = 338

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 92/315 (29%), Gaps = 14/315 (4%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           L +      + + +      +Y + A G ++V G +G+++      Y I AY   I  + 
Sbjct: 32  LLIMDVFFLQQLINGLTLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIGLAL 91

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                    P+  + +    +++                   + +   I      +    
Sbjct: 92  LSFFGLQSFPLLILGTLVFTIVVTGVYGWVIERIAYKPLRNSTRLAPLISAIGMSLILQN 151

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                         T+   +    F    +       ++L+      A +   ++ T + 
Sbjct: 152 YAQISQGPRQQGIPTLLDGVFRLNFDGGVIQITYTKVFILVASLLGMAILTYIIQHTRLG 211

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
              R  + ++K    L           F + +A  G+AG     +       +  F   I
Sbjct: 212 RICRATQQDRKMASILGINTDRVISLVFVIGAAMAGLAGVLITMNYGTFDFYV-GFIIGI 270

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              +  +LGG+ SL        +L        GM    +  +  F               
Sbjct: 271 KAFTAAVLGGIGSLPGAMLGGLLLGVAEAQFAGMVNSDYKDVFSFG-------------L 317

Query: 328 LFLVILMRSHSLLRL 342
           L ++++ R   LL  
Sbjct: 318 LVVILIFRPQGLLGR 332


>gi|86359039|ref|YP_470931.1| branched chain amino acid ABC transporter permease [Rhizobium etli
           CFN 42]
 gi|86283141|gb|ABC92204.1| probable branched-chain amino acid ABC transporter, permease
           protein [Rhizobium etli CFN 42]
          Length = 334

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 58/336 (17%), Positives = 122/336 (36%), Gaps = 28/336 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            ++   +   LA +  ++    +G       + ++  +++   + A  L +V G  G+ +
Sbjct: 13  QHRRGYVSRDLASLIVIIAVAAIGYFAFPDNL-ALLTRMITIALLALSLDLVTGYCGVAT 71

Query: 68  LNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           L     +  GAY+  IL + Y      L++        A G++ G   L+  G    + +
Sbjct: 72  LGHAALFGSGAYAAGILSAHYGINDPLLMLLAGIAGGVASGLLSGAIILRAHGLPQLVLS 131

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           + +  +F     K    T G  G+        LG               F +Y    +++
Sbjct: 132 IALIHLFHEFANKASSWTGGSDGLSGIAPDPVLGF------------FEFDLYGRTAFFL 179

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
              +  +   ++  L R+      R I+ +     ++  +   A +  + +S A  G+ G
Sbjct: 180 GTALLLVVFVLLRLLVRSPFGMLCRAIKQDPLRIRAMGGSPKGALIRMYTISGAVAGVGG 239

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A  A S   +  D   F+++   + I++LGG  SL      T I +   +     N +++
Sbjct: 240 ALNAISTQVVGLDSLSFTQSAEALVILVLGGTGSLFGALSGTIIFMLFEDYVSAANPFHW 299

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                          T++   L  V+L     L   
Sbjct: 300 --------------LTMVGALLIAVVLFAPKGLYGT 321


>gi|72160482|ref|YP_288139.1| branched-chain amino acid ABC transporter permease [Thermobifida
           fusca YX]
 gi|71914214|gb|AAZ54116.1| branched-chain amino acid ABC transporter permease protein
           [Thermobifida fusca YX]
          Length = 374

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 54/318 (16%), Positives = 114/318 (35%), Gaps = 13/318 (4%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           +      T +      +    L+    A    ++ G +GLLS    + +A GAY  V+L 
Sbjct: 54  IPGLFEGTLNSPSTLHVLATCLVLGGLATSYDLLYGRVGLLSFGHALYFAAGAYLAVLLM 113

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
               L +     ++        +++G  SL+  G  LA+ TL  ++    ++++      
Sbjct: 114 GILELPLLWSALIAVASGTLLALVLGAISLRVSGIALAMVTLAFAQAGSILVVR------ 167

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                    R+      +             V+  + +Y++ +G   ++  ++ WL  T 
Sbjct: 168 ------DPGRMTGGEEGLSLNPDLVPDAFIGVVNTVNLYWLAVGYVVVALGVVWWLSATP 221

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +   W+ IR N++    L       KL+AF V+ A   + G  +      ++P +     
Sbjct: 222 VGRVWQGIRANEQRVSVLGVNPYPYKLAAFTVAGALASLGGVVYLVVSGGVTPAITTAEF 281

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVE-LCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
            + ++ +V LGG  +         +   V   L        F+ L     +   +   ++
Sbjct: 282 TLTLLVMVSLGGAGTRWGPLVGAVVYTYVDHRLLQLAASDVFDGLPAVVRAPLSQPLFIL 341

Query: 325 VIALFLVILMRSHSLLRL 342
                L++      L  L
Sbjct: 342 GTLFVLLVFFFPGGLAAL 359


>gi|330938382|gb|EGH42008.1| inner-membrane translocator [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 359

 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
           + +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      M L  L      L           + +     
Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  S       ++   + +   S  I 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRAALFLATVALLVASLYIG 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSTVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTMAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     +V L     ++ +
Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGM 352


>gi|260220659|emb|CBA28420.1| High-affinity branched-chain amino acid transport system permease
           protein braD [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 309

 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 100/305 (32%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G + L++        +GA +   +      S+      
Sbjct: 8   IINGLVLGSMYALIALGYTMVYGIINLINFAHGEVVMVGALTSWTIIGLMQESMPGTPGP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++       +   +L F  + +A   L  S     ++         +    +  +  +
Sbjct: 68  VILLIALVIACVVAAALNFVIEKVAYRPLRNSPKLAPLITAIGMSILLQTLAMIIWKPNY 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +  +L+       +  +       +L       A ++  +  T +  A R   +N +
Sbjct: 128 --KSYPTLLPGNPIDIAGAVITPTQVMILGVTAASLAVLMWLVNYTKLGRAMRATAENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + F + +    +AG  +A++       M  F   +   +  + GG+
Sbjct: 186 VAALMGVKPDVVISATFIIGAVLAAIAGVMYASNYGTAQHAM-GFLPGLKAFTAAVFGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  +  G        +L      +        I L +V+ +R   
Sbjct: 245 GNLAGAVVGALLLGLIEAIGAGYIGALTGGVLG-----SHYSDIFAFIVLIIVLTLRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|167841010|ref|ZP_02467694.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia thailandensis MSMB43]
          Length = 308

 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 48/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G S+V G +G+++      Y IGAY  ++  +           L
Sbjct: 12  LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGTSAGYPLPL 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS +++G  G  +   + +       +  LI +      L  +  I  G    
Sbjct: 72  VLGAALVVSVLVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +             V        ++     L  ++ L++  + +  A 
Sbjct: 129 ----RDMSVPVLISGAFDIHLGGDFDVTVPYARLLIVCVTIALMIALTLFISHSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ +    L           F + +    + G     +  +++P    F   I   
Sbjct: 185 RACAEDMRMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L        G     +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPAEYKDVVAFG-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|329113960|ref|ZP_08242727.1| Urea ABC Transporter Permease Protein UrtC [Acetobacter pomorum
           DM001]
 gi|326696707|gb|EGE48381.1| Urea ABC Transporter Permease Protein UrtC [Acetobacter pomorum
           DM001]
          Length = 379

 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 51/359 (14%), Positives = 98/359 (27%), Gaps = 33/359 (9%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F   +        +  V+    L           ++ S+  + L Y + A  + +V G  
Sbjct: 12  FPGAIRMAAVTFAVTIVLAGASLLPEANPLHVSAFVVSLAGKYLAYAILALSVDLVWGFA 71

Query: 64  GLLSLNCVIAYAIGAYSYVILGS----------------RYGLSIWLLIPVSAMISGACG 107
           G+L+L     +A+G Y+  +                         W  +P     S    
Sbjct: 72  GILTLGHAAFFALGGYAMGMYLMREIGTRGVYGNPNLPDFMIFLSWKSLPWYWWGSDHFA 131

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
            +M L  +           L        + +         A +    +          L 
Sbjct: 132 WVMLLVLIVPGILAGVFGWLAFRSRVSGVYLSIITQALTYALMLAFFQNGLGFGGNNGLT 191

Query: 168 RFFRFPSSFVIYEIFMYYVLL---GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
            F     + +   +    +L+    +      +  WL           +RD +     L 
Sbjct: 192 DFKDILGADLHSPLTRAVLLVVTGAVLAGCLLLSRWLVSGRFGYLLVAVRDAENRTRFLG 251

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                AKL  +  S+   G+ GA +      I+P  F  + +I  +  V +GG  +LS  
Sbjct: 252 YRPEQAKLLIWVFSAMVAGIGGALYVTQVGIINPGEFAPANSIESVIWVAVGGRGTLSGS 311

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                ++     L       ++   L                            L+ LR
Sbjct: 312 VLGAVLVNCGKTLFTAWLPEFWLYGLGLLFLVTTLFL--------------PQGLMGLR 356


>gi|237798340|ref|ZP_04586801.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331021192|gb|EGI01249.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 359

 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
           + +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      + L  L      L           + +     
Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWALCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  S       ++   + +   S  I 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRAVLFLSTVALLVASLYIG 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WKLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 GEMSPTNSIEAAVWVALGGRGTLIGPLLGAGVVNGMKSW--------------FTMAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     +V L     ++ L
Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGL 352


>gi|156933946|ref|YP_001437862.1| hypothetical protein ESA_01772 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532200|gb|ABU77026.1| hypothetical protein ESA_01772 [Cronobacter sakazakii ATCC BAA-894]
          Length = 357

 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 53/333 (15%), Positives = 96/333 (28%), Gaps = 27/333 (8%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL- 84
           L           +  ++  +IL Y + A  L +V G  GLLSL   I +A+G Y+  +  
Sbjct: 36  LLPASHPLAVSTWTLTLMGKILCYAIVAVALDLVWGYAGLLSLGHGIFFALGGYAMGMYL 95

Query: 85  ------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
                        S    S                +++ L        +   A     + 
Sbjct: 96  MRQAAGDGLPAFMSFLSWSELPWYWWGTSNFLWALLLVVLVPGLLALVFGFFAFRSKIKG 155

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
               +I       G    +  +  +              F  +     I ++   L +  
Sbjct: 156 VYFSIITQALTFAGMLLFFRNETGFGGNNGFTGFTTLLGFSLTATGTRIALFIATLALLL 215

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
              ++ LWL R+        +RD +             KL  + +S+   G+AGA +   
Sbjct: 216 ACLAVGLWLARSKFGRVLTAVRDAESRLMYCGYDPRGFKLLVWTISAVMCGLAGALYVPQ 275

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              I+P     + +I     V LGG  +L        ++ G   L              F
Sbjct: 276 VGIINPGEMSPTNSIEAAIWVALGGRGTLVGPVFGALLVNGAKSL--------------F 321

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      + +   L+ L     +  L   
Sbjct: 322 TVVMPEYWQLFLGLIFILITLFLPRGVAGLLRR 354


>gi|119718342|ref|YP_925307.1| inner-membrane translocator [Nocardioides sp. JS614]
 gi|119539003|gb|ABL83620.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Nocardioides sp. JS614]
          Length = 352

 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 52/308 (16%), Positives = 107/308 (34%), Gaps = 18/308 (5%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V    + + + A           I I ++ + A  ++I  G  G+LS+      AIGAY
Sbjct: 17  LVLTAAVIVIMIAIGQDPAQVDSAITIAVFSLLALSVAISYGQAGVLSVAQAAFAAIGAY 76

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  IL +R+ L   + +  + ++       +     +     LA+ATL+  EI   +L +
Sbjct: 77  ATAILTTRWELHPLIGLVGAVLVPAVIAYPLSRLVGRLSHLALAVATLVFGEIVVILLRE 136

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
               T G  GI     L +                   +           +  L   +  
Sbjct: 137 GGDFTGGYIGISGIPPLPW------------------ALDLKNYAIFAWVLVILVVGLYA 178

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  ++     +TIR +     +    +       F++S+A  G+AG  +A     ++P+
Sbjct: 179 NLVSSSHGRGLQTIRWDTLRARADGVDVPARVAGVFSLSAAIAGLAGWLYAHYLTFLAPE 238

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
               + +I  I + ++GG   +        IL+ V                    +  + 
Sbjct: 239 SLPSAFSITAILMAVVGGTRYVLGPIVGATILLYVNNTLPSEEAQGLLYGAALVVALLVA 298

Query: 320 HTTLMVIA 327
              ++ + 
Sbjct: 299 PQGVLGLL 306


>gi|312135193|ref|YP_004002531.1| inner-membrane translocator [Caldicellulosiruptor owensensis OL]
 gi|311775244|gb|ADQ04731.1| inner-membrane translocator [Caldicellulosiruptor owensensis OL]
          Length = 312

 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 72/338 (21%), Positives = 134/338 (39%), Gaps = 42/338 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K   +     +V  L++ L +       YI      I++ ++ A  L+++ G  G  S
Sbjct: 1   MKKRFLVYSAFIIVLYLIITLLMKIGIIDDYIKLNLFLIMLNIILAVSLNLINGITGQFS 60

Query: 68  LNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           L      AIGAY+   +      +  +L + +  +++  CG+I+GLP L+ RGDYLAIAT
Sbjct: 61  LGHAGFMAIGAYTTAVLATLEKPVPFYLTVLIGGILAMICGLIIGLPVLRLRGDYLAIAT 120

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + I+     +  G +GI    +                               
Sbjct: 121 LGFGEIIRVIIQNIDYL-GGASGISDIPQGIDWTGYF----------------------- 156

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
                 LS  +IL +  ++   A   IR+++ A  ++       K+ AF + + F G+AG
Sbjct: 157 --VFTVLSVVVILNIINSSFGRAMIAIREDEIAAEAMGINTTLYKVLAFMIGAFFAGVAG 214

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           + ++ S   I PDMF F ++I ++ IV+               +          ++    
Sbjct: 215 SIYSGSFGFIQPDMFNFFKSIDILVIVV---------------LGGLGSISGSIISAIVL 259

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             +      +      L  + L +++L R   L+  + 
Sbjct: 260 TIISALLQDYPAVRMVLYSLILIIIMLFRPQGLMGTKE 297


>gi|148258222|ref|YP_001242807.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. BTAi1]
 gi|146410395|gb|ABQ38901.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 387

 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 106/360 (29%), Gaps = 38/360 (10%)

Query: 8   LNKYDKILCLLAVVYPLL------LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           L++   I  L+     +L      L     A +   Y+ ++  + + Y + A  + ++ G
Sbjct: 10  LDRAATIFVLIVAACGVLIPLSNLLLPAGSALQVPTYLVALWGKYVCYAILALSIDLIWG 69

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G+LSL     +A+G Y+  +   R   +  +                 LP      D 
Sbjct: 70  YCGILSLGHGAFFALGGYAMGMYLMRQIGTRGVYGNPILPDFMVFLNYSKLPWYWHGFDM 129

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162
              A L++  +   +   +  +                          +  D  +     
Sbjct: 130 FWFAALMVLFVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRNDFGFGGNNG 189

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +        F          ++ +      L+  I   +  + +      IRD +     
Sbjct: 190 LTDFKDILGFNVQAEGTRAALFALSCLALILAFLICRAVVSSKLGKVLIAIRDAESRTRF 249

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   +   KL  F +S+   G+AGA +      I+P  F    +I  +  V +GG  +L 
Sbjct: 250 LGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPSEFAPGNSIEAVIWVAVGGRGTLV 309

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             A    ++                               ++     LV L+    +L  
Sbjct: 310 GAALGAVVVNYAKTFFTS-------------GVLAPYWLFMLGALFVLVTLLLPKGILGT 356


>gi|300311771|ref|YP_003775863.1| branched-chain amino acid ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300074556|gb|ADJ63955.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 628

 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 116/269 (43%), Gaps = 18/269 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+  + ++IL+ V+FA  L  ++G  G++S      + +GAY+  ++  R    + L +
Sbjct: 345 PYLPVLMVEILVAVLFAASLHFLMGPGGMVSFGHAAYFGLGAYAAALVTLRLQWPMPLAM 404

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A  +    ++ G   ++  G YLA+ TL  ++I    + +W  +T G  G+      
Sbjct: 405 LAGAGTAMLAALLFGWFCVRLSGVYLAMLTLAFAQIVWAAIYQWDDLTGGSNGLV----- 459

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                            ++ +   +  YY+ L    L   ++  +       A R  RD 
Sbjct: 460 -------------GLRTAAALASPLAYYYLALLCSALGVYLLRRVIHAPFGLALRAARDA 506

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                +L   +   +   FA++  F G+AG  FA S+  ISP++   + ++  + +V+LG
Sbjct: 507 SGRAQALGMDVRALQWGGFALAGLFCGLAGVLFAFSKGSISPEVAGVNRSVDGLVMVLLG 566

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G+ SL+      ++   + +L      Y+
Sbjct: 567 GVQSLAGPLLGASVFTWLQDLVARETDYW 595



 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 97/306 (31%), Gaps = 18/306 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95
           + +         M A GLS++ G   +++      Y +G   AYS V          W  
Sbjct: 10  LLNGLADASAMFMVAAGLSLIFGVTRIVNFAHGSFYMLGLYLAYSLVDRLGATPWGYWAA 69

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + ++A+   A G ++ L  L+       +  L+ +     ++        G   ++    
Sbjct: 70  LLLAALPVAALGALVELTILRRIYRAPELFQLLATFALVLVIKDAALWYWGPEDLFGPRA 129

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
               G                     +   ++     + A + L L RT      R    
Sbjct: 130 PGLAGA----------VQVLGRRLPQYDLLLMAIGPLVFALLWLLLNRTRWGALIRAATQ 179

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++   +L     +     FA+     G+ GA                        +V++
Sbjct: 180 DREMLGALGVNQAWLFTGVFALGCFLAGLGGALQGPRLPA--NLALDLDTIGTAFVVVVV 237

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S+     A  ++  V  LC  +      S    + S +        + + +++++R
Sbjct: 238 GGMGSIGGAFAAAVLIAEVKALCIALGT---VSCFGIELSLSRLTLVAEFLVMAVILVVR 294

Query: 336 SHSLLR 341
              LL 
Sbjct: 295 PWGLLG 300


>gi|300715223|ref|YP_003740026.1| ABC transporter permease [Erwinia billingiae Eb661]
 gi|299061059|emb|CAX58166.1| ABC transporter, permease protein (UrtC-related) [Erwinia
           billingiae Eb661]
          Length = 358

 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 53/327 (16%), Positives = 95/327 (29%), Gaps = 27/327 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
                 Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 42  PLALSTYTLTLIGKILCYAIVAVALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQASG 101

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS---EIFQNILI 138
                      W  +P     +      + L  L      L           +     ++
Sbjct: 102 DGLPAFMSFLSWNELPWFWTGTQHFAWTLCLIVLVPGILALIFGFFAFRSKIKGVYFSIM 161

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                  G    +  +  +              F  +     I ++   + +   S  I 
Sbjct: 162 TQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFQVTATSTRIGLFVATVLLLVASLGIG 221

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 222 FALARSKFGRVLTAVRDAENRLMFCGYDPKGFKLFVWTLSAVLCGLAGALYVPQVGIINP 281

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        I+ G                  F  +F  
Sbjct: 282 SEMSPTNSIEAAIWVALGGRGTLIGPLLGAGIVNGAKSW--------------FTVAFPE 327

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345
                + +   LV L     ++ L   
Sbjct: 328 YWLFFLGLMFILVTLFLPRGVIGLIRR 354


>gi|239815404|ref|YP_002944314.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239801981|gb|ACS19048.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 355

 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 58/319 (18%), Positives = 118/319 (36%), Gaps = 11/319 (3%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                     S+  ++L++V+      +++G  G++S    + + IGAY   I  SR G 
Sbjct: 32  PFIFPGVKALSVAAKVLVFVVLVASFDLLLGYTGIVSFAHTMFFGIGAYGIAISASRLGP 91

Query: 91  SI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
           +     L +  S  +S      +GL SL+ R  + A+ TL ++  FQ +  +    T G+
Sbjct: 92  NWGAVLLGLAASLAVSLVLSFAIGLFSLRVRAIFFAMITLAVASAFQTLASQLSDFTGGE 151

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
            G+          +   S   F           +  YY+L     +    +L +  +   
Sbjct: 152 DGLTFKLPELISPSFEFSEDPFLGVSLDG---RLLCYYLLFVAAVVLVLALLRIVNSPFG 208

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-ISPDMFKFSEN 266
              + IR+N+    ++   ++  + +A  +S+ F  +AGA  A             F   
Sbjct: 209 RVLQAIRENEFRAEAIGYRVVVYRTTAAVLSALFATLAGAMLAIWLRYNGPDTSLSFEIM 268

Query: 267 IIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           I V+ IV++GGM ++   A    + +     + +L    +                R   
Sbjct: 269 IDVLLIVVIGGMGTIYGAAIGAVLFVVAQSYLQDLLRVGSEAASGLPWLAALLSPDRWLL 328

Query: 323 LMVIALFLVILMRSHSLLR 341
            + +   L +      ++ 
Sbjct: 329 WLGVLFVLSVYYFPTGIVG 347


>gi|91776126|ref|YP_545882.1| inner-membrane translocator [Methylobacillus flagellatus KT]
 gi|91710113|gb|ABE50041.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Methylobacillus flagellatus KT]
          Length = 389

 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 49/348 (14%), Positives = 100/348 (28%), Gaps = 36/348 (10%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + +       L +     + +   +  + L Y   A  L ++ G+ G+LSL   I + 
Sbjct: 14  GAIGLGILAAFILVVLPLGLEPFRLGLIGKYLTYAFVAVSLVLLWGNGGILSLGQGIFFG 73

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG-----LPSLKFRGDYLAIATLIMS 130
           +G Y+  +               S                      F+   L I  +++ 
Sbjct: 74  LGGYAMAMFLKLEASDPESTAIQSTPGIPDFMDWNQLTALPWFWEPFKSFPLTILAILIV 133

Query: 131 EIFQNILIKWKPITNGKAGIYVA-----------------DRLYFLGTTVRSLIRFFRFP 173
             F   LI +        G+Y A                          +  L     + 
Sbjct: 134 PTFFAFLIGYAMFKRRVGGVYFAIITQAIALILSILIIGQQGYTGGVNGITDLKTLMGWD 193

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
                 +  +YYV  G+      +  ++  +        +RD ++        +   K+ 
Sbjct: 194 IRTDSAKYVLYYVNAGLLIACILLSRYVLSSKFGMLLLAMRDKEERVRFSGYDVSNFKIF 253

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            F +S+    + GA F      +SP       +I ++    +GG  SL      T ++  
Sbjct: 254 IFCLSALISAIGGAMFTLQVGFMSPTFIGIVPSIEMVIFAAVGGRMSLIGAVYGTLLVNF 313

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              +              F  ++      LM      V++   + L  
Sbjct: 314 GKTM--------------FSETYPELWLFLMGGLFIAVVMFFPNGLAG 347


>gi|254502617|ref|ZP_05114768.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222438688|gb|EEE45367.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 353

 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 115/323 (35%), Gaps = 11/323 (3%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---L 84
            F               +I I+++      +++G  G++S    + + IGAY   +    
Sbjct: 28  AFAPFLFPGTRSLETAAKICIFIVLVASYDLLLGYAGIVSFAHTMFFGIGAYGTALALST 87

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                 S+       A+++    + +GL SL+ +  + A+ TL ++  F  ++ +   +T
Sbjct: 88  TGPTYGSMIWGTAAGAIVAAVFALAIGLFSLRVKAIFFAMVTLAIASAFAVLVSQLSWLT 147

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G+ G+  +    F         + F    +    ++ +YY++     +    +L +  +
Sbjct: 148 GGEDGLNYSIPREFKPAFKLVDEKIFDVRING---KLLLYYLVFFASLILFLTMLRIVNS 204

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DMFKF 263
                 + +RDN     ++   +++ + +A  +S+    +AG+  A       P      
Sbjct: 205 PFGRTLKAVRDNAFRAEAIGYRVVWYRTTATVLSAVMAALAGSLLAIWLRYTGPATTLSM 264

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM----NFYYFNSLLKFDCSFNMR 319
              I ++ +V++GGM +L        I I        +            L        R
Sbjct: 265 EIMIDILLMVVIGGMGTLYGAVIGATIFILAQTYLQNLMGVAAEATSAIPLVSTLVAPER 324

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
               + +   L +      ++  
Sbjct: 325 WLLWLGVLFILSVYFFPSGIVGR 347


>gi|6690693|gb|AAF24261.1| Orf405 [Rhodobacter sphaeroides]
          Length = 405

 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 29/300 (9%), Positives = 73/300 (24%), Gaps = 13/300 (4%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           IY + A GL+I  G + ++++       +GAY+  ++          ++    +      
Sbjct: 117 IYFLAAIGLAITFGVMRVINMAHGEFIMMGAYTGYVVQQWISDYTISILVALPLAFDRHL 176

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
            +      +    +L    L  +       +        K                    
Sbjct: 177 RVPASTMERLVIRHLYRRPLAKNAAGHVRHLHRAAAARPKNIFRHPGPASSTAPAWLDER 236

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                    +               +    +        +              S+    
Sbjct: 237 AEASNDVVSIQLHHASRSSSSQRSSIGVFPLHHDAHPPRARGAGGNSRTPTMAASMGINP 296

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
               +  F + S   G+AG                +         V++GG+ ++      
Sbjct: 297 DRINMLTFGLGSGIAGIAGVAIGLFAKVTFELGQDYIVQS--FMTVVVGGVGNIWGTLAG 354

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
            A++ GV +    +N     +   +   F +                R   ++ L+  + 
Sbjct: 355 AAMIGGVQKGIEWLNPLNTLAAQTYMILFIIIFIQF-----------RPRGIVALKGRAA 403


>gi|257092808|ref|YP_003166449.1| urea ABC transporter permease UrtC [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045332|gb|ACV34520.1| urea ABC transporter, permease protein UrtC [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 388

 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 45/348 (12%), Positives = 98/348 (28%), Gaps = 32/348 (9%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
               L+AV    L            +  ++  +IL Y + A  + ++ G  G+LSL   +
Sbjct: 30  AAFALVAVPVMHLALPPDHPLHLSTWFITLVGKILCYAIVAVAMDLIWGYGGILSLGHGL 89

Query: 73  AYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
            +A+G Y++ +                        W  +P     S +   +  L  +  
Sbjct: 90  FFALGGYAFGMYLMRQIGRDGSYQSDLPDFMVFLDWKELPWFWAGSDSFLWVALLVLVVP 149

Query: 118 RGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
                                 +I            +  +  +          R   +  
Sbjct: 150 AVIAFVFGYFAFRSRIKGVYFSIITQALTYAAMLLFFRNETGFGGNNGFTDFKRILGYSI 209

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
           +     + ++ +       +  +  +L  +        IRD +     +    ++ KL  
Sbjct: 210 TAPETRVVLFALSALALIGTLLLARYLVTSKFGRVLTAIRDAESRVMFIGYNPLWYKLFV 269

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           + +S+     AGA +      I+P     + +I +   V +GG  +L        I+   
Sbjct: 270 WTLSAMLCAFAGALYVPQVGIINPSEMSVANSIEIAIWVAVGGRGTLIGPVIGAFIVNLA 329

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                            F  SF       +     +  L     ++ L
Sbjct: 330 KSW--------------FTVSFPEYWLFFLGTLFIVATLYLPQGVVGL 363


>gi|296129816|ref|YP_003637066.1| inner-membrane translocator [Cellulomonas flavigena DSM 20109]
 gi|296021631|gb|ADG74867.1| inner-membrane translocator [Cellulomonas flavigena DSM 20109]
          Length = 462

 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/309 (13%), Positives = 95/309 (30%), Gaps = 28/309 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I  ++  + + G +++ G+ GL +        +G  +  +   R+GL +WL I V
Sbjct: 178 VLAGTIFGVLLALASLGANLIYGTTGLSNFAHGELVTLGGMTAFLAVQRWGLPLWLAIVV 237

Query: 99  SAMISGACGMI--MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           S +  G  G +    + +   R        +I++      ++       G     +   +
Sbjct: 238 STVAGGLVGWLLNQLIFAPLRRRGVGVTQQMIVTIGLSLAMLSGFLFAFGARPAPIVSGI 297

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                         R     V         +     +  ++ + L RT +  A R + DN
Sbjct: 298 S------------QRMQIGPVQISGQSLVSVGIAVVVLTAVAVVLSRTRLGRATRAVSDN 345

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                +    +       + VS     + G   A   +  +   F  +  +++ + + LG
Sbjct: 346 PALAAATGIKVESVISRVWVVSGGLASLGGVLLALYLNT-TRFNFGSTLLLLMFAAITLG 404

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S         ++  VVEL   +                +                R 
Sbjct: 405 GLGSPLGAVLGALVIGLVVELSTLVLPSDMRYASALVILILVLLL-------------RP 451

Query: 337 HSLLRLRTP 345
             +L     
Sbjct: 452 QGILGRAER 460


>gi|33595272|ref|NP_882915.1| putative branched-chain amino acid transport system permease
           [Bordetella parapertussis 12822]
 gi|33599563|ref|NP_887123.1| putative branched-chain amino acid transport system permease
           [Bordetella bronchiseptica RB50]
 gi|33565349|emb|CAE36152.1| putative branched-chain amino acid transport system permease
           [Bordetella parapertussis]
 gi|33567159|emb|CAE31073.1| putative branched-chain amino acid transport system permease
           [Bordetella bronchiseptica RB50]
          Length = 345

 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 51/325 (15%), Positives = 122/325 (37%), Gaps = 24/325 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +   +++   + A     Y   +    L+    A   +++ G  G +SL   + +AIG+Y
Sbjct: 19  IAALVVVAAAVAAPWMNPYYTRVMTMGLMCGYLAASWNLIGGYAGQMSLGHALFFAIGSY 78

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNIL 137
           S  +L     + +    P++ ++S     I+     +   RG Y A+ TL+++EI + ++
Sbjct: 79  SVALLARMPDVPLVAAFPLAILVSVGLAWIIATICFRYALRGIYFAVGTLLLAEIARILV 138

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I    +                 +    +       +     ++  +Y+ LG+    A  
Sbjct: 139 INSDVL---------------GRSQGLQIPGMQGALNFSFGSDLPFFYIFLGISIALALG 183

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L L R  +      +R+ ++   +L   +   K  AF +S+A   + G  +A     + 
Sbjct: 184 SLALERCKLGYDLVALREQEEGAQALGVDVAAIKRLAFVLSAALTCVGGVIYAGLVRYVE 243

Query: 258 P-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P      S  + ++   +LGG  +         +++ V E    +   +  +      S 
Sbjct: 244 PGYDLSLSITLFMVMGAVLGGRGTALGPFLGGVVMVIVQETLITVGSAFGTT------SV 297

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
           +     +  +   +++L+    ++ 
Sbjct: 298 SALAQMIYGLFFVVILLVFPRGIVG 322


>gi|302188758|ref|ZP_07265431.1| inner-membrane translocator [Pseudomonas syringae pv. syringae 642]
          Length = 359

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
           + +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      M L  L      L           + +     
Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  S       ++   + +   S  I 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISAQGTRAALFLATVALLVASLYIG 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTMAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     +V L     ++ +
Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGM 352


>gi|270284573|ref|ZP_05966356.2| putative Branched-chain amino acid transport system, permease
           component [Bifidobacterium gallicum DSM 20093]
 gi|270276463|gb|EFA22317.1| putative Branched-chain amino acid transport system, permease
           component [Bifidobacterium gallicum DSM 20093]
          Length = 448

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/301 (10%), Positives = 85/301 (28%), Gaps = 28/301 (9%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           L+  + + G++++ G+ GL S +      +G     +      + IWL    + +I    
Sbjct: 172 LMLALMSVGMNLIYGTTGLSSFSHGEQVTLGGLMAYLGAQVMHMPIWLAAVFAIVIGALT 231

Query: 107 GMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
           G I  +       +     +  +I++      L        G                  
Sbjct: 232 GFIEDVLIWGPLRKKRIGPLQQMIVTIGLSMALQYLFQCFFGGD------------IKGI 279

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           +           +               + A +  +L RT +  A R + DN     +  
Sbjct: 280 TKSIPEAIQIGPITTNAPSLLAAAIAIIVIAGVTFFLYRTRLGRATRAVSDNSALAAASG 339

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
             +       + ++     ++G       + IS +    +  +++ + V LGG+ + +  
Sbjct: 340 INVNRVVRVVWTLACGLAALSGVLMGIYLNGISWNT-GATLLMLMFAAVTLGGLGTANGA 398

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
              + ++  V ++                    +                R   +   + 
Sbjct: 399 LVGSLVIGIVADMSSLFIPSDMRYASALAILIIVLLI-------------RPQGIFGKQQ 445

Query: 345 P 345
            
Sbjct: 446 R 446


>gi|94986131|ref|YP_605495.1| inner-membrane translocator [Deinococcus geothermalis DSM 11300]
 gi|94556412|gb|ABF46326.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Deinococcus geothermalis DSM 11300]
          Length = 318

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 54/286 (18%), Positives = 109/286 (38%), Gaps = 15/286 (5%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
              L+    +     +     + + IL + +FA    ++ G  GLLS      +   AY 
Sbjct: 19  AAWLIGLGIVLLILPRLIYPVLALDILAWGLFAVAFDLLFGFSGLLSFGHAAFWGTSAYV 78

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
              L         + +      +    + +G  S++  G Y ++ TL  +++   + ++W
Sbjct: 79  TAFLLGHGQSVP-VALLGGTGSALLIALPIGFLSVRSIGIYFSMITLAFAQMLSFVALQW 137

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G+ G+    R  FLG                       YY  L +  L   +   
Sbjct: 138 TDVTGGENGLQGLARPGFLGLDFSDATT--------------RYYFCLVLFALGFYVAYR 183

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             R+    A + +RDN++   S+       K +AF +S+   G+AG+ F      +S D+
Sbjct: 184 TVRSPFGQALQAVRDNEQRAQSIGYNPQRFKFTAFLISATLAGLAGSMFTFGHGVVSLDV 243

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             +  +  V+ + +LGG T+L        +++ + ++    N    
Sbjct: 244 LNWRTSGEVVMMTLLGGTTTLFGPVIGAGLVLLLRDVLTTANLPVG 289


>gi|300710023|ref|YP_003735837.1| inner-membrane translocator [Halalkalicoccus jeotgali B3]
 gi|299123706|gb|ADJ14045.1| inner-membrane translocator [Halalkalicoccus jeotgali B3]
          Length = 349

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 103/303 (33%), Gaps = 3/303 (0%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A     +  L      +  Y  +     L+Y +    L ++ G  G+LS   V  + IG 
Sbjct: 21  AGFGLAVFALLGYPLVASTYAVANAALFLLYAILGLSLCVIWGYCGILSFGQVAFFGIGG 80

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y++ I+G      I   +    +++G     +    L +   Y  +  + ++ +   + +
Sbjct: 81  YTFGIVGINLTGGIGPTLG---LLAGIGVATLFAFVLGYFMFYGGVRDVYVTIMTLVVAL 137

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                    AG   A     LG                 + +   YYV+L     +   +
Sbjct: 138 VIHTFMGQTAGSEWAIGEAALGGFDGMTNIPNLAVGGVELIDTAFYYVVLLALLGTYLGL 197

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L  +    A   +R++++    L       KL  F +     G++G  +A+  + ++P
Sbjct: 198 RALVNSDFGRAMVAVREDEERTELLGYDTKRIKLLVFTLGGTLAGLSGVLYASWGNYMNP 257

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            +F  +   + +  V +GG  SL     AT  +    +        Y   ++       +
Sbjct: 258 AVFGITFAALPVVWVSVGGRDSLLGAIGATYAVEWFSQQLSITGNEYALVVVGGLLLVTI 317

Query: 319 RHT 321
              
Sbjct: 318 LWL 320


>gi|190893260|ref|YP_001979802.1| branched-chain amino acid ABC transporter permease [Rhizobium etli
           CIAT 652]
 gi|190698539|gb|ACE92624.1| probable branched-chain amino acid ABC transporter, permease
           protein [Rhizobium etli CIAT 652]
          Length = 333

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 57/335 (17%), Positives = 118/335 (35%), Gaps = 28/335 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           LA +  ++    +G       + ++  +++   +    L +V G  G+ +L     +  G
Sbjct: 23  LAGIMVIIAVAAVGYFAFPDNL-ALLTRMITIALLVLSLDLVTGYCGVATLGHAALFGSG 81

Query: 78  AYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           AY+  IL + Y      L++        A G++ G   L+  G    + ++ +  +F   
Sbjct: 82  AYAAGILSAHYGVNDPLLMLLAGIAGGAASGLLSGAIILRAHGLPQLVLSIALIHLFHEF 141

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
             K    T G  G+         G               F +Y    ++    +  +  +
Sbjct: 142 ANKASSWTGGSDGLSGIAPDPIFGL------------FEFDLYGQTAFFFGTALLLVVFA 189

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++  L R+      R IR +     ++  +   A +  + +S A  G+ GA  A S   +
Sbjct: 190 LLRLLVRSPFGMLCRGIRQDPLRIRAMGGSPKAALIRMYVISGAVAGVGGALNAISTQVV 249

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
             D   F+++   + +++LGG  SL      T I +   +     N +++          
Sbjct: 250 GLDSLSFTQSAEALVMLVLGGAGSLFGALSGTIIFMLFEDYVSAANPFHW---------- 299

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                T++   L  V+L     L           R
Sbjct: 300 ----LTMVGALLIAVVLFAPKGLYGTAAALIVRRR 330


>gi|27375994|ref|NP_767523.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27349133|dbj|BAC46148.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 373

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 108/322 (33%), Gaps = 13/322 (4%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSR 87
                     ++  +I ++        +++G  G +S    + Y IG+Y+  I       
Sbjct: 41  PFLFPGAKALNVAAKICVFAALVASYDLLLGYTGSVSFAHTMFYGIGSYAIAIALYGMGP 100

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
              ++   I V   ++    + +GL SL+    + A+ TL ++  FQ +  +   +T G+
Sbjct: 101 NWAAVATGIVVGLPLAALLALAIGLFSLRVAAIFFAMITLAVASAFQVLASQLSWLTGGE 160

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
            G            TV      F F  +     I  YY++L +  L    +L +  +   
Sbjct: 161 DGRSFQLPELLRPGTVLISRNLFGFEVNG---RILTYYLVLAISALMILALLRVVNSPFG 217

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI-SPDMFKFSEN 266
              + IR+N+    +L    +F    A  +++     AG   A             FS  
Sbjct: 218 RVLQAIRENRFRAEALGFRTVFHLTYANCLAALVAASAGILNALWLRYAGPDTSLSFSIM 277

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGM------NFYYFNSLLKFDCSFNMRH 320
           + ++ +V++GGM ++        I I        +              L        R 
Sbjct: 278 LDILLMVVIGGMGTIYGAIIGATIFILAQNYLQSLMGVASKAASEAGLPLLPGLLHPDRW 337

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
              + +     +      ++  
Sbjct: 338 LLWLGLLFIASVYFFPTGVVGR 359


>gi|312875931|ref|ZP_07735921.1| inner-membrane translocator [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797412|gb|EFR13751.1| inner-membrane translocator [Caldicellulosiruptor lactoaceticus 6A]
          Length = 312

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 73/338 (21%), Positives = 136/338 (40%), Gaps = 42/338 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K   +  +  +V  L++ L +       YI      I++ ++ A  L+++ G  GL S
Sbjct: 1   MKKRLLVYSVFVIVLYLIITLLMKMGIIDDYIKLNLFLIMLNIILAVSLNLINGITGLFS 60

Query: 68  LNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           L      AIGAY+   +      +  +L + +  + +  CG+I+GLP L+ RGDYLAIAT
Sbjct: 61  LGHAGFMAIGAYTTAVLTTLEKPVPFYLTVLIGGLFAMICGLIIGLPVLRLRGDYLAIAT 120

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + I+     +  G +GI    +                               
Sbjct: 121 LGFGEIIRVIIQNIDYL-GGASGISDIPQGIDWTGYF----------------------- 156

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
              +  LS  +IL +  ++   A   IR+++ A  ++       K+ AF + + F G+AG
Sbjct: 157 --VITVLSVVVILNIINSSFGRAMIAIREDEIAAEAMGINTTLYKVLAFMIGAFFAGVAG 214

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           + ++ S   I PDMF F ++I ++ IV+               +          ++    
Sbjct: 215 SVYSGSFGFIQPDMFNFFKSIDILVIVV---------------LGGLGSISGSIISAIVL 259

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             +      +      L  + L +++L R   L+  + 
Sbjct: 260 TIISALLQDYPAVRMVLYALILIIIMLFRPQGLMGTKE 297


>gi|157369666|ref|YP_001477655.1| inner-membrane translocator [Serratia proteamaculans 568]
 gi|157321430|gb|ABV40527.1| inner-membrane translocator [Serratia proteamaculans 568]
          Length = 358

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 53/344 (15%), Positives = 102/344 (29%), Gaps = 27/344 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L ++  L L           Y  ++  +IL Y + A  L +V G  GLLSL   + +
Sbjct: 25  LLVLLIMPFLALLPADHPLAISTYTLTLVGKILCYAVVAVALDLVWGYAGLLSLGHGLFF 84

Query: 75  AIGAYSYVIL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           A+G Y+  +               S    +                 ++ L        +
Sbjct: 85  ALGGYAMGMYLMRQAAGDGLPAFMSFLSWNELPWFWSGTQYFAWALCLIVLVPGVLAFVF 144

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
              A     +     ++       G    +  +  +              FP +     +
Sbjct: 145 GYFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPITATGTRV 204

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            ++   + +   S +I   L R+        +RD +             KL  + +S+  
Sbjct: 205 ALFVTTVLLLAASLAIGFALARSKFGRVLTAVRDAENRLTFCGYDPKGFKLFVWTLSAVL 264

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AGA +      I+P     + +I     V LGG  +L        I+ G        
Sbjct: 265 CGLAGALYVPQVGIINPGEMSPTNSIEAAIWVALGGRGTLVGPLLGAGIVNGAKSW---- 320

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                     F  +        + +   +V L     ++ L   
Sbjct: 321 ----------FTMAIPEYWQFFLGLMFIVVTLFLPKGVIGLLRR 354


>gi|299541878|ref|ZP_07052201.1| high-affinity branched-chain amino acid transport system permease
           protein [Lysinibacillus fusiformis ZC1]
 gi|298725616|gb|EFI66257.1| high-affinity branched-chain amino acid transport system permease
           protein [Lysinibacillus fusiformis ZC1]
          Length = 291

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 100/303 (33%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      + IG++      +++ L  +  + +
Sbjct: 7   LVNGISLGSIYALIALGYTMVYGIIKLINFAHGDVFMIGSFIGFYAIAKWELGFFPALLL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G+++   + K   +   IA LI +     ++        G            
Sbjct: 67  AMLVCAIFGVLIERIAYKRLRNATRIAALITAIGVSLLIEYTTIFFRGAQPAAYP----- 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  + +        V        +L     L   +   + +T I  A R +  +  
Sbjct: 122 ------EVFKNKSLDVFGVQISSTSILILSVAVVLMILLQFIVHKTKIGKAMRAVSHDAD 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +     + FA+ SA  G AG  F     +I P M      +      +LGG+
Sbjct: 176 AARLMGINVDNTISATFAIGSALAGAAGVIFGVYYTKIDPLM-GVIPGVKAFIAAVLGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        +L  V  L   + F  +     F             + L L+++ R   
Sbjct: 235 GIIPGAMVGGMLLGVVESLVSALGFSLWRDAAAF-------------VILILILIFRPSG 281

Query: 339 LLR 341
           +  
Sbjct: 282 IFG 284


>gi|121606098|ref|YP_983427.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120595067|gb|ABM38506.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 309

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 101/305 (33%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G + L++        +GA +   +      ++      
Sbjct: 8   IINGLVLGSMYALIALGYTMVYGIINLINFAHGEVLMVGALTSWTIIGWMQEAMPGAPGW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++       +   +L F  + +A   L  S     ++         +    +  +  +
Sbjct: 68  LVLLISLLIAFVVCAALNFTIEKVAYRPLRNSPKLAPLITAIGMSLLLQTLAMIIWKPNY 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +  +L+    F     +  +   ++L       + ++  +  T +  A R   +N +
Sbjct: 128 --KSYPTLLPAEPFQIGGAVITVTQLFILGTTAVSLSVLMWLVHYTKLGRAMRATAENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + F + +    +AG  +A++   +   M  F   +   +  + GG+
Sbjct: 186 VAALMGVRPDTVISATFIIGAILAALAGVMYASNYGTVQHTM-GFLPGLKAFTAAVFGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L  +  +  G        +L      +        I L  V+ +R   
Sbjct: 245 GNLGGAVLGGILLGLIEAIGAGYIGPLTGGVLG-----SQYSDIFAFIVLIFVLTLRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|83720104|ref|YP_442048.1| branched-chain amino acid ABC transporter permease [Burkholderia
           thailandensis E264]
 gi|167580887|ref|ZP_02373761.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis TXDOH]
 gi|257138230|ref|ZP_05586492.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis E264]
 gi|83653929|gb|ABC37992.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis E264]
          Length = 401

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 48/347 (13%), Positives = 97/347 (27%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 58  IAVGIGVPLAALVAPESSAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 117

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 118 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLAPA 177

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            Y  +  +          R   F  +
Sbjct: 178 ALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 237

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  ++ +       S      +  + +      IRD +     L  + +  KL  +
Sbjct: 238 SPGTRCALFLITFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 297

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+   G+AGA +      I+P     + +I +   V +GG  +L         + G  
Sbjct: 298 VVSAVLCGIAGALYVPQVGIINPSEMSPANSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 357

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +                  F       + +   LV L+    ++ L
Sbjct: 358 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 390


>gi|56698527|ref|YP_168903.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56680264|gb|AAV96930.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 350

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 48/342 (14%), Positives = 126/342 (36%), Gaps = 12/342 (3%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             ++  L +   L+                   +I ++++      +++G  G++S    
Sbjct: 12  RSLVLALILGLILVCLALAPFLFPGVRTVDTAARICVFIVLVASYDLLLGYGGIVSFAHT 71

Query: 72  IAYAIGAYSYVILGSRYGLSI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           + + IGAY   +  +  G       +    SA+++ A   ++GL SL+ R  + A+ TL 
Sbjct: 72  MFFGIGAYGVALALTHLGRGFDAILVGAGASALLAAALAFVIGLFSLRVRAIFFAMITLA 131

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           ++     ++ +   +T G+ G+                  F       +  ++  YYV+ 
Sbjct: 132 VASAVAVLVSQLSGLTGGEDGLTFKTPRALGPAFKFGDELF----GVKLNGKLLSYYVVF 187

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
               +   ++L +  +      + IR+N     ++   +++ +++A  +S+A   +AG+ 
Sbjct: 188 IGSLVLFLLMLRVVNSPFGRVLQAIRENDFRAEAIGYRVVYYRVAATCLSAAVAALAGSL 247

Query: 249 FAASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
           +A     + PD        I ++ +V++GGM ++        +L+        +     +
Sbjct: 248 YAIWLRYVGPDTTLSMEIMIDILLMVVIGGMGTMYGAVIGATLLVLAQNYLQNLMGVAGS 307

Query: 308 SLLKFDCSFNMR----HTTLMVIALFLVILMRSHSLLRLRTP 345
            +        +         + +   L +      ++     
Sbjct: 308 LVDGVPVLPQLLDADRWLLWLGVLFILSVYFFPTGVVGRLRR 349


>gi|146340683|ref|YP_001205731.1| ABC transporter [Bradyrhizobium sp. ORS278]
 gi|146193489|emb|CAL77505.1| conserved hypothetical protein; putative membrane protein; possible
           ABC transporter [Bradyrhizobium sp. ORS278]
          Length = 322

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 48/289 (16%), Positives = 106/289 (36%), Gaps = 17/289 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++A V    L   +  T    +     +Q L + + A   ++++G  GLLS    +    
Sbjct: 20  MIAFVIMAALLAIVPFTGLYPFFV---MQALCFALLACAFNLLIGYGGLLSFGHAMFLGT 76

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
             Y        +G    L I      +    ++ G  S++ +G Y ++ TL +S++   +
Sbjct: 77  AGYCSAHALKVWGFPPELGILTGIAGAFVLSIVTGYISIRRQGIYFSMITLALSQLLYFV 136

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            ++                       ++ + +   F    +     +YYV+L        
Sbjct: 137 YLQ--------------TPFTHGEDGIQGIPQGKLFGFIDLSKPFTLYYVVLVGFLAGFL 182

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +I     +      ++IR+N++   SL       KL AF +S    G AG+         
Sbjct: 183 LIFRTINSPFGEVLKSIRENEQRAISLGYKTDQYKLLAFILSGTIAGFAGSLKVFVAQNA 242

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           S     +S +  ++ + ++GG+ ++        ++I + +   G   + 
Sbjct: 243 SLTDVHWSMSGEIVLMTLVGGLGTVFGPVVGAFVIIAMQQYLAGFGQWV 291


>gi|226356147|ref|YP_002785887.1| branched-chain amino acid ABC transporter permease [Deinococcus
           deserti VCD115]
 gi|226318137|gb|ACO46133.1| putative branched-chain amino acid ABC transporter, permease
           component [Deinococcus deserti VCD115]
          Length = 334

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 133/351 (37%), Gaps = 38/351 (10%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+  S+ + +   +      +  ++L +            + GI  L++   A   +I+ 
Sbjct: 1   MTASSVSVARPRALTFGNVWLSAVILAVLFIYPFVFGKTMNFGISTLLFAGLAMSWNILG 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSR--------YGLSIWLLIPVSAMISGACGMIMGL 112
           G  G  SL       IGAY+  +L +           ++ W    +   ++ A   + G 
Sbjct: 61  GWAGQTSLGHAALLGIGAYTMTLLATPERVPALFGGPVAPWWGTLIGMALAVALAAVWGA 120

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
            + + RG Y  ++T+ ++ + + + I  +  T G  G+++ +   F G  +         
Sbjct: 121 LTFRLRGSYFTLSTIAVALVIRLVAINSEW-TGGSEGLFMPELPRFFGLDLFDRR----- 174

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
                      Y++      L+  +   +RR+ +  A + +R+++    +L       KL
Sbjct: 175 ---------VEYWLSFAFVVLTLLVTHLIRRSRLGYALQAVREDEDGARALGIDPTRMKL 225

Query: 233 SAFAVSSAFIGMAGAFFAASRD-RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
            AF +S+A   + GA +A          + +   ++ +  + I+GG TS+        +L
Sbjct: 226 IAFMISAALTALGGALYAIYLQAFEPHTLLELPISVQIALMAIIGGRTSIQGPLIGAVLL 285

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               E+   +              F+  +  +  + + LV L   + ++ L
Sbjct: 286 ATFGEVFRNV--------------FSSANLLIYGVLILLVTLYAPNGIMGL 322


>gi|17548236|ref|NP_521576.1| amino-acid transmembrane ABC transporter protein [Ralstonia
           solanacearum GMI1000]
 gi|17430482|emb|CAD17166.1| probable amino-acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 299

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 59/302 (19%), Positives = 118/302 (39%), Gaps = 41/302 (13%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             ++ + + I  + A  + + + S GLL++       IGAY+  +L     +   + +  
Sbjct: 11  YSNLVLTLGINALLALSIYLTL-SCGLLAMANAAFMGIGAYTSALLTMNAEMPFPVALLG 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +      +I+G P+L+  G YLA+ATL   E+ + +++  +  T G  G+    +L  
Sbjct: 70  GMLAPAVVAVIIGRPTLRLSGVYLAMATLGFGEVVRVLILNTESWTGGALGLNGIPQLTE 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                       +     L+  ++  LRR+ +  A+  I++++ 
Sbjct: 130 WWH-------------------------VALAVALTLFVLARLRRSKVGRAFEAIKEDET 164

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +   KL AF + +   G+AGA  A     I P  F F   + ++++ ILGG 
Sbjct: 165 AAGLMGINVAGTKLLAFVLGAMIAGLAGALNAHLTFFIGPAEFGFDRGVEILTMAILGGT 224

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L+     + IL  + EL      +                  +  + L L++L     
Sbjct: 225 NGLTGPVLGSVILSLLPELLRAFKDF---------------RLVVNGLILMLIVLFLPKG 269

Query: 339 LL 340
           + 
Sbjct: 270 IW 271


>gi|254431008|ref|ZP_05044711.1| urea ABC transporter, permease protein UrtC [Cyanobium sp. PCC
           7001]
 gi|197625461|gb|EDY38020.1| urea ABC transporter, permease protein UrtC [Cyanobium sp. PCC
           7001]
          Length = 375

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 103/353 (29%), Gaps = 42/353 (11%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           RL ++   L ++A    L   L         +  ++  + L   + A G+ ++ G  G+L
Sbjct: 3   RLRQWLPWLLIIAAGLILPAVL-------PPFRLNLLGRFLSLGIVALGIDLIWGFTGML 55

Query: 67  SLNCVIAYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGM 108
           SL   I +A+G Y+  +                   G +   + W              +
Sbjct: 56  SLGQGIFFALGGYAIGMYLQLKSLAPGQLPEFFGLYGVQELPAFWKPFGSPLFTFFCIWV 115

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
           +  L +              +                      + +    L        R
Sbjct: 116 LPALVAGVLGYLVFRNRIKGVYFSILTQASLLVFFNFFNGQQKLINGTNGLK---TDTAR 172

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
            F         + ++++V L +   S  +  WL R    +A   IRD++           
Sbjct: 173 IFGQLVGSDGMQRWLFWVTLLLVVASWLLCRWLTRGRFGDALIAIRDDEPRLRFTGYNPT 232

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
             K   FA++ A  G++GA +      ISP       +I ++  V +GG  +L       
Sbjct: 233 AYKTVVFAIAGALAGVSGALYTVQSGIISPQFMAVPFSIEMVIWVAVGGRGTLIGAVLGA 292

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            ++     L                         +      LV+      L+ 
Sbjct: 293 VLINYAKSLVSE--------------QLPETWLFIQGGLFLLVVTALPDGLVG 331


>gi|237653793|ref|YP_002890107.1| branched-chain amino acid ABC transporter permease [Thauera sp.
           MZ1T]
 gi|237625040|gb|ACR01730.1| inner-membrane translocator [Thauera sp. MZ1T]
          Length = 322

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 67/331 (20%), Positives = 129/331 (38%), Gaps = 26/331 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +L+    +L  L L       +   +  +IL+  +FA  L+++VG  GL+SL     + 
Sbjct: 5   VVLSFKLAVLAGLVLFPAIGSSFYVELVAKILVMSIFAMSLALLVGFTGLVSLGHAAYFG 64

Query: 76  IGAYSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           I AY+  ++   Y   ++W ++  S + +GA    +GL  L+ +G Y  + TL  +++  
Sbjct: 65  IAAYTVALIAPEYEAANLWFVLAASVLAAGAAAFFIGLFVLRTKGIYFIMVTLAFAQMAY 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I        +                        F +    +   + +YY +L      
Sbjct: 125 YIFHDTALGRSSDGIYLNVKP----------DASLFGWMPFNLDEPLHLYYFILAAMVAV 174

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             ++ ++ R+        I  N+    SL       KL+AF ++ A  G+AG  +A    
Sbjct: 175 FVLLAFVLRSPFGRVLAGIHSNEHRMKSLGYATQRYKLAAFTLAGALAGVAGFLYAVLFG 234

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++PD   + ++  V+ +VILGG+ SL+         IG+ E+      ++         
Sbjct: 235 FVTPDYLSWHQSGNVLLMVILGGLGSLAGAVAGAFAFIGLQEMFSDWTKHW--------- 285

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                   LM + +   +L     L  L   
Sbjct: 286 ------QLLMGLVIVAAVLFMPSGLAGLPRR 310


>gi|116053008|ref|YP_793326.1| putative branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115588229|gb|ABJ14244.1| putative branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 529

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 92/295 (31%), Gaps = 31/295 (10%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL----SIWLLIPVSAMISGACGMIMGLP 113
           I  G LG++++       +GAYS  ++   +       + L   ++  ++      +G+ 
Sbjct: 256 ITYGLLGVINMAHGEMLMLGAYSTYVVQLLFQRLAPEWLALYPLLALPVAFCVSAAIGMA 315

Query: 114 SLKFRGDYLAIAT---LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
             +    +L       L+ +     +LI+   +  G   + VA+            +   
Sbjct: 316 LERTVIRHLYGRPLETLLATWGISLVLIQLVRMLFGAQNVEVANPA---------WLSGG 366

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                 ++       ++    F+     L L RT +    R +  N+             
Sbjct: 367 IQVLPNLVLPWNRIVIIGFALFVLLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVPTGRV 426

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
            + AF + S   G+ G   A S+             I    +V+LGG+  L+    A   
Sbjct: 427 DMLAFGLGSGIAGLGGV--ALSQVGNVGPDLGQGYIIDSFLVVVLGGVGQLAGSVLAAFG 484

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           L    ++                         L++  + L I  R   L  L+  
Sbjct: 485 LGVANKILEPQIGAVLGK-------------ILILALIVLFIQKRPQGLFALKGR 526


>gi|56752210|ref|YP_172911.1| neutral amino acids ABC transporter permease [Synechococcus
           elongatus PCC 6301]
 gi|56687169|dbj|BAD80391.1| ABC-type Nat permease for neutral amino acids [Synechococcus
           elongatus PCC 6301]
          Length = 359

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 63/360 (17%), Positives = 120/360 (33%), Gaps = 51/360 (14%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           YI  +   I ++ +F  GL++  G  GLL+   V    IGAYS  +L  +    +WL   
Sbjct: 4   YIILLVCTIALFALFYVGLNLHWGYTGLLNFGHVAFLLIGAYSVSLLAQQGWP-LWLAAI 62

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
               ++   G++MG+ SL+   DYL I T+ ++E+ +  +     +T G  G+     + 
Sbjct: 63  AGVTLAALLGLVMGVASLRLSQDYLGIVTVGLAEVLRIFVQNETGLTQGSFGVQAYPIIL 122

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG---------------------------- 189
                              +    +                                   
Sbjct: 123 QGWEPPIWQTHLLVVGLLAIAAWGYWQLWQWWRSSASRGKHWLAIVALGSSLIVLPPAAL 182

Query: 190 -------------------MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                                +L+ + +  L R+      + IR+++    +L   ++  
Sbjct: 183 GLADYERYPRSGQMLLLLGALWLTVAAVDRLVRSPWGRVLKAIREDETVAIALGKNVLSY 242

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           KL + A+  A  G+AG F+A     I PD F+      V ++++LGG           A+
Sbjct: 243 KLQSLALGGAIAGLAGVFYAWQLTAIYPDNFRPQLTFDVWTMLVLGGTAHRFGPVLGAAV 302

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                 L   +                     L+ + L  +++ R   +L  R   +   
Sbjct: 303 FWLYDSLTRFLLPAILPLD---GSQIGALRIALVGLLLMALMIWRPQGILGRREELSLGR 359


>gi|149203612|ref|ZP_01880581.1| probable branched-chain amino acid transport system, permease
           component [Roseovarius sp. TM1035]
 gi|149142729|gb|EDM30771.1| probable branched-chain amino acid transport system, permease
           component [Roseovarius sp. TM1035]
          Length = 334

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 56/312 (17%), Positives = 115/312 (36%), Gaps = 28/312 (8%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
             A  ++ +   +  +ILI  M    L +V G  G++SL       +GAY Y IL ++ G
Sbjct: 21  FQAFTAEYFGLEILTEILILAMLVIALDMVAGFGGMVSLCHGALLGVGAYGYAILSTKVG 80

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L+    +  +  I+GA   ++G    +  G Y  +ATL   ++             G + 
Sbjct: 81  LTPVAAMGGAVAITGAIAWVIGAICARSHGIYFIMATLAFGQM-------------GYSY 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           ++ A                       +          L M        + + R+ +  +
Sbjct: 128 VFEAPLFGGDDGLGGIERLDLALIGLDLNDGRSFALFCLAMLAAIYGAAVLILRSGLGRS 187

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              +  N++   +L  T+   K   F +S    G+AG   A     +SP +  ++ +   
Sbjct: 188 LSGVMHNEQRMRALGLTVWRVKADVFGLSGLISGLAGVMAAQHVMFVSPGLLSWTVSGEA 247

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           + +VILGG+ +L       A+ + +      +  Y+                 ++ + L 
Sbjct: 248 LVVVILGGLGTLVGPLLGAAVFVLLKHEVGALTSYWH---------------LVVGVILI 292

Query: 330 LVILMRSHSLLR 341
            V++ R++ +  
Sbjct: 293 AVVMSRANGIFG 304


>gi|255659025|ref|ZP_05404434.1| amino acid ABC transporter, permease protein LivH [Mitsuokella
           multacida DSM 20544]
 gi|260848810|gb|EEX68817.1| amino acid ABC transporter, permease protein LivH [Mitsuokella
           multacida DSM 20544]
          Length = 295

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 95/303 (31%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G +++ G + L++      Y +GAY      ++  LSI   + +
Sbjct: 11  LINGISLGSIYALIALGYTMIYGIIKLINFAHGDIYMVGAYIGFFAITQAHLSIVPSLLI 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +++G  GM++   + K       I+ LI +      L                     
Sbjct: 71  SLVVTGFLGMLVERLAYKPLRHAPRISVLITAIGVSFFLEYTTMYFVSPT---------- 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T  ++          ++       +L     L   +   +++T    A R    + +
Sbjct: 121 -PRTFPAMFGDVAVTVGGIVINGQQMLILGITAVLMVILTYIVQKTKTGKAMRAASFDTE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           F + SA   +AG       + I P M      +      +LGG+
Sbjct: 180 TAELMGINSDRIISITFGIGSALAAVAGVLVGIYYNSIDPLM-GIMPGLKAFVAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L        IL  V  L  G     F     F               L LV+L+R   
Sbjct: 239 GILPGAVVGGLILGVVEALVSGFISSTFRDAAAF-------------AILILVLLVRPAG 285

Query: 339 LLR 341
           +  
Sbjct: 286 IFG 288


>gi|188580548|ref|YP_001923993.1| urea ABC transporter permease [Methylobacterium populi BJ001]
 gi|179344046|gb|ACB79458.1| urea ABC transporter, permease protein UrtC [Methylobacterium
           populi BJ001]
          Length = 373

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 42/341 (12%), Positives = 94/341 (27%), Gaps = 30/341 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
                  +    + A  S  ++ +      IY M A  +S+  G  G+L+L   IA+ + 
Sbjct: 15  AVYGLFFVAIAGIPAFVSDGFLLNQFAVYGIYGMLALSISLCWGFGGILNLGQGIAFGLA 74

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   +                 M++ +   +       +      +  LI+  +F  + 
Sbjct: 75  AYGMAMTMQMQSQDPDSNPIPPFMLNNSLEHLPWFWQPFWSTGGGILLALIVPTLFYVVF 134

Query: 138 IKWKPITNGKAGIYVAD----------------RLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                        +                           +        F +    Y  
Sbjct: 135 GTLMFRARVSGPFFAIMSLAMLSAFATLILDMQPYTNGANGISPPSPLSLFGTDIDPYGP 194

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             Y+++ G+          L ++      + +R + +    L   +   +   +A+S   
Sbjct: 195 TAYWIVCGLLIAVTVGAKLLTQSKFGLVIQALRGDPERVRFLGYNVALYETCIYAISGFI 254

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
             +AG  +      +SP     + +I ++    +GG  SL        ++ G        
Sbjct: 255 AALAGCLWVMLIQYVSPAQLDTTFSIGMVIWAGIGGRLSLLGAILGAFLIQGGQSYL--- 311

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         F      ++     +V+      L  L
Sbjct: 312 -----------GDQFLATWLLVLGAFFIVVVRFLPKGLAGL 341


>gi|86160676|ref|YP_467461.1| chain amino acid ABC transporter inner membrane subunit
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85777187|gb|ABC84024.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 310

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 54/311 (17%), Positives = 98/311 (31%), Gaps = 21/311 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS-------RYGLS 91
           + +      IY + A G ++V G L L++      Y +GA++   LGS          + 
Sbjct: 8   LVNGLSLGTIYALIALGYTMVYGVLKLINFAHGDVYMVGAFAGYYLGSVTGTDRAPGMVG 67

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L+   +  + GA G ++   + +   +   +  LI +     +L     ++       
Sbjct: 68  AALVTLGAMAVCGALGYVIERFAYRPLRNRARLTALITAIGVSFLLEYGFQLSPIVRTPV 127

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                         L          V         L+    L   + L + RT    A R
Sbjct: 128 EFPPGPSPRFFPALLELGEPLTFLGVTVPRIDLLGLVVALVLMIGLQLIVYRTRFGMAMR 187

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
               + +    +   +       F + SA    AG   A+SR +I   +F     +    
Sbjct: 188 AASFDPQVAGLMGIPVNRIISWTFVLGSALAAAAGIINASSRPKIE-PLFGLMSGLKAFV 246

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             +LGG+ S+        +L    E   G     +   + F               L LV
Sbjct: 247 AAVLGGIGSVPGAMVGGLVLGLTEEYVAGYTSSQYRDAIAFT-------------VLILV 293

Query: 332 ILMRSHSLLRL 342
           +L+R   L   
Sbjct: 294 LLVRPEGLFGR 304


>gi|229096479|ref|ZP_04227450.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus Rock3-29]
 gi|229115452|ref|ZP_04244858.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus Rock1-3]
 gi|228667865|gb|EEL23301.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus Rock1-3]
 gi|228686685|gb|EEL40592.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus Rock3-29]
          Length = 333

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 60/334 (17%), Positives = 131/334 (39%), Gaps = 31/334 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V+ L+           + +  +  QI I+ +FA    I++G  G++S    + + IGAY 
Sbjct: 15  VFMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDILLGYTGIVSFGHCMFFGIGAYG 74

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  R      + ++ I  + ++S     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 75  VALLFDRQGVSITNFFIGIIAAIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YYV          +
Sbjct: 135 EKWRGLTHGGDGFTFGVPEIFRDRF-------------------TFYYVTFICLINIFIL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGIVAAISGGLFVITLRFVN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L  +    
Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            R T ++ +   +V+L+    L+        ++R
Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGTVKQLKSVKR 320


>gi|220916922|ref|YP_002492226.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219954776|gb|ACL65160.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 313

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 106/301 (35%), Gaps = 29/301 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             + +L   +FA   ++++G  GLLS          AY+       +GL   + + +   
Sbjct: 28  FAMNVLCLALFASAFNLLLGYTGLLSFGHAAFLGASAYATGWALRSWGLPPEVAVLLGTA 87

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           ++ A G++ G  +++  G Y A+ TL  +++   ++++    T G+ G+    R      
Sbjct: 88  LAAALGLVFGALAIRRSGIYFAMITLGFAQLVYFLVVQLPW-TGGEDGLQGIPR------ 140

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                          +      Y+ +         ++     +   +  R IR+N+    
Sbjct: 141 -------GRALGLIPLDDPRTAYWFVYAAFLAGFWLLHRAIHSPFGHVLRAIRENEPRAV 193

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   KL AF +S+   G+AG   A      S     +  +  V+ + +LGGM ++
Sbjct: 194 SLGYDVARYKLLAFVLSAGVSGLAGGLKAVVLQFASLSDVHWHRSGEVVLMTLLGGMGTV 253

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              +    +++ +                          T +        ++     ++ 
Sbjct: 254 LGPSVGALLVVALENYLA---------------DTGSWVTVITGAVFVACVVAFRRGIVG 298

Query: 342 L 342
            
Sbjct: 299 E 299


>gi|150017621|ref|YP_001309875.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052]
 gi|149904086|gb|ABR34919.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052]
          Length = 294

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 92/305 (30%), Gaps = 23/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A G ++V G + L++      Y +GA+      +  GL     +  
Sbjct: 8   IVNGICLGSVYALIAIGYTMVYGIIKLINFAHCDIYMVGAFLGYFAATVLGLGFIPSLIF 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +     GM++   + K   +   +  LI +   + IL  +                  
Sbjct: 68  SMVSCAVLGMLIERIAYKPLRNSPNVTLLITTMGMELILQNFVKADFVAGPN-------- 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I    +    +         L     L  ++   + +T    A R    ++ 
Sbjct: 120 -TRNFPEVIPLISYKIGAITISNLQIIALAITIILCVALQYLVNKTRTGRAMRATSYDRD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   I       FA+ SA    AG        R+ P M      +      +LGG+
Sbjct: 179 AAALMGININRVISLTFALGSALAATAGVLVGMLYPRLEPAM-GVMPGLKSFVAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +         +  +  L         +  + F               L ++++++   
Sbjct: 238 GIIPGAMFGGLAMGLIETLSKVYISSGLSDAIAFS-------------ILIIILIVKPTG 284

Query: 339 LLRLR 343
           L   +
Sbjct: 285 LFGKK 289


>gi|121610871|ref|YP_998678.1| ABC transporter-like protein [Verminephrobacter eiseniae EF01-2]
 gi|121555511|gb|ABM59660.1| ABC transporter related [Verminephrobacter eiseniae EF01-2]
          Length = 625

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 49/337 (14%), Positives = 108/337 (32%), Gaps = 10/337 (2%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           +++   L    +    L  L L       +   +   I +Y + A GL ++ G  G+ S 
Sbjct: 15  SRFMHRLTRARLTLAALALLVLCWGWLPDFSVVLLCHIALYALVALGLVLLTGIGGMTSF 74

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                  IGAY+   + +      WL   V        G+ +GL         L   TL 
Sbjct: 75  GQAAFVGIGAYATAWVCTAPAPVQWLAGAVGMAGLPWVGLALGLALTTVLAWGLGAVTLR 134

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +S  +  +                 +  +  G T  + +         +     +  ++ 
Sbjct: 135 LSGHYLPLCTIA---WGLSLYYLFGNMSFLGGQTGITGVPPLVLGGLSLAAPRAIGLLIW 191

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  L+  ++  L  +    A R ++  +    S+       ++  F +++    ++G  
Sbjct: 192 ALLLLALWLLHNLLDSRAGRAIRALKGARVMAESMGVDTARYRIRLFVLAALLAALSGWL 251

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +A  +  +SP  F     I  + + ++GG   L        ++  + E           S
Sbjct: 252 YAHLQRFVSPTPFNLHIGIEYLFMAVVGGAGHLGGAVLGATLITLLKEKLQDWLPSLLGS 311

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
              F          +  + + LV+   +  L  +   
Sbjct: 312 SGNF-------ELIVFGLLMVLVLQRFADGLWPMLER 341


>gi|296135255|ref|YP_003642497.1| inner-membrane translocator [Thiomonas intermedia K12]
 gi|295795377|gb|ADG30167.1| inner-membrane translocator [Thiomonas intermedia K12]
          Length = 326

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 55/302 (18%), Positives = 125/302 (41%), Gaps = 16/302 (5%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           +G++++ + +FA   +++ G  GL+S      +    Y   +  + +G    L I     
Sbjct: 31  LGMRMMCFALFACAFNLLAGYAGLISFGHAALFGGAGYLTGLALTTWGWPTPLGILTGVA 90

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G++MGL +++  G Y ++ TL +++I     ++    T G+ G+    R    G 
Sbjct: 91  TALLIGLVMGLLAVRRSGIYFSMITLALAQIVYFYALQA-HFTGGEDGLQGIPRGTLFGL 149

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++S                 MYY++L +   S   +  +  +      + +R+N+    
Sbjct: 150 PLQSDR--------------VMYYLVLAVFVASWWFMRRVVNSPFGQVLQAVRENEPRAI 195

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   KL  F +S+ F G+AGA  A      +     +S + +VI + ++GG+ + 
Sbjct: 196 SLGYRVNRYKLGVFLISAGFAGLAGAMKAVVMGFETLTDVHWSTSGLVILMTLVGGLRTD 255

Query: 282 SKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                   I+  + E    ++ +    + + +    N   + ++     L +L+    ++
Sbjct: 256 LGPILGAVIITVLEEKMGTISRFLVHATGVDWFHQLNDSVSMVIGAIFVLCVLLFRRGIV 315

Query: 341 RL 342
             
Sbjct: 316 GE 317


>gi|229155547|ref|ZP_04283655.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus ATCC 4342]
 gi|228627865|gb|EEK84584.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus ATCC 4342]
          Length = 333

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 59/325 (18%), Positives = 128/325 (39%), Gaps = 31/325 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 15  VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  R      +  + +  + +IS     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 75  VALLFDRQGVSITNFLIGLVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YYV L    +   +
Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L  +    
Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
            R T ++ +   +V+L+    L+  
Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGT 311


>gi|90424445|ref|YP_532815.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90106459|gb|ABD88496.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 323

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 49/286 (17%), Positives = 110/286 (38%), Gaps = 14/286 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++   ++   L             +Q L + + A   ++++G  GLLS    +      Y
Sbjct: 21  MIAFAVMTALLAVVPLTGVYPFFVMQGLCFALLACAFNLLIGYGGLLSFGHAMFLGTAGY 80

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +       +G+S  L I +    + A G+I GL +++ +G Y A+ TL +S++   + ++
Sbjct: 81  ASAHALKVWGVSPELGILIGTAAAAALGVITGLVAIRRQGIYFAMITLALSQLLYFVYLQ 140

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                                  ++ + +   F    +     +YYV+L    L   +I 
Sbjct: 141 --------------TPFTHGEDGIQGIPQGHLFGFIDLGKPTTLYYVILVGFLLGFLVIY 186

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
               +      + IR+N+    SL       KL A+ +S+   G AG+         S  
Sbjct: 187 RAINSPFGEVLKAIRENEPRAISLGYKTDHYKLLAYILSATLAGFAGSLKVFVAQNASLT 246

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
              ++ +  ++ + ++GG+ ++        ++I + +   G   + 
Sbjct: 247 DVHWTMSGEIVLMTLVGGLGTIYGPVVGAFVIIAMQQYLAGFGQWV 292


>gi|227485098|ref|ZP_03915414.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Anaerococcus lactolyticus
           ATCC 51172]
 gi|227236931|gb|EEI86946.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Anaerococcus lactolyticus
           ATCC 51172]
          Length = 295

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 102/307 (33%), Gaps = 29/307 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS----YVILGSRYGLSIWL 94
             +      IY + A G ++V G   L++        +G Y+      +   + GL +WL
Sbjct: 7   FFNGLQLGSIYALVALGYTMVYGIAKLINFAHGDIIMVGGYTVFLAIGLPLFKTGLPLWL 66

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
            +  + ++    G+++   + K   +   I+ LI +      L              +  
Sbjct: 67  AVVPAVIVCTLLGVLIERVAYKPLRNSSRISLLITTIGVSLFLQNLFVKIFTSNAKPLPA 126

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                                 V   +     ++    L+  + L++ +T    A   + 
Sbjct: 127 LFPQ-----------KSLSFGDVHLSLATVITIISTIILTYLLNLFVNKTKYGKAMLAVS 175

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           ++  A   +   +       FA+ SA  G+A   + AS  +I P M      I   +  +
Sbjct: 176 EDYGAAELVGINVNQVMTMTFAIGSALAGVASVLYVASYPQIQPFM-GSMLGIKAFTAAV 234

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           LGG+ S+        IL  +  L        +                ++ + L LV+L+
Sbjct: 235 LGGIGSIPGAVVGGLILGIIEVLTRAYLSSAYADA-------------IVFVILILVLLI 281

Query: 335 RSHSLLR 341
           + + L  
Sbjct: 282 QPNGLFG 288


>gi|292558834|gb|ADE31835.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus suis GZ1]
          Length = 308

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 77/325 (23%), Positives = 135/325 (41%), Gaps = 42/325 (12%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI- 83
           L  +         Y   +  QI I ++ A GL+++VG  G  SL      AIGAY+  I 
Sbjct: 14  LFKVLYQPGILNFYYIQIVQQIGIQIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAVGIL 73

Query: 84  -LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
                      + + V  +ISGA  +++G+P+L+ +GDYLAIATL ++EI + ++I    
Sbjct: 74  GKMMPTYGGFAIALIVGMLISGAVALLVGIPTLRLKGDYLAIATLGVAEIIRILIINGGS 133

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +TNG AGI                                   ++     ++  + +   
Sbjct: 134 VTNGAAGIMSIPLFTSWP-------------------------LVYIFVIITTLVTVNFL 168

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+ +  A  ++R+++ A  S+     F K+SAF   +    +AG   A     I P  F 
Sbjct: 169 RSPMGRATISVREDEIAAESVGVNPTFVKVSAFVFGAMTAAIAGGLHAGYVGTIVPKDFA 228

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  ++ V+ I++LGG+ S++    A  +L  +                      +     
Sbjct: 229 FMTSVNVLIIIVLGGLGSITGTFVAAIVLGILNVFLKSY---------------SDISMI 273

Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347
           +  +AL L+++ R   LL  +  S 
Sbjct: 274 IYSLALILLMIFRPGGLLGTKEFSV 298


>gi|226946399|ref|YP_002801472.1| LivM family inner-membrane translocator [Azotobacter vinelandii DJ]
 gi|226721326|gb|ACO80497.1| Bacterial inner-membrane translocator, LivM family [Azotobacter
           vinelandii DJ]
          Length = 352

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 67/326 (20%), Positives = 131/326 (40%), Gaps = 16/326 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +   + F+ +       +++++ I  L+  +   GL+++ G  G  S+      A+GA
Sbjct: 26  LAILLAVAFVLVPWLGDDYWLNAILIPFLVLSLAGLGLNLLTGYTGQTSVGAAGFMAVGA 85

Query: 79  YS-YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           ++ Y +L    GL + L +     I+ A G++ G+PS + +G YL + TL      + + 
Sbjct: 86  FASYGLLLRVPGLPLPLALAGGGAIAAAVGLVFGIPSNRIKGFYLMVTTLAAQFFLEWVF 145

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            K+    N  +   ++                       +      Y ++LG   L   +
Sbjct: 146 TKFPWFYNHASSGTISAPRLE-------------LFGLDLHAPAGRYLLVLGCVTLLTWV 192

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRI 256
            + L R+ I   W  IRD   A   +   +   K  AFAVSS ++G+AGA +A A     
Sbjct: 193 AVNLVRSQIGRNWMAIRDMDTAAAVIGIPVDGYKRLAFAVSSFYLGVAGALWAFAYLGTA 252

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           S   F  + +  ++ I+I+GGM S++      A +  +  L   +        +      
Sbjct: 253 SAGSFDINRSFQILFIIIIGGMGSIAGNFVGAAFISLLPLLLNQIGQGLLGGNVDAG-QL 311

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
                 +  + +   ++     L+RL
Sbjct: 312 QNLQKIIFGVLIIWFLVKEPEGLIRL 337


>gi|226356193|ref|YP_002785933.1| branched-chain amino acid ABC transporter permease [Deinococcus
           deserti VCD115]
 gi|226318183|gb|ACO46179.1| putative Branched-chain amino acid ABC transporter, permease
           component [Deinococcus deserti VCD115]
          Length = 340

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 46/332 (13%), Positives = 98/332 (29%), Gaps = 19/332 (5%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY------ 81
           L          I    +   +Y + A G ++V G L L++      +  GA         
Sbjct: 3   LATLLPFLVNVIVGGLVIGFVYAIIALGYTMVYGVLQLINFAHSEVFVTGAIVGFEVFRL 62

Query: 82  -VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                    L + + +  + +ISG   +++   + +   +   +  LI +     IL   
Sbjct: 63  LANNPMNGYLKLIIALASAMLISGLLNVLIERLAYRPLRNAPKLVPLITAIGVSLILQDL 122

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFF---------RFPSSFVIYEIFMYYVLLGMC 191
             +          D  Y L     +                    +  ++    ++    
Sbjct: 123 LKLFEAFQTPSRFDLTYTLPQGFAAPFCGTESSCAPFGTFLKGIGIEVQLKDVIIIGVSL 182

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
              A +   +  T +    R +  ++     +         + FA+  A  G++G  F  
Sbjct: 183 LSLALLNHLVNHTRLGKGIRAVAQDRVTAGLMGIDSNRMISATFAIGGALGGVSGVLFGM 242

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               ++     F   II  +  +LGG+ S+         L  +  L  G           
Sbjct: 243 KIGTVNAYS-GFDPGIIAFTAAVLGGIGSIPGAVLGGLTLGVIQNLIGGAFSVLGGLWQV 301

Query: 312 FDCSFNMRHTTLMV--IALFLVILMRSHSLLR 341
            +          +   I L L+++ +   LL 
Sbjct: 302 SNLEAIDASYQRIGAFIVLVLILIFKPTGLLG 333


>gi|197124775|ref|YP_002136726.1| inner-membrane translocator [Anaeromyxobacter sp. K]
 gi|220919494|ref|YP_002494798.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1]
 gi|196174624|gb|ACG75597.1| inner-membrane translocator [Anaeromyxobacter sp. K]
 gi|219957348|gb|ACL67732.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 310

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 56/311 (18%), Positives = 98/311 (31%), Gaps = 21/311 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS-------RYGLS 91
           + +      IY + A G ++V G L L++      Y +GA++   LGS          + 
Sbjct: 8   LVNGLSLGTIYALIALGYTMVYGVLKLINFAHGDVYMVGAFAGYYLGSVTGTDRAPGMVG 67

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L+   +  I GA G ++   + +   +   +  LI +     +L     ++       
Sbjct: 68  AALVTLGAMAICGALGYVIERFAYRPLRNRARLTALITAIGVSFLLEYGFQLSPIVRSPV 127

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                         L          V         LL    L   + L + RT    A R
Sbjct: 128 EFPPGPSPRFFPALLELGEPLTFLGVTVPRIDLLGLLVALLLMIGLQLIVYRTRFGMAMR 187

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
               + +    +   +       F + SA    AG   A+SR +I   +F     +    
Sbjct: 188 AASFDPQVAGLMGIPVNRIISWTFVLGSALAAAAGIINASSRPKIE-PLFGLMSGLKAFV 246

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             +LGG+ S+        +L    E   G     +   + F               L LV
Sbjct: 247 AAVLGGIGSVPGAMVGGLVLGLTEEYVAGYTSSQYRDAIAFT-------------VLILV 293

Query: 332 ILMRSHSLLRL 342
           +L+R   L   
Sbjct: 294 LLVRPEGLFGR 304


>gi|121611381|ref|YP_999188.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121556021|gb|ABM60170.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 295

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 54/307 (17%), Positives = 111/307 (36%), Gaps = 19/307 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            ++  +     IY + A GL+I  G  GLL+   +    IGAY+  I     G  +   +
Sbjct: 3   DFLTYLLTIGGIYAIMALGLNIQAGYGGLLNFGHIAFAGIGAYATGI-AHARGWPVPAGM 61

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +   ++ A G  +G    +   DY  IATL ++EI + + +    +T G  GI     L
Sbjct: 62  ALGMALATALGWCIGRLGRRLAADYWGIATLAVAEILRTVALNEDWLTGGANGISAIPGL 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           +       + + F       V                   +   L       A R +R+ 
Sbjct: 122 FENQPRPWNELLFMALVLGLVALLA--------------WLSARLGDGRFGRAIRLMREQ 167

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    +   +   K       +A   +AG+ +A   +   P+    +E  ++ +++++G
Sbjct: 168 PQLAACMGYDLQSLKTRTVMSGAAVTALAGSLYALQMNFAGPEFLLAAETFVLWTMLMVG 227

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+   + +     +L    +       +  + L             ++ + L   +L+R 
Sbjct: 228 GIGRTAGVLLGVVLL----QAVHAFVPFAKDMLGFDSDRAGALRLGMIGLILLACLLLRR 283

Query: 337 HSLLRLR 343
             LL  +
Sbjct: 284 EGLLPEK 290


>gi|281412339|ref|YP_003346418.1| inner-membrane translocator [Thermotoga naphthophila RKU-10]
 gi|281373442|gb|ADA67004.1| inner-membrane translocator [Thermotoga naphthophila RKU-10]
          Length = 808

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 92/303 (30%), Gaps = 28/303 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L+ V   + L +      + + I ++ + +    + ++G+++V+ + G + L+     
Sbjct: 13  IFLILVAIVVFLGVTTREFLTVENIFTVILNVSFIAIMSFGMTMVIITSG-IDLSVGSIL 71

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              +    +L    GLS +L + +   +    G+  GL   K R         ++S    
Sbjct: 72  GAASVVMGLLMDEKGLSPFLSVVIGLAVGVGFGLANGLLITKARLAPFISTLGMLSV--- 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                         G+       +  +                +    +Y  ++G     
Sbjct: 129 ------------GRGLAYVMSGGWPISPFPESFTVHGQGMVGPVPVPVIYMAVIG----- 171

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               ++L+ T        I  N +A   +        +  + ++      AG    A   
Sbjct: 172 VIAHIFLKYTVTGRRIYAIGGNMEASKLVGIKTDRILILVYTINGFLAAFAGFLLTAWLG 231

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            ++         + VI+  ++GG        ++        I+  +      +      +
Sbjct: 232 -VAQPNAGQGYELDVIAATVIGGTSLSGGEGTILGAFLGAVIMGVLRNGMILLGGIVILA 290

Query: 309 LLK 311
              
Sbjct: 291 ASG 293


>gi|85706577|ref|ZP_01037670.1| putative branched-chain amino acid transport system permease
           [Roseovarius sp. 217]
 gi|85668989|gb|EAQ23857.1| putative branched-chain amino acid transport system permease
           [Roseovarius sp. 217]
          Length = 339

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 84/324 (25%), Positives = 139/324 (42%), Gaps = 18/324 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             V+ LL  L         Y++S  +  LI+   A GL++V G  G L L      A+GA
Sbjct: 10  LAVFFLLFGLGAPFIIPSLYLNSYMLPWLIWTAAALGLNLVTGWAGQLHLGYAAVMAVGA 69

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           YS  I  +R+G+     + +  + S   G +    +L+ +G YLA+ TL M  +   +L 
Sbjct: 70  YS-AIHAARFGVPWEFALIIGGLASSVIGSLFAFAALRVKGLYLALTTLAMQFVMDWVLN 128

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               I+ G      +  L  LG  + S   F              YYV  G C L    +
Sbjct: 129 HSPAISGGSHASLQSPTLALLGQEITSDTGF--------------YYVAFGWCVLVTIFM 174

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-IS 257
           L L+RT +  A   +R+   A   L     + K+ AFA SS   G++GA   A+     +
Sbjct: 175 LNLKRTGLGRALVAVREKDFAAAILGVNSFYYKILAFATSSFIAGVSGALLVATFFFLAA 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F  + +I V+++VI+GG++S+       A+++ V  L  G       SL        
Sbjct: 235 PEQFSVNVSIQVLAMVIVGGLSSIIGSYFGVALILLVPGLVNGFVVVTSQSLGMQINVET 294

Query: 318 MRHT--TLMVIALFLVILMRSHSL 339
           + H    +    + +++L+    L
Sbjct: 295 LAHIPNAVYGALIVIILLIEPLGL 318


>gi|167563795|ref|ZP_02356711.1| putative amino acid ABC transporter, permease protein [Burkholderia
           oklahomensis EO147]
          Length = 394

 Score = 86.5 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 48/347 (13%), Positives = 97/347 (27%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 51  IAVGVGVPLAALVTPESSAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 110

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 111 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHQLPWYWSGTGYLAYALALVVLVPA 170

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            Y  +  +          R   F  +
Sbjct: 171 AVAWVFGFFTFRSRVKGVYLSIITQAATFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 230

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  ++ +       S      +  + +      IRD +     L  + +  KL  +
Sbjct: 231 SPGTRTVLFLMTFATLVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 290

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+   G+AGA +      I+P       +I ++  V +GG  +L         + G  
Sbjct: 291 VVSAVLCGIAGALYVPQVGIINPSEMSPGNSIEMVIWVAVGGRGTLIGPIVGAFAVNGAK 350

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +                  F       + +   LV L+    ++ L
Sbjct: 351 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 383


>gi|330816621|ref|YP_004360326.1| ABC transporter, permease/ATP-binding protein [Burkholderia
           gladioli BSR3]
 gi|327369014|gb|AEA60370.1| ABC transporter, permease/ATP-binding protein [Burkholderia
           gladioli BSR3]
          Length = 768

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 49/302 (16%), Positives = 102/302 (33%), Gaps = 12/302 (3%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
               +  + L +       Q  + +   Q    V+ A   ++++GS GLLS        +
Sbjct: 10  AAGWLALVGLLVLPALIWPQGAVLAWLAQTAALVVLALSYNLLLGSTGLLSFCHAAFAGL 69

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +R+G ++  L     +     G++ G  + +  G   A+ TL + E+    
Sbjct: 70  GAFVAAHAFNRFGFALPWLPLAGGLGGAGFGLLFGAIATRRAGTAFAMITLGLGELIAAA 129

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                     +     +   Y ++   C LSA 
Sbjct: 130 AWSVPDWFGGAGGLAI------------DRAAGAPLGAWRFGADREAYALIAAWCLLSAL 177

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  +  T  +   R +RD  +   +L T     +L    +++ F G+AG       +  
Sbjct: 178 AMRVVLATPFARLARAVRDKPRRVAALGTDPRRVRLLMMVIAAFFAGVAGTLTLIDVELA 237

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           S D      +  V+   ++GG           A++        G++  +   L     + 
Sbjct: 238 SSDSVSMLRSATVLFATVIGGSGGFFGPVLGAAVMAAFGSFVAGLSRAWLFYLGLLFVAV 297

Query: 317 NM 318
            +
Sbjct: 298 VV 299


>gi|169830085|ref|YP_001700243.1| high-affinity branched-chain amino acid transport system permease
           [Lysinibacillus sphaericus C3-41]
 gi|168994573|gb|ACA42113.1| High-affinity branched-chain amino acid transport system permease
           protein [Lysinibacillus sphaericus C3-41]
          Length = 291

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 101/303 (33%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      + IG++      +++ L  +  + +
Sbjct: 7   LVNGISLGSIYALIALGYTMVYGIIKLINFAHGDVFMIGSFIGFYAIAKWELGFFPALLL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I    G+++   + K   +   IA LI +     ++        G            
Sbjct: 67  AMLICAIFGVLIERIAYKRLRNATRIAALITAIGVSLLIEYTTIFFRGAQPAAYP----- 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  + +   F    V        +L     L   +   + +T I  A R +  +  
Sbjct: 122 ------EVFKNKSFDILGVQISSTSILILSVAVVLMILLQFIVHKTKIGKAMRAVSHDAD 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +     + FA+ SA  G AG  F     +I P M      +      +LGG+
Sbjct: 176 AARLMGINVDNTISATFAIGSALAGAAGVIFGVYYTKIDPLM-GVIPGVKAFIAAVLGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        +L  V  L   + F  +     F             + L L+++ R   
Sbjct: 235 GIIPGAMVGGMLLGVVESLVSALGFSLWRDAAAF-------------VILILILIFRPSG 281

Query: 339 LLR 341
           +  
Sbjct: 282 IFG 284


>gi|152981369|ref|YP_001353498.1| ABC-type branched-chain amino acid transport system, permease
           component [Janthinobacterium sp. Marseille]
 gi|151281446|gb|ABR89856.1| ABC-type branched-chain amino acid transport system, permease
           component [Janthinobacterium sp. Marseille]
          Length = 365

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 53/346 (15%), Positives = 106/346 (30%), Gaps = 32/346 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L  +    L F    A     Y  ++  + + Y M A  L +V G  G+LSL   + +
Sbjct: 23  VVLALLPIMNLCFPADHALHISSYTIALVGKFMCYAMAALALDLVWGYTGILSLGHGVFF 82

Query: 75  AIGAYSYVILGSRYG----------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           A+G Y++ +   R                + +                 ++        +
Sbjct: 83  ALGGYAHGMYLMRSIGRDGVYQSNLPDFMVFLNWKEYPWYWWMTEHFWFAMLLVVLVPGL 142

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT--------VRSLIRFFRFPSSF 176
              I         IK    +     +  A  L F                 R   F  + 
Sbjct: 143 LAFIFGYFAFRSRIKGVYFSIITQAMTFAFMLLFFRNDTGFGGNNGFTDFKRILGFTITD 202

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
              +  +Y V L     +  +   +  + +    + +RD++     +    ++ KL  + 
Sbjct: 203 PSTKAVLYLVTLAFLLAALFVCRAIVTSKLGRVLQGVRDSESRLMFIGYNPLWFKLFVWT 262

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           +S+   G+AGA +      I+P     + +I ++    +GG  SL         + G+  
Sbjct: 263 LSAVVCGIAGALYVPQVGIINPSEMSPANSIEMVIWAAVGGRGSLLGPIIGAFTVNGLKS 322

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                          F  +F       + +    V L     +L L
Sbjct: 323 W--------------FTAAFPDLWLYALGLIFIFVTLFMPQGILGL 354


>gi|91780954|ref|YP_556161.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693614|gb|ABE36811.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter membrane protein 1,
           HAAT family [Burkholderia xenovorans LB400]
          Length = 656

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 53/285 (18%), Positives = 112/285 (39%), Gaps = 14/285 (4%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             LL     G         +  ++IL + +FA   +++ G +GL++      +    Y  
Sbjct: 326 LYLLFLGGFGIVAPHFVYPTFLMEILCFALFACAYNLIFGYVGLVAFGHAAFFGAAIYVA 385

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                 +G+S  L I +  + S   G+++G  +++ RG Y A+ TL ++++     ++  
Sbjct: 386 AQTAKFWGISPELAILLGTLASTMLGLVVGAIAIRRRGLYFAMITLALAQLVYFYGVQAS 445

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
                                ++ + R   F    +  +  +YY +L +     +++   
Sbjct: 446 WTKG--------------EDGLQDVPRGKLFGLFSLHQDAVLYYFVLAVFLTGFAVVHRA 491

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R+      R IRDN++   SL       KL AF +S+   G+AG   A      + +  
Sbjct: 492 VRSPFGKVLRAIRDNEQRAVSLGYDTDRLKLIAFTISAGLSGLAGGTMAIVFQVATLNNL 551

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
            F+ +  V+ IV++GG  ++        I++ +         +  
Sbjct: 552 FFTTSAEVLLIVLIGGAGTILGPVVGAVIVVSMGHYLASTGSWVL 596



 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 99/303 (32%), Gaps = 17/303 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +    Y + + G++++ G L + +      + +GA+    L     L   L +P 
Sbjct: 13  LLIGLVNGSFYALMSLGVAVIFGMLRIANFVHGAQFMLGAFLGWFLLGLPTLFPGLGLPS 72

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                    + + + ++    + L I+     +    +L+    ++    GI+       
Sbjct: 73  VGYWPALVIVPLAIGAVGVLTEKLFISRAYKLDPSYGVLLTL-GLSLVIEGIFHVGFGSS 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L     +   F+    +  +VL     +       + RT +    R   +N  
Sbjct: 132 GKPYDVPLELANGWDLGFLYLPFYRAWVLAASMLICFGTWYLIERTRLGAYLRAATENPV 191

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              S    +       + +     G+AG   A             +  I+V +IV++GGM
Sbjct: 192 VVESFGINVPRMLTLTYGLGVGLAGLAGLMAAPIYQV--SPQMGQNIIIVVFAIVVIGGM 249

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     +   L  +  L                  +    +T++ + + +V+++R   
Sbjct: 250 GSIFGAIFSGFALGLIEALTKVF--------------YPQASSTVIFVIMAIVLVVRPQG 295

Query: 339 LLR 341
           L  
Sbjct: 296 LFG 298


>gi|319794095|ref|YP_004155735.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315596558|gb|ADU37624.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 355

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 59/319 (18%), Positives = 118/319 (36%), Gaps = 11/319 (3%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                     S+  +IL++V+      +++G  G++S    + + IGAY   I  SR G 
Sbjct: 32  PFIFPGVKALSVAAKILVFVVLVASFDLLLGYTGIVSFAHTMFFGIGAYGIAISASRLGP 91

Query: 91  SI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
           +     + +  S  IS      +GL SL+ R  + A+ TL ++  FQ +  +    T G+
Sbjct: 92  NWGAVLVGLGASLAISLVLSFAIGLFSLRVRAIFFAMITLAVASAFQTLASQLSDFTGGE 151

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
            G+          +   S   F           +  YY+L     +    +L +  +   
Sbjct: 152 DGLTFKLPELISPSFEFSEEPFLGVSLDG---RLLCYYLLFVAAVVLVLALLRIVNSPFG 208

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-ISPDMFKFSEN 266
              + IR+N+    ++   ++  + +A  +S+ F  +AGA  A             F   
Sbjct: 209 RVLQAIRENEFRAEAIGYRVVVYRTTAAVLSALFATLAGAMLAIWLRYNGPDTSLSFEIM 268

Query: 267 IIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           I V+ IV++GGM ++   A    + +     + +L    +                R   
Sbjct: 269 IDVLLIVVIGGMGTIYGAAIGAVLFVVAQSYLQDLLRLGSEAASGLPWLAALLSPDRWLL 328

Query: 323 LMVIALFLVILMRSHSLLR 341
            + +   L +      ++ 
Sbjct: 329 WLGVLFVLSVYYFPTGIVG 347


>gi|319792076|ref|YP_004153716.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315594539|gb|ADU35605.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 309

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 97/305 (31%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G + L++        +GA +   +       +      
Sbjct: 8   IINGLVLGSMYALIALGYTMVYGIINLINFAHGEVLMVGALTSWTIIGLMKDGMPNTPGW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++       +   +L F  + +A   L  S     ++         +    +  +   
Sbjct: 68  LVLLIALIIACIVAATLNFVIEKVAYRPLRNSPKLAPLITAIGMSILLQTLAMIIWKPTN 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+          +       +L    F    ++  +  T +  A R   +N +
Sbjct: 128 --KAYPNLLPTDPIHVGGAVISPTQVMILSVTAFSLVVLMWLVNYTKLGRAMRATAENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + F + +    +AG  +A++   I+     F   +   +  + GG+
Sbjct: 186 VAALMGIRPDMVISATFIIGAVLAAIAGVMYASNYG-IAQHAMGFLPGLKAFTAAVFGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  +  G        +L      +        I L +++ +R   
Sbjct: 245 GNLAGAVVGGILLGLIEAIGSGYIGTLTGGVLG-----SNYSDIFAFIVLIVMLTLRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|115525783|ref|YP_782694.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115519730|gb|ABJ07714.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 337

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 69/303 (22%), Positives = 129/303 (42%), Gaps = 16/303 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
            +K+         +L+ LF     ++ ++       LIY +    L+I+ G  G  SL  
Sbjct: 19  KNKLALGYLASTIILVLLFAVPLFAKNFVIFQMTMWLIYAIAILALNILTGGSGQFSLGQ 78

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
              YA+GAY+  IL    G++  L +PV+ +I  A G + GLP+L+  G YLA+AT  ++
Sbjct: 79  SAFYALGAYTSAILMEHGGVNYALTLPVAGIICFASGFLFGLPALRLSGIYLALATFALA 138

Query: 131 EIFQNILIK--WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                +L    ++  T G  G+ V       G  +   +               +YY  L
Sbjct: 139 TAMPQLLKLGVFEHWTGGVQGLVVTKPDAPFGLPMSQDMW--------------LYYFTL 184

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  +     + L ++    A   IRDN+ A  ++   +   K  AF +S+   G+AG  
Sbjct: 185 VISIVIYVFSVNLLKSRTGRAMMAIRDNEIAASAMGVDVSLYKTLAFGISAGTTGVAGGL 244

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            A +   ++PD +     I +   +++GG+  L      +A ++ V  +   ++     +
Sbjct: 245 GAIAVQFVAPDGYTIQLAIALFLGMVVGGVGWLPGSLAGSAFIVFVPNMAESISKGLSGA 304

Query: 309 LLK 311
           +  
Sbjct: 305 VFG 307


>gi|283797881|ref|ZP_06347034.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Clostridium sp. M62/1]
 gi|291074571|gb|EFE11935.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Clostridium sp. M62/1]
 gi|295091909|emb|CBK78016.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           (TC 3.A.1.4.-) [Clostridium cf. saccharolyticum K10]
          Length = 294

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 100/307 (32%), Gaps = 23/307 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      +Y + A G ++V G   +L+        +G ++   + S  G S  L +
Sbjct: 6   SYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDIIMVGGFTTFTVVSTMGGSPLLGV 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + ++    G+ +   + +       +A LI +     +L     +  G         +
Sbjct: 66  LAAVVVCTVLGVTVERVAYRPLRGASPLAVLITAIGVSYLLQNVALLIFGSNARQFTSVV 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +             +         +     +   ++L++ +T I  A   + ++
Sbjct: 126 NVPPLKLAG---------GALSISGVTIVTIAACIIIMIGLMLFINKTKIGQAMLAVSED 176

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ SA   +AG    ++   ++P        I      + G
Sbjct: 177 RGAATLMGINVNGTIAVTFAIGSALAAIAGVLLCSAYPSLTPYT-GSMPGIKAFVAAVFG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        +L  +  L         +  + F               L +V+L+R 
Sbjct: 236 GIGSIPGALIGGVLLGVIENLAKAYISSQLSDAIVFS-------------VLIIVLLVRP 282

Query: 337 HSLLRLR 343
             +L  +
Sbjct: 283 TGILGKK 289


>gi|224367608|ref|YP_002601771.1| LivM2 [Desulfobacterium autotrophicum HRM2]
 gi|223690324|gb|ACN13607.1| LivM2 [Desulfobacterium autotrophicum HRM2]
          Length = 315

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 72/323 (22%), Positives = 137/323 (42%), Gaps = 31/323 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
              ++ + L    +     ++G   LI+ +      I++G  G+ ++   + + IGAY+ 
Sbjct: 12  VIFIIAMLLFPALADSKWLAIGSTFLIFSVVGLSEDIILGKGGMFNMGHALFFGIGAYTA 71

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-IKW 140
            I    +G+ I   IP++ +I   CG+++  P +  RGDYL +AT+  + +F  ++    
Sbjct: 72  AIANKSFGIPILYSIPLAIIIPALCGIVLAGPIIHLRGDYLLVATIGFNIVFLQLVENNI 131

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             IT G  GI+  D                 F    +     +YY+ +G+  L+  I+  
Sbjct: 132 FGITGGPNGIFGLDTPS--------------FLGMDLASPTAIYYLGVGVLILTFFIMAN 177

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L R+    A   +R ++ A  S+       KL AF + +   G+AG   A     +SP+ 
Sbjct: 178 LDRSKAGRALHYLRLDELAANSIGINTRGYKLFAFGLGAGIAGLAGVLLAIQYSAVSPEA 237

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F F ++++  SIV++GG  SL  I   T ++  + E+                  F    
Sbjct: 238 FNFMQSVLFFSIVLVGGS-SLPGILMGTFVMFVLPEIFR---------------DFATWR 281

Query: 321 TTLMVIALFLVILMRSHSLLRLR 343
             +   A+   +++R   +   R
Sbjct: 282 YFIFGFAMIFAMILRPEGIFPAR 304


>gi|222102748|ref|YP_002539787.1| ABC transporter membrane spanning protein (branched chain amino
           acid) [Agrobacterium vitis S4]
 gi|221739349|gb|ACM40082.1| ABC transporter membrane spanning protein (branched chain amino
           acid) [Agrobacterium vitis S4]
          Length = 363

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 61/324 (18%), Positives = 118/324 (36%), Gaps = 19/324 (5%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  +   L        +        IL  +  A   +++ G  GL+S+   +    GAY+
Sbjct: 33  LILVFAVLAFAPFFVSRGTVQNLFYILTMLTLAQSWNLLAGYAGLISVGQQLFVGCGAYA 92

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
              +    G++  + IP++ + +    +   L + +  G Y AI T +++E+ + +  +W
Sbjct: 93  LFAMVILLGVNPLIAIPLAGVFATIVALPTALFTFRLHGSYFAIGTWVIAEVGRLVFAQW 152

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           K +  G        R         S I         V  +   Y++ L +   +   +  
Sbjct: 153 KTLGGGTG--ASLPREATREMFGVSTISALFGMKPAVALDSLAYWLALLLTGFTIVFVYR 210

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L R+        +RDN+ A  +L    +  KL+ + +++A  GM GA     + RISPD 
Sbjct: 211 LLRSKQGLGLAAVRDNETAATALGVDALRLKLTIYLLTAALTGMTGALIYLQKARISPDA 270

Query: 261 FKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                     V+ IV++GG+ ++        IL  +  L      +Y   L         
Sbjct: 271 AFSLTDWTAYVLFIVVVGGIGTIEGPIVGVIILFFLQNLLSDFGSWYLLLLGALAILT-- 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                        +L     +  L
Sbjct: 329 -------------MLFAPRGIWGL 339


>gi|54025331|ref|YP_119573.1| putative ABC transporter ATP-binding protein [Nocardia farcinica
           IFM 10152]
 gi|54016839|dbj|BAD58209.1| putative ABC transporter ATP-binding protein [Nocardia farcinica
           IFM 10152]
          Length = 926

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 51/307 (16%), Positives = 116/307 (37%), Gaps = 18/307 (5%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
           +     +  +  +I+ + A    +V G  G +SL  +    + AY+  +     G+    
Sbjct: 343 TSGSYRAALVSSIIFAVLALSQVVVTGYAGQVSLAQLTLAGVAAYALSVSNQHLGIPFPF 402

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
              V+A+ +   G+++GLP+L+ RG  L + TL ++   +    +   +  G  G  +  
Sbjct: 403 APVVAALFATVVGVVVGLPALRVRGLPLTVVTLALAVFVEAFWFRNPSLNGGVQGAPIDA 462

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
              F               +      +    + L +       + WLRR+++      +R
Sbjct: 463 PRLFGID--------LGIGTGEAYPRLAFGLLCLVVLTAVGLAVAWLRRSSLGTDMLAVR 514

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
            N+++  +    +   KL  FA+ +   G+AG      +   +P+ F     I + ++V 
Sbjct: 515 ANERSAAAAGIDVSRTKLVTFAIGAFLAGLAGGLLGYQQTLATPEPFTVFLGISLFAVVY 574

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           + G+TS++    A  +  G +             L+         ++ +  I L + ++ 
Sbjct: 575 VAGITSITGGILAGVMAPGGIVYL----------LVDRFLHVGDYYSVISGILLVVTVMA 624

Query: 335 RSHSLLR 341
               +  
Sbjct: 625 NPDGIAS 631



 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 79/297 (26%), Gaps = 7/297 (2%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            ++        +Y      L +   S G+++          AY+Y +L     +     +
Sbjct: 6   SFLVLGLGNGAVYAALGLALVMTFKSSGVVNFATGAVALYAAYTYALLRKGELMVPIPGL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA--- 153
           P +  + G  G+   +         L +    +                    + V    
Sbjct: 66  PETIELGGPLGVAPAMAISLVAAAVLGVLCYALVFRPMRTASVIAKAVASIGLMIVIQAV 125

Query: 154 --DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              R      +V  +     F            ++   +  LSA   L  R T    A  
Sbjct: 126 IAQRAGTGLISVPPIFALDMFALGDRTVPADRVWLAASVVALSAVAALGFRFTRFGVATE 185

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
              +++K  +    +      + + +SS   G+ G   A         +      +  ++
Sbjct: 186 AAAESEKGTYLTGLSPDRIAFANWTLSSMVAGLGGILIAPLVAL--NPVAYSLFIVPALA 243

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
             ++G   S+     A  ++  +      +   Y                 L  + +
Sbjct: 244 ATLVGNFGSIWLTVTAGVVIGALQAEATNLQGLYDWWPRAGTAEAISLLLILGFLVV 300


>gi|91978521|ref|YP_571180.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91684977|gb|ABE41279.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 355

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 48/335 (14%), Positives = 109/335 (32%), Gaps = 14/335 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L ++  + +              ++  +I I+        +++G  G +S    + Y IG
Sbjct: 16  LMLIAIIAVLAITPFLFPGAKPLNVAAKICIFAALVASYDLLLGYTGTVSFAHTMFYGIG 75

Query: 78  AYSYVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           +Y+  I          ++   I +   ++    + +GL SL+    + A+ TL ++  F 
Sbjct: 76  SYAVAIALYTMGPSWGAVAAGIVIGLPLAALLALGIGLFSLRVEAIFFAMITLAVASAFL 135

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  +   +T G+ G                 +         V   I  YYV+   C   
Sbjct: 136 VLASQLSWLTGGEDGRSFQLP----ELLRPGTVFIKDLFGVRVNGRILTYYVIFVGCAAM 191

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +L +  +      + +R+N+    +L    +F    A  +++     AG   A    
Sbjct: 192 ILGLLRVVNSPFGRVLQAVRENRFRAEALGYRTVFHLTYANVIAALVAASAGVLNAMWLR 251

Query: 255 RI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
                    FS  + ++ +V++GGM ++        I I        +     N+  +  
Sbjct: 252 YAGPDTSLSFSIMLDILLMVVIGGMGTIYGAIIGATIFILAQNYLQALMGAASNAATEAG 311

Query: 314 CSF------NMRHTTLMVIALFLVILMRSHSLLRL 342
                      R    + +     +      ++  
Sbjct: 312 LPLLPGLLHPDRWLLWLGLLFVASVYFFPTGIVGR 346


>gi|330873760|gb|EGH07909.1| high-affinity branched-chain amino acid ABC transporter permease
           BraD [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 304

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 86/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A G ++V G +G+++      Y I AY   I  +          P 
Sbjct: 9   IVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGLESFPF 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+      F   S FV       ++L+        +   ++ T +    R  + ++K
Sbjct: 129 GVPTLLEGAWRFEIGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL        G+    +  +  F               L L+++ R   
Sbjct: 248 GSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFG-------------LLVLILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|311109601|ref|YP_003982454.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310764290|gb|ADP19739.1| inner-membrane translocator 72 [Achromobacter xylosoxidans A8]
          Length = 355

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 55/350 (15%), Positives = 132/350 (37%), Gaps = 11/350 (3%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           MS+  L  +     L  LA++  + L              ++  +IL++V+      +++
Sbjct: 1   MSVRLLSGDPPRSTLLALALIAIVALLATAPFLFPGPKSLAVAAKILVFVILVASYDLLL 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           G  G++S    + + IGAY   I   R      ++ + +    ++S A  +++GL SL+ 
Sbjct: 61  GYTGIVSFAHTMFFGIGAYGVAIASIRMEPSWTAVLVGLSGGLVVSLAFALLIGLASLRV 120

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           R  + A+ TL ++  FQ ++ +   +T G+ G+                 + F       
Sbjct: 121 RAIFYAMITLAVAAAFQTLVSQLSDLTGGEDGLNFKVPQMLRPAFRPFSEQIFGVTVDG- 179

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
              I  YY++  +C +   ++L +  +      + IR+N     ++    +  +  +  +
Sbjct: 180 --RIITYYLIAAVCVVLFLLLLRIVNSPFGRVLQAIRENPFRAEAIGYRTVLYRSLSNLL 237

Query: 238 SSAFIGMAGAFFAASRDR-ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           ++AF  +AGA +A             F   + ++ ++++GGM ++       ++ +    
Sbjct: 238 AAAFATLAGAMYALWLRYNGPDTSLSFEIMLNILLMLVIGGMGTMYGAVVGASLFVFAQS 297

Query: 297 LCCG----MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   ++                R    + I   + +      +   
Sbjct: 298 YLQDGLHVIHDAVSGVAPLALLFEPDRWLLWLGILFVVSVYYFPTGIAGR 347


>gi|83594744|ref|YP_428496.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
 gi|83577658|gb|ABC24209.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
          Length = 295

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 72/305 (23%), Positives = 122/305 (40%), Gaps = 17/305 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ ++ +  LIY +   GL++  G  GL++   V  +AIGAY+  +L       I L +
Sbjct: 3   SYLLAVTVIALIYSLMTLGLNLQYGFTGLINFGVVGFFAIGAYTSALLVVAGWP-ILLAL 61

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P +   S      + L SL+ R +Y AI  L  +E  + ++     +T G  G+     L
Sbjct: 62  PCAVAASALVSWPVALLSLRLRIEYFAIVMLGFAETIRLVVTSEGWLTGGVQGVTGIPSL 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                               +   +    V LG       +   L  +      R IRD+
Sbjct: 122 A-------------AALGLSMESTLLTALVALGAVIGVVWLSRRLVASPFGRIIRAIRDD 168

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  +L       K++ F + SA  G+AGA +A     ISPD F       +   +ILG
Sbjct: 169 EDAVQALGKAPGRFKVAVFVLGSASAGLAGALYAHYITYISPDQFMSLLTFYIWVAMILG 228

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+  +      TA+LIG++E    +           +         ++ +AL +++  R 
Sbjct: 229 GVGRVGGAVLGTAVLIGLMEGSRFLRDILPGVA---EVEMASIRLGVIGLALMVLMRFRP 285

Query: 337 HSLLR 341
             LL 
Sbjct: 286 EGLLG 290


>gi|148262198|ref|YP_001228904.1| inner-membrane translocator [Geobacter uraniireducens Rf4]
 gi|146395698|gb|ABQ24331.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Geobacter uraniireducens Rf4]
          Length = 325

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 52/308 (16%), Positives = 114/308 (37%), Gaps = 34/308 (11%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             +   +  + +++V  A    ++ G  G L+      + +GAY+  IL  +  L   L 
Sbjct: 25  DTFFLRVITEAIMWVGLAIAFDVIAGYTGYLNFGHGAFFGMGAYAIGILMMQAHLPFALA 84

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +P   +++G   +I G P+L+ +G Y AIAT  +S   Q + +    IT G  G+     
Sbjct: 85  LPAGGVVAGIAALIAGFPTLRLKGPYFAIATWALSRAIQQLALTM-DITGGPDGMR---- 139

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                             ++F+  + F Y +L+ +      +   L         + IR+
Sbjct: 140 -----------------LTAFLNPQFFYYLMLIVVGGTFILLWFLLECAPFGLKLKAIRE 182

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF-KFSENIIVISIVI 274
           ++    +L       K+ +F +S+   G+ G  +A     I P        +   + +V+
Sbjct: 183 DELGAKALGLNPTKLKMQSFILSAIPTGILGGIYAYWITFIDPASTLGDMVSDQAVVMVV 242

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
            GGM +L        ++     +                  + + +  ++   + + ++ 
Sbjct: 243 FGGMGTLLGPVIGALLIFTFKTIFWAYL-----------SDYQLLYLIILGALIAISVVF 291

Query: 335 RSHSLLRL 342
             + L   
Sbjct: 292 MPNGLWGT 299


>gi|221068451|ref|ZP_03544556.1| inner-membrane translocator [Comamonas testosteroni KF-1]
 gi|220713474|gb|EED68842.1| inner-membrane translocator [Comamonas testosteroni KF-1]
          Length = 356

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 57/345 (16%), Positives = 130/345 (37%), Gaps = 11/345 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L ++   L               ++  ++LI+V+      +++G  G++S    + +
Sbjct: 15  ILALMLLAIFLGLAVAPFAFPGVKALNVAAKVLIFVVLVASFDLLLGYTGIVSFAHTMFF 74

Query: 75  AIGAYSYVILG---SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
            IGAY   I          ++ L +  + ++S    + +GL SL+ R  + A+ TL ++ 
Sbjct: 75  GIGAYGVAIASGKLGAGWGALALGLGAALLLSLLLSLAIGLFSLRVRAIFFAMITLAVAA 134

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            FQ +  +    T G+ G+      +   +        F          I  YY+L  + 
Sbjct: 135 AFQTLASQLSDWTGGEDGLTFKMPEWLSPSFEPFENEIFGTLIDG---RIISYYLLFVLA 191

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L   ++L +  +      + IR+N+    ++   ++  + ++  +S+ F  +AGA  A 
Sbjct: 192 LLLVLMLLRIVNSPFGRVLQAIRENEFRAEAIGYRVVIYRTTSSVLSALFACVAGAMLAV 251

Query: 252 SRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYYF 306
                 PD    F   +  + IV++GGM ++      + I +     + +L    +    
Sbjct: 252 WLRYNGPDTTLSFEIMMDCLLIVVIGGMGTIYGAVIGSVIFLVAQSYLQDLLRLGSEATA 311

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +           R    + +   L +      ++     +  L+ 
Sbjct: 312 SLPWLSALLSPDRWLLWLGLLFVLSVYYFPTGVVGRLRAAASLKE 356


>gi|89901363|ref|YP_523834.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89346100|gb|ABD70303.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 317

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 62/327 (18%), Positives = 126/327 (38%), Gaps = 28/327 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++  +   +      A  S  Y+ S+ +  ++    A   +++    G++S      + +
Sbjct: 6   MIIAMLLAVYIAVPLAFGSDNYVMSLVVASMVIGGIALSWALLGNLGGMVSFGHAAFFGV 65

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  IL  ++G+ + + I +   +      +  LP L+ RG Y A+A L  + IF+ +
Sbjct: 66  GAYASAILSMKFGVPVLISILLGG-VGAVIASLAMLPVLRLRGPYFALAILAYAHIFRIL 124

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
             +W  +T G  G+    RL  +     S                  Y V+L +    A+
Sbjct: 125 ATQWTSVTGGSGGLSNIPRLPEIFGYDFSSKTGG-------------YLVILTIVLAFAA 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +  ++R +    A R + +++ A   +       K     VS+   G+ GAF A   + +
Sbjct: 172 VYQYIRGSHYGLALRAMHESEDATRVVGVNSTLLKGLMLLVSAFMCGVVGAFNAHYINFL 231

Query: 257 SPDMFKFSENIIV-ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            PD       + + I   I GG  +++       ++  + +L              F   
Sbjct: 232 EPDYAFSGLWVTIPIVAAIFGGYRTITGPIVGAVVVYLIDQLI-------------FKNI 278

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
               H  ++ + L  +I+     LL L
Sbjct: 279 IPSGHQLVLGVLLVAMIVFSPDGLLPL 305


>gi|78064746|ref|YP_367515.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia sp. 383]
 gi|77965491|gb|ABB06871.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia sp. 383]
          Length = 324

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 49/302 (16%), Positives = 124/302 (41%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS    +  A   Y+        G +  L +    +
Sbjct: 26  FVMKVLTFALFAAAFNLLIGYTGLLSFGHAMFLATAGYATGYSIQTLGFTPELGVLAGTV 85

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+++GL +++ +G Y A+ TL  +++   I ++                      
Sbjct: 86  AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 131

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  ++ +YYV+L +   + + I+ +  +        I++N+    
Sbjct: 132 GLQGVPRGHLFGLLDLSNDVALYYVVLAVVVAACAFIVRVVHSPFGQVLVAIKENEARAI 191

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+   G+AG+         +     ++ + +V+ + ++GGM +L
Sbjct: 192 SLGYDTDRFKLLAFILSAGIAGLAGSLKVLVLGFETLSDAYWTMSGLVVLMTLVGGMGTL 251

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +    +  +  + + + +  S     T +  +     +L     ++
Sbjct: 252 FGPLLGAALIVALEDRLGDIGEWLASTTGVAWFHSLGESATIVTGLIFIACVLAFRRGIV 311

Query: 341 RL 342
             
Sbjct: 312 GE 313


>gi|220924475|ref|YP_002499777.1| urea ABC transporter permease protein UrtC [Methylobacterium
           nodulans ORS 2060]
 gi|219949082|gb|ACL59474.1| urea ABC transporter, permease protein UrtC [Methylobacterium
           nodulans ORS 2060]
          Length = 381

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 52/341 (15%), Positives = 100/341 (29%), Gaps = 41/341 (12%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L+     A     Y  S+  + L Y + A  L +V G  G+LSL     +A+G Y+  + 
Sbjct: 30  LMTAPGSAVHVPTYAVSLMGKYLTYAILALSLDLVWGYCGILSLGHGAFFALGGYAMGMY 89

Query: 85  GSRYG-----------------------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             R                            W         +    ++ GL +  F    
Sbjct: 90  LMRQIGPRGVYGHPVLPDFMVFLNYKELPWYWYGFDSFPFAAAMVLLVPGLLAFVFGWLA 149

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                  +        + +  +       +  D        +        F        +
Sbjct: 150 FRSRVTGVYLSIITQAMTFALM----LAFFRNDMGLGGNNGLTDFKDILGFNVQAQGTRV 205

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            ++ +      L+  +  ++  +A       IRD +     L       K+ AF VS+  
Sbjct: 206 ALFGLSAVALALAYLLARFMTVSAYGKVLIAIRDAESRTRFLGYRTAHFKVLAFTVSAMM 265

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AGA +      I+P  F  + +I  +  V +GG  +L   A    ++     L  G 
Sbjct: 266 AGVAGALYVPQVGIINPSEFTPANSIEAVIWVAVGGRGTLVGAALGGVLVNYAKTLLTG- 324

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                        +       ++     +V L     ++  
Sbjct: 325 -------------AMPDAWLFMLGALFVVVTLFLPRGIVGT 352


>gi|107103958|ref|ZP_01367876.1| hypothetical protein PaerPA_01005030 [Pseudomonas aeruginosa PACS2]
          Length = 529

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 92/295 (31%), Gaps = 31/295 (10%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL----SIWLLIPVSAMISGACGMIMGLP 113
           I  G LG++++       +GAYS  ++   +       + L   ++  ++      +G+ 
Sbjct: 256 ITYGLLGVINMAHGEMLMLGAYSTYVVQLLFQRLAPEWLALYPLLALPVAFCVSAAIGMA 315

Query: 114 SLKFRGDYLAIAT---LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
             +    +L       L+ +     +LI+   +  G   + VA+            +   
Sbjct: 316 LERTVIRHLYGRPLETLLATWGISLVLIQLVRMLFGAQNVEVANPA---------WLSGG 366

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                 ++       ++    F+     L L RT +    R +  N+             
Sbjct: 367 IQVLPNLVLPWNRIVIIGFALFVLLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVPTGRV 426

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
            + AF + S   G+ G   A S+             I    +V+LGG+  L+    A   
Sbjct: 427 DMLAFGLGSGIAGLGGV--ALSQVGNVGPDLGQGYIIDSFLVVVLGGVGQLAGSVLAAFG 484

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           L    ++                         L++  + L I  R   L  L+  
Sbjct: 485 LGVANKILEPQIGAVLGK-------------ILILALIVLFIQKRPQGLFALKGR 526


>gi|88798756|ref|ZP_01114339.1| branched-chain amino acid ABC transporter, permease protein
           [Reinekea sp. MED297]
 gi|88778519|gb|EAR09711.1| branched-chain amino acid ABC transporter, permease protein
           [Reinekea sp. MED297]
          Length = 355

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 45/332 (13%), Positives = 124/332 (37%), Gaps = 11/332 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   ++  L                ++ I+++      +++G  G++S    + + IGA
Sbjct: 18  LLAVIVVSLLLAPFIFDGSRALDTAARLCIFIVLVASYDLLLGYTGVVSFAHTLFFGIGA 77

Query: 79  YSYVILGSRYGLSI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           YS  I             + + V+  +S    + +GL SL+ +  + A+ TL ++ +   
Sbjct: 78  YSVAIAFDHVAPGFGVLLVAVVVALGVSTVVAVTIGLVSLRVKAIFYAMITLAVASVATV 137

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           ++ +    T G+ G+                 +      +    ++  YY++  +  +  
Sbjct: 138 LVSQLYLYTGGEDGMTYRIPRVLTPAFKLLDDKVLGVRING---KLLNYYLIFTVSTVLF 194

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +++ +  +      + +R+N     ++  T ++ + +A  +S+    +AG   A     
Sbjct: 195 LLMVRIVASPFGKVLKALRENDFRAEAIGYTTVYYRTAATVISACMATLAGVLMAIWLRY 254

Query: 256 ISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYYFNSLL 310
             PD     +  I ++ +V++GGM SL        +L+     + E     +  + +  +
Sbjct: 255 TGPDSVLSLNIMIDILLMVVIGGMGSLYGAIIGATLLVLARNYLNEAMGVAHNAFIDVPI 314

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             +     R    + +   +++      ++  
Sbjct: 315 LAELFNPERWLLWLGVLFVVMVYFFPLGIVGR 346


>gi|264677359|ref|YP_003277265.1| inner-membrane translocator [Comamonas testosteroni CNB-2]
 gi|262207871|gb|ACY31969.1| inner-membrane translocator [Comamonas testosteroni CNB-2]
          Length = 356

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 109/309 (35%), Gaps = 7/309 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++                   ++  ++LI+V+      +++G  G++S    + +
Sbjct: 15  VLAVLLLAVFAGLALAPFLFPGVKALNVAAKVLIFVVLVASFDLLLGYTGIVSFAHTMFF 74

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG---LPSLKFRGDYLAIATLIMSE 131
            IGAY   I  +R G     L            ++     L SL+ R  + A+ TL ++ 
Sbjct: 75  GIGAYGVAIASTRLGAGWGALAAGLGGALVVSLLLSLAIGLFSLRVRAIFFAMITLAVAA 134

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            FQ +  +    T G+ G+      +   +        F         +I  YY+L  + 
Sbjct: 135 AFQTLASQLSDWTGGEDGLTFKMPEWLSPSFEPFENDIFGVTIDG---KILSYYLLFAVA 191

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                ++L +  +      + IR+N+    ++   ++  + ++  +S+ F  +AGA  A 
Sbjct: 192 VALVLMLLRIVNSPFGRVLQAIRENEFRAEAIGYRVVVYRTTSSVLSALFACVAGAMLAV 251

Query: 252 SRDR-ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                       F   +  + IV++GGM ++        + +        +      +  
Sbjct: 252 WLRYNGPDTSLSFEIMMDCLLIVVIGGMGTIYGAVIGAVVFLIAQSYLQDLLRMASEASA 311

Query: 311 KFDCSFNMR 319
                  + 
Sbjct: 312 GLPWLAALL 320


>gi|153815309|ref|ZP_01967977.1| hypothetical protein RUMTOR_01543 [Ruminococcus torques ATCC 27756]
 gi|317501667|ref|ZP_07959858.1| high-affinity branched-chain amino acid ABC transporter
           [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088450|ref|ZP_08337365.1| hypothetical protein HMPREF1025_00948 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847371|gb|EDK24289.1| hypothetical protein RUMTOR_01543 [Ruminococcus torques ATCC 27756]
 gi|316896918|gb|EFV18998.1| high-affinity branched-chain amino acid ABC transporter
           [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330408217|gb|EGG87705.1| hypothetical protein HMPREF1025_00948 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 294

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 106/308 (34%), Gaps = 24/308 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      +Y + A G ++V G   +L+        IGAY  +I   + G+S  L I
Sbjct: 5   SYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGAYMALITMMKAGMSPILAI 64

Query: 97  PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
             + ++    G+++   +    R    ++A LI +     +L     +  G         
Sbjct: 65  VAAVIVCTVLGILIERIAYKPLRNASSSLAVLITAIGVSYLLQNTALLVFGANAQTFPSV 124

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           + + G ++             +         +     +   ++L+++++    A R + +
Sbjct: 125 IKWKGLSLAG---------GKLNISGETIVTIAACVVIMIVLMLFVQKSKPGQAMRAVSE 175

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A   +   +       FA+ SA   +AG    ++   ++P        I      + 
Sbjct: 176 DKGAAQLMGINVNGTIALTFAIGSALAAVAGVLLCSAYPSLTPYT-GAMPGIKAFVAAVF 234

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S+        +L  +                            ++   L +V+L++
Sbjct: 235 GGIGSIPGAFIGGILLGVIEIFGKAYISSQMADA-------------IVFAVLIIVLLVK 281

Query: 336 SHSLLRLR 343
              LL  +
Sbjct: 282 PTGLLGKK 289


>gi|116253648|ref|YP_769486.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115258296|emb|CAK09398.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 334

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 56/313 (17%), Positives = 118/313 (37%), Gaps = 27/313 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            ++  +++   +    L +V G  G+ +L     +  GAY+  IL + YG++  LL+ ++
Sbjct: 44  LALLTRMITIALLVLSLDLVTGYCGVATLGHAALFGSGAYAAGILSAHYGINDPLLMMLA 103

Query: 100 AMISGACG-MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            ++ GA   ++ G   L+  G    + ++ +  +F     K    T G  G+        
Sbjct: 104 GIVGGAVAGLLCGAIILRAHGLPQLVLSIALIHLFHEFANKASSWTGGSDGLSGIAPDPV 163

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G               F +Y    ++  + +  +   ++  L R+      R I+ +  
Sbjct: 164 FGL------------FEFDLYGHTAFFFGMALLLIVFVLLRVLVRSPFGMLCRAIKQDPL 211

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              ++  +   A +  +A+S A  G+ GA  A S   +  D   F+++   + +++LGG 
Sbjct: 212 RIRAMGASPKAALIRMYAISGAVAGVGGALNAISTQVVGLDSLSFTQSAEALVMLVLGGT 271

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL      T I +   +     N +++               T++   L  V+L     
Sbjct: 272 GSLFGALSGTVIFMLFEDYVSAANPFHW--------------LTMVGALLIAVVLFAPKG 317

Query: 339 LLRLRTPSNFLER 351
           L           R
Sbjct: 318 LYGTAAAFVGRRR 330


>gi|167586400|ref|ZP_02378788.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia ubonensis Bu]
          Length = 394

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 52/352 (14%), Positives = 106/352 (30%), Gaps = 32/352 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 51  VAIGVGVPLAALVAPESSAFHLSAYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 110

Query: 74  YAIGAYSYVILGSRYG----------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           +A+G Y+  +   R                + +    +     G      +L       A
Sbjct: 111 FALGGYAIGMYLMREIGRDGKYGSDLPDFMVFLDWHQLPWYWSGTQHLAVALLLVVLVPA 170

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT--------VRSLIRFFRFPSS 175
           +   +         +K   ++     +  A  L F                 R   FP +
Sbjct: 171 VLAWVFGFFTFRSRVKGVYLSIITQALTFAAMLLFYRNETGFGGNNGFTDFKRIAGFPVT 230

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  ++ +      L+      +  + +      +RD +     L  + +  KL  +
Sbjct: 231 SPGTRTVLFLLTFAALVLAFVAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 290

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+   G+AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 291 TVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 350

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                               F       + +   LV L+    ++ L   + 
Sbjct: 351 SFFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGLVEAAI 388


>gi|325526279|gb|EGD03892.1| inner-membrane translocator [Burkholderia sp. TJI49]
          Length = 433

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 77/291 (26%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +              +++              
Sbjct: 159 ITYGLIGVINMAHGEFLMIGAYATYVVQTLIQRYAPAAFDWYPLVAVPVSFAAAALVGIV 218

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +           +      +     S +         +
Sbjct: 219 LER--LVLRHLYGRPLETLLATFGVSLILIQATRMLFGAQNVQVANPSWMSGGVAVMQNL 276

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 277 ILPYNRLAILAFALAVVFVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAF 336

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          +  I     V+LGG+  ++        L  V + 
Sbjct: 337 GAGIAGLGGC--ALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 394

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     ++  + L I  R   +  L+  S  
Sbjct: 395 IEPFWGAVLAK-------------IAVLAMIVLFIQKRPQGMFALKGRSAE 432


>gi|222102530|ref|YP_002539569.1| ABC transporter membrane spanning protein (branched chain amino
           acid) [Agrobacterium vitis S4]
 gi|221739131|gb|ACM39864.1| ABC transporter membrane spanning protein (branched chain amino
           acid) [Agrobacterium vitis S4]
          Length = 350

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 75/326 (23%), Positives = 130/326 (39%), Gaps = 18/326 (5%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYG 89
               S+ +I+++ +  LI  +   GL+++ G  G LSL       +GAY ++        
Sbjct: 34  PFLTSEYWINAIIVPFLILSLAGLGLNLLTGYAGQLSLGAGAFMMVGAYATFAFQLRVPE 93

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L + L + +S +ISG  G+  GLPS + +G YL ++TL     F+ + +K+    NG + 
Sbjct: 94  LPLPLALIISGLISGVVGLAFGLPSTRIKGFYLIVSTLTAQFFFEWLFLKFPWFYNGNSS 153

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             +A                       +      Y++ LG   L   +   L R+     
Sbjct: 154 ATIALP------------HGLSVFGLDLNNPHGRYFLTLGSVALLTWLSFNLVRSQTGRN 201

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRISPDMFKFSENII 268
           W  IRD   A   +      AKL AFAVSS  +G+AGA +A       S   F  + +  
Sbjct: 202 WMAIRDMDTAAAVIGVPTFRAKLQAFAVSSFILGIAGALWAFTYLGSASVQSFGLTRSYQ 261

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           ++ I+I+GG+ ++       A +  +      +  Y F+  +            +  I +
Sbjct: 262 ILFIIIIGGLGTIRGAYLGAAFVSLLPLALDWLFQYLFSGHVDAGL-LQNIQKAIFGILI 320

Query: 329 FLVILMRSHS---LLRLRTPSNFLER 351
              ++        LL LR       R
Sbjct: 321 IWFLIKEPEGLSRLLGLRRAHGARRR 346


>gi|152980464|ref|YP_001352469.1| branched-chain amino acid transport system permease protein
           [Janthinobacterium sp. Marseille]
 gi|151280541|gb|ABR88951.1| branched-chain amino acid transport system permease protein
           [Janthinobacterium sp. Marseille]
          Length = 290

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 103/306 (33%), Gaps = 26/306 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +    Y +   GL+++ G + +++      YA+GAY    + + +G++ +  + V+
Sbjct: 9   LNALVLGSTYALLGIGLTLIFGIMRVVNFAHGELYALGAYVAYGVVAMFGMNFFGSLIVA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           A++    G  +    L+ R        +++      I+   + +  G     V       
Sbjct: 69  AIVGFLFGTAIEYFLLRRRDLKAIDEVMLIMIGVMIIMQNAELLMWGGVAKSVPSPFSQE 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                            +       +VL+    L     L + R+ +  A R    ++ A
Sbjct: 129 PIVW-----------GAISVSPIRLFVLVTALALLVIFYLLIERSRLGLAMRATFQDKDA 177

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +       FA+ S    +AGA  A     +         ++   +IVILGG+ 
Sbjct: 178 AKIVGVNVSHVYTLTFALGSCLASVAGALLAPV--FVVTPTMGDLASLKAFAIVILGGLG 235

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           +L   A    IL  V E   G                      L  + +  V++ R   L
Sbjct: 236 NLPGAALGGFILAIVEEFGAGYIS-------------TAYRDALGFLVILAVMIFRPQGL 282

Query: 340 LRLRTP 345
             +R  
Sbjct: 283 FTIRER 288


>gi|270260923|ref|ZP_06189196.1| transporter [Serratia odorifera 4Rx13]
 gi|270044407|gb|EFA17498.1| transporter [Serratia odorifera 4Rx13]
          Length = 526

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 86/288 (29%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++   +       + +  +++      +       
Sbjct: 253 ITYGLLGVINMAHGEMLMLGAYSAYLVQGLFQQFAPQWLALYPLVALPVAFAITACIGMA 312

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W        G+ V      L     + +         +
Sbjct: 313 LER--TVIRHLYGRPLETLLATWGISLVLIQGVRVLFGAQNLEVANPAWLSGGIQLLPNL 370

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V++ +  + A   L L +T +    R +  N+              + AF +
Sbjct: 371 VLPWNRIAVIVFVVLVLALTWLLLNKTRLGMNVRAVTQNRAMAACCGVPTGRVDMLAFGL 430

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+             I    +V+LGG+  L+    A   L  V ++
Sbjct: 431 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFGLGIVNKI 488

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                    L++  + L I  R   L   +  
Sbjct: 489 LEPQIGAVLGK-------------ILILALIVLFIQKRPQGLFAFKGR 523


>gi|323692014|ref|ZP_08106262.1| high-affinity branched-chain amino acid ABC transporter
           [Clostridium symbiosum WAL-14673]
 gi|323503937|gb|EGB19751.1| high-affinity branched-chain amino acid ABC transporter
           [Clostridium symbiosum WAL-14673]
          Length = 293

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 99/307 (32%), Gaps = 23/307 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      +Y + A G ++V G   +L+        +G ++   + S  G S  + +
Sbjct: 5   SYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDIIMVGGFTVFTIVSTAGGSPVVGV 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             S ++    G+ +   + +       +A LI +     +L     +  G         +
Sbjct: 65  LASIVVCTVLGVTIEKVAYRPLRGASPLAVLITAIGVSYLLQNVALLIFGSNARQFTSVV 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +             +         ++    +  ++  ++ +T I  A   + ++
Sbjct: 125 TLPALKLAG---------GKLSISGVTIVTIITCVIIMLALTTFINKTKIGQAMLAVSED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ S+   +AG    ++   ++P        I      + G
Sbjct: 176 KGAATLMGINVNGTIAVTFAIGSSLAAIAGVLLCSAYPSLTPYT-GSMPGIKAFVAAVFG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        +L  +  L            + F               L +V+L+R 
Sbjct: 235 GIGSIPGAMIGGILLGVIENLAKAYISSQLADAIVFS-------------VLIIVLLVRP 281

Query: 337 HSLLRLR 343
             +L  +
Sbjct: 282 TGILGKK 288


>gi|206970890|ref|ZP_03231842.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus AH1134]
 gi|206734526|gb|EDZ51696.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus AH1134]
          Length = 298

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 58/304 (19%), Positives = 121/304 (39%), Gaps = 31/304 (10%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPV 98
           M  QI I+ +FA    +++G  G++S    + + IGAY   +L  R      +  + I  
Sbjct: 1   MFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFLIGIVA 60

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +IS     I+GL SL+ +  + A+ TL +S++F  +  KW+ +T+G  G        F
Sbjct: 61  AIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPEIF 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                    YYV L        ++    +++I    + I  N++
Sbjct: 121 RDRF-------------------TFYYVSLVCLCFIFILLRLFTKSSIGKVLKAISQNEQ 161

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   ++  K+ A  V+     ++G  F  +   ++  +F     +  + + ++GG+
Sbjct: 162 RVEALGYKVLHYKIIASVVAGIVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGV 221

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L      + I+  +      +   Y             R T ++ +   +V+L+    
Sbjct: 222 GTLIGAIAGSGIIESLKYYLSELATEY---------PIFERWTIILGLLYIIVLLVFPKG 272

Query: 339 LLRL 342
           L+  
Sbjct: 273 LVGT 276


>gi|257483302|ref|ZP_05637343.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 334

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
           + +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 18  SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMREAAG 77

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      + L  L      L           + +     
Sbjct: 78  DGLPAFMTFLSWTELPWYWAGTDNFLWALCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 137

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  S       ++   + +   S  I 
Sbjct: 138 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRATLFLATVLLLIASLYIG 197

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 198 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 257

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 258 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 303

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     +V L     ++ L
Sbjct: 304 YWLFFLGALFIIVTLYLPKGVIGL 327


>gi|29831861|ref|NP_826495.1| D-ribose ABC transporter permease protein [Streptomyces avermitilis
           MA-4680]
 gi|29608978|dbj|BAC73030.1| putative D-ribose ABC transporter substrate-binding
           protein/permease protein [Streptomyces avermitilis
           MA-4680]
          Length = 648

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 98/313 (31%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +V  + +    G   +   + ++G+Q  +  + A+G++ V+ S G + L+     
Sbjct: 27  ALTALIVLVVAMSALSGDFLTTDNLLNIGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVA 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A       + +GL + + + ++     ACG++ G      +                
Sbjct: 86  ALSATVLAWTATSHGLPVVVAVALAVATGVACGLVNGFLISYGKLPPFIAT-------LA 138

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +          G  +                             ++   +L M  + 
Sbjct: 139 MLSVGRGLSLVISQGSPIPFPDSVSHL--------------GDTLGGWLPVPVLVMIVMG 184

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L RT I  +   I  N++A       +   KL+ +A+S  F   AG   A+   
Sbjct: 185 LITALILGRTYIGRSMYAIGGNEEAARLSGLRVKKQKLAIYALSGLFAAAAGIVLASRLS 244

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P   +  E   + ++VI      GG    S       IL  +      ++   F   
Sbjct: 245 SAQPQAAQGYELDAIAAVVIGGASLAGGTGKASGTLIGALILAVLRNGLNLLSVSAFWQQ 304

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 305 VVIGVVIALAVLL 317


>gi|327398298|ref|YP_004339167.1| ABC transporter integral membrane subunit [Hippea maritima DSM
           10411]
 gi|327180927|gb|AEA33108.1| ABC-type transporter, integral membrane subunit [Hippea maritima
           DSM 10411]
          Length = 347

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 60/322 (18%), Positives = 114/322 (35%), Gaps = 7/322 (2%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
             F++        Y   +     I++M A   +++ G  G  SL      AIGAY   IL
Sbjct: 18  FTFVWYANNNLTPYAVRIWENTAIFLMLAASYNLINGVTGQFSLEPNGFVAIGAYVAAIL 77

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                      + +   +      I            L  A +     F    ++   + 
Sbjct: 78  TLTPDQKD--AMFIIEPMVPWLKNIHMSFLPSLIIAGLVTAFVGFLLGFPVFRVRGDYLA 135

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
               G      L     +  ++           I      +   G   LS  II+ +  +
Sbjct: 136 IVTLGF----GLTIRVISNNTITITNGALGLKGIASYTNIWWCFGWAILSMIIIMRIVYS 191

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
           A   A + IRD++ A  ++     + K++AF +++ F G+ G   A     ISP MF F 
Sbjct: 192 AFGRAMKAIRDDEDAAIAMGINTFWIKMAAFVIAAFFEGVGGGLLAHLITTISPTMFTFF 251

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
               ++ I+++GG+ S++    AT ++I   E+   +      + L            + 
Sbjct: 252 LTFQLLIIIVVGGLGSMTGTVMATILVIWGSEILRFVEQPMNIAGLHIP-GIPGMRMVIF 310

Query: 325 VIALFLVILMRSHSLLRLRTPS 346
            I L ++++     ++  R  S
Sbjct: 311 SILLIVIMIFAREGIMGQREFS 332


>gi|319783757|ref|YP_004143233.1| urea ABC transporter permease protein UrtC [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317169645|gb|ADV13183.1| urea ABC transporter, permease protein UrtC [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 410

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 109/357 (30%), Gaps = 35/357 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGA--TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
           R+     IL  +AV+ PLL      A       YI ++  + L Y + A  L +V G  G
Sbjct: 14  RIAITIFILLAVAVIVPLLNLAVSPASAFYVPSYIVALTGKYLCYALLALALDLVWGYCG 73

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           +LSL     +A+G Y+  +   R   S  +                 LP   +  D+   
Sbjct: 74  ILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGNPILPDFMVFLNYKELPWFWYGFDHFWF 133

Query: 125 ATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRS 165
           A L++  +   +   +                             +  D  +     +  
Sbjct: 134 AGLMVLAVPGLLAFVFGWFAFRSRVTGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTD 193

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                 F          ++     M  L+  +   +  +        +RD +     L  
Sbjct: 194 FKDILGFNVQADATRSALFAASAVMLALAVFVTWAIVGSKYGKLLMAVRDAESRTRFLGW 253

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                KL AF VS+   G+AGA +      I+P  F+ S +I V+    +GG  ++    
Sbjct: 254 RAENVKLFAFTVSAVMAGIAGALYVPQVGIINPGEFEPSNSIEVVVWAAVGGRGTIVGPI 313

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               ++        G+                      +      V L+    ++ +
Sbjct: 314 IGALLVNAGKSWFTGV--------------LPEFWLFALGGLFVAVTLLLPKGIIGM 356


>gi|146305734|ref|YP_001186199.1| inner-membrane translocator [Pseudomonas mendocina ymp]
 gi|145573935|gb|ABP83467.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Pseudomonas mendocina ymp]
          Length = 363

 Score = 86.1 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 51/320 (15%), Positives = 98/320 (30%), Gaps = 27/320 (8%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------- 86
             Y  ++  +IL Y + A  L +V G  G+LSL   + +A+G Y+  +            
Sbjct: 51  SAYALTLVGKILCYAIVALALDLVWGYAGMLSLGHGLFFALGGYAMGMYLMRQSAGDGLP 110

Query: 87  -RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF---QNILIKWKP 142
                  W  +P     + +    + L  L      LA                ++    
Sbjct: 111 AFMSFLAWSELPWYWYGTSSFLWALCLVVLAPGLLALAFGFFAFRSRIKGVYFSIMTQAL 170

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
              G    +  +  +          R   F  +       +++  + +   S  +   L 
Sbjct: 171 TFAGMLLFFRNETGFGGNNGFTGFTRILGFDITAQGTRAALFFATVVLLVGSLYLGFRLA 230

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+        +RD +             KL  + +S+   G+AGA +      I+P    
Sbjct: 231 RSKFGRVLTALRDAENRLMFCGYDPRGYKLFIWVLSAVLCGLAGALYVPQVGIINPSEMA 290

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            +++I     V LGG  +L        I+ G+                 F  +F      
Sbjct: 291 PTQSIEAAVWVALGGRGTLIGPLLGAGIVNGMKSW--------------FTVAFPEYWLF 336

Query: 323 LMVIALFLVILMRSHSLLRL 342
            +     +V L     ++ L
Sbjct: 337 ALGALFIVVTLFLPKGVIGL 356


>gi|324325995|gb|ADY21255.1| branched chain amino acid ABC transporter permease [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 333

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 58/325 (17%), Positives = 126/325 (38%), Gaps = 31/325 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 15  VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74

Query: 81  YVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +          +  + I  + +IS     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 75  VALLFDWQGVSVTNFLIGIIAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YYV L    +   +
Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L  +    
Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
            R T ++ +   +V+L+    L+  
Sbjct: 287 ERWTIILGVLYIIVLLVFPKGLVGT 311


>gi|295102251|emb|CBK99796.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           (TC 3.A.1.4.-) [Faecalibacterium prausnitzii L2-6]
          Length = 292

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 95/305 (31%), Gaps = 25/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G S+V G + LL+        +GAY    + ++ GL     +  
Sbjct: 8   LINGLSLGSIYALIALGYSMVYGIILLLNFAHGDVIMVGAYMSWFVMNQLGLGPVTAVCA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+++   +         I+ LI +      L     +  G            
Sbjct: 68  TILTCTLLGVVIEKIAYTPLRSAPRISLLITAIGVSFFLEYTAELVMGS----------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + S      F        +     L+        +   +++T +  A R + ++  
Sbjct: 117 GAKVIPSYYDNKTFYLGKAPLGLTSIITLVVTVLSMLVLTFLVQKTKLGKAMRAVSEDMD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FAV SA  G+    +  S  + +P M      +      +LGG+
Sbjct: 177 AARLMGINVNSTISFTFAVGSALAGIGSVLYCCSYPQATPTM-GSMLGLKAFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++         +    +   + F               L +V+L +   
Sbjct: 236 GSIPGAMVGGIVIGLCECFVSAIGLSAWKDAVTF-------------AILIIVLLFKPTG 282

Query: 339 LLRLR 343
            L  +
Sbjct: 283 FLGRK 287


>gi|119896967|ref|YP_932180.1| ABC transporter membrane protein [Azoarcus sp. BH72]
 gi|119669380|emb|CAL93293.1| probable ABC transporter, membrane spanning protein [Azoarcus sp.
           BH72]
          Length = 397

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 46/356 (12%), Positives = 99/356 (27%), Gaps = 32/356 (8%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            ++  + V    L      A     Y  S+  +IL Y++ A  + ++ G  G+LSL   +
Sbjct: 25  AVVACVGVPVAHLALPEGHALHLSAYTVSLLGKILCYMVVAVAMDLIWGYAGILSLGHGL 84

Query: 73  AYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
            +A+G Y++ +                        W  +P     S +    + L     
Sbjct: 85  FFALGGYAFGMYLMRQIGRDGSYQSDLPDFMVFLDWKELPWYWAGSDSFLWALFLAMALP 144

Query: 118 RGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
                                 +I            +  +  +          R   +  
Sbjct: 145 GLVAFVFGYFAFRSRIKGVYFSIITQALTYAAMLLFFRNETGFGGNNGFTDFKRILGYSI 204

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
           +       ++ +   +      +  +L  +        IRD +     +    +  KL  
Sbjct: 205 TSPEMRATLFALSALLLIACLVLGRYLVSSRFGRVLAAIRDAESRVMFIGYNPLHYKLFM 264

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           + +S+   G+AGA +      I+P     + +I +   V +GG  +L        I+   
Sbjct: 265 WTLSAVLCGLAGALYVPQVGIINPSEMSPANSIEIAVWVAVGGRGTLVGAVLGAGIVNLA 324

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                            F  +        +      V L     ++ L       +
Sbjct: 325 KSF--------------FTVTVPEYWPFFLGFLFIAVTLYLPDGVVGLWRKLRARK 366


>gi|238025740|ref|YP_002909971.1| putative branched-chain amino acid ABC transporter integral
           membrane subunit [Burkholderia glumae BGR1]
 gi|237874934|gb|ACR27267.1| Putative branched-chain amino acid ABC transporter integral
           membrane subunit [Burkholderia glumae BGR1]
          Length = 326

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 57/323 (17%), Positives = 128/323 (39%), Gaps = 15/323 (4%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V   +L   L             ++++ + +FA   ++++G  GLLS    +  A   Y 
Sbjct: 6   VLYGVLLAGLAVLPFAGVYPLFVMKVMCFALFAAAFNLLIGYTGLLSFGHAMFLATAGYL 65

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                   GLS  L +      + A G+++GL +++ +G Y A+ TL  +++   + ++ 
Sbjct: 66  TGYAIQTLGLSPELGVLAGTAAATALGLVVGLFAIRRQGIYFAMITLAFAQMVYFVYLQA 125

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
                                 ++ + R   F    +  ++ +YYV+L    L+A  I+ 
Sbjct: 126 --------------PFTHGEDGLQGVPRGRLFGLLDLSSDLTLYYVILVAVVLAALSIVR 171

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +  +        I++N+    SL       KL AF +S+A  G+AG+         +   
Sbjct: 172 IVHSPFGQVLVAIKENEPRAISLGYDTDRFKLLAFVLSAALAGLAGSLKVLVLGFETLGD 231

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMR 319
             ++ + +VI + ++GGM +L       A+++ + E    +  +    + + +  S    
Sbjct: 232 AYWTMSGLVILMTLVGGMGTLFGPLLGAALIVLLEERLGDIGTWLASATGVDWFRSLGES 291

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
            + +  +     +L     ++  
Sbjct: 292 TSIVTGLIFIACVLTFRRGIVGE 314


>gi|295678150|ref|YP_003606674.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295437993|gb|ADG17163.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 324

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 48/302 (15%), Positives = 122/302 (40%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS    +  A   Y         G S  L +     
Sbjct: 27  FVMKVLCFALFAAAFNLLIGYTGLLSFGHAMFLASAGYVTGYAMQTLGFSPELGVLSGTA 86

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+++G  +++ +G Y A+ TL ++++   + ++                      
Sbjct: 87  AATLLGLVVGFFAIRRQGIYFAMVTLALAQMVYFVFLQA--------------PFTHGED 132

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  ++ +Y+V+L +   +  +I+ +  +        I++N+    
Sbjct: 133 GLQGVPRGNLFGLLSLSSDVALYFVVLAVIVAAFLLIVRIVHSPFGQVLVAIKENEPRAV 192

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+   G+AG+     +   +     ++ + +VI + ++GGM +L
Sbjct: 193 SLGYDTDRFKLLAFILSAGIAGLAGSLKVLVQGFETLSDAYWTMSGLVILMTLVGGMGTL 252

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +    +     + + + +  S     T +  +     +L     ++
Sbjct: 253 FGPLLGAALIVSLEDRLGDIGAALASMTGIDWFRSLGESVTIVTGLIFIACVLAFRRGIV 312

Query: 341 RL 342
             
Sbjct: 313 GE 314


>gi|27379152|ref|NP_770681.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27352302|dbj|BAC49306.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 322

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 106/287 (36%), Gaps = 15/287 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V+ ++  L      +  Y   +  Q L + + A   ++++G  GLLS    +      
Sbjct: 20  MIVFAVMALLLASVPFTGVYPFFVM-QALCFALLACAFNLLIGYGGLLSFGHAMFLGTAG 78

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y        + L   L I V    +    ++ G  S++ +G Y ++ TL +S++   I +
Sbjct: 79  YCSAHALKVWALPPELGILVGVAGAFVLSIVTGYISIRRQGIYFSMITLALSQLLYFIYL 138

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +                       ++ + +   F    +     +YYV+L        +I
Sbjct: 139 QA--------------PFTHGEDGIQGIPQGHMFGVLDLSKPTVLYYVVLVGFLAGFLLI 184

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +  +      ++IR+N++   SL       K  AF +S    G AG+         S 
Sbjct: 185 FRIINSPFGEVLKSIRENEQRAISLGYRTDQYKFLAFVLSGTLAGFAGSLKVFVAQNASL 244

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
               +S +  V+ + ++GG+ ++        ++I + +       + 
Sbjct: 245 TDVHWSMSGEVVLMTLVGGLGTIFGPVVGAFVIIAMQQYLASFGQWV 291


>gi|288958251|ref|YP_003448592.1| ABC branched-chain amino acid transporter inner membrane subunit
           [Azospirillum sp. B510]
 gi|288910559|dbj|BAI72048.1| ABC branched-chain amino acid transporter inner membrane subunit
           [Azospirillum sp. B510]
          Length = 340

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 54/301 (17%), Positives = 116/301 (38%), Gaps = 29/301 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS      +   AY        +G+   L I +   
Sbjct: 59  FLMKVLCFALFACAFNLLIGFGGLLSFGHAAFFGSAAYVTAHTVKMWGVPPELGILLGTA 118

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            S   G++ G  +++ +G Y A+ TL +S++   + ++                      
Sbjct: 119 ASAFLGLLFGGIAIRRQGIYFAMITLALSQMVYFLALQL--------------PFTHGED 164

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++++ R   F    +   + MYY +LG+  +  +II    ++      + IR+N+    
Sbjct: 165 GIQAVPRGVLFGVFDLNNPLAMYYTVLGIFLIGFAIIWRTVQSPFGQVLKAIRENEPRAI 224

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S++  G+AG   A      +     +  +  V+ + +LGGM +L
Sbjct: 225 SLGYRTDRYKLLAFILSASLAGLAGGTKAIVFQLATLTDVTWQMSGEVVLMTLLGGMGTL 284

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           S      A+++ +       +                    ++       +L+    +  
Sbjct: 285 SGPVIGAALVVTLENYLAATSLPVP---------------VVIGCIFVACVLVFRRGIAG 329

Query: 342 L 342
            
Sbjct: 330 E 330


>gi|116694750|ref|YP_728961.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
 gi|113529249|emb|CAJ95596.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
          Length = 348

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 54/302 (17%), Positives = 119/302 (39%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           + +++L + +FA   ++++G  GL+S      +   AY+         L+  L +     
Sbjct: 30  LVMKLLCFALFACAFNLLLGYTGLVSFGHAAFFGGAAYACGYAMKFLQLTPELGLLAGTA 89

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
                G++ G  +++ +G Y A+ TL ++++F    ++    T G+ G+    R      
Sbjct: 90  FGALLGLVFGALAIRRQGIYFAMITLALAQMFYFFCLQAPA-TGGEDGLQAVPR------ 142

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F    +  +  MYYV+L +   +   I+ +  +      R I++N+    
Sbjct: 143 -------GDLFGVLPLASDHTMYYVVLLITAAAFLGIMRIVNSPFGQILRAIKENEPRAI 195

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +SSA  G+AGA         +     +  +  VI + ++GGM +L
Sbjct: 196 SLGYDADRFKLLAFVLSSALAGLAGALKTLVLGFATLTDVHWMMSGTVILMTLVGGMGTL 255

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           S       +++ +              + + +  +     + +  +   + +L     ++
Sbjct: 256 SGPLVGALVIVALENKLGDAGNALAAMTGIGWFETLGESVSMVTGLIFVVCVLTFRRGIM 315

Query: 341 RL 342
             
Sbjct: 316 GE 317


>gi|149202323|ref|ZP_01879296.1| ABC transporter, membrane spanning protein [Roseovarius sp. TM1035]
 gi|149144421|gb|EDM32452.1| ABC transporter, membrane spanning protein [Roseovarius sp. TM1035]
          Length = 368

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 47/346 (13%), Positives = 100/346 (28%), Gaps = 28/346 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           ++K L  L  +  L +   +    +  ++ +      +Y M A  +S+  GS G+L++  
Sbjct: 7   HNKTLQWLFYIAVLAVLGAVPLISNDAFLLNQLAIYGVYGMLAVSISLCWGSGGILNMGQ 66

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
            IA+ +GAY   +       +   + P           ++  P             +   
Sbjct: 67  GIAFGLGAYCMAMTMQMQTQADGTIPPFMLNNGLDSLPLLWQPFQNTSTGIFLALFVPTV 126

Query: 131 EIFQNILIKWKPITNGKAGIYVA--------------DRLYFLGTTVRSLIRFFRFPSSF 176
                  I +    +G     +                        +          +  
Sbjct: 127 FYLIFGGIMFTARVSGPFFAIMTLATLSAFATIFVDLQPYTNGVNGISPPSSLKLGQTEI 186

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
             Y    Y+ +  +          + ++      R ++D+ +    L   +   +   + 
Sbjct: 187 DPYSSGAYWFVFALLAACTVAAKLINQSRFGLIVRALKDDPERVRFLGYNVAIYETLVYT 246

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           +S     +AG  FA     +SP  F+   +I ++  V LGG  SL         + G   
Sbjct: 247 LSGLIAAIAGCCFAVLTQYVSPAQFEVGFSISIVIWVALGGRNSLIWAMFGAFTVQGAQS 306

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                              F      ++  +  LV+      L  L
Sbjct: 307 YV--------------GDQFLSTWILILGFSFILVVRFLPGGLAGL 338


>gi|320330448|gb|EFW86427.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330873928|gb|EGH08077.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 359

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
           + +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      + L  L      L           + +     
Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWALCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  S       ++   + +   S  I 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRATLFLATVLLLIASLYIG 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     +V L     ++ L
Sbjct: 329 YWLFFLGALFIIVTLHLPKGVIGL 352


>gi|303246981|ref|ZP_07333257.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
 gi|302491688|gb|EFL51571.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
          Length = 338

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 112/339 (33%), Gaps = 19/339 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L  V   +L           Y  S+ + + + ++ +  L+I+ G++G  S       
Sbjct: 6   VPALLAVLFAVLVWVSQTGTLNIYWQSVIMFMGVNIILSSSLNIINGNMGEFSCGHAGFM 65

Query: 75  AIGAYSYVILGSRYGLS---IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           A+GAY   +L              +   ++      +I+ +  L      L +A      
Sbjct: 66  AVGAYVSSVLSVALFAKSAAFGQPLLPPSLAVWFFPVILLIGGLAASVVGLLVAIPSFKT 125

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
               + I                 +         +       ++       M +V +G  
Sbjct: 126 RGDYLAIITIAAAYIVKSTIENINIIGGARGFMGMGSVMNAMTNTANLPWMMIWVFVGTV 185

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           F    +I     +        I  ++ A   ++      KL AF VS    G+AG  FA 
Sbjct: 186 FS-VWLIRRFIYSTFGKGVDAISQDEIAAEIMSVDTNHIKLVAFMVSCGLAGVAGGLFAH 244

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               ++P  F   ++  ++ +V LGGM SL+    +  ++  ++E    +    + ++  
Sbjct: 245 ILGYVNPGSFTILKSTEIMVMVYLGGMGSLTGSVLSAILVTLLMEALRPLQIIKWVAIP- 303

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                         + L L++  R   ++  R  ++   
Sbjct: 304 --------------LLLVLLMQFRPEGIMGRRELADVFP 328


>gi|154496292|ref|ZP_02034988.1| hypothetical protein BACCAP_00579 [Bacteroides capillosus ATCC
           29799]
 gi|150274375|gb|EDN01452.1| hypothetical protein BACCAP_00579 [Bacteroides capillosus ATCC
           29799]
          Length = 305

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 99/309 (32%), Gaps = 22/309 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           + + +      +Y + A G ++V G   +L+        +GAY      S +  S     
Sbjct: 8   QNLINGVGLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMVGAYVCFFTVSAFTDSPIAGG 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAI----ATLIMSEIFQNILIKWKPITNGKAGIYV 152
            +  +++     ++G+   +     L      A LI +      L     +  G      
Sbjct: 68  LLGILLAVVVCTVLGVVIERLAYKPLRQAASLAVLITAIGVSYFLQNAALLLWGSDTKVF 127

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
              L  + + +           +     IF   V + +      + L+  R+ +  A R 
Sbjct: 128 PSFLSQMLSKLPGGGSVTVLGCTVAYTTIFNMLVCVII---MVGLTLFTSRSKMGKAMRA 184

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
             +N+ A   +   +       FA+ SA   +AG    ++   ++P        I   + 
Sbjct: 185 CSENKDAARLMGINVDTTISITFAIGSALAAIAGVLLCSTYPTLTPTT-GSMPGIRAFTA 243

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            + GG+ S+        +L  +       +                    ++   L +V+
Sbjct: 244 AVFGGIGSIPGALLGGVLLGVIEIFAKSFS--------------TELSDAVVFAVLIVVL 289

Query: 333 LMRSHSLLR 341
           L++   LL 
Sbjct: 290 LVKPTGLLG 298


>gi|238061206|ref|ZP_04605915.1| ABC branched-chain amino acid transporter permease component
           [Micromonospora sp. ATCC 39149]
 gi|237883017|gb|EEP71845.1| ABC branched-chain amino acid transporter permease component
           [Micromonospora sp. ATCC 39149]
          Length = 371

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 51/327 (15%), Positives = 106/327 (32%), Gaps = 13/327 (3%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L        +      +    L++   A G  ++ G  G+LS    + +A G Y   IL 
Sbjct: 49  LPGIFEGPLNSPGTLQLLAVCLVFGGLAAGYDLLFGRTGMLSFGHALYFAAGVYGTDILV 108

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           +R GL +W    ++         ++G  +L+  G   A+ TL  +++   ++ +      
Sbjct: 109 TRAGLPLWQAALLTITGGTILAGLLGAVALRTAGIAFAMVTLAFAQVGAILVAR------ 162

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                     L      +   +         V   + +Y++ L    L   ++  +  + 
Sbjct: 163 ------DFGGLTGGEEGLPLDVSGLPAGLVGVANTVNLYWLALAYLTLVVLVVHRVSGSP 216

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
                  +RD+++    L       KL AF ++       G  +       SP +     
Sbjct: 217 TGRVLAGLRDDERRVGVLGLDPYRFKLVAFTLAGGLAAGGGVVYCLIVGGASPHITSSEL 276

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY-YFNSLLKFDCSFNMRHTTLM 324
            + ++ +V+LGG  +         +   +              SL  F      +   ++
Sbjct: 277 TLSLLVMVVLGGPGTRWGPVLGGVLYTYLDHRLTAFGASDAVESLPAFLSRPLSQPLFVL 336

Query: 325 VIALFLVILMRSHSLLRLRTPSNFLER 351
                L +      L  LR+    L R
Sbjct: 337 GTVFILAVYFFPGGLASLRSRLTPLAR 363


>gi|78065484|ref|YP_368253.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia sp. 383]
 gi|77966229|gb|ABB07609.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia sp. 383]
          Length = 395

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 46/347 (13%), Positives = 96/347 (27%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 52  VAIGIGVPLAALVAPESSAFHLSAYAMTLTGKLMCYAIAALALDLVWGYCGILSLGHGLF 111

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 112 FALGGYAIGMYLMREIGRDGKYGSDLPDFMVFLDWHQLPWYWSGTQHLAWALALVVLVPA 171

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            Y  +  +          R   F  +
Sbjct: 172 VLAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 231

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +  +      L+      +  + +      +RD +     L  + +  KL  +
Sbjct: 232 SPGTRTVLLLMTFATLVLAFIAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 291

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+   G+AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 292 TVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 351

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +                  F       + +   LV L+    ++ L
Sbjct: 352 SVFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGL 384


>gi|300310992|ref|YP_003775084.1| branched-chain aminoacid ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300073777|gb|ADJ63176.1| ABC-type branched-chain aminoacid transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 308

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 48/311 (15%), Positives = 102/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G ++V G +G+++      Y I +Y  ++  +           L
Sbjct: 12  LVNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIASYVGLVTLTAIGVQSGYPLPL 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS +++G  G  +   + +       +  LI +      L  +  I  G    
Sbjct: 72  LLGGALIVSVLVTGLYGWTVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +   + F       V        ++     L  ++ L++ R+ +  A 
Sbjct: 129 ----RDMSVPVLISGALEFQMGSDFTVTIPYSRMVIVGVTLVLMVALTLFIARSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++      L           F + +    + G   A +  +++P    F   I   
Sbjct: 185 RACAEDMGMANLLGIDTNKVISFTFVLGAMLAAVGGVLIALTIGKLNPY-IGFIAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L        G     +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYLPSEYKDVVSFG-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|261821760|ref|YP_003259866.1| urea ABC transporter permease [Pectobacterium wasabiae WPP163]
 gi|261605773|gb|ACX88259.1| urea ABC transporter, permease protein UrtC [Pectobacterium
           wasabiae WPP163]
          Length = 362

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 52/327 (15%), Positives = 96/327 (29%), Gaps = 27/327 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
                 Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 46  PLAISTYTLTLIGKILCYAIVAVALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 105

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS---EIFQNILI 138
                      W  +P     +     ++ L  L                  +     ++
Sbjct: 106 EGMPAFMSFLSWTELPWFWAGTQYFVWVLCLIVLVPGVLAFVFGWFAFRSKIKGVYFSIM 165

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                  G    +  +  +              FP +     I ++   + +   S  + 
Sbjct: 166 TQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPITATGTRIGLFVATVLLLVASLLVG 225

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 226 FALARSKFGRVLTAVRDAENRLMFCGYDPKGFKLFVWTLSAVLCGLAGALYVPQVGIINP 285

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        I+ G                  F  +F  
Sbjct: 286 SEMSPTNSIEAAIWVALGGRGTLIGPLLGAGIVNGAKSW--------------FTVAFPE 331

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345
                + +   LV L     ++ L   
Sbjct: 332 YWLFFLGLMFILVTLFLPRGVIGLLRR 358


>gi|53721612|ref|YP_110597.1| high-affinity branched-chain amino acid transport system permease
           protein [Burkholderia pseudomallei K96243]
 gi|76818755|ref|YP_337290.1| high-affinity branched-chain amino acid transport system permease
           [Burkholderia pseudomallei 1710b]
 gi|126442669|ref|YP_001061862.1| high-affinity branched-chain amino acid ABC transporter permease
           [Burkholderia pseudomallei 668]
 gi|126456016|ref|YP_001074809.1| high-affinity branched-chain amino acid ABC transporter permease
           [Burkholderia pseudomallei 1106a]
 gi|134284152|ref|ZP_01770845.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 305]
 gi|167722717|ref|ZP_02405953.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei DM98]
 gi|167741687|ref|ZP_02414461.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 14]
 gi|167818879|ref|ZP_02450559.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 91]
 gi|167827252|ref|ZP_02458723.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 9]
 gi|167848742|ref|ZP_02474250.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei B7210]
 gi|167897336|ref|ZP_02484738.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 7894]
 gi|167905695|ref|ZP_02492900.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei NCTC 13177]
 gi|167914001|ref|ZP_02501092.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 112]
 gi|167921913|ref|ZP_02509004.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei BCC215]
 gi|217425489|ref|ZP_03456982.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 576]
 gi|226194948|ref|ZP_03790539.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei Pakistan 9]
 gi|237508918|ref|ZP_04521633.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei MSHR346]
 gi|242311665|ref|ZP_04810682.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 1106b]
 gi|254182335|ref|ZP_04888930.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 1655]
 gi|254187396|ref|ZP_04893909.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254198789|ref|ZP_04905209.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei S13]
 gi|254265059|ref|ZP_04955924.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 1710a]
 gi|254299838|ref|ZP_04967286.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 406e]
 gi|52212026|emb|CAH38033.1| high-affinity branched-chain amino acid transport system permease
           protein [Burkholderia pseudomallei K96243]
 gi|76583228|gb|ABA52702.1| high-affinity branched-chain amino acid transport system permease
           protein [Burkholderia pseudomallei 1710b]
 gi|126222160|gb|ABN85665.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 668]
 gi|126229784|gb|ABN93197.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 1106a]
 gi|134244470|gb|EBA44575.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 305]
 gi|157809699|gb|EDO86869.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 406e]
 gi|157935077|gb|EDO90747.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|169655528|gb|EDS88221.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei S13]
 gi|184212871|gb|EDU09914.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 1655]
 gi|217391452|gb|EEC31481.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 576]
 gi|225932753|gb|EEH28749.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei Pakistan 9]
 gi|235001123|gb|EEP50547.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei MSHR346]
 gi|242134904|gb|EES21307.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 1106b]
 gi|254216061|gb|EET05446.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 1710a]
          Length = 308

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 100/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G S+V G +G+++      Y +GAY  ++  +           +
Sbjct: 12  LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMLGAYVGLVTLTAIGTSAGYPLPV 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS +++G  G  +   + +       +  LI +      L  +  I  G    
Sbjct: 72  VLGAALVVSVVVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +             V        ++     L  ++ L++  + +  A 
Sbjct: 129 ----RDMSVPVLISGAFDIHLGGDFDVTVPYARLLIVCVTIVLMIALTLFIAHSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ +    L           F + +    + G     +  +++P    F   I   
Sbjct: 185 RACAEDMRMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L        G     +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPAEYKDVVAFG-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|299533057|ref|ZP_07046443.1| inner-membrane translocator [Comamonas testosteroni S44]
 gi|298718942|gb|EFI59913.1| inner-membrane translocator [Comamonas testosteroni S44]
          Length = 356

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 109/309 (35%), Gaps = 7/309 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++                   ++  ++LI+V+      +++G  G++S    + +
Sbjct: 15  VLAVLLLAIFAGLALAPFLFPGVKALNVAAKVLIFVVLVASFDLLLGYTGIVSFAHTMFF 74

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG---LPSLKFRGDYLAIATLIMSE 131
            IGAY   I  +R G     L            ++     L SL+ R  + A+ TL ++ 
Sbjct: 75  GIGAYGVAIASTRLGAGWGALAAGLGGALVVSLLLSLAIGLFSLRVRAIFFAMITLAVAA 134

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            FQ +  +    T G+ G+      +   +        F         +I  YY+L  + 
Sbjct: 135 AFQTLASQLSDWTGGEDGLTFKMPEWLSPSFEPFENDIFGVTIDG---KILSYYLLFVVA 191

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                ++L +  +      + IR+N+    ++   ++  + ++  +S+ F  +AGA  A 
Sbjct: 192 VALVLMLLRIVNSPFGRVLQAIRENEFRAEAIGYRVVVYRTTSSVLSALFACVAGAMLAV 251

Query: 252 SRDR-ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                       F   +  + IV++GGM ++        + +        +      +  
Sbjct: 252 WLRYNGPDTSLSFEIMMDCLLIVVIGGMGTIYGAVIGAVVFLIAQSYLQDLLRMASEASA 311

Query: 311 KFDCSFNMR 319
                  + 
Sbjct: 312 SLPWLAALL 320


>gi|171057448|ref|YP_001789797.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
 gi|170774893|gb|ACB33032.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
          Length = 311

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 101/305 (33%), Gaps = 6/305 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G + L++        +GA     + + +  +       
Sbjct: 8   IINGLVLGSMYALVALGYTMVYGIISLINFAHGEVLMVGAMVSWTVATAFQDAGIAAPGW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      I+   +L +  + +A   L  +     ++         +    +  +   
Sbjct: 68  VILLISMVAAIIVCSALNYTIEKVAYRPLRNAPRLAPLITAMGMSLLLQTLAMIIWKPNP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                      F       +  +    +L+    + A ++  + +T +  A R   +N +
Sbjct: 128 KPYPQLIPAEIFFLWEDGPVITLTQVLILVTTAVVLAGLLYLVNKTKLGRAMRATAENPR 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + F + +A   +AG  +AA+   +   M  F   +   +  + GG+
Sbjct: 188 VAGLMGVRPDHIISATFIIGAALAAIAGIMWAANYGTLQHSM-GFMPGLKAFTAAVFGGI 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  +  G        L       +        + L LV+ +R   
Sbjct: 247 GNLTGAMVGGVLLGLIEAIGAGYLGDLTGGLFG-----SHYVEIFAFLVLILVLTLRPSG 301

Query: 339 LLRLR 343
           L+  R
Sbjct: 302 LMGER 306


>gi|146311642|ref|YP_001176716.1| inner-membrane translocator [Enterobacter sp. 638]
 gi|145318518|gb|ABP60665.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Enterobacter sp. 638]
          Length = 524

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 86/288 (29%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY   ++           + +  +++     ++       
Sbjct: 251 ITYGLLGVINMAHGEMLMLGAYCTWMVQQAMAQFAPQWLALYPIVALPVAFLVTAGVGMA 310

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                ++   +     + +L  W         + +      L     + +       + +
Sbjct: 311 LER--SVIRHLYGRPLETLLATWGISLMIIQLVRMTFGAQNLEVANPAWLSGGVQVFANL 368

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       VL+ +  +     L L +T +    R +  N+              + AF +
Sbjct: 369 ILPWNRIAVLVFVLLVLFFTWLILNKTRLGLNVRAVTQNRNMAACCGVPTGRVDMLAFGL 428

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+LGG+  L+    A   L    ++
Sbjct: 429 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVAAAFGLGIFNKI 486

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                    ++++A+ L I  R   L  L+  
Sbjct: 487 LEPQMGAVLGK-------------IVILVAIILFIQKRPQGLFALKGR 521


>gi|56420470|ref|YP_147788.1| ABC transporter permease [Geobacillus kaustophilus HTA426]
 gi|56380312|dbj|BAD76220.1| ABC transporter (permease) [Geobacillus kaustophilus HTA426]
          Length = 352

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 52/291 (17%), Positives = 94/291 (32%), Gaps = 13/291 (4%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
           +     LFL      ++  S+  + L + + A G+S++ G  G+LSL   + + +GAY  
Sbjct: 9   WLFFAALFLAPFYLTEFRLSLLGKFLCFAIVAVGISLIWGYTGILSLGHGVYFGLGAYCM 68

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +          L   +               +        AIA   +     + L    
Sbjct: 69  AMYLKLEASQGHLPDFMEWSGVRELPWFWKPFAHPMVAIAAAIALPTLLAALLSYLTFKN 128

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRF-------------FRFPSSFVIYEIFMYYVLL 188
            I      +     +    T       +             F F  S  + +I +Y++  
Sbjct: 129 RIKGVYFSLLSQAVVVVFVTLFIGKQEWTGGTNGLTNFSTVFGFSLSSPLTQIVLYWLTT 188

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
               L       L    +      IRD +     L       K+  +++S+AF G+AGA 
Sbjct: 189 ACLALIFVAARRLTSGRLGKVLIAIRDAENRVRFLGFNPTVYKVFVYSLSAAFAGVAGAL 248

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           F      ISP+M     +I ++    +GG  SL        ++        
Sbjct: 249 FVLQVGLISPEMMGIIPSIEMVLWAAVGGRQSLMGAIIGAIVMNTAKSFLS 299


>gi|167578589|ref|ZP_02371463.1| high-affinity branched-chain amino acid transport system permease
           protein [Burkholderia thailandensis TXDOH]
          Length = 308

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 47/311 (15%), Positives = 99/311 (31%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G S+V G +G+++      Y +GAY  ++  +           L
Sbjct: 12  LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMLGAYIGLVTLTAIGTSAGYPLPL 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS +++G  G  +   + +       +  LI +      L  +  I  G    
Sbjct: 72  VLGAALVVSVIVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +             V        ++     L  ++ L++  + +  A 
Sbjct: 129 ----RDMSVPVLISGAFDIHLGGDFDVTVPYARLLIVCVTIVLMIALTLFISHSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    + +    L           F + +    + G     +  +++P    F   I   
Sbjct: 185 RACAQDMRMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L        G     +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPTEYKDVVAFG-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|303327495|ref|ZP_07357936.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Desulfovibrio sp. 3_1_syn3]
 gi|302862435|gb|EFL85368.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Desulfovibrio sp. 3_1_syn3]
          Length = 341

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 95/299 (31%), Gaps = 17/299 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
             +  IY + A G ++V G + L++      Y +GA++ +++    G+  +    +  + 
Sbjct: 53  LTRGSIYALIALGYTLVYGIIELINFAHGEIYMLGAFTALLVAGVLGVYGFPAAGILIIA 112

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           + A  +                          + LI    ++       +  +       
Sbjct: 113 ALAAVIWCAAYGFTLEKVAYKPLRGA---PRLSPLISAIGMSIFLQNYVLLAQTSDFVPF 169

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
            R L           +     + +LL       ++ L++R T +  A R    N+K    
Sbjct: 170 PRLLPEMEFLEYVNYVMGPSDFLILLVSTLAMVALSLFIRFTRMGKAMRATAQNRKMALL 229

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L     +     F + S    + G   A+   +++     F   +   +  +LGG+ S+ 
Sbjct: 230 LGINADWIISLTFIIGSGLAALGGVLIASHMGQVNF-GIGFLAGLKAFTAAVLGGIGSIP 288

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  +L        G     +  +L F               L L+++ R   +L 
Sbjct: 289 GAMVGGLVLGLAESFTTGYFSGNYEDILAFG-------------ILILILIFRPDGILG 334


>gi|50084918|ref|YP_046428.1| branched chain amino acid ABC transporter permease [Acinetobacter
           sp. ADP1]
 gi|49530894|emb|CAG68606.1| putative branched-chain amino acid permease protein (ABC
           superfamily, membrane) [Acinetobacter sp. ADP1]
          Length = 356

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 49/341 (14%), Positives = 103/341 (30%), Gaps = 27/341 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             ++ ++  L L           Y  ++  +I+   + A  L +V G  G+LSL   + +
Sbjct: 21  FLVVMILPWLHLVPSDSPFYLSAYWVTLIGKIMCLALVALSLDLVWGYAGILSLGHGLYF 80

Query: 75  AIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           A+G Y++ +                   W  +P   + +      + L  L         
Sbjct: 81  ALGGYAFGMYLMRQSAGDGLPDFMRFLSWNELPWFWVGTEHFIWAVLLVVLVPGVIAFIF 140

Query: 125 ATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                    +     +I            +  +  +              F  +  +   
Sbjct: 141 GFFAFRSKIKGVYFSIITQAMTFAAALLFFRNETGFGGNNGFTGFKTILGFDITSSMTRA 200

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            + +V   +  L    +  L           IRD++     L    ++ KLSA+ +S+  
Sbjct: 201 VLCFVTALILMLCFIGLRILMNQPYGRVLGAIRDSENRLQYLGYRTLWYKLSAWVLSAVI 260

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AGA +      I+P       +I +   V  GG  +L        ++ G+       
Sbjct: 261 AGIAGALYVPQAGIINPSEMNPVNSIEMAVWVAAGGRGTLIGPILGAGLINGLKTY---- 316

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                     F  +       ++     +V L     ++ L
Sbjct: 317 ----------FTVAAPEFWLIILGALFIVVTLFLPKGVIGL 347


>gi|225375069|ref|ZP_03752290.1| hypothetical protein ROSEINA2194_00692 [Roseburia inulinivorans DSM
           16841]
 gi|225213141|gb|EEG95495.1| hypothetical protein ROSEINA2194_00692 [Roseburia inulinivorans DSM
           16841]
          Length = 293

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 101/305 (33%), Gaps = 23/305 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      +Y + A G ++V G   +L+        +G Y   +  S  G      +
Sbjct: 5   SYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMVGCYIVFMTMSGQGWGAVPAV 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +S ++    G+++   + K       +A LI +      L     +  G       + +
Sbjct: 65  VLSIIVCTVLGIVIEKIAYKPLRKATPLAVLITAIGVSYFLENAALLIFGADTRSFTNVV 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +             +          L    + A+++L++++T    A   + ++
Sbjct: 125 TLPALKLAG---------GALTISGTTIVTFLACVVIMAALMLFIKKTKAGQAMLAVSED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ S    +AG  F ++   ++P        I   +  + G
Sbjct: 176 KDAAQLMGVNVNATISLTFAIGSGLAAVAGVLFCSAYPTLTPYT-GAMPGIKAFTAAVFG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        +L  +  L         +               ++   L +V+L++ 
Sbjct: 235 GIGSIPGALIGGILLGVIEILGRAYISSQLSDA-------------IVFAVLIIVLLVKP 281

Query: 337 HSLLR 341
             +L 
Sbjct: 282 SGILG 286


>gi|114706264|ref|ZP_01439166.1| ABC transporter permease protein [Fulvimarina pelagi HTCC2506]
 gi|114538125|gb|EAU41247.1| ABC transporter permease protein [Fulvimarina pelagi HTCC2506]
          Length = 343

 Score = 86.1 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 61/344 (17%), Positives = 126/344 (36%), Gaps = 29/344 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +++    +    +   L L   L +     ++     +I+++ + A  L +V+G   ++S
Sbjct: 26  VSREGAAVAATILFAALALLPLLASAIDDPFLIVTATRIMVFALAALALDLVLGFGAMVS 85

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                   IGAYS  IL S     I +   V+   +    +I G  SL+  G Y  + TL
Sbjct: 86  FGHAAFLGIGAYSVAILSSHGVEDILVQTLVALGTASLFALITGAISLRTSGVYFIMITL 145

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              ++    +I       G  G+ + +R                  S  +  ++ ++YV+
Sbjct: 146 AFGQMAYFFMISLSA-YGGDDGMTLWNRSTV-------------LGSDVLESDLVLFYVV 191

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    L+   +  +  +      R  RDN     ++  +    +L+A+ +S A   +AG 
Sbjct: 192 LAALVLAFFALRAVVGSRFGRVLRGTRDNATRMRAIGFSPYSYQLTAYVMSGAIAALAGV 251

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
           F A   + +SP    +  +  +I +V++GGM +L         L+   E    +  +Y  
Sbjct: 252 FLANQTEFVSPAYMNWQRSGELIVMVVIGGMGTLVGPIAGAIALLLAEEWLANLWEHY-- 309

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                          ++ + +  + L     +           R
Sbjct: 310 -------------KLVLGVLIVCLALFTRGGIAGAARRLFRGGR 340


>gi|47568335|ref|ZP_00239037.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus G9241]
 gi|47555028|gb|EAL13377.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus G9241]
          Length = 333

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 58/334 (17%), Positives = 128/334 (38%), Gaps = 31/334 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 15  VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74

Query: 81  YVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +          +  + +  + +IS     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 75  VALLFDRQGVSITNFLIGLVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YYV L    +   +
Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L       
Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATAYPIF 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            R T ++ +   +V+L+    L+        ++R
Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGTVKSLKNMKR 320


>gi|310829096|ref|YP_003961453.1| inner-membrane translocator [Eubacterium limosum KIST612]
 gi|308740830|gb|ADO38490.1| inner-membrane translocator [Eubacterium limosum KIST612]
          Length = 291

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 99/303 (32%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      IY + A G ++V G L L++         GAY   I  +      W +I  
Sbjct: 7   FINGLNSGSIYALIAIGYTLVYGILKLINFAHGEIMMFGAYFAFIAATTLNWPFWAVIAF 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +++   G+++   + +   +   ++ LI +      L     +  G     +      
Sbjct: 67  SMILTAVMGVVIEFIAYRPLRNAPRLSALITAIGVSMFLQNLALMIFGADPKVMPKIFPQ 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +            F    +         +         + L++++T    A R + +NQ 
Sbjct: 127 VV-----------FHVGGLEINSITLITIGLSVLFMILLELFIQKTKQGRAMRAVSENQN 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       F + SA   + G  ++ +   I+P M      +      +LGG+
Sbjct: 176 AAILMGINVNRTISLTFLIGSALGALGGILYSTAYLNIAPTMGTM-PGLKAFVAAVLGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +  +        +                ++ + L +V+L +   
Sbjct: 235 GSVPGAMLGGFIIGMIETMTKAYISSTWADA-------------IVFLVLIIVLLFKPTG 281

Query: 339 LLR 341
           +L 
Sbjct: 282 ILG 284


>gi|284161325|ref|YP_003399948.1| inner-membrane translocator [Archaeoglobus profundus DSM 5631]
 gi|284011322|gb|ADB57275.1| inner-membrane translocator [Archaeoglobus profundus DSM 5631]
          Length = 309

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 60/323 (18%), Positives = 124/323 (38%), Gaps = 26/323 (8%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L     +      K +  M     ++V++     +V G +G ++L  V+   +GAY
Sbjct: 5   LILALTAIPLIFPFVLPKSVVFMLGLAYLFVVYVVTWDLVAGYVGEVNLGHVVFIGLGAY 64

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  +L     + + + I V A+++   G+ +G   L+ +G YLA+ T I+  +F  I+  
Sbjct: 65  TSALLVLNQNVPVPISILVGAVVATLFGLGVGAVCLRLKGYYLALVTAILPLVFVQIVNI 124

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           +  I  G  G+ V                     ++        YY+       S  ++ 
Sbjct: 125 YPQIFGGYEGLSV------------------GIKNALHRTTEGRYYIAYAFMLASVLVLY 166

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +      + IRD+ +   SL   +   K+ AF +S+   G+AGA  A  R  +  D
Sbjct: 167 RVVNSKFGLRLKAIRDDPELAESLGINVFKHKVMAFCISAFVSGLAGAITAFYRLSVGVD 226

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           MF     +++I   + GG+ +          +  +          +    + +       
Sbjct: 227 MFGVPLMLLIIISAVFGGLGTFFGAIIGALTIYILKN--------WILMEVSYSTGIMGL 278

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
              ++   L ++IL   H +  L
Sbjct: 279 DNLIIYAMLIVLILKMPHGIFGL 301


>gi|120556243|ref|YP_960594.1| inner-membrane translocator [Marinobacter aquaeolei VT8]
 gi|120326092|gb|ABM20407.1| L-leucine ABC transporter membrane protein / L-isoleucine ABC
           transporter membrane protein / L-valine ABC transporter
           membrane protein [Marinobacter aquaeolei VT8]
          Length = 307

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 97/297 (32%), Gaps = 16/297 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +       Y + A G ++V G +G+++      Y IGAY+ +I  +           L
Sbjct: 11  LINGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGAYTALIAITGLATLGIAWLPL 70

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + + +  + ++S + G  +   + +       +  LI +      L  +  +  G    
Sbjct: 71  VLIVALICAVIVSSSMGWAVERVAYRPVRGRHRLIPLISAIGMSIFLQNYVHLAQGS--- 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R       +    +F    +  +        + +       ++ L++ R+ I  A 
Sbjct: 128 ----RNIGFPALIEGGFQFGSEDTFPMSISYIQITIFITTLICMTALSLFISRSRIGRAC 183

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +  +      L         + F + ++   +AG         +   +F F   +   
Sbjct: 184 RAVSQDLGMANLLGIDTNRIISATFVIGASLAAVAGLLLGMYYGSVD-PLFGFIAGLKAF 242

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  +LGG+ S+        IL     +  G     +  ++ F     +       + 
Sbjct: 243 TAAVLGGIGSIPGAMLGGLILGVAESMTSGYLSGEYKDVVSFSLLILILLFKPTGLL 299


>gi|330899634|gb|EGH31053.1| inner-membrane translocator [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 359

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
           + +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      M L  L      L           + +     
Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  S       ++   + +   S  I 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISAQGTRAALFMATVALLVASLYIG 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 GEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTMAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     +V L     ++ +
Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGM 352


>gi|313109852|ref|ZP_07795786.1| LOW QUALITY PROTEIN: putative permease of ABC transporter
           [Pseudomonas aeruginosa 39016]
 gi|310882288|gb|EFQ40882.1| LOW QUALITY PROTEIN: putative permease of ABC transporter
           [Pseudomonas aeruginosa 39016]
          Length = 529

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 92/295 (31%), Gaps = 31/295 (10%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL----SIWLLIPVSAMISGACGMIMGLP 113
           I  G LG++++       +GAYS  ++   +       + L   ++  ++      +G+ 
Sbjct: 256 ITYGLLGVINMAHGEMLMLGAYSTYVVQLLFQRLAPEWLALYPLLALPVAFCVSAAIGMA 315

Query: 114 SLKFRGDYLAIAT---LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
             +    +L       L+ +     +LI+   +  G   + VA+            +   
Sbjct: 316 LERTVIRHLYGRPLETLLATWGISLVLIQLVRMLFGAQNVEVANPA---------WLSGG 366

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                 ++       ++    F+     L L RT +    R +  N+             
Sbjct: 367 IQVLPNLVLPWNRIVIIGFALFVLLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVPTGRV 426

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
            + AF + S   G+ G   A S+             I    +V+LGG+  L+    A   
Sbjct: 427 DMLAFGLGSGIAGLGGV--ALSQVGNVGPDLGQGYIIDSFLVVVLGGVGQLAGSVLAAFG 484

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           L    ++                         L++  + L I  R   L  L+  
Sbjct: 485 LGVANKILEPQIGAVLGK-------------ILILALIVLFIQKRPQGLFALKGR 526


>gi|296391693|ref|ZP_06881168.1| putative branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas aeruginosa PAb1]
          Length = 529

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 92/295 (31%), Gaps = 31/295 (10%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL----SIWLLIPVSAMISGACGMIMGLP 113
           I  G LG++++       +GAYS  ++   +       + L   ++  ++      +G+ 
Sbjct: 256 ITYGLLGVINMAHGEMLMLGAYSTYVVQLLFQRLAPEWLALYPLLALPVAFCVSAAIGMA 315

Query: 114 SLKFRGDYLAIAT---LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
             +    +L       L+ +     +LI+   +  G   + VA+            +   
Sbjct: 316 LERTVIRHLYGRPLETLLATWGISLVLIQLVRMLFGAQNVEVANPA---------WLSGG 366

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                 ++       ++    F+     L L RT +    R +  N+             
Sbjct: 367 IQVLPNLVLPWNRIVIIGFALFVLLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVPTGRV 426

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
            + AF + S   G+ G   A S+             I    +V+LGG+  L+    A   
Sbjct: 427 DMLAFGLGSGIAGLGGV--ALSQVGNVGPDLGQGYIIDSFLVVVLGGVGQLAGSVLAAFG 484

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           L    ++                         L++  + L I  R   L  L+  
Sbjct: 485 LGVANKILEPQIGAVLGK-------------ILILALIVLFIQKRPQGLFALKGR 526


>gi|269125017|ref|YP_003298387.1| inner-membrane translocator [Thermomonospora curvata DSM 43183]
 gi|268309975|gb|ACY96349.1| inner-membrane translocator [Thermomonospora curvata DSM 43183]
          Length = 362

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 60/310 (19%), Positives = 121/310 (39%), Gaps = 11/310 (3%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
               + +  + G+  +   + A G++++ G+ G LS+      A+GAY YV L +     
Sbjct: 23  PFYLESFWLTAGVFAMAAAIGAIGINLLTGATGQLSMGHAFFLAVGAYGYVYLAAEPEGG 82

Query: 92  I-------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
           +        L   ++  ++GA G +    + + +G YL IATL +  + Q++L    P+T
Sbjct: 83  LGGLGLPTPLAAVLAVALAGAAGGLFSPIAGRLKGAYLGIATLALIFLGQHVLFNAGPVT 142

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G  G  V     F                     ++++    L       +  +   R 
Sbjct: 143 GGYNGRPVPPLEIFGFVFADDPQVVLLGVPFGAAEKLWLLAAALLALAAWFARGVLADR- 201

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
               A  TIRD++ A   +   +   +   F +SS + G+AG   A +  +  P  F   
Sbjct: 202 -PGRAMNTIRDHETAAGVMGVPVARYRAGVFVLSSMYGGLAGVLLALTFQQTVPSYFDML 260

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF--YYFNSLLKFDCSFNMRHTT 322
            ++  ++++++GG+ S+       A +  + E+    +       +      S       
Sbjct: 261 RSLDYLAMIVIGGLGSVGGAVIGAAFVSLLPEVLGRYSEALPLVAAPGSGGFSPAEASRV 320

Query: 323 LMVIALFLVI 332
           L  IA+  V+
Sbjct: 321 LYGIAVVAVV 330


>gi|87123409|ref|ZP_01079260.1| putative membrane protein of ABC transport system [Synechococcus
           sp. RS9917]
 gi|86169129|gb|EAQ70385.1| putative membrane protein of ABC transport system [Synechococcus
           sp. RS9917]
          Length = 373

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 46/351 (13%), Positives = 96/351 (27%), Gaps = 32/351 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + +       L     ++  L   +     +  ++  + L   + A G+ ++ G  GLLS
Sbjct: 2   MTRRRFPWSWLLWAVVIVAVLLAPSVL-PVFRLNLLGRYLALAIVALGIDLIWGFTGLLS 60

Query: 68  LNCVIAYAIGAYSYVILGSRY------GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           L   I +A+G Y+  +                                   P        
Sbjct: 61  LGQGIFFALGGYAAAMFLQLGSASDAAHGLPEFFSLYGVDQLPLFWEPFRSPLFTLIAIA 120

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV-----------RSLIRFF 170
           L  A +     +     + K +             +                   +   F
Sbjct: 121 LIPALVAAGLGYLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDVTMLF 180

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                    +   +++   +  +S   + WL R    +    IRD++             
Sbjct: 181 GQMVGSEGMQRGFFWLTAALVIVSWLFVRWLVRGRFGDVLIAIRDDESRLRFTGYNPTQF 240

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           K   FA++ A  G++GA +      +SP       +I ++  V +GG  +L        +
Sbjct: 241 KTIVFALAGALAGVSGALYTVQSGIVSPQYMTVPFSIEMVIWVAVGGRGTLLGAVLGAVL 300

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +     L                 +       +      LV+ +    LL 
Sbjct: 301 INYAKSLVSE--------------AIPESWMFIQGGLFILVVTVLPQGLLG 337


>gi|296137602|ref|YP_003644844.1| inner-membrane translocator [Thiomonas intermedia K12]
 gi|295797724|gb|ADG32514.1| inner-membrane translocator [Thiomonas intermedia K12]
          Length = 311

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 67/325 (20%), Positives = 134/325 (41%), Gaps = 30/325 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +     +          +    +     +Y + A    IV+G  G+  +   + + +GAY
Sbjct: 13  IGAAFWVIGLAIPLVLDQTWVFIAALFAVYAIVALSQDIVLGRAGMFDMGHAVYFGVGAY 72

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-I 138
              IL +R+   I+   PV+ +++G  G ++  P +K RGDYL +AT+  + IF   L  
Sbjct: 73  VTSILNTRFNWPIFATWPVAILVAGLVGAVLAAPIVKLRGDYLLVATIGFNAIFVLALRN 132

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +T G  GI+        G ++ S                  +++      +   +I
Sbjct: 133 NLGHLTGGSDGIFGIGVPSLFGFSLSSQN--------------AQFWLDWLAFAVVLLLI 178

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+ +   +  ++ +Q A  ++       ++ AFA+ +A  G AG  FA     +SP
Sbjct: 179 RNLDRSHLGRVFYYLKHDQLAATTMGVDARAYRVLAFALGAALAGFAGTLFATLMAAVSP 238

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F F+E++ + +IV++GG  S+  +   T ++  V ++      Y              
Sbjct: 239 GAFVFTESVTLFAIVLVGGQGSIPGVLLGTVLMFVVPQIFRSFAEY-------------- 284

Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343
               +  IA+ +V+++R   +   R
Sbjct: 285 -RYFIFGIAMVVVMVLRPQGIWPRR 308


>gi|238894647|ref|YP_002919381.1| high-affinity branched-chain amino acid ABC transport system
           permease component [Klebsiella pneumoniae NTUH-K2044]
 gi|238546963|dbj|BAH63314.1| high-affinity branched-chain amino acid ABC transport system
           permease component [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 357

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 48/336 (14%), Positives = 98/336 (29%), Gaps = 27/336 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L L           ++ ++  +IL Y + A  L +V G  G+LSL   I +A+G Y+  
Sbjct: 33  FLALLPASHPLAVPSWLLTLSGKILCYAIVAVALDLVWGYAGMLSLGHGIFFALGGYAMG 92

Query: 83  IL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
           +               S    S                 ++ L        +   A    
Sbjct: 93  MYLMRQAAGDGLPAFMSFLSWSELPWFWWGTQHFAWAMALVVLVPGLLALVFGWFAFRSK 152

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            +     ++       G    +  +  +              FP +       ++   + 
Sbjct: 153 IKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPVTATGTRASLFMATVL 212

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +   L ++        +RD +             KL  + +S+   G+AGA +
Sbjct: 213 LLLLTLWLGAALAQSKFGRILTAVRDAENRLMFCGYDPRGFKLLVWTLSAVLCGLAGALY 272

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                 I+P     + +I     V LGG  +L        ++ G   +            
Sbjct: 273 VPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGLVNGAKSI------------ 320

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
             F  +        + +   +V L     ++ L   
Sbjct: 321 --FTVAMPEYWQLFLGLIFIIVTLFLPRGVMGLLRR 354


>gi|330006532|ref|ZP_08305631.1| urea ABC transporter, permease protein UrtC [Klebsiella sp. MS
           92-3]
 gi|328535809|gb|EGF62244.1| urea ABC transporter, permease protein UrtC [Klebsiella sp. MS
           92-3]
          Length = 357

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 48/336 (14%), Positives = 98/336 (29%), Gaps = 27/336 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L L           ++ ++  +IL Y + A  L +V G  G+LSL   I +A+G Y+  
Sbjct: 33  FLALLPASHPLAVPSWLLTLSGKILCYAIVAVALDLVWGYAGMLSLGHGIFFALGGYAMG 92

Query: 83  IL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
           +               S    S                 ++ L        +   A    
Sbjct: 93  MYLMRQAAGDGLPAFMSFLSWSELPWFWWGTQHFAWAMALVVLVPGLLALVFGWFAFRSK 152

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            +     ++       G    +  +  +              FP +       ++   + 
Sbjct: 153 IKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPVTATGTRASLFMATVL 212

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +   L ++        +RD +             KL  + +S+   G+AGA +
Sbjct: 213 LLLLTLWLGAALAQSKFGRILTAVRDAENRLMFCGYDPRGFKLLVWTLSAVLCGLAGALY 272

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                 I+P     + +I     V LGG  +L        ++ G   +            
Sbjct: 273 VPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGLVNGAKSI------------ 320

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
             F  +        + +   +V L     ++ L   
Sbjct: 321 --FTVAMPEYWQLFLGLIFIIVTLFLPRGVMGLLRR 354


>gi|163758197|ref|ZP_02165285.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica
           DFL-43]
 gi|162284486|gb|EDQ34769.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica
           DFL-43]
          Length = 367

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 49/339 (14%), Positives = 95/339 (28%), Gaps = 29/339 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A      L   +  +    ++ +      +Y + A  LS+  G  G+L+L   IA+ +GA
Sbjct: 16  AYAVFFALIALIPLSMDDAFLLNQLSTYGVYGILALSLSLCWGFGGILNLGQGIAFGLGA 75

Query: 79  YSYVILGSR------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           Y   +                   +    +P         G+ + L         L    
Sbjct: 76  YGMAMTMQMQTQDAADPIPPFMLNNGLDALPAIWEPFANTGLGIFLALAVPTLYCLIFGA 135

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV---IYEIFM 183
           L+              +    A   V   L +L   V  +          +    Y    
Sbjct: 136 LMFQARVSGPFFAIMTLAMLSAIYTVFIDLQYLTNGVNGISPPQSLMLGSLEVDPYSTTS 195

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           ++ +  +  +       +  +      R   ++ +    L   +   +   + +S     
Sbjct: 196 FWGVYIVLLVCTIAAKLITLSKFGLIVRAQNNDAERVRFLGYNVAVYETLIYTISGLMAA 255

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           +AG  FA     +SP  F  S +I ++    +GG  SL        I+ G          
Sbjct: 256 LAGCCFAYLTQYVSPSQFDVSFSISIVIWAAIGGRGSLLWAILGAFIVQGAQSYL----- 310

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                       F      ++     LV+      L  L
Sbjct: 311 ---------GDEFLNTWILILGFFFILVVRFLPTGLAGL 340


>gi|149191435|ref|ZP_01869685.1| ABC-type branched-chain amino acid transport system, permease
           component [Vibrio shilonii AK1]
 gi|148834704|gb|EDL51691.1| ABC-type branched-chain amino acid transport system, permease
           component [Vibrio shilonii AK1]
          Length = 382

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 50/335 (14%), Positives = 97/335 (28%), Gaps = 33/335 (9%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L         + +  S+  + L Y M A  + +V G LG+LSL     +A+G Y+  +  
Sbjct: 37  LLPVGHPLHVETFTISLMGKYLSYAMLALAVDLVWGYLGILSLGHGAFFALGGYAMGMYL 96

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
            R      +                 LP      D    A L++  +   +   +  +  
Sbjct: 97  MRQIGDRGVYGNPILPDFMVFLDWQALPWFWQGFDQFWFACLMVVLVPGALAYVFGYLAF 156

Query: 146 GKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
                                   +  +  +     +        F       +I ++ +
Sbjct: 157 RSRVSGVYLSIMTQALTYALMLAFFRNEMGFGGNNGLTDFKDILGFSLQQDATKIALFMI 216

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
                 +S  +   +  + +      IRD +     +   +   KL  F +S+   G+AG
Sbjct: 217 TGIALVVSYVVCRTIISSRLGRVSMAIRDTESRTRFMGYDVDGIKLWIFVLSAVIAGVAG 276

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A +      I+P  F    +I V+  V LGG  +L        ++               
Sbjct: 277 ALYVPQVGIINPGEFAPLNSIEVVVWVALGGRATLFGAIVGALVINYAKSW--------- 327

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                F   F       +     L  +     L+ 
Sbjct: 328 -----FTVEFPEVWLFALGGLFVLSTMYFPKGLIG 357


>gi|83716942|ref|YP_440032.1| high-affinity branched-chain amino acid transport system permease
           [Burkholderia thailandensis E264]
 gi|167616731|ref|ZP_02385362.1| high-affinity branched-chain amino acid transport system permease
           protein [Burkholderia thailandensis Bt4]
 gi|83650767|gb|ABC34831.1| high-affinity branched-chain amino acid transport system permease
           protein [Burkholderia thailandensis E264]
          Length = 308

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 47/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G S+V G +G+++      Y +GAY  ++  +           L
Sbjct: 12  LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMLGAYIGLVTLTAIGTSAGYPLPL 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS +++G  G  +   + +       +  LI +      L  +  I  G    
Sbjct: 72  VLGAALVVSVIVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +             V        ++     L  ++ L++  + +  A 
Sbjct: 129 ----RDMSVPVLISGAFDIRLGGDFDVTVPYARLLIVCVTIVLMIALTLFISHSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ +    L           F + +    + G     +  +++P    F   I   
Sbjct: 185 RACAEDMRMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L        G     +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPTEYKDVVAFG-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|332653977|ref|ZP_08419721.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Ruminococcaceae bacterium D16]
 gi|332517063|gb|EGJ46668.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Ruminococcaceae bacterium D16]
          Length = 355

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 78/334 (23%), Positives = 130/334 (38%), Gaps = 23/334 (6%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  +       L +V  L++ +  G       ++   I I  YV  A  L++VVG  G L
Sbjct: 12  KTTRSSLFTYTLVIVAFLIIQVLRGTVGIGSVLEGQLIPICAYVTMALALNLVVGVSGEL 71

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIW-------LLIPVSAMISGACGMIMGLPSLKFRG 119
           SL      +IGA+      S     I        + + V A ++G  G ++G+P L+  G
Sbjct: 72  SLGHAGFMSIGAFMGCSAASALAGVIPFAPLRLAVAMLVGAALAGFFGFLIGIPVLRLNG 131

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           DYLAI TL   EI +++L     +   K G   +            +             
Sbjct: 132 DYLAIVTLAFGEIIKSLLTN-VYLGVDKDGFQFSFLSDKNTLGEGGIQLIKGPMGVMNTA 190

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
            I  +     +  ++  II  L  +    A    RDN+ A  S+  ++   K+ AF  S+
Sbjct: 191 RISSFIAGFILVMITLIIIFNLVNSRTGRAIMAARDNRIAAESVGISVTKYKMIAFVTSA 250

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  G AG  +  S+   +   F F+ +I+++  V+LGG+ ++     A A L  + E   
Sbjct: 251 ALAGAAGTLYGCSQVTFTATKFDFNTSILILVFVVLGGLGNMWGSVIAAAALTILPEALR 310

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
               Y                  +  I L LV+L
Sbjct: 311 QFADY---------------RMLVYAIVLILVML 329


>gi|269123241|ref|YP_003305818.1| inner-membrane translocator [Streptobacillus moniliformis DSM
           12112]
 gi|268314567|gb|ACZ00941.1| inner-membrane translocator [Streptobacillus moniliformis DSM
           12112]
          Length = 298

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 101/302 (33%), Gaps = 20/302 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      IY + A G ++V G + L++        IGAY   +     G ++   + +S
Sbjct: 10  INGLQTGSIYALIALGYTMVYGIVKLINFAHGDILMIGAYISFM-AVNRGFNLTTALIIS 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +     G++M   + +   D   +  LI +     +L     I  G +   +       
Sbjct: 69  IIFCSILGIVMERLAYRPLRDASRMNVLITAIGLSFLLESLALIYFGASPKIIKSEFIPK 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
             +    I  F    S +      ++V++   F    + ++++ T +  A R +  +  A
Sbjct: 129 YLSSSEYISIFGIRVSNLS-----FFVIIVTLFCMLLLHVFIKYTNLGKATRAVSQDISA 183

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +     F     FA+ SA   + G  +A +  RI P M      +      + GG+ 
Sbjct: 184 AKLMGINTDFTISLTFAIGSALGSLGGLMYALTYPRIDPYM-GLLPGLKAFIAAVFGGIG 242

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           ++        ++  +     G     + + + F     +                + + L
Sbjct: 243 NIPGAMVGGYVMGLLETYVKGYISSTWANPIVFILLIIILL-------------FKPNGL 289

Query: 340 LR 341
             
Sbjct: 290 FG 291


>gi|253688544|ref|YP_003017734.1| urea ABC transporter, permease protein UrtC [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251755122|gb|ACT13198.1| urea ABC transporter, permease protein UrtC [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 358

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 52/327 (15%), Positives = 95/327 (29%), Gaps = 27/327 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
                 Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 42  PLAISTYTLTLIGKILCYAIVAVALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 101

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS---EIFQNILI 138
                      W  +P     +      + L  L                  +     ++
Sbjct: 102 EGMPAFMSFLSWTELPWFWAGTQYFAWALCLIVLVPGVLAFVFGWFAFRSKIKGVYFSIM 161

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                  G    +  +  +              FP +     I ++   + +   S  + 
Sbjct: 162 TQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPITATGTRIGLFVATVLLLIASLLVG 221

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 222 FALARSKFGRVLTAVRDAENRLMFCGYDPKGFKLFVWTLSAVLCGLAGALYVPQVGIINP 281

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        I+ G                  F  +F  
Sbjct: 282 SEMSPTNSIEAAIWVALGGRGTLIGPLLGAGIVNGAKSW--------------FTVAFPE 327

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345
                + +   LV L     ++ L   
Sbjct: 328 YWLFFLGLMFILVTLFLPRGVIGLLRR 354


>gi|223984824|ref|ZP_03634933.1| hypothetical protein HOLDEFILI_02231 [Holdemania filiformis DSM
           12042]
 gi|223963198|gb|EEF67601.1| hypothetical protein HOLDEFILI_02231 [Holdemania filiformis DSM
           12042]
          Length = 292

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 45/289 (15%), Positives = 91/289 (31%), Gaps = 12/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GAY   I  ++ G+  +  +  
Sbjct: 8   LINGLSLGSIYALIALGYTMVYGIIKLINFAHGDIYMLGAYIGFICTAQLGMGFFPALAA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  I    G+I+   + K   +   I  LI +      L        G            
Sbjct: 68  AMGICALIGVIIERIAYKPLRNATRITALITAIGVSYFLEASTQKVMGT----------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T   ++   +     V+       +      L   +   +R+T +  A R +  +  
Sbjct: 117 GVKTFPQVLANQKIMIGGVMITTQQIAIFAITIGLMLLLQFIVRKTKVGRAMRAVSVDAD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG       + I+P M      +      + GG+
Sbjct: 177 AARLMGVNVDMTISYTFAIGSALAGAAGVLVGLYYNSINPLM-GMLPGVKAFIAAVFGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +         +  V  L  G     +   + +     +       + 
Sbjct: 236 GIIPGAMFGGFFIGIVETLVSGYGSSLYKDAVVYIILIIILVVKPAGLL 284


>gi|170732231|ref|YP_001764178.1| urea ABC transporter permease protein UrtC [Burkholderia
           cenocepacia MC0-3]
 gi|169815473|gb|ACA90056.1| urea ABC transporter, permease protein UrtC [Burkholderia
           cenocepacia MC0-3]
          Length = 395

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 46/347 (13%), Positives = 95/347 (27%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 52  VAIGIGVPLAALVAPEASAFHLSAYTMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 111

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 112 FALGGYAIGMYLMREIGRDGKYGSDLPDFMVFLDWHQLPWYWNGTQHLAWALALVVLVPA 171

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            Y  +  +          R   F  +
Sbjct: 172 VLAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 231

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +  +      L+      +  + +      +RD +     L  + +  KL  +
Sbjct: 232 SPGTRTVLLLLTFATLVLAFIAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 291

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+   G+AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 292 TVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 351

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                               F       + +   LV L+    ++ L
Sbjct: 352 SFFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGL 384


>gi|77404666|ref|YP_345240.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|221218331|ref|YP_002524358.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
 gi|77390316|gb|ABA81499.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|221163358|gb|ACM04324.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
          Length = 337

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 51/313 (16%), Positives = 102/313 (32%), Gaps = 26/313 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                   I  +    LI  +FA   +++ G  GL S      +AIGAY           
Sbjct: 35  APGLVNPGILFVIGMTLIQAVFALSWNLLFGFTGLASFGHAGFFAIGAYFTGAALRYDFH 94

Query: 91  SIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
             +L  + V+ ++     + +G+ +LK           +        +I + P    + G
Sbjct: 95  LPFLAVLAVAGLLGALVALAIGVVALKRLTGIFLAVLTVALTEAMAKIIGFSPALGEQDG 154

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +    R           +         + +    Y  L+    L  + + W+  + +   
Sbjct: 155 LGNIPRP----------VIEMGLFQIDLTHGDDYYRFLVVATVLIVAALWWVVHSRLGRT 204

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
           +R IR++      +   +   ++ +F +S     +AGA  A     ++ D   +  +   
Sbjct: 205 FRAIREDADRARFVGIDVARYRVISFMISGGTAALAGALSAPLTRIVTLDQVNWLASTQP 264

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           I   +LGG TS       +A    +     G                      ++   L 
Sbjct: 265 ILNSLLGGFTSFWGPIVGSAAFSTINYFTRGF---------------PGLSEIMVGGILV 309

Query: 330 LVILMRSHSLLRL 342
           +VIL+    +L L
Sbjct: 310 VVILVAPTGILGL 322


>gi|332561553|ref|ZP_08415866.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides WS8N]
 gi|332274055|gb|EGJ19373.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides WS8N]
          Length = 337

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 51/313 (16%), Positives = 102/313 (32%), Gaps = 26/313 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                   I  +    LI  +FA   +++ G  GL S      +AIGAY           
Sbjct: 35  APGLVNPGILFVIGMTLIQAVFALSWNLLFGFTGLASFGHAGFFAIGAYFTGAALRYDFH 94

Query: 91  SIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
             +L  + V+ ++     + +G+ +LK           +        +I + P    + G
Sbjct: 95  LPFLAVLAVAGLLGALVALAIGVVALKRLTGIFLAVLTVALTEAMAKIIGFSPALGEQDG 154

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +    R           +         + +    Y  L+    L  + + W+  + +   
Sbjct: 155 LGNIPRP----------VIEMGLFQIDLTHGDDYYRFLVVATVLIVAALWWVVHSRLGRT 204

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
           +R IR++      +   +   ++ +F +S     +AGA  A     ++ D   +  +   
Sbjct: 205 FRAIREDADRARFVGIDVARYRVISFMISGGTAALAGALSAPLTRIVTLDQVNWLASTQP 264

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           I   +LGG TS       +A    +     G                      ++   L 
Sbjct: 265 ILNSLLGGFTSFWGPIVGSAAFSTINYFTRGF---------------PGLSEIMVGGILV 309

Query: 330 LVILMRSHSLLRL 342
           +VIL+    +L L
Sbjct: 310 IVILVAPTGILGL 322


>gi|323486967|ref|ZP_08092282.1| hypothetical protein HMPREF9474_04033 [Clostridium symbiosum
           WAL-14163]
 gi|323399739|gb|EGA92122.1| hypothetical protein HMPREF9474_04033 [Clostridium symbiosum
           WAL-14163]
          Length = 293

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 99/307 (32%), Gaps = 23/307 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      +Y + A G ++V G   +L+        +G ++   + S  G S  + +
Sbjct: 5   SYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDIIMVGGFTVFTIVSTAGGSPVVGV 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             S ++    G+ +   + +       +A LI +     +L     +  G         +
Sbjct: 65  LASVVVCTVLGVTIEKVAYRPLRGASPLAVLITAIGVSYLLQNVALLIFGSNARQFTSVV 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +             +         ++    +  ++  ++ +T I  A   + ++
Sbjct: 125 TLPALKLAG---------GKLSISGVTIVTIITCVIIMLALTTFINKTKIGQAMLAVSED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ S+   +AG    ++   ++P        I      + G
Sbjct: 176 KGAATLMGINVNGTIAVTFAIGSSLAAIAGVLLCSAYPSLTPYT-GSMPGIKAFVAAVFG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        +L  +  L            + F               L +V+L+R 
Sbjct: 235 GIGSIPGAMIGGILLGVIENLAKAYISSQLADAIVFS-------------VLIIVLLVRP 281

Query: 337 HSLLRLR 343
             +L  +
Sbjct: 282 TGILGKK 288


>gi|319763599|ref|YP_004127536.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|330824135|ref|YP_004387438.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317118160|gb|ADV00649.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|329309507|gb|AEB83922.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 297

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 70/302 (23%), Positives = 116/302 (38%), Gaps = 41/302 (13%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             S+   +LIY + A   ++V+   G  S+      AIGAY+  IL   +G S  L I  
Sbjct: 8   YSSVLDHVLIYTLLAMSQAVVL-RAGTFSIGPAAFAAIGAYTSAILAVTHGWSAPLAIAS 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +++G    +M  P  + RG + A+ATL + ++   I   W  +TNG  GI    +   
Sbjct: 67  GTLLAGVVSALMAYPLSRLRGVFQALATLALVQVMVTIAQNWDSVTNGVLGISGIPKAAT 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                          LL +  L   +   L + ++  A   IR ++ 
Sbjct: 127 TG-------------------------WLLLIVALCMLLTWTLGKFSLGRAMDVIRADET 161

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL   + + +  A  +S  F G+AGA  A +   ISP+ F F   +  ++  +LGG 
Sbjct: 162 VAVSLGIRVAYHQRLAMVLSGLFAGLAGALHAFNSYAISPEEFGFHMLVHALASSVLGGA 221

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        +L  + E       Y                  +    L L+I+   H 
Sbjct: 222 TSIWGPLVGAGVLTTLPEFVRFFADY---------------RGVVQGALLMLIIIYLPHG 266

Query: 339 LL 340
           + 
Sbjct: 267 IA 268


>gi|254416412|ref|ZP_05030165.1| amino acid or sugar ABC transport system, permease protein,
           putative [Microcoleus chthonoplastes PCC 7420]
 gi|196176850|gb|EDX71861.1| amino acid or sugar ABC transport system, permease protein,
           putative [Microcoleus chthonoplastes PCC 7420]
          Length = 391

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 51/351 (14%), Positives = 108/351 (30%), Gaps = 32/351 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +   ++    V    LL + +       +  S+  + L   + A  + ++ G  GLL
Sbjct: 16  RKRRQSLLIEGGVVTLIALLLIIVFPLVLSDFRLSLLGRFLALAIAALAIDLIWGYTGLL 75

Query: 67  SLNCVIAYAIGAYSYVILGS----------------RYGLSIWLLIPVSAMISGACGMIM 110
           SL   I +A+G Y+  +  +                      W   P  +       +I+
Sbjct: 76  SLGHGIFFALGGYALAMHLTLAPLEGDSLPEFMSLYGVDKLPWFWQPFDSFGFAVFAVII 135

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
               +     YL     I    F  +      +           +L+     + +     
Sbjct: 136 VPAVVGGLFGYLVFRNRIRGVYFSILTQAATIVFF--NFFNGQQKLFNGTNGLTNYQTLL 193

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
               +    +   Y + + +  +S ++  WL +         IRD++             
Sbjct: 194 GADVNATRTQFIFYTITILLLVVSYALCRWLTQGRFGYLLVAIRDDENRVRFSGYNPTGF 253

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           K+  FA+S+   G+AGA F      +SP     + +I ++  V +GG  +L        +
Sbjct: 254 KVLVFAISAGLAGIAGAMFTLQTGIVSPKAMDIAFSIEMVIWVAVGGRATLVGAILGALV 313

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +     +                 +F             LV+ +    ++ 
Sbjct: 314 VNFAKSILSE--------------NFAESWLFFQGGLFLLVVTVLPSGIVG 350


>gi|167628617|ref|YP_001679116.1| branched-chain amino acid abc transporter, permease component
           [Heliobacterium modesticaldum Ice1]
 gi|167591357|gb|ABZ83105.1| branched-chain amino acid abc transporter, permease component
           [Heliobacterium modesticaldum Ice1]
          Length = 293

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 96/303 (31%), Gaps = 24/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GAY      ++        + +
Sbjct: 8   LINGLSLGSIYALIALGYTMVYGIIRLINFAHGDVYMVGAYVGFFATTQG-WGFLPSLII 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++    G+++   + K       IA LI +      L     +  G       +    
Sbjct: 67  SMVVCAILGVVIERLAYKPLRGAPKIAVLITAIGVSFFLENGGVLAVGAKIRTFPNVFQE 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +     +           V+       +++    L   +   +  T    A R +  + +
Sbjct: 127 VQYHFFN---------GSVVITNRQIVIMVVTVLLMLLLQYIVHYTKTGKAMRAVSHDTQ 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +     + FA+ S+    AG       + I+P M      +      ++GG+
Sbjct: 178 AAMLMGINVDNTISATFAIGSSLAAAAGVLVGIYYNAINPYM-GIMPGLKAFVAAVVGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +         L  +  L  G     +   + F               L ++++++   
Sbjct: 237 GVIPGAFVGGLSLGVIEALVSGYGQSLYRDAVAF-------------ALLIIILIVKPSG 283

Query: 339 LLR 341
           L  
Sbjct: 284 LFG 286


>gi|66043865|ref|YP_233706.1| inner-membrane translocator [Pseudomonas syringae pv. syringae
           B728a]
 gi|63254572|gb|AAY35668.1| inner-membrane translocator [Pseudomonas syringae pv. syringae
           B728a]
          Length = 304

 Score = 85.7 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 86/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P 
Sbjct: 9   MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGVESFPF 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+      F   S FV       ++L+        +   ++ T +    R  + ++K
Sbjct: 129 GVPTLLEGAWRFEVGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL        G+    +  +  F               L L+++ R   
Sbjct: 248 GSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFG-------------LLVLILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|293603116|ref|ZP_06685550.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292818510|gb|EFF77557.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 328

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 124/324 (38%), Gaps = 19/324 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           LA +  L+L           ++  +  + LIY + A  L +V+G   ++S    + + +G
Sbjct: 15  LAGLTVLILLPAAALASGSPFLIGVVTRFLIYGLAAVSLDLVIGYGAMVSFGHAMFFGLG 74

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  I+      +  +     +  +     I  +        +  +A       F  I 
Sbjct: 75  GYAVGIIAFHTAEAGPIFGWAGSNAALVVWPIALIVCALAGWVFGYLALRTRGVQFIMIT 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + +  +        +    ++ G     + +    P   +   +  YYV L +      +
Sbjct: 135 LAFGQMVY----FILVSLQFYGGDDGLMIPQRNVLPGINLESPLVFYYVCLALLTAWTLL 190

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            + +  +      + +R++++   +L       +LSAF +S+   G+AG  +A     ++
Sbjct: 191 CIRITNSRFGMVLQALRESERRAVNLGVAPTPYRLSAFVLSAVGTGLAGVLWANYAGLVT 250

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           PDM  ++++  +++IVILGG+ +L       A+ +G+ ++   +  ++            
Sbjct: 251 PDMAAWTKSGELMAIVILGGVGTLLGPIAGAAVFLGLEQMLSSLTEHW------------ 298

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                 M   L LV+L     L  
Sbjct: 299 ---LLYMGPILVLVVLWGQKGLFG 319


>gi|225387090|ref|ZP_03756854.1| hypothetical protein CLOSTASPAR_00840 [Clostridium asparagiforme
           DSM 15981]
 gi|225046834|gb|EEG57080.1| hypothetical protein CLOSTASPAR_00840 [Clostridium asparagiforme
           DSM 15981]
          Length = 289

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 53/313 (16%), Positives = 120/313 (38%), Gaps = 40/313 (12%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  ++    ++ ++    +  ++G  G+ S+       +GAY+  +L     L + +++
Sbjct: 2   SYYSAVLTSAIVNIIAILSMYTLMGLTGIFSMGQAAFMCVGAYTTGMLAIHSQLPMAVIV 61

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +S ++   C +++G P +K R DY+A+ T+   E    +L     IT G  GI    R 
Sbjct: 62  LISILMGMFCALLVGFPVVKLRRDYIAMITMGFGEAIVALLNNMSNITGGANGINNIPRK 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                       ++ + +      + +  +R+        ++++
Sbjct: 122 -------------------------MTLWLGVIVLVAVLVVTMNFKRSKYGRYCIAVKND 156

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + +  ++   +   KL AF  +S    +AG+  A +   + P  F F+++I  IS V +G
Sbjct: 157 ELSAAAMGINVAKVKLIAFVFASGITALAGSLLAYTTTYVEPTAFGFAKSIDWISFVFVG 216

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ SL+    +  I   + E+    + Y                  +    + LV+    
Sbjct: 217 GVNSLTGTLFSGLIFCTLPEILRFADMY---------------RIIVQCSIVLLVVNFLP 261

Query: 337 HSLLRLRTPSNFL 349
           + L      ++  
Sbjct: 262 NGLFGEHEFTDVF 274


>gi|163789415|ref|ZP_02183854.1| branched-chain amino acid ABC transporter permease protein
           [Carnobacterium sp. AT7]
 gi|159875269|gb|EDP69334.1| branched-chain amino acid ABC transporter permease protein
           [Carnobacterium sp. AT7]
          Length = 292

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 93/289 (32%), Gaps = 12/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GA+      +   LS +  + +
Sbjct: 8   LINGLSLGSIYALIALGYTMVYGIIKLINFAHGDIYMVGAFVGYTAINTLQLSFFPALIL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +     G+ +   + K   +   +A LI +     +L        G            
Sbjct: 68  SMVFCAILGVAIERIAYKPLRNATRVAALITAIGMSYLLQNGMIYLVGSE---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I+   +  + +        +      L  ++ L +++T +  A R +  +  
Sbjct: 118 -TRAFPQVIKNKVYEFAGLQVSQTQIMIFATTIILMLALQLIVQKTKMGKAMRAVSTDAD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S+  G AG       + I   M  ++  +      +LGG+
Sbjct: 177 AARLMGINVDNVISFTFALGSSLAGAAGVLVGLYYNSIE-PMMGYAPGLKAFIAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +         +  +  L  G         + +     +       + 
Sbjct: 236 GIIPGAMFGGFAIGIIETLVSGYGGSLIKDAVVYLILIIILIFKPSGLL 284


>gi|237798304|ref|ZP_04586765.1| inner-membrane translocator [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331021156|gb|EGI01213.1| inner-membrane translocator [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 304

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 85/304 (27%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P 
Sbjct: 9   MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGVESFPF 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+          S FV       ++L+        +   ++ T +    R  + ++K
Sbjct: 129 GVPTLLEGAWRIEIGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL        G+    +  +  F               L L+++ R   
Sbjct: 248 GSLPGAMLGGLILGVAESQFSGLVNSDYKDVFSFG-------------LLVLILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|288549790|ref|ZP_05968163.2| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Enterobacter cancerogenus ATCC 35316]
 gi|288317395|gb|EFC56333.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Enterobacter cancerogenus ATCC 35316]
          Length = 305

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 89/304 (29%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P+
Sbjct: 10  LINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIGLALLSFFGLQSFPL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 70  LILGTLVFTIVVTGVYGWTIERIAYRPLRNSTRLAPLISAIGMSLILQNYVQLSQGPRQQ 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+   +  F     FV       ++L+        +   +  T +    R ++ ++K
Sbjct: 130 GVPTMLDGVLRFHLGDGFVQITYTKVFILIASFAGMLLLTWIISSTRLGRMCRAVQQDRK 189

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A  G+AG     +       +  F   I   +  +LGG+
Sbjct: 190 MASILGINTDRIISMVFVIGAAMAGLAGVLITMNYGTFDFYV-GFVIGIKAFTAAVLGGI 248

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL        GM    +  +  F               L ++++ R   
Sbjct: 249 GSLPGAMLGGLILGVAEAQFSGMVNSDYKDVFSFG-------------LLVVILIFRPQG 295

Query: 339 LLRL 342
           LL  
Sbjct: 296 LLGR 299


>gi|167565274|ref|ZP_02358190.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia oklahomensis EO147]
 gi|167572372|ref|ZP_02365246.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia oklahomensis C6786]
          Length = 308

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G S+V G +G+++      Y IGAY  ++  +           L
Sbjct: 12  LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGVSAGYPLPL 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS +++G  G  +   + +       +  LI +      L  +  I  G    
Sbjct: 72  VLGAALIVSVVVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +             V        ++     L  ++ L++  + +  A 
Sbjct: 129 ----RDMSVPVLISGAFDIHVGGDFDVTVPYARLLIVCVTIVLMIALTLFISHSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ +    L           F + +    + G     +  +++P    F   I   
Sbjct: 185 RACAEDMRMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L        G     +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPAEYKDVVAFG-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|27376561|ref|NP_768090.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27349702|dbj|BAC46715.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 389

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/360 (13%), Positives = 105/360 (29%), Gaps = 38/360 (10%)

Query: 8   LNKYDKILCLLAVVYPLL------LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           L++   I  L+     +L      L       +   Y+ ++  + + Y + A  + ++ G
Sbjct: 10  LDRSATIFLLVVAALGVLIPLSNLLLPAGSFLQVPTYLVALWGKYVCYAILALAIDLIWG 69

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G+LSL     +A+G Y+  +   R   +  +                 LP   +  D 
Sbjct: 70  YCGILSLGHGAFFALGGYAMGMYLMRQIGTRGVYGNPILPDFMVFLNYSKLPWYWYGFDM 129

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162
              A L++  +   +   +  +                          +  D  +     
Sbjct: 130 FWFAALMVLVVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRNDFGFGGNNG 189

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +        F          ++ +      L   +   +  + +      +RD +     
Sbjct: 190 LTDFKDILGFNVQAEGTRAALFALSCLALILGFLVCRAIVSSKLGKVLIAVRDAESRTRF 249

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   +   KL  F VS+   G+AGA +      I+P  F    +I  +  V +GG  +L 
Sbjct: 250 LGYRVESYKLFVFTVSACMAGVAGALYVPQVGIINPSEFAPGNSIEAVIWVAVGGRGTLV 309

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             A    ++                               ++     LV L+    ++  
Sbjct: 310 GAALGAVVVNYAKTFFTS-------------GMLAPYWLFMLGALFILVTLLLPKGIVGT 356


>gi|330501699|ref|YP_004378568.1| inner-membrane translocator [Pseudomonas mendocina NK-01]
 gi|328915985|gb|AEB56816.1| inner-membrane translocator [Pseudomonas mendocina NK-01]
          Length = 363

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/320 (15%), Positives = 96/320 (30%), Gaps = 27/320 (8%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------- 86
             Y  ++  +IL Y + A  L +V G  G+LSL   + +A+G Y+  +            
Sbjct: 51  SAYSLTLVGKILCYAIVALALDLVWGYAGMLSLGHGLFFALGGYAMGMYLMRQSAGDGLP 110

Query: 87  -RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF---QNILIKWKP 142
                  W  +P     +      M L  L      L                 ++    
Sbjct: 111 AFMSFLAWSELPWYWYGTSNFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIMTQAL 170

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
              G    +  +  +          R   F  +       +++  + +   S  +   L 
Sbjct: 171 TFAGMLLFFRNETGFGGNNGFTGFTRILGFDITAQSTRAALFFATVVLLVGSLYLGFRLA 230

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+        +RD +             KL  + +S+   G+AGA +      I+P    
Sbjct: 231 RSKFGRVLTALRDAENRLMFCGYDPRGYKLFIWVLSAVLCGLAGALYVPQVGIINPSEMA 290

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            +++I     V LGG  +L        ++ G+                 F  +F      
Sbjct: 291 PTQSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTVAFPEYWLF 336

Query: 323 LMVIALFLVILMRSHSLLRL 342
            +     +V L     ++ L
Sbjct: 337 ALGALFIVVTLFLPRGVVGL 356


>gi|254246115|ref|ZP_04939436.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia cenocepacia PC184]
 gi|124870891|gb|EAY62607.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia cenocepacia PC184]
          Length = 395

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/347 (13%), Positives = 95/347 (27%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 52  VAIGIGVPLAALVAPEASAFHLSAYTMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 111

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 112 FALGGYAIGMYLMREIGHDGKYGSDLPDFMVFLDWHQLPWYWNGTQHLAWALALVVLVPA 171

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            Y  +  +          R   F  +
Sbjct: 172 VLAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 231

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +  +      L+      +  + +      +RD +     L  + +  KL  +
Sbjct: 232 SPGTRTVLLLLTFATLVLAFIAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 291

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+   G+AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 292 TVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 351

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                               F       + +   LV L+    ++ L
Sbjct: 352 SFFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGL 384


>gi|28872032|ref|NP_794651.1| high-affinity branched-chain amino acid ABC transporter permease
           BraD [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213967948|ref|ZP_03396094.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraD [Pseudomonas syringae pv. tomato T1]
 gi|257482383|ref|ZP_05636424.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraD [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|289623767|ref|ZP_06456721.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraD [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|298484890|ref|ZP_07002989.1| high-affinity branched-chain amino acid transport system permease
           protein [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|301383735|ref|ZP_07232153.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraD [Pseudomonas syringae pv. tomato Max13]
 gi|302059290|ref|ZP_07250831.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraD [Pseudomonas syringae pv. tomato K40]
 gi|302131562|ref|ZP_07257552.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraD [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|28855285|gb|AAO58346.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraD [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213927291|gb|EEB60840.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraD [Pseudomonas syringae pv. tomato T1]
 gi|298160577|gb|EFI01599.1| high-affinity branched-chain amino acid transport system permease
           protein [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|330865919|gb|EGH00628.1| high-affinity branched-chain amino acid ABC transporter permease
           BraD [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330963369|gb|EGH63629.1| high-affinity branched-chain amino acid ABC transporter permease
           BraD [Pseudomonas syringae pv. actinidiae str. M302091]
 gi|331009786|gb|EGH89842.1| high-affinity branched-chain amino acid ABC transporter permease
           BraD [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|331014636|gb|EGH94692.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraD [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 304

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 86/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P 
Sbjct: 9   MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGLESFPF 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+      F   S FV       ++L+        +   ++ T +    R  + ++K
Sbjct: 129 GVPTLLEGAWRFEIGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL        G+    +  +  F               L L+++ R   
Sbjct: 248 GSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFG-------------LLVLILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|71734000|ref|YP_272891.1| high-affinity branched-chain amino acid ABC transporter permease
           BraD [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71554553|gb|AAZ33764.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraD [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 304

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 86/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P 
Sbjct: 9   MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGLDSFPF 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+      F   S FV       ++L+        +   ++ T +    R  + ++K
Sbjct: 129 GVPTLLEGAWRFEIGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL        G+    +  +  F               L L+++ R   
Sbjct: 248 GSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFG-------------LLVLILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|213691650|ref|YP_002322236.1| inner-membrane translocator [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|213523111|gb|ACJ51858.1| inner-membrane translocator [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|320457739|dbj|BAJ68360.1| putative ABC transporter permease component [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 604

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 67/322 (20%), Positives = 133/322 (41%), Gaps = 29/322 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
               + L         Y+  +G Q+ IY + A GL+++ GS G   L     +A+GAY+ 
Sbjct: 311 LIGAVALVSTPFFFNDYLSGVGTQVAIYAIAAVGLTLISGSAGQTILGMAGPFAVGAYAS 370

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            IL ++      + +P + +I+     ++  P  +F G Y+AIAT+ +  +   I+   +
Sbjct: 371 AILATQAHWPFLVALPAAGVIAALVASVLTFPVWRFSGHYVAIATIGVGAVMVAIIRLAE 430

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
           P+T G  GI         G T+ +                  Y + + +  ++  I++ +
Sbjct: 431 PLTKGSLGIQGIPFPKVFGVTLYTQQMM--------------YLLDVIVLLVTLVIVMRI 476

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
           R   +   +  +  +++A  +L+      K  A+A+++ F G+AG+  A     I P +F
Sbjct: 477 RTAHLGRVFEAVGSDREASEALSIRTGAYKALAYALAAFFAGLAGSLLAHQYTYIDPTIF 536

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             + +I++++I++LGGM S       + +LIG  EL    +               +   
Sbjct: 537 NSNMSILILTIIVLGGMNSPLGAVLGSIVLIGAPELLRFASDARILLYGVLLVLVIL--- 593

Query: 322 TLMVIALFLVILMRSHSLLRLR 343
                        R   L   +
Sbjct: 594 ------------FRPQGLFARK 603



 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 96/302 (31%), Gaps = 25/302 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I    Y + A G+S++ G   + +       A+G      LGS +G  I        ++
Sbjct: 9   LIHGSAYALVAVGMSLIFGVTNVANFAQGSIVAVGMMIAWWLGSSWGWGIVPTFVAVLVV 68

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +   G+IM +  +        IA L+ +     +L     +  G                
Sbjct: 69  TALLGLIMNVAIIAPLEGRKPIAALLATIGVGQVLDNGLQVVFGPQ-----------TRP 117

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
              L++ +    + V +      ++         +  +L+      A R    + +A   
Sbjct: 118 FPKLLQTYNLQVAGVRFGTSDIVMVTLAVLSMLGLWAFLKFGKAGQAIRATSQDPEAAMQ 177

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +   +  +F + +   G++G F       I+  M   +  +       +GG+ S+ 
Sbjct: 178 MGIPVKAIRNLSFVIGAVLAGVSGIFVGLFNGNIN-PMNGGTIGMTAFVAATIGGLGSIP 236

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                            G                +  H  +   AL ++++++   LL  
Sbjct: 237 GA-------------VVGGLVLGVVEAFGISLFGDGAHDLITFGALIIILIVKPQGLLGP 283

Query: 343 RT 344
           +T
Sbjct: 284 KT 285


>gi|299134112|ref|ZP_07027305.1| inner-membrane translocator [Afipia sp. 1NLS2]
 gi|298590859|gb|EFI51061.1| inner-membrane translocator [Afipia sp. 1NLS2]
          Length = 326

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/331 (19%), Positives = 129/331 (38%), Gaps = 25/331 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++A    LL   +        +  S+  +ILI+ +FA   +++ G +GLLS    + +  
Sbjct: 1   MVAFAAFLLTVPWTIPALINSFWVSVIAEILIWSLFAASANLLFGYVGLLSFGQALFFGF 60

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G Y   I   + GLS W    +    S A  ++ G+ +++    Y AI T++ S IF  +
Sbjct: 61  GMYGVAIGIDQLGLSFWPAFGLGIAASMAMALVAGVFAVRLTWHYFAIITVVFSLIFYFL 120

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            +  K +T G  GI  +    F                  +    F YY +L    +   
Sbjct: 121 AVSMKWLTGGDDGINFSLPPTFSL----------GSAQWSLADANFQYYFILATVAVCFL 170

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++  +  +++  A+  +R+N      +   +   +L+AF ++    G++G  FA      
Sbjct: 171 LMRLVIGSSLGKAFLAVRENDVRASLIGLNVYLIRLTAFVMAGFLAGVSGVLFAFFGRYA 230

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           S     +  +   +   I+GG  +L      T + I + E+      +            
Sbjct: 231 SATYMFYHVSGEGLVWAIVGGAGTLFGPVIGTTVFIIIREVVSSHWEH------------ 278

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
              H+ ++ +   LV++     L+ L   + 
Sbjct: 279 ---HSLIVGVLAILVVIFAPKGLVGLWRETV 306


>gi|316934564|ref|YP_004109546.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315602278|gb|ADU44813.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 323

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 114/326 (34%), Gaps = 32/326 (9%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++A     ++   +  T    +     +Q L + + A   ++++G  GLLS    +    
Sbjct: 21  MIAFGIMTVVLAVVPFTGVYPFFV---MQGLCFALLACAFNLLIGYGGLLSFGHAMFLGT 77

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
             Y        +GL   L I V    S    ++ GL +++ +G Y A+ TL +S++   I
Sbjct: 78  AGYVSGHALKVWGLPPELAIVVGTGASFCLAVVTGLIAIRRQGIYFAMITLALSQLLYFI 137

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            ++                       ++ + +   F    +     +Y+V+L    L   
Sbjct: 138 YLQA--------------PFTHGEDGIQGIPQGKLFGFIDLSNATTLYFVVLAGFLLGFL 183

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           II     +      + IR+N+    SL       KL AF +S    G AG+         
Sbjct: 184 IIYRAINSPFGEVLKAIRENEPRAISLGYKTDQYKLLAFILSGTLAGFAGSLKVFVAQNA 243

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           S     ++ +  ++ + ++GG+ ++        ++I + +   G                
Sbjct: 244 SLTDVHWTMSGEIVLMTLVGGLGTIFGPVVGAFVIIAMQQYLAGF--------------- 288

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
               T +  +     +L     ++  
Sbjct: 289 GQWVTVIQGVIFVACVLTFRRGIVGE 314


>gi|146338136|ref|YP_001203184.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. ORS278]
 gi|146190942|emb|CAL74947.1| Putative branched-chain amino acid ABC transporter (permease
           protein) [Bradyrhizobium sp. ORS278]
          Length = 387

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 51/360 (14%), Positives = 106/360 (29%), Gaps = 38/360 (10%)

Query: 8   LNKYDKILCLLAVVYPLL------LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           L++   I  L+     +L      L     A +   Y+ ++  + + Y + A  + ++ G
Sbjct: 10  LDRGASIFLLIVAACGILIPLSNLLLPAGSALQVPTYLVALWGKYVCYAILALSIDLIWG 69

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G+LSL     +A+G Y+  +   R   +  +                 LP      D 
Sbjct: 70  YCGILSLGHGAFFALGGYAMGMYLMRQIGTRGVYGNPILPDFMVFLNYSKLPWYWHGFDM 129

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162
              A L++  +   +   +  +                          +  D  +     
Sbjct: 130 FWFAALMVLLVPGLLAFCFGWLAFRSRVTGVYLSIITQAMTYALLLAFFRNDFGFGGNNG 189

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +        F          ++ +      L+  I   +  + +      IRD +     
Sbjct: 190 LTDFKDILGFNVQADGTRAALFALSCLALILAFLICRAVVSSKLGKVLIAIRDAESRTRF 249

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   +   KL  F +S+   G+AGA +      I+P  F    +I  +  V +GG  +L 
Sbjct: 250 LGYRVESYKLFVFTLSACMAGVAGALYVPQVGIINPSEFAPGNSIEAVIWVAVGGRGTLV 309

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             A    ++                               ++     +V L+    +L  
Sbjct: 310 GAALGAVVVNYAKTFFTS-------------GVLAPYWLFMLGALFVMVTLLLPKGILGT 356


>gi|313109853|ref|ZP_07795787.1| LOW QUALITY PROTEIN: putative permease of ABC transporter
           [Pseudomonas aeruginosa 39016]
 gi|310882289|gb|EFQ40883.1| LOW QUALITY PROTEIN: putative permease of ABC transporter
           [Pseudomonas aeruginosa 39016]
          Length = 359

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 90/304 (29%), Gaps = 13/304 (4%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS- 86
               A     Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +    
Sbjct: 39  PADSALHLSAYSLTLTGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMR 98

Query: 87  ---------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
                          W  +P   + +      + L  L       A          + + 
Sbjct: 99  QASGDSLPAFMTFLSWNELPWYWVGTQHFLWALCLVVLVPGALAFAFGYFAFRSRIRGVY 158

Query: 138 IKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                     AG+ +  R    +              FP +       ++   + +   S
Sbjct: 159 FSIMTQALTFAGMLLFFRNETGFGGNNGFTDFRSILGFPITAPGTRAALFLATVALLAAS 218

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L R+        +RD +             KL  + +S+   G+AGA F     
Sbjct: 219 LLLGWRLARSKFGRVLTALRDAENRLMFCGYDPRGYKLFVWTLSAVLCGLAGALFVPQVG 278

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            I+P     + +I     V LGG  +L        ++ G           Y+   L    
Sbjct: 279 IINPSEMSPTNSIEAAVWVALGGRGTLLGPLLGAGVVNGAKSWFTVAFPEYWLFFLGALF 338

Query: 315 SFNM 318
               
Sbjct: 339 IVVT 342


>gi|284041902|ref|YP_003392242.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283946123|gb|ADB48867.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 320

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 74/341 (21%), Positives = 133/341 (39%), Gaps = 28/341 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           MS   L L+       L      LLL   +       Y  S    + IY     GL+++ 
Sbjct: 1   MSALRLHLSTPRGRALLRFAPAALLLVALVAPFALAPYQVSQLTTVWIYATAVLGLNLLT 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G +S      +AIGAY+  IL  R  L   L +P  A+++   G+ +GLP+L+ RG 
Sbjct: 61  GHTGQISAAQGGFFAIGAYTAAILLDRGLLPPLLTLPAGALVALLAGVALGLPALRLRGL 120

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ TL ++ +   +  +   +T G  G+              ++        S +  +
Sbjct: 121 YLALVTLAVAVVVPVVAKRADGLTGGAGGM--------------TVDTLAAPTWSGLADD 166

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
            ++Y V + +      + + + R A   A   +RD +     +   I   KL AF VS+A
Sbjct: 167 QYLYLVAVALAVAGFGLAVRMTRGASGRALTAVRDGEVTAAVVGVNIARVKLQAFGVSAA 226

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           + G AGA +  +   ++P+ F        ++ +I+GG  +L         +  V      
Sbjct: 227 YAGAAGALYTLAVGFVAPESFTLLLAFAFLTAMIVGGARTLVGALVGALFIEYVPATAAD 286

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           ++                    +   AL L + +    ++ 
Sbjct: 287 VDPSLTG--------------VVYGAALLLCVYLLPAGIVG 313


>gi|110834844|ref|YP_693703.1| branched-chain amino acid ABC transporter permease [Alcanivorax
           borkumensis SK2]
 gi|110647955|emb|CAL17431.1| branched-chain amino acid ABC transporter,permease protein
           [Alcanivorax borkumensis SK2]
          Length = 380

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/329 (15%), Positives = 91/329 (27%), Gaps = 36/329 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL----------- 84
             +  +M  + L Y   A GL +  G  G+LSL   I + +G Y   +            
Sbjct: 34  DAFRLNMVGKYLTYAFAALGLVLCWGRSGILSLGQGIFFGLGGYCMAMFLKLEASSPENT 93

Query: 85  -GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
                      +                  S          A L +         +   +
Sbjct: 94  SIQSTPGIPDFMDWNQLTALPWFWEPFHSFSFTLIAVVAVPAILALIIGVAMFKRRVGGV 153

Query: 144 TNGKAGIYVA----------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
                   +A                   +  L     +       +  +Y+V +GM FL
Sbjct: 154 YFAIITQAIAAILTILIIGQQGFTGGVNGITDLRTLMGWDIRSDEAKTALYFVCVGMLFL 213

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              I  W+  + +      +RD +         +   K+  F +++ F G+ GA F    
Sbjct: 214 CLMIGRWVMHSKLGRILLAMRDQEDRVRFSGYDVASFKIFVFCLAAMFAGVGGAMFTLQV 273

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             +SP       +I ++ +  +GG  SL        I+                +   F 
Sbjct: 274 GFMSPTFVGIVPSIEMVVLCAVGGRNSLLGAVYGALIV--------------NAAKTGFS 319

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            SF       M      V+L     L  L
Sbjct: 320 ESFPELWLYAMGALFIGVVLAFPDGLAGL 348


>gi|34763792|ref|ZP_00144706.1| Branched-chain amino acid transport system permease protein livH
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
 gi|237742528|ref|ZP_04573009.1| branched-chain amino acid transport system permease livH
           [Fusobacterium sp. 4_1_13]
 gi|27886430|gb|EAA23691.1| Branched-chain amino acid transport system permease protein livH
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
 gi|229430176|gb|EEO40388.1| branched-chain amino acid transport system permease livH
           [Fusobacterium sp. 4_1_13]
          Length = 299

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 91/306 (29%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL---GSRYGLSIWLL 95
           I +      IY + + G ++V G   L++        IGAY+ +      +  GL IW  
Sbjct: 11  IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYTSLFSIPLFTSLGLPIWAT 70

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  + ++    G +    + +   +   I+ LI +      L                  
Sbjct: 71  VIPAIIVCAVIGCLAERIAYRPLRNSPRISNLITAIGVSLFLENVFMKVFTPNTRSFPKI 130

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                 +  + I                   ++    LS  + L++++T    A      
Sbjct: 131 FDQAPISFGANIH----------ISFGAIVTIVITLVLSIGLQLFMKKTKYGKAMIATSQ 180

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   +   +       FA+ S    +    + ++  +I P M      I      +L
Sbjct: 181 DYAASELVGINVDKTIQLTFAIGSGLAAVGSVLYVSAYPQIQPLM-GSMLGIKAFVAAVL 239

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  L        IL  V  L              F               L +V+L +
Sbjct: 240 GGIGILPGAVLGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIVVLLFK 286

Query: 336 SHSLLR 341
              +L 
Sbjct: 287 PTGILG 292


>gi|293397103|ref|ZP_06641377.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Serratia odorifera DSM
           4582]
 gi|291420574|gb|EFE93829.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Serratia odorifera DSM
           4582]
          Length = 357

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 95/336 (28%), Gaps = 27/336 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L L           Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  
Sbjct: 33  FLALLPAEHPLAISTYTLTLVGKILCYAVVAVALDLVWGYAGLLSLGHGLFFALGGYAMG 92

Query: 83  IL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
           +               S    S                 ++ L        +   A    
Sbjct: 93  MYLMRQAAGDGLPAFMSFLSWSELPWFWSGTQYFAWALCLIVLVPGGLAWLFGYFAFRSK 152

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            +     ++       G    +  +  +              F  +     + ++   + 
Sbjct: 153 IKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFSITATGTRVALFLATVL 212

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   S ++   L R+        +RD +             KL  + +S+   G+AGA +
Sbjct: 213 LLVASLALGFALARSKFGRVLTAVRDAENRLMFCGYDPKGFKLFVWTLSAVLCGLAGALY 272

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                 I+P     + +I     V  GG  +L        I+ G                
Sbjct: 273 VPQVGIINPSEMSPTNSIEAAIWVAFGGRGTLVGPLLGAGIVNGAKSW------------ 320

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
             F  +        + +   LV L     ++ L   
Sbjct: 321 --FTMAIPEYWQLFLGLMFILVTLFLPRGVMGLLRR 354


>gi|295680881|ref|YP_003609455.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295440776|gb|ADG19944.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 329

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 113/297 (38%), Gaps = 12/297 (4%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            +     LG          +  ++ I  +FA  L +++G  G++SL     + +GAYS  
Sbjct: 25  IIFWIAALGVCVMPLNNYLLLNEMAILALFAVSLDLILGYAGIVSLGHAAFFGLGAYSAA 84

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +L   + +   L + +S  ++   G++  +  ++       + TL ++ I   +  K   
Sbjct: 85  LLAKYFNVDPLLGMLLSCGVAALAGLVTSVLVMRGSDLTRLMVTLGVASILHELANKLGW 144

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+     +   G               F ++    Y   +   F+   I   + 
Sbjct: 145 LTGGADGMTGVPMVPLFG------------HIEFDLFGKVAYTYSVVTLFVLFVIGRAVV 192

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           ++    + + IR N     ++   +   + + + +S+A+ G+AGA  A +    S D+  
Sbjct: 193 KSPFGMSLQVIRQNPLRAAAMGVPVNLRRTAVYTLSAAYAGVAGALLAQTTGFASLDVLD 252

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           F  +  V+ ++++GG   L        +   + +    +   Y+   +       + 
Sbjct: 253 FHRSADVLLMLMIGGAGYLYGGIIGAVVFRFMQDRLADITPQYWQFWIGLLLVIIVI 309


>gi|239623758|ref|ZP_04666789.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521789|gb|EEQ61655.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 293

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 97/307 (31%), Gaps = 23/307 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      +Y + A G ++V G   +L+        IG+Y   +  S  G    + I
Sbjct: 5   NYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGSYVVFVTVSTMGFPPLVGI 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V+ +     GM +   + K       +A LI +     +L     +  G         +
Sbjct: 65  LVAVLACTLLGMTIERIAYKPLRGASPLAVLITAIGVSYLLQNVALLIFGADTKSFTSVV 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +             +         +L    +   +  ++ ++    A   + ++
Sbjct: 125 TIPAIKLAD---------GQMTITGETIVTILTCIIIMLGLTTFINKSKAGQAMLAVSED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ SA   +AG    ++   ++P        I      + G
Sbjct: 176 RGAATLMGINVNGTIALTFAIGSALAAIAGVLLCSAYPSLTPYT-GSMPGIKAFVAAVFG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        +L  +  L         +  + F               L +V+L++ 
Sbjct: 235 GIGSIPGAFIGGILLGVIEILSKAYISSQMSDAIVFS-------------VLIIVLLVKP 281

Query: 337 HSLLRLR 343
             +L  +
Sbjct: 282 TGILGKK 288


>gi|149926226|ref|ZP_01914488.1| putative amino-acid transmembrane abc transporter protein
           [Limnobacter sp. MED105]
 gi|149825044|gb|EDM84256.1| putative amino-acid transmembrane abc transporter protein
           [Limnobacter sp. MED105]
          Length = 321

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/315 (15%), Positives = 98/315 (31%), Gaps = 16/315 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---------G 89
           + +  +   IY + A G ++V G LGL++        IGA       + +          
Sbjct: 8   LINGLVLGSIYALVALGYTMVYGVLGLINFAHGEVVMIGAMVAFSAITLFLGLFPETPGW 67

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +   + +  +  +       +   + +   +   +A LI +     IL     I  G+  
Sbjct: 68  MLFLVGVLCAVPVCMLVSFSIERFAYRPLRNAPRLAPLISAIGVSIILQTLAMIIWGRNY 127

Query: 150 IYVAD-RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           +                           V        +++    L   +   + +T +  
Sbjct: 128 LIFPATLPTDPIVLHTFAPSLESDYERIVSITPVQLLIVVVSAALMFGLTYTVNKTRLGK 187

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           A R   +N +    +         + F + +A  G+AG   AA+   ++     F   + 
Sbjct: 188 AMRATSENPQLAGLMGINANSVIAATFVIGAALAGVAGVMVAANY-SVAHFYMGFLPGLK 246

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
             +  +LGG+ ++        +L  V  L  G         L      +          L
Sbjct: 247 AFTAAVLGGIGNIYGAMLGGLLLGIVESLGAGYLGQLTGGFLG-----SHYQDIFAFAVL 301

Query: 329 FLVILMRSHSLLRLR 343
            LV+ +R   LL  R
Sbjct: 302 ILVLTLRPSGLLGER 316


>gi|157413251|ref|YP_001484117.1| putative membrane protein of urea ABC transport system
           [Prochlorococcus marinus str. MIT 9215]
 gi|157387826|gb|ABV50531.1| putative membrane protein of urea ABC transport system
           [Prochlorococcus marinus str. MIT 9215]
          Length = 376

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/343 (13%), Positives = 96/343 (27%), Gaps = 31/343 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +L+    L+  +    T    +  ++  + L   + A G+ ++ G  GLLSL   I +A
Sbjct: 12  IILSFWIILIALVIAAPTLLPVFRLNLLGRYLSLSIVALGVDLIWGYTGLLSLGQGIFFA 71

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +G Y   +       S +               +           Y   A  I+  +   
Sbjct: 72  LGGYCAAMYLQITSSSEFPNNIPEFFALYGVEKLPFFWEPFRSPVYTFFAIWIIPALVAG 131

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTV-----------------RSLIRFFRFPSSFVI 178
           ++         K   +       L                       + + F        
Sbjct: 132 LIGFLVFRNRIKGVYFSILTQASLLVFFNFFNGQQKLINGTNGLKTDVTQLFGQMVGSES 191

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
            +   +++   +   +     WL +    N    IRD++          +  K   F+++
Sbjct: 192 MQRIFFWITAILVIAAWFFAKWLVKGRFGNILIGIRDDEPRVRFTGYNPVIFKTIIFSIA 251

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
               G++GA +      +SP       +I ++  V +GG  +L         +     L 
Sbjct: 252 GGLAGISGALYTVQSGIVSPQFMTVPFSIEMVIWVAVGGRGTLLGAILGAVFINYAKSLV 311

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                           +       +      LV+      +L 
Sbjct: 312 SE--------------ALPASWMFIQGGLFILVVTSLPEGVLG 340


>gi|145589382|ref|YP_001155979.1| inner-membrane translocator [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047788|gb|ABP34415.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 380

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 99/344 (28%), Gaps = 32/344 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L+ V    L+           Y  S+  +I+ + + A  L +V G  G+LSL   + +A
Sbjct: 38  VLIGVPIFSLVVPETSMFFMSAYALSLIGKIMCFAIAALALDLVWGYCGILSLGHGLFFA 97

Query: 76  IGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           IG Y   +                                  +   G   +++ L     
Sbjct: 98  IGGYIMGMYLMRQIGTEGVYKSELPDFMVFLDWKELPWFWKGSEHFGWMLLMLILVPGVI 157

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
              +   A     +     +I            +  +  +          R   +  S  
Sbjct: 158 SWVFGYFAFRSRIKGVYFSIITQALTYAAMLLFFRNETGFGGNNGFTDFKRILGYSISAP 217

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
              + ++ V   +   S  +   L  + +      +RD +          +  KL  + +
Sbjct: 218 STRVTLFIVTFLVLLGSFILCRALVTSKMGRVITAVRDAESRLMFCGYNPLGYKLFIWVL 277

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           S+    +AGA F      I+P     + +I +   V +GG  +L         + G    
Sbjct: 278 SAILCAIAGALFVPQVGIINPGEMSPTNSIEMAIWVAVGGRGTLLGPIIGAFAVSGAKSF 337

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                         F  +F       + +   LV L   + LL 
Sbjct: 338 --------------FTTNFAEYWLFFLGMMFVLVTLFLPNGLLG 367


>gi|328957956|ref|YP_004375342.1| high-affinity branched-chain amino acid transport system permease
           protein [Carnobacterium sp. 17-4]
 gi|328674280|gb|AEB30326.1| high-affinity branched-chain amino acid transport system permease
           protein [Carnobacterium sp. 17-4]
          Length = 292

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 93/289 (32%), Gaps = 12/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GA+      + + LS    + V
Sbjct: 8   LINGLSLGSIYALIALGYTMVYGIIKLINFAHGDIYMVGAFVGYTAINSFNLSFLPALIV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +     G+++   + K   +   +A LI +     +L        G            
Sbjct: 68  SMIFCAVLGVLIERIAYKPLRNATRVAALITAIGMSYLLQNGMIYLVGSE---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I    +  + +        +      L  ++ L +++T +  A R +  +  
Sbjct: 118 -TRAFPQVIENKVYEFAGLQVSQTQIMIFSTTIILMLALQLIVQKTKMGKAMRAVSTDAD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S+  G AG       + I   M  ++  +      +LGG+
Sbjct: 177 AARLMGINVDNVISFTFALGSSLAGAAGVLVGLYYNSIE-PMMGYAPGLKAFIAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +         +  +  L  G         + +     +       + 
Sbjct: 236 GIIPGAMFGGFTIGIIETLVSGYGGSMIKDAVVYLILIIILIFKPSGLL 284


>gi|294784953|ref|ZP_06750241.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Fusobacterium sp. 3_1_27]
 gi|294486667|gb|EFG34029.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Fusobacterium sp. 3_1_27]
          Length = 299

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 91/306 (29%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL---GSRYGLSIWLL 95
           I +      IY + + G ++V G   L++        IGAY+ +      +  GL IW  
Sbjct: 11  IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYTSLFSIPLFTSLGLPIWAT 70

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  + ++    G +    + +   +   I+ LI +      L                  
Sbjct: 71  VIPAIIVCAVIGCLAERIAYRPLRNSPRISNLITAIGVSLFLENIFMKVFTPNTRSFPKI 130

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                 +  + I                   ++    LS  + L++++T    A      
Sbjct: 131 FDQAPISFGANIH----------ISFGAIVTIVITLVLSIGLQLFMKKTKYGKAMIATSQ 180

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   +   +       FA+ S    +    + ++  +I P M      I      +L
Sbjct: 181 DYAASELVGINVDKTIQLTFAIGSGLAAVGSVLYVSAYPQIQPLM-GSMLGIKAFVAAVL 239

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  L        IL  V  L              F               L +V+L +
Sbjct: 240 GGIGILPGAVLGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIVVLLFK 286

Query: 336 SHSLLR 341
              +L 
Sbjct: 287 PTGILG 292


>gi|260584960|ref|ZP_05852704.1| hydrophobic amino acid uptake (HAAT) family ABC transporter
           permease LivH [Granulicatella elegans ATCC 700633]
 gi|260157390|gb|EEW92462.1| hydrophobic amino acid uptake (HAAT) family ABC transporter
           permease LivH [Granulicatella elegans ATCC 700633]
          Length = 293

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 97/288 (33%), Gaps = 11/288 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G++ L++      Y +GA+      +  GL+I+L + +
Sbjct: 8   LVNGVALGSIYALVALGYTMVYGTIKLINFAHGDVYMMGAFVGFYAMNGLGLNIFLSLLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+++   + K       +A LI +     +L        G            
Sbjct: 68  AMVSCAVLGVVIERVAYKPLRRSTRVAALITAIGVSFLLENVMSYLFGAEIRPFPSDFGT 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+   +                  +      L A +   +  T +  A R +  ++ 
Sbjct: 128 TNYTLFGNVTINGKQI----------LIFATTVILMALLQFIVHYTKMGKAMRAVAVDED 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S+  G+AG   A   +  S  M      +      +LGG+
Sbjct: 178 AAQLMGIDVDQVISFTFALGSSLAGIAGVLVALYYNTYSATM-GIVPGLKAFVAAVLGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            S+        ++  +  L   + F  +   + +   F +       +
Sbjct: 237 GSIPGAMIGGYVIGLLETLVSYLGFSPYKDGVVYFLLFVILLVLPAGL 284


>gi|254466118|ref|ZP_05079529.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium Y4I]
 gi|206687026|gb|EDZ47508.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium Y4I]
          Length = 352

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 55/342 (16%), Positives = 128/342 (37%), Gaps = 13/342 (3%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           +K    +    ++  L+                   +I I+++      +++G  G++S 
Sbjct: 9   DKPRSAVLTAVLLVILICLAGAPFIFDGVRPLDTAARICIFILLVASYDLLLGYGGIVSF 68

Query: 69  NCVIAYAIGAYSYVILGSRYGLSI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
              + + +GAY   +  +  G             A  +    +++GL SL+ R  + A+ 
Sbjct: 69  AHTMFFGLGAYGVALASTHMGRGFDALLAGSLAGAAAAVVLALLIGLFSLRVRAIFFAMI 128

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL ++     ++ ++  IT G+ G+            + S  R   F  + +  +   YY
Sbjct: 129 TLAVASAVAVLVSQFSGITGGEDGLTYNIP-----RVLTSANRMGEFLGTRITGKTLNYY 183

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++     +   ++L +  +      + IR+N     ++   +++ +  A  +S+A   +A
Sbjct: 184 LVFFASLILFLLLLRIVNSPFGRVLQAIRENDFRAEAIGYRVVWYRTVATCLSAAAAALA 243

Query: 246 GAFFAASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIG----VVELCCG 300
           G+ FA     + PD    F   + ++ +V++GGM ++       A+ I     +  L   
Sbjct: 244 GSLFAIWLRYVGPDTTLSFEIMLDILLMVVIGGMGTMYGAVVGAALFILAQTYLQNLMGS 303

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +       L  D     R    + I   L +      ++  
Sbjct: 304 ASEATAGLPLIPDLLNPDRWLMWLGILFILSVYFFPSGIVGR 345


>gi|87120385|ref|ZP_01076280.1| inner-membrane translocator [Marinomonas sp. MED121]
 gi|86164488|gb|EAQ65758.1| inner-membrane translocator [Marinomonas sp. MED121]
          Length = 303

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 88/303 (29%), Gaps = 14/303 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y + AY   I+ +          P+
Sbjct: 8   LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMVSAYITAIVVALLSFFGIESFPI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    + +                     +   I      +               
Sbjct: 68  IIIGTLFITIAVTGAYGWAIEQIAYRPLRNSGRLSALISAIGMSLILQNYVQISQGARQQ 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+ +    F     FV        +LL       ++   ++RT +    R  + ++K
Sbjct: 128 GIPTMLTGAVRFDVGDGFVQITYMKLVILLVAFLGMGTLTYIIQRTKLGRMCRATQQDRK 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + ++   +AG             +  F   I   +  +LGG+
Sbjct: 188 MASILGINTDRVISIVFVIGASMAALAGVLITLDYGAFDFYV-GFIIGIKAFTAAVLGGI 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL     L  G+    +  +  F               L ++++ R   
Sbjct: 247 GSLPGAMLGGIILGVSESLFAGLISSDYKDVFSFS-------------LLVIILIFRPSG 293

Query: 339 LLR 341
           LL 
Sbjct: 294 LLG 296


>gi|317133263|ref|YP_004092577.1| inner-membrane translocator [Ethanoligenens harbinense YUAN-3]
 gi|315471242|gb|ADU27846.1| inner-membrane translocator [Ethanoligenens harbinense YUAN-3]
          Length = 361

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 51/325 (15%), Positives = 107/325 (32%), Gaps = 9/325 (2%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             LL+FL +    ++++   M  + L   +FA  L ++ G  GLLSL   + + IG Y  
Sbjct: 20  IGLLVFLAVFPLFAEEFRVEMMGRYLCLAIFALSLDLLWGYGGLLSLGHAVFFGIGGYMI 79

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPS----LKFRGDYLAIATLIMSEIFQNIL 137
            +           +      +     + +  P     +      L  A L        I 
Sbjct: 80  GLCYQIQFGLPAFMTREKITVLPWFYLPLKNPIVAALIGIGLAALISAILGFFVFSSKIK 139

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF-----PSSFVIYEIFMYYVLLGMCF 192
             +  I         +  +                          + +I  YYV+L +  
Sbjct: 140 GVFFTIITLALAQMFSQFIITEQKYTNGFNGLQSIKRFAMNHGQPLDKIEYYYVILVVAA 199

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L     +WL R  +     +IR+N++       T    K+    ++ A  G++G  +A +
Sbjct: 200 LVFLFCMWLTRNRVGKIAVSIRENEQRLGFFGYTASHYKILIMTIAGAIAGLSGVLYAPA 259

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              I+      + + +V+  + +GG  +L+     T  +     L       ++  +L  
Sbjct: 260 TGSITVQDIGIAASTLVVVWIAVGGRGNLTGAVVGTLFINWAQSLLSDQFSSFWQLILGI 319

Query: 313 DCSFNMRHTTLMVIALFLVILMRSH 337
                +      ++   + +  R  
Sbjct: 320 VLILIIFFMPNGIVGKIISLQQRRR 344


>gi|283852731|ref|ZP_06369996.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
 gi|283571909|gb|EFC19904.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
          Length = 359

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 55/328 (16%), Positives = 108/328 (32%), Gaps = 10/328 (3%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 Y  S+ + + I ++ +  L+I+ G++G  S       A+GAY   +L       
Sbjct: 23  TGVLNVYWQSVIMFMGINIILSSSLNIINGNMGEFSCGHAGFMAVGAYVSSVLSVALFTK 82

Query: 92  ---IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
                  +    +      +I+   +L      L +A          + I          
Sbjct: 83  SAAFGGPLLPPDLAVWLFPVILLAGALAASVVGLLVAIPSFKTRGDYLAIITIAAAYIVK 142

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                  +         +       ++       M +V +G  F    +I     +    
Sbjct: 143 STIENIGIIGGARGFMGMGGVMSAMTATADLPWIMIWVFVGTVFS-VWLIRRFIYSTFGK 201

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  ++ A   ++      KL AF VS    G+AG  FA     ++P  F   ++  
Sbjct: 202 GVDAIAQDEIAAEIMSVNTNHVKLVAFMVSCGLAGLAGGLFAHILGYVNPGTFTILKSTE 261

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF------NMRHTT 322
           ++ +V LGGM SLS    A  ++  ++E       +  + L              +    
Sbjct: 262 IMVMVYLGGMGSLSGSVLAAILMTLLIEYLRDAFGFINSFLHFVSVIPDSYEVTQVWKWV 321

Query: 323 LMVIALFLVILMRSHSLLRLRTPSNFLE 350
           L+ + L L++  R   ++  R  S+   
Sbjct: 322 LIPLLLVLLMQFRPEGIMGRRELSDVFP 349


>gi|86158848|ref|YP_465633.1| chain amino acid ABC transporter inner membrane subunit
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775359|gb|ABC82196.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 368

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 67/352 (19%), Positives = 146/352 (41%), Gaps = 19/352 (5%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
             R  +   ++ LL  V  +           + Y+  MG+ + + V+     ++V G  G
Sbjct: 10  PSRAPRGYSVVGLLVFVAAVAALAIFPQFVKKPYVLHMGVLLFLAVIQGQAWNVVGGYAG 69

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
             S+     + +GAY  ++L     ++ W  +  +   S    +++G  + + RG Y  +
Sbjct: 70  QYSVGHAAYFGVGAYVTMMLLEVNKIAPWWGVWAAMAASVLLSLVIGSITFRLRGPYFVL 129

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           A++ ++EI +   + +K +T G  G  + +                       I +   Y
Sbjct: 130 ASISVAEIIRLATLYFKDLTRGAEGFLLGEIPTMNLL----------GNEILFIGKRPFY 179

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           +V LG+  ++ ++   ++ + +   ++ IR++Q A  SL   + F K  A ++S+A   +
Sbjct: 180 FVGLGLAVVAVAVNWVVQHSKLGYYFQAIREDQDAAHSLGINLSFYKNVALSISAALTAL 239

Query: 245 AGAFFAASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           AG F+A     I P+  F    ++ ++ + I+GG+ ++        +L+ + E+      
Sbjct: 240 AGGFYAMFVKFIDPNTVFGLDVSVQIVLLCIIGGIGTIIGPVIGAVVLVPLSEILRNPKG 299

Query: 304 YYFNSLLKFDCSF--------NMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                +L  D  F        +  H  +  I + LVIL     +L +   + 
Sbjct: 300 LVQVGVLPPDSGFVTFVERYLSNAHLLVYGILVVLVILFAPEGVLGVIRRAA 351


>gi|289672628|ref|ZP_06493518.1| inner-membrane translocator [Pseudomonas syringae pv. syringae FF5]
 gi|330899920|gb|EGH31339.1| inner-membrane translocator [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 304

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 86/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P 
Sbjct: 9   MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGVESFPF 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLIFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+      F   S FV       ++L+        +   ++ T +    R  + ++K
Sbjct: 129 GVPTLLEGAWRFEVGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL        G+    +  +  F               L L+++ R   
Sbjct: 248 GSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFG-------------LLVLILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|302185463|ref|ZP_07262136.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraD [Pseudomonas syringae pv. syringae 642]
 gi|330951501|gb|EGH51761.1| high-affinity branched-chain amino acid ABC transporter permease
           BraD [Pseudomonas syringae Cit 7]
          Length = 304

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 86/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P 
Sbjct: 9   MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGLESFPF 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLIFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+      F   S FV       ++L+        +   ++ T +    R  + ++K
Sbjct: 129 GVPTLLEGAWRFEVGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL        G+    +  +  F               L L+++ R   
Sbjct: 248 GSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFG-------------LLVLILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|83749555|ref|ZP_00946542.1| LivM [Ralstonia solanacearum UW551]
 gi|207722109|ref|YP_002252547.1| transmembrane protein [Ralstonia solanacearum MolK2]
 gi|83723791|gb|EAP70982.1| LivM [Ralstonia solanacearum UW551]
 gi|206587283|emb|CAQ17867.1| transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 328

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 56/298 (18%), Positives = 118/298 (39%), Gaps = 15/298 (5%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
           +L +V+FA   ++++G  GLLS      +    Y    L     L+  L +         
Sbjct: 35  VLCFVLFASAFNLLLGYTGLLSFGHAAFFGGAGYMAGYLMRDLHLTPELGLVAGTAAGAL 94

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
            G+++GL +++ +G Y A+ TL ++++F    ++    T G+ G+    R          
Sbjct: 95  IGLVVGLLAIRRQGIYFAMITLALAQMFYFFCLQAP-FTGGEDGLQGVPR---------- 143

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                 F    +  ++ +YY +L +   +  +I+    +      + I++N+    SL  
Sbjct: 144 ---GKLFGVLDLSSDLTLYYFVLVVVVAAFLVIVRTIHSPFGQILKAIKENEPRAISLGY 200

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                KL AF +S+A  G+AGA         +     ++ +  VI + ++GG+  LS   
Sbjct: 201 DTDRFKLLAFVLSAALSGLAGALKTLVLGFETLTDVHWAMSGSVILMTLVGGLGILSGPI 260

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCS-FNMRHTTLMVIALFLVILMRSHSLLRL 342
              A++I +      +  +          +      TT+      + +L     ++  
Sbjct: 261 LGAALVIALENKLGDIGTFLAGVTGVDGFNVLGESVTTVTGAIFVICVLTFRRGIMGE 318


>gi|312958718|ref|ZP_07773238.1| branched-chain amino acid ABC transporter permease protein
           [Pseudomonas fluorescens WH6]
 gi|311287261|gb|EFQ65822.1| branched-chain amino acid ABC transporter permease protein
           [Pseudomonas fluorescens WH6]
          Length = 355

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/324 (15%), Positives = 96/324 (29%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
                 Y  ++  +IL Y + A  L +V G  G+LSL   + +A+G Y+  +        
Sbjct: 43  PLHVSAYTLTLVGKILCYAIGALALDLVWGYAGMLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      + L  L      L           + +     
Sbjct: 103 SELPAFMTFLSWTELPWYWAGTDHFLWALCLVVLAPGSLALVFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  +       ++   + +   S  I 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFGITEPGTRAVLFTATVLLLVASLYIG 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G+                 F  +F  
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGVVNGMKSW--------------FTVAFPE 328

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +     +V L     ++ L
Sbjct: 329 YWLFFLGALFIIVTLYLPKGVIGL 352


>gi|171912706|ref|ZP_02928176.1| branched-chain amino acid ABC transporter, permease protein
           [Verrucomicrobium spinosum DSM 4136]
          Length = 307

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 92/307 (29%), Gaps = 10/307 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L  ++      + +GA+  + +       +  L   
Sbjct: 8   LLNGLFLGAIYALIALGYTMVYGVLRFINFAHGDVFMLGAFGGLYVHKALEPLLNSLPWP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+       +    +L    +Y A   L        ++         +    +      
Sbjct: 68  LALAVVMLASMAICAALGIAIEYFAYRPLRNRPRLNVLITAIGVSLFIEYTGQLVFGATQ 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  + R        +   +    V++    L   +   + RT +  A R +  N  
Sbjct: 128 -QPFPALIPRQNISGLGGLTVTMTQVIVVVVTTALLVGLRYIVMRTRLGLAMRALSLNPT 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +           F + SA     G  +A+    + P M      I      +LGG+
Sbjct: 187 AAALMGVNTSVVISFTFGLGSALAAAGGILYASLYPSVDPFM-GIQPGIKAFVAAVLGGI 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++   A    I+  V  L  G +              +     +  + L L++L +   
Sbjct: 246 GNIPGAALGGMIIGVVETLVTGYSQKLG--------IPSGYKEGVAFVILILILLFKPSG 297

Query: 339 LLRLRTP 345
           LL     
Sbjct: 298 LLGKVER 304


>gi|220923341|ref|YP_002498643.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219947948|gb|ACL58340.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 344

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 60/309 (19%), Positives = 109/309 (35%), Gaps = 13/309 (4%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   I  L   +  L + L L A   Q  +    I    Y + A  L+++VG  GL+S  
Sbjct: 2   RAGLIRDLAVALVSLGVLLALPALFPQPALRDFLIYFFAYGLLAMSLNLLVGLTGLVSFG 61

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
               +A GAY++ +L     +S+ L    +   +    +++G   ++ +  Y A  TL  
Sbjct: 62  HAAYFASGAYAFGLLMQSGRVSVPLAALAAIGGTALLALVIGAICVRLKEIYFAFITLAF 121

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                +I++ W  +T G  G             +R  I    F    +     +Y     
Sbjct: 122 QMFIHSIIVTWVSLTGGDQG-------------LRGGIPRPPFLGIDLNDARVLYGACAV 168

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L    +  + ++      R IRDN      L   +  AKL  F  + A   + G   
Sbjct: 169 LFVLCVLAMRQVSQSPFGYTLRMIRDNPARANFLGVNVAAAKLGIFVFAGAMASVGGLIL 228

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A       P+   ++ +   I +++LGG          T +L  +         Y+   L
Sbjct: 229 ALFVSGAYPEFAFWTTSGEAIFMIMLGGTKLFLGPLVGTLLLQTLNHYVTIYTEYHGLVL 288

Query: 310 LKFDCSFNM 318
                   +
Sbjct: 289 GTVILLIVL 297


>gi|153007251|ref|YP_001381576.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5]
 gi|152030824|gb|ABS28592.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5]
          Length = 359

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 131/353 (37%), Gaps = 56/353 (15%)

Query: 7   RLNKYDKILCLLAVVYPLLLFL-FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           RL  + + +    V  P++  L    A + +  +  + I I + V+ A  L++V G  G 
Sbjct: 6   RLRAFLRSVAPFLVGLPIVFALQAFLAAQGRDDLSFLLISIGVNVILAVSLNVVNGFTGQ 65

Query: 66  LSLNCVIAYAIGAYSYVILGSRY--------------GLSIWLLIPVSAMISGACGMIMG 111
            SL      A+GAY+   +                   +   L +    + +   G+++G
Sbjct: 66  FSLGHAGFMAVGAYTAAKITLALSDVQLAFLPGWLSDQVFFALALSAGMLTAAIAGVLVG 125

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           +PSL+ RGDYLAI TL   EI ++++   + +     G+    RL               
Sbjct: 126 MPSLRLRGDYLAIVTLGFGEIIRSVIENMRFL-GQATGLSGLPRLTN------------- 171

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                          +      +  +   L  ++   A   IR+++ A  ++       K
Sbjct: 172 ------------LTWVGAGVIATVVMARRLALSSQGRALFAIREDEVAAEAMGVDTTGYK 219

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           + AF +++A+ G+AG          +P  F F  +I V++ V+LGG+ S++    + A+L
Sbjct: 220 VRAFVIAAAYAGLAGGLIVHVLQLATPRSFTFIRSIEVVAFVVLGGLGSVTGSILSAAVL 279

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             ++E    +  Y             +                R   +   R 
Sbjct: 280 TWLLERLRDIQQYRMVGYALLLIVLMLL---------------RPQGIFGTRE 317


>gi|330984536|gb|EGH82639.1| high-affinity branched-chain amino acid ABC transporter permease
           BraD [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 304

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 86/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P 
Sbjct: 9   MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGLESFPF 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+      F   S FV       ++L+        +   ++ T +    R  + ++K
Sbjct: 129 GVPTLFEGAWRFEIGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL        G+    +  +  F               L L+++ R   
Sbjct: 248 GSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFG-------------LLVLILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|295675758|ref|YP_003604282.1| urea ABC transporter, permease protein UrtC [Burkholderia sp.
           CCGE1002]
 gi|295435601|gb|ADG14771.1| urea ABC transporter, permease protein UrtC [Burkholderia sp.
           CCGE1002]
          Length = 401

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 102/349 (29%), Gaps = 32/349 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             I+  L V +  L+     A     Y  ++  + + Y + A  L +V G  G+LSL   
Sbjct: 57  LIIVFGLGVPFAALVIPETSALHLSAYAMTLTGKFMCYAIAALALDLVWGYCGILSLGHA 116

Query: 72  IAYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLP 113
           + +A+G Y+  +                                      G   +++ L 
Sbjct: 117 LFFALGGYAIGMYLMRAIGHDGKYGSDLPDFMVFLDWHQLPWYWQGTQHLGYALLLVVLV 176

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
                  +         +     +I            Y  +  +          R   FP
Sbjct: 177 PAVVAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIGGFP 236

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
            +       +  +   +   +      +  + +      +RD +     L  + +  KL 
Sbjct: 237 ITHQGTRAALLLITFAVLIAAFIGARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLF 296

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            + VS+   G+AGA +      I+P       +I +   V +GG  +L         + G
Sbjct: 297 VWTVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIIGAFAVNG 356

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                             F  +F       + +   LV L+  + ++ L
Sbjct: 357 AKSF--------------FTANFPEYWLFFLGLIFVLVPLLLPNGIMGL 391


>gi|187927072|ref|YP_001893417.1| inner-membrane translocator [Ralstonia pickettii 12J]
 gi|241665401|ref|YP_002983760.1| inner-membrane translocator [Ralstonia pickettii 12D]
 gi|187728826|gb|ACD29990.1| inner-membrane translocator [Ralstonia pickettii 12J]
 gi|240867428|gb|ACS65088.1| inner-membrane translocator [Ralstonia pickettii 12D]
          Length = 322

 Score = 85.7 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 115/302 (38%), Gaps = 33/302 (10%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++  ++L+Y M     ++++G  GLLS    I + +G+Y+  I  ++  L + + + ++ 
Sbjct: 32  TLATEVLVYAMAVMACNLLLGYTGLLSFGQGIFFGLGSYAVGIGLTQLALPMPVALVLAV 91

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           ++      ++G  +++ RG Y  + TL  S++F  +      +T G  G+    R     
Sbjct: 92  VVGAIVAAVVGWFAIRQRGTYFVMLTLAFSQMFYFLAYTTPSLTGGDNGLLDIPRP---- 147

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                         +F       Y  +  +  +   ++  +  +        IRDN++  
Sbjct: 148 --------------AFAASPWAFYAFVAVLFLVVFFLVQRVTESVFGRTLLAIRDNEERA 193

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++   +   KL AF +S A  G+AGA  A            +  + +++ + ++GG  +
Sbjct: 194 LAVGYNVRAFKLLAFVISGAVTGLAGALHAMLTGIAPLANIDYHVSEMILVMTVIGGTGN 253

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +       A  + + +    +   +                 L+   L  V L     L 
Sbjct: 254 VFASVLGAAFYVLLSDWLSSLWPRW---------------LMLLGFLLIAVSLFMQRGLF 298

Query: 341 RL 342
            L
Sbjct: 299 GL 300


>gi|322833435|ref|YP_004213462.1| inner-membrane translocator [Rahnella sp. Y9602]
 gi|321168636|gb|ADW74335.1| inner-membrane translocator [Rahnella sp. Y9602]
          Length = 304

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 88/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P+
Sbjct: 9   LFNGITLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIALALLSFFGLHSFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLVFTIVVTGVYGWAIERIAYKPLRNSTRLAPLISAIGMSLILQNYAQISQGPRQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+      F    SFV       ++L+        +   +  T +    R ++ ++K
Sbjct: 129 GIPTMLDGAFRFHIGESFVQMTYTKIFILVASLAGMLVLSWIISNTKLGRMCRAVQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A  G+AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRIISLVFMIGAAMAGLAGVLVTMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL        GM    +  +  F               L ++++ R   
Sbjct: 248 GSLPGAMLGGLILGIAEAQFSGMVNSDYKDVFSFG-------------LLVVILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|288918587|ref|ZP_06412936.1| ABC transporter related protein [Frankia sp. EUN1f]
 gi|288349987|gb|EFC84215.1| ABC transporter related protein [Frankia sp. EUN1f]
          Length = 892

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 66/326 (20%), Positives = 126/326 (38%), Gaps = 20/326 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
               L                  I  +++ +    L +++G    +SL  +    +GAY+
Sbjct: 314 AVIALAGAVAVLLFGSAQWQDAAILSVVFGILVLSLVVLIGYANQISLAQMTVAGLGAYA 373

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
            V L     L   L     A++    G+++GLP+L+ RG  LAI T+ ++     +L   
Sbjct: 374 AVRLDLDIHLPFVLAPVAGAVVGAVAGLVVGLPALRVRGINLAILTMGLAVAVSGVLFDS 433

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
              T G AG                    F        +      V L    ++A +++ 
Sbjct: 434 THYTGGIAGSQPHPP------------TLFGLDVDAARHPDRYGLVALFWLVVAAGVVVA 481

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +RR+ +      +R N++A  S+  ++  AKLSAF +SSA  G AG         ++   
Sbjct: 482 VRRSGLGRRLLVVRTNERAAASVGISVARAKLSAFVISSAMAGAAGVLLGFRSSSVTFTQ 541

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F F E+I ++S+ ++ G+T++S       +  G +        +               +
Sbjct: 542 FSFLESINLVSLAVIAGVTAVSGGLLGGVLAFGGLVYLVIAKLHIG--------FVTDNY 593

Query: 321 TTLMVIALFLVILMRSHSLLRLRTPS 346
            T+   AL + +L+  + +   R+  
Sbjct: 594 ATIFGAALVVTVLLHENGVAWRRSFQ 619


>gi|146338080|ref|YP_001203128.1| high-affinity branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. ORS278]
 gi|146190886|emb|CAL74891.1| Putative high-affinity branched-chain amino acid transport system
           permease protein livM (ABC superfamily, membrane)
           [Bradyrhizobium sp. ORS278]
          Length = 338

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 76/319 (23%), Positives = 134/319 (42%), Gaps = 30/319 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
           + ++L L +     + +I      +LIY +    L+I+ G  G  SL     YA+GAY+ 
Sbjct: 30  FVVVLLLLIVPLFVKNFIIFQMTMLLIYGLAVLALNILTGGSGQFSLGQSAFYAVGAYTS 89

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI--K 139
            IL  +Y ++  L +P++ +I    G + G P+L+  G YLA+AT  ++     IL    
Sbjct: 90  AILMEQYNVNYALTLPIAGVICFGFGFLFGQPALRLSGVYLALATFALATAMPQILKLGF 149

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           ++  T G  G+ V       G  +   +               +YY  L +        +
Sbjct: 150 FEHWTGGVQGLVVTKPDAPFGLPMSQDMW--------------LYYFTLAITIAIYIFSV 195

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L R+    A+  IRDN+ A  ++   +   K  AF VS+   G+AG   A +   ++PD
Sbjct: 196 NLLRSRSGRAFMAIRDNEIAASAMGIDVATYKTLAFGVSAGITGVAGGLGAIAVQFVAPD 255

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            +     I +   +++GG+  L       A +I V  +  G++     +           
Sbjct: 256 SYTIVLAISLFLGMVVGGVGWLPGSFVGAAFIIFVPNIAEGISKGLSGA----------- 304

Query: 320 HTTLMVIALFLVILMRSHS 338
              +  + LFLVI +  H 
Sbjct: 305 ---VFGVLLFLVIFLVPHG 320


>gi|110835372|ref|YP_694231.1| branched-chain amino acid ABC transporter permease [Alcanivorax
           borkumensis SK2]
 gi|110648483|emb|CAL17959.1| branched-chain amino acid ABC transporter, permease protein
           [Alcanivorax borkumensis SK2]
          Length = 386

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/353 (14%), Positives = 103/353 (29%), Gaps = 35/353 (9%)

Query: 11  YDKILCLLAVVYPLL--LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           +  +L    ++  +L  LF    A     Y  ++  + L Y + A  L +V G  G+LSL
Sbjct: 18  FMGVLFGATLLVTILNQLFPADSALHVSAYTVTLLGKYLCYALLALALDLVWGYCGILSL 77

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                +A+G Y+  +   R      +                 LP      D    A L+
Sbjct: 78  GHGAFFALGGYAMGMYLMRQIGDRGVYGNPDLPDFMVFLNWSELPWYWQGFDQFWFAALM 137

Query: 129 MSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRF 169
           +  +   +   +  +                          +  +  +     +      
Sbjct: 138 ILLVPGLLAFVFGWLAFRSRVTGVYLSIITQALTYALMLAFFRNELGFGGNNGLTDFKDL 197

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
             F        + +          +  +  W+  + +      +RD +     +      
Sbjct: 198 LGFSLQSDSTRVGLLMATAVALAGAFVLCRWITGSKLGRVVLAVRDAESRARFVGYRTEH 257

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            KL  F +S+   G+AGA +      I+P  F    +I ++  V +GG  +L        
Sbjct: 258 YKLWIFTLSAILAGIAGALYVPQVGIINPGEFSPLNSIELVVWVAVGGRATLYGAVIGAI 317

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           ++     +  G+                      +      V +   H L+ L
Sbjct: 318 LVNYGKTVFTGI--------------MPEAWLFALGGLFVAVTVFLPHGLVGL 356


>gi|332528492|ref|ZP_08404480.1| branched-chain amino acid ABC transporter permease [Hylemonella
           gracilis ATCC 19624]
 gi|332042003|gb|EGI78341.1| branched-chain amino acid ABC transporter permease [Hylemonella
           gracilis ATCC 19624]
          Length = 325

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 65/337 (19%), Positives = 140/337 (41%), Gaps = 33/337 (9%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++L ++   + LL +     +F  +  +    +      ++LI+ + A GL+ ++G  GL
Sbjct: 1   MKLARWLPWVALLLLA----VFPLVAPSLGLDFYVGFVRRVLIFALAAAGLNFILGFGGL 56

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
            +L       +GAY+ V L      S WLL P + +++     ++GL +L+ RG Y  + 
Sbjct: 57  AALGHCGFLGVGAYTLVALAHSGVHSAWLLWPAALLVAALAAALIGLVALRTRGVYFIMI 116

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL  +++   + +  +P   G  G  +     F                   + +   Y 
Sbjct: 117 TLAFAQMLYYVAVSLRP-YGGDDGYNLVTPTSFG-------------VGLNTLNDSVFYG 162

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           V+L +   +  +     R+   +A   +RDN+    +L   +   +L+AFA++    G+A
Sbjct: 163 VVLALFTGAMLLFNRATRSRFGHALMGVRDNETRMRALGFPVGRIQLAAFAIAGGVAGLA 222

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA   +  +  SP M  ++++  ++ +V++GG+          A+ IG+ E+      Y+
Sbjct: 223 GAMLVSHNNFASPSMMHWTQSATLLVMVVIGGVGQRWGGPVGAAVWIGLEEIVKAYTDYW 282

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                             + + L  ++ +    +  L
Sbjct: 283 H---------------LPLGVLLVAIVFLAPRGIAGL 304


>gi|188532831|ref|YP_001906628.1| Putative branched-chain amino acid transport system, permease
           component [Erwinia tasmaniensis Et1/99]
 gi|188027873|emb|CAO95730.1| Putative branched-chain amino acid transport system, permease
           component [Erwinia tasmaniensis Et1/99]
          Length = 357

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/327 (15%), Positives = 95/327 (29%), Gaps = 27/327 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
                 +  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 41  PLAISTWTLTLVGKILCYAIVAVALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 100

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS---EIFQNILI 138
                      W  +P     +      + L  L      L           +     +I
Sbjct: 101 DGLPAFMSFLSWNELPWFWAGTQHFAWALCLIVLVPGVLALLFGWFAFRSKIKGVYFSII 160

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                  G    +  +  +              F        I +++  + +   S  + 
Sbjct: 161 TQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFRIDATGTRIALFFASVLLLIASLGVG 220

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 221 FALARSKFGRVLTAVRDAENRLMFCGYHPEGFKLFVWTLSAVLCGLAGALYVPQVGIINP 280

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        I+ G                  F  +F  
Sbjct: 281 GEMSPTNSIEAAIWVALGGRGTLIGPLLGAGIVNGAKS--------------GFTVAFPE 326

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345
                + +   LV L     ++ L   
Sbjct: 327 YWLFFLGLMFILVTLWLPRGVIGLLRR 353


>gi|170699826|ref|ZP_02890858.1| urea ABC transporter, permease protein UrtC [Burkholderia ambifaria
           IOP40-10]
 gi|170135278|gb|EDT03574.1| urea ABC transporter, permease protein UrtC [Burkholderia ambifaria
           IOP40-10]
          Length = 395

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/347 (13%), Positives = 97/347 (27%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + V    L+     A     Y  ++G +++ Y + A  L +V G  G+LSL   + 
Sbjct: 52  IAIGVGVPLAALVAPESSAFHLSAYAMTLGGKLMCYAIAALALDLVWGYCGILSLGHGLF 111

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 112 FALGGYAIGMYLMREIGHEGKYGSDLPDFMVFLDWHQLPWYWSGTQHLAWALALVVLVPA 171

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            +  +  +          R   F  +
Sbjct: 172 VLAWVFGFFTFRSRVKGVYLSIITQALTFAAMLLFFRNETGFGGNNGFTDFKRIAGFAIT 231

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +  +      L+  +   +  + +      +RD +     L  + +  KL  +
Sbjct: 232 SPGTRTVLLLLTFATLVLAFIVARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 291

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            +S+   G+AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 292 TLSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 351

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                               F       + +   LV L+    ++ L
Sbjct: 352 SFFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGL 384


>gi|220919493|ref|YP_002494797.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219957347|gb|ACL67731.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 352

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 109/337 (32%), Gaps = 27/337 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + +   +L  +      L  L      S      + + + + V+ A  L++V G  G  S
Sbjct: 1   MARARAVLRSVLPFLVGLPILLGVQALSPPDYTLILVNVGVNVILAVSLNVVNGFTGQFS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      A+GAY+   +   +       +P +            + +L         A  
Sbjct: 61  LGHAGFMAVGAYTAAKITLAFSGVQVAFLPEAV-------SDQLVFALALAASMATAAAA 113

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                  ++ ++   +     G     R                      +        +
Sbjct: 114 GFLVGMPSLRLRGDYLAIVTLGFGEIIRSLIENMKFLGQA-----TGLSGLPPYTNIAWV 168

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                 +  +   L  +    A   IR+++ A  ++       K+ AF +SSA+ G+AG 
Sbjct: 169 GVSAIATVVMARRLAVSTQGRALFAIREDEVAAEAMGVDTTGYKVRAFVISSAYAGLAGG 228

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A +    +P MF F  +I V+ +V+LGG+ S++    A  +L   +E       Y   
Sbjct: 229 LIAHAILLTTPRMFTFVRSIEVVVMVVLGGLGSITGSVVAAVVLTVALEGLREFQQY--- 285

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                               L +++L+R   +   R 
Sbjct: 286 ------------RMVAYAAGLIVLMLLRPQGIFGTRE 310


>gi|86160675|ref|YP_467460.1| chain amino acid ABC transporter inner membrane subunit
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85777186|gb|ABC84023.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 352

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 110/337 (32%), Gaps = 27/337 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + +   +L  +      L  L      S      + + + + V+ A  L++V G  G  S
Sbjct: 1   MARARAVLRSVLPFLVGLPILLGVQALSPPDYTLILVNVGVNVILAVSLNVVNGFTGQFS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      A+GAY+   +   +       +P +            + +L      +  A  
Sbjct: 61  LGHAGFMAVGAYTAAKITLAFSGVQLAFVPEAV-------SDQLVFALALAASMVTAAAA 113

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                  ++ ++   +     G     R                      +        +
Sbjct: 114 GFLVGMPSLRLRGDYLAIVTLGFGEIIRSVIENMKFLGQA-----TGLSGLPPYTNIAWV 168

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                 +  +   L  +    A   IR+++ A  ++       K+ AF +SSA+ G+AG 
Sbjct: 169 GVSAIATVVMARRLAVSTQGRALFAIREDEVAAEAMGVDTTGYKVRAFVISSAYAGLAGG 228

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A +    +P MF F  +I V+ +V+LGG+ S++    A  +L   +E       Y   
Sbjct: 229 LIAHAILLTTPRMFTFVRSIEVVVMVVLGGLGSITGSVVAAVVLTVALEGLREFQQY--- 285

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                               L +++L+R   +   R 
Sbjct: 286 ------------RMVAYAAGLIVLMLLRPQGIFGTRE 310


>gi|326796764|ref|YP_004314584.1| ABC-type transporter integral membrane subunit [Marinomonas
           mediterranea MMB-1]
 gi|326547528|gb|ADZ92748.1| ABC-type transporter, integral membrane subunit [Marinomonas
           mediterranea MMB-1]
          Length = 303

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 87/303 (28%), Gaps = 14/303 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y + AY   +  +          PV
Sbjct: 8   LVNGLSLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMVSAYITAVAIALLSFFGIESFPV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +    + +                   S +   I      +               
Sbjct: 68  IIFGTLIFTIFVTGVYGWVIERVAYRPLRGSSRLSILISAIGMSLILQNYVQLSQGAKQQ 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+ S    F     FV       ++L+      A +   +++T +    R  + + K
Sbjct: 128 GVPTLLSGAIRFDIGDGFVQITYMKLFILVASFVGMAVLTYIIQKTKLGRMCRATQQDPK 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L         + F + +    +AG             +  F   I   +  +LGG+
Sbjct: 188 MASILGIDTDKIISTVFVIGATMAALAGVLVTLDYGGFDFYV-GFIIGIKAFTAAVLGGI 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL     L  G+    +  +  F               L ++++ R   
Sbjct: 247 GSLPGAMLGGIILGLSEALFAGLISSDYKDVFSFS-------------LLVVILIFRPSG 293

Query: 339 LLR 341
           LL 
Sbjct: 294 LLG 296


>gi|121605356|ref|YP_982685.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120594325|gb|ABM37764.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 318

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 60/305 (19%), Positives = 117/305 (38%), Gaps = 15/305 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + ++  L +   +       +  +   ++L+Y + A  L+I +G  GL+SL   +  
Sbjct: 10  LIPVLLLLALAVLPPIAIGLDDNFWVAFFARVLVYAIAASALNIALGFGGLVSLGHALFI 69

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IG YS  +       S W+ + +  ++    G + GL SL+  G    + TL  +++  
Sbjct: 70  GIGMYSVSLPAYYGVSSGWIHLGICVLVCAVVGGLTGLISLRTSGIAFIMITLAFAQMGY 129

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +++  K                       S+     F    +   + +YY   G+    
Sbjct: 130 FVIVSLKQYGG---------------DDGMSIATASDFLGLQLNTPLSVYYCAWGLLVAL 174

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +L LR +    A R  R N +   S+   +   +L+A+ +S+   GMAG   A    
Sbjct: 175 TYWVLRLRTSPFGMALRAGRQNARRVMSVGLALQRYQLAAYTISAVLCGMAGMLLANLNA 234

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             SP    ++ +  +I +++LGG+ S+          +GV EL      ++         
Sbjct: 235 YASPSSMAWTVSGELIVMIVLGGLGSVFGPFLGAMAFLGVEELLKAATEHWMAVFGLAIL 294

Query: 315 SFNMR 319
              M 
Sbjct: 295 GVAML 299


>gi|154244997|ref|YP_001415955.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154159082|gb|ABS66298.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 314

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 60/318 (18%), Positives = 114/318 (35%), Gaps = 29/318 (9%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L+  L         Y  S+ + I +  + A GL+++ G  G +SL     Y +GAY   
Sbjct: 6   LLIAILVACLVTGGDYAISLAVVIGLQALPALGLTLLTGYTGQISLGHAAFYGLGAYGSA 65

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           ++G+  GL   L + +++ +       +G    + +G +LA+ATL    I Q   ++   
Sbjct: 66  LIGAALGLPALLSVIIASALVAGIAWAIGWLVFRLKGHHLAMATLAFGIIVQIAFVEMHF 125

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+   + L   G                +I +  +  V+ G   L+      L 
Sbjct: 126 LTGGPNGLSGIEPLSIFGK--------------DLITDAQVLPVVWGAVILAVLFAQNLI 171

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            +      R I +  K   SL   +   K     +S     + G  +A     +SP  F 
Sbjct: 172 SSPAGLVMRAIAEGDKVVGSLGNDVAAIKRKVMMLSGFLCAVGGGLYAHYVGYLSPGPFD 231

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
              ++ ++ +V LGG  ++  +    A +  V E    +                     
Sbjct: 232 VGFSVRLLLMVALGGFANIWGVLFGVAFVTLVGEALKPL---------------GAFDVI 276

Query: 323 LMVIALFLVILMRSHSLL 340
                L + ++     L+
Sbjct: 277 AYGTLLVVSVIFFPRGLM 294


>gi|297198973|ref|ZP_06916370.1| urea ABC transporter, permease UrtB [Streptomyces sviceus ATCC
           29083]
 gi|297147252|gb|EFH28544.1| urea ABC transporter, permease UrtB [Streptomyces sviceus ATCC
           29083]
          Length = 321

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 89/305 (29%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A G ++V G + L++      +  GA+            I      
Sbjct: 20  LANGLLLGSMYGLIAIGYTMVYGIVQLINFAHGEIFMTGAF----GAFTVYFYILPDGTS 75

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+      +  G+ ++         A   +    +   +      +      V +    
Sbjct: 76  MALAVPLMLIGGGIVAILIAVGAERFAYRPLRGAPRLAPLITAIGLSLALQEVVRNFYPH 135

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V             +  +    ++++      +++  ++R++    A +    +  
Sbjct: 136 ADRAVAFPGLDATHDIGSITIKDADIFLIVAAIVCMSALAFFVRKSRTGRAMQATAQDPD 195

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        + AFA+   F  +A   +      I   M  F   +   +  +LGG+
Sbjct: 196 TAQLMGIDTNRIIVIAFAIGGFFAAVAAVAYGMKYGSIDYRM-GFLMGLKAFTAAVLGGI 254

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L     L            L                 L +V+L+R   
Sbjct: 255 GNIYGAMLGGLVLGVAETLASAYIDDIPGMHL---FGGGSWKDVWAFCLLIIVLLVRPQG 311

Query: 339 LLRLR 343
           LL  R
Sbjct: 312 LLGER 316


>gi|225574032|ref|ZP_03782677.1| hypothetical protein RUMHYD_02128 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038721|gb|EEG48967.1| hypothetical protein RUMHYD_02128 [Blautia hydrogenotrophica DSM
           10507]
          Length = 803

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/329 (12%), Positives = 103/329 (31%), Gaps = 34/329 (10%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  +      +  +V   +  +   +  ++  ++ + +    ++  A   + ++G  G +
Sbjct: 501 KKPRLYLFSLIAMIVLYFVCGMMSNSIFTKFGVELLAVGFAPFIFAALSQTFIIGL-GHI 559

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L       +       +  +      L      ++            +  RG    I T
Sbjct: 560 DLGVGAFMGLVNVICATILDQNTGLGIL-----CLVGLIAAYSCMGLVIHLRGVPPIIVT 614

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L MS ++  I    + +  G    ++     F    ++                      
Sbjct: 615 LGMSFVWTGIAYVLQDVPGGHVPDWMVSLFNFNNPVLQG--------------------- 653

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L    +  ++ L + R+      R   +N+ A  +   +   A    + ++  F  M G
Sbjct: 654 VLLWLIVFIALALLIYRSRYGTVLRGFGNNESAMRNSGWSKAKAYWLTYLIAGIFAAMGG 713

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
              ++     S      +  ++ ++ VI+GG    S           +  +  G++    
Sbjct: 714 IAQSS-ITAASDVNASSTYTMLTVAAVIIGG-GYFSGGVV-----THIGTVFGGISLTMI 766

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           + LL           T+  + L L++ MR
Sbjct: 767 SVLLGLLKVSTDYTATIQGLVLILILSMR 795


>gi|309798596|ref|ZP_07692871.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus infantis SK1302]
 gi|308117832|gb|EFO55233.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus infantis SK1302]
          Length = 318

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 77/340 (22%), Positives = 140/340 (41%), Gaps = 42/340 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + +   L ++   L+ L +       +   +  QI I ++ A GL+++VG  G  SL 
Sbjct: 6   KVNILWLFLLLLGYGLISLLVSVGVLNLFHIQIIEQIGINIILAVGLNLIVGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+GS      + +  + + A+I+G   +++G+P+L+ +GDYLA+ATL
Sbjct: 66  HAGFMAIGAYAAAIIGSKSPTYGAFFGAMLLGAIIAGLVALVVGIPTLRLKGDYLAVATL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++EI +  +I    +TNG AGI                                    +
Sbjct: 126 GVAEIIRIFIINGGSLTNGAAGILGIPNFTTWQM-------------------------V 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++    L   R+ I     ++R+++ A  S+       K+ AF   +    +AG 
Sbjct: 161 YFFAVITTIATLNFLRSPIGRLTLSVREDEIAAESVGVNTTKIKIIAFVFGAVTASIAGT 220

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             +     + P  + F  +I V+ IV+ GG+ S++    A  +L  +  L   +      
Sbjct: 221 LQSGFIGSVVPKDYTFINSINVLIIVVFGGLGSITGAIVAAIVLGILNMLLQDV------ 274

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +  +AL LV++ R   LL     S 
Sbjct: 275 ---------ASVRMIIYALALVLVMIFRPGGLLGTWELSL 305


>gi|257095156|ref|YP_003168797.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257047680|gb|ACV36868.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 307

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 89/306 (29%), Gaps = 10/306 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +GL++        IG      +      S    + V
Sbjct: 8   LINGLTLGAVYALVALGYTMVYGIIGLINFAHGEVVMIGTMVAFTVIVSLAGSGMSPLLV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +      ++  +                         I    +    A I        
Sbjct: 68  LGVGLLVSVVVCMILGWALERVAYRPLRHAPRLTPLITAIGMSIVLQNVAMIIWG----R 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T   +I    +      +      ++     +   +I  + RT I  A R    N  
Sbjct: 124 NYITFPPMIDKKIYELGGASFTNVQVAIVSLAALMMLGLIYLVHRTRIGMAMRATAQNPH 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   I      AF + SA   +AG    +  + I+     F   +   +  +LGG+
Sbjct: 184 VASLMGVDINRVIAMAFIIGSALGAVAGCMVGSYYE-IAHYQMGFMLGLKAFTAAVLGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  L  G         L      +        I L +V++ R   
Sbjct: 243 GNLAGAMAGGLLLGVIEALGAGYIGDLTGDFLG-----SHYQDIFAFIVLIIVLMFRPSG 297

Query: 339 LLRLRT 344
           L   RT
Sbjct: 298 LFGERT 303


>gi|258543390|ref|YP_003188823.1| urea short-chain amide or branched-chain amino acid transporter
           permease [Acetobacter pasteurianus IFO 3283-01]
 gi|256634468|dbj|BAI00444.1| urea short-chain amide or branched-chain amino acid transporter
           permease protein [Acetobacter pasteurianus IFO 3283-01]
 gi|256637526|dbj|BAI03495.1| urea short-chain amide or branched-chain amino acid transporter
           permease protein [Acetobacter pasteurianus IFO 3283-03]
 gi|256640578|dbj|BAI06540.1| urea short-chain amide or branched-chain amino acid transporter
           permease protein [Acetobacter pasteurianus IFO 3283-07]
 gi|256643635|dbj|BAI09590.1| urea short-chain amide or branched-chain amino acid transporter
           permease protein [Acetobacter pasteurianus IFO 3283-22]
 gi|256646690|dbj|BAI12638.1| urea short-chain amide or branched-chain amino acid transporter
           permease protein [Acetobacter pasteurianus IFO 3283-26]
 gi|256649743|dbj|BAI15684.1| urea short-chain amide or branched-chain amino acid transporter
           permease protein [Acetobacter pasteurianus IFO 3283-32]
 gi|256652731|dbj|BAI18665.1| urea short-chain amide or branched-chain amino acid transporter
           permease protein [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256655787|dbj|BAI21714.1| urea short-chain amide or branched-chain amino acid transporter
           permease protein [Acetobacter pasteurianus IFO 3283-12]
          Length = 379

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 97/359 (27%), Gaps = 33/359 (9%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F   +        +  V+    L           ++ S+  + L Y + A  + +V G  
Sbjct: 12  FPGAIRMAAVAFAVTIVLAGASLLPEANPLHVSAFVVSLAGKYLAYAILALSVDLVWGFA 71

Query: 64  GLLSLNCVIAYAIGAYSYVILGS----------------RYGLSIWLLIPVSAMISGACG 107
           G+L+L     +A+G Y+  +                         W  +P     +    
Sbjct: 72  GILTLGHAAFFALGGYAMGMYLMREIGTRGVYGNPDLPDFMIFLSWKSLPWYWWGTDHFA 131

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
             M L  +           L        + +         A +    +          L 
Sbjct: 132 WAMLLVLIVPGLLAGVFGWLAFRSRVSGVYLSIITQALTYALMLAFFQNGLGFGGNNGLT 191

Query: 168 RFFRFPSSFVIYEIFMYYVLLG---MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
            F     + +   +    +L+    +      +  WL           +RD +     L 
Sbjct: 192 DFKDILGADLHSPLTRAALLVITGFVLAACLLLSRWLVSGRFGYLLVAVRDAESRTRFLG 251

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                AKL  +  S+   G+ GA +      I+P  F  + +I  +  V +GG  +LS  
Sbjct: 252 YRPEQAKLLIWVFSAMVAGIGGALYVTQVGIINPGEFAPANSIESVIWVAVGGRGTLSGS 311

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                ++     L       ++   L                            L+ LR
Sbjct: 312 VLGAVLVNCGKTLFTAWLPEFWLYGLGLLFLVTTLFL--------------PQGLMGLR 356


>gi|330838330|ref|YP_004412910.1| ABC-type transporter, integral membrane subunit [Selenomonas
           sputigena ATCC 35185]
 gi|329746094|gb|AEB99450.1| ABC-type transporter, integral membrane subunit [Selenomonas
           sputigena ATCC 35185]
          Length = 295

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 93/303 (30%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GAY      +  GL I   + +
Sbjct: 11  LINGVSLGSIYALIALGYTMVYGIIKLINFAHGDIYMVGAYLGFFAVTNLGLPIVPALIL 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I+G  G+++   + K       I+ LI +      L                     
Sbjct: 71  AMIITGLLGIVIEKLAYKPLRHAPRISALISAIGVSLFLEYAMMYFVSPTPRTFPPLF-- 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                    +   F    ++       +L   CFL   +   ++ T I  A R    + +
Sbjct: 129 ---------QDVAFSVGSLVINGQQMLILGITCFLMVVLTYIVQYTKIGKAMRAASYDTE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           F + S+   +AG       + I P M      I      +LGG+
Sbjct: 180 TAQLMGINADRVISFTFWIGSSLAAVAGVLVGVYYNSIDPLM-GIMPGIKAFVAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L        IL  V     G     F     F               L LV+L +   
Sbjct: 239 GILPGAVAGGLILGIVEAFVSGFVSSTFRDAAAF-------------AILILVLLFKPAG 285

Query: 339 LLR 341
           L  
Sbjct: 286 LFG 288


>gi|85705518|ref|ZP_01036616.1| hypothetical protein ROS217_01810 [Roseovarius sp. 217]
 gi|85669943|gb|EAQ24806.1| hypothetical protein ROS217_01810 [Roseovarius sp. 217]
          Length = 368

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/346 (13%), Positives = 101/346 (29%), Gaps = 28/346 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           ++K L  L  +  L +   +    +  ++ +      +Y M A  +S+  GS G+L++  
Sbjct: 7   HNKTLQWLFYIAVLAVLGAVPLISNDAFLLNQLAIYGVYGMLAVSISLCWGSGGILNMGQ 66

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
            IA+ +GAY   +       +   + P           ++  P             +   
Sbjct: 67  GIAFGLGAYCMAMTMQMQTQADGTIPPFMLNNGLDSLPLLWQPFQNTSTGIFLALFVPTV 126

Query: 131 EIFQNILIKWKPITNGKAGIYVA--------------DRLYFLGTTVRSLIRFFRFPSSF 176
                  I +    +G     +                        +          +  
Sbjct: 127 FYLIFGGIMFTARVSGPFFAIMTLATLSAFATIFVDLQPYTNGVNGISPPSSLKLGQTEI 186

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
             Y    Y+ +  +          + ++      R ++D+ +    L   +   +   + 
Sbjct: 187 DPYSSGAYWFVFALLAACTVAAKLINQSRFGLIVRALKDDPERVRFLGYNVAIYETLVYT 246

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           +S     +AG+ FA     +SP  F+   +I ++  V LGG  SL         + G   
Sbjct: 247 LSGLIAAIAGSCFAVLTQYVSPAQFEVGFSISIVIWVALGGRNSLIWAMFGAFTVQGAQS 306

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                              F      ++  +  LV+      L  L
Sbjct: 307 YV--------------GDQFLSTWILILGFSFILVVRFLPGGLAGL 338


>gi|226310201|ref|YP_002770095.1| branched-chain amino acid ABC transporter permease [Brevibacillus
           brevis NBRC 100599]
 gi|226093149|dbj|BAH41591.1| probable branched-chain amino acid ABC transporter permease
           [Brevibacillus brevis NBRC 100599]
          Length = 348

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 101/315 (32%), Gaps = 24/315 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY-----------VILGSR 87
           +        +Y + A G ++V G L +++      + +GA+              + G  
Sbjct: 41  LVDGLTLGFMYAVVALGYTMVYGILEIINFAHGDIFMVGAFIGTEVLLISDALGALEGMN 100

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             +++++ + ++ +++GA G+ +   + +       +  LI +     +L          
Sbjct: 101 PFVALFITLIIAMVLTGALGVGIERIAYRPLRGAPRLVPLISAIGVSFLLQDLVRF---- 156

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                A           +L        S          V++    +  ++ L++ +T   
Sbjct: 157 ---TEALARNEFYLNSPALFTGSIPLGSIATIPTKGLIVIVIAIIMMIALTLFVNKTKWG 213

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
            A R +  +Q     +   +    +  F + S+  G  G  FA +   I P    F   +
Sbjct: 214 IAMRAVAQDQSTASLMTINVNKVIMLTFLIGSSLGGATGVLFAQNYGTIDPY-IGFILGL 272

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              +  +LGG+ +L        +L  +  L         N                    
Sbjct: 273 KAFTAAVLGGIGNLRGAMIGGVLLGLLESLSGAFMGPLTNGAFG-----AEYKDVFAFSI 327

Query: 328 LFLVILMRSHSLLRL 342
           L LV+L +   L   
Sbjct: 328 LILVLLFKPEGLFGE 342


>gi|189499667|ref|YP_001959137.1| inner-membrane translocator [Chlorobium phaeobacteroides BS1]
 gi|189495108|gb|ACE03656.1| inner-membrane translocator [Chlorobium phaeobacteroides BS1]
          Length = 280

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 71/298 (23%), Positives = 130/298 (43%), Gaps = 22/298 (7%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           IY++    ++++ G  GLLSL+    Y IGAY+  +L   +G S   ++ +S +I+    
Sbjct: 4   IYIILGLAMNLLAGYSGLLSLSQAAFYGIGAYTTTVLLVYFGYSFPAVLAMSVIINVIAC 63

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           + + + S++FR  +  +ATL    I   +L  W  +TNG  GI    +    G    SL 
Sbjct: 64  IPVIVFSIRFRDLFFVLATLAWQVIVFTVLYNWISVTNGPYGIGGIPKPVVFGYAFESLP 123

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
            F               ++   +C         L ++ +S  ++ +RD+Q A  S     
Sbjct: 124 HFS--------------FLAGVVCVFVLLFFYGLHQSPLSRYFQGVRDDQLAMLSFGKKP 169

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
            + K  A ++SS    +AGA FA+    I P  F  +E+I++ISIV++GG+ ++      
Sbjct: 170 GYYKAIAVSISSGASAIAGALFASYYSYIDPTSFTLNESILIISIVLIGGLGTMRGSVAG 229

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
               + + E+   +N          D   +     +  + L L++L R +        
Sbjct: 230 ALFYVLLPEVLRFVNVP--------DAVASNLRMMIYALILILMVLFRPYGFFGNYRF 279


>gi|241206166|ref|YP_002977262.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860056|gb|ACS57723.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 333

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 54/345 (15%), Positives = 117/345 (33%), Gaps = 27/345 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
                  +    +   ++L +      +     ++  +++   +    L +V G  G+ +
Sbjct: 12  FQHRRGFIGRDLIGIAVILAVAAIGYFAFPDNLALLTRMITIALLVLSLDLVTGYCGVAT 71

Query: 68  LNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           L     +  GAY+  IL + Y      L++          G++ G   L+  G    + +
Sbjct: 72  LGHAALFGSGAYAAGILSAHYGINDPLLMMLAGIAGGAVAGLLCGAIILRAHGLPQLVLS 131

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           + +  +F     K    T G  G+         G               F +Y    ++ 
Sbjct: 132 IALINLFHEFANKASSWTGGSDGLSGIAPDPVFGL------------FEFDLYGHTAFFF 179

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            + +  +   ++  L R+      R I+ +     ++  +   A +  +A+S A  G+ G
Sbjct: 180 GMALLLIVFVLLRVLVRSPFGMLCRAIKQDPLRIRAMGASPKAALIRMYAISGAVAGVGG 239

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A  A S   +  D   F+++   + +++LGG  SL      T I +   +     N +++
Sbjct: 240 ALNAISTQVVGLDSLSFTQSAEALVMLVLGGTGSLFGALSGTLIFMLFEDYVSAANPFHW 299

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                          T++   L  V+L     L           R
Sbjct: 300 --------------LTMVGALLIAVVLFAPKGLYGTAAAFVGRRR 330


>gi|300693058|ref|YP_003749031.1| leucine/isoleucine/valine transporter permease subunit
           (transmembrane ABC transporter) [Ralstonia solanacearum
           PSI07]
 gi|299075095|emb|CBJ34377.1| leucine/isoleucine/valine transporter permease subunit
           (transmembrane abc transporter) [Ralstonia solanacearum
           PSI07]
          Length = 299

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 58/302 (19%), Positives = 118/302 (39%), Gaps = 41/302 (13%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             ++ + + I  + A  + + + S GLL++       IGAY+  +L     +   + +  
Sbjct: 11  YSNLVLTLGINALLALSIYLTL-SCGLLAMANAAFMGIGAYTSALLTMNAEMPFPVALLG 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                    +I+G P+L+  G YLA+ATL   E+ + +++  +  T G  G+    +L  
Sbjct: 70  GMAAPAVVALIIGGPTLRLSGVYLAMATLGFGEVVRVLILNTESWTGGALGLNSIPQLTE 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                       +     L+  ++  LRR+ +  A+  I++++ 
Sbjct: 130 WWH-------------------------VALAVVLTLFVLARLRRSKVGRAFEAIKEDET 164

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +   KL AF + +   G+AGA  A     I P  + F   + ++++ ILGG 
Sbjct: 165 AAGLMGINVAGTKLLAFVLGAMIAGLAGALNAHLTFFIGPAEYGFDRGVEILTMAILGGT 224

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           + L+     + IL  + EL      +                  +  + L L++L     
Sbjct: 225 SGLAGPVLGSVILSLLPELLRAFKDF---------------RLVVNGLILMLIVLFLPKG 269

Query: 339 LL 340
           + 
Sbjct: 270 IW 271


>gi|70734101|ref|YP_257741.1| branched chain amino acid ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68348400|gb|AAY96006.1| probable permease of ABC branched chain amino acid transporter
           PA4912 [Pseudomonas fluorescens Pf-5]
          Length = 304

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 89/304 (29%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P+
Sbjct: 9   LINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIESFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLIFTVVVTGIYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGAKQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+ +        + FV       ++L+      A +   ++ T +    R  + ++K
Sbjct: 129 GVPTLLAGAWKVDIGTGFVQLTYTKIFILVAAFAGMALLTYIIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFVIGAAMAALAGVLITMNYGTFDFYA-GFVIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL     L  G+    +  +  F               L L+++ R   
Sbjct: 248 GSLPGAMLGGIILGISESLFSGLINSDYKDVFSFS-------------LLVLILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|149203797|ref|ZP_01880766.1| inner-membrane translocator [Roseovarius sp. TM1035]
 gi|149142914|gb|EDM30956.1| inner-membrane translocator [Roseovarius sp. TM1035]
          Length = 412

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 101/359 (28%), Gaps = 30/359 (8%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLF--------LFLGATKSQKYIDSMGIQILIYVMFAWGL 56
                 +  +  +  V   L  F         F         + +  I   IY + A GL
Sbjct: 63  PTLTRAWQALPWIAVVAVFLFAFRAADPDNVCFTSGAFVTSQLVNGLIMGTIYGLMALGL 122

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI------WLLIPVSAMISGACGMIM 110
           +++   +G++S +    Y IG      +   +   +           V+  I  A     
Sbjct: 123 ALIFSIIGIVSFSHGEFYMIGGMVVYYMTEVWAPGLGPIAAVIAACAVTFGIGAAFERAF 182

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF- 169
             P    + +      ++++      L       +G   +  +       +   +     
Sbjct: 183 FTPIYAGKVERPNEYAILVTFGLAFFLQYLVQGLSGANPVKASPFFELPRSEWPAGAPII 242

Query: 170 -----FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
                       +          +    +  ++I +L  T    A R    +++A     
Sbjct: 243 ETTRSNIELFDTISISTPRLTAAILSVVMLLALIWFLYNTWTGRALRATAQDRQAAAVAG 302

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                  + AF +     G+AGA    +   +          +    I++LGG+ SL   
Sbjct: 303 INPGRMNMLAFGLGCMLAGLAGAVLVQAFSWLPQT--GAIPALRAFVIIVLGGLGSLPGA 360

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                IL  V     G         +              +I L LV+L+R   L   +
Sbjct: 361 FIGGLILGLVEAAGAG--------CVPDPTRAAAYLPAYGMIILTLVLLLRPQGLFGRK 411


>gi|318057770|ref|ZP_07976493.1| branched-chain amino acid ABC transporter permease protein
           [Streptomyces sp. SA3_actG]
 gi|318079480|ref|ZP_07986812.1| branched-chain amino acid ABC transporter permease protein
           [Streptomyces sp. SA3_actF]
          Length = 382

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/323 (13%), Positives = 101/323 (31%), Gaps = 19/323 (5%)

Query: 5   SLRLNKYDKILCLLAVVYPLL-------LFLFLGATKSQKYIDSMGIQILIYVMFAWGLS 57
                +  +    +A+V   +       +   L           +    L++   A G  
Sbjct: 18  PDPKRRLLRWWPAVALVVLFVLPYGTVEVPGLLDGPVGSAGSLQLLALCLLFGGLATGYD 77

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           +++G  GLLS    + +A G+Y+        GL  WL   +  ++  A  ++ G  SL+ 
Sbjct: 78  LLLGRTGLLSFGHALYFAAGSYATNTFLREAGLPFWLAAVLGLVLGVAVALLFGAVSLRV 137

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
            G   ++ TL  ++    ++ +      G                + +           +
Sbjct: 138 TGIGFSMVTLAFAQAASLLVSRDPGGFTG------------GEEGISAPGDALPGSLVGI 185

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                +Y++ L    L  +++     +     W  I++N++    L       KL AF V
Sbjct: 186 GNTANLYWIALAFLVLCLAVVHRTTHSPTGRVWEGIKENERRVEVLGLRPYGFKLVAFVV 245

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           +     + G          +P        + ++ +V+LGG  +         +       
Sbjct: 246 AGTLAALGGIVHLLLTGGSTPATTTSEFTLSLLVMVVLGGSGTRWGPMLGGILYTWADHR 305

Query: 298 CCGMNFYYFNSLLKFDCSFNMRH 320
              +      + L       +  
Sbjct: 306 LGDLANSATVADLPGALRVPLSQ 328


>gi|312879502|ref|ZP_07739302.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Aminomonas paucivorans DSM 12260]
 gi|310782793|gb|EFQ23191.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Aminomonas paucivorans DSM 12260]
          Length = 284

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 112/310 (36%), Gaps = 43/310 (13%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S+     I ++   GLSI  G  GL S        IGAY   IL   Y +   L +
Sbjct: 2   NYVLSIVTLAGINMIAVLGLSIFTGFTGLFSFGHAAFVGIGAYVSAILTYYYFVPFPLAL 61

Query: 97  PVSAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
               + +GA  +++G+P+   K R DY AIA L   E  + +L   +             
Sbjct: 62  GAGVVAAGAVSLVIGVPTLRAKLRSDYFAIAILGFGEALRVLLENLEITNGA-------- 113

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                                  I       +++     S  +      +        +R
Sbjct: 114 ------------------RGLPGIEPFTTLPLVVLCLAGSVWVARNFLLSRFGQGCIALR 155

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           ++  A       +  A+L +  VS+AF G++G   A     + P MF  +++ ++++ VI
Sbjct: 156 EDPVAAEMAGVHLFRARLLSLVVSAAFCGLSGGLLAHYLSFVQPVMFTLTQSTMLLAAVI 215

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
            GGM S+S    A+ + I + E                     M       + L L++L 
Sbjct: 216 AGGMGSISGPLIASFLFIALPEALR---------------VAQMWRLVAYGLVLVLIMLF 260

Query: 335 RSHSLLRLRT 344
           R   L+  + 
Sbjct: 261 RPQGLMGYQE 270


>gi|119900020|ref|YP_935233.1| ABC transporter permease [Azoarcus sp. BH72]
 gi|119672433|emb|CAL96347.1| ABC transporter permease protein [Azoarcus sp. BH72]
          Length = 310

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/304 (17%), Positives = 100/304 (32%), Gaps = 7/304 (2%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +   +Y + A G ++V G LGL++        +GA + +            + P+ 
Sbjct: 9   INGLVIGSVYALIALGYTMVYGILGLINFAHGDVLMVGAMTALQTMLFLMGVAPGMSPLV 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +       I     + F  + LA   L  +      LI    ++     I +       
Sbjct: 69  MLTIALLVAIPVSMLIGFTMERLAYRRLRNAPRLAP-LITAIGMSFLLQTIAMIIWGRNY 127

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T  + +      P   V        +++    L   + L + RT I  A R   +N + 
Sbjct: 128 HTFPQLISTTPLQPVEGVFVTPVQIVIVIVSALLMIGLTLLVSRTRIGRAMRATAENHRT 187

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +           F + +    +AG  +A++   I+     F   +   +  +LGG+ 
Sbjct: 188 ASLMGVDTNAVIAFTFVIGAGLAAVAGVMYASNYG-IAHYGMGFMPGLKAFTAAVLGGIG 246

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           +L        +L  V     G   +     L F    +        + L LV++ R   L
Sbjct: 247 NLGGAMVGGVVLGLVESFGAGYIEH-----LTFGFLNSSYQDIFAFLILGLVLIFRPTGL 301

Query: 340 LRLR 343
           L  R
Sbjct: 302 LGER 305


>gi|296454524|ref|YP_003661667.1| inner-membrane translocator [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296183955|gb|ADH00837.1| inner-membrane translocator [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 604

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 67/322 (20%), Positives = 133/322 (41%), Gaps = 29/322 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
               + L         Y+  +G Q+ IY + A GL+++ GS G   L     +A+GAY+ 
Sbjct: 311 LIGAVALVSTPFFFNDYLSGVGTQVAIYAIAAVGLTLISGSAGQTILGMAGPFAVGAYAS 370

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            IL ++      + +P + +I+     ++  P  +F G Y+AIAT+ +  +   I+   +
Sbjct: 371 AILATQAHWPFLVALPAAGVIAALVASVLTFPVWRFSGHYVAIATIGVGAVMVAIIRLAE 430

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
           P+T G  GI         G T+ +                  Y + + +  ++  I++ +
Sbjct: 431 PLTKGSLGIQGIPFPKVFGVTLYTQQMM--------------YLLDVIVLLVTLVIVMRI 476

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
           R   +   +  +  +++A  +L+      K  A+A+++ F G+AG+  A     I P +F
Sbjct: 477 RTAHLGRVFEAVGSDREASEALSIRTGAYKALAYALAAFFAGLAGSLLAHQYTYIDPTIF 536

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             + +I++++I++LGGM S       + +LIG  EL    +               +   
Sbjct: 537 NSNMSILILTIIVLGGMNSPLGAVLGSIVLIGAPELLRFASDARILLYGVLLVLVIL--- 593

Query: 322 TLMVIALFLVILMRSHSLLRLR 343
                        R   L   +
Sbjct: 594 ------------FRPQGLFARK 603



 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 96/302 (31%), Gaps = 25/302 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I    Y + A G+S++ G   + +       A+G      LGS +G  I        ++
Sbjct: 9   LIHGSAYALVAVGMSLIFGVTNVANFAQGSIVAVGMMIAWWLGSSWGWGIVPTFVAVLVV 68

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +   G+IM +  +        IA L+ +     +L     I  G                
Sbjct: 69  TALLGLIMNVAIIAPLEGRKPIAALLATIGVGQVLDNGLQIVFGPQ-----------TRP 117

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
              L++ +    + V +      ++         +  +L+      A R    + +A   
Sbjct: 118 FPKLLQTYNLQVAGVRFGTSDIVMVTLAVLSMLGLWAFLKFGKAGQAIRATSQDPEAAMQ 177

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +   +  +F + +   G++G F       I+  M   +  +       +GG+ S+ 
Sbjct: 178 MGIPVKAIRNLSFVIGAVLAGVSGIFVGLFNGNIN-PMNGGTIGMTAFVAATIGGLGSIP 236

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                            G                +  H  +   AL ++++++   LL  
Sbjct: 237 GA-------------VVGGLVLGVVEAFGISLFGDGAHDLITFGALIIILIVKPQGLLGP 283

Query: 343 RT 344
           +T
Sbjct: 284 KT 285


>gi|167837576|ref|ZP_02464459.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis MSMB43]
          Length = 344

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/347 (14%), Positives = 95/347 (27%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + V    L      A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 1   IAVGVGVPLAALAAPESSAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 60

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 61  FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLAPA 120

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            Y  +  +          R   F  +
Sbjct: 121 ALAWAFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 180

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  ++ +       S      +  T +      IRD +     L  + +  KL  +
Sbjct: 181 SPGTRTVLFLITFAALVASFVAARAIVTTKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 240

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+   G+AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 241 VVSAVLCGIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 300

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +                  F       + +   LV L+    ++ L
Sbjct: 301 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 333


>gi|76802701|ref|YP_330796.1| branched-chain/neutral amino acids ABC transporter permease
           [Natronomonas pharaonis DSM 2160]
 gi|76558566|emb|CAI50158.1| ABC-type transport system permease protein II (probable substrates
           branched-chain/neutral amino acids) 1 [Natronomonas
           pharaonis DSM 2160]
          Length = 435

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 57/387 (14%), Positives = 113/387 (29%), Gaps = 62/387 (16%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
             L  L  G       +  +    L + + A  L++  G  GL ++  V    +G Y+  
Sbjct: 32  FALSVLDQGLGSIVSTLARVTFLSLSFALVALALNLHWGYTGLFNIGVVAFMMVGVYTMA 91

Query: 83  ILGSRYGLSI---------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +L      +          W+ I     ++   G++  LP+L+ R DYLAI TL +SEI 
Sbjct: 92  MLTRPPDPAFGAPGLGLPLWVGILAGVAVAAILGLLTALPALRLRADYLAIVTLGLSEIV 151

Query: 134 Q----------NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI-- 181
           +           ++      T     +            +              ++ +  
Sbjct: 152 RLTIASGDFNEWLIENVGAGTGSATSLTFTVSPQTPIRGLYFTDAGDPTALGTAVFGVTD 211

Query: 182 ------------FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                            L  +       +  L R+      + IR+++    SL   I  
Sbjct: 212 DLGISQSAVVDWTYILALAVVLIAVYLFLERLGRSPFGRILKAIREDEVVASSLGKDIRM 271

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF--SENIIVISIVILGGMTSLSKIAKA 287
           AK+  F +  A +G+ G  +  +    +P    +       +   VI+GG  S +     
Sbjct: 272 AKIKVFVIGCALMGLGGILWYGAEGAANPQAMTYSPLYTFYIFIAVIVGGAGSNTGSVLG 331

Query: 288 TAILI---------------------------GVVELCCGMNFYYFNSLLKFDCSFNMRH 320
             +                                 +    +  +   +           
Sbjct: 332 GIVFASFLFEGPRRAGGFVRDRIAADVDTPENFAEAVAPFSSLDFTPFIAYATDEIAALQ 391

Query: 321 TTLMVIALFLVILMRSHSLLRLRTPSN 347
             L+ + L  ++  R   LL  R  + 
Sbjct: 392 FVLLGLVLIFIMHRRPDGLLGHRVETA 418


>gi|83310904|ref|YP_421168.1| branched chain amino acid ABC transporter permease
           [Magnetospirillum magneticum AMB-1]
 gi|82945745|dbj|BAE50609.1| Branched-chain amino acid ABC-type transport system, permease
           components [Magnetospirillum magneticum AMB-1]
          Length = 318

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 95/312 (30%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGL 90
           + +      IY + A G ++V G LG+++      Y +GA+  +I          +   L
Sbjct: 22  LINGLTLGAIYGLVALGYTMVYGVLGMINFAHGTIYMVGAFISLITFLVATTVLGTSVPL 81

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           ++ L +  +  ++   G      + +       +A LI +     +L  +     G    
Sbjct: 82  ALVLTLVAAMALTALWGWTAERVAYRPLRSAPRLAPLISAIGVSIMLQNFVAQAQGARAK 141

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +           R  I         V        ++     L A     + RTA+  A 
Sbjct: 142 PLPP-------VFRGGITLMDSGDFVVSLSWMQMVIMALTLALMAVFTWVITRTALGRAQ 194

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    + K    L   +     + F + +   G+AG         I      F   I   
Sbjct: 195 RACEQDMKMASLLGIDVDRVISTTFVIGAGLAGVAGMMVTLYYGVIDFY-IGFLAGIKAF 253

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ SL        ++  +           +  +  F               L  
Sbjct: 254 TAAVLGGIGSLPGAMLGGLLIGLIEAFWSAYFSIEYKDVATFS-------------ILVA 300

Query: 331 VILMRSHSLLRL 342
           V++ R   LL  
Sbjct: 301 VLVFRPTGLLGR 312


>gi|39935347|ref|NP_947623.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009]
 gi|39649199|emb|CAE27719.1| possible ABC transporter, permease protein [Rhodopseudomonas
           palustris CGA009]
          Length = 323

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 114/324 (35%), Gaps = 30/324 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            + + ++  L L    +  Y   +  Q L + + A   ++++G  GLLS    +      
Sbjct: 21  MIAFGIMTALLLVVPFTGVYPFFVM-QGLCFALLACAFNLLIGYGGLLSFGHAMFLGTAG 79

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y        +GL   L I      + A  ++ GL +++ +G Y A+ TL +S++   I +
Sbjct: 80  YVSGHALKVWGLPPELAIIAGTAAAFALSVLTGLIAIRRQGIYFAMITLALSQLLYFIYL 139

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +                       ++ + +   F    +     +Y+V+L    L   +I
Sbjct: 140 QA--------------PFTHGEDGIQGIPQGKLFGFIDLSNATTLYFVVLAGFLLGFLVI 185

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
                +      + IR+N+    SL       KL AF +S    G AGA         S 
Sbjct: 186 YRAINSPFGEVLKAIRENEPRAISLGYKTDQYKLLAFILSGTLAGFAGALKVFVAQNASL 245

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
               +S +  ++ + ++GG+ ++        ++I + +   G                  
Sbjct: 246 TDVHWSMSGEIVLMTLVGGLGTVFGPVVGAFVIIAMQQYLAGF---------------GQ 290

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
             T +  +     +L     ++  
Sbjct: 291 WVTVIQGVIFVACVLTFRRGIVGE 314


>gi|149204642|ref|ZP_01881607.1| ABC branched-chain amino acid transporter, inner membrane subunit
           [Roseovarius sp. TM1035]
 gi|149141901|gb|EDM29951.1| ABC branched-chain amino acid transporter, inner membrane subunit
           [Roseovarius sp. TM1035]
          Length = 335

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 63/310 (20%), Positives = 123/310 (39%), Gaps = 29/310 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS      +   AY        +G S    I +  +
Sbjct: 48  FVMKLLCFALFAAAFNLLLGYTGLLSFGHSAFFGGAAYFTAHAVKEWGWSPEFGILLGVV 107

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+IMG  +++ +G Y A+ TL +S++F    ++                      
Sbjct: 108 GAAVLGLIMGAIAIRRQGIYFAMITLALSQMFFFFCLQAGFTKG--------------ED 153

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++S+ R   F    +     MYY +LG+  L   II  +  +      ++IR+N+    
Sbjct: 154 GIQSVPRGVLFGFIDLSEATNMYYFVLGVFLLGMLIIWRIVNSPFGMILKSIRENESRAT 213

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL  ++   KL+AF +S+A  G+AG   A      +     +  +  VI + +LGG+ +L
Sbjct: 214 SLGYSVARYKLAAFVMSAALTGLAGGIKALVFQFATLTDVTWQMSGEVILMTLLGGIGTL 273

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   I++ +       +F                 T +  +   + +L+    L+ 
Sbjct: 274 IGPIFGAGIVVTLQNYLATSDFPV---------------TIITGVVFMVCVLLFRRGLVG 318

Query: 342 LRTPSNFLER 351
               S    R
Sbjct: 319 EFYASRLGRR 328


>gi|22126877|ref|NP_670300.1| inner membrane ABC transporter permease [Yersinia pestis KIM 10]
 gi|21959911|gb|AAM86551.1|AE013901_12 putative inner membrane permease of ABC transporter [Yersinia
           pestis KIM 10]
          Length = 337

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 60/344 (17%), Positives = 101/344 (29%), Gaps = 27/344 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  L V+  L L           Y  ++  +IL Y + A  L +V G  GLLSL   + +
Sbjct: 4   LIALIVLPFLALLPADHPLAISTYTLTLIGKILCYAVVAIALDLVWGYAGLLSLGHGLFF 63

Query: 75  AIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           A+G Y+  +                   W  +P     S      + L  L         
Sbjct: 64  ALGGYAMGMYLMRQAAGDGLPAFMSFLSWSELPWFWSGSQYFVWALCLIVLVPGLLAFLF 123

Query: 125 ATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                    +     ++       G    +  +  +              FP S     I
Sbjct: 124 GYFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTMLGFPVSATSTRI 183

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            ++   L +   S ++ L L RT        +RD +             KL  + +S+  
Sbjct: 184 ALFLATLALLIASLALGLALARTKFGRVLTAVRDAENRLMFCGYDPKGFKLFVWTLSAVL 243

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
             +AGA +      I+P     + +I     V LGG  +L        I+ G        
Sbjct: 244 CALAGALYVPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGIVNGAKSW---- 299

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                     F  +        + +   LV L     ++ L   
Sbjct: 300 ----------FTMAMPEYWQFFLGLIFILVTLFLPKGVIGLLRR 333


>gi|261420157|ref|YP_003253839.1| urea ABC transporter permease [Geobacillus sp. Y412MC61]
 gi|319766969|ref|YP_004132470.1| urea ABC transporter permease UrtC [Geobacillus sp. Y412MC52]
 gi|261376614|gb|ACX79357.1| urea ABC transporter, permease protein UrtC [Geobacillus sp.
           Y412MC61]
 gi|317111835|gb|ADU94327.1| urea ABC transporter, permease protein UrtC [Geobacillus sp.
           Y412MC52]
          Length = 352

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/291 (17%), Positives = 94/291 (32%), Gaps = 13/291 (4%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
           +     LFL      ++  S+  + L + + A G+S++ G  G+LSL   + + +GAY  
Sbjct: 9   WLFFAALFLAPFYLTEFRLSLLGKFLCFAIVAVGISLIWGYTGILSLGHGVYFGLGAYCM 68

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +          L   +               +        AIA   +     + L    
Sbjct: 69  AMYLKLEASQGHLPDFMEWSGVRELPWFWKPFAHPMVAIAAAIALPTLLAALLSYLTFKN 128

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRF-------------FRFPSSFVIYEIFMYYVLL 188
            I      +     +    T       +             F F  S  + +I +Y++  
Sbjct: 129 RIKGVYFSLLSQAVVVVFVTLFIGKQEWTGGTNGLTNFSTVFGFSLSSPLTQIVLYWLTT 188

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
               L       L    +      IRD +     L       K+  +++S+AF G+AGA 
Sbjct: 189 ACLALIFVAARRLTSGRLGKVLIAIRDAENRVRFLGFNPTVYKVFVYSLSAAFAGVAGAL 248

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           F      ISP+M     +I ++    +GG  SL        ++        
Sbjct: 249 FVLQVGLISPEMMGIIPSIEMVLWAAVGGRQSLMGAIIGAVVMNTAKSFLS 299


>gi|110668135|ref|YP_657946.1| ABC-type branched-chain amino acid transport system, permease
           protein II [Haloquadratum walsbyi DSM 16790]
 gi|109625882|emb|CAJ52322.1| ABC-type branched-chain amino acid transport system, permease
           protein II [Haloquadratum walsbyi DSM 16790]
          Length = 438

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 122/385 (31%), Gaps = 51/385 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +  +  +     L L  G +     +  +   I++Y + A  +++  G  GL ++  V  
Sbjct: 31  LAAVYLLYLIAGLLLGYGLSGQLNSLRRLTFLIVLYSIGALVVNLHWGYSGLFNIGVVGF 90

Query: 74  YAIGAYSYVILGSRYGLS------------IWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
            A+G Y+  IL                   + + I    + +   G I  LPSL+ R DY
Sbjct: 91  MAVGVYTTTILTRPVAGQNPTGTLSGLGLSLPVAIVGGVLAAALVGYIAALPSLRLRDDY 150

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF----------- 170
            AI TL  +EI +  +   +       G  +         T  + I  F           
Sbjct: 151 FAIVTLAFAEIIRIAVKASELQEFTIFGATIGTGGGRGIRTYPNPINQFFEGTGAPIVDA 210

Query: 171 --RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                   ++        L  +      +I+ +  +      + IRD+++A  +L     
Sbjct: 211 VSSTIDGPLVSGWTFVLTLTLVLVCVLWLIIRIVESPFGRVLKGIRDDEEATTALGKNTG 270

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
             K+ +F +    +G  G  +  S+  ISP +F       +   VI+GG  S +     +
Sbjct: 271 SLKIRSFMIGCGILGFLGIIWQGSQGYISPGLFVPQLTFFIWIAVIIGGAGSNTGSIIGS 330

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSF--------------------------NMRHTT 322
            + +G + L  G         +                                +     
Sbjct: 331 ILFVGTIYLGPGYVRRLIEKFISLSGQATNFPDALGMLAGGDVSGILLYTLDQTSALRVI 390

Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347
           L  I L  ++  R   L   R    
Sbjct: 391 LTGILLIWLLKRRPDGLFGNRREMA 415


>gi|317125046|ref|YP_004099158.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Intrasporangium calvum DSM 43043]
 gi|315589134|gb|ADU48431.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Intrasporangium calvum DSM 43043]
          Length = 345

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 57/329 (17%), Positives = 111/329 (33%), Gaps = 13/329 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +     P+ L   L    +      +    L+    A    ++ G  GLLS    +  
Sbjct: 18  VLVYLPYLPIELPGVLPGRVNGPGSLQLLATCLVIAGVALSYDVLFGRTGLLSFGHALFV 77

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A G+Y   I  + + L + + I VS   +    +++G  +L+  G   A+ TL  ++   
Sbjct: 78  AAGSYLLTISLADWSLPLPVAIVVSLATTTLLALVVGGIALRVSGIAFAMVTLAFAQAAS 137

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+++      G       +R                     V +  + Y++ LG   +S
Sbjct: 138 IIVMRNPGGVTGGEEGKSLNRSAVPDL------------LVGVAHAPYRYWLALGFVVVS 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L R+   +A   IR+N+     L       KL A  V +   G+ G   A    
Sbjct: 186 FVAVTLLVRSRAGHAMAAIRENEARAAVLGFDTYRVKLLAIVVGAFLGGLGGVVHALVLG 245

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-FD 313
             SP +      + ++ +V+LGG  S         +          ++   F   L    
Sbjct: 246 GSSPHVTTTEFTLALLIMVVLGGAGSTWGALLGGFLYTYADARLVELSGAGFADALPDVA 305

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                    ++ +   +++      L  L
Sbjct: 306 QQVLAEPLFVLGLFFIVIVYFAPAGLTGL 334


>gi|237654579|ref|YP_002890893.1| urea ABC transporter permease UrtC [Thauera sp. MZ1T]
 gi|237625826|gb|ACR02516.1| urea ABC transporter, permease protein UrtC [Thauera sp. MZ1T]
          Length = 414

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/350 (12%), Positives = 98/350 (28%), Gaps = 32/350 (9%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
             +  + V    L            Y  S+  +IL Y++ A  + ++ G  G+LSL   +
Sbjct: 25  AAVAWIGVPVAHLALPESHPLHVSAYTVSLLGKILCYMVVAVAMDLIWGYAGILSLGHGL 84

Query: 73  AYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
            +A+G Y++ +                        W  +P     S +    + L     
Sbjct: 85  FFALGGYAFGMYLMRQIGRDGSYGAELPDFMVFLDWKELPWYWAGSDSLLWALFLVVALP 144

Query: 118 RGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
                                 +I            +  +  +          R      
Sbjct: 145 GLVAFVFGWFAFRSRIKGVYFSIITQALTYAAMLLFFRNETGFGGNNGFTDFKRILGHDI 204

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
           +     + ++ +   +      +  +L  +        IRD +     +    +  KL  
Sbjct: 205 TSPGMRVTLFALSAALLIACLVLGRYLVSSRFGRVLAAIRDAESRVMFIGYNPLHYKLFI 264

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           + +S+   G+AGA +      I+P     + +I +   V +GG  +L        I+   
Sbjct: 265 WTLSAMLCGLAGALYVPQVGIINPSEMSPANSIEIAVWVAVGGRGTLVGAVLGAGIVNLA 324

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             +              F          ++     +V L     ++ L  
Sbjct: 325 KSV--------------FTVYLPEYWPFVLGFLFIVVTLYLPDGVVGLWR 360


>gi|17547159|ref|NP_520561.1| amino-acid transmembrane ABC transporter protein [Ralstonia
           solanacearum GMI1000]
 gi|17429461|emb|CAD16147.1| putative amino-acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 311

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 97/305 (31%), Gaps = 6/305 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   IY + A G ++V G LG+++        IGA S +   +        L   
Sbjct: 8   IVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMIGAMSALTAINFLQKFFPNLPDW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      +     + +  + +A   L  +     ++         +    +      
Sbjct: 68  LTLVLALLFAMPVCAVVAYTIERVAYRPLRNAPRLAPLITAIGVSIVLQTLAMMIWSRNP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L              S+          ++L    +   + L + RT +  A R   +NQ+
Sbjct: 128 LTFPQLLPSSPIDIGSTGATITGKEIAIILVSLAVMTGLTLLVNRTKLGRAMRATAENQR 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +     F   + F + +A   +AG   A +       M  F   +   +  +LGG+
Sbjct: 188 VAGLMGVNPNFVISATFMIGAAMAAVAGVMMATNYGNAHFYM-GFIPGLKAFTAAVLGGI 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  L  G        +       +        I L  V+L R   
Sbjct: 247 GNLAGAMVGGVLLGLIEALGAGYIGDLTGGVFG-----SNYQDVFAFIVLICVLLFRPSG 301

Query: 339 LLRLR 343
           ++  R
Sbjct: 302 IMGER 306


>gi|227115093|ref|ZP_03828749.1| putative branched-chain amino acid transport system, permease
           component [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 362

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 95/324 (29%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
                 Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 46  PLAISTYTLTLIGKILCYAIVAIALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 105

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS---EIFQNILI 138
                      W  +P     +      + L  L                  +     ++
Sbjct: 106 EGMPAFMSFLSWTELPWFWAGTQYFVWALCLIVLVPGVLAFVFGWFAFRSKIKGVYFSIM 165

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                  G    +  +  +              FP +     I ++   + +   S  + 
Sbjct: 166 TQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPITATGTRIGLFVATVLLLIASLLVG 225

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 226 FALARSKFGRVLTAVRDAENRLMFCGYDPKGFKLFVWTLSAVLCGLAGALYVPQVGIINP 285

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        I+ G                  F  +F  
Sbjct: 286 GEMSPTNSIEAAIWVALGGRGTLIGPLLGAGIVNGAKSW--------------FTVAFPE 331

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                + +   LV L     ++ L
Sbjct: 332 YWLFFLGLMFILVTLFLPRGVIGL 355


>gi|213622187|ref|ZP_03374970.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-2068]
          Length = 242

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 81/241 (33%), Positives = 119/241 (49%), Gaps = 9/241 (3%)

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           + +L   YGL  W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + +L+  
Sbjct: 1   FALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNN 60

Query: 141 KPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
             IT G  GI    +    G             +   FF          IF+Y V L + 
Sbjct: 61  TEITGGPNGISQIPKPTLFGLEFSRNTREGGWDTFSNFFGVKYDPSDRVIFLYLVALLLV 120

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            LS  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA
Sbjct: 121 VLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAA 180

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            +  +SP+ F F+E+  V++IV+LGGM S   +  A  +L+   EL    N Y    L  
Sbjct: 181 RQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEYSMLMLGG 240

Query: 312 F 312
            
Sbjct: 241 L 241


>gi|21220491|ref|NP_626270.1| branched chain amino acid transport permease [Streptomyces
           coelicolor A3(2)]
 gi|5689902|emb|CAB52065.1| putative branched chain amino acid transport permease [Streptomyces
           coelicolor A3(2)]
          Length = 310

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 98/308 (31%), Gaps = 13/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---SYVILGSRYGLSIWLL 95
           + +  +   +Y + A G ++V G + L++      +  GA+   +  +     G S+ + 
Sbjct: 8   LVNGLLLGSMYGLVAIGYTMVYGIVQLINFAHGEIFMTGAFGALTVYMYILPDGTSMLIA 67

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +P+  + +      + + + +F    L  A  +        LI    ++        A  
Sbjct: 68  LPLMLIGAVIVSTTVAVGAERFAYRPLRGAPRLAP------LITAIGLSLALQQAVWAWY 121

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                      I    F    V  +    ++ +      A +  ++ RT      +    
Sbjct: 122 PDAKSARPFPQIDGGPFHIGNVTLQTGDIFLFVVAPVSMAILGFFVMRTRTGRGMQATAQ 181

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +      +        + AFA+ + F  + G  +     +I   M  F   +   +  +L
Sbjct: 182 DPDTAKLMGVDTDRIIVIAFALGAVFAAVGGVAYGLRYGQIEFKM-GFILGLKAFTAAVL 240

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++        +L     L                 S+      +++I + L    R
Sbjct: 241 GGIGNIYGAMIGGVVLGVAETLATAYIADVPGLDKFGSQSWADVWAFILLILVLLF---R 297

Query: 336 SHSLLRLR 343
              LL  R
Sbjct: 298 PQGLLGER 305


>gi|329911206|ref|ZP_08275460.1| LivM [Oxalobacteraceae bacterium IMCC9480]
 gi|327545984|gb|EGF31071.1| LivM [Oxalobacteraceae bacterium IMCC9480]
          Length = 289

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 62/321 (19%), Positives = 119/321 (37%), Gaps = 42/321 (13%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                    +++   I +  M A  + + + S GLLSL       IGAY+  +L  +  +
Sbjct: 3   WWQAFWSTYNTVIFSIGVNAMLALSIYLTL-SCGLLSLANAAFMGIGAYAAAMLTMQGDV 61

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S  L +  + ++     +I+G+P+L+  G YLA+ATL   E+ + I++    +T G  G+
Sbjct: 62  SFPLALLAAGVLPALVALIIGIPTLRLSGVYLAMATLGFGEVVRVIVLNL-DVTGGPMGL 120

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                                               +L +  L+  ++  +RR+ I  A+
Sbjct: 121 NGIPLKTEFWH-------------------------ILLLLALTLYVLARMRRSKIGRAF 155

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I+ ++ A   +   +   KL AF   +   G+AG   A     I P  + F   + ++
Sbjct: 156 EAIKADEVAAQLMGINVAGYKLLAFVTGAVIAGVAGGLNAHYTFTIGPGNYAFENAVDIL 215

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           ++ + GG  +L        IL  + E+      +                     + L +
Sbjct: 216 TMAVFGGTANLIGPTLGATILTLLPEVLREFKHF---------------RLAFNGLILIV 260

Query: 331 VILMRSHSLLRLRTPSNFLER 351
           VIL     +          +R
Sbjct: 261 VILYLPKGIWDPARMRALFKR 281


>gi|206977466|ref|ZP_03238361.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus H3081.97]
 gi|206744316|gb|EDZ55728.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus H3081.97]
          Length = 333

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 60/325 (18%), Positives = 128/325 (39%), Gaps = 31/325 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 15  VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  R      +  + I  + +IS     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 75  VALLFDRQGVSITNFLIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YYV L    +   +
Sbjct: 135 EKWRGLTHGGDGFTFGVPEVFRDRF-------------------TFYYVTLICLLIIFVL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L  +    
Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
            R T ++ +   +V+L+    L+  
Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGT 311


>gi|167584633|ref|ZP_02377021.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia ubonensis Bu]
          Length = 308

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G S+V G +G+++      Y IGAY  ++  +           L
Sbjct: 12  LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGVSAGYPLPL 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS +++G  G  +   + +       +  LI +      L  +  I  G    
Sbjct: 72  VLGAALIVSVLVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +             V        ++     L  ++ L++  + +  A 
Sbjct: 129 ----RDVSVPVLISGAFDIHLGGDFDVTVPYARLLIVCVTIALMIALTLFISHSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +    + G     +  +++P    F   I   
Sbjct: 185 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L        G     +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|221070046|ref|ZP_03546151.1| urea ABC transporter, permease protein UrtC [Comamonas testosteroni
           KF-1]
 gi|220715069|gb|EED70437.1| urea ABC transporter, permease protein UrtC [Comamonas testosteroni
           KF-1]
          Length = 409

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 51/351 (14%), Positives = 100/351 (28%), Gaps = 33/351 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLG-----ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +   L  L +V  +   L L            Y+  +  + + Y + A  + ++ G  G+
Sbjct: 29  WTAFLLALTMVCAVAPALNLWVPEDSTLHLSDYMLGLLGKFMCYAICALAIDLIWGYTGI 88

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSI-----------WLLIPVSAMISGACGMIMGLPS 114
           LSL   + +A+G Y   +   R                W  +P    +SG+    + L  
Sbjct: 89  LSLGHGLFFALGGYVMGMYLMREAAGPDALPAFMGFLDWKELPWHWALSGSFAATVLLVF 148

Query: 115 LKFRGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           L                        +I            +  +  +              
Sbjct: 149 LVPGLIGGLFGYFAFRSRIKGVYFSIITQALTYAAMLLFFRNETGFGGNNGFTGFKTLLG 208

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F  +     + ++ +             WL R+      + +RD +          +  K
Sbjct: 209 FSVNSQAMHVLLFALSGLALLGCFLFSRWLMRSKYGRVLQAVRDAESRTMFCGYNPLPYK 268

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           LS + +S+   G+AGA +      I+P       +I +     +GG  SL         +
Sbjct: 269 LSIWVISAMMCGLAGALYVPQVGIINPSEMSVGNSIEMAVWTAVGGRASLVGPIIGAFAV 328

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            G                     +       ++     +V L     L+RL
Sbjct: 329 NGGKSWLT--------------VAAPEYWLYVLGALFIVVTLFMPGGLIRL 365


>gi|76811037|ref|YP_334501.1| putative branched-chain amino acid transport system, permease
           component [Burkholderia pseudomallei 1710b]
 gi|167739818|ref|ZP_02412592.1| putative branched-chain amino acid transport system, permease
           component [Burkholderia pseudomallei 14]
 gi|254260862|ref|ZP_04951916.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
 gi|76580490|gb|ABA49965.1| putative branched-chain amino acid transport system, permease
           component [Burkholderia pseudomallei 1710b]
 gi|254219551|gb|EET08935.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
          Length = 400

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 94/347 (27%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 57  IAVGVGVPLAALVAPEASAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 116

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 117 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPA 176

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            Y  +  +          R   F  +
Sbjct: 177 ALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 236

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +          S      +  + +      IRD +     L  + +  KL  +
Sbjct: 237 SPGTRTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 296

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+    +AGA +      I+P       +I +   V +GG  +L        ++ G  
Sbjct: 297 VVSAVLCAIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFVVNGAK 356

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +                  F       + +   LV L+    ++ L
Sbjct: 357 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 389


>gi|217421225|ref|ZP_03452730.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
 gi|217396637|gb|EEC36654.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
          Length = 400

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 93/347 (26%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 57  IAVGVGVPLAALVAPEASAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 116

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 117 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPA 176

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            Y  +  +          R   F  +
Sbjct: 177 ALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 236

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +          S      +  + +      IRD +     L  + +  KL  +
Sbjct: 237 SPGTRTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 296

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+    +AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 297 VVSAVLCAIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 356

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +                  F       + +   LV L+    ++ L
Sbjct: 357 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 389


>gi|299065963|emb|CBJ37144.1| leucine/isoleucine/valine transporter subunit ; membrane component
           of ABC superfamily [Ralstonia solanacearum CMR15]
          Length = 311

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 97/305 (31%), Gaps = 6/305 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   IY + A G ++V G LG+++        IGA S +   +        L   
Sbjct: 8   IVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMIGAMSALTAINFLQKFFPHLPDW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      +     + +  + +A   L  +     ++         +    +      
Sbjct: 68  LTLVLALLFAMPVCAVVAYTIERVAYRPLRNAPRLAPLITAIGVSIVLQTLAMMIWSRNP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L              S+          ++L    +   + L + RT +  A R   +NQ+
Sbjct: 128 LTFPQLLPSSPIDIGSTGATITGKEIAIILVSLAVMTGLTLLVNRTKLGRAMRATAENQR 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +     F   + F + +A   +AG   A +       M  F   +   +  +LGG+
Sbjct: 188 VAGLMGVNPNFVISATFMIGAAMAAVAGVMMATNYGNAHFYM-GFIPGLKAFTAAVLGGI 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  L  G        +       +        I L  V+L R   
Sbjct: 247 GNLAGAMVGGVLLGLIEALGAGYIGDLTGGVFG-----SNYQDVFAFIVLIGVLLFRPSG 301

Query: 339 LLRLR 343
           ++  R
Sbjct: 302 IMGER 306


>gi|293604940|ref|ZP_06687337.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292816768|gb|EFF75852.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 322

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 61/328 (18%), Positives = 125/328 (38%), Gaps = 29/328 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L A+    +    L        + +  +  L   + +   +I+ G  G LS    + + +
Sbjct: 5   LCAIALFGVALAVLATVAQSGVLLTFVMMSLYAALLSQAWNILGGYGGQLSFGHALFFGV 64

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQ 134
           GAY+  +    +G++ WL++P++  +  A G+ +G  + +   +G Y A+ TL  +E+F+
Sbjct: 65  GAYAQALGQLNFGINPWLVLPLAIALGAATGLGVGGLTFRYGLKGSYFALVTLAFAEVFR 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +       G   +                       +          Y+LL    L+
Sbjct: 125 ILALSASFTGGGVGLMVPLQ---------------EGAANMQFGSRRGYIYLLLAFVVLA 169

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +   WLR +      + +RDN+ A  ++    +  KL   A+S+AF+  AGAF+     
Sbjct: 170 LAATAWLRHSRFGAYLQAVRDNEDAARAIGVNPLRVKLGGIALSAAFMSAAGAFYVQVFQ 229

Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
            I P   F  + ++  +   I+GGM +L         L G+ +L   +            
Sbjct: 230 YIDPGIAFGSAVSVEALVGAIVGGMGTLWGPVLGAVALHGLADLTRNLFG---------- 279

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    +  + L L+++     +  
Sbjct: 280 -ELPGISMVIYGVVLILIVMFLPRGISG 306


>gi|239945492|ref|ZP_04697429.1| putative D-ribose ABC transporter substrate-binding/permease
           protein [Streptomyces roseosporus NRRL 15998]
 gi|239991957|ref|ZP_04712621.1| putative D-ribose ABC transporter substrate-binding/permease
           protein [Streptomyces roseosporus NRRL 11379]
 gi|291448949|ref|ZP_06588339.1| D-ribose ABC transporter permease protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291351896|gb|EFE78800.1| D-ribose ABC transporter permease protein [Streptomyces roseosporus
           NRRL 15998]
          Length = 651

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 104/310 (33%), Gaps = 27/310 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             VV  + + L  G   + + + ++G+Q  +  + A+G++ V+ S G + L+     A+ 
Sbjct: 30  ALVVLVVAMSLLSGDFLTTQNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVAALS 88

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A       +  G+ + L + ++ +   ACG + G      +         ++        
Sbjct: 89  ATVLAWSATSAGVPVVLAVVLAIVTGIACGFVNGALISYGKLPPFIATLAML-------- 140

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                         +A  L  + +    +               ++   +L M  +    
Sbjct: 141 -------------SIARGLSLVISQGSPIAFPESVSRLGDTLGGWLPVPVLVMIAMGLVT 187

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L L RT I  +   I  N++A       +   K+  +A+S  F  +AG   A+      
Sbjct: 188 ALILGRTFIGRSMYAIGGNEEAARLSGLRVKRQKIVIYALSGLFAAVAGIVLASRLVSAQ 247

Query: 258 PDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           P   +  E   + ++VI      GG+   S       IL  +      ++   F   +  
Sbjct: 248 PQAAQGYELDAIAAVVIGGASLAGGVGKASGTLIGALILAVLRNGLNLLSVSAFWQQVVI 307

Query: 313 DCSFNMRHTT 322
                +    
Sbjct: 308 GVVIALAVLL 317


>gi|259048103|ref|ZP_05738504.1| high-affinity branched-chain amino acid ABC superfamily ATP binding
           cassette transporter, permease protein LivH
           [Granulicatella adiacens ATCC 49175]
 gi|259035164|gb|EEW36419.1| high-affinity branched-chain amino acid ABC superfamily ATP binding
           cassette transporter, permease protein LivH
           [Granulicatella adiacens ATCC 49175]
          Length = 293

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 97/288 (33%), Gaps = 11/288 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G++ L++      Y +GA+          L+I+L + +
Sbjct: 8   LVNGLAVGSIYALIALGYTMVYGTIKLINFAHGDVYMMGAFIGYFAVMVLKLNIFLALLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+++   + K       +A LI +     +L        G            
Sbjct: 68  AMVACAVLGVVIERVAYKPLRKSTRVAALITAIGVSYLLENVMSYFFGAESRPFPSDFGT 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+   I             I +           A +   +R T +  A R +  +++
Sbjct: 128 ETFTLFGDISVNGKQILIFGITILL----------MALLQFIVRYTKMGKAMRAVAVDEQ 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G+AG       + IS  M   +  +      +LGG+
Sbjct: 178 AAQLMGIDVDGVISFTFALGSALAGIAGVLVGIYYNTISTTM-GITVGLKAFVAAVLGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            S+        ++  +  +     +  +   + +   F +       +
Sbjct: 237 GSIPGAMVGGYLIGLLETMVSFFGYSPYRDGVVYLLLFIILIVLPAGL 284


>gi|157147156|ref|YP_001454475.1| hypothetical protein CKO_02933 [Citrobacter koseri ATCC BAA-895]
 gi|157084361|gb|ABV14039.1| hypothetical protein CKO_02933 [Citrobacter koseri ATCC BAA-895]
          Length = 329

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 100/310 (32%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS-----YVILGSRYGLSIW 93
           + +  +   IY + A G ++V G L +++        +GA +      V+  +   +   
Sbjct: 21  LINGVMLGSIYALIALGYTMVYGILRIINFAHGDILMVGALTTLSAINVLNHTFPAMPQL 80

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L + V+ +I+ A   ++ +   +F    L  A  +   I    +                
Sbjct: 81  LQLGVALLIAMAVCALLAMAVERFAYRRLRNAPRLAPLISGIGVSVLLQTVAMIVWTRNP 140

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                + +     +          I  +     +     +   + L +  T +    R +
Sbjct: 141 LMFPQILSMAPIAVTSGGETHPPAIITLTGIVTVGLALAVMTGLWLLVEYTRLGRGMRAV 200

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N +    +           FA+   F  +AG   A++    S  M  F   I   +  
Sbjct: 201 AENPRVATLMGVNPNAIITLTFAIGGIFAALAGVMMASNYGNASFSM-GFLPGIKAFTAA 259

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ ++        +L  +  L  G      N +       +        I L LV++
Sbjct: 260 VLGGIGNIRGAMIGGILLGVIEALGAGYLGELTNGVFG-----SNYQDVFAFIVLILVLV 314

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 315 FRPAGLLGER 324


>gi|121535364|ref|ZP_01667176.1| inner-membrane translocator [Thermosinus carboxydivorans Nor1]
 gi|121306056|gb|EAX46986.1| inner-membrane translocator [Thermosinus carboxydivorans Nor1]
          Length = 298

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 90/289 (31%), Gaps = 12/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GAY+     + +       +  
Sbjct: 14  LINGISLGSIYALIALGYTMVYGIIRLINFAHGDIYMLGAYAGFFATTVFKWPFIPSLVF 73

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  ++ A G+I+   + +       IA LI +     +L                  +  
Sbjct: 74  AMAVAAAAGIIIERAAYRPLRHAPKIAVLITAIGISLLLE-----------YGGILLVTP 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T  ++     +    ++       +L     L   +   + RT +  A R +  +  
Sbjct: 123 QPRTFPAVFPAELYHFGGLVVNNQQIVILTVSLILMVVLTYVVNRTKVGKAMRAVSYDTD 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S+    AG       + I P M      +      +LGG+
Sbjct: 183 AARLMGIDVDRIISVTFAIGSSLAAAAGVLVGVYYNSIDPLM-GIMPGLKAFVAAVLGGI 241

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +        I+  +  L  G     F     F     +       + 
Sbjct: 242 GIIPGAMLGGIIMGIIEALVSGFISSTFRDAAAFAILIIILLFKPSGLL 290


>gi|89093399|ref|ZP_01166348.1| possible ABC transporter, permease protein precursor
           [Oceanospirillum sp. MED92]
 gi|89082378|gb|EAR61601.1| possible ABC transporter, permease protein precursor
           [Oceanospirillum sp. MED92]
          Length = 309

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 57/300 (19%), Positives = 109/300 (36%), Gaps = 27/300 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
              ++L + +FA   ++++G +GLLS         G Y    L    GL+  L I     
Sbjct: 26  FLAKVLCFALFACAFNLLLGFVGLLSFGHAAFLGTGGYITGHLMINSGLTPELAILTGTA 85

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
              A G + G  ++K  G Y A+ TL ++++   I ++    TNG+ G+    R      
Sbjct: 86  AGAALGALFGKLAVKREGIYFAMVTLALAQLVFFIYLQAP-FTNGEDGMQGVPR------ 138

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F    +   + MYY +L +      +I     +      + IRDN+    
Sbjct: 139 -------GEAFGLIDLSDNLTMYYFVLAIFVFGYWVINRTVHSPFGQILKAIRDNEDRAT 191

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   K  AF +S+A   +AG+         S     +  +  VI + ++GG+ ++
Sbjct: 192 SLGYDVNRYKWIAFVISAALAALAGSTKTLVFQLASLTDVHWHMSGEVILMTLVGGVGTI 251

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    ++ +     G                      +M +   + +L     ++ 
Sbjct: 252 FGPVIGAGFIVTMQNYLSG-------------GELGNYIHIIMGVVFVICVLSFRSGIVG 298


>gi|148258283|ref|YP_001242868.1| putative high-affinity branched-chain amino acid transport system
           permease livM [Bradyrhizobium sp. BTAi1]
 gi|146410456|gb|ABQ38962.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 338

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 73/304 (24%), Positives = 127/304 (41%), Gaps = 30/304 (9%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +I      +LIY +    L+I+ G  G  SL     YA+GAY+  IL  +Y ++  L +
Sbjct: 45  NFIIFQMTMLLIYGLAVLALNILTGGSGQFSLGQSAFYAVGAYTSAILMEQYNINYALTL 104

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI--KWKPITNGKAGIYVAD 154
           PV+ ++    G + G P+L+  G YLA+AT  ++     IL    ++  T G  G+ V  
Sbjct: 105 PVAGVVCFGFGFLFGQPALRLSGVYLALATFALATAMPQILKLGFFEHWTGGVQGLVVTK 164

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                G  +   +               +YY  L +        + L R+    A+  IR
Sbjct: 165 PDAPFGLPMSQDMW--------------LYYFTLAITIAIYIFSVNLLRSRSGRAFMAIR 210

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           DN+ A  ++   +   K  AF VS+   G+AG   A +   ++PD +     I +   ++
Sbjct: 211 DNEIAASAMGIDVATYKTLAFGVSAGITGVAGGLGAIAVQFVAPDSYTIVLAISLFLGMV 270

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +GG+  L       A +I V  +  G++     +              +  + LFL+I +
Sbjct: 271 VGGVGWLPGSFIGAAFIIFVPNIAEGISKGLSGA--------------VFGVLLFLIIFL 316

Query: 335 RSHS 338
             H 
Sbjct: 317 VPHG 320


>gi|107021987|ref|YP_620314.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054]
 gi|116688931|ref|YP_834554.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
 gi|105892176|gb|ABF75341.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116647020|gb|ABK07661.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 395

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/347 (13%), Positives = 96/347 (27%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 52  VAIGIGVPLAALVAPEASAFHLSAYTMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 111

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 112 FALGGYAIGMYLMREIGRDGKYGSDLPDFMVFLDWHQLPWYWSGTQHLAWALALVVLVPA 171

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            Y  +  +          R   F  +
Sbjct: 172 VLAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 231

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +  +   +  L+      +  + +      +RD +     L  + +  KL  +
Sbjct: 232 SPGTRTVLLLLTFAILVLAFIAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 291

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+   G+AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 292 TVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 351

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                               F       + +   LV L+    ++ L
Sbjct: 352 SFFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGL 384


>gi|260597974|ref|YP_003210545.1| hypothetical protein CTU_21820 [Cronobacter turicensis z3032]
 gi|260217151|emb|CBA30971.1| hypothetical protein CTU_21820 [Cronobacter turicensis z3032]
          Length = 357

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 53/333 (15%), Positives = 96/333 (28%), Gaps = 27/333 (8%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL- 84
           L           +  ++  +IL Y + A  L +V G  GLLSL   I +A+G Y+  +  
Sbjct: 36  LLPASHPLAVSTWTLTLMGKILCYAIVAVALDLVWGYAGLLSLGHGIFFALGGYAMGMYL 95

Query: 85  ------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
                        S    S                +++ L        +   A     + 
Sbjct: 96  MRQAAGDGLPAFMSFLSWSELPWYWWGTSNFLWALLLVVLVPGLLALVFGFFAFRSKIKG 155

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
               +I       G    +  +  +              F  +     I ++   L +  
Sbjct: 156 VYFSIITQALTFAGMLLFFRNETGFGGNNGFTGFTTLLGFSLTAAGTRIALFIATLALLL 215

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
              ++ LWL R+        +RD +             KL  + +S+   G+AGA +   
Sbjct: 216 ACLAVGLWLARSKFGRVLTAVRDAESRLMFCGYDPRGFKLLVWTISAVMCGLAGALYVPQ 275

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              I+P     + +I     V LGG  +L        ++ G   L              F
Sbjct: 276 VGIINPGEMSPTNSIEAAIWVALGGRGTLVGPVFGALLVNGAKSL--------------F 321

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      + +   L+ L     +  L   
Sbjct: 322 TVVMPEYWQLFLGLIFILITLFLPRGVAGLLRR 354


>gi|254427787|ref|ZP_05041494.1| amino acid or sugar ABC transport system, permease protein,
           putative [Alcanivorax sp. DG881]
 gi|196193956|gb|EDX88915.1| amino acid or sugar ABC transport system, permease protein,
           putative [Alcanivorax sp. DG881]
          Length = 386

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/353 (14%), Positives = 103/353 (29%), Gaps = 35/353 (9%)

Query: 11  YDKILCLLAVVYPLL--LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           +  +L    ++  +L  LF    A     Y  ++  + L Y + A  L +V G  G+LSL
Sbjct: 18  FMGVLFGATLLVTVLNQLFPADSALHVSAYTVTLLGKYLCYALLALALDLVWGYCGILSL 77

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                +A+G Y+  +   R      +                 LP      D    A L+
Sbjct: 78  GHGAFFALGGYAMGMYLMRQIGDRGVYGNPELPDFMVFLNWSELPWYWQGFDQFWFAALM 137

Query: 129 MSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRF 169
           +  +   +   +  +                          +  +  +     +      
Sbjct: 138 ILLVPGLLAFVFGWLAFRSRVTGVYLSIITQALTYALMLAFFRNELGFGGNNGLTDFKDL 197

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
             F        + +          +  +  W+  + +      +RD +     +      
Sbjct: 198 LGFSLQSDATRVGLLMATAVALAGAFVLCRWITGSKLGRVVLAVRDAESRARFVGYRTEH 257

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            KL  F +S+   G+AGA +      I+P  F    +I ++  V +GG  +L        
Sbjct: 258 YKLWIFTLSAILAGIAGALYVPQVGIINPGEFSPLNSIELVVWVAVGGRATLYGAVIGAI 317

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           ++     +  G+                      +      V +   H L+ L
Sbjct: 318 LVNYGKTVFTGI--------------MPEAWLFALGGLFVAVTVFLPHGLVGL 356


>gi|152986754|ref|YP_001350902.1| urea ABC transporter permease UrtC [Pseudomonas aeruginosa PA7]
 gi|150961912|gb|ABR83937.1| urea ABC transporter, permease protein UrtC [Pseudomonas aeruginosa
           PA7]
          Length = 359

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 53/319 (16%), Positives = 94/319 (29%), Gaps = 13/319 (4%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
               +L  +  L L     A     Y  ++  +IL Y + A  L +V G  GLLSL   +
Sbjct: 24  AAFAVLLAMPLLHLLPADSALHVSAYSLTLTGKILCYAIVALALDLVWGYAGLLSLGHGL 83

Query: 73  AYAIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            +A+G Y+  +                   W  +P     +      + L  L       
Sbjct: 84  FFALGGYAMGMYLMRQAAGDSLPAFMSFLSWNELPWYWAGTQHFLWALCLVVLVPGALAF 143

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIY 179
                      + +           AG+ +  R    +              FP +    
Sbjct: 144 VFGYFAFRSRIRGVYFSIMTQALTFAGMLLFFRNETGFGGNNGFTDFRSILGFPITAPGT 203

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              ++   + +   S  +   L R+        +RD +             KL  + +S+
Sbjct: 204 RAALFLATVALLAASLLLGWRLARSKFGRVLTALRDAENRLMFCGYDPRGYKLFVWTLSA 263

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
              G+AGA F      ++P     + +I     V LGG  +L        ++ G      
Sbjct: 264 VLCGLAGALFVPQVGIVNPSEMSPTNSIEAAVWVALGGRGTLLGPLLGAGVVNGAKSWFT 323

Query: 300 GMNFYYFNSLLKFDCSFNM 318
                Y+   L     F  
Sbjct: 324 VAFPEYWLFFLGALFIFVT 342


>gi|86748379|ref|YP_484875.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86571407|gb|ABD05964.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 383

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/328 (14%), Positives = 95/328 (28%), Gaps = 36/328 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             +  ++  + L Y   A GL +  G  G+LSL   + + +G Y   +       S+   
Sbjct: 31  DVFRLNLVAKYLTYAFVALGLVLCWGFGGILSLGQGVFFGLGGYGMAMYLKLEASSVANT 90

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF---------------------- 133
              S            +  L          TL +  I                       
Sbjct: 91  KIQSTPGIPDFMDWNQITQLPLFWQPFHSLTLTILAILIVPTLFAYLIGAAMFKRRVGGV 150

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
              +I           I            +  L     +       ++ +Y+V +   F 
Sbjct: 151 YFAIITQAIAAILTILIIGQQGYTGGINGITDLRTLKGWDIRPDHAKVVLYFVEVAFLFG 210

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              + L++R + +      +R+ +        ++   K+ AF +++ F  + GA F  + 
Sbjct: 211 CILLALFVRHSKLGRILVAMREKEDRVRFSGYSVANFKIFAFCLAAMFAAIGGAMFTLNV 270

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             +SP       +I ++    +GG  S+      T ++                      
Sbjct: 271 GFMSPSFVGIVPSIEMVIYTAVGGRLSIFGAIYGTLLVNFAKTSLSE------------- 317

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
            SF       +      V+L+  + L  
Sbjct: 318 -SFPQLWLFGLGALFIAVVLIFPNGLAG 344


>gi|320321857|gb|EFW77953.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraD [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320331036|gb|EFW87010.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraD [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330872280|gb|EGH06429.1| high-affinity branched-chain amino acid ABC transporter permease
           BraD [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 304

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 85/304 (27%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P 
Sbjct: 9   MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGLESFPF 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +      F   S FV       ++L+        +   ++ T +    R  + ++K
Sbjct: 129 GVPMLLEGAWRFEIGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL        G+    +  +  F               L L+++ R   
Sbjct: 248 GSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFG-------------LLVLILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|158424417|ref|YP_001525709.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158331306|dbj|BAF88791.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 659

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 55/310 (17%), Positives = 123/310 (39%), Gaps = 33/310 (10%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 Y+ ++G +IL++V+FA  L  ++   GL S      + +GAY    +    G S
Sbjct: 351 PLFLGNYMLTVGSEILVFVLFAASLHFLMTVGGLSSFGHAAYFGLGAYGAAFMVKLAGAS 410

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + + + V   +  A  ++ G  +++  G Y A+ TL  ++I  +I  +W  +T G  G+ 
Sbjct: 411 MVVALLVGPFMGLAGAVLFGWFAVRLSGVYFAMLTLAFAQITWSIAFQWVEVTGGDNGML 470

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                               +P+S+       +++ LG+  +  +++  L  +      R
Sbjct: 471 GI------------------WPASWASSPQGFFWLTLGVVAIGVAVLRMLVFSPFGFGLR 512

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
             RD+     ++       + +AF V+  F G+AGA F   +  + P+      ++  + 
Sbjct: 513 AARDSALRSEAIGIDRKNVQWAAFVVAGTFAGVAGALFGFLKGSVFPENLAIPTSVDGLV 572

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +V+LGG+ ++S       +   +                    S       ++   + L+
Sbjct: 573 MVLLGGIETVSGAVVGAIVYKALAIWL---------------MSKTELSKLVLGGVIVLL 617

Query: 332 ILMRSHSLLR 341
           ++     ++ 
Sbjct: 618 VVAFPKGIVG 627



 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 92/307 (29%), Gaps = 28/307 (9%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLIP 97
            +         + A GLSI+ G   +++      Y +GAY            L  W  I 
Sbjct: 35  LTGLASAASLFLVASGLSIIFGVTRIVNFAHGAFYMLGAYIAFTLTEALSGTLGFWGGIV 94

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           ++A+I    G  + +  L+       +  L+ +     ++     +  G           
Sbjct: 95  LAALIVAVLGAALEIVLLRRIYRAPELFQLLATFGVTLMVQDIVILIWGP---------- 144

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                 R+            +   +   ++     +   + L   RT      R    ++
Sbjct: 145 EDLMGRRAPGFRGAVDIMGQMVPAYDLLLIGLGPAVLGVLWLIFHRTRWGVLVRAATQDR 204

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +L     +   S FA+     G+ GA              +   ++ V+ ++    
Sbjct: 205 DMVAALGVNQKWLFTSVFALGVFLAGLGGALQIPRDAVSHAMDLRVIVDVFVVVVIGG-- 262

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S++    A  ++  +      +              F      L+ I + +V+++R +
Sbjct: 263 LGSVTGAFVAAILVSELNAFGILI--------------FPKISLVLVFIVMAVVLVIRPY 308

Query: 338 SLLRLRT 344
            L     
Sbjct: 309 GLFGKAE 315


>gi|238026427|ref|YP_002910658.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia glumae BGR1]
 gi|237875621|gb|ACR27954.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia glumae BGR1]
          Length = 392

 Score = 85.3 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 51/347 (14%), Positives = 103/347 (29%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   + V    L+     A     Y  ++  + + Y + A  L +V G  G+LSL   + 
Sbjct: 49  LAIGVGVPLAALVAPETSAFHLSAYAMTIAGKFMCYAIGALALDLVWGYCGILSLGHGLF 108

Query: 74  YAIGAYSYVILGSRYGLS----------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           +A+G Y+  +   R                + +   ++     G      +L       A
Sbjct: 109 FALGGYAIGMYLMREIGHDGVYGSSLPDFMVFLNWKSLPWYWHGSDHLAVALALVVLAPA 168

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT--------VRSLIRFFRFPSS 175
           +   +         +K   ++     +  A  L F                 R   F  +
Sbjct: 169 VVAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRIAGFGIT 228

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +  +      L+      +  + +      +RD +     L  + +  KL  +
Sbjct: 229 SPGTRTVLLLLTFATLVLAFVAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 288

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+   G+AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 289 TVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPILGAFAVNGAK 348

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                               F       + +   LV L+    ++ L
Sbjct: 349 SFFTAY--------------FAEYWLFFLGLIFVLVPLLMPRGIVGL 381


>gi|260568302|ref|ZP_05838771.1| branched-chain amino acid ABC transporter [Brucella suis bv. 4 str.
           40]
 gi|260154967|gb|EEW90048.1| branched-chain amino acid ABC transporter [Brucella suis bv. 4 str.
           40]
          Length = 519

 Score = 84.9 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 102/251 (40%), Gaps = 25/251 (9%)

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            W  + + A I+   GM++  P  + +G + ++A++   E+F+ + + +  +T G  G+ 
Sbjct: 5   PWFSMFIGAFIAALVGMVISYPCFRLKGPFYSLASIAFLEVFRVLALHFGWLTGGATGLM 64

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           +  +L ++    R                     ++ GM  ++ +I   +RR+ +     
Sbjct: 65  IQLKLGWVWIVFRERW--------------PSLLIVFGMLLVTLAITWAVRRSRLGFYLV 110

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENIIVI 270
             R+ + A  +     +  +L A A+SSA   M G F A     I P  MF  + +I + 
Sbjct: 111 ATRERESAARAAGVRTVRVRLIAVAISSALCAMLGTFHAMYLTFIEPAAMFSLAFSIQIA 170

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
              ++GG+ +++       +L+ + E            L  F          +  + L L
Sbjct: 171 MFALIGGLGTVAGPLLGAVLLVPITEWARASLGASALGLHGF----------VYGLVLIL 220

Query: 331 VILMRSHSLLR 341
           V+L   + ++ 
Sbjct: 221 VVLFMPNGIMG 231


>gi|229172655|ref|ZP_04300213.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus MM3]
 gi|228610787|gb|EEK68051.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus MM3]
          Length = 333

 Score = 84.9 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 60/334 (17%), Positives = 131/334 (39%), Gaps = 31/334 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V+ L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 15  VFMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  R      +  + I  + +IS     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 75  VALLFDRQGVSITNFLIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YYV L    +   +
Sbjct: 135 EKWRGLTHGGDGFTFGVPDLFRDRF-------------------NFYYVTLICLIVIFIL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVATISGGLFVITLRFVN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L       
Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATAYPIF 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            R T ++ +   +V+L+    L+        +++
Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGTIKRLKNVKQ 320


>gi|152970169|ref|YP_001335278.1| high-affinity branched-chain amino acid ABC transporter membrane
           protein [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|150955018|gb|ABR77048.1| high-affinity branched-chain amino acid transport protein (ABC
           superfamily, membrane) [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 524

 Score = 84.9 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 89/296 (30%), Gaps = 33/296 (11%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGLSIWLLIPVSAMISGACGMI 109
           I  G LG++++       IGAYS  ++                 + +PV+ +++   GM 
Sbjct: 251 ITYGLLGVINMAHGEMLMIGAYSCWLVQQALAQLAPQWLAFYPLVALPVAFLVTAGIGMA 310

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           +    ++          L    I   ++   + +   +               +   ++ 
Sbjct: 311 LERTIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNVEVANPA------WLSGGVQV 364

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                        + +VLL +CF    +     RT +    R +  N+            
Sbjct: 365 LPNLILPWNRLAVLAFVLLVLCFTWLIL----NRTRLGMNVRAVTQNRAMAACCGVPTGR 420

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
             + AF + S   G+ G   +   +            I    +V+LGG+  L+    A  
Sbjct: 421 VDMLAFGLGSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVAAAF 478

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
            L    ++                         L+++ + L I  R   L  L+  
Sbjct: 479 GLGIFNKILEPQMGAVLGK-------------ILILVMIILFIQKRPQGLFALKGR 521


>gi|115525057|ref|YP_781968.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115519004|gb|ABJ06988.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 322

 Score = 84.9 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/287 (17%), Positives = 109/287 (37%), Gaps = 15/287 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            + + ++    +    +  Y   +  Q L + + A   ++++G  GLLS    +      
Sbjct: 20  MIAFAIMTLALMVVPFTGVYPFFVM-QGLCFALLACAFNLLIGYGGLLSFGHAMFLGTAG 78

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y        +GL   L I    + +G  G++ GL +++ +G Y A+ TL +S++   I +
Sbjct: 79  YVTAHGLKVWGLPPELGILAGTLAAGGLGIVTGLIAIRRQGIYFAMITLALSQLLYFIYL 138

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +                       ++ + +   F    +     +YYV+L        +I
Sbjct: 139 QA--------------PFTHGEDGIQGIPQGHLFGFINLANSTTLYYVILAGFLFGFLVI 184

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
                +      + IR+N+    SL       KL AF +S+   G AG+         S 
Sbjct: 185 YRAINSPFGEVLKAIRENEPRAISLGYKTEQYKLMAFILSATLAGFAGSLKVFVAQNASL 244

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
               ++ +  ++ + ++GG+ ++        ++I + +   G   + 
Sbjct: 245 TDVHWTMSGEIVLMTLVGGLGTVFGPVVGAFVIIAMQQYLAGFGQWV 291


>gi|290509620|ref|ZP_06548991.1| branched-chain amino acid transport system permease [Klebsiella sp.
           1_1_55]
 gi|289779014|gb|EFD87011.1| branched-chain amino acid transport system permease [Klebsiella sp.
           1_1_55]
          Length = 524

 Score = 84.9 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 89/296 (30%), Gaps = 33/296 (11%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGLSIWLLIPVSAMISGACGMI 109
           I  G LG++++       IGAYS  ++                 + +PV+ +++   GM 
Sbjct: 251 ITYGLLGVINMAHGEMLMIGAYSCWLVQQALAQLAPQWLAFYPLVALPVAFLVTAGIGMA 310

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           +    ++          L    I   ++   + +   +               +   ++ 
Sbjct: 311 LERTIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNVEVANPA------WLSGGVQV 364

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                        + +VLL +CF    +     RT +    R +  N+            
Sbjct: 365 LPNLILPWNRLAVLAFVLLVLCFTWLIL----NRTRLGMNVRAVTQNRAMAACCGVPTGR 420

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
             + AF + S   G+ G   +   +            I    +V+LGG+  L+    A  
Sbjct: 421 VDMLAFGLGSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVAAAF 478

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
            L    ++                         L+++ + L I  R   L  L+  
Sbjct: 479 GLGIFNKILEPQMGAVLGK-------------ILILVMIILFIQKRPQGLFALKGR 521


>gi|22537721|ref|NP_688572.1| branched-chain amino acid ABC transporter permease [Streptococcus
           agalactiae 2603V/R]
 gi|76786749|ref|YP_330201.1| hydrophobic amino acid uptake ABC transporter permease LivH
           [Streptococcus agalactiae A909]
 gi|22534610|gb|AAN00445.1|AE014263_24 branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae 2603V/R]
 gi|76561806|gb|ABA44390.1| hydrophobic amino acid uptake (HAAT) family ABC transporter,
           permease protein LivH [Streptococcus agalactiae A909]
          Length = 289

 Score = 84.9 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 103/303 (33%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   IY + A G ++V G + L++      Y +GA+    L +   L+ +L + +
Sbjct: 5   LVNGLILGSIYALLALGYTMVYGIIKLINFAHGDIYMMGAFMGYYLINHLHLNFFLALLI 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + S   G+++   + +       IA LI +     +L        G            
Sbjct: 65  AMLGSAFLGVVIEYLAYRPLRKSTRIAALITAIGVSFLLEYGMVYLVGAD---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I   ++    +        +L     L  ++   +++T +  A R +  +  
Sbjct: 115 -TRAFPQAIHTVKYNLGPITITNVQLIILGIALLLMLTLQFIVQKTKMGKAMRALSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G  G       + + P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAGGVLIGLYYNSVQPLM-GVTPGLKAFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +  L   +               +     ++   L L+ L+R   
Sbjct: 233 GIIPGAAIGGFVIGILETLATALG-------------VSDFRDGIVYAILILIFLIRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|241763043|ref|ZP_04761104.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
 gi|241367826|gb|EER62058.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
          Length = 327

 Score = 84.9 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 61/328 (18%), Positives = 119/328 (36%), Gaps = 34/328 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V   L+      +  + +     + I I+ + A  + +  G  G+LS+      +IGA
Sbjct: 12  VLVLLALVIAGTLLSWGRPFWLDNSVMIGIFALMALSVGLCYGQAGILSMATAAFASIGA 71

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           +   IL +RYG S WL +P + ++       +     +     L+IAT ++S +F+  + 
Sbjct: 72  FGSAILSTRYGFSPWLGLPFAMIVPMLVAYPLARALTRLSPLPLSIATFLLSGLFEIAIR 131

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +    T G  G+     L  +    +                    +++ G   +  ++ 
Sbjct: 132 EGGDFTGGYIGLSGIPPLPLVKGVQQMH------------------FLVWGGVLVVVALY 173

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L  +    A  T R +     +    +     + FA S+A  G+AG  +A     + P
Sbjct: 174 ANLMGSTYGLAINTARHDPLRATADGVGVPHLLANTFAASAALAGLAGWLYAHHMSYMGP 233

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           D      +I V+ + ++GG  +L       A L+ V                        
Sbjct: 234 DSLTTQVSISVLLMAVVGGAGTLLGPVAGAAALMLVTLYL----------------PATE 277

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPS 346
            H  +    L +V+++    LL  R  S
Sbjct: 278 SHGMVYGGILLVVLMLAPGGLLGTRWRS 305


>gi|222111252|ref|YP_002553516.1| inner-membrane translocator [Acidovorax ebreus TPSY]
 gi|221730696|gb|ACM33516.1| inner-membrane translocator [Acidovorax ebreus TPSY]
          Length = 355

 Score = 84.9 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 115/309 (37%), Gaps = 7/309 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++  LL         +     ++  ++L++V+      +++G  G++S    + +
Sbjct: 15  VLAVLLMACLLGLAVAPFAFAGVKALNVAAKVLVFVVLVASFDLLLGYTGIVSFAHTMFF 74

Query: 75  AIGAYSYVILGSR---YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
            IGAY   I  SR      ++ + +  + ++S    + +GL SL+ R  + A+ TL ++ 
Sbjct: 75  GIGAYGIAIATSRLGATWGALAVGLGCALLLSLLLALAIGLFSLRVRAIFFAMITLAVAA 134

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            FQ +  +    T G+ G+      +   +                   +  YY+L    
Sbjct: 135 AFQTLASQLSDWTGGEDGLTFKLPEWLSPSFEPFEEEVLGVLIDG---RLITYYLLFVTA 191

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +    +L +  +      + IR+N+    ++   ++  +  +  +S+ F   AGA  A 
Sbjct: 192 VVLVLALLRIVNSPFGRVLQAIRENEFRAEAIGYRVVVYRTLSSVLSALFACAAGAMLAL 251

Query: 252 SRDR-ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                       F   +  + IV++GGM ++      + + +        +      +  
Sbjct: 252 WLRYNGPDTSLSFEIMMDCLLIVVIGGMGTIYGAVVGSVLFVVAQSYLQDLLGVAHEAAS 311

Query: 311 KFDCSFNMR 319
                  + 
Sbjct: 312 GLPWLAALL 320


>gi|206577028|ref|YP_002238597.1| urea ABC transporter, permease protein UrtB [Klebsiella pneumoniae
           342]
 gi|206566086|gb|ACI07862.1| urea ABC transporter, permease protein UrtB [Klebsiella pneumoniae
           342]
          Length = 524

 Score = 84.9 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 89/296 (30%), Gaps = 33/296 (11%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGLSIWLLIPVSAMISGACGMI 109
           I  G LG++++       IGAYS  ++                 + +PV+ +++   GM 
Sbjct: 251 ITYGLLGVINMAHGEMLMIGAYSCWLVQQALAQLAPQWLAFYPLVALPVAFLVTAGIGMA 310

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           +    ++          L    I   ++   + +   +               +   ++ 
Sbjct: 311 LERTIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNVEVANPA------WLSGGVQV 364

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                        + +VLL +CF    +     RT +    R +  N+            
Sbjct: 365 LPNLILPWNRLAVLAFVLLVLCFTWLIL----NRTRLGMNVRAVTQNRAMAACCGVPTGR 420

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
             + AF + S   G+ G   +   +            I    +V+LGG+  L+    A  
Sbjct: 421 VDMLAFGLGSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVAAAF 478

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
            L    ++                         L+++ + L I  R   L  L+  
Sbjct: 479 GLGIFNKILEPQMGAVLGK-------------ILILVMIILFIQKRPQGLFALKGR 521


>gi|148658197|ref|YP_001278402.1| inner-membrane translocator [Roseiflexus sp. RS-1]
 gi|148570307|gb|ABQ92452.1| inner-membrane translocator [Roseiflexus sp. RS-1]
          Length = 361

 Score = 84.9 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 57/314 (18%), Positives = 118/314 (37%), Gaps = 27/314 (8%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            ++I  + I+I I  ++A    ++ G  GLLS    + +A+GAY   I    +GL++W  
Sbjct: 48  SRFIQGLAIEIFILALYALSYDLIFGFTGLLSFGHSMFFAVGAYLTGIALKSFGLNLWQT 107

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
             V  + + A  ++ G+   + +G   A+ TL +S +F  +++               + 
Sbjct: 108 FGVLMLAALAQALLFGIVLPRVKGITFALVTLGLSSVFHIVVMS-------------REL 154

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
             + G  V           S     + +Y+V L +  +   I      + +    + IR+
Sbjct: 155 GDYTGADVGLQGVIIPDFISPATERLRLYFVTLTILVVFYLIYRRFVDSPLGRVCKAIRE 214

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N+     L       KL+A  +SS    +AGA     +  +SPD+      +  + ++++
Sbjct: 215 NEGRAQMLGYNTFLFKLAALILSSLTAAIAGALHTIYQPIVSPDIAGLGFTVTALLMILI 274

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ +L       AI   +                          + +      L++L  
Sbjct: 275 GGVGTLHGALAGAAIFRLLDFGLRRY--------------LGESASFVNGAIYVLIVLFL 320

Query: 336 SHSLLRLRTPSNFL 349
            + ++        L
Sbjct: 321 PYGIVGTWQLKASL 334


>gi|171911821|ref|ZP_02927291.1| inner-membrane translocator [Verrucomicrobium spinosum DSM 4136]
          Length = 388

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/353 (11%), Positives = 94/353 (26%), Gaps = 32/353 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             +   I    A++  ++L L         +  +   + L Y + A  + ++ G  GLLS
Sbjct: 6   QRRESIIFFAFALLLVVILPLASSIGWISPFTLNTWGKYLSYAILAIAVDLLWGYTGLLS 65

Query: 68  LNCVIAYA----------------IGAYSYVI--LGSRYGLSIWLLIPVSAMISGACGMI 109
           L   + ++                +G Y   +       G +    I           ++
Sbjct: 66  LGQALFFSLGGYMMGMYLMLMIGKLGQYKSDLPDFLVFLGHTQLPAIWKPFYSFPFALLM 125

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           + +        +  +A     +     ++            +  D               
Sbjct: 126 VVVIPGILAFIFGYLAFRSRIKGVYFSILTQALTYGAALMFFRNDLNMGGNNGFTDFRFI 185

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                     +  ++ V   +     +   WL  T      R +RD++            
Sbjct: 186 LGADIRSDGTKRTLFIVTAIVLLGVYAGCRWLTTTKFGLIQRAVRDSENRVLFSGYAAAN 245

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            KL  F + +    + G+ F      I+P      +++  +  V +GG  +L        
Sbjct: 246 YKLFVFVLCAIIASLGGSLFVTQVGIINPSEMTTQKSLEAVVWVAVGGRGTLIGPILGAI 305

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +  +                    +        +     L +L     L+ L
Sbjct: 306 GVNSLQSWATR--------------AMPDYWLLFLGAGFTLAVLFMPKGLVGL 344


>gi|72161586|ref|YP_289243.1| branched-chain amino acid ABC-type transport system permease
           [Thermobifida fusca YX]
 gi|71915318|gb|AAZ55220.1| branched-chain amino acid ABC-type transport system permease
           components [Thermobifida fusca YX]
          Length = 481

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 98/320 (30%), Gaps = 32/320 (10%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  LI  + A GLS++ G+  L +         GA   +++      +       + + 
Sbjct: 175 LLYGLIIAISAVGLSLIFGTTKLTNFAHGDMVTFGALMALLVSGMTLFAGLHTAVTNLLA 234

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLI-----------MSEIFQNILIKWKPITNGKAGIY 151
                  +     +       +A L+           +    +   +    +     G+ 
Sbjct: 235 DVWLLGPVLGFVTRPMVLGTVVAVLLGAALGAFLERFIWRPLRKRNVALIQMFIVSIGLA 294

Query: 152 VADRLYFLGTTVRSLIRFFRFPS------SFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           +  R   +     + + +  F          +        +++    +   +   L+ T 
Sbjct: 295 MVLRHVLMVAFGSNRMSYPDFQLQAMLRLGPIAITPRDLVLMILSVLVLVGVAALLQFTR 354

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +  A R + DN+    S    +    L  + +  A   + G F+    ++I      F  
Sbjct: 355 VGKAMRAVSDNRDLAESSGINVDRVTLYVWTLGGALTALGGVFYG--LNQIVHWQMGFHL 412

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
            +++ + VILGG+ +         I+  V +L          +                 
Sbjct: 413 LLLMFAAVILGGLGTAYGAMVGGLIIGLVAQLSTLWFPSQLMNAWALG------------ 460

Query: 326 IALFLVILMRSHSLLRLRTP 345
             + +++L+R   +L  R  
Sbjct: 461 -LMIIMLLVRPQGILGRRER 479


>gi|15600053|ref|NP_253547.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|218893955|ref|YP_002442824.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|9951132|gb|AAG08245.1|AE004899_6 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|218774183|emb|CAW30000.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 359

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 89/304 (29%), Gaps = 13/304 (4%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS- 86
               A     Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +    
Sbjct: 39  PADSALHLSAYSLTLTGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMR 98

Query: 87  ---------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
                          W  +P     +      + L  L       A          + + 
Sbjct: 99  QASGDSLPAFMTFLSWNELPWYWAGTQHFLWALCLVVLVPGALAFAFGYFAFRSRIRGVY 158

Query: 138 IKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                     AG+ +  R    +              FP +       ++   + +   S
Sbjct: 159 FSIMTQALTFAGMLLFFRNETGFGGNNGFTDFRSILGFPITAPGTRAALFLATVALLAAS 218

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L R+        +RD +             KL  + +S+   G+AGA F     
Sbjct: 219 LLLGWRLARSKFGRVLTALRDAENRLMFCGYDPRGYKLFVWTLSAVLCGLAGALFVPQVG 278

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            I+P     + +I     V LGG  +L        ++ G           Y+   L    
Sbjct: 279 IINPSEMSPTNSIEAAVWVALGGRGTLLGPLLGAGVVNGAKSWFTVAFPEYWLFFLGALF 338

Query: 315 SFNM 318
               
Sbjct: 339 IVVT 342


>gi|254244195|ref|ZP_04937517.1| hypothetical protein PA2G_05040 [Pseudomonas aeruginosa 2192]
 gi|126197573|gb|EAZ61636.1| hypothetical protein PA2G_05040 [Pseudomonas aeruginosa 2192]
          Length = 304

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 87/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G ++L     Y I AY   I  +          P+
Sbjct: 9   MINGLTLGSVYGLIAIGYTMVYGIIGRINLAHGEVYMISAYLSAIALALLAFFGLQNFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLLFTVLVTCTYGWVIERIAYKPLRNSTRLAPLISAIGMSLILQNYVQVAQGPRQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+      F     FV       ++L+      A +   +R T +    R  + ++K
Sbjct: 129 GIPTLLDGALKFHVGDGFVQLTYTKLFILIASLIGMAVLTYVIRYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFVIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        +L        GM    +  +  F               L L+++ R   
Sbjct: 248 GSLPGAMLGGLVLGVAEAQFSGMVNTDYKDVFAFS-------------LLVLILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|116053009|ref|YP_793327.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|296391694|ref|ZP_06881169.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1]
 gi|115588230|gb|ABJ14245.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 359

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 89/304 (29%), Gaps = 13/304 (4%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS- 86
               A     Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +    
Sbjct: 39  PADSALHLSAYSLTLTGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMR 98

Query: 87  ---------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
                          W  +P     +      + L  L       A          + + 
Sbjct: 99  QASGDSLPAFMTFLSWNELPWYWAGTQHFLWALCLVVLVPGALAFAFGYFAFRSRIRGVY 158

Query: 138 IKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                     AG+ +  R    +              FP +       ++   + +   S
Sbjct: 159 FSIMTQALTFAGMLLFFRNETGFGGNNGFTDFRSILGFPITAPGTRAALFLATVALLAAS 218

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L R+        +RD +             KL  + +S+   G+AGA F     
Sbjct: 219 LLLGWRLARSKFGRVLTALRDAENRLMFCGYDPRGYKLFVWTLSAVLCGLAGALFVPQVG 278

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            I+P     + +I     V LGG  +L        ++ G           Y+   L    
Sbjct: 279 IINPSEMSPTNSIEAAVWVALGGRGTLLGPLLGAGVVNGAKSWFTVAFPEYWLFFLGALF 338

Query: 315 SFNM 318
               
Sbjct: 339 IVVT 342


>gi|302561200|ref|ZP_07313542.1| ABC transporter [Streptomyces griseoflavus Tu4000]
 gi|302478818|gb|EFL41911.1| ABC transporter [Streptomyces griseoflavus Tu4000]
          Length = 310

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 100/308 (32%), Gaps = 13/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---SYVILGSRYGLSIWLL 95
           + +  +   +Y + A G ++V G + L++      + +GA+   +  +     G SIW+ 
Sbjct: 8   LVNGLLLGSMYGLVAIGYTMVYGIVQLINFAHGEIFMVGAFGALTVHLYILPDGTSIWVA 67

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +P+  + +    +++ + + +F    L  A  +        LI    ++        A  
Sbjct: 68  LPLMLLGAVIVSVLVAIGAERFAYRPLRGAPRLAP------LITAIGLSLALQQAVWAFY 121

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                      I    F       +    ++L+        +  ++ RT      +    
Sbjct: 122 PEAKSKLPFPQIEGGPFSIGGATIQTGDIFLLVAAPISMGFLAYFVMRTRTGRGMQATAQ 181

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +      +        + AFA+ + F  + G        +I   M  F   +   +  +L
Sbjct: 182 DPDTAKLMGVNTDRIIVIAFALGAVFAAVGGVASGLKYGQIDFKM-GFILGLKAFTAAVL 240

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++        +L     L                 S+      +++I + L    R
Sbjct: 241 GGIGNIYGAMIGGVVLGVAETLATAYIADIPGLDKFGSQSWADVWAFILLILVLLF---R 297

Query: 336 SHSLLRLR 343
              LL  R
Sbjct: 298 PQGLLGER 305


>gi|29832765|ref|NP_827399.1| branched-chain amino acid ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
 gi|29609885|dbj|BAC73934.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
          Length = 310

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 100/308 (32%), Gaps = 13/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA---IGAYSYVILGSRYGLSIWLL 95
           + +      +Y + A G ++V G + L++      +     GA +        G S+W+ 
Sbjct: 8   LANGLFLGSMYGLIAIGYTMVYGIVQLINFAHGEIFMTGGFGALTVYFYVLPDGTSMWIA 67

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +P   +  G   +++ + + +F    L  A  +        LI    ++ G   +     
Sbjct: 68  LPAMLIGGGLIAVLIAVGAERFAYRPLRGAPRLAP------LITAIGLSLGLQQVVFNFY 121

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                      +    F    V  +    ++++      A++  ++R +    A +    
Sbjct: 122 PDAKTDRTFPQLGTESFNIGSVHIQSGQLFIIIAAPICMAALGFFVRLSRTGRAMQATAQ 181

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +      +        + AFA+   F  +A   +     +I      F   +   +  +L
Sbjct: 182 DPDTAQLMGIDTNRIIVIAFAIGGLFAAVAAVAYGLRYGQI-KYDMGFQMGLKAFTAAVL 240

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++        +L     L                 S+      +++I + L+   R
Sbjct: 241 GGIGNIYGAMLGGVVLGVAETLATAYIDGIPGMQQLGGGSWAPVWAFVLLILVLLL---R 297

Query: 336 SHSLLRLR 343
              LL  R
Sbjct: 298 PQGLLGER 305


>gi|121613045|ref|YP_001000696.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167005617|ref|ZP_02271375.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni 81-176]
 gi|87249168|gb|EAQ72129.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 298

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 93/303 (30%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++        +GAY+ +   +   +     + +
Sbjct: 10  LVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDIMMVGAYAALFCMTNLNVPFLGALSL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+     + K       I+ LI +      L     I               
Sbjct: 70  AMIFAACVGIATDRIAYKPLRQAPRISLLITAIGISFFLQNLFNILFTSTPRTFTPP--- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             VI       V      +  +++  L ++    A R +  + +
Sbjct: 127 -------SYFEESVNFGGVITTYGSLMVPALTFVILIAVLWILYKSKYGIAIRALAFDIQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           FA+ SA   + G F+AA+   + P M      +   +  +LGG+
Sbjct: 180 TVNLMGIDANRIIAIVFALGSALAAVGGVFWAANYYSVEPTMGTLI-GLKAFAAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+     +            + F    +        I L  ++L R   
Sbjct: 239 GSVVGAVLGGLIIGFTEVVV-----------VAFFPDLSGFKDAFAFIFLVFILLFRPTG 287

Query: 339 LLR 341
           +L 
Sbjct: 288 ILG 290


>gi|330006533|ref|ZP_08305632.1| urea ABC transporter, permease protein UrtB [Klebsiella sp. MS
           92-3]
 gi|328535810|gb|EGF62245.1| urea ABC transporter, permease protein UrtB [Klebsiella sp. MS
           92-3]
          Length = 524

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 89/296 (30%), Gaps = 33/296 (11%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGLSIWLLIPVSAMISGACGMI 109
           I  G LG++++       IGAYS  ++                 + +P++ +++   GM 
Sbjct: 251 ITYGLLGVINMAHGEMLMIGAYSCWLVQQALAQLAPQWLAFYPLVALPMAFLVTAGIGMA 310

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           +    ++          L    I   ++   + +   +               +   ++ 
Sbjct: 311 LERTIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNVEVANPA------WLSGGVQV 364

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                        + +VLL +CF    +     RT +    R +  N+            
Sbjct: 365 LPNLILPWNRLAVLAFVLLVLCFTWLIL----NRTRLGMNVRAVTQNRAMAACCGVPTGR 420

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
             + AF + S   G+ G   +   +            I    +V+LGG+  L+    A  
Sbjct: 421 VDMLAFGLGSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVAAAF 478

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
            L    ++                         L+++ + L I  R   L  L+  
Sbjct: 479 GLGIFNKILEPQMGAVLGK-------------ILILVMIILFIQKRPQGLFALKGR 521


>gi|76800740|ref|YP_325748.1| branched-chain/neutral amino acids ABC transporter permease
           [Natronomonas pharaonis DSM 2160]
 gi|76556605|emb|CAI48176.1| ABC-type transport system permease protein II (probable substrates
           branched-chain/neutral amino acids) 5 [Natronomonas
           pharaonis DSM 2160]
          Length = 378

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 105/293 (35%), Gaps = 8/293 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +   +LL +                  L + + A G+++++    L+S      +
Sbjct: 22  LLYIGIAVAVLLAVPDIEQFHADLRMQTIYLGLCWGLAALGVNLLLRHTELVSFGHAAYF 81

Query: 75  AIGAYSYVILGSR-YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             GAY   ++          LL+    +++ +  +++G     +   Y A+ TL  +++ 
Sbjct: 82  GGGAYGAALVAQYAGIEEAVLLVLAGVLVAISLAVVIGWLVAGYLDIYFALLTLAFNQLL 141

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             I++    +     G+ V            +    F    +   YE+ +YYV + +  +
Sbjct: 142 FAIVMGSPRLLGSDDGLSVRPASE------LTRPTLFGVEFTAAQYEVLIYYVAIAVLIV 195

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              +   L  +    A   I  ++     +   +       F +S+ + G+AG  ++ S 
Sbjct: 196 MLLVTWRLINSPFGRALDAIGQDRTRARFIGIPVKRYVWVTFVISAVYGGLAGGLYSLSM 255

Query: 254 DRISPDMFKFSEN-IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
             + P    F      ++ + ILGG  +L        +L  ++        Y+
Sbjct: 256 LHVRPGNTLFVLRSGEILFMAILGGFKTLLGPIAGGIVLTYMLTELRFATEYW 308


>gi|182435321|ref|YP_001823040.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|178463837|dbj|BAG18357.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 663

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 55/322 (17%), Positives = 115/322 (35%), Gaps = 14/322 (4%)

Query: 2   SIFSLRLNKYDKILCL--LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIV 59
           S    R+ +          A +  LL+ L         Y  S+    L   + A  ++I+
Sbjct: 314 SRVPSRIGRLPGGAAWWRAAPLLVLLVVLISLPALLDAYSISLAGSALALGLLAVSVTIL 373

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
            G  GL +L     +A+GAY+   L         + + +SA+ +     ++G   ++ RG
Sbjct: 374 TGYAGLPTLGQTAPFAVGAYATANLAEAGWTVGPVQLALSALAAAVFAAVVGPAVIRARG 433

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
             + + TL + E+   ++ + K +T G  G+        L            +    ++ 
Sbjct: 434 TTVLMITLAVGELTGAVVNQLKSVTGGADGLVGFPATRAL------------WGGEEMLE 481

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
           E  +Y   L +  ++ S+ L + R+         R  +    +    +    L A   + 
Sbjct: 482 ESELYTYALVVAVVAVSVTLLVLRSPAGKLLTGTRGAEARMRASGHPVGRYLLVAHICAG 541

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  G+ G+     +  ++P    F      +  V++GG TS+        +++   +   
Sbjct: 542 ALAGVGGSLMVTVQQYLAPADVGFEIAAFALLAVVIGGTTSVIGALLGAGLIVATRDWVA 601

Query: 300 GMNFYYFNSLLKFDCSFNMRHT 321
           G    +   LL       +   
Sbjct: 602 GSWPGHGPLLLGVLFVATVYLL 623



 Score = 40.6 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 77/272 (28%), Gaps = 13/272 (4%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           L+  + A GLS+  G+ G+L+L+    YAIGAY+   L       + L +      +   
Sbjct: 19  LLLFVVAAGLSLAFGTAGVLNLSHGTLYAIGAYTGAELSDGTWGGLALGLAAGTAAACLA 78

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G  +   +            L+   +          +                   +   
Sbjct: 79  GAGLSAATAPLARRGHLAQALLTFGLALIGGDLLIQVFGADELPVRVPEALDSSVMLLGH 138

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                       Y  +    ++    L+A     L RT +  A R   D+ +   +    
Sbjct: 139 R-----------YPAYRLCFIVMAVLLAAFGTWVLTRTRMGAAVRAAADDPQMLAATGRN 187

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
                    A + A  G AG   A                 +V+ ++    + SL     
Sbjct: 188 PRAVHTGVLAAAGALAGAAGVLGAPIIGPGPGTSENVLMLSLVVVVLGG--LRSLWATFF 245

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           A   +  V  L   +       LL    +  +
Sbjct: 246 AAIAVGEVQTLGVALAPDLAPYLLFAAMAAVL 277


>gi|317404404|gb|EFV84822.1| hypothetical protein HMPREF0005_02556 [Achromobacter xylosoxidans
           C54]
          Length = 322

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 56/308 (18%), Positives = 118/308 (38%), Gaps = 4/308 (1%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            K L  LA +    L   L +   + ++ ++  + LIY + A  L +++G   ++S    
Sbjct: 3   RKTLVNLAGLALFALVPALASATGEAFLVNLMTRFLIYAIAAVSLDLILGYGAMVSFGHA 62

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             + +G Y   I G  +     L     +  +    ++M   ++        +   +   
Sbjct: 63  AFFGLGGYVIGIAGYHFAQGDTLFGWSGSQAA----LVMWPLAVACAALAGLVVGFLSLR 118

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                 I             +   + + G    S+      P   +   +  YYV L + 
Sbjct: 119 TAGVQFIMITLAFGQMLYFILVGLVVYGGDDGLSIDARNTLPGLDLNGPVTFYYVCLALL 178

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                +   +  +    A +++R N +    L    +  +L+AF +S+A  G+AGA +A 
Sbjct: 179 AAWVFLCRRIVNSPFGMALQSLRQNPRRSTGLGLAPLRYRLTAFVLSAAGAGLAGALWAN 238

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               +SPDM  + ++  ++++VILGGM S+       A+ +G+ +L      ++   L  
Sbjct: 239 YALFVSPDMAGWQKSGELMAMVILGGMGSIFGPVLGVAVYLGLEQLATAWTEHWMLILGP 298

Query: 312 FDCSFNMR 319
                 + 
Sbjct: 299 VLVLVVLF 306


>gi|260425300|ref|ZP_05779280.1| urea ABC transporter, permease protein UrtC [Citreicella sp. SE45]
 gi|260423240|gb|EEX16490.1| urea ABC transporter, permease protein UrtC [Citreicella sp. SE45]
          Length = 381

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/352 (13%), Positives = 102/352 (28%), Gaps = 42/352 (11%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
              +++ L L       +  +   + L+Y M    +++  G  G+L+L   + + +GAY 
Sbjct: 16  ALFIVIVLGLPLMMDDVFWLNRIAKYLVYGMLGIAIALSWGYAGILNLGQGLFFGLGAYM 75

Query: 81  YVI--------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
             +           +          +     GA   +  +    +           M   
Sbjct: 76  VAMSLKLQSYTSMQQGSDRPVPDFMLWNAEPGAPTELCCIVKGSWLWLPFQAQWFGMVMA 135

Query: 133 F----------------------QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                                     +I    +   +  I  A  +      +  L    
Sbjct: 136 IAVPVIVALILSSAIFRLRVSGVYVAIITLALVLLVRLLIIDAQPVTNGFNGLTDLGWLT 195

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                F  Y +  YY++         +  WL  T      ++ RD+      L   +   
Sbjct: 196 VAGIEFDPYMVSTYYIVAVSTCAVLLLTRWLVSTRAGLILQSTRDDPNRARYLGYDVAAY 255

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           ++  F VS+   G AG  +  + +  SP     + +I ++    +GG +SL   A    +
Sbjct: 256 QVFFFTVSAGIAGFAGMLYVIAAEFASPSFLDITFSISMVVWAAVGGRSSLIGAAIGAIL 315

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +  +                     F      ++ +   LV+L     L  L
Sbjct: 316 INTIEATASE------------TEMFQEAWKLIIGVIFVLVVLYMPRGLAGL 355


>gi|83594637|ref|YP_428389.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
 gi|83577551|gb|ABC24102.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
          Length = 314

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 56/331 (16%), Positives = 121/331 (36%), Gaps = 36/331 (10%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L  LA+   L++  F              +++L + +FA   ++++G +GLLS    
Sbjct: 5   RSLLPWLALGLALIVAPFFVYPV-------FLMKVLCFALFACAFNLLLGYVGLLSFGHA 57

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +   AY        + L     + +  + +G  G+  G  +++ +G Y A+ TL +++
Sbjct: 58  AFFGFAAYVSAHALKVWELGPLQAVALGTLTAGVLGLGFGWLAIRRQGIYFAMVTLALAQ 117

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +   + ++            V     F    V    R              +Y+++L + 
Sbjct: 118 MIYFLCLQAAFTHGEDGIQAVPRPPVFGLIDVSDPGR--------------LYWLVLALT 163

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L   +I     +        IR+N+    SL   +   KL AF +S+A  G AGA    
Sbjct: 164 VLGFLVIARAIHSPFGQVLTAIRENEPRAISLGYDVDRYKLVAFVLSAALAGFAGAIKVM 223

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                S     +  +  V+ + ++GG+ +L+      A+++G+  +              
Sbjct: 224 VFQLASLTDVHWHMSGEVVLMTLIGGVGTLAGPLVGAAVVVGIQNVFASF---------- 273

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                    T +  +     +L+    ++  
Sbjct: 274 -----GAWVTIIQGVIFVACVLLFRRGIMGE 299


>gi|149182627|ref|ZP_01861096.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus sp. SG-1]
 gi|148849650|gb|EDL63831.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus sp. SG-1]
          Length = 335

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 52/325 (16%), Positives = 122/325 (37%), Gaps = 31/325 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +    L   L    + + +  + +Q+ I  +FA    +++G  G++S    + + IGAYS
Sbjct: 14  LIIAFLLAVLPFMVTGRSLLFLMMQVFILGIFAMSYDLLLGYTGIVSFGHTMFFGIGAYS 73

Query: 81  YVILGS---RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             ++ +      L++ L I ++ +++G    I+G+ +L+ +  + A+ TL ++ +F    
Sbjct: 74  TAVMFNKQEPTMLTLLLGILIAVVVAGIVSFIVGVLTLRLKSHFYAMLTLALAGLFLVAA 133

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T G  G   +                       +     +Y   L +  L    
Sbjct: 134 EKWRSVTGGADGFTFSVP-------------------DALKDRTTLYLTCLAVMVLVFFG 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +     + +      IR+N+    SL   ++  K+    VS     ++G  +  +   + 
Sbjct: 175 LKRFTESPLGRVLLAIRENEGRTESLGYKVLHYKVIVSVVSGVVASISGVLYMLTLRFVD 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + I+GG+ +L       A++        G++  ++           
Sbjct: 235 TSVFATEVTLDALLMTIIGGVGTLIGPIIGAALVEFAHHWLSGLSDVHW---------IF 285

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
            R   L      L ++     +   
Sbjct: 286 ERWIILFGTVYILAVIFFPKGIAGT 310


>gi|110668856|ref|YP_658667.1| ABC-type branched-chain amino acid transport system, permease
           protein II [Haloquadratum walsbyi DSM 16790]
 gi|109626603|emb|CAJ53067.1| ABC-type branched-chain amino acid transport system, permease
           protein II [Haloquadratum walsbyi DSM 16790]
          Length = 477

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 71/397 (17%), Positives = 133/397 (33%), Gaps = 62/397 (15%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQ-ILIYVMFAWGLSIVVGSLGLLSLNCV 71
             L    + Y L+      + + Q    ++    I ++ M A  L++  G  GL ++  V
Sbjct: 24  ATLAATYLAYVLIGIGLGYSLRGQLNTIAVLTFYIGVFAMLALALNLHWGYTGLFNIGIV 83

Query: 72  IAYAIGAYSYVILGSRYGL------------SIWLLIPVSAMISGACGMIMGLPSLKFRG 119
              A+G Y   ++                   + + I    + +   G+++ LP+L+ R 
Sbjct: 84  GFMAVGIYVMALVSKPVYQAGGASQVGGLGLPVIIGIIAGMIAASLLGLLIALPALRLRA 143

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIY------------VADRLYFLGTTVRSLI 167
           DYLAI T+ MSEI +   +  +      AG                D L    +      
Sbjct: 144 DYLAIVTIAMSEIVRFSFLSGQLQQFNLAGRRVGFGGGSGLILDYTDPLESFFSFFGLWD 203

Query: 168 RFFRFPSSFVIY----------EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +     +F I            +    VLL    L   ++     +      + IR+++
Sbjct: 204 AYLGLIETFGIIIPNNPKPVVDGLVYGVVLLSFVGLYFWLLKRTGESPFGRVLKAIREDE 263

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +A  SL       K+ AF +  A +G+AG  +      ++P+ F+      V   +I+GG
Sbjct: 264 EAASSLGKDTNGFKIKAFMLGCALMGLAGILWFMRSGAVTPNTFRPRITFFVWIALIIGG 323

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN-------------------- 317
             S +      AI   ++           +++L    S +                    
Sbjct: 324 AGSNTGSVLGGAIFAALLYQGPRYLKNLLDTVLPSASSPSSFGPAIAPLISNLDITPLLF 383

Query: 318 -------MRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                        M + L  ++  R   LL  RT + 
Sbjct: 384 YTIDNIRQLQLVFMGVVLIWLMHNRPEGLLGHRTETA 420


>gi|25011671|ref|NP_736066.1| hypothetical protein gbs1631 [Streptococcus agalactiae NEM316]
 gi|24413211|emb|CAD47290.1| unknown [Streptococcus agalactiae NEM316]
          Length = 289

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 102/303 (33%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   IY + A G ++V G + L++      Y +GA+    L +   L+ +L + +
Sbjct: 5   LINGLILGSIYALLALGYTMVYGIIKLINFAHGDIYMMGAFMGYYLINHLHLNFFLALLI 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + S   G ++   + +       IA LI +     +L        G            
Sbjct: 65  AMLGSAFLGAVIEYLAYRPLRKSTRIAALITAIGVSFLLEYGMVYLVGAD---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I   ++    +        +L     L  ++   +++T +  A R +  +  
Sbjct: 115 -TRAFPQAIHTVKYNLGPITITNVQLIILGIALLLMLTLQFIVQKTKMGKAMRALSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G  G       + + P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAGGVLIGLYYNSVQPLM-GVTPGLKAFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +  L   +               +     ++   L L+ L+R   
Sbjct: 233 GIIPGAAIGGFVIGILETLATALG-------------VSDFRDGIVYAILILIFLIRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|90422881|ref|YP_531251.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90104895|gb|ABD86932.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 358

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 53/347 (15%), Positives = 117/347 (33%), Gaps = 13/347 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + ++  +                ++  +I I+        +++G  G +S    + Y
Sbjct: 13  LLSVLLIAIVAGLALAPLLFPGAKPLNVATKICIFAALVASYDLLLGYTGTVSFAHTMFY 72

Query: 75  AIGAYSYVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
            IG+Y+  I          +I L + V   ++    + +GL SL+    + A+ TL ++ 
Sbjct: 73  GIGSYAIAIALYTLGPSWSAIALGLAVGLPLAALLALAIGLFSLRVEAIFFAMITLAVAS 132

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            F  +  +   +T G+ G            TV        F  +        YY++   C
Sbjct: 133 AFMVLASQLSWLTGGEDGRSFQLPELLRPGTVFIAKDVLGFAVNGRTLT---YYIIFVGC 189

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                 +L +  +      + +R+N+    +L    +F    A  +++     AGA  A 
Sbjct: 190 AAMILGLLRVVNSPFGRVLQAVRENRFRAEALGYRTVFHLTYANCIAALVAASAGALNAM 249

Query: 252 SRDRISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                 PD    F+  + ++ +V++GGM ++        I I        +     N+  
Sbjct: 250 WLRYAGPDTSLSFAIMLDILLMVVIGGMGTIYGAIIGATIFILAQNYLQALMGLASNAAA 309

Query: 311 KFDCSF------NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +             R    + +     +      ++     ++   R
Sbjct: 310 EAGLPLLPGLLHPDRWLLWLGLLFIASVYFFPTGIVGRLRETSRSRR 356


>gi|312958683|ref|ZP_07773203.1| permease of ABC branched chain amino acid transporter [Pseudomonas
           fluorescens WH6]
 gi|311287226|gb|EFQ65787.1| permease of ABC branched chain amino acid transporter [Pseudomonas
           fluorescens WH6]
          Length = 304

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 88/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P+
Sbjct: 9   LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIESFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLIFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQIAQGAKQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +        S FV       ++L+      A +   ++ T +    R  + ++K
Sbjct: 129 GIPPLLAGAWRVDIGSGFVQLTYTKVFILVAAFAGMALLTYVIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL     L  G+    +  +  F               L ++++ R   
Sbjct: 248 GSLPGAMLGGIILGISESLFSGLINSDYKDVFSFS-------------LLVVILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|296102370|ref|YP_003612516.1| branched-chain amino acid transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295056829|gb|ADF61567.1| branched-chain amino acid transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 357

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 50/342 (14%), Positives = 103/342 (30%), Gaps = 27/342 (7%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  L ++    +           ++ ++  +IL Y + A  L +V G  G+LSL   I 
Sbjct: 24  LVACLLILPFFAMLPATHPLALSTWMLTLLGKILCYAIVAVALDLVWGYAGMLSLGHGIF 83

Query: 74  YAIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           +A+G Y+  +                   W  +P     +      + L  +      L 
Sbjct: 84  FALGGYAMGMYLMREAAGDGLPAFMSFLSWSELPWFWWGTQHFAWTLVLIVMVPGLLALV 143

Query: 124 IATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
                     +     ++       G    +  +  +              F  +     
Sbjct: 144 FGWFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFSITATTTR 203

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           I ++   + +  L+  I + L R+        +RD +             KL  + +S+ 
Sbjct: 204 IALFLATVMLLLLTLGIGIALARSKFGRILTAVRDAENRLTFCGYDPKGFKLLVWTLSAM 263

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             G+AGA +      I+P     + +I     V LGG  +L       A++ G       
Sbjct: 264 LCGLAGALYVPQVGIINPGEMSPTNSIEAAIWVALGGRGTLVGPVIGAALVNGAKSF--- 320

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                      F  +  +     + +    V L     +  L
Sbjct: 321 -----------FTVAMPVYWQLFLGLIFIAVTLFLPRGVYGL 351


>gi|119025462|ref|YP_909307.1| permease of ABC transporter for branched-chain amino acids
           [Bifidobacterium adolescentis ATCC 15703]
 gi|118765046|dbj|BAF39225.1| permease of ABC transporter for branched-chain amino acids
           [Bifidobacterium adolescentis ATCC 15703]
          Length = 322

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 105/304 (34%), Gaps = 13/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A G ++V G + L++        +G+Y   ++ +   +  + L   
Sbjct: 26  IFNGLKIGSVYSLVALGYTMVYGIIRLINFAHGDFIMVGSYV--LMLTIPAIVAFGLPAW 83

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+I      +     ++                    +     + NG   I+ AD    
Sbjct: 84  VAVIPAILMCVAVGVIVERAAYKPVREKGNSMTALITAIAMSLLLENGSQAIFGAD---- 139

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              TV ++I+        +  +      ++    +  ++ L++  T    A R + ++++
Sbjct: 140 -YQTVPTIIQIPTLAIGKLKIDGATIITIVLGVIIMVALQLFVTYTKQGKAMRAVSEDKE 198

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S    +A   +  S  ++S  M      +      +LGG+
Sbjct: 199 ASILMGINVNSTITLTFAIGSGLAAVASLMYCVSYPQVS-PMMGAMLGLKAFVAAVLGGI 257

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  V  L         + ++    S       ++   L +V+L++   
Sbjct: 258 GSIPGAMVGGLVIGVVESLTKAYIGTITSGVITSAFSDA-----IVFGILIIVLLVKPSG 312

Query: 339 LLRL 342
           L+  
Sbjct: 313 LMGE 316


>gi|206890605|ref|YP_002248608.1| high-affinity branched-chain amino acid transport system permease
           protein livm [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206742543|gb|ACI21600.1| high-affinity branched-chain amino acid transport system permease
           protein livm [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 318

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 61/282 (21%), Positives = 118/282 (41%), Gaps = 18/282 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A+    ++ + L       Y   +  Q  ++   A G +I++G  G  +   +  + IG
Sbjct: 5   IALFIIFIVAVCLLPFFISGYWLRVLTQTFMFAAIATGSNIIIGYTGYPAFGNIAFFGIG 64

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   +L ++Y +S    +P  A+      +++G+P L+ +G Y AIAT+ + E  + I+
Sbjct: 65  AYVTGVLMTKYEISFIATLPFCALGGFIVAILLGIPLLRLKGHYFAIATVGVMEAMKKIV 124

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                IT G  G                 +              F YY +L +  LS +I
Sbjct: 125 DNMTEITGGGLG-----------------LTLPIMEGDPAYIYKFFYYTILLIMLLSIAI 167

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              + ++    A R IR ++ A   +       K  A+ +S A + +AG  +A     I 
Sbjct: 168 AFIVWKSKFGYALRAIRIDEDAASVMGINTALYKTFAWGISGALVSIAGGAYAYWLTYID 227

Query: 258 PDMFKFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           P     +  ++ + ++++LGG T++        IL  + E+ 
Sbjct: 228 PSTVFVTSYSVKMFAMILLGGATTIFGPMLGAFILELISEIV 269


>gi|241518274|ref|YP_002978902.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240862687|gb|ACS60351.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 361

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 56/313 (17%), Positives = 115/313 (36%), Gaps = 19/313 (6%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                + +      IL  ++ A   +++ G  GL+S+   +    GAY+       +G+ 
Sbjct: 35  PFIVSRGVIQDLFFILTMLVLAQNWNLLAGYAGLISVGQQVFVGFGAYTMFGCVILFGVD 94

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             + I ++ ++S A  +     + +  G Y AI T +++E+ + +L +WK +  G     
Sbjct: 95  PVVAILIAGVLSAALAIPTAFFTFRLYGPYFAIGTWVVAEVVRLLLAQWKALGGGTG--T 152

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              R           +R      +    +   Y++ L +   +   I  L R+       
Sbjct: 153 SLPREATRDMMGVGAMRDLFGMKASEAGDTLTYWLALILAVATIGFIYGLLRSKQGLGLA 212

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK--FSENIIV 269
            +RDN++A  ++       K   +  ++   G+AGA     + RISPD           V
Sbjct: 213 AVRDNEQAARAVGVDARRMKTLVYLATAFMTGIAGALIYVQKARISPDAAFSVTDWTAYV 272

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           I IV+ GG+ ++        I   +  L                      +  ++ +   
Sbjct: 273 IFIVVTGGIGTIEGPILGVIIFFLLQNLLADY---------------GSWYLLMLGLLGI 317

Query: 330 LVILMRSHSLLRL 342
            ++L+    L  L
Sbjct: 318 AIMLLAPRGLWGL 330


>gi|56696376|ref|YP_166733.1| branched-chain amino acid ABC transporter, permease/ATP-binding
           protein [Ruegeria pomeroyi DSS-3]
 gi|56678113|gb|AAV94779.1| branched-chain amino acid ABC transporter, permease/ATP-binding
           protein [Ruegeria pomeroyi DSS-3]
          Length = 582

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 57/302 (18%), Positives = 102/302 (33%), Gaps = 39/302 (12%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
             LIY + A G+  + G  G+L L   + +   AY   I        I  L    A++  
Sbjct: 32  LYLIYGIAAQGIGFLWGKTGVLPLGQALFFGFAAYVTAITLRAETGLITELALAVAVLVA 91

Query: 105 ACGMIMGLPSLKFR-----GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                  L +L FR     G Y ++ TL +  I + I      +T G  G+   D     
Sbjct: 92  IAVFACALAALIFRGRNDSGPYFSLITLALVMIAEQIAGTATTLTGGFNGLSGFD----- 146

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                            +      YYV++G+    + ++  L R  ++   R + DN+  
Sbjct: 147 -------------SLGKLDPFAGFYYVIVGVTVAVSLLLFVLNRLPVNLIARAVADNEPR 193

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMA-GAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              L       K +AFA S+    +A G    + +  ++P    F  +  ++ +  +GG 
Sbjct: 194 LQLLGFPTHIIKGAAFAFSAVIAALAGGGCLPSHQGIVTPTSMGFGLSAELVILTAVGGR 253

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        ++            Y+                 LM +A  LV+L     
Sbjct: 254 YHVLGPLIGAVLVGWASAELRDSFPYWE---------------LLMAVAFILVVLKAPGG 298

Query: 339 LL 340
           + 
Sbjct: 299 IA 300


>gi|255523334|ref|ZP_05390304.1| inner-membrane translocator [Clostridium carboxidivorans P7]
 gi|296188267|ref|ZP_06856659.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Clostridium carboxidivorans P7]
 gi|255512988|gb|EET89258.1| inner-membrane translocator [Clostridium carboxidivorans P7]
 gi|296047393|gb|EFG86835.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Clostridium carboxidivorans P7]
          Length = 294

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 57/305 (18%), Positives = 110/305 (36%), Gaps = 20/305 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +YV+ A GL+++ G L LL     + Y  GA++ +   + +  +I++ +  
Sbjct: 6   LFNGITMGSVYVLIAIGLTMIYGILELLHFAHGVVYMAGAFAAISCITLFHTNIFVAVVA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++S   G  + + + K   +   I  LI       +L     I  G   I   ++   
Sbjct: 66  AMIVSAFFGWFIEIFAYKPVRNAPKITALISGIGMAIVLENIYRIIYGSQTIAFPEQSIT 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T              +    +  Y+++    L   + L+L+ T    A R +  +  
Sbjct: 126 PVKTYNLSKN--------ISITNYQIYIIVMTIILIIILHLYLKYTKNGMAMRAVSMDFD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       F + SA  G+AG   A   + + P M      +   +IV+LGG+
Sbjct: 178 ASSLMGINVNKIISITFIIGSAMAGVAGTLVALYFNAVYPAM-GSMPGMKAFAIVVLGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L  V     G    +      F             + L LV+L+R   
Sbjct: 237 GSIPGTIVGGLFLGIVESFADGYLGNFIVGKDAFA-----------FVILILVLLIRPSG 285

Query: 339 LLRLR 343
           L   +
Sbjct: 286 LFGKK 290


>gi|115372841|ref|ZP_01460146.1| branched-chain amino acid ABC transporter, permease protein
           [Stigmatella aurantiaca DW4/3-1]
 gi|310818508|ref|YP_003950866.1| branched-chain amino acid ABC transporter permease [Stigmatella
           aurantiaca DW4/3-1]
 gi|115370108|gb|EAU69038.1| branched-chain amino acid ABC transporter, permease protein
           [Stigmatella aurantiaca DW4/3-1]
 gi|309391580|gb|ADO69039.1| Branched-chain amino acid ABC transporter, permease protein
           [Stigmatella aurantiaca DW4/3-1]
          Length = 306

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 90/307 (29%), Gaps = 17/307 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95
           + +      IY + A G ++V G L L++        +G    Y       R      L 
Sbjct: 8   LINGLAAGTIYALVALGYTMVYGVLKLINFAHGDVMMVGVYMGYGTAYALGRQAQKSVLG 67

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + +  +++ A   ++G    +F    L     + + I    +             ++   
Sbjct: 68  VVLIFLVAMAGCALLGFLIERFAYRPLREKPRLTALITAIGISFALSYGFQLDIGFLPGA 127

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                  +     +       V+   +    LL    L   +   + +T    A R +  
Sbjct: 128 APRAFPEIIQPSEWLIIGDRDVVVWNWQIMSLLIAVGLMVGLQYLVFKTRFGRAMRAVSY 187

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           + +    +           F + S     AG  +A     ++P M      +      ++
Sbjct: 188 DHRVAALMGIPTDRIIAVTFMIGSGLAAGAGLLYAIKDTSVNPLM-GLFVGLKAFVAAVI 246

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  +        +L  V E   G     +   + F               L +V+L+R
Sbjct: 247 GGIGHVPGAVVGALMLGLVEEFVVGYVASTWRDAVAFG-------------ILIIVLLVR 293

Query: 336 SHSLLRL 342
              L   
Sbjct: 294 PGGLFGR 300


>gi|227819704|ref|YP_002823675.1| branched-chain amino acid ABC transporter permease [Sinorhizobium
           fredii NGR234]
 gi|227338703|gb|ACP22922.1| branched-chain amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 336

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 71/329 (21%), Positives = 132/329 (40%), Gaps = 28/329 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L        + +           ++       + Y +   GL++++G  G + L     +
Sbjct: 5   LLRFVSAGFVGVAALALPLFVPDFLLFEISIAIAYGIAILGLNLLLGFTGQICLAQGALF 64

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY+  IL   +G    + +PVSA+ +G+ G+++GLP+L+ +G  LAI T  ++  F 
Sbjct: 65  GVGAYTTAILNVNFGWDPVVTLPVSAITAGSVGVLIGLPALRLQGLQLAIITFGVAAAFP 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +L+K   +T G  G+     L                       E ++Y + L     S
Sbjct: 125 QLLLKMDSLTGGVTGLATDQPLAPEWF--------------PGSQEAWLYGLSLICAVAS 170

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +I  L R       R +RDN     +L   +   +L+AF VSSA  G+ G  F     
Sbjct: 171 ILVISRLMRGDTGRLMRALRDNPVIAETLGVNLTKGRLAAFGVSSALAGLGGGLFCILNG 230

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ISP  F   ++I ++   I+GG+TS+         ++ V  +   ++            
Sbjct: 231 FISPQSFLPMKSIDILIGGIVGGITSIPGALIGAVFIVFVPGVTTDISPALGG------- 283

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                   +  + L  ++++    +  LR
Sbjct: 284 -------LIYGLCLMGMMMVARQGIAGLR 305


>gi|152970170|ref|YP_001335279.1| high-affinity branched-chain amino acid transport [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|150955019|gb|ABR77049.1| high-affinity branched-chain amino acid transport [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
          Length = 357

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/336 (14%), Positives = 98/336 (29%), Gaps = 27/336 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L L           ++ ++  +IL Y + A  L +V G  G+LSL   I +A+G Y+  
Sbjct: 33  FLALLPASHPLAVPSWLLTLSGKILCYAIVAVALDLVWGYAGMLSLGHGIFFALGGYAMG 92

Query: 83  IL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
           +               S    S                 ++ L        +   A    
Sbjct: 93  MYLMRQAAGDGLPAFMSFLSWSELPWFWWGTQHFAWAMALVVLVPGLLALVFGWFAFRSK 152

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            +     ++       G    +  +  +              FP +       ++   + 
Sbjct: 153 IKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPVTATGTRASLFMATVL 212

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +   L ++        +RD +             KL  + +S+   G+AGA +
Sbjct: 213 LLLLTLWLGSALAQSKFGRILTAVRDAENRLMFCGYDPRGFKLLVWTLSAVLCGLAGALY 272

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                 I+P     + +I     V LGG  +L        ++ G   +            
Sbjct: 273 VPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGLVNGAKSI------------ 320

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
             F  +        + +   +V L     ++ L   
Sbjct: 321 --FTVAMPEYWQLFLGLIFIIVTLFLPRGVMGLLRR 354


>gi|170737626|ref|YP_001778886.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
 gi|169819814|gb|ACA94396.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
          Length = 308

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G S+V G +G+++      Y IGAY  ++  +           L
Sbjct: 12  LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGISAGYPLPL 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS +++G  G  +   + +       +  LI +      L  +  I  G    
Sbjct: 72  VLGAALIVSVIVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +             V        ++     L  ++ L++  + +  A 
Sbjct: 129 ----RDVSVPVLISGAFEIHLGGDYDVTIPYARLLIVCVTLVLMIALTLFISHSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +    + G     +  +++P    F   I   
Sbjct: 185 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L        G     +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|15966340|ref|NP_386693.1| branched chain amino acid ABC transporter permease [Sinorhizobium
           meliloti 1021]
 gi|307307810|ref|ZP_07587539.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
 gi|307317472|ref|ZP_07596912.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|15075611|emb|CAC47166.1| Putative branched chain amino acid transport system permease ABC
           transporter [Sinorhizobium meliloti 1021]
 gi|306897061|gb|EFN27807.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|306901676|gb|EFN32278.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
          Length = 342

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/338 (14%), Positives = 115/338 (34%), Gaps = 43/338 (12%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +  D +   +LI ++   GL   +G+ GLLS   +    +GAY+  +L     +
Sbjct: 22  SQLLGIRLYDRIATNLLISLVLVIGLQTFMGNSGLLSFAHIGFMGLGAYTSAVLTIPAQM 81

Query: 91  S-----------------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
                               L +  + +++     I+  P ++       I +  +  + 
Sbjct: 82  KGMALPDLYEFMKVVEVSPLLAMLAAGVLAAVVAAIVAYPLMRLSDAASVITSFALLVVL 141

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             ++  W   TNG   ++   +   +               +F                 
Sbjct: 142 YTVMNNWSAFTNGPRTLFGLPKTTDMPVAAIVAAIVVVVALAF----------------- 184

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
                   + +      R  R+++ A  +L   I   +  AF +++   G+ GA +    
Sbjct: 185 --------KESRTGKLLRASREDEVAAAALGADIPQLRWRAFILAAFIAGIGGALWGHFI 236

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
              +P  F   E  ++I+++++GG  +++     T ++    E   G       + L   
Sbjct: 237 TSFAPKAFYLKETFLIITMLVIGGANTVTGAVAGTILVTFAYEGLRGTEGALNATALGAG 296

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               +    ++ +A+  V++++   L   R   + L R
Sbjct: 297 QVVGLTE-IVLALAMIAVMIVKPGGLFPNREIGHILTR 333


>gi|330826231|ref|YP_004389534.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|329311603|gb|AEB86018.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 309

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 99/305 (32%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G + L++        IGA +          ++      
Sbjct: 8   IINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMIGALTSWSCIGLMQDAMPGAPGW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++       +   +L F  + +A   L  S     ++         +    +  +  +
Sbjct: 68  LMLLLATLVACVVAATLNFAIEKVAYKPLRNSPRLAPLITAIGMSILLQTLAMIVWKPNY 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+    F     +       +L       AS++  +  T +  A R   +N +
Sbjct: 128 --KPYPTLLPAAPFQVGGAVITTTQILILGVTVVALASMVYLVSYTRLGRAMRATAENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + F + +    +AG  +A++       M  F   +   +  + GG+
Sbjct: 186 VAALMGVKPDMVISATFIIGAVLAAIAGIMYASNYGTAQHTM-GFLPGLKAFTAAVFGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  +  G        +L      +        I L +V+ +R   
Sbjct: 245 GNLAGAVVGGLLLGLIEAIGSGYIGVLTGGVLG-----SHYTDIFAFIVLIIVLTLRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|186477790|ref|YP_001859260.1| inner-membrane translocator [Burkholderia phymatum STM815]
 gi|184194249|gb|ACC72214.1| inner-membrane translocator [Burkholderia phymatum STM815]
          Length = 323

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 56/324 (17%), Positives = 134/324 (41%), Gaps = 16/324 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            +Y LLL   + A  +  Y   +  ++L + +FA   ++++G  GLLS    +  A   Y
Sbjct: 5   ALYVLLLIALIVAPFAGAYPVFVM-KVLCFALFAGAFNLLIGYTGLLSFGHAMFLATAGY 63

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                     LS  L +      + A G+++GL +++ +G Y A+ TL ++++   + ++
Sbjct: 64  VTGYAIQTLALSPELGVLAGTAAATALGLVVGLFAIRRQGIYFAMVTLALAQMVYFVFLQ 123

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                                  ++ + R   F    +  ++ +Y+V+L +  L+  +I+
Sbjct: 124 A--------------PFTHGEDGLQGVPRGKLFGVLSLSSDLTLYFVVLAVMVLAFLLIV 169

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +        I++N+    SL       KL AF +S+   G+AG+         +  
Sbjct: 170 RIVHSPFGQVLIAIKENEPRAISLGYDTNRFKLLAFILSAGLAGLAGSLKVIVLGFETLG 229

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318
              ++ + +V+ + ++GGM +L       A+++ + +    +     + + +++  S   
Sbjct: 230 DAYWTMSGLVVLMTLVGGMGTLFGPLLGAALIVALEDRLGDIGSGLASMTGVEWFRSLGE 289

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
             T +  +     +L     ++  
Sbjct: 290 SATIVTGLIFIACVLAFRRGIVGE 313


>gi|46578963|ref|YP_009771.1| high-affinity branched-chain amino acid ABC transporter permease
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120603439|ref|YP_967839.1| inner-membrane translocator [Desulfovibrio vulgaris DP4]
 gi|46448376|gb|AAS95030.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563668|gb|ABM29412.1| L-leucine ABC transporter membrane protein / L-isoleucine ABC
           transporter membrane protein / L-valine ABC transporter
           membrane protein [Desulfovibrio vulgaris DP4]
 gi|311232818|gb|ADP85672.1| inner-membrane translocator [Desulfovibrio vulgaris RCH1]
          Length = 302

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 91/299 (30%), Gaps = 17/299 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
             +  IY + A G ++V G + L++      Y IGA++ +I+    G+  +    +  + 
Sbjct: 14  LTRGSIYALIALGYTMVYGIIELINFAHGEVYMIGAFTALIVAGVLGIYGFPEAGILIIA 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +    +                          + LI    ++       +  +       
Sbjct: 74  AIVAVIYCAAYGFTLEKVAYKPLRDA---PRLSPLISAIGMSIFLQNYVILAQTSDFVPF 130

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
            R +           I       +++        + L+++ T +  A R    N+K    
Sbjct: 131 PRLVPDLAILEPIAHITGTSDVLIIVTSAITMVGLTLFIKYTRMGKAMRATAQNRKMAML 190

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L           F + S+   + G   A+   +++     F   I   +  +LGG+ S+ 
Sbjct: 191 LGIDADRVISLTFIIGSSLAAIGGVLIASHIGQVNF-AIGFIAGIKAFTAAVLGGIGSIP 249

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  +L        G     +   L F               L L+++ R   +L 
Sbjct: 250 GAMAGGLVLGLCESFATGYVSSDYEDALAF-------------ALLVLILIFRPSGILG 295


>gi|226940833|ref|YP_002795907.1| LivH [Laribacter hongkongensis HLHK9]
 gi|226715760|gb|ACO74898.1| LivH [Laribacter hongkongensis HLHK9]
          Length = 309

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 94/305 (30%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   IY + A G ++V G +GL++        IGA   + +   +      L   
Sbjct: 8   ILNGLVLGSIYALIALGYTMVYGIMGLINFAHGEVTMIGAMVTISVLGVFSSMGLALPGP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      +     + F  + +A   L  +     ++                     
Sbjct: 68  VLVLMALMVAVPTCMLVGFLIERVAYRPLRNAPRLAPLITAIGLSI--VLQNVAILIWGR 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 SL+                  +++    + A ++L   +T +  A R    N  
Sbjct: 126 NYIPFPSLLPHNPIDVFGASITDLQVVIIVLAIAIMAGLLLMTEKTKLGRAMRATSQNPA 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +     + F + +    +AG   AA+ D+    M  F   +   +  +LGG+
Sbjct: 186 VAGLMGVNVNSVISATFVIGAGLGAIAGVMVAANYDQAHSHM-GFIIGLKAFTAAVLGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L  +  L  G         L      +          L LV++ R   
Sbjct: 245 GNLGGAVVGGILLGVIESLGAGYIGSLTGGFLG-----SHYQDIFAFAVLILVLVFRPSG 299

Query: 339 LLRLR 343
           L+  R
Sbjct: 300 LMGER 304


>gi|330807261|ref|YP_004351723.1| high-affinity branched amino acid ABC transporter permease
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327375369|gb|AEA66719.1| Putative high-affinity branched amino acid ABC transporter,
           permease component [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 304

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 87/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P+
Sbjct: 9   LINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIESFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  MILGTLVFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+          S FV       ++L+        +   ++ T +    R  + ++K
Sbjct: 129 GVPTLLEGAMRVDIGSGFVQLTYTKIFILIAAFAGMGLLTYIIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL     L  G+    +  +  F               L L+++ R   
Sbjct: 248 GSLPGAMLGGIILGISESLFSGLINSDYKDVFSFS-------------LLVLILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|77456781|ref|YP_346286.1| inner-membrane translocator [Pseudomonas fluorescens Pf0-1]
 gi|77380784|gb|ABA72297.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 304

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 88/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P+
Sbjct: 9   LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIESFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LMLGTLIFTIVITAVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQIAQGAKQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+ +        + FV       ++L+        +   ++ T +    R  + ++K
Sbjct: 129 GVPTLLTGAWRVEVGTGFVQLTYTKVFILVAAFVGMGLLTYVIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL     L  G+    +  +  F               L LV++ R   
Sbjct: 248 GSLPGAMLGGIILGISESLFSGLVNSDYKDVFSFS-------------LLVLVLVFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|229588104|ref|YP_002870223.1| high-affinity branched-chain amino acid transporter permease
           [Pseudomonas fluorescens SBW25]
 gi|229359970|emb|CAY46824.1| high-affinity branched-chain amino acid transport system permease
           [Pseudomonas fluorescens SBW25]
          Length = 304

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 89/304 (29%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P+
Sbjct: 9   LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIESFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLVFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQIAQGAKQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+ +        S FV       ++L+      A +   ++ T +    R  + ++K
Sbjct: 129 GIPTLLAGAWRVDIGSGFVQLTYTKVFILVAAFAGMALLTYIIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL     L  G+    +  +  F               L ++++ R   
Sbjct: 248 GSLPGAMLGGIILGISESLFSGLINSDYKDVFSFS-------------LLVVILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|192290903|ref|YP_001991508.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|192284652|gb|ACF01033.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 323

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 56/324 (17%), Positives = 115/324 (35%), Gaps = 30/324 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            + + ++  L L    +  Y   +  Q L + + A   ++++G  GLLS    +      
Sbjct: 21  MIAFGIMTALLLVVPFTGVYPFFVM-QGLCFALLACAFNLLIGYGGLLSFGHAMFLGTAG 79

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y        +GL   L I V    + A  ++ GL +++ +G Y A+ TL +S++   I +
Sbjct: 80  YVSGHALKVWGLPPELAIIVGTAAAFALSVLTGLIAIRRQGIYFAMITLALSQLLYFIYL 139

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +                       ++ + +   F    +     +Y+V+L    L   II
Sbjct: 140 QA--------------PFTHGEDGIQGIPQGKLFGFIDLSNATTLYFVVLAGFLLGFLII 185

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
                +      + IR+N+    SL       KL AF +S    G AGA         S 
Sbjct: 186 YRAINSPFGEVLKAIRENEPRAISLGYKTDQYKLLAFILSGTLAGFAGALKVFVAQNASL 245

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
               +S +  ++ + ++GG+ ++        ++I + +   G                  
Sbjct: 246 TDVHWSMSGEIVLMTLVGGLGTVFGPVVGAFVIIAMQQYLAGF---------------GQ 290

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
             T +  +     +L     ++  
Sbjct: 291 WVTVIQGVIFVACVLTFRRGIVGE 314


>gi|288935584|ref|YP_003439643.1| urea ABC transporter permease [Klebsiella variicola At-22]
 gi|288890293|gb|ADC58611.1| urea ABC transporter, permease protein UrtB [Klebsiella variicola
           At-22]
          Length = 524

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 89/296 (30%), Gaps = 33/296 (11%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGLSIWLLIPVSAMISGACGMI 109
           I  G LG++++       IGAYS  ++                 + +PV+ +++   GM 
Sbjct: 251 ITYGLLGVINMAHGEMLMIGAYSCWLVQQALAQLAPQWLAFYPLVALPVAFLVTAGIGMA 310

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           +    ++          L    I   ++   + +   +               +   ++ 
Sbjct: 311 LERTIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNVEVANPA------WLSGGVQV 364

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                        + +VLL +CF    +     RT +    R +  N+            
Sbjct: 365 LPNLILPWNRLAVLAFVLLVLCFTWLIL----NRTRLGMNVRAVTQNRAMAACCGVPTGR 420

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
             + AF + S   G+ G   +   +            I    +V+LGG+  L+    A  
Sbjct: 421 VDMLAFGLGSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVAAAF 478

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
            L    ++                         L+++ + L I  R   L  L+  
Sbjct: 479 GLGIFNKILEPQMGAVLGK-------------ILILVMIILFIQKRPQGLFALKGR 521


>gi|15600105|ref|NP_253599.1| branched chain amino acid ABC transporter membrane protein
           [Pseudomonas aeruginosa PAO1]
 gi|107104011|ref|ZP_01367929.1| hypothetical protein PaerPA_01005084 [Pseudomonas aeruginosa PACS2]
 gi|116053061|ref|YP_793380.1| putative permease of ABC branched chain amino acid transporter
           [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894007|ref|YP_002442876.1| putative permease of ABC branched chain amino acid transporter
           [Pseudomonas aeruginosa LESB58]
 gi|254238370|ref|ZP_04931693.1| hypothetical protein PACG_04508 [Pseudomonas aeruginosa C3719]
 gi|296391749|ref|ZP_06881224.1| putative permease of ABC branched chain amino acid transporter
           [Pseudomonas aeruginosa PAb1]
 gi|313109909|ref|ZP_07795838.1| putative permease of ABC branched chain amino acid transporter
           [Pseudomonas aeruginosa 39016]
 gi|9951189|gb|AAG08297.1|AE004904_5 branched chain amino acid ABC transporter membrane protein
           [Pseudomonas aeruginosa PAO1]
 gi|115588282|gb|ABJ14297.1| putative permease of ABC branched chain amino acid transporter
           [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126170301|gb|EAZ55812.1| hypothetical protein PACG_04508 [Pseudomonas aeruginosa C3719]
 gi|218774235|emb|CAW30052.1| probable permease of ABC branched chain amino acid transporter
           [Pseudomonas aeruginosa LESB58]
 gi|310882340|gb|EFQ40934.1| putative permease of ABC branched chain amino acid transporter
           [Pseudomonas aeruginosa 39016]
          Length = 304

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 87/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P+
Sbjct: 9   MINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLSAIALALLAFFGLQNFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLLFTVLVTCTYGWVIERIAYKPLRNSTRLAPLISAIGMSLILQNYVQVAQGPRQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+      F     FV       ++L+      A +   +R T +    R  + ++K
Sbjct: 129 GIPTLLDGALKFHVGDGFVQLTYTKLFILIASLIGMAVLTYVIRYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFVIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        +L        GM    +  +  F               L L+++ R   
Sbjct: 248 GSLPGAMLGGLVLGVAEAQFSGMVNTDYKDVFAFS-------------LLVLILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|319761905|ref|YP_004125842.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|317116466|gb|ADU98954.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
          Length = 309

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 99/305 (32%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G + L++        IGA +          ++      
Sbjct: 8   IINGLVLGSMYALIALGYTMVYGIIQLINFAHGEVLMIGALTSWSCIGLMQDAMPGAPGW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++       +   +L F  + +A   L  S     ++         +    +  +  +
Sbjct: 68  LMLLLATLVACVVAATLNFAIEKVAYKPLRNSPRLAPLITAIGMSILLQTLAMIVWKPNY 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+    F     +       +L       AS++  +  T +  A R   +N +
Sbjct: 128 --KPYPTLLPAAPFQVGGAVITTTQILILGVTVVALASMVWLVSYTRLGRAMRATAENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + F + +    +AG  +A++       M  F   +   +  + GG+
Sbjct: 186 VAALMGVKPDMVISATFIIGAVLAAIAGIMYASNYGTAQHTM-GFLPGLKAFTAAVFGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  +  G        +L      +        I L +V+ +R   
Sbjct: 245 GNLAGAVVGGLLLGLIEAIGSGYIGVLTGGVLG-----SHYTDIFAFIVLIIVLTLRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|70731037|ref|YP_260778.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68345336|gb|AAY92942.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas fluorescens Pf-5]
          Length = 336

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 54/301 (17%), Positives = 112/301 (37%), Gaps = 15/301 (4%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            L   K      L  V+  L+    +  +       ++  +ILI+ + A   ++++G  G
Sbjct: 6   PLPFAKTQSRGLLWLVIAVLIGLPLVLPSA------TLASEILIFALAALACNLLLGYTG 59

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           LLS    I +  GAY   +L     L ++  +  +A++     +++G  +++  G Y  +
Sbjct: 60  LLSFGQGIFFGAGAYCAALLMIHLQLGLFSALLGAALVGALLALLVGALAIRRTGIYFVM 119

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL  S++   I       T G  G+    R           IR        +    + Y
Sbjct: 120 LTLAFSQMAYFIAYTLSDWTGGDNGLLSVPRPE---------IRIGDTVLLSLADARYFY 170

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +  +  L       +  +   +    IR+N+    ++       K+  F +S A  G+
Sbjct: 171 GFVAVLFLLIFIGARRVIASPFGSTLMAIRENETRAAAIGYDTRHFKILVFMLSGAVTGI 230

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA +A     +       + +  ++ + I+GG  SL         ++ + E    +   
Sbjct: 231 AGALYAMLLHFVPLSNIDLAMSENILIMTIVGGTGSLFGSLLGAGAIVLLGEFLSELWPR 290

Query: 305 Y 305
           +
Sbjct: 291 W 291


>gi|325529171|gb|EGD06147.1| inner-membrane translocator [Burkholderia sp. TJI49]
          Length = 308

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G S+V G +G+++      Y IGAY  ++  +           L
Sbjct: 12  LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGVSAGYPLPL 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS +++G  G  +   + +       +  LI +      L  +  I  G    
Sbjct: 72  VLGAALIVSVIVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +             V        ++     L  ++ L++  + +  A 
Sbjct: 129 ----RDVSVPVLISGAFDIHLGGDFDVTVPYARLLIVCVTIVLMIALTLFISHSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +    + G     +  +++P    F   I   
Sbjct: 185 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L        G     +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|256788376|ref|ZP_05526807.1| branched chain amino acid transport permease [Streptomyces lividans
           TK24]
 gi|289772268|ref|ZP_06531646.1| branched chain amino acid transport permease [Streptomyces lividans
           TK24]
 gi|289702467|gb|EFD69896.1| branched chain amino acid transport permease [Streptomyces lividans
           TK24]
          Length = 310

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 98/308 (31%), Gaps = 13/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---SYVILGSRYGLSIWLL 95
           + +  +   +Y + A G ++V G + L++      +  GA+   +  +     G S+ + 
Sbjct: 8   LVNGLLLGSMYGLVAIGYTMVYGIVQLINFAHGEIFMTGAFGALTVYMYILPDGTSMLIA 67

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +P+  + +      + + + +F    L  A  +        LI    ++        A  
Sbjct: 68  LPLMLIGAVIVSTTVAVGAERFAYRPLRGAPRLAP------LITAIGLSLALQQAVWAWY 121

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                      I    F    V  +    ++ +      A +  ++ RT      +    
Sbjct: 122 PDAKSARPFPQIDGGPFHIGNVTLQTGDIFLFVVAPVSMAILGFFVMRTRTGRGMQATAQ 181

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +      +        + AFA+ + F  + G  +     +I   M  F   +   +  +L
Sbjct: 182 DPDTAKLMGVNTDRIIVIAFALGAVFAAVGGVAYGLRYGQIEFKM-GFILGLKAFTAAVL 240

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++        +L     L                 S+      +++I + L    R
Sbjct: 241 GGIGNIYGAMIGGVVLGVAETLATAYIADIPGLDKFGSQSWADVWAFILLILVLLF---R 297

Query: 336 SHSLLRLR 343
              LL  R
Sbjct: 298 PQGLLGER 305


>gi|311105713|ref|YP_003978566.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310760402|gb|ADP15851.1| inner-membrane translocator 28 [Achromobacter xylosoxidans A8]
          Length = 343

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 54/311 (17%), Positives = 115/311 (36%), Gaps = 15/311 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             L  +   L    F+     + +  ++G +ILIY + A  L++V+G  GL+S    +  
Sbjct: 9   WALPLLFLVLAAVPFVAQWLGEPFYVTLGARILIYALAALALNLVLGFAGLVSFGHAMFL 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G Y+  IL      + WL + V   +     +I+G   L+  G    + TL  +++F 
Sbjct: 69  GLGCYAVGILSYYGFGNGWLQLAVCIAVCALVALIVGTVCLRTSGIGFIMITLAFAQMFY 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +  +                       ++     F    +     +Y+    +  +S
Sbjct: 129 FLAVSLREYGG---------------DDGLNIYEASSFGLFDLGGSQPVYWAAWAVLLVS 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           +  ++ LRR+      R    N +   +L  ++   +L+A+  S    G+AG   A    
Sbjct: 174 SLAMVRLRRSPFGMILRATHANPRRVDALGYSVFGVRLTAYVASGVLTGVAGLLLANLTA 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             SP    +  +  +I +V++GG+ ++          + + E    M  ++   +     
Sbjct: 234 FASPSYMSWPVSGELIVMVVIGGLGNVLGPIVGAVAYLLMEEAFKSMTQHWMLLMGPAVV 293

Query: 315 SFNMRHTTLMV 325
              M       
Sbjct: 294 IIAMVAKGGYG 304


>gi|301057656|ref|ZP_07198734.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [delta proteobacterium NaphS2]
 gi|300448270|gb|EFK11957.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [delta proteobacterium NaphS2]
          Length = 304

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 101/303 (33%), Gaps = 20/303 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++      Y +GA+    L +  G+       +
Sbjct: 15  LVNGITLGGVYALIAVGYTMVYGVIQLINFAHGEVYMLGAFLAYTLVAVVGMPFLPAFLL 74

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I    G+++   + +       +A LI +      L     +  G        ++  
Sbjct: 75  TLIICAVLGVVLDYVAYRPLRKAPRLAALITAIGMSIFLQNMALLIWGSQIKSYPRKVLP 134

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L  +  +           V       ++L         + L + +T I  A R I  ++ 
Sbjct: 135 LFFSETA------LNFGDVTLSWLQLFILSVTLLFMIILHLTIHKTRIGMAMRAISQDKT 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  GMAG       + I P M  +   I   +  +LGG+
Sbjct: 189 ASALMGIGVNRVISFTFAIGSAMGGMAGVLVGLYYNAIFPTM-GYVAGIKAFAAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L     +  G                +     +    +  VIL +   
Sbjct: 248 GSVPGAMLGGGVLGIAEVMGAGYIS-------------SEYRDGISYAVMIAVILFKPSG 294

Query: 339 LLR 341
           L+ 
Sbjct: 295 LIG 297


>gi|260597975|ref|YP_003210546.1| hypothetical protein CTU_21830 [Cronobacter turicensis z3032]
 gi|260217152|emb|CBA30973.1| hypothetical protein CTU_21830 [Cronobacter turicensis z3032]
          Length = 561

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 97/299 (32%), Gaps = 33/299 (11%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGLSIWLLIPVSAMISGACGMI 109
           I  G LG++++       +GAY+   +                 L +PV+ M++   GM 
Sbjct: 288 ITYGLLGVINMAHGEMLMLGAYATWCVQNALAAFAPQWLAFYPVLALPVAFMVTACAGMA 347

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           +    ++          L+ +     +LI+   +T G   + VA+        +   I+ 
Sbjct: 348 LERAIIRHLYGRPLET-LLATWGISLMLIQLVRMTFGAQNVEVANP-----AWLSGGIQV 401

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                      + M +VLL + F   ++     +T +    R +  N+            
Sbjct: 402 LPNLILPWNRLVVMGFVLLVLFFTWLAL----TKTRLGMNVRAVTQNRAMAACCGVPTGR 457

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
             + AF + S   G+ G   A S+             I    +V+LGG+  L+    A  
Sbjct: 458 VDMLAFGLGSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGSVAAAF 515

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
            L    ++                          +++ + L I  R   L  L+  +  
Sbjct: 516 GLGIFNKILEPQVGAVLGK-------------IAILVMVILFIQKRPQGLFALKGRAVE 561


>gi|288918710|ref|ZP_06413057.1| ABC transporter related protein [Frankia sp. EUN1f]
 gi|288349912|gb|EFC84142.1| ABC transporter related protein [Frankia sp. EUN1f]
          Length = 926

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 117/326 (35%), Gaps = 19/326 (5%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
              ++ + +      V   LL +   GAT    +   +  + L   +     ++V G  G
Sbjct: 319 PTEVSPWRRRALWGVVTAGLLAYTAWGAT---DFWAGLLAEGLATAIVLMSFTVVTGIGG 375

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           ++SL  V     GA++  IL S     +   +    +++   G ++ LP+ +  G  LA+
Sbjct: 376 MVSLAQVAFVLAGAFTTGILLSHDVPYLP-ALLAGVIVAALTGAVIALPTRRLGGLPLAL 434

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           +TL ++ I QN+L + + I+NG  G  +                             +M 
Sbjct: 435 STLALAFIGQNLLFQIRDISNGSGGWAIPAP---------------DLGIVDTANPRWMV 479

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            +LL +  L+  ++  LR ++   A   +R +     +    +   KL  F +S+A  G 
Sbjct: 480 VMLLVLLGLTIWLVHALRTSSTGRAMLAVRSSDVGAQTNGIAVGRMKLLVFVISAAIAGF 539

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            G   A +R R++   +     ++ ++  I   +   +    A  +     +    +   
Sbjct: 540 GGVLLATTRGRVTNTDYDAFLGLVWLATTITFSIRRPAGAVLAGLVAALAPQAFENIPDS 599

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFL 330
                + F                 +
Sbjct: 600 THFMQILFGLGAIGLARDPDGALAAI 625



 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/274 (12%), Positives = 72/274 (26%), Gaps = 8/274 (2%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAM 101
            +   +Y + A GL++   + G+ +          AY +  +   +    +   I    +
Sbjct: 12  LVTGALYAILASGLTLTYQTSGVFNFGQGGVAFSTAYLFFQLNTGQGLPVVPSAILCVGV 71

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG-----KAGIYVADRL 156
            + A G ++         D    A ++ +      L       +       +        
Sbjct: 72  FAPALGWLLHRILFNPLRDASIAARMVATLGLLIALPALCLWISAMLREKASLDLPTVED 131

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
            F    +    +      + +I +     +L    F +  +   +RRT I    R     
Sbjct: 132 VFRFPGLGPSPKEIYKLGNGLILDSDKLAILGAAIFSALLLWYLVRRTRIGLEMRASVSR 191

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                        A   ++  S    G+ G   A      +          + I  V+L 
Sbjct: 192 PAIAALRGVDPDRASAVSWITSCGLAGLVGVLLAPMFGLANFTYNTLL--FVSIPAVVLA 249

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
              S+        +L     L  G          
Sbjct: 250 RFASIPIAMAGGLLLGVAQNLVDGYVDLDITGFP 283


>gi|33861528|ref|NP_893089.1| putative membrane protein of urea ABC transport system
           [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
 gi|33634105|emb|CAE19431.1| putative membrane protein of urea ABC transport system
           [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
          Length = 378

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/341 (12%), Positives = 100/341 (29%), Gaps = 31/341 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             +   ++ F+    +    +  ++  + L   + A G+ ++ G  GLLSL   I +A+G
Sbjct: 14  FVIWVLIIAFIIAAPSILPVFRLNLLGRYLSLAIVALGVDLIWGFTGLLSLGQGIFFALG 73

Query: 78  AYSYVILGS-----------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
            Y   +                        ++            +   I  +P+L     
Sbjct: 74  GYCAAMYLQITSSSEFPNNIPEFFGLYGVDNLPFFWEPFRSPIFSLFAIWVIPALVAGIL 133

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
              +    +  ++ +IL +   +            +         + + F         +
Sbjct: 134 GFLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDVTQLFGQMVGSESIQ 193

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
              ++    +   +     W+ +    N    IRD++          +  K   F+++  
Sbjct: 194 RMFFWFTALLVIAAWFFSKWVVKGRFGNILIGIRDDEPRVRFTGYNPVLFKTIIFSIAGG 253

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             G++GA +      +SP       +I ++  V +GG  +L        ++     L   
Sbjct: 254 LAGISGALYTVQSGIVSPQFMTVPFSIEMVIWVAVGGRGTLLGAILGAVLINYAKSLVSE 313

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                         +       +      LV+      +L 
Sbjct: 314 --------------ALPASWMFIQGGLFILVVTALPEGVLG 340


>gi|134294951|ref|YP_001118686.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|134138108|gb|ABO53851.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia vietnamiensis G4]
          Length = 396

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/347 (12%), Positives = 95/347 (27%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 53  VAIGIGVPLAALVAPEASAFHLSAYTMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 112

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 113 FALGGYAIGMYLMREIGRDGKYGSDLPDFMVFLDWHQLPWYWSGTQHLAWALALVVLVPA 172

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            +  +  +          R   FP +
Sbjct: 173 VLAWVFGFFTFRSRVKGVYLSIITQALTFAAMLLFFRNETGFGGNNGFTDFKRIAGFPIT 232

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +  +      L+      +  + +      +RD +     L  + +  KL  +
Sbjct: 233 SPGTRTVLLLLSFATLVLAFIAARAIVSSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 292

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            +S+    +AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 293 TLSAVLCAIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 352

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                               F       + +   LV L+    ++ L
Sbjct: 353 SFFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGL 385


>gi|302335541|ref|YP_003800748.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Olsenella uli DSM 7084]
 gi|301319381|gb|ADK67868.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Olsenella uli DSM 7084]
          Length = 291

 Score = 84.9 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 104/304 (34%), Gaps = 25/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + LL+        +GAY   I+ ++ GL+  L + +
Sbjct: 7   VLNGLQLGSIYALVALGYTMVYGIILLLNFAHGDIIMVGAYISWIVMAQLGLNPILAVIL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S       G+++   +     +   ++ LI +      L     +  G            
Sbjct: 67  SVAGCTLLGVLIDKVAYAPLRNAPRLSILITAIGVSYFLENGAQLVFGADAKV------- 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V S         + +         ++     +A +   ++RT +  A R + ++  
Sbjct: 120 ----VPSYFDATPITFADLQLSPIALLTIVVTVVSTAILTFLVQRTKLGKAMRAVSEDMG 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FAV SA  G+    ++ +  + +P M             +LGG+
Sbjct: 176 AARLMGINVNTTISFTFAVGSALAGIGAVLYSMAYTQATPTM-GIMLGTKAFVAAVLGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++     L   +    +                ++ + L +V++++   
Sbjct: 235 GSIPGAVIGGLLVGFAEVLVSAIGLSVWKDA-------------VVFLLLIIVLIVKPTG 281

Query: 339 LLRL 342
           +L  
Sbjct: 282 ILGR 285


>gi|296533376|ref|ZP_06895975.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
 gi|296266302|gb|EFH12328.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
          Length = 292

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 61/306 (19%), Positives = 124/306 (40%), Gaps = 21/306 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ ++     I+ + A  L++++G  G+ S+   + + +GAY+   L   +   + L  
Sbjct: 3   AYLLNLATLATIFGILAASLNLLIGYAGIFSMAHAVFFGLGAYAGAQLALLWVPDLLLAC 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            + A +S A  + + LP+L+ RG+Y   A+L +  +   +  +   +T G  G+      
Sbjct: 63  LLGAALSAALSLCLALPALRVRGEYFVAASLGLQMMAVTVFSEAHALTGGHGGLVGIPPA 122

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                               +     +  V L +   +  +I  L R +   A   IRD+
Sbjct: 123 T--------------LLGLDLTDPARLLLVCLAVLGGALLLIRLLMRGSFGRALMAIRDS 168

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  +    +   K  A A+  +  G+AGA FA     ++ + F   ++I+V+++VI+G
Sbjct: 169 ESAAEAFGKDVRALKTLAVALGCSLAGVAGALFAFYMAFVNVESFTLEQSILVMAMVIIG 228

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  +L       A  +  V L   +                     +  +A+ L+++ R 
Sbjct: 229 GTATL-------AGPLIGVLLLLLLPAGLSFLPFIPPTQIGAVQQLVYGLAMVLLMIYRP 281

Query: 337 HSLLRL 342
             L  L
Sbjct: 282 AGLAGL 287


>gi|254254445|ref|ZP_04947762.1| branched-chain amino acid ABC transporter permease protein
           [Burkholderia dolosa AUO158]
 gi|124899090|gb|EAY70933.1| branched-chain amino acid ABC transporter permease protein
           [Burkholderia dolosa AUO158]
          Length = 308

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G S+V G +G+++      Y IGAY  ++  +           L
Sbjct: 12  LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGVSAGYPLPL 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS +++G  G  +   + +       +  LI +      L  +  I  G    
Sbjct: 72  VLGAALIVSVIVTGLYGFAVERIAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +             V        ++     L  ++ L++  + +  A 
Sbjct: 129 ----RDVSVPVLISGAFDIHLGGDFDVTVPYARLLIVCVTIALMIALTLFISHSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +    + G     +  +++P    F   I   
Sbjct: 185 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L        G     +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|206576241|ref|YP_002238596.1| urea ABC transporter, permease protein UrtC [Klebsiella pneumoniae
           342]
 gi|288935583|ref|YP_003439642.1| urea ABC transporter permease [Klebsiella variicola At-22]
 gi|290509619|ref|ZP_06548990.1| urea ABC transporter, permease UrtC [Klebsiella sp. 1_1_55]
 gi|206565299|gb|ACI07075.1| urea ABC transporter, permease protein UrtC [Klebsiella pneumoniae
           342]
 gi|288890292|gb|ADC58610.1| urea ABC transporter, permease protein UrtC [Klebsiella variicola
           At-22]
 gi|289779013|gb|EFD87010.1| urea ABC transporter, permease UrtC [Klebsiella sp. 1_1_55]
          Length = 357

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/336 (14%), Positives = 98/336 (29%), Gaps = 27/336 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L L           ++ ++  +IL Y + A  L +V G  G+LSL   I +A+G Y+  
Sbjct: 33  FLALLPASHPLAVPSWLLTLSGKILCYAIVAVALDLVWGYAGMLSLGHGIFFALGGYAMG 92

Query: 83  IL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
           +               S    S                 ++ L        +   A    
Sbjct: 93  MYLMRQAAGDGLPAFMSFLSWSELPWFWWGTQHFAWAMALVVLVPGLLALVFGWFAFRSK 152

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            +     ++       G    +  +  +              FP +       ++   + 
Sbjct: 153 IKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPVTATGTRATLFMATVL 212

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +   L ++        +RD +             KL  + +S+   G+AGA +
Sbjct: 213 LLLLTLWLGSALAQSKFGRILTAVRDAENRLMFCGYDPRGFKLLVWTLSAVLCGLAGALY 272

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                 I+P     + +I     V LGG  +L        ++ G   +            
Sbjct: 273 VPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGLVNGAKSI------------ 320

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
             F  +        + +   +V L     ++ L   
Sbjct: 321 --FTVAMPEYWQLFLGLIFIIVTLFLPRGVMGLLRR 354


>gi|169837103|ref|ZP_02870291.1| inner-membrane translocator [candidate division TM7 single-cell
           isolate TM7a]
          Length = 298

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/302 (16%), Positives = 107/302 (35%), Gaps = 20/302 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      IY + A G ++V G + L++        +GAY   ++    G+ + L I +S
Sbjct: 10  INGLQTGSIYALIALGYTMVYGIVKLINFAHGDILMVGAYVT-LIAVSNGMPLILAIVLS 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +     G+++   + +   +   I+ LI +     +L     I  G        R+   
Sbjct: 69  IIFCAILGVVIDFFAYRPIRNAPKISALITAIGMSFLLESLALIIFGAN-----PRVIDP 123

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                 L    +    F+       +V++       ++ L++++T +  A R +  +  A
Sbjct: 124 KYIPAFLSNDNKMKLGFLEISTLTIFVIVITIICMIALNLFIKKTKLGKATRAVSQDTGA 183

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +       FA+ S    + GA +A    +I P M      +      + GG+ 
Sbjct: 184 AQLMGINVNRTIAITFAIGSGLGALGGALYAIVYPQIEPYM-GMLPGLKAFIAAVFGGIG 242

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        +L  +     G +   + + + F               L L+++ R + L
Sbjct: 243 SIPGAMVGGYVLGLLEAYVKGSSLTTWANPIVFG-------------VLILILIFRPNGL 289

Query: 340 LR 341
             
Sbjct: 290 FG 291


>gi|53720263|ref|YP_109249.1| putative branched-chain amino acid transport system permease
           [Burkholderia pseudomallei K96243]
 gi|126441644|ref|YP_001060081.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|167817041|ref|ZP_02448721.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 91]
 gi|167903910|ref|ZP_02491115.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|167920134|ref|ZP_02507225.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei BCC215]
 gi|226193831|ref|ZP_03789433.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237813473|ref|YP_002897924.1| urea ABC transporter, permease protein UrtC [Burkholderia
           pseudomallei MSHR346]
 gi|254180949|ref|ZP_04887547.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|254196075|ref|ZP_04902500.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|52210677|emb|CAH36661.1| putative branched-chain amino acid transport system, permease
           component [Burkholderia pseudomallei K96243]
 gi|126221137|gb|ABN84643.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|169652819|gb|EDS85512.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|184211488|gb|EDU08531.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|225934136|gb|EEH30121.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237504271|gb|ACQ96589.1| urea ABC transporter, permease protein UrtC [Burkholderia
           pseudomallei MSHR346]
          Length = 400

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 93/347 (26%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 57  IAVGVGVPLAALVAPEASAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 116

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 117 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPA 176

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            Y  +  +          R   F  +
Sbjct: 177 ALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 236

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +          S      +  + +      IRD +     L  + +  KL  +
Sbjct: 237 SPGTRTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 296

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+    +AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 297 VVSAVLCAIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 356

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +                  F       + +   LV L+    ++ L
Sbjct: 357 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 389


>gi|57237904|ref|YP_179152.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni RM1221]
 gi|86150445|ref|ZP_01068670.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|86151086|ref|ZP_01069302.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni 260.94]
 gi|86153187|ref|ZP_01071392.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|88596097|ref|ZP_01099334.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni 84-25]
 gi|148926073|ref|ZP_01809759.1| branched-chain amino-acid ABC transport system permease protein
           [Campylobacter jejuni subsp. jejuni CG8486]
 gi|157415274|ref|YP_001482530.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni 81116]
 gi|205355776|ref|ZP_03222545.1| branched chain amino-acid ABC transport system permease protein
           [Campylobacter jejuni subsp. jejuni CG8421]
 gi|218562633|ref|YP_002344412.1| branched-chain amino-acid ABC transporter permease [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|283956415|ref|ZP_06373895.1| LOW QUALITY PROTEIN: branched-chain amino acid transport system
           permease protein [Campylobacter jejuni subsp. jejuni
           1336]
 gi|57166708|gb|AAW35487.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni RM1221]
 gi|85839040|gb|EAQ56304.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85842256|gb|EAQ59502.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85844072|gb|EAQ61282.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|88190938|gb|EAQ94910.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360339|emb|CAL35135.1| branched-chain amino-acid ABC transport system permease protein
           [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|145845552|gb|EDK22644.1| branched-chain amino-acid ABC transport system permease protein
           [Campylobacter jejuni subsp. jejuni CG8486]
 gi|157386238|gb|ABV52553.1| branched-chain amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 81116]
 gi|205346210|gb|EDZ32844.1| branched chain amino-acid ABC transport system permease protein
           [Campylobacter jejuni subsp. jejuni CG8421]
 gi|283792135|gb|EFC30924.1| LOW QUALITY PROTEIN: branched-chain amino acid transport system
           permease protein [Campylobacter jejuni subsp. jejuni
           1336]
 gi|284926247|gb|ADC28599.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni IA3902]
 gi|307747916|gb|ADN91186.1| High affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni M1]
 gi|315058460|gb|ADT72789.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Campylobacter jejuni subsp. jejuni S3]
 gi|315927978|gb|EFV07300.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315932146|gb|EFV11089.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Campylobacter jejuni subsp. jejuni
           327]
          Length = 298

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 93/303 (30%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++        +GAY+ +   +   +     + +
Sbjct: 10  LVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDIMMVGAYAALFCMTNLNVPFLGALSL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+     + K       I+ LI +      L     +               
Sbjct: 70  AMIFAACVGIATDRIAYKPLRQAPRISLLITAIGISFFLQNLFNMLFTSTPRTFTPP--- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             VI       V      +  +++  L ++    A R +  + +
Sbjct: 127 -------SYFEESVNFGGVITTYGSLMVPALTFVILIAVLWILYKSKYGIAIRALAFDIQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           FA+ SA   + G F+AA+   + P M      +   +  +LGG+
Sbjct: 180 TVNLMGIDANRIIAIVFALGSALAAVGGVFWAANYYSVEPTMGTLI-GLKAFAAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+     +            + F    +        I L  ++L R   
Sbjct: 239 GSVVGAVLGGLIIGFTEVVV-----------VAFFPDLSGFKDAFAFIFLVFILLFRPTG 287

Query: 339 LLR 341
           +L 
Sbjct: 288 ILG 290


>gi|134292089|ref|YP_001115825.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|134135246|gb|ABO56360.1| L-leucine ABC transporter membrane protein / L-valine ABC
           transporter membrane protein / L-isoleucine ABC
           transporter membrane protein [Burkholderia vietnamiensis
           G4]
          Length = 308

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G S+V G +G+++      Y IGAY  ++  +           L
Sbjct: 12  LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGISAGYPLPL 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS +++G  G  +   + +       +  LI +      L  +  I  G    
Sbjct: 72  VLGAALIVSVLVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +             V        ++     L  ++ L++  + +  A 
Sbjct: 129 ----RDVSVPVLISGAFDIHLGGDYDVTVPYARLLIVGVTLVLMIALTLFISHSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +    + G     +  +++P    F   I   
Sbjct: 185 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L        G     +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|293602623|ref|ZP_06685066.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292818995|gb|EFF78033.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 355

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 132/358 (36%), Gaps = 11/358 (3%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           MS   L  +     L  LA++  + L              ++  +IL++++      +++
Sbjct: 1   MSFRLLSGDPPRSPLLALALIAIVALLATAPFLFPGPKSLAVAAKILVFIILVASYDLLL 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           G  G++S    + + IGAY   I          +++  +    M+S A  +++GL SL+ 
Sbjct: 61  GYTGIVSFAHTMFFGIGAYGVAIASIRMEPGWTAVFAGVGAGLMVSLAFALLIGLASLRV 120

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           R  + A+ TL ++  FQ ++ +   +T G+ G+      +            F       
Sbjct: 121 RAIFYAMITLAVAAAFQTLVSQLSTLTGGEDGLNFKVPQWLRPAFRPLSEPVFGVTIDG- 179

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
              I  YY++  +C +   ++L +  +      + IR+N     ++    +  +  +  +
Sbjct: 180 --RIITYYLIAAVCVVLFLMLLRIVNSPFGRVLQAIRENPFRAEAIGYRTVLYRSLSNLL 237

Query: 238 SSAFIGMAGAFFAASRDRISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           ++AF  +AGA +A       PD    F   + ++ ++++GGM ++       ++ +    
Sbjct: 238 AAAFATLAGALYALWLRYNGPDTSLSFEIMLNILLMLVIGGMGTMYGAVVGASLFVFAQS 297

Query: 297 LCCG----MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                   ++                R    + I   + +      +           
Sbjct: 298 YLQDGLHVIHDAVTGVAPLALLFEPDRWLLWLGILFVVSVYYFPTGIAGRLREFARRR 355


>gi|289646551|ref|ZP_06477894.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraD [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 304

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 85/304 (27%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P 
Sbjct: 9   MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGLESFPF 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+      F   S FV       ++L+        +   ++ T +    R  +  +K
Sbjct: 129 GVPTLLEGAWRFEIGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQYRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL        G+    +  +  F               L L+++ R   
Sbjct: 248 GSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFG-------------LLVLILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|162418360|ref|YP_001605868.1| hydrophobic amino acid ABC transporter permease [Yersinia pestis
           Angola]
 gi|162351175|gb|ABX85123.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis Angola]
          Length = 533

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 82/288 (28%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++ S +       + +  +I+      +       
Sbjct: 260 ITYGLLGVINMAHGEMLMLGAYSAYLVQSLFQQFAPHWLALYPLIALPVAFFITAGIGMA 319

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W        GI +      L     + +         +
Sbjct: 320 LER--TVIRHLYGRPLETLLATWGISLMLIQGIRMLFGPQNLEVANPAWLSGGVQVLPNL 377

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+  +  +     L L +T +    R +  N+              + AF +
Sbjct: 378 VLPWNRIAVIAFVIIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGRVDMLAFGL 437

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+LGG+  L+    A   L  + ++
Sbjct: 438 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 495

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
              +       +L                        R   L  L+  
Sbjct: 496 LEPLIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 530


>gi|121610927|ref|YP_998734.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121555567|gb|ABM59716.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 342

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 74/306 (24%), Positives = 125/306 (40%), Gaps = 18/306 (5%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L  L L      +Y   +   I +Y +   GL++VVG  G LS+  V   AIGAY+  IL
Sbjct: 23  LFALALPFLVGNEYQLHVLTLIGVYWVLVAGLNLVVGYAGQLSVGHVGLLAIGAYTLAIL 82

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
             R G+   + + V+ M+ G CG ++GLP+L+  G Y A+ATL  S I    L+    +T
Sbjct: 83  TGRAGIDALMALAVAGMLGGLCGFLLGLPALRLPGFYFAMATLAFSLIVTEQLVAHSTLT 142

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G AG+          T                      YY+++ +      +   + R 
Sbjct: 143 GGGAGMPAPRFAAPFDTARG------------------FYYLVVVIGLAVTWLAWNISRR 184

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                   +RD+  A  ++   ++  KL+ F  S    G+AG  FA+ ++ I+P+ F F 
Sbjct: 185 MWGRGLIALRDSDVAAAAVGIPVLRLKLAVFTFSGVTAGVAGCLFASLQNYITPEAFTFE 244

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
             +     +I+GG  ++      T +L  + E+                 +  +     +
Sbjct: 245 LGMFFFICIIIGGRGNIIGPFAGTVVLTLLPEIAAPFAKLGNLLYSVLLLTAVLLIPKGI 304

Query: 325 VIALFL 330
             AL  
Sbjct: 305 GSALAA 310


>gi|153950567|ref|YP_001401757.1| hydrophobic amino acid ABC transporter permease [Yersinia
           pseudotuberculosis IP 31758]
 gi|152962062|gb|ABS49523.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pseudotuberculosis IP 31758]
          Length = 515

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 82/288 (28%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++ S +       + +  +I+      +       
Sbjct: 242 ITYGLLGVINMAHGEMLMLGAYSAYLVQSLFQQFAPHWLALYPLIALPVAFFITAGIGMA 301

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W        GI +      L     + +         +
Sbjct: 302 LER--TVIRHLYGRPLETLLATWGISLMLIQGIRMLFGPQNLEVANPAWLSGGVQVLPNL 359

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+  +  +     L L +T +    R +  N+              + AF +
Sbjct: 360 VLPWNRIAVIAFVIIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGRVDMLAFGL 419

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+             I    +V+LGG+  L+    A   L  + ++
Sbjct: 420 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 477

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 478 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 512


>gi|325264687|ref|ZP_08131416.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium sp. D5]
 gi|324029979|gb|EGB91265.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium sp. D5]
          Length = 292

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 99/307 (32%), Gaps = 24/307 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      +Y + A G ++V G   +L+        IG++   I  S  G++  L +
Sbjct: 5   SYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGSFVVFITTSATGMNPLLAV 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +S ++    GM++   + K       +A LI +      L     +  G         +
Sbjct: 65  LLSVVVCTILGMVIERLAYKPLRGASPLAVLITAIGVSYFLQNIALLLFGANPKSFTSVV 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +              +       V +  C +   ++    +T    A   + ++
Sbjct: 125 KIPALNLA----------GGKLIISGETIVTIVTCIVIMIVLTMFMKTKPGQAMLAVSED 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ S    +AG    ++   ++P        I      + G
Sbjct: 175 KGAAQLMGVNVNKTISLTFAIGSGLAAIAGVLLCSAYPSLTPYT-GSMPGIKAFVAAVFG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        IL  +  L         +  + F               L +V+L++ 
Sbjct: 234 GIGSIPGALLGGVILGVIEILSKAYISSQLSDAIVFG-------------VLIIVLLVKP 280

Query: 337 HSLLRLR 343
             +L  +
Sbjct: 281 TGILGKK 287


>gi|172063958|ref|YP_001811609.1| inner-membrane translocator [Burkholderia ambifaria MC40-6]
 gi|171996475|gb|ACB67393.1| inner-membrane translocator [Burkholderia ambifaria MC40-6]
          Length = 308

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G S+V G +G+++      Y IGAY  ++  +           L
Sbjct: 12  LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGISAGYPLPL 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS +++G  G  +   + +       +  LI +      L  +  I  G    
Sbjct: 72  VLGAALIVSVIVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +             V        ++     L  ++ L++  + +  A 
Sbjct: 129 ----RDVSVPVLISGAFDIHLGGDFDVTIPYARLLIVCVTLVLMIALTLFISHSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +    + G     +  +++P    F   I   
Sbjct: 185 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L        G     +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|262044363|ref|ZP_06017426.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259038251|gb|EEW39459.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 357

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/336 (14%), Positives = 98/336 (29%), Gaps = 27/336 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L L           ++ ++  +IL Y + A  L +V G  G+LSL   I +A+G Y+  
Sbjct: 33  FLALLPASHPLAVPSWLLTLSGKILCYAIVAVALDLVWGYAGMLSLGHGIFFALGGYAMG 92

Query: 83  IL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
           +               S    S                 ++ L        +   A    
Sbjct: 93  MYLMRQAAGDGLPAFMSFLSWSELPWFWWGTQHFAWAMALVVLVPGLLALVFGWFAFRSK 152

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            +     ++       G    +  +  +              FP +       ++   + 
Sbjct: 153 IKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPVTATGTRASLFMATVL 212

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +   L ++        +RD +             KL  + +S+   G+AGA +
Sbjct: 213 LLLLTLWLGSALAQSKFGRILTAVRDAENRLMFCGYDPRGFKLLVWTLSAVLCGLAGALY 272

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                 I+P     + +I     V LGG  +L        ++ G   +            
Sbjct: 273 VPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGLVNGAKSI------------ 320

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
             F  +        + +   +V L     ++ L   
Sbjct: 321 --FTVAMPEYWQLFLGLIFIIVTLFLPRGVMGLLRR 354


>gi|170290441|ref|YP_001737257.1| ABC-type branched-chain amino acid transport system, permease
           component [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174521|gb|ACB07574.1| ABC-type branched-chain amino acid transport system, permease
           component [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 317

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 63/332 (18%), Positives = 127/332 (38%), Gaps = 26/332 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++   LL   +      ++  ++ +Q+L++   A    ++ G  G  SL       +GAY
Sbjct: 5   LMIAFLLLALIVPPFLDEFSLTVLVQMLMWAYLAMAWDVIGGYGGQFSLGHAAFLGLGAY 64

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  +L   +GL  W+ I ++ +I+GA G ++G  SL+ RG + A+ T+  +E+ Q +L  
Sbjct: 65  TSTLLLEDFGLIPWVGIWIAGIIAGAAGALVGFASLRLRGPFFALGTIAFAELTQLLLTY 124

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
            K IT G  GI               +I    F       +I+ YY++L         + 
Sbjct: 125 LKDITGGPLGI---------------MINETGFEYMMFDKQIYYYYLMLAFAIFGILFLK 169

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI-SP 258
           +  R+    A   +R+++ A  ++   +  AK+   A+S+   GM G  +A     I   
Sbjct: 170 YFERSKFGVALIALREDEDAAEAVGIDVYRAKVLGAAISAFLTGMGGTLYAQWIHYIRPD 229

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            + +   +  + +I ++GG  S         I++ V      +       L        +
Sbjct: 230 TLVRLDFSTQIAAIDVVGGAGSPYGGIIGALIIVPVSLYLNALFGGMIAGLSVLLYGVVL 289

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
               +          +    +           
Sbjct: 290 LIVVV----------LMPGGIYGFLRRFLARR 311


>gi|163758111|ref|ZP_02165199.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Hoeflea phototrophica DFL-43]
 gi|162284400|gb|EDQ34683.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Hoeflea phototrophica DFL-43]
          Length = 329

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 103/302 (34%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
             +     + ++ ++  +  I  +   GL+I +G  GL+S      + +G Y+  IL S 
Sbjct: 22  PLVAHFADEPFLVTLATRATILALAGVGLNIALGLGGLVSFGHAAFFGLGGYAVGILASH 81

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
           +     L+     +      +++ L ++   G    +   +         I         
Sbjct: 82  HQTFEPLMTSPFIINGTNQMLVLWLVAIVVSGIAALLIGALSLRTSGVYFIMITLAFAQM 141

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
              +      + G    S+     FP    +  +  + +   +  +       +      
Sbjct: 142 IYYFAISWPAYGGEDGLSIYVRNAFPGINTLRPLDFFLLCYAVLIVVLIGQWRMTGARFG 201

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
            A + +R N+    +L  +    +L+AF +S    G+AGA +A     +SP M  +  + 
Sbjct: 202 VALQAVRQNEGRVAALGLSPYRIRLAAFVISGMVTGLAGALYADLNRFVSPTMISWHLSG 261

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            ++  +ILGG+  L        + +    L      ++   L     S  +      +  
Sbjct: 262 EIMVFIILGGVARLFGPVVGACLFVLFEHLFGSFTTHWQFFLGAALLSVVLFARGGFIGL 321

Query: 328 LF 329
           + 
Sbjct: 322 VV 323


>gi|158315823|ref|YP_001508331.1| inner-membrane translocator [Frankia sp. EAN1pec]
 gi|158111228|gb|ABW13425.1| inner-membrane translocator [Frankia sp. EAN1pec]
          Length = 816

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 62/337 (18%), Positives = 122/337 (36%), Gaps = 16/337 (4%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           +    ++  L     L +   +   +  +    +  Q ++  +    ++++ G  G +SL
Sbjct: 345 DPRRALITRLIGFAALGVVAIVVLARGDQLWVFLVTQAVVIGIIFLSITVITGMAGQISL 404

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                 AIGA++   L  RY LS+ +   + A I+   G ++ LP  K  G + AIATL 
Sbjct: 405 CQGTFAAIGAFTVFQLVDRYNLSVLMAALIGAAIAAVVGAVLSLPIRKLGGIWTAIATLA 464

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
            +  F  +L+K   I  G + +     +         L     +     +  I +  V+L
Sbjct: 465 FAYFFDAVLVKLSWIGGGDSALLQGTAVPRPVIGPWDLADDKYYLVFASVILIVVAMVVL 524

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +           R+         +R ++    S+  +   A+L AFAVS+   G+ GA 
Sbjct: 525 QL-----------RKGTFGRTLVALRGSEVGAESIGISAGRARLVAFAVSAFIAGLGGAL 573

Query: 249 FAASRDRISPDMFKFSENIIVI-SIVILGGMTSLSKIAKATAILIGVVELC--CGMNFYY 305
            A  ++ ++          +    IV+  G  ++     A A      +L     +  + 
Sbjct: 574 LAIQQENVNYGTNFVPFAALFWVVIVVTLGSRTVRGALNAAASFAVFDQLILKGTVFAWI 633

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMR--SHSLL 340
             S       F +    + V+     I        L+
Sbjct: 634 LRSPTAIPDFFPISGKWVYVLFGLAAIQFARHPEGLV 670



 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 83/259 (32%), Gaps = 4/259 (1%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            +Y + A G  +   + G+ +L       + A    +      +  W  +P   +     
Sbjct: 32  AVYALVALGFVLTYKTSGVFNLAFGAQAYVSA---AMYFKARVIWEWPTVPSVILAVFVM 88

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
             ++GL   +     L  A  +   +    L    P        + A         V   
Sbjct: 89  APLIGLILERLIFRPLRTAPAVARLVVAAGLAVAIPYLFDILADFTAVAGVTPVGVVPDG 148

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
              F  P     Y       +       A ++   R +AI    R + ++ K        
Sbjct: 149 ANVFYDPFGVYAYSRNELVSMGVALVAMAGLVALFRFSAIGVRMRAVVESPKMTELNGIP 208

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
                  ++A+SS F G+AG   A   + ++   F FS  ++ I+   +G +TSL K   
Sbjct: 209 ADRVSALSWALSSLFAGVAGVLIAPRFNTLAAADF-FSLMVVAIAAAAVGRLTSLPKAMA 267

Query: 287 ATAILIGVVELCCGMNFYY 305
              +L  ++         +
Sbjct: 268 GGLLLGIIIAQLNTFLPRW 286


>gi|319745543|gb|EFV97845.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus agalactiae
           ATCC 13813]
          Length = 289

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 102/303 (33%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   IY + A G ++V G + L++      Y +GA+    L +   L+ +L + +
Sbjct: 5   LVNGLILGSIYALLALGYTMVYGIIKLINFAHGDIYMMGAFMGYYLINHLHLNFFLALLI 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + S   G+++   + +       IA LI +     +L        G            
Sbjct: 65  AMLGSAFLGVVIEYLAYRPLRKSTRIAALITAIGVSFLLEYGMVYLVGAD---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I   ++    +        +L     L  ++   +++T +  A R +  +  
Sbjct: 115 -TRAFPQAIHTVKYNLGPITITNVQLIILGIALLLMLTLQFIVQKTKMGKAMRALSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G  G       + + P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAGGVLIGLYYNSVQPLM-GVTPGLKAFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        ++  +  L   +               +     ++   L L+ L+R   
Sbjct: 233 GIIPGATIGGFVIGILETLATALG-------------VSDFRDGIVYAILILIFLIRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|300690695|ref|YP_003751690.1| leucine/isoleucine/valine transporter subunit ; membrane component
           of ABC superfamily [Ralstonia solanacearum PSI07]
 gi|299077755|emb|CBJ50393.1| leucine/isoleucine/valine transporter subunit ; membrane component
           of ABC superfamily [Ralstonia solanacearum PSI07]
          Length = 311

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 97/305 (31%), Gaps = 6/305 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   IY + A G ++V G LG+++        IGA S +   +        L   
Sbjct: 8   IVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMIGAMSALTAINFLQKFFPHLPDW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +I      +     + +  + +A   L  +     ++         +    +      
Sbjct: 68  VTLILALLFAMPVCAIVAYTIERVAYRPLRNAPRLAPLITAIGVSIVLQTLAMMIWSRNP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L              S+          ++L    +   + L + RT +  A R   +NQ+
Sbjct: 128 LTFPQLLPSSPIDIGSTGATITGKEIAIILVSLAVMIGLTLLVNRTKLGRAMRATAENQR 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +     F   + F + +A   +AG   A +       M  F   +   +  +LGG+
Sbjct: 188 VAGLMGVNPNFVISATFMIGAAMAAVAGVMMATNYGNAHFYM-GFIPGLKAFTAAVLGGI 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  L  G        +       +        I L  V+L R   
Sbjct: 247 GNLAGAMVGGVLLGLIEALGAGYIGDLTGGVFG-----SNYQDVFAFIVLIGVLLFRPSG 301

Query: 339 LLRLR 343
           ++  R
Sbjct: 302 IMGER 306


>gi|319763122|ref|YP_004127059.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|330825185|ref|YP_004388488.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317117683|gb|ADV00172.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|329310557|gb|AEB84972.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 295

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 56/311 (18%), Positives = 106/311 (34%), Gaps = 19/311 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +  S      IY + A GL++  G  GLL+   +    +GAY+  I            +
Sbjct: 3   DFAVSTATIAGIYALMALGLNLQAGYAGLLNFGHIAFAGLGAYAAGIGFGLGWA-PLPSL 61

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +   ++   G  M     K   DY  IATL ++EI + I      +T G  GI     L
Sbjct: 62  ALGVGLAMLLGAFMAGLGRKLASDYWGIATLAIAEILRTIATNEGWLTGGANGISAIPAL 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           +       + + F     + +    ++                 L       A R +R+ 
Sbjct: 122 FDSLPRPWNAVAFLALVLAVLAAAAWL--------------CARLGNGRFGRALRLMREE 167

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    L   +   K  A   S+A   + G  +A       P+    SE  ++ ++V++G
Sbjct: 168 PQLATCLGYNLRTLKTRAIMASAAVTALGGFLYAHYMSFAGPEYMLASETFLLWTMVMIG 227

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +   +    A +    +    +  +  + +             L+   L   +L RS
Sbjct: 228 GLGNTLGVLVGVATV----QAAHVLVPFAKDWIGFDSDVAGALRLGLIGAILLACLLWRS 283

Query: 337 HSLLRLRTPSN 347
             L+  +    
Sbjct: 284 EGLVPEKLRKI 294


>gi|227872324|ref|ZP_03990679.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Oribacterium sinus F0268]
 gi|227841831|gb|EEJ52106.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Oribacterium sinus F0268]
          Length = 293

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/307 (15%), Positives = 107/307 (34%), Gaps = 23/307 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      +Y + A G ++V G   +L+        +G Y+  +  ++ GL I L I
Sbjct: 5   SYLLNGISLGSVYAIIALGYTMVYGIAKMLNFAHGDILMVGGYAAFLAFNQMGLGIPLSI 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             S  I  A G+++   + K      ++A LI +     +L     +  G         +
Sbjct: 65  LFSMAICTALGVLVERVAYKPLRSANSLAVLITAIGVSYLLQNIALLLFGANPKSFQSFV 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +             ++        +L    ++  ++L++ +T    A   + ++
Sbjct: 125 KLPALKLAG---------GQLVISGETMVTILVGILVAVVLLLFIHKTKAGQAMLAVSED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ SA   +AG    ++   ++P        I      +LG
Sbjct: 176 KGAATLMGVNVNGTIALTFAIGSALASVAGILLCSAYPTLTPTT-GAMPGIKAFVAAVLG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        +L  +  L         +  + F               L +V+L++ 
Sbjct: 235 GIGSIPGAFIGGILLGVLENLSKAYISSKLSDAIVFS-------------VLIIVLLIKP 281

Query: 337 HSLLRLR 343
             +L  +
Sbjct: 282 SGILGKK 288


>gi|330501700|ref|YP_004378569.1| inner-membrane translocator [Pseudomonas mendocina NK-01]
 gi|328915986|gb|AEB56817.1| inner-membrane translocator [Pseudomonas mendocina NK-01]
          Length = 522

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 91/296 (30%), Gaps = 33/296 (11%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL--------SIWLLIPVSAMISGACGMI 109
           I  G LG++++       +GAY+  ++   +               +P++ +++   GM 
Sbjct: 249 ITFGLLGVINMAHGEMLMLGAYTTYVVQLAFQKLAPGYLALYPLAALPIAFVVTACIGMA 308

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           +    ++          L+ +     ILI+   +T G   + VA+  +  G         
Sbjct: 309 LERTVIRHLYGRPLET-LLATWGISLILIQLVRVTFGAQNVEVANPAWLSGGMQ------ 361

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                  ++       ++    F+     L L +T +    R +  N+            
Sbjct: 362 ---VLPNLVLPYNRIVIIGFALFVVLLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGR 418

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
             + AF + S   G+ G   A S+          S  I    +V+LGG+  L+    A  
Sbjct: 419 VDMMAFGLGSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVLAAF 476

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
            L  V +            +L                        R   L  L+  
Sbjct: 477 GLGVVNKFLEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 519


>gi|294783607|ref|ZP_06748931.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Fusobacterium sp. 1_1_41FAA]
 gi|294480485|gb|EFG28262.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Fusobacterium sp. 1_1_41FAA]
          Length = 295

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 92/306 (30%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG---SRYGLSIWLL 95
           I +      IY + + G ++V G   L++        IGAY  +      S  GL +W+ 
Sbjct: 7   IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYVSLFSIPALSSMGLPVWVS 66

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  + +I    G +    + +   +   I+ LI +      L                  
Sbjct: 67  VIPAIIICAIVGCLAERIAYRPLRNSPRISNLITAIGVSLFLENVFMKVFTPNTRSFPKI 126

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                  +             V         ++    LS ++ L++++T    A      
Sbjct: 127 FTQDPIKL----------GDSVQISFGAVVTIVVTVILSIALQLFMKKTKYGKAMIATSQ 176

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   +   +       FA+ S    +A   + ++  +I P M      I      +L
Sbjct: 177 DYSASALVGINVDRTIQLTFAIGSGLAAVAAVLYVSAYPQIQPLM-GSMLGIKAFVAAVL 235

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  L        IL  V  L              F               L +V+L +
Sbjct: 236 GGIGILPGAVMGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIIVLLFK 282

Query: 336 SHSLLR 341
              +L 
Sbjct: 283 PTGILG 288


>gi|283954568|ref|ZP_06372087.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni 414]
 gi|283793972|gb|EFC32722.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. jejuni 414]
          Length = 298

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 93/303 (30%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++        +GAY+ +   +   +     + +
Sbjct: 10  LVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDIMMVGAYAALFCMTNLNVPFLGALSL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   GM     + K       I+ LI +      L     +               
Sbjct: 70  AMIFAACVGMATDRIAYKPLRQAPRISLLITAIGISFFLQNLFNMLFTSTPRTFTPP--- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             VI       V      +  +++  L ++    A R +  + +
Sbjct: 127 -------SYFEKSVNFGGVITTYGSLLVPALTFVILIAVLWILYKSKYGIAIRALAFDIQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           FA+ SA   + G F+AA+   + P M      +   +  +LGG+
Sbjct: 180 TVNLMGIDANRIIAIVFALGSALAAVGGVFWAANYYSVEPTMGTLI-GLKAFAAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+     +            + F    +        I L  ++L +   
Sbjct: 239 GSVVGAVLGGLIIGFTEVIV-----------VAFLPDLSGFKDAFAFIFLVFILLFKPTG 287

Query: 339 LLR 341
           +L 
Sbjct: 288 ILG 290


>gi|269928784|ref|YP_003321105.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
 gi|269788141|gb|ACZ40283.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
          Length = 370

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 111/337 (32%), Gaps = 13/337 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             L+ +V  LL         + +    +   + I V+    L I  G+ GL+S   V   
Sbjct: 16  FPLIVLVVGLLAIAAGTDLLAGRVFQRVVTVMFINVILVVALQIFTGNSGLMSFAHVAFM 75

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AIGAY  +            L  +          +  +P+L   G   A    ++     
Sbjct: 76  AIGAYGSIWFSLSSQEKRLTLPDMPESWFLHQVHLPFIPALIAAGLVAAAVGAVLGVPLL 135

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      I         A  +      ++         + F I +    +   G   L 
Sbjct: 136 RLRDASFTIA------SFAWLIIVHSVALQWDALTRGSRTVFGIPQYTGLWTATGWMLLF 189

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++    R   +    R  RD++ A +S+  +  + +  A+  S     +AG  +A    
Sbjct: 190 VALAFLFREMPLGLKLRAARDDEAAAWSIGISSAWVRWVAWVFSVFVAAVAGGLWAHFIT 249

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK--- 311
             SP+ F   +  ++++++I+GG  S+S        +    E    +  +          
Sbjct: 250 TFSPNSFYLRQTFLIVAMLIIGGSGSVSGAVIGAVAVSLTSEALRSVENWLNLQRAAQTA 309

Query: 312 ----FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                          ++ +A+  V+++R   L R R 
Sbjct: 310 LGQVIPFQLVGFTEIVIALAMIAVLILRPSGLTRGRE 346


>gi|90415641|ref|ZP_01223575.1| putative high-affinity branched-chain amino acid transport system
           permease protein [marine gamma proteobacterium HTCC2207]
 gi|90332964|gb|EAS48134.1| putative high-affinity branched-chain amino acid transport system
           permease protein [marine gamma proteobacterium HTCC2207]
          Length = 393

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/356 (11%), Positives = 92/356 (25%), Gaps = 36/356 (10%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            K+     L   +   +L   +       +  ++  + L Y   A GL +  G  G+LSL
Sbjct: 7   QKFLSPAELGGFIVLAILLFVVLPLSVDDFRLNLIGKYLSYSFVAMGLVLCWGYGGILSL 66

Query: 69  NCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
              + + IG Y   +                       +                   L 
Sbjct: 67  GQGVFFGIGGYCMAMFLKLEASSVENTAIQSTPGIPDFMDWNQLTELPWFWEPFNSLGLS 126

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNG----------KAGIYVADRLYFLGTTVRSL 166
                L                +   +                I  +  +      +  L
Sbjct: 127 LIAVILVPGLFAFLIGLAMFKRRVGGVYFAIITQAVAAILTILIVGSQGMTGGINGITDL 186

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                +       ++ +Y+V +   F+   +  ++ R+ +      +RD ++        
Sbjct: 187 RTLLGWDIRTDEAKVILYFVCVTFVFICLFLCQFVLRSKLGRLLVAVRDTEERVRFSGYN 246

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +   K+  F  ++    + GA F      +SP       +I ++    +GG  SL     
Sbjct: 247 VDNFKIFIFTFAAMLSAIGGALFTLQVGFMSPSFVGIVPSIEMVIFCAVGGRLSLLGAVY 306

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +                       +        +      V+ +  + L+ L
Sbjct: 307 GALAVNFAKTTLSE--------------AIPELWLFALGGMFIAVVSIFPNGLMGL 348


>gi|325290335|ref|YP_004266516.1| urea ABC transporter membrane protein [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324965736|gb|ADY56515.1| urea ABC transporter membrane protein [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 361

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 51/346 (14%), Positives = 105/346 (30%), Gaps = 27/346 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V + + + L L       +  ++  + + Y + A G+ ++ G  G+LSL   + + +GA
Sbjct: 12  LVFFVIAIALLLAPLFLSDFRVNLLGKFIAYAILAIGIDLIWGYTGILSLGHGVYFGLGA 71

Query: 79  YSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           Y   +                 S    IP            + +           +  L 
Sbjct: 72  YCVAMYLKLEAAGGKVPDFMSWSGLTAIPWFWEPFSNGFFSLMMAVAIPTVLAFVVGYLT 131

Query: 129 MSEIFQNILIKWKPITNGKAG---IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                + + +                           + S    F F  +    ++ +YY
Sbjct: 132 FKNRIRGVYLSILSQALAIIFVVLFVGQQAYTGGTNGLTSFRHMFGFSLANNATQMVLYY 191

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + + +  L+  +   L    I      IRD +             K+  + +S+A  G+A
Sbjct: 192 IAVVLLILTYGLCKMLVGRRIGKILVAIRDGENRVRFSGYNPTAYKVFVYCLSAAIAGLA 251

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA F      ISP       +I ++  V +GG  +L        ++  +           
Sbjct: 252 GAIFVPLVGIISPAEMGIVPSIEMVIWVAIGGKGTLIGAVIGAMVVNALKS--------- 302

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                    SF    +  + +    V+L     ++ L   +    R
Sbjct: 303 -----GISESFPEIWSYFIGLVFIFVVLYMPLGIVGLVRKTAEKYR 343


>gi|307326073|ref|ZP_07605271.1| inner-membrane translocator [Streptomyces violaceusniger Tu 4113]
 gi|306888295|gb|EFN19283.1| inner-membrane translocator [Streptomyces violaceusniger Tu 4113]
          Length = 310

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 98/308 (31%), Gaps = 7/308 (2%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            + + +      +Y + A G ++V G + L++      + IG +  + +         L 
Sbjct: 5   PQTLVNGLTLGALYGLIAIGYTMVYGIVQLINFAHGEIFMIGGFGALTIYIWLPSGTALS 64

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + +  M+ G     + + +   R  Y     L        ++         +  ++    
Sbjct: 65  LALPLMLIGGVIASVAIATAAERFAY---RPLRGGPRLAPLITAIGLSIALQQAVWAFYP 121

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                 +            S +  +    ++L+       ++ L++ ++    A +    
Sbjct: 122 DAKKPRSFPQFEGSSFEIFSDLHIQRGDAFLLIAAPVCMLALGLFVSKSRAGRAMQATAQ 181

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +      +        + AFA+  AF  +A         +I+ +M  F   +   +  +L
Sbjct: 182 DPDTAKLMGINTDRIIVMAFAIGGAFAAVAALSHGLKYGQINFEM-GFIAGLKAFTAAVL 240

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++        +L  V  L      Y  +                    L +V+L+R
Sbjct: 241 GGIGNIYGAMLGGVVLGIVEALA---IKYIQDIPGMDQLGGGAWKDVWAFTLLIVVLLVR 297

Query: 336 SHSLLRLR 343
              LL  R
Sbjct: 298 PQGLLGER 305


>gi|170694147|ref|ZP_02885302.1| inner-membrane translocator [Burkholderia graminis C4D1M]
 gi|170140887|gb|EDT09060.1| inner-membrane translocator [Burkholderia graminis C4D1M]
          Length = 357

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/327 (14%), Positives = 108/327 (33%), Gaps = 26/327 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + +    +    +    +  Y+ S     L+  + A     + G  G+L+L      
Sbjct: 23  IAPVTLWAAAVAAATIVPFFTGAYLLSTIRDALVMGLLALSYDFLWGRAGVLTLGHTTFL 82

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMI--MGLPSLKFRGDYLAIATLIMSEI 132
            +GAY + +   ++G +  + +    +++ A   +    L     R  + AI ++ +  +
Sbjct: 83  GLGAYGFAVATVQFGQAPVVGLITGVVVAAALAAVVGYFLLFAGVRLHFFAIISMAVLIV 142

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            Q +   W+ +T G  G+     L                    +   +  +Y + G   
Sbjct: 143 AQQLATSWQSVTGGDTGVLGIPGLCVKVA----------GHIVDLSGPMASWYAVAGALL 192

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +  ++  + R+        I  N+    +      F  L  F +S+    +AG   AA 
Sbjct: 193 AATGLMWLVCRSRYGRVLAAIATNEWRAKACGYHTSFHLLLVFVMSAVVAAIAGCLMAAC 252

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              ++PD+F       VI  V +GG  +      A  +L  + +         +      
Sbjct: 253 SGVVAPDVFSPLLATEVILWVAIGGRGTTGGPVIAAVVLTLLKQTVSTYTADGWP----- 307

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSL 339
                     ++       +L   + L
Sbjct: 308 ---------LVLGGLFLGCVLFMPNGL 325


>gi|238894646|ref|YP_002919380.1| high-affinity branched-chain amino acid ABC transport system
           inner-membrane translocator [Klebsiella pneumoniae
           NTUH-K2044]
 gi|238546962|dbj|BAH63313.1| high-affinity branched-chain amino acid ABC transport system
           inner-membrane translocator [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
          Length = 524

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 89/296 (30%), Gaps = 33/296 (11%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGLSIWLLIPVSAMISGACGMI 109
           I  G LG++++       IGAYS  ++                 + +PV+ +++   GM 
Sbjct: 251 ITYGLLGVINMAHGEMLMIGAYSCWLVQQALAQLAPQWLAFYPLVALPVAFLVTAGIGMA 310

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           +    ++          L    I   ++   + +   +               +   ++ 
Sbjct: 311 LERTIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNVEVANPA------WLSGGVQV 364

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                        + +VLL +CF    +     RT +    R +  N+            
Sbjct: 365 LPNLILPWNRLAVLAFVLLVLCFTWLIL----NRTRLGMNVRAVTQNRAMAACCGVPTGR 420

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
             + AF + S   G+ G   +   +            I    +V+LGG+  L+    A  
Sbjct: 421 VDMLAFGLGSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVAAAF 478

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
            L    ++                         L+++ + L I  R   L  L+  
Sbjct: 479 GLGIFNKILEPQMGAVLGK-------------ILILVMIILFIQKRPQGLFALKGR 521


>gi|229818483|ref|ZP_04448764.1| hypothetical protein BIFANG_03791 [Bifidobacterium angulatum DSM
           20098]
 gi|229784353|gb|EEP20467.1| hypothetical protein BIFANG_03791 [Bifidobacterium angulatum DSM
           20098]
          Length = 308

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 101/304 (33%), Gaps = 13/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A G ++V G + L++        +GAY  ++              +
Sbjct: 12  IFNGLKIGSVYSLVALGYTMVYGIIRLINFAHGDFIMVGAYVLMLTIPAIIACGLPA-WL 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S + +    + +G+   K     +      M+ +   I +        +           
Sbjct: 71  SVVPAILVCVAVGVLVEKAAYKPVREKGNNMTALITAIAMSLLLENGSQ------AVFGA 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+  +I+        +  +      +L    +  ++ L++  T    A R + ++++
Sbjct: 125 DYQTIPMIIQIPSLTIGDLKIDGATIVTVLLGVIIMIALQLFVSHTKQGKAMRAVSEDKE 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S    +A   +  S  ++S  M      +      +LGG+
Sbjct: 185 ASILMGINVNSTITLTFAIGSGLAAVASLMYCISYPQVS-PMMGAMLGLKAFVAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  V  L           ++    +       ++   L +V+L++   
Sbjct: 244 GSIPGAMVGGLVIGVVESLTKAYIGTITGGVITSAFADA-----IVFGILIIVLLVKPSG 298

Query: 339 LLRL 342
           L+  
Sbjct: 299 LMGE 302


>gi|115359178|ref|YP_776316.1| inner-membrane translocator [Burkholderia ambifaria AMMD]
 gi|170697114|ref|ZP_02888209.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
 gi|171320825|ref|ZP_02909829.1| inner-membrane translocator [Burkholderia ambifaria MEX-5]
 gi|115284466|gb|ABI89982.1| L-valine ABC transporter membrane protein / L-isoleucine ABC
           transporter membrane protein / L-leucine ABC transporter
           membrane protein [Burkholderia ambifaria AMMD]
 gi|170137950|gb|EDT06183.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
 gi|171093925|gb|EDT39042.1| inner-membrane translocator [Burkholderia ambifaria MEX-5]
          Length = 308

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G S+V G +G+++      Y IGAY  ++  +           L
Sbjct: 12  LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGISAGYPLPL 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS +++G  G  +   + +       +  LI +      L  +  I  G    
Sbjct: 72  VLGAALIVSVIVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +             V        ++     L  ++ L++  + +  A 
Sbjct: 129 ----RDVSVPVLISGAFEIHLGGDFDVTIPYARLLIVCVTLVLMIALTLFISHSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +    + G     +  +++P    F   I   
Sbjct: 185 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L        G     +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|229043720|ref|ZP_04191423.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus AH676]
 gi|229109420|ref|ZP_04239015.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus Rock1-15]
 gi|228674046|gb|EEL29295.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus Rock1-15]
 gi|228725619|gb|EEL76873.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus AH676]
          Length = 317

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 58/322 (18%), Positives = 127/322 (39%), Gaps = 31/322 (9%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY   +
Sbjct: 2   LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61

Query: 84  LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           L  R      +  + I  + ++S     I+GL SL+ +  + A+ TL +S++F  +  KW
Sbjct: 62  LFDRQGVSITNFLIGIVAAIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T+G  G        F                         YYV L    +   ++  
Sbjct: 122 RGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVLLRL 162

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++  +
Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVNTTV 222

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F     +  + + ++GG+ +L            +       +  Y+ S L  +     R 
Sbjct: 223 FSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIFERW 273

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
           T ++ +   +V+L+    L+  
Sbjct: 274 TIILGLLYIIVLLVFPKGLVGT 295


>gi|171913404|ref|ZP_02928874.1| inner-membrane translocator [Verrucomicrobium spinosum DSM 4136]
          Length = 391

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/356 (12%), Positives = 100/356 (28%), Gaps = 36/356 (10%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            ++    + L   +       +  ++  + L Y   A GL ++ G  G+LSL   + + +
Sbjct: 14  AISFAVFVALIAIILPLALPIFRLNLVGKYLSYGFVAIGLVLLWGRCGILSLGQGVFFGL 73

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF--- 133
           G Y   +               +            +  L +  +     T     +F   
Sbjct: 74  GGYCMAMFLKLEASDPVSTSIQTTPGIPDFMDWNQITQLPWFWEPFKSFTFASCAVFLLP 133

Query: 134 -------------------QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
                                 +I          GI            +  L     +  
Sbjct: 134 GLIAFIIGWAMFRRRVGGVYFAIITQAIALILSLGIDGNQGFTGGRNGITDLKTLLGWDI 193

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                +  +Y++ + +   SA +  ++  T        +RD +         +   +   
Sbjct: 194 RTTGAQYTLYFLCVFLLLASALLAKYIINTRFGRVLMAMRDREDRVRFSGYDVAMCRTFV 253

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           FA+++   G+ GA F      +SP +     +I ++    +GG  S+        I+   
Sbjct: 254 FALAAMLSGLGGALFVLQVGFMSPSLVGIIPSIEMVIFTAVGGRLSVIGAILGCLIVNF- 312

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                            F  ++      LM      V++     L  +   S  L+
Sbjct: 313 -------------GKTAFSEAYPDAWLYLMGGTFIAVVMFFPDGLAGILDKSGTLK 355


>gi|160881655|ref|YP_001560623.1| inner-membrane translocator [Clostridium phytofermentans ISDg]
 gi|160430321|gb|ABX43884.1| inner-membrane translocator [Clostridium phytofermentans ISDg]
          Length = 291

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 94/303 (31%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      I+ + A G ++V G   +++        +GAYS  I   +  L   + +  
Sbjct: 7   LINGLRTGSIFALIAIGYTMVYGIAKMINFAHGDIIMVGAYSLYIFIEKLNLPPVVAVIF 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G+ +   + K      ++A LI +     +L     +               
Sbjct: 67  TMLVCTILGITIEKVAYKPLRKAPSLAVLITAIGVSYLLQSVALLIFKAT---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 + I         +          +        + L++  T I +A R + ++++
Sbjct: 117 -PIPFSTFIEVPALHIGKITISGITIVTFIVTTVCMILLTLFVNHTKIGSAMRAVSEDKQ 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S    +AG  F +    +          I      + GG+
Sbjct: 176 AAQLMGINVNRTISITFAIGSMLAAIAGILFISQYPSL-RPTLGTLPGIKAFVAAVFGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L  +  L            + F               L LV+L++   
Sbjct: 235 GSIPGAMLGGLLLGVIESLSKAYISTELADAIVFG-------------ILVLVLLVKPSG 281

Query: 339 LLR 341
           LL 
Sbjct: 282 LLG 284


>gi|309776675|ref|ZP_07671649.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915423|gb|EFP61189.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Erysipelotrichaceae bacterium 3_1_53]
          Length = 292

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 92/289 (31%), Gaps = 12/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GAY   I  ++  L  +  + +
Sbjct: 8   LVNGLSIGSIYALIALGYTMVYGIIKLINFAHGDIYMLGAYVGFISIAQLHLGFFPALLM 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  G+++   + K   +   IA LI +      L        G         L  
Sbjct: 68  AMVVCGVLGVVIERIAYKPLRNATRIAALITAIGVSYFLEYSTQKVMGPGVKTYPSVLSN 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V  +    +     VI  I              ++   +R+T I  + R +  +  
Sbjct: 128 QTFHVFGIQIQMQQIYILVITIIL-----------MLALQFIVRKTKIGRSMRAVSVDAD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G  G       + I+P M      I      + GG+
Sbjct: 177 AAKLMGINVDATISYTFAIGSALAGAGGVLVGMYYNTINPLM-GMVPGIKAFVAAVFGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +         +  V  L        +   + +     +       + 
Sbjct: 236 GIIPGAMFGGFFIGIVEALVTAYGSSLYKDAVVYAILILILIIKPAGLL 284


>gi|111222545|ref|YP_713339.1| putative ABC transporter ATP-binding protein [Frankia alni ACN14a]
 gi|111150077|emb|CAJ61772.1| putative ABC transporter ATP-binding protein [Frankia alni ACN14a]
          Length = 937

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 105/278 (37%), Gaps = 9/278 (3%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +        +G    Q    +  I  L++ + A  + +V G  G +SL  +       + 
Sbjct: 343 LLVFGALAVIGLFVLQGQWLTALITSLVFGVIALSMVVVTGYAGQVSLTQLPLAGAAGFL 402

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
              L   + L   +   V+A+ +   G+++GLP+L+ RG  +A+ T  ++   + I  + 
Sbjct: 403 VGPLTDDWHLPFPVAPLVAALFAMVLGVVIGLPALRVRGLTVAVVTFALAYALEAIWFRN 462

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             I                  +           S      +    + L +  L+A  +  
Sbjct: 463 SDI---------VPSSGVDVPSPSLFGWDLGIGSGPSYPRVRFGLLCLVVLALTAVAVAR 513

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           LR + + +    +R N+++  +    +   K+ AFA++S   G+ G      +  I+ D 
Sbjct: 514 LRTSRLGSQMLAVRANERSAAAAGINVTHIKIVAFAIASFIAGVGGCLVGYQQGNITFDP 573

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
                 + + + V + G+TS+S    A  + +  +   
Sbjct: 574 VSAFSGLALFTTVYIAGITSVSGGVLAGFLAVEGLSYL 611



 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/255 (11%), Positives = 70/255 (27%), Gaps = 7/255 (2%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV-----SAM 101
            ++   A  L +   S G+++          AY+Y +L     + +   +P      S +
Sbjct: 30  SVFAALALALVVTYRSSGVVNFATSGLALYAAYTYALLRQGKFMILIPGLPKTVDLGSQL 89

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
              A   +    +         +    +               +       A RL     
Sbjct: 90  GLAAAMALSLAITGVLGLLLYLVVFRPLRTAPPVARAVASIGVSVVFTGLTAARLGTTPL 149

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
           +V  +     +            Y  L +  ++ ++    R T    A R   + +K  +
Sbjct: 150 SVEPIYPSRLWTHGSFRVASDRVYFALTILAVALALGALYRFTRFGLATRAAAETEKGAY 209

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
               +        + + +   G+AG   A     +   +      +  ++  ILG    L
Sbjct: 210 LSGISPDRIAALNWIIGALVAGLAGILIAPIVPLV--PVAYTLFIVPALAAAILGRFQYL 267

Query: 282 SKIAKATAILIGVVE 296
                    +  +  
Sbjct: 268 VPAVVGGLAIGMLQS 282


>gi|288573621|ref|ZP_06391978.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288569362|gb|EFC90919.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 286

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 72/316 (22%), Positives = 137/316 (43%), Gaps = 40/316 (12%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y + + I +LI  + A G+S++ G  G+ +L      A+G+Y+  IL   YG++    
Sbjct: 2   SAYAEGIFILLLINAIAAMGVSLLTGFTGIFTLGHAAYLALGSYTTAILTLDYGIAWLPA 61

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +    +++   G ++GLP+LK  GDY AIA++ ++E  + IL  W+ +TNG  G+   D 
Sbjct: 62  VLAGGIVAMVVGYLIGLPTLKLMGDYYAIASIGLAESIRLILENWQSLTNGARGLAGIDT 121

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
              L                          V L    + A +   L       + +  RD
Sbjct: 122 FTTLP-------------------------VALSFFIVMAIVAFCLINGRFGRSLKACRD 156

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   L   +   ++++ ++S+ + G+AG  +A     I P MF   ++  + ++V+ 
Sbjct: 157 DHVAAALLGFDVAKIRVASLSISALYCGLAGGLYAGFISFIQPMMFDMLKSTEMTAVVVF 216

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S+S     T ++  V EL   ++ Y                  +  + L LV+++R
Sbjct: 217 GGLGSMSGCILGTTVITMVTELFRPISQY---------------RMLIYGLVLVLVMVLR 261

Query: 336 SHSLLRLRTPSNFLER 351
              ++        L+R
Sbjct: 262 PEGMMGQHEIGGLLKR 277


>gi|149913229|ref|ZP_01901763.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. AzwK-3b]
 gi|149813635|gb|EDM73461.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. AzwK-3b]
          Length = 315

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 55/331 (16%), Positives = 104/331 (31%), Gaps = 28/331 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +LA+   L+  L         Y      +I++   +A G +I+ G  GLLSL   + +A 
Sbjct: 8   VLALHGGLVALLIGLHFVLPAYHHGNLARIMVLASYAIGYNILFGYTGLLSLGHALFFAA 67

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G Y   +     G +    +    +        + L +L+  G    I TL+ ++     
Sbjct: 68  GMYGMALTIQHAGFTPAPALLSGIVAGALVSGALALLALRTTGVAFMIVTLMFAQAGYLT 127

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           ++ +   T G  G                           +      Y+  L +  +   
Sbjct: 128 ILYFGEYTRGDEG-------------FVIQTAQRVLWGIDLSDPANRYFAALSLFAICLG 174

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           + LWL R         IR+N++    L       KL A  +S      +GA +       
Sbjct: 175 LSLWLVRAPFGRVLVAIRENEERVRMLGYDTYAHKLGAMVISGTMAAASGAVYGLLFGYA 234

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
                    +I  +  V+LGG  ++      T  +  +++L  G+               
Sbjct: 235 GASFASVQYSIFPLLWVLLGGAGTVLGPFIGTLFMFYLIDLSSGI--------------- 279

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
              +  +  + L  + L     L        
Sbjct: 280 TSAYMLIAGVTLVALTLFAPQGLAGEVRRRI 310


>gi|317121496|ref|YP_004101499.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Thermaerobacter marianensis DSM 12885]
 gi|315591476|gb|ADU50772.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Thermaerobacter marianensis DSM 12885]
          Length = 292

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 91/307 (29%), Gaps = 25/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        IY + A G ++V G + L++      + IGA++     + +GL  +  +  
Sbjct: 8   LLIGLSVGTIYALIALGYTMVYGVIKLINFAHGEVFMIGAFAGYYALTAWGLGFFPALLF 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +S   G+ +   + +   +   +A L  +      L        G         L  
Sbjct: 68  AMAVSSVLGVTIERVAYRRLRNSPRLAALTTAIGVSLFLQYVTIYLRGAQSEAYPALLPN 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +              +    M  +   +            RT +  A R +  + +
Sbjct: 128 RRLELMGASLRMDTVVLLAVAVALMVLLQFIV-----------HRTKVGKAMRAVSFDME 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +  ++     + FA+ SA  G AG  +     RI P M      +      +LGG+
Sbjct: 177 AARLMGISVNRTISATFAIGSALGGAAGVIYGLYYTRIDPLM-GILPGLKAFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  V  L        F     F     +                R   
Sbjct: 236 GSIPGAMVGGLVIGMVETLVSAAGLSLFRDAAAFLILILILLF-------------RPEG 282

Query: 339 LLRLRTP 345
           L     P
Sbjct: 283 LFGRHMP 289


>gi|311695770|gb|ADP98643.1| urea ABC transporter, permease protein UrtC [marine bacterium HP15]
          Length = 374

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/346 (13%), Positives = 97/346 (28%), Gaps = 33/346 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++ V +  L      A     +  ++  + L Y + A  + +V G LG+LSL     +A
Sbjct: 22  AVVLVTFLHLFMPQDSALHVSAFTVTLLGKYLCYALLAVAVDLVWGYLGILSLGHGAFFA 81

Query: 76  IGAYSYVIL-------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
           +G Y+  +                                     ++    +++ L    
Sbjct: 82  LGGYAMGMYLMRQIGDRGVYGDPILPDFMVFLNWQELPWFWHGFDMAWFAFIMVLLAPGL 141

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
               +  +A           +I            +  +  +     +        F    
Sbjct: 142 LALVFGFLAFRSRVTGVYLSIITQALTFALMLAFFRNEMGFGGNNGLTDFKDILGFNLRT 201

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
               + ++        +   I   +  + +       RD +     L   +   +L  F 
Sbjct: 202 DATRLGLFIATGIALAIGYVICRGIVISKLGRVSVACRDAEARTRFLGYRVERVQLFVFV 261

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           VS+   G+AGA +      I+P  F    +I ++  V LGG  +L        ++     
Sbjct: 262 VSAMLAGVAGALYVPQVGIINPSEFSPLFSIEIVVWVALGGRATLYGAVIGAILVNYAKT 321

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +  G+                      +     LV +     +  L
Sbjct: 322 VFTGI--------------MPDAWLFALGGLFVLVTVFLPKGIAGL 353


>gi|260425590|ref|ZP_05779570.1| branched-chain amino acid ABC transporter, permease protein
           [Citreicella sp. SE45]
 gi|260423530|gb|EEX16780.1| branched-chain amino acid ABC transporter, permease protein
           [Citreicella sp. SE45]
          Length = 652

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 104/303 (34%), Gaps = 26/303 (8%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---RYGLSIWLLIPVSAMISG 104
           IY + A GL+I  G +G++++       +GAY+  ++      Y LS+ + +P++  ++ 
Sbjct: 371 IYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQQIIPDYTLSLVVALPLAFAVTF 430

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
           A G+ M    +++   +  + TL+ +      L +      G     +            
Sbjct: 431 AAGVAMERLVIRW-LYHRPLETLLATFGISIALQQLAKNIFGTQARPLTSP--------- 480

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           S +      +  V        + +        I+  L +T I    R +  N     S+ 
Sbjct: 481 SWLDGAWVLNDVVGIANIRIAIFVLALIFLGLILFILNKTRIGLEVRAVTQNPGMAASMG 540

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                  +  F + S   G+AG          S     +     +  +V    + ++   
Sbjct: 541 INPDKINMLTFGLGSGIAGIAGIAIGLYAQVTSEMGANYIVQSFMTVVVGG--VGNVWGT 598

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                ++  + +    +N            S  +   T M++ + L I  R   ++ L+ 
Sbjct: 599 LAGAGLIGILQKGIEFLNP-----------SNTLAAQTYMILFIILFIQFRPKGIVALKG 647

Query: 345 PSN 347
            + 
Sbjct: 648 RAA 650


>gi|187479305|ref|YP_787330.1| ABC transporter permease [Bordetella avium 197N]
 gi|115423892|emb|CAJ50444.1| ABC transporter, permease protein [Bordetella avium 197N]
          Length = 289

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 59/311 (18%), Positives = 123/311 (39%), Gaps = 41/311 (13%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++ + +    + A  + + +   G+L++       IGAY+  +L   Y +S  + +    
Sbjct: 14  NLVLTLGTNALLALSIWLTLA-CGMLAMANAAFMGIGAYAAALLTMNYDVSFPVALAAGM 72

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
                   ++GLP+L+  G YLA+ATL   E+ + +++    IT G  G+    +     
Sbjct: 73  AAPAVVAALIGLPTLRLSGVYLAMATLGFGEVVRVVILNTDTITGGALGLNGIPQ----- 127

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                               +  ++ ++    +   I+  +RR+ I  A+  IR ++ A 
Sbjct: 128 --------------------VTQWWHVVLALVIVLFILWRVRRSKIGRAFDAIRGDETAA 167

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             +   +   K+ AF   +   G+AGA  A     I P+ + F   + ++++ ILGG+ S
Sbjct: 168 GLMGIDVRANKMLAFVAGAMIAGLAGALNAHLTFFIGPNEYGFDRGVEILTMAILGGIGS 227

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L      + I+  + EL  G   +                  +  + L L++L     + 
Sbjct: 228 LVGPVLGSTIITVLPELLRGFADF---------------RLVINGVILVLIVLFLPQGIW 272

Query: 341 RLRTPSNFLER 351
                  +L +
Sbjct: 273 DPARFKRWLRQ 283


>gi|83746664|ref|ZP_00943713.1| LivH [Ralstonia solanacearum UW551]
 gi|207721436|ref|YP_002251877.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|207742584|ref|YP_002258976.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|300703313|ref|YP_003744915.1| leucine/isoleucine/valine ABC transporter subunit membrane
           component [Ralstonia solanacearum CFBP2957]
 gi|83726617|gb|EAP73746.1| LivH [Ralstonia solanacearum UW551]
 gi|206586595|emb|CAQ17182.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206593978|emb|CAQ60905.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|299070976|emb|CBJ42285.1| leucine/isoleucine/valine transporter subunit ; membrane component
           of ABC superfamily [Ralstonia solanacearum CFBP2957]
          Length = 311

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 97/305 (31%), Gaps = 6/305 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   IY + A G ++V G LG+++        IGA S +   +        L   
Sbjct: 8   IVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMIGAMSALTAINFLQKFFPHLPDW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      +     + +  + +A   L  +     ++         +    +      
Sbjct: 68  LTLVLALLFAMPVCAIVAYTIERVAYRPLRNAPRLAPLITAIGVSIVLQTLAMMIWSRNP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L              S+          ++L    +   + L + RT +  A R   +NQ+
Sbjct: 128 LTFPQLLPASPIDIGSTGATITGKEIAIILVSLAVMIGLTLLVNRTKLGRAMRATAENQR 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +     F   + F + +A   +AG   A +       M  F   +   +  +LGG+
Sbjct: 188 VAGLMGVNPNFVISATFMIGAAMAAVAGVMMATNYGNAHFYM-GFIPGLKAFTAAVLGGI 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  L  G        +       +        I L  V+L R   
Sbjct: 247 GNLAGAMVGGVLLGLIEALGAGYIGDLTGGVFG-----SNYQDVFAFIVLICVLLFRPSG 301

Query: 339 LLRLR 343
           ++  R
Sbjct: 302 IMGER 306


>gi|56696709|ref|YP_167070.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56678446|gb|AAV95112.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 339

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 52/336 (15%), Positives = 118/336 (35%), Gaps = 9/336 (2%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +   I+    +   L+           +Y   +     + ++    L + +G+  + +L
Sbjct: 6   AQRRGIVGAALLALILIAIGLAATWFGSRYQLRLVYGAYVNLLVVLALQVFMGNARVTNL 65

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +      IGAY+  I  +   +    L      ++          +L      L    L 
Sbjct: 66  SHSAFMGIGAYAAAICVTPEKIKAISLPDAPWGLNAF--------ALDPVSSALIALVLT 117

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
               +   +   +    G   + +A  +   G  +     F    + F I ++F    ++
Sbjct: 118 GLVAWLVGVFIVRLTGIGATIVSLAVLVIVHGLFLYRTDIFKGNQAFFGIPQLFNLTWVV 177

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
           G+  L   I    R +    A R   D++    ++   I   +L A+ +S   + +AG  
Sbjct: 178 GLAVLVVFITRGFRESRWGVALRASADDEVGAAAMGVDIHRLRLMAWVLSGVLLAVAGIA 237

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +A     IS   F F+   + ++++ILGGM +++     T ++   +E    +       
Sbjct: 238 YAYYLGTISARPFYFNHVFLTLAMLILGGMRTVTGAVLGTFLISFGLEWVRWLETGPVVL 297

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
            +    +  +    L  + + L + +R   L+  R 
Sbjct: 298 GIDLPEALGLSGIVLGGV-IVLTMALRPGGLMGDRE 332


>gi|325168847|ref|YP_004280637.1| ABC transporter transmembrane protein [Agrobacterium sp. H13-3]
 gi|325064570|gb|ADY68259.1| ABC transporter, membrane spanning protein [Agrobacterium sp.
           H13-3]
          Length = 379

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/354 (12%), Positives = 99/354 (27%), Gaps = 42/354 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A     +  +F       ++  +   + L+Y M    +++  G  G+L+L   + + +G
Sbjct: 9   IAAYVLFIAVIFAAPVFGDEFWLNRISKYLVYGMLGVAIALTWGYAGILNLGQGLFFGLG 68

Query: 78  AYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           AY   +                      +W   P +            L           
Sbjct: 69  AYMLAMSLKLSSLTSLQQGSDRPVPDFMLWNAEPGAPTELCCINKGSFLWLPFQSQSVGL 128

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVA----------------DRLYFLGTTVRSLI 167
           +  +++  +    L                                  +      +  L 
Sbjct: 129 VLGIVLPVVIAGALGMLVFRKRISGVFVSIITLALVLLVRLVMVDAQPVTNGFNGLTDLG 188

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                   F  Y    YY+      L+      +  T      + IRD+Q     L   +
Sbjct: 189 WLTIGGIEFDPYSRATYYLCAACLSLTLIGARLIVETRAGMILQAIRDDQLRARYLGFDV 248

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
              ++  F +S+   G+AG  +    +  SP     S ++ ++    +GG +SL      
Sbjct: 249 SLYQVFFFVISAGIAGVAGMLYVVVAEFASPTFMDLSFSVTMVVWAAVGGRSSLLGACIG 308

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             ++  +             + +    +       ++ +   LV+L     L  
Sbjct: 309 AILINMIE------------AEVSETEALVEAWKAIIGLIFVLVVLFMPRGLGG 350


>gi|19704763|ref|NP_604325.1| branched chain amino acid ABC transporter permease [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19715091|gb|AAL95624.1| Branched-chain amino acid transport system permease protein livH
           [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
          Length = 308

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 89/306 (29%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLL 95
           I +      IY + + G ++V G   L++        IGAY+ +     +      IW  
Sbjct: 20  IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYTSLFSIPLFTSMGLPIWTT 79

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  + +I    G +    + +   +   I+ LI +      +                  
Sbjct: 80  VIPAIIICAVIGCLAERIAYRPLRNSPRISNLITAIGVSLFIENVFMKVFTPNTRSFPKI 139

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                 T            + +         +L    LS  + L++++T    A      
Sbjct: 140 FNQAPITF----------GNGINISFGAAITILTTVILSVGLQLFMKKTKYGKAMIATSQ 189

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   +   +       FA+ S    +    + ++  +I P M      I      +L
Sbjct: 190 DYAASELVGINVDRTVQLTFAIGSGLAAVGSVLYVSAYPQIQPLM-GSMLGIKAFIAAVL 248

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  L        IL  V  L              F               L +V+L +
Sbjct: 249 GGIGILPGAVLGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIIVLLFK 295

Query: 336 SHSLLR 341
              +L 
Sbjct: 296 PTGILG 301


>gi|162447360|ref|YP_001620492.1| ABC transporter permease [Acholeplasma laidlawii PG-8A]
 gi|161985467|gb|ABX81116.1| ABC-type transport system, permease component [Acholeplasma
           laidlawii PG-8A]
          Length = 359

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 65/330 (19%), Positives = 135/330 (40%), Gaps = 18/330 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +++  L+ +            +   + ++  +   G SI++G  GL SL      AIG 
Sbjct: 24  ILLFMFLMLVVPLLLGFPASTLTFLTKFMVLSIVGLGFSILLGYTGLASLGTAGFIAIGT 83

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y    + ++   S++++I V   ++   G I+G+ SL+  G YLAI TL +SEI    L 
Sbjct: 84  YVLGFMHNQMNASLFVVIIVGIALALLLGAIVGVISLRIEGMYLAIITLGLSEIIIEFLR 143

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               ITNG  G+ +     F  T               + Y    Y  ++ +  +   + 
Sbjct: 144 NAISITNGNGGLQLQGFSIFGITHST----------VNLEYIQAFYIFIIVVLGIFMLLY 193

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +  +    A   +++N  A  ++  +I+  +L AF +S+    + G  + +      P
Sbjct: 194 SNIVTSQTGRAMLAVKNNTSAAQAMGISILKYRLLAFILSTITALVGGILYVSIDAYTEP 253

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           +++  + ++ +++ +ILGG  S+  +     I+ G+ ++            + F      
Sbjct: 254 NLWTLAISLNILAAIILGGSKSMWGVLIGMFIIFGLRDVV--------LVRVPFFAENGN 305

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                  I + L+I+     L++L     F
Sbjct: 306 AIFFFTGIIVILIIMFYPQGLIKLLEKQWF 335


>gi|110668657|ref|YP_658468.1| ABC-type branched-chain amino acid transport systems, permease
           protein II [Haloquadratum walsbyi DSM 16790]
 gi|109626404|emb|CAJ52864.1| ABC-type branched-chain amino acid transport systems, permease
           protein II [Haloquadratum walsbyi DSM 16790]
          Length = 355

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 61/351 (17%), Positives = 119/351 (33%), Gaps = 48/351 (13%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY----------- 74
           L   +       ++ ++     IY +   GL+I  G  GL++   V  +           
Sbjct: 6   LITLISLPGWSSFLLTVLTIAGIYSLLTVGLNIHYGYTGLINFGHVAFFAAGAYAAALLT 65

Query: 75  ------AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                  IGA     L     +   + +  + +  G     +G+ S +    YLAIAT  
Sbjct: 66  IPPPAQTIGAEYIFGLNLPMPIGFLISLIGATITGGLLSACIGMTSARLGSHYLAIATFA 125

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           ++ IF ++L     +TNG  G+    R                     + +E+  +  ++
Sbjct: 126 LAGIFDSVLENEAWLTNGSFGLNNVPRPGRAAM-------------GAIEWEVLYFIFVI 172

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +      ++  L  +      + +R+N+ A   L   I   KL++FA+  A  G+AG  
Sbjct: 173 IVLVSVMIVLTRLTHSPFGRLLKGVRENEDAAKMLGKDITRVKLTSFAIGGAVAGLAGGL 232

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG--------------- 293
           +A     +    F  S    + + ++LGG+ S S       +LIG               
Sbjct: 233 YAHYIGSVVVQQFVPSVTFTIWAALLLGGVASNSGAIFGAFLLIGFQESTRFLSNIYDGL 292

Query: 294 ---VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              + E+           L             ++ + +  VI  +   +  
Sbjct: 293 LAVLPEIIANTLRILIQPLPDHPSFVPSLRFVVIGVLIVCVIRYQPEGVFG 343


>gi|218529487|ref|YP_002420303.1| urea ABC transporter permease UrtC [Methylobacterium
           chloromethanicum CM4]
 gi|254560409|ref|YP_003067504.1| Branched-chain amino acid ABC transporter permease
           [Methylobacterium extorquens DM4]
 gi|218521790|gb|ACK82375.1| urea ABC transporter, permease protein UrtC [Methylobacterium
           chloromethanicum CM4]
 gi|254267687|emb|CAX23534.1| putative Branched-chain amino acid ABC transporter, permease
           protein [Methylobacterium extorquens DM4]
          Length = 373

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/341 (12%), Positives = 93/341 (27%), Gaps = 30/341 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
                       + A  S  ++ +      IY M A  +S+  G  G+L+L   IA+ + 
Sbjct: 15  AVYGLFFASIALIPAFVSDGFLLNQFAVYGIYGMLALSISLCWGFGGILNLGQGIAFGLA 74

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   +                 M++ +   +       +      +  LI+  +F  + 
Sbjct: 75  AYGMAMTMQMQSQDPESNPIPPFMLNNSLEHLPWFWQPFWSTGGGILLALIVPTLFYVVF 134

Query: 138 IKWKPITNGKAGIYVAD----------------RLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                        +                           +        F +    Y  
Sbjct: 135 GTLMFRARVSGPFFAIMSLAMLSAFATLILDMQPYTNGANGISPPAPLSMFGADIDPYGP 194

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             Y+++ G+          L ++      + +R + +    L   +   +   +A+S   
Sbjct: 195 AAYWIVCGLLIAVTVGAKLLTQSKFGLVVQALRGDPERVRFLGYNVALYETVIYAISGFI 254

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
             +AG  +      +SP     + +I ++    +GG  SL        ++ G        
Sbjct: 255 AALAGCLWVMLIQYVSPAQLDTTFSIGMVIWAGIGGRLSLLGAILGAFLIQGGQSYL--- 311

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         F      ++     +V+      L  L
Sbjct: 312 -----------GDQFLATWLLMLGAFFIVVVRFLPKGLAGL 341


>gi|328953530|ref|YP_004370864.1| ABC-type transporter, integral membrane subunit [Desulfobacca
           acetoxidans DSM 11109]
 gi|328453854|gb|AEB09683.1| ABC-type transporter, integral membrane subunit [Desulfobacca
           acetoxidans DSM 11109]
          Length = 287

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 99/305 (32%), Gaps = 25/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A G +++ G LGL++      Y  GA++ V+L S Y ++ ++    
Sbjct: 6   ILNGLTAGSVYALIALGYTMIYGILGLINFAQGEIYMAGAFAAVLLLSAYQVNFFVACLF 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++   G+ +   + +       +  LI +     +L     +  G            
Sbjct: 66  GMGVAVLVGVALERFAFRPLRGAHPLVPLISAIGASILLQSLALLLFGPE---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +  +   F     +          + +   F    +++++R T    A      +Q 
Sbjct: 116 -DRSFPTHFEFAALDVAGASISTLQAAIFISALFFMILLMVFVRYTRFGKAIVATALDQD 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + SA  G AG   A   +  +         +   S  +LGG+
Sbjct: 175 TARLMGINVDRMITLTFVIGSALSGAAGIMMAIYYN-ATYPRMGLLPGLKAFSAAVLGGV 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        IL     L        +   + F               L +V+L+R   
Sbjct: 234 GNIPGAIIGGLILGVAENLGAAYLSSGYKDAIAF-------------AILIVVLLVRPRG 280

Query: 339 LLRLR 343
           LL  R
Sbjct: 281 LLGSR 285


>gi|197124774|ref|YP_002136725.1| inner-membrane translocator [Anaeromyxobacter sp. K]
 gi|196174623|gb|ACG75596.1| inner-membrane translocator [Anaeromyxobacter sp. K]
          Length = 352

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 110/337 (32%), Gaps = 27/337 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + +   +L  +      L  L +    S      + + + + V+ A  L++V G  G  S
Sbjct: 1   MARARAVLRSVLPFAVGLPILLVFQAFSPPDYTLILVNVGVNVILAVSLNVVNGFTGQFS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      A+GAY+   +   +       +P +            + +L         A  
Sbjct: 61  LGHAGFMAVGAYTAAKITLAFSGVQLAFLPAAV-------SDQLVFALALAASMATAAAA 113

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                  ++ ++   +     G     R                      +        +
Sbjct: 114 GFLVGMPSLRLRGDYLAIVTLGFGEIIRSLIENMKFLGQA-----TGLSGLPPYTNIAWV 168

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                 +  +   L  +    A   IR+++ A  ++       K+ AF +SSA+ G+AG 
Sbjct: 169 GVSAIATVVMARRLAVSTQGRALFAIREDEVAAEAMGVDTTGYKVRAFVISSAYAGLAGG 228

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A +    +P MF F  +I V+ +V+LGG+ S++    A  +L   +E       Y   
Sbjct: 229 LIAHAILLTTPRMFTFVRSIEVVVMVVLGGLGSITGSVVAAVVLTVALEGLREFQQY--- 285

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                               L +++L+R   +   R 
Sbjct: 286 ------------RMVAYAAGLIVLMLLRPQGIFGTRE 310


>gi|116249108|ref|YP_764949.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253758|emb|CAK12152.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 379

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/354 (12%), Positives = 98/354 (27%), Gaps = 42/354 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A     +  +F       ++  +   + L+Y M    +++  G  G+L+L   + + +G
Sbjct: 9   VAAYVLFIAVIFAAPVFGDEFWLNRISKYLVYGMLGVAIALTWGYAGILNLGQGLFFGLG 68

Query: 78  AYSYVILGSR--------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           AY   +                      +W   P +            L           
Sbjct: 69  AYMLAMSLKLSSLTSLQQGSDKPVPDFMLWNAEPGAPTELCCINKGSFLWLPFQSQSVGL 128

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVA----------------DRLYFLGTTVRSLI 167
           +  +++  +    L                                  +      +  L 
Sbjct: 129 VLGIVLPVVIAGALGMLVFRKRISGVFVSIITLALVLLVRLVVVDAQPVTNGFNGLTDLG 188

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                   F  Y    YY+      L+      +  T      + IRD+      L   +
Sbjct: 189 WLTIGGIEFDPYSRATYYLCATCLSLTLIGARLIVETRAGMILQAIRDDHVRARYLGFDV 248

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
              ++  F +S+   G+AG  +    +  SP     S ++ ++    +GG +SL      
Sbjct: 249 SLYQVFFFVISAGIAGVAGMLYVVVAEFASPTFMDLSFSVTMVVWAAVGGRSSLLGACIG 308

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             ++  +             + +    +       ++ +   LV+L     L  
Sbjct: 309 AILINMIE------------AEVSETEALVEAWKAIIGLIFVLVVLFMPRGLGG 350


>gi|330809106|ref|YP_004353568.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327377214|gb|AEA68564.1| putative branched-chain amino acid ABC transporter, permease
           component [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 354

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 71/320 (22%), Positives = 132/320 (41%), Gaps = 16/320 (5%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVI 83
           + F+ L    +  +++++ I  L+  +   GL+++ G  G  S+      A+GA+ +Y +
Sbjct: 34  VAFVGLPWLGNDYWLNAILIPFLVLSLAGLGLNLLTGYTGQTSVGAAGFMAVGAFATYGL 93

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L    GL + L +    +I+G  G++ G+PS + +G YL + TL      + +  K+   
Sbjct: 94  LLRVPGLPLPLALLGGGVIAGLVGLLFGIPSSRIKGFYLMVTTLAAQFFLEWVFAKFPWF 153

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
            N  +   ++     L                 +   +  Y + L    L   + + L R
Sbjct: 154 YNYASSGTISAPRLELFGH-------------NLATPVGRYLLTLSCVVLLTWVAINLVR 200

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFK 262
           + +   W  IRD   A   +   +   K  AFAVSS ++G+AGA +A A     S   F 
Sbjct: 201 SQVGRNWMAIRDMDTAASVIGIAVERDKRMAFAVSSFYLGIAGALWAFAYLGTASAGSFD 260

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + +  ++ I+I+GGM S++      A +  V  L      + FN  +            
Sbjct: 261 INRSFQILFIIIIGGMGSIAGAFIGAAFISLVPILLSHAGQWLFNGNVDAG-QLQNLQKV 319

Query: 323 LMVIALFLVILMRSHSLLRL 342
           L    +   ++     L RL
Sbjct: 320 LFGGLIIWFLIKEPEGLARL 339


>gi|326775961|ref|ZP_08235226.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|326656294|gb|EGE41140.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 663

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 54/322 (16%), Positives = 115/322 (35%), Gaps = 14/322 (4%)

Query: 2   SIFSLRLNKYDKILCL--LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIV 59
           S    R+ +          A +  LL+ L         Y  S+    L   + A  ++I+
Sbjct: 314 SRVPARIGRLPGGAAWWRAAPLLVLLVVLISLPALLDAYSISLAGSALALGLLAVSVTIL 373

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
            G  GL +L     +A+GAY+   L         + + +SA+ +     ++G   ++ RG
Sbjct: 374 TGYAGLPTLGQTAPFAVGAYATANLAEAGWTVGPVQLALSALAAAVFAAVVGPAVIRARG 433

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
             + + TL + E+   ++ + + +T G  G+        L            +    ++ 
Sbjct: 434 TTVLMITLAVGELTGAVVNQLRSVTGGADGLVGFPATRAL------------WGGEEMLE 481

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
           E  +Y   L +  ++ S+ L + R+         R  +    +    +    L A   + 
Sbjct: 482 ESELYTYALVVAVVAVSVTLLVLRSPAGKLLTGTRGAEARMRASGHPVGRYLLVAHICAG 541

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  G+ G+     +  ++P    F      +  V++GG TS+        +++   +   
Sbjct: 542 ALAGVGGSLMVTVQQYLAPADVGFEIAAFALLAVVIGGTTSVIGALLGAGLIVATRDWVA 601

Query: 300 GMNFYYFNSLLKFDCSFNMRHT 321
           G    +   LL       +   
Sbjct: 602 GSWPGHGPLLLGVLFVATVYLL 623



 Score = 40.2 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 77/272 (28%), Gaps = 13/272 (4%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           L+  + A GLS+  G+ G+L+L+    YAIGAY+   L       + L +      +   
Sbjct: 19  LLLFVVAAGLSLAFGTAGVLNLSHGTLYAIGAYTGAELSDGTWGGLALGLAAGTAAACLA 78

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G  +   +            L+   +          +                   +   
Sbjct: 79  GAGLSAATAPLARRGHLAQALLTFGLALIGGDLLIQVFGADELPVRVPEALDSSVMLLGH 138

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                       Y  +    ++    L+A     L RT +  A R   D+ +   +    
Sbjct: 139 R-----------YPAYRLCFIVMAVLLAAFGTWVLTRTRMGAAVRAAADDPQMLAATGRN 187

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
                    A + A  G AG   A                 +V+ ++    + SL     
Sbjct: 188 PRAVHTGVLAAAGALAGAAGVLGAPIIGPGPGTSENVLMLSLVVVVLGG--LRSLWATFF 245

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           A   +  V  L   +       LL    +  +
Sbjct: 246 AAIAVGEVQTLGVALAPDLAPYLLFAAMAAVL 277


>gi|262066270|ref|ZP_06025882.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Fusobacterium periodonticum ATCC 33693]
 gi|291380040|gb|EFE87558.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Fusobacterium periodonticum ATCC 33693]
          Length = 295

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 93/306 (30%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG---SRYGLSIWLL 95
           I +      IY + + G ++V G   L++        IGAY  +      S  GL +W+ 
Sbjct: 7   IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYVSLFSIPALSSMGLPVWVS 66

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  + +I    G +    + +   +   I+ LI +      +                  
Sbjct: 67  VIPAIIICAIVGCLAERIAYRPLRNSPRISNLITAIGVSLFIENVFMKIFTPNTRSFPKI 126

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                 +            + +         +L    LS ++ L++++T    A      
Sbjct: 127 FTQEPISF----------GNGINISFGAVVTILTTLVLSVALQLFMKKTKYGKAMIATSQ 176

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   +   +       FA+ S    +A   + ++  +I P M      I      +L
Sbjct: 177 DYAASELVGINVDRTIQLTFAIGSGLAAVASVLYVSAYPQIQPLM-GSMLGIKAFVAAVL 235

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  L        IL  V  L              F               L +V+L +
Sbjct: 236 GGIGILPGAVMGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIIVLLFK 282

Query: 336 SHSLLR 341
              +L 
Sbjct: 283 PTGILG 288


>gi|326804268|ref|YP_004322086.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650481|gb|AEA00664.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Aerococcus urinae ACS-120-V-Col10a]
          Length = 292

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 94/289 (32%), Gaps = 12/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G +GL++      Y +GA+    L +  G+ ++  + +
Sbjct: 8   LINGVALGSIYALMALGYTMVYGIIGLINFAHGDIYMVGAFVGFTLITNVGMGVFPALIL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+I+   + K       IA LI +     +L        G            
Sbjct: 68  AMLFTAVLGVIIERVAYKPLRGATRIAALITAIGVSMLLQNVMIFLRGPE---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 + +  +               +L     L  ++ + +++T +  A R +  +  
Sbjct: 118 -VRAFPADLPDWSLQLGSFTINSQQILILAVTIILMIALQVIVQKTKLGQAMRAVSVDPD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +           F + SA  G AG       + ISP M   +         ++GG+
Sbjct: 177 AAQLMGINANTIISFTFLIGSALAGAAGVLVGIYYNSISPLM-GVNIGTKTFVAAVVGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            S+        I+  V      +    +     +     +       + 
Sbjct: 236 GSIPGAVLGGLIIGIVETFVSMIGLSTWKDAAVYIILIIILLVKPTGLL 284


>gi|309802634|ref|ZP_07696738.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Bifidobacterium dentium JCVIHMP022]
 gi|308220698|gb|EFO77006.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Bifidobacterium dentium JCVIHMP022]
          Length = 308

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 99/304 (32%), Gaps = 13/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A G ++V G + L++        +G+Y  ++          L   +
Sbjct: 12  IFNGLKIGSVYSLVALGYTMVYGIIRLINFAHGDFIMVGSYVLMLTI-----PFILACGL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A ++    +++ +                       ++         + G        +
Sbjct: 67  PAWLAVVPAILVCVAVGVIVEKAAYKPVREKGNNMTALITAIAMSLLLENGSQAIFGADY 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V ++I+        +  +      +L    +  ++ L++  T    A R + ++++
Sbjct: 127 QT--VPTVIQIPTLALGGLKIDGATILTVLLGLVIMVALQLFVTYTKQGKAMRAVSEDKE 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S    +A   +  S  ++S  M      +      +LGG+
Sbjct: 185 ASILMGINVNSTITLTFAIGSGLAAVASLMYCVSYPQVS-PMMGAMLGLKAFVAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  V  L           ++    S       ++   L +V+L++   
Sbjct: 244 GSIPGAMVGGLVIGVVESLTKAYIGTITAGVITSAFSDA-----IVFGILIIVLLVKPSG 298

Query: 339 LLRL 342
           L+  
Sbjct: 299 LMGE 302


>gi|257126943|ref|YP_003165057.1| inner-membrane translocator [Leptotrichia buccalis C-1013-b]
 gi|257050882|gb|ACV40066.1| inner-membrane translocator [Leptotrichia buccalis C-1013-b]
          Length = 298

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/302 (15%), Positives = 110/302 (36%), Gaps = 20/302 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      IY + A G ++V G + L++        +GAY+  ++    G+ + + I +S
Sbjct: 10  INGLQTGSIYALIALGYTMVYGIVKLINFAHGDILMVGAYAT-LIAVSNGMPLIVAIILS 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            ++    G+++   + +   +   I+ LI +     +L     I  G        ++   
Sbjct: 69  IVLCAILGVVIDFFAYRPIRNAPKISALITAIGMSFLLESLALIIFGAN-----PKVIDQ 123

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                 L    +    F+   +   +V++       ++ L++++T +  A R +  +  A
Sbjct: 124 KYIPAFLSNNNKINLGFLSISMLTIFVIVVTSICMIALNLFIKKTKLGKATRAVSQDTGA 183

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +       FA+ S    + GA +A    +I P M      +      + GG+ 
Sbjct: 184 AQLMGINVNKTIAITFAIGSGLGALGGALYAIVYPQIEPYM-GMLPGLKAFIAAVFGGIG 242

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        +L  +     G +   + + + F               L L+++ R + L
Sbjct: 243 SIPGAMVGGYVLGLLEAYVKGSSLTTWANPIVFG-------------VLILILIFRPNGL 289

Query: 340 LR 341
             
Sbjct: 290 FG 291


>gi|167570934|ref|ZP_02363808.1| putative amino acid ABC transporter, permease protein [Burkholderia
           oklahomensis C6786]
          Length = 361

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/347 (13%), Positives = 96/347 (27%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 18  IAVGVGVPLAALVAPESSAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 77

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 78  FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHQLPWYWSGTGYLAYALALVVLVPA 137

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            Y  +  +          R   F  +
Sbjct: 138 AVAWVFGFFTFRSRVKGVYLSIITQAATFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 197

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  ++ +       S      +  + +      IRD +     L  + +  KL  +
Sbjct: 198 SPGTRTVLFLMTFATLVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 257

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+   G+AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 258 VVSAVLCGIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 317

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +                  F       + +   LV L+    ++ L
Sbjct: 318 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 350


>gi|220920270|ref|YP_002495571.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219944876|gb|ACL55268.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 441

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 52/336 (15%), Positives = 124/336 (36%), Gaps = 32/336 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            ++  +   +    + +      +     +M   + I V+FA   ++++G  GLLS    
Sbjct: 29  SRLGAVAPWLAASAILVAAPHVFTSGASLTMMSLMGIMVVFALSYNMLLGQTGLLSFGHA 88

Query: 72  IAYAIGAY-----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           + Y +GA+       V+  +R  + +  +  V A+   A G + G  S +  G   A+ +
Sbjct: 89  VYYGLGAFFTVHAMNVVAAARLPVPLVAMPLVGAVAGLAFGFLFGTVSTRRAGTVFAMIS 148

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L ++E+  +          G+ G+              +  +  R        +I +YY+
Sbjct: 149 LGLAELVTSGSHILHSFFGGEEGVT------------TNRTKMLRLFDLSFGPQIQVYYL 196

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           + G C + A ++  + RT +      +R+N +    +       +L AF +S+ F G+AG
Sbjct: 197 IAGWCLVCALLMYGITRTPLGRLCNAVRENPERVEFIGYEPQLVRLVAFCLSALFAGVAG 256

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A  A + + ++       ++ +V+    +GG+           ++  +      +   + 
Sbjct: 257 ALAAINFEIVNSSYLGLQQSGVVLLAAFIGGIGHFVGPVIGAVLVTILQVSLSDLTEVW- 315

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                              +    +++     +  L
Sbjct: 316 --------------QLYFGLLFIAIVMFAPGGIAGL 337


>gi|153951345|ref|YP_001397904.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. doylei 269.97]
 gi|152938791|gb|ABS43532.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Campylobacter jejuni subsp. doylei 269.97]
          Length = 298

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 94/303 (31%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++        +GAY+ +   +   +     + +
Sbjct: 10  LVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDIMMVGAYAALFCMTNLNVPFLGALSL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+     + K       I+ LI +      L     +         A     
Sbjct: 70  AMIFAACVGIATDRIAYKPLRQTPRISLLITAIGISFFLQNLFNMLFTSTPRTFAPP--- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             VI       V      +  +++  L ++    A R +  + +
Sbjct: 127 -------SYFEESVNFGGVITTYGSLMVPALTFVILITVLWILYKSKYGIAIRALAFDIQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           FA+ SA   + G F+AA+   + P M      +   +  +LGG+
Sbjct: 180 TVNLMGIDANRMIAVVFALGSALAAVGGVFWAANYYSVEPTMGTLI-GLKAFAAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+     +            + F    +        I L  ++L R   
Sbjct: 239 GSVVGAVLGGLIIGFTEVVV-----------VAFFPDLSGFKDAFAFIFLVFILLFRPTG 287

Query: 339 LLR 341
           +L 
Sbjct: 288 ILG 290


>gi|91978325|ref|YP_570984.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91684781|gb|ABE41083.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 383

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/328 (14%), Positives = 94/328 (28%), Gaps = 36/328 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             +  ++  + L Y   A GL +  G  G+LSL   + + +G Y   +       S+   
Sbjct: 31  DVFRLNLVAKYLTYAFVALGLVLCWGFGGILSLGQGVFFGLGGYGMAMYLKLEASSVANT 90

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF---------------------- 133
              S            +  L          TL +  I                       
Sbjct: 91  KIQSTPGIPDFMDWNQITQLPLFWQPFHSLTLTILAILIVPTLFAYLVGAAMFKRRVGGV 150

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
              +I           I            +  L     +       ++ +Y+V +   F 
Sbjct: 151 YFAIITQAIAAILTILIIGQQGYTGGINGITDLRTLKGWDIRPDHTKVILYFVEVAFLFG 210

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              + L++R   +      +R+ +        ++   K+ AF +++ F  + GA F  + 
Sbjct: 211 CILLALFVRHAKLGRILVAMREKEDRVRFSGYSVANFKIFAFCLAAMFAAIGGAMFTLNV 270

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             +SP       +I ++    +GG  S+      T ++                      
Sbjct: 271 GFMSPSFVGIVPSIEMVIYTAVGGRMSIFGAIYGTLLVNFAKTSLSE------------- 317

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
            SF       +      V+L+  + L  
Sbjct: 318 -SFPQLWLFGLGALFIAVVLIFPNGLAG 344


>gi|73541670|ref|YP_296190.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72119083|gb|AAZ61346.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 358

 Score = 84.1 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 53/310 (17%), Positives = 114/310 (36%), Gaps = 7/310 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +V  +L               +M  +I I+V+      +++G  G++S    + +
Sbjct: 14  LLGAMLVLIVLALACAPFVFPGARALNMAAKICIFVVLVGSYDLLLGYTGIVSFAHTMFF 73

Query: 75  AIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
            IG Y   I  SR      ++      +  +S     ++GL SL+ R  + A+ TL ++ 
Sbjct: 74  GIGGYGVAIAMSRMEPGWGALLAGTVAALAVSAVLAFLIGLFSLRVRAIFFAMITLAVAT 133

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            F  ++ +    T G+ G+                  +F  P +    ++  YY++    
Sbjct: 134 AFATLISQLSEWTGGEDGLTFKVPEALRPGFSLGDAEWFGAPLNG---KLLSYYLVFAGA 190

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L   ++L +  +      + IR+N     ++    +  +  +  +S+ F  MAG   A 
Sbjct: 191 VLLFLLLLRIVNSPFGRVLQAIRENDFRAEAIGYRTVVYRTVSTVLSAIFATMAGVLMAI 250

Query: 252 SRDR-ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                       F   + ++ IV++GGM +L      T + +        +     ++ +
Sbjct: 251 WLRYNGPDTSLSFEIMVDILLIVVIGGMGTLYGAVIGTTLFLLAQTYLQDVMKLASDATV 310

Query: 311 KFDCSFNMRH 320
                  + H
Sbjct: 311 SVPLLAGLLH 320


>gi|262038960|ref|ZP_06012298.1| high-affinity branched-chain amino acid transport system permease
           protein BraD [Leptotrichia goodfellowii F0264]
 gi|261747014|gb|EEY34515.1| high-affinity branched-chain amino acid transport system permease
           protein BraD [Leptotrichia goodfellowii F0264]
          Length = 298

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 103/302 (34%), Gaps = 20/302 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      IY + A G ++V G + L++        +GAY+  ++    G+   L + +S
Sbjct: 10  INGLQTGSIYALIALGYTMVYGIVKLINFAHGDILMVGAYA-ALVAVSNGMPFSLALILS 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +     G+++   + +   +   I+ LI +     +L     +  G        ++   
Sbjct: 69  IVFCSILGVVIDYFAYRPLRNSPRISALITAIGMSFMLESLALVIFGAT-----PKVINT 123

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                 L    +    F+   +   +V++        + L+++ T +  A R +  +  A
Sbjct: 124 NLLPVFLSPKVKINLGFISVSMLTIFVIIVTLICMLVLNLFIKNTKLGKATRAVSQDTGA 183

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +       FA+ S    + G  +A     I P M      +      + GG+ 
Sbjct: 184 AKLMGINVNLTIAITFAIGSGLGALGGVMYAIMYPTIEPYM-GMLPGLKAFIAAVFGGIG 242

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        +L  +     G     + + + F               L L+++ + + L
Sbjct: 243 SIPGAMVGGYVLGIIESYTKGYISSTWANPIVFG-------------VLILILIFKPNGL 289

Query: 340 LR 341
             
Sbjct: 290 FG 291


>gi|237739396|ref|ZP_04569877.1| branched-chain amino acid transport system permease livH
           [Fusobacterium sp. 2_1_31]
 gi|229423004|gb|EEO38051.1| branched-chain amino acid transport system permease livH
           [Fusobacterium sp. 2_1_31]
          Length = 295

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 92/306 (30%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG---SRYGLSIWLL 95
           I +      IY + + G ++V G   L++        IGAY  +      S  GL +W+ 
Sbjct: 7   IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYVSLFSIPTLSSMGLPVWVS 66

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  + +I    G +    + +   +   I+ LI +      L                  
Sbjct: 67  VIPAIIICAIVGCLTERIAYRPLRNSPRISNLITAIGVSLFLENVFMKVFTPNTRSFPKI 126

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                  +             +         ++    LS ++ L++++T    A      
Sbjct: 127 FIQDSIKL----------GDSIQISFGAVVTIVVTVILSIALQLFMKKTKYGKAMIATSQ 176

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   +   +       FA+ S    +A   + ++  +I P M      I      +L
Sbjct: 177 DYAASALVGINVDRTIQLTFAIGSGLAAVAAVLYVSAYPQIQPLM-GSMLGIKAFVAAVL 235

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  L        IL  V  L              F               L +V+L +
Sbjct: 236 GGIGILPGAVIGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIIVLLFK 282

Query: 336 SHSLLR 341
              +L 
Sbjct: 283 PTGILG 288


>gi|161520173|ref|YP_001583600.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
 gi|189353648|ref|YP_001949275.1| branched-chain amino acid transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|221200420|ref|ZP_03573462.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia multivorans CGD2M]
 gi|221206100|ref|ZP_03579114.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia multivorans CGD2]
 gi|221209453|ref|ZP_03582434.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia multivorans CGD1]
 gi|160344223|gb|ABX17308.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
 gi|189337670|dbj|BAG46739.1| branched-chain amino acid transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|221170141|gb|EEE02607.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia multivorans CGD1]
 gi|221174112|gb|EEE06545.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia multivorans CGD2]
 gi|221179761|gb|EEE12166.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Burkholderia multivorans CGD2M]
          Length = 308

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 50/311 (16%), Positives = 101/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G S+V G +G+++      Y IGAY  ++  +           L
Sbjct: 12  LVNGLTLGAIYALIAIGYSMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGVSAGYPLPL 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS +++GA G  +   + +       +  LI +      L  +  I  G    
Sbjct: 72  VLGAALIVSVIVTGAYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +             V        ++     L  ++ L++  + +  A 
Sbjct: 129 ----RDVSVPVLISGAFDIHLGGDFDVTVPYARLLIVGVTIVLMIALTLFISHSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +    + G     +  +++P    F   I   
Sbjct: 185 RACAEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L        G     +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|295696000|ref|YP_003589238.1| inner-membrane translocator [Bacillus tusciae DSM 2912]
 gi|295411602|gb|ADG06094.1| inner-membrane translocator [Bacillus tusciae DSM 2912]
          Length = 321

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 88/306 (28%), Gaps = 9/306 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y   A G ++V G L L++      +  GA+    +      +  L    
Sbjct: 15  LVDGITLGAVYATVALGYTMVYGILELINFAHGEIFMTGAFIGTAVLMGLNAAGVLAAIP 74

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW---KPITNGKAGIYVADR 155
                        + +         +A   + +  + I +               ++A+ 
Sbjct: 75  KGAALLVALAAAMVITGLLGVGIERVAYRPLRKAPRLIPLISAIGVSFVLQDVVRFIAEW 134

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                      +         V  +     VL     + A + L+++RT    A R +  
Sbjct: 135 RTGNYIVTGISLFDSEISFGPVTVKTNALIVLGAAIVMMAGLDLFVQRTKWGTAMRAVAQ 194

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++     ++  +       F V SA  G  G  FA     I P    F   +   +  +L
Sbjct: 195 DKDTAALMSIDVNKVIALTFFVGSALGGATGVLFAQQYGTIDPY-IGFILGLKAFTAAVL 253

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++        +L  +              +L+              + L  V+L +
Sbjct: 254 GGIGNIRGAMFGGFVLGILEMFASAELSVLTGGVLR-----AEYKDVFAFLILIAVLLFK 308

Query: 336 SHSLLR 341
              L  
Sbjct: 309 PEGLFG 314


>gi|144901055|emb|CAM77919.1| Permease of ABC transporter [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 369

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 50/347 (14%), Positives = 108/347 (31%), Gaps = 33/347 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L LL +    LL     A     Y+ ++  + L Y + A  +++V G  G+LSL     +
Sbjct: 22  LFLLVIPGLNLLVPVESALHVPNYMVTLIGKYLCYAILAMAMNLVWGYCGVLSLGHGAFF 81

Query: 75  AIGAYSYVILGS-------------------RYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           A+G Y+  +                                 +         +++ +   
Sbjct: 82  ALGGYAMGMYMMRAIGTRGSYGNAELPDFMVFLNWKELPWFWMGFDNFAFALLMVMVIPG 141

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +  +A           ++            +  +  +     +        F  S
Sbjct: 142 VLAFVFGWLAFRSRINGVYLSIVTQAMTYALMLAFFRNEMGFGGNNGLTDFKDILGFDLS 201

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
               ++ +Y++   +   +  ++ ++  + +      +RD +     L  ++   KL AF
Sbjct: 202 QSSTKLGLYWLTALLLGATFLVVRFIAASKLGRVMMAVRDAESRVRFLGYSVTGVKLFAF 261

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+   G+AGA +      I+P  F  + +I +   V +GG  +L         + G  
Sbjct: 262 TVSAVLAGIAGALYVPQVGIINPSEFSPANSIEIAIWVAVGGRGTLLGPVLGAFAVNGAK 321

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               G              +        +     +V L     L+ L
Sbjct: 322 TWLTG--------------AAPELWLFALGALFIIVTLALPKGLVGL 354


>gi|330809452|ref|YP_004353914.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327377560|gb|AEA68910.1| putative branched-chain amino acid ABC transporter, permease
           component [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 355

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 69/335 (20%), Positives = 131/335 (39%), Gaps = 16/335 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V   L  F+ +    +  +  ++ I  L+  +   GL+++ G  G LSL      A+GA
Sbjct: 29  LVALLLFAFVVVPWLGNDYWFSAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAVGA 88

Query: 79  YSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           ++   +     GL + + I +  + +    ++ GLPSL+ +G YL ++TL         L
Sbjct: 89  FATYNLEVRVAGLPLLVSIALGGLAAALVAVLFGLPSLRIKGFYLLVSTLAAQFFVTWAL 148

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            ++   +N  A   ++                       +      Y + L +      +
Sbjct: 149 TRFSWFSNNSASGVISAPRLE-------------VLGVNLDAPAGRYLLTLSVVVALFWL 195

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRI 256
              L R+ +   W  +RD   A   +   +   KL AFA+S  F+G+AGA +A A    +
Sbjct: 196 GKNLVRSELGRNWMAVRDMDTAAAVIGIALAKTKLLAFAISGFFLGVAGALWAFAYLGTV 255

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
            P  F  + +  ++ I+I+GG+ SL       A ++    L   +       L+      
Sbjct: 256 EPHGFDLNRSFQILFIIIIGGLGSLLGNFLGAAFIVLFPVLLSNLVSLLPGGLVDAGQVE 315

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           N++   +    + L ++     L RL        R
Sbjct: 316 NLQKM-IFGALIILFLIKEPEGLARLWQRFRQRAR 349


>gi|295111648|emb|CBL28398.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           (TC 3.A.1.4.-) [Synergistetes bacterium SGP1]
          Length = 358

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 74/332 (22%), Positives = 130/332 (39%), Gaps = 23/332 (6%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +       +       + +          +  M + +  Y++ A  L++VVG LG LSL
Sbjct: 14  ARRIFATYAVVTAAYGFMQILSATGLLSSTMRGMLVPVCAYMVMAIALNLVVGILGELSL 73

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIW-------LLIPVSAMISGACGMIMGLPSLKFRGDY 121
                 ++GA++ V         I        + + V +  + A G ++G+P L+ +GDY
Sbjct: 74  GHAGFMSVGAFTGVASAIMLQNLIPFAPARLAVAMLVGSGFAAAAGFLIGIPVLRLKGDY 133

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LAI TL   EI +++   +  +     GI  +             +          I +I
Sbjct: 134 LAIVTLAFGEIIKSVFNNF-YLGMDSGGISFSMLSDKTRLLPGGRLIIAGPMGIGGIQKI 192

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             + V   +  ++ +++  L  +    A+  IRD   A  S+   I   K+ AF  S+A 
Sbjct: 193 STFTVGFILVMIALAVMYNLMNSRAGRAFMAIRDVCIAAESVGINITRYKMMAFVTSAAL 252

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G AGA FA +   I  + F F+ +I+V+  V+LGG  ++     A A L  + E     
Sbjct: 253 AGAAGALFAMNYSTIVANKFDFNTSILVLVFVVLGGQGNILGSIVAAAALTILPEKLRQF 312

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
             Y                  L  + L  V+L
Sbjct: 313 ADY---------------RMLLYAVVLIAVML 329


>gi|288960267|ref|YP_003450607.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288912575|dbj|BAI74063.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 339

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 58/321 (18%), Positives = 115/321 (35%), Gaps = 19/321 (5%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
              + +Y+ S+   +L +       ++++G  GLLSL   +   +GAY    L   +G+ 
Sbjct: 31  PFVADRYLLSVLTTVLWFAYVGQAWNVMMGFSGLLSLGHALYVGLGAYVSAALFVHFGIG 90

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            W  + ++ +++ A G ++G    +F    +  A           L+        + G  
Sbjct: 91  PWAGMLLAMLVAVAAGCVIGFLGFRFGVKGVHFA-----------LLTIAFAEVARIGFD 139

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
               +   G     +      P +     +  YYV L +   +  +   L  + +   W 
Sbjct: 140 HITWVGGSGGFFLPVEAGASDPLNLRGSPVLFYYVALALVVGALLLSRALLHSRLGYQWL 199

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVI 270
            +R+   A  +    +  A+++A AVSSA   + G F A   + + P+  F    +I +I
Sbjct: 200 AVREEPDAAEASGVDLFRARMAAVAVSSALTALGGVFQAFYFNNLFPEQVFSMGRSIEII 259

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
              I+GG+ +L        IL  + E    +                         AL  
Sbjct: 260 LPAIVGGIGTLVGPILGAFILTPLGEALTFLIEAG-------GLDLPGLKQLFYGAALVA 312

Query: 331 VILMRSHSLLRLRTPSNFLER 351
           +++ R   +         L R
Sbjct: 313 IVVFRPEGVWPWLARRLRLVR 333


>gi|241663904|ref|YP_002982264.1| inner-membrane translocator [Ralstonia pickettii 12D]
 gi|309781506|ref|ZP_07676242.1| branched-chain amino acid ABC transporter, permease protein
           [Ralstonia sp. 5_7_47FAA]
 gi|240865931|gb|ACS63592.1| inner-membrane translocator [Ralstonia pickettii 12D]
 gi|308919919|gb|EFP65580.1| branched-chain amino acid ABC transporter, permease protein
           [Ralstonia sp. 5_7_47FAA]
          Length = 311

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 98/305 (32%), Gaps = 6/305 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   IY + A G ++V G LG+++        +GA S +   +        L   
Sbjct: 8   IVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMVGAMSALTAINFLQKYFPNLPDW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      +     + +  + +A   L  +     ++         +    +      
Sbjct: 68  LTLVFALLFAMPVCAIVAYTIERVAYRPLRNAPRLAPLITAIGVSIVLQTLAMMIWSRNP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L              S+          ++L    +   +IL + RT +  A R   +NQ+
Sbjct: 128 LTFPQLLPSNPIDIGSTGATITGKEIVIILVSILVMVGLILLVNRTKLGRAMRATAENQR 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +     F   + F + +A   +AG   A +       M  F   +   +  +LGG+
Sbjct: 188 VAGLMGVNPNFVISATFMIGAAMAAVAGVMMATNYGNAHFYM-GFIPGLKAFTAAVLGGI 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  L  G        +       +        I L  V+L R   
Sbjct: 247 GNLAGAMVGGMLLGLIEALGAGYIGDLTGGVFG-----SNYQDVFAFIVLIGVLLFRPSG 301

Query: 339 LLRLR 343
           ++  R
Sbjct: 302 IMGER 306


>gi|283833175|ref|ZP_06352916.1| urea ABC transporter, permease protein UrtC [Citrobacter youngae
           ATCC 29220]
 gi|291070806|gb|EFE08915.1| urea ABC transporter, permease protein UrtC [Citrobacter youngae
           ATCC 29220]
          Length = 357

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 97/331 (29%), Gaps = 27/331 (8%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
            L           +  ++  +IL Y + A  L +V G  G+LSL   I +A+G Y+  + 
Sbjct: 35  ALLPADHPLAISVWTLTLAGKILCYAIVAVALDLVWGYAGMLSLGHGIFFALGGYAMGMY 94

Query: 85  -------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                         S    +                +++ L        +   A     +
Sbjct: 95  LMRQASGEGLPAFMSFLSWTELPWFWWGTQHFIWAMLLVVLVPGLLALVFGWFAFRSKIK 154

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                ++       G    +  +  +              FP +     I ++   + + 
Sbjct: 155 GVYFSIMTQALTFAGMLLFFRNETGFGGNNGFTGFTTILGFPVTATSTRIALFLATVMLL 214

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+  + L L R+        +RD +             KL  + +S+   G+AGA +  
Sbjct: 215 VLALWLGLALARSKFGRILTAVRDAENRLMFCGYDPKGFKLLVWTLSAVLCGLAGALYVP 274

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               I+P     + +I     V LGG  +L        ++ G   L              
Sbjct: 275 QVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVFGAVLVNGAKSL-------------- 320

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           F           + +    V L     ++ L
Sbjct: 321 FTVIMPEYWQLFLGLIFIGVTLFLPRGVIGL 351


>gi|146305735|ref|YP_001186200.1| inner-membrane translocator [Pseudomonas mendocina ymp]
 gi|145573936|gb|ABP83468.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Pseudomonas mendocina ymp]
          Length = 522

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 91/296 (30%), Gaps = 33/296 (11%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL--------SIWLLIPVSAMISGACGMI 109
           I  G LG++++       +GAY+  ++   +               +P++ +++   GM 
Sbjct: 249 ITFGLLGVINMAHGEMLMLGAYTTYVVQLSFQRLAPEYLTLYPLAALPIAFLVTACIGMA 308

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           +    ++          L+ +     ILI+   +T G   + VA+            +  
Sbjct: 309 LERTVIRHLYGRPLET-LLATWGISLILIQLVRVTFGAQNVEVANPA---------WLSG 358

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                  ++       ++    F+ A   L L +T +    R +  N+            
Sbjct: 359 GVQVLPNLVLPYNRIVIIGFALFVVALTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGR 418

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
             + AF + S   G+ G   A S+          S  I    +V+LGG+  L+    A  
Sbjct: 419 VDMLAFGLGSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVLAAF 476

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
            L  V +            +L                        R   L  L+  
Sbjct: 477 GLGVVNKFLEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 519


>gi|330890086|gb|EGH22747.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 355

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 66/328 (20%), Positives = 132/328 (40%), Gaps = 16/328 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +      +  F+ +    +  +  ++ I  L+  +   GL+++ G  G LSL      A+
Sbjct: 27  IGLWSLLVFAFIAVPLLGNDYWFSAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAV 86

Query: 77  GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GA++   +     G+ + L   +  ++S    ++ GLPSL+ +G YL ++TL    + + 
Sbjct: 87  GAFAAYNLQLRVPGMPLLLGFALGGLVSALVALLFGLPSLRIKGFYLLVSTLAAQFVVEW 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L ++   TN  A   +                               Y + LG+  L  
Sbjct: 147 VLTRFSWFTNDNASGVITSPPLI-------------IAGVNFSSPQGRYLLTLGLVVLLF 193

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254
            +   L R  +   W  +RD   A   +   +  AKL AFA+S  ++G+AG+ +A A   
Sbjct: 194 WLARNLLRGELGRNWMAVRDMDTAAAVIGIRLFKAKLLAFAISGFYLGVAGSLWAFAYLG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            + P  F  + +  ++ I+I+GG+  +       A ++    L   ++      L+    
Sbjct: 254 TVEPHGFDLNRSFQILFIIIIGGLGGVQGNFLGAAFIVLFPILLGNLSALLPVGLIDSGQ 313

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
             N++   L    +   ++     L RL
Sbjct: 314 LENIQKM-LFGALIIAFLIKEPEGLARL 340


>gi|297618503|ref|YP_003703662.1| inner-membrane translocator [Syntrophothermus lipocalidus DSM
           12680]
 gi|297146340|gb|ADI03097.1| inner-membrane translocator [Syntrophothermus lipocalidus DSM
           12680]
          Length = 295

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 102/303 (33%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++        +GA+      +  G  ++  + +
Sbjct: 8   LVNGISLGSIYALIALGYTMVYGIINLINFAHGDVMMVGAFIGFFSITALGTGVFPAMVM 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G+++   + K   +   IA LI +      L                   + 
Sbjct: 68  AMACCAVLGVVIEKLAYKPLRNSTRIAALITAIGVSLFLEYGTIWLLTPQQRSFPAGTF- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                    R+F F S+ ++      +VL+    L   +   ++RT I  A R +  NQ+
Sbjct: 127 -------PERYFYFFSNKLVITNRDVFVLVSAVILMLFLQYIVKRTKIGKAMRAVSQNQE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA    AG       + I P M      +      +LGG+
Sbjct: 180 AAMLMGIDVDKTISFTFAIGSALAAAAGVMVGVYYNTIDPLM-GIVPGLKAFVAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        ++  +  L  G     +   + F               L +++L++   
Sbjct: 239 GIIPGAMVGGFLMGVLESLVSGYGSSLYRDAVAF-------------AVLIIILLVKPAG 285

Query: 339 LLR 341
           +  
Sbjct: 286 IFG 288


>gi|167846942|ref|ZP_02472450.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei B7210]
          Length = 391

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 93/347 (26%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 48  IAVGVGVPLAALVAPEASAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 107

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 108 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPA 167

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            Y  +  +          R   F  +
Sbjct: 168 ALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 227

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +          S      +  + +      IRD +     L  + +  KL  +
Sbjct: 228 SPGTRTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 287

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+    +AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 288 VVSAVLCAIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 347

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +                  F       + +   LV L+    ++ L
Sbjct: 348 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 380


>gi|113868229|ref|YP_726718.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
 gi|113527005|emb|CAJ93350.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
          Length = 358

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 119/336 (35%), Gaps = 11/336 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++  L                +M  +I I+V+      +++G  G++S    + +
Sbjct: 14  VLTVILLVILAALACAPFAFPGARALNMAAKICIFVVLVASYDLLLGYTGIVSFAHTMFF 73

Query: 75  AIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
            IG Y   I  SR      ++      +  +S     ++GL SL+ R  + A+ TL ++ 
Sbjct: 74  GIGGYGVAIAMSRMEPGWGALLAGTVGALAVSALLAFLIGLFSLRVRAIFFAMITLAVAT 133

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            F  ++ +    T G+ G+                  +   P S    ++  YY++    
Sbjct: 134 AFATLVSQLSEWTGGEDGLTFKVPEVLRPGFTLGEAEWLGVPLSG---KLLSYYLVFAGA 190

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +   ++L +  +      + IR+N     ++    +  +  +  +S+ F  +AG   A 
Sbjct: 191 VVLFLVLLRIVNSPFGRVLQAIRENDFRAEAIGYRTVVYRTVSTVLSAMFATLAGVLMAI 250

Query: 252 SRDRISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM----NFYYF 306
                 PD    F   + ++ IV++GGM +L      T + +        +    +    
Sbjct: 251 WLRYNGPDTSLSFEIMVDILLIVVIGGMGTLYGAVIGTVLFLVAQTYLQDVMKLASEATA 310

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              L        R    + +   L +      ++  
Sbjct: 311 ALPLLSSLLHPDRWLLWLGLLFILSVYYFPQGVVGR 346


>gi|126451529|ref|YP_001067343.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|242315237|ref|ZP_04814253.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
 gi|254191793|ref|ZP_04898296.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254298938|ref|ZP_04966388.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|126225171|gb|ABN88711.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|157809237|gb|EDO86407.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|157939464|gb|EDO95134.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|242138476|gb|EES24878.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
          Length = 400

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 93/347 (26%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 57  IAVGVGVPLAALVAPEASAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 116

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 117 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPA 176

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            Y  +  +          R   F  +
Sbjct: 177 ALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 236

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +          S      +  + +      IRD +     L  + +  KL  +
Sbjct: 237 SPGTRTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 296

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+    +AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 297 VVSAVLCAIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 356

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +                  F       + +   LV L+    ++ L
Sbjct: 357 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 389


>gi|107103959|ref|ZP_01367877.1| hypothetical protein PaerPA_01005031 [Pseudomonas aeruginosa PACS2]
          Length = 359

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 52/304 (17%), Positives = 90/304 (29%), Gaps = 13/304 (4%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS- 86
               A     Y  ++  +IL YV+ A  L +V G  GLLSL   + +A+G Y+  +    
Sbjct: 39  PADSALHLSAYSLTLTGKILCYVIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMR 98

Query: 87  ---------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
                          W  +P     +      + L  L       A          + + 
Sbjct: 99  QASGDSLPAFMTFLSWNELPWYWAGTQHFLWALCLVVLVPGALAFAFGYFAFRSRIRGVY 158

Query: 138 IKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                     AG+ +  R    +              FP +       ++   + +   S
Sbjct: 159 FSIMTQALTFAGMLLFFRNETGFGGNNGFTDFRSILGFPITAPGTRAALFLATVALLAAS 218

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L R+        +RD +             KL  + +S+   G+AGA F     
Sbjct: 219 LLLGWRLARSKFGRVLTALRDAENRLMFCGYDPRGYKLFVWTLSAVLCGLAGALFVPQVG 278

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            I+P     + +I     V LGG  +L        ++ G           Y+   L    
Sbjct: 279 IINPSEMSPTNSIEAAVWVALGGRGTLLGPLLGAGVVNGAKSWFTVAFPEYWLFFLGALF 338

Query: 315 SFNM 318
               
Sbjct: 339 IVVT 342


>gi|227511441|ref|ZP_03941490.1| branched-chain amino acid ABC transporter, permease protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227523643|ref|ZP_03953692.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Lactobacillus hilgardii
           ATCC 8290]
 gi|227085392|gb|EEI20704.1| branched-chain amino acid ABC transporter, permease protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227089215|gb|EEI24527.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Lactobacillus hilgardii
           ATCC 8290]
          Length = 299

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 103/303 (33%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A G ++V G + L++      Y +GA+    + + +  +    +  
Sbjct: 15  IINGLSLGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFWGYYVINVWHFNFISALLS 74

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G+I+   + +       IA LI +     +L                     
Sbjct: 75  AMVVGAVSGVIIEYFAYRPLRHSPRIAALITAIGVSFLLENGMSYLFSSN---------- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I+   +    V+       +L+  C L   + + +++T +  A R +  +  
Sbjct: 125 -TRDFPQIIKQVNYNIGGVLISNIQVLILVTACILMILLQVIIKKTKMGRAMRAVSVDPD 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   I +     FA+ SA  G AG       + I P M   +  I      +LGG+
Sbjct: 184 AAELVGININWTISFTFALGSALAGAAGVLIGLYYNSIDPLM-GMTPGIKAFVAAVLGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   +    ++  +      +               +     ++   L +++L+    
Sbjct: 243 GSVPGASVGGFLIGILETFFQSIG-------------LSAYKDAVVYFVLIVILLIMPAG 289

Query: 339 LLR 341
           +  
Sbjct: 290 IFG 292


>gi|317401548|gb|EFV82177.1| inner-membrane translocator [Achromobacter xylosoxidans C54]
          Length = 355

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 127/358 (35%), Gaps = 11/358 (3%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M I  L  +     L  + +V  +L               ++  +IL++V+      +++
Sbjct: 1   MPIRLLSGDPPRSTLLAVMLVAIVLTLAAAPFLFPGPKSLAVAAKILVFVILVASYDLLL 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP---VSAMISGACGMIMGLPSLKF 117
           G  G++S    + + IGAY   I   R       ++        +S    +I+GL SL+ 
Sbjct: 61  GYTGIVSFAHTMFFGIGAYGVAIASVRMEAGWLAVLTGTAAGLAVSLVFALIIGLASLRV 120

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           R  + A+ TL ++  FQ ++ +   +T G+ G+                   F       
Sbjct: 121 RAIFYAMITLAVAAAFQTLVSQLSDLTGGEDGLNFKVPQALRPAFRPLSEPLFGVTVDG- 179

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
              I  YY++   C +   ++L +  +      + IR+N     ++    +  +  +  +
Sbjct: 180 --RIITYYLIAAACVVLFLMLLRIVNSPFGRVLQAIRENPFRAEAIGYRTVLYRSLSNLL 237

Query: 238 SSAFIGMAGAFFAASRDRISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           ++AF  +AGA +A       PD    F   + ++ +V++GGM ++       ++ +    
Sbjct: 238 AAAFATLAGALYALWLRYNGPDTSLSFEIMLNILLMVVIGGMGTMYGAVIGASLFVFAQS 297

Query: 297 LCCG----MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                   ++    +           R    + I   L +      +           
Sbjct: 298 YLQDGLHVIHDAVGSIAPLALLFEPDRWLLWLGILFVLSVYYFPTGVAGRLREVARRR 355


>gi|83595056|ref|YP_428808.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
 gi|83577970|gb|ABC24521.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
          Length = 334

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 60/340 (17%), Positives = 122/340 (35%), Gaps = 9/340 (2%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            +++ +L     L L  +        Y   + I   I V+    + +  G  G+ SL  V
Sbjct: 3   RRLVLMLGGACLLALAGWGLPMVVSDYGQRLLIMGCISVILVASMGLANGFTGVFSLGQV 62

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
              AIGAY   IL          L  + A ++G          +      L    +    
Sbjct: 63  GFVAIGAYVSGILSLSVADKAAYLPDLPAFLAG--------VQMGTVPATLLAGAVCAGV 114

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                L   +   +  +   +   +      V +        +   +       V L   
Sbjct: 115 AVIVGLPLMRLSGHHVSVATMGFMIIVNSVIVNAESFTRGARTFTGVPTDITLPVALIWM 174

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            ++ +++  L  + I  A R++R++  A  ++  +++  +L AF V + F G+ G+ +  
Sbjct: 175 VITLALLGRLIYSPIGLALRSVREDTIAAQAVGLSVLKTRLLAFTVGAFFAGVGGSLYGH 234

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                S   F F   + +I +++LGGM SLS       ++  + E+   +        + 
Sbjct: 235 YLGSFSAQTFFFPLMVSLIIMLVLGGMGSLSGAVVGVVVVTALSEILRNLERGMDLGFVV 294

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               F      ++ +   LV++ R   LL  R  ++F  +
Sbjct: 295 VPPLFGASQ-VVLGLLFILVMIYRPRGLLEDRELTSFGRK 333


>gi|329940865|ref|ZP_08290145.1| branched chain amino acid transport permease [Streptomyces
           griseoaurantiacus M045]
 gi|329300159|gb|EGG44057.1| branched chain amino acid transport permease [Streptomyces
           griseoaurantiacus M045]
          Length = 309

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 96/307 (31%), Gaps = 12/307 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY--SYVILGSRYGLSIWLLI 96
           + +      +Y + A G ++V G + L++      +  G +    V +      S+WL +
Sbjct: 8   LANGLFLGSMYGLIAIGYTMVYGIVQLINFAHGEIFMTGGFGALSVYIWLPGNTSMWLAL 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P+         +++ + + +F    L  A  +        LI    ++            
Sbjct: 68  PLMLAGGAVVAVLVAVGAERFAYRPLRGAPRLAP------LITAIGLSLALQQAVFNWYP 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 V   + F  +    V  +    ++++       ++  ++R +    A +    +
Sbjct: 122 DAKTDRVFPQLPFGPYHIGSVRIQSGDIFLVVAAILCMTALAFFVRLSRTGRAMQATAQD 181

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 +        + AFA+   F  +AG  +      +      F   +   +  +LG
Sbjct: 182 PDTAQLMGIDTNRIIVIAFAIGGLFAAVAGVAYGLKYGSV-KYDMGFQAGLKAFTAAVLG 240

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++        +L     +                  +      +++I + L    R 
Sbjct: 241 GIGNIYGAMLGGLVLGVAEAMATAYIADIPGMEQLGGQGWASVWAFVLLILVLL---FRP 297

Query: 337 HSLLRLR 343
             LL  R
Sbjct: 298 QGLLGER 304


>gi|170025096|ref|YP_001721601.1| urea ABC transporter permease UrtB [Yersinia pseudotuberculosis
           YPIII]
 gi|169751630|gb|ACA69148.1| urea ABC transporter, permease protein UrtB [Yersinia
           pseudotuberculosis YPIII]
          Length = 533

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 82/288 (28%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++ S +       + +  +I+      +       
Sbjct: 260 ITYGLLGVINMAHGEMLMLGAYSAYLVQSLFQQFAPHWLALYPLIALPVAFFITAGIGMA 319

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W        G+ +      L     + +         +
Sbjct: 320 LER--TVIRHLYGRPLETLLATWGISLMLIQGVRMLFGPQNLEVANPAWLSGGVQVLPNL 377

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+  +  +     L L +T +    R +  N+              + AF +
Sbjct: 378 VLPWNRIAVIAFVIIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGRVDMLAFGL 437

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+             I    +V+LGG+  L+    A   L  + ++
Sbjct: 438 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 495

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 496 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 530


>gi|86748785|ref|YP_485281.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86571813|gb|ABD06370.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 637

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 56/310 (18%), Positives = 119/310 (38%), Gaps = 33/310 (10%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
              +  Y+ S+G +IL++V+FA  L  ++   GL S      + +GAY         G  
Sbjct: 325 PLVAGNYLLSVGAEILVFVLFAASLHFMMTVGGLASFGHAAFFGLGAYGAAFAVKFLGAP 384

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + + + V  +      ++ G   ++  G Y A+ TL  ++I  +I  +W  +T G  GI 
Sbjct: 385 MEVALLVGPLFGLLGAVVSGWFCVRLSGVYFAMLTLAFAQIIWSIAFQWVEVTGGDNGIL 444

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                               +PS++       +++ LG+     +++  L  +      R
Sbjct: 445 GI------------------WPSAWASTPQGFFWLTLGVVVAGVALLRMLVFSPFGFGLR 486

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
             RDN     ++       + +A  V+  F G+AGA FA  +  + P+      ++  + 
Sbjct: 487 ATRDNTLRSEAIGIDRKSVQWAALIVAGTFAGVAGALFAFLKGSVFPESLAIPISVDGLV 546

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +V+LGG+ ++S       +   +                    S       ++   + L+
Sbjct: 547 MVLLGGIETVSGAVVGAIVYKALAIWL---------------MSQTDLSKLVLGAIIVLL 591

Query: 332 ILMRSHSLLR 341
           ++     ++ 
Sbjct: 592 VVAAPKGIVG 601



 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 93/308 (30%), Gaps = 28/308 (9%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS--IWLLIP 97
            S         + A GLSI+ G   +++      Y +GAY    L  R+      W  + 
Sbjct: 9   LSGLASAASLFLVASGLSIIFGVTRIVNFAHGAFYMLGAYVAFTLTDRFSGPLGFWGGLL 68

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            +++I    G +M +  L+       +  L+ +     ++     +  G   +       
Sbjct: 69  AASLIVAVLGALMEMVLLRRIYHAPELFQLLATFGVTLMVQDIVVLIWGADDLMGPRAPG 128

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
           F G           F     +   +   +++    +  ++ L   RT      R    ++
Sbjct: 129 FAGA----------FSLFGRLVPTYDILLIVLGPVVLGALWLLFHRTRWGVLVRAATQDR 178

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                L     +   S FA+      + GA                   + V+ ++    
Sbjct: 179 DMVACLGVNQKWLFTSVFALGCFLAALGGALQIPRTTVTHYMDLSIIVEVFVVVVIGG-- 236

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S++    A  ++  +  L                          + + + +V+++R +
Sbjct: 237 LGSVTGAFIAAVLVSELNALGI--------------LVLPKISLIAVFLVMAVVLVVRPY 282

Query: 338 SLLRLRTP 345
            LL     
Sbjct: 283 GLLGKAER 290


>gi|70734142|ref|YP_257782.1| ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68348441|gb|AAY96047.1| probable permease of ABC transporter PA4859 [Pseudomonas
           fluorescens Pf-5]
          Length = 538

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/295 (14%), Positives = 85/295 (28%), Gaps = 31/295 (10%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK- 116
           I  G LG++++       +GAY+  ++   +       I    +++      +       
Sbjct: 265 ITFGLLGVINMAHGEMLMLGAYATYVVQLLFQRYAPQAIEYYPLLALPVAFFVTAGIGMA 324

Query: 117 -----FRGDYLAIA-TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                 R  Y     TL+ +     +LI+   +  G   + VA+            +   
Sbjct: 325 LERTVIRHLYGRPLETLLATWGISLMLIQLVRLLFGAQNVEVANPA---------WLSGG 375

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                 ++       ++    F+     L L +T +    R +  N+             
Sbjct: 376 IQVLPNLVLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRV 435

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
            + AF + S   G+ G   A S+          S  I    +V+LGG+  L+    A   
Sbjct: 436 DMLAFGLGSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVLAAFG 493

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           L    ++           +L                        R   L  L+  
Sbjct: 494 LGVANKILEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 535


>gi|319794640|ref|YP_004156280.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315597103|gb|ADU38169.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 328

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 54/302 (17%), Positives = 126/302 (41%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             ++++ + +FA   ++++G  GLLS          AY        +GL+  L +    +
Sbjct: 30  FVMKLMCFALFAAAFNLLLGFTGLLSFGHAAFLGGSAYVAGHAIKVWGLTPELGLIAGTL 89

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
                G I G+ +++ +G Y A+ TL ++++   + ++    T G+ G+    R      
Sbjct: 90  SGAFLGWIFGILAIRRQGIYFAMITLALAQMMFFVALQA-KFTGGEDGLQGVPR------ 142

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F    +  ++ MYYV L +  L+  +I+    +      + I++N+    
Sbjct: 143 -------GKLFGVIDLSNDLTMYYVALVVVVLAFLLIVRTIHSPFGQVLKGIKENEPRAL 195

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   KL AF +S+A  G+AG+         +     ++ +  VI + ++GG+ +L
Sbjct: 196 SLGYDVSRFKLLAFVISAALSGLAGSLKTLVLGFATLSDVHWTASGQVILMTLVGGLGTL 255

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           S     +A+++ +      +  +    + + +  +     T +  +   + +L     ++
Sbjct: 256 SGPIVGSAVVVLLENKIGELGNFLARITTVDWFNTLGESVTMVTGLIFVICVLAFRKGIM 315

Query: 341 RL 342
             
Sbjct: 316 GE 317


>gi|134280092|ref|ZP_01766803.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|134248099|gb|EBA48182.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
          Length = 400

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/347 (13%), Positives = 93/347 (26%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 57  IAVGVGVPLAALVAPEASAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 116

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 117 FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPA 176

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            Y  +  +          R   F  +
Sbjct: 177 ALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 236

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +          S      +  + +      IRD +     L  + +  KL  +
Sbjct: 237 SPGTRTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 296

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+    +AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 297 VVSAVLCAIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 356

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +                  F       + +   LV LM    ++ L
Sbjct: 357 SVFTAY--------------FAEYWLFFLGLIFVLVPLMLPRGIMGL 389


>gi|51595573|ref|YP_069764.1| ABC type branched-chain amino acid transporter, permease protein
           [Yersinia pseudotuberculosis IP 32953]
 gi|108806897|ref|YP_650813.1| branched chain amino acid ABC transporter permease [Yersinia pestis
           Antiqua]
 gi|108812948|ref|YP_648715.1| branched chain amino acid ABC transporter permease [Yersinia pestis
           Nepal516]
 gi|145599776|ref|YP_001163852.1| branched chain amino acid ABC transporter permease [Yersinia pestis
           Pestoides F]
 gi|149366817|ref|ZP_01888851.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis CA88-4125]
 gi|165924454|ref|ZP_02220286.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938409|ref|ZP_02226967.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166009848|ref|ZP_02230746.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166211463|ref|ZP_02237498.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167400176|ref|ZP_02305689.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167419528|ref|ZP_02311281.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167424270|ref|ZP_02316023.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167466735|ref|ZP_02331439.1| Branched-chain amino acid transport system, permease component
           [Yersinia pestis FV-1]
 gi|186894637|ref|YP_001871749.1| urea ABC transporter permease UrtB [Yersinia pseudotuberculosis
           PB1/+]
 gi|218928351|ref|YP_002346226.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis CO92]
 gi|229841132|ref|ZP_04461291.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229843236|ref|ZP_04463382.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229894146|ref|ZP_04509332.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis Pestoides A]
 gi|229903380|ref|ZP_04518493.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis Nepal516]
 gi|270487191|ref|ZP_06204265.1| urea ABC transporter, permease protein UrtB [Yersinia pestis KIM
           D27]
 gi|294503205|ref|YP_003567267.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis Z176003]
 gi|51588855|emb|CAH20469.1| ABC type branched-chain amino acid transporter, permease protein
           [Yersinia pseudotuberculosis IP 32953]
 gi|108776596|gb|ABG19115.1| Branched-chain amino acid transport system, permease component
           [Yersinia pestis Nepal516]
 gi|108778810|gb|ABG12868.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis Antiqua]
 gi|115346962|emb|CAL19852.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis CO92]
 gi|145211472|gb|ABP40879.1| Branched-chain amino acid transport system, permease component
           [Yersinia pestis Pestoides F]
 gi|149291191|gb|EDM41266.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis CA88-4125]
 gi|165913787|gb|EDR32406.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165923514|gb|EDR40646.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991244|gb|EDR43545.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166207234|gb|EDR51714.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166962269|gb|EDR58290.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050125|gb|EDR61533.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167057119|gb|EDR66882.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|186697663|gb|ACC88292.1| urea ABC transporter, permease protein UrtB [Yersinia
           pseudotuberculosis PB1/+]
 gi|229679150|gb|EEO75253.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis Nepal516]
 gi|229689583|gb|EEO81644.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229697498|gb|EEO87545.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229704031|gb|EEO91044.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis Pestoides A]
 gi|262361244|gb|ACY57965.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis D106004]
 gi|262365219|gb|ACY61776.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis D182038]
 gi|270335695|gb|EFA46472.1| urea ABC transporter, permease protein UrtB [Yersinia pestis KIM
           D27]
 gi|294353664|gb|ADE64005.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis Z176003]
 gi|320015972|gb|ADV99543.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis biovar Medievalis str. Harbin
           35]
          Length = 533

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 81/288 (28%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++ S +       + +  +I+      +       
Sbjct: 260 ITYGLLGVINMAHGEMLMLGAYSAYLVQSLFQQFAPHWLALYPLIALPVAFFITAGIGMA 319

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W        GI +      L     + +         +
Sbjct: 320 LER--TVIRHLYGRPLETLLATWGISLMLIQGIRMLFGPQNLEVANPAWLSGGVQVLPNL 377

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+  +  +     L L +T +    R +  N+              + AF +
Sbjct: 378 VLPWNRIAVIAFVIIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGRVDMLAFGL 437

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+LGG+  L+    A   L  + ++
Sbjct: 438 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 495

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 496 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 530


>gi|167825453|ref|ZP_02456924.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 9]
          Length = 362

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 93/347 (26%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 19  IAVGVGVPLAALVAPEASAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 78

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 79  FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPA 138

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            Y  +  +          R   F  +
Sbjct: 139 ALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 198

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +          S      +  + +      IRD +     L  + +  KL  +
Sbjct: 199 SPGTRTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 258

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+    +AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 259 VVSAVLCAIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 318

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +                  F       + +   LV L+    ++ L
Sbjct: 319 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 351


>gi|313898239|ref|ZP_07831777.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Clostridium sp. HGF2]
 gi|312957003|gb|EFR38633.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Clostridium sp. HGF2]
          Length = 292

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 91/289 (31%), Gaps = 12/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GAY   I  ++  L  +  + +
Sbjct: 8   LVNGLSIGSIYALIALGYTMVYGIIKLINFAHGDIYMLGAYVGFISIAQLHLGFFPALLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  G+I+   + K   +   IA LI +      L        G         L  
Sbjct: 68  AMVVCGVLGVIIERIAYKPLRNATRIAALITAIGVSYFLEYSTQKIMGPGVKTYPSVLSN 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V  +    +      I  I              ++   +R+T I  + R +  +  
Sbjct: 128 QTFHVFGIQIQMQQIYILAITIIL-----------MLALQFIVRKTKIGRSMRAVSVDAD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G  G       + I+P M      I      + GG+
Sbjct: 177 AAKLMGINVDATISYTFAIGSALAGAGGVLVGMYYNTINPLM-GMVPGIKAFVAAVFGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +         +  V  L        +   + +     +       + 
Sbjct: 236 GIIPGAMFGGFFIGIVEALVTAYGSSLYKDAVVYAILILILIIKPAGLL 284


>gi|297161384|gb|ADI11096.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces bingchenggensis BCW-1]
          Length = 310

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 97/308 (31%), Gaps = 7/308 (2%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            + + +      +Y + A G ++V G + L++      + IG +  + +         L 
Sbjct: 5   PQTLVNGLTLGALYGLIAIGYTMVYGIVQLINFAHGEIFMIGGFGALTIYLWLPSGTALS 64

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + +  MI G     + + +   R  Y     L        ++         +  ++    
Sbjct: 65  LALPLMIIGGIVASVAIATAAERFAY---RPLRGGPRLAPLITAIGLSIALQQAVWAFYP 121

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                 +            S +  +    ++L+       ++ L++ ++    A +    
Sbjct: 122 DAKKSRSFPQFEGKSLEIFSNLHIQRGDVFLLIAAPLCMLALGLFVSKSRAGRAMQATAQ 181

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +      +        + AFA+  AF  +A         +++ +M  F   +   +  +L
Sbjct: 182 DPDTAKLMGINTDRIIVMAFAIGGAFAAVAAVAHGLKYGQVNFEM-GFIAGLKAFTAAVL 240

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++        +L     L      Y  +                    L +V+L+R
Sbjct: 241 GGIGNIYGAMLGGVVLGIAEALA---IKYIQDIPGMEQLGGGTWKDVWAFTLLIVVLLVR 297

Query: 336 SHSLLRLR 343
              LL  R
Sbjct: 298 PQGLLGER 305


>gi|209886608|ref|YP_002290465.1| abc-type transporter, permease component: haat family [Oligotropha
           carboxidovorans OM5]
 gi|209874804|gb|ACI94600.1| abc-type transporter, permease component: haat family [Oligotropha
           carboxidovorans OM5]
          Length = 382

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 68/325 (20%), Positives = 135/325 (41%), Gaps = 21/325 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +    P+ +     A     +   M   +LIY +   GL+I  G  G+++      + +G
Sbjct: 68  VVWTIPVAVVAIAVAIHEDHFQLMMLASVLIYGLACIGLTIQFGYAGVINFAGAAFFGVG 127

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  ++GS    S+ +L+     ++   G I+ LP L+ +G Y A+ T+    +F++ L
Sbjct: 128 GYTAAVMGSTGVPSLLILLA-GGFMAALIGSIIILPVLRTQGHYAALITIAFGLLFRSFL 186

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                +     G     ++        SL+    F S    + +    + L    L   +
Sbjct: 187 EVNPAL-----GGPQGLKVEGASVAGHSLLNGITFGSFEASFYLNYVLLALAAFTLFFLL 241

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L ++ I      +R++          +   ++ AF V +  IG+AGA FA  ++ I+
Sbjct: 242 ARNLEKSWIGLNLDAVREDTVGASVFGINVAGWRIFAFVVGNFLIGVAGALFAMMQNFIA 301

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F FS++++++SI++LGG+ +L  +  A  +++   E   G+  Y             
Sbjct: 302 PSNFTFSDSLLMLSIIVLGGIGNLWAVLPAAILVVVFPEKLQGIGEY------------- 348

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                +  I + LV+  R   L   
Sbjct: 349 --RILVFAILVVLVLRFRPAGLFPR 371


>gi|302550718|ref|ZP_07303060.1| urea ABC transporter, permease UrtB [Streptomyces viridochromogenes
           DSM 40736]
 gi|302468336|gb|EFL31429.1| urea ABC transporter, permease UrtB [Streptomyces viridochromogenes
           DSM 40736]
          Length = 309

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A G ++V G + L++      +  GA+            I      
Sbjct: 8   LANGLLLGSMYGLIAIGYTMVYGIVQLINFAHGEIFMTGAF----GALTVYFYILPDGTS 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+      +   L ++         A   +    +   +      +      V +    
Sbjct: 64  MAIAVPLMLIGGALVAILIAVGAERFAYRPLRGAPRLAPLITAIGLSLALQEVVRNFYPG 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +  +    +++L      A++ +++RR+    A +    +  
Sbjct: 124 ADRARAFPGLDATHDIGSITIKDADIFLILAAVVCMAALAIFVRRSRTGRAMQATAQDPD 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        + AFA+   F  +A   +      +   M  F   +   +  +LGG+
Sbjct: 184 TAQLMGIDTNRIIVIAFAIGGFFAAVAAVAYGLKYGNVDYRM-GFLMGLKAFTAAVLGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L     L                 S+           L LV+L R   
Sbjct: 243 GNIYGAMLGGVVLGIAETLASAYIDEIPGMNQLGGQSWANVWA---FCLLILVLLFRPQG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|254467514|ref|ZP_05080924.1| inner-membrane translocator [Rhodobacterales bacterium Y4I]
 gi|206684515|gb|EDZ44998.1| inner-membrane translocator [Rhodobacterales bacterium Y4I]
          Length = 329

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 62/311 (19%), Positives = 114/311 (36%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A++  LL+      +  + +I ++  +  I  +   GL+I +G  GL+SL     + IG 
Sbjct: 12  AMIAALLIVPLAAWSLDEPFIITLATKAAILALAGVGLNIALGLGGLISLGHAAFFGIGG 71

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL +       L              ++ L ++ F      +   +         I
Sbjct: 72  YAMGILAAHAQNYEPLFEWPFLFEGSNQMPLIWLVAVVFSALAALVIGALSLRTSGVYFI 131

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                       +      + G    S+     FP    +  I  + +   +  L+    
Sbjct: 132 MITLAFGQMLYYFAISWSAYGGEDGLSIWVRNEFPGLNTLDPIQFFAIAYVILCLALYFA 191

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+    A    R N+    ++  T    +L+AF +S A  G+AGA FA     +SP
Sbjct: 192 ARLARSPFGLALAAARQNEDRVQAVGLTPFTLRLTAFVISGAITGLAGALFADLNRFVSP 251

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            M  +  +  ++  VILGG+  L       A+ I +  L  G++ Y+   L        +
Sbjct: 252 TMLSWHNSGEIMIFVILGGVGRLYGPVAGAALYIILEHLLGGISDYWQIFLGVLLLLIVL 311

Query: 319 RHTTLMVIALF 329
                ++ AL 
Sbjct: 312 FARGGLIGALA 322


>gi|78779211|ref|YP_397323.1| putative membrane protein of urea ABC transport system
           [Prochlorococcus marinus str. MIT 9312]
 gi|78712710|gb|ABB49887.1| urea ABC transporter membrane protein [Prochlorococcus marinus str.
           MIT 9312]
          Length = 376

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/358 (13%), Positives = 106/358 (29%), Gaps = 35/358 (9%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           MS+  ++ +K      +L+    L+  +    T    +  ++  + L   + A G+ ++ 
Sbjct: 1   MSLSKIKFDKK----IVLSFWIILIALIIAAPTLLPVFRLNLLGRYLSLSIVALGVDLIW 56

Query: 61  GSLGLLSLNCVIAYAIGAYSYVIL-----------------GSRYGLSIWLLIPVSAMIS 103
           G  GLLSL   I +A+G Y   +                         +           
Sbjct: 57  GYTGLLSLGQGIFFALGGYCAAMYLQITSSSEFPNNIPEFFALYGVEKLPFFWEPFRSPV 116

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
                I  +P+L        +    +  ++ +IL +   +            +       
Sbjct: 117 FTFFAIWIIPALVAGLIGFLVFRNRIKGVYFSILTQASLLVFFNFFNGQQKLINGTNGLK 176

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
             + + F         +   +++   +   S     W+ +    N    IRD++      
Sbjct: 177 TDVTQLFGQMVGSESIQRLFFWLTAILVIASWFFAKWVVKGRFGNILIGIRDDEPRVRFT 236

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
               +  K   F+++    G++GA +      +SP       +I ++  V +GG  +L  
Sbjct: 237 GYNPVIFKTIIFSIAGGLAGISGALYTVQSGIVSPQFMTVPFSIEMVIWVAVGGRGTLLG 296

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  +     L                 +       +      LV+      +L 
Sbjct: 297 AILGAVFINYAKSLVSE--------------ALPASWMFIQGGLFILVVTALPEGVLG 340


>gi|291616195|ref|YP_003518937.1| LivM [Pantoea ananatis LMG 20103]
 gi|291151225|gb|ADD75809.1| LivM [Pantoea ananatis LMG 20103]
 gi|327396434|dbj|BAK13856.1| high-affinity branched-chain amino acid transport system permease
           protein LivM [Pantoea ananatis AJ13355]
          Length = 358

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 58/345 (16%), Positives = 105/345 (30%), Gaps = 27/345 (7%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +  +L ++  L L           Y  ++  +IL Y + A  L +V G  GLLSL   + 
Sbjct: 24  VTLMLLIMPFLALLPATHPLAISTYTLTLVGKILCYAVVAVALDLVWGYAGLLSLGHGLF 83

Query: 74  YAIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           +A+G Y+  +                   W  +P     +      + L  L      L 
Sbjct: 84  FALGGYAMGMYLMRQAAGDGVPAFMAFLSWDRLPWFWAGTQHFAWALCLIVLVPGLLALV 143

Query: 124 IATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
                     +     ++       G    +  +  +              F  +     
Sbjct: 144 FGFFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFNVTATGTR 203

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           I ++   + +  +S  +   L R+        +RD +             KL  + +S+ 
Sbjct: 204 IGLFVATVILLLVSLGLGFVLARSKFGRVLTAVRDAENRLMFCGYDPRGFKLFVWTLSAV 263

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             GMAGA +      I+P     + +I     V LGG  +L       AI+ G   L   
Sbjct: 264 LCGMAGALYVPQVGIINPGEMSPTNSIEAAIWVALGGRGTLIGPLLGAAIVNGAKSL--- 320

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      F  +F       + +   LV L     ++ L   
Sbjct: 321 -----------FTVAFPEYWLFFLGMMFILVTLFLPRGVIGLLRR 354


>gi|317054150|ref|YP_004118175.1| inner-membrane translocator [Pantoea sp. At-9b]
 gi|316952145|gb|ADU71619.1| inner-membrane translocator [Pantoea sp. At-9b]
          Length = 344

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 56/335 (16%), Positives = 117/335 (34%), Gaps = 17/335 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++ V   ++L  F  +   + Y        L+  + +  L+ + G  G+L       + +
Sbjct: 11  IIGVALVVMLVAFWLSGALELYTLLSVTVFLVMGLLSLSLAFIWGYGGILCFGQAAFFGL 70

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+Y I    +G S W ++    + +    ++  +           +    ++     +
Sbjct: 71  GAYTYAICAINWGDSTWAVVMAVLLPTLFSLLLGYVIFYG---GVSDVYLGAITLAVSLV 127

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           L  W   T G         L               F    ++    ++ V  G   L   
Sbjct: 128 LFNWVNSTAGSEYHIGQALLGGFNGIPSVPTLNLPFQPDAILAPEAIFLVTAGCLALCYV 187

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++ +   +        IR+N++    L   +   KL+ FA+ +A  G+AG  +      +
Sbjct: 188 LLKFTLLSRFGKTVVAIRENEQRAGLLGYNVPAHKLATFAIGAAIAGLAGCLYVNWGAFV 247

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP +F  S++  +I  VI+GG  +L     +  +L  +V           N         
Sbjct: 248 SPGVFSISQSAQIIIWVIVGGRGTLIGPVISCILLQWMVTRLGAQQTVDVN--------- 298

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 ++ + L + +L+    LL         +R
Sbjct: 299 -----LVLGVILAVFVLLIPGGLLPTLQRVWRRKR 328


>gi|170723819|ref|YP_001751507.1| inner-membrane translocator [Pseudomonas putida W619]
 gi|169761822|gb|ACA75138.1| inner-membrane translocator [Pseudomonas putida W619]
          Length = 304

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 86/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P+
Sbjct: 9   LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIESFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+          + FV       ++L+        +   ++ T +    R  + ++K
Sbjct: 129 GVPTLLEGAWRVEVGTGFVQLTYTKIFILIAAFVGMGLLTYVIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +    +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL     L  G+    +  +  F               L L+++ R   
Sbjct: 248 GSLPGAMLGGIILGISESLFSGLINSDYKDVFSFS-------------LLVLILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|134300766|ref|YP_001114262.1| inner-membrane translocator [Desulfotomaculum reducens MI-1]
 gi|134053466|gb|ABO51437.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Desulfotomaculum reducens MI-1]
          Length = 297

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 93/306 (30%), Gaps = 22/306 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           + + +      +Y + A G ++V G L L++        + AY        + L  WL  
Sbjct: 8   QNLANGISLGSLYALIAIGYTMVYGILRLINFAHADLLMVAAYVSFYGIMVFALPWWLSF 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ + +   G+ +   + +       I+ LI +     +L     +  G          
Sbjct: 68  LIAIVFTALLGVSIEKIAYRPLRSAPRISVLISAIGVSFLLENLGIVAIGARPKSFPRP- 126

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                        +      V +      + +    L  ++   + +T    A R +  +
Sbjct: 127 ---------EEMVWNIKIGDVSFLSLTVIIPVVTMVLLVAVTYMVNKTKTGTAMRAVSRD 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    +   +     + F V S+   + G  ++    +I P M      +      ++G
Sbjct: 178 FETASLMAIDVNKVVSTTFVVGSSLAAVGGIMWSLQYPQIDPLM-GVFPGLKCFIAAVMG 236

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        IL                  + F    +        + L  ++L + 
Sbjct: 237 GIGSIPGAMLGGFILGMGEVFL-----------VAFMPELSGYRDAFAFVILIFILLFKP 285

Query: 337 HSLLRL 342
             +L  
Sbjct: 286 TGILGE 291


>gi|308185586|ref|YP_003929717.1| ABC transport system, permease protein [Pantoea vagans C9-1]
 gi|308056096|gb|ADO08268.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 357

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 59/347 (17%), Positives = 101/347 (29%), Gaps = 27/347 (7%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             I   L V+  L L           Y  ++  +IL Y + A  L +V G  GLLSL   
Sbjct: 22  LAITLALLVMPFLALLPATHPLAISTYTLTLVGKILCYAVVAVALDLVWGYAGLLSLGHG 81

Query: 72  IAYAIGAYSYVIL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           + +A+G Y+  +               S                      +  L      
Sbjct: 82  LFFALGGYAMGMYLMRQAAGEGLPAFMSFLSWRELPWFWTGTEYFAWALCLSMLVPGLLA 141

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
             +   A     +     ++       G    +  +  +              F  +   
Sbjct: 142 LVFGFFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFLVTATG 201

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
             I ++   + +  LS  I   L R+        +RD +             KL  + +S
Sbjct: 202 TRIGLFIATVLLLLLSLVIGFALARSKFGRVLTAVRDAENRLMFCGYDPRGFKLFVWTLS 261

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           +   G+AGA +      I+P     + +I     V LGG  +L       AI+ G     
Sbjct: 262 AVLCGLAGALYVPQVGIINPGEMSPANSIEAAIWVALGGRGTLIGPLLGAAIVNGARSF- 320

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                        F  +F       + +   LV L   H ++ L   
Sbjct: 321 -------------FTVAFPEYWLFFLGLMFILVTLFLPHGVIGLLRR 354


>gi|78214119|ref|YP_382898.1| putative membrane protein of urea ABC transport system
           [Synechococcus sp. CC9605]
 gi|78198578|gb|ABB36343.1| putative membrane protein of urea ABC transport system
           [Synechococcus sp. CC9605]
          Length = 382

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/354 (11%), Positives = 99/354 (27%), Gaps = 34/354 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             +    + L    + L            ++  ++  +       A G+ ++ G  GLLS
Sbjct: 4   FKRLIPWILLAFAFFILPAMADKDLFGFSQFRLNLFGRYFSLAFVALGIDLIWGYTGLLS 63

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L   I +++G Y+  +       + +               +  LP          ++  
Sbjct: 64  LGQGIFFSLGGYAIAMHLLLVTKNDFTTGANGLPKFFENYGVDQLPFFWEPFWSFPVSIA 123

Query: 128 IMSEIFQNI--------------------LIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
            +  +   +                    + +   +            +        S  
Sbjct: 124 AIFIVPSIVAGLVGYLIFRNRIKGVYFSIITQASLMVFYHFFNGQQKLVNGTNGLKTSTT 183

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
             F   +     ++  Y + L +   +  +  +L      +A   IRD++          
Sbjct: 184 EIFGLQAGSDDAQLLFYRITLILLPFAFLLCKYLTSGRFGDALIGIRDDEPRLRFSGFNP 243

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
              K+  F V+    G++GA +      +SP     S +I ++  V +GG  +L      
Sbjct: 244 TPFKVIVFVVAGGLAGVSGALYTVQSGIVSPQFMSISMSIEMVIWVAVGGRGTLVGPILG 303

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             I+  +  L                 +       +       V+++    +  
Sbjct: 304 AVIVNYLRSLVSE--------------ALPEAWLFVQGALFVFVVVLMPDGIYG 343


>gi|323703486|ref|ZP_08115133.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574]
 gi|323531576|gb|EGB21468.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574]
          Length = 297

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 96/307 (31%), Gaps = 22/307 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           + + +      +Y + A G ++V G L L++        + AY        + L  W+  
Sbjct: 8   QNLANGVSLGSLYALIAIGYTMVYGILRLINFAHADLLMVAAYIAFYGILVFSLPWWVSF 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ +I+   G+ +   + +   D   I+ LI +     +L     +  G          
Sbjct: 68  IIAVVITALLGVSIEKVAYRPLRDAPRISVLISAIGVSFLLENLGIVAIGARPKTFPRPE 127

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                        +      V +      + +    L  ++   + +T I  A R +  +
Sbjct: 128 S----------MVWNIKIGDVSFLSLAIIIPVVTIILLLAVEFLVNKTKIGTAMRAVSRD 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    +   +     + F V S    + G  ++    +I P M      +      ++G
Sbjct: 178 FETASLMAVDVNKVISTTFVVGSGLAAVGGIMWSLQYPQIDPLM-GVFPGLKCFIAAVMG 236

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++        IL                  + F    +        + L  ++L + 
Sbjct: 237 GIGNIKGAMLGGFILGMGEVFL-----------VAFMPDLSGYRDAFAFVILIFILLFKP 285

Query: 337 HSLLRLR 343
             +L  +
Sbjct: 286 TGILGEK 292


>gi|260462642|ref|ZP_05810848.1| ABC transporter related protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259031548|gb|EEW32818.1| ABC transporter related protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 620

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 56/334 (16%), Positives = 106/334 (31%), Gaps = 9/334 (2%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            L +V  LLL            +  +     I +    GL I  G+ G++S        +
Sbjct: 26  ALCMVVVLLLMALAAFVFGGAAMQRVVTYAAIMLTAVLGLQIFSGNSGIVSFGQAAFVGL 85

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  IL     L    L  +   ++G         ++      +              
Sbjct: 86  GAYATGILTMPTALQRTALRDLPEFLAGYQLSFFAALAVVLVLAVVIGLLTGTPL----- 140

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
               +   +  +   +A  +      V            + +      +    +  ++  
Sbjct: 141 ---LRLTGSSASIATLAMLIIVYTLLVAGREITRGSQPFYGVPREVGLWTAAAVASVALV 197

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
                R T+   A R   ++++   ++      A+L+A+         AGA  A      
Sbjct: 198 AARLFRETSFGLASRAAANDERGAAAVGVDQRTARLAAWVAGVVAAMAAGAMMAQFLGAF 257

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP  F F     +++++I+GGMTS         + I V+E+            L     F
Sbjct: 258 SPRDFYFDLGFTMLAMLIVGGMTSSLGAFAGVIVTIVVIEVVRRFEGGGEVLGLHLPVLF 317

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            +    ++ IA+ LVI  R   L   R  +    
Sbjct: 318 GLTQ-GVLAIAMILVIWQRPTGLFGERELNLLRR 350


>gi|261856189|ref|YP_003263472.1| urea ABC transporter permease [Halothiobacillus neapolitanus c2]
 gi|261836658|gb|ACX96425.1| urea ABC transporter, permease protein UrtC [Halothiobacillus
           neapolitanus c2]
          Length = 384

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/329 (12%), Positives = 88/329 (26%), Gaps = 36/329 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG---------- 85
             Y  +   + L Y   A  L ++ G  G+LSL   I + +G Y   +            
Sbjct: 34  DIYRLNNVGKYLTYAFAAVSLVMLWGHAGILSLGQGIFFGVGGYCMAMYLKLEASDPAST 93

Query: 86  --SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
                      +                         ++  A L           +   +
Sbjct: 94  ARQTTPGIPDFMDWNQITQLPLFWEPFHSLPFTILAIFVVPAVLAYIVGAAMFKRRVGGV 153

Query: 144 TNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLLGMCFL 193
                   +A  L  L    +                 +  +    +  +YY+   +   
Sbjct: 154 YFAIITQAIAAILTILVVGQQGYTGGINGITDLKTLHGWNINTDSAKYILYYINGVLLVG 213

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              +  ++  + +      +RD +         +   K+  F++S+    + GA F    
Sbjct: 214 VILLCRYVLSSKLGRLLLAMRDKEDRVRFSGYDVSNFKIFVFSLSAIISAIGGAMFTLQV 273

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             +SP       +I ++ +  +GG  SL        ++                    F 
Sbjct: 274 GFMSPTFVGIVPSIEMVILAAVGGRLSLIGAVYGALLV--------------NYGKSAFS 319

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +F      LM      V++   + L  L
Sbjct: 320 ETFPALWLFLMGGLFIGVVMFFPNGLAGL 348


>gi|153007252|ref|YP_001381577.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5]
 gi|152030825|gb|ABS28593.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5]
          Length = 309

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 51/314 (16%), Positives = 100/314 (31%), Gaps = 24/314 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G ++V G L L++      Y +GA++   LG+            
Sbjct: 8   LVNGLSLGTIYALIALGYTMVYGVLKLINFAHGDVYMVGAFAGYYLGNALDVGDEPTLMK 67

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           ++++ +   A+ +    +I  L     R      + +    +   +   ++    G   I
Sbjct: 68  AVFVTLGAMAICALLGVVIERLAYRPLRHRARLTSLITAIGVSFLLEYGFQLQPFGFLPI 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                         +L+       + V    +    LL    L  ++   + RT    A 
Sbjct: 128 EFPPGPT--PRFFPALVERSEIELAGVAISNYDVIGLLVAVGLMLALQFIVYRTRFGTAM 185

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +  + +    +   +       FA+ SA    AG   A  R RI   +F     +   
Sbjct: 186 RAVSFDPQVAGLMGIPVNRVIAWTFALGSALAAAAGILNAVPRPRID-PLFGLMPGLKAF 244

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
              +LGG+ S+        +L    E   G                +     +    L L
Sbjct: 245 VAAVLGGIGSVPGAMVGGLVLGLAEEFVSGYTS-------------SSYRDAIAFAVLIL 291

Query: 331 VILMRSHSLLRLRT 344
           V+L+R   +     
Sbjct: 292 VLLLRPEGIFGRAR 305


>gi|229084928|ref|ZP_04217181.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus Rock3-44]
 gi|228698401|gb|EEL51133.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus Rock3-44]
          Length = 339

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 61/324 (18%), Positives = 130/324 (40%), Gaps = 31/324 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 20  VAVLVCLSIFPFVNDSRSLLILFTQIFIFAIFAMSFDLLLGYTGIVSFGHCMFFGIGAYC 79

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  RY    +S ++ I ++ +++     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 80  VALLFDRYEVSIMSFFIGIALAVILAAIISYIIGLLSLRLKSHFYAMLTLAVSQLFFVLA 139

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YY+ LG   +   +
Sbjct: 140 EKWRAVTHGGDGFTFGVPDMFRDRF-------------------AFYYITLGCLLVIFLL 180

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   I+
Sbjct: 181 LRLFTQSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFIN 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L       
Sbjct: 241 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATQYPIF 291

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
            R T  + +   +V+L     L+ 
Sbjct: 292 ERWTIFLGLLYIIVLLGFPTGLVG 315


>gi|188025703|ref|ZP_02959520.2| hypothetical protein PROSTU_01383 [Providencia stuartii ATCC 25827]
 gi|188022806|gb|EDU60846.1| hypothetical protein PROSTU_01383 [Providencia stuartii ATCC 25827]
          Length = 316

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 86/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW-LLIP 97
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +    +   
Sbjct: 20  LLNGLTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAGLMMLGIDVGWI 79

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           + A    A  ++                      I     I           +    R  
Sbjct: 80  LIAAAFVAAIVVSSSYGWSIERVAYRPVRHSKRLIALISAIGMSIFLQNYVSLSQGSRDL 139

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + +                      + +       ++ L++R + +  A R   ++ 
Sbjct: 140 ALPSLITGQWVLGESDGFEASITKMQLTIWVVTLLAMLALTLFIRYSRMGRACRACAEDL 199

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 200 KMASLLGINTDRVISLTFVIGATMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 258

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     +        +  ++ F               L  V+L+   
Sbjct: 259 IGSIPGAMLGGIILGVAEAMTSAYLSTEYKDVVSFG-------------LLIGVLLIMPT 305

Query: 338 SLLRL 342
            +L  
Sbjct: 306 GILGR 310


>gi|146311643|ref|YP_001176717.1| inner-membrane translocator [Enterobacter sp. 638]
 gi|145318519|gb|ABP60666.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Enterobacter sp. 638]
          Length = 357

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 55/342 (16%), Positives = 104/342 (30%), Gaps = 27/342 (7%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           IL +L V+  L L           ++ ++  +IL Y + A  L +V G  G+LSL   I 
Sbjct: 24  ILAILLVLPFLALLPESHPLALSTWMLTLVGKILCYAVVAVALDLVWGYAGMLSLGHGIF 83

Query: 74  YAIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           +A+G Y+  +                   W  +P     +      + L  +      L 
Sbjct: 84  FALGGYAMGMYLMRQASGEGLPAFMSFLSWSELPWFWWGTQHFAWALVLIVMIPGLLALI 143

Query: 124 IATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
                     +     ++       G    +  +  +              FP +     
Sbjct: 144 FGWFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFPVTATTTR 203

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           I ++   + +   S ++  WL ++        +RD +             KL  + +S+ 
Sbjct: 204 IALFLATVALLVASLALGFWLAKSKFGRILTAVRDAENRLTFCGYDPRGFKLLVWTLSAV 263

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             G+AGA +      I+P     + +I     V LGG  +L       A++ G       
Sbjct: 264 LCGLAGALYVPQVGIINPGEMSPTNSIEAAIWVALGGRGTLVGPVIGAALVNGAKSY--- 320

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                      F  +        +      V L     +  L
Sbjct: 321 -----------FTVAMPEYWQLFLGGIFIAVTLFLPRGVYGL 351


>gi|304396492|ref|ZP_07378373.1| urea ABC transporter, permease protein UrtC [Pantoea sp. aB]
 gi|304356001|gb|EFM20367.1| urea ABC transporter, permease protein UrtC [Pantoea sp. aB]
          Length = 357

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 59/346 (17%), Positives = 101/346 (29%), Gaps = 27/346 (7%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I   L V+  L L           Y  ++  +IL Y + A  L +V G  GLLSL   +
Sbjct: 23  AITLALLVMPFLALLPAAHPLAISTYTLTLVGKILCYAVVAVALDLVWGYAGLLSLGHGL 82

Query: 73  AYAIGAYSYVIL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
            +A+G Y+  +               S                      +  L       
Sbjct: 83  FFALGGYAMGMYLMRQAAGEGLPAFMSFLSWRELPWFWTGTEYFAWALCLSMLVPGLLAL 142

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
            +   A     +     ++       G    +  +  +              F  +    
Sbjct: 143 LFGFFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFSVTATGT 202

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
            I ++   + +  LS  I   L R+        +RD +             KL  + +S+
Sbjct: 203 RIGLFIATVLLLLLSLVIGFTLARSKFGRVLTAVRDAENRLMFCGYDPRGFKLLVWTLSA 262

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
              G+AGA +      I+P     + +I     V LGG  +L       AI+ G      
Sbjct: 263 VLCGLAGALYVPQVGIINPGEMSPANSIEAAIWVALGGRGTLIGPLLGAAIVNGARSF-- 320

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                       F  +F       + +   LV L   H ++ L   
Sbjct: 321 ------------FTVAFPEYWLFFLGLMFILVTLFLPHGVIGLLRR 354


>gi|257438527|ref|ZP_05614282.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Faecalibacterium prausnitzii A2-165]
 gi|257199106|gb|EEU97390.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Faecalibacterium prausnitzii A2-165]
          Length = 292

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 96/305 (31%), Gaps = 25/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G S+V G + LL+        +GAY    + ++ GL     +  
Sbjct: 8   LINGLSLGSIYALIALGYSMVYGIILLLNFAHGDVIMVGAYMSWFVMNQLGLGPVTAVCA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+++   +     +   I+ LI +      L     +  G            
Sbjct: 68  TIITCTLLGVVIEKVAYTPLRNAPRISLLITAIGVSFFLEYTAELVMGS----------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + S      F    V   +     L+        +   +++T +  A R + ++  
Sbjct: 117 GAKVIPSYYGNKTFMIGSVPLGLTSVITLVVTVLSMLVLTFLVQKTKLGKAMRAVSEDMD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FAV SA  G+    +  S  + +P M      +      +LGG+
Sbjct: 177 AARLMGINVNSTISFTFAVGSALAGIGSVLYCCSYPQATPTM-GSMLGLKAFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +         +    +   + F               L +V+L +   
Sbjct: 236 GSIPGAMIGGIAIGLCECFVSAIGLSAWKDAVTF-------------AILIIVLLFKPTG 282

Query: 339 LLRLR 343
            L  +
Sbjct: 283 FLGRK 287


>gi|194292064|ref|YP_002007971.1| branched-chain amino acid inner-membrane translocator [Cupriavidus
           taiwanensis LMG 19424]
 gi|193225968|emb|CAQ71915.1| Branched-chain amino acid inner-membrane translocator [Cupriavidus
           taiwanensis LMG 19424]
          Length = 332

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 57/302 (18%), Positives = 116/302 (38%), Gaps = 24/302 (7%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++  ++LIY M A   ++++G  GLLS    I + +G+Y+  +  +R  L + L + ++ 
Sbjct: 33  TLATEVLIYAMAAMACNLLLGYTGLLSFGQGIFFGLGSYAVGLALTRASLPMPLALLLAI 92

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
            I  A   ++G  +++ RG Y  + TL  +++F  +      IT G  G+    R     
Sbjct: 93  AIGAAAAALVGWFAIRQRGTYFVMLTLAFAQMFYFLAYTAPGITGGDNGLLDIPRPP--- 149

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                 +         +      Y  +  +       +L +  + +      IRDN++  
Sbjct: 150 ------LSVAGHALVPLASPWQFYGFVAVLFLAVFLAVLRVTESVLGRTLLAIRDNEERA 203

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++   +   KL AF VS A  G+AGA  A            +  + +++ + ++GG  +
Sbjct: 204 LAVGYNVKAFKLLAFMVSGAVTGLAGALHAMLTGIAPLTNIDYHASEMILVMTVIGGTGN 263

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +       A  + + +    +   +                 L+   L  V L     L 
Sbjct: 264 IFASVLGAAFYVLLADWLSTLWPRW---------------LMLLGFLLIAVSLFMQRGLW 308

Query: 341 RL 342
            L
Sbjct: 309 GL 310


>gi|113868586|ref|YP_727075.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113527362|emb|CAJ93707.1| ABC-type transporter, permease component: HAAT family [Ralstonia
           eutropha H16]
          Length = 308

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 94/297 (31%), Gaps = 16/297 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--------YVILGSRYGL 90
           + +      IY + A G ++V G +G+++      Y IGAY             G    L
Sbjct: 12  LVNGLTLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGAQAGYPLPL 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS +++G  G  +   + +       +  LI +      L  +  I  G    
Sbjct: 72  VLGAALLVSVLVTGVYGYAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +   I F       V        ++     L  ++ L++ R+ +  A 
Sbjct: 129 ----RDVSVPVLISGAIEFQMGSDFTVTVPYSRLLIVGVTLVLMIALTLFIGRSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ +    L           F + +    + G     +  +++     F   I   
Sbjct: 185 RACAEDMRMANLLGIDTNKVISFTFVLGAMLAAVGGVLIGLTIGKLN-PFIGFIAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  +LGG+ S+        +L        G     +  ++ F     +       + 
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPAEYKDVVAFSLLVLVLLFRPTGLL 300


>gi|313114340|ref|ZP_07799873.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310623334|gb|EFQ06756.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 292

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 97/305 (31%), Gaps = 25/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G S+V G + LL+        +GAY    + ++ GL     +  
Sbjct: 8   LINGLSLGSIYALIALGYSMVYGIILLLNFAHGDVIMVGAYMSWFVMNQLGLGPVTAVCA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+++   +     +   I+ LI +      L     +  G            
Sbjct: 68  TIITCTLLGVVIEKIAYTPLRNAPRISLLITAIGVSFFLEYTAELILGS----------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +      F    V   +     LL        +   +++T +  A R + ++  
Sbjct: 117 GAKVIPAYYTNQTFHIGSVPLGLTSVITLLVTVLSMLVLTFLVQKTKLGKAMRAVSEDMD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FAV SA  G+    +  S  + +P M      +      +LGG+
Sbjct: 177 AARLMGINVNSTISFTFAVGSALAGIGSGLYCCSYPQATPTM-GSMLGLKAFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +         +    +   + F               L +V+L++   
Sbjct: 236 GSIPGAMIGGIAIGLCECFVSAIGLSAWKDAVTF-------------AILIIVLLVKPTG 282

Query: 339 LLRLR 343
            L  +
Sbjct: 283 FLGRK 287


>gi|148253917|ref|YP_001238502.1| putative high-affinity branched-chain amino acid transport system
           permease [Bradyrhizobium sp. BTAi1]
 gi|146406090|gb|ABQ34596.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter membrane protein 1,
           HAAT family [Bradyrhizobium sp. BTAi1]
          Length = 628

 Score = 84.1 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 57/320 (17%), Positives = 122/320 (38%), Gaps = 33/320 (10%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
              L  + +    +  Y  ++G +I I+V+FA  L  ++   GL S      + +GAY  
Sbjct: 315 VVALALVAMLPFIAGNYALTVGAEIAIFVIFAASLHFLMAVGGLASFGHAAYFGLGAYGV 374

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
             L    GL + + I +  ++      + G  +++  G Y A+ TL  ++I  +I  +W 
Sbjct: 375 AFLAKMAGLPMIVCILLGPLLGALGAAVFGAFAVQLSGVYFAMLTLAFAQIVWSIAFQWV 434

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G  G                      +P  +       Y++ LG+     S++  +
Sbjct: 435 AVTGGDNG------------------ILGLWPEKWAASPSHFYWLALGVSAFVVSVLRLI 476

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +    A R +RD+     S+       + +AF ++    G+ GA FA  +  + PD  
Sbjct: 477 TFSPFGYALRGMRDSPLRSESIGINGKRIQWTAFIIAGTTAGIGGALFAYLKGSVFPDNM 536

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             S ++  + +V+LGG+ ++        +   +                           
Sbjct: 537 GISLSVDALVMVLLGGVETVPGAIFGAIVYKALNIWLVSQ---------------TDWSK 581

Query: 322 TLMVIALFLVILMRSHSLLR 341
            ++ I + L++++    ++ 
Sbjct: 582 LVLGIFIVLIVVVFPKGIVG 601



 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 96/311 (30%), Gaps = 28/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--SRYGLSIWLLI 96
             +         + A GLSI+ G   +++      Y +GAY    L       L  W  I
Sbjct: 8   FLTGLASAASLFLVASGLSIIFGVTRIVNFAHGAFYMLGAYIAFSLTERLSGALGFWGGI 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V+A+     G+I+ +  L+       +  L+ +     ++     +  G          
Sbjct: 68  VVAALAVAVIGVIVEIVLLRRIYHAPELFQLLATFGLTLMVEDLVVLIWGPD-------- 119

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                  R+                +  ++++    +  ++ L  +RT      R    +
Sbjct: 120 --DLVGRRAPGFKGAVDFFGQNIPSYDLFLIVLGPVVLGALWLLFQRTRWGILVRAATQD 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +    +L     +   S FAV      + GA                   + V  +V++G
Sbjct: 178 RDMVAALGVNQKWLFTSVFAVGVFLAALGGALQIPR--DAVHHAMDLRIIVEVFVVVVIG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+     A  ++  +      +              F      L+ + + +V+++R 
Sbjct: 236 GLGSILGAFVAAVLVSELNAFGILI--------------FPTISLILVFLVMAVVLVIRP 281

Query: 337 HSLLRLRTPSN 347
             L   +    
Sbjct: 282 WGLFGKKEAPA 292


>gi|333023601|ref|ZP_08451665.1| putative branched-chain amino acid ABC transporter permease
           [Streptomyces sp. Tu6071]
 gi|332743453|gb|EGJ73894.1| putative branched-chain amino acid ABC transporter permease
           [Streptomyces sp. Tu6071]
          Length = 379

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 89/272 (32%), Gaps = 12/272 (4%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           +   A G  +++G  GLLS    + +A G+Y+        GL  WL   +  ++  A  +
Sbjct: 66  FGGLATGYDLLLGRTGLLSFGHALYFAAGSYATNTFLREAGLPFWLAAVLGLVLGVAVAL 125

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
           + G  SL+  G   ++ TL  ++    ++ +      G                + +   
Sbjct: 126 LFGAVSLRVTGIGFSMVTLAFAQAASLLVSRDPGGFTG------------GEEGISAPGD 173

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                   +     +Y++ L    L  +++     +     W  I++N++    L     
Sbjct: 174 ALPASLVGIGNTANLYWIALAFLVLCLAVVHRTTHSPTGRVWEGIKENERRVEVLGLRPY 233

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
             KL AF V+     + G          +P        + ++ +V+LGG  +        
Sbjct: 234 GFKLVAFVVAGTLAALGGIVHLLLTGGSTPATTTSEFTLSLLVMVVLGGSGTRWGPMLGG 293

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
            +          +      + L       +  
Sbjct: 294 ILYTWADHRLGDLANSATVADLPGVLRVPLSQ 325


>gi|311105750|ref|YP_003978603.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310760439|gb|ADP15888.1| inner-membrane translocator 29 [Achromobacter xylosoxidans A8]
          Length = 338

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 63/312 (20%), Positives = 119/312 (38%), Gaps = 30/312 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                  ++ ++ I I+++ +FA G  +V G LG++S         G Y+  +   RYGL
Sbjct: 22  PFCTQNDFLLNLSILIMVWSIFAVGFDLVFGLLGMVSFGHAAFLGTGGYALALATQRYGL 81

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-IKWKPITNGKAG 149
                + ++ +   AC  I  + +L+  G + A+ TL +S++   +   K +  T G  G
Sbjct: 82  PFEAGLALAIVAGAACAWIFSVFALRVSGIFFALVTLALSQLMYILADSKLREWTGGADG 141

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +    R    G                    +  Y+ +  +  L  +++  LR +    A
Sbjct: 142 LPGIGRPELAGIDFFD--------------TVNFYWYVAAIFALVMALMAMLRASPFGRA 187

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              +R N+     L   +   K   F VS A  G+AG   AA    ++P M  ++ +  V
Sbjct: 188 VAGVRQNEIRAAQLGYNVQRLKQITFLVSGAVGGLAGGLLAAVLMYMNPQMLHWTTSGDV 247

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           I + +LGG  +L        +   + E   G   Y++                ++ +   
Sbjct: 248 IIMTLLGGAGTLWGPVAGVLLFEALKEWLSGWTPYWYG---------------ILGLVFI 292

Query: 330 LVILMRSHSLLR 341
           L  L     +L 
Sbjct: 293 LATLYFPQGVLG 304


>gi|301166939|emb|CBW26518.1| putative transport system permease protein [Bacteriovorax marinus
           SJ]
          Length = 293

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 68/313 (21%), Positives = 128/313 (40%), Gaps = 43/313 (13%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS------RYGLSI 92
           I  + I   + ++ +  L+++ G  G  SL     +A+GAY+               L++
Sbjct: 5   IIHLSILCGVNIILSVSLNLINGICGQFSLGHAGFWAVGAYTAASFTVFSNLGLPPSLTL 64

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
                +  +++   G+I+G+P L+ RGDYLAIATL   EI + +++    I  G  G   
Sbjct: 65  IAGCIIGFIVAAIAGLIIGVPCLRLRGDYLAIATLGFGEIIRIVIMNTDAI-GGPRGFSG 123

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                                      +I  +Y +     ++  II  + R     A  +
Sbjct: 124 IP-------------------------KISNFYWVYLFVIITVLIITNIMRGTHGRAIIS 158

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           IR+++ A  S+       K  AF + + F G+AGA +A     + P+ F F  ++I++ +
Sbjct: 159 IREDEIAADSMGIYTFKYKTMAFVIGAGFAGLAGALYAHYTQFLHPNGFTFMMSVIILLM 218

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           VILGG+ S++       IL  + E+   M             + +     +  + L  ++
Sbjct: 219 VILGGLGSITGSIVGAIILTLLPEVLRLMGE-----------TISEWRMVIYSVLLITLM 267

Query: 333 LMRSHSLLRLRTP 345
           L+R   +      
Sbjct: 268 LLRPGGIFGKHEF 280


>gi|26989469|ref|NP_744894.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Pseudomonas putida KT2440]
 gi|24984337|gb|AAN68358.1|AE016468_12 branched-chain amino acid ABC transporter, permease protein,
           putative [Pseudomonas putida KT2440]
          Length = 354

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 70/330 (21%), Positives = 135/330 (40%), Gaps = 16/330 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +   +  L+ F+ L    +  +++++ I  L+  +   GL+++ G  G  S+      
Sbjct: 24  WPVGLPLLLLVAFVGLPWLGNDYWLNAILIPFLVLSLAGLGLNVLTGYTGQTSVGAAGFM 83

Query: 75  AIGAY-SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           A+GA+ +Y +L    GL + L +    +I+G  G++ G+PS + +G YL + TL      
Sbjct: 84  AVGAFATYGLLLRVPGLPLPLALIGGGLIAGLVGLLFGIPSSRIKGFYLMVTTLAAQFFL 143

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           + +  K+    N  +   ++     L +               +   +  Y + L    L
Sbjct: 144 EWVFAKFPWFYNHASSGTISAPRLELFSH-------------SLASPVGRYLLTLSCVVL 190

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-AS 252
              + + L R+ +   W  IRD   A   +   +   K  AFAVSS ++G+AGA +A A 
Sbjct: 191 LTWVAVNLVRSQVGRNWMAIRDMDTAASVIGIPVERYKRLAFAVSSFYLGIAGALWAFAY 250

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
               S   F  + +  ++ I+I+GGM S++      A +     L      + F   +  
Sbjct: 251 LGTSSAGSFDINRSFQILFIIIIGGMGSIAGNFIGAAFISLTPILLSHAGQWLFGGNVDA 310

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                     L    +   ++     L+RL
Sbjct: 311 G-QLQNLQKILFGCLIIWFLIKEPEGLVRL 339


>gi|218671204|ref|ZP_03520875.1| putative transmembrane component of ABC transporter [Rhizobium etli
           GR56]
          Length = 257

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 15/271 (5%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
             LI+ + A GL++ +G  G +SL      AIGAY   +L         + +P++     
Sbjct: 1   SWLIFTIAAMGLNLTLGYAGQISLAQASFMAIGAYITALLTLAGWH-WIVAMPLALFACF 59

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
             G+++G P+L+ +G +LA  TL  + +   +L     +T G  G+    R         
Sbjct: 60  VIGLLLGYPALRVKGHFLAFVTLAFNTLVFLVLRNEDWLTGGSIGLVGMPRP-------- 111

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
                  F     + ++  YY  L +   +A  +  + R+    A++ +R+N     SL 
Sbjct: 112 ------DFGLFSTMKQLPFYYFTLAVTAFAALAMWGIVRSPWGRAFKALRENPVRAESLG 165

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                  L AFA+ S + G+AG         I P  F  + ++ ++ +VI+GG       
Sbjct: 166 VDTRRITLLAFAIGSTYGGLAGTLITPLVQFIEPGSFALAHSLRILLMVIVGGAGYFFGP 225

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
                ++I + E+      YY     ++  S
Sbjct: 226 WVGAGVVILLPEVLRFTQGYYLIIYSRWSSS 256


>gi|148548213|ref|YP_001268315.1| inner-membrane translocator [Pseudomonas putida F1]
 gi|148512271|gb|ABQ79131.1| inner-membrane translocator [Pseudomonas putida F1]
          Length = 354

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 70/330 (21%), Positives = 134/330 (40%), Gaps = 16/330 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +   +  L+ F+ L    +  +++++ I  L+  +   GL+++ G  G  S+      
Sbjct: 24  WPVGLPLLLLVAFVGLPWLGNDYWLNAILIPFLVLSLAGLGLNLLTGYTGQTSVGAAGFM 83

Query: 75  AIGAY-SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           A+GA+ +Y +L    GL + L +    +I+G  G++ G+PS + +G YL + TL      
Sbjct: 84  AVGAFATYGLLLRVPGLPLPLALIGGGLIAGLVGLLFGIPSSRIKGFYLMVTTLAAQFFL 143

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           + +  K+    N  +   ++     L                 +   +  Y + L    L
Sbjct: 144 EWVFAKFPWFYNHASSGTISAPRLELFGH-------------SLASPVGRYLLTLSCVVL 190

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-AS 252
              + + L R+ +   W  IRD   A   +   +   K  AFAVSS ++G+AGA +A A 
Sbjct: 191 LTWVAVNLVRSQVGRNWMAIRDMDTAASVIGIPVERYKRLAFAVSSFYLGIAGALWAFAY 250

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
               S   F  + +  ++ I+I+GGM S++      A +     L      + F   +  
Sbjct: 251 LGTSSAGSFDINRSFQILFIIIIGGMGSIAGNFIGAAFISLTPILLSHAGQWLFGGNVDA 310

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                     L    +   ++     L+RL
Sbjct: 311 G-QLQNLQKILFGSLIIWFLIKEPEGLVRL 339


>gi|330815764|ref|YP_004359469.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia gladioli BSR3]
 gi|327368157|gb|AEA59513.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia gladioli BSR3]
          Length = 393

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 51/347 (14%), Positives = 102/347 (29%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + V    L+     A     Y  ++  + + Y + A  L +V G  G+LSL   + 
Sbjct: 50  IAIGIGVPLAALVVPESSAFHLSAYAMTIAGKFMCYAIGALALDLVWGYCGILSLGHGLF 109

Query: 74  YAIGAYSYVILGSRYGLS----------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           +A+G Y+  +   R                + +   ++     G      +L       A
Sbjct: 110 FALGGYAIGMYLMREIGHDGVYGSSLPDFMVFLNWKSLPWYWSGSDHLAVALVLVVLVPA 169

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT--------VRSLIRFFRFPSS 175
           +   +         +K   ++     +  A  L F                 R   +  +
Sbjct: 170 VVAWVFGFFTFRSRVKGVYLSIITQAMTFAAMLLFYRNETGFGGNNGFTDFKRLAGYGIT 229

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +         L+      +  + +      +RD +     L  + +  KL  +
Sbjct: 230 SPGMRTVLLLASFATLVLAFLAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFIW 289

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+   G+AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 290 TVSAVLCGIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 349

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                               F       + +   LV L+    ++ L
Sbjct: 350 SFFTAY--------------FAEYWLFFLGLIFVLVPLLMPRGIVGL 382


>gi|313903204|ref|ZP_07836597.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Thermaerobacter subterraneus DSM 13965]
 gi|313466515|gb|EFR62036.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Thermaerobacter subterraneus DSM 13965]
          Length = 292

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 91/304 (29%), Gaps = 25/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        IY + A G ++V G + L++      + IGA++     + +GL     + +
Sbjct: 8   LLIGLSVGTIYALIALGYTMVYGIIKLINFAHGEVFMIGAFTGYYALTAWGLGFIPALLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +S   G+ +   + +   ++  +A L  +      +        G            
Sbjct: 68  AMGVSALLGVTIERVAYRRLRNFPRLAALTTAIGVSLFIQYTTIYLRGAQSEAYPSLFPN 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                       R         +    +L     L A +   +++T    A R +  + +
Sbjct: 128 -----------RRLEILGAGINLDALVILAVSVALMAILQFIVQKTRTGKAMRAVSFDLE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG  +     RI P M      +      ++GG+
Sbjct: 177 AARLMGIPVNRTISITFAIGSALGGAAGVVYGLYYTRIDPLM-GVLPGLKAFVAAVVGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  V  L        F     F     +                R   
Sbjct: 236 GSIPGAMVGGLVIGMVETLVSAAGLSLFRDAAAFLILILILLF-------------RPEG 282

Query: 339 LLRL 342
           L   
Sbjct: 283 LFGR 286


>gi|300811647|ref|ZP_07092123.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300497348|gb|EFK32394.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 292

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 49/288 (17%), Positives = 91/288 (31%), Gaps = 12/288 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G  IV G   LL+      Y +GAY      +         +  
Sbjct: 8   LINGLSLGSIYALLALGYMIVYGISKLLNFAHGDVYMLGAYWGYYTINYLHFGFITALIT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  G+I+   + +   +   +A LI +      L                  +  
Sbjct: 68  AMIVCGLAGVIIEAVAYRPLRNAPRVAALITAIGVSFFLENGMSY-----------LVTS 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I+   F    V        +L+    L+  ++  +  T    A R++  +  
Sbjct: 117 DTRNFPQVIKRKTFDLGGVTISNIQLIILVTTLILTLGLMYIINYTKTGRAMRSVSTDYD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   I       FA+ SA  G AG       + I P M   +  I      +LGG+
Sbjct: 177 AASLMGININHTVSITFALGSALAGAAGVLIGLYYNSIDPLM-GMTPGIKAFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            S+   A    ++  +      M F  F     +     +       +
Sbjct: 236 GSIPGAAVGGFLIGLLETAVQAMGFSAFRDAAVYIVLIVILLVLPGGL 283


>gi|312868450|ref|ZP_07728650.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus parasanguinis F0405]
 gi|311096195|gb|EFQ54439.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus parasanguinis F0405]
          Length = 296

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 107/303 (35%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + ++ ++ + +
Sbjct: 12  LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMVGAFMGYFLLNSWKVNFFVALLL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +       IA LI +     +L        G            
Sbjct: 72  AMVGTAILGVVIEYLAYRPLRHSTRIAALITAIGVSFLLEYGMVFFVGANTRS------- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I+  R+    +        +L    FL  ++   +++T +  A R +  +  
Sbjct: 125 ----FPQVIKTLRYNFGPISISNIQLMILGVSVFLMVALQFIIQKTKMGKAMRAVSVDSD 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G  G       + I P M   +  I      +LGG+
Sbjct: 181 AAQLMGINVNRTISFTFALGSALAGAGGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +      +               +     ++   L +++L+R   
Sbjct: 240 GIIPGAALGGFVIGLLETFATAIG-------------LSDFRDAIVYAILIVILLIRPAG 286

Query: 339 LLR 341
           +L 
Sbjct: 287 ILG 289


>gi|288921875|ref|ZP_06416089.1| inner-membrane translocator [Frankia sp. EUN1f]
 gi|288346770|gb|EFC81085.1| inner-membrane translocator [Frankia sp. EUN1f]
          Length = 675

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 56/312 (17%), Positives = 120/312 (38%), Gaps = 17/312 (5%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
           G            I   +  +    L ++ G +G +SL  +    +  ++   + +  G+
Sbjct: 334 GLPLLSSQWRLGMITSGVAAVLCLSLVVLTGFVGQISLAQMSLAGVAGFTLSKVTADGGV 393

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              +   ++ + + A G+++ +P+L+ RG +LA+ TL  +   +  + K   +T G +G 
Sbjct: 394 PFPVGPLIAVLAATALGLLVAVPALRVRGLHLAVVTLAAAVAIEEFIFKNPKVTGGLSGS 453

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            V     F  +             +     +   Y +L +   +A  +  LRR  +    
Sbjct: 454 TVPQPEIFGFS-------LGIRGGAEDFPRVTFGYFVLVVTVATALAVAALRRHELGRRM 506

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +R +++A  +        KL+  A+SSA  G+ G   A  + ++S   +    ++ ++
Sbjct: 507 LAVRGSERAAAAAGINAARVKLTGAAISSALAGVGGTLLAYQQGQLSYASYSTFTSLGLL 566

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
             V LGG+TS+S       +           +    +  L          T ++ I L +
Sbjct: 567 VAVYLGGITSVSGALLGGTL----------YSGGLVSVALHEWAGLGDYETLILSIGLII 616

Query: 331 VILMRSHSLLRL 342
           V +     L  L
Sbjct: 617 VAIRSPDGLAGL 628


>gi|328543487|ref|YP_004303596.1| Inner-membrane translocator [polymorphum gilvum SL003B-26A1]
 gi|326413231|gb|ADZ70294.1| Inner-membrane translocator [Polymorphum gilvum SL003B-26A1]
          Length = 326

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 110/294 (37%), Gaps = 3/294 (1%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            ++L    +V  L    F+     Q    ++  +ILIY + A  L+ ++G  G++S    
Sbjct: 1   MRVLGFAVLVAALAALPFVTDALGQAAWLALATRILIYGIAAASLNFILGYGGMVSFGHA 60

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             + IG Y   IL + +     L   +         + + +         +   +L    
Sbjct: 61  AFFGIGGYVVGILFTHHASGEPLFGVIPGTDQMLVTLPVAILVAGLFAAAIGALSLRTGG 120

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +   ++                    + G     + R    P   +  +  +Y+V+L + 
Sbjct: 121 VQFIMITLAFAQM---LFFLFVSLKAYGGEDGIIIRRTNALPGLNMRDKATLYWVVLTIA 177

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L    +  L  ++       IR N++   +L       KL+AF +S    G+AGA  A 
Sbjct: 178 VLFFLGLRRLINSSFGAVISGIRQNERRMAALGIPAYRYKLAAFVLSGMGAGLAGALMAN 237

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
                SPDM  ++++  ++ +VILGG+ +L        + + +       + ++
Sbjct: 238 FLRFASPDMMHWTKSGELMIMVILGGVGTLFGPFLGAGVFLMLETFLASWSEHW 291


>gi|170741352|ref|YP_001770007.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168195626|gb|ACA17573.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 442

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 51/316 (16%), Positives = 117/316 (37%), Gaps = 32/316 (10%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-----SYVILGS 86
              S     +M   + I ++FA   ++++G  GLLS    + Y +GA+        +   
Sbjct: 47  QVFSGGTALTMLSLMGIAIVFALSYNMLLGQTGLLSFGHAVYYGLGAFFTVHAMNAVAAG 106

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
           R  + + ++  V A      G++ G  S +  G   A+ +L ++E+  +          G
Sbjct: 107 RLPIPLAVMPLVGAATGLGFGLVFGAVSTRRAGTVFAMISLGLAELVASGSHILHSFFGG 166

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
           + G+              +  +  R        +I +YY++ G C + A ++  + RT +
Sbjct: 167 EEGVT------------TNRTKMLRLFDLSFGPQIQVYYLIAGWCLICALLMYGITRTPL 214

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                 +R+N +    +       +L AF +S+ F G+AGA  A + + ++      +++
Sbjct: 215 GRLCNAVRENPERVEFIGYEPRTVRLIAFCLSAGFAGVAGALAAINFEIVNVSYLSLNQS 274

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            +V+    +GG+           ++  +      +   +                    +
Sbjct: 275 GVVLLAAFIGGIGHFVGPVIGAVVVTILQVSLSDLTEVW---------------QLYFGL 319

Query: 327 ALFLVILMRSHSLLRL 342
               +++     L  L
Sbjct: 320 LFIAIVMFAPGGLAGL 335


>gi|254304400|ref|ZP_04971758.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter membrane protein [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
 gi|148324592|gb|EDK89842.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter membrane protein [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
          Length = 295

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 91/306 (29%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL---GSRYGLSIWLL 95
           I +      IY + + G ++V G   L++        IGAY+ +      +  GL +W  
Sbjct: 7   IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYTSLFSIPLFTSLGLPVWAT 66

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  + +I    G +    + +   +   I+ LI +      L                  
Sbjct: 67  VIPAIIICALIGCLAERIAYRPLRNSPRISNLITAIGVSLFLENVFMKVFTPNTRSFPKI 126

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                 +            + +         ++    LS  + L++++T    A      
Sbjct: 127 FNQGPISF----------GNGINISFGAVVTIVTTLILSIGLQLFMKKTKYGKAMIATSQ 176

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   +   +       FA+ S    +    + ++  +I P M      I      +L
Sbjct: 177 DYAASELVGINVDRTIQLTFAIGSGLAAVGSVLYVSAYPQIQPLM-GSMLGIKAFVAAVL 235

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  L        IL  V  L              F               L +V+L +
Sbjct: 236 GGIGILPGAVLGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIIVLLFK 282

Query: 336 SHSLLR 341
              +L 
Sbjct: 283 PTGILG 288


>gi|111222941|ref|YP_713735.1| putative ABC transporter ATP-binding protein [Frankia alni ACN14a]
 gi|111150473|emb|CAJ62172.1| putative ABC transporter ATP-binding protein [Frankia alni ACN14a]
          Length = 930

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 113/303 (37%), Gaps = 19/303 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I   +Y + A  + +V G  G +S   +    + A+    +     ++      V
Sbjct: 347 LRDGLISTFVYAVIALSVVVVTGYAGQVSFAQLPLAGVAAFLVGPISEHLHIAFPFAPIV 406

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+ +   G+++GLP+L+ RG  +A+ T  ++   + +  +                ++ 
Sbjct: 407 AALGATVVGVVIGLPALRIRGLTVAVVTFALAFALEALWFRNLDFVGSSGAAVPNPEIFG 466

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V S   F R     V   + +   L            WLR + + +    +R N++
Sbjct: 467 WNLGVGSGSDFPRVTFGVVCLLVLVVVGLGVA---------WLRTSTLGSQMLAVRANER 517

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           +  +    ++  KL+AFA+ +   G+ GA  A     ++ D F     +     V L G 
Sbjct: 518 SAAAAGVNVVRVKLAAFALGAFIAGIGGALLAYKFGNVTNDPFTAIVGLTFFGTVYLAGT 577

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+S    A   ++               +L+    S  + +  +  + L L ++     
Sbjct: 578 TSVSGGLLAGVTVV----------NGLLYALVDKVVSTGVWYEAVAALLLILTVVFNPEG 627

Query: 339 LLR 341
           ++ 
Sbjct: 628 VVG 630



 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 85/269 (31%), Gaps = 7/269 (2%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           ++        ++   A  L+I   S G+++        + AY Y  L S   +++    P
Sbjct: 7   FLLLGLGNGAVFGALALALTITYRSSGIINFATGSIALLAAYVYAYLRSGELINLIPGTP 66

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG-----KAGIYV 152
            +  I G   M   LP        L +   ++                           +
Sbjct: 67  TTIDIGGDLPMGAALPIAVVLSALLGLGLHLVIFRPLRNAPPVAKAVASLGVSLAITALI 126

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
           A R+      V  +     + +  +       Y+ + +  L+A+I L   RT    A R 
Sbjct: 127 AARMGTTAVAVDPIFPTDLWKAGSINVPSDRVYLAITVLALAAAISLVFARTRFGLATRA 186

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
              ++K  +    +        + +SSA  G+ G   A     I   +      +  ++ 
Sbjct: 187 TASSEKGAYVSGISPDRIAAGNWMISSAAAGLVGILIAPIVPLI--PVSYTLFIVPALAA 244

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGM 301
            I+G    +   A A  ++  +      +
Sbjct: 245 AIMGRFQYVLWAAVAGIVIGALQSEAQYL 273


>gi|152994762|ref|YP_001339597.1| inner-membrane translocator [Marinomonas sp. MWYL1]
 gi|150835686|gb|ABR69662.1| inner-membrane translocator [Marinomonas sp. MWYL1]
          Length = 303

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 87/303 (28%), Gaps = 14/303 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y + AY   I  +          P+
Sbjct: 8   LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMVSAYITAIALALLTFFGIESFPI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    + +                   S +   I      +               
Sbjct: 68  ILVGTLFLTVAVTGAYGWVIERIAYRPLRSSSRLSVLISAIGMSLILQNYVQLSQGANQQ 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+ +    F     FV        +L         +   +++T +    R  + ++K
Sbjct: 128 GVPTLLTGALRFHVGDGFVQITYMKLLILFISILGMGVLTYVIQKTKLGRMCRATQQDRK 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L         + F + +    +AG             +  F   I   +  +LGG+
Sbjct: 188 MASILGIDTDKVISTVFVIGAVMAALAGVLVTLDYGAFDFYV-GFIIGIKAFTAAVLGGI 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL     L  G+    +  +  F               L L++++R   
Sbjct: 247 GSLPGAMLGGLILGLSEALFAGLISSDYKDVFSFS-------------LLVLILIVRPSG 293

Query: 339 LLR 341
           LL 
Sbjct: 294 LLG 296


>gi|160899918|ref|YP_001565500.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160365502|gb|ABX37115.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 320

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 61/294 (20%), Positives = 126/294 (42%), Gaps = 15/294 (5%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            +    +  +  L +F  +       +  S   ++LIY + A  L++++G  G+++L   
Sbjct: 12  ARFFWTVLALLALAVFPLVAPALGLDFYISFVRRVLIYALAATSLNLILGYGGMVALGHA 71

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +  GAY+  IL      S  +  P +A+++G      G  SL+ RG Y  + TL  ++
Sbjct: 72  AFFGAGAYAVGILAMNGVTSALVAWPAAALLAGLLAAATGAVSLRTRGVYFIMITLAFAQ 131

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +   I I  +                       +L      P   + +++  YYV+L + 
Sbjct: 132 MLFYIFISLRQYGG---------------EDGLNLPGHSVLPGLDLGHDVSFYYVVLALF 176

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +  ++   L  +    A + +R+N+    SL   +   KL+AF +S A  G+AGA  A 
Sbjct: 177 AVLMAVFGRLVDSRFGKALQGVRENESRMESLGYPVYRIKLAAFVLSGAVAGLAGALLAN 236

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
               ISP +  ++++  ++ +V++GG+           +++ + E+      Y+
Sbjct: 237 HNLFISPSLMHWTQSANLLIMVLVGGVGLRWGGVAGAVVMLTLEEVLRMWTEYW 290


>gi|84500501|ref|ZP_00998750.1| possible branched-chain amino acid ABC transporter, permease
           protein [Oceanicola batsensis HTCC2597]
 gi|84391454|gb|EAQ03786.1| possible branched-chain amino acid ABC transporter, permease
           protein [Oceanicola batsensis HTCC2597]
          Length = 422

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/330 (13%), Positives = 115/330 (34%), Gaps = 35/330 (10%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  + + L +  T   + + ++  Q+ I ++FA   ++++G  G+LS    + + +G Y
Sbjct: 26  ILIFVAIILAIPMTDPSRTMLTLIHQMAINIVFALAYNMLLGKGGMLSFGHAVYFGLGGY 85

Query: 80  SYVILGSR--------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             + + +              + L  +  +  G    ++G  S +  G   A+ +L ++E
Sbjct: 86  FCMHVMNWIEEGSGIWGSYPTFFLPVMGFVAGGLAAAVIGSFSCRRAGTTFAMISLGVAE 145

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +  +    +  +  G+ GI                +         +     +Y+ +    
Sbjct: 146 LVFSGAFMFDSLFGGEQGIN------------GDRMNGPEVFGLSMGPMQDIYWFMAFWT 193

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +    +    RT +       RDN +    +       +   F +S AF G+AG   A 
Sbjct: 194 VVGIVAMYAFTRTPLGRLSEATRDNPQRVQFIGYNPTRVRWLVFTISGAFAGLAGGMSAV 253

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           + +  +P+      +  V+ +  +GG+T  +       +L  +  +       +      
Sbjct: 254 NYEIFTPEALSLIPSGFVLIMAYVGGITYFAGPIMGAILLTYMSSMMSDFTEAW------ 307

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                       + +   ++++     +  
Sbjct: 308 ---------LLYLGLMFVIIVMYAPRGIAG 328


>gi|311107983|ref|YP_003980836.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310762672|gb|ADP18121.1| inner-membrane translocator 47 [Achromobacter xylosoxidans A8]
          Length = 629

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 58/304 (19%), Positives = 124/304 (40%), Gaps = 33/304 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y+  +  +ILI  +FA  L  + G  G+ S      + +GAY   +L     + +   
Sbjct: 343 SPYLGILLTEILIAALFAASLHFLTGLAGMTSFGHAAWFGLGAYGAALLLKLAAVPMEAA 402

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + +    +    ++ G   ++  G YLA+ TL +++I   +  +W  +T G  G      
Sbjct: 403 LLLGPFAAALGALLFGWFCVRLSGVYLAMLTLAVAQILWALAYQWDDVTGGSNG------ 456

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                           +PS+++    + YY+ L +C    + +  L  + +  A R +RD
Sbjct: 457 ------------LIGLWPSAWLTQGPWFYYLTLALCVAGIAWLRRLAFSPLGYALRGVRD 504

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +     +L       + + F  +S   G+AG+ +A S+  I+PD    S ++  + +V+L
Sbjct: 505 SSLRAAALGMDTRRVQWAGFVAASFAAGLAGSLYAFSKGSIAPDTLAVSRSVDGLVMVLL 564

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ +L+      A    + ++      Y+                 ++ +A+  +++  
Sbjct: 565 GGLQTLAGPLVGAASYTWLQDVAARSTEYWHA---------------VLGLAILALVMAF 609

Query: 336 SHSL 339
              L
Sbjct: 610 PEGL 613



 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 87/291 (29%), Gaps = 13/291 (4%)

Query: 51  MFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIM 110
           + A GLS++ G   +++      Y +G Y        +G        +         +  
Sbjct: 22  LVAAGLSLIFGVTRVVNFAHGSFYMLGIYLAWTFTGYFGDGAGYWAGLLLAALATGLIGA 81

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
               L  R  Y A     +   F  +LI             +A          R+     
Sbjct: 82  AAEWLVLRRLYQAPELFQLLATFALVLIIGDA--------ALAIWGPEDLFAARAPGLSG 133

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                   Y  +   ++     +   + L L RT      R   +N+K   +L     + 
Sbjct: 134 AVQILGRRYPEYDLLLIAAGPVVLGLLWLLLMRTRWGRLLRAAAENRKMLAALGVNQAWL 193

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
             SAF + +   G+ GA  A                     +V++GG+ S+     A  +
Sbjct: 194 FTSAFTLGAFLAGLGGALAAPRVPA--TLGLDLEIIASAFVVVVVGGLGSIPGAFLAALL 251

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +  V  L   +          +  + +          + +V+++R   LL 
Sbjct: 252 ICSVKALFVFLGQVQIG---PWLFNLSKLTLLAEFAVMAVVLVVRPWGLLG 299


>gi|126668637|ref|ZP_01739589.1| ABC-type branched-chain amino acid transport system, permease
           component [Marinobacter sp. ELB17]
 gi|126626896|gb|EAZ97541.1| ABC-type branched-chain amino acid transport system, permease
           component [Marinobacter sp. ELB17]
          Length = 374

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 49/352 (13%), Positives = 100/352 (28%), Gaps = 41/352 (11%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
              L+ V    +      A     Y  ++  + L Y + A  + +V G LG+LSL     
Sbjct: 20  FAALVIVTVLHVFTPQDSALHVSAYTVTLLGKYLCYALLAVAVDLVWGYLGILSLGHGAF 79

Query: 74  YAIGAYSYVILGSRYG-----------------------LSIWLLIPVSAMISGACGMIM 110
           +A+G Y+  +   R                            WL   ++        +  
Sbjct: 80  FALGGYAMGMYLMRQIGDRGTYGDPVLPDFMVFLNWQELPWYWLGFDMAWFAFAMVLLAP 139

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
           GL +L F           +        + +  +       +  +  +     +       
Sbjct: 140 GLLALVFGFLAFRSRVTGVYLSIITQALTFALM----LAFFRNEMGFGGNNGLTDFRDIL 195

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
            F        + ++        +   I   +  + +       RD +     L   +   
Sbjct: 196 GFNLRTDATRLGLFLATGVALAIGFVICRGIVTSKLGRVAVACRDAEARTRFLGYRVERV 255

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           +L  F +S+   G+AGA +      I+P  F    +I ++  V LGG  +L        +
Sbjct: 256 QLFVFVISAMLAGVAGALYVPQVGIINPSEFSPLFSIEIVVWVALGGRATLYGAVIGAVL 315

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +     +  G+                      +     LV +     +  L
Sbjct: 316 VNYAKTVLTGV--------------MPDAWLFALGGLFVLVTVFLPKGIAGL 353


>gi|187929778|ref|YP_001900265.1| inner-membrane translocator [Ralstonia pickettii 12J]
 gi|187726668|gb|ACD27833.1| inner-membrane translocator [Ralstonia pickettii 12J]
          Length = 311

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 98/305 (32%), Gaps = 6/305 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   IY + A G ++V G LG+++        +GA S +   +        L   
Sbjct: 8   IVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMVGAMSALTAINFLQKYFPNLPDW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      +     + +  + +A   L  +     ++         +    +      
Sbjct: 68  LTLVFALLFAMPVCAIVAYTIERVAYRPLRNAPRLAPLITAIGVSIVLQTLAMMIWSRNP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L              S+          ++L    +   +IL + RT +  A R   +NQ+
Sbjct: 128 LTFPQLLPSSPIDIGSTGATITGKEIVIILVSILVMVGLILLVNRTKLGRAMRATAENQR 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +     F   + F + +A   +AG   A +       M  F   +   +  +LGG+
Sbjct: 188 VAGLMGVNPNFVISATFMIGAAMAAVAGVMMATNYGNAHFYM-GFIPGLKAFTAAVLGGI 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  L  G        +       +        I L  V+L R   
Sbjct: 247 GNLAGAMVGGMLLGLIEALGAGYIGDLTGGVFG-----SNYQDVFAFIVLIGVLLFRPSG 301

Query: 339 LLRLR 343
           ++  R
Sbjct: 302 IMGER 306


>gi|138896566|ref|YP_001127019.1| branched chain amino acid ABC transporter permease [Geobacillus
           thermodenitrificans NG80-2]
 gi|196249269|ref|ZP_03147967.1| inner-membrane translocator [Geobacillus sp. G11MC16]
 gi|134268079|gb|ABO68274.1| Branched-chain amino acid ABC transporter (permease) [Geobacillus
           thermodenitrificans NG80-2]
 gi|196211026|gb|EDY05787.1| inner-membrane translocator [Geobacillus sp. G11MC16]
          Length = 292

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 46/288 (15%), Positives = 97/288 (33%), Gaps = 11/288 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      + IG++      +  G+  +  + +
Sbjct: 7   LVNGISLGSIYALIALGYTMVYGIVRLINFAHGDVFMIGSFVGFYAVTMLGVGFFPALLL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +    GM +   + K   +   IA LI +     ++        G            
Sbjct: 67  AMAVCAVLGMTIERIAYKPLRNATRIAVLITAIGVSLLIEYVMIYLRGAQ---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+         V+      ++L     L   +   + RT I  A R +  + +
Sbjct: 117 PEAYPGTLLPKQNLELFGVVISSQSLFILGTSLVLMILLQFIVHRTKIGKAMRAVSHDAE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +     + FA+ SA  G AG  F     +I P M      +      +LGG+
Sbjct: 177 AARLMGINVDNTISATFAIGSALAGAAGVIFGIYYTKIDPLM-GILPGLKAFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             +        +L  +  L  G+ +  +   + F     +       +
Sbjct: 236 GIIPGAMVGGLLLGVIESLVSGLGYSLWRDGVAFIILILILIFRPAGL 283


>gi|148508236|gb|ABQ76023.1| ABC-type branched-chain amino acid transport system, permease
           protein II [uncultured haloarchaeon]
          Length = 477

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 70/397 (17%), Positives = 132/397 (33%), Gaps = 62/397 (15%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQ-ILIYVMFAWGLSIVVGSLGLLSLNCV 71
             L    + Y L+      + + Q    ++    I ++ M A  L++  G  GL ++  V
Sbjct: 24  ATLAATYLAYVLIGIGLGYSLRGQLNTIAVLTFYIGVFAMLALALNLHWGYTGLFNIGIV 83

Query: 72  IAYAIGAYSYVILGSRYGL------------SIWLLIPVSAMISGACGMIMGLPSLKFRG 119
              A+G Y   ++                   + + I    + +   G+++ LP+L+ R 
Sbjct: 84  GFMAVGIYVMALVSKPVYQAGGASQVGGLGLPVIIGIIAGMIAASLLGLLIALPALRLRA 143

Query: 120 DYLAIATLIMSEIFQNILI-----------KWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
           DYLAI T+ MSEI +   +           +      G   I        L  +   L  
Sbjct: 144 DYLAIVTIAMSEIVRFSFLSGQLQQFNLAGRRVGFGGGSGLILDYTDPLELFFSFFGLWD 203

Query: 169 FFRFPSS-----------FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +                 V+  +    VLL    L   ++     +      + IR+++
Sbjct: 204 AYLGLVETFGIIIPNNPKPVVDGLVYGAVLLSFVGLYFWLLKRTGESPFGRVLKAIREDE 263

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +A  SL       K+ AF +  A +G+AG  +      ++P+ F+      V   +I+GG
Sbjct: 264 EAASSLGKDTNGFKIKAFMLGCALMGLAGILWFMRSGAVTPNTFRPRITFFVWIALIIGG 323

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN-------------------- 317
             S +      AI   ++           +++L    S +                    
Sbjct: 324 AGSNTGSVLGGAIFAALLYQGPRYLKNLIDTVLPSASSPSSFGPAIAPLISNLDITPLLF 383

Query: 318 -------MRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                        M + L  ++  R   LL  RT + 
Sbjct: 384 YTIDNIRQLQLVFMGVVLIWLMHNRPEGLLGHRTETA 420


>gi|288931422|ref|YP_003435482.1| branched-chain amino acid ABC transporter permease [Ferroglobus
           placidus DSM 10642]
 gi|288893670|gb|ADC65207.1| inner-membrane translocator [Ferroglobus placidus DSM 10642]
          Length = 324

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 125/335 (37%), Gaps = 40/335 (11%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +    L+        + +    +   + ++++      I+VG  G ++L   +   +GA
Sbjct: 8   LIGLIGLIVALTLPFYTPEGYLFLFGMLFLFLILVLSWDIIVGYTGQVNLGHTVFVGLGA 67

Query: 79  YSYVIL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           Y+  +L              S    + +L I +  +++   G  +G  +L+ +G Y A+ 
Sbjct: 68  YTAALLQVPSRFESFSSALASMPPQNQFLSILIGGIVAALFGAAIGFVTLRLKGYYFALV 127

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           T I+  +F   +  +  +  G+ G  +                      +     +  YY
Sbjct: 128 TAILPLVFIQTVYVFSDVFGGEEGFSI------------------GLERALSQSPVVRYY 169

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           V   +  L    + ++ ++ +   +  +RD+++   +L   ++  K+ AF +SS F G+A
Sbjct: 170 VAFAVFLLCFLAMRYIVKSDLGYRFMAVRDDEELAEALGIDVVKYKVLAFTISSFFAGVA 229

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA     R  + PD++     +++I   +LGG+ +L        I+  +  L        
Sbjct: 230 GATIVLYRITVGPDLYDIPLMLMIILSAVLGGLGTLYGPLIGGIIVYLLKNLF------- 282

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                       +    ++   L  V L+    L 
Sbjct: 283 --LKTMIPQGAFVNDEIVLYAILIAVALLSPEGLW 315


>gi|254453080|ref|ZP_05066517.1| urea ABC transporter, permease protein UrtC [Octadecabacter
           antarcticus 238]
 gi|198267486|gb|EDY91756.1| urea ABC transporter, permease protein UrtC [Octadecabacter
           antarcticus 238]
          Length = 368

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 51/340 (15%), Positives = 105/340 (30%), Gaps = 26/340 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  L V++ ++LF F        Y  ++  + L   + +  L++  G+ G+L+L     +
Sbjct: 9   LVALLVLFIIVLFGFPTFLGFDGYELNLYSRYLSLGIVSMALALSWGTTGILNLGQAATF 68

Query: 75  AIGAYSYVIL------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
            IG+Y   +              +W  + V          +            L    + 
Sbjct: 69  GIGSYIMAMHLKIKGSADLPDFMVWNNVDVLPWFWVPFHSLSFTLVAGLLIPALVGGLIG 128

Query: 129 MSEI------FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           +             +I    +   +  +            +  L     F  +   Y I 
Sbjct: 129 VFMFRARISGVFVAVITLAFLVAFQLLVVNYQGYTGGQNGLTGLAPLTLFGWTVDTYSIQ 188

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            YY++ G    +  I L+L  +      R IR++          +   +   F +S+A  
Sbjct: 189 FYYLVAGCLIAALVIGLYLVHSKFGLILRAIREDANRTRFFGYNVASYETVIFCISAALA 248

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G +G  +       SP     S ++ ++    +GG  S+   A    I+  +      + 
Sbjct: 249 GWSGMLYTLVLQFASPTYMSVSFSLGIVIWCAVGGRNSVIAAAVGAIIVNILQGKLSDV- 307

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                        +      ++     LV+L     L  L
Sbjct: 308 -------------YVEGWHMMLGATFVLVVLFMPRGLHGL 334


>gi|187479501|ref|YP_787526.1| ABC transporter permease [Bordetella avium 197N]
 gi|115424088|emb|CAJ50641.1| ABC-transporter, permease protein [Bordetella avium 197N]
          Length = 317

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 61/279 (21%), Positives = 123/279 (44%), Gaps = 15/279 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           F          +  S   ++LIY + A  L++V+G  G+++L     +  GAY+  IL S
Sbjct: 18  FPLFAPAMGLDFYISFVRRVLIYALAATSLNLVLGYGGMVALGHAAFFGAGAYTVGILAS 77

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
               S+  + P + +++G    ++G  SL+ RG Y  + TL  +++   I I  +     
Sbjct: 78  GGVTSVLAVWPAAVLLAGVLAWVIGAISLRTRGVYFIMITLAFAQMVYFIFISLRQYGG- 136

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                             +L  +   P   +  ++  YYV+L +  +   +   L  +  
Sbjct: 137 --------------EDGLNLPGYSTLPGLDLGNDVTFYYVVLAVFVVVMYVFNRLVASRY 182

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A + +R+N+    +L   +   KL+AF +S A  G+AGA  A     ISP +  ++++
Sbjct: 183 GEALQGVRENESRMEALGYPVYRIKLTAFVLSGAAAGLAGALLANHNLFISPSLMHWTQS 242

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
             ++ +V++GG+          ++++ + EL      Y+
Sbjct: 243 ANLLIMVLVGGIGLRYGGVVGASVMLLLEELLRQWTEYW 281


>gi|160939124|ref|ZP_02086475.1| hypothetical protein CLOBOL_04018 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438087|gb|EDP15847.1| hypothetical protein CLOBOL_04018 [Clostridium bolteae ATCC
           BAA-613]
          Length = 293

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 97/307 (31%), Gaps = 23/307 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      +Y + A G ++V G   +L+        IG+Y   +  S  GL     +
Sbjct: 5   NYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGSYVVFVTVSTMGLPPMAGV 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++  +    GM +   + K       +A LI +     +L     +  G         +
Sbjct: 65  LLAVAVCTLLGMTIERIAYKPLRGASPLAVLITAIGVSYLLQNVALLIFGADTKSFTSVV 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +             +         +L    +   +  ++ ++    A   + ++
Sbjct: 125 TLPAIKLAG---------GEMTITGETIVTILSCIVIMIGLTAFINKSKAGQAMLAVSED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ SA   +AG    ++   ++P        I      + G
Sbjct: 176 RGAATLMGINVNGTIALTFAIGSALAAIAGVLLCSAYPSLTPYT-GSMPGIKAFVAAVFG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        +L  +  L         +  + F               L +V+L++ 
Sbjct: 235 GIGSIPGAFIGGILLGVIEILSKAYISSQMSDAIVFS-------------VLIIVLLVKP 281

Query: 337 HSLLRLR 343
             +L  +
Sbjct: 282 TGILGKK 288


>gi|323526785|ref|YP_004228938.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
 gi|323383787|gb|ADX55878.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
          Length = 440

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 105/312 (33%), Gaps = 27/312 (8%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
           Q ++ +   Q    ++FA   ++++G  GLLS         GA     + +R G+ + LL
Sbjct: 49  QSWLLAYLAQTATMIVFALSYNLLLGETGLLSFGHAAYAGFGALIAAQVFNRAGVPLALL 108

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
             +  + +  CG ++G  + +  G   A+ TL + E+             G+AG+ +   
Sbjct: 109 PLIGGIGAALCGALLGFIATRRAGTAFAMITLGIGELVSAAAWSLPDWFGGEAGVAI--- 165

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                           F +         Y ++   C L+++ +  L RT        +RD
Sbjct: 166 ---------DRASGPTFGAWTFGPAREAYTLIALWCLLASAAMFALSRTPFMRLANAVRD 216

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N     ++       +     +S+ F G+AG     + + +S +      +  V+   ++
Sbjct: 217 NPARAAAIGCYPRRIRHGVVVMSAFFAGVAGTLALINVELVSTESVSMVRSGSVLIATVI 276

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  +         +L         +   +                  + +   ++++  
Sbjct: 277 GGTGAFFGPVAGAVVLTFFSVAVASVTRAW---------------LFYLGLLFIVIVVTS 321

Query: 336 SHSLLRLRTPSN 347
              L        
Sbjct: 322 PDGLAGFAERHA 333


>gi|261366988|ref|ZP_05979871.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Subdoligranulum variabile DSM 15176]
 gi|282571105|gb|EFB76640.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Subdoligranulum variabile DSM 15176]
          Length = 297

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 109/307 (35%), Gaps = 19/307 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      +Y + A G ++V G   +L+        IG+Y         G++  L I
Sbjct: 5   SYLINGISLGSVYALIALGYTMVYGIAKMLNFAHGDVIMIGSYVVFFTFGTSGMNPILSI 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +S ++    G+++   + +   +  ++A LI +     +L +   +T   +       +
Sbjct: 65  LLSMVVCTVLGVVIERVAYRPLREAPSLAVLITAIGVSYLLQQVAQLTWSSSPKSFISVI 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
             +       ++        +         ++    + A +I ++  T+  +A   + ++
Sbjct: 125 SGI-----PFLQPISLFDGQLTISAETIVTIVVCIVIMAVLIWFVNNTSAGHAMLAVSED 179

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ SA   +AGA   +S   + P        I      + G
Sbjct: 180 RGAAQLMGVNVNATISLTFAIGSALAAVAGALLCSSYPTLQPTT-GAMPGIKAFVAAVFG 238

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        +L  +  L         +               ++ + L +V++++ 
Sbjct: 239 GIGSIPGAFLGGILLGVIENLSKAYISTQLSDA-------------IVFLVLIVVLIVKP 285

Query: 337 HSLLRLR 343
             LL  +
Sbjct: 286 TGLLGKK 292


>gi|90414543|ref|ZP_01222517.1| ABC transporter permease protein [Photobacterium profundum 3TCK]
 gi|90324350|gb|EAS40916.1| ABC transporter permease protein [Photobacterium profundum 3TCK]
          Length = 382

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 49/344 (14%), Positives = 99/344 (28%), Gaps = 33/344 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
            A+    LL         + Y  S+  + L Y + A  + +V G LG+LSL     +A+G
Sbjct: 46  FAIPALNLLLPQGHFFHIETYTISLLGKYLTYALLAMAVDLVWGYLGILSLGHGAFFALG 105

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  +   R      +              +  LP      D    A L++  +   + 
Sbjct: 106 GYAMGMYLMRQIGDRGVYGNAELPDFMVFLNLQELPWFWQGFDMFWFACLMVVLVPGLLA 165

Query: 138 IKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
             +  +                          +  +  +     +        +      
Sbjct: 166 WCFGYLAFRSRVSGVYLSIMTQALTFALMLAFFRNEMGFGGNNGLTDFKDILGYSLQADS 225

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
            +I ++   +    L   +   +  + +      +RD +     +   +   K+  F +S
Sbjct: 226 TKITLFVASVIALILGYLVCRIVISSRLGRVAIAVRDAESRVRFMGYNVDNIKVCIFILS 285

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           +   G+AGA +      I+P  F    +I ++  V LGG  +L         +       
Sbjct: 286 AVLAGIAGALYVPQVGIINPGEFAPLNSIEIVVWVALGGRATLFGAIIGAVTINYAKSW- 344

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                        F   F       +     L  L     +  L
Sbjct: 345 -------------FTIEFPEVWLFALGSMFVLATLFLPKGITGL 375


>gi|297538551|ref|YP_003674320.1| urea ABC transporter permease UrtC [Methylotenera sp. 301]
 gi|297257898|gb|ADI29743.1| urea ABC transporter, permease protein UrtC [Methylotenera sp. 301]
          Length = 397

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 45/348 (12%), Positives = 97/348 (27%), Gaps = 36/348 (10%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L+ +     +           +  ++  + L Y   A  L ++ G+ G+LSL   I + 
Sbjct: 14  GLVGLAVLAAIIFVALPLGVDIFRLNLVGKYLTYAFVAVSLVLLWGNGGILSLGQGIFFG 73

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG-----LPSLKFRGDYLAIATLIMS 130
           +G Y   +               +                      F+   L I  ++  
Sbjct: 74  LGGYGMAMFMKLEASDPITTKIQTTPGIPDFMDWNQITSLPWFWEPFKSLPLTILIILTI 133

Query: 131 EIFQNILIKWKPITNGKAGIYVA-----------------DRLYFLGTTVRSLIRFFRFP 173
                 LI +        G+Y A                          +  L   + + 
Sbjct: 134 PALFAYLIGFAMFKRRVGGVYFAIITQAIALILSILIVGQQGFTGGVNGITDLKTVWGWD 193

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
           +     +  +YY+   + F +  +  ++  +        +RD ++        +   K+ 
Sbjct: 194 TRNDSAKYILYYLNGFLLFGAILLSKYVLNSKFGMLLLAMRDKEERVRFSGYDVSNFKIF 253

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            F +++    + GA F      +SP       +I ++    +GG  SL      T  +  
Sbjct: 254 IFCLAAMISAVGGAMFTLQVGFMSPSFVGIVPSIEMVIFCAVGGRASLIGAVYGTLFVNF 313

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                             F  S+      +M      V++     L  
Sbjct: 314 GKTF--------------FSESYPELWLFIMGGLFIAVVMFFPDGLAG 347


>gi|229591289|ref|YP_002873408.1| putative branched-chain amino acid ABC transporter permease
           [Pseudomonas fluorescens SBW25]
 gi|229363155|emb|CAY50195.1| putative branched-chain amino acid ABC transporter permease
           [Pseudomonas fluorescens SBW25]
          Length = 349

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 66/330 (20%), Positives = 132/330 (40%), Gaps = 16/330 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    +    L F+ +    +  +++++ I  L+  +   GL+++ G  G  S+      
Sbjct: 19  IPWALIGLLALAFIAVPLWGNDYWLNAILIPFLVLSLAGLGLNLLTGYTGQTSVGAAGFM 78

Query: 75  AIGAY-SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           A+GA+ +Y  L     L + + +    +IS   G++ GLPS + +G YL + TL      
Sbjct: 79  AVGAFATYGFLLRLPELGLPVALLGGGVISALVGLLFGLPSSRIKGFYLMVTTLAAQFFL 138

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           + + +K+    N  +   ++     L                 +   +  Y + L    L
Sbjct: 139 EWLFVKFPWFYNYGSSGTISAPKLALFGH-------------DLNTPLGRYLLTLVTVLL 185

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-AS 252
                + L R+ +   W  IRD   A   +   ++  K  AFAVSS ++G+AGA +A A 
Sbjct: 186 LTWTAINLVRSQVGRNWMAIRDMDTAAAVVGIPVVRYKRLAFAVSSFYLGIAGALWAFAY 245

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
               S   F  + +  ++ I+I+GGM S++      A +  +           F   +  
Sbjct: 246 LGTASASSFDINRSFQILFIIIIGGMGSIAGNFVGAAFISLLPIFLSHAGQALFGGAVDA 305

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                     +  + + + ++     L+RL
Sbjct: 306 G-QLQNLQKIIFGVLIIVFLIKEPEGLIRL 334


>gi|22126878|ref|NP_670301.1| branched chain inner membrane ABC transporter permease [Yersinia
           pestis KIM 10]
 gi|45440786|ref|NP_992325.1| branched-chain amino acid ABC transporter permease [Yersinia pestis
           biovar Microtus str. 91001]
 gi|21959912|gb|AAM86552.1|AE013901_13 putative branched chain inner membrane permease of ABC transporter
           [Yersinia pestis KIM 10]
 gi|45435644|gb|AAS61202.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia pestis biovar Microtus str. 91001]
          Length = 538

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 81/288 (28%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++ S +       + +  +I+      +       
Sbjct: 265 ITYGLLGVINMAHGEMLMLGAYSAYLVQSLFQQFAPHWLALYPLIALPVAFFITAGIGMA 324

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W        GI +      L     + +         +
Sbjct: 325 LER--TVIRHLYGRPLETLLATWGISLMLIQGIRMLFGPQNLEVANPAWLSGGVQVLPNL 382

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+  +  +     L L +T +    R +  N+              + AF +
Sbjct: 383 VLPWNRIAVIAFVIIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGRVDMLAFGL 442

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+LGG+  L+    A   L  + ++
Sbjct: 443 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 500

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 501 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 535


>gi|94311415|ref|YP_584625.1| inner-membrane translocator [Cupriavidus metallidurans CH34]
 gi|93355267|gb|ABF09356.1| leucine/isoleucine/valine transporter subunit, membrane component
           of ABC superfamily [Cupriavidus metallidurans CH34]
          Length = 308

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 91/297 (30%), Gaps = 16/297 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--------YVILGSRYGL 90
           + +      IY + A G ++V G +G+++      Y IGAY             G    L
Sbjct: 12  LVNGLTLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGAQAGYPLPL 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS  ++G  G  +   + +       +  LI +      L  +  I  G    
Sbjct: 72  VLGAALIVSVAVTGCYGYAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +   I F       V        ++     L   + L++  + +  A 
Sbjct: 129 ----RDVSVPILISGAIEFQMGGDFTVTVPYSRLLIVGVTLVLMIVLTLFIGHSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ +    L           F + +    + G     +  +++     F   I   
Sbjct: 185 RACAEDMRMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLN-PFIGFIAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  +LGG+ S+        +L        G     +  ++ F     +       + 
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPAEYKDVVAFGLLVLVLLFRPTGLL 300


>gi|229029665|ref|ZP_04185741.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus AH1271]
 gi|228731669|gb|EEL82575.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus AH1271]
          Length = 317

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 58/331 (17%), Positives = 130/331 (39%), Gaps = 31/331 (9%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY   +
Sbjct: 2   LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61

Query: 84  LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           L  R      + ++ +  + +IS     I+GL SL+ +  + A+ TL +S++F  +  KW
Sbjct: 62  LFDRQGVSITNFFIGLVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T+G  G        F                         YYV L    +   ++  
Sbjct: 122 RGLTHGGDGFTFGVPDLFRDRF-------------------TFYYVTLICLIVIFILLRL 162

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++  +
Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVATISGGLFVITLRFVNTTV 222

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F     +  + + ++GG+ +L            +       +  Y+ S L        R 
Sbjct: 223 FSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATAYPIFERW 273

Query: 321 TTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           T ++ +   +V+L+    L+        +++
Sbjct: 274 TIILGLLYIIVLLVFPKGLVGTIKRLKNVKQ 304


>gi|238788788|ref|ZP_04632579.1| Branched-chain amino acid transport system, permease component
           [Yersinia frederiksenii ATCC 33641]
 gi|238723093|gb|EEQ14742.1| Branched-chain amino acid transport system, permease component
           [Yersinia frederiksenii ATCC 33641]
          Length = 533

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 80/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++ S +       + +  +I+      +       
Sbjct: 260 ITYGLLGVINMAHGEMLMLGAYSAYLVQSLFQHVAPHWLALYPLIALPVAFFITAGIGMA 319

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      L     + +         +
Sbjct: 320 LER--TVIRHLYGRPLETLLATWGISLMLIQSVRMIFGAQNLEVANPAWLSGGVQILPSL 377

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+  +  +     L L +T +    R +  N+              + AF +
Sbjct: 378 VLPWNRIAVIAFVVIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGRVDMLAFGL 437

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+LGG+  L+    A   L  + ++
Sbjct: 438 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 495

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 496 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 530


>gi|237745225|ref|ZP_04575706.1| branched-chain amino acid transport system permease livH
           [Fusobacterium sp. 7_1]
 gi|256026672|ref|ZP_05440506.1| branched chain amino acid ABC transporter permease [Fusobacterium
           sp. D11]
 gi|289764669|ref|ZP_06524047.1| branched-chain amino acid transport system permease livH
           [Fusobacterium sp. D11]
 gi|229432454|gb|EEO42666.1| branched-chain amino acid transport system permease livH
           [Fusobacterium sp. 7_1]
 gi|289716224|gb|EFD80236.1| branched-chain amino acid transport system permease livH
           [Fusobacterium sp. D11]
          Length = 295

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 92/306 (30%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL---GSRYGLSIWLL 95
           I +      IY + + G ++V G   L++        IGAY+ +      +  GL +W+ 
Sbjct: 7   IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYTSLFSIPLFTSLGLPVWVT 66

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  + +I    G +    + +   +   I+ LI +      L                  
Sbjct: 67  VIPAIIICAIVGCLTERIAYRPLRNSPRISNLITAIGVSLFLENLFMKIFTPNTRSFPKI 126

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                 +  + I                   ++    LS  + L++++T    A      
Sbjct: 127 FNQAPISFGANIH----------INFGAVVTIVVTLILSIGLQLFMKKTKYGKAMIATSQ 176

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   +   +       FA+ S    +    + ++  +I P M      I      +L
Sbjct: 177 DYAASELVGINVDRTIQLTFAIGSGLAAVGSVLYVSAYPQIQPLM-GSMLGIKAFVAAVL 235

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  L        IL  V  L              F               L +V+L +
Sbjct: 236 GGIGILPGAVIGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIIVLLFK 282

Query: 336 SHSLLR 341
              +L 
Sbjct: 283 PTGILG 288


>gi|282857289|ref|ZP_06266527.1| inner-membrane translocator [Pyramidobacter piscolens W5455]
 gi|282584869|gb|EFB90199.1| inner-membrane translocator [Pyramidobacter piscolens W5455]
          Length = 334

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 93/307 (30%), Gaps = 14/307 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S       Y + A G ++V G L L++      + +     V + +     +++ +
Sbjct: 35  PYLLSGISVGGQYALIAIGYTMVYGILRLINFAHGDVFMVAGILMVYISAAVP--LYISV 92

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           PV  +++   G  +   + +       ++ +I +      L        G    +     
Sbjct: 93  PVVLILTAVIGFFIERIAYRPLRSAPRMSAMISAIGVSYTLQNLVLYITGGLNQFYPKVP 152

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           +                 S     +          FL+A +++ + RT +  A R +  +
Sbjct: 153 FISD----------SIRLSGATTTMVTVITPFLTIFLTALLVMLINRTKLGMAMRAVSKD 202

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    +   I     + F + S    +    +  +   +          +      + G
Sbjct: 203 FETSLLMGIKIDRVISATFVIGSFLAAVGSVLYFTNYSTVIQTS-GAMPGLKAFVAAVFG 261

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMR 335
           G+ S+        I+     L  G++   F    +                 L +++L++
Sbjct: 262 GIGSIPGAVIGAFIIGICENLIKGLDVILFRLGFIAKPLGLATFSDAFTFALLIVILLVK 321

Query: 336 SHSLLRL 342
              L   
Sbjct: 322 PTGLFGE 328


>gi|332085348|gb|EGI90520.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Shigella boydii 5216-82]
          Length = 509

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 95/303 (31%), Gaps = 16/303 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F        +  M   L  
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSFALLILALLSAAMFFVLAG 303

Query: 331 VIL 333
           V +
Sbjct: 304 VFM 306


>gi|237731475|ref|ZP_04561956.1| inner-membrane translocator [Citrobacter sp. 30_2]
 gi|226907014|gb|EEH92932.1| inner-membrane translocator [Citrobacter sp. 30_2]
          Length = 357

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 52/333 (15%), Positives = 98/333 (29%), Gaps = 27/333 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L L           +  ++  +IL Y + A  L +V G  G+LSL   I +A+G Y+  
Sbjct: 33  FLALLPAEHPLAISVWTLTLAGKILCYAIVAVALDLVWGYAGMLSLGHGIFFALGGYAMG 92

Query: 83  IL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
           +               S    S                +++ L        +   A    
Sbjct: 93  MYLMRQASGEGLPAFMSFLSWSELPWFWWGTQHFLWAMLLVVLVPGLLALVFGWFAFRSK 152

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            +     ++       G    +  +  +              FP +     I ++   + 
Sbjct: 153 IKGVYFSIMTQALTFAGMLLFFRNETGFGGNNGFTGFTTILGFPVTATSTRIALFLATVM 212

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  + L L R+        +RD +             KL  + +S+   G+AGA +
Sbjct: 213 LLVLAIWLGLALARSKFGRILTAVRDAENRLMFCGYDPKGFKLLVWTLSAVLCGLAGALY 272

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                 I+P     + +I     V LGG  +L        ++ G   L            
Sbjct: 273 VPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVFGAVLVNGAKSL------------ 320

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             F           + +    V L     ++ L
Sbjct: 321 --FTVIMPEYWQLFLGLIFIGVTLFLPRGVIGL 351


>gi|328950534|ref|YP_004367869.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
 gi|328450858|gb|AEB11759.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
          Length = 452

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 51/314 (16%), Positives = 102/314 (32%), Gaps = 17/314 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              L    S   + S    + I+ + A  L+++ G LG+LSL       IG Y   +L  
Sbjct: 20  IYILTQLPSAGGLVSALTLVFIWGIAAISLNLINGQLGILSLGHHGFMLIGGYVTALLVL 79

Query: 87  RYGLSIWL----------------LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                                          +      +     +       A + +   
Sbjct: 80  PEQERSPFRTRLLSEWARENLDLDKWLRGLGLDFLANSMDAKFIIALLIAGAAASLVGFI 139

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             F ++ +K   +     G     RL      V             +  +    +    +
Sbjct: 140 VGFPSLRLKGDYLAIVTFGFGEIIRLLPSTPEVARFTNGP-LGIKGIPADAGSIWWAFTV 198

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L+      L+ ++   A+  IR+++ A  ++   + + K+ AF +S+ F G+AG  +A
Sbjct: 199 FVLTIFFFSRLKYSSYGRAFEGIREDEIAAEAMGVNLAYHKVLAFTISAFFAGVAGGMYA 258

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           +    +    F F     ++  + LGG+ S++     TAI++ V      +   Y  S  
Sbjct: 259 SYLQSVDTQTFNFFVTFFLLVAISLGGLGSITGAILGTAIVVLVRIYGGFLEQPYPLSYA 318

Query: 311 KFDCSFNMRHTTLM 324
            +     M      
Sbjct: 319 FYTLGGLMLLAFGF 332


>gi|260495472|ref|ZP_05815598.1| urea ABC transporter, permease UrtB [Fusobacterium sp. 3_1_33]
 gi|260197009|gb|EEW94530.1| urea ABC transporter, permease UrtB [Fusobacterium sp. 3_1_33]
          Length = 295

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 92/306 (30%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL---GSRYGLSIWLL 95
           I +      IY + + G ++V G   L++        IGAY+ +      +  GL +W+ 
Sbjct: 7   IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYTSLFSIPLFTSLGLPVWVT 66

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  + +I    G +    + +   +   I+ LI +      L                  
Sbjct: 67  VIPAIIICAIVGCLTERIAYRPLRNSPRISNLITAIGVSLFLENLFMKIFTPNTRSFPKI 126

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                 +  + I                   ++    LS  + L++++T    A      
Sbjct: 127 FNQAPISFGANIH----------INFGAVITIVVTLILSIGLQLFMKKTKYGKAMIATSQ 176

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   +   +       FA+ S    +    + ++  +I P M      I      +L
Sbjct: 177 DYAASELVGINVDRTIQLTFAIGSGLAAVGSVLYVSAYPQIQPLM-GSMLGIKAFVAAVL 235

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  L        IL  V  L              F               L +V+L +
Sbjct: 236 GGIGILPGAVIGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIIVLLFK 282

Query: 336 SHSLLR 341
              +L 
Sbjct: 283 PTGILG 288


>gi|171741089|ref|ZP_02916896.1| hypothetical protein BIFDEN_00155 [Bifidobacterium dentium ATCC
           27678]
 gi|283455533|ref|YP_003360097.1| branched-chain amino acid transporter permease [Bifidobacterium
           dentium Bd1]
 gi|306823419|ref|ZP_07456794.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Bifidobacterium dentium
           ATCC 27679]
 gi|171276703|gb|EDT44364.1| hypothetical protein BIFDEN_00155 [Bifidobacterium dentium ATCC
           27678]
 gi|283102167|gb|ADB09273.1| Branched-chain amino acid transport system permease protein
           [Bifidobacterium dentium Bd1]
 gi|304553126|gb|EFM41038.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Bifidobacterium dentium
           ATCC 27679]
          Length = 309

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 99/304 (32%), Gaps = 13/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A G ++V G + L++        +G+Y  ++          L   +
Sbjct: 13  IFNGLKIGSVYSLVALGYTMVYGIIRLINFAHGDFIMVGSYVLMLTI-----PFILACGL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A ++    +++ +                       ++         + G        +
Sbjct: 68  PAWLAVVPAILVCVAVGVIVEKAAYKPVREKGNNMTALITAIAMSLLLENGSQAIFGADY 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V ++I+        +  +      +L    +  ++ L++  T    A R + ++++
Sbjct: 128 QT--VPTVIQIPTLALGGLKIDGATILTVLLGLVIMVALQLFVTYTKQGKAMRAVSEDKE 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S    +A   +  S  ++S  M      +      +LGG+
Sbjct: 186 ASILMGINVNSTITLTFAIGSGLAAVASLMYCVSYPQVS-PMMGAMLGLKAFVAAVLGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  V  L           ++    S       ++   L +V+L++   
Sbjct: 245 GSIPGAMVGGLVIGVVESLTKAYIGTITAGVITSAFSDA-----IVFGILIIVLLVKPSG 299

Query: 339 LLRL 342
           L+  
Sbjct: 300 LMGE 303


>gi|309779309|ref|ZP_07674071.1| branched-chain amino acid ABC transporter, permease protein
           [Ralstonia sp. 5_7_47FAA]
 gi|308921867|gb|EFP67502.1| branched-chain amino acid ABC transporter, permease protein
           [Ralstonia sp. 5_7_47FAA]
          Length = 323

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 115/302 (38%), Gaps = 33/302 (10%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++  ++L+Y M     ++++G  GLLS    I + +G+Y+  I  ++  L + + + ++ 
Sbjct: 33  TLATEVLVYAMAVMACNVLLGYTGLLSFGQGIFFGLGSYAVGIGLTQLALPMPVALVLAV 92

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           ++      ++G  +++ RG Y  + TL  S++F  +      +T G  G+    R     
Sbjct: 93  VVGAVVAAVVGWFAIRQRGTYFVMLTLAFSQMFYFLAYTTPSLTGGDNGLLDIPRP---- 148

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                         +F       Y  +  +  +   ++  +  +        IRDN++  
Sbjct: 149 --------------AFAASPWAFYAFVAALFLVVFFLVQRVTESVFGRTLLAIRDNEERA 194

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++   +   KL AF +S A  G+AGA  A            +  + +++ + ++GG  +
Sbjct: 195 LAVGYNVRAFKLLAFVISGAVTGLAGALHAMLTGIAPLANIDYHVSEMILVMTVIGGTGN 254

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +       A  + + +    +   +                 L+   L  V L     L 
Sbjct: 255 VFASVLGAAFYVLLSDWLSSLWPRW---------------LMLLGFLLIAVSLFMQRGLF 299

Query: 341 RL 342
            L
Sbjct: 300 GL 301


>gi|258405260|ref|YP_003198002.1| inner-membrane translocator [Desulfohalobium retbaense DSM 5692]
 gi|257797487|gb|ACV68424.1| inner-membrane translocator [Desulfohalobium retbaense DSM 5692]
          Length = 286

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 88/303 (29%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +    Y + A G S++ G LGL++L     Y  GA+   I  +  GL + L +  
Sbjct: 6   IVNGIVAGSAYALVALGYSLIYGVLGLINLAQGEIYMAGAFGLWIAAAVLGLPLPLAVLF 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + S   G+ M     +       +  L+ +      L     +  G            
Sbjct: 66  GLLFSAVVGLSMERVVFRPLTGRHPLIPLLAAIGLSIFLQSVALLAFGPE---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        +    V        ++     L   +  ++  +    A + +  +++
Sbjct: 116 -TRPFPLEFEPQLWNLGPVTLSTLQLLLVTTALALMGGLFWYVHASRHGQALQAVAMDRE 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +          AF +     G AG   AA  +  +         +      +LGG 
Sbjct: 175 AARLVGIKPHQCVAQAFGIGGMLSGAAGMMMAAYYN-ATYPYMGVLPGLKGFCAAVLGGA 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL     L        F     F               L  ++L+R   
Sbjct: 234 GSIPGAILGGLILGLSENLGAAYIHSGFKDGYAF-------------AILIAILLLRPQG 280

Query: 339 LLR 341
           LL 
Sbjct: 281 LLG 283


>gi|218887694|ref|YP_002437015.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218758648|gb|ACL09547.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 302

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 95/299 (31%), Gaps = 17/299 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
             +  IY + A G ++V G + L++      Y +GA++ +I+    G+  +  + +  + 
Sbjct: 14  LTRGSIYALIALGYTMVYGIIELINFAHGEVYMMGAFTALIVAGALGIYGFPALAILIIA 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +    +      L                   + LI    ++       +  +       
Sbjct: 74  AVVAVIYCAAYGLTLEKIAYKPLRDA---PRLSPLISAIGMSIFLQNYVILAQTSDFMPF 130

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
              + +         I       +++      A++ L+++ T +  A R    N+K    
Sbjct: 131 PNLVPQPDFLEPIAHIMGASEVLIIVTSAISMAALTLFIKYTRMGKAMRATAQNRKMAML 190

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L           F + S+   + G   A+   +++     F   I   +  +LGG+ S+ 
Sbjct: 191 LGIDADKVISLTFVIGSSLAAVGGVLIASHVGQVNF-AIGFIAGIKAFTAAVLGGIGSIP 249

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  +L        G     +   L F               L L+++ R   +L 
Sbjct: 250 GAMLGGLVLGWCESFATGYISSDYEDALAF-------------ALLVLILIFRPSGILG 295


>gi|116248771|ref|YP_764612.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253421|emb|CAK11809.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 361

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 57/313 (18%), Positives = 115/313 (36%), Gaps = 19/313 (6%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                + +      IL  ++ A   +++ G  GL+S+   +    GAY+       +G+ 
Sbjct: 35  PFIVARGVIQDLFFILTMLVLAQNWNLLAGYAGLISVGQQVFVGFGAYTMFGCVILFGVD 94

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             + I ++ + S A  +     + +  G Y AI T +++E+ + +L +WK +  G     
Sbjct: 95  PVVAILIAGVFSVALAIPTAFFTFRLYGPYFAIGTWVVAEVVRLLLAQWKALGGGTG--T 152

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              R           +R      +    +   Y++ L +   +   I  L R+       
Sbjct: 153 SLPREATRDMMGVGAMRDLFGMKASEAGDALTYWLALILAVATIGFIYGLLRSKQGLGLA 212

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK--FSENIIV 269
            +RDN++A  +L       K   +  ++   G+AGA     + RISPD           V
Sbjct: 213 AVRDNEQAARALGVDARRMKTLVYLATAFMTGIAGALIYVQKARISPDAAFSVTDWTAYV 272

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           I IV++GG+ ++        I   +  L                      +  ++ +   
Sbjct: 273 IFIVVIGGIGTIEGPILGVIIFFLLQNLLADY---------------GSWYLLMLGLLGI 317

Query: 330 LVILMRSHSLLRL 342
            ++L+    L  L
Sbjct: 318 AIMLLAPRGLWGL 330


>gi|160897996|ref|YP_001563578.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160363580|gb|ABX35193.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 355

 Score = 83.8 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 52/325 (16%), Positives = 114/325 (35%), Gaps = 11/325 (3%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                     ++  ++LI+V+      +++G  G++S    + + IGAY   I  SR G 
Sbjct: 31  PFVFPGVKALNVAAKVLIFVVLVASFDLLLGYTGIVSFAHTMFFGIGAYGVAIASSRMGA 90

Query: 91  SIWLLIPVSAMISGACGMIMG---LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
               L            ++     L SL+ R  + A+ TL ++  FQ +  +    T G+
Sbjct: 91  GWGALALGLGAALLVSLLLSLAIGLFSLRVRAIFFAMITLAVAAAFQTLASQLSEWTGGE 150

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
            G+      +   +                   I  YY+L  +  +    +L +  +   
Sbjct: 151 DGLSFKLPEWLSPSFEPFENEVLGVLIDG---RIITYYLLFVLAVVLVLALLRIVNSPFG 207

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-ISPDMFKFSEN 266
              + IR+N+    ++   ++  +  +  +S+ F  +AGA  A             F   
Sbjct: 208 RVLQAIRENEFRAEAIGYRVVVYRTLSSVLSALFACVAGAMLALWLRYNGPDTSLSFEIM 267

Query: 267 IIVISIVILGGMTSLSKIAKATAILIG----VVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           +  + IV++GGM ++   A  + + +     + +L    +    +           R   
Sbjct: 268 MDCLLIVVIGGMGTIYGAAIGSVLFLIAQSYLQDLLRVASEAAHSLPWLAALLSPDRWLL 327

Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347
            + +   L +      ++     S 
Sbjct: 328 WLGVLFVLSVYYFPTGVVGRLRSSR 352


>gi|294499668|ref|YP_003563368.1| putative branched-chain amino acid ABC transporter permease
           [Bacillus megaterium QM B1551]
 gi|294349605|gb|ADE69934.1| putative branched-chain amino acid ABC transporter, permease
           protein [Bacillus megaterium QM B1551]
          Length = 328

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 92/315 (29%), Gaps = 18/315 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G ++V G L L++      +  GA+    +        W+    
Sbjct: 13  LIDGLTLGAVYAIIALGYTMVYGILELINFAHGEIFMSGAFIGTAILIGLTGVGWIAAFP 72

Query: 99  SAMI------------SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
           + +                   I  +     R     I  +    +   +    + IT  
Sbjct: 73  AVVTLILVLLITSVATGFLGMGIERVAYRPLRKSSKLITLITAIGMSFLLQDFVRFITEL 132

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
           K G Y+ +        V               +++    VLL    L   + +++ RT  
Sbjct: 133 KNGNYIVNTPALFSGKVSVSASSLSSLFDDATFKVTFIVVLLVAFCLMIGLEIFVNRTKW 192

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A R +  +      ++  +       F + SA  G  G  FA     I P    F   
Sbjct: 193 GMAMRAVAQDPDTASLMSINVNKVISLTFFIGSALGGATGVLFALHYGTIDPY-IGFILG 251

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           +   +  +LGG+ ++        +L  +             ++L                
Sbjct: 252 LKAFTAAVLGGIGNIRGAMFGGLMLGILEMFAAANLSTITGNVLG-----AEYKDVFAFA 306

Query: 327 ALFLVILMRSHSLLR 341
            L LV++ +   L  
Sbjct: 307 ILILVLIFKPEGLFG 321


>gi|51892754|ref|YP_075445.1| branched-chain amino acid ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
 gi|51856443|dbj|BAD40601.1| branched-chain amino acid ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
          Length = 332

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 71/322 (22%), Positives = 123/322 (38%), Gaps = 41/322 (12%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY--- 88
           A     Y   +    LI  + A GLS++ G  G  SL     Y +GAY    +   +   
Sbjct: 28  AGFIGIYWGQIMDLALITTIQAVGLSLIYGFAGQFSLGHAAFYGLGAYVAAFVTRAFGGN 87

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT---N 145
            L+  L +   A  +G   +++GLP L+ R DYL IATL    I + +L     ++    
Sbjct: 88  TLTFALALAAGAATAGLVALLIGLPILRLRSDYLGIATLGFGIIVKVLLDNADKLSPVLG 147

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G  G+    RL                              +  +  LS  +   L R++
Sbjct: 148 GARGMAGIPRLTTFH-------------------------WVFWLAVLSVWLARNLVRSS 182

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
              +   +R+++ A   +       K  AF V  A  G+AG  +A     + P  F F +
Sbjct: 183 HGRSCIAVREDEVAADIMGLDTTQFKTLAFVVGCAMAGLAGGLYAHLYSFLHPSSFDFLK 242

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           +  V+ +V+LGG+ SL+         + ++E   G+              F      +  
Sbjct: 243 SFDVLLVVVLGGLGSLTGTVVTAIGWVFLLEALRGV----------LGQQFLDWRGVVYA 292

Query: 326 IALFLVILMRSHSLLRLRTPSN 347
           + L +++++R   L+  R  S 
Sbjct: 293 LVLIVLMILRPQGLMGGREISL 314


>gi|299769972|ref|YP_003731998.1| branched chain amino acid ABC transporter [Acinetobacter sp. DR1]
 gi|298700060|gb|ADI90625.1| branched chain amino acid ABC transporter [Acinetobacter sp. DR1]
          Length = 356

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 68/328 (20%), Positives = 136/328 (41%), Gaps = 16/328 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L +   L+ FLF+         +++ +  L+  +   GL+I+ G  G LSL      A+
Sbjct: 28  ILFIFALLIAFLFVPFLGPDYLFNAILVPFLVLALAGLGLNILTGYTGQLSLGAAAFMAV 87

Query: 77  GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GA++   +      L + + I +  +I+   G+++GLPSL+ +G YL ++TL        
Sbjct: 88  GAFATYNLELRIPQLPLLVSIFLGGVIAALTGVVVGLPSLRIKGFYLIVSTLAAQFFIPW 147

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +  ++   TN  A   +                        +   +  Y + L +  +  
Sbjct: 148 LFTQYGWFTNNNASGVITAP-------------RMEILGYSINSPVGHYLLTLSIVVVLT 194

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254
           ++   L  +     +R +RD + A  ++   +   KL AFA+SS ++G+AGA +A A   
Sbjct: 195 ALARNLINSQYGRNFRAVRDMETAAITIGIPVSQTKLLAFAISSFYLGIAGALWAFAYLG 254

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            I  D    + +  ++ I+I+GG+ SL+      A ++ +  L   +    F   +    
Sbjct: 255 TIEADGLDLNRSFQILFIIIIGGLGSLTGSFLGAAFIVLLPILLSVLGQAVFGQAIDQAL 314

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   +    +   ++     L RL
Sbjct: 315 -LQNLQKIIFGALIIYFLIKEPEGLSRL 341


>gi|118588204|ref|ZP_01545613.1| branched-chain amino acid ABC transporter, permease protein
           [Stappia aggregata IAM 12614]
 gi|118438910|gb|EAV45542.1| branched-chain amino acid ABC transporter, permease protein
           [Stappia aggregata IAM 12614]
          Length = 353

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 47/326 (14%), Positives = 113/326 (34%), Gaps = 11/326 (3%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI- 83
           +   F               +I I+++      +++G  G++S    + + IGAY   + 
Sbjct: 25  ISLAFAPFLFPGTKSLETAARICIFIVLVASYDLLLGYAGIVSFAHTMFFGIGAYGTALA 84

Query: 84  --LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                    S+       A ++    + +GL SL+ +  + A+ TL ++  F  ++ +  
Sbjct: 85  LSTTGPNYGSLIWGTAAGAGVAALFALAIGLFSLRVKAIFFAMVTLAVASAFAVLVSQMS 144

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G+ G+                 + F    +    +I  YY++     +   ++L +
Sbjct: 145 WLTGGEDGLNYKIPRELTPAFKLIKAKVFDVSING---KILAYYLVFFAAAILFLVMLRI 201

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DM 260
             +      + +RDN     ++   +++ + +A  +S+    +AG+  A       P   
Sbjct: 202 VNSPFGRTLKAVRDNAFRAEAIGYRVVWYRTTATVLSAVMAALAGSLLAIWLRYTGPATT 261

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM----NFYYFNSLLKFDCSF 316
                 I ++ +V++GGM +L        + I        +            +      
Sbjct: 262 LSMEIMIDILLMVVIGGMGTLYGAVLGATLFILAQTYLQNLMGVAAEATSAVPVFSTLVA 321

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
             R    + +   L I      ++  
Sbjct: 322 PERWLLWLGVLFILSIYFFPTGIVGR 347


>gi|316933051|ref|YP_004108033.1| urea ABC transporter permease UrtC [Rhodopseudomonas palustris
           DX-1]
 gi|315600765|gb|ADU43300.1| urea ABC transporter, permease protein UrtC [Rhodopseudomonas
           palustris DX-1]
          Length = 398

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 44/326 (13%), Positives = 96/326 (29%), Gaps = 32/326 (9%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y+ S+  + + Y + A  + ++ G  G+LSL     +A+G Y+  +   R   +  + 
Sbjct: 44  PTYLISLFGKYVCYALLALSIDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIGTRGVY 103

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA------- 148
                           LP   +  D    A L++  +   +   +  +            
Sbjct: 104 ANPVLPDFMVFLNYKELPWYWYGFDMFWFAALMVLVVPGLLAFCFGWLAFRSRVTGVYLS 163

Query: 149 ------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                         +  D  +     +        F          ++ +      +   
Sbjct: 164 IITQAMTYALLLAFFRNDFGFGGNNGLTDFKDILGFNVQADGTRAALFMLSCLALAIGFL 223

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           I   +  + +      IRD +     L   +   KL  F +S+   G+AGA +      I
Sbjct: 224 ICRAVVTSKLGKVLIAIRDAESRTRFLGYRVESYKLFVFTLSACMAGVAGALYVPQVGII 283

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +P  F  + +I  +  V +GG  +L   A    ++     +                   
Sbjct: 284 NPSEFAPANSIEAVIWVAVGGRGTLVGAALGAVVVNYAKTVFTS-------------GPL 330

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
                 ++      V L+    ++  
Sbjct: 331 APYWLFMLGALFVAVTLLLPKGIIGT 356


>gi|167035911|ref|YP_001671142.1| inner-membrane translocator [Pseudomonas putida GB-1]
 gi|166862399|gb|ABZ00807.1| inner-membrane translocator [Pseudomonas putida GB-1]
          Length = 304

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 86/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P+
Sbjct: 9   LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVESFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LMLGTLLFTVVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+          + FV       ++L+        +   ++ T +    R  + ++K
Sbjct: 129 GVPTLLEGAMRVEVGTGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +    +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL     L  G+    +  +  F               L ++++ R   
Sbjct: 248 GSLPGAMLGGIILGISESLFSGLINSDYKDVFSFS-------------LLVMILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|26991546|ref|NP_746971.1| inner-membrane translocator [Pseudomonas putida KT2440]
 gi|148549946|ref|YP_001270048.1| inner-membrane translocator [Pseudomonas putida F1]
 gi|24986630|gb|AAN70435.1|AE016684_14 branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas putida KT2440]
 gi|148514004|gb|ABQ80864.1| inner-membrane translocator [Pseudomonas putida F1]
          Length = 304

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 86/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P+
Sbjct: 9   LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVESFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+          S FV       ++L+        +   ++ T +    R  + ++K
Sbjct: 129 GVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +    +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL     L  G+    +  +  F               L ++++ R   
Sbjct: 248 GSLPGAMLGGIILGISESLFSGLINSDYKDVFSFS-------------LLVMILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|85707330|ref|ZP_01038413.1| probable branched-chain amino acid transport system, permease
           component [Roseovarius sp. 217]
 gi|85668138|gb|EAQ23016.1| probable branched-chain amino acid transport system, permease
           component [Roseovarius sp. 217]
          Length = 334

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 56/312 (17%), Positives = 118/312 (37%), Gaps = 28/312 (8%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
             A  ++ +   +  +I+I  M    L +V G  G++SL       +GAY Y IL ++ G
Sbjct: 21  FQAFTAEYFGLEILTEIVILAMLVIALDMVAGFGGMVSLCHGALLGVGAYGYAILSTKLG 80

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L+  + +  +  I+GA   ++G    +  G Y  +ATL   ++             G + 
Sbjct: 81  LTPVVAMAGAVAIAGAVAWVIGAICARSHGIYFIMATLAFGQM-------------GYSY 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           ++ A                       +          LG+      + + + R+ +  +
Sbjct: 128 VFEAPLFGGDDGLGGIARLDLSLIGLDLNDGRSFALFSLGVLAAIYGVAVLILRSGLGRS 187

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              +  N++   +L  T+   K   F +S    G+AG   A     +SP +  ++ +   
Sbjct: 188 LSGVMHNEQRMRALGLTVWRVKADVFGLSGLISGLAGVMAAQHVMFVSPGLLSWTVSGEA 247

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           + +VILGG+ +L       A+ + +      +  Y+                 ++ I L 
Sbjct: 248 LVVVILGGLGTLVGPLLGAAVFVLLKHEVGALTSYWH---------------LVVGILLI 292

Query: 330 LVILMRSHSLLR 341
            V++ R++ +  
Sbjct: 293 AVVMSRANGIFG 304


>gi|284991625|ref|YP_003410179.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160]
 gi|284064870|gb|ADB75808.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160]
          Length = 422

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 98/303 (32%), Gaps = 28/303 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               L+  M A GLS++ G+ GL +        IGA +   +  + G+ +     ++ +I
Sbjct: 142 LRFGLLIAMAAVGLSLIFGTTGLTNFAHGELVTIGAIAAWFINVQGGVPLVPAALIAMVI 201

Query: 103 SGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
               G +  L   +   R     +A L++S     +L     I  G      AD      
Sbjct: 202 GAGVGALNELAIWRPLRRRGTGLVAALVISIGLSLLLRYLYQIIFGGGSEAYADYRGQRA 261

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
               +        SS VI  + +             + + L+RT I  A R + DN+   
Sbjct: 262 VDYGAFTMTNADLSSIVIALVVL-----------LLVAVMLQRTKIGKAMRAVADNRDLA 310

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            S    +    L  + +  A   + G     S +        F   +++ + V LGG+ +
Sbjct: 311 ASSGINVNRVILVVWMMGGALAALGGVLLGLSDEV--QWDMGFRLLLLMFAGVTLGGLGT 368

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  + ++   V++   +       +        +                R   +L
Sbjct: 369 AYGALVGSIVVGVFVQMSTLVIPNDVKYVGGLLLLIVILIV-------------RPQGIL 415

Query: 341 RLR 343
             R
Sbjct: 416 GSR 418


>gi|33592989|ref|NP_880633.1| putative permease component of branched-chain amino acid transport
           system [Bordetella pertussis Tohama I]
 gi|33572637|emb|CAE42231.1| putative permease component of branched-chain amino acid transport
           system [Bordetella pertussis Tohama I]
 gi|332382401|gb|AEE67248.1| putative permease component of branched-chain amino acid transport
           system [Bordetella pertussis CS]
          Length = 649

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 64/337 (18%), Positives = 126/337 (37%), Gaps = 36/337 (10%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            LR       +    ++  L +   L       Y   +   ILI V+FA  L  ++G  G
Sbjct: 315 PLRPAAPRLRILWGVLLASLAVLPLLAQWL--PYAVVLTQDILIAVLFAVSLHFMMGPGG 372

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           + S      + +GAY   +L     L +   +  + ++     ++ G   ++  G YLA+
Sbjct: 373 MHSFGHAAYFGLGAYGAALLLKAASLPMEAALAFAPLVGALGALVFGWFCVRLSGVYLAM 432

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL  S+I  +++ +W   T G  G+       +L  T    +      ++ +     ++
Sbjct: 433 LTLAFSQIVWSVVFQWDDFTGGSNGMIGVWPAEWLSGTAYYYLALAVVAAAVLGLRRVLF 492

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
                              +    A R  RD+     ++   +   + +AF V+ AF G+
Sbjct: 493 -------------------SPFGYAMRAGRDSSLRADAIGIDVKRVQWAAFVVAGAFGGL 533

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA +A S+  ISPD    S+++  + +V+LGG+ +L            + +       Y
Sbjct: 534 AGALYAFSKGSISPDTMAVSKSVDGLVMVLLGGIQTLIGPVVGATAFNVLQDYIMRATEY 593

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +                 L    + L++L+    +  
Sbjct: 594 WRA---------------LFGGVILLLVLVFPQGIAG 615



 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 100/307 (32%), Gaps = 18/307 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95
           + +   +     + A GLS++ G   +++      Y +G   AYS V       L  W  
Sbjct: 10  LLNGLAEASSLFLVAAGLSLIFGVTRIVNFAHGSLYMLGVYVAYSIVERVGGTALGFWFG 69

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  +++  G  G  + +  L+       +  L+ +     ++        G         
Sbjct: 70  LVAASLAVGVVGAAIEVVLLRRIYRAPELFQLLATFALVLVINDAALWIWGA-------- 121

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                   R+             Y ++   +++    +   + L L RT      R    
Sbjct: 122 --EDLLGRRAPGLTGAIDLLGRRYPVYNLVLIVVGPVVLGLLWLLLTRTRWGTLVRAATQ 179

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++   +L     +     FA+ +   G+ GA                        IV++
Sbjct: 180 DREMLGALGVNQAWLFTGVFALGAMLAGLGGALQLPREPA--SLSLDLRTIGDAFVIVVV 237

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S+     A  I+  +  LC G+      +LL    SF+     +    + LV++ R
Sbjct: 238 GGMGSIPGAYVAALIIAEIKALCIGLGT---VTLLGLSISFSKLTLVVEFAFMALVLVFR 294

Query: 336 SHSLLRL 342
              L   
Sbjct: 295 PWGLFGR 301


>gi|93005820|ref|YP_580257.1| inner-membrane translocator [Psychrobacter cryohalolentis K5]
 gi|92393498|gb|ABE74773.1| inner-membrane translocator [Psychrobacter cryohalolentis K5]
          Length = 356

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 50/340 (14%), Positives = 102/340 (30%), Gaps = 27/340 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +L ++  L L     +     Y  ++  +I+   M A  L +V G  G+LSL   + +
Sbjct: 21  FLVLLILPWLHLLPETSSFHLSAYWITLIGKIMALAMVALALDLVWGYAGILSLGHGLYF 80

Query: 75  AIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           A+G Y++ +  +                W  +P     +      M L  L         
Sbjct: 81  ALGGYAFGMYLTRETAGTGLPDFMRFLSWTELPWYWAGTQHFWWAMALVVLVPGLVAFIF 140

Query: 125 ATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                    +     +I            +  +  +              +  +      
Sbjct: 141 GYFAFRSKIKGVYFSIITQAMTYAAALLFFRNETGFGGNNGFTGFTTLLGYDITASSTRA 200

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            + +       LS   + +L           IRD++     L    ++ KLSA+ +S+  
Sbjct: 201 VLCFTTALALLLSYLGLRYLMSQPYGRVLGAIRDSENRLQYLGYRTLWYKLSAWVLSAVI 260

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AGA +      I+P       +I +   V  GG  SL         +  +       
Sbjct: 261 AGIAGALYVPQVGIINPGEMNPVNSIEMAVWVAAGGRGSLIGAIVGAGAINAIKTY---- 316

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     F  ++      ++     +V L   + ++ 
Sbjct: 317 ----------FTVAYPEFWLLILGGLFVVVTLFLPNGIIG 346


>gi|150376361|ref|YP_001312957.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
 gi|150030908|gb|ABR63024.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
          Length = 335

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 114/334 (34%), Gaps = 27/334 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
                ++L L +          ++  +I+   +    L +V G  G+ +L     +  GA
Sbjct: 24  LAALAVILVLAVIGYLLFPNNLALLTRIMAIALLVLSLDLVTGYCGVATLGHAALFGSGA 83

Query: 79  YSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           Y+  I    +      L++    +     G++ G+  L+  G    + ++ +  +F    
Sbjct: 84  YAAGIAAVHFGITDPLLMVAAGIIGGALAGLVCGVVILRAHGLPQLVLSIALIHLFHEFA 143

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            K    T G  G+         G              ++ ++    Y   + +  +    
Sbjct: 144 NKASSWTGGSDGLAGIAPDPLFGI------------FAYDLWGRTAYVFAVVLLAIVFMF 191

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  + R+      R I+++     ++  +   A L  + +S A  G+ GA  A S   + 
Sbjct: 192 LRLVVRSPFGMLCRGIKEDPIRIQAMGGSPTIALLKMYVISGAVAGVGGALNAVSTQVVG 251

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            D   F+ +   + +++LGG  SL      T + +   +L    N +++           
Sbjct: 252 LDSLSFTLSAESLVMLVLGGTGSLFGAVTGTIVFMLFEDLVSAANPFHW----------- 300

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               T++   L  V+L     L           R
Sbjct: 301 ---LTMVGALLIAVVLFAPKGLYGTVAEVLARRR 331


>gi|260890492|ref|ZP_05901755.1| hypothetical protein GCWU000323_01662 [Leptotrichia hofstadii
           F0254]
 gi|260859734|gb|EEX74234.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Leptotrichia hofstadii F0254]
          Length = 298

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/302 (15%), Positives = 109/302 (36%), Gaps = 20/302 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      IY + A G ++V G + L++        +GAY+  ++    G+ + L I +S
Sbjct: 10  INGLQTGSIYALIALGYTMVYGIVKLINFAHGDILMVGAYAT-LIAVSNGMPLILAIVLS 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            ++    G+++   + +   +   I+ LI +     +L     I  G        ++   
Sbjct: 69  IILCAIMGVVIDFFAYRPIRNAPKISALITAIGMSFLLESLALIIFGAN-----PKVIDQ 123

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                 L    +    F+   +   +V++       ++ L+++ T +  A R +  +  A
Sbjct: 124 KYIPAFLSNNNKINLGFLSISMLTIFVIVVTSICMIALNLFIKNTKLGKATRAVSQDTGA 183

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +       FA+ S    + GA +A    +I P M      +      + GG+ 
Sbjct: 184 AQLMGINVNKTIAITFAIGSGLGALGGALYAIVYPQIEPYM-GMLPGLKAFIAAVFGGIG 242

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        +L  +     G +   + + + F               L L+++ R + L
Sbjct: 243 SIPGAMVGGYVLGLLEAYVKGSSLTTWANPIVFG-------------VLILILIFRPNGL 289

Query: 340 LR 341
             
Sbjct: 290 FG 291


>gi|229196178|ref|ZP_04322928.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus m1293]
 gi|228587336|gb|EEK45404.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus m1293]
          Length = 317

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 59/322 (18%), Positives = 127/322 (39%), Gaps = 31/322 (9%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY   +
Sbjct: 2   LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61

Query: 84  LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           L  R      +  + I  + +IS     I+GL SL+ +  + A+ TL +S++F  +  KW
Sbjct: 62  LFDRQGVSITNFLIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T+G  G        F                         YYV L    +   ++  
Sbjct: 122 RGLTHGGDGFTFGVPDVFRERF-------------------TFYYVTLICLLIIFVLLRL 162

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++  +
Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVNTTV 222

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F     +  + + ++GG+ +L            +       +  Y+ S L  +     R 
Sbjct: 223 FSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIFERW 273

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
           T ++ +   +V+L+    L+  
Sbjct: 274 TIILGVLYIIVLLVFPKGLVGT 295


>gi|218779836|ref|YP_002431154.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218761220|gb|ACL03686.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 332

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 64/325 (19%), Positives = 130/325 (40%), Gaps = 26/325 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           LA+    L    +          ++ +++  +V++A  L++++   G+LS    + Y +G
Sbjct: 8   LALWVVFLAAAGIAPHVLGIVKTNVLVELAGFVLYAVSLNLLLSYTGVLSFGHALFYGVG 67

Query: 78  AYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           AY+  +L         +  + +S + +G  G+I+    ++  G   A+ TL   ++   +
Sbjct: 68  AYTTALLLYHVEGFPVIGALLLSGLAAGVIGLILSPLLVRVTGTAFAMLTLAFGQLMFIL 127

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            +K++ +T G+ GI   D            +      S  ++     YY  L +C +   
Sbjct: 128 CLKFREVTGGEDGIAGYDVP---------NLNIPGIASFDMLDPTVFYYFALAVCVIGVL 178

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           I+ ++ +T +      IRDN      L   +   K   FAVS  F G+AG+ FA  +  +
Sbjct: 179 IMWYITKTPLGQVVVGIRDNTLRVDYLGYKVPQTKAIVFAVSGFFAGIAGSLFALFQGIV 238

Query: 257 SPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           S D       +   I  +++GG+ +       + +LI + +L                  
Sbjct: 239 STDGVLHIMVSFYPIMAILIGGIGTFFGPILGSGVLIVLEDLI---------------MR 283

Query: 316 FNMRHTTLMVIALFLVILMRSHSLL 340
           +  R   +  +    V+L     LL
Sbjct: 284 YTERAELITGLLFIGVVLYAPGGLL 308


>gi|269837566|ref|YP_003319794.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
 gi|269786829|gb|ACZ38972.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
          Length = 331

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 67/335 (20%), Positives = 122/335 (36%), Gaps = 36/335 (10%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A V   L  L         Y   +   IL++   A   +I+ G  G +S      + IG
Sbjct: 8   IAPVLLGLAVLASLPFVLDPYWLRIATGILMWAGLACAWNIIGGYAGYISFGHSAFFGIG 67

Query: 78  AYSYVILGSRYGLSIW-LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           AY+  IL        + + + V  + +     ++G P+L+ RG Y AIAT   +E+   +
Sbjct: 68  AYAAGILMGNRYGLPFGVALLVGVVAASVVAALIGWPTLRLRGAYFAIATWAFAEMLLQL 127

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                 IT G AG+ +   L                         F Y +L+       +
Sbjct: 128 A-NILDITGGTAGLTLPPLLDE---------------------RFFFYAMLVAAVVTYGA 165

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               L R+      + +RD++ A  SL       K+ AF +S+A     G+ +A     I
Sbjct: 166 SYFLLERSRFGYRLKAVRDSEVAAESLGINTTLVKIQAFVLSAAIPAAFGSIYAYWITFI 225

Query: 257 SPDMFKFSENII-VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +P     +     ++ +V+LGG+      A                + Y  N ++  + +
Sbjct: 226 NPTSVLGAYIADQMVVMVLLGGLGHFWGPAIGAV------------SMYLVNRIIWTEWA 273

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
               +  ++   +  V+L     L+ L   +  L 
Sbjct: 274 NTTAYIAILGAVIAAVVLFLPDGLVSLWPGTRRLR 308


>gi|157145810|ref|YP_001453129.1| hypothetical protein CKO_01561 [Citrobacter koseri ATCC BAA-895]
 gi|157083015|gb|ABV12693.1| hypothetical protein CKO_01561 [Citrobacter koseri ATCC BAA-895]
          Length = 524

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 85/288 (29%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++    G  +   +    +++     +  + +   
Sbjct: 251 ITYGLLGVINMAHGEMLMLGAYSTWMVQQFMGQFMPQWLAFYPVVALPVAFL--IAAGTG 308

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 I   +     + +L  W         + +      L     + +       + +
Sbjct: 309 MALERGIIRHLYGRPLETLLATWGISLMLIQLVRMTFGAQNLEVANPAWLSGGVQVYANL 368

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                   VL     +     L L +T +    R +  N+              + AF +
Sbjct: 369 TLPWNRIVVLGFAMLVLFFTWLLLNKTRLGMRVRAVTQNRSMAACCGVPTGRVDMLAFGL 428

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+LGG+  L+    A   L    ++
Sbjct: 429 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVAAAFGLGIFNKI 486

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                    +++IA+ L I  R   L  L+  
Sbjct: 487 LEPQMGAVLGK-------------IVILIAIVLFIQKRPQGLFALKGR 521


>gi|49176906|ref|YP_025409.1| putative ABC transporter permease protein [Ralstonia eutropha
           JMP134]
 gi|72384291|ref|YP_293644.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|39777486|gb|AAR31061.1| putative ABC transporter permease protein [Ralstonia eutropha
           JMP134]
 gi|72123644|gb|AAZ65787.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 320

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 65/341 (19%), Positives = 134/341 (39%), Gaps = 40/341 (11%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
             R+++     C+ A+V+ LL           +    + +   I  +FA   ++++G  G
Sbjct: 12  PERMSRSTIGWCVAALVFALLPLAI------GESYAFLTVDFFIMSLFAMSYNLLLGQAG 65

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           +LS      Y +GAY+  IL ++YG+  WL +  + +++      +G  S++  G Y A+
Sbjct: 66  MLSFGHATYYGLGAYAVAILQNKYGVPPWLGLVAAPIVAALGAFAIGWLSVRVTGMYFAM 125

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL   ++   +++ W   T G  G+ VA                      +++     Y
Sbjct: 126 LTLAFGQLVFTLVLGWYTFTGGDDGLPVALP-------------------DWMLSARNYY 166

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y  L +  L   +I  + ++    A   IRDN++    +  ++   +L AF V++AF G+
Sbjct: 167 YFSLVIVALCIWLIYRVTKSPFGVALGAIRDNRQRAAYIGLSVRRLELQAFVVAAAFAGV 226

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG   A  +    P +  +S++   + + + GG+ S        A+ +           Y
Sbjct: 227 AGGLRAPLQQMAFPGLLNWSQSADPVLMALAGGINSFVGPIVGAALFVFTNFAVTSRFEY 286

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                             +    + L++L     ++     
Sbjct: 287 P---------------LLVFGTLVLLIVLFLPDGIVGTLRR 312


>gi|23500683|ref|NP_700123.1| branched-chain amino acid ABC transporter permease [Brucella suis
           1330]
 gi|163845070|ref|YP_001622725.1| hypothetical protein BSUIS_B0949 [Brucella suis ATCC 23445]
 gi|254712714|ref|ZP_05174525.1| hypothetical protein BcetM6_04976 [Brucella ceti M644/93/1]
 gi|254715784|ref|ZP_05177595.1| hypothetical protein BcetM_04986 [Brucella ceti M13/05/1]
 gi|256015718|ref|YP_003105727.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella microti CCM 4915]
 gi|256058881|ref|ZP_05449095.1| hypothetical protein Bneo5_00761 [Brucella neotomae 5K33]
 gi|261217548|ref|ZP_05931829.1| inner-membrane translocator [Brucella ceti M13/05/1]
 gi|261320423|ref|ZP_05959620.1| inner-membrane translocator [Brucella ceti M644/93/1]
 gi|261322816|ref|ZP_05962013.1| inner-membrane translocator [Brucella neotomae 5K33]
 gi|23464331|gb|AAN34128.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella suis 1330]
 gi|163675793|gb|ABY39903.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|255998378|gb|ACU50065.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella microti CCM 4915]
 gi|260922637|gb|EEX89205.1| inner-membrane translocator [Brucella ceti M13/05/1]
 gi|261293113|gb|EEX96609.1| inner-membrane translocator [Brucella ceti M644/93/1]
 gi|261298796|gb|EEY02293.1| inner-membrane translocator [Brucella neotomae 5K33]
          Length = 331

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 130/337 (38%), Gaps = 33/337 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +   L+  +         +     +++L + +FA   ++++G  G+LS      +
Sbjct: 25  LSAIVLGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 80

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              AY        +G+S  L + +  + + A G+++G  +++ +G Y  + TL ++++F 
Sbjct: 81  GGAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              ++                       ++ + R F F    +   + MYY +L +  L 
Sbjct: 141 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              I  +  +      +++R+N+    SL  ++   KL+AF +S+   G+AG   A    
Sbjct: 187 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 246

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             +     +  +  VI + +LGG+ +L       A ++ +       +F           
Sbjct: 247 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 297

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 T +  +     +L+    ++     S   ++
Sbjct: 298 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 328


>gi|295839497|ref|ZP_06826430.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease [Streptomyces sp. SPB74]
 gi|197699384|gb|EDY46317.1| ABC transporter, hydrophobic amino acid uptake transporter (HAAT)
           family, permease [Streptomyces sp. SPB74]
          Length = 309

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 93/305 (30%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      + IG +    + +       L   +
Sbjct: 8   LANGLILGAMYGLIAIGYTMVYGIVQLINFAHGEIFMIGGFGAYTVWTVLPDGSSLGAVI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             MI G     + + +   R  Y  +            LI    ++     +  A     
Sbjct: 68  PLMILGGILCSVLVGTAAERFAYRPLR----GAPRLAPLITAIGLSLFLQQLVWAFYPDA 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        F       +    +V++       ++  ++ RT      +    +  
Sbjct: 124 KSDISFPQFHGDPFHVLGATVQRGDLFVIIAAPVCMIALGWFVNRTRSGRGMQATAQDPD 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        + AFA+ +AF  +    +     +I   M  F   +   +  +LGG+
Sbjct: 184 TAKLMGINTDRIIVMAFAIGAAFAAVGAVGYGLHNGQIGFRM-GFIMGLKAFTAAVLGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L     L  G         L               + L +V+L+R   
Sbjct: 243 GNLYGAMLGGLVLGIAESLATGYMGDVPGMDL---FGGGAWKDVWAFVLLIVVLLIRPQG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|229160944|ref|ZP_04288933.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus R309803]
 gi|228622512|gb|EEK79349.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus R309803]
          Length = 317

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 58/331 (17%), Positives = 127/331 (38%), Gaps = 31/331 (9%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY   +
Sbjct: 2   LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61

Query: 84  LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           L  R      +  + I  + ++S     I+GL SL+ +  + A+ TL +S++F  +  KW
Sbjct: 62  LFDRQGVSITNFLIGIVAAIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T+G  G        F                         YYV          ++  
Sbjct: 122 RGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTFICLITIFIVLRL 162

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++  +
Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVATISGGLFVITLRFVNTTV 222

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F     +  + + ++GG+ +L            +       +  Y+ S L  +     R 
Sbjct: 223 FSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIFERW 273

Query: 321 TTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           T ++ +   +V+L+    L+         +R
Sbjct: 274 TIMLGLLYIIVLLVFPKGLVGTVKKLKGFKR 304


>gi|222102107|ref|YP_002546697.1| ABC-transporter [Agrobacterium radiobacter K84]
 gi|221728224|gb|ACM31233.1| ABC-transporter [Agrobacterium radiobacter K84]
          Length = 333

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 57/319 (17%), Positives = 110/319 (34%), Gaps = 24/319 (7%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  +     L       Y      ++L+    A  L++ VG  G++SL     + +  Y+
Sbjct: 12  MLAMFGAAVLLPWLVSGYYVQFAAKVLMLGTLAMALNLSVGFGGMVSLCHAAFFGLAGYT 71

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
            +++   Y +   LL   +A+   A   ++             I   +        L   
Sbjct: 72  LILVTPEYEVPSLLLTLAAAIAVVAVSALVIGLLSLRTRGIYFIMVTLAFGEMLFFLFHD 131

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             I  G  GI++  +           +         +   I  Y V L  C     +I  
Sbjct: 132 TGIGGGSDGIFLYVKPV---------LAAGSIVLLDLENPIVFYLVALSTCVACWCLITH 182

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  T   +A    RDN++   SL   +   +L AF VS+   G+AG   AA    ++P M
Sbjct: 183 LLATPFGDALTAARDNERRALSLGIPVFRVRLVAFVVSAVMAGIAGYLSAAQFGFVAPQM 242

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
             +  +   + +V+LGG   ++       +L+G+ +L       +               
Sbjct: 243 LGWHLSATALVMVVLGGTRRVAGPLFGAILLVGLEDLLKIYVEEW--------------- 287

Query: 321 TTLMVIALFLVILMRSHSL 339
                + + +++L     L
Sbjct: 288 KLYYGLIIIMLVLFVPGGL 306


>gi|13470929|ref|NP_102498.1| ABC transporter permease [Mesorhizobium loti MAFF303099]
 gi|14021672|dbj|BAB48284.1| probable permease of ABC transporter [Mesorhizobium loti
           MAFF303099]
          Length = 411

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 108/357 (30%), Gaps = 35/357 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLG--ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
           R+     IL   A+V PLL        A     YI ++  + L Y + A  L +V G  G
Sbjct: 14  RIAITILILLAAAIVVPLLNLAVSPTSAFYVPAYIVALTGKYLCYALLALALDLVWGYCG 73

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           +LSL     +A+G Y+  +   R   S  +                 LP   +  D+   
Sbjct: 74  ILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGNPILPDFMVFLNYKELPWFWYGFDHFWF 133

Query: 125 ATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRS 165
           A +++  +   +   +                             +  D  +     +  
Sbjct: 134 AAIMVLAVPGLLAFVFGWFAFRSRVTGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTD 193

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                 F          ++     M  L+  I   +  +        +RD +     L  
Sbjct: 194 FKDILGFNVQADATRSALFAASAAMLALAVFITWAIVGSKYGKLLMAVRDAESRTRFLGW 253

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                KL AF VS+   G+AGA +      I+P  F+ S +I V+    +GG  ++    
Sbjct: 254 RAENVKLFAFTVSAVMAGIAGALYVPQVGIINPGEFEPSNSIEVVIWAAVGGRGTIVGPI 313

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               ++        G+                      +      V L+    ++ +
Sbjct: 314 IGALLVNAGKSWFTGV--------------LPELWLFALGGLFVAVTLLLPKGIIGM 356


>gi|229178362|ref|ZP_04305731.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus 172560W]
 gi|228605092|gb|EEK62544.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus 172560W]
          Length = 317

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 59/322 (18%), Positives = 127/322 (39%), Gaps = 31/322 (9%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY   +
Sbjct: 2   LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61

Query: 84  LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           L  R      +  + I  + +IS     I+GL SL+ +  + A+ TL +S++F  +  KW
Sbjct: 62  LFDRQGVSITNFLIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T+G  G        F                         YYV L    +   ++  
Sbjct: 122 RGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVLLRL 162

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++  +
Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVNTTV 222

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F     +  + + ++GG+ +L            +       +  Y+ S L  +     R 
Sbjct: 223 FSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIFERW 273

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
           T ++ +   +V+L+    L+  
Sbjct: 274 TIILGLLYIIVLLVFPKGLVGT 295


>gi|94984908|ref|YP_604272.1| inner-membrane translocator [Deinococcus geothermalis DSM 11300]
 gi|94555189|gb|ABF45103.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Deinococcus geothermalis DSM 11300]
          Length = 326

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 65/316 (20%), Positives = 120/316 (37%), Gaps = 37/316 (11%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +Y+  +    L+  + A    I+    G +SL     Y +GAY + +L      
Sbjct: 40  PLGARAEYLLQIAFFTLVAGVLALSWDILA-RSGQVSLAHAAFYGLGAYGFALLVKVTP- 97

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             ++ +P+SA+I+    +I+G  +L+  G Y AIATL  +E+ + I+        G A  
Sbjct: 98  -WFVAMPLSALIAALISLILGAVTLRLSGMYFAIATLAFTEVVRTIIQNLPESVAGGANG 156

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +   L                           Y++  G+   +A + L +RR+ + +A+
Sbjct: 157 LLVPALLGGNAR-------------------AQYFLAFGVLLFTALVSLAIRRSRLHHAF 197

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DMFKFSENIIV 269
             IR  ++    L   ++  KL AF +SS    + G  +A     I+P + F  + +I  
Sbjct: 198 AAIRQGEETARVLGVQVVRYKLLAFFISSFLAALGGVLYAGKTFFINPLETFSLANSIAP 257

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           ++  I GG+ +         +L    E                  S    +  +  + L 
Sbjct: 258 LTTSIFGGLYTTLGPILGATVLRVAEEGL--------------HASVKNGYLIVYGLVLM 303

Query: 330 LVILMRSHSLLRLRTP 345
           L IL     L+ L   
Sbjct: 304 LSILWLPRGLMGLLRR 319


>gi|332286345|ref|YP_004418256.1| putative branched-chain amino acid transport permease [Pusillimonas
           sp. T7-7]
 gi|330430298|gb|AEC21632.1| putative branched-chain amino acid transport permease [Pusillimonas
           sp. T7-7]
          Length = 296

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/307 (15%), Positives = 96/307 (31%), Gaps = 19/307 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +  I  L Y + A GLS++ G L +++      Y +GAY+Y ++    G+  WL +P 
Sbjct: 7   FVNGLIIGLYYALMAVGLSMIFGILKVVNFAHGEFYMVGAYTYTLISLNLGVPPWLALPT 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+   A G +     ++          L+  E    +      +        +      
Sbjct: 67  AALAGAAIGWLTERWLMRPLYTGYGSWGLMKDEYAVVVTFGLSLLMINLFDKVIGPYPMR 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                 +     ++ +      + L+++R+      + +  N+ 
Sbjct: 127 GPALWDVSRLRIGPFMMSGQKVVTAVLAIVLL----VGLALFIKRSLWGRQIQAVAQNRL 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                      A    F  S     +AGA  A   +            +    IV++GGM
Sbjct: 183 GASIAGIDTGRASSIVFMASGVLAAVAGALLAPVIN--PAPDVGIFPAVKSYVIVVIGGM 240

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  +L  +         Y                 T  ++ L L+++ R   
Sbjct: 241 GSIPGSILAALLLGVLESFAAVYLSY-------------DYRDTYGLVLLILILMFRPQG 287

Query: 339 LLRLRTP 345
           L   R+ 
Sbjct: 288 LFGERSR 294


>gi|94313702|ref|YP_586911.1| putative branched-chain amino acid ABC transport system permease
           [Cupriavidus metallidurans CH34]
 gi|93357554|gb|ABF11642.1| putative branched-chain amino acid ABC transport system permease
           protein [Cupriavidus metallidurans CH34]
          Length = 331

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 54/319 (16%), Positives = 118/319 (36%), Gaps = 26/319 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            +     + A         +G QILI  +FA  L +++G  G++SL     + +GAY   
Sbjct: 18  IVFWLAPVVAFFLLPDYLILGSQILIVGLFALSLDLILGYAGIVSLGHAAFFGLGAYMAG 77

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +LG+         +  +A ++   G +     ++       + TL +  +      K   
Sbjct: 78  LLGAHGWGEPLTGLLAAAAVAALAGWLCSFLVIRGGDLTRLMVTLGIGLMLFEAANKAAF 137

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+                +        F ++    Y   L + F+   ++  L 
Sbjct: 138 LTGGVDGLSGV------------TMNKILGMFEFDLFGKTAYVYSLVVLFVIFLLVRRLV 185

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            +    + R IR+  +   +L T +     + F V++A  G+AG   A +   +  D+  
Sbjct: 186 ASPFGLSLRGIREGARRMPALGTDVPARLRAVFTVAAAIAGVAGGLLAQTTQFVGMDVLG 245

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  +  ++ +++LGG   L       A+ +   ++  G+N               +    
Sbjct: 246 FPRSAELLVMLVLGGTGRLYGALVGAALFMIAQDVLAGIN--------------PVYWQF 291

Query: 323 LMVIALFLVILMRSHSLLR 341
            + + L +++L     ++ 
Sbjct: 292 WIGLLLVVIVLFARGGVMG 310


>gi|297539870|ref|YP_003675639.1| inner-membrane translocator [Methylotenera sp. 301]
 gi|297259217|gb|ADI31062.1| inner-membrane translocator [Methylotenera sp. 301]
          Length = 356

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 63/322 (19%), Positives = 127/322 (39%), Gaps = 16/322 (4%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
                 F+ +    +  +  ++ I  L+  +   GL+++ G  G LSL      A+GA++
Sbjct: 32  ALLAFAFIVVPFIGNDYWFSAVLIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAVGAFA 91

Query: 81  YV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                    GL   +      + + A G+I GLPSL+ +G YL ++TL      Q  L  
Sbjct: 92  AYNFHLRIEGLPFLVSFFFGGITAAAVGVIFGLPSLRIKGFYLLVSTLAAQFFVQWALTN 151

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           +   ++  +   +      +     S               +  Y + L +      I  
Sbjct: 152 FAWFSHNSSSGVITAPPLIILGHDFSN-------------PVGRYLLTLTIVVALGLIAR 198

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRISP 258
            + ++ I   W  +RD   A   +  ++  AKL AF +SS F+G+AG+ +A      + P
Sbjct: 199 SIVKSEIGRQWMAVRDMDTAASVIGISVSKAKLLAFGISSFFLGIAGSLWAFTYLGTVEP 258

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F  + +  ++ I+I+GGM S+S      A ++ +  L   ++ +  +  +        
Sbjct: 259 HGFDLTRSFQILFIIIIGGMGSISGNFIGAAFIVLLPILLSVISNHLLSGAIDAG-QLEN 317

Query: 319 RHTTLMVIALFLVILMRSHSLL 340
               +    +   ++   + L 
Sbjct: 318 FQKIIFGALIIFFLIKEPNGLA 339


>gi|302546242|ref|ZP_07298584.1| putative branched-chain amino acid transport permease [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302463860|gb|EFL26953.1| putative branched-chain amino acid transport permease [Streptomyces
           himastatinicus ATCC 53653]
          Length = 310

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 97/308 (31%), Gaps = 7/308 (2%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            + + +      +Y + A G ++V G + L++      + IG +  + +         L 
Sbjct: 5   PQTLVNGLTLGALYGLIAIGYTMVYGIVQLINFAHGEIFMIGGFGALTIYLWLPSGTSLA 64

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + +  M+ G     + + +   R  Y     L        ++         +  ++    
Sbjct: 65  LSLPLMLIGGILASVAIATAAERFAY---RPLRGGPRLAPLITAIGLSIALQQAVWAFYP 121

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                 +           S  +  +    ++L+       ++ L++ ++    A +    
Sbjct: 122 DAKKARSFPQFEGSSFAISDSLHIQRGDAFLLIAAPLCMLALGLFVSKSRAGRAMQATAQ 181

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +      +        + AFA+  AF  +A         +I+ +M  F   +   +  +L
Sbjct: 182 DPDTAKLMGINTDRIIVMAFAIGGAFAAVAALSHGLKYGQINFEM-GFIAGLKAFTAAVL 240

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++        +L     L      Y  +                    L LV+L+R
Sbjct: 241 GGIGNIYGAMLGGVVLGIAEALA---IKYIQDIPGMDQLGGGAWKDVWAFTLLILVLLVR 297

Query: 336 SHSLLRLR 343
              LL  R
Sbjct: 298 PQGLLGER 305


>gi|260461099|ref|ZP_05809348.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259033133|gb|EEW34395.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 320

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 67/323 (20%), Positives = 124/323 (38%), Gaps = 24/323 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+   ++  LF+ +     Y   +  +IL+  +FA G +++ G +GLLSL   + +A G 
Sbjct: 11  ALHLGVIALLFVLSFVLPDYYHGLLARILVLAVFAMGYNLLFGYVGLLSLGHAMFFAAGL 70

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y   +   + G ++ L             + +GL +L+  G    I T++ +++F  +++
Sbjct: 71  YGAGLAVIQLGWNVPLAFAAGIACGAVLALAIGLLALRTTGVAFMIVTMMFAQVFYLLIL 130

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            +   T G  G  V      L              S  +      Y   L +  L   I 
Sbjct: 131 YFAVWTGGDQGQVVPQPARVLNL---------GATSLDLTNPTVRYMSALALFSLVLMIT 181

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           L + R+        IR+N++    L       KL+A  VS A    +GA +A     I  
Sbjct: 182 LAIVRSRHGRVLVAIRENEERAKMLGYDTFSNKLAAVVVSGAICAASGAAYALLFGYIGS 241

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                  +I+ +  V+LGG  +       T  +  V+++  G                  
Sbjct: 242 SFASVQYSILPLLWVLLGGAATTLGPLIGTLFMYYVIDVTSGY---------------TS 286

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
            +  ++ IAL L++L     +L 
Sbjct: 287 AYLLIVGIALILLVLFFPKGVLG 309


>gi|325273659|ref|ZP_08139872.1| inner-membrane translocator [Pseudomonas sp. TJI-51]
 gi|324101205|gb|EGB98838.1| inner-membrane translocator [Pseudomonas sp. TJI-51]
          Length = 304

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 86/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P+
Sbjct: 9   LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVESFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+          + FV       ++L+        +   ++ T +    R  + ++K
Sbjct: 129 GVPTLLEGAMRIDVGTGFVQLTYTKIFILVAAFLGMGLLTYVIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +    +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL     L  G+    +  +  F               L ++++ R   
Sbjct: 248 GSLPGAMLGGIILGISESLFSGLINSDYKDVFSFS-------------LLVMILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|296327742|ref|ZP_06870281.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
 gi|296155089|gb|EFG95867.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
          Length = 295

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 89/306 (29%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLL 95
           I +      IY + + G ++V G   L++        IGAY+ +     +      IW  
Sbjct: 7   IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYTSLFSIPLFTSMGLPIWTT 66

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  + +I    G +    + +   +   I+ LI +      +                  
Sbjct: 67  VIPAIIICAVIGCLAKRIAYRPLRNSPRISNLITAIGVSLFIENVFMKVFTPNTRSFPKI 126

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                 T            + +         +L    LS  + L++++T    A      
Sbjct: 127 FNQAPITF----------GNGINISFGAAITILTTVILSVGLQLFMKKTKYGKAMIATSQ 176

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   +   +       FA+ S    +    + ++  +I P M      I      +L
Sbjct: 177 DYAASELVGINVDRTIQLTFAIGSGLAAVGSVLYVSAYPQIQPLM-GSMLGIKAFIAAVL 235

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  L        IL  V  L              F               L +V+L +
Sbjct: 236 GGIGILPGAVLGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIIVLLFK 282

Query: 336 SHSLLR 341
              +L 
Sbjct: 283 PTGILG 288


>gi|296533638|ref|ZP_06896198.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
 gi|296266034|gb|EFH12099.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
          Length = 331

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 54/292 (18%), Positives = 108/292 (36%), Gaps = 18/292 (6%)

Query: 56  LSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           L++ +G  G++S      + +G Y+  IL + +     LL  +   +S    +   L ++
Sbjct: 56  LNLALGQGGMVSFGHAAFFGLGGYAVGILYAHWSWQEPLLGLIPGSVSLPVTL---LAAV 112

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
              G   A+   +         I                   + G    S+ R   FP  
Sbjct: 113 GLGGVAAAVIGALSLRTSGVPFIMITLAFAQMLFFLFVSLKAYGGDDGLSVRRQGEFPGL 172

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
            +     +Y++ LG+     +++  + R+         R +++   +L  T    KL  F
Sbjct: 173 SLRDPAQLYWLCLGLLVAWLALLRRVTRSRFGQVLGAARQSERRLRALGVTPYPYKLVGF 232

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            +S     +AGA        +SPDM  ++++  ++ +VILGG+ +L       A L+G+ 
Sbjct: 233 ILSGMGAALAGALMVNQARFVSPDMLHWTKSGELMIMVILGGVGTLLGPVFGAAALVGLE 292

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
            L      ++                 ++   L LV+L     L+ L   + 
Sbjct: 293 SLLSSWTEHW---------------QVILGPILLLVVLFARGGLMALLRRAL 329


>gi|313500848|gb|ADR62214.1| Inner-membrane translocator [Pseudomonas putida BIRD-1]
          Length = 304

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 86/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P+
Sbjct: 9   LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVESFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+          + FV       ++L+        +   ++ T +    R  + ++K
Sbjct: 129 GVPTLLEGAMRVEVGTGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +    +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL     L  G+    +  +  F               L ++++ R   
Sbjct: 248 GSLPGAMLGGIILGISESLFSGLINSDYKDVFSFS-------------LLVMILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|262044364|ref|ZP_06017427.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259038252|gb|EEW39460.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 524

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 90/296 (30%), Gaps = 33/296 (11%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGLSIWLLIPVSAMISGACGMI 109
           I  G LG+++++      IGAYS  ++                 + +PV+ +++   GM 
Sbjct: 251 ITYGLLGVINMDHGEMLMIGAYSCWLVQQALAQLAPQWLAFYPLVALPVAFLVTAGIGMA 310

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           +    ++          L    I   ++   + +   +               +   ++ 
Sbjct: 311 LERTIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNVEVANPA------WLSGGVQV 364

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                        + +VLL +CF    +     RT +    R +  N+            
Sbjct: 365 LPNLILPWNRLAVLAFVLLVLCFTWLIL----NRTRLGMNVRAVTQNRAMAACCGVPTGR 420

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
             + AF + S   G+ G   +   +            I    +V+LGG+  L+    A  
Sbjct: 421 VDMLAFGLGSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVAAAF 478

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
            L    ++                         L+++ + L I  R   L  L+  
Sbjct: 479 GLGIFNKILEPQMGAVLGK-------------ILILVMIILFIQKRPQGLFALKGR 521


>gi|157145809|ref|YP_001453128.1| hypothetical protein CKO_01560 [Citrobacter koseri ATCC BAA-895]
 gi|157083014|gb|ABV12692.1| hypothetical protein CKO_01560 [Citrobacter koseri ATCC BAA-895]
          Length = 357

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 96/324 (29%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------- 84
                 ++ ++  +IL Y + A  L +V G  G+LSL   I +A+G Y+  +        
Sbjct: 42  PLAVPVWVLTLAGKILCYAIVAVALDLVWGYAGMLSLGHGIFFALGGYAMGMYLMRQASG 101

Query: 85  ------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
                  S    S                +++ L        +   A     +     ++
Sbjct: 102 DGLPAFMSFLSWSELPWFWWGTQHFAWAMLLVVLVPGLLALVFGYFAFRSKIKGVYFSIM 161

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                  G    +  +  +              FP +     + ++   + +  L+  + 
Sbjct: 162 TQALTFAGMLLFFRNETGFGGNNGFTGFTTLLGFPVAATSTRVALFLATVILLVLALWLG 221

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 222 YLLARSKFGRVLTAVRDAENRLMFCGYDPRGFKLLVWTLSAVLCGLAGALYVPQVGIINP 281

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L        ++ G   L              F      
Sbjct: 282 SEMSPTNSIEAAIWVALGGRGTLIGPVFGAVLVNGAKSL--------------FTVIMPE 327

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                + +    V L     ++ L
Sbjct: 328 YWQLFLGLIFIGVTLFLPRGVIGL 351


>gi|296876042|ref|ZP_06900098.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           parasanguinis ATCC 15912]
 gi|296432953|gb|EFH18744.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           parasanguinis ATCC 15912]
          Length = 292

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 107/303 (35%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + ++ ++ + +
Sbjct: 8   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMVGAFMGYFLLNSWKVNFFVALLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +       IA LI +     +L        G            
Sbjct: 68  AMVGTAILGVVIEYLAYRPLRHSTRIAALITAIGVSFLLEYGMVFFVGANTRS------- 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I+  R+    +        +L    FL  ++   +++T +  A R +  +  
Sbjct: 121 ----FPQVIKTVRYNFGPISISNIQLMILGVSVFLMVALQFIIQKTKMGKAMRAVSVDSD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G  G       + I P M   +  I      +LGG+
Sbjct: 177 AAQLMGINVNRTISFTFALGSALAGAGGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +      +               +     ++   L +++L+R   
Sbjct: 236 GIIPGAALGGFVIGLLETFATAIG-------------LSDFRDAIVYAILIVILLIRPAG 282

Query: 339 LLR 341
           +L 
Sbjct: 283 ILG 285


>gi|254504561|ref|ZP_05116712.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222440632|gb|EEE47311.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 358

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 73/328 (22%), Positives = 130/328 (39%), Gaps = 13/328 (3%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +      L+ F+ + A  +  ++ S+ I  L++ + A GL+++ G  G LSL       +
Sbjct: 27  IGLAAILLIAFVAVPAFANDFFLTSIMIPFLVFSLAAIGLNVLTGFCGQLSLGTGAFMGV 86

Query: 77  GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GAY+   +       ++ L++ +S + S   G I GLPSL+ +G YLA+ TL      + 
Sbjct: 87  GAYAAYKLTTIFPDANVILMVLLSGIFSAGVGAIFGLPSLRIKGLYLAVTTLAAQFFLEW 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             I+   + N                 V     F    S      +  Y+++L +    A
Sbjct: 147 CFIRIPWLYNYN---------ASGAIEVPHREAFGVVVSGAESTPLVRYFIVLTITVGIA 197

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254
            ++  + R  I  +W  IRD   A   +    +  KL AFAVSS   G+AGA       +
Sbjct: 198 VLMANVLRGRIGRSWMMIRDMDIAAELMGIRPLQTKLLAFAVSSYICGVAGAMMVFFWLN 257

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
              P  +    +  V+ +VILGG+ SL       A +  +      +       +     
Sbjct: 258 AAEPSSYSIQLSFQVLFMVILGGLGSLGGAFMGAAFIWILPVFLKFIPGVLGIDVAAEAV 317

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   ++   +   +++  H   RL
Sbjct: 318 EHVT--FMIVGALIIFFLIVEPHGFARL 343


>gi|194290217|ref|YP_002006124.1| high-affinity branched-chain amino acid transport protein (ABC
           superfamily, membrane) [Cupriavidus taiwanensis LMG
           19424]
 gi|193224052|emb|CAQ70061.1| high-affinity branched-chain amino acid transport protein (ABC
           superfamily, membrane) [Cupriavidus taiwanensis LMG
           19424]
          Length = 308

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 94/297 (31%), Gaps = 16/297 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--------YVILGSRYGL 90
           + +      IY + A G ++V G +G+++      Y IGAY             G    L
Sbjct: 12  LVNGLTLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGAQAGYPLPL 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS M++G  G  +   + +       +  LI +      L  +  I  G    
Sbjct: 72  VLGAALLVSVMVTGVYGYAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +   I F       V        ++     L  ++ L++ R+ +  A 
Sbjct: 129 ----RDVSVPVLISGAIEFQMGGDFTVTVPYSRLLIVGVTLALMVALTLFIGRSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ +    L           F + +    + G     +  +++     F   I   
Sbjct: 185 RACAEDMRMANLLGIDTNKVISFTFVLGAMLAAVGGVLIGLTIGKLN-PFIGFIAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  +LGG+ S+        +L        G     +  ++ F     +       + 
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPAEYKDVVAFSLLVLVLLFRPTGLL 300


>gi|169831291|ref|YP_001717273.1| inner-membrane translocator [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638135|gb|ACA59641.1| inner-membrane translocator [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 293

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 92/303 (30%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++      Y IGA+   +     G +IW  +  
Sbjct: 10  LLNGITLGSVYALIALGYTMVYGIIKLINFAHGDVYMIGAFV-GLTAVVLGANIWFALCA 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +      + +   + +       +A LI S      +     +  G            
Sbjct: 69  AMLACLIVAVSIERVAYRPLRGSTRLAPLISSIGVSIFIQTLMTLIKGPQ---------- 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +++        +        +L+    L   + L +RRT +  A R   ++  
Sbjct: 119 -PVGFPQVVKNTIHTVGPLHISTVQIVILMVATCLMIILQLVIRRTKMGKAMRATSEDLH 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       FA+ +      G       + I P M      +      ++GG+
Sbjct: 178 TAGLMGINVNAVISFTFALGAVMAAAGGVLVGMYFNSIFPLM-GVMAGLKAFCAAVVGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L                 +L     F      +    L LV+L+R   
Sbjct: 237 GSVPGAVLGGLFLGVAE-------------VLGVAAGFGSYRDAIAFGLLILVLLIRPSG 283

Query: 339 LLR 341
           LL 
Sbjct: 284 LLG 286


>gi|144575336|gb|AAZ53607.2| putative ribose ABC transporter [Mycoplasma hyopneumoniae 7448]
          Length = 604

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 99/323 (30%), Gaps = 27/323 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            K+L L  ++  +   L +    S  +  ++    +     A G ++V+   G + L+  
Sbjct: 288 TKLLILFLIIAFITGALNVNFFSSYNWFVAILKNNIFIGFIALGQTLVI-LTGGIDLSVG 346

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                GA  Y++L  + GL    ++ +  +I  A G++ G+   KF+     +    +  
Sbjct: 347 SLIGFGATIYLLLTVKLGLHFVAVLFILIIILAAIGILNGILISKFKIPPFIVTLAGLLS 406

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +   I I  K                    T  +  +   F             ++L   
Sbjct: 407 LRGAIAILLKG-------------------TPITNAQDPIFNFFNYNLGSNFSVLVLVFI 447

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
              A +I +++ +        + DN  A            +  +  S  F  + GA   +
Sbjct: 448 ITVAVLIFFIKFSKFGRYVYAVGDNPVAATFSGIKNNKILILVYMFSGIFA-ILGALSIS 506

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           S          +   +  ++ V+LGG       A           +          +   
Sbjct: 507 SGTTSVSPNTGYGFELDTVTAVVLGG------TALTGGKGGVGKTIIGWFAMALLLNTFS 560

Query: 312 FDCSFNMRHTTLMVIALFLVILM 334
           F    +        I + L IL 
Sbjct: 561 FFQLDSNFRLVAKGIIIVLAILF 583


>gi|320328515|gb|EFW84517.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330885625|gb|EGH19774.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 323

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 67/321 (20%), Positives = 132/321 (41%), Gaps = 16/321 (4%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV- 82
           +  F+ +    +  +  ++ I  L+  +   GL+++ G  G LSL      A+GA++   
Sbjct: 2   VFAFIAVPLLGNDYWFSAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAVGAFAAYN 61

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +     G+ + L   +  ++S    ++ GLPSL+ +G YL ++TL    + + +L ++  
Sbjct: 62  LQLRVPGMPLLLGFALGGLVSALVALLFGLPSLRIKGFYLLVSTLAAQFVVEWVLTRFSW 121

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
            TN  A   +                               Y + LG+  L   +   L 
Sbjct: 122 FTNDNASGVITSPPLI-------------IAGVNFSSPQGRYLLTLGLVVLLFWLARNLL 168

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMF 261
           R  +   W  +RD   A   +   +  AKL AFA+S  ++G+AG+ +A A    + P  F
Sbjct: 169 RGELGRNWMAVRDMDTAAAVIGIRLFKAKLLAFAISGFYLGVAGSLWAFAYLGTVEPHGF 228

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             + +  ++ I+I+GG+ S+       A ++    L   ++      L+      N++  
Sbjct: 229 DLNRSFQILFIIIIGGLGSVQGNFLGAAFIVLFPILLGNLSALLPVGLIDSGQLENIQKM 288

Query: 322 TLMVIALFLVILMRSHSLLRL 342
            L    +   ++     L RL
Sbjct: 289 -LFGALIIAFLIKEPEGLARL 308


>gi|260465474|ref|ZP_05812664.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259029778|gb|EEW31064.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 326

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 60/328 (18%), Positives = 116/328 (35%), Gaps = 21/328 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +   V   L  + L       Y  S    + IY + A G ++V G  G +SL     +
Sbjct: 12  AGIAIAVVVALALVPLLPGAIDSYAFSFLFFVFIYAIMAQGWNLVAGFGGQISLGNHAFF 71

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY+  IL S   L   L      +            ++   G   A+A +I+     
Sbjct: 72  GLGAYTTAILWSGNYLWGSLYDAYPRI------YYFDPLTMVLGGLVAAVAAIIIGLPLL 125

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           + L              +   ++  G            P+      +  Y V LG+   +
Sbjct: 126 SKLRGDYFALGTLGFGEIVKVMFINGGDFTGGAFGVVAPAGTFDTLLPHYLVGLGLMVGT 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  + +L R+    A   +RD++ A  +     +  K++AFA S+   G+AG+ +     
Sbjct: 186 ALAVRFLMRSRYGLALIAVRDDEMAASANGIDTLRVKVAAFAGSAFIAGIAGSLYTYYIF 245

Query: 255 RISPDMFKFSENIIV-ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
            + PD     + +++ + + ++GG  +L        ++  V +L                
Sbjct: 246 HVGPDSVFALDWMLLPLMMTVVGGTGTLLGPILGAFVMYAVFDLAR-------------- 291

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                 H  +  + + L +L     L+R
Sbjct: 292 IVVPDYHPVISGLTIILAMLFLPKGLMR 319


>gi|329116809|ref|ZP_08245526.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Streptococcus parauberis NCFD 2020]
 gi|326907214|gb|EGE54128.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Streptococcus parauberis NCFD 2020]
          Length = 289

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 107/303 (35%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L +   L+ ++ + +
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYYLINTLHLNFFVTLLL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +   +   IA LI +     +L        G            
Sbjct: 65  TMVTTATLGVLIEFLAYRPLRNSTRIAALITAIGVSFLLEYGMVYFVGAEARA------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   ++  ++    +        +LL    L  ++   +++T +  A R +  +  
Sbjct: 118 ----FPQALKIIKYNFGPISVTNVQLTILLVSLMLMLALQFIVKQTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G  G       + I+P M   +  I      +LGG+
Sbjct: 174 AAQLMGINVNSTISFTFALGSALAGAGGVLIGLYYNSINPLM-GMTPGIKAFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    I+  +      +               +     ++   L +++L+R   
Sbjct: 233 GIIPGAALGGFIIGLLETFSTSIG-------------LSSYRDAIVYAVLIIILLIRPAG 279

Query: 339 LLR 341
           LL 
Sbjct: 280 LLG 282


>gi|295397177|ref|ZP_06807280.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Aerococcus viridans ATCC
           11563]
 gi|294974566|gb|EFG50290.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Aerococcus viridans ATCC
           11563]
          Length = 292

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 101/303 (33%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G +GL++      Y +GA+    L +  G++I   + +
Sbjct: 8   LVNGLSLGSIYALMALGYTMVYGIIGLINFAHGDVYMVGAFFGFWLITGLGMNIIPALIL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+I+   + K       IA LI +     +L  +     G            
Sbjct: 68  TMIFTAILGVIIERVAYKPLRKSTRIAALITAIGVSYLLQNFMIYYVGPE---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 + +                  + +    L  ++   +R+T +    R +  +  
Sbjct: 118 -VRAFPTSLPNLSLDLGLFTISTQQVVIFIVTIILMIALQYIVRQTKMGQGMRAVSVDAD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +  ++       FA+ SA  G  G       + ISP M   +  I      +LGG+
Sbjct: 177 AARLMGISVDSIISFTFAIGSALAGAGGVLVGIYYNSISPTM-GLTPGIKAFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  V  +                   +      +   L ++++ +   
Sbjct: 236 GSIPGAMLGGVLIGVVESMVS-------------MIGLSTWRDAAVYFILIIILVFKPSG 282

Query: 339 LLR 341
           LL 
Sbjct: 283 LLG 285


>gi|298486902|ref|ZP_07004956.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298158567|gb|EFH99633.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 316

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 66/315 (20%), Positives = 129/315 (40%), Gaps = 16/315 (5%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRY 88
           +    +  +  ++ I  L+  +   GL+++ G  G LSL      A+GA++   +     
Sbjct: 1   MPLLGNDYWFSAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAVGAFAAYNLQLRVP 60

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           G+ + L   +  ++S    ++ GLPSL+ +G YL ++TL    + + +L ++   TN  A
Sbjct: 61  GMPLLLGFALGGLVSALVALLFGLPSLRIKGFYLLVSTLAAQFVVEWVLTRFSWFTNDNA 120

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
              +                               Y + LG+  L   +   L R  +  
Sbjct: 121 SGVITSPPLI-------------IAGVNFSSPQGRYLLTLGLVVLLFWLARNLLRGELGR 167

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSENI 267
            W  +RD   A   +   +  AKL AFA+S  ++G+AG+ +A A    + P  F  + + 
Sbjct: 168 NWMAVRDMDTAAAVIGIRLFKAKLLAFAISGFYLGVAGSLWAFAYLGTVEPHGFDLNRSF 227

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            ++ I+I+GG+ S+       A ++    L   ++      L+      N++   L    
Sbjct: 228 QILFIIIIGGLGSVQGNFLGAAFIVLFPILLGNLSALLPVGLIDSGQLENIQKM-LFGAL 286

Query: 328 LFLVILMRSHSLLRL 342
           +   ++     L RL
Sbjct: 287 IIAFLIKEPEGLARL 301


>gi|170079160|ref|YP_001735798.1| high-affinity branched-chain amino acid transport permease protein
           [Synechococcus sp. PCC 7002]
 gi|169886829|gb|ACB00543.1| high-affinity branched-chain amino acid transport permease protein
           [Synechococcus sp. PCC 7002]
          Length = 296

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 92/302 (30%), Gaps = 16/302 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      I  + A GL++  G L L +        +GAY   +  S        ++  
Sbjct: 7   VLNGLSVGSILALAAVGLTLTYGILRLSNFAHGDYMTLGAYITWLSNSLGLNIWLSMVVG 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +    G   +   L     R       TLI+  I   + I+   +    +G    D    
Sbjct: 67  AFGTIGGMLVAEKLLWQPMRDKRATPTTLIIISIGLALFIRSAVLFIWGSGNQQYDLPVV 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +  L+         +    +   V++    +   +   L+ + +  A R + DN  
Sbjct: 127 RAINLTELVGLP-ETVPDLRIAYYRVVVMVLTVLVILGLHFILQNSKVGKAMRAVADNID 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   +    L  + ++     +AG+ +             +   + + + VILGG+
Sbjct: 186 LARVSGIDVERVVLWTWIITGTLTAIAGSMYGLITTV--RPNMGWFLILPMFASVILGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +         ++    EL                         + +  + +++L+R   
Sbjct: 244 GNPYGAIAGAFVIGIAQEL-------------SVAWLGPDYKLGVALFIMVVLLLVRPQG 290

Query: 339 LL 340
           L 
Sbjct: 291 LF 292


>gi|91780479|ref|YP_555686.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693139|gb|ABE36336.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 357

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 55/327 (16%), Positives = 110/327 (33%), Gaps = 26/327 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L +    +    L    +  ++ S     L+  + A    ++ G  G+L+L      
Sbjct: 23  VSALLMWSVAMAAAALVPFFAGPWLLSTVRDALVMGILALSYDLLWGRAGVLTLGHTTFL 82

Query: 75  AIGAYSYVILGSRYGLSIW--LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            +GAY + +   ++G +    L+  V    + A  +   L     R  + AI +L +  +
Sbjct: 83  GLGAYGFAVATVQFGQAPVTGLVAGVLCAAAVAAVIGYFLLFAGVRLHFFAIISLAVLIV 142

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            Q + + W+ +T G  GI     L F               +  +      +Y +  +  
Sbjct: 143 AQQLAVSWQSVTGGDTGILGIPGLSFSA----------GGHTLDMSGPRASWYTVAIVLL 192

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +  +I  + R+        I  N+    +      F  L  F  S+A   +AG   AA 
Sbjct: 193 AATGLIWLVCRSRYGKVLDAIAANEWRAKACGYHTSFHLLLVFVASAALAAIAGVLMAAC 252

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              ++PD+F       VI  V +GG         A  +L  + +     +   +      
Sbjct: 253 SGVVAPDVFSPILATEVILWVAIGGRGRTGGPVVAAVVLTLLRQTVSSYSTDGWP----- 307

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSL 339
                     ++       +L   + L
Sbjct: 308 ---------LILGGLFLACVLFLPNGL 325


>gi|254238419|ref|ZP_04931742.1| hypothetical protein PACG_04560 [Pseudomonas aeruginosa C3719]
 gi|126170350|gb|EAZ55861.1| hypothetical protein PACG_04560 [Pseudomonas aeruginosa C3719]
          Length = 359

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 89/304 (29%), Gaps = 13/304 (4%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS- 86
               A     Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +    
Sbjct: 39  PADSALHLSAYSLTLTGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMR 98

Query: 87  ---------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
                          W  +P     +      + L  L       A          + + 
Sbjct: 99  QASGDSLPAFMIFLSWNELPWYWAGTKNFLWALCLVVLVPGALAFAFGYFAFRSRIRGVY 158

Query: 138 IKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                     AG+ +  R    +              FP +       ++   + +   S
Sbjct: 159 FSIMTQALTFAGMLLFFRNETGFGGNNGFTDFRSILGFPITAPGTRAALFLATVALLAAS 218

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L R+        +RD +             KL  + +S+   G+AGA F     
Sbjct: 219 LLLGWRLARSKFGRVLTALRDAENRLMFCGYDPRGYKLFVWTLSAVLCGLAGALFVPQVG 278

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            I+P     + +I     V LGG  +L        ++ G           Y+   L    
Sbjct: 279 IINPSEMSPTNSIEAAVWVALGGRGTLLGPLLGAGVVNGAKSWFTVAFPEYWLFFLGALF 338

Query: 315 SFNM 318
               
Sbjct: 339 IVVT 342


>gi|302518450|ref|ZP_07270792.1| urea ABC transporter, permease UrtB [Streptomyces sp. SPB78]
 gi|318056308|ref|ZP_07975031.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces sp. SA3_actG]
 gi|318075969|ref|ZP_07983301.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces sp. SA3_actF]
 gi|333027881|ref|ZP_08455945.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces sp. Tu6071]
 gi|302427345|gb|EFK99160.1| urea ABC transporter, permease UrtB [Streptomyces sp. SPB78]
 gi|332747733|gb|EGJ78174.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces sp. Tu6071]
          Length = 309

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 94/305 (30%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      + IG +    + +       L   +
Sbjct: 8   LANGLILGAMYGLIAIGYTMVYGIVQLINFAHGEIFMIGGFGAYTVWTLLPDGSSLAAVI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             MI G     + + +   R  Y  +            LI    ++     +  A     
Sbjct: 68  PLMILGGILCSVLVGTAAERFAYRPLR----GAPRLAPLITAIGLSLFLQQLVWAFYPDA 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        F       +    +V++       ++  ++ RT      +    +  
Sbjct: 124 KSDISFPQFHGDPFHVLGATVQRGDLFVIIAAPVCMIALGWFVNRTRSGRGMQATAQDPD 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        + AFA+ +AF  +A   +     +I   M  F   +   +  +LGG+
Sbjct: 184 TAKLMGINTDRIIVMAFAIGAAFAAVAAVGYGLHNGQIGFRM-GFIMGLKAFTAAVLGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L     L  G         L               + L +V+L+R   
Sbjct: 243 GNLYGAMLGGLVLGIAESLATGYMGDVPGMDL---FGGGAWKDVWAFVLLIVVLLIRPQG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|311103576|ref|YP_003976429.1| urea ABC transporter permease UrtC 1 [Achromobacter xylosoxidans
           A8]
 gi|310758265|gb|ADP13714.1| urea ABC transporter, permease protein UrtC 1 [Achromobacter
           xylosoxidans A8]
          Length = 348

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 43/337 (12%), Positives = 99/337 (29%), Gaps = 27/337 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A++    L L +       +  ++  + + +   A G+ +  G  G+LSL   I + +G
Sbjct: 11  IAILLVAALILAVLPLSLDPFRLNLVGKYMAFAFVAIGIVLTWGYSGVLSLGQGIFFGLG 70

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y   +       +  L   +      +  +             L +    ++    ++ 
Sbjct: 71  GYMMAMFLKLEASAPELPDFMVWSSVDSLPVWWQPFHSLTLTLLLIVVLPGLAAYLFSLA 130

Query: 138 IKWKPITNGKAGIYV-------------ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           I  K ++     I                         +        +       +  +Y
Sbjct: 131 IFRKRVSGVYFAIVTLALAMTLTVLIIGQQGDTGGANGITDFRTLLGWDIVGDDGKQALY 190

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           ++  G   ++    L + R+ +      IRD +             K   FAV++    +
Sbjct: 191 FIEAGALIVAMLAALAIVRSRLGKILIAIRDREDRVRFSGYDTAHVKACIFAVAAVLSSI 250

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            GAFF      ISP       +I ++    +GG  S+        ++  +          
Sbjct: 251 GGAFFTLQVGLISPGAIGVVASIEMVIYAAVGGRLSIPGAVVGALLIGFLKSYLSE---- 306

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     +F       +      V+++  + L  
Sbjct: 307 ----------TFPEVWLYFLGAIFIAVVVIMPNGLAG 333


>gi|300024322|ref|YP_003756933.1| inner-membrane translocator [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526143|gb|ADJ24612.1| inner-membrane translocator [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 296

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 50/304 (16%), Positives = 97/304 (31%), Gaps = 16/304 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                I  + A GL+IV G++ +++L       IGAY  V+     GL I+  +P++ ++
Sbjct: 8   LSIASILFIVALGLAIVYGTMKVINLAHGEMVMIGAYVTVLASKHLGLGIYSCLPLAFLV 67

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN-GKAGIYVADRLYFLGT 161
           +   G+ +    ++     L    L    I   +    +     G  GI++      L  
Sbjct: 68  AALFGLAIERLVVRPLYGRLLDTLLATWGIALILQQLIRIHFGFGLFGIHIDGLGSDLQN 127

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                              ++  +V      L       + +T   +  R +   +    
Sbjct: 128 VPVPPELQQTLHILGTNIPVYRAFVFGVAAVLGLVSWWLIYKTRFGSQLRAVSAARDITA 187

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           +           AFA  S   G+AG   +  +             I    +V+ GG+  L
Sbjct: 188 ACGVNDKRINALAFAYGSGLAGVAGVLVSGFKTV--SPDMGAPYVIDAFMVVVAGGVGHL 245

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                +  IL  V                    S ++   T++   + L++L +   L  
Sbjct: 246 LGTVLSAGILGEVQSFVAT-------------WSNDVYGRTVLFAFVILILLFKPQGLFV 292

Query: 342 LRTP 345
            R  
Sbjct: 293 SRNR 296


>gi|73542004|ref|YP_296524.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72119417|gb|AAZ61680.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 308

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 96/297 (32%), Gaps = 16/297 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G ++V G +G+++      Y IGAY  ++  +           L
Sbjct: 12  LVNGLTLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGVQAGYPLPL 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +   + VS +I+G  G  +   + +       +  LI +      L  +  I  G    
Sbjct: 72  VLGAALLVSVVITGCYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +   I F       V        ++     L  ++ L++  + +  A 
Sbjct: 129 ----RDVSVPILISGAIEFQMGSDFTVTVPYSRLLIVGVTLVLMIALTLFIGHSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ +    L           F + +    + G     +  +++     F   I   
Sbjct: 185 RACAEDMRMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLN-PFIGFIAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  +LGG+ S+        +L  V     G     +  ++ F     +       + 
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLVETFASGYMPAEYKDVVAFSLLVLVLLFRPTGLL 300


>gi|160943798|ref|ZP_02091029.1| hypothetical protein FAEPRAM212_01296 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444972|gb|EDP21975.1| hypothetical protein FAEPRAM212_01296 [Faecalibacterium prausnitzii
           M21/2]
 gi|295104031|emb|CBL01575.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           (TC 3.A.1.4.-) [Faecalibacterium prausnitzii SL3/3]
          Length = 292

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 96/305 (31%), Gaps = 25/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G S+V G + LL+        +GAY    + ++ GL     +  
Sbjct: 8   LINGLSLGSIYALIALGYSMVYGIILLLNFAHGDVIMVGAYMSWFVMNQLGLGPVTAVCA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+++   +         I+ LI +      L     +  G            
Sbjct: 68  TIITCTLLGVVIEKIAYTPLRSAPRISLLITAIGVSFFLEYTAELILGS----------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +      F    V   +     L+        +   +++T +  A R + ++  
Sbjct: 117 GAKVIPAYYTNQTFRLGKVPLGLTSIITLVVTVLSMLVLTFLVQKTKLGKAMRAVSEDMD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FAV SA  G+    +  S  + +P M      +      +LGG+
Sbjct: 177 AARLMGINVNSTISFTFAVGSALAGIGSVLYCCSYPQATPTM-GSMLGLKAFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +         +    +   + F               L +V+L++   
Sbjct: 236 GSIPGAMVGGIAIGLCECFVSAIGLSAWKDAVTF-------------AILIIVLLVKPTG 282

Query: 339 LLRLR 343
            L  +
Sbjct: 283 FLGRK 287


>gi|239931888|ref|ZP_04688841.1| branched chain amino acid transport permease [Streptomyces
           ghanaensis ATCC 14672]
 gi|291440256|ref|ZP_06579646.1| branched chain amino acid transport permease [Streptomyces
           ghanaensis ATCC 14672]
 gi|291343151|gb|EFE70107.1| branched chain amino acid transport permease [Streptomyces
           ghanaensis ATCC 14672]
          Length = 310

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 102/308 (33%), Gaps = 13/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---SYVILGSRYGLSIWLL 95
           + +  +   +Y + A G ++V G + L++      + +GA+   +  +     G SIW+ 
Sbjct: 8   LVNGLLLGSMYGLVAIGYTMVYGIVQLINFAHGEIFMVGAFGAITVHLYLLPDGTSIWVA 67

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +P+  + +    +++ + + +F    L  A  +        LI    ++        A  
Sbjct: 68  LPLMLLGAVIVSVLVAIGAERFAYRPLRGAPRLAP------LITAIGLSLALQQAVWAFY 121

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                      I    F       +    ++L+      A +  ++ RT      +    
Sbjct: 122 PEAKSKLAFPQIEGGPFSIGGATIQTGDIFLLIAAPISMAFLAYFVMRTRTGRGMQATAQ 181

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +      +        + AFA+ + F  + G        +I   M  F   +   +  +L
Sbjct: 182 DPDTAKLMGVNTDRIIVIAFALGAVFAAVGGVASGLKYGQIDFKM-GFILGLKAFTAAVL 240

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++        +L  V  L                 S+      +++I + L    R
Sbjct: 241 GGIGNIYGAMIGGLVLGIVETLATAYIADIPGLHQFGSQSWAEVWAFILLILVLLF---R 297

Query: 336 SHSLLRLR 343
              LL  R
Sbjct: 298 PQGLLGER 305


>gi|121605608|ref|YP_982937.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120594577|gb|ABM38016.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 351

 Score = 83.4 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 55/336 (16%), Positives = 118/336 (35%), Gaps = 26/336 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
                   L+  L L    S   + S+  Q  I+ +FA G+ +++   G+ S      + 
Sbjct: 9   IFAFSGAALVAGLALTFGVSSGTVLSLLTQATIFAIFALGVGLLLRQNGMASFGHATYFG 68

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
              Y   IL     +     I ++ +       ++GL  ++  G    + TL + ++F  
Sbjct: 69  SAGYIIGILLQLKAVPAEAAIVLAVLGITGFAFLLGLVIVRVPGIAFGMLTLAVGQMFFL 128

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
              + + +T G  G+ +                 F FP S ++    M+ +   +  +  
Sbjct: 129 TANRSRGLTGGADGMNIEWPAT-----------LFGFPMSAIVQPGNMFMLSWAVLVVCM 177

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +              +RDN++    +    +  + + FA+S+    +AG   A +   
Sbjct: 178 GGLALGLHGRFGAITEAVRDNEERARFIGIRTLLPRAALFALSAGITSVAGTLTALNTGF 237

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +SP+   +S + + + +VI+GG  +L   A    +     ++      ++          
Sbjct: 238 VSPESLHWSVSGVALMMVIVGGYKALWGPALGAIVYFLAKDVLGDYANHW---------- 287

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                  +  IAL  VI+     L          +R
Sbjct: 288 -----MAIFGIALITVIVFSPTGLAGALGRLFKGKR 318


>gi|163735729|ref|ZP_02143159.1| inner-membrane translocator [Roseobacter litoralis Och 149]
 gi|161390982|gb|EDQ15321.1| inner-membrane translocator [Roseobacter litoralis Och 149]
          Length = 410

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 106/356 (29%), Gaps = 32/356 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGA--------TKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           +      +LAVV     F F           +     I +  I  +IY   A GL+++  
Sbjct: 55  RVTTTFGILAVVLIAAAFSFADPQNNCVANGSFVASQISNGLIIGIIYGFMALGLTLIFS 114

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGL------SIWLLIPVSAMISGACGMIMGLPSL 115
            LG++S      Y IG      + + +         +     ++  +       M  P  
Sbjct: 115 ILGVVSFAHGEFYMIGGMLVYYITAVWFPGVSPLLGVLGACFIAFCLGAVFERAMLTPMY 174

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
           K + D      ++ +      L  +    +G + +  +  + F               +S
Sbjct: 175 KGKVDRPVEYGILATFGLAFTLQYFVQAVHGASPVKASRFIDFPRIRWPEDADPLWIKTS 234

Query: 176 FVIYEIF--------MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                +F         +   +    +  +++  L RT    A R +  ++ A        
Sbjct: 235 RGNLTLFETISISNPRFVAAITCILVLLALLYLLHRTWTGKALRAVSQDRDAAAIAGIDP 294

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
               + AFA+      +AGA    +   +          +    IV+LGG+ SL      
Sbjct: 295 NRMNMLAFALGGMIAALAGALLVQAFSWL--PQVGAIPAMRSFVIVVLGGLGSLPGAFFG 352

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
             I+  V     G       +         +  T  +++        R   L   R
Sbjct: 353 GIIVGLVEAAGTGCVPDAQKAASYIPAYGMIVLTLTLLL--------RPTGLFGRR 400


>gi|124266315|ref|YP_001020319.1| putative amino-acid transmembrane ABC transporter protein
           [Methylibium petroleiphilum PM1]
 gi|124259090|gb|ABM94084.1| putative amino-acid transmembrane ABC transporter protein
           [Methylibium petroleiphilum PM1]
          Length = 335

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 46/332 (13%), Positives = 102/332 (30%), Gaps = 10/332 (3%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            + L   AV+    L   L      + I +  +   +Y + A G ++V G + L++    
Sbjct: 9   YRPLGGAAVLIHSALQGDLTMDIFIQQIINGLVLGSMYALVALGYTMVYGIINLINFAHG 68

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               +GA +   + +     +        ++     +   +           IA   +  
Sbjct: 69  EVLMVGALTSWTVVT----VLAAAGLPGWLLLLISLVAAIIVCSALNFAIEKIAYRPLRN 124

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
             +   +      +                    L+    F     +       +L+   
Sbjct: 125 APRLAPLITAMGMSLLLQTLAMIIWKPNYKPYPILLPSEPFNVFGAVINTTQILILVVTA 184

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
              A ++  + +T +  A R   +N +    +         + F + +A   +AG  +AA
Sbjct: 185 LTLAGLMFLVNKTKLGRAMRATAENPRVAGLMGVRPDTVISATFVIGAALAALAGVMYAA 244

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           +   +   M  F   +   +  + GG+ +L        +L  +  +  G        +L 
Sbjct: 245 NYGSVQHTM-GFLPGLKAFTAAVFGGIGNLPGAMVGGVLLGLIESIGSGYIGQLTGGVLG 303

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                +        I L LV+ +R   LL  R
Sbjct: 304 -----SHYQDIFAFIVLILVLTLRPQGLLGER 330


>gi|327481917|gb|AEA85227.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas stutzeri DSM 4166]
          Length = 335

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 51/327 (15%), Positives = 106/327 (32%), Gaps = 26/327 (7%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
               + L +             +++L + +FA   ++++G  GLLS      +A G Y  
Sbjct: 31  VFYAVLLVIALLAPLAVYPVFLMKLLCFALFACAFNLLLGYAGLLSFGHAAFFATGGYIT 90

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
             + S Y      L  ++  ++      +       R         +        +    
Sbjct: 91  GYMLSSYSGLSTELGILAGTLASTVLGALFGMLAIRRQGIYFAMITLALAQLVFFVFVQA 150

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
           P T G+ G+    R                F    +   + MYY +L +  L  +II   
Sbjct: 151 PFTGGENGLQGVPR-------------GHLFGLVDMKNNMAMYYFVLAVFVLGFAIIQRT 197

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +      + IR+N+    SL   +   KL AF +S+A  G+AG+         S    
Sbjct: 198 IHSPYGQVLKAIRENEPRAVSLGYNVDRHKLLAFVISAALAGLAGSTKTVVFQLASLTDA 257

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            +  +  VI + +LGG+ ++        +++ +                  +        
Sbjct: 258 HWHMSGEVILMTLLGGVGTILGPLVGATVVVTLQSYLS-------------NGPLGEWVH 304

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNF 348
            ++ +   L +L+    ++        
Sbjct: 305 VILGVIFVLCVLLFRSGIVGWLERLVK 331


>gi|221636041|ref|YP_002523917.1| inner-membrane translocator [Thermomicrobium roseum DSM 5159]
 gi|221158192|gb|ACM07310.1| inner-membrane translocator [Thermomicrobium roseum DSM 5159]
          Length = 356

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 108/307 (35%), Gaps = 10/307 (3%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +I     Q  IY + A G ++V G L +++      +  GA +   L      S +L  
Sbjct: 53  DFIVFGIAQGSIYALIALGYTMVYGVLRMINFAHGEVFMSGAMTTFFLADYLNRSGFLKA 112

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                +         +         + +  +    +     +       G +        
Sbjct: 113 HPWISLIAMLLFSGLVSMTI----AVLVERIAYRPLRGAPRLVPLITAVGASFFLQYTFR 168

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G+ VR+            +++     V +G+      ++L+L+RT    A R + ++
Sbjct: 169 GLFGSGVRAYPAIPVLQGKLWVFQKTQIAVFVGVAITLLLLLLFLQRTRAGLAIRAVAED 228

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++A   +   +  A ++ FAV     G+AG  +A    ++   M  F   I   +  +LG
Sbjct: 229 REAAALMGVDVDRAIVTTFAVGGFMAGIAGVLYALVFIQVQFFM-GFLPGIKAFTAAVLG 287

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +L   A    +L  +  +   + F  +        + +     +    L L+++ R 
Sbjct: 288 GIGNLPGAAVGGLVLGIIESVGPSLFFDGYGIR-----AAHQLKDVIAFTILVLILIFRP 342

Query: 337 HSLLRLR 343
             +L  R
Sbjct: 343 TGILGER 349


>gi|212716439|ref|ZP_03324567.1| hypothetical protein BIFCAT_01363 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660692|gb|EEB21267.1| hypothetical protein BIFCAT_01363 [Bifidobacterium catenulatum DSM
           16992]
          Length = 309

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 103/304 (33%), Gaps = 13/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A G ++V G + L++        +GAY   ++ +   +  + L   
Sbjct: 13  IFNGLKIGSVYSLVALGYTMVYGIIRLINFAHGDFIMVGAYV--LMLTIPAIVAFGLPAW 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+I      +     ++                    +     + NG   I+ AD    
Sbjct: 71  VAVIPAILMCVAVGVIVERAAYKPVREKGNSMTALITAIAMSLLLENGSQAIFGAD---- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              TV ++I+        +  +      +     +  ++ L++  T    A R + ++++
Sbjct: 127 -YQTVPTIIQIPTLSLGKLKIDGATIITIALGVIIMVALQLFVSHTKQGKAMRAVSEDKE 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S    +A   +  S  ++S  M      +      +LGG+
Sbjct: 186 ASILMGINVNSTITLTFAIGSGLAAVAALMYCISYPQVS-PMMGAMLGLKAFVAAVLGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  V  L           ++    S       ++   L +V+L++   
Sbjct: 245 GSIPGAMVGGLVIGVVESLTKAYIGTITGGVITSAFSDA-----IVFGILIIVLLVKPSG 299

Query: 339 LLRL 342
           L+  
Sbjct: 300 LMGE 303


>gi|322390029|ref|ZP_08063567.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           parasanguinis ATCC 903]
 gi|321143283|gb|EFX38723.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           parasanguinis ATCC 903]
          Length = 292

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + ++ ++ + +
Sbjct: 8   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDVYMVGAFMGYFLLNSWKVNFFVALLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +       IA LI +     +L        G            
Sbjct: 68  AMVGTAILGVVIEYLAYRPLRHSTRIAALITAIGVSFLLEYGMVFFVGANTRS------- 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I   R+    +        +L    FL  ++   +++T +  A R +  +  
Sbjct: 121 ----FPQVIETVRYNVGPISISNIQLMILGVSIFLMIALQFIIQKTKMGKAMRAVSVDSD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G  G       + I P M   +  I      +LGG+
Sbjct: 177 AAQLMGINVNRTISFTFALGSALAGAGGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +      +               +     ++   L +++L+R   
Sbjct: 236 GIIPGAALGGFVIGLLETFATAIG-------------LSDFRDAIVYAILIVILLIRPAG 282

Query: 339 LLR 341
           +L 
Sbjct: 283 ILG 285


>gi|306846167|ref|ZP_07478729.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO1]
 gi|306273418|gb|EFM55279.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO1]
          Length = 331

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 54/337 (16%), Positives = 129/337 (38%), Gaps = 33/337 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +   L+  +         +     +++L + +FA   ++++G  G+LS      +
Sbjct: 25  LSAVILGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 80

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              AY        +G+S  L + +  + +   G+++G  +++ +G Y  + TL ++++F 
Sbjct: 81  GGAAYVTAHAVKEWGVSPELGLVLGILAAAVLGLVIGYLAIRRQGIYSTMITLALAQMFF 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              ++                       ++ + R F F    +   + MYY +L +  L 
Sbjct: 141 FFCLQASFTHG--------------EDGLQGVPRRFLFGFIDLNQPMNMYYFVLAVFVLG 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              I  +  +      +++R+N+    SL  ++   KL+AF +S+   G+AG   A    
Sbjct: 187 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 246

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             +     +  +  VI + +LGG+ +L       A ++ +       +F           
Sbjct: 247 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 297

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 T +  +     +L+    ++     S   ++
Sbjct: 298 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 328


>gi|307730451|ref|YP_003907675.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|307584986|gb|ADN58384.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
          Length = 475

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 105/306 (34%), Gaps = 27/306 (8%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
           Q ++ +   Q    ++FA   ++++G  GLLS        +GA     + +R+G+ + LL
Sbjct: 56  QSWLLAYLAQTATMIVFALSYNLLLGETGLLSFGHAAYAGLGALIAAHVFNRFGVPLALL 115

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
             V    +  CG ++G  S +  G   A+ TL + E+             G+AG+ +   
Sbjct: 116 PLVGGAGAALCGALLGFISTRRAGTAFAMITLGIGELVAAAAWTLPDWFGGEAGVAI--- 172

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                           F +         Y ++   C L++  +  L RT        +RD
Sbjct: 173 ---------DRASGPAFGAWTFGPAREAYTLIALWCLLASVAMFALTRTPFMRLANAVRD 223

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N     ++       +     +S+ F G+AG     + + +S +      +  V+   ++
Sbjct: 224 NPVRAAAIGCYPRRIRYGVVIMSAFFAGVAGTLALINVELVSTESVSMLRSGSVLIATVI 283

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  +         +L         +   +                  + +   ++++  
Sbjct: 284 GGTGAFFGPVAGAVVLTFFSTAVASVTRAW---------------LFYLGLFFVVIVVAA 328

Query: 336 SHSLLR 341
              L  
Sbjct: 329 PDGLAG 334


>gi|163939782|ref|YP_001644666.1| inner-membrane translocator [Bacillus weihenstephanensis KBAB4]
 gi|229132806|ref|ZP_04261651.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus BDRD-ST196]
 gi|163861979|gb|ABY43038.1| inner-membrane translocator [Bacillus weihenstephanensis KBAB4]
 gi|228650633|gb|EEL06623.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus BDRD-ST196]
          Length = 333

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 58/334 (17%), Positives = 130/334 (38%), Gaps = 31/334 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V+ L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 15  VFMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  R      + ++ I  + ++S     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 75  VALLFDRQGVSITNFFIGIAAAIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YY+          +
Sbjct: 135 EKWRSLTHGGDGFTFRVPDIFRDRF-------------------TFYYITFICLISIFIL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L  +    
Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            R T ++ +   +V+L+    L+         +R
Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGTVKKLKNFKR 320


>gi|206561446|ref|YP_002232211.1| putative branched-chain amino acid transporter permease
           [Burkholderia cenocepacia J2315]
 gi|198037488|emb|CAR53424.1| putative branched-chain amino acid transport system, permease
           component [Burkholderia cenocepacia J2315]
          Length = 371

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 46/347 (13%), Positives = 96/347 (27%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 28  VAIGIGVPLAALVAPEASAFHLSAYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 87

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 88  FALGGYAIGMYLMREIGRDGKYGSDLPDFMVFLDWHQLPWYWSGTQHLAWALALVVLVPA 147

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            Y  +  +          R   F  +
Sbjct: 148 VLAWVFGFFTFRSRVKGVYLSIITQALTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 207

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +  +      L+      +  + +      +RD +     L  + +  KL  +
Sbjct: 208 SPGTRTVLLLLTFATLVLAFIAARAIVTSKLGRVVTAVRDGETRLMFLGYSPLAYKLFVW 267

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+   G+AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 268 TVSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 327

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +                  F       + +   LV L+    ++ L
Sbjct: 328 SVFTAY--------------FAEYWLFFLGLIFVLVPLLLPRGIMGL 360


>gi|163856635|ref|YP_001630933.1| high-affinity branched-chain amino acid transport system, permease
           protein [Bordetella petrii DSM 12804]
 gi|163260363|emb|CAP42665.1| high-affinity branched-chain amino acid transport system, permease
           protein [Bordetella petrii]
          Length = 308

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 47/311 (15%), Positives = 104/311 (33%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G ++V G +G+++      Y IGAY  ++  +            
Sbjct: 12  VFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGTNSGLPLPF 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            I  ++ V+ +++G  G  +   + +       +  LI +      L  W  +  G    
Sbjct: 72  IIAAMLLVAIVVTGVYGFSVERVAYRPVRGSQRLVALISAIGMSIFLQNWVALGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   + + +   ++F       V        +++    L  ++ L+++ + +  A 
Sbjct: 129 ----RDMAVPSLISGSLQFNMGSQFDVTLPYSRIMIIVVTVLLMVALSLFIKYSRMGRAS 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    +      L           F + +    + G   A +  +++     F   I   
Sbjct: 185 RACSQDMHMANLLGIDTNRVISFTFVLGAMLAAVGGVLIAITIGKLN-PFIGFLAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETLAAAYISSQYKDIVAF-------------ALLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|295400900|ref|ZP_06810876.1| urea ABC transporter, permease protein UrtC [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294977163|gb|EFG52765.1| urea ABC transporter, permease protein UrtC [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 357

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 57/345 (16%), Positives = 109/345 (31%), Gaps = 27/345 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           + +   L LF       ++  S+  + L + M A GLS++ G  G+LSL   + + +GAY
Sbjct: 7   LYWLFFLALFAAPFYLTEFRLSLLGKFLCFAMIAIGLSLLWGHTGILSLGHGVYFGLGAY 66

Query: 80  SYVILG---SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
              +     S  G     +                 P        +    L     +   
Sbjct: 67  CMAMYLKLESAPGRLPDFMEWSGVNKLPWFWKPFEHPLFAMSAAIVIPVLLAAFLSYFTF 126

Query: 137 LIKWKPITNGKAGIYVA----------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
             + K +        V                    + +    F F  S  + +I +Y++
Sbjct: 127 KNRIKGVYFSLLSQAVVVVFVTLFIGKQEWTGGTNGLTNFSTVFGFSLSSPLTQIVLYWI 186

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            + +  L      WL  +        IRD +     L       K+  +++S+AF  +AG
Sbjct: 187 TVCLLLLIFLFSRWLTVSRFGRVLVAIRDGENRVRFLGFNPTTYKVFVYSLSAAFAALAG 246

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             F      ISP M     +I ++  V +GG +SL        +                
Sbjct: 247 VMFVLQVGLISPAMMGIIPSIEMVLWVAVGGRSSLIGAVIGAIV--------------TN 292

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           ++   F  ++       +      V++   + L  +       +R
Sbjct: 293 SAKSFFSENYPDIWLLFLGGLFIGVVMFLPNGLAGIYESLKQRKR 337


>gi|123968419|ref|YP_001009277.1| putative membrane protein of urea ABC transport system
           [Prochlorococcus marinus str. AS9601]
 gi|123198529|gb|ABM70170.1| putative membrane protein of urea ABC transport system
           [Prochlorococcus marinus str. AS9601]
          Length = 376

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 46/358 (12%), Positives = 106/358 (29%), Gaps = 35/358 (9%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           MS+  ++ +K      +L+    L+  +    T    +  ++  + L   + A G+ ++ 
Sbjct: 1   MSLSKIKFDKK----IVLSFWIILIALIIAAPTILPVFRLNLLGRYLSLSIVALGVDLIW 56

Query: 61  GSLGLLSLNCVIAYAIGAYSYVIL-----------------GSRYGLSIWLLIPVSAMIS 103
           G  GLLSL   I +A+G Y   +                         +           
Sbjct: 57  GYTGLLSLGQGIFFALGGYCAAMYLQITSSSEFPNNIPEFFALYGVEKLPFFWEPFRSPV 116

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
                I  +P+L        +    +  ++ +IL +   +            +       
Sbjct: 117 FTFFAIWIIPALVAGLIGFLVFRNRIKGVYFSILTQASLLVFFNFFNGQQKLINGTNGLK 176

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
             + + F         +   +++   +   +     W+ +    N    IRD++      
Sbjct: 177 TDVTQLFGQMVGSESMQRIFFWITAILVIAAWFFAKWVVKGRFGNILIGIRDDEPRVRFT 236

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
               +  K   F+++    G++GA +      +SP       +I ++  V +GG  +L  
Sbjct: 237 GYNPVIFKTIIFSIAGGLAGISGALYTVQSGIVSPQFMTVPFSIEMVIWVAVGGRGTLLG 296

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  +     L                 +       +      LV+      +L 
Sbjct: 297 AILGAVFINYAKSLVSE--------------ALPASWMFIQGGLFILVVTALPEGVLG 340


>gi|330867110|gb|EGH01819.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330870998|gb|EGH05707.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. aesculi str. 0893_23]
          Length = 544

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 271 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAVIGMA 330

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 331 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 388

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 389 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 448

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 449 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 506

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 507 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 541


>gi|229588138|ref|YP_002870257.1| putative amino acid ABC transporter permease [Pseudomonas
           fluorescens SBW25]
 gi|229360004|emb|CAY46858.1| putative amino acid ABC transport system, permease [Pseudomonas
           fluorescens SBW25]
          Length = 502

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 79/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++       +   I    +I+      +       
Sbjct: 229 ITFGLLGVINMAHGEMLMLGAYSTYVVQMLMQRYVPAAIEFYPLIALPVAFFVTAAIGMA 288

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      +  +  + +         +
Sbjct: 289 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRLVFGAQNVEVSNPAWLSGGIQVLPNL 346

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++     +     L L +T +    R +  N+              + AF +
Sbjct: 347 VLPYNRIVIIAFALCVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRVDMLAFGL 406

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 407 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 464

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 465 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 499


>gi|293605598|ref|ZP_06687978.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292815978|gb|EFF75079.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 308

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 47/311 (15%), Positives = 100/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
             +      IY + A G ++V G +G+++      Y IGAY  ++  +            
Sbjct: 12  FFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTSIGTNSGLPVPF 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            I  ++ V+  ++G  G  +   + +       +  LI +      L  W  +  G    
Sbjct: 72  IIAAMLLVAITVTGIYGFSVERVAYRPVRGSPRLVALISAIGMSIFLQNWVALGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   + + V   ++F       V        +++    L   + L+++ + +  A 
Sbjct: 129 ----RDMAVPSLVSGAVQFHMGTDFDVTVPYSRIMIIVVTVVLMIGLTLFIKYSRMGRAS 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    +      L           F + +    + G   A +  +++     F   I   
Sbjct: 185 RACSQDMHMANLLGIDTNRVISFTFVMGAILAAVGGVLIAITIGKLN-PFIGFLAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L              +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAAYISSQYKDIVAFS-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|146278752|ref|YP_001168911.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025]
 gi|145556993|gb|ABP71606.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025]
          Length = 310

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 66/326 (20%), Positives = 119/326 (36%), Gaps = 28/326 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++A+   +L  L         Y  +   +I++   +A G +I  G  GLLSL   + +A 
Sbjct: 3   MIALHLAVLAVLAALQFVLPAYHHTNAARIMVLATYAIGFNIAFGYSGLLSLGHALFFAG 62

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G Y+  +L  + G   WL +    +  GA    +GL +L+  G    I TL+ ++ F   
Sbjct: 63  GMYATGLLVDQGGWQPWLALVAGPLAGGALAAAVGLLALRTAGPAFMIVTLMFAQAFHLA 122

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           ++ W   T G  G                     R  +  +      Y     +   +  
Sbjct: 123 ILYWGRFTGGDEG-------------FTLSGAARRIGAFDLADPATRYTAAFLLFGAAML 169

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
             L L R+        +R+N++    L      AKL A A+S    G AGA +      +
Sbjct: 170 GCLALARSRTGRVLVAVRENEERTRMLGYDTFRAKLFALALSGLISGAAGATYGLMFGYV 229

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
                    +I+ +  V+LGG  ++      TA++  +++    +               
Sbjct: 230 GGSFASIQYSILPLIWVLLGGAGTVLGPLLGTALMFYLIDWASSV--------------- 274

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
                 ++   L L++L     LL L
Sbjct: 275 TTASQFVVGAVLILLVLFAPRGLLGL 300


>gi|71908383|ref|YP_285970.1| inner-membrane translocator [Dechloromonas aromatica RCB]
 gi|71848004|gb|AAZ47500.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Dechloromonas aromatica RCB]
          Length = 320

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 61/311 (19%), Positives = 123/311 (39%), Gaps = 26/311 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                + +   +  + L+  +FA  L ++VG  GL+S      + + AY+   L  +Y  
Sbjct: 18  VPLTGESFYTELIAKTLVLAIFAMSLDLLVGFTGLVSFGHAAYFGVAAYAVAQLSPKYEA 77

Query: 91  -SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
            S+W ++P +  IS    + +GL  L+ +G Y  + TL         +    P+  G  G
Sbjct: 78  ASLWFVMPAAVGISALVALFVGLFVLRTKGIYFIMVTLAF-AQLAFFVFHDTPLGGGSDG 136

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           IY+  +                +    +  +  +YY +L M  L    +  + ++     
Sbjct: 137 IYLNVKPT---------ASIAGWMPFDLDNQTHLYYFILAMLVLVYLFLGRILQSPFGRV 187

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              I+ N+    S+       KL+AFA++    G+AG  +A     ++P++  + ++  V
Sbjct: 188 LVGIKSNEHRMQSMGYLTFRYKLAAFALAGGLGGIAGFLYAVVFGFVTPELLSWHQSGNV 247

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           + +VILGGM +L        +  G+ E+    + ++                 +M   + 
Sbjct: 248 LLMVILGGMGNLVGAIAGAFVFTGMQEVFGTWSKHW---------------QLIMGGVIV 292

Query: 330 LVILMRSHSLL 340
             +L     L 
Sbjct: 293 AAVLFLPGGLA 303


>gi|134294220|ref|YP_001117955.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|134137377|gb|ABO53120.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia vietnamiensis G4]
          Length = 324

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 50/302 (16%), Positives = 124/302 (41%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS    +  A   Y+        G +  L +    +
Sbjct: 26  FVMKVLTFALFAAAFNLLIGYTGLLSFGHAMFLASAGYATGYTIQTLGFTPELGVLAGTV 85

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+++GL +++ +G Y A+ TL  +++   I ++                      
Sbjct: 86  AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 131

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  ++ +YYV+L +   + + I+ +  +        I++N+    
Sbjct: 132 GLQGVPRGHLFGVLDLSNDVTLYYVVLAVIVAACAFIVRVVHSPFGQVLVAIKENEPRAI 191

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+   G+AGA         +     ++ + +V+ + ++GGM +L
Sbjct: 192 SLGYDTDRFKLLAFILSAGLAGLAGALKVLVLGFETLSDAYWTMSGLVVLMTLVGGMGTL 251

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +    +  +  + + + +  S     T +  +     +L     ++
Sbjct: 252 FGPLLGAALIVALEDRLGDIGEWLASLTGVGWFHSLGESATIVTGLIFIACVLAFRRGIV 311

Query: 341 RL 342
             
Sbjct: 312 GE 313


>gi|224825878|ref|ZP_03698982.1| inner-membrane translocator [Lutiella nitroferrum 2002]
 gi|224602102|gb|EEG08281.1| inner-membrane translocator [Lutiella nitroferrum 2002]
          Length = 309

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 99/305 (32%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   IY + A G ++V G +GL++        +GA   + + +    +   L   
Sbjct: 8   ILNGLVLGSIYALIALGYTMVYGIMGLINFAHGEVVMMGAMVTITVVTSLMGAGVNLPGP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ G    I     L +  + +A   L  +     ++                     
Sbjct: 68  ILVLIGLVIAIPACALLGYTIERVAYRPLRNAPRLAPLITAIGLSI--VLQQVAILIWGR 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S++             +    +++    + A +++ + +T +  A R    N  
Sbjct: 126 NYIPFPSILSHDTVEIFGASITVLQIMIIVLCLVIMAGLLIMVEKTKLGRAMRATSQNPG 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +     S F + SA   +AG   A + D+    M  F   +   +  +LGG+
Sbjct: 186 VASLMGVNVNTIISSTFMLGSALGAIAGVMVATNYDQAHYYM-GFLIGLKAFTAAVLGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L  +  L  G         L      +        + L LV++ R   
Sbjct: 245 GNLGGAVAGGILLGIIESLGAGYIGTLTGGFLG-----SHYQDIFAFMVLILVLIFRPSG 299

Query: 339 LLRLR 343
           LL  +
Sbjct: 300 LLGEK 304


>gi|144227524|gb|AAZ44317.2| putative ribose ABC transporter [Mycoplasma hyopneumoniae J]
          Length = 604

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 99/323 (30%), Gaps = 27/323 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            K+L L  ++  +   L +    S  +  ++    +     A G ++V+   G + L+  
Sbjct: 288 TKLLILFLIIAFITGALNVNFFSSYNWFVAILKNNIFIGFIALGQTLVI-LTGGIDLSVG 346

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                GA  Y++L  + GL    ++ +  +I  A G++ G+   KF+     +    +  
Sbjct: 347 SLIGFGATIYLLLTVKLGLHFVAVLFILIIILAAIGILNGILISKFKIPPFIVTLAGLLS 406

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +   I I  K                    T  +  +   F             ++L   
Sbjct: 407 LRGAIAILLKG-------------------TPITNAQDPIFNFFNYNLGSNFSVLVLVFI 447

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
              A +I +++ +        + DN  A            +  +  S  F  + GA   +
Sbjct: 448 ITVAVLIFFIKFSKFGRYVYAVGDNPVAATFSGIKNNKILILVYMFSGIFA-ILGALSIS 506

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           S          +   +  ++ V+LGG       A           +          +   
Sbjct: 507 SGTTSVSPNTGYGFELDTVTAVVLGG------TALTGGKGGVGKTIIGWFAMALLLNTFS 560

Query: 312 FDCSFNMRHTTLMVIALFLVILM 334
           F    +        I + L IL 
Sbjct: 561 FFQLDSNFQLVAKGIIIVLAILF 583


>gi|83950627|ref|ZP_00959360.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
 gi|83838526|gb|EAP77822.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
          Length = 314

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 61/327 (18%), Positives = 108/327 (33%), Gaps = 28/327 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L+  LF        Y      +I++   +A G +I+ G  GLLSL   + +A G Y  
Sbjct: 12  LGLIAVLFALQFLLPAYHHGNLARIMVLASYAVGYNILFGYTGLLSLGHALFFAAGMYGM 71

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +     GLS    + +         + +GL +L+  G    I TL+ ++     ++ + 
Sbjct: 72  GLGIQHGGLSPAPALVLGIGAGAVVSLALGLLALRTSGVAFMIVTLMFAQAGYLTILYFG 131

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
             T G  G                           +      Y+  L +      + LWL
Sbjct: 132 EYTRGDEG-------------FVIQSAQRVLWGIDLSEPSNRYFAALVLFAACLLLSLWL 178

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R         IR+N++    L       KL A  +S      AGAF+            
Sbjct: 179 IRRPFGRTLIAIRENEERVRMLGYDTQAHKLGAMVISGTISAAAGAFYGLLFGYAGASFG 238

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
               +I+ +  V+LGG  ++         +  +++L  G+                  H 
Sbjct: 239 AVPHSILPLLYVLLGGAGTILGPFMGALFMFYLIDLSSGV---------------TTAHM 283

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNF 348
            +  +AL L+ L     ++       F
Sbjct: 284 LIAGVALVLLTLFAPQGIMGELRRRAF 310


>gi|253999649|ref|YP_003051712.1| inner-membrane translocator [Methylovorus sp. SIP3-4]
 gi|313201690|ref|YP_004040348.1| inner-membrane translocator [Methylovorus sp. MP688]
 gi|253986328|gb|ACT51185.1| inner-membrane translocator [Methylovorus sp. SIP3-4]
 gi|312441006|gb|ADQ85112.1| inner-membrane translocator [Methylovorus sp. MP688]
          Length = 355

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 67/333 (20%), Positives = 129/333 (38%), Gaps = 16/333 (4%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  +  F  +    +  +  ++ +  L+  +   GL+++ G  G LSL      A+GA++
Sbjct: 31  LLLVFAFAVVPFIANDYWFSAILVPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMAVGAFA 90

Query: 81  YV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                    GL   L   +  + +   G++ GLPSL+ +G YL ++TL      Q +L  
Sbjct: 91  AYNFHLRIEGLPFLLSFVLGGITAAGVGILFGLPSLRIKGFYLLVSTLAAQFFVQWVLTS 150

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           +   +N  +   +      +     S                  Y + L +    A +  
Sbjct: 151 FGWFSNNNSSGVITAPPLLVFGRDFS-------------SPAGRYLLTLAVVVALALLAR 197

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRISP 258
            + R+ +   W  +RD   A   +   I+  KL AFA+SS F+G+AGA +A      + P
Sbjct: 198 NIVRSELGRHWMAVRDMDTAAAVIGIPILKTKLLAFAISSFFLGVAGALWAFTYLGTVEP 257

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F  + +  ++ I+I+GGM S+       A ++ +  L   ++      L+        
Sbjct: 258 HGFDLTRSFQILFIIIIGGMGSILGNFLGAAFIVLLPILLSNLSGTVLAGLIDPG-QLEN 316

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               +    +   ++     L RL        R
Sbjct: 317 LQKIIFGGLIVFFLIKEPFGLARLWQNFRERSR 349


>gi|306841315|ref|ZP_07474024.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO2]
 gi|306288618|gb|EFM59954.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO2]
          Length = 331

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 130/337 (38%), Gaps = 33/337 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +   L+  +         +     +++L + +FA   ++++G  G+LS      +
Sbjct: 25  LSAVILGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 80

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              AY        +G+S  L + +  + + A G+++G  +++ +G Y  + TL ++++F 
Sbjct: 81  GGAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              ++                       ++ + R F F    +   + MYY +L +  L 
Sbjct: 141 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              I  +  +      +++R+N+    SL  ++   KL+AF +S+   G+AG   A    
Sbjct: 187 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 246

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             +     +  +  VI + +LGG+ +L       A ++ +       +F           
Sbjct: 247 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 297

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 T +  +     +L+    ++     S   ++
Sbjct: 298 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 328


>gi|16265226|ref|NP_438018.1| putative branched-chain amino acid uptake ABC transporter permease
           protein [Sinorhizobium meliloti 1021]
 gi|15141366|emb|CAC49878.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
          Length = 333

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 113/334 (33%), Gaps = 27/334 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
                ++L L            ++  +I    +    L +V G  G+ +L     +  GA
Sbjct: 22  LAGLAVILVLAGIGYLLFPNNLALLTRITAIALLVLSLDLVTGYCGVATLGHAALFGSGA 81

Query: 79  YSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           Y+  I    +      L++    +     G+  G+  L+  G    + ++ +  +F    
Sbjct: 82  YAAGIAAVHFGITDPLLMLAAGILGGALAGLACGVVILRAHGLPQLVLSIALIHLFHEFA 141

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            K    T G  G+        +G              +F ++    Y   + +  +   +
Sbjct: 142 NKASSWTGGSDGLAGISPDPLIGL------------FAFDLWGRTAYVFGVVLLAIVFVL 189

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  + R+      R IR++     ++  +   A L  + +S A  G+ GA  A S   + 
Sbjct: 190 LRLVVRSPFGMLCRGIREDPTRIRAMGASPTIALLKMYVISGAVAGVGGALNAVSTQVVG 249

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            D   F+ +   + +++LGG  SL      T + +   +L    N +++           
Sbjct: 250 LDSLSFTLSAESLVMLVLGGTGSLFGALTGTIVFMFFEDLVSTANPFHW----------- 298

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               T++   L  V+L     L           R
Sbjct: 299 ---LTMVGALLIAVVLFAPKGLYGTVAEVLARRR 329


>gi|327482356|gb|AEA85666.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas stutzeri DSM 4166]
          Length = 523

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 78/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY+  ++           +    +++      +       
Sbjct: 250 ITFGLLGVINMAHGEMLMLGAYTTYMVQVLMARLAPEALAFYPLVALPVAFFVTAAIGMA 309

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + V      +     + +         +
Sbjct: 310 LER--TVIRHLYGRPLETLLATWGISLILIQLVRVLFGAQNVEVANPAWLSGGLQVLPNL 367

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 368 VLPYNRMVIIGFALFVVLLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 427

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 428 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSIFAAFGLGIANKI 485

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 486 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 520


>gi|146284033|ref|YP_001174186.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas stutzeri A1501]
 gi|145572238|gb|ABP81344.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas stutzeri A1501]
          Length = 523

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 78/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY+  ++           +    +++      +       
Sbjct: 250 ITFGLLGVINMAHGEMLMLGAYTTYMVQVLMARLAPEALAFYPLVALPVAFFVTAAIGMA 309

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + V      +     + +         +
Sbjct: 310 LER--TVIRHLYGRPLETLLATWGISLILIQLVRVLFGAQNVEVANPAWLSGGLQVLPNL 367

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 368 VLPYNRMVIIGFALFVVLLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 427

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 428 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSIFAAFGLGIANKI 485

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 486 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 520


>gi|33597862|ref|NP_885505.1| putative branched-chain amino acid transport permease [Bordetella
           parapertussis 12822]
 gi|33574291|emb|CAE38624.1| putative branched-chain amino acid transport permease [Bordetella
           parapertussis]
          Length = 323

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 57/336 (16%), Positives = 126/336 (37%), Gaps = 26/336 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +N+        A+V  +L ++ +             ++++ Y +FA   ++++G  GLLS
Sbjct: 1   MNRQLLGYAAFAIVVGILPYVGVYPIF--------AMKVMCYALFACAFNLLLGYTGLLS 52

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                     AY+       +GL   L +     ++   G+ MG  +++  G Y A+ TL
Sbjct: 53  FGHAAFLGSAAYAAGYALKVWGLPTELGLAFGVAVAALLGLAMGALAIRRSGIYFAMITL 112

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                           T G+ G+    R                  +  +  ++ +YYV+
Sbjct: 113 A----QMVFFFLQAHFTGGEDGLQGVPRGT-------------LLGTIDLRNDLNLYYVV 155

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +G+  L   +I     +      + +R+N+    SL   +   KL AF +S+A  G+AGA
Sbjct: 156 MGIFALGYFVIWRTVHSPFGQVLKGLRENEPRAISLGYDVDRFKLVAFVLSAAIAGLAGA 215

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
                    +     +  + +VI + ++GG+ +L+       I++ +             
Sbjct: 216 TKTLVFVSATLSDATWQMSGLVILMTLIGGLGTLTGPILGAFIVVLLENKVGDFGQMLTR 275

Query: 308 -SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            + L +        T ++ +   + ++     ++  
Sbjct: 276 LTGLDWFLRLGESVTIVIGLIFVVCVMAFRRGIVGE 311


>gi|111219823|ref|YP_710617.1| putative branched chain amino acid ABC transporter ATP-binding
           protein [Frankia alni ACN14a]
 gi|111147355|emb|CAJ59006.1| putative branched chain amino acid ABC transporter ATP-binding
           protein [Frankia alni ACN14a]
          Length = 940

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 57/312 (18%), Positives = 111/312 (35%), Gaps = 21/312 (6%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                    +     +I  +      +V G  G +SL  +    +GA     L + +G  
Sbjct: 317 WWLLPAAWVNALGLQMIVGVILLSFVVVTGYAGQVSLVQIGFAGVGALMTAWLVADHGWP 376

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            WL      +     G+++GL  L+ RG +LAI TL ++   + ++      T G  G  
Sbjct: 377 FWLAAVAGVLAVVPVGIVVGLGGLRTRGVHLAILTLGLAISLEAVVFGNPRYTGGTEGYQ 436

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           V              IR        + +      ++L +  + A  I+ LRR+       
Sbjct: 437 V------------GAIRVAGLAVDALSFPKRYASLVLAVLVVVALAIVNLRRSRAGRRLI 484

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R N++A  +L  +++ AKL AF +      + G   A      S   F   +++  + 
Sbjct: 485 AVRTNERAAAALGISVVGAKLYAFVLGGMIASLGGILLAFHDPVPSFGAFAGLQSVTALQ 544

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             +LGG+ + +     +       E      F +  + +    +          + L  +
Sbjct: 545 NAVLGGVGATTGPLVGS---SFAPETLGQQIFSFLGAKVALYLALAS------GVGLLFM 595

Query: 332 ILMRSHSLLRLR 343
           +      L+ LR
Sbjct: 596 LTSAPDGLVFLR 607



 Score = 40.6 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 86/267 (32%), Gaps = 15/267 (5%)

Query: 54  WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113
            GL +V    G+++        +GAY     G    L   + + +  + +   G    L 
Sbjct: 23  VGLVLVHRGSGVVNFAQGAMGMVGAYV-YFEGRGADLPDAVSVVLGLLAAAVLGAAFHLL 81

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
            L+       +A ++ +     +L     +  G            L   + S++      
Sbjct: 82  ILRRMRGASGLARIVATLALLVVLQSVAVLRYG-----------DLPKVIPSMLPIRPVS 130

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
                      Y+L  +  L+A++    R T    A   + +N ++  +L  +      +
Sbjct: 131 VFGAQIGRDRLYILAIVVVLTAALWAVYRFTRFGVATSAVAENSRSAAALGVSPDLIGAA 190

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            +A+ +A   +A    A        ++      I V++  ++G   S      A  ++  
Sbjct: 191 NWAIGAALGALAAILLAPITGLGPANLTYLV--IPVLAAAVVGRFASFPITLAAGLVIGI 248

Query: 294 VV-ELCCGMNFYYFNSLLKFDCSFNMR 319
              E+   +      + + F     + 
Sbjct: 249 GQSEVTRYVTAPGLATAIPFVLVAVVL 275


>gi|328542696|ref|YP_004302805.1| High-affinity branched-chain amino acid transporter permease
           [polymorphum gilvum SL003B-26A1]
 gi|326412442|gb|ADZ69505.1| High-affinity branched-chain amino acid transport system permease
           protein [Polymorphum gilvum SL003B-26A1]
          Length = 350

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 61/325 (18%), Positives = 121/325 (37%), Gaps = 16/325 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
                  L+  L      S  Y+  +   + I +M  +GL + VG  G +++       I
Sbjct: 23  AGLWAAALVAGLIALPLASGPYLLGVMTHMFITLMAVYGLYVTVGMAGQINIAQSAFVGI 82

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA++     S YGL +W+++P +A+++GA  ++  LP+ + +G YLA+ TL    +F  +
Sbjct: 83  GAFTAA-KLSGYGLPVWVIVPAAALVTGAISVLFALPAARVKGFYLALTTLAAQVMFPIV 141

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           ++       G       + +              R     +   +  YY  L +  +   
Sbjct: 142 ILALPMDWLGGLVGLSVEPV--------------RLGGLTLTTPLHYYYFTLVLAAVLTV 187

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               L+R+    +   +RDN      +   +   K+ AF   S F G+AGA  A     +
Sbjct: 188 AAFNLQRSRFGRSLMAVRDNDVVAEVMGIPVFRTKILAFFAGSLFAGVAGACTAYVLQFV 247

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCS 315
           +   F    ++  + ++I+GG  S          +  V E   G+               
Sbjct: 248 TVSSFTLFASVWYLGMLIVGGAHSALGAVLGVVFITLVQEGLHGVANKVVQAGAATSGGM 307

Query: 316 FNMRHTTLMVIALFLVILMRSHSLL 340
                +  +   + + ++     L 
Sbjct: 308 LFALTSIALGGCILIALIFEPRGLA 332


>gi|254788092|ref|YP_003075521.1| urea ABC transporter permease UrtC [Teredinibacter turnerae T7901]
 gi|237685522|gb|ACR12786.1| urea ABC transporter, permease protein UrtC [Teredinibacter
           turnerae T7901]
          Length = 380

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 92/348 (26%), Gaps = 36/348 (10%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L++ V   ++   +    +  +  ++  + L Y   A GL +  G  G+LSL   + + +
Sbjct: 15  LISFVVLAVVIFIVMPLCTDIFRLNLIGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFGL 74

Query: 77  GAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           G Y   +                       +                          +  
Sbjct: 75  GGYCMAMFLKLEASTPEATKIQSTPGIPDFMDWNQLTELPWFWEPFHSLPFTIIAVLVVP 134

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPS 174
                         +   +        +A  L  L    +                 +  
Sbjct: 135 TIFAYIIGVAMFKRRVGGVYFAIITQAIASILTILIIGQQGYTGGVNGITDLRTLLGWDI 194

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                +  +Y+V   + F       ++R++ +      +R+ +         +   K   
Sbjct: 195 RTDSAKYVLYFVNGILLFACLLFAQFVRKSKLGRILLAMREREDRVRFSGYDVSNFKTFV 254

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F + +AF  + GA F      +SP       +I ++    +GG  S+      T ++   
Sbjct: 255 FCMGAAFSAIGGAMFTLQVGFMSPSFVGIVPSIELVIFCAVGGRMSIIGAVYGTLLINWA 314

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                            F  SF       M      V++     L  L
Sbjct: 315 KT--------------TFSESFPELWLFAMGALFIGVVMAFPSGLAGL 348


>gi|255283100|ref|ZP_05347655.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Bryantella formatexigens DSM 14469]
 gi|255266402|gb|EET59607.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Bryantella formatexigens DSM 14469]
          Length = 294

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 98/307 (31%), Gaps = 24/307 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+        IY + A G ++V G   +L+        +GA+  +   ++ GLS  L I
Sbjct: 5   SYLKDGISLGSIYAIIALGYTMVYGIAKMLNFAHGDVIMVGAFVILTAVTKAGLSPLLSI 64

Query: 97  PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
            ++ ++    G+++   +    R     +A LI +     +L     +  G         
Sbjct: 65  LLAVVLCTVLGVVIEAVAYRPLRKASSNLAVLITAIGVSYLLQNLALLIFGADAKSFVTV 124

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           +      +             +  +      +     +  ++  ++ +T    A + + +
Sbjct: 125 IDVPTLVLFD---------GQLTIKGITIVTIAACIIIMCALTFFVNKTKPGRAMQAVSE 175

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A   +   +       FA+ S    +AG    ++   ++P        I      + 
Sbjct: 176 DRDAAQLMGVNVNSTISLTFAIGSGLAAIAGLLLCSAYPTLTPYT-GAMPGIKAFVAAVF 234

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S+        +L  +                            ++   L +V+L++
Sbjct: 235 GGIGSIPGAMIGGILLGVIEIFGKAYISSQVADA-------------IVFAVLIVVLLVK 281

Query: 336 SHSLLRL 342
              L   
Sbjct: 282 PTGLFGR 288


>gi|254470608|ref|ZP_05084012.1| inner-membrane translocator [Pseudovibrio sp. JE062]
 gi|211960919|gb|EEA96115.1| inner-membrane translocator [Pseudovibrio sp. JE062]
          Length = 311

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 99/314 (31%), Gaps = 28/314 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-----------SYVILGSR 87
           + +      IY + A G ++V G +G+++      + +G++           +       
Sbjct: 8   LINGVTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMVGSFVALILIVALGITAATPVLL 67

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             L++ L++ V+  ++   G  +   + +       +A LI +      L  +  ++ G 
Sbjct: 68  LILALALVLVVAMALTAVWGWTVERIAYRPLRGSFRLAPLITAIGASIALQNFVQVSQGA 127

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
               +   +               F  +    +I    +++    L       +  T + 
Sbjct: 128 KNKPLQPLISGGFQLTDGGADGSGFIVNLSYVQI---LIVVTTVILMVGFTYLINNTNLG 184

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
            + R    ++K    L   +       F + ++   +AG  F      +      F   +
Sbjct: 185 RSQRACEQDRKMAALLGVNVDRTISLTFVMGASLAAVAGLMFLLYYGVVDFY-IGFLAGV 243

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              +  +LGG+ SL        ++  +     G     +  +  F               
Sbjct: 244 KAFTAAVLGGIGSLPGAMLGGLLIGLIETFWSGYFSVEYKDVAAFS-------------I 290

Query: 328 LFLVILMRSHSLLR 341
           L +V++     LL 
Sbjct: 291 LAIVLIFMPEGLLG 304


>gi|293603384|ref|ZP_06685812.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292818294|gb|EFF77347.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 321

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 51/326 (15%), Positives = 117/326 (35%), Gaps = 32/326 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  LL+         Q       +++L + +FA   +++ G  GL+S      +    Y
Sbjct: 10  ILALLLVPALFVPFFPQVVYPVFVMKVLCFALFALAFNLLTGFTGLVSFGHAAFFGWAGY 69

Query: 80  SYVILGSRYGLSIW---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           +   +   +G       + I     ++ A G  +G  +++  G Y A+ TL +S++   +
Sbjct: 70  ATGEMMILFGARGLPPEIAIVCGVAMAAAIGYAIGWLAIRRTGIYFAMITLALSQVAYFM 129

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            ++                       ++ + R        +  +  MYY  LG+  L   
Sbjct: 130 AVQVGWTRG--------------EDGMQGIARGKFLGLVDLSVDTNMYYFTLGVFVLGFL 175

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  +  +      +TIRDN     SL       KL AF +S++  G+AG+  A     +
Sbjct: 176 FVYRVIHSPFGQVLKTIRDNAPRAISLGYDTDRCKLLAFVLSASVAGLAGSLKALVLQLV 235

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +    + +  V+ + +LGG+ ++        +++ +      +               
Sbjct: 236 ALNDVSLATSTEVLLMTLLGGIGTVWGPVVGATLVVSLQNYLATLGDVV----------- 284

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
               T ++ +   L +       +  
Sbjct: 285 ----TIVIGLIFVLCVSFFRRGFVGE 306


>gi|262202785|ref|YP_003273993.1| inner-membrane translocator [Gordonia bronchialis DSM 43247]
 gi|262086132|gb|ACY22100.1| inner-membrane translocator [Gordonia bronchialis DSM 43247]
          Length = 446

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 95/308 (30%), Gaps = 25/308 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  LI  +   GLS++ G+ GL +        +GA    ++  + G+ +     ++
Sbjct: 160 IDGLRFGLIIAITGVGLSLIFGTTGLTNFAHGELVTLGAVIAWVINVKLGVQLIPATIIA 219

Query: 100 AMISGACGMIMGL-PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            +I    G++  L      R     +  +++  I   ++I++  +               
Sbjct: 220 VVIGVGVGIVNELGLWRPLRRRRTGLVAMLVVSIGLALVIRYLILMF----------FSD 269

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                       +  S            ++       ++ + L++T I  A R + DN+ 
Sbjct: 270 RSEPFADYQVQTQIGSGAFAITPVNLACIIISLVTLLAVAVMLQKTRIGKAMRAVADNRD 329

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS-RDRISPDMFKFSENIIVISIVILGG 277
              S    +    L  + ++     + G  FA S           F   +++ + + LGG
Sbjct: 330 LAESSGINVDRVILFVWGLAGGLATLGGVLFALSELGGRVQWEMGFKLLLLMFAGITLGG 389

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + +         I+  VV+L   +       +        +                R  
Sbjct: 390 LGTAYGALLGCVIVGLVVQLSTYVLSPDLKYIGGLLILIVILTI-------------RPQ 436

Query: 338 SLLRLRTP 345
            +L  R  
Sbjct: 437 GILGSRAR 444


>gi|114328498|ref|YP_745655.1| amide-urea transport system permease [Granulibacter bethesdensis
           CGDNIH1]
 gi|114316672|gb|ABI62732.1| amide-urea transport system permease protein [Granulibacter
           bethesdensis CGDNIH1]
          Length = 381

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 51/348 (14%), Positives = 99/348 (28%), Gaps = 36/348 (10%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L +     L L +       +  ++  + L Y   A GL +  G  G+LSL   + + +
Sbjct: 11  ILCIGLFAFLILVVFPLGLDTFRLNLFGKYLTYGFVALGLVLCWGDAGILSLGQGVFFGL 70

Query: 77  GAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           G Y   +                       +                  +          
Sbjct: 71  GGYCMAMYLKLESSTPEATKIQSTPGIPDFMDWNQITSLPWFWKPFHSLAFTIFAVPAVP 130

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPS 174
             L +         +            +A  L  L    +              F  +  
Sbjct: 131 MVLALVIAIAMFRRRVGGTYFAIITQAIAAILTILIIGQQGYTGGVNGITDLRSFHGWDI 190

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                   +Y+V  G+   S  ++ ++RR+ +      +RD +         +   K+ A
Sbjct: 191 RTDHARNVLYFVCCGLLLGSLILLQFIRRSKLGRILLAMRDREDRVRFSGYDVASFKIFA 250

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F V++A  G+ GA F      +SP       +I ++    +GG TSL      T ++   
Sbjct: 251 FCVAAALAGVGGAMFTLQVGFMSPSFVGIVPSIEMVIFAAVGGRTSLLGALYGTLLVNWA 310

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                               +F       M     +V ++  + L  L
Sbjct: 311 RSTLSE--------------AFPNAWLFAMGALFIIVTMVFPNGLAGL 344


>gi|88798004|ref|ZP_01113591.1| ABC-type branched-chain amino acid transport system, permease
           component [Reinekea sp. MED297]
 gi|88779201|gb|EAR10389.1| ABC-type branched-chain amino acid transport system, permease
           component [Reinekea sp. MED297]
          Length = 382

 Score = 83.0 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 51/348 (14%), Positives = 96/348 (27%), Gaps = 33/348 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  L      LLF          Y  ++  + L Y M A  + +V G  G+LSL     
Sbjct: 27  LLVTLFASVGNLLFTEGSVFHVSTYTITLLGKYLCYAMLALAVDVVWGYCGILSLGHAAF 86

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +A+G Y   +   R      +                 LP   F  D+   A L+   + 
Sbjct: 87  FALGGYGMGMYLMRQIGDRGVYGNPILPDFMVFLNWEQLPWYWFGFDHFGFALLMALLVP 146

Query: 134 QNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPS 174
             +   +  +                          +  +  +     +        F  
Sbjct: 147 GLLAFVFGWLAFRSRVTGVYLSIMTQALTYALMLAFFRNEMGFGGNNGLTDFKDILGFDL 206

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                 + ++ +      L+      +  +        +RD +     L       K+  
Sbjct: 207 QSDTTRVALFAITAFCLSLTLLASHAIMTSRFGKVIIALRDTESRSRFLGYRTERYKVWL 266

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F  S+    +AGA +      I+P  F    +I V+  V +GG  +L        ++   
Sbjct: 267 FVYSAVVAALAGALYVPQIGIINPGEFAPLNSIEVVIWVAIGGRGTLVGAVLGALLVNYA 326

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 +              F       +     LV L     L+ +
Sbjct: 327 KTRLTAI--------------FPDAWLFALGALFVLVTLFLPKGLIGM 360


>gi|325568962|ref|ZP_08145255.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Enterococcus
           casseliflavus ATCC 12755]
 gi|325158000|gb|EGC70156.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Enterococcus
           casseliflavus ATCC 12755]
          Length = 305

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 101/303 (33%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y IG++    L +++ L  +  + +
Sbjct: 21  LINGLFLGSIYALLALGYTMVYGIIKLINFAHGEVYMIGSFIGYFLINQWQLGFFPALFI 80

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S + S A G+ +   + +   +   I+ LI +      L                     
Sbjct: 81  SMIASAALGVTIEFLAYRPLRNSTRISALITAIGVSYFLQNVMIFFFSAN---------- 130

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    +   FV        +L     L   + L +++T +  A R +  +  
Sbjct: 131 -VRPFPQAIERKTYSIGFVQVSNVQLLILAVSVTLMILLQLIVKKTRMGKAMRAVSVDAD 189

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA     G       + I P M      +      +LGG+
Sbjct: 190 AARLMGINVNRTISFTFALGSALAAAGGMLIGLYYNSIDPSM-GVVPGLKSFVAAVLGGI 248

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  V      +              F+     L+ + L +++L+R   
Sbjct: 249 GIIPGAALGGFVIGLVETAATALG-------------FSDYKDALVYVILIIILLVRPAG 295

Query: 339 LLR 341
           +L 
Sbjct: 296 ILG 298


>gi|298292371|ref|YP_003694310.1| inner-membrane translocator [Starkeya novella DSM 506]
 gi|296928882|gb|ADH89691.1| inner-membrane translocator [Starkeya novella DSM 506]
          Length = 338

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 58/338 (17%), Positives = 129/338 (38%), Gaps = 29/338 (8%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
             +  +   +  LL ++  +    F        Y  ++ +      +   G +++ G  G
Sbjct: 16  PSKATRASGLWALLVILAAMAALPFFA----STYTLTLMVPFFALAIALLGFNLLFGYTG 71

Query: 65  LLSLNCVIAYAIGAYSYVILGSR-YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           LLS    +   IGAY+  ++ S+    S  L++ VS ++S    + +G   +++   +  
Sbjct: 72  LLSFGHAMFLGIGAYTAAVMTSKLGVQSFELILLVSILVSVIIAIPVGFLCVRYTRIFFG 131

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           + TL    +F ++L K+  +T G  G+ V   L F          F              
Sbjct: 132 MLTLAFGMLFHSVLYKFYGLTGGDQGMRVLRPLLFGMEFEGGKTAF---------LTGPF 182

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           YY  LG+      I+  + R+      + IR+N +    L   +   +L+A+ +S  +  
Sbjct: 183 YYYALGLLGALGLIMWRIVRSPFGLHLQAIRENAQKAAYLGVQVTRMRLAAYVISGLYGA 242

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           + GA  A +     P++  ++++  ++ + +LGG  +       +   + + +    +  
Sbjct: 243 IGGAILAITIGLADPEIVYWTQSGNLVFMAVLGGSGAFIGPVVGSLAFVLLQDTVMSITQ 302

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           Y+                 +M   L L+++     L  
Sbjct: 303 YW---------------RFVMGAVLILLVVFFPGGLSG 325


>gi|160941677|ref|ZP_02089004.1| hypothetical protein CLOBOL_06573 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435174|gb|EDP12941.1| hypothetical protein CLOBOL_06573 [Clostridium bolteae ATCC
           BAA-613]
          Length = 327

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 59/324 (18%), Positives = 124/324 (38%), Gaps = 29/324 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +  +  + L   +    S  Y+  +    LI  +    + +++G  G  S      + +G
Sbjct: 13  ILTLMAIGLGCSILPAVSSSYMMRVFNITLITYLCVLSVYVLLGLCGQNSFAQAGLWGVG 72

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY    +  + GL       ++   + A   I+G    + +  Y   A++ +  I   + 
Sbjct: 73  AYITANMVLKLGLGSAAAFIIATTGTAAFAFILGFAFFRLKQYYFTFASVGLMTILNGLF 132

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + W P+T G  GI         G    +  R               ++++L +C L++  
Sbjct: 133 MNWVPVTGGALGISDIPVFSIAGFAANTENRK--------------FFLILIVCMLASLG 178

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           I  L  + +  ++  IRDN+ A   L    +  K  AFA+S A  G AGA +A     +S
Sbjct: 179 IRILFHSPLGRSFMAIRDNEMAANCLGINSLLTKSIAFAISGALCGAAGAMYAFLSGYLS 238

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
              F + ++ + + +++LGG  S       T I+  + E    +  Y             
Sbjct: 239 YQTFTYQQSTMYLIMIMLGGTMSPVGAIIGTLIISLLQEWVRPLQNYM------------ 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                +    + ++++++   ++ 
Sbjct: 287 ---QFIYGTGIMILMIVQPEGIIG 307


>gi|148255667|ref|YP_001240252.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. BTAi1]
 gi|146407840|gb|ABQ36346.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 351

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 75/316 (23%), Positives = 126/316 (39%), Gaps = 16/316 (5%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
            +    S   +D++    L   + A GL+++ G  G +SL      A+GAY+   L  R 
Sbjct: 34  LVPLIGSDYLMDAVLTPFLALALAAVGLNVLTGYAGQVSLGSAAFLAVGAYAAYNLNLRL 93

Query: 89  GLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                L  I ++  I+ A G+I GLPSL+ RG YLA++TL      Q  L K+   +N  
Sbjct: 94  PQLPLLADIVLAGGIAAAVGIIFGLPSLRLRGFYLAVSTLAAQFFVQWALTKFGWFSNDN 153

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
           A   +                  R  S         Y   L +  ++  +   L  +   
Sbjct: 154 ASGVIDAP-------------VIRVGSLTFTSATGRYVFSLTIVAVATVLTARLLSSQTG 200

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSEN 266
             +  +RD++ A   +   ++  KL AF VSS  IG+AG  +A A    + P  F    +
Sbjct: 201 RNFIAVRDHEIAARVIGVPLLRTKLLAFGVSSFLIGVAGVLWAFAYLRTVEPAGFNLDRS 260

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             ++ I+I+GG+ SL       A +I    L   +      S+        M    ++  
Sbjct: 261 FQILFIIIIGGLASLRGAFIGAAFIIVFPLLLSRLGAAVLGSVFDSGV-LEMSQRIVIGA 319

Query: 327 ALFLVILMRSHSLLRL 342
            +   ++     L+ L
Sbjct: 320 LIIAFLIAEPRGLIAL 335


>gi|227499402|ref|ZP_03929513.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Anaerococcus tetradius
           ATCC 35098]
 gi|227218464|gb|EEI83707.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Anaerococcus tetradius
           ATCC 35098]
          Length = 295

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 100/307 (32%), Gaps = 29/307 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS----IWL 94
           I +      IY + A G ++V G   L++        +GAY+  +       +    +WL
Sbjct: 7   IFNGLQLGSIYALVALGYTMVYGIAKLVNFAHGDVIMVGAYTIALAIQTAAFNAGLPLWL 66

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
               + ++    G+ +   + +   +   ++ LI +      L          +   +  
Sbjct: 67  TFIPAVVVCTVLGITVERVAYRPLRNSSPVSLLITTIGVSLFLQNLFVKLFTSSAKPIPA 126

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                               + +   +     ++    L+  + L++ +T    +   + 
Sbjct: 127 IFPQFSIQF-----------AGIHLSLATIVTIVSTIILTYILHLFINKTKNGKSMLAVS 175

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           ++  A   +   +       FA+ SA  G+A   + +S  +I P M      I   +  +
Sbjct: 176 EDYGASELVGINVNQVMTMTFAIGSALAGIASVLYVSSYPQIQPFMGSI-LGIKAFTAAV 234

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           LGG+ S+        IL  +  L        +                ++ + L LV+L+
Sbjct: 235 LGGIGSIPGAVIGGMILGMIEVLTRAYLSSAYADA-------------IVFMVLILVLLV 281

Query: 335 RSHSLLR 341
               L  
Sbjct: 282 HPTGLFG 288


>gi|149913984|ref|ZP_01902516.1| ABC transporter, membrane spanning protein [Roseobacter sp.
           AzwK-3b]
 gi|149812268|gb|EDM72099.1| ABC transporter, membrane spanning protein [Roseobacter sp.
           AzwK-3b]
          Length = 382

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 51/366 (13%), Positives = 108/366 (29%), Gaps = 42/366 (11%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           N+   +         +++ L L       +  +   + L++ M    +++  G  G+L+L
Sbjct: 3   NRIFILGDRAVYAAFIIIVLALPLLVDDVFWLNRIAKYLVFGMLGLAIALSWGYAGILNL 62

Query: 69  NCVIAYAIGAYSYVILG-------------SRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
              + + +GAY   +                     +       A     C        +
Sbjct: 63  GQGLFFGLGAYMIAMSLKLQSYTSLQQGSDKPIPDFMLWNAEPGAPTDLCCITPGSWLWI 122

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG-----------------IYVADRLYF 158
            F+  +  +A  I+  +   ++I         +G                       +  
Sbjct: 123 PFQAQWFGMAMAIVVPVVFALIIGSTIFRLRVSGVYVAIITLALVLLARLLFIDLQPVTN 182

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +  L         F  + +  YY++     +      WL  T      ++ RD+  
Sbjct: 183 GFNGLTDLGWLTIAGIEFDPFMVATYYIIAVSVCVVLLFSRWLISTRAGLILQSTRDDPN 242

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +   ++  F VS+   G AG  F    +  +P  F  + +I ++    +GG 
Sbjct: 243 RSRYLGYDVASYQVFFFTVSAGIAGFAGMLFVIVSEFATPTYFDIAFSISMVVWAAVGGR 302

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +SL   A    ++  +                     F      ++ I   LV+L     
Sbjct: 303 SSLIGAALGAILINTIEASVSE------------SEMFQQAWRLIIGIVFVLVVLFMPRG 350

Query: 339 LLRLRT 344
           L  L  
Sbjct: 351 LAGLAR 356


>gi|254248179|ref|ZP_04941499.1| ABC-type branched-chain amino acid transport system, permease
           component [Burkholderia cenocepacia PC184]
 gi|124874680|gb|EAY64670.1| ABC-type branched-chain amino acid transport system, permease
           component [Burkholderia cenocepacia PC184]
          Length = 404

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 92/334 (27%), Gaps = 36/334 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI------- 83
                  +  ++  + L Y   A GL I  G  G+LSL   + + +G Y+  +       
Sbjct: 65  FPLALDTFRLNLMGKYLTYAFVAIGLVIAWGYGGVLSLGQGVFFGLGGYAMAMFLKLEAS 124

Query: 84  -----LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
                           +                          +    L     +     
Sbjct: 125 DPAATHTQTTPGIPDFMDWNQLTALPTWWKPFHSLPFSILAVLVVPTALAFVIGYAMFKR 184

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLL 188
           +   +        VA  L  L    +                 +       ++ +Y+V  
Sbjct: 185 RVGGVYFAIITQAVALILSVLIIGQQGYTGGVNGITDLRTLLGWDIRTDHAKLVLYFVNA 244

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +   +  +  W++R+ +      +RD +         +   K+ AF +++    + GA 
Sbjct: 245 ALLIGALLVGRWVQRSKLGTLLLAMRDKEDRVRFSGYDVAMFKVFAFCLAAMLAAIGGAM 304

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           F      +SP       +I ++    +GG  SL        ++                 
Sbjct: 305 FTLQVGFMSPSFVGIVPSIEMVIYAAIGGRMSLVGAVYGAILVNLGKSW----------- 353

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              F  SF      LM      V+++  + L  L
Sbjct: 354 ---FSESFPNLWLYLMAAMFIGVVMVFPNGLAGL 384


>gi|34496958|ref|NP_901173.1| leucine/isoleucine/valine transport system permease
           [Chromobacterium violaceum ATCC 12472]
 gi|34102814|gb|AAQ59178.1| leucine/isoleucine/valine transport system permease protein
           [Chromobacterium violaceum ATCC 12472]
          Length = 309

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 95/305 (31%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   IY + A G ++V G +GL++         GA   + + +        L   
Sbjct: 8   ILNGLVLGSIYALIALGYTMVYGIMGLINFAHGEVVMFGAMVTITVITTLMGMGINLPGP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G    I     L F  + +A   L   +    ++                     
Sbjct: 68  ALVLIGLLVAIPACMLLGFTIERVAYRPLRGKQRLAPLITAIGVSI--VLQQVAILIWGR 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  ++                  ++     + A ++L + +T +  A R    N  
Sbjct: 126 NYIPFPQILDHDVVSIFGASITKLQIVIIALCLAIMAGLLLMVEKTKLGRAMRATSQNPA 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +     + F + S    +AG   A + ++    M  F   +   +  +LGG+
Sbjct: 186 VAGLMGVNVNTIISATFVIGSGLGAIAGVMVATNYEQAHYYM-GFMIGLKAFTAAVLGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L  +  L  G         L      +     +  + L LV++ R   
Sbjct: 245 GNLGGAVAGGILLGIIESLGAGYIGSLTGGFLG-----SNYQDIIAFMVLILVLIFRPSG 299

Query: 339 LLRLR 343
           LL  +
Sbjct: 300 LLGEK 304


>gi|254711853|ref|ZP_05173664.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella ceti M644/93/1]
 gi|254714922|ref|ZP_05176733.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella ceti M13/05/1]
 gi|261216613|ref|ZP_05930894.1| predicted protein [Brucella ceti M13/05/1]
 gi|261319482|ref|ZP_05958679.1| predicted protein [Brucella ceti M644/93/1]
 gi|260921702|gb|EEX88270.1| predicted protein [Brucella ceti M13/05/1]
 gi|261292172|gb|EEX95668.1| predicted protein [Brucella ceti M644/93/1]
          Length = 570

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 108/304 (35%), Gaps = 21/304 (6%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
              +         +      KY   +   + I  +    L +V G  G++SL  +    +
Sbjct: 8   AALIALVFAALGAVILLGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGV 67

Query: 77  GAY-SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GA+ +  +        + + + +  + +   G+ +GLP+L+ RG  LAI TL  +  F  
Sbjct: 68  GAWVTGYLNLIEAPGGLAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDT 127

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L                                          +   +  +L    + A
Sbjct: 128 VLATIT--------------------FPGQTSFTQVARPDLFASDRGYFLFVLLAYGIIA 167

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++ ++  + +  +W  +R +++A  +   +I  AKLSAFA+S+   G++G   A     
Sbjct: 168 VVLEFISHSRLGASWLAVRHSKRAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGT 227

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +  + F   +++ + ++  + G            +++   EL   +N       + F   
Sbjct: 228 LVAENFSMMQSLALFAVATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALG 287

Query: 316 FNMR 319
               
Sbjct: 288 AVQA 291


>gi|239905225|ref|YP_002951964.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
 gi|239795089|dbj|BAH74078.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
          Length = 297

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 93/305 (30%), Gaps = 22/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++      + +GAY      +   L   + + +
Sbjct: 10  MLNSLTLGSLYALVAIGYTMVYGILRLINFAHSEMFMLGAYFVFWGITLANLPWPVAMVI 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++   G+++   + +   D   I+ LI S      L     +               
Sbjct: 70  AIVVTATLGIVVDQVAYRPLRDAPRISALISSIGVSFFLQNVAIVFFQA----------I 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                R            V       +V L    L   +I  + RT      R I  + +
Sbjct: 120 PREVYRPQWLENPIIMGGVRVLPLTLFVPLLSLALMLGLIWIVYRTKAGLGMRAISKDIE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
             + +   +       F + SA    +G  +A    ++ P M             + GG+
Sbjct: 180 TSYLMGVPVNRIIALTFGIGSALAAASGIMWALRYPQLQPIMGTI-PGFKAFIAAVFGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L  +  +            + F             + L  V++ +   
Sbjct: 239 GSIQGAVIGGLALGFIEIMT-----------VAFFPDLAGYRDAFAFVLLIAVLMFKPTG 287

Query: 339 LLRLR 343
           LL  R
Sbjct: 288 LLGER 292


>gi|294851029|ref|ZP_06791705.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
 gi|294821672|gb|EFG38668.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
          Length = 160

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 47/146 (32%), Positives = 80/146 (54%), Gaps = 2/146 (1%)

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
             +  AW  +R+++ A  SL       KL+AFA  + F G AG+FFAA +  +SP+ F F
Sbjct: 1   MPVGRAWEALREDEIACRSLGINTTTTKLTAFATGAMFGGFAGSFFAARQGFVSPESFVF 60

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            E+ ++++IV+LGGM SL  IA A  ++IG  E+   M+  +   +   D +  +    +
Sbjct: 61  LESAVILAIVVLGGMGSLVGIAIAAIVMIGGTEILREMS--FLKIIFGPDFTPELYRMLI 118

Query: 324 MVIALFLVILMRSHSLLRLRTPSNFL 349
             +A+ +V++ +    +  R PS FL
Sbjct: 119 FGLAMVVVMVWKPRGFVGSREPSAFL 144


>gi|229823474|ref|ZP_04449543.1| hypothetical protein GCWU000282_00772 [Catonella morbi ATCC 51271]
 gi|229787249|gb|EEP23363.1| hypothetical protein GCWU000282_00772 [Catonella morbi ATCC 51271]
          Length = 296

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 97/288 (33%), Gaps = 12/288 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G++ L++        +GA+    L +  G+  +L + +
Sbjct: 12  LFNGLSTGSIYALIALGYTMVYGTIRLINFAHGDILMMGAFFGFYLVNVQGMDFYLSLAL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+ +   + K       +A LI +     +L        G            
Sbjct: 72  TMVFTSVLGVTIERVAYKPLRKSTRVAALITAIGVSFLLENAMIYFFGPE---------- 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +  +   F     +       + +    L  ++   ++ T +  A R +  +++
Sbjct: 122 -VKAYPTSFKTTTFKIMGAVINSKQVLIFVTTILLMVALQFIVKYTKMGKAMRAVAVDEE 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G+AG  +    ++++  M   +  +      ++GG+
Sbjct: 181 AAQLMGINVDAVISFTFALGSALAGVAGVLYGLYSNQMAATM-GLTPGLKAFVAAVVGGI 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            S+        ++  +           F     +     +       +
Sbjct: 240 GSIPGAMVGGYLIGLLETFVSAFGGSAFKDAAVYALLIVILLVLPAGL 287


>gi|295095869|emb|CBK84959.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           (TC 3.A.1.4.-) [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 357

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 93/324 (28%), Gaps = 27/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
                 ++ ++  +IL Y + A  L +V G  G+LSL   I +A+G Y+  +        
Sbjct: 42  PLAVSTWMLTLIGKILCYAVVAVALDLVWGYAGMLSLGHGIFFALGGYAMGMYLMRQAAG 101

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS---EIFQNILI 138
                      W  +P     +      + L         L           +     ++
Sbjct: 102 DGLPAFMSFLSWSELPWFWWGTQHFAWALVLIVTIPGLLALVFGWFAFRSKIKGVYFSIM 161

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                  G    +  +  +              F  +     I ++   + +  L+    
Sbjct: 162 TQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGFSVTATTTRIALFLATVVLLLLALGTG 221

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 222 YALAKSKFGRILTAVRDAENRLTFCGYDPRGFKLLVWTLSAVLCGLAGALYVPQVGIINP 281

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                + +I     V LGG  +L       A++ G                  F  +   
Sbjct: 282 GEMSPTNSIEAAIWVALGGRGTLVGPVIGAALVNGAKSF--------------FTVAMPE 327

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                + +    V L     +  L
Sbjct: 328 YWQLFLGLIFIAVTLFLPRGVFGL 351


>gi|254427353|ref|ZP_05041060.1| amino acid or sugar ABC transport system, permease protein,
           putative [Alcanivorax sp. DG881]
 gi|196193522|gb|EDX88481.1| amino acid or sugar ABC transport system, permease protein,
           putative [Alcanivorax sp. DG881]
          Length = 380

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 54/347 (15%), Positives = 96/347 (27%), Gaps = 36/347 (10%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V    L + +       +  +M  + L Y   A GL +  G  G+LSL   I + +G Y 
Sbjct: 19  VLLAFLLVVIFPLALDAFRLNMIGKYLTYAFAALGLVLCWGRSGILSLGQGIFFGLGGYC 78

Query: 81  YVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
             +                       +                  S          A L 
Sbjct: 79  MAMFLKLEASSPENTAIQSTPGIPDFMDWNQLTALPWFWEPFHSFSFTLIAVVAVPALLA 138

Query: 129 MSEIFQNILIKWKPITNGKAGIYVA----------DRLYFLGTTVRSLIRFFRFPSSFVI 178
           +         +   +        +A                   +  L     +      
Sbjct: 139 LIIAVAMFKRRVGGVYFAIITQAIAAILTILIIGQQGFTGGVNGITDLRTLMGWDIRTDE 198

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
            +  +Y+V +GM FL   I  W+ R+ +      +RD +         +   K+  F ++
Sbjct: 199 AKTALYFVCVGMLFLCLIIGAWVMRSKLGRILLAMRDQEDRVRFSGYDVASFKIFVFCLA 258

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           + F G+ GA F      +SP       +I ++ +  +GG  SL        I+       
Sbjct: 259 AMFAGIGGAMFTLQVGFMSPSFVGIVPSIEMVILCAVGGRNSLLGAIYGALIVNAAKTF- 317

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                        F  SF       + +    V+L     L  L   
Sbjct: 318 -------------FSESFPELWLYGLGVLFIAVVLAFPDGLAGLYRR 351


>gi|158316261|ref|YP_001508769.1| inner-membrane translocator [Frankia sp. EAN1pec]
 gi|158111666|gb|ABW13863.1| inner-membrane translocator [Frankia sp. EAN1pec]
          Length = 661

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 56/337 (16%), Positives = 120/337 (35%), Gaps = 31/337 (9%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
               +++   L  +AV   ++  L      S        +  LI  +      ++ G  G
Sbjct: 320 PPPRHRWSVGLPAVAVGCAIVYVLSDAYLGSY-------VTSLIAGLVCLSFVVLTGYTG 372

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            +SL  +    + A+         G+   L   ++   +    + +G+P+L+ RG +LA+
Sbjct: 373 QVSLAQMAIAGVSAFGLSKFAHGIGIPFPLAPLLAIGGAVLGALAVGIPALRVRGVHLAV 432

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            T+ ++    + +     +T G +G  V                   F   F   E    
Sbjct: 433 VTIALAVAVASAVFGNPAVTGGTSGSPVP--------------TLSIFGFDFRGGETGFA 478

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            V + +  ++   +  LR + +      +R N++A  S+   +   KL AFA S    G 
Sbjct: 479 VVTVLVLAVAGFAVANLRLSPVGLQMLAVRANERAAASVGINVARMKLLAFAFSGVLSGT 538

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG   A ++  +S   F    ++  +++  LGG+T++S       ++          N  
Sbjct: 539 AGVMLAYNQSNVSFQSFGAIASLSFLAVAYLGGITTISGAVVGGMLV----------NGG 588

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                L+           +  + L +  ++    +  
Sbjct: 589 LMTLALQNWFEIGSYQLLVSGVGLIVTAVLNPQGISG 625



 Score = 41.4 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 72/297 (24%), Gaps = 7/297 (2%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y+        +Y     G+ +   S G ++L    A    AY +  L     L + +   
Sbjct: 7   YVLLGLGPGAVYAALGLGVVLTYRSSGTINLAYGAAALYPAYVFAQLNKTGELILPIPGV 66

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG-----KAGIYV 152
                 G     + L         L +   ++             +             V
Sbjct: 67  PPIYFGGVPSKAVALVVALLVAALLGVLIHLLVFRPLATEPALARVVASIGVLITIQAIV 126

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
             R          L+         +        + L +  + A +    R T+   A R 
Sbjct: 127 IIRFDEQALQPVGLLPDDAVNLGDITVPADRLLLGLLVVLVCAVLAAVYRFTSFGLASRA 186

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
              N K    L  +     L    +++   G+ G   A                +  ++ 
Sbjct: 187 AATNPKGATLLGYSTDSLALVNSTIAAVLAGLFGILVAPITSL--QPTTLTLLIVPALAA 244

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            ++G  TS      A  ++  +      +                     ++ +   
Sbjct: 245 ALIGRFTSFGVTVAAALVVGILQSQIVLLQGKLEWLPRAGLGDALPFAVIVIAMFAV 301


>gi|239813383|ref|YP_002942293.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239799960|gb|ACS17027.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 327

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 61/325 (18%), Positives = 132/325 (40%), Gaps = 29/325 (8%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
             F  +      ++      ++L+  + A  L+ ++G  G+++L       +GAY+ V L
Sbjct: 19  AAFPLVAPLFGLEFYIGFVRRVLVVALAAASLNFILGFGGMVALGHAGFIGMGAYTVVAL 78

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                +S W++ P++A+++G    ++G  +L+ RG Y  + TL ++++   +++  +   
Sbjct: 79  SDAGVVSAWVMWPLAALVAGLVAALIGTVALRTRGVYFIMTTLAVAQMLYFVVVSLRR-Y 137

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G  G  +  R                 P   +  E   Y+V+L +  L+   +    ++
Sbjct: 138 GGDDGYTLMSRPT-------------LLPGLDLGNESNFYWVVLAIVALALWWLHRATQS 184

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
              +A   IRDN+    +L   +   +L AFA++ A  G+AGA  A     +SP    ++
Sbjct: 185 RFGHALMGIRDNETRMRALGYPVFKLQLVAFAIAGAIAGLAGALLAGGNGFVSPATMHWT 244

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
           ++  ++ +V++GG+           + + + E       ++                  +
Sbjct: 245 QSATLLVMVVIGGLGRSWGGPVGAVVWLVLEEALKQHTEHWH---------------MPL 289

Query: 325 VIALFLVILMRSHSLLRLRTPSNFL 349
            + L  V L     L  L      L
Sbjct: 290 GLLLIAVALWAPKGLAALYKRRLPL 314


>gi|221213700|ref|ZP_03586674.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia multivorans CGD1]
 gi|221166489|gb|EED98961.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia multivorans CGD1]
          Length = 325

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 19/314 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +  +   +Y + A G ++V G + +++        +GA   +   S            
Sbjct: 17  LINGLVLGSVYAIIALGYTMVYGIIAIINFAHADVLMVGAMVSLSAISVLQRHFPNLGNV 76

Query: 94  ----LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
               + + +++    A G  +   + +       +A LI +     +L     I  G   
Sbjct: 77  PTLLVALAMASAACAAVGYTIERVAYRPLRRAPRLAPLITAIGVSILLQTLAMIIWG--- 133

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                    L  T    +         V+  +    +++    + A ++L + +T +  +
Sbjct: 134 -RNPLPFPQLLPTDPIALVHAGANGPGVVISMTEIVIIVVAFIMMAGLLLLVHKTKLGRS 192

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R I ++      +     F     F + SA   + G   A+    I   M  F   I  
Sbjct: 193 MRAIAESHLVASLMGVNPNFVISVTFMLGSALAALGGLMIASEYGNIHFYM-GFIPGIKA 251

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ +L        +L  + +L  G        +       +        I L 
Sbjct: 252 FTAAVLGGIGNLGGAMVGGIVLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFIVLI 306

Query: 330 LVILMRSHSLLRLR 343
           +V++ R   LL  R
Sbjct: 307 VVLVFRPSGLLGER 320


>gi|163868304|ref|YP_001609513.1| permease protein of ABC transporter [Bartonella tribocorum CIP
           105476]
 gi|161017960|emb|CAK01518.1| permease protein of ABC transporter [Bartonella tribocorum CIP
           105476]
          Length = 352

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 63/339 (18%), Positives = 117/339 (34%), Gaps = 7/339 (2%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K          ++ L++FLF        Y   +   I I  + A  L+++ G  G+ S
Sbjct: 1   MAKSTTTFLSCISIFVLIVFLFYADNHFNDYTLRIINLIAINAILAISLNLIYGFTGMFS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      AIGAY   IL          ++ +   I+     +     +      L  A +
Sbjct: 61  LGHAGFMAIGAYICAILLLSPEQK--EMMWILEPIAEPLSHLQLPFFIAVVVSGLCAAII 118

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +      + +    +     G     R+     T  +                + Y  L
Sbjct: 119 GLLIALPILRLGGDYLGIATLGFAEIIRIVITNATSFTNGSLGIKGIPQEATLWWNYGWL 178

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                    ++    R+   N  R IRD++ A  ++     F +  +F V + F G+ GA
Sbjct: 179 AFTVLFIVLLL----RSNTGNVLRAIRDDEIAAKTMGINAFFYRSFSFTVGAFFAGIGGA 234

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             AA    I P MF F     ++ IV+ GG+ S++     + I+  ++E    +   +  
Sbjct: 235 LMAALISTIDPKMFNFLLTFNILMIVVAGGLGSITGSIIGSIIITVMLEWLRIIESPFDL 294

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
             +            +  + L ++IL     L+  R  S
Sbjct: 295 GFIHIP-ETPGLRMVVFSLLLLVIILFWRKGLMGQREFS 332


>gi|54020364|ref|YP_115660.1| putative ribose ABC transporter [Mycoplasma hyopneumoniae 232]
 gi|53987537|gb|AAV27738.1| ribose ABC transporter [Mycoplasma hyopneumoniae 232]
          Length = 604

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 99/323 (30%), Gaps = 27/323 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            K+L L  ++  +   L +    S  +  ++    +     A G ++V+   G + L+  
Sbjct: 288 TKLLILFLIIAFITGALNVNFFSSYNWFVAILKNNIFIGFIALGQTLVI-LTGGIDLSVG 346

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                GA  Y++L  + GL    ++ +  +I  A G++ G+   KF+     +    +  
Sbjct: 347 SLIGFGATIYLLLTVKLGLHFVAVLFILIIILAAIGILNGILISKFKIPPFIVTLAGLLS 406

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +   I I  K                    T  +  +   F             ++L   
Sbjct: 407 LRGAIAILLKG-------------------TPITNAQDPIFNFFNYNLGSNFSVLVLVFI 447

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
              A +I +++ +        + DN  A            +  +  S  F  + GA   +
Sbjct: 448 ITVAVLIFFIKFSKFGRYVYAVGDNPVAATFSGIKNNKILILVYMFSGIFA-ILGALSIS 506

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           S          +   +  ++ V+LGG       A           +          +   
Sbjct: 507 SGTTSVSPNTGYGFELDTVTAVVLGG------TALTGGKGGVGKTIIGWFAMALLLNTFS 560

Query: 312 FDCSFNMRHTTLMVIALFLVILM 334
           F    +        I + L IL 
Sbjct: 561 FFQLDSNFQLVAKGIIIVLAILF 583


>gi|329906614|ref|ZP_08274461.1| ABC transporter permease protein [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327547212|gb|EGF32069.1| ABC transporter permease protein [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 359

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 55/336 (16%), Positives = 120/336 (35%), Gaps = 11/336 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                ++  +L   F           ++  +ILI+++      +++G  G++S    + +
Sbjct: 15  WLTALLLLIVLGLAFAPFIFPGAKALNVAAKILIFIVLVASYDLLLGYTGIVSFAHTMFF 74

Query: 75  AIGAYSYVILGSRYGLSIW---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
            IGAY   I  +R G       + I  + ++S    +++GL SL+ R  + A+ TL ++ 
Sbjct: 75  GIGAYGVAIASTRMGPGWLALGVGIVAALLLSLVLSLLIGLFSLRVRAIFYAMITLAVAA 134

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            FQ +  +   +T G+ G+              S    F          +  YY+L    
Sbjct: 135 AFQTLASQLSELTGGEDGLSFKLPEMLTPAFRFSESTLFGVTPDG---RLLTYYLLFAST 191

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +   ++L +  +      + IR+N     ++    +  +  +  +++ F  +AGA  A 
Sbjct: 192 VVLFLMLLRIVNSPFGRVLQAIRENDFRAEAIGYRTVVFRTLSNVLAALFATLAGALLAI 251

Query: 252 SRDRIS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                       F   I ++ IV++GGM +L        + I        +      +  
Sbjct: 252 WLRYNGADTSLSFEIMIDILLIVVIGGMGTLYGAVCGATLFILAQSYLQDLMGMAARATE 311

Query: 311 KFDCSFNMR----HTTLMVIALFLVILMRSHSLLRL 342
                  +         + I   L +      ++  
Sbjct: 312 SVPLLSALLSPDRWLLWLGILFILSVYFFPSGIVGR 347


>gi|227819873|ref|YP_002823844.1| branched-chain amino acid ABC transporter permease [Sinorhizobium
           fredii NGR234]
 gi|36958762|gb|AAQ87230.1| Branched-chain amino acid transport system permease protein LivM
           [Sinorhizobium fredii NGR234]
 gi|227338872|gb|ACP23091.1| branched-chain amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 335

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 72/327 (22%), Positives = 132/327 (40%), Gaps = 28/327 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L+            ++       + Y +   GL++++G  G + L     + +GAY+ 
Sbjct: 11  LVLVAAALGSPLVVPDFLLFEISIAVSYGIAILGLNLLLGFTGQICLAQGALFGVGAYTT 70

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            IL   +GL     +P++A+ +G  G+I+GLP+L+ +G  LAI T  ++  F  +L+K  
Sbjct: 71  AILNVSFGLDPLATLPLAAVSAGLIGVIIGLPALRLQGLQLAIITFGVASAFPQLLLKMD 130

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +T G  G+                             E ++Y V L    +S  ++  L
Sbjct: 131 TLTGGVTGLATDQPFAPKWF--------------PGSQEAWLYGVSLICAAISIMVVTRL 176

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R       R +RDN     +L   +   +L+AFAVSSA  G+ G  F      ISP  F
Sbjct: 177 LRGDTGRLMRALRDNPVIAEALGVNLTKGRLAAFAVSSALAGLGGGLFCILNGFISPQSF 236

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
              ++I ++   I+GG+TS++        ++ V      +N                   
Sbjct: 237 LPMKSIDILIGGIVGGITSIAGAFIGAGFVVFVPGFTTDINPALGG-------------- 282

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNF 348
            +  + L  ++++    +  LR  +  
Sbjct: 283 LIYGLCLIAMMMVARQGIAGLRIETFL 309


>gi|323701777|ref|ZP_08113448.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574]
 gi|323533313|gb|EGB23181.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574]
          Length = 290

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 91/304 (29%), Gaps = 25/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G + L++      Y +GA+  V++ S +   + + +  
Sbjct: 6   LLNGITLGATYALIALGYTMVYGIIQLINFAHGEIYMVGAFIGVLMVSVFHQGLLISLCA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G+ +   + +       +A LI +      L        G            
Sbjct: 66  AMAFCMIMGVAIERVAYRPLRRSTRLAPLISAIGVSIFLQTLMTKIEGPQ---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I    +    +        +L+    L   +   ++   I  A R   ++  
Sbjct: 116 -AVAFPHVINDSLYHMGAIEISKIQLIILVVSSLLMLGLHFIVKYVKIGKAMRAASEDYD 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       FA+ SA     G       + ++P M      +      +LGG+
Sbjct: 175 TAALMGINVNRVISFTFAIGSALAAAGGVLVGMYFNSVAPLM-GVLAGLKAFCAAVLGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L     L                  F++    +    L +V+L R   
Sbjct: 234 GSIPGAMLGGLFLGVAETL-------------GVAGGFDLYKDAIAFTMLIVVLLFRPTG 280

Query: 339 LLRL 342
           LL  
Sbjct: 281 LLGR 284


>gi|89092362|ref|ZP_01165316.1| possible ABC transporter, permease protein precursor
           [Oceanospirillum sp. MED92]
 gi|89083450|gb|EAR62668.1| possible ABC transporter, permease protein precursor
           [Oceanospirillum sp. MED92]
          Length = 308

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 56/318 (17%), Positives = 114/318 (35%), Gaps = 27/318 (8%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           +  + LG            +++L + +FA   ++++G +GLLS         G Y    +
Sbjct: 8   VALVALGLVAPFILYPVFVMKVLCFALFACAFNLLLGYVGLLSFGHAAFLGTGGYITGYM 67

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
               GL+  L I      +   G + G  ++K  G Y A+ TL +S++   + ++    T
Sbjct: 68  MMEAGLTPELGILCGTAAAATLGAVYGKLAVKREGIYFAMVTLALSQLAFFVYLQAP-FT 126

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G+ G+    R                F    +   + MYY +  +      ++     +
Sbjct: 127 GGEDGMQGVPR-------------GHLFGLIDLSDNMNMYYFVFAIFLFGFWVVNRTIHS 173

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                 + IR+N+    SL   +   K +AF +SSA  G+AG+         S     + 
Sbjct: 174 PFGQILKAIRENEPRAISLGYNVNDYKWAAFVISSALAGLAGSTKTLVFQLASLTDAHWH 233

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
            +  V+ + +LGGM ++         ++ +     G                      +M
Sbjct: 234 MSGEVVLMTLLGGMGTIFGPIVGAGAVVTIQNYLSG-------------GELGNYIHIIM 280

Query: 325 VIALFLVILMRSHSLLRL 342
            +   + +L     ++  
Sbjct: 281 GLIFVVCVLAFRSGIVGE 298


>gi|317404908|gb|EFV85276.1| high-affinity branched-chain amino acid transport system
           [Achromobacter xylosoxidans C54]
          Length = 308

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 48/311 (15%), Positives = 101/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
             +      IY + A G ++V G +G+++      Y IGAY  ++  +            
Sbjct: 12  FFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGTNSGLPVPF 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            I  ++ V+ +++G  G  +   + +       +  LI +      L  W  +  G    
Sbjct: 72  IIAAMLLVAIVVTGIYGFSVERVAYRPVRGSPRLVALISAIGMSIFLQNWVALGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   + + V   ++F       V        ++L    L   + L+++ + +  A 
Sbjct: 129 ----RDMAVPSLVSGAVQFHMGSDFDVTVPYSRIMIILVTVVLMIGLTLFIKYSRMGRAS 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    +      L           F + +    + G   A +  +++     F   I   
Sbjct: 185 RACSQDMHMANLLGIDTNRVISFTFVMGAILAAVGGVLIAITIGKLN-PFIGFLAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L              +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAAYISSQYKDIVAFS-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|229017275|ref|ZP_04174180.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus AH1273]
 gi|228744028|gb|EEL94125.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus AH1273]
          Length = 333

 Score = 83.0 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 59/334 (17%), Positives = 130/334 (38%), Gaps = 31/334 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V+ L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 15  VFMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  R      + ++ I  + +IS     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 75  VALLFDRQGVSITNFFIGIAAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YY+          +
Sbjct: 135 EKWRSLTHGGDGFTFGVPDIFRDRF-------------------TFYYITFICLISIFIL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L  +    
Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            R T ++ +   +V+L+    L+         +R
Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGTVKKLKNFKR 320


>gi|330899633|gb|EGH31052.1| inner-membrane translocator [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 529

 Score = 82.6 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 315

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 491

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526


>gi|238798911|ref|ZP_04642376.1| Branched-chain amino acid transport system, permease component
           [Yersinia mollaretii ATCC 43969]
 gi|238717221|gb|EEQ09072.1| Branched-chain amino acid transport system, permease component
           [Yersinia mollaretii ATCC 43969]
          Length = 533

 Score = 82.6 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS   + S +       + +  +++      +       
Sbjct: 260 ITYGLLGVINMAHGEMLMLGAYSAYWVQSLFQQFAPHWLALYPLVALPVAFFITAGIGMA 319

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      L       +         +
Sbjct: 320 LER--TVIRHLYGRPLETLLATWGISLMLIQSVRMIFGAQNLEVANPGWLSGGLQILPNL 377

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       V+  +  +     L L +T +    R +  N+              + AF +
Sbjct: 378 ILPWNRIAVIAFVVIVLLFTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGRVDMLAFGL 437

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+             I    +V+LGG+  L+    A   L  + ++
Sbjct: 438 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 495

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 496 LEPQMGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 530


>gi|254446303|ref|ZP_05059779.1| amino acid or sugar ABC transport system, permease protein,
           putative [Verrucomicrobiae bacterium DG1235]
 gi|198260611|gb|EDY84919.1| amino acid or sugar ABC transport system, permease protein,
           putative [Verrucomicrobiae bacterium DG1235]
          Length = 381

 Score = 82.6 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 53/372 (14%), Positives = 118/372 (31%), Gaps = 44/372 (11%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQ----KYIDSMGIQILIYVMFAWGL 56
           M +F  ++     +   + ++  L          S      +  S+  + + Y + A  L
Sbjct: 1   MKLFDNKIEFGGYLSACVVLLLILPAMNAFFPEGSSMHFSSFQLSLWGKYITYAVMAMSL 60

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG----------------------LSIWL 94
           +++ G  GLL L   + +A+GAY++ +    +                          W 
Sbjct: 61  NLLWGYTGLLCLCQSLFFALGAYAFGMYLMLHVGVDSVYNTALPDFMDFQGYTALPWYWA 120

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI----KWKPITNGKAGI 150
                A    A  ++ G+ +  F           +        +          N     
Sbjct: 121 PFENGAFAIAATLLVPGVLAFVFGFLAFRSRIKGVYFSILTQALTYAASLFFFKNNLDLF 180

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                L+     +      F +  +    + +++ +   +  +   +I WL RT      
Sbjct: 181 GNNFILFGGNNGLTDFKEIFGYDVNAASTQRWIFVMSAILMLVVYLVISWLLRTKFGKVQ 240

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           + IRD++        +    K+  F  +S   G+AGAF+      I+ +    ++++ V+
Sbjct: 241 QAIRDSENRVRFSGYSTTTYKMLIFVGTSMVAGIAGAFYVPQVGGINANEMSPAKSLDVV 300

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
             V LGG  +         ++  +      M              +      ++     L
Sbjct: 301 VWVALGGRGTKFGPIIGAIVVNIIKSFTTRM--------------YPDYWLIILGAIFML 346

Query: 331 VILMRSHSLLRL 342
           V+L   + L+ L
Sbjct: 347 VVLFMPNGLVGL 358


>gi|134095639|ref|YP_001100714.1| high-affinity branched-chain amino acid ABC transporter membrane
           protein [Herminiimonas arsenicoxydans]
 gi|133739542|emb|CAL62593.1| Putative high-affinity branched-chain amino acid transport system
           permease protein BraD/LivH-like [Herminiimonas
           arsenicoxydans]
          Length = 309

 Score = 82.6 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 96/305 (31%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G L L++        IGA + + +          L  +
Sbjct: 8   IINGLVLGSMYALVALGYTMVYGVLNLINFAHGDVLMIGAMAGLTILKMLNTVAPDLPGI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +I    G I    ++    + +A   L  +     ++         +    +      
Sbjct: 68  VKLIIAILGAIPVCVAVNVLIERVAYRRLRNAPRLAPLITAIGVSILLQTFAMMIWGRS- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  ++          +       +L+        + L + +T +  A R   +N +
Sbjct: 127 -PLPFPQVMPGEPLHILGALISPTQVMLLILAAASMLLLALLIEKTKLGRAMRATAENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        +  F + +    +AG  +AA+       M  F   +   S  +LGG+
Sbjct: 186 VAGLMGVDSNRVIVMTFVIGATLAAIAGVMWAANYSSAQFAM-GFVPGLKAFSAAVLGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L  +  L  G         L      +        + L +V+ +R   
Sbjct: 245 GNIYGAMLGGILLGLIESLGAGYIGDLTGGFLG-----SHYQDIFAFVVLIIVLTLRPSG 299

Query: 339 LLRLR 343
           ++  R
Sbjct: 300 IMGER 304


>gi|313885609|ref|ZP_07819359.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619339|gb|EFR30778.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Eremococcus coleocola ACS-139-V-Col8]
          Length = 292

 Score = 82.6 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 104/288 (36%), Gaps = 12/288 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G++ L++      Y +GA++   L +   ++I+L + V
Sbjct: 8   MVNGIALGSIYALIALGYTMVYGTIKLINFAHGEVYMLGAFTGFYLVTVLQVNIFLAMVV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+I+   + K   +   +A LI +      L        G            
Sbjct: 68  AMLATSLLGVIIERVAYKPLRNSTRVAALITAIGVSFFLQNIMIYFVGPE---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S I+        ++       V++    L  ++ L +++T +  A R +  + +
Sbjct: 118 -VKAFPSPIKVTILKVFGLVITSKQILVVVMTVILMVALQLIVQKTKMGKAMRAVAVDPE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S   G+AG       + I   M   +  +      ++GG+
Sbjct: 177 AAQLMGINVDRVISFTFALGSGLAGIAGILVGIYYNSIQATM-GTAPGLKAFIAAVIGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            S+        ++  +  L   + F  +   + +     +       +
Sbjct: 236 GSIPGAMVGGYLIGILETLVTVLGFSNYKDAVVYPLLIIILLVLPSGL 283


>gi|293606879|ref|ZP_06689227.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292814731|gb|EFF73864.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 625

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 62/309 (20%), Positives = 129/309 (41%), Gaps = 33/309 (10%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
           T    Y+  +  +ILI  +FA  L  + G  G+ S      + +GAY   +L     L +
Sbjct: 340 TLQWPYLGILMTEILIAALFAASLHFLTGLAGMTSFGHAAWFGLGAYGAALLLKLAALPM 399

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
              + +    +    ++ G   ++  G YLA+ TL +++I   +  +W  +T G  G+  
Sbjct: 400 EAALLLGPFAAAFGALLFGWFCVRLSGVYLAMLTLAVAQILWAMAYQWDDVTGGSNGL-- 457

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                              +PS+++    + YYV LG+C    + +  L  + +  A R 
Sbjct: 458 ----------------IGLWPSAWLAQGPWFYYVTLGLCAAGIAWLRRLAFSPLGYALRG 501

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +RD+     +L       + + F  +S   G+AG+ +A S+  I+PD+   S ++  + +
Sbjct: 502 VRDSPLRAEALGIETRRVQWAGFVAASFAAGIAGSLYAFSKGSIAPDVLAVSRSVDGLVM 561

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           V+LGG+ +L+      A    + ++      Y+                 ++ +A+  ++
Sbjct: 562 VLLGGLQTLAGPLVGAAAYTWLQDVAARSTEYWHA---------------VLGLAILALV 606

Query: 333 LMRSHSLLR 341
           ++    L  
Sbjct: 607 MVFPDGLAG 615



 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 97/303 (32%), Gaps = 17/303 (5%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL--SIWLLIPV 98
           +         + A GLS++ G   +++      Y +G Y        +G   + WL + +
Sbjct: 12  NGLADASALFLVAAGLSLIFGVTRVVNFAHGSFYMLGIYLAWTFTQWFGTGAAYWLGLLL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+++G  G       LK       +  L+ +     I+        G   ++ A     
Sbjct: 72  AALVTGLIGAAAEWLVLKRLYRAPELFQLLATFALVLIIGDAALAIWGPEDLFAACAPGL 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                  Y  +   ++     +   + L L RT      R   +N+ 
Sbjct: 132 SGA----------VQILGRRYPEYDLLLIAAGPVVLGLLWLLLMRTRWGRLLRAASENRS 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L     +   SAF + +   G+ GA  A                     +V++GG+
Sbjct: 182 MLAALGVNQAWLFTSAFTLGAFLAGLGGALAAPRVPA--TLGLDLEIIASAFVVVVVGGL 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++  V  +   +          +  + +          + +V+++R   
Sbjct: 240 GSIPGAFLAALLICCVKAVFVFLGQVAIG---PWVFNLSKLTLLAEFAVMAVVLVVRPWG 296

Query: 339 LLR 341
           LL 
Sbjct: 297 LLG 299


>gi|94311798|ref|YP_585008.1| inner-membrane translocator [Cupriavidus metallidurans CH34]
 gi|93355650|gb|ABF09739.1| leucine/isoleucine/valine transporter subunit, membrane component
           of ABC superfamily [Cupriavidus metallidurans CH34]
          Length = 311

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 98/305 (32%), Gaps = 6/305 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   IY + A G ++V G LG+++        IGA + +            L   
Sbjct: 8   IVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMIGALTALSAIMGLQKFAPGLPEW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      +     L +  + +A   L  +     ++         +    +      
Sbjct: 68  LTLVIATLIAMPVCAVLAYTIERVAYRPLRNAPRLAPLITAIGVSIILQTMGMLIWSRNP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L              S+          ++     + A ++  + RT +  A R   +NQK
Sbjct: 128 LTFPQLLPSSPIDIGSTGATITGKEIVIIGLAVMVMAGLLALVNRTKLGRAMRATAENQK 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +     F   + F + +A   +AG   A +       M  F   +   +  +LGG+
Sbjct: 188 VAGLMGVNPNFVISATFMIGAALAALAGVMMATNYGNAHFYM-GFIPGLKAFTAAVLGGI 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  +  L  G      N +       +        I L +V++ R   
Sbjct: 247 GNLAGAMVGGMLLGLIEALGAGYIGDLTNGVFG-----SNYQDVFAFIVLIIVLVFRPSG 301

Query: 339 LLRLR 343
           ++  R
Sbjct: 302 IMGER 306


>gi|296158151|ref|ZP_06840983.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295891487|gb|EFG71273.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 430

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 51/326 (15%), Positives = 111/326 (34%), Gaps = 27/326 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L   +  +L          Q ++ +   Q    ++FA   ++++G  GLLS        
Sbjct: 21  ALAPWLALILFLGVPPFIWPQSWLLAYLAQTATMIVFALSYNLLLGETGLLSFGHAAYSG 80

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GA     L +R G+ + LL  V  +    CG+++G  S +  G   A+ TL + E+   
Sbjct: 81  LGALVAAQLFNRVGVPLVLLPLVGGIGGALCGLLLGFISTRRAGTAFAMITLGLGELVAA 140

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                     G+AG+ +                  ++           Y ++   C L+ 
Sbjct: 141 AAWTLPDWFGGEAGVAI------------DRASGAQWAGWSFGPAREAYALIAVWCLLAC 188

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           + +  L RT        +RDN     ++       +     +S+ F G++G     + + 
Sbjct: 189 AALFALSRTPFMRLANAVRDNPVRAAAIGCYPRRIRYGVVVLSAFFAGISGTLALINVEL 248

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +S +      +  V+   ++GG  +         +L     +   +   +          
Sbjct: 249 VSTESVGMMRSGAVLIATVIGGTAAFFGPVAGAVVLTFFSVVVASVTRAW---------- 298

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                   + +   +V+++    L  
Sbjct: 299 -----LFYLGLFFIVVVVISPDGLAG 319


>gi|238028400|ref|YP_002912631.1| ABC branched-chain amino acid family transporter, inner membrane
           subunit [Burkholderia glumae BGR1]
 gi|237877594|gb|ACR29927.1| ABC branched-chain amino acid family transporter, inner membrane
           subunit [Burkholderia glumae BGR1]
          Length = 316

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 101/310 (32%), Gaps = 11/310 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +  +   +Y + A G ++V G LG+++        IGA   +   +            
Sbjct: 8   VLNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMIGAMVALSAITVLQNHFPGLGNV 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +  +I+ A   ++G    +     L  A  +   I    +                
Sbjct: 68  ATLTIGLVIAAAVCAVVGFAIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMMIWSRNP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                L +T    +      +   +       ++     + A ++L + +T +  A R I
Sbjct: 128 LPFPQLLSTNPLNVIAATDTTPGAVISATEIVIIAVAFIVMAGLLLLVHKTKLGRAMRAI 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      +     F   + F + SA   +AG   A+    +   M  F   +   +  
Sbjct: 188 SENPNNASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYM-GFIPGMKAFTAA 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L        +L  + +L  G        +       +        + L +V++
Sbjct: 247 VLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFG-----SNYQDVFAFVVLIVVLV 301

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 302 FRPSGLLGER 311


>gi|90420046|ref|ZP_01227954.1| putative permease protein, ABC-type branched-chain amino acid
           transporter [Aurantimonas manganoxydans SI85-9A1]
 gi|90335380|gb|EAS49130.1| putative permease protein, ABC-type branched-chain amino acid
           transporter [Aurantimonas manganoxydans SI85-9A1]
          Length = 428

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 60/326 (18%), Positives = 119/326 (36%), Gaps = 34/326 (10%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  +L  L +          +  + +LI  +FA   ++++G  GLLS      + +GA+
Sbjct: 9   ILAGILALLIVVPPFLDISWQNALVNVLIASLFALAFNLLIGQAGLLSFGHAAYFGVGAF 68

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD----YLAIATLIMSEIFQN 135
           + + L       + L  P+      A G+++GL +  F       Y A+ TL ++E+F +
Sbjct: 69  AALHLMIAVEDGLPLPTPLLPFAGAAAGLLVGLIAGYFSTMRSGVYFALVTLAIAELFHS 128

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +  + + +  G++GI      +   T                   + +YY+ LG   +  
Sbjct: 129 LAPRLQDLFGGESGISSMRMPWQGLTF---------------GSLLEVYYLTLGWVVICG 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +    RT        +RDN++    L      +K+  FAVS+   G+AG+  A S + 
Sbjct: 174 LGLWAFTRTPFGRLTLALRDNEQRVRFLGYNAHASKVVIFAVSAMVAGVAGSLQAISNET 233

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            +  +F    +  V+    +GG T                 L   +   +          
Sbjct: 234 ANYSLFATDVSAQVVLQTFVGGSTVFFGPVIGATAFTLFSFLVSDLTRSWV--------- 284

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                     +   LV+L     +  
Sbjct: 285 ------FYQGLIFVLVMLYMPTGIGG 304


>gi|271963515|ref|YP_003337711.1| branched-chain amino acid ABC transporter ATPase-like protein
           [Streptosporangium roseum DSM 43021]
 gi|270506690|gb|ACZ84968.1| ABC-type branched-chain amino acid transport systems ATPase
           component-like protein [Streptosporangium roseum DSM
           43021]
          Length = 898

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 49/293 (16%), Positives = 106/293 (36%), Gaps = 16/293 (5%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
           +  +  S+  Q L+  +      +V G  G+++L      ++ A +     S     + +
Sbjct: 346 ADDFYVSVVAQGLVLGLIFCSFVVVTGIGGMVNLAQASFASMAALTCGWAFSSGLP-LPV 404

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
            I +  + + A G+++ LP+L+  G  L +ATL ++ +   +L +    +NG  G  +  
Sbjct: 405 AILLGVLGATAVGVLVALPALRLGGRILTLATLALALLADQVLFQIDAFSNGTIGWPLPA 464

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                               +          +LL +  L   ++  L R+A   A   +R
Sbjct: 465 ---------------IGLGFTDTTDPRVRVVLLLALIGLVGLLVRNLERSASGRAVLAVR 509

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
               A  +   +    K+  FA++S   G+ G  FA  +  ++          + +++V+
Sbjct: 510 SAPAAATTSGISAPRTKIMLFALASGIAGLGGVLFATFKGSVTATDLPAFAGFVWLAVVV 569

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           L G+  +        I     EL  G +       + F     +       + 
Sbjct: 570 LQGVRRIGGAVLGGLIAAVFPELLSGWHISAHVGAILFGLGGMILARHPDGVL 622



 Score = 63.0 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 83/297 (27%), Gaps = 9/297 (3%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           YI S  +   ++ + A GL++   + G+ +        + A  +  L +  GL  W    
Sbjct: 7   YIVSGLVTGAVFAVMASGLTLSYSATGVFNFAHGAVGFLAALLFFELNAGLGLPAWAAGL 66

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN---GKAGIYVAD 154
           V+  +       +   ++            I+  I   I +    +           +  
Sbjct: 67  VAVGLFSPLLGYVLHRAMFRGLAQAGETAQIVGTIGLTIALPALGLWIVDLTAEPFGLPR 126

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                            F    V  +             +A +  ++R T      R   
Sbjct: 127 ADATSLPHGLGPYPAVTFTFGGVHLDSDQLITFAFAVLAAAGLWAFMRHTPYGLRMRASV 186

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           D ++           +   A+ + SA  G+AG    ++    S          +  +  +
Sbjct: 187 DRRRLATLRGIDADASSAMAWTLGSALAGLAGVLAVSTLGLDSTAFTVML--FVSATAAV 244

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
            G + S+     A   L  V  L  G   +                  L+ + L L+
Sbjct: 245 FGRLRSIPWTFAAGLGLGVVQNLVAGYADF----AEDVTGLRTAVPVILLFVGLILL 297


>gi|167564636|ref|ZP_02357552.1| putative branched-chain amino acid ABC transporter integral
           membrane subunit [Burkholderia oklahomensis EO147]
          Length = 324

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 50/302 (16%), Positives = 119/302 (39%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS    +  A   Y         G +  L +     
Sbjct: 26  FVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGTTPELGVLAGTA 85

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+ +GL +++ +G Y A+ TL  +++   I ++                      
Sbjct: 86  AATLLGLAVGLFAIRRQGIYFAMITLAFAQMVYFIYLQ--------------APFTHGED 131

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  ++ +YYV+L +   +   I+ +  +        I++N+    
Sbjct: 132 GLQGVPRGRLFGLVDLSSDLALYYVVLVVIACACFFIVRIVHSPFGQVLVAIKENEPRAT 191

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+   G+AGA         +     ++ + +V+ + ++GGM +L
Sbjct: 192 SLGYDTDRFKLLAFILSAGLAGLAGALKVVVLGFETLSDAYWTMSGLVVLMTLVGGMGTL 251

Query: 282 SKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +    +  +    + + +  S     T +  +     +L     ++
Sbjct: 252 FGPLVGAALIVALEDRLGDIGGWLASATGIDWFRSLGESATIVTGLIFIACVLAFRRGIV 311

Query: 341 RL 342
             
Sbjct: 312 GE 313


>gi|53726288|ref|YP_103744.1| branched-chain ABC transporter permease [Burkholderia mallei ATCC
           23344]
 gi|67644005|ref|ZP_00442748.1| urea ABC transporter, permease protein UrtC [Burkholderia mallei
           GB8 horse 4]
 gi|121598470|ref|YP_992076.1| putative amino acid ABC transporter, permease protein [Burkholderia
           mallei SAVP1]
 gi|124383409|ref|YP_001028521.1| putative amino acid ABC transporter, permease protein [Burkholderia
           mallei NCTC 10229]
 gi|126451332|ref|YP_001081581.1| putative amino acid ABC transporter, permease protein [Burkholderia
           mallei NCTC 10247]
 gi|251766564|ref|ZP_04819708.1| urea ABC transporter, permease protein UrtC [Burkholderia mallei
           PRL-20]
 gi|254202447|ref|ZP_04908810.1| putative amino acid ABC transporter, permease protein [Burkholderia
           mallei FMH]
 gi|254207779|ref|ZP_04914129.1| putative amino acid ABC transporter, permease protein [Burkholderia
           mallei JHU]
 gi|52429711|gb|AAU50304.1| branched-chain ABC transporter, permease protein, putative
           [Burkholderia mallei ATCC 23344]
 gi|121227280|gb|ABM49798.1| putative amino acid ABC transporter, permease protein [Burkholderia
           mallei SAVP1]
 gi|124291429|gb|ABN00698.1| urea ABC transporter, permease protein UrtC [Burkholderia mallei
           NCTC 10229]
 gi|126244202|gb|ABO07295.1| urea ABC transporter, permease protein UrtC [Burkholderia mallei
           NCTC 10247]
 gi|147746694|gb|EDK53771.1| putative amino acid ABC transporter, permease protein [Burkholderia
           mallei FMH]
 gi|147751673|gb|EDK58740.1| putative amino acid ABC transporter, permease protein [Burkholderia
           mallei JHU]
 gi|238525487|gb|EEP88915.1| urea ABC transporter, permease protein UrtC [Burkholderia mallei
           GB8 horse 4]
 gi|243065450|gb|EES47636.1| urea ABC transporter, permease protein UrtC [Burkholderia mallei
           PRL-20]
          Length = 340

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 46/343 (13%), Positives = 92/343 (26%), Gaps = 32/343 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + +A+G
Sbjct: 1   MGVPLAALVAPEASAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLFFALG 60

Query: 78  AYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
            Y+  +                                           ++ L       
Sbjct: 61  GYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPAALAW 120

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
            +         +     +I            Y  +  +          R   F  +    
Sbjct: 121 VFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAITSPGT 180

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              +          S      +  + +      IRD +     L  + +  KL  + VS+
Sbjct: 181 RTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVWVVSA 240

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
               +AGA +      I+P       +I +   V +GG  +L         + G   +  
Sbjct: 241 VLCAIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAKSVFT 300

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                           F       + +   LV L+    ++ L
Sbjct: 301 AY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 329


>gi|312961720|ref|ZP_07776218.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
 gi|311283979|gb|EFQ62562.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
          Length = 349

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 67/326 (20%), Positives = 131/326 (40%), Gaps = 16/326 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +    L F+ +    +  +++++ I  L+  +   GL+++ G  G  S+      A+GA
Sbjct: 23  LLGLLTLAFVVVPLWGNDYWLNAILIPFLVLSLAGLGLNLLTGYTGQTSVGAAGFMAVGA 82

Query: 79  Y-SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           + +Y  L     L + + +    +IS   G++ GLPS + +G YL + TL      + + 
Sbjct: 83  FATYGFLLRLPELGLPVALLGGGIISALVGLLFGLPSSRIKGFYLMVTTLAAQFFLEWLF 142

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +K+    N  +   ++     L                 +   +  Y++ L    L    
Sbjct: 143 VKFPWFYNYGSSGTISAPKLALFGH-------------DLNTPLGRYWLTLVTVLLLTWT 189

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRI 256
            L L R+ +   W  IRD   A   +   +   K  AFAVSS ++G+AGA +A A     
Sbjct: 190 ALNLVRSQVGRNWMAIRDMDTAAAVVGIPVARYKRLAFAVSSFYLGIAGALWAFAYLGTA 249

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           S   F  + +  ++ I+I+GGM S++      A +  +           F   +      
Sbjct: 250 SASSFDINRSFQILFIIIIGGMGSIAGNFVGAAFISLLPIFLSHAGQALFGGSVDAG-QL 308

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
                 +  + + + ++     L+RL
Sbjct: 309 QNLQKIIFGVLIIVFLIKEPEGLIRL 334


>gi|291532755|emb|CBL05868.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           (TC 3.A.1.4.-) [Megamonas hypermegale ART12/1]
          Length = 289

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 57/313 (18%), Positives = 114/313 (36%), Gaps = 41/313 (13%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               + +     + + ++ A  L+++ G  G  SL      A+GAY  VIL   +     
Sbjct: 5   IIGSFWELNIFLVCVNIIMAASLNLINGYTGQFSLGHAGFMAVGAYVGVILTVNFHSPFI 64

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + + +    +G  G ++GLP+L+ +GDYLAIATL + EI + +++  + +        + 
Sbjct: 65  VALLIGGFAAGILGFLIGLPTLRLKGDYLAIATLGLGEIIRIVIMNIEYVGGAAGFKGIP 124

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
               F                            +  +   +   I     +    +   +
Sbjct: 125 HNTTFPW--------------------------VFFIMLFTLFFIKNFVNSKYGRSCIAV 158

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R+N+ A  ++       K+ AF + + F G+ G  FA     I+P  F F  +   + +V
Sbjct: 159 RENEIAAEAMGVNTTKYKVMAFTIGAIFAGIGGGLFAHCFYIINPSSFTFMASFNFLIMV 218

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ S++       ++  V                     +         + L L++ 
Sbjct: 219 VLGGLGSITGSIAGAFVVTFVSAALAS---------------WPEFRMIAYALVLILLMF 263

Query: 334 MRSHSLLRLRTPS 346
            R   L      +
Sbjct: 264 YRPQGLFGYTEIT 276


>gi|284164842|ref|YP_003403121.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511]
 gi|284014497|gb|ADB60448.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511]
          Length = 368

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 54/307 (17%), Positives = 101/307 (32%), Gaps = 15/307 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y   +G   L Y +    L+ + G  G+LS   V  + IG Y++ ++           +
Sbjct: 49  YYAAEIGAVFLAYALLGVSLAFIWGYCGILSFGQVAFFGIGGYAFGVVAINVPTLTGATL 108

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            + A ++ +  +   L    F G    +   I++ +   +L  +   T G        RL
Sbjct: 109 GLLAAVAVSTLVAAALGYFMFYGGVRDVYVTILTLVVALVLYTFMGQTAGGEWAIGDARL 168

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFM-YYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                            S  +   I   YYV LG    +   +  L  +    A    R+
Sbjct: 169 GGFNGMSGVPDLGIGIGSIGLEIGIVGHYYVTLGALAATYLGLRALVNSRFGYAMVATRE 228

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++           F K + F +  A  G++G  F    + I P +F  +   + +    +
Sbjct: 229 DESRTEMFGYNTTFIKFAVFTIGGAIAGLSGVLFTTQNNYIDPSVFGITAAALPVVWASV 288

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG TSL     A   +  V                +   S +     ++   L  V+L+ 
Sbjct: 289 GGRTSLLGTVGAALAIQFVD--------------YQLALSGSEWALVIIGSLLVFVVLVM 334

Query: 336 SHSLLRL 342
              +   
Sbjct: 335 PEGVAPR 341


>gi|222082930|ref|YP_002542295.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727609|gb|ACM30698.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 349

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 65/328 (19%), Positives = 129/328 (39%), Gaps = 16/328 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L       + +L +    S    +++ +  L   +   GL+++ G  G +SL      A+
Sbjct: 20  LAPAAVIAVAYLVVPFIGSTYLYEAILVPFLALSLAGVGLNLLTGYAGQVSLGSAAFMAV 79

Query: 77  GAYSYVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GA++      R     + + I ++ + + A G++ GLPSL+ +G YLA++TL      Q 
Sbjct: 80  GAFAAYNFNLRVDGLPLIVSILLAGLCAAAVGIVFGLPSLRLKGFYLAVSTLAAQFFVQW 139

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L K+   +N  A   +                            +  Y   L +  +  
Sbjct: 140 ALTKFSWFSNDSASGVIDAPPLT-------------LAGVEFTGPVGRYLFSLTVVVVLT 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254
            +   L  +     +  +RDN+ A   +   ++  KL AFA+SS  I +AG  +A A   
Sbjct: 187 FLAHRLATSQTGRNFIAVRDNETAARIIGVPVLKTKLLAFAISSFIIAVAGVLWAFAYLR 246

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            + P  F    +  ++ I+I+GG+ S        A+++    +   +  +    L     
Sbjct: 247 TVEPAGFNLDRSFQILFIIIIGGLASTRGAFFGAALIVVFPLILSRLGSFLLGDLFDSGV 306

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
             +M    ++   + L +++    L  L
Sbjct: 307 -LDMSQRIVLGALIILFLILEPDGLSSL 333


>gi|331004944|ref|ZP_08328356.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [gamma proteobacterium IMCC1989]
 gi|330421242|gb|EGG95496.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [gamma proteobacterium IMCC1989]
          Length = 307

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 38/310 (12%), Positives = 89/310 (28%), Gaps = 14/310 (4%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                + + +       Y + A G ++V G +G+++      Y IG Y   I  +   + 
Sbjct: 5   FFYFLQQLLNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGTYVTFIAITGLTML 64

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
               +P+  + +    ++                    + +   I      I      + 
Sbjct: 65  GIEYMPLVILCALIIAIVASCSFGWAIERTAYRPLRGTNRLIPLISAIGMSIFLQNYLVQ 124

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                      + +    F   +           + +       ++  ++ ++ +  A R
Sbjct: 125 AQGARDIGLPPMITGGWSFGPDNFQASVSYMQLIIFIATAVSMLALTTFISKSKMGRACR 184

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +  + +    L         + F + +A   +AG         I+     F   +   +
Sbjct: 185 AVAQDLQMANLLGINTNRVISTTFVIGAALAALAGVLLGLYYG-IANPYIGFIAGLKAFT 243

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             +LGG+ S+        IL        G     +  ++ F               L L+
Sbjct: 244 AAVLGGIGSIPGAMLGGLILGVTESFTAGYFSAEYKDVVAFS-------------LLVLI 290

Query: 332 ILMRSHSLLR 341
           +L R   LL 
Sbjct: 291 LLFRPTGLLG 300


>gi|317125181|ref|YP_004099293.1| amino acid/amide ABC transporter membrane protein 2, HAAT family;
           amino acid/amide ABC transporter ATP-binding protein 1,
           HAAT family [Intrasporangium calvum DSM 43043]
 gi|315589269|gb|ADU48566.1| amino acid/amide ABC transporter membrane protein 2, HAAT family;
           amino acid/amide ABC transporter ATP-binding protein 1,
           HAAT family [Intrasporangium calvum DSM 43043]
          Length = 567

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 51/267 (19%), Positives = 106/267 (39%), Gaps = 33/267 (12%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY-----GLSIWLL 95
           +    + +  +FA+    V+   G LSL      ++ A++   L  R        ++ + 
Sbjct: 5   ATLTFVALGAIFAYSFYAVL-VAGQLSLGQAGFASLAAFTAASLTPRPSEVGEIPALLIA 63

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           I +  ++  A  +++GLP++  RG +LAIATL  +E  + +++  +  T G  G+ V   
Sbjct: 64  IVIGMVVGSAAAVVLGLPTMHLRGVFLAIATLAFAEAVRILILNQEW-TGGAQGMSVPKV 122

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           L                             +   +  + A     + R+    A   IR+
Sbjct: 123 LTPG--------------------------IAWAVLAVVAYWFARMGRSRYGRALEAIRE 156

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  ++   +   +L+AF  + A  G+ G  +A     I+P+ F F+  I  +   ++
Sbjct: 157 DELAARAMGIDVGRHRLAAFTTAGAVAGLYGVLWAYYVRLIAPEDFGFTAAIDGLVTAVV 216

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMN 302
           GG T        +     + E+   + 
Sbjct: 217 GGSTMFVGPLLGSGFQTLIPEIQRALG 243


>gi|192289855|ref|YP_001990460.1| urea ABC transporter permease [Rhodopseudomonas palustris TIE-1]
 gi|192283604|gb|ACE99984.1| urea ABC transporter, permease protein UrtC [Rhodopseudomonas
           palustris TIE-1]
          Length = 383

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 40/328 (12%), Positives = 94/328 (28%), Gaps = 36/328 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL----------- 84
             +  ++  + L Y   A GL +  G  G+LSL   + + +G Y   +            
Sbjct: 31  DVFRLNLVAKYLTYAFVAIGLVLCWGFGGILSLGQGVFFGLGGYCMAMYLKLEASSVENT 90

Query: 85  -GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
                      +                  ++      +  A             +   +
Sbjct: 91  KIQSTPGIPDFMDWNQITQIPWFWQPFHSLTITVIAILVVPAVFAFLIGAAMFKRRVGGV 150

Query: 144 TNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLLGMCFL 193
                   +A  +  L    +                 +       ++ +Y+V +   F 
Sbjct: 151 YFAIITQAIAAIMTILIIGQQGYTGGINGITDLRTLKGWDIRPDHAKVVLYFVEVAFLFG 210

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  + L++R + +      +R+ +        ++   K+ AF +++ F  + GA F  + 
Sbjct: 211 AILLALFVRHSKLGRILVAMREKEDRVRFSGYSVANFKIFAFCLAAMFAAVGGAMFTLNV 270

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             +SP       +I ++    +GG  S+      T ++                      
Sbjct: 271 GFMSPSFVGIVPSIEMVIYTAVGGRLSIFGAIYGTLLVNFAKTSLSE------------- 317

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
            SF       +      V+L+  + L  
Sbjct: 318 -SFPQLWLFGLGALFIAVVLIFPNGLAG 344


>gi|118477395|ref|YP_894546.1| branched chain amino acid ABC transporter permease [Bacillus
           thuringiensis str. Al Hakam]
 gi|118416620|gb|ABK85039.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bacillus thuringiensis str. Al Hakam]
          Length = 342

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 61/334 (18%), Positives = 132/334 (39%), Gaps = 31/334 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 24  VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 83

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  R      + ++ I  + +IS     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 84  VALLFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 143

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YYV L    +   +
Sbjct: 144 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 184

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 185 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 244

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L  +    
Sbjct: 245 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 295

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            R T ++ +   +V+L+    L+        ++R
Sbjct: 296 ERWTIILGLLYIIVLLVFPKGLVGTVKSLKNMKR 329


>gi|39934327|ref|NP_946603.1| putative high-affinity branched-chain amino acid transport system
           permease [Rhodopseudomonas palustris CGA009]
 gi|39648175|emb|CAE26695.1| putative high-affinity branched-chain amino acid transport system
           permease protein [Rhodopseudomonas palustris CGA009]
          Length = 383

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 40/328 (12%), Positives = 94/328 (28%), Gaps = 36/328 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL----------- 84
             +  ++  + L Y   A GL +  G  G+LSL   + + +G Y   +            
Sbjct: 31  DVFRLNLVAKYLTYAFVAIGLVLCWGFGGILSLGQGVFFGLGGYCMAMYLKLEASSVENT 90

Query: 85  -GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
                      +                  ++      +  A             +   +
Sbjct: 91  KIQSTPGIPDFMDWNQITQIPWFWQPFHSLTITVIAILVVPAVFAFLIGAAMFKRRVGGV 150

Query: 144 TNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLLGMCFL 193
                   +A  +  L    +                 +       ++ +Y+V +   F 
Sbjct: 151 YFAIITQAIAAIMTILIIGQQGYTGGINGITDLRTLKGWDIRPDHAKVVLYFVEVAFLFG 210

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  + L++R + +      +R+ +        ++   K+ AF +++ F  + GA F  + 
Sbjct: 211 AILLALFVRHSKLGRILVAMREKEDRVRFSGYSVANFKIFAFCLAAMFAAVGGAMFTLNV 270

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             +SP       +I ++    +GG  S+      T ++                      
Sbjct: 271 GFMSPSFVGIVPSIEMVIYTAVGGRLSIFGAIYGTLLVNFAKTSLSE------------- 317

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
            SF       +      V+L+  + L  
Sbjct: 318 -SFPQLWLFGLGALFIAVVLIFPNGLAG 344


>gi|319946503|ref|ZP_08020739.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus australis
           ATCC 700641]
 gi|319747334|gb|EFV99591.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus australis
           ATCC 700641]
          Length = 292

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 105/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L +   ++ ++ + +
Sbjct: 8   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMVGAFMGYFLLNSLKVNFFVALLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +       IA LI +     +L        G            
Sbjct: 68  AMVGTAILGVVIEYLAYRPLRHSTRIAALITAIGVSFLLEYGMVFFVGANTRS------- 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I   R+    +        +L    FL  ++   +++T +  A R +  +  
Sbjct: 121 ----FPQVIETVRYNFGPISISNIQLMILGVSIFLMVALQFIIQKTKMGKAMRAVSVDSD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G  G       + I P M   +  I      +LGG+
Sbjct: 177 AAQLMGINVNRTISFTFALGSALAGAGGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +      +               +     ++   L +++L+R   
Sbjct: 236 GIIPGAALGGFVIGLLETFATAIG-------------LSDFRDAIVYAILIVILLIRPAG 282

Query: 339 LLR 341
           +L 
Sbjct: 283 ILG 285


>gi|313126034|ref|YP_004036304.1| ABC branched-chain amino acid transporter, permease component
           [Halogeometricum borinquense DSM 11551]
 gi|312292399|gb|ADQ66859.1| ABC-type branched-chain amino acid transport system, permease
           component [Halogeometricum borinquense DSM 11551]
          Length = 456

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 62/397 (15%), Positives = 132/397 (33%), Gaps = 62/397 (15%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQ-ILIYVMFAWGLSIVVGSLGLLSLNCV 71
            +L +    Y L+      + + Q    ++    I ++ M A  L++  G  GL ++  V
Sbjct: 21  AVLLVTYAAYVLVGVGLGYSLRGQLNTIAVLTFYIGVFAMLALALNLHWGYTGLFNIGIV 80

Query: 72  IAYAIGAYSYVILGSRYGLS------------IWLLIPVSAMISGACGMIMGLPSLKFRG 119
              A+G Y   +                    + + I    + +   G+++ LP+L+ R 
Sbjct: 81  GFMAVGVYVMALFSKPAYTPGGAAQVGGLGLPLIIGIIAGMVAAALLGLVVALPALRLRA 140

Query: 120 DYLAIATLIMSEIFQNILIK----------WKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           DYLAI T+ MSEI +   +            +    G +G+ +              +  
Sbjct: 141 DYLAIVTIAMSEIVRFSFLSGDLQQFQLLGNRVGFGGGSGLILDFTDPLQALFQSVGLWG 200

Query: 170 FRFPSS------------FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                              V+  +    +LL        ++     +      + IR+++
Sbjct: 201 AYLGFVDAFTVIVPTNPKPVVDGLVYGLILLLFVGAYFWLLKRTGESPFGRVLKAIREDE 260

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               SL       K+ +F +  A +G+AG F+  ++  ++P+ F+      V   +I+GG
Sbjct: 261 DVANSLGKDTNQFKIKSFMLGCALMGLAGIFWLMTQGAVTPNFFRPRVTFFVWIALIIGG 320

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN-------------------- 317
             S +      A+   V+           +++L    + +                    
Sbjct: 321 AGSNTGSVLGGAVFAAVLYQGPRYFKNLIDTVLPSTDAPSGFGQAVGPLISNIDPAPLFF 380

Query: 318 -------MRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                       +M + L  ++  R   +L  R  + 
Sbjct: 381 YTVDSIRQLQLVIMGLVLIWLMHNRPEGMLGYRKETA 417


>gi|126665342|ref|ZP_01736324.1| ABC-type branched-chain amino acid transport system [Marinobacter
           sp. ELB17]
 gi|126629970|gb|EBA00586.1| ABC-type branched-chain amino acid transport system [Marinobacter
           sp. ELB17]
          Length = 318

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 58/326 (17%), Positives = 111/326 (34%), Gaps = 26/326 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +    + ++        +S  +       ILI  +F   L  +VG +GL++L   + Y +
Sbjct: 10  IFLATFFIIALCIPLFLESNSFFVGKATTILILAIFVMSLDFLVGRVGLVTLGHALFYGL 69

Query: 77  GAYSYVILGSRYG-LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           G Y +VIL   Y  ++ W+       +S    +++G+  L+  G Y  + TL +S++   
Sbjct: 70  GGYLFVILTPEYEAVNFWIYAIYVMCVSAFVALVVGVVVLRTSGIYFIMITLAISQMVYY 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                     G                       F      +      YY+ L    ++ 
Sbjct: 130 FFFDSLHFGGGDGLFIFIKPDTS----------IFGLSFLNLDNPTHFYYLALLGVLITL 179

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             I  + R+         R N     +L   I   KL ++ + S     AG  FA     
Sbjct: 180 LTIKIVLRSRFGRIVEASRLNPARTEALGYNIFSFKLISYVIGSTLAAYAGLLFALQYGY 239

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P    +  +   + + ILGGM ++      T    G+      M+  +          
Sbjct: 240 VNPQFMTWEMSGTALVMSILGGMGTIYGAILGTITYEGLQYFFEHMSKDW---------- 289

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                   M  ++ L++L+    L  
Sbjct: 290 -----MLFMGGSIILMVLLLRKGLAG 310


>gi|157369665|ref|YP_001477654.1| inner-membrane translocator [Serratia proteamaculans 568]
 gi|157321429|gb|ABV40526.1| inner-membrane translocator [Serratia proteamaculans 568]
          Length = 526

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 83/288 (28%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++   +       + +  +++      +       
Sbjct: 253 ITYGLLGVINMAHGEMLMLGAYSAYLVQGLFQQFAPQWLALYPLVALPVAFGITACIGMA 312

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + V      +     + +         +
Sbjct: 313 LER--TVIRHLYGRPLETLLATWGISLVLIQCVRVLFGAQNVEVANPAWLSGGIQLLPNL 370

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+L +  +     L L +T +    R +  N+              + AF +
Sbjct: 371 VLPWNRIAVILFVVLVLVLTWLLLNKTRLGMNVRAVTQNRAMAACCGVPTGRVDMLAFGL 430

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+LGG+  L+    A   L  + ++
Sbjct: 431 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGTVVAAFGLGILNKI 488

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                    L++  + L I  R   L   +  
Sbjct: 489 LEPQIGAVLGK-------------ILILALIVLFIQKRPQGLFAFKGR 523


>gi|268325335|emb|CBH38923.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein [uncultured archaeon]
          Length = 317

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 62/310 (20%), Positives = 132/310 (42%), Gaps = 17/310 (5%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           VV  +L FL       ++Y+ ++ I +L++ M++   +++  + G  SL     + IG Y
Sbjct: 14  VVTLILAFLLPLILGIKQYLLTVLILMLVFTMYSSAWNLLA-TSGQGSLGHAAFFGIGGY 72

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              I+ + +GL + L I +    +   G+++GL  ++ +  +LA+ T   + I Q + ++
Sbjct: 73  VSAIISNSFGLPVILTIVIGGFFAAVIGVLIGLTCVRLKAWFLAMVTFGFAIIVQTVTVE 132

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +T G  GI                      P +   + ++ YY++L +  +   II 
Sbjct: 133 LSGLTGGWDGIPA----------------KKLVPVTITNHVMYEYYIILLIAVVVIVIIY 176

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            + ++ +  A   IR+N+     +   +   KL AFAVS+ F G+AGA        ++P+
Sbjct: 177 LIMKSKMGLALEAIRENELEAKVMGINVTVYKLKAFAVSAFFTGIAGALEIHHFGYVTPE 236

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           ++    +   I   + GG+ ++      T ++  + E+       Y   +L       + 
Sbjct: 237 VYGIDISFWPIIYSVSGGLYTIGGPILGTVVITAIWEVLRSFGMTYGRFILIGLILILIV 296

Query: 320 HTTLMVIALF 329
                 +   
Sbjct: 297 IFLPKGLISI 306


>gi|108803213|ref|YP_643150.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
 gi|108764456|gb|ABG03338.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
          Length = 296

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 98/305 (32%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + + GL+++ G L +L+       A+  Y+  +L +  G   +L + V
Sbjct: 6   LVTGLLLGGVYSLVSMGLTLIFGVLDILNFAHGAFMALAMYASFVLVANAGFDPYLSLLV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S  +    G+++    L    D      L+++     ++     +        V      
Sbjct: 66  SVPLLFVLGVLVQRVLLARVMDQPHENQLLLTFGLALLIENALLMVFTATPRTVEFPYAQ 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  +              + ++      LG   ++  +   LRRT++  A R + +N  
Sbjct: 126 TGIPLGFATVRGPLDVFGAVADLPRVIAFLGSLVIAGGLFYLLRRTSLGTAIRAVAENPD 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    + AF + +A +  AG                   N+I   +V+LGG+
Sbjct: 186 GAAMVGIDVRRMHMIAFGLGTACVAAAGTLVLPFLSL--QPTTGEQFNVIAFVVVVLGGL 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        ++  V EL              F                      R   
Sbjct: 244 GNVVGALVGGILIGLVQELGGAFVPGVDKLFFVFVVFVLTLLL-------------RPQG 290

Query: 339 LLRLR 343
           L   +
Sbjct: 291 LFGGK 295


>gi|238794092|ref|ZP_04637709.1| Branched-chain amino acid transport system, permease component
           [Yersinia intermedia ATCC 29909]
 gi|238726597|gb|EEQ18134.1| Branched-chain amino acid transport system, permease component
           [Yersinia intermedia ATCC 29909]
          Length = 519

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 80/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++ S +       + +  +++      +       
Sbjct: 246 ITYGLLGVINMAHGEMLMLGAYSAYVVQSLFQQLAPHWLALYPLVALPVAFFITAGIGMA 305

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      L     + +         +
Sbjct: 306 LER--TVIRHLYGRPLETLLATWGISLMLIQSVRMIFGAQNLEVANPAWLSSGVQILPNL 363

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+  +  +     L L +T +    R +  N+              + AF +
Sbjct: 364 VLPWNRIAVIAFVIIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGRVDMLAFGL 423

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+LGG+  L+    A   L  + ++
Sbjct: 424 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 481

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 482 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 516


>gi|187478387|ref|YP_786411.1| high-affinity branched-chain amino acid ABC transporter permease
           [Bordetella avium 197N]
 gi|115422973|emb|CAJ49503.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Bordetella avium 197N]
          Length = 308

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 102/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
             +      IY + A G ++V G +G+++      Y IGAY  ++  +            
Sbjct: 12  FFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGTSSGIPLPF 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            I  ++ V+ +++G  G  +   + +       +  LI +      L  W  +  G    
Sbjct: 72  IIAAMLVVAIVVTGVYGYTVERVAYRPVRGSPRLVALISAIGMSIFLQNWIALGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   + + +   ++F       V        +++    L  ++ L+++ + +  A 
Sbjct: 129 ----RDMAVPSLISGALQFHMGSGFDVTVPYSRVMIIVVTVILMIALTLFIKYSRLGRAS 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    +      L           F + +    + G   A +  +++     F   I   
Sbjct: 185 RACSQDMHMAKLLGIDTNRVISFTFVMGAGLAAVGGILIAITIGKLN-PFIGFLAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L              +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAAYISSQYKDIVAFG-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|91788944|ref|YP_549896.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91698169|gb|ABE44998.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter membrane protein 1,
           HAAT family [Polaromonas sp. JS666]
          Length = 623

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 58/323 (17%), Positives = 121/323 (37%), Gaps = 34/323 (10%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            +  +L+ L   A +   Y  ++    LI ++F   L  ++   GL+S      +A+G Y
Sbjct: 319 AIAAVLVLLSGLAWQGGAYWQTLAADALILLIFGISLQSMMALGGLVSFGHAAFFALGGY 378

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +  S +G S+ + +    + +     + G   ++  G YLA+ +L ++++      +
Sbjct: 379 GAALSHSLWGASLPVALAAGCVTALVVAAVFGAAVVRSAGVYLAMLSLALAQVIWAGATQ 438

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W  +T G  G                                  + +L+ +       + 
Sbjct: 439 WVSLTGGDNG-------------------LIGLALVEEEGRPLFFALLVVLALACVLALR 479

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L R+ +  A + +RD      +    + + K   F  S+   G+AG  FAA +  + P 
Sbjct: 480 LLSRSVMGAALQAVRDAPARAAASGLPVGWLKYRVFLESAVLAGLAGGLFAAHKGAVFPS 539

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +   + ++  + +V+LGG+  L      +A+L  V         Y+              
Sbjct: 540 IAAVATSVDALLVVLLGGVHQLWGAVVGSAVLSYVSAELGREVTYWRG------------ 587

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
              L+ + + LV++     LL L
Sbjct: 588 ---LLGLFIMLVMVASPSGLLGL 607



 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 85/304 (27%), Gaps = 19/304 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +           + A GL+++ G   +++      + +GA       + +  + W     
Sbjct: 8   LLGGLSYATTLFLMAAGLTLIFGVTRIVNFAHGSFFMLGALFTAHWVTEWFPA-WGESAP 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +++   G              L        E++Q +      +    A  +       
Sbjct: 67  LYLLAILFGAACAGLVGALADFLLLRRMSGAPELYQLVATFGLTLALHDAMQWGFGPDEV 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L            + ++   ++     +   + L LR +      R    ++ 
Sbjct: 127 FAPRFPGLK--GSVQMGDEFFPVYQLVMIALGPLVWLGLHLLLRHSLFGRRLRAATQDRS 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L        L A  +  A  G+ GA                +  +    +V+ GG+
Sbjct: 185 MLAALGVNPKPLMLGAVVLGCALAGLGGALQLPREPA--HLQMDMNVIVETFVVVVTGGL 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++  V  L   +                     ++ + +  V+++R   
Sbjct: 243 GSIGGAFVAALLIGLVHALGIAV--------------LPQATLVIVFLTMAAVLVLRPQG 288

Query: 339 LLRL 342
           L  L
Sbjct: 289 LNGL 292


>gi|317404152|gb|EFV84598.1| urea ABC transporter [Achromobacter xylosoxidans C54]
          Length = 313

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 65/322 (20%), Positives = 134/322 (41%), Gaps = 25/322 (7%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L++   +       +  ++ + + ++   +   +IV G  G LSL   + Y IG Y+
Sbjct: 14  LILLIVMFIVPIATGTPFWTNLFVLLFVFSALSVAWNIVGGYAGQLSLGHAVFYGIGGYT 73

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +L   +G+S W  + V A IS    +I+  P+L+ RG + A+AT+ + E+ + ++I  
Sbjct: 74  ATLLTQNFGISPWFGMLVGAAISAVVAIIISYPTLRLRGPFFALATIAILEVVRLLVIHE 133

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           +  T G +GI +   + +     R               +I    +  G+  L   +  +
Sbjct: 134 ESWTGGSSGISLPLNIGWAWIVFRE--------------KINYVIIAFGLFLLVTWVSWY 179

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +R++ I +    IR+ + A  ++    +  K+ A  VS+    + G F       + P  
Sbjct: 180 IRKSRIGHYLIAIREREDAALAVGIHTVRVKIIAAVVSAMLTSIIGTFHITYLTFVDPSS 239

Query: 261 -FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F    +I V    ++GG+ +++     T +++ + EL  G      N +          
Sbjct: 240 AFSLELSIQVAMFALIGGLGTVAGPIAGTFLVLPIAELARGWLSSVGNGM---------- 289

Query: 320 HTTLMVIALFLVILMRSHSLLR 341
           H  +  + L  V+L     L  
Sbjct: 290 HGLIYGLILVAVVLTIPRGLAG 311


>gi|167571778|ref|ZP_02364652.1| putative branched-chain amino acid ABC transporter integral
           membrane subunit [Burkholderia oklahomensis C6786]
          Length = 324

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 50/302 (16%), Positives = 120/302 (39%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS    +  A   Y         G +  L +     
Sbjct: 26  FVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGTTPELGVLAGTA 85

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+++GL +++ +G Y A+ TL  +++   I ++                      
Sbjct: 86  AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 131

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  ++ +YYV+L +   +   I+ +  +        I++N+    
Sbjct: 132 GLQGVPRGRLFGLVDLSSDLALYYVVLVVIACACFFIVRIVHSPFGQVLVAIKENEPRAT 191

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+   G+AGA         +     ++ + +V+ + ++GGM +L
Sbjct: 192 SLGYDTDRFKLLAFILSAGLAGLAGALKVVVLGFETLSDAYWTMSGLVVLMTLVGGMGTL 251

Query: 282 SKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +    +  +    + + +  S     T +  +     +L     ++
Sbjct: 252 FGPLVGAALIVALEDRLGDIGGWLASATGIDWFRSLGESATIVTGLIFIACVLAFRRGIV 311

Query: 341 RL 342
             
Sbjct: 312 GE 313


>gi|148254035|ref|YP_001238620.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146406208|gb|ABQ34714.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 330

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 46/332 (13%), Positives = 114/332 (34%), Gaps = 29/332 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
               L  + V    L  +      ++ +  ++  +  +  ++A  L+++ G  GLLS   
Sbjct: 15  RTSALVTIGVGALALAAILAAPWLAKPFTITLLTEAFVLAIWAMSLNLLSGHAGLLSFGH 74

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
              + +G Y+           + L +  +  +      + G  +++  G   +I +L ++
Sbjct: 75  AAGFGLGGYAAGYFAREVSADVILSLLFAEAVVFIVAALAGAVAIRLSGVAFSIVSLCIA 134

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           ++   + I W+ +T G  G+                    R   + +      Y ++  +
Sbjct: 135 QVLYQVAIAWRAVTEGMDGLLGVPLP--------------RLFGATIKNGAPFYILVSVV 180

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              + + +  + ++      R IR N     S+   +   K  AF +S    G+AG    
Sbjct: 181 MMATLAGLALVLKSPFGATLRAIRTNDIRAASIGIDVRLHKWLAFVISWMLAGLAGGLMV 240

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             +   +P    +SE+  V+ + I GG+ ++          + + ++             
Sbjct: 241 FLKAGTTPMSLHWSESGNVLIMTIFGGLGTIVGPVLGAVCFVFLHDVLTSTL-------- 292

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                       +  +   +V++     L  L
Sbjct: 293 -------AIWQFVFGLIFVVVVIAFPSGLAGL 317


>gi|134291188|ref|YP_001114957.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|134134377|gb|ABO58702.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia vietnamiensis G4]
          Length = 357

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 100/295 (33%), Gaps = 12/295 (4%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
            +       Y+ S     LI  + A    ++ G  G+L+L     + +GAY + +   ++
Sbjct: 37  LILPFCLGPYLLSTVRDALIMGLLALSYDLLWGRAGVLTLGHTTFFGLGAYGFAVATVQF 96

Query: 89  GLSIWLLIPVSAM--ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
           G +  +   V     ++ A  +   L     R  + AI ++ +  + Q +   W+ +T G
Sbjct: 97  GQTPVIGFIVGLFGAMAVAVVLGYFLLFAGVRLHFFAIISMAVLIVVQQLATSWQSVTGG 156

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             G+     L F                  +      +Y++  +  +       + R+  
Sbjct: 157 DTGLLGIPGLSFSLIGHT----------VDLSGASGAWYMVAAVLAMLLLTTWLVCRSRY 206

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                 I  N+    +         L  F  S+    +AG   AA    ++PD+F     
Sbjct: 207 GKVLSAIATNEWRAKACGYHTSAHLLLVFTASAGLAAVAGVLMAACSGVVAPDVFSPVLA 266

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             VI  V +GG  +L     A   L  + +    ++   +  LL       +   
Sbjct: 267 TEVILWVAIGGRGTLGGPVLAAVALTLLKQAVSSVSTDGWPLLLGGVFLGCVLFL 321


>gi|294010932|ref|YP_003544392.1| branched-chain amino acid transport system permease protein
           [Sphingobium japonicum UT26S]
 gi|292674262|dbj|BAI95780.1| branched-chain amino acid transport system permease protein
           [Sphingobium japonicum UT26S]
          Length = 370

 Score = 82.6 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 50/341 (14%), Positives = 97/341 (28%), Gaps = 34/341 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A     L+           Y  ++  + L   + A GL ++ G  G+LSL   + + +G 
Sbjct: 10  AATGVALILAIAAPWLLSAYDLNLLARFLALSLTAMGLVLIWGEGGILSLGQGVFFGLGG 69

Query: 79  YSYVI-----------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           Y+  +                       L  W  +  S   + A  +++           
Sbjct: 70  YALAMHLKLAGLAEGELPDFMIWSGTEALPWWWSLVKSPFAAVAAVLVVPTALGALMAWA 129

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           +    +         LI           +     L      +      F F  +     +
Sbjct: 130 IFRRRIG---GVYFALITQALALAFATLLVSQQGLTGGFNGLTDYQTLFGFNLNLPSTTL 186

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +Y++ L +       + WL  +      R  RD       L       K+ AFAV++  
Sbjct: 187 ALYFITLALVVAGLLGLRWLLASRYGKLLRASRDGANRMRFLGYDPTPYKVIAFAVAALL 246

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            GM+GA F      +SP +     +I ++    +GG  SL        ++    +     
Sbjct: 247 TGMSGALFTLHAGVVSPALVGVVPSIEMVIWAAIGGRNSLIGAIAGALLVNFAKDKISTA 306

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +                 +       + +    L  L
Sbjct: 307 MPEVWLYG--------------LGALFIAAVTILPQGLAGL 333


>gi|295705057|ref|YP_003598132.1| putative branched-chain amino acid ABC transporter permease
           [Bacillus megaterium DSM 319]
 gi|294802716|gb|ADF39782.1| putative branched-chain amino acid ABC transporter, permease
           protein [Bacillus megaterium DSM 319]
          Length = 328

 Score = 82.6 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 103/315 (32%), Gaps = 18/315 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-----------SYVILGSR 87
           +        +Y + A G ++V G L L++      +  GA+              I+   
Sbjct: 13  LIDGLTLGAVYAIIALGYTMVYGILELINFAHGEIFMSGAFIGTAILIGLTGVGWIVAFP 72

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             +++ L++ ++++ +G  GM +   + +       + TLI +     +L  +       
Sbjct: 73  AVVTLILVLLITSVATGFLGMGIERVAYRPLRKSSKLITLITAIGMSFLLQDFVRFITEL 132

Query: 148 -AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             G Y+ +        +               +++    VL+    L   + +++ RT  
Sbjct: 133 KNGNYIVNTPALFSGKISVSASSLSSSFDDATFKVTFIVVLIVALCLMIGLEIFVNRTKW 192

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A R +  +      ++  +       F + SA  G  G  FA     I P    F   
Sbjct: 193 GMAMRAVAQDPDTASLMSINVNKVISLTFFIGSALGGATGVLFALHYGTIDPY-IGFILG 251

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           +   +  +LGG+ ++        +L  +             ++L                
Sbjct: 252 LKAFTAAVLGGIGNIRGAMFGGLMLGILEMFAAANLSTITGNILG-----AEYKDVFAFA 306

Query: 327 ALFLVILMRSHSLLR 341
            L LV++ +   L  
Sbjct: 307 ILILVLIFKPEGLFG 321


>gi|228920664|ref|ZP_04084007.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228838965|gb|EEM84263.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 317

 Score = 82.6 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 59/322 (18%), Positives = 127/322 (39%), Gaps = 31/322 (9%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY   +
Sbjct: 2   LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61

Query: 84  LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           L  R      +  + I  + +IS     I+GL SL+ +  + A+ TL +S++F  +  KW
Sbjct: 62  LFDRQGVSITNFLIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T+G  G        F                         YYV L    +   ++  
Sbjct: 122 RGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVLLRL 162

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++  +
Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVNTTV 222

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F     +  + + ++GG+ +L            +       +  Y+ S L  +     R 
Sbjct: 223 FSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIFERW 273

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
           T ++ +   +V+L+    L+  
Sbjct: 274 TIILGLLYIIVLLVFPKGLVGT 295


>gi|283782295|ref|YP_003373050.1| inner-membrane translocator [Pirellula staleyi DSM 6068]
 gi|283440748|gb|ADB19190.1| inner-membrane translocator [Pirellula staleyi DSM 6068]
          Length = 326

 Score = 82.6 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 47/325 (14%), Positives = 108/325 (33%), Gaps = 33/325 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS---------- 80
                 + +        +  + A G ++V G +GL++      + +G++           
Sbjct: 14  PFGTFLQQVLIGLTNGSLIALIALGYTMVYGIIGLINFAHGDLFMLGSFFALTVISLILG 73

Query: 81  ----YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                    +   L+I++ + +  +   +  + +     K   +   +A L+ +     I
Sbjct: 74  VAGGESSSAAFIFLAIFVSLVLVPLFCASLNVTVDYIIYKPLRNAPKLAPLVSAIGVSFI 133

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            +    +  G + ++  + L      +  LI +     +          V+L    +   
Sbjct: 134 FMNAGLLWRGASPVHFPNILPGGNYNLFELINYESIRFTVKDLT-----VILITVPVMVG 188

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           + L+++ T +  A R    +Q A   +   +       F +  A  G+A   +  + + +
Sbjct: 189 LTLFVKYTKLGTAMRATEQSQLAARLMGINVDRVIAVTFGIGGALAGVASVIYGLTINTV 248

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           S  M  F   I   +  +LGG+ SL        I+  V  L        + + L F    
Sbjct: 249 SFQM-GFQNGIYAFTAAVLGGIGSLPGAMLGGLIIGLVRSLGSEYIGENWTNALIFS--- 304

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                      L  +++ R   LL 
Sbjct: 305 ----------ILIAILVFRPSGLLG 319


>gi|270262691|ref|ZP_06190962.1| transporter [Serratia odorifera 4Rx13]
 gi|270043375|gb|EFA16468.1| transporter [Serratia odorifera 4Rx13]
          Length = 304

 Score = 82.6 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 89/304 (29%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P+
Sbjct: 9   LINGLTLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIGLALLSFFGLHSFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLVFTIVITGVYGWVIERIAYKPLRNSTRLAPLISAIGMSLILQNYAQISQGPRQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+   +    F    +       ++L+      A +   ++ T +    R  + ++K
Sbjct: 129 GIPTLLDGVFRIGFDGGVIQITYTKVFILVASLLGMAILTYVIQHTRLGRICRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A  G+AG     +       +  F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISLVFVIGAAMAGLAGVLITMNYGTFDFYV-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        +L        GM    +  +  F               L ++++ R   
Sbjct: 248 GSLPGAMLGGLLLGVAEAQFAGMVNSDYKDVFSFG-------------LLVVILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|237654578|ref|YP_002890892.1| urea ABC transporter permease UrtB [Thauera sp. MZ1T]
 gi|237625825|gb|ACR02515.1| urea ABC transporter, permease protein UrtB [Thauera sp. MZ1T]
          Length = 543

 Score = 82.6 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 86/290 (29%), Gaps = 17/290 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       +GAY+  ++   +       +    + +     +        
Sbjct: 269 ITYGVMGVINMAHGELLMVGAYATFLVQGVFRAHFPEYLDFYVLAAIPAAFLAAALVGIA 328

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     +++L  W           V      L     S +      +  V
Sbjct: 329 MER--LVLRHLYGRPLESLLATWGLSLVLIQAARVLFGPQNLELANPSWMSGGVELAGGV 386

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       +L    F+   I L +++T +    R +  N+     +          AFA+
Sbjct: 387 VLPYNRIVILGFAAFVLVLIWLMMQKTRLGMFVRAVTQNRPMAGCVGVPTARVDTLAFAI 446

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+             +    +V+LGG+  L+    A   L  V + 
Sbjct: 447 GSGVAGLGG--LALSQIANVGPAMGTGYIVDAFMVVVLGGVGQLAGAVWAALGLGIVAKF 504

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
             G                      L+++ +   I  R   +  L+    
Sbjct: 505 LEGWAGAVVAK-------------ILVLVFIIAFIQKRPQGIFALKGRFA 541


>gi|311103796|ref|YP_003976649.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310758485|gb|ADP13934.1| inner-membrane translocator 11 [Achromobacter xylosoxidans A8]
          Length = 321

 Score = 82.6 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 64/330 (19%), Positives = 135/330 (40%), Gaps = 30/330 (9%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I+  + ++  L +F  +       +  S   ++LIY + A  L++++G  G+++L    
Sbjct: 3   SIIWTVVLLAALAVFPLVAPALGLDFYISFVRRVLIYALAATSLNLILGYGGMVALGHAA 62

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            +  GAY+  IL      S  ++ P + +++     I G  SL+ RG Y  + TL  +++
Sbjct: 63  FFGAGAYAVGILAMSGVTSALIVWPAAMLLAAVLACITGAISLRTRGVYFIMITLAFAQM 122

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
              I I  +                       +L  +   P   + +++  YY++L +  
Sbjct: 123 LFYIFISLRQYGG---------------EDGLNLPGYSTLPGIDLAHDVSFYYLVLALFA 167

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   +   +  +    A + IR+N+    S+   +   KL AF +S A  G+AGA  A  
Sbjct: 168 LIMWVFSRVVASRFGTALQGIRENESRMESMGYPVYRIKLMAFTLSGAVAGLAGALLANH 227

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              ISP +  ++++  ++ +V++GG+           +++ + E+      Y+       
Sbjct: 228 NLFISPSLMHWTQSANLLIMVLVGGIGLRYGGVAGAVVMLTLEEVLRLWTEYWH------ 281

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                      + + L  V+      L+ L
Sbjct: 282 ---------LPLGVLLLCVVFGAPRGLVGL 302


>gi|302188759|ref|ZP_07265432.1| inner-membrane translocator [Pseudomonas syringae pv. syringae 642]
          Length = 529

 Score = 82.6 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 315

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 491

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526


>gi|221635489|ref|YP_002523365.1| ABC transporter ATP-binding protein [Thermomicrobium roseum DSM
           5159]
 gi|221157819|gb|ACM06937.1| ABC transporter ATP-binding protein [Thermomicrobium roseum DSM
           5159]
          Length = 326

 Score = 82.6 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 58/326 (17%), Positives = 116/326 (35%), Gaps = 29/326 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            +     +L  L   A  S  ++  +     I+ + A  L ++ G  G++SL  +    +
Sbjct: 5   AVVAALIVLALLSFPAWGSPYFVGRIFTPAFIFGVIALSLCLLAGYGGMVSLAQMTLAGL 64

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
             Y Y  L    G   W+ I    +++     + GL +++  G Y  + TL +  +   +
Sbjct: 65  AGYGYGHLTVMQGQPWWVGILGGIVLATVVAFLFGLIAVRSSGIYFLMITLALGMVVYAL 124

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
             + +    G  GI         G  +                 +  YY+ L +   + +
Sbjct: 125 ANQNRSFFGGHTGILGIRPPELFGHALTER--------------VPFYYLCLVVGLATYA 170

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++ +L RT    A   +RDN +   +L   +   +++AF ++    G+ G         I
Sbjct: 171 LVRYLARTPFGLALVALRDNPRRLAALGFHVALHRVAAFTLAGFLAGVGGLLLVWYNGAI 230

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP     +  I ++ I ++GG+           + + V                 F  SF
Sbjct: 231 SPTTIDLTRLINIMVIAVIGGLMYAEGAFLGALVFVLVTN---------------FASSF 275

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
             R  T++ +     +L     L  L
Sbjct: 276 TQRFNTVIGLVFLATVLFSPEGLSGL 301


>gi|92114432|ref|YP_574360.1| inner-membrane translocator [Chromohalobacter salexigens DSM 3043]
 gi|91797522|gb|ABE59661.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 350

 Score = 82.6 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 47/329 (14%), Positives = 101/329 (30%), Gaps = 15/329 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  V  L       A      + S+  + L Y++ A  + ++ G LG+LSL     
Sbjct: 25  LIVGMLAVVVLHALPPDHAWHLNGSVVSLLGKYLTYMLLALAVDLIWGYLGILSLGHGAF 84

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +A+G Y+  +  +    +                + + L        +  +A        
Sbjct: 85  FALGGYAMGLYLTA-QQAPLAPWQAVMAHFPVAALAVILAPGLLALVFGWLAFRSRVTGV 143

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
              +I               +      T +        F  +     + ++        L
Sbjct: 144 YFSIITQALTFALMLAFNRNEMAMGGSTGLTRFDELLGFALAGEGMTVALFVASGVAVLL 203

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +      + R+ +       RD +     +   +   KL+ F +S+   G+AGA +    
Sbjct: 204 AFWGCKAVTRSRLGRVCMATRDAEARVRFIGYRVEHVKLAVFVLSAMIAGVAGALYVPQV 263

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             I+P  F    +I V+  V LGG  +L        ++  +  +  G+            
Sbjct: 264 GIINPSTFAPLFSIEVVVWVALGGRATLYGALLGALVVNYLKTVLTGV------------ 311

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                    L+     +V +     +  L
Sbjct: 312 --MPDAWLFLLGGLFVVVTMFLPQGVAGL 338


>gi|163849166|ref|YP_001637210.1| inner-membrane translocator [Chloroflexus aurantiacus J-10-fl]
 gi|222527143|ref|YP_002571614.1| inner-membrane translocator [Chloroflexus sp. Y-400-fl]
 gi|163670455|gb|ABY36821.1| inner-membrane translocator [Chloroflexus aurantiacus J-10-fl]
 gi|222451022|gb|ACM55288.1| inner-membrane translocator [Chloroflexus sp. Y-400-fl]
          Length = 347

 Score = 82.6 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 66/331 (19%), Positives = 117/331 (35%), Gaps = 31/331 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +       LL      +   K+   M IQ+ I  +FA    I++G  G+LS    + + 
Sbjct: 19  LIAFPYLIALLTGQPIDSGIPKFWQGMLIQVFILAVFAMSYDILMGYTGILSFGHALFFG 78

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            GAY+  IL    G  +        +I+    +I+GL SL+  G Y A+ TL  +++F  
Sbjct: 79  TGAYTIGILLKHAGWDLGSAFVAVIVIAVLQSLIVGLLSLRVSGVYFAMVTLAFAQMFFL 138

Query: 136 IL--IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           +     ++  T  + G+       +                S     +  YY+ LG   +
Sbjct: 139 LAEATDFRQWTGAEDGLQSIPVPAW---------------ISPTNERLRFYYLALGFAVV 183

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              +   +  +        IRDN+     L    +  KL A  +S     +AGAF A   
Sbjct: 184 MYLLARQVVNSPTGRVMMAIRDNEVRARVLGYHTLTYKLIAITISGVMAALAGAFNALWN 243

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
              +P +      I  + + I+GG+ SL       A++  +                   
Sbjct: 244 LNANPAVLSVGTTINALLMTIIGGVGSLIGPMLGAAVIQLLGYWLNFF------------ 291

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             F      L  I   L++L   + ++    
Sbjct: 292 --FGPAWPLLFGIVYILIVLFLPYGIVGTWR 320


>gi|126696222|ref|YP_001091108.1| putative membrane protein of urea ABC transport system
           [Prochlorococcus marinus str. MIT 9301]
 gi|126543265|gb|ABO17507.1| putative membrane protein of urea ABC transport system
           [Prochlorococcus marinus str. MIT 9301]
          Length = 376

 Score = 82.6 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 45/343 (13%), Positives = 99/343 (28%), Gaps = 31/343 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +L+    LL  +    T    +  ++  + L   + A G+ ++ G  GLLSL   I +A
Sbjct: 12  IVLSFWIILLALIIAAPTLLPVFRLNLLGRYLSLSIVALGVDLIWGYTGLLSLGQGIFFA 71

Query: 76  IGAYSYVIL-----------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           +G Y   +                         +                I  +P+L   
Sbjct: 72  LGGYCAAMFLQITSSSEFPNNIPEFFALYGVEKLPFFWEPFKSPIFTFFAIWIIPALVAG 131

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
                +    +  ++ +IL +   +            +         + + F        
Sbjct: 132 LIGFLVFRNRIKGVYFSILTQASLLVFFNFFNGQQKLINGTNGLKTDVTQLFGQMVGSES 191

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
            +   +++   +   +     W+ R    N    IRD++          +  K   F+++
Sbjct: 192 MQRIFFWITAILVIAAWFFAKWVVRGRFGNILIGIRDDEPRVRFTGYNPVIFKTIVFSIA 251

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
               G++GA +      +SP       +I ++  V +GG  +L         +     L 
Sbjct: 252 GGLAGISGALYTVQSGIVSPQFMTVPFSIEMVIWVAVGGRGTLLGAILGAVFINYAKSLV 311

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                           +       +      LV+      +L 
Sbjct: 312 SE--------------ALPASWMFIQGGLFILVVTALPEGVLG 340


>gi|124268773|ref|YP_001022777.1| branched-chain amino acid ABC transporter permease [Methylibium
           petroleiphilum PM1]
 gi|124261548|gb|ABM96542.1| branched-chain amino acid ABC transporter, permease protein
           [Methylibium petroleiphilum PM1]
          Length = 404

 Score = 82.6 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 50/341 (14%), Positives = 99/341 (29%), Gaps = 48/341 (14%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL----------- 84
             +  ++  + L Y   A GL +V G  G+LSL   + + +G Y+  +            
Sbjct: 32  DIFRLNLVGKYLTYAFVAVGLVMVWGYGGVLSLGQGVFFGLGGYAMAMFLKLEASDPETT 91

Query: 85  ---------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                                 +WL      +       +  L +              +
Sbjct: 92  KIQTTPGIPDFMDWNQITELPMMWLPFKSLPLSLILVIAVPTLLAWIISFAMFKRRVGGV 151

Query: 130 SEIF--QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                 Q + +    +  G+ G             +  L     + +     +  +YY+ 
Sbjct: 152 YFAIITQAVALILTVLIIGQQGY------TGGVNGMTDLKTVLGWDTRTDSAKYILYYLC 205

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +   S  +  W++ + +      +RD +         +   K+  F +++A  G+ GA
Sbjct: 206 VALLVASILLCRWIQTSKLGTLLLAMRDKEDRVRFSGYDVSNFKIFTFCLAAALSGIGGA 265

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            F+     +SP       +I ++    +GG  SL      T ++                
Sbjct: 266 LFSLQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLVGAVYGTLLVNAGKTF---------- 315

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
               F  SF      LM      V L     L  L      
Sbjct: 316 ----FSESFPDLWLFLMAALFIGVTLAFPMGLAGLWESHVK 352


>gi|238749865|ref|ZP_04611369.1| Branched-chain amino acid transport system, permease component
           [Yersinia rohdei ATCC 43380]
 gi|238711794|gb|EEQ04008.1| Branched-chain amino acid transport system, permease component
           [Yersinia rohdei ATCC 43380]
          Length = 514

 Score = 82.6 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 80/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++ +         + +  +I+      +       
Sbjct: 241 ITYGLLGVINMAHGEMLMLGAYSAYLVQTLLQHVAPHWLALYPLIALPVAFFITAGIGMI 300

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      L     + +         +
Sbjct: 301 LER--TVIRYLYGRPLETLLATWGISLMLIQSVRMIFGAQNLEVANPAWLSGGIQILPNL 358

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+  +  +     L L +T +    R +  N+              + AF +
Sbjct: 359 VLPWNRIAVIAFVVIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGRVDMLAFGL 418

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+             I    +V+LGG+  L+    A   L  + ++
Sbjct: 419 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 476

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 477 LEPQMGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 511


>gi|284990185|ref|YP_003408739.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160]
 gi|284063430|gb|ADB74368.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160]
          Length = 291

 Score = 82.6 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 64/308 (20%), Positives = 109/308 (35%), Gaps = 26/308 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY +FA G ++V G L  L+L     +A  A+  + L  R GLS+W  +PV
Sbjct: 4   LLNGIFIGSIYALFAIGFTLVFGILDRLNLAHPAVFAASAFVGIELVERGGLSLWAALPV 63

Query: 99  SAMISGACGMIMGLPSLKFRGDY--LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +     G+++   + +          A LI S     +LI       G          
Sbjct: 64  VFVFGAVLGLVIERLAFRPLKGRADAHFAGLISSIALAGMLIALLQWRYGPDTRRFPP-- 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                         RF  +     +    +L     L   +   + RT +    R + +N
Sbjct: 122 --------GSFPETRFDVAGAQVTLAQVVILAVSLALMVGLTYMVTRTRLGRGMRAVAEN 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             A   L   +       FA+SSA   +AG  FA + +     M   +  +  ++++I+G
Sbjct: 174 PTAARVLGVDVDRITAVTFAISSALGAVAGVLFAINVNTAQLGM-GSAIELKGLAVIIVG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM SL        +L              +  ++ F               LFL++L+R 
Sbjct: 233 GMGSLPGALIGGLVLGLAEVFAVQYIGSSWRDVIAFG-------------LLFLILLVRP 279

Query: 337 HSLLRLRT 344
             LL  R 
Sbjct: 280 QGLLGARK 287


>gi|121611723|ref|YP_999530.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121556363|gb|ABM60512.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 337

 Score = 82.6 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 51/290 (17%), Positives = 111/290 (38%), Gaps = 11/290 (3%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-SRYG 89
                  +   M  +++I  +FA  L ++ G  GL+SL     + +  Y+      S   
Sbjct: 29  FPLVGSDFYLQMVTRMMIMAIFAMSLDLLQGVTGLVSLGHAAFFGVAGYALAWFTPSDMP 88

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +S+W  +P++   +G   +++G   ++ RG Y  + T+  +++   +    + +      
Sbjct: 89  VSLWWSLPLAIAAAGLLALLIGCFVVRTRGIYFIMVTMAFAQMLFYLFFDNRLLGGSDG- 147

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                    L    R       +    +      YY  L +      ++  L  +    A
Sbjct: 148 ---------LFIQFRPDASILGWLPFDLEVRTTFYYFTLTLQVAVYVLLRRLLWSPFGRA 198

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              IR N +   +L       +L+AF ++ A  G+AG    A    ++P+M  F  +   
Sbjct: 199 LAGIRINGQRMRALGFGTHGYQLAAFTLAGALAGLAGYLLGAQTGHVTPEMMGFHMSAHA 258

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           + ++ILGGM + +           ++ L   ++  ++ SL+       + 
Sbjct: 259 LMMLILGGMGNFAGAMIGAFAFEYLLHLFQDLSNKHWQSLMGGFIVLVVL 308


>gi|317486437|ref|ZP_07945264.1| branched-chain amino acid transport system/permease component
           [Bilophila wadsworthia 3_1_6]
 gi|316922347|gb|EFV43606.1| branched-chain amino acid transport system/permease component
           [Bilophila wadsworthia 3_1_6]
          Length = 302

 Score = 82.6 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 94/299 (31%), Gaps = 17/299 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
             +  IY + A G ++V G + L++      Y IGA++ +I+ S  G+  +    +  + 
Sbjct: 14  LTRGSIYALIALGYTMVYGIIELINFAHGEIYMIGAFTALIVASALGIMGFPAAGIIVIA 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           + A  +                          + LI    ++          +       
Sbjct: 74  ALAAVIWCAAYGYTIEKIAYRPLRGA---PRLSPLISAIGVSIFLQNYVSLAQTSDFVAF 130

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
            + +  F        I     + +++       ++ L+++ T +  A R    N+K    
Sbjct: 131 PQLITDFEFLDPISHIIGTSDFLIIVTSLVTMVALTLFIQYTKMGKAMRATAQNRKMAML 190

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L           F + S+   + G   A    +++     F   I   +  +LGG+ S+ 
Sbjct: 191 LGIDADRIISLTFIIGSSLAAIGGVLIANHVGQVNFF-IGFIAGIKAFTAAVLGGIGSIP 249

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  +L        G     +   L F               L L+++ R   +L 
Sbjct: 250 GAMVGGLVLGLCESFATGYISSAYEDALAF-------------ALLVLILIFRPAGILG 295


>gi|170736642|ref|YP_001777902.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
 gi|169818830|gb|ACA93412.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
          Length = 331

 Score = 82.6 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 101/292 (34%), Gaps = 12/292 (4%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
           + +++   +       Y  ++    L+  + A    ++ G  G+L+L     + IGAY +
Sbjct: 4   FAIVVVGAILPLVVGAYQLTVIRDALVLAILALSYDLLWGRAGVLTLGHTTFFGIGAYGF 63

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMI--MGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
            +   ++G +           +     +    L     R  + AI ++ +  I Q +   
Sbjct: 64  AVTTVQFGQTPLFGFLAGLACAAVAAAVLGYFLLYAGVRLHFFAILSMAVLIIAQQLATS 123

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W+ +T G  G+     L F                  +   +  +Y +  +      ++ 
Sbjct: 124 WQSVTGGDTGLLGIPGLSFQLAGHT----------LDLSSPVASWYAVAIILVGLLGVVW 173

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L R+        I  N+    +      +  L  F  S+    +AG   AA+   ++PD
Sbjct: 174 LLCRSRYGKVLAAISTNEWRALACGYHTSWHLLLMFMASAVLAAVAGCLMAATAGVVAPD 233

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           +F       VI  V +GG  S      A   L  +      ++  ++  +L 
Sbjct: 234 VFSPVLATEVILWVAIGGRGSSGGPVLAAVGLTLLKHGASSLSTQWWPLILG 285


>gi|331012527|gb|EGH92583.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 542

 Score = 82.2 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 269 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 328

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 329 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 386

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 387 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 446

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 447 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 504

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 505 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 539


>gi|293397104|ref|ZP_06641378.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Serratia odorifera DSM
           4582]
 gi|291420575|gb|EFE93830.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Serratia odorifera DSM
           4582]
          Length = 485

 Score = 82.2 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 83/288 (28%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY+  ++   +       + +  +++      +       
Sbjct: 212 ITYGLLGVINMAHGEMLMLGAYAAYLVQGLFQQFAPQWLALYPLVALPVAFAVTAAIGMA 271

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      +     + +         +
Sbjct: 272 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRMLFGTQNVEVANPAWLSGGIALLPNL 329

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V++ +  +     L L +T +    R +  N+              + AF +
Sbjct: 330 VLPWNRIAVMVFVALVLVFTWLLLNKTRLGMNVRAVTQNRAMAACCGVPTGRVDMLAFGL 389

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+LGG+  L+    A   L  V ++
Sbjct: 390 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGTVVAALGLGIVNKI 447

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                    L++  + L I  R   L   +  
Sbjct: 448 LEPQLGAVLGK-------------ILILALIVLFIQKRPQGLFAFKGR 482


>gi|114764861|ref|ZP_01444043.1| ABC transporter permease protein [Pelagibaca bermudensis HTCC2601]
 gi|114542747|gb|EAU45770.1| ABC transporter permease protein [Roseovarius sp. HTCC2601]
          Length = 326

 Score = 82.2 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 54/281 (19%), Positives = 104/281 (37%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           ++         + +  ++  + +I+ + A GL+I +G  GL+SL   + + IG Y+  IL
Sbjct: 16  IVIPGWALYADEPFTITLATRAVIFALAAVGLNIALGLGGLVSLGHAVFFGIGGYAMGIL 75

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            S       L+     +       ++ L ++        +  L+         I      
Sbjct: 76  ASHAQSYTPLIEWPFVIEGTKSMPVIWLVAIVASSAAALLIGLLSLRTSGVYFIMITLAF 135

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                 +      + G    S+     FP    +  I  Y + L +  L  +    L R+
Sbjct: 136 GQMMYFFAISWPAYGGEDGLSIYVRNGFPGLNTLVPIQFYGLCLALLCLVLAFNARLMRS 195

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
               A    R   +   ++       +L A  +S A  G+AGA FA     +SP M  + 
Sbjct: 196 PFGLALDAARQVPERVRAVGLDPRRLQLVALVISGAITGLAGALFADLNRFVSPTMLSWQ 255

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
            +  ++  VI+GG+  L        I + +  L  G++ Y+
Sbjct: 256 MSGEIMVFVIIGGVARLFGPVAGAGIYVLLEHLLGGVSEYW 296


>gi|288917288|ref|ZP_06411656.1| ABC transporter related protein [Frankia sp. EUN1f]
 gi|288351310|gb|EFC85519.1| ABC transporter related protein [Frankia sp. EUN1f]
          Length = 967

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 12/243 (4%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             +           +I  +    L +V G  G LSL        G Y    L + +GL  
Sbjct: 316 LSTPDNWTDAFTTTIIGAIVCVSLVVVTGYGGQLSLAQFAFAGWGGYVASRLAAEHGLPF 375

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            L++ +  + +   G+++GLP+L+ RG +LAIAT  ++   Q +L +  P+T G  G  V
Sbjct: 376 LLVLVIGVVAAVPLGVLVGLPALRTRGIHLAIATFGLAYSLQAVLFQSVPLTGGLEGTVV 435

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                            F +    V +      V L    L+A +   +RR         
Sbjct: 436 EP------------ASLFGWDVDPVSHPKRYAIVCLTALLLAAVVAGNIRRGRAGRRLVA 483

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +R N++A  SL  ++  AKL +FA+S+A  G+ G   A     +  + F    +I V+  
Sbjct: 484 VRGNERAAASLGISVYGAKLVSFALSAAIAGLGGVLLAFQSSYVDFNQFNVFNSIAVVIN 543

Query: 273 VIL 275
            ++
Sbjct: 544 TVI 546



 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 81/272 (29%), Gaps = 12/272 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           ++         IY +   GL +V    G+++       A+GA ++  L    G+     +
Sbjct: 3   RFALLGLGLGAIYALAGQGLLLVYRGSGVVNFAQGAFAAVGALAFYQLHMEAGVPTAPAV 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++  ISGA G +M L  ++   D   +  +I +     +L +   I  G     V   L
Sbjct: 63  VLALAISGAVGALMHLAVMRPLRDAPPLTRVIATLGVMVVLQQAGRIIFGTEVHIVPSFL 122

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                           P            +L     +SA + L  R +        + +N
Sbjct: 123 PTDSVH----------PFGGPAVGADRLVLLAIAVVISAVLWLVYRYSRFGAVTAAVAEN 172

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++A      +     +  + + +   G AG                    I  ++  ++ 
Sbjct: 173 ERAAQLTGHSPDVVAVINWTLGAMLAGAAGILIVPITGL--DINTLILLIIPALATCVVA 230

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              S      A+ ++                 
Sbjct: 231 VFASFPIAFAASMVIGITQSEITNYVSAAGWG 262


>gi|242280407|ref|YP_002992536.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638]
 gi|242123301|gb|ACS80997.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638]
          Length = 358

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 68/358 (18%), Positives = 132/358 (36%), Gaps = 38/358 (10%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +       ++           YI S+ + I I ++ +  L++V G +G  S        I
Sbjct: 8   IGIWAMAAIVVALSQFGALDLYIQSVIMFIGINIILSSSLNVVNGYMGEFSCGHAGFMCI 67

Query: 77  GAYSYVILGSRYGLS-----------------IWLLIPVSAMISGACGMIMGLPSLKFRG 119
           GAY   +L   +                      +++ +S ++S   G+I+ +PS K RG
Sbjct: 68  GAYVSSVLSVMFFAQDKIFGAPILPPELAPLGFPIVVIISGLVSAVAGLIVAVPSFKTRG 127

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           DYLAI T+  + +  + +     I  G  G     R+      V  +             
Sbjct: 128 DYLAIITIAANYMVISAIENM-DIIGGPRGFMGMKRVVNAMEDVIDIPWMM--------- 177

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
                  ++   F+S  +I     +       +I  ++ A   ++      K++AF +SS
Sbjct: 178 -----IWVILGTFMSIWMIRRFVSSTYGKGIMSICQDEVAAEIMSVDTNKMKMAAFMLSS 232

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
              G+AGA FA     ++P  F   ++   + +V LGGM SL     +      ++EL  
Sbjct: 233 GLAGVAGALFAHVLGYVNPQSFNIMKSTECLVMVYLGGMGSLGGSILSAIFFTVMLELLR 292

Query: 300 GMNFYYFNSLLKFDCSFNMRHT------TLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            +       +   +   +  H        L+ + L L++  R   ++  +   +   R
Sbjct: 293 FIIPALDTGMHFLNLLPDTYHLSQVWKWVLIPLTLILLMQFRPEGIMGNKELPDLFPR 350


>gi|121608835|ref|YP_996642.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121553475|gb|ABM57624.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 308

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 94/293 (32%), Gaps = 8/293 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI----LGSRYGLSIWL 94
           + +      IY + A G ++V G +G+++      Y IGAY  ++    +G++ G  + L
Sbjct: 12  LVNGLTLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGTQGGYPLPL 71

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
           ++  +  +S       G    +     L     ++  I    +  +         I    
Sbjct: 72  VLGAALFVSVLVTGTYGFVVERVAYRPLRGGPRLVPLISAIGMSIFLQNY---MQIGQGA 128

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
           R   +   V   + F       V        ++     L  ++ L++  + +  A R   
Sbjct: 129 RDVSVPLLVSGALEFDMGGDFTVTVPYGRLLIVGVTLALMIALTLFIAHSRMGRACRACA 188

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           ++ +    L           F + +    + G     S  +++     F   I   +  +
Sbjct: 189 EDMQMANLLGIDTNKVISFTFVLGAMLAAVGGVLIGLSIGKLN-PFIGFIAGIKAFTAAV 247

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           LGG+ S+        +L        G     +  ++ F     +       + 
Sbjct: 248 LGGIGSIPGAMLGGVLLGLAETFASGYMPGEYKDVVAFGLLILVLLLRPTGLL 300


>gi|291615146|ref|YP_003525303.1| inner-membrane translocator [Sideroxydans lithotrophicus ES-1]
 gi|291585258|gb|ADE12916.1| inner-membrane translocator [Sideroxydans lithotrophicus ES-1]
          Length = 320

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 92/305 (30%), Gaps = 10/305 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +Q  +Y + A G ++V G LGL++        IGA    ++      S+      
Sbjct: 21  IINGLVQGSVYALVALGYTMVYGILGLINFAHGEVVMIGA----MIALTVLQSLLATAVA 76

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +      +      +        +A   +    +   +      +             
Sbjct: 77  PVLAVLVSLLAAMAVCMALGYTIERVAYRPLRNAPRLAPLITAIGVSIVLQNLAMMIWGR 136

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +               I       +++    + A ++  + +T +  A R + +N  
Sbjct: 137 EYHSFPLPFDNASHQLGGAIVNDVQIGIVVIALVIMAGLMWLVHQTRMGRAMRAVAENPA 196

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   I       F + SA   +AG   +A+   +   M  F   +   +  +LGG+
Sbjct: 197 AATLMGVDINSVISFTFMLGSALAAIAGFMVSANYGIVHYYM-GFMLGLKAFTAAVLGGI 255

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L  +  L  G         L      +          L  V++ R   
Sbjct: 256 GNLRGAMVGGVLLGLIESLGAGYIGDLTGGFLG-----SNYQDVFAFFVLIAVLIFRPSG 310

Query: 339 LLRLR 343
           LL  +
Sbjct: 311 LLGEK 315


>gi|254503754|ref|ZP_05115905.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222439825|gb|EEE46504.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 327

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 102/303 (33%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
                    + +  ++  + +I  + A GL I +G  GL+SL   + + IG Y+  IL  
Sbjct: 18  VPLWAHYSGEPFTVTLATRAVILALAAVGLHIALGLGGLVSLGHAVFFGIGGYAMGILAH 77

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
                  L+     +       ++ L ++           L+         I        
Sbjct: 78  HAQTYTPLMEWPFVVEGTKSMPVIWLVAVVLSSVVAYFIGLLSLRTSGVYFIMITLAFGQ 137

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
               +      + G    S+     FP    +  I  Y V   +          L+R+  
Sbjct: 138 MFFFFAISWSAYGGEDGLSIYVRNGFPGVNTLVPIQFYAVCFVILAAVMFFAARLQRSPF 197

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A    R       ++    +  +L AF +S A  G+AGA FA     +SP MF +  +
Sbjct: 198 GLALNAARQVPDRVETVGLNPMRLRLVAFVLSGAITGLAGALFADLNRFVSPTMFSWQMS 257

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             +I  +ILGG+  L        + + +  +   ++ Y+   L        +     ++ 
Sbjct: 258 GELIIFIILGGLGRLYGPVVGAVVFVALEHILGDLSDYWHIYLGVLLLGVVLFARGGIIG 317

Query: 327 ALF 329
            L 
Sbjct: 318 MLL 320


>gi|330953090|gb|EGH53350.1| inner-membrane translocator [Pseudomonas syringae Cit 7]
          Length = 529

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 315

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 491

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526


>gi|317401363|gb|EFV81999.1| branched-chain amino acid transport system permease [Achromobacter
           xylosoxidans C54]
          Length = 354

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 81/343 (23%), Positives = 141/343 (41%), Gaps = 23/343 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +R ++      +   +   + F+ + A  S   + ++ I  LI  + A GL+I+VG
Sbjct: 18  QIFPIRQDR------VFIWLLLAVAFIAIPALSSDYLLRAILIPFLILSLAAVGLNILVG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGD 120
             G +SL      A+GAY+    G R+     ++ I +    +   G+I G+PSL+ RG 
Sbjct: 72  YCGQISLGTGAFMAVGAYAAWNFGVRFPGMPLIVQILLGGCFATIVGVIFGIPSLRIRGL 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL          ++    TN  +   V+                       V   
Sbjct: 132 YLAVATLAAQFFVDWAFLRIPFFTNYSSSGNVSVPPLTAF-------------GLPVQSA 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y  +L +  + + +   L R AI   W  IRD   A   +    ++AKL+AFAVSS 
Sbjct: 179 LEKYLFVLILVVVFSLLAKNLVRGAIGRQWMAIRDMDVAASVIGIRPMYAKLTAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            +G+AGA +         P  F  + +  ++ +VI+GG+ S+       A ++ V     
Sbjct: 239 IVGVAGALWGYIHLGSWEPLAFDLTRSFQLLFMVIIGGLGSIIGSFFGAAFIVLVPVALT 298

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +   +   L     +       +    +   ++   H L RL
Sbjct: 299 NV--PHMLGLSLSVDTAAHVEHMVFGALIVFFLIAEPHGLARL 339


>gi|134093664|ref|YP_001098739.1| putative ABC transporter permease [Herminiimonas arsenicoxydans]
 gi|133737567|emb|CAL60610.1| putative ABC-type branched-chain amino acid transport system,
           permease component [Herminiimonas arsenicoxydans]
          Length = 343

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 49/325 (15%), Positives = 112/325 (34%), Gaps = 24/325 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA-YAI 76
           L     ++  L +      +Y  ++ I    Y +   G +++ G  GLLS    +     
Sbjct: 30  LIAGGLVIAALVIAPLIVSQYYMTLLIPFFAYAVILLGFNLLFGYGGLLSFGHALFIAIG 89

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
              +  ++     +S  L++  + + S    + +   + +F G +  + TL    +F + 
Sbjct: 90  AYAAAALVSKTGMVSFELMLLTAIVASTIISIPIAWLASRFTGIFFGMLTLSFGMLFHSF 149

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           L K+  IT G +G+ V     F     +                   YY  L M  L   
Sbjct: 150 LNKFYYITGGDSGMRVPRPTLFGMELDQFDKT--------AFLGGPFYYYCLVMILLLTL 201

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++  + R+         RDN      L   I   +  AF +S+ +  + G     +    
Sbjct: 202 VMWRIVRSPYGIHLMASRDNAVKALYLGVKIRSVRAIAFVISAVYASIGGVILGVNTGLA 261

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
            P++  ++ +  ++ + +LGG            + I + +    +  Y+           
Sbjct: 262 DPELAYWTHSGHLVFMAVLGGYQEFLGPVLGAFVFILLQDELSSLTQYW----------- 310

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                  +   L +++++    ++ 
Sbjct: 311 ----RFFLGAILAILVVVLPGGIMG 331


>gi|269954917|ref|YP_003324706.1| inner-membrane translocator [Xylanimonas cellulosilytica DSM 15894]
 gi|269303598|gb|ACZ29148.1| inner-membrane translocator [Xylanimonas cellulosilytica DSM 15894]
          Length = 328

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 58/313 (18%), Positives = 114/313 (36%), Gaps = 9/313 (2%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           +      + + A GL++  G  GLL++       +GAY + I          L + V+  
Sbjct: 16  IAPTTAAFALAAIGLNLHFGYTGLLNMGQAGFMLLGAYGFGIATIAG-APFLLALLVAIG 74

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-----LIKWKPITNGKAGIYVADRL 156
                 +I+G+P+LK RGDYLAI T+  +EI + +       +W    +G  G    +  
Sbjct: 75  AGIVFALILGIPTLKLRGDYLAIVTISAAEIVRWLGRSTVFQEWTGGASGLLGKTYKESF 134

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMY-YVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
             L                    + +       G+  L+   +  + R+      + IR+
Sbjct: 135 QALSFLPEGRTAIGPLEYINNGSDSWWTRLFAWGLVLLAVLFVWLVTRSPWGRVLKGIRE 194

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  +L   +   K+ A  +  A   + G  +      I+PD    +      ++++L
Sbjct: 195 DEDAVRALGKNVYAMKMQALVLGGALGALGGVLYVLP-SAITPDAMGRTMTFFTWTVLLL 253

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  +L      + +   V              +L            L+ + L L+++ R
Sbjct: 254 GGAATLFGPVLGSMLFFFVYMALRTGMRTGLGDVLG-STKVEQIGGILVGVTLMLLVIFR 312

Query: 336 SHSLLRLRTPSNF 348
              +L  +    F
Sbjct: 313 PQGILGNKKELAF 325


>gi|24380046|ref|NP_722001.1| putative branched chain amino acid ABC transporter, permease
           protein [Streptococcus mutans UA159]
 gi|290579975|ref|YP_003484367.1| putative branched chain amino acid ABC transporter permease
           [Streptococcus mutans NN2025]
 gi|24378037|gb|AAN59307.1|AE014996_10 putative branched chain amino acid ABC transporter, permease
           protein [Streptococcus mutans UA159]
 gi|254996874|dbj|BAH87475.1| putative branched chain amino acid ABC transporter permease protein
           [Streptococcus mutans NN2025]
          Length = 289

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 104/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L ++Y ++ ++ + +
Sbjct: 5   LINGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLITKYHMNFFVALVL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++   G+++   + +   +   IA LI +      L        G         L  
Sbjct: 65  TMVLTAILGVVIEFLAYRPLRNSTRIAALITAIGVSFFLEYSMVRLVGANKHAFPQTLAT 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +            +    V        +L    FL  ++   +++T +  A R +  +  
Sbjct: 125 VK-----------YNLGPVSVTNVQLIILGVSIFLMLALQFIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G  G       + + P M      I      +LGG+
Sbjct: 174 AAQLMGINVNSTISFTFALGSALAGAGGVLIGLYYNSVDPLM-GMVPGIKAFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                            ++   L +++L+R   
Sbjct: 233 GIIPGAAVGGFMIGLLET-------------FSVSIGLASYKDAVVYAVLIIILLVRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|238784255|ref|ZP_04628267.1| Branched-chain amino acid transport system, permease component
           [Yersinia bercovieri ATCC 43970]
 gi|238714822|gb|EEQ06822.1| Branched-chain amino acid transport system, permease component
           [Yersinia bercovieri ATCC 43970]
          Length = 538

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 79/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY   ++ S +       + +  +++      +       
Sbjct: 265 ITYGLLGVINMAHGEMLMLGAYCAYLVQSLFQQFAPHWLALYPLVALPVAFFITAGIGMA 324

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      L     + +         +
Sbjct: 325 LER--TVIRHLYGRPLETLLATWGISLMLIQSVRMIFGAQNLEVANPAWLSGGLQILPNL 382

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+  +  +     L L +T +    R +  N+              + AF +
Sbjct: 383 VLPWNRIAVIAFVVVILLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGRVDMLAFGL 442

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+LGG+  L+    A   L  + ++
Sbjct: 443 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 500

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 501 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 535


>gi|327190268|gb|EGE57369.1| amino acid ABC transporter [Rhizobium etli CNPAF512]
          Length = 347

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 67/328 (20%), Positives = 128/328 (39%), Gaps = 16/328 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  V      +L +    S    +++ +  L   +   GL+++ G  G +SL      A+
Sbjct: 18  LAPVAIVAGAYLVVPFIGSTYLFEAILLPFLALSLAGVGLNLLTGYAGQVSLGSAAFMAV 77

Query: 77  GAYSYVILGSRYGLSI-WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GA++      R       + I ++ + +   G++ GLPSL+ +G YLA++TL      Q 
Sbjct: 78  GAFAAYNFNLRVDGLPLIVSILLAGLSAAVIGIVFGLPSLRLKGFYLAVSTLAAQFFVQW 137

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L K+   +N  A   +                            +  Y   L +  +  
Sbjct: 138 ALTKFSWFSNDSASGVIDAPALT-------------LAGLEFTGPVGRYLFSLTVVVMLT 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254
            +   L  +     +  +RDN+ A   +   ++  KL AFA+SS  I +AGA +A A   
Sbjct: 185 FLAHRLTTSQTGRNFIAVRDNETAARIIGVPVLKTKLLAFAISSFIIAVAGALWAFAYLR 244

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            + P  F    +  ++ I+I+GG+ S        A+++    L   +  +    L     
Sbjct: 245 TVEPAGFNLDRSFQILFIIIIGGLASTRGAFLGAALIVVFPLLLSRLGSFLLGDLFDSGV 304

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
             +M    ++   + L +++    L  L
Sbjct: 305 -LDMSQRIVLGALIILFLILEPDGLSSL 331


>gi|332525000|ref|ZP_08401184.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2]
 gi|332108293|gb|EGJ09517.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2]
          Length = 352

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 98/357 (27%), Gaps = 33/357 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I     V    L      A     Y  S+  +IL Y + A  + ++ G  G+LSL   + 
Sbjct: 10  ITITTVVPLLNLAVPETSALHLSDYAVSLLGKILCYAICALAMDLIWGYTGILSLGHGLF 69

Query: 74  YAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           +A+G Y+  +                        W  +P     S +    M +  L   
Sbjct: 70  FALGGYAMGMYLMRQIGRDGQYRSTLPDFMVFLDWKELPWHWAFSDSFVFQMAMVVLVPG 129

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
              L           + +           A + +  R             F R     + 
Sbjct: 130 LLALVFGFFAFRSRIKGVYFSIITQALTFAAMLLFFRNETGFGGNNGFTDFKRILELPIA 189

Query: 179 YEIFMYYVLLG---MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  + +    +      +   +  +      + IRD +          +  KLS +
Sbjct: 190 TSGMRVALCVISGLVLIGFFVMARAIVTSKYGRVLQAIRDAESRVMFTGYNPLAYKLSIW 249

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            +S+   G+AGA +      I+P     + +I +     +GG  +L         + G  
Sbjct: 250 TLSAVMCGVAGALYVPQVGIINPGEMSPAASIEIAIWTAVGGRATLVGPIVGAFFVNGAK 309

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR-LRTPSNFLER 351
                           F  +F       +      V L     L+  L+       R
Sbjct: 310 SW--------------FTVAFPEFWLFFLGALFIAVTLFLPDGLVGLLKRRKKETRR 352


>gi|291297023|ref|YP_003508421.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
 gi|290471982|gb|ADD29401.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
          Length = 326

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 101/323 (31%), Gaps = 15/323 (4%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS------- 80
           +        + +    +   +Y M A G ++V G LGL++      + IGA         
Sbjct: 3   VADLFAILPQTLLEGLLLGFVYAMVALGYTMVYGVLGLINFAHSEVFMIGAVIGLEVFRF 62

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           +    S    + ++L+ V+ + +     IM +   +F    L         +     I  
Sbjct: 63  WGNPESPVIANPFVLLLVALIFAAVGSGIMAVLVERFAYRPLRKRGSKNILVPMITAIGV 122

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF--LSASII 198
             +      IY A R        R+     +         I +  +++ +    +   + 
Sbjct: 123 SFLLQDLTRIYAALRHNEFNMQYRTYDALNQTFELPFQTIIQVKGIIIIVVSILMLIGLT 182

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + RT +  A R +  + +    +           F +  +  G+AG  F      ++P
Sbjct: 183 YLVNRTKLGKAIRAVSQDMQTASLMGINPDVIISRTFLIGGSLGGVAGVLFGLLYTNVTP 242

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                   +   +  +LGG+ ++        IL  +  L      +  N           
Sbjct: 243 YS-GVLPGLKAFTSAVLGGIGNIPGAMVGGLILGQLETLSGTYLPFLTNGNFG-----TE 296

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
                  + L L++L R   +  
Sbjct: 297 YKDVFAFLTLVLLLLFRPQGIFG 319


>gi|194289898|ref|YP_002005805.1| ABC transporter [Cupriavidus taiwanensis LMG 19424]
 gi|193223733|emb|CAQ69740.1| putative ABC TRANSPORTER, membrane component [Cupriavidus
           taiwanensis LMG 19424]
          Length = 358

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/320 (15%), Positives = 114/320 (35%), Gaps = 11/320 (3%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY-- 88
                     +M  +I I+V+      +++G  G++S    + + IG Y   I  SR   
Sbjct: 30  PFAFPGARALNMAAKICIFVVLVASYDLLLGYTGIVSFAHTMFFGIGGYGVAIAMSRMEP 89

Query: 89  -GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
              ++      +  +S    +++GL SL+ R  + A+ TL ++  F  ++ +    T G+
Sbjct: 90  GWGALLAGTAGALAVSALLALLIGLFSLRVRAIFFAMITLAVATAFATLVSQLSEWTGGE 149

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
            G+            + S   +   P S    ++  YY++     +    +L +  +   
Sbjct: 150 DGLTFKVPEVLRPGFMLSDAEWLGVPLSG---KLLSYYLVFAGALVLFLALLRIVNSPFG 206

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-ISPDMFKFSEN 266
              + IR+N     ++    +  +  +  +S+ F  +AG   A             F   
Sbjct: 207 RVLQAIRENDFRAEAIGYRTVVYRTVSTVLSAMFATLAGVLMAVWLRYNGPDTSLSFEIM 266

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGM----NFYYFNSLLKFDCSFNMRHTT 322
           + ++ IV++GGM +L      T + +        +    +       L        R   
Sbjct: 267 VDILLIVVIGGMGTLYGAVIGTVLFLVAQTYLQDVMKLASDGTAALPLLSALLHPDRWLL 326

Query: 323 LMVIALFLVILMRSHSLLRL 342
            + +   L +      ++  
Sbjct: 327 WLGLLFVLSVYYFPQGVVGR 346


>gi|187929270|ref|YP_001899757.1| urea ABC transporter permease protein UrtC [Ralstonia pickettii
           12J]
 gi|187726160|gb|ACD27325.1| urea ABC transporter, permease protein UrtC [Ralstonia pickettii
           12J]
          Length = 388

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/348 (13%), Positives = 95/348 (27%), Gaps = 32/348 (9%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            ++  +      LL           Y  ++  +I+ Y + A  L +V G  G+LSL   +
Sbjct: 28  SLIVCIGAPVCALLVPEGSPLHLSAYALTLIGKIMCYALAALALDLVWGYCGILSLGHGV 87

Query: 73  AYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
            +A+G Y+  +                                          +++ L  
Sbjct: 88  FFALGGYAMGMYLMRSIGREGVYKSDLPDFMVFLDWKELPWFWHGTEHFAWAMLLVILVP 147

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
                 +   A     +     +I            +  +  +          R   FP 
Sbjct: 148 GVLAWLFGFFAFRSRVKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGFPI 207

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
           S +     ++        L+      +  +        IRD +          +  KL  
Sbjct: 208 SALPTRTVLFVATFVALVLAFIACRAIVTSKFGRVVTAIRDAEARVMFSGYNPLGYKLFV 267

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           +  S+   G+AGA +      I+P       +I +   V +GG  +L        ++ G 
Sbjct: 268 WTFSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAVWVAVGGRGTLIGPIIGAFLVNGA 327

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             L                         ++     LV L   + +L L
Sbjct: 328 KTLLTAW--------------VPEYWLFVLGAIFVLVTLYLPNGVLGL 361


>gi|291296911|ref|YP_003508309.1| ABC transporter-like protein [Meiothermus ruber DSM 1279]
 gi|290471870|gb|ADD29289.1| ABC transporter related protein [Meiothermus ruber DSM 1279]
          Length = 559

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 54/295 (18%), Positives = 112/295 (37%), Gaps = 21/295 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-GSRYGLSIWLL 95
            Y   +   +LI  M    + +V G  G++SL  +    +G +       +   +   L 
Sbjct: 24  NYWLFLLTSMLISSMVTLSVGLVSGMAGMISLGQLSFAGVGGWMVAYFNANNLPIPFVLQ 83

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + + A+++   G+++GLP+L+ RG +LA+ T        ++         G  G  V   
Sbjct: 84  VLIGALVAVPLGIVIGLPALRVRGVHLAVVTFGF-AAVADLFFTILNFPGGVMGKPVLRP 142

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                               F+ ++   Y+  L +  L    +  L R+ + +AW  ++ 
Sbjct: 143 -------------------DFLSHDRSYYWFCLFLFVLLVLGVNALYRSRLGSAWLAVKH 183

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++A  ++   +   KL AFA+S+   G++G   A     +S   F  + ++I+ +  I+
Sbjct: 184 SERAAAAMGLNVAATKLWAFAMSAFIAGLSGGLLAGQVGLLSATNFSPTASLILFASAIM 243

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            G    +    A  +   V E+   ++       L F             I    
Sbjct: 244 VGARYPAGAVLAGVMAWLVPEVLGRLHLSQNLGNLIFALGTIAALKAGGGIFEVA 298


>gi|254428836|ref|ZP_05042543.1| amino acid or sugar ABC transport system, permease protein,
           putative [Alcanivorax sp. DG881]
 gi|196195005|gb|EDX89964.1| amino acid or sugar ABC transport system, permease protein,
           putative [Alcanivorax sp. DG881]
          Length = 300

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 94/303 (31%), Gaps = 27/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A GL++V G L + +      Y +GAY   I    +G++ W+ + +
Sbjct: 21  VLNGLTLGSIYGLVALGLTLVYGILHVPNFAHGALYMVGAYVSYITMVDFGVNYWVAMLL 80

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+   A  ++          D   I   I +      L     +  G     +      
Sbjct: 81  AAVAVAALAVLCERLVFNPLRDAPPIHDKIAAIGIMLFLEALVQMQWGAEFRRMPTP--- 137

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                           + +        ++ G   L A + L+L++T   +    +  N++
Sbjct: 138 ---------YTEILDIAGMTIPAQRVLIIAGAFSLMAVLHLFLKKTMTGSTIVAMAQNRE 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
             F +        +  FA+S A   +    FA     +          +    I+ILGGM
Sbjct: 189 GAFLVGIDANRVAMMTFAISGALAAVGATLFAP--INLVYPAMGHLLIMKAFVIIILGGM 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+                               +    L +++ ++   
Sbjct: 247 GSIPGAIVGGLIIGFAEAFGGFYIS-------------TDYKDIIAFALLVVILSIKPTG 293

Query: 339 LLR 341
           L  
Sbjct: 294 LFS 296


>gi|300702490|ref|YP_003744090.1| branched-chain amino acid transporter permease, membrane component
           (livm) [Ralstonia solanacearum CFBP2957]
 gi|299070151|emb|CBJ41441.1| putative Branched-chain amino acid transport system permease,
           membrane component (livM) [Ralstonia solanacearum
           CFBP2957]
          Length = 330

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 54/300 (18%), Positives = 119/300 (39%), Gaps = 17/300 (5%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--YGLSIWLLIPVSAMIS 103
           +L +V+FA   ++++G  GLLS      +    Y    L +     ++  + +       
Sbjct: 35  VLCFVLFASAFNLLLGYTGLLSFGHAAFFGGAGYVAGYLMTNQSLHVTPEVGLLAGTAAG 94

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
              G+++GL +++ +G Y A+ TL ++++F    ++    T G+ G+    R        
Sbjct: 95  ALIGLVVGLLAIRRQGIYFAMITLALAQMFYFFCLQAP-FTGGEDGLQGVPR-------- 145

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                   F    +  ++ +YY +L +   +  +I+    +      + I++N+    SL
Sbjct: 146 -----GKLFGVLDLSSDLTLYYFVLVVVVAAFLVIVRTIHSPFGQILKAIKENEPRAISL 200

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
                  KL AF +S+A  G+AGA         +     ++ +  VI + ++GG+  LS 
Sbjct: 201 GYDTDRFKLLAFVLSAALSGLAGALKTVVLGFETLTDVHWAMSGSVILMTLVGGLGILSG 260

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCS-FNMRHTTLMVIALFLVILMRSHSLLRL 342
                A++I +      +  +          +      TT+      + +L     ++  
Sbjct: 261 PILGAALVIALENKLGDIGTFLAGVTGVDGFNVLGESVTTVTGAIFVICVLTFRRGIMGE 320


>gi|91789918|ref|YP_550870.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91699143|gb|ABE45972.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas sp. JS666]
          Length = 323

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/286 (17%), Positives = 110/286 (38%), Gaps = 14/286 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS      +   AY           +  L I    +
Sbjct: 31  FVMKLLCFALFACAFNLLLGFTGLLSFGHAAFFGSAAYVTGWFIKSQSWTPELGILAGTV 90

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +G  G+++G  +++ +G Y A+ TL ++++   + ++                      
Sbjct: 91  AAGLIGLVVGAVAIRRQGIYFAMITLAIAQMVFFVCLQA--------------PFTGGED 136

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R        +  +  MYY ++ +  L    I  +  +      + IR+N+    
Sbjct: 137 GLQGVPRGRLLGLLSLESDTTMYYFVVAVFVLCFLGISRIVHSPFGQVLKMIRENEPRAI 196

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   KL AF +SSA  G+AG+         +     +S +  VI + +LGG+ + 
Sbjct: 197 SLGYQVDRYKLLAFVLSSALAGLAGSLKTLVMGFATLSDVHWSMSGEVILMTLLGGVGTF 256

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
                   I+I +  L       +   ++       +      V+ 
Sbjct: 257 FGPVFGAGIVISLQNLLADKVGSWVTVIIGAIFVVCVLAFRKGVVG 302


>gi|27376176|ref|NP_767705.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27349315|dbj|BAC46330.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 314

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 58/328 (17%), Positives = 123/328 (37%), Gaps = 29/328 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                ++  L+L           +I ++  +I+I  + A  L++++G  G++S       
Sbjct: 9   AVTALMLAGLVLLPLYSQASGNVFILTLFTRIVILALAAASLNLIMGFGGMMSFGHAAYL 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IG Y+  +L      S ++  PV+   S    +++G  SL+ RG Y  + TL  +++  
Sbjct: 69  GIGGYAVGMLAQEGVGSGFIQFPVALAASAIYALVIGALSLRTRGVYFIMITLAFAQMAY 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +                          +    R        +   +  YY+ L      
Sbjct: 129 YVASGLARYGG--------------DDGLTVYKRSDFSGLINLGNRVQFYYLCLACLLGV 174

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +I  +  +      + +R N++   ++       +L  F +S    G+AGA  A + D
Sbjct: 175 LFLIWRIVNSRFGLVVQGLRSNEQRMQAIGFPAKRYQLVCFVISGMMCGLAGALLANNTD 234

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ISP +  ++ +  ++ +VILGGM +L        + + + E    +  Y+         
Sbjct: 235 FISPAVMYWTRSGDLMVMVILGGMGTLFGPVMGAVVFLLLEEFLSQITEYW--------- 285

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   +M   L L++L     ++ +
Sbjct: 286 ------ALIMGPLLLLIVLFGRGGIMGM 307


>gi|330989139|gb|EGH87242.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 542

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 269 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 328

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
            G    +   +     + +L  W         + +A     +       +         +
Sbjct: 329 LGR--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 386

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 387 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 446

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 447 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 504

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 505 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 539


>gi|149375497|ref|ZP_01893267.1| ABC-type branched-chain amino acid transport system [Marinobacter
           algicola DG893]
 gi|149360202|gb|EDM48656.1| ABC-type branched-chain amino acid transport system [Marinobacter
           algicola DG893]
          Length = 318

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 57/326 (17%), Positives = 114/326 (34%), Gaps = 26/326 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +   ++ ++        +   +       ILI  +F   L  +VG +GL++L   + Y +
Sbjct: 10  IFLAIFFVIALCIPLFLEDNSFFVGKATTILILAVFVMSLDFLVGRVGLVTLGHALFYGL 69

Query: 77  GAYSYVILGSRYG-LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           G Y +VI+   Y  ++ W+       IS    +++G+  L+  G Y  + TL +S++   
Sbjct: 70  GGYLFVIVTPEYEAVNFWIYAMYIMGISALVALVVGVVVLRTSGIYFIMITLAISQMAYY 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                                  L   ++     F      +      YY+ L    ++ 
Sbjct: 130 FFFDSLEFGG----------NDGLFIFMKPETSIFGLNFLNLDNPTHFYYLSLLAVLVTL 179

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             I  + R+         R N +   +L   I   +L ++ + S     AG  FA     
Sbjct: 180 LAIKIILRSRFGRIVEASRLNPERTEALGYNIFAFRLISYIIGSTLAAYAGLLFALQYGY 239

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P    +  +   + + ILGGM ++      T    G+      M+  +          
Sbjct: 240 VNPQFMTWEMSGTALVMSILGGMGTIYGAILGTITYEGLQYFFEHMSEDW---------- 289

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                   M  A+ L++L+    L  
Sbjct: 290 -----MLFMGGAIILMVLLLRKGLAG 310


>gi|316932530|ref|YP_004107512.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315600244|gb|ADU42779.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 330

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 58/322 (18%), Positives = 110/322 (34%), Gaps = 26/322 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             +L    L     Q Y+     ++LI  +FA    +V G  G++S    + +    Y  
Sbjct: 7   IAMLALFLLLPLVLQDYLTVFMTRVLILCLFALSFDLVWGYAGIMSFGQAVFFGGAGYGV 66

Query: 82  VILGSR-YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
            +LG      S+ L++P   +I  A  +++G   L  R     I   + +        + 
Sbjct: 67  ALLGRDLGISSMLLVVPAGVLIGFALALLIGGFLLLGRNPSSVIFVSLGTLTASYAFDRL 126

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
                   G      +                 S  +      YY+ L +     ++  +
Sbjct: 127 ARGWYYLGGQNGIPSIPQ-----------MTIGSYDLGEGAVFYYLALAILIAVYAVCRY 175

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L R+    A   +R+N++        +   K   F++  A  G+AG+ +A     + P+M
Sbjct: 176 LVRSQFGLALAGLRENEQRISFFGYKVQHLKAIIFSLGGAIAGLAGSLYAFHEGFVWPNM 235

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
                +  V+  V+ GG  +L      T ++  V                    S+    
Sbjct: 236 LGVVMSTQVVLYVLFGGSGTLIGAVIGTVVIEIVSFWLSN--------------SYQDIW 281

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
             ++   + LVIL R   L+ L
Sbjct: 282 PIILGALMLLVILFRPAGLISL 303


>gi|114568059|ref|YP_755213.1| high affinity branched-chain amino acid ABC transporter permease
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
 gi|114338994|gb|ABI69842.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 293

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 102/303 (33%), Gaps = 24/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++        +GAY      +  G +I+  +  
Sbjct: 8   LINGLSLGAIYALIALGYTMVYGIIMLINFAHGDIMMVGAYVGFFSIAVLGSNIFAALIF 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+++   + K   +   IA LI +      L  +             +  + 
Sbjct: 68  AMLSCAVLGVLIEKIAYKPLRNSSRIAALITAIGVSLFLEYFTLFLLTPQQRVFPEAAF- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                       ++    ++      ++ +    L  ++   ++RT    A R +  +++
Sbjct: 127 ---------PLHKYQIGGLLVSNKDIFIFVLAVILMIALQYIIKRTRTGKAMRAVSLDRE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +  ++       FA+ S+    AG       + I+P M      +      +LGG+
Sbjct: 178 AAILMGISVDRTISITFAIGSSLAAAAGVMIGIYYNTINPLM-GIIPGLKAFVAAVLGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        ++  +  +  G     +   + F               L L++L++   
Sbjct: 237 GIIPGAMVGGFLMGILETMVSGYGSTLYRDAVAFG-------------VLILILLVKPTG 283

Query: 339 LLR 341
           L  
Sbjct: 284 LFG 286


>gi|186685166|ref|YP_001868362.1| inner-membrane translocator [Nostoc punctiforme PCC 73102]
 gi|186467618|gb|ACC83419.1| inner-membrane translocator [Nostoc punctiforme PCC 73102]
          Length = 316

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/319 (15%), Positives = 105/319 (32%), Gaps = 31/319 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY--------------VIL 84
             +      IY +FA G ++V   LG+++L     + +GAY                   
Sbjct: 10  FLNGLSIGSIYAIFALGYTLVYSILGIINLAHGAIFTLGAYFTYALMGGNFGFNGLLANA 69

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                L   + + + + ++G  G++M   + +      +   L +       ++    I 
Sbjct: 70  ALPIKLPFAIALILGSTLAGLIGVVMERVAFQPLRRQGSDPLLTVVSSLGVAVVIVNLIQ 129

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                          G    S    F  P   +        +      + A I  ++ RT
Sbjct: 130 YLVGAESYTYPADTYGNLPPS--INFGTPEKEIPIRTVQIIIFAVSVAIVAIITYFINRT 187

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
               A + I ++      L        +  F +SS   G+AG   A+S   I+   F  +
Sbjct: 188 KYGKAMQAIAEDPTTASLLGINSDRFIILTFFISSFLAGLAGTLVASSV-SIAGPYFGIA 246

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
             +  +++++LGG+ S+        ++  V                     ++     + 
Sbjct: 247 FGLRGLAVIVLGGLGSIPGAVLGGLLIGLVEAFV--------------PTEYSGYKEAVA 292

Query: 325 VIALFLVILMRSHSLLRLR 343
              LF+++L+R   LL  R
Sbjct: 293 YGILFIMLLVRPQGLLGRR 311


>gi|84514517|ref|ZP_01001881.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Loktanella vestfoldensis SKA53]
 gi|84511568|gb|EAQ08021.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Loktanella vestfoldensis SKA53]
          Length = 652

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 94/320 (29%), Gaps = 24/320 (7%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRY 88
           +   +             I+ + A GL+I  G + ++++       +GAY+   +     
Sbjct: 353 VALFQFLSLSFDALSLASIFFLAAIGLAITFGVMRVINMAHGEFIMMGAYTGYVVQTVIP 412

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA-TLIMSEIFQNILIKWKPITNGK 147
             +  L + +    +      + +  L  R  Y     TL+ +      L +      G 
Sbjct: 413 DYTASLAVALPLAFAVTFLAGVVMERLVIRHLYTRPLETLLATFGISIALQQLAKNIFGT 472

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
               V              +      +  V        + +        ++  L RT + 
Sbjct: 473 QARPVTAP---------DWLAGAIQINDLVSVAAVRVGIFIMAALFLLLLLYILNRTRLG 523

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
              R +  N     S+        +  F + S   G+AG          S     +    
Sbjct: 524 LEVRAVTQNPGMAASMGINPDRINMLTFGLGSGIAGVAGVAIGLVAQVTSEMGANYIVQS 583

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            +  +V    + S+       A++  +              +  F+ +  +   T MV+ 
Sbjct: 584 FMTVVVGG--VGSVFGTLAGAALIGSLQ-----------KGIEWFNPANTLAAQTYMVLF 630

Query: 328 LFLVILMRSHSLLRLRTPSN 347
           + L I  R   ++ L+  + 
Sbjct: 631 IILFIQFRPKGIVALKGRAA 650


>gi|228978582|ref|ZP_04138956.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis Bt407]
 gi|228781132|gb|EEM29336.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis Bt407]
 gi|326939671|gb|AEA15567.1| branched chain amino acid ABC transporter permease [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 286

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 116/301 (38%), Gaps = 31/301 (10%)

Query: 54  WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIM 110
               +++G  G++S    + + IGAY   +L  R      +  + I  + +IS     I+
Sbjct: 1   MSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFLIGIVAAIIISAIVSYII 60

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
           GL SL+ +  + A+ TL +S++F  +  KW+ +T+G  G        F            
Sbjct: 61  GLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPDVFRDRF-------- 112

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                        YYV L    +   ++    +++I    + I  N++   +L   ++  
Sbjct: 113 -----------TFYYVTLICLLIIFVLLRLFTKSSIGKVLKAISQNEQRVEALGYKVLHY 161

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           K+ A  V+     ++G  F  +   ++  +F     +  + + ++GG+ +L      + I
Sbjct: 162 KIIASIVAGVVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGVGTLIGAIAGSGI 221

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           +  +      +   Y             R T ++ +   +V+L+    L+         +
Sbjct: 222 IESLKYYLSELATEY---------PIFERWTIILGLLYIIVLLVFPKGLVGTVKKLKSFK 272

Query: 351 R 351
           R
Sbjct: 273 R 273


>gi|123443087|ref|YP_001007061.1| branched chain amino acid ABC transporter permease [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122090048|emb|CAL12911.1| putative Branched-chain amino acid transport system, permease
           component [Yersinia enterocolitica subsp. enterocolitica
           8081]
          Length = 533

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 81/288 (28%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++ S +       + +  +++      +       
Sbjct: 260 ITYGLLGVINMAHGEMLMLGAYSAYLVQSLFQQLAPHWLALYPLVALPVAFFITAGIGMA 319

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W        G+ +      L     + +         +
Sbjct: 320 LER--TVIRHLYGRPLETLLATWGISLMLIQGVRMIFGAQNLEVANPAWLSGGVQLLPNL 377

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+  +  +     L L +T +    R +  N+              + AF +
Sbjct: 378 VLPWNRIAVIAFVVIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGKVDMLAFGL 437

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+LGG+  L+    A   L  + ++
Sbjct: 438 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 495

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 496 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 530


>gi|317125180|ref|YP_004099292.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Intrasporangium calvum DSM 43043]
 gi|315589268|gb|ADU48565.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Intrasporangium calvum DSM 43043]
          Length = 291

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 58/306 (18%), Positives = 108/306 (35%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY +FA G ++V G L  L+L     +A+ A+  + L +  GL++W+ +P+
Sbjct: 4   LLNGVFIGSIYALFAIGFTLVFGILDRLNLTHPAVFAVSAFVGIELVADAGLTVWVALPI 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++    G+++   + +   +                LI    +      +        
Sbjct: 64  VLVLGAVLGLVIERVAFRPLKNRPDAHFAG--------LISSIALAGMFIALLQWRYGPD 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V   +    +LL    L   +   + R+ +    R I +N  
Sbjct: 116 TRRFPAGSFPETPIEFGGVAVTVLQVAILLISVVLMIGLTWLVARSRLGRGMRAIAENPT 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +       FA+SSA  G+AGA FA + +     M   +  +  ++++I+GGM
Sbjct: 176 AAKVLGINVDRVTSVTFAISSALGGVAGALFAMNVNSAQLGM-GAAIELKGLAVIIVGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL         L              +  L+ F               LFL++L+R   
Sbjct: 235 GSLPGALIGGLALGLAEVFAVQYIGSSWRDLIAFG-------------LLFLILLVRPQG 281

Query: 339 LLRLRT 344
           L   R 
Sbjct: 282 LFGARK 287


>gi|299131696|ref|ZP_07024891.1| inner-membrane translocator [Afipia sp. 1NLS2]
 gi|298591833|gb|EFI52033.1| inner-membrane translocator [Afipia sp. 1NLS2]
          Length = 304

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 87/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   IY + A G ++V G +G+++      + IG +  +I            +PV
Sbjct: 8   LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLVLVSLGITAVPV 67

Query: 99  SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             ++     M                              I    + +  + +    R+ 
Sbjct: 68  VLLLVVLVAMATTALYGWTVERIAYRPLRHSFRLAPMLSAIGMSFVLSNFSQVAQGARVK 127

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   +      F      V        V++    L A     + RT +    R    +Q
Sbjct: 128 PVPPIITGGYTLFEQDGFVVRLSNIQIIVVVTTVVLLAIFSWMVTRTRLGRDMRACEQDQ 187

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                L   +       F + ++   +AG  +      +   M  F   I   +  +LGG
Sbjct: 188 TMAALLGVDVDRTISMTFVIGASLAAVAGMMYLLYYGVVDFYM-GFVAGIKAFTAAVLGG 246

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + SL         +  +  L        +  +  F               L +V++    
Sbjct: 247 IGSLPGAMLGGLAIGLIETLWSAYFSSEYKDVAAFS-------------ILIVVLIFLPT 293

Query: 338 SLLRL 342
            LL  
Sbjct: 294 GLLGR 298


>gi|104783824|ref|YP_610322.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           entomophila L48]
 gi|95112811|emb|CAK17539.1| putative branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas entomophila L48]
          Length = 506

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 233 ITFGLLGVINMAHGEMLMLGAYSTYMVQVLLQRYAPGAIEFYPLIALPVAFAVSAGVGMA 292

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      +  +  + +         +
Sbjct: 293 LER--TVIRHLYGRPLETLLATWGISLILIQAVRLIFGAQNVEVSNPAWLSGGIQVLPNL 350

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++     +     L L RT +    R +  N+        +     + AF +
Sbjct: 351 VLPYNRLVIIGFALAVVVLTWLLLNRTRLGLNVRAVTQNRNMAACCGVSTGRVDMLAFGL 410

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    +L
Sbjct: 411 GSGIAGLGGV--ALSQVGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSLWAAFGLGIANKL 468

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 469 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 503


>gi|52143480|ref|YP_083348.1| branched chain amino acid ABC transporter, permease [Bacillus
           cereus E33L]
 gi|51976949|gb|AAU18499.1| branched chain amino acid ABC transporter, permease [Bacillus
           cereus E33L]
          Length = 333

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 61/334 (18%), Positives = 132/334 (39%), Gaps = 31/334 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 15  VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  R      + ++ I  + +IS     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 75  VALLFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YYV L    +   +
Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L  +    
Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            R T ++ +   +V+L+    L+        ++R
Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGTVKSLKNMKR 320


>gi|291286812|ref|YP_003503628.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809]
 gi|290883972|gb|ADD67672.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809]
          Length = 300

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 93/306 (30%), Gaps = 17/306 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
                 +  IY + A G ++V G + L++      Y IGA++ +I  S + +  W +  +
Sbjct: 8   FLGGLTRGSIYALIALGYTMVYGIIQLINFAHGEIYMIGAFTALIFASVFSILGWPVAAI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + + A  +                          + LI    ++       +  +   
Sbjct: 68  FIIATLAAVVYSSAYGYTIEKIAYKPLRNA---PRLSPLISAIGMSLFLQNYVLLAQTSD 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                + +  F        I+      ++     +   +  +++ T +  A R    ++ 
Sbjct: 125 FLPFPQLIPDFEFMEPISHIFSSAELAIVSTTIIVMLLLTFFIKFTNMGKAMRATAQDKT 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + SA   + G   A    +++     F   I   +  +LGG+
Sbjct: 185 MALLIGINVDRVISVTFIIGSALAALGGVLIANHIGQVNFY-IGFIAGIKAFTAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL        G     +  +  F               L L+++ R   
Sbjct: 244 GSIPGAVLGALILGWTESFATGYISSDYEDVFAF-------------ALLVLILIFRPAG 290

Query: 339 LLRLRT 344
           LL    
Sbjct: 291 LLGRSE 296


>gi|218781116|ref|YP_002432434.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218762500|gb|ACL04966.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 440

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 117/331 (35%), Gaps = 32/331 (9%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
               +  +L+ L L      ++  SM  Q+ I ++FA   ++++G  GLLS    + Y +
Sbjct: 31  AGIWLGFILISLALPKIFDSRFAMSMFNQMGIAIVFALSFNMLLGQGGLLSFGHAVFYGM 90

Query: 77  GAY-----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           G +       ++      +   LL     + +   G I+G  S +      A+ T+ + E
Sbjct: 91  GGFGAIHVLCMVNDGELRIYTELLPLAGGIFAAILGFILGFISTRRAAIPFALITMGIGE 150

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +     +       G+ GI                              I +YY++L   
Sbjct: 151 LLLASSLLLPSFFGGEEGIA------------GDRWTEITILPFKYGQAIEVYYLILIWM 198

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           FLS + +  L +T +      +RDN +    +       +   F +++ F G+AG  FA 
Sbjct: 199 FLSVAAMYLLTKTPLGQMANAVRDNHQRAQFIGYDPHKVRTFQFTLAAFFAGIAGGLFAI 258

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           + + ++ +      +  ++ + ++GG+T           +  +  +   +   +      
Sbjct: 259 NYEMVTAENLGMLPSTDILMMTVIGGITYFFGPILGAIFITFLQLVVSNITHAW------ 312

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         +   L+++     L  L
Sbjct: 313 ---------MLYFGLMFILMVMWAPDGLAGL 334


>gi|319762061|ref|YP_004125998.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|330826121|ref|YP_004389424.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317116622|gb|ADU99110.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|329311493|gb|AEB85908.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 333

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 57/302 (18%), Positives = 123/302 (40%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS          AY        +G +  L +    +
Sbjct: 30  FVMKLLCFALFASAFNLLLGYTGLLSFGHAAFLGGAAYVTGHAVKVWGATPELGLLAGLL 89

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
              A G++MG  +++ +G Y  + TL ++++     ++    T G+ G+    R      
Sbjct: 90  SGAALGLVMGWFTIRRQGIYATMITLALAQMLFFAALQLP-FTGGEDGLQGVPR------ 142

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F    +  ++ MYYV L +  L+  +I+    +      R I++N+    
Sbjct: 143 -------GKLFGVLDLSSDMTMYYVCLVIVVLAFLLIVRTIDSPFGQVLRGIKENEPRAT 195

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+A  G+AGA         +     +S +  V+ + ++GGM +L
Sbjct: 196 SLGYDTNRFKLLAFVISAAIAGLAGALKTLVLGFATLSDVHWSASGHVVLMTLVGGMGTL 255

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           S      A+++ +      +     + + + +  +     T +  +   + +L     ++
Sbjct: 256 SGPLVGAAVVVALENKIGELGNLLASLTTIDWFNTLGESVTIVTGLIFVVCVLAFRRGIM 315

Query: 341 RL 342
             
Sbjct: 316 GE 317


>gi|83719557|ref|YP_443819.1| branched-chain amino acid ABC transporter permease [Burkholderia
           thailandensis E264]
 gi|83653382|gb|ABC37445.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis E264]
          Length = 324

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 123/302 (40%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS    +  A   Y         G +  L +    M
Sbjct: 26  FMMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGTTPELGVLAGTM 85

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+++GL +++ +G Y A+ TL  +++   I ++                      
Sbjct: 86  AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 131

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R + F    +  ++ +YYV+L +   +   I+ +  +        I++N+    
Sbjct: 132 GLQGVPRGWLFGLVDLSSDLALYYVVLVVIACACLFIVRIVHSPFGQVLVAIKENEPRAT 191

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+A  G+AGA         +     ++ + +V+ + ++GGM +L
Sbjct: 192 SLGYDTDRFKLLAFILSAALAGLAGALKVVVLGFETLSDAYWTMSGLVVLMTLVGGMGTL 251

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSL-LKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +    +  +  +   + +  S     T +  +     +L     ++
Sbjct: 252 FGPLVGAALIVALEDRLGDIGGWLASVTHIDWFRSLGESATIVTGLIFIACVLAFRRGIV 311

Query: 341 RL 342
             
Sbjct: 312 GE 313


>gi|115358140|ref|YP_775278.1| inner-membrane translocator [Burkholderia ambifaria AMMD]
 gi|115283428|gb|ABI88944.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia ambifaria AMMD]
          Length = 295

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 56/308 (18%), Positives = 113/308 (36%), Gaps = 19/308 (6%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             ++  +     +Y   A GL++  G  GL++   +    +GAY+  I  S+ G  +   
Sbjct: 2   SSFVIHLLTIGCLYATMALGLNLQAGYAGLVNFGFIAFAGLGAYAAGI-ASQLGWPLLSA 60

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + ++   +GA  +++     +   DY  IATL ++EI +   +    +T G  GI     
Sbjct: 61  LALAVAAAGALALVVARLGRQLAADYWGIATLAIAEILRTTALNESWLTGGAQGIGGIAP 120

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           L+       +               +    V  G   L+ +    L  +    A + +R+
Sbjct: 121 LFPGLRAPWAD--------------LAFLAVTAGCLALTYATYRRLTASRFGRALKVMRE 166

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
                       +  K  A    +    +AGA        + PD    SE   + ++V++
Sbjct: 167 EPALAVCFGYDPLALKTRACIAGALPAAVAGALATWYIGYVGPDAMIASETFALWTVVMV 226

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S + +   T I+    +    +  +  + L             L+ + L   ++ R
Sbjct: 227 GGLGSHAGVLVGTLIV----QAVYALAPFLKDWLGVGSDLTGAVRLGLVGLMLLACVIWR 282

Query: 336 SHSLLRLR 343
            H L+  R
Sbjct: 283 PHGLVPER 290


>gi|306819905|ref|ZP_07453558.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304552062|gb|EFM40000.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 294

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 95/307 (30%), Gaps = 28/307 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLL 95
           + +      IY + + G ++V G + L++        +GAY   +  S        ++L 
Sbjct: 7   LINGLQIGSIYALVSLGYTMVYGIVKLINFAHGDIIMVGAYVAFMCVSALTSMGLPVYLA 66

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  +       G+++   + K   +   I++LI +     +L     +            
Sbjct: 67  VVPAIAFCSLLGVVIEKVAYKPMRNSARISSLITAIGVSLLLQNAFMLIFSPNPRP---- 122

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                    ++          +   I     +     L   + L++ ++    A   + +
Sbjct: 123 -------FDTVFSGKPIELGELSINISTIITITVSVVLMIILQLFITKSKAGKAMVAVSE 175

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   +   +       FA+ S    +A   + ++  +I+P M      +      +L
Sbjct: 176 DFSAAQLVGINVDNTISMTFAIGSGLAAVASILYVSAYPQITPTM-GSMLGLKAFVAAVL 234

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  +        I+  V  L                         ++   L +V+L +
Sbjct: 235 GGIGIIPGAMIGGFIIGIVEALTKAYISTELADA-------------VVFAILVVVLLFK 281

Query: 336 SHSLLRL 342
              +   
Sbjct: 282 PEGIFGT 288


>gi|225863898|ref|YP_002749276.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus 03BB102]
 gi|225787958|gb|ACO28175.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus 03BB102]
          Length = 333

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 61/334 (18%), Positives = 132/334 (39%), Gaps = 31/334 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 15  VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  R      + ++ I  + +IS     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 75  VALLFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YYV L    +   +
Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L  +    
Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            R T ++ +   +V+L+    L+        ++R
Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGTVKSLKNMKR 320


>gi|171057890|ref|YP_001790239.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
 gi|170775335|gb|ACB33474.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
          Length = 333

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 58/326 (17%), Positives = 120/326 (36%), Gaps = 26/326 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L+    L +   L    S   + S+  Q  IY +FA G+ +++   G++S    + + 
Sbjct: 6   LFLSTAAALAIGAALALGVSSGTLLSLLTQATIYAVFALGVGLLLRQNGMVSFGHALFFG 65

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
              Y   IL     +     I ++ +   A   ++GL  ++  G    + TL + ++   
Sbjct: 66  SSGYIVAILLQLKAVPAEAAIVIAVLGLSAFAFLIGLVIVRVPGVAFGMLTLAVGQMAYL 125

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
              + + +T G  G+ V                 F   +S +     M  +   +  L+ 
Sbjct: 126 TASRSRGLTGGADGMSVEWPST-----------LFGLQTSLLFSPAGMLMLSWSVLVLTL 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             I  L RT         RDN++    +    +  + + +A+S+    +AG   A +   
Sbjct: 175 LAIALLLRTRFGAITEAARDNEERARFIGIRTLMPQAALYALSAGVTSLAGVLAALNTGF 234

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ISP+   +S + + + +V++GG  +L   A   A+     ++      ++          
Sbjct: 235 ISPESLHWSLSGVALMMVVVGGTRALWGPALGAAVYFLAKDVLGDHAQHW---------- 284

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                  +   AL +VI+     L  
Sbjct: 285 -----MAIFGTALIVVIVFAPEGLSG 305


>gi|71734857|ref|YP_276586.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|71555410|gb|AAZ34621.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 529

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 315

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGGVMAAFGLGIANKI 491

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 492 LEPQIGAVLGKVLILALIILFIQK-------------RPQGLFALKGR 526


>gi|119717237|ref|YP_924202.1| inner-membrane translocator [Nocardioides sp. JS614]
 gi|119537898|gb|ABL82515.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Nocardioides sp. JS614]
          Length = 500

 Score = 82.2 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 88/298 (29%), Gaps = 16/298 (5%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLSIWLLIPVSAMISGACG 107
             M A GLS+V G+ GL +         GA  ++ I      +++  L     ++ G   
Sbjct: 216 LAMAALGLSMVFGTTGLTNFAHGELVTFGALVAWGIDLLPGQITMPGLGWNITVVVGVIV 275

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
             +    L    D L    L +       ++      +                      
Sbjct: 276 AFVAGGVLGLLNDKLLWKPLRIRGTGIIAMMIVSIGLSIFMRSVFQYVAGGQNHNYSQYS 335

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
               +    V+       V++    +   + L ++ T I  A R + DN     S    +
Sbjct: 336 ASKPWEIGPVLITARDVVVIIVGVAVLVVVSLAIQLTRIGKATRAVADNPGLAASSGINV 395

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
                  + VS A   ++GA    ++         F   +++ S V+LGG+ ++      
Sbjct: 396 QQVIAVVWTVSVAIAALSGALLGITQGF--DFQLGFKLLLLMFSAVVLGGLGTIWGAMVG 453

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
             ++  +VE+   +       +        +                R   LL     
Sbjct: 454 AFLIGILVEVSTLVVPSELKYVGGLAVLVLVLLV-------------RPQGLLGRAQR 498


>gi|313902800|ref|ZP_07836197.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Thermaerobacter subterraneus DSM 13965]
 gi|313466920|gb|EFR62437.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Thermaerobacter subterraneus DSM 13965]
          Length = 336

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 96/315 (30%), Gaps = 36/315 (11%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91
           + +      IY + A G ++V G + +++      Y +GAY    + +            
Sbjct: 43  LINGLQLGAIYALIAVGYTMVYGVVKMINFAHGDVYMVGAYVAFAVTAAAAAGDVTPGQA 102

Query: 92  ---IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
                + +  +       G ++   + +   +   +A L  +     +L     I  G  
Sbjct: 103 LVLFAVGLVAAMAGCALLGALIERTAYRPLRNQPRLAALTTAIGVSLLLENLMQIIAGPN 162

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                            LI   +   + ++  +      L    + A +   + RT +  
Sbjct: 163 PRP-----------FPGLIPLRQVDLAGIVINLRFGVAFLIALVMMAGLQYLVMRTRVGK 211

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           A R +  +  A   +   +     + F + SA    AG     +  RI P M      + 
Sbjct: 212 AMRAVAYDLDAARLMGIDVNRIIAAVFMLGSALAACAGVLVGVTYARIDPFM-GIIPGLK 270

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
                +LGG+ S+        ++         +      +              +  + L
Sbjct: 271 AFVAAVLGGIGSIPGAMLGGLLMGMAEVGVASVRSELTGA--------------VAFLVL 316

Query: 329 FLVILMRSHSLLRLR 343
            +V+L +   LL  R
Sbjct: 317 IIVLLFKPTGLLGER 331


>gi|256845865|ref|ZP_05551323.1| urea ABC transporter, permease UrtB [Fusobacterium sp. 3_1_36A2]
 gi|256719424|gb|EEU32979.1| urea ABC transporter, permease UrtB [Fusobacterium sp. 3_1_36A2]
          Length = 295

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 91/306 (29%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL---GSRYGLSIWLL 95
           I +      IY + + G ++V G   L++        IGAY+ +      +  GL IW  
Sbjct: 7   IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYTSLFSIPLFTSLGLPIWAT 66

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  + ++    G +    + +   +   I+ LI +      L                  
Sbjct: 67  VIPAIIVCAVIGCLAERIAYRPLRNSPRISNLITAIGVSLFLENVFMKIFTPNTRSFPKI 126

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                 +  + I                   ++    LS  + L++++T    A      
Sbjct: 127 FDQAPISFGANIH----------ISFGAIVTIVITLVLSIGLQLFMKKTKYGKAMIATSQ 176

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   +   +       FA+ S    +    + ++  +I P M      I      +L
Sbjct: 177 DYAASELVGINVDRTIQLTFAIGSGLAAVGSVLYVSAYPQIQPLM-GSMLGIKAFVAAVL 235

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  L        IL  V  L              F               L +V+L +
Sbjct: 236 GGIRILPGAVLGGFILGIVESLTRAYLSSQLADAFVFS-------------ILIIVLLFK 282

Query: 336 SHSLLR 341
              +L 
Sbjct: 283 PTGILG 288


>gi|254720184|ref|ZP_05181995.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. 83/13]
 gi|265985190|ref|ZP_06097925.1| inner-membrane translocator [Brucella sp. 83/13]
 gi|306838676|ref|ZP_07471512.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. NF 2653]
 gi|264663782|gb|EEZ34043.1| inner-membrane translocator [Brucella sp. 83/13]
 gi|306406319|gb|EFM62562.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. NF 2653]
          Length = 327

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 130/337 (38%), Gaps = 33/337 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +   L+  +         +     +++L + +FA   ++++G  G+LS      +
Sbjct: 21  LSAIVLGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 76

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              AY        +G+S  L + +  + + A G+++G  +++ +G Y  + TL ++++F 
Sbjct: 77  GGAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 136

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              ++                       ++ + R F F    +   + MYY +L +  L 
Sbjct: 137 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 182

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              I  +  +      +++R+N+    SL  ++   KL+AF +S+   G+AG   A    
Sbjct: 183 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 242

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             +     +  +  VI + +LGG+ +L       A ++ +       +F           
Sbjct: 243 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 293

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 T +  +     +L+    ++     S   ++
Sbjct: 294 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 324


>gi|33600758|ref|NP_888318.1| putative permease component of branched-chain amino acid transport
           system [Bordetella bronchiseptica RB50]
 gi|33568358|emb|CAE32270.1| putative permease component of branched-chain amino acid transport
           system [Bordetella bronchiseptica RB50]
          Length = 649

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 64/327 (19%), Positives = 124/327 (37%), Gaps = 34/327 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L  V    L       +   Y   +   ILI  +FA  L  ++G  G+ S      +
Sbjct: 323 LRILWGVLLAALATLPLLAQWLPYAVVLTQDILIAALFAVSLHFMMGPGGMHSFGHAAYF 382

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY   +L     L +   +  + +++    +I G   ++  G YLA+ TL  S+I  
Sbjct: 383 GLGAYGAALLLKAASLPMEAALAFAPLVAALGALIFGWFCVRLSGVYLAMLTLAFSQIVW 442

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           +++ +W   T G  G+       +L  T    +      ++ +     ++          
Sbjct: 443 SVVFQWDDFTGGSNGMIGVWPAEWLSGTAYYYLALAVVAAAVLGLRRVLF---------- 492

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                    +    A R  RD+     ++   +   + +AF V+ AF G+AGA +A S+ 
Sbjct: 493 ---------SPFGYAMRAGRDSSLRADAIGIDVKRVQWAAFVVAGAFGGLAGALYAFSKG 543

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ISPD    S+++  + +V+LGG+ +L            + +       Y+         
Sbjct: 544 SISPDTMAVSKSVDGLVMVLLGGIQTLIGPVVGATAFNVLQDYIMRATEYWRA------- 596

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   L    + L++L+    +  
Sbjct: 597 --------LFGGVILLLVLVFPQGIAG 615



 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 51/307 (16%), Positives = 101/307 (32%), Gaps = 18/307 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95
           + +   +     + A GLS++ G   +++      Y +G   AYS V       L  W  
Sbjct: 10  LLNGLAEASSLFLVAAGLSLIFGVTRIVNFAHGSLYMLGVYVAYSIVERVGGTALGFWFG 69

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  +++  G  G  + +  L+       +  L+ +     ++        G         
Sbjct: 70  LVAASLAVGVVGAAIEVVLLRRIYRAPELFQLLATFALVLVINDAALWIWGA-------- 121

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                   R+             Y ++   +++    +   + L L RT      R    
Sbjct: 122 --EDLLGRRAPGLTGAVDLLGRQYPVYNLVLIVIGPVVLGLLWLLLTRTRWGTLVRAATQ 179

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++   +L     +     FA+ +   G+ GA                        IV++
Sbjct: 180 DREMLGALGVNQAWLFTGVFALGAMLAGLGGALQLPREPA--SLSLDLRTIGDAFVIVVV 237

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S+     A  I+  +  LC G+      +LL F  SF+     +    + LV++ R
Sbjct: 238 GGMGSIPGAYVAALIIAEIKALCIGLGT---VTLLGFSVSFSKLTLVVEFAFMALVLVFR 294

Query: 336 SHSLLRL 342
              L   
Sbjct: 295 PWGLFGR 301


>gi|86137779|ref|ZP_01056355.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85825371|gb|EAQ45570.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 410

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 52/367 (14%), Positives = 109/367 (29%), Gaps = 37/367 (10%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +  +L L  +   LL         S  ++ ++G + L   + A  + +V G  G+LSL  
Sbjct: 15  FLAVLALFVLGVTLLAEGAGAGVISTSFVKTLG-KTLCLALIAVAMDLVWGYTGILSLGH 73

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVS-----------------AMISGACGMIMGLP 113
              + +G Y   +          ++  ++                  +          L 
Sbjct: 74  FAFFGLGGYMIGMWLMYARTQAIVVSSLAEAPIPATESEIVDAIGNQIFGVVGSREFPLI 133

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
            +      L +  ++       ++  W    +   G+Y++     +   +   +      
Sbjct: 134 WMFADSLVLQLVLVVAVPGILALVFGWLAFRSRVTGVYLSILTQAMTLGLALYLFQNDSG 193

Query: 174 SSF------------------VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                    I+ ++       L      W+      +  R IRD
Sbjct: 194 LRGNNGLSGLQNLPGLDHVPQATMSIWFFWASAAALALGYLFAAWIVSGKFGSVLRGIRD 253

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N+     L  ++   KL  F V++   G+AGA +      I+P       +I +   V +
Sbjct: 254 NEARVRFLGYSVEGYKLFIFTVTAIIAGIAGALYYPQAGIINPAEIAPVASIYLAVWVAI 313

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG   L         +  V     G        L  +   +      ++ ++  LV L  
Sbjct: 314 GGRGRLYGAVIGAVFVSLVSSWFTGGQAPDL-DLGFYTLKWVDWWLIVLGLSFVLVTLFA 372

Query: 336 SHSLLRL 342
              +  L
Sbjct: 373 PRGIGGL 379


>gi|146280811|ref|YP_001170964.1| ABC transporter, membrane spanning protein [Pseudomonas stutzeri
           A1501]
 gi|145569016|gb|ABP78122.1| ABC transporter, membrane spanning protein [Pseudomonas stutzeri
           A1501]
          Length = 328

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 57/330 (17%), Positives = 126/330 (38%), Gaps = 29/330 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             +L+ +         +     +++L + +FA   ++++G  G+LS      +   AY  
Sbjct: 21  VLILIGVVALTLAPFYFYPIFLMKVLCFALFACAFNLLLGYTGILSFGHAAFFGGSAYFT 80

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                 +GL+  L I V    +   G+I+G  +++ +G Y  + TL +S++F    ++  
Sbjct: 81  AHAVKEWGLTPELGILVGVAGAAFLGLIIGFLAIRRQGIYSTMITLALSQMFFFFCLQAS 140

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
                                ++++ R   F    +   ++MY+ +L +      +I  +
Sbjct: 141 FTHG--------------EDGIQNIPRGHLFGLIDLEEPLYMYFFVLSVFLAGMLLIWRV 186

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +      R+IR+N+    SL  T+   KL AF +S+A  G+AG   A      +    
Sbjct: 187 IHSPYGMILRSIRENENRAISLGYTVSRYKLGAFVMSAALAGLAGGLKALVFQFATLTDV 246

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            +  +  V+ + +LGG+ +L       A++  +                          T
Sbjct: 247 SWQMSGEVVLMTLLGGIGTLVGPVFGAALVTTLGNYFATSELPV---------------T 291

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            +  I   + +L+    ++     S   ++
Sbjct: 292 LVTGIIFMVCVLVFRRGMIGELYASRLGKK 321


>gi|293602431|ref|ZP_06684877.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292819193|gb|EFF78228.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 354

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 80/343 (23%), Positives = 139/343 (40%), Gaps = 23/343 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +R ++      +   +   + F+ + A  S   + ++ I  LI  + A GL+I+VG
Sbjct: 18  QIFPIRQDR------IFIWLLLAVAFIAVPALSSDYLLRAILIPFLILSLAAVGLNILVG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-WLLIPVSAMISGACGMIMGLPSLKFRGD 120
             G +SL      A+GAY+    G R+      + I +    +   G+I G+PSL+ RG 
Sbjct: 72  YCGQISLGTGAFMAVGAYAAWNFGVRFPGMPLIIQILLGGCFATLVGVIFGIPSLRIRGL 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL          ++    TN  +   V+                       V   
Sbjct: 132 YLAVATLAAQFFVDWAFLRIPFFTNYSSSGNVSVPPLTAF-------------GLPVQSA 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y  +L +  + + +   L R AI   W  IRD   A   +    ++AKL+AFAVSS 
Sbjct: 179 MEKYLFVLILVVIFSLLAKNLVRGAIGRQWMAIRDMDVAASVIGIRPMYAKLTAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            +G+AGA +         P  F  + +  ++ +VI+GG+ S+       A ++ V     
Sbjct: 239 IVGVAGALWGYIHLGSWEPLAFDLTRSFQLLFMVIIGGLGSIIGSFFGAAFIVLVPVALS 298

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +       +     +       +    +   ++   H L RL
Sbjct: 299 NIPHAL--GIPLSVDTAAHIEHMVFGALIVFFLIAEPHGLARL 339


>gi|33596923|ref|NP_884566.1| putative permease component of branched-chain amino acid transport
           system [Bordetella parapertussis 12822]
 gi|33566374|emb|CAE37619.1| putative permease component of branched-chain amino acid transport
           system [Bordetella parapertussis]
          Length = 627

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 64/327 (19%), Positives = 124/327 (37%), Gaps = 34/327 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L  V    L       +   Y   +   ILI  +FA  L  ++G  G+ S      +
Sbjct: 301 LRILWGVLLAALATLPLLAQWLPYAVVLTQDILIAALFAVSLHFMMGPGGMHSFGHAAYF 360

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY   +L     L +   +  + +++    +I G   ++  G YLA+ TL  S+I  
Sbjct: 361 GLGAYGAALLLKAASLPMEAALAFAPLVAALGALIFGWFCVRLSGVYLAMLTLAFSQIVW 420

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           +++ +W   T G  G+       +L  T    +      ++ +     ++          
Sbjct: 421 SVVFQWDDFTGGSNGMIGVWPAEWLSGTAYYYLALAVVAAAVLGLRRVLF---------- 470

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                    +    A R  RD+     ++   +   + +AF V+ AF G+AGA +A S+ 
Sbjct: 471 ---------SPFGYAMRAGRDSSLRADAIGIDVKRVQWAAFVVAGAFGGLAGALYAFSKG 521

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ISPD    S+++  + +V+LGG+ +L            + +       Y+         
Sbjct: 522 SISPDTMAVSKSVDGLVMVLLGGIQTLIGPVVGATAFNVLQDYIMRATEYWRA------- 574

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   L    + L++L+    +  
Sbjct: 575 --------LFGGVILLLVLVFPQGIAG 593



 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 97/294 (32%), Gaps = 18/294 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
            A GLS++ G   +++      Y +G   AYS V       L  W  +  +++  G  G 
Sbjct: 1   MAAGLSLIFGVTRIVNFAHGSLYMLGVYVAYSIVERVGGTALGFWFGLVAASLAVGVVGA 60

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
            + +  L+       +  L+ +     ++        G                 R+   
Sbjct: 61  AIEVVLLRRIYRAPELFQLLATFALVLVINDAALWIWGA----------EDLLGRRAPGL 110

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                     Y ++   +++    +   + L L RT      R    +++   +L     
Sbjct: 111 TGAVDLLGRQYPVYNLVLIVIGPVVLGLLWLLLMRTRWGTLVRAATQDREMLGALGVNQA 170

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
           +     FA+ +   G+ GA                        IV++GGM S+     A 
Sbjct: 171 WLFTGVFALGAMLAGLGGALQLPREPA--SLSLDLRTIGDAFVIVVVGGMGSIPGAYVAA 228

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            I+  +  LC G+      +LL F  SF+     +    + LV++ R   L   
Sbjct: 229 LIIAEIKALCIGLGT---VTLLGFSVSFSKLTLVVEFAFMALVLVFRPWGLFGR 279


>gi|332798398|ref|YP_004459897.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp.
           Re1]
 gi|332696133|gb|AEE90590.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter
           sp. Re1]
          Length = 289

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 55/304 (18%), Positives = 98/304 (32%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +       Y + A G ++V G L L++      Y IGA+  + + S Y L  ++ + +
Sbjct: 6   IINGLTLGSTYSLIALGYTMVYGILELINFAHSEIYMIGAFIGLTMVSVYKLPFFVALLI 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S + S   G+I+   + K       IA LI +      L     +  G            
Sbjct: 66  SMIGSCILGIIIEKAAYKPLRKANRIAPLISAIGVSIFLQNAVLMIAGPQARA------- 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S +                  +L     L   +   +++T +  A R    +++
Sbjct: 119 ----FPSGLNITTLNIGGFRISTLQLLILFVSIILMVGLHFLIQKTKLGQAMRATAQDKE 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   I       FA+ SA  G AG       D +   M  F   +      +LGG+
Sbjct: 175 AAQLMGIKIDHVITFTFAIGSALGGAAGVLVGVYFDSVD-PMMGFFPGLKGFVAAVLGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL  V  +                   +     +    L  ++L++   
Sbjct: 234 GSIPGAMLGGLILGLVEMVGAVY--------------MSRYKDAIAFAVLIFILLLKPTG 279

Query: 339 LLRL 342
           LL  
Sbjct: 280 LLGR 283


>gi|315444714|ref|YP_004077593.1| urea ABC transporter membrane protein [Mycobacterium sp. Spyr1]
 gi|315263017|gb|ADT99758.1| urea ABC transporter membrane protein [Mycobacterium sp. Spyr1]
          Length = 370

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/336 (15%), Positives = 100/336 (29%), Gaps = 29/336 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
              L+   L       +  S+  + L + + A G+ +  G  G+L L   + + +G Y  
Sbjct: 16  VAALVLFVLAPAILSDFRLSLLGKFLCFAIVAVGIGLAWGRGGMLVLGQGVFFGLGGYMM 75

Query: 82  VILGSRYGLSI---------------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            +        +                L    +   S A  +I  +         L +  
Sbjct: 76  AMHLKIADAQLRGDDVPDFMQIQGVRELPSYWTPFASPAVTLIAIVVIPTGIAVALGLGV 135

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
                      I  + +    A + V          +     FF F  +       +Y++
Sbjct: 136 FKRKVKGAYFAILSQALAAALAILLVGQTSLGGSNGLNRFRTFFGFTLNDPANRRMLYFI 195

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
              +  L  +++  L ++        +RD ++    L       K+ A+AV++ F  +AG
Sbjct: 196 AAAVLLLVVAVVRQLMQSRYGELLVAVRDGEERVRFLGYDPANIKVVAYAVAALFASIAG 255

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A FA     I+P       +I  +  V +GG  +L         +     L        +
Sbjct: 256 ALFAPIVGFIAPSQVGILPSIAFLIGVAIGGRATLLGPVLGAIGVAWAQTLFSERFPSAW 315

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                              +   LV+      L  L
Sbjct: 316 TYGQ--------------GLLFILVVGFLPAGLAGL 337


>gi|171057771|ref|YP_001790120.1| urea ABC transporter permease UrtC [Leptothrix cholodnii SP-6]
 gi|170775216|gb|ACB33355.1| urea ABC transporter, permease protein UrtC [Leptothrix cholodnii
           SP-6]
          Length = 372

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/329 (13%), Positives = 90/329 (27%), Gaps = 32/329 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
                 Y   +  +I+ Y + A  + ++ G  G+LSL   + +A+G Y   +        
Sbjct: 49  PLHFSDYYVQLTGKIMCYAICALAMDLIWGYTGILSLGHGLFFALGGYGMGMYLMRQIGL 108

Query: 87  ----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF--- 133
                           W  +P     S +    M L  L      L              
Sbjct: 109 DGNYKSTLPDFMVFLDWKTLPWHWSFSESFFGQMLLVVLVPGLLALVFGFFAFRSRIKGV 168

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
              +I            +  +  +          R    P +     + ++ +   +   
Sbjct: 169 YFSIITQAMTFAAMLLFFRNETGFGGNNGFTDFKRILDIPLAQPSTRMTLFMLTGVVLVG 228

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              +   +  +      + IRD +          +  KLS + +S+    +AGA +    
Sbjct: 229 FFLMARAIVNSKYGRVLQAIRDAESRVMFTGYDPLAYKLSIWTLSAVMCAVAGALYVPQV 288

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             I+P     + +I +     +GG  +L         + G                  F 
Sbjct: 289 GIINPGEMSPAASIEIAIWAAVGGRATLIGPILGAFFVNGAKSW--------------FT 334

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             F       +      V L   H ++ L
Sbjct: 335 QVFPEFWLYFLGALFIAVTLFLPHGIVGL 363


>gi|323357255|ref|YP_004223651.1| branched-chain amino acid ABC transporter permease [Microbacterium
           testaceum StLB037]
 gi|323273626|dbj|BAJ73771.1| ABC-type branched-chain amino acid transport system, permease
           component [Microbacterium testaceum StLB037]
          Length = 327

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 60/300 (20%), Positives = 112/300 (37%), Gaps = 8/300 (2%)

Query: 55  GLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
           GL+I  G  GLL++       +GAY + +        +  LI    ++     ++  +P+
Sbjct: 28  GLNIHFGYTGLLNMGQAGFMLLGAYGFAVSVQAGLGFVPALIVALLVVLVYSFILG-VPT 86

Query: 115 LKFRGDYLAIATLIMSEIFQNI-----LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           LK RGDYLAI T+  +EI + +     L      +NG  G    D    L          
Sbjct: 87  LKLRGDYLAIVTISAAEIIRMVGRSSVLGPITNGSNGIPGDRYRDPFNGLSFFGDGQTTI 146

Query: 170 FRFPSSFVIY-EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
             +          ++  V   +  +   ++  L R+      + IR+++ A  SL  +  
Sbjct: 147 LWWTYDNTGVSGWWVRAVAWAVVAVLLVLVWLLIRSPWGRVLKGIREDEDAVRSLGKSAF 206

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
             K+ A  +     G+AG  +      + PD    S    + + ++LGG  ++       
Sbjct: 207 SFKMQALILGGLIGGIAGIVYVMP-SSVQPDALGRSMTFFIWTALLLGGAATIFGPVLGA 265

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
            +   V     G+        +            L+ IAL L+++ R   +L  +   +F
Sbjct: 266 ILFFVVRIFIQGVTRLIVPEGVWSGQQTEQFSWILIGIALMLLVIFRPQGILGNKKELSF 325


>gi|316935500|ref|YP_004110482.1| urea ABC transporter permease UrtC [Rhodopseudomonas palustris
           DX-1]
 gi|315603214|gb|ADU45749.1| urea ABC transporter, permease protein UrtC [Rhodopseudomonas
           palustris DX-1]
          Length = 383

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 103/347 (29%), Gaps = 36/347 (10%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++ +    +L + +       +  ++  + L Y   A GL +  G  G+LSL   + + +
Sbjct: 12  VIGLAALAVLLVVILPLSLDVFRLNLVAKYLTYAFVALGLVLCWGFGGILSLGQGVFFGL 71

Query: 77  GAYSYVILGS--------------------RYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
           G Y   +                            I  L             I+ +  + 
Sbjct: 72  GGYCMAMYLKLEASSVENTKIQSTPGIPDFMDWNQITQLPWFWQPFHSLTLTIVAILVVP 131

Query: 117 FRGDYLAIATLIMSEI--FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
               YL  A +    +      +I           I            +  L     +  
Sbjct: 132 TVFAYLIGAAMFKRRVGGVYFAIITQAIAAIMTILIIGQQGYTGGINGITDLRTLKGWDI 191

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                ++ +Y+V +   F    + L++R   +      +R+ +        ++   K+ A
Sbjct: 192 RPDHAKVVLYFVEVAFLFGCILLALFVRHAKLGRILVAMREKEDRVRFSGYSVANFKIFA 251

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F +++ F  + GA F  +   +SP       +I ++    +GG  S+      T ++   
Sbjct: 252 FCLAAMFAAIGGAMFTLNVGFMSPSFVGIVPSIEMVIYTAVGGRLSIFGAVYGTLLVNFA 311

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                               SF       +      V+L+  + L  
Sbjct: 312 KTSLSE--------------SFPQLWLFGLGALFIAVVLIFPNGLAG 344


>gi|220921217|ref|YP_002496518.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219945823|gb|ACL56215.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 334

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 55/269 (20%), Positives = 113/269 (42%), Gaps = 14/269 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            ++     +++I+ + A  L +V+G   L+S        IGAY+  IL +     + + +
Sbjct: 49  PFLVVTATRMMIFGLAALSLDLVLGYGALVSFGHAAFVGIGAYAVGILDAHGIRDLAVQV 108

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P +        ++ G  SL+ RG Y  + TL   ++    ++       G  G+ ++ R 
Sbjct: 109 PAALGACALFALVTGAISLRTRGVYFIMITLAFGQMAYFFMVSLAS-YGGDDGMALSRRS 167

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G  +             +  ++ +YY +L +   +   +  +  +      R  RDN
Sbjct: 168 TLFGQPL-------------LEGDLPLYYAVLALLAAALVCLRRVVGSRFGRVLRGTRDN 214

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                ++    +  +L+A+A++ A  G+AG   A   + +SP    +  +  +I +V+LG
Sbjct: 215 ALRMEAIGFDALPYRLTAYAIAGALAGLAGILLANQAEFVSPAYMSWQRSGELIVMVVLG 274

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GM +L       A LI V E     + ++
Sbjct: 275 GMGTLVGPVVGAAALIAVEEGLAHYSEHW 303


>gi|154486889|ref|ZP_02028296.1| hypothetical protein BIFADO_00722 [Bifidobacterium adolescentis
           L2-32]
 gi|154084752|gb|EDN83797.1| hypothetical protein BIFADO_00722 [Bifidobacterium adolescentis
           L2-32]
          Length = 309

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 104/304 (34%), Gaps = 13/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A G ++V G + L++        +G+Y   ++ +   +  + L   
Sbjct: 13  IFNGLKIGSVYSLVALGYTMVYGIIRLINFAHGDFIMVGSYV--LMLTIPAIVAFGLPAW 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+I      +     ++                    +     + NG   I+ AD    
Sbjct: 71  VAVIPAILMCVAVGVIVERAAYKPVREKGNSMTALITAIAMSLLLENGSQAIFGAD---- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              TV ++I+        +  +      ++    +  ++ L++  T    A R + ++++
Sbjct: 127 -YQTVPTIIQIPTLAIGKLKIDGATIITIVLGVIIMVALQLFVTYTKQGKAMRAVSEDKE 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S    +A   +  S  ++S  M      +      +LGG+
Sbjct: 186 ASILMGINVNSTITLTFAIGSGLAAVASLMYCVSYPQVS-PMMGAMLGLKAFVAAVLGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  V  L           ++    S       ++   L +V+L++   
Sbjct: 245 GSIPGAMVGGLVIGVVESLTKAYIGTITGGVITSAFSDA-----IVFGILIIVLLVKPSG 299

Query: 339 LLRL 342
           L+  
Sbjct: 300 LMGE 303


>gi|167720835|ref|ZP_02404071.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei DM98]
          Length = 353

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 93/347 (26%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + V    L+     A     Y  ++  +++ Y + A  L +V G  G+LSL   + 
Sbjct: 10  IAVGVGVPLAALVAPEASAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLF 69

Query: 74  YAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +A+G Y+  +                                           ++ L   
Sbjct: 70  FALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPA 129

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +         +     +I            Y  +  +          R   F  +
Sbjct: 130 ALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAIT 189

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +          S      +  + +      IRD +     L  + +  KL  +
Sbjct: 190 SPGTRTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVW 249

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+    +AGA +      I+P       +I +   V +GG  +L         + G  
Sbjct: 250 VVSAVLCAIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAK 309

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +                  F       + +   LV L+    ++ L
Sbjct: 310 SVFTAY--------------FAEYWLFFLGLIFVLVPLVLPRGIMGL 342


>gi|301064249|ref|ZP_07204692.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
 gi|300441694|gb|EFK06016.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
          Length = 311

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 58/323 (17%), Positives = 121/323 (37%), Gaps = 33/323 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++   ++          ++   +   ILIY +FA  L++V+G  G+   N  + + +GA
Sbjct: 11  ILLLVGIILFLTFPLFVSRFYVYLTTVILIYGLFATSLNLVLGYGGIFQFNHAVFFGMGA 70

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y   ++ +R  LS W+   V  ++S    +I+GL  ++    Y  +  + +  +   ++ 
Sbjct: 71  YGAALVITRSDLSPWIGFLVGPLVSALMSLIIGLICIRLSKLYFGMLQISLGSLIWAVVY 130

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +W   T G  GI+                         +      YY  L +  L+   I
Sbjct: 131 RWYGFTGGDDGIHGIPMP------------------DIISSSTNTYYFTLFIVSLAFFTI 172

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + ++   +  + IRDN      +   +   +L A   S  F G+AG  F    + + P
Sbjct: 173 YKIIKSPFGSVIQGIRDNPIRSKMIGVDVPRHQLVAIVFSGFFAGIAGVLFVIVENAVFP 232

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           DM  ++ ++  + + +LGGM +         +++ +         Y+             
Sbjct: 233 DMLFWTLSLEAMIMCLLGGMYTFMGPIFGAMVIVLLRTSISTFTVYWG------------ 280

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
                + I L  +I      +L 
Sbjct: 281 ---LFLGIILMFIIFFLPDGVLG 300


>gi|170702904|ref|ZP_02893746.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
 gi|170132184|gb|EDT00670.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
          Length = 295

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 57/308 (18%), Positives = 115/308 (37%), Gaps = 19/308 (6%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             ++  +     +Y   A GL++  G  GL++   +    +GAY+  I  S+ G  ++  
Sbjct: 2   SSFVIHLLTIGCLYATMALGLNLQAGYAGLVNFGFIAFAGLGAYAAGI-ASQLGWPLFSA 60

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + ++   +GA  +++     +   DY  IATL ++EI + I +    +T G  GI     
Sbjct: 61  LALAVAAAGALALVVARLGRQLAADYWGIATLAIAEILRTIALNESWLTGGAQGIGGIAP 120

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           L+       +               +    V  G   L+ +    L  +    A + +R+
Sbjct: 121 LFPGLRAPWAD--------------LAFLAVTAGCLALTYATYRRLTASRFGRALKVMRE 166

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
                       +  K  A    +    +AGA        + PD    SE   + ++V++
Sbjct: 167 EPALAVCFGYDPLALKTRACIAGALPAAVAGALATWYIGYVGPDAMIASETFALWTVVMV 226

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S + +   T I+    +    +  +  + L             L+ + L   ++ R
Sbjct: 227 GGLGSHAGVLVGTLIV----QAVYALAPFLKDWLGVGSDLTGAVRLGLVGLMLLACVIWR 282

Query: 336 SHSLLRLR 343
            H L+  R
Sbjct: 283 PHGLVPER 290


>gi|282862072|ref|ZP_06271135.1| inner-membrane translocator [Streptomyces sp. ACTE]
 gi|282563097|gb|EFB68636.1| inner-membrane translocator [Streptomyces sp. ACTE]
          Length = 309

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 92/305 (30%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      + IG +  + +         LL  +
Sbjct: 8   LANGLILGAMYGLIAIGYTMVYGIIQLINFAHGEIFMIGGFGALTVYLGLPSGFSLLAAI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             MI G     + +     R  Y  +            LI    ++              
Sbjct: 68  PLMIVGGVICSVAVSVAAERFAYRPLR----GAPRLAPLITAIGLSLALQQAVWMWYPDA 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                    +           +    +VL+       ++ L++ +T      +    +  
Sbjct: 124 TKDRSFPQFKGEAIDLFGASIQRGDLFVLVAAPVCMLALGLFVSKTRAGRGMQATSQDPD 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        + AFA+ +AF  +A   +     +I   M  F   +   +  +LGG+
Sbjct: 184 TAKLMGINTDRIIVMAFAIGAAFAAVAAVAYGLKNGQIGFRM-GFIMGLKAFTAAVLGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L     L  G         L                 L LV+L+R   
Sbjct: 243 GNIYGAMLGGVVLGVAEALATGYMSDVPGMEL---FGGGAWKDVWAFALLILVLLIRPQG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|121592590|ref|YP_984486.1| inner-membrane translocator [Acidovorax sp. JS42]
 gi|120604670|gb|ABM40410.1| amino acid/amide ABC transporter membrane protein 1, HAAT family /
           amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Acidovorax sp. JS42]
          Length = 655

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/305 (17%), Positives = 111/305 (36%), Gaps = 33/305 (10%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y   +   I I  +FA  L  ++G  GL S      + +GAY   +L       +   +
Sbjct: 364 SYATVLLTDIAIAALFAASLHCILGPGGLHSFGHAAYFGLGAYGAALLVRWLDWPMGTAL 423

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +  +++ A  ++ G   ++  G  L + TL  ++I   I  +W   T G  GI      
Sbjct: 424 LLGPLVAAAGALVYGWFCVRLSGVSLTMLTLAFAQITWAIAYQWDGFTGGSNGITGVWPP 483

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
            +                         Y+++L +      ++  +    +  A R  RD+
Sbjct: 484 QW------------------AAQGAGFYWLVLALAVAGIYLLRRMLFAPLGWALRAARDS 525

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                ++   +   + +AF  +    G+AGA +  S+  ++PD    S ++  + +V+LG
Sbjct: 526 ALRADAIGIDVRGVQWAAFVAAGLLAGLAGALYVFSKGSVAPDALGVSRSVDGLVMVLLG 585

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM  L+       +   + +       Y+                 L+   + L++L+  
Sbjct: 586 GMQQLAGPVVGAGVFTWLHDTVARSTDYWRA---------------LLGGIMLLLVLLFP 630

Query: 337 HSLLR 341
             +  
Sbjct: 631 QGISG 635



 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 96/306 (31%), Gaps = 17/306 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL--SIWLLI 96
           + +         + A GLS++ G + +++      Y +G Y    L  R G     W  +
Sbjct: 30  LLNGLAGASTLFLVAAGLSLIFGVMRIVNFAHGSFYMLGLYLAYALVERLGEALGFWPAL 89

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + +  G  G  + +  L+       +  L+ +     ++        G   ++     
Sbjct: 90  LWAPLAVGLLGAAVEVLLLRRIYRAPELLQLLATFALVLVIKDAALWLWGPEELFGPRAP 149

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G                  +  +  +++     +   + L L RT      R    +
Sbjct: 150 GLEGA----------VDLLGRRFPAYDLFLIAVGPLVLVLLTLLLTRTRWGTLVRAATQD 199

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +L     +   S FA+ +   G+ GA                        +V++G
Sbjct: 200 REMVGALGVNQAWLFTSVFALGALLAGLGGALQLPREPA--SLELDMLTIGAAFVVVVVG 257

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM SL     A  ++    EL     +     +   + +F      +  + +  V++ R 
Sbjct: 258 GMGSLPGAFVAALVIA---ELKAVCIWLGVVEVAGVEVAFPQLTLVVEFLVMAAVLIWRP 314

Query: 337 HSLLRL 342
             L+  
Sbjct: 315 WGLMGR 320


>gi|227533082|ref|ZP_03963131.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|227189263|gb|EEI69330.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
          Length = 288

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 97/307 (31%), Gaps = 25/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A G ++V G + L++      Y +GA+      +    S    +  
Sbjct: 4   IINGLSLGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFWGYYAINYLHFSFVPALLS 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++   G+++   + +   +   IA LI +      L        G            
Sbjct: 64  AMVMAALSGVLIEYLAYRPLRNSPRIAALITAIGVSFFLENGMSFLFGAN---------- 113

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I    +    V        +L     L   +   +++T +  A R +  + +
Sbjct: 114 -ARNFPQVITTKTYQILGVDVSNVQLLILFTSLVLMVMLQFIIKQTTMGKAMRAVAVDPE 172

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +           FA+ SA  G AG       + I P M      I      ++GG+
Sbjct: 173 AAQLVGINPDHVISFTFALGSALAGAAGVMIGLYYNSIDPLM-GMVPGIKAFVAAVVGGI 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A    ++  +      +               +      + + L +++++    
Sbjct: 232 GSVPGAAVGGFLIGLLETGVQAVG-------------LSAYKDAAVYLVLIIMLVVLPAG 278

Query: 339 LLRLRTP 345
           L   R  
Sbjct: 279 LFGKRQR 285


>gi|226944691|ref|YP_002799764.1| ABC-transporter permease [Azotobacter vinelandii DJ]
 gi|226719618|gb|ACO78789.1| Bacterial ABC-transporter, permease prtein [Azotobacter vinelandii
           DJ]
          Length = 304

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 85/304 (27%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P+
Sbjct: 9   MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLSAIGLALLASFGLESFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +    + +                   + +   I      +               
Sbjct: 69  LIFGTLLFTVCVTGLYGWVIERIAYRPLRNSTRLAPLISAIGISLILQNYVQISQGARQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+            F+       ++L+      A++   +R T +    R  + ++K
Sbjct: 129 GIPTLLDGAFRLPIGEGFLQISYTKVFILVAAFAGMAALTWVIRCTRLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG     +          F   I   +  +LGG+
Sbjct: 189 MAQILGIDTDRVISWVFVIGAAMAALAGLLITLNYGTFDFYA-GFVIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL        G+    +  +  F               L L+++ R   
Sbjct: 248 GSLPGAMLGGLILGVAEAQFSGIVNTDYKDVFSFS-------------LLVLILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|294633204|ref|ZP_06711763.1| branched-chain amino acid ABC transporter permease [Streptomyces
           sp. e14]
 gi|292830985|gb|EFF89335.1| branched-chain amino acid ABC transporter permease [Streptomyces
           sp. e14]
          Length = 339

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/332 (15%), Positives = 110/332 (33%), Gaps = 13/332 (3%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             ++  +A    L L   L           +    L++   A G  +++G  GLLS    
Sbjct: 1   MLVVLFIAPYSALPLPGLLDGPIGSPGNLQLLALCLVFGALATGYDLLLGRTGLLSFGHA 60

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           + +A GAY    +    GL   L   +  +   A   ++G  SL+  G   ++ TL  ++
Sbjct: 61  LYFAAGAYVTNTVMLEAGLPFALAALLGLLAGVALSALLGAVSLRVSGIGFSMVTLAFAQ 120

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
               ++ +      G      A                       + +   +Y++ L   
Sbjct: 121 AGSILVQRDPGGVTGGEEGRAAPADKMPAA------------LVGIDHTANLYWIALAYL 168

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +  +++ W  R+     W  I++N++    L       KL+AF ++ A   + G  +  
Sbjct: 169 VVVLAVVHWAVRSPTGRVWEGIKENERRVEILGLRPYGFKLTAFVLAGALAALGGIVYLL 228

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                +P        + ++ +V+LGG  +         +          +      + L 
Sbjct: 229 LTGGATPQTTTSDFTLSLLVMVVLGGSGTRWGPMAGGILYTWADHRLGDLANSGAVAGLP 288

Query: 312 FDCSFNMRH-TTLMVIALFLVILMRSHSLLRL 342
                 +     L+      VI +    + RL
Sbjct: 289 AVLRVPLSQPLFLLGALFVAVIYLLPGGMARL 320


>gi|240850651|ref|YP_002972051.1| high-affinity branched-chain amino acid transporter, permease
           protein [Bartonella grahamii as4aup]
 gi|240267774|gb|ACS51362.1| high-affinity branched-chain amino acid transporter, permease
           protein [Bartonella grahamii as4aup]
          Length = 352

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 63/339 (18%), Positives = 116/339 (34%), Gaps = 7/339 (2%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K    +     V  L+ FLF   +    Y   +   I I  + A  L+++ G  G+ S
Sbjct: 1   MAKSVTTVLSCISVLVLIGFLFYADSHFNDYTLRIINLIAINAILAISLNLIYGFTGMFS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      AIGAY   IL          ++ +   I+     +     +      L  A +
Sbjct: 61  LGHAGFMAIGAYVCAILLLSPEQK--EMMWILEPIAEPLYHLQLPFFVAVVISGLCAAVV 118

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +      + +    +     G     R+     T  +                + Y  L
Sbjct: 119 GLLIALPILRLGGDYLGIATLGFAEIIRIVITNATSLTNGSLGIKGIPQNATLWWNYGWL 178

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                    ++     +   N  R IRD++ A  ++     F +  +F V + F G+ GA
Sbjct: 179 AFTVLFIVLLLQ----SNTGNVLRAIRDDEIAAKTMGINAFFYRSFSFTVGAFFAGIGGA 234

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             AA    I P MF F     ++ IV+ GG+ S++     + I+  ++E    +   +  
Sbjct: 235 LMAALISTIDPKMFNFLLTFNILMIVVAGGLGSITGSIIGSIIITVMLEWLRIIESPFDL 294

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
             +            +  + L ++IL     L+  R  S
Sbjct: 295 GFIHIP-ETPGLRMVVFSLLLLVIILFWRKGLMGQREFS 332


>gi|33592400|ref|NP_880044.1| high-affinity branched-chain amino acid transport system, permease
           protein [Bordetella pertussis Tohama I]
 gi|33597488|ref|NP_885131.1| high-affinity branched-chain amino acid transport system, permease
           protein [Bordetella parapertussis 12822]
 gi|33601884|ref|NP_889444.1| high-affinity branched-chain amino acid transport system, permease
           protein [Bordetella bronchiseptica RB50]
 gi|33572045|emb|CAE41572.1| high-affinity branched-chain amino acid transport system, permease
           protein [Bordetella pertussis Tohama I]
 gi|33573916|emb|CAE38232.1| high-affinity branched-chain amino acid transport system, permease
           protein [Bordetella parapertussis]
 gi|33576321|emb|CAE33400.1| high-affinity branched-chain amino acid transport system, permease
           protein [Bordetella bronchiseptica RB50]
 gi|332381816|gb|AEE66663.1| high-affinity branched-chain amino acid transport system, permease
           protein [Bordetella pertussis CS]
          Length = 308

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/311 (15%), Positives = 101/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
             +      IY + A G ++V G +G+++      Y IGAY  ++  +            
Sbjct: 12  FFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGTNSGLPLPF 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            I  ++ V+  ++G  G  +   + +       +  LI +      L  W  +  G    
Sbjct: 72  IIAAMLVVAIFVTGVYGYSVERVAYRPVRGSPRLVALISAIGMSIFLQNWVALGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   V   ++F    S  V        +++    L  ++ L+++ + +  A 
Sbjct: 129 ----RDMAVPALVSGAVQFHMGSSFDVTVPYSRIMIIVVTVVLMVALTLFIKYSRMGRAS 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    +      L           F + +    + G   A +  +++     F   I   
Sbjct: 185 RACSQDMHMANLLGIDTNRVISFTFVLGAMLAAVGGVLIAITIGKLN-PFIGFLAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L              +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAAYISSQYKDIVAF-------------ALLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|110678817|ref|YP_681824.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
 gi|109454933|gb|ABG31138.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
          Length = 341

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/335 (14%), Positives = 119/335 (35%), Gaps = 9/335 (2%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +L    +   L+L   L    + KY   +     + ++   GL + +G+  L +L+
Sbjct: 7   QKRGVLGACMLAAILILIGVLATFFASKYQLRLIYSAYVNLIVVLGLQVFMGNSRLTNLS 66

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 IGAY+  I  +   +    L      ++      +    +           +  
Sbjct: 67  HSAFMGIGAYAAAISVTPVAMKQISLPDAPWGLNAFALDPLTSAIVAL--------LITG 118

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +  F   +   +    G     +A  +      +     F    + F I ++F    ++ 
Sbjct: 119 AIAFLVGIFIVRMTGTGATIATLAILVIVHSIFLYRTDIFKGNQAFFGIPQVFSLTSIVI 178

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  +   I+   R +      R   D++    ++   ++  +L A+ +S   +  AG  +
Sbjct: 179 LAVVVVFIVRGFRESPWGVMLRASADDETGSAAMGVNVVRLRLIAWVLSGLILAGAGIAY 238

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A     IS   F F+   + ++++I GGM +++     T  +   +E+   +        
Sbjct: 239 AYFLGTISARPFYFNHVFLTLAMLIFGGMRTVTGAVLGTFAISFGLEVVRWLETGPVIVG 298

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           + F     +    ++ + + L + +R   ++  R 
Sbjct: 299 IDFPEVLGLSG-VMLGLVIVLTMALRPVGVMGDRE 332


>gi|226305053|ref|YP_002765011.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226184168|dbj|BAH32272.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 342

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 64/323 (19%), Positives = 119/323 (36%), Gaps = 30/323 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A++  +++   L       Y   +      Y + A G+ +     G LS+      AIGA
Sbjct: 31  ALITVVVVAAVLLWMGPSLYRQDLVFLAATYSLIALGMYVPFVLAGSLSMAYSAYAAIGA 90

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  ++  R GLS+W    + A+ + A  +++ L + K  G YLA  TL+    F++ LI
Sbjct: 91  YAVALISVRTGLSMWWGWILGALAAAAVAVLLSLATQKLSGFYLAAVTLLFGIAFEHWLI 150

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                T G AGI   + +                   +      +    +    L A  +
Sbjct: 151 DGPSFTGGSAGISGVETVTMF---------------GWEPPRYALVVFAILFVCLIAVAV 195

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             LR++      +  RDN+    S         + A A+ +A     G+ F  S   ++P
Sbjct: 196 DRLRKSVWGLMLQAARDNRNVARSSGVNPAHLTVVALAIGAAIASTGGSLFTVSVQAVTP 255

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F  S   + I + I+GG  S         I++ V     G                  
Sbjct: 256 ETFTLSIVFLAIFMPIIGGRGSAWGAPLGALIVVIVTLNMPGYQGSGE------------ 303

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
               L+  A+ +++++    ++ 
Sbjct: 304 ---LLLAGAVLVILIVAPGGVIG 323


>gi|126738982|ref|ZP_01754678.1| ABC transporter permease protein [Roseobacter sp. SK209-2-6]
 gi|126720163|gb|EBA16870.1| ABC transporter permease protein [Roseobacter sp. SK209-2-6]
          Length = 330

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 57/315 (18%), Positives = 110/315 (34%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L   A++  LL    L     + ++ ++  ++ I  +   GL+I +G  GL+SL     +
Sbjct: 9   LINAALLASLLGVPLLAWQMDEPFVITLATKVAILALAGVGLNIALGLGGLVSLGHAAFF 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IG Y+  IL +       L              ++ L ++        +   +      
Sbjct: 69  GIGGYAMGILAAHAQNYEPLFTWPFLFEGSNQMPLIWLVAVVASALAALVIGALSLRTSG 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              I            +      + G    S+      P    +  I  + +   +  ++
Sbjct: 129 VYFIMITLAFGQMLYYFAISWSAYGGEDGLSIWVRNEMPGLNTLDPIQFFAIAFAVLAMA 188

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L R+    A    R   +   ++  T    +L AF +S A  G+AGA FA    
Sbjct: 189 LWFSARLARSPFGLALSASRQTAERVETVGLTPFKLRLVAFVISGAITGLAGALFADLNR 248

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            +SP M  +  +  ++  VILGG+  L       A+ I +  L  G++ Y+   L     
Sbjct: 249 FVSPTMLSWHTSGEIMIFVILGGVGRLYAPLLGAAVYILLEHLLGGISEYWQIFLGLLLL 308

Query: 315 SFNMRHTTLMVIALF 329
              +     ++  + 
Sbjct: 309 IMVLFAKGGLIGLIA 323


>gi|118587880|ref|ZP_01545290.1| ABC transporter permease protein [Stappia aggregata IAM 12614]
 gi|118439502|gb|EAV46133.1| ABC transporter permease protein [Stappia aggregata IAM 12614]
          Length = 327

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/288 (17%), Positives = 102/288 (35%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
              +   +   F   T  + +  ++  + +++ + A GL+I +G  GL+SL   + + +G
Sbjct: 9   ALTLALFVAIPFWAITADEPFTITLMTRAVVFAIAAVGLNIALGLGGLVSLGHAVFFGLG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  IL         L      +       ++ L ++        +  ++         
Sbjct: 69  GYAMGILAYHAQNYTPLTEWPFLIEGTKSMPLIWLVAVIVSSLAALVIGILSLRTAGVYF 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I            +      + G    S+     FP    +  I  Y + LG+  L    
Sbjct: 129 IMITLAFGQMFFFFAISWAEYGGEDGLSIYVRNGFPGLNTLDPIQFYGLCLGLLCLVLLF 188

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L  +    A    R       +     +  KL AF VS A  G+AGA FA     +S
Sbjct: 189 AWRLSGSPFGLALNAARQVPVRVETAGLDPVRLKLVAFVVSGAITGLAGALFADLNRFVS 248

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           P MF +  +  ++  +I+GG+  L        + + +      ++ ++
Sbjct: 249 PTMFSWQTSGEIMIFIIIGGVGRLFGPVVGALVFVALEHWLGALSDFW 296


>gi|86609462|ref|YP_478224.1| urea ABC transporter, permease protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86558004|gb|ABD02961.1| urea ABC transporter, permease protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 402

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/315 (15%), Positives = 96/315 (30%), Gaps = 21/315 (6%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           +    +     ++  +L  +F+  T    +  ++  + L   + A G+ ++ G  G+LSL
Sbjct: 45  SSRKLLWEAGILIVLVLALIFVAPTVLSGFRLNLLGRFLALSIVALGIDLIWGYTGMLSL 104

Query: 69  NCVIAYAIGAYSYVIL-----------------GSRYGLSIWLLIPVSAMISGACGMIMG 111
              + +A+G Y+  +                  G       W         + A  +I  
Sbjct: 105 GHGVFFALGGYALGMHLKLQLPEGQIPEFFSLYGVTELPWFWYPFYSFPFTAVAVVLIPA 164

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           L +       +      +                         RL      + +    F 
Sbjct: 165 LVAAALGYLVVRNRIRGVYFSILTQATTIIFF----NFFNGQQRLINGTNGLTNFQTLFG 220

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
              +       +Y   +    L+  +  WL           IRD++             K
Sbjct: 221 LDVNSSEMRFAVYVTTVLAVVLAYLLCRWLTSGLFGRILVAIRDDEPRVRFSGYDPTGFK 280

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           +  FAVS+A  G+AGA F      ISP+      +I ++  V +GG  SL        ++
Sbjct: 281 VLVFAVSAALAGIAGALFTLQTGIISPNAMAVPFSIEMVIWVAVGGRASLVGAVLGALLV 340

Query: 292 IGVVELCCGMNFYYF 306
                L        +
Sbjct: 341 NFAKSLLSENLPEIW 355


>gi|312111253|ref|YP_003989569.1| urea ABC transporter permease UrtC [Geobacillus sp. Y4.1MC1]
 gi|311216354|gb|ADP74958.1| urea ABC transporter, permease protein UrtC [Geobacillus sp.
           Y4.1MC1]
          Length = 357

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 56/335 (16%), Positives = 106/335 (31%), Gaps = 27/335 (8%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           + +   L LF       ++  S+  + L + M A GLS++ G  G+LSL   + + +GAY
Sbjct: 7   LYWLFFLALFAAPFYLTEFRLSLLGKFLCFAMIAIGLSLLWGHTGILSLGHGVYFGLGAY 66

Query: 80  SYVILG---SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
              +     S  G     +                 P        +    L     +   
Sbjct: 67  CMAMYLKLESAPGRLPDFMEWSGVNKLPWFWKPFEHPLFAMSAAIVIPVLLAAFLSYFTF 126

Query: 137 LIKWKPITNGKAGIYVA----------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
             + K +        V                    + +    F F  S  + +I +Y++
Sbjct: 127 KNRIKGVYFSLLSQAVVVVFVTLFIGKQEWTGGTNGLTNFSTVFGFSLSSPLTQIVLYWI 186

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            + +  L      WL  +        IRD +     L       K+  +++S+AF  +AG
Sbjct: 187 TVCLLLLIFLFSRWLTVSRFGRVLVAIRDGENRVRFLGFNPTTYKVFVYSLSAAFAALAG 246

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             F      ISP M     +I ++  V +GG +SL        +                
Sbjct: 247 IMFVLQVGLISPAMMGIIPSIEMVLWVAVGGRSSLIGAVIGAIV--------------TN 292

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           ++   F  ++       +      V++   + L  
Sbjct: 293 SAKSFFSENYPDIWLLFLGGLFIGVVMFLPNGLAG 327


>gi|254705580|ref|ZP_05167408.1| hypothetical protein BpinM_00781 [Brucella pinnipedialis
           M163/99/10]
          Length = 324

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 130/337 (38%), Gaps = 33/337 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +   L+  +         +     +++L + +FA   ++++G  G+LS      +
Sbjct: 18  LSAIVLGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 73

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              AY        +G+S  L + +  + + A G+++G  +++ +G Y  + TL ++++F 
Sbjct: 74  GGAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 133

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              ++                       ++ + R F F    +   + MYY +L +  L 
Sbjct: 134 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 179

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              I  +  +      +++R+N+    SL  ++   KL+AF +S+   G+AG   A    
Sbjct: 180 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 239

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             +     +  +  VI + +LGG+ +L       A ++ +       +F           
Sbjct: 240 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 290

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 T +  +     +L+    ++     S   ++
Sbjct: 291 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 321


>gi|226305047|ref|YP_002765005.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226184162|dbj|BAH32266.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 368

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 55/350 (15%), Positives = 106/350 (30%), Gaps = 20/350 (5%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           MSI +    +      L A+V   +    L       +  S+  + L + + A G+ +  
Sbjct: 1   MSILNNSRIRVWGGFALAAIVLFAIAPAVL-----SDFRLSLLAKFLCFAIVAVGIGLAW 55

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI---------------WLLIPVSAMISGA 105
           G  G+L+L   + + IGAY   +        +                L        S  
Sbjct: 56  GRGGMLTLGQGVFFGIGAYVMAMHLKIADAELKGDAVPDFMSIAGKTELPGYWQPFASPF 115

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
             +   L         L +             I  + +    A + +  +       +  
Sbjct: 116 VAIFAILFLPGAVAFLLGLGVFKRRVKGAYFAILSQALAAAFAILLIGQQSIGGSNGLNR 175

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
              FF F  +    +  ++++  G+   S ++I  L  +        +RD ++    L  
Sbjct: 176 FRTFFGFNLNDPANKQMLFFIAAGVLLASVALIRQLMNSRYGELLVAVRDQEERVRFLGY 235

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                KL A+  ++   G+AGA F      ISP       +I  +  V +GG  +L    
Sbjct: 236 DPANIKLVAYVTAAFLAGIAGALFVPIVGIISPADVGIVPSIAFLIGVAIGGRATLLGPV 295

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
                +              +           +      V  LF ++  R
Sbjct: 296 LGAIGVAWAQSTFSEKLPSGWIYAQGLMFIVVVGFFPAGVAGLFALMRHR 345


>gi|169831550|ref|YP_001717532.1| inner-membrane translocator [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638394|gb|ACA59900.1| inner-membrane translocator [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 294

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 97/307 (31%), Gaps = 23/307 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+Y + A G ++V G + L++      + +GA+      + + +   L I V
Sbjct: 8   VINGLQLGLVYALIALGYTMVYGIVRLINFAHGEVFMVGAFVGYFGFTNWNMPWPLAILV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I    GM +   + +       I  LI +      +  +           +      
Sbjct: 68  AMIICACLGMTIERLAYRPLRYAPRIMALIAAIGVSFFIAHF---------CSLKFMFGP 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V+       +    V        + + +  +   +   + RT +  A RT+  +  
Sbjct: 119 NYRVVQRPFEEVYWSIGGVTISNIQLLIFVTVVIMLLGLQYLVYRTRLGAAMRTLSYDHD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + +A   + G  +A +  +I          +   +  +LGG+
Sbjct: 179 TARLMGVNVDRTISLTFGIGAALAAVGGVLYAIAYPQI-FTFMGIMPGLKAFTAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        I+     +           ++ F               L LV+L++   
Sbjct: 238 GLIPGAMLGALIMGQAEVMTAAFISSQLRDMIAFS-------------ILILVLLIKPTG 284

Query: 339 LLRLRTP 345
           +L    P
Sbjct: 285 ILGKTQP 291


>gi|254250989|ref|ZP_04944307.1| inner-membrane translocator [Burkholderia dolosa AUO158]
 gi|124893598|gb|EAY67478.1| inner-membrane translocator [Burkholderia dolosa AUO158]
          Length = 323

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 58/324 (17%), Positives = 133/324 (41%), Gaps = 16/324 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+Y +LL   L A     Y   +  ++L + +FA   ++++G  GLLS    +  A   Y
Sbjct: 5   VLYGVLLAALLVAPFIGAYPVFVM-KVLTFALFAAAFNLLIGYTGLLSFGHAMFLATAGY 63

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                    G +  L +    + +   G+++GL +++ +G Y A+ TL  +++   I ++
Sbjct: 64  VTGYSIQTLGATPELGVLAGTVAATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQ 123

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                                  ++ + R   F    +  ++ +YYV+L +   + + I+
Sbjct: 124 A--------------PFTHGEDGLQGVPRGRLFGIVDLSNDVALYYVVLAVIVAACAFIV 169

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +        I++N+    SL       KL AF +S+A  G+AGA         +  
Sbjct: 170 RIVHSPFGQVLVAIKENEARAISLGYDTDRFKLLAFILSAALAGLAGALKVVVLGFETLS 229

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318
              ++ + +V+ + ++GGM +L       A+++ + +    +  +  + + + +  S   
Sbjct: 230 DAYWTMSGLVVLMTLVGGMGTLFGPLLGAALIVALEDRLGDIGEWLASTTGIGWFHSLGE 289

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
             T +  +     +L     ++  
Sbjct: 290 SATIVTGLIFIACVLAFRRGIVGE 313


>gi|116493834|ref|YP_805568.1| branched chain amino acid ABC transporter permease [Lactobacillus
           casei ATCC 334]
 gi|191637084|ref|YP_001986250.1| Branched-chain amino acid ABC transporter, permease protein
           [Lactobacillus casei BL23]
 gi|239629297|ref|ZP_04672328.1| branched-chain amino acid ABC-type transport system protein
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|301065410|ref|YP_003787433.1| branched-chain amino acid ABC transporter permease [Lactobacillus
           casei str. Zhang]
 gi|116103984|gb|ABJ69126.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Lactobacillus casei ATCC 334]
 gi|190711386|emb|CAQ65392.1| Branched-chain amino acid ABC transporter, permease protein
           [Lactobacillus casei BL23]
 gi|239527983|gb|EEQ66984.1| branched-chain amino acid ABC-type transport system protein
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|300437817|gb|ADK17583.1| Branched-chain amino acid ABC-type transport system, permease
           component [Lactobacillus casei str. Zhang]
 gi|327381114|gb|AEA52590.1| Amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Lactobacillus casei LC2W]
 gi|327384289|gb|AEA55763.1| Amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Lactobacillus casei BD-II]
          Length = 292

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 97/307 (31%), Gaps = 25/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A G ++V G + L++      Y +GA+      +    S    +  
Sbjct: 8   IINGLSLGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFWGYYAINYLHFSFVPALLS 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++   G+++   + +   +   IA LI +      L        G            
Sbjct: 68  AMVMAALSGVLIEYLAYRPLRNSPRIAALITAIGVSFFLENGMSFLFGAN---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I    +    V        +L     L   +   +++T +  A R +  + +
Sbjct: 118 -ARNFPQVITTKTYQILGVDVSNVQLLILFTSLVLMVMLQFIIKQTTMGKAMRAVAVDPE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +           FA+ SA  G AG       + I P M      I      ++GG+
Sbjct: 177 AAQLVGINPDHVISFTFALGSALAGAAGVMIGLYYNSIDPLM-GMVPGIKAFVAAVVGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A    ++  +      +               +      + + L +++++    
Sbjct: 236 GSVPGAAVGGFLIGLLETGVQAVG-------------LSAYKDAAVYLVLIIMLVVLPAG 282

Query: 339 LLRLRTP 345
           L   R  
Sbjct: 283 LFGKRQR 289


>gi|83644113|ref|YP_432548.1| branched chain amino acid ABC transporter permease [Hahella
           chejuensis KCTC 2396]
 gi|83632156|gb|ABC28123.1| Branched-chain amino acid ABC-type transport system, permease
           components [Hahella chejuensis KCTC 2396]
          Length = 308

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 90/304 (29%), Gaps = 15/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG Y   +  S   +     +P+
Sbjct: 12  LINGITIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGTYVAFMAISGMAMLGVEFLPL 71

Query: 99  SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             +++    M++                      I     I           +    R  
Sbjct: 72  IFLVALLSSMLVSSSFGWAIERIAYRPLRGGNRLIPLISAIGMSIFLQSYVRLGQGSRDI 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            + + +     F                + +        + L++ R+ +  A R +  + 
Sbjct: 132 AMSSQISGGWSFGPEDGFQTSLSYIQVLIFIVTVISMTVLTLFISRSRMGRACRAVAQDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L         S F + +A   +AG         ++  M  F   +   +  +LGG
Sbjct: 192 KMANLLGIDTNRVIASTFVIGAALAAVAGTLLGMYYGVVNV-MVGFIAGLKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     +        +  ++ F               L L++L +  
Sbjct: 251 IGSIPGAMLGGIILGITESMTAAYFSTEYKDVVSF-------------ALLVLILLFKPT 297

Query: 338 SLLR 341
            LL 
Sbjct: 298 GLLG 301


>gi|309781988|ref|ZP_07676718.1| ABC transporter, permease/ATP-binding protein [Ralstonia sp.
           5_7_47FAA]
 gi|308919054|gb|EFP64721.1| ABC transporter, permease/ATP-binding protein [Ralstonia sp.
           5_7_47FAA]
          Length = 444

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 49/338 (14%), Positives = 113/338 (33%), Gaps = 8/338 (2%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M    + L ++      +      L+ + L     Q +  ++  Q+ I ++FA   ++++
Sbjct: 24  MKFKPVNLARW------MLWGTTALVMIVLPLIWPQGFAITLLSQMGIMIIFALSYNMLL 77

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G+LS    +   +GA+  V + ++ G      + +   ++ A   I G       G 
Sbjct: 78  GQSGMLSFGHAVYAGLGAFMAVHVLNKIGAM--QALGMGGPLAVALLPIAGGLGGALFGV 135

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
                T   S     ++          + +   D     G    +               
Sbjct: 136 IFGYVTTKKSGTTFAMITLGIGEMVFASALMFPDFFGGEGGVSTNRSIGDALLGVTFGPA 195

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             +YY++   C +S +++    +T +      +RDN +    +       +     +S+ 
Sbjct: 196 RQVYYLIAAWCLISMALMYAWTQTPLGRIANAVRDNPERVEFIGYNTQRVRFLVVILSAF 255

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           F G+AGA    + + ++ +      +  V+    +GGM S         + +       G
Sbjct: 256 FAGIAGALSCINFEIVTAENVSAVRSGSVLLAAFIGGMGSFFGPIIGAVLTVFFTVALSG 315

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +   +   L  F     M     +   L + + +    
Sbjct: 316 ITKAWLLYLGLFFVLMVMYAPGGIASLLVIHLPILRRG 353


>gi|192289960|ref|YP_001990565.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|192283709|gb|ACF00090.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 312

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 60/323 (18%), Positives = 122/323 (37%), Gaps = 34/323 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++    L +   AT  Q +     I + I+ + A  + +  G  G+LS+      +IGA
Sbjct: 11  LLILIGALVVVTIATWGQPFWLDNSIIVAIFALMALSVGLAYGQAGVLSMATGAFASIGA 70

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           +   I+ +R GLS ++ + V+ ++       +    L+     L++ATL++S + +  + 
Sbjct: 71  FGTGIVTTRLGLSPYVGLVVALVVPPVLAWPLARAVLRLSPLPLSVATLLVSLVLEIAVR 130

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +   +T G  G+    RL                  S       M+++  G   ++  + 
Sbjct: 131 EGGDVTGGYIGLSGIPRL------------------SVAPSPQAMHFLAWGCVLVALLLY 172

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L  +AI  A RT R +     +    +     S FA S+A  G+AG  +A     + P
Sbjct: 173 INLMDSAIGRAVRTARHDALRATADGVGVPRLLSSVFASSAAIAGLAGWLYAHHLTYVGP 232

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           D      +I V+ + ++GG  +        A                   L+        
Sbjct: 233 DSMTTHMSIQVLLMAVVGGARTFLGPVVGAA----------------LLLLVTLFLPGAE 276

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
               +    L  V+++  + ++ 
Sbjct: 277 TQGMVFGAMLVFVLVVMPNGIVG 299


>gi|62317218|ref|YP_223071.1| branched-chain amino acid ABC transporter permease [Brucella
           abortus bv. 1 str. 9-941]
 gi|83269200|ref|YP_418491.1| inner-membrane translocator [Brucella melitensis biovar Abortus
           2308]
 gi|189022481|ref|YP_001932222.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus S19]
 gi|237816779|ref|ZP_04595771.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus str. 2308 A]
 gi|254690724|ref|ZP_05153978.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus bv. 6 str. 870]
 gi|254695971|ref|ZP_05157799.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus bv. 3 str. Tulya]
 gi|254700157|ref|ZP_05161985.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella suis bv. 5 str. 513]
 gi|254731949|ref|ZP_05190527.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus bv. 4 str. 292]
 gi|256255906|ref|ZP_05461442.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus bv. 9 str. C68]
 gi|260544455|ref|ZP_05820276.1| branched-chain amino acid ABC transporter [Brucella abortus NCTC
           8038]
 gi|260756296|ref|ZP_05868644.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870]
 gi|260759723|ref|ZP_05872071.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292]
 gi|260882119|ref|ZP_05893733.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68]
 gi|261216401|ref|ZP_05930682.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya]
 gi|261750650|ref|ZP_05994359.1| inner-membrane translocator [Brucella suis bv. 5 str. 513]
 gi|297249267|ref|ZP_06932968.1| branched-chain amino acid transport system permease [Brucella
           abortus bv. 5 str. B3196]
 gi|62197411|gb|AAX75710.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|82939474|emb|CAJ12444.1| Bacterial inner-membrane translocator:Sodium:dicarboxylate
           symporter:Blood group Rhesus C/E and D polypeptide
           [Brucella melitensis biovar Abortus 2308]
 gi|189021055|gb|ACD73776.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus S19]
 gi|237787592|gb|EEP61808.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus str. 2308 A]
 gi|260097726|gb|EEW81600.1| branched-chain amino acid ABC transporter [Brucella abortus NCTC
           8038]
 gi|260670041|gb|EEX56981.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292]
 gi|260676404|gb|EEX63225.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870]
 gi|260871647|gb|EEX78716.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68]
 gi|260918008|gb|EEX84869.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya]
 gi|261740403|gb|EEY28329.1| inner-membrane translocator [Brucella suis bv. 5 str. 513]
 gi|297173136|gb|EFH32500.1| branched-chain amino acid transport system permease [Brucella
           abortus bv. 5 str. B3196]
          Length = 327

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 130/337 (38%), Gaps = 33/337 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +   L+  +         +     +++L + +FA   ++++G  G+LS      +
Sbjct: 21  LSAIVLGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 76

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              AY        +G+S  L + +  + + A G+++G  +++ +G Y  + TL ++++F 
Sbjct: 77  GGAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 136

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              ++                       ++ + R F F    +   + MYY +L +  L 
Sbjct: 137 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 182

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              I  +  +      +++R+N+    SL  ++   KL+AF +S+   G+AG   A    
Sbjct: 183 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 242

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             +     +  +  VI + +LGG+ +L       A ++ +       +F           
Sbjct: 243 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 293

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 T +  +     +L+    ++     S   ++
Sbjct: 294 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 324


>gi|327438227|dbj|BAK14592.1| branched-chain amino acid ABC-type transport system, permease
           component [Solibacillus silvestris StLB046]
          Length = 291

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 99/288 (34%), Gaps = 12/288 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      + +GA+      +R+ ++++L + +
Sbjct: 7   LVNGISLGSIYALIALGYTMVYGIIKLINFAHGDVFMLGAFIGFYAIARWEMNVFLALII 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G+I+   + K   +   IA LI +     ++        G +          
Sbjct: 67  AMILCAVIGVIIERVAYKRLRNATRIAALITAIGVSLLIEYTVIFFRGPSPEAYP----- 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S+                  ++L    FL   +   + +T I  A R +  +  
Sbjct: 122 ------SVFATKNIEIFGAQISTLAIFILSVSIFLMILLQFIVHKTKIGKAMRAVSHDAD 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +     + FA+ SA  G AG  F     RI P M      I      +LGG+
Sbjct: 176 AARLMGINVDNTISATFAIGSALAGAAGVIFGIYYTRIDPLM-GIMPGIKAFIAAVLGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             +        +L  V  +   + +  +     F     +       I
Sbjct: 235 GIIPGAMVGGLVLGVVETVVSALGYSLWRDAAAFVILILILILRPAGI 282


>gi|330807293|ref|YP_004351755.1| amino acid ABC transporter permease [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327375401|gb|AEA66751.1| Putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 498

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++   +       I    +I+      +       
Sbjct: 225 ITFGLLGVINMAHGEMLMLGAYSTYVVQMLFQRFAPNAIEFYPLIALPVAFFITAAIGMA 284

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      +     + +         +
Sbjct: 285 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRLVFGAQNVEVANPAWLSGGIQVLPNL 342

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 343 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRVDMLAFGL 402

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 403 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVFAAFGLGIANKI 460

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 461 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 495


>gi|288572908|ref|ZP_06391265.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288568649|gb|EFC90206.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 297

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/305 (17%), Positives = 102/305 (33%), Gaps = 22/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      +Y + A G ++V G L L++      + +GAY     GS + L   +   +
Sbjct: 10  FFNALTLGSLYALIAIGYTMVYGILRLINFAHGEIFMLGAYFIFYTGSLFNLPWVVGAVI 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++   CG+++   + K   D   I+ LI S     ++     +        V    +F
Sbjct: 70  SIVLCALCGIMVDKVAYKPLRDAPRISALISSIGMSFLIQNLAIVVFSGIPKPVVRPDFF 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   V             V        V +    L   ++  + +T    A R I  + +
Sbjct: 130 VKIMV----------IKGVRILPLAVIVPVVCFVLVLGLLFIVYKTKPGLAMRAISKDIE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +  ++       F + SA    +G  +A    +I P M  F   I      ++GG+
Sbjct: 180 TTRLMGVSVNRIIALTFGLGSALAAASGIMWALRYPQIQPLM-GFMPGIKAFIAAVVGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL  V  +              F             I L +++L +   
Sbjct: 239 GSIHGAVIGGLILGFVEIMTVAFFPELSGFKDAFA-----------FILLIVILLAKPTG 287

Query: 339 LLRLR 343
           L+  +
Sbjct: 288 LMGEK 292


>gi|217959438|ref|YP_002337988.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus AH187]
 gi|222095581|ref|YP_002529638.1| branched chain amino acid ABC transporter , permease [Bacillus
           cereus Q1]
 gi|229138662|ref|ZP_04267244.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus BDRD-ST26]
 gi|217066953|gb|ACJ81203.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus AH187]
 gi|221239639|gb|ACM12349.1| branched chain amino acid ABC transporter, permease [Bacillus
           cereus Q1]
 gi|228644781|gb|EEL01031.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus BDRD-ST26]
          Length = 333

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 59/325 (18%), Positives = 127/325 (39%), Gaps = 31/325 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 15  VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  R      +  + +  +  IS     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 75  VALLFDRQGVSITNFLIGLVAAIFISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YYV L    +   +
Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L  +    
Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
            R T ++ +   +V+L+    L+  
Sbjct: 287 ERWTIILGVLYIIVLLVFPKGLVGT 311


>gi|152981595|ref|YP_001351787.1| ABC-type branched-chain amino acid transport system, permease
           component [Janthinobacterium sp. Marseille]
 gi|151281672|gb|ABR90082.1| ABC-type branched-chain amino acid transport system, permease
           component [Janthinobacterium sp. Marseille]
          Length = 343

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 106/324 (32%), Gaps = 22/324 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L     ++  L +      +Y  ++ I    Y +   G +++ G  GLLS    +  AIG
Sbjct: 30  LIAGGVVVALLAIAPLFVSQYYMTLLIPFFAYAVILLGFNLLFGYGGLLSFGHALFIAIG 89

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+   + ++ G+  + ++ ++A+++     I                  +   +  +  
Sbjct: 90  AYAAAAMVAKTGMISFEMMLLTAVVASFIISIPIAWLASRFTGIFFGMLTLSFGMLFHSF 149

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +       G        R    G  +    +               YY  L M  L   +
Sbjct: 150 LNKFYYITGGDSGMRVPRPSLFGMELDQFDK-------TAFLGGPFYYYCLVMVLLLTWV 202

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  + R+         RDN      L   I   +  AF VS+ +  + G     +     
Sbjct: 203 MWRIVRSPYGIHLMASRDNAIKALYLGVKIRSVRAIAFVVSAVYASIGGVILGVNTGLAD 262

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P++  ++ +  ++ + +LGG            + I + +    +  Y+            
Sbjct: 263 PELAYWTHSGHLVFMAVLGGYQEFLGPVLGAFVFILLQDELSSLTQYW------------ 310

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                 +   L +++++    ++ 
Sbjct: 311 ---RFFLGAILAILVVVLPGGIMG 331


>gi|30911169|gb|AAP41937.1| BraD [Rhizobium leguminosarum bv. trifolii]
          Length = 313

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 95/304 (31%), Gaps = 17/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G +G+++      + +G ++ +I+          L   
Sbjct: 21  LLNGLTLGSIYGLVAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFFVLTSIFAGLPVA 80

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +++     ++      +  + +A   L  S     ++            I V      
Sbjct: 81  VLLLAMLVVAMLMTSLWNWTIERVAYRPLRGSFRLAPLITAIGMSITLSNFIQVTQGPRN 140

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +    +    +   +    +++    L       + RTA+  A R    ++K
Sbjct: 141 KPI---PPMVSSVYQFGNISVSLKQIIIIVITAVLLTIFWYIVNRTALGRAQRATEQDRK 197

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       F + +A   +AG  +       S +   F+  +   +  +LGG+
Sbjct: 198 MAALLGVNVDQTISITFVMGAALAAVAGTMYLMYYGVASFND-GFTPGVKAFTAAVLGGI 256

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        ++  +  L        +  +  F               L  V++ +   
Sbjct: 257 GSLPGAVFGGLLIGLIESLWSAYFTIAYKDVATF-------------AILAFVLIFKPTG 303

Query: 339 LLRL 342
           +L  
Sbjct: 304 ILGR 307


>gi|170780971|ref|YP_001709303.1| putative integral membrane transport protein [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|169155539|emb|CAQ00651.1| putative integral membrane transport protein [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 466

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 97/290 (33%), Gaps = 27/290 (9%)

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSL- 115
           S++ G+ GL +         GA    +  +  GL+  L I ++ ++ GA G +       
Sbjct: 201 SLIYGTTGLNNFAHGELVTFGALMAYLFSNVLGLNPVLAIIITVVLGGAFGFVQDAAIWK 260

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
             R   L +  L++  I  ++ +++       A              V  +   F     
Sbjct: 261 PLRRRRLGLVPLMIVTIGLSLALRYTFQFIFGADRLTLPNSSAPFLVVGPVSLKFTDVVG 320

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
            ++  + +            ++   L  T I  A R + DN+    +    +       +
Sbjct: 321 AIVSIVLL-----------VAVAYVLLYTKIGKATRAVSDNRSLAAASGIDVEGVIRVVW 369

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
              +A   ++G F A  +          S  ++V S V+LGG+ +       + ++   +
Sbjct: 370 IGGAALAALSGVFIAYYQSL--RWDTGASILLLVFSAVVLGGLGTAFGALIGSIVIGVFI 427

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
            +   +                       ++ + +++L+R   +L  +  
Sbjct: 428 NVSTMVLP-------------ENMKYVAALVVMIVILLVRPQGILGRKDR 464


>gi|167895524|ref|ZP_02482926.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 7894]
 gi|167912170|ref|ZP_02499261.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 112]
          Length = 330

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/330 (13%), Positives = 88/330 (26%), Gaps = 32/330 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------ 84
            A     Y  ++  +++ Y + A  L +V G  G+LSL   + +A+G Y+  +       
Sbjct: 4   SAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLFFALGGYAIGMYLMRAIG 63

Query: 85  ------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
                                               ++ L        +         + 
Sbjct: 64  RDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPAALAWVFGFFTFRSRVKG 123

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
               +I            Y  +  +          R   F  +       +         
Sbjct: 124 VYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAITSPGTRTVLLLTTFAALV 183

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            S      +  + +      IRD +     L  + +  KL  + VS+    +AGA +   
Sbjct: 184 ASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVWVVSAVLCAIAGALYVPQ 243

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              I+P       +I +   V +GG  +L         + G   +               
Sbjct: 244 VGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAKSVFTAY----------- 292

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              F       + +   LV L+    ++ L
Sbjct: 293 ---FAEYWLFFLGLIFVLVPLVLPRGIMGL 319


>gi|119900108|ref|YP_935321.1| putative branched-chain amino acid transport permease [Azoarcus sp.
           BH72]
 gi|119672521|emb|CAL96435.1| putative branched-chain amino acid transport permease [Azoarcus sp.
           BH72]
          Length = 315

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 70/315 (22%), Positives = 124/315 (39%), Gaps = 20/315 (6%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
           F  A+ S  Y       ++ Y +   GL IVVG  G ++L      A+GAY+  +L +R 
Sbjct: 21  FGYASASPDYALGQATLVITYAIAGLGLVIVVGHGGQIALGHGALVALGAYTQALLVARG 80

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
              + L +P++    GA G +  LP+ +  G Y  I+TL  + + +  L++W+ +T G A
Sbjct: 81  LPPL-LALPLAMAAGGAGGALASLPARRLGGLYFGISTLAFALLVEEALVRWESLTRGSA 139

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G+ VA                                V   +  L+ +    L  + I  
Sbjct: 140 GLGVAAFSVGGW---------------SATAPAAQLGVSAVLLALAWAGCRRLLASRIGR 184

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           AWR +R+++ A  +       +   AF    A  G+ GA +A     +SP+ F    +  
Sbjct: 185 AWRALREDEMAAQACGIAAGPSIALAFTAGGALAGLGGALYAHWIGYLSPEQFGLRFSFE 244

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           ++ +V +GG   L+       +++ + +L            L          T L    +
Sbjct: 245 LLMLVFIGGARRLAGALWGALVIVALPQLIALARDALPGDTL----RSAGVETLLFGALI 300

Query: 329 FLVILMRSHSLLRLR 343
              +L+R   L   R
Sbjct: 301 VAAVLLRPQGLAGGR 315


>gi|66047654|ref|YP_237495.1| inner-membrane translocator [Pseudomonas syringae pv. syringae
           B728a]
 gi|63258361|gb|AAY39457.1| inner-membrane translocator [Pseudomonas syringae pv. syringae
           B728a]
          Length = 529

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 315

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 491

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526


>gi|33596807|ref|NP_884450.1| ABC transporter [Bordetella parapertussis 12822]
 gi|33600579|ref|NP_888139.1| ABC transporter [Bordetella bronchiseptica RB50]
 gi|33568178|emb|CAE32091.1| Putative ABC transport system, membrane protein [Bordetella
           bronchiseptica RB50]
 gi|33573508|emb|CAE37497.1| Putative ABC transport system, membrane protein [Bordetella
           parapertussis]
          Length = 333

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 119/279 (42%), Gaps = 13/279 (4%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y   +  +ILI+ +FA  L+++VG  GL+SL     + +  Y+ + LG   G+S W  
Sbjct: 24  SDYTLGLISEILIFAIFAMSLNLLVGYTGLMSLGHAAFFGMSTYTVIALGVHLGISGWWG 83

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           I     ++ A   ++G+  ++  G    + T+  S++     +KW+ ++ G  G+    R
Sbjct: 84  ILAGVAMATALAAVIGVFCIRVSGIPFLMLTMAFSQLLYAASLKWRSLSGGSDGLVGFVR 143

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
               G ++           +     + ++   L              R+ + + +  IRD
Sbjct: 144 PALFGVSLSESAVARYAVVAVGFALVLVFLWCLV-------------RSPLGSIFIGIRD 190

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N++   ++   +   KL +F ++    G+AGA +A     +S D+  +  +  V+ ++IL
Sbjct: 191 NEQRMRAIGYPVQRFKLLSFIIAGFLAGVAGALYALFNAYVSTDILHWHLSGDVMIMMIL 250

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           GG  ++   A   A+ + +       N Y+   +     
Sbjct: 251 GGSGTVLGPAIGAALFLLLKNFIGSYNDYWSFWVGAVFI 289


>gi|222833000|gb|EEE71477.1| hypothetical protein POPTRDRAFT_588835 [Populus trichocarpa]
          Length = 488

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 91/309 (29%), Gaps = 36/309 (11%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL----- 112
           +V G  G+LSL   + + +G Y+  +               S            L     
Sbjct: 1   MVWGYGGVLSLGQGVFFGLGGYAMAMFLKLEASDPISTKIQSTPGIPDFMDWNQLTELPS 60

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA-----------------DR 155
             L F+    ++A +I        LI +        G+Y A                   
Sbjct: 61  FWLPFKSLPFSLAAVIAVPTLLAWLISFAMFKRRVGGVYFAIITQAVALIVTVLIIGQQG 120

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                  +  L   + + +     +  +YYV + +   +  +  W++   +      +RD
Sbjct: 121 YTGGVNGMTDLKTLWGWDTRTDSAKYILYYVCVALLIGAIVLCRWIQTGKVGTLLLAMRD 180

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
            +         +   K+  F +++A  G+ GA F      +SP       +I ++    +
Sbjct: 181 KEDRVRFSGYDVANFKVFVFCLAAALSGIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAV 240

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  SL      T ++                    F  SF      LM      V +  
Sbjct: 241 GGRMSLVGAVYGTLLVNAGKTY--------------FSESFPDLWLFLMAGLFIGVTMAF 286

Query: 336 SHSLLRLRT 344
              L  L  
Sbjct: 287 PMGLAGLWE 295


>gi|163758516|ref|ZP_02165604.1| branched-chain amino acid ABC transporter, permease protein
           [Hoeflea phototrophica DFL-43]
 gi|162284805|gb|EDQ35088.1| branched-chain amino acid ABC transporter, permease protein
           [Hoeflea phototrophica DFL-43]
          Length = 314

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/327 (16%), Positives = 116/327 (35%), Gaps = 28/327 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   ++  L         Y   +  ++++  ++A G +++ G  GLLSL   + ++ G 
Sbjct: 9   VLHIAIIAALAASFFVLPDYHVGVLARVMVLAVYAIGYNMLFGYTGLLSLGHALFFSAGM 68

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y + +  +  GL   L + + A+ +    +I+G  +L+ +     I TL+ ++     ++
Sbjct: 69  YGFALAVNHGGLPTGLALLLGALAAFLTSLIIGFLALRTKEVAFMIVTLMFAQAGYLTVL 128

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            +  +T G  G                           +  E   ++  L +  L     
Sbjct: 129 YFGAVTRGDEG-------------FVLSTAQRTLAGIDLSGEATRFWAALILFSLCLLGT 175

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++ +  A   +R+N++    L       KL A  VS    G+ GA +A     +  
Sbjct: 176 AALVKSRLGRAMIAVRENEERARMLGYDTHRLKLIAILVSGTLSGIGGAAYALLFGYVGA 235

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                  +I  +  V+LGG  +          +  +++L   +                 
Sbjct: 236 TFATVQYSIFPLLWVLLGGAGTTIGPLIGVLFMFYLIDLSSSV---------------TD 280

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345
            +  +  +AL L+ L     L+     
Sbjct: 281 AYMLIAGLALVLLCLFAPQGLVGEIRR 307


>gi|124265892|ref|YP_001019896.1| putative permease transporter transmembrane protein [Methylibium
           petroleiphilum PM1]
 gi|124258667|gb|ABM93661.1| putative permease transporter transmembrane protein [Methylibium
           petroleiphilum PM1]
          Length = 378

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/329 (13%), Positives = 89/329 (27%), Gaps = 32/329 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---- 86
            A     Y  ++  +I+ Y + A  + ++ G  G+LSL   + +A+G Y+  +       
Sbjct: 49  SAFHLSDYAVALIGKIMCYAICALAMDLIWGYTGILSLGHGLFFALGGYAMGMYLMRQIG 108

Query: 87  -----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF-- 133
                            W  +P     S +    + L                       
Sbjct: 109 RDGNYQSDLPDFMVFLDWKELPWHWSFSDSFVATLFLIVAVPGLLAFVFGFFAFRSRIKG 168

Query: 134 -QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
               +I            +  +  +          R    P +     + ++ +      
Sbjct: 169 VYFSIITQALTFAAMLLFFRNETGFGGNNGFTDFKRILSIPIAQPSTRMVLFVLTGLTLI 228

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               +  WL  T      + IRD +          +  KL+ + +S+   G+AGA +   
Sbjct: 229 GFFLLARWLIHTKFGRVLQAIRDAENRVMFCGYEPLNYKLAIWTLSAVMCGIAGALYVPQ 288

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              I+P     + +I +     +GG  +L         +                    F
Sbjct: 289 VGIINPGEMSPAASIEIAIWAAVGGRATLIGPIVGAFFVNFAKSW--------------F 334

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              F       +      V L     ++ 
Sbjct: 335 TQVFPEFWLYFLGALFIAVTLFLPDGIVG 363


>gi|311107305|ref|YP_003980158.1| high-affinity branched-chain amino acid transport system permease
           BraD 2 [Achromobacter xylosoxidans A8]
 gi|310761994|gb|ADP17443.1| high-affinity branched-chain amino acid transport system permease
           protein BraD 2 [Achromobacter xylosoxidans A8]
          Length = 309

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 93/305 (30%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +GL++        IGA +   +              
Sbjct: 8   LINGVTLGSVYALVALGYTMVYGIIGLINFAHGDVVMIGAMAATTIAISLVGGDP--STS 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G   ++     +        +A   +    +   +      +             
Sbjct: 66  AFVVLGVGLLVSVPLCMAVGWTAERVAYRPLRRAPRLAALITAIGVSIILQNVAMMGWGR 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  ++    F  +          +++    +   ++  + +T +  A R    N++
Sbjct: 126 NYLNFPQVLSPQVFEIAGARMSSLQIAIVVIAALIMGGLLAVVHKTRLGTAMRATAQNRE 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   I     +AF + SA   +AG   A     +S     F   +   +  +LGG+
Sbjct: 186 VAGLMGVNINTVISAAFLIGSALAAVAGMMVATYYG-VSQYTMGFMLGLKAFTAAVLGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L  +  L  G         L      +          L LV++ R   
Sbjct: 245 GNLVGAMAGGLLLGIIESLGAGYIGDLTGGFLG-----SHYQDVFAFFVLVLVLIFRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|126462705|ref|YP_001043819.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
 gi|126104369|gb|ABN77047.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
          Length = 410

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/353 (14%), Positives = 98/353 (27%), Gaps = 36/353 (10%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L     G             + L   + A  + +V G  G+LSL  +  +A+G Y   + 
Sbjct: 28  LASHAYGTAFLSTSFVKTLGKTLCLCLVALAMDLVWGYAGILSLGHMAFFALGGYMIGMW 87

Query: 85  GSRYGLSIWLL-------------------------------IPVSAMISGACGMIMGLP 113
                    ++                               +P     + +  + + L 
Sbjct: 88  LMYARTEDIVVQALSKAPLPATPQEISDGVASQIFGVVGGAELPAVWAFAHSLPLQLALV 147

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
            L      L    L        + +         A      +          L      P
Sbjct: 148 VLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALALHLFQNDAGLRGNNGLSGLQNIP 207

Query: 174 SSFVI----YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
               +      ++ ++   G   L   +  W+      +  R IRD+++    L  ++  
Sbjct: 208 GLVQVSQDRLSVWFFWASAGALALGYLLAAWIVSGKFGSVLRAIRDDEQRVRFLGYSVES 267

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            KL  F +++    +AGA +      I+P       +I +   V +GG   L       A
Sbjct: 268 YKLFIFTLTAVIAAVAGALYYPQAGIINPAELAPIASIYLAVWVAIGGRGRLYGAVIGAA 327

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +  +     G      +        +      L+ +A  LV L     +  L
Sbjct: 328 FVSLLSTWFTGGRAPDLSLGFA-TIQWVDWWQILLGLAFVLVTLFAPQGIGGL 379


>gi|312199055|ref|YP_004019116.1| ABC transporter [Frankia sp. EuI1c]
 gi|311230391|gb|ADP83246.1| ABC transporter related protein [Frankia sp. EuI1c]
          Length = 939

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/298 (16%), Positives = 110/298 (36%), Gaps = 16/298 (5%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             ++  L   A  +  +   +  Q L   +     ++V G  G++SL        GA++ 
Sbjct: 345 IAVVGLLAYTAWGATDFWAGLLAQGLATAIVLLSFTVVTGIGGMVSLAQAAFVLSGAFTA 404

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            IL           +    ++S   G+++ LP+ +  G  LA++TL ++ I +N+L +  
Sbjct: 405 GILLGHGVP-FVPALIAGTLVSAFVGLVVALPTRRLGGLPLALSTLALAFIGENLLFQIH 463

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            I+NG +G  V                  R          ++  +L+ +  L   ++  L
Sbjct: 464 SISNGSSGWPVTPP---------------RIGGLDTSNPRWLVLLLVLLVGLGVWVVHAL 508

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
           R ++   A   +R ++    +    +   KL  F +S+   G  G   AA+  R++   F
Sbjct: 509 RSSSTGRAMLAVRSSEVGARTSGIAVDRMKLLLFVISAGIAGFGGVMLAAAHGRVTRTDF 568

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                ++ ++  +   +   +    A  +     ++   +    +   + F       
Sbjct: 569 TVLLGLVWLATTVTLSIRRPAGAVLAGLVSALAPQVLEHVPASTYFMQMVFGLGAISL 626



 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 77/302 (25%), Gaps = 19/302 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAM 101
            +   +Y + A GL++   + G+ +          AY +  +   +    +   I    +
Sbjct: 12  LVTGALYAILASGLTLSYQTSGVFNFGQGGVAFSTAYLFFQLNTGQKLPVVVSAIICIGI 71

Query: 102 ISGACGMIMGLPSLKFRGDYLAIAT-------LIMSEIFQNILIKWKPITNGKAGIYVAD 154
            +   G ++ L       +    A        LI        ++         +     +
Sbjct: 72  FAPLLGWVLHLVLFNPLRESSIAAKMVASLGLLIALPSLGLWIVALLKDWLNLSSCSQQN 131

Query: 155 RLYFLGTTVRSLIRFFRFPSSF---------VIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                   +  + R      S          +I +     +L    F +  +   +R T 
Sbjct: 132 PKARCVPEIEDVFRIPGLGPSPKKIHSIGNGLIIDSDQLSMLGAAVFAAVLLWYLVRHTR 191

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           I    R                  A   ++  S    G+ G   A      S        
Sbjct: 192 IGLEMRAAVSRPNLAALRGVDPDRASAVSWITSCGLAGLVGVLLAPMFGLSSFSYTTLL- 250

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
             I I  V+LG M S+        +L  V  L  G                 +    +  
Sbjct: 251 -FISIPAVVLGRMASIPIAMLGGLLLGVVQNLVNGYVTLDITGFPTAVPFIILFGLLIYF 309

Query: 326 IA 327
            A
Sbjct: 310 GA 311


>gi|222086814|ref|YP_002545348.1| urea or short-chain amide ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221724262|gb|ACM27418.1| urea or short-chain amide ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 386

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/344 (15%), Positives = 101/344 (29%), Gaps = 33/344 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             V    LL     A     Y+ S+  + L Y + A  L +V G  G+LSL     +A+G
Sbjct: 26  FLVPLSNLLLPETSALHVPTYLMSLFGKYLTYALLALALDLVWGYCGILSLGHGAFFALG 85

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  +   R   +                    LP   +  D+   A +++      + 
Sbjct: 86  GYAMGMYLMRQIGTRGTYGNPILPDFMVFLNWKELPWFWYGFDHFWFAMIMVLAAPGLLA 145

Query: 138 IKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
             +                             +  D  +     +        F      
Sbjct: 146 FIFGWFAFRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILGFNIQADG 205

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
               ++ +   +  L+  +   + R+        +RD +     L   +   KL  F VS
Sbjct: 206 TRATLFAITALLLALALMLSSAIVRSKFGKVLVGVRDAESRTRFLGYRVEHMKLFVFVVS 265

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           +   G+AGA +      I+P  F  + +I V+    +GG  +L        ++ G   + 
Sbjct: 266 AMMAGIAGALYVPQIGIINPGEFAPANSIEVVIWTAVGGRATLIGPIIGAILVNGGKTIF 325

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            G+              F       +      V L     ++  
Sbjct: 326 TGL--------------FPSFWLFALGGLFVAVTLFLPKGIVGT 355


>gi|194288819|ref|YP_002004726.1| branched-chain amino acid ABC transporter permease [Cupriavidus
           taiwanensis LMG 19424]
 gi|193222654|emb|CAQ68657.1| putative branched-chain amino acid transport system permease,
           membrane component [Cupriavidus taiwanensis LMG 19424]
          Length = 329

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 64/308 (20%), Positives = 114/308 (37%), Gaps = 29/308 (9%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
              ++   +     I  +   G+ +++G  G+++L     Y IGAY+     +  G    
Sbjct: 25  LLSRHHIDLLNFAAILAVGGLGVGLLLGQCGIVNLAQASFYGIGAYASAYCTTVLGWPAL 84

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
                  + S A    +GLP L+  G +LA+ATL +  I   +  +W  +T G  GI   
Sbjct: 85  AGAAAGLLASAALAAAIGLPVLRLGGFFLALATLAVGSIANVLFFEWDWLTGGTLGIGGI 144

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            +L   G  + +  R               YY    +  L   ++  L R     A R +
Sbjct: 145 PKLSLFGFLLDTPER--------------YYYFAWPLVALLLWLVDNLVRGRPGLAMRAM 190

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           RD   A   L   +   K + F +S+    +AG+ FA     +S   F    +I+ + + 
Sbjct: 191 RDAAPAAQVLGIDMHRLKTAMFVLSAMLGSLAGSLFAHYVSFVSVQSFTVERSIVFLLVP 250

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ++ G  S   +      +  V EL  G+  +               H  L    L LV+ 
Sbjct: 251 VVAGARSTYGVVIGALFVSLVPELLSGLGDF---------------HQVLFGAVLVLVVT 295

Query: 334 MRSHSLLR 341
           +    ++ 
Sbjct: 296 LMPGGIMG 303


>gi|295696319|ref|YP_003589557.1| inner-membrane translocator [Bacillus tusciae DSM 2912]
 gi|295411921|gb|ADG06413.1| inner-membrane translocator [Bacillus tusciae DSM 2912]
          Length = 292

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 88/275 (32%), Gaps = 12/275 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      + +GA+      + + L     + V
Sbjct: 8   LVNGLSVGSIYALIALGYTMVYGIIKLINFAHGDVFMVGAFVAYFSYTVFHLGFLGSLIV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S       G+++   + +       IA LI +      L     I  G         L  
Sbjct: 68  SMAACAVLGVVIERFAYRPLRKSTRIAALITAIGVSLFLENAGIIAVGAQARGYPSMLPN 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V   +    +++    L   +   + RT +  A R +  + +
Sbjct: 128 S-----------SINLGGVTISVQQIGIIVLSVVLMVILQFIVHRTKMGKAMRAVAYDAE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA    AG  + A    I P M      +      +LGG+
Sbjct: 177 AAQLMGIDVDRTISFTFAIGSALAAAAGVIYGAYYSAIDPLM-GIMPGLKAFIAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             +        +L  +  L   + F  +   + F 
Sbjct: 236 GVIPGAMVGGLVLGMIETLVQSLGFSLWRDAVAFA 270


>gi|144898540|emb|CAM75404.1| Branched-chain amino acid ABC-type transport system, permease
           components [Magnetospirillum gryphiswaldense MSR-1]
          Length = 304

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/312 (16%), Positives = 101/312 (32%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY--------SYVILGSRYGL 90
           + +      IY + A G ++V G + +++      Y +GA+        +  I G+   L
Sbjct: 8   LINGLTLGAIYGLIAIGYTMVYGIIRMINFAHGEIYMLGAFISLIAFLTATTIGGTSVAL 67

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + L +  + +++   G  +   + +   +   +A LI +     +L  +  +T G    
Sbjct: 68  GLILALMSTMILTALWGWAVERVAYRPLRNAPKLAPLISAIGMSIVLQNFSQLTQGARVK 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +           +  I   R  S  V        ++     L A     + RT++  A 
Sbjct: 128 PLPPL-------FKGGIEILRGDSFTVSLSYLQMVIIALTVALMAVFTWIITRTSLGRAQ 180

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    + K    L         + F + +    +AG         I      F   I   
Sbjct: 181 RATEQDMKMAALLGVNTDRIISATFVMGATLAAVAGLMVTLYYGVIDFY-IGFLAGIKAF 239

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ SL        ++  +     G     +  +  F               L L
Sbjct: 240 TAAVLGGIGSLPGAMLGGLLIGLIEAFWSGYFSIEYKDVAAFS-------------ILVL 286

Query: 331 VILMRSHSLLRL 342
           V+L R   LL  
Sbjct: 287 VLLFRPTGLLGR 298


>gi|145588199|ref|YP_001154796.1| inner-membrane translocator [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145046605|gb|ABP33232.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 318

 Score = 81.8 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 119/301 (39%), Gaps = 15/301 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             ++IL + +FA   ++++G  GLLS      +    Y    L    G+     I +  +
Sbjct: 27  FLMKILSFALFAAAFNLLLGYTGLLSFGHAAFFGGAGYCAGYLMRDMGVGPAAGIAIGVL 86

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            + A G ++G  +++ +G Y ++ TL ++++F  I ++                      
Sbjct: 87  FAAALGALIGGLAIRRQGIYFSMITLALAQMFYFICLQA--------------PASGGED 132

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
             + + R   F    +  ++ +YY +L +       I  +  +      + I++N+    
Sbjct: 133 GFQGIPRGDLFGLIDLQNDLNLYYFVLAITVAGFVFIQRIITSPFGQVLKAIKENEPRAI 192

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   K   F +S+A  G+AG+  A      +     ++ + +VI + ++GG+ ++
Sbjct: 193 SLGYKVNRFKFLVFVLSAALAGLAGSTQALVLGFETLTDVHWTMSGLVILMTLVGGVGTM 252

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +       +++ +      +  +    + + +  S     T +  +     ++     L+
Sbjct: 253 AGPFVGALVIVLLEHRVGEIGNFLAEITSIAWFNSLGESVTIVTGLIFIFCVMAFRRGLV 312

Query: 341 R 341
            
Sbjct: 313 G 313


>gi|311105872|ref|YP_003978725.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310760561|gb|ADP16010.1| inner-membrane translocator 32 [Achromobacter xylosoxidans A8]
          Length = 323

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 58/328 (17%), Positives = 122/328 (37%), Gaps = 29/328 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           LL +           A  +     +  +  L   + +   +I+ G  G LS    + + +
Sbjct: 5   LLTIALFGAALAAAAALMNSGVALTFVMMSLYAALLSQAWNILGGYGGQLSFGHALFFGV 64

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQ 134
           GAY+  +     G++ WL++P++  +    G+ +G  + +   +G Y A+ TL  +E+F+
Sbjct: 65  GAYAQALGQLNLGINPWLVLPMAIALGALVGLAVGGLTFRYGLKGSYFALVTLAFAEVFR 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +       G   +                       +          Y+LLG   L+
Sbjct: 125 ILALSVSFTGGGVGLMVPLQ---------------EGVANMQFGSRRGYIYLLLGFVLLA 169

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +  WLR +      + +RDN+ A  ++    +  KL   A+S+AF+  AGAF+     
Sbjct: 170 LVVTAWLRHSRFGAYLQAVRDNEDAARAIGVNPLRVKLGGIALSAAFVSAAGAFYVQVFQ 229

Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
            I P   F  + ++  +   I+GG+ +L         L  + +L   +            
Sbjct: 230 YIDPGIAFGSAVSVEALVGAIVGGLGTLWGPVLGAVTLHALSDLTRNLFG---------- 279

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    +  + L ++++     +  
Sbjct: 280 -ELPGISMVIYGVVLIVIVMFLPRGITG 306


>gi|167582852|ref|ZP_02375726.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis TXDOH]
 gi|167620993|ref|ZP_02389624.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis Bt4]
          Length = 325

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 123/302 (40%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS    +  A   Y         G +  L +    M
Sbjct: 27  FMMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGTTPELGVLAGTM 86

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+++GL +++ +G Y A+ TL  +++   I ++                      
Sbjct: 87  AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 132

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R + F    +  ++ +YYV+L +   +   I+ +  +        I++N+    
Sbjct: 133 GLQGVPRGWLFGLVDLSSDLALYYVVLVVIACACLFIVRIVHSPFGQVLVAIKENEPRAT 192

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+A  G+AGA         +     ++ + +V+ + ++GGM +L
Sbjct: 193 SLGYDTDRFKLLAFILSAALAGLAGALKVVVLGFETLSDAYWTMSGLVVLMTLVGGMGTL 252

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSL-LKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +    +  +  +   + +  S     T +  +     +L     ++
Sbjct: 253 FGPLVGAALIVALEDRLGDIGGWLASVTHIDWFRSLGESATIVTGLIFIACVLAFRRGIV 312

Query: 341 RL 342
             
Sbjct: 313 GE 314


>gi|325523244|gb|EGD01610.1| branched-chain amino acid transporter permease [Burkholderia sp.
           TJI49]
          Length = 325

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 56/324 (17%), Positives = 132/324 (40%), Gaps = 16/324 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+Y +LL   L A     Y   +  ++L + +FA   ++++G  GLLS    +  A   Y
Sbjct: 6   VLYGVLLAALLVAPFIGAYPVFVM-KVLAFALFAAAFNLLIGYTGLLSFGHAMFLATAGY 64

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +        G +  L +    + +   G+ +GL +++ +G Y A+ TL  +++   I ++
Sbjct: 65  ATGYSMQTLGFTPELGVLAGTVAATLLGLAVGLFAIRRQGIYFAMITLAFAQMVYFIYLQ 124

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                                  ++ + R   F    +  ++ +YYV+L +   + + I+
Sbjct: 125 A--------------PFTHGEDGLQGVPRGRLFGLLDLSNDVALYYVVLAVIVAACAFIV 170

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +        I++N+    SL       KL AF +S+   G+AG+         +  
Sbjct: 171 RVVHSPFGQVLIAIKENEARAISLGYDTDRFKLLAFVLSAGLAGLAGSLKVLVLGFETLS 230

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318
              ++ + +V+ + ++GGM +L       A+++ + +    +  +  + + + +  S   
Sbjct: 231 DAYWTMSGLVVLMTLVGGMGTLFGPLLGAALIVALEDRLGDIGEWLASTTGIGWFHSLGE 290

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
             T +  +     +L     ++  
Sbjct: 291 SATIVTGLIFIACVLAFRRGIVGE 314


>gi|302060728|ref|ZP_07252269.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato K40]
          Length = 391

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/353 (13%), Positives = 102/353 (28%), Gaps = 36/353 (10%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++ ++    L L +       +  +M  + L Y   A GL +  G  G+LSL   + + 
Sbjct: 13  GVIGLLILAALILLVFPLTLDAFRLNMIGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFG 72

Query: 76  IGAYSYVIL--------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           +G Y   +                +           ++ + +          S+      
Sbjct: 73  LGGYCMAMFLKLEASDPQSTKIQSTPGIPDFMDWNQITELPALWVPFHSFTFSVFAVIAV 132

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVA--------DRLYFLGTTVRSLIRFFRFP 173
             +   I+        +     +     I +           L      +  +     + 
Sbjct: 133 PVLLAWIIGTALFKRRVGDVYFSIVTQAIALILTVLIIGQQGLTGGINGITDIKTLLGWD 192

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
                 ++ +Y+V  G+      I  ++  + +      +RD ++        +   K+ 
Sbjct: 193 IRSDGAKLALYFVNAGLLLGCILIGKFILASKLGRLLMAMRDKEERVRFSGYDVAGFKIF 252

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            + V++ F  + G  FA     +SP       +I ++    +GG  SL      + ++  
Sbjct: 253 VYCVAAGFSAIGGGLFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGSLLVNY 312

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                             F  SF      LM      V++     L  L    
Sbjct: 313 GKTY--------------FSESFPELWLYLMGGLFIAVVMYFPDGLAGLWESH 351


>gi|121605622|ref|YP_982951.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120594591|gb|ABM38030.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 322

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/289 (16%), Positives = 102/289 (35%), Gaps = 12/289 (4%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
           P+L  L   A        S+  +I I  +FA  L +++G  G++SL     + +G Y+  
Sbjct: 19  PVLWLLAFAAPLLVPSHASIINEIAIVALFAVSLDLILGYTGIVSLGHAAFFGMGGYAAA 78

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +          + + V  + +   G       ++       + TL +  I   +  K   
Sbjct: 79  LFAKLVMPDPLVGLAVGIVTATLLGAACSFTIMRGSDLTRLMVTLGVGLILLELANKLDW 138

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+        LGT              F +      +  L +      ++  + 
Sbjct: 139 LTGGADGLQGVVMGPLLGT------------FEFDLAGRTAAWYSLTVLLALFVLLRRVV 186

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            +      + IRDN+    ++   +       + +++   G AGA    +    S D+F+
Sbjct: 187 HSPFGATLKAIRDNRLRAMAIGIPVNRKLAVVYTLAAGVAGAAGALMTQTTGFASLDLFE 246

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           F  +  V+ I+++GG   L        +   + +    +   Y+   + 
Sbjct: 247 FHRSADVMLILVIGGTGWLYGGVAGAIVFKLMQDALSSITPQYWTFWIG 295


>gi|163732410|ref|ZP_02139856.1| putative permease component of ABC transporter [Roseobacter
           litoralis Och 149]
 gi|161394708|gb|EDQ19031.1| putative permease component of ABC transporter [Roseobacter
           litoralis Och 149]
          Length = 368

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/346 (13%), Positives = 97/346 (28%), Gaps = 28/346 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           ++K L  L       +   +       ++ +      +Y M A  +S+  GS G+L++  
Sbjct: 7   HNKTLQWLFYAAAFAVLGAVPLISDDAFLLNQLAIYGVYGMLAVSISLCWGSGGILNMGQ 66

Query: 71  VIAYAIGAYSYVILGSR-----------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
            IA+ +GAY   +                  +    +P            + L  +    
Sbjct: 67  GIAFGLGAYCMAMTMQMQTQAEGTIPPFMLNNGLDSLPQLWQPFQNTATGITLALVVPTA 126

Query: 120 DYLAIATLIMSEIFQ---NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
            YL    ++ +         ++    ++                  +             
Sbjct: 127 FYLIFGGIMFTARVSGPFFAIMTLATLSAFATIFVDLQPYTNGVNGISPPGSLNLGNLEI 186

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
             Y    Y+ +  M          + ++      R ++D+ +    L   +   +   + 
Sbjct: 187 DPYSSGAYWSVFAMLVACTVAAKLINQSRFGLVVRALKDDPERVRFLGYNVAVYETLVYT 246

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           +S     +AG  FA     +SP  F+   +I ++    LGG  SL         + G   
Sbjct: 247 LSGLIAAIAGCCFAVLTQYVSPAQFEVGFSISIVIWTALGGRNSLIWAMFGAFAVQGAQS 306

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                              F      ++  +  LV+         L
Sbjct: 307 YV--------------GDQFLSTWILILGFSFILVVRFLPGGFAGL 338


>gi|330836845|ref|YP_004411486.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Spirochaeta coccoides DSM 17374]
 gi|329748748|gb|AEC02104.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Spirochaeta coccoides DSM 17374]
          Length = 297

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 94/305 (30%), Gaps = 22/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++      + +GAY      S + L  W+   V
Sbjct: 10  LTNGLSLGSLYALVAIGYTMVYGILRLINFAHGDIFMLGAYFAYYAISVFFLPWWVGAVV 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  ++ A G+++   + +   +   I+ +I +      L     +  G            
Sbjct: 70  AIGLTCATGLLIERVAYRPLRNSPRISVMISAIGVSFFLENLATVIFGGRPKAFPVPAVL 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V        + +    +  +++  + RT    A R +  +  
Sbjct: 130 GK----------SIMIGKVSIMPVSLIIPVATLVILLALMYVVHRTRTGMAMRAVSRDYT 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA  S      G  +     ++ P M      I      +LGG+
Sbjct: 180 AAKLMGIDVNRIIAITFATGSILAAFGGIMWGLKYPQLQPLM-GVMPGIKCFIAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L     L                   +     +  + L  ++L++   
Sbjct: 239 GNIMGAVLGGLVLGLAEILITAFLPAL-----------SGYRDAIAFVILIAILLLKPSG 287

Query: 339 LLRLR 343
           +L  +
Sbjct: 288 ILGTK 292


>gi|226192952|ref|ZP_03788564.1| ABC-transporter [Burkholderia pseudomallei Pakistan 9]
 gi|225935042|gb|EEH31017.1| ABC-transporter [Burkholderia pseudomallei Pakistan 9]
          Length = 585

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 4   ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 64  GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298


>gi|118588420|ref|ZP_01545829.1| putative branched-chain amino acid transport system permease
           [Stappia aggregata IAM 12614]
 gi|118439126|gb|EAV45758.1| putative branched-chain amino acid transport system permease
           [Stappia aggregata IAM 12614]
          Length = 358

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 75/328 (22%), Positives = 134/328 (40%), Gaps = 13/328 (3%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +   V  +  F  + A  +  ++ S+ I  L++ + A GL+I+ G  G LSL       +
Sbjct: 27  VGLAVILITAFAVIPALANDFFLTSIMIPFLVFSLAAIGLNILTGFCGQLSLGTGAFMGV 86

Query: 77  GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GAY+   +       ++ +++ +S + S A G + GLPSL+ +G YLA+ TL      + 
Sbjct: 87  GAYAAYKLTSIFPDANVIVMVLLSGVFSAAIGAVFGLPSLRIKGLYLAVTTLAAQFFLEW 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             I+   + N                 V     F    +      +  Y+++LG+  L A
Sbjct: 147 CFIRIPWLYNYN---------ASGAIEVPRREVFGIIATGAEATPLARYFIVLGITVLIA 197

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254
            ++  + R  I  +W  IRD   A   +    +  KL AFAVSS   G+AGA       +
Sbjct: 198 FLMANVLRGRIGRSWMMIRDMDIAAELMGIRPLQTKLMAFAVSSYICGVAGAMMVFFWLN 257

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
              P  +    +  V+ +VILGG+ SL       A +  +  +   +       L     
Sbjct: 258 AAEPSSYSIRLSFQVLFMVILGGLGSLGGAFMGAAFIWILPVILKFVPGLLGFDLAA--E 315

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +       ++   +   +++  H   RL
Sbjct: 316 TVEHATFMIVGALIIFFLIVEPHGFARL 343


>gi|239906880|ref|YP_002953621.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
 gi|239796746|dbj|BAH75735.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
          Length = 306

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 98/304 (32%), Gaps = 21/304 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     LIY + A G ++V G + L++      Y +GA+  +   S        ++  
Sbjct: 18  LVNGFTLGLIYALIAVGYTMVYGVIELINFAHGEIYMLGAFLTLSFISMGLPLPLAVLLA 77

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +    ++  +     R +   +A LI +      L     I  G         + F
Sbjct: 78  MLAAAAIGVLLDIIAYRPLR-EAPRLAALITAIGMSIFLQNLAMIIWGSR------PMPF 130

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +         S V        +      L   + L + RT +  A R +  NQ 
Sbjct: 131 PKQALPAFFSEPALTFSDVTISWMQVIIYAVALLLMVGLNLIITRTRVGTAMRALAQNQT 190

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA   MAG   +   + + P M   +  +   +  +LGG+
Sbjct: 191 AASLMGINVNRVISFTFALGSAMGAMAGIMVSMYYNTMYPTMGYLA-GVKAFAAAVLGGI 249

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L     L  G                +     +    + LVI+ R   
Sbjct: 250 GSVPGAMLGGVVLGIAETLGAGYVS-------------SPYRDGVAYAVMILVIIFRPSG 296

Query: 339 LLRL 342
           LL  
Sbjct: 297 LLGR 300


>gi|146279319|ref|YP_001169477.1| hypothetical protein Rsph17025_3288 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145557560|gb|ABP72172.1| hypothetical protein Rsph17025_3288 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 332

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 56/310 (18%), Positives = 115/310 (37%), Gaps = 29/310 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS      +   AY        +G      I +   
Sbjct: 45  FLMKLLCFALFAAAFNLLLGYTGLLSFGHATFFGGSAYFTAHAVKVWGWQPEFGILLGVA 104

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            + A G++MG  +++ +G Y A+ TL +S++F    ++                      
Sbjct: 105 GAAALGLVMGAIAIRRQGIYFAMITLALSQMFFFFCLQAGFTHG--------------ED 150

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++S+ R   F    +     MY+ +L +  L    I     +      + IR+N+    
Sbjct: 151 GIQSVPRGRLFGMINLNDTTNMYFFVLVVFALGMLAIWRFVNSPFGMILKAIRENEPRAI 210

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL  ++   KL AF +S+A  G+AG   A      +     +  +  VI + +LGG+ +L
Sbjct: 211 SLGYSVAEYKLGAFVMSAALAGLAGGVKALVFQFATLTDVTWQMSGEVILMTLLGGIGTL 270

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +++ +        F                 T +  +     +L+    ++ 
Sbjct: 271 VGPVVGAGLVVTLQNYLATSQFPV---------------TIITGLVFMACVLLFRRGIVG 315

Query: 342 LRTPSNFLER 351
               S    +
Sbjct: 316 EFYASRLGRK 325


>gi|332284980|ref|YP_004416891.1| putative branched-chain amino acid transport permease [Pusillimonas
           sp. T7-7]
 gi|330428933|gb|AEC20267.1| putative branched-chain amino acid transport permease [Pusillimonas
           sp. T7-7]
          Length = 323

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 131/324 (40%), Gaps = 16/324 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  +L+ + +    +        ++I+ Y +FA   ++++G  GLLS          AY
Sbjct: 5   LISYILVAIIIALLPAIGAYPIFVMKIMCYALFACAFNLLLGYTGLLSFGHAAFLGGAAY 64

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +     + +G    + +     ++   G++MG  +++  G Y A+ TL M+++     ++
Sbjct: 65  ATGHSLAVWGFPTIVGLLFGTGVAAVMGLVMGALAIRRSGIYFAMITLAMAQMVFFFFLQ 124

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                 G+ G+    R                     +  +I +YYV++G+ F+  +I  
Sbjct: 125 APFTH-GEDGLQGIPRGTLF--------------GLDLAQDINLYYVVMGIFFIGYAICW 169

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
               +      + IR+N+    SL   +   KL  F +S+A  G+AGA  A      +  
Sbjct: 170 RTINSPFGQVLKAIRENEPRTVSLGYNVDNFKLLVFVLSAALAGLAGATKALVFVSATLS 229

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318
              +  + +VI + ++GG+ + +       I++ +         +  N + +++      
Sbjct: 230 DATWQMSGMVILMTLIGGLGTFTGPVIGAFIVVMLENKVGEFGRFLSNTTGIEWFKVLGE 289

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
             T ++ +   + ++     ++  
Sbjct: 290 SVTIVIGLIFIICVMAFRRGIVGE 313


>gi|318604901|emb|CBY26399.1| urea ABC transporter, permease protein UrtB [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 533

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 81/288 (28%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++ S +       + +  +++      +       
Sbjct: 260 ITYGLLGVINMAHGEMLMLGAYSAYLVQSLFQQLAPHWLALYPLVALPVAFFITAGIGMA 319

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W        G+ +      L     + +         +
Sbjct: 320 LER--TVIRHLYGRPLETLLATWGISLMLIQGVRMIFGAQNLEVANLAWLSGGVQLLPNL 377

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+  +  +     L L +T +    R +  N+              + AF +
Sbjct: 378 VLPWNRIAVIAFVVIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGKVDMLAFGL 437

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+LGG+  L+    A   L  + ++
Sbjct: 438 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 495

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 496 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 530


>gi|288905952|ref|YP_003431174.1| amino acid ABC transporter [Streptococcus gallolyticus UCN34]
 gi|306831971|ref|ZP_07465126.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|325978918|ref|YP_004288634.1| branched-chain amino acid ABC uptake transporter membrane-spanning
           protein [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
 gi|288732678|emb|CBI14250.1| putative amino acid ABC transporter, membrane protein
           [Streptococcus gallolyticus UCN34]
 gi|304425897|gb|EFM29014.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|325178846|emb|CBZ48890.1| branched-chain amino acid ABC uptake transporter membrane-spanning
           protein [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
          Length = 294

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 104/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   IY + A G ++V G + L++      Y +GA+      S   ++ W+ +  
Sbjct: 10  LVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFIGYYAISSLHMNFWIALIF 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   GMI+   + +       IA LI +      L        G            
Sbjct: 70  TMIATACLGMIIEFLAYRPLRHSTRIAALITAIGVSFFLEYGMVFLVGANTRS------- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    +    V        +L+    L  ++ L +++T +  A R +  +  
Sbjct: 123 ----FPQAIDIVSYKIGSVTVTNIQLLILIVSLVLMVALQLIVKKTKMGKAMRAVSVDSD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG       + I P M   +  I      +LGG+
Sbjct: 179 AAELMGINVNSTISFTFALGSALAGAAGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +  L   +N              +     ++   L +++L+R   
Sbjct: 238 GIIPGAALGGFVIGILETLSISLN-------------LSSYRDAIVYGVLIIILLVRPAG 284

Query: 339 LLR 341
           +L 
Sbjct: 285 ILG 287


>gi|218778556|ref|YP_002429874.1| branched-chain amino acid ABC transporter permease
           [Desulfatibacillum alkenivorans AK-01]
 gi|218759940|gb|ACL02406.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 320

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 59/287 (20%), Positives = 125/287 (43%), Gaps = 9/287 (3%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L  +    L +         Y+  + I ILI+ + A    +++G  G+ S   V  + IG
Sbjct: 4   LMAIIYGGLAIMPLFVGGVDYMMHILIMILIWGVVASCWDLIMGFAGIFSFGQVAFFVIG 63

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  I+ +++G+  +  I ++  I+   G+++GLP L+ +G Y+A+ T  +  I +  L
Sbjct: 64  AYASAIVSNKFGIPPFFSIFIAGGIAAILGVLVGLPCLRLKGAYVALVTFAVHMILEPFL 123

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                   G  G             +          +     ++ ++Y+ L +  + + I
Sbjct: 124 KGHMGRAIGTGGSRGI---------LTIPPINIFGYAFTPDNKVAVFYLTLVLAVICSVI 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           IL + R+    A+  ++D++    SL  +    KL+ FA++S   GM G F+A     +S
Sbjct: 175 ILMVIRSFWGTAFLALKDSEDFSASLGVSAFKYKLAVFALTSFLTGMVGGFYAHYVGMLS 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
             M      + ++ ++++GG+           + + + E+   +  Y
Sbjct: 235 TRMLGIDLFVTLMIMLVIGGIGQFPGAILGAIVTVTLNEMLSPLGPY 281


>gi|84684178|ref|ZP_01012080.1| ABC transporter permease protein [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84667931|gb|EAQ14399.1| ABC transporter permease protein [Rhodobacterales bacterium
           HTCC2654]
          Length = 323

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/339 (15%), Positives = 123/339 (36%), Gaps = 41/339 (12%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L V+  L +   +       +   +  ++ I  + A  L++++G  GL+S       
Sbjct: 6   IITLVVMALLAVLPPVFYLTGNAFYLDLATRLTILAIAAVSLNLILGYGGLISFGHAAYL 65

Query: 75  AIGAYSYVILGSRYGL-----------SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
            IGAY+  I    +             S ++ IP++  ++    ++ G   L+ +G Y  
Sbjct: 66  GIGAYAVGIPAHHWLYGGLESLGLATTSGYVQIPLAIGVAALFALVTGAICLRTKGVYFI 125

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           + T+  +++    ++  +    G  G+ +  R       +   ++ F      ++     
Sbjct: 126 MITMAFAQMMYYAIVSIEE-YGGDDGLVIDSRSELPFIDLDDPLQLFGLAYVSLVV---- 180

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
                     +  I+  +  +      R  + N +    L       +L+A+ ++ A  G
Sbjct: 181 ----------AMLIVRMIVNSRFGMVLRGAKGNNERVVMLGFNTYLFRLTAYVIAGAMAG 230

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
            AGA        ISP+M  +  +  ++ +VILGG  +L        + I + E+   +  
Sbjct: 231 YAGALLGNFTTFISPEMMDWGRSGELMFMVILGGTATLVGPVIGATLFIVLEEVLSSLTV 290

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           Y+                    + L  V+L     ++ +
Sbjct: 291 YWH---------------LPFGLLLLAVVLFGKGGIMGM 314


>gi|209965125|ref|YP_002298040.1| high-affinity branched-chain amino acid transport system permease
           protein LivH [Rhodospirillum centenum SW]
 gi|209958591|gb|ACI99227.1| high-affinity branched-chain amino acid transport system permease
           protein LivH [Rhodospirillum centenum SW]
          Length = 311

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/323 (15%), Positives = 108/323 (33%), Gaps = 29/323 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS------- 80
             LG     +++ +      IY + A G ++V G + +++      Y +GA+        
Sbjct: 4   AALGLGTFLQHLINGLTLGAIYGLIAIGYTMVYGIIRMINFAHGEIYMLGAFVAVTGFTL 63

Query: 81  -YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +      L + +++  S + + A G  +   + +       +A LI +      L  
Sbjct: 64  LSALGVQSVALGLIVVLAASILFTAAYGWTVERVAYRPLRGSGRLAPLISAIGMSIFLQN 123

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           +  +T G        R   L   +   I  ++  +  +       ++++    L AS  +
Sbjct: 124 YVMLTQGA-------RPKPLQPVLSGGITLWQGETFALGITYIQAFIIVLTVALMASFTV 176

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            + RT +  A R    ++     L   +       F + ++   +AG         +   
Sbjct: 177 LIARTPLGRAQRACEQDRTMAALLGINVDRTISLTFVMGASLAAVAGVLVTMYYGVVDFY 236

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
              F   +   +  +LGG+ SL        ++  +     G     +  +  F       
Sbjct: 237 -IGFLAGLKAFTAAVLGGIGSLPGAMLGGLLIGLIEAFFTGYVSGAYKDVAAFS------ 289

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
                   L LV+++R   LL  
Sbjct: 290 -------ILILVLVLRPTGLLGR 305


>gi|114765023|ref|ZP_01444170.1| branched-chain amino acid ABC transporter, permease protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114542570|gb|EAU45595.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. HTCC2601]
          Length = 618

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/309 (17%), Positives = 120/309 (38%), Gaps = 34/309 (11%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
              +++  + I ++I+ +FA  L  ++GS GL+S      +  GAY+  +L       + 
Sbjct: 328 FVDQFMLILTIDMVIFALFAASLHFILGSGGLVSFGHAAFFGGGAYAAALLVFHTDTPME 387

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L    + + +G   + +G   ++  G Y A+ TL  S++  ++  +W+ +T G  G+   
Sbjct: 388 LAFLFAPLAAGLLALGIGWFCIRLTGVYFAMLTLAFSQLVWSLAFQWRAVTRGDDGLVNI 447

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
               +L  T                     YY  L +       +  +  +    A R  
Sbjct: 448 WPSEWLSGTET------------------YYYFALILGVGGILFLRHVIHSPFGYALRAG 489

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           RD+ +   +    +   +  AFA++ A  G+AG  F  ++  + P   + +++   + +V
Sbjct: 490 RDSPRQAEATGIDVKRVQFVAFALAGAMAGLAGGIFVFAKGSVFPTELEIAKSFDALIVV 549

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
            LGG+ +L+        +  V +    +                     L+ + +  V++
Sbjct: 550 FLGGVKTLAGGVVGAGFMTVVEDWLTRL----------------EYWRLLLGLVIIAVVI 593

Query: 334 MRSHSLLRL 342
           +    ++  
Sbjct: 594 VMPEGIVGT 602



 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 99/308 (32%), Gaps = 28/308 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY--SYVILGSRYGLSIWLLI 96
             +         + A GLS++ G   +++      Y +GA+   Y++      +  W  I
Sbjct: 8   FLTGLANAAALFLVASGLSLIFGVTRIVNFAHGSFYMLGAFIGIYLMEILPGAVGFWGAI 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ +  G  G  + +  L+       +  L+ +     ++     +  G          
Sbjct: 68  LLTGIAVGLIGAFVEMVVLRPIYRAPELFQLVATFGVILVIQDLALMIWGAEDRLGPRAP 127

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G           +         +   ++    F+  ++   + +T +    R    +
Sbjct: 128 GLRGV----------WRIFGEPVPKYDIILIAITPFILFALWYLITKTRLGVLVRAATQD 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +L     +     FA+ SA  G  GA            +  F+    V  +V++G
Sbjct: 178 REMVGALGVNQAWLFTGVFALGSALAGWGGALQLPKGGA--DLLMDFNIIGAVFVVVVIG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM SL     A+ ++  +                            LM + + +V+++R 
Sbjct: 236 GMGSLPGAFIASVLISVLNVFGVTY--------------LPQSTLVLMFVVMAVVLIIRP 281

Query: 337 HSLLRLRT 344
           + LL    
Sbjct: 282 YGLLGREE 289


>gi|330969708|gb|EGH69774.1| inner-membrane translocator [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 529

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 315

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 491

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526


>gi|241663461|ref|YP_002981821.1| urea ABC transporter permease protein UrtC [Ralstonia pickettii
           12D]
 gi|240865488|gb|ACS63149.1| urea ABC transporter, permease protein UrtC [Ralstonia pickettii
           12D]
          Length = 389

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/357 (13%), Positives = 97/357 (27%), Gaps = 32/357 (8%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            ++  +      LL           Y  ++  +I+ Y + A  L +V G  G+LSL   +
Sbjct: 29  SLIVCIGAPVCALLVPEGSPLHLSAYALTLVGKIMCYALAALALDLVWGYCGILSLGHGL 88

Query: 73  AYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
            +A+G Y   +                                          +++ L  
Sbjct: 89  FFALGGYGMGMYLMRSIGREGVYKSDLPDFMVFLDWKELPWFWHGTEHFAWAMLLVILVP 148

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
                 +   A     +     +I            +  +  +          R   FP 
Sbjct: 149 GVLAWLFGFFAFRSRVKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGFPI 208

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
           S +     ++        L+      +  +        IRD +          +  KL  
Sbjct: 209 SALPTRTVLFVATFVALVLAFIACRAIVTSKFGRVVTAIRDAEARVMFSGYNPLGYKLFV 268

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           +  S+   G+AGA +      I+P       +I +   V +GG  +L        ++ G 
Sbjct: 269 WTFSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAVWVAVGGRGTLIGPIIGAFLVNGA 328

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             L                         ++     LV L   + +L L +     +R
Sbjct: 329 KTLLTAW--------------VPEYWLFVLGAIFVLVTLYLPNGVLGLMSKLRMKKR 371


>gi|116249708|ref|YP_765546.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115254356|emb|CAK03984.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 348

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/312 (16%), Positives = 108/312 (34%), Gaps = 26/312 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            +L    + A         +  +I I  +FA  L +V+G  G++SL     + +GAY+  
Sbjct: 27  IVLWIAAVVAIFVLPSKMLLLTEIAITALFALSLDLVLGYAGIVSLGHAAFFGLGAYAAG 86

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +            +  +A +SG  G       L+       + TL ++ +   +  +   
Sbjct: 87  LFAKYAIAEPVTGLFAAAAVSGLAGFGASFLVLRGSDLTRLMTTLGIALMLAELANQMAW 146

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+        LG     L                 Y   L   F+   +   L 
Sbjct: 147 VTGGADGLSGVTIGPILGLFEFDLWGRTG------------YVYSLAALFVLTFVARHLV 194

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            ++   + R I+ N      +        +  + +++A+ G+AGA    +   +SPD+  
Sbjct: 195 NSSFGLSLRAIKANPMRAAMVAIPARNRIIVIYTIAAAYAGIAGALLTHTTSFVSPDVLA 254

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  +  V+ ++++GG+  L        I   + +                  S       
Sbjct: 255 FHRSADVLLVLVIGGVGYLYGGIIGAVIFTVLRDWLS--------------VSTPQYWMF 300

Query: 323 LMVIALFLVILM 334
            + + L  ++L+
Sbjct: 301 WIGLILIAIVLV 312


>gi|84499956|ref|ZP_00998222.1| ABC transporter permease protein [Oceanicola batsensis HTCC2597]
 gi|84391890|gb|EAQ04158.1| ABC transporter permease protein [Oceanicola batsensis HTCC2597]
          Length = 330

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 58/330 (17%), Positives = 116/330 (35%), Gaps = 29/330 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L +     L   L +  +  +   +G +IL Y + A  L +++G   L+S        
Sbjct: 22  AALVLFVLFALMPPLASALNDPFYVLIGTRILAYAIAAMALDLILGFGALVSFGHAAYLG 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            GAY+  IL S     ++L I    ++S    +I G  SL+ +G Y  + TL   ++   
Sbjct: 82  FGAYAVAILSSYGIDDLFLQIAAGIVMSAGFALITGAISLRTQGVYFIMITLAFGQMAFF 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             I                             R     +  +  +  +YY  L +     
Sbjct: 142 FFISLSAYGG--------------DDGYSLSQRSGVLGTDLLGSDYGLYYTTLALLIAVF 187

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   +  +     +  IR+N+    ++       +L+AF +S+    +AG   A     
Sbjct: 188 VLCNRIVNSRFGRVFTGIRENRTRMEAVGYAPFRFQLTAFVISACLTSVAGVLLANQAQF 247

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +SP    +  +  +I +V+LGG+ +L+       + + + E    +  ++          
Sbjct: 248 VSPAFMSWHRSGELIVMVVLGGVGTLTGGIVGAVVALLLEEWLGMLTHHWP--------- 298

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                  L    L L++L     +  L   
Sbjct: 299 ------LLFGTFLVLMVLFSPRGITGLIER 322


>gi|327479079|gb|AEA82389.1| ABC transporter, membrane spanning protein [Pseudomonas stutzeri
           DSM 4166]
          Length = 328

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 58/330 (17%), Positives = 127/330 (38%), Gaps = 29/330 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             +L+ +   A     +     +++L + +FA   ++++G  G+LS      +   AY  
Sbjct: 21  VLILIGVVALALAPFYFYPIFLMKVLCFALFACAFNLLLGYTGILSFGHAAFFGGSAYFT 80

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                 +GL+  L I V    +   G+I+G  +++ +G Y  + TL +S++F    ++  
Sbjct: 81  AHAVKEWGLTPELGILVGVAGAAFLGLIIGFLAIRRQGIYSTMITLALSQMFFFFCLQAS 140

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
                                ++++ R   F    +   ++MY+ +L +      +I  +
Sbjct: 141 FTHG--------------EDGIQNIPRGHLFGLIDLEEPLYMYFFVLSVFLAGMLLIWRV 186

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +      R+IR+N+    SL  T+   KL AF +S+A  G+AG   A      +    
Sbjct: 187 IHSPYGMILRSIRENENRAISLGYTVSRYKLGAFVMSAALAGLAGGLKALVFQFATLTDV 246

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            +  +  V+ + +LGG+ +L       A++  +                          T
Sbjct: 247 SWQMSGEVVLMTLLGGIGTLVGPIFGAALVTTLGNYFATSELPV---------------T 291

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            +  I   + +L+    ++     S   ++
Sbjct: 292 LVTGIIFMVCVLVFRRGMIGELYASRLGKK 321


>gi|320322765|gb|EFW78858.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. glycinea str. B076]
          Length = 529

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 77/288 (26%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G  G++++       +GAYS  ++           I    +I+      +       
Sbjct: 256 ITFGLPGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 315

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 491

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526


>gi|30261968|ref|NP_844345.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. Ames]
 gi|47527231|ref|YP_018580.1| branched chain amino acid ABC transporter permease [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49184808|ref|YP_028060.1| branched-chain amino acid ABC transporter permease [Bacillus
           anthracis str. Sterne]
 gi|65319251|ref|ZP_00392210.1| COG4177: ABC-type branched-chain amino acid transport system,
           permease component [Bacillus anthracis str. A2012]
 gi|165870114|ref|ZP_02214770.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0488]
 gi|167632928|ref|ZP_02391254.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0442]
 gi|167638374|ref|ZP_02396651.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0193]
 gi|170705979|ref|ZP_02896441.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0389]
 gi|177650843|ref|ZP_02933740.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0174]
 gi|190566292|ref|ZP_03019210.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis Tsiankovskii-I]
 gi|254684531|ref|ZP_05148391.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. CNEVA-9066]
 gi|254721289|ref|ZP_05183079.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A1055]
 gi|254734834|ref|ZP_05192546.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. Western North America USA6153]
 gi|254741235|ref|ZP_05198923.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. Kruger B]
 gi|254755489|ref|ZP_05207523.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. Vollum]
 gi|254760025|ref|ZP_05212049.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. Australia 94]
 gi|30256594|gb|AAP25831.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. Ames]
 gi|47502379|gb|AAT31055.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. 'Ames Ancestor']
 gi|49178735|gb|AAT54111.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. Sterne]
 gi|164714002|gb|EDR19523.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0488]
 gi|167513675|gb|EDR89044.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0193]
 gi|167531740|gb|EDR94405.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0442]
 gi|170128981|gb|EDS97846.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0389]
 gi|172083304|gb|EDT68365.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0174]
 gi|190562427|gb|EDV16394.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis Tsiankovskii-I]
          Length = 333

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 60/325 (18%), Positives = 130/325 (40%), Gaps = 31/325 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 15  VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  R      + ++ I  + +IS     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 75  VALLFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                        +YYV L    +   +
Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TLYYVTLICLLIIFVL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L  +    
Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
            R T ++ +   +V+L+    L+  
Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGT 311


>gi|187925993|ref|YP_001892338.1| inner-membrane translocator [Ralstonia pickettii 12J]
 gi|241665478|ref|YP_002983837.1| inner-membrane translocator [Ralstonia pickettii 12D]
 gi|187727747|gb|ACD28911.1| inner-membrane translocator [Ralstonia pickettii 12J]
 gi|240867505|gb|ACS65165.1| inner-membrane translocator [Ralstonia pickettii 12D]
          Length = 302

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 56/302 (18%), Positives = 119/302 (39%), Gaps = 41/302 (13%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             ++ + + I  + A  + + + S GLL++       IGAY+  +L     +   + +  
Sbjct: 11  YSNLVLTLGINALLALSIYLTL-SCGLLAMANAAFMGIGAYTAALLTMNAEMPFSVALLG 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +      +++G P+L+  G YLA+ATL   E+ + +++  +  T G  G+    +L  
Sbjct: 70  GMVAPAVVAVVIGRPTLRLSGVYLAMATLGFGEVVRVLILNTEDWTGGALGLNGIPQLTE 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                       +     L+  ++  +RR+ +  A+  I++++ 
Sbjct: 130 WWH-------------------------VALAVALTMFVLARMRRSKVGRAFEAIKEDET 164

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +   KL AF + +   G+AGA  A     I P+ F F   + ++++ ILGG 
Sbjct: 165 AAGLMGINVAGTKLLAFTLGAVIAGLAGALNAHLTFFIGPNEFGFDRGVEILTMTILGGT 224

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L+     + IL  + EL      +                  +  + L +++L     
Sbjct: 225 NGLTGPVLGSLILSLLPELLRAFKDF---------------RLVVNGVILMVIVLFLPKG 269

Query: 339 LL 340
           + 
Sbjct: 270 IW 271


>gi|116253491|ref|YP_769329.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115258139|emb|CAK09240.1| transmembrane component of a broad range amino acid ABC transporter
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 300

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 92/304 (30%), Gaps = 17/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G +G+++      + +G ++ +I+          L   
Sbjct: 8   LLNGLTLGSIYGLVAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLVLTSIFAGLPVA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      ++      +  + +A   L  S     ++                     
Sbjct: 68  VLLLVMLVVAMLMTSLWNWTIERVAYRPLRGSFRLAPLITAIGMSITLSN---FIQVTQG 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +    +    +   +    +++    L       + RTA+  A R    ++K
Sbjct: 125 PRNKPIPPMVSSVYQFGNISVSLKQIIIIVITAVLLTIFWYIVNRTALGRAQRATEQDRK 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       F + +A   +AG  +       S +   F+  +   +  +LGG+
Sbjct: 185 MAALLGVNVDQTISITFVMGAALAAVAGTMYLMYYGVASFND-GFTPGVKAFTAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        ++  +  L        +  +  F               L  V++ +   
Sbjct: 244 GSLPGAVFGGLLIGLIESLWSAYFTIAYKDVATF-------------AILAFVLIFKPTG 290

Query: 339 LLRL 342
           +L  
Sbjct: 291 ILGR 294


>gi|86606568|ref|YP_475331.1| urea ABC transporter, permease protein [Synechococcus sp. JA-3-3Ab]
 gi|86555110|gb|ABD00068.1| urea ABC transporter, permease protein [Synechococcus sp. JA-3-3Ab]
          Length = 402

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/315 (15%), Positives = 96/315 (30%), Gaps = 21/315 (6%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           +    +     ++  +L  +F+  T    +  ++  + L   + A G+ ++ G  G+LSL
Sbjct: 45  SSRKLLWEAGILIVLVLALIFVAPTVLSGFRLNLLGRFLALSIVALGIDLIWGYTGMLSL 104

Query: 69  NCVIAYAIGAYSYVIL-----------------GSRYGLSIWLLIPVSAMISGACGMIMG 111
              + +A+G Y+  +                  G       W         + A  +I  
Sbjct: 105 GHGVFFALGGYALGMHLKLQLPEGQIPEFFSLYGVTELPWFWYPFYSFPFTAVAVVLIPA 164

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           L +       +      +                         RL      + +    F 
Sbjct: 165 LVAAALGYLVVRNRIRGVYFSILTQATTIIFF----NFFNGQQRLINGTNGLTNFQTLFG 220

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
              +       +Y   +    L+  +  WL           IRD++             K
Sbjct: 221 LDVNSSEMRFAVYVTTVLAVVLAYLLCRWLTSGLFGRILVAIRDDEPRVRFSGYDPTGFK 280

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           +  FAVS+A  G+AGA F      ISP+      +I ++  V +GG  SL        ++
Sbjct: 281 VLVFAVSAALAGVAGALFTLQTGIISPNAMAVPFSIEMVIWVAVGGRASLVGAVLGALLV 340

Query: 292 IGVVELCCGMNFYYF 306
                L        +
Sbjct: 341 NFAKSLLSENFPEIW 355


>gi|320335000|ref|YP_004171711.1| ABC transporter integral membrane subunit [Deinococcus maricopensis
           DSM 21211]
 gi|319756289|gb|ADV68046.1| ABC-type transporter, integral membrane subunit [Deinococcus
           maricopensis DSM 21211]
          Length = 337

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 101/308 (32%), Gaps = 16/308 (5%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-------SRYGLSIWLLIPVSAM 101
           Y + A G ++V G L L++      +  GA     +            L + + +  + +
Sbjct: 24  YAIIALGYTMVYGVLQLINFAHSEVFVTGAIVGYEVFRVLEPSPMNGYLKLIIALIAAMI 83

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI-------YVAD 154
           +SG   +++   + +   +   +  LI +     IL     I  G  G            
Sbjct: 84  VSGGLNVLIERLAYRPLRNAPKLVPLITAIGVSLILQDLLKIIEGLQGRFDLTYTLPQGF 143

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
              F  T               V  ++    +++      A +   +  T +  A R + 
Sbjct: 144 SNKFCATGSSCAAFGDTLRRIGVDLQVKDIILVVVALLSLAVLNYLVNHTRLGRAIRAVA 203

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
            ++     +         + F +  A  G++G  F      ++     F   II  +  +
Sbjct: 204 QDRVTAGLMGIDSNRMISATFLIGGALGGVSGVLFGMKFGTVNAYS-GFDPGIIAFTAAV 262

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM-VIALFLVIL 333
           LGG+ S+        +L  +  L    N     + +    + +  +  +   I L L+++
Sbjct: 263 LGGIGSIPGAVLGGLLLGVIQNLIGVTNVLGSITGIANLAAIDASYQRIGAFIVLVLILI 322

Query: 334 MRSHSLLR 341
            +   LL 
Sbjct: 323 FKPTGLLG 330


>gi|221639725|ref|YP_002525987.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
 gi|221160506|gb|ACM01486.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
          Length = 410

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/353 (14%), Positives = 98/353 (27%), Gaps = 36/353 (10%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L     G             + L   + A  + +V G  G+LSL  +  +A+G Y   + 
Sbjct: 28  LASHAYGTAFLSTSFVKTLGKTLCLCLVALAMDLVWGYAGILSLGHMAFFALGGYMIGMW 87

Query: 85  GSRYGLSIWLL-------------------------------IPVSAMISGACGMIMGLP 113
                    ++                               +P     + +  + + L 
Sbjct: 88  LMYARTEDIVVQALSNAPLPATPQEISDGVASQIFGVVGGAELPAVWAFAHSLPLQLALV 147

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
            L      L    L        + +         A      +          L      P
Sbjct: 148 VLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALALHLFQNDAGLRGNNGLSGLQNIP 207

Query: 174 SSFVI----YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
               +      ++ ++   G   L   +  W+      +  R IRD+++    L  ++  
Sbjct: 208 GLVQVSQDRLSVWFFWASAGALALGYLLAAWIVSGKFGSVLRAIRDDEQRVRFLGYSVES 267

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            KL  F +++    +AGA +      I+P       +I +   V +GG   L       A
Sbjct: 268 YKLFIFTLTAVIAAIAGALYYPQAGIINPAELAPIASIYLAVWVAIGGRGRLYGAVIGAA 327

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +  +     G      +        +      L+ +A  LV L     +  L
Sbjct: 328 FVSLLSTWFTGGRAPDLSLGFA-TIQWVDWWQILLGLAFVLVTLFAPQGIGGL 379


>gi|167468153|ref|ZP_02332857.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis FV-1]
          Length = 146

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 15/149 (10%)

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  +  AW     ++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F
Sbjct: 1   MRMPLGRAWEAPSTDEIACRSLGLSSTKIKLTAFTISAAFAGFAGTLFAARQGFVSPESF 60

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F E+  V++IV+LGGM S   +  A  +L+   EL   +N Y                 
Sbjct: 61  TFVESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDLNAY---------------SM 105

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLE 350
            L+   + L+++ R   LL ++ P   L+
Sbjct: 106 LLLGALMVLMMIWRPQGLLPMKRPQLKLK 134


>gi|52550144|gb|AAU83993.1| branched-chain amino acid ABC transporter permease protein
           [uncultured archaeon GZfos35B7]
          Length = 303

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 113/299 (37%), Gaps = 13/299 (4%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            IY++ A GL+++ G + +++        +GAY+   + +   L+ +L+IP++ +I    
Sbjct: 18  CIYILLAIGLNLIFGVMKVVNFAHGELLMLGAYATFWIYTFSDLNPYLVIPLAMIILAIL 77

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G+ +     +       +  + +S     +      +        +              
Sbjct: 78  GVFIERLCFRPIMGTGKLNEIFLSLGLIYLFQNLAAVFWTTDSRSIHSPYSD-------- 129

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                     +   +    +++       ++ L++++  +  A R    N++A   +   
Sbjct: 130 ---VSITLGSINLPVDYILIIVITAICLIALQLFMKKATLGRAMRATSQNREAATLMGIN 186

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +    + +FA+ +AF   AG+    S   ++P +      I   ++VI+GG+ S+     
Sbjct: 187 VERMDMLSFALGAAFAATAGSLCLISGQMVNPYVGSI-PAIEAFAVVIIGGLGSIPGAII 245

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           A   L     +           LL  + SF+    T+  I L +V+++R   +   +  
Sbjct: 246 AGLTLGIAENIVPLFLQSSV-GLLGLEMSFSAWKDTIAFIILIIVLVIRPTGIFGEKEE 303


>gi|213691481|ref|YP_002322067.1| inner-membrane translocator [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|213522942|gb|ACJ51689.1| inner-membrane translocator [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|320457554|dbj|BAJ68175.1| branched-chain amino acid ABC transporter permease component
           [Bifidobacterium longum subsp. infantis ATCC 15697]
          Length = 307

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 104/303 (34%), Gaps = 13/303 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++        +GAY   +L     +++ L   V
Sbjct: 11  LFNGLKIGSVYALVALGYTMVYGIIRLINFAHGDFIMVGAYVL-MLTIPAIVAMGLPAWV 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +    + +G+   K     +      M+ +   I +        +           
Sbjct: 70  AVIPAVLVCVAVGVIVEKAAYKPVREKGNSMTALITAIAMSLLLENGSQ------AVFGA 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              TV ++          +         ++    + A + L+++ T    A R + ++++
Sbjct: 124 DFQTVPTIFHLPSIAFGKLKLPGDTLLTIVIGLVIMAGLQLFVKFTRQGKAMRAVSEDKE 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S    +A   + A+  ++S  M      +      +LGG+
Sbjct: 184 AAVLMGINVNSTIALTFAIGSGLAAVASLMYCAAYPQVS-PMMGAMLGLKAFVAAVLGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +  +  L           ++    S       ++   L +V+L++   
Sbjct: 243 GSIPGAMIGGLAIGLIESLTKAYIGTITGGIITSAFSDA-----IVFAILIIVLLVKPSG 297

Query: 339 LLR 341
           ++ 
Sbjct: 298 IMG 300


>gi|330879668|gb|EGH13817.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 391

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/353 (13%), Positives = 103/353 (29%), Gaps = 36/353 (10%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++ ++    L L +       +  +M  + L Y   A GL +  G  G+LSL   + + 
Sbjct: 13  GVIGLLILAALILLVFPLTLDAFRLNMIGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFG 72

Query: 76  IGAYSYVIL--------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           +G Y   +                +           ++ + +          S+      
Sbjct: 73  LGGYCMAMFLKLEASDPESTKIQSTPGIPDFMDWNQITELPALWVPFHSFTFSVFAVIAV 132

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVA--------DRLYFLGTTVRSLIRFFRFP 173
             +   I+        +     +     I +           L      +  L     + 
Sbjct: 133 PVLLAWIIGTALFKRRVGDVYFSIVTQAIALILTVLIIGQQGLTGGINGITDLKTLLGWD 192

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
                 ++ +Y+V  G+      I  ++  + +      +RD ++        +   K+ 
Sbjct: 193 IRSDGAKLALYFVNAGLLLGCILIGKFILASKLGRLLMAMRDKEERVRFSGYDVAGFKIF 252

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            + V++ F  + GA FA     +SP       +I ++    +GG  SL      + ++  
Sbjct: 253 VYCVAAGFSAIGGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGSLLVNY 312

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                             F  SF      LM      V++     L  L    
Sbjct: 313 GKTY--------------FSESFPELWLYLMGGLFIAVVMYFPDGLAGLWESH 351


>gi|317402683|gb|EFV83236.1| inner-membrane translocator [Achromobacter xylosoxidans C54]
          Length = 323

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 68/335 (20%), Positives = 138/335 (41%), Gaps = 30/335 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + +   IL  LA++  L LF  +       +  S   ++LIY + A  L++++G  G+++
Sbjct: 1   MMRTASILWTLALLAALALFPLVAPALGLDFYISFVRRVLIYALAATSLNLILGYGGMVA 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L     +  GAY+  IL      S  +  PV+ +++     I G  SL+ RG Y  + TL
Sbjct: 61  LGHAAFFGAGAYAVGILAMSGVTSALVSWPVAMLLAALLAFITGAISLRTRGVYFIMITL 120

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +++   I I  +                       +L  +   P   +  ++  YY++
Sbjct: 121 AFAQMLFYIFISLRQYGG---------------EDGLNLPGYSSLPGIDLANDVAFYYLV 165

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +  +   +   +  +    A + IR+N+    S+   +   KL+AF +S A  G+AGA
Sbjct: 166 LVIFAVMMWLFGRVTLSRFGTALQGIRENESRMESMGYPVYRIKLTAFTLSGAVAGLAGA 225

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A     ISP +  ++++  ++ +V++GG+           +++ + E+      Y+  
Sbjct: 226 LLANHNLFISPSLMHWTQSANLLIMVLVGGIGLRYGGVAGAVVMLVLEEVLRQWTEYWH- 284

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                           + + L  V+      L+ L
Sbjct: 285 --------------LPLGVLLLCVVFGAPRGLVGL 305


>gi|170694982|ref|ZP_02886131.1| inner-membrane translocator [Burkholderia graminis C4D1M]
 gi|170140080|gb|EDT08259.1| inner-membrane translocator [Burkholderia graminis C4D1M]
          Length = 440

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/321 (14%), Positives = 109/321 (33%), Gaps = 30/321 (9%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L+  + L          S+  QI I V FA   ++++G  G+LS    + +  GAY+  
Sbjct: 48  ALIAAIALPFIFPGTLGISVLTQICIAVTFALAFNMLLGGTGMLSFGHALYFGTGAYATA 107

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR--GDYLAIATLIMSEIFQNILIKW 140
              + +G ++ +++        A  +   +     R      A+ +L + ++  +     
Sbjct: 108 HFLNYFGEAVPVVLVPLVGGLAALLIGAFIALFTVRSGKVIFAMISLAVGQLAYSAATIM 167

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
              + G  GI +                            + +Y+++    +L+A  +  
Sbjct: 168 TGWSGGDEGIRLDPTQAAGW-------------GIDFGSPLAVYFLVAAWAWLAALAMHT 214

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             RT +       RDN +    +    +  +  A  +S+ F G+AGA +A +   ++ D 
Sbjct: 215 FTRTPLGRLMNATRDNAERMNFVGFDPVMIRGLALTLSAGFAGIAGALYALAFQVVTLDT 274

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              +++   +    +GG T+         ++  +      +   +               
Sbjct: 275 LSIAQSTNGMLHTYIGGHTTFLGPVVGAVLITVISAHLSALTDAWS-------------- 320

Query: 321 TTLMVIALFLVILMRSHSLLR 341
              + I    +++     L  
Sbjct: 321 -LYLGIFFVAIVVSMRRGLTG 340


>gi|153004538|ref|YP_001378863.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5]
 gi|152028111|gb|ABS25879.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5]
          Length = 314

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/321 (16%), Positives = 112/321 (34%), Gaps = 29/321 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
           +     + LG            + +L   +FA   ++++G  GLLS          AY  
Sbjct: 9   WAWAGLVLLGLVAPYLVYPVFAMNVLCLALFASAFNLLLGYAGLLSFGHAAFLGSAAYVT 68

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                 +GL   L +     ++   G++ G  +++  G Y A+ TL  +++   ++++  
Sbjct: 69  GYALRSWGLPTELGVLAGTAVATLLGLVFGALAIRRSGIYFAMITLGFAQLVYFLVVQLP 128

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
             T G+ G+    R                     +   + MYY + G       ++   
Sbjct: 129 W-TGGEDGLQGIPR-------------GRALGLIALDRPLTMYYFVFGAFLAGFWLVQRA 174

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +   +  R IR+N+    SL   +   KL AF +S+   G+AG+  A      S    
Sbjct: 175 IHSPFGHVLRAIRENEPRALSLGYDVPRYKLLAFVLSAGLSGLAGSLKAVVLQFASLSDV 234

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            +  +  V+ + +LGGM ++   +    +++ +      M                   T
Sbjct: 235 HWHRSGEVVLMTLLGGMGTVMGPSVGALLVLTLENYLADM---------------GSWVT 279

Query: 322 TLMVIALFLVILMRSHSLLRL 342
            +        +L     ++  
Sbjct: 280 VITGAVFVACVLAFRRGIVGE 300


>gi|52550145|gb|AAU83994.1| ABC-type branched-chain amino acid transport system permease
           component [uncultured archaeon GZfos35B7]
          Length = 317

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 61/309 (19%), Positives = 131/309 (42%), Gaps = 17/309 (5%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  +L FL       ++Y+ ++ I +L++ M++   +++  + G  SL     + IG Y 
Sbjct: 15  VTLILAFLLPLILGIKQYLLTVLILMLVFTMYSSAWNLLA-TSGQGSLGHAAFFGIGGYV 73

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             I+ + +GL + L I +    +   G+++GL  ++ +  +LA+ T   + I Q I ++ 
Sbjct: 74  SAIISNSFGLPVILTIVIGGFFAAVIGVLIGLTCVRLKAWFLAMVTFGFAIIAQTITVEL 133

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G  GI                      P + + + ++ YY++L +  +   II  
Sbjct: 134 SGLTGGWDGIPA----------------KKLVPVTIINHVMYEYYIILLIAVVVIVIIYL 177

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           + ++ +  A   IR+N+     +   +   KL AFA S+ F G+AGA        ++P++
Sbjct: 178 IMKSKMGLALEAIRENELEAKVMGINVTVYKLKAFAASAFFTGIAGALEIHHFGYVTPEV 237

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           +    +   I   + GG+ ++      T ++  + E+       Y   +L       +  
Sbjct: 238 YGIDISFWPIIYSVSGGLYTIGGPILGTVVITAIWEVLRSFGMTYGRFILIGLILILIVI 297

Query: 321 TTLMVIALF 329
                +   
Sbjct: 298 FLPKGLISI 306


>gi|149377829|ref|ZP_01895560.1| possible ABC transporter, permease protein precursor [Marinobacter
           algicola DG893]
 gi|149357887|gb|EDM46378.1| possible ABC transporter, permease protein precursor [Marinobacter
           algicola DG893]
          Length = 308

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/330 (16%), Positives = 114/330 (34%), Gaps = 29/330 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
              ++ L  G            + +L + +FA   ++++G  GLLS      +   AY  
Sbjct: 5   VLFIIMLVAGLGAPFYAYPVFVMDLLCFALFACAFNLLLGYAGLLSFGHAAFFGGAAYIT 64

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
             +   +G      I      +   G I G  +++ +G Y A+ TL +++I   + ++  
Sbjct: 65  GYVTKEWGFGPIFGILAGTGFALILGTIFGFLAIRRQGIYFAMVTLALAQIIYFLALQMP 124

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
             T G+ G+    R                F    +  EI MYY +  +  +  +II   
Sbjct: 125 -FTGGENGLQGIPR-------------GELFGFISLNNEIAMYYFVFAVFMIGFAIIHRT 170

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +      + IR+N+    SL   +   KL AF +S+   G AGA  A      +    
Sbjct: 171 INSPFGEVLQAIRENESRALSLGYDVDHFKLLAFIISATLAGTAGATKAVIFQFAALTNA 230

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            +  +  VI + ++GG+ ++         +  +                           
Sbjct: 231 HWQTSGEVILMTLVGGLGTIFGPVLGAITVGALSHELSAF---------------GSWVQ 275

Query: 322 TLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            ++     + +++    ++         ++
Sbjct: 276 VILGTVFVVCVMVFRRGIVGEIQHRLLKKK 305


>gi|118592797|ref|ZP_01550186.1| ABC transporter permease protein [Stappia aggregata IAM 12614]
 gi|118434567|gb|EAV41219.1| ABC transporter permease protein [Stappia aggregata IAM 12614]
          Length = 340

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 64/329 (19%), Positives = 118/329 (35%), Gaps = 30/329 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
                   +L+ L      + +    +  +I +Y+  A   +++ G  GL+S+       
Sbjct: 19  VAAVAGVLVLIVLVSAPLWAGRADMRLLSEIFLYLSLACLWNLLAGYAGLVSVGQQAFVG 78

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            G Y    L    GLS    IP++ ++     + + L   + RG Y AI T +++E+F+ 
Sbjct: 79  FGGYMLFALAIFAGLSPLAAIPLAGLLGAVIAVPVALLIFRLRGAYFAIGTWVIAEVFRL 138

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
              +   +  G               T   +       SS  + E   Y++ L M  +  
Sbjct: 139 SFAQVSALGGGSG-------------TSLPVAIVRDMASSRSMREATTYWLALAMAVIVL 185

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           ++I  L R+    A   IRD++ A  S    I   K   + +++    M GA     + R
Sbjct: 186 AVIYLLLRSRNGLALTAIRDSELASESFGIDIWRNKFVVYVLTAGLTAMTGALIFLQKLR 245

Query: 256 ISPDMFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           ISPD           VI IV++GG+ +L        +   + E    +            
Sbjct: 246 ISPDAAFSVNDWTAFVIFIVVIGGIGTLEGPIIGVIVFFLLRETLSDL------------ 293

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 +  ++ +    V+L     L   
Sbjct: 294 ---GTVYLLILGVVAIAVMLKAPKGLWGT 319


>gi|316932516|ref|YP_004107498.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315600230|gb|ADU42765.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 332

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/301 (15%), Positives = 108/301 (35%), Gaps = 26/301 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  I+++        L +V G  G+ +L     + + AY+             L++ + 
Sbjct: 41  LAFLIRVIGLAFLVISLDLVTGFCGVATLGHAALFGVAAYAAGNACLAGITDPILMLLIG 100

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           A+   A G++ G+   +FRG    + ++   ++   +  K   IT G  G+         
Sbjct: 101 AVAGAATGLMSGVLVTRFRGLPQLVLSIAFGQLVAALANKLSSITGGSDGLAGISPGPVF 160

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G              +F ++    Y   + +  ++  ++L   R+  +   R I+D+   
Sbjct: 161 GI------------FNFDMFGRTGYVFSVVVLLITMVLLLRFARSPFALMCRAIKDDTLR 208

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +  ++    +  + V+    G+ GA  A +   +  D   F  +   + ++ILGG  
Sbjct: 209 TRMIGVSVYPRLVVMYCVAGVVAGIGGALTAINTGVVGLDSVSFERSAEALIMLILGGAG 268

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           +L        +           + +++                L+ + L +V+L     L
Sbjct: 269 NLWGALIGAILFELFHHYVSAASPFHW--------------MILIGVLLIVVVLFFPKGL 314

Query: 340 L 340
           +
Sbjct: 315 V 315


>gi|296136849|ref|YP_003644091.1| inner-membrane translocator [Thiomonas intermedia K12]
 gi|295796971|gb|ADG31761.1| inner-membrane translocator [Thiomonas intermedia K12]
          Length = 310

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 101/305 (33%), Gaps = 7/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G + L++        +GA +   +          L   
Sbjct: 8   IVNGLVLGSMYALIALGYTMVYGIVNLINFAHGDVMMVGALTAYTVFKVLDHVAPHLPGW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      ++    L +  + +A   L  +      LI    ++     + +      
Sbjct: 68  LVVVIALIIAMLATGVLNYFIERIAYRPLRNAPKLAP-LITAIGMSILLETLAMIIWGRD 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L+         ++       +L+    L A +   +  T +  A R   +N +
Sbjct: 127 YKVFPSGLLPSNVINVGGIVITPVQIMILIVTAVLLAGLTWLINHTKLGRAMRATAENPR 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +     F   SAF + +    +AG  + A+    +  M  F+  +   +  +LGG+
Sbjct: 187 VASLMGVNPNFVISSAFVIGAMLAAIAGVMWFANFATANFYM-GFTPGLKAFTAAVLGGI 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +LS       +L  +  L  G        +       +        I L LV+ +R   
Sbjct: 246 GNLSGAMLGGILLGLIEVLGAGYIGTLTGGVFG-----SNYQDIFAFIVLILVLTLRPQG 300

Query: 339 LLRLR 343
           LL  R
Sbjct: 301 LLGER 305


>gi|237808382|ref|YP_002892822.1| urea ABC transporter, permease protein UrtC [Tolumonas auensis DSM
           9187]
 gi|237500643|gb|ACQ93236.1| urea ABC transporter, permease protein UrtC [Tolumonas auensis DSM
           9187]
          Length = 360

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/350 (14%), Positives = 108/350 (30%), Gaps = 33/350 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             ++  + VV   LL     A        ++  + L Y + A  L +V G LG+LSL   
Sbjct: 18  AILIGSVLVVLSNLLLPHDSALYVGSNTVTLLGKYLCYALLAVALDLVWGYLGILSLGHG 77

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +A+G Y+  +   R   +  +                 LP   +  ++   A L++  
Sbjct: 78  AFFALGGYAMGMYLMRQIGTRGVYGDPVLPDFMVFLNWHELPWFWYGMNHFWFAMLMVVL 137

Query: 132 IFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRF 172
           +   +   +  +                          +  +  +     +        F
Sbjct: 138 VPGLLAFVFGWLAFRSRVTGVYLSIMTQAMTYALLLAFFRNEMGFGGNNGLTDFKDIIGF 197

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
             +       ++ +   +  L+  +   +  + +      IRD +     +   + + KL
Sbjct: 198 SLTDDATRAALFLITAVVLCLAYLVCRVIVGSKLGRVAVAIRDAEMRTRFMGYRVEYFKL 257

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
           + F  S+   G+AGA +      I+P  F    +I ++  V +GG  +L        ++ 
Sbjct: 258 AIFVFSAMLAGVAGALYVPQVGIINPGEFSPLNSIELVIWVAVGGRATLYGAVVGAILVN 317

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +  G+                      +     LV L     +  L
Sbjct: 318 YAKSVFTGI--------------LPDEWLYALGALFVLVTLFLPKGVTGL 353


>gi|237806914|ref|YP_002891354.1| inner-membrane translocator [Tolumonas auensis DSM 9187]
 gi|237499175|gb|ACQ91768.1| inner-membrane translocator [Tolumonas auensis DSM 9187]
          Length = 306

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 90/304 (29%), Gaps = 15/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +       +
Sbjct: 12  LLNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYIGFMVITALMMMGIDSSVL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +    +++      +  + +A   L  S     ++         +  +  A     
Sbjct: 72  LMGAAFIVSILITS-CYGWSIERVAYRPLRGSNRLIPLISAIGMSIFLQNLVRFAQGSRD 130

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +             P +          + +        +  ++ R+ +  A R   ++ K
Sbjct: 131 IAMPSLVQGGIEFGPGNAASLSYMQIIIFVVTFISMYGLSKFISRSRMGRACRACAEDIK 190

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG         I+     F   +   +  +LGG+
Sbjct: 191 MANLLGIDTNSVIALTFVIGAALASIAGILLGLYYGVIN-PSLGFMAGLKAFTAAVLGGI 249

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL     L        +  ++ F               L  ++L+    
Sbjct: 250 GSIPGAMIGGLILGVTEALTSAYLSSEYKDVVAFG-------------LLIAILLLMPTG 296

Query: 339 LLRL 342
           +L  
Sbjct: 297 ILGR 300


>gi|76812256|ref|YP_331612.1| putative branched-chain amino acid ABC transporter integral
           membrane subunit [Burkholderia pseudomallei 1710b]
 gi|121598218|ref|YP_994652.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei SAVP1]
 gi|124384763|ref|YP_001027585.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei NCTC 10229]
 gi|126439804|ref|YP_001060981.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 668]
 gi|126450283|ref|YP_001082517.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei NCTC 10247]
 gi|126454800|ref|YP_001068281.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 1106a]
 gi|134281573|ref|ZP_01768281.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 305]
 gi|167001270|ref|ZP_02267069.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei PRL-20]
 gi|167721844|ref|ZP_02405080.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei DM98]
 gi|167740814|ref|ZP_02413588.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 14]
 gi|167847911|ref|ZP_02473419.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei B7210]
 gi|167896468|ref|ZP_02483870.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 7894]
 gi|167904870|ref|ZP_02492075.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei NCTC 13177]
 gi|167913148|ref|ZP_02500239.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 112]
 gi|167921085|ref|ZP_02508176.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei BCC215]
 gi|217423923|ref|ZP_03455423.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 576]
 gi|238561555|ref|ZP_00441823.2| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia mallei GB8 horse 4]
 gi|242315707|ref|ZP_04814723.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 1106b]
 gi|254174884|ref|ZP_04881545.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei ATCC 10399]
 gi|254184043|ref|ZP_04890634.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 1655]
 gi|254201519|ref|ZP_04907883.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei FMH]
 gi|254206857|ref|ZP_04913208.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei JHU]
 gi|254259459|ref|ZP_04950513.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 1710a]
 gi|254357411|ref|ZP_04973685.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei 2002721280]
 gi|76581709|gb|ABA51184.1| putative branched-chain amino acid ABC transporter integral
           membrane subunit [Burkholderia pseudomallei 1710b]
 gi|121227028|gb|ABM49546.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei SAVP1]
 gi|124292783|gb|ABN02052.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei NCTC 10229]
 gi|126219297|gb|ABN82803.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 668]
 gi|126228442|gb|ABN91982.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 1106a]
 gi|126243153|gb|ABO06246.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei NCTC 10247]
 gi|134247240|gb|EBA47326.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 305]
 gi|147747413|gb|EDK54489.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei FMH]
 gi|147752399|gb|EDK59465.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei JHU]
 gi|148026475|gb|EDK84560.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei 2002721280]
 gi|160695929|gb|EDP85899.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei ATCC 10399]
 gi|184214575|gb|EDU11618.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 1655]
 gi|217392986|gb|EEC33008.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 576]
 gi|238524322|gb|EEP87755.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia mallei GB8 horse 4]
 gi|242138946|gb|EES25348.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 1106b]
 gi|243062893|gb|EES45079.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei PRL-20]
 gi|254218148|gb|EET07532.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 1710a]
          Length = 324

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 122/302 (40%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS    +  A   Y         G +  L +     
Sbjct: 26  FVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGTAPELGVLAGTA 85

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+++GL +++ +G Y A+ TL  +++   I ++                      
Sbjct: 86  AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 131

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  ++ +YYV+L +   +   I+ +  +        I++N+    
Sbjct: 132 GLQGVPRGRLFGLVDLSSDLALYYVVLVVIACACFFIVRIVHSPFGQVLVAIKENEPRAI 191

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+A  G+AGA         +     ++ + +V+ + ++GGM +L
Sbjct: 192 SLGYDTDRFKLLAFILSAALAGLAGALKVVVLGFETLSDAYWTMSGLVVLMTLVGGMGTL 251

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSL-LKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +    +  +  +   + +  S     T +  +   + +L     ++
Sbjct: 252 FGPLVGAALIVALEDRLGDIGGWLASVTHIDWFRSLGESATIVTGLIFIVCVLAFRRGIV 311

Query: 341 RL 342
             
Sbjct: 312 GE 313


>gi|289625275|ref|ZP_06458229.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289647801|ref|ZP_06479144.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. aesculi str. 2250]
          Length = 529

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAVIGMA 315

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 491

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526


>gi|271966104|ref|YP_003340300.1| inner-membrane translocator [Streptosporangium roseum DSM 43021]
 gi|270509279|gb|ACZ87557.1| inner-membrane translocator [Streptosporangium roseum DSM 43021]
          Length = 348

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/310 (17%), Positives = 122/310 (39%), Gaps = 29/310 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
              +  Y +     ++   +   G+ ++ G  G ++L     + IGAY      +    +
Sbjct: 38  PFNASPYTNLQLTLVIALAVAIRGIDVLTGYAGQVTLGQSAFFGIGAYVGAYGFAHGWPA 97

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           +   + ++ ++    G+I+ +P+++ RG    + TL +  +   + I+ + +T G  G  
Sbjct: 98  V-GGLLLAPILCAVAGVIVAIPAVRLRGFAFGVITLALPVVVVPLAIRLEGVTGGAVG-- 154

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                        ++        S +  + + Y ++L +  +   +   L    +  A  
Sbjct: 155 ------------LAVSTISAPSWSGLADDQWQYLLVLAIGAVMFLLARNLLAGRVGRALT 202

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            IR ++ A  S+   +   K+ AFA++SA+ G+AG  +  +   I  D    + +I ++ 
Sbjct: 203 LIRTSEIAASSVGIPVQRYKILAFAIASAYGGVAGWLYLTAVRYIGVDSLALTLSISMLV 262

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
            +++GG+ S        A  I V  +               D +   R      +AL +V
Sbjct: 263 ALVVGGVRSPLGCVIGAAFYILVPNIT--------------DRATPGRSALFFGVALLIV 308

Query: 332 ILMRSHSLLR 341
           +LM    +  
Sbjct: 309 LLMVPGGISG 318


>gi|213691027|ref|YP_002321613.1| inner-membrane translocator [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|213522488|gb|ACJ51235.1| inner-membrane translocator [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|320457081|dbj|BAJ67702.1| ABC transporter permease component [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 371

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 56/335 (16%), Positives = 105/335 (31%), Gaps = 34/335 (10%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
              +  + L  T    Y   +  + L Y M A G+ +  G  G+L+L   + + +GAY  
Sbjct: 18  IAAVALIILAPTVMSAYSLGLLSKYLCYAMVAVGIGLAWGQGGMLTLGQGLFFGLGAYVM 77

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            I      L    +      ++      +      FR   + I  + +        + W 
Sbjct: 78  AIHLKIEELGPDAVPD---FMAQYGIDRLPGFWELFRNPVVTIIGVAVVPGAVAAALGWA 134

Query: 142 PITNGKAGIYVA-----------------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
               G  G Y A                  +       +     FF +  +    +  +Y
Sbjct: 135 VFGRGVRGAYFAILSQALVAAFAVLLVGQSKTTGGTNGLNDFSGFFGYDLTDPANKRMIY 194

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y+          I  W+R + +      +RD +     L       K+  F++++ F G+
Sbjct: 195 YICAFCVLGMVLIADWIRHSFMGELIIGVRDQENRMKFLGYNPASIKVFTFSLAAVFAGI 254

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            GA F      ISP       +I++++ V++GG ++L      T I+             
Sbjct: 255 GGAMFVPVVGIISPSDIDVIPSIMMLAGVVIGGRSTLLGPVIGTLIIRFAETQLSEACPS 314

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
            +  +                    LVI      L
Sbjct: 315 VWTYVE--------------GAIFILVIAFAPMGL 335


>gi|327191583|gb|EGE58595.1| ribose ABC transporter [Rhizobium etli CNPAF512]
          Length = 417

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/323 (12%), Positives = 98/323 (30%), Gaps = 23/323 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R++  +  + +  V+  +          + +    + +QI I  + A G++ V+   G 
Sbjct: 98  IRISMKEAGVAIALVLIVIFFSATAPYFATPENFLKIFVQIAINTVLASGMTFVILVGG- 156

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+       +     LS W  I ++++ S   G I+G  +           
Sbjct: 157 IDLSVGSLLALCTVIGATIMIDPRLSPWAAIVLASLASMGTGAILGAINGWV-------- 208

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                    + ++    +        V      +    +  + F       +   IF+  
Sbjct: 209 --CEKWKLPSFIVTLGMLNVASGLARVVSDNSTITGLPQPFVDFGNLIFWGIFPSIFLIA 266

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +++ +           R T        I  N++A           K++ F +S    G+A
Sbjct: 267 IVVVLVGWFVL-----RYTVFGRFVFAIGTNEEAVRLSGHEPKRYKIAVFTISGLTAGIA 321

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCC 299
              +    + +   +      +  I+ VI+GG        S+        IL  +     
Sbjct: 322 AMVYLLRLN-VGSPVAGIGYELNAIAAVIIGGTSLSGGKGSIVGTLVGACILQVLSTGLQ 380

Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322
            +        +       +    
Sbjct: 381 LLGADDNIKPIVIGAVIVLAVIL 403


>gi|294341018|emb|CAZ89413.1| High-affinity branched-chain amino acid transport system permease
           protein livH (LIV-I protein H) [Thiomonas sp. 3As]
          Length = 310

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 102/305 (33%), Gaps = 7/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G + L++        +GA +   +          L   
Sbjct: 8   IVNGLVLGSMYALIALGYTMVYGIVNLINFAHGDVMMVGALTAYTVFKVLDHVAPHLPGW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      ++   +L +  + +A   L  +      LI    ++     + +      
Sbjct: 68  LVVVIALIIAMLATGALNYFIERIAYRPLRNAPKLAP-LITAIGMSILLETLAMIIWGRD 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L+         ++       +L+    L A +   +  T +  A R   +N +
Sbjct: 127 YKVFPSGLLPSNVINVGGIVITPVQIMILIVTAVLLAGLTWLINHTKLGRAMRATAENPR 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +     F   SAF + +    +AG  + A+    +  M  F+  +   +  +LGG+
Sbjct: 187 VASLMGVNPNFVISSAFVIGAMLAAIAGVMWFANFATANFYM-GFTPGLKAFTAAVLGGI 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +LS       +L  +  L  G        +       +        I L LV+ +R   
Sbjct: 246 GNLSGAMLGGILLGLIEVLGAGYIGTLTGGVFG-----SNYQDIFAFIVLILVLTLRPQG 300

Query: 339 LLRLR 343
           LL  R
Sbjct: 301 LLGER 305


>gi|158315382|ref|YP_001507890.1| ABC transporter related [Frankia sp. EAN1pec]
 gi|158110787|gb|ABW12984.1| ABC transporter related [Frankia sp. EAN1pec]
          Length = 873

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 95/269 (35%), Gaps = 13/269 (4%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y          Y +    + ++ G  G+ S+     +AIGAY+     +     + 
Sbjct: 29  LIPAYQTYSLALAATYAVLVLSVGLLAGWAGVWSVGHPALFAIGAYTAAYGSAHGWG-LE 87

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + +  +  ++G CG  +G    +F   Y+A+ TL  S +   ++ +W  +T G  G+ V 
Sbjct: 88  VTVLAAMALAGTCGAFLGFAGARFSVLYIALLTLAFSLVALEVINRWTGVTGGDQGVPVL 147

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
           +    LG             ++ V   + +    L             R   +       
Sbjct: 148 ELSSVLGLGSLGGGSAEAIDAAIVTAGVMLTVAALA------------RPMGLRMRMVAA 195

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           + +  A  S+          AF  S A  G+AG   A     +SP+ F     I  I+  
Sbjct: 196 KSHPLAARSIGIAPEAQTALAFGASGAAAGLAGVLLALITGYVSPESFSLVFGINTIAAA 255

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMN 302
           +LGG+ +++      A +     L   + 
Sbjct: 256 VLGGVGTIAGAVVGGAFMAWSPTLADDIG 284


>gi|256157389|ref|ZP_05455307.1| hypothetical protein BcetM4_00796 [Brucella ceti M490/95/1]
 gi|256253632|ref|ZP_05459168.1| hypothetical protein BcetB_04939 [Brucella ceti B1/94]
 gi|261220769|ref|ZP_05935050.1| inner-membrane translocator [Brucella ceti B1/94]
 gi|265995875|ref|ZP_06108432.1| inner-membrane translocator [Brucella ceti M490/95/1]
 gi|260919353|gb|EEX86006.1| inner-membrane translocator [Brucella ceti B1/94]
 gi|262550172|gb|EEZ06333.1| inner-membrane translocator [Brucella ceti M490/95/1]
          Length = 331

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 130/337 (38%), Gaps = 33/337 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +   L+  +         +     +++L + +FA   ++++G  G+LS      +
Sbjct: 25  LSAIVLGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGYAAFF 80

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              AY        +G+S  L + +  + + A G+++G  +++ +G Y  + TL ++++F 
Sbjct: 81  GGAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              ++                       ++ + R F F    +   + MYY +L +  L 
Sbjct: 141 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              I  +  +      +++R+N+    SL  ++   KL+AF +S+   G+AG   A    
Sbjct: 187 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 246

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             +     +  +  VI + +LGG+ +L       A ++ +       +F           
Sbjct: 247 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 297

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 T +  +     +L+    ++     S   ++
Sbjct: 298 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 328


>gi|84683938|ref|ZP_01011840.1| branched-chain amino acid ABC transporter, permease protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84667691|gb|EAQ14159.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 409

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/366 (14%), Positives = 111/366 (30%), Gaps = 36/366 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +  +L +  +    +   F     S  ++ ++G + L   + A  + ++ G  G+LSL  
Sbjct: 15  FLAVLAVFTIAITFMSEAFGAGVISTSFVKTLG-KTLCLALVAVAMDLIWGYAGILSLGH 73

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVS-----------------AMISGACGMIMGLP 113
              + +G Y   +          +   ++                  +          + 
Sbjct: 74  FAFFGLGGYMIGMWLMYERTKEIVAGSMAGNPIPPTEQEIVDGIGTQIFGVVGSSEFPII 133

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY-----------------VADRL 156
            +     +L +A +++      ++  W    +   G+Y                   D  
Sbjct: 134 WMFADSLFLQLALVVLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLYLFQNDSG 193

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +  L       +S     I+ ++       +      W+      +  R IRDN
Sbjct: 194 LRGNNGLSGLQNLPGVTASQDFVSIWFFWASALALAVGYIFAAWIVSGKFGSVIRGIRDN 253

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +     L  ++   KL  F V++   G+AGA +      I+P       +I +   V +G
Sbjct: 254 EARVRFLGYSVEGYKLFLFTVTAMIAGIAGALYYPQAGIINPAEIAPIASIYLAVWVAIG 313

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G   L         +  V     G      N    +   +    T L+ ++   V L   
Sbjct: 314 GRGRLYGAVIGAVFVSLVSTFFTGGQAPDINLGF-YTIQWVDWWTILLGLSFVFVTLFAP 372

Query: 337 HSLLRL 342
             +  L
Sbjct: 373 KGIGGL 378


>gi|271501423|ref|YP_003334448.1| inner-membrane translocator [Dickeya dadantii Ech586]
 gi|270344978|gb|ACZ77743.1| inner-membrane translocator [Dickeya dadantii Ech586]
          Length = 295

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 61/312 (19%), Positives = 121/312 (38%), Gaps = 19/312 (6%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            +++  +     IY + A  L++  G  GLL+   ++    GAY+  +    +GL +WL+
Sbjct: 2   SEFLLHILCLGGIYAIVALALNLQAGYAGLLNFGHIVFVGTGAYAIGLGS-HFGLPLWLV 60

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           IP   + +    ++M L   +   DY  IATL ++EI +  ++    +T G  GI     
Sbjct: 61  IPGGLLCALVISVLMTLLGRQLTADYWGIATLALAEIIRIAVVNEDRLTGGAQGIGGLSA 120

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                V        ++L    ++    L +  +    A R +R+
Sbjct: 121 P--------------WSTGDTVADTRIFAVIILLCVIIATLASLRIGTSRFGRALRLMRE 166

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
             +    +   +++ K  A   S+    +AG   A   D +SPD    SE  ++ S+V++
Sbjct: 167 QPQLAICMGYALLWLKCRALMSSAVMCCLAGMLLAWYTDYVSPDYLLSSETFLIWSMVMI 226

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++  +     ++ G+         Y+  S               +++ L    L R
Sbjct: 227 GGIGNVRGVLLGVLLVEGLYNFIPFAKDYFQISSDLTGALRLGLVGLALLLCL----LTR 282

Query: 336 SHSLLRLRTPSN 347
              LL  +  + 
Sbjct: 283 PGGLLPEKLRTL 294


>gi|158339064|ref|YP_001520241.1| branched chain amino acid ABC transporter permease [Acaryochloris
           marina MBIC11017]
 gi|158309305|gb|ABW30922.1| branched chain amino acid ABC transporter, permease protein
           [Acaryochloris marina MBIC11017]
          Length = 368

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 95/306 (31%), Gaps = 17/306 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L+ V    LL   +       +  S+  ++L++      L +V G  G+LS    + + +
Sbjct: 17  LVVVSGISLLIFTILPFTLNSFQLSLMSKLLLFGTLGVSLDLVWGFTGILSFAHGVFFTL 76

Query: 77  GAYSYVILGSR-------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G Y+                        +W  +                    F    L 
Sbjct: 77  GGYASAYYLKLNLSAASNTYGGELPDFMVWNGLEKLPWFIAPLKHFPVALVATFAVPALF 136

Query: 124 IATLIMSEIFQNI----LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
              +        +    +       +     +   +  + G T               + 
Sbjct: 137 AYIIGYFIFRSKVSGVYITIITLAISSALTTFFISQQAYTGGTNGITDVSSLRFFGVQVK 196

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
            I +Y+++L       ++  +L ++      R+I +N+K    L   +   K+  + +S+
Sbjct: 197 PIGLYFLILAYAAFVIALSWFLTQSNFGLILRSINENEKRISFLGYDVAQFKIFIWTLSA 256

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  G+AG  F      ISP     +    V+  V +GG  S+     A  +L  V     
Sbjct: 257 AIAGVAGGLFVPLNRFISPVYLAVAFGTQVVIWVAIGGRGSIVGPLVAAILLGQVQNYAE 316

Query: 300 GMNFYY 305
            +   +
Sbjct: 317 KVTQDW 322


>gi|302386473|ref|YP_003822295.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
 gi|302197101|gb|ADL04672.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
          Length = 294

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 99/307 (32%), Gaps = 23/307 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +      +Y + A G ++V G   +L+        IG Y    + S  GL     I
Sbjct: 6   SYFINGLSLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGGYVVFTVVSTMGLGPVAGI 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ ++    G+++   + +       +A LI +     +L     +  G         +
Sbjct: 66  LLAVILCTVLGVVIEGVAYRPLRMASPLAVLITAIGVSYLLQNIALLVFGSNPKSFTSVV 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +             +         ++    +   +  +++RT    A   + ++
Sbjct: 126 TVPALKLSE---------GKLTISGETIVTIISCVIIMVGLTAFIKRTRAGQAMLAVSED 176

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ SA   +AGA   ++   ++P        I      + G
Sbjct: 177 KGAAQLMGINVDGTIALTFAIGSALAAVAGALLCSAYPTLTPYT-GSMPGIKAFVAAVFG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        +L  +  L         +  + F               L +V+L++ 
Sbjct: 236 GIGSIPGAFIGGLLLGVIENLSKAYISSQLSDAIVFG-------------VLIVVLLVKP 282

Query: 337 HSLLRLR 343
             +L  +
Sbjct: 283 TGILGKK 289


>gi|296447074|ref|ZP_06889007.1| urea ABC transporter, permease protein UrtC [Methylosinus
           trichosporium OB3b]
 gi|296255419|gb|EFH02513.1| urea ABC transporter, permease protein UrtC [Methylosinus
           trichosporium OB3b]
          Length = 380

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/342 (14%), Positives = 100/342 (29%), Gaps = 23/342 (6%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDS-----MGIQILIYVMFAWGLSIVVGSLGL 65
           +       AV++ +  F  L   ++     S     +  ++  Y M A  + +V G  G+
Sbjct: 20  WCAFALGAAVIFIVAPFANLATAEASMLHLSDASIALAGKLFCYAMLALAMDLVWGYAGI 79

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSI---------------WLLIPVSAMISGACGMIM 110
           LSL   + +A+G Y++ +   R                    W   P     +      +
Sbjct: 80  LSLGHGVFFALGGYAFGMYLMRQIGHDGSYHADLPDFMVFLDWKAFPWFWAFTDHFAYAI 139

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
            L  L       A          + +           A + +  R             F 
Sbjct: 140 ALAILAPAALAFAFGFFAFRSRIKGVYFSIITQALTYAMMLLFFRNETGFGGNNGFTDFK 199

Query: 171 RFPSSFVIYEIFMYYVLL---GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
           R     +        + +       L   +  ++  + +      IR+ +          
Sbjct: 200 RILDYPLATPQTRIILFMLSGASLLLLLLVSRFIVTSKLGRVLTAIREAESRVMFCGYDT 259

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
           +  KL+ +  S+A  G+AGA +      I+P     + +I +     +GG  +L      
Sbjct: 260 LSYKLAIWTFSAAICGLAGALYVPQVGIINPSEMSPAASIEIAIWTAVGGRGTLIGPLVG 319

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             ++ G   L       Y+   L              VI L 
Sbjct: 320 AVVVNGAKSLFTAAIPEYWLFFLGLLFVLVTLLLPKGVIGLV 361


>gi|213969636|ref|ZP_03397772.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301384778|ref|ZP_07233196.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302130816|ref|ZP_07256806.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213925732|gb|EEB59291.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
          Length = 391

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/353 (13%), Positives = 103/353 (29%), Gaps = 36/353 (10%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++ ++    L L +       +  +M  + L Y   A GL +  G  G+LSL   + + 
Sbjct: 13  GVIGLLILAALILLVFPLTLDAFRLNMIGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFG 72

Query: 76  IGAYSYVIL--------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           +G Y   +                +           ++ + +          S+      
Sbjct: 73  LGGYCMAMFLKLEASDPQSTKIQSTPGIPDFMDWNQITELPALWVPFHSFTFSVFAVIAV 132

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVA--------DRLYFLGTTVRSLIRFFRFP 173
             +   I+        +     +     I +           L      +  +     + 
Sbjct: 133 PVLLAWIIGTALFKRRVGDVYFSIVTQAIALILTVLIIGQQGLTGGINGITDIKTLLGWD 192

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
                 ++ +Y+V  G+      I  ++  + +      +RD ++        +   K+ 
Sbjct: 193 IRSDGAKLALYFVNAGLLLGCILIGKFILASKLGRLLMAMRDKEERVRFSGYDVAGFKIF 252

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            + V++ F  + GA FA     +SP       +I ++    +GG  SL      + ++  
Sbjct: 253 VYCVAAGFSAIGGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGSLLVNY 312

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                             F  SF      LM      V++     L  L    
Sbjct: 313 GKTY--------------FSESFPELWLYLMGGLFIAVVMYFPDGLAGLWESH 351


>gi|170723795|ref|YP_001751483.1| urea ABC transporter permease UrtB [Pseudomonas putida W619]
 gi|169761798|gb|ACA75114.1| urea ABC transporter, permease protein UrtB [Pseudomonas putida
           W619]
          Length = 495

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 222 ITFGLLGVINMAHGEMLMLGAYSTYMVQVLLQRYAPGAIEFYPLIALPVAFAVSAGVGMA 281

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         I +      +  +  + +         +
Sbjct: 282 LER--TVIRHLYGRPLETLLATWGISLMLIQAIRLLFGAQNVEVSNPAWLSGGIQLLPNL 339

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++     +     L L RT +    R +  N+        +     + AF +
Sbjct: 340 VLPYNRLVIIAFALAVVLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVSTGRVDMLAFGL 399

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    +L
Sbjct: 400 GSGIAGLGGV--ALSQVGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSLWAAFGLGIANKL 457

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 458 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 492


>gi|77463870|ref|YP_353374.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|77388288|gb|ABA79473.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
          Length = 410

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/353 (14%), Positives = 98/353 (27%), Gaps = 36/353 (10%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L     G             + L   + A  + +V G  G+LSL  +  +A+G Y   + 
Sbjct: 28  LASHAYGTAFLSTSFVKTLGKTLCLCLVALAMDLVWGYAGILSLGHMAFFALGGYMIGMW 87

Query: 85  GSRYGLSIWLL-------------------------------IPVSAMISGACGMIMGLP 113
                    ++                               +P     + +  + + L 
Sbjct: 88  LMYARTEDIVVQALSNAPLPATPQEISDGVASQIFGVVGGAELPAVWAFAHSLPLQLALV 147

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
            L      L    L        + +         A      +          L      P
Sbjct: 148 VLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALALHLFQNDAGLRGNNGLSGLQNIP 207

Query: 174 SSFVI----YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
               +      ++ ++   G   L   +  W+      +  R IRD+++    L  ++  
Sbjct: 208 GLVQVSQDRLSVWFFWASAGALALGYLLAAWIVSGKFGSVLRAIRDDEQRVRFLGYSVEG 267

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            KL  F +++    +AGA +      I+P       +I +   V +GG   L       A
Sbjct: 268 YKLFIFTLTAVIAAIAGALYYPQAGIINPAELAPIASIYLAVWVAIGGRGRLYGAVIGAA 327

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +  +     G      +        +      L+ +A  LV L     +  L
Sbjct: 328 FVSLLSTWFTGGRAPDLSLGFA-TIQWVDWWQILLGLAFVLVTLFAPQGIGGL 379


>gi|49481170|ref|YP_036102.1| branched chain amino acid ABC transporter permease [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|229090951|ref|ZP_04222175.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus Rock3-42]
 gi|301053495|ref|YP_003791706.1| branched chain amino acid ABC transporter permease [Bacillus
           anthracis CI]
 gi|49332726|gb|AAT63372.1| branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|228692352|gb|EEL46087.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus Rock3-42]
 gi|300375664|gb|ADK04568.1| branched chain amino acid ABC transporter, permease [Bacillus
           cereus biovar anthracis str. CI]
          Length = 333

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 60/325 (18%), Positives = 129/325 (39%), Gaps = 31/325 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 15  VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  R      + ++ I  + +IS     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 75  VALLFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YYV L    +   +
Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L  +    
Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
            R T ++ +   +V+L+    L+  
Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGT 311


>gi|320330449|gb|EFW86428.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 529

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 77/288 (26%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G  G++++       +GAYS  ++           I    +I+      +       
Sbjct: 256 ITFGLPGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 315

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 491

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526


>gi|298488924|ref|ZP_07006948.1| Urea ABC transporter, permease protein UrtB [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|298156599|gb|EFH97695.1| Urea ABC transporter, permease protein UrtB [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
          Length = 529

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAVIGMA 315

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 491

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526


>gi|170699138|ref|ZP_02890192.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
 gi|170135933|gb|EDT04207.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
          Length = 358

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 105/302 (34%), Gaps = 12/302 (3%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             + +   +       Y  S     LI  +      ++ G  G+L+L     + +GAY +
Sbjct: 30  VAIAVAAVILPLCLGSYQLSTVRDALIMGLLGLSYDLLWGRAGVLTLGHTTFFGLGAYGF 89

Query: 82  VILGSRYGLSIWLLIPVSAMISGAC--GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
            +  +++G +  + + V  + + +    +   L     R  + AI ++ +  I Q +   
Sbjct: 90  AVATTQFGQTPAIGLVVGVICAMSVAAMLGYFLLFAGVRLHFFAIISMAVLIIAQQLATS 149

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W+ +T G  G+     L F                  +      +Y +  +  +  S+  
Sbjct: 150 WQSVTGGDTGMLSIPGLSFTLAGYT----------VDLSGPRASWYAVATVLLVGLSVTW 199

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           +  R+        I  N+    +      +  L  F VS+    +AGA  AA    ++PD
Sbjct: 200 FACRSQYGKILAAIATNEWRAQACGYHTSWHLLRVFVVSAGMAAIAGALMAACSGVVAPD 259

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +F       VI  V +GG  +L     A   L    +     +  ++  +L       + 
Sbjct: 260 VFSPVLATEVILWVAVGGRGTLGGPVAAAVALTLFKQSVSSFSTEWWPLMLAALFLGCIL 319

Query: 320 HT 321
             
Sbjct: 320 FL 321


>gi|172060386|ref|YP_001808038.1| inner-membrane translocator [Burkholderia ambifaria MC40-6]
 gi|171992903|gb|ACB63822.1| inner-membrane translocator [Burkholderia ambifaria MC40-6]
          Length = 408

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/293 (18%), Positives = 99/293 (33%), Gaps = 12/293 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            V                 +     Q    V+ A   ++ +G+ GLLS        +GA+
Sbjct: 12  WVLFAACVALPAWLWPHGAMLGYLAQTAALVVLALSYNLQLGTTGLLSFGHAAYAGLGAF 71

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +     +  G  + LL  V  +     G I GL + +  G   A+ TL ++E        
Sbjct: 72  AAAHWFNHVGGLLPLLPLVGGVAGAGFGFIAGLLATRRAGTVFAMITLGLAECVAAAAWS 131

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                 G  G+ +                   +           Y V+   C +SA  + 
Sbjct: 132 VPAWFGGLGGVPI------------DRASGTPWGGWHFGAPAQAYTVIAAWCIVSAMAMH 179

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L RT ++     +RDN     +L T     +L+    +S F G+AG       +  +PD
Sbjct: 180 ALTRTPLARLANAVRDNPARVAALGTEPRRVRLAMVTCASFFAGIAGTLTLIDVEIATPD 239

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
               + +  V+   ++GG  +    A    +L  +  +  G++  +   L   
Sbjct: 240 SLSMARSATVLIAAVIGGTGTFFGPAAGAVVLTALSVVVAGVSRAWALYLGVL 292


>gi|319762511|ref|YP_004126448.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|330825639|ref|YP_004388942.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317117072|gb|ADU99560.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|329311011|gb|AEB85426.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 322

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 57/313 (18%), Positives = 115/313 (36%), Gaps = 30/313 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 + +  +     I+ +FA G   V G+LG++S        +G Y+  +   +YGL
Sbjct: 22  PFLHPGEALIQLVTLAAIWAIFAIGFDFVFGALGMVSFGHATFLGVGGYAVALATQKYGL 81

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-IKWKPITNGKAG 149
                + ++ ++  A  ++    +L+  G + A+ TL +S++   +   K +  T G  G
Sbjct: 82  PFSAGVGLAVIVGAAFALLFSFFALRVSGIFFALVTLALSQLIFILADSKLRGFTGGSDG 141

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           I   +R                F        +  Y+ +LG+  L    ++ LR +     
Sbjct: 142 ISGVERP--------------GFLGIDFYDPVHYYWFVLGVYALVMLAVISLRSSPFGRV 187

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              IR N+     L   +   K   F +S    G+AGA  A+    ++P M  ++ +  V
Sbjct: 188 IAAIRGNETRADQLGFNVNRYKQITFVISGGLSGLAGALLASLLMYMNPQMLHWTTSGDV 247

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           I + ++GG  SL            + E       Y++                ++ +   
Sbjct: 248 IIMTLVGGSGSLWGATVGVIAFEVLKEWLSSWTEYWYG---------------VLGLVFI 292

Query: 330 LVILMRSHSLLRL 342
           L  +     ++  
Sbjct: 293 LATIFFPRGIVGE 305


>gi|297571277|ref|YP_003697051.1| inner-membrane translocator [Arcanobacterium haemolyticum DSM
           20595]
 gi|296931624|gb|ADH92432.1| inner-membrane translocator [Arcanobacterium haemolyticum DSM
           20595]
          Length = 552

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/325 (9%), Positives = 89/325 (27%), Gaps = 9/325 (2%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F L+   Y  I+ +   +  L          + + + ++  Q    +  A G++ ++   
Sbjct: 222 FLLKNGLYIVIVLIFIALAILAPITKSVDLFTTQNVLNILQQASPRMFLALGVAGLILLT 281

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G   L+      +G     ++  +   +    +   A       +   +           
Sbjct: 282 G-TDLSIGRMVGMGMVIATVIMHKGPNTG--SVFGYAFDFTWMPLSGRIIFALIACIIAT 338

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
               +++  F         ++     + +   + +    V         P+  V      
Sbjct: 339 TLFTMIAGFFTARFKMHPFVSTMANMLIIFGLVTYATKGVSFGAIEPDIPNMIVPNVSGF 398

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
             ++L     +  +     +T        +  N +A      ++    + AF ++    G
Sbjct: 399 PTIILWAVAATVVVWFIWNKTTFGKNLYAVGGNPEAAAVSGISVFKVTMGAFILAGILYG 458

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVEL 297
                 AA         +    ++  I+  ++      GG+  +S +     I  G+   
Sbjct: 459 FGSWLEAARMFGSGSAAYGQGWDMDAIAACVVGGVSFTGGIGRISGVVVGVMIFTGLTYS 518

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTT 322
              +        +          T 
Sbjct: 519 LTILGIDTNLQFVFEGIIILAAVTL 543


>gi|6690694|gb|AAF24262.1| Orf410 [Rhodobacter sphaeroides]
          Length = 410

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/332 (14%), Positives = 95/332 (28%), Gaps = 36/332 (10%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL---------- 95
            L   + A  + +V G  G+LSL  +  +A+G Y   +          ++          
Sbjct: 49  TLCLCLVALAMDLVWGYAGILSLGHMAFFALGGYMIGMWLMYARTEDIVVQALSNAPLPA 108

Query: 96  ---------------------IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
                                +P     + +  + + L  L      L    L       
Sbjct: 109 TPQEISDGVASQIFGVVGGAELPAVWAFAHSLPLQLALVVLVPGLLALVFGWLAFRSRVT 168

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI----YEIFMYYVLLGM 190
            + +         A      +          L      P    +      ++ ++   G 
Sbjct: 169 GVYLSILTQAMTLALALHLFQNDAGLRGNNGLSGLQNIPGLVQVSQDRLSVWFFWASAGA 228

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L   +  W+      +  R IRD+++    L  ++   KL  F +++    +AGA + 
Sbjct: 229 LALGYLLAAWIVSGKFGSVLRAIRDDEQRVRFLGYSVEGYKLFIFTLTAVIAAIAGALYY 288

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                I+P       +I +   V +GG   L       A +  +     G      +   
Sbjct: 289 PQAGIINPAELAPIASIYLAVWVAIGGRGRLYGAVIGAAFVSLLSTWFTGGRAPDLSLGF 348

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                +      L+ +A  LV L     +  L
Sbjct: 349 A-TIQWVDWWQILLGLAFVLVTLFAPQGIGGL 379


>gi|331017301|gb|EGH97357.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 391

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/353 (13%), Positives = 103/353 (29%), Gaps = 36/353 (10%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++ ++    L L +       +  +M  + L Y   A GL +  G  G+LSL   + + 
Sbjct: 13  GVIGLLILAALILLVFPLTLDAFRLNMIGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFG 72

Query: 76  IGAYSYVIL--------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           +G Y   +                +           ++ + +          S+      
Sbjct: 73  LGGYCIAMFLKLEASDPESTKIQSTPGIPDFMDWNQITELPALWVPFHSFTFSVFAVIAV 132

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVA--------DRLYFLGTTVRSLIRFFRFP 173
             +   I+        +     +     I +           L      +  L     + 
Sbjct: 133 PVLLAWIIGTALFKRRVGDVYFSIVTQAIALILTVLIIGQQGLTGGINGITDLKTLLGWD 192

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
                 ++ +Y+V  G+      I  ++  + +      +RD ++        +   K+ 
Sbjct: 193 IRSDGAKLALYFVNAGLLLGCILIGKFILASKLGRLLMAMRDKEERVRFSGYDVAGFKIF 252

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            + V++ F  + GA FA     +SP       +I ++    +GG  SL      + ++  
Sbjct: 253 VYCVAAGFSAIGGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGSLLVNY 312

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                             F  SF      LM      V++     L  L    
Sbjct: 313 GKTY--------------FSESFPELWLYLMGGLFIAVVMYFPDGLAGLWESH 351


>gi|329917231|ref|ZP_08276455.1| ABC-type transporter, permease component: HAAT family
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327544598|gb|EGF30078.1| ABC-type transporter, permease component: HAAT family
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 387

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 66/325 (20%), Positives = 137/325 (42%), Gaps = 20/325 (6%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           +   + A  ++ +   M   +L+Y     GL++  G  G+ +      + IG+Y+  ++ 
Sbjct: 79  ILALVAAFYNEHFALLMICTVLLYTTACLGLTLQFGFSGVANFAGAAFFGIGSYTTAVMV 138

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           +  G+   L+I +S +++   G ++ LP L+ RG Y A+ T+    +     I+   +  
Sbjct: 139 THTGVPHLLVIVLSGLMAALIGSLLILPVLRTRGHYAALVTIAF-GLLFKTFIEVNDVLG 197

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G  G+ V     F           F        + +    + + M      I+  L R+ 
Sbjct: 198 GPQGLQVPGMKLFGLAFNDG----FSLFGIDFSFYVSYALLSVAMAAGVFVIVKALERSW 253

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           I  +   +R ++ A  +    I   K+ AF + + F G+AG+ +A     ++P+ F F++
Sbjct: 254 IGLSMDVVRTDETAAATFGLHIARWKVVAFMMGNFFAGIAGSVYAMLMGFVAPNNFTFAD 313

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           +++++SIVILGG+ +   +  A  I++ + E    +  Y                     
Sbjct: 314 SLLMLSIVILGGLGNPLGLIPAAIIVLVLPEKLQFIQEY---------------RYLFYG 358

Query: 326 IALFLVILMRSHSLLRLRTPSNFLE 350
           + +  ++L R   LL  +T   F  
Sbjct: 359 VLVIAILLFRPDGLLPRKTRLFFQR 383


>gi|257483303|ref|ZP_05637344.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 529

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 315

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 374 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 491

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526


>gi|33593706|ref|NP_881350.1| putative ABC transport protein, inner membrane component
           [Bordetella pertussis Tohama I]
 gi|33563779|emb|CAE43021.1| putative ABC transport protein, inner membrane component
           [Bordetella pertussis Tohama I]
 gi|332383109|gb|AEE67956.1| putative ABC transport protein, inner membrane component
           [Bordetella pertussis CS]
          Length = 309

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 97/305 (31%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A G ++V G +GL++        IGA +  ++ +            
Sbjct: 8   IINGLTLGSVYALVALGYTMVYGIIGLINFAHGDVVMIGAMAATMVAAALVGGDPSTSAF 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +G   ++     +        +A   +    +   +      +             
Sbjct: 68  AVLGAGL--LVSVPLCMAVGWTAERVAYRPLRRAPRLAALITAIGVSIILQNVAMMVWGR 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  ++    F        +    +++    +  +++L + +T +  A R    N++
Sbjct: 126 NYLNFPQVLTPTVFEIGGARMSMLQIAIVVIAALIMGALLLVVHKTRLGTAMRATAQNRE 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   I     +AF + SA   +AG         +S     F   +   +  +LGG+
Sbjct: 186 VAGLMGVNINTVISAAFLIGSALAAIAGMMVTTYYG-VSQYTMGFMLGLKAFTAAVLGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L  +  L  G         L      +        + L +V++ R   
Sbjct: 245 GNLVGAMAGGLLLGIIESLGSGYIGDLTGGFLG-----SHYQDVFAFVVLVMVLIFRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|187476699|ref|YP_784722.1| branched-chain amino acid ABC transporter permease [Bordetella
           avium 197N]
 gi|115421285|emb|CAJ47790.1| putative branched-chain amino acid ABC transporter permease
           [Bordetella avium 197N]
          Length = 354

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 81/343 (23%), Positives = 139/343 (40%), Gaps = 23/343 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +R ++      L  ++   + F+ + A  S   + ++ I  LI  + A GL+I+VG
Sbjct: 18  QIFPIRQDR------LFFLLLMAVAFVAVPALASDYLLRAILIPFLILALAAVGLNILVG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
             G +SL      A+GAY+   I     G  + L I +    +   G++ G+PSL+ RG 
Sbjct: 72  YCGQISLGTGAFMAVGAYAAWNIGVRFPGAPLLLQILIGGGFATLVGIVFGIPSLRIRGL 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ TL          ++    TN  +   V+                       V   
Sbjct: 132 YLAVTTLAAQFFIDWAFLRIPFFTNYSSSGNVSVPPLTAF-------------GIPVQSA 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y  +L +  +   +   L R AI   W  IRD   A   +    ++AKLSAFAVSS 
Sbjct: 179 LEKYLFVLILVVVFTLLAKNLVRGAIGRQWMAIRDMDVAAAVIGIRPVYAKLSAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            +G+AGA +         P  F  + +  ++ ++I+GG+ S+       A ++ V     
Sbjct: 239 IVGVAGALWGFIHLGSWEPLAFDLNRSFQLLFMIIIGGLGSIIGSFFGAAFIVLVPVALT 298

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +   +   L     +       +    +   ++   H L RL
Sbjct: 299 NV--PHLLGLTLSVDTAAHIEHMVFGALIVFFLIAEPHGLARL 339


>gi|320160699|ref|YP_004173923.1| branched-chain amino acid ABC transporter permease protein
           [Anaerolinea thermophila UNI-1]
 gi|319994552|dbj|BAJ63323.1| branched-chain amino acid ABC transporter permease protein
           [Anaerolinea thermophila UNI-1]
          Length = 375

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/353 (13%), Positives = 107/353 (30%), Gaps = 40/353 (11%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             ++ L   L    +   + + +      +Y + A G ++V G + L++      + +GA
Sbjct: 34  VAIWRLGNALLENPSLFLQQVTNGLQIGFVYALIALGYTMVYGIVRLINFAHGDVFMVGA 93

Query: 79  YSYVILGSRYGLSIW--------------------LLIPVSAMISGACGMIMGLPSLKFR 118
           ++     SR  L +W                    +++    + +     I  +     R
Sbjct: 94  FTSFYAISRMQLHLWPRVLFPNLNPFLGDAIGTVTVVLLSMVVCALLAVTIERVAYKPLR 153

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF------ 172
                 A +    +   +           A      R + + T V               
Sbjct: 154 NAPRISALITAIGVSFFLEYFGALNFVYTANYITYRRPFDVVTWVIGNQGVQVLQRGQEV 213

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
           P   +I+    + +++    L   +  +++ T    A R    +++    +   +     
Sbjct: 214 PPGAIIFSNISFIIIIVSIILLVLLQYFVKNTRTGKAMRATAYDRQTARLMGVDVDATIS 273

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
           + FA+ +A  G AG  +A +  ++   M      +      +LGG+ S+        IL 
Sbjct: 274 TTFAIGAALAGAAGVLYAIAYPQVVFWM-GIIPGLKAFVAAVLGGIGSIPGAVVGALILG 332

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
               L            + F               L +V+L+R   +      
Sbjct: 333 QAETLSAAYISTPMRDAIAFS-------------ILIIVLLVRPTGIFGEAQR 372


>gi|309781875|ref|ZP_07676608.1| urea ABC transporter, permease protein UrtC [Ralstonia sp.
           5_7_47FAA]
 gi|308919516|gb|EFP65180.1| urea ABC transporter, permease protein UrtC [Ralstonia sp.
           5_7_47FAA]
          Length = 389

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/357 (13%), Positives = 97/357 (27%), Gaps = 32/357 (8%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            ++  +      LL           Y  ++  +I+ Y + A  L +V G  G+LSL   +
Sbjct: 29  SLIVCIGAPVCALLVPEGSPLHLSAYALTLVGKIMCYALAALALDLVWGYCGILSLGHGL 88

Query: 73  AYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
            +A+G Y   +                                          +++ L  
Sbjct: 89  FFALGGYGMGMYLMRSIGREGVYKSDLPDFMVFLDWKELPWFWHGTEHFAWAMLLVILVP 148

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
                 +   A     +     +I            +  +  +          R   FP 
Sbjct: 149 GVLAWLFGFFAFRSRVKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGFPI 208

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
           S +     ++        L+      +  +        IRD +          +  KL  
Sbjct: 209 SALPTRTVLFVATFVALVLAFIACRAIVTSKFGRVVTAIRDAEARVMFSGYNPLGYKLFV 268

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           +  S+   G+AGA +      I+P       +I +   V +GG  +L        ++ G 
Sbjct: 269 WTFSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAVWVAVGGRGTLIGPIIGAFLVNGA 328

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             L                         ++     LV L   + +L L +     +R
Sbjct: 329 KTLLTAW--------------VPEYWLFVLGAIFVLVTLYLPNGVLGLMSKLRMKKR 371


>gi|77456817|ref|YP_346322.1| inner-membrane translocator [Pseudomonas fluorescens Pf0-1]
 gi|77380820|gb|ABA72333.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 500

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++   +       I    +I+      +       
Sbjct: 227 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMFQRYAPQAIEFYPLIALPVAFFVTAAIGMA 286

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      +     + +         +
Sbjct: 287 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRLVFGAQNVEVANPAWLSGGIQVLPNL 344

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 345 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRVDMLAFGL 404

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 405 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVFAAFGLGIANKI 462

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 463 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 497


>gi|163798044|ref|ZP_02191984.1| acyl-CoA synthase [alpha proteobacterium BAL199]
 gi|159176701|gb|EDP61274.1| acyl-CoA synthase [alpha proteobacterium BAL199]
          Length = 337

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 98/282 (34%), Gaps = 20/282 (7%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +G      +       I    + A  L++++G  GL+S      +A+G Y + +L     
Sbjct: 24  IGFGVDSAWPRDFLTSIFAIGLLAMSLNLLIGYTGLVSFGHAAFFALGGYIFGLLLQWGD 83

Query: 90  LS-------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
            +       + + +  +   +    +++G   ++    Y A  TL       ++++ W  
Sbjct: 84  FTATLGQGSVPVALLAAVAGTALYALVIGAICVRLTEIYFAFLTLAFQMFLYSVILSWVA 143

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G             +   I    F    +      Y     +  +   I+  + 
Sbjct: 144 LTGGDQG-------------LMGGIPRPVFLGVDLADPYHRYAFCAVIFVICMLIMRIVT 190

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            +      R IRDN +    L   +   KL  F VSS+  G+ G   A       P+   
Sbjct: 191 ESPFGYTLRMIRDNAQRAAFLGVNVTRVKLICFVVSSSIAGVGGVILALFTSGAYPEWAF 250

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           ++++   I +++LGG+            L  + ++      +
Sbjct: 251 WAQSGEAIFMIMLGGLNVFLGPLLGAVALRILNDVVQMYTSH 292


>gi|160879407|ref|YP_001558375.1| inner-membrane translocator [Clostridium phytofermentans ISDg]
 gi|160428073|gb|ABX41636.1| inner-membrane translocator [Clostridium phytofermentans ISDg]
          Length = 291

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 105/306 (34%), Gaps = 26/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     + Y + A G S+V G L L++ +    YA GA++ ++L S     +  ++  
Sbjct: 6   IFNGLTLGMCYALLAVGYSLVFGILRLVNFSHGSIYAFGAHTALLLVSMNLGIVPAVLLS 65

Query: 99  SAMISGACGMIMGLPSLKFRGDY-LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
                    +I        R    + IA+LI +    NI+     +  G           
Sbjct: 66  LVFTGLLGVLIDKTALEPLRKKNSIPIASLITTIGISNIIQNLLTVFFGSE--------- 116

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                  +L  F       +        + +    L   ++L +++T I  A R    N 
Sbjct: 117 --KKAFPALFNFGVISIGNIQITWTQICICIVSLGLMLLLVLVVKKTKIGLAMRGCEQNP 174

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           KA   +   + F     F +      +AGA  +     + P+M   +  +   +  +LGG
Sbjct: 175 KAANLMGVNVNFVISFTFFLGGVSAAIAGALISGYYQIVYPNMGYMA-GLKAFAAAVLGG 233

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        ++     +        +   + F             + L +V+++R +
Sbjct: 234 IGSIPGALVGGLLVGVSESMAATFLGSTYRDCMAF-------------VILIIVLIVRPN 280

Query: 338 SLLRLR 343
            L   +
Sbjct: 281 GLFGKK 286


>gi|77464866|ref|YP_354370.1| branched chain amino acid ABC transporter inner membrane protein
           [Rhodobacter sphaeroides 2.4.1]
 gi|77389284|gb|ABA80469.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Rhodobacter sphaeroides 2.4.1]
          Length = 310

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 66/326 (20%), Positives = 116/326 (35%), Gaps = 28/326 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +LA+   +L  +         Y  +   +IL+   +A G +I  G  GLLSL   + +A 
Sbjct: 3   MLALHLAVLAGIAALQFVLPAYHHTNAARILVLATYAIGFNIAFGYTGLLSLGHALFFAG 62

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G Y+  +L  + G   W  +    +  G     +GL +L+  G    I TL+ ++ F   
Sbjct: 63  GMYATGLLIDQGGWQPWAALLAGPVAGGVLAAGVGLLALRTAGPAFMIVTLMFAQAFHLA 122

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           ++ W   T G  G                     R     +      Y     +   +  
Sbjct: 123 ILYWGRFTGGDEG-------------FTLSGAARRIGPFDLADPTTRYGAAFLLFAAAML 169

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
             L L R+        +R+N++    L      AKL A A+S    G AGA +      +
Sbjct: 170 GCLALVRSRTGRVLIAVRENEERTRMLGYDTFRAKLLALALSGLLSGAAGATYGLMFGYV 229

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
                    +I+ +  V+LGG  ++      TA+L  +++    +               
Sbjct: 230 GGSFAAIQYSILPLIWVLLGGAGTVLGPLLGTALLFYLIDWASSV--------------- 274

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
                 ++   L L++L     LL L
Sbjct: 275 TTASQFVVGAVLILLVLFAPRGLLGL 300


>gi|311109347|ref|YP_003982200.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310764036|gb|ADP19485.1| inner-membrane translocator 68 [Achromobacter xylosoxidans A8]
          Length = 354

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 80/343 (23%), Positives = 139/343 (40%), Gaps = 23/343 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF +R ++      +   +   + F+ + A  S   + ++ I  LI  + A GL+I+VG
Sbjct: 18  QIFPIRQDR------IFIWLLLAVAFVAIPAMASDYLLRAILIPFLILALAAVGLNILVG 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-WLLIPVSAMISGACGMIMGLPSLKFRGD 120
             G +SL      A+GAY+    G R+      + I +    +   G+I G+PSL+ RG 
Sbjct: 72  YCGQISLGTGAFMAVGAYAAWNFGVRFPGMPLIIQILLGGFFATIVGVIFGIPSLRIRGL 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           YLA+ATL          ++    TN  +   V+                       V   
Sbjct: 132 YLAVATLAAQFFVDWAFLRIPFFTNYSSSGNVSVPPLTAF-------------GLPVQSA 178

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y  +L +  + + +   L R AI   W  IRD   A   +    ++AKL+AFAVSS 
Sbjct: 179 LEKYLFVLILVVVFSLLAKNLVRGAIGRQWMAIRDMDVAASVIGIRPMYAKLTAFAVSSF 238

Query: 241 FIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
            +G+AGA +         P  F  + +  ++ +VI+GG+ S+       A ++ V     
Sbjct: 239 IVGVAGALWGYIHLGSWEPLAFDLTRSFQLLFMVIIGGLGSIIGSFFGAAFIVLVPVALS 298

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +       +     +       +    +   ++   H L RL
Sbjct: 299 NIPHAL--GIPLSVDTAAHIEHMVFGALIVFFLIAEPHGLARL 339


>gi|293603966|ref|ZP_06686380.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292817659|gb|EFF76726.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 327

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 120/302 (39%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             ++I+ Y +FA   ++++G  GLLS          AY+       +G    + +     
Sbjct: 27  FAMKIMCYALFACAFNLLLGFTGLLSFGHAAFLGSAAYAAGHAMKVWGFPTEIGLLFGVG 86

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           ++   G+ MG  +++  G Y A+ TL ++++     ++    T G+ G+    R      
Sbjct: 87  VAALLGLAMGAIAIRRSGIYFAMITLALAQMVFFFFLQA-KFTGGEDGLQSVPRGT---- 141

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                          +  +I +YY+++ +  +   II     +      + +R+N+    
Sbjct: 142 ---------LLGLVDLSKDINLYYLVMAIFVIGYFIIWRTVNSPFGQVLQALRENEPRAI 192

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   KL AF +S+A  G+AGA         +     +  + +VI + ++GG+ +L
Sbjct: 193 SLGYDVDRFKLLAFVLSAALAGLAGATKTLVFVSATLSDATWQMSGLVILMTLIGGLGTL 252

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +       I++ +            N + +++        T ++ +   + +L     ++
Sbjct: 253 TGPILGAFIVVLLENKVGDFGQMMANLTGVEWFLRLGESVTIVIGLIFVICVLAFRRGIV 312

Query: 341 RL 342
             
Sbjct: 313 GE 314


>gi|291457342|ref|ZP_06596732.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Bifidobacterium breve DSM 20213]
 gi|291381177|gb|EFE88695.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Bifidobacterium breve DSM 20213]
          Length = 307

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 103/303 (33%), Gaps = 13/303 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++        +GAY   +L     +++ L   V
Sbjct: 11  LFNGLKIGSVYALVALGYTMVYGIIRLINFAHGDFIMVGAYVL-MLTIPAIVAMGLPAWV 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +    + +G+   K     +      M+ +   I +        +           
Sbjct: 70  AVIPAILVCVAVGVIVEKAAYKPVREKGNSMTALITAIAMSLLLENGSQ------AIFGA 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              TV ++          +         ++    +   + L+++ T    A R + ++++
Sbjct: 124 DFQTVPTIFHLPSIAFGKLKLSGDTLLTIVIGLVIMVGLQLFVKFTKQGKAMRAVSEDKE 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S    +A   + A+  ++S  M      +      +LGG+
Sbjct: 184 AAVLMGVNVNSTIALTFAIGSGLAAVASLMYCAAYPQVS-PMMGAMLGLKAFVAAVLGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +  +  L           L+    S       ++   L +V+L++   
Sbjct: 243 GSIPGAMIGGLAIGLIESLTKAYIGTVTGGLITSAFSDA-----IVFAILIIVLLVKPSG 297

Query: 339 LLR 341
           ++ 
Sbjct: 298 IMG 300


>gi|297194985|ref|ZP_06912383.1| high-affinity branched-chain amino acid transporter [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197721907|gb|EDY65815.1| high-affinity branched-chain amino acid transporter [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 338

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 88/310 (28%), Gaps = 18/310 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+    +   +Y + A G ++V G L L++      + +GAY  +I+            
Sbjct: 39  DYLVLGVMLGSLYAVIAIGYTLVYGVLQLINFAHSEVFMLGAYGSLIVLQLVSPGDNPSA 98

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             S            L           +A   +       LI           +Y     
Sbjct: 99  LASIGFVALAMAGSALFGGVTAYGLEKVAYRPLRRRGAPRLIFLITAIGASFFLYNLAGK 158

Query: 157 YFLGTTVRSLIRFFR---FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            F    +     +     F        I           +  ++ + + RT +    R +
Sbjct: 159 LFGRDPLPLPEMYDNHTVFSLFGAGVNITQMLQFATAVVMMVALDMLVTRTKLGKGIRAV 218

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             + +    +   I       F +     G+AG  FA            F   I   +  
Sbjct: 219 AQDAEVAGLMGVDIDKVISRTFIIGGVLGGVAGFLFANLNQV--SYTMGFIPGITAFAAA 276

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ++GG+ ++        ++  V  +   +    + S+                + L LV++
Sbjct: 277 VVGGIGNIRGAMFGGILIGIVETMTVPLLGDEWRSVSAM-------------VVLILVLM 323

Query: 334 MRSHSLLRLR 343
            R   +L  R
Sbjct: 324 FRPMGILGER 333


>gi|229820691|ref|YP_002882217.1| inner-membrane translocator [Beutenbergia cavernae DSM 12333]
 gi|229566604|gb|ACQ80455.1| inner-membrane translocator [Beutenbergia cavernae DSM 12333]
          Length = 328

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 61/304 (20%), Positives = 113/304 (37%), Gaps = 8/304 (2%)

Query: 54  WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113
            GL+I  G  GL+++       +GAY + I        +W  + V+        +I+GLP
Sbjct: 27  IGLNIHFGLTGLINMGQAGFMLVGAYGFGISTIAGWP-LWAAVLVAIGSGVVFALILGLP 85

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIK--WKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           +LK RGDYLAI T+  +EI + +      + IT    G+      +            + 
Sbjct: 86  TLKLRGDYLAIVTIAAAEIVRLVGRSTALEDITGASNGLLGNSFKHTFQGASPFPDERWT 145

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSA----SIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
           F    +       + L  + +        ++  L R+      + IR+++ A  SL   +
Sbjct: 146 FLFLTLPVNASNSWWLRIVGWTLVALACFLVYLLIRSPWGRVLKGIREDEDAVRSLGKNV 205

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
              K+ A  +      +AG  F      I PD           +I++LGG  ++      
Sbjct: 206 YSYKMQALVLGGGLGALAGIIFVLP-GAIQPDSLGRPVTFYTWTILLLGGAATVFGPVLG 264

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
           + +  G +    G+        +            L+ I L L+++ R   +L  +    
Sbjct: 265 SMLFWGTLVFVRGLMRGVIPEQVMSVIEIEQFGWVLVGITLMLLVIFRPQGILGDKKELA 324

Query: 348 FLER 351
             +R
Sbjct: 325 IHDR 328


>gi|301631673|ref|XP_002944922.1| PREDICTED: hypothetical protein LOC100491990 [Xenopus (Silurana)
            tropicalis]
          Length = 2211

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 98/308 (31%), Gaps = 23/308 (7%)

Query: 18   LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
            L +       L +    S   +  +        M A  +++ V   G + L+    +A+ 
Sbjct: 1252 LTIAVFAAFALVIPGFASLASLRQLSTSFAEQAMVAVAMAVSV-LSGGIDLSVGAVFAMA 1310

Query: 78   AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +  +       + + L++P   +   A G + G      R     + TL+M  + + + 
Sbjct: 1311 NFLTLYTYLVKDMPLPLVVPGVVLFGAAMGAVNGALIAYGRTRPF-LTTLVMLIVLRALY 1369

Query: 138  IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
             K+  +T         D   +                S +     M  +LL        +
Sbjct: 1370 NKFTAVTTDALASVAPDSPVWDFL----------GAGSLLGVPTNMVALLLIALSSHFFL 1419

Query: 198  ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
                 R         +  ++KA       +      A+ +S A   +AG F+AA ++  S
Sbjct: 1420 ----TRLRPGVHIMAVGASRKAARHAGVNVQRTLFLAYVLSGALAALAGVFYAARQNS-S 1474

Query: 258  PDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                     I  ++ V+LGG+       ++++     AI+  +V     +      +   
Sbjct: 1475 GTDTGLGWEINALAAVVLGGISLAGGRGTIARAMMGAAIIFMLVSGLVRIGVSGNVTTAL 1534

Query: 312  FDCSFNMR 319
                  + 
Sbjct: 1535 LGLILLVA 1542



 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/329 (14%), Positives = 106/329 (32%), Gaps = 33/329 (10%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           + ++   +L + A+V+ L+    L    S   + ++   I I  + A G++IVV     L
Sbjct: 608 KPSQAMAVLGMCALVF-LVFSATLPGFLSLGNLLALSRNISILGVLALGMAIVV-IARGL 665

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+ V   A  A   VI+ +    +  + + +  +++ A G + G          L    
Sbjct: 666 DLSQVAVMACAAAVAVIVMNAGWPTP-VALALGLVMALAVGAVNGWLIAVVEMPPL---- 720

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
                           + +G A + +          V        F          +   
Sbjct: 721 -------------LTTLASGLAVLGLTRSTAVQHFVVNLGAGHEGFLQLGGNLPGGLPAP 767

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           L+    ++A + L L RT +        DN +             +  +A+ +A   +AG
Sbjct: 768 LVVFTIVAAGVHLLLSRTVLGRFIYAHGDNPETARLTGLPTRPLTMLEYALCAAIAYIAG 827

Query: 247 AFFAASRDRISPDMFKFSENII------VISIVILGGMTSLSKIAKATAILIGVVELCCG 300
               A    +   + + +          +  + + GG   +  +   T ++  ++     
Sbjct: 828 VVMVAQTALMHLQVAEGTLIFDVILVVVLGGVSLTGGRGHVGCVVVGTLLIGVLLNGMTI 887

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           M+       L       ++   L+   + 
Sbjct: 888 MD-------LDIQTQNIVKGMVLLGAIVL 909


>gi|326794845|ref|YP_004312665.1| ABC-type transporter integral membrane subunit [Marinomonas
           mediterranea MMB-1]
 gi|326545609|gb|ADZ90829.1| ABC-type transporter, integral membrane subunit [Marinomonas
           mediterranea MMB-1]
          Length = 322

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 61/303 (20%), Positives = 113/303 (37%), Gaps = 11/303 (3%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L   V+  L  L     +  +Y  +    I+I  +F   L  +VG  GL++L   + Y +
Sbjct: 10  LFVWVFFPLALLMPMLLEQNEYYVNKLTTIMILSIFVMSLDYLVGKCGLITLGHAMFYGL 69

Query: 77  GAYSYVILGSRYG-LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           G Y +V++   Y  ++ W+       IS     ++G   L+  G Y+ + TL  +++   
Sbjct: 70  GGYLFVMIAPEYEAVNFWVYTFYICAISSLVAFVIGFLVLRTSGIYMIMITLAFAQMTFY 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                     G  G++V  +              F      +      YY+ L   F S 
Sbjct: 130 YFSDSIDF-GGTDGVFVYVKPETS---------IFGLSLFDLDNPTHFYYLCLLSLFNSL 179

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L R+        I  N     +L   I   +L ++ ++SA    AG  F      
Sbjct: 180 LFFKVLIRSRFGRLVDAIHVNPGRTVALGYNIFVYRLVSYVIASALGAYAGYLFTLQYGF 239

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P M  ++ +   + + ILGGM S+      T +  G+  L   +  ++   +     +
Sbjct: 240 VNPSMLSWTTSGTALVMSILGGMGSIYGAILGTLVFEGLQYLLEHVTEHWLLFMGGLIIT 299

Query: 316 FNM 318
             M
Sbjct: 300 MVM 302


>gi|312958719|ref|ZP_07773239.1| inner-membrane translocator [Pseudomonas fluorescens WH6]
 gi|311287262|gb|EFQ65823.1| inner-membrane translocator [Pseudomonas fluorescens WH6]
          Length = 500

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++       +   I    +I+      +       
Sbjct: 227 ITFGLLGVINMAHGEMLMLGAYSTYVVQLLMQRYVPAAIEFYPLIALPVAFFVTAAIGMA 286

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      +       +         +
Sbjct: 287 LER--TVIRHLYGRPLETLLATWGISLMLIQLVRLVFGAQNVEVANPQWLSGGIQVLPNL 344

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 345 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRVDMLAFGL 404

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 405 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVTAAFGLGIANKI 462

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 463 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 497


>gi|23335566|ref|ZP_00120801.1| COG0559: Branched-chain amino acid ABC-type transport system,
           permease components [Bifidobacterium longum DJO10A]
 gi|23466260|ref|NP_696863.1| permease of ABC transporter for branched-chain amino acids
           [Bifidobacterium longum NCC2705]
 gi|189440754|ref|YP_001955835.1| branched-chain amino acid AbC-type transport system permease
           [Bifidobacterium longum DJO10A]
 gi|227546613|ref|ZP_03976662.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Bifidobacterium longum
           subsp. infantis ATCC 55813]
 gi|239621644|ref|ZP_04664675.1| permease of ABC transporter for branched-chain amino acids
           [Bifidobacterium longum subsp. infantis CCUG 52486]
 gi|312134007|ref|YP_004001346.1| livh [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482076|ref|ZP_07941100.1| branched-chain amino acid transport system/permease component
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|322689789|ref|YP_004209523.1| branched-chain amino acid ABC transporter permease [Bifidobacterium
           longum subsp. infantis 157F]
 gi|322691735|ref|YP_004221305.1| branched-chain amino acid ABC transporter permease [Bifidobacterium
           longum subsp. longum JCM 1217]
 gi|23327008|gb|AAN25499.1| permease of ABC transporter for branched-chain amino acids
           [Bifidobacterium longum NCC2705]
 gi|189429189|gb|ACD99337.1| Branched-chain amino acid ABC-type transport system permease
           component [Bifidobacterium longum DJO10A]
 gi|227212930|gb|EEI80809.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Bifidobacterium longum
           subsp. infantis ATCC 55813]
 gi|239515519|gb|EEQ55386.1| permease of ABC transporter for branched-chain amino acids
           [Bifidobacterium longum subsp. infantis CCUG 52486]
 gi|291516323|emb|CBK69939.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           (TC 3.A.1.4.-) [Bifidobacterium longum subsp. longum F8]
 gi|311773311|gb|ADQ02799.1| LivH [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916435|gb|EFV37833.1| branched-chain amino acid transport system/permease component
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456591|dbj|BAJ67213.1| branched-chain amino acid ABC transporter permease component
           [Bifidobacterium longum subsp. longum JCM 1217]
 gi|320461125|dbj|BAJ71745.1| branched-chain amino acid ABC transporter permease component
           [Bifidobacterium longum subsp. infantis 157F]
          Length = 308

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 103/303 (33%), Gaps = 13/303 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++        +GAY   +L     +++ L   V
Sbjct: 12  LFNGLKIGSVYALVALGYTMVYGIIRLINFAHGDFIMVGAYVL-MLTIPAIVAMGLPAWV 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +    + +G+   K     +      M+ +   I +        +           
Sbjct: 71  AVIPAILVCVAVGVIVEKAAYKPVREKGNSMTALITAIAMSLLLENGSQ------AIFGA 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              TV ++          +         ++    +   + L+++ T    A R + ++++
Sbjct: 125 DFQTVPTIFHLPSIAFGKLKLPGDTLLTIVIGLVIMVGLQLFVKFTRQGKAMRAVSEDKE 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S    +A   + A+  ++S  M      +      +LGG+
Sbjct: 185 AAVLMGINVNSTIALTFAIGSGLAAVASLMYCAAYPQVS-PMMGAMLGLKAFVAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +  +  L           ++    S       ++   L +V+L++   
Sbjct: 244 GSIPGAMIGGLAIGLIESLTKAYIGTITAGIITSAFSDA-----IVFAILIIVLLVKPSG 298

Query: 339 LLR 341
           ++ 
Sbjct: 299 IMG 301


>gi|320547327|ref|ZP_08041618.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus equinus
           ATCC 9812]
 gi|320448025|gb|EFW88777.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus equinus
           ATCC 9812]
          Length = 294

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 105/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   IY + A G ++V G + L++      Y +GA+      S   ++ W+ + V
Sbjct: 10  LVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFIGYYSISVLHMNFWIALIV 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++   GM++   + +       IA LI +      L        G            
Sbjct: 70  TMIVTAFIGMVIEFLAYRPLRHSTRIAALITAIGVSFFLEYGMVFLVGANTRS------- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +    +    V        +L     L  ++ L +++T +  A R +  +  
Sbjct: 123 ----FPQAVDIVSYKLGPVTVTNIQLLILAVSLVLMVALQLTVKKTKMGKAMRAVSVDSD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG       + I P M   +  I      +LGG+
Sbjct: 179 AAELMGINVNSTISFTFALGSALAGAAGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +  L   +N              +     ++   L +++L+R   
Sbjct: 238 GIIPGAALGGFVIGILETLSISLN-------------LSSYRDAIVYGVLIIILLVRPAG 284

Query: 339 LLR 341
           +L 
Sbjct: 285 ILG 287


>gi|299133678|ref|ZP_07026872.1| inner-membrane translocator [Afipia sp. 1NLS2]
 gi|298591514|gb|EFI51715.1| inner-membrane translocator [Afipia sp. 1NLS2]
          Length = 322

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/323 (16%), Positives = 117/323 (36%), Gaps = 29/323 (8%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V  +++ + L A           +Q L + +FA   ++++G  GLLS    +      Y
Sbjct: 20  IVGFIVMAVLLAAVPLTGIYPYFVMQALCFSLFACAFNLLIGYSGLLSFGHSMFLGTAGY 79

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                   +G+     I +    +    +I G  +++ +G Y A+ TL +S++   I ++
Sbjct: 80  FTAYSLKSWGVPPVAGILIGVFAAAVLSVITGAIAIRRQGIYFAMITLALSQLMFFIYLR 139

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
               T G+ GI    +    G    S                 +YY +L +  L+  +I 
Sbjct: 140 AP-FTGGEDGIQGIPQGTLFGIFDLSHTN-------------TLYYFILSVFLLAFLLIH 185

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +      ++IR+N+    SL   +   KL AF +S    G+AG+         S  
Sbjct: 186 RIVNSPFGEVLKSIRENEPRAISLGYKVDQYKLMAFILSGTLAGLAGSLKMFVTQNASLT 245

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
              ++ +  V+ + ++GG+ +         I++ + +                       
Sbjct: 246 DVHWTMSGEVVLMTLVGGLGTSFGPIVGAFIIVAMQQYLASF---------------GQW 290

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
              +      + +L     ++  
Sbjct: 291 VMVMQGAVFIVCVLTFRRGIVGE 313


>gi|306834095|ref|ZP_07467215.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus bovis ATCC
           700338]
 gi|304423668|gb|EFM26814.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus bovis ATCC
           700338]
          Length = 294

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 104/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   IY + A G ++V G + L++      Y +GA+      S   ++ W+ +  
Sbjct: 10  LVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFIGYYAISSLHMNFWIALIF 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   GMI+   + +       IA LI +      L        G            
Sbjct: 70  TMIATACLGMIIEFLAYRPLRHSTRIAALITAIGVSFFLEYGMVFLVGANTHS------- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    +    V        +L+    L  ++ L +++T +  A R +  +  
Sbjct: 123 ----FPQAIDIVSYKIGSVTVTNIQLLILIVSLALMVALQLIVKKTKMGKAMRAVSVDSD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG       + I P M   +  I      +LGG+
Sbjct: 179 AAELMGINVNSTISFTFALGSALAGAAGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +  L   +N              +     ++   L +++L+R   
Sbjct: 238 GIIPGAALGGFVIGILETLSISLN-------------LSSYRDAIVYGVLIIILLVRPAG 284

Query: 339 LLR 341
           +L 
Sbjct: 285 ILG 287


>gi|301058601|ref|ZP_07199606.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
 gi|300447333|gb|EFK11093.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
          Length = 337

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 63/320 (19%), Positives = 109/320 (34%), Gaps = 37/320 (11%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  ++  L L       Y   +   + IY + A     +   +GL+SL       +G Y 
Sbjct: 39  LILIVGMLALPLLMPGMYWQRVITIVCIYALLALSFDFLAHFVGLVSLGGAFFIGVGGYF 98

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             I  + +G+     IP++ +       ++ +P L  RG Y AI TL+       + I+ 
Sbjct: 99  SAIFNASFGIPPLFSIPMATVSGAIVCTLLLIPCLPLRGVYFAIVTLMYPLALARV-IEA 157

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             I  G  GI   D                              YV + +  L    +  
Sbjct: 158 TDILGGTDGIMGIDSFSNSWVEQ---------------------YVAIVLVLLFLFGLRR 196

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  T I    R ++DN +A  +   ++ F K  A  ++S    + GA            +
Sbjct: 197 LVNTDIGLVVRAVKDNDQAVRASGMSVNFYKAGAVFIASGIGCLGGACLVHIYMWAGISL 256

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F    +I+ I+  ++GG  +L        IL+ + EL                  F    
Sbjct: 257 FALDFSILPIAATVIGGSGTLVGPVLGCLILVPISELLR---------------DFGTLR 301

Query: 321 TTLMVIALFLVILMRSHSLL 340
                I L   ++ RS  L+
Sbjct: 302 IVFYAILLVCFVVFRSEGLM 321


>gi|16265263|ref|NP_438055.1| putative ureashort-chain amide or branched-chain amino acid uptake
           ABC transporter permease protein [Sinorhizobium meliloti
           1021]
 gi|15141403|emb|CAC49915.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
          Length = 391

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 61/360 (16%), Positives = 107/360 (29%), Gaps = 35/360 (9%)

Query: 13  KILCLLAVVYPLLLFLFLG--ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
            IL  LAV+ P L  L           Y+ S+  + L Y + A  L +V G  G+LSL  
Sbjct: 19  AILLALAVIVPALNLLTAPEHPLHVPTYLVSLFGKYLTYALLALALDLVWGFCGILSLGH 78

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
              +A+G Y+  +   R   +                    LP   +  D    A L++ 
Sbjct: 79  AAFFALGGYAMGMYLMRQIGARGSYGNPLLPDFMVFLNWKELPWFWYGFDMFWFAALMVV 138

Query: 131 EIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFR 171
            +   +   +                             +  D  +     +        
Sbjct: 139 LVPGLLAFVFGWFAFRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILG 198

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F          ++        +S  +   + R+        +RD +     L   +   K
Sbjct: 199 FNIQADGTRAALFAASALALAVSLVVTSGIVRSKFGKVLVALRDAESRTRFLGYRVEHMK 258

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           L AF VS+   G+AGA +      I+P  F  + +I V+    +GG  +L        ++
Sbjct: 259 LFAFTVSAMMAGVAGALYVPQVGIINPGEFAPANSIEVVIWTAVGGRGTLIGPIVGAILV 318

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            G   +              F  +F       +     LV L     ++          R
Sbjct: 319 NGGKSI--------------FTAAFPEFWLFALGGLFVLVTLFLPKGVVGTAQSYLASRR 364


>gi|332161028|ref|YP_004297605.1| branched chain amino acid ABC transporter permease [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325665258|gb|ADZ41902.1| branched chain amino acid ABC transporter permease [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 515

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 81/288 (28%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++ S +       + +  +++      +       
Sbjct: 242 ITYGLLGVINMAHGEMLMLGAYSAYLVQSLFQQLAPHWLALYPLVALPVAFFITAGIGMA 301

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W        G+ +      L     + +         +
Sbjct: 302 LER--TVIRHLYGRPLETLLATWGISLMLIQGVRMIFGAQNLEVANPAWLSGGVQLLPNL 359

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+  +  +     L L +T +    R +  N+              + AF +
Sbjct: 360 VLPWNRIAVIAFVVIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGKVDMLAFGL 419

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+LGG+  L+    A   L  + ++
Sbjct: 420 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 477

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 478 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 512


>gi|319763835|ref|YP_004127772.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|330823901|ref|YP_004387204.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317118396|gb|ADV00885.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|329309273|gb|AEB83688.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 308

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 109/311 (35%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G ++V G +G+++      Y IGAY+ ++  +           +
Sbjct: 12  LFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYAGLVTLAAIGTQSGLPVAV 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            I L++ V+ +++G  G ++   + K   +   +  LI +      L  W  +  G    
Sbjct: 72  IIALMLLVAVLVTGVYGFVVEQVAYKPLRNGPRLVALISAIGMSIFLQNWVALGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   + + +   +RF       V        +++    L  ++ L++R + +  A 
Sbjct: 129 ----RDMAVPSLLPGALRFGDESGFEVFVPYTRVLIIVVTVVLMIALTLYIRHSRMGRAS 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    +      L   +       F + +    + G   A +  +++     F   +   
Sbjct: 185 RACSQDMHMAGLLGIDVNRVISFTFILGAVLAAVGGVLIALAVGKLN-PFIGFIVGVKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L              +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGVAETFAAAYISSEYKDIVAFG-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|302876895|ref|YP_003845528.1| inner-membrane translocator [Clostridium cellulovorans 743B]
 gi|307687581|ref|ZP_07630027.1| inner-membrane translocator [Clostridium cellulovorans 743B]
 gi|302579752|gb|ADL53764.1| inner-membrane translocator [Clostridium cellulovorans 743B]
          Length = 300

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 94/303 (31%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++      + +GAY        + +  ++ + V
Sbjct: 13  LVNGISLGSLYALIAIGYTMVYGILRLINFAHGDIFMMGAYFAFYSIVVFSMPWYVAVIV 72

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  ++   G+++   + K   +    + LI +     +L     +  G            
Sbjct: 73  AIAVTSVLGIVIERAAYKPLRNAPKTSILISAIGVSFLLESVATVAFGGTPKSFP----- 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                +  +         V  +     + +    L   ++  + RT +  A R +  + +
Sbjct: 128 -----QIALFTDNITIGSVTMQKLTVIIPVVTIILLVGLLYLVNRTKVGMAMRAVSRDYE 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               ++          F + S    + G  +      +   +      I      ++GG+
Sbjct: 183 TSALMSINTNRIISLTFVIGSLLASVGGVMWGLKYTTL-LPLMGLMPGIKCFIAAVIGGI 241

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        IL     +            + F             I L +++L++   
Sbjct: 242 GDIKGAVLGGFILGLTEVML-----------VAFAPGLTGYRDAFAFILLIVILLVKPEG 290

Query: 339 LLR 341
           ++ 
Sbjct: 291 IMG 293


>gi|225350884|ref|ZP_03741907.1| hypothetical protein BIFPSEUDO_02458 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158340|gb|EEG71582.1| hypothetical protein BIFPSEUDO_02458 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 309

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 104/304 (34%), Gaps = 13/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A G ++V G + L++        +G+Y+  +L   + ++  L    
Sbjct: 13  IFNGLKIGSVYSLVALGYTMVYGIIRLINFAHGDFIMVGSYAL-MLTIPFIIACGLPAWF 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +    + +G+   +     +      M+ +   I +        +           
Sbjct: 72  AVIPAVLVCVAVGIIVERAAYKPVREKGNNMTALITAIAMSLLLENGSQ------ALFGA 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              TV +++         +  +      +L    +  ++ L++  T    A R + ++++
Sbjct: 126 DYQTVPTIVEIPTLVLGKLKIDGATIITVLLGIAIMVALQLFVSLTKQGKAMRAVSEDKE 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S    +A   +  S  ++S  M      +      +LGG+
Sbjct: 186 ASILMGINVNSTITLTFAIGSGLAAVAALMYCISYPQVS-PMMGAMLGLKAFVAAVLGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++     L           ++    S       ++   L +V+L++   
Sbjct: 245 GSIPGAMVGGLLIGVAESLTKAYIGTITAGVITSAFSDA-----IVFGILIIVLLVKPSG 299

Query: 339 LLRL 342
           L+  
Sbjct: 300 LMGE 303


>gi|283785219|ref|YP_003365084.1| branched-chain amino acid transport system, permease component
           [Citrobacter rodentium ICC168]
 gi|282948673|emb|CBG88265.1| putative branched-chain amino acid transport system, permease
           component [Citrobacter rodentium ICC168]
          Length = 357

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/333 (14%), Positives = 96/333 (28%), Gaps = 27/333 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L L           +  ++  +IL Y + A  L +V G  G+LSL   I +A+G Y+  
Sbjct: 33  FLALLPAEHPLAISVWTLTLTGKILCYAVVAVALDLVWGYAGMLSLGHGIFFALGGYAMG 92

Query: 83  IL-------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
           +               S    +                 ++ L        +   A    
Sbjct: 93  MYLMRQAAGEGLPAFMSFLSWTELPWFWWGTQHFAWAMALVILLPGLLALIFGWFAFRSK 152

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            +     ++       G    +  +  +               P +     + ++   + 
Sbjct: 153 IKGVYFSIMTQALTYAGMLLFFRNETGFGGNNGFTGFTTLLGLPITATSTRVGLFLASVL 212

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  +   L R+        +RD +             +L  + +S+   G+AGA +
Sbjct: 213 LLVLALWLGFALARSKFGRILTAVRDAENRLMFCGYDPKGFRLLVWTLSAMLCGLAGALY 272

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                 I+P     + +I     V LGG  SL        ++ G   L            
Sbjct: 273 VPQVGIINPGEMSPTNSIEAAIWVALGGRGSLIGPVIGAVMVNGAKSL------------ 320

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             F           + +   +V L     ++ L
Sbjct: 321 --FTVIMPEYWQLFLGLIFIVVTLFLPRGVIGL 351


>gi|317405255|gb|EFV85589.1| branched-chain amino acid transport system [Achromobacter
           xylosoxidans C54]
          Length = 375

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/339 (13%), Positives = 94/339 (27%), Gaps = 32/339 (9%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           F          Y  ++  + + Y + A  L +V G  G+LSL   + +A+G Y++ +   
Sbjct: 43  FPAGHPLHVSAYAVALLGKFMCYALAALALDLVWGYAGILSLGHGLFFALGGYAHGMYLM 102

Query: 87  ---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                                W   P     +      M L  L                
Sbjct: 103 RAIGQDGVYQSRLPDFMVFLDWKDYPWYWAFTDHFAYAMLLVVLVPGVLAFVFGYFAFRS 162

Query: 132 IF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                   +I            +  D  +          R   F  +       +Y++ L
Sbjct: 163 RIKGVYFSIITQALTFAAMLLFFRNDTGFGGNNGFTDFKRILGFDITAPGTRAALYWITL 222

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
                +  +   + ++ +      +RD +     +    +  KL  + +S+   G+AGA 
Sbjct: 223 AALAGALVLARAVTQSKLGRVLTAVRDAESRLRFIGYDPLGFKLFVWTLSAVLCGIAGAL 282

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +      I+P       +I ++  V  GG  +L         + G+              
Sbjct: 283 YVPQVGIINPSEMSTENSIEMVIWVATGGRGTLIGPIIGAGAVNGLKTW----------- 331

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
              F           + +   LV L     ++ L     
Sbjct: 332 ---FTSVLPEFWLYALGLIFVLVTLFLPTGIVGLARRLA 367


>gi|254698501|ref|ZP_05160329.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|260762963|ref|ZP_05875295.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59]
 gi|260673384|gb|EEX60205.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59]
          Length = 327

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 54/328 (16%), Positives = 127/328 (38%), Gaps = 33/328 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +   L+  +         +     +++L + +FA   ++++G  G+LS      +
Sbjct: 21  LSAIVLGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 76

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              AY        +G+S  L + +  + + A G+++G  +++ +G Y  + TL ++++F 
Sbjct: 77  GGAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 136

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              ++                       ++ + R F F    +   + MYY +L +  L 
Sbjct: 137 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 182

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              I  +  +      +++R+N+    SL  ++   KL+AF +S+   G+AG   A    
Sbjct: 183 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 242

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             +     +  +  VI + +LGG+ +L       A ++ +       +F           
Sbjct: 243 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 293

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 T +  +     +L+    ++  
Sbjct: 294 ------TIVTGLIFMACVLLFRKGIIGE 315


>gi|220921245|ref|YP_002496546.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219945851|gb|ACL56243.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 628

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 118/322 (36%), Gaps = 34/322 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                  Y+  +  +IL++ + A+ L  ++G  GL+S      + +GAY+  +L +    
Sbjct: 331 VPLLGDAYLVKVATEILVFALAAFSLQFLIGVGGLVSFGHAAYFGLGAYAAGLLVTGPLR 390

Query: 91  SIW-LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
                 +  + +   A   + G   ++  G YLA+ TL  ++I   I  +W  +T G  G
Sbjct: 391 LPMEPALLAAPLAGAAGAALFGFFIVRLSGIYLAMLTLAFAQIVYAIGFQWVEVTGGDNG 450

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           I                     +PS++       +Y++  +   + +++  +        
Sbjct: 451 IVGV------------------WPSAWAADRTVYFYLVAALTLSAIALLRHVIMAPFGYT 492

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R  RD+     ++   +   +   F ++ A  G+AG  +A  +  I P +     +I  
Sbjct: 493 LRAARDSATRAEAIGLDVRTHRWLGFTLAGAAAGLAGGLYAFQKGSIDPTLAAIPLSIDF 552

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           + +V++GG+ ++            + +    +  Y+                 L+ +A+ 
Sbjct: 553 LVMVLVGGIRTVMGPLVGAGFFHALKDAVMPLTAYW---------------RLLLGLAII 597

Query: 330 LVILMRSHSLLRLRTPSNFLER 351
             +L+    L           R
Sbjct: 598 ATVLIFPRGLAGAAEALRSRRR 619



 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 91/309 (29%), Gaps = 32/309 (10%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV------ILGSRYGLSIW 93
            S         + A GL+IV G   +++      Y +GAY  V      +  S    + +
Sbjct: 11  LSGLASAASLFVIASGLTIVFGVTRIVNFAHGSFYMLGAYLAVSLVPRLLDLSYSPWAFF 70

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L + +SA++ G  G+ + +  L+       +  L+ +     I+        G   +   
Sbjct: 71  LGVGLSALLVGLIGVAVEMLLLRRLYRVPELFQLLATFGVVLIVEDLVLAIWGPVDLAGP 130

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                                    +  +   ++     +   + L +RRT      R  
Sbjct: 131 RAPSLR----------HGVEILGQRFPAYDLVLIGIGPAVLVLLWLLMRRTRFGILIRAA 180

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             +++   +L             + +   G+ GA                S       + 
Sbjct: 181 TQDREMVGALGVNQARLFTLTLFLGACLAGLGGALQIPRVPA--NPHMDLSVITDAFVVT 238

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ++GGM S+     A  ++  +                            L+   + +V++
Sbjct: 239 VIGGMGSVPGAFLAALLIGELQAFGI--------------LVLPKATLVLVFALMAVVLV 284

Query: 334 MRSHSLLRL 342
           ++   LL  
Sbjct: 285 VKPWGLLGR 293


>gi|332704341|ref|ZP_08424429.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332554490|gb|EGJ51534.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 300

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 100/308 (32%), Gaps = 17/308 (5%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
              +Y      +  IY + A G ++V G + L++      Y IGA++ +I+    G+  +
Sbjct: 3   FFWEYFFGGLTRGSIYALIALGYTMVYGIIELINFAHGEIYMIGAFTGLIVAGVLGVLGF 62

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + + A+   A  +  G                       + LI    ++       + 
Sbjct: 63  PGLAILAIALVAAVIWAGAYGYTVEKIAYRPLRNA---PRLSPLISAIGMSIFLQNYVLL 119

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            +        R +  F       ++     + ++     +   + L+++ T +  A R  
Sbjct: 120 AQTSDFLPFPRLIPNFGFMEPYSMVMGSSDFVIVAVSALVMVGLTLFIKYTRLGKAMRAT 179

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             N+K    +   +     + F + S    + G   A+   +I+     F   I   S  
Sbjct: 180 AQNRKMAQLVGVNVDRVISATFIIGSTLAAIGGVLIASHIGQINFF-IGFIAGIKAFSAA 238

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ S+        IL        G     +  +  F               L ++++
Sbjct: 239 VLGGIGSIPGAVLGGLILGWTESFATGYISSDYEDVFAF-------------ALLVIILI 285

Query: 334 MRSHSLLR 341
            R   LL 
Sbjct: 286 FRPSGLLG 293


>gi|237731474|ref|ZP_04561955.1| inner-membrane translocator [Citrobacter sp. 30_2]
 gi|226907013|gb|EEH92931.1| inner-membrane translocator [Citrobacter sp. 30_2]
          Length = 524

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY   ++    G      +    +I+     ++       
Sbjct: 251 ITYGLLGVINMAHGEMLMLGAYCTWMVQQLMGQFFPHGLAWYPVIALPVAFLLTAAVGML 310

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      L     + +       + +
Sbjct: 311 LER--GVIRHLYGRPLETLLATWGISLMLIQLVRMTFGAQNLEVANPAWLSGGIQVYANL 368

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       VL     +     L L +T +    R +  N+              + AF +
Sbjct: 369 ILPWNRIVVLGFAMLVLFFTWLLLNKTRLGLRVRAVTQNRNMAACCGVPTGRVDMLAFGL 428

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 429 GSGIAGLGGV--ALSQLGNVGPELGQSYIIDSFLVVVLGGVGQLAGSVAAAFGLGIFNKI 486

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      ++                        R   L  L+  
Sbjct: 487 LEPQVGAVLGKIIILVLIILFIQK-------------RPQGLFALKGR 521


>gi|118471578|ref|YP_887299.1| hypothetical protein MSMEG_2980 [Mycobacterium smegmatis str. MC2
           155]
 gi|118172865|gb|ABK73761.1| putative membrane protein [Mycobacterium smegmatis str. MC2 155]
          Length = 375

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/340 (13%), Positives = 103/340 (30%), Gaps = 29/340 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
                  +L   +       +  S+  + L + + A G+ +  G  G+L L   + + +G
Sbjct: 12  AGFAVAAVLLFGVAPAVLSDFRLSLLGKFLCFAIVAVGIGLAWGRGGMLVLGQGVFFGLG 71

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y   +        I        M       + G  +      +  +A L++      +L
Sbjct: 72  GYMMGMHLKIADAEIRHQAVPDFMQIAGVRELPGYWTPFASPVFTLLAILVIPAGIAALL 131

Query: 138 ---------------IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
                          I  + +    A + V          + +   FF F  +  + +  
Sbjct: 132 GLGVFKRRVKGAYFAILSQALAAALAILLVGQTSLGGSNGLNNFRTFFGFTLNDPVNKRM 191

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +Y++      +  +++  L  +        +RD ++    L       K+ A+ +++ F 
Sbjct: 192 LYFIAAATLLIVVAVVRQLMYSRYGELLVAVRDGEERVRFLGYDPANIKVVAYTLAALFA 251

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
            +AGA F      I+P       +I  +  V +GG T+L         +     L     
Sbjct: 252 SIAGALFTPIVGFIAPSQVGIIPSIAFLIGVAIGGRTTLLGPVLGAIGVAWAQTLFSERF 311

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              +                   +   +V+      +  L
Sbjct: 312 PSEWTYAQ--------------GLLFIVVVGFFPAGIAGL 337


>gi|237737373|ref|ZP_04567854.1| branched-chain amino acid transporter permease livH [Fusobacterium
           mortiferum ATCC 9817]
 gi|229421235|gb|EEO36282.1| branched-chain amino acid transporter permease livH [Fusobacterium
           mortiferum ATCC 9817]
          Length = 294

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 91/306 (29%), Gaps = 28/306 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL---SIWLL 95
           I +      IY + + G ++V G   L++        +GAY  +     +      +WL 
Sbjct: 7   IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMVGAYVSLFSIPVFTRIGLPVWLT 66

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  + ++    GM+    + +   +   I+ LI +      L                  
Sbjct: 67  VVPAIVLCVVLGMLTERVAYRPLRNSPRISNLITAIGVSLFLENLFMKIFTPN------- 119

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                     +          +         ++    LS  +  ++++T    A     +
Sbjct: 120 ----TRAFPKVFTQEPLRFGDIYLNYGTVVTIVLTLILSVGLQYFMKKTKYGKAMLATSE 175

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   +   +       FA+ S    +A   + ++  ++ P M      I      +L
Sbjct: 176 DYGAAKLVGINVNSTIQLTFAIGSGLAAIASVLYVSAYPQVQPLM-GSMLGIKAFIAAVL 234

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  L        IL  V  L                          +   L +V+L++
Sbjct: 235 GGIGILPGAVIGGFILGIVESLTRAYLSSQLADA-------------FVFAILIIVLLVK 281

Query: 336 SHSLLR 341
              LL 
Sbjct: 282 PTGLLG 287


>gi|13474089|ref|NP_105657.1| branched-chain amino acid ABC transporter, permease protein
           [Mesorhizobium loti MAFF303099]
 gi|14024841|dbj|BAB51443.1| branched-chain amino acid ABC transporter, permease protein
           [Mesorhizobium loti MAFF303099]
          Length = 320

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 62/323 (19%), Positives = 122/323 (37%), Gaps = 24/323 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+   ++  LF+ +    +Y   +  +I++  +FA G +++ G +GLLSL   + +  G 
Sbjct: 11  ALHLGVIALLFVLSFVLPEYYHGLLARIMVLAVFAMGYNMLFGYVGLLSLGHAMFFGAGL 70

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y   +   + G  + L             +++GL +L+  G    I T++ +++F  +++
Sbjct: 71  YGAGLAIIQLGWGVPLAFLGGIASGAVLALVIGLLALRATGVAFMIVTMMFAQVFYLLIL 130

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            +   T G  G  V      L              S  +      Y   L +  L   + 
Sbjct: 131 YFAAWTGGDQGQVVPQPARALNL---------GATSLDLTNPTVRYMSALVLFSLVLLLT 181

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           L + R+        IR+N++    L       KL A  VS      +GA +A     +  
Sbjct: 182 LAVVRSRYGRVLVAIRENEERTKMLGYDTFSNKLIAVVVSGTICAASGAAYALLFGYVGS 241

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                  +I+ +  V+LGG  +       T  +  V+++  G                  
Sbjct: 242 SFASVQYSILPLLWVLLGGAATTLGPLIGTVFMYYVIDVSSGY---------------TS 286

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
            +  ++ IAL L++L     +L 
Sbjct: 287 AYLLIVGIALILLVLFFPKGILG 309


>gi|311104709|ref|YP_003977562.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310759398|gb|ADP14847.1| inner-membrane translocator 22 [Achromobacter xylosoxidans A8]
          Length = 327

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 62/336 (18%), Positives = 132/336 (39%), Gaps = 23/336 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +N+      +LAVV  +L F+ +             ++I+ Y +FA   ++++G  GLLS
Sbjct: 1   MNRQFLGYAVLAVVVAMLPFVGVYPIF--------AMKIMCYALFACAFNLLLGFTGLLS 52

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                     AY+       +G    + +     ++   G+ MG  +++  G Y A+ TL
Sbjct: 53  FGHAAFLGSAAYATGHALKVWGFPTEIGLLFGVAVAALLGLAMGALAIRRSGIYFAMITL 112

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +S++     ++    T G+ G+    R    G    S               + +YYV+
Sbjct: 113 ALSQMVFFFFLQA-KFTGGEDGLQSVPRGTLFGLIDLSKD-------------LNLYYVV 158

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +  +   II     +      + +R+N+    SL   +   KL AF +S+A  G+AGA
Sbjct: 159 MAIFIIGYFIIWRTVNSPFGQVLQALRENEPRAISLGYDVDRFKLLAFVLSAALAGLAGA 218

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
                    +     +  + +VI + ++GG+ +L+       I++ +            N
Sbjct: 219 TKTLVFVSATLSDATWQMSGLVILMTLIGGLGTLTGPILGAFIVVLMENKVGDFGQMMAN 278

Query: 308 -SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            + + +        T ++ +   + +L     ++  
Sbjct: 279 LTGVDWFLRLGESVTIVIGLIFVICVLAFRRGIVGE 314


>gi|237811955|ref|YP_002896406.1| ABC transporter, permease/ATP-binding protein [Burkholderia
           pseudomallei MSHR346]
 gi|237504106|gb|ACQ96424.1| ABC transporter, permease/ATP-binding protein [Burkholderia
           pseudomallei MSHR346]
          Length = 761

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 4   ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 64  GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGSALAGWEFGKPMHAYALIAAWCVIAAV 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298


>gi|319944630|ref|ZP_08018897.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Lautropia mirabilis ATCC
           51599]
 gi|319742069|gb|EFV94489.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Lautropia mirabilis ATCC
           51599]
          Length = 317

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 88/287 (30%), Gaps = 1/287 (0%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +      IY + A G ++V G +G+++      Y IGAY  ++  +  G    + +P++ 
Sbjct: 24  NGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTALGTQGSVPLPLAI 83

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
            +  A  MI+                     +   I      I                 
Sbjct: 84  GLMLAMAMIVTALYGYSVERIAYRPVRGGPRLVALISAIGMSIFLQNWVALGQGSRDMAV 143

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
            ++ S      F +  V +      +++    L   + L++R + +  A R    + +  
Sbjct: 144 PSLISGGIDIPFGNFDVTFSWSRILIIVVTVVLMVGLSLYIRHSRMGRASRACSQDMQMA 203

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             L           F + +    + G   A +  +++     F   I   +  +LGG+ S
Sbjct: 204 RLLGIDTNRVISFTFVLGAVLAAVGGVLIAITIGKLN-PFIGFIAGIKAFTAAVLGGIGS 262

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +        +L              +  ++ F     +       + 
Sbjct: 263 IPGAMLGGVLLGLAETFAAAFISAQYKDIVAFGLLILILLFRPSGLL 309


>gi|217976263|ref|YP_002360410.1| inner-membrane translocator [Methylocella silvestris BL2]
 gi|217501639|gb|ACK49048.1| inner-membrane translocator [Methylocella silvestris BL2]
          Length = 282

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 61/305 (20%), Positives = 120/305 (39%), Gaps = 42/305 (13%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             S+   + +  + A  + +V+   G LSL       +GAY+  +L    GL   L++  
Sbjct: 12  YQSLIASLGVNGLLALSMYVVLAI-GQLSLGQAAFMGLGAYASALLSLHSGLPFPLVLAA 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I  A  +++G P+L+  G YLA+AT+ + EI +  LI+   +T G  G+        
Sbjct: 71  ATLIPAAFALVIGAPTLRLSGVYLALATIGLGEILRIFLIQ-SDLTGGALGLSGIPAKAG 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                      ++ G        ++ + R+ +  A   IR+++ 
Sbjct: 130 F-------------------------ALIYGCLAAVTLALMLIARSRVGRAMEAIREDET 164

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A       +   K++A  VS+   G+AGA  A +   I P+ + F   + ++S  +LGG+
Sbjct: 165 AAAVSGVDLPRYKMAALVVSAMLAGLAGALNAHASSFIGPNDYGFDAAVTILSYALLGGV 224

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         +L  + E+   +  +                  +    + + +L   H 
Sbjct: 225 GSPFGPLAGALVLTLLPEILRPLQDF---------------RLVVNGAIIVIAVLYMPHG 269

Query: 339 LLRLR 343
           L+  R
Sbjct: 270 LIPWR 274


>gi|15890848|ref|NP_356520.1| ABC transporter, membrane spanning protein (branched chain amino
           acid) [Agrobacterium tumefaciens str. C58]
 gi|15159141|gb|AAK89305.1| ABC transporter, membrane spanning protein (branched chain amino
           acid) [Agrobacterium tumefaciens str. C58]
          Length = 335

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 126/334 (37%), Gaps = 33/334 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + ++  L + +         ++  +      + +FA   ++++G  GLLS      +   
Sbjct: 28  VLILAGLAVLIAAPMFVYPIFLMKLL----CFALFACAFNLLIGYTGLLSFGHAAFFGGA 83

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY        +G++  + + +    +   G+++G  +++ +G Y A+ TL +S++F    
Sbjct: 84  AYFTAYSVKEWGVTPEIGLIIGMAGAALLGLVIGFFAIRRQGIYFAMITLALSQMFYFFC 143

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++                       ++ + R   F    +   + +YY +L    L+  +
Sbjct: 144 LQA--------------PFTHGEDGLQGVPRGHLFGLLDLNAPLNIYYTVLAAFVLALLV 189

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           I     +      ++IR+N++   SL  ++   KL AF +S+A  G+AG   A      +
Sbjct: 190 IWRFVNSPFGMILKSIRENEQRAISLGYSVQRYKLGAFVMSAALAGLAGGLKALVFQFAT 249

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
                +  +  VI + +LGG+ ++        +++ +       +F              
Sbjct: 250 LTDVTWQMSGEVILMTLLGGIGTMIGPIFGAGLVVTLQNYLATSDFPV------------ 297

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
              T +  +     +L+    L+     S    +
Sbjct: 298 ---TIITGLVFMACVLVFRRGLIGEFYASRLGRK 328


>gi|324997165|ref|ZP_08118277.1| ABC transporter permease protein [Pseudonocardia sp. P1]
          Length = 431

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 52/318 (16%), Positives = 97/318 (30%), Gaps = 27/318 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
           G     + +       L+  + A GLS++ G+ GL +        IGA     +    G+
Sbjct: 136 GFATFLRLLVDGIRFGLVIGISAIGLSLIFGTTGLTNFAHGEMVTIGAVVAWYINVVGGV 195

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGD--YLAIATLIMSEIFQNILIKWKPITNGKA 148
            +     ++ ++  A G    L   +         IA L++S      L     I  G  
Sbjct: 196 QLIPATIIAVLVGAALGAANELGIWRRLRRRGAGLIAQLVVSIGLSIALRYLILIFFGGR 255

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                                       +         ++    +   + L L+RT I  
Sbjct: 256 SES-----------FTDYTAQQVRNYGPIALTDKDLSAIVIAVVVLLGVALLLQRTRIGK 304

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS-RDRISPDMFKFSENI 267
           A R + DN+    S    +    L  + +      + G  FA S           F   +
Sbjct: 305 AMRAVSDNRDLAASSGINVDRVILFVWMLGGGLATLGGVLFALSELSSTVQYEMGFRLLL 364

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           ++ + VILGG+ +         I+  +V+L   +       L                  
Sbjct: 365 LMFAGVILGGLGTAYGALLGCLIVGILVQLSTLVLPLDLKYLGGL-------------AV 411

Query: 328 LFLVILMRSHSLLRLRTP 345
           L ++++ R   LL  +  
Sbjct: 412 LIVILVFRPQGLLGSKAR 429


>gi|319407280|emb|CBI80921.1| permease protein of ABC transporter [Bartonella sp. 1-1C]
          Length = 360

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 65/339 (19%), Positives = 116/339 (34%), Gaps = 7/339 (2%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K   I      +   + FLF        Y   +   I I  + A  L++  G  G+ S
Sbjct: 1   MTKSLNIFLSFVSIIIFISFLFYADNYFNDYTLRIINLIAINAILAISLNLTYGFTGMFS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      AIGAY   I           ++ +   I+     +     +      L+ A +
Sbjct: 61  LGHAGFMAIGAYVCAIFLLSPEQK--EMMWILEPIAEPLKNLQLSFFVSVIISGLSAAII 118

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +   F  + +    +     G     R+  +  T  +            I +    +  
Sbjct: 119 GLLIAFPILRLGGDYLGIATLGFAEIIRVVIINATPLTN----GSLGIKGIPQYATLWWN 174

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
            G    +   I  L ++   N  R IRD++ A   +     F +  +F V + F G+ GA
Sbjct: 175 FGWLAFTIIFITLLLQSNTGNVLRAIRDDEIAAKIMGVNTFFYRCFSFTVGAFFAGIGGA 234

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             AA    I P MF F     ++ IV+ GG+ S++    ++ I+  ++E    +      
Sbjct: 235 LTAALISTIDPKMFNFILTFNILMIVVAGGLGSITGSVISSIIITIMLEWLRIIENPLNL 294

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
             +            +  + L  +IL     LL  R  S
Sbjct: 295 GFINIP-GLPGLRMVIFSLILLAIILYWQKGLLGQREFS 332


>gi|289675633|ref|ZP_06496523.1| inner-membrane translocator [Pseudomonas syringae pv. syringae FF5]
          Length = 313

 Score = 81.1 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 52/320 (16%), Positives = 96/320 (30%), Gaps = 27/320 (8%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------- 86
             Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +            
Sbjct: 1   SAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAGDGLP 60

Query: 87  -RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
                  W  +P     +      M L  L      L           + +         
Sbjct: 61  AFMTFLSWTELPWYWAGTDNFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIMTQAL 120

Query: 146 GKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
             AG+ +  R    +       +      F  S       ++   + +   S  I   L 
Sbjct: 121 TFAGMLLFFRNETGFGGNNGFTNFRSILGFSISAQGTRAALFMATVALLVASLYIGWRLA 180

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           ++        +RD +             KL  + +S+   G+AGA +      I+P    
Sbjct: 181 QSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINPSEMS 240

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + +I     V LGG  +L        ++ G+                 F  +F      
Sbjct: 241 PTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSW--------------FTMAFPEYWLF 286

Query: 323 LMVIALFLVILMRSHSLLRL 342
            +     +V L     ++ +
Sbjct: 287 FLGALFIIVTLYLPKGVIGM 306


>gi|311696547|gb|ADP99420.1| inner-membrane translocator [marine bacterium HP15]
          Length = 402

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/329 (14%), Positives = 88/329 (26%), Gaps = 36/329 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL----------- 84
             +  +M  + L Y   A GL +  G  G+LSL   + + +G Y   +            
Sbjct: 34  DPFRLNMVGKYLTYAFVAIGLVMCWGKAGILSLGQGVFFGLGGYCMAMFLKLEASTPEAT 93

Query: 85  -GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
                      +                  S            L     F     +   +
Sbjct: 94  AIQSTPGIPDFMDWNQLTELPWFWEPFHSFSFTLLAVIGVPVLLAFVIGFAMFTRRVGGV 153

Query: 144 TNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLLGMCFL 193
                   +A  L  L    +                 +          +Y+V +GM FL
Sbjct: 154 YFAIITQAIAAILTILIIGQQGYTGGVNGITDLQTLNGWDIRTDEARTILYFVCVGMLFL 213

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              +   ++   +      +   +         +   K+  F +++AF G+ GA F    
Sbjct: 214 CLFVARLVQNRKLGRILVAMNAQENRVRFSGYDVAAFKIFVFCLAAAFAGVGGAMFTLIV 273

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             +SP       +I ++    LGG  S+        ++                +   F 
Sbjct: 274 GFMSPSFIGIVASIEMVIFCALGGRLSILGAVYGALLV--------------NAAKSGFS 319

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            SF       M      V+L   + L  L
Sbjct: 320 ESFPELWPFAMGALFIGVVLAFPNGLAGL 348


>gi|84502431|ref|ZP_01000567.1| putative permease abc transporter protein [Oceanicola batsensis
           HTCC2597]
 gi|84389243|gb|EAQ02040.1| putative permease abc transporter protein [Oceanicola batsensis
           HTCC2597]
          Length = 285

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 103/309 (33%), Gaps = 28/309 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y M + GL+I+ G + +++      Y +GA+   +L    G+  W  + +
Sbjct: 5   LLIGLINGSFYAMLSMGLAIIFGLMNVVNFAHGAQYMLGAFVTWLLLDALGIPYWGALFI 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++  A G+I     LK   D   + +L+ +     I+        G  G+  +  +  
Sbjct: 65  APVVVAAFGLITERIVLKPLQDMDHLYSLLATYAVALIVEGLVRQQYGSTGLPYSTPIP- 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                            F+    +  +V+L    +  +  + +  T +    R   +   
Sbjct: 124 -----------GGINLGFMYLPWYRLWVVLFSLMVCVATWVLMEYTKLGAYLRAATEKPD 172

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              S    +       +A      G++G   A             +  I + ++V++GGM
Sbjct: 173 IVESFGINVPRMITLTYAFGVGLAGLSGVLAAPVYQV--SPSMGSTLMITIFAVVVIGGM 230

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L  V  L                  +      ++ + + L ++ R + 
Sbjct: 231 GSIMGAVLTGYLLGIVEGLTKVF--------------YPEAANMVIFVIMILALIFRPNG 276

Query: 339 LLRLRTPSN 347
           L   +  S 
Sbjct: 277 LFSGKERSL 285


>gi|317154163|ref|YP_004122211.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2]
 gi|316944414|gb|ADU63465.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2]
          Length = 300

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 91/299 (30%), Gaps = 17/299 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
             +  IY + A G ++V G + L++      Y IGA++ +I+        +    + A+ 
Sbjct: 12  LTRGSIYALIALGYTMVYGIIELINFAHGEIYMIGAFTGLIVAGVLTALGFPAASILAIA 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                +                            LI    ++       +  +       
Sbjct: 72  LVCAVLWAAAYGYTVEKVAYKPLRGAQRLSP---LISAIGMSIFLQNYVMLSQTSDFLPF 128

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                +F        I       +++    +   + L+++ T +  A R    N+K    
Sbjct: 129 PALTPQFDFMKPFGSIMNSSELVIVVATVTVCIGLTLFIKFTKLGKAMRATAQNRKMAML 188

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +     + F + S+   + G   A+   +I+     F   I   +  +LGG+ S+ 
Sbjct: 189 VGVNVDMVISATFIIGSSLAAVGGVLIASHVGQINYF-IGFIAGIKAFTAAVLGGIGSIP 247

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  +L        G     +  +  F               L L+++ R   ++ 
Sbjct: 248 GAMLGALVLGLTEAFATGYVSSDYEDVFAFC-------------LLVLILIFRPAGIMG 293


>gi|212702448|ref|ZP_03310576.1| hypothetical protein DESPIG_00465 [Desulfovibrio piger ATCC 29098]
 gi|212674109|gb|EEB34592.1| hypothetical protein DESPIG_00465 [Desulfovibrio piger ATCC 29098]
          Length = 297

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 94/303 (31%), Gaps = 22/303 (7%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +      +Y + A G ++V G L L++        +GAY        YG    +   ++ 
Sbjct: 12  NALTLGSLYALIAIGYTMVYGILRLINFAHGDILMVGAYFVFFGTFAYGWPWGVAAIIAI 71

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           + +   G+++   + +   D   I+ LI +      +     +                 
Sbjct: 72  LGASVLGVVVERVAYRPLRDAPRISALISAIAVSFFIESLAVVVF----------TGQPR 121

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             ++       +    V       +V +    L A ++  +  T    A R I  + +  
Sbjct: 122 PVLQPDWLLSVWQFGDVRILKLTAFVPVMTIVLVALLLYIVHHTKPGLAMRAISKDIETT 181

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             L   +       F + SA    +G  +A    ++ P M      +      + GG+ S
Sbjct: 182 RLLGVRVDNIIAFTFFIGSALAAASGIMWALRYPQVHPYM-GIMPGLKAFIAAVFGGIGS 240

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +         L  V  +            + F    +        I L LV++ +   LL
Sbjct: 241 IPGAVIGGVALGFVEIMT-----------VAFMPELSGFRDAFAFILLVLVLVFKPTGLL 289

Query: 341 RLR 343
             R
Sbjct: 290 GER 292


>gi|158426139|ref|YP_001527431.1| putative ABC transporter, permease protein precursor [Azorhizobium
           caulinodans ORS 571]
 gi|158333028|dbj|BAF90513.1| putative ABC transporter, permease protein precursor [Azorhizobium
           caulinodans ORS 571]
          Length = 331

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 62/322 (19%), Positives = 125/322 (38%), Gaps = 29/322 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V   L+ + +             +++L + +FA   ++++G +GLLS    + +    Y 
Sbjct: 22  VVFALVAIAVLLVAPLVVYPVFLMKVLCFALFACAFNLLLGYVGLLSFGHAMFFGGAGYI 81

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                  +GLS  L I    + +   G+I G  +++  G Y A+ TL ++++F    ++ 
Sbjct: 82  CAHAVKVWGLSTELGILCGVLFAALLGLITGALAIRRLGIYFAMVTLALAQMFFFFCLQA 141

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
              T G+ G+    R                F    +  +I +YYV+L +  +   II  
Sbjct: 142 -KFTGGEDGLQGVPRRAV-------------FGLIDITKDINLYYVVLAIFLIGFGIIYR 187

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
              +      + IR+N+    SL   +   KL AF +S+A  G+AG+  A      S   
Sbjct: 188 TIHSPFGQVLKAIRENEPRAISLGYRVSQYKLLAFVLSAALAGLAGSTKAIVFQLASLTD 247

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
             +  +  V+ + ++GGM ++        I++ +     G   +                
Sbjct: 248 VAWQMSGEVVLMTLVGGMGTVLGPVVGAGIIVTMQNYLAGFGEWV--------------- 292

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
             +  +   LV+ +    L+  
Sbjct: 293 LVIQGLIFVLVVSVFRRGLVGE 314


>gi|317407711|gb|EFV87642.1| ABC transporter [Achromobacter xylosoxidans C54]
          Length = 309

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 91/305 (29%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +GL++        IGA +   +              
Sbjct: 8   LINGVTLGSVYALVALGYTMVYGIIGLINFAHGDVVMIGAMAATTIAISLVGGDPSA--S 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + M+ G   ++     +        +A   +    +   +      +             
Sbjct: 66  AFMVLGLGLLVSVPLCMAVGWTAERVAYRPLRRAPRLAALITAIGVSIILQNVAMMGWGR 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  ++    F             ++     +   ++  + +T +  A R    N++
Sbjct: 126 NYLNFPQVLTPQVFEIFGARMSTLQIAIVAIAALIMGGLLAVVHKTRLGTAMRATAQNRE 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   I     +AF + SA   +AG   A     +S     F   +   +  +LGG+
Sbjct: 186 VAGLMGVNINTVISAAFLIGSALAAVAGMMVATYYG-VSQYTMGFMLGLKAFTAAVLGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L  +  L  G         L      +          L LV++ R   
Sbjct: 245 GNLVGAMAGGLLLGIIESLGAGYIGDLTGGFLG-----SHYQDVFAFFVLVLVLIFRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|307544863|ref|YP_003897342.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307216887|emb|CBV42157.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 374

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/329 (13%), Positives = 91/329 (27%), Gaps = 33/329 (10%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 Y  ++  + L Y + A  + +V G LG+LSL     +A+G Y+  +   R    
Sbjct: 38  PLHVSTYTVTLLGKYLSYALLAVAVDLVWGYLGILSLGHGAFFALGGYAMGMYLMRQIGD 97

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA--- 148
                               LP      D    A L++      + + +  +        
Sbjct: 98  RGTYGDPVLPDFMVFLDWDSLPWYWLGFDMPWFAFLMVFLAPGLLALVFGFLAFRSRVTG 157

Query: 149 ----------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
                             +  +  +     +        F        + ++        
Sbjct: 158 VYLSIITQAMTFALMLAFFRNEMGFGGNNGLTDFRELLGFDLRSDATRLGLFLATGVALA 217

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L   +   +  + +       RD +     L   +   +L  F VS+   G+AGA +   
Sbjct: 218 LGYVLCRAIVASKLGRVSVACRDAEARARFLGYRVERFQLFVFVVSAMLAGLAGALYVPQ 277

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              I+P  F    +I V+  V LGG  +L        ++     +  G+           
Sbjct: 278 VGIINPSEFSPIFSIEVVLWVALGGRATLYGAVIGALLVNYAKTVFTGV----------- 326

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                      +     LV +     +  
Sbjct: 327 ---MPDAWLFALGGMFVLVTVFLPRGIAG 352


>gi|145224382|ref|YP_001135060.1| inner-membrane translocator [Mycobacterium gilvum PYR-GCK]
 gi|145216868|gb|ABP46272.1| urea ABC transporter membrane protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 370

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 51/336 (15%), Positives = 100/336 (29%), Gaps = 29/336 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
              L+   L       +  S+  + L + + A G+ +  G  G+L L   + + +G Y  
Sbjct: 16  VAALVLFVLAPAILSDFRLSLLGKFLCFAIVAVGIGLAWGRGGMLVLGQGVFFGLGGYMM 75

Query: 82  VILGSRYGLSI---------------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            +        +                L    +   S A  +I  +         L +  
Sbjct: 76  AMHLKIADAQLRGDDVPDFMQIQGIRELPSYWTPFASPAVTLIAIVVIPTGIAVVLGLGV 135

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
                      I  + +    A + V          +     FF F  +       +Y++
Sbjct: 136 FKRKVKGAYFAILSQALAAALAILLVGQTSLGGSNGLNRFRTFFGFTLNDPANRRMLYFI 195

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
              +  L  +++  L ++        +RD ++    L       K+ A+AV++ F  +AG
Sbjct: 196 AAAVLLLVVAVVRQLMQSRYGELLVAVRDGEERVRFLGYDPANIKVVAYAVAALFASIAG 255

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A FA     I+P       +I  +  V +GG  +L         +     L        +
Sbjct: 256 ALFAPIVGFIAPSQVGILPSIAFLIGVAIGGRATLLGPVLGAIGVAWAQTLFSERFPSAW 315

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                              +   LV+      L  L
Sbjct: 316 TYGQ--------------GLLFILVVGFLPAGLAGL 337


>gi|300024321|ref|YP_003756932.1| urea ABC transporter permease [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526142|gb|ADJ24611.1| urea ABC transporter, permease protein UrtC [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 363

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 55/354 (15%), Positives = 114/354 (32%), Gaps = 44/354 (12%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             LA  +     +F        +  +     L+Y + A G+S+  G  G+LSL   + + 
Sbjct: 6   ITLAAYFLFFAVVFALPFALNSFWTNRIAVYLVYAICAVGISLSWGYAGILSLGQGLFFG 65

Query: 76  IGAYSYVI----------------------------LGSRYGLSIWLLIPVSAMISGACG 107
           IGAY   +                              +  G  +W      ++   A  
Sbjct: 66  IGAYMISMSLTLALPDNNPVPQFMLLNMEPNAPRDLCCATPGSFLWQPFQYLSIGVLAGI 125

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           ++  + +           T  +      + +       G+  I     L      +  L 
Sbjct: 126 LVPCVIAAVLGYVMFKRRTSGVYVSIITLALALI----GQMLIINNQPLTGGFNGLADLA 181

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                   F  Y   +YY++     +   +   +  T + +  + +R++      L   +
Sbjct: 182 PLSVGGIEFDPYGKSVYYLVAAALLVVVLLSRLIVSTRMGHVLKAVREDDARVRYLGYNV 241

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
              KL  + +S+A  G+AG  FA + +  SP +   S +I ++    LGG +SL      
Sbjct: 242 ENYKLFIYCLSAAIAGIAGLLFAVTSEFASPSLMSTSFSISMVIWAALGGRSSLLGACIG 301

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             I+  +             S+   +         ++ +   LV+L+    +  
Sbjct: 302 ALIVNFI------------GSVASENVMLQPVWPIVLGLMFVLVVLVMPEGIAG 343


>gi|254474835|ref|ZP_05088221.1| urea ABC transporter, permease protein UrtC [Ruegeria sp. R11]
 gi|214029078|gb|EEB69913.1| urea ABC transporter, permease protein UrtC [Ruegeria sp. R11]
          Length = 409

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 112/366 (30%), Gaps = 36/366 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +  IL L  +   +L         S  ++ ++G + L   + A  + +V G  G+LSL  
Sbjct: 15  FLAILSLFTLGVTILSEGVGIGVISTSFVKTLG-KTLCLCLIAVAMDLVWGFTGILSLGH 73

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVS-----------------AMISGACGMIMGLP 113
              + +G Y   +        + ++  ++                  +          L 
Sbjct: 74  FAFFGLGGYMIGMWLMYERTRLIVVDSLAQAEIPPTSTEVVDAIATQVFGVVGSSEFPLI 133

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY-----------------VADRL 156
                   L +  +++      ++  W    +   G+Y                   D  
Sbjct: 134 WAFSHSLTLQLILVVLVPGLLALIFGWLAFRSRVTGVYLSILTQAMTLALALYLFQNDSG 193

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +  L       +S  +  I+  +       L   +  W+      +  R IRDN
Sbjct: 194 LRGNNGLSGLQNLPGVTASQDVVSIWFLWASALALGLGYMLAAWVVSGKFGSVIRGIRDN 253

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +     L  ++   KL+ F +++    +AGA +      I+P+      +I +   V +G
Sbjct: 254 EARVRFLGYSVEVYKLAVFTLTACIAAVAGALYYPQAGIINPEEMAPIASIYLAVWVAIG 313

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G   L       A +  +     G           +   +      L+ ++  LV L   
Sbjct: 314 GRGRLYGAVIGAAFVSLLSTWFTGGQAPDIPLGF-YTIKWVDWWQVLLGVSFVLVTLFAP 372

Query: 337 HSLLRL 342
             +  L
Sbjct: 373 QGIGGL 378


>gi|229490180|ref|ZP_04384027.1| urea ABC transporter, permease protein UrtC [Rhodococcus
           erythropolis SK121]
 gi|229322928|gb|EEN88702.1| urea ABC transporter, permease protein UrtC [Rhodococcus
           erythropolis SK121]
          Length = 368

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 55/350 (15%), Positives = 106/350 (30%), Gaps = 20/350 (5%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           MSI +    +      L A+V   +    L       +  S+  + L + + A G+ +  
Sbjct: 1   MSILNNSRIRVWGGFALAAIVLFAIAPAVL-----SDFRLSLLAKFLCFAIVAVGIGLAW 55

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI---------------WLLIPVSAMISGA 105
           G  G+L+L   + + IGAY   +        +                L        S  
Sbjct: 56  GRGGMLTLGQGVFFGIGAYVMAMHLKIADAELKGDAVPDFMSIAGKTELPGYWQPFASPF 115

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
             +   L         L +             I  + +    A + +  +       +  
Sbjct: 116 VAIFAILFLPAAVAFLLGLGVFKRRVKGAYFAILSQALAAAFAILLIGQQSIGGSNGLNR 175

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
              FF F  +    +  ++++  G+   S ++I  L  +        +RD ++    L  
Sbjct: 176 FRTFFGFNLNDPANKQMLFFIAAGVLLASVALIRQLMNSRYGELLVAVRDQEERVRFLGY 235

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                KL A+  ++   G+AGA F      ISP       +I  +  V +GG  +L    
Sbjct: 236 DPANIKLVAYVTAAFLAGIAGALFVPIVGIISPADVGIVPSIAFLIGVAIGGRATLLGPV 295

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
                +              +           +      V  LF ++  R
Sbjct: 296 LGAIGVAWAQSTFSEKLPSGWIYAQGLMFIVVVGFFPAGVAGLFALMRHR 345


>gi|116669718|ref|YP_830651.1| inner-membrane translocator [Arthrobacter sp. FB24]
 gi|116609827|gb|ABK02551.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Arthrobacter sp. FB24]
          Length = 322

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 56/294 (19%), Positives = 117/294 (39%), Gaps = 6/294 (2%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           +  G  GLL+       A+GAY + I    +G+  ++ + ++   S    +++G+P+L+ 
Sbjct: 31  VHFGYSGLLNFGQAGFMAVGAYGFAISTLSFGVPFFVGLLIAVACSAIFALLLGIPTLRL 90

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           R DYLAI T+  +EI + I+   +  +   +   +A       +                
Sbjct: 91  RADYLAIVTIAAAEIVRYIVTTNQLTSVTGSANGLAAFEGGFYSM---NPFPEGSYFGMN 147

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
             + F+  V  G+  +  +++  L R+      + IR+++ A  SL   +   K+ A  +
Sbjct: 148 NRDFFIRVVGWGLVIVCCTLVWLLMRSPWGRVLKGIREDENAVRSLGKNVYAYKMQALVI 207

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
                 +AG  F   R  + P  +       + + ++LGG+ ++        I   V+ L
Sbjct: 208 GGVLGALAGMIFTLPRGAVQPANYGTELTFFLYTCLLLGGLGTVLGPVVGAMIFWVVLSL 267

Query: 298 CCGMNFYYFNSLLKFDC---SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             G+ +    S                 L+ +AL L+++ R   +   +    F
Sbjct: 268 TQGILYGLIESGAVTWLNTVQAGQLRYILVGVALMLLMIFRPQGVFGNKKELAF 321


>gi|260655478|ref|ZP_05860966.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Jonquetella anthropi E3_33 E1]
 gi|260629926|gb|EEX48120.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Jonquetella anthropi E3_33 E1]
          Length = 297

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 94/303 (31%), Gaps = 22/303 (7%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +      +Y + A G ++V G L L++      + +GAY          L   + +P++ 
Sbjct: 12  NALTLGSLYALIAIGYTMVYGILRLINFAHGDIFMVGAYLVFWAVGTASLPWAVAVPLAI 71

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           + +   G+++   + K   +   I+ LI +     ++     +                 
Sbjct: 72  IGTAVAGILVDRVAYKPLREAPRISALISAIGVSFLIENLALVVF----------TGVPK 121

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
              R            +        V +    L   ++  L +T    A R I  + +  
Sbjct: 122 PMPRFAPLVKVMKFGNIRILPLAIVVPVITFLLVVGLLWILYKTPQGLAMRAISKDIETT 181

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             +   +       F + SA    AG  +A    +I+P M             + GG+ S
Sbjct: 182 RLMGVRVDRIIALTFGIGSALAAAAGIMWALRYPQINPFM-GVMPGFKAFIAAVTGGIGS 240

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +         L  +  L            + F  +          I L L++ ++   LL
Sbjct: 241 VQGAVIGGLTLGFLEILL-----------VAFFPALTGYRDAFAFILLILILFVKPTGLL 289

Query: 341 RLR 343
             +
Sbjct: 290 GEK 292


>gi|152970837|ref|YP_001335946.1| high-affinity branched-chain amino acid ABC transporter membrane
           protein [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|262041878|ref|ZP_06015062.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|330000402|ref|ZP_08303716.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Klebsiella sp. MS 92-3]
 gi|150955686|gb|ABR77716.1| high-affinity branched-chain amino acid transport protein (ABC
           superfamily, membrane) [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|259040783|gb|EEW41870.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|328538014|gb|EGF64187.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Klebsiella sp. MS 92-3]
          Length = 324

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/322 (12%), Positives = 86/322 (26%), Gaps = 14/322 (4%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
               L           + + +      +Y + A G ++V G +G+++      Y + AY 
Sbjct: 11  AAVCLAAGGAMTAFFLQQLINGLTLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMVSAYL 70

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             I  +          P+    +    +++                   + +   I    
Sbjct: 71  CAIGLALLSFFGIHSFPLLIFATLVFTIVVTGVYGWAIERIAYRPLRNSTRLAPLISAIG 130

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +                  T+ S           V       ++L+        +   
Sbjct: 131 MSLILQNYVQLSQGPNQQGIPTLLSGALRMTVGDGVVQITWTKVFILVAALVGMLILTWI 190

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           ++ T +    R  + +++    L           F + +A  G+AG     +        
Sbjct: 191 IQYTRLGRICRATQQDRRMAAILGINTDRVISLVFVIGAAMAGLAGVLVTMNYGTFDFY- 249

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
             F   I   +  +LGG+ SL        +L        G+    +  +  F        
Sbjct: 250 IGFIIGIKAFTAAVLGGIGSLPGAMLGGLLLGVAEAQFAGLVNSDYKDVFSF-------- 301

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
                  L  +++ R   LL  
Sbjct: 302 -----ALLVAILIFRPQGLLGR 318


>gi|28871219|ref|NP_793838.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|28854469|gb|AAO57533.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 391

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/353 (13%), Positives = 103/353 (29%), Gaps = 36/353 (10%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++ ++    L L +       +  +M  + L Y   A GL +  G  G+LSL   + + 
Sbjct: 13  GVIGLLILAALILLVFPLTLDAFRLNMIGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFG 72

Query: 76  IGAYSYVIL--------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           +G Y   +                +           ++ + +          S+      
Sbjct: 73  LGGYCMAMFLKLEASDPQSTKIQSTPGIPDFMDWNQITELPALWVPFHSFTFSVFAVIAV 132

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVA--------DRLYFLGTTVRSLIRFFRFP 173
             +   I+        +     +     I +           L      +  L     + 
Sbjct: 133 PVLLAWIIGTALFKRRVGDVYFSIVTQAIALILTVLIIGQQGLTGGINGITDLKTLLGWD 192

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
                 ++ +Y+V  G+      I  ++  + +      +RD ++        +   K+ 
Sbjct: 193 IRSDGAKLALYFVNAGLLLGCILIGKFILASKLGRLLMAMRDKEERVRFSGYDVAGFKIF 252

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            + V++ F  + GA FA     +SP       +I ++    +GG  SL      + ++  
Sbjct: 253 VYCVAAGFSAIGGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGSLLVNY 312

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                             F  SF      LM      V++     L  L    
Sbjct: 313 GKTY--------------FSESFPELWLYLMGGLFIAVVMYFPDGLAGLWESH 351


>gi|86135882|ref|ZP_01054461.1| ABC transporter permease protein [Roseobacter sp. MED193]
 gi|85826756|gb|EAQ46952.1| ABC transporter permease protein [Roseobacter sp. MED193]
          Length = 327

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 58/312 (18%), Positives = 112/312 (35%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             ++  LLL   +     + ++ ++  ++ I  +   GL+I +G  GL+SL     + IG
Sbjct: 9   AGILLALLLVPLMAWKMDEPFLITLATKVTILALAGVGLNIALGLGGLVSLGHAAFFGIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  IL S       L              ++ L ++        +   +         
Sbjct: 69  GYAMGILASHAQNYEPLFSWPFLFEGSNQMPLIWLVAVLASAAAALVIGALSLRTSGVYF 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I            +      + G    S+      P    +  I  + V   +  L+   
Sbjct: 129 IMITLAFGQMLYYFTISWSAYGGEDGLSIWVRNEMPGVNTLDPIQFFAVTFVILCLTLWF 188

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              + ++A   A    R +++   ++       +L AF +S A  G+AGA FA     +S
Sbjct: 189 AARVAQSAFGLALSAARQSEERVETVGLAPFKLRLIAFVISGAITGLAGALFADLNRFVS 248

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P M  +  +  ++  VILGG+  L       A+ I +  L  G++ Y+   L        
Sbjct: 249 PTMLSWHTSGEIMIFVILGGVGRLYGPVVGAAVYILLEHLLGGISEYWQIFLGLLLLGMV 308

Query: 318 MRHTTLMVIALF 329
           +     ++ AL 
Sbjct: 309 LFARGGLIGALL 320


>gi|121604807|ref|YP_982136.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120593776|gb|ABM37215.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 338

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 54/306 (17%), Positives = 115/306 (37%), Gaps = 18/306 (5%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                ++   M  +++I  +FA  L ++ G  GL+SL     + +  Y+   L  +    
Sbjct: 28  PFAGTEFYTEMVTRMMIMAIFAMSLDLLQGVTGLVSLGHAAYFGLAGYALAFLTPQGEPV 87

Query: 92  -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +W  +PV+ + SG   +I+G   ++ RG Y  + T+  +++   +    K +       
Sbjct: 88  SLWWTLPVAVLGSGLAALIIGFFVVRTRGIYFIMVTMAFAQMVFFLFFDNKALGGSDG-- 145

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                   L    R     F +    +  +  +YY  L    L  + +  L  +    A 
Sbjct: 146 --------LYINFRPSAALFGWVPFELDGKRTLYYFTLAAMLLVYAFLRRLLWSPFGRAL 197

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             IR N+    ++       KL+AF ++    G+AG  +      I+P++  F  +   I
Sbjct: 198 AGIRVNEHRMRAMGFYTFGYKLTAFTLAGGLAGLAGYLWGTQTGYINPELMGFQMSAHTI 257

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            +V+LGGM +++           ++ +   +             +        M + + L
Sbjct: 258 MMVVLGGMGNIAGAMVGAFTFEYLLHVFKDLPQVG-------SVNLGKHWQLWMGLFIVL 310

Query: 331 VILMRS 336
           ++    
Sbjct: 311 LVTFAP 316


>gi|53721021|ref|YP_110007.1| putative branched-chain amino acid ABC transporter integral
           membrane subunit [Burkholderia pseudomallei K96243]
 gi|52211435|emb|CAH37426.1| putative branched-chain amino acid ABC transporter integral
           membrane subunit [Burkholderia pseudomallei K96243]
          Length = 325

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 122/302 (40%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS    +  A   Y         G +  L +     
Sbjct: 27  FVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGTAPELGVLAGTA 86

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+++GL +++ +G Y A+ TL  +++   I ++                      
Sbjct: 87  AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 132

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  ++ +YYV+L +   +   I+ +  +        I++N+    
Sbjct: 133 GLQGVPRGRLFGLVDLSSDLALYYVVLVVIACACFFIVRIVHSPFGQVLVAIKENEPRAI 192

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+A  G+AGA         +     ++ + +V+ + ++GGM +L
Sbjct: 193 SLGYDTDRFKLLAFILSAALAGLAGALKVVVLGFETLSDAYWTMSGLVVLMTLVGGMGTL 252

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSL-LKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +    +  +  +   + +  S     T +  +   + +L     ++
Sbjct: 253 FGPLVGAALIVALEDRLGDIGGWLASVTHIDWFRSLGESATIVTGLIFIVCVLAFRRGIV 312

Query: 341 RL 342
             
Sbjct: 313 GE 314


>gi|300704063|ref|YP_003745665.1| ABC branched-chain amino acid transporter membrane component
           [Ralstonia solanacearum CFBP2957]
 gi|299071726|emb|CBJ43050.1| putative ABC-type branched-chain amino acid transporter, membrane
           component [Ralstonia solanacearum CFBP2957]
          Length = 440

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 114/333 (34%), Gaps = 17/333 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +   L      L+ + L     Q +  ++  Q+ I ++FA   ++++G  G+LS  
Sbjct: 23  RPFNLARWLIWGTTALVMIVLPLIWPQGFAITLLSQMGIMIIFALSYNMLLGQSGMLSFG 82

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
             +   +GA+  V L +R G S    + +   ++ A   + G       G      T   
Sbjct: 83  HAVYAGLGAFMAVHLLNRIGAS--QALGIGGPLAVALLPLAGGLGGALFGVLFGYVTTRK 140

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +    +++          + +   D     G    +                 +YY++  
Sbjct: 141 AGTTFSMITLGIGEMVFASALMFPDFFGGEGGVSTNRSIGEPLLGISFGPARQVYYLIAA 200

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
            C +S +++    +T +      +RDN +    +  +    +     +S+ F G+AGA  
Sbjct: 201 WCLISMALMYAWTQTPLGRIANAVRDNPERVEFIGYSTQRVRCLVVILSAFFAGIAGALS 260

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + + ++ +    + +  V+    +GGM +         + +       G+   +    
Sbjct: 261 CINFEIVTAENVSAARSGAVLLAAFIGGMGTFFGPIIGAVLTVFFTVALSGITKAW---- 316

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         + +   L+++     +  L
Sbjct: 317 -----------LLYLGLFFVLMVMYAPGGIASL 338


>gi|121595422|ref|YP_987318.1| inner-membrane translocator [Acidovorax sp. JS42]
 gi|120607502|gb|ABM43242.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Acidovorax sp. JS42]
          Length = 333

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 53/311 (17%), Positives = 123/311 (39%), Gaps = 15/311 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS          AY        +G +  L +    +
Sbjct: 30  FVMKLLCFALFASAFNLLLGYTGLLSFGHAAFLGGAAYVTGHAVKVWGATPELGLLAGLL 89

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
                G++MG  +++ +G Y  + T+ ++++     ++    T G+ G+    R      
Sbjct: 90  AGALLGLVMGFFAIRRQGIYATMITMALAQMLFFAALQAP-FTGGEDGLQGVPR------ 142

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F    +  ++ MYYV L +  ++  +I+    +      + I++N+    
Sbjct: 143 -------GKLFGVLDLSSDLTMYYVCLIVVVVAFLLIVRTIHSPFGQVLKGIKENEPRAI 195

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+A  G+AGA         +     +S +  V+ + ++GG+ +L
Sbjct: 196 SLGYDTNRFKLLAFVISAAIAGLAGALKTLVLGFATLTDVHWSASGHVVLMTLVGGLGTL 255

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           S     +A+++ +      +       + + +  +     T +  +   + +L     ++
Sbjct: 256 SGPLVGSAVVVLLENKIGELGTLLAQLTTIDWFNTLGESVTIVTGLIFVVCVLAFRRGIM 315

Query: 341 RLRTPSNFLER 351
                     R
Sbjct: 316 GEIIAWLERRR 326


>gi|260461187|ref|ZP_05809436.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259033221|gb|EEW34483.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 324

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 117/301 (38%), Gaps = 29/301 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS      +   AY        +G      I +   
Sbjct: 41  FLMKMLCFALFACAFNLLLGYTGLLSFGHATFFGGAAYFTAHAVKVWGWPPEAGILLGMA 100

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G++MG  +++ +G Y A+ TL +S++F    ++                      
Sbjct: 101 GAALLGLVMGFFAIRRQGIYFAMITLALSQMFFFFCVQA--------------PFTEGED 146

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R        +   + MYY +L +  +    +  +  +      R+IR+N+    
Sbjct: 147 GIQGVPRGVLLGVLDLNVSLNMYYFVLAVFLVGVFSVWRIVNSPFGMILRSIRENEGRAI 206

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL  ++   KL+AF +S+A  G+AG+  A      +     +  +  VI + +LGG+ ++
Sbjct: 207 SLGYSVAKYKLAAFVMSAALAGLAGSLKAIVFQFATLTDVTWQMSGEVILMTLLGGIGTM 266

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  ++++G+        F                 T    +   + +L+    ++ 
Sbjct: 267 VGPVIGASLVVGLENTLATSGFPV---------------TIATGLIFMVCVLIFRRGIVG 311

Query: 342 L 342
            
Sbjct: 312 E 312


>gi|257454525|ref|ZP_05619783.1| inner-membrane translocator [Enhydrobacter aerosaccus SK60]
 gi|257448087|gb|EEV23072.1| inner-membrane translocator [Enhydrobacter aerosaccus SK60]
          Length = 577

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/291 (11%), Positives = 88/291 (30%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       IGAY+  ++ S +   +   +    + +     ++       
Sbjct: 304 ITYGLLGVINMAHGELIMIGAYTTYVVQSFFKSHLAGYVDWYMLAAIPLAFLVSAVIGMI 363

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         + +      +  +  S +      +  +
Sbjct: 364 IER--VVIRPLYGRQLETLLATFGVSLILMQLVRMIFGAQNVEVSNISWLSGAVALTPSL 421

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++     +   ++  L+ T      R +  N++   ++        + AF +
Sbjct: 422 MLPYNRIAIIGFTIIVLLLLVFLLKYTRFGLFVRAVTQNRQMARAVGIRSARVDMMAFGL 481

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG   A   +         +  I    +V++GG+  +     A   L     +
Sbjct: 482 GSGLAGLAGCALAQVGNV--GPDLGQNYIIDAFLVVVVGGVGQIWGAVLAALGLGVSGTV 539

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                    ++++ + L I  R   L  L+     
Sbjct: 540 LEIGMGAVIAK-------------IILLVLVVLFIQKRPQGLFALKGRFVE 577


>gi|254180058|ref|ZP_04886657.1| ABC-transporter [Burkholderia pseudomallei 1655]
 gi|184210598|gb|EDU07641.1| ABC-transporter [Burkholderia pseudomallei 1655]
          Length = 797

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 4   ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 64  GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGSALAGWEFGKPMHAYALIAAWCVIAAV 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298


>gi|297623211|ref|YP_003704645.1| inner-membrane translocator [Truepera radiovictrix DSM 17093]
 gi|297164391|gb|ADI14102.1| inner-membrane translocator [Truepera radiovictrix DSM 17093]
          Length = 491

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 98/277 (35%), Gaps = 20/277 (7%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-------------YGLS 91
              I+ + A  L+++ G+ G+LSL       +G Y+  +L                    
Sbjct: 59  LFAIWGVAAISLNLINGTTGILSLGHHGFMLVGGYTTALLTLPEIRRQQIAESARSQMND 118

Query: 92  IWLLIPVSAMISGAC-------GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
             L + ++  +             +     +      L  A   +     ++ ++   + 
Sbjct: 119 FTLGLSLNNGLRALGLEALTTPETLWIRFLIALFIGGLVAALFGLLVGIPSLRLRGDYLA 178

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
               G     RL    + +          +          +   G   L+  ++   + +
Sbjct: 179 IVTFGFGEIIRLLASTSLLGPFTNGSLGYTGVPAQIGRSLWWTFGFLALTVFVMTKFKTS 238

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
           +   A + IR+++ A  ++   + + K+ AFA+S+ F G+AG  + +       D F F+
Sbjct: 239 SYGRALQGIREDEIAAEAMGVNLAYHKVLAFALSAFFAGVAGGLYTSWLSGARLDYFLFT 298

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
                +  + +GG  S + +   TA+++ V +    +
Sbjct: 299 LTFFFLVAISVGGTGSYTGVLLGTALVVFVRQYGDPL 335


>gi|296534308|ref|ZP_06896785.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, ABC protein [Roseomonas cervicalis ATCC
           49957]
 gi|296265374|gb|EFH11522.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, ABC protein [Roseomonas cervicalis ATCC
           49957]
          Length = 318

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 69/331 (20%), Positives = 123/331 (37%), Gaps = 29/331 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L  +  LL  L L    +   + +  +  LI  + A G +++ G  G LS      +  G
Sbjct: 6   LIPLVLLLGALALTPLFASNLLLNFLVSALIIALGAQGWNLLGGYGGQLSFGHAALFGTG 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQN 135
           AY+  IL  + GL+ W        ++   G ++G  S +   RG Y A+ TL  +E+ + 
Sbjct: 66  AYATAILQMKLGLNAWAGFAAGVALAALAGWVIGFLSFRARLRGSYFALVTLAFAEVLR- 124

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           IL      T G AG+ +  +         +                   +V+L      A
Sbjct: 125 ILANAADFTGGAAGLLIKLQPGLANLQFATRAE--------------ALWVVLACILAVA 170

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + LW+ R         +R+N+ A  +L   ++  KL A  +S A  G AG  +A +   
Sbjct: 171 LLTLWIDRGRFGAHLVAVRENEDAARALGVDVLATKLRAITLSGAITGAAGCLYAQNFLY 230

Query: 256 ISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           +  +  +    ++ ++   I+GG+ ++         L GV E+  GM  +          
Sbjct: 231 LDANIAYGTWISVELLIAAIVGGLGTVLGPVIGALALHGVGEITKGMLGWL--------- 281

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                   L  I L   +      L+     
Sbjct: 282 --TGIDLVLFGIILIAAVAFVPAGLVGALRR 310


>gi|237653748|ref|YP_002890062.1| inner-membrane translocator [Thauera sp. MZ1T]
 gi|237624995|gb|ACR01685.1| inner-membrane translocator [Thauera sp. MZ1T]
          Length = 321

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 69/321 (21%), Positives = 128/321 (39%), Gaps = 26/321 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
              L  +       + +   M  ++L+  +FA  L ++VG  GL+S      + I AY+ 
Sbjct: 11  LVALAIVACVPLSGESFYIEMVGKVLVMAIFAMSLDLLVGFTGLVSFGHAAYFGIAAYAV 70

Query: 82  VILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
            IL   Y   S+W ++P S  +S     ++GL  L+ +G Y  + TL  +++   I    
Sbjct: 71  AILSPEYEAASLWYVLPASVGLSALAAFVIGLFVLRTKGIYFIMVTLAFAQMAYFIFHD- 129

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
            P+  G  G Y+ ++              F +    +  E+ M+Y +L +  L    +  
Sbjct: 130 TPLGGGSDGKYLNNKPS---------ASIFGWEPFDLTNEVHMFYFVLAVLVLVYLFLAR 180

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           + ++        I+ N+    SL       KL AF ++ A  G+AG  +A     ++P++
Sbjct: 181 VLQSPFGRVLVGIKSNEHRMQSLGYYTFRYKLGAFTLAGALGGLAGFLYAVLSGFVTPEL 240

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
             + E+  V+ +VILGGM +L                      + F ++ +         
Sbjct: 241 LSWHESGNVLLMVILGGMGNL---------------AGAIAGAFAFEAMREIFADITKYW 285

Query: 321 TTLMVIALFLVILMRSHSLLR 341
             LM   +  V+L     L  
Sbjct: 286 QLLMGGVIVAVVLFLPGGLAG 306


>gi|134282672|ref|ZP_01769375.1| ABC-transporter [Burkholderia pseudomallei 305]
 gi|134245758|gb|EBA45849.1| ABC-transporter [Burkholderia pseudomallei 305]
          Length = 794

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 51/322 (15%), Positives = 107/322 (33%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 13  ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 72

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+  V      A G + G  + +  G   A+ TL + E+    
Sbjct: 73  GAFVAAHGFNRYGLPLPLVPLVGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 132

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 133 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVIAAV 180

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 181 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 240

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 241 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 289

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 290 ----LLYLGLLFVAVVLAAPGG 307


>gi|115526589|ref|YP_783500.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115520536|gb|ABJ08520.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 384

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/328 (13%), Positives = 90/328 (27%), Gaps = 36/328 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL----------- 84
             +  ++  + L Y   A GL +  G  G+LSL   + + +G Y   +            
Sbjct: 32  DIFRLNLVAKYLSYAFVAIGLVLCWGFGGILSLGQGVFFGMGGYCMAMYLKLEASSVANT 91

Query: 85  -GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
                      +                  +L         A             +   +
Sbjct: 92  KIQSTPGIPDFMDWNQLTQIPWFWQPYHSLTLTILSILTLPALFAFVIGAAMFKRRVGGV 151

Query: 144 TNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLLGMCFL 193
                   VA  L  L    +                 +       +  +Y+V + + F 
Sbjct: 152 YFAIITQAVAAILTILIIGQQGYTGGINGITDLRTLQGWDIRPDHAKFVLYFVEVVLLFG 211

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              + L++R +        +R+ +        ++   K+ AF +++ F  + GA F  + 
Sbjct: 212 CILLALFVRHSKFGRVLVAMREKEDRVRFSGYSVANFKIFAFCLAAMFAAVGGAMFTLNV 271

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             +SP       +I ++    +GG  S+      T ++                      
Sbjct: 272 GFMSPSFVGIVPSIEMVIYTAVGGRMSIFGAVYGTLLVSFAKTGLSE------------- 318

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
            SF       +      V+L   + L  
Sbjct: 319 -SFPQLWLFGLGALFIAVVLAFPNGLAG 345


>gi|120612149|ref|YP_971827.1| inner-membrane translocator [Acidovorax citrulli AAC00-1]
 gi|120590613|gb|ABM34053.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 385

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/347 (12%), Positives = 94/347 (27%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I          L      A     Y  ++  +I+ Y + A  + ++ G  G+LSL   + 
Sbjct: 29  IAVCAVAPVLNLWVPAGSAFHLSDYAVALVGKIMCYAICALAMDLIWGYTGILSLGHGLF 88

Query: 74  YAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           +A+G Y   +                        W  +P    +S +    + L      
Sbjct: 89  FALGGYVMGMYLMRQIGRDGNYKSDLPDFMVFLDWKELPWHWALSDSFIATLVLIVAVPG 148

Query: 119 GDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                                +I            +  +  +          R   F  +
Sbjct: 149 LVAFVFGYFAFRSRIKGVYFSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGFALA 208

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                + ++ +          +  WL  +      + IRD +        + +  KL+ +
Sbjct: 209 TQHMRMLLFVLTGLALLGFFLLGRWLVGSRFGRVLQAIRDAETRVMFSGYSPLPYKLAIW 268

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            +S+   G+AGA +      I+P     + +I +     +GG  +L+       ++ G  
Sbjct: 269 TISAMMCGVAGALYVPQVCIINPGEMSAANSIEIAVWAAVGGRATLAGPIAGAFLVNGAK 328

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                              +        +      V L     +  L
Sbjct: 329 SWLT--------------VTAPEFWLYFLGALFIAVTLFLPQGVAGL 361


>gi|170078692|ref|YP_001735330.1| high-affinity branched-chain amino acid transport protein
           [Synechococcus sp. PCC 7002]
 gi|169886361|gb|ACB00075.1| high-affinity branched-chain amino acid transport protein
           [Synechococcus sp. PCC 7002]
          Length = 366

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 61/366 (16%), Positives = 118/366 (32%), Gaps = 56/366 (15%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y+  + I    Y +F  GL++  G  GL++   V    +GAY+ V+L S+    +  L  
Sbjct: 4   YLVYLTISAATYGIFCLGLNLQWGFTGLINFGHVAFMTVGAYATVLLSSQGVPLLLSLAI 63

Query: 98  VSAMIS------------------------------------------GACGMIMGLPSL 115
            + + +                                                  LP  
Sbjct: 64  GAGVAALLGLLIGLSTLRLREDYLAIVTIGVSELVRLVALNEEWLTRGAFGVQGYPLPLG 123

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNG-----------KAGIYVADRLYFLGTTVR 164
            FR + +   +LI       I   W+                K+G+ V       G  + 
Sbjct: 124 SFRPNQVGKISLIFWLTIIAIFAAWQLWRGLRWRWKKLKKQEKSGLGVIVWGILGGGIIT 183

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           SL            Y+  +  + +    L  + + +L ++      + IR++++   +L 
Sbjct: 184 SLFINGCIALQNYNYKAGLMLLSVVALTLVYAGLEYLVQSPWGRVLKAIREDEEIPRALG 243

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
             + + KL AF +  A  G AG+F+A     + P  F         +IV+LGG  +    
Sbjct: 244 KNVFWYKLQAFMLGGAIAGGAGSFYAWQLTNVYPANFDPLVTFNAWTIVVLGGAGTNPGT 303

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                I      L   +        L  D         ++ + L ++++ R   +L  + 
Sbjct: 304 LIGALIFFAYDSLTRFVLPQLN---LVDDARLGALRIMVIGLILMVLMVWRPQGILGNKD 360

Query: 345 PSNFLE 350
                +
Sbjct: 361 ELTLGK 366


>gi|91791096|ref|YP_552046.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91700977|gb|ABE47148.1| inner-membrane translocator [Polaromonas sp. JS666]
          Length = 357

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 70/341 (20%), Positives = 143/341 (41%), Gaps = 25/341 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           S+F +  +++        +   L   L    T S   + +  +  L++     GL++++G
Sbjct: 18  SLFPIPADRWM-------IGLLLAFALTAPFTMSSLVLSTQLLPWLVWTSAVLGLNLILG 70

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G           IGAY+  + G+R G+   + + +  +++   G++    +L+ +G Y
Sbjct: 71  WAGQFHFGYAAIMGIGAYT-AVHGARNGIPWEIAVVLGGVMASVIGIVFAFAALRVKGLY 129

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LA++TL +  +   ++     I+ G      A                 R     V  E 
Sbjct: 130 LALSTLALQFVMDWVISHVPAISGGSQATLQAPA--------------MRLLGQTVTSES 175

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +YY+ LG C L    +L LRRT +  A   +R+   A   +    ++ KL AFA SS  
Sbjct: 176 GLYYMALGWCLLVTVFMLNLRRTGLGRALVAVREKDFAAAVIGVHSLYYKLVAFATSSFI 235

Query: 242 IGMAGAFFAASRDRI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
            G++GA    +  R+ +P+ F  + +I ++++VI+GG+ S+       A ++ +  L   
Sbjct: 236 GGVSGAILIFTFYRVATPEQFAVNVSIELLAMVIVGGLGSIIGSYFGAAFILLMPGLMNS 295

Query: 301 MNFYYFNSLLKFDCSFNMRHT--TLMVIALFLVILMRSHSL 339
           +  +    +        + H    +    + + +L+    L
Sbjct: 296 LIAWLAQLMGISLGVETLAHIPHAVYGALIIIFLLVEPMGL 336


>gi|242279019|ref|YP_002991148.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638]
 gi|242121913|gb|ACS79609.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638]
          Length = 300

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 96/299 (32%), Gaps = 17/299 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
             +  IY + A G ++V G + L++      Y IGA+  +++        +    +  + 
Sbjct: 12  LTRGSIYALIALGYTMVYGIIELINFAHGEIYMIGAFVGLVVAGILTSFGFPAASIIVLA 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           S A  +                          + LI    ++       +  +     + 
Sbjct: 72  SIAAIIYAAAYGYTLEKIAYRPLRDA---PRLSPLISAIGMSIFLQNYVMLSQTSDFLSF 128

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
              +  F        +     + +++    +  ++ L+++ T +  A R    N+K    
Sbjct: 129 PNLIPEFHFLGKFESMIGSSDFVIIVVAAVVMVALNLFIKFTRMGKAMRATAQNRKMAML 188

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +     + F + SA   + G   A+   +I+     F   I   +  +LGG+ S+ 
Sbjct: 189 VGINVDQVISATFVIGSALAAVGGVLIASHIGQINFF-IGFIAGIKAFTAAVLGGIGSVP 247

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  IL      C G     +  +  F               L L+++ R   LL 
Sbjct: 248 GAMLGGLILGWTESFCTGYVSSDYEDVFAF-------------ALLVLILIFRPSGLLG 293


>gi|332653976|ref|ZP_08419720.1| branched-chain amino acid ABC transporter, permease protein
           [Ruminococcaceae bacterium D16]
 gi|332517062|gb|EGJ46667.1| branched-chain amino acid ABC transporter, permease protein
           [Ruminococcaceae bacterium D16]
          Length = 306

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 96/311 (30%), Gaps = 15/311 (4%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 Y+        IY + A G ++V G   +L+        +GAY+     +     
Sbjct: 3   FLTLLDYLIRGLSLGSIYAIIALGYTMVYGIAKMLNFAHGDVIMVGAYACFFTVTGMSPM 62

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
                  + ++    G+++ +      G  +            ++ +    I        
Sbjct: 63  FEEGSVAAMVVPALAGVVLSMVVCTALGVVIEGLAYKPLRQAPSLAVLITAIGVSYFLQN 122

Query: 152 VADRLYFLGTTVRSLIRFFR-FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            A  L+     + S I          +         ++    +   + L+  +T +  A 
Sbjct: 123 AALLLWSSSPKIFSPIVGSGQLQVGPLNISYVTLVTIVACIVIMVCLTLFTGKTKMGKAM 182

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R + +++ A   +   +       FA+ SA   +AG    ++   ++P        I   
Sbjct: 183 RAVSEDKGAAQLMGINVNRTISMTFAIGSALAAIAGVLLCSAYPTLTPTT-GSMPGIKAF 241

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  + GG+ S+        +L  +            ++ + F               L +
Sbjct: 242 TAAVFGGIGSIPGALLGGLLLGIIEIFASAYISTQLSTAVVFG-------------VLIV 288

Query: 331 VILMRSHSLLR 341
           V+L++   LL 
Sbjct: 289 VLLVKPAGLLG 299


>gi|196041926|ref|ZP_03109214.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus NVH0597-99]
 gi|196027298|gb|EDX65917.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus NVH0597-99]
          Length = 333

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 60/325 (18%), Positives = 129/325 (39%), Gaps = 31/325 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 15  VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  R      + ++ I  + +IS     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 75  VALLFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YYV L    +   +
Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L  +    
Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
            R T ++ +   +V+L+    L+  
Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGT 311


>gi|207744835|ref|YP_002261227.1| abc transporter (partial sequence c terminus) transmembrane protein
           [Ralstonia solanacearum IPO1609]
 gi|206596245|emb|CAQ63172.1| abc transporter (partial sequence c terminus) transmembrane protein
           [Ralstonia solanacearum IPO1609]
          Length = 292

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 55/290 (18%), Positives = 110/290 (37%), Gaps = 15/290 (5%)

Query: 54  WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113
            GL   VG  GLLS      +    Y    L     L+  L +          G+++GL 
Sbjct: 7   LGLQPAVGYTGLLSFGHAAFFGGAGYMAGYLMRDLHLTPELGLVAGTAAGALIGLVVGLL 66

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
           +++ +G Y A+ TL ++++F    ++    T G+ G+    R                F 
Sbjct: 67  AIRRQGIYFAMITLALAQMFYFFCLQAP-FTGGEDGLQGVPR-------------GKLFG 112

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
              +  ++ +YY +L +   +  +I+    +      + I++N+    SL       KL 
Sbjct: 113 VLDLSSDLTLYYFVLVVVVAAFLVIVRTIHSPFGQILKAIKENEPRAISLGYDTDRFKLL 172

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
           AF +S+A  G+AGA         +     ++ +  VI + ++GG+  LS      A++I 
Sbjct: 173 AFVLSAALSGLAGALKTLVLGFETLTDVHWAMSGSVILMTLVGGLGILSGPILGAALVIA 232

Query: 294 VVELCCGMNFYYFNSLLKFDCS-FNMRHTTLMVIALFLVILMRSHSLLRL 342
           +      +  +          +      TT+      + +L     ++  
Sbjct: 233 LENKLGDIGTFLAGVTGVDGFNVLGESVTTVTGAIFVICVLTFRRGIMGE 282


>gi|300117539|ref|ZP_07055326.1| branched chain amino acid ABC transporter permease [Bacillus cereus
           SJ1]
 gi|298725074|gb|EFI65729.1| branched chain amino acid ABC transporter permease [Bacillus cereus
           SJ1]
          Length = 333

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 60/325 (18%), Positives = 128/325 (39%), Gaps = 31/325 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 15  VCMLICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  R      +  + I  + +IS     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 75  VALLFDRQGVSITNFLIGIIAAIIISAMVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YYV L    +   +
Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L  +    
Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
            R T ++ +   +V+L+    L+  
Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGT 311


>gi|114766862|ref|ZP_01445784.1| branched-chain amino acid ABC transporter, permease protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114540908|gb|EAU43968.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. HTCC2601]
          Length = 412

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/367 (13%), Positives = 101/367 (27%), Gaps = 36/367 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +  +   +  +   +L    G             + L  ++ A  + +V G  G+LSL  
Sbjct: 14  WFLLALGIFALIVTVLSEAAGNGMISTSFVKTLGKTLCLMLVAVAMDVVWGYTGILSLGH 73

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLL-------------------------------IPVS 99
           +  + +G Y   +        I +                                 P  
Sbjct: 74  MAFFGLGGYMIGMWLMYARTEIIVTESLLAAALPPTPQEIHDSIGTQIFGVVGSSQFPAI 133

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + + +  + + +  L      L    L        + +         A      +    
Sbjct: 134 WIFAHSFWLQIAMVVLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLYLFQNESG 193

Query: 160 GTTVRSLIRFFRFPSSFVI----YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                 L      P    +      I  ++       L   +  W+      +  R IRD
Sbjct: 194 LRGNNGLSGLQNLPGLDDVPQSTLSIAFFWASAAALGLGYVLFAWVTSGKFGSVIRGIRD 253

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N+     L   +   KL  F ++    G+AGA +      I+P+      +I +   V +
Sbjct: 254 NESRVRFLGYHVEGYKLFVFTLTGIVAGIAGALYYPQAGIINPNEIAPIASIYLAVWVAI 313

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG   L   A   A++  +                 +   +      L+ ++   V L+ 
Sbjct: 314 GGRGRLYGAALGAALVSLLSSWFTSGAVPSVPLGF-YTIQWTDWWLVLLGVSFVAVTLLA 372

Query: 336 SHSLLRL 342
              +  L
Sbjct: 373 PKGIGGL 379


>gi|222111635|ref|YP_002553899.1| inner-membrane translocator [Acidovorax ebreus TPSY]
 gi|221731079|gb|ACM33899.1| inner-membrane translocator [Acidovorax ebreus TPSY]
          Length = 333

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 54/311 (17%), Positives = 123/311 (39%), Gaps = 15/311 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS          AY        +G +  L +    +
Sbjct: 30  FVMKLLCFALFASAFNLLLGYTGLLSFGHAAFLGGAAYVTGHAVKVWGATPELGLLAGLL 89

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
                G++MG  +++ +G Y  + TL ++++     ++    T G+ G+    R      
Sbjct: 90  AGALLGLVMGFFAIRRQGIYATMITLALAQMLFFAALQAP-FTGGEDGLQGVPR------ 142

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F    +  ++ MYYV L +  ++  +I+    +      + I++N+    
Sbjct: 143 -------GKLFGVLDLSSDLTMYYVCLIVVVVAFLLIVRTIHSPFGQVLKGIKENEPRAI 195

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+A  G+AGA         +     +S +  V+ + ++GG+ +L
Sbjct: 196 SLGYDTNRFKLLAFVISAAIAGLAGALKTLVLGFATLSDVHWSASGHVVLMTLVGGLGTL 255

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           S     +A+++ +      +       + + +  +     T +  +   + +L     ++
Sbjct: 256 SGPLVGSAVVVLLENKIGELGTLLAQLTSIDWFNTLGESVTIVTGLIFVVCVLAFRRGIM 315

Query: 341 RLRTPSNFLER 351
                     R
Sbjct: 316 GEIIAWLERRR 326


>gi|83311702|ref|YP_421966.1| ABC-type branched-chain amino acid transport system
           [Magnetospirillum magneticum AMB-1]
 gi|82946543|dbj|BAE51407.1| ABC-type branched-chain amino acid transport system
           [Magnetospirillum magneticum AMB-1]
          Length = 320

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 66/329 (20%), Positives = 124/329 (37%), Gaps = 28/329 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              +A            A  S  Y+  + +  L     A   +++    G++S      +
Sbjct: 4   WIKIAAFLAFSYIAVPLALGSNAYVIGLLVAALTIGGIAVAWALLGNLGGMVSFGHAAFF 63

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY   +L  R G  ++  + V+ + +    +    P+L+ RG Y A+A L  +EIF+
Sbjct: 64  GVGAYVSALLTLRGGWPVFPAMLVAGLGAAIASVATM-PALRLRGPYFALAILAYAEIFR 122

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  + KPIT G AG+    RL                       ++  Y+V+L +   +
Sbjct: 123 ILATELKPITGGAAGLLSIPRLPN-------------VLGLDFGTKLGGYFVILTIVVAA 169

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    +RR+    A + + D++ A   +       K     VS+   GM GAF A   +
Sbjct: 170 MAAYHLIRRSPYGLALKAMHDSEDATRVVGVNSTLLKAWMLVVSAFITGMVGAFNAHYIN 229

Query: 255 RISPDMFKFSENIIVISI-VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
            + PD     +   +  +  I GG  ++S       ++  V +L              F 
Sbjct: 230 FLEPDYAFAGQWTTLAIVSAIFGGYRTVSGPLVGAVVVYLVDQL-------------AFK 276

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 H  ++ + L  +IL     L+ +
Sbjct: 277 PILPQGHQIVLGVLLGAMILFSPGGLMPM 305


>gi|86358914|ref|YP_470806.1| urea or short-chain amide ABC transporter, permease protein
           [Rhizobium etli CFN 42]
 gi|86283016|gb|ABC92079.1| probable urea or short-chain amide ABC transporter, permease
           protein [Rhizobium etli CFN 42]
          Length = 387

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 109/357 (30%), Gaps = 35/357 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLG--ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
           R++    +L  +A++ P+L              YI ++  + L Y + A  L +V G  G
Sbjct: 13  RISVAVALLLAIAILVPILNLATSPSHPLHIPTYIMALFGKYLTYALLALALDLVWGFCG 72

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           +LSL     +A+G Y+  +   R   S  +                 LP   +  D    
Sbjct: 73  ILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGDPVLPDFMVFLNWKELPWFWYGFDQFWF 132

Query: 125 ATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRS 165
           A L++  +   +   +                             +  D  +     +  
Sbjct: 133 AALMVLAVPGLLAFVFGWFAFRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGMTD 192

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                 F          ++        LS +I   + R+        +RD +     L  
Sbjct: 193 FKDILGFNIQADGTRASLFAATAIFVALSLTIASAIVRSKFGKVLVGVRDAEGRTRFLGY 252

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
            +   KL  F VS+   G+AGA +      I+P  F  + +I V+    +GG  +L    
Sbjct: 253 RVEHFKLFTFVVSAMMAGIAGALYVPQVGIINPGEFAPANSIEVVIWTAVGGRGTLIGPI 312

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               ++ G   +  G+              F       +      V L     ++  
Sbjct: 313 IGAILVNGGKTIFTGL--------------FPEFWLFALGGLFVAVTLFLPRGVVGT 355


>gi|312622382|ref|YP_004023995.1| inner-membrane translocator [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312202849|gb|ADQ46176.1| inner-membrane translocator [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 294

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 91/289 (31%), Gaps = 10/289 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + + G ++V G + L++      + +GAY   +  +   L +   + +
Sbjct: 8   LINGITLGSIYALISLGYTMVYGIIKLINFAHGDIFMVGAYIAYLSVTYLKLGLIPSLII 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S M     GM++   + K   +   I+ LI +     +L     I  G         +  
Sbjct: 68  SMMFCSILGMLIEKFAYKPLRNSPRISALITAIGVSLLLENLMQIVMGADSRVFPRLVDE 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +            +++    +  ++L             +RT +  A R +  +  
Sbjct: 128 KNYHLFQSKIVINNKQIYLLIITIILMIILNFVV---------KRTKVGKAMRAVSQDMD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA    AG       + I+P M      +      + GG+
Sbjct: 179 AARLMGINVDTTISYTFAIGSALAAAAGVLVGLYYNTINPLM-GVLPGLKAFIAAVFGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +         L  +  L  G     +   + F     +       + 
Sbjct: 238 GIIPGAMLGGFSLGIIETLVSGYGSSMYKDAVAFALLILILIIKPSGLL 286


>gi|302059926|ref|ZP_07251467.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato K40]
          Length = 529

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAMIGMV 315

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 374 VLPYNRIVIIAFALFVVLLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVTAAFGLGIANKI 491

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526


>gi|169334653|ref|ZP_02861846.1| hypothetical protein ANASTE_01056 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257391|gb|EDS71357.1| hypothetical protein ANASTE_01056 [Anaerofustis stercorihominis DSM
           17244]
          Length = 292

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 83/279 (29%), Gaps = 12/279 (4%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           Y + A G ++V G + L++        +G Y         G+       ++ ++    G+
Sbjct: 18  YALIALGYTMVYGIINLINFAHGDILMVGGYIGFFCAYTLGIGFIPATLIAMVVCALLGV 77

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
           ++   + +   +   I  LI +     +L        G            + T       
Sbjct: 78  VIEKVAYRPLRNAPRITLLITAIGVSFLLEYAMMYFVGPD----------VKTYPSGFFG 127

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                   +        V L    L  ++   + +T I  + R +  +  A   +  ++ 
Sbjct: 128 LGYISLGGLSISSDKLMVTLITLVLMVALQFLISKTKIGKSMRAVSSDPDAAQLMGVSVD 187

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
            A    F + SA   +AG  + A        +   +  +      + GG+ S+       
Sbjct: 188 KAISFTFLIGSALAAVAGVMYGAMFTI--NPLSGMTPGLKAFIAAVFGGIGSIPGAIVGG 245

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             L  +  L  G     +   + F     +       + 
Sbjct: 246 VSLGLIETLVSGYLSSAYKDAVAFAILIIILIVKPSGLL 284


>gi|167838443|ref|ZP_02465302.1| putative branched-chain amino acid ABC transporter integral
           membrane subunit [Burkholderia thailandensis MSMB43]
          Length = 325

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 122/302 (40%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS    +  A   Y         G +  L +     
Sbjct: 27  FVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGATPELGVLAGIA 86

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+++GL +++ +G Y A+ TL  +++   I ++                      
Sbjct: 87  AATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQA--------------PFTHGED 132

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +  ++ +YYV+LG+   +   I+ +  +        I++N+    
Sbjct: 133 GLQGVPRGRLFGLVDLSSDLALYYVVLGVVACACFFIVRIVHSPFGQVLVAIKENEPRAT 192

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+A  G+AGA         +     ++ + +V+ + ++GGM +L
Sbjct: 193 SLGYDTDRFKLLAFILSAALAGLAGALKVVVLGFETLSDAYWTMSGLVVLMTLVGGMGTL 252

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSL-LKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  A+++ + +    +  +  +   + +  S     T +  +     +L     ++
Sbjct: 253 FGPLVGAALIVALEDRLGDIGGWLASVTHIDWFRSLGESATIVTGLIFIACVLAFRRGIV 312

Query: 341 RL 342
             
Sbjct: 313 GE 314


>gi|302336888|ref|YP_003802094.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
 gi|301634073|gb|ADK79500.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
          Length = 302

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 96/299 (32%), Gaps = 17/299 (5%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
            +  IY + A G ++V G + L++      Y IGA++ +I+           +P  A+ +
Sbjct: 15  TRGSIYALLALGYTMVYGIIQLINFAHGEIYMIGAFTALIVAGVLT---LSGMPTLAIFA 71

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
            A  + +                 +      ++LI    ++       +  +        
Sbjct: 72  IALVVAVVYAMGYGYTIEKMAYKPLRQAPRLSVLISAIGMSMFLQNYVLLAQTSDFQPFP 131

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
             +  F        I      ++L+    +   + + +R T    A R    ++     +
Sbjct: 132 ALIPEFAFLEPYRKIISSSQLFILITTAIVMVLLTVLIRYTRTGKAMRATSQDKTMAMLV 191

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              +     + F + S    + G   ++   +I+     F   I      +LGG+ S+  
Sbjct: 192 GINVNKVISTTFIIGSGTAALGGLLISSHIGQINFY-IGFIAGIKAFVAAVLGGIGSIPG 250

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               + +L        G+    +  +  F             + L L+++ R   LL  
Sbjct: 251 AVLGSFVLGMTESFGTGLVSSDYEDVFAF-------------VFLILILIFRPEGLLGR 296


>gi|209885513|ref|YP_002289370.1| inner-membrane translocator [Oligotropha carboxidovorans OM5]
 gi|209873709|gb|ACI93505.1| inner-membrane translocator [Oligotropha carboxidovorans OM5]
          Length = 322

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/323 (15%), Positives = 116/323 (35%), Gaps = 29/323 (8%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V  +++ +   A           +Q L + +FA   ++++G  GLLS    +      Y
Sbjct: 20  IVGFIVMAVLFAAVPLTGIYPYFVMQALCFALFACAFNLLIGYSGLLSFGHSMFLGTAGY 79

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                   +G+   L I +    +    +I G  +++ +G Y A+ TL ++++   I ++
Sbjct: 80  FTAYSLKAWGVPPALGILIGVFAAAVLSVITGAIAIRRQGIYFAMITLALAQLMYFIYLR 139

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                                  ++ +     F    + +E  +YYV+L +  L+  +I 
Sbjct: 140 --------------SPFTGGEDGIQGIPLGKLFGIFDLTHETTLYYVVLTVFLLAFLLIH 185

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +      ++IR+N+    SL       KL AF +S    G+AG+         S  
Sbjct: 186 RIVNSPFGEVLKSIRENEPRAISLGYKADQYKLMAFILSGTLAGLAGSMKIFVSQNASLT 245

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
              ++ +  V+ + ++GG+ +         +++ + +                       
Sbjct: 246 DVHWTMSGEVVLMTLVGGLGTSFGPIVGAFVIVAMQQYLASF---------------GQW 290

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
              +      + +L     ++  
Sbjct: 291 VMVMQGAVFIICVLTFRRGIIGE 313


>gi|160899766|ref|YP_001565348.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160365350|gb|ABX36963.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 308

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 52/311 (16%), Positives = 105/311 (33%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G ++V G +G+++      Y IGAY  ++  S            
Sbjct: 12  LFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGDIYMIGAYIGLVTLSAIGTTSGLPVWA 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            I L++ VS  ++G  G+++   + K       +  LI +      L  W  +  G    
Sbjct: 72  IIGLMLVVSVFVTGVYGLVVEQVAYKPLRRSPRLVALISAIGMSIFLQNWVALGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   + + +   +RF       +        +++    L   + L++R + +  A 
Sbjct: 129 ----RDMAVPSLLPGALRFGAEGGFEIYVPYSRILIIVVAIVLMVLLTLYIRHSRMGRAS 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    +      L           F + +    + G   A +  +++P    F   I   
Sbjct: 185 RACAQDMHMASLLGIDTNRVISFTFVLGAMLAAVGGVLIALAVGKLNPF-IGFLAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L              +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGVAETFAAAYISSEYKDIVAFG-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|86751526|ref|YP_488022.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86574554|gb|ABD09111.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 318

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 64/309 (20%), Positives = 112/309 (36%), Gaps = 29/309 (9%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
                YI  + I  LI++  A  L++V G  G LS   +  + +G Y   I     G S 
Sbjct: 24  MTGSNYIVGIAISGLIFLTAAAALNLVYGYAGQLSFAQLGFWGVGGYCAAIAVVDLGQSF 83

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           W  I  + +++    +++G+   +       + TL  + +   I   W  +T G  GI  
Sbjct: 84  WFGIAFAGVVNLLLSVVIGIVITRTTRHAFVVVTLTFALLAGLIARDWVGVTRGPLGIPG 143

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                 +G    +  RF              YY+ L    ++ + +  L+ + I    + 
Sbjct: 144 LPPPSLMGFAFDTGARF--------------YYIALVFALIALAFLYSLKTSRIGLILKA 189

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I+ N     S        KL+AF ++S   GMAG  +A +   I P    F      + I
Sbjct: 190 IKQNDPLVESQGIAPGPYKLAAFVIASVITGMAGGIYAFNLKVIDPSFLDFYYMQTFLII 249

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           VI+GG  S   +  A A ++ + E                    N     +  + L  V+
Sbjct: 250 VIIGGAGSFWAVVLAGAAMVVLPEALRF---------------SNELRMVIYGVVLVAVM 294

Query: 333 LMRSHSLLR 341
           +     +  
Sbjct: 295 MFMPRGVAG 303


>gi|291085382|ref|ZP_06352917.2| branched-chain amino acid ABC transporter, permease protein
           [Citrobacter youngae ATCC 29220]
 gi|291070807|gb|EFE08916.1| branched-chain amino acid ABC transporter, permease protein
           [Citrobacter youngae ATCC 29220]
          Length = 526

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 77/288 (26%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY   I+    G      +    +I+     +        
Sbjct: 253 ITYGLLGVINMAHGEMLMLGAYCTWIVQQLMGQFFPHWLAWYPVIALPVAFLFTAAVGML 312

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      L     + +       + +
Sbjct: 313 LER--GVIRHLYGRPLETLLATWGISLMLIQLVRMTFGAQNLEVANPAWLSGGIQVYANL 370

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       VL     +     L L +T +    R +  N+              + AF +
Sbjct: 371 ILPWNRIVVLGFATLVLFFTWLLLNKTRLGLRVRAVTQNRNMAACCGVPTGRVDMLAFGL 430

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +         S  I    +V+LGG+  L+    A   L    ++
Sbjct: 431 GSGIAGLGGVALSQLGNV--GPELGQSYIIDSFLVVVLGGVGQLAGSVAAAFGLGIFNKI 488

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      ++                        R   L  L+  
Sbjct: 489 LEPQVGAVLGKIIILVLIILFIQK-------------RPQGLFALKGR 523


>gi|163794738|ref|ZP_02188708.1| inner-membrane translocator [alpha proteobacterium BAL199]
 gi|159180011|gb|EDP64536.1| inner-membrane translocator [alpha proteobacterium BAL199]
          Length = 301

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 98/309 (31%), Gaps = 26/309 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS-----YVILGSRYGLSIW 93
           + +      IY + A G ++V G +G+++      Y I A+        +  +   ++I 
Sbjct: 8   MINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGEIYMIAAFVAVIAFTALSNAPLVVAIL 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L++  + +I+ A G  +   + +       +A LI +      L  +  +  G     V 
Sbjct: 68  LVLLFTMLITAAYGWTIERVAYRPLRGSFRLAPLISAIGMSIFLQNYVQLVQGARNKPVP 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                    V+            V        +++    L      ++  T++    R  
Sbjct: 128 P-------MVQGGFTIMDDGGFTVQLSYLQIMIVVTTVVLMVCFTQFINTTSLGRQQRAC 180

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             ++     L   +       F + +A   +AG         +      F   +   +  
Sbjct: 181 EQDKTMAALLGVNVDRTVSMTFVMGAALAAVAGVMVTLYYGVVDFY-LGFLAGLKAFTAA 239

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ SL        ++  +  +  G     +  +  F               L LV++
Sbjct: 240 VLGGIGSLPGAMLGGLLIGLIEAVWAGYFSSEWKDVAAFS-------------ILVLVLI 286

Query: 334 MRSHSLLRL 342
            R   LL  
Sbjct: 287 FRPQGLLGR 295


>gi|307301547|ref|ZP_07581307.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
 gi|306903604|gb|EFN34192.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
          Length = 333

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 54/325 (16%), Positives = 113/325 (34%), Gaps = 27/325 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
                ++L L            ++  +I    +    L +V G  G+ +L     +  GA
Sbjct: 22  LAGLAVILVLAGIGYLFFPNNLALLTRITAIALLVLSLDLVTGYCGVATLGHAALFGSGA 81

Query: 79  YSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           Y+  I    +      L++    +     G+  G+  L+  G    + ++ +  +F    
Sbjct: 82  YAAGIAAVHFGITDPLLMLAAGILGGALAGLACGVVILRAHGLPQLVLSIALIHLFHEFA 141

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            K  P T G  G+        +G              +F ++    Y   + +  +   +
Sbjct: 142 NKASPWTGGSDGLAGIAPDPLIGL------------FAFDLWGRTAYVFGVVLLAIVFVL 189

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  + R+      R IR++     ++  +   A L  + +S A  G+ GA  A S   + 
Sbjct: 190 LRLVVRSPFGMLCRGIREDPIRIRAMGASPTIALLKMYVISGAVAGVGGALNAVSTQVVG 249

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            D   F+ +   + +++LGG  SL      T + +   +L    N +++           
Sbjct: 250 LDSLSFTLSAESLVMLVLGGTGSLFGALTGTIVFMFFEDLVSAANPFHW----------- 298

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
               T++   L  V+L     L   
Sbjct: 299 ---LTMVGALLIAVVLFAPKGLYGT 320


>gi|288920305|ref|ZP_06414618.1| ABC transporter related protein [Frankia sp. EUN1f]
 gi|288348329|gb|EFC82593.1| ABC transporter related protein [Frankia sp. EUN1f]
          Length = 952

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 103/261 (39%), Gaps = 4/261 (1%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           +   IL Y + A  ++++ G  G LSL  +    +GA +        GL + L     A+
Sbjct: 347 LYTVILGYAICAASVTVLTGWAGQLSLGQMAFAGLGALTAA--SLHRGLRVPLGESTVAL 404

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
                 + +GL SL       A+    +      + +            +    ++    
Sbjct: 405 EPLPFPLAVGLASLVTALLAAAVGAGALRVRGLLLAVSTFAFGMAAEQYFYRREVFHDEG 464

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
           +  +  R        V  +   YYV+L +  +   ++  LRR+ +      +RDN     
Sbjct: 465 SRSASFRRDTVFGIDVTSQRAYYYVVLAVLAVVLVVVARLRRSGVGRTTVGVRDNPVTAA 524

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS--ENIIVISIVILGGMT 279
           +   +    KL +FAV+    G+ G+  A +   ++     F   +++ V+SIV++GG+ 
Sbjct: 525 AYTVSATRVKLRSFAVAGGIAGLGGSLLAGAVQTVTYTDRYFLTADSLAVVSIVVVGGLG 584

Query: 280 SLSKIAKATAILIGVVELCCG 300
           S+      +  ++G+  +  G
Sbjct: 585 SVYGPVLGSLWVVGLPAIFPG 605



 Score = 46.8 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/220 (11%), Positives = 71/220 (32%), Gaps = 8/220 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  L+  + A G+ +V  +  +++        +G+  + +L  R+ +  W  +P+
Sbjct: 9   LFDGVVNGLVIGLLAVGIVLVHRATRVVNFAVANIGLVGSALFALLVVRWNVPYWGALPI 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +     A G  + L  ++       +  L+ +     + +               D   +
Sbjct: 69  ALATGTAFGAAVDLAVVRRLFAAPRVIMLVATIGVAQLALTVV--------TAYPDLDDY 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                         P+  +        VL+ +  L+  +  +L RT +  + R   DN +
Sbjct: 121 PTARYPVPWNGTWTPTPELRITGAQLSVLVAVPLLALLLGWFLERTVLGRSVRAAADNPE 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
                  +      + +A +     +     +A    +  
Sbjct: 181 LARLQGISPKVVSTAVWAAAGLLGTVCLVLISAQNQSLEQ 220


>gi|33597166|ref|NP_884809.1| putative ABC transport protein, inner membrane component
           [Bordetella parapertussis 12822]
 gi|33601010|ref|NP_888570.1| putative ABC transport protein, inner membrane component
           [Bordetella bronchiseptica RB50]
 gi|33573593|emb|CAE37875.1| putative ABC transport protein, inner membrane component
           [Bordetella parapertussis]
 gi|33575445|emb|CAE32523.1| putative ABC transport protein, inner membrane component
           [Bordetella bronchiseptica RB50]
          Length = 309

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 97/305 (31%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A G ++V G +GL++        IGA +  ++ +            
Sbjct: 8   IINGLTLGSVYALVALGYTMVYGIIGLINFAHGDVVMIGAMAATMVAAALVGGDPSTSAF 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +G   ++     +        +A   +    +   +      +             
Sbjct: 68  AVLGAGL--LVSVPLCMAVGWTAERVAYRPLRRAPRLAALITAIGVSIILQNVAMMVWGR 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  ++    F        +    +++    +  +++L + +T +  A R    N++
Sbjct: 126 NYLNFPQVLTPAVFEIGGARMSMLQIAIVVIAALIMGALLLVVHKTRLGTAMRATAQNRE 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   I     +AF + SA   +AG         +S     F   +   +  +LGG+
Sbjct: 186 VAGLMGVNINTVISAAFLIGSALAAIAGMMVTTYYG-VSQYTMGFMLGLKAFTAAVLGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L  +  L  G         L      +        + L +V++ R   
Sbjct: 245 GNLVGAMAGGLLLGIIESLGSGYIGDLTGGFLG-----SHYQDVFAFVVLVMVLIFRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|325273633|ref|ZP_08139849.1| inner-membrane translocator [Pseudomonas sp. TJI-51]
 gi|324101237|gb|EGB98867.1| inner-membrane translocator [Pseudomonas sp. TJI-51]
          Length = 495

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 222 ITFGLLGVINMAHGEMLMLGAYSTYMVQVLVQRYAPGAIEFYPLIALPVAFAISAGVGMA 281

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         I +      +  +  + +         +
Sbjct: 282 LER--TVIRHLYGRPLETLLATWGISLILIQAIRLLFGAQNVEVSNPAWLSGGIQLLPNL 339

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++     +     L L RT +    R +  N+        +     + AF +
Sbjct: 340 VLPYNRLVIIGFALAVVLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVSTGRVDMLAFGL 399

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    +L
Sbjct: 400 GSGIAGLGGV--ALSQVGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSLWAAFGLGIANKL 457

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 458 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 492


>gi|171780213|ref|ZP_02921117.1| hypothetical protein STRINF_02001 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281561|gb|EDT46996.1| hypothetical protein STRINF_02001 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 294

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 104/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   IY + A G ++V G + L++      Y +GA+      S   ++ WL + V
Sbjct: 10  LVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFIGYYAISTLHMNFWLALIV 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   GM++   + +       IA LI +      L        G            
Sbjct: 70  TMVATAFIGMVIEFLAYRPLRHSTRIAALITAIGVSFFLEYGMVFLVGANTRS------- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    +    V        +L+    L  ++ L +++T +  A R +  +  
Sbjct: 123 ----FPQAIDIVSYKLGPVTVTNIQLLILVVSLVLMVALQLIVKKTKMGKAMRAVSVDSD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG       + I P M   +  I      +LGG+
Sbjct: 179 AAELMGINVNSTISFTFALGSALAGAAGVLIGLYYNSIEPLM-GMTPGIKAFVAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +  L                 + +     ++   L +++L+R   
Sbjct: 238 GIIPGAALGGFVIGILETL-------------SISVNLSSYRDAIVYAVLIIILLIRPAG 284

Query: 339 LLR 341
           +L 
Sbjct: 285 ILG 287


>gi|121595557|ref|YP_987453.1| inner-membrane translocator [Acidovorax sp. JS42]
 gi|222111778|ref|YP_002554042.1| inner-membrane translocator [Acidovorax ebreus TPSY]
 gi|120607637|gb|ABM43377.1| L-isoleucine ABC transporter membrane protein / L-valine ABC
           transporter membrane protein / L-leucine ABC transporter
           membrane protein [Acidovorax sp. JS42]
 gi|221731222|gb|ACM34042.1| inner-membrane translocator [Acidovorax ebreus TPSY]
          Length = 308

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 53/311 (17%), Positives = 105/311 (33%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G ++V G +G+++      Y IGAY  ++  S            
Sbjct: 12  LFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGDIYMIGAYIGLVTLSAVGVQSGLPVWA 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            I L++ V+  I+G  G ++   + K       +  LI +      L  W  +  G    
Sbjct: 72  IIALMLVVAVAITGVYGFVVEQVAYKPLRSSPRLVALISAIGMSIFLQNWVALGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   + + +   +RF       V        ++     L  ++ L+++ + +  A 
Sbjct: 129 ----RDMAVPSLIPGALRFGSEGGFEVYVPYSRILIIAVAVVLMIALTLYIQHSRMGRAS 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    +      L           F + +    + G   A +  +++P    F   I   
Sbjct: 185 RACSQDMHMANLLGIDTNRVISFTFILGAMLAAVGGVLIALAVGKLNPF-IGFIAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL              +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMLGGVILGVAETFAAAYISSEYKDIVAFG-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L+R   LL 
Sbjct: 291 ILLVRPTGLLG 301


>gi|297566882|ref|YP_003685854.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
 gi|296851331|gb|ADH64346.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
          Length = 320

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 97/303 (32%), Gaps = 10/303 (3%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW-LLIPVSAM 101
            +   +Y M A G ++V G L L++      + IGA + V +       I   L+ +   
Sbjct: 17  LLLGFVYAMIALGYTMVYGVLELINFAHSEIFMIGAVAGVEVFRYLVPVIPNALLLLLIA 76

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           +     +   +     R  Y  +           ++         +  + + + ++    
Sbjct: 77  LVIGAAISGTVAVWVERLAYRPLRKRGAVNRLVPLITAIGVSFVLQDLVRLIEAIWHNEF 136

Query: 162 TVRSLIRF---FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            +R          F    +  ++    +++    +   +   + RT +  A R +  +  
Sbjct: 137 FLRINSLPALEQSFSLLGIFIQLKSIILVVVSILMLLGLSYLVNRTKLGTAIRAVAQDMN 196

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           F +  A  G+AG  FA     ISP +  F   +   +  +LGG+
Sbjct: 197 TAALMGINPDQIISRTFLIGGALAGVAGVLFAVQYTTISPYV-GFLPGLKAFTAAVLGGI 255

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L  +  L         N               +  + L L++L R   
Sbjct: 256 GNIPGAMVGGLVLGQLETLAGTYMPTLTNGNFG-----TEYKDVIAFLILILLLLFRPQG 310

Query: 339 LLR 341
           LL 
Sbjct: 311 LLG 313


>gi|222109394|ref|YP_002551658.1| inner-membrane translocator [Acidovorax ebreus TPSY]
 gi|221728838|gb|ACM31658.1| inner-membrane translocator [Acidovorax ebreus TPSY]
          Length = 635

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 54/305 (17%), Positives = 113/305 (37%), Gaps = 33/305 (10%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y   +   I I  +FA  L  ++G  GL S      + +GAY   +L       + + +
Sbjct: 344 SYATVLLTDIAIAALFAASLHCILGPGGLHSFGHAAYFGLGAYGAALLVRWLDWPMGMAL 403

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +  +++ A  ++ G   ++  G  L + TL  ++I   I  +W   T G  GI      
Sbjct: 404 LLGPLVAAAGALVYGWFCVRLSGVSLTMLTLAFAQITWAIAYQWDGFTGGSNGITGVWPP 463

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
            +                         Y+++L +      ++  +    +  A R  RD+
Sbjct: 464 QW------------------AAQGAGFYWLVLALAVAGIYLLRRMLFAPLGWALRAARDS 505

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                ++   +   + +AF V+    G+AGA +  S+  ++PD    S ++  + +V+LG
Sbjct: 506 ALRADAIGIDVRGVQWAAFVVAGLLAGLAGALYVFSKGSVAPDALGVSRSVDGLVMVLLG 565

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM  L+       +   + +       Y+                 L+   + L++L+  
Sbjct: 566 GMQQLAGPVVGAGVFTWLHDTVARSTDYWRA---------------LLGGIMLLLVLLFP 610

Query: 337 HSLLR 341
             +  
Sbjct: 611 QGISG 615



 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 96/306 (31%), Gaps = 17/306 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL--SIWLLI 96
           + +         + A GLS++ G + +++      Y +G Y    L  R G     W  +
Sbjct: 10  LLNGLAGASTLFLVAAGLSLIFGVMRIVNFAHGSFYMLGLYLAYALVERLGDALGFWPAL 69

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ +  G  G  + +  L+       +  L+ +     ++        G   ++     
Sbjct: 70  LLAPLAVGLLGAAVEVLLLRRIYRAPELLQLLATFALVLVIKDAALWLWGPEELFGPRAP 129

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G                  +  +  +++     +   + L L RT      R    +
Sbjct: 130 GLEGA----------VDLLGRRFPAYDLFLIAVGPLVLVLLTLLLTRTRWGTLVRAATQD 179

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +L     +   S FA+ +   G+ GA                        +V++G
Sbjct: 180 REMVGALGVNQAWLFTSVFALGALLAGLGGALQLPREPA--SLELDMLTIGAAFVVVVVG 237

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM SL     A  ++    EL     +     +   + +F      +  + +  V++ R 
Sbjct: 238 GMGSLPGAFVAALVIA---ELKAVCIWLGVVEVAGVEVAFPRLTLVVEFLVMAAVLIWRP 294

Query: 337 HSLLRL 342
              +  
Sbjct: 295 WGFMGR 300


>gi|94313402|ref|YP_586611.1| branched-chain amino acid inner-membrane translocator [Cupriavidus
           metallidurans CH34]
 gi|93357254|gb|ABF11342.1| Branched-chain amino acid inner-membrane translocator
           (inner-membrane translocator) [Cupriavidus metallidurans
           CH34]
          Length = 332

 Score = 80.7 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 58/303 (19%), Positives = 120/303 (39%), Gaps = 25/303 (8%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-YGLSIWLLIPVS 99
           ++  ++LIY M A   ++++G  GLLS    I + +G+Y+  +  +R  GL + + +  +
Sbjct: 32  TLATEVLIYGMAAMACNLLLGYTGLLSFGQGIFFGLGSYAVGLALTRAGGLPMPVALLGA 91

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +I  A   ++G  S++ RG Y  + TL  +++F  +      IT G  G+    R    
Sbjct: 92  VVIGAATAALVGWFSIRQRGTYFVMLTLAFAQMFYFLAYTAPGITGGDNGLLDIPRPP-- 149

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                  I         +      Y  +  +  +  +++L +  + +      IRDN++ 
Sbjct: 150 -------ISIGGHALIDLTSSWGFYGFVAVLFLIVFALVLRVTESVLGRTLLAIRDNEER 202

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             ++       KL AF +S A  G+AGA  A            +  + +++ + ++GG +
Sbjct: 203 ALAVGYNTRAFKLLAFVISGAVTGLAGALHAMLTGIAPLANIDYHASEMILIMTVIGGTS 262

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           ++       A  + + +    +   +                 L+   L  V L     L
Sbjct: 263 NIFASVLGAAFYVLLADWLSTLWPRW---------------LMLLGFLLIAVSLFMQRGL 307

Query: 340 LRL 342
             L
Sbjct: 308 WGL 310


>gi|326316890|ref|YP_004234562.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323373726|gb|ADX45995.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 328

 Score = 80.7 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 59/278 (21%), Positives = 122/278 (43%), Gaps = 14/278 (5%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
             +     + +   +  +IL++ + A  L++++G  G++S        +GAY+  IL   
Sbjct: 32  PTIAQALDEGFYIGVASRILVFALAATSLNLILGFGGMVSFGHAAFVGVGAYAVGILMQE 91

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
              S W+  P +        +++G  SL+ +G Y  + TL  +++   +++  K    G+
Sbjct: 92  GIASAWIAWPAAIAAGALFALVIGWVSLRTQGVYFIMITLAFAQMLFYLMVSLKA-YGGE 150

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
            G+ +A R                 P   +  +   YY +L +C L    +  L      
Sbjct: 151 DGLSLASRSQVG-------------PWLDLADDARFYYCVLAICVLVFVGLARLLNARFG 197

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
           +A + IR+N+    +L   +   KL+AF ++ A  G+AGA  A     +SP   ++S++ 
Sbjct: 198 HALQGIRENETRMAALGFAVYRTKLAAFTLAGAIAGLAGALLANQAGFVSPAALQWSQSG 257

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           +++ +VILGG+  L          + + E+      ++
Sbjct: 258 MLMVMVILGGVGRLYGGFVGAVAFLLIEEVLAAHTMHW 295


>gi|293606220|ref|ZP_06688583.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292815367|gb|EFF74485.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 309

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 94/305 (30%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +GL++        IGA +   +          +   
Sbjct: 8   LINGVTLGSVYALVALGYTMVYGIIGLINFAHGDVVMIGAMAATTIAISLVGGDPGV--S 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G   ++     +        +A   +    +   +      +             
Sbjct: 66  AFVVLGVGLLVSVPLCMAVGWTAERVAYRPLRRAPRLAALITAIGVSIILQNVAMMAWGR 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  ++    F  +          +++    +   ++  + +T +  A R    N++
Sbjct: 126 NYLNFPQVLSPRVFEFAGARMSTLQIAIVVIAALIMGGLLAIVHKTRLGTAMRATAQNRE 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   I     +AF + SA   +AG   A     +S     F   +   +  +LGG+
Sbjct: 186 VAGLMGVNINTVISAAFLIGSALAAVAGMMVATYYG-VSQYTMGFMLGLKAFTAAVLGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L  +  L  G         L      +          L LV++ R   
Sbjct: 245 GSMVGAMVGGLLLGVIESLGAGYIGDITGGFLG-----SHYQDVFAFFVLVLVLIFRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|17230028|ref|NP_486576.1| permease protein of branched-chain amino acid ABC transporter
           [Nostoc sp. PCC 7120]
 gi|17131628|dbj|BAB74235.1| permease protein of branched-chain amino acid ABC transporter
           [Nostoc sp. PCC 7120]
          Length = 316

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 48/319 (15%), Positives = 103/319 (32%), Gaps = 31/319 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY--------------VIL 84
           + +      +Y +FA G ++V   LG+++L     + +GAY                   
Sbjct: 10  LLNGLSIGSVYAIFALGYTLVYSILGIINLAHGAIFTLGAYFTYALMGGTFGFNGLLANA 69

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                L   + + + + ++G  G+ M   + +      +   L +       ++    I 
Sbjct: 70  TLPIQLPFAMALIMGSSLAGLVGVAMERIAFQPLRKKGSDTLLTVVSSLGVAVVIVNLIQ 129

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                          G         F      +        +      + A +  ++ RT
Sbjct: 130 YLVGAESYTFPANTFGN--LPPAFNFGTLEKPIPIRSVQVVIFTVSVVIVAILTYFINRT 187

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
               A + I ++      L        +  F +SS   G+AG   A+S   I+   F   
Sbjct: 188 KYGKAIQAIAEDATTASLLGINSDRFIVLTFFISSFLAGLAGTLVASSV-SIAGPYFGIG 246

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
             +  +++++LGG+ S+        ++  V  L                  ++     + 
Sbjct: 247 FGLRGLAVIVLGGLGSIPGAVLGGLLIGVVEALV--------------PSDYSGYKDAVA 292

Query: 325 VIALFLVILMRSHSLLRLR 343
              LF+++L+R   LL  R
Sbjct: 293 FGILFIMLLVRPQGLLGRR 311


>gi|308233572|ref|ZP_07664309.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Atopobium vaginae DSM 15829]
 gi|328943975|ref|ZP_08241440.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Atopobium vaginae DSM
           15829]
 gi|327491944|gb|EGF23718.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Atopobium vaginae DSM
           15829]
          Length = 290

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 98/303 (32%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A G ++V G + LL+        +GAY   +   + G+     I  
Sbjct: 6   ILNGLQVGSIYALVALGYTMVYGIILLLNFAHGDIIMVGAYISWLCLVQLGIGPIPAIIA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G+++   +     +   ++ LI +      L     +  G     + +    
Sbjct: 66  TIIVCTLLGIVIEKLAYAPLRNAPRLSLLITAIGVSYFLENCAQLIFGADAKVLPNFFEV 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +               +         ++      A + L +++T +  A R + ++  
Sbjct: 126 SSSEFMG-----------LPISTVAVITIVVTGISCAVLTLLVKKTKLGAAMRAVSEDMG 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+     G+    ++ +  + SP M             +LGG+
Sbjct: 175 AARLMGINVNTVISFTFALGCVLAGIGSVLYSMAYAQASPTM-GVMLGTKAFVAAVLGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++     L        +                ++ + L +V++++   
Sbjct: 234 GSIPGAVIGGLVVGFAEVLVSACGLSVWKDA-------------IVFLLLIIVLVVKPTG 280

Query: 339 LLR 341
           +L 
Sbjct: 281 ILG 283


>gi|319779522|ref|YP_004130435.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Taylorella equigenitalis MCE9]
 gi|317109546|gb|ADU92292.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Taylorella equigenitalis MCE9]
          Length = 308

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 106/311 (34%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL--------GSRYGL 90
           + +      IY + A G ++V G +G+++      Y IGAY  +I              +
Sbjct: 12  LFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLITLAVLGVDGSIPVPV 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            I  ++ VS +++G  G  +   + +   +   + +LI +      L  W  +  G    
Sbjct: 72  LIGCMLLVSVIVTGVYGYAVERVAYRPLRNSPRLISLISAIAMSIFLQNWVALGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               +   +   +     F       ++       ++  +  L  ++ L+++++ +  A 
Sbjct: 129 ----KDVAVPNILPGSFVFTFSNDFTIVISYSRILIIAVVFVLMVALTLFIKKSRMGRAS 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    + +    L           F + +    + G   A +  +++     F   I   
Sbjct: 185 RACSQDIQMANMLGIDTNKVISVIFILGAVLAAVGGVLIAITIGKLN-PFIGFIAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        I+     +        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSVPGAILGGLIIGVTETMAAAYIASEYKDIVAFG-------------LLVL 290

Query: 331 VILMRSHSLLR 341
           ++L +   LL 
Sbjct: 291 ILLFKPSGLLG 301


>gi|303233425|ref|ZP_07320094.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Atopobium vaginae PB189-T1-4]
 gi|302480554|gb|EFL43645.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Atopobium vaginae PB189-T1-4]
          Length = 290

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 101/304 (33%), Gaps = 25/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +   Q  IY + A G ++V G + LL+         GAY   I+  + GL +++ + +
Sbjct: 6   IINGLQQGSIYALVALGYTMVYGIIQLLNFAHGDIIMAGAYVCWIIMVQLGLPVYIAVVL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+++   +         ++ LI +      L     +  G            
Sbjct: 66  APLACMVLGILIDKIAYAPLRSSSRLSLLITAIGVSYFLENAVQLIFGADSKV------- 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +  +I       +     +     ++       ++ L +++T +  A R + ++ +
Sbjct: 119 ----LGRMIDTNTIDIAGFPVSVVALITIVLTALGCVALTLLVQKTKLGCAMRAVSEDMQ 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S   G+    +  +  +  P M             +LGG+
Sbjct: 175 AAQLMGVNVNTIISVTFALGSLLAGVGSVLYCMAYTQAYPTM-GVMLGTKAFCAAVLGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++     +   +    +                ++ + L  +++ +   
Sbjct: 234 GSIPGAVLGGFVVGFAEVIVSALGLSLWKDA-------------VVFLLLIAILVFKPSG 280

Query: 339 LLRL 342
           +L  
Sbjct: 281 ILGT 284


>gi|253998411|ref|YP_003050474.1| urea ABC transporter permease UrtC [Methylovorus sp. SIP3-4]
 gi|313200486|ref|YP_004039144.1| urea ABC transporter permease urtc [Methylovorus sp. MP688]
 gi|253985090|gb|ACT49947.1| urea ABC transporter, permease protein UrtC [Methylovorus sp.
           SIP3-4]
 gi|312439802|gb|ADQ83908.1| urea ABC transporter, permease protein UrtC [Methylovorus sp.
           MP688]
          Length = 388

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/328 (13%), Positives = 92/328 (28%), Gaps = 36/328 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             +  ++  + L Y   A  L ++ G+ G+LSL   + + +G Y   +            
Sbjct: 34  DIFRLNLVGKYLTYAFVALSLVLLWGNGGILSLGQGMFFGLGGYCMAMFLKLEASDPIST 93

Query: 96  IPVSAMISGACGMIMG-----LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              +                      F+     I  +++       +I +        G+
Sbjct: 94  KIQTTPGIPDFMDWNQLTALPWFWEPFKSLPFTILAILIVPTIFAYIIGFAMFKRRVGGV 153

Query: 151 YVA-----------------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           Y A                          +  L     +       +  +YYV   + F 
Sbjct: 154 YFAIITQAIALILSILIVGQQGYTGGVNGITDLKTMLGWDIRTDSAKYILYYVNAILLFG 213

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              +  ++  +        +RD ++        +   K+  F V++    + GA F    
Sbjct: 214 CIFLSRYILTSKFGMLLLAMRDKEERVRFSGYDVSDFKIFTFCVAAMISAIGGAMFTLQV 273

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             +SP       +I ++    +GG  SL      T ++     +              F 
Sbjct: 274 GFMSPSFVGIVPSIEMVIFAAVGGRMSLIGAVYGTLLVNYGKTV--------------FS 319

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
            ++      LM      V++     L  
Sbjct: 320 ETYPELWLFLMGGLFIAVVMFFPDGLAG 347


>gi|159046266|ref|YP_001541938.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12]
 gi|157914025|gb|ABV95457.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12]
          Length = 342

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 61/336 (18%), Positives = 127/336 (37%), Gaps = 27/336 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +   A++  + + +   A     +   +  + LI    A  + I++G  GLLSL   + +
Sbjct: 14  IFFAALLGIVAIGVVFAAATGDVFYLRLATEALILGGLALSVDILLGFGGLLSLGQALYF 73

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IGAY   +   R   S WL +  + + S   G++ GL + + RG Y A+ T  M+++  
Sbjct: 74  GIGAYVSAL-VLRDVPSFWLALGTATLASLVAGIVGGLIANRVRGVYFALITFGMAQVVA 132

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+   + +                   V  L       +      +  + + L +  + 
Sbjct: 133 KIVYNTREL-----------GASDGLIGVPVLEIPLGVATISAGDPVAFFLLTLAVLTVL 181

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              + +L  T         + N+K    L  +  + ++ ++ V++   G++GA +   R 
Sbjct: 182 YGAVAYLLTTPFGRLVIANKANEKRVPFLGYSTWWPRMVSYVVAALVAGISGALYPMLRG 241

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            +SP++  F+ +   + +VILGG+ +L+       IL  +  +      +          
Sbjct: 242 FVSPELMFFATSGNAVIMVILGGVGTLAGALYGAMILTFLKSVVGSYTEH---------- 291

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                H   + +     IL     L+ L  P     
Sbjct: 292 -----HLIAIGLIFICAILFLPKGLIGLIKPRLETR 322


>gi|17546758|ref|NP_520160.1| ABC transporter permease [Ralstonia solanacearum GMI1000]
 gi|17429057|emb|CAD15741.1| probable permease transporter transmembrane protein [Ralstonia
           solanacearum GMI1000]
          Length = 396

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 47/349 (13%), Positives = 96/349 (27%), Gaps = 32/349 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L  + V    L            Y  ++  +I+ Y + A  L +V G  G+LSL   
Sbjct: 28  AALLVCVGVPVCALAVPAGHPLHLSAYALTLVGKIMCYALAALALDLVWGYCGILSLGHG 87

Query: 72  IAYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLP 113
           + +A+G Y+  +                                          +++ L 
Sbjct: 88  LFFALGGYAMGMYLMRAIGRDGVYQSDLPDFMVFLDWKELPWFWHGTGHFAWAALLVVLV 147

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
                  +   A     +     +I            +  +  +          R   +P
Sbjct: 148 PGVLAWLFGFFAFRSRVKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGYP 207

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
            + V     ++        L+      +  +        IRD +        + +  KL 
Sbjct: 208 IAAVSTRTVLFVATFIALVLAFIACRAIVTSKFGRVVTAIRDAEARVMFSGYSPLGYKLF 267

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            +  S+   G+AGA +      I+P       +I +   V +GG  +L        ++ G
Sbjct: 268 VWTFSAVLCGIAGALYVPQVGIINPSEMSPGNSIEMAVWVAVGGRGTLVGPIVGAFLVNG 327

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              +                         ++     LV L   + +L L
Sbjct: 328 AKTVLTAW--------------VPEYWLFVLGAVFVLVTLFLPNGVLGL 362


>gi|328952594|ref|YP_004369928.1| ABC-type transporter, integral membrane subunit [Desulfobacca
           acetoxidans DSM 11109]
 gi|328452918|gb|AEB08747.1| ABC-type transporter, integral membrane subunit [Desulfobacca
           acetoxidans DSM 11109]
          Length = 339

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 59/336 (17%), Positives = 105/336 (31%), Gaps = 23/336 (6%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           ++     ++ +L     +L F              +      Y   A   +I     GLL
Sbjct: 17  KVMSRHIVVKILISAAVMLFFGGPLFLPGADLYLLVFGLACFYATLALAWNI-FALSGLL 75

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           SL     + +GAY  V+L +      +  I     +    G +  L   + RG Y A+A+
Sbjct: 76  SLGHAAFFGLGAYGAVLLENWGHWPTYPAIMAGGALGMVYGCLWSLAFQRLRGAYFALAS 135

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + ++  W+ +T+G  GI    RL          +                Y  
Sbjct: 136 LAAMEIPRVVIDNWETLTSGSLGIVGISRL--------PSLSIGSLVIPVGDNLQSQYCF 187

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           L  +      +     R+      R IR +++A   L   +   +     +SS   G+ G
Sbjct: 188 LFFLMAAVGLLHWRAMRSKWGWGLRAIRGDEEAAEVLGVNVFGYRCLTLCLSSYITGVCG 247

Query: 247 AFFAASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
             +A     I P M F        + + + GG  ++         L  + +L        
Sbjct: 248 GVYAHLVGLIEPAMVFNLQLAAFPLVLSLFGGRYAVLGPIIGALTLYPLDQLV------- 300

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                         H  +  + + L I      L  
Sbjct: 301 ------LQPWLPQGHAAIYGLVIILTIFFFPRGLAS 330


>gi|312135194|ref|YP_004002532.1| inner-membrane translocator [Caldicellulosiruptor owensensis OL]
 gi|311775245|gb|ADQ04732.1| inner-membrane translocator [Caldicellulosiruptor owensensis OL]
          Length = 294

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 92/289 (31%), Gaps = 10/289 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + + G ++V G + L++      + +GAY   +  +   L +   + +
Sbjct: 8   LINGITLGSIYALISLGYTMVYGIIKLINFAHGDIFMVGAYIAFLSVTYLKLGLIPSLLI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +     G+++   + K   +   IA LI +     +L     I  G         +  
Sbjct: 68  SMIFCSVLGILIEKLAYKPLRNSPRIAALITAIGVSLLLENLMQIIMGADSRVFPRLVAE 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             ++      Y+L+    L   +   +++T I  A R +  +  
Sbjct: 128 KNYH---------LFQGRIVVNNKQIYLLVITVLLMIILNFIVKKTKIGKAMRAVSQDMD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA    AG       + I+P M      +      + GG+
Sbjct: 179 AARLMGINVDTTISYTFAIGSALAAAAGVLVGLYYNTINPLM-GVLPGLKAFIAAVFGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +         L  +  L  G     +   + F     +       + 
Sbjct: 238 GIIPGAMLGGFSLGIIETLVSGYGSSMYKDAVAFALLILILIIKPSGLL 286


>gi|296162347|ref|ZP_06845140.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295887380|gb|EFG67205.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 356

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 92/307 (29%), Gaps = 2/307 (0%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L                    L++   A GL+ + G  G+LS      + +  Y+Y I  
Sbjct: 22  LLALCLPLVVDANTSGNLAYCLLWAFSALGLAAMWGYGGILSFGQTAFFGLSGYTYGIFT 81

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI-MSEIFQNILIKWKPIT 144
             YG + +              ++  L         +    +  ++     +L  +   T
Sbjct: 82  LNYGDTWFESWLGLGAGIVVSIVVAALIGYMIFYGRIKGVFIGIVTLSVTLVLETFMSQT 141

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY-EIFMYYVLLGMCFLSASIILWLRR 203
            G        RL               +P   +    +  YY++L +     +I+  L  
Sbjct: 142 AGPQWAIGEARLNGYNGMGGMPQLTIPWPGGPLTLENVSFYYLVLLLLIAVYAIMRKLLD 201

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
                    IR+N +    L   I   +L  F +     G++GA +      I+P     
Sbjct: 202 GTFGLTLIAIRENPQRAEMLGVDIRRHQLMVFVLGCTLGGLSGALYTIWGSYITPSTMGL 261

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +   + +  V   G  S+      TA+L+ + +        Y   LL       +     
Sbjct: 262 TAAAMPVIWVATSGRKSIGGTIIGTALLVWLSQNLAVYGSQYALILLGAILLIVVLAAPE 321

Query: 324 MVIALFL 330
            ++    
Sbjct: 322 GLLPFVA 328


>gi|220904747|ref|YP_002480059.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869046|gb|ACL49381.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 302

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 92/299 (30%), Gaps = 17/299 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
             +  IY + A G ++V G + L++      Y +GA++ +++    G+  +    +  + 
Sbjct: 14  LTRGSIYALIALGYTLVYGIIELINFAHGEVYMLGAFTALLVAGVLGVYGFPAGGILVVA 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           + A  +                          + LI    ++       +  +       
Sbjct: 74  ALAAIVWCAAYGYTLEKVAYKPLRGA---PRLSPLISAIGMSIFLQNYVLLAQTSDFVPF 130

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
              L           +     + +L        S+ L++R T +  A R    N+K    
Sbjct: 131 PSLLPEMDFLEHIGYVMGPSDFLILAVSTIAMVSLSLFIRYTRMGKAMRATAQNRKMALL 190

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L           F + S    + G   A+   +++     F   +   +  +LGG+ S+ 
Sbjct: 191 LGINADRIISLTFIIGSGLAALGGVLIASHMGQVNF-GIGFLAGLKAFTAAVLGGIGSIP 249

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  +L        G     +  +L F               L L+++ R   +L 
Sbjct: 250 GAMVGGLVLGLAESFTTGYFSGNYEDMLAF-------------AILILILIFRPDGILG 295


>gi|312127555|ref|YP_003992429.1| inner-membrane translocator [Caldicellulosiruptor hydrothermalis
           108]
 gi|311777574|gb|ADQ07060.1| inner-membrane translocator [Caldicellulosiruptor hydrothermalis
           108]
          Length = 294

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 92/289 (31%), Gaps = 10/289 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + + G ++V G + L++      + +GAY   +  +   L +   + V
Sbjct: 8   LINGITLGSVYALISLGYTMVYGIIKLINFAHGDIFMVGAYIAYLSVTYLKLGLIPSLIV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +     GM++   + K   +   I+ LI +     +L     I  G         +  
Sbjct: 68  SMVFCSILGMLIEKFAYKPLRNSPRISALITAIGVSLLLENLMQIIMGADSRVFPRLVAE 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             ++      Y+L+    L   +   +++T I  A R +  +  
Sbjct: 128 KNYH---------LFQDRIVVNNKQIYLLIITVLLMIILNFVVKKTKIGKAMRAVSQDMD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA    AG       + I+P M      +      + GG+
Sbjct: 179 AARLMGINVDTTISYTFAIGSALAAAAGVLVGLYYNTINPLM-GVLPGLKAFIAAVFGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +         L  +  L  G     +   + F     +       + 
Sbjct: 238 GIIPGAMLGGFSLGIIETLVSGYGSSMYKDAVAFALLILILIIKPSGLL 286


>gi|221369306|ref|YP_002520402.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131]
 gi|221162358|gb|ACM03329.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131]
          Length = 332

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 59/310 (19%), Positives = 118/310 (38%), Gaps = 29/310 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS      +   AY        +G      I +   
Sbjct: 45  FLMKLLCFALFAAAFNLLLGYTGLLSFGHATFFGGSAYFTAHAVKVWGWPPEFGILLGVA 104

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            + A G++MG+ +++ +G Y A+ TL +S++F    ++                      
Sbjct: 105 GAAALGLLMGVIAIRRQGIYFAMITLALSQMFFFFCLQAAFTHG--------------ED 150

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++S+ R   F    +     MY+ +LG   L    I     +      + IR+N+    
Sbjct: 151 GIQSVPRGHLFGVIDLSNATNMYFFVLGTFTLGMLAIWRFVNSPFGMILKAIRENEPRAI 210

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL  ++   KL AF +S+A  G+AG   A      +     +  +  VI + +LGG+ +L
Sbjct: 211 SLGYSVAEYKLGAFVMSAALAGLAGGVKALVFQFATLTDVGWQMSGEVILMTLLGGIGTL 270

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                 +A+++ +        F                 T +  +     +L+    ++ 
Sbjct: 271 VGPVVGSALVVTLQNYLATSQFPV---------------TIITGLVFMACVLLFRRGIVG 315

Query: 342 LRTPSNFLER 351
               S    R
Sbjct: 316 EFYASRLGRR 325


>gi|291518119|emb|CBK73340.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           (TC 3.A.1.4.-) [Butyrivibrio fibrisolvens 16/4]
          Length = 293

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 106/305 (34%), Gaps = 23/305 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      +Y + A G ++V G   +L+        IGAY   +  S  G+   + I
Sbjct: 5   TYLINGLSLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGAYVVFMCMSNSGMPAVVSI 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +S +   A GMI+   + K       +A LI +      L     +  G   +     +
Sbjct: 65  VISIVCCTALGMIIEKIAYKPLRKATNLAVLITAIGVSYFLQNMALMIFGSNPVSFTSVV 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
            + G ++             +         ++    +  +++ +++ T    A R + ++
Sbjct: 125 KWQGISLAG---------GALKITGNAIITIITCVVIMIALMWFVKNTKPGQAMRAVSED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++A   +   +       FA+ S    +AGA   +S   ++P        I   +  + G
Sbjct: 176 KEAAILMGINVNATISLTFAIGSGLAAIAGALLCSSYPSLTPYT-GSMPGIKAFTAAVFG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+                  G        +L      +     ++   L +V+L++ 
Sbjct: 235 GIGSI-------------PGALIGGLLLGIIEILAKAYISSQLADAIVFAVLIIVLLVKP 281

Query: 337 HSLLR 341
             +L 
Sbjct: 282 TGILG 286


>gi|332558744|ref|ZP_08413066.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides WS8N]
 gi|332276456|gb|EGJ21771.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides WS8N]
          Length = 410

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 52/353 (14%), Positives = 99/353 (28%), Gaps = 36/353 (10%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L     G             + L   + A  + +V G  G+LSL  +  +A+G Y   + 
Sbjct: 28  LASHAYGTAFLSTSFVKTLGKTLCLCLVALAMDLVWGYAGILSLGHMAFFALGGYMIGMW 87

Query: 85  GSRYGLSIWLL-------------------------------IPVSAMISGACGMIMGLP 113
                    ++                               +P     + +  + + L 
Sbjct: 88  LMYARTEDIVVQALSNAPLPATPQEISDGVASQIFGVVGGAELPAVWAFAHSLPLQLALV 147

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
            L      L    L        + +         A      +          L      P
Sbjct: 148 VLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALALHLFQNDAGLRGNNGLSGLQNIP 207

Query: 174 SSFVI----YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
               +      ++ ++   G   L   +  W+      +  R IRD+++    L  ++  
Sbjct: 208 GLVQVSQDRLSVWFFWASAGALALGYLLAAWIVSGKFGSVLRAIRDDEQRVRFLGYSVEG 267

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            KL  F +++    +AGA +      I+P       +I +   V +GG   L       A
Sbjct: 268 YKLFIFTLTAVIAAIAGALYYPQAGIINPAELAPIASIYLAVWVAIGGRGRLYGAVIGAA 327

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +  +     G       SL      +      L+ +A  LV L     +  L
Sbjct: 328 FVSLLSTWFTG-GRAPVLSLGFVTIQWVDWWQILLGLAFVLVTLFAPQGIGGL 379


>gi|126667012|ref|ZP_01737987.1| ABC-type transport system permease protein II (probable substrates
           branched-chain/neutral amino acids) 2 [Marinobacter sp.
           ELB17]
 gi|126628418|gb|EAZ99040.1| ABC-type transport system permease protein II (probable substrates
           branched-chain/neutral amino acids) 2 [Marinobacter sp.
           ELB17]
          Length = 325

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 67/333 (20%), Positives = 124/333 (37%), Gaps = 36/333 (10%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
              L  LA +   LL L +       Y   +    L++   A   +IV G  G +S    
Sbjct: 9   RGYLFRLAAIAVCLLALAVVPAFVDPYSLRIVTGALMWAGLACAWNIVGGYAGYISFGHS 68

Query: 72  IAYAIGAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
             + IGAY+  IL        +L  +  S +++     I+G P+++ RG Y AIAT   +
Sbjct: 69  AFFGIGAYTTAILMQSGIGMPFLATLLPSVVVAMIVAAIIGGPTMRLRGAYFAIATWAFA 128

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           E+   +      +T G AG+ +   L                         F Y +L   
Sbjct: 129 EMLIQLATIL-DVTGGTAGLSLPAYLNEF---------------------FFYYTMLAAA 166

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 +   +  T      + +RD++ A  ++       K+ AFA+S+A   + G+ FA
Sbjct: 167 AASFLGVWYLIEYTRFGFRLKALRDHEPAAEAMGIRTNLVKVQAFALSAAITALFGSVFA 226

Query: 251 ASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                I P           ++ +V+LGG+ ++   A    +L               N  
Sbjct: 227 YWTTYIDPHSVLGPDITDQMVVMVLLGGLGTIWGPALGAVVLWM------------TNRY 274

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +       + +  ++ + + +V+L   + L+ L
Sbjct: 275 IWSTFGDTVVYLPILGLIIAMVVLFLPNGLISL 307


>gi|330470239|ref|YP_004407982.1| inner-membrane translocator [Verrucosispora maris AB-18-032]
 gi|328813210|gb|AEB47382.1| inner-membrane translocator [Verrucosispora maris AB-18-032]
          Length = 372

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 50/343 (14%), Positives = 113/343 (32%), Gaps = 20/343 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLF-------LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
            ++    L L+ +   L+L               +      +    L++   A G  ++ 
Sbjct: 23  WSRLRPFLPLVVLAVALILPYSTLHLPGVFEGALNSPGTLQLLAVCLVFGGLAAGYDLLF 82

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G+LS    + +A G Y   IL +R GL +W   P++ +       ++G  +L+  G 
Sbjct: 83  GRTGMLSFGHALYFAAGVYGTDILITRVGLPLWQAAPLAIVGGIILAGLVGAVALRTVGI 142

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
             A+ TL  +++   ++ +                L      +   +         V   
Sbjct: 143 AFAMVTLAFAQVGAILVAR------------DFGGLTGGEEGLPLDVTGVPSGLVGVANT 190

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           + +Y++ L    +   ++  +  +        +RD+++    L       KL AF ++  
Sbjct: 191 VNLYWLALAYLVVVVFVVHRVSNSPTGRVLAGVRDDERRIGVLGLDPYRFKLVAFTLAGG 250

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
                G  +       SP +      + ++ +V+LGG  +         + + +      
Sbjct: 251 LAAAGGVVYCLIVGGASPHITSSELTLSLLVMVVLGGPGTRWGPVLGGILYMYLDHRLIS 310

Query: 301 MNFYYFNSLLKFDCSFNMRH-TTLMVIALFLVILMRSHSLLRL 342
           +        L    S  +     ++     L +      L  L
Sbjct: 311 VGSSGAIDALPAFLSRPLSQPLFVLGTVFILAVYFFPGGLASL 353


>gi|302059925|ref|ZP_07251466.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato K40]
          Length = 331

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 90/288 (31%), Gaps = 13/288 (4%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
           + +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  +        
Sbjct: 43  SFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAG 102

Query: 87  -----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                      W  +P     +      M L  L      L           + +     
Sbjct: 103 DGLPAFMTFLSWTELPWYWAGTDNFLWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIM 162

Query: 142 PITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                 AG+ +  R    +       +      F  +       ++   + +   S  I 
Sbjct: 163 TQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSITSQGTRATLFLATVVLLVASLYIG 222

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L ++        +RD +             KL  + +S+   G+AGA +      I+P
Sbjct: 223 WKLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP 282

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                + +I     V LGG  +L        ++ G+          Y+
Sbjct: 283 SEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSWFTVAFPEYW 330


>gi|254450035|ref|ZP_05063472.1| permease protein, haat family [Octadecabacter antarcticus 238]
 gi|198264441|gb|EDY88711.1| permease protein, haat family [Octadecabacter antarcticus 238]
          Length = 315

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 94/322 (29%), Gaps = 15/322 (4%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
             G      Y+    +   IY + A G+++  G L   +         GAY    + +  
Sbjct: 4   AFGFEFVNFYLIPGLVLGCIYALGAIGITLTFGILRFANFAHGEIMMSGAYLTWTVMAIA 63

Query: 89  GL-----SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           G         + +  + ++     +       K       I  ++ S     I+     +
Sbjct: 64  GYAGLTLHPLVAMVPATLLVILLFLGTDKFFYKPFRKADTIKVVMASFGMMLIIRSAVQV 123

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G   +     +      +  L          +I      ++  G   +  ++   L R
Sbjct: 124 IWGPNQLTFVRGIAKPNPVLSDLSGDIGMM---LIIPNKHLFIFAGTVIIVIALSYLLNR 180

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T I  A R + D+          +     + + V       AG F       +   M  F
Sbjct: 181 TRIGKAMRAVSDSPDLAHVTGIDVDKVIRATWIVGGICATAAGVFLVMDVQMLETTM-GF 239

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
              + + +  ILGG+           ++    EL        +  +           T +
Sbjct: 240 RMLLPMFAAAILGGIGKPYGAVFGGLVIGLAEEL------SAYPWIGDTPLLSPGYKTGV 293

Query: 324 MVIALFLVILMRSHSLLRLRTP 345
               + +++++R   L + R+ 
Sbjct: 294 AFAIMVIMLIVRPQGLFKGRSF 315


>gi|258543391|ref|YP_003188824.1| urea short-chain amide or branched-chain amino acid transporter
           permease [Acetobacter pasteurianus IFO 3283-01]
 gi|256634469|dbj|BAI00445.1| urea short-chain amide or branched-chain amino acid transporter
           permease protein [Acetobacter pasteurianus IFO 3283-01]
 gi|256637527|dbj|BAI03496.1| urea short-chain amide or branched-chain amino acid transporter
           permease protein [Acetobacter pasteurianus IFO 3283-03]
 gi|256640579|dbj|BAI06541.1| urea short-chain amide or branched-chain amino acid transporter
           permease protein [Acetobacter pasteurianus IFO 3283-07]
 gi|256643636|dbj|BAI09591.1| urea short-chain amide or branched-chain amino acid transporter
           permease protein [Acetobacter pasteurianus IFO 3283-22]
 gi|256646691|dbj|BAI12639.1| urea short-chain amide or branched-chain amino acid transporter
           permease protein [Acetobacter pasteurianus IFO 3283-26]
 gi|256649744|dbj|BAI15685.1| urea short-chain amide or branched-chain amino acid transporter
           permease protein [Acetobacter pasteurianus IFO 3283-32]
 gi|256652732|dbj|BAI18666.1| urea short-chain amide or branched-chain amino acid transporter
           permease protein [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256655788|dbj|BAI21715.1| urea short-chain amide or branched-chain amino acid transporter
           permease protein [Acetobacter pasteurianus IFO 3283-12]
          Length = 534

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 99/306 (32%), Gaps = 18/306 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++ A GL+I  G +G++++       IGAY+  ++      ++  L PVS ++
Sbjct: 246 LSYGSVLLLAATGLAITFGVMGVINMAHGELMMIGAYTTWMVQQGIRATVPWLEPVSLLV 305

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +      +           L     +     + +L  W      +  I        +   
Sbjct: 306 AIPVAFCVCGLLGILIERGL--IRFLYGRPLETLLATWGLSLILQQAIRSIFGPTNIAVV 363

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             + +    +    V   +    + +    +  +++L +R+T++    R +  N++    
Sbjct: 364 TPAWLSG-SWMIGSVDITLNRLAIFVFAFLVLGALMLVMRKTSLGLEMRAVTQNRRMAAL 422

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +          AF + +   G+AG   A S+          S  I    +V+ GG+ +L 
Sbjct: 423 MGIRTPRVDALAFGLGAGLAGLAGV--AVSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLW 480

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L    ++                          +++ + L I      +  +
Sbjct: 481 GTLAAAMTLGMGGKILEPTIGAVSAK-------------IAILVLVILYIQRHPRGMFPV 527

Query: 343 RTPSNF 348
           R     
Sbjct: 528 RGRGVE 533


>gi|134101413|ref|YP_001107074.1| ABC transporter permease protein [Saccharopolyspora erythraea NRRL
           2338]
 gi|291008408|ref|ZP_06566381.1| ABC transporter permease protein [Saccharopolyspora erythraea NRRL
           2338]
 gi|133914036|emb|CAM04149.1| ABC transporter permease protein [Saccharopolyspora erythraea NRRL
           2338]
          Length = 292

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/309 (13%), Positives = 85/309 (27%), Gaps = 27/309 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ +      IY + A GL++V G + +++      Y IGAY    +    GLS    +
Sbjct: 6   QYLGNGLTLGAIYALMAVGLTLVFGYMNVVNFAHGEFYMIGAYLSYTVADVLGLSFISGL 65

Query: 97  PVSAMISGACGMIMGL-PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
             + + +   G+ +      K R        ++ +     +L     +            
Sbjct: 66  LAAVLGAIVLGLAIDSGVLRKLREHEDIALPILATIGISILLQNGAMLVWSPVPQTAGSP 125

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                        ++++ +     +  L + RT I    R    
Sbjct: 126 FS-----------SDSIDLLVARTTPRNIFIVVVVAVTILAAHLLMTRTRIGLDMRATFQ 174

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A + +   +       FA+ +A   ++G   A                     +VIL
Sbjct: 175 DSTASWLMGVNVRRVYAMTFALGAALAALSGVLIATIFQI--TPTMGALATAKSFVVVIL 232

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S         +L  V  L  G     +           +                 
Sbjct: 233 GGLGSFPGAIVGGLLLGLVESLGAGYLSAGYKDAFGLLVLLAVLLLL------------- 279

Query: 336 SHSLLRLRT 344
              L   R 
Sbjct: 280 PQGLFGARK 288


>gi|332670345|ref|YP_004453353.1| inner-membrane translocator [Cellulomonas fimi ATCC 484]
 gi|332339383|gb|AEE45966.1| inner-membrane translocator [Cellulomonas fimi ATCC 484]
          Length = 477

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 84/307 (27%), Gaps = 28/307 (9%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +  +   +  + + GLS++ G+ GL +       ++G     +     GL +     ++ 
Sbjct: 195 NGLVFGTLLALASVGLSLIYGTTGLSNFAHGEQVSLGGILAYVGTQVVGLPLLPSAVIAV 254

Query: 101 MISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           ++    G +      +   R     I  +I++      +        G   + +      
Sbjct: 255 VLGALSGWLQDAGLWRPLRRRGVGMIQQMIVTIGLSMAVSYVFQFFFGAGPLRIV----- 309

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V   +   + L         +  +L RT    A R + DN  
Sbjct: 310 -------TETPTSVAIGPVRLTVTTLWSLAIAVVALVGVAYFLLRTRAGRATRAVADNPA 362

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +   ++       + + +    + G          S         +++ + V LGG+
Sbjct: 363 LSAASGISVNRTIRLVWTIGAGLAALGGVLVGLYFGATSWYAGGALL-LLMFAAVTLGGL 421

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +       + ++  VVEL                    +                R   
Sbjct: 422 GAAFGALAGSIVIGLVVELSSLWIPTDMRYASALVILILVLLV-------------RPQG 468

Query: 339 LLRLRTP 345
           +L   T 
Sbjct: 469 ILGRATR 475


>gi|269793005|ref|YP_003317909.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100640|gb|ACZ19627.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 289

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 54/307 (17%), Positives = 101/307 (32%), Gaps = 25/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY +   GL++V G L +L +     YA+GAY   +  +++  S+ + + +
Sbjct: 8   LLNGLAIGAIYGLTTLGLALVYGILRILHVAHAGVYAVGAYV-GLFAAQWTGSLLMGVLL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +S   G+ +          Y     LI S      L +   +  G            
Sbjct: 67  AGAVSSLLGVAIERLFYFPLLKYPPYVPLIGSIAVFISLEELIRLVAGPEIRS------- 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 + I         V     +  V L    +  S+     RT    A R    + +
Sbjct: 120 ----FPAEIPLPALKLGVVTVSPPLLAVYLTTGLVLLSLWFVTTRTEFGLAMRAASQDME 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL           F + S    +AG       +++             ++++++GGM
Sbjct: 176 VASSLGVNSHRVVSLTFVIGSFTAALAGVLVGVYYNQV-YPSMGAVPAYKTLALIVVGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A+ +L     L  G              +  +    L  IA+ LV+L+R   
Sbjct: 235 GSVPGAVMASLLLGVAETLLIGYA------------NVPLPRDALAFIAMILVLLVRPKG 282

Query: 339 LLRLRTP 345
           L   R  
Sbjct: 283 LFARRPR 289


>gi|213967980|ref|ZP_03396126.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301383705|ref|ZP_07232123.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302131592|ref|ZP_07257582.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213927323|gb|EEB60872.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
          Length = 529

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAMIGMV 315

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 374 VLPYNRIVIIAFALFVVLLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVTAAFGLGIANKI 491

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526


>gi|222529378|ref|YP_002573260.1| inner-membrane translocator [Caldicellulosiruptor bescii DSM 6725]
 gi|222456225|gb|ACM60487.1| inner-membrane translocator [Caldicellulosiruptor bescii DSM 6725]
          Length = 294

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 93/289 (32%), Gaps = 10/289 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + + G ++V G + L++      + +GAY   +  +   L +   + V
Sbjct: 8   LINGITLGSIYALISLGYTMVYGIIKLINFAHGDIFMVGAYIAYLSVTYLKLGLIPSLIV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +     GM++   + K   +   I+ LI +     +L     I  G         +  
Sbjct: 68  SMIFCSILGMLIEKFAYKPLRNSPRISALITAIGVSLLLENLMQIIMGADSRVFPRLVAE 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             ++      Y+L+    L   +   +++T I  A R +  +  
Sbjct: 128 KNYH---------LFQGRIVVNNKQIYLLIITVLLMIILNFVVKKTKIGKAMRAVSQDMD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA    AG       + I+P M      +      + GG+
Sbjct: 179 AARLMGINVDTTISYTFAIGSALAAAAGVLVGLYYNTINPLM-GVLPGLKAFIAAVFGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +         L  +  L  G +   +   + F     +       + 
Sbjct: 238 GIIPGAMLGGFSLGIIETLVSGYSSSMYKDAVAFALLILILIIKPSGLL 286


>gi|209884620|ref|YP_002288477.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Oligotropha
           carboxidovorans OM5]
 gi|209872816|gb|ACI92612.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Oligotropha
           carboxidovorans OM5]
          Length = 304

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 88/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   IY + A G ++V G +G+++      + IG +  +I            +P+
Sbjct: 8   LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLVLVSLGMTAVPL 67

Query: 99  SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             ++     M +                            I    + +  + +    R+ 
Sbjct: 68  VLLLVVLIAMAITALYGWTVERIAYRPLRQSFRLAPMLSAIGMSFVLSNFSQVAQGARVK 127

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   V      F      V        V+L    L A     + RT +    R    +Q
Sbjct: 128 PVPPIVTGGYTLFESNGFVVRLSNIQIIVVLTTVVLLAIFSWVVTRTRLGRDMRACEQDQ 187

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                L   +       F + +A   +AG  +      +   M  F   I   +  +LGG
Sbjct: 188 TMASLLGVDVDRTISMTFVIGAALAAVAGMMYLLYYGVVDFFM-GFVAGIKAFTAAVLGG 246

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + SL         +  +  L        +  +  F               L +V++    
Sbjct: 247 IGSLPGAMLGGLAIGLIETLWSAYFSSEYKDVAAFS-------------ILIVVLIFMPT 293

Query: 338 SLLRL 342
            LL  
Sbjct: 294 GLLGR 298


>gi|330873927|gb|EGH08076.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 469

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 77/288 (26%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G  G++++       +GAYS  ++           I    +I+      +       
Sbjct: 196 ITFGLPGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 255

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 256 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 313

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 314 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 373

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 374 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 431

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 432 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 466


>gi|319780322|ref|YP_004139798.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166210|gb|ADV09748.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 320

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 61/323 (18%), Positives = 125/323 (38%), Gaps = 24/323 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+   ++  LF+ +    +Y   +  +I++  +FA G +++ G +GLLSL   + +A G 
Sbjct: 11  ALHLGVVGLLFVLSFLLPEYYHGLLARIMVLAVFAMGYNMLFGYVGLLSLGHAMFFAAGL 70

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y   +   + G S+               +++GL +L+  G    I T++ +++F  +++
Sbjct: 71  YGAGLAVIQLGWSVPAAFAAGLACGVVVSLVIGLLALRTTGVAFMIVTMMFAQVFYLLIL 130

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            +   T G  G+ V      L              S  +      Y   L +  +   + 
Sbjct: 131 YFATWTGGDQGMVVPQPARVLSF---------GATSLELTNPTVRYMTALALFSIVLLVT 181

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           L + R+        IR+N++    L       KL+A  +S      +GA +A     +  
Sbjct: 182 LAIVRSRYGRVLVAIRENEERTKMLGYDTFSNKLAAVVISGIICAASGAAYALLFGYVGS 241

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                  +I+ +  V+LGG  +       T  +  V+++  G                  
Sbjct: 242 SFASVQYSILPLLWVLLGGAATTLGPLIGTLFMYYVIDITSGY---------------TS 286

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
            +  ++ IAL L++L     +L 
Sbjct: 287 AYLLIVGIALILLVLFFPKGILG 309


>gi|107024510|ref|YP_622837.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054]
 gi|116688111|ref|YP_833734.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
 gi|170731460|ref|YP_001763407.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
 gi|254246681|ref|ZP_04940002.1| ABC branched-chain amino acid family transporter, inner membrane
           subunit [Burkholderia cenocepacia PC184]
 gi|105894699|gb|ABF77864.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116646200|gb|ABK06841.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia cenocepacia HI2424]
 gi|124871457|gb|EAY63173.1| ABC branched-chain amino acid family transporter, inner membrane
           subunit [Burkholderia cenocepacia PC184]
 gi|169814702|gb|ACA89285.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
          Length = 325

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 46/284 (16%), Positives = 113/284 (39%), Gaps = 15/284 (5%)

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           +G  GLLS    +  A   Y+        G +  L +    + +   G+++GL +++ +G
Sbjct: 44  IGYTGLLSFGHAMFLATAGYATGYSMQTLGFTPELGVLAGTVAATVLGLVVGLFAIRRQG 103

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
            Y A+ TL  +++   I ++                       ++ + R   F    +  
Sbjct: 104 IYFAMITLAFAQMVYFIYLQA--------------PFTHGEDGLQGVPRGRLFGLLDLSN 149

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
           ++ +YYV+L +   + + I+ +  +        I++N+    SL       KL AF +S+
Sbjct: 150 DVALYYVVLAVVVAACAFIVRVVHSPFGQVLVAIKENEARAISLGYDTDRFKLLAFILSA 209

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
              G+AG+         +     ++ + +V+ + ++GGM +L       A+++ + +   
Sbjct: 210 GLAGLAGSLKVLVLGFETLSDAYWTMSGLVVLMTLVGGMGTLFGPLLGAALIVALEDRLG 269

Query: 300 GMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +  +  + + + +  S     T +  +     +L     ++  
Sbjct: 270 DIGEWLASTTGVAWFHSLGESATIVTGLIFIACVLAFRRGIVGE 313


>gi|332528413|ref|ZP_08404405.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
 gi|332042092|gb|EGI78426.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
          Length = 411

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 44/329 (13%), Positives = 90/329 (27%), Gaps = 36/329 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL----------- 84
             +  ++  + L Y   A GL ++ G  G+LSL   + + +G Y+  +            
Sbjct: 32  DIFRLNLVGKYLSYGFVALGLVMLWGYGGVLSLGQGVFFGLGGYAMAMFLKLEASDPVST 91

Query: 85  -GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
                      +                          L    L     +     +   +
Sbjct: 92  KIQSTPGIPDFMDWNQLTALPLWWEPFKHLPFALIAVVLIPTLLAFVIGYAMFKRRVGGV 151

Query: 144 TNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
                           I            +  L     +       +  +YY+   +   
Sbjct: 152 YFAIITQAVALILTVLIVGQQGYTGGINGMTDLKTLMGWDIRTDGAKYLLYYLCAFLLLG 211

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  + LW++++ +      +RD +         +   K+  F +++A  G+ GA F    
Sbjct: 212 TILLCLWIQKSKLGTLLLAMRDKEDRVRFSGYDVAMFKVFVFCLAAALSGIGGALFTLQV 271

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             +SP       +I ++    +GG  SL      T ++                    F 
Sbjct: 272 GFMSPSFVGIVPSIEMVIYAAVGGRMSLVGAVYGTLLVNFGKTY--------------FS 317

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +F      LM      V +     L  L
Sbjct: 318 ETFPDLWLFLMAALFIGVTMAFPEGLAGL 346


>gi|11498989|ref|NP_070222.1| branched-chain amino acid ABC transporter, permease protein
           (braE-4) [Archaeoglobus fulgidus DSM 4304]
 gi|2649180|gb|AAB89853.1| branched-chain amino acid ABC transporter, permease protein
           (braE-4) [Archaeoglobus fulgidus DSM 4304]
          Length = 449

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 64/340 (18%), Positives = 117/340 (34%), Gaps = 51/340 (15%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS------------------ 80
           I ++ +   +Y + +  L+I  G  G+ +    +A  +GA++                  
Sbjct: 111 ILNLALWFGLYTIVSLSLNIEYGFAGIPNFGRALAVLMGAFTVGGLVNRLLMLAFNIQGG 170

Query: 81  ----------------YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
                                +     I L + ++ +I    G +  LPS K   DYLAI
Sbjct: 171 ELKEATGRLASTVNEIIANNPAFGIGLILLSVVLAMIIGAVTGALFILPSAKLSEDYLAI 230

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
             L +SE+   +      I  G  G+ V D L FL    RS                   
Sbjct: 231 TLLAISEVAFMVFYYHTGIIGGYYGVSVPDVLAFLPGQYRSHA---------------FA 275

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            + L    L    +  L  +      R +R+N+    ++  +++  ++   A+ S+   +
Sbjct: 276 VIALLFALLVYIFVERLLNSPYGRLLRAMRENESVVEAMGKSVMTLRIKTAAIGSSIAAI 335

Query: 245 AGAFFAASRDRISPDMFKFSEN-IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           AGA F+     +    F   E       +V+LGG  +   +   T   + V  L      
Sbjct: 336 AGALFSLYSVNVIATSFSRVEWTFYPFLMVLLGGAGNNRGVVVGTFTFVLVKILLTMY-K 394

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
           Y   S L            L  + ++ V+L R   L++ +
Sbjct: 395 YEIKSALMLPFEAVWLEYILFGLLMYFVLLYRPEGLIKEK 434


>gi|224367401|ref|YP_002601564.1| LivH1 [Desulfobacterium autotrophicum HRM2]
 gi|223690117|gb|ACN13400.1| LivH1 [Desulfobacterium autotrophicum HRM2]
          Length = 302

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 95/306 (31%), Gaps = 17/306 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
                 +  IY + A G ++V G + L++      Y IGA++ +I+ S   ++    + V
Sbjct: 10  FLGGLTRGSIYALIALGYTMVYGIIQLINFAHGEIYMIGAFTGLIVSSVLTMAGMPTLGV 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             M + A  +                          + LI    ++       +  +   
Sbjct: 70  VIMAAMAAVIYSSAYGYTMEKIAYKPLRNA---PRLSALISAIGMSLFLQNYVLLAQTSD 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +  F  +     +       +L     +   + + ++ T I  A R    ++ 
Sbjct: 127 FLPFPSLIPDFDFWEPYAHLISSPELVILATTFVVMMLLTVLIKFTRIGKAMRATSQDKI 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       F V SA   + G   A+   +I+  M  F   I      +LGG+
Sbjct: 187 MAALLGINVDRIISVTFVVGSATAAIGGLLIASHIGQINFYM-GFIAGIKAFVAAVLGGI 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+      + +L        G     +  +  F             I L ++++ R   
Sbjct: 246 GSIPGAVLGSFVLGWTESFFTGYISSDYEDVFAF-------------IILVVILIFRPSG 292

Query: 339 LLRLRT 344
           +L    
Sbjct: 293 ILGKSE 298


>gi|206558423|ref|YP_002229183.1| putative branched-chain amino acid ABC transporter permease
           [Burkholderia cenocepacia J2315]
 gi|198034460|emb|CAR50325.1| putative branched-chain amino acid ABC transporter permease
           [Burkholderia cenocepacia J2315]
          Length = 325

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 47/284 (16%), Positives = 114/284 (40%), Gaps = 15/284 (5%)

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           +G  GLLS    +  A   Y+        G +  L + V  + +   G+++GL +++ +G
Sbjct: 44  IGYTGLLSFGHAMFLATAGYATGYSMQTLGFTPELGVLVGTVAATLLGLVVGLFAIRRQG 103

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
            Y A+ TL  +++   I ++                       ++ + R   F    +  
Sbjct: 104 IYFAMITLAFAQMVYFIYLQA--------------PFTHGEDGLQGVPRGRLFGLLDLSN 149

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
           ++ +YYV+L +   + + I+ +  +        I++N+    SL       KL AF +S+
Sbjct: 150 DVALYYVVLVVVVAACAFIVRVVHSPFGQVLVAIKENEARAISLGYDTDRFKLLAFILSA 209

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
              G+AG+         +     ++ + +V+ + ++GGM +L       A+++ + +   
Sbjct: 210 GLAGLAGSLKVLVLGFETLSDAYWTMSGLVVLMTLVGGMGTLFGPLLGAALIVALEDRLG 269

Query: 300 GMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +  +  + + + +  S     T +  +     +L     ++  
Sbjct: 270 DIGEWLASTTGVAWFHSLGESATIVTGLIFIACVLAFRRGIVGE 313


>gi|28872001|ref|NP_794620.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|28855254|gb|AAO58315.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|331014670|gb|EGH94726.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 529

 Score = 80.3 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAMIGMV 315

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 374 VLPYNRIVIIAFALFVVLLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVTAAFGLGIANKI 491

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526


>gi|300721694|ref|YP_003710970.1| high-affinity branched-chain amino acid ABC transporter membrane
           protein [Xenorhabdus nematophila ATCC 19061]
 gi|297628187|emb|CBJ88742.1| high-affinity branched-chain amino acid transport protein (ABC
           superfamily, membrane) [Xenorhabdus nematophila ATCC
           19061]
          Length = 308

 Score = 80.3 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 85/305 (27%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y I +Y   I+ +   +    +  +
Sbjct: 12  MLNGLTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFIVIAALMMMGIDVGWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
               +    +I+                     +   I  I           +    R  
Sbjct: 72  LISAAFIASIIIASTYGWSIERAAYRPIRNSKRLIALISAIGMSIFLQNYVSLSQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L   V                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPGLVTGQWSLGESNGFSASISAMQITIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMAGLLGINTDRVISMTFVIGAVMAAIAGGLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     L        +  ++ F               L  V+L+   
Sbjct: 251 IGSIPGAVLGGLILGVSEALTSAYLSTEYKDVVSF-------------ALLIGVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|227820403|ref|YP_002824374.1| urea or short-chain amide ABC transporter permease [Sinorhizobium
           fredii NGR234]
 gi|227339402|gb|ACP23621.1| probable urea or short-chain amide ABC transporter, permease
           protein [Sinorhizobium fredii NGR234]
          Length = 387

 Score = 80.3 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 58/369 (15%), Positives = 107/369 (28%), Gaps = 39/369 (10%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLG------ATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           L++   I   + +   +L+                 Y+ S+  + L Y + A  L +V G
Sbjct: 10  LDRTIVIAVAILLALAVLVPALNLLTAPDHPLHVPTYLVSLFGKYLTYALLALALDLVWG 69

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G+LSL     +A+G Y+  +   R   +                    LP   +  D 
Sbjct: 70  FCGILSLGHAAFFALGGYAIGMYLMRQIGARGSYGNPLLPDFMVFLNWKELPWFWYGFDM 129

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTT 162
              A L++  +   I   +                             +  D  +     
Sbjct: 130 FWFAALMVVLVPGLIAFVFGWFAFRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNG 189

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +        F          ++        +S  I   + R+        +RD +     
Sbjct: 190 LTDFKDILGFNIQADATRAALFAASALALAVSLVITSGIVRSKFGKVLVALRDAESRTRF 249

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   +   KL AF VS+   G+AGA +      I+P  F+   +I V+    +GG  +L 
Sbjct: 250 LGYRVEHMKLFAFTVSAMMAGVAGALYVPQVGIINPGEFEPGNSIEVVIWTAVGGRGTLI 309

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  ++ G   +              F  +F       +     LV L     ++  
Sbjct: 310 GPIIGAILVNGGKSI--------------FTAAFPEFWLFALGGLFVLVTLFLPKGVVGT 355

Query: 343 RTPSNFLER 351
                   R
Sbjct: 356 AQHYLSRRR 364


>gi|167567694|ref|ZP_02360610.1| inner-membrane translocator [Burkholderia oklahomensis EO147]
          Length = 391

 Score = 80.3 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 45/339 (13%), Positives = 92/339 (27%), Gaps = 36/339 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------ 84
                  +  ++  + L Y   A GL I  G  G+LSL   + + +G Y+  +       
Sbjct: 52  FPLALDTFRLNLMGKYLTYAFVAIGLVIAWGYGGVLSLGQGVFFGLGGYAMAMFLKLEAS 111

Query: 85  ------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
                           +         A                +    L     +     
Sbjct: 112 DPAATRTQTTPGIPDFMDWNQLTALPAWWKPFHDLPFSILAVLVVPTALAFVIGYAMFKR 171

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLL 188
           +   +        VA  L  L    +                 +       ++ +Y+V  
Sbjct: 172 RVGGVYFAIITQAVALILSVLIVGQQGYTGGVNGITDLRTLLGWDIRTDHAKLILYFVNA 231

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +   +     +++R+ +      +RD +         +   K+ AF +++    + GA 
Sbjct: 232 ALLIGALLACRYVQRSKLGTLLLAMRDKEDRVRFSGYDVAMFKVFAFCLAAMLAAVGGAM 291

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           F      +SP       +I ++    +GG  SL        ++                 
Sbjct: 292 FTLQVGFMSPSFVGIVPSIEMVIYAAIGGRMSLVGAVYGAILVNLGKSW----------- 340

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
              F  SF      LM      V+++  + L  L     
Sbjct: 341 ---FSESFPNLWLYLMAAMFIGVVMVFPNGLAGLYEEHV 376


>gi|196036756|ref|ZP_03104147.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus W]
 gi|196047045|ref|ZP_03114264.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus 03BB108]
 gi|228945580|ref|ZP_04107930.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|195990639|gb|EDX54616.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus W]
 gi|196022149|gb|EDX60837.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus 03BB108]
 gi|228814098|gb|EEM60369.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
          Length = 317

 Score = 80.3 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 60/331 (18%), Positives = 131/331 (39%), Gaps = 31/331 (9%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY   +
Sbjct: 2   LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61

Query: 84  LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           L  R      + ++ I  + +IS     I+GL SL+ +  + A+ TL +S++F  +  KW
Sbjct: 62  LFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T+G  G        F                         YYV L    +   ++  
Sbjct: 122 RGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVLLRL 162

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++  +
Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVNTTV 222

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F     +  + + ++GG+ +L            +       +  Y+ S L  +     R 
Sbjct: 223 FSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIFERW 273

Query: 321 TTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           T ++ +   +V+L+    L+        ++R
Sbjct: 274 TIILGLLYIIVLLVFPKGLVGTVKSLKNMKR 304


>gi|316935919|ref|YP_004110901.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315603633|gb|ADU46168.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 355

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 47/338 (13%), Positives = 110/338 (32%), Gaps = 14/338 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L ++  +++              ++  +I I+        +++G  G +S    + Y
Sbjct: 13  VLSLLLIAIVVVLALTPFVFPGAKPLNVAAKICIFAALVASYDLLLGYTGTVSFAHTMFY 72

Query: 75  AIGAYSYVILGSRYGLSIWL---LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
            IG+Y+  I     G S       I +   ++    + +GL SL+    + A+ TL ++ 
Sbjct: 73  GIGSYAVAIALYGMGPSWPAVGTGIAIGLPLAALLALGIGLFSLRVEAIFFAMITLAVAS 132

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            F  +  +   +T G+ G   +             +    F    +      YY++L  C
Sbjct: 133 AFLVLASQLSWLTGGEDGRSFSLP----ELLRPGTVFIKDFFGVRITGRTLTYYIILIGC 188

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                 +L +  +      + +R+N+    +L    +F    A  +++     AG   A 
Sbjct: 189 AGMILALLRVVNSPFGRVLQAVRENRFRAEALGYRTVFHLTYANVIAALVAAAAGVLNAM 248

Query: 252 SRDRI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                       FS  + ++ +V++GGM ++        I I        +      +  
Sbjct: 249 WLRYAGPDTSLSFSIMLDILLMVVIGGMGTIYGAIIGATIFILAQNYLQALMGAASEATA 308

Query: 311 KFDCSFNMR------HTTLMVIALFLVILMRSHSLLRL 342
                              + +     +      ++  
Sbjct: 309 AVGLPLLPNLLHPDRWLLWLGLLFVASVYFFPTGIVGR 346


>gi|91780544|ref|YP_555751.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693204|gb|ABE36401.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 314

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 62/328 (18%), Positives = 126/328 (38%), Gaps = 30/328 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L VV   L+ +     +       +   +L++ + A G  +V G  GLLS         G
Sbjct: 8   LIVVAVGLIAIGFQYLRGDGGAAFLVGLMLVWAIAALGYDLVFGLSGLLSFGHAAFLGSG 67

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL +++ L   + + +SA++     ++ G  +L+  G Y  + TL ++++   +L
Sbjct: 68  AYAVAILTTQWMLPFPVALFISAVLGALLALVFGAAALRASGIYCGLLTLALAQLTNILL 127

Query: 138 -IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            ++ + +T G  GI    R                    F+  ++     +  +   + +
Sbjct: 128 TVRLQGLTGGDDGISGVSRPIKY--------------LQFLTDDLNYVVYVGCIFLGALA 173

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +   LR +      R    N+     L   +   +L+ FAVS A+ G+AG   A      
Sbjct: 174 LSALLRLSPFGQVLRAASQNEVRAEQLGWNVRRYRLAIFAVSGAYTGIAGGLIAGLTQFA 233

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
            P + ++S +  +I + +LGG  SL        + I + E+      ++           
Sbjct: 234 GPQLMQWSNSGDLIIMTLLGGRDSLLGPVVGVVLTILLREVVGSYTEHWAG--------- 284

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRT 344
                 ++ +   L  L     ++ L  
Sbjct: 285 ------ILGVVFVLCTLYMPVGVIGLWR 306


>gi|330892811|gb|EGH25472.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 300

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 50/297 (16%), Positives = 92/297 (30%), Gaps = 13/297 (4%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L L     + +   Y  ++  +IL Y + A  L +V G  GLLSL   + +A+G Y+  
Sbjct: 3   LLSLLPADNSFQVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMG 62

Query: 83  ILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           +                   W  +P     +      + L  L      L          
Sbjct: 63  MYLMRQAAGDGLPAFMTFLSWTELPWYWAGTDNFLWALCLVVLAPGLLALVFGFFAFRSR 122

Query: 133 FQNILIKWKPITNGKAGIYVADRL---YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            + +           AG+ +  R    +       +      F  S       ++   + 
Sbjct: 123 IKGVYFSIMTQALTFAGMLLFFRNETGFGGNNGFTNFRSILGFSISSQGTRATLFLATVL 182

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   S  I   L ++        +RD +             KL  + +S+   G+AGA +
Sbjct: 183 LLIASLYIGWRLAQSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALY 242

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                 I+P     + +I     V LGG  +L        ++ G+          Y+
Sbjct: 243 VPQVGIINPSEMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSWFTVAFPEYW 299


>gi|303246135|ref|ZP_07332416.1| urea ABC transporter, permease protein UrtC [Desulfovibrio
           fructosovorans JJ]
 gi|302492531|gb|EFL52402.1| urea ABC transporter, permease protein UrtC [Desulfovibrio
           fructosovorans JJ]
          Length = 378

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 50/355 (14%), Positives = 103/355 (29%), Gaps = 37/355 (10%)

Query: 11  YDKILCLLAVVYPLLLFLFLG-----ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +     L A+V+ +   L L      A     Y+  +  + L + + A  L +V G  G+
Sbjct: 14  WTVTFVLAALVFVVAPVLNLAVPEGAALHLPNYMVQLLGKFLCFAILALALDLVWGYTGI 73

Query: 66  LSLNCVIAYAIGAYSYVILGSRYG---------------LSIWLLIPVSAMISGACGMIM 110
           LSL   + +A+G Y+  +   R                    W  +P   +        +
Sbjct: 74  LSLGHALFFALGGYAMGMYLMRAMAGEGVYRSKLPDFMVFLDWKELPWFWLGFDHFWFAL 133

Query: 111 GLPSLKFRGDYLAIATLIMSEIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
            +  +                        +I            +  +  +     +    
Sbjct: 134 LVILIVPALLAFVFGFFAFRSRIKGVYFSIITQALTYAAMLLFFRNNTGFGGNNGLTDFK 193

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
           R   F  +    +  ++     +  L   +   +  + +      +RD +     L    
Sbjct: 194 RLLGFSLAEPATKTGLFLCSGLVLLLFYLLCRAVTASKLGRVLTAVRDAESRVMFLGYDP 253

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
           +  KL  + +S+    +AGA +      I+P     + +I +   V LGG  +L+     
Sbjct: 254 LRYKLFVWTLSAFMCAVAGALYVPQVGIINPSEMAPANSIEIAIWVALGGRGTLAGPLLG 313

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              + G   +              F          ++     L  L     LL L
Sbjct: 314 AFAVNGAKSI--------------FTAVAPDLWLFVLSAIFILATLFLPRGLLGL 354


>gi|299066356|emb|CBJ37540.1| putative high-affinity branched-chain amino acid transport system
           permease (livM or livH) [Ralstonia solanacearum CMR15]
          Length = 396

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 47/345 (13%), Positives = 95/345 (27%), Gaps = 32/345 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               V    L+           Y  ++  +I+ Y + A  L +V G  G+LSL   + +A
Sbjct: 32  VCAGVPVCALVVPAGHPLHLSAYALTLVGKIMCYALAALALDLVWGYCGILSLGHGLFFA 91

Query: 76  IGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           +G Y+  +                                          +++ L     
Sbjct: 92  LGGYAMGMYLMRAIGRDGVYQSDLPDFMVFLDWKALPWFWHGTEHFAWAALLVVLVPGVL 151

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
              +   A     +     +I            +  +  +          R   FP + V
Sbjct: 152 AWLFGFFAFRSRVKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGFPIAAV 211

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                ++        L+      +  +        IRD +        + +  KL  +  
Sbjct: 212 STRTVLFVATFIALVLAFIACRAIVTSKFGRVVTAIRDAEARVMFSGYSPLGYKLFVWTF 271

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           S+   G+AGA +      I+P       +I +   V +GG  +L+       ++ G   +
Sbjct: 272 SAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAVWVAVGGRGTLAGPIIGAFLVNGAKTV 331

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                                    ++     LV L   + +L L
Sbjct: 332 LTAW--------------VPEYWLFVLGAVFVLVTLFLPNGVLGL 362


>gi|294055681|ref|YP_003549339.1| urea ABC transporter, permease protein UrtC [Coraliomargarita
           akajimensis DSM 45221]
 gi|293615014|gb|ADE55169.1| urea ABC transporter, permease protein UrtC [Coraliomargarita
           akajimensis DSM 45221]
          Length = 369

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 52/355 (14%), Positives = 107/355 (30%), Gaps = 37/355 (10%)

Query: 10  KYDKILCLLAVVYPLLLFLFL-----GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
           K   I  ++A++  +L  L       G      +  S+  + L Y + A  L+I+ G  G
Sbjct: 8   KEAGIFAIVAILLMMLPMLNAWGPESGLLSVSSFQVSLWGKYLTYAVLAMSLNILWGYTG 67

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYG----------LSIWLLIPVSAMISGACGMIMGLPS 114
           LL L   + +A+G Y+  +                    + +    +            +
Sbjct: 68  LLCLCQSLFFALGGYAMGMYLMLMIGERGAYNSVLPDFMVFLGYQELPIHWKPFYSFWFA 127

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR--------SL 166
                    +  LI   +     IK    +     +  A  L F                
Sbjct: 128 SGAVLWVPGLVALIFGFLAFRSRIKGVYFSILTQALTYACCLMFFRNDFTFGGNNGFTDF 187

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                   +       +Y   + +  L+  I   L  +      + IRD++        +
Sbjct: 188 KDILGMDLNADSTTRGLYIASVLLLLLTYLITSGLLASKFGKVQQAIRDSENRVLFSGYS 247

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
               KL  F +S+   G AGA +      I+P   + ++++ V+  V +GG  +      
Sbjct: 248 TTSFKLVIFVLSAMIAGAAGALYVPQVGGINPSAMEAAKSLEVVVWVAVGGRGTKWGPVI 307

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              ++  +                    +F      +M      V+L+    ++ 
Sbjct: 308 GAILVNLLKSYTT--------------QAFPDYWLIIMGGLFVFVVLVMPDGIVG 348


>gi|161621009|ref|YP_001594895.1| inner-membrane translocator [Brucella canis ATCC 23365]
 gi|161337820|gb|ABX64124.1| inner-membrane translocator [Brucella canis ATCC 23365]
          Length = 332

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 56/338 (16%), Positives = 131/338 (38%), Gaps = 34/338 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +   L+  +         +     +++L + +FA   ++++G  G+LS      +
Sbjct: 25  LSAIVLGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 80

Query: 75  AIGA-YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             GA Y        +G+S  L + +  + + A G+++G  +++ +G Y  + TL ++++F
Sbjct: 81  GGGAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMF 140

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
               ++                       ++ + R F F    +   + MYY +L +  L
Sbjct: 141 FFFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVL 186

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
               I  +  +      +++R+N+    SL  ++   KL+AF +S+   G+AG   A   
Sbjct: 187 GVFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVF 246

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
              +     +  +  VI + +LGG+ +L       A ++ +       +F          
Sbjct: 247 QFATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV-------- 298

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                  T +  +     +L+    ++     S   ++
Sbjct: 299 -------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 329


>gi|17546471|ref|NP_519873.1| amino acid ABC transporter permease [Ralstonia solanacearum
           GMI1000]
 gi|17428769|emb|CAD15454.1| probable amino acid transport system permease lipoprotein
           transmembrane [Ralstonia solanacearum GMI1000]
          Length = 440

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 49/342 (14%), Positives = 113/342 (33%), Gaps = 23/342 (6%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M    L L ++      L      L+ L L     Q +  ++  Q+ I ++FA   ++++
Sbjct: 20  MRFKPLNLARW------LIWGTTALVMLVLPLIWPQGFAITLLSQMGIMIIFALSYNMLL 73

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G+LS    +   +GA+  V L +R G +  L I     ++          +L     
Sbjct: 74  GQAGMLSFGHAVYAGLGAFVAVHLLNRIGAAPALGIGGPLAVALLPVAGGLGGALFGVLF 133

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
                    +      L   + +    + + + D     G    +               
Sbjct: 134 GYVTTRRAGTTFSMITLGIGEMVF--ASALMLPDFFGGEGGVSTNRSIGEPLLGISFGLA 191

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             +YY++   C +S +++    +T +      +RDN +    +       +     +S+ 
Sbjct: 192 RQVYYLIAVWCLISMALMYAWTQTPLGRLANAVRDNPERVAFVGYNPQRVRYLVVILSAF 251

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           F G+AGA    + + ++ +      +  V+    +GGM +         + +       G
Sbjct: 252 FAGIAGALSCINFEIVTAENVSAVRSGAVLLAAFIGGMGTFFGPIIGAVLTVFFTVALSG 311

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +   +                  + +   L+++     +  L
Sbjct: 312 ITKAW---------------LLYLGLFFVLMVMYAPGGIASL 338


>gi|163735970|ref|ZP_02143397.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter litoralis Och 149]
 gi|161390787|gb|EDQ15129.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter litoralis Och 149]
          Length = 298

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 92/303 (30%), Gaps = 21/303 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +       Y + A GL+IV   +GL++       A+G Y+ V   +    +  ++I  
Sbjct: 8   IINALSFGAEYALLALGLAIVFSVMGLVNFAHGEVIAVGGYTMVAFAALVTANPLIIIVG 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   +    + +   + +          L+ +     +L     +               
Sbjct: 68  AVGAAALTSVALERVAFRPVRYADPTTGLLTAFGVSIVLQNLFLLFISP----------R 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V       +  +    +   ++L+L+RT +  A R    + +
Sbjct: 118 PIAVTSLYFLDVPVTLFGVQISSLQIFESITTVVVIIGLVLFLQRTTLGLAMRAASLDFE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                          AF +S    G+A  F  A R  + P  F F+  +      ++GG 
Sbjct: 178 MVRLTGIRANRVFALAFLISGLLAGLACIFIMARRGSVDPH-FGFNPVLKAFVACVVGGF 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        +L  +              L+     +       +   + LV++ R   
Sbjct: 237 GSLPGAVLGGFLLGAIE----------VGMLVLLPQEYGGLKDAFVFGIIALVLVWRPDG 286

Query: 339 LLR 341
           +L 
Sbjct: 287 ILS 289


>gi|260459956|ref|ZP_05808209.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259034167|gb|EEW35425.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 349

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 51/348 (14%), Positives = 113/348 (32%), Gaps = 25/348 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQ---------KYIDSMGIQILIYVMFAWGL 56
            R   +  +  L A +   L+F       +            I +      +Y + A G 
Sbjct: 18  TRKQAWGLVGLLAAAIVAWLVFAVWPDWLNAILISKKAFVSAILNGITLAGLYFLVASGF 77

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
           +++ G +  ++L     Y +GAY    + +R G  +  +    A+++    ++      +
Sbjct: 78  TLIFGLMRNVNLAHGSLYLLGAYIGYEVTNRTGYWLLGVAAGFAVLAIVGVVMQVFVFRR 137

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
             GD L    + +        +       G   I   + L    T            S F
Sbjct: 138 LEGDDLRQTLVSIGISIVAADLMLAVWAGGTYQITTPEWLDGALTLPVITAVRSNGASVF 197

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
           + Y ++   VL     +   + L L +T +    R   D++    +    +       FA
Sbjct: 198 LTYPLYRVVVLAAAIVIGVGLWLMLHKTRVGMMIRAGVDDRAMLQASGVNVHAVFAIVFA 257

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           V +   G AG    ++      +  ++      + +VI+GGM S++  A    ++    +
Sbjct: 258 VGAGLAGFAGVVGGSALSVAPGEDVRYLL--ASLVVVIVGGMGSITGAAIGALLIGLAEQ 315

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +                  F      L  + + + + +R   ++    
Sbjct: 316 IGLVY--------------FPTYGIVLTFVIMVVTLAVRPQGIMGKAR 349


>gi|167574780|ref|ZP_02367654.1| inner-membrane translocator [Burkholderia oklahomensis C6786]
          Length = 391

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 45/339 (13%), Positives = 92/339 (27%), Gaps = 36/339 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------ 84
                  +  ++  + L Y   A GL I  G  G+LSL   + + +G Y+  +       
Sbjct: 52  FPLALDTFRLNLMGKYLTYAFVAIGLVIAWGYGGVLSLGQGVFFGLGGYAMAMFLKLEAS 111

Query: 85  ------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
                           +         A                +    L     +     
Sbjct: 112 DPAATRTQTTPGIPDFMDWNQLTALPAWWKPFHDLPFSILAVLVVPTALAFVIGYAMFKR 171

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLL 188
           +   +        VA  L  L    +                 +       ++ +Y+V  
Sbjct: 172 RVGGVYFAIITQAVALILSVLIIGQQGYTGGVNGITDLRTLLGWDIRTDHAKLILYFVNA 231

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +   +     +++R+ +      +RD +         +   K+ AF +++    + GA 
Sbjct: 232 ALLIGALLACRYVQRSKLGTLLLAMRDKEDRVRFSGYDVAMFKVFAFCLAAMLAAVGGAM 291

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           F      +SP       +I ++    +GG  SL        ++                 
Sbjct: 292 FTLQVGFMSPSFVGIVPSIEMVIYAAIGGRMSLVGAVYGAILVNLGKSW----------- 340

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
              F  SF      LM      V+++  + L  L     
Sbjct: 341 ---FSESFPNLWLYLMAAMFIGVVMVFPNGLAGLYEEHV 376


>gi|328951561|ref|YP_004368896.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451885|gb|AEB12786.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
          Length = 271

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 57/287 (19%), Positives = 113/287 (39%), Gaps = 37/287 (12%)

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
           +++ G  G ++L     + +GAY+   L +  G+     +  S + +G  G+ +G  SL+
Sbjct: 21  NLITGVAGQVTLGHAAFFGVGAYTLAYLTTEAGVGFGPALAASVLAAGVVGLALGAVSLR 80

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
            R D+LAIAT+ ++ +     +       G  GI    R                     
Sbjct: 81  LREDFLAIATIGVNFVAVAAFLYLPYF-GGAFGISDIPRP-------------------- 119

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
               +  + ++L     +A +   +R + +  A   +R+++ A  +L   +   K++AFA
Sbjct: 120 -AGPLGFFGLVLLAFAFTAWLHERVRASDLGLALLALRESEAAAAALGVDVRRFKVTAFA 178

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           +  A  G+AG  +A+    I P+ F F  ++ ++++V +GGM +L        +L G  +
Sbjct: 179 LGCALAGLAGGLYASYIRVIHPEDFGFPLSVTLLAMVAVGGMGTLWGPIAGAVLLGGFAQ 238

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
               +  Y                           +  R   LL  R
Sbjct: 239 AFAFVQNYQLFLYGLLLALT---------------MRYRPQGLLGRR 270


>gi|110678816|ref|YP_681823.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter denitrificans OCh 114]
 gi|109454932|gb|ABG31137.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter denitrificans OCh 114]
          Length = 298

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 91/303 (30%), Gaps = 21/303 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +       Y + A GL+IV   +GL++       A+G Y+ V   +    +  +++  
Sbjct: 8   IINALSFGAEYALLALGLAIVFSVMGLVNFAHGEVIAVGGYTMVAFAALVTANPLIIVVG 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   +    + +   + +          L+ +     +L     +               
Sbjct: 68  AVAAAALTSVALERVAFRPVRYADPTTGLLTAFGVSIVLQNLFLLFISP----------R 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V       +  +    +   ++L+L+RT +  A R    + +
Sbjct: 118 PIAVTSLYFLDVPVTLFGVQISSLQIFESITTVVVIVGLVLFLQRTTLGLAMRAASLDFE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                          AF +S    G+A  F  A R  + P  F F+  +      ++GG 
Sbjct: 178 MVRLTGIRANRVFALAFLISGLLAGLACIFIMARRGSVDPH-FGFNPVLKAFVACVVGGF 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        +L  V      +    +                 +   + LV++ R   
Sbjct: 237 GSLPGAVLGGFLLGAVEVSMLVLLPQEYGG----------LKDAFVFGIIALVLVWRPDG 286

Query: 339 LLR 341
           +L 
Sbjct: 287 ILS 289


>gi|312875930|ref|ZP_07735920.1| inner-membrane translocator [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797411|gb|EFR13750.1| inner-membrane translocator [Caldicellulosiruptor lactoaceticus 6A]
          Length = 327

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 90/289 (31%), Gaps = 10/289 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + + G ++V G + L++      + +GAY   +  +   L +   + +
Sbjct: 41  LINGITLGSVYALISLGYTMVYGIIKLINFAHGDIFMVGAYIAYLSVTYLKLGLIPSLIL 100

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S       GM++   + K   +   I+ LI +     +L     I  G         +  
Sbjct: 101 SMTFCSVLGMLIEKFAYKPLRNSPRISALITAIGVSLLLENLMQIIMGADSRVFPRLVDE 160

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +            +++    +  ++L             ++T I  A R +  +  
Sbjct: 161 KNYHLLQGRIVVNNKQIYLLIITILLMIILNFVV---------KKTKIGKAMRAVSQDMD 211

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA    AG       + I+P M      +      + GG+
Sbjct: 212 AARLMGINVDTTISYTFAIGSALAAAAGVLVGLYYNTINPLM-GVLPGLKAFIAAVFGGI 270

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +         L  +  L  G     +   + F     +       + 
Sbjct: 271 GIIPGAMLGGFSLGIIETLVSGYGSSMYKDAVAFALLILILIIKPSGLL 319


>gi|147676411|ref|YP_001210626.1| branched-chain amino acid ABC-type transport system, permease
           components [Pelotomaculum thermopropionicum SI]
 gi|146272508|dbj|BAF58257.1| branched-chain amino acid ABC-type transport system, permease
           components [Pelotomaculum thermopropionicum SI]
          Length = 294

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 99/303 (32%), Gaps = 23/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++      + +GA+      +++GL + L +  
Sbjct: 8   VINGLQLGFMYALIALGYTMVYGIIKLINFAHGDVFMVGAFIGYFGFAQWGLPLPLAVIT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       GMI+   + +       I+ LI +      L  +           +      
Sbjct: 68  AMAACAVLGMIIEKIAYRPLRYAPTISILISALGVSLFLEYF---------CSLRFVFGP 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V+       +    V        V   +  +   +   + RT I  A RT+  +  
Sbjct: 119 NYRVVQRPFEEVHWSLGGVTVTNIQVMVAAVVIVMLLMLQYLIYRTKIGMAMRTVSYDHD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA     G  +A +  +I P M      +   +  +LGG+
Sbjct: 179 AARLMGVNVDSVISITFAIGSALAAAGGVLYAIAYPQIQPFM-GIMPGLKAFTAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        I+  V  L            + F               L +V+++R   
Sbjct: 238 GIIPGAVLGALIMGQVETLTAAFLSSQLRDAIAF-------------AVLIIVLMVRPAG 284

Query: 339 LLR 341
           +L 
Sbjct: 285 ILG 287


>gi|312864533|ref|ZP_07724764.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Streptococcus downei F0415]
 gi|311099660|gb|EFQ57873.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Streptococcus downei F0415]
          Length = 293

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 107/303 (35%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   IY + A G ++V G + L++      + +GA+      +   L+ W+ +  
Sbjct: 9   LVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIFMMGAFIGYWAINGLHLNFWIALIF 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +++   GM++   + +   +   I+ LI +     +L        G            
Sbjct: 69  SMVLTAILGMVIEFLAYRPLRNSTRISALITAIGVSFLLEYTMVFFFGSN---------- 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +    I+   F    V        +L     L   + L +++T +  A R +  +  
Sbjct: 119 -KRSFPQAIKMHSFDLGPVTITNIQLLILAVAIVLMIGLQLIVKQTKMGKAMRAVSVDSD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + I P M   +  I      +LGG+
Sbjct: 178 AAQLMGINVDSTISFTFALGSALAGAAGVLIALYYNSIDPLM-GMTPGIKAFVAAVLGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +  L   +               +     ++   L +++L+R   
Sbjct: 237 GLIPGAAIGGFVIGILETLSNALG-------------LSTYRDAIVYAVLIVILLVRPAG 283

Query: 339 LLR 341
           +L 
Sbjct: 284 ILG 286


>gi|307729749|ref|YP_003906973.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|307584284|gb|ADN57682.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
          Length = 360

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 92/303 (30%), Gaps = 2/303 (0%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+     L                    L++   A GL+ + G  G+LS      + +  
Sbjct: 19  ALHAAPWLVALCLPLIVDANTSGNLAYCLLWAFSAVGLAAMWGYGGILSFGQTAFFGLSG 78

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI-MSEIFQNIL 137
           YSY I    YG   +       +      ++  L         +    +  ++     +L
Sbjct: 79  YSYGIFTLNYGDIWFESWLGLGVGLMVSVVVAALIGYMIFYGGIKGVFIGIVTLSVTLVL 138

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY-EIFMYYVLLGMCFLSAS 196
             +   T G        RL               +P   +       YY++L +  +   
Sbjct: 139 ETFMSQTAGPQWAIGEARLNGYNGMGGMAPLTIPWPGGPLTLENASFYYLVLALLIVVYV 198

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++  L           IR+N +    L   I   +L  F +S    G++GA +      I
Sbjct: 199 VMRRLLDGTFGLTLIAIRENPQRAEMLGVDIRRHQLLVFVLSCTLGGLSGALYTIWGSYI 258

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +P     +   + +  V   G  ++      TA+L+ + +        Y   LL      
Sbjct: 259 TPSTMGLTAAAMPVIWVATSGRKTIGGTIFGTALLVWLSQNLAVYGSQYALILLGAILLI 318

Query: 317 NMR 319
            + 
Sbjct: 319 VVL 321


>gi|170751878|ref|YP_001758138.1| urea ABC transporter, permease protein UrtC [Methylobacterium
           radiotolerans JCM 2831]
 gi|170658400|gb|ACB27455.1| urea ABC transporter, permease protein UrtC [Methylobacterium
           radiotolerans JCM 2831]
          Length = 390

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 53/362 (14%), Positives = 109/362 (30%), Gaps = 36/362 (9%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           N + K +  L+++    + L +       +  ++  + L Y   A GL I  G  G+LSL
Sbjct: 17  NPFMKPVEWLSLLLLAGVILVVLPLVLDGFRLNLVGKYLTYAFVALGLVICWGYAGILSL 76

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL- 127
              + + +G Y   +       SI      S            + +L +         L 
Sbjct: 77  GQGVFFGLGGYCMAMYLKLEASSIENTKIQSTPGIPDFMDWNQITALPWFWQPFKSLPLT 136

Query: 128 ----IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT-----------------VRSL 166
               +   +   +LI +        G Y A     +                    +  L
Sbjct: 137 LILAVAVPVLFAMLISFAMFKRRVGGTYFAIITQAIAAILTILIVGQQGYTGGINGITDL 196

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                +       ++ +Y+V  G+         +++++ +      +RD +        +
Sbjct: 197 RTLHGWDIRTDHAKVILYFVNGGLLIACILAAQYVKKSKLGRILVAMRDKEDRVRFSGYS 256

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +   K+ AF  ++    + GA F      +SP       +I ++    +GG  SL     
Sbjct: 257 VAGFKVFAFCFAAGLAAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAVGGRLSLFGAVW 316

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
            T ++                    F  SF       +      V+L   + L  +    
Sbjct: 317 GTLLVNWAKT--------------SFSESFPDLWLFGLGALFIAVVLAFPNGLAGIWREH 362

Query: 347 NF 348
             
Sbjct: 363 IE 364


>gi|167035888|ref|YP_001671119.1| urea ABC transporter permease UrtB [Pseudomonas putida GB-1]
 gi|166862376|gb|ABZ00784.1| urea ABC transporter, permease protein UrtB [Pseudomonas putida
           GB-1]
          Length = 495

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 222 ITFGLLGVINMAHGEMLMLGAYSTYMVQVLLQRYAPGAIEFYPLIALPVAFAVSAGVGMA 281

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         I +      +  +  + +         +
Sbjct: 282 LER--TVIRHLYGRPLETLLATWGISLILIQAIRLLFGAQNVEVSNPAWLSGGIQLLPNL 339

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++     +     L L RT +    R +  N+        +     + AF +
Sbjct: 340 VLPYNRLVIIGFALAVVLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVSTGRVDMLAFGL 399

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    +L
Sbjct: 400 GSGIAGLGGV--ALSQVGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSLWAAFGLGIANKL 457

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 458 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 492


>gi|116692728|ref|YP_838261.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
 gi|116650728|gb|ABK11368.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 389

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 92/334 (27%), Gaps = 36/334 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI------- 83
                  +  ++  + L Y   A GL I  G  G+LSL   + + +G Y+  +       
Sbjct: 50  FPLALDTFRLNLMGKYLTYAFVAIGLVIAWGYGGVLSLGQGVFFGLGGYAMAMFLKLEAS 109

Query: 84  -----LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
                           +                          +    L     +     
Sbjct: 110 DPAATHTQTTPGIPDFMDWNQLTALPTWWKPFHSLPFSILAVLVVPTALAFVIGYAMFKR 169

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLL 188
           +   +        VA  L  L    +                 +       ++ +Y+V  
Sbjct: 170 RVGGVYFAIITQAVALILSVLIIGQQGYTGGVNGITDLRTLLGWDIRTDHAKLVLYFVNA 229

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +   +  +  W++R+ +      +RD +         +   K+ AF +++    + GA 
Sbjct: 230 TLLIGALLVGRWVQRSKLGTLLLAMRDKEDRVRFSGYDVAMFKVFAFCLAAMLAAIGGAM 289

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           F      +SP       +I ++    +GG  SL        ++                 
Sbjct: 290 FTLQVGFMSPSFVGIVPSIEMVIYAAIGGRMSLVGAVYGAILVNLGKSW----------- 338

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              F  SF      LM      V+++  + L  L
Sbjct: 339 ---FSESFPNLWLYLMAAMFIGVVMVFPNGLAGL 369


>gi|107026088|ref|YP_623599.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054]
 gi|105895462|gb|ABF78626.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia cenocepacia AU 1054]
          Length = 389

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 92/334 (27%), Gaps = 36/334 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI------- 83
                  +  ++  + L Y   A GL I  G  G+LSL   + + +G Y+  +       
Sbjct: 50  FPLALDTFRLNLMGKYLTYAFVAIGLVIAWGYGGVLSLGQGVFFGLGGYAMAMFLKLEAS 109

Query: 84  -----LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
                           +                          +    L     +     
Sbjct: 110 DPAATHTQTTPGIPDFMDWNQLTALPTWWKPFHSLPFSILAVLVVPTVLAFVIGYAMFKR 169

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLL 188
           +   +        VA  L  L    +                 +       ++ +Y+V  
Sbjct: 170 RVGGVYFAIITQAVALILSVLIIGQQGYTGGVNGITDLRTLLGWDIRTDHAKLVLYFVNA 229

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +   +  +  W++R+ +      +RD +         +   K+ AF +++    + GA 
Sbjct: 230 TLLIGALLVGRWVQRSKLGTLLLAMRDKEDRVRFSGYDVAMFKVFAFCLAAMLAAIGGAM 289

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           F      +SP       +I ++    +GG  SL        ++                 
Sbjct: 290 FTLQVGFMSPSFVGIVPSIEMVIYAAIGGRMSLVGAVYGAILVNLGKSW----------- 338

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              F  SF      LM      V+++  + L  L
Sbjct: 339 ---FSESFPNLWLYLMAAMFIGVVMVFPNGLAGL 369


>gi|158424494|ref|YP_001525786.1| ABC-type branched-chain amino acid transport permease component
           [Azorhizobium caulinodans ORS 571]
 gi|158331383|dbj|BAF88868.1| ABC-type branched-chain amino acid transport permease component
           [Azorhizobium caulinodans ORS 571]
          Length = 329

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 66/327 (20%), Positives = 132/327 (40%), Gaps = 28/327 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L      +++ L   A  +  Y+  + I  LI    A   +++    G++S      + +
Sbjct: 14  LALGAGLVVVALLPLAAGASPYMLGLLISALILAGLALSWALLGNLGGMVSFGHAAFFGV 73

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G+Y+  +L +R G+ + L IP++ +I+    +   LP+L+  G Y A+A L  ++IF+ +
Sbjct: 74  GSYASALLAARLGVPVLLAIPLAGLIATISSLA-MLPALRLSGPYFALAILAYAQIFRIL 132

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
             +   +T G AG+     L  L     +                  Y ++L M  + A 
Sbjct: 133 ATEATWLTGGAAGLQRYPGLPTLFGFNLAERHG-------------SYVLVLAMVVICAI 179

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           I + +RR+ +  A R I +++ A   +       K     +S+   GM GA  A     +
Sbjct: 180 IYVAIRRSHVGIALRAIAESEDATRVVGVNSTLLKTWMLMLSAFIAGMFGALNAHIIGFL 239

Query: 257 SPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            PD  F    +++ I   + GG  ++        ++    ++                  
Sbjct: 240 EPDYAFSGIWSVMPIIAAVFGGYRTVLGPVLGAIVIYMFDQVVA-------------KSL 286

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
             + H  L+ I L +++L+  + L  L
Sbjct: 287 IPVGHQILLGILLAIMVLVAPNGLAGL 313


>gi|284046345|ref|YP_003396685.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283950566|gb|ADB53310.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 342

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 45/336 (13%), Positives = 109/336 (32%), Gaps = 24/336 (7%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +   +  V  L+L    G     +   +  +    + + A GL++V G+L L++    
Sbjct: 31  LGVTLAIVAVIVLVLIAAYGLHDVAQRGVNGLVSGSYFALGAVGLTLVYGTLRLVNFAHG 90

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                GAY   +    +G+ +      + +++ A G++      +      A    ++  
Sbjct: 91  ELLTFGAYMAFLANVTWGVPLIAATLFAIVLTAALGVLTERTMWRPMRARGAGLLQLLLM 150

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                 +            Y    ++        +          +        V++   
Sbjct: 151 TLGLAFVL----------RYGIQMIWGTVPRRLDVDVTDSISFLGLRIGRTELIVVVVGI 200

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
               ++ L LR T++    R + D+               ++ +  ++   G+AG  + A
Sbjct: 201 TTLVAVGLMLRLTSLGRQMRALADDMALAEVTGIDTDRVVVATWIFAAGLAGLAGVLYTA 260

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           +   ++P++  F    +  + VILGG+ +         +L    E    +    +   + 
Sbjct: 261 AIGTLTPNLGFFLLLSLF-AAVILGGIGNAYGALAGGLLLGLAQEWSTLVIDARWKVAVG 319

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
           F               L LV+++R   L   +  + 
Sbjct: 320 FG-------------ILILVLIVRPQGLFGRKERTV 342


>gi|221068860|ref|ZP_03544965.1| inner-membrane translocator [Comamonas testosteroni KF-1]
 gi|220713883|gb|EED69251.1| inner-membrane translocator [Comamonas testosteroni KF-1]
          Length = 320

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 53/289 (18%), Positives = 109/289 (37%), Gaps = 12/289 (4%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L   L            ++  QILI  +FA  L + +G  G+L++     + +GAY+  
Sbjct: 16  ALFWVLMASMYFVLPEHLTLMSQILIMGLFAVSLDMALGYAGILTVGHAAFFGMGAYAAG 75

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +         +  + ++ M+  A G +M    ++       + T+ +  +      +   
Sbjct: 76  LWAKHAWNEPFSGLLIAVMVCAALGYLMSYLVVRGADLTRLMITIGLCVLLGETANRLAG 135

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+   +     G               F ++    +   L +  L+  ++  + 
Sbjct: 136 VTGGSDGLQGIELAPLFGV------------FDFDLWGKTSFIYSLAVVLLAFLVVRRIL 183

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+    A R I D+ K   ++ + +      A+  S+A  G+AGA  A S   +  +   
Sbjct: 184 RSPFGLALRGIHDSSKRMQAIGSPVQSRLRMAYCFSAAIAGLAGALMAHSTQFVGIESLS 243

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            + +  V+ I++LGG   L        + + V E    MN  Y+   + 
Sbjct: 244 INRSAEVLIILVLGGTGHLYGGLIGAIVYMVVHEKFADMNPEYWMFWIG 292


>gi|27376080|ref|NP_767609.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27349219|dbj|BAC46234.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 380

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 46/355 (12%), Positives = 101/355 (28%), Gaps = 36/355 (10%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           N++     L+ ++   +  + +       +  ++  + L Y   A GL I  G  G+LSL
Sbjct: 4   NRFFNRSELIGILVLAVFLVVVLPLSLDVFRLNLVAKYLTYAFVALGLVICWGYGGILSL 63

Query: 69  NCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
              + + +G Y   +                       +                  +  
Sbjct: 64  GQGVFFGLGGYCMAMFLKLEASSVENTKIQSTPGIPDFMDWNQITALPFFWKPFNSLTFT 123

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI--------- 167
                L      +         +            VA  L  L    +            
Sbjct: 124 IAAIILVPGIFALIIGTAMFKRRVGGTYFAIITQAVAAILTILIVGQQGYTGGINGMTDL 183

Query: 168 -RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                +       +I +Y+  +G+ F    I  ++R + +      +R+ +        +
Sbjct: 184 RTLKGWDIRPDHAKIVLYFFEVGLLFACIMIAQFVRHSKLGRILVAMREKEDRVRFSGYS 243

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +   K+ AF +++ F  + GA FA +   +SP       +I ++    +GG  S+     
Sbjct: 244 VANFKIFAFCIAAVFAAIGGAMFALNVGFMSPSFVGIVPSIEMVIYTAVGGRLSILGAIY 303

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            T ++                       +F       +      V+L   + L  
Sbjct: 304 GTLLVNFAKTSLSE--------------TFPELWLFGLGGLFIAVVLAFPNGLAG 344


>gi|27378495|ref|NP_770024.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351643|dbj|BAC48649.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA
           110]
          Length = 360

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 64/339 (18%), Positives = 123/339 (36%), Gaps = 28/339 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A     +L L +    +  ++  +    LI  + A  L  + G  G++SL  +      A
Sbjct: 31  AAWIVAVLLLIMPLIANGFFLIEIFATTLILGIMALSLMFLAGYGGMVSLMQLTIAGFAA 90

Query: 79  YSYVILGSRYG------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           Y   + G             WL +PV+  ++   G + G  +++  G Y  + TL +   
Sbjct: 91  YMVAVFGVSANTNISLGWPWWLAVPVALALATVFGTLGGALAVRTEGIYTIMITLAIGAA 150

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           F     +   I NG  GI      +F G   R+               I  YY++L +  
Sbjct: 151 FYYFTNQNWAIFNGHTGINTVATPHFWGVNWRAD--------------IPFYYIVLAVAA 196

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L    + ++ R     A + +RDN +   +L   +   +++A+A +S    +AG     +
Sbjct: 197 LCYFAVDYISRAPFGLALQGVRDNPRRMAALGFNVNAHRVAAYAFASFVAALAGVLQVWN 256

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
             +ISP        I V+ I ++GG+T          I + +      +   +     +F
Sbjct: 257 YRQISPGSVSVGACIDVLIIAVVGGITRPIGPFIGALIFVLLRTFALDVLIKFGLDGNRF 316

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                     L+ +    ++   S  ++ L        R
Sbjct: 317 R--------LLIGLGFLAIVFWSSDGVIGLWQRWRQSPR 347


>gi|322835573|ref|YP_004215599.1| inner-membrane translocator [Rahnella sp. Y9602]
 gi|321170774|gb|ADW76472.1| inner-membrane translocator [Rahnella sp. Y9602]
          Length = 295

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 61/311 (19%), Positives = 122/311 (39%), Gaps = 19/311 (6%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            +++  +     IY + A  L++  G  GLL+   ++    GAY+  + G+ +GL +W++
Sbjct: 2   SEFLLHILCLAGIYAIIALALNLQAGYAGLLNFGHIVFVGTGAYAVGL-GNNFGLPLWVV 60

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           IP   + +     +M L   +   DY  IATL ++EI +  ++    +T G  GI     
Sbjct: 61  IPAGLLCAIVISALMALLGRQLTADYWGIATLALAEIIRIAVVNEDALTGGAQGI----- 115

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                      +         V        ++L    ++    L +  +    A R +R+
Sbjct: 116 ---------GGLSSPWSTGDTVTDTRIFAIIILLSVIVATLASLRIGASRFGRALRLMRE 166

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
             +    +   + + K  A   S+    +AG   A   D +SPD    SE  ++ S+V++
Sbjct: 167 QPQLAICMGYALPWLKCRALMSSAVMCCLAGMLLAWYTDYVSPDYLLSSETFLIWSMVMI 226

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++  +     ++ G+         Y+  S               +++ L    L R
Sbjct: 227 GGIGNVRGVLLGVLLVEGLYNFIPFAKDYFHISSDLTGALRLGLVGLALLLCL----LTR 282

Query: 336 SHSLLRLRTPS 346
              LL  +  +
Sbjct: 283 PGGLLPEKLRT 293


>gi|319654207|ref|ZP_08008296.1| hypothetical protein HMPREF1013_04916 [Bacillus sp. 2_A_57_CT2]
 gi|317394141|gb|EFV74890.1| hypothetical protein HMPREF1013_04916 [Bacillus sp. 2_A_57_CT2]
          Length = 291

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 50/305 (16%), Positives = 111/305 (36%), Gaps = 22/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G LG++++     +  GA+  V++ S +   +WL    
Sbjct: 6   LINGITLGSIYAIVALGFTLVFGVLGIINMAHGEIFMFGAFIGVVVTSTFKGPLWLAFMA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++ A G ++   +L+   +   ++ L        + I  + +++   G         
Sbjct: 66  AILVTAAMGYLLERFALRPLRNKQGVSHLAPLISTIGVSILLENLSHHIFGPGNHP---- 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                R+      F    +   +    + +    L  ++  WL +T    A R   +N +
Sbjct: 122 ----FRASFAEISFQIGSITVYLVQIVIFIISVLLMYALSFWLGKTKAGKALRATAENLE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +         ++SA  G+AG     + + ++P M   S  +  ++I+ILGGM
Sbjct: 178 TASLLGVDVKRTITMTVIIASAMGGIAGILVGMAFNSVTPQM-GLSIGLKGLAIIILGGM 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        IL              +   + F     +             +L+R   
Sbjct: 237 GNVKGAMAGGLILGLAETFVVVYGNSGYKDAIAFAAIIVI-------------LLIRPQG 283

Query: 339 LLRLR 343
           L   +
Sbjct: 284 LFGQK 288


>gi|307321316|ref|ZP_07600716.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|306893044|gb|EFN23830.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
          Length = 333

 Score = 79.9 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 53/325 (16%), Positives = 112/325 (34%), Gaps = 27/325 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
                ++L L            ++  +I    +    L +V G  G+ +L     +  GA
Sbjct: 22  LAGLTVILVLAGIGYLFFPNNLALLTRITAIALLVLSLDLVTGYCGVATLGHAALFGSGA 81

Query: 79  YSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           Y+  I    +      L++    +     G+  G+  L+  G    + ++ +  +F    
Sbjct: 82  YAAGIAAVHFGITDPLLMLAAGILGGALAGLACGVVILRAHGLPQLVLSIALIHLFHEFA 141

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            K    T G  G+        +G              +F ++    Y   + +  +   +
Sbjct: 142 NKASSWTGGSDGLAGIAPDPLIGL------------FAFDLWGRTAYVFGVVLLAIVFVL 189

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  + R+      R IR++     ++  +   A L  + +S A  G+ GA  A S   + 
Sbjct: 190 LRLVVRSPFGMLCRGIREDPIRIRAMGASPTIALLKMYVISGAVAGVGGALNAVSTQVVG 249

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            D   F+ +   + +++LGG  SL      T + +   +L    N +++           
Sbjct: 250 LDSLSFTLSAESLVMLVLGGTGSLFGALTGTIVFMFFEDLVSAANPFHW----------- 298

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
               T++   L  V+L     L   
Sbjct: 299 ---LTMVGALLIAVVLFAPKGLYGT 320


>gi|311742279|ref|ZP_07716088.1| inner-membrane translocator [Aeromicrobium marinum DSM 15272]
 gi|311313907|gb|EFQ83815.1| inner-membrane translocator [Aeromicrobium marinum DSM 15272]
          Length = 445

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 54/323 (16%), Positives = 102/323 (31%), Gaps = 30/323 (9%)

Query: 28  LFLGATKSQKYIDSMGIQI---LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
                  S ++I++M   I   LI  + A GLS++ G+  L + +       GA +  + 
Sbjct: 146 AIEAVPFSDRFIEAMVSGIKFGLIVALAALGLSLIFGTTKLTNFSHGELITFGAIATYVA 205

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKP 142
               GL +      +   S   G +      K         IA +I+S  F   L     
Sbjct: 206 NRGLGLPVVFAGIAAVAASALFGYLQDKMLWKPLRNKGVGIIAMMIVSIGFGLFLRNVYQ 265

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
            T G +             ++   +   R    FV        ++         ++  L 
Sbjct: 266 YTFGGS-----------RRSLSEYVSQGRDDYGFVSLAPKEIAIMGIALVTLVVVVTALM 314

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            T +  A R + DN     S    +     S + + +A  G++G   A +       +  
Sbjct: 315 TTRLGKAMRAVSDNPALSASSGMRVDGVISSVWVLGTALTGLSGVLLAVNSQV--NFLMG 372

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F   ++V + V LGG+ ++      + I+  +VE+            +       +    
Sbjct: 373 FRLLLLVFAAVTLGGLGTIWGALVGSMIIGIMVEVGPLFGVPTSIKEVGALVVLILILLV 432

Query: 323 LMVIALFLVILMRSHSLLRLRTP 345
                       R   +L  R  
Sbjct: 433 ------------RPQGILGRRER 443


>gi|254788032|ref|YP_003075461.1| urea ABC transporter permease UrtC [Teredinibacter turnerae T7901]
 gi|237684011|gb|ACR11275.1| urea ABC transporter, permease protein UrtC [Teredinibacter
           turnerae T7901]
          Length = 388

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 51/349 (14%), Positives = 104/349 (29%), Gaps = 33/349 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
           +  L+           Y  ++  + L Y + A  L +V G  G+LSL     +A+G Y+ 
Sbjct: 33  FLNLVMPEGSLLHIPTYTVTLLGKYLCYALLALALDLVWGYCGILSLGHGAFFALGGYAM 92

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +   R      +                 LP      D    A +++  +   +   + 
Sbjct: 93  GMYLMRQIGDRGVYGNPELPDFMVFLNWDKLPWYWHSFDMFWFAMVMVVLVPGLLAFVFG 152

Query: 142 PITNGK-------------------AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
            +                          ++ D  +     +        F  S     + 
Sbjct: 153 WLAFRSRVTGVYLSIITQALTFALMQAFFLNDFGFGGNNGLTDFKEIVGFDVSSDGTRLT 212

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           ++++   +  L+     ++ ++       +IRD +     L   +   KL  F  S+A  
Sbjct: 213 LFFITAIILVLAYIACRFITQSKFGRVMLSIRDAESRTRFLGYRVEHYKLFVFVFSAALA 272

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+AGA F      I+P  F    +I ++  V LGG  +L        ++        G  
Sbjct: 273 GIAGALFVPQVGIINPGEFSPINSIEIVIWVALGGRGTLYGAVIGAVVVNYAKTYFTG-- 330

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                       +F      ++     +        L+ L        +
Sbjct: 331 ------------AFPEIWLFMLGGLFVIATTTLPRGLVGLAEDLMEKRK 367


>gi|56477370|ref|YP_158959.1| ABC transporter permease [Aromatoleum aromaticum EbN1]
 gi|56313413|emb|CAI08058.1| Possible ABC transporter, permease protein precursor [Aromatoleum
           aromaticum EbN1]
          Length = 309

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 54/321 (16%), Positives = 117/321 (36%), Gaps = 29/321 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
              ++ L LG          + ++IL + +FA   ++++G  GLLS           Y+ 
Sbjct: 6   IGWIILLVLGLVAPFLVYPVLVMKILCFSLFACAFNLLLGYTGLLSFGHAAFLGWAGYTC 65

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                  GLS  L +      + A G + G  +++  G Y A+ TL ++++   + +++ 
Sbjct: 66  GYAIKELGLSPELGLLAGTATAAALGFVFGSLAIRRSGIYFAMVTLALAQLMYFLALQF- 124

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
                                ++ + R + F    +   + MYY +L +      +I   
Sbjct: 125 -------------PFTGGEDGLQGVPRGYLFGLVDLSQTMNMYYFVLAVFLGGFWLIDRA 171

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +      + IR+N+    SL   +   KL AF +S+A  G+AGA         S    
Sbjct: 172 IHSPFGQVLKAIRENEPRAISLGYDVDRYKLLAFVLSAALSGLAGATKTLVFQLASLTDV 231

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            +  +  ++ + +LGGM ++        +++ +      +  +                 
Sbjct: 232 HWHMSGEIVLMTLLGGMGTVFGPVVGATVVVSLQNYGAELGQWVS--------------- 276

Query: 322 TLMVIALFLVILMRSHSLLRL 342
            L  +   + +L     ++  
Sbjct: 277 VLTGVIFVICVLAFRRGIVGE 297


>gi|288915943|ref|ZP_06410325.1| ABC transporter related protein [Frankia sp. EUN1f]
 gi|288352572|gb|EFC86767.1| ABC transporter related protein [Frankia sp. EUN1f]
          Length = 913

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 60/303 (19%), Positives = 112/303 (36%), Gaps = 20/303 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
                   L++ +F   + ++ G  G L L       +GA +   L S  G  +      
Sbjct: 323 WVDALRVTLVWSIFLLSVVVLTGYAGQLCLAQFALGGVGALTTSWLISSKGWPLEAAAVT 382

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               + A G++  LP+L+ RG  LAI TL +S +   ++      T G +G+ V+ R   
Sbjct: 383 GVAAATAAGLLFALPALRTRGIELAIVTLSLSAVLHAMVFNSAEFTGGVSGMDVSQR--- 439

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                      F        +      V+L    ++A ++  LRR+    +  TIR  ++
Sbjct: 440 ---------SLFGIGIDSFDHPRRFAIVVLVAFVVTALLVANLRRSKPGLSMITIRTRER 490

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL  ++   KL+AFAV SA  G+AG              F    +++ +++ ++GG+
Sbjct: 491 AAASLGVSVAVTKLTAFAVGSAIAGLAGVLLILGNPVALFSQFDPIGSLMTVTLAVIGGV 550

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +                                 + N        + L L+++   + 
Sbjct: 551 GYIVGAPLGG--------QLSTGGVGTRLGDSFGLGNLNQWLVLFTGVFLILLLIQDPNG 602

Query: 339 LLR 341
           + R
Sbjct: 603 MAR 605



 Score = 41.8 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 81/287 (28%), Gaps = 26/287 (9%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
             + + G+ ++    G+L+L       + A+ Y+ L      S    +   A+ S    +
Sbjct: 18  LSLLSQGIVLIYRGSGVLNLAHGAIAMLAAHIYIALSDAGWASWQAAVITIALSSLMGAV 77

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
           I            + + ++ M  +          I                 T V+S + 
Sbjct: 78  IHNAVLRPMGEASILVKSIAMIAVLLITQAGVTLIFG------------TDATFVQSFLP 125

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                   +        + L    L+  +    R + I  A     +N +A  +L  +  
Sbjct: 126 QAVTRVGGISVPQDRIVLALIALLLTGLLYAVFRWSTIGLAISATAENSEAAAALGWSPH 185

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
                A+A  S   G+AG             +       +  +++    ++S    A   
Sbjct: 186 VIGTVAWASGSGLAGLAGILVGPFTGVDPQTLTLIVIGGLAGALIGG--LSSFPLAALGG 243

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
             +     +                        T+ ++ +  +++ R
Sbjct: 244 FGIGIAQAVIPSYVE------------LQGAAQTVPLVIIIGLLVWR 278


>gi|55378710|ref|YP_136560.1| branched-chain amino acid ABC transporter permease [Haloarcula
           marismortui ATCC 43049]
 gi|55231435|gb|AAV46854.1| branched-chain amino acid ABC transporter permease protein
           [Haloarcula marismortui ATCC 43049]
          Length = 373

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 53/292 (18%), Positives = 114/292 (39%), Gaps = 24/292 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           ++ +I  L  ++  +     + A    +          ++ +FA G  I  G  G +S  
Sbjct: 59  RFGEITGLQLLLLLVAFGGLVTAPLWGQDYLRPLTLGAVWAVFAMGWDIQSGYTGYISFG 118

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                    Y+  +L         +++ +P+S + +   G+ + +PSL+ RG Y ++ T 
Sbjct: 119 HSALSGAAGYTTGLLVLHLNPELSLFVTVPLSILATTVLGLAIAVPSLRLRGPYFSLVTF 178

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           +   +F  +       TNG  GI                         F       YY++
Sbjct: 179 VTVLLFYRLTKALSHWTNGLRGIR---------------------VDVFTYDLTLQYYMV 217

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +      A+ + ++ R+ +      IR+N+ A  +        KL +F +S+  +G+ G 
Sbjct: 218 VVPMLAVAATLTYVGRSDVGTVLVAIRENEDAVSAAGVDPTKFKLWSFVLSAVPMGIGGV 277

Query: 248 FFAASRDRISPDMFKFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
             A     + P  F     +I +I++ ++GGM+S+        + +G+ ++ 
Sbjct: 278 LLAHVNAGVDPQTFVIVDNSIQMIAMAVIGGMSSILGPLGGAFLFVGLRDVF 329


>gi|76801385|ref|YP_326393.1| branched-chain/neutral amino acids ABC transporter permease
           [Natronomonas pharaonis DSM 2160]
 gi|76557250|emb|CAI48825.1| ABC-type transport system permease protein II (probable substrates
           branched-chain/neutral amino acids) 3 [Natronomonas
           pharaonis DSM 2160]
          Length = 347

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 53/318 (16%), Positives = 114/318 (35%), Gaps = 25/318 (7%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
                       +        I+ +FA    I  G  G +S    +     AYS  +L +
Sbjct: 39  PALTAVGLMSGTLLRTLALANIFAIFAMAWDIQSGYTGYISFGHAVLSGAAAYSAALLIT 98

Query: 87  R--YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                ++ WLL PV+ +++   G+I+   +++  G Y ++ TL+   +F      +   T
Sbjct: 99  HVVPDINPWLLFPVAVLMALVVGLILAATTIRLSGPYFSLITLVAGLLFYRSTRTFSQWT 158

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G+ G+ +                             + + + +    L A+ +L + R+
Sbjct: 159 QGEQGLLIGRLPVLPPFD----------GIFSAFDAEWRFIITVVPMLLIAAALLVISRS 208

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            +      IR+N+ A  S        K+ +F +SS  +G+ G   A     ++P      
Sbjct: 209 NVGTVLVAIRENEAAVESAGIDTNKFKVWSFVLSSIPMGIGGFLLAFFDGSVNPTDIVLL 268

Query: 265 EN-IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  +  I++ ++GGM S+        + +G+               +             
Sbjct: 269 DRSVEFIAMAVIGGMGSILGPLAGAFLFVGL------------RDAILPAFLGGTERWLA 316

Query: 324 MVIALFLVILMRSHSLLR 341
           + + + +VI++    L R
Sbjct: 317 LWVIILVVIVLARDGLFR 334


>gi|329113959|ref|ZP_08242726.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Acetobacter pomorum DM001]
 gi|326696706|gb|EGE48380.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Acetobacter pomorum DM001]
          Length = 549

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 99/306 (32%), Gaps = 18/306 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++ A GL+I  G +G++++       IGAY+  ++      ++  L PVS ++
Sbjct: 261 LSYGSVLLLAATGLAITFGVMGVINMAHGELMMIGAYTTWLVQQGIRATVPWLEPVSLLV 320

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +      +           L     +     + +L  W      +  I        +   
Sbjct: 321 AIPVAFCVCGLLGILIERGL--IRFLYGRPLETLLATWGLSLILQQAIRSIFGPTNIAVI 378

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             + +    +    V   +    + +    +  +++L +R+T++    R +  N++    
Sbjct: 379 TPAWLSG-SWMLGSVDITLNRLAIFVFAFLVLGALMLVMRKTSLGLEMRAVTQNRRMAAL 437

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +          AF + +   G+AG   A S+          S  I    +V+ GG+ +L 
Sbjct: 438 MGIRTPRVDALAFGLGAGLAGLAGV--AVSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLW 495

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L    ++                          +++ + L I      +  +
Sbjct: 496 GTLAAAMTLGMGGKILEPTIGAVSAK-------------IAILVLVILYIQRHPRGMFPV 542

Query: 343 RTPSNF 348
           R     
Sbjct: 543 RGRGVE 548


>gi|328545423|ref|YP_004305532.1| ABC transporter permease [polymorphum gilvum SL003B-26A1]
 gi|326415165|gb|ADZ72228.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1]
          Length = 317

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 114/286 (39%), Gaps = 18/286 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++   L+            +     ++LI  +FA  L++++    ++S      + +GAY
Sbjct: 14  LLVLALIGAEAANRFGGAGLSLALSEMLILALFASSLNLLMTYGHMVSFGHAAYFGLGAY 73

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
            + +  +R G+ +   + +  +++   G++ G   ++    Y A+ TL  ++I   +L +
Sbjct: 74  GFTLAVTRAGVPVEAALVLGPLVATLGGIVFGALCVRLTEIYFAMLTLACAQITYTVLFQ 133

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W   T G  GI                         F + E     ++L +  +  +I+ 
Sbjct: 134 WYGFTGGDTGITGFMPAR------------------FGLSEANFTSLVLAVLVVGLAILA 175

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  + +  + R++  ++    +L       +L+ FA+S+ F G+AG  +A  +    PD
Sbjct: 176 RIINSPLGLSIRSVGQDRWRAEALGLAPRRVQLTVFAISAFFAGVAGTLYAVFQGAAFPD 235

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
                  +  + +V++GG+ S         +   +      +  ++
Sbjct: 236 YAGLGFTLDALIMVVIGGLRSFWGGVVGAIVFSQLRHWAPLVTNHW 281


>gi|257870223|ref|ZP_05649876.1| branched-chain amino acid ABC transporter [Enterococcus gallinarum
           EG2]
 gi|257804387|gb|EEV33209.1| branched-chain amino acid ABC transporter [Enterococcus gallinarum
           EG2]
          Length = 292

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 103/303 (33%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y IG++    L +++ L  +  + +
Sbjct: 8   LINGLFLGSIYALLALGYTMVYGIIKLINFAHGEVYMIGSFIGYFLINQWNLGFFPALFI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S + S A G+ +   + +   +   I+ LI +     +L                     
Sbjct: 68  SMIASAALGVTIEFLAYRPLRNSTRISALITAIGVSYLLQNVMIFFFSPD---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    +   FV        +L     L   + L +++T +  A R +  +  
Sbjct: 118 -VRPFPQAIARKTYSIGFVEVSNIQLLILAVSLALMILLQLIVKKTRMGKAMRAVSVDAD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA     G       + I P M      +      +LGG+
Sbjct: 177 AARLMGINVNRTISFTFALGSALAAAGGMLIGLYYNSIDPTM-GVVPGLKSFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +  +   +              F+     L+ + L +++L+R   
Sbjct: 236 GIIPGAALGGFVIGLIETVATALG-------------FSDYKDALVYVILIIILLVRPAG 282

Query: 339 LLR 341
           +L 
Sbjct: 283 ILG 285


>gi|257867466|ref|ZP_05647119.1| branched-chain amino acid ABC transporter [Enterococcus
           casseliflavus EC30]
 gi|257873795|ref|ZP_05653448.1| branched-chain amino acid ABC transporter [Enterococcus
           casseliflavus EC10]
 gi|257877545|ref|ZP_05657198.1| branched-chain amino acid ABC transporter [Enterococcus
           casseliflavus EC20]
 gi|257801522|gb|EEV30452.1| branched-chain amino acid ABC transporter [Enterococcus
           casseliflavus EC30]
 gi|257807959|gb|EEV36781.1| branched-chain amino acid ABC transporter [Enterococcus
           casseliflavus EC10]
 gi|257811711|gb|EEV40531.1| branched-chain amino acid ABC transporter [Enterococcus
           casseliflavus EC20]
          Length = 292

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 99/303 (32%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y IG++    L +++ L  +  + +
Sbjct: 8   LINGLFLGSIYALLALGYTMVYGIIKLINFAHGEVYMIGSFIGYFLINQWQLGFFPALFI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S + S A G+ +   + +   +   I+ LI +      L                     
Sbjct: 68  SMIASAALGVTIEFLAYRPLRNSTRISALITAIGVSYFLQNVMIFFFSAN---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    +   FV        +L     L   + L +++T +  A R +  +  
Sbjct: 118 -VRPFPQAIERQTYSIGFVQVSNVQLLILAVSVTLMILLQLIVKKTRMGKAMRAVSVDAD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA     G       + I          +      +LGG+
Sbjct: 177 AARLMGINVNRTISFTFALGSALAAAGGMLIGLYYNSID-PSMGVVPGLKSFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  V      +              F+     L+ + L +++L+R   
Sbjct: 236 GIIPGAALGGFVIGLVETAATALG-------------FSDYKDALVYVILIIILLVRPAG 282

Query: 339 LLR 341
           +L 
Sbjct: 283 ILG 285


>gi|110667577|ref|YP_657388.1| ABC-type branched-chain amino acid transport system, permease
           protein I [Haloquadratum walsbyi DSM 16790]
 gi|109625324|emb|CAJ51746.1| ABC-type branched-chain amino acid transport system, permease
           protein I [Haloquadratum walsbyi DSM 16790]
          Length = 333

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 103/325 (31%), Gaps = 24/325 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS-----------------Y 81
           + +   Q  IYV+ A GLSI++G+L  ++      Y IG Y+                 +
Sbjct: 11  LLNGLQQGAIYVLLAVGLSIILGTLKFVNFAHGALYVIGTYAGLLIALDVSLTSGKLREW 70

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                   L  +  +    ++    G+ M     +   D      ++++     ++ +  
Sbjct: 71  GFSTIGLDLGFFAALVFVPIVVFIIGVTMERFLAQSFYDRPDTDQILVTFGIAIVVQELF 130

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI--YEIFMYYVLLGMCFLSASIIL 199
            +  G   +        L       I      +  +I  +  +  +V+     L   +  
Sbjct: 131 RVLFGSNSLPFNQPENVLAIGGFGGIPVSGPITLPIIGGFPRWRLWVIAITAVLVGIVYA 190

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  T      R    + +    L   I    L  F + +A  G+AG         +   
Sbjct: 191 LVEYTDFGLIVRAGTRDAEMVRLLGVKIDRPYLVVFGIGAALAGVAGVVGGPL--SVVNP 248

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
               +  +     V++GG+ S++       ++  V     G+          F  +F+  
Sbjct: 249 TVGTNILVPAFLTVVIGGIGSITGAVAGGLLIGLVQATLIGLPSVTLG---AFTLNFSPW 305

Query: 320 HTTLMVIALFLVILMRSHSLLRLRT 344
               +     LV+L+R   +L    
Sbjct: 306 SQVGLYAIAALVLLLRPQGILGSEE 330


>gi|91781257|ref|YP_556464.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693917|gb|ABE37114.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 327

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 53/299 (17%), Positives = 100/299 (33%), Gaps = 11/299 (3%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 Y+     ++LI  + A    +V G  G+LS    + +  G Y   +L   YG++
Sbjct: 22  PFVLSDYLTVFATKVLILSLLALSFDLVWGYAGILSFGQALFFGGGGYVAAVLARDYGVN 81

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             ++   +A+++GA    +    +        I   + +        +         G  
Sbjct: 82  AAIVALPAAILAGALLSAVVAGVVVLGKSATQIFIALGTMTASYAAYRLAISWYYLGGQN 141

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
               L  L T         RF           YY+ L +  +  ++  +L R+ +  A  
Sbjct: 142 GISSLPLLKTGSYEFDEGPRF-----------YYLALALLIVIYAVSRFLVRSQLGLALT 190

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            IR+N +    L   +   K + F  S A  G+AG   A     I P       +   + 
Sbjct: 191 GIRENVRRMVFLGYRVNVFKAAVFVFSGAIAGLAGGLTAFHEGFIGPGSLGTVLSTQAVL 250

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
             +LGG  +L        I+  +           +  LL       + +    +I+L +
Sbjct: 251 YSLLGGSGTLIGAVFGAVIIETLGFGLSDRLPELWPVLLGIILLLLIIYRPQGLISLIV 309


>gi|220904339|ref|YP_002479651.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868638|gb|ACL48973.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 297

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 91/303 (30%), Gaps = 22/303 (7%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +      +Y + A G ++V G L L++        +GAY        +G    +   VS 
Sbjct: 12  NALTLGSLYALIAIGYTMVYGILRLINFAHGDILMVGAYFVFFGTFAFGWPWGVAAVVSV 71

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
             +   G+ +   + +   D   I+ LI +      +     +                 
Sbjct: 72  AGASLLGVFIERVAYRPLRDAPRISALISAIAVSFFIESLAVVVF----------TGQPR 121

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             ++       +    +       +V L    L   ++  + RT    A R I  + +  
Sbjct: 122 PVLQPEWLVAEWQIGSLRILPLTAFVPLMTIVLVGFLLYVVYRTKPGLAMRAISKDIETT 181

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             L   +       F + SA    +G  +A    ++ P M      +      + GG+ S
Sbjct: 182 RLLGVRVDNIIALTFCIGSALAAASGIMWALRYPQVHPYM-GIMPGLKAFIAAVFGGIGS 240

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +         L  V  +            + F    +        + L LV+  +   LL
Sbjct: 241 IQGAVIGGVALGFVEIMT-----------VAFMPELSGYRDAFAFVLLVLVLFYKPTGLL 289

Query: 341 RLR 343
             R
Sbjct: 290 GER 292


>gi|207723555|ref|YP_002253954.1| amino acid transport system permease lipoprotein [Ralstonia
           solanacearum MolK2]
 gi|206588756|emb|CAQ35719.1| amino acid transport system permease lipoprotein [Ralstonia
           solanacearum MolK2]
          Length = 440

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/333 (13%), Positives = 109/333 (32%), Gaps = 17/333 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +   L      L+ + L     + +  ++  Q+ I ++FA   ++++G  G+LS  
Sbjct: 23  RPFNLARWLIWGSTALVMIVLPLIWPRGFAITLLSQMGIMIIFALSYNMLLGQSGMLSFG 82

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
             +   +GA+  V L +R G    L I     ++          +L              
Sbjct: 83  HAVYAGLGAFMAVHLLNRIGAVQALGIGGPLAVALLPLAGGLGGALFGVLFGYVTTRRAG 142

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +      L   + +    + +   D     G    +                 +YY++  
Sbjct: 143 TTFSMITLGIGEMVF--ASALMFPDFFGGEGGVSTNRSIGEPLLGISFGPARQVYYLIAA 200

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
            C +S +++    +T +      +RDN +    +  +    +     +S+ F G+AGA  
Sbjct: 201 WCLISMALMYAWTQTPLGRIANAVRDNPERVEFIGYSTQRVRCLVVILSAFFAGIAGALS 260

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + + ++ +      +  V+    +GGM +         + +       G+   +    
Sbjct: 261 CINFEIVTAENVSAVRSGAVLLAAFIGGMGTFFGPIIGAVLTVFFTVALSGITKAW---- 316

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         + +   L+++     +  L
Sbjct: 317 -----------LLYLGLFFVLMVMYAPGGIASL 338


>gi|291279323|ref|YP_003496158.1| branched-chain amino acid ABC transporter permease [Deferribacter
           desulfuricans SSM1]
 gi|290754025|dbj|BAI80402.1| branched-chain amino acid ABC transporter, permease [Deferribacter
           desulfuricans SSM1]
          Length = 281

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 102/267 (38%), Gaps = 22/267 (8%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y  S+ I + I V+ +  L+++ G  G +SL     Y  GAY+  ++          +I 
Sbjct: 3   YFYSLLILVGISVILSLSLNLISGYCGQISLGHAAFYGTGAYAAAMIAQLGINIPISIIF 62

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            + +                               F ++ +K   +     G+      +
Sbjct: 63  GAIVAGVF----------------------GFIVGFSSLRVKDDFLAITTMGVNFLFIGF 100

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                            +  + ++    V+  +        + ++   +  A+  I D++
Sbjct: 101 VRQQEWLGGEMGIYSIPATGLTKMQYSLVVTIVAIFVIMFSITIKNRWMGFAFEAIADDE 160

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A  ++       KL+AF + +   G+AG  +A     I PD F F+E+I ++S+V++GG
Sbjct: 161 DAAETVAINTSKYKLTAFILGTMLAGLAGGLYAFDIRYIGPDSFGFTESISILSMVVVGG 220

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFY 304
           + S+  +  A+ IL  + +    ++ Y
Sbjct: 221 IGSVWGVVTASIILSLLPQWLQFISDY 247


>gi|260223446|emb|CBA34021.1| hypothetical protein Csp_B21950 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 367

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 101/347 (29%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I+    V    L+     A     +  ++  +I+ Y + A  + ++ G  G+LSL   + 
Sbjct: 26  IVLCALVPVLNLMVPAGSALHLSDFAVALTAKIMCYSICALAMGLIWGYTGILSLGHGLF 85

Query: 74  YAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           +A+G Y+  +                        W  +P    +SG+ G  + L      
Sbjct: 86  FALGGYAMGMYLMRQIGLDGNYKSNLPDFMVFLDWKELPWHWALSGSFGATLFLVVAVPG 145

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
                          + +           A + +  R             F R     + 
Sbjct: 146 LVAFVFGYFAFRSRIKGVYFSIITQAMTFAAMLLFFRNETGFGGNNGFTDFKRILDIPIA 205

Query: 179 YEIFMYYVLL---GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  + +       L   +  WL  +      + +RD +        + +  KL+ +
Sbjct: 206 TTSMRMTLFVMTSVTLLLFFLLARWLVGSKFGRVLQAVRDAESRVMFSGYSTLGYKLTIW 265

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            +S+   G+AGA +      I+P     + +I +     +GG  +L        ++ G  
Sbjct: 266 TISAMMCGVAGALYVPQVGIINPSEMSPANSIEIAIWAAVGGRATLIGPIVGAFLVNGAK 325

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                              ++       +      V L     ++ L
Sbjct: 326 SWLT--------------VTYPEFWLYFLGALFIGVTLFLPDGVVGL 358


>gi|254441473|ref|ZP_05054966.1| amino acid or sugar ABC transport system, permease protein,
           putative [Octadecabacter antarcticus 307]
 gi|198251551|gb|EDY75866.1| amino acid or sugar ABC transport system, permease protein,
           putative [Octadecabacter antarcticus 307]
          Length = 410

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 47/367 (12%), Positives = 106/367 (28%), Gaps = 37/367 (10%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
            +   L +  +    +         S  ++ ++G + L   + A  + +V G  G+LSL 
Sbjct: 14  WFLAGLAIFTLGVTFMSEAAGVDIISTSFLKTLG-KTLCLCLVAIAMDVVWGYCGILSLG 72

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLL-----------------IPVSAMISGACGMIMGL 112
               + IG Y+  +          +                     S +           
Sbjct: 73  HFAFFGIGGYAIGMWLMYARTEGIVATSLESAALPPTPQEITDAIGSQIFGVVGSSEFPA 132

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
                    L +  ++       ++  W    +   G+Y++     +   +         
Sbjct: 133 IWAFSHSLPLQLLAVVFVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLYFFQNDT 192

Query: 173 PS------------------SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                               S  +  ++ ++       +   +  ++      +  R IR
Sbjct: 193 GLRGNNGLSGLQNVPGLEARSQAVVSLWFFWASAVALGMGYVLFAYIVSGKFGSVIRAIR 252

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           DN+     L   +   KL  F  ++   G+AGA +      I+P       +I +   V 
Sbjct: 253 DNEARVRFLGYHVEQYKLFIFTCTAMVAGIAGALYYPQAGIINPAEIAPIASIYLAVWVA 312

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +GG   L       A++  +     G +    N    +   +      L+ ++  LV L 
Sbjct: 313 IGGRGRLYGAVIGAALVSLMSSWFTGGSAPNINLGF-YVIKWTDWWLVLLGVSFVLVTLY 371

Query: 335 RSHSLLR 341
               +  
Sbjct: 372 FPKGIGG 378


>gi|160895709|ref|YP_001561291.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160361293|gb|ABX32906.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 287

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 83/305 (27%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A GL++V G L + +      Y IGA+        +    W  +  
Sbjct: 8   VLNGLTLGGIYGLVALGLTLVYGILHVPNFAHGGFYMIGAFVAFQAMVAWSWGYWAAMLT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+     G++              +   I S      L        G     +      
Sbjct: 68  AAVAVAVLGIVSERLIFHPLRKASPLHPKIASIGLLLFLEAGAQALWGADFQRMPTPYTS 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +                 +        ++     L  ++ L+L RT        +  N++
Sbjct: 128 IVEM------------GGITAPAQRLLIIGAAFALMVALHLFLTRTITGATIIAMAQNRE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        +  FA+S     +A   +A     +               I+ILGGM
Sbjct: 176 GASMVGIDANRVSMLTFAISGVLAAVAATLYAP--INLVYPAMGHLVITKAFVIIILGGM 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+                               +  + L +++ +R   
Sbjct: 234 GSIPGAVLGGLIIGFAESFGAYYIS-------------TDYKDIIAFVLLVVILSLRPQG 280

Query: 339 LLRLR 343
           L   R
Sbjct: 281 LFAKR 285


>gi|170686393|ref|ZP_02877614.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0465]
 gi|227815244|ref|YP_002815253.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. CDC 684]
 gi|229601747|ref|YP_002866339.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0248]
 gi|170669469|gb|EDT20211.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0465]
 gi|227005640|gb|ACP15383.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. CDC 684]
 gi|229266155|gb|ACQ47792.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0248]
          Length = 317

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 59/322 (18%), Positives = 129/322 (40%), Gaps = 31/322 (9%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY   +
Sbjct: 2   LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61

Query: 84  LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           L  R      + ++ I  + +IS     I+GL SL+ +  + A+ TL +S++F  +  KW
Sbjct: 62  LFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T+G  G        F                        +YYV L    +   ++  
Sbjct: 122 RGLTHGGDGFTFGVPDVFRDRF-------------------TLYYVTLICLLIIFVLLRL 162

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++  +
Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVNTTV 222

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F     +  + + ++GG+ +L            +       +  Y+ S L  +     R 
Sbjct: 223 FSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIFERW 273

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
           T ++ +   +V+L+    L+  
Sbjct: 274 TIILGLLYIIVLLVFPKGLVGT 295


>gi|146339850|ref|YP_001204898.1| high-affinity branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. ORS278]
 gi|146192656|emb|CAL76661.1| high-affinity branched-chain amino acid ABC transporter (permease
           protein) [Bradyrhizobium sp. ORS278]
          Length = 305

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 85/306 (27%), Gaps = 16/306 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   IY + A G ++V G +G+++      + IG +  +I            +PV
Sbjct: 8   LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDVFMIGGFIALISFLVLVSIGLTAVPV 67

Query: 99  SAMISGACGMIMGLPSLKF--RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +I     M +         R  Y  +          + +     +TN       A   
Sbjct: 68  ILLIVLLVSMAITALYGWTIERIAYRPLRHSFRLAPMLSAIGMSFVLTNFSQVSQGARVK 127

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                               V        V++    L       + RT +    R    +
Sbjct: 128 PVPPIITGGYTLHEGDSGFVVQLSNIQIVVVVTTIVLLGLFTWLVSRTRLGRDMRACEQD 187

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           Q     L   +       F + +A   +AG  +      +   M  F   I   +  +LG
Sbjct: 188 QTMAALLGVDVDRTISMTFVIGAALAAVAGMMYLLYYGLVDFFM-GFVAGIKAFTAAVLG 246

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ SL         +  +           +  +  F               L +V++   
Sbjct: 247 GIGSLPGAMLGGLAIGLIETFWSAYFSVEYKDVAAFS-------------ILIVVLIFLP 293

Query: 337 HSLLRL 342
             LL  
Sbjct: 294 TGLLGR 299


>gi|187477448|ref|YP_785472.1| ABC transporter permease [Bordetella avium 197N]
 gi|115422034|emb|CAJ48557.1| ABC transporter, permease protein [Bordetella avium 197N]
          Length = 290

 Score = 79.9 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/315 (12%), Positives = 92/315 (29%), Gaps = 26/315 (8%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
            L        + +      +Y + A GL+++ G L +++     A  +  Y+  +L  R 
Sbjct: 1   VLDPAILFSSVLNGLTTGAVYALIALGLTLIYGVLHIINFAQGAALMVALYAVYLLKERL 60

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            +  +  +P+        G  +    +           L+++     ++     +     
Sbjct: 61  NIDPYAALPLVVAGMFVLGYALQRYVINRASHGKDENILLVTLGLAIVMENLALVWFKSD 120

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                        T+ +            +  +       G   ++A +   +R T +  
Sbjct: 121 -----------TRTIETAYTLSTVEIGPAMIALPKIIAFCGALAVAAVLFWIIRSTDLGR 169

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           A R +   ++    +   +      +F +  A +G A  F   +              ++
Sbjct: 170 AIRAVSKEKQGAKLMGIDVEKVYALSFGIGMACLGAAACFLLPAYYV--NPQVGSGFVLV 227

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
             +IV+LGGM S         ++  V  +           +              +    
Sbjct: 228 AFTIVVLGGMGSFVGALVGGLLIGVVESIGGLFLGDSLGQMG-------------IFAIF 274

Query: 329 FLVILMRSHSLLRLR 343
             V+L R   L   R
Sbjct: 275 IAVLLFRPQGLFGAR 289


>gi|182439315|ref|YP_001827034.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326779967|ref|ZP_08239232.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|178467831|dbj|BAG22351.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326660300|gb|EGE45146.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 309

 Score = 79.5 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 91/305 (29%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      + IG +  + +         L+  +
Sbjct: 8   LANGLILGAMYGLIAIGYTMVYGIIQLINFAHGEIFMIGGFGALTVYLGLPSGFSLIAAI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             MI G     + +     R  Y  +            LI    ++              
Sbjct: 68  PLMIVGGVIAAVAISMAAERFAYRPLRG----GPRLAPLITAIGLSLALQQAVWMWYPDA 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        F       +    +VL+       ++  ++ +T      +    +  
Sbjct: 124 TKDRSFPQFEGEAFDVLGATIQRGDIFVLVVAPLCMLALGFFVSKTRAGRGMQATSQDPD 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        + AFA+ +AF  +A   +     +I   M  F   +   +  +LGG+
Sbjct: 184 TAKLMGINTDRIIVMAFAIGAAFAAVAAVAYGLKNGQIGFRM-GFIMGLKAFTAAVLGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L     L  G         L                 L +V+L+R   
Sbjct: 243 GNIYGAMLGGIVLGVAEALATGYMSEVPGMEL---FGGGAWKDVWAFALLIIVLLVRPQG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|146340379|ref|YP_001205427.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. ORS278]
 gi|146193185|emb|CAL77197.1| putative branched-chain amino acid ABC transporter, permease
           protein [Bradyrhizobium sp. ORS278]
          Length = 351

 Score = 79.5 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 72/316 (22%), Positives = 127/316 (40%), Gaps = 16/316 (5%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
            +    S   +D++    L   + A GL+++ G  G +SL      A+GAY+   L  R 
Sbjct: 34  VVPWIGSDYLMDAVLTPFLALALAAVGLNVLTGYAGQVSLGSAAFLAVGAYAAYNLNLRL 93

Query: 89  GLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
            +   L  I ++  I+ A G++ GLPSL+ RG YLA++TL      Q  L K+   +N  
Sbjct: 94  PVLPLLADIVLAGGIAAAMGIVFGLPSLRLRGFYLAVSTLAAQFFVQWALTKFGWFSNDN 153

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
           A   +                  R            Y   L +  ++ ++   L  +   
Sbjct: 154 ASGVIDAP-------------VIRVGGLTFTSATGRYVFSLTIVVVATALTARLLASQTG 200

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSEN 266
             +  +RD++ A   +   ++  KL AF VSS  IG+AG  +A A    + P  F    +
Sbjct: 201 RNFIAVRDHEVAAKVIGVPLLRTKLLAFGVSSFLIGVAGVLWAFAYLRTVEPAGFNLDRS 260

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             ++ I+I+GG+ SL       A ++    L   +      S+        M    ++  
Sbjct: 261 FQILFIIIIGGLASLRGAFIGAAFIVVFPLLLSRLGAAVLGSVFDRGV-LEMSQRIVIGA 319

Query: 327 ALFLVILMRSHSLLRL 342
            +   ++     L+ L
Sbjct: 320 LIIAFLIAEPRGLVAL 335


>gi|187920438|ref|YP_001889470.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
 gi|187718876|gb|ACD20099.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
          Length = 356

 Score = 79.5 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 48/307 (15%), Positives = 91/307 (29%), Gaps = 2/307 (0%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L                    L++   A GL+ + G  G+LS      + +  Y+Y I  
Sbjct: 22  LVALCLPLVVDANTSGNLAYCLLWAFSALGLAAMWGYGGILSFGQTAFFGLSGYTYGIFT 81

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI-MSEIFQNILIKWKPIT 144
             YG + +              +  GL         +    +  ++     +L  +   T
Sbjct: 82  LNYGDTWFESWLGLGAGIVVSIVAAGLIGYMVFYGRIKGVFIGIVTLSVTLVLETFMSQT 141

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY-EIFMYYVLLGMCFLSASIILWLRR 203
            G        RL               +P   +    +  YY++L +     +I+  L  
Sbjct: 142 AGPQWAIGEARLNGYNGMGGMPQLTIPWPGGPLTLENVSFYYLVLLLLIAVYAIMRKLLD 201

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
                    IR+N +    L   I   +L  F +     G++GA +      I+P     
Sbjct: 202 GTFGLTLIAIRENPQRAEMLGVDIRRHQLMVFVLGCTLGGLSGALYTIWGSYITPSTMGL 261

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +   + +  V   G  S+      TA L+ + +        Y   LL       +     
Sbjct: 262 TAAAMPVIWVATSGRKSIGGTIIGTAFLVWLSQNLAVYGSQYALILLGAILLIVVLAAPE 321

Query: 324 MVIALFL 330
            ++    
Sbjct: 322 GLLPFVA 328


>gi|319763585|ref|YP_004127522.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|330824149|ref|YP_004387452.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317118146|gb|ADV00635.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|329309521|gb|AEB83936.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 287

 Score = 79.5 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 88/305 (28%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A GL++V G L + +      Y +GA+      + +G   W+ +  
Sbjct: 8   VLNGLTLGGIYGLVALGLTLVYGILHVPNFAHGAFYMVGAFVAFHAMNAWGWGYWVAMLA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A +  A  ++              I  +I +      L        G     +      
Sbjct: 68  AAAVVAALAVVSERLVFHPLRKASGIHPMIAAIGVLLFLEAGAQALWGADFQRMPTPYTS 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +                 +        ++     L  ++ L+L RT   +    +  N++
Sbjct: 128 IVEM------------GGITAPAQRLLIIAAAFALMVALHLFLTRTTTGSTIIAMAQNRE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        +  FA+S     +A   +A     +               I+ILGGM
Sbjct: 176 GASLVGIDANRVSMLTFAISGMLAAVAATLYAP--INLVYPAMGNLVITKAFVIIILGGM 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+                               +  + L +++ +R   
Sbjct: 234 GSVPGAIVGGLIIGFAESFGAFYIS-------------TDYKDIVAFVLLVVILSLRPQG 280

Query: 339 LLRLR 343
           L   R
Sbjct: 281 LFAKR 285


>gi|126731077|ref|ZP_01746885.1| ABC transporter ATP-binding protein [Sagittula stellata E-37]
 gi|126708379|gb|EBA07437.1| ABC transporter ATP-binding protein [Sagittula stellata E-37]
          Length = 336

 Score = 79.5 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 107/351 (30%), Gaps = 25/351 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQ---------KYIDSMGIQILIYVM 51
           M  F  R   +  I+ L A +   L+F                    I        +Y +
Sbjct: 1   MQRFIQRHPVWSFIIALGAAILLWLIFAPWSTGMEDALGKKRIFLNGIFGGITLGALYFL 60

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A G +++ G +  ++L     Y +G Y    +  R G        V  ++     ++  
Sbjct: 61  VASGFTLIFGLMRNVNLAHGSLYLLGGYLGFEVSERTGSWFLAFPVVFVVVGIVGIVLQN 120

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
               +  G+ L    + +        +           IY  D L+   T          
Sbjct: 121 QVFRRMEGEELRQTMVTIGLSVVIADLLLWQWGGQSYTIYAPDILFGPMTLPVVSDVRDS 180

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
               ++ Y      +L     +   + L L +T +    R   D+++   +    I +  
Sbjct: 181 GEVVYLKYPAVRMAILFAAIVIGVGMWLVLNKTRLGMLVRAGVDDREMLAASGVRIQYVF 240

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           L+ FA  +   GMAG      +     +  +F      + +VI+GGM S+   A    I+
Sbjct: 241 LAVFAFGAGLAGMAGIVGGTFQSLSPGEDTRFLL--ASLVVVIVGGMGSIPGAAIGALII 298

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +L                            + + +V+  R   LL  
Sbjct: 299 GLSEQLGLIYA--------------PTYSVVFTFLIMAVVLAFRPQGLLGR 335


>gi|297568091|ref|YP_003689435.1| inner-membrane translocator [Desulfurivibrio alkaliphilus AHT2]
 gi|296924006|gb|ADH84816.1| inner-membrane translocator [Desulfurivibrio alkaliphilus AHT2]
          Length = 368

 Score = 79.5 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 61/360 (16%), Positives = 121/360 (33%), Gaps = 57/360 (15%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L +  ++  ++L   L      ++  +       Y +   GL +++G  G +SL     
Sbjct: 4   LLPISLLLATVVLIQQLTLWTDTQFYLTQLTMTGYYSLLIIGLCLLLGYAGQISLGHAGF 63

Query: 74  YAIGAYSYVILGSR-------------------------------YGLSIWLLIPVSAMI 102
           +AIG Y+  +L +R                                    W    ++   
Sbjct: 64  FAIGGYTSAVLTTRDFSLHLDHPLLVVSDRLGLLMSRADYFGGEIIHFHPWAAAALALAA 123

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++G+P LK +G YLA+ATL    I   + +             V       G +
Sbjct: 124 TMIIAYLIGVPVLKLKGHYLAMATLGFGIIIYRVALASPIFGEADGIFEVPAFPLLAGLS 183

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +                 +  YY+   +  ++  ++L L  + +    R I  +++A  +
Sbjct: 184 ISGDF----------GSRVSNYYIAWVLVAITMFLLLNLINSRVGRGLRAIHGSEEAANA 233

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +       KL  F +S+    +AG F       I P      +++  ++IV +GGM +L 
Sbjct: 234 MGINTASYKLRTFILSAVLAALAGVFMTHYSSGIGPSEAGVMQSVRYVAIVAVGGMANLW 293

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   L                + +     F      +  + L  ++L     LLRL
Sbjct: 294 GALTMGVGL----------------NFMSLRGMFGTYDEAVFGLILITIMLFAPQGLLRL 337


>gi|119386726|ref|YP_917781.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119377321|gb|ABL72085.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 411

 Score = 79.5 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 47/352 (13%), Positives = 96/352 (27%), Gaps = 36/352 (10%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L+    G+         +  + L   + A  + +V G LG+LSL  +  +A+G Y     
Sbjct: 29  LMSTAYGSGALPTSTVKVLGKTLCLALAAVAMDLVWGYLGILSLGQMAFFALGGYMIGQW 88

Query: 85  GSRYGLSIWLL-------------------------------IPVSAMISGACGMIMGLP 113
                    +                                +P+   ++ +    + L 
Sbjct: 89  LMYARTEAIVAASLSGNPIPPTVQELREAVANQIFGVVGSADLPLVWTLAHSLTAQLVLV 148

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
                   L    L        + +         A      +          L      P
Sbjct: 149 VAVPGLLALVFGWLAFRSRVNGVYLSILTQAMTLALALWLFQNDSGFRGNNGLSGLQNIP 208

Query: 174 S----SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                      ++  +       L   +  W+      +  R IRD++     L   +  
Sbjct: 209 GLDGVGQARLSVWFLWASAAALALFYVLAAWVVGGKFGSVIRAIRDDETRVRFLGYPVEG 268

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            KL+ F +++    +AGA +      I+P       +I +   V +GG   L        
Sbjct: 269 FKLAVFTLAAMITAIAGALYYPQAGIINPAELMPIASIYLAVWVAIGGRGRLYGAMIGAI 328

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           ++  +     G      N L  +   +       + ++  LV L     +  
Sbjct: 329 VVSLLSSWFTGGRAPDLN-LPGYAVKWVDWWQVALGLSFVLVTLFAPKGIAG 379


>gi|311106495|ref|YP_003979348.1| high-affinity branched-chain amino acid transport system permease
           BraD 1 [Achromobacter xylosoxidans A8]
 gi|310761184|gb|ADP16633.1| high-affinity branched-chain amino acid transport system permease
           protein BraD 1 [Achromobacter xylosoxidans A8]
          Length = 308

 Score = 79.5 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 95/297 (31%), Gaps = 16/297 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
             +      IY + A G ++V G +G+++      Y IGAY  ++  +            
Sbjct: 12  FFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTAIGTNSGLPIPF 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            I  ++ V+ +++G  G  +   + +       +  LI +      L  W  +  G    
Sbjct: 72  IIAAMLVVAIVVTGIYGFSVERVAYRPVRGSPRLVALISAIGMSIFLQNWVALGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   + + V   ++F       V        +++    L   + L+++ + +  A 
Sbjct: 129 ----RDMAVPSLVSGAVQFHMGSDFDVTVPYSRIMIIVVTVLLMIGLTLFIKYSRMGRAS 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    +      L           F + +    + G   A +  +++     F   I   
Sbjct: 185 RACSQDMHMANLLGIDTNRVISFTFVMGAILAAVGGVLIAITIGKLN-PFIGFLAGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  +LGG+ S+        +L              +  ++ F     +       + 
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAAYISSQYKDIVAFSLLILILLFRPTGLL 300


>gi|221067280|ref|ZP_03543385.1| inner-membrane translocator [Comamonas testosteroni KF-1]
 gi|220712303|gb|EED67671.1| inner-membrane translocator [Comamonas testosteroni KF-1]
          Length = 307

 Score = 79.5 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 86/303 (28%), Gaps = 14/303 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G +G+++      Y IGAY  ++  S  G    L +  
Sbjct: 12  LFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGDIYMIGAYIGLVTLSAIGTQSGLPVWA 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +     + +                     +   I      I               
Sbjct: 72  IIGLMLVVAVFVTGVYGLVVEQVAYKPVRQSPRLVALISAIGMSIFLQNWVALGQGARDM 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              ++      F      V        ++     L  ++ ++++ + +  A R    +  
Sbjct: 132 AVPSLLPGAINFHMGDFEVFIPYTRVLIIAVTVVLMIALTMYIKHSRMGRASRACAQDMH 191

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +    + G   A +  +++P    F   I   +  +LGG+
Sbjct: 192 MANLLGIDTNKVISFTFVLGAVLAAVGGVLIALAVGKLNPF-IGFLAGIKAFTAAVLGGI 250

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL              +  ++ F               L  +++ R   
Sbjct: 251 GSIPGAMLGGVILGVAETFAAAYISSEYKDIVAFG-------------LLVTILMFRPSG 297

Query: 339 LLR 341
           LL 
Sbjct: 298 LLG 300


>gi|148258850|ref|YP_001243435.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. BTAi1]
 gi|146411023|gb|ABQ39529.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 356

 Score = 79.5 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 54/322 (16%), Positives = 110/322 (34%), Gaps = 13/322 (4%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---R 87
                     ++  +I I+        +++G  G +S    + Y IG+Y+  I       
Sbjct: 29  PFIFPGAKALNVAAKICIFAALVASYDLLLGYTGSVSFAHTMFYGIGSYAIAIALYGLGP 88

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
              S+ + +     ++    + +GL SL+    + A+ TL ++  F  +  +   +T G+
Sbjct: 89  NWTSVAVAVAAGLPLALLLALAIGLFSLRVEAIFFAMITLAVASAFLVLASQLSWLTGGE 148

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
            G            TV     +F FP +     I  YY++L  C L    +L +  +   
Sbjct: 149 DGRSFQLPELLRPGTVFIGKEWFGFPING---RILTYYLVLSACALMILALLRVVNSPFG 205

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI-SPDMFKFSEN 266
              + IR+N+    +L    +F    A  +++     AG   A             FS  
Sbjct: 206 RVLQAIRENRFRAEALGYRTVFHLTYANCIAAMIAAGAGMLNALWLRYAGPDTSLSFSIM 265

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGM------NFYYFNSLLKFDCSFNMRH 320
           + ++ +V++GGM ++       AI I        +              L        R 
Sbjct: 266 LDILLMVVIGGMGTIYGAIIGAAIFILAQNYLQALMSIASTAAADAGLPLLPGLLHPDRW 325

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
              + +     +      ++  
Sbjct: 326 LLWLGLLFIASVYFFPTGVVGR 347


>gi|146342705|ref|YP_001207753.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. ORS278]
 gi|146195511|emb|CAL79536.1| Putative branched-chain amino acid ABC transporter, permease
           protein [Bradyrhizobium sp. ORS278]
          Length = 380

 Score = 79.5 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 46/325 (14%), Positives = 95/325 (29%), Gaps = 30/325 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+    ++ + L       +  +   + L++ M    +++  G  G+L+L   + +  GA
Sbjct: 10  AIYAIFIVAIMLVPLIMDSFWLNRLAKYLVFGMLGIAVALSWGYAGILNLGQGLFFGAGA 69

Query: 79  YSYVILGS--------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           Y   +                      +W   P +            L        +   
Sbjct: 70  YMLAMSLKLASSTSLQQGSDKPVPDFMLWNAEPGAKTELCCINKASFLWLPFQSQWFGVA 129

Query: 125 ATLIMSEIFQNIL----------------IKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
             LI+  +   +L                I    +   +  +  A  +      +  L  
Sbjct: 130 MGLILPVVIAFVLGSIVFRKRIAGVFVSIITLALVLLVRLVMIDAQPVTNGFNGLTDLGW 189

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
           F      F  Y +  YY++     +   +   L  T      + IRD+Q     L   + 
Sbjct: 190 FKLGEFEFDPYVVPTYYLIAISLSVMLVLARLLVETRAGVILQAIRDDQNRARYLGFDVP 249

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
             +   FAVS+   G AG  +    +  SP     S +I ++    +GG  S+       
Sbjct: 250 AYQTFFFAVSALIAGFAGMLYVIVSEFASPTFMDLSFSITMVVWAAVGGRASILGACIGA 309

Query: 289 AILIGVVELCCGMNFYYFNSLLKFD 313
            ++  +         +         
Sbjct: 310 ILINMISATVSETEGFAEAWKAIIG 334


>gi|288922862|ref|ZP_06417026.1| inner-membrane translocator [Frankia sp. EUN1f]
 gi|288345788|gb|EFC80153.1| inner-membrane translocator [Frankia sp. EUN1f]
          Length = 826

 Score = 79.5 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 57/337 (16%), Positives = 123/337 (36%), Gaps = 16/337 (4%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           +    ++  L  +  L +   +  T+       +  + ++  +    +++V G  G +SL
Sbjct: 335 DPRLAMIIRLVGLAVLAVTATVVLTRGDSLWVFLVTKAVVMGIIFLSITVVTGMSGQISL 394

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                 AIGA++   +  RY LS+ +   + A ++   G ++ LP  +  G + AIATL 
Sbjct: 395 CQGTFAAIGAFTVYQMVVRYDLSVLVAALIGAAVAAVVGALLSLPIRRLGGIWTAIATLA 454

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
            +  F  +L+K   +  G   +     +                    +  + +      
Sbjct: 455 FAYFFDAVLVKLSWVGGGDEAVLQGTAVPRPVIGPWD-----------LGDDKYYLVFAS 503

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  + A+++L LR+         +R ++    S+  +    +L AFAVS+   G+ GA 
Sbjct: 504 IVLVVVAAVVLQLRKGTFGRTLVAMRGSEVGAESIGISSARVRLIAFAVSAFIAGLGGAL 563

Query: 249 FAASRDRISP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC--CGMNFYY 305
            A ++  +S    F     +  + +V+  G  ++     A A       L        + 
Sbjct: 564 LAMAQKDVSYGTNFGPFAALFWVVMVVTLGSRTIRGALNAAAAFALFEPLILSGTFIAWI 623

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMR--SHSLL 340
             S       F +    + V+     +        L+
Sbjct: 624 ARSEDAVPDFFPITGNWVFVLFGLAALQFARHPEGLV 660



 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 61/217 (28%), Gaps = 3/217 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       ++Y + A G  +   + G+ +L       + A    +         W  +P 
Sbjct: 14  LLQGLPPGVVYSLVALGFVLTYKTSGVFNLAFGAQAYVSA---AMYFKARITWEWPTVPA 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +       ++GL   +     L  A  +   +    L    P        + A     
Sbjct: 71  VILAVFVLPPLIGLVLERLIFRPLRTAPAVARLVVAAGLAVAIPYLFDILAKFTAVAGET 130

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                      F  P     +       +  +      ++   R +AI    R + ++ K
Sbjct: 131 PVGVAPDGANVFYDPFGVYAFSRDELVSMGVVLVAVVGLVALFRFSAIGVRMRAVVESPK 190

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                          ++ +SS F G+AG   A   + 
Sbjct: 191 MTELNGIAADRISALSWVLSSFFAGIAGVLIAPRFNT 227


>gi|311105871|ref|YP_003978724.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310760560|gb|ADP16009.1| inner-membrane translocator 31 [Achromobacter xylosoxidans A8]
          Length = 290

 Score = 79.5 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 94/315 (29%), Gaps = 26/315 (8%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
            L        + +      +Y + A GL+++ G L +++     A  +  Y+  +L  R 
Sbjct: 1   MLDPAILFSSVLNGLTTGAVYALIALGLTLIYGVLHIINFAHGAALMVALYAVYLLKDRL 60

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           G+  +  +P+      A G  +    +           L+++     +L     +     
Sbjct: 61  GIDPYAALPLVVAGMFALGYALQRYVINRASHGKDENILLVTLGLAIVLENLALVWFKSD 120

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                        T+ +            +  +       G   ++A +   +R T +  
Sbjct: 121 -----------TRTIDTAYTLSTVEIGPAMIALPKVIAFCGALAVAAVLFWIIRSTDLGR 169

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           A R +   ++    +   +      +F +  A +G A  F   +              ++
Sbjct: 170 AIRAVAKEKQGAKLMGIDVEKVYALSFGIGMACLGAAACFLLPAYYV--NPQVGGGFVLV 227

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
             +IV+LGGM S         ++  V  +           +              +    
Sbjct: 228 AFTIVVLGGMGSFVGALVGGLLIGVVESIGGLFLGDSLGQMG-------------IFAIF 274

Query: 329 FLVILMRSHSLLRLR 343
             V+L R   L   R
Sbjct: 275 IAVLLFRPQGLFGAR 289


>gi|118590374|ref|ZP_01547776.1| inner-membrane translocator [Stappia aggregata IAM 12614]
 gi|118436837|gb|EAV43476.1| inner-membrane translocator [Stappia aggregata IAM 12614]
          Length = 311

 Score = 79.5 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 102/314 (32%), Gaps = 28/314 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-----------SYVILGSR 87
           + +      IY + A G ++V G +G+++      + +GA+           +  +  + 
Sbjct: 8   LINGVTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMVGAFIALIFIVAFGITAGLPVAL 67

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             L++  ++ +S  ++ A G  +   + +       +A LI +      L  +  I+ G 
Sbjct: 68  LILALIGVLVISMALTAAWGWTVERIAYRPLRGSFRLAPLITAIGASITLQNFVQISQGA 127

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
               +   +    T          F       +I    +++    L       + +T++ 
Sbjct: 128 RNKPLQPLISGGFTLSDGGPDGSGFIVQLSYSQI---LIIVVTVVLMVGFTFLINKTSLG 184

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
            A R    ++K    +   +       F + +    +AG  F      I      F   +
Sbjct: 185 RAQRACEQDRKMASLVGVNVDRTISLTFVMGAGLASVAGLMFLLYYGVIDFY-IGFLAGV 243

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              +  +LGG+ SL        ++  +     G     +  +  F               
Sbjct: 244 KAFTAAVLGGIGSLPGAMLGGLLIGLIETFWSGYFSVEYKDVAAFS-------------I 290

Query: 328 LFLVILMRSHSLLR 341
           L +V++     LL 
Sbjct: 291 LAIVLIFMPEGLLG 304


>gi|313500824|gb|ADR62190.1| Inner-membrane translocator [Pseudomonas putida BIRD-1]
          Length = 495

 Score = 79.5 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 222 ITFGLLGVINMAHGEMLMLGAYSTYMVQVLLQRFAPGAIEFYPLIALPVAFAVSAGVGMA 281

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         I +      +  +  + +         +
Sbjct: 282 LER--TVIRHLYGRPLETLLATWGISLILIQAIRLLFGAQNVEVSNPAWLSGGIQLLPNL 339

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++     +     L L RT +    R +  N+        +     + AF +
Sbjct: 340 VLPYNRLVIIGFALAVVLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVSTGRVDMLAFGL 399

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    +L
Sbjct: 400 GSGIAGLGGV--ALSQVGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSLWAAFGLGIANKL 457

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 458 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 492


>gi|260466751|ref|ZP_05812937.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259029481|gb|EEW30771.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 300

 Score = 79.5 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 101/304 (33%), Gaps = 17/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G +G+++      + +GA++ +I+    G   + +  V
Sbjct: 8   LINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMVGAFAALIVFLILGALFYSVPVV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A++      ++      +  + +A   L  S     ++            + V      
Sbjct: 68  IALLVMMIVAMLLTSLYNWTIEKVAYRPLRGSFRLAPLITAIGMSITLSNFVQVTQGPRN 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +    +  + V   +    +++    L A     + +T++  A R    ++K
Sbjct: 128 KPI---PPMVSEVYNINGVSVSLKQIIIVIVTALLLALFWYLVNKTSLGRAQRACEQDRK 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       F + +A   +AG  F      ++     F+  +   +  +LGG+
Sbjct: 185 MAALLGIDVDRTISITFIMGAALAAVAGTLFLMYYGVVAF-SDGFTPGVKAFTAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        ++  +  +        +  +  F               L +V++     
Sbjct: 244 GSLPGAVLGGLLIGFIESMWSAYFSIDYKDVAAFS-------------ILAIVLIFLPSG 290

Query: 339 LLRL 342
           +L  
Sbjct: 291 ILGR 294


>gi|169350914|ref|ZP_02867852.1| hypothetical protein CLOSPI_01690 [Clostridium spiroforme DSM 1552]
 gi|169291976|gb|EDS74109.1| hypothetical protein CLOSPI_01690 [Clostridium spiroforme DSM 1552]
          Length = 291

 Score = 79.5 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 101/303 (33%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A G ++V G   +++        +GAY      S +GL + L + +
Sbjct: 7   IINGLSTGSMYALVAVGYTMVYGIAKMINFAHGEIIMVGAYITYACMSVFGLPMILAVIL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +     G++    + +      ++A LI +     +L     I  G A          
Sbjct: 67  SIIGCALLGIVTERVAYRPLRGSGSLAVLITAIGVSYLLQNLFLIIFGSA---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T   +I         +         L+     +A ++ ++ +T +  A R + ++ K
Sbjct: 117 -SLTFPKIIPSGTIHLGAISMSYVTIATLVITAISTALLLFFINKTKLGKAMRAVSEDGK 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   I       FA+ SA   +AG  +      I+P        I      +LGG+
Sbjct: 176 AAQLMGINIDTTIALTFAIGSALAAIAGVIYGTKFSLINPY-IGAMLGIKAFIAAVLGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+              F+  + F               L  ++L++   
Sbjct: 235 GSIQGAMIGGLIIGIAESFTITYISSAFSDAVVFG-------------ILIFILLIKPAG 281

Query: 339 LLR 341
           L  
Sbjct: 282 LFG 284


>gi|149375742|ref|ZP_01893510.1| Branched-chain amino acid ABC-type transport system, permease
           component [Marinobacter algicola DG893]
 gi|149359867|gb|EDM48323.1| Branched-chain amino acid ABC-type transport system, permease
           component [Marinobacter algicola DG893]
          Length = 307

 Score = 79.5 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 93/297 (31%), Gaps = 16/297 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--------YVILGSRYGL 90
           + +       Y + A G ++V G +G+++      Y IGAY+          +  +   L
Sbjct: 11  LINGLTIGSTYALIAIGYTMVYGIIGMINFAHGEIYMIGAYTALIAITGLAALGIAWLPL 70

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + + +  + ++S + G  +   + +       +  LI +      L  +  +  G    
Sbjct: 71  ILIVALVCAMIVSSSMGWAVERVAYRPVRGKHRLIPLISAIGMSIFLQNYVHLAQGS--- 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R       +    RF    S           +          + L++ R+ I  A 
Sbjct: 128 ----RNIGFPALIEGGFRFGAEDSFQTSITYMQITIFATTLVCMTILSLFISRSRIGRAC 183

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +  +      L         + F + +A   +AG         I   +F F   +   
Sbjct: 184 RAVSQDLGMANLLGIDTNRIISATFVIGAALAAVAGLLLGMYYGSID-PLFGFIAGLKAF 242

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  +LGG+ S+        IL     +  G     +  ++ F     +       + 
Sbjct: 243 TAAVLGGIGSIPGAMLGGLILGVAESMTSGYLSGEYKDVVSFGLLILILLFKPTGLL 299


>gi|256544600|ref|ZP_05471972.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Anaerococcus vaginalis
           ATCC 51170]
 gi|256399489|gb|EEU13094.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Anaerococcus vaginalis
           ATCC 51170]
          Length = 295

 Score = 79.5 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 100/303 (33%), Gaps = 21/303 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G   L++        +GAY+   +         L + +
Sbjct: 7   LFNGLQLGSIYALIALGYTMVYGVAKLINFAHGDIIMVGAYTIFFVVQTSLFRSGLPLYL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +     ++G+   +     L  ++ I   I    +  +                  
Sbjct: 67  AIIPAIIACTLLGVVIERIAYKPLRNSSSISILITAIGVSLFLE-------NLFVKVFTA 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V SL          +       + ++    L+  + +++ +T        + ++ K
Sbjct: 120 NARPVPSLFNQASLNIFGIRLSFQTIFTIVLTIILTIILQIFISKTKYGKMMLAVSEDYK 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G+A   + +S  +I+         I   +  ++GG+
Sbjct: 180 ASSLVGINVDNTMTMTFAIGSALAGVASLLYVSSYPQIT-PFIGSMLGIKAFTAAVVGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL  +  +        +                ++ + L LV++++   
Sbjct: 239 GSIPGAVIGGFILGMIEVMTRAYLSSSYADA-------------IVFLVLILVLIVKPTG 285

Query: 339 LLR 341
           +L 
Sbjct: 286 ILG 288


>gi|115523407|ref|YP_780318.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115517354|gb|ABJ05338.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 353

 Score = 79.5 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 45/338 (13%), Positives = 109/338 (32%), Gaps = 14/338 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++  +                ++  +I I+        +++G  G +S    + Y
Sbjct: 13  VLSILLILIVTALALAPFLFPGAKALNVATKICIFAALVASYDLLLGYTGSVSFAHTMFY 72

Query: 75  AIGAYSYVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
            IG+Y+  I          ++   + +   ++    + +GL SL+    + A+ TL ++ 
Sbjct: 73  GIGSYAIAIALYGMGPSWTAVATGLAIGLPLAALLALGIGLFSLRVEAIFFAMITLAVAS 132

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            F  +  +   +T G+ G                 +    F    +      YY++   C
Sbjct: 133 AFLVLASQLSWLTGGEDGRSFQLP----ELLRPGTVFVKNFFGFTLNGRTLTYYIIFIGC 188

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                 +L +  +      + +R+N+    +L    +F    A  +++     AGA  A 
Sbjct: 189 AAMILGLLRVVNSPFGRVLQAVRENRFRAEALGYRTVFHLTYANCLAALVAASAGALNAM 248

Query: 252 SRDRI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                       FS  + ++ +V++GGM ++       AI I        +      +  
Sbjct: 249 WLRYAGPDTSLSFSIMLDILLMVVIGGMGTIYGAIVGAAIFILAQNYLQALMGVASTAAA 308

Query: 311 KFDCSF------NMRHTTLMVIALFLVILMRSHSLLRL 342
                         R    + +     +      ++  
Sbjct: 309 DAGLPLLPGLLHPDRWLLWLGLLFIASVYFFPTGIVGR 346


>gi|300703665|ref|YP_003745267.1| high-affinity branched-chain amino acid transporter permease (livm
           or livh) [Ralstonia solanacearum CFBP2957]
 gi|299071328|emb|CBJ42646.1| putative high-affinity branched-chain amino acid transport system
           permease (livM or livH) [Ralstonia solanacearum
           CFBP2957]
          Length = 406

 Score = 79.5 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 48/347 (13%), Positives = 97/347 (27%), Gaps = 32/347 (9%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            +L  + V    L+     A     Y  ++  +I+ Y + A  L +V G  G+LSL   +
Sbjct: 32  SLLVCIGVPVCALVVPQGHALHLSAYALTLVGKIMCYALAALALDLVWGYCGILSLGHGL 91

Query: 73  AYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
            +A+G Y+  +                                          +++ L  
Sbjct: 92  FFALGGYAMGMYLMRAIGRDGVYQSDLPDFMVFLDWKALPWFWHGTEHFAWAALLVVLVP 151

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
                 +   A     +     +I            +  +  +          R   FP 
Sbjct: 152 GVLAWLFGFFAFRSRVKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGFPI 211

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
           + V     ++        L+      +  +        IRD +        + +  KL  
Sbjct: 212 AAVSTRTVLFVATFIALVLAFIACRAIVTSKFGRVVTAIRDAEARAMFSGYSPLGYKLFV 271

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           +  S+   G+AGA +      I+P       +I +   V +GG  +L        ++ G 
Sbjct: 272 WTFSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAVWVAVGGRGTLVGPIVGAFLVNGA 331

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             +                         ++     LV L   + +L 
Sbjct: 332 KTVLTAW--------------VPEYWLFVLGAVFVLVTLFLPNGVLG 364


>gi|294085323|ref|YP_003552083.1| branched-chain amino acid ABC transporter permease [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664898|gb|ADE39999.1| branched-chain amino acid ABC transporter, permease protein
           [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 332

 Score = 79.5 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 70/287 (24%), Positives = 129/287 (44%), Gaps = 2/287 (0%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           LL  +  L +   L    +Q+Y  S  I  +I+   A   ++++G  G+ SL  ++ +AI
Sbjct: 11  LLIALLFLSVMAILPLIVTQRYFLSQIIVFMIWASVAVQWNVLIGHAGVFSLAQMLIFAI 70

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY   +L S + +S W  +P++ +I+  C   +GL  L+    Y+A+ T  +S +   +
Sbjct: 71  GAYGLAMLNSYFDISPWAAMPLAGLIAALCAAFIGLACLRLGTAYVALLTFAISYMVFVL 130

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           +I          G     R +   T    L            + +  +YV+LG+   S  
Sbjct: 131 IITEATCYTNVGGG--CQRFFGGTTGFSRLDDLGFRKLLRGQWMVGNFYVVLGVLAASLI 188

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
             + +    +  A+  + D++    S        +L AF +++ F G+ GA +AA     
Sbjct: 189 AAISVIHGRLGLAFLALSDSRTYAISRGLNRTKFQLLAFVITAFFTGLTGAAYAAHFKSA 248

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
            P +F FS  + V+++VI+GG+ S        A+++ VVEL      
Sbjct: 249 GPSLFDFSLLMFVLAMVIVGGLKSTWGPLVGAAVMMVVVELAKDYGD 295


>gi|119720481|ref|YP_920976.1| inner-membrane translocator [Thermofilum pendens Hrk 5]
 gi|119525601|gb|ABL78973.1| inner-membrane translocator [Thermofilum pendens Hrk 5]
          Length = 344

 Score = 79.5 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 60/325 (18%), Positives = 115/325 (35%), Gaps = 24/325 (7%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI- 96
           ++ S    + IY + A  L+   G+ G+ +   V  Y +GAY    L     L +  +  
Sbjct: 7   FLISWLTLLGIYAILALTLNFESGTSGVTNFGKVFFYGLGAYVGATLTVYLFLLLNGVDV 66

Query: 97  -----PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG-- 149
                   + I     +    P+L      L++AT  +       L+ +  I  G A   
Sbjct: 67  SKTPPYDVSGIVLLGELAGKNPALNLGLLALSLATAFLVAGVIGYLLSYPIIRVGPAFVG 126

Query: 150 ------------IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                                    + S+   F +     + E+    ++L +   +  +
Sbjct: 127 FTLLSTGELFRIFLQHYEPVGGSRGLMSIPGPFSWVPQPRLREVLFLALVLAVLAATYLV 186

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  + +    R +RD++ A   +   +   K +   + S F G+AG   A     ++
Sbjct: 187 MDRLTNSPLGRTLRAVRDDEVAALCMGKHVPKLKATVLFIGSGFSGVAGVLLAYYLTSVN 246

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           PDMF  +    V +++ILGGM +L       +I   +      +      +++  D    
Sbjct: 247 PDMFVPAVTFNVWAMIILGGMGNLRGALLGASIFTFIDRALSFVTPQLGVTVISPDYVRG 306

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                +MV+ L    L R   LL  
Sbjct: 307 FAVGLVMVLVL----LYRPQGLLPE 327


>gi|162453857|ref|YP_001616224.1| putative branched-chain amino acid ABC transporter, permease
           protein [Sorangium cellulosum 'So ce 56']
 gi|161164439|emb|CAN95744.1| putative branched-chain amino acid ABC transporter, permease
           protein [Sorangium cellulosum 'So ce 56']
          Length = 377

 Score = 79.5 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 89/299 (29%), Gaps = 13/299 (4%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-------GSRY 88
             +  ++  + L Y + A GL ++ G  G+LSL   + + +G Y+  +            
Sbjct: 33  SDFRLNLLGKFLTYAIVALGLDLIWGYGGMLSLGQGLFFGLGGYAMAMYLKLETSGSRLP 92

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM------SEIFQNILIKWKP 142
               W  +    +        +              + +         +     LI    
Sbjct: 93  DFMSWSGLEALPLFWEPFRSPVVALCAVVLLPMAIASAVGYLVFRSRVQGVYFSLITQGL 152

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
                        +      + +L   F F       +  +Y+V L        +   L 
Sbjct: 153 TLIASILFIGQQAVTGGTNGITNLKTIFGFARGATGTQTVLYFVTLFCLGALYLLCRKLT 212

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           ++        +RD++     L    +  K   FA+S+   G+AGA F      ISP    
Sbjct: 213 QSRFGRLLVAMRDDENRVRFLGYNPVTLKTLVFALSAGMAGIAGALFVCQVGLISPSSMG 272

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
              ++ +++ V +GG  +L        ++              +        + ++   
Sbjct: 273 VIPSVEMVTWVAVGGRGTLIGAVVGAILVSLGKSALSESYPEVWQLGFGALFAASVMLL 331


>gi|284047402|ref|YP_003397741.1| inner-membrane translocator [Acidaminococcus fermentans DSM 20731]
 gi|283951623|gb|ADB46426.1| inner-membrane translocator [Acidaminococcus fermentans DSM 20731]
          Length = 298

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 95/303 (31%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A G +++ G + L++      Y +GAY   +  ++ GL     + V
Sbjct: 14  IVNGVSLGSIYALIALGYTMIYGIIKLINFAHGDIYMLGAYIGFVAITKAGLPFLPALIV 73

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S + +   G+I+   + K   +   IA LI +      L     +               
Sbjct: 74  SMIGAALAGIIIERIAYKPMRNAPRIAALITAIGVSFFLENGMILLVSPQPRTFPPVFAP 133

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             ++       +L+    L  ++   + RT    A R +  +  
Sbjct: 134 TVYH-----------IGGIVVNNQQIMILVSALLLMLALTYIVNRTKAGKAMRAVSFDAD 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +         + FA+ SA    AG       + I P M      I      ++GG+
Sbjct: 183 AAKLMGIDTDRVISTTFALGSALAAAAGVLVGIYYNSIDPLM-GMMPGIKAFIAAVVGGI 241

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L        I+  V  +  G     +     F               L L++L +   
Sbjct: 242 GILPGAMLGGIIMGLVEAMVSGFFSSTYRDAAAF-------------AILILILLYKPTG 288

Query: 339 LLR 341
           LL 
Sbjct: 289 LLG 291


>gi|228914557|ref|ZP_04078166.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228844876|gb|EEM89918.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 317

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 59/322 (18%), Positives = 128/322 (39%), Gaps = 31/322 (9%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY   +
Sbjct: 2   LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61

Query: 84  LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           L  R      + ++ I  + +IS     I+GL SL+ +  + A+ TL +S++F  +  KW
Sbjct: 62  LFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T+G  G        F                         YYV L    +   ++  
Sbjct: 122 RGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVLLRL 162

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++  +
Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVNTTV 222

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F     +  + + ++GG+ +L            +       +  Y+ S L  +     R 
Sbjct: 223 FSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIFERW 273

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
           T ++ +   +V+L+    L+  
Sbjct: 274 TIILGLLYIIVLLVFPKGLVGT 295


>gi|116749572|ref|YP_846259.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
 gi|116698636|gb|ABK17824.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
          Length = 324

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 68/324 (20%), Positives = 134/324 (41%), Gaps = 33/324 (10%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +   +L+FL +       Y   +   IL+Y + A GL+I+VG  G  +    + + IG
Sbjct: 16  IVLGAAVLVFLIVAPFVLSNYWLRVLTSILMYGIVAQGLNIIVGYTGYHAFGNSVFFGIG 75

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYS  +  +   L   L + ++  ++    +++G P L+  G Y AIAT+ ++     ++
Sbjct: 76  AYSTGVGMALG-LPFGLALALTVPVAVVVAVMVGWPLLRLSGHYFAIATVALNMAMMEMV 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I    IT G  G+ +                         +    +Y V+L +   + + 
Sbjct: 135 INVGGITGGAQGLALPINPM-----------------GPAMLYKIIYLVMLLILAGATAT 177

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           + WL R ++  A R +RD+++    +       K+ A+A S +F  +AG  +A     I 
Sbjct: 178 VYWLDRGSLGYALRALRDSEQGAQVMGINTTAMKIMAWAASGSFTALAGGVWAYWFTFIE 237

Query: 258 PDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P   F  + +I    ++++GG+ ++       A L     +  G               F
Sbjct: 238 PSSAFDINISIKGYVMMLMGGLGTVFGPLIGAAFLELFATIIWG--------------KF 283

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
              H  ++ + + LV+ +    LL
Sbjct: 284 LKIHLLILGMLIVLVVTLMPQGLL 307


>gi|317121366|ref|YP_004101369.1| inner-membrane translocator [Thermaerobacter marianensis DSM 12885]
 gi|315591346|gb|ADU50642.1| inner-membrane translocator [Thermaerobacter marianensis DSM 12885]
          Length = 367

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 58/294 (19%), Positives = 122/294 (41%), Gaps = 36/294 (12%)

Query: 53  AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112
           +   ++V G  G +S    + Y +GAY+  +L +  G+  ++    +A+++    +++GL
Sbjct: 87  SIAWNLVGGFAGQVSFGFAVFYGLGAYTAALLITAGGVHPYVSFAGAALVAAVASLLIGL 146

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
           P+ + RG Y AIAT+ ++E  + ++   + I    +G  V +R  F+             
Sbjct: 147 PTFRLRGPYFAIATIGVNEAVRVVMNNLQFI-GAASGYRVMERARFVMEEH--------- 196

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
                      Y   + +  ++    + + R+    A + IRD++ A   +       KL
Sbjct: 197 -----------YLTAVVLFAVALLASVLVARSRFGLALQAIRDDEDAAADVGINPFLHKL 245

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           +  A+++A +G AG  +A     I P   F F+ ++ ++ + ++GG+ ++       A+ 
Sbjct: 246 AVHALAAALVGAAGGIYARYAAFIDPSGVFNFNNSVSILLMPVIGGLATVWGPVIGGAVY 305

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
             V E                   F   H  +    L L+IL     ++ L   
Sbjct: 306 GIVQEELVA--------------RFTDLHLGIYGALLILIILFEPGGVMGLARR 345


>gi|312141172|ref|YP_004008508.1| branched-chain amino acid ABC transporter transmembrane protein
           [Rhodococcus equi 103S]
 gi|311890511|emb|CBH49829.1| putative branched-chain amino acid ABC transporter integral
           membrane subunit [Rhodococcus equi 103S]
          Length = 346

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 62/291 (21%), Positives = 111/291 (38%), Gaps = 15/291 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + + A +  +++   L       Y   +      Y + A G+ I     G LS+      
Sbjct: 27  IAIEAGITLVVVAAVLVWMGPSLYRQDLVFLAATYSLIALGMYIPFVMAGSLSMAYSAYA 86

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AIGAY+  ++  + GLS+W    + A+++    +I+ L + K  G YLA  TL+    F+
Sbjct: 87  AIGAYAVALVSVKTGLSMWWGWVIGALVAAVVAVILALATQKLSGFYLAAVTLLFGIAFE 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           + LI     T G AGI   + +                   +      +  + +      
Sbjct: 147 HWLIDGPDFTGGSAGISGVEAVT---------------LFGWQPPRYTLVVLAILFVCAI 191

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A ++  +R++      R  RDN+ A  S         + A A+ +A     G+ F  S  
Sbjct: 192 AVVVDRMRKSVWGLTLRAARDNKNAARSSGVNPAHLTVIALAIGAAIASTGGSLFTVSVQ 251

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
            ++P+ F  S   + I + I+GG  S         I++ V     G     
Sbjct: 252 AVTPETFTLSIVFLAIFMPIIGGRNSAWGAPLGALIVVIVTLNMPGYQGSG 302


>gi|224370455|ref|YP_002604619.1| ABC-type branched-chain amino acid transport system, permease
           component [Desulfobacterium autotrophicum HRM2]
 gi|223693172|gb|ACN16455.1| ABC-type branched-chain amino acid transport system, permease
           component [Desulfobacterium autotrophicum HRM2]
          Length = 310

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 106/307 (34%), Gaps = 17/307 (5%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +Y + A G S+V G L +L+      Y IG ++   +   + ++   ++  +
Sbjct: 13  INGITIGGVYALIAIGYSMVYGVLSMLNFAHGELYMIGGFTGWWVLELFSVAHVPVMNAA 72

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +IS    + MG+ +L            + +    N+L+    ++       +  +   +
Sbjct: 73  LLISLMILLAMGVSALLGLVIERVAYRPLRNAPRMNLLLSSLGVSIFIQNFILYFQGAKV 132

Query: 160 GTTVRSLIRFFR---FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                S +       F    V+      +V+L    L   + L ++RT +  + R    +
Sbjct: 133 KVFHISQLIPEGLRTFHIGGVVISFMRIFVMLACFLLMVLLTLIIKRTNVGKSIRATAQD 192

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   +        +  F + SA  G AG   +    ++   +  F   +   +  +LG
Sbjct: 193 IEAAAFMGIDTDKIIVIVFLIGSALGGAAGVLVSLLFTQVDYYV-GFQAGLKGFTAAVLG 251

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+         L     +        +  ++ F             + L  V++ R 
Sbjct: 252 GIGSIPGAMVGGLFLGLCEAMAVTFFPSAYKDVVAF-------------LILIAVLIFRP 298

Query: 337 HSLLRLR 343
             L+  +
Sbjct: 299 QGLMGEK 305


>gi|182677965|ref|YP_001832111.1| urea ABC transporter, permease protein UrtC [Beijerinckia indica
           subsp. indica ATCC 9039]
 gi|182633848|gb|ACB94622.1| urea ABC transporter, permease protein UrtC [Beijerinckia indica
           subsp. indica ATCC 9039]
          Length = 376

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 47/348 (13%), Positives = 94/348 (27%), Gaps = 36/348 (10%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++ +V    L + +       +   M  + L Y   A GL +  G  G+LSL   I + +
Sbjct: 15  IVGIVILSALLIVILPLALDSFRLQMVGKYLTYAFVALGLVLCWGYAGILSLGQGIFFGL 74

Query: 77  GAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           G Y   +                       +                             
Sbjct: 75  GGYCMAMYLKLEASSVENTKIQSTPGIPDFMDWNQLTELPYFWRPFHSFGFTTLAIVAVP 134

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPS 174
           A       F     +   +        +A  L  L    +                 +  
Sbjct: 135 AIFAGIIGFAMFKRRVGGVYFSIITQAIASILTILIIGQQGYTGGINGITDLRTLHGWDI 194

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                +  +Y+V +G+   S  +  +++ + +      +RD +         +   K+  
Sbjct: 195 RTDAAKSILYFVCVGLLLASILLAYYVKSSKLGRILVAMRDKEDRVRFSGYDVANFKVFI 254

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F +S+    + GA F      +SP       +I ++    +GG  SL      T ++   
Sbjct: 255 FCLSAILSAIGGAMFTLQVGFMSPSFVGTVPSIEMVIYCAVGGRLSLLGAVYGTLLVSWA 314

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                               SF       +      V+L+  + L  L
Sbjct: 315 KTSLSE--------------SFPELWLFGLGGLFIAVVLVFPNGLAGL 348


>gi|163852793|ref|YP_001640836.1| urea ABC transporter, permease protein UrtC [Methylobacterium
           extorquens PA1]
 gi|218531619|ref|YP_002422435.1| urea ABC transporter permease UrtC [Methylobacterium
           chloromethanicum CM4]
 gi|163664398|gb|ABY31765.1| urea ABC transporter, permease protein UrtC [Methylobacterium
           extorquens PA1]
 gi|218523922|gb|ACK84507.1| urea ABC transporter, permease protein UrtC [Methylobacterium
           chloromethanicum CM4]
          Length = 393

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 44/362 (12%), Positives = 100/362 (27%), Gaps = 36/362 (9%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           N + K +  +++     + L +       +  ++  + L Y   A GL I  G  G+LSL
Sbjct: 21  NPFMKPVEWVSLALLAGVILVVLPLVLDGFRLNLVGKYLTYAFVALGLVICWGYAGILSL 80

Query: 69  NCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
              + + +G Y   +                       +                   L 
Sbjct: 81  GQGVFFGLGGYCMAMYLKLEASSVENTKIQSTPGIPDFMDWNQITELPWFWHPFQSLPLT 140

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI--------- 167
                                 +            +A  L  L    +            
Sbjct: 141 LLLVVAVPVAFAFLISVAMFKRRVGGTYFAIITQAIAAILTILIVGQQGYTGGINGITDL 200

Query: 168 -RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                +       +  +Y+V  G+      +  +++++ +      +R+ +        +
Sbjct: 201 RTLHGWDIRQDSAKFVLYFVNGGLLIGCILMAQYVKKSKLGRILVAMREKEDRVRFSGYS 260

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +   K+ A+ +++AF  + GA F      +SP       ++ ++    +GG  SL     
Sbjct: 261 VAGFKVFAYCLAAAFAAIGGAMFTLQVGFMSPSFVGIVPSVEMVIYTAVGGRLSLFGAVW 320

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
            T ++                    F  SF       +      V+L+  + L  +    
Sbjct: 321 GTLLVNWAKT--------------SFSESFPDLWLFGLGGLFIAVVLIFPNGLAGIWREH 366

Query: 347 NF 348
             
Sbjct: 367 IE 368


>gi|332526026|ref|ZP_08402164.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2]
 gi|332109869|gb|EGJ10497.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2]
          Length = 307

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 96/305 (31%), Gaps = 10/305 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G + L++        +GA +   + +    S      +
Sbjct: 8   IINGLVLGSMYALVALGYTMVYGIINLINFAHGEVLMVGALTSWTVVTLMADSGLPGWAM 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +      +I    +                       +    +    A I        
Sbjct: 68  MLISLPVAIVICSTLNFTIEKLAYKPLRNAPRLAPLITAMGMSLLLQTIAMIIWKPNPKP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +            +  +    +L     + ++++  + RT +  A R   +N +
Sbjct: 128 YPLLLPTDP----IDLGGPVITVTQCLILGITVVVLSALMYLVNRTKLGRAMRATAENPR 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + F + +    +AG  +AA+   +   M  F   +   +  +LGG+
Sbjct: 184 VATLMGVRPDMVISATFIIGATLAAVAGVMWAANYGTVQHSM-GFLPGLKAFTAAVLGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L+       +L  V  +  G        +L      +        +AL LV+ +R   
Sbjct: 243 GNLAGAVVGGLLLGLVEAIGAGYLGDLTGGVLG-----SHYADIFAFVALILVLTLRPAG 297

Query: 339 LLRLR 343
           LL  R
Sbjct: 298 LLGER 302


>gi|308451205|ref|XP_003088583.1| hypothetical protein CRE_26900 [Caenorhabditis remanei]
 gi|308246494|gb|EFO90446.1| hypothetical protein CRE_26900 [Caenorhabditis remanei]
          Length = 808

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 81/262 (30%), Gaps = 21/262 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               ++  L          + + I ++ +Q  +  + A G++ V+ + G + L+     A
Sbjct: 509 LFSLIILVLFFSFSSPFFFNTENIMTIALQTSVIGIMAIGVTFVIITAG-IDLSLGSVVA 567

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
               +  I  +        +  ++ +++G     +    +        IATL +    + 
Sbjct: 568 FSGVAVGICATLGL--PLPVCIIAGVLAGGMCGYVNGLLVTKMTIPPFIATLGLMMSVR- 624

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                     G   +    R  +                  + Y +F   ++        
Sbjct: 625 ----------GINMVMTDGRAIYFADYPMFKTLAQGRLFDVLPYPVFYLVIVA------L 668

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L++T I      +  N+ A       +   K+  +A      G+AG   A+  + 
Sbjct: 669 VGAYILKKTVIGRYVYAVGSNEVAAHLSGIKVQRVKIFVYAFCGLLTGIAGVILASRLNS 728

Query: 256 ISPDMFKFSENIIVISIVILGG 277
                      +  I+ V++GG
Sbjct: 729 -GQPTVGVGYELEAIAAVVIGG 749


>gi|126464762|ref|YP_001045875.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
 gi|126106573|gb|ABN79103.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
          Length = 332

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 59/310 (19%), Positives = 118/310 (38%), Gaps = 29/310 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS      +   AY        +G      I +   
Sbjct: 45  FLMKLLCFALFAAAFNLLLGYTGLLSFGHATFFGGSAYFTAHAVKVWGWPPEFGILLGVA 104

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            + A G++MG+ +++ +G Y A+ TL +S++F    ++                      
Sbjct: 105 GAAALGLLMGVIAIRRQGIYFAMITLALSQMFFFFCLQAAFTHG--------------ED 150

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++S+ R   F    +     MY+ +LG   L    I     +      + IR+N+    
Sbjct: 151 GIQSVPRGHLFGVIDLSNATNMYFFVLGTFTLGMLAIWRFVNSPFGMILKAIRENEPRAI 210

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL  ++   KL AF +S+A  G+AG   A      +     +  +  VI + +LGG+ +L
Sbjct: 211 SLGYSVAEYKLGAFVMSAALAGLAGGVKALVFQFATLTDVGWQMSGEVILMTLLGGIGTL 270

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                 +A+++ +        F                 T +  +     +L+    ++ 
Sbjct: 271 VGPVVGSALVVTLQNYLATSQFPV---------------TIITGLVFMACVLLFRRGIVG 315

Query: 342 LRTPSNFLER 351
               S    R
Sbjct: 316 EFYASRLGRR 325


>gi|311695947|gb|ADP98820.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [marine bacterium HP15]
          Length = 307

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 93/297 (31%), Gaps = 16/297 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--------YVILGSRYGL 90
           + +       Y + A G ++V G +G+++      Y IGAY+          +  +   L
Sbjct: 11  LINGLTIGSTYALIAIGYTMVYGIIGMINFAHGEIYMIGAYTALIAITGLAALGIAWLPL 70

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + + +  + ++S + G  +   + +       +  LI +      L  +  +  G    
Sbjct: 71  ILIVALLCAMIVSSSMGWAVERVAYRPVRGRHRLIPLISAIGMSIFLQNYVHLAQGS--- 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R       +     F       +        + +       ++ L++ R+    A 
Sbjct: 128 ----RNIGFPALIDGGFNFGSGDGFQMSLSYMQITIFITTLICMTALSLFISRSRTGRAC 183

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +  +      L         + F + +A   +AG         +   +F F   +   
Sbjct: 184 RAVSQDLGMANLLGIDTNRIISATFVIGAALAAVAGLLLGMYYGSVD-PLFGFIAGLKAF 242

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  +LGG+ S+        IL     +  G     +  ++ F     +       + 
Sbjct: 243 TAAVLGGIGSIPGAMLGGLILGVAESMTSGYLSGEYKDVISFSLLILILLFKPTGLL 299


>gi|293604939|ref|ZP_06687336.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292816767|gb|EFF75851.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 290

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/315 (13%), Positives = 93/315 (29%), Gaps = 26/315 (8%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
            L        + +      +Y + A GL+++ G L +++     A  +  Y+  +L  R 
Sbjct: 1   MLDPAILFSSVLNGLTTGAVYALIALGLTLIYGVLHIINFAHGAALMVALYAVYLLKERL 60

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           G+  +  +P+      A G  +    +           L+++     +L     +     
Sbjct: 61  GIDPYAALPLVVAGMFALGYALQRFVINRASHGKDENILLVTLGLAIVLENLALVWFKSD 120

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                         + +            +  +       G   ++A +   +R T +  
Sbjct: 121 TRS-----------IDTAYTLSTVEIGPAMIALPKVIAFCGALAVAAVLFWIIRSTDLGR 169

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           A R +   ++    +   +      +F +  A +G A  F   +              ++
Sbjct: 170 AIRAVAREKQGAKLMGIDVEKVYALSFGIGMACLGAAACFLLPAYYV--NPQVGSGFVLV 227

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
             +IV+LGGM S         ++  V  +           +              +    
Sbjct: 228 AFTIVVLGGMGSFVGALVGGLLIGVVESIGGLFLGDSLGQMG-------------IFAIF 274

Query: 329 FLVILMRSHSLLRLR 343
             V+L R   L   R
Sbjct: 275 IAVLLFRPQGLFGAR 289


>gi|171315803|ref|ZP_02905035.1| inner-membrane translocator [Burkholderia ambifaria MEX-5]
 gi|171099102|gb|EDT43882.1| inner-membrane translocator [Burkholderia ambifaria MEX-5]
          Length = 295

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 55/308 (17%), Positives = 105/308 (34%), Gaps = 19/308 (6%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             +I  +     +Y   A GL++  G  GL++   V    +G Y+  I  S+ G  +   
Sbjct: 2   SSFIVHLLTIACLYATMALGLNLQAGYAGLVNFGFVAFAGLGGYAAGI-ASQLGWPLPAA 60

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + ++A  +    + +         DY  IATL ++EI +   +    +T G  GI     
Sbjct: 61  LALAAGAASVLAVAIARLGRHLSADYWGIATLAIAEILRTFALNEGWLTGGAQGIGGIAP 120

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           L+       +               +    V  G   ++ +    L       A + +R+
Sbjct: 121 LFPGLRAPWAD--------------LAFLAVAAGSLAVAYAACRLLTTGRFGRALKVMRE 166

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
                       +  K  A    +     AGA        + PD    SE   + +IV++
Sbjct: 167 EPALAVCFGYDPVALKTWASVAGALPAAFAGALLTWYISYVGPDTMVASETFALWTIVMV 226

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S + +     I+    +    +  +  + L             L+ + L   +L R
Sbjct: 227 GGLGSHAGVLAGALIV----QAVYAVAPFLKDWLGVGSDLAGAVRLGLVGLMLLACVLWR 282

Query: 336 SHSLLRLR 343
              L+  R
Sbjct: 283 PRGLVPER 290


>gi|158424566|ref|YP_001525858.1| branched-chain amino acid ABC transporter permease protein
           [Azorhizobium caulinodans ORS 571]
 gi|158331455|dbj|BAF88940.1| branched-chain amino acid ABC transporter permease protein
           [Azorhizobium caulinodans ORS 571]
          Length = 305

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 100/313 (31%), Gaps = 30/313 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89
           + +      IY + A G ++V G +G+++      + + ++         + V+  S   
Sbjct: 8   LINGLTLGSIYGLIAIGYTMVFGIIGMVNFAHGDVFMVSSFIGLIAFLLLTTVLGISSIF 67

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L + +++ V+ + +G     +   + +       +A +I +     +L  +  +  G   
Sbjct: 68  LVLAIVLVVAMLFTGLLSWTIERVAYRPLRGSFRLAPMISAIGMSILLANFVQVAQGPRN 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             +          +  +I         V        ++     L A     +++T +  A
Sbjct: 128 KPLPP-------IIPDVIVLMDNNGYQVTLAYKQIVIMAVTVALLAGFWYLVQKTPLGRA 180

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +    +AG  +      ++ +   F   +  
Sbjct: 181 QRACEQDRKMAALLGVDVDRTISLTFVIGAMLAAVAGTMYLMYYGVVNFND-GFVPGVKA 239

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +           +  +  F               L 
Sbjct: 240 FTAAVLGGIGSLPGAVLGGLLIGLIETFWSAYFSIEYKDVAAFS-------------ILA 286

Query: 330 LVILMRSHSLLRL 342
           + ++     LL  
Sbjct: 287 ITLIFMPQGLLGR 299


>gi|332560904|ref|ZP_08415222.1| ABC branched-chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides WS8N]
 gi|332274702|gb|EGJ20018.1| ABC branched-chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides WS8N]
          Length = 332

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 58/310 (18%), Positives = 117/310 (37%), Gaps = 29/310 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS      +   AY        +G      I +   
Sbjct: 45  FLMKLLCFALFAAAFNLLLGYTGLLSFGHATFFGGSAYFTAHAVKVWGWPPEFGILLGVA 104

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            + A G++MG+ +++ +G Y A+ TL +S++F    ++                      
Sbjct: 105 GAAALGLLMGVIAIRRQGIYFAMITLALSQMFFFFCLQAAFTHG--------------ED 150

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++S+ R   F    +     MY+ +L    L    I     +      + IR+N+    
Sbjct: 151 GIQSVPRGHLFGVIDLSNATNMYFFVLSTFTLGMLAIWRFVNSPFGMILKAIRENEPRAI 210

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL  ++   KL AF +S+A  G+AG   A      +     +  +  VI + +LGG+ +L
Sbjct: 211 SLGYSVAEYKLGAFVMSAALAGLAGGVKALVFQFATLTDVGWQMSGEVILMTLLGGIGTL 270

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                 +A+++ +        F                 T +  +     +L+    ++ 
Sbjct: 271 VGPVVGSALVVTLQNYLATSQFPV---------------TIITGLVFMACVLLFRRGIVG 315

Query: 342 LRTPSNFLER 351
               S    R
Sbjct: 316 EFYASRLGRR 325


>gi|170738022|ref|YP_001779282.1| urea ABC transporter, permease protein UrtC [Burkholderia
           cenocepacia MC0-3]
 gi|169820210|gb|ACA94792.1| urea ABC transporter, permease protein UrtC [Burkholderia
           cenocepacia MC0-3]
          Length = 389

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 92/334 (27%), Gaps = 36/334 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI------- 83
                  +  ++  + L Y   A GL I  G  G+LSL   + + +G Y+  +       
Sbjct: 50  FPLALDTFRLNLMGKYLTYAFVAIGLVIAWGYGGVLSLGQGVFFGLGGYAMAMFLKLEAS 109

Query: 84  -----LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
                           +                          +    L     +     
Sbjct: 110 DAAATHTQTTPGIPDFMDWNQLTALPTWWKPFHSLPFSILAVLVVPTALAFVIGYAMFKR 169

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLL 188
           +   +        VA  L  L    +                 +       ++ +Y+V  
Sbjct: 170 RVGGVYFAIITQAVALILSVLIIGQQGYTGGVNGITDLRTLLGWDIRTDHAKLVLYFVNA 229

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +   +  +  W++R+ +      +RD +         +   K+ AF +++    + GA 
Sbjct: 230 ALLIGALLVGRWVQRSKLGTLLLAMRDKEDRVRFSGYDVAMFKVFAFCLAAMLAAIGGAM 289

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           F      +SP       +I ++    +GG  SL        ++                 
Sbjct: 290 FTLQVGFMSPSFVGIVPSIEMVIYAAIGGRMSLVGAVYGAILVNLGKSW----------- 338

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              F  SF      LM      V+++  + L  L
Sbjct: 339 ---FSESFPNLWLYLMAAMFIGVVMVFPNGLAGL 369


>gi|111220267|ref|YP_711061.1| high-affinity branched-chain amino acid transport system permease
           braE [Frankia alni ACN14a]
 gi|111147799|emb|CAJ59462.1| high-affinity branched-chain amino acid transport system permease
           protein braE [Frankia alni ACN14a]
          Length = 723

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 53/320 (16%), Positives = 111/320 (34%), Gaps = 19/320 (5%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +   +    +              + L   +      ++ G +G LSL  +    +  + 
Sbjct: 337 LLLGVPVGVVALLLLTGSWRLGLERSLAGAVVCLSFVVLTGYVGQLSLAQMSLAGVAGFL 396

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
              L    G+   +   ++   +   G+ +G+ S + RG  LA+ TL+     Q  +   
Sbjct: 397 LARLEGELGVPFPIAPLIATFAAAVAGLFLGVVSRRLRGVDLALITLVAGVAIQEAVFGN 456

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G AG  V +   F      S   F R              + L +       +  
Sbjct: 457 PLVTGGLAGSSVPNPKIFGLDLGLSGAGFPRVQFG---------LLALSVLAAGGYGVAR 507

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           LR   +      +R N+++  +    +   K+ AF +S+A  G+ G      + R+S D 
Sbjct: 508 LRTADLGRRMLAVRANERSAAAAGIDVRRTKVLAFTLSAALAGLGGCLIGYGQGRLSFDS 567

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F  + ++  ++I  +GG+TS+        +                 + L          
Sbjct: 568 FGVTASLFFLAIAAVGGVTSVGGALVGGLL----------APGGLAFTALDRVAGLGEYQ 617

Query: 321 TTLMVIALFLVILMRSHSLL 340
             L  +A+ ++ ++R   L+
Sbjct: 618 QLLCGLAVVVLAVLRPAGLV 637



 Score = 47.6 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/291 (9%), Positives = 70/291 (24%), Gaps = 8/291 (2%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM- 101
                +Y     GL +   + G++++          Y Y  L     L + ++     + 
Sbjct: 17  LGPGAVYAALGLGLVLTYRASGVVNIAHGAFAMYATYQYAELREVGDLVLPVVGLPPRIH 76

Query: 102 -----ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                  G    +    +         +    +      + +                + 
Sbjct: 77  LTDTPTFGLALSVSLAMAALLALASYLLVFRPLRRAQPMMTVVAAVGLTIALQAVAVVQF 136

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +  ++         V        +   +   +A +    R T    A R + D+
Sbjct: 137 GSDNRFLAPVLAQSPLHLLGVTVPSDRLLLAGLVVVAAAGLWAMSRWTMFGLATRAVADD 196

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    L     +   + + +++    +AG   A                +  I+  +LG
Sbjct: 197 AETTALLGRRPGWIAATNWMLAAVLAALAGILVAP--ISALNPTSYSLFVVPAIAAALLG 254

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           G++S          L         +             +       L V  
Sbjct: 255 GLSSFGLTVAGALGLGVAQGFLLPLQQDVGWLNQPGLRALLPMILVLAVAG 305


>gi|121611025|ref|YP_998832.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121555665|gb|ABM59814.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 325

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 54/307 (17%), Positives = 120/307 (39%), Gaps = 26/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +  +  Q +IY +FA G+ +++   GL+S    + +    Y   ++ +   +     IPV
Sbjct: 29  LLGVLTQAVIYAIFALGVGVLLRQSGLVSFGHALFFGAAGYGMGVVLALDWMPAEAAIPV 88

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +  G    ++GL  ++  G    + TL + ++   +  + + +T G  G+ +      
Sbjct: 89  VLLAIGVLAFLIGLVIVRVPGIAFGMLTLAIGQMAYLLAFRARGLTGGADGMGIHWPAT- 147

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                      F +  S ++    ++ +      L+  ++L++ RT        IRDN++
Sbjct: 148 ----------LFGYSQSALLKPATVFLIAWVSMVLTTVLLLFILRTRFGAITEAIRDNEE 197

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +       + + +A+S+   G+AG   + +   +SP+   +S + I + +VI+GG 
Sbjct: 198 RARFIGIGTTAPRAAVYALSAVVAGIAGILSSLNTGFVSPENLHWSVSAITLLMVIVGGF 257

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L+       + +   +L  G   +                  L   AL  VI+   H 
Sbjct: 258 EKLAGPIIGAIVYVMFKDLLGGYATH---------------SMALFGAALIAVIVFSPHG 302

Query: 339 LLRLRTP 345
           +      
Sbjct: 303 IAGALER 309


>gi|312793573|ref|YP_004026496.1| inner-membrane translocator [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180713|gb|ADQ40883.1| inner-membrane translocator [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 294

 Score = 79.1 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 90/289 (31%), Gaps = 10/289 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + + G ++V G + L++      + +GAY   +  +   L +   + +
Sbjct: 8   LINGITLGSVYALISLGYTMVYGIIKLINFAHGDIFMVGAYIAYLSVTYLKLGLIPSLIL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S       GM++   + K   +   I+ LI +     +L     I  G         +  
Sbjct: 68  SMTFCSVLGMLIEKFAYKPLRNSPRISALITAIGVSLLLENLMQIIMGADSRVFPRLVDE 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +            +++    +  ++L             ++T I  A R +  +  
Sbjct: 128 KNYHLLQGRIVVNNKQIYLLIITILLMIILNFVV---------KKTKIGKAMRAVSQDMD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA    AG       + I+P M      +      + GG+
Sbjct: 179 AARLMGINVDTTISYTFAIGSALAAAAGVLVGLYYNTINPLM-GVLPGLKAFIAAVFGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +         L  +  L  G     +   + F     +       + 
Sbjct: 238 GIIPGAMLGGFSLGIIETLVSGYGSSMYKDAVAFALLILILIIKPSGLL 286


>gi|228927030|ref|ZP_04090096.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228933267|ref|ZP_04096123.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|229121516|ref|ZP_04250743.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus 95/8201]
 gi|228661980|gb|EEL17593.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus 95/8201]
 gi|228826428|gb|EEM72205.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228832765|gb|EEM78336.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
          Length = 317

 Score = 79.1 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 59/322 (18%), Positives = 128/322 (39%), Gaps = 31/322 (9%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY   +
Sbjct: 2   LICLSVFPFVNDSRSLLILFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVAL 61

Query: 84  LGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           L  R      + ++ I  + +IS     I+GL SL+ +  + A+ TL +S++F  +  KW
Sbjct: 62  LFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKW 121

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T+G  G        F                         YYV L    +   ++  
Sbjct: 122 RGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVLLRL 162

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++  +
Sbjct: 163 FTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVNTTV 222

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F     +  + + ++GG+ +L            +       +  Y+ S L  +     R 
Sbjct: 223 FSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIFERW 273

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
           T ++ +   +V+L+    L+  
Sbjct: 274 TIILGLLYIIVLLVFPKGLVGT 295


>gi|229820690|ref|YP_002882216.1| inner-membrane translocator [Beutenbergia cavernae DSM 12333]
 gi|229566603|gb|ACQ80454.1| inner-membrane translocator [Beutenbergia cavernae DSM 12333]
          Length = 492

 Score = 79.1 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 83/306 (27%), Gaps = 24/306 (7%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            S  +  L+  + + GLS++ G+ GL + +      +G     I    +GLS++L   V+
Sbjct: 209 LSGLVFGLLLALASVGLSLIYGTTGLSNFSHGELVTLGGIVAYIAAQWWGLSLFLAGLVA 268

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            ++    G                  T  M       +     +     G          
Sbjct: 269 VVVGAIMGYAQNAVLWAPLRRRGVGITQQMIVTIGLAVALQYALHLIVGGNP-------- 320

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                S           V         +     + A++   L  T +  A R + DN   
Sbjct: 321 --LRISTANPPIIDLGPVRITQTSAISVGIAVVVLAAMAYVLLATRVGRATRAVSDNPAL 378

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +    +       +   +A   + G       +  +      +  +++ + V LGG+ 
Sbjct: 379 ASASGIDVESIVRGVWVTGAALAALGGTLLGLYLN-ATRWNTGTTLLLLMFAAVTLGGLG 437

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           +       +  +  VVEL   +                +                R   +
Sbjct: 438 AAMGALVGSIAIGLVVELSTLVLPSDMRYASALVILILVLL-------------FRPQGI 484

Query: 340 LRLRTP 345
           L     
Sbjct: 485 LGRAER 490


>gi|91789191|ref|YP_550143.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91698416|gb|ABE45245.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas sp. JS666]
          Length = 309

 Score = 79.1 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 101/308 (32%), Gaps = 8/308 (2%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            +YI +  +  +IY M A G ++  G L ++  +      +GA++  +  S   ++I L 
Sbjct: 5   SQYIFNGLMLGVIYAMVAVGFTLFFGVLDVIKFSHGDTLMVGAFA-GLTVSIVMMNIGLA 63

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
            P   +++     +     L        I  L  +     +L      T  +  + +   
Sbjct: 64  SPALQLLAVVVFAVAVTGLLGAGIAKFLILPLRHAPPLNTLLATLMLGTVMREAVRLFYP 123

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                    +L+         +   I    +L       A + L + RT +  A R +  
Sbjct: 124 DGSNPKPFPALLPTSMVELGGLSLRIDNLILLASGLLAIAGVHLLITRTKLGMAIRAVAQ 183

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           + +    +        L  FA+ S    +AG       + ++ ++      +I  +  IL
Sbjct: 184 DGETARLMGINFEAVVLITFALGSGLAALAGVMNGLYYNEVNFNV-GLLLGVIGFAAAIL 242

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++        +   +  +   M       +       +         A+ + +  +
Sbjct: 243 GGLGNIYGAIIGGFLFAALQVIGSAMLPTLIPDI------PSSYKDVFAFAAVIIFMAWK 296

Query: 336 SHSLLRLR 343
              L+  +
Sbjct: 297 PTGLIAEK 304


>gi|75906691|ref|YP_320987.1| inner-membrane translocator [Anabaena variabilis ATCC 29413]
 gi|75700416|gb|ABA20092.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Anabaena variabilis ATCC 29413]
          Length = 316

 Score = 79.1 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 47/319 (14%), Positives = 102/319 (31%), Gaps = 31/319 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY--------------VIL 84
           + +      +Y +FA G ++V   LG+++L     + +GAY                   
Sbjct: 10  LLNGLSIGSVYAIFALGYTLVYSILGIINLAHGAIFTLGAYFTYALMGGTFGFNGLLANA 69

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                L   + + + + ++G  G+ M   + +      +   L +       ++    I 
Sbjct: 70  TLPIQLPFAVALIIGSSLAGLVGVAMERIAFQPLRKKGSDTLLTVVSSLGVAVVIVNIIQ 129

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                          G         F      +        +      + A +  ++  T
Sbjct: 130 YLVGAESYTFPANTFGN--LPPAFNFGTLEKPIPIRSVQVVIFTVSVVIVAILTYFINCT 187

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
               A + I ++      L        +  F +SS   G+AG   A+S   I+   F   
Sbjct: 188 KYGKAIQAIAEDATTASLLGINSDRFIVLTFFISSFLAGLAGTLVASSV-SIAGPYFGIG 246

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
             +  +++++LGG+ S+        ++  V  L                  ++     + 
Sbjct: 247 FGLRGLAVIVLGGLGSIPGAVLGGLLIGVVEALV--------------PSDYSGYKDAVA 292

Query: 325 VIALFLVILMRSHSLLRLR 343
              LF+++L+R   LL  R
Sbjct: 293 FGILFIMLLVRPQGLLGRR 311


>gi|242241265|ref|YP_002989446.1| branched-chain amino acid transporter permease subunit LivH
           [Dickeya dadantii Ech703]
 gi|242133322|gb|ACS87624.1| inner-membrane translocator [Dickeya dadantii Ech703]
          Length = 308

 Score = 79.1 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 99/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +        
Sbjct: 12  MFNGLTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDTSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +IS A G  +   + K   D   +  LI +      L  +  +T G    
Sbjct: 72  LIGTAFIAAVVISSAYGWSIERVAYKPVRDSKRLIALISAIGMSIFLQNYVSLTQGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L + ++                     + +       ++ L++R + +  A 
Sbjct: 129 ----RDVALPSLIQGQWVLGESNGFAATITTMQLTIWVVTFLAMLALTLFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L  +        F + +    +AG         I+P    F   +   
Sbjct: 185 RACSEDLKMTSLLGISTDRVISLTFIIGATMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L     L        +  ++ F               L +
Sbjct: 244 TAAVLGGIGSIPGAMIGGLVLGITEALTSAYLSTEYKDVVSF-------------ALLIV 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|199599626|ref|ZP_03213006.1| Branched-chain amino acid ABC-type transport system, permease
           component [Lactobacillus rhamnosus HN001]
 gi|258507309|ref|YP_003170060.1| branched-chain amino acid ABC transporter permease [Lactobacillus
           rhamnosus GG]
 gi|258538491|ref|YP_003172990.1| branched-chain amino acid ABC transporter permease [Lactobacillus
           rhamnosus Lc 705]
 gi|199589481|gb|EDY97607.1| Branched-chain amino acid ABC-type transport system, permease
           component [Lactobacillus rhamnosus HN001]
 gi|257147236|emb|CAR86209.1| ABC transporter, branched-chain amino acid transporter permease
           protein [Lactobacillus rhamnosus GG]
 gi|257150167|emb|CAR89139.1| ABC transporter, branched-chain amino acid transporter permease
           protein [Lactobacillus rhamnosus Lc 705]
 gi|259648666|dbj|BAI40828.1| branched-chain amino acid ABC transporter permease component
           [Lactobacillus rhamnosus GG]
          Length = 292

 Score = 79.1 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 89/288 (30%), Gaps = 12/288 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A G ++V G + L++      Y +GA+      +         +  
Sbjct: 8   IINGLSLGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFWGYYAINYLHFGFVTALLS 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++   G+++   + +   +   IA LI +      L        G            
Sbjct: 68  AMLMASLSGVLIEYLAYRPLRNSPRIAALITAIGVSFFLENGMSFLFGAN---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I    +    V        +L     L   +   +++T +  A R +  + +
Sbjct: 118 -ARNFPQVIATKTYHLGGVDISNVQLLILFTSLVLMILLQFIIKKTTMGKAMRAVAVDPQ 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +           FA+ SA  G AG       + I P M      I      ++GG+
Sbjct: 177 AAQLVGINPDHVISFTFALGSALAGAAGVMIGLYYNSIDPLM-GMVPGIKAFVAAVVGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            S+   A    ++  +      +    +     +     +       +
Sbjct: 236 GSIPGAAIGGFLIGLLETGVQAIGLSAYKDAAVYLVLILVLVVLPAGL 283


>gi|311103937|ref|YP_003976790.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310758626|gb|ADP14075.1| inner-membrane translocator 14 [Achromobacter xylosoxidans A8]
          Length = 321

 Score = 79.1 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 118/326 (36%), Gaps = 32/326 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  LL+   L     Q       +++L + +FA   +++ G  GL+S      +    Y
Sbjct: 10  ILALLLVPALLVPFFPQIVYPVFVMKVLCFALFALAFNLLTGFTGLVSFGHAAFFGWAGY 69

Query: 80  SYVILGSRYGLSIW---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           +   +   +G       + +     ++ A G  +G  +++  G Y A+ TL +S++   +
Sbjct: 70  AAGEMMILFGARGLPPEIAMACGVAMAAAIGYAIGWLAIRRTGIYFAMITLALSQVAYFM 129

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            ++                       ++ + R        +  +  MYY  LG+  L   
Sbjct: 130 AVQVGWTRG--------------EDGMQGIPRGKFLGLVDLSVDANMYYFALGVFVLGFL 175

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  +  +      +TIRDN     SL       KL AF +S+A  G+AG+  A     +
Sbjct: 176 FVYRVIHSPFGQVLKTIRDNAPRAISLGYDTDRCKLLAFVLSAAVAGLAGSLKALVLQLV 235

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +    + +  V+ + +LGG+ ++        +++ +      +               
Sbjct: 236 ALNDVSLATSTEVLLMTLLGGIGTVWGPVVGATLVVSLQNYLATLGDVV----------- 284

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
               T ++ +   L +       +  
Sbjct: 285 ----TIVIGLIFVLCVSFFRRGFVGE 306


>gi|325962598|ref|YP_004240504.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468685|gb|ADX72370.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 322

 Score = 79.1 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 54/294 (18%), Positives = 118/294 (40%), Gaps = 6/294 (2%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           +  G  GLL+       A+GAY + I    +G+  ++ + ++ + S    +++G+P+L+ 
Sbjct: 31  VHFGYSGLLNFGQAGFMAVGAYGFAISTLTFGVPFFVGLLIAVIASAIFALLLGIPTLRL 90

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           R DYLAI T+  +EI + I+   +  +   +   +A                +   ++  
Sbjct: 91  RADYLAIVTIAAAEIVRYIVTTNQLTSVTGSANGLAAFEGGFYAMNPFPEGSYFGMNNRD 150

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
            +   + + L+ +C     ++    R+      + IR+++ A  SL   +   K+ A  +
Sbjct: 151 FFIRVVGWALVALCCTLVWLL---MRSPWGRVLKGIREDENAVRSLGKNVYAYKMQALII 207

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
                 +AG  F   R  + P  +       + + ++LGG+ ++        I   V+ L
Sbjct: 208 GGVLGALAGMVFTLPRGAVQPANYGTELTFFLYTCLLLGGLGTVLGPVIGAMIFWVVLSL 267

Query: 298 CCGMNFYYFNSLLKFDC---SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             G+ +    S                 L+ +AL L+++ R   +   +    F
Sbjct: 268 TQGVLYGLIESGAITWLNTVQAGQLRYILVGVALMLLMIFRPQGVFGNKKELAF 321


>gi|152986147|ref|YP_001350901.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           aeruginosa PA7]
 gi|150961305|gb|ABR83330.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas aeruginosa PA7]
          Length = 529

 Score = 79.1 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 43/295 (14%), Positives = 87/295 (29%), Gaps = 31/295 (10%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL----SIWLLIPVSAMISGACGMIMGLP 113
           I  G LG++++       +GAYS  ++           + L   ++  ++      +G+ 
Sbjct: 256 ITYGLLGVINMAHGEMLMLGAYSTYVVQLLLQRLAPEWLALYPLLALPVAFCVSAAIGMA 315

Query: 114 SLKFRGDYLAIAT---LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
             +    +L       L+ +     +LI+   +  G   + VA+            +   
Sbjct: 316 LERTVIRHLYGRPLETLLATWGISLVLIQLVRVLFGAQNVEVANPA---------WLSGG 366

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                 ++       ++    F+     L L RT +    R +  N+             
Sbjct: 367 IQVLPNLVLPWNRIVIIGFALFVLLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVPTGRV 426

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
            + AF + S   G+ G   A S+             I    +V+LGG+  L+    A   
Sbjct: 427 DMLAFGLGSGIAGLGGV--ALSQVGNVGPDLGQGYIIDSFLVVVLGGVGQLAGSVLAAFG 484

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           L    ++           +L                        R   L  L+  
Sbjct: 485 LGVANKVLEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526


>gi|148256624|ref|YP_001241209.1| high-affinity branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. BTAi1]
 gi|146408797|gb|ABQ37303.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 305

 Score = 79.1 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 101/312 (32%), Gaps = 28/312 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGL 90
           + +  +   IY + A G ++V G +G+++      + IG +  +I          +   +
Sbjct: 8   LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDVFMIGGFIALISFLVLVSVGLTAVPV 67

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + +++ VS  I+   G  +   + +       +A ++ +     +L  +  ++ G    
Sbjct: 68  ILLIVLLVSMAITALYGWTIERIAYRPLRHSFRLAPMLSAIGMSFVLTNFSQVSQGARVK 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            V   +    T       F    S+  I  +    VLLG           + RT +    
Sbjct: 128 PVPPIVTGGYTLHEGESGFVVQLSNIQIVVVITTIVLLG------LFTWLVSRTRLGRDM 181

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    +Q     L   +       F + +A   +AG  +      +   M  F   I   
Sbjct: 182 RACEQDQTMAALLGVDVDRTISMTFVIGAALAAVAGMMYLLYYGLVDFFM-GFVAGIKAF 240

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ SL         +  +           +  +  F               L +
Sbjct: 241 TAAVLGGIGSLPGAMLGGLAIGLIETFWSAYFSVEYKDVAAFS-------------ILIV 287

Query: 331 VILMRSHSLLRL 342
           V++     LL  
Sbjct: 288 VLIFMPTGLLGR 299


>gi|114319352|ref|YP_741035.1| inner-membrane translocator [Alkalilimnicola ehrlichii MLHE-1]
 gi|114225746|gb|ABI55545.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Alkalilimnicola ehrlichii MLHE-1]
          Length = 364

 Score = 79.1 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 48/340 (14%), Positives = 101/340 (29%), Gaps = 28/340 (8%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           +           ++ ++  + L   + A  L ++ G  G+LSL     +A+G Y+  +  
Sbjct: 38  VVPPDSFFYMPNWMVTLLGRFLCLALVALALDLIWGYTGILSLGHGAFFAVGGYAMGMHL 97

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           +R       +      +  +       P   F    L +             + ++    
Sbjct: 98  TRNTYEEGSVPNFIQFLGMSDWPWFWAPFEYFWATALLVVLAPGLLALVFGFLAFRSRVR 157

Query: 146 GKAGIYVADRLYF--------------LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           G     +   L F                T + +      F        + +Y +   + 
Sbjct: 158 GVYFAIITQALTFALMLLFFRTETGLGGDTGLTNFQEVLGFSLRSNDARLTLYLLSGVVL 217

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+  +  ++  + +      IRD +          +  KL  +  S+   G+AGA +  
Sbjct: 218 ILAYLLCRFIVTSKLGRVLTAIRDAESRVRFTGYNPLRYKLFVWTFSAMLCGLAGALYVP 277

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               I+P     + +I +   V LGG  +L        I+ G                  
Sbjct: 278 QTGVINPGEMAPAVSIEMAVWVALGGRGTLVGALAGAGIVNGAKSW-------------- 323

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           F  ++       +     LV L     ++ L       +R
Sbjct: 324 FTAAYPELWLFFLGALFILVTLFLPRGVVGLFDRLRKEKR 363


>gi|77465298|ref|YP_354801.1| ABC branched-chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|77389716|gb|ABA80900.1| ABC branched-chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
          Length = 332

 Score = 79.1 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 59/310 (19%), Positives = 118/310 (38%), Gaps = 29/310 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS      +   AY        +G      I +   
Sbjct: 45  FLMKLLCFALFAAAFNLLLGYTGLLSFGHATFFGGSAYFTAHAVKVWGWPPEFGILLGVA 104

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            + A G++MG+ +++ +G Y A+ TL +S++F    ++                      
Sbjct: 105 GAAALGLLMGVIAIRRQGIYFAMITLALSQMFFFFCLQAAFTHG--------------ED 150

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++S+ R   F    +     MY+ +LG   L    I     +      + IR+N+    
Sbjct: 151 GIQSVPRGHLFGVIDLSNATNMYFFVLGTFTLGMLAIWRFVNSPFGMILKAIRENEPRAI 210

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL  ++   KL AF +S+A  G+AG   A      +     +  +  VI + +LGG+ +L
Sbjct: 211 SLGYSVAEYKLGAFVMSAALAGLAGGVKALVFQFATLTDVGWQMSGEVILMTLLGGIGTL 270

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                 +A+++ +        F                 T +  +     +L+    ++ 
Sbjct: 271 VGPVVGSALVVTLQNYLATSQFPV---------------TIITGLVFMACVLLFRRGIVG 315

Query: 342 LRTPSNFLER 351
               S    R
Sbjct: 316 EFYASRLGRR 325


>gi|255261922|ref|ZP_05341264.1| hydrophobic amino acid ABC transporter [Thalassiobium sp. R2A62]
 gi|255104257|gb|EET46931.1| hydrophobic amino acid ABC transporter [Thalassiobium sp. R2A62]
          Length = 316

 Score = 79.1 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 93/323 (28%), Gaps = 16/323 (4%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR- 87
             G      Y+    +   IY + A G+++  G L   +        +GAY    + +  
Sbjct: 4   AFGFEFVNFYLIPGLVLGCIYALGAIGITLTFGILRFANFAHGELMMMGAYLTWTIMAII 63

Query: 88  -----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
                  +   +    ++++             K       I  ++ S     IL     
Sbjct: 64  TAVIGITVHPLIAAIPASIVVIYLFFWTDKFFYKPFRKADTIKVVMASFGMMLILRSAVQ 123

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +  G   +     +      + S         + ++       +  G       +   L 
Sbjct: 124 VIWGPNQLTFVPGIAKPNAGLMSWTDDIG---AILLIPNKHLLIFAGTIVFVVVLSYILN 180

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           RT I  A R + D+          +     + + V       AG F A     +   M  
Sbjct: 181 RTRIGKAMRAVSDSPDLAHVTGIDVDQVIRATWIVGGVCALAAGVFLAMDIQLLETTM-G 239

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F   + + +  ILGG+           I+    EL        +  +           T 
Sbjct: 240 FRMLLPMFAAAILGGIGKPYGAVAGGLIIGLAEEL------SAYPWIGTEPLLSPGYKTG 293

Query: 323 LMVIALFLVILMRSHSLLRLRTP 345
           +    + +++++R   L + R+ 
Sbjct: 294 VAFAIMVVMLILRPQGLFKGRSF 316


>gi|288574273|ref|ZP_06392630.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570014|gb|EFC91571.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 288

 Score = 79.1 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 59/305 (19%), Positives = 105/305 (34%), Gaps = 25/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + + GL++V G LG+L +     Y  GAY   I       +IWL I V
Sbjct: 8   LLNGLATGATYALISLGLALVYGVLGVLHVAHAGVYMAGAYI-GIGVYSVTGNIWLAIIV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++ G  G+ +          Y     LI S      + +   +  G +          
Sbjct: 67  SMIVCGFIGVAIERLVYFPLLKYPPYVPLISSIAIFTGMEELVRLVAGPS---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T    + F  F    +     +  + +    +   +     +T    A R    +  
Sbjct: 117 -VQTFSLELPFPSFDLGGIHVSSNLMGIYVITAVVFFILWFITTKTETGLAMRAASQDMP 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              ++     F    +F VSSA   +AG       + +SPDM         ++++++GG+
Sbjct: 176 IAGAMGIDSRFMVDFSFFVSSAVAALAGILVGIYYNTVSPDM-GAIPAYKALALIVVGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A+  L     L  G                 +    L  IA+ +V++ R   
Sbjct: 235 GSVPGAVVASLSLGVAETLLIGYAG------------IPLPRDALAFIAMIVVLMWRPQG 282

Query: 339 LLRLR 343
           LL  R
Sbjct: 283 LLGKR 287


>gi|330817551|ref|YP_004361256.1| inner-membrane translocator [Burkholderia gladioli BSR3]
 gi|327369944|gb|AEA61300.1| inner-membrane translocator [Burkholderia gladioli BSR3]
          Length = 392

 Score = 79.1 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 49/365 (13%), Positives = 96/365 (26%), Gaps = 36/365 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L +         +V   +L + +       +  ++  + L Y   A GL I  G  G+LS
Sbjct: 29  LARRADASGYAGIVLLAILIVVVFPLALDAFRLNLMGKYLTYAFVAVGLVIAWGYGGVLS 88

Query: 68  LNCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           L   + + +G Y+  +                       +         A          
Sbjct: 89  LGQGVFFGLGGYAMAMFLKLESSDPVSTRTQTTPGIPDFMDWNQLTALPAWWKPFHSLPF 148

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNG----------KAGIYVADRLYFLGTTVRS 165
                 +    L     F     +   +                I            +  
Sbjct: 149 SILAVLVVPTLLAFVVGFAMFKRRVGGVYFAIITQAVALILSVLIIGQQGYTGGVNGITD 208

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
           L     +       +  +Y+V   +   +     W++R  +      +RD +        
Sbjct: 209 LRTLLGWNIQGNSAKYVLYFVNAALLIGAMLACRWIQRGKVGTLLLAMRDKEDRVRFSGY 268

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
            +   K+ AF V++    + GA F      +SP       +I ++    +GG  S+    
Sbjct: 269 DVAMFKVFAFCVAAMLAAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAVGGRMSVVGAV 328

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
             T ++                    F  SF      LM      V++   + L  L   
Sbjct: 329 VGTILVNLGKTW--------------FSESFPNLWLYLMAAMFIGVVMAFPNGLAGLYEA 374

Query: 346 SNFLE 350
                
Sbjct: 375 HLRAR 379


>gi|320353686|ref|YP_004195025.1| HAAT family amino acid/amide ABC transporter membrane protein 1
           [Desulfobulbus propionicus DSM 2032]
 gi|320122188|gb|ADW17734.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Desulfobulbus propionicus DSM 2032]
          Length = 300

 Score = 79.1 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 98/303 (32%), Gaps = 17/303 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S   +  IY + A G ++V G +GL++      Y IGA++ +I  + +     L +P+
Sbjct: 8   LFSGLTRGSIYALIALGYTMVYGIIGLINFAHGEIYMIGAFTALIASTVFS---ILGLPL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A++       +                 + +    + LI    ++       +  +   
Sbjct: 65  PAILVLTALAAVVWAGAYGYTVERLAYRPLRNAPRLSPLISAIGMSIFLQNYVLLAQTSD 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +  F        I       +L+    +   + + ++ T    A R    ++ 
Sbjct: 125 FLPFPALIPDFALLEPYAAIIGSTDLAILVVSAVVMLFLTVLIKCTRTGKAMRATAQDRT 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + SA   + G   A+   +I+     F   I   +  +LGG+
Sbjct: 185 MALLVGINVDRIISITFVLGSALAAIGGLLIASHIGQINF-SIGFLAGIKAFTAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+      + +L        G     +  +  F               L L+++ R   
Sbjct: 244 GSIPGAVLGSFVLGLTEAFATGYVSSDYEDVFAFS-------------LLVLILIFRPAG 290

Query: 339 LLR 341
           LL 
Sbjct: 291 LLG 293


>gi|256830268|ref|YP_003158996.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
 gi|256579444|gb|ACU90580.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
          Length = 302

 Score = 79.1 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 91/303 (30%), Gaps = 17/303 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
                 +  IY + A G ++V G + L++      Y +GA+  +I+ S  G+  +    +
Sbjct: 10  FLGGLTRGSIYALIAIGYTMVYGIIELINFAHGEVYMLGAFVGLIIASVLGIMGFPAPAI 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +                            LI    ++       +  +   
Sbjct: 70  LVIAAVVAIIYCAGYGYSMEKIAYKPLRGAGRLSP---LISAIGMSLFLQNYIILAQTSD 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                R +  F        ++    + +++   F  A +  +++ T +  A R    N+K
Sbjct: 127 FLPFPRLIPDFDFIEPIAHVFGSSDFVIVVTSAFSMAGLTAFIKYTKMGKAMRATAQNRK 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + S+   + G   A+    ++     F   I   +  +LGG+
Sbjct: 187 MAMLLGVDADKVISITFILGSSLAALGGVLIASHVGMVNF-AIGFLAGIKAFTAAVLGGI 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L        G     +  +  F               L + ++ R   
Sbjct: 246 GSIPGAMLGGLFLGLSESFATGYISSDYEDVFAFT-------------LLVVFLIFRPSG 292

Query: 339 LLR 341
           ++ 
Sbjct: 293 IMG 295


>gi|325846991|ref|ZP_08169817.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480963|gb|EGC84008.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 295

 Score = 79.1 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 101/303 (33%), Gaps = 21/303 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      IY + A G ++V G   L++        +GAY+   +         L + +
Sbjct: 7   FFNGLQLGSIYALIALGYTMVYGVAKLINFAHGDIIMVGAYTIFFVVQTSLFKSGLPLYL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S + +     ++G+   +     L  ++ I   I    +  +                  
Sbjct: 67  SIIPAIIACTLLGVVIERVAYKPLRNSSSISILITAIGVSLFLE-------NLFVKFFTA 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V SL +        +       + ++    L+  + +++ +T        + ++ K
Sbjct: 120 NAKPVPSLFKQASLNIFGISLSFQTIFTIVLTIILTIILQIFISKTKYGKMMLAVSEDYK 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G+A   + +S  +I+P M      I   +  ++GG+
Sbjct: 180 ASSLVGINVDNTMTMTFAIGSALAGVASLLYVSSYPQITPFM-GSMLGIKAFTAAVVGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL  +  +        +                ++ + L +V++++   
Sbjct: 239 GSIPGAVIGGFILGMIEVMTRAYLSSSYADA-------------IVFMVLIVVLIVKPTG 285

Query: 339 LLR 341
           +  
Sbjct: 286 IFG 288


>gi|55380244|ref|YP_138093.1| high-affinity branched-chain amino acid transport protein
           [Haloarcula marismortui ATCC 43049]
 gi|55232969|gb|AAV48387.1| high-affinity branched-chain amino acid transport protein
           [Haloarcula marismortui ATCC 43049]
          Length = 435

 Score = 79.1 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 69/391 (17%), Positives = 132/391 (33%), Gaps = 60/391 (15%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +  +     + L      +   +  +     IY M A  L++  G  GL +L      
Sbjct: 27  LAIGGLYALFSVVLGFQLNGTVNTLRRVAFLSAIYAMLALALNLQWGYAGLFNLGAAGFM 86

Query: 75  AIGAYSYVILGSR-------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           AIG Y+  IL +        +GL + + I  + +++G  G +  LP+++ R DYLAI T+
Sbjct: 87  AIGVYTMGILTAPVTASPPGFGLPLPVAIVGAILVTGIIGGLAALPAIRLRADYLAIVTV 146

Query: 128 IMSEIFQNILIKWKPIT----------NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF- 176
             SEI +  L   +              G  G+ +      +              +   
Sbjct: 147 AFSEIVRLTLRAPEFANTRIAGVAFGTGGATGLSLPSNPIRILFYTDPATTAPAPNALGA 206

Query: 177 --------------VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                         ++       VL     L   +++ + ++      ++IR++Q+   +
Sbjct: 207 AIFSAVEPLGIEETLVIGWAYVIVLCLCLGLLYCLMIRIGKSPFGRVLKSIREDQQVTQA 266

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L       K+  FA+  A +G+   F+  S    SP MFK  +   +   + +GG  S +
Sbjct: 267 LGKDTRLFKIKTFALGCALMGLIAIFWRLSGGYASPRMFKPIQTFYIFIALFIGGTGSPT 326

Query: 283 KIAKATAI----------------------------LIGVVELCCGMNFYYFNSLLKFDC 314
                 A+                            L+  +     ++     +    D 
Sbjct: 327 GSIVGGALFASLLFEGPSFIRRVVAEYLQLSNAPDTLVSALAELGTLDVTPLLAYSVQDV 386

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           S +     L+ I L  ++      LL  R  
Sbjct: 387 SISALRLMLLGIVLVYLMQRHPDGLLGHRKA 417


>gi|325674006|ref|ZP_08153696.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter [Rhodococcus equi ATCC 33707]
 gi|325555271|gb|EGD24943.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter [Rhodococcus equi ATCC 33707]
          Length = 346

 Score = 79.1 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 62/291 (21%), Positives = 111/291 (38%), Gaps = 15/291 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + + A +  +++   L       Y   +      Y + A G+ I     G LS+      
Sbjct: 27  IAIEAGITLVVVAAVLVWMGPSLYRQDLVFLAATYALIALGMYIPFVMAGSLSMAYSAYA 86

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AIGAY+  ++  + GLS+W    + A+++    +I+ L + K  G YLA  TL+    F+
Sbjct: 87  AIGAYAVALVSVKTGLSMWWGWMIGALVAAVVAVILALATQKLSGFYLAAVTLLFGIAFE 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           + LI     T G AGI   + +                   +      +  + +      
Sbjct: 147 HWLIDGPDFTGGSAGISGVEAVT---------------LFGWQPPRYTLVVMAILFVCAI 191

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A ++  +R++      R  RDN+ A  S         + A A+ +A     G+ F  S  
Sbjct: 192 AVVVDRMRKSVWGLTLRAARDNKNAARSSGVNPAHLTVIALAIGAAIASTGGSLFTVSVQ 251

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
            ++P+ F  S   + I + I+GG  S         I++ V     G     
Sbjct: 252 AVTPETFTLSIVFLAIFMPIIGGRNSAWGAPLGALIVVIVTLNMPGYQGSG 302


>gi|225414533|ref|ZP_03761722.1| hypothetical protein CLOSTASPAR_05756 [Clostridium asparagiforme
           DSM 15981]
 gi|225041956|gb|EEG52202.1| hypothetical protein CLOSTASPAR_05756 [Clostridium asparagiforme
           DSM 15981]
          Length = 323

 Score = 79.1 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 43/324 (13%), Positives = 110/324 (33%), Gaps = 34/324 (10%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +   + +   +      +   +   +I+I  ++A   +++ G  G+ S+   + +  G
Sbjct: 9   LWIGTAVFIVFAVLGALLSEVGITFLSRIVIMALYALSFNLMFGYAGMSSVGHALYFGFG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+ ++  ++  + +     +S +        +G   LK      +  T+ +    Q +L
Sbjct: 69  GYALMVYLTKLQVPLLPACILSVLTVIPVAWFLGTACLKNNMLTFSFLTMGLCTTVQLVL 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            K   +  G  G        ++    +                  +++ +L    + A +
Sbjct: 129 YKTAQL-GGTVGFTYYFLPSWMSGYRQ------------------LFFFILICAGICAVL 169

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           I  L ++      + IR+N +    L   +   ++S F +S+ F  +AG  +A       
Sbjct: 170 IYLLVQSPYVQMLKGIRENDERMTFLGVNVRKMRVSIFVISAVFANIAGILYAFRNSGAY 229

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
                 + ++  I + ++GG +        + I+  +         YY            
Sbjct: 230 TTSLDANVSMQAIMMCVVGGRSVFLGPVLGSVIITTIQNYLSVKTMYYEG---------- 279

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                ++ + + L        LL 
Sbjct: 280 -----IIGVIIVLTAYYLREGLLG 298


>gi|284042127|ref|YP_003392467.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283946348|gb|ADB49092.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 338

 Score = 79.1 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 51/337 (15%), Positives = 106/337 (31%), Gaps = 25/337 (7%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
           SLR  +   +   + V   L L    G     +   +      +  + A GL++V G L 
Sbjct: 22  SLRPAQPVAVAVGVVVAIGLALIATKGLHDVAQTALNGLSFGAVVALGAVGLTLVFGILK 81

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           L++         GAY         GL + + +  +  ++   G+++         +  A 
Sbjct: 82  LVNFAHGDFLTFGAYIAFAANVSLGLPLVVSVLAAMALTAVLGIVLERVMWGPTRERGAG 141

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
              ++        +            Y              + R      + +       
Sbjct: 142 MLQLLLMSIGAAFVI----------RYGIQFFAGTDVKSLDVDRTGVVELAGLRIGSTAL 191

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
              +    +  +I L LR T +    R + DN++   +         ++ +  + A  G+
Sbjct: 192 IAGVTGIVVVVAIGLLLRFTLLGKRMRAVADNRELAETTGIDTRRVIVTTWLFAGATAGL 251

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG  FA + +        +   + + + VILG +        A  +L  V E    +   
Sbjct: 252 AGVLFALTTNV--KPELGYELLLPIFAAVILGSVGHAFGALVAGLLLGVVTEWSTLLVPA 309

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            +   + F             +AL L +++R   L  
Sbjct: 310 NWKLSVGF-------------LALILALIVRPQGLFS 333


>gi|83749023|ref|ZP_00946030.1| LivM [Ralstonia solanacearum UW551]
 gi|207743087|ref|YP_002259479.1| amino acid transport system permease lipoprotein [Ralstonia
           solanacearum IPO1609]
 gi|83724286|gb|EAP71457.1| LivM [Ralstonia solanacearum UW551]
 gi|206594484|emb|CAQ61411.1| amino acid transport system permease lipoprotein [Ralstonia
           solanacearum IPO1609]
          Length = 440

 Score = 79.1 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 44/333 (13%), Positives = 110/333 (33%), Gaps = 17/333 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +   L      L+ + L     + +  ++  Q+ I ++FA   ++++G  G+LS  
Sbjct: 23  RPFNLARWLIWGSTALVMIVLPLIWPRGFAITLLSQMGIMIIFALSYNMLLGQSGMLSFG 82

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
             +   +GA+  V L +R G +  L I     ++          +L              
Sbjct: 83  HAVYAGLGAFMAVHLLNRIGAAQALGIGGPLAVALLPLAGGLGGALFGVLFGYVTTRRAG 142

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +      L   + +    + +   D     G    +                 +YY++  
Sbjct: 143 TTFSMITLGIGEMVF--ASALMFPDFFGGEGGVSTNRSIGEPLLGISFGPARQVYYLIAA 200

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
            C +S +++    +T +      +RDN +    +  +    +     +S+ F G+AGA  
Sbjct: 201 WCLISMALMYAWTQTPLGRIANAVRDNPERVEFIGYSTQRVRCLVVILSAFFAGIAGALS 260

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + + ++ +      +  V+    +GGM +         + +       G+   +    
Sbjct: 261 CINFEIVTAENVSAVRSGAVLLAAFIGGMGTFFGPIIGAVLTVFFTVALSGITKAW---- 316

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         + +   L+++     +  L
Sbjct: 317 -----------LLYLGLFFVLMVMYAPGGIASL 338


>gi|116748306|ref|YP_844993.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
 gi|116697370|gb|ABK16558.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
          Length = 287

 Score = 79.1 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 99/304 (32%), Gaps = 22/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++        + AY+ +   + + L  ++  P 
Sbjct: 6   LINGVSLGSLYALVAIGYTMVYGILRLINFAHGDLLMVAAYAAIYGVAIFALPWYVGFPT 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I+GA G+++   + +   +   I+ LI +      L     +  G           F
Sbjct: 66  AILITGAMGILLDRAAYRPLRNAPRISLLISAIGASFFLENVALVVIGGVPKAFPRPDMF 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                          +  +  ++   Y  +    L   ++  + RT +  A R    + +
Sbjct: 126 SAV----------IEAFGLRIQVLTIYTPIVTALLVLGLLYVVYRTRVGKAMRAASKDFE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + S      G  +A    +++P M      +      +LGG+
Sbjct: 176 TTRLMGINLDRVISITFLLGSTLAAAGGIMWAMKYPQVNPLM-GVFPGLKAFIAAVLGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L     L                   +        + L LV+L R   
Sbjct: 235 GSIVGAVIGGFLLGLGEVLIVAALPGL-----------SQYRDAFAFVILILVLLFRPTG 283

Query: 339 LLRL 342
           ++  
Sbjct: 284 IMGE 287


>gi|225628462|ref|ZP_03786496.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella ceti str. Cudo]
 gi|225616308|gb|EEH13356.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella ceti str. Cudo]
          Length = 583

 Score = 79.1 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 50/288 (17%), Positives = 109/288 (37%), Gaps = 21/288 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91
               KY   +   + I  +    L +V G  G++SL  +    +GA+ +  +        
Sbjct: 37  LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 96

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + + + +  + +   G+ +GLP+L+ RG  LAI TL  +  F  +L        G+    
Sbjct: 97  LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATITFP--GQTSFT 154

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              R     +                      +  +L    + A ++ ++  + +  +W 
Sbjct: 155 QVARPDLFASDRS------------------YFLFVLLAYGIIAVVLEFISHSRLGASWL 196

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R +++A  +   +I  AKLSAFA+S+   G++G   A     +  + F   +++ + +
Sbjct: 197 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 256

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  + G            +++   EL   +N       + F       
Sbjct: 257 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 304


>gi|187477482|ref|YP_785506.1| ABC transporter permease [Bordetella avium 197N]
 gi|115422068|emb|CAJ48591.1| ABC transporter, permease protein [Bordetella avium 197N]
          Length = 327

 Score = 79.1 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 56/301 (18%), Positives = 117/301 (38%), Gaps = 16/301 (5%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKS-QKYIDSMGIQILIYVMFAWGLSIVVGSL 63
            L L + D +   L     ++  L         ++   + + + IY   A  +++++   
Sbjct: 6   HLALYRKDGVWQWLLHGLAIVALLCWPIWTGQPRFYLHLAVMVSIYAALAMSMNLLLRI- 64

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G LSL     + +GAY+  IL   +G S      ++ +++     + G   ++ +G + A
Sbjct: 65  GQLSLAHGALFGLGAYASAILSRDHGFSFPAAFIMAGVLTALVAALAGPVFMRIKGVHFA 124

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           + T  + E      I++  +  G  G      +                           
Sbjct: 125 LLTFALGEAIVLCFIEFHGLFGGNNGFGDIPPMSAGLPIPPGR--------------YGA 170

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           Y V +    +    +  L R        +++ N+    S    ++  ++S F +S+A  G
Sbjct: 171 YLVAVSFALVVYFGLRLLYRREWGMVAASLQQNEALVTSGGLNVLSFRVSVFVLSAAIAG 230

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
            AG+ +A  +  ISPD F F   +  + + +LGG+ +L+       +L+ + EL  G+  
Sbjct: 231 CAGSIYAHYQGYISPDAFGFWTAVNAVIMNVLGGVGALAGAVIGAVLLVPLPELLRGLQQ 290

Query: 304 Y 304
           Y
Sbjct: 291 Y 291


>gi|84502918|ref|ZP_01001031.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
 gi|84388901|gb|EAQ01771.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
          Length = 410

 Score = 79.1 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 53/375 (14%), Positives = 108/375 (28%), Gaps = 37/375 (9%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFL--FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           F LR       L LLA+    +  +    G             + L   + A  + +V G
Sbjct: 6   FILRNPSILIFLALLAIFTAAVTLMSEAFGTAMISTSFVKTLGKTLCLCLVALAMDLVWG 65

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-----------------AMISG 104
             G+LSL     + +G Y   +        I +   ++                  +   
Sbjct: 66  YCGILSLGHFAFFGLGGYMIGMWLMYARTEIIVTESLANAAIPPTDQEIVDAIGTQIFGV 125

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY------------- 151
                            L +  +++      ++  W    +   G+Y             
Sbjct: 126 VGSSDFPPIWAFAHSLPLQLLMVVLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALS 185

Query: 152 ----VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                 +        +  L       +S  +  ++  +       L   +  W+      
Sbjct: 186 LYLFQNESGLRGNNGLSGLQNLPGVAASQAVVSVWFLWASALALGLGYLLCAWVVSGKFG 245

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
           +  R IRD++     L  ++   KL  F +++   G+AGA +      I+P       +I
Sbjct: 246 SVVRGIRDDEARVRFLGYSVEGYKLFIFTLTAIIAGIAGALYYPQAGIINPGEVAPIASI 305

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            +   V +GG   L       A++  +     G           +   +      L+ ++
Sbjct: 306 YLAVWVAIGGRGRLYGAVIGAALVSLISTWFTGGLVPSVPLGF-YTIDWVDWWLVLLGLS 364

Query: 328 LFLVILMRSHSLLRL 342
             LV L     +  L
Sbjct: 365 FVLVTLFAPKGIGGL 379


>gi|332529316|ref|ZP_08405278.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
 gi|332041233|gb|EGI77597.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
          Length = 365

 Score = 79.1 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 107/293 (36%), Gaps = 7/293 (2%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY-- 88
                     ++  ++LI++       +++G  G++S    + + IGAY   I  +R   
Sbjct: 31  PFLVPGVKALNVAAKVLIFIALVASFDLLLGYTGIVSFAHTMFFGIGAYGVAIAFTRLGA 90

Query: 89  -GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
              ++   +  +  +S    +++GL SL+ +  + A+ TL ++  F  +  +   +T G+
Sbjct: 91  NWTALATGVASALAVSLLLSLLIGLFSLRVKAIFYAMITLAVASAFLTLASQLSDLTGGE 150

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
            G+                +         V   I  YY++     L    +L +  +   
Sbjct: 151 DGLTFRVPQL---LMPGFRLFEQDVLGVAVNGRIVTYYLIFLTVVLMFLALLRIVNSPFG 207

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-ISPDMFKFSEN 266
              + IR+N     +L    +  +  +  +S+ F  +AG   A             F   
Sbjct: 208 RVLQAIRENDFRAEALGYRTVVYRTLSNVISAGFATLAGCLLALWLRYNGPDTSLSFEIM 267

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           + ++ IV++GGM +L      + + +        +      ++  +     + 
Sbjct: 268 LDILLIVVIGGMGTLYGAILGSTLFLLAQSYLQDVLKLLGAAMEGWPLLPAIF 320


>gi|312795636|ref|YP_004028558.1| branched-chain amino acid transport ATP-binding protein livG
           [Burkholderia rhizoxinica HKI 454]
 gi|312167411|emb|CBW74414.1| Branched-chain amino acid transport ATP-binding protein livG
           [Burkholderia rhizoxinica HKI 454]
          Length = 754

 Score = 79.1 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 101/292 (34%), Gaps = 27/292 (9%)

Query: 50  VMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMI 109
           ++FA    +++G  GLLS    + Y IGA +   + + + LS   L  V    +    + 
Sbjct: 59  IVFALSYDLLLGQTGLLSFGHAMYYGIGALAAARVANAWALSAPWLPVVGGAGAALVAVP 118

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
            G  S +  G   A+ TL + E+             G  G+ +                 
Sbjct: 119 AGWLSARRGGVTFAMVTLGLGELVATAASTVPEWFGGVGGVMI------------DRGAV 166

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
             +           Y +++ +   S  +I WL RT + +    +RDN +    +      
Sbjct: 167 PGWLGIDFGATRAAYGLVVVVALASCMLIAWLLRTPLVHVANAVRDNPRRAAFVGVDPSR 226

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            + +   +++ F G+AGA    + +  + D    +     +  V++GG  + +       
Sbjct: 227 VRWAMTVIAAFFAGVAGALSVVTFEIATADNASVATCATALIAVVIGGTGTFAGPILGAV 286

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           + + +      +   +                  + +   LV+++    L+ 
Sbjct: 287 VYVSIANGLASITRAWP---------------MYVGLFFLLVVVLAPGGLIG 323


>gi|187928538|ref|YP_001899025.1| inner-membrane translocator [Ralstonia pickettii 12J]
 gi|187725428|gb|ACD26593.1| inner-membrane translocator [Ralstonia pickettii 12J]
          Length = 444

 Score = 79.1 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 49/338 (14%), Positives = 112/338 (33%), Gaps = 8/338 (2%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M    + L ++      +      L+ + L     Q +  ++  Q+ I ++FA   ++++
Sbjct: 24  MKFKPVNLARW------MLWGTTALVMIVLPLIWPQGFAITLLSQMGIMIIFALSYNMLL 77

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G+LS    +   +GA+  V L +   +     + +   ++ A   I G       G 
Sbjct: 78  GQSGMLSFGHAVYAGLGAFMAVHLLN--KIGAVQALGIGGPLAVALLPIAGGLGGALFGV 135

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
                T   S     ++          + +   D     G    +               
Sbjct: 136 IFGYVTTKKSGTTFAMITLGIGEMVFASALMFPDFFGGEGGVSTNRSIGDALAGITFGPA 195

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             +YY++   C +S +++    +T +      +RDN +    +       +     +S+ 
Sbjct: 196 RQVYYLIAAWCLISMALMYAWTQTPLGRIANAVRDNPERVEFIGYNTQRVRFLVVILSAF 255

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           F G+AGA    + + ++ +      +  V+    +GGM S         + +       G
Sbjct: 256 FAGIAGALSCINFEIVTAENVSAVRSGSVLLAAFIGGMGSFFGPIIGAVLTVFFTVALSG 315

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +   +   L  F     M     +   L + + +    
Sbjct: 316 ITKAWLLYLGLFFVLMVMYAPGGIASLLVIHLPILRRG 353


>gi|91784480|ref|YP_559686.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91688434|gb|ABE31634.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 428

 Score = 79.1 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 57/331 (17%), Positives = 115/331 (34%), Gaps = 28/331 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGAT-KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
             +  +LA    L+LFL +      Q ++ +   Q    ++FA   ++++G  GLLS   
Sbjct: 16  RALWRVLAPWLALILFLGVPPFVWPQSWLLAYLAQTAAMIVFALSYNLLLGETGLLSFGH 75

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +GA     L +R G+ + LL  V  +    CG++ G  S +  G   A+ TL + 
Sbjct: 76  AAYSGLGALVAAQLFNRIGVPLVLLPLVGGIGGALCGVLFGFISTRRAGTAFAMITLGLG 135

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           E+             G+AG+ +                  ++           Y ++   
Sbjct: 136 ELVAAAAWTLPDWFGGEAGVAI------------DRASGAQWAGWSFGPAREAYALIAVW 183

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
           C L+ + +  L RT        +RDN     ++       +     VS+ F G++G    
Sbjct: 184 CLLACAALFALSRTPFMRLANAVRDNPVRAAAIGCYPRRIRYGVVVVSAFFAGISGTLAL 243

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            + + +S +      +  V+   ++GG  +         +L         +   +     
Sbjct: 244 INVELVSTESVGMMRSGAVLIATVIGGTAAFFGPVAGAVVLTFFSVAVASVTRAW----- 298

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                        + +   +V++M    L  
Sbjct: 299 ----------LFYLGLFFIVVVVMSPDGLAG 319


>gi|163854602|ref|YP_001628900.1| branched chain amino acid ABC transporter permease [Bordetella
           petrii DSM 12804]
 gi|163258330|emb|CAP40629.1| Branched-chain amino acid transport system, permease component
           [Bordetella petrii]
          Length = 373

 Score = 79.1 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 52/344 (15%), Positives = 101/344 (29%), Gaps = 32/344 (9%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           +F    A     Y  ++  + + Y + A  L +V G  G+LSL   + +A+G Y++ +  
Sbjct: 40  VFPPGHALHVSAYAVALLGKFMCYALAALALDLVWGYAGILSLGHGLFFALGGYAHGMYL 99

Query: 86  S---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                                 W   P     +      M L  L   G           
Sbjct: 100 MRAIGRDGVYQSDVPDFMVFLNWKAYPWYWAFTDHFWYAMLLVVLVPGGLAFLFGYFAFR 159

Query: 131 EIF---QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                    +I            +  D  +          R   F  +       +Y+V 
Sbjct: 160 SRIKGVYFSIITQALTFAAMLLFFRNDTGFGGNNGFTDFKRILGFDITAPATRAGLYWVT 219

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L + F +  +   + ++ +      +RD +     +    +  KL  + +S+   G+AGA
Sbjct: 220 LAVLFGALVLARAVTQSKLGRVLTAVRDAESRLRFIGYEPLGFKLFVWTLSAVMCGVAGA 279

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +      I+P       +I ++  V  GG  +L         + G+             
Sbjct: 280 LYVPQVGIINPGEMSTENSIEMVIWVATGGRGTLIGPIIGAGAVNGLKTW---------- 329

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               F   F       + +   LV L+    ++ L         
Sbjct: 330 ----FTSVFPEFWLYALGLIFVLVTLLLPQGIVGLVRRWMARRE 369


>gi|108799256|ref|YP_639453.1| inner-membrane translocator [Mycobacterium sp. MCS]
 gi|119868372|ref|YP_938324.1| inner-membrane translocator [Mycobacterium sp. KMS]
 gi|108769675|gb|ABG08397.1| urea ABC transporter membrane protein [Mycobacterium sp. MCS]
 gi|119694461|gb|ABL91534.1| urea ABC transporter membrane protein [Mycobacterium sp. KMS]
          Length = 367

 Score = 79.1 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 48/357 (13%), Positives = 107/357 (29%), Gaps = 35/357 (9%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M  F  R   +        +++ +   +         +   +  + L + + A G+ +  
Sbjct: 1   MRTFVGRWQTWAGFGVAALLLFAVAPAVL------SDFRLGLLGKFLCFAIVAVGIGLAW 54

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI---------------WLLIPVSAMISGA 105
           G  G+L L   + + +G Y   +        +                L    +   S A
Sbjct: 55  GRGGMLVLGQGVFFGLGGYMMGMHLKISDAQLRGDDVPDFMQIAGVRELPGYWAPFASPA 114

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
             ++  +         L               I  + +    A + V          + +
Sbjct: 115 FTLLAIVVIPTGIAAVLGFGVFKRRVKGAYFAILSQALAAALAILLVGQTGLGGSNGLTN 174

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
              FF F  +  + +  +Y++   +  +  +++  L ++        +RD ++    L  
Sbjct: 175 FRTFFGFALNDPVNKQMLYFIAAAVLLVVVAVVRQLMQSRYGELLVAVRDGEERVRFLGY 234

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                K+ A+ V++    +AGA FA     ++P       +I  +  V +GG T+L    
Sbjct: 235 DPANIKVVAYTVAALCASIAGALFAPIVGFMAPSQVGILPSIAFLIGVAIGGRTTLLGPV 294

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                +     L              F   F         +   +V+      L  L
Sbjct: 295 LGAIGVAWAQTL--------------FSERFPSEWIYAQGLLFIVVVGFFPAGLAGL 337


>gi|319780305|ref|YP_004139781.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166193|gb|ADV09731.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 300

 Score = 79.1 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 50/302 (16%), Positives = 98/302 (32%), Gaps = 20/302 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A GLSIV G L L +        +GA+   +L     +   + +  
Sbjct: 11  IVNAVSLGSLYALVAVGLSIVFGVLKLTNFAHGDVMMVGAFGVALLVGIG-VPFPVAVIC 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +   G ++   + +   D   +A L+ S     I+     +    +          
Sbjct: 70  GIAAAAVAGFLIERIAYRPIRDAPDVARLLTSLAVTYIIENVGILVFTSSPRNFPLPDIL 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +   S           + +       +         +  ++ RT      R   ++  
Sbjct: 130 NTSWEMSN--------GAITFTSINLLTIALTFVSLLLLGWFITRTTTGLGMRAAAEDMS 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    + AF V+SA+ G+AG  +AA    + P M  F+  +      I+GG 
Sbjct: 182 AAHLVGLNVNRLIIVAFIVASAYAGLAGILWAAQAGVVQPQM-GFTPLLKAFVAAIIGGF 240

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++       IL  +                    S +     ++   L   +L+R   
Sbjct: 241 GSIAGALVGGYILGALEIFIVAF----------LPSSVSSYRDAIVFAVLIAFLLVRPGG 290

Query: 339 LL 340
           LL
Sbjct: 291 LL 292


>gi|212697511|ref|ZP_03305639.1| hypothetical protein ANHYDRO_02081 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675510|gb|EEB35117.1| hypothetical protein ANHYDRO_02081 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 295

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 101/303 (33%), Gaps = 21/303 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      IY + A G ++V G   L++        +GAY+   +         L + +
Sbjct: 7   FFNGLQLGSIYALIALGYTMVYGVAKLINFAHGDIIMVGAYTIFFVVQTSLFKSGLPLYL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S + +     ++G+   +     L  ++ I   I    +  +                  
Sbjct: 67  SIIPAIIACTLLGVVIERVAYKPLRNSSSISILITAIGVSLFLE-------NLFVKFFTA 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V S+ +        +       + ++    L+  + +++ +T        + ++ K
Sbjct: 120 NAKPVPSIFKQASLNIFGIRLSFQTIFTIVLTIILTIILQIFISKTKYGKMMLAVSEDYK 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G+A   + +S  +I+P M      I   +  ++GG+
Sbjct: 180 ASSLVGINVDNTMTMTFAIGSALAGVASLLYVSSYPQITPFM-GSMLGIKAFTAAVVGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL  +  +        +                ++ + L +V++++   
Sbjct: 239 GSIPGAVIGGFILGMIEVMTRAYLSSSYADA-------------IVFMVLIVVLIVKPTG 285

Query: 339 LLR 341
           +  
Sbjct: 286 IFG 288


>gi|229553343|ref|ZP_04442068.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus rhamnosus
           LMS2-1]
 gi|229313224|gb|EEN79197.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus rhamnosus
           LMS2-1]
          Length = 289

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 89/288 (30%), Gaps = 12/288 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A G ++V G + L++      Y +GA+      +         +  
Sbjct: 5   IINGLSLGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFWGYYAINYLHFGFVTALLS 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++   G+++   + +   +   IA LI +      L        G            
Sbjct: 65  AMLMASLSGVLIEYLAYRPLRNSPRIAALITAIGVSFFLENGMSFLFGAN---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I    +    V        +L     L   +   +++T +  A R +  + +
Sbjct: 115 -ARNFPQVIATKTYHLGGVDISNVQLLILFTSLVLMILLQFIIKKTTMGKAMRAVAVDPQ 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +           FA+ SA  G AG       + I P M      I      ++GG+
Sbjct: 174 AAQLVGINPDHVISFTFALGSALAGAAGVMIGLYYNSIDPLM-GMVPGIKAFVAAVVGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            S+   A    ++  +      +    +     +     +       +
Sbjct: 233 GSIPGAAIGGFLIGLLETGVQAIGLSAYKDAAVYLVLILVLVVLPAGL 280


>gi|227819496|ref|YP_002823467.1| branched-chain amino acid ABC transporter permease [Sinorhizobium
           fredii NGR234]
 gi|227338495|gb|ACP22714.1| branched-chain amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 335

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/325 (15%), Positives = 114/325 (35%), Gaps = 27/325 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
                ++L L +          ++  ++    +    L +V G  G+ +L     +  GA
Sbjct: 24  LAGLAVILGLAVVGYLLFPNNLALLTRMTAIALLVLSLDLVTGYCGVATLGHAALFGTGA 83

Query: 79  YSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           Y+  I    +      L++    +     G++ G+  L+  G    + ++ +  +F    
Sbjct: 84  YASGIAAVHFGITDPLLMLACGILGGAVAGLVCGVVILRAHGLPQLVLSIALIHLFHEFA 143

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            K    T G  G+        LG               F ++    Y + + +  L  ++
Sbjct: 144 NKASSWTGGSDGLAGIAPDPLLGY------------FEFDLWGRTAYVLGIILLALVFAL 191

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  + R+      R ++++     ++  +   A +  + +S A  G  GA  A S   + 
Sbjct: 192 LRLVVRSPFGMLCRGVKEDPIRIRAMGASPKLALMKMYVISGAVAGAGGALNAISTQVVG 251

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            D   F+ +   + +++LGG  SL      T + +   ++    N +++           
Sbjct: 252 LDSLSFTLSAESLVMLVLGGTGSLFGALTGTIVFMFFEDVVSAANPFHW----------- 300

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
               T++   L  V+L     L   
Sbjct: 301 ---LTMVGALLIAVVLFAPKGLYGT 322


>gi|134300081|ref|YP_001113577.1| inner-membrane translocator [Desulfotomaculum reducens MI-1]
 gi|134052781|gb|ABO50752.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Desulfotomaculum reducens MI-1]
          Length = 293

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 93/288 (32%), Gaps = 11/288 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GAY      +  G S    + +
Sbjct: 8   LINGISLGSIYALIALGYTMVYGIVQLINFAHGDIYMVGAYLGFFATAILGWSFIPALLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G+++   + K   +   IA LI +      L     +            L  
Sbjct: 68  AMIVCAILGVVIEKLAYKPLRNSPRIAALITAIGVSLFLEYGMMLLVKPDVRTFPQVLSE 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   +             ++       +L+    L   +   + +T +  A R +  +++
Sbjct: 128 VQYKL----------FGNLVITNRQIIILVITVVLMLLLQYIVHKTRMGKAMRAVSYDKQ 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S+    AG       + I+P M      +      +LGG+
Sbjct: 178 AAQLMGINVNNTISFTFAIGSSLAAAAGVLVGIYYNAINPLM-GIMPGLKAFVAAVLGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             +        +L  V  +  G     +     F     +       +
Sbjct: 237 GIIPGAMAGGFLLGIVEAMVSGYGKSLYRDPAAFIILIIILIVLPAGL 284


>gi|317487019|ref|ZP_07945827.1| branched-chain amino acid transport system/permease component
           [Bilophila wadsworthia 3_1_6]
 gi|316921701|gb|EFV42979.1| branched-chain amino acid transport system/permease component
           [Bilophila wadsworthia 3_1_6]
          Length = 297

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 93/307 (30%), Gaps = 22/307 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      +Y + A G ++V G L L++        +GAY      + + L   + + V
Sbjct: 10  FFNALTLGSLYGLIAIGYTMVYGILRLINFAHGDILMLGAYFVFYGTTTFFLPWGVAVVV 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + + A G+++   + +   D   I+ LI +      +     +        V    + 
Sbjct: 70  AILAASAVGILVDRIAYRPLRDAPRISALISAIAVSFFIESLSVVVFSGLPRPVYQPEWL 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +                 +        V +    L   ++  + RT    A R I  + +
Sbjct: 130 MTP----------INFGQLKLLPITLVVPVVSFVLVLGLLWIIHRTKPGLAMRAISKDIE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +      AF + SA    +G  +A    +I+P M             +LGG+
Sbjct: 180 TTRLLGVRVDRIIALAFGLGSALAAASGIMWALRYPQINPYM-GIFPGFKAFIAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L  +  +              F     +    +           R   
Sbjct: 239 GSIQGAMIGGLLLGFIEIMTVAFMPSLSGYRDAFAFVVLVLVLLV-----------RPTG 287

Query: 339 LLRLRTP 345
           L   R+ 
Sbjct: 288 LFGQRSE 294


>gi|257469882|ref|ZP_05633974.1| branched chain amino acid ABC transporter permease [Fusobacterium
           ulcerans ATCC 49185]
 gi|317064111|ref|ZP_07928596.1| branched-chain amino acid transport system permease livH
           [Fusobacterium ulcerans ATCC 49185]
 gi|313689787|gb|EFS26622.1| branched-chain amino acid transport system permease livH
           [Fusobacterium ulcerans ATCC 49185]
          Length = 294

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 90/306 (29%), Gaps = 28/306 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL---SIWLL 95
           I +      IY + + G ++V G   L++        +GAY  +     +      +WL 
Sbjct: 7   IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMVGAYVSLFSIPVFTRIGLPVWLT 66

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  + ++    G +    + +   +   I+ LI +     +L                  
Sbjct: 67  VFPAIIVCVILGTLTERIAYRPLRNSPRISNLITAIGVSLLLENTFMKLFTPNTRAFPKV 126

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                +         ++    LS  +  ++++T    A     +
Sbjct: 127 FTNPP-----------IVIGRMHLNFGTVVTIVLTIILSVGLQYFMKKTKYGKAMMATSE 175

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   +   +       FA+ S    +A   + A+  ++ P M      I      +L
Sbjct: 176 DYGAAKLVGINVDHTIQLTFAIGSGLAAVASVLYVAAYPQVQPLM-GAMLGIKAFIAAVL 234

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  L        IL  V  L                          +   L +V+L++
Sbjct: 235 GGIGILPGAVIGGFILGIVESLTRAYLSSQLADA-------------FVFAILIVVLLVK 281

Query: 336 SHSLLR 341
              +L 
Sbjct: 282 PTGILG 287


>gi|53719611|ref|YP_108597.1| putative branched amino acid related transport system, bifunctional
           protein (membrane and ATP-binding) [Burkholderia
           pseudomallei K96243]
 gi|52210025|emb|CAH35998.1| putative branched amino acid related transport system, bifunctional
           protein (membrane and ATP-binding) [Burkholderia
           pseudomallei K96243]
          Length = 776

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 16  ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 75

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 76  GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 135

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 136 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 183

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 184 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 243

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 244 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 292

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 293 ----LLYLGLLFVAVVLAAPGG 310


>gi|298290300|ref|YP_003692239.1| inner-membrane translocator [Starkeya novella DSM 506]
 gi|296926811|gb|ADH87620.1| inner-membrane translocator [Starkeya novella DSM 506]
          Length = 632

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 54/335 (16%), Positives = 116/335 (34%), Gaps = 33/335 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
            L  +     + A+    L            Y   + + +L+  +FA  L  ++G  G+ 
Sbjct: 318 PLRPFSAPARVFALAAIALFAAMPLIGTLVSYAPVLALDMLVAALFAASLHFIMGPGGMA 377

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S      + +GAY      +   L   L       ++    ++ G   ++  G Y A+ T
Sbjct: 378 SFGHAAYFGLGAYGTAYAVTALDLPTPLAFATGIGVAAFGAVLFGWFCVRLEGVYFAMLT 437

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L  ++I  ++  +W+ +T G  G++     +   +                     +Y  
Sbjct: 438 LAFAQIVWSVAFQWEEVTGGSNGLFDVWPEWPFDSRTG------------------LYLA 479

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
              +      ++  L       A R  RD++    +    +   +  AFA++ A  G AG
Sbjct: 480 AFVVTLAGLMLLRRLVFAPFGMALRAARDSRLRAEASGIPVARVRWLAFALAGAVCGAAG 539

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             FA ++  ISP+      +I  + +V++GG+ SL            + +       Y+ 
Sbjct: 540 GLFAFAKGSISPEAISVGRSIDGLVMVLIGGVQSLVGPVVGAGAFTLLQDSVMRETDYWR 599

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                           L+ + +  ++L+    +  
Sbjct: 600 A---------------LLGVLILAIVLLFPFGIAG 619



 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/308 (15%), Positives = 96/308 (31%), Gaps = 9/308 (2%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +         + A GLSI+ G   ++++     Y +G Y  V       L  W+  P+ 
Sbjct: 11  VNGLASASGLFLVAAGLSIIFGVTRIVNMAHGSFYMLGLYLAV--TLAPKLGTWIGGPLG 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                    ++           L        E++Q +      +    A +++      L
Sbjct: 69  FWAGILAAALVVAALGALIEMTLLRRLYGAPELYQLLATFALLLVINDAALFLWGPEDIL 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G     L               +  ++ L    +   + L L RT      R    +++ 
Sbjct: 129 GPRAPGLS--GSVMLLGRRLPQYDIFLALIGPAVLIGLHLLLARTRFGRLIRAATQDREM 186

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L         + FA+ +   G+ GA   A            S       +V++GGM 
Sbjct: 187 VAALGINEALLFTAVFALGAGIAGLGGALQMAREPA--SLTLDLSVLGDAFVVVVVGGMG 244

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  ++     LC  +       +  F  + +        + + LV+++R H L
Sbjct: 245 SIRGAYLAAVLVAEAKALCTALG---VVDIFGFTFNMSRLTLVAEFLVMALVLIVRPHGL 301

Query: 340 LRLRTPSN 347
                P  
Sbjct: 302 FGRPQPPA 309


>gi|291303046|ref|YP_003514324.1| ABC transporter-like protein [Stackebrandtia nassauensis DSM 44728]
 gi|290572266|gb|ADD45231.1| ABC transporter related protein [Stackebrandtia nassauensis DSM
           44728]
          Length = 563

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 63/305 (20%), Positives = 115/305 (37%), Gaps = 34/305 (11%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-----W 93
            +S+   I +  + A+   IV+   G LSL      ++GAY+  ++     L        
Sbjct: 5   YESLLTTIALTGILAYSFHIVL-MSGQLSLGQAGFASLGAYTSALVVPETPLFGSLSPAI 63

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + IPV A +  A  +++GLP L+ RG +LAIAT+  +E+ +  ++     T G  G+Y+ 
Sbjct: 64  VGIPVGAAVGAAAAVLLGLPVLRLRGVFLAIATIAFAEVVRIYMVNASW-TGGPEGMYLD 122

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             +                             +      L A  +  L  + +  A   +
Sbjct: 123 KWVTPE--------------------------LAWLALILVAYTVWRLGPSRMGRALAAV 156

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R+++ A  ++   +  A+++AF  S A  GM G+ FA     I P  F F+  +  +   
Sbjct: 157 REDEVAAGAMGINVSRARMAAFTASGALAGMYGSLFAFFARGIEPGDFNFTMMLDGLVTA 216

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMN-FYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           I+GG          +  L  + EL         +           +    L      L+ 
Sbjct: 217 IVGGFLVFFGPIMGSGFLNLLPELQRATGLEAGWMHPFVTGALLLLVILFLPGGLSSLLT 276

Query: 333 LMRSH 337
            +R  
Sbjct: 277 WIRPR 281


>gi|170740221|ref|YP_001768876.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168194495|gb|ACA16442.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 626

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 55/325 (16%), Positives = 118/325 (36%), Gaps = 34/325 (10%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
            A+    +  L         Y+  +  +IL++ + A+ L  +VG  GL+S      + +G
Sbjct: 317 AALTGLAVAALLAVPLVGDAYLVKVATEILVFALAAFSLQFLVGVGGLVSFGHAAYFGLG 376

Query: 78  AYSYVILGSRYGLSIW-LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           AY+  +L +    +   L +  + +       + G   ++  G YLA+ TL  ++I   I
Sbjct: 377 AYAAGLLVTGPLRAPMELALLAAPLAGALGAALFGFFIVRLSGIYLAMLTLAFAQIVYAI 436

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
             +W  +T G  G+                     +PS++       +Y++        +
Sbjct: 437 GFQWVEVTGGDNGLVGV------------------WPSAWAAGRTTYFYLVAAATLACIA 478

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  +         R  RD+     ++       +  AF ++    G+AG  +A  +  I
Sbjct: 479 ALRRIVFAPFGYGLRAARDSATRAEAIGLDTRTHRWLAFTLAGGAAGLAGGLYAFQKGSI 538

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
            P +     +I  + +V++GG+ +L            + +    +  Y+           
Sbjct: 539 DPTLAAIPTSIDFLVMVLVGGIRTLMGPLVGAGFFHALKDAVMPLAAYW----------- 587

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 L+ +A+   +L   H L  
Sbjct: 588 ----RLLLGLAIIATVLALPHGLAG 608



 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 86/303 (28%), Gaps = 20/303 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            S         + A GL++V G   +++        +GAY   +  S     + L    +
Sbjct: 11  LSGLASAASLFVIASGLTLVFGVTRIVNFAHGSFTMLGAY---LAVSLVPRLLDLSYTPA 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           +   G     + +  +    + L +  L        +L  +  +   +  +        L
Sbjct: 68  SFFLGVLLAALLVGLIGVAVEVLLLRRLYRVPELFQLLATFGVVLIVEDLVLAIWGPVDL 127

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                  +R          +  +   ++     L   + L + RT      R    ++  
Sbjct: 128 AGPRAPSLR-HGVEILGQRFPAYDLVLIGIGPALLGLLWLLMHRTRFGILIRAATQDRDM 186

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L             + +A  G+ GA                +       + ++GGM 
Sbjct: 187 VGALGVNQARLFTLTLFLGAALAGLGGALQIPRVPA--NGHMDLAVITDAFVVTVIGGMG 244

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  ++  +      +                     L+   + +V++++   L
Sbjct: 245 SVPGAFLAALLIGELQAFGILL--------------LPKATLVLVFALMAVVLVVKPWGL 290

Query: 340 LRL 342
           L  
Sbjct: 291 LGR 293


>gi|167629192|ref|YP_001679691.1| branched chain amino acid abc transporter, permease protein
           [Heliobacterium modesticaldum Ice1]
 gi|167591932|gb|ABZ83680.1| branched chain amino acid abc transporter, permease protein
           [Heliobacterium modesticaldum Ice1]
          Length = 293

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 114/305 (37%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +Q  IY + A G S+V G L LL+L     + +  +  + L + + L +WL +P+
Sbjct: 7   IINGVMQGSIYALVAIGYSLVFGLLNLLNLAHGELFMLSGFIGLFLMTYFDLPLWLSLPL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +GA G+ +     +       +A ++ +  F ++++       G            
Sbjct: 67  TMLSAGAIGVAVEALCFRPIKKEYHLAPIVSTIAFGSVMVNSMVNLVGSEPQV------- 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S +         ++         +    L   +   + +T +    R + +N+K
Sbjct: 120 ----FPSHVDIPDIALGGLLISGSQMVSFVIAATLMVFLSYIVEKTKLGRGIRAMAENEK 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +    +  F +S+A  G+AG        ++S      +  +  ++++++GG+
Sbjct: 176 AAQILGVDVRKTVMITFFISAALAGIAGILVGLRFGKLS-PFIGATIGLKALAVMVIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++     A  +L  +      +               +     ++   L  ++L +   
Sbjct: 235 GNIYGAMLAGILLGVLEAATVVI------------PGLSPYVDAVIWGFLVFILLFKPTG 282

Query: 339 LLRLR 343
           LL  R
Sbjct: 283 LLGTR 287


>gi|218782216|ref|YP_002433534.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218763600|gb|ACL06066.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 302

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 92/303 (30%), Gaps = 17/303 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    ++  IY + A G ++V G + L++      Y IGA++ +I      ++ +    +
Sbjct: 10  LMGGVVKGSIYALIALGYTMVYGIIELINFAHGEIYMIGAFTALIAAGVLTVAGFPAWSI 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + S A  +                          + LI    ++       +  +   
Sbjct: 70  LILASAAAVVWSASYGYTVEKIAYKPLRGA---PRLSPLISALGMSIFLQNYVLLAQTSN 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                          +   +       ++     +   + L+++ +    A R    ++ 
Sbjct: 127 FMPFKNLFPEEGFLENISEVLSATEVIIVFTSAVVMILLSLFIKYSTTGKAMRATAQDRN 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +     + F + S+   +     A++  +I+     F   +   +  +LGG+
Sbjct: 187 MAMLVGVNVDKVISATFIIGSSLAAVGAVLIASNMGQINFY-IGFIVGLKAFTAAVLGGI 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L        G     +  +  F               L L+++ R   
Sbjct: 246 GSIPGAMLGGLVLGCTESFGTGYVSSDYEDVFAFT-------------LLVLILIFRPAG 292

Query: 339 LLR 341
           LL 
Sbjct: 293 LLG 295


>gi|170694843|ref|ZP_02885993.1| inner-membrane translocator [Burkholderia graminis C4D1M]
 gi|170140203|gb|EDT08381.1| inner-membrane translocator [Burkholderia graminis C4D1M]
          Length = 355

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 89/296 (30%), Gaps = 2/296 (0%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L                    L++   A GL+ + G  G+LS      + +  Y+Y I  
Sbjct: 21  LVALCLPLVVDANASGNLAYCLLWAFSALGLAAMWGYGGILSFGQTAFFGLSGYTYGIFT 80

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
             YG + +              +   L         +    + +  +   ++++      
Sbjct: 81  LNYGDTWFESWLGLGAGIAVSIVAAALIGYMIFYGRIKGVFIGIVTLSVTLVLETFMSQT 140

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE--IFMYYVLLGMCFLSASIILWLRR 203
                 + +        +  + +         +    +  YY++L +     +I+  L  
Sbjct: 141 AGPQWAIGEARLNGYNGMGGMPQLTIPWPGGTLTLENVSFYYLVLLLLIAVYAIMRKLLD 200

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
                    IR+N +    L   I   +L  F +     G++GA +      I+P     
Sbjct: 201 GTFGLTLIAIRENPQRAEMLGVDIRRHQLMVFVLGCTLGGLSGALYTIWGSYITPSTMGL 260

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +   + +  V   G  S+      TA+L+ + +        Y   LL       + 
Sbjct: 261 TAAAMPVIWVATSGRKSIGGTIIGTALLVWLSQNLAVYGSQYALILLGAILLIVVL 316


>gi|152980329|ref|YP_001354238.1| branched chain amino acid ABC transporter permease
           [Janthinobacterium sp. Marseille]
 gi|151280406|gb|ABR88816.1| Branched-chain amino acid ABC-type transport system, permease
           components [Janthinobacterium sp. Marseille]
          Length = 309

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 98/307 (31%), Gaps = 8/307 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G L L++        IGA + + +          L  +
Sbjct: 8   IINGLVLGSMYALVALGYTMVYGVLNLINFAHGDVLMIGAMAGLTILKMLNTVAPDLPGI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +I    G I    ++    + +A   L  +     ++         +    +      
Sbjct: 68  VKLIIAILGAIPVCVAVNVLIERVAYRRLRNAPRLAPLITAIGVSILLQTLAMMIWGRS- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +          +       +L+        ++L + +T +  A R   +N +
Sbjct: 127 -PIPFPQEMPTEPLHIMGALISPTQVMLLILAAVAMGLLVLLIEKTRMGRAMRATSENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        +  FA+ +    +AG  +AA+       M  F   +   S  +LGG+
Sbjct: 186 VAGLMGVDSNRVIVMTFAIGAILAAIAGVMWAANYSSAQFAM-GFVPGLKAFSAAVLGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L  +  L  G         L      +        + L +V+ +R   
Sbjct: 245 GNIYGAMLGGILLGLIESLGAGYIGDLTGGFLG-----SHYQDIFAFVVLIIVLTLRPSG 299

Query: 339 LLRLRTP 345
           ++  R P
Sbjct: 300 IMGERVP 306


>gi|301061595|ref|ZP_07202353.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
 gi|300444288|gb|EFK08295.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
          Length = 326

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 63/333 (18%), Positives = 121/333 (36%), Gaps = 38/333 (11%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           VV  L  FL         Y       + +Y   A    IV G LG ++L     + +GAY
Sbjct: 12  VVLLLWAFLAALPFLGFSYGVVWVFLLAVYFTLALSYDIVGGYLGYMNLGHASFFGLGAY 71

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  IL ++   +++  +P + +++ A   ++  P  + RG Y A+AT  +  + + +   
Sbjct: 72  TTAILLNQG-FNLFSALPGAMLLAAAFAAVISYPLFRLRGAYFALATFGLVSLIEVLTNN 130

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
            + +T G  GI      +                       +  YY++L +   +  +  
Sbjct: 131 LRDLTGGSGGISTPPGDH----------------------TLPSYYLVLAVAGGTMVLSQ 168

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            + R+    A  +IR++++   +        K  A  +SS    + G  +      ISP+
Sbjct: 169 IIARSKFGLALFSIREDEEVAKAFGVPTTLYKGLALIISSVPASVVGGIYVWHMTYISPE 228

Query: 260 M-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F     +  I + +LGG   +         +  V E       Y+             
Sbjct: 229 SVFGLEIALSPIIMAMLGGTGIMIGPLVGAVFITLVQEFLWTKVPYF------------- 275

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            H  +    L L+       L+R+R    F++R
Sbjct: 276 -HLAMYGTVLVLLGRFMPGGLVRIRWIRPFIQR 307


>gi|228958244|ref|ZP_04119973.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|229127363|ref|ZP_04256359.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus BDRD-Cer4]
 gi|229150191|ref|ZP_04278413.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus m1550]
 gi|228633310|gb|EEK89917.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus m1550]
 gi|228656196|gb|EEL12038.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus BDRD-Cer4]
 gi|228801453|gb|EEM48341.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 298

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 58/304 (19%), Positives = 123/304 (40%), Gaps = 31/304 (10%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPV 98
           M  QI I+ +FA    +++G  G++S    + + IGAY   +L  R      +  + I  
Sbjct: 1   MFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFLIGIVA 60

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++S     I+GL SL+ +  + A+ TL +S++F  +  KW+ +T+G  G        F
Sbjct: 61  AIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPDVF 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                    YYV L    +   ++    +++I    + I  N++
Sbjct: 121 RDRF-------------------TFYYVTLICLLIIFVLLRLFTKSSIGKVLKAISQNEQ 161

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   ++  K+ A  V+     ++G  F  +   ++  +F     +  + + ++GG+
Sbjct: 162 RVEALGYKVLHYKIIASIVAGVVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGV 221

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L            +       +  Y+ S L  +     R T ++ +   +V+L+    
Sbjct: 222 GTLI---------GAIAGAGIIESLKYYLSELATEYPIFERWTIILGLLYIIVLLVFPKG 272

Query: 339 LLRL 342
           L+  
Sbjct: 273 LVGT 276


>gi|156933945|ref|YP_001437861.1| hypothetical protein ESA_01771 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532199|gb|ABU77025.1| hypothetical protein ESA_01771 [Cronobacter sakazakii ATCC BAA-894]
          Length = 521

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 84/291 (28%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY+   + +         +    +++     ++   +   
Sbjct: 248 ITYGLLGVINMAHGEMLMLGAYATWCVQNALAEFAPQWLTFYPLLALPVAFLVTACAGMA 307

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 I   +     + +L  W         + +A     +     + +         +
Sbjct: 308 LER--TIIRHLYGRPLETLLATWGISLMLIQLVRMAFGAQNVEVANPAWLSGGIQVLPNL 365

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       V+  +  +     L L +T +    R +  N+              + AF +
Sbjct: 366 ILPWNRLVVMGFVMLVLFFTWLVLNKTRLGMNVRAVTQNRAMAACCGVPTGRVDMLAFGL 425

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   +   +            I    +V+LGG+  L+    A   L    ++
Sbjct: 426 GSGIAGLGGVALSQLGNV--GPELGQGYIIDSFLVVVLGGVGQLAGSVAAAFGLGIFNKI 483

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   L  L+  +  
Sbjct: 484 LEPQVGAVLGK-------------IAILVMVILFIQKRPQGLFALKGRAVE 521


>gi|264678301|ref|YP_003278208.1| High-affinity branched-chain amino acidtransporter permease livH
           [Comamonas testosteroni CNB-2]
 gi|299532144|ref|ZP_07045538.1| High-affinity branched-chain amino acidtransport system permease
           protein livH [Comamonas testosteroni S44]
 gi|262208814|gb|ACY32912.1| High-affinity branched-chain amino acidtransport system permease
           protein livH [Comamonas testosteroni CNB-2]
 gi|298719806|gb|EFI60769.1| High-affinity branched-chain amino acidtransport system permease
           protein livH [Comamonas testosteroni S44]
          Length = 307

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 86/303 (28%), Gaps = 14/303 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G +G+++      Y IGAY  ++  S  G    L I  
Sbjct: 12  LFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGDIYMIGAYIGLVTLSAIGTQSGLPIWA 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +     + +                     +   I      I               
Sbjct: 72  IIGLMLVVAVFVTGVYGLVVEQVAYKPVRQSPRLVALISAIGMSIFLQNWVALGQGARDM 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              ++      F   +  V        ++     L  ++ ++++ + +  A R    +  
Sbjct: 132 AVPSLLPGAINFHMGNFEVFIPYTRVLIIAVTVVLMIALTMYIKHSRMGRASRACAQDMH 191

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +    + G   A +  +++     F   I   +  +LGG+
Sbjct: 192 MANLLGIDTNKVISFTFVLGAVLAAVGGVLIALAVGKLN-PFIGFLAGIKAFTAAVLGGI 250

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL              +  ++ F               L  +++ R   
Sbjct: 251 GSIPGAMLGGVILGVAETFAAAYISSEYKDIVAFG-------------LLVTILMFRPSG 297

Query: 339 LLR 341
           LL 
Sbjct: 298 LLG 300


>gi|171913403|ref|ZP_02928873.1| putative branched-chain amino acid transport system permease
           protein [Verrucomicrobium spinosum DSM 4136]
          Length = 308

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 95/301 (31%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++   GL+++ G +G++++      A+GAY+  +  +          P   ++
Sbjct: 21  ISLFSVLLLMGLGLAVIFGQMGVINMAHGEFMALGAYTVYLCSTLTAEYAPSFGPYYFVV 80

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++             +   +       +L  W      +           +  T
Sbjct: 81  AIFIAFVVCALVGAAVEW--LMIRRLYHRPLDTLLATWGLSLIMQQTFRSTFGAREVTPT 138

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P   +   I   +VL     +S +++L++ +++     R    N+K   +
Sbjct: 139 LPEWLMGSYSPKEGLDIPINGMFVLGLAIAVSLALLLFMYKSSFGLRLRATVQNRKMSGA 198

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +          AFA+     G+AGA  A +    +         +    +V+ GG  SL 
Sbjct: 199 VGINTNSVDRLAFALGCGIAGIAGA--AFTTIGSTGPDSGSRYIVDAFLVVVFGGAASLM 256

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     +           +                + + + +++R   L   
Sbjct: 257 GSLASAFGIAQAQSILEFFLEGTKGKVATL-------------LVIVIALMIRPQGLFPS 303

Query: 343 R 343
           +
Sbjct: 304 K 304


>gi|91976257|ref|YP_568916.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91682713|gb|ABE39015.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 305

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 104/312 (33%), Gaps = 28/312 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGL 90
           + +  +   IY + A G ++V G +G+++      + IG +  +I          +   L
Sbjct: 8   LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLILVSFGLTFVPL 67

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + +++ VS  I+   G  +   + +       +A ++ +     +L+ +  +  G    
Sbjct: 68  ILLVVLLVSMAITALYGWTVERIAYRPLRHSFRLAPMLSAIGMSFVLMNYSQVAQGARVK 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            V   +    T   S   F    S+  I  +    VLL      A     + +T +    
Sbjct: 128 PVPPIITGGYTLHESADGFNVQLSNVQILVVITTIVLL------AIFTWLVAKTRLGRDM 181

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    +Q     L   +       F + +A   +AG  +      +   M  F   I   
Sbjct: 182 RACEQDQTMASLLGVDVDRTISMTFVIGAALASVAGMMYLLYYGLVDFFM-GFVAGIKAF 240

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ SL        ++  +  +        +  +  F               L +
Sbjct: 241 TAAVLGGIGSLPGAMLGGLLIGLIETMWSAYFSVEYKDVAAFS-------------ILIV 287

Query: 331 VILMRSHSLLRL 342
           V++     LL  
Sbjct: 288 VLIFMPTGLLGR 299


>gi|167825451|ref|ZP_02456922.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 9]
          Length = 359

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 79/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ +     +        + +              
Sbjct: 85  ITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPVSFAAAAALGIV 144

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         + +      +     S +         +
Sbjct: 145 LER--TVLRHLYGRPLETLLATFGVSLILIQAMRMIFGAQNVQVVNPSWMSGGVTVMQNL 202

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I       +L     +       L +T +    R +  N++    +          AFA 
Sbjct: 203 ILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAF 262

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+          S  +     V+LGG+  ++        L  V + 
Sbjct: 263 GAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLVSKA 320

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L I  R   +  L+  S  
Sbjct: 321 IEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 358


>gi|149909705|ref|ZP_01898357.1| hypothetical protein PE36_22340 [Moritella sp. PE36]
 gi|149807219|gb|EDM67174.1| hypothetical protein PE36_22340 [Moritella sp. PE36]
          Length = 375

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/336 (13%), Positives = 96/336 (28%), Gaps = 33/336 (9%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           LL         + Y  ++  + L Y + A  + +V G LG+L+L     +A+G Y+  + 
Sbjct: 36  LLVPQGHFLHIETYTITLLGKYLTYALLAMSVDLVWGYLGILTLGHGAFFALGGYAMGMY 95

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
             R      +                 LP      D    A L++  +   + + +  ++
Sbjct: 96  LMRQIGDRGVYGHPELPDFMVFLDWQELPWFWQGFDMFWFACLMVVLVPATLALVFGFLS 155

Query: 145 NGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                                    +  +  +     +        F       ++ ++ 
Sbjct: 156 FRARVSGVYFSIMTQALTFALMLAFFRNEMGFGGNNGLTDFKDILGFSLQADTTKVSLFM 215

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
             +    L       +  + +      IRD +     +   +   KL  F +S+   G+A
Sbjct: 216 ASVVALILGYLTCRKVVSSRLGKVAVAIRDAEPRVRFIGYNVANFKLGIFILSAMLAGIA 275

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA +      I+P  F    +I ++  V LGG  +L        ++              
Sbjct: 276 GALYVPQVGIINPGEFSPLNSIEIVVWVALGGRATLFGAIIGALLINYAKSW-------- 327

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                 F           +     L  L     +  
Sbjct: 328 ------FTIELPEVWLFALGSLFVLATLFLPKGVTG 357


>gi|76811610|ref|YP_333227.1| ABC transporter [Burkholderia pseudomallei 1710b]
 gi|76581063|gb|ABA50538.1| ABC-transporter [Burkholderia pseudomallei 1710b]
          Length = 758

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 16  ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 75

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 76  GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 135

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 136 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 183

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 184 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 243

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 244 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 292

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 293 ----LLYLGLLFVAVVLAAPGG 310


>gi|187924793|ref|YP_001896435.1| branched-chain amino acid ABC transporter inner membrane protein
           [Burkholderia phytofirmans PsJN]
 gi|187715987|gb|ACD17211.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
          Length = 430

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 54/337 (16%), Positives = 116/337 (34%), Gaps = 30/337 (8%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            ++  +   LA++  L +  F+     Q ++ +   Q    ++FA   ++++G  GLLS 
Sbjct: 17  ARWRVLAPWLALILFLAVPPFVWP---QSWLLAYLAQTATMIVFALSYNLLLGETGLLSF 73

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                  +GA     + +R G+ + LL  V  +    CG++ G  S +  G   A+ TL 
Sbjct: 74  GHAAYSGLGALMAAQVFNRIGVPLALLPLVGGIGGALCGVLFGFISTRRAGTAFAMITLG 133

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           + E+             G+AG+ +                     S         Y ++ 
Sbjct: 134 LGELVAAAAWTLPDWFGGEAGVAI------------DRASGVPLGSWSFGPAREAYALIA 181

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
             C L+ +++  L RT        +RDN     ++       +     +S+ F G+AG  
Sbjct: 182 VWCLLACAMMFALSRTPFMRLANAVRDNPVRAAAIGCCPRRVRYGVVVMSAFFAGIAGTL 241

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              + + +S +      +  V+   ++GG  +         +L         +   +   
Sbjct: 242 ALINVELVSTESVGMMRSGAVLIATVIGGTAAFFGPVAGAVVLTFFSVAVASVTRAW--- 298

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                          + +   ++++M    L      
Sbjct: 299 ------------LFYLGLFFIVIVMMSPDGLAGFARR 323


>gi|319405716|emb|CBI79339.1| permease protein of ABC transporter [Bartonella sp. AR 15-3]
          Length = 353

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 66/339 (19%), Positives = 117/339 (34%), Gaps = 7/339 (2%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K   I   L  +   + FLF        Y   +   I I  + A  L+++ G  G+ S
Sbjct: 1   MAKSLNIFLSLVSIIIFISFLFYADNHFNDYTLRIINLIAINAILAISLNLIYGFTGMFS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      AIGAY   I           ++ +   I+     +     +      L+ A +
Sbjct: 61  LGHAGFMAIGAYVCAIFLLSPEQK--EMMWILEPIAEPLKNLQLSFFVAVNISGLSAAII 118

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +   F  + +    +     G     R+  +     +            I +    +  
Sbjct: 119 GLLIAFPVLRLGGDYLGIATLGFAEIIRVLIINAIPLTN----GSLGIKGIPQYATLWWN 174

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
            G    +   I  L ++   N  R IRD++ A   +     F +  +F V + F G+ GA
Sbjct: 175 FGWLAFTIIFISLLLQSNTGNVLRAIRDDEIAAKMMGVNTFFYRCFSFTVGAFFAGIGGA 234

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             AA    I P MF F     ++ IV+ GG+ S++    ++ I+  V+E    +      
Sbjct: 235 LTAALISTIDPKMFNFILTFNILMIVVAGGLGSITGSVISSIIITIVLEWLRIVENPLNL 294

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
             +            +  + L  +IL     LL  R  S
Sbjct: 295 GFIYIP-GVPGLRMVIFSLMLLAIILYWQKGLLGQREFS 332


>gi|319780405|ref|YP_004139881.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166293|gb|ADV09831.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 323

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 59/334 (17%), Positives = 124/334 (37%), Gaps = 33/334 (9%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            K    L  + V   +L  L         +     +++L + +FA   ++++G  GLLS 
Sbjct: 11  AKTSARLEWMLVGLGILALLVAPFLIYPIF----LMKMLCFALFACAFNLLLGYTGLLSF 66

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                +   AY        +G      I +    +   G++MG  +++ +G Y A+ TL 
Sbjct: 67  GHATFFGGAAYFTAHAVKVWGWPPEAGILLGMAGAALLGLVMGFFAIRRQGIYFAMITLA 126

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +S++F    ++                       ++ + R        +   + MYY +L
Sbjct: 127 LSQMFFFFCVQ--------------SPFTQGEDGIQGVPRGMLLGVLDLNVSLNMYYFVL 172

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  +    I  +  +      R+IR+N+    SL  ++   KL AF +S+A  G+AG+ 
Sbjct: 173 AVFLIGVFAIWRIVNSPFGMILRSIRENENRAISLGYSVANYKLGAFVMSAALAGLAGSL 232

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            A      +     +  +  VI + +LGG+ ++       +++IG+        F     
Sbjct: 233 KAIVFQFATLTDVTWQMSGEVILMTLLGGIGTMVGPIIGASLVIGLENTLATSGFPV--- 289

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                       T    +   + +L+    ++  
Sbjct: 290 ------------TIATGLIFMVCVLIFRRGIVGE 311


>gi|261366950|ref|ZP_05979833.1| galactoside ABC transporter, permease protein MglC [Subdoligranulum
           variabile DSM 15176]
 gi|282571068|gb|EFB76603.1| galactoside ABC transporter, permease protein MglC [Subdoligranulum
           variabile DSM 15176]
          Length = 549

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/337 (11%), Positives = 96/337 (28%), Gaps = 22/337 (6%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F L+   Y  I+ +   +  +   +      +   I ++  Q    +  A G++ ++   
Sbjct: 219 FLLKNGLYLAIIVIFIALCIITPIVKNVQLLTVNNILNILQQASPRMFLALGVAGLILLA 278

Query: 64  GL-LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           G  LS+  ++   + A + V+       S++  I     +     + + L          
Sbjct: 279 GTDLSIGRMVGMGMTAATIVMHQGINTGSVFGHIFDFTGLPVIVRVFLALIVCIVLCTIF 338

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
                  +  F+        I+     + +   + +    V         PS  +     
Sbjct: 339 TTIAGFFTAKFKMH----PFISTMANMLVIFGLVTYSTKGVSFGAIETTIPSMIIPKIGG 394

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
              ++L        +     +T        +  N +A      ++    + AF ++    
Sbjct: 395 FPTIILWAIAAVVIVWFIWNKTTFGKNLFAVGGNPEAAAVSGISVFRVTVGAFILAGILY 454

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVE 296
           G                 +     +  I+  ++      GG+  +S +     I   +  
Sbjct: 455 GFGSWLECIRMVGSGSAAYGQGWEMDAIAACVVGGVSFTGGIGKISGVVVGVFIFTALTY 514

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
               +               N++     +I L  V+L
Sbjct: 515 SLTTL-----------GIDTNLQFVFSGIIILVAVML 540


>gi|163854851|ref|YP_001629149.1| branched chain amino acid ABC transporter permease [Bordetella
           petrii DSM 12804]
 gi|163258579|emb|CAP40878.1| probable branched-chain amino acid transport system, permease
           component [Bordetella petrii]
          Length = 317

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 63/297 (21%), Positives = 128/297 (43%), Gaps = 15/297 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +V  L LF +  A     +  S+  ++LIY + A  L++++G  G+++L     +  G
Sbjct: 9   LGLVLALALFPYAAAALGLDFYVSVARRMLIYALAATSLNLILGYGGMVALGHAAFFGAG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   IL +    +  L  P +A+++    +++G  SL+ RG Y  + TL  +++   + 
Sbjct: 69  AYVVGILDAAGIHAALLAWPAAAVVAALLALLVGAVSLRTRGVYFIMITLAFAQMVYYLF 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +  +                       +L  +   P   +      YY++L +  L   +
Sbjct: 129 VSLRQYGG---------------EDGLNLSGYSLLPGIDLADGTSFYYLVLALFVLLMWL 173

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L  +    A + IR+N+    +L   +   KL+AF +S A  G+AGA  A     IS
Sbjct: 174 FGRLVDSRFGAALQGIRENESRMEALGYPVYRLKLTAFVLSGAAAGLAGALLANHNLFIS 233

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           P +  ++++  ++ +V++GG+           +++ + E+      Y+   L     
Sbjct: 234 PSLMHWTQSANLLVMVLVGGIGLRYGGVAGAMLMLALEEVLRMWTEYWHLPLGILLL 290


>gi|134287661|ref|YP_001109827.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|134132311|gb|ABO60046.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia vietnamiensis G4]
          Length = 389

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 91/334 (27%), Gaps = 36/334 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI------- 83
                  +  ++  + L Y   A GL I  G  G+LSL   + + +G Y+  +       
Sbjct: 50  FPLALDTFRLNLMGKYLTYAFVAIGLVIAWGYGGVLSLGQGVFFGLGGYAMAMFLKLEAS 109

Query: 84  -----LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
                           +                          +    L     +     
Sbjct: 110 DPAATHTQTTPGIPDFMDWNQLTALPTWWKPFHSLPFSILAVLVVPTALAFVIGYAMFKR 169

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLL 188
           +   +        VA  L  L    +                 +       ++ +Y+V  
Sbjct: 170 RVGGVYFAIITQAVALILSVLIIGQQGYTGGVNGITDLRTLLGWDIRTDHAKLVLYFVNA 229

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +   +     W++R+ +      +RD +         +   K+ AF +++    + GA 
Sbjct: 230 ALLIGALLAGRWVQRSKLGTLLLAMRDKEDRVRFSGYDVAMFKVFAFCLAAMLAAVGGAM 289

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           F      +SP       +I ++    +GG  SL        ++                 
Sbjct: 290 FTLQVGFMSPSFVGIVPSIEMVVYAAIGGRMSLVGAVYGAILVNLGKSW----------- 338

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              F  SF      LM      V+++  + L  L
Sbjct: 339 ---FSESFPNLWLYLMAAMFIGVVMVFPNGLAGL 369


>gi|297197581|ref|ZP_06914978.1| inner-membrane translocator [Streptomyces sviceus ATCC 29083]
 gi|297146778|gb|EFH28335.1| inner-membrane translocator [Streptomyces sviceus ATCC 29083]
          Length = 357

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 60/309 (19%), Positives = 119/309 (38%), Gaps = 21/309 (6%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
            +  Y   +     ++ + A GLS++ G +GL+SL  +   A G ++   LG    L  W
Sbjct: 51  FTSAYWIQVLTAAAVFSVAALGLSVLYGRVGLISLGQIAMLAAGGWTAQRLGQTGALPFW 110

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L++  + +++G  G+++GLP+L+  G YLA+ TL+++     +L        G   +   
Sbjct: 111 LVLLATGVVTGLIGIVIGLPALRLSGLYLALITLMLAAAVTIVLTNTNFPNGGPGFLGYD 170

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                     R               +   +   + +C L   + +   R     AW  I
Sbjct: 171 PVKSGTVPLARP---------GVAAGDTAYFRYTVVVCALMFLLAIAHTRGRPGRAWAAI 221

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R ++ A  +    +   KL AFA++    G+AGA  AAS   ++   F   E+I +++ +
Sbjct: 222 RQSEHAAVAAGINVTLYKLWAFALACFMTGVAGALLAASAGGLTVYQFPPQESITLLAAL 281

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ++ GM   +       +L  +  L                         +  + L   ++
Sbjct: 282 LMAGMYHFAGAVVTGLMLKAMPALLDTWGVS------------GNVLLIVFGVGLVQTLV 329

Query: 334 MRSHSLLRL 342
                +   
Sbjct: 330 ASPEGIAGR 338


>gi|75674863|ref|YP_317284.1| ABC-type branched-chain amino acid transport system permease
           component [Nitrobacter winogradskyi Nb-255]
 gi|74419733|gb|ABA03932.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Nitrobacter winogradskyi Nb-255]
          Length = 349

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 54/345 (15%), Positives = 120/345 (34%), Gaps = 33/345 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
               L  L     L+  + L A   + +  ++ ++ +I+ + A  L+ +    G +SL  
Sbjct: 15  RSFALSSLITSAVLIALVTLPAVLPEFWTVNIFVRAMIFGIVALSLTFLAHYGGFISLAQ 74

Query: 71  VIAYAIGAYS------YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           ++   +  Y+        I  + + L     + ++ ++S   G+ +G  +++ R  YL +
Sbjct: 75  MVPAGVAGYTIAVTVPDAIPANGFQLPYGPAVALALVLSTVAGLTIGAVAVRTREIYLLM 134

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL ++  F   +       NG  GI                       S  +      Y
Sbjct: 135 ITLAIAVSFYFFVQANVEFLNGYEGIRNVMGP--------------DILSVPLRTPAIFY 180

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           + +L +     ++++++ R  +    + IRDN +   +L   +   ++ AF ++    G+
Sbjct: 181 HAVLAVSVALYALVIYVSRAPLGLVLQGIRDNPRRISALGFNVALHRIVAFGLAGFIAGV 240

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            G         ISP        I ++ I ++GG+           I          +   
Sbjct: 241 GGVLLTFYNIGISPGTVSTHATISILIIAVIGGLGHPIGAFIGAFIFTIFDTFAADIYD- 299

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFL 349
                         R  TL+      +++     ++ L    N L
Sbjct: 300 ------------RDRFNTLIGAVFLTIVVASPDGIIGLIKRGNAL 332


>gi|104780490|ref|YP_606988.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           entomophila L48]
 gi|95109477|emb|CAK14178.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas entomophila L48]
          Length = 307

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 87/290 (30%), Gaps = 2/290 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I  +   +     +P+
Sbjct: 11  LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAMMGIHSLPI 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
              ++    + +                   + +   I  I           +    +  
Sbjct: 71  LMTVAFVATICVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNTVLLSQDSKDK 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   +     F    +  V+       V +        + L++ R+ +  A R   ++ 
Sbjct: 131 SIPNLIPGAFSFGPGGAEEVLVSYMQILVFVVTLIAMTCLTLFISRSRLGRACRACAEDI 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +A    +     I+P+   F   +   +  +LGG
Sbjct: 191 KMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNA-GFLVGLKAFTAAVLGG 249

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           + S+        +L         +    +  ++ F     +       I 
Sbjct: 250 IGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299


>gi|76801645|ref|YP_326653.1| urea/short chain-amides ABC transporter permease [Natronomonas
           pharaonis DSM 2160]
 gi|76557510|emb|CAI49091.1| ABC-type transport system permease protein II (probable substrates
           urea/short chain-amides) [Natronomonas pharaonis DSM
           2160]
          Length = 373

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 53/322 (16%), Positives = 106/322 (32%), Gaps = 11/322 (3%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
              ++  L +    +  +      Q       A  LS+V G  G+LS   V  + + AY+
Sbjct: 35  FVVVVAGLAVYPMTTDPFSIQTTTQYFALAFLALSLSVVWGYCGILSFGQVAFFGVAAYT 94

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           + ++G  +G +  +   +   I         L    F G    +   I++ +   +L  +
Sbjct: 95  FGVIGINFGTAGGITAALLGAIVVGALFAAALGYFMFYGGVRDVYVTIITLVVALVLNTF 154

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE-IFMYYVLLGMCFLSASIIL 199
              T G        RL                  + V ++ +  YY+LL    ++   + 
Sbjct: 155 AAQTAGSEWAIGEARLGGFNGMPDIPDLVLGVGGASVAFDRVAFYYLLLAALVVTYLGLR 214

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
               +        +R+++    +    + F KL  F +  A     G F+A   + I P 
Sbjct: 215 AFVNSGFGMTMVAVREDEARTETFGYNVPFIKLVVFTIGGALAAAGGVFYAVWGNFIDPS 274

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +F      + +  V +GG  SL     AT  +  +                         
Sbjct: 275 VFGILFAALPVVWVSVGGRESLIGAIGATFAIEWMRTGLTD----------GVGPLGPEW 324

Query: 320 HTTLMVIALFLVILMRSHSLLR 341
              ++   L +VIL+    ++ 
Sbjct: 325 AFVIIGGLLMVVILVMPAGIVP 346


>gi|320449593|ref|YP_004201689.1| HmgE [Thermus scotoductus SA-01]
 gi|320149762|gb|ADW21140.1| HmgE [Thermus scotoductus SA-01]
          Length = 322

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 99/314 (31%), Gaps = 12/314 (3%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
              + I    I   +Y M A G ++V G L L++      + IGA   V +       + 
Sbjct: 8   LLPQVIFDGFILGFVYAMVALGYTLVYGVLELINFAHSEIFMIGAVVGVEVFRYLAPQVE 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKF-RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
               +  +     G + G+ ++   R  Y  +     +     ++         +  + +
Sbjct: 68  SGFLLLLLALILGGAVAGITAILVERFAYRPLRKRGTTNRLVPLITAIGVSFILQDLVRL 127

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM-----YYVLLGMCFLSASIILWLRRTAIS 207
            + L+     +R         S  +           + ++     +   +   + RT + 
Sbjct: 128 IEGLWHNEFFLRMRTVEDLEGSVELFGGAIFAQTKSFILMGVSILMLVGLTYLVNRTKLG 187

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
            A R +  +      +           F +  +  G+AG  FA     I+P +  F   I
Sbjct: 188 VAIRAVAQDLHTASLMGIDPDRIISRTFLIGGSLGGVAGVLFALQYTTITPYV-GFLPGI 246

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              +  +LGG+ ++        +L  +            N               +  + 
Sbjct: 247 KAFTAAVLGGIGNIPGAMLGGLVLGQLENFFGTYLPILTNGNFG-----TEYKDVVAFLI 301

Query: 328 LFLVILMRSHSLLR 341
           L L++L+R   LL 
Sbjct: 302 LILILLLRPQGLLG 315


>gi|170077024|ref|YP_001733662.1| branched chain amino acid ABC transporter permease [Synechococcus
           sp. PCC 7002]
 gi|169884693|gb|ACA98406.1| ABC transporter, Branched-chain amino acid transport, permease
           protein [Synechococcus sp. PCC 7002]
          Length = 357

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 93/328 (28%), Gaps = 28/328 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           + +      ++   +  + L   + A G+ ++ G  GLLSL   I +A+G Y+  +  S 
Sbjct: 1   MVILPLILPEFRLKLVGRFLSMAIVALGIDLIWGYTGLLSLGQGIFFALGGYALAMHLSL 60

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                 +             +               +    +       L+    I    
Sbjct: 61  QLPDGAIPEFFMLYGVEKLPLFWQPFYSLPLTLLAMVLVPGIVAGILGYLVFRNRIKGVY 120

Query: 148 AGIYVADRLYFLGTTVRSLIR--------------FFRFPSSFVIYEIFMYYVLLGMCFL 193
             I     L           +              F          ++  Y   +    L
Sbjct: 121 FSIITQAALLVFFNFFNGQQKLINGTNGLKTDTAVFLGQRVGDSGIQLLFYETTIVALLL 180

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              +  WL           IRD++           + K+  FA++ A  G++GA +    
Sbjct: 181 VYLLCRWLTSGRFGRMLIAIRDDETRVRFTGYDPTWFKVVVFAIAGAIAGISGALYTVQS 240

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             I+P+  + + +I ++  V +GG  +L      T ++                      
Sbjct: 241 GIITPNYMEVAFSIEMVISVAVGGRATLIGAIIGTILVNFARIYLSE------------- 287

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
            SF             +V+ +    ++ 
Sbjct: 288 -SFPEIWLFFQGALFLIVVTVLPDGIVG 314


>gi|111222045|ref|YP_712839.1| branched-chain amino acid ABC transporter ATP-binding protein
           [Frankia alni ACN14a]
 gi|111149577|emb|CAJ61270.1| hypothetical protein; putative membrane protein involved in
           branched-chain amino acid transport, ATP-binding
           [Frankia alni ACN14a]
          Length = 926

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 55/294 (18%), Positives = 108/294 (36%), Gaps = 14/294 (4%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R         +  V    +L L     +      +     L YV+    L ++V + G +
Sbjct: 297 RSRALVVPWPVQGVGGAAVLVLLAFIPQIDTLHLTDWTNALSYVILFLSLGLLVRTSGQV 356

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           SL  V   AIG  +   L     L   L + VS +I+   G ++ +P+++  G YLA+AT
Sbjct: 357 SLCHVSFMAIGVSAMSHLTQSEHLPWLLALIVSGLIAIPVGAVLAIPAIRLSGLYLALAT 416

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
                + Q +      +           R      +V S                  YY+
Sbjct: 417 FGFGILLQYMFYTEHYMFGESGVGLTLSRPAVSWLSVSSDK--------------GYYYL 462

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +   +A+  L + R+ +    R + D+     +  ++I   ++  F +S+     AG
Sbjct: 463 VLVLAAAAAATTLMITRSRLGRLLRALADSPVGLATSGSSINVTRILVFCLSAFLAAEAG 522

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           A    S  ++S D +    ++   +++++           A+  LI +  L   
Sbjct: 523 ALQGVSAQQVSGDAYSPLLSLTFFALIMIVPGRDPWYALFASFGLILIPALAAF 576



 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 93/289 (32%), Gaps = 11/289 (3%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +  +   +Y + A GL +   + GL +L       + AY +  L     L   L  
Sbjct: 5   PYLIAGLVTGSVYGLAATGLVLTYKTSGLFNLGHGALATVAAYLFYELNVHANLPWGLAA 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +  ++ G    ++     +  G       +  +  F  +++    +        V  + 
Sbjct: 65  AICVLVGGPVLGLVFELIARSLGSTGLSVRIASTIGFLLVVVSIVSLRYDSTTTRVVPQ- 123

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     +    F             + +     +A++ ++ RR  +  A R + D+
Sbjct: 124 ---------YLPQSSFHLGSTPITAAQVIIAVLGVTATAALAVFFRRARLGAAMRAVVDD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                +  T+ +  +  ++ + + F   +G   A     ++P    F   +       +G
Sbjct: 175 GPLLDAAGTSALSVRRWSWIIGATFAATSGVLLAPLLAELNPLNLTFLV-VTAFGAAAIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
             +SL        ++    +LC         + L     F +    L++
Sbjct: 234 RFSSLPLTYGGGLVIGVAQQLCTKQFTTGVLTGLAPALPFLVLFVVLLI 282


>gi|119897417|ref|YP_932630.1| putative branched-chain amino acid transport permease [Azoarcus sp.
           BH72]
 gi|119669830|emb|CAL93743.1| putative branched-chain amino acid transport permease [Azoarcus sp.
           BH72]
          Length = 330

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 60/306 (19%), Positives = 117/306 (38%), Gaps = 29/306 (9%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y     +++LI ++ A  L+ ++G  G+++L       +GAY+ V +      + W
Sbjct: 28  FGLDYYTGFVMRVLIVMLIATSLNFLMGYGGMVALGHAGFVGVGAYALVAMTEAGITNAW 87

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
            L   + + +    +++G  SL+ RG Y  + TL  +++   + +  +          +A
Sbjct: 88  ALWGGAMLAASVAALLVGAVSLRTRGVYFIMITLAFAQMLYYLAVSLRAYGGDDGYNLMA 147

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             L   G                      +Y+V+L +C L          +    A   +
Sbjct: 148 RPLLGFGLNADDD--------------ATLYWVVLAVCALCFLFFHHAIGSRFGQALIGV 193

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           RDN+    +L   +   KL AF +++A  G+ GA        ISP    +S++ ++I IV
Sbjct: 194 RDNESRMLALGYPVFLLKLQAFVIAAAVAGLGGALMVTQNSFISPSSMHWSQSAVLIVIV 253

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+          A+ + + E+      Y+                  +   L  +IL
Sbjct: 254 VLGGLGHRWGGVIGAAVWVSLEEVLRMSTEYWHWP---------------LGALLIAIIL 298

Query: 334 MRSHSL 339
                L
Sbjct: 299 FAPDGL 304


>gi|317405256|gb|EFV85590.1| urea ABC transporter [Achromobacter xylosoxidans C54]
          Length = 352

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 85/291 (29%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY   ++ + +   +   +      +     ++       
Sbjct: 79  ITFGLMGVINMAHGELLMIGAYVTYLVQTAFRAWLPGWLDWYVAAALPLAFVVTALVGMA 138

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W        G+        +     S +         +
Sbjct: 139 LER--TVIRWLYGRPLETLLATWGISLMLMQGVRTLFGAQNVEVGNPSWMSGGFTVLGGL 196

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+   +   L  T +    R I  N++    +        + AF +
Sbjct: 197 VLTYNRLVIIGFALFVVFLVWALLNHTRLGLFVRAITQNRRMADCVGVPTGRVDMLAFGL 256

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG   A S+             +    +V+LGG+  L+    A   L GV + 
Sbjct: 257 GSGIAGLAGV--ALSQLGNVGPDLGRGYIVDSFMVVVLGGVGQLAGTVIAALGLGGVNKF 314

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                     +++ + L +  R   L   R  S  
Sbjct: 315 LEPYAGAVMAK-------------ITILVLIVLFVQKRPQGLFAPRGRSVE 352


>gi|241258639|ref|YP_002978523.1| ABC transporter related [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240863109|gb|ACS60772.1| ABC transporter related [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 861

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 91/299 (30%), Gaps = 23/299 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +  L        + + +      S   + ++ +   + ++ A    +VV     + 
Sbjct: 544 LARRELGLFAAIAAVVIPISILNIRMLSGANLSALAMDAGLLMIVAVAQMLVV-ITRSID 602

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+      + AY        +     +     A + G     +    + +      + TL
Sbjct: 603 LSVAAIIGLAAYGAASTIHLHPEIGVMGGVALACVIGLAAGFLNGLIVTYGRVPAIVVTL 662

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               IF+                   + L+  GT V +      +          +  VL
Sbjct: 663 GTMSIFR-----------------GINSLWAGGTQVSADQVPQAWLDMTAANIFGVPAVL 705

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L        +   LR T+I      I  N      +        L AF+ +    G  GA
Sbjct: 706 LIAIATLLVVAYILRNTSIGRELFAIGSNPGGASLIGIPSRARILMAFSAAGLLAGFDGA 765

Query: 248 FFAASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGM 301
            +A+    +   +    E  ++ ++V+      GG  ++  +A    +L+ +      +
Sbjct: 766 LWASRYATVDARVAYGFELTVIAAVVVGGIAVRGGSGTVLGVAAGALMLLIINNGLTLV 824


>gi|116748280|ref|YP_844967.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
 gi|116697344|gb|ABK16532.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
          Length = 301

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 100/305 (32%), Gaps = 16/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L L++      + +GAY  + L S   L   L    
Sbjct: 8   LTNGLAVGSIYALIALGYTMVYGVLKLINFAHSDLFTLGAYLGLTLLSSLLLVDRLGPLG 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A++  A  M +   +                 +  + ++     +       +      
Sbjct: 68  GALVLAAMVMGLVAVAGALLDRVAYRPLRESPRL--SAVVSALGASIFLQNTIMLIYGAR 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  ++         V   +    +L     + A + +++++T I  A R    +Q 
Sbjct: 126 YRVYPPDILPKASIHMLGVDIPLVRILILGASVIMMAGLFVFIQKTRIGTAIRAAAIDQG 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    L  F V  A  G AG        +I+  M  +   +   +  ILGG+
Sbjct: 186 AARLMGIDVNRVILLVFMVGPALGGAAGLMVGLYYGQINFTM-GWGYGLKAFTAAILGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L  +  +      + +   + F               L L++++R   
Sbjct: 245 GNIPGAMVGGILLGLIESMSAAYLSFAWKDAIAFC-------------VLILILIVRPTG 291

Query: 339 LLRLR 343
           LL  R
Sbjct: 292 LLGER 296


>gi|209515135|ref|ZP_03264003.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209504389|gb|EEA04377.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 328

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 69/310 (22%), Positives = 119/310 (38%), Gaps = 30/310 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
               + Y   +    L++V+   GL++ VG  G  SL       IGAY+  IL       
Sbjct: 20  PPFLKNYGVYLSSYWLVFVIATMGLNLTVGYAGQKSLGHAAFLGIGAYTAAILLKAGIS- 78

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            WL +P++ ++    G+I+G P+L+ R  YLA ATL  +     ++   + +T G  G+ 
Sbjct: 79  FWLGLPLAMIVCFLVGLILGFPALRVRTIYLAFATLGFNTAVWLVIRNEEWLTGGTYGLN 138

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              R                     +   +  YY++L +  L    +  L  +    A+ 
Sbjct: 139 GITRPSIF--------------GFSLANSLAFYYLILVVAILLGLALWRLLGSPWGKAFT 184

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +RDN     SL        L +FA+ +A+ G AGA  A   + + P  F    +I++  
Sbjct: 185 ALRDNPIRAESLGIDTRRYTLLSFAIGAAYAGAAGALLAPLVEFMDPAPFTVGASIMMYL 244

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +V++GG           A+ I + E                       +     I +F +
Sbjct: 245 MVVVGGAGYFFGPLVGAAVGIVLPEWLRFAQG---------------WYLFAFGITVFAL 289

Query: 332 ILMRSHSLLR 341
           +L     LL 
Sbjct: 290 MLWLPDGLLS 299


>gi|319791076|ref|YP_004152716.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315593539|gb|ADU34605.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 320

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 62/324 (19%), Positives = 131/324 (40%), Gaps = 29/324 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L  V   L  F  +       +      ++LI  + A  L+ ++G  G+++L      
Sbjct: 8   IGLGLVFLLLAAFPLIAPLFGLDFYIGFVRRVLIVALAAASLNFILGFGGMVALGHAGFI 67

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY+ V L     +S W++ P++A+++G    ++G  +L+ RG Y  + TL  +++  
Sbjct: 68  GMGAYTVVALSDAGVMSAWVMWPLAALVAGLVAALIGTVALRTRGVYFIMTTLAFAQMLY 127

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +++  +    G  G  +  R                 P   +  E   Y+V+L +  L+
Sbjct: 128 FVVVSLRR-YGGDDGYTLMSRPT-------------LLPGLDLGNESNFYWVVLVIVALA 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +    ++   +A   IRDN+    +L   +   +L AFA++ A  G+AGA  A    
Sbjct: 174 LWWLHRATQSRFGHALMGIRDNETRMRALGYPVFRLQLVAFAIAGAIAGLAGALLAGGNG 233

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            +SP    ++++  ++ +V++GG+           + + + E       ++         
Sbjct: 234 FVSPATMHWTQSATLLVMVVIGGLGRSWGGPVGAIVWLLLEEFLKQHTEHWH-------- 285

Query: 315 SFNMRHTTLMVIALFLVILMRSHS 338
                    + + L  V L     
Sbjct: 286 -------MPLGLLLIAVALWAPKG 302


>gi|83746320|ref|ZP_00943373.1| amide-urea transport system permease protein [Ralstonia
           solanacearum UW551]
 gi|207742758|ref|YP_002259150.1| permease transporter protein [Ralstonia solanacearum IPO1609]
 gi|83727070|gb|EAP74195.1| amide-urea transport system permease protein [Ralstonia
           solanacearum UW551]
 gi|206594152|emb|CAQ61079.1| permease transporter protein [Ralstonia solanacearum IPO1609]
          Length = 406

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/347 (13%), Positives = 97/347 (27%), Gaps = 32/347 (9%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            +L  + V    L+     A     Y  ++  +I+ Y + A  L +V G  G+LSL   +
Sbjct: 32  SLLVCIGVPVCALVVPQGHALHLSAYALTLVGKIMCYALAALALDLVWGYCGILSLGHGL 91

Query: 73  AYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
            +A+G Y+  +                                          +++ L  
Sbjct: 92  FFALGGYAMGMYLMRAIGRDGVYQSDLPDFMVFLDWKALPWFWHGTEHFAWAALLVVLVP 151

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
                 +   A     +     +I            +  +  +          R   FP 
Sbjct: 152 GVLAWLFGFFAFRSRVKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGFPI 211

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
           + V     ++        L+      +  +        IRD +        + +  KL  
Sbjct: 212 AAVSTRTVLFVATFIALVLAFIACRAIVTSKFGRVVTAIRDAEARAMFCGYSPLGYKLLV 271

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           +  S+   G+AGA +      I+P       +I +   V +GG  +L        ++ G 
Sbjct: 272 WTFSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAVWVAVGGRGTLVGPIVGAFLVNGA 331

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             +                         ++     LV L   + +L 
Sbjct: 332 KTVLTAW--------------VPEYWLFVLGAVFVLVTLFLPNGVLG 364


>gi|253580172|ref|ZP_04857439.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848691|gb|EES76654.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 295

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 104/306 (33%), Gaps = 24/306 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S      +Y + A G ++V G   +L+        +G+Y   +  S  GL+  L I
Sbjct: 6   SYLISGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMVGSYVVYVAVSGMGLNPILAI 65

Query: 97  PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
            +S +I    G+++   +    R     +A LI +     +L     +  G      ++ 
Sbjct: 66  LLSIIICTLMGVVIEGVAYRPLRNAASPLAVLITAIGVSYLLQNVALLIWGADTKSFSNV 125

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           +      +             ++        ++G   + A ++L++ +T    A   + +
Sbjct: 126 ISLPSLKLAG---------GSIVITGVTIVTIIGGILIMAGLMLFISKTKTGQAMLAVSE 176

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A   +   +       FA+ S    +AG    ++   ++P        I      + 
Sbjct: 177 DKGAAQLMGINVNKTISITFAIGSGLAAIAGVLLCSAYPSLTPYT-GAMPGIKAFVAAVF 235

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S+        +L  +               + F               L +V++++
Sbjct: 236 GGIGSIPGAFIGGVVLGILEIFGKAYISSQMADAIVFG-------------VLIVVLVVK 282

Query: 336 SHSLLR 341
              +L 
Sbjct: 283 PTGILG 288


>gi|241663092|ref|YP_002981452.1| inner-membrane translocator [Ralstonia pickettii 12D]
 gi|240865119|gb|ACS62780.1| inner-membrane translocator [Ralstonia pickettii 12D]
          Length = 444

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 49/338 (14%), Positives = 112/338 (33%), Gaps = 8/338 (2%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M    + L ++      +      L+ + L     Q +  ++  Q+ I ++FA   ++++
Sbjct: 24  MKFKPVNLARW------MLWGTTALVMIVLPLIWPQGFAITLLSQMGIMIIFALSYNMLL 77

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G+LS    +   +GA+  V L +   +     + +   ++ A   I G       G 
Sbjct: 78  GQSGMLSFGHAVYAGLGAFMAVHLLN--KIGAVQALGIGGPLAVALLPIAGGLGGALFGV 135

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
                T   S     ++          + +   D     G    +               
Sbjct: 136 IFGYVTTKKSGTTFAMITLGIGEMVFASALMFPDFFGGEGGVSTNRSIGDALAGVTFGPA 195

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             +YY++   C +S +++    +T +      +RDN +    +       +     +S+ 
Sbjct: 196 RQVYYLIAAWCLISMALMYAWTQTPLGRIANAVRDNPERVEFIGYNTQRVRFLVVILSAF 255

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           F G+AGA    + + ++ +      +  V+    +GGM S         + +       G
Sbjct: 256 FAGIAGALSCINFEIVTAENVSAVRSGSVLLAAFIGGMGSFFGPIIGAVLTVFFTVALSG 315

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +   +   L  F     M     +   L + + +    
Sbjct: 316 ITKAWLLYLGLFFVLMVMYAPGGIASLLVMHLPILRRG 353


>gi|83311127|ref|YP_421391.1| ABC-type branched-chain amino acid transport system
           [Magnetospirillum magneticum AMB-1]
 gi|82945968|dbj|BAE50832.1| ABC-type branched-chain amino acid transport system
           [Magnetospirillum magneticum AMB-1]
          Length = 329

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 58/315 (18%), Positives = 112/315 (35%), Gaps = 19/315 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S+ I +L+        ++++G  G  SL   +   +GAY+   L   YG   W+  
Sbjct: 29  DYVLSILITVLLQAYLGMSWNVMMGFAGQFSLGHALYVGLGAYAGGALFVHYGTPPWIGA 88

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                +S A G ++G    +F+   +  A L ++      ++       G +        
Sbjct: 89  LAGMAVSAAVGAVVGTLGFRFKVMGVYFALLTIAFAEFTRVLFDHWGWVGASSGLFLPPA 148

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                      YYV L M   +      L    I   W+ IR++
Sbjct: 149 PNNSPD---------NLWLLRGSTTMFYYVALAMAAGAFWFSRALLMRRIGFYWQAIRED 199

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVISIVIL 275
           Q A  +L   +   K+ A  +S++   + G F A   + + P+  F    +I ++   I+
Sbjct: 200 QDAADALGIDVFKNKMIAVLISASMTSLGGVFLAFFNNNLYPESIFSMHRSIELMLGTII 259

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ +L        +L  + E           ++L      +        I L L+++++
Sbjct: 260 GGIGTLFGPILGAVVLTALGEGL---------TILGAHIGIDGVKQIAYGICLMLILVLK 310

Query: 336 SHSLLRLRTPSNFLE 350
              L      +  LE
Sbjct: 311 PGGLWPWLRKAFRLE 325


>gi|254706462|ref|ZP_05168290.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella pinnipedialis M163/99/10]
 gi|261313914|ref|ZP_05953111.1| predicted protein [Brucella pinnipedialis M163/99/10]
 gi|261302940|gb|EEY06437.1| predicted protein [Brucella pinnipedialis M163/99/10]
          Length = 570

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91
               KY   +   + I  +    L +V G  G++SL  +    +GA+ +  +        
Sbjct: 24  LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + + + +  + +   G+ +GLP+L+ RG  LAI TL  +  F  +L              
Sbjct: 84  LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFYMVLATIT---------- 133

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                       +   +  +L    + A ++ ++  + +  +W 
Sbjct: 134 ----------FPGQTSFTQVARPDLFANDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R +++A  +   +I  AKLSAFA+S+   G++G   A     +  + F   +++ + +
Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  + G            +++   EL   +N       + F       
Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291


>gi|108758901|ref|YP_634781.1| branched-chain amino acid ABC transporter permease LivH [Myxococcus
           xanthus DK 1622]
 gi|108462781|gb|ABF87966.1| branched-chain amino acid ABC transporter, permease protein LivH
           [Myxococcus xanthus DK 1622]
          Length = 306

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 91/307 (29%), Gaps = 17/307 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95
           + +      IY + A G ++V G L L++        +G    Y+      R   S  L 
Sbjct: 8   LINGLAAGTIYALVALGYTMVYGVLKLINFAHGDVMMVGVYMGYATAFALGRDMRSSLLG 67

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + V   ++     ++G    +F    L     + + I    +             ++   
Sbjct: 68  VAVVFAVAMLGCALLGFLIERFAYRPLREKPRLTALITAIGISFALSYGFQLDLGFLPGA 127

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                  V   + +       V+   +          L   +   + RT    A R +  
Sbjct: 128 APRAFPEVIEPVEWLVIGDRDVVVWNWQVISFGIAVALMVGLQYLVFRTRFGRAMRAVSW 187

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           + +    +           F +SSA    AG  +A     +SP M      +      ++
Sbjct: 188 DHRVAALMGIPTDRVIALTFMLSSALAAGAGLLYAIKDTSVSPLM-GLYVGLKAFVAAVI 246

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  +        +L  V E   G     +   + F               L LV+L++
Sbjct: 247 GGIGHVPGAVVGGLVLGLVEEFVVGYAASTWRDAVAFGF-------------LILVLLVK 293

Query: 336 SHSLLRL 342
              L   
Sbjct: 294 PGGLFGR 300


>gi|302669705|ref|YP_003829665.1| branched-chain amino acid ABC transporter permease LivH
           [Butyrivibrio proteoclasticus B316]
 gi|302394178|gb|ADL33083.1| branched-chain amino acid ABC transporter permease protein LivH
           [Butyrivibrio proteoclasticus B316]
          Length = 295

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/308 (15%), Positives = 100/308 (32%), Gaps = 24/308 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  S      IY + A G ++V G   +L+        +G Y    +      +  + I
Sbjct: 6   TYFISGLSLGSIYAIIALGYTMVYGIAKMLNFAHGDFIMVGCYIIFSVSGALSGNSLVGI 65

Query: 97  PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
            V+ ++    G+     +    RG    +A LI +      L     +  G         
Sbjct: 66  LVAIVLCTLLGITTEFVAYRPLRGATSPLAVLITAIGVSYFLENVALLIFGADIKSFTSV 125

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           + + G T              +  +      ++    +   +  ++ +T    A   + +
Sbjct: 126 IKWEGLTFAD---------GNLRIQGVTIITIVISIIVLIVLEAFINKTKQGQAMLAVAE 176

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A   +   +    +  FA+ SA   +AGA   ++   +SP        I      +L
Sbjct: 177 DKGAAALMGINVNKTIMLTFAIGSALAAVAGALLCSAYPSLSPYT-GAMPGIKAFVAAVL 235

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S+        +L  V  L         +  + F               L +V+L++
Sbjct: 236 GGIGSIPGAMIGGLVLGIVEILSKTYISSQLSDAIVFG-------------ILVIVLLVK 282

Query: 336 SHSLLRLR 343
              +L  +
Sbjct: 283 PTGILGKK 290


>gi|239832608|ref|ZP_04680937.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301]
 gi|239824875|gb|EEQ96443.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301]
          Length = 329

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 56/337 (16%), Positives = 131/337 (38%), Gaps = 33/337 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +   L+  L         +     +++L + +FA   ++++G  G+LS      +
Sbjct: 23  LSAVILGIALVGLLAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 78

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              AY        +G++  L + +  + + A G+++G  +++ +G Y  + TL ++++F 
Sbjct: 79  GGAAYITAHTVKVWGVTPELGLVLGVLAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 138

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              ++                       ++ + R   F    +   + MYY +L +  L 
Sbjct: 139 FFCLQASFTHG--------------EDGLQGVPRGHLFGIIDLNQPMTMYYFVLAVFVLG 184

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +I  +  +      +++R+N+    SL  ++   KL+AF +S+A  G+AG   A    
Sbjct: 185 VFVIWRIINSPFGMILKSVRENENRAISLGYSVNRYKLAAFVMSAALAGLAGGLKALVFQ 244

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             +     +  +  VI + +LGG+ +L       A ++ +       +F           
Sbjct: 245 FATLTDVGWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNYLATSDFPV--------- 295

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 T +  +     +L+    ++     S   +R
Sbjct: 296 ------TIVTGVIFMACVLLFRKGIIGEFYASRLGKR 326


>gi|146337631|ref|YP_001202679.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. ORS278]
 gi|146190437|emb|CAL74436.1| putative branched-chain amino acid ABC transporter, permease
           protein [Bradyrhizobium sp. ORS278]
          Length = 356

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 55/322 (17%), Positives = 114/322 (35%), Gaps = 13/322 (4%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---R 87
                     ++  +I I+        +++G  G +S    + Y IG+Y+  I       
Sbjct: 29  PFIFPGAKALNVAAKICIFAALVASYDLLLGYTGSVSFAHTMFYGIGSYAIAIALYGLGP 88

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
              S+ + +     ++    + +GL SL+    + A+ TL ++  F  +  +   +T G+
Sbjct: 89  NWTSVAVAVAAGLPLALLLALAIGLFSLRVEAIFFAMITLAIASAFLVLASQLSWLTGGE 148

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
            G           +TV     +F FP +     I  YY++L  C L    +L +  +   
Sbjct: 149 DGRSFQLPELLRPSTVFIGKEWFGFPING---RILTYYLVLSACALMILALLRVVNSPFG 205

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSEN 266
              + IR+N+    +L    +F    A  +++     AG   A       PD    FS  
Sbjct: 206 RVLQAIRENRFRAEALGYRTVFHLTYANCIAAVIAACAGMLNALWLRYAGPDTSLAFSIM 265

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF------NMRH 320
           + ++ +V++GGM ++       AI I        +     ++                R 
Sbjct: 266 LDILLMVVIGGMGTIYGAIIGAAIFILAQNYLQALMGIASSAAADAGLPLLPGLLHPDRW 325

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
              + +     +      ++  
Sbjct: 326 LLWLGLLFIASVYFFPTGVVGR 347


>gi|92119106|ref|YP_578835.1| inner-membrane translocator [Nitrobacter hamburgensis X14]
 gi|91802000|gb|ABE64375.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Nitrobacter hamburgensis X14]
          Length = 315

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 61/324 (18%), Positives = 117/324 (36%), Gaps = 38/324 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A+V   L+ L          +   GI  L+  + A G +I+ G  G  S    + Y +G
Sbjct: 6   IALVVAALVVLAAVPWFGSDVLIQFGINALLLAVLAQGWNIIGGYTGYASFGNSVFYGLG 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           +Y   I  +++ L   + +     ++    +++G+P L+ RG Y AIATL ++++   I+
Sbjct: 66  SYGVGIAMAQWHLPFGVGLAFGVALAVTFAVLLGIPVLRLRGHYFAIATLALAQVMIAIV 125

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                                    V    +        +  +   Y + LG+  L+   
Sbjct: 126 SN-----------------------VTLAGQNIGLVLPPLNNDPLFYELSLGLLVLATLT 162

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           + WL R+        +R+N++    +       K  AFA+S  F  +AG   A     I 
Sbjct: 163 VFWLTRSRFGFGLIAVRENEEGAEVMGVNTTLYKTMAFALSGVFCSLAGGIHAYWVTFID 222

Query: 258 PDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P+  F  S N+ +I + + GG  ++         L  + E                    
Sbjct: 223 PESAFDISLNVKMIIMAVFGGPGTILGPVVGALSLSAISEFLSS--------------EI 268

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
               +    I +   +++    L 
Sbjct: 269 TSLASLFFGIVVVAAVVLMPRGLA 292


>gi|121611807|ref|YP_999614.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121556447|gb|ABM60596.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 351

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/339 (12%), Positives = 96/339 (28%), Gaps = 27/339 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  +   LLL   +       +  ++  + L +   A G+ +  G  G+LSL   + + +
Sbjct: 13  LAGMAAVLLLLAVVLPATLDPFRLNLVSKYLAFAFVAVGVVLTWGYGGVLSLGQGMFFGL 72

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G Y   +       +  L   +                         +A   +     + 
Sbjct: 73  GGYMMAMFLKLEASAPELPDFMVWSSVEQLPWWWIPFHSLGWTVAGILAIPAVLAYLFSY 132

Query: 137 LIKWKPITNGKAGIYV-------------ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
            I  + ++     I                         +           +    +  M
Sbjct: 133 AIFKRRVSGVYFAIVTLSLALALTVVVVGQQGETGGANGITDFRTLLGRDITGDDAKRVM 192

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           Y+V +    L  ++ L + R+        IRD +             K   FA+++    
Sbjct: 193 YFVEVLAIALVMAVSLVIVRSRFGKILIAIRDKEDRVRFSGYDTAHMKAFVFALAAVLSA 252

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           + GAF++     I+P +     ++ ++    +GG  S+        ++  +         
Sbjct: 253 IGGAFYSLQVGLIAPGVIGVVASVEMVIYAAVGGRLSIPGAVIGALLIGFLKSYLSE--- 309

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                      +F       +     LV+    + L  L
Sbjct: 310 -----------TFPEGWLYFLGAVFILVVWAMPNGLAGL 337


>gi|42524745|ref|NP_970125.1| branched-chain amino acid ABC transporter, permease protein
           [Bdellovibrio bacteriovorus HD100]
 gi|39576955|emb|CAE78184.1| branched-chain amino acid ABC transporter, permease protein
           [Bdellovibrio bacteriovorus HD100]
          Length = 300

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 84/303 (27%), Gaps = 17/303 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L +++      Y +GA++        G+        
Sbjct: 8   LINGVSLGSIYALIALGYTMVYGILKMINFAHSDVYMVGAFAAYYFARWLGIENNPGFST 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +     +   L  L              +    N+LI    ++              
Sbjct: 68  LLTLIVITMICCSLLGLVIERLAYRPLR---NSPKLNVLITAIGVSLFLQYSGQVVFGAD 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +  F  F    V    F   VL         +   L +T +  A R +  N  
Sbjct: 125 PKVFPEVMKDFVIFSIGIVEVRSFDVTVLGVGIVAMLGLQFLLFKTKMGRAMRAVSANPM 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           F V S+  G+          +I P M      +      +LGG+
Sbjct: 185 VASLMGVNPDRIIAFTFVVGSSLAGIGSVLVGMKYPKIDPLM-GMMIGMKAFVAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        I+    E+        +   L F               L ++++ +   
Sbjct: 244 GNVGGAVLGAMIMGLSEEMVVAYLSSTYRDALAFG-------------ILIVILIFKPAG 290

Query: 339 LLR 341
           LL 
Sbjct: 291 LLG 293


>gi|159043412|ref|YP_001532206.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12]
 gi|157911172|gb|ABV92605.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12]
          Length = 324

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 54/292 (18%), Positives = 104/292 (35%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
               A+   LL          + +  ++  ++ I  +   GL++ +G  G++SL   + +
Sbjct: 6   WINFAIALGLLAVPLWAWVADEPFTITLATRVAILALAGVGLNLALGLGGMVSLGHALFF 65

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IG Y+  IL         L+     +       ++ L ++            +      
Sbjct: 66  GIGGYAMGILAHHAQTFDPLMEAPFVIEGTKSMPVIWLTAMALSALAALAVGALSLRTTG 125

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              I            +      + G    S+     FP    +  I  + +  G+  L+
Sbjct: 126 VYFIMITLAFGQMFYYFAISWPAYGGEDGLSIYVRNGFPGLNTLDPIQFFLLCYGLLLLA 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   +  +    A  T R       +L  +    +L AF +S A  G+AGA FA    
Sbjct: 186 LFVCARITASPFGLALSTARQAPARAETLGFSPFRLRLIAFTISGAITGLAGALFADLNR 245

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
            +SP MF +  +  ++  VILGG+  L       A+ I +     G++ Y+ 
Sbjct: 246 FVSPAMFSWHTSGEIMVFVILGGVARLFGPVAGAALFILLEHWLGGLSEYWL 297


>gi|6996599|emb|CAB75549.1| integral membrane protein [Rhizobium leguminosarum bv. viciae]
          Length = 300

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 95/304 (31%), Gaps = 17/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G +G+++      + +G ++ +I+          L   
Sbjct: 8   LLNGLTLGSIYGLVAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLVLTSIFAGLPVA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +++     ++      +  + +A   L  S     ++            I V      
Sbjct: 68  VLLLAMLVVAMLMTSLWNWTIERVAYRPLRGSFRLAPLITAIGMSITLSNFIQVTQGPRN 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +    +    +   +    +++    L       + RTA+  A R    ++K
Sbjct: 128 KPI---PPMVSSVYQFGNISVSLKQIIIIVITAVLLTIFWYIVNRTALGRAQRATEQDRK 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       F + +A   +AG  +       S +   F+  +   +  +LGG+
Sbjct: 185 MAALLGVNVDQTISITFVMGAALAAVAGTMYLMYYGVASFND-GFTPGVKAFTAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        ++  +  L        +  +  F               L  V++ +   
Sbjct: 244 GSLPGAVFGGLLIGLIESLWSAYFTIAYKDVATF-------------AILAFVLIFKPTG 290

Query: 339 LLRL 342
           +L  
Sbjct: 291 ILGR 294


>gi|53725043|ref|YP_102636.1| branched-chain amino acid ABC transporter permease/ATP binding
           protein [Burkholderia mallei ATCC 23344]
 gi|52428466|gb|AAU49059.1| branched-chain amino acid ABC transporter, permease/ATP binding
           protein, putative [Burkholderia mallei ATCC 23344]
          Length = 761

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 16  ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 75

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 76  GAFVAAHSFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 135

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 136 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 183

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 184 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 243

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 244 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 292

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 293 ----LLYLGLLFVAVVLAAPGG 310


>gi|322368598|ref|ZP_08043166.1| branched-chain amino acid ABC transporter permease protein
           [Haladaptatus paucihalophilus DX253]
 gi|320551882|gb|EFW93528.1| branched-chain amino acid ABC transporter permease protein
           [Haladaptatus paucihalophilus DX253]
          Length = 336

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/338 (13%), Positives = 104/338 (30%), Gaps = 17/338 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +        L  FL  +           +  +YVM A GL+++ G +G+L+        
Sbjct: 3   LVPLAGVGSALGDFLRPSTLASVFIQGLAKAALYVMIASGLTLIFGLMGVLNFAHGSLTM 62

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY   ++   +  +    I   A+   A  ++  L +       + +   +       
Sbjct: 63  LGAYLGGLVMVAFVAAGGSSITRLALFFVAVVVVFALLAGLGTAVEVGLIRKLYDRPPVY 122

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM---------YYV 186
            ++    +T     +     L++           F     F+  +I +          + 
Sbjct: 123 QILLTFGLTLVLNELVRIAVLFYGMQPQTDWQDAFGTKPGFLTNQIGLGSVSVNGLALFE 182

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +       A I  +L RT      R   ++ +   +L   +       FA+ +   G+AG
Sbjct: 183 IAFGVLTVAGIWAFLTRTRYGLVIRAGSEDAEMTEALGIDVRRVFTVVFALGTGLAGIAG 242

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                     +         +    +VI+GG+ +      A  ++  V            
Sbjct: 243 VLLMWDPKWGASVPVASEALLPAFVVVIVGGLGTFRGTVVAALLVGMVDAAMS------- 295

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                    F       + + L +V+++R   L  +  
Sbjct: 296 -WWFVNAIDFAGLPEMTIFLILVVVLILRPQGLFGVEE 332


>gi|217423750|ref|ZP_03455251.1| ABC transporter, permease/ATP-binding protein [Burkholderia
           pseudomallei 576]
 gi|217393608|gb|EEC33629.1| ABC transporter, permease/ATP-binding protein [Burkholderia
           pseudomallei 576]
          Length = 776

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 4   ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 64  GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298


>gi|126731597|ref|ZP_01747402.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Sagittula stellata E-37]
 gi|126707763|gb|EBA06824.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Sagittula stellata E-37]
          Length = 331

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 91/273 (33%), Gaps = 11/273 (4%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-YGL 90
                  +  +    LI  +FA   +++ G  GL S      +AIGAY         + L
Sbjct: 30  PDLLNPGLLFIVGMTLIQSIFALSWNLLFGFTGLASFGHAGFFAIGAYFTGAALRYDFPL 89

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             ++++ ++ +      +I+G+ +LK           +      + +I + P    + G+
Sbjct: 90  PFFVVLAIAGLGGALVALIIGVVALKRLTGIFLAVLTVALTEALSKIISFTPALGEQDGL 149

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R        +  +                Y  L+    L  + +  +  + +   +
Sbjct: 150 GSIPRPIIDLGLFQMDLTHVND----------YYRFLVVASVLIIAGLWCVVHSRLGRTF 199

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             IR++      +   +   ++ +F +S     +AGA  A     ++ D   +  +   I
Sbjct: 200 CAIREDADRARFVGINVARFRVISFMISGGTAALAGALSAPWTRIVTLDQVNWLASTQPI 259

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
              +LGG TS       +A    +         
Sbjct: 260 LNSLLGGFTSFWGPIVGSAAFSVISHWTRPFPG 292


>gi|219848760|ref|YP_002463193.1| inner-membrane translocator [Chloroflexus aggregans DSM 9485]
 gi|219543019|gb|ACL24757.1| inner-membrane translocator [Chloroflexus aggregans DSM 9485]
          Length = 388

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/347 (14%), Positives = 106/347 (30%), Gaps = 24/347 (6%)

Query: 15  LCLLAVVYPLLLFLFLG------ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           L LL +V+ L+L                + I    ++  ++   A G ++V G L  ++ 
Sbjct: 41  LALLVIVFALILSPSQPDIMQRVTIILPQVIIDGLVRGFLFATIALGYTMVYGVLEFINF 100

Query: 69  NCVIAYAIGAYSYV-----------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
                + IG                +      + + L++ V+    G   + +   + + 
Sbjct: 101 AHGEIFMIGGVVGATVSFILVSSGTLNSIPPLVFVLLVVLVAMAFCGTLAVTVERIAYRP 160

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPI--TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
             +   +  LI +     IL     +  TN   G     +    G  ++         S 
Sbjct: 161 LRNAPRLVPLISAIGMSLILQDLARLVMTNTPLGFNARYQTPDFGPPIQLFTMQVGERSV 220

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
            VI        ++    +   +   +  T +  A R    +      +   +       F
Sbjct: 221 PVILSPRDLIFIVTATLMLIVLNYVVNVTKLGKAIRATAQDMPTASLMGIDVNRIIALTF 280

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            +  A  G AGA F      ++P M      +   +  +LGG+ +++       +L  + 
Sbjct: 281 LIGGALGGAAGALFGLRIGTVNPYM-GLIPGLKAFTAAVLGGIGNITGAMVGGIVLGFLE 339

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                    +       + S            L L+++ R   LL  
Sbjct: 340 AFVAAYLSIFTAG----NFSGAAYADIAAFSILILLLIFRPSGLLGE 382


>gi|126434914|ref|YP_001070605.1| inner-membrane translocator [Mycobacterium sp. JLS]
 gi|126234714|gb|ABN98114.1| urea ABC transporter membrane protein [Mycobacterium sp. JLS]
          Length = 367

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/357 (13%), Positives = 107/357 (29%), Gaps = 35/357 (9%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M  F  R   +        +++ +   +         +   +  + L + + A G+ +  
Sbjct: 1   MRTFVGRWQTWAGFGVAALLLFAVAPAVL------SDFRLGLLGKFLCFAIVAVGIGLAW 54

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI---------------WLLIPVSAMISGA 105
           G  G+L L   + + +G Y   +        +                L    +   S A
Sbjct: 55  GRGGMLVLGQGVFFGLGGYMMGMHLKISDAQLRGDDVPDFMQIAGVRELPGYWAPFASPA 114

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
             ++  +         L               I  + +    A + V          + +
Sbjct: 115 FTLLAIVVIPTGIAAVLGFGVFKRRVKGAYFAILSQALAAALAILLVGQTGLGGSNGLTN 174

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
              FF F  +  + +  +Y++   +  +  +++  L ++        +RD ++    L  
Sbjct: 175 FRTFFGFALNDPVNKQMLYFIAAAVLLIVVAVVRQLMQSRYGELLVAVRDGEERVRFLGY 234

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                K+ A+ V++    +AGA FA     ++P       +I  +  V +GG T+L    
Sbjct: 235 DPANIKVVAYTVAALCASIAGALFAPIVGFMAPSQVGILPSIAFLIGVAIGGRTTLLGPV 294

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                +     L              F   F         +   +V+      L  L
Sbjct: 295 LGAIGVAWAQTL--------------FSERFPSEWIYAQGLLFIVVVGFFPAGLAGL 337


>gi|283785218|ref|YP_003365083.1| branched-chain amino acid transport system, permease component
           [Citrobacter rodentium ICC168]
 gi|282948672|emb|CBG88264.1| putative branched-chain amino acid transport system, permease
           component [Citrobacter rodentium ICC168]
          Length = 524

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 74/288 (25%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAY   ++           +    + +     +        
Sbjct: 251 ITYGLLGVINMAHGEMLMLGAYCTWMVQQTMAQLAPQWLAFYPLFALPVAFLFTAVVGMI 310

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      L       +       + +
Sbjct: 311 LER--GVIRHLYGRPLETLLATWGISLMLIQLVRMTFGAQNLEVANPPWLSGGVQVYAGL 368

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       VL     +     L L +T +    R +  N+              + AF +
Sbjct: 369 VLPWNRIVVLGFTLLVLFFTWLVLNKTRLGLRVRAVTQNRSMAACCGVPTGRVDMLAFGL 428

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+             I    +V+LGG+  L+    A   L    ++
Sbjct: 429 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGSVAAAFGLGVFNKI 486

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      ++                        R   L  L+  
Sbjct: 487 LEPQMGAVLGKIVILLLIILFIQK-------------RPQGLFALKGR 521


>gi|241206018|ref|YP_002977114.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240859908|gb|ACS57575.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 300

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 95/304 (31%), Gaps = 17/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G +G+++      + +G ++ +I+          L   
Sbjct: 8   LLNGLTLGSIYGLVAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLVLTSIFAGLPVA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +++     ++      +  + +A   L  S     ++            I V      
Sbjct: 68  VLLLAMLVVAMLMTSLWNWTIERVAYRPLRGSFRLAPLITAIGMSITLSNFIQVTQGP-- 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +    +    +   +    +++    L       + RTA+  A R    ++K
Sbjct: 126 -RNKPIPPMVSTVYQFGNISVSLKQIIIIVITAVLLTIFWYIVNRTALGRAQRATEQDRK 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       F + +A   +AG  +       S +   F+  +   +  +LGG+
Sbjct: 185 MAALLGVNVDQTISITFVMGAALAAVAGTMYLMYYGVASFND-GFTPGVKAFTAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        ++  +  L        +  +  F               L  V++ +   
Sbjct: 244 GSLPGAVFGGLLIGLIESLWSAYFTIAYKDVATF-------------AILAFVLIFKPTG 290

Query: 339 LLRL 342
           +L  
Sbjct: 291 ILGR 294


>gi|332716849|ref|YP_004444315.1| branched chain amino acid ABC transporter, membrane spanning
           protein [Agrobacterium sp. H13-3]
 gi|325063534|gb|ADY67224.1| branched chain amino acid ABC transporter, membrane spanning
           protein [Agrobacterium sp. H13-3]
          Length = 335

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 126/334 (37%), Gaps = 33/334 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + ++  L + +         ++  +      + +FA   ++++G  GLLS      +   
Sbjct: 28  VLILAGLAVLIAAPMFVYPIFLMKLL----CFALFACAFNLLIGYTGLLSFGHAAFFGGA 83

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY        +G++  + + +    +   G+++G  +++ +G Y A+ TL +S++F    
Sbjct: 84  AYFTAYSVKEWGVTPEIGLLIGMAGAALLGLVIGFFAIRRQGIYFAMITLALSQMFYFFC 143

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++                       ++ + R   F    +   + +YY +L    L+  +
Sbjct: 144 LQA--------------PFTHGEDGLQGVPRGHLFGLLDLNAPLNIYYTVLAAFVLALLV 189

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           I     +      ++IR+N++   SL  ++   KL AF +S+A  G+AG   A      +
Sbjct: 190 IWRFVNSPFGMILKSIRENEQRAISLGYSVQRYKLGAFVMSAALAGLAGGLKALVFQFAT 249

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
                +  +  VI + +LGG+ ++        +++ +       +F              
Sbjct: 250 LTDVAWQMSGEVILMTLLGGIGTMIGPIFGAGLVVALQNYLATSDFPV------------ 297

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
              T +  +     +L+    L+     S    +
Sbjct: 298 ---TIITGLVFMACVLVFRRGLIGEFYASRLGRK 328


>gi|254297893|ref|ZP_04965346.1| ABC transporter, permease/ATP-binding protein [Burkholderia
           pseudomallei 406e]
 gi|157807458|gb|EDO84628.1| ABC transporter, permease/ATP-binding protein [Burkholderia
           pseudomallei 406e]
          Length = 758

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 4   ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 64  GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298


>gi|254261970|ref|ZP_04953024.1| ABC transporter, permease/ATP-binding protein [Burkholderia
           pseudomallei 1710a]
 gi|254220659|gb|EET10043.1| ABC transporter, permease/ATP-binding protein [Burkholderia
           pseudomallei 1710a]
          Length = 746

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 4   ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 64  GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298


>gi|323141503|ref|ZP_08076391.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Phascolarctobacterium sp. YIT 12067]
 gi|322414019|gb|EFY04850.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Phascolarctobacterium sp. YIT 12067]
          Length = 296

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 97/303 (32%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G +++ G + L++      Y +GAY      ++ GL     I  
Sbjct: 12  LINGVSLGSIYALIALGYTMIYGIIKLINFAHGDIYMLGAYFGFFATTQLGLPFIPAIIF 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S   +   G+I+   + +   +   IA LI +      L              +   +  
Sbjct: 72  SMAGAAIAGIIIERVAYRPMRNAPRIAILITAIGVSFFLE-----------YSMILLVSP 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T  ++     +    ++       +LL    L A +   + +T    A R +  +  
Sbjct: 121 QPRTFPAVFGATVYHLGPLVANSQQLVILLSAIILMAVLTYIVNKTKAGKAMRAVSYDAD 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   I     + FA+ SA     G       + I P M      +      +LGG+
Sbjct: 181 AARLMGINIDRVISTTFALGSALAAAGGVLVGVYYNSIDPLM-GMMPGLKAFVAAVLGGI 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        IL  V  +  G     F     F               L +++L +   
Sbjct: 240 GIIPGAMIGGIILGVVEAMVSGYISSTFRDAAAFG-------------ILIIILLYKPSG 286

Query: 339 LLR 341
           LL 
Sbjct: 287 LLG 289


>gi|307316761|ref|ZP_07596203.1| urea ABC transporter, permease protein UrtC [Sinorhizobium meliloti
           AK83]
 gi|306897383|gb|EFN28127.1| urea ABC transporter, permease protein UrtC [Sinorhizobium meliloti
           AK83]
          Length = 391

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 106/351 (30%), Gaps = 35/351 (9%)

Query: 13  KILCLLAVVYPLLLFLFLG--ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
            IL  LAV+ P L  L           Y+ S+  + L Y + A  L +V G  G+LSL  
Sbjct: 19  AILLALAVIVPALNLLTAPEHPLHVPTYLVSLFGKYLTYALLALALDLVWGFCGILSLGH 78

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
              +A+G Y+  +   R   +                    LP   +  D    A L++ 
Sbjct: 79  AAFFALGGYAMGMYLMRQIGARGSYGNPLLPDFMVFLNWKELPWFWYGFDMFWFAALMVV 138

Query: 131 EIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFR 171
            +   +   +                             +  D  +     +        
Sbjct: 139 LVPGLLAFVFGWFAFRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILG 198

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F          ++        +S  +   + R+        +RD +     L   +   K
Sbjct: 199 FNIQADGTRAALFAASALALAVSLVVTSGIVRSKFGKVLVALRDAESRTRFLGYRVEHMK 258

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           L AF VS+   G+AGA +      I+P  F  + +I V+    +GG  +L        ++
Sbjct: 259 LFAFTVSAMMAGVAGALYVPQVGIINPGEFAPANSIEVVIWTAVGGRGTLIGPIVGAILV 318

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            G   +              F  +F       +     LV L     ++  
Sbjct: 319 NGGKSI--------------FTAAFPEFWLFALGGLFVLVTLFLPKGVVGT 355


>gi|294341742|emb|CAZ90167.1| putative Urea ABC transporter, permease protein UrtC [Thiomonas sp.
           3As]
          Length = 377

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/327 (13%), Positives = 93/327 (28%), Gaps = 29/327 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---- 86
            +    +Y   +  +IL Y M A  + +V G  G+LSL   + +A+G Y+  +  +    
Sbjct: 56  SSLHLSQYWVGLSGKILCYAMVALAMDLVWGYAGILSLGHGLFFALGGYAMGMYLNRAMN 115

Query: 87  --------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF---QN 135
                         W   P   + +      + L                          
Sbjct: 116 AASGNLPDFMQFMQWTHFPWYWVGTEHFAWALFLAVAAPGLLAFIFGFFAFRSRIKGVYF 175

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +I            +  +  +     +        FP       + ++        L  
Sbjct: 176 SIITQALTYAAMLLFFRNETGFGGNNGLTDFKVLLGFPMGTAGMTVSLFVASSLTLVLMF 235

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
               WL R+        +RD +          ++ KL  + +S+   G+AGA +A     
Sbjct: 236 LFSRWLVRSKFGRVLTAVRDAESRVMFCGYNPLWFKLGVWTISAMMCGIAGALYAPQVGI 295

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           I+P     S +I +     +GG  +L        ++                       +
Sbjct: 296 INPSEMSTSNSIEIAIWTAIGGRGTLIGPIVGAVLVNVAKSWLT--------------VA 341

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                  ++     +V L   + ++ L
Sbjct: 342 MPQVWLYVLGGLFIVVTLYAPYGIVGL 368


>gi|317048653|ref|YP_004116301.1| inner-membrane translocator [Pantoea sp. At-9b]
 gi|316950270|gb|ADU69745.1| inner-membrane translocator [Pantoea sp. At-9b]
          Length = 304

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 87/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I             P+
Sbjct: 9   LVNGLTLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIGLGLLSFFGIHSFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +    +++                   + +   I      +               
Sbjct: 69  LIFGTLIFTIVVTAVYGWTIERIAYRPLRNSTRLAPLISAIGMSLILQNYVQLSQGPNQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+ S +         V       ++L+      A +   ++ T +    R ++ +++
Sbjct: 129 GIPTLMSGVLRMEIDGGVVQITWTKVFILIAALAGMALLTWIIQYTRLGRICRAVQQDRR 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A  G+AG     +          F   I   +  +LGG+
Sbjct: 189 MAAILGINTDRVISLVFMIGAAMAGLAGVLVTMNYGTFDFY-IGFVIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        +L        G+    +  +  F               L ++++ R   
Sbjct: 248 GSLPGAMLGGLLLGVAEAQFAGLVNSDYKDVFSF-------------ALLVVILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|87301713|ref|ZP_01084553.1| putative membrane protein of urea ABC transport system
           [Synechococcus sp. WH 5701]
 gi|87283930|gb|EAQ75884.1| putative membrane protein of urea ABC transport system
           [Synechococcus sp. WH 5701]
          Length = 368

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/338 (12%), Positives = 99/338 (29%), Gaps = 32/338 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L + LF+       +  ++  +     + A  + ++ G  GLLSL   I +++G Y+ 
Sbjct: 11  ILLAVALFILPAGLDDFRLNLFGRYFALAITALAIDLIWGYTGLLSLGQGIFFSLGGYAV 70

Query: 82  VILGSRYGLSIW-------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       S+                           P       ++  A +     + 
Sbjct: 71  AMYLMLNTKSLAGGNGIPKFFENYGVAELPFFWKPFWSPVFTLIAIWVIPAVVAGVVGWL 130

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTV-----------RSLIRFFRFPSSFVIYEIFM 183
               + K +             +                  S  + F         +++ 
Sbjct: 131 IFRNRIKGVYFSIITQAALMVFFHFFNGQQKLFDGTNGLKTSTSQLFGQLVGSPDMQVWF 190

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           Y + + +  ++  I  +       +A   IRD++  F       +  K   F V+ A  G
Sbjct: 191 YRLTVILLPIAFLICRYFTSGRFGDALIAIRDDETRFRFAGFNPVPFKTIVFLVAGALCG 250

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           ++GA +      +SP     S +I ++  V +GG  +L        ++  +  L      
Sbjct: 251 ISGALYTVQSGIVSPQYMSISFSIEMVIWVAVGGRGTLVGPIIGATLVNYLRSLVSE--- 307

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                      +       +       V+++    +  
Sbjct: 308 -----------ALPEAWLFVQGALFIFVVVLMPDGIYG 334


>gi|251767463|ref|ZP_02267366.2| ABC transporter, permease/ATP-binding protein [Burkholderia mallei
           PRL-20]
 gi|243062677|gb|EES44863.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei
           PRL-20]
          Length = 752

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 4   ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 64  GAFVAAHSFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298


>gi|121599860|ref|YP_992770.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei
           SAVP1]
 gi|121228670|gb|ABM51188.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei
           SAVP1]
          Length = 755

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 4   ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 64  GAFVAAHSFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298


>gi|227432535|ref|ZP_03914519.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
 gi|227351713|gb|EEJ41955.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
          Length = 266

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 90/284 (31%), Gaps = 25/284 (8%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           +V G + L++      Y +GAY          L+ ++ + ++  +S   G+++   + + 
Sbjct: 1   MVYGIIKLINFAHGDIYMLGAYFGYFFIKVLHLNFFIALILAMAVSAIIGVVIEYIAYRP 60

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 IA LI +     +L        G         +  +                 +
Sbjct: 61  LRHSPRIAVLISALGISFLLENGMTYLYGSDQRSFPKAIKTVQYHFYG-----------I 109

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                   + +    L   +   ++ T +  A R +  +  A   +   I       FA+
Sbjct: 110 QVSNIQLIIAVTSIVLMLLLTYIVKNTKMGRAMRAVSADPDAASLMGININHTISFTFAI 169

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            SA     G       + I P M   +  +      +LGG+  +   A    ++  +  +
Sbjct: 170 GSALAAAGGVLIGLYYNSIDPLM-GMTPGLKAFFAAVLGGIGIIPGAAVGGWLIGILETM 228

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                            +F+     ++   L +++L++   +L 
Sbjct: 229 VQ-------------ATAFSDYKDAIVYAMLIVILLIKPTGILG 259


>gi|254197595|ref|ZP_04904017.1| ABC transporter, permease/ATP-binding protein [Burkholderia
           pseudomallei S13]
 gi|169654336|gb|EDS87029.1| ABC transporter, permease/ATP-binding protein [Burkholderia
           pseudomallei S13]
          Length = 780

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 16  ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 75

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 76  GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 135

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 136 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 183

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 184 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 243

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 244 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 292

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 293 ----LLYLGLLFVAVVLAAPGG 310


>gi|239623158|ref|ZP_04666189.1| ABC branched chain amino acid family transporter [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239522525|gb|EEQ62391.1| ABC branched chain amino acid family transporter [Clostridiales
           bacterium 1_7_47FAA]
          Length = 297

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 114/305 (37%), Gaps = 21/305 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +   Q  IY + A G S++VG +G+++        IGA+S   +   +G ++ L I  
Sbjct: 10  LVNGLCQGAIYALMAIGYSVIVGVVGMVTFTYGEIMMIGAFSSYYIFLLFGNNLPLAILA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   S   G+++     +   +     +L+ +     ++     I  G     V D    
Sbjct: 70  AFTGSFLIGIVVYKLCYEKFFNAPRHISLLCTIGISMLIKNLAQIVFGPETKPVLD---- 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V +        S  +  ++    V++ +  L++++ L+  +T    A R +  N+ 
Sbjct: 126 ---IVENKTFTLMLGSVRLDIKLLQIVVIVLVVVLASALTLFFNKTKWGIALRAVSQNKD 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A + +   +    +    + S F G+AG         +S  M     ++   +  +LGG+
Sbjct: 183 AAYLVGINVKRTAMIGNCIGSGFGGIAGILLCIYYYSVSATMGGI-YSMKAFAASVLGGL 241

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A     +  +  L   ++   F  +  F               L LV+L+R   
Sbjct: 242 VDIRFSALGGLCIGVIENLGIAVSAATFRDVFAFGF-------------LILVLLIRPQG 288

Query: 339 LLRLR 343
            +  +
Sbjct: 289 FVSKK 293


>gi|237817539|ref|ZP_04596529.1| branched-chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella abortus str. 2308 A]
 gi|237787294|gb|EEP61512.1| branched-chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella abortus str. 2308 A]
          Length = 583

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91
               KY   +   + I  +    L +V G  G++SL  +    +GA+ +  +        
Sbjct: 37  LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 96

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + + + +  + +   G+ +GLP+L+ RG  LAI TL  +  F  +L              
Sbjct: 97  LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 146

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                       +   +  +L    + A ++ ++  + +  +W 
Sbjct: 147 ----------FPGQTSFTQVARPDLFANDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 196

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R +++A  +   +I  AKLSAFA+S+   G++G   A     +  + F   +++ + +
Sbjct: 197 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 256

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  + G            +++   EL   +N       + F       
Sbjct: 257 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 304


>gi|239817265|ref|YP_002946175.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239803842|gb|ACS20909.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 337

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 118/325 (36%), Gaps = 26/325 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            +L+ + L A         +   +    +FA  LS+V+G  G+ +L     Y  GAY   
Sbjct: 26  LVLMLVGLLAFVLFPQDLGLLTNMATMSIFALSLSLVLGQAGIATLGQAALYGSGAYVAG 85

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
                      + + +  +  G   ++ G   L+     L + T+ ++++   +    + 
Sbjct: 86  WTALYLTADPIVGLLLGGLGGGVIALLSGAVMLRSTKLTLVMLTIAVAQLLLELANWARW 145

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+   +    LG    + + +              Y+  LG   L   ++  L 
Sbjct: 146 LTGGDDGLAGFNIGPLLGIWEFNFLSYTG------------YFYALGALVLVYFLLRNLV 193

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            +      R IR +     +L   +    L+ + V     G+AGA  A +    +  M  
Sbjct: 194 ESPFGLTARAIRQDPGRVQALGGRVYLHLLAVYTVGGIVAGLAGALTAQTSKVANLFMLD 253

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F+ +  V+ +++LGG   LS     T   + +  +   +N Y++                
Sbjct: 254 FTTSAGVVVMIVLGGTRRLSGAVLGTVAYMTIHHIASTLNPYHW--------------LF 299

Query: 323 LMVIALFLVILMRSHSLLRLRTPSN 347
            +   L +V+++    L+ L   + 
Sbjct: 300 FIGSMLIVVLIVLPEGLIGLVDRTV 324


>gi|148557938|ref|YP_001258026.1| branched chain amino acid ABC transporter permease/ATP-binding
           protein [Brucella ovis ATCC 25840]
 gi|148369223|gb|ABQ62095.1| branched chain amino acid ABC transporter, permease/ATP-binding
           protein [Brucella ovis ATCC 25840]
          Length = 570

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91
               KY   +   + I  +    L +V G  G++SL  +    +GA+ +  +        
Sbjct: 24  LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + + + +  + +   G+ +GLP+L+ RG  LAI TL  +  F  +L              
Sbjct: 84  LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 133

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                       +   +  +L    + A ++ ++  + +  +W 
Sbjct: 134 ----------FPGQTSFTQVARPDLFASDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R +++A  +   +I  AKLSAFA+S+   G++G   A     +  + F   +++ + +
Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  + G            +++   EL   +N       + F       
Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291


>gi|115523669|ref|YP_780580.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115517616|gb|ABJ05600.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 305

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 104/312 (33%), Gaps = 28/312 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGL 90
           + +  +   IY + A G ++V G +G+++      + IG +  +I          +   +
Sbjct: 8   LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFVALISFLILVSFGLTFVPV 67

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + +++ VS  I+   G  +   + +       +A ++ +     +L+ +  +  G    
Sbjct: 68  ILLIVLLVSMAITALYGWTVERIAYRPLRHSFRLAPMLSAIGMSFVLMNYSQVAQGARVK 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            V   +    T   S   F    S+  I  +    VLL      A     + RT +    
Sbjct: 128 PVPPIITGGYTLHESADGFNVQLSNVQIVVVITTVVLL------AIFTWLVSRTRLGRDM 181

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    +Q     L   +       F + +A   +AG  +      +   M  F   I   
Sbjct: 182 RACEQDQTMAALLGVDVDRTISMTFVIGAALASVAGMMYLLYYGLVDFFM-GFVAGIKAF 240

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ SL        ++  +  L        +  +  F               L +
Sbjct: 241 TAAVLGGIGSLPGAMLGGLLIGLIETLWSAYFSVEYKDVAAFS-------------ILVV 287

Query: 331 VILMRSHSLLRL 342
           V++     LL  
Sbjct: 288 VLIFLPTGLLGR 299


>gi|229069506|ref|ZP_04202795.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus F65185]
 gi|228713645|gb|EEL65531.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus F65185]
          Length = 298

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 55/304 (18%), Positives = 119/304 (39%), Gaps = 31/304 (10%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLIPV 98
           M  QI I+ +FA    +++G  G++S    + + IGAY   +          +  + I  
Sbjct: 1   MFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFLIGIVA 60

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++S     I+GL SL+ +  + A+ TL +S++F  +  KW+ +T+G  G        F
Sbjct: 61  AIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPEIF 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                    YYV          ++    +++I    + I  N++
Sbjct: 121 RDRF-------------------TFYYVSFVCLCFIFILLRLFTKSSIGKVLKAISQNEQ 161

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   ++  K+ A  V+     ++G  F  +   ++  +F     +  + + ++GG+
Sbjct: 162 RVEALGYKVLPYKIIASVVAGIVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGV 221

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L            +       +  Y+ S L  +     R T ++ +   +V+L+    
Sbjct: 222 GTLI---------GAIAGAGIIESLKYYLSELATEYPIFERWTIILGLLYIIVLLVFPKG 272

Query: 339 LLRL 342
           L+  
Sbjct: 273 LVGT 276


>gi|86747270|ref|YP_483766.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86570298|gb|ABD04855.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 311

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 64/326 (19%), Positives = 133/326 (40%), Gaps = 32/326 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  L+  +         Y   +G    +Y + A   ++V G  G  S      +  GA
Sbjct: 6   IALLVLIACVAALPLFGGAYALRLGTIACMYAVLALSWNVVGGFAGYPSFATAAFFGFGA 65

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y   +L  +          V+ +++    + +G   L+ RG Y AIA+L ++E+ + ++ 
Sbjct: 66  YCGGVLMGKGFPLW-AAAAVAGLLALVSAVALGAVLLRLRGHYFAIASLSLAEVLREVVN 124

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +T G  G+ +                     +  +    F +Y + G+  ++A ++
Sbjct: 125 NATDLTGGGMGLNIPLAS----------------GAGVMAEATFFFYAMWGVMLITALMV 168

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + +  + +  A   IR N+ A   +      AK  AF +S+ F+ +AG  +AA    I P
Sbjct: 169 IVVANSKLGFALNCIRQNETASSMVGLNTTLAKSIAFGLSACFVSVAGGIYAAWVHYIDP 228

Query: 259 -DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            D+F    ++  I + ++GG+ S   +A    + +G+ E+                 ++ 
Sbjct: 229 SDVFDILYSVKPIVMALMGGLGSPLGVACGAFMYLGLEEVV--------------WRNYT 274

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLR 343
             HT ++ + + +++L   H L  LR
Sbjct: 275 HIHTGVLGVLIVMLLLFLPHGLSSLR 300


>gi|126454727|ref|YP_001065943.1| ABC-transporter [Burkholderia pseudomallei 1106a]
 gi|242316817|ref|ZP_04815833.1| ABC transporter, permease/ATP-binding protein [Burkholderia
           pseudomallei 1106b]
 gi|126228369|gb|ABN91909.1| ABC transporter, permease/ATP-binding protein [Burkholderia
           pseudomallei 1106a]
 gi|242140056|gb|EES26458.1| ABC transporter, permease/ATP-binding protein [Burkholderia
           pseudomallei 1106b]
          Length = 746

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 4   ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 64  GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298


>gi|328545453|ref|YP_004305562.1| branched-chain amino acid ABC transporter (permease protein);
           livH-like protein [polymorphum gilvum SL003B-26A1]
 gi|326415194|gb|ADZ72257.1| Putative Branched-chain amino acid ABC transporter (Permease
           protein); livH-like protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 290

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 94/307 (30%), Gaps = 26/307 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             + +      +Y + A GL+++ G L +++        IG Y+   L +R+G+  ++ +
Sbjct: 9   PSLLNGLTTGALYALVALGLTLIYGVLHIINFAHGALLMIGLYAVYFLNARFGIDPYVAL 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +      A G  +    +   G       L+++     ++                   
Sbjct: 69  LIVPPALFALGYALQRGIITRAGHGRDENILLVTLGLSIVIENLALFAFRSD-------- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                TV +   F           +       G    +A +   + +T +  A R +   
Sbjct: 121 ---TRTVDTPYSFEIVEVLGAFLPLPKVVAFFGALVTAALLWGLMAKTDLGRAIRALAKE 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +K    +          +F +    +G+A      S          F    I  +IV+LG
Sbjct: 178 RKGAKLVGINTEHVYAMSFGLGVGCLGVAACLLLPSYYVTPQVGHGFVL--IAFTIVVLG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM S         I+  V  L           +              + +   LV++ R 
Sbjct: 236 GMGSFVGALVGGLIIGVVEALGGLFLGESLGQIG-------------IFLIFILVLIFRP 282

Query: 337 HSLLRLR 343
             LL  +
Sbjct: 283 TGLLGHK 289


>gi|254178218|ref|ZP_04884873.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei
           ATCC 10399]
 gi|160699257|gb|EDP89227.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei
           ATCC 10399]
          Length = 752

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 4   ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 64  GAFVAAHSFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298


>gi|126442169|ref|YP_001058691.1| ABC transporter, permease/ATP-binding protein [Burkholderia
           pseudomallei 668]
 gi|126221662|gb|ABN85168.1| ABC transporter, permease/ATP-binding protein [Burkholderia
           pseudomallei 668]
          Length = 752

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 4   ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 64  GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298


>gi|67642658|ref|ZP_00441411.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei
           GB8 horse 4]
 gi|254199573|ref|ZP_04905939.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei
           FMH]
 gi|254205892|ref|ZP_04912244.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei
           JHU]
 gi|147749169|gb|EDK56243.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei
           FMH]
 gi|147753335|gb|EDK60400.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei
           JHU]
 gi|238523845|gb|EEP87281.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei
           GB8 horse 4]
          Length = 749

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 4   ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 64  GAFVAAHSFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298


>gi|124386440|ref|YP_001026440.1| putative branched-chain amino acid ABC transporter, permease/ATP
           binding protein [Burkholderia mallei NCTC 10229]
 gi|254358710|ref|ZP_04974983.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei
           2002721280]
 gi|124294460|gb|ABN03729.1| putative branched-chain amino acid ABC transporter, permease/ATP
           binding protein [Burkholderia mallei NCTC 10229]
 gi|148027837|gb|EDK85858.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei
           2002721280]
          Length = 749

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 4   ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 64  GAFVAAHSFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298


>gi|319780971|ref|YP_004140447.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166859|gb|ADV10397.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 300

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 107/313 (34%), Gaps = 35/313 (11%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---------LGSRYG 89
           + +      IY + A G ++V G +G+++      + +GA++ +I               
Sbjct: 8   LINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMVGAFTALIVFLALGALFYSVPVV 67

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L++ +++ V+ +++      +   + +       +A LI +      L  +  +T G   
Sbjct: 68  LALLIMMIVAMLLTSLYNWTIEKVAYRPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             +   +  +            +  + +   +    +++    L A     + +T++  A
Sbjct: 128 KPIPPMVSQV------------YNINGISVSLKQIIIVVVTALLLALFWYLVNKTSLGRA 175

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +A   +AG  F      I+     F+  +  
Sbjct: 176 QRACEQDRKMAALLGIDVDRTISITFIMGAALAAVAGTLFLMYYGVIAF-SDGFTPGVKA 234

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +  +        +  +  F               L 
Sbjct: 235 FTAAVLGGIGSLPGAVVGGLMIGFIESMWSAYFSIDYKDVAAFS-------------ILA 281

Query: 330 LVILMRSHSLLRL 342
           +V++     +L  
Sbjct: 282 IVLIFLPSGILGR 294


>gi|167587946|ref|ZP_02380334.1| inner-membrane translocator [Burkholderia ubonensis Bu]
          Length = 325

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 57/324 (17%), Positives = 132/324 (40%), Gaps = 16/324 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+Y +LL   L A  +  Y   +  ++L + +FA   ++++G  GLLS    +  A   Y
Sbjct: 6   VLYGVLLAALLVAPFAGAYPVFVM-KVLAFALFAAAFNLLIGYTGLLSFGHAMFLATSGY 64

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                    G S  L +      +   G+++GL +++ +G Y A+ TL  +++   I ++
Sbjct: 65  LTGYALQTLGFSSELGVLAGTAAATLLGLVVGLFAIRRQGIYFAMITLAFAQMIYFIYLQ 124

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                                  ++ + R   F    +  ++ +YYV+L +   + + I+
Sbjct: 125 A--------------PFTHGEDGLQGVPRGRLFGVLDLSSDLVLYYVVLAIIVAACAFIV 170

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +        I++N+    SL       KL AF +S+   G+AG+         +  
Sbjct: 171 RIVHSPFGQVLVAIKENEARAVSLGYDTDRFKLLAFVLSAGLAGLAGSLKVLVLGFETLS 230

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318
              ++ + +V+ + ++GGM +L       A+++ + +    +  +  + + + +  S   
Sbjct: 231 DAYWTMSGLVVLMTLVGGMGTLFGPLLGAALIVSLEDRLGDIGEWLASLTGIGWFHSLGE 290

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
             T +  +     +L     ++  
Sbjct: 291 SATIVTGLIFIACVLAFRRGIVGE 314


>gi|153011053|ref|YP_001372267.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
 gi|151562941|gb|ABS16438.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
          Length = 328

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 58/343 (16%), Positives = 126/343 (36%), Gaps = 28/343 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+  +  L++Y      LA V  ++     G       + ++  +I+   +    L +V 
Sbjct: 1   MTDMTQALSQYRHSYAGLAGVAAIIAASICGWFLFPDNL-ALLTRIIAIALLVLSLDLVT 59

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           G  G+ +L     +  GAY   I  + +      L+  +  +     G++ G   L+  G
Sbjct: 60  GYCGIATLGHAALFGAGAYGAGIAAAHFGITDPILMTLIGLVAGAITGLVSGAVILRAHG 119

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
               + ++ +  +F     K    T G  G+         G               F +Y
Sbjct: 120 LAQLVLSIAVVHLFHEAANKASSWTGGSDGLSGISPDPIFGM------------FEFDLY 167

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              +Y   + +  +S   + ++ R+      R ++++     ++  ++  A+L  + +S 
Sbjct: 168 GHTVYVYAVFLLLVSFIFLRYVVRSPFGMLCRGVKEDPIRIHAMGASVQSAQLRMYVISG 227

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  G+ GA  A S   +  D   F+ +   + +++LGG  SL      T + +   +L  
Sbjct: 228 AVAGIGGALNAISTQVVGLDSLSFTMSAEALVMLVLGGTGSLFGGLIGTVVFMWFEDLVS 287

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             N +++               T++ + L  V+L     L   
Sbjct: 288 AANPFHW--------------LTMVGVLLIAVVLFAPRGLYGT 316


>gi|124026622|ref|YP_001015737.1| putative membrane protein of urea ABC transport system
           [Prochlorococcus marinus str. NATL1A]
 gi|123961690|gb|ABM76473.1| putative membrane protein of urea ABC transport system
           [Prochlorococcus marinus str. NATL1A]
          Length = 375

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 53/358 (14%), Positives = 110/358 (30%), Gaps = 36/358 (10%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           MSIFS + +     + +L +   +     L   +      ++  + L   + A G+ ++ 
Sbjct: 1   MSIFSTKKSWIQLTIWVLIIALIIAAPSLLPVFR-----LNLLGRYLSLAIVALGVDLIW 55

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGS-RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           G  G+LSL   I +A+G Y   +             IP    + G   +       K   
Sbjct: 56  GFTGMLSLGQGIFFALGGYCAAMFLQLNSSGQFPNGIPEFFGLYGVEKLPFFWEPFKSSI 115

Query: 120 DYLAIATLI----------------MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
             L    L+                +  ++ +IL +   +            +       
Sbjct: 116 FTLISIWLLPAIIAGLLGYLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLK 175

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
             + + F       I + + ++V   +  L+     W+ R    N    IRD++      
Sbjct: 176 TDVTQLFGQMVGSEIMQRWFFWVSAILVILAWFFARWIVRDRFGNILIGIRDDEARVRFT 235

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
               +  K   F+++    G++GA +      +SP       +I ++  V +GG  +L  
Sbjct: 236 GYNPVIFKTIIFSIAGGLAGISGALYTVQSGIVSPQFMTVPFSIEMVVWVAVGGRGTLLG 295

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  +     L                 +       +      LV+      +L 
Sbjct: 296 AILGAVFINYAKSLVSE--------------ALPASWMFIQGGLFILVVTALPEGVLG 339


>gi|257092807|ref|YP_003166448.1| urea ABC transporter permease UrtB [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045331|gb|ACV34519.1| urea ABC transporter, permease protein UrtB [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 532

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/291 (11%), Positives = 81/291 (27%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       +GAYS   + S +   +   +    + +   G +        
Sbjct: 258 ITYGVMGVINMAHGELLMVGAYSAWAMQSVFRAYLPGALDWYLLAAIPVGFLAAALVGVL 317

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 I   +     + +L  W                  +     + +         +
Sbjct: 318 MER--LIIRHLYGRPLETLLATWGISLFLMQVARTVFGAQNVEVANPAWMAGGIELLPNL 375

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++     +  ++   L  + +    R +  N+     +          AF +
Sbjct: 376 MLPWNRIIIVAFSIAVLVAMWAILNLSRLGMFVRAVTQNRPMAGCVGVPTGRIDTLAFGL 435

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            +   G+ G   A S+             +    +V+LGG+  L+    A   L    + 
Sbjct: 436 GAGIAGLGGV--ALSQIANVGPDMGQGYIVDSFMVVVLGGVGQLAGAVWAALGLGVFTKF 493

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
             G                      ++++ + + I  R   L  L+     
Sbjct: 494 LEGWTGAVVAK-------------IVVLVFIIIFIQKRPQGLFALKGRFVE 531


>gi|149375699|ref|ZP_01893468.1| branched-chain amino acid ABC transporter,permease protein
           [Marinobacter algicola DG893]
 gi|149360101|gb|EDM48556.1| branched-chain amino acid ABC transporter,permease protein
           [Marinobacter algicola DG893]
          Length = 399

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/336 (14%), Positives = 89/336 (26%), Gaps = 36/336 (10%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL---- 84
            +       +  +M  + L Y   A GL +  G  G+LSL   + + +G Y   +     
Sbjct: 27  VILPLVLDPFRLNMVGKYLTYAFVAIGLVMCWGKAGILSLGQGVFFGLGGYCMAMFLKLE 86

Query: 85  --------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                             +                  S            L     F   
Sbjct: 87  ASTPEATAIQSTPGIPDFMDWNQLTELPWFWEPFHSFSFTLIAVIGVPVLLAFVIGFAMF 146

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYV 186
             +   +        +A  L  L    +                 +          +Y+V
Sbjct: 147 TRRVGGVYFAIITQAIAAILTILIIGQQGYTGGVNGITDLQTLKGWDIRTDEARTALYFV 206

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            +GM FL   +   ++   +      +   +         +   K+  F +++AF G+ G
Sbjct: 207 CVGMLFLCLFVARLVQNRKLGRILVAMNAQEMRVRFSGYDVAAFKIFVFCLAAAFAGIGG 266

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A F      +SP       +I ++    LGG  S+        ++               
Sbjct: 267 AMFTLIVGFMSPSFIGIVASIEMVIFCALGGRLSILGAVYGALLV--------------N 312

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +   F  SF       M      V+L   + L  L
Sbjct: 313 AAKSGFSESFPELWPFAMGALFIGVVLAFPNGLAGL 348


>gi|167035270|ref|YP_001670501.1| inner-membrane translocator [Pseudomonas putida GB-1]
 gi|166861758|gb|ABZ00166.1| inner-membrane translocator [Pseudomonas putida GB-1]
          Length = 307

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 87/290 (30%), Gaps = 2/290 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I  +   +     +P+
Sbjct: 11  LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAMMGIHSLPI 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
              ++    + +                   + +   I  I           +    +  
Sbjct: 71  LMTVAFVATIFVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNTVLLSQDSKDK 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   +     F    +  V+       V +        + L++ R+ +  A R   ++ 
Sbjct: 131 SIPNLIPGSFSFGPGGAEEVLISYMQVLVFVVTLVAMTLLTLFISRSRLGRACRACAEDI 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +A    +     I+P+   F   +   +  +LGG
Sbjct: 191 KMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNA-GFLVGLKAFTAAVLGG 249

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           + S+        +L         +    +  ++ F     +       I 
Sbjct: 250 IGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299


>gi|15966238|ref|NP_386591.1| high-affinity branched-chain amino acid transport permease ABC
           transporter protein [Sinorhizobium meliloti 1021]
 gi|307308589|ref|ZP_07588291.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
 gi|307317367|ref|ZP_07596807.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|15075508|emb|CAC47064.1| Probable high-affinity branched-chain amino acid transport permease
           ABC transporter [Sinorhizobium meliloti 1021]
 gi|306896956|gb|EFN27702.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|306900989|gb|EFN31598.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
          Length = 300

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 97/304 (31%), Gaps = 17/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY M A G ++V G +G+++      + +G ++ +I+       I  +  V
Sbjct: 8   LVNGLTLGSIYGMIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLLLTTFIAGVPVV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A++      ++      +  + +A   L  S     ++            I V      
Sbjct: 68  LALLIMMVVGMLTAALWNWTIERVAYRPLRGSFRLAPLITAIGMSIVLSNFIQVTQGPRN 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                     +  F  S  + +I +  +   +          + RT +  A R    ++K
Sbjct: 128 KPIPPLVSSVYDLFGISVSLKQIIIVVITAILLS---VFWYIVNRTPLGRAQRATEQDRK 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       F + +A   +AG  +      +      F+  +   +  +LGG+
Sbjct: 185 MAALLGVDVDRTISVTFIMGAALAAVAGTMYLMYYGVVVFTD-GFAPGVKAFTAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        ++  +  L        +  +  F               L +V++ +   
Sbjct: 244 GSLPGAVLGGLLIGLIESLWSAYFTIDYKDVATFS-------------ILAIVLIFKPSG 290

Query: 339 LLRL 342
           +L  
Sbjct: 291 ILGR 294


>gi|13473393|ref|NP_104960.1| permease of ABC branched chain amino acid transporter
           [Mesorhizobium loti MAFF303099]
 gi|14024142|dbj|BAB50746.1| permease of ABC branched chain amino acid transporter
           [Mesorhizobium loti MAFF303099]
          Length = 300

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 104/313 (33%), Gaps = 35/313 (11%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---------LGSRYG 89
           + +      IY + A G ++V G +G+++      + +GA++ +I               
Sbjct: 8   LINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMVGAFTALIVFLILGALFYSVPVV 67

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +++ +++ V+ +++      +   + +       +A LI +      L  +  +T G   
Sbjct: 68  IALLVMMIVAMLLTSLYNWTIEKVAYRPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             +   +  +            +    V   +    +++    L       + RT++  A
Sbjct: 128 KPIPPMVSQV------------YNIDGVSVSLKQIIIVIVTALLLVVFWYLVNRTSLGRA 175

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + ++   +AG  F      ++     F   +  
Sbjct: 176 QRACEQDRKMAALLGVDVDRTISITFIMGASLAAVAGTLFLMYYGVVAF-SDGFVPGVKA 234

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +  +        +  +  F               L 
Sbjct: 235 FTAAVLGGIGSLPGAVLGGLLIGFIESMWSAYFSIDYKDVAAFS-------------ILA 281

Query: 330 LVILMRSHSLLRL 342
           +V++     +L  
Sbjct: 282 IVLIFLPSGILGR 294


>gi|168335481|ref|ZP_02693567.1| inner-membrane translocator [Epulopiscium sp. 'N.t. morphotype B']
          Length = 300

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 105/303 (34%), Gaps = 20/303 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A G ++V G + L++        +GAY   ++ + + ++I + + V
Sbjct: 11  IINGLHVGSIYALIALGYTMVYGIVKLINFAHGDIMMVGAYVAFVMMTAFNMNIVVALIV 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     GM +   + K       +  LI +      L     +  G            
Sbjct: 71  AVIFCSLLGMTIEKVAYKPLRKAPRMWALITAIGVSFFLESAVMVLFGANPKPFPAPPSK 130

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L                 + +   M   L     L  ++  +++ T +  A R   ++  
Sbjct: 131 L------------ITIGNLQFSQLMLISLALSVVLMIALERFIKTTRLGKAMRASSEDAD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +  ++     +AF + SA   + G  FA +  +I   +      +      +LGG+
Sbjct: 179 AAALMGISVNKTISTAFVIGSALAAIGGVLFAIAYPQI-KPLMGMMPGLKAFIAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        +L  +  L  G    ++     +  +       ++   L LV+L++   
Sbjct: 238 GIIPGAMLGGFLLGLIESLTKGFLSAFWPGATLWADA-------ILFSILILVLLIKPSG 290

Query: 339 LLR 341
           +L 
Sbjct: 291 ILG 293


>gi|159027463|emb|CAO89428.1| natC [Microcystis aeruginosa PCC 7806]
          Length = 371

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 61/372 (16%), Positives = 116/372 (31%), Gaps = 61/372 (16%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S+ I   IY +FA GL++  G  GL++   V    +GAY+ V+L  +    I+  I
Sbjct: 3   DYLVSLTIWAGIYAIFALGLNLQWGFTGLINFGHVAFATLGAYATVLLTLQGVPMIFAAI 62

Query: 97  PVS-----------------------------------------AMISGACGMIMGLPSL 115
             +                                          +  G+ G+      L
Sbjct: 63  VGALLGALLGLAIGFSTLRLRADYLAIVTIGVSELIRLLVLNEDWLTKGSFGLQRYPLPL 122

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +     +I       I   W+   N +     A ++               +   
Sbjct: 123 DINPSFPVKLLIIALFTLLAIFALWQLGRNLQRQWREAGQISGKSYQPTQKRALIFWGLL 182

Query: 176 FVIYEIFMYYVLLGMCF-----------------LSASIILWLRRTAISNAWRTIRDNQK 218
             I  +F+Y   +                     L  + +  L R+      + IR++++
Sbjct: 183 GAIILLFLYINGVIALNDYNYKAGLMVVVLVLLALVYTGLELLLRSPWGRILKAIREDEE 242

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   + + KL +  +  A  G+AGAF A     I P  F+         I+ILGG 
Sbjct: 243 IPRALGKNVFWYKLQSLMLGGAIAGLAGAFLAWQLTTIYPTNFEPLLTFNAWIIIILGGS 302

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +       I      L   +        +  D         ++ + L ++++ R   
Sbjct: 303 GSNAGTLLGAVIFWAYDSLTRFILP---QLDIFNDSQLGALRIMIIGLLLMVLMIWRPQG 359

Query: 339 LLRLRTPSNFLE 350
           +L  +      +
Sbjct: 360 ILGKKEELTLGK 371


>gi|307301512|ref|ZP_07581272.1| urea ABC transporter, permease protein UrtC [Sinorhizobium meliloti
           BL225C]
 gi|306903569|gb|EFN34157.1| urea ABC transporter, permease protein UrtC [Sinorhizobium meliloti
           BL225C]
          Length = 391

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 106/351 (30%), Gaps = 35/351 (9%)

Query: 13  KILCLLAVVYPLLLFLFLG--ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
            IL  LAV+ P L  L           Y+ S+  + L Y + A  L +V G  G+LSL  
Sbjct: 19  AILLALAVIVPALNLLTAPEHPLHVPTYLVSLFGKYLTYALLALALDLVWGFCGILSLGH 78

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
              +A+G Y+  +   R   +                    LP   +  D    A L++ 
Sbjct: 79  AAFFALGGYAMGMYLMRQIGARGSYGNPLLPDFMVFLNWKELPWFWYGFDMFWFAALMVV 138

Query: 131 EIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFR 171
            +   +   +                             +  D  +     +        
Sbjct: 139 LVPGLLAFVFGWFAFRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILG 198

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F          ++        +S  +   + R+        +RD +     L   +   K
Sbjct: 199 FNIQADGTRAALFAASALALAVSLVVTSGIVRSKFGKVLVALRDAESRTRFLGYRVEHMK 258

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           L AF VS+   G+AGA +      I+P  F  + +I V+    +GG  +L        ++
Sbjct: 259 LFAFTVSATMAGVAGALYVPQVGIINPGEFAPANSIEVVIWTAVGGRGTLIGPIVGAILV 318

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            G   +              F  +F       +     LV L     ++  
Sbjct: 319 NGGKSI--------------FTAAFPEFWLFALGGLFVLVTLFLPKGVVGT 355


>gi|302871814|ref|YP_003840450.1| inner-membrane translocator [Caldicellulosiruptor obsidiansis OB47]
 gi|302574673|gb|ADL42464.1| inner-membrane translocator [Caldicellulosiruptor obsidiansis OB47]
          Length = 294

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 91/289 (31%), Gaps = 10/289 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + + G ++V G + L++      + +GAY   +  +   L +   + +
Sbjct: 8   LINGITLGSIYALISLGYTMVYGIIKLINFAHGDIFMVGAYIAFLSVAYLKLGLIPSLLI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +     G+++   + K   +   IA LI +     +L     I  G         +  
Sbjct: 68  SMIFCSVLGILIEKFAYKPLRNSPRIAALITAIGVSLLLENLMQIIMGADSRVFPRLVTE 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +            +++    +  ++L             ++T I  A R +  +  
Sbjct: 128 KNYHLFQGRIVINNKQIYLLIITILLMIILNFVV---------KKTKIGKAMRAVSQDMD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA    AG       + I+P M      +      + GG+
Sbjct: 179 AARLMGINVDTTISYTFAIGSALAAAAGVLVGLYYNTINPLM-GVLPGLKAFIAAVFGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +         L  +  L  G     +   + F     +       + 
Sbjct: 238 GIIPGAMLGGFSLGIIETLVSGYGSSMYKDAVAFALLILILIIKPSGLL 286


>gi|149913644|ref|ZP_01902177.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter sp. AzwK-3b]
 gi|149812764|gb|EDM72593.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter sp. AzwK-3b]
          Length = 327

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 57/311 (18%), Positives = 111/311 (35%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A++  LL          + +  ++  ++ I  +   GL+I +G  GL+SL     + IG 
Sbjct: 10  ALLLGLLAVPLWAWVADEPFTITLATRVAILALAGVGLNIALGLGGLVSLGHAAFFGIGG 69

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  IL S       L+     +       ++ L ++        +   +         I
Sbjct: 70  YAMGILASHAQSFSPLMDSPLLIEGTKSMPVIWLVAILTSALAALVIGALSLRTSGVYFI 129

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                       +      + G    S+     FP    +  I  + +      L+    
Sbjct: 130 MITLAFGQMFYFFAISWPAYGGEDGLSIYVRNDFPGLNTLDPIQFFGICFAALALALWFN 189

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+    A    R N     ++  +    +L+AF +S A  G+AGA FA     +SP
Sbjct: 190 ARLARSPFGLALNAARQNPTRVETIGLSPFRLRLTAFVISGAITGLAGALFADLNRFVSP 249

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            MF +  +  ++  +ILGG+  L       A+ I +  +  G++ ++   L        +
Sbjct: 250 TMFSWQMSGEIMVFIILGGVARLYGPVAGAALFITLEHMLGGLSEFWMIWLGLLLLLVVL 309

Query: 319 RHTTLMVIALF 329
                ++  L 
Sbjct: 310 FARGGVIGLLA 320


>gi|160901752|ref|YP_001567333.1| inner-membrane translocator [Petrotoga mobilis SJ95]
 gi|160359396|gb|ABX31010.1| inner-membrane translocator [Petrotoga mobilis SJ95]
          Length = 304

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 95/305 (31%), Gaps = 19/305 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L L++      +    Y      + +    W     
Sbjct: 10  LANAISLGSIYALIAIGYTMVYGILNLINFAHGDIFTFSMYFAFYAVTLFLFPWWAAFIF 69

Query: 99  SAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           + +++   G  +   + +   + +   I+ LI +      L  +  +  G        +L
Sbjct: 70  AIVLTTLLGATIERVAYRPLRKANAPKISALITAIGVSFFLQNFAIVVFGGRAKSFNPQL 129

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
               T               V   +  + ++         ++  + RT    A R +  +
Sbjct: 130 GVYPTQFA-----QVLTFGDVRIPLLTFIIIGVSILALFVLVWIVYRTKAGMAMRAVSKD 184

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             A   +           F + SA   + G  +A    +I P        +      ++G
Sbjct: 185 VTAAKLMGINTDRTISQTFMLGSALAAVGGILWAMKYPQIYPYT-GMIPGLKAFIAAVVG 243

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        IL     +            + F  +       +  I L +++L++ 
Sbjct: 244 GIGSIPGAMLGGFILGVAEIMI-----------VAFLPALAGYRDAIAYIILIVILLVKP 292

Query: 337 HSLLR 341
           + LL 
Sbjct: 293 NGLLG 297


>gi|121608869|ref|YP_996676.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121553509|gb|ABM57658.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 290

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 93/307 (30%), Gaps = 26/307 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             + +      +Y + A GL++V G L +++     +  +  Y+   L   +G+  ++ +
Sbjct: 9   PSLLNGLATGAVYALIAVGLTLVYGVLHIINFAHGASLMLALYAVYFLKECWGIDPYMAL 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++     A G  +    +          +L+ +     ++     +             
Sbjct: 69  PIAIPGMFALGYALQRAIINRASHGKDENSLLATLGIAIVMENLALLFFQSDTRS----- 123

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + +            +  +       G   +S  +   + RT +  A R +   
Sbjct: 124 ------IDTAYSLRTVAIGPAMIAVPKLLACAGALAVSGLLYWIMGRTDLGRAIRAVAKE 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++    +   +      +F +  A +G A  F   +              ++  +IV+LG
Sbjct: 178 KEGAKLMGIDVDHVYAMSFGIGLACLGAAACFLLPAYYV--NPQVGGGFVLVAFTIVVLG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM S +       ++     L           +              +      V+L+R 
Sbjct: 236 GMGSFAGALAGGLLVGVAESLGGLCLGESLGQIG-------------IFAIFIGVVLLRP 282

Query: 337 HSLLRLR 343
             L   +
Sbjct: 283 QGLFGAK 289


>gi|330960031|gb|EGH60291.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 529

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++   +       I    +I+      +       
Sbjct: 256 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMFQRYAPGAIEYYPLIALPVAFFVTAMIGMA 315

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 316 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 373

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 374 VLPYNRIVIIAFALFVVMLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 433

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 434 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVTAAFGLGIANKI 491

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 492 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 526


>gi|94310798|ref|YP_584008.1| inner-membrane translocator [Cupriavidus metallidurans CH34]
 gi|93354650|gb|ABF08739.1| ABC-type transporter, permease component [Cupriavidus metallidurans
           CH34]
          Length = 437

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/338 (15%), Positives = 117/338 (34%), Gaps = 32/338 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +L  L     ++L L +    S  +  ++  Q+ I ++FA   ++++G  G+LS  
Sbjct: 22  RPMNLLRWLIWSVTVVLMLVMPLIFSGGFAVTLLSQMGIMIIFALSYNMLLGQTGMLSFG 81

Query: 70  CVIAYAIGAYS-----YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
             +   +GA+       +I   +  L + +L  V  +     G+I G  + K  G   A+
Sbjct: 82  HAVYSGLGAFIAVHVLNMIGAGKVWLPVSMLPLVGGLAGAFFGVIFGYVTTKKSGTTFAM 141

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            T+ + E+     + +     G+ GI              + +    F      +   +Y
Sbjct: 142 ITMGIGEMVFASSLMFPDFFGGEGGIS------------TNRVVGEPFLGITYGHGRQVY 189

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y++   C LS   +     T +      +RDN +    +       +     +S+ F G+
Sbjct: 190 YLIAAWCLLSMVAMYAWTHTPLGRIANAVRDNPERVEFIGYNTQRVRYLVLILSAFFAGI 249

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA  A + + +S +      +  V+    +GG            +          +   
Sbjct: 250 AGALSAINFEIVSAENVSAVRSGGVLLAAFIGGAGVFFGPVIGAIVFTLFAVALSDLTKA 309

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +                  + +   ++++     +  L
Sbjct: 310 W---------------LLYLGLFFVMMVMFVPGGIASL 332


>gi|319404275|emb|CBI77868.1| permease protein of ABC transporter [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 353

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 66/339 (19%), Positives = 116/339 (34%), Gaps = 7/339 (2%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K   I      +   + FLF        Y   +   I I  + A  L++  G  G+ S
Sbjct: 1   MTKSLNIFLSFVSIIIFISFLFYADNYFNDYTLRIINLIAINAILAISLNLTYGFTGMFS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      AIGAY   I           ++ +   I+     +     +      L+ A +
Sbjct: 61  LGHAGFMAIGAYVCAIFLLSPEQK--EMMWILEPIAEPLKNLQLSFFVSVIISGLSAAII 118

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +   F  + +    +     G     R+  +  T  +            I +    +  
Sbjct: 119 GLLIAFPILRLGGDYLGIATLGFAEIIRVVIINATPLTN----GSLGIKGIPQYATLWWN 174

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
            G    +   I  L ++   N  R IRD++ A   +     F +  +F V + F G+ GA
Sbjct: 175 FGWLAFTIIFITLLLQSNTGNVLRAIRDDEIAAKIMGVNTFFYRCFSFTVGAFFAGIGGA 234

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             AA    I P MF F     ++ IV+ GG+ S++    ++ I+  ++E    +      
Sbjct: 235 LTAALISTIDPKMFNFILTFNILMIVVAGGLGSITGSVISSIIITIMLEWLRIVENPLNL 294

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
             +            +  I L  +IL     LL  R  S
Sbjct: 295 GFINIP-GLPGLRMVIFSIILLAIILYWQKGLLGQRELS 332


>gi|254699296|ref|ZP_05161124.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella suis bv. 5 str. 513]
 gi|261749739|ref|ZP_05993448.1| predicted protein [Brucella suis bv. 5 str. 513]
 gi|261739492|gb|EEY27418.1| predicted protein [Brucella suis bv. 5 str. 513]
          Length = 570

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 105/288 (36%), Gaps = 21/288 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91
               KY   +   + I  +    L +V G  G++SL  +    +GA+ +  +        
Sbjct: 24  LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + + + +  + +    + +GLP+L+ RG  LAI TL  +  F  +L              
Sbjct: 84  LAVWVLLGGLAAVPVSIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 133

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                       +   +  +L    + A ++ ++  + +  +W 
Sbjct: 134 ----------FPGQTSFTQVARPDLFASDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R +++A  +   +I  AKLSAFA+S+   G++G   A     +  + F   +++ + +
Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  + G            +++   EL   +N       + F       
Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291


>gi|332298884|ref|YP_004440806.1| ABC-type transporter, integral membrane subunit [Treponema
           brennaborense DSM 12168]
 gi|332181987|gb|AEE17675.1| ABC-type transporter, integral membrane subunit [Treponema
           brennaborense DSM 12168]
          Length = 299

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 92/289 (31%), Gaps = 8/289 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++        +GAY+   +   +G +    + +
Sbjct: 11  LINGLSLGSIYALIALGYTMVYGIVKLINFAHGDVLMLGAYAGYFVLRHFGTNP-ASMAL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++     ++ +   +F    L  A  +      N LI    I+              
Sbjct: 70  AFLVAMVLCAVIAILIERFAYRPLRSAPRL------NSLITAIAISLILQNGVRVLPFIG 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +         V        V++    L   +   +  T    A R +  + +
Sbjct: 124 PNPRQFPTMATVNISLGVVSISNIQLIVIVLSAVLMLILNYIINYTKTGKAMRAVSYDLQ 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +  ++       FA+ +      G  +A++  +I P M      +      +LGG+
Sbjct: 184 AASLMGISVNRTIAFTFALGAVLAAAGGVLYASAYPQIDPTM-GTMPGLKAFVAAVLGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            S+        IL     +  G     F+  + F     +       I 
Sbjct: 243 GSVPGAMLGGYILGIAETMTKGFLSSQFSDAISFSILIIILLVKPTGIL 291


>gi|209885977|ref|YP_002289834.1| inner-membrane translocator [Oligotropha carboxidovorans OM5]
 gi|209874173|gb|ACI93969.1| inner-membrane translocator [Oligotropha carboxidovorans OM5]
          Length = 320

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 57/325 (17%), Positives = 129/325 (39%), Gaps = 25/325 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L V+  L+  + +    +  Y+  M +    Y +   G +++ G+ GLLS    +   +G
Sbjct: 7   LWVLAALIAVMAVMPFFASSYMLLMLLPFFGYAIALLGFNLLFGTTGLLSFGHALFLGVG 66

Query: 78  AYSYVILGSRYGLSIWLLIP-VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           AY+   L S++G+  +  I  VS ++S    +I+G   +++   +  + TL    +F + 
Sbjct: 67  AYTASTLTSKFGVLSYEAILLVSMLVSALVAVIVGALCVRYTKIFFGMLTLAFGMLFHSF 126

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           L K+  +T G  G+ V   L            F              YY +L +  +  +
Sbjct: 127 LFKFYSVTGGDQGMRVLRPLLLGIDFGGGKTSF---------LIGPFYYYVLALFAVLGA 177

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++  +  +      + IR+N      +   I   +L+AF +S+ + G+ G   A +    
Sbjct: 178 VMWRITESPFGLHLKAIRENANKAAYVGVQIFRMRLAAFVISAVYGGVGGTILAITTGLA 237

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
            P++  ++ +  ++ + +LGG  +           + + ++   +  Y+           
Sbjct: 238 DPELAYWTHSGNLVFMAVLGGSGTFVGPVIGALAFVTLQDIVMTVTQYW----------- 286

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 +M   L L+++     +  
Sbjct: 287 ----RFVMGAVLVLLVIFLPQGISG 307


>gi|254438896|ref|ZP_05052390.1| amino acid or sugar ABC transport system, permease protein,
           putative [Octadecabacter antarcticus 307]
 gi|198254342|gb|EDY78656.1| amino acid or sugar ABC transport system, permease protein,
           putative [Octadecabacter antarcticus 307]
          Length = 315

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 96/322 (29%), Gaps = 15/322 (4%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
             G      Y+    +   IY + A G+++    L   +         GAY    + +  
Sbjct: 4   AFGFDFVNFYLIPGLVLGCIYALGAIGITLTFSILRFANFAHGEIMMSGAYLTWTVMAIA 63

Query: 89  GL-----SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           G         + +  +A++     +       K   +   I  ++ S     I+     +
Sbjct: 64  GYAGLTLHPLVAMVPAALLVILLFLGTDKLFYKPFRNADTIKVVMASFGMMLIIRSAVQV 123

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G   +     +      +R +          +I      ++  G   +  ++   L R
Sbjct: 124 IWGPNQLTFVRGIAKPNPVLRDMSSDIGMM---LIIPNKHLFIFAGTVIIVFALSYLLNR 180

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T I  A R + D+          +     + + V       AG F       +   M  F
Sbjct: 181 TRIGKAMRAVSDSPDLAHVTGIDVDKVIRATWIVGGICATAAGVFLVMDVQMLETTM-GF 239

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
              + + +  ILGG+           ++    EL        +  +           T +
Sbjct: 240 RMLLPMFAAAILGGIGKPYGAVFGGLVIGLAEEL------SAYPWIGDAPLLSPGYKTGV 293

Query: 324 MVIALFLVILMRSHSLLRLRTP 345
               + +++++R   L + R+ 
Sbjct: 294 AFAIMVVMLIVRPQGLFKGRSF 315


>gi|121604522|ref|YP_981851.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120593491|gb|ABM36930.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter membrane protein 1,
           HAAT family [Polaromonas naphthalenivorans CJ2]
          Length = 622

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 55/300 (18%), Positives = 114/300 (38%), Gaps = 19/300 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+    + L   A     Y  ++    LI ++F   L  ++   GL+S      +A+GAY
Sbjct: 318 VIALAFVLLAGLAWSGGAYWQTLAADALILMIFGISLQSMMALGGLVSFGHAAFFALGAY 377

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +  S +G ++ + +      + A   + G   ++  G YLA+ +L ++++      +
Sbjct: 378 GAALSHSLWGATLPVALATGCGAALAVAGVFGAAVVRSSGVYLAMLSLALAQVVWAGAAQ 437

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W  +T G  G                                  Y +L+ +  ++   + 
Sbjct: 438 WVSLTGGDNG-------------------LIGLALVTDDGRPVFYALLVALALIAVFALR 478

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           +L R+ +  A + +RD      +   ++ + K   F  S+   G+AG  FAA +  + P 
Sbjct: 479 FLSRSVMGAALQAVRDAPLRAAASGLSVGWLKYRVFVESAVLAGLAGGLFAAHKGAVFPS 538

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +   S ++  + +V+LGG+  L      + +L            Y+   L  F     + 
Sbjct: 539 LAAVSTSVDALLVVLLGGVHQLWGAVVGSLVLTYASAELGREVTYWRGLLGVFIMLIMVA 598



 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/301 (9%), Positives = 82/301 (27%), Gaps = 19/301 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +           + A GL+++ G   +++      + +GA       +            
Sbjct: 8   LLGGLSYATTLFLMAAGLTLIFGVTRIVNFAHGSFFMLGALFTAHWVTN--WFPAWGESG 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +                 +YL +  +  +     ++  +         +        
Sbjct: 66  LLYLIAIFLGAACAGLAGAIAEYLLLRRMSDAPELYQLVATFGLTLAMHDAMQWGFGPDE 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +       ++          + ++   ++     +   + + LRR+      R    ++ 
Sbjct: 126 VFAPRFPGLKG-SVQIGDEFFPVYQLAMIALGPLVWLGLHVLLRRSLFGQRLRAATQDRS 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L        L A  +  A  G+ GA                +  +    +V+ GG+
Sbjct: 185 MLAALGVNPRPLMLGAVVLGCALAGLGGALQLPREPA--HLQMDMNVIVETFVVVVTGGL 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++  V                    +F      ++ + + +V++ R   
Sbjct: 243 GSIGGAFVAALLIGLVHAFGTA--------------AFPQATLVVVFLTMAVVLVFRPQG 288

Query: 339 L 339
           L
Sbjct: 289 L 289


>gi|260166830|ref|ZP_05753641.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella sp. F5/99]
 gi|261756208|ref|ZP_05999917.1| branched-chain amino acid ABC transporter [Brucella sp. F5/99]
 gi|261736192|gb|EEY24188.1| branched-chain amino acid ABC transporter [Brucella sp. F5/99]
          Length = 570

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91
               KY   +   + I  +    L +V G  G++SL  +    +GA+ +  +        
Sbjct: 24  LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + + + +  + +   G+ +GLP+L+ RG  LAI TL  +  F  +L              
Sbjct: 84  LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 133

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                       +   +  +L    + A ++ ++  + +  +W 
Sbjct: 134 ----------FPGQTSFTQVARPDLFASDRSYFLFVLLAYGIIAVVLEFISHSRLGASWL 183

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R +++A  +   +I  AKLSAFA+S+   G++G   A     +  + F   +++ + +
Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  + G            +++   EL   +N       + F       
Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291


>gi|241763310|ref|ZP_04761367.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
 gi|241367585|gb|EER61872.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
          Length = 331

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 124/302 (41%), Gaps = 15/302 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             ++++ + +FA   ++++G  G+LS          AY        +GL+  + + +   
Sbjct: 30  FVMKLMCFALFASAFNLLLGYTGMLSFGHAAFLGGAAYVTGHTLKVWGLTPEIGLLLGTA 89

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
             G  G+I+G  +++  G Y  + TL ++++     ++    T G+ G+    R      
Sbjct: 90  AGGLLGLIVGFFAIRRTGIYSTMITLALAQMLFFACLQAP-FTGGEDGLQAVPR------ 142

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F    +  ++ MYYV+L +   +  +I+    +      + I++N+    
Sbjct: 143 -------GKLFGVVDLASDLTMYYVVLVIVVAAFLLIVRTIHSPFGQVLKAIKENEPRAT 195

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+A  G+AGA         +     ++ +  V+ + ++GG+ +L
Sbjct: 196 SLGYDTNRFKLLAFVLSAALAGLAGALKTLVLGFATLSDVHWTASGHVVLMTLVGGLGTL 255

Query: 282 SKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           S     +A+++ +      +  +    + + +  +     T +  +   + +L     ++
Sbjct: 256 SGPLVGSAVVVLLENKLGEIGHFLATLTSVDWFNTLGESVTMVTGLIFVICVLAFRRGVM 315

Query: 341 RL 342
             
Sbjct: 316 GE 317


>gi|153008729|ref|YP_001369944.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
 gi|151560617|gb|ABS14115.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
          Length = 329

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 133/337 (39%), Gaps = 33/337 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++ +   L+  L         +     +++L + +FA   ++++G  G+LS      +
Sbjct: 23  LSIIVLGIALVGLLAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 78

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              AY        +G++  L + +  + + A G+++G  +++ +G Y  + TL ++++F 
Sbjct: 79  GGAAYITAHTVKIWGVTPELGLVLGVLAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 138

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              ++                       ++ + R + F    +   + MYY +L +  L 
Sbjct: 139 FFCLQATFTHG--------------EDGLQGVPRGYLFGIIDLNQPMNMYYFVLAVFVLG 184

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +I  +  +      +++R+N+    SL  ++   KL+AF +S+A  G+AG   A    
Sbjct: 185 VFVIWRIINSPFGMILKSVRENENRAVSLGYSVNRYKLAAFVMSAALAGLAGGLKALVFQ 244

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             +     +  +  VI + +LGG+ +L       A ++ +       +F           
Sbjct: 245 FATLTDVGWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNYLATSDFPV--------- 295

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 T +  +     +L+    ++     S   ++
Sbjct: 296 ------TIVTGVIFMACVLLFRKGIVGEFYASRIGKK 326


>gi|300813936|ref|ZP_07094240.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511999|gb|EFK39195.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 295

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 51/307 (16%), Positives = 104/307 (33%), Gaps = 29/307 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY----GLSIWL 94
           I +      IY + A G ++V G   L++        IGAY+ V   +      G  +WL
Sbjct: 7   IINGLSLGSIYALVALGYTMVYGIALLINFAHGEIIMIGAYTVVFSTTLCLAKIGAPLWL 66

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
            I  + ++    G+ +   + +   +   I+ LI +      L     +  G   +    
Sbjct: 67  SIIPAVILCTILGLFIERVAYRPLRNSPRISNLITAIGVSLFLQNIVMLFFGAGAMST-- 124

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                    +SL +        +         ++    L+ ++  ++ RT +  A     
Sbjct: 125 ---------QSLFKTQIVKLGSLEIPFISLITIVITAILTVALQYFMTRTKMGKALIATS 175

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           ++ KA   +   +  A +  F + SA  G+A   +  +  +  P M      I   +  +
Sbjct: 176 EDSKAAQLVGINVDNAMVLTFGIGSALAGVAAVLYMGTYAQAQPLM-GSMLGIKAFTAAV 234

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +GG+  +        +L  V  L            + F               L +V+L+
Sbjct: 235 IGGIGLVPGAVIGGLLLGIVEALTRAYLSSKLADAIVFS-------------ILIIVLLI 281

Query: 335 RSHSLLR 341
           +   LL 
Sbjct: 282 KPTGLLG 288


>gi|254711252|ref|ZP_05173063.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella pinnipedialis B2/94]
 gi|256030119|ref|ZP_05443733.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella pinnipedialis M292/94/1]
 gi|261318846|ref|ZP_05958043.1| predicted protein [Brucella pinnipedialis B2/94]
 gi|265987148|ref|ZP_06099705.1| predicted protein [Brucella pinnipedialis M292/94/1]
 gi|261298069|gb|EEY01566.1| predicted protein [Brucella pinnipedialis B2/94]
 gi|264659345|gb|EEZ29606.1| predicted protein [Brucella pinnipedialis M292/94/1]
          Length = 570

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91
               KY   +   + I  +    L +V G  G++SL  +    +GA+ +  +        
Sbjct: 24  LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + + + +  + +   G+ +GLP+L+ RG  LAI TL  +  F  +L              
Sbjct: 84  LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDMVLATIT---------- 133

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                       +   +  +L    + A ++ ++  + +  +W 
Sbjct: 134 ----------FPGQTSFTQVARPDLFASDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R +++A  +   +I  AKLSAFA+S+   G++G   A     +  + F   +++ + +
Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  + G            +++   EL   +N       + F       
Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291


>gi|126731076|ref|ZP_01746884.1| ABC transporter ATP-binding protein [Sagittula stellata E-37]
 gi|126708378|gb|EBA07436.1| ABC transporter ATP-binding protein [Sagittula stellata E-37]
          Length = 349

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 60/331 (18%), Positives = 121/331 (36%), Gaps = 27/331 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A     ++ L + A  +  ++  +     I  + A  L  + G  G++SL  +   A G 
Sbjct: 23  AWWVLGVILLTMPAWANDFFLFQVMGWTFILGIIALSLMFLAGYGGMVSLIQMSVAATGG 82

Query: 79  YSYVILGSRYGL-----SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           Y   I G+         S WL +P++ +I+   G I+G  +++  G Y  + TL ++  F
Sbjct: 83  YMVAIFGTSGAELSMGLSWWLYLPLAILIAAIFGTIVGALAVRTEGIYTIMITLAIAAAF 142

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
                +   I NG +G  +       G   R                   YY+ LG    
Sbjct: 143 FYFTRQNYTIFNGYSGFNLVVPPDLFGIDWRQ--------------PAPFYYLTLGCALA 188

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
             + + ++ R     A + +RDN +   +L   +   +++A+  +S    + G       
Sbjct: 189 CYAAVSYVSRAPFGLALQGVRDNPRRMAALGFNVTAHRVAAYTFASVIAAIGGILLVWQN 248

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
            +I+P        I ++ I ++GG++          I + +      +   +  S  +F 
Sbjct: 249 AQIAPGTAGIPAVIDILVIAVVGGISRPIGAFIGALIYVLLRTFSPDVLLAFGMSGERFK 308

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                    L+ +    V+      +L L  
Sbjct: 309 --------LLIGLGFLAVVFFSPDGVLGLWE 331


>gi|15807115|ref|NP_295844.1| branched-chain amino acid ABC transporter permease [Deinococcus
           radiodurans R1]
 gi|6459919|gb|AAF11671.1|AE002047_4 branched-chain amino acid ABC transporter, permease protein
           [Deinococcus radiodurans R1]
          Length = 348

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/338 (13%), Positives = 107/338 (31%), Gaps = 39/338 (11%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L + +  ++  + + +      +Y +FA G +++   LG+++      + +GAY    L 
Sbjct: 21  LGVAMEPSQLIQNLVNGLAIGSVYAIFALGYTLIFSILGIINFAQGAVFTLGAYLTYTLV 80

Query: 86  SRYG----------------------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           S                          +  L   + + ++G   +++   + +      A
Sbjct: 81  SGQFENNGLLKGINLFPDGSPLAGNPWAFGLATLLGSALAGLIAVVIERLAFRPMRARGA 140

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
              L +       L+    I         +      G    +L          V      
Sbjct: 141 EPLLALVSSLGVALVIVNLIQLLVGAESYSFPANAYGEFPPALTFHVGDKV--VAVRTVQ 198

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
             +      +   +   + RT I  A R + +N      L  ++    L  F +S    G
Sbjct: 199 LVIFAVSMVMLGILGYVIGRTKIGKALRAVAENPGTASLLGISVDRYVLITFFLSGFLGG 258

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           +AG   + +   I    F  +  +  +++++LGG+ S+        ++            
Sbjct: 259 LAGTLVSLAFG-IGGPYFGQAFGLKGLAVIVLGGLGSIPGAVLGGLVIGLAEAFV----- 312

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                       ++     +    LF+V+L+R   LL 
Sbjct: 313 ---------PADYSAYKDAVAFALLFIVLLLRPQGLLG 341


>gi|299066768|emb|CBJ37962.1| putative ABC-type branched-chain amino acid transporter, membrane
           component [Ralstonia solanacearum CMR15]
          Length = 440

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 104/310 (33%), Gaps = 2/310 (0%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   +   L      L+ L L     Q +  ++  Q+ I ++FA   ++++G  G+LS  
Sbjct: 23  KPLNLARWLIWGTTALVMLVLPLIWPQGFAITLLSQMGIMIIFALSYNMLLGQAGMLSFG 82

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
             +   +GA+  V L +R G +  L I     ++          +L              
Sbjct: 83  HAVYAGLGAFVAVHLLNRIGAAPALGIGGPLAVALLPVAGGLGGALFGVLFGYVTTRRAG 142

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +      L   + +    + + + D     G    +                 +YY++  
Sbjct: 143 TTFAMITLGIGEMVF--ASALMLPDFFGGEGGVSTNRSIGEPLLGISFGPARQVYYLIAV 200

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
            C +S +++    +T +      +RDN +    +       +     +S+ F G+AGA  
Sbjct: 201 WCLISMALMYAWTQTPLGRLANAVRDNPERVAFVGYDTQRVRYLVVILSAFFAGIAGALS 260

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + + ++ +      +  V+    +GGM +         + +       G+   +   L
Sbjct: 261 CINFEIVTAENVSAVRSGAVLLAAFIGGMGTFFGPIIGAVLTVFFTVALSGLTKAWLLYL 320

Query: 310 LKFDCSFNMR 319
                   M 
Sbjct: 321 GLLFVLMVMY 330


>gi|332085349|gb|EGI90521.1| high-affinity branched-chain amino acid transport system
           permeaseprotein livM domain protein [Shigella boydii
           5216-82]
          Length = 159

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 15/153 (9%)

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +S
Sbjct: 13  INRLLRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVS 72

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F F+E   V++IV+LGGM S   +  A  +L+   EL    N Y             
Sbjct: 73  PESFTFAEPAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEY------------- 119

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                ++   + L+++ R   LL +  P   L+
Sbjct: 120 --SMLMLGGLMVLMMIWRPQGLLPMTRPQLKLK 150


>gi|291539475|emb|CBL12586.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           (TC 3.A.1.4.-) [Roseburia intestinalis XB6B4]
          Length = 293

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 101/305 (33%), Gaps = 23/305 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      +Y + A G ++V G   +L+        IG Y   +  +  G    + +
Sbjct: 5   SYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGCYVVFLAMNGQGWPPLVAV 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +S ++    G+++   + K       +A LI +      L     +  G       + +
Sbjct: 65  VLSVIVCTVLGIVIEKIAYKPLRRATPLAVLITAIGVSYFLQNAALLLFGADTKSFTNVV 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +             +         +L    + A +++++++T    A   + ++
Sbjct: 125 TLPSLKLAG---------GSLTISGTTIVTVLACVVIMAGLMIFIKKTKAGQAMLAVSED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ S    +AG  F ++   ++P        I   +  + G
Sbjct: 176 KDAAQLMGVNVNATISLTFAIGSGLAAIAGVLFCSAYPTLTPYT-GSMPGIKAFTAAVFG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+                  G        +L      +     ++   L +V+L++ 
Sbjct: 235 GIGSI-------------PGALIGGILLGIIEILGRAYISSQLSDAIVFAVLIIVLLVKP 281

Query: 337 HSLLR 341
             +L 
Sbjct: 282 TGILG 286


>gi|46202077|ref|ZP_00208372.1| COG0559: Branched-chain amino acid ABC-type transport system,
           permease components [Magnetospirillum magnetotacticum
           MS-1]
          Length = 304

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 95/312 (30%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGL 90
           + +      IY + A G ++V G LG+++      Y +GA+  +I          +   L
Sbjct: 8   LINGLTLGAIYGLVALGYTMVYGVLGMINFAHGTIYMVGAFISLITFLAATTLLGTSVPL 67

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           ++ L +  +  ++   G      + +       +A LI +     +L  +     G    
Sbjct: 68  ALVLTLFAAMGLTALWGWTAERVAYRPLRSAPRLAPLISAIGVSIMLQNFVAQAQGARAK 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +           +  I         V        ++     L A     + RTA+  A 
Sbjct: 128 PLPP-------VFKGGITLMDGGGFVVSLSWMQMVIMALTLALMAVFTWIITRTALGRAQ 180

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    + K    L   +     + F + +   G+AG         I      F   I   
Sbjct: 181 RACEQDMKMASLLGIDVDRVISTTFVIGAGLAGVAGMMVTLYYGVIDFY-IGFLAGIKAF 239

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ SL        ++  +           +  +  F               L  
Sbjct: 240 TAAVLGGIGSLPGAMLGGLLIGLIEAFWSAYFSIEYKDVATFS-------------ILVA 286

Query: 331 VILMRSHSLLRL 342
           V++ R   LL  
Sbjct: 287 VLVFRPTGLLGR 298


>gi|229102570|ref|ZP_04233274.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus Rock3-28]
 gi|228680797|gb|EEL34970.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus Rock3-28]
          Length = 298

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 59/313 (18%), Positives = 125/313 (39%), Gaps = 31/313 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPV 98
           M  QI I+ +FA    I++G  G++S    + + IGAY   +L  R      + ++ I  
Sbjct: 1   MFTQIFIFAIFAMSFDILLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFFIGIIA 60

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++S     I+GL SL+ +  + A+ TL +S++F  +  KW+ +T+G  G        F
Sbjct: 61  AIIVSAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPEIF 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                    YYV          ++    +++I    + I  N++
Sbjct: 121 RDRF-------------------TFYYVTFICLINIFILLRLFTKSSIGKVLKAISQNEQ 161

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   ++  K+ A  V+     ++G  F  +   ++  +F     +  + + ++GG+
Sbjct: 162 RVEALGYKVLHYKIIASVVAGIVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGV 221

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L            +       +  Y+ S L  +     R T ++ +   +V+L+    
Sbjct: 222 GTLI---------GAIAGAGIIESLKYYLSELATEYPIFERWTIILGLLYIIVLLVFPKG 272

Query: 339 LLRLRTPSNFLER 351
           L+        ++R
Sbjct: 273 LVGTVKQLKSVKR 285


>gi|253584207|ref|ZP_04861405.1| branched-chain amino acid transport system permease livH
           [Fusobacterium varium ATCC 27725]
 gi|251834779|gb|EES63342.1| branched-chain amino acid transport system permease livH
           [Fusobacterium varium ATCC 27725]
          Length = 294

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 91/306 (29%), Gaps = 28/306 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL---SIWLL 95
           I +      IY + + G ++V G   L++        +GAY  +     +      +WL 
Sbjct: 7   IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMVGAYVSLFSIPIFTRIGLPVWLT 66

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  + +I    G +    + +   +   I+ LI +     +L                  
Sbjct: 67  VFPAIIICVILGTLTERIAYRPLRNSPRISNLITAIGVSLLLENTFMKLFTPN------- 119

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                     +          +         ++    LS  +  ++++T    A     +
Sbjct: 120 ----TRAFPKVFTNAPIIIGRMHLNFGTVVTIVLTIALSVGLQYFMKKTKYGKAMMATSE 175

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   +   +       FA+ S    +A   + ++  ++ P M      I      +L
Sbjct: 176 DYGAAKLVGINVDNTIQLTFAIGSGLAAVASVLYVSAYPQVQPLM-GSMLGIKAFIAAVL 234

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  L        IL  V  L                          +   L +V+L++
Sbjct: 235 GGIGILPGAVIGGFILGIVESLTRAYLSSQLADA-------------FVFAILIVVLLVK 281

Query: 336 SHSLLR 341
              +L 
Sbjct: 282 PTGILG 287


>gi|282882304|ref|ZP_06290935.1| high-affinity branched-chain amino acid transport system permease
           protein LivH [Peptoniphilus lacrimalis 315-B]
 gi|281297854|gb|EFA90319.1| high-affinity branched-chain amino acid transport system permease
           protein LivH [Peptoniphilus lacrimalis 315-B]
          Length = 295

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 104/307 (33%), Gaps = 29/307 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY----GLSIWL 94
           I +      IY + A G ++V G   L++        IGAY+ V   +      G  +WL
Sbjct: 7   IINGLSLGSIYALVALGYTMVYGIALLINFAHGEIIMIGAYTVVFSTTLCLAKIGAPLWL 66

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
            I  + ++    G+ +   + +   +   I+ LI +      L     +  G   +    
Sbjct: 67  SIIPAVILCTILGLFIERVAYRPLRNSPRISNLITAIGVSLFLQNIVMLFFGAGAMST-- 124

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                    +SL +        +         ++    L+ ++  ++ +T +  A     
Sbjct: 125 ---------QSLFKTQIVKLGSLEIPFISLITIVITAILTVALQYFMTKTKMGKALIATS 175

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           ++ KA   +   +  A +  F + SA  G+A   +  +  +  P M      I   +  +
Sbjct: 176 EDSKAAELVGINVDNAMVLTFGIGSALAGVAAVLYMGTYAQAQPLM-GSMLGIKAFTAAV 234

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +GG+  +        +L  V  L            + F               L +V+L+
Sbjct: 235 IGGIGLVPGAVIGGLLLGIVEALTRAYLSSKLADAIVFS-------------ILIIVLLI 281

Query: 335 RSHSLLR 341
           +   LL 
Sbjct: 282 KPTGLLG 288


>gi|158317314|ref|YP_001509822.1| ABC transporter related [Frankia sp. EAN1pec]
 gi|158112719|gb|ABW14916.1| ABC transporter related [Frankia sp. EAN1pec]
          Length = 891

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 64/327 (19%), Positives = 129/327 (39%), Gaps = 20/327 (6%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V   L+ + +                +++ +    L +++G    +SL  +    +GAY+
Sbjct: 314 VGVALVGIIVVLLVGDARWRDAATLSIVFGILVLSLVVLIGYANQISLAQMTVAGLGAYA 373

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
            V L   + L   L     A +    G+++GLP+L+ RG  L I T+ M+     +L + 
Sbjct: 374 AVRLDIDHSLPFVLAPVAGAAVGAIAGLLVGLPALRVRGINLGILTMGMAVAVSGVLFES 433

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
              T G +G                    F        +     +V L    ++ +++  
Sbjct: 434 THYTGGISGSQPHLP------------TVFGLDVDAARHPDRYGFVALFWLVVAGAVVAV 481

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +RR+ +      +R N++A  S+  ++  AKLSAF +SS+  G AG         ++   
Sbjct: 482 VRRSRLGRRLLVVRTNERAAASVGVSVARAKLSAFVISSSLAGAAGVLLGFRSSSVTFTQ 541

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F F E+I ++S+ ++ G+TS++       +  G +        +               +
Sbjct: 542 FSFMESINLVSLAVIAGVTSITGGLLGGVMAFGGLVYLLISRLHIG--------FVTDNY 593

Query: 321 TTLMVIALFLVILMRSHSLLRLRTPSN 347
            T+   AL + +L+  + +   R   N
Sbjct: 594 ATIFGAALVVTVLVHENGVAWHRRFQN 620



 Score = 44.1 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 31/291 (10%), Positives = 79/291 (27%), Gaps = 13/291 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           ++         +Y + A G+  +      ++         GA  +  L    G++  L  
Sbjct: 8   QFALLGLGVGGVYAVSAVGIVAIHRGSRTINFAHGGIALWGALVFYWLRDDQGMAAGLAA 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ + + A G  + L  ++       ++ ++ +      LI       G A        
Sbjct: 68  VLTLLSAAAFGAAVYLLVIRIIRHRTQLSRMVATLGILGTLIGLAHSVFGSAQRV----- 122

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   +                    +      +  ++  W     +    R + ++
Sbjct: 123 ------PDTSFPSSGVDVFGQTIPSERIIIFALAVVVVLALSAWSAWARLPLMTRAMAEH 176

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  +L  +        +A+ S     +G   A    +    M       +  ++  LG
Sbjct: 177 ESAAQALGASPHLLGSLNWALGSVLAAASGILVAPIVGQFDTAMMTVMAFALAAAL--LG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              S          L     +   +   +  S  +      +    +M I 
Sbjct: 235 RFDSYLLALAGGIALGVGESVVTHLVAEHVPSRFQLGWPQTVPFVAVMAIL 285


>gi|26987876|ref|NP_743301.1| inner-membrane translocator [Pseudomonas putida KT2440]
 gi|148546417|ref|YP_001266519.1| inner-membrane translocator [Pseudomonas putida F1]
 gi|170720343|ref|YP_001748031.1| inner-membrane translocator [Pseudomonas putida W619]
 gi|325275263|ref|ZP_08141220.1| inner-membrane translocator [Pseudomonas sp. TJI-51]
 gi|24982580|gb|AAN66765.1|AE016304_10 branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas putida KT2440]
 gi|148510475|gb|ABQ77335.1| inner-membrane translocator [Pseudomonas putida F1]
 gi|169758346|gb|ACA71662.1| inner-membrane translocator [Pseudomonas putida W619]
 gi|313497500|gb|ADR58866.1| Inner-membrane translocator [Pseudomonas putida BIRD-1]
 gi|324099604|gb|EGB97493.1| inner-membrane translocator [Pseudomonas sp. TJI-51]
          Length = 307

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 87/290 (30%), Gaps = 2/290 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I  +   +     +P+
Sbjct: 11  LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAMMGIHSLPI 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
              ++    + +                   + +   I  I           +    +  
Sbjct: 71  LMTVAFVATIFVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNTVLLSQDSKDK 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   +     F    +  V+       V +        + L++ R+ +  A R   ++ 
Sbjct: 131 SIPNLIPGSFSFGPGGAEEVLISYMQILVFVVTLVAMTLLTLFISRSRLGRACRACAEDI 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +A    +     I+P+   F   +   +  +LGG
Sbjct: 191 KMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNA-GFLVGLKAFTAAVLGG 249

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           + S+        +L         +    +  ++ F     +       I 
Sbjct: 250 IGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299


>gi|93005821|ref|YP_580258.1| inner-membrane translocator [Psychrobacter cryohalolentis K5]
 gi|92393499|gb|ABE74774.1| inner-membrane translocator [Psychrobacter cryohalolentis K5]
          Length = 592

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/288 (11%), Positives = 88/288 (30%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       IGAY+  ++ + +      +     + +     ++       
Sbjct: 319 ITFGLLGVINMAHGELIMIGAYATYMVQNLFQAYFPSMTGWYLVAAIPVAFLVSAIIGMV 378

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 I   +     + +L  +         + +      +  +    +      SS +
Sbjct: 379 IER--IIIRPLYGRELETLLATFGVSLILMQLVRMIFGAQNVEVSNVDWLSGAYQVSSIL 436

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++     +   ++  L +T      R +  N++   ++  +     + AF +
Sbjct: 437 VLPFNRIAIIGFTIIILMLLVYLLNKTRFGLFVRAVTQNRQMARAVGISSARIDMLAFGL 496

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG   A   +        +  +  ++ +V                +      +
Sbjct: 497 GSGLAGLAGCALAQVGNVGPDLGQTYIIDAFLVVVV--------------GGVGQVWGAV 542

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
              +      ++L+      M    L+ + + L I  R   L  L+  
Sbjct: 543 LASLGLGVSGTVLEIGIGAVMAKIVLL-VLVILFIQKRPQGLFALKGR 589


>gi|163735969|ref|ZP_02143396.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
 gi|161390786|gb|EDQ15128.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
          Length = 326

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/326 (14%), Positives = 117/326 (35%), Gaps = 9/326 (2%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   L++   L    + KY   +     + ++   GL + +G+  L +L+      IGA
Sbjct: 1   MLAAILIVIGVLATFFASKYQLRLIYSAYVNLIVVLGLQVFMGNSRLTNLSHSAFMGIGA 60

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  I  +         + +  +        +   +L      +    +  +  F   + 
Sbjct: 61  YAAAICVTP--------VAMKQISLPDAPWGLNTFALDPVTSAIVALLITGAIAFLVGIF 112

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
             +    G     +A  +      +     F    + F I ++F    ++ +  +   I+
Sbjct: 113 IVRMTGTGATIATLAVLVIVHSIFLYRTDIFKGNQAFFGIPQVFSLTSIVVLAVVVVFIV 172

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
              R +      R   D++    ++   ++  +L A+ +S   +  AG  +A     IS 
Sbjct: 173 RGFRESPWGVMLRASADDETGSAAMGVNVVRLRLIAWVLSGLILAGAGIAYAYFLGTISA 232

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F F+   + ++++I GGM +++     T  +   +E+   +        + F     +
Sbjct: 233 RPFYFNHVFLTLAMLIFGGMRTVTGAVLGTFAISFGLEVVRWLETGPVIVGIDFPEVLGL 292

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRT 344
               ++ + + L + +R   ++  R 
Sbjct: 293 SG-VMLGLVIVLTMALRPVGVMGDRE 317


>gi|86750791|ref|YP_487287.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86573819|gb|ABD08376.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 305

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 104/312 (33%), Gaps = 28/312 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGL 90
           + +  +   IY + A G ++V G +G+++      + IG +  +I          +   L
Sbjct: 8   LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLILVSFGLTFVPL 67

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + +++ VS  I+   G  +   + +   +   +A ++ +     +L+ +  +  G    
Sbjct: 68  ILLVVLLVSMAITALYGWTVERIAYRPLRNSFRLAPMLSAIGMSFVLMNFAQVAQGARVK 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            V   +    T   S   F    S+  I  +    VLL      A     + +T +    
Sbjct: 128 PVPPIITGGYTLHESADGFNVQLSNVQIVVVITTIVLL------AIFTWLVAKTRLGRDM 181

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    ++     L   +       F + +A   +AG  +      +   M  F   I   
Sbjct: 182 RACEQDRTMASLLGVDVDRTISMTFVIGAALASVAGMMYLLYYGLVDFFM-GFVAGIKAF 240

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ SL        ++  +           +  +  F               L +
Sbjct: 241 TAAVLGGIGSLPGAMLGGLLIGLIETFWSAYFSVEYKDVAAFS-------------ILIV 287

Query: 331 VILMRSHSLLRL 342
           V++     LL  
Sbjct: 288 VLIFMPTGLLGR 299


>gi|161621218|ref|YP_001595104.1| inner-membrane translocator:ABC transporter [Brucella canis ATCC
           23365]
 gi|254702418|ref|ZP_05164246.1| inner-membrane translocator:ABC transporter [Brucella suis bv. 3
           str. 686]
 gi|260568679|ref|ZP_05839148.1| branched-chain amino acid ABC transporter [Brucella suis bv. 4 str.
           40]
 gi|261752981|ref|ZP_05996690.1| predicted protein [Brucella suis bv. 3 str. 686]
 gi|161338029|gb|ABX64333.1| inner-membrane translocator:ABC transporter [Brucella canis ATCC
           23365]
 gi|260155344|gb|EEW90425.1| branched-chain amino acid ABC transporter [Brucella suis bv. 4 str.
           40]
 gi|261742734|gb|EEY30660.1| predicted protein [Brucella suis bv. 3 str. 686]
          Length = 570

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 105/288 (36%), Gaps = 21/288 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91
               KY   +   + I  +    L +V G  G++SL  +    +GA+ +  +        
Sbjct: 24  LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + + + +  + +   G+ +GLP+L+ RG  LAI TL  +  F  +L              
Sbjct: 84  LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 133

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                       +   +  +L    + A ++ ++  + +  +W 
Sbjct: 134 ----------FPGQTSFTQVARPDLFASDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R +++A  +   +I   KLSAFA+S+   G++G   A     +  + F   +++ + +
Sbjct: 184 AVRHSERAAAANGISIPRVKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  + G            +++   EL   +N       + F       
Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291


>gi|170736643|ref|YP_001777903.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
 gi|169818831|gb|ACA93413.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
          Length = 291

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 98/303 (32%), Gaps = 27/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I ++   + +  + A GL+IV G + +++L       +GAY+  +  S  G   +    +
Sbjct: 4   ILNILSYVSVLTLVALGLAIVFGLMDIVNLAHAEWVTMGAYTLAVAQSVGGQHAFWAALL 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A I GA         +        + TL+ +     I+ K   +  G   + V      
Sbjct: 64  AAPIVGAGLGWCLERFVIRLLYTRPLDTLLATYAVSLIVQKAIELVFGTQPMLVYAPFN- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                               Y  +  +V+     ++A   +   RT      R +  +  
Sbjct: 123 -----------ATVEVPGGSYPAYRMFVIGVALAVTAGCWVLFTRTRFGTKLRAVIQHPA 171

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              ++          AF   +A   +AG   A      S      S       +++LGG+
Sbjct: 172 MAEAVGINTRRLNRVAFCGGAALASLAGVLVAPMVSVESH--LGVSYLAKAFFVIVLGGI 229

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++     +A +  +  L          S              +++I   ++I  R   
Sbjct: 230 GSVAGSILGSAFVGTIETLLSYRVDPSLASA-------------IVLIVSIVLIRFRPQG 276

Query: 339 LLR 341
           LL 
Sbjct: 277 LLP 279


>gi|56696708|ref|YP_167069.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56678445|gb|AAV95111.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 298

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 95/302 (31%), Gaps = 21/302 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +       Y + A GL+IV   +GL++       A+G Y+ V + +    +  ++I  +
Sbjct: 9   MNALSFGAEYALLALGLAIVFSIMGLVNFAHGEIIAVGGYTMVAMAALALSNPLIVIGAA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + + A  M++   + +          L+ +     +L     +                
Sbjct: 69  VLAAVAGSMLLERVAFRPVRYADPTTGLLTAFGVSIVLQNLFLLLVSP----------RP 118

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                     +      +       +  L    +  +++L+LRRT +  A R    + + 
Sbjct: 119 IAVTSLYFLDWPVDLGAIRVSSLQLFEALTTAVVIVALMLFLRRTVLGLAMRAASLDFEM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                         AFA+S    G+A  F  A R  + P    F   +      ++GG  
Sbjct: 179 VRLSGIRANRVFAMAFAISGLLAGIACVFIMARRGSVDPH-LGFDPVLKAFVACVVGGFG 237

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           SL        +L  V      M       +              +   + +V++ R   +
Sbjct: 238 SLPGAVLGGFLLGAVEVAMLVMLPQSLGGMTD----------AFVFGIIAMVLIWRPDGI 287

Query: 340 LR 341
           L 
Sbjct: 288 LS 289


>gi|23500888|ref|NP_700328.1| branched chain amino acid ABC transporter ATP-binding/permease
           [Brucella suis 1330]
 gi|256015934|ref|YP_003105943.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella microti CCM 4915]
 gi|256059769|ref|ZP_05449964.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella neotomae 5K33]
 gi|256158290|ref|ZP_05456199.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella ceti M490/95/1]
 gi|256252769|ref|ZP_05458305.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella ceti B1/94]
 gi|261219848|ref|ZP_05934129.1| predicted protein [Brucella ceti B1/94]
 gi|261323749|ref|ZP_05962946.1| predicted protein [Brucella neotomae 5K33]
 gi|265996810|ref|ZP_06109367.1| predicted protein [Brucella ceti M490/95/1]
 gi|23464557|gb|AAN34333.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella suis 1330]
 gi|255998594|gb|ACU50281.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella microti CCM 4915]
 gi|260918432|gb|EEX85085.1| predicted protein [Brucella ceti B1/94]
 gi|261299729|gb|EEY03226.1| predicted protein [Brucella neotomae 5K33]
 gi|262551107|gb|EEZ07268.1| predicted protein [Brucella ceti M490/95/1]
          Length = 570

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91
               KY   +   + I  +    L +V G  G++SL  +    +GA+ +  +        
Sbjct: 24  LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + + + +  + +   G+ +GLP+L+ RG  LAI TL  +  F  +L              
Sbjct: 84  LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 133

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                       +   +  +L    + A ++ ++  + +  +W 
Sbjct: 134 ----------FPGQTSFTQVARPDLFASDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R +++A  +   +I  AKLSAFA+S+   G++G   A     +  + F   +++ + +
Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  + G            +++   EL   +N       + F       
Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291


>gi|89093321|ref|ZP_01166270.1| high-affinity branched-chain amino acid transport system permease
           protein [Oceanospirillum sp. MED92]
 gi|89082300|gb|EAR61523.1| high-affinity branched-chain amino acid transport system permease
           protein [Oceanospirillum sp. MED92]
          Length = 308

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 95/304 (31%), Gaps = 15/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +       + +P+
Sbjct: 12  LINGLTIGSTYALIAIGYTMVYGIIGMINFAHGEIYMIGSYVTFIVIAGLLGMGLVSLPI 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
             +I     +I+                   + +   I  I          G+    R  
Sbjct: 72  VLLIVLIVAVIVSSTYGWTVERVAYRPLRGSNRLIPLISAIGMSIFLQNYVGLSQGYRDA 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L   V     F       V        + +       ++ L++ R+ +  A R   ++ 
Sbjct: 132 ALPPQVVGGWTFGDPAVFEVTISYMQSIIWIATLLTMTALTLFISRSRMGRACRACSEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                L           F V +A   +AG   +     I+P +  F   +   +  +LGG
Sbjct: 192 GMTNLLGIDTNKIIALTFIVGAALAAVAGILLSLYYGVINPFV-GFIAGLKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     +        +  ++ F               L L++L R  
Sbjct: 251 IGSIPGAMLGGLILGVTEAMTAAFFPAEYKDVVSFG-------------LLVLILLFRPS 297

Query: 338 SLLR 341
            LL 
Sbjct: 298 GLLG 301


>gi|283850318|ref|ZP_06367607.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
 gi|283574344|gb|EFC22315.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
          Length = 294

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 56/304 (18%), Positives = 106/304 (34%), Gaps = 21/304 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     LIY + A G ++V G + L++      Y +GA+   +     GL + L + +
Sbjct: 6   LVNGFTLGLIYALIAVGYTMVYGVIELINFAHGEIYMLGAFLT-LSFISLGLPLPLAVLL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + + A G+++ + + +   D   +A LI +      L     I  G         L F
Sbjct: 65  AMLATAAIGVLLDIIAYRPLRDAPRLAALITAIGMSIFLQNLAMIIWGSR------PLPF 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +         S V        + +    L   + L + RT    A R +  NQ 
Sbjct: 119 PKQALPAFFSDPAVTFSDVTISWMQVSIYVVALLLMLGLNLIITRTRTGTAMRALAQNQT 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S    +AG   +   + + P M   +  +   +  +LGG+
Sbjct: 179 AAALMGINVNRVISFTFALGSGMGAVAGIMVSMYYNTMYPTMGYLA-GVKAFAAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L     L  G                +     +    + LVI+ R   
Sbjct: 238 GSVPGAMLGGVVLGIAETLGAGYIS-------------SPYRDGVAYAVMILVIIFRPSG 284

Query: 339 LLRL 342
           LL  
Sbjct: 285 LLGR 288


>gi|120611831|ref|YP_971509.1| inner-membrane translocator [Acidovorax citrulli AAC00-1]
 gi|120590295|gb|ABM33735.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 336

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 60/278 (21%), Positives = 122/278 (43%), Gaps = 14/278 (5%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
             +     + +   +  +IL++ + A  L++++G  G++S        +GAY+  IL   
Sbjct: 37  PTIAQALDEGFYIGVASRILVFALAATSLNLILGFGGMVSFGHAAFVGVGAYAVGILMQE 96

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
              S W+  P +         ++GL SL+ +G Y  + TL  +++   +++  K    G+
Sbjct: 97  GIASAWIAWPAAIAAGALFAFVIGLVSLRTQGVYFIMITLAFAQMLFYLMVSLKA-YGGE 155

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
            G+ +A R                 P   +  +   YY +L +C L    +  L      
Sbjct: 156 DGLSLASRSQVG-------------PWLDLADDARFYYCVLAICVLVFIGLARLLNARFG 202

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
           +A + IR+N+    +L   +   KL+AF ++ A  G+AGA  A     +SP   ++S++ 
Sbjct: 203 HALQGIRENETRMAALGFPVYRTKLAAFTLAGAIAGLAGALLANQAGFVSPAALQWSQSG 262

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           +++ +VILGG+  L          + + E+      ++
Sbjct: 263 MLMVMVILGGVGRLYGGFVGAVAFLLIEEVLAAHTMHW 300


>gi|91787290|ref|YP_548242.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91696515|gb|ABE43344.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas sp. JS666]
          Length = 377

 Score = 78.4 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/355 (13%), Positives = 99/355 (27%), Gaps = 37/355 (10%)

Query: 11  YDKILCLLAVVYPLLLFLFLGA-----TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +   +  L  V  +   L L            Y  ++  +I+ Y + A  + ++ G  G+
Sbjct: 27  WSAFMIALIAVCAVAPVLNLWVPQGSMFHMSTYAVALLGKIMCYAICALAMDLIWGYTGI 86

Query: 66  LSLNCVIAYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIM 110
           LSL   + +A+G Y+  +                        W ++P     S +    +
Sbjct: 87  LSLGHGVFFALGGYAMGMYLMRQIGRDGNYKSDLPDFMVFLDWKVLPWHWTFSDSFVATL 146

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
            L                     + +           A + +  R             F 
Sbjct: 147 ILIVAVPGLVAFVFGYFAFRSRIKGVYFSIITQAMTFAAMLLFFRNETGFGGNNGFTDFK 206

Query: 171 RFPSSFVIYEIFMYYVLLGM---CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
           R  +  +        + +              WL  +      + IRD +          
Sbjct: 207 RILNIPLATPSMRMVLFVLTGLTLLGFFLFAKWLVGSKFGRVLQAIRDAETRVMFSGYNP 266

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
           +  KL+ + +S+   G+AGA +      I+P     + +I +     +GG  SL      
Sbjct: 267 LGYKLTIWVISAVMCGVAGALYVPQVGIINPGEMSPANSIEIAIWAAVGGRASLIGPIVG 326

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             I+ G                     ++       +      V L   + ++ L
Sbjct: 327 AFIVNGAKSWLT--------------VAYPEFWLYFLGALFIGVTLFLPNGVVGL 367


>gi|254453759|ref|ZP_05067196.1| urea ABC transporter, permease protein UrtC [Octadecabacter
           antarcticus 238]
 gi|198268165|gb|EDY92435.1| urea ABC transporter, permease protein UrtC [Octadecabacter
           antarcticus 238]
          Length = 410

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/364 (13%), Positives = 103/364 (28%), Gaps = 37/364 (10%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
            +   L +  +    +         S  ++ ++G + L   + A  + +V G  G+LSL 
Sbjct: 14  WFLAGLAIFTLGVTFMSEAAGVDMISTSFLKTLG-KTLCLCLVAIAMDVVWGYCGILSLG 72

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLL-------------------------------IPV 98
               + IG YS  +          +                                 P 
Sbjct: 73  HFAFFGIGGYSIGMWLMYARTEGIVATSLESAALPPTPQEITDAIGSQIFGVVGSSDFPA 132

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               S +  + +    L      L    L        + +         A      +   
Sbjct: 133 LWAFSHSLPLQLLAVVLAPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLYFFQNDT 192

Query: 159 LGTTVRSLIRFFRFPS----SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                  L      P        +  ++ ++       +   +  ++      +  R IR
Sbjct: 193 GLRGNNGLSGLQNIPGLEARGQAVVSLWFFWASALALGMGYVLFAYVVSGKFGSVIRAIR 252

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           DN+     L   +   KL  F +++   G+AGA +      I+P       +I +   V 
Sbjct: 253 DNEARVRFLGYHVEHYKLFIFTLTAMVAGVAGALYYPQAGIINPTEIAPIASIYLAVWVA 312

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +GG   L       A++  +     G +    N    ++  +      L+ ++  LV L 
Sbjct: 313 IGGRGRLYGAVIGAALVSLMSSWFTGGSAPNINLGF-YEIKWTDWWLVLLGVSFVLVTLY 371

Query: 335 RSHS 338
               
Sbjct: 372 FPKG 375


>gi|163845492|ref|YP_001623147.1| hypothetical protein BSUIS_B1406 [Brucella suis ATCC 23445]
 gi|163676215|gb|ABY40325.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 570

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91
               KY   +   + I  +    L +V G  G++SL  +    +GA+ +  +        
Sbjct: 24  LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + + + +  + +   G+ +GLP+L+ RG  LAI TL  +  F  +L              
Sbjct: 84  LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 133

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                       +   +  +L    + A ++ ++  + +  +W 
Sbjct: 134 ----------FPGQTSFTQVARPDLFASDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R +++A  +   +I  AKLSAFA+S+   G++G   A     +  + F   +++ + +
Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  + G            +++   EL   +N       + F       
Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291


>gi|254248178|ref|ZP_04941498.1| Branched-chain amino acid ABC-type transport system, permease
           component [Burkholderia cenocepacia PC184]
 gi|124874679|gb|EAY64669.1| Branched-chain amino acid ABC-type transport system, permease
           component [Burkholderia cenocepacia PC184]
          Length = 314

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 89/305 (29%), Gaps = 17/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++   GL+++ G +G++++       IGAY+  +           L PV    
Sbjct: 27  LSLFSVLLLMGLGLAVIFGQMGVINMAHGEFMTIGAYTVYLFSWFSQNVWHALTPVYFFF 86

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +      +   +       L     +       +L  W      +           +   
Sbjct: 87  AIVAAFALAFAAGWLAEWAL--IRHLYKRPLDTLLATWGLSLGMQQVFRSTFGPKEVSPA 144

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P+  +   +   +V+     ++  ++L L R+      R    N+    +
Sbjct: 145 LPDWLMGSWEPTPGLDIPVSGMFVMGLALLMTGGLLLALYRSRWGLRVRATVANRPMANA 204

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     G+AGA F A     +         +    +V  GG  SL 
Sbjct: 205 AGINTRRTDRMTFAIGCGIAGVAGAAFTAIGS--TGPTSGSLYIVDSFLVVTFGGAASLL 262

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +  +  +                         L ++ + +++++R   L   
Sbjct: 263 GTVASAFGIAQMQSISEFFLS-------------GSIARVLTLLTVVVILMLRPQGLFAS 309

Query: 343 RTPSN 347
           +    
Sbjct: 310 KVRRV 314


>gi|229004724|ref|ZP_04162460.1| Branched chain amino acid ABC transporter, permease [Bacillus
           mycoides Rock1-4]
 gi|228756517|gb|EEM05826.1| Branched chain amino acid ABC transporter, permease [Bacillus
           mycoides Rock1-4]
          Length = 287

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 107/292 (36%), Gaps = 31/292 (10%)

Query: 54  WGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLIPVSAMISGACGMIM 110
               I++G  G++S    + + IGAY   +          S  + I ++ ++S     I+
Sbjct: 1   MSFDILLGYTGIVSFGHCMFFGIGAYCVALLLDRQEVSIASFLIGIGIAVVLSAIISYII 60

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
           G+ SL+ +  + A+ TL +S++F  +  KW+  T+G  G        F            
Sbjct: 61  GMLSLRLKSHFYAMLTLAISQLFFVLAEKWRSFTHGGDGFTFRVPDMFRDRF-------- 112

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                        YY+ L    +   ++    +++I    + I  N++   +L   I+  
Sbjct: 113 -----------TFYYITLICLVVIFLLLRLFTQSSIGKVLKAISQNEQRVEALGYKILHY 161

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           K+ A  V+     ++G  F  +   ++  +F     +  + + ++GG+ +L        I
Sbjct: 162 KIIASIVAGVVAALSGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGVGTLVGAIAGAGI 221

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +  +      +                 R T  + +   +V+L     L   
Sbjct: 222 IEFLKYYLSELAA---------QYPIFERWTIFLGLLYIIVLLGFPTGLTGT 264


>gi|144897498|emb|CAM74362.1| ABC-type branched-chain amino acid transport system, permease
           component [Magnetospirillum gryphiswaldense MSR-1]
          Length = 324

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 119/301 (39%), Gaps = 26/301 (8%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
             R   +  IL +LA+  P  ++                ++ L + +FA   ++++G +G
Sbjct: 16  PSRQTIFVGILLVLALAAPFAVYPVF------------LMKGLCFALFAAAFNLMLGYVG 63

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           LLS    + +   AY        +GL+  + I +    +   G ++G  +++ +G Y A+
Sbjct: 64  LLSFGHAMFFGWSAYITAHAAKEWGLTPEIAILLGTFCAAGLGAVVGWLAIRRQGIYFAM 123

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL ++++   + ++                       ++ + R   F    +   + MY
Sbjct: 124 ITLALAQLMYFVALQA--------------PFTHGEDGIQGVPRGHLFGLIDLSDTMNMY 169

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y +L +  L+   +  +  +      + IRDN+    SL   +   KL AF +S+   GM
Sbjct: 170 YFVLAVFVLAILFLYRVVHSPFGQVLKAIRDNEPRAISLGYQVHRYKLIAFIISAGLSGM 229

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG+  +      S     +  +  V+ + +LGG+ ++        +++ +         +
Sbjct: 230 AGSVKSLVFQLASLADVHWHASGEVVLMTLLGGVGTIFGPTAGAYLVVTIQNYFASAGSW 289

Query: 305 Y 305
            
Sbjct: 290 V 290


>gi|262203721|ref|YP_003274929.1| ABC transporter-like protein [Gordonia bronchialis DSM 43247]
 gi|262087068|gb|ACY23036.1| ABC transporter related protein [Gordonia bronchialis DSM 43247]
          Length = 924

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 63/334 (18%), Positives = 126/334 (37%), Gaps = 18/334 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L +  +   L A     L+   L    +        I  +I+ + A    +V G  G +S
Sbjct: 316 LGRSPRPRHLFAGTIIGLVIGVLALLATTGSARLAVILTIIFAVIALSQVVVTGYAGQVS 375

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L  +    +GAY+     +  G+   +   ++A+++   G+++GLP+L+ RG  L +ATL
Sbjct: 376 LAQLTLAGVGAYALSRFTADLGVPFPVAPLLAALVALVVGVVIGLPALRVRGLPLMVATL 435

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++   +    +   +  G  G  V     F               +      I    V 
Sbjct: 436 ALAVFCEAFWFRNPSVNGGLQGAPVDSPSIFGVD--------LGIGAGEGYPRIAFGIVC 487

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +  L+A  +  LRR+    +   +R N+++  +    +   KL AFA ++   G+ G+
Sbjct: 488 LVVLALAALAVAALRRSRYGASMLAVRANERSAAAAGINVGVTKLVAFAAAAFLAGLGGS 547

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A  +   +   +     + + ++  + G+TS+S    A  +                 
Sbjct: 548 LLAYQQTLATAGSYAVFAGLALFAVFFVAGVTSVSGALLAGLL----------APGGVLY 597

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            L     SF   +  +  I L L ++     L+ 
Sbjct: 598 YLSDRFGSFGDYYLLISGILLVLTVITSPDGLIG 631



 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/308 (10%), Positives = 80/308 (25%), Gaps = 29/308 (9%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW--- 93
            +         +Y      L +   S G+++          AY+Y  L     L      
Sbjct: 6   AFFLLGLGNGAVYAALGLALVMTFKSSGVVNFATGAVALYAAYTYAFLRQGVLLHPIPGF 65

Query: 94  -------------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                          +  + +I+   G+++ L   +       +A  + S     ++   
Sbjct: 66  DARIDLGGRLGVGPALAGAVVIASVLGILLYLIVFRPMRSAPVLAKAVASIGLMLVIQAL 125

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +  G     V                   F            ++   +  L+    L 
Sbjct: 126 LALRVGADAPTVGPIFA-----------PQSFRVGDATVPTDRIWLAAVVVGLAVCAGLV 174

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           LR T    A     +++K       +     +S +A+SS    + G   A         +
Sbjct: 175 LRYTRFGVATEAAAESEKGALLTGLSPDRIAISNWALSSGTAAIGGVVIAPIVPL--NPV 232

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
                 +  ++  ++G   S++    A  ++  +      +                   
Sbjct: 233 AYSMFIVPALAAALVGNFASIALTVSAGLVIGMLQAEATNLQSLVDWMPDAGLAEAIPLV 292

Query: 321 TTLMVIAL 328
             +  + +
Sbjct: 293 LIIGFLLI 300


>gi|240144010|ref|ZP_04742611.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Roseburia intestinalis L1-82]
 gi|257204046|gb|EEV02331.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Roseburia intestinalis L1-82]
 gi|291534911|emb|CBL08023.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           (TC 3.A.1.4.-) [Roseburia intestinalis M50/1]
          Length = 293

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 101/305 (33%), Gaps = 23/305 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      +Y + A G ++V G   +L+        IG Y   +  +  G    + +
Sbjct: 5   SYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGCYVVFLAMNGQGWPPLVAV 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +S ++    G+++   + K       +A LI +      L     +  G       + +
Sbjct: 65  VLSVIVCTVLGIVIEKIAYKPLRRATPLAVLITAIGVSYFLQNAALLLFGADTKSFTNVV 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +             +         +L    + A +++++++T    A   + ++
Sbjct: 125 TLPSLKLAG---------GSLTISGTTIVTVLACVIIMAGLMIFIKKTKAGQAMLAVSED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ S    +AG  F ++   ++P        I   +  + G
Sbjct: 176 KDAAQLMGVNVNATISLTFAIGSGLAAIAGVLFCSAYPTLTPYT-GSMPGIKAFTAAVFG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+                  G        +L      +     ++   L +V+L++ 
Sbjct: 235 GIGSI-------------PGALIGGILLGIIEILGRAYISSQLSDAIVFAVLIIVLLVKP 281

Query: 337 HSLLR 341
             +L 
Sbjct: 282 TGILG 286


>gi|170747854|ref|YP_001754114.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
 gi|170654376|gb|ACB23431.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
          Length = 344

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 72/317 (22%), Positives = 128/317 (40%), Gaps = 18/317 (5%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSR 87
            +  T +    +++    L   +   GL+++ G  GLLSL      A+GAY+   +    
Sbjct: 30  IVPLTGTSYVFEALLTPFLALALAGLGLNLLTGYAGLLSLGSAAFMAVGAYAAFNLSLRL 89

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI-TNG 146
            GL + + + ++ +++   G++ GLP+L+ RG YLA++TL         L +   I  + 
Sbjct: 90  PGLPLPVSLLLAGLVAALAGLVAGLPALRLRGFYLAVSTLAAQFFVAWALNRIGWISDDS 149

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+  A RL   G +                     Y   L +  L   +   L  +  
Sbjct: 150 PSGVITAPRLVVAGLSFDD--------------PRGRYLFSLSVVTLLTVLAWRLAASPT 195

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSE 265
                 IRDN+ A   +   +   KL AFAVSS  IG+AGA +A A    + P  F    
Sbjct: 196 GRDLVAIRDNETAARLVGVKVARTKLLAFAVSSFVIGIAGALWAFAYLRTVEPAGFNLDR 255

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           +  ++ IVI+GG+ +L         ++ +  L   +             +  M    ++ 
Sbjct: 256 SFQILFIVIIGGLGTLRGAFLGAGFIVVLPLLLARLGAALLGDGFDSG-TLEMVQRIVLG 314

Query: 326 IALFLVILMRSHSLLRL 342
             +  V++     L  L
Sbjct: 315 ALIVAVLIREPAGLAAL 331


>gi|163743368|ref|ZP_02150748.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161383362|gb|EDQ07751.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
          Length = 400

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/363 (14%), Positives = 97/363 (26%), Gaps = 36/363 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L  +   LL   LG       +     + L   + A  + ++ G +G+LSL     +
Sbjct: 18  ILALFTLAVTLLSEGLGVGIVSTSLIKTLGKTLCLCLVAIAMDLIWGYVGILSLGHFAFF 77

Query: 75  AIGAYSYVILGSRYGLSIWL-------------------------------LIPVSAMIS 103
            +G Y   +          +                                 P+    +
Sbjct: 78  GLGGYMIGMWLMYERTRDTVLASLSDAVLPPTDTEIRDAVAHQIFGVVGGDSFPLVWAFA 137

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
            +  + + L         L    L        + +         A      +        
Sbjct: 138 DSLLLQLFLIVAVPGVLALTFGWLAFRSRVTGVYLSILTQAMTLALALYLFQNDSGLRGN 197

Query: 164 RSLIRFFRFPSSFVI----YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
             L      P    +      I+ ++       L   I  W       +  R IRDN+  
Sbjct: 198 NGLSGLQNLPGLADVPQSLISIWFFWGSALALGLGYVIAAWAVSGKFGSVLRAIRDNETR 257

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L  ++   KL  F  ++   G+AGA +      I+P       +I +   V +GG  
Sbjct: 258 VRFLGYSVEGYKLVMFTGTACVAGIAGALYYPQAGIINPAEMAPIASIYLAVWVAIGGRG 317

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
            L         +  +     G        L  F   +      ++ +   LV L     +
Sbjct: 318 RLYGAVIGAVFVSLLSSWFTG-GQAPDVDLGLFTIRWVDWWQVVLGLGFVLVTLFAPKGI 376

Query: 340 LRL 342
             L
Sbjct: 377 GGL 379


>gi|83719219|ref|YP_443167.1| branched-chain amino acid ABC transporter permease/ATP binding
           protein [Burkholderia thailandensis E264]
 gi|257139397|ref|ZP_05587659.1| branched-chain amino acid ABC transporter, permease/ATP binding
           protein, putative [Burkholderia thailandensis E264]
 gi|83653044|gb|ABC37107.1| branched-chain amino acid ABC transporter, permease/ATP binding
           protein, putative [Burkholderia thailandensis E264]
          Length = 741

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/322 (14%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            L+ +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 14  ALSWLALVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 73

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+     +   A G + G  + +  G   A+ TL + E+    
Sbjct: 74  GAFVAAHGFNRYGLPLPLVPLAGGVAGAAFGALFGFVATRRAGTAFAMITLGLGELVAAA 133

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                     +      +  Y ++   C  +A 
Sbjct: 134 AWSVPDWFGGAGGVSI------------DRAAGPALAAWDFGKPMHAYALIAVWCVAAAV 181

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT  +     +RDN     +L T     + +    ++ F G++GA      +  
Sbjct: 182 AMRVLVRTPFARLANAVRDNPARVAALGTDPRRVRYAMAIAAAFFAGVSGALTLIDVEVA 241

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 242 TSESVGMLRSGAVLFATVIGGATAFFGPVVGAVLLTFFSVFVASVSRAW----------- 290

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 291 ----LLYLGLLFVAVVLAAPGG 308


>gi|323357254|ref|YP_004223650.1| branched-chain amino acid ABC transporter, permease components
           [Microbacterium testaceum StLB037]
 gi|323273625|dbj|BAJ73770.1| branched-chain amino acid ABC-type transport system, permease
           components [Microbacterium testaceum StLB037]
          Length = 412

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 88/290 (30%), Gaps = 26/290 (8%)

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL-PSL 115
           S++ G+ G+ +        +G     +  +  GL+I++   +  +I  A G    +    
Sbjct: 146 SLIYGTTGISNFAHGEMVTLGGLLAYLFANVLGLNIFVAGIIVVVICAAFGYFQDVGIWK 205

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
             R   L++  L++  I  ++ +++       A                           
Sbjct: 206 PLRKRRLSLTQLMIVTIGMSLALQYTFQFFIGASTVRI-----------VTANPIPVRLG 254

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
            V   +     +     +   + L+L +T +  A R + DN     +    +       +
Sbjct: 255 PVSLSVDSLVAMAIAVVVLIGVGLFLLKTRVGRATRAVSDNPALAAASGINVDGVVRLIW 314

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
             ++A  G++G       + ++  M      +++ S V LGG+ +         I+   V
Sbjct: 315 TTAAALAGLSGILLGLVLNGVNW-MTGMQLLLLLFSAVTLGGLGTAFGALFGALIIGMTV 373

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           EL        F           +                R   L   +  
Sbjct: 374 ELTNIWLPGDFKYATALVLLILLLLV-------------RPQGLFGRKER 410


>gi|311693989|gb|ADP96862.1| inner-membrane translocator [marine bacterium HP15]
          Length = 318

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 56/326 (17%), Positives = 117/326 (35%), Gaps = 26/326 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++   + ++        ++  +       ILI  +F   L  +VG +GL++L   + Y +
Sbjct: 10  IVLAFFFIIALCIPLFLEANSFFVGKTTTILILSVFVMSLDFLVGRVGLVTLGHALFYGL 69

Query: 77  GAYSYVILGSRYG-LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           G Y +V+L   Y  ++ W+       IS    +++G+ +L+  G Y  + TL +S++   
Sbjct: 70  GGYLFVLLTPEYEAVNFWVYAIYIMGISALVALVVGVVALRTSGIYFIMITLAISQMVYY 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                                  L   ++     F      +      YY+ L    ++ 
Sbjct: 130 FFFDSLEFGG----------DDGLFIFMKPETSIFGLSFLDLDNPAHFYYLALLAVLITL 179

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             I  +  +         R N +   +L   I   +L ++ + S     AG  FA     
Sbjct: 180 VAIKIILHSRFGRIVEASRLNPERTEALGYNIFAFRLISYIIGSTLAAYAGLLFALQYGY 239

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P    +  +   + + ILGGM ++      T    G++ +   M+  +          
Sbjct: 240 VNPQFLTWEMSGTALVMSILGGMGTIYGAILGTITYEGLLFIFEHMSDDW---------- 289

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                   M  A+ L++L+    L  
Sbjct: 290 -----MLFMGGAIILMVLLLRKGLAG 310


>gi|257462892|ref|ZP_05627298.1| branched chain amino acid ABC transporter permease [Fusobacterium
           sp. D12]
 gi|317060515|ref|ZP_07925000.1| branched-chain amino acid transport system permease livH
           [Fusobacterium sp. D12]
 gi|313686191|gb|EFS23026.1| branched-chain amino acid transport system permease livH
           [Fusobacterium sp. D12]
          Length = 294

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 93/306 (30%), Gaps = 28/306 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLL 95
           I +      IY + + G ++V G   L++        +GAY+ +     +      IW  
Sbjct: 7   IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMVGAYTSLFSIPIFQKMGFPIWAT 66

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           I  + +I    GM+    + +   +   I+ LI +      L                  
Sbjct: 67  IFPAMIICALLGMLTEKIAYRPLRNSPRISNLITAIGVSLFLENIFMKLFTPNTRAFPKV 126

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                  +  +   +    +           +L    LS  +  +++ T    A     +
Sbjct: 127 FSHTSIQIFGVSFNYGSMVT-----------ILLTLALSIGLHFFMKNTKYGKAMLATSE 175

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   +   +       FA+ SA   +A   + ++  ++ P M      I      +L
Sbjct: 176 DYGAATLVGINVNLTIQLTFAIGSALAAIASVLYVSAYPQVQPLM-GSMLGIKAFIAAVL 234

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  L        IL  +  L              F               L +V+L++
Sbjct: 235 GGIGILPGAVIGGFILGIIESLTRAYLSSQLADAFVFG-------------ILIVVLLVK 281

Query: 336 SHSLLR 341
              +L 
Sbjct: 282 PTGILG 287


>gi|170740176|ref|YP_001768831.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168194450|gb|ACA16397.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 290

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 89/304 (29%), Gaps = 26/304 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +   +Y + A GL++V G L +++           ++     +   +  +L +   
Sbjct: 12  LNGLMTGAVYALIALGLTLVYGVLHIINFAHGALLTCAMFAVWGASATAHVDPYLALIAV 71

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             +    G  +    +           L+++     +L                      
Sbjct: 72  VPLMFGLGYGLQRLVIGPASHGSDDNVLLVTLGLSIVLENALL-----------AAFRSD 120

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              + S           ++        L G   ++  + L L RT    A R +   +  
Sbjct: 121 TRAIESDAALQVVEVGPLLLSTPRLIGLAGSLVVTGLLWLLLNRTDTGRAIRAVSREKLG 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +       F +  A +G+A      +           +  ++  +IV+LGGM 
Sbjct: 181 ARLVGIEVDHVYAVTFGLGCACLGVAACLLMPTYYV--NPRSGAAFVLVAFTIVVLGGMG 238

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S++       ++  V      +       +              + +   LV+L+R   L
Sbjct: 239 SITGALVGGLVIGVVESFSGLILGDSLGQIG-------------IFLIFILVLLVRPTGL 285

Query: 340 LRLR 343
              R
Sbjct: 286 FGAR 289


>gi|227823058|ref|YP_002827030.1| putative transmembrane component of ABC transporter [Sinorhizobium
           fredii NGR234]
 gi|227342059|gb|ACP26277.1| putative transmembrane component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 300

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 101/313 (32%), Gaps = 35/313 (11%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89
           + +      IY M A G ++V G +G+++      + +G +         +  + G    
Sbjct: 8   LVNGLTLGSIYGMIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLILTTFMAGVPVV 67

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L++ L++ V  + +      +   + +       +A LI +     +L  +  +T G   
Sbjct: 68  LALLLMMVVGMLTAALWNWTIERVAYRPLRGSFRLAPLITAIGMSIVLSNFIQVTQGPRN 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             +   +  +                 +   +    +++    L +     + RT +  A
Sbjct: 128 KPIPPLVSSVYDLF------------GITVSLKQIIIVVITAVLLSVFWYIVNRTPLGRA 175

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    + K    L   +       F + +A   +AG  +      +      F+  +  
Sbjct: 176 QRATEQDSKMAALLGVDVDRTISVTFIMGAALAAVAGTMYLMYYGVVVFTD-GFAPGVKA 234

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +  L        +  +  F               L 
Sbjct: 235 FTAAVLGGIGSLPGAVLGGLLIGLIESLWSAYFTIDYKDVATFS-------------ILA 281

Query: 330 LVILMRSHSLLRL 342
           +V++ +   +L  
Sbjct: 282 IVLIFKPSGILGR 294


>gi|33596710|ref|NP_884353.1| putative high-affinity branched-chain amino acid transporter
           membrane protein [Bordetella parapertussis 12822]
 gi|33600476|ref|NP_888036.1| putative high-affinity branched-chain amino acid transporter
           membrane protein [Bordetella bronchiseptica RB50]
 gi|33568075|emb|CAE31988.1| Putative high-affinity branched-chain amino acid transporter
           membrane protein [Bordetella bronchiseptica RB50]
 gi|33573411|emb|CAE37395.1| Putative high-affinity branched-chain amino acid transporter
           membrane protein [Bordetella parapertussis]
          Length = 315

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 55/309 (17%), Positives = 109/309 (35%), Gaps = 38/309 (12%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                  +   GI  L+  + A G +I+ G  G  S    + Y +G+Y   I   ++ L 
Sbjct: 20  PWYGSDVMVQFGINTLLLAVLAQGWNIIGGYTGYASFGNSVFYGLGSYGVAIAMVQWELP 79

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
               +     ++ A  +++G+P L+ RG Y AIATL ++++   I+   +          
Sbjct: 80  FAAGLVFGVALALAFALLLGMPVLRLRGHYFAIATLALAQVMTAIVSNIEL--------- 130

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                           +        +  +   Y + L +  L+   + WL R+       
Sbjct: 131 --------------AGQNIGLVLPPLNNDPLFYELSLALLALATLAVAWLTRSRFGFGLI 176

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVI 270
            IR+N++    +       K++AFA+S  F  +AG   A     + P+  F    N+ +I
Sbjct: 177 AIRENEEGAAVMGVNTTLYKVAAFALSGVFSALAGGIHAYWITFLDPESAFDIGLNVKMI 236

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            + + GG  ++         L  + EL                            + +  
Sbjct: 237 IMAVFGGAGTVLGPVVGAFSLSAISELLSS--------------EITSAAGLFFGVVIVA 282

Query: 331 VILMRSHSL 339
            +++    L
Sbjct: 283 AVVLMPRGL 291


>gi|188582809|ref|YP_001926254.1| urea ABC transporter permease [Methylobacterium populi BJ001]
 gi|179346307|gb|ACB81719.1| urea ABC transporter, permease protein UrtC [Methylobacterium
           populi BJ001]
          Length = 393

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/362 (12%), Positives = 101/362 (27%), Gaps = 36/362 (9%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           N + K +  ++++    + L +       +  ++  + L Y   A GL I  G  G+LSL
Sbjct: 21  NPFMKPIEWVSLLLLAGVILVVLPLMLDGFRLNLVGKYLTYAFVALGLVICWGYAGILSL 80

Query: 69  NCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
              + + +G Y   +                       +                   L 
Sbjct: 81  GQGVFFGLGGYCMAMYLKLEASSVENTKIQSTPGIPDFMDWNQITALPWFWQPFHSLPLT 140

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI--------- 167
                                 +            +A  L  L    +            
Sbjct: 141 LLLVVAVPVAFAFIISVAMFKRRVGGTYFAIITQAIAAILTILIVGQQGYTGGINGITDL 200

Query: 168 -RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                +       +  +Y+V  G+      +  +++++ +      +R+ +        +
Sbjct: 201 RTLHGWDIRQDSAKFILYFVNGGLLIGCILMAQYVKKSKLGRILVAMREKEDRVRFSGYS 260

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +   K+ AF +++AF  + GA F      +SP       ++ ++    +GG  SL     
Sbjct: 261 VAGFKVFAFCLAAAFAAIGGAMFTLQVGFMSPSFVGIVPSVEMVIYTAVGGRLSLFGAVW 320

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
            T ++                    F  SF       +      V+L+  + L  +    
Sbjct: 321 GTLLVNWAKT--------------SFSESFPDMWLFGLGALFIAVVLIFPNGLAGIWREH 366

Query: 347 NF 348
             
Sbjct: 367 IE 368


>gi|261312984|ref|ZP_05952181.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10]
 gi|261302010|gb|EEY05507.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10]
          Length = 289

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 53/310 (17%), Positives = 123/310 (39%), Gaps = 29/310 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  G+LS      +   AY        +G+S  L + +  +
Sbjct: 6   FLMKMLCFALFASAFNLLLGYTGILSFGHAAFFGGAAYVTAHAVKEWGVSPELGLVLGIL 65

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            + A G+++G  +++ +G Y  + TL ++++F    ++                      
Sbjct: 66  AAAALGLVIGYLAIRRQGIYSTMITLALAQMFFFFCLQASFTHG--------------ED 111

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R F F    +   + MYY +L +  L    I  +  +      +++R+N+    
Sbjct: 112 GLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLGVFAIWRITNSPFGMILKSVRENENRAI 171

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL  ++   KL+AF +S+   G+AG   A      +     +  +  VI + +LGG+ +L
Sbjct: 172 SLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQFATLTDVSWQMSGEVILMTLLGGIGTL 231

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  A ++ +       +F                 T +  +     +L+    ++ 
Sbjct: 232 IGPIVGAAFVVALQNWLATSDFPV---------------TIVTGLIFMACVLLFRKGIIG 276

Query: 342 LRTPSNFLER 351
               S   ++
Sbjct: 277 EFYASRIGKK 286


>gi|171058534|ref|YP_001790883.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
 gi|170775979|gb|ACB34118.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
          Length = 432

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/341 (14%), Positives = 115/341 (33%), Gaps = 32/341 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
            L ++   + L        L L         +  +M  Q+ I ++     ++++G  G+L
Sbjct: 6   PLKRHRGWIRLAMWGAYAALMLAAPLLWRSSFALTMLSQMGIAIIVCLAYNVLLGQGGML 65

Query: 67  SLNCVIAYAIGAYSYVIL-----GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           S    +   +GAY  +            L + L+             ++G  + +  G  
Sbjct: 66  SFGHAVYSGLGAYLAIHTLNRVAAGDLALPVSLVPLAGGAAGLLFAALLGYVTTRKAGTS 125

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
            A+ TL + E+  ++ +       G+ GI              + +            +I
Sbjct: 126 FAMITLGIGELVWSLALMLPEFFGGEGGIS------------ANRVVGPPVLGISFGPQI 173

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +Y+++   CF+  + +    RT +      +RDN +    +  +    +  AF VS  F
Sbjct: 174 ELYHLIAIYCFICTAALYAFTRTPLGRILNAVRDNPERVEFIGYSTRSVRWLAFMVSGLF 233

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+ G   A + + ++ ++   + +   +  V LGG            +++  + L   +
Sbjct: 234 AGIGGGLAALNFEIVTAEVLGAARSGAYLLFVFLGGAGFFVGPIIGAVLMVIALVLLSEL 293

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                                 + +   ++++     +  L
Sbjct: 294 ---------------TAAWLLYLGLVFVVMVVAAPGGIASL 319


>gi|152987585|ref|YP_001350958.1| branched chain amino acid ABC transporter permease [Pseudomonas
           aeruginosa PA7]
 gi|150962743|gb|ABR84768.1| probable permease of ABC branched chain amino acid transporter
           [Pseudomonas aeruginosa PA7]
          Length = 304

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 87/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P+
Sbjct: 9   MINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLSAIALALLAFFGLQNFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLLFTVLVTCTYGWVIERIAYKPLRNSTRLAPLISAIGMSLILQNYVQVAQGPRQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+      F     FV       ++L+      A +   +R T +    R  + ++K
Sbjct: 129 GIPTLLDGALKFHVGDGFVQLTYTKLFILVASLIGMAVLTYVIRCTRLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISYVFVIGAAMAALAGMLITMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        +L        GM    +  +  F               L L+++ R   
Sbjct: 248 GSLPGAMLGGLVLGVAEAQFSGMVNTDYKDVFAFS-------------LLVLILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|317402525|gb|EFV83092.1| hypothetical protein HMPREF0005_02325 [Achromobacter xylosoxidans
           C54]
          Length = 321

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 111/304 (36%), Gaps = 32/304 (10%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL---SIWLLIPV 98
             +++L + +FA   +++ G  GL+S      +    Y+   +   YG       L +  
Sbjct: 32  FVMKVLCFALFALAFNLLTGFTGLVSFGHAAFFGWAGYAAGEMMILYGAAGLPPELAMLC 91

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++ A G  +G  +++  G Y A+ TL +S++   + ++                   
Sbjct: 92  GVAMAAAIGYAIGWLAIRRTGIYFAMITLALSQVAYFMAVQVGWTRG------------- 138

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               ++ + R        +  +  MYY  LG+  L    +  +  +      +TIRDN  
Sbjct: 139 -EDGMQGIPRGKFLGLVDLSADTNMYYFALGVFVLGFLFVYRVIHSPFGQVLKTIRDNAP 197

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL       KL AF +S++  G+AG+  A     ++ +    + +  V+ + +LGG+
Sbjct: 198 RAISLGYDTDRCKLLAFVLSASVAGLAGSLKALVLQLVALNDVSLATSTEVLLMTLLGGI 257

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +++ +      +                   T ++ +   L +      
Sbjct: 258 GTVWGPVVGATLVVSLQNYLATLGDVV---------------TIVIGLIFVLCVSFFRRG 302

Query: 339 LLRL 342
            +  
Sbjct: 303 FVGE 306


>gi|193222437|emb|CAL63364.2| Putative ABC-type branched-chain amino acid transport system,
           permease component [Herminiimonas arsenicoxydans]
          Length = 316

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 101/313 (32%), Gaps = 8/313 (2%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
             +   +Y+ +  +  +IY M A G ++  G L ++  +      +GA++  +  S   L
Sbjct: 7   AMSVIGQYVFNGLMLGMIYAMVAVGFTLFFGVLDVIKFSHGDTLMVGAFA-GLTASTGVL 65

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + +  P   +++     +     L        +  L  +     +L      T  +  +
Sbjct: 66  MLDIGSPWIRLLAVVLAAVCVTGLLGAAIAKWLVLPLHKAPPLNTLLATLMLGTVMREAV 125

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +            SL+                  +LL    + A +   + RT +  A 
Sbjct: 126 RLFYPDGSNSQPFPSLLPTDAIEFGGFALRADNVILLLSGLAIIAGVHFLITRTRLGMAI 185

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +  + +    +        L  FA+ S    +AG       + I+ ++      +I  
Sbjct: 186 RAVAQDGETARLMGINFEAVVLLTFALGSGMAALAGVMNGLYYNEINFNV-GLLLGVIGF 244

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  ILGG+ ++        +  G+  L          ++       +          + +
Sbjct: 245 AAAILGGLGNIYGAIIGGFLFAGLQVLGSATLPALIPNI------PSAYKDVFAFAVVII 298

Query: 331 VILMRSHSLLRLR 343
           ++  +   L+  +
Sbjct: 299 LMAWKPTGLIAEK 311


>gi|170078700|ref|YP_001735338.1| permease protein of branched-chain amino acid ABC transporter
           [Synechococcus sp. PCC 7002]
 gi|169886369|gb|ACB00083.1| permease protein of branched-chain amino acid ABC transporter
           [Synechococcus sp. PCC 7002]
          Length = 316

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 102/318 (32%), Gaps = 27/318 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG----------SRY 88
           + +      +Y +FA G ++V   LG+++      + +GAY   +            ++ 
Sbjct: 10  LLNGLSIGSVYAIFALGYTLVFSILGIINFAHGAIFTLGAYFTYLFAGGQFGFNGFLAQV 69

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            L   L   ++ +I       + +         L +          + L     I NG  
Sbjct: 70  KLPFALPFGLALLIGCGFAGCVSMLVEWLAFRPLRLRGADPLLSLVSSLGAAVVIVNGIQ 129

Query: 149 GIYVADRLYFLGTTVRSLI--RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +  A+   F       L     F  P   ++       +L     +   +   + RT  
Sbjct: 130 LLVGAEIYTFPADIYGGLPESINFGSPERPILIRTVQLIILTVSALVVTLLTYGMTRTKF 189

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A + + ++      L           F VS A  G+AG    +S   I+   F  S  
Sbjct: 190 GKAIQAVAEDSTTASLLGINTEQVVRVTFFVSGALAGLAGTLVGSSV-SIAGPYFGISYG 248

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           +  + +++LGG+ ++        I+                        F+     +   
Sbjct: 249 LKGLGVIVLGGLGNIPGAVLGGLIIGMAEAFI--------------PADFSGYREAIAFA 294

Query: 327 ALFLVILMRSHSLLRLRT 344
            LF ++L+R   LL  +T
Sbjct: 295 LLFGMLLLRPQGLLGQKT 312


>gi|56696588|ref|YP_166947.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56678325|gb|AAV94991.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 409

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 51/366 (13%), Positives = 111/366 (30%), Gaps = 36/366 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +   L L  ++  +L         S  +I ++G + L   + A  + ++ G  G+LSL  
Sbjct: 15  FLAALALFTLIVSVLSEGLGTGIISTSFIKTLG-KTLCLCLIAVAMDLIWGFAGILSLGH 73

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLL-----------------IPVSAMISGACGMIMGLP 113
              + +G Y   +        + ++                    + +          L 
Sbjct: 74  FAFFGLGGYMIGMWLMYERTRLIVVESLSQSEIPPTEAEVIDAIGNQIFGVVGSSEFPLI 133

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY-----------------VADRL 156
                  +L +  +++      ++  W    +   G+Y                   D  
Sbjct: 134 WAFADSLFLQLLLVLLVPGLLALIFGWLAFRSRVTGVYLSILTQAMTLALALYLFQNDSG 193

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +  L       +S  +  ++  +       L   +  WL      +  R IRDN
Sbjct: 194 LRGNNGLSGLQNLPGVDASQDVVSLWFLWSSALALGLGYVLAAWLVSGKFGSVIRGIRDN 253

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +     L  ++   KL  F +++    +AGA +      ++P       +I +   V +G
Sbjct: 254 EARVRFLGYSVETYKLVIFTLTACIAAIAGALYYPQAGIVNPAEIAPIASIYLAVWVAIG 313

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G   L      TA +  +     G           +   +      L+ ++   V L+  
Sbjct: 314 GRGRLYGAVIGTAFVSLLSTWFTGGQAPDVPLGF-YTIKWVDWWLVLLGLSFVAVTLLAP 372

Query: 337 HSLLRL 342
             +  L
Sbjct: 373 KGMGGL 378


>gi|315655906|ref|ZP_07908804.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Mobiluncus curtisii ATCC
           51333]
 gi|315489970|gb|EFU79597.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Mobiluncus curtisii ATCC
           51333]
          Length = 294

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 101/303 (33%), Gaps = 23/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++        +GAY+         L  +  +  
Sbjct: 8   LINGLSLGSIYALIALGYTMVYGIIQLINFAHGDVLMVGAYAGFAGMVLLHLDPFTSLLA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I    GM++   + K       IA LI +     ++        G        +  +
Sbjct: 68  AMIICAILGMLIERLAYKPLRHSTRIAVLITAIGMSLLIEYVTMYFVGAEARAYPAQTGW 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L            +    V   +    +++    L   +   +++T I  A R +  +Q 
Sbjct: 128 LSA---------SYHFGGVNLSMIQIIIVVVSVILMVVLQFIIKKTRIGKAMRAVSQDQD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +  ++       FA+ SA  G AG  +      I+P M      +      +LGG+
Sbjct: 179 AAKLMGISVDNTISFTFALGSALAGAAGVLWGLYYTSITPLM-GIMPGLKAFVAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        ++  +  +   +    F     F             + L +V++ +   
Sbjct: 238 GLIPGALVGGYLVGLLETIVNSLGLSTFRDAAVF-------------LVLIIVLIFKPAG 284

Query: 339 LLR 341
           +L 
Sbjct: 285 ILG 287


>gi|298345500|ref|YP_003718187.1| branched subunit amino acid ABC transporter permease [Mobiluncus
           curtisii ATCC 43063]
 gi|298235561|gb|ADI66693.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Mobiluncus curtisii ATCC
           43063]
          Length = 294

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 102/303 (33%), Gaps = 23/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++        +GAY+         L  +  +  
Sbjct: 8   LINGLSLGSIYALIALGYTMVYGIIQLINFAHGDVLMVGAYAGFAGMVLLHLDPFTSLLA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I    GM++   + K       IA LI +     ++        G        +  +
Sbjct: 68  AMIICAILGMLIERLAYKPLRHSTRIAVLITAIGMSLLIEYVTMYFVGAEARAYPAQTGW 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           LG           +    V   +    +++    L   +   +++T I  A R +  +Q 
Sbjct: 128 LGA---------SYHFGGVNLSMIQIIIVVVSVILMVVLQFIIKKTRIGKAMRAVSQDQD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +  ++       FA+ SA  G AG  +      I+P M      +      +LGG+
Sbjct: 179 AAKLMGISVDNTISFTFALGSALAGAAGVLWGLYYTSITPLM-GIMPGLKAFVAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        ++  +  +   +    F     F             + L +V++ +   
Sbjct: 238 GLIPGALVGGYLVGLLETIVNSLGLSTFRDATVF-------------LVLIIVLIFKPAG 284

Query: 339 LLR 341
           +L 
Sbjct: 285 ILG 287


>gi|218782728|ref|YP_002434046.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218764112|gb|ACL06578.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 325

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 59/332 (17%), Positives = 116/332 (34%), Gaps = 26/332 (7%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            KI         L+  L            ++ I   I  +FA  L++++G  GLLS    
Sbjct: 2   TKIWIKTLAAIILIGVLIAFPKVMGVLNTNIFIGFAIMALFAVSLNLMLGYTGLLSFGHA 61

Query: 72  IAYAIGAYSYVILGSRYGLSIW-LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           + + +GAY+  +           + + +  + +  C +I+    ++  G   ++ TL   
Sbjct: 62  MFFGLGAYTTALSLKHIDNLPISMALLLGVLGAVVCAVIVSPLLVRLSGTAFSMLTLAFG 121

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           ++   + +K++ +T G  G+               +              +  YY  + +
Sbjct: 122 QLMYIVCLKFREVTGGADGLGGFPVPDLKIPFTGGIDM---------TDPVNFYYFAITV 172

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 +I    +T I +   +IRDN      L   +   K   F VS  F G AGA +A
Sbjct: 173 LGGCILLIWRFTKTPIGSVMISIRDNDNRVDYLGFHVPSVKSLVFIVSGGFAGAAGAIYA 232

Query: 251 ASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             ++ +S D       +   I + I+GG++S +                          L
Sbjct: 233 LFQNMVSTDGVLGLFTSFNPIIMTIIGGVSSFTGPIIGA---------------GLLTLL 277

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            +F   +  R      + L L+I      ++ 
Sbjct: 278 EEFLLRYTDRIALFNGLVLILMIKFAPGGIMG 309


>gi|116255605|ref|YP_771438.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115260253|emb|CAK03357.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 329

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 59/310 (19%), Positives = 122/310 (39%), Gaps = 29/310 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS      +   AY        +GL   L I +   
Sbjct: 42  FLMKLLCFALFACAFNLLLGYTGLLSFGHATFFGGAAYFTAYTVKEWGLPPELGILIGVA 101

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G++MG  +++ +G Y A+ TL +S++F    ++ +                    
Sbjct: 102 GAAFLGLVMGFFAIRRQGIYFAMITLALSQMFFFFCLQAEFTEG--------------ED 147

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++S+ R   F    +     MYY +L +  +   II     +      ++IR+N++   
Sbjct: 148 GIQSVPRGHLFGFIDLNSSTNMYYFVLAVFLVGILIIWRFINSPFGMILKSIRENEQRAI 207

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL  ++   KL AF +S+A  G+AGA  +      +     +  +  VI + +LGG+ +L
Sbjct: 208 SLGYSVARYKLGAFVMSAALAGLAGAVKSIVFQFATLTDVAWQMSGEVILMTLLGGIGTL 267

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +++ +        F                 T +  I   + +L+    ++ 
Sbjct: 268 IGPLFGAGLVVVLENYLATSEFPV---------------TIITGIVFMVCVLIFRRGIIG 312

Query: 342 LRTPSNFLER 351
               S    +
Sbjct: 313 EFYASRLGRK 322


>gi|282857802|ref|ZP_06267010.1| inner-membrane translocator [Pyramidobacter piscolens W5455]
 gi|282584363|gb|EFB89723.1| inner-membrane translocator [Pyramidobacter piscolens W5455]
          Length = 356

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 71/332 (21%), Positives = 138/332 (41%), Gaps = 23/332 (6%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +       L  +  ++L + +        +  M + I  Y++ A  L++VVG LG LSL
Sbjct: 12  ARRVYGTYALVTLAYVILQIMISTRTLSSSMKGMLVPICAYMVMAVVLNLVVGVLGELSL 71

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLL-------IPVSAMISGACGMIMGLPSLKFRGDY 121
                 ++GA++ V         + L        +   A  +   G ++G+P L+ +GDY
Sbjct: 72  GHAGFMSVGAFTGVACAILLQDLVPLAPLRLSVSMAAGAASAALAGFLIGIPVLRLKGDY 131

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LAI TL   EI +++L  +    +   G++ +      G      +          I +I
Sbjct: 132 LAIVTLAFGEIIKSVLNNFYMGVDKA-GLHFSMLSDKTGLAPGGRLIVGGPMGIGGIRKI 190

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +     +  ++  ++  L  + +  A++ +RD++ A  S+   +   K++AF VS+A 
Sbjct: 191 ATFGTGFALVMIALVVVYNLINSRLGRAFQAVRDDRIAAESVGIDVTRYKMTAFVVSAAL 250

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G AG  FA +   I  + F F+ +I+++  V+LGG  ++     A A L  + E     
Sbjct: 251 AGAAGCLFAMNYSTIVANKFDFNTSILILVFVVLGGQGNMLGSIVAAAALTILPEKLREF 310

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
             Y                  +  + L  ++L
Sbjct: 311 RDY---------------RMLIYAVLLIAIML 327


>gi|39936867|ref|NP_949143.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009]
 gi|192292696|ref|YP_001993301.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|39650724|emb|CAE29247.1| permease of ABC transporter,putatively for branched chain amino
           acuds [Rhodopseudomonas palustris CGA009]
 gi|192286445|gb|ACF02826.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 305

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 101/312 (32%), Gaps = 28/312 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGL 90
           + +  +   IY + A G ++V G +G+++      + IG +  +I          +   L
Sbjct: 8   LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLILVSFGLTFVPL 67

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + +++ VS  I+   G  +   + +       +A ++ +     +L+ +  ++ G    
Sbjct: 68  ILLVVLLVSMAITALYGWTVERIAYRPLRHSFRLAPMLSAIGMSFVLMNYAQVSQGARVK 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            V   +    T   S   F       V        V++    L       + +T +    
Sbjct: 128 PVPPIITGGYTLHESADGFN------VQLSNVQILVVVTTVVLLGIFTWLVAKTRLGRDM 181

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    +Q     L   +       F + +A   +AG  +      I   M  F   I   
Sbjct: 182 RACEQDQTMAALLGVDVDRTISMTFVIGAALASVAGMMYLLYYGLIDFFM-GFIAGIKAF 240

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ SL        ++  +           +  +  F               L +
Sbjct: 241 TAAVLGGIGSLPGAMLGGLLIGLIETFWSAYFSVEYKDVAAFS-------------ILII 287

Query: 331 VILMRSHSLLRL 342
           V++     LL  
Sbjct: 288 VLIFMPTGLLGR 299


>gi|90420353|ref|ZP_01228261.1| urea short-chain amide or branched-chain amino acid uptake, UrtC,
           ABC permease component [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335687|gb|EAS49437.1| urea short-chain amide or branched-chain amino acid uptake, UrtC,
           ABC permease component [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 387

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/349 (14%), Positives = 97/349 (27%), Gaps = 33/349 (9%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            +   + V    L            Y   +  + + Y + A  L +V G +G+LSL    
Sbjct: 18  ILAAAILVPMANLWLPASHPLHVPSYAVPLFGKYVCYALLALALDLVWGYVGILSLGHGA 77

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            +A+G Y+  +   R   S  +                 LP   +  D    A L++   
Sbjct: 78  FFALGGYAMGMYLMRQIGSRGVYGDPVLPDFMVFLNWQELPWYWYGFDQFWFAALMVVLA 137

Query: 133 FQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFP 173
              +   +                             +  D  +     +        F 
Sbjct: 138 PGILAFVFGYFAFRSRVTGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKELLGFS 197

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
                    ++        ++  I+ W+ R+ +      +RD +     +       KL 
Sbjct: 198 LQADTTRAGLFAASCIALAVAVVIVGWITRSRLGKLMVAVRDAESRTRFIGWRPEHVKLF 257

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
           AF VS+   G+AGA +      I+P  F    +I ++    +GG  +L        ++  
Sbjct: 258 AFTVSAVMAGIAGALYVPQVGIINPGEFAPVNSIEIVVWAAVGGRGTLIGPVIGALLVNF 317

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                             F          ++      V L     ++  
Sbjct: 318 --------------GKSTFTAIAPEFWLFVLGSLFVFVTLFLPRGIVGT 352


>gi|152981508|ref|YP_001352347.1| branched chain amino acid ABC transporter permease
           [Janthinobacterium sp. Marseille]
 gi|151281585|gb|ABR89995.1| Branched-chain amino acid ABC-type transport system, permease
           components [Janthinobacterium sp. Marseille]
          Length = 309

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 101/307 (32%), Gaps = 8/307 (2%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ +  +  +IY M A G ++  G L ++  +      +GA++  +  S   L + +  
Sbjct: 6   QYVFNGLMLGMIYAMVAVGFTLFFGVLDVIKFSHGDTLMVGAFA-GLTASTGVLMLDISS 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P   +++     +     L        I  L  +     +L      T  +  + +    
Sbjct: 65  PWIRLLAVVLSAVCVTGLLGAAIAKFLILPLHKAPPLNTLLATLMLGTVMRESVRLFYPD 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   SL+         +        +L+    + A +   + RT +  A R +  +
Sbjct: 125 GSNSKPFPSLLPTGSVDIGTLALRADNVILLISGLAIIAGVHFLITRTRLGMAIRAVAQD 184

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    +        L  FA+ S    +AG       + I+ ++      +I  S  ILG
Sbjct: 185 GETARLMGINFEAVVLLTFALGSGMAALAGVMNGLYYNEINFNV-GLLLGVIGFSAAILG 243

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++        +   +  L   +      ++       +          + +++  + 
Sbjct: 244 GLGNIYGAILGGFLFAALQVLGSALLPALIPNI------PSAYKDVFAFAVVIILMAWKP 297

Query: 337 HSLLRLR 343
             L+  +
Sbjct: 298 TGLIAEK 304


>gi|126450053|ref|YP_001080287.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei
           NCTC 10247]
 gi|126242923|gb|ABO06016.1| ABC transporter, permease/ATP-binding protein [Burkholderia mallei
           NCTC 10247]
          Length = 746

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 4   ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 64  GAFVAAHSFNRYGLLLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298


>gi|268590795|ref|ZP_06125016.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Providencia rettgeri DSM 1131]
 gi|291313574|gb|EFE54027.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Providencia rettgeri DSM 1131]
          Length = 308

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 87/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW-LLIP 97
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +    +   
Sbjct: 12  LLNGLTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAGLMMLGIDIGWI 71

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           + A    A  ++                      I     I           +    R  
Sbjct: 72  LVAAAFIAAIVVSSAYGWSIERVAYRPVRHSKRLIALISAIGMSIFLQNYVSLSQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + +                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLITGQWVLGESDGFEATVTKMQLTIWVVTVLAMLALTLFIRYSKMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     +        +  ++ F               L  V+L+   
Sbjct: 251 IGSIPGAMLGGLILGVAEAMTSAYLSTEYKDVVSFG-------------LLIGVLLIMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|113867533|ref|YP_726022.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
 gi|113526309|emb|CAJ92654.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
          Length = 437

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/338 (15%), Positives = 118/338 (34%), Gaps = 32/338 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +   +     +L+ L L    +  +  ++  Q+ I ++FA   ++++G  G+LS  
Sbjct: 21  RPLNLARWIIWSLTVLVMLVLPLIFTGGFAITLMSQMGIMIIFALSYNMLLGQTGMLSFG 80

Query: 70  CVIAYAIGAYS-----YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
             +   +GA+       ++   +  L + +L  V  +     G+I G  + K  G   A+
Sbjct: 81  HAVYSGLGAFIAVHVLNMVGAGKVWLPVSMLPLVGGLAGAFFGVIFGYVTTKKSGTTFAM 140

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            T+ + E+     + +     G+ GI              + +    F          +Y
Sbjct: 141 ITMGIGEMVFASSLMFPEFFGGEGGIS------------TNRVVGDPFLGITFGPGRQVY 188

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y++   C LS   +    +T +      +RDN +    +       +     +S+ F G+
Sbjct: 189 YLIAAWCLLSMVAMYAWTQTPLGRIANAVRDNPERVEFIGYNTQRVRYLVLILSAFFAGI 248

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA  A + + +S +      +  V+  V +GG            + +        +   
Sbjct: 249 AGALGAINFEIVSAENVSAVRSGGVLLAVFIGGAGVFFGPIIGAVVFVLFAVALSDLTKA 308

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +                  + +   L+++     L  L
Sbjct: 309 W---------------LLYLGLFFVLMVMFVPGGLASL 331


>gi|33594578|ref|NP_882222.1| branched-chain amino acid transport system permease [Bordetella
           pertussis Tohama I]
 gi|33564654|emb|CAE43976.1| branched-chain amino acid transport system permease [Bordetella
           pertussis Tohama I]
 gi|332383989|gb|AEE68836.1| branched-chain amino acid transport system permease [Bordetella
           pertussis CS]
          Length = 320

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 68/301 (22%), Positives = 116/301 (38%), Gaps = 29/301 (9%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y+ ++ +   IY + A GLS++VG  G +SL       IGAY+  I   R+ +  W
Sbjct: 19  TGNAYLINLFVVCAIYALPAIGLSLLVGHCGQISLGHAAFVGIGAYAAAIASQRWDMDPW 78

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L +  +A ++ A    +G    + RG +LA+ATL +  I   +L++W  +T G  GI VA
Sbjct: 79  LAVLFAAALACAAAWAVGKLVFRLRGHHLAMATLALGMIVHTVLVEWHDVTGGPDGISVA 138

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             L      + S                  + +      ++  +   L R+    A R +
Sbjct: 139 GVLKVGSLELASDP--------------AFFVLGWLAVIVALILADNLIRSPFGLALRVV 184

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +++    S+       K      S A  G++G  +      ISPD F  + +I ++ IV
Sbjct: 185 GESELVAGSIGIAPARVKQLIMMASGALAGLSGGLYTFWTGYISPDPFNVALSIKLLLIV 244

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
            L G T   +       ++ V E                          L  + L L +L
Sbjct: 245 ALSGFTGTWRTLVGVFFVVLVSEGMKSF---------------GHLDVILYGLLLILTML 289

Query: 334 M 334
            
Sbjct: 290 F 290


>gi|261819468|ref|YP_003257574.1| branched-chain amino acid transporter permease subunit LivH
           [Pectobacterium wasabiae WPP163]
 gi|261603481|gb|ACX85967.1| inner-membrane translocator [Pectobacterium wasabiae WPP163]
          Length = 308

 Score = 78.0 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 96/312 (30%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +        
Sbjct: 12  MFNGLTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDTGWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              +    + +IS A G  +   + +       +  LI +      L  +  +  G    
Sbjct: 72  LISVAFIAAVVISSAYGWSIERVAYRPVRTSKRLIALISAIGMSIFLQNYVSLNQGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L + V                      + +       ++ L++R + +  A 
Sbjct: 129 ----RDVALPSLVTGQWVLGESNGFTATISTMQLTIWIVTFLAMLALTLFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L  +        F + +    +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGISTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +   + F               L +
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALTSAYLSTEYKDAVSF-------------ALLIV 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|322834880|ref|YP_004214907.1| inner-membrane translocator [Rahnella sp. Y9602]
 gi|321170081|gb|ADW75780.1| inner-membrane translocator [Rahnella sp. Y9602]
          Length = 308

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 82/290 (28%), Gaps = 2/290 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDASWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
                    +++                     +   I  I           +    R  
Sbjct: 72  LIGAGFIAAIVISSAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + V    +                 + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLVTGQWKLGETNGFAATISTMQLIIWVVTFVAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L  +        F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGISTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           + S+        IL     L        +  ++ F     +       I 
Sbjct: 251 IGSIPGAMIGGLILGVAEALTSAYLSTEYKDVVSFALLIVVLLVLPTGIL 300


>gi|170740508|ref|YP_001769163.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168194782|gb|ACA16729.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 281

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 61/305 (20%), Positives = 120/305 (39%), Gaps = 42/305 (13%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             S+   I +  + A  + +V+   G LSL       +GAY+  +L  + G+   + +  
Sbjct: 12  YQSLIHGIGVNGILALSIYVVLAV-GQLSLGQAAFMGVGAYTGALLTVKAGVPFPVAMAG 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A +     +++G P+L+  G YLAIAT+ + EI + + + W     G  G+        
Sbjct: 71  AAAVPALIALVVGGPTLRLTGVYLAIATIGLGEITRIVFLNWDY-AGGALGLSGIPEKGG 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G                          + G    +   ++ + R+ I  A   +R+++ 
Sbjct: 130 VG-------------------------AIYGTLAAALLALVLIARSRIGRAMEAMREDEA 164

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +   +++A  VSSA  G+AG   A     I P+ + F   + ++S  +LGG+
Sbjct: 165 AAGVMGVNLPRYRMTALVVSSALAGLAGCLSAHVSSFIGPNEYGFETAVTILSYALLGGI 224

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S        AIL  + E+   +  +                  +  + + L +L     
Sbjct: 225 GSPVAPVLGAAILTLLPEVLRPLADF---------------RLMVNGLIIVLAVLFMPRG 269

Query: 339 LLRLR 343
           +L  R
Sbjct: 270 ILPWR 274


>gi|161523267|ref|YP_001578279.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
 gi|160340696|gb|ABX13782.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
          Length = 324

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 57/324 (17%), Positives = 133/324 (41%), Gaps = 16/324 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+Y +LL   L A     Y   +  ++L + +FA   ++++G  GLLS    +  A   Y
Sbjct: 5   VLYGVLLAALLVAPFVGAYPVFVM-KVLAFALFAAAFNLLIGYTGLLSFGHAMFLATAGY 63

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +        G +  L +     I+   G+++GL +++ +G Y A+ TL  +++   I ++
Sbjct: 64  ATGYSMQTLGFTPELGVLAGTAIATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQ 123

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                                  ++ + R   F    +  ++ +YYV+L +   + + I+
Sbjct: 124 A--------------PFTHGEDGLQGVPRGRLFGLLDLSNDLALYYVVLVVIVAACAFIV 169

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +        I++N+    SL       KL AF +S+   G+AG+         +  
Sbjct: 170 RIVHSPFGQVLVAIKENEARAISLGYDTDRFKLLAFVLSAGLAGLAGSLKVLVLGFETLS 229

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318
              ++ + +V+ + ++GGM +L       A+++ + +    +  +  + + + +  S   
Sbjct: 230 DAYWTMSGLVVLMTLVGGMGTLFGPLLGAALIVALEDRLGDIGEWLASTTGIGWFHSLGE 289

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
             T +  +     +L     ++  
Sbjct: 290 SATIVTGLIFIACVLAFRRGIVGE 313


>gi|150397597|ref|YP_001328064.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
 gi|150029112|gb|ABR61229.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
          Length = 300

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 102/313 (32%), Gaps = 35/313 (11%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89
           + +      IY M A G ++V G +G+++      + +G +         +  I G    
Sbjct: 8   LVNGLTLGSIYGMIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLILTTFIGGVPVV 67

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L++ +++ V  + +      +   + +       +A LI +     +L  +  +T G   
Sbjct: 68  LALLIMMIVGMLTAALWNWTIERVAYRPLRGSFRLAPLITAIGMSIVLSNFIQVTQGPRN 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             +   +  +                 +   +    +++    L +     + RT +  A
Sbjct: 128 KPIPPLVSSVYEIF------------GITVSLKQIVIVVITAILLSVFWYIVNRTPLGRA 175

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +A   +AG  +      +      F+  +  
Sbjct: 176 QRATEQDRKMAALLGVDVDRTISVTFIMGAALAAVAGTMYLMYYGVVVFTD-GFAPGVKA 234

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +  L        +  +  F               L 
Sbjct: 235 FTAAVLGGIGSLPGAVLGGLLIGLIESLWSAYFTIDYKDVATFS-------------ILA 281

Query: 330 LVILMRSHSLLRL 342
           +V++ +   +L  
Sbjct: 282 IVLIFKPSGILGR 294


>gi|257467350|ref|ZP_05631661.1| branched chain amino acid ABC transporter permease [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315918480|ref|ZP_07914720.1| branched-chain amino acid transport system permease livH
           [Fusobacterium gonidiaformans ATCC 25563]
 gi|313692355|gb|EFS29190.1| branched-chain amino acid transport system permease livH
           [Fusobacterium gonidiaformans ATCC 25563]
          Length = 294

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 95/306 (31%), Gaps = 28/306 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLL 95
           I +      IY + + G ++V G   L++        +GAY+ +     +      IW  
Sbjct: 7   IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMVGAYTSLFSIPIFQKMGLPIWAT 66

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           I  + +I    GM+    + +   +   I+ LI +      L                  
Sbjct: 67  IFPAMIICALLGMLTEKIAYRPLRNSPRISNLITAIGVSLFLENIFMKLFTPN------- 119

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                     +          + +       +L    LS ++ L+++ T    A     +
Sbjct: 120 ----TRAFPKVFSQVSIHLFGISFNYGSVITILLTLTLSIALHLFMKNTKYGKAMLATSE 175

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   +   + F     FA+ SA   +A   + ++  ++ P M      I      +L
Sbjct: 176 DYGAATLVGINVNFTIQLTFAIGSALAAIASVLYVSAYPQVQPLM-GSMLGIKAFIAAVL 234

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  L        IL  +  L              F               L +V+L++
Sbjct: 235 GGIGILPGAVIGGFILGIIESLTRAYLSSQLADAFVFG-------------ILIIVLLVK 281

Query: 336 SHSLLR 341
              +L 
Sbjct: 282 PTGILG 287


>gi|297544138|ref|YP_003676440.1| inner-membrane translocator [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841913|gb|ADH60429.1| inner-membrane translocator [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 304

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 94/303 (31%), Gaps = 23/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GA++ +       +S    +  
Sbjct: 18  LINGISVGSIYALIALGYTMVYGIIKLINFAHGDVYMLGAFAGLYATLVLKMSFVPALIF 77

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++    G+I+   + +   +   I  LI +      L        G       +    
Sbjct: 78  SMIVCAILGIIIERLAYRPLRNSPKIVILITAIGVSLFLEYTTMFFLGPQPRAFPEVFKH 137

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                      +      V        ++     L   +   +  T I  A R +  + +
Sbjct: 138 AS---------YTLLGGKVTISNQEILIIAVTVILMILLQYIVHNTKIGKAMRAVSYDMQ 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA    AG       +++ P M      +      +LGG+
Sbjct: 189 AARLMGINVDTTISITFALGSALAAAAGVLVGIYYNKVFPLM-GIMFGLKAFVSAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        IL     L  G     +   + F             + L +++L++   
Sbjct: 248 GIIPGAMAGGFILGITESLVSGYGSSLYRDPVAF-------------VILIIILLVKPSG 294

Query: 339 LLR 341
           L  
Sbjct: 295 LFG 297


>gi|229588875|ref|YP_002870994.1| high-affinity branched-chain amino acid ABC transporter permease
           [Pseudomonas fluorescens SBW25]
 gi|312959466|ref|ZP_07773983.1| permease of ABC branched chain amino acid transporter [Pseudomonas
           fluorescens WH6]
 gi|229360741|emb|CAY47599.1| high-affinity branched-chain amino acid ABC transport system,
           permease [Pseudomonas fluorescens SBW25]
 gi|311286183|gb|EFQ64747.1| permease of ABC branched chain amino acid transporter [Pseudomonas
           fluorescens WH6]
          Length = 307

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 87/290 (30%), Gaps = 2/290 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I  +   +     +P+
Sbjct: 11  LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAMMGIHSLPL 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
               +    +++                   + +   I  I           +    +  
Sbjct: 71  LMTAAFLASIVVTSAYGYSIERVAYRPLRGSNRLIPLISAIGMSIFLQNTVLLSQDSKDK 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   +     F    +  V+       V +        + L++ R+ +  A R   ++ 
Sbjct: 131 SIPNLIPGSFSFGPGGAEEVLISYMQILVFVVTLVAMLGLTLFISRSRLGRACRACAEDI 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +A    +     I+P+   F   +   +  +LGG
Sbjct: 191 KMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNA-GFLVGLKAFTAAVLGG 249

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           + S+        +L         +    +  ++ F     +       I 
Sbjct: 250 IGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299


>gi|167567695|ref|ZP_02360611.1| inner-membrane translocator [Burkholderia oklahomensis EO147]
 gi|167574779|ref|ZP_02367653.1| inner-membrane translocator [Burkholderia oklahomensis C6786]
          Length = 314

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 89/305 (29%), Gaps = 17/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++   GL+++ G +G++++       IGAY+  +           L PV    
Sbjct: 27  LSLFSVLLLMGLGLAVIFGQMGVINMAHGEFMTIGAYTVYMFSWFAQNVWHALTPVYFFF 86

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +      +   +       L     +       +L  W      +           +   
Sbjct: 87  AILAAFALAFAAGWLAEWAL--IRHLYKRPLDTLLATWGLSLGMQQVFRSTFGPKEVSPA 144

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P+  +   +   +V+     ++  ++L L R+      R    N+    +
Sbjct: 145 LPDWLMGSWEPTPGLDIPVSGMFVMGLALLMTGGLLLALYRSRWGLRVRATVANRPMANA 204

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     G+AGA F A     +         +    +V  GG  SL 
Sbjct: 205 AGINTRRTDRMTFAIGCGIAGVAGAAFTAIGS--TGPTSGSLYIVDSFLVVTFGGAASLL 262

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +  +  +                         L ++ + +++++R   L   
Sbjct: 263 GTVASAFGIAQMQSISEFFLS-------------GSIARVLTLLTVVVILMLRPQGLFAS 309

Query: 343 RTPSN 347
           +    
Sbjct: 310 KVRRV 314


>gi|73541095|ref|YP_295615.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72118508|gb|AAZ60771.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 439

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/338 (14%), Positives = 117/338 (34%), Gaps = 32/338 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   +   +     +L+ L L    +  +  ++  Q+ I ++FA   ++++G  G+LS  
Sbjct: 23  KPLNLARWVIWSLTILVMLVLPLIFTGGFAITLMSQMGIMIIFALSYNMLLGQTGMLSFG 82

Query: 70  CVIAYAIGAYS-----YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
             +   +GA+       ++   +  L + +L  V  +     G++ G  + K  G   A+
Sbjct: 83  HAVYSGLGAFIAVHVLNMLGAGKVWLPVSMLPLVGGLAGAFFGVLFGYVTTKKSGTTFAM 142

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            T+ + E+     + +     G+ GI              + +    F          +Y
Sbjct: 143 ITMGIGEMVFASSLMFPEFFGGEGGIS------------TNRVVGDPFLGITFGPGRQVY 190

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y++   C +S   +    +T +      +RDN +    +       +     +S+ F G+
Sbjct: 191 YLIAAWCLVSMVAMYAWTQTPLGRIANAVRDNPERVEFIGYNTQRVRYLVLILSAFFAGI 250

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           +GA  A + + +S +      +  V+    +GG            + +        +   
Sbjct: 251 SGALSAINFEIVSAENVSAVRSGGVLLAAFIGGAGVFFGPIIGAVVFMLFAVALSDLTKA 310

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +                  + +   L+++     +  L
Sbjct: 311 W---------------LLYLGLFFVLMVMFVPGGIASL 333


>gi|300717445|ref|YP_003742248.1| High-affinity branched-chain amino acid ABC transporter permease
           [Erwinia billingiae Eb661]
 gi|299063281|emb|CAX60401.1| High-affinity branched-chain amino acid ABC transporter, permease
           protein [Erwinia billingiae Eb661]
          Length = 304

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 88/304 (28%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P+
Sbjct: 9   LINGLTLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIGLALLASFGIHSFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +    +++                   + +   I      +               
Sbjct: 69  LIFGTLVFTIVVTGVYGWAIERVAYRPLRNSTRLAPLISAIGMSLILQNYVQLSQGPNQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+ + +  F      V       ++L+      A +   ++ T +    R  + +++
Sbjct: 129 GIPTMLTGVLRFDVGDGIVQITWTKVFILIAAFLGMAILTWIIQYTRLGRICRATQQDRR 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A  G+AG     +          F   I   +  +LGG+
Sbjct: 189 MASILGINTDRVISLVFVIGAAMAGLAGVLVTMNYGTFDFYA-GFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        +L        GM    +  +  F               L ++++ R   
Sbjct: 248 GSLPGAMLGGLLLGIAEAQFAGMVNSDYKDVFSFG-------------LLVVILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|92118124|ref|YP_577853.1| inner-membrane translocator [Nitrobacter hamburgensis X14]
 gi|91801018|gb|ABE63393.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Nitrobacter hamburgensis X14]
          Length = 304

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 102/312 (32%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGL 90
           + +  +   IY + A G ++V G +G+++      + IG ++ +I          S   L
Sbjct: 8   LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFTALITFLILVSIGLSAVPL 67

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + +++ VS  I+   G  +   + +       +A L+ +     +L  +  +T G    
Sbjct: 68  ILLIMLVVSMAITAVYGWAVERIAYRPLRQSFRLAPLLSAIGMSFVLSNFSQVTQGAQVK 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +   +    T   S     +  +  ++  +    +L    ++ A       RT      
Sbjct: 128 PIPPLITGGYTLHDSGNFAVQLSNVKIVVVVTTVVLLAIFSYIVA-------RTRFGRDM 180

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    +Q     L   +       F + +A   +AG  +      +   M  F   I   
Sbjct: 181 RACEQDQTMAALLGVDVDRTISMTFVMGAALAAVAGMMYLLYYGLVDFFM-GFVAGIKAF 239

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ SL         +  +           +  +  F               L +
Sbjct: 240 TAAVLGGIGSLPGAMLGGLAIGLIETFWSAYFSIQYKDVAAFS-------------ILIV 286

Query: 331 VILMRSHSLLRL 342
           V++     LL  
Sbjct: 287 VLIFMPTGLLGR 298


>gi|71733898|ref|YP_274918.1| ribose ABC transporter ATP-binding protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|71554451|gb|AAZ33662.1| ribose ABC transporter, ATP-binding protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
          Length = 627

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/336 (12%), Positives = 97/336 (28%), Gaps = 38/336 (11%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LRL+     L L+ ++  L++        + +    +  Q  I  + A G++ V+     
Sbjct: 320 LRLSVDRFGLPLVFILLCLVMAFASEYFMTWRNWMDILRQTSINGILAVGMTYVI-LTKG 378

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A       ++ ++    +   +          G++ G              
Sbjct: 379 IDLSVGSILAFAGLCSALVATQGYG-LLAAVSAGMFAGAMLGVVNGFMVANLSIPPFVAT 437

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
             ++S                  G+          T +              I    + +
Sbjct: 438 LGMLSI---------------ARGMTFILNDGSPVTDLPEEYLALGIGRVGPIGVPIIIF 482

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            ++ + F         R T        +  N+K+  +    +     S + VS    G+A
Sbjct: 483 AVVALIFWMVL-----RYTTYGRYVYAVGGNEKSARTSGIGVRKVMFSVYVVSGLLAGLA 537

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCC 299
           G   +A            S  +  I+ V++      GG  S+        ++  +     
Sbjct: 538 GVVLSARTTSA-LPQAGMSYELDAIAAVVIGGTSLSGGTGSIVGTLFGALLIGVINNGL- 595

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
                   +LL     +      L+++   L+ + R
Sbjct: 596 --------NLLGVSSYYQQVAKGLIIVFAVLIDVWR 623


>gi|78044461|ref|YP_361044.1| high affinity branched-chain amino acid ABC transporter permease
           [Carboxydothermus hydrogenoformans Z-2901]
 gi|77996576|gb|ABB15475.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Carboxydothermus hydrogenoformans Z-2901]
          Length = 294

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 96/303 (31%), Gaps = 23/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GA+  +   +   +S    + V
Sbjct: 8   LINGISVGSIYALIALGYTMVYGIIKLINFAHGDVYMLGAFVGLYATAVLKMSFVPALIV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +     G+I+   + +   +   I  LI +     +L        G       +    
Sbjct: 68  SMIACAILGIIIERLAYRPLRNSPKIVILITAIGVSLLLEYTTMFFLGPQPRAFPEVF-- 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                      +      V        +++    L   +   +  T I  A R +  + +
Sbjct: 126 -------KQVSYPLLGGKVTISNREILIIVVTIILMLLLQYIVHNTKIGKAMRAVSYDMQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA    AG       +++ P M      +      +LGG+
Sbjct: 179 AARLMGINVDTTISITFAIGSALAAAAGVLVGVYYNKVFPLM-GIMFGLKAFVSAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        IL     L  G     +   + F             + L +++L++   
Sbjct: 238 GIIPGAMTGGLILGITESLVSGYGSSLYRDPVAF-------------VILIIILLVKPSG 284

Query: 339 LLR 341
           +  
Sbjct: 285 IFG 287


>gi|62317991|ref|YP_223844.1| branched-chain amino acid ABC transporter ATP-binding/permease
           [Brucella abortus bv. 1 str. 9-941]
 gi|83269968|ref|YP_419259.1| tetracycline resistance protein TetB [Brucella melitensis biovar
           Abortus 2308]
 gi|189023243|ref|YP_001932984.1| branched-chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella abortus S19]
 gi|260544176|ref|ZP_05819997.1| branched-chain amino acid ABC transporter [Brucella abortus NCTC
           8038]
 gi|62198184|gb|AAX76483.1| branched-chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella abortus bv. 1 str. 9-941]
 gi|82940242|emb|CAJ13300.1| Tetracycline resistance protein TetB:ATP/GTP-binding site motif A
           (P-loop):Bacterial inner-membrane translocator:ABC
           transpor [Brucella melitensis biovar Abortus 2308]
 gi|189021817|gb|ACD74538.1| branched-chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella abortus S19]
 gi|260097447|gb|EEW81321.1| branched-chain amino acid ABC transporter [Brucella abortus NCTC
           8038]
          Length = 570

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91
               KY   +   + I  +    L +V G  G++SL  +    +GA+ +  +        
Sbjct: 24  LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + + + +  + +   G+ +GLP+L+ RG  LAI TL  +  F  +L              
Sbjct: 84  LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 133

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                       +   +  +L    + A ++ ++  + +  +W 
Sbjct: 134 ----------FPGQTSFTQVARPDLFANDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R +++A  +   +I  AKLSAFA+S+   G++G   A     +  + F   +++ + +
Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  + G            +++   EL   +N       + F       
Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291


>gi|326330320|ref|ZP_08196630.1| urea ABC transporter, permease protein UrtC [Nocardioidaceae
           bacterium Broad-1]
 gi|325951857|gb|EGD43887.1| urea ABC transporter, permease protein UrtC [Nocardioidaceae
           bacterium Broad-1]
          Length = 362

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 53/321 (16%), Positives = 102/321 (31%), Gaps = 28/321 (8%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             +   +  +   Y + A G+ +  G  G+L L   + + IGAY+  +           +
Sbjct: 26  SDFRLGLLAKYCCYAIAAVGIGLAWGRGGMLVLGQGLYFGIGAYAMAMHLKLADAGPGGV 85

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM--------------SEIFQNILIKWK 141
               A+   A       P        + I  L                 +     ++   
Sbjct: 86  PDFMALYGDATVPGWWEPLRSGALALVVILVLPALVAGLLGLAVFKRRIKGAYFAILSQA 145

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
                   +    +       + +   FF +       +  +Y++  G+  +S   + WL
Sbjct: 146 LAAAFAILLVGQVKTTGGANGLNNFQGFFGYALFDPANKRMLYFIAAGILLVSILAMAWL 205

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            RT        +RD ++    L T     KL+A+ +++    + GA F      +SPD  
Sbjct: 206 YRTRFGELLVAVRDGEERVRFLGTDPANVKLAAYVIAAVLASIGGALFVPIAGIVSPDDV 265

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
               +I +++ V LGG  SL   A    ++                       +F    +
Sbjct: 266 GVVASIGLLAGVALGGRASLLGPAVGALLVGYAETSLSE--------------AFPGSWS 311

Query: 322 TLMVIALFLVILMRSHSLLRL 342
                   LVIL+    L +L
Sbjct: 312 YFQGALFVLVILLLPGGLAQL 332


>gi|91778399|ref|YP_553607.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|296159888|ref|ZP_06842709.1| urea ABC transporter, permease protein UrtC [Burkholderia sp.
           Ch1-1]
 gi|91691059|gb|ABE34257.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia xenovorans LB400]
 gi|295889871|gb|EFG69668.1| urea ABC transporter, permease protein UrtC [Burkholderia sp.
           Ch1-1]
          Length = 387

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/357 (13%), Positives = 97/357 (27%), Gaps = 36/357 (10%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L ++       ++V   +L L +       +  ++  + L Y   A GL +  G  G+LS
Sbjct: 27  LRRWLTTDGYGSIVVLAVLILVVFPLALDVFRLNLMGKYLTYAFVAVGLVMAWGYGGVLS 86

Query: 68  LNCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           L   + + +G Y   +                       +                    
Sbjct: 87  LGQGVFFGLGGYCMAMFLKLEASDPVSTKIQSTPGIPDFMDWNQLTALPFWWKPFHSLPF 146

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNG----------KAGIYVADRLYFLGTTVRS 165
                 +    L     F     +   +                I            +  
Sbjct: 147 ALAAVVVVPCALAFVVGFAMFKRRVGGVYFAIITQAVALILSVLIIGQQGYTGGVNGITD 206

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
           L     +       ++ +Y+V   +  ++      ++R+ +      +RD +        
Sbjct: 207 LRTLLGWDIRGDGAKLILYFVNAVLLLVAILCCRQIQRSKLGTLLLAMRDKEDRVRFSGY 266

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
            +   K+ AF V++    + GA F      +SP       +I ++    +GG  SL    
Sbjct: 267 DVAMFKVFAFCVAAVLAAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAVGGRMSLVGAV 326

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               ++                    F  SF      LM      V++   + L  L
Sbjct: 327 YGAVLVNLGKTW--------------FSESFPNLWLFLMAALFIGVVMAFPNGLAGL 369


>gi|258544253|ref|ZP_05704487.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Cardiobacterium hominis
           ATCC 15826]
 gi|258520491|gb|EEV89350.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Cardiobacterium hominis
           ATCC 15826]
          Length = 304

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 92/304 (30%), Gaps = 15/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-GSRYGLSIWLLIP 97
           I +      IY + A G ++V G +GL++      Y IGAY  V+         + L + 
Sbjct: 8   IINGLTLGSIYALIAIGYTMVYGIIGLINFAHGEIYMIGAYVGVVSLVGLPAFGLPLTLV 67

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           +   I  A  +  G      +  Y  +          + +     + N  A       + 
Sbjct: 68  IILAILIAVVLTGGYGFAVEKIAYKPLRNSPRLVPLISAIGMSIFLQNFVALGQSNKDIA 127

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                              V        + +       ++ L+++++    A R    + 
Sbjct: 128 LQPVLTARWELLANDHGMSVSLSALQIIIFVVTLAAMLALNLFIKKSKTGMACRACASDI 187

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                L           F + +A   +AG   A     I+P M  F   +   +  +LGG
Sbjct: 188 GMAKLLGIDADKIIALTFVIGAALAAIAGILVALYYGTITPYM-GFVAGMKAFTAAVLGG 246

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL              +  L+ F               L +V+L+R  
Sbjct: 247 IGSIPGAMLGGFILGLSESFASAYLASEYKDLVAFS-------------LLIVVLLIRPS 293

Query: 338 SLLR 341
            +L 
Sbjct: 294 GILG 297


>gi|157363663|ref|YP_001470430.1| inner-membrane translocator [Thermotoga lettingae TMO]
 gi|157314267|gb|ABV33366.1| inner-membrane translocator [Thermotoga lettingae TMO]
          Length = 302

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 87/303 (28%), Gaps = 17/303 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L L++      +  G Y      S + +  W+    
Sbjct: 10  LVNALSLGGIYALIAIGYTMVYGILRLINFAHGDVFTYGIYFAFYGVSIFLMPWWISFMF 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S  ++   G  +   + +   +   I+ LI +      L  +  +  G        +   
Sbjct: 70  SIFLTAFLGAFIEKVAYRPLRNAPRISALITAIGVSFFLENFAIVAFGGRAKSFNPQTGI 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +              V   I     L         +I  + RT I  A R I  +  
Sbjct: 130 YPNSF-----LRMLQIGKVRLPILTLITLGITAISLFILIWIVYRTKIGMAMRAISKDIP 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           F + S    + G  +A    +I          +      ++GG+
Sbjct: 185 TTRLMGVNADRVISFTFMIGSGLAAIGGILWAMKYPQI-YPFTGMIPGLKAFIAAVVGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL     +            + F  S            L  V+L++   
Sbjct: 244 GSIQGAMIGGFILGISEIMI-----------VAFIPSLAGYRDAFAYAILLFVLLVKPTG 292

Query: 339 LLR 341
           +L 
Sbjct: 293 ILG 295


>gi|327189516|gb|EGE56671.1| putative branched-chain amino acid ABC transporter, permease
           protein [Rhizobium etli CNPAF512]
          Length = 329

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 60/310 (19%), Positives = 122/310 (39%), Gaps = 29/310 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS      +   AY        +GL   L I +   
Sbjct: 42  FLMKLLCFALFACAFNLLLGYTGLLSFGHATFFGGAAYFTAYTVKEWGLPPELGILIGVA 101

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G++MG  +++ +G Y A+ TL +S++F    ++ K                    
Sbjct: 102 GAAFLGLVMGFFAIRRQGIYFAMITLALSQMFFFFCLQAKFTEG--------------ED 147

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++S+ R   F    +     MYY +L +  +   II     +      ++IR+N++   
Sbjct: 148 GIQSVPRGHLFGFIDLNNSTNMYYFVLAVFLVGILIIWRFINSPFGMILKSIRENEQRAI 207

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL  ++   KL AF +S+A  G+AGA  +      +     +  +  VI + +LGG+ +L
Sbjct: 208 SLGYSVARYKLGAFVMSAALAGLAGAVKSIVFQFATLTDVAWQMSGEVILMTLLGGIGTL 267

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +++ +        F                 T +  I   + +L+    ++ 
Sbjct: 268 IGPLFGAGLVVALENYLATSEFPV---------------TIITGIVFMVCVLIFRRGIIG 312

Query: 342 LRTPSNFLER 351
               S    +
Sbjct: 313 EFYASRLGRK 322


>gi|260428504|ref|ZP_05782483.1| branched-chain amino acid ABC transporter, permease protein
           [Citreicella sp. SE45]
 gi|260422996|gb|EEX16247.1| branched-chain amino acid ABC transporter, permease protein
           [Citreicella sp. SE45]
          Length = 295

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 92/306 (30%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIP 97
           + +  +   ++ + A GL+++ G + +++        +G Y   +L +   +  +L    
Sbjct: 8   VANGLMLGGLFAIVAVGLTLIFGIVKVINFAHGEFLMVGMYLSFLLSTGLDVHPYLTAAA 67

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           V+  +     +   L              +  +      L+    +  G           
Sbjct: 68  VAPALFVLGALTQRLLIQPLMSARDEHVQIFATVGLSTALMNLALLIFGADIANTPAHGV 127

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                +  +                  +VL     L   + L++++T    A R    N+
Sbjct: 128 RSQVMLGEVRILTG-----------QLWVLAAAVALVIGLQLFMKKTRTGRAIRATAQNR 176

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A   +     F  +  F + +A +G+  +  A            F    I    V+LGG
Sbjct: 177 AAARLMGINDKFIYILTFGIGAACVGLGSSLIAPLYPTSPTIGTYFVL--IAFVCVVLGG 234

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        ++  V  L                   +     ++     L+++++  
Sbjct: 235 LGSIPGAFFGALVIGLVDALSGFYIG-------------SDLREAVVFTIFLLILILKPS 281

Query: 338 SLLRLR 343
            L   R
Sbjct: 282 GLFGTR 287


>gi|50123260|ref|YP_052427.1| branched-chain amino acid transporter permease subunit LivH
           [Pectobacterium atrosepticum SCRI1043]
 gi|49613786|emb|CAG77237.1| high-affinity branched-chain amino acid transport system permease
           protein [Pectobacterium atrosepticum SCRI1043]
          Length = 308

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +       +
Sbjct: 12  MFNGLTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDAGWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
              ++    +++                     +   I  I           +    R  
Sbjct: 72  LISVAFVAAVVISSAYGWSIERVAYRPVRTSKRLIALISAIGMSIFLQNYVSLNQGSRDV 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + V                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLVTGQWVLGESNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L  +        F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGISTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L     L        +   + F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLVLGVAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|27380782|ref|NP_772311.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27353947|dbj|BAC50936.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 305

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 96/312 (30%), Gaps = 28/312 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP- 97
           + +  +   IY + A G ++V G +G+++      + IG +  +I            IP 
Sbjct: 8   LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDVFMIGGFIALITFLILISLGLTAIPV 67

Query: 98  -------VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                  V+  I+   G  +   + +       +A ++ +     +L  +  +  G    
Sbjct: 68  ILLVVLLVAMAITALYGWTIERIAYRPLRHSFRLAPMLSAIGMSFVLTNYSQVAQGARVK 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +   +    T   S   F    S+  I  +    VLL      A     +  T +    
Sbjct: 128 PIPPFITGGYTLHESADGFVIQLSNIQIMVVITTIVLL------AIFTWLVSHTRLGRDM 181

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    +Q     L   +       F + +A   +AG  +      +   M  F   I   
Sbjct: 182 RACEQDQTMAALLGVDVDRTISMTFVIGAALAAVAGFMYLLYYGLVDFFM-GFVAGIKAF 240

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ SL         +  +           +  +  F               L +
Sbjct: 241 TAAVLGGIGSLPGAMLGGLAIGLIETFWSAYFSVEYKDVAAFS-------------ILIV 287

Query: 331 VILMRSHSLLRL 342
           V++     LL  
Sbjct: 288 VLIFMPTGLLGR 299


>gi|86749392|ref|YP_485888.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86572420|gb|ABD06977.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 332

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 107/301 (35%), Gaps = 26/301 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +   +++        L +V G  G+ +L     + +GAY+             L++ V 
Sbjct: 41  LAFLTRVIGLAFLVISLDLVTGYCGVATLGHAALFGVGAYAAGNACLAGVTDPILMLLVG 100

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +   A G+I G+   +FRG    + ++   ++   +  K   IT G  G+         
Sbjct: 101 IVAGTATGLISGVLVTRFRGLPQLVLSIAFGQLVAALANKLSSITGGSDGLAGISPGPVF 160

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G              +F ++    Y   + +  ++  ++L   R+  +   R I+D+   
Sbjct: 161 GM------------FNFDMFGRTGYVFSVAVLLIAMVVLLRFARSPFALMCRAIKDDTLR 208

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +    +  + V+ A  G+ GA  A +   +  D   F  +   + ++ILGG  
Sbjct: 209 ARMIGVAVYPRLVVMYCVAGAVAGLGGALTAINTGVVGLDSVGFERSAEALIMLILGGAG 268

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           +L        +           + +++                L+ + L +V+L     L
Sbjct: 269 NLWGALIGAILFELFHHYVSAASPFHW--------------MILIGLLLIVVVLFFPKGL 314

Query: 340 L 340
           +
Sbjct: 315 V 315


>gi|117928116|ref|YP_872667.1| inner-membrane translocator [Acidothermus cellulolyticus 11B]
 gi|117648579|gb|ABK52681.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Acidothermus cellulolyticus 11B]
          Length = 338

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 112/326 (34%), Gaps = 34/326 (10%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
              +L L +    S  +I ++ +  ++Y   A   +++ G  G  SL     + IGAY  
Sbjct: 11  IFAVLVLAMPLMTSAHWILNIAVFTVMYAGLALAWNLIGGFAGYPSLGHAAFFGIGAYVE 70

Query: 82  VILGSRYG----LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            I  + +        + ++P+  +      + +   +L+ R D  AI T+ +  + Q + 
Sbjct: 71  AIWFNHHSVGAGYLPFFVLPIVGLAVAFAMLPVAWVALRTRADVFAIVTITLLFVVQTLA 130

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                +T G  GI +                          YE   Y+ +  +  L+  +
Sbjct: 131 FNLHSVTEGSQGIGIHPPP-----------------FDPATYERPFYWAMAAIFLLAMIV 173

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              ++ +    A   IR ++     +   +  AKL AF +S+A   M GA +A     I 
Sbjct: 174 TWLVQNSKTGLALLAIRGDEDRASGIGVHVTLAKLVAFFLSTALTAMIGAVWAYYVTFIY 233

Query: 258 PD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P         I ++ +  LGG  +L        IL    +               +    
Sbjct: 234 PQFAVDPLVTIGMVLMTFLGGRATLWGPVVGALILAPAQQYL------------AYQFGS 281

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
           +  +         +V++     ++  
Sbjct: 282 SRLYLLAYAAVFLIVMVFLPRGIVPT 307


>gi|221202198|ref|ZP_03575233.1| inner-membrane translocator [Burkholderia multivorans CGD2M]
 gi|221208741|ref|ZP_03581740.1| inner-membrane translocator [Burkholderia multivorans CGD2]
 gi|221171373|gb|EEE03821.1| inner-membrane translocator [Burkholderia multivorans CGD2]
 gi|221177992|gb|EEE10404.1| inner-membrane translocator [Burkholderia multivorans CGD2M]
          Length = 324

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 57/324 (17%), Positives = 133/324 (41%), Gaps = 16/324 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+Y +LL   L A     Y   +  ++L + +FA   ++++G  GLLS    +  A   Y
Sbjct: 5   VLYGVLLAALLVAPFIGAYPVFVM-KVLAFALFAAAFNLLIGYTGLLSFGHAMFLATAGY 63

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +        G +  L +     I+   G+++GL +++ +G Y A+ TL  +++   I ++
Sbjct: 64  ATGYSMQTLGFTPELGVLAGTAIATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQ 123

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                                  ++ + R   F    +  ++ +YYV+L +   + + I+
Sbjct: 124 A--------------PFTHGEDGLQGVPRGRLFGLLDLSNDLALYYVVLVVIVAACAFIV 169

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +        I++N+    SL       KL AF +S+   G+AG+         +  
Sbjct: 170 RIVHSPFGQVLVAIKENEARAISLGYDTDRFKLLAFVLSAGLAGLAGSLKVLVLGFETLS 229

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318
              ++ + +V+ + ++GGM +L       A+++ + +    +  +  + + + +  S   
Sbjct: 230 DAYWTMSGLVVLMTLVGGMGTLFGPLLGAALIVALEDRLGDIGEWLASTTGIGWFHSLGE 289

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
             T +  +     +L     ++  
Sbjct: 290 SATIVTGLIFIACVLAFRRGIVGE 313


>gi|148549922|ref|YP_001270024.1| inner-membrane translocator [Pseudomonas putida F1]
 gi|148513980|gb|ABQ80840.1| inner-membrane translocator [Pseudomonas putida F1]
          Length = 484

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 211 ITFGLLGVINMAHGEMLMLGAYSTYMVQVLLQRFAPGAIEFYPLIALPVAFAVSAGVGMA 270

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         I +      +  +  + +         +
Sbjct: 271 LER--TVIRHLYGRPLETLLATWGISLILIQAIRLLFGAQNVEVSNPAWLSGGIQLLPNL 328

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++     +     L L RT +    R +  N+        +     + AF +
Sbjct: 329 VLPHNRLVIIGFALAVVLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVSTGRVDMLAFGL 388

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    +L
Sbjct: 389 GSGIAGLGGV--ALSQVGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSLWAAFGLGIANKL 446

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 447 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 481


>gi|292656917|ref|YP_003536814.1| putative branched-chain amino acids ABC transporter permease
           [Haloferax volcanii DS2]
 gi|291372970|gb|ADE05197.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haloferax volcanii DS2]
          Length = 445

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 63/400 (15%), Positives = 130/400 (32%), Gaps = 64/400 (16%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQ---ILIYVMFAWGLSIVVGSLGLLSL 68
             +L LL      +L   +     +  ++S+      I ++ M +  L++  G  GL ++
Sbjct: 18  LIVLVLLGTYLAYVLAGVVLGYTLRGQLNSIATLTFYIGVFAMLSLALNLHWGYTGLFNI 77

Query: 69  NCVIAYAIGAYSYVILGSRYGL------------SIWLLIPVSAMISGACGMIMGLPSLK 116
             V   A+G Y   I+     +             +W+ I      +   G+++ LP+L+
Sbjct: 78  GIVGFMAVGVYVTAIVTKPTYVAGGAAQVGGLGLPLWVGILAGMTAAALLGLVVALPALR 137

Query: 117 FRGDYLAIATLIMSEIFQNILI-----------KWKPITNGKAGIYVADRLYFLGTTVRS 165
            R DYLAI T+ MSEI +   +                  G   I               
Sbjct: 138 LRADYLAIVTIAMSEIVRFSFLSGELQQFQLFGNRVGFGGGSGLILDFSPPLEALLRGVG 197

Query: 166 LIRFFRFPSS-----------FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
           L   +                 V+  +    +LLG       ++     +      + IR
Sbjct: 198 LWNGYLGFVDAFQVLVPRNPKPVVDGLVYGLLLLGFVAGFYWLLKRTGESPFGRVLKAIR 257

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           +++    +L       K+ +F +  A +G+AG  +   +  ++P+ F+      +   +I
Sbjct: 258 EDEDVANALGKNTDRFKIKSFMLGCALMGLAGILWLVPQGAVTPNFFRPRVTFFIWIALI 317

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN----------------- 317
           +GG  S +      A+   V+           +++     S +                 
Sbjct: 318 IGGAGSNTGSVLGGAVFAAVLYQGPRYFQNLVSAVFPNFDSPSGFGQAISPLISQFDPVP 377

Query: 318 ----------MRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                          +M + L  ++  R   +L  R  + 
Sbjct: 378 FLLYTVDSIRQLQLVVMGLVLIWLMHNRPEGMLGYRKETA 417


>gi|254731670|ref|ZP_05190248.1| branched-chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella abortus bv. 4 str. 292]
 gi|260759428|ref|ZP_05871776.1| predicted protein [Brucella abortus bv. 4 str. 292]
 gi|260669746|gb|EEX56686.1| predicted protein [Brucella abortus bv. 4 str. 292]
          Length = 570

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91
               KY   +   + I  +    L +V G  G++SL  +    +GA+ +  +        
Sbjct: 24  LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + + + +  + +   G+ +GLP+L+ RG  LAI TL  +  F  +L              
Sbjct: 84  LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 133

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                       +   +  +L    + A ++ ++  + +  +W 
Sbjct: 134 ----------FPGQTSFTQVARPDLFASDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R +++A  +   +I  AKLSAFA+S+   G++G   A     +  + F   +++ + +
Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  + G            +++   EL   +N       + F       
Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291


>gi|116695973|ref|YP_841549.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113530472|emb|CAJ96819.1| ABC-type transporter, permease component: HAAT family [Ralstonia
           eutropha H16]
          Length = 287

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 88/307 (28%), Gaps = 27/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      +Y + A GL++V G L + +      Y  GAY    L +  G++ WL +  
Sbjct: 8   FLNGLTLGGVYSLVALGLTLVYGILHVPNFAHGAFYMAGAYVSYFLMTSLGVNYWLAMLG 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A++     M           +   +  +I +      L        G     +      
Sbjct: 68  AALVVAVLSMAADRLVFHPLRNSPELHDMIAAIGILLFLEAGAQALWGADFHRMPTP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +   +    ++     L   + L+L RT        +  N++
Sbjct: 125 ---------YGQIVDVFGLTAPLQRLLIIGAAFALMVLLHLFLTRTMTGATIMAMAQNRE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        L  FA+S A   +A   +A     +               I+ILGGM
Sbjct: 176 GAALVGIDATRVTLLVFAISGALAAIAATLYAP--INLVYPSMGNLVITKAFVIIILGGM 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+                               +  + L +++ +R   
Sbjct: 234 GSIPGAIVGGLIIGMAESFGGFYVS-------------TDYKDIIAFVLLVVILSIRPQG 280

Query: 339 LLRLRTP 345
           L   +T 
Sbjct: 281 LFAGKTA 287


>gi|148256164|ref|YP_001240749.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146408337|gb|ABQ36843.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 336

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 53/352 (15%), Positives = 110/352 (31%), Gaps = 25/352 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQ---------KYIDSMGIQILIYVM 51
           MS F  R   +  ++ L   ++  L+F                    + +      +Y +
Sbjct: 1   MSRFIERQPIWSLVILLAIALFTWLIFAVWPPGLEDAIGRKKVFLSAVFNGITLGGLYFL 60

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A G +++ G +  ++L     Y  G Y    + +  G  I   +    +++    ++  
Sbjct: 61  VASGFTLIFGLMRNVNLAHGSLYLFGGYVGYGISAATGSWILAFVVAFVVVAAIGILLQF 120

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           L   +  G  L    + +        +           I     L               
Sbjct: 121 LVFRRMEGQDLRQTMVTIGLSIVFADLMLWAFGGDFYQIQTPAWLIGPVQLPLMTAMKSS 180

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
             + F+ Y +    +  G   +   + L L RT +    R   D+++   +    I    
Sbjct: 181 GEAVFLQYPLVRLVIFCGSVVIGVLMWLALNRTRVGMIVRAGVDDREILAATGVHIQLVF 240

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           +  FA+ +   G+AG      +     +  +F      + +VI+GGM S+   A    I+
Sbjct: 241 VLVFALGAGLAGIAGVVGGTFQSISPGEDTRFLL--ASLVVVIVGGMGSIPGAALGALII 298

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
               +L                         +  + + LV+ +R   LL  R
Sbjct: 299 GLAEQLGSVY--------------IPTYAIVVTFLIMVLVLALRPQGLLARR 336


>gi|260425476|ref|ZP_05779456.1| urea ABC transporter, permease protein UrtC [Citreicella sp. SE45]
 gi|260423416|gb|EEX16666.1| urea ABC transporter, permease protein UrtC [Citreicella sp. SE45]
          Length = 413

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 50/367 (13%), Positives = 101/367 (27%), Gaps = 36/367 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +  +   +  +   +L   +G             + L  ++ A  + +V G  G+LSL  
Sbjct: 15  WFLLSLGVFTLIVTVLADGIGNGMISTSFVKTLGRTLCLMLVAVAMDVVWGYTGILSLGH 74

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLL-------------------------------IPVS 99
           +  + +G Y   +        I +                                 P+ 
Sbjct: 75  MAFFGLGGYMIGMWLMYARTEIIVSESLRAAAVPPTPEEIHDAVGTQIFGVVGSSDFPLI 134

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
              + +    + L  +      L    L        + +         A      +    
Sbjct: 135 WAFASSFWAQLALVVIVPGLLALIFGWLAFRSRVTGVYLSILTQAMTLALSLYLFQNDSG 194

Query: 160 GTTVRSLIRFFRFPSSFVI----YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                 L      P    +      I  ++           +  W+    + +  R IRD
Sbjct: 195 LRGNNGLSGLQNLPGLDSVPQSMVSIAFFWASAAALAAGYVLFAWVVSGKMGSVIRGIRD 254

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N+     L   +   KL  F V++   G+AGA +      I+P       +I +   V +
Sbjct: 255 NEGRVRFLGYHVESYKLFVFTVTAVVAGLAGALYYPQAGIINPAEVAPIASIYLAVWVAI 314

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG   L   A   A +  +     G           +   +      L+ ++   V L+ 
Sbjct: 315 GGRGRLYGAALGAAFVSLLSSWFTGGGVPNIPLGF-YTIQWTDWWLVLLGVSFVAVTLLA 373

Query: 336 SHSLLRL 342
              +  L
Sbjct: 374 PKGIGGL 380


>gi|55376686|ref|YP_134537.1| branched-chain amino acid transport system / permease component
           [Haloarcula marismortui ATCC 43049]
 gi|55229411|gb|AAV44831.1| branched-chain amino acid transport system / permease component
           [Haloarcula marismortui ATCC 43049]
          Length = 384

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 91/274 (33%), Gaps = 16/274 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               ++  +    LS+V G  G+LS   V+ + IGAY++ ++   +     +   V A I
Sbjct: 57  LSLFMVLALLGLSLSVVWGYSGVLSFGQVVFFGIGAYTFGVVSINFATPGGITAAVVAGI 116

Query: 103 SGACG----MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT--------NGKAGI 150
            G       +   +     R  Y+ I TL+ + +    + +              G  G+
Sbjct: 117 VGGGVSAAILGYFMFYGGVRDVYVTIITLVSTIVMHTFMAQTAGSEWAIGEAALGGFNGM 176

Query: 151 YVADRLYFL----GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                L                  R            YY++L +   +   +  L  +  
Sbjct: 177 PDIPLLTLGIEGASYQFIYNPFPMRIIGIGSFEISPFYYLVLLLLVGTYLGLRVLVNSDY 236

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                 +R+++         +   K   F +  A  G++G  +AA    I P +F     
Sbjct: 237 GRVMVAVREDEDRTEMFGYNVTRIKFVVFTLGGALAGLSGVLYAARNVYIDPTVFSLLFA 296

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
            + +  V +GG  SL     AT  +  +     G
Sbjct: 297 TLPVIWVSIGGRKSLLGAVVATLAIEYLRISMAG 330


>gi|239835046|ref|ZP_04683374.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301]
 gi|239823109|gb|EEQ94678.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301]
          Length = 326

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 54/328 (16%), Positives = 129/328 (39%), Gaps = 33/328 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +   L+  L         +     +++L + +FA   ++++G  G+LS      +
Sbjct: 23  LSAVILGIALVGLLAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 78

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              AY        +G++  L + +  + + A G+++G  +++ +G Y  + TL ++++F 
Sbjct: 79  GGAAYITAHTVKVWGVTPELGLVLGVLAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 138

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              ++                       ++ + R + F    +   + MYY +L +  L 
Sbjct: 139 FFCLQASFTHG--------------EDGLQGVPRGYLFGIIDLNQPMTMYYFVLAVFVLG 184

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +I  +  +      +++R+N+    SL  ++   KL+AF +S+A  G+AG   A    
Sbjct: 185 VFVIWRIINSPFGMILKSVRENENRAISLGYSVNRYKLAAFVMSAALAGLAGGLKALVFQ 244

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             +     +  +  VI + +LGG+ +L       A ++ +       +F           
Sbjct: 245 FATLTDVGWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNYLATSDFPV--------- 295

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 T +  +     +L+    ++  
Sbjct: 296 ------TIVTGVIFMACVLLFRKGIIGE 317


>gi|330888012|gb|EGH20673.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 526

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 72/250 (28%), Gaps = 4/250 (1%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 270 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAVIGMA 329

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 330 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 387

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 388 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 447

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 448 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 505

Query: 298 CCGMNFYYFN 307
                     
Sbjct: 506 LEPQIGAVLG 515


>gi|221214307|ref|ZP_03587279.1| inner-membrane translocator [Burkholderia multivorans CGD1]
 gi|221165962|gb|EED98436.1| inner-membrane translocator [Burkholderia multivorans CGD1]
          Length = 324

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 58/324 (17%), Positives = 133/324 (41%), Gaps = 16/324 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+Y +LL   L A     Y   +  ++L + +FA   ++++G  GLLS    +  A   Y
Sbjct: 5   VLYGVLLAALLVAPFVGAYPVFVM-KVLAFALFAAAFNLLIGYTGLLSFGHAMFLATAGY 63

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +        G +  L +     I+   G+I+GL +++ +G Y A+ TL  +++   I ++
Sbjct: 64  ATGYSMQTLGFTPELGVLAGTAIATLLGLIVGLFAIRRQGIYFAMITLAFAQMVYFIYLQ 123

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                                  ++ + R   F    +  ++ +YYV+L +   + + I+
Sbjct: 124 A--------------PFTHGEDGLQGVPRGRLFGLLDLSNDLALYYVVLVVIVAACAFIV 169

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +        I++N+    SL       KL AF +S+   G+AG+         +  
Sbjct: 170 RIVHSPFGQVLVAIKENEARAISLGYDTDRFKLLAFVLSAGLAGLAGSLKVLVLGFETLS 229

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318
              ++ + +V+ + ++GGM +L       A+++ + +    +  +  + + + +  S   
Sbjct: 230 DAYWTMSGLVVLMTLVGGMGTLFGPLLGAALIVALEDRLGDIGEWLASTTGIGWFHSLGE 289

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
             T +  +     +L     ++  
Sbjct: 290 SATIVTGLIFIACVLAFRRGIVGE 313


>gi|154248136|ref|YP_001419094.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154162221|gb|ABS69437.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 630

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 52/267 (19%), Positives = 108/267 (40%), Gaps = 18/267 (6%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 Y  ++G +ILI+V+FA  L  ++   GL S      + +GAY    +    G  
Sbjct: 325 PFFLGNYALTVGAEILIFVLFAASLHFIMTVGGLASFGHAAYFGLGAYGAAFMVKFLGAP 384

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           +   + V   +     ++ G   ++  G Y A+ TL  ++I  ++  +W  +T G  G+ 
Sbjct: 385 MEAALIVGPALGLVGAVLFGWFCVRLSGVYFAMLTLAFAQIAWSVAFQWVDVTGGDNGLL 444

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                               +PS++       +++ L +  +   ++  L  +      R
Sbjct: 445 GI------------------WPSAWAAKPQGFFWLALAVAVIGVGLLRMLVFSPFGYGLR 486

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +RD+     ++       + +AF V+  F G+AGA FA  +  + PD      ++  + 
Sbjct: 487 AVRDSTLRAEAIGLDRARLQWAAFVVAGTFAGIAGALFAFLKGSVFPDFMGIPTSVDGLV 546

Query: 272 IVILGGMTSLSKIAKATAILIGVVELC 298
           +V+LGG+ ++S       +   +    
Sbjct: 547 MVLLGGIETVSGAVVGAVLYKALAIWL 573



 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 95/307 (30%), Gaps = 28/307 (9%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY--GLSIWLLIP 97
            S         + A GLSI+ G   +++      Y +GAY   +L +R+   +  W  I 
Sbjct: 9   LSGLASAASLFLVASGLSIIFGVTRIVNFAHGAFYMLGAYVAYVLTTRFAGPIGFWGAIL 68

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            +++I  A G +M +  L+       +  L+ +     ++     +  G   +       
Sbjct: 69  AASVIVAALGALMEMVLLRRIYHAPELFQLLATFGVTLMVQDLVVVIWGPEDLLGPRAPG 128

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
             G                 +   +  ++++    +  ++ L   +T      R    ++
Sbjct: 129 LAGA----------VSLFGRMVPTYDLFLMVLGPVVLGALWLLFHQTRWGVLVRAATQDR 178

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +   +L     +     FA+      + GA                   + V+ ++    
Sbjct: 179 EMVAALGVNQKWLFTGVFALGVFLAALGGALQIPRTTVTHTMDLSVIVEVFVVVVIGG-- 236

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+     A  I+  +      +                     ++ + + +V+++R  
Sbjct: 237 LGSVLGAFVAAIIVAELNAFGILI--------------LPQISLIMVFLVMAVVLVVRPW 282

Query: 338 SLLRLRT 344
            L     
Sbjct: 283 GLFGKAE 289


>gi|126668822|ref|ZP_01739768.1| ABC transporter, membrane spanning protein [Marinobacter sp. ELB17]
 gi|126626705|gb|EAZ97356.1| ABC transporter, membrane spanning protein [Marinobacter sp. ELB17]
          Length = 377

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 49/340 (14%), Positives = 105/340 (30%), Gaps = 30/340 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+    ++ +         Y  ++  + L+  M A  +++  G+ G+L+L   + + IG+
Sbjct: 13  ALFAVFVVLIIPWLANYSGYDLNVYARYLVLGMAAAAVALSWGTAGILNLGQALTFGIGS 72

Query: 79  YSYVILG------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           Y   +        ++ G     +   +              S       L    +     
Sbjct: 73  YIMAMHLKLKASEAQAGGMPDFMGWTNMEELPWFWEPFQSVSFTLAAGILIPVAIASLIG 132

Query: 133 FQNILIKWKPITNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
                 +   +             +  I    R       +  L     F  S  +Y + 
Sbjct: 133 GFMFRGRITGVFVAIITLSLMLAVQLWIISEQRFTGGQNGLTGLAALELFGWSVDVYGLA 192

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            YY++ G   +  ++ L   R+      R IR + +        +   ++ AFA S+   
Sbjct: 193 FYYMVAGCLLVVLTLALLFLRSKAGLVLRAIRADPERTRFFGYDVSTYEVVAFATSAGIA 252

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+AG  +A      SP     S ++  +    +GG  S+         +         + 
Sbjct: 253 GIAGMLYAMILGFASPTYMGLSLSLAFVIWAAVGGRESIVAATLGGIGVNMAEGRLSDL- 311

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                        F  + T ++ +   +V+L     L  L
Sbjct: 312 -------------FFDQWTLILGVIFIVVVLFLPRGLFGL 338


>gi|300691442|ref|YP_003752437.1| branched-chain amino acid ABC transporter membrane component
           [Ralstonia solanacearum PSI07]
 gi|299078502|emb|CBJ51155.1| putative ABC-type branched-chain amino acid transporter, membrane
           component [Ralstonia solanacearum PSI07]
          Length = 440

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/333 (12%), Positives = 108/333 (32%), Gaps = 17/333 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +   L      L+ + L     + +  ++  Q+ I ++FA   ++++G  G+LS  
Sbjct: 23  RPLNLARWLIWGTTALVMIVLPLIWPRGFAITLLSQMGIMIIFALSYNMLLGQSGMLSFG 82

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
             +   +GA+  V L +R G +  L I     ++          +L              
Sbjct: 83  HAVYAGLGAFMAVHLLNRIGAAQALGIGGPLAVALLPVAGGLGGALFGVLFGYVTTKKAG 142

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +      L   + +    + +   D     G    +                 +YY++  
Sbjct: 143 TTFSMITLGIGEMVF--ASALMFPDFFGGEGGVSTNRSIGEPLLGIGFGPARQVYYLIAA 200

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
            C +S +++    +T +      +RDN +    +       +     +S+ F G+AGA  
Sbjct: 201 WCLISMALMYAWTQTPLGRIANAVRDNPERVEFVGYNTQRVRYLVVILSAFFAGIAGALS 260

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + + ++ +      +  V+    +GGM +         + +        +   +    
Sbjct: 261 CINFEIVTAENVSAVRSGAVLLAAFIGGMGTFFGPIIGAVLTVFFTVALSSVTKAW---- 316

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         + +   L+++     +  L
Sbjct: 317 -----------LLYLGLFFVLMVMYAPGGIASL 338


>gi|288916431|ref|ZP_06410809.1| ABC transporter related protein [Frankia sp. EUN1f]
 gi|288352202|gb|EFC86401.1| ABC transporter related protein [Frankia sp. EUN1f]
          Length = 969

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 54/316 (17%), Positives = 116/316 (36%), Gaps = 19/316 (6%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
               +    +     +  I   I  +    L +V G  G +SL  +      A++   L 
Sbjct: 333 AIAVVALLATDGTWRAAVIGTFIAAIIGLSLVVVTGYAGQVSLAQLALAGAAAFTLSGLT 392

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
             + +       ++A+ +   G+++GLP+L+ RG  L I TL ++   + +  +   I +
Sbjct: 393 QSWHVPFPFAPLLAALFAAGLGVVIGLPALRLRGLTLGIVTLALAYAMEAVWFRNTDIVD 452

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
            +        L+ L   + S   F R              + L +       +  LR +A
Sbjct: 453 AEGARVTQPSLFGLDLGIGSGKAFPRIEFG---------LLCLAVLVAVCWGVARLRMSA 503

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           + +A   +R N+++   +   ++  K+ +FA++S   G+ GA  A  R  ++ D F    
Sbjct: 504 LGSAMLAVRANERSAAGIGVNVVRIKVISFALASFIAGLGGALLAYRRGVVTYDSFTAIG 563

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
            + +++   L G+TS+     A       +                         + L  
Sbjct: 564 GLTLLATAYLAGVTSVYGGITAGITAGTGIVFI----------AFDRWVHVGDWFSVLSG 613

Query: 326 IALFLVILMRSHSLLR 341
           +A+  V++     +  
Sbjct: 614 LAVIAVLIGHPEGVAS 629



 Score = 39.5 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 35/275 (12%), Positives = 77/275 (28%), Gaps = 12/275 (4%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G+++       +  AYSY  L     L +   +P  A + G  G+   L      G  L
Sbjct: 31  SGVINFATGAVASYVAYSYAALRDGQLLVLLPGLPTYAELGGPLGLAPALVIALLIGGLL 90

Query: 123 AIATLIMSEIFQNILIKWKPITNG-----KAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                ++                           +A R+     +V ++    R+    +
Sbjct: 91  GAVLYLLVFRPLREAPPLARAVASLGVLVVLQSLLAIRVGTAPVSVGNIFPSERWEIGSL 150

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +      Y+ + +  L+  +    R T      R   ++Q   F          L  + +
Sbjct: 151 LVLSDRLYLAVTVVALALVLAAGFRFTRFGLLTRAAAESQTGAFVSGVKPDQLALYNWMI 210

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           S    G AG   A                +  ++  ++GG   L     A   +  +   
Sbjct: 211 SGVVAGAAGILIAPLSPLA--PSTYTLFVVPALAAAVVGGFQHLLPTVAAGLAVGMLQSE 268

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
              +          +           +++ +  ++
Sbjct: 269 ATSLA-----GDHSWLPRTGSSELVPLIVIMVALL 298


>gi|300691048|ref|YP_003752043.1| high-affinity branched-chain amino acid transport system permease
           (livM or livH) [Ralstonia solanacearum PSI07]
 gi|299078108|emb|CBJ50751.1| putative high-affinity branched-chain amino acid transport system
           permease (livM or livH) [Ralstonia solanacearum PSI07]
          Length = 398

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 46/344 (13%), Positives = 93/344 (27%), Gaps = 32/344 (9%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            +L  + V    L+           Y  ++  +I+ Y + A  L +V G  G+LSL   +
Sbjct: 32  SLLVCIGVPVCALVVPEGHPLHLSAYALTLVGKIMCYALAALALDLVWGYCGILSLGHGL 91

Query: 73  AYAIGAYSYVIL------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
            +A+G Y+  +                                          +++ L  
Sbjct: 92  FFALGGYAMGMYLMRAIGREGVYQSDLPDFMVFLDWKELPWFWHGTEHFAWAALLVVLVP 151

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
                 +   A     +     +I            +  +  +          R   FP 
Sbjct: 152 GVLAWLFGFFAFRSRVKGVYLSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGFPI 211

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
           + V     ++        L+      +  +        IRD +          +  KL  
Sbjct: 212 AAVSTRTVLFVATFIALVLALIACRAIVTSKFGRVVTAIRDAEARVMFSGYNPLGYKLFV 271

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           +  S+   G+AGA +      I+P       +I +   V +GG  +L        ++ G 
Sbjct: 272 WTFSAVLCGIAGALYVPQVGIINPGEMSPGNSIEMAVWVAVGGRGTLVGPIVGAFLVNGA 331

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +                         ++     LV L   + 
Sbjct: 332 KTVLTAW--------------VPEYWLFVLGAIFVLVTLYLPNG 361


>gi|294629450|ref|ZP_06708010.1| ribose ABC transporter, permease [Streptomyces sp. e14]
 gi|292832783|gb|EFF91132.1| ribose ABC transporter, permease [Streptomyces sp. e14]
          Length = 649

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 99/314 (31%), Gaps = 29/314 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +V  + L    G   +   + ++G+Q  +  + A+G++ V+ S G + L+     
Sbjct: 27  ALTALIVLVIALSALSGDFLTTDNLLNIGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVA 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A       + +G+ + L + ++     A G++ G      +         ++     
Sbjct: 86  ALSATVLAWSATSHGVPVVLAVLLAVATGIAAGLVNGFLISYGKLPPFIATLAML----- 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                            V   L  + +    +               ++   +L M  + 
Sbjct: 141 ----------------SVGRGLSLVISQGSPIALPDSVSHLGDTLGGWLPTPVLVMVVMG 184

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L RT I  +   I  N++A       +   KL+ +A+S  F   AG   AA   
Sbjct: 185 LITALILGRTYIGRSMYAIGGNEEAARLSGLRVKRQKLAIYALSGLFAAAAGIVLAARLS 244

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              P        +  I+ V++GG          S       IL  +      ++   F  
Sbjct: 245 SAQPQAAN-GYELDAIAAVVIGGASLAGGTGKASGTLIGALILAVLRNGLNLLSVSAFWQ 303

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 304 QVVIGVVIALAVLL 317


>gi|225573824|ref|ZP_03782579.1| hypothetical protein RUMHYD_02028 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038812|gb|EEG49058.1| hypothetical protein RUMHYD_02028 [Blautia hydrogenotrophica DSM
           10507]
          Length = 198

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 68/168 (40%), Gaps = 15/168 (8%)

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
                  +  +Y+ L +  L   +I  L ++ +  A   IR++  A  ++   +   K+ 
Sbjct: 18  FGIKFGRVQFFYLALAITLLVMLVIYRLVKSRVGRALIAIREDDLAAMAIGVNVRNYKIL 77

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
           AF + +   G+ G+ +A     ISPD + F  ++ +  +VILGGM +         +L  
Sbjct: 78  AFGIGTFCAGLMGSVYAHYITFISPDQYTFQISVNIFCMVILGGMGTTIGPVLGAIVLTL 137

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           + E+    + Y                  ++ + + L ++ R   ++ 
Sbjct: 138 LPEVMRTFDVY---------------RMIIVGLLMVLCMIFRPQGIIG 170


>gi|108804853|ref|YP_644790.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
 gi|108766096|gb|ABG04978.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
          Length = 321

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 107/324 (33%), Gaps = 43/324 (13%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL---- 94
           +        I  + A G ++V G + L++      + IG++  + + S     I L    
Sbjct: 14  LLIGITNGSIIALIALGYTLVYGIIELINFAHGDNFMIGSFVGLTVLSGTFFGIGLFAPI 73

Query: 95  ---------------LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                           +  +  + G  G+ +   + K   +   +A LI +     IL  
Sbjct: 74  TDESGLLLKALGVGMAMLAAMAVCGLLGVGIERVAYKPLRNSPRLAVLITAIGMSFILQN 133

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +  G A +   D +                 S  +++     +V+     L  ++  
Sbjct: 134 VGLLWKGPAQVPFPDLISGANL----------LDSGEIVFRYKDLFVIAVTVPLLLALSY 183

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           +++ T    A R +  +++A   +   +       F +     G +G  +    + I+  
Sbjct: 184 FVQNTKQGKAMRAVAQDKEAAAMVGIDVDRTISVTFLLGGMLAGASGVMYGL-FNGITVF 242

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
              F++ +   +  +LGG+ +L+       ++  +  +        +             
Sbjct: 243 NVGFTQGLFAFTAAVLGGIGNLTGAVVGGILIGVIAAMSDQYIGVRWTE----------- 291

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
              ++   L LVI+ R   LL  R
Sbjct: 292 --IMIFAVLILVIVFRPRGLLGDR 313


>gi|13470930|ref|NP_102499.1| ABC transporter permease [Mesorhizobium loti MAFF303099]
 gi|14021673|dbj|BAB48285.1| probable permease of ABC transporter [Mesorhizobium loti
           MAFF303099]
          Length = 317

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/319 (14%), Positives = 99/319 (31%), Gaps = 18/319 (5%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           L    + + I        + ++ A GL+I  G +G++++       +GAY+  ++     
Sbjct: 16  LAFWDAGQNIWYGISLGSVLLLAAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQQVIR 75

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
            S   L   S +I+     ++             +   +     + +L  W      +  
Sbjct: 76  TSFPGLFDWSLVIALPLAFLVAALVGLAIER--GVIRFLYGRPLETLLATWGVSLILQQA 133

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +              S      F    +       ++L+    +   ++  ++RT     
Sbjct: 134 VRSIFGPTNQEVGNPSW-MSGSFDIGQLAITWNRLWILVFALTVFGVLLYVMKRTPWGLQ 192

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R +  N++   S+     +     FA+ S   G+AG   A S+             I  
Sbjct: 193 MRAVTANRRMAASMGIRTPWVDALTFALGSGIAGIAGV--ALSQIDNVSPNLGRGYIIDS 250

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             +V+ GG+ +L         L  V +                          ++++ + 
Sbjct: 251 FMVVVFGGVGNLWGTLVGAFSLGIVNKFLEPYAGAVLGK-------------IVVLVLII 297

Query: 330 LVILMRSHSLLRLRTPSNF 348
           L I  R   L  L+  +  
Sbjct: 298 LFIQKRPRGLFALKGRAVE 316


>gi|150376328|ref|YP_001312924.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
 gi|150030875|gb|ABR62991.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
          Length = 388

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 105/356 (29%), Gaps = 35/356 (9%)

Query: 13  KILCLLAVVYPLLLFLFLG--ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
            IL LLAV+ P L  L           Y+ S+  + L Y + A  L +V G  G+LSL  
Sbjct: 19  AILLLLAVIVPALNLLTAPDHPLHVPTYMVSLFGKYLTYALLALALDLVWGFCGILSLGH 78

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
              +A+G Y+  +   R   +                    LP   +  D    A L++ 
Sbjct: 79  AAFFALGGYAMGMYLMRQIGARGSYGNPLLPDFMVFLNWKELPWFWYGFDMFWFAALMVI 138

Query: 131 EIFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFR 171
            +   +   +                             +  D  +     +        
Sbjct: 139 LVPGLVAFVFGWFAFRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILG 198

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F          ++         S  +   +  +        +RD +     L   +   K
Sbjct: 199 FNIQADGTRAALFAASALALAGSLVVTSGIVGSKFGKVLVALRDAESRTRFLGYRVEHMK 258

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           L AF VS+   G+AGA +      I+P  F  + +I V+    +GG  +L        ++
Sbjct: 259 LFAFTVSAMMAGIAGALYVPQVGIINPGEFAPANSIEVVIWTAVGGRGTLIGPIVGAILV 318

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
            G   +              F  +F       +     LV L     ++       
Sbjct: 319 NGGKSI--------------FTAAFPEFWLFALGGLFVLVTLFLPKGVVGTAQHHL 360


>gi|332528969|ref|ZP_08404936.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
 gi|332041630|gb|EGI77989.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
          Length = 372

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 54/359 (15%), Positives = 102/359 (28%), Gaps = 38/359 (10%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQ-------KYIDSMGIQILIYVMFAWGLSIVV 60
           LN+      L A++  L+L   L              Y  ++  +I+ Y + A  + ++ 
Sbjct: 15  LNRRGWTAFLAALIAVLVLAPVLNLLVPDGHVFHMSNYTVALLGRIMCYAICALAMDLIW 74

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGA 105
           G  G+LSL   + +A+G Y   +                        W   P     S +
Sbjct: 75  GYTGILSLGHGLFFALGGYMMGMYLMRQIGRDGQYKSDMPDFMVFLNWKEFPWHWAFSDS 134

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
               + L  L                  + +           A + +  R          
Sbjct: 135 FVATLILIVLVPGLIAFVFGYFAFRSRIKGVYFSIITQALTFAAMLLFFRNETGFGGNNG 194

Query: 166 LIRFFRFPSSFVIYEIFMYYVLL--GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
              F R     +   + M   +L          +  WL         + IRD +      
Sbjct: 195 FTDFKRILGIPIGQGMRMMLFMLTGFTLLGFFLLGRWLMNAKFGRVLQAIRDAESRVMFS 254

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
               +  KL+ + +S+   G+AGA +      I+P     + +I +     +GG  +L  
Sbjct: 255 GYNPLGYKLTIWTLSAVMCGIAGALYVPQVGIINPGEMSPANSIEIAIWAAVGGRATLIG 314

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 ++ G                     +F       +     LV L     ++ L
Sbjct: 315 PIVGAFVVNGAKSWLTA--------------AFPAFWLYFLGGLFILVTLFLPDGIVGL 359


>gi|153855724|ref|ZP_01996738.1| hypothetical protein DORLON_02756 [Dorea longicatena DSM 13814]
 gi|149751947|gb|EDM61878.1| hypothetical protein DORLON_02756 [Dorea longicatena DSM 13814]
          Length = 550

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/328 (10%), Positives = 88/328 (26%), Gaps = 9/328 (2%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+ F  +   Y  I+ +   +  +  F+      +   I ++  Q    +  A G++ ++
Sbjct: 217 MTQFLYKNGLYIVIIMIFIALCIITPFVKNTQLFTTTNILNILQQASPRMFLALGVAGLI 276

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
              G   L+      +G  +  I+      +  +   V      A      L        
Sbjct: 277 LLTG-TDLSVGRMVGMGMVTATIIMHNGINTGTVFGHVFDFSGMAPASRAILALCVCILF 335

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
               A      + +  +  +         + +   + +    V         P+ F+   
Sbjct: 336 TTVFAMTAGFFMARFKMHPFISTM--ANMLIIFGLVTYATKGVSFGAIDPTIPNIFIPQA 393

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
                ++L      A +     +T        +  N +A      ++    + AF ++  
Sbjct: 394 GRFPMIILWAVVAIAVVWFIWNKTTFGKNLYAVGGNPEAAAVSGISVFKVTMGAFILAGI 453

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGV 294
             G                 +    ++  I+  ++      GG+  +S +     I   +
Sbjct: 454 LYGFGSWLECVRMVGSGSAAYGQGWDMDAIAACVVGGVSFTGGIGKISGVVTGVLIFTSL 513

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                 +        +          T 
Sbjct: 514 TYSLTVLGIDTNLQFIFEGIIILAAVTL 541


>gi|194289572|ref|YP_002005479.1| branched-chain amino acid ABC transporter [Cupriavidus taiwanensis
           LMG 19424]
 gi|193223407|emb|CAQ69412.1| putative ABC-type branched-chain amino acid transporter, membrane
           component [Cupriavidus taiwanensis LMG 19424]
          Length = 437

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 50/337 (14%), Positives = 117/337 (34%), Gaps = 32/337 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +   +     +L+ L L    +  +  ++  Q+ I ++FA   ++++G  G+LS  
Sbjct: 21  RPLNLARWIIWSLTVLVMLVLPLIFTGGFAITLMSQMGIMIIFALSYNMLLGQTGMLSFG 80

Query: 70  CVIAYAIGAYS-----YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
             +   +GA+       ++   +  L + +L  V  +     G+I G  + K  G   A+
Sbjct: 81  HAVYSGLGAFIAVHVLNMVGAGKVWLPVSMLPLVGGLAGAFFGVIFGYVTTKKAGTTFAM 140

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            T+ + E+     + +     G+ GI              + +    F          +Y
Sbjct: 141 ITMGIGEMVFASSLMFPEFFGGEGGIS------------TNRVVGDPFLGITFGPGRQVY 188

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y++   C LS   +    +T +      +RDN +    +       +     +S+ F G+
Sbjct: 189 YLIAAWCLLSMVAMYAWTQTPLGRIANAVRDNPERVEFIGYNTQRVRYLVLILSAFFAGI 248

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           +GA  A + + +S +      +  V+  V +GG            + +        +   
Sbjct: 249 SGALAAINFEIVSAENVSAVRSGGVLLAVFIGGAGVFFGPIIGAVVFVLFAVALSDLTKA 308

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +                  + +   L+++     L  
Sbjct: 309 W---------------LLYLGLFFVLMVMFVPGGLAS 330


>gi|327480109|gb|AEA83419.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas stutzeri DSM 4166]
          Length = 396

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 51/349 (14%), Positives = 97/349 (27%), Gaps = 36/349 (10%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             +  +    L L +       +  +M  + L Y   A GL +  G  G+LSL   I + 
Sbjct: 14  GAIGFLILAALLLVVFPLALDAFRLNMIGKYLTYAFVAVGLVLCWGYGGILSLGQGIFFG 73

Query: 76  IGAYSYVILGS----------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           +G Y   +                         W  +    +       I          
Sbjct: 74  LGGYCMAMFLKLEASDPQSTKIQSTPGIPDFMDWNQLTELPLFWEPFHSIGFTLVAVVAV 133

Query: 120 DYLAIATLIMSEI------FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
             L    + ++            ++           I     L      +  L     + 
Sbjct: 134 PMLLALIVGLAMFKRRVGDVYFSIVTQAIAAILTILIIGQQGLTGGVNGITDLRTLMGWD 193

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
                 +  +Y+V   +      I  ++  + +      +RD ++        +   K+ 
Sbjct: 194 IRSNEAKTLLYFVCACLLLGCILIGRFILASKLGRLLMAMRDKEERVRFSGYDVASFKIF 253

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            F V++AF G+ GA F      +SP       +I ++    +GG  SL        ++  
Sbjct: 254 VFCVAAAFAGIGGALFTLQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGALLVNY 313

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              L              F  SF       M      V++   + L  L
Sbjct: 314 GKTL--------------FSESFPELWLYFMGGLFIAVVMYFPNGLAGL 348


>gi|304391056|ref|ZP_07373008.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Mobiluncus curtisii
           subsp. curtisii ATCC 35241]
 gi|315656168|ref|ZP_07909059.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Mobiluncus curtisii
           subsp. holmesii ATCC 35242]
 gi|304325939|gb|EFL93185.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Mobiluncus curtisii
           subsp. curtisii ATCC 35241]
 gi|315493170|gb|EFU82770.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Mobiluncus curtisii
           subsp. holmesii ATCC 35242]
          Length = 294

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 102/303 (33%), Gaps = 23/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++        +GAY+         L  +  +  
Sbjct: 8   LINGLSLGSIYALIALGYTMVYGIIQLINFAHGDVLMVGAYAGFAGMVLLHLDPFTSLLA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I    GM++   + K       IA LI +     ++        G        +  +
Sbjct: 68  AMIICAILGMLIERLAYKPLRHSTRIAVLITAIGMSLLIEYVTMYFVGAEARAYPAQTGW 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           LG           +    V   +    +++    L   +   +++T I  A R +  +Q 
Sbjct: 128 LGA---------SYHFGGVNLSMIQIIIVVVSVILMVVLQFIIKKTRIGKAMRAVSQDQD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +  ++       FA+ SA  G AG  +      I+P M      +      +LGG+
Sbjct: 179 AAKLMGISVDNTISFTFALGSALAGAAGVLWGLYYTSITPLM-GIMPGLKAFVAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        ++  +  +   +    F     F             + L +V++ +   
Sbjct: 238 GLIPGALVGGYLVGLLETIVNSLGLSTFRDAAVF-------------LVLIIVLIFKPAG 284

Query: 339 LLR 341
           +L 
Sbjct: 285 ILG 287


>gi|291571753|dbj|BAI94025.1| urea ABC transporter permease protein [Arthrospira platensis
           NIES-39]
          Length = 387

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/324 (12%), Positives = 86/324 (26%), Gaps = 28/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 +   +  + L   + A G+ ++ G  GLLSL   I +++G Y+  +        
Sbjct: 37  PLALPVFRLKLLGRFLSLCIVALGIDLIWGYTGLLSLGHGIFFSLGGYALAMYLQLQLPE 96

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             +                                  +       L+    I      I 
Sbjct: 97  GQIPDFFMLYGVENLPWFWEPFYSFPFTLVAIFLIPGIVAAILGYLVFRNRIKGVYFSIL 156

Query: 152 VADRLYFLGTTVRSL--------------IRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
               L                           F   +     ++  Y + + +  L   +
Sbjct: 157 TQAALLVFFHLFNGQQKYINGTNGLKTDTTMIFGTQAGSPAAQLVFYELSILLMILIYLL 216

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             WL           IRD++             K+  FA+S A  G++GA +      I+
Sbjct: 217 CRWLTSGRFGRLLVAIRDDENRVRFSGYDPTGFKVLVFAISGAIAGISGALYTVQSGIIT 276

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P   + + +I ++  V +GG  +L      T ++                        F 
Sbjct: 277 PSFMEVAFSIEMVIWVAVGGRATLVGAILGTVLVRLGQTFLSE--------------QFP 322

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                       +V+ +    ++ 
Sbjct: 323 QVWLFFQGALFLIVVTVLPSGIVG 346


>gi|218460378|ref|ZP_03500469.1| probable branched-chain amino acid ABC transporter, permease
           protein [Rhizobium etli Kim 5]
          Length = 329

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 58/310 (18%), Positives = 122/310 (39%), Gaps = 29/310 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS      +   AY        +GL   L I +  +
Sbjct: 42  FLMKLLCFALFACAFNLLLGYTGLLSFGHATFFGGAAYFTAYTVKSWGLPPELGILIGVV 101

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G++MG  +++ +G Y A+ TL +S++F    ++ +                    
Sbjct: 102 GAALLGLVMGFFAIRRQGIYFAMITLALSQMFFFFCLQAEFTEG--------------ED 147

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++S+ R   F    +     MYY +L +  +   II     +      ++IR+N+    
Sbjct: 148 GIQSVPRGHLFGFIDLSNSTNMYYFVLAVFLIGILIIWRFINSPFGMILKSIRENENRAT 207

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL  ++   KL AF +S+A  G+AGA  +      +     +  +  VI + +LGG+ +L
Sbjct: 208 SLGYSVARYKLGAFVMSAALAGLAGAMKSLVFQFATLTDVAWQMSGEVILMTLLGGIGTL 267

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +++ +        F                 T +  +   + +L+    ++ 
Sbjct: 268 VGPLFGAGLVVALQNYLATSEFPV---------------TIITGVVFMICVLIFRRGIIG 312

Query: 342 LRTPSNFLER 351
               S    +
Sbjct: 313 EFYASRLGRK 322


>gi|299133577|ref|ZP_07026771.1| inner-membrane translocator [Afipia sp. 1NLS2]
 gi|298591413|gb|EFI51614.1| inner-membrane translocator [Afipia sp. 1NLS2]
          Length = 315

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 56/299 (18%), Positives = 105/299 (35%), Gaps = 24/299 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                  +   GI  L+  + A G +I+ G  G  S      Y +G+Y   I   ++ L 
Sbjct: 20  PWFGSDVLVQFGINALLLAVLAQGWNIIGGYTGYASFGNSAFYGLGSYGVGIAMVQWDLP 79

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             + +    ++S    +++GLP L+ +G Y AIATL ++++   I+   K          
Sbjct: 80  FGVGLAFGVLLSVVFAILLGLPVLRLKGHYFAIATLALAQVMAAIVSNVKL--------- 130

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                           +        +  ++  Y + L +       I WL R+       
Sbjct: 131 --------------AGQNIGLVLPPLNNDMLFYELALALLVAVTLTIWWLSRSKFGFGLI 176

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVI 270
            IR+N++    +       K+ AFA+S  F  +AG   A     I P+  F  S N+ +I
Sbjct: 177 AIRENEEGAKVMGVNTTLYKVMAFALSGVFSALAGGIHAYWVTFIDPESAFDISLNVKMI 236

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            + + GG  ++         L  + E+                    +      +  + 
Sbjct: 237 IMAVFGGPGTVLGPIVGALSLSAISEVLSSEVTSIAGLFFGVVVVAAVVLMPRGLADII 295


>gi|319937170|ref|ZP_08011577.1| inner-membrane translocator [Coprobacillus sp. 29_1]
 gi|319807536|gb|EFW04129.1| inner-membrane translocator [Coprobacillus sp. 29_1]
          Length = 290

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 98/303 (32%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G   +++        +GAY   ++ S       + I  
Sbjct: 7   MINGLSTGGMYALVAIGYTMVYGIAKMINFAHGEIIMVGAYLTYVVFSVL-GMPVVAIIA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S       G++    + K   +  +++ LI +     +L     I  G A          
Sbjct: 66  SIAGCALLGVVTEKVAYKPLRNSSSLSVLITAIGVSYLLQNLFLILFGSA---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T    +   +     +         L+     +  ++L++ +T +  A R + +++ 
Sbjct: 116 -AITFPDFLPSGQLELLGLSISYVSLLSLILTFACTILLLLFINKTKLGKAMRAVSEDKG 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S    +AG  +  S   I+P        I      +LGG+
Sbjct: 175 AAELMGINVNNTISMTFAIGSGLGAVAGIIYGLSYSLINPY-LGAMLGIKAFIAAVLGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+              F+  + F               L  ++L++   
Sbjct: 234 GSIQGAMIGGLIIGVAEAFTVSYISSTFSDAVVFG-------------ILIFILLVKPAG 280

Query: 339 LLR 341
           L  
Sbjct: 281 LFG 283


>gi|89902148|ref|YP_524619.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89346885|gb|ABD71088.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 367

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 46/347 (13%), Positives = 95/347 (27%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I+         LL           Y  ++  +I+ Y + A  + ++ G  G+LSL   + 
Sbjct: 26  IVVCAVAPALNLLVPKDSLFHLSDYAVALVGKIMCYAICALAMDLIWGYTGILSLGHGVF 85

Query: 74  YAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           +A+G Y+  +                        W  +P     S +    + L      
Sbjct: 86  FALGGYAMGMYLMRQIGLEGNYKSNLPDFMVFLDWKTLPWHWTFSDSFIATLFLVLAVPG 145

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
                          + +           A + +  R             F R     + 
Sbjct: 146 LVAFVFGYFAFRSRIKGVYFSIITQAMTFAAMLLFFRNETGFGGNNGFTDFKRILGIPIA 205

Query: 179 YEIFMYYVLL---GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  + +    +      +  WL         + +RD +        + +  KL+ +
Sbjct: 206 TPGMRMLLFVLTGVILLGFFLLARWLVAAKFGRVLQAVRDAETRVMFSGYSPLGYKLTIW 265

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            +S+   G+AGA +      I+P     + +I +     +GG  SL        I+ G  
Sbjct: 266 TISAMMCGVAGALYVPQVGIINPSEMSPANSIEIAIWAAVGGRASLIGPIVGAFIVNGAK 325

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                              ++       +      V L     ++ L
Sbjct: 326 SWLT--------------VAYPEFWLYFLGALFIGVTLFLPDGVVGL 358


>gi|159900317|ref|YP_001546564.1| inner-membrane translocator [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893356|gb|ABX06436.1| inner-membrane translocator [Herpetosiphon aurantiacus ATCC 23779]
          Length = 343

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 59/335 (17%), Positives = 120/335 (35%), Gaps = 20/335 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + +   +L L+A+   L    F  A  + ++   + IQI I  ++A    +++G  G++S
Sbjct: 1   MQRLRPLLPLVAIG-GLASLPFAFAADTTRFWQGVFIQIFILAIYALSYDLLMGYTGMIS 59

Query: 68  LNCVIAYAIGAYSYVILGSRYGLS-IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
               + +  G Y+  IL  +     + ++I    ++    G  +G  SL+  G Y ++ T
Sbjct: 60  FGHALFFGAGGYTAAILLRQAEPPSMLIVIAAVIVVGATIGAAVGALSLRVSGVYFSMIT 119

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L ++EI   +                       G  +               Y +  Y++
Sbjct: 120 LALAEIAFILFKA-----------DDPKLKPITGGEIGLQGIVVPAAIDATTYRLRFYFL 168

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            L            L  +     +  IR+N+    +L    +  KL A A+SS    +AG
Sbjct: 169 TLACMVGLYYAARRLINSPTGRVFVAIRENEPRATALGYNTLHFKLLATAISSTIAALAG 228

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                     S +M   +  I  + + I+GG+ +L       A +  +     G      
Sbjct: 229 MLMVLYEKSASFEMLSVNLTIQALLMTIIGGIGTLIGPMLGAATIRLLDHGLKG------ 282

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              ++      +R   +  I   +++L     L+ 
Sbjct: 283 -EFMQALLPAWLRPDLVFGIVYVVLVLFFPAGLMG 316


>gi|15806058|ref|NP_294761.1| branched-chain amino acid ABC transporter permease [Deinococcus
           radiodurans R1]
 gi|6458768|gb|AAF10612.1|AE001955_4 branched-chain amino acid ABC transporter, permease protein
           [Deinococcus radiodurans R1]
          Length = 356

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 101/307 (32%), Gaps = 10/307 (3%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-------SRYGLSIWLL 95
               ++Y + A G ++V G L L++      +  G      +            L + + 
Sbjct: 45  LSLGVLYAIIALGYTMVYGVLQLINFAHSEVFITGGVVAYFVFEALKESPMNGLLKLLIA 104

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
              +  +SG   +++   + +       +  LI +     IL     +  G  G++    
Sbjct: 105 ALAAMAVSGGLNVLIERLAYRPIRGAQRLVPLITAIGVSLILQDLLRLIVGLRGLFDLS- 163

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           +         + +      S +  ++    +++    +   + L +  T +  A R +  
Sbjct: 164 VTLPQGFADPITKVGGVNISVLNLQVKDIILIVVAGLMLIGLNLLVNHTRLGRAIRAVAH 223

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++    +           F +  A  G+ GA FA     ++         I   +  +L
Sbjct: 224 DRQTSGLMGIDSNRIISLTFLIGGALGGLGGAMFAMKYQALNAYS-GMVPGIKAFTAAVL 282

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFY-YFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           GG+ ++        +L  +  L   ++ +     L       +        +AL L++  
Sbjct: 283 GGIGNIPGAVLGGLVLGWLETLLGTIDLFQVVPGLGWLKYITSDYKDLGAFLALLLILFF 342

Query: 335 RSHSLLR 341
           +   LL 
Sbjct: 343 KPAGLLG 349


>gi|327401812|ref|YP_004342651.1| ABC transporter integral membrane subunit [Archaeoglobus veneficus
           SNP6]
 gi|327317320|gb|AEA47936.1| ABC-type transporter, integral membrane subunit [Archaeoglobus
           veneficus SNP6]
          Length = 331

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 69/329 (20%), Positives = 126/329 (38%), Gaps = 30/329 (9%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            +  +  ++  L +    S   +  M     I+V++A    +V G  G  +L   +   I
Sbjct: 12  AVMAIAAIIAILAVLPFFSSSSVIYMLGLAFIFVVYAVSWDVVAGYTGQTNLGHTVFIGI 71

Query: 77  GAYSYVILGSRYG------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           GAY+  +L + +         IWL IP   + +   G+ +G   L+ +G YLA+ T I+ 
Sbjct: 72  GAYTTALLQNSHRLGLDISAPIWLTIPAGGIAALLFGLGIGAVCLRLKGYYLALVTAILP 131

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            IF  +   +  +  G  G  V                   F  +        YY+ L  
Sbjct: 132 LIFIQLANIYSGVFGGYEGFSV------------------GFGKALASDVRLRYYIALAF 173

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
            F+S + +  L  + I    R +RD+++   ++   ++  KL AF VS+ F G+AGA   
Sbjct: 174 MFISIAAMYVLVNSRIGVKLRAVRDDEELAEAVGIDVVKYKLLAFCVSAFFAGLAGAVTV 233

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             R  +  D+F     + +I  VI+GG+ +          +             +     
Sbjct: 234 HYRLTVGVDLFDIPLMLAIILGVIIGGIGTFYGAVFGGFAIYIAKNWI------FRQIAE 287

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSL 339
                F +    L+   L ++IL     +
Sbjct: 288 TISPVFPVSDDILLYALLIVLILKAPEGI 316


>gi|326315058|ref|YP_004232730.1| urea ABC transporter permease UrtC [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323371894|gb|ADX44163.1| urea ABC transporter, permease protein UrtC [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 406

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 49/334 (14%), Positives = 102/334 (30%), Gaps = 36/334 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             +  ++  + L Y   A GL +V G  G+LSL   + + +G Y+  +            
Sbjct: 32  DVFRLNLVGKYLTYAFVAIGLVMVWGYGGVLSLGQGVFFGLGGYAMAMFLKLEASDPIST 91

Query: 96  IPVSAMISGACGMIMGL-----PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              S            +       + F+    A+A +++       ++ +        G+
Sbjct: 92  KIQSTPGIPDFMDWNQITALPSFWVPFKSLPFALAAVVVLPTLLAWIVSFAMFKRRVGGV 151

Query: 151 YVA-----------------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           Y A                          +  L   + + +     ++ +YYV + +   
Sbjct: 152 YFAIITQAVALICTVLIIGQQGYTGGVNGMTDLKTLWGWDTRTDSAKVILYYVCVALLVA 211

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           S  +  +++ + +      +RD +         +   K+  F +++A  G+ GA F    
Sbjct: 212 SIVLCRYIQTSKLGTLLLAMRDKEDRVRFSGYDVANFKVFTFCLAAALSGIGGALFTLQV 271

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             +SP       +I ++    +GG  SL        ++                    F 
Sbjct: 272 GFMSPSFVGIVPSIEMVIYAAVGGRMSLVGAVYGALLVNAGKTY--------------FS 317

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
            SF      LM      V +     L  L     
Sbjct: 318 ESFPDLWLFLMAALFIGVTMAFPMGLAGLWEERI 351


>gi|288962483|ref|YP_003452778.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288962871|ref|YP_003453165.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288914749|dbj|BAI76234.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288915137|dbj|BAI76621.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 301

 Score = 77.6 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 89/304 (29%), Gaps = 16/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G +G+++      Y IGA+  +I     G      +P+
Sbjct: 8   LINGLSLGAIYGLIAIGYTMVYGIIGMINFAHGEIYMIGAFVALITFLAIGALGITWVPL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I     M+                      +    LI    ++          +   
Sbjct: 68  ALLIMLVASMLFTSVYGWTVERIAYRPLRSSPRLAP--LISAIGMSIFLQNYIQILQGAR 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L          V         ++    L     L + RT++  A R    ++K
Sbjct: 126 SKPLQPILPGNLTLMDGAVSVSYVRLATIIITLVLMVGFTLLINRTSLGRAQRACEQDKK 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       F + +A   +AG         I      F   +   +  +LGG+
Sbjct: 186 MAGLLGVNVDRVISLTFVMGAALAAVAGMMVLLIYGVIDFY-IGFLAGVKSFTAAVLGGV 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        ++  +     G     +  +  F               L LV++ R   
Sbjct: 245 GSLPGAMLGGVVIGLIEAFWSGYVGSEWKDVATFS-------------ILVLVLIFRPTG 291

Query: 339 LLRL 342
           LL  
Sbjct: 292 LLGR 295


>gi|83591317|ref|YP_431326.1| inner-membrane translocator [Moorella thermoacetica ATCC 39073]
 gi|83574231|gb|ABC20783.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Moorella thermoacetica ATCC 39073]
          Length = 302

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 86/289 (29%), Gaps = 7/289 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A G ++V G + L++         GAY    +     L+IW    +
Sbjct: 13  IINGLSLGSIYALIALGYTMVYGIIQLINFAHGDIMMAGAYIAFFVVVYLKLNIWWAFLI 72

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S + S   G+++   + K   +   +A LI +      L     +  G         L  
Sbjct: 73  SMIGSALLGVLIERVAYKPLRNATRLAPLITAIGMSLFLENGGLMVLGTDIRSYPGGL-- 130

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +           +        +L     +   +   +  T    A R +  +  
Sbjct: 131 ----ITNAQLPLVIFGMRLTATTLQLLILAITIVMMIILQYIVHYTRAGKAMRAVSYDAD 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SAF  +AG       + I P M      +      ++GG+
Sbjct: 187 AARLMGINVDNTISLTFALGSAFAAVAGILLGLYYNTIQPLM-GIMPGLKAFVAAVIGGI 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +         L     +  G         + F     +       + 
Sbjct: 246 GLIPGAMVGGFALGIFETMVSGYWSSNLRDPIVFLLLILILLVKPAGLL 294


>gi|83944068|ref|ZP_00956524.1| inner-membrane translocator [Sulfitobacter sp. EE-36]
 gi|83844935|gb|EAP82816.1| inner-membrane translocator [Sulfitobacter sp. EE-36]
          Length = 446

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 50/340 (14%), Positives = 117/340 (34%), Gaps = 31/340 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R+     +L L   V   ++   L    +     ++  Q+ I ++FA   ++++G  G+L
Sbjct: 30  RMRSGSLVLTLAPWVIASVVLAILPMVFTNNSALTIMNQMSITIVFALAYNMLLGQGGML 89

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY----L 122
           S    +   +G ++ + + +       + + +  +  G  GM + +    F         
Sbjct: 90  SFGHAVYAGVGGFACMHIMNMSDFFSTIPLVILPVFGGLFGMGLAMIVGAFSTRNAGTVF 149

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ +L + E+     +       G+ GI                     F     + +I 
Sbjct: 150 AMISLGVGELIAACSVIIVAFFGGEEGIS------------GDRTYAQPFFGVEFLQQIE 197

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +YY+  G   +SA+++    RT +      +RDN +    L  +  + +  +F  S  F 
Sbjct: 198 VYYLTAGWVVISAALMYLWSRTPVGRMANAVRDNPERAEFLGYSSRWVRFYSFVASGFFA 257

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G++G  FA + + ++ +    + + I++ +  LGG+               +  +     
Sbjct: 258 GVSGGLFAINYEILTEENLNTASSGIILLVTFLGGVGFFFGPIIGAIAFTLLQTVLS--- 314

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                                  +     ++     L  L
Sbjct: 315 ------------LSTELWAFYAGVLFLSTVMFFPGGLAGL 342


>gi|293393961|ref|ZP_06638267.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Serratia odorifera DSM
           4582]
 gi|291423521|gb|EFE96744.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Serratia odorifera DSM
           4582]
          Length = 308

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 84/305 (27%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I  +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIAIAALMMMGIDASWL 71

Query: 99  SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
                    +++                      I     I           +    R  
Sbjct: 72  LIGAGFLASIVIASAYGWSIERVAYKPVRHSKRLIALISAIGMSIFLQNYVSLTQGSRDV 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + V                      + L       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLVTGRWVLGESNGFAATVSTMQIIIWLVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L     L        +  ++ F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLVLGVAEALTSAYLSAEYKDVVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|94312908|ref|YP_586117.1| ABC transporter permease [Cupriavidus metallidurans CH34]
 gi|93356760|gb|ABF10848.1| ABC-type transport system, permease component [Cupriavidus
           metallidurans CH34]
          Length = 287

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 90/307 (29%), Gaps = 27/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      +Y + A GL++V G L + +      Y  GAY      +  G++ WL +  
Sbjct: 8   FLNGLTLGGVYSLVALGLTLVYGILHVPNFAHGAFYMAGAYVSYYAMTTLGMNYWLAMLA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A++     M+              I  +I +      L        G     +      
Sbjct: 68  AAVVVAMLSMLADRLVFYPLRHAPEIHDMIAAIGILLFLEAGAQALWGADFHRMPTP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +   +    +++    L   + L+L RT   +    +  N++
Sbjct: 125 ---------YGQMVEIFGLTAPLQRLLIIVAAFGLMVLLHLFLTRTVTGSTIVAMAQNRE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +    +   L  FA+S A   +A   +A     +               I+ILGGM
Sbjct: 176 GAALVGIDAMRVTLLVFAISGALAAIAATLYAP--INLVYPSMGNLVITKAFVIIILGGM 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+                               +  + L +++ +R   
Sbjct: 234 GSIPGAIVGGLIIGMAESFGGFYIS-------------TDYKDIIAFLLLVIILSVRPQG 280

Query: 339 LLRLRTP 345
           L   +T 
Sbjct: 281 LFAGKTA 287


>gi|238793538|ref|ZP_04637162.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Yersinia intermedia ATCC 29909]
 gi|238727128|gb|EEQ18658.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Yersinia intermedia ATCC 29909]
          Length = 308

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 86/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDASWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
               +    +++                     +   I  I           +    R  
Sbjct: 72  LIGAAFLVSIVIASAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + V                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLVTGQWTLAETNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     L        +   + F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLILGVAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|58616658|ref|YP_195867.1| putative membrane spanning protein [Achromobacter xylosoxidans A8]
 gi|311109726|ref|YP_003982578.1| inner-membrane translocator 73 [Achromobacter xylosoxidans A8]
 gi|58416249|emb|CAI47843.1| putative membrane spanning protein [Achromobacter xylosoxidans]
 gi|310764415|gb|ADP19863.1| inner-membrane translocator 73 [Achromobacter xylosoxidans A8]
          Length = 332

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 59/314 (18%), Positives = 113/314 (35%), Gaps = 15/314 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  +A++  L L  F G      +  +   ++LIY +    L+I +G  GL+SL   +  
Sbjct: 12  LVPVAIILLLALVPFWGYFTDSTFYVAFYARVLIYAIAVVALNIALGFGGLVSLGHALFM 71

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IGAYS  I       S W+ + +  ++SG  G I G  SL+  G    + TL  +++  
Sbjct: 72  GIGAYSVAIPSFYGIDSGWVHLFICLLVSGLLGYITGAISLRTTGIGFIMITLAFAQMGY 131

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +  K                       S+    +           +Y V   +  LS
Sbjct: 132 FLFVSLKQYGG---------------DDGTSIANTSKMLGLDFGGVYTVYGVAFVLLVLS 176

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 LR +      R  R N +   ++        L ++ +S+    +AG   A    
Sbjct: 177 TWWTAKLRVSPFGMVLRGARQNIRRVNAIGFQAQQYLLVSYVLSAMLCSVAGFLLANLNA 236

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             SP    +  +  ++ +++LGG+ ++          +G+ E+      ++         
Sbjct: 237 FASPTTLSWIISGDLVVMLVLGGIGTVFGPLLGALAFLGLEEVLKMFTTHWLAVFGLAIV 296

Query: 315 SFNMRHTTLMVIAL 328
              +     +V  L
Sbjct: 297 VIGLVGKAGIVGFL 310


>gi|55376687|ref|YP_134538.1| branched-chain amino acid ABC transporter permease protein
           [Haloarcula marismortui ATCC 43049]
 gi|55229412|gb|AAV44832.1| branched-chain amino acid ABC transporter permease protein
           [Haloarcula marismortui ATCC 43049]
          Length = 312

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 95/291 (32%), Gaps = 6/291 (2%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                     V+ A GL+I+ G +G+++L       IGAY+  +  ++ GL + + + V 
Sbjct: 9   LQFLDSFAFIVLAAAGLAIIFGIMGVINLAHGEFILIGAYTATLAVTQLGLPLVVAMLVG 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA----DR 155
            +++G  G++     +            +  +I + +  +         G+ +      R
Sbjct: 69  GVVTGLFGILTERVIISGAWPNWVSQRTLGRDIIEPLYNRLADSMVATFGLSLILTQGAR 128

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           + F  +  +    F         Y  +   +      L  +      RT      R    
Sbjct: 129 IRFGNSIDQIATPFGAISYGAFSYSTYRIVLAGVSIGLLLATYYLFTRTDFGMRARATIQ 188

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++   ++        +  F + SA  G+ GA FA                +     V++
Sbjct: 189 DKETAQAMGVNTDRMYMLTFGIGSALAGLTGALFAPVISM--QPTLGDQFLVEAFVAVVV 246

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           GG + +   A +  +L  ++     +   +   +     +          I
Sbjct: 247 GGPSVVLGTALSGGVLGAILATFSNLYGTFIGRIALLVAALIALRFLPDGI 297


>gi|89069330|ref|ZP_01156689.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
 gi|89045097|gb|EAR51168.1| branched-chain amino acid ABC transporter,  permease protein
           [Oceanicola granulosus HTCC2516]
          Length = 345

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 55/336 (16%), Positives = 119/336 (35%), Gaps = 9/336 (2%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           ++   ++  L +   +LL + L A   + +   +     + ++   GL   +G+      
Sbjct: 7   SQRRGLIGALLLSLLILLIVGLYALWGESWQARVLYAAFVNLIVVIGLQTFMGNANFAVF 66

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +      I AY+  I  +   +    L      ++           +      L    + 
Sbjct: 67  SHAAFMGIAAYAAAICVTPVAMKAVSLPDAPWGLNAFE--------MSPLASALVALGIT 118

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
            +      L   +    G   + +A  +      +     F    + F I  IF    + 
Sbjct: 119 GTLGLLTGLFMSRLTGVGVTIVSIAILVIVHSIFLHRTDIFKGNQALFGIPRIFGLTHVT 178

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  ++       R +A+    R   D++    ++   +  A+L A+ VS+ F   AG  
Sbjct: 179 VLAIVAIFAARLFRESAVGLRLRAAADDEIGARAMGVDVHRARLVAWVVSTLFFAAAGIA 238

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +A     IS   F F+   + ++++ILGG+ S+S     T ++   +EL   +      +
Sbjct: 239 YAFFLGTISARPFYFNFVFLTVAMLILGGLRSVSGAVFGTLLITIGLELVRWLETGPTLA 298

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
            +K           L+ + +  V+  R H L+  R 
Sbjct: 299 GVKLP-QMLGLSGLLLGVVIVAVMAFRPHGLMGNRE 333


>gi|240140118|ref|YP_002964595.1| putative branched-chain amino acid ABC transporter, permease
           protein [Methylobacterium extorquens AM1]
 gi|254562557|ref|YP_003069652.1| branched-chain amino acid ABC transporter permease
           [Methylobacterium extorquens DM4]
 gi|240010092|gb|ACS41318.1| putative branched-chain amino acid ABC transporter, permease
           protein [Methylobacterium extorquens AM1]
 gi|254269835|emb|CAX25813.1| putative branched-chain amino acid ABC transporter, permease
           protein [Methylobacterium extorquens DM4]
          Length = 385

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/362 (12%), Positives = 100/362 (27%), Gaps = 36/362 (9%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           N + K +  +++     + L +       +  ++  + L Y   A GL I  G  G+LSL
Sbjct: 13  NPFMKPVEWVSLALLAGVILVVLPLVLDGFRLNLVGKYLTYAFVALGLVICWGYAGILSL 72

Query: 69  NCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
              + + +G Y   +                       +                   L 
Sbjct: 73  GQGVFFGLGGYCMAMYLKLEASSVENTKIQSTPGIPDFMDWNQITELPWFWHPFQSLPLT 132

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI--------- 167
                                 +            +A  L  L    +            
Sbjct: 133 LLLVVAVPVAFAFLISVAMFKRRVGGTYFAIITQAIAAILTILIVGQQGYTGGINGITDL 192

Query: 168 -RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                +       +  +Y+V  G+      +  +++++ +      +R+ +        +
Sbjct: 193 RTLHGWDIRQDSAKFVLYFVNGGLLIGCILMAQYVKKSKLGRILVAMREKEDRVRFSGYS 252

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +   K+ A+ +++AF  + GA F      +SP       ++ ++    +GG  SL     
Sbjct: 253 VAGFKVFAYCLAAAFAAIGGAMFTLQVGFMSPSFVGIVPSVEMVIYTAVGGRLSLFGAVW 312

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
            T ++                    F  SF       +      V+L+  + L  +    
Sbjct: 313 GTLLVNWAKT--------------SFSESFPDLWLFGLGGLFIAVVLIFPNGLAGIWREH 358

Query: 347 NF 348
             
Sbjct: 359 IE 360


>gi|166362771|ref|YP_001655044.1| amino acid transport system permease protein [Microcystis
           aeruginosa NIES-843]
 gi|166085144|dbj|BAF99851.1| amino acid transport system permease protein [Microcystis
           aeruginosa NIES-843]
          Length = 371

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 64/372 (17%), Positives = 121/372 (32%), Gaps = 61/372 (16%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S+ I   IY +FA GL++  G  GL++   V    +GAY+ V+L  +    I+  I
Sbjct: 3   DYLVSLTIWAGIYAIFALGLNLQWGFTGLINFGHVAFATLGAYATVLLTLQGVPMIFAAI 62

Query: 97  PVSAMIS-----------------------------------------GACGMIMGLPSL 115
             + + +                                         G+ G+      L
Sbjct: 63  VGAILGALLGLAIGFSTLRLRADYLAIVTIGVSELIRLLVLNEDWLTKGSFGLQRYPLPL 122

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                +     +I       I   W+   N +     A ++               + S 
Sbjct: 123 DINPSFAVKLLIIALFTLLAIFALWQLGRNLQRQWREAGQISGKSYQPTQKRALIFWGSL 182

Query: 176 FVIYEIFMYY-----------------VLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             I  +F+Y                  V+L +  L  + +  L R+      + IR++++
Sbjct: 183 GAIILLFLYINGVISLNDYNYKAGLMVVVLVLLALVYTGLELLLRSPWGRILKAIREDEE 242

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   + + KL +  +  A  G+AGAF A     I P  F+         I+ILGG 
Sbjct: 243 IPRALGKNVFWYKLQSLMLGGAIAGLAGAFLAWQLTTIYPTNFEPLLTFNAWIIIILGGS 302

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +       I      L   +        +  D         ++ + L ++++ R   
Sbjct: 303 GSNAGTLLGAVIFWAYDSLTRFILP---QLDIFNDSQLGALRIMIIGLLLMVLMIWRPQG 359

Query: 339 LLRLRTPSNFLE 350
           +L  +      +
Sbjct: 360 ILGKKEELTLGK 371


>gi|320538313|ref|ZP_08038194.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Treponema phagedenis F0421]
 gi|320144812|gb|EFW36547.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Treponema phagedenis F0421]
          Length = 294

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 51/310 (16%), Positives = 100/310 (32%), Gaps = 27/310 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLL 95
           + +      IY + A G ++V G + L++        +GAY    +   +    LS  + 
Sbjct: 6   LINGLSLGSIYALIALGYTMVYGIVLLINFAHGDVLMLGAYVGYYVLLTFGTSPLSFVIA 65

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           I  + ++  A G+I+   + +   +   + +LI +     IL     +            
Sbjct: 66  IGTAMVVCAAVGIIIERFAYRPLRNAPRLNSLITAIAVSLILQNGARVL----------P 115

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                      +   +              V+     L   +   +  T    A R +  
Sbjct: 116 FIGPDPRQFPTLPTVKISVGDFDISNIQLIVVSVSIGLMFLLNYIVNHTKAGKAMRAVSF 175

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   +  +I       FA+ SA     G  FA +  +I P M      +      +L
Sbjct: 176 DATAAGLMGVSINGIISFTFALGSALAAAGGVLFALAYPQIEPTM-GAMPGLKAFIAAVL 234

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S+        IL  V  L  G     +   + F               L +++L++
Sbjct: 235 GGIGSIPGAMIGGYILGLVETLTKGFLSSQYADAISFS-------------LLIIILLVK 281

Query: 336 SHSLLRLRTP 345
              L+  +T 
Sbjct: 282 PSGLMGKKTR 291


>gi|306845460|ref|ZP_07478034.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella sp. BO1]
 gi|306274203|gb|EFM56019.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella sp. BO1]
          Length = 570

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 105/288 (36%), Gaps = 21/288 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91
               KY   +   + I  +    L +V G  G++SL  +    +GA+ +  +        
Sbjct: 24  LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + + + +  + +   G+ +GLP+L+  G  LAI TL  +  F  +L              
Sbjct: 84  LAVWVLLGGLAAVPVGIAIGLPALRLHGINLAIVTLSFAAAFDTVLATIT---------- 133

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                       +   +  +L    + A ++ ++  + +  +W 
Sbjct: 134 ----------FPGQTSFTQVARPDLFASDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R +++A  +   +I  AKLSAFA+S+   G++G   A     +  + F   +++ + +
Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  + G            +++   EL   +N       + F       
Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291


>gi|303249298|ref|ZP_07335530.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
 gi|302489304|gb|EFL49261.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
          Length = 304

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 54/284 (19%), Positives = 111/284 (39%), Gaps = 13/284 (4%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +      L      +  Y      Q +        L+  +G  G +SL       IGAY+
Sbjct: 12  LAFFFGALLAVGLFTPGYQLIGVNQHMFLAANVLALNFCLGLGGQISLAQGAFAGIGAYA 71

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
            V+L +RY  +  ++ P   + +G    ++  P  +    +LA+ATL +S +  N+ +  
Sbjct: 72  SVLLHARYPGATLVIAPAVVLGTGLLAALISRPMERLGKGFLAMATLCVSLVCINVALTL 131

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T G AG             +    +        +  +   +++ + +  + A + L 
Sbjct: 132 ENVTGGSAG-------------LMVERKLALPGLGELAGDRVTFFLFVLLLAVGAYVFLA 178

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +R + +  A    RD++ A  SL      A+  +F +  AF   AG  +      ISP+ 
Sbjct: 179 VRDSRLGRALAACRDDRFAASSLGIDRPAARAVSFGLGGAFSAAAGLLYGHYTGFISPEQ 238

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           F    ++  +  +++GG  +L +   A  +L   +     +   
Sbjct: 239 FNLELSLKALLFLVIGGPGNLLRPLFAALVLETAMSHLQFLGDA 282


>gi|312113677|ref|YP_004011273.1| inner-membrane translocator [Rhodomicrobium vannielii ATCC 17100]
 gi|311218806|gb|ADP70174.1| inner-membrane translocator [Rhodomicrobium vannielii ATCC 17100]
          Length = 349

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 50/344 (14%), Positives = 110/344 (31%), Gaps = 24/344 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R  K        A+   L   L +           +  Q+L + +FA   ++++G +GL
Sbjct: 14  IRPFKASPSFLHAALFAGLAAVLAILPLLGL--YPFVLAQLLCFALFACAFNMLLGFVGL 71

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           LS    + + + +Y           ++   +P         G+    P L         A
Sbjct: 72  LSFGHAMFFGMASYVAAYTAKSGIAALPFWLPGVGRFDLPVGLPPFAPELAMLTGAAVAA 131

Query: 126 TLIMSEIFQNILIKWKPITNGK-------AGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
            L +      I  +                   +          ++ + R        + 
Sbjct: 132 VLGLIVGSLAIKRQGIYFAMITLALAQMVYFFSLQAPFTGGENGIQGVPRGHFLGFIDLR 191

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
            +  +YYV+  + F    +I  +  +      + IRDN+    SL       KL+ F +S
Sbjct: 192 DDTTLYYVVAAIFFAGFLLIYRIIHSPFGQVLKAIRDNEPRAISLGYRTQRYKLAVFVLS 251

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           +A  G+AG   A      +     ++ +  V+ + ++GGM ++        I+I +    
Sbjct: 252 AALAGLAGGMKAIVSQIATLSDVHWTMSGEVVLMTLVGGMGTIFGPVVGAVIVIAIQTYL 311

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             +                   T +      + +++    ++  
Sbjct: 312 NNL---------------GAWVTIVQGTIFVICVMLFREGIVGR 340


>gi|83955065|ref|ZP_00963721.1| inner-membrane translocator [Sulfitobacter sp. NAS-14.1]
 gi|83840394|gb|EAP79567.1| inner-membrane translocator [Sulfitobacter sp. NAS-14.1]
          Length = 446

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 50/340 (14%), Positives = 117/340 (34%), Gaps = 31/340 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R+     +L L   V   ++   L    +     ++  Q+ I ++FA   ++++G  G+L
Sbjct: 30  RMRSGSLVLTLAPWVIASVVLAILPMVFTNNSALTIMNQMSITIVFALAYNMLLGQGGML 89

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY----L 122
           S    +   +G ++ + + +       + + +  +  G  GM + +    F         
Sbjct: 90  SFGHAVYAGVGGFACMHIMNMSDFFSTIPLVILPVFGGLFGMGLAMIVGAFSTRNAGTVF 149

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A+ +L + E+     +       G+ GI                     F     + +I 
Sbjct: 150 AMISLGVGELIAACSVIIVAFFGGEEGIS------------GDRTYAQPFFGVEFLQQIE 197

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +YY+  G   +SA+++    RT +      +RDN +    L  +  + +  +F  S  F 
Sbjct: 198 VYYLTAGWVVISAALMYLWSRTPVGRMANAVRDNPERAEFLGYSSRWVRFYSFVASGFFA 257

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G++G  FA + + ++ +    + + I++ +  LGG+               +  +     
Sbjct: 258 GVSGGLFAINYEILTEENLNTASSGIILLVTFLGGVGFFFGPIIGAIAFTLLQTVLS--- 314

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                                  +     ++     L  L
Sbjct: 315 ------------LSTELWAFYAGVLFLSTVMFFPGGLAGL 342


>gi|22124338|ref|NP_667761.1| branched-chain amino acid transporter permease subunit LivH
           [Yersinia pestis KIM 10]
 gi|45442994|ref|NP_994533.1| branched-chain amino acid transporter permease subunit LivH
           [Yersinia pestis biovar Microtus str. 91001]
 gi|51594582|ref|YP_068773.1| branched-chain amino acid transporter permease subunit LivH
           [Yersinia pseudotuberculosis IP 32953]
 gi|108806215|ref|YP_650131.1| branched-chain amino acid transporter permease subunit LivH
           [Yersinia pestis Antiqua]
 gi|108810323|ref|YP_646090.1| branched-chain amino acid transporter permease subunit LivH
           [Yersinia pestis Nepal516]
 gi|145600674|ref|YP_001164750.1| branched-chain amino acid transporter permease subunit LivH
           [Yersinia pestis Pestoides F]
 gi|153947361|ref|YP_001399242.1| branched-chain amino acid ABC transporter permease [Yersinia
           pseudotuberculosis IP 31758]
 gi|153997136|ref|ZP_02022269.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis CA88-4125]
 gi|162419304|ref|YP_001607987.1| branched-chain amino acid transporter permease LivH [Yersinia
           pestis Angola]
 gi|165926228|ref|ZP_02222060.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939102|ref|ZP_02227653.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166011681|ref|ZP_02232579.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166213519|ref|ZP_02239554.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167401806|ref|ZP_02307294.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167421119|ref|ZP_02312872.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167426247|ref|ZP_02318000.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|170026184|ref|YP_001722689.1| branched-chain amino acid transporter permease subunit LivH
           [Yersinia pseudotuberculosis YPIII]
 gi|218930809|ref|YP_002348684.1| branched-chain amino acid transporter permease subunit LivH
           [Yersinia pestis CO92]
 gi|229837134|ref|ZP_04457299.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Yersinia pestis Pestoides A]
 gi|229839494|ref|ZP_04459653.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229900057|ref|ZP_04515194.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229900497|ref|ZP_04515626.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Yersinia pestis Nepal516]
 gi|270488852|ref|ZP_06205926.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Yersinia pestis KIM D27]
 gi|294505472|ref|YP_003569534.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis Z176003]
 gi|21957114|gb|AAM84012.1|AE013643_1 high-affinity branched-chain amino acid ABC transport system
           membrane permease [Yersinia pestis KIM 10]
 gi|45437861|gb|AAS63410.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis biovar Microtus str. 91001]
 gi|51587864|emb|CAH19467.1| ABC type branched-chain aa transport system, permease [Yersinia
           pseudotuberculosis IP 32953]
 gi|108773971|gb|ABG16490.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis Nepal516]
 gi|108778128|gb|ABG12186.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis Antiqua]
 gi|115349420|emb|CAL22393.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis CO92]
 gi|145212370|gb|ABP41777.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis Pestoides F]
 gi|149289442|gb|EDM39520.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis CA88-4125]
 gi|152958856|gb|ABS46317.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pseudotuberculosis IP 31758]
 gi|162352119|gb|ABX86067.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis Angola]
 gi|165912875|gb|EDR31501.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165921752|gb|EDR38949.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165989450|gb|EDR41751.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166205192|gb|EDR49672.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166961248|gb|EDR57269.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167048699|gb|EDR60107.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167054766|gb|EDR64570.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169752718|gb|ACA70236.1| inner-membrane translocator [Yersinia pseudotuberculosis YPIII]
 gi|229682516|gb|EEO78603.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Yersinia pestis Nepal516]
 gi|229686837|gb|EEO78916.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229695860|gb|EEO85907.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229706077|gb|EEO92086.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Yersinia pestis Pestoides A]
 gi|262363537|gb|ACY60258.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis D106004]
 gi|262367466|gb|ACY64023.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis D182038]
 gi|270337356|gb|EFA48133.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Yersinia pestis KIM D27]
 gi|294355931|gb|ADE66272.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia pestis Z176003]
 gi|320013596|gb|ADV97167.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 308

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 84/305 (27%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y I +Y   I+ +   +       +
Sbjct: 12  MFNGITLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFIVIAALMMVGIDASWL 71

Query: 99  SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
               +    +++                      I     I           +    R  
Sbjct: 72  LIGCAFLVSIVIASTYGWSIERVAYKPVRRSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + V                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLVTGQWTLGESNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L     L        +   + F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLVLGVAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|262377156|ref|ZP_06070381.1| urea ABC transporter, permease UrtC [Acinetobacter lwoffii SH145]
 gi|262307894|gb|EEY89032.1| urea ABC transporter, permease UrtC [Acinetobacter lwoffii SH145]
          Length = 357

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 48/341 (14%), Positives = 101/341 (29%), Gaps = 27/341 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +L  +  L L           Y  ++  +I+   + A  L +V G  G+LSL   + +
Sbjct: 21  FAILLALPWLHLLPADSTLHLSAYWVTLIGKIMCLALVALALDLVWGYAGILSLGHGLYF 80

Query: 75  AIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           A+G Y++ +                   W  +P   + +      + L  L         
Sbjct: 81  ALGGYAFGMYLMRQSAGEGIPDFMRFLSWTEVPWFWVGTEYFLWSLALVVLVPGIIAFIF 140

Query: 125 ATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                    +     +I            +  +  +                 +      
Sbjct: 141 GFFAFRSKIKGVYFSIITQAITFAAALLFFRNETGFGGNNGFTGFKTILGMDITSASMRA 200

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            + ++   +  L    +  L           IRD++     L    ++ KLSA+ +S+  
Sbjct: 201 SLCFITALVLLLCFIGLRHLMNKPYGRVLGAIRDSENRLQYLGYRTLWYKLSAWVLSAVI 260

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AGA +      I+P       +I +   V  GG  +L        ++ GV       
Sbjct: 261 AGIAGALYVPQAGIINPSEMNPVNSIEMAVWVAAGGRGTLIGPLIGAGVINGVKTY---- 316

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                     F  ++      ++     +V +     ++ L
Sbjct: 317 ----------FTSAYPEAWLLILGALFIVVTIFLPKGIIGL 347


>gi|50085078|ref|YP_046588.1| branched chain amino acid ABC transporter [Acinetobacter sp. ADP1]
 gi|49531054|emb|CAG68766.1| branched-chain amino acid transport protein (ABC superfamily,
           membrane) [Acinetobacter sp. ADP1]
          Length = 356

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 69/328 (21%), Positives = 135/328 (41%), Gaps = 16/328 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L   +  + FLF+    S    +++ +  L+  +   GL+I+ G  G LSL      A+
Sbjct: 28  ILFWFFVAIAFLFIPFVGSDYLFNAILVPYLVLALAGLGLNILTGFTGQLSLGSAAFMAV 87

Query: 77  GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GA++          L + L + +   I+   G+I+GLPSL+ +G YL ++TL        
Sbjct: 88  GAFATYNFELRIPQLPLLLSLFLGGTIAAVFGVIVGLPSLRIKGFYLIVSTLAAQFFIPW 147

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +  ++   TN  A   +                        +   +  Y + + +     
Sbjct: 148 LFTQYGWFTNYSASGVITAPKLV-------------ILGYSLDSPVGHYLLTISIVLGLT 194

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254
            I   L  +     ++ IRD + A  +L  +    KL AFA+SS ++G+AGA +A A   
Sbjct: 195 LIARNLLNSQYGRNFQAIRDMETAAVTLGISAAKTKLLAFAISSFYLGVAGALWAFAYLG 254

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            I  +      +  ++ I+I+GG++SL+      A ++ +  +   ++  +F        
Sbjct: 255 TIEANGLDLDRSFQILFIIIIGGLSSLAGSFFGAAFIVLLPIILSFLSNLFFGQGFDQAL 314

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   +  I +   ++     L+RL
Sbjct: 315 -LQNIQKIIFGILIIYFLIREPEGLVRL 341


>gi|148273746|ref|YP_001223307.1| branched-chain amino acid ABC transporterpermease protein
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
 gi|147831676|emb|CAN02645.1| branched-chain amino acid ABC transporter,permease protein
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
          Length = 486

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 95/291 (32%), Gaps = 29/291 (9%)

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSL- 115
           S++ G+ GL +         GA    +  +  GL+  L I ++ ++ GA G +       
Sbjct: 221 SLIYGTTGLNNFAHGELVTFGALMAYLFSNVLGLNPVLAIIITVVLGGAFGFVQDAALWK 280

Query: 116 KFRGDYLAIATL-IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
             R   L +  L I++      L        G   + + +            ++F     
Sbjct: 281 PLRKRRLGLVPLMIVTIGLSLALRYVFQFIFGADRLTLPNSPAPFLVVGPVSLKFTDVAG 340

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
           + V   + +    + +             T I  A R + DN+    +    +       
Sbjct: 341 AIVSIVLLLAVAYVLLY------------TKIGKATRAVSDNRSLAAASGIDVEGVIRVV 388

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           +   +A   ++G F A  +          S  ++V S V+LGG+ +       + ++   
Sbjct: 389 WIGGAALAALSGVFIAYYQSL--RWDTGASILLLVFSAVVLGGLGTAFGALIGSIVIGVF 446

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           + +   +                       ++ + +++L+R   +L  +  
Sbjct: 447 INVSTMVLP-------------ENMKYVAALVVMIVILLVRPQGILGRKDR 484


>gi|329937892|ref|ZP_08287374.1| bifunctional carbohydrate binding and transport protein
           [Streptomyces griseoaurantiacus M045]
 gi|329302849|gb|EGG46738.1| bifunctional carbohydrate binding and transport protein
           [Streptomyces griseoaurantiacus M045]
          Length = 651

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 112/326 (34%), Gaps = 41/326 (12%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +V  + +    G   +   + ++G+Q  +  + A+G++ V+ S G + L+     
Sbjct: 29  ALTALIVLVIAMSALSGDFLTTDNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVA 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A       + +G+ + L + ++     A G++ G      +      ATL M  + +
Sbjct: 88  ALSATVLAWSATSHGVPVVLAVVLAVATGVAAGLVNGFLIAYGKLPPFI-ATLAMLSVGR 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +         +G         +     +L  +   P   ++    +  ++LG     
Sbjct: 147 GLSLVV-------SGGSPIPFPDSVSHLGDTLGGWLPVPVLVMVVLGLVAALILG----- 194

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                   RT I  +   I  N++A       +   KL+ +A+S  F   AG   AA   
Sbjct: 195 --------RTYIGRSMYAIGGNEEAARLSGLRVKKQKLAIYALSGLFAAAAGIVLAARLS 246

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              P        +  I+ V++GG          S       IL  +      ++   F  
Sbjct: 247 SAQPQAAD-GYELDAIAAVVIGGASLAGGTGKASGTLIGALILAVLRNGLNLLSVSAF-- 303

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILM 334
                         ++ + + L +L+
Sbjct: 304 ----------WQQVVIGVVIALAVLL 319


>gi|306840729|ref|ZP_07473478.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO2]
 gi|306289302|gb|EFM60546.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO2]
          Length = 328

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 54/343 (15%), Positives = 123/343 (35%), Gaps = 28/343 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+  +  L +       L  +  ++    +G       + ++  +I+   +    L +V 
Sbjct: 1   MTELTQPLPQTRPSYAGLIGIVAIIAASVVGWFLFPDNL-ALLTRIIAIALLVLSLDLVT 59

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           G  G+ +L     +  GAY   I  + +      L+  +  +     G++ G   L+  G
Sbjct: 60  GYCGIATLGHAALFGAGAYGAGIAAAHFGVTDPILMTVIGLLAGAVTGLVSGAVILRATG 119

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
               + ++ +  +F     K    T G  G+         G               F +Y
Sbjct: 120 LAQLVLSIAVVHLFHEAANKASSWTGGSDGLSSISPDPIFGI------------FEFDLY 167

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              +Y   + +  +S   + ++ R+      R ++++     ++  ++  A+L  + +S 
Sbjct: 168 GRTVYIYAVILLLISFVFLRYVVRSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISG 227

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  G+ GA  A S   +  D   F+ +   + +++LGG  SL      T + +   ++  
Sbjct: 228 AVAGIGGALNAISTQVVGLDSLSFTMSAEALVMLVLGGAGSLFGGLVGTVVFMWFEDVVS 287

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             N +++               T++   L  V+L     L   
Sbjct: 288 TANPFHW--------------LTMVGALLIAVVLFAPRGLYGT 316


>gi|319794219|ref|YP_004155859.1| urea ABC transporter permease urtc [Variovorax paradoxus EPS]
 gi|315596682|gb|ADU37748.1| urea ABC transporter, permease protein UrtC [Variovorax paradoxus
           EPS]
          Length = 397

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 54/329 (16%), Positives = 105/329 (31%), Gaps = 36/329 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             +  ++  + L Y   A GL +V G  G+LSL   + + IG Y+  +            
Sbjct: 32  DIFRLNLVGKYLTYAFVAVGLVMVWGYGGVLSLGQGVFFGIGGYAMAMFLKLEASDPITT 91

Query: 96  IPVSAMISGACGMIMGL-----PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              S            +       L F+   L++A ++++ +    L+ +        G+
Sbjct: 92  KIQSTPGIPDFMDWNQITELPALWLPFKSLPLSLALVVLAPMALAWLVSFAMFKRRVGGV 151

Query: 151 YVA-----------------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           Y A                          +  L     + +     +  +YYV +G+   
Sbjct: 152 YFAIITQAVALICTVLIIGQQGYTGGVNGMTDLKTMLGWDTRTDGAKYILYYVCVGLLVA 211

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           S  +  +++ + +      +RD +         +   K+  F +++   G+ GA FA   
Sbjct: 212 SILLCRFIQTSKLGTLLLAMRDKEDRVRFSGYDVSNFKVFIFCLAAGLSGIGGAMFALQV 271

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             +SP       +I ++    +GG  SL        ++     L              F 
Sbjct: 272 GFMSPSFVGIVPSIEMVIFCAVGGRMSLVGAVYGALLVNAGKTL--------------FS 317

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            SF      LM      V +     L  L
Sbjct: 318 ESFPDLWLFLMAGLFIGVTMAFPMGLAGL 346


>gi|227113842|ref|ZP_03827498.1| branched-chain amino acid transporter permease subunit LivH
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
 gi|227329281|ref|ZP_03833305.1| branched-chain amino acid transporter permease subunit LivH
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 308

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 88/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +       +
Sbjct: 12  MFNGLTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDAGWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
              ++    +++                     +   I  I           +    R  
Sbjct: 72  LIGVAFIAAVVISSAYGWSIERVAYRPVRTSKRLIALISAIGMSIFLQNYVSLNQGSRDV 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + V                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLVTGQWVLGESNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L  +        F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGISTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     L        +   + F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLILGVAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|86751314|ref|YP_487810.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86574342|gb|ABD08899.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 355

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 106/322 (32%), Gaps = 14/322 (4%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSR 87
                     ++  +I I+        +++G  G +S    + Y IG+Y+  I       
Sbjct: 29  PFVFPGAKPLNVAAKICIFAALVASYDLLLGYTGTVSFAHTMFYGIGSYAMAIALYTMGP 88

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
              ++   I +   ++    + +GL SL+    + A+ TL ++  F  +  +   +T G+
Sbjct: 89  NWGAVATGIVIGLPLAALLALGIGLFSLRVEAIFFAMITLAVASAFLVLASQLSWLTGGE 148

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
            G   +             +         +   I  YY++L  C      +L +  +   
Sbjct: 149 DGRSFSLP----ELLRPGTVFIQDLFGVRINGRILTYYIILVGCAAMILGLLRVVNSPFG 204

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSEN 266
              + +R+N+    +L    +F    A  +++     AG   A       PD    FS  
Sbjct: 205 RVLQAVRENRFRAEALGYRTVFHLTYANVLAALVAACAGILNAMWLRYAGPDTSLSFSIM 264

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF------NMRH 320
           + ++ +V++GGM ++        I I        +      +                R 
Sbjct: 265 LDILLMVVIGGMGTIYGAIIGATIFILAQNYLQALMGAASTAAADAGLPLLPGLLHPDRW 324

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
              + +     +      ++  
Sbjct: 325 LLWLGLLFVASVYFFPTGVVGR 346


>gi|238759631|ref|ZP_04620792.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Yersinia aldovae ATCC 35236]
 gi|238702174|gb|EEP94730.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Yersinia aldovae ATCC 35236]
          Length = 308

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 86/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMVGIDASWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
               +    +++                     +   I  I           +    R  
Sbjct: 72  LIGCAFLVSIVIASAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + V                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLVTGQWTLAETNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     L        +   + F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLILGIAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|134295488|ref|YP_001119223.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|134138645|gb|ABO54388.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia vietnamiensis G4]
          Length = 417

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 54/291 (18%), Positives = 99/291 (34%), Gaps = 12/291 (4%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
                         Q  +     Q    V+ A   ++ +G+ GLLS        +GA++ 
Sbjct: 14  LFAACLALPAWLWPQGAVLGYLAQTAALVVLALSYNLQLGTTGLLSFGHAAVAGVGAFAA 73

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
               +R G  + LL  V  +   A G + GL + +  G   A+ TL + E          
Sbjct: 74  AHWFNRVGAPLPLLPLVGGVAGAAFGCVAGLLATRRAGTVFAMITLGIGECVAAAAWSVP 133

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               G  G+ +                   +           Y ++   C  SA  +  L
Sbjct: 134 AWFGGVGGVPI------------DRAGGAPWGGWQFGAPTHAYALIAAWCIGSALAMYAL 181

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            RT ++     +RDN     +L T     +L+    +S F G+AG       +  +PD  
Sbjct: 182 TRTPLARLANAVRDNPARVAALGTEPRHVRLAMVTCASFFAGVAGTLTLIDVEIATPDSV 241

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
             + +  V+   ++GG  +    A    +L  +  +  G++  +   L   
Sbjct: 242 SMARSATVLIAAVIGGTGTFFGPALGAVVLTALSVVVAGVSRAWALYLGVL 292


>gi|194292489|ref|YP_002008396.1| high-affinity branched-chain amino acid transport protein, livhm
           family [Cupriavidus taiwanensis LMG 19424]
 gi|193226393|emb|CAQ72342.1| high-affinity branched-chain amino acid transport protein, livHM
           family [Cupriavidus taiwanensis LMG 19424]
          Length = 285

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 88/305 (28%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A GL++V G L + +      Y  GAY    L +  G++ WL +  
Sbjct: 6   ILNGLTLGGVYSLVALGLTLVYGILHVPNFAHGAFYMAGAYVSYYLMTALGVNYWLAMLG 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+      M+          +   +  +I +      L        G     +      
Sbjct: 66  AALAVAVLSMLADRLVFHPLRNSPELHDMIAAIGILLFLEAGAQALWGADFHRMPTP--- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +   +    ++     L   + L+L RT        +  N++
Sbjct: 123 ---------YGQIVDVFGLTAPLQRLLIIGAAFALMVLLHLFLTRTMTGATIMAMAQNRE 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        L  FA+S A   +A   +A     +               I+ILGGM
Sbjct: 174 GAALVGIDATRVTLLVFAISGALAAIAATLYAP--INLVYPSMGNLVITKAFVIIILGGM 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+                               +  + L +++ +R   
Sbjct: 232 GSIPGAIVGGLIIGMAESFGGFYVS-------------TDYKDIIAFVLLVVILSIRPQG 278

Query: 339 LLRLR 343
           L   +
Sbjct: 279 LFAGK 283


>gi|254246680|ref|ZP_04940001.1| ABC branched-chain amino acid family transporter, inner membrane
           subunit [Burkholderia cenocepacia PC184]
 gi|124871456|gb|EAY63172.1| ABC branched-chain amino acid family transporter, inner membrane
           subunit [Burkholderia cenocepacia PC184]
          Length = 326

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 104/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  S
Sbjct: 35  IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 94

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +GL  W ++ ++ ++ GA G+ +    L++      +  L+++     ++        G
Sbjct: 95  YFGLPYWAMLVLAPVLVGAFGIAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 154

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 155 SSGQPYDVPSQLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 204

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 205 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 262

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +                     +     T++ +
Sbjct: 263 ITVFAVVVIGGMGSILGSIVTGLLLGVIEGFTRVF--------------YPEASATVVFV 308

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L R   L  
Sbjct: 309 IMAIVLLFRPAGLFG 323


>gi|86751759|ref|YP_488255.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86574787|gb|ABD09344.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 290

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 97/306 (31%), Gaps = 26/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + A GL++V G LG+++L     Y +GAY             W+ +  
Sbjct: 10  LLNAVQYGMVLFLVASGLTLVFGILGVINLAHGAFYMLGAYLAY----------WIALMT 59

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +    G +     L    + + I  L   +    +L+ +  I        +      
Sbjct: 60  GNFLVALVGGVAIAFVLGLALESVFIRWLYGRDHLAQVLLSFGLILVIDEARQLLFGKDV 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +      +  + Y ++   + +    ++A I   + RT I    R   +N++
Sbjct: 120 HSVAPPDWLSGSLQLTDNLSYPVYRLAICVFCLAVAALIFFVITRTKIGMIVRAGAENRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           FA   A   + G   A                I+   +V+LGG+
Sbjct: 180 MTRVLGIDYDKVNRLVFATGIALAALGGIVTAP--MSTVYPGMGDGMLILSFVVVVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++  A    ++                               L+ + + +V+L R + 
Sbjct: 238 GSVAGAAVGALLIGFTDTFGKVFFPSVSG--------------MLIYLLMAIVLLWRPNG 283

Query: 339 LLRLRT 344
           +L  R 
Sbjct: 284 ILGRRE 289


>gi|320199632|gb|EFW74222.1| Branched-chain amino acid transport system permease protein LivM
           [Escherichia coli EC4100B]
          Length = 345

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 9/206 (4%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +    +    +IY++   GL++VVG  GLL L     YAIGAY++ +L   YGL
Sbjct: 103 WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGL 162

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +P++ +++ A G ++G P L+ RGDYLAI TL   EI + +L+    IT G  GI
Sbjct: 163 GFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGI 222

Query: 151 YVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               +  F G             +   FF          IF+Y V L +  LS  +I  L
Sbjct: 223 SQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRL 282

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTI 227
            R  +  AW  +R+++ A  SL  + 
Sbjct: 283 LRMPLGRAWEALREDEIACRSLGLSP 308


>gi|238895344|ref|YP_002920079.1| ABC-type high-affinity branched-chain amino acid transport system
           permease component [Klebsiella pneumoniae NTUH-K2044]
 gi|238547661|dbj|BAH64012.1| ABC-type high-affinity branched-chain amino acid transport system
           permease component [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 304

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 84/304 (27%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y + AY   I  +          P+
Sbjct: 9   LINGLTLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMVSAYLCAIGLALLSFFGIHSFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +    +++                   + +   I      +               
Sbjct: 69  LIFATLVFTIVVTGVYGWAIERIAYRPLRNSTRLAPLISAIGMSLILQNYVQLSQGPNQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+ S           V       ++L+        +   ++ T +    R  + +++
Sbjct: 129 GIPTLLSGALRMTVGDGVVQITWTKVFILVAALVGMLILTWIIQYTRLGRICRATQQDRR 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A  G+AG     +          F   I   +  +LGG+
Sbjct: 189 MAAILGINTDRVISLVFVIGAAMAGLAGVLVTMNYGTFDFY-IGFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        +L        G+    +  +  F               L  +++ R   
Sbjct: 248 GSLPGAMLGGLLLGVAEAQFAGLVNSDYKDVFSF-------------ALLVAILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|256828424|ref|YP_003157152.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
 gi|256577600|gb|ACU88736.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
          Length = 297

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 96/307 (31%), Gaps = 22/307 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      +Y + A G ++V G L L++      + +GAY      + + +   + + V
Sbjct: 10  FLNSLTLGSLYALIAIGYTMVYGILRLINFAHSEIFMLGAYFVFWGITLFHMPWAVAMIV 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +     G+++   + +   D   I+ LI +      L     +               
Sbjct: 70  SVISVAGIGILVDRIAYRPLRDAPRISALISAIGVSFFLQNVAIVFFQA----------I 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                R            V       +V +   FL   ++  +  T      R I  + +
Sbjct: 120 PRQVYRPEWLEKPLLWGDVRVLPLTLFVPVLSFFLMLVLVYIVYHTKAGLGMRAISKDIE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
             + +   +       F + SA    +G  +A    ++ P M             ++GG+
Sbjct: 180 TSYLMGVPVNKVIALTFGIGSALAAASGIMWALRYPQLQPIM-GAIPGFKAFIAAVVGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L  +  +            + F             I L  ++L++   
Sbjct: 239 GSIQGAVIGGLLLGFIEIMT-----------VAFFPDLAGYRDAFAFILLIGMLLIKPTG 287

Query: 339 LLRLRTP 345
           ++ ++T 
Sbjct: 288 IMGVKTE 294


>gi|296159889|ref|ZP_06842710.1| urea ABC transporter, permease protein UrtB [Burkholderia sp.
           Ch1-1]
 gi|295889872|gb|EFG69669.1| urea ABC transporter, permease protein UrtB [Burkholderia sp.
           Ch1-1]
          Length = 305

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 90/305 (29%), Gaps = 17/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++   GL+++ G +G++++       IGAY+  +             PV   +
Sbjct: 18  LSLFSVLLLMGLGLAVIFGQMGVINMAHGEFMTIGAYTIYMFSQLADNYWHGFAPVYFPL 77

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +      +   +       L     +       +L  W      +           +  T
Sbjct: 78  AICAAFALAFAAGWVAEWAL--IRHLYRRPLDTLLATWGLSLGMQQVFRSVFGPKEVSPT 135

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P   +   I   +V+     ++  ++L L R+      R    N++   +
Sbjct: 136 LPDWLMGSWSPKPGLDIPINGLFVMSLAVVMTGGVLLALYRSRWGLRVRATVANRQMANA 195

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     G+AGA F A     +         +    +V  GG  SL 
Sbjct: 196 AGIDTRKTDRLTFAIGCGMAGVAGAAFTAIGS--TGPTSGSLYIVDSFLVVTFGGAASLL 253

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +  +  +                         + ++ + +V+++R   L   
Sbjct: 254 GTVASAFGIAQMQSISEFFM-------------TGSSARVVTLLTIVIVLMLRPQGLFAS 300

Query: 343 RTPSN 347
           +    
Sbjct: 301 KVRRA 305


>gi|260459988|ref|ZP_05808241.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259034199|gb|EEW35457.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 328

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 57/328 (17%), Positives = 112/328 (34%), Gaps = 28/328 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +    ++   L    +  Y  ++    LI+ +FA  L    G  G+L       + IG
Sbjct: 9   LLIFAVCVVLAVLYPLFADGYQLTVIRDALIFGLFAASLDFFWGRTGILCFGHAAFFGIG 68

Query: 78  AYSYVILGSR----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            Y   ++       +G  + ++  V+     A  +   L     RG Y  I TL M  I 
Sbjct: 69  GYIMALITLDDAIAFGSLLGIIGAVAGAAFVAAIIGYFLFFGGIRGSYFTIVTLAMGVIC 128

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           Q   + W  +T G +G+     + F  + +             +  ++  Y  +  +  +
Sbjct: 129 QQAAVSWSSVTGGDSGLIGIPPIEFDVSGMH----------LDLSQDLPSYVFVSAIVAV 178

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
               +  + R         I+DN+    +L        L  F +S+A  G+AGA +    
Sbjct: 179 VVLALWSISRGRWGTILTAIQDNEVRAAALGHNAPLRLLVTFVLSAAIAGLAGALYVCMA 238

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             ++PD+     +  VI  V +GG  +L         +    +     N   +       
Sbjct: 239 GLVAPDLSGLLLSTEVIVWVAVGGRGTLLGPVLGAIFIQRAQQTISSFNPSLWP------ 292

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    L+     +++ +    +L 
Sbjct: 293 --------LLLGCVFVVIVFLLPDGILS 312


>gi|86360553|ref|YP_472441.1| branched chain amino acid ABC transporter permease [Rhizobium etli
           CFN 42]
 gi|86284655|gb|ABC93714.1| probable branched-chain amino acid ABC transporter, permease
           protein [Rhizobium etli CFN 42]
          Length = 329

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 60/310 (19%), Positives = 123/310 (39%), Gaps = 29/310 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS      +   AY        +GL   L I +   
Sbjct: 42  FLMKLLCFALFACAFNLLLGYTGLLSFGHATFFGGAAYFTAYTVKSWGLPPELGILIGVA 101

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G++MG  +++ +G Y A+ TL +S++F    ++ +                    
Sbjct: 102 GAAFLGLVMGFFAIRRQGIYFAMITLALSQMFFFFCLQAEFTEG--------------ED 147

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++S+ R   F    +     MYY +L +  +  SII     +      ++IR+N++   
Sbjct: 148 GIQSVPRGHLFGFIDLNDSTNMYYFVLAVFLVGISIIWRFINSPFGMILKSIRENEQRAI 207

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL  ++   KL AF +S+A  G+AGA  +      +     +  +  VI + +LGG+ +L
Sbjct: 208 SLGYSVARYKLGAFVMSAALAGLAGAVKSIVFQFATLTDVAWQMSGEVILMTLLGGIGTL 267

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +++ +        F                 T +  I   + +L+    ++ 
Sbjct: 268 IGPLFGAGLVVALENYLATSEFPV---------------TIITGIVFMVCVLIFRRGIIG 312

Query: 342 LRTPSNFLER 351
               S    +
Sbjct: 313 EFYASRLGRK 322


>gi|107024511|ref|YP_622838.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054]
 gi|116688110|ref|YP_833733.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
 gi|105894700|gb|ABF77865.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116646199|gb|ABK06840.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 320

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 104/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  S
Sbjct: 29  IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 88

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +GL  W ++ ++ ++ GA G+ +    L++      +  L+++     ++        G
Sbjct: 89  YFGLPYWAMLVLAPVLVGAFGIAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 148

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 149 SSGQPYDVPSQLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 198

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 199 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 256

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +                     +     T++ +
Sbjct: 257 ITVFAVVVIGGMGSILGSIVTGLLLGVIEGFTRVF--------------YPEASATVVFV 302

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L R   L  
Sbjct: 303 IMAIVLLFRPAGLFG 317


>gi|222824111|ref|YP_002575685.1| branched-chain amino acid ABC transporter permease [Campylobacter
           lari RM2100]
 gi|222539333|gb|ACM64434.1| branched-chain amino acid ABC transporter, permease protein
           [Campylobacter lari RM2100]
          Length = 298

 Score = 77.2 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 99/303 (32%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++        +GAYS +   +   +     + +
Sbjct: 10  VINGFSLGSMYALIAIGYTMVYGVLRLINFAHGDIMMVGAYSALFCVTSMNVPFLGALSL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + + A G+ +   + K       I+ LI +     ++     +  G    Y     Y 
Sbjct: 70  AMLFAAALGIAIDRVAYKPLRKAPRISLLITAIGISFLIQNVFNVLFGSTPKYFPVPSYL 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 + I          I   F+  V+L + +          ++    A R +  +  
Sbjct: 130 ETVINFNNISISINNILVPILTFFILLVVLFILY----------KSKYGIAIRALAFDIH 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           FA+ SA   + G F+A S   + P M      +      +LGG+
Sbjct: 180 TVNLMGIDANRIIAIVFALGSALAAIGGIFWAVSYPSVEPSMGTLI-GLKAFGAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++       I+     +   +          F             I L L++L +   
Sbjct: 239 GSVAGAVLGGLIIGFTEVVVVAIFPDLSGFKDAFA-----------FIFLVLILLFKPTG 287

Query: 339 LLR 341
           +L 
Sbjct: 288 ILG 290


>gi|317124777|ref|YP_004098889.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Intrasporangium calvum DSM 43043]
 gi|315588865|gb|ADU48162.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Intrasporangium calvum DSM 43043]
          Length = 307

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 96/306 (31%), Gaps = 12/306 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLSIWLLIP 97
           + +      +Y + A G ++V G + L++      + IGA+ +       +  +  L + 
Sbjct: 8   LVNGLTLGSLYALIAVGYTVVYGIVQLINFAHGEVFMIGAFGALATWTVLFQGTTALWVL 67

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
              ++      +     ++            ++ +   I I           ++      
Sbjct: 68  PVMILGAVVASVTTAVIMERIAYRPLRGAPRLAPLITAIGISVALQE--AVRLFYPGAKS 125

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +      ++         V  +    + +  +   +A +  ++  T   +  + + +++
Sbjct: 126 KIPFPRIDVVTGPALSFGGVTVQRAAVFTVGALLMSAALLWWFVNHTRTGHGMQAVSEDK 185

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                +   +    + AFA+ +    +AG         +   M  F   +   +  +LGG
Sbjct: 186 DTARLMGVNVDRIIVIAFALGAFLAAIAGVAQGLLNANVDFRM-GFLAGLKAFTAAVLGG 244

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + ++        +L     L  G     F          +        + L +V++ R  
Sbjct: 245 IGNIQGAVVGGLVLGVAEALAVGFIPGQFGG--------SAWKDVWAFVLLIVVLVFRPQ 296

Query: 338 SLLRLR 343
            +L  R
Sbjct: 297 GILGAR 302


>gi|189351960|ref|YP_001947588.1| branched-chain amino acid transporter permease [Burkholderia
           multivorans ATCC 17616]
 gi|189335982|dbj|BAG45052.1| branched-chain amino acid transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 325

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 57/324 (17%), Positives = 133/324 (41%), Gaps = 16/324 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+Y +LL   L A     Y   +  ++L + +FA   ++++G  GLLS    +  A   Y
Sbjct: 6   VLYGVLLAALLVAPFVGAYPVFVM-KVLAFALFAAAFNLLIGYTGLLSFGHAMFLATAGY 64

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +        G +  L +     I+   G+++GL +++ +G Y A+ TL  +++   I ++
Sbjct: 65  ATGYSMQTLGFTPELGVLAGTAIATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYFIYLQ 124

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                                  ++ + R   F    +  ++ +YYV+L +   + + I+
Sbjct: 125 A--------------PFTHGEDGLQGVPRGRLFGLLDLSNDLALYYVVLVVIVAACAFIV 170

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +        I++N+    SL       KL AF +S+   G+AG+         +  
Sbjct: 171 RIVHSPFGQVLVAIKENEARAISLGYDTDRFKLLAFVLSAGLAGLAGSLKVLVLGFETLS 230

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318
              ++ + +V+ + ++GGM +L       A+++ + +    +  +  + + + +  S   
Sbjct: 231 DAYWTMSGLVVLMTLVGGMGTLFGPLLGAALIVALEDRLGDIGEWLASTTGIGWFHSLGE 290

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
             T +  +     +L     ++  
Sbjct: 291 SATIVTGLIFIACVLAFRRGIVGE 314


>gi|113867261|ref|YP_725750.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113526037|emb|CAJ92382.1| ABC-type transporter, permease component: HAAT family [Ralstonia
           eutropha H16]
          Length = 315

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 65/323 (20%), Positives = 118/323 (36%), Gaps = 29/323 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A +   +L          ++   +     I  +   G+ +++G  G+++L     Y IGA
Sbjct: 6   AFILAGVLLWVAAGQLLSRHHVDLLNFAAILAVGGLGVGLLLGQCGIVNLAQASFYGIGA 65

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+     +  G            IS A    +G+P L+  G +LA+ATL +  I   +  
Sbjct: 66  YASAYCTTALGWPALAGAAAGLAISAALAAAIGVPVLRLGGFFLALATLAVGSIANVLFF 125

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +W  +T G  GI    +L + G  + +  R               YY +  +  +   ++
Sbjct: 126 EWDWLTGGTLGIGGIPKLSWFGYVLDTPER--------------YYYFVWPLLAVLLWLV 171

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L +     A R +RD   A   L   +   K S F +S+    +AG  FA     +S 
Sbjct: 172 DNLVKGRPGLAMRAMRDAAPAAQVLGVDMHRLKTSMFVLSAMLGSLAGTLFAHYVSFVSV 231

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F    +I+ + + ++ G  S   +      +  V EL  G+  +              
Sbjct: 232 QSFTVERSIVFLLVPVVAGARSTYGVILGALFVSLVPELLSGLGDF-------------- 277

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
            H  L    L LV+ +    +  
Sbjct: 278 -HQVLFGAVLVLVVTLMPGGMTG 299


>gi|317404589|gb|EFV84994.1| inner-membrane translocator [Achromobacter xylosoxidans C54]
          Length = 348

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/323 (11%), Positives = 88/323 (27%), Gaps = 27/323 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS----- 86
                 +  ++  + + +   A G+ +  G  G+LSL   I + +G Y   +        
Sbjct: 25  PLALDPFRLNLVGKYMAFAFVAIGIVLTWGYSGVLSLGQGIFFGLGGYMMAMFLKLEASA 84

Query: 87  ----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE----IFQNILI 138
                + +   +       +         L  +   G    + +L +           ++
Sbjct: 85  PDLPDFMVWSSVDSLPVWWLPFHSLGWTLLLIVALPGLAAYLFSLAIFRKRVSGVYFAIV 144

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                      I            +        +       ++ +Y +      L+    
Sbjct: 145 TLALAMTLTVLIIGQQGDTGGANGITDFRTLLGWDIVGDDGKLALYLIEAAALTLAMLAA 204

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           L + R+ +      IRD +             K   F V++    + GAFF      ISP
Sbjct: 205 LAIVRSRLGKILIAIRDREDRVRFSGYDTAHVKACVFCVAAVLSSIGGAFFTLQVGLISP 264

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                  +I ++    +GG  S+        ++  +                    +F  
Sbjct: 265 GAIGVVASIEMVIYAAVGGRLSIPGAVVGALLIGFLKSYLSE--------------TFPE 310

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
                +     +V++   + L  
Sbjct: 311 IWLYFLGAIFIVVVVAMPNGLAG 333


>gi|186893584|ref|YP_001870696.1| branched-chain amino acid transporter permease subunit LivH
           [Yersinia pseudotuberculosis PB1/+]
 gi|186696610|gb|ACC87239.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
          Length = 308

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 101/308 (32%), Gaps = 21/308 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI----WL 94
           + +       Y + A G ++V G +G+++      Y I +Y   I+ +   +      WL
Sbjct: 12  MFNGITLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFIVIAALMMVGIDTSWL 71

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
           LI  + ++S       G    +     +  +  +++ I    +  +              
Sbjct: 72  LIGCAFLVSIVIASTYGWSIERVAYKPVRRSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
            L  L T   +L     F ++    ++ ++ V         ++ L++R + +  A R   
Sbjct: 132 ALPSLVTGQWTLGESNGFAATISTMQLTIWIVTFLA---MLALTLFIRYSRMGRACRACA 188

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           ++ K    L           F + +    +AG         I+P    F   +   +  +
Sbjct: 189 EDLKMASLLGINTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAV 247

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           LGG+ S+        +L     L        +   + F               L +V+L+
Sbjct: 248 LGGIGSIPGAMIGGLVLGVAEALTSAYLSTEYKDAVSF-------------ALLIVVLLV 294

Query: 335 RSHSLLRL 342
               +L  
Sbjct: 295 MPTGILGR 302


>gi|284050089|ref|ZP_06380299.1| inner-membrane translocator [Arthrospira platensis str. Paraca]
          Length = 387

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/324 (12%), Positives = 86/324 (26%), Gaps = 28/324 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 +   +  + L   + A G+ ++ G  GLLSL   I +++G Y+  +        
Sbjct: 37  PLALPVFRLKLLGRFLSLCIVALGIDLIWGYTGLLSLGHGIFFSLGGYALAMYLQLQLPE 96

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             +                                  +       L+    I      I 
Sbjct: 97  GQIPDFFMLYGVENLPWFWEPFYSFPFTLVAIFLIPGIVAAILGYLVFRNRIKGVYFSIL 156

Query: 152 VADRLYFLGTTVRSL--------------IRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
               L                           F   +     ++  Y + + +  L   +
Sbjct: 157 TQAALLVFFHLFNGQQKYINGTNGLKTDTTMIFGTQAGSPAAQLVFYELSILLMILIYLL 216

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             WL           IRD++             K+  FA+S A  G++GA +      I+
Sbjct: 217 CRWLTSGRFGRLLVAIRDDENRVRFSGYDPTGFKVLVFAISGAIAGISGALYTVQSGIIT 276

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P   + + +I ++  V +GG  +L      T ++                        F 
Sbjct: 277 PSFMEVAFSIEMVIWVAVGGRATLVGAILGTVLVRLGQTFLSE--------------QFP 322

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                       +V+ +    ++ 
Sbjct: 323 QVWLFFQGALFLIVVTVLPSGIVG 346


>gi|116694035|ref|YP_728246.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113528534|emb|CAJ94881.1| ABC-type transporter, permease component: HAAT family [Ralstonia
           eutropha H16]
          Length = 378

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 51/342 (14%), Positives = 103/342 (30%), Gaps = 36/342 (10%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 +  ++  + L Y   A GL ++ G  G+LSL   + + +G Y+  +        
Sbjct: 35  PLALDVFRLNLVGKYLSYAFVAVGLVMLWGYGGVLSLGQGVFFGLGGYAMAMFLKLEASD 94

Query: 92  IWLLIPVSAMISGACGMIMG-----LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
                  S                      FR    A+A ++   +    ++ +      
Sbjct: 95  PRSTAIQSTPGIPDFMDWNQLSALPWWWEPFRHLPFAMAGVVAIPVLLAFVVSFAMFRRR 154

Query: 147 KAGIYVA-----------------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            +G+Y A                          +  L     +        + +Y+V + 
Sbjct: 155 VSGVYFAIITQAVALILSVLIIGQQGYTGGVNGITDLKTMLGWDIRTDSARLNLYFVNVA 214

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           + F + ++  W++R+ +      +RD +         +   K+  F +++A   + GA F
Sbjct: 215 LLFGAVALCRWIQRSKLGVLLLAMRDKEDRVRFSGYDVAMFKVFVFCLAAALSAIGGAMF 274

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                 +SP       +I ++    +GG  SL      T ++                  
Sbjct: 275 TLQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLVGAVWGTLLVNAGKTY------------ 322

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             F  SF      LM      V++     L  L        R
Sbjct: 323 --FSESFPDLWLFLMAALFIGVVVAFPDGLAGLYRKYLARRR 362


>gi|121610150|ref|YP_997957.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121554790|gb|ABM58939.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 372

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/347 (12%), Positives = 91/347 (26%), Gaps = 32/347 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +          L            Y  ++  +I+ Y + A  + ++ G  G+LSL   + 
Sbjct: 28  LAVCALAPVLNLWLPAGSLLHLSDYTVALLGKIMCYAICALAMDLIWGYTGILSLGHGLF 87

Query: 74  YAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           +A+G Y   +                        W  +P    +S +    + L      
Sbjct: 88  FALGGYVMGMYLMRQIGRDGNYQSALPDFMVFLDWKALPWHWALSDSFAATLVLIVAVPG 147

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
                          + +           A + +  R             F R     + 
Sbjct: 148 LVAWVFGYFAFRSRIKGVYFSIITQAMTYAAMLLFFRNETGFGGNNGFTDFKRILGQPIA 207

Query: 179 YEIFMYYVLLGM---CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
            +     + +           +   L R+      + +RD +          +  KL+ +
Sbjct: 208 TQNMRMLLFVLTGLTLLGFFVLARALVRSKFGLVLQAVRDAESRVMFSGYAPLPYKLTIW 267

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            +S+    +AGA +      I+P     + +I +     +GG  +L        I+ G  
Sbjct: 268 TISAMMCAVAGALYVPQVGIINPGEMSPANSIEIAIWAAVGGRATLIGPIIGAFIVNGAK 327

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                              +        +      V L     ++ L
Sbjct: 328 SWLT--------------VAAPEFWLYFLGALFIAVTLFLPGGVMGL 360


>gi|190895540|ref|YP_001985832.1| branched-chain amino acid ABC transporter, permease protein
           [Rhizobium etli CIAT 652]
 gi|190699485|gb|ACE93569.1| probable branched-chain amino acid ABC transporter, permease
           protein [Rhizobium etli CIAT 652]
          Length = 329

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 59/310 (19%), Positives = 122/310 (39%), Gaps = 29/310 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS      +   AY        +GL   L I +   
Sbjct: 42  FLMKLLCFALFACAFNLLLGYTGLLSFGHATFFGGAAYFTAYTVKSWGLPPELGILIGVA 101

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G++MG  +++ +G Y A+ TL +S++F    ++ +                    
Sbjct: 102 GAAFLGLVMGFFAIRRQGIYFAMITLALSQMFFFFCLQAEFTEG--------------ED 147

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++S+ R   F    +     MYY +L +  +   II     +      ++IR+N++   
Sbjct: 148 GIQSVPRGHLFGFIDLNSSTNMYYFVLAVFLVGILIIWRFINSPFGMILKSIRENEQRAI 207

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL  ++   KL AF +S+A  G+AGA  +      +     +  +  VI + +LGG+ +L
Sbjct: 208 SLGYSVARYKLGAFVMSAALAGLAGAVKSIVFQFATLTDVAWQMSGEVILMTLLGGIGTL 267

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +++ +        F                 T +  I   + +L+    ++ 
Sbjct: 268 IGPLFGAGLVVALENYLATSEFPV---------------TIITGIVFMVCVLIFRRGIIG 312

Query: 342 LRTPSNFLER 351
               S    +
Sbjct: 313 EFYASRLGRK 322


>gi|300864177|ref|ZP_07109065.1| permease protein of branched-chain amino acid ABC transporter
           [Oscillatoria sp. PCC 6506]
 gi|300337821|emb|CBN54211.1| permease protein of branched-chain amino acid ABC transporter
           [Oscillatoria sp. PCC 6506]
          Length = 316

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 95/319 (29%), Gaps = 31/319 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91
             +      +Y +FA G ++V   LG+++      + +GAY    L              
Sbjct: 10  FLNGLSIGSVYAIFALGYTLVFSILGIINFAHGAVFTLGAYFTYTLMGGTFGFNGLLANA 69

Query: 92  -------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                   +  + + + ++G  G+ +   + +      +   L +       +     I 
Sbjct: 70  KGPVQLPFFGALIIGSTLAGLVGVTIERIAFRPLRQRQSDPLLTVVSSLGVAVAIANIIQ 129

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                          G         F      +        +      + A +   +  T
Sbjct: 130 YLVGAEIYTFPANTYGN--LPAAINFGTLDKPIPIRTVQVVIFGVSIVIVAILTYLINFT 187

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
               A + + ++      L        +  F VSS   G+AG    +S   I+   F   
Sbjct: 188 KFGKAMQAVAEDDITASLLGIDTDRYIVLTFFVSSFLAGLAGTLVGSSV-SIAGPYFGIV 246

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
             +  +++++LGG+ S+        ++  V                     F+       
Sbjct: 247 FGLKGLAVIVLGGLGSIPGAVLGGFVIGLVEAFV--------------PADFSAYKDAAA 292

Query: 325 VIALFLVILMRSHSLLRLR 343
              LF+++L+R   LL  R
Sbjct: 293 FAILFVMLLVRPQGLLGRR 311


>gi|257784339|ref|YP_003179556.1| inner-membrane translocator [Atopobium parvulum DSM 20469]
 gi|257472846|gb|ACV50965.1| inner-membrane translocator [Atopobium parvulum DSM 20469]
          Length = 290

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 94/289 (32%), Gaps = 12/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + LL+         G+Y   I   + GL+  + + +
Sbjct: 6   VLNGLQLGSIYALVALGYTMVYGIILLLNFAHGDIIMFGSYVAWIALVQLGLNPAIAVLL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G+++   +     +   ++ LI +     +L     +  G            
Sbjct: 66  AIFGCVVLGVLIDKVAYAPLREAPRLSILITAIGVSYLLENGVQLLLGADAKV------- 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + ++I                   +      + ++ + +++T +  A R + ++  
Sbjct: 119 ----IPNIIDLGTVQVFGSTLSGTALLTVAVTTLATVALTVLVQKTRLGKAMRAVSEDMG 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FAV SA  G+A   ++ +  ++SP M             +LGG+
Sbjct: 175 AARLMGVNVNSTISFTFAVGSALAGIAAILYSMAYQQVSPTM-GVMLGTKAFVAAVLGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            S+        I+              +   + F     +       + 
Sbjct: 234 GSIPGAVIGGLIVGFSEVFVAAFGLSVWQDAVVFLLLILVLVVKPTGLL 282


>gi|307132622|ref|YP_003884638.1| branched-chain amino-acid ABC transporter permease [Dickeya
           dadantii 3937]
 gi|306530151|gb|ADN00082.1| branched-chain amino-acid ABC transporter permease [Dickeya
           dadantii 3937]
          Length = 299

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 102/303 (33%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++        +GA+  ++  +  GL     + +
Sbjct: 10  VVNGMSLGSMYALIAIGYTMVYGVLRLINFAHADIMMVGAFMALLGFTSLGLPFGAAVIL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I+   G+ +   + +       I+ LI +      L     +  G +  Y     +F
Sbjct: 70  AILIAALLGIGIDQIAYRPLRQASKISMLITAIGVSFFLENLFNVVFGGSPRYFESPPFF 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             ++     + V L    L A I+  L RT    A R +  +  
Sbjct: 130 NQI----------INLGPIVVTNVAWIVPLMTLALLAVILCILYRTRQGMAIRAVAFDVN 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           FA+ SA   + G F+A S   I P M      +   +  +LGG+
Sbjct: 180 TVRLMGIDANQIIAFVFALGSALAALGGVFYAISYPSIDPLM-GVLIGLKAFAAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++       IL     +   +          F   F           L LV+L R   
Sbjct: 239 GSVTGAVIGGFILGFTEVVAVALFPELGGYKDAFAFMF-----------LILVLLFRPVG 287

Query: 339 LLR 341
           ++ 
Sbjct: 288 IMG 290


>gi|303247752|ref|ZP_07334021.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
 gi|302490836|gb|EFL50735.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
          Length = 294

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 100/311 (32%), Gaps = 31/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A GL+++ G + +++        +G +S   L    G+  +L + +
Sbjct: 8   IINGLMMGAMYGLTALGLTLIFGVMKVINFAHGSLLMVGMFSAYWLIKLTGIHPYLALII 67

Query: 99  SAMISGACGMIMGLPSLKF-----RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
              I    G  +    +K      R        +I++     +L     +  G       
Sbjct: 68  VPPILYFFGYYLQDVVIKPVFKSEREVREPATVIIVTTGVWYVLDNLALMCFGAE----- 122

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                   TVR+ I          I  I  +   +     +  + L++R+T I  A R  
Sbjct: 123 ------YRTVRTAISNKSMALGPYIVSIPKFSGFVVAILTAVGLALFMRKTKIGMALRAT 176

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             +++A   +          AF + +A  G+AG                   +I    IV
Sbjct: 177 ALDREAANLMGIDQYKVYNIAFGLGTAIAGIAGCVLIPFYYV--YPSVGVVFDIRAFIIV 234

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ S+        ++  V  +        +                ++     +++ 
Sbjct: 235 VLGGLGSIPGALLGGLVIGLVESVFSQFMASTWTEA-------------IIYAIFLIILF 281

Query: 334 MRSHSLLRLRT 344
           ++       + 
Sbjct: 282 VKPSGFFGNKQ 292


>gi|312880168|ref|ZP_07739968.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Aminomonas paucivorans DSM 12260]
 gi|310783459|gb|EFQ23857.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Aminomonas paucivorans DSM 12260]
          Length = 287

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 56/305 (18%), Positives = 99/305 (32%), Gaps = 25/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY +   GL++V G L +L +     Y  GAY   +       S+ L +  
Sbjct: 8   ILNGIAIGSIYALTTLGLALVYGILKILHVAHASVYTAGAYV-GLYLFGVTESLTLAVLG 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S       G+ +          +     LI S      L +   +  G            
Sbjct: 67  SMAFCALLGVAIERFVYFPLLKFPPYVPLISSIAIFLGLEEVCRLVAGPE---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T    + F  F    ++    +  V +    +   +     +T    A R    + +
Sbjct: 117 -ILTFPVKLPFPSFHVGHLLISSTLTAVYVITAAVLGILWFLSTKTEFGLAMRATSQDME 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL     +   + F + SA   +AG       +++ P M         ++++++GGM
Sbjct: 176 TASSLGVNSHWVVSATFMIGSATAAIAGILVGIYYNQVYPTM-GAVPAYKTLALIVVGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A+ +L     L  G                 M    L  IA+ +V+L R   
Sbjct: 235 GSVPGAVLASLLLGVGETLLIGYA------------DIPMPRDALAFIAMIVVLLWRPQG 282

Query: 339 LLRLR 343
           LL  R
Sbjct: 283 LLGKR 287


>gi|332528991|ref|ZP_08404957.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
 gi|332041541|gb|EGI77901.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
          Length = 321

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 51/325 (15%), Positives = 121/325 (37%), Gaps = 26/325 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L   +        ++  QILI+ +FA  L + +G  G+L++     +  GAY+  +L  
Sbjct: 20  LLLGSSFFLAPDHLTLLSQILIFGLFAVSLDMALGYAGILTVGHAAFFGAGAYAAGLLAR 79

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
                 +  +  +  ++G  G ++    ++       + T+ +  +   ++ +   IT G
Sbjct: 80  HGWGEPFTGLLTALAVAGTLGYVLSYMVVRGADLTRLMITIGVCVLLYELVNRLSGITGG 139

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             G+                +        F ++    +     M  L   ++  + R+  
Sbjct: 140 TDGLQGM------------TVWPVAGLFEFDLFGKTAFVYAYAMVLLMFLLVRRVLRSPF 187

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A R I DN++   ++ + +      A+A S+A  G+AGA  A +   +  +   F+ +
Sbjct: 188 GLALRGIHDNRRRMLAIGSPVESRLRMAYAFSAAIAGVAGALLAQTTQFVGIESISFNRS 247

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             ++ I++LGG   L        + + V +    +N                     + +
Sbjct: 248 AEILIILVLGGTGRLYGGLIGAIVYMLVHDGFADLN--------------PEYWMFWLGL 293

Query: 327 ALFLVILMRSHSLLRLRTPSNFLER 351
            L  V+++    ++ L +    ++ 
Sbjct: 294 FLITVVMVGRGGIMGLLSRLVRIKE 318


>gi|298528275|ref|ZP_07015679.1| inner-membrane translocator [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511927|gb|EFI35829.1| inner-membrane translocator [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 301

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 98/305 (32%), Gaps = 16/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      + IGAY  + + +   ++ +L   +
Sbjct: 8   LINGLAVGGIYALIALGYTMVYGVMRLINFAHGDLFTIGAYLGLTVLTSVAVTAYLGPFL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++     M M                     +  + ++     +   + + +      
Sbjct: 68  GVILLMMIIMCMVGVVGVVLERVAYRPVRQADRL--SAVVSALGASIFLSNLVMLIWGPR 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  ++         +   +    VLL    L   +  ++++T    A R +  +  
Sbjct: 126 FRVYPDDILPRITLNILGLDVPLMRILVLLASLILMGILYYFVQKTKTGTAIRAVAIDHG 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       F +  A  G AG        +I+  M  ++  +      +LGG+
Sbjct: 186 ASRLMGINVNRIISLVFLIGPALGGAAGVMVGLYYGQINFTM-GWAFGLKAFIAAVLGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L  +  L        +   + F             I L L+++ R   
Sbjct: 245 GNIPGAMIGGLLLGVIEALGAAFISTAWKDGIAF-------------IVLILILIFRPTG 291

Query: 339 LLRLR 343
           +L  R
Sbjct: 292 ILGER 296


>gi|218531620|ref|YP_002422436.1| urea ABC transporter permease UrtB [Methylobacterium
           chloromethanicum CM4]
 gi|218523923|gb|ACK84508.1| urea ABC transporter, permease protein UrtB [Methylobacterium
           chloromethanicum CM4]
          Length = 308

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 95/301 (31%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   +YV+ A GL+I+ G +G++++       +GAY   +  + +   +  L      +
Sbjct: 22  LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTYLCSTFFQTYLPSLFGAYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           + A   +            L     +       +L  W      +           +G  
Sbjct: 82  AMALAFLASRAMGMLVEWAL--IRHLYKRPLDTLLATWGLSLILQQAYRTIFGPREVGVE 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           + S +      +  +  +I   +V+     ++  + + + R+      R +  N+    +
Sbjct: 140 LPSWMMGSIPVTDSIEVQINGLFVIAVTAVITVGVAVLMYRSRFGAQIRAVMSNRPMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +         + F +     G+AG+ F       +         +    IV+ GG  SL 
Sbjct: 200 VGIDTEKVDRTTFGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLIVVFGGAASLL 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++A+  ++++R   L  L
Sbjct: 258 GTIASAFSISQTQSTLEFFLSGSMAK-------------VLTLLAVVGILMLRPQGLFTL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|323700717|ref|ZP_08112629.1| inner-membrane translocator [Desulfovibrio sp. ND132]
 gi|323460649|gb|EGB16514.1| inner-membrane translocator [Desulfovibrio desulfuricans ND132]
          Length = 300

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 93/288 (32%), Gaps = 4/288 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
                 +  IY + A G ++V G + L++      Y IGA++ +I+     +  +     
Sbjct: 8   FMGGLTRGSIYALIALGYTMVYGIIELINFAHGEIYMIGAFTGLIVAGLLTMLGFPG--P 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++      ++   +  F  + +A   L  +      LI    ++       +  +   
Sbjct: 66  AILVIAIVCAVIWAAAYGFTIEKMAYKPLRNAPRLSP-LISAIGMSIFLQNYVMLAQTSD 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +  F        +       ++L        + L+++ T +  A R    N+K
Sbjct: 125 FLPFPELIPHFGFMKKLGTVMSSAELVIILATVASCVGLTLFIKFTKLGKAMRATAQNRK 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +     + F + S+   + G   A+   +I+     F   I   +  +LGG+
Sbjct: 185 MAMLVGINVDMVISATFIIGSSLAAVGGVLIASHIGQINYY-IGFIAGIKAFTAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            SL        +L        G     +  +  F     +       I
Sbjct: 244 GSLPGAMLGGLVLGLTEAFATGYVSSDYEDVFAFLLLVLILIFRPSGI 291


>gi|295677099|ref|YP_003605623.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295436942|gb|ADG16112.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 428

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 45/326 (13%), Positives = 105/326 (32%), Gaps = 27/326 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L   +  ++            ++ +   Q    ++FA   ++++G  GLLS        
Sbjct: 13  ALAPWLALVIFLAVPPFIWPHSWLLAYLAQSATMIVFALSYNLLLGETGLLSFGHAAFAG 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GA     + +  G+ + LL  V  +    CG++ G  + +  G   A+ TL + E+   
Sbjct: 73  LGALIAARVFNAGGVPLVLLPVVGGIGGALCGVLFGFIATRRAGTAFAMITLGLGELVVA 132

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                     G+AG+ +                               Y ++   C +++
Sbjct: 133 AAWTLPGWFGGEAGVAI------------DRASGPLLGGWSFGPAREAYALIALWCVVAS 180

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L RT        +RDN     ++       +     +S+ F G+AG     + + 
Sbjct: 181 VAMFALSRTPFMRLANAVRDNPARAAAIGCYPRRVRYGVVVLSAFFAGIAGTLGLINIEL 240

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +S +      +  V+   ++GG  +         ++     +   +   +          
Sbjct: 241 VSTESVGMMRSGAVLIATVIGGTAAFFGPVAGAIVITFFSVVVASVTRAW---------- 290

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                   + +   +V++     L  
Sbjct: 291 -----LFYLGLFFVVVVMAAPDGLAG 311


>gi|302868842|ref|YP_003837479.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029]
 gi|302571701|gb|ADL47903.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029]
          Length = 316

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 88/306 (28%), Gaps = 20/306 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY------GLSIWLLI 96
             Q  IY + A G ++V G L L++      +  GA++ +   + +       +S    I
Sbjct: 18  LTQGAIYALVALGYTLVYGVLRLINFAHSEVFIAGAFAAIWTWNGFGLDQNSQVSGIGSI 77

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +++     I    +               +      LI     +   +  +     
Sbjct: 78  LFYLLVAMIVAAIASAGTATVIERVAYRPLRKRNAPPLAFLITAIGASIAISEAFGVYTR 137

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                  R +     F  + V  +      +     +  ++  ++ R+      R +  +
Sbjct: 138 RLPEGAPRLVSSEPLFHIAGVPIDAVQLLTIGSALVMMFALDQFINRSRTGRGIRAVAQD 197

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 +        L  F       G+AG  +      ++     F   +   +  +LG
Sbjct: 198 ANTAALMGVNKDRIILMVFIAGGTMAGVAGLLYDVRIQTLTY-SVGFLLGLKAFTAAVLG 256

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +L        +L  V     G+    +     F               L ++++ R 
Sbjct: 257 GIGNLRGALVGGLLLGVVENYASGLFGSQWKDFAAF-------------AVLVVLLMFRP 303

Query: 337 HSLLRL 342
             LL  
Sbjct: 304 TGLLGE 309


>gi|238755233|ref|ZP_04616578.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Yersinia ruckeri ATCC 29473]
 gi|238706574|gb|EEP98946.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Yersinia ruckeri ATCC 29473]
          Length = 308

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 85/305 (27%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMIGIDASWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
               +    +++                     +   I  I           +    R  
Sbjct: 72  LIGSAFVVAIVIASAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + V                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLVTGQWTLAESNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     L        +   + F               L  V+L+   
Sbjct: 251 IGSIPGAMIGGLILGVAEALTSAYLSTEYKDAVSF-------------ALLIAVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|218284074|ref|ZP_03489902.1| hypothetical protein EUBIFOR_02506 [Eubacterium biforme DSM 3989]
 gi|218215396|gb|EEC88934.1| hypothetical protein EUBIFOR_02506 [Eubacterium biforme DSM 3989]
          Length = 552

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/334 (11%), Positives = 90/334 (26%), Gaps = 24/334 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFL----GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           K    + ++ V   L +   +        +   I S+  Q    +  A G+S ++   G 
Sbjct: 224 KNGLYIAIILVFIFLCIITPIKKNGLQLFTVNNILSIMQQASPRMFLALGVSGLIMLAG- 282

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
             L+      +G  +  I+      +  +   V    +   G  + L  +          
Sbjct: 283 TDLSVGRMVGMGMTAATIIMHNGPNTGSVFGHVFDFSTMPVGGRILLALVVCVVLCTMFT 342

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           T+     F         I+     + +   + +    V         P   +     +  
Sbjct: 343 TIA--GFFAAKFKMHPFISTMANMLVIFGLVTYSTKGVSFGGIDQSIPGKIIPKVGGIPT 400

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++L        +     +T        +  N +A      ++    L AF ++    G  
Sbjct: 401 IILWAVAAVVIVWFIWNKTKFGKNLYAVGGNPEAASVSGISVFKVTLGAFIMAGILYGFG 460

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCC 299
                          +     +  I+  ++      GG+  +S +     I   +     
Sbjct: 461 SWLECIRMIGSGSAAYGQGWEMDAIAACVVGGVSFTGGIGKISGVVVGVLIFTALTYSLT 520

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
            +               N++     +I L  V L
Sbjct: 521 IL-----------GIDTNLQFVFSGIIILIAVTL 543


>gi|332524766|ref|ZP_08400963.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2]
 gi|332108072|gb|EGJ09296.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2]
          Length = 319

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 62/296 (20%), Positives = 122/296 (41%), Gaps = 14/296 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             ++ L + +FA   ++++G  GLLS      +A  AYS   L    G S  + I    +
Sbjct: 30  FVMKALCFAIFACAFNLLLGYTGLLSFGHAAYFAAAAYSTGWLVRSAGWSPEMGIVAGTL 89

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           I+ A G+++GL +++ +G Y A+ TL ++++   + ++    T G+ G+    R      
Sbjct: 90  IAAAVGLVVGLIAIRRQGIYFAMVTLALAQMVYFVFLQAP-FTGGEDGLQGVPRGT---- 144

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F    +  +  MYYV+L +     + I+ +  +      + IR+N+    
Sbjct: 145 ---------LFGVLPLADDRVMYYVVLAVFVAVFAAIIRIVHSPFGQVLKAIRENEPRAV 195

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   KL AF +S+A  G+AGA         +     +S +  V+ + +LGGM + 
Sbjct: 196 SLGYAVDRYKLLAFVLSTAIAGLAGALKTLVLGFATLSDAHWSLSGEVVLMTLLGGMGTF 255

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           +        +IG+          +   ++       +       +   L  + R  
Sbjct: 256 AGPVIGAFTIIGLQNFLADRVGSWVTVIIGAIFVACVVAFRRGFVGEALAWMQRRK 311


>gi|222149579|ref|YP_002550536.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221736561|gb|ACM37524.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 300

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 94/304 (30%), Gaps = 17/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G +G+++      + +G ++ +I+          +   
Sbjct: 8   LINGLTLGSIYGLVAIGYTMVYGIVGMINFAHGDIFMLGGFAALIVFLLLTTFFAGIPVA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A++      ++      +  + +A   L  S     ++            I VA     
Sbjct: 68  LALLIMLVVSMLMTGLWNWTIERVAYRPLRGSFRLAPLITAIGMSIALSNFIQVAQGP-- 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +    +    +   +    ++     L A+    + +T +  A R    ++K
Sbjct: 126 -RNKPIPALVNDVYHFGAITVSLKQMIIVAVTAVLLAAFWYIVNKTPLGRAQRATEQDRK 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       F + +A   +AG  +       S     F   +   +  +LGG+
Sbjct: 185 MAALLGVDVDRTISVTFVMGAALAAVAGTMYLMYYGVASFTD-GFIPGVKAFTAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        ++  +  L        +  +  F               L  V++ +   
Sbjct: 244 GSLPGAVLGGLLIGLIESLWSAYFTIAYKDVATFG-------------ILAFVLIFKPTG 290

Query: 339 LLRL 342
           +L  
Sbjct: 291 ILGR 294


>gi|212702036|ref|ZP_03310164.1| hypothetical protein DESPIG_00038 [Desulfovibrio piger ATCC 29098]
 gi|212674551|gb|EEB35034.1| hypothetical protein DESPIG_00038 [Desulfovibrio piger ATCC 29098]
          Length = 302

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 89/285 (31%), Gaps = 4/285 (1%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
             +  IY + A G ++V G + L++      Y +GA++ +++    G+  +    +  + 
Sbjct: 14  LTRGSIYALIALGYTLVYGIIELINFAHGEIYMLGAFTALLVAGVLGIVGFPAGGILIVA 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           + A  +                          + LI    ++       +  +       
Sbjct: 74  ALAAVVWSAAYGYTLEKVAYKPLRGA---PRLSPLISAIGMSIFLQNYVLLAQTSDYVPF 130

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
            R L           I     + +L+       S+ L++R T +  A R    N+K    
Sbjct: 131 PRLLPDMEFLDYLGNIMGPSDFLILVTSTLAMVSLSLFIRYTRMGKAMRATAQNRKMALL 190

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L           F V SA   + G   A+   +++     F   +   +  +LGG+ S+ 
Sbjct: 191 LGINADRIISLTFIVGSALAALGGVLIASHMGQVNF-GIGFLAGLKAFTAAVLGGIGSIP 249

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
                  +L     +  G     +   L F     +       I 
Sbjct: 250 GAMVGGLVLGIAESMTTGYLSGNYEDALAFALLILILIFRPDGIL 294


>gi|163858227|ref|YP_001632525.1| putative permease component of branched-chain amino acid transport
           system [Bordetella petrii DSM 12804]
 gi|163261955|emb|CAP44257.1| putative permease component of branched-chain amino acid transport
           system [Bordetella petrii]
          Length = 426

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 61/329 (18%), Positives = 116/329 (35%), Gaps = 34/329 (10%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L       L L        + + +  IQ+LI  +FA   +++ G  G+LS      + +G
Sbjct: 5   LIACLAGALVLAALPFLLSQGLLNAAIQMLIAALFASAYNLLCGQAGMLSFGHAAYFGVG 64

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIM----GLPSLKFRGDYLAIATLIMSEIF 133
           A++ V   +  G +  L  P+  +     G++     G  + +  G Y A+ TL ++E+ 
Sbjct: 65  AFATVHAMNAVGGAGLLPTPLMPLAGAVGGLVFGGIAGWFATQRSGTYFAMITLAIAELV 124

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
            ++    K I  G+AGI       +      +                 +YY+ L     
Sbjct: 125 HSLAPHLKGIFGGEAGISTMRMPAWGFDFGSTTQ---------------VYYLTLAWVLA 169

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           + +++    RT +      +R+N      L   +       FA+S+ F GMAG     S 
Sbjct: 170 AMTLLFLYTRTPLGRLTLGLRENSHRLKFLGYNVHGLSTLVFAISAMFSGMAGGLQVLSN 229

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           +  +  +F  S +   +    +GG+      A   A++         +   +        
Sbjct: 230 ESANYVVFDASLSAAAVLNAYIGGVQVFLGPAFGAALMTFFGYAISDLTRSW-------- 281

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                       I   LV++     L  L
Sbjct: 282 -------LLYQGILFVLVMMFLPTGLTGL 303


>gi|91778398|ref|YP_553606.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91691058|gb|ABE34256.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 305

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 90/305 (29%), Gaps = 17/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++   GL+++ G +G++++       IGAY+  +             P+   +
Sbjct: 18  LSLFSVLLLMGLGLAVIFGQMGVINMAHGEFMTIGAYTIYMFSQLADNYWHGFAPLYFPL 77

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +      +   +       L     +       +L  W      +           +  T
Sbjct: 78  AICAAFALAFAAGWVAEWAL--IRHLYRRPLDTLLATWGLSLGMQQVFRSVFGPKEVSPT 135

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P   +   I   +V+     ++  ++L L R+      R    N++   +
Sbjct: 136 LPDWLMGSWSPKPGLDIPINGLFVMSLAVVMTGGVLLALYRSRWGLRVRATVANRQMANA 195

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     G+AGA F A     +         +    +V  GG  SL 
Sbjct: 196 AGIDTRKTDRLTFAIGCGMAGVAGAAFTAIGS--TGPTSGSLYIVDSFLVVTFGGAASLL 253

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +  +  +                         + ++ + +V+++R   L   
Sbjct: 254 GTVASAFGIAQMQSISEFFM-------------TGSSARVVTLLTIVIVLMLRPQGLFAS 300

Query: 343 RTPSN 347
           +    
Sbjct: 301 KVRRA 305


>gi|163782934|ref|ZP_02177929.1| inner-membrane translocator [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881614|gb|EDP75123.1| inner-membrane translocator [Hydrogenivirga sp. 128-5-R1-1]
          Length = 306

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 49/317 (15%), Positives = 108/317 (34%), Gaps = 35/317 (11%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
             G +    Y+  +    L+    A   ++++G  G  +   +  + +G+Y+  +L    
Sbjct: 24  VAGDSLPSGYLLRVFSSALMLTSLALSQNVLLGYTGYPAFGGIAFFGVGSYAAGVLSKSL 83

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           G+  +L IP+  ++S    + +    ++ R  Y AIATL +      ++   +       
Sbjct: 84  GMPFYLSIPLGGIVSALIALAVAPVLMRLRSHYFAIATLALQLALAEMVANLEFTGGSYG 143

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                 R                     V+ +   Y + L +      + +++ R+    
Sbjct: 144 INLPIYR--------------------GVMEDYVFYLLFLFLTAGLFFLNVYIDRSVFGY 183

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENI 267
           A + IR+++ A  +L    +  K  +F + +   G+AG  +A     I P   F    ++
Sbjct: 184 ALKAIREDELAAETLGVNTLVFKSVSFTLMALTTGLAGGVYAYWITYIDPPSVFDPLLSV 243

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
                ++LGG+ S          L  V E+           +L       +         
Sbjct: 244 KTFVALLLGGVGSTVGPVLGAFFLELVSEVVWSRLLELHGVVLGALIVLVVLLL------ 297

Query: 328 LFLVILMRSHSLLRLRT 344
                      ++ +R 
Sbjct: 298 --------PRGIVGVRR 306


>gi|90422357|ref|YP_530727.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90104371|gb|ABD86408.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 345

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 57/334 (17%), Positives = 130/334 (38%), Gaps = 27/334 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +   V   L+F  +G  +  ++   +G + LI+   A  + I++G  GLLSL   + +
Sbjct: 31  VLVALFVVAALIFAAVGVLQDDRFFLRLGTEALIFAGLALSVDILLGYSGLLSLGQALYF 90

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY   +   +   S W  +  + ++S   G + GL + + RG Y A+ T  ++++  
Sbjct: 91  GLGAYVSAV-VLKEVPSFWAAMAAALLVSLVIGFLAGLIANRVRGVYFALVTFGLAQVAA 149

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +   + +                   V  +       +         +   LG   L 
Sbjct: 150 RAVYNTRSL-----------GASDGLIGVPVVPIDLGVFTVMSNSPAGFFLFTLGFIVLL 198

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++  +L  T        +R N++   SL  +    +LSA+ +++    ++GA +   R 
Sbjct: 199 YAVCAYLLDTPFGRVLLALRANERRVPSLGYSTRNLRLSAYVLAAVIASLSGALYPMLRG 258

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            +SP++  F+ +   +  V++GG+ +L+       IL  +  +   +  +          
Sbjct: 259 FVSPELLFFTTSGNAVITVVIGGVGTLAGALYGGVILTVLKSVIGSLTEH---------- 308

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                H  ++ +     ++     L+ +  P   
Sbjct: 309 -----HLIVIGLLFMATVIFLPKGLMGVVRPLVE 337


>gi|206575778|ref|YP_002237858.1| hydrophobic amino acid ABC transporter, permease protein
           [Klebsiella pneumoniae 342]
 gi|288934787|ref|YP_003438846.1| inner-membrane translocator [Klebsiella variicola At-22]
 gi|290508912|ref|ZP_06548283.1| branched-chain amino acid transport system permease [Klebsiella sp.
           1_1_55]
 gi|206564836|gb|ACI06612.1| hydrophobic amino acid ABC transporter, permease protein
           [Klebsiella pneumoniae 342]
 gi|288889496|gb|ADC57814.1| inner-membrane translocator [Klebsiella variicola At-22]
 gi|289778306|gb|EFD86303.1| branched-chain amino acid transport system permease [Klebsiella sp.
           1_1_55]
          Length = 304

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 85/304 (27%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y + AY   I  +          P+
Sbjct: 9   LINGLTLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMVSAYLCAIGLALLSFFGIHSFPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +    +++                   + +   I      +               
Sbjct: 69  LIFATLVFTIVVTGVYGWAIERIAYRPLRNSTRLAPLISAIGMSLILQNYVQLSQGPNQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+ S           V       ++L+       ++   ++ T +    R  + +++
Sbjct: 129 GIPTLLSGALRMTVGDGVVQITWTKVFILVAALVGMLTLTWIIQYTRLGRICRATQQDRR 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A  G+AG     +          F   I   +  +LGG+
Sbjct: 189 MAAILGINTDRVISLVFVIGAAMAGLAGVLVTMNYGTFDFY-IGFIIGIKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        +L        G+    +  +  F               L  +++ R   
Sbjct: 248 GSLPGAMLGGLLLGVAEAQFAGLVNSDYKDVFSF-------------ALLVAILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|256379542|ref|YP_003103202.1| inner-membrane translocator [Actinosynnema mirum DSM 43827]
 gi|255923845|gb|ACU39356.1| inner-membrane translocator [Actinosynnema mirum DSM 43827]
          Length = 320

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 94/311 (30%), Gaps = 25/311 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-----------YGLS 91
            +   IY + A G ++V G L L++      + IG  + ++  +                
Sbjct: 17  LVIGSIYALVALGYTMVYGVLRLINFAHSEIFMIGTMASLVTITAIAPATPLTGVALIGV 76

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + LLI VS  +SG   +++   + +      A     +       L   +          
Sbjct: 77  MVLLILVSGAVSGGAAVLLEFVAYRPLRRKGATRLTALISAIGASLFLQELFALVVIPWL 136

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                    +  R + R   F             V++    +  ++   + +T I    R
Sbjct: 137 TGKPGRNQQSAARVVDRETLFTIGNADVRTDHVIVIVAAVVMMVALDRLVNQTKIGRGIR 196

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
               + +A   +   I       F +     G+AGA +    +  +     F   I   +
Sbjct: 197 ATAQDPEAAVLMGVNIDTIVRITFLLGGTMAGVAGALYLMEYEN-TVYNVGFVLGIKAFT 255

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             +LGG+ +L         L  +           +  ++ F               L +V
Sbjct: 256 AAVLGGIGNLRGALLGGITLGLIENWGAIFLGSEWKDVIAFT-------------VLVIV 302

Query: 332 ILMRSHSLLRL 342
           ++ R   +L  
Sbjct: 303 LMFRPTGILGE 313


>gi|78355658|ref|YP_387107.1| high-affinity branched-chain amino acid ABC transporter permease
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
 gi|78218063|gb|ABB37412.1| L-valine ABC transporter membrane protein / L-isoleucine ABC
           transporter membrane protein / L-leucine ABC transporter
           membrane protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 302

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 88/288 (30%), Gaps = 4/288 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
                 +  IY + A G ++V G + L++      Y IGA++ +I     G+  + L+ +
Sbjct: 10  FLGGLTRGSIYALIAIGYTMVYGIIELINFAHGEIYMIGAFTGLITAGVLGIYGFPLLAI 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+      +                    M       LI    ++       +  +   
Sbjct: 70  LAVAVVVAIIYSAAYGYTLEKIAYKPLRGSMRLAP---LISAIGMSLFLQNYVILAQTSD 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +  F        I+      ++    F  A + L+++ T +  A R    N+K
Sbjct: 127 FLPFPALVPDFAFMEPIAHIFASSDLLIVATSAFSMAGLTLFIKYTRMGKAMRATAQNRK 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + S+   + G   A+   ++S ++  F   I   +  +LGG+
Sbjct: 187 MAMLLGIDADRIISITFIIGSSLAALGGVLIASHVGQVSFNV-GFLAGIKAFTAAVLGGI 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            S+         L        G     +  +  F             I
Sbjct: 246 GSIPGAMAGGLFLGLSESYATGYISSDYEDVFAFLLLVLFLIFRPSGI 293


>gi|330813765|ref|YP_004358004.1| branched-chain amino acid transport system permease protein LivM
           [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486860|gb|AEA81265.1| branched-chain amino acid transport system permease protein LivM
           [Candidatus Pelagibacter sp. IMCC9063]
          Length = 355

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/338 (12%), Positives = 100/338 (29%), Gaps = 32/338 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +   +L F  +       Y        L+ ++ A   +I  G +G  +   ++ + +G
Sbjct: 10  LFIYLGVLAFALIAPNVFSDYRIQ-FTFWLVLIILAITWNIQGGEMGYNTFGNIMFFGVG 68

Query: 78  AYSY-----------VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            Y                    G   ++  P         G++            +    
Sbjct: 69  MYVCSGIQIGLFFDLAEWTVSGGEKTFIHTPDQYFQGLWIGLLAAAIIPAIIALIIGYGV 128

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L +   +  I           +G               +   + +          F YY+
Sbjct: 129 LGLRGHYFAIC---TLGIGIASGEIAGGIELIGAGQGMTAPPWPKDIGGTEYRNEFFYYL 185

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            L +  ++   I WL  T        IRDN+    ++    +  K++ + +S+ F+G+AG
Sbjct: 186 TLALFVMTFVFIKWLYSTRFRLVLNAIRDNEDKAEAMGIETMRYKITGWVISAFFVGLAG 245

Query: 247 AF---FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
                     + +          + ++ + ILGG  +L       ++     E       
Sbjct: 246 GLVGNIVGYIEPVEVAFDGREMGVFMVLMCILGGKGTLWGPVIGASVFHIFKE------- 298

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   F   F       + + + ++++     ++ 
Sbjct: 299 -------SFWSFFLGWQYVALGVLIIVIVVYLPEGIMG 329


>gi|251791614|ref|YP_003006335.1| branched-chain amino acid transporter permease subunit LivH
           [Dickeya zeae Ech1591]
 gi|247540235|gb|ACT08856.1| inner-membrane translocator [Dickeya zeae Ech1591]
          Length = 308

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 88/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDAGWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
              ++    +++                     +   I  I           +    R  
Sbjct: 72  LISVAFIAAVVISSAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLTQGSRDV 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + V                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLVHGQWVLGESNGFAATLSSMQLTIWVVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L  +        F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGISTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     L        +  ++ F               L  V+L+   
Sbjct: 251 IGSIPGAMIGGLILGIAESLTSAYLSTEYKDVVSF-------------ALLIGVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|325293777|ref|YP_004279641.1| branched chain amino acid ABC transporter transmembrane protein
           [Agrobacterium sp. H13-3]
 gi|325061630|gb|ADY65321.1| branched chain amino acid ABC transporter, membrane spanning
           protein [Agrobacterium sp. H13-3]
          Length = 300

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 102/313 (32%), Gaps = 35/313 (11%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI------ 92
           + +      IY + A G ++V G +G+++      + +G ++ +I+              
Sbjct: 8   LINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLIATSFFAGIPVA 67

Query: 93  ---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
               L++ V+ +++G    ++   + +       +A LI +      L  +  +T G   
Sbjct: 68  LLLILMMVVAMLMTGLWNWVIERVAYRPLRGSFRLAPLITAIGMSIALSNFIQVTQGPRN 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             +   +               +    +   +  + ++     L  +    + +T +  A
Sbjct: 128 KPIPSMVT------------ESYHFGSITVSLKQFIIMAVTSVLLFAFWYIVNKTPLGRA 175

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +A   +AG  +       S +   F   +  
Sbjct: 176 QRATEQDRKMAALLGVDVDKTISITFIMGAALAAVAGTMYLMYYGVASFND-GFIPGVKA 234

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +  L        +  +  F               L 
Sbjct: 235 FTAAVLGGIGSLPGAVLGGLLIGLIESLWSAYFSIAYKDVAAFG-------------ILA 281

Query: 330 LVILMRSHSLLRL 342
            V++ +   +L  
Sbjct: 282 FVLIFKPTGILGR 294


>gi|57242113|ref|ZP_00370053.1| branched chain amino acid ABC transporter, permease protein
           [Campylobacter upsaliensis RM3195]
 gi|315638171|ref|ZP_07893353.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Campylobacter upsaliensis
           JV21]
 gi|57017305|gb|EAL54086.1| branched chain amino acid ABC transporter, permease protein
           [Campylobacter upsaliensis RM3195]
 gi|315481707|gb|EFU72329.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Campylobacter upsaliensis
           JV21]
          Length = 298

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 94/303 (31%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++        + AY+ +   +   +     + +
Sbjct: 10  LVNGFSLGSMYALIAVGYTMVYGVLRLINFAHGDIMMVSAYAALFCITSLNVPFLGALSL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+     + K       I+ LI +      L     +             YF
Sbjct: 70  AMIFAMVVGIATDKIAYKPLRKAPRISLLITAIGISFFLQNLFNMLFTSTPKAFLPPAYF 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V        V L    +   ++L L ++    A R +  + +
Sbjct: 130 EEL----------INMGGVSVTFGSLLVPLITFIIVVIVLLILYKSKYGIAIRALAFDVQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           FA+ SA   + G F+A+    I+P M      +   +  +LGG+
Sbjct: 180 TVNLMGIDANRIIAMVFALGSALAAVGGVFWASMYYSITPTMGTLI-GLKAFAAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+     +            + F    +        I L  ++L +   
Sbjct: 239 GSVVGAVIGGLIIGLTEVI-----------AVAFFPELSGFKDAFAFIFLVFILLFKPTG 287

Query: 339 LLR 341
           +L 
Sbjct: 288 ILG 290


>gi|238763652|ref|ZP_04624612.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Yersinia kristensenii ATCC 33638]
 gi|238698130|gb|EEP90887.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Yersinia kristensenii ATCC 33638]
          Length = 308

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 85/305 (27%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y I +Y   I+ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFIVIAALMMVGIDASWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
               +    +++                     +   I  I           +    R  
Sbjct: 72  LIGSAFLVSIVIASAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLNQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + V                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLVTGQWTLAETNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     L        +   + F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLILGVAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|158423735|ref|YP_001525027.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158330624|dbj|BAF88109.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 323

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 53/330 (16%), Positives = 113/330 (34%), Gaps = 29/330 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +L ++  ++L   L    +     +  + +LI  + A G +++ G  G  S      + 
Sbjct: 4   GILPLLALVVLIAALPLVTASNTAINFVVFVLIIALGAQGWNLLGGVGGQFSFGHAAFFG 63

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIF 133
            GAY   +L +R+G++ W+       +    G ++G  S +   RG Y A+ TL  +E+ 
Sbjct: 64  TGAYVSAVLQARFGVNAWVAFAAGVAMGALVGWVIGFLSFRAGLRGSYFALVTLAFAEVL 123

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           + +                       G     L       +          ++ L +   
Sbjct: 124 RILANAL---------------PITGGGAGLLLKLDLGLGNFQFSSRAVFLWIALALVAA 168

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              +  W+  +        +R+N+ A  +L   ++  KL A  +S A    AGAF+    
Sbjct: 169 GLLLCRWIADSRFGAQLVAVRENEDAARALGVDVLKVKLKAITLSGALTAAAGAFYLQYF 228

Query: 254 DRISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
             +  +  +    ++ V+   ++GG  ++         L G+ ++               
Sbjct: 229 LYLDANIAYGVWISVEVLLAAMVGGRGTVLGPLVGAFALHGLGDVTKQYAG--------- 279

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                     +    L  V+      L+ L
Sbjct: 280 --GIPGIDLAVYGAVLIFVVAFAPSGLIGL 307


>gi|289523481|ref|ZP_06440335.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503173|gb|EFD24337.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 297

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 94/305 (30%), Gaps = 22/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      +Y + A G S+V G L L++      + +GAY      +   L   + +P 
Sbjct: 10  FLNAVTLGSLYALIAIGYSMVYGILRLINFAHGEIFMLGAYFVFWGTTLLHLPWLVAVPT 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  ++  CG+++   + +   D   I+ LI +      L  +  +           R  +
Sbjct: 70  AIAVTALCGVLVDRCAYRPLRDAPRISALISAIGVSFFLQNFAIVVFSA-----IPRPVY 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + + I         +   +     +L        ++  + +T    A R I  + +
Sbjct: 125 RPGWLVTPILIQGVHFLPLTLVVPFISFVL-----MLVVLYIVYKTKPGLAMRAISKDIE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +  ++       F + SA    +G  ++    ++   M             ++GG+
Sbjct: 180 TSRLMGVSVDQIVAITFMIGSALAAASGIMWSLRYPQV-HPMMGMIPGFKAFIAAVVGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L  +  +              F     +    L           R   
Sbjct: 239 GSIQGAVIGGMLLGFIEIMIVAFFPNLSGFKDAFAFVLLIFLLLL-----------RPTG 287

Query: 339 LLRLR 343
           ++  R
Sbjct: 288 IMGER 292


>gi|254695126|ref|ZP_05156954.1| branched-chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella abortus bv. 3 str. Tulya]
 gi|261215481|ref|ZP_05929762.1| predicted protein [Brucella abortus bv. 3 str. Tulya]
 gi|260917088|gb|EEX83949.1| predicted protein [Brucella abortus bv. 3 str. Tulya]
          Length = 570

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91
               KY   +   + I  +    L +V G  G++SL  +    +GA+ +  +        
Sbjct: 24  LGFPKYWVFLITAMFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + + + +  + +   G+ +GLP+L+ RG  LAI TL  +  F  +L              
Sbjct: 84  LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 133

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                       +   +  +L    + A ++ ++  + +  +W 
Sbjct: 134 ----------FPGQTSFTQVARPDLFASDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R +++A  +   +I  AKLSAFA+S+   G++G   A     +  + F   +++ + +
Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  + G            +++   EL   +N       + F       
Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291


>gi|301166940|emb|CBW26519.1| putative transport system permease protein [Bacteriovorax marinus
           SJ]
          Length = 299

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 86/297 (28%), Gaps = 13/297 (4%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 +Y+ +   Q  IY + A G ++V G + L++      Y IG +         G+
Sbjct: 8   FFWDLGQYLLNGLTQGSIYALIALGYTMVYGIIKLINFAHGEFYMIGGFI-GFYTIAAGV 66

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + L  P++ + +G   +I+     +       I  LI +            +  G    
Sbjct: 67  PLTLAFPIAMVGAGVIAVIIERIVYRPIRSAGRIPALITALGTSLFFQYTGQLVIGADAK 126

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                         + I+   +    ++       +L+    L   +   + +T I  A 
Sbjct: 127 A-----------FPTAIKQHTWFVGELMISNIQVIILVSTFILMIFLWWLVNKTRIGKAM 175

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           +    N  A   +           F V +A  G AG         +   M      +   
Sbjct: 176 KATSYNHDAAELMGIDTNKIISFTFFVGAAMAGAAGVLVGMYYSTVE-PMMGLIPGLKAF 234

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              +LGG+  +         L     L  G     +   + F     +       I 
Sbjct: 235 IAAVLGGIGIIPGAVIGGLTLGVAENLVVGFWESTYRDGIAFLILILILLVKPAGIL 291


>gi|256829003|ref|YP_003157731.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
 gi|256578179|gb|ACU89315.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
          Length = 316

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 111/322 (34%), Gaps = 31/322 (9%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY--------------V 82
           + I +      +Y +FA G ++V   LG+++      + +GAY                 
Sbjct: 8   QNILNGLSIGSVYAIFALGYTLVFSILGIINFAHGAVFTLGAYCTYALAVGDFGLNGLLA 67

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
            +   + L   + +   ++++G  G+++   + +      A   L +       LI    
Sbjct: 68  GMSLPFSLPFPVALLGGSVMAGFVGVLVERLAFRPLRAKGADPLLALVSSLGVALILVNC 127

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +         +      G+    +   F+     +        +L     +   +  ++ 
Sbjct: 128 LQFLVGAEIYSFPSDIFGS--LPMAMIFKMDGKILAVRTVQLIILGVSLAMLLVLAWFMN 185

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           RT +  A +   +N +    L   +    LS F +S A  G+AG    AS     P  F 
Sbjct: 186 RTRMGKALQATAENPETASLLGINVDRYILSTFFISGALGGLAGTLIGASFGLAGPY-FG 244

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            S  +  +++++LGG+ S+        ++                        ++     
Sbjct: 245 VSYGLKGLAVIVLGGLGSIPGAVLGGLVIGLGEAFL--------------PPDYSSMKEA 290

Query: 323 LMVIALFLVILMRSHSLLRLRT 344
           +  + LF+++L R   LL  +T
Sbjct: 291 VAFVMLFVILLARPQGLLGQKT 312


>gi|89054757|ref|YP_510208.1| inner-membrane translocator [Jannaschia sp. CCS1]
 gi|88864306|gb|ABD55183.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Jannaschia sp. CCS1]
          Length = 288

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 69/283 (24%), Positives = 106/283 (37%), Gaps = 40/283 (14%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
            +V   G+ SL       IGAY+  IL    G    + I    ++     M++ +P  + 
Sbjct: 26  FIVLRAGVFSLATAAFAGIGAYTAAILAVDIGAHPVIGILCGTLMGMLVAMVLSIPLARL 85

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           RG Y AIAT+   +I  ++ I  + +TNG  GI    +    GT                
Sbjct: 86  RGVYQAIATVAFIQICLSLNIYAEGLTNGAMGINSIPKTVGTGT---------------- 129

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                    L     L+  +I  + +  +  A+ TIR ++    SL  +I   ++ AFA+
Sbjct: 130 ---------LFVFAALATYLIWAIEKGRLGRAFNTIRQDEAVAASLGISIRKHQMLAFAI 180

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           S A  G+ G   A     I P  F F   I ++S VI GG  S+       A LI + EL
Sbjct: 181 SGALAGLFGGLEAYHSYAIDPRQFGFHLLITILSYVIFGGRNSVIGPLAGAAFLIILPEL 240

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
              +                     +  I L LVI      + 
Sbjct: 241 ARPLAE---------------NRMVIYGIMLILVINFMPKGVA 268


>gi|238784409|ref|ZP_04628419.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Yersinia bercovieri ATCC 43970]
 gi|238714701|gb|EEQ06703.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Yersinia bercovieri ATCC 43970]
          Length = 308

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 85/305 (27%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y I +Y   I+ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFIVIAALMMMGIDASWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
               +    +++                     +   I  I           +    R  
Sbjct: 72  LIGCAFLVSIVIASAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + V                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLVTGQWTLAETNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     L        +   + F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLILGVAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|239623651|ref|ZP_04666682.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521682|gb|EEQ61548.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 553

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/318 (9%), Positives = 82/318 (25%), Gaps = 9/318 (2%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y  I+ +   +      +      +   I ++  Q    +  A G++ ++   G   L+ 
Sbjct: 230 YIAIILIFIGLCIAAPVVKNVKLLTYNNILNILQQASPRMFLALGVAGLILLTG-TDLSI 288

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +G  +  I+  +   +  +   V        G+ +           L      + 
Sbjct: 289 GRMVGMGMTTATIIMHQGINTGAVFGHVFDFTGMPIGLRVVFALFM--CIVLCTCFTAIG 346

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             F         I+     + +   + +    V         P   +        ++L  
Sbjct: 347 GFFTAKFKMHPFISTMANMLVIFGLVTYATKGVSFGAIEPAIPKMIIPKVNGFPTIILWA 406

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 +     +T        +  N +A      ++    + AF ++    G       
Sbjct: 407 VAAIVIVWFIWNKTTFGKNLYAVGGNPEAAAVSGISVFGVTMGAFILAGILYGFGSWLEC 466

Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A         +     +  I+  ++      GG+  +S +     I   ++     +   
Sbjct: 467 ARMVGSGSAAYGQGWEMDAIAACVVGGVSFTGGIGKISGVVVGVLIFTVLIYSLTILGID 526

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +          T 
Sbjct: 527 TNLQFVFEGIIIITAVTL 544


>gi|149203223|ref|ZP_01880193.1| ABC transporter, membrane spanning protein [Roseovarius sp. TM1035]
 gi|149143056|gb|EDM31095.1| ABC transporter, membrane spanning protein [Roseovarius sp. TM1035]
          Length = 370

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 104/344 (30%), Gaps = 27/344 (7%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +    L  L +   +++           +  +   + L   + +  L++  GS GLL+L
Sbjct: 3   TRLYYDLAALVLFALVIVLGVPALMGFDGFELNTFARYLALAIVSLALALSWGSAGLLNL 62

Query: 69  NCVIAYAIGAYSYVILG-------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
                + +G+Y+  +         +      W  +P   ++      +            
Sbjct: 63  GQAATFGMGSYAMAMHLKLKASGEALPDFMGWNNVPELPLLWAPFHSLGFTLLAGLLVPA 122

Query: 122 LAIATLIMSEI------FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                + +             +I    +   +  +     +      +  L        +
Sbjct: 123 FVGGLIAIFMFRARIAGVFVAIITLAFLVAFQLVVIEQQGITGGQNGLTGLAPLSLMGWT 182

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
              Y +  YY++ G    + +  L+L  +      R IR++          +   +   F
Sbjct: 183 VDTYGVGFYYLVAGCLMAAVTFGLYLTHSKFGLILRAIREDADRTRFFGYNVANYQTVIF 242

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            +S+A  G +G  +    +  SP     S ++ ++    +GG  S+   A    I+  + 
Sbjct: 243 CISAALAGWSGMLYTLVLEFASPTYMSVSFSLAIVIWCAVGGRDSVIAAAIGAIIVNLLE 302

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
                +              F      ++ +   LV++     L
Sbjct: 303 GRLSDV--------------FVEGWNLMLGVIFVLVVMFMPRGL 332


>gi|89069329|ref|ZP_01156688.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
 gi|89045096|gb|EAR51167.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
          Length = 298

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 97/303 (32%), Gaps = 21/303 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +       Y + A GL+IV   +GL++       A G YS  ++G+    +  +L+  
Sbjct: 8   FLNALSFGAEYALIALGLAIVFSIMGLVNFAHGEVIAFGGYSLAVVGTILTGNPLILMGF 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +   A  +++   + +   D      L+ +     IL     +      +     ++ 
Sbjct: 68  VLLACVAVAVLLEKVAFRTVRDADITTGLLTAFGVSIILQNVFLLLGSPRPVAATQLIFL 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T               V       Y  +      A + L+L R+ +  A R    + +
Sbjct: 128 DRT----------LWLGPVQVSSLQIYETVATILAIAGLGLFLTRSNLGIAMRAAARDFE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                          AFA+S    G+A  F  A R   +P M  F   +      ++GG 
Sbjct: 178 MVRLCGLRANRVVSGAFAISGLLAGLACIFIMARRGSAAPHM-GFDPVLTAFVACVVGGF 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        +L  +              L+    S+       +   + LV++ R   
Sbjct: 237 GSLPGAVLGGFLLGFLE----------VGMLVLLPQSYGGLARAAVFAMVALVLIWRPDG 286

Query: 339 LLR 341
           +L 
Sbjct: 287 ILS 289


>gi|238927651|ref|ZP_04659411.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Selenomonas flueggei ATCC
           43531]
 gi|304438256|ref|ZP_07398197.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Selenomonas sp. oral
           taxon 149 str. 67H29BP]
 gi|238884576|gb|EEQ48214.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Selenomonas flueggei ATCC
           43531]
 gi|304368622|gb|EFM22306.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Selenomonas sp. oral
           taxon 149 str. 67H29BP]
          Length = 294

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 90/303 (29%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G +++ G + L++      Y +GAY      +     +  ++  
Sbjct: 11  LINGISLGSIYALIALGYTMIYGIIKLINFAHGDIYMVGAYLGFYAITLGIPVVPAILIS 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+ S    ++  L     R        +    +   +               +   +  
Sbjct: 71  MAVTSLLGVVVERLAYRPLRHAPRISVLITAIGVSFLLE------------YVMMAIVSP 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T  + +    F    +I       ++     L   +   +R T I  A R    + +
Sbjct: 119 TPRTFPATLSDVSFDLGGLIISGQQMLIMGVTLLLMLILTYIVRSTKIGKAMRAASYDTE 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +           FA+ SA   +AG       + I P M      I      + GG+
Sbjct: 179 AAQLMGINANRIISITFAIGSALAAVAGVLIGIYYNSIDPLM-GIMPGIKAFVAAVFGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L        +L  V     G+ F  F     F               L LV+L+R   
Sbjct: 238 GILPGAVVGGIVLGIVEAFISGLGFSMFRDAAAF-------------AILILVLLIRPAG 284

Query: 339 LLR 341
           +  
Sbjct: 285 IFG 287


>gi|83311558|ref|YP_421822.1| ABC-type branched-chain amino acid transport system, permease
           component [Magnetospirillum magneticum AMB-1]
 gi|82946399|dbj|BAE51263.1| ABC-type branched-chain amino acid transport system, permease
           component [Magnetospirillum magneticum AMB-1]
          Length = 330

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 52/308 (16%), Positives = 107/308 (34%), Gaps = 22/308 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY--GLSIWL 94
            Y+ S+ + ++ +       +I++G  G LSL   +   +GAY+   L        ++ L
Sbjct: 24  PYLLSVLVVVMYFAYVGQAWNIMMGFAGQLSLGHTLYVGLGAYTAGALFVHLGVPAALGL 83

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
              V+A +     +         +G Y A+ T+  +E  + +      +           
Sbjct: 84  FAAVAAAVLVGGAVGALGFRFGVKGVYFALLTIAFAEFTRILFEHIPGLGGPGGLFLPVG 143

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
               +                     +  YY++L M      +   L R+ +   W  +R
Sbjct: 144 DRTGIDLIHLRGH------------PLMFYYLILAMTVGIFLLCRKLVRSRLGYTWLAVR 191

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVISIV 273
           ++Q+A  +L   +  AKL A  +S+    + G FFA   + + P+  F  + +I +I   
Sbjct: 192 EDQEAAAALGINVFRAKLYAVMLSAGLTALGGVFFAFYYNNLFPNQAFGMNRSIEIILAP 251

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           I+GG+ +L        IL  + E                             ++L  ++ 
Sbjct: 252 IVGGLGTLFGPILGALILTPLGEGITMATE-------ALGFKAAGIKQLCYGLSLLAIVK 304

Query: 334 MRSHSLLR 341
                +  
Sbjct: 305 FLPDGVWP 312


>gi|187477449|ref|YP_785473.1| ABC transporter permease [Bordetella avium 197N]
 gi|115422035|emb|CAJ48558.1| ABC transporter, permease protein [Bordetella avium 197N]
          Length = 321

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 58/328 (17%), Positives = 119/328 (36%), Gaps = 31/328 (9%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           LL +       +   A        +  +  L   + +   +I+ G  G LS    + + +
Sbjct: 5   LLTIALFGAALVAATALTESGVALTFVMMSLYAALLSQAWNILGGYGGQLSFGHALFFGV 64

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQ 134
           GAY+  +     G++ WL +P++  +    G+ +G  + +   +G Y A+ TL  +E+F+
Sbjct: 65  GAYAQALAQLNLGINPWLALPMAIALGALVGLAVGGLTFRYGLKGSYFALVTLAFAEVFR 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +       G   +                       +          Y+LLG   L+
Sbjct: 125 ILALSVSFTGGGAGLMLPLQ---------------EGVANMQFGSRRGYIYLLLGFVLLA 169

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +  WLR +      + +RDN+ A  ++    +  KL   A+S+AF+  AGAF+     
Sbjct: 170 LLVTAWLRHSRFGAYLQAVRDNEDAARAIGVNPLRVKLGGIALSAAFMSAAGAFYVQVFQ 229

Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
            I P   F  + ++  +   I+GG+ +L         L  + +L   +            
Sbjct: 230 YIDPGIAFGTAVSVEALVGAIVGGLGTLWGPLLGAVTLHALSDLTRNLFG---------- 279

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    +  + L +  +     +  
Sbjct: 280 -ELPGISMVIYGVVLIV--MFLPRGITG 304


>gi|13507188|gb|AAK28501.1|AF315580_8 amino acid transport BraE-like protein [Agrobacterium tumefaciens]
          Length = 346

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 95/324 (29%), Gaps = 18/324 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V   +L    L       +        ++  + A  L++  G  G+L       + +G 
Sbjct: 14  IVSAIILALTILLPATLDLFTILQLTVFVVMGVLALSLALSWGLGGILCFGQAAFFGLGG 73

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y I    +G S   ++   A+ +    ++     +    +       +   +     I
Sbjct: 74  YTYAIAVINFGESTLPVLLAIAVPALFALVLGWFMFMGRLSELYVGVITLCVSLILYNFI 133

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                   + G    +                 F     +    M+ +++    L   + 
Sbjct: 134 NSTSDPWYRIGKAQING---FNGMSSVPTLNIPFSPDAWLTPNQMFVLVMVSLLLVYLMC 190

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
            ++  ++        R N+     L       KL  F + SA  G AG  F      ISP
Sbjct: 191 KFVAASSWGRVVAATRQNEVRAELLGYDTARIKLGIFVLGSAVAGYAGCLFTNWNAFISP 250

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           ++F  S +  +I  +I+GG  +          L  +                       +
Sbjct: 251 NVFSLSMSAQIIIWMIVGGRETFIGPVIGAIALQYLTTRLGS---------------SGL 295

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                +   L L +++    L+  
Sbjct: 296 NANVALGAILMLFVVLVPRGLVPT 319


>gi|317404503|gb|EFV84912.1| hypothetical protein HMPREF0005_02466 [Achromobacter xylosoxidans
           C54]
          Length = 304

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 98/308 (31%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +  + A GL+++ G +G+++L     Y +GAY                   
Sbjct: 8   LLNGLQFGAMLFLLAAGLTLIFGIMGVVNLTHGSFYMVGAYCAAYAIGST---------- 57

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            + ++G    ++G        + + I  L   +    +L  +  +      + +      
Sbjct: 58  GSFLAGVLAALLGAGLYGLSVEVVVIRKLYKRDHLYQVLATFGLLLFSNEAVSLIFGRRP 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + S +      +    Y +     +     ++  +   + RT I    R   D+++
Sbjct: 118 PLVGIPSFLEGAVTLAPGFQYPLIRLSFIAVGALVAVGLWWLVNRTRIGMLIRAGADDRE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       F + +   G+AG   A                I    ++++GG+
Sbjct: 178 MVDALGIDIKKLYTLVFGLGALLCGLAGVMAAPLLAV--EIGMGERILITTFVVIVIGGV 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL---MVIALFLVILMR 335
            S+        ++  V  +          ++     +  +        + + + +V++ +
Sbjct: 236 GSVRGALAGALLVGMVDSMGRAFLPQLLGAVFSPATADPLAAGLASASIYVLMAIVLIAK 295

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 296 PGGLFPAR 303


>gi|120556769|ref|YP_961120.1| inner-membrane translocator [Marinobacter aquaeolei VT8]
 gi|120326618|gb|ABM20933.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Marinobacter aquaeolei VT8]
          Length = 399

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 46/329 (13%), Positives = 90/329 (27%), Gaps = 36/329 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL----------- 84
             +  +M  + L Y   A GL +  G  G+LSL   + + +G Y   +            
Sbjct: 34  DPFRLNMVGKYLTYAFVAIGLVMCWGKAGILSLGQGVFFGLGGYCMAMFLKLEASTPEAT 93

Query: 85  -GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
                      +                  S            L     F     +   +
Sbjct: 94  AIQSTPGIPDFMDWNQLTELPWFWEPFHSFSFTLLAIVGVPVLLAFIIGFAMFTRRVGGV 153

Query: 144 TNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLLGMCFL 193
                   +A  L  L    +                 +       +  +Y+V +G+ F+
Sbjct: 154 YFAIITQAIAAILTILIIGQQGYTGGVNGITDLQTLMGWDIRTDEAKTILYFVCVGLLFV 213

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              +  +++   +      +   +         +   K+  F +++AF G+ GA F    
Sbjct: 214 CLFVARFVQNRKLGRILVAMNAQENRVRFSGYDVAAFKIFVFCLAAAFAGIGGALFTLIV 273

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             +SP       +I ++    LGG  S+        ++                +   F 
Sbjct: 274 GFMSPSFIGIVASIEMVIFCALGGRLSILGAVYGALLV--------------NAAKSGFS 319

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            SF       M      V+L   + L  L
Sbjct: 320 ESFPELWPFAMGALFIGVVLAFPNGLAGL 348


>gi|330807907|ref|YP_004352369.1| high-affinity branched amino acid ABC transporter permease
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327376015|gb|AEA67365.1| Putative high-affinity branched amino acid ABC transporter,
           permease component [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 307

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/290 (12%), Positives = 86/290 (29%), Gaps = 2/290 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I  +   +     +P+
Sbjct: 11  LVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIAIAGLSMMGLDSVPL 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
               +    +++                   + +   I  I           +    +  
Sbjct: 71  LMTAAFIASIVVTSSYGYSIERIAYRPLRGSNRLIPLISAIGMSIFLQNTVLLSQDSKDK 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   +          +  V+       V +        + L++ R+ +  A R   ++ 
Sbjct: 131 SIPNLIPGNFAIGPGGAHEVLISYMQIVVFVVTLVAMLGLTLFISRSRLGRACRACAEDI 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +A    +     I+P+   F   +   +  +LGG
Sbjct: 191 KMANLLGINTNNIIALTFVIGAALAAIAAVLLSMQYGVINPNA-GFLVGLKAFTAAVLGG 249

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           + S+        +L         +    +  ++ F     +       I 
Sbjct: 250 IGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299


>gi|262276905|ref|ZP_06054698.1| inner-membrane translocator [alpha proteobacterium HIMB114]
 gi|262224008|gb|EEY74467.1| inner-membrane translocator [alpha proteobacterium HIMB114]
          Length = 354

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 46/335 (13%), Positives = 105/335 (31%), Gaps = 26/335 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +   LLLFL +       +   +   +LI ++ A   +I  G +G  S   ++ + +G
Sbjct: 9   LYICGALLLFLLVAPFVFVNFKLQLA-FMLILIILAMTWNIQGGEMGYNSFGNIMFFGVG 67

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y    +       +          +           L     + A+   I++ +    +
Sbjct: 68  MYLCASMQIGLYFPLAEWTESGGEKTFVHEPDQYFKGLALGLAFAAMIPPIIAGLIGYGI 127

Query: 138 IKWKPIT--------NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +  +              +G               +   F +          F+Y++ L 
Sbjct: 128 LGLRGHYFAICTLGIGIASGELAGGIELIGAGQGMTAPPFPKGLGDLETRGEFLYFLCLI 187

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF- 248
           +   + + I WL  T        IRDN+    ++    +  K++ + +S+ F G+AG   
Sbjct: 188 LLVATFTFIRWLYTTRFRLVLNAIRDNEDKAEAMGIETMRYKITGWMISAFFCGLAGGLV 247

Query: 249 --FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                  + +          + ++ + ILGG  +L       +      E          
Sbjct: 248 GTMVGYIEPVEVAFDGREMGVFMVLMTILGGKGTLWGPIIGASAFHIFKE---------- 297

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                F   F       + + + ++++     L+ 
Sbjct: 298 ----SFWTLFLGWQYVALGVLIIVIVIYFPEGLMG 328


>gi|192293245|ref|YP_001993850.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|192286994|gb|ACF03375.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 355

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 47/338 (13%), Positives = 112/338 (33%), Gaps = 14/338 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L ++  +++              ++  +I I+        +++G  G +S    + Y
Sbjct: 13  VLSLLLITIVVVLAITPFVFPGAKPLNVAAKICIFAALVASYDLLLGYTGTVSFAHTMFY 72

Query: 75  AIGAYSYVILGSRYGLSIW---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
            IG+Y+  I     G S       + +   ++    +++GL SL+    + A+ TL ++ 
Sbjct: 73  GIGSYAVAIALYSMGPSWAAVGAGVLIGLPLAALLALVIGLFSLRVEAIFFAMITLAVAS 132

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            F  +  +   +T G+ G   +             +    F    +   I  YY++L  C
Sbjct: 133 AFLVLASQLSWLTGGEDGRSFSLP----ELLRPGTVFVKDFFGVRINGRILTYYIILVGC 188

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                 +L +  +      + +R+N+    +L    +F    A  +++     AG   A 
Sbjct: 189 AGMILALLRVVNSPFGRVLQAVRENRFRAEALGYRTVFHLTYANVLAALVAAAAGVLNAM 248

Query: 252 SRDRI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                       FS  + ++ +V++GGM ++        I I        +      +  
Sbjct: 249 WLRYAGPDTSLSFSIMLDILLMVVIGGMGTIYGAIIGATIFILAQNYLQALMGAASGAAA 308

Query: 311 KFDCSFNMR------HTTLMVIALFLVILMRSHSLLRL 342
                              + +     +      ++  
Sbjct: 309 DAGLPLLPNLLHPDRWLLWLGLLFVASVYFFPTGIVGR 346


>gi|209520093|ref|ZP_03268868.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209499466|gb|EDZ99546.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 308

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 58/284 (20%), Positives = 114/284 (40%), Gaps = 21/284 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +   L++           YI  +      + +FA    ++ G  G ++        +GAY
Sbjct: 12  IAVALVVMAATLPWWLSGYILGVLTVAYYFGVFAMSWDLLFGFAGEVNFGPTFLIGLGAY 71

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           S  IL +R+GL I + +     ++   G+++ +P+L+ RG Y  + TL+   + QN ++ 
Sbjct: 72  SAAILDARWGLPIPVCVIAGGGVALVGGLLLAVPALRLRGPYFGLVTLVAVLLLQNAIVI 131

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           +  +T G+ G+ V D +                           Y++ L    + A ++ 
Sbjct: 132 FAGVTGGEIGMMVPDVMSVDANH--------------------NYWIALAFLIVCAILLF 171

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS-P 258
            L R+A+    +    +     +L   +   KL AF +S+ F G+AGA     +   S  
Sbjct: 172 GLSRSAVGLILQASGQDATGAQALGFNVTRHKLVAFCISAVFSGVAGAMLVFYQGTASVS 231

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
            +   S  + +I   +LGG  ++      +  LI   E    + 
Sbjct: 232 TVVDLSVGVQIIIAAVLGGRRTILGAVLGSIFLIVAGEFLRPLG 275


>gi|241666642|ref|YP_002984726.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240862099|gb|ACS59764.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 329

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 59/310 (19%), Positives = 122/310 (39%), Gaps = 29/310 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS      +   AY        +GL   L I +   
Sbjct: 42  FLMKLLCFALFACAFNLLLGYTGLLSFGHATFFGGAAYFTAYTVKAWGLPPELGILIGVA 101

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G++MG  +++ +G Y A+ TL +S++F    ++ +                    
Sbjct: 102 GAAFLGLVMGFFAIRRQGIYFAMITLALSQMFFFFCLQAEFTEG--------------ED 147

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++S+ R   F    +     MYY +L +  +   II     +      ++IR+N++   
Sbjct: 148 GIQSVPRGHLFGFIDLNSSTNMYYFVLAVFIIGVLIIWRFINSPFGMILKSIRENEQRAI 207

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL  ++   KL AF +S+A  G+AGA  +      +     +  +  VI + +LGG+ +L
Sbjct: 208 SLGYSVARYKLGAFVMSAALAGLAGAVKSIVFQFATLTDVAWQMSGEVILMTLLGGIGTL 267

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +++ +        F                 T +  I   + +L+    ++ 
Sbjct: 268 IGPLFGAGLVVALENYLATSEFPV---------------TIITGIVFMVCVLIFRRGIIG 312

Query: 342 LRTPSNFLER 351
               S    +
Sbjct: 313 EFYASRLGRK 322


>gi|158929984|gb|ABW82965.1| ABC transporter [uncultured bacterium pEAF66]
          Length = 309

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 103/314 (32%), Gaps = 26/314 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS---------YVILGSRYG 89
           I +  +   +Y + A G ++V G L L++        IGA            V      G
Sbjct: 8   IINGLVIGSMYALIALGYTMVYGVLNLINFAHGDVLMIGAMVGLSILKFLQVVSPEMHGG 67

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L + L I  +  +     +I+   + +   +   +A LI +     +L+ +     G   
Sbjct: 68  LMLALAILGAIPVCMIVNVIIERVAYRRLRNAPRLAPLITAIGVSYLLVTFAMWYWG--- 124

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                       +   L+          +       +L         ++L + +T +  A
Sbjct: 125 --------RAPLSFPQLLSSEPISIGGAVISQTQVLLLALALLSMGGLVLLVEKTKMGRA 176

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R   +N +    +        ++ FA+ +A   +AG  + A+   I   M  F   +  
Sbjct: 177 MRATAENPRVAGLMGVDSNKVIVATFAIGAALAAVAGVMWGANYSSIQFAM-GFLPGLKA 235

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
               +LGG+ ++        +L  +  L  G         L      +        + L 
Sbjct: 236 FCAAVLGGIGNIYGAMIGGILLGLIEALGAGYIGDLTGGFLG-----SHYQDIFAFVVLI 290

Query: 330 LVILMRSHSLLRLR 343
           +V+ +R   ++  R
Sbjct: 291 IVLTVRPSGIMGER 304


>gi|290510013|ref|ZP_06549383.1| branched-chain amino acid transport system permease [Klebsiella sp.
           1_1_55]
 gi|289776729|gb|EFD84727.1| branched-chain amino acid transport system permease [Klebsiella sp.
           1_1_55]
          Length = 299

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 52/291 (17%), Positives = 101/291 (34%), Gaps = 11/291 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++        +GA+S + L S  GL   + + +
Sbjct: 10  VVNGMSLGGMYALIAIGYTMVYGVLRLINFAHADVMMVGAFSTLFLFSSVGLPFGVAVFL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  + G  GM++   + +       I+ LI +      L     +  G +  + +   +F
Sbjct: 70  TLGLCGLFGMLIDRVAYRPLRQASKISMLITAIGVSFFLENLFNVMFGGSSRFFSAPDFF 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T               VI     + V L    L  +I+  L RT    A R +  +  
Sbjct: 130 NQTR----------AFGSVIITNVAWIVPLITVLLLLAILWLLYRTRYGMAIRAVAFDVN 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           FA+ S+   + G F++ S   I P M      +   +  +LGG+
Sbjct: 180 TVRLMGIDANRIISLVFALGSSLAALGGVFYSISYPTIDPLM-GVLIGLKAFAAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            S++       IL     +   +          F   F +       + + 
Sbjct: 239 GSVTGAVLGGFILGFTEVVAVAIFPELGGYKDAFAFLFLILVLLFRPVGIM 289


>gi|253686513|ref|YP_003015703.1| inner-membrane translocator [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753091|gb|ACT11167.1| inner-membrane translocator [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 308

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 87/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +       +
Sbjct: 12  MFNGLTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDAGWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
               +    +++                     +   I  I           +    R  
Sbjct: 72  LIGAAFIAAVVISSAYGWSIERVAYRPVRTSKRLIALISAIGMSIFLQNYVSLNQGSRDV 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + V                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLVTGQWVLGESNGFAATISSMQLIIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L  +        F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGISTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     L        +   + F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLILGVAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|241765732|ref|ZP_04763678.1| urea ABC transporter, permease protein UrtC [Acidovorax delafieldii
           2AN]
 gi|241364392|gb|EER59515.1| urea ABC transporter, permease protein UrtC [Acidovorax delafieldii
           2AN]
          Length = 404

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 102/334 (30%), Gaps = 36/334 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             +  ++  + L Y   A GL +V G  G+LSL   + + +G Y+  +            
Sbjct: 32  DIFRLNLVGKYLTYAFVAIGLVMVWGYGGVLSLGQGVFFGLGGYAMAMFLKLEASDPIST 91

Query: 96  IPVSAMISGACGMIMGL-----PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              S            +       + F+     +A +I+       +I +        G+
Sbjct: 92  KIQSTPGIPDFMDWNQITELPAFWVPFKSLPFTLAAVIVVPTLLAWVISFAMFKRRVGGV 151

Query: 151 YVA-----------------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           Y A                          +  L   + + +     +  +YYV + +   
Sbjct: 152 YFAIITQAVALICTVLIIGQQGYTGGVNGMTDLKTLWGWDTRTDSAKYILYYVCVALLIG 211

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           S  +  W++   +      +RD +         +   K+  F +++A  G+ GA F+   
Sbjct: 212 SIVLCRWVQTGKVGTLLLAMRDKEDRVRFSGYDVANFKVFTFCLAAALSGIGGALFSLQV 271

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             +SP       +I ++    +GG  SL      T ++     L              F 
Sbjct: 272 GFMSPSFVGIVPSIEMVIYAAVGGRMSLVGAVYGTLLVNAGKTL--------------FS 317

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
            SF      LM      V +     L  L     
Sbjct: 318 ESFPEMWLFLMAGLFIGVTMAFPMGLAGLWESHI 351


>gi|119872104|ref|YP_930111.1| inner-membrane translocator [Pyrobaculum islandicum DSM 4184]
 gi|119673512|gb|ABL87768.1| inner-membrane translocator [Pyrobaculum islandicum DSM 4184]
          Length = 363

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 102/332 (30%), Gaps = 34/332 (10%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY-------------VILGSRYG 89
            +   IY ++   L++ VG LGL     V+  A+G  +                + S+ G
Sbjct: 18  AVLFAIYGIYVLSLNLEVGYLGLPQFGKVMFLALGGLTVGGITTKIALEIYKATIASQLG 77

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +     I           + +          Y  +  L+   +   +   +  +  G A 
Sbjct: 78  IDPLADIDRYCSAYQYQTVTIINNIFSMSPLYGTLFFLLSITLAALLAGVFGVLMAGPAL 137

Query: 150 IYVADRLYFLGTT------------------VRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
               D L  L                     V   +    F             +     
Sbjct: 138 RLREDYLGILLLVSAETIRVITTYTPPIACGVFGAVVPDPFAWMGSYRPWGYLAITALFL 197

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+  I+  L  +    A R IRD + A       I+  ++   A +SA  G+AGA    
Sbjct: 198 LLTLVILERLGNSPFGRALRAIRDAEVAARVFGKDIVKFRVRVLATASALSGVAGALLVF 257

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
             + ++   F      I  +++I+GG  +        A+   +      ++ Y  +    
Sbjct: 258 YNNFVNMGQFVPLYTFIAWAMLIIGGTGNNIGALIGVAVYYALE---RIISIYKESIRSI 314

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            +         +  IA+ LV++ R   +   +
Sbjct: 315 VNVDPIFFQYIIFGIAIILVLMFRPQGIFGEK 346


>gi|56696809|ref|YP_167171.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56678546|gb|AAV95212.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 336

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/334 (10%), Positives = 87/334 (26%), Gaps = 19/334 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L      S   +           + A G++++ G L   +       A GA   V++  
Sbjct: 3   ILNALVALSNFVLIPAIAYGSQLALGALGVTLIYGILRFSNFAHGDTMAFGAMITVLVTW 62

Query: 87  RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
                           L +P   +   A  ++      +F  +  A   +++      + 
Sbjct: 63  WMQSHGISLGPLPTALLALPFGILGCMALVLVTDRAVYRFYREQKAKPVILVIVSMGVMF 122

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I    +                        +        +  +      ++      A +
Sbjct: 123 IMNGLVRFVIGPNDQNFADGTRFLISARDFKKMTGLDEGLAIKTTQALTVVVAVICVALL 182

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L RT    + R   DN+              +  + + +A    AG  +   +    
Sbjct: 183 FWFLNRTRTGKSMRAYSDNEDLALLSGINPERVVMYTWLIVAALATTAGVLYGLDKSF-- 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309
                F   + + +  I+GG+ S         ++             +   +     +  
Sbjct: 241 KPFVYFQLLLPIFASAIVGGLGSPLGAIAGGFVIAFSEVTVTYAWKKVLGYLAPEGMSPD 300

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                        +  + L +V+L +   L + +
Sbjct: 301 GLVQLLSTDYKFAVSFVILLIVLLFKPTGLFKGK 334


>gi|33603267|ref|NP_890827.1| branched-chain amino acid transport system permease [Bordetella
           bronchiseptica RB50]
 gi|33577391|emb|CAE34656.1| branched-chain amino acid transport system permease [Bordetella
           bronchiseptica RB50]
          Length = 320

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 68/301 (22%), Positives = 116/301 (38%), Gaps = 29/301 (9%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y+ ++ +   IY + A GLS++VG  G +SL       IGAY+  I   R+ +  W
Sbjct: 19  TGNAYLINLFVVCAIYALPAIGLSLLVGHCGQISLGHAAFVGIGAYAAAIASQRWDMDPW 78

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L +  +A ++ A    +G    + RG +LA+ATL +  I   +L++W  +T G  GI VA
Sbjct: 79  LAVLFAAALACAAAWAVGKLVFRLRGHHLAMATLALGMIVHTVLVEWHDVTGGPDGISVA 138

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             L      + S                  + +      ++  +   L R+    A R +
Sbjct: 139 GVLKVGSLELASDP--------------AFFVLGWLAVIVALILADNLIRSPFGLALRVV 184

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +++    S+       K      S A  G++G  +      ISPD F  + +I ++ IV
Sbjct: 185 GESELVAGSIGIAPARVKQLIMMASGALAGLSGGLYTFWMGYISPDPFNVALSIKLLLIV 244

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
            L G T   +       ++ V E                          L  + L L +L
Sbjct: 245 ALSGFTGTWRTLVGVFFVVLVSEGMKSF---------------GHLDVILYGLLLILTML 289

Query: 334 M 334
            
Sbjct: 290 F 290


>gi|316932908|ref|YP_004107890.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315600622|gb|ADU43157.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 305

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 104/312 (33%), Gaps = 28/312 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGL 90
           + +  +   IY + A G ++V G +G+++      + IG +  +I          +   L
Sbjct: 8   LINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLILVSFGLTFVPL 67

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + +++ VS  I+   G  +   + +       +A ++ +     +L+ +  ++ G    
Sbjct: 68  ILLVVLLVSMAITALYGWTVERIAYRPLRHSFRLAPMLSAIGMSFVLMNFAQVSQGARVK 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            V   +    T   S   F    S+  I  +    VLL      A     + +T +    
Sbjct: 128 PVPPIITGGYTLHESADGFVVRLSNVQILVVVSTIVLL------AIFTWLVAKTRLGRDM 181

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    +Q     L   +       F + +A   +AG  +      +   M  F   I   
Sbjct: 182 RACEQDQTMAALLGVNVDRTISMTFVIGAALASVAGMMYLLYYGLVDFFM-GFVAGIKAF 240

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ SL        ++  +           +  +  F               L +
Sbjct: 241 TAAVLGGIGSLPGAMLGGLLIGLIETFWSAYFSVEYKDVAAFS-------------ILIV 287

Query: 331 VILMRSHSLLRL 342
           V++     LL  
Sbjct: 288 VLIFMPTGLLGR 299


>gi|302551568|ref|ZP_07303910.1| D-ribose ABC transporter permease [Streptomyces viridochromogenes
           DSM 40736]
 gi|302469186|gb|EFL32279.1| D-ribose ABC transporter permease [Streptomyces viridochromogenes
           DSM 40736]
          Length = 650

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 52/325 (16%), Positives = 106/325 (32%), Gaps = 39/325 (12%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +V  + + +  G   +   + ++G+Q  +  + A+G++ V+ S G + L+     
Sbjct: 28  ALTALIVLVVAMSVLSGDFLTTDNLLNVGVQAAVTAVLAFGVTFVIVSAG-IDLSVGSVA 86

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A       +  G+ ++  + ++     ACG+I G+     +         ++     
Sbjct: 87  ALSATVLAWSATSAGVPVFAAVLLAIATGVACGLINGILISYGKLPPFIATLAML----- 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                            VA  L  + +    +               ++   +L M  + 
Sbjct: 142 ----------------SVARGLSLVISEGSPIALPGSVSHLGDTLGGWLPVPVLVMIVMG 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT I  +   I  N++A       +   KL+ +A S  F  +AG   AA   
Sbjct: 186 LIAAFVLGRTYIGRSMYAIGGNEEAARLSGLRVKRQKLAIYAFSGVFAAVAGVVLAARLS 245

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG    S       IL  +      +N   F   
Sbjct: 246 SAQPQAADGYELDAIAAVVIGGASLAGGTGKASGTLIGALILAVLRNGLNLLNVSAF--- 302

Query: 310 LKFDCSFNMRHTTLMVIALFLVILM 334
                        ++ + + L +L 
Sbjct: 303 ---------WQQVVIGVVIALAVLF 318


>gi|239834017|ref|ZP_04682345.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301]
 gi|239822080|gb|EEQ93649.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301]
          Length = 328

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 56/343 (16%), Positives = 124/343 (36%), Gaps = 28/343 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+  +  LN+          +  ++L   +G       + ++  +I+   +    L +V 
Sbjct: 1   MTDVTQSLNQRRHSRAGFLGITAIILASVIGWFLFPDNL-ALLTRIIAIALLVLSLDLVT 59

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           G  G+ +L     +  GAY   I  + +      L+  +  +     G++ G   L+  G
Sbjct: 60  GYCGIATLGHAALFGAGAYGAGIAAAHFGITDPLLMTLIGLIAGAITGLVSGAVILRAHG 119

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
               + ++ +  +F     K    T G  G+        LG               F +Y
Sbjct: 120 LAQLVLSIAVIHLFHEAANKASSWTGGSDGLSGIAPDPILGI------------FEFDLY 167

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              +Y   + +  +S   + ++ R+      R ++++     ++  ++   +L  + +S 
Sbjct: 168 GHTVYIYAVVLLLISFIFLRFVVRSPFGMLCRGVKEDPIRIHAMGASVQSVQLRMYVISG 227

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  G+ GA  A S   +  D   F+ +   + +++LGG  SL      T + +   +L  
Sbjct: 228 AVAGVGGALNAISTQVVGLDSLSFTLSAEALVMLVLGGTGSLFGGLIGTVVFMWFEDLVS 287

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             N +++               T++   L  V+L     L   
Sbjct: 288 AANPFHW--------------LTMVGALLIAVVLFAPRGLYGT 316


>gi|293603115|ref|ZP_06685549.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292818509|gb|EFF77556.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 304

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 99/308 (32%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +  M A GL+++ G +G+++L     Y +GAY                   
Sbjct: 8   LLNGLQFGAMLFMLAAGLTLIFGIMGVVNLTHGSFYMVGAYCAAYAIG----------TT 57

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            + ++G    ++G        + L I  L   +    +L  +  +      + +      
Sbjct: 58  GSFLAGVLAALLGAGLYGISVEVLVIRKLYKRDHLYQVLATFGLLLFSNEAVSLIFGRRP 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + S +      +    Y +     +     ++  +   + RT I    R   D+++
Sbjct: 118 PLVGIPSFLEGAVTLAPGFQYPVIRLSFIAIGALVAVGLWWLVNRTRIGMLIRAGADDRE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       F + +   G+AG   A                I    ++++GG+
Sbjct: 178 MVDALGVDIRKLYTLVFGLGALLCGLAGVMAAPLLAV--EIGMGERILITTFVVIVIGGV 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL---MVIALFLVILMR 335
            S+        ++  V  L         +++     +  +        + + + +V++ R
Sbjct: 236 GSVRGALAGALLVGMVDSLGRAFLPQLLSTMFSPATADPLAAGMASASIYVLMAIVLIAR 295

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 296 PGGLFPAR 303


>gi|144901326|emb|CAM78190.1| Membrane spanning protein [Magnetospirillum gryphiswaldense MSR-1]
          Length = 306

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 100/308 (32%), Gaps = 15/308 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     +   + A GL++V G + ++ L+    Y +GAY    LG+R+   +  L    
Sbjct: 11  LNGLQLGITLFLMAAGLTLVFGIMDVIHLSHGSFYMLGAYLTATLGARFDSYLLGLALAI 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++    ++  +   +          L    +        + I   +            
Sbjct: 71  PLVALIGMVVEWIAIRRLYERDHLDQVLATFGLIMFFNEAVRMIWGAQPIFLSPPASLAG 130

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +             + Y  F   +L     ++A + L +RRT +    R    ++  
Sbjct: 131 TVELLP----------GLFYPQFRLAILGTGLAVAALLGLMIRRTRLGMRLRAGASDRAM 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   I       F + +    +AG                 S  I+   +V++GG+ 
Sbjct: 181 AGALGVNIDGLFTIVFGLGTGLAALAGGMAGTVLSV--QVGMGESILILTFVVVVIGGIG 238

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMRS 336
           S+        ++  V  L   M      S L    + ++  +     + + + LV+  R 
Sbjct: 239 SIKGALVGAILVGLVDTLARTMLPVALRSTLPASQADSVAASLSSTSVYVLMILVLAWRP 298

Query: 337 HSLLRLRT 344
             L   RT
Sbjct: 299 KGLYGART 306


>gi|114567621|ref|YP_754775.1| branched-chain amino acid ABC transporter permease [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
 gi|114338556|gb|ABI69404.1| branched-chain amino acid ABC transporter, permease protein
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
          Length = 291

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 101/306 (33%), Gaps = 26/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G + L++      Y  GA++ +IL S +G ++   + V
Sbjct: 6   LLNGLTLGSTYALIALGYTMVYGIVQLINFAHGEIYMFGAFAGLILVSFFGFNLIAAMLV 65

Query: 99  SAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           + +     G+++   +    RG    ++ LI +      L     +  G       + + 
Sbjct: 66  AMLFCMLLGILVERIAYRPLRGKSSRLSALISAIGVSIFLSTLMALMAGTNTHRYPEVIA 125

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                              +   +    +L     L   +   +++T I  A R    + 
Sbjct: 126 HQTYH-----------LGSLDLSLMQILILAVSALLMIGLQFMVQKTRIGKAMRACSQDL 174

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A + +   +       FAV SA     G       + + P M      +   +  ++GG
Sbjct: 175 DASYLMGINVNRVISFTFAVGSALAAAGGVMVGVYYNAVWPYM-GMMAGLKAFAAAVMGG 233

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+         L  +  +        +   + F               L LV+L+R  
Sbjct: 234 IGSIPGAMIGGLSLGIMEIMGVAYLSSSYKDAIAFG-------------MLILVLLIRPQ 280

Query: 338 SLLRLR 343
            L+  +
Sbjct: 281 GLMGQK 286


>gi|257453186|ref|ZP_05618485.1| branched chain amino acid ABC transporter permease [Fusobacterium
           sp. 3_1_5R]
 gi|317059720|ref|ZP_07924205.1| branched-chain amino acid transport system permease livH
           [Fusobacterium sp. 3_1_5R]
 gi|313685396|gb|EFS22231.1| branched-chain amino acid transport system permease livH
           [Fusobacterium sp. 3_1_5R]
          Length = 294

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 95/306 (31%), Gaps = 28/306 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLL 95
           I +      IY + + G ++V G   L++        +GAY+ +     +      IW  
Sbjct: 7   IINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMVGAYTSLFSIPIFQKMGLPIWAT 66

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           I  + +I    GM+    + +   +   I+ LI +      L                  
Sbjct: 67  IFPAMIICALLGMLTEKIAYRPLRNSPRISNLITAIGVSLFLENIFMKLFTPN------- 119

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                     +          + +       +L    LS ++ L+++ T    A     +
Sbjct: 120 ----TRAFPKVFSQVSIHLFGISFNYGSVITILLTLALSIALHLFMKNTKYGKAMLATSE 175

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +  A   +   + F     FA+ SA   +A   + ++  ++ P M      I      +L
Sbjct: 176 DYGAATLVGINVNFTIQLTFAIGSALAAIASVLYVSAYPQVQPLM-GSMLGIKAFIAAVL 234

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  L        IL  +  L              F               L +V+L++
Sbjct: 235 GGIGILPGAVIGGFILGIIESLTRAYLSSQLADAFVFG-------------ILIIVLLIK 281

Query: 336 SHSLLR 341
              +L 
Sbjct: 282 PTGILG 287


>gi|242238063|ref|YP_002986244.1| inner-membrane translocator [Dickeya dadantii Ech703]
 gi|242130120|gb|ACS84422.1| inner-membrane translocator [Dickeya dadantii Ech703]
          Length = 300

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 58/303 (19%), Positives = 101/303 (33%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++        +GAY  +   + +GL     +  
Sbjct: 11  VVNGMSLGSMYALIAIGYTMVYGVLRLINFAHADIMMVGAYMALFSVTSFGLPFGAAVIF 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +I+   G+ +   + +       I+ LI +      L     +  G +  Y     +F
Sbjct: 71  SVLIAALLGICIDQIAYRPLRQASKISMLITAIGVSFFLENLFNVVFGGSPRYFESPPFF 130

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T               +I     + V L    L A I+  L RT    A R +  +  
Sbjct: 131 NQT----------LNFGSIILTNVAWIVPLLTLVLLAIILFILYRTRHGMAIRAVAFDVN 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           FA+ S    + G F+A S   I P M      +   +  +LGG+
Sbjct: 181 TVRLMGIDANHIIAFVFALGSGLAALGGVFYAISYPSIDPLM-GVLIGLKAFAAAVLGGI 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+S       IL     +   +          F   F           L LV+L R   
Sbjct: 240 GSVSGAVIGGFILGFTEVVAVAVFPELGGYKDAFAFMF-----------LILVLLFRPVG 288

Query: 339 LLR 341
           ++ 
Sbjct: 289 IMG 291


>gi|163735728|ref|ZP_02143158.1| inner-membrane translocator [Roseobacter litoralis Och 149]
 gi|161390981|gb|EDQ15320.1| inner-membrane translocator [Roseobacter litoralis Och 149]
          Length = 404

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 67/383 (17%), Positives = 140/383 (36%), Gaps = 65/383 (16%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +    +  + ++    LF  + +  +  Y+  + I    Y + A   S++ G  G  S  
Sbjct: 8   RQVPNIAGVLLLGFFALFPLVYSGGNYDYVMHVLITAFFYAILASSWSMLAGYAGQFSFG 67

Query: 70  CVIAYAIGAYSYVILGSRYG---------------------------------------- 89
            +    IGAY   +    +                                         
Sbjct: 68  HMAFMGIGAYGTALFCHYFYITSEPTGICTEFAFFGNYFVIKNAIGVTSTTLDQDCLAQA 127

Query: 90  ------------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
                       + + + I +  M  G  G+++GL  L+ R  YLA+ TL  SEI + ++
Sbjct: 128 VAVWGDSVSVRPMPVLMGIILGTMAGGLSGLLVGLLVLRLRAAYLALFTLGFSEIVKAVI 187

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                IT G+AG+ +        + + +              +I  YY++LG+  L  ++
Sbjct: 188 SAEIDITRGQAGLELPALFENGVSLMGTTFDKTD--------KIPPYYIMLGLLVLCLAL 239

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           + WL R+      R +R++Q A  +L       K+  F +++A    AGA  A     ++
Sbjct: 240 LAWLARSRFGLFVRALREDQDAAAALGVNTTRYKVYVFTITTAMAAAAGAVQAHYVQIVT 299

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P++    +  +V+++ ++GG+ +    A     L  ++EL          ++   +    
Sbjct: 300 PNLMFLLQMSLVVAMAVIGGVENFVAAALGAIFLQILLELLRTSF-----TIGGVEVDMT 354

Query: 318 MRHTTLMVIALFLVILMRSHSLL 340
           +       I L + +    + L+
Sbjct: 355 VWRLVFFGILLMITLRFFRNGLI 377


>gi|187922168|ref|YP_001893810.1| branched-chain amino acid ABC transporter inner membrane protein
           [Burkholderia phytofirmans PsJN]
 gi|187713362|gb|ACD14586.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
          Length = 360

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 108/324 (33%), Gaps = 26/324 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +    +  + L    +  ++ +M    L+  + A    ++ G  G+L+L       +G
Sbjct: 26  LLMWIAAVAAVVLVPLVASPWLLAMVRDALVMGILALSYDLLWGRAGVLTLGHTTFLGLG 85

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGAC--GMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           AY + ++  ++G +    + V  + +      +   L     R  + AI +L +  + Q 
Sbjct: 86  AYGFAVMTVQFGQAPLTGVAVGVLCAAGVAAVIGYFLLFAGVRLHFFAIISLAVLIVAQQ 145

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + W+ +T G  GI     L F                  +      +Y +  +   + 
Sbjct: 146 LAVSWQSVTGGDTGILGIPGLSFSVDGYA----------FDLSGPRTSWYTVAAILLAAT 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +I  + R+        I  N+    +         L  F  S+A   +AG   AA    
Sbjct: 196 GLIWLVCRSHYGKVLNAIATNEWRAKACGYHTPLHLLLVFVASAALAAVAGVLMAACSGV 255

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++PD+F       VI  V +GG         A   L  + +     +   +         
Sbjct: 256 VAPDVFSPLLATEVILWVAIGGRGRTGGPVVAAVALTLLRQAVSSYSTDGWP-------- 307

Query: 316 FNMRHTTLMVIALFLVILMRSHSL 339
                  ++       +L   + L
Sbjct: 308 ------LMLGGLFLACVLFMPNGL 325


>gi|326331057|ref|ZP_08197355.1| branched-chain amino acid ABC transporter, permease protein
           [Nocardioidaceae bacterium Broad-1]
 gi|325951098|gb|EGD43140.1| branched-chain amino acid ABC transporter, permease protein
           [Nocardioidaceae bacterium Broad-1]
          Length = 290

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 52/311 (16%), Positives = 110/311 (35%), Gaps = 26/311 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y          Y + A GL+++ G LG+++      Y +GA +  +L    G+S+WL +
Sbjct: 6   QYTVQGLAAGSFYALAALGLAVIFGVLGVVNFAHGAFYMLGAVAAAVLLDTVGMSLWLAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V  ++    GM++    +++      +  L+++     +L+       G +G+      
Sbjct: 66  IVVPLLMLVFGMLVERLLVQWLLPLDPLYNLLLTFGLTLLLVDLVKRRYGVSGLPYERPS 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G          R     V   ++  +V+     +   + L + RT +    R   + 
Sbjct: 126 ALDG----------RVQVGGVGLPVYQLFVIGVALLVCLGVWLLMTRTRVGMIVRAATER 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +   +L   +       F    A  G+AG   A  R   +     F   II+ ++V++G
Sbjct: 176 PELARALGINVGRWVTPVFGFGVALAGLAGVLAAPFRAITAEMGSDFI--IILFAVVVIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        ++  V                            L+ + + +V+L R 
Sbjct: 234 GLGSIVGAVVGGFLVGLVEAFGQAYA--------------PTFAQVLIFVLMAVVVLARP 279

Query: 337 HSLLRLRTPSN 347
             L      + 
Sbjct: 280 AGLFGREEATA 290


>gi|296127508|ref|YP_003634760.1| inner-membrane translocator [Brachyspira murdochii DSM 12563]
 gi|296019324|gb|ADG72561.1| inner-membrane translocator [Brachyspira murdochii DSM 12563]
          Length = 405

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 101/315 (32%), Gaps = 20/315 (6%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            +  +  ++  +   +      +      +          A G++ V+   G + L+   
Sbjct: 38  FLTIVALLILYVFFVIAGRNFFTFDTFSLILRNSYFIGFLAIGVTFVI-ITGGIDLSIGS 96

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
                A    ++ + +   +W ++ +   ++   G I G     F               
Sbjct: 97  LSLFAAMVGGVMITNFQTPMWAVLIIVIAVATLGGFINGFLISYFNLPPFIAT------- 149

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
                +    +T G +GI    +  +  T       +FR   +         +++L +  
Sbjct: 150 -----LGMLMVTKGLSGIVSKSQTIYYPTITDPQYGWFRVLFNATESNFPSGFIMLAIFT 204

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           + + I+L   +T +      +  N++A           K+ A+ ++  F G+ G  FAAS
Sbjct: 205 IISIIVL--TKTIVGRYIFALGSNEEAARLSGIKTNKWKIIAYTIAGFFCGIGGLAFAAS 262

Query: 253 RDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
              ISP   +  E   + ++VI      GG+ S+        I+  +      +    F 
Sbjct: 263 YSSISPGAGQGYEFDAIAAVVIGGTSLSGGVGSIIGTIIGVYIMSVLKVGLPSVGVEQFF 322

Query: 308 SLLKFDCSFNMRHTT 322
                     +    
Sbjct: 323 QYFTIGIVVIIAVLI 337


>gi|145295090|ref|YP_001137911.1| hypothetical protein cgR_1033 [Corynebacterium glutamicum R]
 gi|140845010|dbj|BAF54009.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 362

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 50/317 (15%), Positives = 99/317 (31%), Gaps = 18/317 (5%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                  +  ++  +++ Y + A G+ +  G  G+L+L   + + IGAY   +       
Sbjct: 44  APLFLSTFQLTLMSRLVCYAIVAVGIGLAWGRGGMLTLGQGVFFGIGAYIMAMHMLYSDS 103

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI----FQNILIKWKPITNG 146
            I+           A   +  +  +   G    +    + +         ++        
Sbjct: 104 QIFGTTVPQWWSIFANPAVALIAVVALPGIVAFVLGFSIFKRRIKGAYFAIVNQALAAAV 163

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
              +            +     F  F     I  I  Y+  +G+     +I  WL R+  
Sbjct: 164 VVLLVGQQDSLGGSNGLSGFRSFMGFAVYDPINRIMFYFTAVGVLLALVAISYWLMRSRY 223

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                  RD ++    L       K +A+ +++   G+AGA F      ISP       +
Sbjct: 224 GELLVATRDAEERVRFLGYDPALIKTAAYVIAAMIAGIAGALFVPIVGIISPAEIGVVPS 283

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+ +  V  GG  SL        +L  V                    +F    +     
Sbjct: 284 IVFVIAVAAGGRASLFGPVVGALVLGWVESTL--------------AQTFPSMWSYFQGA 329

Query: 327 ALFLVILMRSHSLLRLR 343
            L LVI++    +  ++
Sbjct: 330 ILVLVIVLLPGGIASIK 346


>gi|188582810|ref|YP_001926255.1| urea ABC transporter permease [Methylobacterium populi BJ001]
 gi|179346308|gb|ACB81720.1| urea ABC transporter, permease protein UrtB [Methylobacterium
           populi BJ001]
          Length = 308

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 95/301 (31%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   +YV+ A GL+I+ G +G++++       +GAY   +  + +   +  L      +
Sbjct: 22  LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTYLCSTFFQTYLPSLFGGYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           + A   +            L     +       +L  W      +           +G  
Sbjct: 82  AMALAFLASGAMGMLVEWAL--IRHLYKRPLDTLLATWGLSLILQQAYRTIFGPREVGVE 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           + S +      +  +  +I   +V+     ++  + + + R+      R +  N+    +
Sbjct: 140 LPSWMMGSIPVTDSIEVQINGLFVIAVTTVITLGVAVLIYRSRFGAQIRAVMSNRSMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +         + F +     G+AG+ F       +         +    IV+ GG  SL 
Sbjct: 200 VGIDTEKVDRTTFGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLIVVFGGAASLL 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++A+  ++++R   L  L
Sbjct: 258 GTIASAFSISQTQSTLEFFLSGSMAK-------------VLTLLAVVAILMLRPQGLFTL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|332284428|ref|YP_004416339.1| high-affinity branched-chain amino acid transport system, permease
           protein [Pusillimonas sp. T7-7]
 gi|330428381|gb|AEC19715.1| high-affinity branched-chain amino acid transport system, permease
           protein [Pusillimonas sp. T7-7]
          Length = 308

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 103/311 (33%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +      IY + A G ++V G +G+++      Y IGAY  ++  S           +
Sbjct: 12  LFNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLSAIGVGSGLPLAV 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            I +++ V+ +++G  G  +   +         +  LI +      L  W  I  G    
Sbjct: 72  VILIMLIVAVLVTGVYGYAIEKVAYAPLRGGPRLVPLISAIGMSIFLQNWVAIGQGA--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   +   +   ++F       V        +++    +  ++ L+++ + +  A 
Sbjct: 129 ----RDMAVPALITGSVQFQMGSDFVVTAPYSRIMIIVVTVLMMIALSLFIKYSRVGRAS 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    + +    L           F + +    + G   A +  +++     F   I   
Sbjct: 185 RACSQDLRMANLLGIDTNRIISFTFIIGAMLAAVGGVLIALAIGKLN-PFIGFIVGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L              +  ++ F               L  
Sbjct: 244 TAAVLGGIGSIPGAMLGGVLLGLAETFAAAYISSQYKDIVAFG-------------LLVF 290

Query: 331 VILMRSHSLLR 341
           ++L R   LL 
Sbjct: 291 ILLFRPTGLLG 301


>gi|307298585|ref|ZP_07578388.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915750|gb|EFN46134.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 312

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 57/304 (18%), Positives = 125/304 (41%), Gaps = 21/304 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+  LL+   L    ++ Y  S+ I IL ++  +    +++   G LS      + +G 
Sbjct: 7   LVIIILLIAAALLPVVTEAYFISVAITILTFMTLSISWDMML-RTGQLSFGTAGFFGLGG 65

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+ +I  + +G+   + I +  +++G   +++G+  L+ RG Y AI T+ ++ +F  ++ 
Sbjct: 66  YTGIIAVADFGVDPLVGIILGGLLAGGVSLLLGMAILRLRGLYFAITTMALASVFMVVIR 125

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +T G +G  V   L+                       + +Y+++LG+   +  + 
Sbjct: 126 NLNKLTGGPSGKIVYTTLFNYD-------------------SVKVYWLMLGITVGTIVVS 166

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
              +RT +  A  +IR ++    S    I    +  F V+S   G+ G+ +A     + P
Sbjct: 167 EVFQRTRVHFAIDSIRADETVAKSHGVNIYKYLIFVFVVTSIIQGVIGSTYALQYGFVYP 226

Query: 259 DMFKFSENIIV-ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           +    +  +++ I++ ++GG+ S         IL    E    +  Y             
Sbjct: 227 ESSFSAHYLLLPIAMALVGGIYSTIGPVLGAIILGLSSEYLKLIMPYGHLIFYGVIIVVV 286

Query: 318 MRHT 321
           +   
Sbjct: 287 VLFL 290


>gi|296272921|ref|YP_003655552.1| inner-membrane translocator [Arcobacter nitrofigilis DSM 7299]
 gi|296097095|gb|ADG93045.1| inner-membrane translocator [Arcobacter nitrofigilis DSM 7299]
          Length = 298

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 101/304 (33%), Gaps = 22/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++        +GA+      + + L   L + +
Sbjct: 10  MVNGFSLGSMYALIAIGYTMVYGVLRLINFAHGDIMMVGAFLAYTFMAVFNLPFPLTVLL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +S A GM+M   + K   +   I+ LI +      L     +  G          Y 
Sbjct: 70  AVTLSAALGMLMDKIAYKPLREAPKISLLITAIGISFFLENAFTVFVGGVPRAFPVPSYM 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        F  + V + +    V L    L   I+  L +T    A R +  + K
Sbjct: 130 EQI----------FTVANVTFSVSSITVPLVTLILLLGILYVLYKTKYGMAIRALSFDIK 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           FA+ SA   + G F+A +   +   M      +   +  ++GG+
Sbjct: 180 TVNLMGIDANMIISLVFALGSALAAVGGIFWAVNYPSVE-PMMGVLVGLKAFAAAVVGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++       I+     +            + F             + L LV+L +   
Sbjct: 239 GSVTGAVLGGFIIGFTEVVV-----------IAFFPEMGGYKDAFAFVFLILVLLFKPTG 287

Query: 339 LLRL 342
           ++  
Sbjct: 288 IMGE 291


>gi|108803048|ref|YP_642985.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
 gi|108764291|gb|ABG03173.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
          Length = 337

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 55/282 (19%), Positives = 109/282 (38%), Gaps = 15/282 (5%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           +   +  +I +  +FA  L +++G  GL+SL     +  GAY+  +LG R   +  L+  
Sbjct: 31  FGVGIATEIYVMAIFAMSLGLIIGYAGLVSLGHAAFFGAGAYTVALLGERVSNTYVLVAA 90

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             A+ +    +   L      G Y  + TL  +++      + + +T G  G+ V+    
Sbjct: 91  AVAVAALLACVSGALFFRS-TGAYFLMLTLAFAQVLFAAAFQAESVTGGSDGMGVSVAP- 148

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                              +  E+ +YY++ G   L   ++     +      R I +N+
Sbjct: 149 -------------DLGFGEISGELGLYYLMGGSFLLCYVLLRLFVSSPAGRVVRGIMENE 195

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +L       KL A+ ++    G AGA ++     ++PD+  +  +   + +VI+GG
Sbjct: 196 LRMRALGYNTFSYKLFAYTLAGGVAGFAGALYSYFNLYVTPDLLGWVFSGQALIMVIVGG 255

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
             +L   A   A  I V         Y+   +      F + 
Sbjct: 256 TGTLLGPAVGAAFFIVVRNYVSFYTEYWALIMGLIFIFFVLL 297


>gi|326330403|ref|ZP_08196711.1| branched-chain amino acid ABC transporter, permease protein
           [Nocardioidaceae bacterium Broad-1]
 gi|325951678|gb|EGD43710.1| branched-chain amino acid ABC transporter, permease protein
           [Nocardioidaceae bacterium Broad-1]
          Length = 300

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/294 (13%), Positives = 98/294 (33%), Gaps = 19/294 (6%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           Y + A G  IV  +  +L+        +G +    L + +G++ +L +P++ +     G 
Sbjct: 20  YALVALGFVIVFKATRVLNFAHASFVLLGGFITWQLAAEWGVNFYLALPLAMVAGALIGT 79

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
            +    L+        + ++M+     +         G                +     
Sbjct: 80  ALQTALLQRLLGERPFSIIMMTIGVLYVFDNVTSAIWGPE-----------DRDLPDPWG 128

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                   V   +   + +        +  L+ R +++    R   D+Q+A  +      
Sbjct: 129 SKTVDLGSVNLAVADLWTIGVTSAAVGAFFLFFRYSSLGLGMRATADDQEAALATGIDAR 188

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
              L+A+A + A   +AGA  ++    + P +   +   +    +I+GG+ S        
Sbjct: 189 RVHLAAWATAGALGTLAGAMLSSGAGSVGPSLG--AVAFVAFPAMIVGGLESPVGAVVGG 246

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            ++  + +L   +   Y   L                  + +++L+R + L   
Sbjct: 247 LLIGLIQQLTALLQPEYAAWLGSGFDRVAP------FAVMVIILLVRPYGLFGE 294


>gi|168699518|ref|ZP_02731795.1| inner-membrane translocator [Gemmata obscuriglobus UQM 2246]
          Length = 316

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 114/323 (35%), Gaps = 18/323 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
                     +Y+    +  L+Y + A G ++V G + L++      + +G++  + +  
Sbjct: 5   LATALGPAFYQYLLIGLVTGLLYALIALGYTMVYGIIELINFAHGDLFMLGSFLALQVAI 64

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G +        A       +++    +   G  + +  ++   +     +       G
Sbjct: 65  WVGAATATGEATGAAALPTILLMLVAAPVFCAGLNVTVDRVVYKPLRNAPKLAPLVSAIG 124

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY----VLLGMCFLSASIILWLR 202
            + I++   ++++GT   +  +     +      I + Y    VL     +  ++ +++R
Sbjct: 125 VSFIFMNIGVFWMGTYDLNFPKLVPQDNLTPGARIALNYKHIMVLAVTLPVMVALTVFVR 184

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            T++  A R    N  A   +   +     + FA+     G+A   +    + +   M  
Sbjct: 185 YTSLGKAMRATAQNPTAAQLMGINVDRVIAATFAIGGGLGGVAAVVYGLYNNTVGY-MMG 243

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F   +   +  +LGG+ ++        I+  V  L        ++               
Sbjct: 244 FQTGLYAFTAAVLGGIGNIPGAVLGGIIIGLVRSLGSAYVGEQWSEA------------- 290

Query: 323 LMVIALFLVILMRSHSLLRLRTP 345
           L+   L ++++ R + +L  RT 
Sbjct: 291 LIFAILIVILIFRPNGILGARTR 313


>gi|238798010|ref|ZP_04641499.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Yersinia mollaretii ATCC 43969]
 gi|238718113|gb|EEQ09940.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Yersinia mollaretii ATCC 43969]
          Length = 308

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 85/305 (27%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y I +Y   I+ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFIVIAALMMIGIDASWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
               +    +++                     +   I  I           +    R  
Sbjct: 72  LIGCAFLVSIVIASAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + V                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLVTGQWTLAETNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     L        +   + F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLILGVAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|311109086|ref|YP_003981939.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310763775|gb|ADP19224.1| inner-membrane translocator 60 [Achromobacter xylosoxidans A8]
          Length = 422

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 57/337 (16%), Positives = 115/337 (34%), Gaps = 29/337 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +   +    + LLA+    L  L               +Q+LI  +FA   +++ G  G+
Sbjct: 1   MSQTRRASTIFLLALCVAALCAL---PWLLPPGQLVAAVQMLIAALFACAFNLLAGQGGM 57

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           LS      + +G ++ +   +  G +  L  P+  +  G  G++ GL +  F      + 
Sbjct: 58  LSFGHAAYFGVGTFATIHAMNALGGAGLLPTPLMPLAGGVAGLLFGLVAGWFATMRAGVY 117

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
             +++     +L    P   G  G                              +I +Y+
Sbjct: 118 FAMITLALAELLHALAPHLKGVFG-----------GEAGVSAMRMPAWGFTFGSDIEVYF 166

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++L    +S + +  L RT +      +R+N      L       K   FA+S+ F G+A
Sbjct: 167 LVLAWVLVSLAALYGLTRTPLGRLTLGLRENANRLRYLGYRPHTLKTLVFALSAMFAGIA 226

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G   A + +  +  +F    +   +    +GG+ +        +IL  + +    +   +
Sbjct: 227 GGLQALNIEAGNYVLFDVKLSTDAVLFAYIGGVNAFLGPVLGASILTFLSQTLADITRSW 286

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                               I   LV+L     L+ L
Sbjct: 287 ---------------LLYQGILFVLVMLFVPDGLVGL 308


>gi|291279454|ref|YP_003496289.1| branched-chain amino acid ABC transporter permease [Deferribacter
           desulfuricans SSM1]
 gi|290754156|dbj|BAI80533.1| branched-chain amino acid ABC transporter, permease [Deferribacter
           desulfuricans SSM1]
          Length = 293

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 95/303 (31%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++      Y IGA+  +I  +    +  +++  
Sbjct: 9   LLNGLTVGSVYALIALGYTMVYGIIKLINFAHGDIYMIGAFLGLIAATVIMKNFVVVLVF 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + M     G+++   + K   +   I+ LI +     I+     + NG            
Sbjct: 69  AMMGCAILGVLVEKVAYKPLRNSSRISALISAIGASIIISNTVVLINGPQ---------- 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L     +    +   +   ++++    L   +   +  T +  A R +  N  
Sbjct: 119 -REAYPKLFPNITYNLGGISISLLQVFIIVISIVLMYGLYYIVHNTKMGIAMRAVSQNLN 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +           FA+ S+    AG         I   M      +      +LGG+
Sbjct: 178 AARLMGINPDKIISFTFALGSSLAAAAGVLVGTYYTAID-PMMGLLFGLKAFVAAVLGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L     L        F   + F               L  +++++   
Sbjct: 237 GSIPGAMFGGIVLGLAEVLGVAFISPSFRDAIAFG-------------ILIFILIVKPTG 283

Query: 339 LLR 341
           L  
Sbjct: 284 LFG 286


>gi|73537495|ref|YP_297862.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72120832|gb|AAZ63018.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 287

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 91/305 (29%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A GL++V G L + +      Y  GAY    L + +G++ WL +  
Sbjct: 8   ILNGLTLGGVYSLVALGLTLVYGILHVPNFAHGAFYMAGAYVSYFLMTSFGVNYWLAMVG 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A++     M+          +   +  +I +      L        G     +      
Sbjct: 68  AAVVVAMLSMLADRLVFHPLRNAPELHDMIAAIGILLFLEAGAQALWGADFHRMPTP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +   +    +++    L   + L+L RT        +  N++
Sbjct: 125 ---------YGQVVDLFGLTAPLQRLLIIVAAFALMVLLHLFLTRTMTGATIMAMAQNRE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        L  FA+S A   +A   +A     +               I+ILGGM
Sbjct: 176 GAALVGIDATRVTLLVFAISGALAAIAATLYAP--INLVYPSMGNLVITKAFVIIILGGM 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+                               +  + L +++ +R   
Sbjct: 234 GSIPGAIAGGLIIGMAESFGGFYVS-------------TDYKDIIAFVLLVVILSIRPQG 280

Query: 339 LLRLR 343
           L   +
Sbjct: 281 LFAGK 285


>gi|256111434|ref|ZP_05452454.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella melitensis bv. 3 str. Ether]
 gi|265992936|ref|ZP_06105493.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether]
 gi|262763806|gb|EEZ09838.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether]
          Length = 328

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 116/327 (35%), Gaps = 27/327 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
              +    ++   +          ++  +I+   +    L +V G  G+ +L     +  
Sbjct: 16  AGLIGIVAIIAASVVGWFLFPDNLALLTRIIAIALLVLSLDLVTGYCGIATLGHAALFGA 75

Query: 77  GAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GAY   I  + +      L+  +  +     G++ G   L+  G    + ++ +  +F  
Sbjct: 76  GAYGAGIAAAHFGVTDPILMTVIGLLAGAVTGLVSGAVILRATGLAQLVLSIAVVHLFHE 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
              K    T G  G+         G               F +Y   +Y   + +  +S 
Sbjct: 136 AANKASGWTGGSDGLSGISPDPIFGI------------FEFDLYGRTVYIYAVILLLISF 183

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             + ++ R+      R ++++     ++  ++  A+L  + +S A  G++GA  A S   
Sbjct: 184 IFLRYVVRSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISGAVAGISGALNAISTQV 243

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +  D   F+ +   + +++LGG  SL      T + +   ++    N +++         
Sbjct: 244 VGLDSLSFTMSAEALVMLVLGGAGSLFGGLVGTVVFMWFEDVVSTANPFHW--------- 294

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                 T++   L  V+L     L   
Sbjct: 295 -----LTMVGALLIAVVLFAPRGLYGT 316


>gi|126731166|ref|ZP_01746974.1| branched-chain amino acid ABC transporter, permease protein
           [Sagittula stellata E-37]
 gi|126708468|gb|EBA07526.1| branched-chain amino acid ABC transporter, permease protein
           [Sagittula stellata E-37]
          Length = 393

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 48/367 (13%), Positives = 101/367 (27%), Gaps = 36/367 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +   L  L  +   +     G             + L   + A  + +V G  G+LSL  
Sbjct: 20  WFIALLGLFTLVVTVTSEAFGTGLVSTSFVKTLGKTLCLCLIAIAMDVVWGYCGILSLGH 79

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLL-----------------IPVSAMISGACGMIMGLP 113
              + IG Y+  +          +                     S +            
Sbjct: 80  FAFFGIGGYAIGMWLMYARTETIVARSMSNQIIPPTGQEISDAIASQIFGVVGASEFPPI 139

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
                   L +  +I+      ++  W    +   G+Y++     +   +   +      
Sbjct: 140 WAFAHSLPLQLLMVIVVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLYLFQNDSG 199

Query: 174 SSFV------------------IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                 +  I+  +       L   +  ++    + +  R IRD
Sbjct: 200 LRGNNGLSGLQNIPGATDVPQSVISIYFLWASALALGLGYVLFAFVTSGKMGSVIRAIRD 259

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++    L   +   KL  F +++   G+AGA +      ++P       +I +   V +
Sbjct: 260 DERRVRFLGYHVESYKLFVFTLTAVVSGIAGALYYPQAGIVNPAEIAPIASIYLAVWVAI 319

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG   L      T  +  +     G      N    +   +      L+  +   V L  
Sbjct: 320 GGRGRLYGAVLGTVFVTLLSSWFTGGGAPDINLGF-YTVKWTDWWLVLLGFSFVAVTLFA 378

Query: 336 SHSLLRL 342
              L  L
Sbjct: 379 PQGLGGL 385


>gi|123440623|ref|YP_001004617.1| branched-chain amino acid transporter permease subunit LivH
           [Yersinia enterocolitica subsp. enterocolitica 8081]
 gi|332159856|ref|YP_004296433.1| branched-chain amino acid transporter permease subunit LivH
           [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
 gi|122087584|emb|CAL10365.1| high-affinity branched-chain amino acid transport system, permease
           protein [Yersinia enterocolitica subsp. enterocolitica
           8081]
 gi|318607599|emb|CBY29097.1| high-affinity branched-chain amino acid transport system permease
           protein LivH [Yersinia enterocolitica subsp. palearctica
           Y11]
 gi|325664086|gb|ADZ40730.1| branched-chain amino acid transporter permease subunit LivH
           [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
 gi|330862611|emb|CBX72764.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Yersinia enterocolitica W22703]
          Length = 308

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 85/305 (27%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y I +Y   I+ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFIVIAALMMVGIDASWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
               +    +++                     +   I  I           +    R  
Sbjct: 72  LIGSAFLVSIVIASTYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLNQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + V                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLVTGQWTLAETNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     L        +   + F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLILGIAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|300309519|ref|YP_003773611.1| branched-chain amino acid ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300310521|ref|YP_003774613.1| branched-chain amino acid ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300072304|gb|ADJ61703.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
 gi|300073306|gb|ADJ62705.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 309

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 97/305 (31%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G L L++        +GA   + L          L  +
Sbjct: 8   IINGLVLGSMYALIALGYTMVYGVLNLINFAHGDILMVGAMVGLSLLKVVQQVAPGLPGI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++    G I     +    + +A   L  +     ++         +    +      
Sbjct: 68  VQLVIAIVGAIPVCIVVSLLIERIAYRPLRNAPRLAPLITAIGVSILLQTLAMMIWGRS- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  ++       +  +       +L         ++L + +T +  A R   +N +
Sbjct: 127 -PLPFPQVMPSDPVHIAGALISPTQIMLLALAVLAMVGLVLIVEKTKMGRAMRATAENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        +  FA+ +    +AG  +AA+       M  F   +   S  +LGG+
Sbjct: 186 IAGLMGVDANKVIVVTFAIGAGLAAIAGVMWAANYSTAQFAM-GFVPGLKAFSAAVLGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L  +  L  G       + L      +        I L +V+ +R   
Sbjct: 245 GNIYGAMLGGILLGLIESLGAGYIGDLTGNFLG-----SNYQDIFAFIVLIIVLTLRPSG 299

Query: 339 LLRLR 343
           ++  R
Sbjct: 300 IMGER 304


>gi|160936372|ref|ZP_02083741.1| hypothetical protein CLOBOL_01264 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440655|gb|EDP18393.1| hypothetical protein CLOBOL_01264 [Clostridium bolteae ATCC
           BAA-613]
          Length = 553

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/318 (9%), Positives = 83/318 (26%), Gaps = 9/318 (2%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y  I+ +   +      +      +   I ++  Q    +  A G++ ++   G   L+ 
Sbjct: 230 YIAIILIFIGLCIAAPVMKNVKLLTYNNILNILQQASPRMFLALGVAGLILLTG-TDLSI 288

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +G  +  I+  +   +  +   V        G+ +    +      L      + 
Sbjct: 289 GRMVGMGMTTATIIMHQGINTGAVFGHVFDFTGMPIGLRVVFALVM--CIILCTCFTAIG 346

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             F         I+     + +   + +    V         P   +        ++L  
Sbjct: 347 GFFTAKFKMHPFISTMANMLVIFGLVTYATKGVSFGAIEPAIPKMIIPKINGFPTIILWA 406

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 +     +T        +  N +A      ++    + AF ++    G       
Sbjct: 407 VAAIVIVWFIWNKTTFGKNLYAVGGNPEAAAVSGISVFGVTMGAFILAGILYGFGSWLEC 466

Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A         +     +  I+  ++      GG+  +S +     I   ++     +   
Sbjct: 467 ARMVGSGSAAYGQGWEMDAIAACVVGGVSFTGGIGKISGVVVGVLIFTVLIYSLTILGID 526

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +          T 
Sbjct: 527 TNLQFVFEGIIIITAVTL 544


>gi|218903088|ref|YP_002450922.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus AH820]
 gi|218538529|gb|ACK90927.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus AH820]
          Length = 333

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 60/325 (18%), Positives = 129/325 (39%), Gaps = 31/325 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V  L+           + +  +  QI I+ +FA    +++G  G++S    + + IGAY 
Sbjct: 15  VCMLICLSVFPFVNDSRSLLILFTQIFIFXIFAMSFDVLLGYTGIVSFGHCMFFGIGAYG 74

Query: 81  YVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +L  R      + ++ I  + +IS     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 75  VALLFDRQGVSITNFFIGIVAAIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLA 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T+G  G        F                         YYV L    +   +
Sbjct: 135 EKWRGLTHGGDGFTFGVPDVFRDRF-------------------TFYYVTLICLLIIFVL 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   ++
Sbjct: 176 LRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVN 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             +F     +  + + ++GG+ +L            +       +  Y+ S L  +    
Sbjct: 236 TTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPIF 286

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
            R T ++ +   +V+L+    L+  
Sbjct: 287 ERWTIILGLLYIIVLLVFPKGLVGT 311


>gi|239617487|ref|YP_002940809.1| inner-membrane translocator [Kosmotoga olearia TBF 19.5.1]
 gi|239506318|gb|ACR79805.1| inner-membrane translocator [Kosmotoga olearia TBF 19.5.1]
          Length = 307

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 96/313 (30%), Gaps = 18/313 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +   +      +Y + A G ++V G L L++      + +  Y      +   L  WL  
Sbjct: 2   QNFVNGLSLGSLYALIAIGYTMVYGILRLINFAHGDVFMMSVYFAFYFVTIGKLPWWLSF 61

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ + +   G  +   + K   +   ++ LI +      L     +          +  
Sbjct: 62  ALAILGAALLGFAIDRVAYKPIRNAPRVSALITAIGVSFFLESLAVVVFSGIPKSFRNIY 121

Query: 157 YFLGTTV------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                 +        +    +     + + +     L+    +   +   + RT I  A 
Sbjct: 122 PNFLNKMIIIGGHEEIKYGRKVIMGGLRFPLVSLVTLIITGIILVILWWIIYRTKIGMAM 181

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +  +      +   +       FA  SA   + G  +A+   +I P M  F   +   
Sbjct: 182 RAVSVDIPTTALMGINVDNVIGFTFAFGSALAAIGGLLWASRYPQIWPYM-GFMPGLKAF 240

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
              + GG+ S+        +L     +  G+             S            L +
Sbjct: 241 IAAVFGGIGSIQGAVIGGLLLGLTEIMLVGIFP-----------SLAGYRDAFAFFILII 289

Query: 331 VILMRSHSLLRLR 343
           ++ ++ + LL  +
Sbjct: 290 ILSLKPNGLLGKK 302


>gi|294812034|ref|ZP_06770677.1| Branched-chain amino acid ABC transporter permease [Streptomyces
           clavuligerus ATCC 27064]
 gi|294324633|gb|EFG06276.1| Branched-chain amino acid ABC transporter permease [Streptomyces
           clavuligerus ATCC 27064]
          Length = 329

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 105/305 (34%), Gaps = 7/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++      + IG +  + +       + L + +
Sbjct: 27  LANGLALGALYGLIAIGYTMVYGIVQLINFAHGEIFMIGGFGALTIYVWLPSGVSLAVAI 86

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             MI G     +G+ +   R  Y     L  +     ++         +  ++       
Sbjct: 87  PLMIIGGAIAAVGVATAAERFAY---RPLRGAPRLAPLITAIGLSIALQQLVWGFYPDAK 143

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +           +  ++ +    +VL+       ++ L++ ++    A +    +  
Sbjct: 144 KHKSFPEFTGDAFRITDDLLIQRADAFVLILAPLCMLALGLFVSKSRSGRAMQATAQDPD 203

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        + AFAV +AF  +A   +   + +I+ +M  F   +   +  +LGG+
Sbjct: 204 TAKLMGINTDRIIVMAFAVGAAFAAVAAVAYGLDKGQINFEM-GFILGLKAFTAAVLGGI 262

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L     L                 +++     +++I + LV   R   
Sbjct: 263 GNIYGAMVGGVVLGLAESLSIAYIEDIPGMSQLGGGAWSNVWAFVLLILVLLV---RPQG 319

Query: 339 LLRLR 343
           LL  R
Sbjct: 320 LLGER 324


>gi|239816118|ref|YP_002945028.1| urea ABC transporter permease [Variovorax paradoxus S110]
 gi|239802695|gb|ACS19762.1| urea ABC transporter, permease protein UrtC [Variovorax paradoxus
           S110]
          Length = 401

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 55/329 (16%), Positives = 105/329 (31%), Gaps = 36/329 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             +  ++  + L Y   A GL +V G  G+LSL   + + IG Y+  +            
Sbjct: 33  DIFRLNLVGKYLTYAFVAVGLVMVWGYGGVLSLGQGVFFGIGGYAMAMFLKLEASDPVTT 92

Query: 96  IPVSAMISGACGMIMGL-----PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              S            +       L F+   L++A ++++ +    L+ +        G+
Sbjct: 93  KIQSTPGIPDFMDWNQITELPALWLPFKSLPLSLALVVLAPMALAWLVSFAMFKRRVGGV 152

Query: 151 YVA-----------------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           Y A                          +  L     + +     +  +YYV +G+   
Sbjct: 153 YFAIITQAVALICTVLIIGQQGYTGGVNGMTDLKTMLGWDTRTDGAKYVLYYVCVGLLVA 212

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           S  +  W++ + +      +RD +         +   K+  F +++   G+ GA FA   
Sbjct: 213 SIVLCRWIQTSKLGTLLLAMRDKEDRVRFSGYDVSNFKVFIFCLAAGLSGIGGAMFALQV 272

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             +SP       +I ++    +GG  SL        ++     L              F 
Sbjct: 273 GFMSPSFVGIVPSIEMVIFCAVGGRMSLVGAVYGALLVNAGKTL--------------FS 318

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            SF      LM      V +     L  L
Sbjct: 319 ESFPDLWLFLMAGLFIGVTMAFPMGLAGL 347


>gi|166032302|ref|ZP_02235131.1| hypothetical protein DORFOR_02005 [Dorea formicigenerans ATCC
           27755]
 gi|166028025|gb|EDR46782.1| hypothetical protein DORFOR_02005 [Dorea formicigenerans ATCC
           27755]
          Length = 550

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/328 (10%), Positives = 87/328 (26%), Gaps = 9/328 (2%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+ F  +   Y  I+ +   +  +   +      +   I ++  Q    +  A G++ ++
Sbjct: 217 MTQFLYKNGLYIVIILIFIALCIITPIVKNTQLFTVTNILNILQQASPRMFLALGVAGLI 276

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
              G   L+      +G  +  I+      +    +          G I           
Sbjct: 277 LLTG-TDLSVGRMVGMGMVTATIIMHNGINTG--GVFGHIFDFSNMGTIPKALLALGVCI 333

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
            L     +++  F         I+     + +   + +    V         P+ F+   
Sbjct: 334 ILTTVFAMIAGFFMARFKMHPFISTMANMLIIFGLVTYATKGVSFGAIDPAIPNIFIPKA 393

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
                ++L        +     +T        +  N +A      ++    + AF ++  
Sbjct: 394 GRFPMIILWAIIAVVVVWFIWNKTTFGKNLYAVGGNPEAATVSGISVFKVTMGAFIMAGI 453

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGV 294
             G                 +    ++  I+  ++      GG+  +S +     I   +
Sbjct: 454 LYGFGSWLECLRMVGSGSAAYGQGWDMDAIAACVVGGVSFTGGIGKISGVVTGVLIFTSL 513

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                 +        +          T 
Sbjct: 514 TYSLTILGIDTNLQFIFEGIIILAAVTL 541


>gi|238789418|ref|ZP_04633204.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Yersinia frederiksenii ATCC 33641]
 gi|238722561|gb|EEQ14215.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Yersinia frederiksenii ATCC 33641]
          Length = 308

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 85/305 (27%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y I +Y   I+ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFIVIAALMMMGIDASWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
               +    +++                     +   I  I           +    R  
Sbjct: 72  LIGSAFLVSIVIASAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + V                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLVTGQWTLAETNGFAATISTMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     L        +   + F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLILGVAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|292670002|ref|ZP_06603428.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Selenomonas noxia ATCC
           43541]
 gi|292648303|gb|EFF66275.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Selenomonas noxia ATCC
           43541]
          Length = 294

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 88/303 (29%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G +++ G + L++      Y +GAY      +     +  ++  
Sbjct: 11  LINGISLGSIYALIALGYTMIYGIIKLINFAHGDIYMVGAYLGFYAITLGIPVLPAILIS 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+ S    ++        R        +    +   +                   +  
Sbjct: 71  MAVTSLLGVLVERFAYRPLRHAPRISVLITAIGMSFLLE------------YVTMAIVSP 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T  + I    F  + +I       ++     L   +   +R T I  A R    + +
Sbjct: 119 TPRTFPATISDISFDVAGLIISGQQLLIMGVTLVLMLILTYIVRSTKIGKAMRAASYDTE 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +           FA+ SA   +AG       + I P M      I      + GG+
Sbjct: 179 AAQLMGINADRIISITFAIGSALAAVAGVLIGIYYNAIDPLM-GLMPGIKAFVAAVFGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L        +L  V     G  F  F     F               L LV+L+R   
Sbjct: 238 GILPGAVVGGLVLGIVEAFISGFGFSMFRDAAAF-------------AILILVLLVRPAG 284

Query: 339 LLR 341
           +  
Sbjct: 285 IFG 287


>gi|56477220|ref|YP_158809.1| putative amino-acid transmembrane ABC transporter protein
           [Aromatoleum aromaticum EbN1]
 gi|56313263|emb|CAI07908.1| putative amino-acid transmembrane ABC transporter protein
           [Aromatoleum aromaticum EbN1]
          Length = 310

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 109/305 (35%), Gaps = 7/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A G ++V G LGL++        +GA + +        +   + P+
Sbjct: 8   LVNGLVVGSVYALVALGYTMVYGILGLINFAHGDLVMVGAMTALQTMLFLMGAAPGMSPL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +       I     L +  + LA   L  +      LI    ++     I +      
Sbjct: 68  AMLTLSLAVAIPVCMLLGYTMERLAYRRLRNAPRLAP-LITAIGMSFLLQTIAMMLWGRN 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T  + +      P + V        +++G   + A++I+ + +T +  A R   +N +
Sbjct: 127 YHTFPQLVSTVPLQPVAGVFVTPIQVTIVVGSALIMAALIVLVTKTRLGRAMRATAENHR 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           F + +A   +AG  +A++   I+     F   +   +  +LGG+
Sbjct: 187 VAALMGVDTNLIIALTFVIGAALAAVAGVMYASNYG-IAHYGMGFMPGLKAFTAAVLGGI 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L  V     G   +     + F    +        I L LV++ R   
Sbjct: 246 GNLGGAMLGGIVLGLVESFGAGYIEH-----MTFGLLNSSYQDIFAFIILGLVLIFRPTG 300

Query: 339 LLRLR 343
           LL  R
Sbjct: 301 LLGER 305


>gi|325972318|ref|YP_004248509.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy]
 gi|324027556|gb|ADY14315.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp.
           Buddy]
          Length = 392

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 86/314 (27%), Gaps = 18/314 (5%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +  L  V+      LF     S   + ++          A G++ V+   G + L+C   
Sbjct: 21  LAPLALVIIYAFFALFGRNFFSYTTLVNILDSSYYIGFIAIGVTFVI-ITGGIDLSCGTI 79

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
                         +G  +WL + +  ++S + G+  G+   + +          M    
Sbjct: 80  MMASTIIGGTAYKTWGWPMWLSLVLILLVSTSFGLFNGILVSRLKLPPFIATLGTMMISL 139

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
                       G   I    R         +   F                  L +   
Sbjct: 140 ------------GIGSIVSNVRSATFPARGAADSWFKGIFKYIAPDNASYPTGALVLFGT 187

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +    + L RT +      +  N++A       +   ++ A+ +S    G+ G  FAA  
Sbjct: 188 AFIAYIILTRTKMGRYIFAVGSNKEAARLSGVDVAKWEMMAYVISGFLAGVGGIAFAAVY 247

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
             + P   +  E   +   VI      GG  S+        I+  +      M+      
Sbjct: 248 TTVMPAQGQGFELYAIAGTVIGGTSLSGGAGSVLGTMIGVYIMSVLRAGLPSMDLQAQYQ 307

Query: 309 LLKFDCSFNMRHTT 322
                         
Sbjct: 308 TFFTGIVVLGAVML 321


>gi|310816777|ref|YP_003964741.1| branched-chain amino acid ABC transporter, permease protein
           [Ketogulonicigenium vulgare Y25]
 gi|308755512|gb|ADO43441.1| branched-chain amino acid ABC transporter, permease protein
           [Ketogulonicigenium vulgare Y25]
          Length = 650

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 41/321 (12%), Positives = 101/321 (31%), Gaps = 26/321 (8%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-- 87
           +G  +             IY + A GL+I  G +G++++       +GAY+  ++     
Sbjct: 351 VGLFQVADISLDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTAYVVQLFIP 410

Query: 88  -YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            Y +++ + +P + +++   G+ +    +        + TL+ +      L +   I  G
Sbjct: 411 DYTVALIVALPAAFLVAAIAGIALERLVI-RHLANRPLETLLATFGISIALQQLTKIIFG 469

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                V            S +      +  +        + +      A +++ L RT +
Sbjct: 470 TQARPVTAP---------SWLSGAWIYNDVLGISWIRIAIFVLALVFLALLLVILNRTRL 520

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R +  N     S+       K+  F + S   G+AG          S     +   
Sbjct: 521 GLEIRAVTQNPGMAASMGINPDRVKMLTFGLGSGIAGIAGVGIGLYAQVTSEMGSNYIVQ 580

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             +  +V    + ++        ++  + +     N     +   +   F +        
Sbjct: 581 SFMAVVVGG--VGNVWGTLAGATLIGVMQKGIEWFNPSNTLAAQTYMILFIIIFIQF--- 635

Query: 327 ALFLVILMRSHSLLRLRTPSN 347
                   R   ++ L+  + 
Sbjct: 636 --------RPRGIVALKGRAA 648


>gi|300312238|ref|YP_003776330.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300075023|gb|ADJ64422.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 288

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 55/269 (20%), Positives = 116/269 (43%), Gaps = 27/269 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
            +++   I +  M A  + + + S GLLSL       IGAY+  +L  ++ +   + +  
Sbjct: 11  YNTVIFSIGVNAMLALSIYVTL-SCGLLSLANAAFMGIGAYTASLLTMQFEMPFPIALAA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++     +++G+P+L+  G YLA+ATL   E+ + I++    IT G  G+     +  
Sbjct: 70  GGVLPALVALVIGIPTLRLSGVYLAMATLGFGEVVRVIVLNL-DITGGPMGLNGVPPITE 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                       ++ +  ++  ++  LRR+ I  A+  I++++ 
Sbjct: 129 WWH-------------------------IVLLLGVTIYVLARLRRSKIGRAFEAIKEDEI 163

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +   KL AF + +A  G+AG   A     I P+ + F   + ++++ + GG 
Sbjct: 164 AARLMGVNVAGYKLLAFVIGAAIAGVAGGLNAHFTFTIGPNNYGFENAVDILTMAVFGGT 223

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFN 307
           ++L      + IL  + E+      +   
Sbjct: 224 SNLIGPMIGSTILSLLPEVLRHFKDFRLA 252


>gi|269127445|ref|YP_003300815.1| urea ABC transporter permease protein UrtC [Thermomonospora curvata
           DSM 43183]
 gi|268312403|gb|ACY98777.1| urea ABC transporter, permease protein UrtC [Thermomonospora
           curvata DSM 43183]
          Length = 368

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 43/317 (13%), Positives = 94/317 (29%), Gaps = 27/317 (8%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG-------L 90
           +      + L + + A G+ +  G  G+L+L   + + +G Y+  +    +         
Sbjct: 33  FRLDELAKYLCFAIAALGIGLAWGQGGMLTLGQGVFFGLGGYAMGMYLKLHDAGGELPDF 92

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +W  +     +       +   +          A L      Q +   +  I +     
Sbjct: 93  MVWSGVEELPALWAPFRNPVIALAAVVVLPVTVAALLGALVFRQRVRGAYFAILSQALAA 152

Query: 151 YVA------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                      L      + +   FF F       +  +Y+V   +  +   +   L ++
Sbjct: 153 AFVILLVGQQGLTGGTNGLTNFYDFFGFELEAESTQRGLYFVTAVVLGVLYLLARQLVKS 212

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                   +RD +     L       K   FA+S+   G+AGA F      ISP +    
Sbjct: 213 RFGRLLIAVRDGEDRVRFLGYNPATVKTITFAISAGMAGLAGALFVPVAGIISPSLLGVV 272

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
            ++ ++  V +GG  +L+       ++                    F   +      L 
Sbjct: 273 PSLELVVAVAIGGRYALAGAILGAIVM--------------NYGKTAFSEEWAGGWLYLQ 318

Query: 325 VIALFLVILMRSHSLLR 341
                 V+ +     + 
Sbjct: 319 GALFIGVMTLAPKGAIG 335


>gi|224541725|ref|ZP_03682264.1| hypothetical protein CATMIT_00897 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525329|gb|EEF94434.1| hypothetical protein CATMIT_00897 [Catenibacterium mitsuokai DSM
           15897]
          Length = 290

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 100/303 (33%), Gaps = 27/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A G ++V G   +++         GAY  +I      +     I  
Sbjct: 8   IINGLSTGSMYALVAIGYTMVYGIAKMINFAHGDIIMAGAYFALIAM--GFVGPIPAILF 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S + + A G+I    + K      ++  LI +     +L     +  G A          
Sbjct: 66  SIVATAALGVITEKVAYKPLRGKGSLEVLITAIGVSYLLENVFLLIFGSA---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T   ++         +  +      L+     +A ++ ++ +T +  A R + ++Q 
Sbjct: 116 -ARTFPQIMPKGTINLGGISIKYITVITLVVTAVCTAVLLFFINKTKLGKAMRAVSEDQG 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S    +AG  +  +   I+P        I      +LGG+
Sbjct: 175 AAQLMGINVNTTVSLTFAIGSGLGAIAGVIYGCAYSLITPY-IGLMLGIKAFIAAVLGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L     L        F+               ++   L +V+L++   
Sbjct: 234 GSVPGAMVGGLMLGVAESLTIAYISSDFSDA-------------VVFAILIIVLLVKPAG 280

Query: 339 LLR 341
           L  
Sbjct: 281 LFG 283


>gi|238750719|ref|ZP_04612218.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Yersinia rohdei ATCC 43380]
 gi|238711109|gb|EEQ03328.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Yersinia rohdei ATCC 43380]
          Length = 308

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 86/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDASWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
               +    +++                     +   I  I           +    R  
Sbjct: 72  LIGSAFLVSIVIASAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + V                      + +       ++ +++R + +  A R   ++ 
Sbjct: 132 ALPSLVTGQWTLGEANGFAATISTMQLTIWIVTFLAMLALTIFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGALMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     L        +   + F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLILGIAEALTSAYLSTEYKDAVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|239820782|ref|YP_002947967.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239805635|gb|ACS22701.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 352

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 60/327 (18%), Positives = 120/327 (36%), Gaps = 33/327 (10%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             LA    L+L         +       ++I  Y +FA   +++ G  G++S+     + 
Sbjct: 20  IALAAGTALVLIAASLPLWGEPSWMREFVEIACYFIFAMMWNLLAGYGGMVSIGQQAFFG 79

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            G Y  ++LG+   ++ ++ +P+ A+ +G   + +   + +  G Y AI T +++E+F+ 
Sbjct: 80  FGGYVMLMLGNFADVNPFVAVPLGALAAGLIAVPVSFVAFRLSGGYFAIGTWVIAEVFRL 139

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G      A R                        E   Y++ L     + 
Sbjct: 140 SFANVSAVGGGSGTTLTALR-----------------GIERTTRERTTYWMALACVVAAV 182

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +++    R+    A   IRDN+ A  S    +   KL+ + V++   G+AGA +     R
Sbjct: 183 ALVYLFLRSKRGLALLAIRDNEVAAESQGVPVARMKLAVYVVAAFGAGLAGALYFVGNLR 242

Query: 256 ISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           ISPD  F  +     I +V++GG+  +        +   + +       +Y         
Sbjct: 243 ISPDAAFSVNWTAFAIFMVVIGGIGRIEGPLVGALVFWALNKFLSDYGTWYLLG------ 296

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                    + +    V L     L  
Sbjct: 297 ---------LGLLAICVTLFFKQGLWG 314


>gi|152968877|ref|YP_001333986.1| high-affinity branched-chain amino acid ABC transporter membrane
           protein [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|206579856|ref|YP_002240185.1| branched-chain amino acid ABC transporter, permease protein
           [Klebsiella pneumoniae 342]
 gi|238893285|ref|YP_002918019.1| ABC transport system permease component [Klebsiella pneumoniae
           NTUH-K2044]
 gi|262042363|ref|ZP_06015525.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|288936930|ref|YP_003440989.1| inner-membrane translocator [Klebsiella variicola At-22]
 gi|330006821|ref|ZP_08305708.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Klebsiella sp. MS 92-3]
 gi|150953726|gb|ABR75756.1| high-affinity branched-chain amino acid transport protein (ABC
           superfamily, membrane) [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|206568914|gb|ACI10690.1| branched-chain amino acid ABC transporter, permease protein
           [Klebsiella pneumoniae 342]
 gi|238545601|dbj|BAH61952.1| ABC transport system permease component [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
 gi|259040271|gb|EEW41380.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|288891639|gb|ADC59957.1| inner-membrane translocator [Klebsiella variicola At-22]
 gi|328535735|gb|EGF62178.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Klebsiella sp. MS 92-3]
          Length = 299

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 52/291 (17%), Positives = 101/291 (34%), Gaps = 11/291 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++        +GA+S + L S  GL   + + +
Sbjct: 10  VVNGMSLGGMYALIAIGYTMVYGVLRLINFAHADVMMVGAFSTLFLFSSVGLPFGVAVFL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  + G  GM++   + +       I+ LI +      L     +  G +  + +   +F
Sbjct: 70  TLGLCGLFGMLIDRVAYRPLRQASKISMLITAIGVSFFLENLFNVLFGGSSRFFSAPDFF 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T               VI     + V L    L  +I+  L RT    A R +  +  
Sbjct: 130 NQTR----------AFGSVIITNVAWIVPLITVLLLLAILWLLYRTRYGMAIRAVAFDVN 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           FA+ S+   + G F++ S   I P M      +   +  +LGG+
Sbjct: 180 TVRLMGIDANRIISLVFALGSSLAALGGVFYSISYPTIDPLM-GVLIGLKAFAAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            S++       IL     +   +          F   F +       + + 
Sbjct: 239 GSVTGAVLGGFILGFTEVVAVAIFPELGGYKDAFAFLFLILVLLFRPVGIM 289


>gi|270264295|ref|ZP_06192562.1| transporter [Serratia odorifera 4Rx13]
 gi|270041944|gb|EFA15041.1| transporter [Serratia odorifera 4Rx13]
          Length = 308

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +    +  +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMLGIDVGWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
               +    +++                     +   I  I           +    R  
Sbjct: 72  LIGAAFLVSIVIASAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + V                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLVTGQWVLGESNGFAATISTMQLIIWVVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L     L        +  ++ F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLVLGVAEALTSAYLSTEYKDVVSF-------------ALLIVVLLIMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|302533851|ref|ZP_07286193.1| urea ABC transporter, permease UrtB [Streptomyces sp. C]
 gi|302442746|gb|EFL14562.1| urea ABC transporter, permease UrtB [Streptomyces sp. C]
          Length = 309

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 100/307 (32%), Gaps = 12/307 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY--SYVILGSRYGLSIWLLI 96
           + +  +   +Y + A G ++V G + L++      +  G +    V L    G ++WL +
Sbjct: 8   LVNGLLLGSMYGLVAIGYTMVYGIVQLINFAHGEIFMTGGFGALTVWLMLPTGTTMWLAL 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P+  + +     ++ + + +F    L  A  +        LI    ++        A   
Sbjct: 68  PLMLIGAVIVATLIAVGAERFAYRPLRSAPRLAP------LITAIGLSIVLQQAVWAWYP 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
               +     I    F    +  +    +++L      A +  ++++T      +    +
Sbjct: 122 DAKSSVKFPEIPGGPFHLGSITIQTGDIFLVLAAPISMAFLGFFVKKTRTGRGMQATAQD 181

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 +          AFA+ +AF  +    +      +   M  F   +   +  +LG
Sbjct: 182 PDTAKLMGINTDRIITIAFALGAAFAAVGAVAYGLKYGEVQYRM-GFILGLKAFTAAVLG 240

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++        +L     L                 S+      +++I + L    R 
Sbjct: 241 GIGNIYGAMVGGLVLGLAETLTTAYIADVPGMSQLGGQSWGNTWAFVLLILVLL---FRP 297

Query: 337 HSLLRLR 343
             L+  R
Sbjct: 298 QGLMGER 304


>gi|306845722|ref|ZP_07478291.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO1]
 gi|306274043|gb|EFM55870.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO1]
          Length = 328

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 123/343 (35%), Gaps = 28/343 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+  +  L +       L  +  ++    +G       + ++  +I+   +    L +V 
Sbjct: 1   MTEMTQPLPQTRPSYAGLIGIVAIIAASIVGWFLFPDNL-ALLTRIIAIALLVLSLDLVT 59

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           G  G+ +L     +  GAY   I  + +      L+  +  +     G+I G   L+  G
Sbjct: 60  GYCGIATLGHAALFGAGAYGAGIAAAHFGITDPILMTVIGLLAGAVTGLISGAVILRATG 119

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
               + ++ +  +F     K    T G  G+         G               F +Y
Sbjct: 120 LAQLVLSIAVVHLFHEAANKASGWTGGSDGLSGISPDPIFGI------------FEFDLY 167

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              +Y   + +  +S   + ++ R+      R ++++     ++  ++  A+L  + +S 
Sbjct: 168 GRTVYIYAVILLLISFIFLRYVVRSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISG 227

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  G+ GA  A S   +  D   F+ +   + +++LGG  SL      T + +   ++  
Sbjct: 228 AVAGIGGALNAISTQVVGLDSLSFTMSAEALVMLVLGGAGSLFGGLVGTVVFMWFEDVVS 287

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             N +++               T++   L  V+L     L   
Sbjct: 288 TANPFHW--------------LTMVGALLIAVVLFAPRGLYGT 316


>gi|33599590|ref|NP_887150.1| putative branched-chain amino acid transport system permease
           protein [Bordetella bronchiseptica RB50]
 gi|33567186|emb|CAE31100.1| putative branched-chain amino acid transport system permease
           protein [Bordetella bronchiseptica RB50]
          Length = 298

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 63/325 (19%), Positives = 127/325 (39%), Gaps = 37/325 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L  +  +   L         YI ++ + + +  + A  L  V+  +G L+      + IG
Sbjct: 7   LVFILFIAAVLVGCIALGSGYIGNLVVWMSVAAVMATSLRFVL-LIGELNFATAAFFGIG 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY    + +   L  +L++ +SA+++ A  ++ G  +LK +G Y  +     +E  + + 
Sbjct: 66  AYCTGYIANYLDLPFFLILALSALLALAVSVVFGCITLKVKGPYFLLIGFAFTEALRILY 125

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +   +  G +G+       +L                        +Y    +CF     
Sbjct: 126 TR-TDVLGGNSGLVGIFPPIWLEAH--------------------YHYFATVLCFALIVA 164

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +L++ R+ +   +  IRDN+    SL   +   K+  FAV+SA  G+AG+  A + + IS
Sbjct: 165 LLFVERSNLGKVFVAIRDNENVVRSLGIPVFMTKVLCFAVASAVAGLAGSVHAYASNVIS 224

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F F  +   ++ + +GG  S         +L+G+      +                
Sbjct: 225 PLDFGFMLSTFALAYLKVGGEDSPLGPIIGAVLLVGIASYAQTLGG-------------- 270

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                L  +A+ + +L     L+ L
Sbjct: 271 -NEHILYGLAIIVSVLFMPKGLMGL 294


>gi|328545162|ref|YP_004305271.1| branched-chain amino acid ABC transporter permease [polymorphum
           gilvum SL003B-26A1]
 gi|326414904|gb|ADZ71967.1| Branched-chain amino acid ABC transporter, permease protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 353

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 110/320 (34%), Gaps = 11/320 (3%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                         +I I+++      +++G  G++S    + + IGAY   +  S  G 
Sbjct: 31  PFLFPGTKPLETAARICIFIVLVASYDMLLGYTGIVSFAHTMFFGIGAYGTALALSSAGP 90

Query: 91  SI---WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
           S           A ++    + +GL SL+ +  + A+ TL ++  F  ++ +   +T G+
Sbjct: 91  SFVSILWGSAAGAGVAATLALAIGLFSLRVKAIFFAMVTLAIASAFAVLVSQLSHLTGGE 150

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
            G+                 R F          +  YY++ G+       +L +  +   
Sbjct: 151 DGLNYRIPRELTPAFRLVEERVFGVRIDG---RVLSYYLVFGVSLALFLAMLRIVNSPFG 207

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DMFKFSEN 266
              + +RDN     ++   +++ + +A  +S+    +AG+  A       P         
Sbjct: 208 RTLQAVRDNAFRAEAIGYRVVWYRTTATVLSAVMAALAGSLLALWLRYTGPATTLSMEIM 267

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD----CSFNMRHTT 322
           I ++ +V++GGM ++        + I        +      +              R   
Sbjct: 268 IDILLMVVIGGMGTMYGAVIGATLFILAQTYLQDLMGAAEKATSAVPLVSMLIAPERWLL 327

Query: 323 LMVIALFLVILMRSHSLLRL 342
            + +   L +      ++  
Sbjct: 328 WLGVLFVLSVYFFPAGVVGR 347


>gi|290961244|ref|YP_003492426.1| ABC transporter transmembrane protein [Streptomyces scabiei 87.22]
 gi|260650770|emb|CBG73887.1| putative ABC transporter integral membrane subunit [Streptomyces
           scabiei 87.22]
          Length = 310

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 101/308 (32%), Gaps = 13/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---SYVILGSRYGLSIWLL 95
           + +  +   +Y + A G ++V G + L++      + +G +   +  +     G S+W+ 
Sbjct: 8   LVNGLLLGSMYGLVAIGYTMVYGIVQLINFAHGEIFMVGGFGALTMYLYVLPDGTSMWVA 67

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +P+  +      +++ + + +F    L  A  +        LI    ++        A  
Sbjct: 68  LPLMLIGGILVAVLVAVGAERFAYRPLRTAPRLAP------LITAIGLSLALQQAVWAWY 121

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                      I    F    V  +    ++LL      A +  ++ +T      +    
Sbjct: 122 PNARSAITFPQIEGGPFQIGNVTIQTGDIFLLLAAPISMAILAYFVMKTRTGRGMQATAQ 181

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +      +        + AFA+ +AF  +    +      +   M  F   +   +  +L
Sbjct: 182 DPDTAKLMGINTDRIIVVAFALGAAFAAVGSVAYGLKYGEVQFRM-GFILGLKAFTAAVL 240

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++        +L     L                 S+      +++I + LV   R
Sbjct: 241 GGIGNIYGAMLGGLVLGVAEALSTAYISDIPGMDQFGSQSWANVWAFVLLILVLLV---R 297

Query: 336 SHSLLRLR 343
              LL  R
Sbjct: 298 PQGLLGER 305


>gi|114762283|ref|ZP_01441741.1| branched-chain amino acid ABC transporter, permease protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114544901|gb|EAU47905.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. HTCC2601]
          Length = 295

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 91/306 (29%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIP 97
           + +  +   ++ + A GL+++ G + +++        +G Y   +L +   +  +L    
Sbjct: 8   VANGLMLGGLFAIVAVGLTLIFGIVKVINFAHGEFLMVGMYLTFLLSTGMDVHPYLTAAA 67

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           V+  +     +   L              +  +      L+    +  G           
Sbjct: 68  VAPALFVLGALTQRLLIQPLMSARDEHVQIFATVGLSTALMNLALLVFGADIANTPAHGV 127

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                +  +                  +V      L   + L++++T    A R    N+
Sbjct: 128 RSQVMLGEVRILTG-----------QLWVFGAAILLVIGLQLFMKKTRTGRAIRATAQNR 176

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A   +     F  +  F + +A +G+  +  A            F    I    V+LGG
Sbjct: 177 AAARLMGINDKFIYILTFGLGAACVGLGSSLIAPLYPTSPTIGTYFVL--IAFVCVVLGG 234

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        ++  V  L                   +     ++     L+++++  
Sbjct: 235 LGSIPGAFFGALVIGLVDALSGFYIG-------------SDLREAVVFTIFLLILILKPS 281

Query: 338 SLLRLR 343
            L   R
Sbjct: 282 GLFGTR 287


>gi|70728679|ref|YP_258428.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68342978|gb|AAY90584.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas fluorescens Pf-5]
          Length = 307

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/290 (12%), Positives = 86/290 (29%), Gaps = 2/290 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I  +   +     +P+
Sbjct: 11  LVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIAIAGLAMMGLDSVPL 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
               +    +++                   + +   I  I           +    +  
Sbjct: 71  LMTAAFIASIVVTSAYGYSIERIAYRPLRGSNRLIPLISAIGMSIFLQNTVLLAQDSKDK 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   +          +  V+       V +        + L++ R+ +  A R   ++ 
Sbjct: 131 SIPNLIPGNFSIGPGGAHEVLISYMQIVVFVVTLIAMLGLTLFISRSRLGRACRACAEDI 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +A    +     I+P+   F   +   +  +LGG
Sbjct: 191 KMANLLGINTNNIIALTFVIGAALAAIAAVLLSMQYGVINPNA-GFLVGLKAFTAAVLGG 249

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           + S+        +L         +    +  ++ F     +       I 
Sbjct: 250 IGSIPGAMLGGLVLGVAEAFGADVFGDQYKDVVAFGLLVLVLLFRPTGIL 299


>gi|62290657|ref|YP_222450.1| branched-chain amino acid ABC transporter permease [Brucella
           abortus bv. 1 str. 9-941]
 gi|82700571|ref|YP_415145.1| inner-membrane translocator [Brucella melitensis biovar Abortus
           2308]
 gi|254694437|ref|ZP_05156265.1| High-affinity branched-chain amino acid transport system permease
           protein LIVH [Brucella abortus bv. 3 str. Tulya]
 gi|254698096|ref|ZP_05159924.1| High-affinity branched-chain amino acid transport system permease
           protein LIVH [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730980|ref|ZP_05189558.1| High-affinity branched-chain amino acid transport system permease
           protein LIVH [Brucella abortus bv. 4 str. 292]
 gi|256258200|ref|ZP_05463736.1| High-affinity branched-chain amino acid transport system permease
           protein LIVH [Brucella abortus bv. 9 str. C68]
 gi|260547106|ref|ZP_05822844.1| high-affinity branched-chain amino acid transport system permease
           LIVH [Brucella abortus NCTC 8038]
 gi|260755481|ref|ZP_05867829.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870]
 gi|260758704|ref|ZP_05871052.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292]
 gi|260762538|ref|ZP_05874875.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884501|ref|ZP_05896115.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68]
 gi|62196789|gb|AAX75089.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|82616672|emb|CAJ11755.1| Bacterial inner-membrane translocator [Brucella melitensis biovar
           Abortus 2308]
 gi|260095471|gb|EEW79349.1| high-affinity branched-chain amino acid transport system permease
           LIVH [Brucella abortus NCTC 8038]
 gi|260669022|gb|EEX55962.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292]
 gi|260672964|gb|EEX59785.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675589|gb|EEX62410.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870]
 gi|260874029|gb|EEX81098.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68]
          Length = 302

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 103/313 (32%), Gaps = 33/313 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89
           + +      IY + A G ++V G +G+++      + +GA+         +  I      
Sbjct: 8   VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 67

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L + L++ V+ +++G C   +   + +       +A LI +      L  +  +T G   
Sbjct: 68  LMLLLMMIVAMLLTGLCSWAIERVAYQPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             V   L                  S V   +    V++    L       + RT++  A
Sbjct: 128 KPVPQLLNGSYELF----------GSGVTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 177

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +    +AG  + +    IS     F   +  
Sbjct: 178 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 236

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +  L        +  +  F               L 
Sbjct: 237 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 283

Query: 330 LVILMRSHSLLRL 342
           +V++     +L  
Sbjct: 284 IVLIFMPSGILGR 296


>gi|309779226|ref|ZP_07673989.1| amino-acid transmembrane lipoprotein ABC transporter [Ralstonia sp.
           5_7_47FAA]
 gi|308922030|gb|EFP67664.1| amino-acid transmembrane lipoprotein ABC transporter [Ralstonia sp.
           5_7_47FAA]
          Length = 293

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 53/303 (17%), Positives = 109/303 (35%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y +FA G ++V G LG+++L+    + +GAY+ + +   + L +W  + V
Sbjct: 6   LVNALSLGCVYALFALGFTLVFGILGVINLSHGAVFMLGAYAALQVVLHFELPLWAALAV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++SG  G+I+ +         L       +      +I                    
Sbjct: 66  GFVVSGVAGLIIDVL--------LLRPLRRRNAPHLIPMIATIGAGIAINNAMQGVFGAE 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L+         +        +++    L A+++L L+RT +  A R I ++ K
Sbjct: 118 NLRFPAGLVSDASLDLGGIHLTPLELSIIVLSFALMAALMLLLKRTQLGRALRAIAESPK 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +    L     ++A  G++G       + + P M +   +  + +++ILGG+
Sbjct: 178 AAALLGINVEGLFLLTSFAAAALGGLSGVLIGLYSNAVFPLMGQPMLHKGI-AVIILGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +         L     L            + F               LFL++L+R   
Sbjct: 237 GDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG-------------LLFLILLVRPQG 283

Query: 339 LLR 341
           L  
Sbjct: 284 LFG 286


>gi|315504689|ref|YP_004083576.1| inner-membrane translocator [Micromonospora sp. L5]
 gi|315411308|gb|ADU09425.1| inner-membrane translocator [Micromonospora sp. L5]
          Length = 316

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 87/306 (28%), Gaps = 20/306 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY------GLSIWLLI 96
             Q  IY + A G ++V G L L++      +  GA++ +   + +       +S    I
Sbjct: 18  LTQGAIYALVALGYTLVYGVLRLINFAHSEVFIAGAFAAIWTWNGFGLDQNSQVSGIGSI 77

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +++     I    +               +      LI     +   +  +     
Sbjct: 78  MFYLLVAMIVAAIASAGTATVIERVAYRPLRKRNAPPLAFLITAIGASIAISEAFGVYTR 137

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                    +     F  + V  +      +     +  ++  ++ R+      R +  +
Sbjct: 138 RRPEGAPILVSSEPLFHVAGVPIDAVQLLTIGSALVMMFALDQFINRSRTGRGIRAVAQD 197

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 +        L  F       G+AG  +      ++     F   +   +  +LG
Sbjct: 198 ANTAALMGVNKDRIILMVFIAGGTMAGVAGLLYDVRIQTLTY-SVGFLLGLKAFTAAVLG 256

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +L        +L  V     G+    +     F               L ++++ R 
Sbjct: 257 GIGNLRGALVGGLLLGVVENYAAGLFGSQWKDFAAF-------------AVLVVLLMFRP 303

Query: 337 HSLLRL 342
             LL  
Sbjct: 304 TGLLGE 309


>gi|90420913|ref|ZP_01228818.1| permease component of ABC type branched chain amino acid
           transPORTER [Aurantimonas manganoxydans SI85-9A1]
 gi|90334888|gb|EAS48660.1| permease component of ABC type branched chain amino acid
           transPORTER [Aurantimonas manganoxydans SI85-9A1]
          Length = 305

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 101/312 (32%), Gaps = 28/312 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY--------VILGSRYGL 90
           + +      IY + A G ++V G +G+++      + IG++           +  +   L
Sbjct: 8   LINGITLGSIYGLIAIGYTMVYGIIGMINFAHGEIFMIGSFVSLTVFLALAALGITFLPL 67

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + +++ V+ + +   G  +   + +       +A LI +      L  +  +T G    
Sbjct: 68  VLLIMVLVAMLCTSLWGWTVERVAYRPLRGSFRLAPLITAIGMSIFLQNFVQVTQGARVK 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +  ++    T + S           V        ++     L A   L + RT++    
Sbjct: 128 PLPPQIQGGITLMDSP------SGIVVQLSYMQMIIIGMTIVLMAGFSLLISRTSLGRQQ 181

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    ++K    L   +       F + ++   +AG  +      I      F   +   
Sbjct: 182 RACEQDRKMASLLGVNVDRTISLTFVLGASLAAVAGMMYLLYYGVIDFY-IGFIAGVKAF 240

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ SL         +  +     G     +  +  F               L +
Sbjct: 241 TAAVLGGIGSLPGAMLGGLAIGLIETFWSGYFSVEYKDVAAFS-------------ILAI 287

Query: 331 VILMRSHSLLRL 342
           V++     LL  
Sbjct: 288 VLIFMPSGLLGR 299


>gi|37527944|ref|NP_931289.1| branched-chain amino acid transporter permease subunit LivH
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36787380|emb|CAE16469.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 308

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 82/305 (26%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW-LLIP 97
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +    L   
Sbjct: 12  MLNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEIYMIGSYVSFMVIAALIMMGIDLGWL 71

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           +         +I                      I     I           +  + R  
Sbjct: 72  LITAAFLTSIVIAAAYGWSIERVAYRPVRHSKRLIALISAIGMSIFLQNYVSLSQSSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L   +                      + +        + +++R + +  A R   ++ 
Sbjct: 132 ALPGLITGQWVLGESDGFSASISAMQLTIWIVTFLAMLILTMFIRYSRMGRACRACAEDV 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTNRVISLTFVIGAVMAAIAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     L        +   + F               L +V+L    
Sbjct: 251 IGSIPGAMIGGLILGISEALTSAYLSTEYKDAVSF-------------ALLIVVLLFMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|153011714|ref|YP_001372928.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
 gi|151563602|gb|ABS17099.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
          Length = 333

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 105/307 (34%), Gaps = 3/307 (0%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            +IL +      L LF F      Q    S+  +I+IY + A  L++++G  G++S    
Sbjct: 3   YRILFVFLGCVALALFPFGAEALGQTAASSLVARIMIYAIAAASLNLILGYGGMVSFGHA 62

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             + IG+Y   IL   +     L   +         +   +         +    L  S 
Sbjct: 63  AFFGIGSYVVGILYFHHAEETLLFGFIPGSDQFLITVPAAMLVAGLAALVIGALALRTSG 122

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +   ++                    + G     + R        +  +  MYYV+L   
Sbjct: 123 VQFIMITLAFAQM---LFFLFVSLKTYGGEDGIIVRRANDLFGLSLRDKTTMYYVILVSM 179

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L    +  +  ++       IR +++   ++       KL  F ++    G+AGA    
Sbjct: 180 ILYFGFLWRVVHSSYGAVLSGIRQSERRMTAMGIETYRYKLYGFVLAGMGAGLAGALLTI 239

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                SPD   ++++  ++ +VILGG+ +        A  + +         ++  ++  
Sbjct: 240 FMRFASPDTLHWTKSGELMVMVILGGVGTFFGPIWGAAAFLILQTYLASWTEHWQLAMGI 299

Query: 312 FDCSFNM 318
                 +
Sbjct: 300 ILLVVVL 306


>gi|157368478|ref|YP_001476467.1| branched-chain amino acid transporter permease subunit LivH
           [Serratia proteamaculans 568]
 gi|157320242|gb|ABV39339.1| inner-membrane translocator [Serratia proteamaculans 568]
          Length = 308

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 87/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +    +  +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMVGIDVSWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
                    +++                     +   I  I           +    R  
Sbjct: 72  LIGAGFLVSIVIASAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + V                      + +       ++ +++R + +  A R   ++ 
Sbjct: 132 ALPSLVTGQWVLGESNGFAATITTMQLIIWVVTFLAMLALTIFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L     L        +  ++ F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLVLGVAEALTSAYLSTEYKDVVSF-------------ALLIVVLLIMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|311106316|ref|YP_003979169.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310761005|gb|ADP16454.1| inner-membrane translocator 37 [Achromobacter xylosoxidans A8]
          Length = 315

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 57/311 (18%), Positives = 111/311 (35%), Gaps = 38/311 (12%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                   +   GI  L+  + A G +I+ G  G  S    + Y +G+Y   I  +++ L
Sbjct: 19  VPWYGSDVLVQFGINTLLLAVLAQGWNIIGGYAGYASFGNSVFYGLGSYGVAIAMAQWEL 78

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                + + A ++    +++G+P L+ RG Y AIATL ++++   I+             
Sbjct: 79  PFAAGLALGAALAVVFAVLLGVPVLRLRGHYFAIATLALAQVMTAIVSN----------- 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                       +    +        +  +   Y + LG+  L+   + WL R+      
Sbjct: 128 ------------IGLAGQNIGLVLQPLNNDPLFYELSLGLLTLATLTVAWLTRSRFGFGL 175

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIV 269
             IR+N++    +       K+ AFA+S  F  +AG   A     + P+  F  S N+ +
Sbjct: 176 IAIRENEEGAAVMGVNTTLYKVEAFAISGVFSALAGGIHAYWITFLDPESAFDISLNVKM 235

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           I + + GG  ++         L  + EL                              + 
Sbjct: 236 IIMAVFGGAGTVLGPVVGAFSLSAISELLSS--------------EITSVAGLFFGAVIV 281

Query: 330 LVILMRSHSLL 340
             +++    L 
Sbjct: 282 AAVVLMPRGLA 292


>gi|296535184|ref|ZP_06897405.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter [Roseomonas cervicalis ATCC 49957]
 gi|296264492|gb|EFH10896.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter [Roseomonas cervicalis ATCC 49957]
          Length = 334

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 107/264 (40%), Gaps = 14/264 (5%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G +GLLS    + + +G Y        +G +  L I     
Sbjct: 54  FLMKLLCFALFACAFNLLIGYVGLLSFGHAMFFGMGGYISAHAAKVWGFTPELAILAGGA 113

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           +  A G++ G  +++ +G Y A+ TL ++++     ++    T G+ GI    R    G 
Sbjct: 114 VGAALGVVAGWIAIRRQGIYFAMITLALAQMVYFFCLQAP-FTGGEDGIQRVPRGALFGI 172

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
              S                  Y+V+ G+      ++  +  +        IR+N+    
Sbjct: 173 IDLSRDMAM-------------YWVVAGVFLAGFLLVNRIIHSPFGQVLTAIRENEPRAI 219

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL       KL AF +S+   G+AG   +      +     ++ +  V+ + +LGG+ ++
Sbjct: 220 SLGYRSDDYKLMAFTLSATLAGIAGGTKSLVFGIATLTDVYWAMSGEVVLMTLLGGLGTV 279

Query: 282 SKIAKATAILIGVVELCCGMNFYY 305
                  A+++ +         + 
Sbjct: 280 FGPVMGAAVIVTMQNYLAEFGAWV 303


>gi|237653137|ref|YP_002889451.1| inner-membrane translocator [Thauera sp. MZ1T]
 gi|237624384|gb|ACR01074.1| inner-membrane translocator [Thauera sp. MZ1T]
          Length = 310

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 54/305 (17%), Positives = 102/305 (33%), Gaps = 7/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +  +   +Y + A G ++V G LGL++        +GA   +            + P+
Sbjct: 8   FINGLVIGSVYALIALGYTMVYGILGLINFAHGDVLMVGALVALQTMLFLMGMAPGMSPL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +       ++    L F  + LA   L  +      LI    ++     + +      
Sbjct: 68  VMLAIALAVAMVICMLLGFTMERLAYRRLRNAPRLAP-LITAIGVSFLLQTLAMIIWGRN 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T  + +      P   V        +++    L   ++L + RT I  A R   +N +
Sbjct: 127 YHTFPQLISTTPLQPIPGVFVTPVQIAIVVVSALLMVGLLLLVNRTRIGRAMRATAENHR 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           F + +A   +AG  FA++   I+     F   +   +  +LGG+
Sbjct: 187 VASLMGVDTNAVIALTFVIGAALAAVAGVMFASNYG-IAHYGMGFMPGLKAFTAAVLGGI 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L  V     G   +     L F    +        I L LV++ R   
Sbjct: 246 GNLGGAMLGGVVLGLVESFGAGYIEH-----LTFGFLNSSYQDIFAFIILGLVLIFRPTG 300

Query: 339 LLRLR 343
           LL  R
Sbjct: 301 LLGER 305


>gi|255281505|ref|ZP_05346060.1| L-arabinose ABC transporter, permease protein AraH [Bryantella
           formatexigens DSM 14469]
 gi|255267993|gb|EET61198.1| L-arabinose ABC transporter, permease protein AraH [Bryantella
           formatexigens DSM 14469]
          Length = 551

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/318 (9%), Positives = 84/318 (26%), Gaps = 9/318 (2%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y  I+ +   +  +   +      +   + ++  Q    +  A G++ ++   G   L+ 
Sbjct: 228 YIAIVIIFIALCIITPIVKHTPLLTYNNVLNILQQASPRMFLALGVAGLILLAG-TDLSI 286

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +G  +  I+  +   +    +           ++  +         L      ++
Sbjct: 287 GRMVGMGMTTATIIMHQGVNTG--SVFGHVFDFTGIPVVGRVFLGLLACVVLCTFFTTIA 344

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             F         I+     + +   + +    V         PS  +        ++L  
Sbjct: 345 GFFTAKFKMHPFISTMANMLVIFGLVTYATKGVSFGAIESSIPSMIIPKINGFPTIILWA 404

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 +     +T        +  N +A      ++    + AF ++    G       
Sbjct: 405 VAAVIIVWFIWNKTTFGKNLYAVGGNAEAAAVSGISVFKVTVGAFVMAGILYGFGSWLEC 464

Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A         +     +  I+  ++      GG+  +S +     I   +      +   
Sbjct: 465 ARMFGSGSAAYGQGWEMDAIAACVVGGVSFTGGIGKISGVVVGVFIFTALTYSLTILGID 524

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +       +  T 
Sbjct: 525 TNLQFVFSGIIILVAVTL 542


>gi|332283386|ref|YP_004415297.1| putative permease component of branched-chain amino acid transport
           system [Pusillimonas sp. T7-7]
 gi|330427339|gb|AEC18673.1| putative permease component of branched-chain amino acid transport
           system [Pusillimonas sp. T7-7]
          Length = 626

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 64/336 (19%), Positives = 135/336 (40%), Gaps = 34/336 (10%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           + L   ++    +A +  ++       + S  Y   +   +L+ V+FA  L  ++G  G+
Sbjct: 314 MPLRPANQAFKWMAAILLIIFLSLPLLSGSFPYAAVLAQDMLVAVLFAVSLHFMMGLGGM 373

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
            +      + IGAY+  +L    GL +   +  + + +G   M+ G   ++  G YLA+ 
Sbjct: 374 PTFGHAAYFGIGAYAAALLFKSLGLGMVASMLAAPLAAGLAAMVFGWFCIRLTGVYLAML 433

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL  ++I  +I+ +W  +T G  GI       +L                        YY
Sbjct: 434 TLAFAQIVWSIVYQWDDLTGGSNGIVGIWPEAWLSGD-------------------AYYY 474

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            +L +  L+  ++  +  +    A R +RD+     +    +   + +AF V+    G+A
Sbjct: 475 FVLAVVVLAVFVVRRMAFSPFGYALRAVRDSALRADASGIHVKGMQWAAFVVAGLLAGLA 534

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA +  S+   SP++    +++  + +V+LGG+ +L       A    + +   G+  Y+
Sbjct: 535 GALYVFSKGSTSPEVMTVGKSVDGLVMVLLGGIQTLFGPVAGAAAFTIMQDYFVGITEYW 594

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                            L    + L++L+    +  
Sbjct: 595 RA---------------LFGAVILLIVLVFPQGIAG 615



 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 103/306 (33%), Gaps = 18/306 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLL 95
           I +   +     + A GLS++ G   +++      Y +G   AY+ V L     +  WL 
Sbjct: 10  ILNGLAEASSLFLVAVGLSLIFGVSRIVNFAHGSLYMLGLYVAYTVVSLWGHSPVGFWLS 69

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  +A+I G  G ++ +  L+       +  L+ +     +         G   +     
Sbjct: 70  LICAALIVGVLGALIEIVLLRRIYHAPEMFQLLATFALVLVFNDMALWLWGPDDLLGPLA 129

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
               G                    ++   +++    +  ++ L L RT      R    
Sbjct: 130 PGLNG----------SIQIFNRYMPVYDLALIVIGPLILLALWLMLTRTRWGTLIRAATQ 179

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++   +L     +     FA+ +   G+ GA     +      M   S       +V++
Sbjct: 180 DREMLGALGVNQAWLFTGVFALGAFLAGLGGALQIPRQPA--SLMLDLSVIGDAFVVVVV 237

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S+     A  I+  +  LC  +       +     +F      +  I +  V++ +
Sbjct: 238 GGMGSIPGAYLAALIIAQLKALCITLG---VVDIAGISIAFPKLTLVVEFIFMAFVLVFK 294

Query: 336 SHSLLR 341
              LL 
Sbjct: 295 PWGLLG 300


>gi|222081838|ref|YP_002541203.1| urea or short-chain amide ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221726517|gb|ACM29606.1| urea or short-chain amide ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 349

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 46/335 (13%), Positives = 105/335 (31%), Gaps = 17/335 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +    ++      V   ++ + +   + + +            + +  L+ + G  G+LS
Sbjct: 1   MTPRLRLFAQSLAVLVAIIAVAIAPGQLELFTLMQFTLFAAMAVLSLSLAFIWGFGGILS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                 + +G Y Y I    +  S    I ++  I      ++G      R   + +  +
Sbjct: 61  FGQTAFFGLGGYVYAISAINFQDST-QGIMLALFIPAVFSALLGYFVFYGRISDVYLGVI 119

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++     IL      T+G         L               F  S  +     ++V 
Sbjct: 120 TLTVTL--ILFNVINSTSGDEYHIGTAMLGGFNGIPAVPTFNMPFDPSTPLSPEQSWWVT 177

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
            G       ++  +  +        +R+N+     L       KL AF +  A  G+AGA
Sbjct: 178 GGALIAVYLLLRLILASPFGRVVVAVRENEVRASLLGYDPRLIKLVAFVIGGAIAGLAGA 237

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +      + P +F  S +  +I  + +GG+ +L        ++                
Sbjct: 238 LYVNWGAFVGPTIFSLSLSAEIIIWITIGGLGTLLGPIIGCILI--------------EY 283

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           ++        +    ++   L   +L+    L+  
Sbjct: 284 AVAAIGSQQTLNSNLVLGAVLIFFVLLLPRGLVPT 318


>gi|23500394|ref|NP_699834.1| branched-chain amino acid ABC transporter permease [Brucella suis
           1330]
 gi|256015423|ref|YP_003105432.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella microti CCM 4915]
 gi|23464014|gb|AAN33839.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella suis 1330]
 gi|255998083|gb|ACU49770.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella microti CCM 4915]
          Length = 328

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 115/327 (35%), Gaps = 27/327 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
              +    ++   +          ++  +I+   +    L +V G  G+ +L     +  
Sbjct: 16  AGLIGIVAIIAASVVGWFLFPDNLALLTRIIAIALLVLSLDLVTGYCGIATLGHAALFGA 75

Query: 77  GAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GAY   I  + +      L+  +  +     G++ G   L+  G    + ++ +  +F  
Sbjct: 76  GAYGAGIAAAHFGVTDPILMTVIGLLAGAVTGLVSGAVILRATGLAQLVLSIAVVHLFHE 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
              K    T G  G+         G               F +Y   +Y   + +  +S 
Sbjct: 136 AANKASGWTGGSDGLSGISPDPIFGI------------FEFDLYGRTVYIYAVILLLISF 183

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             + ++ R+      R ++++     ++  ++  A+L  + +S A  G+ GA  A S   
Sbjct: 184 IFLRYVVRSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISGAVAGIGGALNAISTQV 243

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +  D   F+ +   + +++LGG  SL      T + +   ++    N +++         
Sbjct: 244 VGLDSLSFTMSAEALVMLVLGGAGSLFGGLVGTVVFMWFEDVVSTANPFHW--------- 294

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                 T++   L  V+L     L   
Sbjct: 295 -----LTMVGALLIAVVLFAPRGLYGT 316


>gi|312197949|ref|YP_004018010.1| inner-membrane translocator [Frankia sp. EuI1c]
 gi|311229285|gb|ADP82140.1| inner-membrane translocator [Frankia sp. EuI1c]
          Length = 952

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 54/316 (17%), Positives = 119/316 (37%), Gaps = 19/316 (6%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
               L    +     +  I   I  +    L +V G  G +SL  +      A+S   L 
Sbjct: 333 AVGVLALVGTHGTWRAAVISTFIAAVIGLSLVVVTGYAGQVSLAQLALAGAAAFSLSGLT 392

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
             + +   +   ++A+++   G+++GLP+L+ RG  L + TL ++   + +  +     +
Sbjct: 393 QSWHVPFPIAPLLAALVATVLGVLVGLPALRLRGLTLGVVTLALAYAIEALWFRNTDFVS 452

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                    RL+ L   + +   F R     V   + +           A  +  LR + 
Sbjct: 453 SAGNKVRPPRLFGLDLGIGTGHAFPRIQFGLVCLVVLV---------AVAWGVARLRTSR 503

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           + +A   +R N+++   +   ++  K+ +FA++S   G+ G+  A  R  ++ D F    
Sbjct: 504 LGSAMLAVRANERSAAGIGINVVRVKVVSFALASFIAGLGGSLLAYRRGVVTYDSFTAIG 563

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
            + ++S   L G+TS+     A  +    +       + +                 L  
Sbjct: 564 GLSLLSTAYLAGVTSVFGGVNAGILAGSGIVFVATDRWIHLGDWFP----------VLSG 613

Query: 326 IALFLVILMRSHSLLR 341
           +A+  V++     +  
Sbjct: 614 LAVIAVLIGHPEGVAS 629



 Score = 38.7 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 70/239 (29%), Gaps = 7/239 (2%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G+++          AY+Y  L     L I    P S  I G  G++  +      G  L
Sbjct: 31  SGVINFATGAVALYVAYAYAFLRQGELLIIIPGPPTSVGIGGDPGLVPAVLIALVFGALL 90

Query: 123 AIATLIMSEIFQNILIKWKPITNG-----KAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
            +   ++                           +A RL     +V ++    R+    V
Sbjct: 91  GVLLYLLVFRPLREAPPLARAVASLGVLVVIQSAMAIRLGTAPVSVDAIFPASRWRLGSV 150

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                 +Y+ + +  L+ ++    R T      R   ++    +    +     L  + +
Sbjct: 151 TLLSDRFYLAVTVVALTLALTAVFRFTRFGLTTRAAAESATGAYVSGASPDRIALLNWMI 210

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           S    G AG   A                +  ++  ++GG   L     A   +  +  
Sbjct: 211 SGVVAGAAGILIAPLSPLAPTT--YTLFVVPALAAAVVGGFQHLVPTVGAGLAIGMLQS 267


>gi|254461547|ref|ZP_05074963.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2083]
 gi|206678136|gb|EDZ42623.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 619

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 62/324 (19%), Positives = 120/324 (37%), Gaps = 34/324 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V   L  L L       +I  +   I I+ +FA  L  ++G  GL+S      +  GA
Sbjct: 313 MIVMLGLGLLALLPLVGDSFIQVLITDIAIFCLFAASLHFLLGLGGLVSFGHAAYFGGGA 372

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L +  G  + L + ++ + +G   +I G   L+  G Y A+ TL  +++  +++ 
Sbjct: 373 YAAALLVTYAGTPMELALILAPLAAGLTAIIFGWVCLRLTGVYFAMLTLAFAQLLWSLVF 432

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +W   T G  G+       +                         YY+ L +C     I+
Sbjct: 433 QWGDFTGGDDGLVDIWPSEW------------------ASGTTTFYYLALVLCIGGIIIL 474

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
                +    A R  RD+ +   +        +  AF  + A  G+AG  F  S+  I P
Sbjct: 475 RHTAHSPFGYALRGARDSARQAEATGINTKHVQWVAFGFAGAMAGIAGGLFVFSKGSIFP 534

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           +  + + +   + +V LGG+ +L+      A L G  +                      
Sbjct: 535 NELEIARSFDALIVVFLGGVKTLAGGVVGGAALEGAKDYITRF----------------E 578

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
               L+ + +  V+++    +   
Sbjct: 579 YWRLLLGLLIIFVVILAPDGIAGT 602



 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 94/308 (30%), Gaps = 28/308 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96
           I +         M A GLS++ G   +++      Y +GAY     +         W  I
Sbjct: 8   ILTGLANASALFMVASGLSLIFGVTRIVNFAHGSFYMLGAYVGYSFMQVLPGAWGFWTSI 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ +I G  G+++ +  L+       +  L+ +     ++     +  G          
Sbjct: 68  LLAGLIVGLIGIVVEMLVLRPVYKAPELFQLVATFGVILVIQDLTLLVWGADDFLGPRAP 127

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G                     +   ++    F++ ++   + +T      R    +
Sbjct: 128 GLKGI----------IRIMGEPIPKYDLALIALTPFVAFALWWLITKTRTGILVRAATQD 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +L     +     F +  A  G+ GA            +  F+    +  +V++G
Sbjct: 178 REMVGALGVNQAWLFTGVFFLGCALAGLGGAVQLPKGGA--DLLMDFNILSAIFVVVVIG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM SL     A  ++  +                            LM + + +V++ R 
Sbjct: 236 GMGSLPGAYVAAVLISVLNVFGVNY--------------LPQSTLALMFVVMVVVLIFRP 281

Query: 337 HSLLRLRT 344
             L     
Sbjct: 282 FGLFGREE 289


>gi|158425511|ref|YP_001526803.1| inner-membrane translocator [Azorhizobium caulinodans ORS 571]
 gi|158332400|dbj|BAF89885.1| inner-membrane translocator [Azorhizobium caulinodans ORS 571]
          Length = 351

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 56/319 (17%), Positives = 106/319 (33%), Gaps = 3/319 (0%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
              +L         +  Y     +    +V  A GLS++ G  G LS      + I  Y 
Sbjct: 25  FLLVLAAACAYPLFADGYTVGNTVYFFTWVFMALGLSVIWGYCGALSFGQTAFFGIAGYG 84

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE-IFQNILIK 139
           Y IL   +G +    +    +      +   L         +A   L +       +L +
Sbjct: 85  YGILTINFGSAYGFTLIALVIAVALACLFAALLGYFLFYGRIAGVFLGIVTLSVTLVLER 144

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE--IFMYYVLLGMCFLSASI 197
           +   T G      A RL               +P   V+    + +YYV+LG+  L    
Sbjct: 145 FMAQTAGPEWRIGAARLNGFNGMSNMPQLTIPWPGGDVVLFPDVELYYVVLGLMVLVYLA 204

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  +   N    IR+N +    L   +   +L AF + +A  G++G  +      I+
Sbjct: 205 LRILLNSRFGNVIVAIRENPERAEMLGYDVRRYQLVAFVIGAALAGLSGVLYTTWGQYIT 264

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P     +   + I  V +GG + ++     T  ++   +        Y   ++       
Sbjct: 265 PSSMGMTAAALPIVWVAVGGRSDITTTLVGTLAVLSGFQTLTIYGSQYALVVMGLLLVVT 324

Query: 318 MRHTTLMVIALFLVILMRS 336
           +      ++     +L R 
Sbjct: 325 VLAAPRGLVMALADVLARP 343


>gi|34557812|ref|NP_907627.1| ABC transporter permease [Wolinella succinogenes DSM 1740]
 gi|34483530|emb|CAE10527.1| ABC TRANSPORT SYSTEM PERMEASE PROTEIN [Wolinella succinogenes]
          Length = 300

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 50/291 (17%), Positives = 93/291 (31%), Gaps = 11/291 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++        +GA+      S + L  W    +
Sbjct: 11  LINGVSLGSMYALIAIGYTMVYGVLRLINFAHADVMMVGAFLVFFGVSSFALPFWAAALL 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S + S   G+++   + K   +   I+ LI +      L     +  G          +F
Sbjct: 71  SILFSALLGVVIDKIAYKPLRNAPRISMLITAIGVSFFLENIFNVFFGSTPKSFEAPAFF 130

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T             S ++       V L    L   ++  L RT    A R +  +  
Sbjct: 131 NET----------LSLSHLVLTHIALIVPLVTLLLLGILLYVLYRTKQGMAIRAVAFDVN 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           F + SA   + G F+A S   I P M      +   +  +LGG+
Sbjct: 181 TVRLMGVDANQIISIVFIMGSALAAVGGIFYAISYPTIDPLM-GVLIGLKAFAAAVLGGI 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            S++       IL     +   +          F   F +       + + 
Sbjct: 240 GSVTGAVLGGFILGFTEVVVVALFPELSGYKDAFAFLFLILVLLFRPVGIM 290


>gi|222084830|ref|YP_002543359.1| branched-chain amino acid ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221722278|gb|ACM25434.1| branched-chain amino acid ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 329

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 60/310 (19%), Positives = 122/310 (39%), Gaps = 29/310 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS      +   AY        +GL   L I +   
Sbjct: 42  FVMKVLCFALFACAFNLLLGYTGLLSFGHATFFGGAAYFTAHAVKEWGLPPELGILIGVG 101

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G+IMG  +++ +G Y ++ TL +S +F    ++ +                    
Sbjct: 102 GAALLGLIMGFVAIRRQGIYFSMITLALSYMFYFFCLQAEFTKG--------------ED 147

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++S+ R +      +     MYY +L +  +S  II     +      ++IR+N++   
Sbjct: 148 GIQSVPRGYLLGILDLNNAFNMYYFVLAVFIISVLIIWRFINSPFGMILKSIRENEQRAI 207

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL  ++   KL AF +S+A  G+AGA  A      +     +  +  VI + +LGG+ +L
Sbjct: 208 SLGYSVARYKLGAFVMSAALAGLAGAVKALVFQFATLTDVAWQMSGEVILMTLLGGIGTL 267

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   ++  +       +F                 T +  I   + +L+    ++ 
Sbjct: 268 IGPLFGAGLVATLENYLATSDFPV---------------TIITGIVFMVCVLLFRRGIIG 312

Query: 342 LRTPSNFLER 351
               S    +
Sbjct: 313 EFYASRLGRK 322


>gi|282857801|ref|ZP_06267009.1| inner-membrane translocator [Pyramidobacter piscolens W5455]
 gi|282584362|gb|EFB89722.1| inner-membrane translocator [Pyramidobacter piscolens W5455]
          Length = 293

 Score = 76.4 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 92/306 (30%), Gaps = 23/306 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +  S      IY + A G S+V G   +L+        +GAY       R+ L     +
Sbjct: 5   NFFISGISLGSIYAIIALGYSMVYGIAKMLNFAHGDVIMVGAYVCFYAVFRFHLPALAGV 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +  +    G+++   + K      ++A LI +      L     +            +
Sbjct: 65  AFAVTVCTLLGIVVEKLAYKPLRQAPSLAVLITAIGVSYFLQNTALLLWTSNPKVFPSVV 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +             +         ++    +  ++  ++ RT +  A R   ++
Sbjct: 125 GRGAVQLFG---------GQLSISHVTIVTIVSCLVIMTALSWFVGRTRMGKAMRACSED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ S    +AG    ++   +          I   +  + G
Sbjct: 176 KGAALLMGINVNATISLTFAIGSGLAAVAGVLLCSAYPTL-MPTTGSLPGIKAFTAAVFG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        +L  +            +               ++   L +V+L++ 
Sbjct: 235 GIGSIPGAFLGGLLLGVIEIFAKAYISTQLSDA-------------VVFAVLIVVLLVKP 281

Query: 337 HSLLRL 342
             LL  
Sbjct: 282 AGLLGR 287


>gi|55377440|ref|YP_135290.1| branched-chain amino acid ABC transporter permease [Haloarcula
           marismortui ATCC 43049]
 gi|55230165|gb|AAV45584.1| branched-chain amino acid ABC transporter permease protein
           [Haloarcula marismortui ATCC 43049]
          Length = 373

 Score = 76.4 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 60/342 (17%), Positives = 109/342 (31%), Gaps = 42/342 (12%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS------RYGLSIWLLI 96
            + +L + +FA     + G  G LS    + Y  GAY+ +++ +        G    L +
Sbjct: 9   MVGVLYFGLFAISFDFISGYTGYLSFGHAVFYGTGAYTVILIANGKLPLLGPGTPFMLSL 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V  +I+    M++GL S +  G Y A+ TL  +++F   +  W  +             
Sbjct: 69  LVGGLIAVVLAMLVGLVSFRLSGVYFAMITLGFAQVFYVFVRGWDYVATNPRDGPAVGPS 128

Query: 157 YFLGTTVRSLIRFF-------------RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
           +  G  +                        S +      YY++  +       +  +  
Sbjct: 129 HAEGFQIGVPGIDQLSLSIGVLTGDEVALLGSTLSGTEVSYYMIGLVVLACYFAMQRIIH 188

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFK 262
           +        IR+N++   ++       KL AFA+S  F  +AG  FA  +   SP+  F 
Sbjct: 189 SPFGRVMLAIRENEERAVAIGYNTYLYKLGAFAISGFFAAVAGGLFAGFKRSASPENSFY 248

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAI----------------------LIGVVELCCG 300
           F      +   I+GG  +L+                               +   E    
Sbjct: 249 FLVTGDALLASIIGGFGTLAGSLYGHLFDETVREFLSKAGQGGGLLPYLRALLGQETLDA 308

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                       D   N   +  + I   L +L     LL  
Sbjct: 309 TLVGETTIGGLIDLLLNGHASLYVGIVFVLFVLYVPDGLLGT 350


>gi|222086824|ref|YP_002545358.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221724272|gb|ACM27428.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 300

 Score = 76.4 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 90/304 (29%), Gaps = 17/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G +G+++      + +G ++ +I           L   
Sbjct: 8   LLNGLTLGSIYGLIAIGYTMVYGIVGMINFAHGDVFMLGGFAALITYLVLVSFFAGLPVA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      ++      +  + +A   L  S     ++            I VA     
Sbjct: 68  VLLLVMLIVAMLMTSLWNWVIERIAYRPLRGSFRLAPLITAIGMSIVLSNFIQVAQGPRN 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +    +    V   +    + +    L A+    + +TA+  A R    ++K
Sbjct: 128 KPI---PTLVGDVYNFDGVSLSLKQIIIFVITVVLLAAFWYLVNKTALGRAQRATEQDRK 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       F + +A   +AG  +       +     F+  +   +  +LGG+
Sbjct: 185 MAALLGINVDRTISVTFIMGAALAAVAGTMYLMYYGVANFTD-GFTPGVKAFTAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        ++  +                                 L  V++ +   
Sbjct: 244 GSLPGAVLGGLMIGFIES-------------FWSGNFAIAYKDVATYAILAYVLIFKPTG 290

Query: 339 LLRL 342
           +L  
Sbjct: 291 ILGR 294


>gi|317403038|gb|EFV83575.1| hypothetical protein HMPREF0005_02993 [Achromobacter xylosoxidans
           C54]
          Length = 329

 Score = 76.4 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 66/327 (20%), Positives = 131/327 (40%), Gaps = 26/327 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +   +    L   +    +  +   + +  +++       ++V G LG +S    +  
Sbjct: 17  WPVAVALAAAALLALVPLVVTDSFTLQVLLLAIMFGALGACWNLVGGFLGRISFGHAVFV 76

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G Y+ ++L     L+  L IP+  +IS A   ++G P+L+  G Y A+AT+ + +I  
Sbjct: 77  GVGGYTTLLLLHHLKLTPLLGIPLGGLISAALAWLVGGPTLRLSGHYFAMATIALLQIGL 136

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++I W                 ++                    ++  Y++ +G+ FL+
Sbjct: 137 LLMINWDWAGGAVGLEAPIGDAAWMLLFRS---------------KVPYYWIAVGLAFLT 181

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                +L  +     WR I  ++ A  SL       K+ AF +S+   G+ G FFA    
Sbjct: 182 FCATYFLVHSKTGFYWRAINGDEAASRSLGVPADRYKMLAFVLSAGMTGVWGGFFAMYVG 241

Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
            I P+ MF  + ++ V+ + ILGG+ +L       A+L+ + E    +          + 
Sbjct: 242 FIDPESMFSLTMSVQVVLVAILGGVGTLVGPWLGAAVLLPLSEGTRVL----------WG 291

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLL 340
            S       +  +A+ LV L     L+
Sbjct: 292 SSGLGLDLLIFGLAILLVTLFLPGGLV 318


>gi|311103675|ref|YP_003976528.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310758364|gb|ADP13813.1| inner-membrane translocator 4 [Achromobacter xylosoxidans A8]
          Length = 304

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 99/308 (32%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +  M A GL+++ G +G+++L     Y +GAY                   
Sbjct: 8   LLNGLQFGAMLFMLAAGLTLIFGIMGVVNLTHGSFYMVGAYCAAYAIG----------TT 57

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            + ++G    ++G        + L I  L   +    +L  +  +      + +      
Sbjct: 58  GSFLAGVLAALLGAGLYGISVEVLVIRKLYKRDHLYQVLATFGLLLFSNEAVSLIFGRRP 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + S +      +    Y +     +     ++  +   + RT I    R   D+++
Sbjct: 118 PLVGIPSFLEGAVTLAPGFQYPLIRLSFIAIGALVAVGLWWLVNRTRIGMLIRAGADDRE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       F + +   G+AG   A                I    ++++GG+
Sbjct: 178 MVDALGIDIRKLYTLVFGLGALLCGLAGVMAAPLLAV--EIGMGERILITTFVVIVIGGV 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL---MVIALFLVILMR 335
            S+        ++  V  L         +++     +  +        + + + +V++ +
Sbjct: 236 GSVRGALAGALLVGMVDSLGRAFLPQLLSTMFSPATADPLAAGMASASIYVLMAIVLIAK 295

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 296 PGGLFPAR 303


>gi|300696580|ref|YP_003747241.1| high-affinity branched-chain leucine/isoleucine/valine transporter
           subunit protein (ABC superfamily, membrane) [Ralstonia
           solanacearum CFBP2957]
 gi|299073304|emb|CBJ52813.1| high-affinity branched-chain leucine/isoleucine/valine transporter
           subunit protein (ABC superfamily, membrane) [Ralstonia
           solanacearum CFBP2957]
          Length = 293

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 111/303 (36%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y +FA G ++V G LG+++L+    + +GAY+ + + +++ L +W  + V
Sbjct: 6   LVNALSLGCVYALFALGFTLVFGILGVINLSHGAVFMLGAYAALQIVTQFELPLWAALAV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++SG  G+I+ +         L       +      +I                    
Sbjct: 66  GFVVSGVAGLIIDVL--------LLRPLRRRNAPHLIPMIATIGAGIAINNAMQGVFGAE 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L+         V        +++    L A+++L L+RT +  A R I ++ K
Sbjct: 118 NLRFPAGLVSDASLDLGGVHLTPLELGIIVLSFVLMAALMLLLKRTQLGRALRAIAESPK 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +    L     ++A  G++G       + + P M +   +  + +++ILGG+
Sbjct: 178 AAALLGINVEGLFLLTSFAAAALGGLSGVLIGLYSNAVFPLMGQPMLHKGI-AVIILGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +         L     L            + F               LFL++L+R   
Sbjct: 237 GDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG-------------LLFLILLVRPQG 283

Query: 339 LLR 341
           L  
Sbjct: 284 LFG 286


>gi|218674287|ref|ZP_03523956.1| putative branched-chain amino acid ABC transporter, permease
           protein [Rhizobium etli GR56]
          Length = 397

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 57/329 (17%), Positives = 109/329 (33%), Gaps = 34/329 (10%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           LL     + +   L       Y  S    I  +V+ A    I+ G  G  S      + I
Sbjct: 6   LLITAPVVAILASLPYLGMADYYLSYLYIIFFWVVLATSWGILSGYTGYWSFGHAAFFGI 65

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK---FRGDYLAIATLIMSEIF 133
           G Y+   L ++        IP +A+++    +++GL   +    RG++ A+ TL ++ + 
Sbjct: 66  GVYTTATLTTQLSWPFVATIPAAALLAAVVAVLIGLVVFRSGALRGEFFALLTLSVTFVV 125

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             I+      +                      +     P         +Y        +
Sbjct: 126 AAIVSNTALDSG-----------------TGVFLSGIEIPMIGATASGSLYMFGFIAALV 168

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           + +   ++  +        I D++             KL +FAVSSA  G  GA  A   
Sbjct: 169 ALATSYFIFHSKFGQGLLAIHDDEDVAEVKGVPTFRYKLISFAVSSALAGAMGAIHAVYV 228

Query: 254 DRISP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
             ++  + F  +  + V+ + ILGG    +  A    I+  +           F      
Sbjct: 229 GYVTVGETFAVTVPLYVVLMSILGGARHWAGPAIGAVIITVMQSAIVSGAHAEFGRAG-- 286

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                      + +AL +VIL+    ++ 
Sbjct: 287 -----------VALALIVVILVLPSGIVP 304


>gi|39937461|ref|NP_949737.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009]
 gi|39651320|emb|CAE29842.1| possible branched-chain amino acid ABC transporter, permease
           protein [Rhodopseudomonas palustris CGA009]
          Length = 355

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 47/338 (13%), Positives = 112/338 (33%), Gaps = 14/338 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L ++  +++              ++  +I I+        +++G  G +S    + Y
Sbjct: 13  VLSLLLITIVVVLAITPFVFPGAKPLNVAAKICIFAALVASYDLLLGYTGTVSFAHTMFY 72

Query: 75  AIGAYSYVILGSRYGLSIW---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
            IG+Y+  I     G S       + +   ++    +++GL SL+    + A+ TL ++ 
Sbjct: 73  GIGSYAVAIALYGMGPSWAAVGAGVLIGLPLAALLALVIGLFSLRVEAIFFAMITLAVAS 132

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            F  +  +   +T G+ G   +             +    F    +   I  YY++L  C
Sbjct: 133 AFLVLASQLSWLTGGEDGRSFSLP----ELLRPGTVFVKDFFGVRINGRILTYYIILVGC 188

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                 +L +  +      + +R+N+    +L    +F    A  +++     AG   A 
Sbjct: 189 AGMILALLRVVNSPFGRVLQAVRENRFRAEALGYRTVFHLTYANVLAALVAAAAGVLNAM 248

Query: 252 SRDRI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                       FS  + ++ +V++GGM ++        I I        +      +  
Sbjct: 249 WLRYAGPDTSLSFSIMLDILLMVVIGGMGTIYGAIIGATIFILAQNYLQALMGAASGAAA 308

Query: 311 KFDCSFNMR------HTTLMVIALFLVILMRSHSLLRL 342
                              + +     +      ++  
Sbjct: 309 DAGLPLLPNLLHPDRWLLWLGLLFVASVYFFPTGIVGR 346


>gi|120403579|ref|YP_953408.1| inner-membrane translocator [Mycobacterium vanbaalenii PYR-1]
 gi|119956397|gb|ABM13402.1| urea ABC transporter membrane protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 370

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 47/336 (13%), Positives = 100/336 (29%), Gaps = 29/336 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
              L+   +       +  S+  + L + + A G+ +  G  G+L L   + + +G Y  
Sbjct: 16  AAALVLFVVAPAVLSDFRLSLLGKFLCFAIVAVGIGLAWGRGGMLVLGQGVFFGLGGYMM 75

Query: 82  VILGSRYGLSI---------------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            +        +                L    +   S    +I  +         L +  
Sbjct: 76  AMHLKIADAQLRGDEVPDFMQIQGIRELPGYWAPFASPLVTLIAIVVVPTGIAAALGLGV 135

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
                      I  + +    A + V          +     FF F  +  +    +Y++
Sbjct: 136 FKRKVKGAYFAILSQALAAALAILLVGQTSLGGSNGLNRFRTFFGFALNDPVNRRMLYFI 195

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
              +  +  +++  L ++        +RD ++    L       K+ A+A ++ F  +AG
Sbjct: 196 AAAVLLVVVAVVRQLMQSRYGELLVAVRDGEERVRFLGYDPANIKVVAYAAAALFASIAG 255

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A FA     I+P       +I  +  V +GG T+L         +     L        +
Sbjct: 256 ALFAPIVGFIAPSQVGILPSIAFLIGVAIGGRTTLLGPVLGAIGVAWAQTLFSERFPSEW 315

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                              +   +V+      L  L
Sbjct: 316 TYAQ--------------GLLFIVVVGFFPAGLAGL 337


>gi|330949946|gb|EGH50206.1| inner-membrane translocator [Pseudomonas syringae Cit 7]
          Length = 307

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 95/297 (31%), Gaps = 16/297 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91
           + +       Y + A G ++V G +G+++      Y IG+Y   +  +   +        
Sbjct: 11  LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70

Query: 92  -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +      + +++ A G  +   + +   +   +  LI +      L     ++ G    
Sbjct: 71  LMIAGFAAAIIVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNF 130

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            + + L          + F    +  V+       V L        + L++ R+ +  A 
Sbjct: 131 AIPNLL-------PGSLSFGPGGAEEVLISYMQIVVFLVTLVAMTGLTLFISRSRMGRAC 183

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F V +A   +A    +     I+P+   F   +   
Sbjct: 184 RACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVINPNA-GFLVGLKAF 242

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  +LGG+ S+        +L         +    +  ++ F     +       I 
Sbjct: 243 TAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299


>gi|328880632|emb|CCA53871.1| branched amino acid transport system ATP-binding protein
           [Streptomyces venezuelae ATCC 10712]
          Length = 912

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 99/283 (34%), Gaps = 16/283 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A +   LL      T +  +   +  Q L   +     ++V G   ++SL         A
Sbjct: 330 AWIVAALLLGTAFYTVTTPFWSGILAQGLAIGLVFMSFTVVTGLGAMVSLAQATFVTGAA 389

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               +L S                +   G ++ LP+L+  G  LA+ATL ++ +   +L 
Sbjct: 390 LVAGLLMSHGWP-FVAAAAAGTAAAALLGAVVALPALRLGGRSLALATLALAFLADQVLF 448

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +  P+ NG  G  +   +                              L+ +  +  +++
Sbjct: 449 QLGPLRNGDTGWEIPRPVAGPVDLSDDRAMG---------------LALVLLSCVLVALL 493

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             LR +    A   +R   +A  +   +++  KL  F VS+   G  G  +A+   RI+ 
Sbjct: 494 TRLRGSRWGRAMLAVRSAPEAAAASGVSVVRTKLLLFTVSAGLAGFGGVLYASYNTRITA 553

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
             F     ++ +++V+  G+        A  +   V  L    
Sbjct: 554 TDFTAMTGLVWLAVVVAAGVRRPQFAVVAGLVFAVVPHLMATY 596



 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 85/303 (28%), Gaps = 11/303 (3%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLI 96
           ++ S  +   +Y + A GL +   + GL +        + A ++  +       ++   +
Sbjct: 7   FVLSGLVSGALYALLATGLVLSYSASGLFNFAHGATAYLCALAFYELHSGFGWPAVPTAL 66

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL----IKWKPITNGKAGIYV 152
            +  +++   G  +     +        A ++ +      L    +    +        +
Sbjct: 67  LLVTVVAPGLGWGLDRLMFRKLAKAGETAQIVATIGLLVALPAAGLWVVELLERAGAPVL 126

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                F    V         P   V  +       +     +A + + +R T +    R 
Sbjct: 127 PAENQFGLPGVGPSPAVSWQPLDGVGIDSDQLITWIVTALTAAGLWILMRHTRLGLRLRA 186

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
             DN+                A+ +SS   G+AG          + D        +  + 
Sbjct: 187 AVDNRALTELRGIGADRLSSIAWMLSSGLAGLAGVLATPLLGLSAHD--YTLFLFVSATA 244

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            +LG   S+         L  +  L  G   +                  ++   L ++ 
Sbjct: 245 AVLGRFASVPLAFAGGLGLGVLQNLVAGYASF----AEGVTGFRTAVPFLILFAGLVVLA 300

Query: 333 LMR 335
             R
Sbjct: 301 RRR 303


>gi|312141165|ref|YP_004008501.1| branched-chain amino acid ABC transporter transmembrane protein
           [Rhodococcus equi 103S]
 gi|311890504|emb|CBH49822.1| putative branched-chain amino acid ABC transporter integral
           membrane subunit [Rhodococcus equi 103S]
          Length = 363

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 49/351 (13%), Positives = 104/351 (29%), Gaps = 29/351 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             +      ++   +       +  ++  + L + + A G+ +  G  G+L+L   + + 
Sbjct: 9   VWVGFAVAAVVLFGVAPAMLSDFRLNLLAKFLCFAIVAVGIGLAWGRGGMLTLGQGVFFG 68

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY   +        +        M       +    +          A L++      
Sbjct: 69  LGAYIMAMHLKIADAELRGDSVPDFMQIAGIRELPSYWTPFTDPFTTIAAILLVPAFVAF 128

Query: 136 IL---------------IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           +L               I  + +    A + +  +       +     FF F  S    +
Sbjct: 129 LLGLGVFKRRVKGAYFAILSQALAAAFAILLIGQQSIGGSNGLNRFRTFFGFNLSDPANK 188

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             ++++   +  L  +    L  +        +RD ++    L       K+ A+ V++ 
Sbjct: 189 RMLFFIAAAVLLLVVAATRQLMNSRYGELLVAVRDQEERVRFLGYDPANIKVVAYTVAAF 248

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           F G+AGA F      ISP       +I  +  V +GG T+L         +         
Sbjct: 249 FAGIAGALFVPIVGIISPADVGIVPSIAFLIGVAIGGRTTLLGPVLGAIGVAWAQTTLSE 308

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                         +F    T    +   +VI      +  L        R
Sbjct: 309 --------------NFPSAWTYAQGLLFIVVIGFFPAGIAGLAKLFGRRRR 345


>gi|284164602|ref|YP_003402881.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511]
 gi|284014257|gb|ADB60208.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511]
          Length = 372

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 60/280 (21%), Positives = 112/280 (40%), Gaps = 23/280 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           + + A               I+ +FA G  I  G  G +S       A   Y+  +L   
Sbjct: 74  VPMWAPLFVGNYMRTLAVACIWSIFAMGWDIQSGYTGYISFGHSALSAAAGYTTALLAVN 133

Query: 88  --YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
                S W+ IPVS + +   G+++GLPSL+  G Y ++ T +   +F  + I +     
Sbjct: 134 LSPVPSFWVTIPVSILAALVLGLLIGLPSLRLSGPYFSLVTFVAVLLFYRLTIGFSETLG 193

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G+ G    +   +  T                      YY++L    L A+ +  + R+ 
Sbjct: 194 GENGFQAVEVFTWDFTE--------------------RYYLMLVPMLLVAAALTVVARSN 233

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +      IR+N++A  +        KL +FA+SS  +G+ G   A     + P  F   +
Sbjct: 234 VGTVLVAIRENERAVSAAGLDPTKFKLWSFALSSITMGIGGVLLAHFGGNVDPTTFVVVD 293

Query: 266 N-IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
             I +I++ ++GGM+S+        + + + +    + F 
Sbjct: 294 RSIEMIAMAVIGGMSSVLGPIGGAFLFVLLRDEILRLWFG 333


>gi|289577847|ref|YP_003476474.1| inner-membrane translocator [Thermoanaerobacter italicus Ab9]
 gi|289527560|gb|ADD01912.1| inner-membrane translocator [Thermoanaerobacter italicus Ab9]
          Length = 294

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 95/303 (31%), Gaps = 23/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GA++ +       +S    +  
Sbjct: 8   LINGISVGSIYALIALGYTMVYGIIKLINFAHGDVYMLGAFAGLYATLVLKMSFVPALIF 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++    G+I+   + +   +   I  LI +      L        G       +    
Sbjct: 68  SMIVCAILGIIIERLAYRPLRNSPKIVILITAIGVSLFLEYTTMFFLGPQPRAFPEIFKH 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                      +      V        +++    L   +   +  T I  A R +  + +
Sbjct: 128 AS---------YTLLGGKVTISNQEILIIVVTIILMILLQYIVHNTKIGKAMRAVSYDMQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA    AG       +++ P M      +      +LGG+
Sbjct: 179 AARLMGINVDTTISITFALGSALAAAAGVLVGIYYNKVFPLM-GIMFGLKAFVSAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        IL     L  G     +   + F             + L +++L++   
Sbjct: 238 GIIPGAMAGGFILGITESLVSGYGSSLYRDPVAF-------------VILIIILLVKPSG 284

Query: 339 LLR 341
           L  
Sbjct: 285 LFG 287


>gi|160895670|ref|YP_001561252.1| urea ABC transporter permease UrtB [Delftia acidovorans SPH-1]
 gi|160361254|gb|ABX32867.1| urea ABC transporter, permease protein UrtB [Delftia acidovorans
           SPH-1]
          Length = 304

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 91/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++   GL+I+ G +G++++       IGAY+  +  +        L+P    +
Sbjct: 18  LSLFAVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTIYLGSTLTAQHAPELMPYYFPL 77

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     +    +       L     +       +L  W      +           +  T
Sbjct: 78  AIVAAFLFAFAAGWLVEWGL--IRHLYKRPLDTLLATWGVSLALQQCFRTFIGPKEVSPT 135

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P+  +   I   +VL     ++A +++ L ++      R    N+    +
Sbjct: 136 LPDWLMGSWAPAEGLDIPINGLFVLALTAVVTAGVLIALHKSRWGLRVRATVSNRVMANA 195

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           FA+     G+AGA  A +    +         +    +V  GG  SL 
Sbjct: 196 IGIDTKKTDRLTFAIGCGIAGVAGA--AFTTIGSTGPTSGSLYIVDAFLVVTFGGAASLL 253

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     +           ++                 +  ++++R   L   
Sbjct: 254 GTVVSAFGIAQTQSITEFFLAGSMAKVITLS-------------LIVFILMLRPQGLFAS 300

Query: 343 R 343
           +
Sbjct: 301 K 301


>gi|121607849|ref|YP_995656.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121552489|gb|ABM56638.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 629

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 54/312 (17%), Positives = 119/312 (38%), Gaps = 34/312 (10%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
                   Y+  + I +LI  +FA  L  ++G  G+ S      + +       L  R G
Sbjct: 337 PLFAAGSPYLTVLMIDLLIAALFAASLHFIMGPAGMHSFGHAAYFGL-GAYAAALLLRAG 395

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L++   + ++ + + A  ++ G   ++  G YLA+ TL  ++I   I  +W  +T G  G
Sbjct: 396 LAMEAALALAPVAAAAGALLYGWFCVRLSGVYLAMLTLAFAQITWAICYQWDGVTGGSNG 455

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +       +                  +  +   YY+ L +      ++  +       A
Sbjct: 456 LTGVWPAPW------------------LAGQRSYYYLTLALVVAGLLLLRRMLFAPFGYA 497

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R  RD+     ++   +   + +AF ++  + G++GA FA S+  ISP+      ++  
Sbjct: 498 LRAGRDSALRAEAIGIDVRRLQWTAFVIAGLWAGLSGALFAFSKGSISPETLHVVRSVDG 557

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           + +V+LGG+ +L+           + +       Y+                 L+   + 
Sbjct: 558 LVMVLLGGLQTLAGPVVGAVTFTWLHDTVARNTDYWRA---------------LLGAIML 602

Query: 330 LVILMRSHSLLR 341
            ++L+    ++ 
Sbjct: 603 ALVLLFPQGIVG 614



 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 97/304 (31%), Gaps = 13/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +         + + GLS++ G   +++      + +G +    L +  G  +     +
Sbjct: 10  LLNGLAGASSLFLVSAGLSLIFGVTRIVNFAHGSFFMLGIFMAYSLAALLGQRLGFWPAL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                    +   +  L  R  Y A     +   F  +LI    +        +      
Sbjct: 70  LLAALATGALGALVEVLLLRRIYRAPELFQLLATFALVLIIKDAV--------LWFWGPE 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                R+             +  +  ++++    +   + L L RT      R    +++
Sbjct: 122 ELLGPRAPGLSGAVDILGRQFPSYDLFLIVVGPVVLGLLWLLLERTRWGTLVRAATHDRE 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L         + FA+ +   G+ GA                +       +V++GGM
Sbjct: 182 MLGALGVRQARLFTAVFALGALLAGLGGALQLPREPA--TLDLDLNTIGAAFVVVVVGGM 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++  +  LC  +       L  +  SF+     +  + + +V+++R   
Sbjct: 240 GSIPGAYLAALLIAELKALCIWLG---VVELWGYSVSFSRLTLVVEFLVMAVVLVLRPWG 296

Query: 339 LLRL 342
           L+  
Sbjct: 297 LMGR 300


>gi|320325674|gb|EFW81736.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas syringae pv. glycinea str. B076]
          Length = 307

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 94/297 (31%), Gaps = 16/297 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91
           + +       Y + A G ++V G +G+++      Y IG+Y   +  +   +        
Sbjct: 11  LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70

Query: 92  -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +      + +++ A G  +   + +   +   +  LI +      L     ++ G    
Sbjct: 71  LMIAGFAAAIVVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNF 130

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            + + L          + F    +  V+       V +        + L++ R+ +  A 
Sbjct: 131 AIPNLL-------PGSLSFGPGGAQEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRAC 183

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F V +A   +A    +     I+     F   +   
Sbjct: 184 RACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVIN-PSAGFLVGLKAF 242

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           + V+LGG+ S+        +L         +    +  ++ F     +       I 
Sbjct: 243 TAVVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299


>gi|307150570|ref|YP_003885954.1| inner-membrane translocator [Cyanothece sp. PCC 7822]
 gi|306980798|gb|ADN12679.1| inner-membrane translocator [Cyanothece sp. PCC 7822]
          Length = 316

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 43/320 (13%), Positives = 99/320 (30%), Gaps = 31/320 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI--------------L 84
             +      +Y +FA G ++V   LG+++      + +GAY                   
Sbjct: 10  FLNGLSVGSVYAIFALGYTLVFSILGIINFAHGAIFTLGAYFVYFLIGGASGFNGWLSNA 69

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
              +     + + + ++++G   +I+   + K   +  A + L +       +     I 
Sbjct: 70  QLPFSFPFAIALLLGSVLAGLVAIIVERLAFKPLRERGADSLLTLVSSLGAAVFIVNLIQ 129

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                          G     +          V+       + L      A +   +  T
Sbjct: 130 LLVGAEIYTFPDNIYGN--LPVAINLGTVEKPVMVRTVQIIIFLVSALTLAVLTYLINST 187

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            I  A + + ++      L        +  F +S    GMAG    +S   I+   F  +
Sbjct: 188 KIGKALQAVAEDTTTASLLGINPEKYIVFTFFLSGFLGGMAGTLVGSSV-SIAGPYFGIT 246

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
             +  + +++LGG+ ++        I+                        ++     + 
Sbjct: 247 FGLKGLGVIVLGGLGNIPGAVIGGLIIGLAESFV--------------PTDYSGYREAIS 292

Query: 325 VIALFLVILMRSHSLLRLRT 344
              LF+++L+R   LL  + 
Sbjct: 293 FALLFIMLLVRPQGLLGRKR 312


>gi|91786472|ref|YP_547424.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91695697|gb|ABE42526.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas sp. JS666]
          Length = 411

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 99/334 (29%), Gaps = 36/334 (10%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +       +  ++  + L Y   A GL ++ G  G+LSL   + + +G Y   +      
Sbjct: 26  IFPLSLDLFRLNLVGKYLSYSFVALGLVMLWGYGGVLSLGQGVFFGLGGYGMAMFLKLEA 85

Query: 90  LSIWLLIPVSAMISGACGMIMGL-----PSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                    S            +         FR   L +  +++   F   +I +    
Sbjct: 86  SDPVTTKIQSTPGIPDFMDWNQITALPLWWEPFRSFPLTLLLILVVPTFLAFIIGYAMFK 145

Query: 145 NGKAGIYVA-----------------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               G+Y A                          +  L     + +     +  +Y+V 
Sbjct: 146 RRVGGVYFAIITQAVALILTVLIIGQQGYTGGVNGMTDLKTILGWDTRTDSAKYILYFVT 205

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
            G+   +  +  W++++ +      +RD +         +   ++ AF  ++    + GA
Sbjct: 206 AGLLLGAIVLCTWIQKSKLGTLLLAMRDKEDRVRFSGYDVAMFRVFAFCFAAMLSAVGGA 265

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            F      +SP +     +I ++    +GG  SL        ++                
Sbjct: 266 MFTLQVGFMSPSLVGIVPSIEMVIFAAVGGRMSLVGAVYGALLVNFGKTY---------- 315

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
               F  SF      LM      V+L     L  
Sbjct: 316 ----FSESFPDLWLFLMAAMFLGVVLAFPDGLAG 345


>gi|33595299|ref|NP_882942.1| putative branched-chain amino acid transport system permease
           protein [Bordetella parapertussis 12822]
 gi|33565376|emb|CAE36179.1| putative branched-chain amino acid transport system permease
           protein [Bordetella parapertussis]
          Length = 298

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 62/325 (19%), Positives = 126/325 (38%), Gaps = 37/325 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L  +  +   L         YI ++ + + +  + A  L  V+  +G L+      + IG
Sbjct: 7   LVFILFIAAVLVGCIALGSGYIGNLVVWMSVAAVMATSLRFVL-LIGELNFATAAFFGIG 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY    + +   L  +L++ +SA+++ A  ++ G  +LK +G Y  +     +E  + + 
Sbjct: 66  AYCTGYIANYLDLPFFLILALSALLALAVSVVFGCITLKVKGPYFLLIGFAFTEALRILY 125

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +   +  G +G+       +L                        +Y    +CF     
Sbjct: 126 TR-TDVLGGNSGLVGIFPPIWLEAH--------------------YHYFATVLCFALIVA 164

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +L++ R+ +   +  IRDN+    SL   +   K+  FAV+SA  G+AG+  A + + IS
Sbjct: 165 LLFVERSNLGKVFVAIRDNENVVRSLGIPVFMTKVLCFAVASAVAGLAGSVHAYASNVIS 224

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
              F F  +   ++ + +GG  S         +L+G+      +                
Sbjct: 225 SLDFGFMLSTFALAYLKVGGEDSPLGPIIGAVLLVGIASYAQTLGG-------------- 270

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                L  +A+ + +L     L+ L
Sbjct: 271 -NEHILYGLAIIVSVLFMPKGLMGL 294


>gi|296269449|ref|YP_003652081.1| inner-membrane translocator [Thermobispora bispora DSM 43833]
 gi|296092236|gb|ADG88188.1| inner-membrane translocator [Thermobispora bispora DSM 43833]
          Length = 322

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 97/313 (30%), Gaps = 27/313 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL------- 95
                IY + A G ++V G L L++      + IGA++ +    + G++  L        
Sbjct: 17  LASGAIYALIALGYTMVYGVLRLINFAHSEIFMIGAFAGLFAIIQLGITAPLGGLALIGT 76

Query: 96  ------IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
                   ++A    A  +         R     +A LI +      L +   +      
Sbjct: 77  LLVLFLAAMAASGGAAILLERVAYRPLRRRGAGRLAALISAIGASIFLQELFALVIIPEV 136

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                +        R L R   F    +        +++    +   + +++ RT I   
Sbjct: 137 FDRPSQGRIQVPVPRLLERETVFSIGNMDVRNDHLIIIVAAVIMMVLLDVFVNRTRIGRG 196

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    + +    +   I     + F V  A  G+A   +A   + +      F   I  
Sbjct: 197 IRATAQDPETATLMGVDIDKIIRTTFFVGGAMAGVAAVLYAMEFENL-RYNVGFLLGIKA 255

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ ++        +L  +           +  ++ F               L 
Sbjct: 256 FTAAVLGGIGNIRGALLGGILLGLIENWGSIFYGSEWKDVIAFT-------------VLV 302

Query: 330 LVILMRSHSLLRL 342
           LV+L R   +L  
Sbjct: 303 LVLLFRPTGILGE 315


>gi|293602111|ref|ZP_06684564.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292819513|gb|EFF78541.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 422

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 57/329 (17%), Positives = 120/329 (36%), Gaps = 34/329 (10%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             ++   +  L               +Q+LI  +FA   +++ G  G+LS      + +G
Sbjct: 10  ALLLIVCVAALCALPWLLPPGQLVAAVQMLIAALFACAFNLLAGQGGMLSFGHAAYFGVG 69

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGA----CGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            ++ +   +  G +  L  P+  ++ G      G++ G  +    G Y ++ TL ++E+ 
Sbjct: 70  TFATIHAMNALGGAGLLPTPLMPLVGGVAGLLFGLVAGWFATMRSGVYFSMITLALAELL 129

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +    K +  G+AG+       +  T                   I +Y+++L    +
Sbjct: 130 HALAPHLKSVFGGEAGVSAMRMPAWGFTFGSD---------------IEVYFLVLAWVLI 174

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           S + +  L RT +      +R+N      L       K   FA+S+ F G+AG   A + 
Sbjct: 175 SLAALYGLTRTPLGRLTLGLRENANRLRYLGYRPHALKTMVFALSAMFAGIAGGLQALNI 234

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           +  +  +F+   +   +    +GG+ +        AIL  + +    +   +        
Sbjct: 235 EAGNYVLFEVKLSTDAVLFAYIGGVNAFLGPVLGAAILTFLSQTLADITRSW-------- 286

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                       +   LV+L     L+ L
Sbjct: 287 -------LLYQGVLFVLVMLFVPDGLVGL 308


>gi|293607568|ref|ZP_06689902.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292814001|gb|EFF73148.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 333

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 51/314 (16%), Positives = 121/314 (38%), Gaps = 30/314 (9%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
                 + + ++ ++  ++L+Y + A  L++++G  G++S    +   +GAYS  ++   
Sbjct: 28  PVYAHWQGEPFLLALFGRVLVYAVAALALNLLLGFGGMVSFGHALYLGLGAYSVGVMSHY 87

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
              S WL +  +       G++ G   ++  G    + TL  +++F  +           
Sbjct: 88  GIESGWLHLAGALGACAVVGLVSGYVVMRTSGIAFIMITLAFAQMFYFLAT--------- 138

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                     F G    SL     F +  +   + +YY   G+     +++  L      
Sbjct: 139 ------GLDGFGGDDGMSLFAGSDFGAFRLDTPLALYYAAFGVLVAVLALMHRLIHAPFG 192

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
              R  + N++   +L    +  +L+A+ +S+   G+AG   A     +SP    ++ + 
Sbjct: 193 MVLRGCQANERRMRALGFPTLRYRLAAYVISAMICGVAGVLLANLTMYVSPSYLAWTTSG 252

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            +I +V+LGG+ +L          + + E    +  ++                 +M + 
Sbjct: 253 ELIVMVVLGGIGTLFGPVVGALAFLLLEEGLKLLTGHW---------------MLIMGLL 297

Query: 328 LFLVILMRSHSLLR 341
           +  V+L+    +  
Sbjct: 298 IVGVVLVSRRGVYG 311


>gi|15889697|ref|NP_355378.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15157605|gb|AAK88163.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 300

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 92/304 (30%), Gaps = 17/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G +G+++      + +G ++ +I+          +   
Sbjct: 8   LINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLIATSFFAGIPVA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      ++      +  + +A   L  S     ++            I V      
Sbjct: 68  LLLLLMMIVAMLMTGLWNWVIERVAYRPLRGSFRLAPLITAIGMSIALSNFIQVTQGPRN 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +    +    +   +    +++    L  +    + +T +  A R    ++K
Sbjct: 128 KPI---PSMVTESYHFGAITVSLKQLIIMVVTSVLLFAFWYIVNKTPLGRAQRATEQDRK 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       F + +A   +AG  +       S     F   +   +  +LGG+
Sbjct: 185 MAALLGVDVDKTISITFIMGAALAAVAGTMYLMYYGVASF-SDGFVPGVKAFTAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        ++  +  L        +  +  F               L  V++ +   
Sbjct: 244 GSLPGAVLGGLLIGLIESLWSAYFSIAYKDVAAFG-------------ILAFVLIFKPTG 290

Query: 339 LLRL 342
           +L  
Sbjct: 291 ILGR 294


>gi|241765733|ref|ZP_04763679.1| urea ABC transporter, permease protein UrtB [Acidovorax delafieldii
           2AN]
 gi|241364393|gb|EER59516.1| urea ABC transporter, permease protein UrtB [Acidovorax delafieldii
           2AN]
          Length = 304

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 89/301 (29%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++   GL+I+ G +G++++       IGAY+  +  +         +P    +
Sbjct: 18  LSLFAVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTIYLGSTLTAQHAPAFMPYYFPL 77

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +          +       L     +       +L  W      +           +  T
Sbjct: 78  AIVAAFGFAFAAGWLVEWGL--IRHLYKRPLDTLLATWGVSLALQQSFRTFIGPKEVSPT 135

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P+  +   I   +VL     ++  ++L L ++      R    N+    +
Sbjct: 136 LPDWLLGSWAPAEGLDIPINGLFVLGLTALVTGGVLLALHKSRWGLRVRATVSNRVMANA 195

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           FA+     G+AGA  A +    +         +    +V  GG  SL 
Sbjct: 196 IGIDTKKTDRLTFAIGCGIAGIAGA--AFTTIGSTGPTSGSLYIVDAFLVVTFGGAASLL 253

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     +           ++                 + L++++R   L   
Sbjct: 254 GTVVSAFGIAQTQSITEFFLAGSMAKVITLS-------------LIVLILMVRPQGLFAS 300

Query: 343 R 343
           +
Sbjct: 301 K 301


>gi|288960412|ref|YP_003450752.1| ABC transporter permease protein [Azospirillum sp. B510]
 gi|288912720|dbj|BAI74208.1| ABC transporter permease protein [Azospirillum sp. B510]
          Length = 325

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 58/312 (18%), Positives = 118/312 (37%), Gaps = 29/312 (9%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
                   +   +  + +I  M A  LS++VG  GL+SL       IGAY+ V   +   
Sbjct: 22  PFLGFGDGFALGLLARAMILGMAAVSLSLLVGGAGLVSLGHAATMGIGAYAVVAFDAAGI 81

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
               ++ P +   + A  ++ G  SL+  G +  + TL   ++       +  +  G  G
Sbjct: 82  SEGLIVFPAAIAAAAAYALVTGAVSLRTSGVHFIMITLAFGQMAFFTTSSFSSL-GGDDG 140

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             +  R  +LG  +                 +  +++ LG+  L       L  +     
Sbjct: 141 YTLYARTEWLGMRILDNR-------------LAFHFLCLGLLALVWIGGTLLLGSRFGRV 187

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R  R+N +   ++       +L+A+ ++ A  G+AGA  A + + +SP +  ++ +  +
Sbjct: 188 LRAARENPQRALAVGFQPYPYRLTAYGMAGAVGGLAGALLANATEFVSPALLSWTRSGEL 247

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           + +VILGG+  L         ++ + E    +  Y+                 +    L 
Sbjct: 248 LFMVILGGVGQLGGAILGALAMVLLEETLSHLLVYW---------------RLVFGPLLV 292

Query: 330 LVILMRSHSLLR 341
           L +L     L+ 
Sbjct: 293 LAVLFLPDGLVG 304


>gi|229490169|ref|ZP_04384016.1| putative high-affinity branched-chain amino acid transport protein
           [Rhodococcus erythropolis SK121]
 gi|229322917|gb|EEN88691.1| putative high-affinity branched-chain amino acid transport protein
           [Rhodococcus erythropolis SK121]
          Length = 319

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 64/323 (19%), Positives = 119/323 (36%), Gaps = 30/323 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A++  +++   L       Y   +      Y + A G+ +     G LS+      AIGA
Sbjct: 8   ALITVVVVAAVLLWMGPSLYRQDLVFLAATYSLIALGMYVPFVLAGSLSMAYSAYAAIGA 67

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  ++  R GLS+W    + A+ + A  +++ L + K  G YLA  TL+    F++ LI
Sbjct: 68  YAVALISVRTGLSMWWGWILGALAAAAVAVLLSLATQKLSGFYLAAVTLLFGIAFEHWLI 127

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                T G AGI   + +                   +      +    +    L A  +
Sbjct: 128 DGPSFTGGSAGISGVETVTMF---------------GWEPPRYALVVFAILFVCLIAVAV 172

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             LR++      +  RDN+    S         + A A+ +A     G+ F  S   ++P
Sbjct: 173 DRLRKSVWGLMLQAARDNRNVARSSGVNPAHLTVVALAIGAAIASTGGSLFTVSVQAVTP 232

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F  S   + I + I+GG  S         I++ V     G                  
Sbjct: 233 ETFTLSIVFLAIFMPIIGGRGSAWGAPLGALIVVIVTLNMPGYQGSGE------------ 280

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
               L+  A+ +++++    ++ 
Sbjct: 281 ---LLLAGAVLVILIVAPGGVIG 300


>gi|56751927|ref|YP_172628.1| neutral amino acids ABC transporter permease NatD [Synechococcus
           elongatus PCC 6301]
 gi|56686886|dbj|BAD80108.1| integral membrane protein of the ABC-type Nat permease for neutral
           amino acids NatD [Synechococcus elongatus PCC 6301]
          Length = 317

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 92/303 (30%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +  + A GL+++ G L L +        +GAY  ++  S        +   +
Sbjct: 41  INGLATGSLLALAATGLTLIYGILRLTNFAQGEFLTLGAYFTLVANSLGLSLWLAIPLGA 100

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                 C +   +     R   +   TLI+  I  ++ ++   I    AG          
Sbjct: 101 IATIALCLLGEAVLWEPLRRQRVNTTTLIILTIGLSLFLRNLVILIWGAGNQAYRLAVQP 160

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
             T+             +   +    V++G       +   L+RT+I    R I D+   
Sbjct: 161 ALTLWG-----------LRITLNSLLVVIGAAAALVLLHWVLQRTSIGKGMRAIADDPDL 209

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                  +       + ++     +AG  +             ++  + + +  ILGG+ 
Sbjct: 210 ARVSGVPVETVIRWTWVIAGGLTAIAGGLYG--LITAVRPTMGWNLILPLFASAILGGIG 267

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S         IL    EL        +   + F             + L  V+++R   L
Sbjct: 268 SPYGAIAGGLILGFAQELSTYWLPAEYKLAVAF-------------VILIGVLVIRPQGL 314

Query: 340 LRL 342
              
Sbjct: 315 FAR 317


>gi|325108725|ref|YP_004269793.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Planctomyces brasiliensis DSM 5305]
 gi|324968993|gb|ADY59771.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Planctomyces brasiliensis DSM 5305]
          Length = 328

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 101/313 (32%), Gaps = 20/313 (6%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +    +  L +V  L+      A      I+ +  +  +Y + + G ++V+   G + L+
Sbjct: 2   RKILGILGLLIVVCLVTAWNNPAFMKPTNIEQLLHRTSLYGLISLGAALVI-ITGGIDLS 60

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +      +L ++Y  S+   +  +A +S   G+  GL   K +     +    +
Sbjct: 61  IGSVVGLCGSLLPLLLTQYEWSVGSALAATAAVSICIGLAHGLLITKLKIQPFIVTLCGL 120

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 +         G +     D    L    +  +         +   + +  V L 
Sbjct: 121 L-----LYRGLARWLTGDSNQRFGDDFASLRWLAKGKLD--------IGLPVELPVVALV 167

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              +S    ++L RT        +  N++A            ++A+ +SS   G+ G  F
Sbjct: 168 FFGVSVIAWIFLNRTIWGRHLLALGRNEQAARFSGIATDRLTITAYVLSSFLAGLGGILF 227

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNF 303
           A  ++ + P        +  I+  +LGG        S+  +A   A+L  +         
Sbjct: 228 ALDQNTVQPSAHGSFYELYAIAAAVLGGCSLRGGEGSIIGVAIGAALLRVLYNAIILAGI 287

Query: 304 YYFNSLLKFDCSF 316
                        
Sbjct: 288 PSQLEFAIIGMVI 300


>gi|312198592|ref|YP_004018653.1| urea ABC transporter permease [Frankia sp. EuI1c]
 gi|311229928|gb|ADP82783.1| urea ABC transporter, permease protein UrtB [Frankia sp. EuI1c]
          Length = 292

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 90/305 (29%), Gaps = 25/305 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + +M + GL+   G +G++++       +GAY+  +L S  G    L     A +
Sbjct: 12  LSIAAVLLMSSLGLTFTFGQMGVINMAHGEFIMVGAYTTYMLQSWAGHEAVLAALPVAFV 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 ++   +L  R     + TL+++     IL +         G+ V          
Sbjct: 72  VAGLFGVILERTLIRRFYGRPLDTLLLTWGVSLILQQLVRDLIDNRGVQVVAP------- 124

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                         V       ++        A+I L++ RT      R +  N++    
Sbjct: 125 ---GWLIGGADWGGVRIPYNRVFIFALAIVCLAAIWLYMSRTPAGRRMRAVMQNRELAAC 181

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       F + S   G+AG     +              +    +V++GG+  L 
Sbjct: 182 SAVRTDRVDQLTFFLGSGLAGVAGV--GLTLVGTISPTLGQRYIVDAFLVVVVGGLGQLR 239

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L  +              ++ F                   +  R   L +L
Sbjct: 240 GAVIAAFALGLLNSYSEFWTNSSLAKVIVFVVIVAF-------------LQARPQGLFQL 286

Query: 343 RTPSN 347
           R+ + 
Sbjct: 287 RSRAL 291


>gi|254720369|ref|ZP_05182180.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. 83/13]
 gi|265985388|ref|ZP_06098123.1| inner-membrane translocator [Brucella sp. 83/13]
 gi|306837464|ref|ZP_07470340.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. NF 2653]
 gi|264663980|gb|EEZ34241.1| inner-membrane translocator [Brucella sp. 83/13]
 gi|306407507|gb|EFM63710.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. NF 2653]
          Length = 328

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 52/327 (15%), Positives = 116/327 (35%), Gaps = 27/327 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
              +   +++   +          ++  +I+   +    L +V G  G+ +L     +  
Sbjct: 16  AGLIGIVVIIAASVVGWFLFPDNLALLTRIIAIALLVLSLDLVTGYCGIATLGHAALFGA 75

Query: 77  GAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GAY   I  + +      L+  +  +     G+I G   L+  G    + ++ +  +F  
Sbjct: 76  GAYGAGIAAAHFGITDPILMTVIGLLAGAVTGLISGAVILRATGLAQLVLSIAVVHLFHE 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
              K    T G  G+         G             S F +Y   +Y   + +  +S 
Sbjct: 136 AANKASSWTGGSDGLSGISPDPIFGI------------SEFDLYGRTVYIYTVILLLISF 183

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             + ++ R+      R ++++     ++  ++  A+L  + +S A  G+ GA  A S   
Sbjct: 184 IFLRYVARSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISGAVAGIGGALNAISTQV 243

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +  D   F+     + +++LGG  SL      T + +   ++    N +++         
Sbjct: 244 VGLDSLSFTMLAEALVMLVLGGAGSLFGGLVGTVVFMWFEDVVSTANPFHW--------- 294

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                 T++   L  V+L     L   
Sbjct: 295 -----LTMVGALLIAVVLFAPRGLYGT 316


>gi|237654480|ref|YP_002890794.1| branched-chain amino acid ABC transporter permease [Thauera sp.
           MZ1T]
 gi|237625727|gb|ACR02417.1| inner-membrane translocator [Thauera sp. MZ1T]
          Length = 320

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 55/268 (20%), Positives = 112/268 (41%), Gaps = 14/268 (5%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y      ++LI  + A  L+ ++G  G+ +L       +GAY+ V L      S WL   
Sbjct: 34  YYVGFVRRVLIVAIAASSLNFILGYGGMAALGHAGFIGVGAYTVVALVEAGVSSAWLAWG 93

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            +A+++G     +G  SL+ RG Y  + TL  +++   + +       G  G  +   L 
Sbjct: 94  SAAVLAGLFAAAIGAVSLRTRGVYFIMITLAFAQMLHYLAVSL-RTYGGDDGYGLYTPLA 152

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                  +  +               Y+V+L +     ++   +  +   +A R +RDN+
Sbjct: 153 LGAWLDGAHAQ-------------VFYWVVLAIAAAVFALFSRVAHSRYGHALRGVRDNE 199

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +L   +   KL+ F  + A  G+AG   A+    +SP +  ++++ +++ +V+LGG
Sbjct: 200 TRMVALGYPVYRLKLAGFVAAGAVAGLAGGLLASHNAFVSPSIMHWTQSALLLVMVMLGG 259

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYY 305
                      A+ + + E+      Y+
Sbjct: 260 AGRRWGAPLGVALWLTLEEVLKLYTDYW 287


>gi|288959235|ref|YP_003449576.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288911543|dbj|BAI73032.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 318

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 94/315 (29%), Gaps = 15/315 (4%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 + I +      +Y + A G ++V   LG ++L       IGA    I G+  G+
Sbjct: 14  PVLFLAQQIINAATVACVYGLLALGYTLVYAILGQINLAMGELTMIGAMVTAIAGAGLGM 73

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           + W   P + +      +             +      +      I+     I   +   
Sbjct: 74  AGWATWPPALLGVLVLVIGFTAVQGWTMDRLVFRRLRGVRGHTPLIVAVGLSIAYQEGVR 133

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL-WLRRTAISNA 209
            +     +    V +         +F +  +     +L +     + +   +R TA   A
Sbjct: 134 LLHGARDWWPAPVLTQRFDLASDGAFTVTALTAQLAILALTGGLYAALWGIMRHTAFGRA 193

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R   D+  A   +   +     + FA+       AGA  A     ++            
Sbjct: 194 HRACTDDIAAAELVGVDVNRTVAATFAIGGGLAAAAGAVIALYYGGVNFFTGYLI-GFKA 252

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           ++  ++GG+ S+       A+L  V           +  ++ F               L 
Sbjct: 253 LAAAVVGGIGSVPGAMLGGALLGLVETFWSAYFALAYKDIVAFG-------------LLT 299

Query: 330 LVILMRSHSLLRLRT 344
           L ++ R   LL    
Sbjct: 300 LFLIFRPQGLLGQAR 314


>gi|91790942|ref|YP_551893.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91700822|gb|ABE46995.1| inner-membrane translocator [Polaromonas sp. JS666]
          Length = 305

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 98/307 (31%), Gaps = 15/307 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL++V G + +++L     Y +GA+    +    G     ++   
Sbjct: 10  LNGFQFGLMLFLLAAGLTLVFGIMDMINLAHGSLYMVGAFLTAAVTQASGSYTVGVLSAL 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           A  +    ++      +              +    +L  +  I     G+ +      +
Sbjct: 70  AGTAVFGMLLEVSLLRRLYRR----------DHLSQVLATFALILICNEGVRMIWGASPI 119

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                  +         + Y      +++    ++  + + + +T +    R    N++ 
Sbjct: 120 KLNAPEALSRPIELVPGLFYPAHRLLIIVVGIVVAIGLYILVAKTRVGMWVRAGASNREM 179

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             ++   I +     F   +A   +AG+  +             S  I+   +V++GG+ 
Sbjct: 180 ATAMGVNIQWLFTFVFGFGAALCALAGSMLSPLMAV--QVGMGESILILAFVVVVIGGIG 237

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMRS 336
           S+        ++  V  L   +        L    +        + ++ + +  V+  + 
Sbjct: 238 SIRGAFVGALLIGTVDTLSRTLIPTLLGQFLSPSTTSALGPALASIIIYVLMAAVLFWKP 297

Query: 337 HSLLRLR 343
             L   R
Sbjct: 298 QGLFPAR 304


>gi|187925992|ref|YP_001892337.1| inner-membrane translocator [Ralstonia pickettii 12J]
 gi|241665477|ref|YP_002983836.1| inner-membrane translocator [Ralstonia pickettii 12D]
 gi|187727746|gb|ACD28910.1| inner-membrane translocator [Ralstonia pickettii 12J]
 gi|240867504|gb|ACS65164.1| inner-membrane translocator [Ralstonia pickettii 12D]
          Length = 293

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 53/303 (17%), Positives = 109/303 (35%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y +FA G ++V G LG+++L+    + +GAY+ + + + + L +W  + V
Sbjct: 6   LVNALSLGCVYALFALGFTLVFGILGVINLSHGAVFMLGAYAALQVVTHFELPLWAALAV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++SG  G+I+ +         L       +      +I                    
Sbjct: 66  GFVVSGVAGLIIDVL--------LLRPLRRRNAPHLIPMIGTIGAGIAINNAMQGVFGAE 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L+         +        +++    L A ++L L+RT +  A R I ++ K
Sbjct: 118 NLRFPAGLVSDASLDLGGIHLMPLELGIIVLSFALMAGLMLLLKRTQLGRALRAIAESPK 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +    L     ++A  G++G       + + P M +   +  + +++ILGG+
Sbjct: 178 AAALLGINVEGLFLLTSFAAAALGGLSGVLIGLYSNAVFPLMGQPMLHKGI-AVIILGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +         L     L            + F               LFL++L+R   
Sbjct: 237 GDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG-------------LLFLILLVRPQG 283

Query: 339 LLR 341
           L  
Sbjct: 284 LFG 286


>gi|288923302|ref|ZP_06417438.1| ABC transporter related protein [Frankia sp. EUN1f]
 gi|288345362|gb|EFC79755.1| ABC transporter related protein [Frankia sp. EUN1f]
          Length = 601

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 55/302 (18%), Positives = 101/302 (33%), Gaps = 23/302 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
                   +     L   +    + +V G  G LSL   +  AIGA+  V L    GL  
Sbjct: 2   LVLSDGWVTAMSVTLANAVVGLSVLLVTGYAGQLSLAQYLIGAIGAFIAVKLMDALGLPF 61

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            L      + +   G ++G P+L+ RG  LA++TL ++     + +    +     G+  
Sbjct: 62  ELSFLGGVVSAMIIGAVLGAPALRTRGVNLAVSTLGIAISLYALFLANTQLAGSTDGLP- 120

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                  G  +       R+  + +   +     L  +    A   L   R+    A   
Sbjct: 121 VTTPSLFGLDLDPGEHPRRYAIAVLAVLLVTLLALANLRRGRAGRRLLAVRSNERAAL-- 178

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
                    +L   +  AKL AF V++    +  +  A   +R+    F    +I   + 
Sbjct: 179 ---------ALGIDVYVAKLYAFMVAAGMAAVGVSLVAFLNERVVFSRFDVFTSITATTS 229

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            ++GG+  L       A+L                S           +  L+   L L++
Sbjct: 230 TVVGGIGMLIGPIIGAAVL-----------PNSIVSKFITQWGAADTYLPLVGAILVLLV 278

Query: 333 LM 334
           L+
Sbjct: 279 LI 280


>gi|210611480|ref|ZP_03288916.1| hypothetical protein CLONEX_01106 [Clostridium nexile DSM 1787]
 gi|210151980|gb|EEA82987.1| hypothetical protein CLONEX_01106 [Clostridium nexile DSM 1787]
          Length = 554

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 27/318 (8%), Positives = 85/318 (26%), Gaps = 9/318 (2%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y  I+ +  ++  +   +      +   + ++  Q    +  A G++ ++   G   L+ 
Sbjct: 231 YIAIILIFIMLCIITPMVKGSPLLTYNNVLNILQQASPRMFLALGVAALILLAG-TDLSI 289

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +G  +  I+  +   +    +           +   +         L      ++
Sbjct: 290 GRMVGMGMTTATIIMHQGVNTG--SVFGHIFDFTKMPLGARVILALVMCILLCTVFTTIA 347

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             F         I+     + +   + +    V         P+  +        ++L  
Sbjct: 348 GFFTAKFKMHPFISTMANMLVIFGLVTYATKGVSFGAIEPAIPNMVIPKINGFPTIILWA 407

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 + +   +T        +  N +A      ++ +  + AF ++    G       
Sbjct: 408 VAAIVIVWIIWNKTTFGKNLYAVGGNPEAASVSGISVFWVTVGAFVLAGVLYGFGSWLEC 467

Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFY 304
                     +     +  I+  ++      GG+  +S +     I   +      +   
Sbjct: 468 VRMVGSGSAAYGQGWEMDAIAACVVGGVSFTGGIGKISGVVVGVCIFTALTYSLTILGID 527

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +       +  T 
Sbjct: 528 TNLQFVFSGIIILVAVTL 545


>gi|315641261|ref|ZP_07896338.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Enterococcus italicus DSM
           15952]
 gi|315483028|gb|EFU73547.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Enterococcus italicus DSM
           15952]
          Length = 292

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 99/303 (32%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y IG++    L  + G   +  + +
Sbjct: 8   VVNGLFLGSIYALMALGYTMVYGIIKLINFAHGEIYMIGSFIGYFLIKQLGFGFFPSMII 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+++   + +       I+ LI +     +L              +      
Sbjct: 68  AMVGCAILGVVIEFLAYRPLRKSTRISALITAIGVSYLLQNL-----------MIYFFKP 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I    +   F+        +L    FL   + + +++T +  A R +  +  
Sbjct: 117 DTRPFPQVIARQTYQLGFISVSNIQLLILGVSLFLMILLQVIIQKTRMGKAMRAVSVDAD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA     G       + I   M      +      +LGG+
Sbjct: 177 AAQLMGINVNRTISFTFALGSALAAAGGMLIGLYYNSID-PMMGVVPGLKSFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +  +   +              F+      +   L +++L+R   
Sbjct: 236 GVIPGAAIGGFVIGLIETISTALG-------------FSDYKDAFVYGVLIIILLIRPAG 282

Query: 339 LLR 341
           +L 
Sbjct: 283 ILG 285


>gi|241206006|ref|YP_002977102.1| urea ABC transporter permease [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240859896|gb|ACS57563.1| urea ABC transporter, permease protein UrtC [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 387

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 53/330 (16%), Positives = 96/330 (29%), Gaps = 33/330 (10%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 YI S+  + L Y + A  L +V G  G+LSL     +A+G Y+  +   R   +
Sbjct: 40  PLHVPTYIMSLFGKYLTYALLALALDLVWGFCGILSLGHGAFFALGGYAMGMYLMRQIGT 99

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA--- 148
                               LP   F  ++   A L++  +   +   +           
Sbjct: 100 RGSYGDPVLPDFMVFLNWKDLPWFWFGFNHFWFAALMVLVVPGLLAFVFGWFAFRSRVNG 159

Query: 149 ----------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
                             +  D  +     +        F          ++        
Sbjct: 160 VYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDIIGFSVQADGTRAVLFAATAIFLA 219

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           LS  I   + R+        +RD +     L   +   KL  F VS+   G+AGA +   
Sbjct: 220 LSLLIASAIVRSKFGKVLVGVRDAESRTRFLGYRVEHFKLFTFVVSAMMAGIAGALYVPQ 279

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              I+P  F  + +I V+    +GG  +L        ++ G   +  G+           
Sbjct: 280 VGIINPGEFAPANSIEVVIWTAVGGRATLIGPIIGAILVNGGKTIFTGL----------- 328

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              F       +      V L     ++  
Sbjct: 329 ---FPEFWLFALGGLFVAVTLFLPKGVVGT 355


>gi|306825608|ref|ZP_07458947.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
 gi|304431969|gb|EFM34946.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
          Length = 289

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 103/303 (33%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y IGA+    L + + +  +L + +
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMIGAFIGYFLINSFQMDFFLALII 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S   +   G+++   + +       IA LI +     +L        G            
Sbjct: 65  SMAGTALLGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I   RF    +        +L     L   + L +++T +  A R +  +  
Sbjct: 115 -TRAFPQAIETVRFDFGPISLTNVQLMILAVSVLLMVLLQLIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|239908531|ref|YP_002955273.1| putative ABC transporter permease protein [Desulfovibrio magneticus
           RS-1]
 gi|239798398|dbj|BAH77387.1| putative ABC transporter permease protein [Desulfovibrio magneticus
           RS-1]
          Length = 301

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 51/282 (18%), Positives = 105/282 (37%), Gaps = 13/282 (4%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
                L +    +  +      Q L   +    L+  +G  G +SL       +GA+  V
Sbjct: 11  LFFAALAVVGLATPGFQLLAVNQHLFLAVNVLALNFCLGLGGQISLAQAAFAGLGAFGSV 70

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +L  R+  +  +++P   + +G    ++  P  +    +LA+ATL +S +F N+++  + 
Sbjct: 71  LLHDRFPEATLVIVPAVVLGTGLLAAMLSRPMERLGEGFLAMATLCVSLVFTNLVLTLES 130

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G AG     RL        S  R   F  + ++      ++ L             R
Sbjct: 131 VTGGSAGHMANARLALPLLGSLSGDRATFFCFAGLLALGSYIFLAL-------------R 177

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            + +  A    R + +A  SL       +  +F +       AG         ISP+ + 
Sbjct: 178 DSRLGRALAACRGDAQAASSLGVDRAAVRSLSFGLGGGLSAAAGVIHGHYTGFISPEQYH 237

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
              ++  +  +++GG  +L +   A  +L   +     +   
Sbjct: 238 LELSLKALLFLVIGGPGNLLRPILAALVLETAMSWLSVLGDA 279


>gi|260587061|ref|ZP_05852974.1| galactoside ABC transporter, permease protein MglC [Blautia
           hansenii DSM 20583]
 gi|331082833|ref|ZP_08331955.1| hypothetical protein HMPREF0992_00879 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260542551|gb|EEX23120.1| galactoside ABC transporter, permease protein MglC [Blautia
           hansenii DSM 20583]
 gi|330400162|gb|EGG79811.1| hypothetical protein HMPREF0992_00879 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 551

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/319 (9%), Positives = 89/319 (27%), Gaps = 11/319 (3%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL-LSLN 69
           Y  IL +   +  +   +      +   + ++  Q    +  A G++ ++   G  LS+ 
Sbjct: 228 YIAILLIFIALCIITPIVKGSPLLTYNNVLNILQQASPRMFLALGVAALILLAGTDLSIG 287

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
            ++   + A + ++        ++  I     +     +I+ L        +        
Sbjct: 288 RMVGMGMTAATIIMHQGINTGGVFGHIFDFTGMPVIARVILALVVCIVLCTFFTTIAGFF 347

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +  F+        I+     + +   + +    V         P+  +        ++L 
Sbjct: 348 TAKFKMH----PFISTMANMLVIFGIVTYATKGVSFGAIEATIPNMVIPKVNGFPTIILW 403

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
                A +     +T        +  N +A      ++    + AF ++    G      
Sbjct: 404 AVAAIAIVWFIWNKTTFGKNLYAVGGNPEAASVSGISVFGVTVGAFVMAGVLYGFGSWLE 463

Query: 250 AASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNF 303
                      +     +  I+  ++      GG+  +S +     I   +      +  
Sbjct: 464 CIRMVGSGSAAYGQGWEMDAIAACVVGGVSFTGGIGKISGVVVGVFIFTALTYSLTILGI 523

Query: 304 YYFNSLLKFDCSFNMRHTT 322
                 +       +  T 
Sbjct: 524 DTNLQFVFSGIIILVAVTL 542


>gi|297199821|ref|ZP_06917218.1| D-ribose ABC transporter permease [Streptomyces sviceus ATCC 29083]
 gi|197710285|gb|EDY54319.1| D-ribose ABC transporter permease [Streptomyces sviceus ATCC 29083]
          Length = 645

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 50/314 (15%), Positives = 104/314 (33%), Gaps = 29/314 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +V  + +    G   +   + ++G+Q  +  + A+G++ V+ S G + L+     
Sbjct: 24  ALTALIVLVIAMSALSGDFLTTDNLLNVGVQAAVTAILAFGVTFVIVSAG-IDLSVGSVA 82

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A       +++G+ +++ + ++ +   A G++ G      +      ATL M  + +
Sbjct: 83  ALSATVLAWSATQHGVPVFIAVVLAVVTGIAAGLVNGFLIAYGKLPPFI-ATLAMLSVAR 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +          G  +A                       V+  +   +VL       
Sbjct: 142 GLSLVI------SEGSPIAFPDSVSHLGDTLGGWLPVPVLVMVVMGLLAAFVLG------ 189

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                   RT I  +   I  N++A       +   KL+ +A S  F  +AG   AA   
Sbjct: 190 --------RTYIGRSMYAIGGNEEAARLSGLRVKKQKLAIYAFSGVFAAVAGVVLAARLS 241

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              P        +  I+ V++GG          S       IL  +      +N   F  
Sbjct: 242 SAQPQAAD-GYELDAIAAVVIGGASLAGGTGKASGTLIGALILAVLRNGLNLLNVSAFWQ 300

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 301 QVVIGVVIALAVLL 314


>gi|325293762|ref|YP_004279626.1| urea/amide ABC transporter transmembrane protein [Agrobacterium sp.
           H13-3]
 gi|325061615|gb|ADY65306.1| urea/amide ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 392

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 59/346 (17%), Positives = 100/346 (28%), Gaps = 33/346 (9%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           LL     A +   YI SM  + L Y + A  L +V G  G+LSL     +A+G Y+  + 
Sbjct: 33  LLLPADSAFRIPTYIMSMLGKYLAYALLALALDLVWGYCGILSLGHAAFFALGGYAMGMY 92

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
             R   +  +                 LP      D    A L++  +   +   +    
Sbjct: 93  LMRQIGTRGVYGHPVLPDFMVFLNWKELPWFWHGFDMFWFAALMVLVVPGLLAFVFGWFA 152

Query: 145 NGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                                    +  D  +     +        F          ++ 
Sbjct: 153 FRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILGFSVQADGTRAVLFA 212

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +   M  LS  I   +  +        +RD +     L   +   KL  F VS+   G+A
Sbjct: 213 MTAVMLALSLLIASGIVNSKFGKVLVGVRDAESRVRFLGFRVENIKLFTFVVSAMMAGIA 272

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA F      I+P  F  + +I V+    +GG  +L        ++ G      G     
Sbjct: 273 GALFVPQVGIINPGEFSPANSIEVVVWTAVGGRGTLIGPIIGALLVNGGKSYFTG----- 327

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                    +F       +      V L     ++          R
Sbjct: 328 ---------AFPEFWLFALGGLFIAVTLFFPKGIVGTVQHYLVGRR 364


>gi|298241437|ref|ZP_06965244.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963]
 gi|297554491|gb|EFH88355.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963]
          Length = 337

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 44/325 (13%), Positives = 103/325 (31%), Gaps = 24/325 (7%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS----------- 91
            +   IY + A G ++V G + L++      + IG+   +   +  G++           
Sbjct: 12  LVAGAIYALIALGYTMVYGIIELINFAHGDIFMIGSMLAIAALTLMGVTGSSHPTGLALA 71

Query: 92  --IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
             + +    + +     G+++   + +   +   +A LI +     IL     + NG   
Sbjct: 72  GLLIVSCLFAMLGCAVLGVLIERIAYRPLRNAPRLAPLISAIGVSLILEDIGKLWNGINF 131

Query: 150 IYVADRLYFLGTT---------VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           +                         +     P+  VI        ++    L  ++   
Sbjct: 132 VRFPQIFPRYDYCLWPISLDSVFPPHVTCLARPADTVIITSNNLLDIIMAVVLMIALQWL 191

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           + RT +  A R +  +++A   +   +       F + +A  G AG  +       +   
Sbjct: 192 VSRTKMGRAMRAVAQDREAAALMGVNVDRVISMTFFIGAALAGAAGFIYGLQYGN-TIYS 250

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
             F   ++     +LGG+ ++         +  + E                        
Sbjct: 251 IGFDYGLVAFIAAVLGGIGNIRGAMLGGLFIGVI-EAMTSFIPDSNVYGFGLPHGGGAWT 309

Query: 321 TTLMVIALFLVILMRSHSLLRLRTP 345
             ++   L L+++ R   LL  +TP
Sbjct: 310 RAVIFAILILILVFRPSGLLGQQTP 334


>gi|322368597|ref|ZP_08043165.1| inner-membrane translocator [Haladaptatus paucihalophilus DX253]
 gi|320551881|gb|EFW93527.1| inner-membrane translocator [Haladaptatus paucihalophilus DX253]
          Length = 379

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 57/340 (16%), Positives = 107/340 (31%), Gaps = 40/340 (11%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS------RYGLSIWLLI 96
            I +L + +FA     + G  G LS      Y  GAY  ++  +        G    + +
Sbjct: 19  MIPVLYFGLFAMSFDFISGYTGYLSFGHAAFYGTGAYFVILTANDKIPLLPPGTPFMVSL 78

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP---------ITNGK 147
            V+ +++ A  + +G  S +  G Y A+ TL  +++    +  W             NG 
Sbjct: 79  VVAGLVAVALALAIGAVSFRLTGVYFAMITLGFAQVLYVFVRGWDYVGSNPRDGIFLNGA 138

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI--FMYYVLLGMCFLSASIILWLRRTA 205
            G+ +              +        FV        YY++  +  +    +  +  + 
Sbjct: 139 NGLNIGVPGVDALNLSIGALTGDEVSLGFVHLGQTEVSYYMIGLVVLVCYFAMQRIIHSP 198

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DMFKFS 264
                  IR+N++   ++       KL AFA+S+ F  +AG   A     +SP + F F 
Sbjct: 199 FGKVMVAIRENEERAIAVGYDTFRYKLGAFAISAFFAAVAGGLLAGYERTVSPDESFNFL 258

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY-------------------- 304
                +   I+GG  +L+             E                            
Sbjct: 259 VAGDALLASIIGGFGTLAGPLYGQLFNETFREFLSKAGEGGGLLPYLRTHLGSGVMGTTI 318

Query: 305 --YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                     +   N   +  +     L +L   + LL  
Sbjct: 319 YNGLTVQGAIETFLNGHASLYVGTLFVLFVLFVPNGLLGT 358


>gi|283853362|ref|ZP_06370609.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
 gi|283571230|gb|EFC19243.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
          Length = 305

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 89/304 (29%), Gaps = 13/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++      +A G Y  VIL S       +    
Sbjct: 8   LINGLTLGGVYALVALGYTMVYGIISLINFAHGEIFAAGGYMGVILLSYLASHGLMESHP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++ A  + MG  ++            +      ++L+    ++       +  +  +
Sbjct: 68  WFGLAFALVLAMGYCAMLAMAVEKVAYKPLRGSSRLSVLLSALGMSIFLQNGLMLTQGVY 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                    +   F    +        ++     L   +   + +T I  A R    ++ 
Sbjct: 128 DKAYPTEFTQG-GFEFWGLRLNYMQIGIIGVTALLLFLLNALVYKTRIGKAMRATAQDKV 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + FA+ +     AG         +      F   I   +  +LGG+
Sbjct: 187 MSALVGINSDRVISTTFAIGAMLAAAAGIMVGLYYGSV-RYDMGFVPGIKAFAAAVLGGI 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +++       ++  V  L      +                     + L LV+      
Sbjct: 246 GNITGAMIGGLVIGMVEILAAAYIPHG-----------GEYKDVFAFVILILVLYFMPTG 294

Query: 339 LLRL 342
           ++  
Sbjct: 295 IMGE 298


>gi|190893140|ref|YP_001979682.1| urea or short-chain amide ABC transporter permease [Rhizobium etli
           CIAT 652]
 gi|190698419|gb|ACE92504.1| probable urea or short-chain amide ABC transporter, permease
           protein [Rhizobium etli CIAT 652]
          Length = 387

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 52/330 (15%), Positives = 95/330 (28%), Gaps = 33/330 (10%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 YI ++  + L Y + A  L +V G  G+LSL     +A+G Y+  +   R   S
Sbjct: 40  PLHIPTYIMALFGKYLTYALLALALDLVWGFCGILSLGHGAFFALGGYAMGMYLMRQIGS 99

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA--- 148
             +                 LP   +  D    A L++  +   +   +           
Sbjct: 100 RGVYGDPVLPDFMVFLNWKELPWFWYGFDQFWFAALMVLAVPGLLAFVFGWFAFRSRVNG 159

Query: 149 ----------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
                             +  D  +     +        F          ++        
Sbjct: 160 VYLSIITQAMTYALLLAFFRNDMGFGGNNGMTDFKDILGFNIQADGTRASLFAATAIFLA 219

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            S  I   + R+        +RD +     L   +   KL  F VS+   G+AGA +   
Sbjct: 220 SSLVIASAIVRSKFGKVLVGVRDAESRTRFLGYRVEHFKLFTFVVSAMMAGIAGALYVPQ 279

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              I+P  F  + +I V+    +GG  +L        ++ G   +  G+           
Sbjct: 280 VGIINPGEFAPANSIEVVIWTAVGGRGTLIGPIVGAILVNGGKTIFTGL----------- 328

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              F       +      V L     ++  
Sbjct: 329 ---FPEFWLFALGGLFVAVTLFLPKGVVGT 355


>gi|153008446|ref|YP_001369661.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
 gi|151560334|gb|ABS13832.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
          Length = 302

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 98/304 (32%), Gaps = 15/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G +G+++      + +GA+  +I+       I  L   
Sbjct: 8   VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDVFMLGAFMALIVFLMITTFIGALPIA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      ++      +  + +A   L  S      LI    ++   +      +   
Sbjct: 68  LMLLLMMIVAMLLTGLWSWTIERVAYRPLRGSFRLAP-LITAIGMSIALSNFVQVTQGPR 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                + L   +    + V   +    V++    L       + RT++  A R    ++K
Sbjct: 127 NKPVPQLLNGSYNIMGTNVTISLKQIVVIVVTAVLLTIFWYIVNRTSLGRAQRACEQDRK 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       F + +    +AG  + +    IS     F   +   +  +LGG+
Sbjct: 187 MAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKAFTAAVLGGI 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        ++  +  L        +  +  F               L +V++     
Sbjct: 246 GSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILAIVLIFMPSG 292

Query: 339 LLRL 342
           +L  
Sbjct: 293 ILGR 296


>gi|238791334|ref|ZP_04634973.1| Inner-membrane translocator [Yersinia intermedia ATCC 29909]
 gi|238729467|gb|EEQ20982.1| Inner-membrane translocator [Yersinia intermedia ATCC 29909]
          Length = 350

 Score = 76.1 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 94/309 (30%), Gaps = 17/309 (5%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
              +       L++   A GL+ + G  G+LS      + +  Y+Y ++   +G  +   
Sbjct: 36  DSAMIGDFSYFLLWTFCAIGLAAMWGHGGILSFGQTAFFGLAGYTYGVMTLNFGDGVLST 95

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
                M       +            +    + +  +   ++++            +   
Sbjct: 96  WSGLVMALLVAAAVAAALGYLMFYGGVTGIFIGIVTLSFTLVLETFMSQTAGPQWAIGSA 155

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEI---FMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                  +  +           +  +     YY+++ +       +  L R+       +
Sbjct: 156 RLNGFNGMSGMPPLSLPWFGGELLTLEGNAFYYLIIVLLAGVYWAVRRLLRSDFGLTLAS 215

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           IR+N +    L   I   +L  F +     G++GA +      I+P     +   + +  
Sbjct: 216 IRENPRRAEMLGIDIRRYQLLVFVLGGVLSGLSGALYTLWGSYITPSSMGLTAAAMPVIW 275

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           V   G  ++      TA+L+ + +                    +     L+   L  V+
Sbjct: 276 VATAGRKNIFGTVVITALLVWLSQWLAIYG--------------SEYAMILLGAILLFVV 321

Query: 333 LMRSHSLLR 341
           L   + LL 
Sbjct: 322 LAAPNGLLP 330


>gi|150391809|ref|YP_001321858.1| inner-membrane translocator [Alkaliphilus metalliredigens QYMF]
 gi|149951671|gb|ABR50199.1| inner-membrane translocator [Alkaliphilus metalliredigens QYMF]
          Length = 291

 Score = 76.1 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 52/306 (16%), Positives = 95/306 (31%), Gaps = 26/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++Y + A G S+V G L L++ +    YA GA+  ++        +  LI  
Sbjct: 6   LVNGLALGMVYALIAVGYSLVFGILRLINFSHGSVYAFGAHMAMVFVGMEYGIVPALIFS 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAI-ATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             +       I  L     R       A LI +     I+     I  G           
Sbjct: 66  IILTGMLGIAIDKLALAPLRAKNSKRIAALITTIGVSYIIQNLLMIVYGSE--------- 116

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                   L  +       V       +++     L   +   +++T I  A R +  N 
Sbjct: 117 --TKFFPKLFDYGNINIGRVSIGTTQLFIVGVSLVLLVLLSYIIKKTKIGLAMRAVEQNH 174

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           KA   +   + F     F +  A   +AG   +     + P+M  F   +   S  +LGG
Sbjct: 175 KAASLMGIDVNFIVTFTFFLGGASAAIAGTLISGYYQVVYPNM-GFLAGLKAFSAAVLGG 233

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           +  L        I+              +   + F             + L  V+L++  
Sbjct: 234 IGILHGAIVGGLIVGVSESFAAAYLGGTYRDAVAF-------------VILIAVLLVKPT 280

Query: 338 SLLRLR 343
            L   +
Sbjct: 281 GLFGKK 286


>gi|158316502|ref|YP_001509010.1| ABC transporter related [Frankia sp. EAN1pec]
 gi|158111907|gb|ABW14104.1| ABC transporter related [Frankia sp. EAN1pec]
          Length = 940

 Score = 76.1 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 105/294 (35%), Gaps = 15/294 (5%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            +Y  S+ I+ L   +     ++V G  G++SL         A         +     + 
Sbjct: 348 DEYWQSLIIRGLALSLVLLSFTVVTGVGGMVSLAQAAFVT-AAGITAGWAVSHHWPFAVA 406

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + +   ++ A G+++ LP+ +  G  LA+ATL ++ + QN+  +   ++    G +V   
Sbjct: 407 LLLGTAVATAMGVLVSLPARRLGGLPLALATLALAYLCQNLFFQLSGVSRNDFGGWVLSP 466

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                  +                   M   L  +  L+  ++  L R++   A   +R 
Sbjct: 467 PALGPVDLAD--------------PRSMIIFLSVVLGLALLLVSNLIRSSSGRAMAALRS 512

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
            +    ++  +    K + FA+S+A  G  G   A+S  RI+   +     +  ++ V+L
Sbjct: 513 TEPGAVTIGISAGRTKTAVFALSAAIAGFGGVLLASSSGRITHLDYPVETGLFWLATVVL 572

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            G+   +    A        E+   +    +   +    +          I   
Sbjct: 573 FGVRRPAAAVIAGLSAAVSPEILSHVAETSYLPQVLSGLAAINLAQNSDGILAL 626



 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 86/301 (28%), Gaps = 10/301 (3%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             I    +   +Y + A G+ +   + G+ +          AY +V L    G+ +    
Sbjct: 6   NLIVGGAVAGGLYAILAAGVVLTYQTSGIFNFAHGAVAFATAYLFVQLNVTAGVPVVPAA 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIA-----TLIMSEIFQNILIKWKPITNGKAGIY 151
            +S ++      ++    +  R  +  +A      + +      + +      N    + 
Sbjct: 66  IISILVFAPLLGLLLDRLVYRRLAHAPLAVKIVVPIGLLIAVPGLCLFISSRLNLWFHLD 125

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           +A                  +    V+ +     V       +  + + L+RT +    R
Sbjct: 126 IAGIEDLFLIPGLGPTPKKTWTLGGVLLDSNQIAVFGAAVLTAVGLWVLLQRTRLGLQMR 185

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            + D +                ++ + S   G+AG   A      +P             
Sbjct: 186 AVVDRRSLAALRGVDPDRTSAVSWMLGSFLAGLAGVLVAPIFTLNTPVFTTVVLISTP-- 243

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
            V+     S+        ++  +  L  G   +  N       S ++    L+ +     
Sbjct: 244 AVVFARFRSMPLALAGGLLIGVLQNLIVGYADFAQNIS---GFSTSVPFILLLGLLFVFA 300

Query: 332 I 332
           +
Sbjct: 301 V 301


>gi|110635651|ref|YP_675859.1| inner-membrane translocator [Mesorhizobium sp. BNC1]
 gi|110286635|gb|ABG64694.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Chelativorans sp. BNC1]
          Length = 309

 Score = 76.1 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 50/313 (15%), Positives = 107/313 (34%), Gaps = 26/313 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89
           + +      IY + A G ++V G +G+++      + IGA+         + V+  +   
Sbjct: 8   LINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMIGAFISLAVFLILTSVLGFAFLP 67

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           + + ++I V+ + + A G  +   + +       +A LI +     +L  +  +     G
Sbjct: 68  VVLLIVIIVAMLFTSAWGWTVERVAYRPLRGSFRLAPLITAIGMSIVLQNFVQV---TQG 124

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             V      +   V  +       +  V        +++    L A+  L + RT++  A
Sbjct: 125 ARVKPLPPQIRGGVTLIEGSTEAGTIVVQLSYMQIIIIVTTVVLMAAFTLLISRTSLGRA 184

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +A   +AG  F      I      F   +  
Sbjct: 185 QRACEQDRKMAALLGVDVDRTISLTFVMGAALAAVAGFMFLLLYGVIDFY-IGFVAGVKA 243

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +     G     +  +  F               L 
Sbjct: 244 FTAAVLGGIGSLPGAMLGGLLIGLIEVFWSGYFSVEYKDVAAFS-------------ILA 290

Query: 330 LVILMRSHSLLRL 342
           +V++     LL  
Sbjct: 291 IVLIFLPSGLLGR 303


>gi|28871251|ref|NP_793870.1| high-affinity branched-chain amino acid ABC transporter permease
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|301383584|ref|ZP_07232002.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas syringae pv. tomato Max13]
 gi|302059989|ref|ZP_07251530.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas syringae pv. tomato K40]
 gi|302132072|ref|ZP_07258062.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|28854501|gb|AAO57565.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|330878873|gb|EGH13022.1| high-affinity branched-chain amino acid ABC transporter permease
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
 gi|330966511|gb|EGH66771.1| high-affinity branched-chain amino acid ABC transporter permease
           [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 307

 Score = 76.1 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 93/297 (31%), Gaps = 16/297 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91
           + +       Y + A G ++V G +G+++      Y IG+Y   +  +   +        
Sbjct: 11  LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70

Query: 92  -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +      + +++ A G  +   + +   +   +  LI +      L     ++ G    
Sbjct: 71  LMIAGFAAAIVVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNF 130

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            + + L          + F    S  V+       V +        + L++ R+ +  A 
Sbjct: 131 AIPNLL-------PGSLSFGPGGSQEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRAC 183

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F V +A   +A    +     I+     F   +   
Sbjct: 184 RACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVIN-PSAGFLVGLKAF 242

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  +LGG+ S+        +L         +    +  ++ F     +       I 
Sbjct: 243 TAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299


>gi|289676845|ref|ZP_06497735.1| inner-membrane translocator [Pseudomonas syringae pv. syringae FF5]
 gi|330896319|gb|EGH28414.1| inner-membrane translocator [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 307

 Score = 76.1 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 95/297 (31%), Gaps = 16/297 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91
           + +       Y + A G ++V G +G+++      Y IG+Y   +  +   +        
Sbjct: 11  LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70

Query: 92  -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +      + +++ A G  +   + +   +   +  LI +      L     ++ G    
Sbjct: 71  LMIAGFAAAIIVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNF 130

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            + + L          + F    +  V+       V +        + L++ R+ +  A 
Sbjct: 131 AIPNLL-------PGSLSFGPGGAEEVLISYMQIVVFVVTLVAMTGLTLFISRSRMGRAC 183

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F V +A   +A    +     I+P+   F   +   
Sbjct: 184 RACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVINPNA-GFLVGLKAF 242

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  +LGG+ S+        +L         +    +  ++ F     +       I 
Sbjct: 243 TAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299


>gi|121611126|ref|YP_998933.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121555766|gb|ABM59915.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 304

 Score = 76.1 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 98/300 (32%), Gaps = 15/300 (5%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            +  M A GL+++ G +G+++L     Y +GAY      +  G     ++          
Sbjct: 16  AMLFMLASGLTLIFGIMGVVNLTHGSFYMLGAYCAAFALAHTGSFAAAVVAALLGAGAYG 75

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
            +I      +              +    +L  +  I      + +          + ++
Sbjct: 76  LLIEFTVIRRLYQR----------DHLYQVLATFGLILFTNEAVSLLFGRRPPLVDMPAV 125

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
           ++     +    Y +     ++    ++  +   + RT +    R   D+++   +L   
Sbjct: 126 LQGAVPLAPGFEYPVARLAFIVIGALVALGLWWLVNRTRVGMLVRAGADDREMVSALGID 185

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           I       F + +   G+AG   A                I    ++++GG+ S+     
Sbjct: 186 IRKLYTLVFGLGAVLCGLAGVMAAPLLAV--EIGMGERVLITTFVVIVIGGVGSVRGALA 243

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL---MVIALFLVILMRSHSLLRLR 343
              ++  V  L          SLL  + +  +        + + + LV+++R   L   R
Sbjct: 244 GALLVGMVDSLGRAFLPQLLESLLTPEVATPLAAGLASASIYLLMALVLIVRPLGLFSSR 303


>gi|115526217|ref|YP_783128.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115520164|gb|ABJ08148.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 433

 Score = 76.1 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 50/329 (15%), Positives = 115/329 (34%), Gaps = 32/329 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +   +L + L    S     +    I I ++FA   +I++G  G+LS    + Y +G 
Sbjct: 24  MWLGVAVLLIVLPHVFSSGGSLTTFSLIGISIIFALSYNILLGQTGMLSFGHAVYYGLGG 83

Query: 79  Y-----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +       +I G+++ + + L+  +          ++G    +  G   A+ +L ++E+ 
Sbjct: 84  FLAIHAINLIGGAKWPIPLPLVPVIGGATGLFFAALIGWVMTQRSGTAFAMISLGLAELV 143

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
            +  +  +    G+AGI              +  + FR        +I +YY++     +
Sbjct: 144 ASSALILRSFFGGEAGIS------------ANRTKMFRVFDFSFGPQIQIYYLVAAWTLI 191

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  ++  L RT +      +RDN +    +       +  AF  +  F G+AG+  A + 
Sbjct: 192 AIVLMYALTRTPLGRMCNAVRDNPERVQFVGYDPHVVRYLAFCFAGLFAGVAGSLAAINF 251

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           +  +       ++  V+    +GG+            +  +      +            
Sbjct: 252 EIANSAYLGAVQSGTVLFAAYIGGIGFFIGPIVGAIFVTLLSLGLSDV------------ 299

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                       +    V++     L  L
Sbjct: 300 ---TSVWQLYFGLFFIGVVMFTPGGLTGL 325


>gi|83311424|ref|YP_421688.1| ABC-type branched-chain amino acid transport system, permease
           component [Magnetospirillum magneticum AMB-1]
 gi|82946265|dbj|BAE51129.1| ABC-type branched-chain amino acid transport system, permease
           component [Magnetospirillum magneticum AMB-1]
          Length = 316

 Score = 75.7 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 55/288 (19%), Positives = 121/288 (42%), Gaps = 14/288 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             ++ L + +FA   ++++G +GLLS    + +   AY        +GL+  L I +   
Sbjct: 33  FLMKGLCFGLFAAAFNLLLGYVGLLSFGHAMFFGWSAYVTAYAAKEWGLTPELAILLGVA 92

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           ++ A G ++G  +++ +G Y A+ TL ++++   + ++                +     
Sbjct: 93  LATALGAVVGWLAIRRQGIYFAMITLALAQLGFFVAVQA--------------PMTHGED 138

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++ + R   F    +   + MYY +L +  LS   +  +  +      + IRDN+    
Sbjct: 139 GIQGVPRGMLFGLIDLSNTMAMYYFVLAVFVLSLLFLHRVVNSPFGQVLKAIRDNEPRAI 198

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   KL AF +SSAF G+AG+  +      S     +  +  V+ + +LGG+ ++
Sbjct: 199 SLGYEVTRYKLIAFVLSSAFAGLAGSLKSLVFQLASLADVSWHMSGEVVLMTLLGGVGTV 258

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
                   +++ + +   G+  +             +   + M+  L 
Sbjct: 259 LGPMVGAFLVVAIQDFFAGIGSWVIIIQGIIFVVCVLLFRSGMIGVLA 306


>gi|154247823|ref|YP_001418781.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154161908|gb|ABS69124.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 305

 Score = 75.7 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 101/313 (32%), Gaps = 30/313 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL---------GSRYG 89
           + +      IY + A G ++V G +G+++      + + A+  +I           S   
Sbjct: 8   LINGLTLGSIYGLIAIGYTMVFGIIGMVNFAHGDVFMVSAFIGLICVLLLTTVLGMSSIF 67

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L + + + V+ + +G     +   + +       +A +I +     +L  +  +  G   
Sbjct: 68  LILAITLVVAMVFTGLVSWAIERVAYRPLRGSFRLAPMISAIGMSILLSNFVQVAQGPRN 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             +          V  +I         V        +++    L A     +++T++  A
Sbjct: 128 KPLPP-------MVPDVIVVMERNGYQVTLAYKQIIIMVVTATLLAGFWWLVQKTSLGRA 180

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +A   +AG  +      ++     F   +  
Sbjct: 181 QRACEQDRKMAALLGVNVDRTISLTFVIGAALAAVAGVMYLMYYGVVNF-ADGFVPGVKA 239

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +  L        +  +  F               L 
Sbjct: 240 FTAAVLGGIGSLPGAVLGGLLIGLIETLWSAYFSIEYKDVAAFS-------------ILV 286

Query: 330 LVILMRSHSLLRL 342
           + ++     LL  
Sbjct: 287 VTLIFLPQGLLGR 299


>gi|239627687|ref|ZP_04670718.1| inner-membrane translocator [Clostridiales bacterium 1_7_47_FAA]
 gi|239517833|gb|EEQ57699.1| inner-membrane translocator [Clostridiales bacterium 1_7_47FAA]
          Length = 293

 Score = 75.7 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 92/305 (30%), Gaps = 26/305 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +       Y + A G ++V G L L++      + +  Y  +   +      ++ IPV+
Sbjct: 11  LTGISLGGAYALIAIGYTLVYGILRLINFAHGDIFMMAGYFMIFAMASLP--WFIAIPVT 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++   G+ +   + +       ++ +I +     +L                +  +  
Sbjct: 69  LIVTVVLGVTIERVAYRPLRSSPRMSVMISAIGVSYLLQNLATYLFTALPKGYPEIPFLK 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                            +      +   +    L   +IL +  T I  A R +  + + 
Sbjct: 129 RIYQ----------IGGLSASFVTFLTPVLTLVLVYLLILLINHTKIGMAMRAVSKDYET 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   I       FAV S   G+    +   R  + P        +      + GG+ 
Sbjct: 179 ASLMGIKINKTISFTFAVGSLLAGIGSILYFTDRMTVFPFS-GALPGLKCFVAAVFGGIG 237

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        IL         M    F+    F             I L +++L+R   L
Sbjct: 238 SIPGAVIGGFILGLGETALVAMGQSTFSDAFTF-------------ILLIVMLLIRPTGL 284

Query: 340 LRLRT 344
              +T
Sbjct: 285 FGEKT 289


>gi|237798832|ref|ZP_04587293.1| high-affinity branched-chain amino acid ABC transporter permease
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331021685|gb|EGI01742.1| high-affinity branched-chain amino acid ABC transporter permease
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 307

 Score = 75.7 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 86/290 (29%), Gaps = 2/290 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   +  +   +     +P+
Sbjct: 11  LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
             +   A  +I+                   + +   I  I           +      +
Sbjct: 71  LMIAGFAASIIVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNF 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +       + F    +  V+       V +        + L++ R+ +  A R   ++ 
Sbjct: 131 AIPNLFPGSLSFGPGGAQEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRACRACAEDM 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F V +A   +A    +     I+     F   +   +  +LGG
Sbjct: 191 KMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVIN-PSAGFLVGLKAFTAAVLGG 249

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           + S+        +L         +    +  ++ F     +       I 
Sbjct: 250 IGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299


>gi|66047073|ref|YP_236914.1| inner-membrane translocator [Pseudomonas syringae pv. syringae
           B728a]
 gi|63257780|gb|AAY38876.1| inner-membrane translocator [Pseudomonas syringae pv. syringae
           B728a]
          Length = 307

 Score = 75.7 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 95/297 (31%), Gaps = 16/297 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91
           + +       Y + A G ++V G +G+++      Y IG+Y   +  +   +        
Sbjct: 11  LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70

Query: 92  -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +      + +++ A G  +   + +   +   +  LI +      L     ++ G    
Sbjct: 71  LMIAGFAAAIIVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNF 130

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            + + L          + F    +  V+       V +        + L++ R+ +  A 
Sbjct: 131 AIPNLL-------PGSLSFGPGGAEEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRAC 183

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F V +A   +A    +     I+P+   F   +   
Sbjct: 184 RACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVINPNA-GFLVGLKAF 242

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  +LGG+ S+        +L         +    +  ++ F     +       I 
Sbjct: 243 TAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299


>gi|329911205|ref|ZP_08275459.1| putative amino acid transmembrane lipoprotein ABC transporter
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327545983|gb|EGF31070.1| putative amino acid transmembrane lipoprotein ABC transporter
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 293

 Score = 75.7 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 54/305 (17%), Positives = 115/305 (37%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y +FA G ++V G LG+++L+    + +G+Y+ ++L  +  L +WL +  
Sbjct: 6   LINALSLGSVYALFALGFTLVFGVLGVINLSHGAIFMLGSYTALLLVEKMALPLWLALLA 65

Query: 99  SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           + +++G  G+++         + +   ++ +I S     +L        G          
Sbjct: 66  AMLVAGLIGLLVDYLVLRPLRKRNAPHLSPMIASIGVAIMLTNLAQGLFGAENKRFP--- 122

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     I         +        ++     L   +++ +RRT +  A R I ++
Sbjct: 123 -------VGTIPEQSISFGDLHVTAVQIGIVAISFLLMIVLLVVMRRTQLGRALRAIAES 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            KA   L   +    L     ++A  G+AG     S + ISP M +   +  + +++ILG
Sbjct: 176 PKAAALLGINVEGLFLLTSFTAAALGGVAGVLVGLSFNAISPFMGQPMLHKGI-AVIILG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM  +         L     +        F   + F               LF+++L+R 
Sbjct: 235 GMGDIRGAMIGGLFLGFAEVMSVAYLSSDFRDAVAFG-------------LLFVILLVRP 281

Query: 337 HSLLR 341
             +  
Sbjct: 282 SGMFG 286


>gi|218660483|ref|ZP_03516413.1| inner-membrane translocator [Rhizobium etli IE4771]
          Length = 300

 Score = 75.7 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 96/304 (31%), Gaps = 17/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G +G+++      + +G ++ +I+          L   
Sbjct: 8   LFNGLTLGSIYGLVAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLVLTSIFAGLPVA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +++     ++      +  + +A   L  S     ++            I V      
Sbjct: 68  ILLLAMLVVAMLMTSLWNWTIERVAYRPLRGSFRLAPLITAIGMSIVLSNFIQVTQGPRN 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +    +    +   +    +++    L A+    + RTA+  A R    ++K
Sbjct: 128 KPI---PPMVSSVYQFGNISVSLKQIIIIVITAVLLAAFWYIVNRTALGRAQRATEQDRK 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       F + +A   +AG  +       S     F+  +   +  +LGG+
Sbjct: 185 MAALLGVNVDQTISITFVMGAALAAVAGTMYLMYYGVASF-ADGFTPGVKAFTAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        ++  +  L        +  +  F               L  V++ +   
Sbjct: 244 GSLPGAVLGGLMIGLIESLWSAYFTIAYKDVATF-------------AILAFVLIFKPTG 290

Query: 339 LLRL 342
           +L  
Sbjct: 291 ILGR 294


>gi|294851030|ref|ZP_06791706.1| amino acid ABC transporter [Brucella sp. NVSL 07-0026]
 gi|294821673|gb|EFG38669.1| amino acid ABC transporter [Brucella sp. NVSL 07-0026]
          Length = 288

 Score = 75.7 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 72/184 (39%), Positives = 102/184 (55%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + ++      VYP+L+   LG   S K++D+ G+QILIYVM AWGL+IVVG  GLL L  
Sbjct: 103 FSRLGVAFLFVYPVLIVAALGWQGSLKWVDNFGVQILIYVMLAWGLNIVVGLAGLLDLGY 162

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           V  YA+GAYSY IL S +GLS W+L+P++ +++   G+I+G P L+ RGDYLAI TL   
Sbjct: 163 VAFYAVGAYSYAILSSYFGLSFWVLLPIAGLLAATWGIILGFPVLRLRGDYLAIVTLAFG 222

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           EI + +LI W  +T G  GI    +  F G    +    F     +      +    +  
Sbjct: 223 EIIRLVLINWTDLTRGTFGISGIAKATFFGLPFNASKDGFAAHFGWPSQRRIINSFSITS 282

Query: 191 CFLS 194
               
Sbjct: 283 FSCW 286


>gi|84496562|ref|ZP_00995416.1| putative branched chain amino acid transport permease [Janibacter
           sp. HTCC2649]
 gi|84383330|gb|EAP99211.1| putative branched chain amino acid transport permease [Janibacter
           sp. HTCC2649]
          Length = 307

 Score = 75.7 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 89/305 (29%), Gaps = 10/305 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A G ++V G + L++      + IG++   +            + V
Sbjct: 8   IVNGLTIGSLYALIAVGYTVVYGIVQLINFAHGEVFMIGSF-GALATWTVLFKGQTGLWV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++     ++  L ++                      I           ++       
Sbjct: 67  LPIMILGAVVVSVLTAVVMERLAYRPLRNAPRLAPLITAIGISVFLQEAVRLFYPGAKSK 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L      ++         +  +    + +  +   +  +  ++ RT +    + +  +  
Sbjct: 127 LVFPDIDVVTGPALSLGGLTIQRAAMFTVGALVVAAFLLWFFVNRTRLGQGMQAVSQDPD 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    + AFA+ +A   +AG         I   M  F   +   +  +LGG+
Sbjct: 187 TAQLMGINVNRIIVIAFALGAALAAVAGVAQGLLNSNIDFRM-GFLAGLKAFTAAVLGGI 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++         L     +        F          +        + L LV++ R   
Sbjct: 246 GNIQGAVVGGLTLGIAESMATQFIPGQFGG--------SAWKDVWAFVLLILVLVFRPQG 297

Query: 339 LLRLR 343
           LL  R
Sbjct: 298 LLGAR 302


>gi|296161884|ref|ZP_06844685.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295887903|gb|EFG67720.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 291

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 99/304 (32%), Gaps = 29/304 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-LGSRYGLSIWLLIP 97
           I ++     +  M A GL++V G + +++L       IGAY+  +        + WL + 
Sbjct: 4   ILNVASYACVLAMIALGLAVVFGMMDIVNLAHAEWVTIGAYALAVAQAVGGKEAFWLALF 63

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           V+ ++  A G  +    ++   D      L+ +     IL K   +  G   + V     
Sbjct: 64  VAPVVGAALGWCLERFIIRLLYDRPLDT-LLATYAVSLILQKALELVFGTQPMLVYAPFS 122

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                          P     Y  +  +V+     ++A   L   RT      R +  + 
Sbjct: 123 ------------GAVPVPGGSYPAYRIFVIGVALTVTAGCWLLFARTRFGTQLRAVIQHP 170

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +           AF   +A   +AG   A      S      S       +++LGG
Sbjct: 171 AMAEATGIDTRCLNRIAFCGGAALASLAGVLVAPMVSVESH--LGVSYLAKAFFVIVLGG 228

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S++     +A++     L          S              ++++   +VI  R  
Sbjct: 229 IGSIAGSILGSAVIGTAETLLSYRVDPSLASA-------------MVLVLSIVVIRFRPQ 275

Query: 338 SLLR 341
            L+ 
Sbjct: 276 GLIP 279


>gi|238786874|ref|ZP_04630675.1| Inner-membrane translocator [Yersinia frederiksenii ATCC 33641]
 gi|238725242|gb|EEQ16881.1| Inner-membrane translocator [Yersinia frederiksenii ATCC 33641]
          Length = 352

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/325 (12%), Positives = 98/325 (30%), Gaps = 17/325 (5%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V   +++            +       L++   A GL+ + G  G+LS      + +  Y
Sbjct: 22  VALLVVMAALALPLVVDSAMIGDFSYFLLWTFCAIGLAAMWGHGGILSFGQTAFFGLAGY 81

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y ++   +G  +        +       +            +    + +  +   ++++
Sbjct: 82  TYGVMTLNFGDGVLSTWSGLIVALLVAAAVAAALGYLMFYGGVTGIFIGIVTLSFTLVLE 141

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI---FMYYVLLGMCFLSAS 196
                       +          +  +           +  +     YY+++ +      
Sbjct: 142 TFMSQTAGPHWAIGSARLNGFNGMSGMPPLSLPWFGGELLTLEGNAFYYLIIVLLAGVYW 201

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L R+       +IR+N +    L   I   +L  F +     G++GA +      I
Sbjct: 202 GVRRLLRSNFGLTLASIRENPRRAEMLGIDIRRYQLLVFVLGGVLSGLSGALYTLWGSYI 261

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +P     +   + +  V   G  ++      TA+L+ + +                    
Sbjct: 262 TPSSMGLTAAAMPVIWVATAGRKNIFGTVIITALLVWLSQWLAIYG-------------- 307

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
           +     L+   L  V+L   + LL 
Sbjct: 308 SEYAMILLGAILLFVVLAAPNGLLP 332


>gi|256397008|ref|YP_003118572.1| inner-membrane translocator [Catenulispora acidiphila DSM 44928]
 gi|256363234|gb|ACU76731.1| inner-membrane translocator [Catenulispora acidiphila DSM 44928]
          Length = 388

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 86/267 (32%), Gaps = 9/267 (3%)

Query: 54  WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113
            G  ++ G LGL+S    +  A+GAYS  +      L +     ++ +I      ++G  
Sbjct: 55  VGYDLLFGRLGLMSFGHALYVAVGAYSAELAMKDSHLPLAAAALLAIVIGAVVSTLLGAV 114

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
           SLK          +         ++       G   +    +       +          
Sbjct: 115 SLK---------GVGNLGTVGFAMVTLAFAQAGSILVGRDPKTTGGEEGLPLTTEKVPSA 165

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
              V+  + +Y++ L    L   ++ WL  + I   W+ IRDN++    L       +L 
Sbjct: 166 LVGVVNTVNLYWLALAYLVLVCGVVWWLTGSRIGKVWQAIRDNERRAEVLGLNPFRYQLG 225

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
           AF ++       G          +P+       + ++ +V+LGG  +         +   
Sbjct: 226 AFVLAGTLGAAGGVVHLLVTAGATPETTTTDFTLALLVMVVLGGSGTRWGPVLGGVLYTL 285

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRH 320
           +      +      + L       +  
Sbjct: 286 LDHRLGAVATSDAVAGLPDVLRIPLSQ 312


>gi|240140119|ref|YP_002964596.1| putative branched-chain amino acid ABC transporter, permease
           protein [Methylobacterium extorquens AM1]
 gi|240010093|gb|ACS41319.1| putative branched-chain amino acid ABC transporter, permease
           protein [Methylobacterium extorquens AM1]
          Length = 308

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 95/301 (31%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   +YV+ A GL+I+ G +G++++       +GAY   +  + +   +  L      +
Sbjct: 22  LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTYLCSTFFQTYLPSLFGAYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           + A   +            L     +       +L  W      +           +G  
Sbjct: 82  AMALAFLASGAMGMLVEWAL--IRHLYKRPLDTLLATWGLSLILQQAYRTIFGPREVGVE 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           + S +      +  +  +I   +V+     ++  + + + R+      R +  N+    +
Sbjct: 140 LPSWMMGSIPVTDSIEVQINGLFVIAVTAVITVGVAVLMYRSRFGAQIRAVMSNRPMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +         + F +     G+AG+ F       +         +    IV+ GG  SL 
Sbjct: 200 VGIDTEKVDRTTFGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLIVVFGGAASLL 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++A+  ++++R   L  L
Sbjct: 258 GTIASAFSISQTQSTLEFFLSGSMAK-------------VLTLLAVVGILMLRPQGLFTL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|312199216|ref|YP_004019277.1| inner-membrane translocator [Frankia sp. EuI1c]
 gi|311230552|gb|ADP83407.1| inner-membrane translocator [Frankia sp. EuI1c]
          Length = 988

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 54/316 (17%), Positives = 120/316 (37%), Gaps = 19/316 (6%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           +   L    +     +  I   I  +    L +V G  G +SL  +     GA+    L 
Sbjct: 334 VIGVLALLLTHGSWRAAVIGTFIAAIIGLSLVVVTGYAGQVSLAQLALAGAGAFLLSGLT 393

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
             + +       ++A+ +   G+++GLP+L+ RG  L + TL ++   + +  +   I +
Sbjct: 394 QSWHVPFPFAPLLAALGATVLGVVIGLPALRLRGLTLGVVTLALAYAIEAVWFRNTQIVS 453

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
            + G     +L+ L   + S   F R     ++  + +           A  +  LR +A
Sbjct: 454 TEGGKVTQPKLFGLDLQIGSGHAFPRLAFGLLVLVVLV---------AVAFGVARLRMSA 504

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           + +A   +R N+++   +   ++  K+ +FA+ S   G+ GA  A     ++ D +    
Sbjct: 505 LGSAMLAVRANERSAAGIGINVVRIKVISFAIGSFIAGLGGALLAYRFGVVTFDSYSAVG 564

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
            + ++++  L G+TS+     A  +           +       +          + +  
Sbjct: 565 GLSLLTVAYLAGVTSVWGGVNAGIL----------SSSGIIFIAMDRWVHLGTWFSVITG 614

Query: 326 IALFLVILMRSHSLLR 341
           I L   I+     +  
Sbjct: 615 IGLLAAIVGHPEGIAS 630



 Score = 44.5 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 37/274 (13%), Positives = 83/274 (30%), Gaps = 10/274 (3%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G+++          AY+Y  L     L     +P +  +                   L
Sbjct: 31  SGVINFATGAIALYVAYTYADLRDGQLLVPIPGLPTTVGLGTDSLGFFPAALGALLIGAL 90

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGI------YVADRLYFLGTTVRSLIRFFRFPSSF 176
             A L      + +            G+       +  R+     +V ++    R+    
Sbjct: 91  LGALLYAVVFRKLLDAPPLAKAVASLGVLVVIQSVMVIRVGVAPVSVEAIFPADRWKLGS 150

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
           ++     +Y+ + +  L+  +    R T      R    +Q   +    +     L+ + 
Sbjct: 151 LLVLSDRFYLAVAVIVLTLVLTAVFRFTRFGLLTRATASSQTGAYVSGVSANRVALTNWM 210

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           +S A  G AG   A                +  ++  ++GG  +L     A  ++  V  
Sbjct: 211 ISCAVAGAAGILIAPVSPLAPTT--YTLFVVPALAAAVVGGFQNLVPAVIAGLVIGMVQ- 267

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
               ++    +S +    S  +    ++V+AL  
Sbjct: 268 -AEALSLAAQHSWMPRTGSAELVPLIVIVVALLA 300


>gi|189024869|ref|YP_001935637.1| High-affinity branched-chain amino acid transport system permease
           protein LIVH [Brucella abortus S19]
 gi|237816158|ref|ZP_04595153.1| High-affinity branched-chain amino acid transport system permease
           protein LIVH [Brucella abortus str. 2308 A]
 gi|254689945|ref|ZP_05153199.1| High-affinity branched-chain amino acid transport system permease
           protein LIVH [Brucella abortus bv. 6 str. 870]
 gi|261214752|ref|ZP_05929033.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya]
 gi|297249050|ref|ZP_06932758.1| branched-chain amino acid transport system permease [Brucella
           abortus bv. 5 str. B3196]
 gi|189020441|gb|ACD73163.1| High-affinity branched-chain amino acid transport system permease
           protein LIVH [Brucella abortus S19]
 gi|237788620|gb|EEP62833.1| High-affinity branched-chain amino acid transport system permease
           protein LIVH [Brucella abortus str. 2308 A]
 gi|260916359|gb|EEX83220.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya]
 gi|297174183|gb|EFH33540.1| branched-chain amino acid transport system permease [Brucella
           abortus bv. 5 str. B3196]
          Length = 307

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 103/313 (32%), Gaps = 33/313 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89
           + +      IY + A G ++V G +G+++      + +GA+         +  I      
Sbjct: 13  VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 72

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L + L++ V+ +++G C   +   + +       +A LI +      L  +  +T G   
Sbjct: 73  LMLLLMMIVAMLLTGLCSWAIERVAYQPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 132

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             V   L                  S V   +    V++    L       + RT++  A
Sbjct: 133 KPVPQLLNGSYELF----------GSGVTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 182

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +    +AG  + +    IS     F   +  
Sbjct: 183 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 241

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +  L        +  +  F               L 
Sbjct: 242 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 288

Query: 330 LVILMRSHSLLRL 342
           +V++     +L  
Sbjct: 289 IVLIFMPSGILGR 301


>gi|302187250|ref|ZP_07263923.1| inner-membrane translocator [Pseudomonas syringae pv. syringae 642]
          Length = 307

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 95/297 (31%), Gaps = 16/297 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91
           + +       Y + A G ++V G +G+++      Y IG+Y   +  +   +        
Sbjct: 11  LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70

Query: 92  -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +      + +++ A G  +   + +   +   +  LI +      L     ++ G    
Sbjct: 71  LMIAGFAAAIIVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNF 130

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            + + L          + F    +  V+       V +        + L++ R+ +  A 
Sbjct: 131 AIPNLL-------PGSLSFGPGGAQEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRAC 183

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F V +A   +A    +     I+P+   F   +   
Sbjct: 184 RACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVINPNA-GFLVGLKAF 242

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  +LGG+ S+        +L         +    +  ++ F     +       I 
Sbjct: 243 TAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299


>gi|297626280|ref|YP_003688043.1| High-affinity branched-chain amino acid transport system permease
           protein BraE (livM, LIV-I protein M) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296922045|emb|CBL56609.1| High-affinity branched-chain amino acid transport system permease
           protein BraE (livM, LIV-I protein M) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 337

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 75/316 (23%), Positives = 123/316 (38%), Gaps = 43/316 (13%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG--LSIW 93
             Y       I I ++ A  L+++ G  G  SL      AIGAY   ++  +        
Sbjct: 48  NDYRLITIATICINIVLATSLNLITGFTGQFSLGHAGFMAIGAYVTALVTIQIDSVWGFV 107

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L +   A+++   G+++GLP+L+ RGDYLAI TL M+EI + +L+    +TNG AG+   
Sbjct: 108 LGLLAGALLASLVGLLIGLPTLRLRGDYLAIVTLGMAEIIRIVLLNL-KVTNGAAGLQGI 166

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            +                            +  L  +   S  +I     +        +
Sbjct: 167 PQF-------------------------VNWTWLFILTAGSVVLISNYLHSRHGRDSIAV 201

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R+++ A  S+       K  +F V + F G+AG  +A+    I PD F F +++ ++ IV
Sbjct: 202 REDEIAAESIGVNSTRTKTMSFMVGAFFGGIAGGMYASFFYFIKPDTFNFMKSVDILVIV 261

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ SLS    A  +L  V  L                    +               
Sbjct: 262 VLGGLGSLSGSVIAAILLAIVSTLLQPFPEIRMILYALILILIMI--------------- 306

Query: 334 MRSHSLLRLRTPSNFL 349
            R   L+  R  S  L
Sbjct: 307 FRPQGLMGSRELSVKL 322


>gi|146283529|ref|YP_001173682.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas stutzeri A1501]
 gi|145571734|gb|ABP80840.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas stutzeri A1501]
          Length = 335

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 112/337 (33%), Gaps = 34/337 (10%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            KI   + +V  LL  L +             +++L + +FA   ++++G  GLLS    
Sbjct: 29  QKIFYAVLLVIALLAPLAVYPVF--------LMKLLCFALFACAFNLLLGYAGLLSFGHA 80

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +A G Y    + S Y      L  ++  ++      +       R         +   
Sbjct: 81  AFFATGGYITGYMLSSYSGLSTELGILAGTLASTVLGALFGMLAIRRQGIYFAMITLALA 140

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                +    P T G+ G+    R                F    +   + MYY +L + 
Sbjct: 141 QLVFFVFVQAPFTGGENGLQGVPR-------------GHLFGLVDMKNNMAMYYFVLAVF 187

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +  ++I     +      + IR+N+    SL   +   KL AF +S+A  G+AGA    
Sbjct: 188 VIGFAVIQRTIHSPYGQVLKAIRENEPRAVSLGYNVDRHKLLAFVISAALAGLAGATKTV 247

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                S     +  +  VI + +LGG+ ++        +++ +                 
Sbjct: 248 VFQLASLTDAHWHMSGEVILMTLLGGVGTILGPLVGATVVVTLQSSLS------------ 295

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
            +         ++ +   L +L+    ++        
Sbjct: 296 -NGPLGEWVHVILGVIFVLCVLLFRSGIVGWLERLVK 331


>gi|107029152|ref|YP_626247.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054]
 gi|116687020|ref|YP_840267.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
 gi|105898316|gb|ABF81274.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652735|gb|ABK13374.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 295

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 114/308 (37%), Gaps = 19/308 (6%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             ++  +     +Y   A GL++  G  GL++   +    +GAY+  I  S+ G  +   
Sbjct: 2   SSFVIHLLTVGCLYATMALGLNLQAGYAGLVNFGFIAFSGLGAYAAGI-ASQLGWPLPSA 60

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + ++   +GA  +++     +   DY  IATL ++EI + I +    +T G  GI     
Sbjct: 61  LALALAAAGALAIVVARLGRQLSADYWGIATLAIAEILRTIALNESWLTGGAQGIGGIAP 120

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           L+       +               +    V  G   L+ +    L  +    A + +R+
Sbjct: 121 LFPGLRAPWAD--------------LAFLAVTAGCLALTYATYRRLTASRFGRALKVMRE 166

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
                       +  K  A    +    +AGA  A     + PD    SE   + ++V++
Sbjct: 167 EPALAVCFGYDPLALKTRASIAGALPAALAGALAAWYIGYVGPDAMIASETFALWTVVMV 226

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S   +   T I+    +    +  +  + L             L+ + L   +L R
Sbjct: 227 GGLGSHVGVLVGTLIV----QAVYALAPFLKDWLGVGSDLTGAVRLGLVGLMLLACVLWR 282

Query: 336 SHSLLRLR 343
            H L+  R
Sbjct: 283 PHGLVPER 290


>gi|71737923|ref|YP_273672.1| high-affinity branched-chain amino acid ABC transporter permease
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|257486680|ref|ZP_05640721.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289626714|ref|ZP_06459668.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289648002|ref|ZP_06479345.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas syringae pv. aesculi str. 2250]
 gi|298488780|ref|ZP_07006808.1| high-affinity branched-chain amino acid transport system permease
           protein [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|71558476|gb|AAZ37687.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|298156698|gb|EFH97790.1| high-affinity branched-chain amino acid transport system permease
           protein [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|330867290|gb|EGH01999.1| high-affinity branched-chain amino acid ABC transporter permease
           [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330984887|gb|EGH82990.1| high-affinity branched-chain amino acid ABC transporter permease
           [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|331010152|gb|EGH90208.1| high-affinity branched-chain amino acid ABC transporter permease
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 307

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 93/297 (31%), Gaps = 16/297 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91
           + +       Y + A G ++V G +G+++      Y IG+Y   +  +   +        
Sbjct: 11  LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70

Query: 92  -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +      + +++ A G  +   + +   +   +  LI +      L     ++ G    
Sbjct: 71  LMIAGFAAAIVVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNF 130

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            + + L          + F    +  V+       V +        + L++ R+ +  A 
Sbjct: 131 AIPNLL-------PGSLSFGPGGAQEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRAC 183

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F V +A   +A    +     I+     F   +   
Sbjct: 184 RACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVIN-PSAGFLVGLKAF 242

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  +LGG+ S+        +L         +    +  ++ F     +       I 
Sbjct: 243 TAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299


>gi|332285151|ref|YP_004417062.1| inner-membrane translocator [Pusillimonas sp. T7-7]
 gi|330429104|gb|AEC20438.1| inner-membrane translocator [Pusillimonas sp. T7-7]
          Length = 314

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 57/328 (17%), Positives = 125/328 (38%), Gaps = 26/328 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L V+  +L  L      +  +   +  +ILI  + A   +++ G  G+LS      +
Sbjct: 4   VITLGVLVFVLALLVALPWIAPFFYIFIATEILILGLLAASFNLIFGYTGMLSFGHAAFF 63

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G+Y+  +L       +   + V+ +      +++G  S++    Y ++ TL    +  
Sbjct: 64  GVGSYATAMLLQSMQWPLLACLLVAVLAGALLALVIGFFSVRLNEVYFSMLTLAFGMMVY 123

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++ +W+ +TNG  GI                          +      Y+V+L +  L+
Sbjct: 124 AVVHQWRSVTNGSDGIAGFMVQS-----------LGLGIDVTLGNPAVYYHVVLVIVVLA 172

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +++  + R++     R IR N +        +   +L+AF ++ AF G+AG   A    
Sbjct: 173 TALLYLICRSSFGLILRAIRQNPERVAFCGLNVRSYRLAAFTIAGAFAGLAGGLMAPFLR 232

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             SP++  +S +   + + ILGG            + + +      M   +         
Sbjct: 233 IASPELVHWSMSAEPVLMSILGGTGYFLGPFFGAGMFVLLETWITSMTHAW--------- 283

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   ++ I L L+++     +L  
Sbjct: 284 ------MLVLGIILALMVMFFRRGVLGT 305


>gi|254501258|ref|ZP_05113409.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222437329|gb|EEE44008.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 342

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/335 (11%), Positives = 102/335 (30%), Gaps = 17/335 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L +   +L +  +    LL +   +T     +  + + ++I+ + A GL++V G + +++
Sbjct: 19  LVQKLPVLLVPVLALAGLLAIGNPSTWLTLTVAGLAMGMMIF-IMASGLTVVFGLMDVIN 77

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                   +GA+    + +           +  + +    ++  +      G       +
Sbjct: 78  FGHGAFVTVGAFVGFTVLAWLAGWTASPSVLLNLSALLVAILAAMLITGGLGYAFERVIV 137

Query: 128 I-MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
             +       ++           +             R               E +    
Sbjct: 138 KPVYGEHLKQILVTMGGLIVAQQMIHVVWGPDEMHLSRPEALQGSIVLGDAAIEKYRLVA 197

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +     L  ++   L+ T I    R   +N +   +L   +    L  F   SA  G+ G
Sbjct: 198 VAIGLALFLAMRHILKNTKIGLLVRAGVENGEMVEALGYRVRRLFLIVFMTGSALAGLGG 257

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             +   ++ I+  M      ++V  +VI+GG+ S+        ++  +      +     
Sbjct: 258 VMWGLYQETITAHM-GSEIMVLVFIVVIIGGLGSVEGCFIGALLVGLLANYTAFLA---- 312

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                             +  +  V++ R   L  
Sbjct: 313 ----------PKVALISTIALMVAVLMWRPQGLYP 337


>gi|116071878|ref|ZP_01469146.1| putative membrane protein of ABC transport system [Synechococcus
           sp. BL107]
 gi|116065501|gb|EAU71259.1| putative membrane protein of ABC transport system [Synechococcus
           sp. BL107]
          Length = 375

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/344 (12%), Positives = 95/344 (27%), Gaps = 31/344 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             L+ +   ++  +    +    +  ++  + L   + A G+ ++ G  GLLSL   I +
Sbjct: 10  WPLVILWVLIIAAIVAAPSVLPVFRLNLLGRFLALAIVALGIDLIWGFTGLLSLGQGIFF 69

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+G Y+  +                         +           +  +A  ++  +  
Sbjct: 70  ALGGYAAAMYLQLNSSGDLPNAIPEFFGLYGVDRLPAFWQPFHSPWFTLVAIWLVPAVLA 129

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTV-----------------RSLIRFFRFPSSFV 177
            +L         K   +       L                       +   F       
Sbjct: 130 AVLGNLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDVTELFGQMVGSA 189

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
             +   ++V   M  L+   + W+ R    +    IRD++             K   FA+
Sbjct: 190 EMQRGFFWVTAVMVILAWLSVRWVVRGRFGDVLIAIRDDEPRLRFAGYNPTLFKTIVFAI 249

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           +    G+ GA +      +SP       +I ++  V +GG  +L         +     L
Sbjct: 250 AGGLAGIGGALYTVQSGIVSPQYMTVPFSIEMVIWVAVGGRGTLVGAILGAVAINYAKSL 309

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                            +       +      LV+      ++ 
Sbjct: 310 VSE--------------AMPQSWLFIQGGLFILVVTALPEGVIG 339


>gi|317126141|ref|YP_004100253.1| inner-membrane translocator [Intrasporangium calvum DSM 43043]
 gi|315590229|gb|ADU49526.1| inner-membrane translocator [Intrasporangium calvum DSM 43043]
          Length = 369

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 68/329 (20%), Positives = 131/329 (39%), Gaps = 24/329 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L++   +  ++A+V   L  L +       Y+ ++     +++      + + G +G +S
Sbjct: 15  LSRRAVVGFVIALVVLYLAPLVIP---ISAYLHNVIGLTFMFMAAGLAWNWLGGYVGQIS 71

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                 +  G +  V LG  +GL  WL   V  M+ G   ++ G P+L+ RG Y +IAT+
Sbjct: 72  FGHAAMFGTGGFVAVRLGITFGLPFWLTWLVGGMVGGLYALLWGHPTLRLRGPYFSIATI 131

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            + E  + I   W   T G +G+                      P      +  +Y+  
Sbjct: 132 GVGEATRLIATYWTSFTGGSSGLS--------------------LPIGSGPTKYQLYWYG 171

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +      +  WLR++ I      I+++ +A   +     F +     +S   IG+ G 
Sbjct: 172 LYLLAGVVVLSYWLRKSRIGLGLLAIKEDVEAAGDVGVNPTFYQDFVLFLSGTVIGVCGG 231

Query: 248 FFAASRDRISP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           F+A+ +  I P DMF F  +I  + I ++GG+ ++   A    + + + E         +
Sbjct: 232 FYASYQSFIDPLDMFSFDRSISFVLIGVIGGIGTILGPALGAIVFVVIQEFLLASYPQLY 291

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMR 335
             L        +    L +  L + I  R
Sbjct: 292 LGLYGLLLIIVILFEPLGLSGLIMRIARR 320


>gi|322374646|ref|ZP_08049160.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus sp. C300]
 gi|321280146|gb|EFX57185.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus sp. C300]
          Length = 292

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 104/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + +  +L + +
Sbjct: 8   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMDFFLALII 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S + +   G+++   + +       IA LI +     +L        G            
Sbjct: 68  SMVGTALLGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I   RF    +        +L     L   + L +++T +  A R +  +  
Sbjct: 118 -TRAFPQAIETVRFDLGPISLTNVQLMILAVSVLLMVLLQLIVQKTKMGKAMRAVSVDSD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 177 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 236 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 282

Query: 339 LLR 341
           +L 
Sbjct: 283 ILG 285


>gi|221195806|ref|ZP_03568859.1| putative galactoside ABC transporter, permease protein [Atopobium
           rimae ATCC 49626]
 gi|221184280|gb|EEE16674.1| putative galactoside ABC transporter, permease protein [Atopobium
           rimae ATCC 49626]
          Length = 553

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/308 (10%), Positives = 86/308 (27%), Gaps = 9/308 (2%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M  F L+   Y  IL +   +  +   +      +   + ++  Q    +  A G++ ++
Sbjct: 220 MRSFLLQNGLYIVILLVFIGLCVVTPAVKGTQLLTYNNVLNILQQASPRMFLALGVAGLI 279

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
              G   L+      +G  +  I+  +   +    +           + + +        
Sbjct: 280 LLTG-TDLSIGRMVGMGMTASTIIMHQGINTG--GVFGHIFDFTGLPIPVRIIFALLTCI 336

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
            L      ++  F         I+     + +   + +    V         P++ +   
Sbjct: 337 LLCTVFTSIAGFFTAKFKIHPFISTMANMLIIFGIVTYATKGVSFGAIEASIPTAVIPRV 396

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
                ++L      A +     +T        +  N +A       +    L AF ++  
Sbjct: 397 NGFPTIILWAVAAIALVWFIWNKTTFGKNLYAVGGNPEAAAVSGINVFKVMLGAFVMAGI 456

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGV 294
             G                 +    ++  I+  ++      GG+  +S +     I   +
Sbjct: 457 LYGFGSWLECMRMVGSGSAAYGQGWDMDAIAACVVGGVSFTGGIGKISGVTTGVLIFTAL 516

Query: 295 VELCCGMN 302
                 + 
Sbjct: 517 TYSLTILG 524


>gi|220920379|ref|YP_002495680.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219944985|gb|ACL55377.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 281

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 57/305 (18%), Positives = 116/305 (38%), Gaps = 42/305 (13%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             S+   I +  + A  + +V+   G LSL       +GAY+  +L  ++G    + +  
Sbjct: 12  YQSLIHGIGVNGLLALSIYVVLAV-GQLSLGQAAFMGVGAYTGALLTVKFGTPFAVSMAA 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A +     +++G P+L+  G YLAIAT+ + EI + + + W                  
Sbjct: 71  AAAVPALIALVVGGPTLRLTGVYLAIATIGLGEITRIVFLNWDYAGGA------------ 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                 +   Y  L +  +   ++    R+ +  A   +R+++ 
Sbjct: 119 -----------LGLSGIPERGGVGAIYGTLAVVLVGLILVA---RSRVGRAMEAMREDEA 164

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +   +++A  VSSA  G+AG   A     I P+ + F   + ++S  +LGG+
Sbjct: 165 AAGVMGVNLPRYRMTALVVSSALAGIAGCLSAHVSSFIGPNEYGFETAVTILSYALLGGI 224

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S        AIL  + E+   +  +                  +  + + + +L     
Sbjct: 225 GSPVAPVLGAAILTLLPEVLRPLADF---------------RLMVNGLIIVIAVLFMPRG 269

Query: 339 LLRLR 343
           +L  R
Sbjct: 270 ILPWR 274


>gi|146341680|ref|YP_001206728.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146194486|emb|CAL78511.1| putative ABC transporter, permease protein [Bradyrhizobium sp.
           ORS278]
          Length = 336

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 52/352 (14%), Positives = 106/352 (30%), Gaps = 25/352 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQ---------KYIDSMGIQILIYVM 51
           MS F  R   +  ++ +       L+                     + +      +Y +
Sbjct: 1   MSRFIERHPIWSLVILIAIACLAWLIIAVWPPGLEDAIGRKKVFLSAVFNGITLGGLYFL 60

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A G +++ G +  ++L     Y  G Y    + +  G  I   I    +++    ++  
Sbjct: 61  VASGFTLIFGLMRNVNLAHGSLYLFGGYVGYGISAATGSWILAFIAAFVVVAVIGVLLQL 120

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           L   +  G  L    + +        +           I     L               
Sbjct: 121 LVFRRMEGQDLRQTMVTIGLSIVFADLMLWAFGGDFYQIQTPAWLIGPVQLPLMTAMKSS 180

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
             + F+ Y +    +  G   +   + L L RT +    R   D+++   +    I    
Sbjct: 181 GEAVFLQYPLVRLVIFCGSVVIGILMWLALNRTRVGMIVRAGVDDREILAATGVQIQLVF 240

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           +  FA  +   G+AG      +     +  +F      + +VI+GGM S+   A    I+
Sbjct: 241 VLVFAFGAGLAGIAGVVGGTFQSISPGEDTRFLL--ASLVVVIVGGMGSIPGAALGALII 298

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
               +L                         +  + + LV+ +R   LL  R
Sbjct: 299 GLAEQLGSVY--------------IPTYAIVVTFLIMVLVLALRPQGLLARR 336


>gi|75676394|ref|YP_318815.1| branched chain amino acid ABC transporter permease [Nitrobacter
           winogradskyi Nb-255]
 gi|74421264|gb|ABA05463.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Nitrobacter winogradskyi Nb-255]
          Length = 304

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 99/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91
           + +  +   IY + A G ++V G +G+++      + IG +  +I               
Sbjct: 8   LINGVVLGSIYGLIATGYTMVYGIVGMINFAHGDIFMIGGFIALITFLILMSMGLSAVPL 67

Query: 92  -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + +++ VS  ++   G ++   + +       +A L+ +     +L+ +  ++ G    
Sbjct: 68  ILLVMLIVSMAVTAVYGWVVERIAYRPLRQSFRLAPLLSAIGMSFVLMNFSQVSQGAQVK 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +   +    T   S     +  +  ++       +L       A     + RT      
Sbjct: 128 PIPPLITGGYTLHDSGNFAVQLSNVQIVVVTTTIVLL-------AIFSYIVSRTRFGRDM 180

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    +Q     L   +       F + ++   +AG  +      +   M  F   I   
Sbjct: 181 RACEQDQTMAALLGVNVDRTISMTFVIGASLAAVAGMMYLLYYGLVDFFM-GFVAGIKAF 239

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ SL         +  +           +  +  F               L +
Sbjct: 240 TAAVLGGIGSLPGAMLGGLAIGLIETFWSAYFSIEYKDVAAFS-------------ILII 286

Query: 331 VILMRSHSLLRL 342
           V++     LL  
Sbjct: 287 VLIFMPTGLLGR 298


>gi|327310794|ref|YP_004337691.1| inner-membrane translocator [Thermoproteus uzoniensis 768-20]
 gi|326947273|gb|AEA12379.1| inner-membrane translocator [Thermoproteus uzoniensis 768-20]
          Length = 388

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 50/337 (14%), Positives = 101/337 (29%), Gaps = 35/337 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IP 97
           + ++ I I IY ++   L++ VG LGL     V+   IGA +   + ++  L I+   + 
Sbjct: 36  LQNLSIYIGIYAIYVISLNLEVGYLGLPQFGKVMFLIIGAIAVGGIAAKLILLIYQSYLL 95

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            +  ++    +       ++    L    L  +                     +     
Sbjct: 96  KAIGVAPLSNVGNYCMLYQYSVGSLVNQQLAQNPALGFGYFLLGIALAMALSAALGVLFA 155

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYY-------------------------------V 186
           +    +R          S     +  YY                               +
Sbjct: 156 YPAIRLREDYLGILLLVSGEFLRVVTYYATPVACGVNGAVIPDPFAWASGETRTLVFFAI 215

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
              M  ++  +   +  +      R IRD + A       I+  ++   A +SAF G+AG
Sbjct: 216 TAVMLVVTYLVFDTIGNSPFGRTLRAIRDAETAAAVFGKDIVKFRIRVLAFASAFAGLAG 275

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A  A   D      F      I  +++ILGG  +         I   +  +         
Sbjct: 276 ALLAYYFDYTILGTFLPIYTFIGWTMLILGGQGNNVGAIVGAVIYYAIQTVLDIYKNALQ 335

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                           +  +A+ LV++ R   ++  +
Sbjct: 336 A---VLHADPTYLAYAIFGLAIILVLMYRPQGIVPEK 369


>gi|315426798|dbj|BAJ48421.1| branched-chain amino acid ABC transporter permease [Candidatus
           Caldiarchaeum subterraneum]
 gi|315426811|dbj|BAJ48433.1| branched-chain amino acid ABC transporter permease [Candidatus
           Caldiarchaeum subterraneum]
          Length = 311

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 65/327 (19%), Positives = 125/327 (38%), Gaps = 34/327 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  L +        + ++I  +     I+ M A   +++ G +GLLSL     +
Sbjct: 7   VFIAVLLIVLAILAAAPIAFNLRFIIFILTLTNIFAMLAVSWNLLSGYMGLLSLGHSFFF 66

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A G Y+  IL   YG+     + + A++  A G ++GLPSLK RG + A+ TLI+  I  
Sbjct: 67  AGGGYAAAILSISYGVPPVAAVFLGALVITALGSLIGLPSLKLRGHFFALVTLIIPVIAY 126

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +     P   G  GI+    L+                          Y   L     S
Sbjct: 127 QV-TNAIPQLGGHDGIFGIPSLFQSAEAF--------------------YLASLAALAGS 165

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   + R+ +   +  I+D++ A  +    +   KL   A+S    G+AGAF+A    
Sbjct: 166 VLVSYLVMRSRLGLIFTCIKDDEIAAKAAGIDVPRYKLLGLAISIFIAGVAGAFYAYLNG 225

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ISP  ++  +  + + + +LGG  ++        I+  ++E                  
Sbjct: 226 VISPATYELEKASLPLLMTLLGGRATILGPVVGAFIIETLIETLK-------------IE 272

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +      L+ ++    ++ 
Sbjct: 273 VLVRARLLIYSALALLIFMVFPSGIVG 299


>gi|226307972|ref|YP_002767932.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226187089|dbj|BAH35193.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 298

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 88/306 (28%), Gaps = 19/306 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      IY + A  L +V  + G ++           +      +     IW  I  
Sbjct: 8   LISGLTNGSIYAILALALVVVFRATGTINFAQGELALFTTFV-AWWLTTMSWPIWSAIGA 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +    G +M    ++       +A LI++      L     +  G     +      
Sbjct: 67  ALALGFLLGALMERLLIRPVQRRSDMAVLIVALGLFTGLNSLAGMLWGSDTKIMPSPFPN 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T                        VL+ +  L   + L  R+T +    R + DN +
Sbjct: 127 GPTDY--------ISVGGARVYGDALGVLVALVVLLVLMSLLFRKTRVGLHMRAVADNAE 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           +               + V++A   +AG        +       F   I   +  + GG+
Sbjct: 179 SATLAGVPTSRILAIGWGVAAAIGALAGVLVTPLSPQQLGLTTMFPIFIAASAAALFGGL 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL         +  +  +  G       SL +              + + +++ +R + 
Sbjct: 239 DSLVGAVVGGLTIGVLESMLSGYISVIGGSLQQTSAL----------LIIVVILFVRPNG 288

Query: 339 LLRLRT 344
           L   + 
Sbjct: 289 LFGTKK 294


>gi|209546202|ref|YP_002278092.1| branched-chain ABC transporter permease [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|209539059|gb|ACI58992.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 329

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 65/336 (19%), Positives = 128/336 (38%), Gaps = 29/336 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L      L + L L       +     +++L + +FA   ++++G  GLLS      + 
Sbjct: 16  ALSVQAGFLAIGLLLLLLAPFFFYPIFLMKLLCFALFACAFNLLLGYTGLLSFGHATFFG 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             AY        +GL   L I +    +   G++MG  +++ +G Y A+ TL +S++F  
Sbjct: 76  GAAYFTAYTVKTWGLPPELGILIGVAGAAFLGLVMGFFAIRRQGIYFAMITLALSQMFFF 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             ++ K                     ++S+ R   F    +     MYY +LG+  +  
Sbjct: 136 FCLQAKFTEG--------------EDGIQSVPRGHLFGFIDLNSSTNMYYFVLGVFIIGV 181

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            II     +      ++IR+N+    SL  ++   KL AF +S+A  G+AGA  +     
Sbjct: 182 LIIWRFINSPFGMILKSIRENENRAISLGYSVARYKLGAFVMSAALAGLAGAVKSIVFQF 241

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            +     +  +  VI + +LGG+ +L        +++ +        F            
Sbjct: 242 ATLTDVAWQMSGEVILMTLLGGIGTLIGPLFGAGLVVALENYLATSEFPV---------- 291

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                T +  I   + +L+    ++     S    +
Sbjct: 292 -----TIITGIVFMVCVLIFRRGIIGEFYASRLGRK 322


>gi|187922167|ref|YP_001893809.1| branched-chain amino acid ABC transporter inner membrane protein
           [Burkholderia phytofirmans PsJN]
 gi|187713361|gb|ACD14585.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
          Length = 291

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 92/290 (31%), Gaps = 16/290 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-LGSRYGLSIWLLIP 97
           I ++   + I ++ A GL+IV G + +++L       IGAY+  +        + WL + 
Sbjct: 4   ILNILGYVSILILVALGLAIVFGMMDIVNLAHAEWVTIGAYALAVAQAVGGQQAFWLALF 63

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            +  +    G  +    ++   D      L+ +     IL K   +  G   + V     
Sbjct: 64  AAPAVGAFLGWCLERFIIRLLYDRPLDT-LLATYAISLILQKVLELIFGTQPMLVYAPFS 122

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                          P     Y  +  +V+     ++A   L   RT      R +  + 
Sbjct: 123 ------------GAVPVPGGSYPAYRIFVIGVALTVTAGCWLLFARTRFGTQLRAVIQHP 170

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +           AF   +A   +AG   A      S      S       +++LGG
Sbjct: 171 AMAEAAGIDTRRLNRIAFCGGAALASLAGVLVAPMVSVESH--LGVSYLAKAFFVIVLGG 228

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           + S++     +A++     L          S +    S  +       + 
Sbjct: 229 IGSIAGSILGSAVIGTAETLLSYRIDPSLASAVVLVLSIVVIRFRPQGLI 278


>gi|325290336|ref|YP_004266517.1| urea ABC transporter membrane protein [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324965737|gb|ADY56516.1| urea ABC transporter membrane protein [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 302

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 92/301 (30%), Gaps = 16/301 (5%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            I+++ A GL I  G + ++++       +GAY   +L + +   +   +     I    
Sbjct: 16  SIFILAALGLGITFGLMKVINMAHGEFIMVGAYVTYLLQNLFITHLDKHVFGWYFILAIP 75

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
              +    +    +   I  L       +IL  W      +           +       
Sbjct: 76  AAFIVAGLMGLILEAAVIRHL-YGRPLDSILATWGVSLVLQQLARSIFGAPNVDVRSPGW 134

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
           +      +  + +     +++L +      + L L ++      R +  N+    SL   
Sbjct: 135 LDGGLVVNQALQFPYKRLFIILLVMTCLVGVFLLLYKSTTGRRIRAVMQNRDMAASLGIN 194

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
                   FA+ S   G+AG   A      S      +  +    +V+LGG+ +L  I  
Sbjct: 195 TRKIDAYTFAIGSGLAGIAGCALALLGSVGS--TLGSAYIVDTFMVVVLGGVGTLWGIVA 252

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
              ++                               L+ + + L +  +   LL + + S
Sbjct: 253 GGLVIGISNTTFEFFTNTSMGKA-------------LVFMLVILFLQWKPKGLLSISSRS 299

Query: 347 N 347
            
Sbjct: 300 L 300


>gi|84683422|ref|ZP_01011325.1| branched-chain amino acid ABC transporter, permease protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84668165|gb|EAQ14632.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 352

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 126/341 (36%), Gaps = 11/341 (3%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
           KI   +  +    L LF            +  +I ++++      +++G  G++S    +
Sbjct: 4   KITVKIIALSIWGLLLFSPFLFQDVRQIEVAARIAVFIVLVASYDLLIGYTGIVSFAHTM 63

Query: 73  AYAIGAYSYVILGSR---YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
            +  GAY   I   +         + +    ++S    +++GL SL+ +  + A+ TL  
Sbjct: 64  FFGFGAYGVAIAMKQGDSTWGYWMVGVLAGVLVSAIVAVLIGLLSLRVKAIFFAMITLAA 123

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTT---VRSLIRFFRFPSSFVIYEIFMYYV 186
           + +   +  +    T G+ GI  + +  F   T        +  R     +  +I  YY 
Sbjct: 124 ASVALVLASQLSSFTGGEDGITYSVQSIFKPATKLLTDDEGKVLRIMDVRMNGKIAAYYF 183

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +   C +    +L +  + +    + IR+N+     +   ++  + + F +++    +AG
Sbjct: 184 VFISCAVLFWAMLRIVASPLGTVLQAIRENEARAEGIGYRVVAYRTAVFVIAATAAALAG 243

Query: 247 AFFAASRDRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF-- 303
           A +A       PD    F+  I ++ +V++GGM ++        +++        +    
Sbjct: 244 AVYATWLKYTGPDTTLSFAIMIDILLMVVIGGMGTMWGAVIGATLMVMAQYYLRDLMEVA 303

Query: 304 --YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   L  D     R    + I   L++      +   
Sbjct: 304 ANATEALPLLPDLLSPDRWLLWLGIIFILLVYFFPAGIAGT 344


>gi|296272595|ref|YP_003655226.1| urea ABC transporter permease UrtC [Arcobacter nitrofigilis DSM
           7299]
 gi|296096769|gb|ADG92719.1| urea ABC transporter, permease protein UrtC [Arcobacter
           nitrofigilis DSM 7299]
          Length = 370

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 99/334 (29%), Gaps = 19/334 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  V +  L      A     +  ++  + L + + A  L +V G LG+LSL     +
Sbjct: 26  VVVFVVSFCNLFVPSSSAFYISTFTVTILGKYLAFALLALALDLVWGYLGVLSLGHGAFF 85

Query: 75  AIGAYSYVILGSRYGLS---------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           A+G Y   +   R                ++ ++             P   F    L  A
Sbjct: 86  ALGGYGLAMYLMRQIGDRGVYGNPDLPDFMVFMNLKELPWFWYGFDNPLFTFIMIMLVPA 145

Query: 126 TLIMSEIFQNILIKWKPITNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
            L     +     +   +                 +  D  +     +        F   
Sbjct: 146 ILAFVFGWFAFKSRVTGVYLSIITQAMTYALMLAFFRNDMGFGGNNGLTDFKDILGFDLQ 205

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                + +  +      L   I  ++  + +     +IRD +     +   +   K+  F
Sbjct: 206 ADSTRVGLLIITFLALTLGYLICRFIINSRLGRVIISIRDEESRVRFIGYKVEQYKVFIF 265

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+   G+AGA +      I+P +F    +I ++  V +GG  +L        ++    
Sbjct: 266 VVSAILAGIAGALYVPQVGIINPGVFSPLFSIELVIWVAIGGRGTLYGAIIGAIVVNFAS 325

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
                     +   L         +    V+ L 
Sbjct: 326 TYFTSALPEVWLYALGGLFVLVTLYLPKGVVGLI 359


>gi|89899105|ref|YP_521576.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89343842|gb|ABD68045.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 325

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 99/270 (36%), Gaps = 12/270 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           +  +I I  +FA  L +++G  G++SL     + +GAYS  +          + + V   
Sbjct: 38  IINEIAIVALFALSLDLILGFTGIVSLGHAAFFGMGAYSAALFAKLVMPDPLVGLAVGIA 97

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G +     L+       + TL ++ I   +  K   +T G  G+        LG 
Sbjct: 98  CAALLGALCSATILRGTDLTRLMVTLGVALILGELANKLDWLTGGADGLQGVMMGPLLGQ 157

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                         F +      +  L +  +   I      +      + IRDN+    
Sbjct: 158 ------------FEFDLTGRTAAWYSLTVLLVVFVITRRFVNSPFGATLKAIRDNRLRAM 205

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           ++   +       + V++A  G AGA  A +    S D+F+F  +  V+ I+++GG+  L
Sbjct: 206 AIGIAVNSRMALVYTVAAALAGAAGALLAQTTGFASLDLFEFHRSADVMLILVIGGVGWL 265

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                   +   + +    +   Y+   + 
Sbjct: 266 YGGITGAIVFKLMQDAISSITPQYWTFWIG 295


>gi|319784917|ref|YP_004144393.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170805|gb|ADV14343.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 328

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 56/328 (17%), Positives = 109/328 (33%), Gaps = 28/328 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +    +    +       Y  ++    LI+ +FA  L    G  G+L       + IG
Sbjct: 9   LLIFAACVALAIIYPFFVGGYQLTVIRDALIFGLFAASLDFFWGRTGILCFGHAAFFGIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGAC----GMIMGLPSLKFRGDYLAIATLIMSEIF 133
            Y   ++     +S   L+ +   ++GA      +   L     RG Y  I  L M  I 
Sbjct: 69  GYIMALITLNDAISFASLLGIIGAVAGAALVSAIIGYFLFFGGIRGSYFTIVMLAMGVIC 128

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           Q   + W  +T G +G+     + F                  +  ++  Y  +  +  +
Sbjct: 129 QQAAVSWSSVTGGDSGLIGIPPIAFDV----------GGLHVDLSQDLPSYIFVSAIVAV 178

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +   +  + R         I+DN+    +L        L  F +S+A  G+AGA +    
Sbjct: 179 TVLALWSISRGRWGTVLTAIQDNEVRAAALGHNAPLRLLVTFVLSAAIAGLAGALYVCMA 238

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             ++PD+     +  VI  V +GG  +L         +    +     N   +       
Sbjct: 239 GLVAPDLSGLLLSTEVIVWVAVGGRGTLLGPVLGAIFIQRAQQTISSFNPSLWP------ 292

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    L+     +++ +    +L 
Sbjct: 293 --------LLLGCVFVIIVFVLPDGILS 312


>gi|307128897|ref|YP_003880913.1| leucine/isoleucine/valine ABC transporter membrane protein [Dickeya
           dadantii 3937]
 gi|306526426|gb|ADM96356.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Dickeya dadantii 3937]
          Length = 308

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 88/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDAGWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
              ++    +++                     +   I  I           +    R  
Sbjct: 72  LIGVAFIAAVVISSAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLTQGSRDV 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + +                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLIHGQWVLGESNGFAATLSSMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L  +        F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGISTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L     L        +  ++ F               L  V+L+   
Sbjct: 251 IGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSF-------------ALLIGVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|325674013|ref|ZP_08153703.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Rhodococcus equi ATCC
           33707]
 gi|325555278|gb|EGD24950.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Rhodococcus equi ATCC
           33707]
          Length = 363

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 49/351 (13%), Positives = 104/351 (29%), Gaps = 29/351 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             +      ++   +       +  ++  + L + + A G+ +  G  G+L+L   + + 
Sbjct: 9   VWVGFAVAAVVLFGVAPAMLSDFRLNLLAKFLCFAIVAVGIGLAWGRGGMLTLGQGVFFG 68

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY   +        +        M       +    +          A L++      
Sbjct: 69  LGAYIMAMHLKIADAELRGDSVPDFMQIAGIRELPSYWTPFADPFTTIAAILLVPAFVAF 128

Query: 136 IL---------------IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           +L               I  + +    A + +  +       +     FF F  S    +
Sbjct: 129 LLGLGVFKRRVKGAYFAILSQALAAAFAILLIGQQSIGGSNGLNRFRTFFGFNLSDPANK 188

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             ++++   +  L  +    L  +        +RD ++    L       K+ A+ V++ 
Sbjct: 189 RMLFFIAAAVLLLVVAATRQLMNSRYGELLVAVRDQEERVRFLGYDPANIKVVAYTVAAF 248

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           F G+AGA F      ISP       +I  +  V +GG T+L         +         
Sbjct: 249 FAGIAGALFVPIVGIISPADVGIVPSIAFLIGVAIGGRTTLLGPVLGAIGVAWAQTTLSE 308

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                         +F    T    +   +VI      +  L        R
Sbjct: 309 --------------NFPSAWTYAQGLLFIVVIGFFPAGIAGLAKLFGRRRR 345


>gi|319939594|ref|ZP_08013953.1| branched-chain amino acid ABC transporter [Streptococcus anginosus
           1_2_62CV]
 gi|319811183|gb|EFW07489.1| branched-chain amino acid ABC transporter [Streptococcus anginosus
           1_2_62CV]
          Length = 289

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 107/303 (35%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L +   L+ +L + +
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFMGYFLINSLHLNFFLALIL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + + A G+++   + +   +   IA LI +      L        G            
Sbjct: 65  AMVGTAALGVLVEFLAYRPLRNSTRIAALITAIGVSFFLEYVMVYFVGANTRS------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I   R+    +        +L+    L   + + +++T +  A R +  +  
Sbjct: 118 ----FPQVIETVRYNFGPISLTNIQLMILIISLILMVLLQVIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GMTPGLKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++L+R   
Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILILILLVRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|116253480|ref|YP_769318.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115258128|emb|CAK09229.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 387

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 52/330 (15%), Positives = 97/330 (29%), Gaps = 33/330 (10%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 YI S+  + L Y + A  L +V G  G+LSL     +A+G Y+  +   R   +
Sbjct: 40  PLHVPTYIMSLFGKYLTYALLALALDLVWGFCGILSLGHGAFFALGGYAMGMYLMRQIGT 99

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA--- 148
                               LP   +  ++   A L++  +   +   +           
Sbjct: 100 RGSYGDPVLPDFMVFLNWKDLPWFWYGFNHFWFAALMVLIVPGLLAFVFGWFAFRSRVNG 159

Query: 149 ----------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
                             +  D  +     +        F          ++        
Sbjct: 160 VYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDIIGFNVQADGTRAVLFAATAIFLA 219

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           LS  I   + R+        +RD +     L   +   KL  F VS+   G+AGA +   
Sbjct: 220 LSLLIASAIVRSKFGKVLVGVRDAESRTRFLGYRVEHFKLFTFVVSAMMAGIAGALYVPQ 279

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              I+P  F  + +I V+    +GG  +L        ++ G   +  G+           
Sbjct: 280 VGIINPGEFAPANSIEVVIWTAVGGRATLIGPIIGAILVNGGKTIFTGL----------- 328

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              F       +      V L+    ++  
Sbjct: 329 ---FPEFWLFALGGLFVAVTLLLPKGVVGT 355


>gi|89067741|ref|ZP_01155195.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
 gi|89046711|gb|EAR52766.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
          Length = 391

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/361 (11%), Positives = 95/361 (26%), Gaps = 35/361 (9%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           +L    G             + L   + A  + ++ G  G+LSL     + +G Y   + 
Sbjct: 28  VLSEGFGVGVISTSFVKTLGKTLCLCLVAVAMDLIWGYAGILSLGHFAFFGLGGYMIGMW 87

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK---------------------------- 116
                    +   ++          +                                  
Sbjct: 88  LMFERTRHIVEGALADAALPPTPEEIEAAIGNQVFGVVGSSDLPLIWSFADSLAIQLALV 147

Query: 117 ------FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                     +  +A           ++           ++           +  L    
Sbjct: 148 VLVPGLLALVFGWLAFRARVTGVYLSILTQAMTLGLALYLFQNASGLRGNNGLSGLQNLP 207

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
              +      ++ ++       L   +  WL      +  R IRDN+     L  ++   
Sbjct: 208 GVTAPQSEVSLWFFWASALALALGYLLSAWLVSGKFGSVIRGIRDNEARVRFLGYSVEHY 267

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           KL+ F +++   G+AGA +      I+P       +I +   V +GG   L      TA 
Sbjct: 268 KLAIFTLTACIAGIAGALYYPQAGIINPAEIAPIASIYLAVWVAIGGRGRLYGAVIGTAF 327

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           +  +     G       ++  +  ++      L+ ++   V L     +           
Sbjct: 328 VSLLSSWFTGGQAPDL-TVAGYRVAWVDWWLVLLGLSFVAVTLYAPRGIAGGLERLAGRR 386

Query: 351 R 351
           +
Sbjct: 387 K 387


>gi|196234610|ref|ZP_03133429.1| inner-membrane translocator [Chthoniobacter flavus Ellin428]
 gi|196221314|gb|EDY15865.1| inner-membrane translocator [Chthoniobacter flavus Ellin428]
          Length = 303

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 84/265 (31%), Gaps = 2/265 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L  ++        +GA++   L              
Sbjct: 8   LINGLALGAIYALIALGYTMVYGVLRFINFAHADVLMLGAFAAYYLAPSVAKVFGPSTVP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+       ++         ++LA   L        ++         +           
Sbjct: 68  TALTVMVLSAVICAVIGML-IEFLAYRPLRHRPRLTVLITAIGVSLFIEYTGQHEKVFGA 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+         +        V+     L A++   ++RT +  A R +  N++
Sbjct: 127 ATKAFPTLLPQKEIIVGALRCSSNDLVVVGFTAVLLAAMWYIVQRTKVGMAMRAVSFNEQ 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA   + G FFA     I P M      +      +LGG+
Sbjct: 187 AASLMGVNVNAIISFTFAIGSALAAIGGIFFAMRAPGIEPLM-GVQPGLRAFIAAVLGGI 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNF 303
            +L   A    +L  +     GM  
Sbjct: 246 GNLPGAALGGVVLGLIETFFGGMPG 270


>gi|209550648|ref|YP_002282565.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209536404|gb|ACI56339.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 300

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 95/304 (31%), Gaps = 17/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G +G+++      + +G ++ +I+          L   
Sbjct: 8   LFNGLTLGSIYGLVAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLVLTSIFAGLPVA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +++     ++      +  + +A   L  S     ++            I V      
Sbjct: 68  VLLLAMLVVAMLMTSLWNWTIERIAYRPLRGSFRLAPLITAIGMSIVLSNFIQVTQGPRN 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +    +    +   +    ++L    L A     + RTA+  A R    ++K
Sbjct: 128 KPI---PPMISSVYQFGNISVSLKQIVIILITVVLLAVFWYIVNRTALGRAQRATEQDRK 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       F + +A   +AG  +       S     F+  +   +  +LGG+
Sbjct: 185 MAALLGVNVDQTISITFVMGAALAAVAGTMYLMYYGVASF-ADGFTPGVKAFTAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        ++  +  L        +  +  F               L  V++ +   
Sbjct: 244 GSLPGAVLGGLMIGLIESLWSAYFTIAYKDVATF-------------AILAFVLIFKPTG 290

Query: 339 LLRL 342
           +L  
Sbjct: 291 ILGR 294


>gi|254462421|ref|ZP_05075837.1| urea ABC transporter, permease protein UrtC [Rhodobacterales
           bacterium HTCC2083]
 gi|206679010|gb|EDZ43497.1| urea ABC transporter, permease protein UrtC [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 409

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 49/352 (13%), Positives = 102/352 (28%), Gaps = 35/352 (9%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           +L    G             + L   + A  + +V G  G+LSL     + IG Y   + 
Sbjct: 28  VLSEGFGVGVISTSFVKTLGKTLCLCLVAVAMDLVWGFTGILSLGHFAFFGIGGYMIGMW 87

Query: 85  GSRYGLSIWLL-----------------IPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                  + ++                    + +          L        +L +  +
Sbjct: 88  LMYERTRLIVVNSLSQAEIPPTPTEVVDAIGNQIFGVVGSNEFPLIWGFADSLFLQLILM 147

Query: 128 IMSEIFQNILIKWKPITNGKAGIY-----------------VADRLYFLGTTVRSLIRFF 170
           ++      ++  W    +  AG+Y                   D        +  L    
Sbjct: 148 LLVPSLLALVFGWLAFRSRVAGVYLSILTQAMTLALALYLFQNDSGLRGNNGLSGLQNLP 207

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
              +   +  ++ ++       L   +  WL      +  R IRDN+     L  ++   
Sbjct: 208 NVSAPQSVVSLWFFWGSAFALGLGYLLAAWLVNGKFGSVIRGIRDNEARVRFLGYSVEIY 267

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           KL  F +++   G+AGA +      I+P       +I +   V +GG   L       A+
Sbjct: 268 KLVIFTLTAMIAGIAGALYYPQAGIINPAEIAPIASIYLAVWVAIGGRGRLYGAVIGAAL 327

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +  +     G           +   +      L+ ++   V +     +  L
Sbjct: 328 VSLLSSWFTGGQAPDIPLGF-YTIKWVDWWLVLLGLSFVGVTIFTPKGMGGL 378


>gi|189424921|ref|YP_001952098.1| inner-membrane translocator [Geobacter lovleyi SZ]
 gi|189421180|gb|ACD95578.1| inner-membrane translocator [Geobacter lovleyi SZ]
          Length = 294

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 100/305 (32%), Gaps = 26/305 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ S      IY +   G SI+  + G+++        +G    + L     L +W  I
Sbjct: 9   QYLLSGLSTGAIYALIGIGFSIIYNATGIINFAQGEFVMLGGMLTLFLMETLKLPLWAAI 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++ +++   G++    +++       I+ +I++     ++     +   K    +    
Sbjct: 69  PLAVLLATLVGLVFERLAIRPLRKASPISLVIITIGGSILIRGLSMLIWDKDTHALPPFS 128

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +       +            +++L     L      +   T    A R    N
Sbjct: 129 GDEPIMIAGATVLPQH-----------FWILGITVVLIGLNKWFFSHTISGKAMRACSYN 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   +   +    L +F +S+A   +AG   A      +         +      I+G
Sbjct: 178 PRAAGLVGIDVRRMVLLSFVISAAMGSLAGIIVAPLTM--TSYDVGVMLGLKGFCAAIIG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM+S         IL  +  L  G+    +   + F             + L L++ +R 
Sbjct: 236 GMSSGIPTVIGGLILGVLESLGAGLISSGYKDAIAF-------------VILLLILFIRP 282

Query: 337 HSLLR 341
             L  
Sbjct: 283 QGLFG 287


>gi|39937460|ref|NP_949736.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009]
 gi|39651319|emb|CAE29841.1| possible branched-chain amino acid ABC transport system permease
           [Rhodopseudomonas palustris CGA009]
          Length = 341

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 52/337 (15%), Positives = 109/337 (32%), Gaps = 17/337 (5%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSM-GIQILIYVMFAWGLSIVVGSL 63
            L   K D +  LL  +  LL+   +G+  S   +        ++  + A GL++V G +
Sbjct: 14  PLPQAKRDLLPVLLPAILALLMLPLVGSFSSWVTLTVASLAMGMMIFIMASGLTLVFGLM 73

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            +L+       A+GAY   ++      +S    +  +  +     +     S        
Sbjct: 74  DVLNFGHGAFIAVGAYVATLVLLPLAAMSGADSLLTNLAVLVPAVLAAMAVSGALGVVVE 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
            +  L +       ++              A     +            F    +    +
Sbjct: 134 RVLILPVYGQHLKQILMTTGGLIVAEQALYALWGPQIIPLPLPTSLRGSFIIGDIAIAKY 193

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
              V+L    +   I L L RT I    R   +N++   +L   +    L  F V SA  
Sbjct: 194 RLLVMLVGLVVFVGIQLTLNRTKIGLLIRAGVENREMVEALGYHVKRLFLGVFMVGSALA 253

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+ G  +A  R+++          +++  +VI+GG+ S+        ++  V      + 
Sbjct: 254 GLGGVMWALYREQV-HASMGNELTVLIFIVVIIGGLGSVGGCFIGALLVAMVANYGGFL- 311

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
                                 ++ +  +++ R   L
Sbjct: 312 -------------VPKLALVSNILLMVAILMWRPRGL 335


>gi|320450223|ref|YP_004202319.1| membrane spanning protein [Thermus scotoductus SA-01]
 gi|320150392|gb|ADW21770.1| membrane spanning protein [Thermus scotoductus SA-01]
          Length = 317

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 60/327 (18%), Positives = 122/327 (37%), Gaps = 37/327 (11%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L+ LF+     Q Y   +  +  I  + A  LS ++G  G+ SL       IGAY+  + 
Sbjct: 25  LVGLFVLPLFFQGYTLYLATEAAILGLAAVALSFLLGHGGIPSLGQAAFLGIGAYTLGL- 83

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
             + GL + + + ++ +++G    + GL   +  G ++ + TL   ++  ++  KW  +T
Sbjct: 84  SLKAGLPLVVGVILAPLVAGLYAFVTGLLLFRTHGIFILMLTLAFGQMVYSVAHKWAGVT 143

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G  G+ +                      + ++    M+   + + F   + + +L  T
Sbjct: 144 GGDDGLSLP---------------------ADILSPALMHLASVVLLFSMVAFLRFLLAT 182

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                   IR N++   SL       KL A+ +++   G+AGA  A  R  +SP    + 
Sbjct: 183 PFGKTLEAIRQNEEKVRSLGVPTFHFKLGAYVLAAFLTGLAGAGLALHRTFVSPHDLFWI 242

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
            +  ++ +V+LGG   L   A    +   +       +  +                  +
Sbjct: 243 TSATLMVMVLLGGSRGLFGAAFGALLYTLIQAWVSSFSELWG---------------LFV 287

Query: 325 VIALFLVILMRSHSLLRLRTPSNFLER 351
            + L   +L     +  L        R
Sbjct: 288 GLLLIGTVLFAREGIWPLLERKLGGNR 314


>gi|293365060|ref|ZP_06611777.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus oralis ATCC
           35037]
 gi|307702230|ref|ZP_07639190.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Streptococcus oralis ATCC 35037]
 gi|315612829|ref|ZP_07887740.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           ATCC 49296]
 gi|291316510|gb|EFE56946.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus oralis ATCC
           35037]
 gi|307624243|gb|EFO03220.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Streptococcus oralis ATCC 35037]
 gi|315314939|gb|EFU62980.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           ATCC 49296]
          Length = 289

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 103/303 (33%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + +  +L + +
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMDFFLALII 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S   +   G+++   + +       IA LI +     +L        G            
Sbjct: 65  SMAGTALLGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I   RF    +        +L     L   + L +++T +  A R +  +  
Sbjct: 115 -TRAFPQAIETVRFDLGPISLTNVQLMILAVSVLLMVLLQLIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|160901988|ref|YP_001567569.1| inner-membrane translocator [Petrotoga mobilis SJ95]
 gi|160359632|gb|ABX31246.1| inner-membrane translocator [Petrotoga mobilis SJ95]
          Length = 307

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 53/288 (18%), Positives = 114/288 (39%), Gaps = 21/288 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++   +  L      +  Y   + + ILIY+  +    +++   G LS      + +GA
Sbjct: 8   LILVIAIGLLIFLPFYTGAYFLHVVMTILIYMTLSLSWDMML-RTGQLSFGVAGFFGVGA 66

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y  ++  + +G++  + I ++        + +G   LK RG Y AI TL ++ +F  I+ 
Sbjct: 67  YISIVSFANFGINPLVSIFLAGGFMALIALALGFVVLKLRGIYFAITTLALTTVFSVIIR 126

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +T G +G  +                       F      +Y+++L +   +  + 
Sbjct: 127 NTPRLTGGASGKVIP-------------------NIIFQGDSSKIYWLILTLALSTILVS 167

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
               RT +  A  +IR ++    S    I    +  F +++A  G+ GA ++     +SP
Sbjct: 168 EIFSRTRVHFAINSIRTDEVVAKSTGINIFKYLIIIFIITAAIQGITGAVYSQQYGFVSP 227

Query: 259 D-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           +  F     ++ +++ ++GG+ S         +L    E    +  Y 
Sbjct: 228 ETTFSLDFLLLPMAMALVGGIYSTWGPIIGAIVLGFASEYLKLIMPYG 275


>gi|209550637|ref|YP_002282554.1| urea ABC transporter permease [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209536393|gb|ACI56328.1| urea ABC transporter, permease protein UrtC [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 387

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/330 (15%), Positives = 97/330 (29%), Gaps = 33/330 (10%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 YI S+  + L Y + A  L +V G  G+LSL     +A+G Y+  +   R   +
Sbjct: 40  PLHVPTYIMSLFGKYLTYALLALALDLVWGFCGILSLGHGAFFALGGYAMGMYLMRQIGT 99

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA--- 148
                               LP   +  ++   A L++  +   +   +           
Sbjct: 100 RGSYGDPILPDFMVFLNWKDLPWFWYGFNHFWFAALMVLVVPGLLAFVFGWFAFRSRVNG 159

Query: 149 ----------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
                             +  D  +     +        F          ++     +  
Sbjct: 160 VYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDIIGFNVQADGTRAALFAATAVLLA 219

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           LS  +   + R+        +RD +     L   +   KL  F VS+   G+AGA +   
Sbjct: 220 LSLLLASAIVRSKFGKVLVGVRDAESRTRFLGYRVEHFKLFTFVVSAMMAGIAGALYVPQ 279

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              I+P  F  + +I V+    +GG  +L        ++ G   +  G+           
Sbjct: 280 VGIINPGEFAPANSIEVVIWTAVGGRATLIGPIIGAILVNGGKTIFTGL----------- 328

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              F       +      V L     ++  
Sbjct: 329 ---FPEFWLFALGGLFVAVTLFLPKGVVGT 355


>gi|163758517|ref|ZP_02165605.1| branched-chain amino acid ABC transporter, permease protein
           [Hoeflea phototrophica DFL-43]
 gi|162284806|gb|EDQ35089.1| branched-chain amino acid ABC transporter, permease protein
           [Hoeflea phototrophica DFL-43]
          Length = 305

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 98/305 (32%), Gaps = 21/305 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   I  + A GLSIV G + ++++     + +GA     + S +G    +    + ++
Sbjct: 15  AVTAAILALTAIGLSIVFGVMRVVNVAHGEFFMLGAVFAWSIASFFGSHPAVGFVAAILL 74

Query: 103 SGACGMIMGLPSLKF---RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF- 158
           +      +   + +    R DY    T++ +     I+ +   +T G     V       
Sbjct: 75  APLIVGALAAGADRLILQRIDYNPERTIVATIGLLYIIQQATLMTFGPDARPVEPPFNSV 134

Query: 159 --LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
             L     +   +  +    +    +  +++     + + I L + RT      R  + +
Sbjct: 135 IALPWLEHTEAGWQVYWPWGLSVTSYKLFIIFAAVAVLSGIWLLMTRTRFGLIMRATQQD 194

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +    +       F + +    +        +              +   +VI+G
Sbjct: 195 REMAQAFGVPVDRVFAYVFGLGAGLAAVGAVLVVPVQQAHYLMGHDPLL--LSFVVVIIG 252

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ SL     A  ++     +                         +  +A+ +V++ R 
Sbjct: 253 GLGSLPGTVIAAVLIGLTDGIISVFFSPTLAK-------------IIATLAVGMVLVFRP 299

Query: 337 HSLLR 341
             L+ 
Sbjct: 300 RGLMG 304


>gi|262370830|ref|ZP_06064154.1| urea ABC transporter, permease UrtC [Acinetobacter johnsonii SH046]
 gi|262314192|gb|EEY95235.1| urea ABC transporter, permease UrtC [Acinetobacter johnsonii SH046]
          Length = 357

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 107/357 (29%), Gaps = 30/357 (8%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLL---LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSI 58
           S+FS +      I    AV+  L    L     A     Y  ++  +I+   + A  L +
Sbjct: 5   SLFSDKPYSALAIAVCFAVMLILPWLHLLPVDSAFHLSAYWVTLIGKIMCLALVALALDL 64

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGM 108
           V G  G+LSL   + +A+G Y++ +                   W  +P   + S     
Sbjct: 65  VWGYAGILSLGHGLYFALGGYAFGMYLMRQTAGDSLPDFMRFLSWTELPWYWVGSNHFLW 124

Query: 109 IMGLPSLKFRGDYLAIATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
            + L  L                  +     +I            +  +  +        
Sbjct: 125 ALALVVLVPGVVAFIFGFFAFRSKIKGVYFSIITQAMTFAAALLFFRNETGFGGNNGFTG 184

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                    +       +  +   +  L    +  L           IRD++     L  
Sbjct: 185 FKTILGMDITSAPMRATLCSLTALVLMLCFVGLRHLMNKPYGRVLGAIRDSENRLQYLGY 244

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
             ++ KLSA+ +S+   G+AGA +      I+P       +I +   V  GG  +L    
Sbjct: 245 RTLWYKLSAWVLSAVIAGIAGALYVPQAGIINPSEMNPVNSIEMAVWVAAGGRGTLIGPI 304

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               ++ GV                 F  ++      ++     +V +     ++ L
Sbjct: 305 LGAGLINGVKTY--------------FTVAYPEAWLLILGALFIVVTIFLPKGVIGL 347


>gi|56751620|ref|YP_172321.1| neutral amino acids ABC transporter permease NatD [Synechococcus
           elongatus PCC 6301]
 gi|81301304|ref|YP_401512.1| integral membrane protein of the ABC-type Nat permease for neutral
           amino acids NatD [Synechococcus elongatus PCC 7942]
 gi|25019681|gb|AAL03939.2|U30252_30 LivH [Synechococcus elongatus PCC 7942]
 gi|56686579|dbj|BAD79801.1| integral membrane protein of the ABC-type Nat permease for neutral
           amino acids NatD [Synechococcus elongatus PCC 6301]
 gi|81170185|gb|ABB58525.1| integral membrane protein of the ABC-type Nat permease for neutral
           amino acids NatD [Synechococcus elongatus PCC 7942]
          Length = 313

 Score = 75.7 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/318 (13%), Positives = 94/318 (29%), Gaps = 27/318 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y +FA G ++V   LG+++      + +GAY    L         LL   
Sbjct: 7   LINGLAIGGVYALFALGYTLVFSILGVINFAHGAVFTLGAYLTYALVGGRFSFNGLLANA 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   S    + + L SL   G  L I  +    + +        + +          L  
Sbjct: 67  ALPFSLPFALALLLGSLLAGGASLLIEQVAFRPLRRRQADPLLTLISSLGVAVFIVNLIQ 126

Query: 159 LGTTVRSLIRFFRFPSS------------FVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
           +                             +        + +    + + +   +  T +
Sbjct: 127 ILVGAEIYTFPSNIYGDLPSAINLGSSDRPIQIRTVQIILFVVAIAMFSLLTWLINGTRV 186

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
            +A + + ++      L           F +S    G+AG     S   I+   F  +  
Sbjct: 187 GHALKAVAEDATTASLLGIDPDRYIRLTFFLSGVLGGLAGTLVGTSV-SITGPYFGIAYG 245

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           +  +S+++LGG+ ++        +L                        ++     +   
Sbjct: 246 LKGLSVMVLGGLGNIPGTIAGGLLLGLAEAWV--------------PPQWSGYRDAVAFA 291

Query: 327 ALFLVILMRSHSLLRLRT 344
            LF ++L+R   L     
Sbjct: 292 LLFAMLLIRPQGLFSRAR 309


>gi|325970447|ref|YP_004246638.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy]
 gi|324025685|gb|ADY12444.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp.
           Buddy]
          Length = 293

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 93/305 (30%), Gaps = 26/305 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +       Y + A G ++V G L L++      + +  Y  +   + +     + I ++
Sbjct: 11  LTGISLGGAYALIAIGYTLVYGILRLINFAHGDIFMMAGYFMIFSLASFP--WPVAIVIT 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++ A G+++   + K       ++ +I +     +L                +     
Sbjct: 69  LVVTTAMGILIERMAYKPLRSSPRMSIMISAIGVSYLLQNLSTYLFTAIPRGYPEIPILK 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                  +             I +  +L+ +            +T    A R +  + + 
Sbjct: 129 RIFQMGELSASFVTILTPALTIVLVIILMVLV----------NKTKTGMAMRAVSKDFET 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   I       FA+ S   G+    +   R  ++P        +      + GG+ 
Sbjct: 179 AKLMGININRVISVTFAIGSFLAGVGSILYFTDRMSVTPFS-GTLPGLKCFVAAVFGGIG 237

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           ++         +  V  L   + +  F+    F               L +++L+R   L
Sbjct: 238 NIPGAVVGGFFIGIVETLLVALGYSTFSDAFTF-------------FLLIVMLLVRPTGL 284

Query: 340 LRLRT 344
              +T
Sbjct: 285 FGEKT 289


>gi|303327417|ref|ZP_07357858.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Desulfovibrio sp. 3_1_syn3]
 gi|302862357|gb|EFL85290.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Desulfovibrio sp. 3_1_syn3]
          Length = 297

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 86/303 (28%), Gaps = 22/303 (7%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +      +Y + A G ++V G L L++        +GAY        +G    +   +S 
Sbjct: 12  NALTLGSLYALIAIGYTMVYGILRLINFAHGDILMVGAYFVFFGTFAFGWPWGVAAIMSI 71

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
             +   G+I+   + +   D   I+ LI +      +     +                 
Sbjct: 72  AGASLLGVIIERVAYRPLRDAPRISALISAIAVSFFIESLAVVVF----------TGQPR 121

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             ++       +    +       +V      L   ++  + RT    A R I  + +  
Sbjct: 122 PVLQPEWLVSEWQVGGLRILRLTAFVPTMTAVLVGILLYIVYRTKPGLAMRAISKDIETT 181

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             L   +       F + SA    +G  +A    ++ P M      +      + GG+ S
Sbjct: 182 RLLGVRVDNIIAFTFCIGSALAAASGIMWALRYPQVHPYM-GIMPGLKAFIAAVFGGIGS 240

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +         L  V  +              F     +    +           +   LL
Sbjct: 241 IQGAVIGGVALGFVEIMTVAFMPELSGYRDAFAFVLLVLVLLI-----------KPTGLL 289

Query: 341 RLR 343
             R
Sbjct: 290 GER 292


>gi|77457474|ref|YP_346979.1| inner-membrane translocator [Pseudomonas fluorescens Pf0-1]
 gi|77381477|gb|ABA72990.1| L-leucine ABC transporter membrane protein / L-valine ABC
           transporter membrane protein / L-isoleucine ABC
           transporter membrane protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 307

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 89/290 (30%), Gaps = 2/290 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y IG+Y   I  +   +     +P+
Sbjct: 11  LVNGLNVGSMYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIAIAGLTMMGLESVPL 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
              ++    +++                   + +   I  I           +    +  
Sbjct: 71  LMTVAFIASIVVTSSYGYSIERIAYRPLRGSNRLIPLISAIGMSIFLQNTVLLAQDSKDK 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   +     F    +  V+       V +        + L++ R+ +  A R   ++ 
Sbjct: 131 AIPNLIPGNFAFGPGGAHEVLISYMQIVVFVVTLIAMLGLTLFISRSRLGRACRACAEDI 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +A    +     I+P+   F   +   +  +LGG
Sbjct: 191 KMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNA-GFLVGLKAFTAAVLGG 249

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           + S+        +L         +    +  ++ F     +       I 
Sbjct: 250 IGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299


>gi|170734743|ref|YP_001773857.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
 gi|169820781|gb|ACA95362.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
          Length = 295

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 60/308 (19%), Positives = 114/308 (37%), Gaps = 19/308 (6%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             +I  +     +Y   A GL++  G  GL++   +    +GAY+  I  S+ G  +   
Sbjct: 2   SSFIIHLLTVGCLYATMALGLNLQAGYAGLVNFGFIAFSGLGAYAAGI-ASQLGWPLPSA 60

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + ++   +GA  +++     +   DY  IATL ++EI + I +    +T G  GI     
Sbjct: 61  LALALAAAGALAIVVARLGRQLSADYWGIATLAIAEILRTIALNESWLTGGAQGIGGIAP 120

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           L+       +               +    V  G   L+ +    L  +    A + +R+
Sbjct: 121 LFPGLRAPWAD--------------LAFLAVTAGCLALTYATYRRLTASRFGRALKVMRE 166

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
                       +  K  A    +    +AGA  A     + PD    SE   + ++V++
Sbjct: 167 EPALAVCFGYDPLALKTRASIAGALPAALAGALAAWYIGYVGPDAMIASETFALWTVVMV 226

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S   +   T I+    +    +  +  + L             L+ + L   +L R
Sbjct: 227 GGLGSHVGVLVGTLIV----QAVYALAPFLKDWLAVGSDLTGAVRLGLVGLMLLACVLWR 282

Query: 336 SHSLLRLR 343
            H L+  R
Sbjct: 283 PHGLVPER 290


>gi|27378496|ref|NP_770025.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351644|dbj|BAC48650.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA
           110]
          Length = 336

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 90/305 (29%), Gaps = 16/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G +++ G +  ++L     Y  G Y    + +  G  +   I  
Sbjct: 48  VFNGITLGGLYFLVASGFTLIFGLMRNVNLAHGSLYLFGGYVGYAISTATGSWLLSFIVA 107

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    ++  +   +  G  L    + +        +           I     L  
Sbjct: 108 FVLTALVGVLLQVIVFRRMEGQDLRQTMVTIGLSIVFADLMLWACGGDFYQIQTPSWLIG 167

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                            ++ Y +    +      +   + L L RT I    R   D++ 
Sbjct: 168 PVDLPLITAVKSSGEPVYLRYPVVRLVIFAASVVIGVGMWLALNRTRIGMIIRAGVDDRD 227

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    I    +  FA  +   G+AG      +             +  + +VI+GGM
Sbjct: 228 MLAATGVRIQLVFVLVFAFGAGLAGIAGVVGGTFQSL--SPGEDIRFLLASLVVVIVGGM 285

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A    I+    +L                         +  + + LV+ +R   
Sbjct: 286 GSIPGAALGALIIGLAEQLGSVY--------------IPTYAIVVTFLIMVLVLAIRPQG 331

Query: 339 LLRLR 343
           LL  R
Sbjct: 332 LLARR 336


>gi|332286049|ref|YP_004417960.1| putative permease component of branched-chain amino acid transport
           system [Pusillimonas sp. T7-7]
 gi|330430002|gb|AEC21336.1| putative permease component of branched-chain amino acid transport
           system [Pusillimonas sp. T7-7]
          Length = 410

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 57/328 (17%), Positives = 117/328 (35%), Gaps = 34/328 (10%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L ++  L   L          + +  IQ+LI  +FA   +++ G  G+LS      +AIG
Sbjct: 6   LFIIAVLFAMLLALPLYLPTSLVNAAIQMLIAALFASAFNVLAGQGGMLSFGHSAYFAIG 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD----YLAIATLIMSEIF 133
            ++ +   +    +  L  P   ++    G  +G+ +  F       Y ++ TL ++E+ 
Sbjct: 66  TFATIHGMNALDETGLLPTPFMPLLGALAGCGLGIVAGWFSTQRSGVYFSMITLALAELL 125

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +    K I  G+ G+       +      S               I +YY+ L    L
Sbjct: 126 HTLAPHLKDIFGGEGGVSAMRMPAWGFNFGTS---------------IEVYYLTLAWVAL 170

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
             +++    RT +      +R+N      +   +   +   F +S+ F G+AGA  A + 
Sbjct: 171 GIALLYCFTRTPLGRLCLGLRENSHRLKFMGYNVHKLRTMVFTISATFSGLAGALLAMNN 230

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           +  +  +F  + +  V+    +GG+ +    A   A++         M   +        
Sbjct: 231 EAANYVLFDMTLSTQVVLNSYIGGIGAFFGPALGAAVMTFFGYAVSDMTRTW-------- 282

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                       +   LV++     L  
Sbjct: 283 -------LLYQGVIFVLVMMFMPAGLFS 303


>gi|320327043|gb|EFW83057.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330877004|gb|EGH11153.1| high-affinity branched-chain amino acid ABC transporter permease
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 307

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 93/297 (31%), Gaps = 16/297 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91
           + +       Y + A G ++V G +G+++      Y IG+Y   +  +   +        
Sbjct: 11  LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70

Query: 92  -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +      + +++ A G  +   + +   +   +  LI +      L     ++ G    
Sbjct: 71  LMIAGFAAAIVVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNF 130

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            + + L          + F    +  V+       V +        + L++ R+ +  A 
Sbjct: 131 AIPNLL-------PGSLSFGPGGAQEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRAC 183

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F V +A   +A    +     I+     F   +   
Sbjct: 184 RACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVIN-PSAGFLVGLKAF 242

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  +LGG+ S+        +L         +    +  ++ F     +       I 
Sbjct: 243 TAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299


>gi|134291187|ref|YP_001114956.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|134134376|gb|ABO58701.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia vietnamiensis G4]
          Length = 291

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 90/304 (29%), Gaps = 29/304 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-LGSRYGLSIWLLIP 97
           + ++   + I  + A GL+I+ G + +++L       IGAY+  +        + W  + 
Sbjct: 4   VLNILSYVSILTLVALGLAIIFGLMDIVNLAHAEWVTIGAYTLAVAQSLGGAHAFWFALF 63

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            +  +    G  +    ++   +      L    +   +    + +              
Sbjct: 64  AAPAVGAVLGWCLERLVIRLLYERPLDTLLATYAVSLIVQKALELVFG------------ 111

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                +         P     Y  +   V+     ++    L   RT      R +  + 
Sbjct: 112 -THPMLVYAPVDGAIPVPGGSYPAYRLVVIGVALAVTGGCWLLFARTRFGTQLRAVIQHP 170

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               ++          AF   +A   +AG   A      S      +       +++LGG
Sbjct: 171 AMAEAVGIDTRRLNRLAFCGGAALASLAGVLVAPMVSVESH--LGVAYLAKAFFVIVLGG 228

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S++     +A +     L          S              ++++   ++I  R  
Sbjct: 229 IGSIAGSLFGSAFVGTAETLLSYRVDPSLASA-------------IVLVLSIVLIRFRPQ 275

Query: 338 SLLR 341
            LL 
Sbjct: 276 GLLP 279


>gi|256045388|ref|ZP_05448282.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Brucella melitensis bv. 1 str. Rev.1]
 gi|260565719|ref|ZP_05836202.1| high-affinity branched-chain amino acid transport system permease
           LIVH [Brucella melitensis bv. 1 str. 16M]
 gi|265991817|ref|ZP_06104374.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1]
 gi|260151092|gb|EEW86187.1| high-affinity branched-chain amino acid transport system permease
           LIVH [Brucella melitensis bv. 1 str. 16M]
 gi|263002773|gb|EEZ15176.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1]
          Length = 302

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 101/313 (32%), Gaps = 33/313 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89
           + +      IY + A G ++V G +G+++      + +GA+         +  I      
Sbjct: 8   VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 67

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L + L++ V+ +++G     +   + +       +A LI +      L  +  +T G   
Sbjct: 68  LMLLLMMIVAMLLTGLWSWAIERVAYQPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             V   L                  S     +    V++    L       + RT++  A
Sbjct: 128 KPVPQLLNGSYELF----------GSGGTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 177

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +    +AG  + +    IS     F   +  
Sbjct: 178 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 236

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +  L        +  +  F               L 
Sbjct: 237 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 283

Query: 330 LVILMRSHSLLRL 342
           +V++     +L  
Sbjct: 284 IVLIFMPSGILGR 296


>gi|148255807|ref|YP_001240392.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. BTAi1]
 gi|146407980|gb|ABQ36486.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 351

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/337 (13%), Positives = 108/337 (32%), Gaps = 17/337 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K+ ++    A +   ++ + +  +  + +            + A  L+ + G  G+LS
Sbjct: 1   MPKHVRLALQAAGILLAIVAIAVVPSVIELFALMQLTLFAAMAVLALSLAFIWGFGGILS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                 + +G Y+Y I    +  S   ++   A+ +    ++              +   
Sbjct: 61  FGQTAFFGLGGYAYAIAAVNFQDSTPAILLAIAVPALFAAILGYFIFFGR---ISDVYLG 117

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           +++     IL      T+G A       L               F  S V+     ++  
Sbjct: 118 VITLTVTLILFNSVNSTSGDAYKIGKALLGGFNGMPAVPTFNVPFDPSTVLSPEQSWWTT 177

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
            G+      ++  L           +R+N+     L       K   F +  A  G+AGA
Sbjct: 178 AGVLLAVFLMLRLLLALPAGRVIVAVRENEVRASLLGYDPRLVKCLTFILGGAIAGLAGA 237

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +      +SP +F  S +  +I  + +GG+ +L        ++  +V           N
Sbjct: 238 LYVNWGAFVSPTIFSLSLSAEIIIWITVGGLGTLLGPIIGCVVIEYIVAYIGSQQLLNSN 297

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                          ++   L + +L+    ++    
Sbjct: 298 --------------LVLGGVLVIFVLLLPKGIVPTAR 320


>gi|322385048|ref|ZP_08058698.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus cristatus
           ATCC 51100]
 gi|321270958|gb|EFX53868.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus cristatus
           ATCC 51100]
          Length = 293

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 107/303 (35%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y IGA+    L +   L+ ++ + +
Sbjct: 9   LANGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMIGAFMGYYLINTLHLNFFVALIL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S + +   G+++   + +   +   IA LI +     +L        G            
Sbjct: 69  SMVGTAILGVVIEFLAYRPLRNSTRIAALITAIGVSFLLEYGMVFFVGANTRS------- 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I+  R+    +        +L     L   +   +++T +  A R +  +  
Sbjct: 122 ----FPQVIKTVRYTLGPISISNIQLMILGISILLMVGLQFIVQKTKMGKAMRAVSVDSD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  I      +LGG+
Sbjct: 178 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GMTPGIKSFVAAVLGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +      +               +     ++   L +++L+R   
Sbjct: 237 GIIPGAALGGFVIGLLETFATAVG-------------LSDFRDAIVYAILIIILLVRPAG 283

Query: 339 LLR 341
           +L 
Sbjct: 284 ILG 286


>gi|298292397|ref|YP_003694336.1| urea ABC transporter permease UrtC [Starkeya novella DSM 506]
 gi|296928908|gb|ADH89717.1| urea ABC transporter, permease protein UrtC [Starkeya novella DSM
           506]
          Length = 390

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/329 (11%), Positives = 89/329 (27%), Gaps = 36/329 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------- 86
             +      + L Y   A GL +  G  G+LSL   + + +G Y   +            
Sbjct: 37  DNFRLQFVGKYLTYAFVALGLVLCWGYAGILSLGQGVFFGLGGYCMAMFLKLEASSVENT 96

Query: 87  ----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                         +    +P       + G       L      L +   +       +
Sbjct: 97  KIQTTPGIPDFMDWNQITALPWFWEPFRSFGFTTIAVVLVPAFFALLVGYALFKRRVGGV 156

Query: 137 LIKWKPITNGKAGIYVA---DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
                          +             +  L     +       +  +Y+V + +   
Sbjct: 157 YFAIITQALAAIMTILIIGQQGYTGGINGITDLRTLHGWDIRTDSAKTVLYFVCVALLIG 216

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              +  +++ + +      +RD +         +   K+  F ++++   + GA F    
Sbjct: 217 CILLAYYVKSSKLGRILVAMRDKEDRVRFSGYDVSSFKIFVFCLAASLSAIGGAMFTLQV 276

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             +SP       +I ++    +GG  S+      T ++                    F 
Sbjct: 277 GFMSPSFVGIVPSIEMVIYTAVGGRLSILGAIYGTLLVNWAKT--------------SFS 322

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            SF       +      V+L+  + +  L
Sbjct: 323 ESFPELWLFGLGGMFIAVVLIFPNGIAGL 351


>gi|295111647|emb|CBL28397.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           (TC 3.A.1.4.-) [Synergistetes bacterium SGP1]
          Length = 293

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 94/305 (30%), Gaps = 23/305 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +I S      IY + A G ++V G   +L+        +GAY      +RY L     +
Sbjct: 5   SFIISGISLGSIYAIIALGYTMVYGIAKMLNFAHGDVIMVGAYVCFYAVARYQLPAVAGV 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++  +    G+++   + K      ++A LI +      L     +            +
Sbjct: 65  ALAMFVCTILGIVVERLAYKPLRQAPSLAVLITAIGVSYFLQNSALLLWTSNPKIFPSVV 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                               +         ++    +  ++  +  RT +  A R   ++
Sbjct: 125 GKGTLKFFG---------GQLSISYVTIVTVVTCVVIMLALTWFTGRTRMGKAMRACSED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ S    +AGA   ++   +          I   +  + G
Sbjct: 176 KGAAQLMGINVDATISMTFAIGSGLAAVAGALLCSAYPTL-MPTTGSMPGIKAFTAAVFG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        +L  +            +               ++   L +V+L++ 
Sbjct: 235 GIGSIPGALFGGLLLGVIEIFAKAYISTQLSDA-------------VVFAVLIVVLLVKP 281

Query: 337 HSLLR 341
             LL 
Sbjct: 282 AGLLG 286


>gi|225027548|ref|ZP_03716740.1| hypothetical protein EUBHAL_01805 [Eubacterium hallii DSM 3353]
 gi|224955124|gb|EEG36333.1| hypothetical protein EUBHAL_01805 [Eubacterium hallii DSM 3353]
          Length = 549

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/318 (9%), Positives = 83/318 (26%), Gaps = 9/318 (2%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y  I+ +   +  +          +   + ++  Q    +  A G++ ++   G   L+ 
Sbjct: 226 YIAIILIFVALCVITPIKKGTPLLTYNNVLNILQQASPRMFLALGVAGLILLTG-TDLSV 284

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +G  +  I+  +   +    +           +   +         L      ++
Sbjct: 285 GRMVGMGMTAATIIMHQGINTG--TVFGHTFDFTNIPVGGRVVLALVVCIVLCTVFTSIA 342

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             F         I+     + +   + +    V         P+  +        ++L  
Sbjct: 343 GFFTAKFKMHPFISTMANMLVIFGLVTYATKGVSFGSIEATIPNMIIPKVNGFPTIILWA 402

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 +     +T        +  N +A      ++    L AF ++    G       
Sbjct: 403 LAAIIIVWFIWNKTTFGKNLYAVGGNPEAAAVSGISVFAVTLGAFIMAGILYGFGSWLEC 462

Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A         +    ++  I+  ++      GG+  +S +     I   +      +   
Sbjct: 463 ARMVGSGSAAYGQGWDMDAIAACVVGGVSFTGGIGKISGVVTGVCIFTALTYSLTILGID 522

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +       +  T 
Sbjct: 523 TNLQFVFSGIIILVAVTL 540


>gi|91780287|ref|YP_555494.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91692947|gb|ABE36144.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 290

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/307 (15%), Positives = 105/307 (34%), Gaps = 26/307 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ +  +  + Y + A GL+++ G + +++      Y +G      + +R GL  +  +
Sbjct: 6   QFLVNGVVIGVFYALSALGLTLIFGLMRVVNFAHGEFYMLGGILGWFVTTRLGLDFFSGL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            + A++  A G ++    ++        A ++++     ++     +  G A   V   +
Sbjct: 66  AIVAVVMAAFGWVIDRLLIERVRHQGEEAGILLTIGLSIVIANVALLVVGTAPHKVVGPV 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                               V+        L     L A+    + RT +  A R    +
Sbjct: 126 SDAPV-----------LLGPVVLTRVRLVALAIAALLVAAAHGLIHRTTLGRAMRATFQD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             A             S FA+ +    ++G   A+            + ++    +VILG
Sbjct: 175 PMAARLAGIRTERIYASTFALGTTIAALSGMLLASIYSA--QVSIGGTVSLKAFVVVILG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM S +       +L  V  +  G        L+ F             + +  ++L R 
Sbjct: 233 GMGSFAGAIVGGLVLGIVEAMWGGYLSTNLVDLVGF-------------VLVIALLLFRP 279

Query: 337 HSLLRLR 343
           + L  LR
Sbjct: 280 YGLFSLR 286


>gi|303246754|ref|ZP_07333031.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
 gi|302491771|gb|EFL51651.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
          Length = 305

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 90/304 (29%), Gaps = 13/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      +Y + A G ++V G + L++ +    +A G Y  VIL S       +    
Sbjct: 8   FINGLTLGGVYALVALGYTMVYGIIALINFSHGEIFAAGGYMGVILLSYMTSKGLMATHP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++ A  + MG  ++            +      ++L+    ++       +  +  +
Sbjct: 68  WFGLAFALILAMGYCAMLAMAVEKVAYKPLRQSSRLSVLLSALGMSIFLQNGLMLTQGVY 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        F +  V        ++     L   +   + RT I  A R    ++ 
Sbjct: 128 DKAYPTEFTHG-GFEAWGVRVSYMQIGIIGVTALLLFLLNALVFRTRIGKAMRATAQDKV 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + FA+ +A    AG         +      F   I   +  +LGG+
Sbjct: 187 MSALVGINSDRVISTTFAIGAALAAAAGIMVGMYYGSV-RYDMGFVPGIKAFAAAVLGGI 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +++       I+  V  L      +                     + L LV+      
Sbjct: 246 GNITGAMIGGFIIGMVEILAAAYIPHG-----------GEYKDVFAFVILILVLYFMPTG 294

Query: 339 LLRL 342
           ++  
Sbjct: 295 IMGE 298


>gi|282900112|ref|ZP_06308069.1| inner-membrane translocator [Cylindrospermopsis raciborskii CS-505]
 gi|281194994|gb|EFA69934.1| inner-membrane translocator [Cylindrospermopsis raciborskii CS-505]
          Length = 368

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 61/371 (16%), Positives = 120/371 (32%), Gaps = 60/371 (16%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            +Y+  + I    + +FA GL++  G  GL+S   +    +GAY+ VIL  +    ++L 
Sbjct: 2   SEYLIFLAISTATFSLFALGLNLQWGFTGLISFGHIAFMTLGAYTTVILSLKGIP-LFLS 60

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK-----PITNGKAGI 150
               A+++   G+++G  +L+ R DYL I T+   E+ + +             +G  GI
Sbjct: 61  AVAGAIVAALLGLVIGFATLRLREDYLGIVTIGTGELIRLVFNNQDLPVGDRWISGAFGI 120

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY------------------------- 185
                       +   +      +      +F  +                         
Sbjct: 121 QSYVIPLATTPNLLFRLVMIGVLTLLTSVTLFSLWRWVKNTRKNNHRAEFTSHLVVGIIL 180

Query: 186 --------------------------VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                                     ++L +       + +L ++      + IR++++ 
Sbjct: 181 GLLSLAIYIAGVLGLYNYNPKAGLMLLVLLVLAFVFWRLEFLVQSPWGRVLKAIREDEEV 240

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   +   KL +  +  A  G+AGAFFA     I PD F+         +VILGG  
Sbjct: 241 PKALGKNVFSYKLQSLILGGAIAGIAGAFFAWQLSAIYPDNFQPQLTFDAWIMVILGGSG 300

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           +         I      L                          +   L  +++ R   +
Sbjct: 301 NNLGTILGAVIYFAYDALTREFLPKIVPLD---AERIGAFRIMFIGFILMSLMIWRPQGI 357

Query: 340 LRLRTPSNFLE 350
           L  +      +
Sbjct: 358 LGKKEELTLGK 368


>gi|254469872|ref|ZP_05083277.1| inner-membrane translocator [Pseudovibrio sp. JE062]
 gi|211961707|gb|EEA96902.1| inner-membrane translocator [Pseudovibrio sp. JE062]
          Length = 306

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 105/305 (34%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     L   + A GL++V G +GL++L     Y IGA+    +  + G     L   
Sbjct: 10  ILNGLQFGLTLFLMAAGLTLVFGVMGLINLAHGSLYMIGAFCCAWITQQTGSFWLGLGGG 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               + A  +I  L   +              +    +L  +  I     G  +      
Sbjct: 70  VLGAAAAGALIEMLVIRRLYDR----------DHLDQVLATFALILIFSEGTRMVFGSMP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   +   +           Y ++  +++L    ++  + + + +T +    R    +++
Sbjct: 120 LYLNIPEALSGTVALPGVEAYPVYRLFIILAALAVAVLLYMLISKTRLGMRIRAGESDRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +A  G++G    A R             I+   ++++GG+
Sbjct: 180 MIAALGVDIKTLYTIVFALGAAIAGLSGTLVGALRSV--QVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMR 335
            S+      + ++  V  L            ++   + ++       L+ + +  ++ ++
Sbjct: 238 GSIKGALIGSILIGLVDTLGRIFLPVILKFFMENASANSVGAALSSMLIYLMMAGILAVK 297

Query: 336 SHSLL 340
              L 
Sbjct: 298 PKGLF 302


>gi|23502645|ref|NP_698772.1| branched-chain amino acid ABC transporter permease [Brucella suis
           1330]
 gi|254703557|ref|ZP_05165385.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella suis bv. 3 str. 686]
 gi|261754192|ref|ZP_05997901.1| inner-membrane translocator [Brucella suis bv. 3 str. 686]
 gi|23348652|gb|AAN30687.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella suis 1330]
 gi|261743945|gb|EEY31871.1| inner-membrane translocator [Brucella suis bv. 3 str. 686]
          Length = 302

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 103/313 (32%), Gaps = 33/313 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL---------GSRYG 89
           + +      IY + A G ++V G +G+++      + +GA+  +I+              
Sbjct: 8   VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFTGMLPVA 67

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L + L++ V+ +++G     +   + +       +A LI +      L  +  +T G   
Sbjct: 68  LMLLLMMIVAMLLTGLWSWAIERVAYRPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             V   L                  S V   +    V++    L       + RT++  A
Sbjct: 128 KPVPQLLNGSYELF----------GSGVTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 177

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +    +AG  + +    IS     F   +  
Sbjct: 178 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 236

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +  L        +  +  F               L 
Sbjct: 237 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 283

Query: 330 LVILMRSHSLLRL 342
           +V++     +L  
Sbjct: 284 IVLIFMPSGILGR 296


>gi|156741872|ref|YP_001432001.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941]
 gi|156233200|gb|ABU57983.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941]
          Length = 393

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/318 (13%), Positives = 99/318 (31%), Gaps = 19/318 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-----------ILGSR 87
           I    ++  +Y   A G ++V G L  ++      + +GA+              +    
Sbjct: 75  IVDGLVRGFLYATIALGYTMVYGVLEFINFAHGEIFMVGAFVGAFFSAALASSGMLTTLS 134

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL---IKWKPIT 144
             L +   + +   +SG   M +   + +   +   +  LI +     +L   ++   + 
Sbjct: 135 PILFVIAAVLLGMAVSGVLAMSIERVAYRPLRNAPRLVPLISAIGVSLVLQDVMRMIAVN 194

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G                V + +      +  V  +      ++    +   +   +  T
Sbjct: 195 TGLGFNAQFRTPDLGQPLVLAQMPISDERTIPVSIDSRSLIFIVVAILMLIGLNYLVNIT 254

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            +  A R +  ++ A   +   +       F +  A  G AG  F      I+P +  F 
Sbjct: 255 KLGKAIRAVAQDRPAASLMGIDVNRVIAITFLIGGALGGAAGILFGMRVGTINPYV-GFL 313

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
             +   +  +LGG+ +++       +L  +          +         S       + 
Sbjct: 314 PGLKAFTAAVLGGIGNITGAMVGGIVLGFLEAFVASYLSLFTRG----QFSGASYADIVA 369

Query: 325 VIALFLVILMRSHSLLRL 342
              L L+++ R   LL  
Sbjct: 370 FSILILILIFRPSGLLGE 387


>gi|86358924|ref|YP_470816.1| amino acid ABC transporter, permease protein [Rhizobium etli CFN
           42]
 gi|86283026|gb|ABC92089.1| amino acid ABC transporter, permease protein [Rhizobium etli CFN
           42]
          Length = 300

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 91/304 (29%), Gaps = 17/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G +G+++      + +G ++ +I+          L   
Sbjct: 8   LFNGLTLGSIYGLVAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLVLTSIFAGLPVA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +++     ++      +  + +A   L  S     ++                     
Sbjct: 68  ILLLAMLVVAMLMTSLWNWTIERVAYRPLRGSFRLAPLITAIGMSIVLSN---FIQVTQG 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +    +    +   +    ++L    L       +  TA+  A R    ++K
Sbjct: 125 PRNKPIPPMVSSVYQFGNISVSLKQIIIILITVVLLTVFWYIVNHTALGRAQRATEQDRK 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       F + +A   +AG  +       S     F+  +   +  +LGG+
Sbjct: 185 MAALLGVNVDQTISITFVMGAALAAVAGTMYLMYYGVASF-ADGFTPGVKAFTAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        ++  +  L        +  +  F               L  V++ +   
Sbjct: 244 GSLPGAVLGGLMIGLIESLWSAYFTIAYKDVATF-------------AILAFVLIFKPTG 290

Query: 339 LLRL 342
           +L  
Sbjct: 291 ILGR 294


>gi|157737052|ref|YP_001489735.1| ABC transporter, permease protein [Arcobacter butzleri RM4018]
 gi|157698906|gb|ABV67066.1| ABC transporter, permease protein [Arcobacter butzleri RM4018]
          Length = 368

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/333 (14%), Positives = 103/333 (30%), Gaps = 19/333 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  V +  L+           +  ++  + L + + A  L +V G LG+LSL     +
Sbjct: 26  VVVFVVSFCNLVIPSDSVFHISTFTVTLLGKYLAFALLALALDLVWGYLGVLSLGHGSFF 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+G Y++ +   R      +              +  LP      D    A L++  +  
Sbjct: 86  ALGGYAWAMYLMRQIGDRGVYGNAEMPDFMVFMNLKELPWFWLGFDNPLFAFLMVMFVPA 145

Query: 135 NILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSS 175
            +   +                             +  D  +     +        F  S
Sbjct: 146 FLAFIFGWFAFKSRVTGVYLSIITQALTYALMLAFFRNDMGFGGNNGLTDFKDILGFDLS 205

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                + +  +      L   +  ++  + +     +IRD +     L   +   KL  F
Sbjct: 206 ADTTRVGLLIITFIALALGYLLCRFIINSRLGRVVISIRDAESRVRFLGYRVEQYKLFIF 265

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            VS+   G+AGA +      I+P +F    +I ++  V +GG  +L        ++    
Sbjct: 266 VVSAVLAGIAGALYVPQVGIINPGVFSPLFSIELVIWVAIGGRGTLYGAIIGAIVVSLAS 325

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
                +    +   L         +    V+ +
Sbjct: 326 SYFTSVLPEVWLYALGALFVIVTLYLPKGVVGI 358


>gi|90022616|ref|YP_528443.1| putative branched-chain amino acid transport system permease
           [Saccharophagus degradans 2-40]
 gi|89952216|gb|ABD82231.1| inner-membrane translocator [Saccharophagus degradans 2-40]
          Length = 307

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 91/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++ A GL+I+ G +G++++      A+GAY+   + +        L+    + 
Sbjct: 21  ISLFSVLLLMALGLAIIFGQMGVINMAHGEFMAVGAYTTYFISTLTEAYFPELMSYYFVF 80

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     +M      F      +   +       +L  W      +           +   
Sbjct: 81  AILVAFVMAGALGYFAE--FILIRHLYKRPLDTLLATWGLSLIMQQAFRSIFGAREVSPA 138

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P+  +   +   +VL     ++  +   L +++     R    N+    +
Sbjct: 139 LPDWLMGSYQPTDTIDIPLNGMFVLGLTTLVTLGVFYLLFKSSWGLRVRATTQNRVMSGA 198

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           FA+     G+AGA F       +         +    +V+ GG  SL 
Sbjct: 199 VGINTKKIDRYTFALGCGIAGIAGAAFTTIAS--TGPTTGSLYIVDTFMVVVFGGAGSLV 256

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     +           +                +AL L+++ +   L   
Sbjct: 257 GTISSAFSIAQAQSILEFFISGSMAKVYTL-------------LALVLILMFKPEGLFAS 303

Query: 343 R 343
           +
Sbjct: 304 K 304


>gi|163733583|ref|ZP_02141026.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
 gi|161393371|gb|EDQ17697.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
          Length = 418

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/367 (13%), Positives = 106/367 (28%), Gaps = 37/367 (10%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +  +L L  +   +L   F     S  ++ ++G + L   + A  + +V G  G+LSL  
Sbjct: 23  FLGLLALFTLGVTILAEGFGVGVISTSFVKTLG-KTLCLCLVALAMDLVWGYCGILSLGH 81

Query: 71  VIAYAIGAYSYVILGSRYGLSIWL-------------------------------LIPVS 99
           +  + IG Y+  +        I +                                 P  
Sbjct: 82  MAFFGIGGYAIGMWLMYARTEIIVRESLANAPLPPTPQEVSDGIATQIFGVVGASEFPPI 141

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             ++ +  + +    +      L    L        + +         A      +    
Sbjct: 142 WAVAHSLPLQLAAVVVVPGLIALIFGWLAFRSRVTGVYLSILTQAMTLALALYLFQNDSG 201

Query: 160 GTTVRSLIRFFRFPSSFVI----YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                 L      P    +      ++ ++       L   +   +      +  R IRD
Sbjct: 202 LRGNNGLSGLQNLPGLSNVPQSTVSMWFFWASALALGLGYLLCAAVVSGKFGSVIRAIRD 261

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++     L  ++   KL  F  ++    +AGA +      I+P       +I +   V +
Sbjct: 262 DEARVRFLGYSVEAYKLFIFTFTAILAAIAGALYYPQAGIINPAEIAPIASIYLAVWVAI 321

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG   L       A +  +     G      N    +   +    T L+ ++   V L  
Sbjct: 322 GGRGRLYGAVIGAAFVSLLSTWFTGGQAPDINLGF-YTIQWVNWWTILLGLSFVAVTLFA 380

Query: 336 SHSLLRL 342
              +  L
Sbjct: 381 PRGIGGL 387


>gi|33866970|ref|NP_898529.1| putative membrane protein of ABC transport system [Synechococcus
           sp. WH 8102]
 gi|33639571|emb|CAE08955.1| Putative membrane protein of ABC transport system [Synechococcus
           sp. WH 8102]
          Length = 375

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/341 (12%), Positives = 93/341 (27%), Gaps = 31/341 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +   ++  +         +  ++  + L   + A G+ ++ G  GLLSL   I +A+G
Sbjct: 13  IVLWVLIIAAIVAAPAVLPVFRLNLLGRFLSLAIVALGIDLIWGFTGLLSLGQGIFFALG 72

Query: 78  AYSYVILGSR------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
            Y+  +                           A  +    P       +L  A L    
Sbjct: 73  GYAAAMYLQLNSSGELPNGIPEFFSLYGVDQLPAFWLPFHSPLFTLVAIWLVPAVLAAVL 132

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTV-----------RSLIRFFRFPSSFVIYE 180
                  + K +             +                   +   F         +
Sbjct: 133 GNLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDVTELFGQMVGSAEMQ 192

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
              +++   +  L+   + W+ R    +    IRD++             K   FA++  
Sbjct: 193 RSFFWLTAVVVILAWLFLRWVVRGRFGDVLIAIRDDEPRLRFAGYNPTLFKTIVFAIAGG 252

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             G+ GA +      +SP       +I ++  V +GG  +L        ++     L   
Sbjct: 253 LAGIGGALYTVQSGIVSPQYMTVPFSIEMVIWVAVGGRGTLVGAILGAVVINYAKSLVSE 312

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                         +       +      LV+      ++ 
Sbjct: 313 --------------ALPQSWLFIQGGLFILVVTALPEGVIG 339


>gi|78185815|ref|YP_378249.1| putative membrane protein of ABC transport system [Synechococcus
           sp. CC9902]
 gi|78170109|gb|ABB27206.1| putative membrane protein of ABC transport system [Synechococcus
           sp. CC9902]
          Length = 375

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/344 (12%), Positives = 95/344 (27%), Gaps = 31/344 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             L+     ++  +    +    +  ++  + L   + A G+ ++ G  GLLSL   I +
Sbjct: 10  WLLVIFWVLIIAAIVAAPSVLPVFRLNLLGRFLALAIVALGIDLIWGFTGLLSLGQGIFF 69

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+G Y+  +          L              +           +  +A  ++  +  
Sbjct: 70  ALGGYAAAMYLQLNSSEDLLNGIPEFFTLYGVDRLPAFWQPFHSPLFTLVAIWLIPGVLA 129

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTV-----------------RSLIRFFRFPSSFV 177
            +L         K   +       L                       + + F       
Sbjct: 130 ALLGNLVFRNRVKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDVTQLFGQMVGSP 189

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
             +   ++V   M   +   + W+ R    +    IRD++             K   FA+
Sbjct: 190 EMQRGFFWVTAVMVIFTWLFVRWVVRGRFGDVLIAIRDDEPRLRFAGYNPTLFKTLVFAI 249

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           +    G+ GA +      +SP       +I ++  V +GG  +L         +     L
Sbjct: 250 AGGLAGIGGALYTVQSGIVSPQFMTVPFSIEMVIWVAVGGRGTLVGAILGAVAINYAKSL 309

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                            +       +      LV+      ++ 
Sbjct: 310 VSE--------------ALPQSWLFIQGGLFILVVTALPEGVIG 339


>gi|90421199|ref|ZP_01229100.1| permease protein, ABC-type branched-chain amino acid transporter
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90334576|gb|EAS48359.1| permease protein, ABC-type branched-chain amino acid transporter
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 382

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/347 (13%), Positives = 96/347 (27%), Gaps = 36/347 (10%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            +  +    L + +    +  +  ++  + L Y   A GL +  GS G+LSL   I + +
Sbjct: 13  AIGFLLLAALLIVVIPAMTDAFRLNLVGKYLTYAFVAVGLVLCWGSAGILSLGQGIFFGL 72

Query: 77  GAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           G Y   +                       +                          L  
Sbjct: 73  GGYCMAMFLKLEASTPEATAIQSTPGIPDFMDWNQLTELPFFWEPFHSFGFTLLAVVLVP 132

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPS 174
           A L     F     +   +        +A  L  L    +                 +  
Sbjct: 133 AILAFVIGFAMFTRRVGGVYFAIITQAIAAILTILIIGQQGYTGGVNGITDLRTLHGWDI 192

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                +  +Y+V   +   +  + + +R + +      +RD +         +   K   
Sbjct: 193 RTDDAKTILYFVNALLLLGAIGLSMLVRNSKLGRILVALRDKEDRVRFSGYDVAAFKTFV 252

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F  ++A  G+ GA F      +SP       +I ++    +GG  SL      T ++   
Sbjct: 253 FCFAAALAGVGGAMFTLQVGFMSPTFVGIVPSIEMVIFCAVGGRLSLIGAVYGTLLVNWA 312

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                            F  SF       M     +V+++  + L  
Sbjct: 313 KT--------------SFSESFPELWLFAMGALFIVVVMVFPNGLAG 345


>gi|84514516|ref|ZP_01001880.1| branched-chain amino acid ABC transporter, permease protein
           [Loktanella vestfoldensis SKA53]
 gi|84511567|gb|EAQ08020.1| branched-chain amino acid ABC transporter, permease protein
           [Loktanella vestfoldensis SKA53]
          Length = 391

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 54/367 (14%), Positives = 102/367 (27%), Gaps = 36/367 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +   L  L  V   +L   +GA      +  +    L   + A  + +V G  G+LSL  
Sbjct: 17  WFMGLLGLFTVIVTILSEGMGAGVMSTNMVKILGMTLCLCLIAIAMDVVWGYCGILSLGH 76

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVS------------------------------- 99
              + +G Y+  +        I +   ++                               
Sbjct: 77  FAFFGLGGYAIGMWLMYARTEIVIRDNLAQGAIPATETEVAEAVASQIFGVVGSSDLPLI 136

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
              +G+    + L  L      L    L        + +         A      +    
Sbjct: 137 WTFAGSLPAQLALVVLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLYLFQNDTG 196

Query: 160 GTTVRSLIRFFRFPSSF----VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                 L      P +      +  ++ ++       L   +  W+      +  R IRD
Sbjct: 197 LRGNNGLSGLQNIPGALDVPQAVISVWFFWASALALGLGYVLFAWVVSGKFGSVIRAIRD 256

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N+     L   +   KL  F +++   G+AGA +      I+P       +I +   V +
Sbjct: 257 NEARVRFLGYNVEAYKLFVFTITAVVAGIAGALYYPQAGIINPAQIAPIASIYLAVWVAI 316

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG   L       A +  +     G        L      +      L+ +    V L  
Sbjct: 317 GGRGRLYGAVIGAAFVSLLSSWLTG-GGAPNIELGPLRIIWTDWWLVLLGLGFVAVTLFF 375

Query: 336 SHSLLRL 342
              +  L
Sbjct: 376 PKGIGGL 382


>gi|254452818|ref|ZP_05066255.1| ABC-type branched-chain amino acid transport system, permease
           protein II [Octadecabacter antarcticus 238]
 gi|198267224|gb|EDY91494.1| ABC-type branched-chain amino acid transport system, permease
           protein II [Octadecabacter antarcticus 238]
          Length = 307

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 55/309 (17%), Positives = 119/309 (38%), Gaps = 29/309 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR----------- 87
           + +      ++ +    L++     G+++   V  +A GAY+Y I               
Sbjct: 7   VLATLTFGAVFSVLTLSLNLQYARGGMINFGTVAYFAAGAYAYAIFTQEPPSGLDQYWFG 66

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
           + L  ++ +  + + S    +I G P+L+ RG+YLA+ T   +E+F ++L+  + I NG 
Sbjct: 67  FDLPWYIGLLAAGVASLLFALITGWPTLRLRGEYLALTTFAFAEVFHSVLLNERRIGNGS 126

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
            G+   +R                     +   +      + +  ++A +   L ++   
Sbjct: 127 VGLANVERPDPTTL--------------GLNDTVGYALAAVILMLVTAYVFNRLLKSPFG 172

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
            A   + D++ A  ++       +L  F +S+  IG AGA +A     ++P +F      
Sbjct: 173 RAIDAVHDDEIAAQAVGKDDARIRLQVFIISAVPIGFAGALYAMITTLVAPALFTAEVTF 232

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            V   + LGG  ++         L+   E+   + F    +        +     +  I 
Sbjct: 233 FVWIALALGGEKTIIGAILGAMALVLFQEIVGAIPFETVRA----AQIASSVEEIVTGIL 288

Query: 328 LFLVILMRS 336
             +V+ +R 
Sbjct: 289 FIIVLRLRP 297


>gi|160937946|ref|ZP_02085304.1| hypothetical protein CLOBOL_02840 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439172|gb|EDP16926.1| hypothetical protein CLOBOL_02840 [Clostridium bolteae ATCC
           BAA-613]
          Length = 293

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 93/305 (30%), Gaps = 26/305 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +       Y + A G ++V G L L++      + +  Y  +   +      ++ IPV+
Sbjct: 11  LTGISLGGAYALIAIGYTLVYGILRLINFAHGDIFMMAGYFMIFAMASLP--WFIAIPVT 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++   G+ +   + +       ++ +I +     +L                +  +  
Sbjct: 69  LIVTILLGVTIERVAYRPLRSAPRMSVMISAIGVSYLLQNLATYLFTALPKGYPEIPFLK 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                       F    +      +   +    L   +IL +  T I  A R +  + + 
Sbjct: 129 KI----------FRIGGLSASFVTFLTPVLTLVLVYLLILLINHTKIGMAMRAVSKDYET 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   I       FAV S   G+    +   R  + P        +      + GG+ 
Sbjct: 179 ASLMGIKINKTITFTFAVGSLLAGIGSILYFTDRMTVFPFS-GALPGLKCFVAAVFGGIG 237

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        IL         M    F+    F             I L +++L+R   L
Sbjct: 238 SIPGAVIGGFILGLGETALVAMGQSTFSDAFTF-------------ILLIVMLLIRPTGL 284

Query: 340 LRLRT 344
              +T
Sbjct: 285 FGEKT 289


>gi|260459955|ref|ZP_05808208.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259034166|gb|EEW35424.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 341

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 66/328 (20%), Positives = 124/328 (37%), Gaps = 33/328 (10%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +   +  +      S  ++  +G   LI+ M    L ++ G  G++SL  +    I AY+
Sbjct: 24  IILGVALVLYPLVASDFFLTQIGGYSLIFGMLGLSLMLLAGYGGMVSLAQITVAGISAYA 83

Query: 81  YVILGSR------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
             ILG+        G   WL +P + + +     ++G  S++  G Y  + TL ++    
Sbjct: 84  IAILGNNNSSILGLGWPWWLAVPFAVLAAALASALIGWISVRTEGIYTIMITLAIATATY 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
               +   I NG +G        F G   R                   YY+ LG+  LS
Sbjct: 144 YFAQQNYAIFNGHSGYAGIRAPVFWGIGWRDAK--------------PFYYLCLGLAVLS 189

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            + +L+  R+      + IRDN +   +L   +   K+ A+A++    G+AG        
Sbjct: 190 YAAVLYGSRSTFGMTLQAIRDNPRRMRALGYHVTAHKVVAWALAGVIAGLAGVLLVWFNG 249

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           R+SP        I V+ I ++GG+           +++ +                  D 
Sbjct: 250 RVSPGTIGVDAAIDVLIIAVIGGLRHPIGPFLGALVVVLMQT-------------FAIDI 296

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
               R  TL+ +   +++ +    +L L
Sbjct: 297 VGAERFNTLIGLVFLVIVFVSPDGILGL 324


>gi|218887837|ref|YP_002437158.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218758791|gb|ACL09690.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 301

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 90/289 (31%), Gaps = 3/289 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L L++      + IGAY    L + +GLS ++  P 
Sbjct: 8   LTNGLAVGGIYALIALGYTMVYGVLKLINFAHGDLFTIGAYLGFTLFTAFGLSGFVSGPG 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++     M +                   S +  + ++     +       +      
Sbjct: 68  GVLLVLVMVMGLVALIGFLLERVAYRPLRSSSRL--SAVVSALGASIFFQNAVMLIYGAK 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +   +      +   +    ++     L  ++  + +RT I  A R    +Q 
Sbjct: 126 FQVYPNDIRPSYVLSIMGIDVPLVRIMMIAASLGLMLALYWFTQRTRIGAAIRATAIDQG 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       F +  A  G+AG        ++   M  +   +   +  ILGG+
Sbjct: 186 AAKLMGIDVNRVISLVFMIGPALGGVAGVMVGLYYGQVDFTM-GWVYGLKAFTAAILGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            ++        +L  +  L        +   + F     +       + 
Sbjct: 245 GNIPGAMVGGLLLGVIEALGAAYISIAWKDAIAFLVLILILIIRPTGLL 293


>gi|254489237|ref|ZP_05102441.1| ABC-type transporter, permease component [Roseobacter sp. GAI101]
 gi|214042245|gb|EEB82884.1| ABC-type transporter, permease component [Roseobacter sp. GAI101]
          Length = 431

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/336 (13%), Positives = 114/336 (33%), Gaps = 23/336 (6%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R+      L L   +  +++ +FL    +     ++  Q+ I ++FA   ++++G  G+L
Sbjct: 15  RMRAGSMTLTLAPWLIAIVVLVFLPMVFTNNSALTIMNQMSITIVFALAYNMLLGQGGML 74

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S    +   +G ++ + + +       + + +  +  G  GM + +    F         
Sbjct: 75  SFGHAVYAGVGGFACMHIMNMSDFFETIPLVILPIFGGLFGMGLAMIVGSFSTRSAGTVF 134

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
            ++S     ++            + +                   F     + +I +YY+
Sbjct: 135 AMISLGVGELI--------AACSVIIVAFFGGEEGISGDRTYANPFFGIEFLQQIEVYYL 186

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            +    +SA+++    RT +      +RDN +    L  +  + +  +F  S  F G+AG
Sbjct: 187 TIAWLVISAALMYLWSRTPVGRMANAVRDNPERAEFLGYSSRWVRYYSFVASGFFCGIAG 246

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             FA + + ++ +    + + +++ +  LGG+               +  +         
Sbjct: 247 GLFAINYEILTEENLNTTSSGVILLVTFLGGVGFFFGPIIGAIAFTLLQTVLS------- 299

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                              +     ++     L  L
Sbjct: 300 --------LSTELWAFYAGVLFVATVMFFPGGLAGL 327


>gi|260433660|ref|ZP_05787631.1| branched-chain amino acid ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417488|gb|EEX10747.1| branched-chain amino acid ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
          Length = 280

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 106/260 (40%), Gaps = 12/260 (4%)

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           ++    G+   +  P++ +++G  G+ + +P+L+  G YLAI TL +S +  ++++  +P
Sbjct: 1   MIVIEAGVPFLVAFPLAGILTGIAGVTVAIPALRLHGIYLAIFTLALSILMDDLIVLAEP 60

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           IT G AG Y+              +  F             ++++L +  L     + L 
Sbjct: 61  ITGGVAGKYM------------GGVEIFGHLVDRWGTPEQFFWLVLAVTVLVTLGYINLL 108

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           RT +  ++  +RD++ +  ++   I   K  +FA+S A  G AGA         + + F 
Sbjct: 109 RTPLGRSFIAVRDSEVSAQAMGIDIARTKTVSFALSCAVTGWAGALMGLYAGAFNNESFS 168

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
              +I ++ ++++GG+ S+        I+  + +                  +       
Sbjct: 169 VVISIQLLMMIVIGGLGSIHGAFLGAIIIGFLPQFLSIAKENVGALFGGSTVAIPGLEFG 228

Query: 323 LMVIALFLVILMRSHSLLRL 342
           +  + L   IL     +   
Sbjct: 229 IFGMILIGFILFEPMGIYGR 248


>gi|297563510|ref|YP_003682484.1| inner-membrane translocator [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847958|gb|ADH69978.1| inner-membrane translocator [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 363

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 55/295 (18%), Positives = 112/295 (37%), Gaps = 17/295 (5%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW-LLIPVSAMISG 104
           +   ++   GL ++VG  G +SL       IGAY+  +L     +    + + + A  S 
Sbjct: 66  VGYTMLAVAGLQLLVGGSGQVSLGHGAFMMIGAYTMALLVLYQPMLPLAVNLLLIAGASA 125

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
             G+ +G  + +  G YLA ATLI++     +  ++  +  G  G+ +            
Sbjct: 126 VAGIAVGAATARLHGPYLAGATLILAVGLPGLTHRYHELLGGSNGLNI------------ 173

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
                       V    +   V+     +  +++  +    +    R IRD++ A     
Sbjct: 174 RTAGAPPLLQGLVTDSEWKALVVWTAVVIGLAVLATVSTGRLGRRMRAIRDDETAAAMAG 233

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
             +   K+ AF ++SA  G+AG   A      +P  F  + ++ +++ ++LGG+ SL   
Sbjct: 234 IPVGTTKVVAFVIASAAGGLAGGLQAYVLGTATPSTFTLALSLTLLAALVLGGIGSLWGA 293

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
             A   ++ +      +      S      + N        + L LV+      +
Sbjct: 294 LWAAVAIVYLEVWVADLAGTLGLS----RDAENNLPIVFFGVVLILVLRFWPLGI 344


>gi|312199293|ref|YP_004019354.1| ABC transporter [Frankia sp. EuI1c]
 gi|311230629|gb|ADP83484.1| ABC transporter related protein [Frankia sp. EuI1c]
          Length = 957

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 54/270 (20%), Positives = 101/270 (37%), Gaps = 12/270 (4%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
           S RL +              +L        +     +      ++ +    + +V G  G
Sbjct: 308 SGRLPRAGSGRLRPVTGLVWVLAAVAIPLFAAPSWSAAMTNSALFGLLGLSVVVVTGYAG 367

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            +S+ C      G+++     S   L   + + V    +   G++ G P+++ RG  LAI
Sbjct: 368 QISVACAALAGFGSFAAARASSDLHLPFLVCLIVGTAAAVLLGVVFGAPAVRVRGVNLAI 427

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL +S   +N+++    +T G  G+++                 F    S   +     
Sbjct: 428 VTLGLSLAVENLVLSQPKMTGGLDGLHIHRP------------NLFGLDLSPSAHPDRFA 475

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           YV +    L    +L LRR         +R N++   +L  ++   KL AFA+S+   G+
Sbjct: 476 YVCIAAFVLCGLAVLNLRRGEAGRRLLAVRANERGAAALGVSVPGTKLGAFAISAGIAGL 535

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI 274
           AGA  A          F    +I V++  +
Sbjct: 536 AGALSAFQFQLADFTDFGVFRSISVLAFTV 565



 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 81/300 (27%), Gaps = 13/300 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           ++          Y + A G+  V    G+L+        +G+Y +       G      +
Sbjct: 6   QFALIGLAGGGAYALVALGVVAVYRGSGVLNFAQGAIGMVGSYVFWD--LHAGSEGGAGL 63

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA-------- 148
                 SGA   +   P++       A+  L+   +   +L     +    A        
Sbjct: 64  YGGTTSSGAVASLPVAPAMLIGVASGAVLGLLFYLLVVRLLRNVPDMAKVVATLGLMLLL 123

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
              V  R       +  L    +      +       +L+    L+  + L   RT +  
Sbjct: 124 QSAVVKRYGTESHLLPPLFGRGKIKILGGLVTYDTLAILVVTIGLAVGLSLMFSRTKLGM 183

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               +R+N  A   +  +     L  + V  A    AG                    I 
Sbjct: 184 NATALRENPTAASGIGISPHPTGLITWGVGGAMAAFAGILLIPVIGL--TPDALTLLVIP 241

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
            ++  ++G   ++         L     +    +      +     +  +    L   A+
Sbjct: 242 AMAAALVGRFNAVWTTVAIGLALGVAESVMRRYSI-NNGVISSVPFAVIIVTVVLGGAAM 300


>gi|163852794|ref|YP_001640837.1| urea ABC transporter, permease protein UrtB [Methylobacterium
           extorquens PA1]
 gi|163664399|gb|ABY31766.1| urea ABC transporter, permease protein UrtB [Methylobacterium
           extorquens PA1]
          Length = 308

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 95/301 (31%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   +YV+ A GL+I+ G +G++++       +GAY   +  + +   +  L      +
Sbjct: 22  LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTYLCSTFFQAYLPSLFGAYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           + A   +            L     +       +L  W      +           +G  
Sbjct: 82  AMALAFLASGAMGMLVEWAL--IRHLYKRPLDTLLATWGLSLILQQAYRTIFGPREVGVE 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           + S +      +  +  +I   +V+     ++  + + + R+      R +  N+    +
Sbjct: 140 LPSWMMGSIPVTDSIEVQINGLFVIAVTAVITVGVAVLMYRSRFGAQIRAVMSNRPMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +         + F +     G+AG+ F       +         +    IV+ GG  SL 
Sbjct: 200 VGIDTEKVDRTTFGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLIVVFGGAASLL 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++A+  ++++R   L  L
Sbjct: 258 GTIASAFSISQTQSTLEFFLSGSMAK-------------VLTLLAVVGILMLRPQGLFTL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|118576408|ref|YP_876151.1| ABC-type branched-chain amino acid transport system, permease
           component [Cenarchaeum symbiosum A]
 gi|118194929|gb|ABK77847.1| ABC-type branched-chain amino acid transport system, permease
           component [Cenarchaeum symbiosum A]
          Length = 329

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 58/338 (17%), Positives = 119/338 (35%), Gaps = 50/338 (14%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR---------- 87
           +I  +     IY++    L++  G  G+ +   V+A A GA+   ++             
Sbjct: 8   FISDLVAIFAIYLIINLSLNLEFGYGGVPNFGKVLAVAAGAFVVPMVTLSLLGAALSVDS 67

Query: 88  ---------------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
                                      +    +       G++   P+++ RGDYLAI  
Sbjct: 68  SGDNLAVVDEINRGLAAEPLLGVGVFAVAAIAAMAAGAGLGLVSAYPAVRLRGDYLAITL 127

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L   EI + + I ++P+  G  G+ V D L F+   +R                     V
Sbjct: 128 LAFGEIIRIVGINYEPLVGGTLGVSVPDVLSFVPDDLR---------------FASASVV 172

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           L  +  +   ++    R+ +    R  RD++ A  SL       ++    ++     + G
Sbjct: 173 LAAVAGVVYLLVSRFTRSPVGRLLRATRDDEVALQSLGRDPAKVRIKVLMLAGMIGALGG 232

Query: 247 AFFAASRD-RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
             +A+  +  I+    + +   +   +VI+GG+ +   +   T I + + +L    N  +
Sbjct: 233 MMYASYAEGVIAFGYNRLNWTFLPFVMVIVGGLANNKGVLLGTFIFVVIRKLVVYYNDNF 292

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
              +             L+   +  V+L R   +L  R
Sbjct: 293 EGFV---PFDIIWLDYLLLGGLMLAVLLFRPKGILPER 327


>gi|328545452|ref|YP_004305561.1| branched-chain amino acid ABC transporter (permease protein);
           livM-like protein [polymorphum gilvum SL003B-26A1]
 gi|326415193|gb|ADZ72256.1| Putative branched-chain amino acid ABC transporter (Permease
           protein); livM-like protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 324

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 61/306 (19%), Positives = 112/306 (36%), Gaps = 29/306 (9%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            ++ I  L   +     +I+ G  G  S      +  GAY+  +L  ++GL+ WL +   
Sbjct: 27  LNIVIMTLYAALLGQAWNILGGYGGQFSFGHAAFFGTGAYTVAVLQVQFGLNPWLGLAAG 86

Query: 100 AMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             ++ A    +G  + +   RG Y A+ TL  +E+ + IL    P T    GI +     
Sbjct: 87  GAVAVAVAAFIGFATFRYGLRGSYFALVTLAFAEVLR-ILANSVPFTGAGVGILIPLNQS 145

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                  S                  ++++  M   +  +  W+  +        +RDN+
Sbjct: 146 ATNLQFASKT--------------GYFWLIWAMALAAFLVAWWIGHSRFGARLMAVRDNE 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENIIVISIVILG 276
            A  +L       K+ A  +S  F G+AG F+A     + P   +  + ++  + + I+G
Sbjct: 192 DAARALGVDPFAVKMRAIMLSGLFSGLAGVFYAQYFLYLDPALAYGPAISVESLLVPIIG 251

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM +L       A L  + E+   +                     L    L L++L   
Sbjct: 252 GMGTLFGPLLGAAALHLLSEVTRELIG-----------DLPGISLVLYGTILILMVLFVP 300

Query: 337 HSLLRL 342
             L  L
Sbjct: 301 RGLAGL 306


>gi|256114356|ref|ZP_05455089.1| hypothetical protein Bmelb3E_16125 [Brucella melitensis bv. 3 str.
           Ether]
 gi|265995656|ref|ZP_06108213.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether]
 gi|265999322|ref|ZP_05465807.2| high-affinity branched-chain amino acid transport system permease
           LIVH [Brucella melitensis bv. 2 str. 63/9]
 gi|262766940|gb|EEZ12558.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether]
 gi|263093240|gb|EEZ17337.1| high-affinity branched-chain amino acid transport system permease
           LIVH [Brucella melitensis bv. 2 str. 63/9]
 gi|326409795|gb|ADZ66860.1| conserved hypothetical protein [Brucella melitensis M28]
 gi|326539511|gb|ADZ87726.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 302

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 102/313 (32%), Gaps = 33/313 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89
           + +      IY + A G ++V G +G+++      + +GA+         +  I      
Sbjct: 8   VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 67

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L + L++ V+ +++G     +   + +       +A LI +      L  +  +T G   
Sbjct: 68  LMLLLMMIVAMLLTGLWSWAIERVAYQPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             V   L                  S V   +    V++    L       + RT++  A
Sbjct: 128 KPVPQLLNGSYELF----------GSGVTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 177

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +    +AG  + +    IS     F   +  
Sbjct: 178 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 236

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +  L        +  +  F               L 
Sbjct: 237 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 283

Query: 330 LVILMRSHSLLRL 342
           +V++     +L  
Sbjct: 284 IVLIFMPSGILGR 296


>gi|298294087|ref|YP_003696026.1| urea ABC transporter permease UrtC [Starkeya novella DSM 506]
 gi|296930598|gb|ADH91407.1| urea ABC transporter, permease protein UrtC [Starkeya novella DSM
           506]
          Length = 364

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/329 (14%), Positives = 99/329 (30%), Gaps = 15/329 (4%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           +  L        +Y+ +   Q+  + + A  L ++ G LG+LSL   + +AIG Y   + 
Sbjct: 24  MPLLAGTPFGLSRYLTNAIGQLAAFAVLALSLDLIWGYLGILSLGHGLFFAIGGYVIAMY 83

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI------------ 132
             ++   +   +P      G            F    L +A  +   I            
Sbjct: 84  LLKHSFEVTGTVPDFLQFMGWKEFPFYWAGFDFFPYALFVAIAVTGLIAGLFGYVSFRSR 143

Query: 133 ---FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                  +I    +      ++  D  +     +      F +P         +    L 
Sbjct: 144 VGGVYFAIITQALVYVAMLLMFRNDTGFGGNNGMTGFAVAFGWPMGTSGMITALSVASLL 203

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +          L  +         RD++    +L    +  KL  + +S+    +AG  +
Sbjct: 204 VLAAVLLGCRLLVGSRFGALMLATRDDETRLRTLGYETLRLKLGVWCLSALIAMLAGMLY 263

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                 I+P +     ++ +   V +GG   L        ++  V           +  +
Sbjct: 264 VPQVGIINPRVLSPELSLEIAVWVAIGGRGHLVGAVIGALLVNAVKFWLSFAAPEVWPFI 323

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           L       +      +I L  + L+R   
Sbjct: 324 LSGLIVLVVLVFPNGLIDLAKLRLVRPMG 352


>gi|226360134|ref|YP_002777912.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226238619|dbj|BAH48967.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 466

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 89/309 (28%), Gaps = 27/309 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  L+  +   GLS++ G+ GL +        +GA +  ++   +G+ +     ++
Sbjct: 180 IDGLRFGLVIAIAGVGLSLIYGTTGLTNFAHGELVTLGAVAAWVINVTFGVQLIPATVLA 239

Query: 100 AMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             +    G++      K   +     IA L++S      L     I          D   
Sbjct: 240 VFVGILIGLLNNAAIWKPLRKRKTGLIAQLVVSIGLAISLRYLILIFFSDRAEPFVDYQA 299

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +                 +         +     +   + L L++T I  A R + DN+
Sbjct: 300 QVERHW-----------GPIAITDANLVCIGISLVVLVGVALLLQKTRIGKAMRAVSDNR 348

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS-RDRISPDMFKFSENIIVISIVILG 276
               S    +       + +      + G  F  S           F   +++ + + LG
Sbjct: 349 DLAASSGIDVERVIRFVWGLGGGLAALGGVLFGISELGGRVQWEMGFKLLLLMFAGITLG 408

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +         I+  +V+L   +       +        +                R 
Sbjct: 409 GLGTAYGALLGCVIVGLLVQLSTLVINPDLKYIGGLLILIVILVV-------------RP 455

Query: 337 HSLLRLRTP 345
             +L  R  
Sbjct: 456 QGILGSRQR 464


>gi|171186032|ref|YP_001794951.1| inner-membrane translocator [Thermoproteus neutrophilus V24Sta]
 gi|170935244|gb|ACB40505.1| inner-membrane translocator [Thermoproteus neutrophilus V24Sta]
          Length = 363

 Score = 75.3 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/340 (14%), Positives = 103/340 (30%), Gaps = 34/340 (10%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM- 101
            I   IY ++   L++  G LGL     V+  A+G  +   + ++  L I+     +   
Sbjct: 18  LIMFAIYGVYVLSLNLEAGYLGLPQFGKVMYLAMGGVAVGGIATKLALWIYGGAISAKAG 77

Query: 102 ------------------------------ISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                                         + G    ++ +         L +     + 
Sbjct: 78  ISPLKDLNTYCAAYQYQSIAVVNDIFKSSPLEGILFFLVAVALSALLAGVLGVVMAGPAL 137

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
             +   +    + + +    V+     +   V   +    F             V L   
Sbjct: 138 RLREDYLGILFLVSAELVRVVSTYTPQVACGVFGAVVPDPFAWMGDYRPWGYLAVTLLFL 197

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
             +  ++  L  +    A R IRD + A       I+  +     V+SA  G+AGA F  
Sbjct: 198 VFTFFMLDRLVNSPFGRALRAIRDAETAARVFGKDIVKFRARVLGVASALGGVAGALFVF 257

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               ++   F      +  +++++GGM +        A+   V      +  Y  +    
Sbjct: 258 YNTFVNMGQFVPYYTFVAWAMLMVGGMGNNVGALVGVAVYYIVS---RSLEIYKDSLRAV 314

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            +         +  I + ++++ R   L+  R       R
Sbjct: 315 INADPTFLQYIIFGIVIIVMVMFRPQGLVGERPSKTLSRR 354


>gi|307266490|ref|ZP_07548024.1| inner-membrane translocator [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918470|gb|EFN48710.1| inner-membrane translocator [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 294

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 95/303 (31%), Gaps = 23/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GA++ +       +S    +  
Sbjct: 8   LINGISVGSIYALIALGYTMVYGIIKLINFAHGDVYMLGAFAGLYATLVLKMSFVPALIF 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++    G+I+   + +   +   I  LI +     +L        G       +    
Sbjct: 68  SMIVCAILGIIIERLAYRPLRNSPKIVILITAIGVSLLLEYTTMFFLGPQPRAFPEVF-- 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                      +      V        ++     L   +   +  T I  A R +  + +
Sbjct: 126 -------KEVSYSLLGGKVTISNREILIIAVTVILMILLQYIVHNTKIGKAMRAVSYDMQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA    AG       +++ P M      +      +LGG+
Sbjct: 179 AARLMGINVDTTISITFALGSALAAAAGVLVGIYYNKVFPLM-GIMFGLKAFVSAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        IL     L  G     +   + F             + L +++L++   
Sbjct: 238 GIIPGAMTGGLILGITESLVSGYGSSLYRDPVAF-------------VILIIILLVKPSG 284

Query: 339 LLR 341
           L  
Sbjct: 285 LFG 287


>gi|254562558|ref|YP_003069653.1| branched-chain amino acid ABC transporter permease
           [Methylobacterium extorquens DM4]
 gi|254269836|emb|CAX25814.1| putative branched-chain amino acid ABC transporter, permease
           protein [Methylobacterium extorquens DM4]
          Length = 308

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 95/301 (31%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   +YV+ A GL+I+ G +G++++       +GAY   +  + +   +  L      +
Sbjct: 22  LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTYLCSTFFQTYLPSLFGAYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           + A   +            L     +       +L  W      +           +G  
Sbjct: 82  AMALAFLASGAMGMLVEWAL--IRHLYKRPLDTLLATWGLSLILQQAYRTIFGPREVGVE 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           + S +      +  +  +I   +V+     ++  + + + R+      R +  N+    +
Sbjct: 140 LPSWMMGSIPVTDAIEVQINGLFVIAVTAVITVGVAVLMYRSRFGAQIRAVMSNRPMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +         + F +     G+AG+ F       +         +    IV+ GG  SL 
Sbjct: 200 VGIDTEKVDRTTFGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLIVVFGGAASLL 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++A+  ++++R   L  L
Sbjct: 258 GTIASAFSISQTQSTLEFFLSGSMAK-------------VLTLLAVVGILMLRPQGLFTL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|254469631|ref|ZP_05083036.1| ABC transporter, permease/ATP-binding protein [Pseudovibrio sp.
           JE062]
 gi|211961466|gb|EEA96661.1| ABC transporter, permease/ATP-binding protein [Pseudovibrio sp.
           JE062]
          Length = 425

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 102/311 (32%), Gaps = 1/311 (0%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +Y     +L ++   L+ L +   +  +   S+   I I ++FA   ++++G  G+LS 
Sbjct: 16  ARYKFATRVLPLLLLALILLSIPLFEPSRTWLSLFNAIGINMVFALSYNMLLGQAGMLSF 75

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
              + + +G Y+ +   +    + +     +A    A  ++               +   
Sbjct: 76  GHAVYFGLGGYAAMHAMNAIENASYDGGVWAAFPMFALPLVGFAGGALAGAVIGWPSCRR 135

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
               F  I +    +    AG                 +         +     +Y+ + 
Sbjct: 136 AGVPFAMISLGIAELV-AAAGFMFISVFGGEEGITGDRMNGIELFGLSLGPLGEVYWFIA 194

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
              FL  +++    RT +    + +RDN +    +       +   F  +  F G+AG  
Sbjct: 195 FWTFLGTALMYAFTRTPLGKLAQAVRDNPERVQFVGYNPNRVRYLVFIAAGGFAGLAGGM 254

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            A + +  +P+      + +V+ +  +GG    +       +L  +       +  +   
Sbjct: 255 SAVNYEIFTPESLSVVPSGLVLLMAYIGGARYFAGPILGAVVLTYMQSNLSDYSEAWLLY 314

Query: 309 LLKFDCSFNMR 319
           L        + 
Sbjct: 315 LGLLFIGMILF 325


>gi|254391543|ref|ZP_05006743.1| branched-chain amino acid ABC transporter permease protein
           [Streptomyces clavuligerus ATCC 27064]
 gi|326440573|ref|ZP_08215307.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces clavuligerus ATCC 27064]
 gi|197705230|gb|EDY51042.1| branched-chain amino acid ABC transporter permease protein
           [Streptomyces clavuligerus ATCC 27064]
          Length = 310

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 105/305 (34%), Gaps = 7/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++      + IG +  + +       + L + +
Sbjct: 8   LANGLALGALYGLIAIGYTMVYGIVQLINFAHGEIFMIGGFGALTIYVWLPSGVSLAVAI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             MI G     +G+ +   R  Y     L  +     ++         +  ++       
Sbjct: 68  PLMIIGGAIAAVGVATAAERFAY---RPLRGAPRLAPLITAIGLSIALQQLVWGFYPDAK 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +           +  ++ +    +VL+       ++ L++ ++    A +    +  
Sbjct: 125 KHKSFPEFTGDAFRITDDLLIQRADAFVLILAPLCMLALGLFVSKSRSGRAMQATAQDPD 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        + AFAV +AF  +A   +   + +I+ +M  F   +   +  +LGG+
Sbjct: 185 TAKLMGINTDRIIVMAFAVGAAFAAVAAVAYGLDKGQINFEM-GFILGLKAFTAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L     L                 +++     +++I + LV   R   
Sbjct: 244 GNIYGAMVGGVVLGLAESLSIAYIEDIPGMSQLGGGAWSNVWAFVLLILVLLV---RPQG 300

Query: 339 LLRLR 343
           LL  R
Sbjct: 301 LLGER 305


>gi|254250568|ref|ZP_04943887.1| Inner-membrane translocator [Burkholderia cenocepacia PC184]
 gi|124879702|gb|EAY67058.1| Inner-membrane translocator [Burkholderia cenocepacia PC184]
          Length = 295

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 114/308 (37%), Gaps = 19/308 (6%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             ++  +     +Y   A GL++  G  GL++   +    +GAY+  I  S+ G  +   
Sbjct: 2   SSFVIHLLTVGCLYATMALGLNLQAGYAGLVNFGFIAFSGLGAYAAGI-ASQLGWPLPSA 60

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + ++   +GA  +++     +   DY  IATL ++EI + I +    +T G  GI     
Sbjct: 61  LALALAAAGALAIVVARLGRQISADYWGIATLAIAEILRTIALNESWLTGGAQGIGGIAP 120

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           L+       +               +    V  G   L+ +    L  +    A + +R+
Sbjct: 121 LFPGLRAPWAD--------------LAFLAVTAGCLALTYATYRRLTASRFGRALKVMRE 166

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
                       +  K  A    +    +AGA  A     + PD    SE   + ++V++
Sbjct: 167 EPALAVCFGYDPLALKTRASIAGALPAALAGALAAWYIGYVGPDAMIASETFALWTVVMV 226

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S   +   T I+    +    +  +  + L             L+ + L   +L R
Sbjct: 227 GGLGSHVGVLVGTLIV----QAVYALAPFLKDWLGVGSDLTGAVRLGLVGLMLLACVLWR 282

Query: 336 SHSLLRLR 343
            H L+  R
Sbjct: 283 PHGLVPER 290


>gi|311104568|ref|YP_003977421.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310759257|gb|ADP14706.1| inner-membrane translocator 19 [Achromobacter xylosoxidans A8]
          Length = 293

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 91/304 (29%), Gaps = 24/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP- 97
           +        +Y + A GLS+  G + +++        +  Y    L S +GL     +P 
Sbjct: 9   LLGGIASGAVYGLIALGLSLQFGVMKIINFAHGAFLMMSMYVCFALTSHFGLHPLAAMPL 68

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            +  +                    +   + +      + I         AG        
Sbjct: 69  TALALFAVGYACQRWLIDGIYRKESSREPIGVLIFTTGLWIFLDNAFLALAG-------- 120

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
               T+ +      +    +I+       L   C ++A+++L+LR T    A R    ++
Sbjct: 121 PDSRTIDAPWANEVWMPGDLIFTYPQIAGLFFACLITAALVLFLRHTRTGRAIRATGQDR 180

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +A   L          +FA+    +G AGA               F        IV+LGG
Sbjct: 181 EAASVLGIDSTRVYRLSFAIGLLVLGAAGALLLPLYPVNPFVGDIFGLR--AFVIVVLGG 238

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S++       ++  +  +   +    +                L+ +     +  R  
Sbjct: 239 IGSVAGAFWGGILVGVLESVGSQLIPITYAEA-------------LIFLLFLATMYFRPS 285

Query: 338 SLLR 341
            L  
Sbjct: 286 GLFG 289


>gi|262274114|ref|ZP_06051926.1| urea ABC transporter permease protein UrtC [Grimontia hollisae CIP
           101886]
 gi|262221924|gb|EEY73237.1| urea ABC transporter permease protein UrtC [Grimontia hollisae CIP
           101886]
          Length = 360

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/346 (15%), Positives = 100/346 (28%), Gaps = 33/346 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               V    L+         + Y  S+  + L + + A  + +V G LG+LSL     +A
Sbjct: 21  IGFVVPILNLIVPAGSVFHLETYTVSLLGKYLCFAILALSVDLVWGYLGILSLGHGAFFA 80

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +G Y+  +   R      +                 LP   F  D    A L+   +   
Sbjct: 81  LGGYAMGMYLMRQIGDRGVYGNPELPDFMVFLNWQELPWFWFGFDQFWFACLMAVAVPGL 140

Query: 136 ILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSF 176
           +   +  +                          +  +  +     +        F    
Sbjct: 141 LAFVFGWLAFRSRVSGVYLSIMTQAMTFALMLAFFRNEMGFGGNNGLTDFKDILSFSLQS 200

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
               I ++   +    L+  +   +  + +      IRD +     +   +  +KL  F 
Sbjct: 201 DATRIGLFVATVFALLLAYLLCRAVVVSRLGALTIAIRDAESRARFVGYRVENSKLWLFV 260

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           +S+A  G+AGA +      I+P  F    +I ++  V LGG  +L        ++     
Sbjct: 261 LSAAIAGVAGALYVPQVGIINPGEFAPLNSIEIVVWVALGGRATLYGAVIGAVLVNYAKS 320

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                          F   F       +     L  L     +  L
Sbjct: 321 W--------------FTVEFPEVWLFALGALFVLATLYLPKGVSGL 352


>gi|306829181|ref|ZP_07462371.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus mitis ATCC
           6249]
 gi|304428267|gb|EFM31357.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus mitis ATCC
           6249]
          Length = 289

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 105/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + ++ +L + +
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFLALII 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S   +   G+++   + +   +   I+ LI +     +L        G            
Sbjct: 65  SMAGTALLGVVIEFLAYRPLRNSTRISVLITAIGVSFLLEYGMVYLVGAN---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I   RF    +        +L     L   + L +++T +  A R +  +  
Sbjct: 115 -TRAFPQAIETIRFDFGPISLTNVQLMILAVSILLMVLLQLIVKKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|159028439|emb|CAO89882.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 316

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/319 (14%), Positives = 104/319 (32%), Gaps = 31/319 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG------------- 85
           + +      +Y +FA G +++   LG+++      + +GAY    L              
Sbjct: 10  VLNGLSIGSVYAIFALGYTLIFSILGIINFAHGAIFTLGAYFTYALTGGVFGFNGLLANA 69

Query: 86  -SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
              + L  +L + +  ++SG   +++   + K      + + L +       ++    I 
Sbjct: 70  KLPFSLPFFLALFLGCILSGFTSVLLERLAFKPLRVRGSDSLLTLVSSLGAAVVIVNVIQ 129

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                          G         F      V        + L    + A +  W+  T
Sbjct: 130 YLFGAEIYTFPDDIYGN--LPPAINFGTADRPVAIRTIQIIIFLVSAVMVALLTYWVNFT 187

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            +  A + + ++      L        +  F +S A  G+AG    +S   I+   F  +
Sbjct: 188 KMGKALQAVAEDVTTASLLGINPEKFIVITFFISGALAGLAGTLVGSSV-SIAGPYFGIA 246

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
             +  + +++LGG+ S+        +L                        ++     + 
Sbjct: 247 FGLKGLGVIVLGGLGSIPGAVIGGLLLGIAEAFV--------------PAEYSGYREAIA 292

Query: 325 VIALFLVILMRSHSLLRLR 343
              LF+++L+R   LL  +
Sbjct: 293 FAILFIMLLVRPQGLLGRK 311


>gi|148559546|ref|YP_001259631.1| branched-chain amino acid ABC transporter permease [Brucella ovis
           ATCC 25840]
 gi|254700437|ref|ZP_05162265.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella suis bv. 5 str. 513]
 gi|254708792|ref|ZP_05170603.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella pinnipedialis B2/94]
 gi|254714634|ref|ZP_05176445.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ceti M644/93/1]
 gi|254717532|ref|ZP_05179343.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ceti M13/05/1]
 gi|256030318|ref|ZP_05443932.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella pinnipedialis M292/94/1]
 gi|256160489|ref|ZP_05458178.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ceti M490/95/1]
 gi|256255695|ref|ZP_05461231.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ceti B1/94]
 gi|256370196|ref|YP_003107707.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Brucella microti CCM 4915]
 gi|260167992|ref|ZP_05754803.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Brucella sp. F5/99]
 gi|261222906|ref|ZP_05937187.1| inner-membrane translocator [Brucella ceti B1/94]
 gi|261316286|ref|ZP_05955483.1| inner-membrane translocator [Brucella pinnipedialis B2/94]
 gi|261750938|ref|ZP_05994647.1| inner-membrane translocator [Brucella suis bv. 5 str. 513]
 gi|261757437|ref|ZP_06001146.1| high-affinity branched-chain amino acid transport system permease
           LIVH [Brucella sp. F5/99]
 gi|265987352|ref|ZP_06099909.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1]
 gi|265998865|ref|ZP_06111422.1| inner-membrane translocator [Brucella ceti M490/95/1]
 gi|306841503|ref|ZP_07474203.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO2]
 gi|148370803|gb|ABQ60782.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ovis ATCC 25840]
 gi|256000359|gb|ACU48758.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Brucella microti CCM 4915]
 gi|260921490|gb|EEX88143.1| inner-membrane translocator [Brucella ceti B1/94]
 gi|261295509|gb|EEX99005.1| inner-membrane translocator [Brucella pinnipedialis B2/94]
 gi|261737421|gb|EEY25417.1| high-affinity branched-chain amino acid transport system permease
           LIVH [Brucella sp. F5/99]
 gi|261740691|gb|EEY28617.1| inner-membrane translocator [Brucella suis bv. 5 str. 513]
 gi|262553554|gb|EEZ09323.1| inner-membrane translocator [Brucella ceti M490/95/1]
 gi|264659549|gb|EEZ29810.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1]
 gi|306288467|gb|EFM59823.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO2]
          Length = 302

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 102/313 (32%), Gaps = 33/313 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89
           + +      IY + A G ++V G +G+++      + +GA+         +  I      
Sbjct: 8   VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 67

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L + L++ V+ +++G     +   + +       +A LI +      L  +  +T G   
Sbjct: 68  LMLLLMMIVAMLLTGLWSWAIERVAYRPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             V   L                  S V   +    V++    L       + RT++  A
Sbjct: 128 KPVPQLLNGSYELF----------GSGVTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 177

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +    +AG  + +    IS     F   +  
Sbjct: 178 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 236

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +  L        +  +  F               L 
Sbjct: 237 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 283

Query: 330 LVILMRSHSLLRL 342
           +V++     +L  
Sbjct: 284 IVLIFMPSGILGR 296


>gi|85860150|ref|YP_462352.1| branched-chain amino acid transport system permease [Syntrophus
           aciditrophicus SB]
 gi|85723241|gb|ABC78184.1| branched-chain amino acid transport system permease protein
           [Syntrophus aciditrophicus SB]
          Length = 300

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 91/304 (29%), Gaps = 17/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +     +  IY + A G ++V G + L++      Y IGA++ +I+     L+ +  I V
Sbjct: 8   LVGGLTRGSIYALIALGYTMVYGIIELINFAHGEIYMIGAFTALIVAGVLTLNGFSGISV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +                          + LI    ++       +  +   
Sbjct: 68  LILAAVFAVVYASAYGFTVEKIAYKPLRQA---PRLSPLISAIGMSIFLQNYVLLAQTSD 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L +F        I      +++     +   + L ++ T +  A R    ++ 
Sbjct: 125 FLPFPNLLPQFDFMAPYAHIMGSTELFIVATTALIMIFLTLLIKFTRMGKAMRATAQDRT 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   +     + F + SA   + G   A+   RI+     F   I   +  +LGG+
Sbjct: 185 MAMLTGVNVNRVISNTFILGSALAAIGGVLIASHIGRINFY-IGFIAGIKAFTAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L        G     +  +  F     +              + R   
Sbjct: 244 GSIPGAVLGGLVLGWTESFATGYVSSDYEDVFAFLLLVLVL-------------IFRPAG 290

Query: 339 LLRL 342
           LL  
Sbjct: 291 LLGR 294


>gi|91978829|ref|YP_571488.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91685285|gb|ABE41587.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 290

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 96/306 (31%), Gaps = 26/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GL++V G LG+++L     Y +GAY             W+    
Sbjct: 10  FLNAVQYGMVLFLVASGLTLVFGILGVINLAHGAFYMLGAYLAY----------WIAAYT 59

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +    G +     L    + + I  L   +    +L+ +  I        +      
Sbjct: 60  GNFLIALVGGVAIAFVLGLALESVFIRWLYGRDHLAQVLLSFGLILVIDEVRQLLFGKDV 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +      +S + Y ++   + +    ++A I + + RT I    R   +N++
Sbjct: 120 HSVAPPDWLSGSIQLTSNLSYPVYRLAICVFCLAVAALIFIVITRTKIGMIVRAGAENRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           FA   A   + G   A                I+   +V+LGG+
Sbjct: 180 MTRVLGIDYDKVNRLVFATGIALAALGGIVTAP--ISTVYPGMGDGMLILSFVVVVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++  A    ++                               L+ + +  V+L R + 
Sbjct: 238 GSVAGAAIGALLIGLTDTFGKVFFPSVSG--------------MLIYLLMAAVLLWRPNG 283

Query: 339 LLRLRT 344
           +L  R 
Sbjct: 284 ILGRRD 289


>gi|325971927|ref|YP_004248118.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy]
 gi|324027165|gb|ADY13924.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp.
           Buddy]
          Length = 305

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 85/303 (28%), Gaps = 14/303 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L  ++        +GAY  +        S  L +  
Sbjct: 10  LMNGLTLGGIYALIALGYTMVYGILKFINFAHGDVLMVGAYVGLFFFDLLRGSSPLGLWT 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                    +I    S         +A   + +  +   +      +       A     
Sbjct: 70  IVAF-FLAMLISMAFSALLGMFIERVAYKPLRKATRLAPLLSAIGVSFILSNGAAWMFGT 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V+       +L+    +   + L++ +T +  A R    +Q 
Sbjct: 129 HSRKFNYPFDNTPVHLGDVVITPHQILILVVSLAMMIILKLFVDKTRMGKAMRATSLDQG 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +  ++       FA+ SA   + G   A   D            +      ++GG+
Sbjct: 189 TAMLMGISVNRVISMTFAIGSALAAVGGILIA--LDFKVYATMGTMTGLKAFVAAVVGGI 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++S       +L  +      +                    T+    L +++L++   
Sbjct: 247 GNISGAMFGGILLGLLETFGVAIFG-----------IPTGLKDTIAFGVLIIILLVKPEG 295

Query: 339 LLR 341
           L  
Sbjct: 296 LFG 298


>gi|320530483|ref|ZP_08031541.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Selenomonas artemidis F0399]
 gi|320137316|gb|EFW29240.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Selenomonas artemidis F0399]
          Length = 290

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 87/303 (28%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G +++ G + L++      Y +GAY      +     +  ++  
Sbjct: 7   LINGVSLGSIYALIALGYTMIYGIIKLINFAHGDIYMVGAYLGFYAITLGIPVVPAILIS 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+ S     +        R        +    +   +               +   +  
Sbjct: 67  MAVTSLLGIAVERFAYRPLRHAPRISVLITAIGVSFLLE------------YVMMALVSP 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T  + I    +    ++       ++     L   +   +R T I  A R    + +
Sbjct: 115 TPRTFPATISDVSWTFEGLVISGQQLLIMGVTFVLMIILTYIVRATKIGKAMRAASYDTE 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +           FA+ SA   +AG       + I P M      I      + GG+
Sbjct: 175 AAQLMGINADRIISITFAIGSALAAVAGVLIGIYYNSIDPLM-GLMPGIKAFVAAVFGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L        +L  V     G  F  F     F               L LV+L+R   
Sbjct: 234 GILPGAVVGGIVLGIVEAFISGFGFSMFRDAAAF-------------AILILVLLLRPAG 280

Query: 339 LLR 341
           +  
Sbjct: 281 IFG 283


>gi|254698225|ref|ZP_05160053.1| branched-chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260762671|ref|ZP_05875003.1| branched-chain amino acid ABC transporter, ATP-binding/permease
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|260673092|gb|EEX59913.1| branched-chain amino acid ABC transporter, ATP-binding/permease
           [Brucella abortus bv. 2 str. 86/8/59]
          Length = 515

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 106/288 (36%), Gaps = 21/288 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLS 91
               KY   +   + I  +    L +V G  G++SL  +    +GA+ +  +        
Sbjct: 24  LGFPKYWVFLITAVFIVGIALQSLGLVAGRTGMISLCQMSFAGVGAWVTGYLNLIEAPGG 83

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + + + +  + +   G+ +GLP+L+ RG  LAI TL  +  F  +L              
Sbjct: 84  LAVWVLLGGLAAVPVGIAIGLPALRLRGINLAIVTLSFAAAFDTVLATIT---------- 133

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                       +   +  +L    + A ++ ++  + +  +W 
Sbjct: 134 ----------FPGQTSFTQVARPDLFANDRGYFLFVLLAYGIIAVVLEFISHSRLGASWL 183

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R +++A  +   +I  AKLSAFA+S+   G++G   A     +  + F   +++ + +
Sbjct: 184 AVRHSERAAAANGISIPRAKLSAFAISAFISGISGGLLAGYLGTLVAENFSMMQSLALFA 243

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  + G            +++   EL   +N       + F       
Sbjct: 244 VATMAGAHFTLGALIGGVLIVLFPELLRRLNLPQDIGNVFFALGAVQA 291


>gi|84502213|ref|ZP_01000361.1| possible ABC transporter, permease protein precursor [Oceanicola
           batsensis HTCC2597]
 gi|84389573|gb|EAQ02292.1| possible ABC transporter, permease protein precursor [Oceanicola
           batsensis HTCC2597]
          Length = 327

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 55/321 (17%), Positives = 128/321 (39%), Gaps = 22/321 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + ++ KI+ ++ +   + L   +             +++L + +FA   ++++G  GLLS
Sbjct: 21  MPRHQKIIFVVLLAVLIALPFMVYPVF--------AMKVLCFALFACAFNLLLGFGGLLS 72

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                 + + +Y        +GL+  L I      +   G+++G  +++ +G Y A+ TL
Sbjct: 73  FGHAAYFGMASYVCAHAAKVWGLTPELAILTGTATAAVLGLVIGSLAIRRQGIYFAMVTL 132

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +++     ++ +  T G+ GI    R                F    +  ++  Y+ +
Sbjct: 133 AFAQMVYFFALQAE-FTGGEDGIQSVPR-------------NDLFGLLPMKDDLTFYFFV 178

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L + +     I  +  +      ++IR+N+    SL   +   KL  F +S+ F G+AGA
Sbjct: 179 LAITYGGILFIYRITHSPFGQVLKSIRENEPRAVSLGYHVNRYKLMVFVLSATFAGLAGA 238

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             +      S     ++ +  V+ + +LGGM ++       AI++ +      +  +   
Sbjct: 239 TKSQVFHLASLTDVHWTMSGEVVLMTLLGGMGTVLGPIVGAAIVVTMQNYLAYLGAWVTV 298

Query: 308 SLLKFDCSFNMRHTTLMVIAL 328
                     +     ++  L
Sbjct: 299 IQGCIFVIGVLLFREGIIGVL 319


>gi|331266745|ref|YP_004326375.1| ABC transporter membrane-spanning permease-high-affinity
           branched-chain amino acid transport [Streptococcus
           oralis Uo5]
 gi|326683417|emb|CBZ01035.1| ABC transporter membrane-spanning permease-high-affinity
           branched-chain amino acid transport [Streptococcus
           oralis Uo5]
          Length = 289

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 104/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + +  +L + +
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMDFFLALII 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S   +   G+++   + +       IA LI +     +L        G            
Sbjct: 65  SMAGTALLGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I   RF    +        +L    FL   + L +++T +  A R +  +  
Sbjct: 115 -TRAFPQAIETVRFDLGPISLTNVQLMILAVSIFLMVLLQLIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|170738934|ref|YP_001767589.1| urea ABC transporter permease protein UrtB [Methylobacterium sp.
           4-46]
 gi|168193208|gb|ACA15155.1| urea ABC transporter, permease protein UrtB [Methylobacterium sp.
           4-46]
          Length = 308

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/301 (14%), Positives = 96/301 (31%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   +YV+ A GL+I+ G +G++++       +GAY   +  + +   +  L PVS  +
Sbjct: 22  LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYMTYLCSNVFQSHLPSLFPVSFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     +            L     +       +L  W      +           +G  
Sbjct: 82  AMGLAFLASGALGMLVEWAL--IRHLYKRPLDTLLATWGLSLILQQAYRSIFGAREVGVE 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           + S +      +  +  +I    V+     ++ ++ L L R+      R +  N+    +
Sbjct: 140 LPSWMMGSVQATETIEIQINGMVVMGVTALITLAVALLLFRSGYGKRVRAVMQNRVMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           F +     G+AGA F       +         +    IV+ GG  SL+
Sbjct: 200 VGIDTDKVDRLTFGLGCGIAGIAGAAFTMIGS--TGPTSGQLYIVDTFLIVVFGGAASLA 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++ +  +++MR   L  L
Sbjct: 258 GTIASAFSISQTQSTLEFFLSGSTAK-------------VLTLLGVVAILMMRPQGLFTL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|289581839|ref|YP_003480305.1| inner-membrane translocator [Natrialba magadii ATCC 43099]
 gi|289531392|gb|ADD05743.1| inner-membrane translocator [Natrialba magadii ATCC 43099]
          Length = 340

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/325 (10%), Positives = 92/325 (28%), Gaps = 16/325 (4%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
               +   + I     +  +Y + A GL++V G +G+L+        +GAY   ++    
Sbjct: 19  LFQPSTIARIIVEGLGKAAVYFVLAVGLTLVFGLMGVLNFTHGAMAMLGAYIGGLVMVLS 78

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN---------ILIK 139
                  +   A+      ++  L +        ++   I                ++++
Sbjct: 79  VSDGTGALVRIALFMVVLAVVFALLTGFGSAFEYSLIRPIYDRTPMYQILLTFGVALILE 138

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                   +     +  +             R+            + ++        + L
Sbjct: 139 EVTRIVVLSQGIQPEPPWSGAMATAPAAFTERYDILGAPIRGLYAFEIVLGIVAVVGVWL 198

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           +L RT      R   ++ +   +L   +  A    F + +   G+ G             
Sbjct: 199 FLNRTLYGLYIRAGSEDPEMVEALGIDVRQAFTIVFGLGTGLAGIGGVLLMWDPLWGPSA 258

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +      +    +VI+GG+ S      A  ++         +      +           
Sbjct: 259 LLAIDVLLYAFVVVIIGGLGSFKGTVAAAILVGIADSFTTWLFATGIVTFTGLPE----- 313

Query: 320 HTTLMVIALFLVILMRSHSLLRLRT 344
               +   L +++++R   L  +  
Sbjct: 314 --LTIFGLLVIMLIIRPQGLYGVEE 336


>gi|119384450|ref|YP_915506.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119374217|gb|ABL69810.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 332

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 60/335 (17%), Positives = 125/335 (37%), Gaps = 33/335 (9%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           LL V   L   L         ++  +      + +FA   ++++G  GLLS      +  
Sbjct: 24  LLLVAIALAGLLVAPMFLYPIFLMKLLA----FALFASAFNLLLGYTGLLSFGHATFFGG 79

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
            AY        +G S    I +    +   G++MG  +++ +G Y A+ TL +S++F   
Sbjct: 80  AAYFTAHAVKVWGWSPEAGILLGVAGAAVLGLVMGAIAIRRQGIYFAMITLALSQMFFFF 139

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            ++                       ++S+ R   F    +   + MYY +L +  +   
Sbjct: 140 CLQ--------------APFTHGEDGIQSVPRGHLFGLIDLNRPMNMYYFVLAVFVIGLL 185

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           II     +      ++IR+N++   SL  ++   KL AF +S+A  G+AG   A      
Sbjct: 186 IIRRFVNSPFGMILKSIRENEQRAISLGYSVQRYKLGAFVMSAALAGLAGGVKALIFQFA 245

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +     +  +  VI + +LGG+ +L        +++ +       +              
Sbjct: 246 TLTDVTWQMSGEVILMTLLGGIGTLLGPIVGAGLVVTLQNYLATSDVPV----------- 294

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
               T +  +   + +L+    L+     +   ++
Sbjct: 295 ----TIITGVVFMVCVLLFRRGLVGEFFATKIGKK 325


>gi|331694390|ref|YP_004330629.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326949079|gb|AEA22776.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 338

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/310 (16%), Positives = 120/310 (38%), Gaps = 29/310 (9%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
               +    +    L Y     GL ++VG L ++       +  G Y+ V+L  + GL +
Sbjct: 24  FVVPENRVLLLNAFLAYGALVVGLDLLVGDLRMMPAGHAAFFGAGGYATVLLYQKAGLPL 83

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDY-LAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            +   ++ +I      ++GLP++     +  AI T    E+   ++        G +G+ 
Sbjct: 84  PVAGAIAVLIVAVLATLIGLPAVGRSSGFSFAIITFAFGELLIQLIANVPGFFGGSSGLT 143

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           +   +        S+ R             +    L+ +  +   +++ +R + +    +
Sbjct: 144 IDWGVGSDMPFDFSVYR-------------YFTLWLVAVLVVVMLVVVLVRNSHLGLRMK 190

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R ++     L       K  AF ++S   G+ G F+A     ISPD    +++I+++ 
Sbjct: 191 AVRADENGTRGLGFNPTTYKAVAFVLASTLAGLVGVFWAPMNGFISPDTLGVNQSILLLG 250

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           ++I+GG+  ++      A+L  +  +                    +  T L+   L +V
Sbjct: 251 MLIIGGVGRITGALVGVALLASLPAIVE---------------MDPVLRTVLVGALLAVV 295

Query: 332 ILMRSHSLLR 341
            L++   ++ 
Sbjct: 296 ALLQPAGIVG 305


>gi|326315057|ref|YP_004232729.1| urea ABC transporter permease UrtB [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323371893|gb|ADX44162.1| urea ABC transporter, permease protein UrtB [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 304

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 91/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++   GL+I+ G +G++++       IGAY+  +  +         +P    +
Sbjct: 18  LSLFAVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTIYLGSTLTAQYAPGFMPFYFPL 77

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           + A        +       L     +       +L  W      +           +  T
Sbjct: 78  AIAAAFGFAFVAGWLVEWGL--IRHLYKRPLDTLLATWGISLALQQCFRTFIGPKEVSPT 135

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P+  +   +   +VL     ++A +++ L ++      R    N+    +
Sbjct: 136 LPDWLMGSWAPAEGLDIPVNGLFVLALTVVVTAGVLIALHKSRWGLRVRATVSNRVMANA 195

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           FA+     G+AGA  A +    +         +    +V  GG  SL 
Sbjct: 196 IGIDTKKTDRLTFAIGCGIAGVAGA--AFTTIGSTGPTSGSLYIVDAFLVVTFGGAASLL 253

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     +           ++                 + L++++R   L   
Sbjct: 254 GTVVSAFGIAQTQSITEFFLAGSMAKVITLS-------------LIVLILMVRPQGLFAS 300

Query: 343 R 343
           +
Sbjct: 301 K 301


>gi|256061816|ref|ZP_05451951.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella neotomae 5K33]
 gi|261325820|ref|ZP_05965017.1| inner-membrane translocator [Brucella neotomae 5K33]
 gi|261301800|gb|EEY05297.1| inner-membrane translocator [Brucella neotomae 5K33]
          Length = 302

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 102/313 (32%), Gaps = 33/313 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89
           + +      IY + A G ++V G +G+++      + +GA+         +  I      
Sbjct: 8   VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 67

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L + L++ V+ +++G     +   + +       +A LI +      L  +  +T G   
Sbjct: 68  LMLLLMMIVAMLLTGLWSWAIERVAYRPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             V   L                  S V   +    V++    L       + RT++  A
Sbjct: 128 KPVPQLLNGSYELF----------GSGVTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 177

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +    +AG  + +    IS     F   +  
Sbjct: 178 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 236

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +  L        +  +  F               L 
Sbjct: 237 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 283

Query: 330 LVILMRSHSLLRL 342
           +V++     +L  
Sbjct: 284 IVLIFMPSGILGR 296


>gi|163856965|ref|YP_001631263.1| putative ABC transport protein, inner membrane component
           [Bordetella petrii DSM 12804]
 gi|163260693|emb|CAP42995.1| putative ABC transport protein, inner membrane component
           [Bordetella petrii]
          Length = 309

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 94/305 (30%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +GL++        IGA +  ++ S        +   
Sbjct: 8   LINGLTLGSVYALVALGYTMVYGIIGLINFAHGDVVMIGAMAATMIASAMVGGDPTVSAF 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +G   ++     +        +A   +    +   +      +             
Sbjct: 68  AVLGAGL--LVSVPLCMAVGWTAERMAYRPLRRAPRLAALITAIGVSIILQNLAMMVWGR 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  ++    +  +          ++L    +   ++  + +T +  A R    N++
Sbjct: 126 NYLNFPQVLEPQVYELAGARMSSLQMAIVLIAALIMGGLLAVVHKTRLGTAMRATAQNRE 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   I     +AF + SA   +AG         ++     F   +   +  +LGG+
Sbjct: 186 VAGLMGVNINTVISAAFLIGSALAAVAGMMVTTYYG-VAQYTMGFMLGLKAFTAAVLGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L  +  L  G         L            L+++      + R   
Sbjct: 245 GNLVGAMAGGLLLGIIESLGAGYIGDLTGGFLGSHYQDVFAFVVLVLVL-----IFRPSG 299

Query: 339 LLRLR 343
           LL  R
Sbjct: 300 LLGER 304


>gi|84616856|emb|CAJ13750.1| Branched-chain amino acid ABC-type transport system, permease
           components [Desulfococcus multivorans]
          Length = 303

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 96/304 (31%), Gaps = 15/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++      +A G Y  VIL   +    +L    
Sbjct: 8   LINGLTLGGLYALIALGYTMVYGVIQLINFAHGELFAAGGYVGVILLGYFTGRGYLETHP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              + GA  + MG  +    G        +  +    +L+    ++   +   +  +  +
Sbjct: 68  ILCLIGAFALTMGYCAFLAVGVEKVAYKPLRRQPRLAVLLSALGMSIFLSNALMLTQGVY 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S +    F    V        +L     L   + L + RT I  A R    ++ 
Sbjct: 128 DKAY-PSELFQGGFDLGGVTISYLRIMILAMTVVLLIGLNLLVFRTKIGIAMRATAQDKI 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               ++ +        FA+ +     AG         +      F   I   +  +LGG+
Sbjct: 187 MSSLVSISSNRIISLTFAIGAGLAAAAGVMVGLYYGSV-RYDMGFLPGIKAFAAAVLGGI 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +++       I+  V     G     +  +  F             I L  V+  +   
Sbjct: 246 GNITGAMLGGLIIGMVEIFGAGYISGQYKDVFAF-------------IILIAVLYFKPTG 292

Query: 339 LLRL 342
           ++  
Sbjct: 293 IMGE 296


>gi|313903768|ref|ZP_07837157.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Thermaerobacter subterraneus DSM 13965]
 gi|313465956|gb|EFR61481.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Thermaerobacter subterraneus DSM 13965]
          Length = 292

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 97/304 (31%), Gaps = 25/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L L++      + +  +  + +     L +  ++ +
Sbjct: 8   LANALQLGGIYALIALGYTMVYGVLKLINFAHGDIFMVACFIGLFVAVYLKLPLAAVLVL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   +   G+ +   + +   +   ++ +I +      L      T G A          
Sbjct: 68  TMAATALLGVTVERVAYRPLRNAPRMSLVITALGVGLFLENLVRATVGAA---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+    +    +        ++     L A +   + RT +  A R I DN++
Sbjct: 118 -PRNFPALVPATTWNVGGITVSGVQVLIVAVSVLLMALLRYVVMRTMLGKAMRAIADNRE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + FA+ SA     G   A +   I P M             +LGG+
Sbjct: 177 VLGLMGINPDRIITATFAIGSALAAAGGILVAQAYPVIEPYM-GILIGWKAFIAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        +L     L        F   + F               L LV+L+R   
Sbjct: 236 GLIDGAMLGGFLLGLTEVLVAAYLPSTFRDGIAFT-------------ILILVLLVRPTG 282

Query: 339 LLRL 342
           LL  
Sbjct: 283 LLGR 286


>gi|134096410|ref|YP_001101485.1| high-affinity branched-chain amino acid ABC transporter membrane
           protein [Herminiimonas arsenicoxydans]
          Length = 294

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 95/297 (31%), Gaps = 8/297 (2%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           +IY M A G ++  G L ++  +      +GA++  +  S   L + +  P   +++   
Sbjct: 1   MIYAMVAVGFTLFFGVLDVIKFSHGDTLMVGAFA-GLTASTGVLMLDIGSPWIRLLAVVL 59

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
             +     L        +  L  +     +L      T  +  + +            SL
Sbjct: 60  AAVCVTGLLGAAIAKWLVLPLHKAPPLNTLLATLMLGTVMREAVRLFYPDGSNSQPFPSL 119

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
           +                  +LL    + A +   + RT +  A R +  + +    +   
Sbjct: 120 LPTDAIEFGGFALRADNVILLLSGLAIIAGVHFLITRTRLGMAIRAVAQDGETARLMGIN 179

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
                L  FA+ S    +AG       + I+ ++      +I  +  ILGG+ ++     
Sbjct: 180 FEAVVLLTFALGSGMAALAGVMNGLYYNEINFNV-GLLLGVIGFAAAILGGLGNIYGAII 238

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
              +  G+  L          ++       +          + +++  +   L+  +
Sbjct: 239 GGFLFAGLQVLGSATLPALIPNI------PSAYKDVFAFAVVIILMAWKPTGLIAEK 289


>gi|309790092|ref|ZP_07684665.1| inner-membrane translocator [Oscillochloris trichoides DG6]
 gi|308227817|gb|EFO81472.1| inner-membrane translocator [Oscillochloris trichoides DG6]
          Length = 389

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/350 (12%), Positives = 105/350 (30%), Gaps = 24/350 (6%)

Query: 12  DKILCLLAVVYPLLL------FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
             +L L+ VV    L       +        + +    ++  ++   A G ++V G L  
Sbjct: 39  AAVLGLIVVVVAFFLSRSDPKIMQTAIAILPQVMIDGMVRGFLFATIALGYTMVYGVLEF 98

Query: 66  LSLNCVIAYAIGAYSYV-----------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
           ++      + +G +              +    + + I + I +   +SG   M     +
Sbjct: 99  INFAHGEIFMVGGFVGAGVAYLLMQWGLLSTLPWIVFIVIAIVMGMTVSGLLAMATERVA 158

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPIT--NGKAGIYVADRLYFLGTTVRSLIRFFRF 172
            +   +   +  LI +     +L     +   +   G          G   +        
Sbjct: 159 YRPLRNSPRLVPLISAIGMSLVLQDVVRLIATSSPLGFNARFETPNFGKPFQIASIPLGE 218

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
            +  V         ++    +  ++   +  T +  A R +  ++     +   +     
Sbjct: 219 RAIPVQISPKAVIFIVAAMLMLLALNYLVNATRLGKAIRAVAQDRATASLMGINVNQIIS 278

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             F +  A  G AG  F  +   ++P M  F   +   +  +LGG+ +++       +L 
Sbjct: 279 LTFLIGGALGGAAGVLFGMNIGTVNPYM-GFIPGLKAFTAAVLGGIGNITGAMVGGIVLG 337

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +          +         S            L L+++ R   LL  
Sbjct: 338 FLEAFVASYLSLFTGG----AFSGASYADIAAFSILILILIFRPEGLLGE 383


>gi|84496247|ref|ZP_00995101.1| putative branched-chain amino acid transport permease [Janibacter
           sp. HTCC2649]
 gi|84383015|gb|EAP98896.1| putative branched-chain amino acid transport permease [Janibacter
           sp. HTCC2649]
          Length = 289

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 103/310 (33%), Gaps = 26/310 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y          Y + A GL+++ G +G+++ +    Y +GA    +L     +  W  +
Sbjct: 6   QYTLQGLATGGFYALAALGLAVIFGVMGVVNFSHGAMYMLGAVGSAVLLDVADVPFWGAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +  ++    G+++    +++      +   +++     +++       G +G+      
Sbjct: 66  VIIPILLFLFGILVERLLVRWLLGLDPLYNFLLTFGLTLLIVDLVKRRYGVSGLPYELPA 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                         R     +    +  +       L  ++ + L +T I    R   ++
Sbjct: 126 ----------GLEGRVSVGGLSLSSYQLFAAFFSVVLCVAVWMLLTKTRIGMIVRASTED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +   +L   +       F    A  G+AG   A  R          +  II+ ++V++G
Sbjct: 176 AERTRALGINVGRWVTPVFGFGIALAGVAGVLAAPFRAI--TADMGSNFIIILFAVVVIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+     A  ++  V                            L+ + +  V+L+R 
Sbjct: 234 GLGSILGAVVAGFLVGLVEAYGQAYA--------------PSYAQVLIFVLMAAVVLVRP 279

Query: 337 HSLLRLRTPS 346
             L      S
Sbjct: 280 AGLFGREEAS 289


>gi|291279322|ref|YP_003496157.1| branched-chain amino acid ABC transporter permease [Deferribacter
           desulfuricans SSM1]
 gi|290754024|dbj|BAI80401.1| branched-chain amino acid ABC transporter, permease [Deferribacter
           desulfuricans SSM1]
          Length = 287

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 108/306 (35%), Gaps = 25/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I    IQ  IY + A GL++V G L +L +     + +GAY  V+L ++   S+ L   +
Sbjct: 7   ILQGLIQGSIYALIAVGLTLVYGLLRILHVAHAGLFTLGAYLGVLLMNQT-NSLILSFTI 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S  + G  G+ + +   K   +      LI S      + +   +  G  G+   +  + 
Sbjct: 66  SMFLVGLLGVAIYIFCYKPMLEKPPYVALIASIGLFISMEEIYRMVFGAMGVSYKNPPFQ 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                           S +  +      +L    L +++ ++  +T +  +WR      +
Sbjct: 126 DV-----------INLSSLHLKSAEIVTMLVALVLISALSIFTTKTRVGISWRATVTQPQ 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              S    +   +   F + S   G  G       + + P M         ++I++LGG+
Sbjct: 175 IAESFGINVEKVRYGNFFIGSMLAGAGGVMVGILNNLVEPTMGGVPSY-KALAIIVLGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++     A+ +L  V            +               +    L +V++++   
Sbjct: 234 GNVKGTLIASVLLGVVESFGTIYLGSLLD------------RDAIAFAFLIIVLMIKPQG 281

Query: 339 LLRLRT 344
           L   + 
Sbjct: 282 LFGSKR 287


>gi|145301111|ref|YP_001143952.1| ABC-type branched-chain amino acid transporter, permease protein
           [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142853883|gb|ABO92204.1| ABC-type branched-chain amino acid transporter, permease protein
           [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 308

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 86/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +       +
Sbjct: 12  LLNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMVMAGLMMMGIDSTFL 71

Query: 99  SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
               +    +I+                      I     I           +    R  
Sbjct: 72  LLGGAFLVSIIITGTYGWTIERVAYRPLRGGNRLIPLISAIGMSIFLQNMMRMAQGSRDI 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            + T +                      + +       ++  ++ R+ +  A R   ++ 
Sbjct: 132 AMPTLISGGWTLGGEDGFQASLSYMQLIIFVVTFITMLALTQFIGRSRMGRACRACSEDI 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMANLLGIDTHVVISITFVLGATLAAVAGVLLGMYYGVINPY-LGFMAGLKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L  V  L  G     +  ++ F             + L  V+L    
Sbjct: 251 IGSIPGAVLGGLLLGVVEALTAGYLSTEYKDVMAF-------------VLLIGVLLFMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|229514631|ref|ZP_04404092.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           TMA 21]
 gi|229348611|gb|EEO13569.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           TMA 21]
          Length = 333

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 96/312 (30%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 35  LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   ++        + + + +P + +     G I G+   K +        + M+     
Sbjct: 94  LCG-AFAATLVEMEVPVLVAVPTALLAGATLGAISGIIIAKGKVQAFIATLVTMT----- 147

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G   +Y   R    G T  +    +      +   + ++ +++       
Sbjct: 148 -------LLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYALGIPVPVWLMVVVFAGAWY 200

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +      T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 201 LL----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 256

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 257 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 316

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 317 AKAVVILLAVLV 328


>gi|284990186|ref|YP_003408740.1| ABC transporter-like protein [Geodermatophilus obscurus DSM 43160]
 gi|284063431|gb|ADB74369.1| ABC transporter related protein [Geodermatophilus obscurus DSM
           43160]
          Length = 610

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 98/269 (36%), Gaps = 33/269 (12%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS-----IW 93
             +    I +  +FA+    V+   G LSL      ++ A+S   L            + 
Sbjct: 5   YATTLTFIALGAIFAYSFYAVL-IAGQLSLGQAGFASVAAFSAATLAPSGDDVGDVPALL 63

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +   +     +++GLP++  RG +LAIATL  +E  + +L+  +  T G  G    
Sbjct: 64  TAVVIGMAVGAVASVVLGLPTMHLRGVFLAIATLGFAEAVRVVLLNQEW-TGGAQG---- 118

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                                   +  I    +      + A     + R+    A   I
Sbjct: 119 ----------------------LAVPRILTVGMAWTALAVVAYWFWRMGRSRYGRALEAI 156

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R+++ A  S+   +   +L+AF  S A  G+ G  FA     I+P  F F+  +  +   
Sbjct: 157 REDELAARSMGIDVGRHRLAAFVTSGAVAGLYGVLFAYYVRLIAPSDFDFTAAVDGLVTA 216

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMN 302
           ++GG T        +     + E+   + 
Sbjct: 217 VVGGSTMFLGPILGSGFQTMIPEIQRAVG 245


>gi|225685894|ref|YP_002733866.1| inner-membrane translocator [Brucella melitensis ATCC 23457]
 gi|256261890|ref|ZP_05464422.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2
           str. 63/9]
 gi|225641999|gb|ACO01912.1| inner-membrane translocator [Brucella melitensis ATCC 23457]
 gi|263091372|gb|EEZ15908.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2
           str. 63/9]
 gi|326410212|gb|ADZ67276.1| inner-membrane translocator [Brucella melitensis M28]
 gi|326553505|gb|ADZ88144.1| inner-membrane translocator [Brucella melitensis M5-90]
          Length = 406

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/311 (17%), Positives = 106/311 (34%), Gaps = 26/311 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                + + +  IQ+LI  +FA   S++ G  G+LS      + +G+++ V + + +G  
Sbjct: 20  PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHVMNAFGGE 79

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L  P+  +     G++ GL +  F      +   +++     +L    P   G  G  
Sbjct: 80  GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFG-- 137

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                          +YY+ L     S  ++  L  T       
Sbjct: 138 ---------GEAGVSSFRMPAWGFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R+N      L   +       FA+S+ F G+AGA  A + +  +  +F+   +  V+ 
Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
              +GG+ +    A   A +     L   +   +                    + L LV
Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHLTSDVTRSW---------------LLYQGLILVLV 293

Query: 332 ILMRSHSLLRL 342
           ++     L+  
Sbjct: 294 MMFLPRGLVGE 304


>gi|192293244|ref|YP_001993849.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|192286993|gb|ACF03374.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 341

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/337 (15%), Positives = 109/337 (32%), Gaps = 17/337 (5%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSM-GIQILIYVMFAWGLSIVVGSL 63
            L   K D +  LL  +  LL+   +G+  S   +        ++  + A GL++V G +
Sbjct: 14  PLPQAKRDLLPVLLPAILALLMLPLVGSFSSWVTLTVASLAMGMMIFIMASGLTLVFGLM 73

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            +L+       A+GAY   ++      +S    +  +  +     +     S        
Sbjct: 74  DVLNFGHGAFIAVGAYVATLVLLPLAAMSGADSLLTNLAVLVPAVLAAMAVSGALGVVVE 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
            +  L +       ++              A     +            F    +    +
Sbjct: 134 RVLILPVYGQHLKQILMTTGGLIVAEQALYALWGPQIIPLPLPTSLRGSFIIGDIAIAKY 193

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
              V+L    +   I L L RT I    R   +N++   +L   +    L  F V SA  
Sbjct: 194 RLLVMLVGLVVFVGIQLTLNRTKIGLLIRAGVENREMVEALGYHVKRLFLGVFMVGSALA 253

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+ G  +A  R+++          +++  +VI+GG+ S+        ++  V      + 
Sbjct: 254 GLGGVMWALYREQV-HASMGNELTVLIFIVVIIGGLGSVGGCFIGALLVAMVANYGGFL- 311

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
                                 ++ +  +++ R   L
Sbjct: 312 -------------VPKLALVSNILLMVAILMWRPRGL 335


>gi|49083545|gb|AAT51058.1| PA1073 [synthetic construct]
          Length = 308

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 91/305 (29%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I  +   +     +P+
Sbjct: 11  LVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYIAFIAITLLAMMGLDSVPL 70

Query: 99  SAMIS-GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             + +  A  ++                      I     I           +    +  
Sbjct: 71  MMLAAFAASIIVTSAFGYSIERVAYRPLRGGNRLIPLISAIGMSIFLQNAVMLSQDSKEK 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            + T +     F     + V+       + +    +   + L++ R+ +  A R   ++ 
Sbjct: 131 AIPTMLPGNFVFGESSMNGVVISYMQILIFVVTFLVMFGLTLFISRSRLGRACRACAEDL 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +A          I+     F   I   +  +LGG
Sbjct: 191 KMTNLLGINSNNIIALTFVIGAALAAVAAVLLGMQYGVIN-PGIGFLAGIKAFTAAVLGG 249

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L         +    +  ++ F               L LV+L R  
Sbjct: 250 IGSIPGAMLGGLLLGVAEAFGADVFGDQYKDVVAFG-------------LLILVLLFRPT 296

Query: 338 SLLRL 342
            +L  
Sbjct: 297 GILGR 301


>gi|23013284|ref|ZP_00053197.1| COG4177: ABC-type branched-chain amino acid transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 329

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 60/315 (19%), Positives = 115/315 (36%), Gaps = 19/315 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S+ I +L+        ++++G  G  SL   +   +GAY+   L   YG   W+  
Sbjct: 29  DYVLSILITVLLQAYLGMSWNVMMGFAGQFSLGHALYVGLGAYAGGALFVHYGTPPWIGA 88

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                +S A G ++G    +F+   +  A L ++      ++       G +        
Sbjct: 89  FAGMAVSAAVGAVIGTLGFRFKVMGVYFALLTIAFAEFTRVLFDHWGWVGAS-------- 140

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   +                  YYV+LGM   +      L    I   W+ IR++
Sbjct: 141 -SGLFLPPAPNNSPNNLWLLRGSTTMFYYVILGMTAAAFWFCRTLLMRRIGYYWQAIRED 199

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVISIVIL 275
           Q A  +L   +   K+ A  +S+A   + G F A   + + P+  F    +I ++   I+
Sbjct: 200 QDAADALGIDVFKNKMIAVLISAAMTSLGGMFLAFFNNNLYPESIFSMHRSIELMLGTII 259

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ +L        +L  + E           ++L      +        I L L+++++
Sbjct: 260 GGIGTLFGPILGAVVLTALGEGL---------TILGAHIGIDGVKQIAYGICLMLILVLK 310

Query: 336 SHSLLRLRTPSNFLE 350
              L      +  LE
Sbjct: 311 PGGLWPWLRKALRLE 325


>gi|331015726|gb|EGH95782.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 307

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 93/297 (31%), Gaps = 16/297 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91
           + +       Y + A G ++V G +G+++      Y IG+Y   +  +   +        
Sbjct: 11  LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70

Query: 92  -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +      + +++ A G  +   + +   +   +  LI +      L     ++ G    
Sbjct: 71  LMIAGFAAAIVVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNF 130

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            + + L          + F    S  V+       V +        + L++ R+ +  A 
Sbjct: 131 AIPNLL-------PGSLSFGLGGSQEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRAC 183

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F V +A   +A    +     I+     F   +   
Sbjct: 184 RACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVIN-PSAGFLVGLKAF 242

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  +LGG+ S+        +L         +    +  ++ F     +       I 
Sbjct: 243 TAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 299


>gi|313896873|ref|ZP_07830420.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312974320|gb|EFR39788.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 294

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 87/303 (28%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G +++ G + L++      Y +GAY      +     +  ++  
Sbjct: 11  LINGISLGSIYALIALGYTMIYGIIKLINFAHGDIYMVGAYLGFYAVTLGIPVVPAILIS 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+ S     +        R        +    +   +               +   +  
Sbjct: 71  MAVTSLLGIAVERFAYRPLRHAPRISVLITAIGVSFLLE------------YVMMALVSP 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T  + I    +    ++       ++     L   +   +R T I  A R    + +
Sbjct: 119 TPRTFPATISDVSWTFEGLVISGQQLLIMGVTFVLMVILTYIVRATKIGKAMRAASYDTE 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +           FA+ SA   +AG       + I P M      I      + GG+
Sbjct: 179 AAQLMGINADRIISITFAIGSALAAVAGVLIGIYYNSIDPLM-GLMPGIKAFVAAVFGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L        +L  V     G  F  F     F               L LV+L++   
Sbjct: 238 GILPGAVVGGIVLGIVEAFISGFGFSMFRDAAAF-------------AILILVLLLKPAG 284

Query: 339 LLR 341
           +  
Sbjct: 285 IFG 287


>gi|258541262|ref|YP_003186695.1| urea ABC transporter permease [Acetobacter pasteurianus IFO
           3283-01]
 gi|256632340|dbj|BAH98315.1| amide-urea transporter permease protein [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256635397|dbj|BAI01366.1| amide-urea transporter permease protein [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256638452|dbj|BAI04414.1| amide-urea transporter permease protein [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256641506|dbj|BAI07461.1| amide-urea transporter permease protein [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256644561|dbj|BAI10509.1| amide-urea transporter permease protein [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256647616|dbj|BAI13557.1| amide-urea transporter permease protein [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256650669|dbj|BAI16603.1| amide-urea transporter permease protein [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256653660|dbj|BAI19587.1| amide-urea transporter permease protein [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 371

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/348 (14%), Positives = 98/348 (28%), Gaps = 36/348 (10%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L +     + L +       +  ++  + L Y     GL    G  G+LSL   I + +
Sbjct: 10  ILFLSILAAILLIVLPMGLDAFRLNLIGKYLTYAFVTIGLVACWGDSGILSLGQGIFFGL 69

Query: 77  GAYSYVILG------------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           G Y   +                       +                  S       +  
Sbjct: 70  GGYCMAMFLKLQASTLEATKNQSTPGIPDFMDWNQITALPWFWKPFHSLSFSLIAMMVVP 129

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPS 174
           A L +         +            +A  L  L    +                 +  
Sbjct: 130 AVLAVVIGAAMFKRRVGGTYFAIITQAIASVLTILIVGQQGYTGGVNGITDLRTLDGWDI 189

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                +  +YYV + +      ++ ++R++ +    R +RD +         +   K+  
Sbjct: 190 RTDHAKYILYYVGVFLLLACLLLLRFVRKSKLGRILRAMRDQEDRVRFSGYNVANFKIFI 249

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           FA+++A  G+ GA F      +SP       +I ++    +GG  SL      T ++   
Sbjct: 250 FALAAAMAGIGGALFTLEVGFMSPTFVGIVPSIEMVIYCAVGGRNSLVGAVYGTLLVNWA 309

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                            F  SF    T  M      ++L     L  L
Sbjct: 310 RT--------------SFSESFPEIWTFAMGGLFIAIVLFLPGGLASL 343


>gi|297579737|ref|ZP_06941664.1| ribose ABC transporter permease [Vibrio cholerae RC385]
 gi|297535383|gb|EFH74217.1| ribose ABC transporter permease [Vibrio cholerae RC385]
          Length = 333

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 96/312 (30%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 35  LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   ++        + + + +P + +     G I G+   K +        + M+     
Sbjct: 94  LCG-AFAATLVAMEVPVLIAVPTALLAGATLGAISGIIIAKGKVQAFIATLVTMT----- 147

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G   +Y   R    G T  S    +      +   + ++ +++       
Sbjct: 148 -------LLRGVTMVYTDGRPISTGFTDTSDTFAWFGTGYALGIPVPVWLMVVVFTGAWY 200

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +      T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 201 LL----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 256

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 257 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 316

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 317 AKAVVILLAVLV 328


>gi|220923656|ref|YP_002498958.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219948263|gb|ACL58655.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 295

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 90/304 (29%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL-IP 97
           + +  +   ++ + + GL+++ G + +++        +G Y   ++ +  GL  ++  I 
Sbjct: 8   LANGLMLGGLFAIVSVGLTLIFGIVKVVNFAHGEFLMVGMYGTYLVTTGLGLHPFVAVIA 67

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           V  ++     +   L              +  +      LI    +  G           
Sbjct: 68  VVPVLFVLGALTQRLLIQPLMAAGDDHIQIFATVGLSTALINLALLAFGADIANTPPHGL 127

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L                 V   +    +L     L   + L L RT    A R +  N+
Sbjct: 128 RLP-----------IEIGPVRVLLGQVVILAASIALVLGLQLLLSRTQTGRAIRAVAQNR 176

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A   +   +       F + +A +G+A    A            F        +V+LGG
Sbjct: 177 AAAELMGIDVKRIYALTFGIGAACVGVAAVLVAPLYPTSPNSGTYFVL--TAFVVVVLGG 234

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        ++  +  +                   +      +     L++++R  
Sbjct: 235 LGSIGGAFAGALLIGLIDSIAGFYVG-------------SDMREIAVFGVFLLILILRPS 281

Query: 338 SLLR 341
            L  
Sbjct: 282 GLFG 285


>gi|319791506|ref|YP_004153146.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315593969|gb|ADU35035.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 290

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/315 (12%), Positives = 92/315 (29%), Gaps = 26/315 (8%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                     + +      +Y + A GL+++ G L +++     +  +  Y+   L  + 
Sbjct: 1   MFDFGILFPSVLNGLTTGAVYALIALGLTLIYGVLHIINFAHGASLMLALYAVYFLKEKL 60

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           G+  +L +P+  +   A G  +    +   G       L+ +     ++     +     
Sbjct: 61  GIDPYLALPIVVLGMFALGYALQRVVINRSGHGKDENILLATLGIAIVMENLALLFFKSD 120

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                         + +            +  +       G   +S  +   + RT +  
Sbjct: 121 -----------TRNIDTAYSLSTVAIGPAMIAVPKLVAFAGALVVSGILFWIMGRTDLGR 169

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           A R +   ++    +   +      +F +  A +G A  F   +              ++
Sbjct: 170 AIRAVAKEKEGAKLMGIDVDHVYAMSFGIGLACLGAAACFLLPAYYV--NPQVGGGFVLV 227

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
             +IV+LGGM S         ++  V  L           +              +    
Sbjct: 228 AFTIVVLGGMGSFVGALIGGFLVGIVESLGGLYLGESLGQIG-------------IFAIF 274

Query: 329 FLVILMRSHSLLRLR 343
             V+L R   +   +
Sbjct: 275 IGVVLFRPQGMFGAK 289


>gi|17986542|ref|NP_539176.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Brucella melitensis bv. 1 str. 16M]
 gi|17982148|gb|AAL51440.1| high-affinity branched-chain amino acid transport system permease
           protein livh [Brucella melitensis bv. 1 str. 16M]
          Length = 307

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 101/313 (32%), Gaps = 33/313 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89
           + +      IY + A G ++V G +G+++      + +GA+         +  I      
Sbjct: 13  VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 72

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L + L++ V+ +++G     +   + +       +A LI +      L  +  +T G   
Sbjct: 73  LMLLLMMIVAMLLTGLWSWAIERVAYQPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 132

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             V   L                  S     +    V++    L       + RT++  A
Sbjct: 133 KPVPQLLNGSYELF----------GSGGTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 182

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +    +AG  + +    IS     F   +  
Sbjct: 183 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 241

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +  L        +  +  F               L 
Sbjct: 242 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 288

Query: 330 LVILMRSHSLLRL 342
           +V++     +L  
Sbjct: 289 IVLIFMPSGILGR 301


>gi|270292331|ref|ZP_06198542.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus sp. M143]
 gi|270278310|gb|EFA24156.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus sp. M143]
          Length = 292

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 104/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + +  +L + +
Sbjct: 8   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMDFFLALII 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S   +   G+++   + +       IA LI +     +L        G            
Sbjct: 68  SMAGTALLGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+  R+    +        +L     L   + + +++T +  A R +  +  
Sbjct: 118 -TRAFPQAIQTVRYDLGPISLTNVQLMILAVSLLLMILLQVIVQKTKMGKAMRAVSVDSD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 177 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 236 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 282

Query: 339 LLR 341
           +L 
Sbjct: 283 ILG 285


>gi|92117224|ref|YP_576953.1| inner-membrane translocator [Nitrobacter hamburgensis X14]
 gi|91800118|gb|ABE62493.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Nitrobacter hamburgensis X14]
          Length = 323

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 108/286 (37%), Gaps = 14/286 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  +L+   L             +Q L + + A   ++++G  GLLS    +      Y
Sbjct: 21  MIAFILMTALLAIVPMTGIYPFFVMQGLCFALLACAFNLLLGYGGLLSFGHAMFLGTSGY 80

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                   +GL   L I    + +    ++ G+ +++ +G Y A+ TL ++++   I ++
Sbjct: 81  VSAHALKVWGLPPELGIVAGVVAAAVLSVVTGVVAIRRQGIYFAMITLALAQLLYFIYLQ 140

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                                  ++ + +   F    + +   +YYV+LG       +I 
Sbjct: 141 --------------TPFTHGEDGIQGVPQGKMFGVLDLSHPDTLYYVVLGGFLFGFLVIY 186

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
               +      ++IR+N++   SL       KL A+ +S    G AG+         S  
Sbjct: 187 RAINSPFGEVLKSIRENEQRAISLGYKTDQYKLLAYILSGTLAGFAGSLKVLVAQNASLT 246

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
              ++ +  ++ + ++GG+ ++         +I + +   G   + 
Sbjct: 247 DVHWTMSGEIVLMTLVGGLGTVFGPVVGAFAIIAMQQYLAGFGQWV 292


>gi|326316889|ref|YP_004234561.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323373725|gb|ADX45994.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 306

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 92/305 (30%), Gaps = 15/305 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL++V G + +++L     Y +GAY    + +  G     L   +
Sbjct: 11  LNGLQFGLMLFLLAAGLTLVFGIMDMINLAHGSLYMVGAYLIAAIATASGSFWIGLAGGT 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
              +    ++      +          L    I        + +   +            
Sbjct: 71  LATAAIGVLLEVSVLRRLYRRDHLSQVLGTFAILLMANEAVRMVWGSQPVPLNPPPALAG 130

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +               Y  +  +++     ++  + + + RT +    R    N++ 
Sbjct: 131 PVELLP----------GFSYPAYRLFIIGVGLAVALLLYVLVTRTRVGMQVRAGASNREM 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             ++ T +       FA+ +A   +AG                 S  I+   ++++GG+ 
Sbjct: 181 AMAMGTNVRRLFTGIFALGAALCAIAGGMLGPLLAV--QVGMGESILILAFVVIVIGGIG 238

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT---TLMVIALFLVILMRS 336
           S+        ++  V      +       LL    +          L+ + +  V+  + 
Sbjct: 239 SIRGALVGALLVGLVDTAGRTLVPLLAERLLGPAAAAGAGPAVASILIYVLMAAVLFWKP 298

Query: 337 HSLLR 341
             L  
Sbjct: 299 RGLFP 303


>gi|225628839|ref|ZP_03786873.1| high-affinity branched-chain amino acid transport system permease
           protein LIVH / high-affinity branched-chain amino acid
           transport ATP-binding protein LIVG [Brucella ceti str.
           Cudo]
 gi|225616685|gb|EEH13733.1| high-affinity branched-chain amino acid transport system permease
           protein LIVH / high-affinity branched-chain amino acid
           transport ATP-binding protein LIVG [Brucella ceti str.
           Cudo]
          Length = 308

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/294 (11%), Positives = 91/294 (30%), Gaps = 27/294 (9%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107
           + + A GL+++ G + +++         G +   ++ ++ GL  +  + +    +     
Sbjct: 32  FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 91

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +   L            A +  +      +I    +  G                  +  
Sbjct: 92  LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 140

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                    +       ++ LG   L  ++ L+L+ +    A R +  ++ A   +   +
Sbjct: 141 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGRAIRAVAQHRSAAELMGVNV 200

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
               +  F + +A +G+A    A      S     F        +V+LGG+ S+      
Sbjct: 201 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 258

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             I+  +  +                   +     ++     L+++++   L  
Sbjct: 259 ALIIGVIDTMSGYYIG-------------SDLREAVVFGIFLLILILKPSGLFG 299


>gi|146283318|ref|YP_001173471.1| branched-chain amino acid transport protein BraD [Pseudomonas
           stutzeri A1501]
 gi|145571523|gb|ABP80629.1| branched-chain amino acid transport protein BraD [Pseudomonas
           stutzeri A1501]
 gi|327481711|gb|AEA85021.1| branched-chain amino acid transport protein BraD [Pseudomonas
           stutzeri DSM 4166]
          Length = 307

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 86/290 (29%), Gaps = 2/290 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I      +     +P+
Sbjct: 11  LINGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIAIVGLSMMGLDALPI 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
             + +    MI+                   + +   I  I           +    +  
Sbjct: 71  LMIGAFVTAMIVTSAYGYSIERVAYRPLRGSNRLIPLISAIGMSIFLQNVVLLAQDSKDK 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   +   +       + V+       + +        + L++ R+ +  A R   ++ 
Sbjct: 131 AIPNLMPGNLVIGESTMNGVVISYMQILIFVVTFVAMYGLTLFISRSRLGRACRACAEDL 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +A    +     I+P    F   I   +  +LGG
Sbjct: 191 KMANLLGINTNGIIALTFVIGAALAAIAAVLISMQYGVINPH-IGFLAGIKAFTAAVLGG 249

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           + S+        +L         +    +  ++ F     +       I 
Sbjct: 250 IGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFSLLVLVLLFRPTGIL 299


>gi|50955127|ref|YP_062415.1| ABC transporter, ATP-binding protein [Leifsonia xyli subsp. xyli
           str. CTCB07]
 gi|50951609|gb|AAT89310.1| ABC transporter, ATP-binding protein [Leifsonia xyli subsp. xyli
           str. CTCB07]
          Length = 429

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 15/123 (12%)

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                 K+ AFA+ +   G++GA FA     ++   F    +I+ ++ V+LGG  +    
Sbjct: 1   MPTFGYKVWAFAIGAGVGGLSGALFAGQVGFVNNQKFDVQTSILFLAAVVLGGAGNKVGA 60

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
               AI+  +      +  Y                  +  +AL L+++ RS  L   R 
Sbjct: 61  MLGGAIVAYIPLRFTAIADY---------------KYLIFGVALVLIMIFRSQGLFPARQ 105

Query: 345 PSN 347
              
Sbjct: 106 KLL 108


>gi|326385669|ref|ZP_08207299.1| urea ABC transporter, permease protein UrtC [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326209827|gb|EGD60614.1| urea ABC transporter, permease protein UrtC [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 333

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/333 (15%), Positives = 99/333 (29%), Gaps = 28/333 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           L             Y  ++  + L   + A G+ +  G  G+LSL   + + +G Y+  +
Sbjct: 2   LFALAAAIPFGLSDYDTNLVARFLAMGIVALGIVLTWGHGGILSLGQGVFFGLGGYAIAM 61

Query: 84  LGSRYG----LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                          +                 P        +  A +     +     +
Sbjct: 62  HIKLADLAEGEIPDFMQWSGRTALPFWWEPFHSPVFALAAALVGPALVAALFAWAVFHRR 121

Query: 140 WKPITNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                               I     +      + +    F F  +       +Y++ LG
Sbjct: 122 VSGTYFALITQALALAFATLIISRQDVTGGFNGLTNFTSIFGFLFAGPGMASALYWITLG 181

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              LS   + WL  +      R  RD +     L    +  K++AFA+++   G+ GA F
Sbjct: 182 ALALSWLGLRWLLGSRFGTVLRAARDGENRVRFLGYDPVPFKVAAFALAAMLSGLGGALF 241

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +   ISP +   + +I ++  V +GG TSL         +    +             
Sbjct: 242 TLNAGVISPALIGVAPSIEMVVWVAIGGRTSLGGAIFGALAVNLARDAISS--------- 292

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                SF      +M     LV+ +    L  L
Sbjct: 293 -----SFPEGWLYVMGALFILVVTLFPQGLAGL 320


>gi|222479519|ref|YP_002565756.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239]
 gi|222452421|gb|ACM56686.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239]
          Length = 325

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 55/317 (17%), Positives = 106/317 (33%), Gaps = 28/317 (8%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L       T   +Y     +   IY + A GL+++ G + +++        +  Y+ ++ 
Sbjct: 32  LGLSLPSPTIFAQYFVFAVLLGGIYGLIALGLTMIFGVMDVINFAHGALMVVAMYAVLVF 91

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
               GLS +  IP + ++    G+++   ++    D      LI++     ILI    I 
Sbjct: 92  SDATGLSPFFAIPFAVLLLFVFGVVIYRSTIAPIIDAPQENQLIVTFGVLLILISGVEIA 151

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G     +              +       S V       Y L+      +   L+L+RT
Sbjct: 152 FGSDPRQL-------------GLDLGSLEISGVFVPQGQLYALIIALVALSGTWLFLQRT 198

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            +  A R   DN+     +   +       F + +A  G+AGA     +           
Sbjct: 199 MLGRAIRGTADNRDGAQYVGIDVPRIDALTFGIGAALAGLAGAVIPLFQSF--TPALGDQ 256

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
             I    +V+LGG+ S         I+  +                         +  ++
Sbjct: 257 YLINAFVVVVLGGLGSFPGAFVGGLIIGFIQVFGSAYLG-------------GSTYQIVI 303

Query: 325 VIALFLVILMRSHSLLR 341
            +A  LV+L++   LL 
Sbjct: 304 FMAFILVLLVKPEGLLG 320


>gi|120611832|ref|YP_971510.1| inner-membrane translocator [Acidovorax citrulli AAC00-1]
 gi|120590296|gb|ABM33736.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 306

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 92/305 (30%), Gaps = 15/305 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL++V G + +++L     Y +GAY    + +  G     L   +
Sbjct: 11  LNGLQFGLMLFLLAAGLTLVFGIMDMINLAHGSLYMVGAYLIAAIATASGSFWIGLAGGT 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
              +    ++      +          L    I        + +   +            
Sbjct: 71  LATAAIGVLLEVSVLRRLYRRDHLSQVLGTFAILLMANEAVRMVWGSQPVPLNPPPALAG 130

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +               Y  +  +++     ++  + L + RT +    R    N++ 
Sbjct: 131 PVELLPGFH----------YPAYRLFIIGVGLAVALLLYLLVTRTRVGMQVRAGASNREM 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             ++ T +       FA+ +A   +AG                 S  I+   ++++GG+ 
Sbjct: 181 AMAMGTNVRRLFTGIFALGAALCAIAGGMLGPLLAV--QVGMGESILILAFVVIVIGGIG 238

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT---TLMVIALFLVILMRS 336
           S+        ++  V      +       LL    +          L+ + +  V+  + 
Sbjct: 239 SIRGALVGALLVGIVDTAGRTLVPLLAERLLGPAAAAGAGPAVASILIYVLMAAVLFWKP 298

Query: 337 HSLLR 341
             L  
Sbjct: 299 RGLFP 303


>gi|239832870|ref|ZP_04681199.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
 gi|239825137|gb|EEQ96705.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
          Length = 307

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 102/313 (32%), Gaps = 33/313 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89
           + +      IY + A G ++V G +G+++      + +GA+         +  I      
Sbjct: 13  VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDVFMLGAFMALIVFLIITTFIGALPIA 72

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L + L++ V+ +++G     +   + +       +A LI +      L  +  +T G   
Sbjct: 73  LMLLLMMIVAMLLTGLWSWTIERVAYRPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 132

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             V   L        +           V   +    V++    L       + RT++  A
Sbjct: 133 KPVPQLLNGSFNLFGTN----------VTISLKQIVVIVVTAVLLTIFWYIVNRTSLGRA 182

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +    +AG  + +    IS     F   +  
Sbjct: 183 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 241

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +  L        +  +  F               L 
Sbjct: 242 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 288

Query: 330 LVILMRSHSLLRL 342
           +V++     +L  
Sbjct: 289 IVLIFMPSGILGR 301


>gi|239813802|ref|YP_002942712.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239800379|gb|ACS17446.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 290

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 92/307 (29%), Gaps = 26/307 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             I +      +Y + A GL+++ G L +++        +  Y+   L  R+G+  ++ +
Sbjct: 9   PSILNGLTTGAVYALIALGLTLIYGVLHIINFAHGACLMLALYAVYFLKERWGIDPYMAL 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++     A G  +    +   G       L+ +     ++     +             
Sbjct: 69  PIAVAGMFALGYALQRIVINRAGHGKDENILLATLGIAIVMENLALLFFKSDTRS----- 123

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + +            +  +       G   +S  +   + RT +  A R +   
Sbjct: 124 ------IDTAYSLSTVAIGPAMIAVPKLVAFAGALVVSGILFWIMGRTDLGRAIRAVAKE 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++    +   +      +F +  A +G A  F   +              ++  +IV+LG
Sbjct: 178 KEGAKLMGIDVDHVYAMSFGIGLACLGAAACFLLPAYYV--NPQVGGGFVLVAFTIVVLG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM S         ++  V  L           +              +      V+L R 
Sbjct: 236 GMGSFVGALIGGLLVGVVESLGGLYLGESLGQIG-------------IFAIFIGVVLFRP 282

Query: 337 HSLLRLR 343
             +   R
Sbjct: 283 QGMFGAR 289


>gi|148558388|ref|YP_001257625.1| branched-chain amino acid ABC transporter permease [Brucella ovis
           ATCC 25840]
 gi|148369673|gb|ABQ62545.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ovis ATCC 25840]
          Length = 328

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/327 (14%), Positives = 114/327 (34%), Gaps = 27/327 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
              +    ++   +          ++  +I+   +    L +V G  G+ +L     +  
Sbjct: 16  AGLIGIVAIIAASVVGWFLFPDNLALLTRIIAIALLVLSLDLVTGYCGIATLGHAALFGA 75

Query: 77  GAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GAY   I  + +      L+  +  +     G++ G   L+  G    + ++ +  +F  
Sbjct: 76  GAYGAGIAAAHFGVTDPILMTVIGLLAGAVTGLVSGAVILRATGLAQLVLSIAVVHLFHE 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
              K    T G  G+         G               F +Y   +Y   + +  +S 
Sbjct: 136 AANKASGWTGGSDGLSGISPDPIFGI------------FEFDLYGRTVYIYAVILLLISF 183

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             + ++  +      R ++++     ++  ++  A+L  + +S A  G+ GA  A S   
Sbjct: 184 IFLRYVVCSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISGAVAGIGGALNAISTQV 243

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +  D   F+ +   + +++LGG  SL      T + +   ++    N +++         
Sbjct: 244 VGLDSLSFTMSAEALVMLVLGGAGSLFGGLVGTVVFMWFEDVVSTANPFHW--------- 294

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                 T++   L  V+L     L   
Sbjct: 295 -----LTMVGALLIAVVLFAPRGLYGT 316


>gi|121608954|ref|YP_996761.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121553594|gb|ABM57743.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 306

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 109/309 (35%), Gaps = 15/309 (4%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
            + +     L+  + A GL++V G + +++L     Y  GAY      S    S W  + 
Sbjct: 9   NLLNGLQFGLMLFLLAAGLTLVFGIMDVVNLAHGSLYMAGAYFAATFTS-LCGSFWAGLL 67

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           +S   + A G+++ +   +       ++ L+ +     I  +   +  G   + +     
Sbjct: 68  LSVAATAAVGVLLEMAVFRRLYQRSHLSQLLATFALILIFNELARMIWGAQALTLNTPPV 127

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
           F                    Y  F  +++     ++A + L + +T +    R    ++
Sbjct: 128 FSRPVE---------LLPGFSYSSFRLFIIGTGLAVAALMYLIVVKTRLGMLVRAGASDR 178

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +   ++   I       FA  +A   +AG    A  +         S  I+   ++++GG
Sbjct: 179 EMAITMGIDIARVFTLLFAFGAALCALAGTLLGAILEV--QVGMGESILILAFVVIVIGG 236

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILM 334
           + S+        ++  V  L   +      +++  + +        + L+ + +  V+  
Sbjct: 237 VGSIRGALVGALLVGMVDTLSRSLLPAALRAIMAPEAAAGVGPSLASILIYVLMAAVLFF 296

Query: 335 RSHSLLRLR 343
           +   L   R
Sbjct: 297 KPRGLFPAR 305


>gi|190893151|ref|YP_001979693.1| amino acid ABC transporter permease [Rhizobium etli CIAT 652]
 gi|190698430|gb|ACE92515.1| amino acid ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 300

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 93/304 (30%), Gaps = 17/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G +G+++      + +G ++ +I+          L   
Sbjct: 8   LFNGLTLGSIYGLVAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLVLTSIFAGLPVA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +++     ++      +  + +A   L  S     ++            I V      
Sbjct: 68  ILLLAMLVVAMLMTSLWNWTIERVAYRPLRGSFRLAPLITAIGMSIVLSNFIQVTQGPRN 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +    +    +   +    +++    L       +  TA+  A R    ++K
Sbjct: 128 KPI---PPMVSSVYQFGNISVSLKQIIIIVITAVLLTIFWYIVNHTALGRAQRATEQDRK 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       F + +A   +AG  +       S     F+  +   +  +LGG+
Sbjct: 185 MAALLGVNVDQTISITFVMGAALAAVAGTMYLMYYGVASF-ADGFTPGVKAFTAAVLGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        ++  +  L        +  +  F               L  V++ +   
Sbjct: 244 GSLPGAVLGGLMIGLIESLWSAYFTIAYKDVATF-------------AILAFVLIFKPTG 290

Query: 339 LLRL 342
           +L  
Sbjct: 291 ILGR 294


>gi|148997174|ref|ZP_01824828.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP11-BS70]
 gi|149007629|ref|ZP_01831246.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP18-BS74]
 gi|149020391|ref|ZP_01835283.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP23-BS72]
 gi|303260014|ref|ZP_07345988.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae SP-BS293]
 gi|303261420|ref|ZP_07347368.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae SP14-BS292]
 gi|303264087|ref|ZP_07350008.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae BS397]
 gi|303266300|ref|ZP_07352191.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae BS457]
 gi|303269541|ref|ZP_07355305.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae BS458]
 gi|307067353|ref|YP_003876319.1| branched-chain amino acid ABC transporter permease [Streptococcus
           pneumoniae AP200]
 gi|307127699|ref|YP_003879730.1| branched-chain amino acid ABC transporter permease [Streptococcus
           pneumoniae 670-6B]
 gi|147756874|gb|EDK63914.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP11-BS70]
 gi|147760784|gb|EDK67755.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP18-BS74]
 gi|147930693|gb|EDK81675.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP23-BS72]
 gi|302637554|gb|EFL68041.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae SP14-BS292]
 gi|302638933|gb|EFL69394.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae SP-BS293]
 gi|302640926|gb|EFL71309.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae BS458]
 gi|302644230|gb|EFL74486.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae BS457]
 gi|302646492|gb|EFL76718.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae BS397]
 gi|306408890|gb|ADM84317.1| Branched-chain amino acid ABC-type transport system, permease
           component [Streptococcus pneumoniae AP200]
 gi|306484761|gb|ADM91630.1| branched-chain amino acid ABC transporter permease [Streptococcus
           pneumoniae 670-6B]
 gi|332077166|gb|EGI87628.1| branched-chain amino acid transport system / permease component
           family protein [Streptococcus pneumoniae GA17545]
 gi|332202614|gb|EGJ16683.1| branched-chain amino acid transport system / permease component
           family protein [Streptococcus pneumoniae GA41317]
          Length = 289

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 107/303 (35%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + ++ ++ + V
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++   G+++   + +       IA LI +     +L        G            
Sbjct: 65  AMLVTAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+  R+    +        +L     L   + + +++T +  A R +  +  
Sbjct: 115 -TRAFPQAIQTVRYDLGPISLTNVQLMILAISLILMILLQVIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|85715591|ref|ZP_01046571.1| Branched-chain amino acid ABC-type transport system permease
           component [Nitrobacter sp. Nb-311A]
 gi|85697530|gb|EAQ35407.1| Branched-chain amino acid ABC-type transport system permease
           component [Nitrobacter sp. Nb-311A]
          Length = 304

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 100/312 (32%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91
           + +  +   IY + A G ++V G +G+++      + IG +  +I               
Sbjct: 8   LINGVVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALITFLILVSMGLSAVPL 67

Query: 92  -IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + +++ VS  ++   G ++   + +       +A L+ +     +L+ +  ++ G    
Sbjct: 68  ILLVMLIVSMAVTAVYGWVVERIAYRPLRQSFRLAPLLSAIGMSFVLMNFSQVSQGAQVK 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +   +    T   S     +  +  ++  +    +L       A     + RT      
Sbjct: 128 PIPPLITGGYTLRDSGNFAVQLSNVQIVVMVTTIVLL-------AIFSYIVSRTRFGRDM 180

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    +Q     L   +       F + ++   +AG  +      +   M  F   I   
Sbjct: 181 RACEQDQTMAALLGVNVDRTISMTFVIGASLAAVAGMMYLLYYGLVDFFM-GFVAGIKAF 239

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ SL         +  +           +  +  F               L +
Sbjct: 240 TAAVLGGIGSLPGAMLGGLAIGLIETFWSAYFSIEYKDVAAFS-------------ILIV 286

Query: 331 VILMRSHSLLRL 342
           V++     LL  
Sbjct: 287 VLIFMPTGLLGR 298


>gi|315186615|gb|EFU20374.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Spirochaeta thermophila DSM 6578]
          Length = 299

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 92/302 (30%), Gaps = 21/302 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      IY + A G +++ G + L++        +G +              L + ++
Sbjct: 12  VNGIALGGIYALIAIGYTMIYGIIKLINFAHGDILMLGTFM-AYFVLMATGPTPLGLVLA 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++     I+G+   +F    L  A  I      N LI    ++     +         
Sbjct: 71  FLVAMPGSAILGMIIERFAYKPLRNAPRI------NALITAIGVSLFLENLARVLPFIGP 124

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                            V        +++    L   +   + RT +  A R +  ++ A
Sbjct: 125 NPRQFPTPPSVFLSYGGVGISNIQLLIIVVSVVLMLVLSYIVERTKVGKAMRAVSYDKPA 184

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +       FA+ SA    AG  FA++   I P M      +      +LGG+ 
Sbjct: 185 SALMGIDVNRVISFTFALGSALAAAAGILFASAYPLIEPYM-GIMPGLKAFVAAVLGGIG 243

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        I+        G         + F               L L++L++   L
Sbjct: 244 SIPGAMVGGFIMGLAETYTKGFINSQLADAIAFG-------------ILILILLVKPSGL 290

Query: 340 LR 341
             
Sbjct: 291 FG 292


>gi|168334625|ref|ZP_02692774.1| ABC transporter (permease) [Epulopiscium sp. 'N.t. morphotype B']
          Length = 300

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 88/309 (28%), Gaps = 17/309 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             + +      I ++ + GLSI  G + ++++       IGAY+  ++   +   +    
Sbjct: 6   NTLFNGLSLTSIILLASLGLSITFGLMRVINMAHGEFIMIGAYATYVVQMVFAAVVPEQF 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                +       +   ++    + L I+ L   EI   +      +      +  +   
Sbjct: 66  QSWYYVVAIPIAFLAAFAIGSLLEKLVISRLYGREIDSLLATFGVSLIL--QQLARSIFG 123

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                       F       +       +++  +          + R+      R +  N
Sbjct: 124 AQGVNVKAPEFLFGGISIGGITLSYNRLFIIFSVVMCIVLTWYIMYRSGFGKQMRAVMQN 183

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +     +           FA+ S   G+AG   +             +  +    +V+LG
Sbjct: 184 RGMAQCMGINSRRVDNLTFAIGSGIAGIAGCSISLLGSV--DSTVGQNYIVYAFMVVVLG 241

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +L       AI+                               +++  + + +  R 
Sbjct: 242 GVGNLKGSVIGAAIIGFASIFAENYTSATMAKA-------------IVLFIVIIFLQKRP 288

Query: 337 HSLLRLRTP 345
             L  +R+ 
Sbjct: 289 QGLFVVRSR 297


>gi|319652360|ref|ZP_08006477.1| hypothetical protein HMPREF1013_03090 [Bacillus sp. 2_A_57_CT2]
 gi|317396021|gb|EFV76742.1| hypothetical protein HMPREF1013_03090 [Bacillus sp. 2_A_57_CT2]
          Length = 332

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 60/324 (18%), Positives = 123/324 (37%), Gaps = 31/324 (9%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  LL  L        +    +  QI I+ +FA    I++G  G++S    + + IGAYS
Sbjct: 14  LAILLFLLLFPFVNDSRSTLILLAQIFIFAIFAMSFDILLGYTGIVSFGHCMFFGIGAYS 73

Query: 81  YVILGSRYG---LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             ++ ++      +  + + +  ++S     I+GL SL+ +  + A+ TL +S++F  + 
Sbjct: 74  TALIFNKLDATLPNFLIGLVIGILLSALVSYIIGLLSLRLKSHFYAMLTLAVSQLFLVLA 133

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            KW+ +T G  G   +    F   T                     YY+ L        +
Sbjct: 134 EKWRGLTQGGDGFTFSVPDVFKDRT-------------------SFYYITLFSVAAVFIL 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +     ++     + I  N+    +L    +  KL A   +      +GA +A S   I+
Sbjct: 175 LKLFTESSTGKVLKAISQNEYRAEALGYKTLHYKLIASVTAGVAASFSGALYAVSLRFIN 234

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            ++F     +  + + ++GG+ +L+       I+  +      +   Y            
Sbjct: 235 TNVFSIEVTLDALLMTMIGGLGTLAGAIAGAGIIEFLRHYLSELAMTY---------PIF 285

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
            R T ++     +V+L     L  
Sbjct: 286 ERWTIILGFLYIVVLLGFPSGLAG 309


>gi|289168247|ref|YP_003446516.1| ABC transporter membrane-spanning permease-branched chain amino
           acid transport [Streptococcus mitis B6]
 gi|307702039|ref|ZP_07639047.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus mitis NCTC 12261]
 gi|307705246|ref|ZP_07642113.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Streptococcus mitis SK597]
 gi|307706959|ref|ZP_07643758.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Streptococcus mitis SK321]
 gi|307708903|ref|ZP_07645363.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Streptococcus mitis SK564]
 gi|288907814|emb|CBJ22654.1| ABC transporter membrane-spanning permease-branched chain amino
           acid transport [Streptococcus mitis B6]
 gi|307616684|gb|EFN95873.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus mitis NCTC 12261]
 gi|307617673|gb|EFN96841.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Streptococcus mitis SK321]
 gi|307620239|gb|EFN99355.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Streptococcus mitis SK564]
 gi|307621195|gb|EFO00265.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Streptococcus mitis SK597]
          Length = 289

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 106/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + ++ ++ + V
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +       IA LI +     +L        G            
Sbjct: 65  AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+  R+    V        +L     L   + + +++T +  A R +  +  
Sbjct: 115 -TRAFPQAIQTVRYDLGPVSLTNVQLMILAISLILMILLQVIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|308450153|ref|XP_003088198.1| hypothetical protein CRE_05354 [Caenorhabditis remanei]
 gi|308248841|gb|EFO92793.1| hypothetical protein CRE_05354 [Caenorhabditis remanei]
          Length = 356

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/344 (13%), Positives = 103/344 (29%), Gaps = 27/344 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             ++ ++    +     A     Y  ++  +I+   + A  L +V G  G+LSL   + +
Sbjct: 21  FAVMLILPWFHVLPQDSALHLSAYWVTLIGKIMCLALVALALDLVWGYAGILSLGHGLYF 80

Query: 75  AIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           A+G Y++ +                   W  +P   + +      + L  L         
Sbjct: 81  ALGGYAFGMYLMRESAGEQLPDFMRFLSWTELPWYWVGTQHFLWALALVILVPGVIAFIF 140

Query: 125 ATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                    +     +I            +  +  +                 +      
Sbjct: 141 GFFAFRSKIKGVYFSIITQAMTFAAALLFFRNETGFGGNNGFTGFKTILGMDITSASMRA 200

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            + ++   +  LS   +  L           IRD++     L    ++ KLSA+ +S+  
Sbjct: 201 TLCFLTALVLLLSFIGLRSLMNKPYGRVLGAIRDSENRLQYLGYRTLWYKLSAWVLSAVI 260

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AGA +      I+P       +I +   V  GG  +L        ++ GV       
Sbjct: 261 AGIAGALYVPQAGIINPSEMNPVNSIEMAVWVAAGGRGTLIGPILGAGLINGVKTY---- 316

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                     F  ++      ++     +V +     ++ L   
Sbjct: 317 ----------FTVAYPEIWLLILGALFIVVTIFLPKGVIGLLER 350


>gi|300313285|ref|YP_003777377.1| branched-chain amino acid ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300076070|gb|ADJ65469.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 338

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 54/313 (17%), Positives = 114/313 (36%), Gaps = 12/313 (3%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L   L + A         +  QI+I  +FA  L +++G  G++SL     + +GAY
Sbjct: 28  LLEILFWLLPVAAYFIFPDYLVLISQIMIVGLFAVSLDLILGYAGIVSLGHAAFFGLGAY 87

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  +L           + ++A+++   G ++    ++       + TL +  +      K
Sbjct: 88  TAGLLAVHGWGEPITGLLLAAVVAAIAGFLVSFLVVRGADLTRLMVTLGIGLMLFEAANK 147

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              IT G  G+         G               F +     Y     +  L   I+ 
Sbjct: 148 AAFITGGVDGLSGMVMGKIFGV------------FEFDLNGRVAYGYSFAVLLLLFVILR 195

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  +      R IR+  +   ++   +    +  F V++A  G+AGA  A +   +  D
Sbjct: 196 RLVNSPFGLGLRGIREGGRRMPAIGADVNRRLVVIFTVAAAVAGVAGALLAQTTQFVGLD 255

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +  F  +  ++ I++LGG   L        + +   +   G+N  Y+   +       + 
Sbjct: 256 VLGFPRSAELLIILVLGGTGRLYGGLVGALVYMLAQDYLSGLNPAYWQFWIGLLLIVIVL 315

Query: 320 HTTLMVIALFLVI 332
                ++    V+
Sbjct: 316 FARGGLLGGLAVL 328


>gi|251781858|ref|YP_002996160.1| putative branched chain amino acid ABC transporter permease
           [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
 gi|242390487|dbj|BAH80946.1| putative branched chain amino acid ABC transporter, permease
           protein [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
          Length = 289

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 106/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L +   L+ +L + +
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDLYMMGAFIGYYLINALQLNFFLALIL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +       IA LI +     +L        G         L  
Sbjct: 65  TMVFTACLGVLIEFLAYRPLRQSTRIAALITAIGVSFLLEYGMVYFVGAEARAFPQALKV 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +                 +        +LL    L  ++   +++T +  A R +  +  
Sbjct: 125 VKYH-----------LGPISVTNVQLIILLVSLTLMLALQFIVKQTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG       + I+P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNSTISFTFALGSALAGAAGVLIGLYYNSINPLM-GMTPGLKAFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    I+  +                      +     ++ + L +++L+R   
Sbjct: 233 GIIPGAAFGGFIIGLLET-------------FSTAIGLSSYRDAVVYVVLIMILLVRPAG 279

Query: 339 LLR 341
           LLR
Sbjct: 280 LLR 282


>gi|115351348|ref|YP_773187.1| inner-membrane translocator [Burkholderia ambifaria AMMD]
 gi|115281336|gb|ABI86853.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia ambifaria AMMD]
          Length = 408

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 56/298 (18%), Positives = 101/298 (33%), Gaps = 12/298 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L  V                 +     Q    V+ A   ++ +G+ GLLS       
Sbjct: 7   AGALRWVLFAACVALPAWLWPHGAVLGYLTQTAALVVLALSYNLQLGTTGLLSFGHAAFA 66

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GA++     +R G  + LL  V  +     G I GL + +  G   A+ TL ++E   
Sbjct: 67  GLGAFAAAHWFNRVGGPLPLLPLVGGVAGAGFGFIAGLLATRRAGTVFAMITLGLAECVA 126

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                      G  G+ +                   +           Y V+   C +S
Sbjct: 127 AAAWSVPAWFGGLGGVPI------------DRASGTPWGGWQFGAPAQAYAVIAAWCIVS 174

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +  L RT ++     +RDN     +L T     +L+    +S F G+AG       +
Sbjct: 175 ALAMRALTRTPLARLANAVRDNPARVAALGTEPRRVRLAMVTCASFFAGIAGTLTLIDVE 234

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
             +PD    + +  V+   ++GG  +    A    +L  +  +  G++  +   L   
Sbjct: 235 IATPDSLSMARSATVLIAAVIGGTGTFFGPAAGAVVLTALSVVVAGVSRAWALYLGVL 292


>gi|329911400|ref|ZP_08275504.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Oxalobacteraceae bacterium IMCC9480]
 gi|327545925|gb|EGF31025.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Oxalobacteraceae bacterium IMCC9480]
          Length = 309

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 99/305 (32%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G ++V G L L++        IGA + V +          L  V
Sbjct: 8   IINGLVLGSMYALIALGYTMVYGVLNLINFAHGDVLMIGAMAGVTILKIVQTVAPDLPGV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++    G I    ++    + +A   L  +     ++         +    +      
Sbjct: 68  VKILIAIGGAIPICVAVNLLIERVAYPRLRNAPRLAPLITAIGVSILLQTFAMMIWGRS- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I    +     +       +L+        ++L + +T +  A R   +N +
Sbjct: 127 -PVAFPQVISAESYHILGALISPTQVMLLVLAGISMFGLVLLVEKTKMGRAMRATAENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        +  FA+ +A   +AG  + A+       M  F   +   S  +LGG+
Sbjct: 186 VAGLMGVDSNAVIVMTFAIGAALAAVAGVMWGATYASAQFAM-GFVPGLKAFSAAVLGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L  +  L  G         L      +        + L +V+ +R   
Sbjct: 245 GNIYGAMLGGILLGLIESLGAGYIGDLTGGFLG-----SHYQDIFAFVVLIIVLTLRPSG 299

Query: 339 LLRLR 343
           ++  R
Sbjct: 300 IMGER 304


>gi|51892753|ref|YP_075444.1| branched-chain amino acid ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
 gi|51856442|dbj|BAD40600.1| branched-chain amino acid ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
          Length = 296

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 94/288 (32%), Gaps = 8/288 (2%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +Y + A G ++V G + L++      + +GA+      + +GL   + + VS
Sbjct: 9   LNGLQLGFVYALIAVGYTMVYGIIKLINFAHGDVFMVGAFLAYFGFTSWGLPWPVAVLVS 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                  G+ +   + +      A     +       L              +       
Sbjct: 69  MAGCAVLGVGIERLAYRPLRARGAPRIAALITAIGVSLFIEYF-------TSLNFVFGSD 121

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              V  ++   R+    +        VL+ +  L AS+   + RT +  A R +  +  A
Sbjct: 122 YRNVPRVLPDRRWELGGITVTNVQLLVLVTVLVLVASLQFVVYRTRVGKAMRAVAQDTDA 181

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +       FA+ SA    AGA FA +  +I P M      +   +  +LGG+ 
Sbjct: 182 ARLMGIDVDRIIACTFALGSALAAAAGALFAVAYPQIHPFM-GIMPGLKAFTAAVLGGIG 240

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           S+        ++  V  L        F   + F     +       + 
Sbjct: 241 SIPGALLGALVMGQVEVLTAAYVTTDFRDAIAFALLILVLLLRPTGLL 288


>gi|307719582|ref|YP_003875114.1| hypothetical protein STHERM_c19060 [Spirochaeta thermophila DSM
           6192]
 gi|306533307|gb|ADN02841.1| hypothetical protein STHERM_c19060 [Spirochaeta thermophila DSM
           6192]
          Length = 299

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 92/302 (30%), Gaps = 21/302 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      IY + A G +++ G + L++        +G +              L + ++
Sbjct: 12  VNGIALGGIYALIAIGYTMIYGIIKLINFAHGDILMLGTFM-AYFVLMVTGPTPLGLVLA 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++     I+G+   +F    L  A  I      N LI    ++     +         
Sbjct: 71  FLVAMPGSAILGMIIERFAYKPLRNAPRI------NALITAIGVSLFLENLARVLPFIGP 124

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                            V        +++    L   +   + RT +  A R +  ++ A
Sbjct: 125 NPRQFPTPPSVFLSYGGVGISNIQLLIIVVSVVLMLVLSYIVERTKVGKAMRAVSYDKPA 184

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +       FA+ SA    AG  FA++   I P M      +      +LGG+ 
Sbjct: 185 SALMGIDVNRVISFTFALGSALAAAAGILFASAYPLIEPYM-GIMPGLKAFVAAVLGGIG 243

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        I+        G         + F               L L++L++   L
Sbjct: 244 SIPGAMVGGFIMGLAETYTKGFINSQLADAIAFG-------------ILILILLVKPSGL 290

Query: 340 LR 341
             
Sbjct: 291 FG 292


>gi|148657085|ref|YP_001277290.1| inner-membrane translocator [Roseiflexus sp. RS-1]
 gi|148569195|gb|ABQ91340.1| inner-membrane translocator [Roseiflexus sp. RS-1]
          Length = 393

 Score = 74.9 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/318 (12%), Positives = 99/318 (31%), Gaps = 19/318 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-----------ILGSR 87
           +    ++  +Y   A G ++V G L  ++      + +GA+              +    
Sbjct: 75  MIDGLVRGFLYATIALGYTMVYGVLEFINFAHGEIFMVGAFVGAFFSAALASSGMLTTLS 134

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL---IKWKPIT 144
             L +   + +   +SG   M +   + +   +   +  LI +     +L   ++   + 
Sbjct: 135 PILFVIAAVLLGMAVSGVLAMSIERVAYRPLRNAPRLVPLISAIGVSLVLQDVMRMIAVN 194

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G                V + +      +  V  +      ++    +   +   +  T
Sbjct: 195 TGLGFNAQFRTPDLGQPLVLAQMPIADERTIPVSIDSRSLIFIVVAILMLIGLNYLVNIT 254

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            +  A R +  ++ A   +   +       F +  A  G AG  F      I+P +  F 
Sbjct: 255 KLGKAIRAVAQDRAAASLMGIDVNRVIAITFLIGGALGGAAGILFGMRVGTINPYV-GFL 313

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
             +   +  +LGG+ +++       +L  +          +         S       + 
Sbjct: 314 PGLKAFTAAVLGGIGNITGAMVGGIVLGFLEAFVASYLSLFTRG----QFSGASYADIVA 369

Query: 325 VIALFLVILMRSHSLLRL 342
              L L+++ R   LL  
Sbjct: 370 FSILILILIFRPSGLLGE 387


>gi|332297726|ref|YP_004439648.1| ABC-type transporter, integral membrane subunit [Treponema
           brennaborense DSM 12168]
 gi|332180829|gb|AEE16517.1| ABC-type transporter, integral membrane subunit [Treponema
           brennaborense DSM 12168]
          Length = 566

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/337 (12%), Positives = 89/337 (26%), Gaps = 19/337 (5%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           MS F L    Y  IL    V   L      G   S   I ++  Q    + +A G++ ++
Sbjct: 225 MSKFFLDNGLYLAILVFFIVCIVLAPLSGNGNLLSLPNIFTILEQSSTRMFYALGVAGLI 284

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGL---------SIWLLIPVSAMISGACGMIMG 111
              G   L+     A+GA    ++                 ++ IP++  +  A  + + 
Sbjct: 285 LLAG-TDLSVGRMVALGAVVTGLILHPGMNIVTFFNMGPWNFVAIPMAVRVLMALSISVV 343

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           L  L      +  A L +      +  +         G             ++ +     
Sbjct: 344 LCVLFSSFAGVFSARLKIHPFISTLATQLIIYGLLFFGTSGTPVGSI-DAGIKDVFGGRW 402

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                    I    +++              +T        +  N +A      ++    
Sbjct: 403 IMGVLNGELITFPKLIIPAVIAIIVAWFIWNKTTFGKNMYAVGGNSEAASVSGISVFKVT 462

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIA 285
           +  F ++  F G    F A   +            +  I+  ++      GG+  +    
Sbjct: 463 MGVFIMAGIFYGFGAFFEAFKANA--SAGTGQGYELDAIAACVVGGISFNGGIGKIGGAV 520

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
               I  G+      +        +            
Sbjct: 521 LGVIIFTGLTYCLTFLGIDTNLQFVFKGFIIIAAVAL 557


>gi|262198564|ref|YP_003269773.1| inner-membrane translocator [Haliangium ochraceum DSM 14365]
 gi|262081911|gb|ACY17880.1| inner-membrane translocator [Haliangium ochraceum DSM 14365]
          Length = 304

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/311 (17%), Positives = 100/311 (32%), Gaps = 29/311 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG--------SRYGL 90
           + +      IY + A G ++V G +G+++      + +GA+  +I          S   L
Sbjct: 8   LINGITLGAIYGLIAIGYTLVYGIIGMINFAHGEIFMLGAFIGLISFLLLGLAGLSWAPL 67

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           ++ L + +S +++ A G  +   + +       +A LI +      L  +  +  G    
Sbjct: 68  ALLLALLLSMVLTSAYGWAVERVAYRPLRGSHRLAPLISAIGMSIFLQNYVQVFQGARVR 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +          +   I  F      V        +++    L  +  L + RT    A 
Sbjct: 128 PLPP-------VIEGSIELFEQGGFTVSLSYVQILIIVVTVTLMTAFALLISRTPFGRAQ 180

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    +Q     L   +       F   +A   +AG  F      I      F   I   
Sbjct: 181 RACEQDQTMAALLGIDVDRTVSLTFVSGAALAAVAGVMFLIYYGVIDFF-IGFLAGIKAF 239

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ SL        ++  +           +  +  F               L L
Sbjct: 240 TAAVLGGIGSLPGAMLGGLLIGLIETFWSAYFTIEYKDVAAFS-------------ILVL 286

Query: 331 VILMRSHSLLR 341
           V+L R   LL 
Sbjct: 287 VLLFRPTGLLG 297


>gi|301632824|ref|XP_002945480.1| PREDICTED: hypothetical protein LOC100493209 [Xenopus (Silurana)
           tropicalis]
          Length = 622

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 97/318 (30%), Gaps = 23/318 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K    LC    +   +  L      S      +  Q+++  + A G ++V+ + G + L+
Sbjct: 316 KTGTTLCWALAIACAVFGLSTDNFFSGSNFALILQQVMVVGVIAIGQTLVILTAG-IDLS 374

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
           C +A A+G+         YGL   L I      +   G++ GL   +       +     
Sbjct: 375 CGMAMALGSIVMTKFAVAYGLHPLLAIACGIGATALMGLVNGLLVTRIXLPPFIVTLGTY 434

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +  F    +                      T             +F +    + Y +L 
Sbjct: 435 NVAFAVTQLY-----------------SQSQTITDVPDAMTWLGGTFSLGGTPIAYGVLL 477

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           M  L  +   WLR  A       + +  +A   L+       L  + ++  F G+A    
Sbjct: 478 MLLLYLATWYWLRDNASGRHVYAVGNKPEATRLLSIASDRVLLGVYVLAGVFYGLAALLT 537

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            A  +   P+  +      + ++V+      GG   +        ++  +      M   
Sbjct: 538 VARTNVGDPNAGQTENLDAITAVVLGGTSLFGGRGMVLGSLAGAIVVGVLRNGLTLMGVS 597

Query: 305 YFNSLLKFDCSFNMRHTT 322
               +L       +  T 
Sbjct: 598 SVYQVLITGILVILAVTV 615


>gi|161619713|ref|YP_001593600.1| hypothetical protein BCAN_A1829 [Brucella canis ATCC 23365]
 gi|260568864|ref|ZP_05839332.1| high-affinity branched-chain amino acid transport system permease
           LIVH [Brucella suis bv. 4 str. 40]
 gi|161336524|gb|ABX62829.1| Hypothetical protein BCAN_A1829 [Brucella canis ATCC 23365]
 gi|260154248|gb|EEW89330.1| high-affinity branched-chain amino acid transport system permease
           LIVH [Brucella suis bv. 4 str. 40]
          Length = 307

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 103/313 (32%), Gaps = 33/313 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL---------GSRYG 89
           + +      IY + A G ++V G +G+++      + +GA+  +I+              
Sbjct: 13  VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFTGMLPVA 72

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L + L++ V+ +++G     +   + +       +A LI +      L  +  +T G   
Sbjct: 73  LMLLLMMIVAMLLTGLWSWAIERVAYRPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 132

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             V   L                  S V   +    V++    L       + RT++  A
Sbjct: 133 KPVPQLLNGSYELF----------GSGVTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 182

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +    +AG  + +    IS     F   +  
Sbjct: 183 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 241

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +  L        +  +  F               L 
Sbjct: 242 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 288

Query: 330 LVILMRSHSLLRL 342
           +V++     +L  
Sbjct: 289 IVLIFMPSGILGR 301


>gi|239906902|ref|YP_002953643.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
 gi|239796768|dbj|BAH75757.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
          Length = 294

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 94/305 (30%), Gaps = 21/305 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +   +Y + A GL+++ G + +++        +G +S   L    G+  +L + + 
Sbjct: 9   LNGAMMGAMYGLTALGLTLIFGVMKVVNFAHGSLLMVGMFSAYWLIRLTGIHPYLALVIV 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             +    G  +    +K            ++      +I                     
Sbjct: 69  PPVLFVFGYYLQDVVIKPVFKAEGQVREPLT------VIIVTTGVWYVLDNLALMLFGAE 122

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
             TVR+ I    F     I  I  +   +     +  + L++R+T    A R    +++A
Sbjct: 123 YRTVRTAISNKSFALGEFIISIPKFSGFVVAVATAVGLALFMRKTKTGKALRATSLDREA 182

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +          AF + +A  G+AG                   +I    IV+LGG+ 
Sbjct: 183 ANLMGINQYRIYNIAFGLGTAIAGIAGCVLIPFYYV--YPSVGVVFDIRAFIIVVLGGLG 240

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        ++  +  +        +                ++     +++ ++    
Sbjct: 241 SIPGALLGGLVIGLIESVFSQFMASTWTEA-------------IIYAIFLIILFVKPSGF 287

Query: 340 LRLRT 344
              + 
Sbjct: 288 FGHKQ 292


>gi|291303047|ref|YP_003514325.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728]
 gi|290572267|gb|ADD45232.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728]
          Length = 292

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 59/303 (19%), Positives = 106/303 (34%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY +FA G ++V G L  L+L     Y  GA   + L    GL +WL  P+
Sbjct: 5   LANGLFSGAIYALFAIGFTLVFGILRHLNLAHAAIYTAGALIGIELVEGQGLPLWLAFPL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +   A G+I+   + +                    LI           +  A     
Sbjct: 65  AILAGTALGLILERSAFRPLAGRRDEHFAG--------LISSVAFGGMLIALLQARFGSE 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +  +S         + V   +     L     L   +   L ++A+  A R + +N +
Sbjct: 117 PRSFSQSAFPNEILTIAGVTVSLAQLLTLGLALALMLGLAWLLSKSALGRAMRAVAENPR 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +       +A+SSA    AG   A +  +    M   S  +   +++ILGG+
Sbjct: 177 AARVLGINVEGVTAGTYALSSALGSCAGVLMALNVGQGDLRM-GLSIELTGFAVIILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL     A  +L         +    + +++ F             + LF+++L R   
Sbjct: 236 GSLWGAMAAGLLLGFAEAFTVHLIDSTWKNVVAF-------------VLLFVILLTRPQG 282

Query: 339 LLR 341
           L  
Sbjct: 283 LFG 285


>gi|241768068|ref|ZP_04765566.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
 gi|241360637|gb|EER57630.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
          Length = 304

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 58/308 (18%), Positives = 122/308 (39%), Gaps = 33/308 (10%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
            +  Y+  + + +L+ V+FA  L  ++G  G+ S      +  GAY+  +L    G+ + 
Sbjct: 21  GAWPYVPVLLVDLLVAVLFASSLHFLMGPAGMHSFGHAAYFGSGAYAAALLVQSAGMRME 80

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L + ++ + +G   ++ G   ++  G YL + TL  ++I   +  +W  +T G  GI   
Sbjct: 81  LALLLAPLAAGGAALVYGWFCVRLSGVYLTMLTLAFAQITWALCFQWDAVTGGSNGIAGV 140

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
               +                  +  +   Y + L +      ++  +       A R +
Sbjct: 141 WPAPW------------------LASQEAYYLLTLALVAAGVLLLRRVLLAPFGYALRAV 182

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           RD+     ++       + +AF VS  F G+AGA    S+  ISP+     +++  + +V
Sbjct: 183 RDSAPRADAIGIDGRRLQWTAFVVSGVFAGLAGALHVFSKGSISPEGLSVGKSVDGLVMV 242

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ +L+      A    + +       Y+                 ++  A+  ++L
Sbjct: 243 LLGGVQTLAGPWVGAAAFTWLHDTVARNTDYWRA---------------VLGGAMLALVL 287

Query: 334 MRSHSLLR 341
           M    L  
Sbjct: 288 MFPQGLAG 295


>gi|317405793|gb|EFV86083.1| inner-membrane translocator [Achromobacter xylosoxidans C54]
          Length = 625

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 61/284 (21%), Positives = 118/284 (41%), Gaps = 18/284 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y   +  +ILI  +FA  L  + G  G+ S      + +GAY   +L     L +   +
Sbjct: 344 PYAGILLTEILIAALFAASLHFLTGLAGMTSFGHAAWFGLGAYGAALLLKLMALPMEAAL 403

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +    +    ++ G   ++  G YLA+ TL +++I   +  +W  +T G  G+      
Sbjct: 404 LLGPFAAALGALLFGWFCVRLSGVYLAMLTLAVAQILWALAYQWDEVTGGSNGL------ 457

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                          +PSS++    + YY+ L +C L  + +  L  + +  A R +RD+
Sbjct: 458 ------------IGLWPSSWLARGPWFYYLTLALCALGIAWLRRLAFSPLGYALRGVRDS 505

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                +L       +   F  +S   G+AG+ +A S+  I+PD+   S ++  + +V+LG
Sbjct: 506 GLRAEALGMDTRRIQWIGFVAASLAAGLAGSLYAFSKGSIAPDVLAVSRSVDGLVMVLLG 565

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           G+ +L+      A    + +       Y+   L     +  M  
Sbjct: 566 GLQTLAGPLVGAAAYTWLQDAAARSTEYWHAVLGLAILALVMLF 609



 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 94/303 (31%), Gaps = 17/303 (5%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL--SIWLLIPV 98
           +         + A GLS++ G   +++      Y +G Y        +G     W  + +
Sbjct: 12  NGLADASALFLVAAGLSLIFGVTRVVNFAHGSFYMLGIYLAWTFTRHFGDGAGYWAGLLL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+ +G  G    L  LK     L +  L+ +     I+        G   ++       
Sbjct: 72  AALATGLIGAAAELLVLKRLYRALELFQLLATFALVLIIGDATLAVWGPEDLFSPRAPGL 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                  +  +   ++     +   + L L RT      R   +N+ 
Sbjct: 132 SGA----------VDILGRRFPQYDLLLIAAGPVVLGLLWLLLMRTRWGRLLRAAAENRD 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L     +   SAF + +   G+ GA  A                     +V++GG+
Sbjct: 182 MLAALGVNQAWLFTSAFTLGAFLAGLGGALAAPRVPA--TLGLDLEIIASAFVVVVVGGL 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++  V  +   +          +  + +          + +V++ R   
Sbjct: 240 GSIPGAFLAAILICCVKAVFVFLGQVQIG---PWLFNLSKLTLLAEFAVMAVVLVARPWG 296

Query: 339 LLR 341
           LL 
Sbjct: 297 LLG 299


>gi|57903626|gb|AAW58113.1| putative branched-chain amino acid transporter [Burkholderia
           cepacia]
          Length = 638

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/318 (15%), Positives = 121/318 (38%), Gaps = 29/318 (9%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L+ L  G          +   I+++ + A G  ++    GLLS      +   AY   I 
Sbjct: 314 LVALVAGIALPWLVYPVLACDIVLWGLCALGFDLLFSFGGLLSFGQAAWWGASAYLTGIF 373

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            ++    +W+ +     IS    +  G+   + +G Y ++ T  ++EI   ++ +    T
Sbjct: 374 IAKLHYPMWIGLLAGVSISTLVALAFGMLITRKQGIYFSMVTFALAEIVYFVVNQSPAYT 433

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G+ G++   R                     +  +I  YYV L +  L+   +  + R+
Sbjct: 434 GGEDGLHGIMRGSLF--------------GVSLHNQITFYYVALVVVALTVGFVFRIIRS 479

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
               +    RD+++   S+   +   +L A+ +S+  I +AG  FA + + +S +   + 
Sbjct: 480 PFGLSLAGARDSERRMLSIGYDVRGLRLRAYVLSAFVISVAGGLFALAHEFVSLESVYWR 539

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
            +   I + +LGG  ++        +++ + +    +                     ++
Sbjct: 540 ASGEPIMMTLLGGAGTVFGPMLGAGVVLVLRDHLSTVTDSGN---------------LVL 584

Query: 325 VIALFLVILMRSHSLLRL 342
            +   +++++    +L  
Sbjct: 585 GVTSVVIVMLFRRGILGE 602



 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 103/303 (33%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +      M + GLS++ G + +++      Y +GA+   +LGS+ GLS+W  + +
Sbjct: 9   LFNGLVNGGFIAMMSLGLSVIFGMMRVVNFAHGALYMLGAFIAFVLGSQLGLSLWAALVL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +  GA G+++    L+          L+++     I+           G         
Sbjct: 69  APLAIGAFGLVLERLFLRHLYKVDPSYNLLLTFGLTLIIEDTMRRFFAVQGAPFLVPQSL 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G               FV+Y  + ++VL+    +       L RT +    R   +   
Sbjct: 129 AGA----------VNLGFVVYPKYRFFVLVVSLVICGGTWFMLDRTRLGALVRAGTERPN 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   +      AFA S+    +AG   +  ++                ++V+ GG+
Sbjct: 179 LLRCFGVRVPLLVSGAFAFSAGLAALAGVLASPLKNI--SPFMGQEMIATTFAVVVAGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  +  L          +                 I + +V+++R   
Sbjct: 237 GSIVGSVVMGFLVGVISTLAAIWYPPVATAAT--------------YIVMIVVLIVRPGG 282

Query: 339 LLR 341
           + R
Sbjct: 283 IFR 285


>gi|296122554|ref|YP_003630332.1| inner-membrane translocator [Planctomyces limnophilus DSM 3776]
 gi|296014894|gb|ADG68133.1| inner-membrane translocator [Planctomyces limnophilus DSM 3776]
          Length = 321

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 87/306 (28%), Gaps = 17/306 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-------------- 84
           + +      +Y + A G ++V G L  ++        +GA+                   
Sbjct: 8   LMTALAIGSLYALIALGYTMVYGVLKFINFAHSDIVVLGAWLSYSFAIRALPLVGLDAHN 67

Query: 85  -GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
             +   + +   I V+ +   +    +                ++++ I  ++L++    
Sbjct: 68  PTTPPPIWMTAGIFVAVLALCSLAGFLIERLAYRPLRRAPRLNVLITAIGVSLLLQNVGQ 127

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
            +   G         L      +         +V+  +    +      L  ++ L + R
Sbjct: 128 LDFVFGASPQKMPALLPNWELPIPFGQGESIRYVVLPLIDCIIFAVSGLLMLALELLIFR 187

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF-- 261
           T    A R +  N      +   +  A    F + SA  G AG  +      ++      
Sbjct: 188 TKFGTALRAVSFNTDFAALMGIPVDRAISLTFMLGSALAGAAGFLYVLKFPSMNQPAHSV 247

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
                +      ++GG+ ++        I+  V +         +  +  F     +   
Sbjct: 248 WVLLGLKAFVAAVVGGIGNVRGAVLGGFIIAFVEQFGAYYISSNYRDVYVFSLLILILLI 307

Query: 322 TLMVIA 327
               + 
Sbjct: 308 KPTGLL 313


>gi|289672630|ref|ZP_06493520.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein BraE [Pseudomonas syringae pv. syringae FF5]
          Length = 148

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 15/143 (10%)

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R  I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA+ +  ++P
Sbjct: 1   HRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFVNP 60

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y              
Sbjct: 61  TSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY-------------- 106

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
               L  I + L+++ R   L+R
Sbjct: 107 -RVLLFGILMVLMMIWRPRGLIR 128


>gi|229184173|ref|ZP_04311382.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus BGSC 6E1]
 gi|228599288|gb|EEK56899.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus BGSC 6E1]
          Length = 298

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 60/313 (19%), Positives = 127/313 (40%), Gaps = 31/313 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPV 98
           M  QI I+ +FA    +++G  G++S    + + IGAY   +L  R      + ++ I  
Sbjct: 1   MFTQIFIFAIFAMSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFFIGIVA 60

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +IS     I+GL SL+ +  + A+ TL +S++F  +  KW+ +T+G  G        F
Sbjct: 61  AIIISAIVSYIIGLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPDVF 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                    YYV L    +   ++    +++I    + I  N++
Sbjct: 121 RDRF-------------------TFYYVTLICLLIIFVLLRLFTKSSIGKVLKAISQNEQ 161

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   ++  K+ A  V+     ++G  F  +   ++  +F     +  + + ++GG+
Sbjct: 162 RVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGV 221

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L            +       +  Y+ S L  +     R T ++ +   +V+L+    
Sbjct: 222 GTLI---------GAIAGAGIIESLKYYLSELATEYPIFERWTIILGLLYIIVLLVFPKG 272

Query: 339 LLRLRTPSNFLER 351
           L+        ++R
Sbjct: 273 LVGTVKSLKNMKR 285


>gi|225853237|ref|YP_002733470.1| hypothetical protein BMEA_A1841 [Brucella melitensis ATCC 23457]
 gi|225641602|gb|ACO01516.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
          Length = 307

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 102/313 (32%), Gaps = 33/313 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89
           + +      IY + A G ++V G +G+++      + +GA+         +  I      
Sbjct: 13  VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 72

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L + L++ V+ +++G     +   + +       +A LI +      L  +  +T G   
Sbjct: 73  LMLLLMMIVAMLLTGLWSWAIERVAYQPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 132

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             V   L                  S V   +    V++    L       + RT++  A
Sbjct: 133 KPVPQLLNGSYELF----------GSGVTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 182

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +    +AG  + +    IS     F   +  
Sbjct: 183 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 241

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +  L        +  +  F               L 
Sbjct: 242 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 288

Query: 330 LVILMRSHSLLRL 342
           +V++     +L  
Sbjct: 289 IVLIFMPSGILGR 301


>gi|116250261|ref|YP_766099.1| sugar permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115254909|emb|CAK05983.1| putative sugar permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 395

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 94/314 (29%), Gaps = 19/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +   +      G   S   +  +  QI I  +     ++V+ + G + L+  +  
Sbjct: 86  LIVLVLAIVIFGLTIGGRFFSSYTLTLILQQIAIVGILGAAQTLVILTAG-IDLSIGVIM 144

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I A     +   YG+   + +    ++ G CG++ G      +                
Sbjct: 145 VISAVIMGNVAITYGIPTPIAVIAGLVVGGLCGLLNGFLVAYMKLPPFI----------- 193

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    I      IY A+                 F  SF +    +   ++ M  L 
Sbjct: 194 -VTLGTWNIVMATNFIYSANETIRDTDVDEKAPLLHLFAVSFKLGSAVLTLGVIAMVLLV 252

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L  TA       + D+ +A            L+ +A+S    G+A         
Sbjct: 253 LVLWYVLNHTAWGRHVYAVGDDPEAAKLSGIQTKKVLLTVYAISGVIAGLAAWVSIGRNG 312

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            ISP       N+  I+  ++GG+       S+        I+  V      +       
Sbjct: 313 SISPSSAVTDFNLQAITATVIGGISLFGGRGSILGTLFGAMIVGVVSMGLNMLGADPQWK 372

Query: 309 LLKFDCSFNMRHTT 322
           +L            
Sbjct: 373 VLLTGVLIIAAVAI 386


>gi|42527867|ref|NP_972965.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Treponema denticola ATCC 35405]
 gi|41818695|gb|AAS12884.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Treponema denticola ATCC 35405]
          Length = 299

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 98/305 (32%), Gaps = 16/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    Y +   G ++V G L L +      Y + AY    +  ++ ++  + +P+
Sbjct: 6   LINGLVIGSTYALVTIGFNMVYGVLELTNFAHSSFYMLAAYIGQFILLKFFMT--VSVPI 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I+    +I+                 I      + LI    +        +      
Sbjct: 64  ALIITFLTSIIITAFLGALMDKIALEPIRIKKGAPISSLISTVGVQTIINNSVLLIFGTV 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L           + +     +L+    +   +   + RT +  + R I  NQ 
Sbjct: 124 PLYFPDLLKLGKFTIYGGTVVQWIQVLILIMTLIIMLVLTFIVTRTRLGKSMRAISQNQV 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   I       F + +   G++G   A    R+   M   S  +   +  +LGGM
Sbjct: 184 AARLMGININRVITLTFFIGTTVAGISGLMVAMYYQRVDTLM-GASVGLKSFAAAVLGGM 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL   A    ++  +  L                   +     +  + L LV+L+R   
Sbjct: 243 GSLPGAAIGGLLIGLLETLFAAYIS-------------SGYRDIVAFVILILVLLIRPSG 289

Query: 339 LLRLR 343
           L+  +
Sbjct: 290 LMGKK 294


>gi|254719779|ref|ZP_05181590.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. 83/13]
 gi|265984799|ref|ZP_06097534.1| inner-membrane translocator [Brucella sp. 83/13]
 gi|264663391|gb|EEZ33652.1| inner-membrane translocator [Brucella sp. 83/13]
          Length = 302

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 101/313 (32%), Gaps = 33/313 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89
           + +      IY + A G ++V G +G+++      + +GA+         +  I      
Sbjct: 8   VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 67

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L + L++ V+ +++G     +   + +       +A LI +      L  +  +T G   
Sbjct: 68  LMLLLMMIVAMLLTGLWSWAIERVAYRPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             V   L                  S V        V++    L       + RT++  A
Sbjct: 128 KPVPQLLNGSYELF----------GSGVTISFKQIVVIVVTAILLTIFWYVVNRTSLGRA 177

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +    +AG  + +    IS     F   +  
Sbjct: 178 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 236

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +  L        +  +  F               L 
Sbjct: 237 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 283

Query: 330 LVILMRSHSLLRL 342
           +V++     +L  
Sbjct: 284 IVLIFMPSGILGR 296


>gi|256375807|ref|YP_003099467.1| urea ABC transporter permease [Actinosynnema mirum DSM 43827]
 gi|255920110|gb|ACU35621.1| urea ABC transporter, permease protein UrtC [Actinosynnema mirum
           DSM 43827]
          Length = 392

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/338 (13%), Positives = 98/338 (28%), Gaps = 28/338 (8%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           ++ L +       +   +  + L + + A G+++  G  G+L L   + + +G Y+  + 
Sbjct: 20  VVLLAVAPLVLSPFRLGLLAKYLCFAIVAVGIAVAWGRGGMLVLGQGVFFGLGGYAMGMH 79

Query: 85  --------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                          +W  +     +       +   +            L +    Q +
Sbjct: 80  LLLAEAGAAGLPDFMVWSGVEELPALWAPFANPVFALAAVVVLPGAVAFCLGLLVFRQRV 139

Query: 137 LIKWKPITNGKAGIYVA------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
              +  I +                +      + +   FF    +    +  +Y++    
Sbjct: 140 RGAYFAILSQALAAAFVILLVGRQGVTGGTNGLTNFGSFFGLDLADPAGQRAVYWITAAA 199

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +   +  W+ R         +RD +     L       K   F  S+   G+AGA F 
Sbjct: 200 LVVVFLVARWVVRGPFGRLLVAVRDGEDRVRFLGYDPALVKTLVFTGSAVAAGIAGALFV 259

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                ISP +   + ++ ++  V +GG  SL+        +     +             
Sbjct: 260 PVVGIISPALLGVAPSLELLVGVAVGGRFSLAGAVVGAIAVNYAKTV------------- 306

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
            F   F      L      LV++     L  L      
Sbjct: 307 -FSEDFAEGWLYLQGGLFVLVLVFAPRGLAGLVERGRE 343


>gi|213584358|ref|ZP_03366184.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
          Length = 208

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 73/208 (35%), Positives = 109/208 (52%), Gaps = 9/208 (4%)

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGAY++ +L   YGL  W  +P++ ++S A G ++G P L+ RGDYLAI TL   EI + 
Sbjct: 1   IGAYTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRI 60

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYV 186
           +L+    IT G  GI    +    G             +   FF          IF+Y V
Sbjct: 61  LLLNNTEITGGPNGISQIPKPTLFGLEFSRNTREGGWDTFSNFFGVKYDPSDRVIFLYLV 120

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            L +  LS  +I  L R  +  AW  +R+++ A  SL  +    KL+AF +S+AF G AG
Sbjct: 121 ALLLVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAG 180

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI 274
             FAA +  +SP+ F F+E+  V++IV+
Sbjct: 181 TLFAARQGFVSPESFTFAESAFVLAIVV 208


>gi|148989829|ref|ZP_01821123.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP6-BS73]
 gi|147924771|gb|EDK75855.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP6-BS73]
          Length = 289

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 105/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + ++ ++ + V
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +       IA LI +     +L        G            
Sbjct: 65  AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+  R+    +        +L     L   + + +++T +  A R +  +  
Sbjct: 115 -TRAFPQAIQTVRYDLGPISLTNVQLMILAISLILMILLQVIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA    AG   A   + + P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALASAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|254234209|ref|ZP_04927532.1| branched-chain amino acid transport protein BraD [Pseudomonas
           aeruginosa C3719]
 gi|126166140|gb|EAZ51651.1| branched-chain amino acid transport protein BraD [Pseudomonas
           aeruginosa C3719]
          Length = 307

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 92/305 (30%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I  +   +     +P+
Sbjct: 11  LVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYIAFIAITLLAMMGLDSVPL 70

Query: 99  SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             + + +  +I+                      I     I           +    +  
Sbjct: 71  MMLAAFSASIIVTSAFGYSIERVAYRPLRGGNRLIPLISAIGMSIFLQNAVMLSQDSKEK 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            + T +     F     + V+       + +    +   + L++ R+ +  A R   ++ 
Sbjct: 131 AIPTLLPGNFVFGESSMNGVVISYMQILIFVVTFLVMFGLTLFISRSRLGRACRACAEDL 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +A          I+     F   I   +  +LGG
Sbjct: 191 KMTNLLGINSNNIIALTFVIGAALAAVAAVLLGMQYGVIN-PGIGFLAGIKAFTAAVLGG 249

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L         +    +  ++ F               L LV+L R  
Sbjct: 250 IGSIPGAMLGGLLLGVAEAFGADVFGDQYKDVVAFG-------------LLILVLLFRPT 296

Query: 338 SLLRL 342
            +L  
Sbjct: 297 GILGR 301


>gi|15900645|ref|NP_345249.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae TIGR4]
 gi|111658358|ref|ZP_01409046.1| hypothetical protein SpneT_02000498 [Streptococcus pneumoniae
           TIGR4]
 gi|148985900|ref|ZP_01818994.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP3-BS71]
 gi|148992412|ref|ZP_01822107.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP9-BS68]
 gi|168484846|ref|ZP_02709791.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae CDC1873-00]
 gi|168486757|ref|ZP_02711265.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae CDC1087-00]
 gi|168488418|ref|ZP_02712617.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae SP195]
 gi|168492899|ref|ZP_02717042.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae CDC3059-06]
 gi|169832785|ref|YP_001694212.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae Hungary19A-6]
 gi|221231546|ref|YP_002510698.1| branched-chain amino acid transport system permease protein
           [Streptococcus pneumoniae ATCC 700669]
 gi|225854258|ref|YP_002735770.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae JJA]
 gi|14972224|gb|AAK74889.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae TIGR4]
 gi|147922046|gb|EDK73170.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP3-BS71]
 gi|147928729|gb|EDK79742.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP9-BS68]
 gi|168995287|gb|ACA35899.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae Hungary19A-6]
 gi|172042002|gb|EDT50048.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae CDC1873-00]
 gi|183570263|gb|EDT90791.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae CDC1087-00]
 gi|183573120|gb|EDT93648.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae SP195]
 gi|183576901|gb|EDT97429.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae CDC3059-06]
 gi|220674006|emb|CAR68519.1| branched-chain amino acid transport system permease protein
           [Streptococcus pneumoniae ATCC 700669]
 gi|225723977|gb|ACO19830.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae JJA]
 gi|301793909|emb|CBW36305.1| branched-chain amino acid transport system permease protein
           [Streptococcus pneumoniae INV104]
 gi|301799767|emb|CBW32336.1| branched-chain amino acid transport system permease protein
           [Streptococcus pneumoniae OXC141]
 gi|332073124|gb|EGI83603.1| branched-chain amino acid transport system / permease component
           family protein [Streptococcus pneumoniae GA17570]
 gi|332203904|gb|EGJ17971.1| branched-chain amino acid transport system / permease component
           family protein [Streptococcus pneumoniae GA47368]
 gi|332204759|gb|EGJ18824.1| branched-chain amino acid transport system / permease component
           family protein [Streptococcus pneumoniae GA47901]
          Length = 289

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + ++ ++ + V
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +       IA LI +     +L        G            
Sbjct: 65  AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+  R+    +        +L     L   + + +++T +  A R +  +  
Sbjct: 115 -TRAFPQAIQTVRYDLGPISLTNVQLMILAISLILMILLQVIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|331087665|ref|ZP_08336592.1| hypothetical protein HMPREF1025_00175 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330410357|gb|EGG89790.1| hypothetical protein HMPREF1025_00175 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 551

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/318 (8%), Positives = 86/318 (27%), Gaps = 9/318 (2%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y  IL +  V+  +   +      +   + ++  Q    +  A G++ ++   G   L+ 
Sbjct: 228 YIAILLIFIVLCIITPMIKGAPLLTYNNVLNVLQQASPKMFLALGVAGLILLAG-TDLSI 286

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +G  +  I+  +   +    +        +  +I+ +         L     +++
Sbjct: 287 GRMVGMGMTTATIIMHQGINTG--GVFGHIFDFTSTPIIVRVILSLVICILLCTFFTMIA 344

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             F         I+     + +   + +    V         P+  +        +++  
Sbjct: 345 GFFTAKFKMHPFISTMANMLVIFGLVTYATKGVSFGAIEPTIPNMIIPKINGFPTIIIWA 404

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 +     +T        +  N +A      ++    + AF ++    G       
Sbjct: 405 AAAVFIVWFIWNKTTFGKNLYAVGGNAEAASVSGISVFAVTVGAFILAGILYGFGSWLEC 464

Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFY 304
                     +     +  I+  ++      GG+  +S +     I   +      +   
Sbjct: 465 IRMVGSGSAAYGQGWEMDAIAACVVGGVSFTGGIGKISGVVVGVFIFTALTYSLTILGID 524

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +       +    
Sbjct: 525 TNLQFVFSGIIILVAVAL 542


>gi|167770773|ref|ZP_02442826.1| hypothetical protein ANACOL_02119 [Anaerotruncus colihominis DSM
           17241]
 gi|167667368|gb|EDS11498.1| hypothetical protein ANACOL_02119 [Anaerotruncus colihominis DSM
           17241]
          Length = 293

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 93/304 (30%), Gaps = 26/304 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +       Y + A G ++V G L L++      + +  Y   ++ +   +   + IP+ 
Sbjct: 11  LTGISLGGAYALIAIGYTMVYGILRLINFAHGDIFMMAGYF--MIFAMASIPWPIAIPLV 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + +   G+++   + K       ++ +I +     +L                +  +  
Sbjct: 69  ILGTVVLGVVIERAAYKPLRTAPRMSIMISAIGVSYLLQNLATYLFTAIPKGYPEIPFLK 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                       F    +   +  +   +    L   ++  +  T +  A R +  + + 
Sbjct: 129 RI----------FKIGDLSASLVTFITPVLTIVLVLLLMALINHTKVGMAMRAVSKDFET 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   I       F + SA   +    +   R  ++P        +      + GG+ 
Sbjct: 179 SRLMGIKINTIISITFVIGSALAAVGSILYFTDRMSVTPFS-GTLPGLKCFVAAVFGGIG 237

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        ++     L   M +  F+    F             + L +++L R   L
Sbjct: 238 SIPGAVVGGFVIGICETLLVAMGYSTFSDAFTF-------------LLLIVMLLFRPTGL 284

Query: 340 LRLR 343
              +
Sbjct: 285 FGEK 288


>gi|288959759|ref|YP_003450099.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288912067|dbj|BAI73555.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 390

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/367 (13%), Positives = 105/367 (28%), Gaps = 39/367 (10%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPL------LLFLFLGATKSQKYIDSMGIQILIYVMFAW 54
           +  F + L++   I+  +     +      L            +  S+  + L + + A 
Sbjct: 3   LRFFLMGLDRKAGIVLTILAFLAVAVPVMTLAVPADSPFHLSVFTVSLLGKYLCFALLAL 62

Query: 55  GLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
            L +V G  G+LSL     +A+G Y+  +   R      +                 LP 
Sbjct: 63  ALDLVWGYCGILSLGHAAFFALGGYAMGMYLMRQIGPRGVYGNPVLPDFMVFLNWKELPW 122

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA-------------------GIYVADR 155
                D    A +++  +   +   +                             +  D 
Sbjct: 123 YWLGFDQFWFAAIMVLVVPGALAFAFGWFAFRSRVTGVYLSIITQALTFALLLAFFRNDM 182

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
            +     +        +        + ++   +    LS  I   +  + +      +RD
Sbjct: 183 GFGGNNGLTDFKDILGYDIQADTTRVALFVATVVALALSYMIASGVIASKLGKVLVALRD 242

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
            +     +       KL A+ +S+   G+AGA +      I+P  F  + +I  +  V +
Sbjct: 243 AESRVRFMGYDTESYKLFAWTLSACMAGVAGALYVPQVGIINPSEFAPASSIEAVIWVAV 302

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  +L+       ++        G              +        +      V L  
Sbjct: 303 GGRGTLAGAILGAVLVNMGKSYFTG--------------ALPELWLFALGGLFVAVTLFL 348

Query: 336 SHSLLRL 342
              LL L
Sbjct: 349 PKGLLGL 355


>gi|316935918|ref|YP_004110900.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315603632|gb|ADU46167.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 341

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/337 (15%), Positives = 109/337 (32%), Gaps = 17/337 (5%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYI-DSMGIQILIYVMFAWGLSIVVGSL 63
            L   + D +  LL  +  L +   +G+  S   +  +     ++  + A GL++V G +
Sbjct: 14  PLPQARRDLVPVLLPAILALAMLPLVGSFSSWVTLTIASLAMGMMIFIMASGLTLVFGLM 73

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            +L+       A+GAY   ++      +S    +  +  +     +     S        
Sbjct: 74  DVLNFGHGAFIAVGAYVATLVLLPLAAMSGADSLLTNLAVLVPAVLAAMAVSGALGVVVE 133

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
            +  L +       ++              A     +            F    V    +
Sbjct: 134 RVLILPVYGQHLKQILMTTGGLIVAEQALYALWGPQIIPLPLPTALRGSFIIGDVAIAKY 193

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
              V+L    +   I L L RT I    R   +N++   +L   +    L  F V SA  
Sbjct: 194 RLLVMLVGLVVFVGIQLTLNRTKIGLLIRAGVENREMVEALGYHVKRLFLGVFMVGSALA 253

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+ G  +A  R+++          +++  +VI+GG+ S+        ++  V      + 
Sbjct: 254 GLGGVMWALYREQV-HASMGNELTVLIFIVVIIGGLGSVGGCFIGALLVAMVANYGGFL- 311

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
                                 ++ +  +++ R   L
Sbjct: 312 -------------LPKLALVSNILLMVAILMWRPRGL 335


>gi|259507034|ref|ZP_05749934.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Corynebacterium efficiens
           YS-314]
 gi|259165312|gb|EEW49866.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Corynebacterium efficiens
           YS-314]
          Length = 377

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/323 (16%), Positives = 96/323 (29%), Gaps = 30/323 (9%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG------SRYG 89
             +  ++  +++ Y + A G+ I  G  G+L+L   + + IGAY   +            
Sbjct: 58  STFQLNLMARLVCYAIVAVGIGIAWGRGGMLTLGQGVFFGIGAYVMAMHMLLADAAMMGQ 117

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF----------QNILIK 139
                +                 P +      +  A +  +  F             ++ 
Sbjct: 118 TVPAFMSLAGTSDVPLWWRPFANPVVTVLAVIILPALVAFALGFPIFKRRIKGAYFAILN 177

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                     +            +     FF F        + +Y +  G+  L  +I  
Sbjct: 178 QALAAAVVVLLVGQQGALGGSNGLNGFTSFFGFTLYDPTNRVVLYLMAAGVLLLMVAISY 237

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           WL R+         RD ++    L     + K  A+ +++   G+AGA F      ISP 
Sbjct: 238 WLMRSRYGELLVATRDTEERVRFLGYDPAWIKTGAYVIAAMMAGIAGALFVPIMGIISPA 297

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                 +I+ +  V  GG  SL         L  +                    SF   
Sbjct: 298 EIGVVPSIVFVIAVAAGGRNSLFGPVVGALALGWMESAL--------------AQSFPSA 343

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
            +      L LVI++    +  L
Sbjct: 344 WSYFQGAILVLVIVLLPGGIASL 366


>gi|212711023|ref|ZP_03319151.1| hypothetical protein PROVALCAL_02092 [Providencia alcalifaciens DSM
           30120]
 gi|212686191|gb|EEB45719.1| hypothetical protein PROVALCAL_02092 [Providencia alcalifaciens DSM
           30120]
          Length = 308

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 87/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW-LLIP 97
             +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +    +   
Sbjct: 12  FLNGLTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAGLMMLGIDVGWI 71

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           + A    A  ++                      I     I           +    R  
Sbjct: 72  LVAAAFVAAIVVSSSYGWSIERVAYRPVRHSKRLIALISAIGMSIFLQNYVSLSQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + +              I       + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLITGQWIIGESDGFSAIVTKMQLTIWIVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     +        +  ++ F               L  V+L+   
Sbjct: 251 IGSIPGAMLGGLILGVAEAMTSAYLSTEYKDVVSFG-------------LLIGVLLIMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|318604453|emb|CBY25951.1| urea ABC transporter, permease protein UrtC [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 348

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 94/309 (30%), Gaps = 17/309 (5%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
              +       L++   A GL+ + G  G+LS      + +  Y+Y ++   +G  +   
Sbjct: 38  DSAMIGDFSYFLLWTFCAIGLAAMWGHGGILSFGQTAFFGLAGYTYGVMTLNFGDGVLST 97

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
                M       +            +    + +  +   ++++            +   
Sbjct: 98  WSGLIMALLVAAAVAAALGYLMFYGSVTGIFIGIVTLSFTLVLETFMSQTAGPQWAIGSA 157

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEI---FMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                  +  +           +  +     YY+++ +       +  L R+       +
Sbjct: 158 RLNGFNGMSGMPPLSLPWFGGELLTLEGNSFYYLIILLLAGVYWAVRRLLRSNFGLTLAS 217

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           IR+N +    L   I   +L  F +     G++GA +      I+P     +   + +  
Sbjct: 218 IRENPRRAEMLGIDIRRYQLLVFVLGGVLSGLSGALYTLWGSYITPSSMGLTAAAMPVIW 277

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           V   G  ++      TA+L+ + +                    +     L+   L  V+
Sbjct: 278 VATAGRKNIFGTVVITALLVWLSQWLAIYG--------------SEYAMILLGAILLFVV 323

Query: 333 LMRSHSLLR 341
           L   + LL 
Sbjct: 324 LAAPNGLLP 332


>gi|160895671|ref|YP_001561253.1| urea ABC transporter permease UrtC [Delftia acidovorans SPH-1]
 gi|160361255|gb|ABX32868.1| urea ABC transporter, permease protein UrtC [Delftia acidovorans
           SPH-1]
          Length = 396

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 54/331 (16%), Positives = 100/331 (30%), Gaps = 36/331 (10%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             +  ++  + L Y   A GL +V G  G+LSL   + + +G Y+  +            
Sbjct: 32  DIFRLNLVGKYLTYAFVAIGLVMVWGYGGVLSLGQGVFFGLGGYAMAMFLKLEASDPIST 91

Query: 96  IPVSAMISGACGMIMGL-----PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              S            L       L F+    ++A +I        LI +        G+
Sbjct: 92  KIQSTPGIPDFMDWNQLTELPSFWLPFKSLPFSLAAVIAVPTLLAWLISFAMFKRRVGGV 151

Query: 151 YVA-----------------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           Y A                          +  L   + + +     +  +YYV + +   
Sbjct: 152 YFAIITQAVALIVTVLIIGQQGYTGGVNGMTDLKTLWGWDTRTDSAKYILYYVCVALLIG 211

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  +  W++   +      +RD +         +   K+  F +++A  G+ GA F    
Sbjct: 212 AIVLCRWIQTGKVGTLLLAMRDKEDRVRFSGYDVANFKVFVFCLAAALSGIGGAMFTLQV 271

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             +SP       +I ++    +GG  SL      T ++                    F 
Sbjct: 272 GFMSPSFVGIVPSIEMVIYAAVGGRMSLVGAVYGTLLVNAGKTY--------------FS 317

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
            SF      LM      V +     L  L  
Sbjct: 318 ESFPDLWLFLMAGLFIGVTMAFPMGLAGLWE 348


>gi|163845367|ref|YP_001623022.1| hypothetical protein BSUIS_B1267 [Brucella suis ATCC 23445]
 gi|225628348|ref|ZP_03786382.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|261219367|ref|ZP_05933648.1| inner-membrane translocator [Brucella ceti M13/05/1]
 gi|261322429|ref|ZP_05961626.1| inner-membrane translocator [Brucella ceti M644/93/1]
 gi|294851031|ref|ZP_06791707.1| branched-chain amino acid transport system permease [Brucella sp.
           NVSL 07-0026]
 gi|306844772|ref|ZP_07477357.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO1]
 gi|163676090|gb|ABY40200.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|225616194|gb|EEH13242.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|260924456|gb|EEX91024.1| inner-membrane translocator [Brucella ceti M13/05/1]
 gi|261295119|gb|EEX98615.1| inner-membrane translocator [Brucella ceti M644/93/1]
 gi|294821674|gb|EFG38670.1| branched-chain amino acid transport system permease [Brucella sp.
           NVSL 07-0026]
 gi|306274944|gb|EFM56714.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO1]
          Length = 307

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 102/313 (32%), Gaps = 33/313 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89
           + +      IY + A G ++V G +G+++      + +GA+         +  I      
Sbjct: 13  VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 72

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L + L++ V+ +++G     +   + +       +A LI +      L  +  +T G   
Sbjct: 73  LMLLLMMIVAMLLTGLWSWAIERVAYRPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 132

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             V   L                  S V   +    V++    L       + RT++  A
Sbjct: 133 KPVPQLLNGSYELF----------GSGVTISLKQIVVIVVTAILLTIFWYVVNRTSLGRA 182

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +    +AG  + +    IS     F   +  
Sbjct: 183 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 241

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +  L        +  +  F               L 
Sbjct: 242 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 288

Query: 330 LVILMRSHSLLRL 342
           +V++     +L  
Sbjct: 289 IVLIFMPSGILGR 301


>gi|323700059|ref|ZP_08111971.1| inner-membrane translocator [Desulfovibrio sp. ND132]
 gi|323459991|gb|EGB15856.1| inner-membrane translocator [Desulfovibrio desulfuricans ND132]
          Length = 300

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 83/304 (27%), Gaps = 18/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++      +A G Y  VIL S            
Sbjct: 8   LINGITLGGVYALIALGYTMVYGIIQLINFAHGEFFAAGGYMGVILISYLSSQGLHPYAC 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+          L ++                      +             +      
Sbjct: 68  LAISLVLAMGYCALLAMAVEQLAYKPLRQASRLAALLSALGMSIF----LQNGLMLTQGV 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 + I    F    +        +++    L   + + + +T I  A R    ++ 
Sbjct: 124 YDRPYPTEITSGGFEVGALSISYMQILIVVVTALLLVGLNILVFKTRIGRAMRATAQDKV 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           FAV +     AG         ++  M  F   I   +  +LGG+
Sbjct: 184 MSALVGINSNRIIALTFAVGAGLAAAAGIMVGLYYGSVNYTM-GFVPGIKAFAAAVLGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +++       I+  V     G     +  +  F             I L  V+  +   
Sbjct: 243 GNITGALIGGLIIGMVEIFAAGYISGEYKDVFAF-------------IILIGVLYFKPTG 289

Query: 339 LLRL 342
           ++  
Sbjct: 290 IMGE 293


>gi|242309181|ref|ZP_04808336.1| abc transport system permease protein [Helicobacter pullorum MIT
           98-5489]
 gi|239524222|gb|EEQ64088.1| abc transport system permease protein [Helicobacter pullorum MIT
           98-5489]
          Length = 299

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 89/290 (30%), Gaps = 11/290 (3%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +Y + A G ++V G L L++        +GA+      +  GL  +     +
Sbjct: 11  VNGLSLGSMYALIAIGYTMVYGCLRLINFAHADIIMVGAFLSFFAINSLGLPFYASAIFA 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            ++    G+ +   +         I+ LI +      L     +  G    + +   +F 
Sbjct: 71  VLVCAILGVGIDRVAYLPLRSSPRISMLITAIGVSFFLENLFNVFFGSTPRFFSAPEFFS 130

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T          F    +        V +    L   ++ +L RT    A R    +   
Sbjct: 131 HT----------FNLGSINLTYITIIVPIVTLLLLVVLLQFLYRTKQGMAIRATAFDINT 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +       F + S   G+ G F+A S   I P M      +   +  +LGG+ 
Sbjct: 181 VRLMGINVNNIIGLVFVIGSTLAGIGGIFYAISYPTIDPLM-GVLIGLKAFAAAVLGGIG 239

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           S+        IL     +   +          F   F +       + + 
Sbjct: 240 SVGGAVLGGFILGFTEVMAVAIFPELGGYKDAFAFLFLILVLLFRPVGIM 289


>gi|220921218|ref|YP_002496519.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219945824|gb|ACL56216.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 306

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 93/309 (30%), Gaps = 15/309 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     ++  + A GL+++ G + L++L     Y +GAY    L       +  L+   
Sbjct: 10  LNGVQLGILLFLVAAGLTLIFGVMDLINLAHGALYMVGAYLAATLTGLTDSFLLGLVLAL 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                   ++  L              L    +   +    + +                
Sbjct: 70  PATLLVGLVLEVLVIRHLYDRDHLDQVLATFGLILILNEGVRILWGAAPMSVPVPEALSG 129

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +   +           Y ++   ++      +  + L + RT +    R    +   
Sbjct: 130 SVHLVGTLH----------YPLYRLAIIAAGLAAALGLHLLVNRTRLGMRLRAGATHGAM 179

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   I    +  F + +   G AGA  A             S  I+   ++++GG+ 
Sbjct: 180 VAALGVDIRRLFMVVFGLGAMLAGFAGAMVAPILSV--DPGMGDSVLILTFVVIVIGGVG 237

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMRS 336
           S+     A+ I+    +L          SL+    +     T    L+ I +  V+  R 
Sbjct: 238 SVRGAFVASLIVGLADQLGRTFGPILLRSLMDASAASQTGRTLAPMLIYILMAAVLFFRP 297

Query: 337 HSLLRLRTP 345
             L   R  
Sbjct: 298 AGLFPARGR 306


>gi|116694036|ref|YP_728247.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113528535|emb|CAJ94882.1| ABC-type transporter, permease component: HAAT family [Ralstonia
           eutropha H16]
          Length = 304

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 87/298 (29%), Gaps = 17/298 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++ A GL+I+ G +G++++      AIGAY+  +  +         +P    +
Sbjct: 18  LSLFSVLLLMALGLAIIFGQMGVINMAHGEFMAIGAYTIFLASTTVERLAPAWMPHYFPV 77

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +      +   +       L     +       +L  W      +           +  T
Sbjct: 78  AICAAFAIAFSAGWLAEWAL--IRHLYKRPLDTLLATWGLSLGMQQAFRSTFGPKEVSPT 135

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P+  +   I   +V+     ++  + L L R+      R    N+    +
Sbjct: 136 LPDWLMGSWAPAPGLDIPINGLFVMALTLCVAGLVWLALYRSRWGLRVRATTANRAMANA 195

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     G+AGA  A +    +         +    +V  GG  SL+
Sbjct: 196 AGINTRRTDRLTFAIGCGIAGVAGA--AFTTIGSTGPTSGSLYLVDAFLVVTFGGAASLA 253

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
               +   +     +           +L       +              ++R   L 
Sbjct: 254 GTVASAFGIAQTQSITEFFMTGSMARVLTLLLIVTIL-------------MIRPQGLF 298


>gi|90419081|ref|ZP_01226992.1| putative permease protein, branched-chain amino acid ABC-type
           transport system [Aurantimonas manganoxydans SI85-9A1]
 gi|90337161|gb|EAS50866.1| putative permease protein, branched-chain amino acid ABC-type
           transport system [Aurantimonas manganoxydans SI85-9A1]
          Length = 625

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 54/325 (16%), Positives = 124/325 (38%), Gaps = 34/325 (10%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +  +V   +    L       +   +     +  +FA  L   +G  G++S      + +
Sbjct: 314 VTILVVLAVAGFALLPLVESGFALILLTDFFVAALFAASLQFFMGLGGMISFGHAAFFGL 373

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY   +  +  GL ++  + +     G   +++G   ++  G YLA+ TL  ++I   +
Sbjct: 374 GAYGAALAATALGLPMFAAMALGVATGGLGALVIGWFCVRLSGVYLAMLTLAGAQILWAV 433

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            ++W+ +T G  GI                     +P  F       Y + LG+C +   
Sbjct: 434 ALQWQDVTGGDDGILGV------------------WPDRFAASRTVYYLIALGLCAVGLL 475

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +I  +         R  RD+     ++   +   +L+AF ++  F  +AG  F  ++  +
Sbjct: 476 LIRRIAHAPFGYLLRATRDSPLRAEAIGLDVRGRQLAAFVIAGLFAALAGTVFVFAKGSV 535

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
            P +    +++  + +V++GG+ +LS      AI +G+ +    +               
Sbjct: 536 FPTILAVGQSVDALLMVLIGGVQALSGPIAGAAIFVGIEDWVGRL--------------- 580

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                ++  + +  V ++    +  
Sbjct: 581 -PYWRSIFGVIILAVCILAPQGIAG 604



 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 89/303 (29%), Gaps = 23/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +         + A GLS++ G   +++      + +GAY      +            
Sbjct: 12  LLAGLADASSLFLVAAGLSLIFGVTRIVNFAHGSLFMLGAYVAYSAVTWLPTGFLGFWGG 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               + A  +I GL  +       A A L        +L+  + +     G         
Sbjct: 72  MLAAAVAVALIGGLIEIVILRRLYASAELYQLVATFGVLLVIQDVALAIWGPEDLLAPRA 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                     +   ++     + A++ L L RT      R   ++++
Sbjct: 132 PGL-------GGALRIFGEPVPQYDLLLIAAGPVVLAAVWLVLNRTRWGTLVRAATEDRE 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L         + F + +   G+AGA                   +    IV++GG+
Sbjct: 185 MTGALGIDQARLFTTVFMLGAFLAGLAGALQTPR--EAVSLALDLDVVVEAFVIVVVGGL 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++  +                     F    T L  + +  ++++R + 
Sbjct: 243 GSIGGAYAAAILIGVLNAFT--------------LLWFPTLATVLPFLVMAAILVVRPYG 288

Query: 339 LLR 341
           L  
Sbjct: 289 LFG 291


>gi|117924328|ref|YP_864945.1| branched-chain amino acid ABC transporter permease [Magnetococcus
           sp. MC-1]
 gi|117608084|gb|ABK43539.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Magnetococcus sp. MC-1]
          Length = 384

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/350 (14%), Positives = 105/350 (30%), Gaps = 35/350 (10%)

Query: 14  ILCLLAVVYPLLLFLFLG--ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
           ++   A+V P+L              Y+ S+  + L + + A    ++ G  G+LSL   
Sbjct: 23  LVLGAAIVVPILNLAVAPESPYHIPNYVVSLMGKYLAFALLALSADLIWGYAGILSLGHG 82

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +A+G Y+  +   R      +                 LP      ++ A A L++  
Sbjct: 83  AFFALGGYAMGMYLMRQIGDRGVYGNPELPDFMVFLNWHELPWYWHGFEWFAFAALMVLV 142

Query: 132 IFQNILIKWKPITNGKA-------------------GIYVADRLYFLGTTVRSLIRFFRF 172
           +   + + +                             +  D  +     +        F
Sbjct: 143 VPGLLALVFGWFAFRSRVTGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDLLGF 202

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
                     ++ V      LS  +  ++  + +      +RD +     +   +   KL
Sbjct: 203 DLHDDTTRAALFSVTALALALSYGVCRYITASKLGRVLLAVRDAESRTRFMGYRVENYKL 262

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             F V++   G+AGA +      I+P  F    +I +I  V +GG  +L        ++ 
Sbjct: 263 FVFVVAAMMAGLAGALYVPQVGIINPGEFSPGNSIEIIIWVAVGGRGTLYGAVLGAVLVN 322

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  G              +       ++      V L     ++ L
Sbjct: 323 YGKTYFTG--------------ALPEAWLYMLGALFVAVTLFMPQGVVGL 358


>gi|306845382|ref|ZP_07477957.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO1]
 gi|306274298|gb|EFM56110.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO1]
          Length = 360

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 104/311 (33%), Gaps = 26/311 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                + + +  IQ+LI  +FA   S++ G  G+LS      + +G+++ V   + +G  
Sbjct: 20  PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHAMNAFGGE 79

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L  P+  +     G++ GL +  F      +   +++     +L    P   G  G  
Sbjct: 80  GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFG-- 137

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                          +YY+ L     S  ++  L  T       
Sbjct: 138 ---------GEAGVSSFRMPAWGFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R+N      L   +       FA+S+ F G+AGA  A + +  +  +F+   +  V+ 
Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
              +GG+ +    A   A +     +   +   +                    +   LV
Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLIFVLV 293

Query: 332 ILMRSHSLLRL 342
           ++     L+  
Sbjct: 294 MMFLPRGLVGE 304


>gi|183603798|ref|ZP_02721345.2| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae MLV-016]
 gi|183578498|gb|EDT99026.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae MLV-016]
          Length = 292

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 107/303 (35%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + ++ ++ + V
Sbjct: 8   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++   G+++   + +       IA LI +     +L        G            
Sbjct: 68  AMLVTAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+  R+    +        +L     L   + + +++T +  A R +  +  
Sbjct: 118 -TRAFPQAIQTVRYDLGPISLTNVQLMILAISLILMILLQVIVQKTKMGKAMRAVSVDSD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 177 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 236 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 282

Query: 339 LLR 341
           +L 
Sbjct: 283 ILG 285


>gi|313126233|ref|YP_004036503.1| amino acid/amide ABC transporter membrane protein 1, haat family
           [Halogeometricum borinquense DSM 11551]
 gi|312292598|gb|ADQ67058.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Halogeometricum borinquense DSM 11551]
          Length = 337

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/344 (12%), Positives = 104/344 (30%), Gaps = 27/344 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             L A ++   L  FL        + +   +  +YVM A GL+++ G +G+L+       
Sbjct: 3   ALLTAPLFLDALGDFLTLETLSSVLVNGLSKAALYVMLASGLTLIFGLMGVLNFAHGSLT 62

Query: 75  AIGAYSYVILGS--------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
            IGAY   ++                 +  ++ +     + +     + +          
Sbjct: 63  MIGAYLGGLVMVVLAGSAAGPGTRFLAFFAAVAVAFAALSALGAVLEVGLIRTLYDRPPL 122

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           Y  + T  ++ +   +                    +      +  I   +     +   
Sbjct: 123 YQILLTFGLTLMLDELARIVVSFYG-----LQPISDWQAAFATKPQILVQQVDLGIISVS 177

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
               + +L       +I  +L +T      R   ++ +   +L   +       FA+   
Sbjct: 178 GLALFEILFGVLTVVAIWAFLTQTRYGLYIRAGSEDAEMIEALGVDVRRVFTFVFAIGVG 237

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             G+AG   A      +         +    +VI+GG+ +      A  I+  V      
Sbjct: 238 IAGVAGVLLAWDPSWGASVPLAAETLLPAFVVVIVGGLGTFRGTVVAGTIVGLV------ 291

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                     +   +F       + + L +V++++   L  +  
Sbjct: 292 --DATMTWWFQNAIAFTGLPQLTIFLILVVVLILKPQGLFGVEE 333


>gi|330938380|gb|EGH42006.1| inner-membrane translocator [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 411

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 69/232 (29%), Gaps = 4/232 (1%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 139 ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 198

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 199 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 256

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 257 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 316

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            S   G+ G   A S+          S  I    +V+LGG+  L+    A  
Sbjct: 317 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAF 366


>gi|332717179|ref|YP_004444645.1| branched chain amino acid ABC transporter, membrane spanning
           protein [Agrobacterium sp. H13-3]
 gi|325063864|gb|ADY67554.1| branched chain amino acid ABC transporter, membrane spanning
           protein [Agrobacterium sp. H13-3]
          Length = 335

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/320 (16%), Positives = 112/320 (35%), Gaps = 27/320 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L++   +          ++  +I+   +    + +V G  G+ +L     +  GAY+  
Sbjct: 28  LLIIIAAIAGYFLFPDNLALLTRIIAIALLVLSIDLVTGYCGVATLGHAALFGAGAYAAG 87

Query: 83  ILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
           I  + Y      L+  + A + G  G++ G   L+  G    + ++ +  +F     K  
Sbjct: 88  IAAAHYGITDPLLMTLIGAAVGGIAGLLSGTILLRAHGLPQLVLSIAVVHLFHEAANKAS 147

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
             T G  G+         GT              F +Y    Y   + +  L    +  +
Sbjct: 148 DWTGGSDGLAGVSPDALFGT------------FEFDLYGRTAYIYGVCLLLLVFLALRVV 195

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +      R ++ +     ++  ++    L  FA+S    G+ GA  A S   +  D  
Sbjct: 196 VNSPFGMLCRGVKQDSIRIQAMGGSVNGTILKMFAISGIVAGIGGALNAISTQVVGLDSL 255

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F+ +   + +++LGG  SL      T   +   ++    N +++               
Sbjct: 256 SFTLSAEALVMLVLGGAGSLYGALIGTVTFMWFEDVVSAANPFHW--------------L 301

Query: 322 TLMVIALFLVILMRSHSLLR 341
           T++ + L  V+L     L  
Sbjct: 302 TIVGLLLIAVVLFAPRGLYG 321


>gi|323701783|ref|ZP_08113454.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574]
 gi|323533319|gb|EGB23187.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574]
          Length = 293

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 93/288 (32%), Gaps = 11/288 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GAY      +  G S    + +
Sbjct: 8   LINGISLGSIYALIALGYTMVYGIVQLINFAHGDVYMVGAYLGFFATAILGWSFLPALVM 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G+++   + K   +   I  LI +      L     +            L  
Sbjct: 68  AMIVCAILGVVIEKLAYKPLRNAPRITALITAIGVSLFLEYGTMLLVTPQVRTFPQVLPE 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   +             +        +L+    L   +   + +T I  A R +  +++
Sbjct: 128 VQWKL----------FGNLTVSNRQVIILVITIVLMVLLQYIVHKTKIGKAMRAVSYDKQ 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +     + FA+ SA    AG       + I+P M      +      +LGG+
Sbjct: 178 AAQLMGINVNQTISATFAIGSALAAAAGVLVGIYYNAINPLM-GIMPGLKAFVAAVLGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             +        +L  V  +  G     +   + F     +       +
Sbjct: 237 GIIPGAMTGGFLLGIVEAMVSGYGKSLYRDPVAFVILIIILIVKPAGL 284


>gi|15596270|ref|NP_249764.1| branched-chain amino acid transport protein BraD [Pseudomonas
           aeruginosa PAO1]
 gi|116049002|ref|YP_792196.1| branched-chain amino acid transport protein BraD [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|218892964|ref|YP_002441833.1| branched-chain amino acid transport protein BraD [Pseudomonas
           aeruginosa LESB58]
 gi|296390563|ref|ZP_06880038.1| branched-chain amino acid transport protein BraD [Pseudomonas
           aeruginosa PAb1]
 gi|313106027|ref|ZP_07792286.1| branched-chain amino acid transport protein BraD [Pseudomonas
           aeruginosa 39016]
 gi|115122|sp|P21627|BRAD_PSEAE RecName: Full=High-affinity branched-chain amino acid transport
           system permease protein BraD
 gi|9946989|gb|AAG04462.1|AE004539_4 branched-chain amino acid transport protein BraD [Pseudomonas
           aeruginosa PAO1]
 gi|216864|dbj|BAA14255.1| integral membrane protein [Pseudomonas aeruginosa]
 gi|115584223|gb|ABJ10238.1| branched-chain amino acid transport protein BraD [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|218773192|emb|CAW29004.1| branched-chain amino acid transport protein BraD [Pseudomonas
           aeruginosa LESB58]
 gi|310878788|gb|EFQ37382.1| branched-chain amino acid transport protein BraD [Pseudomonas
           aeruginosa 39016]
          Length = 307

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 91/305 (29%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I  +   +     +P+
Sbjct: 11  LVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYIAFIAITLLAMMGLDSVPL 70

Query: 99  SAMIS-GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             + +  A  ++                      I     I           +    +  
Sbjct: 71  MMLAAFAASIIVTSAFGYSIERVAYRPLRGGNRLIPLISAIGMSIFLQNAVMLSQDSKEK 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            + T +     F     + V+       + +    +   + L++ R+ +  A R   ++ 
Sbjct: 131 AIPTLLPGNFVFGESSMNGVVISYMQILIFVVTFLVMFGLTLFISRSRLGRACRACAEDL 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +A          I+     F   I   +  +LGG
Sbjct: 191 KMTNLLGINSNNIIALTFVIGAALAAVAAVLLGMQYGVIN-PGIGFLAGIKAFTAAVLGG 249

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L         +    +  ++ F               L LV+L R  
Sbjct: 250 IGSIPGAMLGGLLLGVAEAFGADVFGDQYKDVVAFG-------------LLILVLLFRPT 296

Query: 338 SLLRL 342
            +L  
Sbjct: 297 GILGR 301


>gi|317405430|gb|EFV85742.1| hypothetical protein HMPREF0005_01546 [Achromobacter xylosoxidans
           C54]
          Length = 328

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/310 (16%), Positives = 121/310 (39%), Gaps = 30/310 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
             + + ++ ++  ++L+Y + A  L++++G  G++S    +   +GAY+  +L      +
Sbjct: 26  QWQGEPFLLALFGRVLVYGIAALALNLLLGYGGMVSFGHALYLGLGAYAVGVLNHYGIEN 85

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            WL +  +     A G++ G   ++  G    + TL  +++F  +    +          
Sbjct: 86  GWLHLLAALGACAAVGLVSGYVVMRTSGIAFIMITLAFAQMFYFLATGLEGFGG------ 139

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                        SL     F    +   + +YY   G+  L+ + +  L +       R
Sbjct: 140 ---------DDGMSLFAGSDFGLFRLDTPLALYYTAFGVLLLALAALRRLVQAPFGMVLR 190

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
             + N++   +L    +  +L+A+ +S+   G+AG   A     +SP    ++ +  +I 
Sbjct: 191 GCQANERRMRALGFATLRYRLAAYVLSAMVCGVAGVLLANLTLYVSPSYLAWTTSGELIV 250

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +V LGG+ ++          + + E    +  ++                 +M + +  V
Sbjct: 251 MVALGGLGTVVGPVAGALAFLLLEEGLKLLTDHW---------------MLVMGLLIVGV 295

Query: 332 ILMRSHSLLR 341
           +L+    L  
Sbjct: 296 VLVSRRGLYG 305


>gi|300869773|ref|YP_003784644.1| sugar ABC transporter inner membrane protein [Brachyspira
           pilosicoli 95/1000]
 gi|300687472|gb|ADK30143.1| ABC sugar transporter, inner membrane subunit [Brachyspira
           pilosicoli 95/1000]
          Length = 405

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 101/315 (32%), Gaps = 20/315 (6%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            +  +  ++  +   +      +      +          A G++ V+   G + L+   
Sbjct: 38  FLTIVALLILYVFFVIAGRNFFTFDTFSLILRNSYFIGFLAIGVTFVI-ITGGIDLSIGS 96

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
                A    ++ + +   +W ++ +   ++   G I G     F               
Sbjct: 97  LSLFAAMVGGVMITNFKTPMWAVLIIVIAVATLGGFINGCLISYFHLPPFIAT------- 149

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
                +    +T G +GI    +  +  T       +FR   +         +++L +  
Sbjct: 150 -----LGMLMVTKGLSGIVSKSQTIYYPTITDPDYGWFRVLFNATESNFPSGFIMLAIFT 204

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           + + I+L   +T +      +  N++A           K+ A+ ++  F G+ G  FAAS
Sbjct: 205 IISVIVL--TKTIVGRYIFALGSNEEAARLSGIKTNKWKIIAYTIAGFFCGIGGLTFAAS 262

Query: 253 RDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
              ISP   +  E   + ++VI      GG+ S+        I+  +      +    F 
Sbjct: 263 YSSISPGAGQGYEFDAIAAVVIGGTSLSGGVGSIIGTIIGVYIMSVLKVGLPSVGVEQFF 322

Query: 308 SLLKFDCSFNMRHTT 322
                     +    
Sbjct: 323 QYFTIGIVVIIAVLI 337


>gi|134287660|ref|YP_001109826.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|134132310|gb|ABO60045.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia vietnamiensis G4]
          Length = 305

 Score = 74.5 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 89/305 (29%), Gaps = 17/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++   GL+++ G +G++++       IGAY+  +           L PV    
Sbjct: 18  LSLFSVLLLMGLGLAVIFGQMGVINMAHGEFMTIGAYTVYLFSWFSQNVWHALTPVYFFF 77

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +      +   +       L     +       +L  W      +           +   
Sbjct: 78  AILAAFALAFAAGWLAEWAL--IRHLYKRPLDTLLATWGLSLGMQQVFRSTFGPKEVSPA 135

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P+  +   +   +V+     ++  ++L L R+      R    N+    +
Sbjct: 136 LPDWLMGSWEPTPGLDIPVSGMFVMGLALLMTGGLLLALYRSRWGLRVRATVANRPMANA 195

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     G+AGA F A     +         +    +V  GG  SL 
Sbjct: 196 AGINTRRTDRMTFAIGCGIAGVAGAAFTAIGS--TGPTSGSLYIVDSFLVVTFGGAASLL 253

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +  +  +                         L ++ + +++++R   L   
Sbjct: 254 GTVASAFGIAQMQSISEFFLS-------------GSIARVLTLLTVVVILMLRPQGLFAS 300

Query: 343 RTPSN 347
           +    
Sbjct: 301 KVRRV 305


>gi|107026087|ref|YP_623598.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054]
 gi|116692729|ref|YP_838262.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
 gi|170738021|ref|YP_001779281.1| urea ABC transporter, permease protein UrtB [Burkholderia
           cenocepacia MC0-3]
 gi|105895461|gb|ABF78625.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116650729|gb|ABK11369.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia cenocepacia HI2424]
 gi|169820209|gb|ACA94791.1| urea ABC transporter, permease protein UrtB [Burkholderia
           cenocepacia MC0-3]
          Length = 305

 Score = 74.5 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 89/305 (29%), Gaps = 17/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++   GL+++ G +G++++       IGAY+  +           L PV    
Sbjct: 18  LSLFSVLLLMGLGLAVIFGQMGVINMAHGEFMTIGAYTVYLFSWFSQNVWHALTPVYFFF 77

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +      +   +       L     +       +L  W      +           +   
Sbjct: 78  AIVAAFALAFAAGWLAEWAL--IRHLYKRPLDTLLATWGLSLGMQQVFRSTFGPKEVSPA 135

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P+  +   +   +V+     ++  ++L L R+      R    N+    +
Sbjct: 136 LPDWLMGSWEPTPGLDIPVSGMFVMGLALLMTGGLLLALYRSRWGLRVRATVANRPMANA 195

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     G+AGA F A     +         +    +V  GG  SL 
Sbjct: 196 AGINTRRTDRMTFAIGCGIAGVAGAAFTAIGS--TGPTSGSLYIVDSFLVVTFGGAASLL 253

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +  +  +                         L ++ + +++++R   L   
Sbjct: 254 GTVASAFGIAQMQSISEFFLS-------------GSIARVLTLLTVVVILMLRPQGLFAS 300

Query: 343 RTPSN 347
           +    
Sbjct: 301 KVRRV 305


>gi|328948224|ref|YP_004365561.1| ABC-type transporter, integral membrane subunit [Treponema
           succinifaciens DSM 2489]
 gi|328448548|gb|AEB14264.1| ABC-type transporter, integral membrane subunit [Treponema
           succinifaciens DSM 2489]
          Length = 560

 Score = 74.5 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/330 (11%), Positives = 83/330 (25%), Gaps = 25/330 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y  IL    V   L      G   S   I ++  Q    + +A G++ ++   G   L+ 
Sbjct: 229 YLAILVFFIVCIILAPLSGNGNLLSLPNIFTILEQSSTRMFYALGVAGLILLAG-TDLSV 287

Query: 71  VIAYAIGAYSYVI-------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
               A+GA    +       + + +G+  W    +   +     +   +        +  
Sbjct: 288 GRMVALGAVVTGLVLHPGQNIVTFFGMGPWDFTAIPMAVRVIMALFSSVFLCVLFSAFAG 347

Query: 124 IA-----TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           +                 LI +  +  G +G  V      +                 V 
Sbjct: 348 VFSARLKIHPFISTLATQLIIYGLLFFGTSGTPVGSIDSGIKDVFGGRWVLGVINGELVT 407

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
           +      +++              +T        +  N +A      ++    L  F ++
Sbjct: 408 FPK----LIIPAAIAIVVAWFIWNKTTFGKNMYAVGGNSEAASVSGISVFKVTLGVFIMA 463

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILI 292
             F G    F A   +            +  I+  ++      GG+  +        I  
Sbjct: 464 GIFYGFGAFFEAFKANA--SAGTGQGYELDAIAACVVGGISFNGGIGKIGGAVLGVIIFT 521

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            +      +        +            
Sbjct: 522 SLTYCLTFLGIDTNLQFVFKGFIIIAAVAL 551


>gi|332530620|ref|ZP_08406553.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
 gi|332039903|gb|EGI76296.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
          Length = 325

 Score = 74.5 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 108/294 (36%), Gaps = 8/294 (2%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
           PL   L L +         +  ++ I  +FA  L +V+G  G++SL     + +GAY+  
Sbjct: 18  PLFWLLALASPWYLSGHALLINEVAIVALFALSLDLVMGYAGVVSLGHAAFFGMGAYAAA 77

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +          + +     +S   G +  L  ++     L + T+ ++ I   +  K   
Sbjct: 78  LFAKHINPDPVMGLFFGIAVSTVLGALASLSIMRGTSLTLLMVTMGVALILMELANKLDW 137

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+            +  +   F     F +Y     +  L + F+   +     
Sbjct: 138 LTGGADGLQGV--------IMGPVHVPFVGRFEFDLYGQVAAWYSLAVLFVFFLLSRRFV 189

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           ++ +      +RDN+    ++   +       + +++   G AGA  A +    S ++F 
Sbjct: 190 QSPLGGTLMALRDNRLRAMAIGIPVTARLALIYTIAAGVAGAAGALLAQTTSFASVEVFA 249

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           F  +  ++ +V++GG   L       AI   + +    +   Y+   +      
Sbjct: 250 FDRSADLVLLVVIGGAGWLYGGVIGAAIFKVLQDWISSITPQYWTFWIGLFLVV 303


>gi|90019877|ref|YP_525704.1| ABC-type branched-chain amino acid transport system permease-like
           protein [Saccharophagus degradans 2-40]
 gi|89949477|gb|ABD79492.1| inner-membrane translocator [Saccharophagus degradans 2-40]
          Length = 432

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 51/326 (15%), Positives = 99/326 (30%), Gaps = 19/326 (5%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
               + V    +L           Y  ++  + L Y + A  L +V G  G+LSL     
Sbjct: 24  FALTVLVPLSNILMPEGSFLHVPTYTMTLIGKYLCYALLALALDLVWGYCGILSLGHGAF 83

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +A+G Y+  +   R      +                 LP      D    A L++  + 
Sbjct: 84  FALGGYAMGMYLMRQIGDRGMYGNAELPDFMVFLNWQELPWYWMGFDNFGFAMLMVLLVP 143

Query: 134 QNILIKWKPITNGK-------------------AGIYVADRLYFLGTTVRSLIRFFRFPS 174
             +   +  +                          ++ D  +     +        F  
Sbjct: 144 GLLAFVFGWLAFRSRVTGVYLSIITQAMTYALMQAFFLNDFGFGGNNGLTDFKDILGFDI 203

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                 I ++ +  G    +  +  ++  +       +IRD +     L   +   KL  
Sbjct: 204 QANATRITLFMLSGGAVICAYLLCRFITTSKFGRVLVSIRDAESRSRFLGYRVEHYKLFV 263

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F +S+   G+AGA F      I+P  F    +I ++  V LGG  +L        ++  V
Sbjct: 264 FVLSAVLAGIAGALFVPQVGIINPGEFNPVNSIEIVIWVALGGRGTLYGAVIGAVVVNYV 323

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRH 320
                G     +  +L      +  +
Sbjct: 324 KSFYTGAMPEMWLFMLGGIFVVSTIY 349


>gi|315221925|ref|ZP_07863836.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Streptococcus anginosus F0211]
 gi|315188891|gb|EFU22595.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Streptococcus anginosus F0211]
          Length = 289

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 106/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L +   L+ +L + +
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFMGYFLINSLHLNFFLALIL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +   +   IA LI +      L        G            
Sbjct: 65  AMIGTAVLGVLVEFLAYRPLRNSTRIAALITAIGVSFFLEYVMVYFVGANTRS------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I   R+    +        +L+    L   + + +++T +  A R +  +  
Sbjct: 118 ----FPQVIETVRYNFGPISLTNIQLMILVISLILMVLLQVIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GMTPGLKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++L+R   
Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILILILLVRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|332559764|ref|ZP_08414086.1| branched chain amino acid ABC transporter inner membrane protein
           [Rhodobacter sphaeroides WS8N]
 gi|332277476|gb|EGJ22791.1| branched chain amino acid ABC transporter inner membrane protein
           [Rhodobacter sphaeroides WS8N]
          Length = 308

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 63/320 (19%), Positives = 113/320 (35%), Gaps = 28/320 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +LA+   +L  +         Y  +   +IL+   +A G +I  G  GLLSL   + +A 
Sbjct: 1   MLALHLAVLAGIAALQFVLPAYHHTNAARILVLATYAIGFNIAFGYTGLLSLGHALFFAG 60

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G Y+  +L  + G   W  +    +  G     +GL +L+  G    I TL+ ++ F   
Sbjct: 61  GMYATGLLVDQGGWQPWAALLAGPVAGGVLAACVGLLALRTAGPAFMIVTLMFAQAFHLA 120

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           ++ W   T G  G                     R     +      Y     +   +  
Sbjct: 121 ILYWGRFTGGDEG-------------FTLSGAARRIGPFDLADPATRYGAAFLLFAAALL 167

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
             L L R+        +R+N++    L      AKL A A+S    G AGA +      +
Sbjct: 168 GCLALVRSRTGRVLIAVRENEERTRMLGYDTFRAKLLALALSGLLSGAAGATYGLMFGYV 227

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
                    +I+ +  V+LGG  ++      TA+L  +++    +               
Sbjct: 228 GGSFAAIQYSILPLIWVLLGGAGTVLGPLLGTALLFYLIDWASSI--------------- 272

Query: 317 NMRHTTLMVIALFLVILMRS 336
                 ++   L L++L   
Sbjct: 273 TTASQFVVGAVLILLVLFAP 292


>gi|317123162|ref|YP_004103165.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Thermaerobacter marianensis DSM 12885]
 gi|315593142|gb|ADU52438.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Thermaerobacter marianensis DSM 12885]
          Length = 301

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 90/305 (29%), Gaps = 16/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + +++      Y +GAY    + +        +   
Sbjct: 8   LINGIQLGAIYALIAVGYTMVYGVVKMINFAHGDVYMVGAYVAFAVTAAAAAGSVSVGQ- 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++     +                A   +    + + +      +      +      
Sbjct: 67  GLVLFAVGLVAAMAGCALLGALIERTAYRPLRGQPRLVALTTAIGVSLLLENLMQIIAGP 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +LI   +     V   +     LL    + A +   + RT +  A R +  +  
Sbjct: 127 NPRPFPALIPARQIDLGGVFLNVRFAVALLVALVMMAGLQYLVMRTRVGKAMRAVAFDLD 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +     + F + SA    AG     +  RI P M      +      +LGG+
Sbjct: 187 AARLMGINVNRIIAATFMLGSALAATAGVLVGVTYSRIDPFM-GILPGLKAFVAAVLGGI 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        I+         +      +              +  + L +V+L +   
Sbjct: 246 GNIPGAMVGGLIMGLAEVGVASIRSELTGA--------------VAFLILIVVLLFKPTG 291

Query: 339 LLRLR 343
           LL  R
Sbjct: 292 LLGER 296


>gi|300312953|ref|YP_003777045.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300075738|gb|ADJ65137.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 317

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 63/324 (19%), Positives = 133/324 (41%), Gaps = 29/324 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +  ++   LL   L      +Y   +  +ILI+ M A  L+ ++G  G++S    + +
Sbjct: 4   LFIPLLLVLALLLPLLAQASGMEYYIGVLTRILIFAMVAASLNFILGYGGMVSFGHAVFF 63

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY   I       S WL+  ++A+++   G+++G+ +L+ R  Y  + T+ ++++F 
Sbjct: 64  GLGAYVTAIASFHGVTSAWLIWLLAALVTALVGLVIGVIALRTRAVYFIMITMALAQLFY 123

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              + ++           A  L   G  +                    Y+V+L     S
Sbjct: 124 YFFVGFRYYGGDDGLQVTARPLLGFGLDMSGDN--------------AFYWVVLAWLAAS 169

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             ++  L  +    A   IR N++   ++    +  KL+AF +++   G+AG+    S  
Sbjct: 170 FILLQRLLASRFGLALNAIRQNERRAQAIGYPALRYKLAAFVIAAVIAGIAGSLIGMSNL 229

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             SP +  +S++ I++ +V LGG+          A  + + E+      Y+         
Sbjct: 230 FASPKLLHWSQSGILLVMVALGGVGYFYGGLLGAAAFLLLEEVLSTHFEYW--------- 280

Query: 315 SFNMRHTTLMVIALFLVILMRSHS 338
                    + + L LV+++    
Sbjct: 281 ------QIYVGLILLLVVMVAPRG 298


>gi|300088537|ref|YP_003759059.1| inner-membrane translocator [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299528270|gb|ADJ26738.1| inner-membrane translocator [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 294

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 98/302 (32%), Gaps = 20/302 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y++ A GL+++ G +   +       A+G +    +  + G  + +  PV
Sbjct: 7   ILNSAVTGSLYLIAAVGLTLLYGLVKFPNFAHAEFMAVGGFLGYFIAEQLGWPLPVAYPV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +G  G +      K   D      + +      +    +  T    G         
Sbjct: 67  AFLGAGIVGFLSYRGVFKPLADKAGTTIIHLMVASMALGFILRHTTGEIWGFS------- 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              ++   I +  +    +   +    +++    +   +   L RT I  A R    N +
Sbjct: 120 ---SLTFGIIWPIYEIGSLRISLHWIIIIVTAIAVGVGMHYLLTRTKIGKAIRATASNPR 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +         +  + +S+   G+AG F A          +         ++V+LGG+
Sbjct: 177 LALAAGIDTTRVLMITWFLSAGLAGIAGLFRAVETRITPYVGWDIILPT--FAVVVLGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S      A   +  +  +   +        L            +  I L +V++ R   
Sbjct: 235 GSFYGAMVAAFAIGLMENIGVVL--------LSEIGLSTQYRMAIPFIVLIIVLIFRPQG 286

Query: 339 LL 340
           L 
Sbjct: 287 LA 288


>gi|218441779|ref|YP_002380108.1| inner-membrane translocator [Cyanothece sp. PCC 7424]
 gi|218174507|gb|ACK73240.1| inner-membrane translocator [Cyanothece sp. PCC 7424]
          Length = 377

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 54/373 (14%), Positives = 108/373 (28%), Gaps = 67/373 (17%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC-------------------------- 70
           +Y+ S+   + IY +FA GL++  G  GL++                             
Sbjct: 3   QYLVSLITSVAIYALFALGLNLQWGFTGLINFGHVAFMTLGAYATAQLSLLGVPVIIAVG 62

Query: 71  -VIAYAIGAYSYVILGSRYGLSIWLLI--------------------PVSAMISGACGMI 109
             + +A      +   +      +L I                           G+ G+ 
Sbjct: 63  VGLFFAALLGLLIGTSTLRLREDYLAIVTIGVSELLRLVVNNEQWLNQYGQWREGSFGIQ 122

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
                L F+        +I       I  +W+              +          I  
Sbjct: 123 GYPLPLNFQPSPFISIVMIAILTLLAIWSEWQLWQAVSKQWKEGKEIKDKSYQPNQPISI 182

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLS-----------------ASIILWLRRTAISNAWRT 212
             +      + +F+Y   +                         ++ +L R+      + 
Sbjct: 183 IIWGIIATSFIVFVYVNGIIALSNYTYQAGLMLLSLLILGVIYGLLEFLVRSPWGRILKA 242

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           IR++++   +L   + + KL AF +  A  G+AG FFA     I P  F+         I
Sbjct: 243 IREDEEIPRALGKNVFWYKLQAFMLGGAIAGLAGTFFAWQITTIYPTNFEPLLTFYAWII 302

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           V+LGG  + +       I      L   +        L            ++ + L +++
Sbjct: 303 VVLGGAGNNAGTILGAIIFWAYDSLTRFILP---QVALLDSTQIGAFRIMVIGLILMVLM 359

Query: 333 LMRSHSLLRLRTP 345
           + R   +L  +  
Sbjct: 360 VWRPQGILGKKEE 372


>gi|159044067|ref|YP_001532861.1| hypothetical protein Dshi_1518 [Dinoroseobacter shibae DFL 12]
 gi|157911827|gb|ABV93260.1| hypothetical protein Dshi_1518 [Dinoroseobacter shibae DFL 12]
          Length = 336

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 85/312 (27%), Gaps = 19/312 (6%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW---------LLIPVS 99
             + A G++++ G L   +       A G  + ++    +              L +P  
Sbjct: 25  LALGALGVTLIYGILRFSNFAHGDTMAFGTMATILFTWAFQSIGISLGPLPTALLALPFG 84

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++GA  +       KF     A+  + +      + +    +                
Sbjct: 85  ILVTGALLVGTDRLVYKFYRQQKAVPVIFVIASLGVMFVTNALVRFIIGPDDQRFADGER 144

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                   R        +         ++    + A +  +L RT    + R   DN+  
Sbjct: 145 FIISAREFRNLTGLDEGLALRTTQGLTVVTAVIVVALLFWFLNRTRTGKSMRAFSDNEDL 204

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                       +  + + +A   +AG  +   +         F   + + +  I+GG+ 
Sbjct: 205 ALLSGINPERVVMVTWLIVAALATVAGTLYGLDKSF--KPFTYFQLLLPIFAAAIVGGLG 262

Query: 280 SLSKIAKATAILIG--------VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           S         ++            ++   +                     +    L +V
Sbjct: 263 SPLGAIAGGFVIAFSEVTITYAFKKVLEYLLPEALEPDGLVQLLSTDYKFAVSFAILIIV 322

Query: 332 ILMRSHSLLRLR 343
           +L +   L + +
Sbjct: 323 LLFKPTGLFKGK 334


>gi|317405152|gb|EFV85494.1| hypothetical protein HMPREF0005_04785 [Achromobacter xylosoxidans
           C54]
          Length = 424

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 111/326 (34%), Gaps = 26/326 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
              ++   +  L               +Q+LI  +FA   +++ G  G+LS      + +
Sbjct: 11  AGLLLIVCVAALCALPWLLPAGQLVAAVQMLIAALFACAFNLLAGQGGMLSFGHAAYFGV 70

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G ++ +   +  G +  L  P+  +  G  G++ GL +  F      +   +++     +
Sbjct: 71  GTFATIHAMNALGGAGLLPTPLMPLAGGVAGLLFGLVAGWFATMRAGVYFSMITLALAEL 130

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           L    P   G  G                              ++ +Y+++L    +S +
Sbjct: 131 LHALAPHLKGVFG-----------GEAGLSAMRMPAWGFTFGSDVEVYFLVLAWVLVSLA 179

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT +      +R+N      L       K   FA+S+ F G+AG   A + +  
Sbjct: 180 ALYGLTRTPLGRLTLGLRENANRLRYLGYRPHTLKTMVFALSAMFAGIAGGLQALNIEAG 239

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +  +F+   +   +    +GG+ +        +IL  + +    +   +           
Sbjct: 240 NYVLFEVKLSTDAVLFAYIGGVNAFLGPVLGASILTFLSQTLADITRSW----------- 288

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
                    I   LV+L     L+ L
Sbjct: 289 ----LLYQGILFVLVMLFVPDGLVGL 310


>gi|153955361|ref|YP_001396126.1| hypothetical protein CKL_2743 [Clostridium kluyveri DSM 555]
 gi|219855780|ref|YP_002472902.1| hypothetical protein CKR_2437 [Clostridium kluyveri NBRC 12016]
 gi|146348219|gb|EDK34755.1| LivH [Clostridium kluyveri DSM 555]
 gi|219569504|dbj|BAH07488.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 291

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 88/305 (28%), Gaps = 25/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++      Y  GA+   +            + +
Sbjct: 7   LVNGLALGGVYALIAIGYTMVYGIVKLMNFAHGDIYMAGAFFGFLAVKNLNSGFIPTLII 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + S   G+I+   + K   +   I   I S     +L     +  G            
Sbjct: 67  AMVGSALLGIIIEKIAYKPLRNSSRITLFITSMGISLLLENGFRVIFGPNPRP------- 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L++   +              LL    L   + + + RT +  A R    + +
Sbjct: 120 ----FPELLKVKLYKIGDFQINNLQIVTLLICFILVILLQIIVYRTKMGKAMRAASFDTE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA    AG     S  +I P M      +      ++GG+
Sbjct: 176 ATELMGINVNNTISLTFAIGSALAAAAGVLIGMSYPKIDPYM-GMIPGLKAFIAAVVGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        +L               +  + +     +                +   
Sbjct: 235 GLIPGAMVGGIVLGISEIFTKAFISTKLSDGIAYIILIIILI-------------FKPSG 281

Query: 339 LLRLR 343
           LL  +
Sbjct: 282 LLGKK 286


>gi|304394017|ref|ZP_07375940.1| ABC transporter ATP-binding protein [Ahrensia sp. R2A130]
 gi|303293457|gb|EFL87834.1| ABC transporter ATP-binding protein [Ahrensia sp. R2A130]
          Length = 359

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 63/331 (19%), Positives = 121/331 (36%), Gaps = 28/331 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A      L L + A  S   ++ +     +  M A  L  + G  G++SL  +   A+ 
Sbjct: 29  VAYWVVAALLLIMPAIASGFVLNQIFGWSFVLGMIALSLMFLGGYGGMVSLAQLTIAAVA 88

Query: 78  AYSYVIL------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
            Y   I           G   W+ +P++ +I+   G  +G  +++  G Y  + TL ++ 
Sbjct: 89  GYMVAIFGVSSIDAVSLGWPWWVAVPLALIIAVLFGTAIGALAVRTEGIYTIMITLAIAS 148

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            F     +   + NG +G          G   R+               I  YY+ L   
Sbjct: 149 AFFYFTRQNYVVFNGFSGFNGVFPPKLFGVDWRAD--------------IPFYYLSLFFA 194

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+   +L+L R     A + +RDN +   +L   +   +++A A ++   G+ G     
Sbjct: 195 TLAYLAVLYLSRAPFGLALQGVRDNPRRMAALGFNVNAHRVAAHAFAAFIAGIGGILLTW 254

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
              +ISP        I ++ I ++GG+           + + +      +      S  +
Sbjct: 255 QSSQISPGTAGTGPVIDILVIAVIGGLGRPIGPFIGAIVYVVLKTFAIDILTSLGLSGDR 314

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           F          L+ I+  L++      LL L
Sbjct: 315 F--------QLLVGISFLLIVFFSPDGLLGL 337


>gi|222478666|ref|YP_002564903.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239]
 gi|222451568|gb|ACM55833.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239]
          Length = 297

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 103/317 (32%), Gaps = 24/317 (7%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           +    L        +           + A GLS++ G LG+L+      Y +GAY  + +
Sbjct: 1   MSLPSLVPLIGIADVIIGLSLGSRLFLIAVGLSLIFGVLGVLNFAHGGFYMLGAYVTLAV 60

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            +    + WL +   A+  G  G  +   +++   D +      +   F  +L+  + + 
Sbjct: 61  VTNVVDNFWLAVVAGALAVGVVGAAIEFAAIRPLYDRVDADLDQLIVTFGFVLVIHEAVR 120

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                           +     +  F        +  +   V+     +  S+ L++ RT
Sbjct: 121 F--------IWGSGSYSIDPPDVFNFSVALGGSTFSAYRLVVIGLAVAVLVSLWLFITRT 172

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
              +  R    +++    L   +       F + S   G+ GA  +  +   +       
Sbjct: 173 YFGSLVRGTSSDREMASMLGVDVPRLYTGVFFLGSVLAGLGGALSSPLQS--TSPALGDQ 230

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
             I    +V++GG+ S+S       ++  +  L                   +     + 
Sbjct: 231 VIIDAFIVVVIGGLGSMSGAFVGAMLIGMMQSLGPQF--------------ISAGSIAIP 276

Query: 325 VIALFLVILMRSHSLLR 341
            +A+ +V+L R   L  
Sbjct: 277 FLAMVIVLLFRPEGLFG 293


>gi|332522542|ref|ZP_08398794.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus porcinus str. Jelinkova 176]
 gi|332313806|gb|EGJ26791.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus porcinus str. Jelinkova 176]
          Length = 289

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 110/303 (36%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      + +GA+    L + + L+I++ + +
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDLFMMGAFIGYYLINVFHLNIFVALLL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I+   GM++   + +       IA LI +     +L        G         L  
Sbjct: 65  TMVITACLGMLIEFLAYRPLRQSTRIAALITAIGVSFLLEYGMVYLVGAEARAFPQALKT 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +            +    V        +L+    L  S+   +++T +  A R +  +  
Sbjct: 125 VK-----------YSLGPVSISNVQIIILVVSLLLMISLQFVVKKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG       + I+P M   +  I      +LGG+
Sbjct: 174 AAQLMGINVNSTISFTFALGSALAGAAGVLIGLYYNSINPLM-GMTPGIKAFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +  +                  F+     ++   L L++L+R   
Sbjct: 233 GIIPGAALGGFMIGLIETI-------------SVSIGFSSYRDAIVYAVLILILLIRPAG 279

Query: 339 LLR 341
           LL 
Sbjct: 280 LLG 282


>gi|149010625|ref|ZP_01831996.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP19-BS75]
 gi|147765106|gb|EDK72035.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP19-BS75]
          Length = 289

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + ++ ++ + V
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +       IA LI +     +L        G            
Sbjct: 65  AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+  R+    +        +L     L   + + +++T +  A R +  +  
Sbjct: 115 -TRAFPQAIQTVRYDLGAISLTNVQLMILAISLILMILLQVIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 233 GIIPGAALGGFVIGLLETFATAF-------------EMSDFRDAIVYGILLLILIVRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|116515326|ref|YP_816147.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae D39]
 gi|225856426|ref|YP_002737937.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae P1031]
 gi|225858560|ref|YP_002740070.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae 70585]
 gi|225860724|ref|YP_002742233.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|237650407|ref|ZP_04524659.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae CCRI 1974]
 gi|237822480|ref|ZP_04598325.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae CCRI 1974M2]
 gi|298230939|ref|ZP_06964620.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae str. Canada MDR_19F]
 gi|298255820|ref|ZP_06979406.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae str. Canada MDR_19A]
 gi|298502535|ref|YP_003724475.1| branched chain amino acid ABC superfamily transporter membrane
           protein [Streptococcus pneumoniae TCH8431/19A]
 gi|116075902|gb|ABJ53622.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae D39]
 gi|225722026|gb|ACO17880.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae 70585]
 gi|225724867|gb|ACO20719.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae P1031]
 gi|225727605|gb|ACO23456.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298238130|gb|ADI69261.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus pneumoniae
           TCH8431/19A]
 gi|327390107|gb|EGE88450.1| branched-chain amino acid transport system / permease component
           family protein [Streptococcus pneumoniae GA04375]
          Length = 289

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + ++ ++ + V
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +       IA LI +     +L        G            
Sbjct: 65  AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+  R+    +        +L     L   + + +++T +  A R +  +  
Sbjct: 115 -TRAFPQAIQTVRYDLGPISLTNVQLMILGISLILMILLQVIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|218886578|ref|YP_002435899.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218757532|gb|ACL08431.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 295

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 87/306 (28%), Gaps = 26/306 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y  S      +Y + A G S++  + G+++       ++G      L    GL I    
Sbjct: 11  QYTLSGLTTGSVYALLALGYSLIFNATGIVNFTQGDFLSLGGLVLYSLLVSQGLPIVAAF 70

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P + ++    G ++    L+       I  + ++     ++        G          
Sbjct: 71  PATILVVALAGALVERVCLRPARSRQMIILIFITMAASTLMRGLMKEGWG---------- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
             L   +  L     F     +      +V+       A++  + R T    A R    +
Sbjct: 121 -KLPLALPPLSPEVPFRLLGAVLTPQNLWVMGMTLCGIAALAWFFRATVTGKAMRAAAAD 179

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    +   +      +FA + A   + G                    +   +  +LG
Sbjct: 180 PRTARLMGVEVERLTTLSFAFAGALGALGGMLITPITSL--SYDIGLMLGLKGFAAAVLG 237

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  S +       +L        G                +     L+   L LV+ +R 
Sbjct: 238 GYGSFAGAVAGGVLLGLFESYGAGY-------------VTSAYRDVLVFGLLILVLFVRP 284

Query: 337 HSLLRL 342
             L   
Sbjct: 285 QGLFGT 290


>gi|254239431|ref|ZP_04932753.1| branched-chain amino acid transport protein BraD [Pseudomonas
           aeruginosa 2192]
 gi|126192809|gb|EAZ56872.1| branched-chain amino acid transport protein BraD [Pseudomonas
           aeruginosa 2192]
          Length = 307

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 91/305 (29%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I  +   +     +P+
Sbjct: 11  LVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEMYMIGSYIAFIAITLLAMMGLDSVPL 70

Query: 99  SAMIS-GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             + +  A  ++                      I     I           +    +  
Sbjct: 71  MMLAAFAASIIVTSAFGYSIERVAYRPLRGGNRLIPLISAIGMSIFLQNAVMLSQDSKEK 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            + T +     F     + V+       + +    +   + L++ R+ +  A R   ++ 
Sbjct: 131 AIPTLLPGNFVFGESSMNGVVISYMQILIFVVTFLVMFGLTLFISRSRLGRACRACAEDL 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +A          I+     F   I   +  +LGG
Sbjct: 191 KMTNLLGINSNNIIALTFVIGAALAAVAAVLLGMQYGVIN-PGIGFLAGIKAFTAAVLGG 249

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L         +    +  ++ F               L LV+L R  
Sbjct: 250 IGSIPGAMLGGLLLGVAEAFGADVFGDQYKDVVAFG-------------LLILVLLFRPT 296

Query: 338 SLLRL 342
            +L  
Sbjct: 297 GILGR 301


>gi|330837053|ref|YP_004411694.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Spirochaeta coccoides DSM 17374]
 gi|329748956|gb|AEC02312.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Spirochaeta coccoides DSM 17374]
          Length = 306

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 86/303 (28%), Gaps = 14/303 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L  ++         GAY  + +         L    
Sbjct: 11  LMNGLTLGGIYALIALGYTMVYGILKFINFAHGDVLMAGAYIGLFIFDFLRGDSPLGAWT 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A    A  + MGL SL            +        L+    ++   +          
Sbjct: 71  VAAFFIAMVLSMGLTSLLGMVIERTAYKPLRKATRLAPLLSAIGVSFILSNTAAWMFGTQ 130

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V+       +L     +  ++ L++ +T +  A R    +Q+
Sbjct: 131 SRKYNYPFDN-TSIHLGGVVITPHQILILGVSLVMMLALKLFVDKTRMGKAMRATSLDQE 189

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       FA+ SA   + G   A                +      ++GG+
Sbjct: 190 TAQLMGINVNHIISMTFAIGSALAAVGGILIALDFKV--YASMGMMTGLKAFVAAVVGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++S       +L  +      +                    T+    L +++L+R   
Sbjct: 248 GNISGAMLGGVLLGLLETFGVAVLG-----------IPQGLKDTIAFGVLIIILLVRPEG 296

Query: 339 LLR 341
           LL 
Sbjct: 297 LLG 299


>gi|322376942|ref|ZP_08051435.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus sp. M334]
 gi|321282749|gb|EFX59756.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus sp. M334]
          Length = 292

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + ++ ++ + V
Sbjct: 8   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +       IA LI +     +L        G            
Sbjct: 68  AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+  R+    +        +L     L   + + +++T +  A R +  +  
Sbjct: 118 -TRAFPQAIQTVRYDLGPISLTNVQLMILAISLILMILLQVIVQKTKMGKAMRAVSVDSD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 177 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 236 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 282

Query: 339 LLR 341
           +L 
Sbjct: 283 ILG 285


>gi|332076029|gb|EGI86495.1| branched-chain amino acid transport system / permease component
           family protein [Streptococcus pneumoniae GA41301]
          Length = 289

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + ++ ++ + V
Sbjct: 5   LVNGLILGSVYALIALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +       IA LI +     +L        G            
Sbjct: 65  AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+  R+    +        +L     L   + + +++T +  A R +  +  
Sbjct: 115 -TRAFPQAIQTVRYDLGPISLTNVQLMILAISLILMILLQVIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|22299135|ref|NP_682382.1| branched-chain amino acid ABC transporter permease protein
           [Thermosynechococcus elongatus BP-1]
 gi|22295317|dbj|BAC09144.1| branched-chain amino acid ABC transporter permease protein
           [Thermosynechococcus elongatus BP-1]
          Length = 289

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 90/303 (29%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      I  + A GL++  G L L +         GAY  ++  +        +   
Sbjct: 9   FVNGLAVGSIIALAAVGLTLTFGILRLPNFAHGDFMTAGAYLTLVANATGLNIWLSMAIG 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +G   +   L     R       TLI+  I  + L++   I    +          
Sbjct: 69  GLGTAGLMLLSEKLLWQPMRDRRATSTTLIIISIGLSFLLRNAVILIWGSENQTYRLPVI 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V        V++      A++ L L+RT +  A R + D+  
Sbjct: 129 PA-----------LDVGGVKIIYSKVIVMILAVVAIATVHLILQRTKVGKAMRAVADDLD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   + +  L  + ++    G+AG  +             +   + + + VILGG+
Sbjct: 178 LARVSGIDVEWVVLCTWLLAGVLTGVAGGLYG--LITAVRPTMGWFLILPLFASVILGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +         I+    E+   M    +   +                 +  V+L+R   
Sbjct: 236 GNPYGAIAGALIIGVAQEMSTRMIPAEYKLAVALG-------------MMMAVLLVRPQG 282

Query: 339 LLR 341
           L R
Sbjct: 283 LFR 285


>gi|256830970|ref|YP_003159698.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
 gi|256580146|gb|ACU91282.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
          Length = 301

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 98/305 (32%), Gaps = 16/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L L++      + IGAY  + L    GL   +    
Sbjct: 8   LTNGLAVGGIYALIALGYTMVYGVLKLINFAHGDLFTIGAYLGLTLLVSMGLFDKIGPLP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++     MI+                     +  + ++     +       +A     
Sbjct: 68  AVILLAVMVMILVAIIGAILERVAYRPLRQSPRL--SAVVSALGASIFFQNAIMAIYSPK 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  ++         +   I    +      L A++  ++++T I  A R    +Q 
Sbjct: 126 FLVYPHDILPKAAVNILGLDIPIMRIIMFSTSLVLMAALYFFIQKTKIGTAIRAAAIDQG 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    +  F +  A  G AG        +I+  M  +   +   +  ILGG+
Sbjct: 186 AAKLMGINVDRVIMLVFCIGPALGGAAGLMVGLYYGQINFSM-GWIFGLKAFTAAILGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L  +  L        +   + F               L L++++R   
Sbjct: 245 GNIPGAMVGGLLLGVIEALGAAYISIAWKDAIAFC-------------VLILILIVRPTG 291

Query: 339 LLRLR 343
           LL  R
Sbjct: 292 LLGER 296


>gi|170738935|ref|YP_001767590.1| urea ABC transporter permease protein UrtC [Methylobacterium sp.
           4-46]
 gi|168193209|gb|ACA15156.1| urea ABC transporter, permease protein UrtC [Methylobacterium sp.
           4-46]
          Length = 384

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 54/355 (15%), Positives = 106/355 (29%), Gaps = 36/355 (10%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           N + K +   ++     L L +       +  ++  + L Y   A GL I  G  G+LSL
Sbjct: 9   NAFMKPMEWASLAVLAALILVVLPLALDIFRLNLVGKYLTYAFVALGLVICWGYCGILSL 68

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL- 127
              + + +G Y   +       S+      S            + +L +         L 
Sbjct: 69  GQGVFFGLGGYCMAMYLKLEASSVENTKIQSTPGIPDFMDWNQVTALPWFWKPFHSLPLT 128

Query: 128 ----IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT-----------------VRSL 166
               +       ++I          G Y A     +                    +  L
Sbjct: 129 LLAVVAVPTLFALVISAAMFKRRVGGTYFAIITQAIAAILTILIVGQQGYTGGINGITDL 188

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                +       +  +Y+V  G+         +++R+ +      +RD +        +
Sbjct: 189 RTLHGWDIRTDHAKTVLYFVNGGLLIACILAAQYVKRSKLGRILVAMRDKEDRVRFSGYS 248

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +   K+ AF +++AF  + GA F      +SP       +I ++    +GG  SL     
Sbjct: 249 VASFKIFAFCLAAAFAAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYTAVGGRLSLFGAVY 308

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            T ++                    F  SF       +      V+L   + L  
Sbjct: 309 GTLLVNWAKT--------------SFSESFPELWLFGLGALFIGVVLAFPNGLAG 349


>gi|311106562|ref|YP_003979415.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310761251|gb|ADP16700.1| inner-membrane translocator 39 [Achromobacter xylosoxidans A8]
          Length = 329

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 66/327 (20%), Positives = 132/327 (40%), Gaps = 26/327 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             + A     +L   +       +   + +  +++       ++V G LG +S    +  
Sbjct: 17  WPVAAAAVAAILMALVPLVVKDAFTLQVLLLAIMFGALGACWNLVGGFLGRISFGHSVFV 76

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G Y+ ++L     L+  L IP+  +IS A   ++G P+L+  G Y A+AT+ + +I  
Sbjct: 77  GVGGYTTLLLLHHLKLTPLLGIPLGGVISAALAWLVGGPTLRLSGHYFAMATIALLQIGL 136

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++I W+                ++                    ++  Y++ +G+ FL+
Sbjct: 137 LLMINWEWAGGAVGLEAPIGDAAWMLLFRS---------------KVPYYWIAVGLAFLT 181

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                +L  +     WR I  ++ A  SL       K+ AF +S+   G+ G FFA    
Sbjct: 182 FCATFFLVHSKTGFYWRAINGDEAASRSLGVPADRYKMLAFVMSAGMTGVWGGFFAMYVG 241

Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
            I P+ MF  + ++ V+ + ILGG+ +L       A+L+ + E    +          + 
Sbjct: 242 FIDPESMFNLTMSVQVVLVTILGGVGTLIGPWLGAAVLLPLSEGTRVL----------WG 291

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLL 340
            S       +  +A+ LV +     L+
Sbjct: 292 SSGMGLDLLVFGLAILLVTMFLPGGLV 318


>gi|28971618|dbj|BAC65301.1| membrane spanning protein [Pseudomonas fluorescens]
          Length = 317

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 71/315 (22%), Positives = 132/315 (41%), Gaps = 29/315 (9%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
            +L +   Q +  +   +I+I+ + A  L++V+G  GL++      + IGAY+  IL   
Sbjct: 25  PWLASIFDQSFYMTFATRIMIFALAATSLNLVLGFGGLVAFGHAGFFGIGAYTIAILMEM 84

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
              S W+  P +  IS  C +I+GL SL+ RG Y  + TL  +++   I         G 
Sbjct: 85  GTSSAWIAWPAAVAISAGCALIIGLVSLRTRGVYFIMITLSFAQMLYYIFQSLTAF-GGD 143

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
            G+ +  R                     +  ++  YYV+L +  +    +         
Sbjct: 144 DGMSLPGRST-------------LALGPDLSSDVSFYYVVLLISVVVMFAMQRAVNARFG 190

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
              ++IR+N+    S+   +   KL AF +S A  G+AGA  A     ISP++  ++++ 
Sbjct: 191 RVLQSIRENESRMESIGYPVFRYKLVAFTLSGALAGLAGALVANQNGFISPNLMLWTQSG 250

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            ++ +VI+GG+  L       A+L+ + E       ++                  + I 
Sbjct: 251 TLMVMVIMGGVGYLYGGVFGAALLLILEETLSNYTIHW---------------QLPLGII 295

Query: 328 LFLVILMRSHSLLRL 342
           L +V+L     +  L
Sbjct: 296 LLVVVLFAQTGIAGL 310


>gi|320528027|ref|ZP_08029193.1| amino acid or sugar ABC transport system, permease protein
           [Solobacterium moorei F0204]
 gi|320131653|gb|EFW24217.1| amino acid or sugar ABC transport system, permease protein
           [Solobacterium moorei F0204]
          Length = 560

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/322 (9%), Positives = 84/322 (26%), Gaps = 12/322 (3%)

Query: 10  KYDKILCLLAVVYPLLLFLFL---GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +    L ++ V   L +   +       +   I ++  Q    +  A G++ V+   G  
Sbjct: 233 RNGLYLVIILVFIGLGIVTPIIKKTPLFTVNNILNILQQASPRMFLALGVAGVIMLAG-T 291

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+      +G  +  I+  +   +    +           + +           L    
Sbjct: 292 DLSIGRMVGMGMVASTIIMHKGINTG--AVFGKVFDFTNLPIGLRAVMALVVCIILCTIF 349

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
             ++  F+        I++    + +   + +    V         P+  +        +
Sbjct: 350 TSIAGFFKAKYKMHPFISSMSNMLIIFGMVTYATKGVSFGAIENDIPAMIIPKIGNFPTI 409

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L        +     +T        +  N +A       +    + AF ++    G   
Sbjct: 410 ILWAAVAVMIVWFIWNKTTFGKNLYAVGGNPEAAAVSGIDVFRVTIMAFVMAGVLYGFGA 469

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCG 300
                         +    ++  I+  ++      GG+  +S +     I   +      
Sbjct: 470 WLECNRMVGSGSAAYGQGWDMDAIAACVVGGVSFSGGIGKISGVVVGVTIFTALTYSLTI 529

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +        +          T 
Sbjct: 530 LGIDTNLQFVFEGLIILAAVTL 551


>gi|316934614|ref|YP_004109596.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315602328|gb|ADU44863.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 722

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 91/305 (29%), Gaps = 23/305 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L ++  +   L +    S   +  +          A  ++I V   G + L+    +A+ 
Sbjct: 34  LLILVFVGFLLTIPGYTSLPQLQQLMRSFAEQGFVAMAMAISV-LSGGIDLSVGAVFAMA 92

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            +  + L       + L I          G + G      +                 +L
Sbjct: 93  DFLTLYLLMVREWPLPLAIVAVLAWGALIGAVNGGLIAYAKTRPFLTTM--------VVL 144

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I  +   N   G+Y  D       +         +     I  +F+  V L         
Sbjct: 145 IILRAAYNKLTGLYAIDLASASSDSEAWDYLGTGYLFGIPINMVFLIVVGLIG------- 197

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L+L R         +  ++KA       +  +   A+ ++      AG  +AA ++   
Sbjct: 198 HLYLTRIRSGVHIMAVGSSRKAARHAGIDVKRSLFLAYVLAGMLASFAGILYAARQNTAG 257

Query: 258 PDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            D       +  ++  +LGG+       ++S+     AI+  ++     +  +   +   
Sbjct: 258 TDT-GVGWEVNALAATVLGGISLSGGRGTISRALMGAAIIFLLINGLVQLGTHGSLTTAT 316

Query: 312 FDCSF 316
                
Sbjct: 317 IGLIL 321


>gi|168490837|ref|ZP_02714980.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae CDC0288-04]
 gi|183574713|gb|EDT95241.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH (LIV-I protein H) [Streptococcus
           pneumoniae CDC0288-04]
          Length = 289

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + ++ ++ + V
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +       IA LI +     +L        G            
Sbjct: 65  AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+  R+    +        +L     L   + + +++T +  A R +  +  
Sbjct: 115 -TRAFPQAIQTVRYDLGPISLTNVQLMILAISLILMILLQVIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 174 AAQLMGNNVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|83593086|ref|YP_426838.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
 gi|83576000|gb|ABC22551.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
          Length = 304

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 87/304 (28%), Gaps = 15/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G +G+++      Y IGA+  VI     G   +  +P+
Sbjct: 8   LINGLTLGAIYGLIAIGYTMVYGIIGMINFAHGEIYMIGAFLTVICFVLLGGPEFASVPL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLI-MSEIFQNILIKWKPITNGKAGIYVADRLY 157
           + ++     M+                             I           I    R+ 
Sbjct: 68  ALLLILVVSMVFTAAYGWTVERLAYRPLRGSFRLAPLISAIGMSIALQNYVQITQGARVK 127

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   +R     F      V       ++ +    L       + +T++    R    ++
Sbjct: 128 PIQPVIRGGFEVFNQGGFAVQISYLQIFIWILTIGLMMGFTYVITQTSMGRQQRACEQDR 187

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    +   +       F + +    +AG         I      F   +   +  +LGG
Sbjct: 188 KMASLIGVNVDRTISLTFVIGALLAAVAGLITTLYYGVIDFY-IGFLAGMKAFTAAVLGG 246

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + SL        ++  +           +  +  F               L LV++ +  
Sbjct: 247 IGSLPGAMLGGLLIGLIEAFWSAYFTIEYKDVATFG-------------ILVLVLIFKPT 293

Query: 338 SLLR 341
             L 
Sbjct: 294 GFLG 297


>gi|238027294|ref|YP_002911525.1| inner-membrane translocator [Burkholderia glumae BGR1]
 gi|237876488|gb|ACR28821.1| Inner-membrane translocator [Burkholderia glumae BGR1]
          Length = 327

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 106/301 (35%), Gaps = 23/301 (7%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            ++   + +    A   + V+   G  S      +AIGAY+        G  +   + V+
Sbjct: 1   MTLVTNLGLLSFLALS-AYVLAIAGDFSFGQQALFAIGAYAGASATVLGGWPLGAALAVA 59

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           A      G ++   +L+  G   ++A L  +E  + +L+  +    G  G  +       
Sbjct: 60  AAAGALAGWLLRAATLRLSGLRFSLAMLAAAETIRQLLLLIRVQRPGPDGEPIGPGGDEG 119

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +       R+     +    +  ++     L    +    RT    AWR + ++   
Sbjct: 120 FAGI-------RYVFEHGMTPAQVALMVWAALGLVLVALAGFERTRRGRAWRMVGEDPAL 172

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L      AKL+A  ++ A   + GA +A     I PD F     I  +S  ++GG+ 
Sbjct: 173 AAALGIDARRAKLAAATLAGAVAALGGALYAHCSTYIEPDNFDVMIGIHGLSYALIGGLG 232

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S        A+ +G++E     + Y                       +  ++++R   L
Sbjct: 233 SPFGPLLGVALDLGLLEGTRFFHGY---------------RMIAFGGLVAGLLVVRPRGL 277

Query: 340 L 340
           +
Sbjct: 278 V 278


>gi|319794220|ref|YP_004155860.1| urea ABC transporter permease urtb [Variovorax paradoxus EPS]
 gi|315596683|gb|ADU37749.1| urea ABC transporter, permease protein UrtB [Variovorax paradoxus
           EPS]
          Length = 304

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 87/301 (28%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++   GL+I+ G +G++++       IGAYS  +            +P    I
Sbjct: 18  LSLFAVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYSIYLAAQVTERMAPAFMPYYFPI 77

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     +            L     +       +L  W      +           +  T
Sbjct: 78  AIGLAFVFAFIVGWIVEWVL--IRHLYKRPLDTLLATWGVSLGLQQIFRTFIGPKEVSPT 135

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   I     P   +   I   +VL     ++  +++ L ++      R    N+    +
Sbjct: 136 LPEWIMGSWTPHEGLDIPINGLFVLALTGLVTCGVLIALHKSRWGLRVRATVANRTMANA 195

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     GMAGA  A +    +         +    +V  GG  SL 
Sbjct: 196 TGIDTKKTDRLTFAIGCGIAGMAGA--AFTTIGSTGPTSGSLYIVDAFLVVTFGGAASLL 253

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     +           +L                 + L+++MR   L  +
Sbjct: 254 GTVVSAFGIAQTQSISEFFMTGSMAKVLTLS-------------LIVLILMMRPQGLFAV 300

Query: 343 R 343
           +
Sbjct: 301 K 301


>gi|291296497|ref|YP_003507895.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
 gi|290471456|gb|ADD28875.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
          Length = 306

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 110/318 (34%), Gaps = 15/318 (4%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +  +   + + +     L+  + A GL++V+G +  ++L     Y IGAY          
Sbjct: 1   MPPSLFIEQVLNGFQFGLMLFLLAAGLTLVLGIMDTINLAHGSLYMIGAYLTA-TLVGVT 59

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
            S WL +  + + +   GM++ L  L+       ++ ++ +     I+ +   +  G   
Sbjct: 60  GSFWLAVLGAVLGTALIGMLLELSVLRQLYRRDHLSQVLATFALILIINEVVRMIWGSQ- 118

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                    L  +    +         + Y  F   ++     ++  +   + RT +   
Sbjct: 119 --------PLLLSAPEALSGPVEILPGLYYPAFRLVIIGVGLLVALLLFWLVNRTRVGMW 170

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    N++   ++   I       F V +    +AGAF               S  I+ 
Sbjct: 171 LRAGASNREMAQAMGVPIKPLFTLLFGVGAGLCAIAGAFLGPILAV--QIGMGESILILA 228

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVI 326
             ++++GG+ S+        ++  V            + +   + +        + L+ +
Sbjct: 229 FVVIVIGGIGSIKGALVGALLVGLVDTAGRAFLPLLLSRVAPPEVASNLGPALASILIYL 288

Query: 327 ALFLVILMRSHSLLRLRT 344
            + +V+  R   L   RT
Sbjct: 289 LMAVVLFFRPQGLFPART 306


>gi|153814398|ref|ZP_01967066.1| hypothetical protein RUMTOR_00608 [Ruminococcus torques ATCC 27756]
 gi|317500108|ref|ZP_07958343.1| galactoside ABC transporter [Lachnospiraceae bacterium 8_1_57FAA]
 gi|145848794|gb|EDK25712.1| hypothetical protein RUMTOR_00608 [Ruminococcus torques ATCC 27756]
 gi|316898593|gb|EFV20629.1| galactoside ABC transporter [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 554

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/318 (8%), Positives = 86/318 (27%), Gaps = 9/318 (2%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y  IL +  V+  +   +      +   + ++  Q    +  A G++ ++   G   L+ 
Sbjct: 231 YIAILLIFIVLCIITPMIKGAPLLTYNNVLNVLQQASPKMFLALGVAGLILLAG-TDLSI 289

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +G  +  I+  +   +    +        +  +I+ +         L     +++
Sbjct: 290 GRMVGMGMTTATIIMHQGINTG--GVFGHIFDFTSTPIIVRVILSLVICILLCTFFTMIA 347

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             F         I+     + +   + +    V         P+  +        +++  
Sbjct: 348 GFFTAKFKMHPFISTMANMLVIFGLVTYATKGVSFGAIEPTIPNMIIPKINGFPTIIIWA 407

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 +     +T        +  N +A      ++    + AF ++    G       
Sbjct: 408 AAAVFIVWFIWNKTTFGKNLYAVGGNAEAASVSGISVFAVTVGAFILAGILYGFGSWLEC 467

Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFY 304
                     +     +  I+  ++      GG+  +S +     I   +      +   
Sbjct: 468 IRMVGSGSAAYGQGWEMDAIAACVVGGVSFTGGIGKISGVVVGVFIFTALTYSLTILGID 527

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +       +    
Sbjct: 528 TNLQFVFSGIIILVAVAL 545


>gi|83950628|ref|ZP_00959361.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
 gi|83838527|gb|EAP77823.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
          Length = 308

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 95/306 (31%), Gaps = 21/306 (6%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           +   +  + A GLS+V G + ++++     + +GA    +L         +   V+ +++
Sbjct: 16  VTAAVLALTAVGLSLVFGVMRVVNIAHGEFFMLGAVIAYVLTRAISGHPAVGFAVALVVA 75

Query: 104 GACGMIMGLPSLKF---RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF-- 158
                ++ + +      R DY    T++ +     I+ +   ++ G     V        
Sbjct: 76  PVLVGVLAVVADMTILKRLDYDPERTIVATIGLLYIIQQLTLMSYGPDARPVEAPFNTRL 135

Query: 159 -LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L            +    +    +   V+     L   I   + RT I    R  + ++
Sbjct: 136 ALPWFEWGENGLAMYWPWGLSTTSYKLAVIGAAVVLLCGIWAMMARTRIGLVMRATQADR 195

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +    +       F + +    MA       +      +      ++   +VI+GG
Sbjct: 196 DMAQAFGIPVEKVYAMVFGIGAGLAAMAAVLIVPIQQA--HYLMGADPLLLSFIVVIIGG 253

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + SL     A  ++     +                         L  + + LV++ R  
Sbjct: 254 LGSLPGTVVAAILIGLSDGIISVFFSPTLAK-------------ILATLLVGLVLVFRPQ 300

Query: 338 SLLRLR 343
            L   R
Sbjct: 301 GLFGTR 306


>gi|111019121|ref|YP_702093.1| ABC branched amino acid transporter, permease component
           [Rhodococcus jostii RHA1]
 gi|110818651|gb|ABG93935.1| ABC branched amino acid transporter, permease component
           [Rhodococcus jostii RHA1]
          Length = 372

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 50/326 (15%), Positives = 98/326 (30%), Gaps = 29/326 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 +  S+  + L + + A G+ +  G  G+L+L   + + +GAY   +        
Sbjct: 27  PAVLSDFRLSLLGKFLCFAIVAVGIGLAWGRGGMLTLGQGVFFGLGAYMMAMHLKIADAE 86

Query: 92  I---------------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           +                L        S    ++  L         L +            
Sbjct: 87  LRGDTVPDFMQIAGIRELPGYWVPFTSPIVTILGILLIPALVAFVLGLGVFKRRVKGAYF 146

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            I  + +    A + V  +       +     FF F  +    +  ++++  G+     +
Sbjct: 147 AILSQALAAAFAILLVGQQSTGGSNGLNRFRTFFGFNLNDPANKQMLFFIAAGVLLAVVA 206

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           I   L  +        +RD ++    L       KL A+  ++ F G+AGA F      I
Sbjct: 207 ITRQLMNSRYGELLVAVRDQEERVRFLGYDPANIKLVAYVTAAFFAGLAGALFVPIVGII 266

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP       +I  +  V +GG ++L         +                    F  SF
Sbjct: 267 SPADVGIVPSIAFLIGVAIGGRSTLLGPVLGAIGVAWAQS--------------AFSESF 312

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
               T    +   +V+      +  L
Sbjct: 313 PSGWTYAQGLLFIVVVGFFPAGVAGL 338


>gi|306839476|ref|ZP_07472284.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. NF 2653]
 gi|306405421|gb|EFM61692.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. NF 2653]
          Length = 307

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 101/313 (32%), Gaps = 33/313 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89
           + +      IY + A G ++V G +G+++      + +GA+         +  I      
Sbjct: 13  VINGLALGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGAFMALIVFLIITTFIGMLPVA 72

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L + L++ V+ +++G     +   + +       +A LI +      L  +  +T G   
Sbjct: 73  LMLLLMMIVAMLLTGLWSWAIERVAYRPLRGSFRLAPLITAIGMSIALSNFVQVTQGPRN 132

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             V   L                  S V        V++    L       + RT++  A
Sbjct: 133 KPVPQLLNGSYELF----------GSGVTISFKQIVVIVVTAILLTIFWYVVNRTSLGRA 182

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +    +AG  + +    IS     F   +  
Sbjct: 183 QRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKA 241

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  +  L        +  +  F               L 
Sbjct: 242 FTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS-------------ILA 288

Query: 330 LVILMRSHSLLRL 342
           +V++     +L  
Sbjct: 289 IVLIFMPSGILGR 301


>gi|90423133|ref|YP_531503.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90105147|gb|ABD87184.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 304

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 88/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   IY + A G ++V G +G+++      + IG +  +I            +PV
Sbjct: 8   LINGIVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLILVSLGLTFVPV 67

Query: 99  SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             +I     M +                            I    +    + +    R+ 
Sbjct: 68  ILLIVLLVSMAITALYGWTVERIAYRPLRHSFRLAPMLSAIGMSFVLMNYSQVAQGARVK 127

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   +      +      V        V++    L A     + +T +    R    +Q
Sbjct: 128 PVPPIITGGYTLYEADGFVVRLSNIQIIVVITTVVLLAIFTWLVAKTRLGRDMRACEQDQ 187

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                L   +       F + +A   +AG  +      +   M  F   I   +  +LGG
Sbjct: 188 TMAALLGVDVDRTISMTFVIGAALAAVAGMMYLLYYGLVDFFM-GFVAGIKAFTAAVLGG 246

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + SL        ++  +  L        +  +  F               L +V++    
Sbjct: 247 IGSLPGAMLGGLLIGLIETLWSAYFSVEYKDVAAFS-------------ILIIVLIFLPT 293

Query: 338 SLLRL 342
            LL  
Sbjct: 294 GLLGR 298


>gi|22298093|ref|NP_681340.1| branched-chain amino acid ABC transporter permease protein
           [Thermosynechococcus elongatus BP-1]
 gi|22294271|dbj|BAC08102.1| branched-chain amino acid ABC transporter permease protein
           [Thermosynechococcus elongatus BP-1]
          Length = 314

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 61/306 (19%), Positives = 115/306 (37%), Gaps = 31/306 (10%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGLSIW 93
           + + + +  M A  L + +   G LSL     YAIG Y   +L +             + 
Sbjct: 11  LLVSMTLGAMLALSLYLPL-MSGQLSLASPAFYAIGGYIAALLSTRVFAGLNPYPLPLVL 69

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + V+A++ G  G  +G+P L+ RG Y AIAT+  SE+ + + +  + +T G  GI+  
Sbjct: 70  GEMVVAALVCGLLGWGLGVPVLRLRGIYFAIATIAFSEVLRVLALNLE-VTGGAVGIFGI 128

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            + +                       +   ++ L +  L A  I  L +T    A + I
Sbjct: 129 PQPF--------------------STPLGYLWLTLPLLILVAIAIGRLEQTRAGKAMQAI 168

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R ++    +L       K+  FA+ +   G+AG   A   +  +P    F   ++ ++ V
Sbjct: 169 RGDELVAQTLGIDTTRYKVLGFALGAILAGVAGVLAAHLLNTWNPRQGTFDTGVLALTAV 228

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ++GG  +         +   + EL  G+    +                L  + + L   
Sbjct: 229 LVGGNRTFVGAIAGGMLFTALPELLRGLADQAYL-PPAVANFCRDGRLMLYGLLIILGTR 287

Query: 334 MRSHSL 339
                L
Sbjct: 288 FFPRGL 293


>gi|54027230|ref|YP_121472.1| putative branched-chain amino acid transporter [Nocardia farcinica
           IFM 10152]
 gi|54018738|dbj|BAD60108.1| putative branched-chain amino acid transporter [Nocardia farcinica
           IFM 10152]
          Length = 380

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 104/356 (29%), Gaps = 29/356 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+       +   +  L       +L   +       +  ++  + L + + A G+ +  
Sbjct: 1   MTTLIGSWRERSSLTALAGFAVAAILLFAVAPAVLSDFRLNLLAKFLCFAIVAAGIGLAW 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW---------------LLIPVSAMISGA 105
           G  G+L+L   + + IGAY   +       +                 L        S  
Sbjct: 61  GRGGMLTLGQGVFFGIGAYIMAMHLQMADAARLGNDVPEFMEIAGIRELPTFWQPFASAP 120

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
             ++  L         L               I  + +    A +    +     T +  
Sbjct: 121 VAILAILVLPALVAAVLGYGVFKRRVKGAYFAILSQALAAALAILLTGQQALGGFTGLSD 180

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
              FF F  S       ++++  G   +  +I+  L  +        +RD ++    L  
Sbjct: 181 FRAFFGFKLSDPANRRMLFFLAAGALLVVVAIVRQLMHSRYGELLVAVRDQEERVRFLGY 240

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                K+ A+ V++ F G+AGA F      ISP       +I  +  V +GG T+L    
Sbjct: 241 DPADIKIVAYVVAAFFAGIAGALFTPIVGIISPADIGVVPSIAFLIGVAIGGRTTLLGPV 300

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                +                        F    T L  +   +V+      L  
Sbjct: 301 LGAIGVAWAQTTLSE--------------QFPSGWTYLQGVLFIVVVGFIPAGLAG 342


>gi|303255835|ref|ZP_07341876.1| branched-chain amino acid transport system permease protein
           [Streptococcus pneumoniae BS455]
 gi|301801597|emb|CBW34295.1| branched-chain amino acid transport system permease protein
           [Streptococcus pneumoniae INV200]
 gi|302597219|gb|EFL64324.1| branched-chain amino acid transport system permease protein
           [Streptococcus pneumoniae BS455]
          Length = 289

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + ++ ++ + V
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +       IA LI +     +L        G            
Sbjct: 65  AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGISFLLEYGMVYLVGAN---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+  R+    +        +L     L   + + +++T +  A R +  +  
Sbjct: 115 -TRAFPQAIQTVRYDLGPISLTNVQLMILGISLILMILLQVIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|158337392|ref|YP_001518567.1| branched-chain amino acid ABC transporter permease [Acaryochloris
           marina MBIC11017]
 gi|158307633|gb|ABW29250.1| branched-chain amino acid ABC transporter permease protein
           [Acaryochloris marina MBIC11017]
          Length = 478

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 83/271 (30%), Gaps = 4/271 (1%)

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           YV+         W    +S  I     +   +  +        +  + +  ++ +     
Sbjct: 211 YVLCLVGVAACWWFSFSLSLTIELPSALQEIVLLMMRFAMVAPLGIVGVILVYASCRQPL 270

Query: 141 KPITNGKAG-IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           + +     G       +      V               Y+  + ++L+    L    + 
Sbjct: 271 QQLRTQSMGTHLSLLAVSMGMGLVVMFFGVHIMGIIDYTYKAGLLWLLILTIALVFWQLE 330

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
               +       +IR++++   +L   +   KL +F +  A  G+AG+F+A     I+PD
Sbjct: 331 RWVNSPWGRVLTSIREDEEVAKALGKNVFRYKLQSFMLGGAIAGIAGSFYAWQLTFINPD 390

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F          I++ GG  +         I     E+   +           D      
Sbjct: 391 GFIPLLTFQAWIIIVAGGAGNNVGTLLGAGIFWAYNEVTRFILPNILPLD---DARLGAF 447

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              ++ + L ++++ R   LL  +       
Sbjct: 448 RVMVIGLMLIVLMMWRPQGLLGKKEELTLGR 478



 Score = 43.7 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 25/43 (58%)

Query: 38 YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
          Y  S+ +   IY +F+ GL++  G  GL++   +   AIGAY+
Sbjct: 5  YFVSLALFTTIYALFSLGLNLQWGYTGLINFGHIAFMAIGAYT 47


>gi|328951562|ref|YP_004368897.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451886|gb|AEB12787.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
          Length = 288

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 58/311 (18%), Positives = 100/311 (32%), Gaps = 25/311 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                           +Y + A GL++V G L +L +     YA+GAY   +  S     
Sbjct: 3   WVTFGYLAVDGLAVGSVYALTALGLTLVYGLLRVLHVAHAGVYAVGAYGGWLAYSATEHL 62

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            + L   +   +     +         G    I  +    +F               G  
Sbjct: 63  GFALAAGALAATLFGLFLEWWFYRPLAGKPPLIPLIGSIGLFL------------ATGDL 110

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           +         ++ +L          V        VLLG   L   +     RT +  AWR
Sbjct: 111 LRILFGPYQQSLPALEPRPVLFLGAVGVTAPQVAVLLGTALLLLGVYGVTARTRLGLAWR 170

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +  + +   +L          AFA++SA  G+AG       +++ P M         ++
Sbjct: 171 ALAQDLEVASALGIHPPRHTALAFALASALAGVAGVLIGVYYNQVYPTMGDVPAY-KALA 229

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +V+LGG+ S+     A  +L  V  L        F                +  +AL +V
Sbjct: 230 VVVLGGLGSVWGTVAAGVLLGLVESLALAFLGNAFPPEG------------VAFLALIVV 277

Query: 332 ILMRSHSLLRL 342
           +L+R   L   
Sbjct: 278 LLVRPQGLFGR 288


>gi|291454670|ref|ZP_06594060.1| branched-chain amino acid ABC transporter permease [Streptomyces
           albus J1074]
 gi|291357619|gb|EFE84521.1| branched-chain amino acid ABC transporter permease [Streptomyces
           albus J1074]
          Length = 364

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/343 (13%), Positives = 95/343 (27%), Gaps = 29/343 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L A     +L   +       +   +  + L   + A G+ +  G  GLL+L   + + +
Sbjct: 11  LAAFALGAVLLFAVAPLALTDFRLGLLAKYLCTAIVAVGVCLAWGRGGLLTLGQGVFFGL 70

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS------ 130
           G Y+  +           L     +      +             LA   L+        
Sbjct: 71  GGYAMAMHLKLADAGPGNLPDFMVLYGTTDTLPWWWVPFANPVFALAATVLLPMGVAALL 130

Query: 131 ---------EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                          L+           +            +  +  FF +       + 
Sbjct: 131 GSLIFRRRVRGAYFALLSQALTAAFAIWLVGQQATTGGTNGLTDIQGFFGYALDDPANQR 190

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +Y+V+  +     ++   L  +        +RD+++    L       KL  + V++  
Sbjct: 191 MVYFVIALVLLALIALARQLIHSRYGELLVAVRDSEERVRFLGYDPARVKLVVYVVAAGM 250

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AGA F  +   ISP +     +I ++    +GG  SL         +          
Sbjct: 251 AGLAGALFVPAVGIISPALIGIVPSIELVIGAAVGGRASLLGAVLGALAVAWAKTALSE- 309

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                         F    T    +   +V+      L  L  
Sbjct: 310 -------------EFPAAWTYFQGLLFVVVVAFLPGGLASLAR 339


>gi|315426866|dbj|BAJ48487.1| branched-chain amino acid ABC transporter permease [Candidatus
           Caldiarchaeum subterraneum]
          Length = 321

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 56/306 (18%), Positives = 104/306 (33%), Gaps = 12/306 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+   + L          +Y   +   IL+Y        ++ G  G L L     + +GA
Sbjct: 6   ALGAVIALAAVPFLVGLNEYYLFLVTLILLYTTIVVAWQLIGGYGGQLDLGAGAYHGLGA 65

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
                L   YG+S W+ + VS   +     ++G PS +     +  A   ++ +     I
Sbjct: 66  VITGFLMVNYGVSGWVGLLVSGAAAAGVAFLIGYPSFRLGLKEVWYALSSLALVLILQKI 125

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                              F    +R               +IF YY+   +   +  I+
Sbjct: 126 FLLWTDVAGPLERYIPYAEFDPLFMR------------AGTKIFYYYITAALLAATFLIV 173

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +RR+       +IR+N++A   L   +   KL A  + S    + G  +A+      P
Sbjct: 174 SRIRRSKTGLYLISIRENEEAAEMLGVDVRRYKLQALMIYSFIAAVTGGIYASMVGFYHP 233

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            +F    +I   ++ I+GG+  L      + IL+ V E            L +      +
Sbjct: 234 TLFDSWISIQTATLAIVGGLGHLLGPPIVSIILLTVQEYLRITLGAVIIGLHQVIFGIIL 293

Query: 319 RHTTLM 324
               + 
Sbjct: 294 VIIIMF 299


>gi|152988923|ref|YP_001349657.1| branched-chain amino acid transport protein BraD [Pseudomonas
           aeruginosa PA7]
 gi|150964081|gb|ABR86106.1| branched-chain amino acid transport protein BraD [Pseudomonas
           aeruginosa PA7]
          Length = 307

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 91/305 (29%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I  +   +     +P+
Sbjct: 11  LVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYIAFIAITLLAMMGLDSVPL 70

Query: 99  SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             + +    +I+                      I     I           +    +  
Sbjct: 71  MMLAAFVASIIVTSAFGYSIERVAYRPLRGGNRLIPLISAIGMSIFLQNAVMLSQDSKEK 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            + T +     F     + V+       + +    +   + L++ R+ +  A R   ++ 
Sbjct: 131 AIPTLLPGNFVFGESSMNGVVISYMQILIFVVTFLVMFGLTLFISRSRLGRACRACAEDL 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +A          I+     F   I   +  +LGG
Sbjct: 191 KMTNLLGINSNNIIALTFVIGAALAAVAAVLLGMQYGVIN-PGIGFLAGIKAFTAAVLGG 249

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L         +    +  ++ F               L LV+L R  
Sbjct: 250 IGSIPGAMLGGLLLGVAEAFGADVFGDQYKDVVAFG-------------LLILVLLFRPT 296

Query: 338 SLLRL 342
            +L  
Sbjct: 297 GILGR 301


>gi|313672660|ref|YP_004050771.1| amino acid/amide abc transporter membrane protein 1, haat family
           [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939416|gb|ADR18608.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Calditerrivibrio nitroreducens DSM 19672]
          Length = 285

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 90/290 (31%), Gaps = 24/290 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A G ++V G + L++      + +GA+  +++  + G +  L+I  
Sbjct: 9   IINGITVGSIYSLVALGYTMVYGIIKLINFAHGDIFMVGAFIGLLVSIKLGANFILVIFF 68

Query: 99  SAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           + +++   G+++   +       +   I+ LI +      +     + NG          
Sbjct: 69  AMILTSFIGVLVEKIAYNPLRNRNSARISALISAIGVSIFISNLVVLINGPQNESYP--- 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             + +   I    +++    L   +   +  T I  A R +  N
Sbjct: 126 ------------------ALLPNNILQPLIIVISIGLMYGLYYIVHNTKIGIAMRAVSYN 167

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 +           FA+ S   G AG         + P M      +      +LG
Sbjct: 168 VNTARLMGINPDLVISFTFAIGSFLAGAAGVLVGTYYRAVDPFM-GMMFGLKAFVAAVLG 226

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           G+ S+        IL     L        F   + F     +       +
Sbjct: 227 GIGSIPGAMVGGLILGLTEVLGVAFISSSFRDAIAFGILILILIIKPAGL 276


>gi|266625288|ref|ZP_06118223.1| galactoside ABC transporter, permease protein MglC [Clostridium
           hathewayi DSM 13479]
 gi|288862812|gb|EFC95110.1| galactoside ABC transporter, permease protein MglC [Clostridium
           hathewayi DSM 13479]
          Length = 553

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/298 (9%), Positives = 77/298 (25%), Gaps = 9/298 (3%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +   + ++  Q    +  A G++ ++   G   L+      +G  +  I+  +   
Sbjct: 250 VPLLTYNNVLNILQQASPRMFLALGVAGLILLTG-TDLSIGRMVGMGMTTATIIMHQGVN 308

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           +  +   V        G+ +           L      +   F         I+     +
Sbjct: 309 TGMVFGHVFDFTGLPIGVRVIFALFM--CIVLCTCFTAIGGFFTARFKMHPFISTMANML 366

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +   + +    V         P   +        ++L        +     +T      
Sbjct: 367 VIFGLVTYATKGVSFGAIDPSIPKMIIPRLNGFPTIILWAIAAIVIVWFIWNKTTFGKNL 426

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N +A      ++ +  + AF ++    G       A         +     +  I
Sbjct: 427 YAVGGNPEAASVSGISVFWVTMGAFILAGILYGFGSWLECARMVGSGSAAYGQGWEMDAI 486

Query: 271 SIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           +  ++      GG+  +S +     I   ++     +        +          T 
Sbjct: 487 AACVVGGVSFTGGIGKISGVVVGVLIFTVLIYSLTILGIDTNLQFVFEGIIIITAVTL 544


>gi|125718527|ref|YP_001035660.1| branched-chain amino acid ABC transporter permease [Streptococcus
           sanguinis SK36]
 gi|125498444|gb|ABN45110.1| ABC transporter membrane-spanning permease-branched chain amino
           acid transport, putative [Streptococcus sanguinis SK36]
 gi|324991355|gb|EGC23288.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK353]
 gi|324993708|gb|EGC25627.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK405]
 gi|324994979|gb|EGC26892.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK678]
 gi|325687065|gb|EGD29088.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK72]
 gi|325690654|gb|EGD32655.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK115]
 gi|325694983|gb|EGD36887.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK150]
 gi|327462072|gb|EGF08401.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1057]
 gi|332358288|gb|EGJ36114.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK355]
 gi|332359073|gb|EGJ36894.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK49]
 gi|332362299|gb|EGJ40099.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1056]
 gi|332367222|gb|EGJ44957.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1059]
          Length = 289

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 108/303 (35%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y IGA+    L +    + +L + +
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMIGAFMGYYLINILKFNFFLSLIL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +   +   IA LI +     +L        G            
Sbjct: 65  AMIGTAILGVVIEFLAYRPLRNSTRIAALITAIGVSFLLEYGMIFFVGANTRS------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I+  RF    +        +L    FL  ++   +++T +  A R +  +  
Sbjct: 118 ----FPQVIKTVRFNLGPISISNIQLLILGISIFLMVALQFIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  I      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GMTPGIKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +      +               +     ++   L +++L+R   
Sbjct: 233 GIIPGAALGGFVIGLLETFATALG-------------LSDFRDAIVYAILIVILLIRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|126463708|ref|YP_001044822.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
 gi|126105372|gb|ABN78050.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
          Length = 310

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 62/320 (19%), Positives = 112/320 (35%), Gaps = 28/320 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +LA+   +L  +         Y  +   +IL+   +A G +I  G  GLLSL   + +A 
Sbjct: 3   MLALHLAVLAGIAALQFVLPAYHHTNAARILVLATYAIGFNIAFGYTGLLSLGHALFFAG 62

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G Y+  +L  + G   W  +    +  G     +GL +L+  G    I TL+ ++ F   
Sbjct: 63  GMYATGLLVDQGGWQPWAALLAGPVAGGVLAAGVGLLALRTAGPAFMIVTLMFAQAFHLA 122

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           ++ W   T G  G                     R     +      Y     +   +  
Sbjct: 123 ILYWGRFTGGDEG-------------FTLSGAARRIGPFDLADPTTRYGAAFLLFAAALL 169

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
             L L R+        +R+N++    L       KL A A+S    G AGA +      +
Sbjct: 170 GCLALVRSRTGRVLIAVRENEERTRMLGYDTFRTKLLALALSGLLSGAAGATYGLMFGYV 229

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
                    +I+ +  V+LGG  ++      TA+L  +++    +               
Sbjct: 230 GGSFAAIQYSILPLIWVLLGGAGTVLGPLLGTALLFYLIDWASSI--------------- 274

Query: 317 NMRHTTLMVIALFLVILMRS 336
                 ++   L L++L   
Sbjct: 275 TTASQFVVGAVLILLVLFAP 294


>gi|322411203|gb|EFY02111.1| branched-chain amino acid transport system permease protein
           [Streptococcus dysgalactiae subsp. dysgalactiae ATCC
           27957]
          Length = 289

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 105/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L +   L+ +L + +
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDLYMMGAFIGYYLINALQLNFFLALIL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +       IA LI +     +L        G         L  
Sbjct: 65  TMVFTACLGVLIEFLAYRPLRQSTRIAALITAIGVSFLLEYGMVYFVGAEARAFPQALKV 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +                 +        +LL    L  ++   +++T +  A R +  +  
Sbjct: 125 VKYH-----------LGPISVTNVQLIILLVSLTLMLALQFIVKQTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   I       FA+ SA  G AG       + I+P M   +  +      +LGG+
Sbjct: 174 AAQLMGININSIISFTFALGSALAGAAGVLIGLYYNSINPLM-GMTPGLKAFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    I+  +                      +     ++ + L +++L+R   
Sbjct: 233 GIIPGAAFGGFIIGLLET-------------FSTAIGLSSYRDAVVYVVLIMILLVRPAG 279

Query: 339 LLR 341
           LL 
Sbjct: 280 LLG 282


>gi|311103877|ref|YP_003976730.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310758566|gb|ADP14015.1| inner-membrane translocator 12 [Achromobacter xylosoxidans A8]
          Length = 309

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/319 (16%), Positives = 115/319 (36%), Gaps = 26/319 (8%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
            L         ++   +      +Y +FA G +++ G LG+++L     + +GAY+ + +
Sbjct: 8   ALTALESPIMFEQQFVNALSLGCVYALFALGFTLIFGVLGVINLAHGAVFMVGAYAALFV 67

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKP 142
             ++ L +W  +  +  ++G  G+I+         + +   +  +I +     IL     
Sbjct: 68  VQQFSLPLWAGLMAAFFVAGFTGVIIDYLVLKPLRKRNAPHLIPMIATIGVGIILNNGAQ 127

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
              G + +                +       + +   +    ++     L A ++  +R
Sbjct: 128 SIFGASNLRFPH----------GTVPEEVIEVAGLHLTVIELGIIFLSFALMAVLMYVMR 177

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           RT    A R I ++ KA + L   +    ++    ++A  G+AG       + + P M +
Sbjct: 178 RTQFGRALRAIAESPKAAWLLGINVEKLFVTTSFAAAALGGVAGVLIGLYSNALFPLMGQ 237

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
              +  + +++ILGGM  +         L     L            + F          
Sbjct: 238 PMLHKGI-AVIILGGMGDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG--------- 287

Query: 323 LMVIALFLVILMRSHSLLR 341
                LFL++L+R   L  
Sbjct: 288 ----LLFLILLVRPQGLFG 302


>gi|257388572|ref|YP_003178345.1| inner-membrane translocator [Halomicrobium mukohataei DSM 12286]
 gi|257170879|gb|ACV48638.1| inner-membrane translocator [Halomicrobium mukohataei DSM 12286]
          Length = 398

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 51/343 (14%), Positives = 110/343 (32%), Gaps = 40/343 (11%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS------RYGLSIW 93
               + +L + +FA     + G  G LS      Y  GAY+ +++ +             
Sbjct: 35  METMVAVLYFSLFAMSFDFISGYTGYLSFGHAAFYGTGAYTVLLIANGKVPLLGPETPFL 94

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + + V A+++    +++GL S +  G Y A+ TL  +++    +  W  + +        
Sbjct: 95  VALVVGAVLATVLAVVIGLVSFRLTGVYFAMITLGFAQVLYVFVRDWDYVGSNPRDGIAL 154

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFM-----------YYVLLGMCFLSASIILWLR 202
                    V  + +      +     + +           +Y +  +  L  + +  + 
Sbjct: 155 SGARGFELGVPYVDQLTVSLGTLTGDTLALAGHTLGTTTVSFYAVGVVVLLCFAAMQRIL 214

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-F 261
            +        IR+N+    ++       KL AFA+S  F G+AG   A  +  ++P+  F
Sbjct: 215 HSPFGRVMVAIRENEDRAEAIGYDTFRYKLGAFAISGFFGGVAGGLLAGFKRSVTPESGF 274

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAI----------------------LIGVVELCC 299
            F  +   +   I+GG  +L+                                   E   
Sbjct: 275 YFLTSGDALLASIIGGFGTLAGPLWGHLFDETVREFLSNRGQGGGLLPYLEQTLSEEFLT 334

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                          + N   +  + I   L +L     ++  
Sbjct: 335 TELVGGLTVEGFITAALNGHASLYVGIVFVLFVLYVPDGIVGT 377


>gi|158321522|ref|YP_001514029.1| inner-membrane translocator [Alkaliphilus oremlandii OhILAs]
 gi|158141721|gb|ABW20033.1| inner-membrane translocator [Alkaliphilus oremlandii OhILAs]
          Length = 291

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 90/305 (29%), Gaps = 22/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++      + +  Y      + + +  ++   V
Sbjct: 4   LTNGISLGSLYALIAIGYTMVYGILRLINFAHGEIFMMSLYFAFYGVAMFAMPWYIAFIV 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I+   GM++   + K   D   I  ++ +      +     +  G            
Sbjct: 64  TILITAVLGMLVERAAYKSLRDAPRITIMVSAIGASFFIQNLAIVLFGG----------R 113

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T     +         V  +     + +    L   ++  + +T    A R +  + +
Sbjct: 114 PKTVPTVEVLSGVIKLGSVSLQRLTLVIPVVTILLLFLLMFLVNQTKTGMAMRAVSKDYE 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + SA   + G  + A   +I P +      I      +LGG+
Sbjct: 174 TARLMGIDVNKIITITFGIGSALAAIGGIMWGAKFPKIDPFV-GTMPGIKCFIAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        IL     +              F     +                +   
Sbjct: 233 GNIPGAVIGGFILGIGEIMLIAFLPSLTGYRDAFAFILLIIILL-----------FKPTG 281

Query: 339 LLRLR 343
           ++  +
Sbjct: 282 IMGEK 286


>gi|114707717|ref|ZP_01440612.1| inner-membrane translocator [Fulvimarina pelagi HTCC2506]
 gi|114536961|gb|EAU40090.1| inner-membrane translocator [Fulvimarina pelagi HTCC2506]
          Length = 305

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 99/312 (31%), Gaps = 28/312 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--------YVILGSRYGL 90
           + +      IY + A G ++V G +G+++      + IGA+           +  +   L
Sbjct: 8   LINGITLGSIYGLIAIGYTMVYGIIGMINFAHGEIFMIGAFIALTTFLALAALGITFLPL 67

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + +++ V+   +   G  +   + +       +A LI +      L  +  +T G    
Sbjct: 68  VLLIILAVAMFFTAVWGWTIERVAYRPLRGSFRLAPLITAIGMSIFLQNFVQVTQGARVK 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +  ++         +          V        +++    L  +  L + +T++    
Sbjct: 128 PLPPQIQ------GGITLMDGPGGIVVQLSFMQIIIIVTTIVLMTAFSLLIGKTSLGRQQ 181

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    ++K    L   +       F + ++   +AG  +      I      F   +   
Sbjct: 182 RACEQDRKMAALLGVNVDRTISLTFVMGASLAAVAGLMYLLYYGVIDFY-IGFIAGVKAF 240

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ SL         +  +     G     +  +  F               L +
Sbjct: 241 TAAVLGGIGSLPGAMLGGLAIGLIETFWSGYFSVEYKDVAAFS-------------ILAI 287

Query: 331 VILMRSHSLLRL 342
           V++     LL  
Sbjct: 288 VLIFLPSGLLGR 299


>gi|77406656|ref|ZP_00783699.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae H36B]
 gi|77174728|gb|EAO77554.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae H36B]
          Length = 266

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 92/284 (32%), Gaps = 25/284 (8%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           +V G + L++      Y +GA+    L +   L+ +L + ++ + S   G ++   + + 
Sbjct: 1   MVYGIIKLINFAHGDIYMMGAFMGYYLINHLHLNFFLALLIAMLGSAFLGAVIEYLAYRP 60

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 IA LI +     +L        G                    I   ++    +
Sbjct: 61  LRKSTRIAALITAIGVSFLLEYGMVYLVGAD-----------TRAFPQAIHTVKYNLGPI 109

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                   +L     L  ++    ++T +  A R +  +  A   +   +       FA+
Sbjct: 110 TITNVQLIILGIALLLMLTLQFIXQKTKMGKAMRALSVDSDAAQLMGINVNRTISFTFAL 169

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            SA  G  G       + + P M   +  +      +LGG+  +   A    ++  +  L
Sbjct: 170 GSALAGAGGVLIGLYYNSVQPLM-GVTPGLKAFVAAVLGGIGIIPGAAIGGFVIGILETL 228

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              +               +     ++   L L+ L+R   +L 
Sbjct: 229 ATALG-------------VSDFRDGIVYAILILIFLIRPAGILG 259


>gi|317404588|gb|EFV84993.1| inner-membrane translocator [Achromobacter xylosoxidans C54]
          Length = 300

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 99/307 (32%), Gaps = 17/307 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      I ++ A GL++V G +G++++      A+GAY+  ++   +       + V
Sbjct: 10  LFNGISLFSILLLMAIGLAVVFGLMGVINMAHGELMAMGAYTTYLVSVAFQHWAPGWMDV 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++     ++                   +     +L  W      +           
Sbjct: 70  YLFVAIPLAFLVTSAFGYLLERGF--IRWFYNRPLDTLLATWGLSLILQQAYRSIFGAQE 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + S +     P+  + + +   ++L     ++  + L L R+A     R +  N+ 
Sbjct: 128 VSVPLASWLSGAWEPTPDLQFPLNRIFILGLTLLVALGVYLLLYRSAWGLRVRAVTQNRA 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              ++           FA+ S   G+AG  F       +         +    +V+ GG+
Sbjct: 188 MAGAVGINTRRVDALTFALGSGLAGIAGCVFTMIGS--TNPGTGQLYIVDSFIVVVFGGV 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL   A +   +         +       +              +++ +  V+  R + 
Sbjct: 246 QSLLGTAFSGLAIAQSQTTLEYLMSGSMAKVT-------------ILVLVIAVLYFRPNG 292

Query: 339 LLRLRTP 345
           L   +T 
Sbjct: 293 LFATKTR 299


>gi|294853796|ref|ZP_06794468.1| predicted protein [Brucella sp. NVSL 07-0026]
 gi|294819451|gb|EFG36451.1| predicted protein [Brucella sp. NVSL 07-0026]
          Length = 308

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 92/294 (31%), Gaps = 27/294 (9%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107
           + + A GL+++ G + +++         G +   ++ ++ GL  +  + +    +     
Sbjct: 32  FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 91

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +I  L            A +  +      +I    +  G                  +  
Sbjct: 92  LIQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 140

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                    +       ++ LG   L  ++ L+L+ +    A R +  ++ A   +   +
Sbjct: 141 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGRAIRAVAQHRSAAELMGVNV 200

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
               +  F + +A +G+A    A      S     F        +V+LGG+ S+      
Sbjct: 201 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 258

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             I+  +  +                   +     ++     L+++++   L  
Sbjct: 259 ALIIGVIDTMSGYYIG-------------SDLREAVVFGIFLLILILKPSGLFG 299


>gi|239982825|ref|ZP_04705349.1| branched-chain amino acid ABC transporter permease protein
           [Streptomyces albus J1074]
          Length = 384

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/343 (13%), Positives = 95/343 (27%), Gaps = 29/343 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L A     +L   +       +   +  + L   + A G+ +  G  GLL+L   + + +
Sbjct: 31  LAAFALGAVLLFAVAPLALTDFRLGLLAKYLCTAIVAVGVCLAWGRGGLLTLGQGVFFGL 90

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS------ 130
           G Y+  +           L     +      +             LA   L+        
Sbjct: 91  GGYAMAMHLKLADAGPGNLPDFMVLYGTTDTLPWWWVPFANPVFALAATVLLPMGVAALL 150

Query: 131 ---------EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                          L+           +            +  +  FF +       + 
Sbjct: 151 GSLIFRRRVRGAYFALLSQALTAAFAIWLVGQQATTGGTNGLTDIQGFFGYALDDPANQR 210

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +Y+V+  +     ++   L  +        +RD+++    L       KL  + V++  
Sbjct: 211 MVYFVIALVLLALIALARQLIHSRYGELLVAVRDSEERVRFLGYDPARVKLVVYVVAAGM 270

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AGA F  +   ISP +     +I ++    +GG  SL         +          
Sbjct: 271 AGLAGALFVPAVGIISPALIGIVPSIELVIGAAVGGRASLLGAVLGALAVAWAKTALSE- 329

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                         F    T    +   +V+      L  L  
Sbjct: 330 -------------EFPAAWTYFQGLLFVVVVAFLPGGLASLAR 359


>gi|33598453|ref|NP_886096.1| branched chain amino acid ABC transporter permease [Bordetella
           parapertussis 12822]
 gi|33574582|emb|CAE39230.1| probable branched-chain amino acid transport system, permease
           component [Bordetella parapertussis]
          Length = 321

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 61/279 (21%), Positives = 122/279 (43%), Gaps = 15/279 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           F  +       +  S   ++LIY + A  L++++G  G+++L     +  GAY+  ILG+
Sbjct: 18  FPLVAPALGLDFYISFVRRVLIYALAATSLNLILGYGGMVALGHAAFFGAGAYAVGILGA 77

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
               S  L  P +  ++GA   I G  SL+ RG Y  + TL  +++   + I  +     
Sbjct: 78  AGITSALLAWPAAIALAGALAWITGAISLRTRGVYFIMITLAFAQMVYYVFISLRQYGG- 136

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                             +L  +   P   +  ++  YY++L +  +   +   +  +  
Sbjct: 137 --------------EDGLNLSGYSTLPGLDLANDLTFYYLVLVLFAVLMGVFGRVVDSRF 182

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A + IR+N+    SL   +   KL+AF +S A  G+AGA  A     ISP +  ++++
Sbjct: 183 GAALQGIRENESRMESLGYPVYRLKLTAFVISGAAAGLAGALLANHNLFISPSLMHWTQS 242

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
             ++ +V++GG+           +++ + E+      Y+
Sbjct: 243 ANLLIMVLVGGIGLRYGGVAGAVVMLVLEEVLRQWTEYW 281


>gi|170741680|ref|YP_001770335.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168195954|gb|ACA17901.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 332

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 54/326 (16%), Positives = 117/326 (35%), Gaps = 32/326 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +   L+                  ++++ Y +FA   ++++G  GL+S           Y
Sbjct: 7   LFAALVAAALAVPFVPHLIYPVFVMKVMCYGLFACAFNLLLGFTGLVSFAHAAFLGTAGY 66

Query: 80  SYV---ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                 I    + L +        + +   G+++G  +++ RG   A+ TL +S++   +
Sbjct: 67  VTGALMIRLGSHPLGMPAAFLAGVLAAALAGLVIGGLAIRRRGISFAMITLALSQVVSFL 126

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            ++ +  T G+ G+    R                F    +  +  MYY+ L +      
Sbjct: 127 AVQLRW-TGGEDGLQGIPRGS-------------LFGLVALSSDTAMYYLTLALFAAGFL 172

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  +  +      + +RDN+    SL       KL AF +S+A  G AGA  A     +
Sbjct: 173 FVYRVVHSPFGRILQAVRDNEARATSLGYETDRFKLIAFVLSAAVAGAAGALKALVFQLV 232

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           S +      +  V+ + +LGG+ +L       A+++G+      +               
Sbjct: 233 SLNDVSLHTSTEVVLMTLLGGVGTLFGPLVGAALVVGLQNYLATLGDLV----------- 281

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
               T ++ +   L +      ++  
Sbjct: 282 ----TVVIGLIFILCVSFFRRGVVGE 303


>gi|91786888|ref|YP_547840.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91696113|gb|ABE42942.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas sp. JS666]
          Length = 349

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 50/302 (16%), Positives = 113/302 (37%), Gaps = 15/302 (4%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
             F+     Q++  +   +I+IY + A  L+I +G  GL+S    +   +G Y+  +   
Sbjct: 25  VPFVAQATDQQFYVAFFARIIIYAIAACALNIALGYGGLVSFGHSLFLGLGGYAVGLASF 84

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
               + W+ + ++  + G   ++ G  SL+  G    + TL  +++   + +       G
Sbjct: 85  YGVGNGWVHLALTLGVCGLVALVTGAISLRTTGIAFIMITLAFAQMGYFLFVSL-KHYGG 143

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             G+ +A    F    + S    +      ++  I                +  LR    
Sbjct: 144 DDGMPIAQTSRFGPLDLSSATNVYVVAFVVLVLSI--------------WWLARLRVAPF 189

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R  + N +   +    ++  +L A+ +S    G+AG   A      SP    ++ +
Sbjct: 190 GMVIRGAKQNARRVNAAGIPVLRYQLLAYVMSGMLCGVAGLLLANLNAFASPSTLAWAVS 249

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             +I IV++GG+ ++        + +G+ E+  G   ++            +     ++ 
Sbjct: 250 GELIVIVVIGGLGTVFGPLMGALVFLGLEEILKGFTDHWMVIFGPLIVIVALLGKRGIIG 309

Query: 327 AL 328
            L
Sbjct: 310 LL 311


>gi|322391652|ref|ZP_08065120.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus peroris
           ATCC 700780]
 gi|321145463|gb|EFX40856.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus peroris
           ATCC 700780]
          Length = 289

 Score = 73.7 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 105/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L +   L+ ++ + +
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFMGYFLINSLQLNFFVALIL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S + S   G+++   + +       I+ LI +     +L        G            
Sbjct: 65  SMIGSAILGVVIEFLAYRPLRHSTRISVLITAIGVSFLLEYGMVYLVGAN---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+  R+    +        +L     L   + L +++T +  A R +  +  
Sbjct: 115 -TRAFPQAIQTVRYDLGPISLTNIQLLILGVSLVLMVLLQLIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVFGILLLILIVRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|15902704|ref|NP_358254.1| branched chain amino acid ABC transporter permease [Streptococcus
           pneumoniae R6]
 gi|15458246|gb|AAK99464.1| ABC transporter membrane-spanning permease - branched chain amino
           acid transport [Streptococcus pneumoniae R6]
          Length = 292

 Score = 73.7 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + ++ ++ + V
Sbjct: 8   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +       IA LI +     +L        G            
Sbjct: 68  AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+  R+    +        +L     L   + + +++T +  A R +  +  
Sbjct: 118 -TRAFPQAIQTVRYDLGPISLTNVQLMILGISLILMILLQVIVQKTKMGKAMRAVSVDSD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 177 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 236 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 282

Query: 339 LLR 341
           +L 
Sbjct: 283 ILG 285


>gi|239909194|ref|YP_002955936.1| branched-chain amino acid ABC transporter permease protein
           [Desulfovibrio magneticus RS-1]
 gi|239799061|dbj|BAH78050.1| branched-chain amino acid ABC transporter permease protein
           [Desulfovibrio magneticus RS-1]
          Length = 305

 Score = 73.7 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 88/304 (28%), Gaps = 13/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++      +A G Y  VIL S       +    
Sbjct: 8   LINGLTLGGVYALVALGYTMVYGIIQLINFAHGEIFAAGGYLGVILLSYMASQGLMDSHP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++ A  + MG  ++            +      ++L+    ++       +  +  +
Sbjct: 68  WFGLAFALILAMGYCAMLAMAVEKVAYKPLRQSSRLSVLLSALGMSIFLQNGLMLTQGVY 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        F    V        +LL    L   +   + RT I  A R    ++ 
Sbjct: 128 DKAYPTEFTHG-GFEWLGVRVSFMQIGILLVTTLLLVLLNTLVFRTRIGKAMRATAQDKV 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + FA+ +A    AG         +      F   I   +  +LGG+
Sbjct: 187 MSALVGIHSDKVISTTFAIGAALAAAAGIMVGLYYGSV-RYDMGFVPGIKAFAAAVLGGI 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +++       I+  V  L                            + L  V+      
Sbjct: 246 GNITGAMIGGLIIGMVEILAAAYIPAG-----------GEYKDVFAFVILIGVLYFMPTG 294

Query: 339 LLRL 342
           ++  
Sbjct: 295 IMGE 298


>gi|17988411|ref|NP_541044.1| high-affinity branched-chain amino acid transport system permease
           protein LIVM [Brucella melitensis bv. 1 str. 16M]
 gi|256042954|ref|ZP_05445900.1| high-affinity branched-chain amino acid transport system permease
           protein LIVM [Brucella melitensis bv. 1 str. Rev.1]
 gi|260564188|ref|ZP_05834673.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1
           str. 16M]
 gi|265989387|ref|ZP_06101944.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1]
 gi|17984193|gb|AAL53308.1| high-affinity branched-chain amino acid transport system permease
           protein livm [Brucella melitensis bv. 1 str. 16M]
 gi|260151831|gb|EEW86924.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1
           str. 16M]
 gi|263000056|gb|EEZ12746.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1]
          Length = 406

 Score = 73.7 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/311 (16%), Positives = 108/311 (34%), Gaps = 26/311 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                + + +  IQ+LI  +FA   S++ G  G+LS      + +G+++ V + + +G  
Sbjct: 20  PYLVSESMTNAAIQMLIAALFATAFSLLCGHAGMLSFGHAAYFGLGSFAAVHVMNAFGGE 79

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L  P+  +     G++ GL +  F      +   +++     +L    P   G  G  
Sbjct: 80  GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFGGE 139

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                + +                       +YY+ L     S  ++  L  T       
Sbjct: 140 AGVSSFRMPAW-----------GFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R+N      L   +       FA+S+ F G+AGA  A + +  +  +F+   +  V+ 
Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
              +GG+ +    A   A +     +   +   +                    + L LV
Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLILVLV 293

Query: 332 ILMRSHSLLRL 342
           ++     L+  
Sbjct: 294 MMFLPRGLVGE 304


>gi|226361261|ref|YP_002779039.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226239746|dbj|BAH50094.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 372

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 49/326 (15%), Positives = 97/326 (29%), Gaps = 29/326 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 +  S+  + L + + A G+ +  G  G+L+L   + + +GAY   +        
Sbjct: 27  PAVLSDFRLSLLGKFLCFAIVAVGIGLAWGRGGMLTLGQGVFFGLGAYMMAMHLKIADAD 86

Query: 92  I---------------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                            L        S    ++  L         L +            
Sbjct: 87  FRGDTVPDFMQIAGIRELPGYWVPFTSPILTILGILLVPALVAFVLGLGVFKRRVKGAYF 146

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            I  + +    A + V  +       +     FF F  +    +  ++++  G+     +
Sbjct: 147 AILSQALAAAFAILLVGQQSTGGSNGLNRFRTFFGFNLNDPANKQMLFFIAAGVLLAVVA 206

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +   L  +        +RD ++    L       KL A+  ++ F G+AGA F      I
Sbjct: 207 VTRQLMNSRYGELLVAVRDQEERVRFLGYDPANIKLVAYVTAAFFAGLAGALFVPIVGII 266

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP       +I  +  V +GG ++L         +                    F  SF
Sbjct: 267 SPADVGIVPSIAFLIGVAIGGRSTLLGPVLGAIGVAWAQS--------------AFSESF 312

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
               T    +   +V+      +  L
Sbjct: 313 PSGWTYAQGLLFIVVVGFFPAGVAGL 338


>gi|220910261|ref|YP_002485572.1| inner-membrane translocator [Cyanothece sp. PCC 7425]
 gi|219866872|gb|ACL47211.1| inner-membrane translocator [Cyanothece sp. PCC 7425]
          Length = 316

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 57/288 (19%), Positives = 115/288 (39%), Gaps = 31/288 (10%)

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGS---------RYGLSIWLLIPVSAMISGACGMIMGL 112
             G LSL     YA+G Y   +L +              +   + ++A++SGA G+++G+
Sbjct: 30  MAGQLSLASPGFYALGGYIAAVLSTKVFPSQGPHFPIPFLLAEMALAAIVSGALGIVVGI 89

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
           P+L+ RG YLAIAT+   EI + + +  + IT G  GI+   + +               
Sbjct: 90  PALRLRGIYLAIATIAFVEILRVLALNLE-ITGGAVGIFGIPQPF--------------- 133

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
                   I   ++ + +  +S  ++  L R  +  A+  IR+++ A  ++     + K+
Sbjct: 134 -----TTPIEYLWIAVPLLLISMVLLYRLERIRVGRAFTAIREDELAADAMGINPTYYKV 188

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
            AF + +   G+ GA  A   +  +     F   II ++ V++GG  +         +  
Sbjct: 189 LAFTLGAILAGVVGAVSAHFLNTWNARQGTFDAGIIYLTSVLIGGTRTFVGPVLGGMVFT 248

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
            + E+   +          F          +  + + L  +     L+
Sbjct: 249 ALPEVLRAVAE-LPGLPQWFAQFLRDGRLMVFGVLIVLGTIFFPQGLV 295


>gi|46579126|ref|YP_009934.1| branched-chain amino acid ABC transporter permease [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120603296|ref|YP_967696.1| inner-membrane translocator [Desulfovibrio vulgaris DP4]
 gi|46448539|gb|AAS95193.1| branched-chain amino acid ABC transporter, permease protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563525|gb|ABM29269.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311232967|gb|ADP85821.1| inner-membrane translocator [Desulfovibrio vulgaris RCH1]
          Length = 301

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 85/289 (29%), Gaps = 3/289 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L L++      + IGAY    + +  GLS  +   V
Sbjct: 8   LTNGLAVGGIYALIALGYTMVYGVLKLINFAHGDLFTIGAYLGFTVFAALGLSGHVSGAV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++     M +                   S +  + ++     +       +      
Sbjct: 68  AVLLVTTMVMGLVALIGYLLERVAYRPLRSSSRL--SAVVSALGASIFFQNAVMLIYGAK 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +          +   +    +      L   +  ++ RT    A R +  +Q 
Sbjct: 126 FQVYPNDIRPTMAVSFFGMDIPLVRIMMFGASVALMLLLHFFIHRTRTGTAIRAVAIDQG 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       F +  A  G AG        +I   M  +   +   +  ILGG+
Sbjct: 186 AAKLMGIDVNRVIALVFMIGPALGGAAGVMVGLYYGQIDFTM-GWVYGLKAFTAAILGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            ++        +L  +  L        +   + F     +       + 
Sbjct: 245 GNIPGAMVGGLLLGVIEALGAAYISIAWKDAIAFLVLILILIIRPTGLL 293


>gi|229488881|ref|ZP_04382747.1| branched-chain amino acid transport system permease protein LivH
           [Rhodococcus erythropolis SK121]
 gi|229324385|gb|EEN90140.1| branched-chain amino acid transport system permease protein LivH
           [Rhodococcus erythropolis SK121]
          Length = 298

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 85/306 (27%), Gaps = 19/306 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      IY + A  L +V  + G ++           +    L +        +   
Sbjct: 8   LISGLTNGSIYAILALALVVVFRATGTINFAQGELALFTTFVAWWLTTMSWPIWAAIGAA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+      ++  L     +        ++   +F  +      +   +  I  +     
Sbjct: 68  LALGFLLGALMERLLIRPVQRRSDMAVLIVALGLFTGLNSLAGMLWGSETKIMPSPFPNG 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +                      VL+ +  L   + L  R+T +    R + DN +
Sbjct: 128 PTDYIS---------VGGARVYGDALGVLVALVVLLVLMSLLFRKTRVGLHMRAVADNAE 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           +               + V++A   +AG        +       F   I   +  + GG+
Sbjct: 179 SATLAGVPTSRILAIGWGVAAAIGALAGVLVTPLSPQQLGLTTMFPIFIAASAAALFGGL 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL         +  +  +  G       SL +              + + +++ +R + 
Sbjct: 239 DSLVGAVVGGLTIGVLESMLSGYISVIGGSLQQTSAL----------LIIVVILFVRPNG 288

Query: 339 LLRLRT 344
           L   + 
Sbjct: 289 LFGTKK 294


>gi|66045444|ref|YP_235285.1| inner-membrane translocator [Pseudomonas syringae pv. syringae
           B728a]
 gi|63256151|gb|AAY37247.1| inner-membrane translocator [Pseudomonas syringae pv. syringae
           B728a]
          Length = 300

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 92/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+ A GL+IV G +G++++      A+G+Y   +    +      L+    +I
Sbjct: 14  FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYMTYVTSVVFQRYFPELMDWYFII 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 ++                 + +     +L  W      +           +   
Sbjct: 74  GIGMAFVVTFAFGLLLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 131

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               ++     S  +   +   +++     ++A++ L+L R+      R +  N+    +
Sbjct: 132 TVQWLQGAWKISDGLELPLNRIFIIGLTFVIAAAVFLFLYRSRWGLRIRAVTQNRAMAGA 191

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     G+AG+ F       +  +      +    +V+ GG+ SL 
Sbjct: 192 AGINTARVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 249

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +         +        +               + + +++  R + L   
Sbjct: 250 GTFLSAFAIGQTQVSLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 296

Query: 343 R 343
           +
Sbjct: 297 K 297


>gi|159042945|ref|YP_001531739.1| ribose transport system permease rbsC [Dinoroseobacter shibae DFL
           12]
 gi|157910705|gb|ABV92138.1| ribose transport system permease protein rbsC [Dinoroseobacter
           shibae DFL 12]
          Length = 357

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 92/313 (29%), Gaps = 18/313 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L     +   L      S   +  +  Q+ I  + A   S+V+ + G + L+     
Sbjct: 49  LIVLVAAIAVFGLLLGSKFFSPFALTLILQQVQIVGIVAAAQSLVILTAG-IDLSVGAIM 107

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +        RYGL + + +    +     G I G    K +     +   +   +  
Sbjct: 108 VMSSVVMGQFTFRYGLPVEVAVACGLLCGTLLGFINGWLVAKVKLPPFIVTLGMWQIVLA 167

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +  +  T     I     L               F ++  I    + Y ++ M  L 
Sbjct: 168 ANFLYSRNETIRSQDIRDQAPLLQF------------FGTTLEIGGARLTYGVIFMVLLV 215

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   LR TA       + D+ +A       +    +S + +S      AG        
Sbjct: 216 IVLAYALRHTAWGRHVYAVGDDPEAAELSGVQVSRTLISVYMLSGLICAFAGWALIGRIG 275

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   + +    + ++VI      GG  S+        I+         +      + 
Sbjct: 276 SVSPTSGQLANIESITAVVIGGISLFGGRGSILGAFFGALIVGVFTLGLRLLGADAQWTF 335

Query: 310 LKFDCSFNMRHTT 322
           L            
Sbjct: 336 LLIGLLIIAAVAV 348


>gi|323351067|ref|ZP_08086724.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           VMC66]
 gi|322122791|gb|EFX94500.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           VMC66]
 gi|325696300|gb|EGD38191.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK160]
 gi|327462978|gb|EGF09299.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1]
 gi|327470484|gb|EGF15940.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK330]
 gi|327474581|gb|EGF19986.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK408]
 gi|327490139|gb|EGF21927.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1058]
 gi|328946908|gb|EGG41045.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus sanguinis
           SK1087]
          Length = 289

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 108/303 (35%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y IGA+    L +    + +L + +
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMIGAFMGYYLINILKFNFFLSLIL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +   +   IA LI +     +L        G            
Sbjct: 65  AMIGTAILGVLIEFLAYRPLRNSTRIAALITAIGVSFLLEYGMIFFVGANTRS------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I+  RF    +        +L    FL  ++   +++T +  A R +  +  
Sbjct: 118 ----FPQVIKTVRFNLGPISISNIQLLILGISIFLMVALQFIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  I      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GMTPGIKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +      +               +     ++   L +++L+R   
Sbjct: 233 GIIPGAALGGFVIGLLETFATALG-------------LSDFRDAIVYAILIVILLIRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|166030762|ref|ZP_02233591.1| hypothetical protein DORFOR_00436 [Dorea formicigenerans ATCC
           27755]
 gi|166029344|gb|EDR48101.1| hypothetical protein DORFOR_00436 [Dorea formicigenerans ATCC
           27755]
          Length = 294

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 102/306 (33%), Gaps = 24/306 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      +Y + A G ++V G   +L+        +GAY  +   +  GL+  + I
Sbjct: 5   SYLINGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMVGAYIVLTCVTGAGLNPIVAI 64

Query: 97  PVSAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
            ++ +     G+++   +    R     +A LI +     +L     +  G       + 
Sbjct: 65  IIATIACTIFGVVIEGVAYRPLRNAASPLAVLITAIGVSYLLQNLALLIFGSNTKSFPEV 124

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           +      +             +         ++    + A ++L++ +T    A   + +
Sbjct: 125 IKLPNLKLAG---------GKLTITGTTILTIVLCIVIMAGLMLFINKTKAGQAMLAVSE 175

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A   +   +       FA+ SA   +AG    ++   ++P        I      + 
Sbjct: 176 DKGAAQLMGINVNKTISMTFAIGSALAAIAGVLLCSAYPSLTPYT-GSMPGIKAFVAAVF 234

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S+                  G        +L      +     ++   L +V+L++
Sbjct: 235 GGIGSV-------------PGALIGGIILGIIEILGKAYISSQLADAIVFAVLIVVLLVK 281

Query: 336 SHSLLR 341
              +L 
Sbjct: 282 PTGILG 287


>gi|303247276|ref|ZP_07333550.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
 gi|302491435|gb|EFL51323.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
          Length = 294

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 107/304 (35%), Gaps = 21/304 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     LIY + A G ++V G + L++      Y +GA+   +     G+ + L + +
Sbjct: 6   LVNGFTLGLIYALIAVGYTMVYGVIELINFAHGEIYMLGAFLT-LSFLSMGMPLALAVVL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +   A G+++ + + +   +   +A LI +      L     I  G         L F
Sbjct: 65  AMLAVAAIGVLLDVVAYRPLREAPRLAALITAIGMSIFLQNLAMIIWGSR------PLPF 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +      F  S V        + +    L  ++ L + +T I  A R +  N+ 
Sbjct: 119 PRQALPAFFNEPAFHFSDVTISWMQVIIYVVALLLMVALNLIITKTRIGTAMRALAQNRT 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ S    +AG   +   + + P M   +  +   +  +LGG+
Sbjct: 179 AAALMGINVNRVISFTFALGSGMGAVAGVMVSMYYNTMYPTMGYLA-GVKAFAAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L     L  G                +     +    + LVI+ R   
Sbjct: 238 GSVPGAMLGGVVLGIAETLGAGYIS-------------SPYRDGVAYAVMILVIIFRPSG 284

Query: 339 LLRL 342
            L  
Sbjct: 285 FLGR 288


>gi|86607100|ref|YP_475863.1| hydrophobic amino acid ABC transporter permease [Synechococcus sp.
           JA-3-3Ab]
 gi|86555642|gb|ABD00600.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Synechococcus sp. JA-3-3Ab]
          Length = 285

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 49/301 (16%), Positives = 96/301 (31%), Gaps = 28/301 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   IY + A G+S+  G L   +        +GAY + +    +G  + +    +A+ 
Sbjct: 12  LVLGSIYALGAIGVSLTFGILRFANFAHGDLMTLGAY-FALTFVGWGWPLEVSWIPAALA 70

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +  C + +     +       +  LI S     IL     I  G         +      
Sbjct: 71  TALCAVGIDQLVYRRLRREAPVILLISSFGTALILRSLVQILWGPNNQVYRSGIQLPWQF 130

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               ++                 +L+G   L  ++ L+L+ T +  A R + DN      
Sbjct: 131 WGLRVKPDW------------VAILVGTALLVVALHLFLQHTRVGKAMRAMADNFDLAKV 178

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                    L  +A+ +A   +AG F              +   + V +  ILGG+    
Sbjct: 179 TGIDTERIILWTWAIGAALACVAGIFLGLDTRL--HPTMGWRLLLPVFAAAILGGIGRPY 236

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  ++    E    +    + + + F               L L++++R   LL  
Sbjct: 237 GAIAGGLVIGLAEEFSTLVLSPAYKTGVAF-------------AILVLLLILRPTGLLGG 283

Query: 343 R 343
           R
Sbjct: 284 R 284


>gi|146277042|ref|YP_001167201.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025]
 gi|145555283|gb|ABP69896.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025]
          Length = 410

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 56/367 (15%), Positives = 118/367 (32%), Gaps = 37/367 (10%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +  IL L  +   LL   +  A  S  +I ++G + L   + A  + +V G  G+LSL  
Sbjct: 15  FLLILALFTLGVTLLSHAYGSAFLSTSFIKTLG-KTLCLCLVALAMDLVWGYAGILSLGH 73

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVS-----------------AMISGACGMIMGLP 113
           +  +A+G Y   +          ++  ++                  +     G  +   
Sbjct: 74  MAFFALGGYMIGMWLMYARTEEIVVQALANAPLPATPQEISNGVASQIFGVVGGAELPAV 133

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
                   L +A +++      +   W    +   G+Y++     +   +   +      
Sbjct: 134 WTFAHSLPLQLALVVLVPGLLALAFGWLAFRSRVTGVYLSILTQAMTLALALHLFQNDSG 193

Query: 174 SSFVI------------------YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                    ++ ++  +    L   +  WL      +  R IRD
Sbjct: 194 LRGNNGLSGLQNIPGLGGVSQDRLSVWFFWASVAALALGYLLAAWLVSGKFGSVLRAIRD 253

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++    L  ++   KL  F  ++    +AGA +      I+P       +I +   V +
Sbjct: 254 DEQRVRFLGYSVEGYKLFIFTFTAVVAAVAGALYYPQAGIINPAELAPIASIYLAVWVAI 313

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG   L       A +  +     G      N  + +   +      L+ +A  LV L+ 
Sbjct: 314 GGRGRLYGAVIGAAFVSLLSTWFTGGRAPDVNLGI-YTIQWVDWWQILLGLAFVLVTLLA 372

Query: 336 SHSLLRL 342
              +  L
Sbjct: 373 PQGIGGL 379


>gi|90425643|ref|YP_534013.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90107657|gb|ABD89694.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 433

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 49/329 (14%), Positives = 113/329 (34%), Gaps = 32/329 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +   L+ L L    S     +    I I ++FA   +I++G  G+LS    + Y +G 
Sbjct: 24  IWIAVALMLLLLPKIFSSGGSLTTFSLIGISIIFALSYNILLGQTGMLSFGHAVYYGLGG 83

Query: 79  Y-----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +        I+G ++ + + L+  +          ++G    +  G   A+ +L ++E+ 
Sbjct: 84  FLAIHAINFIVGHKFPIPLPLVPLIGGATGLFFAALIGWVMTQRSGTAFAMISLGLAELV 143

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
            +  +  +    G+AG+              +  +  +        +I +YY++     L
Sbjct: 144 ASSALILRSFFGGEAGVS------------ANRTKLLKVFDWNFGPQIQIYYLVAAWTLL 191

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +   +  L RT +      +RDN +    +       +  AF  +  F G+AGA  A + 
Sbjct: 192 AVIAMYALTRTPLGRMCNAVRDNPERVQFVGYDPHVIRYLAFCFAGFFAGIAGALAAINF 251

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           +  +       ++  V+    +GG+            +  +      +   +        
Sbjct: 252 EIANSAYLGAVQSGTVLFAAYIGGIGFFIGPIVGAIFVTFLSLGLSDVTPVW-------- 303

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                       +    V++     +  L
Sbjct: 304 -------QLYFGLFFIAVVMFAPGGVTGL 325


>gi|23013796|ref|ZP_00053654.1| COG4177: ABC-type branched-chain amino acid transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 330

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 60/317 (18%), Positives = 117/317 (36%), Gaps = 22/317 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S+ + ++ +       +I++G  G LSL   +   +GAY+   L    G+   L +
Sbjct: 24  PYLLSVLVVVMYFAYVGQTWNIMMGFAGQLSLGHTLYVGLGAYTAAALFVHLGVPAALGL 83

Query: 97  PVSAMISGACGMIMGLPSLKF--RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
             +   +   G I+G    +F  +G Y A+ T+  +E  + +      +           
Sbjct: 84  FAAVGAAVLTGGIVGALGFRFGVKGVYFALLTIAFAEFTRILFEHIPGL----------- 132

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                G  +    R          + +  YY++L M      +  WL R+ +   W  +R
Sbjct: 133 -GGPGGLFLPVGDRNGIDLIHLRGHPLMFYYLILAMTVGIFLLCRWLLRSRLGYTWLAVR 191

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVISIV 273
           ++Q+A  +L   +  AKL A  +S+    + G FFA   + + P+  F  + +I +I   
Sbjct: 192 EDQEAAAALGINVFRAKLYAVMLSAGLTALGGVFFAFYYNNLFPNQAFGMNRSIEIILAP 251

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           I+GG+ +L        IL  + E                             ++L  ++ 
Sbjct: 252 IVGGLGTLFGPILGALILTPLGEGITLATEAM-------GFKAAGIKQLCYGLSLLAIVK 304

Query: 334 MRSHSLLRLRTPSNFLE 350
                +         LE
Sbjct: 305 FLPDGVWPWARARLGLE 321


>gi|315425101|dbj|BAJ46773.1| branched-chain amino acid transport system permease protein
           [Candidatus Caldiarchaeum subterraneum]
 gi|315428034|dbj|BAJ49622.1| branched-chain amino acid ABC transporter permease [Candidatus
           Caldiarchaeum subterraneum]
          Length = 321

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 56/306 (18%), Positives = 105/306 (34%), Gaps = 12/306 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+   + L +        +Y   +   IL+Y        ++ G  G L L     + +GA
Sbjct: 6   ALGAVIALAVVPFLVGLNEYYLFLVTLILLYTTIVVAWQLIGGYGGQLDLGAGAYHGLGA 65

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
                L   YG+S W+ + VS   +     ++G PS +     +  A   ++ +     I
Sbjct: 66  VITGFLMVNYGVSGWVGLLVSGAAAAGVAFLIGYPSFRLGLKEVWYALSSLALVLILQKI 125

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                              F    +R               +IF YY+   +   +  I+
Sbjct: 126 FLLWTDVAGPLERYIPYAEFDPVFMR------------AGTKIFYYYITAALLAATFLIV 173

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +RR+       +IR+N++A   L   +   KL A  + S    + G  +A+      P
Sbjct: 174 SRIRRSKTGLYLISIRENEEAAEMLGVDVRRYKLQALMIYSFIAAVTGGIYASMVGFYHP 233

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            +F    +I   ++ I+GG+  L      + IL+ V E            L +      +
Sbjct: 234 TLFDSWISIQTATLAIVGGLGHLLGPPIVSIILLTVQEYLRITLGAVIIGLHQVIFGIIL 293

Query: 319 RHTTLM 324
               + 
Sbjct: 294 VIIIMF 299


>gi|254514849|ref|ZP_05126910.1| urea ABC transporter, permease protein UrtC [gamma proteobacterium
           NOR5-3]
 gi|219677092|gb|EED33457.1| urea ABC transporter, permease protein UrtC [gamma proteobacterium
           NOR5-3]
          Length = 361

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 56/333 (16%), Positives = 97/333 (29%), Gaps = 19/333 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + V    LL     +     Y  S+  + L Y + A  L +V G  GLLSL     +A
Sbjct: 23  LAIGVPLSNLLLPQESSFALSSYSVSLLGKYLCYALLALALDLVWGYAGLLSLGHGAFFA 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +G Y+  +   R   S  +                 LP      D+ + A L+   +   
Sbjct: 83  LGGYAMGMYLMRQIGSRGVYGDPELPDFMVFLDWQELPWYWLGFDHFSFALLMALLVPGA 142

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTV-------------------RSLIRFFRFPSSF 176
           + + +  +        V   +     T                            F    
Sbjct: 143 LALLFGWLAFRSRVTGVYFSIMTQAMTFALMLAFFRNEMGFGGNNGLTDFKDILGFDMQS 202

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
                 ++     +   S     W+  T   +    +RD +     L  ++   KL  F 
Sbjct: 203 DAVRCGLFVATALLLLASYMGCRWMLATRFGSVVLALRDAESRVRFLGYSVASYKLVVFV 262

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           VS+   G+AGA +      I+P  F+   +I +   V +GG  +L        I+     
Sbjct: 263 VSAMLAGLAGALYVPQVGIINPGEFQPLNSIEIAIWVAVGGRGTLHGAMLGAVIIAAAET 322

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           +        +   L              V  L 
Sbjct: 323 MLTARLPELWLFALGALFLLVTLLLPQGVAGLL 355


>gi|110680756|ref|YP_683763.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
 gi|109456872|gb|ABG33077.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
          Length = 377

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/355 (11%), Positives = 93/355 (26%), Gaps = 36/355 (10%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           N+   +  ++       +   L       +  ++  + L Y   A GL +  G+ G+LSL
Sbjct: 6   NRLFSLQDIIGFAILAAVIFILLPLALDTFRLNLFGKYLTYAFVAVGLVLCWGAGGILSL 65

Query: 69  NCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
              + + +G Y   +                       +                  +  
Sbjct: 66  GQGVFFGLGGYCMAMFLKLEASTPENTAIQSTPGIPDFMDWNQLTALPWWWEPFNNLAFA 125

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNG----------KAGIYVADRLYFLGTTVRSL 166
                                 +   +                I            +  L
Sbjct: 126 LFAVVAVPVIFAFIIGVAMFRRRVGGVYFAIITQAFAAILTILIIGQQGFTGGVNGITDL 185

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                +       +  +Y+V   + F    I  ++R++ +      +RD +         
Sbjct: 186 RTLNGWDIRTDEAKELLYFVNGILLFACLFIAQFVRKSKLGRLLIAMRDQEDRVRFSGYD 245

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +   K+  F + +AF G+ GA F      +SP +     +I ++    +GG  S+     
Sbjct: 246 VASFKIFIFCLGAAFAGIGGAMFTLQVGFMSPTLVGIVPSIEMVIFCAVGGRLSIIGAVY 305

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              ++                       +F       +      V+++  + L  
Sbjct: 306 GALLVNWAKTSLSE--------------TFPELWLLGLGGLFIAVVMLFPNGLAG 346


>gi|114766928|ref|ZP_01445849.1| branched-chain amino acid ABC transporter, permease protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114540906|gb|EAU43967.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. HTCC2601]
          Length = 569

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 72/203 (35%), Gaps = 13/203 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---RYGLSIWLLI 96
                   IY + A GL+I  G +G++++       +GAY+  ++      Y +S+ + +
Sbjct: 359 LDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQQIIPDYTVSLIVAL 418

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++  ++ A G+ M    +++   +  + TL+ +      L +      G     +    
Sbjct: 419 PLAFAVTFAAGVAMERLVIRW-LYHRPLETLLATFGISIALQQLAKNIFGTQARPLTSP- 476

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   S +      +  V        + +        I+L L +T +    R +  N
Sbjct: 477 --------SWLDGAWVLNDVVGIANIRIAIFILALIFLGLILLVLNKTRLGLEVRAVTQN 528

Query: 217 QKAFFSLNTTIIFAKLSAFAVSS 239
                S+        +  F + S
Sbjct: 529 PGMAASMGINPDKINMLTFGLGS 551


>gi|312111254|ref|YP_003989570.1| urea ABC transporter permease UrtB [Geobacillus sp. Y4.1MC1]
 gi|311216355|gb|ADP74959.1| urea ABC transporter, permease protein UrtB [Geobacillus sp.
           Y4.1MC1]
          Length = 299

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 90/309 (29%), Gaps = 18/309 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      I +  A GL++  G +G++++       +GAY   ++   +       +  
Sbjct: 8   IFNGFSLGSILLFVAIGLAVTFGLMGVINMAHGELIMVGAYMTYVVQQIFSKYAPQALEY 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +      +           L     +      ++L  W      +           
Sbjct: 68  YFFAAIPAAFFVSALLGWGVEQLL--IRHLYHRPLDSLLATWGVSLILQQIARTIFGAPN 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +       +       + V++     ++L+ +     ++ ++L +T      R +  N+ 
Sbjct: 126 VAVLPPGWLDG-GIRIAGVVFPYKRLFILVFVILSIFALYIYLTKTPAGRRIRAVTLNRD 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L  +       AFA+ S F G+AG                    +    +VILGG+
Sbjct: 185 MASCLGISTRKVDAYAFAIGSGFAGLAGCALTLLGPI--GPTIGTYYIVDAFMVVILGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L         +  V  L                         +M   +   +  +   
Sbjct: 243 GKLIGTVLGAFGIGLVSTLMEYSTSATIAK-------------VIMFALIIAFLQWKPSG 289

Query: 339 LLRLRTPSN 347
           L+ ++T S 
Sbjct: 290 LVSVKTRSL 298


>gi|332654585|ref|ZP_08420328.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Ruminococcaceae bacterium D16]
 gi|332516549|gb|EGJ46155.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Ruminococcaceae bacterium D16]
          Length = 294

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/295 (10%), Positives = 90/295 (30%), Gaps = 23/295 (7%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           Y + A G ++V G L L++      + +     + L + +   +++ +P+  +++   G 
Sbjct: 18  YALIAIGYTMVYGILRLINFAHGDVFMVAGLLGIYLSATFP--LYVAMPLVVILTVVLGF 75

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
            +   + K       ++ +I +     +L        G   +      +   T       
Sbjct: 76  CIERVAYKPLRSAPRMSVMISAIGVSYLLQNTATYVTGGQPMIYPSLPFLSDT------- 128

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                 +    +  +    + +  L   + L + RT +  A R +  + +    +   I 
Sbjct: 129 ---ITVAGTSIKWVVLLTPVLVVALVILLTLLINRTKVGMAMRAVAKDFETSQLMGIKIN 185

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
                 F + SA   +    +  +   +          +      + GG+ S+       
Sbjct: 186 SVISITFIIGSALAAIGSMLYFTTYSSV-VPTVGSMPGLKAFVAAVFGGIGSIPGAVIGA 244

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            ++         + F    + +                 L ++++ +   L   +
Sbjct: 245 FLIGICENFVKILPFEGATTFVD----------AFTFALLIIILVFKPTGLFGEK 289


>gi|296128563|ref|YP_003635813.1| urea ABC transporter, permease protein UrtC [Cellulomonas flavigena
           DSM 20109]
 gi|296020378|gb|ADG73614.1| urea ABC transporter, permease protein UrtC [Cellulomonas flavigena
           DSM 20109]
          Length = 409

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 50/347 (14%), Positives = 96/347 (27%), Gaps = 28/347 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +       + V    ++   L       +  ++  + L   M A G+ +  G  G+L L 
Sbjct: 29  RGPAARVWIGVAVAAVVLFGLAPAVLSDFRLNLLAKFLCLAMVAIGIGLAWGRGGMLVLG 88

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
             + + IG Y   +           +     +           P        LAI  L  
Sbjct: 89  QGVFFGIGGYLMAMHMKLSDAGPGGVPDFMLLYGDGVVPGWWEPFRSPVVTVLAIIVLPA 148

Query: 130 --------------SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                                ++           +    ++      +     FF +  +
Sbjct: 149 GIAALLGLAVFRRRVRGAYFAILSQALAAAFAILLVGQQKVTGGTNGLNGFRSFFGYDLA 208

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
             + +  +Y++  G+       +  L  +        +RD +     L       K+ A+
Sbjct: 209 DPVNKRMLYFIAAGVLIAMVVAVRLLMASRYGELLVAVRDQENRVRFLGYDPANVKVVAY 268

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
           AV++AF G+ GA FA     ISP       +I  +  V +GG  +L         +    
Sbjct: 269 AVAAAFAGIGGALFAPVVGIISPADVGVIPSIGFLVGVAIGGRATLLGPVLGAIAVSWAE 328

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                               F    T        +V+      L  L
Sbjct: 329 TGLSE--------------QFPSFWTYFQGALFIVVVAFLPQGLASL 361


>gi|182683670|ref|YP_001835417.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae CGSP14]
 gi|182629004|gb|ACB89952.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae CGSP14]
          Length = 292

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + ++ ++ + V
Sbjct: 8   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +       IA LI +     +L        G            
Sbjct: 68  AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGISFLLEYGMVYLVGAN---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+  R+    +        +L     L   + + +++T +  A R +  +  
Sbjct: 118 -TRAFPQAIQTVRYDLGPISLTNVQLMILGISLILMILLQVIVQKTKMGKAMRAVSVDSD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 177 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 236 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 282

Query: 339 LLR 341
           +L 
Sbjct: 283 ILG 285


>gi|110679438|ref|YP_682445.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
 gi|109455554|gb|ABG31759.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
          Length = 418

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 52/367 (14%), Positives = 105/367 (28%), Gaps = 37/367 (10%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +  +L L  +   +L   F     S  ++ ++G + L   + A  + +V G  G+LSL  
Sbjct: 23  FLGLLALFTLGVTILAEGFGIGVISTSFVKTLG-KTLCLCVVALAMDLVWGYCGILSLGH 81

Query: 71  VIAYAIGAYSYVILGSRYGLSIWL-------------------------------LIPVS 99
           +  + IG Y+  +        I +                                 P  
Sbjct: 82  MAFFGIGGYAIGMWLMYARTEIIVRESLANAPLPPTPQEISDGIAGQIFGVVGASEFPPI 141

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             ++ +  + +    +      L    L        + +         A      +    
Sbjct: 142 WAVAHSLPLQLAAVVVVPGLIALIFGWLAFRSRVTGVYLSILTQAMTLALALYLFQNDSG 201

Query: 160 GTTVRSLIRFFRFPSSF----VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                 L      P           ++ ++       L   I   +      +  R IRD
Sbjct: 202 LRGNNGLSGLQNLPGLSHVPQSTVSMWFFWASALALGLGYVICAAVVSGKFGSVIRAIRD 261

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++     L  ++   KL  F  ++    +AGA +      I+P       +I +   V +
Sbjct: 262 DEARVRFLGYSVEAYKLFIFTFTAILAAIAGALYYPQAGIINPAEIAPIASIYLAVWVAI 321

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG   L       A +  +     G      N    +   +    T L+ ++   V L  
Sbjct: 322 GGRGRLYGAVIGAAFVSLLSTWFTGGQAPDINLGF-YTIQWVNWWTILLGLSFVAVTLFA 380

Query: 336 SHSLLRL 342
              +  L
Sbjct: 381 PRGIGGL 387


>gi|296532056|ref|ZP_06894833.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
 gi|296267618|gb|EFH13466.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
          Length = 291

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 98/305 (32%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   ++ + + GL+++ G + L++        +G Y   +  ++ GL  ++L P 
Sbjct: 8   VLNGLMLGGLFAIISVGLTLIFGIIRLVNFAHGELLMVGMYLTWLGTTQLGLHPYVLAPP 67

Query: 99  SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             ++    G+++             A   +  +      LI    +  G           
Sbjct: 68  LVLVLFILGVLIQRFILQPLLEARDAHVQIFATVGLSTALINLALLVFGAD--------- 118

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                  S               +    + +    + +++ L++ R+ +  A R    ++
Sbjct: 119 --LYATPSSGVRDSLSFGPFRVMVGQLVMFVCGIAVVSALHLFMERSHLGRAIRATAQHR 176

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A   +   +    +  F + +A +G+A A  A            F        +V+LGG
Sbjct: 177 AAAQLMGVDVQRIYIVTFGIGAACVGLAAALVAPVYPASPTVGTYFVL--TAFVVVVLGG 234

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           M SL        ++  V  L                         ++     L++L R  
Sbjct: 235 MGSLHGAFLGAMLIGLVDSLSGYYI-------------APDLKEVVIFALFILILLFRPT 281

Query: 338 SLLRL 342
            LL L
Sbjct: 282 GLLGL 286


>gi|283780314|ref|YP_003371069.1| Monosaccharide-transporting ATPase [Pirellula staleyi DSM 6068]
 gi|283438767|gb|ADB17209.1| Monosaccharide-transporting ATPase [Pirellula staleyi DSM 6068]
          Length = 451

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 87/295 (29%), Gaps = 18/295 (6%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
             A    + + ++  QI +  + A G+++V+   G + L+     A+ A    ++ +R  
Sbjct: 145 WPAFLKSENLINITSQIAVISILAVGMTLVI-ISGGIDLSVGSLVALSA----VVMTRLI 199

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
                    S +    CG+   L           I  L+    F   L     +     G
Sbjct: 200 RDYAGAEQASTIGMVVCGLTAILVCAAVGAASGTIIALLKMPPFIVTLATMLIV----GG 255

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +            V   + +    ++ +     +  + +        +    +R+     
Sbjct: 256 LSFLISESKSINQVPPSLGWLGNGATLLGIPNCVVLMGVVFGVCELLL----QRSVFGRH 311

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              +  N +A            +  +A+  A  G+ G  +A+     +    +  E   +
Sbjct: 312 LYALGGNPRAAVLCGIRTERLLVVIYALCGALAGLGGVVYASQLRSGAATYGQDYELQTI 371

Query: 270 ISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            ++V+      GG  +L      + IL  +      +        +         
Sbjct: 372 AAVVVGGTSLSGGEGTLRGTLIGSLILGVIANGMNLLGLNTETQRIMLGLVILAA 426


>gi|253991196|ref|YP_003042552.1| branched-chain amino acid permease LivH [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253782646|emb|CAQ85810.1| high-affinity branched-chain amino acid transport system permeas
           protein livh (liv-i protein h) [Photorhabdus
           asymbiotica]
          Length = 308

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 94/312 (30%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   L        
Sbjct: 12  MLNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMLMGIDLGWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   S +I+   G  +   + +       +  LI +      L  +  ++ G    
Sbjct: 72  LITAAFLTSIVIASTYGWSIERVAYRPVRHSKRLIALISAIGMSIFLQNYVSLSQGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L + +                      + +        + +++R + +  A 
Sbjct: 129 ----RDLALPSLITGQWVLGESDGFSASITAMQLTIWIVTFLAMLVLTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMTSLLGINTDKVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L +
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVSEALTSAYLSTEYKDVVSF-------------ALLII 290

Query: 331 VILMRSHSLLRL 342
           V+L     +L  
Sbjct: 291 VLLFMPTGILGR 302


>gi|170741802|ref|YP_001770457.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168196076|gb|ACA18023.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 306

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 100/309 (32%), Gaps = 15/309 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     ++  + A GL++V G + L++L     Y +GAY              L     
Sbjct: 10  LNGVQLGILLFLVAAGLTLVFGVMDLINLAHGALYMVGAYLAAT----------LAGLTG 59

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           +   G    +    +     + L I  L   +    +L  +  I     G+ +      +
Sbjct: 60  SFGLGLLLALPASLAFGLLVEALVIRHLYERDHLDQVLATFGLILILNEGVRILWGNAPM 119

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +   +      +  + Y ++   ++      +  + L + RT +    R    +   
Sbjct: 120 SVALPEALSGAVPLTGTLRYPLYRVAIIAAGLAAALLLHLLVHRTRLGMQLRAGATHGPI 179

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   +       F + +   G AGA  A             S  I+   ++++GG+ 
Sbjct: 180 VAALGVDVRRLFRLVFGLGAVLAGFAGAMVAPILSV--DPGMGDSVLILTFVVIVIGGVG 237

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMRS 336
           S+     A+ I+    +L          SL++   +     T    L  I +  V+  R 
Sbjct: 238 SVRGAFVASLIVGLADQLGRSFGPILLRSLMEASAAAQTGRTLAPMLTYILMAGVLAFRP 297

Query: 337 HSLLRLRTP 345
             L   R  
Sbjct: 298 AGLFPARGR 306


>gi|76799156|ref|ZP_00781339.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae 18RS21]
 gi|77408298|ref|ZP_00785040.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae COH1]
 gi|76585486|gb|EAO62061.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae 18RS21]
 gi|77173061|gb|EAO76188.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae COH1]
          Length = 266

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 94/284 (33%), Gaps = 25/284 (8%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           +V G + L++      Y +GA+    L +   L+ +L + ++ + S   G+++   + + 
Sbjct: 1   MVYGIIKLINFAHGDIYMMGAFMGYYLINHLHLNFFLALLIAMLGSAFLGVVIEYLAYRP 60

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 IA LI +     +L        G                    I   ++    +
Sbjct: 61  LRKSTRIAALITAIGVSFLLEYGMVYLVGAD-----------TRAFPQAIHTVKYNLGPI 109

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                   +L     L  ++   +++T +  A R +  +  A   +   +       FA+
Sbjct: 110 TITNVQLIILGIALLLMLTLQFIVQKTKMGKAMRALSVDSDAAQLMGINVNRTISFTFAL 169

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            SA  G  G       + + P M   +  +      +LGG+  +   A    ++  +  L
Sbjct: 170 GSALAGAGGVLIGLYYNSVQPLM-GVTPGLKAFVAAVLGGIGIIPGAAIGGFVIGILETL 228

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              +               +     ++   L L+ L+R   +L 
Sbjct: 229 ATALG-------------VSDFRDGIVYAILILIFLIRPAGILG 259


>gi|254711901|ref|ZP_05173712.1| Bacterial inner-membrane translocator [Brucella ceti M644/93/1]
 gi|254714971|ref|ZP_05176782.1| Bacterial inner-membrane translocator [Brucella ceti M13/05/1]
 gi|261216665|ref|ZP_05930946.1| inner-membrane translocator [Brucella ceti M13/05/1]
 gi|261319534|ref|ZP_05958731.1| inner-membrane translocator [Brucella ceti M644/93/1]
 gi|260921754|gb|EEX88322.1| inner-membrane translocator [Brucella ceti M13/05/1]
 gi|261292224|gb|EEX95720.1| inner-membrane translocator [Brucella ceti M644/93/1]
          Length = 406

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 107/311 (34%), Gaps = 26/311 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                + + +  IQ+LI  +FA   S++ G  G+LS      + +G+++ V   + +G  
Sbjct: 20  PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHAMNAFGGE 79

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L  P+  +     G++ GL +  F      +   +++     +L    P   G  G  
Sbjct: 80  GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFGGE 139

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                + +                       +YY+ L     S  ++  L  T       
Sbjct: 140 AGVSSFRMPAW-----------GFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
           ++R+N      L   +       FA+S+ F G+AGA  A + +  +  +F+   +  V+ 
Sbjct: 189 SLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
              +GG+ +    A   A +     +   +   +                    +   LV
Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFSHVTSDVTRSW---------------LLYQGLIFVLV 293

Query: 332 ILMRSHSLLRL 342
           ++     L+  
Sbjct: 294 MMFLPRGLVGE 304


>gi|309779225|ref|ZP_07673988.1| amino-acid transmembrane ABC transporter [Ralstonia sp. 5_7_47FAA]
 gi|308922029|gb|EFP67663.1| amino-acid transmembrane ABC transporter [Ralstonia sp. 5_7_47FAA]
          Length = 302

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 56/302 (18%), Positives = 118/302 (39%), Gaps = 41/302 (13%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             ++ + + I  + A  + + + S GLL++       IGAY+  +L     +   + +  
Sbjct: 11  YSNLVLTLGINALLALSIYLTL-SCGLLAMANAAFMGIGAYTAALLTMNAEMPFSVALLG 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                    +++G P+L+  G YLA+ATL   E+ + +++  +  T G  G+    +L  
Sbjct: 70  GMAAPAVVAVVIGRPTLRLSGVYLAMATLGFGEVVRVLILNTENWTGGALGLNGIPQLTE 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                       +      +  ++  +RR+ +  A+  I++++ 
Sbjct: 130 WWH-------------------------VAVAVLATLFVLARMRRSKVGRAFEAIKEDET 164

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +   KL AF + +A  G+AGA  A     I P+ F F   + ++++ ILGG 
Sbjct: 165 AAGLMGINVAGTKLLAFTLGAAIAGLAGALNAHLTFFIGPNEFGFDRGVEILTMTILGGT 224

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L+     + IL  + EL      +                  +  + L +++L     
Sbjct: 225 NGLTGPVLGSLILSLLPELLRAFKDF---------------RLVVNGVILMVIVLFLPKG 269

Query: 339 LL 340
           + 
Sbjct: 270 IW 271


>gi|86158847|ref|YP_465632.1| chain amino acid ABC transporter inner membrane subunit
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775358|gb|ABC82195.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 288

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 91/289 (31%), Gaps = 13/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +   +Y +   GL+++ G + + +        +G Y   +  +   +  +L I +
Sbjct: 8   VLSGLLVGGVYALIGIGLTLIFGVMRVTNFAHGELLMLGMYLAWLAFTGLHVDPFLSIVL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A      G  +    +      L    ++++     I+     +               
Sbjct: 68  VAPAMFLWGAFLQKSFVNRVLGALPQNQILLTIGLGLIMSNTVMLI-----------FTS 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +      +  + +     + Y  L    ++ ++  +L +T    A R    ++ 
Sbjct: 117 DYRILTTTYSSSSYKLAGLSISQPLLYAFLITVAITGALYWFLLKTDTGQAIRATAQDRD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    + AF + SA  G AGA  + +          F+       IV+LGGM
Sbjct: 177 AAQLMGINVRRMSVLAFGIGSALAGTAGALISPTYYIFPQVGSTFTL--KAFVIVVLGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            S+        I+     L           L+ F     +       + 
Sbjct: 235 GSVVGATLGGIIIGVAESLSAVYIASGLKELVTFVLFLALLLFKPAGLL 283


>gi|170732743|ref|YP_001764690.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
 gi|169815985|gb|ACA90568.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
          Length = 409

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 107/336 (31%), Gaps = 27/336 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +   +                    +     Q    V+ A   ++ +G+ GLLS    
Sbjct: 4   RALAGCMRWALFAACVALPAWLWPHGAVLGYLAQTAALVVLALSYNLQLGTTGLLSFGHA 63

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               +GA++     +  G  + LL  V  M     G + GL + +  G   A+ TL + E
Sbjct: 64  AFAGLGAFAAAHWFNHVGGPLPLLPLVGGMAGAGFGFVAGLLATRRSGTAFAMITLGLGE 123

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                         G  G+ +                   + + +       Y V+   C
Sbjct: 124 CVAAAAWSVPAWFGGIGGVPI------------DRASGGPWGNGYFGAPAHAYAVIAAWC 171

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
             SA+ +  L RT ++     +RDN     +L T     +L+    +S F G+AG     
Sbjct: 172 VASAAAMHVLTRTPLARLANAVRDNPARVAALGTDPRRVRLAMVTCASFFAGVAGTLTLI 231

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
             +  +PD    + +  V+   ++GG  +    A   A+L  +     G++  +      
Sbjct: 232 DVELATPDSVSMARSATVLIAAVIGGTGAFLGPAAGAAVLTALSIGVAGVSRAW------ 285

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                       + +    +++     +  +     
Sbjct: 286 ---------ALYLGVLFVAIVVAAPGGIAGIARALA 312


>gi|116695945|ref|YP_841521.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113530444|emb|CAJ96791.1| ABC-type transporter, permease component: HAAT family [Ralstonia
           eutropha H16]
          Length = 294

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 97/297 (32%), Gaps = 8/297 (2%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           +IY M A G ++  G L ++  +      +GA++  +  S   +++ +  P   +++   
Sbjct: 1   MIYAMVAVGFTLFFGVLDVIKFSHGDVLMVGAFA-GLAASAGVVAMHVDSPWLQLLAIVV 59

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
             +     L      + I  L  +     +L      T  +  + +            +L
Sbjct: 60  CAVTVTGLLGAGIARVLILPLRRAPPLNTLLATLMLGTVLREAVRLFYPDGSNPKPFPAL 119

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
           +    F    +        +L     +   + L + RT    A R +  + +    +   
Sbjct: 120 LPAGEFTIGALSIRADNLILLAAGVAIILGVHLLITRTRFGMAIRAVAQDGETARLMGIN 179

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
                L  FA+ SA   +AG       + I+ ++      +I  +  ILGG+ ++     
Sbjct: 180 FEVVVLVTFALGSAMAALAGVMNGLYYNEINFNV-GLLLGVIGFAAAILGGLGNIYGAIL 238

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
              +   +  L   M       +       +          + +++  +   L+  +
Sbjct: 239 GGFLFAALQVLGSAMLPALVPDI------PSAYKDVFAFAVVIVLMAWKPTGLIAEK 289


>gi|322387415|ref|ZP_08061025.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus infantis
           ATCC 700779]
 gi|321141944|gb|EFX37439.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus infantis
           ATCC 700779]
          Length = 289

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 105/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L +   L+ +L + +
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFMGYFLINALHLNFFLALIL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S + S   G+I+   + +       I+ LI +     +L        G            
Sbjct: 65  SMIGSAILGVIIEFLAYRPLRHSTRISVLITAIGVSFLLEYGMVYLVGAN---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+  R+    +        +L     L   + L +++T +  A R +  +  
Sbjct: 115 -TRAFPQAIQTVRYDLGPISLTNIQLLILTVSIVLMILLQLIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  I      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GMTPGIKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|77411399|ref|ZP_00787746.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae CJB111]
 gi|77414834|ref|ZP_00790950.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae 515]
 gi|77159111|gb|EAO70306.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae 515]
 gi|77162572|gb|EAO73536.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus agalactiae CJB111]
          Length = 266

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 93/284 (32%), Gaps = 25/284 (8%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           +V G + L++      Y +GA+    L +   L+ +L + ++ + S   G ++   + + 
Sbjct: 1   MVYGIIKLINFAHGDIYMMGAFMGYYLINHLHLNFFLALLIAMLGSAFLGAVIEYLAYRP 60

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 IA LI +     +L        G                    I   ++    +
Sbjct: 61  LRKSTRIAALITAIGVSFLLEYGMVYLVGAD-----------TRAFPQAIHTVKYNLGPI 109

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                   +L     L  ++   +++T +  A R +  +  A   +   +       FA+
Sbjct: 110 TITNVQLIILGIALLLMLTLQFIVQKTKMGKAMRALSVDSDAAQLMGINVNRTISFTFAL 169

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            SA  G  G       + + P M   +  +      +LGG+  +   A    ++  +  L
Sbjct: 170 GSALAGAGGVLIGLYYNSVQPLM-GVTPGLKAFVAAVLGGIGIIPGAAIGGFVIGILETL 228

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              +               +     ++   L L+ L+R   +L 
Sbjct: 229 ATALG-------------VSDFRDGIVYAILILIFLIRPAGILG 259


>gi|254384242|ref|ZP_04999586.1| branched-chain amino acid ABC transporter permease [Streptomyces
           sp. Mg1]
 gi|194343131|gb|EDX24097.1| branched-chain amino acid ABC transporter permease [Streptomyces
           sp. Mg1]
          Length = 310

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 103/307 (33%), Gaps = 11/307 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY--SYVILGSRYGLSIWLLI 96
           + +      +Y + A G ++V G + L++      + IG +           G S+ + I
Sbjct: 8   LANGLALGALYGLIAIGYTMVYGIVQLINFAHGEIFMIGGFGALTAYAALPTGTSLLIAI 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P+  +      + +   + +F    L  A  +   I    L            ++     
Sbjct: 68  PIMIVGGALASVAVATAAERFAYRPLRSAPRLAPLITAIGLSIALQ-----QLVWQFYPD 122

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                +           +  +  +    +VL+       ++ ++++++    A +    +
Sbjct: 123 AKKAVSFPEFKGAAFKITDSLAIQRADAFVLILAPLCMLALGVFVQKSRSGRAMQATAQD 182

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 +        + AFA+ +AF  +A   +   + +I+ +M  F   +   +  +LG
Sbjct: 183 PDTAKLMGINTDRIIVMAFAIGAAFAAVAAVAYGLDKGQINFEM-GFILGLKAFTAAVLG 241

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++        +L     L                 +++     +++I + LV   R 
Sbjct: 242 GIGNIYGAMVGGVVLGLAEALSIAYIEDIPGMSQLGGGAWSNVWAFVLLIVVLLV---RP 298

Query: 337 HSLLRLR 343
             LL  R
Sbjct: 299 QGLLGER 305


>gi|295400899|ref|ZP_06810875.1| urea ABC transporter, permease protein UrtB [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294977162|gb|EFG52764.1| urea ABC transporter, permease protein UrtB [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 299

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 90/309 (29%), Gaps = 18/309 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      I +  A GL++  G +G++++       +GAY   ++   +       +  
Sbjct: 8   IFNGFSLGSILLFVAIGLAVTFGLMGVINMAHGELIMVGAYMTYVVQQIFSKYAPQALEY 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +      +           L     +      ++L  W      +           
Sbjct: 68  YFFAAIPAAFFVSALLGWGLEQLL--IRHLYHRPLDSLLATWGVSLILQQIARTIFGAPN 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +       +       + V++     ++L+ +     ++ ++L +T      R +  N+ 
Sbjct: 126 VAVLPPGWLDG-GIRIAGVVFPYKRLFILVFVILSIFALYIYLTKTPAGRRIRAVTLNRD 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L  +       AFA+ S F G+AG                    +    +VILGG+
Sbjct: 185 MASCLGISTRKVDAYAFAIGSGFAGLAGCALTLLGPI--GPTIGTYYIVDAFMVVILGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L         +  V  L                         +M   +   +  +   
Sbjct: 243 GKLIGTVLGAFGIGLVSTLMEYSTSATIAK-------------VIMFALIIAFLQWKPSG 289

Query: 339 LLRLRTPSN 347
           L+ ++T S 
Sbjct: 290 LVSVKTRSL 298


>gi|113867551|ref|YP_726040.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113526327|emb|CAJ92672.1| ABC-type transporter, permease component: HAAT family [Ralstonia
           eutropha H16]
          Length = 290

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 90/305 (29%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      IY + A GL+++ G L +++     A     Y    L +R  +  +  + V
Sbjct: 11  WLNGLTTGAIYALVALGLTLIYGVLHIVNFAHGAALMAALYGVYFLFTRLHVDPYAALLV 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                 A G ++    +           L+++     +L                     
Sbjct: 71  MLPAMFAAGYLLQRHLIARASRGNEQNVLLVTLGISIVLENLALYLFRSD---------- 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+ +               +       G       ++L +RRT +  A R +   ++
Sbjct: 121 -TYTIDTPYALSTVELLGASIALPKVIAFAGALLACGLLMLMIRRTTLGRAIRAVAREKQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +      +F +  A +G A  F   +          F    I  ++V+LGGM
Sbjct: 180 GARVVGIDVERVYALSFGIGLACLGAAACFLLPAYYVNPRVGDGFVL--IAFTVVVLGGM 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +       ++  V  L           +              + +   LV+L R   
Sbjct: 238 GSFAGALWGGLLIGVVESLGGLWLGDSLGQVG-------------IFLIFILVLLFRPQG 284

Query: 339 LLRLR 343
           L   +
Sbjct: 285 LFGAK 289


>gi|170694148|ref|ZP_02885303.1| inner-membrane translocator [Burkholderia graminis C4D1M]
 gi|170140888|gb|EDT09061.1| inner-membrane translocator [Burkholderia graminis C4D1M]
          Length = 291

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 97/304 (31%), Gaps = 29/304 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIP 97
           + ++   + I V+ A GL+IV G + +++L       IGAY+   +       + WL + 
Sbjct: 4   VLNILSYVSILVLVALGLAIVFGMMDIVNLAHAEWVTIGAYTLAVVQAVGGLQAFWLALL 63

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            + ++       +    ++   D      L    +   +    + +              
Sbjct: 64  AAPIVGALLAWCLERFIIRLLYDRPLDTLLATYAVGLILRKALELVFG------------ 111

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                +         P     Y  +  +V+     ++A   L   RT      R +  ++
Sbjct: 112 -NQPMLVYAPFATAVPVPGGNYPAYRIFVVGVAFAVTAGCWLIFARTRFGTQLRAVIQHR 170

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               ++          AF   +A   +AG   A      S      +       +++LGG
Sbjct: 171 AMAEAVGIDTRRLNRIAFCGGAALASLAGVLIAPMVSVESH--LGVAYLAKAFFVIVLGG 228

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S++     + ++     L        F+S              L++I   +VI  R  
Sbjct: 229 IGSIAGSILGSVVIGSAETLLSYRLDPSFSSA-------------LVLILSIIVIRFRPQ 275

Query: 338 SLLR 341
            L+ 
Sbjct: 276 GLVP 279


>gi|241765515|ref|ZP_04763478.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
 gi|241364699|gb|EER59718.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
          Length = 287

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 86/302 (28%), Gaps = 27/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A GL++V G L + +      Y +GA+    L S +G + W+ +  
Sbjct: 8   VLNGLTLGGIYSLVALGLTLVYGILHVPNFAHGAFYMVGAFVSFHLMSAWGWNYWVAMAG 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           SA       M+              +  +I +      L        G     +      
Sbjct: 68  SAACVAVLAMLAERLVFHPLRHASGLHPMIAAIGVLLFLEASAQAIWGADFQRMQTP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V   +    ++     L  ++  +L++T + +    +  N+ 
Sbjct: 125 ---------YTGIIDLGGVTAPVQRLLIIGAAFALVVALHFFLKKTVMGSTIIAMAQNRD 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        +  FA+S      A   +A     +               I+ILGGM
Sbjct: 176 GASLVGIDANRVAMLTFAISGVLAAAAATLYAP--INLVYPAMGNLVITKAFVIIILGGM 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+                               +  + L +++ +R   
Sbjct: 234 GSVPGAIVGGLIIGFAESFGAYYIS-------------TDYKDIMAFVLLVVILSLRPQG 280

Query: 339 LL 340
           L 
Sbjct: 281 LF 282


>gi|229492742|ref|ZP_04386543.1| ABC branched chain amino acid transporter, permease component
           [Rhodococcus erythropolis SK121]
 gi|229320401|gb|EEN86221.1| ABC branched chain amino acid transporter, permease component
           [Rhodococcus erythropolis SK121]
          Length = 453

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 90/304 (29%), Gaps = 23/304 (7%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               L+  +   GLS++ G+ GL +        +GA +  ++ + +G    + +  + ++
Sbjct: 170 LRFGLVIAIAGVGLSLIYGTTGLTNFAHGEMVTLGAVAAWVINTSFG----VPLIPATIL 225

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +   G+ +GL +       L      +       +     +        +          
Sbjct: 226 AIFVGIGIGLLTNGIVWKPLRKRKTGLIAQLVVSIGLAISLR-----YLILIFFSDRAEP 280

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                         +        V++    +   + L L++T I  A R + DN+    S
Sbjct: 281 FDDYQGQVEKNWGPIALTDANAIVMIVSLVVLVGVALLLQKTRIGKAMRAVSDNRDLAAS 340

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAAS-RDRISPDMFKFSENIIVISIVILGGMTSL 281
               +    +  + +      + G  F  S           F   +++ + + LGG+ + 
Sbjct: 341 SGINVERVIMFVWGLGGGLAALGGVLFGISELGGRVQWEMGFKLLLLMFAGITLGGLGTA 400

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   I+  +V+L   +       +        +                R   +L 
Sbjct: 401 YGALLGCVIVGLLVQLSTLIINPDLKYIGGLLVLIVILVV-------------RPQGILG 447

Query: 342 LRTP 345
            R  
Sbjct: 448 SRQR 451


>gi|118474101|ref|YP_891602.1| hydrophobic amino acid ABC transporter permease/ATP-binding protein
           [Campylobacter fetus subsp. fetus 82-40]
 gi|118413327|gb|ABK81747.1| ABC transporter, hydrophobic amino acid uptake transporter (haat)
           family, permease protein [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 298

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 96/303 (31%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++        +GAY+ +   +   L     +  
Sbjct: 10  MVNGFSLGSMYALIAIGYTMVYGVLRLINFAHGDIMMVGAYAALFSMTSLSLPFGFALLF 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  ++   G+     + K       I+ LI +     +L     +  G          YF
Sbjct: 70  AITVAIILGVFTDRIAYKPLRKAPRISLLITAIGISFLLENVFQVIFGGTPRSFPVPSYF 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +          I  +F+  V+L + +          RT    A R +  +  
Sbjct: 130 EQLVTIGSVNLAMTAILVPIITLFLLSVVLFILY----------RTKYGMAIRALAFDIS 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           FA+ S+   + G F+A +   I P M      +   +  +LGG+
Sbjct: 180 TVHLMGIDANMIISIVFALGSSLAAIGGVFWALNYPSIDPLM-GVLIGLKAFAAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+     +   +          F             I L LV+L +   
Sbjct: 239 GSVGGAVLGGFIIGFTEVVAVALFPDLAGFKDAFA-----------FIFLILVLLFKPTG 287

Query: 339 LLR 341
           +L 
Sbjct: 288 ILG 290


>gi|293603308|ref|ZP_06685736.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292818218|gb|EFF77271.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 309

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 54/319 (16%), Positives = 116/319 (36%), Gaps = 26/319 (8%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
            L         ++   +      +Y +FA G +++ G LG+++L     + +GAY+ + +
Sbjct: 8   ALIDLESPIMFEQQFVNALSLGCVYALFALGFTLIFGVLGVINLAHGAVFMVGAYAALFV 67

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKP 142
              +GL +W  + V+  ++G  G+I+         + +   +  +I +     IL     
Sbjct: 68  VQHFGLPLWAALMVAFFVAGFTGVIIDYLVLKPLRKRNAPHLIPMIATIGVGIILNNGAQ 127

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
              G + +                +       + +   +    ++     L A ++  +R
Sbjct: 128 SIFGASNLRFPH----------GTVPEEVIEVAGLHLTVIELGIIFLSFALMAVLMYVMR 177

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           RT    A R I ++ KA + L   +    ++    ++A  G+AG       + + P M +
Sbjct: 178 RTQFGRALRAIAESPKAAWLLGINVEKLFVTTSFAAAALGGVAGVLIGLYSNALFPLMGQ 237

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
              +  + +++ILGGM  +         L     L            + F          
Sbjct: 238 PMLHKGI-AVIILGGMGDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG--------- 287

Query: 323 LMVIALFLVILMRSHSLLR 341
                LFL++L+R   L  
Sbjct: 288 ----LLFLILLVRPQGLFG 302


>gi|311895444|dbj|BAJ27852.1| putative branched-chain amino acid ABC transporter permease protein
           [Kitasatospora setae KM-6054]
          Length = 309

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 97/310 (31%), Gaps = 12/310 (3%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY--SYVILGSRYGLSIW 93
            + + +  +  L+Y + A G ++V G + L++      + IG +           G S+W
Sbjct: 5   PQNLANGLMLGLMYGLIAIGYTMVYGIVQLINFAHGEIFMIGGFGALTAYAALPQGTSLW 64

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L +PV  +      ++    + +F    L  A  +        LI    ++     +  A
Sbjct: 65  LALPVMILGGVLASVLTATAAERFAYRPLRGAPRLAP------LITAIGLSIALQQVVWA 118

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                                     +    ++L         +  ++R T    A +  
Sbjct: 119 FYPDGKKALSFPQFAGDPIGLGAFHLQRNDLFLLAAAPLCMLVLATFVRLTRTGRAMQAT 178

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             +      +        + AFA+ +AF  +A         ++   M  F   +   +  
Sbjct: 179 AQDPDTAKLMGVDTDRIIVIAFALGAAFAAVAAVAHGLRYGQVDFTM-GFLAGLKAFTAA 237

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ ++        +L     L                 ++      +++I + LV  
Sbjct: 238 VLGGIGNIYGAMLGGLVLGIAESLATAYIQDVPGMHQLGGGAWANVWAFVLLIVVLLV-- 295

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 296 -RPQGLLGQR 304


>gi|166368929|ref|YP_001661202.1| inner-membrane translocator [Microcystis aeruginosa NIES-843]
 gi|166091302|dbj|BAG06010.1| inner-membrane translocator [Microcystis aeruginosa NIES-843]
          Length = 316

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/319 (14%), Positives = 103/319 (32%), Gaps = 31/319 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG------------- 85
           + +      +Y +FA G +++   LG+++      + +GAY    L              
Sbjct: 10  VLNGLSIGSVYAIFALGYTLIFSILGIINFAHGAIFTLGAYFTYALAGGVFGFNGLLANA 69

Query: 86  -SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
              + L  +L + +  ++SG   +++   + K      + + L +       ++    I 
Sbjct: 70  KLPFSLPFFLALLLGCILSGFTSVLLERLAFKPLRVRGSDSLLTLVSSLGAAVVIVNVIQ 129

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                                    F      V        + L    + A +  W+  T
Sbjct: 130 Y--LFGAEIYTFPDGIYGNLPPAINFGTADRPVAIRTIQIIIFLVSAVMVALLTYWVNFT 187

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            +  A + + ++      L        +  F +S A  G+AG    +S   I+   F  +
Sbjct: 188 KMGKALQAVAEDVTTASLLGINPEKFIVITFFISGALAGLAGTLVGSSV-SIAGPYFGIA 246

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
             +  + +++LGG+ S+        +L                        ++     + 
Sbjct: 247 FGLKGLGVIVLGGLGSIPGAVIGGLLLGIAEAFV--------------PAEYSGYREAIA 292

Query: 325 VIALFLVILMRSHSLLRLR 343
              LF+++L+R   LL  +
Sbjct: 293 FAILFIMLLVRPQGLLGRK 311


>gi|292654118|ref|YP_003534016.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haloferax volcanii DS2]
 gi|291369856|gb|ADE02084.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haloferax volcanii DS2]
          Length = 321

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 101/303 (33%), Gaps = 28/303 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   +Y + A GL+++ G + +++    I   +G YS  ++    G+S +L IP++A +
Sbjct: 47  LLLGGVYALTALGLTMIFGVMDVINFAHGIFLVVGMYSVWLVSETAGISPFLGIPIAAAV 106

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
             A G+++ + +++   +      LI +     I+     I        V          
Sbjct: 107 LFALGVVVHILTVEPIIEAPQQNQLIATLGVLFIIQSAIEIVFTPDPQQV---------- 156

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +         V   +  +Y L+       ++  +L RT +    R   DN+     
Sbjct: 157 ---ELSLGSVQVGDVFIPLGQFYALVIALGTMLAVRAFLNRTDLGRKIRGTADNRDGARY 213

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +       F + +A  G+AG   A  +         +   I    IVILGG+ S  
Sbjct: 214 VGINVRRINYLTFGIGAALAGVAGGSIALFQRFDPFTGETYL--INAFVIVILGGLGSFP 271

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  I+  +                            L+ +     +L++   L   
Sbjct: 272 GAFVGGLIVGMIQVFGGYYLP-------------GTTAQVLIFLLFIGTLLVKPEGLFGG 318

Query: 343 RTP 345
              
Sbjct: 319 AEA 321


>gi|256111132|ref|ZP_05452168.1| hypothetical protein Bmelb3E_00831 [Brucella melitensis bv. 3 str.
           Ether]
 gi|265992643|ref|ZP_06105200.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether]
 gi|262763513|gb|EEZ09545.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether]
          Length = 331

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 130/337 (38%), Gaps = 33/337 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +   L+  +         +     +++L + +FA   ++++G  G+LS      +
Sbjct: 25  LSAIVLGIALVGLIATPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 80

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              AY        +G+S  L + +  + + A G+++G  +++ +G Y  + TL ++++F 
Sbjct: 81  GAAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              ++                       ++ + R F F    +   + MYY +L +  L 
Sbjct: 141 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              I  +  +      +++R+N+    SL  ++   KL+AF +S+   G+AG   A    
Sbjct: 187 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 246

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             +     +  +  VI + +LGG+ +L       A ++ +       +F           
Sbjct: 247 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 297

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 T +  +     +L+    ++     S   ++
Sbjct: 298 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 328


>gi|268325973|emb|CBH39561.1| putative high-affinity branched-chain amino acid transport system
           permease protein livM [uncultured archaeon]
          Length = 278

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 54/284 (19%), Positives = 118/284 (41%), Gaps = 17/284 (5%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
           +L++ M++   +++  + G  SL     + IG Y   I+ + +GL + L I +    +  
Sbjct: 1   MLVFTMYSSAWNLLA-TSGQGSLGHAAFFGIGGYVSAIISNSFGLPVILTIIIGGFFAAV 59

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
            G+++GL  ++ +  +LA+ T   + I Q + ++   +T G  GI               
Sbjct: 60  IGVLIGLTCVRLKAWFLAMVTFGFAIIVQTVTVELSGLTGGWDGIPA------------- 106

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                  P +   + ++ YY++L +  +   II  + ++ +  A   IR+N+     +  
Sbjct: 107 ---KKLVPVTITNHVMYEYYIILLIAVVVIVIIYLIMKSKMGLALEAIRENELEAKVMGI 163

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
            +   KL AFA S+ F G+AGA        ++P+++    +   I   + GG+ ++    
Sbjct: 164 NVTVYKLKAFAASAFFTGIAGALEIHHFGYVTPEVYGIDISFWPIIYSVSGGLYTIGGPI 223

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             T ++  + E+       Y   +L       +       +   
Sbjct: 224 LGTVVITAIWEVLRSFGMTYGRFILIGLILILIVIFLPKGLISI 267


>gi|152997218|ref|YP_001342053.1| inner-membrane translocator [Marinomonas sp. MWYL1]
 gi|150838142|gb|ABR72118.1| inner-membrane translocator [Marinomonas sp. MWYL1]
          Length = 331

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 56/320 (17%), Positives = 117/320 (36%), Gaps = 24/320 (7%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L+    +          ++  +ILI+ + A   ++++G  GLLS    I +  GAYS 
Sbjct: 11  ITLIALALIVVMPIILPSVTLATEILIFALAALACNLLLGYTGLLSFGQGIFFGGGAYSA 70

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            ++       ++  +  + +      +I+G  S++  G Y  + TL  +++   +   + 
Sbjct: 71  SLVMLHLDFGLFGALITAIIAGALLALIVGALSIRRSGIYFVMLTLAFTQMAYFLAYTFS 130

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
             T G  G+    R           + FF    S +      Y  +  +  +       +
Sbjct: 131 DWTGGDNGLLDVPRPE---------LNFFGLTISELKSSEDFYIFVAALFSIVFIFARRV 181

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +        IR+N+    ++  +    KL AF +S A  G+AGA +A   +       
Sbjct: 182 IHSPFGTTLVAIRENENRSSAVGFSTNHFKLIAFVISGAITGLAGALYAMLLNFSPLSNI 241

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
               +  ++ + I+GG +SL         ++ + +L   +   +                
Sbjct: 242 DLVMSENILIMTIIGGTSSLIGSILGAGAIVLIGDLLSSIWPRW---------------M 286

Query: 322 TLMVIALFLVILMRSHSLLR 341
            ++ IAL  V+L     L  
Sbjct: 287 MILGIALIAVVLFLPGGLWG 306


>gi|91780478|ref|YP_555685.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693138|gb|ABE36335.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 291

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 50/304 (16%), Positives = 101/304 (33%), Gaps = 29/304 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-LGSRYGLSIWLLIP 97
           I ++   + I ++ A GL++V G + +++L       IGAY+  I        + WL + 
Sbjct: 4   ILNILGYVSILMLVALGLAVVFGMMDIVNLAHAEWVTIGAYALAIAQAVGGQQAFWLALV 63

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           V+  +  A G  +    ++   D      L+ +     IL K   +  G   + V     
Sbjct: 64  VAPAVGAALGWCLERFIIRLLYDRPLDT-LLATYAVSLILQKVLELIFGTQPMLVYAPFS 122

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +             P     Y  +  +V+     ++A   L    T +    R +  ++
Sbjct: 123 GV------------VPVPGGSYPAYRIFVIGVALTVTAGCWLLFACTRVGTQLRAVIQHR 170

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +           AF   +    +AG   A      S      S       +++LGG
Sbjct: 171 AMAEATGIDTRRLNRIAFCGGAGLASLAGVLVAPMVSVESH--LGVSYLAKAFFVIVLGG 228

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S++     +A++     L          S              ++++   +VI  R  
Sbjct: 229 IGSIAGSILGSAVIGTAETLLSYRVDPSLASA-------------MVLVLSIVVIRFRPQ 275

Query: 338 SLLR 341
            L+ 
Sbjct: 276 GLIP 279


>gi|91789176|ref|YP_550128.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91698401|gb|ABE45230.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas sp. JS666]
          Length = 334

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 57/288 (19%), Positives = 108/288 (37%), Gaps = 9/288 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   L+  LFL    +  Y  ++ I    Y +   G +++ G  G LS    +  AIGA
Sbjct: 23  VIFAVLVAALFLAPQVADSYHLTLMIPFFGYSIVLLGFNLLFGYGGQLSFGHAMFVAIGA 82

Query: 79  YSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           Y            S+ L++ VS   S    + + L + +F G +  + TL    +F + L
Sbjct: 83  YGAAGAARWMGVASMELMLLVSVCASIVIALPIALIASRFTGIFFGMLTLSFGMLFHSFL 142

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            K+  IT G++G+ V                               YY +L +C + A +
Sbjct: 143 FKFYDITGGESGMRVPRPSLLGKVFEDLDKT--------AFLVGPFYYYVLVICLVLAWL 194

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  +  +         RDN      +   I   +  AF +S+A+  + G   + S     
Sbjct: 195 MWRVVHSPFGLHLMASRDNPSKAAYVGVKIRAVRTVAFVISAAYGAVGGVVLSVSTGLAD 254

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           P++  ++ +  ++ + +LGG              I + +L      Y+
Sbjct: 255 PELAYWTHSGHIVFMAVLGGYQEFFGPVVGAFGFILMQDLLMSATQYW 302


>gi|307298792|ref|ZP_07578594.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915217|gb|EFN45602.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 313

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 93/312 (29%), Gaps = 18/312 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +   +      +Y + A G ++V G L L++      + +  Y  +   +   L  +L  
Sbjct: 8   QNFINGLSLGSLYALIAIGYTMVYGILRLINFAHGDIFMMAVYFALFFVTLAQLPWYLAA 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++   +   G  +   + K   +   I+ LI +      L     +             
Sbjct: 68  ILAVACAALLGFTVDRIAYKPIRNAPRISALITAIGVSFFLESLAVVVFSGIPRSFRTIF 127

Query: 157 YFLGTTV------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                 +        +          + + +     L+        +  ++ +T +  A 
Sbjct: 128 PQSLNEMIIIGGEMEVKYGREVIVGGIRFPVISLITLIVAAIALVFLWWFIFKTKVGMAM 187

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +  + +    +   +       FA+ SA  G+ G  +A    ++ P M  F   +   
Sbjct: 188 RAVSLDIQTTSLMGVNVDRVIGMTFALGSALAGIGGILWAIRYPQVWPYM-GFIPGMKAF 246

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
              + GG+ S+        IL     +  G+                          L +
Sbjct: 247 VAAVFGGIGSVPGAVLGGLILGITEVMMVGIMP-----------GAAGYRDAFAFFILII 295

Query: 331 VILMRSHSLLRL 342
           V+ ++   LL  
Sbjct: 296 VLSIKPSGLLGR 307


>gi|323356625|ref|YP_004223021.1| branched-chain amino acid ABC transporter permease [Microbacterium
           testaceum StLB037]
 gi|323272996|dbj|BAJ73141.1| ABC-type branched-chain amino acid transport system, permease
           component [Microbacterium testaceum StLB037]
          Length = 325

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 56/302 (18%), Positives = 110/302 (36%), Gaps = 19/302 (6%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +  +Q  +  +   GLS+ +G  G  SL      A+G  +  +     G+   L + V+ 
Sbjct: 24  TFFVQTALTALVVTGLSLFMGYAGQASLGQGAFVAVGGLTVAVGTVTLGIPPLLALIVAP 83

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           ++      ++G P L+ RG YLA  +L +  I Q ++        G     +        
Sbjct: 84  VLGALVAALVGWPLLRLRGHYLAFGSLAVLLIIQTVMATAPLFGAGVGIFGIPPL----- 138

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                           V  +    YV L     +  +   L R+      R +  ++ A 
Sbjct: 139 ----------SVAGFVVPDQRVYSYVALAALAAALVVCHNLVRSRFGRGIRALAGSESAA 188

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            S    I+ +KL+ FAV+  F G AGA  A     +S D +    +   + + ++GG+ S
Sbjct: 189 ASSGVPILRSKLTVFAVAGGFAGFAGALGAFFTPYVSQDTYPPFASFGYVVMAVVGGLGS 248

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +      T  L   +++   ++     +      +  +       I L + +L     ++
Sbjct: 249 VWGGVVGTLALSLWLQVLSALS----ATPGMPAAAGPILQYAGYGIVLVVFLLFVPRGIV 304

Query: 341 RL 342
             
Sbjct: 305 PT 306


>gi|237728771|ref|ZP_04559252.1| inner-membrane translocator [Citrobacter sp. 30_2]
 gi|226909393|gb|EEH95311.1| inner-membrane translocator [Citrobacter sp. 30_2]
          Length = 308

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDSSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +       +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ L++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWTVGSSDNFSASITTMQLVIWIVTFLAMLALTLFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|158424816|ref|YP_001526108.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158331705|dbj|BAF89190.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 306

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 95/308 (30%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     +I  + A GL++V G +  ++L   + Y IGAY   +  +  G     LI  
Sbjct: 10  LLNGLQFGVILFLVAAGLTLVFGVMDFINLAHGVQYMIGAYLVAVATASTGNFAIGLITG 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                    ++  L              L    +   +    + +       +       
Sbjct: 70  LFGALVLGVVLETLVFRHLTRKDHLDQVLATFGVILVVTELARIVFGAAPIAFPIPAALS 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+             ++Y ++   +L     ++  +   + RT +    R    + +
Sbjct: 130 GAVTLMP----------GLVYPVWRLVILAAGVGVAVLLWYLVTRTRLGMLVRAGSTHPQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +     + FA  +   G+AGA                   I+   ++++GG+
Sbjct: 180 TVAALGVDVDRLFRAVFAFGAVLAGLAGAMAGPLVSV--EPTMGDRILIVAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLK---FDCSFNMRHTTLMVIALFLVILMR 335
            S+     A  I+  V  L           L+       +     +  + + +  V+  R
Sbjct: 238 GSIKGAFVAAIIVGLVDTLGRAFAPELLKLLIGRSAAAAAGPALSSMAIYLLMAAVLSFR 297

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 298 PTGLFGGR 305


>gi|296136031|ref|YP_003643273.1| inner-membrane translocator [Thiomonas intermedia K12]
 gi|295796153|gb|ADG30943.1| inner-membrane translocator [Thiomonas intermedia K12]
          Length = 289

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 90/305 (29%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A GL++V G L + +      Y +G Y    L ++ GL  W  +  
Sbjct: 8   LFNGLTLGAIYGLVALGLTLVYGVLHVPNFAHGALYMVGGYVAYTLVNKLGLEYWWAMLG 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +     M+M             +  +I +      L        G     +      
Sbjct: 68  AGAVVALLAMLMQALVFAPLRRAPELYNMIGAIGVMLFLEATAQFIWGADFHRLPTP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                           + + + +    +++ + FL   + L+L R+   +    +  + +
Sbjct: 125 ---------YGQVLEIAGMPFPLQRLLIVVAVLFLVVLLHLFLTRSVTGSTILAMAQDPQ 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           FA+S     +A   +A     +          +    I+ILGGM
Sbjct: 176 GAALVGIDAQRVTYLVFAISGVLAAVAATLYAP--INLLYPTMGNLVIVKAFVIIILGGM 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         I+                         +     +  + L  ++ +R   
Sbjct: 234 GSFPGAILGGLIIGIAESFGGFYVS-------------SDYKDIIAFVLLVAILSVRPQG 280

Query: 339 LLRLR 343
           LL  R
Sbjct: 281 LLTHR 285


>gi|260462821|ref|ZP_05811026.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259031465|gb|EEW32736.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 346

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 68/328 (20%), Positives = 132/328 (40%), Gaps = 16/328 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  V+     +  +    S    +++ +  L   +   GL+I+ G  G +SL      A 
Sbjct: 18  LAPVLLLAFAYGVVPLIGSSYLFEAILLPFLALSLAGVGLNILTGYAGQVSLGSAAFMAA 77

Query: 77  GAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GA++      R      +  I ++ +++ A G++ GLPSL+ +G YLA++TL      Q 
Sbjct: 78  GAFAAYNFNLRVEGLPLIGSIVLAGLVAAAIGIVFGLPSLRLKGFYLAVSTLAAQFFVQW 137

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L K+   +N  A   +                        +   +  Y   L +  +  
Sbjct: 138 ALTKFSWFSNNSASGVIDAPRL-------------SISGFALDGAVGRYLFALTIVAVLT 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254
            +   L  +     +  IRDN+ A   +   ++  KL AFA+SS  IG+AG  +A A   
Sbjct: 185 FLAHRLVSSQTGRNFIAIRDNETAARIIGIPVLKTKLLAFAISSFIIGVAGVIWAFAYLR 244

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            + PD F    +  ++ I+I+GG+ S+       A+++        +  +    +     
Sbjct: 245 TVEPDGFDLDRSFQILFIIIIGGLASVRGAFFGAALIVVFPLGLSRLGGFLLGDVFDSGV 304

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
             +M    ++   + L +++    L+ L
Sbjct: 305 -LDMSQRIVLGALIILFLILEPDGLVAL 331


>gi|56476957|ref|YP_158546.1| ABC transporter permease protein [Aromatoleum aromaticum EbN1]
 gi|56313000|emb|CAI07645.1| ABC transporter permease protein [Aromatoleum aromaticum EbN1]
          Length = 321

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 63/325 (19%), Positives = 126/325 (38%), Gaps = 20/325 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             ++   +L          +Y+ +    +  Y +   G+ +VVG  G + L       +G
Sbjct: 12  AGMIGLAMLGALALRALGPEYVLAQAAFVFTYAIAGLGVVLVVGQCGQIPLGQGALLGLG 71

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  +L      +  L +P++ ++  A G    LP+ +  G Y A++TL  + I +  L
Sbjct: 72  AYAETLLALHGVPAP-LSLPLAIVLGAAGGWFASLPAQRLGGLYFAMSTLAFALIVEEAL 130

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++W+ +T G AG+ V                                 + L    L+   
Sbjct: 131 VRWESLTGGAAGLAVPTMTLGSW---------------SADTAAAQATLSLVALVLAWFA 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
                 + +  AWR +R+++ A  +    +  AK+ AF +     G+AGA +A     +S
Sbjct: 176 CRRWVASRLGRAWRAVREDETAAAASGIDLGRAKMLAFVLGGGLSGLAGALYAHWIGFVS 235

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+ F  + +  ++ +V +GG   L+       ++IG+ +     +      L        
Sbjct: 236 PEQFGLALSFELLMLVFIGGARRLAGALWGALVVIGIPQAISLASEVLPPHLAA----AA 291

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
              T L    +  V+++R   L   
Sbjct: 292 GLETLLFGAVVVAVVVLRPEGLAGR 316


>gi|148548195|ref|YP_001268297.1| inner-membrane translocator [Pseudomonas putida F1]
 gi|148512253|gb|ABQ79113.1| inner-membrane translocator [Pseudomonas putida F1]
          Length = 355

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 63/337 (18%), Positives = 129/337 (38%), Gaps = 16/337 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L      L  F+ +    +  +  ++ I  L+  +   GL+++ G  G LSL      A+
Sbjct: 27  LGLAALVLFAFIGVPLLGNDYWFSAILIPFLLLSLAGLGLNLLTGYAGQLSLGSAAFMAV 86

Query: 77  GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GA++          L +   + +  +++    ++ GLPSL+ +G YL ++TL        
Sbjct: 87  GAFAAYNFELRVAWLPLLASLLLGGLVAALVAVVFGLPSLRIKGFYLLVSTLAAQFFVPW 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L ++   +N  A   ++     +     S                  Y + L +     
Sbjct: 147 ALTRFSWFSNDSASGVISAPPLLMAGYDFS-------------SPAGRYMLTLAVVSALF 193

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRD 254
            +   L R+ +   W  +RD   A   +   ++  KL AFA+S  ++G+AG+ +A     
Sbjct: 194 WLGANLVRSELGRNWMAVRDMDTAAAVIGIPLLKTKLLAFAISGFYLGVAGSLWAFTYLG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            + P  F  + +  ++ I+I+GG+ S+       A ++    L   +       L+    
Sbjct: 254 TVEPHGFDLNRSFQILFIIIIGGLGSILGNFLGAAFIVLFPVLLSNLAGLLPTGLIDAGQ 313

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             N++        + + ++     L RL        R
Sbjct: 314 IENLQKMA-FGTLIIIFLIKEPEGLARLWQRFRERTR 349


>gi|260434384|ref|ZP_05788354.1| urea ABC transporter, permease protein UrtC [Synechococcus sp. WH
           8109]
 gi|260412258|gb|EEX05554.1| urea ABC transporter, permease protein UrtC [Synechococcus sp. WH
           8109]
          Length = 375

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/344 (12%), Positives = 94/344 (27%), Gaps = 31/344 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             L+ +   ++  +    +    +  ++  + L   + A G+ ++ G  GLLSL   I +
Sbjct: 10  WPLIILWVVIVAAIVAAPSVLPVFRLNLLGRFLSLAIVALGIDLIWGFTGLLSLGQGIFF 69

Query: 75  AIGAYSYVILGSR------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           A+G Y   +                           A       P       +L  A L 
Sbjct: 70  ALGGYVAAMYLQLNSSGDLPNGIPEFFGLYGVNRLPAFWEPFHSPLFTLVAIWLVPAVLA 129

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV-----------RSLIRFFRFPSSFV 177
                     + K +             +                   + + F       
Sbjct: 130 AVLGNLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDVTQLFGQMVGSP 189

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
             +   +++   +  L+   + W+ R    +    IRD++             K   FA+
Sbjct: 190 EMQRGFFWLTSVVVILAWLFLRWVVRGRFGDVLIAIRDDEPRLRFAGYNPTLFKTIVFAI 249

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           +    G+ GA +      +SP       +I ++  V +GG  +L        ++     L
Sbjct: 250 AGGLAGIGGALYTVQSGIVSPQYMTVPFSIEMVIWVAVGGRGTLVGAILGAVVINYAKSL 309

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                            +       +      LV+      ++ 
Sbjct: 310 VSE--------------ALPQGWLFIQGGLFILVVTALPEGVIG 339


>gi|257457542|ref|ZP_05622709.1| putative galactoside ABC transporter, permease protein [Treponema
           vincentii ATCC 35580]
 gi|257444928|gb|EEV20004.1| putative galactoside ABC transporter, permease protein [Treponema
           vincentii ATCC 35580]
          Length = 580

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/325 (11%), Positives = 88/325 (27%), Gaps = 15/325 (4%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y  I     V   +      G   +   I ++  Q  + + +A G++ ++   G   L+ 
Sbjct: 249 YIAIAIFFVVCIIVAPLSGSGNLLTISNILTILEQSSVRMFYALGVAGLILLAG-TDLSV 307

Query: 71  VIAYAIGAYSYVIL-------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY-- 121
               A+GA    ++        + +G+  W    ++  I     + + +        +  
Sbjct: 308 GRMVAMGAVVTGLILHPGQNIVTFFGMGPWDFTAIAMPIRVLLSVSISIILCVVFSAFAG 367

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
              A L +      +  +         G             ++                +
Sbjct: 368 FFSAWLKIHPFISTLATQLIIYGLLFFGTSGTPVGSI-DAGIKDFFGGRWVLGVVNGELV 426

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
               +++      A       +T +      +  N +A      ++    +S F ++  F
Sbjct: 427 TFPKLIIPAVIAIAVAWFIWNKTVLGKNMYAVGGNAEAASVSGISVFKVTMSVFIMAGIF 486

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIV----ILGGMTSLSKIAKATAILIGVVEL 297
            G    F A   +  +     +  + I   +V      GG+  L    +   I  G+   
Sbjct: 487 YGFGAFFEAFKANASAGTGQGYELDAIAACVVGGISFNGGIGKLEGAVRGVIIFTGLTYC 546

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTT 322
              +        +            
Sbjct: 547 LTFLGIDTNLQFVFKGFIIIAAVAL 571


>gi|118588205|ref|ZP_01545614.1| branched-chain amino acid ABC transporter, permease protein
           [Stappia aggregata IAM 12614]
 gi|118438911|gb|EAV45543.1| branched-chain amino acid ABC transporter, permease protein
           [Stappia aggregata IAM 12614]
          Length = 342

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 41/335 (12%), Positives = 103/335 (30%), Gaps = 17/335 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L +   +L +  +    L+ +   A+     +  + + ++I+ + A GL++V G + +++
Sbjct: 19  LAQKLPVLLVPVLAAVGLIAIGNPASWLTLTVAGLAMGMMIF-IMASGLTVVFGLMDVIN 77

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                  A+GA+    + +              + +    ++  +      G       +
Sbjct: 78  FGHGAFVAVGAFVGFTVLAWLAGWTASPSVFMNLSAVLIAILAAMLVTGLLGLAFERVIV 137

Query: 128 I-MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           + +       ++           +             R               E +    
Sbjct: 138 MPVYGEHLKQILVTMGGLIVAQQMIYVVWGPDELHMSRPEALQGSLVIGEAAIEKYRLVA 197

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +     L   +   L+ T I    R   +N +   +L   I    L  F   SA  G+ G
Sbjct: 198 VGIGLALFIGMRHILKNTKIGLLVRAGVENGEMVEALGYRIRRLFLIVFMTGSALAGLGG 257

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             +   ++ I+  M      ++V  +VI+GG+ S+        ++  +      +     
Sbjct: 258 VMWGLYQETITAHM-GSEIMVLVFIVVIIGGLGSVEGCFIGAMLVGLLANYTAFLA---- 312

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                             +  + +V++ R   L  
Sbjct: 313 ----------PKVALISTIALMVVVLMWRPQGLYP 337


>gi|33594106|ref|NP_881750.1| putative ABC transporter permease protein [Bordetella pertussis
           Tohama I]
 gi|33564180|emb|CAE43459.1| putative ABC transporter permease protein [Bordetella pertussis
           Tohama I]
 gi|332383522|gb|AEE68369.1| putative ABC transporter permease protein [Bordetella pertussis CS]
          Length = 333

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 112/326 (34%), Gaps = 26/326 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
              +   +++            I S  + I I  + ++GL +VV  LG +SL   + +A 
Sbjct: 9   AALLPLAVIVLYLPAWLGGSPAIYSAAVLIAILAVMSYGLDVVVSDLGEVSLGHTVFFAT 68

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY   +L +R G   W+ +  + + +     ++GL +L+ R    ++ T  ++ +   +
Sbjct: 69  GAYVTALLSTRTGAGAWITLAATIVAALGVSAVVGLVTLRLREFVFSLVTYAVAVVAVTV 128

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
              W  +                   + +L       S     +  ++    G+  +   
Sbjct: 129 AANWAFLGG-----------SDGLRGLPTLDLSVAGLSLTARNDEELWPYAFGLLVVVIY 177

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +I   R + +  A   +  N +            +L  F  S+     AG  +A  R  +
Sbjct: 178 LIDRFRHSRLGTAAIMVHQNPRLATMSGIDPARVRLQVFLFSAPISAAAGWLYAYQRAYV 237

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           S D+ +    I++++ V+L G   L     ATA+++   +      +     L       
Sbjct: 238 SADILETYFLILMLTAVVLVGRRQLLGPLLATALVLVQEKFFSFGGYVDKIVLGSVLVLV 297

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
                                 L+ L
Sbjct: 298 LA---------------FFPQGLMGL 308


>gi|163761454|ref|ZP_02168527.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Hoeflea phototrophica DFL-43]
 gi|162281298|gb|EDQ31596.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Hoeflea phototrophica DFL-43]
          Length = 385

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/365 (11%), Positives = 102/365 (27%), Gaps = 36/365 (9%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            +L     +   +L    G          +  + L   + A  + +V G  G+LSL    
Sbjct: 12  ILLLAAFTLAVTVLSEGFGIGLVSTSFVKVLGKTLCLCLIAIAMDLVWGYCGILSLGHFA 71

Query: 73  AYAIGAYSYVILGSRYGLSIWLL-----------------IPVSAMISGACGMIMGLPSL 115
            + +G Y   +          +L                    + +     G  + +   
Sbjct: 72  FFGLGGYMIGMWLMYERTKDIVLNSLSSAELPPTPDEVRDAIGTQIFGVVGGSEIPIVWY 131

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                   +A +++      ++  W    +   G+Y++     +   +   +        
Sbjct: 132 FADSLAAQLALVVLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLYLFQNDSGLR 191

Query: 176 FV------------------IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                               +  ++ +        L   +  ++      N    IRD++
Sbjct: 192 GNNGLSGLQNLPGLTEVPQSVVSVWFFLASALALGLGYVLAAYVVSGKFGNVITAIRDDE 251

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                +   +   KL  F +++    +AGA +      I+P       +I +   V +GG
Sbjct: 252 TRIRFMGYPVEAYKLVVFTLTAVIAAIAGALYYPQAGIINPAEIAPIASIYLAVWVAIGG 311

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
              +       A++  +     G           +   +      L+     LV L   +
Sbjct: 312 RGRIYGAVIGAALVSLLSSWFTGGQVPSIPLGF-YTVDWVDWWQVLLGFGFVLVTLYAPN 370

Query: 338 SLLRL 342
            +  L
Sbjct: 371 GIGGL 375


>gi|260426225|ref|ZP_05780204.1| branched-chain amino acid ABC transporter, permease protein
           [Citreicella sp. SE45]
 gi|260420717|gb|EEX13968.1| branched-chain amino acid ABC transporter, permease protein
           [Citreicella sp. SE45]
          Length = 336

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/327 (10%), Positives = 84/327 (25%), Gaps = 19/327 (5%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS------- 86
            +   +           + A G++++ G L   +       AIG    +++         
Sbjct: 10  LANFVLIPAMAYGSQLALGALGVTLIYGILRFSNFAHGDTMAIGTMITILVTWGLQALGV 69

Query: 87  --RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                 +  L IP     +    +       +F  +  A   +++      + I      
Sbjct: 70  SLSPLPTALLAIPFGIAGTALLVLGTDRLIYRFYREQKAKPVILVIVSMGVMFIYNGLTR 129

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                                  +        +  +      ++    + A +  +L RT
Sbjct: 130 FVIGPNDQDFDDGTRFLISARDFKAMTGLDEGLALKSTQAITVVTAVIVVALLFWFLNRT 189

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
               + R   DN+                 + + SA   +AG  +   +         F 
Sbjct: 190 RTGKSMRAYSDNEDLALLSGINPERVVTVTWIIVSALAVVAGTLYGLDKSF--KPFTYFQ 247

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSLLKFDCSF 316
             + + +  I+GG+ S         I+             +   +               
Sbjct: 248 LLLPIFASAIVGGLGSPLGAIAGGFIIAFSEVGITYAWKKVATYLLPEALEPSGLVQLMS 307

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLR 343
                 +  + L +V+L R   L + +
Sbjct: 308 TDYKFAVSFVILIIVLLFRPTGLFKGK 334


>gi|239991473|ref|ZP_04712137.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces roseosporus NRRL 11379]
          Length = 676

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 50/286 (17%), Positives = 105/286 (36%), Gaps = 12/286 (4%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y  S+    L   + A  ++I+ G  GL +L     +A+GAY+   L         + 
Sbjct: 363 DAYSISLAGSALALGLLAVSVTILTGYAGLPTLGQTAPFAVGAYATANLADAGWTVGPVQ 422

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           I +SA+ +     ++G   ++ RG  + + TL + E+   ++ + K +T G  G+     
Sbjct: 423 IVLSALAAAVFAAVVGPAVIRARGTTVLMITLAIGELTGAVVNQLKSVTGGADGLVGFPA 482

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
              L            +    ++ E  +Y   L +  ++ ++ L + R+         R 
Sbjct: 483 TRAL------------WGGEEMLEESELYNYALVVAVVAVALTLLVLRSPAGKLLTGTRG 530

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
            +    +    +    L A   + A  G+ G+     +  +SP    F      +  V++
Sbjct: 531 AEARMRASGHPVGRYLLVAHIGAGALAGVGGSLMVTVQQYLSPADVGFEIAAFALLAVVI 590

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
           GG TS+        +++   +   G    +   LL       +   
Sbjct: 591 GGTTSVIGALLGAGLIVATRDWVAGSWPGHGPLLLGVLFVATVYVL 636



 Score = 40.2 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 78/272 (28%), Gaps = 13/272 (4%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           L+  + A GLS+  G+ G+L+L+    YAIGAY+   L       + L +      +   
Sbjct: 19  LLLFVVAAGLSLAFGTAGVLNLSHGTLYAIGAYTGAELSDGTWGGLALGLAAGTAAACVA 78

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G  +   +            L+   +                             T+   
Sbjct: 79  GAGLSAATAPLARRGHLAQALLTFGLALIGGDLLIQFFGADELPVRVPEALDSSVTLLGH 138

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                       Y  +    ++    L+A     L RT +  A R   D+ +   +   +
Sbjct: 139 R-----------YPAYRLCFIVMAVLLAAFGTWVLTRTRMGAAVRAAADDPQMLAATGHS 187

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
                    A + A  G AG   A                 +V+ ++    + SL     
Sbjct: 188 PRAVHTGVLAAAGALAGAAGVLGAPIIGPGPGTSENVLMLSLVVVVLGG--LRSLWATFF 245

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           A   +  V  L   +       LL    +  +
Sbjct: 246 AAVAVGEVQTLGVSVAPELAPYLLFAAMAAVL 277


>gi|332525961|ref|ZP_08402102.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2]
 gi|332109512|gb|EGJ10435.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2]
          Length = 412

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 108/312 (34%), Gaps = 17/312 (5%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            ++   L      L+              ++  QI I ++     ++++G  G+LS    
Sbjct: 4   RRVRAALVWGAYALVLAGAPWLFDSSLALTLLSQIGIAIVACLAFNLLLGQGGMLSFGHA 63

Query: 72  IAYAIGAYS-----YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           +   +GAY+       ++     L + L+  V  +   A    +G  + +  G   A+ T
Sbjct: 64  VYSGLGAYAAIHTLRWMVAGELALPVSLVPLVGGLGGLAGAATLGWLTTRTAGTPFAMIT 123

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L + E+   + + +  +  G+ G+                +               +Y +
Sbjct: 124 LGLGELVAAVALMFPTVFGGEGGLS------------ADRVIGEPVWGISFGPAWQVYAL 171

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +   CF+  + +    RT +      +RDN      +  +    +  AF VS  F+G+AG
Sbjct: 172 IAVYCFVCTAAMYGFTRTPLGRMLNAVRDNPLRAEFVGYSARRVRYRAFLVSGFFMGVAG 231

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
              A   + +S ++     +   +   +LGG    +       +++    L   +   + 
Sbjct: 232 GLAALHFEIVSAEVLGSLRSGAYLLFTVLGGSGYFAGPILGAVLMVLAGVLLSALTRAWL 291

Query: 307 NSLLKFDCSFNM 318
             L     +  M
Sbjct: 292 LYLGLAFIAVVM 303


>gi|300693057|ref|YP_003749030.1| high-affinity branched-chain leucine/isoleucine/valine transporter
           subunit protein (ABC superfamily, membrane) [Ralstonia
           solanacearum PSI07]
 gi|299075094|emb|CBJ34376.1| high-affinity branched-chain leucine/isoleucine/valine transporter
           subunit protein (ABC superfamily, membrane) [Ralstonia
           solanacearum PSI07]
          Length = 293

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 55/305 (18%), Positives = 114/305 (37%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y +FA G ++V G LG+++L+    + +GAY+ + + + + L +W  + V
Sbjct: 6   LVNALSLGCVYALFALGFTLVFGILGVINLSHGAVFMLGAYAALQVVTHFELPLWAALLV 65

Query: 99  SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              +SG  G+++ +       R +   +  +I +      +        G   +     L
Sbjct: 66  GFAVSGVAGLVIDVVLLRPLRRRNAPHLIPMIATIGAGIAINNAMQGVFGAENLRFPAGL 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
               +     I                  +++    L A+++L L+RT +  A R I ++
Sbjct: 126 VSDASLDLGGIHLTPLELG----------IIVLSFVLMAALMLLLKRTQLGRALRAIAES 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            KA   L   +    L     ++A  G+AG       + + P M +   +  + +++ILG
Sbjct: 176 PKAAALLGIHVEGLFLLTSFAAAALGGLAGVLIGLYSNAVFPLMGQPMLHKGI-AVIILG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+  +         L     L            + F               LFL++L+R 
Sbjct: 235 GLGDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG-------------LLFLILLVRP 281

Query: 337 HSLLR 341
             L  
Sbjct: 282 QGLFG 286


>gi|226355571|ref|YP_002785311.1| branched-chain amino acid ABC transporter permease [Deinococcus
           deserti VCD115]
 gi|226317561|gb|ACO45557.1| putative branched-chain amino acid ABC transporter, permease
           component [Deinococcus deserti VCD115]
          Length = 309

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 59/310 (19%), Positives = 121/310 (39%), Gaps = 45/310 (14%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY----------GLS 91
           + + +L   +    L   +   G LSL     YA+G Y   I+ +               
Sbjct: 11  LIVTLLQAGLLGLSLYFPL-QAGQLSLASPGFYALGGYVAAIMLTHPTFAGIRDALGHGV 69

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L   V+A++SG  G+++G+P+L+ RG YLA+AT+   EI + + +  + IT G  GI+
Sbjct: 70  FPLTWLVAALLSGVLGLVVGIPALRLRGIYLALATIAFVEILRVLSLNLQ-ITGGAIGIF 128

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              + +      +                    ++   +  L+      L R+ +  A R
Sbjct: 129 GIPQAFGFQDRWQ------------------YVFLFGPLLVLTLLFAYQLERSRVGRALR 170

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            IR+++ A  ++       K+ AF + +   G+ G+  A   +  +     F  +I +++
Sbjct: 171 AIREDELAADAMGVPPTRYKVLAFVIGAVLAGIVGSMSAPFLNTWNAKQGTFDASIAILA 230

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
            V++GG  ++       A+L  V E+   +               +     +  + L + 
Sbjct: 231 FVLIGGSRNIWGPVVGGALLTAVPEVLRFL---------------SDWRLIINGLVLVVA 275

Query: 332 ILMRSHSLLR 341
            L     ++ 
Sbjct: 276 SLYLPQGIVG 285


>gi|254461982|ref|ZP_05075398.1| ABC transporter, permease/ATP-binding protein [Rhodobacterales
           bacterium HTCC2083]
 gi|206678571|gb|EDZ43058.1| ABC transporter, permease/ATP-binding protein [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 431

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 45/336 (13%), Positives = 112/336 (33%), Gaps = 23/336 (6%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R+      + L+  +      + +    +     ++  Q+ I V+FA   ++++G  G+L
Sbjct: 15  RMRAGSMTMTLMPWILAAGALMLMPFIFTSSSALTIMNQMWITVIFALAYNMLLGQGGML 74

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S    +   +G ++ + + +         +PV  +  G  G  + +    F         
Sbjct: 75  SFGHAVYAGVGGFACMHIMNASDFFASFPLPVLPVFGGIFGAGLAMIVGSFSTRSAGTVF 134

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
            ++S     ++          + + +                   F  +  + +I +YY+
Sbjct: 135 AMISLGVGELI--------AASSVIIVAFFGGEEGISGDRTYAMPFFGNEFLQQINVYYL 186

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
                 LSA+++    RT +      +RDN +    L  +  + +  +F  S  F G+AG
Sbjct: 187 TSFWVLLSAALMYLWSRTPVGRMANAVRDNPERAEFLGYSARWVRYYSFVASGFFAGIAG 246

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             FA + + ++ +    + + +++ +  LGG+           +   V  +       + 
Sbjct: 247 GLFAINYEIVTEENLNTASSGVILLVTFLGGVGFFFGPIIGAIVFTLVQTVLSLQTELW- 305

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                                    ++     L  L
Sbjct: 306 --------------AFYAGSLFLATVMFFPGGLAGL 327


>gi|253827373|ref|ZP_04870258.1| ABC transporter, permease protein [Helicobacter canadensis MIT
           98-5491]
 gi|253510779|gb|EES89438.1| ABC transporter, permease protein [Helicobacter canadensis MIT
           98-5491]
          Length = 293

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 93/290 (32%), Gaps = 11/290 (3%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +Y + A G ++V G L L++        +GA+      S  GL  +  +  +
Sbjct: 5   INGLSLGSMYALIAIGYTMVYGCLRLINFAHADIIMVGAFLSFFAVSSLGLPFYASVIFA 64

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +I    G+ +   +         I+ LI +      L     +  G    + +   +F 
Sbjct: 65  VVICMILGVGIDRVAYLPLRSAPRISMLITAIGVSFFLENLFNVLFGSTPRFFSSPEFFA 124

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T          F  S +        V +    L  +++ +L RT    A R    +   
Sbjct: 125 KT----------FNFSNISITYITIIVPIVTLILLVALLQFLYRTKQGMAIRATAFDINT 174

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +       F + SA  G+ G F+A S   I P M      +   +  +LGG+ 
Sbjct: 175 VRLMGINVNNIIGLVFVIGSALAGIGGIFYAISYPTIDPLM-GIMIGLKAFAAAVLGGIG 233

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           S+        IL     +   +          F   F +       + + 
Sbjct: 234 SVGGAVLGGFILGFTEVMAVAVFPELGGYKDAFAFLFLILVLLFRPVGIM 283


>gi|84502499|ref|ZP_01000635.1| amino acid ABC transporter permease protein [Oceanicola batsensis
           HTCC2597]
 gi|84389311|gb|EAQ02108.1| amino acid ABC transporter permease protein [Oceanicola batsensis
           HTCC2597]
          Length = 294

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 90/296 (30%), Gaps = 26/296 (8%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           +Y + A GL+++ G   +++        +G Y+   L +  G++ +   P+ A+     G
Sbjct: 17  VYALAALGLNLIFGVAKIVNFAHGEFMMLGMYAGFWLMTLTGINPYWGSPLIAVAFFVVG 76

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
                  ++F      +  +  +      L     +                 T      
Sbjct: 77  AAFYWGVMRFTIYSTELTQVFATLGMSIALQNLALVMFSAD----------YRTIQTMPD 126

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                   FV          L    +   +IL+LRRT    A   +  +  A   +    
Sbjct: 127 GRSSIDFGFVHLSSDRVIAFLFAIAIFVGVILFLRRTFTGRAIEAVSQDLMAARLMGINT 186

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
               L  F +     G+AGA    S              +I   +V+LGG+ S++     
Sbjct: 187 QKIFLITFGLGIGITGVAGAVLVPSFYA--FPSVGTFFVLIAFVVVVLGGLGSVTGTMIG 244

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
              L  +       +     +                 I L L++ +R   +L ++
Sbjct: 245 GLSLGLIESYVGYFSPDLKEATH--------------FILLILLLAVRPQGILGVK 286


>gi|114763544|ref|ZP_01442949.1| ABC-type transport system permease protein II (probable substrates
           urea/short chain-amides) [Pelagibaca bermudensis
           HTCC2601]
 gi|114543824|gb|EAU46836.1| ABC-type transport system permease protein II (probable substrates
           urea/short chain-amides) [Roseovarius sp. HTCC2601]
          Length = 346

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 112/331 (33%), Gaps = 19/331 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V   L  +F+       +      Q ++  +FA  L  + G  G+LS      + +GA
Sbjct: 13  VMVAIGLAVMFIAPVMLDLFTIMQITQYVVLSVFALSLGYIWGFGGILSFGQAAFFGLGA 72

Query: 79  YSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           Y++ +        +I +++           +   +   +    YL + TL+++ IF  ++
Sbjct: 73  YTFAVASINMGSTTIPMVLAFVIPTLFGAALGYFMFYGRLSDVYLGVVTLVVALIFWKLI 132

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                   G      + RL                  S  +    M+ V +G   +    
Sbjct: 133 NHTA----GPEYSIGSARLGGFNGIPSIPTLHVPGDPSAWLDPGQMFQVFMGFLLVIYVA 188

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           + +L  +       +IR+N+     L   +   K+  FA+     G+AGA +A  +  I 
Sbjct: 189 LRFLIASDFGRVSISIRENETRSSLLGYDVRKHKVIVFAIGGGIAGIAGAMWATYQAFID 248

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P+      +   +  V+ GG+ +L        +L  +               L+      
Sbjct: 249 PNSVSMEMSAKALVWVMAGGVGTLVGPIIGCILLQWLT--------------LQLGTVDV 294

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
           +    ++   + +++L     ++        
Sbjct: 295 VNSIAVLGAIMMVLVLALPKGIVPTARSLLL 325


>gi|283835850|ref|ZP_06355591.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Citrobacter youngae ATCC 29220]
 gi|291068021|gb|EFE06130.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Citrobacter youngae ATCC 29220]
          Length = 308

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDSSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +       +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ L++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWTVGSSENFSASITTMQLVIWIVTFLAMLALTLFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|256043827|ref|ZP_05446748.1| hypothetical protein Bmelb1R_04996 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|260565007|ref|ZP_05835492.1| branched-chain amino acid ABC transporter [Brucella melitensis bv.
           1 str. 16M]
 gi|265990251|ref|ZP_06102808.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1]
 gi|260152650|gb|EEW87743.1| branched-chain amino acid ABC transporter [Brucella melitensis bv.
           1 str. 16M]
 gi|263000920|gb|EEZ13610.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1]
          Length = 331

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 130/337 (38%), Gaps = 33/337 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +   L+  +         +     +++L + +FA   ++++G  G+LS      +
Sbjct: 25  LSAIVLGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 80

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              AY        +G+S  L + +  + + A G+++G  +++ +G Y  + TL ++++F 
Sbjct: 81  GAAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              ++                       ++ + R F F    +   + MYY +L +  L 
Sbjct: 141 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              I  +  +      +++R+N+    SL  ++   KL+AF +S+   G+AG   A    
Sbjct: 187 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 246

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             +     +  +  VI + +LGG+ +L       A ++ +       +F           
Sbjct: 247 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 297

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 T +  +     +L+    ++     S   ++
Sbjct: 298 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 328


>gi|269127446|ref|YP_003300816.1| urea ABC transporter permease protein UrtB [Thermomonospora curvata
           DSM 43183]
 gi|268312404|gb|ACY98778.1| urea ABC transporter, permease protein UrtB [Thermomonospora
           curvata DSM 43183]
          Length = 292

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 89/305 (29%), Gaps = 25/305 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++ A GL+   G +G++++       +GAY+  +L    G     +    A  
Sbjct: 12  LSIGAVLLLIALGLTFTFGQMGVINMAHGEFIMVGAYTAYMLQDWAGTQAAAVALPVAFA 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                  +   +         + TL+++     +L +      G   + V    +  G  
Sbjct: 72  LAGAMGWVLERAAIRHFYGRPLDTLLLTWGVSLVLQQAARDIFGAPNVQVVAPTWLSG-- 129

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                          +      +++         I L++ R+A     R +  N++    
Sbjct: 130 --------GVHIGGTVIPYNRLFIMALAAVCVVGIWLYMNRSAQGRRMRAVMQNRRLAAC 181

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       F + S   G+AG   A +              +    +V++GG+  L 
Sbjct: 182 SGVATGRVDQLTFFIGSGLAGVAGV--ALTLIGPVGPSLGTYYIVDAFLVVVVGGLGQLR 239

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L  +                            ++  A+   + +R   +  L
Sbjct: 240 GAVLAALALGMLNSFAEFWTNASLAK-------------VIVFAAIVAFLQLRPQGMFVL 286

Query: 343 RTPSN 347
           R+ + 
Sbjct: 287 RSRAL 291


>gi|126724489|ref|ZP_01740332.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2150]
 gi|126705653|gb|EBA04743.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2150]
          Length = 336

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/332 (9%), Positives = 87/332 (26%), Gaps = 19/332 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L      S   +           + A G+++V G L   +       A G    ++   
Sbjct: 3   LLNAFTLLSNFVLVPAIAYGSQLALGALGITLVFGILRFSNFAHGDTMAFGTMVVILFTW 62

Query: 87  RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            +              L +P+  +   A  ++      KF     A   + +      + 
Sbjct: 63  MFQSMGISLGPLPTALLALPIGMVFCAAFVLLSDRVVYKFYRAKKAAPVVYLIASVGVMF 122

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +    +                        +     +  +  ++     ++    + A +
Sbjct: 123 VMNGVVRLIIGPDDQRFADGERFIIKARTFKQMTGLNEGLSIKVSQGLTVVTAIIVVAVL 182

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L RT    + R   DN+                 + +++    +AG  +   +    
Sbjct: 183 FWFLNRTRTGKSMRAYSDNEDLALLSGINPEKVVAVTWILAAFLATIAGTLYGLDKSY-- 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV--------ELCCGMNFYYFNSL 309
                F   + + +  I+GG+ S         ++            +    +    +   
Sbjct: 241 KPFTYFQLLLPIFAAAIVGGLGSPLGAITGGFVVAFSEIMITYPYKKFIAYLGPKDWAPE 300

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                        +  + L +V+L++   L  
Sbjct: 301 GLLQLLSTDYKFAVSFVILVVVLLIKPTGLFG 332


>gi|22299222|ref|NP_682469.1| branched-chain amino acid ABC transporter permease protein
           [Thermosynechococcus elongatus BP-1]
 gi|22295404|dbj|BAC09231.1| branched-chain amino acid ABC transporter permease protein
           [Thermosynechococcus elongatus BP-1]
          Length = 311

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 48/311 (15%), Positives = 97/311 (31%), Gaps = 23/311 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--------YVILGSRYGL 90
           +        +Y +FA G ++V   LG+++      +A+GAY         +   G     
Sbjct: 9   LVDGLATGSVYAIFALGYTLVFSILGIINFAHGAVFALGAYLTYALLGGRFGFNGLLANG 68

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + + +P +  ++ +      L        +  +       +   +      +       
Sbjct: 69  QLPVALPFAPALALSALGCGLLGVGIDWIVFRPLRQQGTDTLLTVVASLGAAVFLTNLIQ 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
           Y+     +                  +        +      L  ++  W++ T +    
Sbjct: 129 YLVGAEVYTYPDQLWGGLPLTLQWGDITLRTSQLIIFAVAVVLMIALTYWVKGTRMGKGL 188

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           + + +N  A   L           F VSSA   +AG   A S   I+   F     +  +
Sbjct: 189 QAVAENPTAATLLGIDGDRIIQVTFFVSSALAAVAGTLIALSVG-ITGPQFGVIFGLKGL 247

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           ++++LGG+ SL     A  +L  V  +                 + +          LFL
Sbjct: 248 AVIVLGGLGSLPGTMLAGFLLGLVEAMV--------------PAAASGFRDAAAFAILFL 293

Query: 331 VILMRSHSLLR 341
           V+L R   LL 
Sbjct: 294 VLLARPQGLLG 304


>gi|84684272|ref|ZP_01012174.1| probable amino acid transport system permease lipoprotein
           transmembrane [Maritimibacter alkaliphilus HTCC2654]
 gi|84668025|gb|EAQ14493.1| probable amino acid transport system permease lipoprotein
           transmembrane [Rhodobacterales bacterium HTCC2654]
          Length = 420

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 44/330 (13%), Positives = 103/330 (31%), Gaps = 35/330 (10%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++        +      +   ++  Q+ I ++FA   ++++G  GLLS    + +  G Y
Sbjct: 26  ILIFAACLAAIPMVGPSRTFYTIAHQMGINIVFALSYNMILGKGGLLSFGHAVYFGFGGY 85

Query: 80  SYVILGSRYG--------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +   +             ++ L  V        G I+G PS +  G   A+ +L ++E
Sbjct: 86  VAMHAMNWIEDGSGLWAGFPVFFLPLVGFAGGALAGAIIGWPSCRKAGTTFAMISLGVAE 145

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +       +     G+ GI                +         +     +Y+ +    
Sbjct: 146 LVFAAAFMFDSFFGGEQGIS------------GDRMNGVELFGLSMGPISEVYWFIAFWT 193

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +    +    RT +       RDN +    +       +   F  +  F G+AG   A 
Sbjct: 194 VVGLVGMWAFTRTPLGKLSEATRDNAQRVQFIGYNPQRVRYLVFIFAGGFAGLAGGMAAV 253

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           + +  +PD      +  V+ +  +GG+T          +L  +  +       +      
Sbjct: 254 NYEIFTPDAMSLVPSGFVLIMAYVGGITYFVGPIFGAILLTYMQSMLSDFTEAW------ 307

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                       + +    +++     +  
Sbjct: 308 ---------LLYLGVLFIAIVMFAPRGIAG 328


>gi|317402682|gb|EFV83235.1| inner-membrane translocator [Achromobacter xylosoxidans C54]
          Length = 306

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 95/308 (30%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL++V G + +++L     Y  GAY       R G     ++  
Sbjct: 10  LLNGLQFGLMLFLIAAGLTLVFGIMDIMNLAHGSLYMAGAYVAAETMQRTGSFTAAVLVA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +         +      +          L + +    +L  +  I      + +      
Sbjct: 70  AVATGLVGVALELTLIRR----------LALRDHLAQVLGTYAVILIANDLVKMIWGPAP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + +L+         ++Y  +   +++     +  +  ++ RT      R    N++
Sbjct: 120 VMLNMPALLSGPVRLLPDLLYPAYRLMIIVFGVASAVGLYWFVTRTRAGVLVRAGASNRQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L  F + +    +AGA                   I+V+  +++GG+
Sbjct: 180 MATLMGVRVPLLFLGVFVLGAMLAAVAGALLGPITSV--QVGMGEEILILVLVCIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335
            S+        ++  V              +     +           + + +  V++ R
Sbjct: 238 GSIRGAFVGALLVGMVDTAGRAFLPMLLRQVFSPAVASSVGPTLAAIAIYVLMAAVLVFR 297

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 298 PSGLFPAR 305


>gi|170748667|ref|YP_001754927.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
 gi|170655189|gb|ACB24244.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
          Length = 305

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 94/313 (30%), Gaps = 30/313 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89
           + +      IY + A G ++V G +G+++      + +  +         +  +  S   
Sbjct: 8   LINGLTLGSIYGLIAIGYTMVFGIIGMVNFAHGDVFMVSCFIALITFLLLTVWLGVSSIA 67

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L+  +++ V+  ++   G  +   + +       +A LI +      L  +  +  G   
Sbjct: 68  LAFLVVLVVAMALTALWGWAIERVAYRPLRGSFRLAPLISAIGVSIFLSNFVQVVQGARN 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                 L    T               V+       +L             ++RT    A
Sbjct: 128 KPTPPMLSGGITLFERDGYAVFLAWKQVLIMAVTAVLL-------TGFWYLVQRTPFGRA 180

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +A   +AG  +      +S     F   +  
Sbjct: 181 QRACEQDRKMAALLGIDVDRTISLTFVLGAALAAVAGVLYLMYYGVVSF-SDGFVPGVKA 239

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        I+  +           +  +  F               L 
Sbjct: 240 FTAAVLGGIGSLPGAVLGGLIIGLIETFWSAYFSIEYKDVAAFS-------------ILA 286

Query: 330 LVILMRSHSLLRL 342
           +V++     +L  
Sbjct: 287 IVLIFMPSGILGR 299


>gi|86360217|ref|YP_472106.1| sugar ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86284319|gb|ABC93379.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           CFN 42]
          Length = 749

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/339 (12%), Positives = 108/339 (31%), Gaps = 38/339 (11%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           ++I          +  LL  +  ++    L    +  ++  +     +  + A G ++V+
Sbjct: 437 LNIVRSAFRNPPLLTFLLVALVWIVASFTLRGFGAYGHLRYLLELAAVIGIVAAGQTLVI 496

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
             +G + L+      + A    ++   +  +    I  +  I+   G++ G  +   R  
Sbjct: 497 -LMGGIDLSVGAVITVTAILLPLISPAWDPTGLAGIAAALAIATGIGLMNGAGATYLRVP 555

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
                 +IM+      L     I  G + + V++    +    R L              
Sbjct: 556 P-----IIMTLAMATFLQGLLIIVAGGSAVTVSNPAVIMLGQARPLGIPSG--------- 601

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
                 ++    ++  ++L + R  I   +  +  N  A      ++    + A  +S  
Sbjct: 602 ------IILWVAVAVVVLLLVHRMPIGARFLALGANPLAARLSGVSVTRNTVIAHTLSGF 655

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVV 295
           F G+ G        +    +        + ++V     ILGG  + +       +L+   
Sbjct: 656 FAGLTGILVLGMNRQGYVGIGDPYLLTSIAAVVLGGTSILGGRGTYAGTIPGAILLVTAT 715

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
            L   +N            +     + +    +  ++L+
Sbjct: 716 ALITVVN------------ASPGWRSIMFGTLILALLLV 742


>gi|51891960|ref|YP_074651.1| branched-chain amino acid ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
 gi|51855649|dbj|BAD39807.1| branched-chain amino acid ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
          Length = 295

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 98/303 (32%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++        +GA+       R       ++  
Sbjct: 8   VVNGLQLGFVYALIAVGYTMVYGIIKLINFAHGDVIMVGAFVTFFGLVRGIPWPAAILTG 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A  +    +I  L     R         +++ I  ++ ++         G         
Sbjct: 68  MATCALLGVVIERLAYRPLRVKGAPRIAALITAIGVSLFLENFASLRIAFG--------P 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +++   ++    V        +      L   + L + RT I  A R +  +  
Sbjct: 120 DHRQFPAMVTRLQWNVFGVTISSVQVLIAGVTIVLVLILQLVVYRTKIGKAMRAVALDLD 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA    AGA +AA+  +I P M      +   +  +LGG+
Sbjct: 180 AARLMGINVDRVIAFTFAIGSALAAAAGALWAAAYPQIWPYM-GIPPGLKAFTAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++     L        F   + F               L LV+L+R   
Sbjct: 239 GSIPGALLGAVLMGQAEVLTAAYITTDFRDAVAF-------------ALLILVLLVRPAG 285

Query: 339 LLR 341
           LL 
Sbjct: 286 LLG 288


>gi|225628510|ref|ZP_03786544.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ceti str. Cudo]
 gi|254706410|ref|ZP_05168238.1| Bacterial inner-membrane translocator [Brucella pinnipedialis
           M163/99/10]
 gi|254711300|ref|ZP_05173111.1| Bacterial inner-membrane translocator [Brucella pinnipedialis
           B2/94]
 gi|254720718|ref|ZP_05182529.1| Bacterial inner-membrane translocator [Brucella sp. 83/13]
 gi|256030070|ref|ZP_05443684.1| Bacterial inner-membrane translocator [Brucella pinnipedialis
           M292/94/1]
 gi|256158242|ref|ZP_05456151.1| Bacterial inner-membrane translocator [Brucella ceti M490/95/1]
 gi|256252817|ref|ZP_05458353.1| Bacterial inner-membrane translocator [Brucella ceti B1/94]
 gi|260166879|ref|ZP_05753690.1| Bacterial inner-membrane translocator [Brucella sp. F5/99]
 gi|261219898|ref|ZP_05934179.1| inner-membrane translocator [Brucella ceti B1/94]
 gi|261313861|ref|ZP_05953058.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10]
 gi|261318899|ref|ZP_05958096.1| inner-membrane translocator [Brucella pinnipedialis B2/94]
 gi|261756259|ref|ZP_05999968.1| bacterial inner-membrane translocator [Brucella sp. F5/99]
 gi|265985770|ref|ZP_06098505.1| inner-membrane translocator [Brucella sp. 83/13]
 gi|265987098|ref|ZP_06099655.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1]
 gi|265996759|ref|ZP_06109316.1| inner-membrane translocator [Brucella ceti M490/95/1]
 gi|306839329|ref|ZP_07472145.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. NF 2653]
 gi|225616356|gb|EEH13404.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ceti str. Cudo]
 gi|260918482|gb|EEX85135.1| inner-membrane translocator [Brucella ceti B1/94]
 gi|261298122|gb|EEY01619.1| inner-membrane translocator [Brucella pinnipedialis B2/94]
 gi|261302887|gb|EEY06384.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10]
 gi|261736243|gb|EEY24239.1| bacterial inner-membrane translocator [Brucella sp. F5/99]
 gi|262551056|gb|EEZ07217.1| inner-membrane translocator [Brucella ceti M490/95/1]
 gi|264659295|gb|EEZ29556.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1]
 gi|264664362|gb|EEZ34623.1| inner-membrane translocator [Brucella sp. 83/13]
 gi|306405577|gb|EFM61840.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. NF 2653]
          Length = 406

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 106/311 (34%), Gaps = 26/311 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                + + +  IQ+LI  +FA   S++ G  G+LS      + +G+++ V   + +G  
Sbjct: 20  PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHAMNAFGGE 79

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L  P+  +     G++ GL +  F      +   +++     +L    P   G  G  
Sbjct: 80  GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFGGE 139

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                + +                       +YY+ L     S  ++  L  T       
Sbjct: 140 AGVSSFRMPAW-----------GFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R+N      L   +       FA+S+ F G+AGA  A + +  +  +F+   +  V+ 
Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
              +GG+ +    A   A +     +   +   +                    +   LV
Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLIFVLV 293

Query: 332 ILMRSHSLLRL 342
           ++     L+  
Sbjct: 294 MMFLPRGLVGE 304


>gi|146341003|ref|YP_001206051.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. ORS278]
 gi|146193809|emb|CAL77826.1| Putative Branched-chain amino acid ABC transporter (permease
           protein) [Bradyrhizobium sp. ORS278]
          Length = 350

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 98/293 (33%), Gaps = 3/293 (1%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           ++K  ++    A     +  + +  +  + +            + A  L+ + G  G+LS
Sbjct: 1   MDKRLRLALQAAGTVVAVGVIAIVPSVIELFGLMQLTLFAAMSVLALSLAFIWGYGGILS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                 + +G Y+Y I    +  S    I ++ ++      I+G      R   + +  +
Sbjct: 61  FGQTAFFGLGGYAYAIAAVNFQDSTP-AILLAIVVPALFAAILGYFIFFGRISDVYLGVI 119

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++     IL      T+G A       L               F  S V+     ++  
Sbjct: 120 TLTVTL--ILFNSVNSTSGDAYKIGKALLGGFNGMPAVPTFNVPFDPSTVLSPEQSWWTT 177

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +      ++  L           +R+N+     L       K   F +  A  G+AGA
Sbjct: 178 AYVLLGVFLLLRLLLALPAGRIIVAVRENEVRASLLGYDPRLVKCLTFILGGAIAGLAGA 237

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
            +      +SP +F  S +  +I  + +GG+ +L        ++  +V     
Sbjct: 238 LYVNWGAFVSPTIFSLSLSAEIIIWITVGGLGTLLGPIIGCVVIEYIVAYIGS 290


>gi|330958779|gb|EGH59039.1| inner-membrane translocator [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 300

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 93/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+ A GL+IV G +G++++      A+G+Y+  +    +      L+    +I
Sbjct: 14  FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYATYVTSVVFQRYFPELMGWYFII 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 ++                 + +     +L  W      +           +   
Sbjct: 74  GIGVAFVVTFAFGFLLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 131

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               ++     S  +   +   +++     ++A++ L+L R+      R +  N+    +
Sbjct: 132 TVQWLQGAWKVSEGLELPLNRIFIIGLTFVIAAAVFLFLYRSRWGLRIRAVTQNRAMAGA 191

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     G+AG+ F       +  +      +    +V+ GG+ SL 
Sbjct: 192 AGINTARVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 249

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +         +        +               + + +++  R + L   
Sbjct: 250 GTFLSAFAIGQTQISLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 296

Query: 343 R 343
           +
Sbjct: 297 K 297


>gi|297616858|ref|YP_003702017.1| inner-membrane translocator [Syntrophothermus lipocalidus DSM
           12680]
 gi|297144695|gb|ADI01452.1| inner-membrane translocator [Syntrophothermus lipocalidus DSM
           12680]
          Length = 291

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 100/304 (32%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G + L++      Y  GA++ + L +   +++++ +  
Sbjct: 6   LVNGLTLGSTYALIALGYTMVYGIIQLINFAHGEIYMFGAFAGLFLVTVLQVNVFVAMTG 65

Query: 99  SAMISGACGMIMGLPSL-KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           + +     G+++   +    RG    ++ LI +      L     + +G           
Sbjct: 66  AMIFCMVLGVLVERIAYRPLRGRSSRLSALISAIGVSIFLSTLMVLMHGPETERYP---- 121

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                    ++   F    +        +L+    L   + L++ RT +  A R    + 
Sbjct: 122 -------DTVKIASFHVGTIQVSSLQVIILVVTAVLMIWLQLFIHRTRLGKAMRACSQDL 174

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A   +   +       FA+ SA     G       + + P M      +   +  +LGG
Sbjct: 175 DAAALMGVDVNRVISFTFALGSALAAAGGVMVGLYYNAVWPYM-GLMAGLKAFAAAVLGG 233

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+         L  +           +   + F               L LV+++R  
Sbjct: 234 IGSIPGAMLGGISLGIMEIFGVAYLSSSYRDAIAFG-------------ILILVLIVRPQ 280

Query: 338 SLLR 341
            +L 
Sbjct: 281 GILG 284


>gi|62316986|ref|YP_222839.1| branched-chain amino acid ABC transporter permease [Brucella
           abortus bv. 1 str. 9-941]
 gi|83268981|ref|YP_418272.1| inner-membrane translocator [Brucella melitensis biovar Abortus
           2308]
 gi|189022258|ref|YP_001931999.1| Bacterial inner-membrane translocator [Brucella abortus S19]
 gi|237816549|ref|ZP_04595541.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus str. 2308 A]
 gi|254691527|ref|ZP_05154781.1| Bacterial inner-membrane translocator [Brucella abortus bv. 6 str.
           870]
 gi|254698276|ref|ZP_05160104.1| Bacterial inner-membrane translocator [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254731718|ref|ZP_05190296.1| Bacterial inner-membrane translocator [Brucella abortus bv. 4 str.
           292]
 gi|256256712|ref|ZP_05462248.1| Bacterial inner-membrane translocator [Brucella abortus bv. 9 str.
           C68]
 gi|260544225|ref|ZP_05820046.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038]
 gi|260757152|ref|ZP_05869500.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870]
 gi|260759478|ref|ZP_05871826.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292]
 gi|260762722|ref|ZP_05875054.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882961|ref|ZP_05894575.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68]
 gi|297250071|ref|ZP_06933772.1| branched-chain amino acid transport system permease [Brucella
           abortus bv. 5 str. B3196]
 gi|62197179|gb|AAX75478.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|82939255|emb|CAJ12191.1| Bacterial inner-membrane translocator [Brucella melitensis biovar
           Abortus 2308]
 gi|189020832|gb|ACD73553.1| Bacterial inner-membrane translocator [Brucella abortus S19]
 gi|237787362|gb|EEP61578.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus str. 2308 A]
 gi|260097496|gb|EEW81370.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038]
 gi|260669796|gb|EEX56736.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292]
 gi|260673143|gb|EEX59964.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59]
 gi|260677260|gb|EEX64081.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870]
 gi|260872489|gb|EEX79558.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68]
 gi|297173940|gb|EFH33304.1| branched-chain amino acid transport system permease [Brucella
           abortus bv. 5 str. B3196]
          Length = 406

 Score = 73.4 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 107/311 (34%), Gaps = 26/311 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                + + +  IQ+LI  +FA   S++ G  G+LS      + +G+++ V + + +G  
Sbjct: 20  PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHVMNAFGGE 79

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L  P+  +     G++ GL +  F      +   +++     +L    P   G  G  
Sbjct: 80  GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFGGE 139

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                + +                       +YY+ L     S  ++  L  T       
Sbjct: 140 AGVSSFRMPAW-----------GFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R+N      L   +       FA+S+ F G+AGA  A + +  +  +F+   +  V+ 
Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
              +GG+ +    A   A +     +   +   +                    +   LV
Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLIFVLV 293

Query: 332 ILMRSHSLLRL 342
           ++     L+  
Sbjct: 294 MMFLPRGLVGE 304


>gi|294339507|emb|CAZ87866.1| putative ABC-type branched-chain amino acid transport system,
           permease component [Thiomonas sp. 3As]
          Length = 293

 Score = 73.4 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 97/299 (32%), Gaps = 23/299 (7%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           + +   GL+++ G + +++L       +GAY+  ++   +G +    +P   + +   G 
Sbjct: 18  FSLIGIGLNLIFGVMRIINLAHGQFIVLGAYAAWLVSRHFGFNPLWGVPTVIVAAIVIGY 77

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
            +    +           L     F  +    + +T    G            +    + 
Sbjct: 78  PLYYAVVPRLQRSGDPEMLSFILFF-GVGQMLEALTGLGFGADQRSLPSEALGSGNLGVF 136

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
              FP S+       ++          ++ L+  RT +  A R I  +++   +    + 
Sbjct: 137 GQEFPDSW-------WWAAGVSIAAIVALWLYFTRTRLGYATRAIMASREEALATGINVN 189

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
                AF    A  G+AG F       +SPD    S      +IVI+G + +        
Sbjct: 190 KVSALAFVAGLALAGVAGVFLPYLLGSVSPD-LGDSLTTTSFAIVIIGSLGNPLGTIIGG 248

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
            +      L       + N               +  + L +++L+R   LL     S 
Sbjct: 249 LVFGLGTMLMQTYYSSWSN--------------LVPYVLLLVIVLIRPTGLLGKAVRSV 293


>gi|288932495|ref|YP_003436555.1| branched-chain amino acid ABC transporter permease [Ferroglobus
           placidus DSM 10642]
 gi|288894743|gb|ADC66280.1| inner-membrane translocator [Ferroglobus placidus DSM 10642]
          Length = 348

 Score = 73.4 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 41/324 (12%), Positives = 108/324 (33%), Gaps = 23/324 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + ++ +   +Y + A  L+I  G  G+ +     A  IGA +   + +R  +++  +  V
Sbjct: 7   LVTILLWFGVYAIVAISLNIEYGYGGIPNFGRAFAVLIGALAVGAIVNRIFIALTGVSGV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   +           +     Y  +  L    +   +   +  +    +    +D L  
Sbjct: 67  TYSAASGFAKSKIDALISSNPAYGILILLFCVALAAVLGAIFGAMFILPSAKLKSDYLAI 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIF-------------------MYYVLLGMCFLSASIIL 199
               +  +     + ++ ++   +                      ++L    L   +  
Sbjct: 127 TLLAISEVSFIVSYYNTDIVGGYYGTPTPNVLAFVPGESREIAYTILILIFAALVFLLAE 186

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  +      + +R+++    S    ++  ++   A+ S+   + GA +      +S  
Sbjct: 187 RLMNSPYGRLLKAMREDEDVVESFGKDVMRIRIKTVALGSSLAAIVGALYTLYAGNVSGV 246

Query: 260 MFKFS---ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +  F+          +V+LGGM +   +   T + + V  L      +   +LL      
Sbjct: 247 VNLFARVNWTFYPFLMVLLGGMANNRGVLAGTFLFVAVWRLLDQY-KHEIAALLNLPFDV 305

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
           N     +    + LV+  +   L+
Sbjct: 306 NWLQYIIFGALMILVLYYKPEGLI 329


>gi|83749024|ref|ZP_00946031.1| LivH [Ralstonia solanacearum UW551]
 gi|83724287|gb|EAP71458.1| LivH [Ralstonia solanacearum UW551]
          Length = 342

 Score = 73.4 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 49/321 (15%), Positives = 110/321 (34%), Gaps = 27/321 (8%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
            + +     L+  M + GL+++   +G+L+      Y +GAY   ++        W  + 
Sbjct: 34  NLLNGVSYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYVISVHL--GFWSALI 91

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            + ++ GA G ++    L+    Y  +A L+ +     ++ +   +  G         L 
Sbjct: 92  AAPLLVGALGALVERFGLRTVHRYGHVAELLFTFGLAYLIEEGVKLVWG---------LP 142

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   V   +    F      +  +  +++L    +   I L L RT I    +    + 
Sbjct: 143 AVPYRVPEALDGPLFTLFTSSFPKYRAFMMLVSLLMLVGIFLLLTRTRIGLVIQAALTHP 202

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +L   +    +  F    A  G+AG         ++      +   IV  + ++GG
Sbjct: 203 DMVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NAFVTEPSMAAAVGSIVFVVAVVGG 260

Query: 278 MTSLSKIAKATAILIGVVEL--------------CCGMNFYYFNSLLKFDCSFNMRHTTL 323
           M SL     A+ ++  +                    +       +  ++ +       L
Sbjct: 261 MGSLVGAFIASLLIGCIQTFAVTLDLSVASLLGKLGVVLNPDVPLISVWNLTIAQVAPVL 320

Query: 324 MVIALFLVILMRSHSLLRLRT 344
             + L L+++ R   L+  R 
Sbjct: 321 PYLLLVLMLIFRPRGLMGTRE 341


>gi|294083918|ref|YP_003550675.1| inner-membrane translocator [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663490|gb|ADE38591.1| inner-membrane translocator [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 279

 Score = 73.4 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 70/306 (22%), Positives = 127/306 (41%), Gaps = 37/306 (12%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y   +   + I ++FA  L+++ G  G +SL       IGAY+  IL       + +  
Sbjct: 2   TYEIVVLTNMAISILFALSLNVITGFCGQVSLGHAAFLGIGAYTSAILSKAGIP-LIITF 60

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +  ++G  G+I+G+ SL+ R D+LAI T+ +  +F  I+ K + I  G+ GI      
Sbjct: 61  IPAMGMAGLVGLIVGIASLRVRHDFLAITTMGVVFLFTGIVRK-QEILGGEIGIAGIPAP 119

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
            F                      + +  +            +W+ ++    A+ +I ++
Sbjct: 120 DFGR--------------------LGLLVLSFLCVLAYLFFTIWISKSWTGFAFDSIAED 159

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +     L   +   KL AF V +A  G+AGA +A     I PD F F E+I V+++VI+G
Sbjct: 160 EDTARLLGINVPKFKLFAFVVGTAGAGLAGALYAHQVRFIGPDSFGFVESISVLAMVIVG 219

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+  +  A A L  + +    ++ Y                  +  + LF  +    
Sbjct: 220 GIGSIWGVILAAAFLSVLPQFFQVIDDY---------------KLLVYGLLLFGAMRFAP 264

Query: 337 HSLLRL 342
             +  L
Sbjct: 265 DGVDGL 270


>gi|225686717|ref|YP_002734689.1| inner-membrane translocator [Brucella melitensis ATCC 23457]
 gi|256262149|ref|ZP_05464681.1| branched-chain amino acid ABC transporter [Brucella melitensis bv.
           2 str. 63/9]
 gi|225642822|gb|ACO02735.1| inner-membrane translocator [Brucella melitensis ATCC 23457]
 gi|263091850|gb|EEZ16172.1| branched-chain amino acid ABC transporter [Brucella melitensis bv.
           2 str. 63/9]
 gi|326411116|gb|ADZ68180.1| inner-membrane translocator [Brucella melitensis M28]
 gi|326554407|gb|ADZ89046.1| inner-membrane translocator [Brucella melitensis M5-90]
          Length = 331

 Score = 73.4 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 54/328 (16%), Positives = 127/328 (38%), Gaps = 33/328 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +   L+  +         +     +++L + +FA   ++++G  G+LS      +
Sbjct: 25  LSAIVLGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 80

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              AY        +G+S  L + +  + + A G+++G  +++ +G Y  + TL ++++F 
Sbjct: 81  GAAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              ++                       ++ + R F F    +   + MYY +L +  L 
Sbjct: 141 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              I  +  +      +++R+N+    SL  ++   KL+AF +S+   G+AG   A    
Sbjct: 187 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 246

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             +     +  +  VI + +LGG+ +L       A ++ +       +F           
Sbjct: 247 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 297

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 T +  +     +L+    ++  
Sbjct: 298 ------TIVTGLIFMACVLLFRKGIIGE 319


>gi|328545195|ref|YP_004305304.1| Hydrophobic amino acid ABC transporter (HAAT) family, permease
           [polymorphum gilvum SL003B-26A1]
 gi|326414937|gb|ADZ72000.1| Hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Polymorphum gilvum SL003B-26A1]
          Length = 290

 Score = 73.4 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 102/310 (32%), Gaps = 27/310 (8%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y+    +   IY + A G++++   L    L       +GA+  +   + +G+   
Sbjct: 6   LVNFYLVPGLVIGSIYALGAVGITLIFAILRYAHLAHGDLATLGAFVALAAVTGFGIPPL 65

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             +PV+ +++    + +     +       I T++ S     ++     +  G       
Sbjct: 66  AALPVAVVVTALVAVGIDRTFYEHLRARPKIVTVMSSLGVALMIRAVVQVIWGVDTQTYV 125

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             +          +R                Y +L M  L  ++ L+L R+    A R +
Sbjct: 126 RGIVRPEDYFGLRLRDREI------------YTVLAMLALVGALQLFLARSKWGKAMRAM 173

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            DN                  + +S A    AG F   + +     M  +   + + +  
Sbjct: 174 SDNPNLALLSGIDNRKVVTLTWLISGALCAAAGVFLGLNTEV--KSMMGWHMLLPMFAAA 231

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ILGG+  +        ++    EL   +    + + + F               L LV+L
Sbjct: 232 ILGGVGRVEGAVLGGLVVGIAEELSVLVLPTEYKAAMAFS-------------ILLLVLL 278

Query: 334 MRSHSLLRLR 343
           +R   LLR +
Sbjct: 279 VRPTGLLRGK 288


>gi|260437004|ref|ZP_05790820.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Butyrivibrio crossotus DSM 2876]
 gi|292810313|gb|EFF69518.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Butyrivibrio crossotus DSM 2876]
          Length = 294

 Score = 73.4 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 94/307 (30%), Gaps = 23/307 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +      +Y + A G ++V G   +L+        IG Y    +    G +++  +
Sbjct: 6   TYVFNGISLGSVYAIIALGYTMVYGIAKMLNFAHGDVIMIGGYVLFSMIYGSGTNVFAAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V+ ++    G+++   + K   +  ++A LI +     +L     +             
Sbjct: 66  IVAMVVCTVLGVVIEKVAYKPLREASSLAVLITAIGVSILLQNIAQLI-----------F 114

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                  R+ I+           E     +++    +  ++ +++R+T    A   + ++
Sbjct: 115 TSQPKMFRNPIKLGSVKMFGANIEGSTILMIVLGIIIVVALSIFIRKTKTGRAMLAVSED 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       FA+ SA   +A      +   + P        I      + G
Sbjct: 175 KDAAKLMGINVNTTITITFAIGSALAALASLLMFNAYPSLIPTS-GSMPGIKAFVAAVFG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        +L  +  L                    +                + 
Sbjct: 234 GIGSIPGAMVGGIVLGIIEVLSGAYIPNGTKLANAIVFVVLIVVLIF-----------KP 282

Query: 337 HSLLRLR 343
             L   +
Sbjct: 283 TGLFGKK 289


>gi|328479459|gb|EGF48734.1| branched-chain amino acid ABC transporter permease [Lactobacillus
           rhamnosus MTCC 5462]
          Length = 157

 Score = 73.4 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 15/163 (9%)

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  ++  +I+    +    A   IRD+  A  S+       KL+AF + +A   + G+ 
Sbjct: 2   VLMCVTTVVIVNFVHSRSGRAIMAIRDDDIAAESIGINPTKWKLAAFVLGAATAAIGGSL 61

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            A+    I+P  F    +I ++ IV+LGG+ S++    A  +L  +  +           
Sbjct: 62  HASYLQTIAPGDFGIMNSISLLIIVVLGGVGSMTGTFVAAIVLGVIDTVLQNF------- 114

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                         +  +AL L+++ +   LL     S   +R
Sbjct: 115 --------GTLRMVIYALALILLMVFKPSGLLGHYELSFSRKR 149


>gi|220909612|ref|YP_002484923.1| inner-membrane translocator [Cyanothece sp. PCC 7425]
 gi|219866223|gb|ACL46562.1| inner-membrane translocator [Cyanothece sp. PCC 7425]
          Length = 287

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 89/303 (29%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      I  + A GL++  G L L +         GAY  ++  +        ++  
Sbjct: 8   LVNGVAVGSIIALAAVGLTLTFGILRLPNFAHGDLMTTGAYLTLLANTTGINIWLSILLG 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   +    +   L     R   +   TLI+  I   + ++   I               
Sbjct: 68  AGGTAILTLIGEKLIWSTMRERRVTSTTLIIISIGLALFLRNGIIFIWGGENQRYHLPVA 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +             +    +   V+       A +   L+ T +    R + D+  
Sbjct: 128 SAVNLLG-----------LKIVYYDLVVVGLTVLALAGLHTLLQNTKVGKGMRAVADDLD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   +    L  + ++ +   ++G  +             +   + + + VILGG+
Sbjct: 177 LARVSGIDVDRIVLYTWLLAGSLTALSGGMYG--LITAVRPNMGWFLILPLFAAVILGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +         I+    E+                   +     + +I + +V+L+R   
Sbjct: 235 GNPYGAIAGAFIIGITQEVSTYWIP-------------SEYKLAVALILMVVVLLIRPQG 281

Query: 339 LLR 341
           L R
Sbjct: 282 LFR 284


>gi|148557921|ref|YP_001257108.1| branched-chain amino acid ABC transporter permease [Brucella ovis
           ATCC 25840]
 gi|148369206|gb|ABQ62078.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ovis ATCC 25840]
          Length = 406

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 106/311 (34%), Gaps = 26/311 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                + + +  IQ+LI  +FA   S++ G  G+LS      + +G+++ V   + +G  
Sbjct: 20  PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHAMNAFGGE 79

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L  P+  +     G++ GL +  F      +   +++     +L    P   G  G  
Sbjct: 80  GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFGGE 139

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                + +                       +YY+ L     S  ++  L  T       
Sbjct: 140 AGVSSFRMPAW-----------GFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R+N      L   +       FA+S+ F G+AGA  A + +  +  +F+   +  V+ 
Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
              +GG+ +    A   A +     +   +   +                    +   LV
Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLIFVLV 293

Query: 332 ILMRSHSLLRL 342
           ++     L+  
Sbjct: 294 MMFLPRGLVGE 304


>gi|213028256|ref|ZP_03342703.1| leucine/isoleucine/valine transporter permease subunit [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 132

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 15/138 (10%)

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +R+++ A  SL  +    KL+AF +S+AF G AG  FAA +  +SP+ F F+E+  V++I
Sbjct: 1   MREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFAESAFVLAI 60

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           V+LGGM S   +  A  +L+   EL    N Y                  ++   + L++
Sbjct: 61  VVLGGMGSQFAVILAAVLLVVSRELMRDFNEY---------------SMLMLGGLMVLMM 105

Query: 333 LMRSHSLLRLRTPSNFLE 350
           + R   LL +  P   L+
Sbjct: 106 IWRPQGLLPMTRPQLKLK 123


>gi|319780033|ref|YP_004139509.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317165921|gb|ADV09459.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 346

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 68/331 (20%), Positives = 133/331 (40%), Gaps = 16/331 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++ V+     +  +    S    +++ +  L   +   GL+I+ G  G +SL      A 
Sbjct: 18  VVPVLLLAFAYGVVPLIGSSYVFEAILLPFLALSLAGVGLNILTGYAGQVSLGSAAFMAA 77

Query: 77  GAYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GA++      R      +  I ++ +++ A G++ GLPSL+ +G YLA++TL      Q 
Sbjct: 78  GAFAAYNFNLRVEGLPLIGSIFLAGIVAAAIGIVFGLPSLRLKGFYLAVSTLAAQFFVQW 137

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L K+   +N  A   +                        +   +  Y   L +  +  
Sbjct: 138 ALTKFSWFSNNSASGVIDAPRL-------------SISGLALDGAVGRYLFALTIVTVLT 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRD 254
            +   L  +     +  IRDN+ A   +   ++  KL AFA+SS  IG+AG  +A A   
Sbjct: 185 FLAYRLVSSQTGRNFIAIRDNETAARIIGIPVLRTKLLAFAISSFIIGVAGVIWAFAYLR 244

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            + PD F    +  ++ I+I+GG+ S+       A+++        +  +    L     
Sbjct: 245 TVEPDGFDLDRSFQILFIIIIGGLASIRGAFFGAALILVFPLALSRLGGFLLGDLFDSGV 304

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
             +M    ++   + L +++    L+ L   
Sbjct: 305 -LDMSQRIVLGALIILFLILEPDGLVALWDR 334


>gi|118431912|ref|NP_148668.2| branched-chain amino acid ABC transporter, permease protein
           [Aeropyrum pernix K1]
 gi|116063235|dbj|BAA81539.2| branched-chain amino acid ABC transporter, permease protein
           [Aeropyrum pernix K1]
          Length = 309

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 116/322 (36%), Gaps = 23/322 (7%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L +   L     + +  +M    L+Y + A   ++++G  GL SL   + + +G Y+ 
Sbjct: 1   MILAVAPVLLDLAGKPFYVNMIFLSLMYGISAMAWNLLMGYTGLFSLGHAVFFGVGGYTV 60

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
           ++L  RY ++ W+ +PV+ + +      +  P L+ R  +  +AT+ + EIF+     W 
Sbjct: 61  IVLALRYNVTPWIGLPVAGLTAAMLAAALSPPLLRLRSHWFTLATIALGEIFRLSFAHWD 120

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            +                                         Y+ + +  +    +  +
Sbjct: 121 YVGASAGLQMPISERSIYYVQFAGAT--------------VYSYIAMAILAVELLFLWKI 166

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +      +TIR+++    +L       K  +  +S+ F G+AG  +A     + P   
Sbjct: 167 INSKTGFYMQTIREDELVAQTLGINTFNYKALSLVISAFFTGLAGGLYAMRFRYVDPFAV 226

Query: 262 K--FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
               + +  +    I+GG+ +       + I + + E         F  +          
Sbjct: 227 FDLITISTYIAIAGIIGGIYTFLGPQVGSFIFVPISEYVRANIVQAFPRVYG-------L 279

Query: 320 HTTLMVIALFLVILMRSHSLLR 341
           H  ++ + L L+ L     +L 
Sbjct: 280 HVAVLGVILLLISLFAPEGVLG 301


>gi|332160314|ref|YP_004296891.1| Inner-membrane translocator [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325664544|gb|ADZ41188.1| Inner-membrane translocator [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 348

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 93/309 (30%), Gaps = 17/309 (5%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
              +       L++   A GL+ + G  G+LS      + +  Y+Y ++   +G  +   
Sbjct: 38  DSAMIGDFSYFLLWTFCAIGLAAMWGHGGILSFGQTAFFGLAGYTYGVMTLNFGDGVLST 97

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
                M       +            +    + +  +   ++++            +   
Sbjct: 98  WSGLIMALLVAAAVAAALGYLMFYGGVTGIFIGIVTLSFTLVLETFMSQTAGPQWAIGSA 157

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEI---FMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                  +  +           +  +     YY+++ +       +  L  +       +
Sbjct: 158 RLNGFNGMSGMPPLSLPWFGGELLTLEGNSFYYLIILLLAGVYWAVRRLLHSNFGLTLAS 217

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           IR+N +    L   I   +L  F +     G++GA +      I+P     +   + +  
Sbjct: 218 IRENPRRAEMLGIDIRRYQLLVFVLGGVLSGLSGALYTLWGSYITPSSMGLTAAAMPVIW 277

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           V   G  ++      TA+L+ + +                    +     L+   L  V+
Sbjct: 278 VATAGRKNIFGTVVITALLVWLSQWLAIYG--------------SEYAMILLGAILLFVV 323

Query: 333 LMRSHSLLR 341
           L   + LL 
Sbjct: 324 LAAPNGLLP 332


>gi|17988685|ref|NP_541318.1| high-affinity branched-chain amino acid transport system permease
           protein LIVM [Brucella melitensis bv. 1 str. 16M]
 gi|17984493|gb|AAL53582.1| high-affinity branched-chain amino acid transport system permease
           protein livm [Brucella melitensis bv. 1 str. 16M]
          Length = 331

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 130/337 (38%), Gaps = 33/337 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +   L+  +         +     +++L + +FA   ++++G  G+LS      +
Sbjct: 25  LSAIVLGIALVGLIAAPFMVYPIF----LMKMLCFALFASAFNLLLGYTGILSFGHAAFF 80

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              AY        +G+S  L + +  + + A G+++G  +++ +G Y  + TL ++++F 
Sbjct: 81  GAAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              ++                       ++ + R F F    +   + MYY +L +  L 
Sbjct: 141 FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              I  +  +      +++R+N+    SL  ++   KL+AF +S+   G+AG   A    
Sbjct: 187 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 246

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             +     +  +  VI + +LGG+ +L       A ++ +       +F           
Sbjct: 247 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALKNWLATSDFPV--------- 297

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 T +  +     +L+    ++     S   ++
Sbjct: 298 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 328


>gi|83311971|ref|YP_422235.1| ABC-type branched-chain amino acid transport system
           [Magnetospirillum magneticum AMB-1]
 gi|82946812|dbj|BAE51676.1| ABC-type branched-chain amino acid transport system
           [Magnetospirillum magneticum AMB-1]
          Length = 329

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 55/319 (17%), Positives = 107/319 (33%), Gaps = 24/319 (7%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
              +  L  +    ++      I+I  + A  L ++VG  GL+SL     + +G Y   +
Sbjct: 22  FPAWGPLAFSAKYAFLLQKLTGIMILAILAMSLDLLVGVAGLVSLGHAAFFGLGGYMLAL 81

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L  +Y  +   ++  +AM + A    +             I   +              +
Sbjct: 82  LSPQYEAANAWVVLPAAMGAVAAVSAVVGFLAIRTAGIYFIMVTLAFGQMGYYFFNDSKL 141

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G  G Y+  +           +  F      +  +   ++V+LG        +  +  
Sbjct: 142 AGGSDGAYIYVKP---------NVEAFGITLVNLESKQAFFFVVLGCLVAVYLWLRVVLA 192

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           +        I  N+     L    +  KL AFA++ A  G+AG   A     +SP M  +
Sbjct: 193 SPFGRVLAAIGVNEGRVRGLGFNPMVYKLVAFALAGALAGLAGFLAATQYGFVSPAMLGW 252

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            ++  V+ +VILGGM +L        IL         +  ++                  
Sbjct: 253 HQSGHVLVMVILGGMGTLFGPVLGAFILELAHFGLEAVTEHW---------------LLP 297

Query: 324 MVIALFLVILMRSHSLLRL 342
           M + +  ++L     +  L
Sbjct: 298 MGVLVITIVLALPKGVAGL 316


>gi|312199577|ref|YP_004019638.1| ABC transporter [Frankia sp. EuI1c]
 gi|311230913|gb|ADP83768.1| ABC transporter related protein [Frankia sp. EuI1c]
          Length = 1092

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 63/319 (19%), Positives = 118/319 (36%), Gaps = 9/319 (2%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A++  + + + L          +       + M    + ++VG  G LSL  +    + A
Sbjct: 311 ALIVAMTVAICLIWYALPVDWVNALDVNAQWAMLILSVVVLVGLTGQLSLAQLAFSGVAA 370

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
                L +  G  +   + +  + + A G++  LP+L+ RG  LA+ TL +     +IL 
Sbjct: 371 LIAGRLVAVRGWPLEAALALGVLGTAALGVLFALPALRTRGLQLAVVTLGLGAAADSILF 430

Query: 139 KWKPITNGKAGIYVADR--LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           +    T    G   A    L     T+      F      V        + L    + A 
Sbjct: 431 QRGYHTPPPPGSAAAAFGVLGDPEGTIVGHQTLFGVRLDTVEAPRAFATLSLLSFGVLAV 490

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  LRR  +      +R N++A  +L  +++ AKL AFA+S+A  G  G  FA      
Sbjct: 491 AVANLRRGRVGRRLIAVRTNERAAAALGISVVGAKLYAFALSAAIAGYGGVLFAFYTYGA 550

Query: 257 SPDMFK------FSENIIVISIVILGGMTSLSKIAKATAILIG-VVELCCGMNFYYFNSL 309
             ++           +I++I+  +LGG+  +S          G +              +
Sbjct: 551 RGNIDYGGGLFSPFTSILLIAFAVLGGVGWVSGAFAGATWATGALGTRLGAWIGDLLTGV 610

Query: 310 LKFDCSFNMRHTTLMVIAL 328
             F  +      T++  +L
Sbjct: 611 AAFARTVIALLGTVVGFSL 629



 Score = 54.1 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 92/290 (31%), Gaps = 12/290 (4%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y         +Y + + G+ IV    G+L+L      A  AYS+      + L  W    
Sbjct: 7   YALLGLGTAGLYALMSAGIVIVQRGSGVLNLAHGALLAWAAYSFHGAAVVWSLPTWFAAV 66

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           ++   +   G++  L  ++   D  A+  ++ +     IL     +    A       L 
Sbjct: 67  LAVGSTALIGLLFHLLVMRPMRDGSALTRVMATLGLLIILQAMLTLIYSTAVRSSPTVLP 126

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
               T+  +   +       +    +           A +    R T I  A   + +N 
Sbjct: 127 TGNVTLFGMPVDWGVFVRLGVVGAVL-----------AGLWALFRHTTIGLAATAVTENP 175

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +A  +   +       A+ + +A  G+AG   A  +  +          +  ++I ++ G
Sbjct: 176 RAAATFGWSPDLVAAGAWTLGAALAGLAGVLLAPLQQPLGAPNL-MLLIVPALAIGLVAG 234

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             S   +  A+ +L  V             +    D +  +      +  
Sbjct: 235 FRSFPAVFVASVVLAIVEVETQVQLVSKHPAWRGVDRAIPLLVIVFYLAI 284


>gi|163740305|ref|ZP_02147699.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161386163|gb|EDQ10538.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
          Length = 297

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 91/302 (30%), Gaps = 22/302 (7%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +       Y + A GL++V   +GL++        I  Y+ +  G    +S  L +P++
Sbjct: 9   VNAFALGGTYALLALGLAVVFSIMGLINFAHGELMTISGYTLMYCGIAG-VSFVLAVPLA 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             ++    ++M   + +   +      L+ S     IL                      
Sbjct: 68  IAVAMIAAILMERIAFRPVRNSSGATMLVTSFAVSMILQVLFQNFIST----------RS 117

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +   I      +  ++  +     +     +   + ++++R     A R   ++   
Sbjct: 118 QPVLLPQILSDSVNAFGLVIGVNKIAAIATTIVMLVFLDIFMKRQKTGIAMRAAAEDFNV 177

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +          AFA+S    G+A   + + R  + P M  F   +      ILGG+ 
Sbjct: 178 ARLMGIRANTVIAGAFALSGMLAGVAAVLWVSQRSSVDPHM-GFLPVVKAFIAAILGGLG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           SL        +L  +                +      +    L           R + L
Sbjct: 237 SLRGAVAGGFLLGFIEIYLAAFLPPELQEFREPIGLSLVVVVLL----------FRPNGL 286

Query: 340 LR 341
           + 
Sbjct: 287 IP 288


>gi|149378161|ref|ZP_01895879.1| inner-membrane translocator [Marinobacter algicola DG893]
 gi|149357565|gb|EDM46069.1| inner-membrane translocator [Marinobacter algicola DG893]
          Length = 287

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 47/302 (15%), Positives = 91/302 (30%), Gaps = 27/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A GL++V G L + +      Y +GA+         G   W+ +  
Sbjct: 8   IINGLTLGSIYGLVALGLTLVYGILHIPNFAHGALYMVGAFMSYFFMVDLGAHYWIAMAG 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           SA +     ++              I   I +      L     +  G     ++     
Sbjct: 68  SAAVVAVLAILCERLVFHPLRHSPPIHDKIAAIGILLFLEAVVQMFWGSDFRRMSSPFTG 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +                 +I       ++ G   L  ++ L+LR+T        +  +++
Sbjct: 128 IM------------NFDGLIIPEQRLLIIAGAFVLVVALQLFLRKTMTGATIIAMAQSRE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
             F +        +  FA+S      A   +A     +          +    I+ILGGM
Sbjct: 176 GAFLVGIDANRVAMMTFAISGMLAAFAATLYAP--INLVYPAMGHLVIMKAFVIIILGGM 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+     L        +  ++ F               L L++ +R   
Sbjct: 234 GSVPGAIAGGMIIGFAEALGGFYISTSYKDIIAFG-------------LLVLILSVRPQG 280

Query: 339 LL 340
           L 
Sbjct: 281 LF 282


>gi|19552158|ref|NP_600160.1| ABC-type transporter, permease component [Corynebacterium
           glutamicum ATCC 13032]
 gi|62389822|ref|YP_225224.1| branched chain amino acid ABC transporter permease [Corynebacterium
           glutamicum ATCC 13032]
 gi|21323698|dbj|BAB98325.1| ABC-type transporter, permease components [Corynebacterium
           glutamicum ATCC 13032]
 gi|41325157|emb|CAF19638.1| Branched-chain amino acid ABC-type transport system, permease
           component [Corynebacterium glutamicum ATCC 13032]
          Length = 359

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 50/314 (15%), Positives = 99/314 (31%), Gaps = 18/314 (5%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               +  ++  +++ Y + A G+ +  G  G+L+L   + + IGAY   +        I+
Sbjct: 47  FLSTFQLTLMSRLVCYAIVAVGIGLAWGRGGMLTLGQGVFFGIGAYIMAMHMLYSDSQIF 106

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI----FQNILIKWKPITNGKAG 149
                      A   +  +  +   G    +    + +         ++           
Sbjct: 107 GTTVPQWWSIFANPAVALIAVVALPGIVAFVLGFSIFKRRIKGAYFAIVNQALAAAVVVL 166

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +            +     F  F     I  I  Y+  +G+     +I  WL R+     
Sbjct: 167 LVGQQDSLGGSNGLSGFRSFMGFAVYDPINRIMFYFTAVGVLLALVAISYWLMRSRYGEL 226

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
               RD ++    L       K +A+ +++   G+AGA F      ISP       +I+ 
Sbjct: 227 LVATRDAEERVRFLGYDPALIKTAAYVIAAMIAGIAGALFVPIVGIISPAEIGVVPSIVF 286

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           +  V  GG  SL        +L  V                    +F    +      L 
Sbjct: 287 VIAVAAGGRASLFGPVVGALVLGWVESTL--------------AQTFPSMWSYFQGAILV 332

Query: 330 LVILMRSHSLLRLR 343
           LVI++    +  ++
Sbjct: 333 LVIVLLPGGIASIK 346


>gi|242277714|ref|YP_002989843.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638]
 gi|242120608|gb|ACS78304.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638]
          Length = 300

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 82/304 (26%), Gaps = 18/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++      +A G Y  VI  S            
Sbjct: 8   LINGITLGSVYALIALGYTMVYGIIQLINFAHGEFFAAGGYVGVIFMSYLLAQGAPAWVC 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            +           + ++                      +             +      
Sbjct: 68  LSGSLILAMAYCAMLAMAVEKVAYKPLRSSSRLSVLLSALGMSIF----LQNGLMLTQGV 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 + +    F    V+      +++    FL  ++   + +T I  A R+   ++ 
Sbjct: 124 YDRPYPTELTQGGFEFGTVMLSYMQLFIVSLTAFLLVALNFLVFKTRIGKAMRSTAQDKI 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           FA+ +     AG         +      F   I   +  +LGG+
Sbjct: 184 MSALVGINSNRIISLTFAIGAGLAAAAGIMVGLYYGSV-RYDMGFVPGIKAFAAAVLGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +++       I+  V     G     +  +  F             + L  V+  R   
Sbjct: 243 GNITGAMIGGFIIGMVEIFAAGYISGEYKDVFAF-------------LILIGVLYFRPSG 289

Query: 339 LLRL 342
           ++  
Sbjct: 290 IMGE 293


>gi|168334626|ref|ZP_02692775.1| inner-membrane translocator [Epulopiscium sp. 'N.t. morphotype B']
          Length = 367

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 97/348 (27%), Gaps = 28/348 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             ++ ++  ++  L                + + Y + A G+ ++ G  G+LSL   + +
Sbjct: 10  FAVIVIILAMVPVLLQLNLIGGSSTVIFIGKCMAYAIVAIGIDLIWGYTGILSLGHGLYF 69

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+G Y   +          +   +         +I  +        +  IA         
Sbjct: 70  ALGGYGMAMYLKLVSTGGEITDFMRVGGIEELPLIWKIFEYLPNAMFFMIAIPAAVSFLV 129

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE-------------- 180
             ++    +      I      + + +   SL  +          +              
Sbjct: 130 GYMMFKNRVKGVYFSIISQALTWAMYSIFISLSPYTNGNVGITEIKSLFGSVKGDANRGN 189

Query: 181 -IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              ++Y  L +  L      +L           IRD +   +    ++   K   +  S+
Sbjct: 190 MFLLFYATLAVLILVYVFAKFLVGRKFGRVLVAIRDGENRTYFSGYSVSLFKTFVYVXSA 249

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
               +AGA F      I+P       +I+++  V +GG  ++        ++        
Sbjct: 250 VIAAVAGAIFVNFNGSITPSEMTIEFSIMMVIWVAVGGRGTIIGAVIGAFLINIGQYNLS 309

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                           F      ++     L IL     L+ L     
Sbjct: 310 S-------------GIFVEAWQYIIGAVFCLTILFFKGGLVGLAKEQI 344


>gi|186685164|ref|YP_001868360.1| inner-membrane translocator [Nostoc punctiforme PCC 73102]
 gi|186467616|gb|ACC83417.1| inner-membrane translocator [Nostoc punctiforme PCC 73102]
          Length = 317

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 55/288 (19%), Positives = 107/288 (37%), Gaps = 30/288 (10%)

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGS---------RYGLSIWLLIPVSAMISGACGMIMGL 112
             G LSL     YA+G Y   IL +              + L + ++ +ISG   +I+G+
Sbjct: 30  MAGQLSLASPGFYALGGYIAAILSTKLFPSSNNLFPIPLLLLEMLIAGLISGILAVIVGI 89

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
           P+L+ RG YLAIAT+   E+ + + +    IT G  GI+   + +               
Sbjct: 90  PALRLRGIYLAIATIAFVEVLRVVSLNL-DITGGAVGIFGIPQPFQSQ------------ 136

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
                   I   ++ + +  +S  +   L R     A+  IR+++ A  ++     + K+
Sbjct: 137 --------IEYLWIAVPLLLVSMVLFYRLERIRTGRAFIAIREDELAASAMGINPTYYKV 188

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
            AF + +    + G   A   +  +     F   I  ++IV++GG  +         +L 
Sbjct: 189 LAFTLGAVLAAIVGVISAHFLNTWNARQGTFDAGITYLTIVLIGGSRTFLGSVVGAIVLK 248

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
            ++E+                         +  I + L  +      +
Sbjct: 249 VLLEIILRRIADIAGLPNWLAQFLRDGRLIIYGILIVLGTIFFPQGFV 296


>gi|320011375|gb|ADW06225.1| inner-membrane translocator [Streptomyces flavogriseus ATCC 33331]
          Length = 310

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 102/311 (32%), Gaps = 19/311 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA------YSYVILGSRYGLSI 92
           + +      +Y + A G ++V G + L++      + IG       Y  +  G+   + I
Sbjct: 8   LANGLALGALYGLIAIGYTMVYGIVQLINFAHGEIFMIGGFGALTTYLALPSGTSLMVVI 67

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            L+I   A+ S A        + +       +A LI +     +L +             
Sbjct: 68  PLMIIGGAIASVAVATAAERFAYRPLRGAPRLAPLITAIGLSIVLQQLVWGF-------- 119

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                    +              +  +    ++L+       ++ +++ ++    A + 
Sbjct: 120 -YPDAKKPRSFPEFKGESFKIFDNLYLQRADAFILVLAPLCMLALGMFVAKSRSGRAMQA 178

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
              +      +        + AFA+ +AF  +A   +   + +I+ +M  F   +   + 
Sbjct: 179 TAQDPDTAKLMGINTDRIIVMAFAIGAAFAAIAAVAYGLDKGQINFEM-GFLLGLKAFTA 237

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            +LGG+ ++        +L     L                 ++      +++I + LV 
Sbjct: 238 AVLGGIGNIYGAMVGGVVLGLAEALSIAYIEEIPGMQQLGGGAWANVWAFVLLIVVLLV- 296

Query: 333 LMRSHSLLRLR 343
             R   LL  R
Sbjct: 297 --RPQGLLGER 305


>gi|227811755|ref|YP_002811765.1| ribose ABC transporter, permease protein [Vibrio cholerae M66-2]
 gi|229506704|ref|ZP_04396213.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           BX 330286]
 gi|229510502|ref|ZP_04399982.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           B33]
 gi|229517367|ref|ZP_04406812.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           RC9]
 gi|229605177|ref|YP_002875881.1| ribose ABC transporter permease protein [Vibrio cholerae MJ-1236]
 gi|254850397|ref|ZP_05239747.1| ribose ABC transporter permease protein [Vibrio cholerae MO10]
 gi|298499990|ref|ZP_07009796.1| ribose ABC transporter permease [Vibrio cholerae MAK 757]
 gi|227010897|gb|ACP07108.1| ribose ABC transporter, permease protein [Vibrio cholerae M66-2]
 gi|227014757|gb|ACP10966.1| ribose ABC transporter, permease protein [Vibrio cholerae O395]
 gi|229345403|gb|EEO10376.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           RC9]
 gi|229352947|gb|EEO17887.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           B33]
 gi|229357055|gb|EEO21973.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           BX 330286]
 gi|229371663|gb|ACQ62085.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           MJ-1236]
 gi|254846102|gb|EET24516.1| ribose ABC transporter permease protein [Vibrio cholerae MO10]
 gi|297541971|gb|EFH78022.1| ribose ABC transporter permease [Vibrio cholerae MAK 757]
          Length = 333

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 97/312 (31%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 35  LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   ++        + + + +P + +   A G I G+   K +        + M+     
Sbjct: 94  LCG-AFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMT----- 147

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G   +Y   R    G T  +    +      +   + ++ +++       
Sbjct: 148 -------LLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWY 200

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +      T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 201 LL----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 256

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 257 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 316

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 317 AKAVVILLAVLV 328


>gi|295680864|ref|YP_003609438.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295440759|gb|ADG19927.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 308

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 58/272 (21%), Positives = 109/272 (40%), Gaps = 21/272 (7%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 YI  +      + +FA    ++ G  G ++        +GAYS  IL +R+GL 
Sbjct: 24  PWWLSGYILGVLTVAFYFGVFAMSWDLLFGFAGEVNFGPTFLIGLGAYSAAILNARWGLP 83

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           I + +      +   G+++ +P+L+ RG Y  + TL+   + QN ++ +  IT G+ G+ 
Sbjct: 84  IPVCVLAGGGFALVGGLLLAVPALRLRGPYFGLVTLVAVLLLQNAIVIFAGITGGEIGMT 143

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           V D +                           Y++ L    + A ++  L R+A+    +
Sbjct: 144 VPDVMSVDANH--------------------NYWIALAFLIICAILLFGLSRSAVGLILQ 183

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS-PDMFKFSENIIVI 270
               +     +L   +   KL AF +S+ F G+AGA     +   S   +   S  + +I
Sbjct: 184 ASGQDATGAQALGFNVTRHKLVAFCISAVFSGVAGAMLVFYQGTASVSTVVDLSVGVQII 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
              +LGG  ++      +  LI   E    + 
Sbjct: 244 IAAVLGGRRTILGAVLGSIFLIVAGEFLRPLG 275


>gi|224418042|ref|ZP_03656048.1| ABC transporter permease [Helicobacter canadensis MIT 98-5491]
 gi|313141580|ref|ZP_07803773.1| abc transport system permease protein [Helicobacter canadensis MIT
           98-5491]
 gi|313130611|gb|EFR48228.1| abc transport system permease protein [Helicobacter canadensis MIT
           98-5491]
          Length = 299

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 93/290 (32%), Gaps = 11/290 (3%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +Y + A G ++V G L L++        +GA+      S  GL  +  +  +
Sbjct: 11  INGLSLGSMYALIAIGYTMVYGCLRLINFAHADIIMVGAFLSFFAVSSLGLPFYASVIFA 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +I    G+ +   +         I+ LI +      L     +  G    + +   +F 
Sbjct: 71  VVICMILGVGIDRVAYLPLRSAPRISMLITAIGVSFFLENLFNVLFGSTPRFFSSPEFFA 130

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T          F  S +        V +    L  +++ +L RT    A R    +   
Sbjct: 131 KT----------FNFSNISITYITIIVPIVTLILLVALLQFLYRTKQGMAIRATAFDINT 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +       F + SA  G+ G F+A S   I P M      +   +  +LGG+ 
Sbjct: 181 VRLMGINVNNIIGLVFVIGSALAGIGGIFYAISYPTIDPLM-GIMIGLKAFAAAVLGGIG 239

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           S+        IL     +   +          F   F +       + + 
Sbjct: 240 SVGGAVLGGFILGFTEVMAVAVFPELGGYKDAFAFLFLILVLLFRPVGIM 289


>gi|229059634|ref|ZP_04197012.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus AH603]
 gi|228719647|gb|EEL71246.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus AH603]
          Length = 286

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 50/301 (16%), Positives = 117/301 (38%), Gaps = 31/301 (10%)

Query: 54  WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIM 110
               +++G  G++S    + + IGAY   +L  R     ++ ++ I  + ++S     I+
Sbjct: 1   MSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSIMNFFIGIAAAIIVSAIVSYII 60

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
           G+ SL+ +  + A+ TL +S++F  +  KW+ +T+G  G        F            
Sbjct: 61  GMLSLRLKSHFYAMLTLAISQLFFVLAEKWRSLTHGGDGFTFRVPDIFRDRF-------- 112

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                        YY+          ++    +++I    + I  N++   +L   ++  
Sbjct: 113 -----------TFYYITFICLISIFILLRLFTKSSIGKVLKAISQNEQRVEALGYKVLHY 161

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           K+ A  V+     ++G  F  +   ++  +F     +  + + ++GG+ +L         
Sbjct: 162 KIIASVVAGGVATISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGVGTLI-------- 213

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              +       +  Y+ S L  +     R T ++ +   +V+L+    L+         +
Sbjct: 214 -GAIAGAGIIESLKYYLSELATEYPIFERWTIILGLLYIIVLLVFPKGLIGTVKKLKNFK 272

Query: 351 R 351
           R
Sbjct: 273 R 273


>gi|170740177|ref|YP_001768832.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168194451|gb|ACA16398.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 318

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 65/327 (19%), Positives = 117/327 (35%), Gaps = 29/327 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L  +  L     L          +  I  LI  +   G +++ G  G  S      +  
Sbjct: 6   VLPPLLALAALGALAFLGLSGSALNFLITTLIIALAGLGWNVLGGFGGQYSFGHAAFFGT 65

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQ 134
           GAY+  +L  R+G + W  +     +  A G ++G  S +   RG Y A+ TL  +E+F+
Sbjct: 66  GAYATAVLQLRFGWNAWAGLAAGIGLGTATGFLIGTLSFRAGLRGSYFALVTLAFAEVFR 125

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            IL     +T G AG+ +  +  F          F                ++LG    +
Sbjct: 126 -ILANAADLTGGAAGLLLTLQPGFGTMQFADRRLFC--------------LLVLGFVGAA 170

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                W+ R+        +R+N++A  +L    +  KL A A+S+A    AGA +     
Sbjct: 171 LLASRWIERSRFGAQLIAVRENEEAARALGVDALRVKLGAIALSAAITAAAGALYVQHFL 230

Query: 255 RISPDMFKFSEN-IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
            +   +   +   +  +   I+GG+ +          L G+ E    ++           
Sbjct: 231 YLDAGVAYGTWISVEALLAPIVGGIGTAFGPLVGALALQGLGEATKHLSG---------- 280

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLL 340
                    +  I L  VI      L+
Sbjct: 281 -GVPGLDLVVFGICLVAVIAFAPQGLI 306


>gi|332529305|ref|ZP_08405267.1| branched-chain amino acid transport permease [Hylemonella gracilis
           ATCC 19624]
 gi|332041222|gb|EGI77586.1| branched-chain amino acid transport permease [Hylemonella gracilis
           ATCC 19624]
          Length = 296

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 100/309 (32%), Gaps = 22/309 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I S  I   IY + A GL++  G + +L++       +GAY   ++ +++G+S  L+IPV
Sbjct: 10  IVSGLITGGIYALIALGLNLQYGLMRILNIAHGEFLMVGAYLTWLVQTQFGISPLLMIPV 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S  +  A GM++     +          +  +            + N  + ++  D   +
Sbjct: 70  SFAVLMALGMVLHFLCFRRLTRTSPNLDVFEARSLMVAFGLMFLVQNFVSWLWGGDLRGY 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T              + +      +       + ++I+ +R+T +    R +  +  
Sbjct: 130 DYLTEP-------VKFGEMQFAANKLLIFFLALLFAGALIVLMRQTLLGKGVRALMQSPT 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           F +     G+AGA  + +              +  + ++ LGG 
Sbjct: 183 GAQLMGIDTQKLHPLMFGIGLGLSGVAGALLSMAYTI--TPFMGQPYTVTALIVITLGGF 240

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L  +               L    +       L       V+L+R   
Sbjct: 241 GSMGGALVGGLFLGVIE-------------ALGMHFTNPSLKALLSYTVFIAVLLLRPEG 287

Query: 339 LLRLRTPSN 347
           L   ++   
Sbjct: 288 LFTRKSRKA 296


>gi|170704144|ref|ZP_02894749.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
 gi|170130946|gb|EDS99668.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
          Length = 408

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 57/298 (19%), Positives = 102/298 (34%), Gaps = 12/298 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L  V                 +     Q    V+ A   ++ +G+ GLLS       
Sbjct: 7   AGALRWVLFAACVALPAWLWPHGAMLGYLAQTAALVVLALSYNLQLGTTGLLSFGHAAFA 66

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GA++     +R G  + LL  V  + S   G I GL + +  G   A+ TL ++E   
Sbjct: 67  GLGAFAAAHWFNRVGGPLPLLPLVGGVASAGFGFIAGLLATRRAGTVFAMITLGLAECVA 126

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                      G  G+ +                   +           Y V+   C +S
Sbjct: 127 AAAWSVPAWFGGLGGVPI------------DRASGTPWGGWHFGAPAQAYAVIAAWCIVS 174

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +  L RT ++     +RDN     +L T     +L+    +S F G+AG       +
Sbjct: 175 ALAMRALTRTPLARLANAVRDNPARVAALGTEPRHVRLAMVTCASFFAGIAGTLTLIDVE 234

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
             +PD    + +  V+   ++GG  +    A    +L  +  +  G++  +   L   
Sbjct: 235 IATPDSLSMARSATVLIAAVIGGTGTFFGPAAGAVVLTMLSVVVAGVSRAWALYLGVL 292


>gi|33591537|ref|NP_879181.1| branched chain amino acid ABC transporter permease [Bordetella
           pertussis Tohama I]
 gi|33603394|ref|NP_890954.1| branched chain amino acid ABC transporter permease [Bordetella
           bronchiseptica RB50]
 gi|33571179|emb|CAE40681.1| probable branched-chain amino acid transport system, permease
           component [Bordetella pertussis Tohama I]
 gi|33577518|emb|CAE34783.1| probable branched-chain amino acid transport system, permease
           component [Bordetella bronchiseptica RB50]
 gi|332380876|gb|AEE65723.1| branched chain amino acid ABC transporter permease [Bordetella
           pertussis CS]
          Length = 321

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 61/279 (21%), Positives = 122/279 (43%), Gaps = 15/279 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           F  +       +  S   ++LIY + A  L++++G  G+++L     +  GAY+  ILG+
Sbjct: 18  FPLVAPALGLDFYISFVRRVLIYALAATSLNLILGYGGMVALGHAAFFGAGAYAVGILGA 77

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
               S  L  P +  ++GA   I G  SL+ RG Y  + TL  +++   + I  +     
Sbjct: 78  AGITSALLAWPAAIALAGALAWITGAISLRTRGVYFIMITLAFAQMVYYVFISLRQYGG- 136

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                             +L  +   P   +  ++  YY++L +  +   +   +  +  
Sbjct: 137 --------------EDGLNLSGYSTLPGLDLANDLTFYYLVLVLFAVLMGVFGRVVDSRF 182

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A + IR+N+    SL   +   KL+AF +S A  G+AGA  A     ISP +  ++++
Sbjct: 183 GAALQGIRENESRMESLGYPVYRLKLTAFVISGAAAGLAGALLANHNLFISPSLMHWTQS 242

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
             ++ +V++GG+           +++ + E+      Y+
Sbjct: 243 ANLLIMVLVGGIGLRYGGVAGAVVMLVLEEVLRQWTEYW 281


>gi|311693820|gb|ADP96693.1| branched-chain amino acid ABC transporter, permease protein [marine
           bacterium HP15]
          Length = 315

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 111/321 (34%), Gaps = 26/321 (8%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V P+ +   +        +    I    Y + + GL+++ G L +++      Y +GA +
Sbjct: 18  VSPMSMIFGVPLAVLSGQLLIGIINGAFYALLSLGLAVIFGLLKIINFAHGAMYMLGAMT 77

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
            V++    G++ W+ + ++ ++ GA G+ +    L+       I +L+++     I+   
Sbjct: 78  TVLMFDYLGVNYWVALLLAPLLVGAFGVAIEYFLLRRIAGQDHIYSLLLTFGVALIISGV 137

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
                G +G+                +        F+    +  +V++    +  +    
Sbjct: 138 LVNWFGVSGLRYTMP----------DMFKGGVNLGFMFMPYYRAWVIVAALVVCFATWFV 187

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           + +T +    R   ++ +        +       +    A    AG   A         +
Sbjct: 188 IEKTKLGAYLRAGTEDSQLMQGFGINVPLLISLTYGFGVALAAFAGVLAAPIYSV--TPV 245

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              +  I V ++V++GGM S+        ++  +  L                  +    
Sbjct: 246 MGSATLITVFAVVVIGGMGSIGGAIITGILMGVIEGLTKTF--------------YPPAS 291

Query: 321 TTLMVIALFLVILMRSHSLLR 341
           + ++ + + LV++ R   L  
Sbjct: 292 SAIIFLVMVLVLMFRPSGLFG 312


>gi|221640787|ref|YP_002527049.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131]
 gi|221161568|gb|ACM02548.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131]
          Length = 308

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 65/320 (20%), Positives = 113/320 (35%), Gaps = 28/320 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +LA+   +L  +         Y  +   +IL+   +A G +I  G  GLLSL   + +A 
Sbjct: 1   MLALHLAVLAGVAALQFVLPAYHHTNAARILVLATYAIGFNIAFGYTGLLSLGHALFFAG 60

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G Y+  +L  + G   W  +    +  G     +GL +L+  G    I TL+ ++ F   
Sbjct: 61  GMYATGLLVGQGGWQPWAALLAGPVAGGVLAAGVGLLALRTAGPAFMIVTLMFAQAFHLA 120

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           ++ W   T G  G                     R     +      Y     +   +  
Sbjct: 121 ILYWGRFTGGDEG-------------FTLSGAARRIGPFDLADPATRYGAAFLLFAAAML 167

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
             L L R+        +R+N++    L      AKL A A+S    G AGA +      +
Sbjct: 168 GCLALVRSRTGRVLIAVRENEERTRMLGYDTFRAKLLALALSGLLSGAAGATYGLMFGYV 227

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
                    +I+ +  V+LGG  ++      TA+L  +               + +  S 
Sbjct: 228 GGSFTAIQYSILPLIWVLLGGAGTVLGPLLGTALLFYL---------------IDWSSSV 272

Query: 317 NMRHTTLMVIALFLVILMRS 336
                 ++   L L+IL   
Sbjct: 273 TTASQFVVGAVLILLILFAP 292


>gi|114764371|ref|ZP_01443597.1| ABC transporter related protein [Pelagibaca bermudensis HTCC2601]
 gi|114543125|gb|EAU46143.1| ABC transporter related protein [Roseovarius sp. HTCC2601]
          Length = 816

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 41/317 (12%), Positives = 91/317 (28%), Gaps = 29/317 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++    +    +  ++     S + +  M        + A+G   ++   G + L+    
Sbjct: 512 MVAAAILFLGAVAGMWNPFYLSPRSLTGMMTFAATLALVAYGQQFLMMVSG-IDLSVGPT 570

Query: 74  YAIGAYS--YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +      + +L      S      +  +++ A G++  +     R  +  +ATL    
Sbjct: 571 MGLCQVVGSFFLLQELGPGSHVAGWVLLLLVAMAVGVVNWILVEGLRM-HPMVATLATFM 629

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
             Q I +  +P+  G                +   +         ++   F+  VLL + 
Sbjct: 630 AVQAISLILRPVPGG---------------MIDGDVMMALSMKVGIVPVTFIAAVLLAL- 673

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                +  WL R  +  + R +   Q+A  +       A+  A+   S   G+A     A
Sbjct: 674 ----VLEFWLYRREMGVSMRGLGSRQEAARTAGIRPKLARFVAYVGCSFLAGLAAITMIA 729

Query: 252 SRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                 P          + ++VI      GG  S          +  V  +   +     
Sbjct: 730 QVGIGDPRAGLTYTLGSIAAVVIGGASLFGGRGSFVGALLGAIFITQVNSVTVFLRLSQE 789

Query: 307 NSLLKFDCSFNMRHTTL 323
                            
Sbjct: 790 WQQYLLGFLILASVALY 806


>gi|228985061|ref|ZP_04145229.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228774749|gb|EEM23147.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 286

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 52/292 (17%), Positives = 115/292 (39%), Gaps = 31/292 (10%)

Query: 54  WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIM 110
               +++G  G++S    + + IGAY   +L  R      +  + +  + +IS     I+
Sbjct: 1   MSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFLIGLVAAIIISAIVSYII 60

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
           GL SL+ +  + A+ TL +S++F  +  KW+ +T+G  G        F            
Sbjct: 61  GLLSLRLKSHFYAMLTLAISQLFFVLAEKWRGLTHGGDGFTFGVPDVFRDRF-------- 112

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                        YYV L    +   ++    +++I    + I  N++   +L   ++  
Sbjct: 113 -----------TFYYVTLICLLIIFVLLRLFTKSSIGKVLKAISQNEQRVEALGYKVLHY 161

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           K+ A  V+     ++G  F  +   ++  +F     +  + + ++GG+ +L         
Sbjct: 162 KIIASIVAGVVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGVGTLI-------- 213

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              +       +  Y+ S L  +     R T ++ +   +V+L+    L+  
Sbjct: 214 -GAIAGAGIIESLKYYLSELATEYPIFERWTIILGLLYIIVLLVFPKGLVGT 264


>gi|17942385|gb|AAL50009.1| putative channel-forming polypeptide [Burkholderia cepacia]
          Length = 314

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 55/286 (19%), Positives = 113/286 (39%), Gaps = 14/286 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L ++    L   +   ++++++        +  +   G+ +++G  G+++L     Y IG
Sbjct: 8   LILIGLFTLAWLVLPMQAERHLVDGLNFAALLAIGGLGVGMLLGQCGIVNLGQAAFYGIG 67

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+     +  G      + +   +SG    ++GLP L+  G +LA+ATL +  I   + 
Sbjct: 68  AYATGYGTTVLGWHWLPSMLMGMALSGGVAALIGLPILRLSGFFLALATLAVGSIAGVLF 127

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            +W  +T G  G+    +L  +G  +    RF               Y +  +  L   +
Sbjct: 128 FEWDWLTGGTLGVGGIPKLGLMGFELSDPTRFH--------------YFIWPLVALLLWL 173

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              L  +    A R +RD   A   L+  +   K   F + +    +AG+ FA     +S
Sbjct: 174 ASNLVNSRQGLAMRAMRDAAPAAEVLSVDMHRIKTVMFVLCAMLGALAGSLFAHYVSFVS 233

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
              F    +I+ + + ++ G  S+  I      +  + E    +  
Sbjct: 234 VQSFTVERSILFLLVPVVAGARSVLGIVIGALFVALMPEALSTLGD 279


>gi|311103795|ref|YP_003976648.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310758484|gb|ADP13933.1| inner-membrane translocator 10 [Achromobacter xylosoxidans A8]
          Length = 306

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 96/308 (31%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL++V G + +++L     Y  GAY       R G     ++  
Sbjct: 10  LLNGLQFGLMLFLIAAGLTLVFGIMDIMNLAHGSLYMAGAYVAAETMQRTGSFTAAVLVA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +        ++      +          L + +    +L  +  I      + +      
Sbjct: 70  AVATGIVGVVLELTLIRR----------LALRDHLAQVLGTYAVILIANDLVKMIWGPAP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + + +         ++Y  +   +++     +A +  ++ RT      R    N++
Sbjct: 120 VMLNMPAALSGPVRLLPDLLYPAYRLMIIVFGVAAAAGLYWFVTRTRAGVLVRAGASNRQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L  F + +    +AGA                   I+V+  +++GG+
Sbjct: 180 MATLMGVRVPLLFLGVFVLGAMLAAVAGALLGPITSV--QVGMGEEILILVLVCIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335
            S+        ++  V              +     +           + + +  V++ R
Sbjct: 238 GSIRGAFVGALLVGMVDTAGRAFLPMLLRQVFSPAVASSVGPTLAAIAIYVLMAAVLVFR 297

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 298 PSGLFPAR 305


>gi|262373785|ref|ZP_06067063.1| urea ABC transporter, permease UrtC [Acinetobacter junii SH205]
 gi|262311538|gb|EEY92624.1| urea ABC transporter, permease UrtC [Acinetobacter junii SH205]
          Length = 356

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 50/345 (14%), Positives = 100/345 (28%), Gaps = 27/345 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
                 +L  +  L L     A     Y  ++  +I+   + A  L +V G  G+LSL  
Sbjct: 17  IAIFFAVLLSLPWLHLLSPDSAFYLSAYWITLIGKIMCLALVALALDLVWGYAGILSLGH 76

Query: 71  VIAYAIGAYSYVILGS----------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
            + +A+G Y++ +                   W  +P   + +      M L        
Sbjct: 77  GLYFALGGYAFGMYLMRESAGDGLPDFMRFLSWTELPWYWVGTEHFAWAMILVLFVPALV 136

Query: 121 YLAIATLIMS---EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                        +     +I            +  +  +              F  +  
Sbjct: 137 AFIFGFFAFRSKIKGVYFSIITQAMTFAAALLFFRNETGFGGNNGFTGFKTLLGFDITSA 196

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                + +V   +  L    +  L           IRD++     L    ++ KLSA+ +
Sbjct: 197 PMRASLCFVTALVLMLCFIGLRQLMNRPYGRVLGAIRDSENRLQYLGYRTLWYKLSAWVL 256

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           S+   G+AGA +      I+P       +I +   V  GG  +L        ++  V   
Sbjct: 257 SAVIAGIAGALYVPQVGIINPSEMNPVNSIEMAVWVAAGGRGTLIGPILGAGLINAVKTY 316

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         F  +       ++     +V +     ++ L
Sbjct: 317 --------------FTVAAPEAWLLILGALFIVVTIFLPKGVIGL 347


>gi|221633385|ref|YP_002522610.1| ABC transporter ATP-binding protein [Thermomicrobium roseum DSM
           5159]
 gi|221157057|gb|ACM06184.1| ABC transporter, ATP-binding protein [Thermomicrobium roseum DSM
           5159]
          Length = 590

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 54/309 (17%), Positives = 117/309 (37%), Gaps = 39/309 (12%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
              +  ++GI IL+Y   A    +  G    + L     + +GAY+  +      + +  
Sbjct: 25  GNDFHIALGISILMYATLAIAWGLFAGPTKYIGLATAAFFGVGAYTVGL--LYEKVPMLA 82

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
           L P++A+I+    +I+GL +L+ +G Y  I T  ++E+ + ++  ++    G  G+Y+  
Sbjct: 83  LYPLAAVIAALLALIVGLTTLRIQGMYFTIFTFGLAELIRQLMTWYQRNVTGSVGLYIIT 142

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
            +                          +Y+ L  +  L+      L R+    A   I 
Sbjct: 143 DITARQ----------------------IYWALTVLLGLTLLAGWLLARSRYGLALLMIG 180

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENIIVISIV 273
           +++ A           K+   A +SA + + GA  A     + P+  F  + + +   I 
Sbjct: 181 EDEVAARHSGVRTTAVKVLTLAGTSAIMAVTGAIVAPRWTYLDPNIAFNPTLSFMPAVIA 240

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGGM            L+ + +                +  F   +T ++ +    ++ 
Sbjct: 241 LLGGMQRFWGPLAGAIPLVILFDQL--------------NARFPTAYTLILGLLFMAIVF 286

Query: 334 MRSHSLLRL 342
           +  + +L L
Sbjct: 287 VIPNGILGL 295


>gi|187479304|ref|YP_787329.1| ABC transporter permease [Bordetella avium 197N]
 gi|115423891|emb|CAJ50443.1| ABC transporter, permease protein [Bordetella avium 197N]
          Length = 293

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 112/305 (36%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      +Y +FA G ++V G LG+++L     + +GAY+ + +  +  L +W  +  
Sbjct: 6   FVNALSLGSVYALFALGFTLVFGVLGVINLAHGAVFMVGAYAALTVVEQLSLPLWAALIA 65

Query: 99  SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           + +++G  GM++         + +   +  +I +     IL        G + +      
Sbjct: 66  AFLVAGLTGMLIDYLVLKPLRKRNAPHLIPMIATIGVGIILNNAAQGIFGASNLRFPH-- 123

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     +       + +   +    ++     L A ++  +RRT    A R I ++
Sbjct: 124 --------GTVPEEVIEIAGLHLTVIELGIIFLSFALMAVLMFVMRRTQFGRALRAIAES 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            KA + L   +    ++    ++A  G+AG       + + P M +   +  + +++ILG
Sbjct: 176 PKAAWLLGINVERLFITTSFAAAALGGIAGVLIGLYSNALFPLMGQPMLHKGI-AVIILG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM  +         L     L            + F               LFL++L+R 
Sbjct: 235 GMGDIRGAMLGGLFLGFAEVLSVAYVGSTMRDAVAFG-------------LLFLILLVRP 281

Query: 337 HSLLR 341
             L  
Sbjct: 282 QGLFG 286


>gi|33599746|ref|NP_887306.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella bronchiseptica RB50]
 gi|33567343|emb|CAE31256.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella bronchiseptica RB50]
          Length = 333

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 56/326 (17%), Positives = 113/326 (34%), Gaps = 26/326 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
              +   +++            I S  + I I  + ++GL +VV  LG +SL   + +A 
Sbjct: 9   AALLPLAVIVLYLPAWLGGSPAIYSAAVLIAILAVMSYGLDVVVSDLGEVSLGHTVFFAT 68

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY   +L +R G   W  +  + + +     ++GL +L+ R    ++ T  ++ +   +
Sbjct: 69  GAYVTALLSTRTGAGAWTTLAATIVAALGVSAVVGLVTLRLREFVFSLVTYAVAVVAVTV 128

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
              W  +                   + +L       S     +  ++    G+  +   
Sbjct: 129 AANWAFLGG-----------SDGLRGLPTLDLSVAGLSLTAGNDEELWPYAFGLLVVVIY 177

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +I   R + +  A   +  N +            +L  F  S+     AG  +A  R  +
Sbjct: 178 LIDRFRHSRLGTAAIMVHQNPRLATMSGIDPARVRLQVFLFSAPISAAAGWLYAYQRAYV 237

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           S D+ +    I++++ V+L G   L     ATA L+ + E       Y    +L      
Sbjct: 238 SADILETYFLILMLTAVVLVGRRQLLGPLLATA-LVLIQEKFFSFGGYVDKIVLGSLLVL 296

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
            +                    L+ L
Sbjct: 297 VLA--------------FFPQGLMGL 308


>gi|329917232|ref|ZP_08276456.1| putative high-affinity branched-chain amino acid transport protein
           (ABC superfamily, membrane) [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327544599|gb|EGF30079.1| putative high-affinity branched-chain amino acid transport protein
           (ABC superfamily, membrane) [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 307

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 96/307 (31%), Gaps = 8/307 (2%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +YI +  +  +IY M A G ++  G L ++  +      +GA++  +  S + +S+ +  
Sbjct: 4   QYIFNGLMLGVIYAMVAVGFTLFFGVLDVIKFSHGDTLMVGAFA-GLATSVWVISLGITS 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P   + +     +     L        I  L  +     +L      T  +  + +    
Sbjct: 63  PWVQLAAVVISAVCVTGLLGAAIARFLILPLHKAPPLNTLLATLMLGTVLREAVRLFYPD 122

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   +L+          I       +L       A +   + RT +  A R +  +
Sbjct: 123 GSNPKPFPALLPTDTLAFGSFILRADSVILLFSGLAAIAGVHFLITRTRLGMAIRAVAQD 182

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    +        L  FA+ S    +AG         I+ ++      +I  +  ILG
Sbjct: 183 GETARLMGINFEAVVLMTFALGSGLAALAGVMNGLYYSEINFNV-GLLLGVIGFAAAILG 241

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++        +   +                 F    +          + +++  + 
Sbjct: 242 GLGNIYGAIIGGFLFAALQVFGSAALPAL------FPNIASAYKDVFAFAVVIILMAWKP 295

Query: 337 HSLLRLR 343
             L+  +
Sbjct: 296 TGLIAEK 302


>gi|330810582|ref|YP_004355044.1| High-affinity branched-chain amino acid ABC transporter permease
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327378690|gb|AEA70040.1| putative High-affinity branched-chain amino acid ABC transporter,
           permease component [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 305

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 93/303 (30%), Gaps = 17/303 (5%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +      + ++ A GL+I+ G +G++++       IGAY+  +  S          P   
Sbjct: 17  NGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTIGAYTTYVCSSLTSHFTPWFQPYYF 76

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
            I+ A   ++             + + +       +L  W      +           + 
Sbjct: 77  FIAIALSFLVAGAIGWLVEWA--MISRLYKRPLDTLLATWGLSLVMQQTFRSVFGAREVS 134

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
            T    +      +  +       +++     L+ +I L L R+      R    N+   
Sbjct: 135 ATPPEWLMGSFNFTESIEIPRNGLFMMALTLLLTGAIFLLLYRSRWGLQVRATVQNRLMS 194

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++           FA+     G+AGA  A +    +         +    +V+ GG  S
Sbjct: 195 RAVGINTRKVDRMTFALGCGVAGVAGA--AFTTIGSTGPTAGSQYIVDTFLVVVFGGAQS 252

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L     +  ++     +           +L                 + L++++R   L 
Sbjct: 253 LFGTIASAFVIAQTQSISEFFLSGSMAKVLTLS-------------GVILILMLRPQGLF 299

Query: 341 RLR 343
            ++
Sbjct: 300 SIK 302


>gi|163844224|ref|YP_001621879.1| hypothetical protein BSUIS_B0028 [Brucella suis ATCC 23445]
 gi|163674947|gb|ABY39057.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 406

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 104/311 (33%), Gaps = 26/311 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                + + +  IQ+LI  +FA   S++ G  G+LS      + +G+++ V   + +G  
Sbjct: 20  PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHAMNAFGGE 79

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L  P+  +     G++ GL +  F      +   +++     +L    P   G  G  
Sbjct: 80  GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFG-- 137

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                          +YY+ L     S  ++  L  T       
Sbjct: 138 ---------GEAGVSSFRMPAWGFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R+N      L   +       FA+S+ F G+AGA  A + +  +  +F+   +  V+ 
Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
              +GG+ +    A   A +     +   +   +                    +   LV
Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLIFVLV 293

Query: 332 ILMRSHSLLRL 342
           ++     L+  
Sbjct: 294 MMFLPRGLVGE 304


>gi|148261914|ref|YP_001236041.1| inner-membrane translocator [Acidiphilium cryptum JF-5]
 gi|326405418|ref|YP_004285500.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|146403595|gb|ABQ32122.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Acidiphilium cryptum JF-5]
 gi|325052280|dbj|BAJ82618.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 311

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 112/274 (40%), Gaps = 13/274 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +Q++ + +FA G ++++G  GLLSL     + +G Y    +      S  + + +  +
Sbjct: 30  FVMQVMCFALFAMGANLLMGYTGLLSLGQAAFFGMGGYVAGYMIQTMHASTEVGLLLGGL 89

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            + A G++ G  +++ +  Y A+ TL ++++     ++    T G+ GI    R      
Sbjct: 90  TAAAIGVVFGWLAIRRQTIYFAMITLALAQLVYFFAVQDTGFTGGENGIQNIPR------ 143

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F S  +  +  +Y+++  +  L    +  +  +      + IR+N+    
Sbjct: 144 -------GALFGSIPLHADKQIYWLVFAVFILGFLFVHRVIHSPFGQVVKAIRENENRAI 196

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   K   F +++A  G+AG   A      +        + +V+ +V++GG+ ++
Sbjct: 197 SLGYKVEHYKWIIFVLAAALGGVAGGLNALVVRIATLTDVGNVTSGLVVLMVLVGGIGTV 256

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
                  AI++ +       + +          +
Sbjct: 257 FGPLVGAAIIVAMQYYLASFSDWVTVIQGTIFIA 290


>gi|296135401|ref|YP_003642643.1| inner-membrane translocator [Thiomonas intermedia K12]
 gi|295795523|gb|ADG30313.1| inner-membrane translocator [Thiomonas intermedia K12]
          Length = 293

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 96/299 (32%), Gaps = 23/299 (7%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           + +   GL+++ G + +++L       +GAY+  ++   +G +    +P     +   G 
Sbjct: 18  FSLIGIGLNLIFGVMRIINLAHGQFIVLGAYAAWLVSRHFGFNPLWGVPTVIGAAIVIGY 77

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
            +    +           L     F  +    + +T    G            +    + 
Sbjct: 78  PLYYAVVPRLQRSGDPEMLSFILFF-GVGQMLEALTGLGFGADQRSLPSEALGSGNLGVF 136

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
              FP S+       ++          ++ L+  RT +  A R I  +++   +    + 
Sbjct: 137 GQEFPDSW-------WWAAGVSIAAIVALWLYFTRTRLGYATRAIMASREEALATGINVN 189

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
                AF    A  G+AG F       +SPD    S      +IVI+G + +        
Sbjct: 190 KVSALAFVAGLALAGVAGVFLPYLLGSVSPD-LGDSLTTTSFAIVIIGSLGNPLGTIIGG 248

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
            +      L       + N               +  + L +++L+R   LL     S 
Sbjct: 249 LVFGLGTMLMQTYYSSWSN--------------LVPYVLLLVIVLIRPTGLLGKAVRSV 293


>gi|124268772|ref|YP_001022776.1| branched-chain amino acid ABC transporter permease [Methylibium
           petroleiphilum PM1]
 gi|124261547|gb|ABM96541.1| branched-chain amino acid ABC transporter, permease protein
           [Methylibium petroleiphilum PM1]
          Length = 304

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 90/301 (29%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++   GL+I+ G +G++++       IGAY+  +  +        L+P    +
Sbjct: 18  LSLFAVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTIFLGSTLTEKFAPTLVPYYFPV 77

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     +            L     +       +L  W      +           +  T
Sbjct: 78  AIVLAFVFAFIVGWGVEWGL--IRHLYKRPLDTLLATWGVSLGLQQVFRTFIGPKEVSPT 135

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P   +   I   +VL     ++  +++ L ++      R    N+    +
Sbjct: 136 LPDWLLGSWAPHEGLDIPINGLFVLGLTALVTTLVLIALYKSRWGLRVRATVSNRTMANA 195

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +    +      FA+     G+AGA  A +    +         +    +V  GG  SL 
Sbjct: 196 IGINTMKTDRLTFAIGCGIAGVAGA--AFTTIGSTGPTSGSLYIVDAFLVVTFGGAASLF 253

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     +           +L                 + L+++ R   L  +
Sbjct: 254 GTVVSAFGIAQTQSISEFFMTGSMAKVLTLS-------------LIVLILMFRPQGLFAV 300

Query: 343 R 343
           +
Sbjct: 301 K 301


>gi|331018978|gb|EGH99034.1| inner-membrane translocator [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 300

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 93/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+ A GL+IV G +G++++      A+G+Y+  +    +      L+    +I
Sbjct: 14  FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYATYVTSVVFQRYFPELMGWYFII 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 ++                 + +     +L  W      +           +   
Sbjct: 74  GIGVAFVVTFAFGFLLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 131

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               ++     S  +   +   +++     ++A++ ++L R+      R +  N+    +
Sbjct: 132 TVQWLQGAWKVSEGLELPLNRIFIIGLTFVIAAAVFVFLYRSRWGLRIRAVTQNRAMAGA 191

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     G+AG+ F       +  +      +    +V+ GG+ SL 
Sbjct: 192 AGINTARVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 249

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +         +        +               + + +++  R + L   
Sbjct: 250 GTFLSAFAIGQTQISLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 296

Query: 343 R 343
           +
Sbjct: 297 K 297


>gi|209551968|ref|YP_002283884.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209539561|gb|ACI59492.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 342

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 49/334 (14%), Positives = 113/334 (33%), Gaps = 17/334 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           ++  +L +  ++   ++F  +G   S + +     Q+L++V     L +  G  G++S  
Sbjct: 10  RWQPVLLICVLLTAFVVFSAVGNLLSTREV----TQVLMWVAIVTSLYVYTGVTGIVSFG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                +IGAY+  +L                  S    +   + +      Y     +I+
Sbjct: 66  HTAFASIGAYTAAVLTINPLFK----------TSTLVDLPEFILTRAIPTAYAIPVGVIV 115

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY--YVL 187
           +      +        G+A          +   V S        ++ ++    +   +  
Sbjct: 116 ATAVAVPIGLAIGRLRGEATTIGTFAFLLVIYAVFSNWDGVTGGTTALVGIPLVVGKWAA 175

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L        I    R ++        RD++ A  +    +   +L AF +S+A +   GA
Sbjct: 176 LAGSIAIVVIAYAFRISSTGRQLVAARDDEAAASACGVDVGKLRLRAFVLSAALMSFCGA 235

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             + S   +S D F      + ++++++GG  SLS        +   +     +      
Sbjct: 236 LSSGSIGVLSVDSFHVGATSMALAMLVVGGRNSLSGAVTGGLAVALAMIFLRHVEQGIDL 295

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              K       +   +    + L+++ R   L+ 
Sbjct: 296 GGTKLSLPGGSQELAVATF-MLLILVRRPLGLMG 328


>gi|163735016|ref|ZP_02142453.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
 gi|161391798|gb|EDQ16130.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
          Length = 379

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 49/364 (13%), Positives = 100/364 (27%), Gaps = 39/364 (10%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           MSI S RL     I+    +   + + L         +  ++  + L Y   A GL +  
Sbjct: 1   MSIASNRLFTRQDIVGFAILAGIIFIVL---PLALDGFRLNLFGKYLTYAFVAVGLVLCW 57

Query: 61  GSLGLLSLNCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGM 108
           G+ G+LSL   + + +G Y   +                       +             
Sbjct: 58  GAGGILSLGQGVFFGLGGYCMAMFLKLEASTPENTAIQSTPGIPDFMDWNQLSALPWWWE 117

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG----------KAGIYVADRLYF 158
                +                        +   +                I        
Sbjct: 118 PFANLAFALFAVVAVPVIFAFIIGMAMFRRRVGGVYFAIITQAFAAILTILIIGQQGFTG 177

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +  L     +       +  +YYV   + F+   I  ++R++ +      +RD + 
Sbjct: 178 GVNGITDLRTLQGWDIRTEAAKETLYYVNGVLLFICLFIAQFVRKSKLGRLLIAMRDQED 237

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   +   K+  F + +AF G+ GA F      +SP +     +I ++    +GG 
Sbjct: 238 RVRFSGYDVASFKIFIFCLGAAFAGIGGAMFTLQVGFMSPTLVGIVPSIEMVIFCAVGGR 297

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++                       SF       +      V+++  + 
Sbjct: 298 LSIIGAVYGALLVNWAKTSLSE--------------SFPELWLFGLGGLFIAVVMLFPNG 343

Query: 339 LLRL 342
           L  L
Sbjct: 344 LAGL 347


>gi|161620117|ref|YP_001594003.1| inner-membrane translocator [Brucella canis ATCC 23365]
 gi|260568629|ref|ZP_05839098.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40]
 gi|161336928|gb|ABX63232.1| inner-membrane translocator [Brucella canis ATCC 23365]
 gi|260155294|gb|EEW90375.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40]
          Length = 406

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 104/311 (33%), Gaps = 26/311 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                + + +  IQ+LI  +FA   S++ G  G+LS      + +G+++ V   + +G  
Sbjct: 20  PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHAMNAFGGE 79

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L  P+  +     G++ GL +  F      +   +++     +L    P   G  G  
Sbjct: 80  GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFG-- 137

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                          +YY+ L     S  ++  L  T       
Sbjct: 138 ---------GEAGVSSFRMPAWGFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R+N      L   +       FA+S+ F G+AGA  A + +  +  +F+   +  V+ 
Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
              +GG+ +    A   A +     +   +   +                    +   LV
Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLIFVLV 293

Query: 332 ILMRSHSLLRL 342
           ++     L+  
Sbjct: 294 MMFLPRGLVGE 304


>gi|256014821|ref|YP_003104830.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella microti CCM 4915]
 gi|255997481|gb|ACU49168.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella microti CCM 4915]
          Length = 406

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 104/311 (33%), Gaps = 26/311 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                + + +  IQ+LI  +FA   S++ G  G+LS      + +G+++ V   + +G  
Sbjct: 20  PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHAMNAFGGE 79

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L  P+  +     G++ GL +  F      +   +++     +L    P   G  G  
Sbjct: 80  GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFG-- 137

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                          +YY+ L     S  ++  L  T       
Sbjct: 138 ---------GEAGVSSFRMPAWGFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R+N      L   +       FA+S+ F G+AGA  A + +  +  +F+   +  V+ 
Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
              +GG+ +    A   A +     +   +   +                    +   LV
Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLIFVLV 293

Query: 332 ILMRSHSLLRL 342
           ++     L+  
Sbjct: 294 MMFLPRGLVGE 304


>gi|225418765|ref|ZP_03761954.1| hypothetical protein CLOSTASPAR_05989 [Clostridium asparagiforme
           DSM 15981]
 gi|225041711|gb|EEG51957.1| hypothetical protein CLOSTASPAR_05989 [Clostridium asparagiforme
           DSM 15981]
          Length = 351

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 105/310 (33%), Gaps = 24/310 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ ++  L + L          + ++  QI    + A G ++V+   G + L+     
Sbjct: 27  ILMIFLILCLGIQLLTPKFLKPANLINIMRQISNVGIMAVGEAMVIIIAG-IDLSVGATL 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           ++ A     L     ++ WL + V+ +   + GMI G  S+K        ATL    + +
Sbjct: 86  SLSACVAAYLAQ--MINPWLAVLVALLTGLSIGMINGFLSVKIGIAPFI-ATLGTQMMAR 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +                      +     +           + +++ +   +L M  + 
Sbjct: 143 GLAFMVT---------------AGIPIKFSNAASVLGGGRIALPWKLQLPVPILFMLAIY 187

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              I+ + +T        + DN+K+           K++A+ VS     +AG  +A +  
Sbjct: 188 IIGIVVMTQTVFGRNIYAVGDNEKSAKLSGINSDRIKITAYVVSGFLAAVAGILYAGNLT 247

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                     E  ++ ++VI      GG  S+  I    AI+  +      +NF      
Sbjct: 248 TAEASAGDGIETNVIAAVVIGGVSMAGGEGSVVGILIGAAIMGVIKNAFILLNFPATMQT 307

Query: 310 LKFDCSFNMR 319
                   + 
Sbjct: 308 FTIGLMIVLA 317


>gi|254510385|ref|ZP_05122452.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacteraceae bacterium KLH11]
 gi|221534096|gb|EEE37084.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacteraceae bacterium KLH11]
          Length = 336

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/334 (10%), Positives = 88/334 (26%), Gaps = 19/334 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           FL      S   +           + A G++++ G L   +       A GA   V++  
Sbjct: 3   FLNALVALSNFVLVPAIAYGSQLALGALGVTLIYGILRFSNFAHGDTMAFGAMIAVLVTW 62

Query: 87  RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
               +           L +P + +      +I      +F  +  A   +++      + 
Sbjct: 63  GLQAAGISFGPLPTALLALPFAILGCIVLVLITDRLVYRFYREQKAKPVILVIVSMGVMF 122

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I    +                        +        +  +      ++      A +
Sbjct: 123 IMNGLVRFIIGPDDQRFSDGARFIVSARDFKEMTGLREGLAIKTSQGITVIVAVVAVALL 182

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L +T    + R   DN+              +  + + +A    AG  +   +    
Sbjct: 183 FWFLNKTRTGKSMRAYSDNEDLALLSGINPERVVMITWVIVAALATTAGVLYGLDKSF-- 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309
                F   + + +  I+GG+ +         I+             +   +        
Sbjct: 241 KPFVYFQLLLPIFASAIVGGLGNPLGAIAGGFIIAFSEVTITYAWKKVLTYLAPEQLAPS 300

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                        +  + L +V+L +   L + +
Sbjct: 301 GLVQLLSTDYKFAVSFVILLIVLLFKPTGLFKGK 334


>gi|330974157|gb|EGH74223.1| inner-membrane translocator [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 300

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 93/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+ A GL+IV G +G++++      A+G+Y   +    +      L+    +I
Sbjct: 14  FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYMTYVTSVVFQRYFPELMGWYFII 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++                 + +     +L  W      +           +   
Sbjct: 74  AIGMAFVVTFAFGLLLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 131

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               ++     S  +   +   +++     ++A++ L+L R+      R +  N+    +
Sbjct: 132 TVQWLQGAWKISDGLELPLNRIFIIGLTFVIAAAVFLFLYRSRWGLRIRAVTQNRAMAGA 191

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     G+AG+ F       +  +      +    +V+ GG+ SL 
Sbjct: 192 AGINTARVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 249

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +         +        +               + + +++  R + L   
Sbjct: 250 GTFLSAFAIGQTQVSLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 296

Query: 343 R 343
           +
Sbjct: 297 K 297


>gi|260913308|ref|ZP_05919789.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Pasteurella dagmatis ATCC 43325]
 gi|260632539|gb|EEX50709.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Pasteurella dagmatis ATCC 43325]
          Length = 342

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 97/288 (33%), Gaps = 11/288 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               ++  +          +   + ++G+Q     +   G +IV+   G + L+     A
Sbjct: 15  LAGLILLVITFTFTNEYFFTLNNVLTIGLQTSTIALIGIGATIVI-LTGGIDLSTGSVVA 73

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   +  ++ +       L I    ++ G CG+  G+     R      ATL    + + 
Sbjct: 74  LSGVAAAMVVNAGVPVP-LGILFGILVGGLCGLANGMIVTVMRLPPFI-ATLGTMMVARG 131

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +    +TN      + +    LG      I         ++    + Y ++ M F++ 
Sbjct: 132 LAL---YVTNAAPVSGMPESFAELGNGALFRIVEEGANGLPIVKFPGIPYPVIIMIFIAI 188

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L +  +      I  N++A           K  A+  S    G+AG   A+    
Sbjct: 189 LFTFALSKLKVGRYIYAIGSNEEAARLSGIKTNQVKNYAYIASGLLSGLAGVILASRLVT 248

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
             P+     E   + S V+     +GG+ ++      + I+  +    
Sbjct: 249 AQPNGGVAYELDAIASAVVGGTSLMGGVGTIPGTLIGSFIIGVLRNGL 296


>gi|258624814|ref|ZP_05719742.1| D-ribose transport system permease protein [Vibrio mimicus VM603]
 gi|258582812|gb|EEW07633.1| D-ribose transport system permease protein [Vibrio mimicus VM603]
          Length = 333

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 96/312 (30%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 35  LIALLFLVVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   ++        + + L +P + +     G I G+   K +        + M+     
Sbjct: 94  LCG-AFAASLIAMEVPVLLAVPTALLAGAVLGAISGIIIAKGKVQAFIATLVTMT----- 147

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G   +Y   R    G T  +    +      +   + ++ +++       
Sbjct: 148 -------LLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYALGIPVPVWLMVVVFAGAWY 200

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +      T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 201 LL----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 256

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 257 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 316

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 317 AKAVVILLAVLV 328


>gi|222111253|ref|YP_002553517.1| inner-membrane translocator [Acidovorax ebreus TPSY]
 gi|221730697|gb|ACM33517.1| inner-membrane translocator [Acidovorax ebreus TPSY]
          Length = 353

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 45/330 (13%), Positives = 112/330 (33%), Gaps = 19/330 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +  +  +  +   +L F+   +T     +  + + ++I+ + A GL++V G + +L+   
Sbjct: 34  WTPLALVPLLAIAVLPFIGSASTWLTLTVAGLAMGMIIF-IIASGLTLVFGLMDVLNFGH 92

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI--ATLI 128
            +  A+GA+    +                +++    M + +      G          +
Sbjct: 93  GVFIALGAFVATSVLGAMSDWTGSAALWRNLVAVLPAMAVAMLVAGAVGLAFERLIVRPV 152

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
             +  + ILI    +  G+  I V      +   +   +R         + +  +  V +
Sbjct: 153 YGQHLKQILITMGGMIIGEELIKVIWGPQQIPLPLPEAMRGAWLVGEAAVEKYRVLAVGV 212

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
           G+    A +   L RT +    R    +++   SL   +    +  F   SA  G+ G  
Sbjct: 213 GLAV-FALLAWTLARTKLGLLIRAGVQDREIVESLGYGVRRLFVGVFVAGSALAGLGGVM 271

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +   +  + P M     N+++  ++I+GG+ S         ++  +      +       
Sbjct: 272 WGLYQQNVVPQM-GAQVNVLIFIVIIIGGLGSTGGALIGALLVGLMANYTGFLLPKVALF 330

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                           +  +  ++L R   
Sbjct: 331 SN--------------IALMVAILLWRPQG 346


>gi|197303960|ref|ZP_03168992.1| hypothetical protein RUMLAC_02697 [Ruminococcus lactaris ATCC
           29176]
 gi|197296928|gb|EDY31496.1| hypothetical protein RUMLAC_02697 [Ruminococcus lactaris ATCC
           29176]
          Length = 550

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/318 (9%), Positives = 79/318 (24%), Gaps = 9/318 (2%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y  I+ +   +  +   +      +   I ++  Q    +  A G++ ++   G   L+ 
Sbjct: 227 YIVIILIFIALCIITPIVKNTQLFTYTNILNILQQASPRMFLALGVAGLILLTG-TDLSV 285

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +G  +  I+      +    +                                ++
Sbjct: 286 GRMVGMGMVTATIIMHNGINTG--SVFGHIFDFSNMPAATRAILALLVCILFTTVFSCIA 343

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             F         I+     + +   + +    V         P+ F+        ++L  
Sbjct: 344 GFFMARFKMHPFISTMANMLIIFGLVTYATKGVSFGAIDAAIPNMFIPQIGSFPTIILWA 403

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 +     +T        +  N +A      ++    L AF ++    G       
Sbjct: 404 VVAIVVVWFIWNKTTFGKNLYAVGGNPEAAAVSGISVFKVTLGAFILAGILYGFGSWLEC 463

Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFY 304
                     +    ++  I+  ++      GG+  +S +     I   +      +   
Sbjct: 464 NRMVGSGSAAYGQGWDMDAIAACVVGGVSFTGGIGKISGVVTGVLIFTSLTYSLTILGID 523

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +          T 
Sbjct: 524 TNLQFIFEGIIILAAVTL 541


>gi|206559789|ref|YP_002230553.1| branched-chain amino acid transport system family protein
           [Burkholderia cenocepacia J2315]
 gi|198035830|emb|CAR51721.1| branched-chain amino acid transport system family protein
           [Burkholderia cenocepacia J2315]
          Length = 409

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 53/293 (18%), Positives = 100/293 (34%), Gaps = 12/293 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
                              +     Q    V+ A   ++ +G+ GLLS        +GA+
Sbjct: 12  WALFAACVALPAWLWPHGAVLGYLAQTAALVVLALSYNLQLGTTGLLSFGHAAFAGLGAF 71

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +     +  G  + LL  V  +     G + GL + +  G   A+ TL + E        
Sbjct: 72  AAAHWFNHVGGPLPLLPLVGGVAGAGFGFVAGLLATRRSGTAFAMITLGLGECVAAAAWS 131

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                 G  G+ +                   + + +       Y V+   C +SA  + 
Sbjct: 132 VPAWFGGLGGVPI------------DRASGASWGNGYFGAPAHAYAVIAAWCVVSACAMH 179

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L RT ++     +RDN     +L T     +L+    +S F G+AG       +  +PD
Sbjct: 180 ALTRTPLARLANAVRDNPARVAALGTDPRRVRLAMVTCASFFAGIAGTLTLIDVEIATPD 239

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
               + +  V+   ++GG  +    A   A+L  +  +  G++  +   L   
Sbjct: 240 SVSMARSATVLIAAVIGGTGAFFGPAVGVAVLTALSIVVAGVSRAWALYLGVL 292


>gi|146341679|ref|YP_001206727.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146194485|emb|CAL78510.1| putative ABC transporter, permease protein [Bradyrhizobium sp.
           ORS278]
          Length = 350

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 58/323 (17%), Positives = 117/323 (36%), Gaps = 28/323 (8%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
            L    +  ++  +    LI    A  L  + G  G++SL  +       Y   + G   
Sbjct: 30  ILPVIANGFFLIEIFGTTLILGTIALSLMFLAGYGGMVSLMQLTIAGFAGYMVAVFGVSG 89

Query: 89  G------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
                     WL  PV+ +++   G + G  +++  G Y  + TL +   F     +   
Sbjct: 90  NANISLGWPWWLATPVALVLAVLFGTLGGALAVRTEGIYTIMITLAIGAAFYYFTNQNWA 149

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           I NG  GI      +FLG   R+               +  YY++L +  L   ++++L 
Sbjct: 150 IFNGHTGINTIATPHFLGIDWRAD--------------VAFYYLILAVAALCYFVVVYLS 195

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R     A + +RDN +   +L   +   +++A+A ++   G+ G     +  +ISP    
Sbjct: 196 RAPFGLALQGVRDNPRRMAALGFNVNAHRIAAYAFAALIAGLGGVLQVWNYRQISPGSVA 255

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
               I ++ + ++GG+T          I + +                +F          
Sbjct: 256 VERCIDILIVAVVGGITRPVGPYIGAFIFVILRTFALDFLVKVGLDGNRFR--------L 307

Query: 323 LMVIALFLVILMRSHSLLRLRTP 345
           L+ +    ++   S  ++ L   
Sbjct: 308 LIGLGFLAIVFWSSDGVIGLYER 330


>gi|332652798|ref|ZP_08418543.1| galactoside ABC transporter, permease protein MglC [Ruminococcaceae
           bacterium D16]
 gi|332517944|gb|EGJ47547.1| galactoside ABC transporter, permease protein MglC [Ruminococcaceae
           bacterium D16]
          Length = 550

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/325 (9%), Positives = 86/325 (26%), Gaps = 9/325 (2%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F L+   Y  I+ +   +  +   +      +   + ++  Q    +  A G++ ++   
Sbjct: 220 FFLKNGLYLAIIVIFIALCIITPIVKNTQLLTMNNVLNILQQASPRMFLALGVAGLILLA 279

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G   L+      +G  +  I+  +   +    +           ++  +         L 
Sbjct: 280 G-TDLSIGRMVGMGMTAATIIMHQGINTG--SVFGHIFDFTGLPVVARILLALVVCIVLC 336

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
                ++  F         I+     + +   + +    V         PS  +      
Sbjct: 337 TIFTTIAGFFTAKFKMHPFISTMANMLVIFGLVTYSTKGVSFGAIDPSIPSMIIPRIGKF 396

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
             ++L        +     +T        +  N +A      ++    + AF ++    G
Sbjct: 397 PTIILWAVAAIIIVWFIWNKTTFGKNLYAVGGNPEAASVSGISVFLVTVGAFVMAGILYG 456

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVEL 297
                            +     +  I+  ++      GG+  +S +     I   +   
Sbjct: 457 FGSWLECIRMVGSGSAAYGQGWEMDAIAACVVGGISFTGGIGKISGVVVGVFIFTALTYS 516

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTT 322
              +        +       +  T 
Sbjct: 517 LTILGIDTNLQFVFSGIIILVAVTL 541


>gi|301059504|ref|ZP_07200417.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
 gi|300446399|gb|EFK10251.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
          Length = 333

 Score = 73.0 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 55/333 (16%), Positives = 112/333 (33%), Gaps = 38/333 (11%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L  Y ++L LL      ++ L         Y   + I   +Y + A    +++   GLLS
Sbjct: 22  LTSYREMLYLLIPGAIPVVGLLCFTPILSDYWREVMISTAVYALLAMSWDMLM-CAGLLS 80

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L   + + IG+Y    L    GL   L +P++ +  G    ++ LP L+ RG Y A+ TL
Sbjct: 81  LGQSLFFGIGSYLAGSLNYYAGLPPILTMPIATIGGGVLCTVLLLPVLRLRGVYFAMVTL 140

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           ++  +    L++   I  G  G+                             ++   +V+
Sbjct: 141 VLPLMLSR-LVEATRILGGTEGLTGLTPFPN---------------------QLTALFVI 178

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                        +  +      + I DN ++  S    I + K     + +     AGA
Sbjct: 179 QLALLAVLFGFRRIMGSDYGLVIKGISDNDRSVMSAGLNIYWYKTQVLFLGACVGCFAGA 238

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
           F            F    +++ ++  ++GG  + +       IL+ + E+   +      
Sbjct: 239 FGTHMDMFAGMPGFALDYSLMPVASAVVGGTGTFAGPLIGAFILVPLSEMLRAL------ 292

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                             + L + ++     + 
Sbjct: 293 ---------GALRIVFYGLFLVIFVVGLPEGIF 316


>gi|330978920|gb|EGH77979.1| high-affinity branched-chain amino acid ABC transporter permease
           BraE [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 152

 Score = 72.6 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 15/147 (10%)

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I   L R  I  AW  +R+++ A  S+    +  KLSAF + ++  G+AG FFA+ + 
Sbjct: 1   MFIKHRLTRMPIGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQG 60

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++P  F F E+ ++++IV+LGGM S   +  A  +L    EL    + Y          
Sbjct: 61  FVNPTSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEY---------- 110

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                   L  I + L+++ R   L+R
Sbjct: 111 -----RVLLFGILMVLMMIWRPRGLIR 132


>gi|256112071|ref|ZP_05453007.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether]
 gi|265993513|ref|ZP_06106070.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether]
 gi|262764383|gb|EEZ10415.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether]
          Length = 360

 Score = 72.6 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 105/311 (33%), Gaps = 26/311 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                + + +  IQ+LI  +FA   S++ G  G+LS      + +G+++ V + + +G  
Sbjct: 20  PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHVMNAFGGE 79

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L  P+  +     G++ GL +  F      +   +++     +L    P   G  G  
Sbjct: 80  GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFG-- 137

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                          +YY+ L     S  ++  L  T       
Sbjct: 138 ---------GEAGVSSFRMPAWGFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R+N      L   +       FA+S+ F G+AGA    + +  +  +F+   +  V+ 
Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQVINIEAANYVVFEAGISTAVVL 248

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
              +GG+ +    A   A +     +   +   +                    + L LV
Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLILVLV 293

Query: 332 ILMRSHSLLRL 342
           ++     L+  
Sbjct: 294 MMFLPRGLVGE 304


>gi|197121847|ref|YP_002133798.1| inner-membrane translocator [Anaeromyxobacter sp. K]
 gi|196171696|gb|ACG72669.1| inner-membrane translocator [Anaeromyxobacter sp. K]
          Length = 288

 Score = 72.6 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 91/289 (31%), Gaps = 13/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +   +Y +   GL+++ G + + +        +G Y   +  +   +  +L I +
Sbjct: 8   VLSGLLVGGVYALIGIGLTLIFGVMRVTNFAHGELLMLGMYLAWLAFTGLHIDPFLSIVL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A      G  +    +      L    ++++     I+     +               
Sbjct: 68  VAPAMFLWGAFLQKSFVNRVLGALPQNQILLTIGLGLIMSNTVMLI-----------FTS 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +      +  + +     + Y  L    ++ ++  +L +T    A R    ++ 
Sbjct: 117 DYRILTTTYSSSSYKLAGLSISQPLLYAFLITVAITGALYWFLLKTDTGQAIRATAQDRD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    + AF + SA  G AGA  + +           +  +    IV+LGGM
Sbjct: 177 AAQLMGINVRRMSVLAFGIGSALAGTAGALISPTYYI--FPQVGSAFTLKAFVIVVLGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            S+        I+     L           L+ F     +       + 
Sbjct: 235 GSVVGATLGGIIIGVAESLSAVYIASGLKELVTFVLFLALLLFKPAGLL 283


>gi|239940460|ref|ZP_04692397.1| branched chain amino acid transport permease [Streptomyces
           roseosporus NRRL 15998]
 gi|239986943|ref|ZP_04707607.1| branched chain amino acid transport permease [Streptomyces
           roseosporus NRRL 11379]
 gi|291443891|ref|ZP_06583281.1| branched chain amino acid transport permease [Streptomyces
           roseosporus NRRL 15998]
 gi|291346838|gb|EFE73742.1| branched chain amino acid transport permease [Streptomyces
           roseosporus NRRL 15998]
          Length = 309

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 92/305 (30%), Gaps = 8/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A G ++V G + L++      +  G +  + +         +L+ +
Sbjct: 8   LVNGLLLGSMYGLVAIGYTMVYGIVQLINFAHGEIFMTGGFGALTVWLILPSGTNVLLAL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             MI GA  +   +     R  Y  +            LI    ++        A     
Sbjct: 68  PLMIIGAIIVATTIAVGAERFAYRPLRG----GPRLAPLITAIGLSLALQQAVWAWYPGA 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    F    V  +    ++L+      A +  ++ +T      +    +  
Sbjct: 124 KSARTFPEIPGGPFELGPVTIQTGDVFLLIAAPLSMAFLGYFVMKTRTGRGMQATAQDPD 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        + AFA+ +AF  +    +      +   M  F   +   +  +LGG+
Sbjct: 184 TAKLMGINTDRIIVVAFALGAAFAAIGAVAYGLKYGEVQFRM-GFLLGLKAFTAAVLGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++         L     +                 S+      +++I + L    R   
Sbjct: 243 GNIYGAMIGGLTLGVAETMAAAYISEVPGLEQLGGQSWANAWAFVLLILVLLF---RPQG 299

Query: 339 LLRLR 343
           +L  R
Sbjct: 300 ILGER 304


>gi|229522799|ref|ZP_04412213.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           TM 11079-80]
 gi|229526243|ref|ZP_04415647.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           bv. albensis VL426]
 gi|229527889|ref|ZP_04417280.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           12129(1)]
 gi|254225889|ref|ZP_04919492.1| ribose ABC transporter, permease protein [Vibrio cholerae V51]
 gi|125621616|gb|EAZ49947.1| ribose ABC transporter, permease protein [Vibrio cholerae V51]
 gi|229334251|gb|EEN99736.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           12129(1)]
 gi|229336401|gb|EEO01419.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           bv. albensis VL426]
 gi|229340016|gb|EEO05024.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           TM 11079-80]
          Length = 333

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 35  LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +     +  +       +    +   + +                + F  
Sbjct: 94  LCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 142 TLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYALGIPVPVWLMVVVFAGAWYL 201

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 202 L-----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 256

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 257 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 316

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 317 AKAVVILLAVLV 328


>gi|86748378|ref|YP_484874.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86571406|gb|ABD05963.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 308

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 94/301 (31%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   +YV+ A GL+I+ G +G++++       +GAY   +  S +   +  L P    +
Sbjct: 22  LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTWMTSSAFQAYLPSLFPGYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     I            L     +       +L  W      +           +G  
Sbjct: 82  AMILAFIAAGALGMLVEWGL--IRHLYKRPLDTLLATWGLSLILQQAYRSIFGAREVGVE 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +   +  +  +   I   +V+     ++A++   + ++      R +  N+    +
Sbjct: 140 LPQWMLGSKQITDTIEVPINGIFVMCLTFLITAAVAYVMYKSRWGRQVRAVVQNRVMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           F +     G+AG+ F       +         +    +V+ GG  SL 
Sbjct: 200 VGINTEKVDRYTFGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLVVVFGGAASLF 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++A+  ++++R   L  L
Sbjct: 258 GTIASAFSISQAQSTMEFFMSGSMAK-------------VLTLLAIVAILMVRPQGLFAL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|293603213|ref|ZP_06685646.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292818444|gb|EFF77492.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 306

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 97/308 (31%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL++V G + +++L     Y  GAY       R G     ++  
Sbjct: 10  LLNGLQFGLMLFLIAAGLTLVFGIMDIMNLAHGSLYMAGAYVAAETMQRTGSFTAAVLVA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +        ++      K          L + +    +L  +  I      + +      
Sbjct: 70  AVATGLVGVVLELTLIRK----------LALRDHLAQVLGTYAVILIANDLVKMIWGPAP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + +++         ++Y  +   +++     +A +  ++ RT      R    N++
Sbjct: 120 VMLNMPAVLSGPVRLMPDLLYPAYRLMIIVFGVAAAAGLYWFVTRTRAGVLVRAGASNRQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L  F + +    +AGA                   I+V+  +++GG+
Sbjct: 180 MATLMGVRVPLLFLGVFVLGAMLAAVAGALLGPITSV--QVGMGEEILILVLVCIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335
            S+        ++  V              +     +           + + +  V++ R
Sbjct: 238 GSIRGAFVGALLVGMVDTAGRAFLPMLLRQVFSPAVASSVGPTLAAIAIYVLMAAVLVFR 297

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 298 PSGLFPAR 305


>gi|319956564|ref|YP_004167827.1| amino acid/amide ABC transporter membrane protein 1, haat family
           [Nitratifractor salsuginis DSM 16511]
 gi|319418968|gb|ADV46078.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Nitratifractor salsuginis DSM 16511]
          Length = 297

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 85/269 (31%), Gaps = 12/269 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++        +GA+         G    + + V
Sbjct: 10  LVNGASLGSMYALIAIGYTMVYGVLRLINFAHGDIMMVGAFLTY-FAYNAGAPFSVAVLV 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +   G++    + K   D   I+ LI +      L     +  G          Y 
Sbjct: 69  GILGAVIVGVLTDKIAYKPLRDAPKISLLITAIGISFFLENLFNVLFGGVPRAFKAPEYL 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        F    +   I +  +      +  +++  L RT    A R +  +  
Sbjct: 129 TKV----------FHWGSIYLPISVIIIPTVTVAILVAVLWVLYRTKYGMAIRALAFDIP 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           FA+ SA   + G F+A S   I P M      +   +  +LGG+
Sbjct: 179 TVKLMGVNADSIISIVFALGSALAAIGGVFYAISYPSIDPLM-GVMVGLKAFAAAVLGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFN 307
            S++       IL     +   +      
Sbjct: 238 GSVTGAVLGGFILGFTEIMVVAIFPELGG 266


>gi|302186598|ref|ZP_07263271.1| inner-membrane translocator [Pseudomonas syringae pv. syringae 642]
          Length = 300

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 92/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+ A GL+IV G +G++++      A+G+Y   +    +      L+    +I
Sbjct: 14  FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYMTYVTSVVFQRYFPELMGWYFII 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 ++                 + +     +L  W      +           +   
Sbjct: 74  GIGMAFVVTFAFGLLLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 131

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               ++     S  +   +   +++     ++A++ L+L R+      R +  N+    +
Sbjct: 132 TVQWLQGAWKISDGLELPLNRIFIIGLTFVIAAAVFLFLYRSRWGLRIRAVTQNRAMAGA 191

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     G+AG+ F       +  +      +    +V+ GG+ SL 
Sbjct: 192 AGINTARVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 249

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +         +        +               + + +++  R + L   
Sbjct: 250 GTFLSAFAIGQTQVSLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 296

Query: 343 R 343
           +
Sbjct: 297 K 297


>gi|270262012|ref|ZP_06190284.1| inner-membrane translocator [Serratia odorifera 4Rx13]
 gi|270043888|gb|EFA16980.1| inner-membrane translocator [Serratia odorifera 4Rx13]
          Length = 316

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 48/317 (15%), Positives = 99/317 (31%), Gaps = 19/317 (5%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS---------YVILGSRYGL 90
            +  +   IY + A G ++V G L +++        +GA S         +         
Sbjct: 9   VNGLMLGSIYALIALGYTMVYGILRIINFAHGDVLMVGALSALSAIGVLQHHFPTLSPYT 68

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + L   ++  +     M +   + +   +   +A LI       +L     +   +  +
Sbjct: 69  VLLLATTIAMAVCALVSMSIERLAYRRLRNAPRLAPLISGIGVSLLLQTLAMLIWSRNPL 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                L      +                   +   +L M    A ++L +  +    A 
Sbjct: 129 MFPQLLPMSPIALTQGSAGHAPAVITGTGIATLVVAVLVM----AGLLLLVEHSRFGRAM 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   +N +    +        L  FA+  A   +AG   A++       M  F   I   
Sbjct: 185 RATAENPQVAGLMGIDPNRVILLTFALGGALAAVAGVMMASNYGNAGFSM-GFLPGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ +L       A+L G++          +   L      +        + L  
Sbjct: 244 TAAVLGGIGNLR-----GAMLGGLLLGLFESLGTGYLGELTGGTFGSNYQDVFAFLILIA 298

Query: 331 VILMRSHSLLRLRTPSN 347
           V+++R   LL  R  + 
Sbjct: 299 VLVLRPSGLLGERVATR 315


>gi|220921739|ref|YP_002497040.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219946345|gb|ACL56737.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 306

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 98/313 (31%), Gaps = 29/313 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89
           + +      IY + A G ++V G +G+++      + + A+         + V+      
Sbjct: 8   LINGLTLGSIYGLIAIGYTMVFGIIGMINFAHGDVFMLSAFIALIVFLILTTVLGIGSVV 67

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L++ L++ V+  ++   G  +   + +       +A LI +      L  +  +  G   
Sbjct: 68  LALILVMIVAMALTALWGWSIERIAYRPLRGSFRLAPLISAIGVSIFLSNFVQVVQGARN 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                 +  +                 V        ++L    +       ++ T++  A
Sbjct: 128 KPTPPMMRDVIVLWTGE------NGYAVALSYKQIIIMLVTGVMLLGFWYLVQHTSLGRA 181

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +A   +AG  +      +S     F   +  
Sbjct: 182 QRACEQDRKMAALLGIDVDRTISLTFVLGAALAAVAGTMYLLYYGVVSF-SDGFVPGVKA 240

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        I+  +           +  +  F               L 
Sbjct: 241 FTAAVLGGIGSLPGAVLGGLIIGLIETFWSAYFSIEYKDVAAFS-------------ILA 287

Query: 330 LVILMRSHSLLRL 342
           +V++     +L  
Sbjct: 288 IVLIFMPSGILGR 300


>gi|163795202|ref|ZP_02189170.1| branched-chain amino acid ABC transporter, permease protein [alpha
           proteobacterium BAL199]
 gi|159179600|gb|EDP64129.1| branched-chain amino acid ABC transporter, permease protein [alpha
           proteobacterium BAL199]
          Length = 282

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 72/306 (23%), Positives = 131/306 (42%), Gaps = 37/306 (12%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  S+   I I V FA  L++V G  G +SL        GAY   +          + +
Sbjct: 4   AYEISLLTTIGIAVTFALSLNLVTGFCGQISLGHAAFLGTGAYVAAMSVVAGAP-FAVGL 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +++ A G ++GL SL+ R D+LAI T+ +  +F     + +    G+ GI      
Sbjct: 63  IAGGLVAAAVGAVVGLASLRVRHDFLAITTMGVGFLFVG-FTRQQDWLGGEMGIAGIPEA 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
            F                      + +  V LG+   +A+  ++L+RT +  A+  I  +
Sbjct: 122 PFGK--------------------VGLMVVALGVAAATAAFSVYLKRTWMGFAFDAIAAD 161

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +    ++   +   KL+AFA+ +   G+AG  +A +   I+PD F F E++ V+++V++G
Sbjct: 162 EDTARTVAIDVSRYKLAAFALGTGIAGLAGGLYAFNIRFIAPDSFGFVESVTVLAMVVIG 221

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+  +  A A L  + +    ++ Y                  L  + LF V+ +  
Sbjct: 222 GIGSVLWVTVAAAALAVLPQWFQAVDDY---------------KLLLYGVLLFTVMRLSP 266

Query: 337 HSLLRL 342
             L  L
Sbjct: 267 GGLAGL 272


>gi|90419447|ref|ZP_01227357.1| putative ABC transporter permease protein [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90336384|gb|EAS50125.1| putative ABC transporter permease protein [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 308

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 95/307 (30%), Gaps = 15/307 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     ++  + A GL+++ G + L++L   + Y +GAY    L +  G     L    
Sbjct: 10  LNGLQFGILLFLVAAGLTLIFGIMDLINLAHGVLYMVGAYLVATLTAYTGDFFLGLALTI 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                   ++  L   +          L    +   +    + +            +   
Sbjct: 70  PATLLFGIILEVLIFRRLYDRDHLDQVLATFGLILILNEGVQMLWGAAPMSVPIPDVLSG 129

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +             + Y +F   ++      +  + + +  T I    R    N   
Sbjct: 130 SMPL----------IGNMRYPLFRVLIIAAGLATALGLYILVSHTRIGMRLRAGATNAPM 179

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   I    +  FA+ +   G AGA  A             S  I+   ++++GG+ 
Sbjct: 180 ISALGVDIRRLFMLVFALGAMLAGFAGAMVAPILSV--QPGMGDSILILTFVVIVIGGVG 237

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMRS 336
           S+     A  ++  V  L          +L+    +     T    L+ I +  V+  R 
Sbjct: 238 SVRGAFVAALLVGLVDTLGRTFGPILLRNLMDPSAASQTGRTLAPMLIYILMAAVLFFRP 297

Query: 337 HSLLRLR 343
             L   +
Sbjct: 298 AGLFPAK 304


>gi|301383904|ref|ZP_07232322.1| inner-membrane translocator [Pseudomonas syringae pv. tomato Max13]
 gi|302063607|ref|ZP_07255148.1| inner-membrane translocator [Pseudomonas syringae pv. tomato K40]
 gi|302131016|ref|ZP_07257006.1| inner-membrane translocator [Pseudomonas syringae pv. tomato NCPPB
           1108]
          Length = 300

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 93/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+ A GL+IV G +G++++      A+G+Y+  +    +      L+    +I
Sbjct: 14  FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYATYVTSVVFQRYFPELMGWYFII 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 ++                 + +     +L  W      +           +   
Sbjct: 74  GIGVAFLVTFAFGFLLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 131

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               ++     S  +   +   +++     ++A++ ++L R+      R +  N+    +
Sbjct: 132 TVQWLQGAWKVSEGLELPLNRIFIIGLTFVIAAAVFVFLYRSRWGLRIRAVTQNRAMAGA 191

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     G+AG+ F       +  +      +    +V+ GG+ SL 
Sbjct: 192 AGINTARVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 249

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +         +        +               + + +++  R + L   
Sbjct: 250 GTFLSAFAIGQTQISLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 296

Query: 343 R 343
           +
Sbjct: 297 K 297


>gi|283850452|ref|ZP_06367740.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
 gi|283574023|gb|EFC21995.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
          Length = 294

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 95/302 (31%), Gaps = 21/302 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   +Y + A GL+++ G + +++        +G +S   L    G+  +L + +   +
Sbjct: 12  IMMGAMYGLTALGLTLIFGVMKVVNFAHGSLLMVGMFSAYWLIKLTGIHPYLALVIVPPV 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G  +    +K            ++      +I                       T
Sbjct: 72  LFVFGYYLQDVVIKPVFKAERQVREPLT------VIIVTTGVWYVLDNLALMLFGAEYRT 125

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           VR+ I    F     I  +  +   +     +  + L++R+T I  A R    +++A   
Sbjct: 126 VRTAISNKSFALGQYIISVPKFSGFVVAVLTAVGLALFMRKTKIGMALRATSLDREAANL 185

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +          AF + +A  G+AG              F    +I    IV+LGG+ S+ 
Sbjct: 186 MGIDQYKVYNIAFGLGTAIAGIAGCVLIPFYYV--YPSFGVVFDIRAFIIVVLGGLGSIP 243

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  ++  +  +        +                ++     +++ ++       
Sbjct: 244 GALLGGLVIGVIESVFSQFMASTWTEA-------------IIYAIFLVILFVKPSGFFGH 290

Query: 343 RT 344
           + 
Sbjct: 291 KQ 292


>gi|254503131|ref|ZP_05115282.1| amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222439202|gb|EEE45881.1| amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 400

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 38/325 (11%), Positives = 92/325 (28%), Gaps = 19/325 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L  +    +   +      +   S+   I I ++FA   ++++G  GLLS    + + +
Sbjct: 1   MLPFLIMAAVLAVIPLAGPSRTTYSLLNAIGINMVFALSYNMLLGRAGLLSFGHAVYFGL 60

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G Y+ +           L            G   G  +    G        I   +    
Sbjct: 61  GGYAAMHAMQAIEAGTGLWSMFPVFALPLVGFAGGAFAGAVIGWPSCRRAGIPFAMISLG 120

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           + +        AG                 +         +     +Y+ +     +   
Sbjct: 121 IAELV----AAAGFMFTSLFGGEEGVSGDRMNGPEVFGLSLGPINEVYWFIAAWTLIGTI 176

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +    RT +      +RDN +    +       +   F  +  F G+AG   A + +  
Sbjct: 177 AMFAFTRTPLGKMGEAVRDNPERVEFVGYDPQRVRYLIFIFAGGFAGLAGGMAAVNYEIF 236

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +P+      +  V+ +  +GG+   +       +L  +          +           
Sbjct: 237 TPETLSVIPSGFVLLMAYVGGIRYFAGPMLGAVLLTYMQSNLSDFTEAW----------- 285

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                  + +   ++++     L  
Sbjct: 286 ----LLYLGLLFMMIVMFAPSGLAG 306


>gi|148257253|ref|YP_001241838.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. BTAi1]
 gi|146409426|gb|ABQ37932.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 323

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 58/327 (17%), Positives = 120/327 (36%), Gaps = 29/327 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  +   +     +        + ++ I ++I  + A G +I+ G  GL S      +  
Sbjct: 6   LATLAIIVAALAVIAFAGLSGALLNLMIFMMIIALAAQGWNILGGYAGLSSFGHAAFFGA 65

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQ 134
           GAY+  +L +R+G++ W+ + +   +    G  +G  S +   +G Y A+ TL  +E+ +
Sbjct: 66  GAYAMAVLQTRFGVNAWIALVIGIALGALVGAFIGFLSFRSGLKGSYFALITLAFAEVAR 125

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +   W         +                      P        +   + +G   + 
Sbjct: 126 ILANSWNFTGGAAGILLKLQ---------------TGLPYLQFADRRYFLLITIGCVAIG 170

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +  WL  +        +R+N++A  +L   +   K+ A A+S A    AG  +A +  
Sbjct: 171 LVVSWWLEHSRFGAYLVALRENEQAAQALGVDVFAVKMKAIAISGALTAAAGCLYAQNYL 230

Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
            I  +  F    +I  +   I+GG  ++        +L+G+ EL  G++           
Sbjct: 231 FIDANVAFGSWISIEALFAAIVGGSGTVLGPLIGAIVLLGLGELTKGLSG---------- 280

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLL 340
                    +  I L L +    + L+
Sbjct: 281 -GIPGMDLLVFGIILVLSVAFSPNGLV 306


>gi|220916639|ref|YP_002491943.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219954493|gb|ACL64877.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 288

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 91/289 (31%), Gaps = 13/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +   +Y +   GL+++ G + + +        +G Y   +  +   L  +L I +
Sbjct: 8   VLSGLLVGGVYALIGIGLTLIFGVMRVTNFAHGELLMLGMYLAWLAFTGLHLDPFLSIVL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A      G  +    +      L    ++++     I+     +               
Sbjct: 68  VAPAMFLWGAFLQKSFVNRVLGALPQNQILLTIGLGLIMSNTVMLI-----------FTS 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +      +  + +     + Y  L    ++ ++  +L +T    A R    ++ 
Sbjct: 117 DYRILTTTYSSSSYKLAGLSISQPLLYAFLITVAITGALYWFLLKTDTGQAIRATAQDRD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    + AF + SA  G AGA  + +           +  +    IV+LGGM
Sbjct: 177 AAQLMGINVRRMSVLAFGIGSALAGTAGALISPTYYI--FPQVGSAFTLKAFVIVVLGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            S+        I+     L           L+ F     +       + 
Sbjct: 235 GSVVGATLGGIIIGVAESLSAVYIASGLKELVTFVLFLALLLFKPAGLL 283


>gi|317484131|ref|ZP_07943061.1| branched-chain amino acid transport system/permease component
           [Bilophila wadsworthia 3_1_6]
 gi|316924635|gb|EFV45791.1| branched-chain amino acid transport system/permease component
           [Bilophila wadsworthia 3_1_6]
          Length = 301

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 97/305 (31%), Gaps = 16/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L L++      + +G+Y    L   + L +   +  
Sbjct: 8   LTNGLAVGGIYALIALGYTMVYGVLRLINFAHGDLFTLGSYLG--LTLLFSLGLQGKMSG 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +      M MGL ++            +        ++     +   +   +      
Sbjct: 66  ILVGGALIVMSMGLVAVVGYLLERVAYRPLRGSNRLAAVVSALGASIFFSNAIMLVYGAR 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  ++         V   +    + +G   L   +  ++  T I  A R +  +Q 
Sbjct: 126 SQVYPNGILPSVAVSLLGVDIPLMRIVMFVGTVVLMLLLYWFINHTRIGTAIRAVAIDQD 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F +  A  G AG        +I+ DM  FS  +   +  I+GG+
Sbjct: 186 TAKLMGINVDNIISMIFLIGPALGGAAGVMMGLYYGQITYDM-GFSFGLKAFTAAIMGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L  +  +        +   + F             + L L+++ R   
Sbjct: 245 GNIPGAMVGGILLGVLEAMGAAYVSIAWKDAIAF-------------LVLILILIFRPTG 291

Query: 339 LLRLR 343
           LL  R
Sbjct: 292 LLGER 296


>gi|28869612|ref|NP_792231.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|28852854|gb|AAO55926.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 293

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 93/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+ A GL+IV G +G++++      A+G+Y+  +    +      L+    +I
Sbjct: 7   FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYATYVTSVVFQRYFPELMGWYFII 66

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 ++                 + +     +L  W      +           +   
Sbjct: 67  GIGVAFVVTFAFGFLLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 124

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               ++     S  +   +   +++     ++A++ ++L R+      R +  N+    +
Sbjct: 125 TVQWLQGAWKVSEGLELPLNRIFIIGLTFVIAAAVFVFLYRSRWGLRIRAVTQNRAMAGA 184

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     G+AG+ F       +  +      +    +V+ GG+ SL 
Sbjct: 185 AGINTARVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 242

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +         +        +               + + +++  R + L   
Sbjct: 243 GTFLSAFAIGQTQISLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 289

Query: 343 R 343
           +
Sbjct: 290 K 290


>gi|258654040|ref|YP_003203196.1| inner-membrane translocator [Nakamurella multipartita DSM 44233]
 gi|258557265|gb|ACV80207.1| inner-membrane translocator [Nakamurella multipartita DSM 44233]
          Length = 373

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 56/342 (16%), Positives = 117/342 (34%), Gaps = 21/342 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFL--------FLGATKSQKYIDSMGIQILIYVMFAWGLSIV 59
             ++  ++  +AV+  L+            L    +      +    L+    A    ++
Sbjct: 26  WRRWLPVVIPVAVLALLIFLPWMRFSVPGVLPGVVNSPGSMQLLALCLVTAGIALSYDVM 85

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
            G  GLLS    +    GAY   I    +G S+ L + +    + A  +++G  +L+ +G
Sbjct: 86  FGRTGLLSFGHALFVGTGAYLAAIALGTWGASLGLAVLIVLAGAIALPLVVGAIALRVKG 145

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
              A+ TL  ++       +      G       +R                   S V+ 
Sbjct: 146 IAFAMVTLAFAQAVAITAARNPGGLTGGEEGLSLNRSALPAF------------LSGVVN 193

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
             + Y++ LG   L   ++LWL      +AW  +R+N+     L  +    KL+A  V+ 
Sbjct: 194 APYRYWLALGFLVLCVLVVLWLTTARTGHAWAAVRENEDRVEVLGMSAYRTKLTAVVVAG 253

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
               + G          +P +      + ++ +V+LGG  S         + + +     
Sbjct: 254 FLGTLGGFVQLIIVGGANPHLLSTELTLSLLIMVVLGGAGSRWGAVIGGVVYVLLDNRLQ 313

Query: 300 GMNFYYFNSLLKFDCSFNMRH-TTLMVIALFLVILMRSHSLL 340
            ++     + L       +     ++ +   LV+      L 
Sbjct: 314 ELSTSSTIADLPAVLRVPLSQPVFVLGLLFVLVVYFAPGGLA 355


>gi|18313087|ref|NP_559754.1| branched-chain amino acid transport permease protein [Pyrobaculum
           aerophilum str. IM2]
 gi|18160594|gb|AAL63936.1| branched-chain amino acid transport permease protein [Pyrobaculum
           aerophilum str. IM2]
          Length = 361

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 54/363 (14%), Positives = 116/363 (31%), Gaps = 48/363 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            +    +      +L ++        Y+ +  + I IYV+    L++  G  G+ +   V
Sbjct: 1   MRRYAGVLAYIASVLVVWATGRDVNSYMLTTAVDISIYVLITLSLNLEAGIAGIPNFGRV 60

Query: 72  IAYAIGAYSYV-------------------------------ILGSRYGLSIWLLIPVSA 100
           +  A GAY                                  +      L +   + ++ 
Sbjct: 61  LTVAFGAYIAGGVLGRIALWALGLNYDYVADNPTAVSALSKTLTPPMAALLLLAGLFLAG 120

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           ++  A G+    P+ +   DYLAI  L   ++   I + ++P+  G  G+          
Sbjct: 121 IVGAAIGVASSFPARRLTADYLAITLLAFGDVAYYIGLNYEPLVGGTLGVSAPP------ 174

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                   +       V+  +    V   +   + ++   L ++      R  R++ +  
Sbjct: 175 -------IYEGIFGGGVMRAVGAALVSASVATATYALFTRLDKSPFGRILRVHREDPELV 227

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK-FSENIIVISIVILGGMT 279
             L       +  A A+  A   +AG  +A     + P  F+  +       I+++GGM 
Sbjct: 228 SMLGRDPAALRGWAMAIGGAASAVAGLLYALYVGAVHPRGFERINFTFYPWLIMVMGGMG 287

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S   + +   I I +      ++ Y +                L      LVI+     +
Sbjct: 288 SNRGVLEGVFIFIVI---YRLLDIYKYEVGNVVGFDPVWLGYILFGALAMLVIVTMPRGV 344

Query: 340 LRL 342
           +  
Sbjct: 345 VPE 347


>gi|56420471|ref|YP_147789.1| ABC transporter permease [Geobacillus kaustophilus HTA426]
 gi|56380313|dbj|BAD76221.1| ABC transporter (permease) [Geobacillus kaustophilus HTA426]
          Length = 297

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 89/309 (28%), Gaps = 18/309 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      I ++ A GL+I  G +G++++       +GAY+  ++   +   +     +
Sbjct: 6   LFNGLSVGSILLLIAIGLAITFGLMGVINMAHGELMMVGAYTTYVIQQWFTSHMPHSAGL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +     +            L      +     + L+    I+              
Sbjct: 66  YFVAAIPLSFLAAALLGWGLEKSLIRH---LYRRPLDSLLATWGISLILQQTARLIFGAP 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V              ++     ++L  +  +   + ++L +T      + +  N+ 
Sbjct: 123 NVAVVPPSWLDGGIRLFGAVFPYKRLFILCLVLAIVFFLYMYLMKTRAGRRIQAVTMNRS 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L          +FA+ S   G+AG                    +    +VILGG+
Sbjct: 183 MAACLGIATQKVDAYSFAIGSGLAGVAGCALTLLGPI--GPTIGTYYIVDAFMVVILGGV 240

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L+        +  +                            ++ + +   +  +   
Sbjct: 241 GKLAGTLLGAFGIGLISTFVEYSTSATIAK-------------VIVFVLIIAFLQWKPSG 287

Query: 339 LLRLRTPSN 347
           LL +RT S 
Sbjct: 288 LLSVRTRSL 296


>gi|315426938|dbj|BAJ48557.1| branched-chain amino acid ABC transporter permease [Candidatus
           Caldiarchaeum subterraneum]
 gi|315426979|dbj|BAJ48597.1| branched-chain amino acid ABC transporter permease [Candidatus
           Caldiarchaeum subterraneum]
          Length = 375

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 98/253 (38%), Gaps = 20/253 (7%)

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           +  ++ ++A++    G I   PS++ R DYLA+  L M E  + I    + +  G  G+ 
Sbjct: 125 LVAMVGLAAIVGAGLGFIASYPSIRLREDYLAMTLLAMGEFLRQIGYLDRTLVGGTLGVA 184

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           V D                 +     +       V+L +  L    +  +  +      R
Sbjct: 185 VPDP----------------YGWLGGLRPYAATLVMLTVAVLFFLYVRSVTYSPAGRVLR 228

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRISPDMFKFSENIIVI 270
            +RD++ A   L   ++  K     VSS    +AGA +A  S   I+ +  +F+      
Sbjct: 229 AVRDSEMAAEVLGIDVVRVKQKILVVSSMMAAVAGALWAFNSVAVIANNYDRFTWTFWPW 288

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            +VI+GG  +   +   T + + + +     N+           S       L  IAL +
Sbjct: 289 VMVIIGGAGNNRGVLLGTLVFVILRQAILTYNYLLEPF---IPFSIVWLDRLLFGIALII 345

Query: 331 VILMRSHSLLRLR 343
           V+++R   ++  +
Sbjct: 346 VLIIRPQGIVPEK 358


>gi|296535253|ref|ZP_06897463.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter [Roseomonas cervicalis ATCC 49957]
 gi|296264420|gb|EFH10835.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter [Roseomonas cervicalis ATCC 49957]
          Length = 626

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 59/318 (18%), Positives = 121/318 (38%), Gaps = 18/318 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +  +    A++      L LG      Y   +     + V+FA  L +++G  G+ S   
Sbjct: 312 FLSVTLRRALLALAAAALLLGPLLLGDYPLILLADFAVLVLFAASLQLIMGPGGMASFGH 371

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
              +  GAY+  +    +   + L + ++   +G  G+  G    +  G Y A+ TL  +
Sbjct: 372 AAFFGAGAYAAALAMKYWAAPMLLGLSLAPFAAGLAGLGFGWFFARLSGVYAAMLTLAFA 431

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           +I  +I  +W  +T G  GI                     +P+ +    +  +Y+ L +
Sbjct: 432 QILWSIAFQWVEVTGGDNGILGV------------------WPAGWARGRLEFWYLALAL 473

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
           C     ++          A R  RD+     ++       + +AF +++ + G+AGA FA
Sbjct: 474 CGGGVWLLRRAVHAPFGLALRGQRDSALRAEAIGLDTFRLRWAAFTLAAFWAGLAGAVFA 533

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             +  + P       ++  + +V+LGG+ SL+          G+ E    +   +   L 
Sbjct: 534 YGKGSVFPSFLAIGRSVDGLLMVLLGGVHSLAGPLLGAVAFAGLQEQLARVTSLWRLLLG 593

Query: 311 KFDCSFNMRHTTLMVIAL 328
               +  +     +  AL
Sbjct: 594 LTILALVLFFPQGLGGAL 611



 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 87/302 (28%), Gaps = 19/302 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +         + A GL+++ G   +++      Y +GAY    L     +  W      
Sbjct: 9   LNGLASASSLFLVASGLTLIFGVSRIVNFAHGSLYMLGAYLGWTLLQLPSVDDW---GWR 65

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                     +    +    +   +  +  +     +L  +  +   +  + +       
Sbjct: 66  GFALAVLLAALLAGGIGALLEITVLRRIYRAPELFQLLATFALVLVVQDLVLLLWGPDDK 125

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                 +          + +  +  +++     +   + L L RT      R    ++  
Sbjct: 126 FGPRAPVPLRGAIDLLGLRFPRYELFLIALGPVVLGLLWLLLHRTRFGILLRAATQDRDM 185

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L           F + +A  G+ GA                   +    +V+LGG+ 
Sbjct: 186 VAALGVDQRLLFTGVFFLGAALAGLGGALQLPREAVTPHMDMAII--VEAFVVVVLGGLG 243

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  ++  +                     F      L+ + + +V+++R + L
Sbjct: 244 SIPGAFLAALLIGELHAFGI--------------LVFPRITLVLVFLVMAVVLVLRPNGL 289

Query: 340 LR 341
           L 
Sbjct: 290 LG 291


>gi|226944075|ref|YP_002799148.1| high affinity branched chain amino acid ABC transporter permease
           [Azotobacter vinelandii DJ]
 gi|226719002|gb|ACO78173.1| high affinity branched chain amino acid ABC transporter, permease
           component [Azotobacter vinelandii DJ]
          Length = 307

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 95/306 (31%), Gaps = 17/306 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW--LLI 96
           + +       Y + A G ++V G +G+++      Y I +Y   I+ +   +     L +
Sbjct: 11  LVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIASYVAFIVIAGLSMLGLDQLPL 70

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++   + +  +         R  Y  +          + +     + N +  +    R 
Sbjct: 71  LMAGAFAASIVVASAYGYSIERIAYRPLRGGNRLIPLISAIGMSIFLQN-EVLLSQGSRD 129

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
             + + +   +         V+       +      +   + L++ R+ +  A R   ++
Sbjct: 130 KAIPSLLPGNLVIGESAMHGVVISWIQMLIFAVTLLVMLGLHLFISRSRLGRACRACAED 189

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            K    L           F + +A   +A          I+P    F   I   +  +LG
Sbjct: 190 LKMAGLLGIDTHRIIALTFVIGAALAAVAAVLLGLQYGVINPQQ-GFLAGIKAFTAAVLG 248

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        +L         +    +  ++ F               L LV+L R 
Sbjct: 249 GIGSIPGAMLGGLLLGVAEAFGADLFGDPYKDVVAFG-------------LLILVLLFRP 295

Query: 337 HSLLRL 342
             +L  
Sbjct: 296 TGILGR 301


>gi|326789583|ref|YP_004307404.1| ABC transporter transmembrane protein [Clostridium lentocellum DSM
           5427]
 gi|326540347|gb|ADZ82206.1| ABC-type transporter, integral membrane subunit [Clostridium
           lentocellum DSM 5427]
          Length = 299

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/305 (9%), Positives = 87/305 (28%), Gaps = 20/305 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      ++ + A G ++V G L L++      + +  Y      S + +  ++   +
Sbjct: 10  LVNGLTLGSLFALVAIGYTMVYGILRLINFAHGDIFMMAMYIAFFSISIFSVPWYISFIL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++   G+     + K   +  A +  ++        +     T    G         
Sbjct: 70  VIALTALLGIATEKVAYKPLREQGAPSISLLISSIGASYLMENLATVLFTGRPKNFPQIP 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T +             +  +     V +    L  +++  +  T    A R +  + +
Sbjct: 130 FFTDM--------ITVGGIHIQRLAIMVPIITLVLLLALLYLINHTKTGMAMRAVSKDVE 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +  ++     + F + SA   +    +     +I          +      ++GG+
Sbjct: 182 TARLMGISVNKVITATFGIGSALAAVGAIMWGMKYLQI-KPDVGVMPGMKCFIAAVIGGI 240

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L  +  L              F     +    +           R + 
Sbjct: 241 GNIKGAVVGGLLLGLIEVLIVAFIPSLTGYRDAFSFILLIIILLV-----------RPNG 289

Query: 339 LLRLR 343
           L+  +
Sbjct: 290 LIGEK 294


>gi|288573620|ref|ZP_06391977.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288569361|gb|EFC90918.1| inner-membrane translocator [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 293

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 84/303 (27%), Gaps = 24/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A G S+V   L   +        IG Y      +  G +IW+    
Sbjct: 8   IINGLSLGSIYALIAVGYSLVYSILMFSNFAHGGFLIIGGYLCYFALNSAGFNIWVAGFG 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +G   +     + K   +  ++   ++       ++          G + A     
Sbjct: 68  ALIGAGFAAVATERLTYKPIRERTSVTLYLLIASMGMNIVIENIFVIVAGGRFRALPPVI 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T V                       L+        + L+L +T    A R    + +
Sbjct: 128 PTTPV--------HLFGNATTSALDLISLVTAFVFLGGLQLFLTKTKWGLAIRAAACDLR 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           F V+     + G F +      +         I      ++GG+
Sbjct: 180 VAGLMGVNTSKLISIVFFVAGLLAAVGGIFLSVRY---TLYPQLGMITIKAFVAAVIGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL      + IL     L  G                +     ++   L + +++R   
Sbjct: 237 GSLPGAVVGSLILGLSEMLTAGFLS-------------SQLRDLVVFSLLVITLIVRPTG 283

Query: 339 LLR 341
           L  
Sbjct: 284 LFG 286


>gi|170743532|ref|YP_001772187.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168197806|gb|ACA19753.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 306

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 98/313 (31%), Gaps = 29/313 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89
           + +      IY + A G ++V G +G+++      + + A+         + V+      
Sbjct: 8   LINGLTLGSIYGLIAIGYTMVFGIIGMINFAHGDVFMLSAFIALIAFLLLTTVLGIGSVV 67

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +++ L++ V+  ++   G  +   + +       +A LI +      L  +  +  G   
Sbjct: 68  VALILVMIVAMALTALWGWAIERIAYQPLRGSFRLAPLISAIGVSIFLSNFVQVVQGARN 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                 L  +                 V        ++     L A     ++ T++  A
Sbjct: 128 KPTPPMLRDVIVLWTGE------NGYAVALSYKQILIMAVTAILLAGFWYLVQHTSLGRA 181

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    ++K    L   +       F + +A   +AG  +      +S     F   +  
Sbjct: 182 QRACEQDRKMASLLGIDVDRTISLTFVLGAALAAVAGTMYLLYYGVLSF-SDGFVPGVKA 240

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        I+  +           +  +  F               L 
Sbjct: 241 FTAAVLGGIGSLPGAVLGGLIIGLIETFWSAYFSIEYKDVAAFS-------------ILA 287

Query: 330 LVILMRSHSLLRL 342
           +V++     +L  
Sbjct: 288 IVLIFMPSGILGR 300


>gi|162453856|ref|YP_001616223.1| putative branched-chain amino acid ABC transporter, permease
           protein [Sorangium cellulosum 'So ce 56']
 gi|161164438|emb|CAN95743.1| putative branched-chain amino acid ABC transporter, permease
           protein [Sorangium cellulosum 'So ce 56']
          Length = 298

 Score = 72.6 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 85/292 (29%), Gaps = 16/292 (5%)

Query: 54  WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113
            GL+   G + ++++        GAY+  ++G      +         +       +   
Sbjct: 23  MGLAFSFGLMNVINMAHGEFIMAGAYTTYVIGHHVAPLVGGTEAGLWFLLALPASFLVAG 82

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
            L    + L I   +       +L  W      +           +  +  S +      
Sbjct: 83  VLGLVLE-LTIVRFLYGRPLDTLLATWGVGLVLQQAARSLFGASNVQVSSPSWLSGGVAL 141

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
           S  V       +++  +    A++  +L R+A     R +  N++    L         +
Sbjct: 142 SGGVQLPYKRVFLIALVIACIAAVYTYLHRSAGGRRLRAVMQNREMASCLGVRARRVDAA 201

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            FA+ +   G+AG                 +  +    +VILGG+  L     A  ++  
Sbjct: 202 TFALGAGLAGIAGCALTQLGSI--GPSLGTNYIVDAFMVVILGGLGRLPGTVVAALVIGV 259

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
              L                         L+   +   +  R   LL LRT 
Sbjct: 260 ANTLLELSTTASLGKA-------------LVFALVIAFLQWRPTGLLALRTR 298


>gi|117617983|ref|YP_854642.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559390|gb|ABK36338.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 308

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 85/305 (27%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +       +
Sbjct: 12  LLNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMVMAGLMMMGIDSTFL 71

Query: 99  SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
               +    +++                      I     I           +    R  
Sbjct: 72  LLGGAFLVSIVITGTYGWTIERVAYRPLRGGNRLIPLISAIGMSIFLQNMMRMAQGSRDI 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            + T +                      + +       ++  ++ R+ +  A R   ++ 
Sbjct: 132 AMPTLISGGWTLGEADGFQASLSWMQLIIFVVTFITMLALTQFIGRSRMGRACRACSEDI 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +    +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMANLLGIDTHVVISITFVLGATLAAVAGVLLGMYYGVINPY-LGFMAGLKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L  V  L  G     +  ++ F               L  V+L    
Sbjct: 251 IGSIPGAVLGGLLLGVVEALTAGYLSTEYKDVMAF-------------ALLIGVLLFMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|257388571|ref|YP_003178344.1| inner-membrane translocator [Halomicrobium mukohataei DSM 12286]
 gi|257170878|gb|ACV48637.1| inner-membrane translocator [Halomicrobium mukohataei DSM 12286]
          Length = 345

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 45/343 (13%), Positives = 103/343 (30%), Gaps = 26/343 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            LL V +   L  F+      + +     +  IYVM A GL+++ G LG+L+        
Sbjct: 11  VLLQVGFVDGLAEFVRPGTFAEVVLRGLSKAAIYVMIAAGLTLIFGLLGVLNFAHGALTM 70

Query: 76  IGAYSYVILGS--------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           IGAY   ++                 + +++ ++  + + + G+  + +  P       Y
Sbjct: 71  IGAYLGGLVMVLTVAQGTGPWARLALFFVAMAVVFGLLSALGGSIEVSLIRPLYDRPPIY 130

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
             + T  ++ + + +                    +                   V    
Sbjct: 131 QILLTFGVTLVLEELARIVVGFYG-----LQPLAEWQAALGTIPAFLETSQSLGPVSVRG 185

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
              + +       A+I  +L RT      R   ++ +   +L   +       FA+ +  
Sbjct: 186 LALFEIFLGALTVAAIWGFLTRTRYGLFIRAGSEDSEMAEALGIDVRRVFTVVFALGAGV 245

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AG          +         +    +VI+GG+ +         I+  V       
Sbjct: 246 AGVAGTLLMWDPVWGASVPLAAESLLPAFVVVIIGGLGTFRGTVVGGLIVGLVDATTTWW 305

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                                 + + L + +++R   +  +  
Sbjct: 306 FQNVVVEWTWLPE-------VAIFMILVVALIVRPQGIYGVEE 341


>gi|94984841|ref|YP_604205.1| inner-membrane translocator [Deinococcus geothermalis DSM 11300]
 gi|94555122|gb|ABF45036.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Deinococcus geothermalis DSM 11300]
          Length = 324

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 47/328 (14%), Positives = 103/328 (31%), Gaps = 39/328 (11%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS----- 91
           + + +      +Y +FA G ++V   LG+++      + +GAY    L      +     
Sbjct: 8   QNVLNGLAIGSVYAIFALGYTLVFSILGIINFAHGAVFTLGAYFTYTLVVGQFENNGLLK 67

Query: 92  -----------------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
                              L   + AM++G   +++   + +      A   L +     
Sbjct: 68  GINLFPNGSPLSGNPAVFALATLIGAMVAGLVAVLIERLAFRPMRSRGAEPLLALVSSLG 127

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+    I                G    +L          VI       +      + 
Sbjct: 128 VALVIVNLIQLLVGAEIYNFPADAYGQVQPALSFHIGDRV--VIVRTVQLIIFAVSLVML 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A +   + RT +  A R + +N      L  ++    L  F +S    G+AG     +  
Sbjct: 186 AVLGYVIGRTKVGKALRAVAENPGTASLLGISVDRFILITFFLSGFLGGLAGTLVGTAFG 245

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++   F  +  +  +++++LGG+ S+        ++                       
Sbjct: 246 -VAGPYFGVTYGLKGLAVIVLGGLGSIPGAVVGGLVIGLAEAFV--------------PA 290

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
            ++     +    LF+++L+R   LL  
Sbjct: 291 QYSAYKDAVAFALLFVILLVRPQGLLGR 318


>gi|293606936|ref|ZP_06689283.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292814668|gb|EFF73802.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 288

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 103/303 (33%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    Y + + GL+++ G + +++        IG Y   ++ +++G+  ++ +  
Sbjct: 8   VINGLLLGGAYTIISLGLTLIFGVVRVVNFAHGEFLMIGMYLVYLIAAQFGVHPYIGLVP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+I  A G +     ++   +      +  +     IL+    +  G         L  
Sbjct: 68  VAVILFALGALTQKGIIQPLLNADQHIQIFATVGVSTILLNLALVIFGANVYRAPVELGT 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V +         +F           +    L+  + L++ RT +  A R +  ++ 
Sbjct: 128 NAIDVGNYSMVTGQVITF-----------VVGIGLAVLLHLFMHRTYLGRALRAVAQHRY 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +      AF + +AF+G+A    A            F        IV+LGG+
Sbjct: 177 AATLMGVNVNNVYAIAFGLGTAFVGIAAGLLAPQYPVFPTVGTYFVLT--AFVIVVLGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL      + I+  V  L                         +      L++++R + 
Sbjct: 235 GSLYGAVAGSMIIGIVDTLAGYYI-------------APDLKEVVYFGIFLLILVLRPNG 281

Query: 339 LLR 341
           L  
Sbjct: 282 LFG 284


>gi|148256163|ref|YP_001240748.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146408336|gb|ABQ36842.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 348

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 59/330 (17%), Positives = 116/330 (35%), Gaps = 28/330 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
               L L +    +  ++  +    LI    A  L  + G  G++SL  +       Y  
Sbjct: 23  AVAALLLIMPLIANGFFLIEIFGTTLILGTIALSLMFLAGYGGMVSLMQLTIAGFAGYMV 82

Query: 82  VILGSRYG------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            + G             WL  P + +++   G + G  +++  G Y  + TL +   F  
Sbjct: 83  AVFGVSGNANISLGWPWWLATPTALVLAVLFGTLGGALAVRTEGIYTIMITLAIGAAFYY 142

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
              +   I NG  GI      +F+G   RS               I  YY+ L +     
Sbjct: 143 FTNQNWAIFNGHTGINTIATPHFIGIDWRSD--------------IAFYYLTLAVAVACY 188

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++L+L R     A + +RDN +   +L   +   +++A+A ++   G+ G     +  +
Sbjct: 189 GVVLYLSRAPFGLALQGVRDNPRRMAALGFNVNAHRIAAYAFAALIAGLGGVLQVWNYRQ 248

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ISP        I ++ + ++GG+T          I + +                +F   
Sbjct: 249 ISPGSVAVERCIDILIVAVVGGVTRPVGAYIGAFIFVMLRTFALDFLVKVGLDGNRFR-- 306

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                  L+ +    ++   S  ++ L   
Sbjct: 307 ------LLIGLGFLAIVFWSSDGVIGLYER 330


>gi|261856190|ref|YP_003263473.1| urea ABC transporter permease [Halothiobacillus neapolitanus c2]
 gi|261836659|gb|ACX96426.1| urea ABC transporter, permease protein UrtB [Halothiobacillus
           neapolitanus c2]
          Length = 308

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 98/301 (32%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++ A GL+I+ G +G++++       IGAYS  ++           +    ++
Sbjct: 22  LSLFSVLLLMALGLAIIFGQMGVINMAHGEFMTIGAYSIYVISKITEQYFPGFMAYYFVV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++      F      +   +       +L  W      +           +  T
Sbjct: 82  AIIAAFVIAFTVGYFVE--FLLIRHLYRRPLDTLLATWGLSLIMQQIFRSVFGGREVSPT 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P+  +   I   +V+L    ++A +IL L ++      R    N+    +
Sbjct: 140 LPDWLMGSWAPTPNIDIPINGLFVMLITLVVTAIVILALYKSRWGLKVRATTQNRMMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           FAV     G+AGA F       +      +  +    +V+ GG  SL 
Sbjct: 200 VGINTQKVDRMTFAVGCGVAGIAGAAFTTIAS--TGPTSGSTYIVDTFLVVVFGGAASLL 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     +                   N     + ++A+ +++++R   L   
Sbjct: 258 GTVASAFTISQAQSILTFFM-------------TNAMGKVVTLLAIIVILMLRPEGLFSS 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|222082765|ref|YP_002542130.1| branched-chain amino acid ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221727444|gb|ACM30533.1| branched-chain amino acid ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 335

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 106/290 (36%), Gaps = 13/290 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +   ++L L            ++  +++   +    L +V G  G+ +L     +  GAY
Sbjct: 25  IAIAVILVLAAAGYLLFPDNLALLTRLIAIALLVLSLDLVTGYCGVATLGHAALFGAGAY 84

Query: 80  SYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           +  I  + Y      L+  V  +     G+I G+  L+  G    + ++ +  +F     
Sbjct: 85  AAGIASAHYGINDPLLMTLVGIVAGAVAGLICGIVILRAHGLPQLVLSIALIYLFHEFAN 144

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           K    T G  G+         G               F +Y    Y   + +  ++  ++
Sbjct: 145 KVSSWTGGSDGLSGISTDPLFGL------------FEFDLYGHTAYVYGVALLLVTLVLL 192

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+      R IR +     ++  +     +  + +S A  G+ GA  A S   +  
Sbjct: 193 RILVRSPFGMLCRGIRQDPLRIRAMGVSPKVTLIKMYVISGAVAGVGGALNAISTQVVGL 252

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           D   F+++   + +++LGG  SL      T + +   +     N +++ +
Sbjct: 253 DSLSFTQSAEALVMLVLGGTGSLFGALAGTLVFMLFEDYVSAANPFHWLT 302


>gi|134294219|ref|YP_001117954.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|134137376|gb|ABO53119.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia vietnamiensis G4]
          Length = 313

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 104/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  S
Sbjct: 22  IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 81

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +GL  W ++ ++ +I GA G+ +    L++      +  L+++     ++        G
Sbjct: 82  YFGLPYWAMLVLAPLIVGAFGIAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 141

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 142 SSGQPYDVPAQLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 191

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 192 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 249

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +                     +     T++ +
Sbjct: 250 ITVFAVVVIGGMGSILGSIVTGLLLGVIEGFTRVF--------------YPEASATVVFV 295

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L R   L  
Sbjct: 296 IMAIVLLFRPAGLFG 310


>gi|332529317|ref|ZP_08405279.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
 gi|332041234|gb|EGI77598.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
          Length = 328

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 51/328 (15%), Positives = 108/328 (32%), Gaps = 18/328 (5%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
           K L L+ V+    L      +       +     LI  + A GL++V G + +L+    +
Sbjct: 10  KPLALVPVLALFALPAIGSPSTWLTLTVAGLAMGLIIFIIASGLTLVFGLMDVLNFGHGV 69

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI--ATLIMS 130
             A+GA+  V +    G  +        +++    M++ +      G          +  
Sbjct: 70  FIALGAFVAVSVLGGMGSYVQAGSLWLNLLALLPAMLVAMAVAGALGWAFERLIVRPVYG 129

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           +  + ILI    +  G+  I V      +   +   +            E F    +L  
Sbjct: 130 QHLKQILITMGGMIIGEELIKVIWGPQQIALPLPPALSGV-LYLGDAAVEKFRLLCVLVG 188

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +  ++   L RT I    R    +++   SL   I    +  F   SA  G+ G  + 
Sbjct: 189 LAVFTALAWTLNRTKIGLLIRAGVQDREMVESLGYRIQRLFIGVFVAGSALAGLGGVMWG 248

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             +  ++P M     N+++  ++I+GG+ S         ++  +      +         
Sbjct: 249 LYQQSVTPQM-GAQVNVLIFIVIIIGGLGSTLGALIGALLVGLMANYTGFL--------- 298

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHS 338
                         +  +  ++L R   
Sbjct: 299 -----VPKVALFSNIALMVAILLWRPQG 321


>gi|72382884|ref|YP_292239.1| putative membrane protein of urea ABC transport system
           [Prochlorococcus marinus str. NATL2A]
 gi|72002734|gb|AAZ58536.1| urea ABC transporter membrane protein [Prochlorococcus marinus str.
           NATL2A]
          Length = 371

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 42/324 (12%), Positives = 91/324 (28%), Gaps = 37/324 (11%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG-------- 89
           +  ++  + L   + A G+ ++ G  G+LSL   I +A+G Y   +              
Sbjct: 29  FRLNLLGRYLSLAIVALGVDLIWGFTGMLSLGQGIFFALGGYCAAMFLQLNSSGEFPNGI 88

Query: 90  ------------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
                          W     S     +  ++  + +              +        
Sbjct: 89  PEFFGLYGVEKLPFFWEPFKSSIFTLISIWLLPAIIAGLLGYLVFRNRIKGVYFSILTQA 148

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                         + +    L T V    + F       I + + +++   +  L+   
Sbjct: 149 ALLVFFNFFNGQQKLINGTNGLKTDVT---QLFGQMVGSEIMQRWFFWISAILVILAWFF 205

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             W+ R    N    IRD++          +  K   F+++    G++GA +      +S
Sbjct: 206 ARWIVRDRFGNILIGIRDDEARVRFTGYNPVIFKTIIFSIAGGLAGISGALYTVQSGIVS 265

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P       +I ++  V +GG  +L         +     L                 +  
Sbjct: 266 PQFMTVPFSIEMVVWVAVGGRGTLLGAILGAVFINYAKSLVSE--------------ALP 311

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                +      LV+      +L 
Sbjct: 312 ASWMFIQGGLFILVVTALPEGVLG 335


>gi|256828799|ref|YP_003157527.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
 gi|256577975|gb|ACU89111.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
          Length = 293

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 98/313 (31%), Gaps = 26/313 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
            +   +Y+ +       Y + A G +I+  + G+++        +G    V      G  
Sbjct: 3   PSSLLQYLITGLTLGSTYGLTALGFTIIFNTTGVINFAQGEFVMLGGMMSVYFMHSLGFG 62

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
               + ++ + +   G ++   +++   D  AI  +I++     ++     +  GK    
Sbjct: 63  EPAAVVLAVLGATMVGALVERLAIRPVRDCPAINLIIITIGVSILIRGLAMLLWGKDTHV 122

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           +                                +VL    FL  ++ L+   T    A  
Sbjct: 123 LEPFSGNQPIMFLG-----------AAIMPQAIWVLTISLFLLGALKLFFSGTIHGKAML 171

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
               + KA   +   +    L +F +S+    + G   A      +         +   +
Sbjct: 172 ACSYDTKAASLVGIGVQRMVLFSFMISALVGAVGGVILAPITM--TSYDVGIMLGLKGFA 229

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             ILGG+ +    A    IL  +  L  G     +   L F             + L ++
Sbjct: 230 ACILGGLGNPFGAAAGGVILGVLESLGAGFVSSAYKDALAF-------------VILLIL 276

Query: 332 ILMRSHSLLRLRT 344
           + ++   L  L+ 
Sbjct: 277 LFVKPSGLFGLKD 289


>gi|213971246|ref|ZP_03399363.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
 gi|213923999|gb|EEB57577.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
          Length = 293

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 93/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+ A GL+IV G +G++++      A+G+Y+  +    +      L+    +I
Sbjct: 7   FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYATYVTSVVFQRYFPELMGWYFII 66

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 ++                 + +     +L  W      +           +   
Sbjct: 67  GIGVAFLVTFAFGFLLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 124

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               ++     S  +   +   +++     ++A++ ++L R+      R +  N+    +
Sbjct: 125 TVQWLQGAWKVSEGLELPLNRIFIIGLTFVIAAAVFVFLYRSRWGLRIRAVTQNRAMAGA 184

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     G+AG+ F       +  +      +    +V+ GG+ SL 
Sbjct: 185 AGINTARVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 242

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +         +        +               + + +++  R + L   
Sbjct: 243 GTFLSAFAIGQTQISLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 289

Query: 343 R 343
           +
Sbjct: 290 K 290


>gi|257486111|ref|ZP_05640152.1| inner-membrane translocator [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|330989352|gb|EGH87455.1| inner-membrane translocator [Pseudomonas syringae pv. lachrymans
           str. M301315]
 gi|331010450|gb|EGH90506.1| inner-membrane translocator [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 300

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 92/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+ A GL+IV G +G++++      A+G+Y   +    +      L+    +I
Sbjct: 14  FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYMTYVTSVVFQRYFPELMGWYFII 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 ++                 + +     +L  W      +           +   
Sbjct: 74  GIGMAFVVTFAFGLLLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 131

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               ++     S  +   +   +++     ++A++ L+L R+      R +  N+    +
Sbjct: 132 TVQWLQGAWKISDGLELPLNRIFIIGLTFVIAAAVFLFLYRSRWGLRIRAVTQNRAMAGA 191

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     G+AG+ F       +  +      +    +V+ GG+ SL 
Sbjct: 192 AGINTARVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 249

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +         +        +               + + +++  R + L   
Sbjct: 250 GTFLSAFAIGQTQISLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 296

Query: 343 R 343
           +
Sbjct: 297 K 297


>gi|147678685|ref|YP_001212900.1| branched-chain amino acid ABC-type transport system, permease
           components [Pelotomaculum thermopropionicum SI]
 gi|146274782|dbj|BAF60531.1| branched-chain amino acid ABC-type transport system, permease
           components [Pelotomaculum thermopropionicum SI]
          Length = 293

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 110/305 (36%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G L ++++     + IGA+  ++L +     +W  +  
Sbjct: 6   VVNGLTAGATYALVAAGYTLVFGVLEIINMAHAEIFMIGAFIGLLLVTGTCCPVWAAVAG 65

Query: 99  SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           + + +G  G  +   +     +     +A LI +      L+       G   +     +
Sbjct: 66  AMIGAGLLGWALERLALRPLRKQGVSHLAPLISTIGVSIFLMSLAMKIFGPQSVRFPASV 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +             V   +    +L     L A++ + L RT +  A R + +N
Sbjct: 126 EPRFFNL----------FGTVNISLLQIVILGISLALVAALKVLLARTRLGKALRAVAEN 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   +   +     +A  ++SA  G AG       + +SP M   +  +  ++I+I+G
Sbjct: 176 PEAAGLMGVNVNSVMAAAVVMASALGGAAGVLVGLQFNAVSPTM-GIAYGLKGLAIIIVG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM S++       +L     L        +   + F             I L  V+L++ 
Sbjct: 235 GMGSVAGAVAGGLLLGAAEVLAIAYIGSSYRDAVAF-------------IILIAVLLIKP 281

Query: 337 HSLLR 341
             +  
Sbjct: 282 SGIFG 286


>gi|15600900|ref|NP_232530.1| ribose ABC transporter permease protein [Vibrio cholerae O1 biovar
           eltor str. N16961]
 gi|9657517|gb|AAF96043.1| ribose ABC transporter, permease protein [Vibrio cholerae O1 biovar
           El Tor str. N16961]
          Length = 332

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 97/312 (31%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 35  LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   ++        + + + +P + +   A G I G+   K +        + M+     
Sbjct: 94  LCG-AFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMT----- 147

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G   +Y   R    G T  +    +      +   + ++ +++       
Sbjct: 148 -------LLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWY 200

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +      T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 201 LL----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 256

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 257 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 316

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 317 AKAVVILLAVLV 328


>gi|83953673|ref|ZP_00962394.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83841618|gb|EAP80787.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
          Length = 336

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/309 (10%), Positives = 82/309 (26%), Gaps = 19/309 (6%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG---------LSIWLLIPVS 99
             + A G+++V G L   +       A+GA S V++   +           +  L +P +
Sbjct: 25  LALGALGVTLVYGILRFSNFAHGDTMALGAMSAVLITWGFQSLGLSLGVLPTALLALPFA 84

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +I+    +        F  +  A   + +        +                     
Sbjct: 85  IIITIGLLLGTDKLVYSFYREKKAKPVIFVIVSLGVTFVYNGITRFIIGAEDQRFLDGER 144

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                   +        +  +      ++    + A +  +L +T    + R   DN+  
Sbjct: 145 FIISARDFKEMTGLEEGLAIKTTQGLTVVTAVIVVAVLFWFLNKTRSGKSMRAYSDNEDL 204

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                       +  + + +     AG  +   +         F   + + +  I+GG+ 
Sbjct: 205 ALLSGINPERVVMITWIIVACLATTAGVLYGLDKSF--KPFTYFQLLLPIFAAAIVGGLG 262

Query: 280 SLSKIAKATAILIGVVE--------LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           S         ++             +   +                     +  + L +V
Sbjct: 263 SPIGAIAGGFVIAFSEVTITYAWKKVFGYLAPEGMAPDGLVQLLSTDYKFAVSFVILLIV 322

Query: 332 ILMRSHSLL 340
           +L +   L 
Sbjct: 323 LLFKPTGLF 331


>gi|83942454|ref|ZP_00954915.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
 gi|83846547|gb|EAP84423.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
          Length = 336

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/309 (10%), Positives = 83/309 (26%), Gaps = 19/309 (6%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG---------LSIWLLIPVS 99
             + A G+++V G L   +       A+GA S V++   +           +  L +P +
Sbjct: 25  LALGALGVTLVYGILRFSNFAHGDTMALGAMSAVLITWGFQSLGLSLGVLPTALLALPFA 84

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +I+    +        F  +  A   + +        +                     
Sbjct: 85  IIITIGLLLGTDKLVYSFYREKKAKPVIFVIVSLGVTFVYNGITRFIIGAEDQRFLDGER 144

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                   +        +  +      ++    + A++  +L +T    + R   DN+  
Sbjct: 145 FIISARDFKEMTGLEEGLAIKTTQGLTVVTAVIVVAALFWFLNKTRSGKSMRAYSDNEDL 204

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                       +  + + +     AG  +   +         F   + + +  I+GG+ 
Sbjct: 205 ALLSGINPERVVMITWIIVACLATTAGVLYGLDKSF--KPFTYFQLLLPIFAAAIVGGLG 262

Query: 280 SLSKIAKATAILIGVVE--------LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           S         ++             +   +                     +  + L +V
Sbjct: 263 SPIGAIAGGFVIAFSEVTITYAWKKVFGYLAPEGMAPDGLVQLLSTDYKFAVSFVILLIV 322

Query: 332 ILMRSHSLL 340
           +L +   L 
Sbjct: 323 LLFKPTGLF 331


>gi|301060571|ref|ZP_07201410.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
 gi|300445355|gb|EFK09281.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
          Length = 340

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 59/331 (17%), Positives = 120/331 (36%), Gaps = 37/331 (11%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + +I  L+A    LL+ L +      +    +     IY + A     +    G++SL  
Sbjct: 32  WREISYLMAPRTFLLMGLLVLPVFLPEVWQRVFCLAGIYSLLAIAFDFLFSYAGMVSLGG 91

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
            +   +G Y+  ILGS +GL     +P+   + G    ++ LP+L+ +G Y AIAT I  
Sbjct: 92  ALWMGVGGYTVGILGSEFGLPPVFSLPIGTFLGGGICTVLLLPTLRLKGIYFAIATFIYP 151

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            I  +I+   + I  G  G+     +                          + YV+  +
Sbjct: 152 FIISHIIEALQ-IAGGTFGLADLPVIENGW---------------------VVLYVMAVL 189

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                  I  L    +   +R++ +N +A  +   +I   +  A  ++S    +AG + +
Sbjct: 190 LTGIFFGIRRLVIEDVGMVFRSMMENDQAVSASGISITVLRTIAVYIASCIGCLAGGYLS 249

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                +    F    +I+ I+  ++GG  + +       IL+ + E              
Sbjct: 250 VLYGWVGMSFFALDFSILPIAASVIGGPGTFAGSLLGAFILVPLTEFLRPFGP------- 302

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                          + L L ++++   +  
Sbjct: 303 --------MRMVGYSVILALFVVLKPEGIFP 325


>gi|317494578|ref|ZP_07952991.1| branched-chain amino acid transport system/permease
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917508|gb|EFV38854.1| branched-chain amino acid transport system/permease
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 308

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 88/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMLGIDASWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
               +    +++                     +   I  I           +    R  
Sbjct: 72  LIGAAFIVAIVITSAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L   V                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPRLVTGQWTLGESNGFSASISTMQIIIWVVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L  +        F + +A   +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGISTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     L        +  ++ F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLILGVAEALTSAYLSTEYKDVVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|317404153|gb|EFV84599.1| branched-chain amino acid ABC transporter [Achromobacter
           xylosoxidans C54]
          Length = 288

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 102/303 (33%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    Y + + GL+++ G + +++        IG Y+  ++ +++G+  ++ +  
Sbjct: 8   VINGLLLGGAYTIISLGLTLIFGVVRVVNFAHGEFLMIGMYAVYLIAAQFGVHPYIGLVP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+I  A G +     ++   +      +  +     IL+    +  G        +L  
Sbjct: 68  VAVILFALGALTQKGIIQPLLNADQHIQIFATVGVSTILLNLALVIFGANVFRAPVQLGT 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V +                      +    L+  + L++ RT +  A R +  ++ 
Sbjct: 128 STLDVGNYSMVTG-----------QLVTFVVGLSLAVLLHLFMHRTYLGRALRAVAQHRY 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +      AF + +AF+G+A    A            F        IV+LGG+
Sbjct: 177 AATLMGVNVNNVYAIAFGLGTAFVGIAAGLLAPQYPVFPTVGTYFVLT--AFVIVVLGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL      + I+  V  L                         +      L++++R   
Sbjct: 235 GSLYGAVAGSMIIGIVDTLAGYYI-------------APDLKEVVYFGIFLLILVLRPTG 281

Query: 339 LLR 341
           L  
Sbjct: 282 LFG 284


>gi|150016637|ref|YP_001308891.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052]
 gi|149903102|gb|ABR33935.1| inner-membrane translocator [Clostridium beijerinckii NCIMB 8052]
          Length = 300

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 94/305 (30%), Gaps = 22/305 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           + + +      +Y + A G ++V G L L++      + + AY      + +GL  +   
Sbjct: 11  QNLANGISLGSLYALIAIGYTMVYGILKLINFAHGDIFMMAAYFGFFGVATFGLPWYFAF 70

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ +I+   GM +   + +   +   I+ LI +     +L     +  G          
Sbjct: 71  IIAVVITAFLGMGIEFTAYRPLRNAPKISALISAIGVSFLLENLAVVLFGG--------- 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     +         +  +   + + +    +   ++  +  T I  A R    +
Sbjct: 122 -RPKAFPDVKLFTDVIVIGGISIQRLTFIIPVVTIVILFVLLHLVNNTNIGMAMRAASKD 180

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    +   +       FA+ S    +    +     +I   M      +      ++G
Sbjct: 181 VETARLMGINVNKTISFTFAIGSGLAAVGSMMWCVKYPQIVALM-GMMPGLKCFIAAVIG 239

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+  +        IL     +            + F          L  I L +++L + 
Sbjct: 240 GIGDIKGAVIGGFILGLAEIML-----------IGFFPGLTGYRDALAFILLIVILLFKP 288

Query: 337 HSLLR 341
             ++ 
Sbjct: 289 TGIMG 293


>gi|15889683|ref|NP_355364.1| ABC transporter, membrane spanning protein (urea/amide)
           [Agrobacterium tumefaciens str. C58]
 gi|15157589|gb|AAK88149.1| ABC transporter, membrane spanning protein (urea/amide)
           [Agrobacterium tumefaciens str. C58]
          Length = 392

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 58/337 (17%), Positives = 99/337 (29%), Gaps = 33/337 (9%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           LL     A +   YI SM  + L Y + A  L +V G  G+LSL     +A+G Y+  + 
Sbjct: 33  LLLPEGSAFRIPTYIMSMLGKYLAYALLALALDLVWGYCGILSLGHAAFFALGGYAMGMY 92

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
             R   +  +                 LP      D    A L++  +   +   +    
Sbjct: 93  LMRQIGTRGVYGHPVLPDFMVFLNWKELPWFWHGFDMFWFAALMVLVVPGLLAFVFGWFA 152

Query: 145 NGKA-------------------GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                                    +  D  +     +        F          ++ 
Sbjct: 153 FRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILGFSVQADGTRAMLFA 212

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +   M  LS  I   +  +        +RD +     L   +   KL  F VS+   G+A
Sbjct: 213 MTAAMLALSLLIASGIVNSKFGKVLVGVRDAESRVRFLGFRVENIKLFTFVVSAMMAGVA 272

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA F      I+P  F  + +I V+    +GG  +L        ++ G      G     
Sbjct: 273 GALFVPQVGIINPGEFSPANSIEVVVWTAVGGRGTLIGPIIGALLVNGGKSYFTG----- 327

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                    +F       +      V L     ++  
Sbjct: 328 ---------AFPEFWLFALGGLFIAVTLFFPKGIVGT 355


>gi|154483824|ref|ZP_02026272.1| hypothetical protein EUBVEN_01528 [Eubacterium ventriosum ATCC
           27560]
 gi|149735315|gb|EDM51201.1| hypothetical protein EUBVEN_01528 [Eubacterium ventriosum ATCC
           27560]
          Length = 550

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 31/318 (9%), Positives = 85/318 (26%), Gaps = 9/318 (2%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y  I+ +   +  +   +      +   I ++  Q    +  A G++ ++   G   L+ 
Sbjct: 227 YIVIVLIFIGLCAVTPIVKNTQLLTYTNILNILQQASPRMFLALGVAGLILLTG-TDLSV 285

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +G  +  I+      +    +        + G +            L     +++
Sbjct: 286 GRMVGMGMVASTIIMHNGINTG--GVFGHIFDFSSMGPVNRAILALVVCIVLTTFFAMIA 343

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             F         I+     + +   + +    V         P+ F+        ++L  
Sbjct: 344 GFFMARFKMHPFISTMANMLIIFGLVTYATKGVSFGAIDQAIPNIFIPQIGGFPTIILWA 403

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
               A +     +T        +  N +A      ++    + AF ++    G       
Sbjct: 404 LVAIAIVWFIWNKTTFGKNLFAVGGNPEAAAVSGISVFKVTMGAFILAGILYGFGSWLEC 463

Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFY 304
                     +    ++  I+  ++      GG+  +S +     I   +      +   
Sbjct: 464 NRMIGSGSAAYGQGWDMDAIAACVVGGVSFTGGIGKISGVVTGVLIFTSLTYSLTILGID 523

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +          T 
Sbjct: 524 TNLQFIFEGIIILAAVTL 541


>gi|110834845|ref|YP_693704.1| branched-chain amino acid ABC transporter permease [Alcanivorax
           borkumensis SK2]
 gi|110647956|emb|CAL17432.1| branched-chain amino acid ABC transporter,permease protein
           [Alcanivorax borkumensis SK2]
          Length = 308

 Score = 72.6 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 92/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                I+V+ A GL+I+ G +G++++       +GAY+  +    +   +  L      +
Sbjct: 22  LSLFSIFVLMALGLAIIFGQMGVINMAHGEFMILGAYTTYLTAQLFENYLPGLYEGYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +      +             +   +       +L  W      +           +G +
Sbjct: 82  AMILAFFVTAALGALVEW--LMIRHLYHRPLDTLLATWGLSLILQQTYRSVFGAREVGVS 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +      +  V   I   +V++    ++  + L + R+      R +  N+    +
Sbjct: 140 LPDWMMGSIAVTDLVEIPINGIFVMVLALVIAFGVYLLMFRSGWGRQVRAVVQNRPMSEA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           FA+     G+AG+ F       +         +    +V+ GG  SL 
Sbjct: 200 VGIDSSKVDRVTFALGCGIAGVAGSAFTMIGS--TGPTSGQLYIVDTFLVVVFGGAQSLL 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++ +  ++++R   L  L
Sbjct: 258 GTIASAFTISQAQSTMEFFLSGSMAK-------------VLTLLVVVGILMLRPQGLFAL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|148975593|ref|ZP_01812464.1| ribose ABC transporter permease protein [Vibrionales bacterium
           SWAT-3]
 gi|145965021|gb|EDK30272.1| ribose ABC transporter permease protein [Vibrionales bacterium
           SWAT-3]
          Length = 330

 Score = 72.6 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/312 (8%), Positives = 82/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 32  LIALIFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 90

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +       +  +       +    +   + +                + F  
Sbjct: 91  LCGAFAASMIGMEIPVMVAVPTALLAGAALGAISGVIIAK------------GKVQAFIA 138

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  +       V++       
Sbjct: 139 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYAMGVPVPVWIMVVVFASVWYL 198

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG   A+    
Sbjct: 199 L-----NHTRFGRYVYALGGNESATRLSGIDVDKVKIGVYAICGLLAAVAGIIVASRLSS 253

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      ++   +  ++
Sbjct: 254 AQPTAGMGYELDAIAAVVLGGTSLAGGRGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 313

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 314 AKAVVILLAVLV 325


>gi|283787912|ref|YP_003367777.1| high-affinity branched-chain amino acid ABC transporter permease
           [Citrobacter rodentium ICC168]
 gi|282951366|emb|CBG91065.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Citrobacter rodentium ICC168]
          Length = 308

 Score = 72.6 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ L++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWVVGASENFSASITTMQLVIWVVTFIAMLALTLFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|50084917|ref|YP_046427.1| branched chain amino acid ABC transporter permease [Acinetobacter
           sp. ADP1]
 gi|49530893|emb|CAG68605.1| putative branched-chain amino acid permease protein (ABC
           superfamily, membrane) [Acinetobacter sp. ADP1]
          Length = 548

 Score = 72.6 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/291 (10%), Positives = 90/291 (30%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       IGAY+  ++ S +   +   +    +I+     I+       
Sbjct: 275 ITYGLLGVINMAHGELIMIGAYTTYVVQSLFKAHLAHWVDWYLLIAIPAAFIVSALIGML 334

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 I   +     + +L  +         + +      +  +  + +      +  +
Sbjct: 335 IER--TIIRPLYGRQLETLLATFGVSLILMQAVRMVFGAQNVEVSNITWLSGGIALTPSL 392

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       +++    +   ++  L +T      R +  N++   ++        + AF +
Sbjct: 393 MLPYNRIAIIVFTVTILLLLVFLLNKTRFGLFIRAVTQNRQMARAVGIRSARIDMMAFGL 452

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG   A   +        +  +  ++ +V                +      +
Sbjct: 453 GSGLAGLAGCALAQVGNVGPDLGQNYIIDAFLVVVVG--------------GVGQVWGAV 498

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
              +      ++L+      +    L+V+   L I  R   L  ++     
Sbjct: 499 LAALGLGVSGTILEIGLGAVLAKIILLVLV-ILFIQKRPQGLFAIKGRFVE 548


>gi|88705929|ref|ZP_01103638.1| Bacterial inner-membrane translocator [Congregibacter litoralis
           KT71]
 gi|88700000|gb|EAQ97110.1| Bacterial inner-membrane translocator [Congregibacter litoralis
           KT71]
          Length = 361

 Score = 72.6 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 53/316 (16%), Positives = 90/316 (28%), Gaps = 19/316 (6%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
                Y  S+  + L Y + A  L ++ G  GLLSL     +A+G Y+  +   R   S 
Sbjct: 40  FALSSYSVSLLGKYLCYALLALALDLLWGYAGLLSLGHGAFFALGGYAMGMYLMRQIGSR 99

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            +                 LP      D    A  +   I   + + +  +        V
Sbjct: 100 GVYGDPELPDFMIFLDWQELPWYWLGFDSFPFAMAMALLIPGILALVFGWLAFRSRVGGV 159

Query: 153 ADRLYFLGTTVRSLIRFF-------------------RFPSSFVIYEIFMYYVLLGMCFL 193
              +     T   ++ FF                    F          ++ V       
Sbjct: 160 YFSIMTQAMTFALMLAFFRNEMGFGGNNGLTDFKDVLGFDLQSDAVRCGLFVVTALTLLG 219

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           S      +  T   +    +RD +     L  ++   KL  F +S+   G+AGA +    
Sbjct: 220 SYLACRKMLTTRFGSVIIALRDGESRVRFLGYSVASYKLVVFVISAMLAGLAGALYVPQV 279

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             I+P  F    +I +   V +GG  +L        I+     L        +   L   
Sbjct: 280 GIINPGEFAPLNSIEIAIWVAVGGRGTLHGAMLGAVIIAAAETLLTAQLPELWLFALGAL 339

Query: 314 CSFNMRHTTLMVIALF 329
                         L 
Sbjct: 340 FLLVTLFLPRGFAGLL 355


>gi|330836091|ref|YP_004410732.1| inner-membrane translocator [Spirochaeta coccoides DSM 17374]
 gi|329747994|gb|AEC01350.1| inner-membrane translocator [Spirochaeta coccoides DSM 17374]
          Length = 292

 Score = 72.6 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 55/307 (17%), Positives = 99/307 (32%), Gaps = 27/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +       Y + A G +++ G L L + +    Y  GAY   +L S  G   +L   +
Sbjct: 6   IINGITIGSTYALVAIGFTMIFGVLELTNFSNSSLYMFGAYITYLLYSIVGARFFLAFTI 65

Query: 99  SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           S +++G  G  +   +     +     ++ LI +     ++     +  G          
Sbjct: 66  SIVLTGVLGYGVDRFALRRLRKKRAPKLSGLITTLGMSMVIDNSVMVFFGTDSKS----- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   + + F +F     +       +L   C L  ++ + + RT I  A   I  N
Sbjct: 121 ------FTNFMDFGKFYVGNAVVTWTQVIILSVACILMITLSIIVYRTKIGKAMGAIAQN 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           Q A   +           F VS     +AG   A     I       S    + +  ILG
Sbjct: 175 QDAARLMGINTNKVISFTFIVSGFLACVAGTMVAMYYRSIE-TSMGTSIGTKIFAAAILG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+  L        +L  V  +        +   + F               L LV+L+  
Sbjct: 234 GVGILPGAVVGGLVLGVVETMVSAYISTGYRDAISFT-------------ILILVLLIMP 280

Query: 337 HSLLRLR 343
           + L   +
Sbjct: 281 NGLFGKK 287


>gi|317402585|gb|EFV83147.1| ABC transporter [Achromobacter xylosoxidans C54]
          Length = 293

 Score = 72.6 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 59/303 (19%), Positives = 113/303 (37%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      +Y +FA G ++V G LG+++L     + +GAY+ + +   +GL +W  + V
Sbjct: 6   FVNALSLGCVYALFALGFTLVFGVLGVINLAHGAVFMVGAYAALSVVQHFGLPLWAALMV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  ++G  G+             L              +     + NG  GI+ A  L F
Sbjct: 66  AFFVAGFTGV----IIDYLVLKPLRKRNAPHLIPMIATIGVGIILNNGAQGIFGASNLRF 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              TV   +       + +   +    ++     L A ++  +RRT    A R I ++ K
Sbjct: 122 PHGTVPEEV----IEIAGLHLTVIELGIIFLSFALMALLMFVMRRTQFGRALRAIAESPK 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A + L   +    ++    ++A  G+AG       + + P M +   +  + +++ILGGM
Sbjct: 178 AAWLLGINVEKLFITTSFAAAALGGVAGVLIGLYSNALFPLMGQPMLHKGI-AVIILGGM 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +         L     L            + F               LFL++L+R   
Sbjct: 237 GDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG-------------LLFLILLVRPQG 283

Query: 339 LLR 341
           L  
Sbjct: 284 LFG 286


>gi|42527717|ref|NP_972815.1| galactoside ABC transporter, permease protein, putative [Treponema
           denticola ATCC 35405]
 gi|41818545|gb|AAS12734.1| galactoside ABC transporter, permease protein, putative [Treponema
           denticola ATCC 35405]
          Length = 564

 Score = 72.6 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/340 (10%), Positives = 89/340 (26%), Gaps = 25/340 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           +S F L    Y  IL    +   +      G   S   I ++  Q    + +A G++ ++
Sbjct: 223 LSSFLLSNGLYLAILVFFIICIIVAPLSGNGNLLSLPNIFTILEQASTRMFYALGVAGLI 282

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-WLLIPVSAMISGACGMIMGLPSLKFRG 119
              G   L+     A+G+    ++       + +  +      +      + L       
Sbjct: 283 LLAG-TDLSIGRMVALGSVITGLILHPGLNIVTFFGLGPWDFTAMPMVWRLILSLGLSIL 341

Query: 120 DYLAIATLI-----------MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
             +  +                      LI +  +  G +G      +  +   V+ L+ 
Sbjct: 342 LCVLFSAFAGVFSARLKIHPFISTLATQLIIYGLLFFGTSGT----PVGSIDNEVKDLLG 397

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                       I +  +++              +T        +  N +A      ++ 
Sbjct: 398 GRWILGIVNNEMITLPKLIIPALIAIVIAWFIWNKTVFGKNMYAVGGNSEAAAVSGISVF 457

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLS 282
              +  F ++  F G+     A   +            +  I+  ++      GG+  +S
Sbjct: 458 KVTMGVFIMAGVFYGVGSFLEAFRANA--SAGTGQGYELDAIAACVVGGISFNGGIGKIS 515

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                  I   +      +        +            
Sbjct: 516 GAVIGVIIFTSLTYCLTFLGIDTNLQFVFKGFIIIAAVAL 555


>gi|239816119|ref|YP_002945029.1| urea ABC transporter permease [Variovorax paradoxus S110]
 gi|239802696|gb|ACS19763.1| urea ABC transporter, permease protein UrtB [Variovorax paradoxus
           S110]
          Length = 304

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 88/301 (29%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++   GL+I+ G +G++++       IGAYS  +            +P    I
Sbjct: 18  LSLFAVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYSIYLAARVTESLAPAFMPYYFPI 77

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     +            L     +       +L  W      +           +  T
Sbjct: 78  AIGLAFVFAFIVGWIVEWVL--IRHLYKRPLDTLLATWGVSLGLQQIFRTFIGPKEVSPT 135

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P   +   I   +VL     ++  ++L L ++      R    N+    +
Sbjct: 136 LPEWLMGSWTPHEGLDIPINGLFVLALTALVTGGVLLALHKSRWGLRVRATVANRTMANA 195

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                +      FA+     GMAGA  A +    +         +    +V  GG  SL 
Sbjct: 196 TGIDTMKTDRLTFAIGCGIAGMAGA--AFTTIGSTGPTSGSLYIVDAFLVVTFGGAASLL 253

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     +           +L                 + L+++MR   L  +
Sbjct: 254 GTVVSAFGIAQTQSISEFFMTGSMAKVLTLS-------------LIVLILMMRPQGLFAV 300

Query: 343 R 343
           +
Sbjct: 301 K 301


>gi|78355306|ref|YP_386755.1| branched-chain amino acid ABC transporter permease [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|78217711|gb|ABB37060.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 301

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 86/289 (29%), Gaps = 3/289 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L L++      + IGAY  + L +  GL+  L    
Sbjct: 8   LTNGLAVGGIYALIALGYTMVYGVLKLINFAHGDLFTIGAYLGLTLLTSMGLTGHLGAVA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      ++                     +  + ++     +       +      
Sbjct: 68  GVLVLAVMVQVLVAIIGYLLERVAYRPLRQSPRL--SAVVSALGASIFFQNAVMLIYGAR 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  ++         +   +    + L    L   +  ++++T    A R    +Q 
Sbjct: 126 FQVYPHDILPSATVSLLGLDVPLVRILMFLTSVVLMLGLYFFIQKTRTGTAIRAAAIDQG 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       F +  A  G AG        +I+  M  +   +   +  ILGG+
Sbjct: 186 AAKLMGINVNRVVSLVFLIGPALGGAAGLMVGLYYGQINFTM-GWVYGLKAFTAAILGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            ++        +L  +  L        +   + F     +       + 
Sbjct: 245 GNIPGAMVGGLLLGVIEALGAAYISIAWKDAIAFFVLIIILIIRPTGLL 293


>gi|91978326|ref|YP_570985.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91684782|gb|ABE41084.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 308

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 95/301 (31%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   +Y++ A GL+I+ G +G++++       +GAY   +  + +   +  L P    +
Sbjct: 22  LILFSVYLLMALGLAIIFGQMGVINMAHGEFMILGAYVTWMTSNAFQAYLPSLFPGYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     I            L     +       +L  W      +           +G  
Sbjct: 82  AMILAFIASGALGMLVEWGL--IRHLYRRPLDTLLATWGLSLILQQAYRSIFGAREVGVE 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +   +  +  +   I   +V+     ++A++   + ++      R +  N+    +
Sbjct: 140 LPQWMLGSKQITDTIEVPINGIFVMCLTVLITATVAYVMYKSRWGRQVRAVVQNRVMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +         + F +     G+AG+ F       +         +    +V+ GG  SL 
Sbjct: 200 VGINTEKVDRTTFGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLVVVFGGAASLF 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++A+  +++MR   L  L
Sbjct: 258 GTIASAFSISQAQSTMEFFMSGSMAK-------------VLTLLAIVAILMMRPQGLFAL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|327480108|gb|AEA83418.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas stutzeri DSM 4166]
          Length = 305

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 95/303 (31%), Gaps = 17/303 (5%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +      + ++ A GL+I+ G +G++++       +GAY+  ++ +     +  L P   
Sbjct: 17  NGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTVGAYTTFLVSTLTLKYVPALQPYYF 76

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
            ++     ++           L     +       +L  W      +           + 
Sbjct: 77  FVAIVLSFLIAGALGWLAEWALISK--LYHRPLDTLLATWGLSLVMQQAFRSIFGAREVS 134

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
            ++   +     P+  +       +V+     L+ +I   L R+      R    N+   
Sbjct: 135 ASMPDWLMGSFNPTDAIDIPRNGLFVMAVTLLLTLAIFFLLYRSRWGLQVRATVQNRVMA 194

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            S+           FA+     G+AGA  A +    +         +    +V+ GG  S
Sbjct: 195 RSVGINTKKVDRMTFALGCGVAGVAGA--AFTTIGSTGPTSGSLYIVDTFLVVVFGGAAS 252

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L     +   +     +           +L                A+ L++++R   L 
Sbjct: 253 LFGTIASAFSIAQTQSIAEFFISGSMAKVLTLS-------------AVILILMLRPQGLF 299

Query: 341 RLR 343
            ++
Sbjct: 300 SIK 302


>gi|326796936|ref|YP_004314756.1| ABC-type transporter integral membrane subunit [Marinomonas
           mediterranea MMB-1]
 gi|326547700|gb|ADZ92920.1| ABC-type transporter, integral membrane subunit [Marinomonas
           mediterranea MMB-1]
          Length = 318

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/285 (11%), Positives = 76/285 (26%), Gaps = 9/285 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +    Y + A GLS++ G    ++L       +GA+  ++    + +S W  +  
Sbjct: 5   LLQGTLLGGYYAILAAGLSLMFGVARFINLAHGDNAILGAFIVLLGVEYFNMSPWFAMIG 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  I    G +              +  L+ +     ++        G            
Sbjct: 65  AIPIMYVLGWLTQKYVFDRTQRGGFLLPLLTTFGLAAVIQNGLFAGFGSDIRS------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   +  L       +  +        V +        + + L  +    A R    + +
Sbjct: 118 LADYIGDLSWDSWDLTDEISVGKLPVIVFVIAVVTLVGLQIVLSLSRFGRAVRATALDPE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A                 ++     +AG   A             ++ I     V++GG+
Sbjct: 178 AAQLCGIDSAEVYRKITGIAFVLSAIAGVMLAMRASIAPYS--GPAQLIFAFEAVVIGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            SL         L     +    +  +F           +    L
Sbjct: 236 GSLWGTLLGGIALGVAQSVGAFFDPQWFQLAGHSLFLLVLGVRFL 280


>gi|86145128|ref|ZP_01063459.1| ribose ABC transporter, permease protein [Vibrio sp. MED222]
 gi|218676703|ref|YP_002395522.1| ribose ABC transporter permease protein [Vibrio splendidus LGP32]
 gi|85836705|gb|EAQ54825.1| ribose ABC transporter, permease protein [Vibrio sp. MED222]
 gi|218324971|emb|CAV26807.1| ABC transporter: Transmembrane protein [Vibrio splendidus LGP32]
          Length = 330

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 87/312 (27%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 32  LIALIFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 90

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +       +  +       +    +   + +                + F  
Sbjct: 91  LCGAFAASMIGMEIPVMIAVPTALVAGAALGAISGVIIAK------------GKVQAFIA 138

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F        Y + +   +  M  + A
Sbjct: 139 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFG-----TGYAMGIPVPVWIMVVVFA 193

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           ++   L  T        +  N+ A       +   K+  +A+      +AG   A+    
Sbjct: 194 AVWYLLNHTRFGRYVYALGGNESATRLSGIDVDKVKIGVYAICGLLAAVAGIIVASRLSS 253

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      ++   +  ++
Sbjct: 254 AQPTAGMGYELDAIAAVVLGGTSLAGGRGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 313

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 314 AKAVVILLAVLV 325


>gi|92119105|ref|YP_578834.1| inner-membrane translocator [Nitrobacter hamburgensis X14]
 gi|91801999|gb|ABE64374.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Nitrobacter hamburgensis X14]
          Length = 287

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 95/303 (31%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y M A GL++V G L +++L       +GAY  + L +   +  +L +P+
Sbjct: 8   LINGTLLGGLYAMMALGLALVWGVLNIVNLAHGAFIMLGAYVSLYLFTYLHIDPFLGLPI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A +  A G  +    L          TL+++   + +L     +        +      
Sbjct: 68  TAAVMFAIGYCVQRGLLNLIVRAPMFNTLLITFGLEVVLTYLAQLAFSADFRTINP---- 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V+  +           L+  + ++L  T +  A R    N  
Sbjct: 124 -------SYAGDSIVLGPVVLPLARLLAFGVAIALTVGMWVFLLHTTLGRAIRATAQNLV 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A               F +  A  G AG  +              +      +I I+GG+
Sbjct: 177 AARLYGVEPRHLYAVTFGIGIALAGTAGGLYGTVSQI--NPYIGAALTAKSFAISIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +   +      L  +  L        +  +  F               L LV+++R   
Sbjct: 235 DNPLGVIVGGLFLGILESLTALYIGPTYADVASFG-------------VLVLVLIVRPTG 281

Query: 339 LLR 341
           LL 
Sbjct: 282 LLG 284


>gi|13474353|ref|NP_105921.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14025106|dbj|BAB51707.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 346

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 67/328 (20%), Positives = 129/328 (39%), Gaps = 16/328 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+     +  +    S    +++ +  L   +   GL+I+ G  G +SL      A GA+
Sbjct: 21  VLLLAFAYGIVPLIGSSYLFEAILLPFLALGLAGVGLNILTGYAGQVSLGSAAFMAAGAF 80

Query: 80  SYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           +      R      +  I ++ +++ A G++ GLPSL+ +G YLA++TL      Q  L 
Sbjct: 81  AAYNFNLRVEGLPLIGSIVLAGIVAAAIGIVFGLPSLRLKGFYLAVSTLAAQFFVQWALT 140

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           K+   +N  A   +                        +   +  Y   L    L   + 
Sbjct: 141 KFSWFSNNSASGVIDAPRL-------------SIGGLALDGAVGRYLFALTTVALLTFLA 187

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA-ASRDRIS 257
             L  +     +  IRDN+ A   +   ++  KL AFA+SS  IG+AG  +A A    + 
Sbjct: 188 HRLVTSQTGRNFIAIRDNETAARIIGIPVLKTKLLAFAISSFIIGVAGVIWAFAYLRTVE 247

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  F    +  ++ I+I+GG+ S+       A+++        +  +    +       +
Sbjct: 248 PAGFDLDRSFQILFIIIIGGLASIRGAFFGAALIVVFPLGLSRLGGFLLGDVFDSGV-LD 306

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRTP 345
           M    ++   + L +++    L+ L   
Sbjct: 307 MSQRIVLGALIILFLILEPDGLVALWDR 334


>gi|83944067|ref|ZP_00956523.1| putative amino acid transmembrane transmembrane protein
           [Sulfitobacter sp. EE-36]
 gi|83955066|ref|ZP_00963722.1| putative amino acid transmembrane transmembrane protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83840395|gb|EAP79568.1| putative amino acid transmembrane transmembrane protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83844934|gb|EAP82815.1| putative amino acid transmembrane transmembrane protein
           [Sulfitobacter sp. EE-36]
          Length = 318

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/323 (15%), Positives = 107/323 (33%), Gaps = 30/323 (9%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
            +    +  L+  M + GL+++   +G+L+      Y +GAY    +        W+ + 
Sbjct: 7   NLIDGLVTGLLLFMLSAGLTLIFSMMGVLNFAHASFYMLGAYFAYQISLAL--GFWMGLL 64

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           ++ ++ G  G  +    L+    Y  +  LI +     ++ +      GK  +  A    
Sbjct: 65  IAPLVVGVMGAGVERYGLRRVHQYGHVPELIFTFGLALLIEELVQFIWGKNQLPYA---- 120

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                +   + F  F  S      +  +++     +   ++  L +T +    +      
Sbjct: 121 -----IPDALNFTAFAISGNSIPAYKIFMIFISISIFIGLLYVLTKTRVGMIIQAALSYP 175

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +   +L   +    +  F V +A  G+AG          +     F    IV   +++GG
Sbjct: 176 RTVEALGHNVPLIFMGVFGVGTALAGVAGVIAGPVLG--TFPGMAFVLGSIVFVTIVIGG 233

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-----------------FNMRH 320
           + SL     A+ ++  +       N    N L     S                      
Sbjct: 234 LGSLWGALIASLLIGWITTFAKSYNIEMENILTGLGISKPESLDDSIFRDFWSLTSPQIA 293

Query: 321 TTLMVIALFLVILMRSHSLLRLR 343
             L  I + L+++ R   L   R
Sbjct: 294 DILPYILMVLILIFRPAGLFGKR 316


>gi|126656409|ref|ZP_01727670.1| high-affinity branched-chain amino acid transport permease protein
           [Cyanothece sp. CCY0110]
 gi|126622095|gb|EAZ92802.1| high-affinity branched-chain amino acid transport permease protein
           [Cyanothece sp. CCY0110]
          Length = 294

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 84/292 (28%), Gaps = 12/292 (4%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
           + + +        +  + A GL++  G L L +        +GAY   ++ ++       
Sbjct: 10  TAQNLFDGLAIGSVIALAAVGLTLTYGILRLSNFAHGDFMTLGAYLTWLVNTQGLNLGLS 69

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
           +I  +     A  +   L     R       TLI+  I   + ++   +    A     D
Sbjct: 70  VIVGATGTIVAMLISEFLLWKPMRDRRATSTTLIIISIGLALFLRNGILMIWGAKNQRYD 129

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                                 +       + ++      A + L L+ T I  A R + 
Sbjct: 130 IPLVQAQKFLG-----------LQLATDRIWAIILSIVAIAVLHLVLQNTKIGKAMRAVA 178

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           DN          +    L  + +++    + G         +      +   + + + VI
Sbjct: 179 DNIDLARVSGINVEKVVLWTWVITAILTTLGGVMLGLITSTV-RPNMGWFLILPMFASVI 237

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           LGG+ +         ++    EL        +   +       +       I
Sbjct: 238 LGGIGNPYGAIAGGLVIGVAQELSVPWLGPDYKLGVALFIMILILLIRPQGI 289


>gi|27376079|ref|NP_767608.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27349218|dbj|BAC46233.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 308

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 90/301 (29%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   +YV+ A GL+I+ G +G++++       +GAY   +  + +   +  L      +
Sbjct: 22  LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTWMTSNFFQSYLPSLFSGYFFL 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     +            L     +       +L  W      +           +G  
Sbjct: 82  AMILAFVASGALGMLVEWVL--IRHLYKRPLDTLLATWGLSLMLQQAYRSVFGAREVGVE 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +      +  +   I   +V+     ++  +   + ++      R +  N+    +
Sbjct: 140 LPQWMLGSLHVTDSIEVPINGVFVMCLTVLITLGVAYVMYKSRWGRQVRAVVQNRIMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           + +     G+AG+ F       +         +    +V+ GG  SL 
Sbjct: 200 VGINTEKVDRYTYGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLVVVFGGAASLL 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++A+  ++++R   L  L
Sbjct: 258 GTIASAFSISQTQSTLEFFMSGSMAK-------------VLTLLAVVGILMLRPQGLFAL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|156936384|ref|YP_001440300.1| branched-chain amino acid transporter permease subunit LivH
           [Cronobacter sakazakii ATCC BAA-894]
 gi|260599754|ref|YP_003212325.1| branched-chain amino acid transporter permease subunit LivH
           [Cronobacter turicensis z3032]
 gi|156534638|gb|ABU79464.1| hypothetical protein ESA_04284 [Cronobacter sakazakii ATCC BAA-894]
 gi|260218931|emb|CBA34286.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Cronobacter turicensis z3032]
          Length = 308

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 88/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDASWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
               +    +++                     +   I  I           +    R  
Sbjct: 72  LVGAAFIGAIVVSSAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDV 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L +            +           + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLFNGQWTIGSSENFAASITTMQLVIWVVTFIAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     LC       +  ++ F               L  V+L+   
Sbjct: 251 IGSIPGAMIGGLILGVTESLCSAYLSTEYKDVVSF-------------ALLIGVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|121535944|ref|ZP_01667739.1| inner-membrane translocator [Thermosinus carboxydivorans Nor1]
 gi|121305472|gb|EAX46419.1| inner-membrane translocator [Thermosinus carboxydivorans Nor1]
          Length = 294

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 103/305 (33%), Gaps = 22/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A G ++V G +GL++      + IGA+   +L + + L+++  + +
Sbjct: 7   IINGLALGGIYSLIAIGWTVVFGIIGLINWTHGEVFMIGAFVGFLLITHFKLNLFAALIL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + SG    ++   + +   +   +A  I +      L     I            L F
Sbjct: 67  AMVASGFTAFLIDRLAYRPLRNGPRLALFITALGASTFLRNLAAIIWEPHSRAYPPTLDF 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                +          + +       ++ +    + A +  ++ RT +  A      + +
Sbjct: 127 SVMIFQ-------IGGASLTVNSLQVFIFVVTLVIMAFLQWFITRTMMGKAMLAASQDIE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F VS    G AG             M      +   ++ +LGG+
Sbjct: 180 TVSLMGVEVNHLVTITFWVSGLLGGAAGVLVG--VLYAIDPMMGAMAGLKGWAVAVLGGV 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++    A  +L     +        +   + F             I + LV++++   
Sbjct: 238 GSITGAMIAGLLLGVAENIASAYISSGYRDAIAF-------------IVMILVLVIKPTG 284

Query: 339 LLRLR 343
           L+  +
Sbjct: 285 LMGFK 289


>gi|55379130|ref|YP_136980.1| branched chain amino acid transporter permease [Haloarcula
           marismortui ATCC 43049]
 gi|55231855|gb|AAV47274.1| branched chain amino acid transporter permease protein [Haloarcula
           marismortui ATCC 43049]
          Length = 305

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 98/306 (32%), Gaps = 10/306 (3%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ +  +   I ++ + GLS+V       +        +GAY   +    +G     ++
Sbjct: 6   QYLANGLVFSSIIILGSIGLSLVYSIADFANFAHGDTMTLGAYGAFVAFGVFGGLGGTVL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW-KPITNGKAGIYVADR 155
            +      +  + M L ++     ++ +   + ++    ++                   
Sbjct: 66  GLPIGFFLSLAVGMALAAVVAVLTHILVYKPLDTDSIGLLITSIGVAFVYRAVLQATFGT 125

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
            +      RS        +  V        +++    L A + L L+RT +    R   D
Sbjct: 126 DFLQYDISRSGPIPVLLDTLNVAVTQRDVAIIVSAAVLVAGLHLLLQRTTLGRKMRATAD 185

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N               L  + V SA     G F A            F+  ++V + VIL
Sbjct: 186 NPDLARVSGIRTDRVILVMWVVGSALAAAGGVFLALYSQL--DPRIGFNILLVVFAAVIL 243

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S+        ++  + EL   ++              N     +  + +  V+L+R
Sbjct: 244 GGIGSVYGAMLGGLLIGMLHELTPLLSDVGLP-------VSNAYAPAVAFVIMVAVLLVR 296

Query: 336 SHSLLR 341
              +  
Sbjct: 297 PRGIAG 302


>gi|294085354|ref|YP_003552114.1| branched-chain amino acid ABC transporter permease [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664929|gb|ADE40030.1| ABC-type branched-chain amino acid transport system permease
           component [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 328

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 58/331 (17%), Positives = 122/331 (36%), Gaps = 33/331 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             ++  L+  LFL     Q ++  +  + L++ + A  LS +   LG++S   +    I 
Sbjct: 10  ALMIMGLVFLLFLPLFADQFWLTQIATRALLWGIIAISLSFLASYLGVVSFAQMTLAGIA 69

Query: 78  AYSYVILGSRYGLS------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
            Y+    G     +        + + ++ + +   G ++GL   +  G Y  + TL +  
Sbjct: 70  GYTIAYFGPNTVENVGVLLPWPVTVILALLFATLAGALLGLICRRSTGIYAIMITLAIGM 129

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            F  +  +   + NG  G    D                      +   +  Y+++L + 
Sbjct: 130 TFFFLTRQNYSLLNGWNGFAGLDAP--------------IIAGIDISAPVPFYFLVLAVA 175

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
             ++ +I    ++ +    + +RDN +   S+      A ++A+AVS    GM G     
Sbjct: 176 LFASLLIEGFIKSPLGLVIQAVRDNPERVMSVGIPSPPAIITAYAVSGLIAGMGGVLLVW 235

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
              RIS         + V+ I ++GG+   S       I + +              +  
Sbjct: 236 YYGRISSFSVGLDPILDVLIIAVIGGLRKPSGAFVGALIFVLI-------------DVFA 282

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            D     R  T++ + L L+++M    L  +
Sbjct: 283 IDLISQDRFNTVIGLVLLLIMIMSPQGLSGM 313


>gi|88798757|ref|ZP_01114340.1| branched-chain amino acid ABC transporter, permease protein
           [Reinekea sp. MED297]
 gi|88778520|gb|EAR09712.1| branched-chain amino acid ABC transporter, permease protein
           [Reinekea sp. MED297]
          Length = 359

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/328 (12%), Positives = 99/328 (30%), Gaps = 17/328 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYI-DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
            LL V +  + F+ +    +   +  +     ++  +   G ++V G + +L+       
Sbjct: 41  GLLLVAFAFIGFVLIPDPAAWMTLTIAGLAMGMMLFVMTSGFTLVFGLMDVLNFGHGAFI 100

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI-MSEIF 133
           + GA+    + + +   I      + +      M+     +           +  +    
Sbjct: 101 SFGAFVGFSVMAMFPELIAAGSFWTHIGLFVLAMMGAAVVVGLLSWAFERLIIRHVYGNH 160

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
              ++           +      +     ++       F     ++E +    ++    L
Sbjct: 161 LMQILITTGGMIVAEEMIYVLWGHEERAWLKPDSFQGSFQFGDFVFEKYRLLAVIMGVVL 220

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              +      T +    R   +N++   SL   I    +  F   SA  GM G  +    
Sbjct: 221 FILLRWVFTHTRLGLLIRAGVENREIVKSLGFNIEKLFILVFIAGSALAGMGGVMWGLYD 280

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           + I+      +  I V  + I+GG+ S+     A  ++  +                   
Sbjct: 281 EVITAH-IGQNLMITVFIVAIIGGLGSIEGCFLAALMVGLLTNYV--------------G 325

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
             F        +I +  V+L R   L+ 
Sbjct: 326 FIFPKLALVSTLILMVAVLLWRPKGLVP 353


>gi|192290001|ref|YP_001990606.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|192283750|gb|ACF00131.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 336

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 60/327 (18%), Positives = 125/327 (38%), Gaps = 23/327 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            ++ +L+           Y   +    L+YV  A   +IV G  G +SL   +   IGA 
Sbjct: 14  WLWGILVLAACLPLALNSYHLHLLTLALVYVALASAWNIVGGMAGQVSLAHSLFIGIGAM 73

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
               L  ++G+++W  + +SA I+GA G ++     +F+  +L+   + ++      +I 
Sbjct: 74  LSTALLVKFGINMWAGLVISAAIAGALGAMIAWIDFRFQLGHLSFVLITLAFAEMGAIIV 133

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                 G A   +  R        +                   ++V+LG+      + +
Sbjct: 134 EGWEFLGGASGLLLPRDTGDFWAFQ------------FGGGRGAFWVMLGLAAAVVLVNV 181

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +    +    RTIRDN+KA  ++   ++  K++A  +S+    + G  +        P 
Sbjct: 182 AILNAPLGYYLRTIRDNEKAAQAIGVNVLRHKITAMTISAVLTSIVGTCYVRYLTFADPY 241

Query: 260 -MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            +   +  I ++    +GG+      A    +L+ + E+  G          +   +   
Sbjct: 242 LLATPTITIEIVLFATVGGLGRAFGPALGALLLVPLGEVLRG----------QLGGAVPG 291

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345
            H  +  + + +VIL+    LL L   
Sbjct: 292 LHYFIYGVVVIVVILVTPRGLLPLAER 318


>gi|28493527|ref|NP_787688.1| branched-chain amino acid ABC transporter permease protein
           [Tropheryma whipplei str. Twist]
 gi|28572361|ref|NP_789141.1| ABC transporter branched chain amino acid transport permease
           [Tropheryma whipplei TW08/27]
 gi|28410492|emb|CAD66878.1| putative ABC transporter branched chain amino acid transport
           permease [Tropheryma whipplei TW08/27]
 gi|28476569|gb|AAO44657.1| branched-chain amino acid ABC transporter permease protein
           [Tropheryma whipplei str. Twist]
          Length = 334

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/266 (12%), Positives = 69/266 (25%), Gaps = 5/266 (1%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                IY + A G ++V G LGL++      +  G Y+ V   S  G S +       ++
Sbjct: 33  LTFGAIYALIAVGYTVVYGVLGLINFAHAGVFVTGCYALVFTLSALGFSSFPSKKPIFIV 92

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG-----KAGIYVADRLY 157
                + + +  L        +  +    + +        +                R  
Sbjct: 93  LIYVLIAVFVSILAAAAVAFLVERVAYKPLRKRNAPNLAFLITAIGASLTISNLFFLRSP 152

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                +        F         F    +L    L   +  ++RRT      R +  + 
Sbjct: 153 NPEPALSIFTPVPLFKFFGATVTSFNVVTILAAVILMFLVDWFIRRTRFGRGIRAVAQDP 212

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                +           F +     G A  F+                 +   +  +LGG
Sbjct: 213 NTASLVGVNPERVIALTFVLGGVIAGAASLFYVLKVPSGVVYNADIVLGLKAFAAAVLGG 272

Query: 278 MTSLSKIAKATAILIGVVELCCGMNF 303
           + S+        +L         +  
Sbjct: 273 IGSIRGALLGGLLLGLFSNWGALLLG 298


>gi|167916834|ref|ZP_02503925.1| ABC transporter, permease/ATP-binding protein [Burkholderia
           pseudomallei 112]
          Length = 475

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 4   ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 64  GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVIAAV 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAW----------- 280

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 281 ----LLYLGLLFVAVVLAAPGG 298


>gi|332528412|ref|ZP_08404404.1| branched-chain amino acid ABC transporter permease [Hylemonella
           gracilis ATCC 19624]
 gi|332042091|gb|EGI78425.1| branched-chain amino acid ABC transporter permease [Hylemonella
           gracilis ATCC 19624]
          Length = 304

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 93/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++   GL+I+ G +G++++       IGAY+  +L +        L+P    +
Sbjct: 18  LSLFSVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTVFLLSTLTEKFAPDLVPFYFPV 77

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           S     ++   +       L     +       +L  W      +     A     +  T
Sbjct: 78  SIIVAFVLAFVAGWLVEWGL--IRFLYKRPLDTLLATWGLSLAVQQVFRSAIGPKEVSPT 135

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P   +   I   +VL     ++  +++ L ++      R    N+    +
Sbjct: 136 LPEWLMGSWAPHEGLDIPINGLFVLALTAVVTGGVLIALYKSRWGLRVRATVSNRTMANA 195

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           FA+     G+AGA  A +    +         +    +V  GG  SL 
Sbjct: 196 IGINTSRTDRLTFAIGCGIAGVAGA--AFTTIGSTGPTSGSLYIVDSFLVVTFGGAASLL 253

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     +           +L                 + +++++R   L   
Sbjct: 254 GTVASAFGIAQTQSIGEFFITGSMAKVLTLS-------------LIVVILMIRPQGLFAS 300

Query: 343 R 343
           +
Sbjct: 301 K 301


>gi|325475071|gb|EGC78257.1| galactoside ABC transporter [Treponema denticola F0402]
          Length = 564

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/340 (10%), Positives = 90/340 (26%), Gaps = 25/340 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           +S F L    Y  IL    +   +      G   S   I ++  Q    + +A G++ ++
Sbjct: 223 LSSFLLSNGLYLAILVFFIICIIVAPLSGNGNLLSLPNIFTILEQASTRMFYALGVAGLI 282

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-WLLIPVSAMISGACGMIMGLPSLKFRG 119
              G   L+     A+G+    ++       + +  +      +    + + L       
Sbjct: 283 LLAG-TDLSIGRMVALGSVITGLILHPGLNIVTFFGLGPWDFTAMPMVLRLILSLGLSIL 341

Query: 120 DYLAIATLI-----------MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
             +  +                      LI +  +  G +G      +  +   V+ L+ 
Sbjct: 342 LCVLFSAFAGVFSARLKIHPFISTLATQLIIYGLLFFGTSGT----PVGSIDNEVKDLLG 397

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                       I +  +++              +T        +  N +A      ++ 
Sbjct: 398 GRWILGIVNNEMITLPKLIIPALIAIVIAWFIWNKTVFGKNMYAVGGNSEAAAVSGISVF 457

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLS 282
              +  F ++  F G+     A   +            +  I+  ++      GG+  +S
Sbjct: 458 KVTMGVFIMAGVFYGVGSFLEAFRANA--SAGTGQGYELDAIAACVVGGISFNGGIGKIS 515

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                  I   +      +        +            
Sbjct: 516 GAVIGVIIFTSLTYCLTFLGIDTNLQFVFKGFIIIAAVAL 555


>gi|226356148|ref|YP_002785888.1| branched-chain amino acid ABC transporter permease [Deinococcus
           deserti VCD115]
 gi|226318138|gb|ACO46134.1| putative Branched-chain amino acid ABC transporter, permease
           component [Deinococcus deserti VCD115]
          Length = 295

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 95/303 (31%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   +Y +   GLS++ G + +++       AIG +  + L     +  +L + V
Sbjct: 13  LVQGLLTGGLYALIGTGLSLIFGVMKVINFAHGDFLAIGMFITLALFRTLNIDPYLSLLV 72

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A +  A G  +    L   GD L   +++ +     I+     +  G     +      
Sbjct: 73  AAPVGFALGYAIQRFVLTRLGDRLGEGSMLATLGLGLIISNTLLLGFGAQPQSINVP--- 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        F  + V   I +    LG   + A + L L RT +  A R    N  
Sbjct: 130 --------YAIKTFSFAGVQVSIPLLVAGLGTLVVIAGLNLLLYRTELGRAIRATAQNPL 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                       +   F +  AF  +AG                 +       + +LGG+
Sbjct: 182 GAELQGVRTANIQAIVFGMGVAFAAIAGVLLMPLLYA--FPTVGENYTTKAFIVTVLGGL 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L  +  L                   N       +IA  LV+L+R   
Sbjct: 240 GNLPGAVVGGLVLGVIESLGAFYVS-------------NNYRDAYGLIAFLLVLLLRPEG 286

Query: 339 LLR 341
           L  
Sbjct: 287 LFG 289


>gi|148508166|gb|ABQ75957.1| ABC-type branched-chain amino acid transport system, permease
           protein I [uncultured haloarchaeon]
          Length = 312

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 99/306 (32%), Gaps = 19/306 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ +  +   ++   A G +++ G + +++L       +G YS       +        
Sbjct: 23  QFVVNGLLVGALFTAVAVGFALIWGVVDIINLAHGEMVMLGGYSSY-WILNFLTGDAEGS 81

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +I+    + +           L    +        ++     I             
Sbjct: 82  VTLFLITIPLVIGIVFVIGYALQRILVARVIGTDIFLTLLVTFGISI---AIQQLAIQAW 138

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 ++ L        + ++         +G   L+ ++ ++L+RT    A R +  N
Sbjct: 139 SANPRAIQILFTDPSLSVAGIVIPKMKLISFIGAIGLTVALYVFLQRTRTGRAIRAVSQN 198

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   +   +   +   F +SSA    AGAF A   +            +    IV+ G
Sbjct: 199 PEAAALVGIDVEHTRAVTFGISSAIASGAGAFIATILNI--QPQMGLIYTLKSFVIVVFG 256

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+  +     +L  V EL  G+    +   + F               L ++++++ 
Sbjct: 257 GVGSIPGVFIGGLMLGTVEELTAGLVSSQWTLAVSFS-------------LLIVLLIVKP 303

Query: 337 HSLLRL 342
             L   
Sbjct: 304 TGLFGE 309


>gi|24114717|ref|NP_709227.1| branched-chain amino acid transporter permease subunit LivH
           [Shigella flexneri 2a str. 301]
 gi|30065266|ref|NP_839437.1| branched-chain amino acid transporter permease subunit LivH
           [Shigella flexneri 2a str. 2457T]
 gi|24053931|gb|AAN44934.1| high-affinity branched-chain amino acid transport protein, membrane
           component [Shigella flexneri 2a str. 301]
 gi|30043528|gb|AAP19248.1| high-affinity branched-chain amino acid transport protein, membrane
           component [Shigella flexneri 2a str. 2457T]
 gi|281602805|gb|ADA75789.1| High-affinity branched-chain amino acid transport protein, membrane
           component [Shigella flexneri 2002017]
 gi|332749444|gb|EGJ79861.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Shigella flexneri K-671]
 gi|332751135|gb|EGJ81538.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Shigella flexneri 2747-71]
 gi|332763560|gb|EGJ93799.1| branched-chain amino acid transport system / permease component
           family protein [Shigella flexneri 2930-71]
 gi|332996243|gb|EGK15870.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Shigella flexneri VA-6]
 gi|332996595|gb|EGK16220.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Shigella flexneri K-272]
 gi|332997120|gb|EGK16736.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Shigella flexneri K-218]
 gi|333012589|gb|EGK31970.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Shigella flexneri K-304]
 gi|333013004|gb|EGK32380.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Shigella flexneri K-227]
          Length = 308

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYCVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|154245510|ref|YP_001416468.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154159595|gb|ABS66811.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 339

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 67/304 (22%), Positives = 118/304 (38%), Gaps = 25/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +  +   +L++   A   +IV G    +SL     + +GAY+  +L  + G+S WL + V
Sbjct: 32  LLRVAAMVLLFAAMAQSWNIVGGLANQISLGHAAFFGLGAYTSTLLFLKLGVSPWLGMFV 91

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A ++GA   ++ +P+ + +G Y A+ATL  +E+ + I   W  +T G  G+ +      
Sbjct: 92  GAGVAGAAAALLSIPTFRLKGHYFALATLAFAEVMRVIANSWASLTGGPVGLSIPFMGTQ 151

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +                Y+ +LG+      +   L R AI    R +R+N+ 
Sbjct: 152 PAYFAFRAVS-------------SYYWAILGLLVFVCLVFHLLARGAIGYRLRAVRENEN 198

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV--ISIVILG 276
           A           KL+A  +S+A   M G  FA       PD       I V    I I+G
Sbjct: 199 AAEVAGVDTFRVKLTASVISAALTAMCGTVFAQFTFFFDPDSIFSLAGISVRMAMIAIVG 258

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +L         LI + E+                         +  + L   IL++ 
Sbjct: 259 GLGTLGGPLIGALFLIPLEEVANAY----------LSSKAAGLSQLVFGLILIAAILIQP 308

Query: 337 HSLL 340
             ++
Sbjct: 309 RGVM 312


>gi|194397862|ref|YP_002037396.1| branched-chain amino acid ABC transporter permease [Streptococcus
           pneumoniae G54]
 gi|194357529|gb|ACF55977.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae G54]
          Length = 289

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 106/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L + + ++ ++ + V
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFIGYFLINSFQMNFFVALIV 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +       IA LI +     +L        G            
Sbjct: 65  AMLATAILGVVIEFLAYRPLRHSTRIAVLITAIGVSFLLEYGMVYLVGAN---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+  R+    +        +L     L   + + +++T +  A R +  +  
Sbjct: 115 -TRAFPQAIQTVRYDLGPISLTNVQLMILAISLILMILLQVIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GVTPGLKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                      +     ++   L L++++R   
Sbjct: 233 GIIPGAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAG 279

Query: 339 LLR 341
           +L 
Sbjct: 280 ILG 282


>gi|238896916|ref|YP_002921661.1| branched-chain amino acid transporter permease subunit LivH
           [Klebsiella pneumoniae NTUH-K2044]
 gi|262040517|ref|ZP_06013758.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|290511968|ref|ZP_06551336.1| branched-chain amino acid transporter permease subunit LivH
           [Klebsiella sp. 1_1_55]
 gi|329998308|ref|ZP_08303045.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Klebsiella sp. MS 92-3]
 gi|238549243|dbj|BAH65594.1| high-affinity branched-chain amino acid transporter membrane
           component [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259042110|gb|EEW43140.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|289775758|gb|EFD83758.1| branched-chain amino acid transporter permease subunit LivH
           [Klebsiella sp. 1_1_55]
 gi|328538752|gb|EGF64837.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Klebsiella sp. MS 92-3]
          Length = 308

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 98/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTQGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            S           + +       ++ L++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWVVGHSDSFSATITTMQLVIWVVTFIAMLALTLFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|107100518|ref|ZP_01364436.1| hypothetical protein PaerPA_01001543 [Pseudomonas aeruginosa PACS2]
          Length = 297

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 91/305 (29%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I  +   +     +P+
Sbjct: 1   MVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYIAFIAITLLAMMGLDSVPL 60

Query: 99  SAMIS-GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             + +  A  ++                      I     I           +    +  
Sbjct: 61  MMLAAFAASIIVTSAFGYSIERVAYRPLRGGNRLIPLISAIGMSIFLQNAVMLSQDSKEK 120

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            + T +     F     + V+       + +    +   + L++ R+ +  A R   ++ 
Sbjct: 121 AIPTLLPGNFVFGESSMNGVVISYMQILIFVVTFLVMFGLTLFISRSRLGRACRACAEDL 180

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +A          I+     F   I   +  +LGG
Sbjct: 181 KMTNLLGINSNNIIALTFVIGAALAAVAAVLLGMQYGVIN-PGIGFLAGIKAFTAAVLGG 239

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L         +    +  ++ F               L LV+L R  
Sbjct: 240 IGSIPGAMLGGLLLGVAEAFGADVFGDQYKDVVAFG-------------LLILVLLFRPT 286

Query: 338 SLLRL 342
            +L  
Sbjct: 287 GILGR 291


>gi|326317160|ref|YP_004234832.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323373996|gb|ADX46265.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 440

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/328 (15%), Positives = 114/328 (34%), Gaps = 18/328 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            +      L  +      +     +M  QI   ++     +I++G  G+LS    +   +
Sbjct: 20  AVVWGLFALALIVAPMLFTSSLALTMLSQIGYLIIICLSYNILLGQGGMLSFGHAVYTGL 79

Query: 77  GAYSYVILGSR-----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           G++  V   +        + + L+  V  +      +++G  + K  G   A+ TL + E
Sbjct: 80  GSFMAVHAMNWAGKGALPVPLVLIPLVGGLAGMFFAVLLGFVTTKKSGTTFAMITLGIGE 139

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +  ++ + +  +  G+ GI                +    F        I +YY++   C
Sbjct: 140 LVASMALMFPEVFGGEGGIT------------TDRVYGKGFFGITFGPAIQVYYLIAAYC 187

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           F+  +++     T +      +RDN +    +       +  AF +S  F G+ GA  A 
Sbjct: 188 FVCTALMFAFTGTPLGRMLNAVRDNPERVEFIGYNTQRVRYYAFIISGFFAGIGGALAAI 247

Query: 252 SRDRIS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           + + ++  D      +   +    LGG T          +L+    L   ++  +   L 
Sbjct: 248 NFEIVTAADSVSVMRSGSYLLFTFLGGATFFFGPIIGAVLLVFASVLLSELSKAWLLYLG 307

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHS 338
                  M     +   + + + +  H 
Sbjct: 308 LVFLFMVMYAPGGIASLIMMNLRVARHG 335


>gi|283798555|ref|ZP_06347708.1| galactoside ABC transporter, permease protein MglC [Clostridium sp.
           M62/1]
 gi|291073703|gb|EFE11067.1| galactoside ABC transporter, permease protein MglC [Clostridium sp.
           M62/1]
 gi|295092420|emb|CBK78527.1| monosaccharide ABC transporter membrane protein, CUT2 family (TC
           3.A.1.2.-) [Clostridium cf. saccharolyticum K10]
          Length = 551

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/325 (9%), Positives = 85/325 (26%), Gaps = 9/325 (2%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F LR   Y  I+ +   +  +   +      +   + ++  Q    +  A G++ ++   
Sbjct: 221 FLLRNGLYIAIILIFIALCIITPMVKGVPLLTYNNVLNILQQASPRMFLALGVAGLILLA 280

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G   L+      +G  +  I+  +   +  +   V    S    + +           L 
Sbjct: 281 G-TDLSVGRMVGMGMTTATIIMHQGINTGMVFGHVFDFTSLPVPVRVIFALFM--CVVLC 337

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
                ++  F         I+     + +   + +    V         P   +      
Sbjct: 338 TFFTTIAGFFTAKFKMHPFISTMANMLVIFGLVTYSTKGVSFGAIESSIPGMIIPKINGF 397

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
             ++L        +     +T        +  N +A      ++    + AF ++    G
Sbjct: 398 PTIILWAVAAVIIVWFIWNKTTFGKNLFAVGGNAEAAAVSGISVFRVTVGAFILAGILYG 457

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVEL 297
                            +     +  I+  ++      GG+  +S +     I   +   
Sbjct: 458 FGSWLECIRMVGSGSAAYGQGWEMDAIAACVVGGVSFTGGIGKISGVVVGVFIFTALTYS 517

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTT 322
              +        +          T 
Sbjct: 518 LTILGIDTNLQFVFSGIIILSAVTL 542


>gi|261420158|ref|YP_003253840.1| urea ABC transporter permease [Geobacillus sp. Y412MC61]
 gi|297529892|ref|YP_003671167.1| urea ABC transporter permease [Geobacillus sp. C56-T3]
 gi|319766970|ref|YP_004132471.1| urea ABC transporter permease UrtB [Geobacillus sp. Y412MC52]
 gi|261376615|gb|ACX79358.1| urea ABC transporter, permease protein UrtB [Geobacillus sp.
           Y412MC61]
 gi|297253144|gb|ADI26590.1| urea ABC transporter, permease protein UrtB [Geobacillus sp.
           C56-T3]
 gi|317111836|gb|ADU94328.1| urea ABC transporter, permease protein UrtB [Geobacillus sp.
           Y412MC52]
          Length = 297

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 89/309 (28%), Gaps = 18/309 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      I ++ A GL+I  G +G++++       +GAY+  ++   +   +     +
Sbjct: 6   LFNGLSVGSILLLIAIGLAITFGLMGVINMAHGELMMVGAYTTYVIQRWFTSHMPHSAGL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +     +            L      +     + L+    I+              
Sbjct: 66  YFVAAIPLSFLAAALLGWGLEKSLIRH---LYRRPLDSLLATWGISLILQQTARLIFGAP 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V              ++     ++L  +  +   + ++L +T      + +  N+ 
Sbjct: 123 NVAVVPPSWLDGGIRLFGAVFPYKRLFLLCLVLAIVFFLYMYLMKTRAGRRIQAVTMNRS 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L          +FA+ S   G+AG                    +    +VILGG+
Sbjct: 183 MAACLGIATQKVDAYSFAIGSGLAGVAGCALTLLGPI--GPTIGTYYIVDAFMVVILGGV 240

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L+        +  +                            ++ + +   +  +   
Sbjct: 241 GKLAGTLLGAFGIGLISTFVEYSTSATIAK-------------VIVFVLIIAFLQWKPSG 287

Query: 339 LLRLRTPSN 347
           LL +RT S 
Sbjct: 288 LLSVRTRSL 296


>gi|192289589|ref|YP_001990194.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|192283338|gb|ACE99718.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 332

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 103/288 (35%), Gaps = 12/288 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   ++  L            +  I+++        L +V G  G+ +L     + +GA
Sbjct: 20  LIAAAVIAVLGAIGYFVYPDDLAFLIRVIGLAFLVISLDLVTGYCGVATLGHAALFGVGA 79

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+             L++ + A+   A G++ GL   +FRG    + ++   ++   +  
Sbjct: 80  YAAGNFCLAGVTDPILMLLIGALAGTATGLVSGLLVTRFRGLPQLVLSIAFGQLVAALAN 139

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           K   IT G  G+         G              +F ++    Y   + +  ++   +
Sbjct: 140 KLSSITGGSDGLAGISPSPVFGI------------FNFDMFGRTGYVFSVIVLLVTMVTL 187

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           L   R+  +   R I+D+      +  ++    +  + V+ A  G+ GA  A +   +  
Sbjct: 188 LRFARSPFALLCRAIKDDTLRTRMIGVSVYPRLVVMYCVAGAVAGLGGALTAINTGVVGL 247

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           D   F  +   + ++ILGG  +L        +           + +++
Sbjct: 248 DSVSFERSAEALIMLILGGAGNLWGALIGAILFELFHHYVSTASPFHW 295


>gi|311108035|ref|YP_003980888.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310762724|gb|ADP18173.1| inner-membrane translocator 48 [Achromobacter xylosoxidans A8]
          Length = 288

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 99/303 (32%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    Y + + GL+++ G + +++        IG Y   ++ +++G+  +  +  
Sbjct: 8   VINGLLLGGAYTIISLGLTLIFGVVRVVNFAHGEFLMIGMYMVYLIAAQFGVHPYAGLVP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+I  A G +     ++   +      +  +     IL+    +  G         L  
Sbjct: 68  VAVILFALGALTQKGIIQPLLNADQHIQIFATVGVSTILLNLALVIFGANVYRAPVELGT 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +                        +    L+  + L++ RT +  A R +  ++ 
Sbjct: 128 NAIDIGPYSMVTG-----------QLITFVIGLSLAVLLHLFMHRTYLGRALRAVAQHRY 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +      AF + +AF+G+A    A            F        IV+LGG+
Sbjct: 177 AATLMGVNVNNVYAIAFGLGTAFVGIAAGLLAPQYPVFPTVGTYFVLT--AFVIVVLGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL      + I+  V  L                         +      L++++R + 
Sbjct: 235 GSLYGAVAGSMIIGIVDTLAGFYI-------------APDLKEVVYFGIFLLILVLRPNG 281

Query: 339 LLR 341
           L  
Sbjct: 282 LFG 284


>gi|317154666|ref|YP_004122714.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2]
 gi|316944917|gb|ADU63968.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2]
          Length = 303

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 92/294 (31%), Gaps = 1/294 (0%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           + I +       Y + A G ++V G L L++      + +GAY    + S     ++ L 
Sbjct: 6   QNILNALQWGSFYALIALGYTLVYGVLTLINFAHGDIFMVGAYIAFFVASWLLGPVFGLD 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P    +      ++    +    + +A   L      +  ++    +            L
Sbjct: 66  PTITFVLAIPLTMILTACVGVTLERIAYRPLRRKGAHRLYVVITALMCGLILEYGNLAAL 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                    L+    +    V        V+     +   +   + +T I  A R I  +
Sbjct: 126 GASRKKFPDLLDKVIWDIGGVSVTNLKVLVIFAAIAVFIFLNFIVTKTKIGMAMRGISYD 185

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   I    +  F + S+F G+AG  FA S   + P M         I+ V+ G
Sbjct: 186 KFAIPLMGIPIDAIIVFTFILGSSFAGLAGLLFAMSYPILEPFMGALIGWKAFIAAVV-G 244

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           G+  +        +L  +      +    +  L  F     +       +    
Sbjct: 245 GIGDIRGAFYGGFLLGFIEVGVVTVFPSTYRDLFAFTILLAILWMKPTGLFGVA 298


>gi|330810581|ref|YP_004355043.1| High-affinity branched-chain amino acid ABC transporter permease
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327378689|gb|AEA70039.1| putative High-affinity branched-chain amino acid ABC transporter,
           permease component [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 395

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/338 (13%), Positives = 92/338 (27%), Gaps = 36/338 (10%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-- 84
              +       +  +M  + L Y   A GL +  G  G+LSL   + + +G Y   +   
Sbjct: 24  IFVVFPLTLDAFRLNMVGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFGVGGYCMAMFLK 83

Query: 85  ----------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
                               +            +     S       L    L       
Sbjct: 84  LEASDPQSTKIQSTPGIPDFMDWNQITELPWLWVPFHSFSFTLLAVILVPVVLAFIIGMA 143

Query: 135 NILIKWKPITNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
               +   +                I     L      +  L     +       ++ +Y
Sbjct: 144 LFKRRVGDVYFSIVSQAIALILTVLIVGQQGLTGGVNGITDLKTLLGWDLRSDSAKLLLY 203

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           ++   + F    I  ++  + +      +RD ++        +   K+  F +++AF  +
Sbjct: 204 FINAALLFGCIFIGRFVLASKLGRLLMAMRDKEERVRFSGYDVASFKIFVFCIAAAFSAI 263

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            GA FA     +SP       +I ++    +GG  SL        ++             
Sbjct: 264 GGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGALLVNYGKTY------- 316

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  F  SF      LM      V++   + L  L
Sbjct: 317 -------FSESFPELWLYLMGGLFIAVVMYFPNGLAGL 347


>gi|330502355|ref|YP_004379224.1| inner-membrane translocator [Pseudomonas mendocina NK-01]
 gi|328916641|gb|AEB57472.1| inner-membrane translocator [Pseudomonas mendocina NK-01]
          Length = 307

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 86/290 (29%), Gaps = 2/290 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y    + +   +     +PV
Sbjct: 11  LLNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFTVIAGLAMFGIDAVPV 70

Query: 99  SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             + + A  MI+                      I     I           +    +  
Sbjct: 71  IMVAAFAATMIVTSAYGYSIERVAYRPLRGGNRLIPLISAIGMSIFLQNAVLLAQDSKDK 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   +          ++ V+       + +        + L++ R+ +  A R   ++ 
Sbjct: 131 AIPNPLPGNFILGESAANGVVVSYMQVLIFIVTFITMVGLTLFISRSRLGRACRACAEDL 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +A      +   I+P    F   I   +  +LGG
Sbjct: 191 KMANLLGINTNNIIALTFVIGAALAAIASVLLGMNYGVINPH-LGFLAGIKAFTAAVLGG 249

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           + S+        +L         +    +  ++ F     +       I 
Sbjct: 250 IGSIPGAVLGGLLLGVSEAFGADIFGDQYKDVVAFSLLVLVLLFRPTGIL 299


>gi|300718819|ref|YP_003743622.1| high-affinity branched-chain amino acid ABC transporter permease
           [Erwinia billingiae Eb661]
 gi|299064655|emb|CAX61775.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Erwinia billingiae Eb661]
          Length = 308

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 88/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +    +  +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDVSWM 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
                    +++                     +   I  I           +    R  
Sbjct: 72  LIGAGFIVAIVIASAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + +                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLITGQWTLGESNGFSATISTMQVVIWVVTFLSMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     L        +  ++ F               L +V+L+   
Sbjct: 251 IGSIPGAMLGGLILGIAEALTSAYLSTEYKDVVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|88601638|ref|YP_501816.1| inner-membrane translocator [Methanospirillum hungatei JF-1]
 gi|88187100|gb|ABD40097.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Methanospirillum hungatei JF-1]
          Length = 293

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 92/284 (32%), Gaps = 12/284 (4%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                IY++ A GL+++ G + +++        +G Y    L    G + ++L+  S  +
Sbjct: 16  LYTGCIYILLATGLNLIFGVMKIVNFAHGEFLMLGTYITFFLFVMSGFNPYVLLCASIPL 75

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G+I+     +       +  + +S     I+                        T
Sbjct: 76  LVVIGVIVERLCFRPILGTGKLNEIFVSIGLIYIIQNLVARIW-----------TDEWKT 124

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           ++S  R        +   +    ++     L  S+ ++L  T    A R    ++K    
Sbjct: 125 IQSPFRDISVDLGVIQVPLDYLIIMAVTAILLISLYIFLHHTWTGQAIRATSQDRKGAML 184

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +    +  F + +A  G AG  +A S  ++          I   +I+ILGG+ S+ 
Sbjct: 185 MGINVERMDMVTFGIGAALAGAAGTLWAVS-GQVFNPYMGSIPAIKAFAIIILGGLGSIP 243

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
                   +  V           +   + F     +       +
Sbjct: 244 GAIVGGLAVGLVENGTAFTLGGAWKDAVSFILLIIVLIIRPTGL 287


>gi|302336777|ref|YP_003801983.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
 gi|301633962|gb|ADK79389.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
          Length = 376

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/325 (11%), Positives = 91/325 (28%), Gaps = 11/325 (3%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           FS+ +        +  +   ++         S   + +M     I+ + A G++ V+   
Sbjct: 29  FSIGMLVLKLRTLIAFLAVLIVFSFIAPNFLSITNLIAMAKHSAIWAILAVGMTYVI-IG 87

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+      +       L +         I +   +     +++ +  L    + L 
Sbjct: 88  GGIDLSIGSIVGLCGMIAGGLIAEGLRLPIFGIVIYFNVPMIILIVLLIGVLLGAVNGLI 147

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           I  L ++     +             +  +    F        +    FP       + +
Sbjct: 148 ITKLGVAPFIATL---GMLYMGRGFAMLRSGGKTFPNLIGNPALGNTGFPILGAGTMLGI 204

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
             V+     ++       ++T        +  N+ A       +   K++ F  S     
Sbjct: 205 PLVVWIAAVIAIIAAYVSQKTPFGRHIYAVGGNEDAAVLSGIRVNRLKMAIFMFSGFTAA 264

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVEL 297
           + G   A+     S      +  +  I+ V+L      GG  S+        IL  + + 
Sbjct: 265 LTGLVLASQL-VASHPATGEAYEMTAIAAVVLGGASLNGGRGSIGGTIIGALILGVLNDG 323

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTT 322
              +    F           +    
Sbjct: 324 LVMIGVSSFWQTAIKGMVLVLAVVI 348


>gi|293400320|ref|ZP_06644466.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306720|gb|EFE47963.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 293

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 91/289 (31%), Gaps = 11/289 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      I+ + A G ++V G + L++      Y +GAY      +  GL  +  + +
Sbjct: 8   LINGLSVGSIFALIALGYTMVYGIIKLINFAHGDIYMLGAYVGFFASTSLGLGFFPTMLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I    G+++   + K       I +LI +      L        G          + 
Sbjct: 68  AMVICMVAGVLIEKIAYKPLRHASRITSLITAIGVSLFLEYAMMYFMGPNIRTYPADFFP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        +  + +        + +    L  ++ L +++T I  A R +  +  
Sbjct: 128 REV----------YTFAGLQISNHQILIFVTSILLMIALQLIVKKTKIGKAMRAVSTDPD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG       + I P M      +      + GG+
Sbjct: 178 AAALMGINVNNTISFTFALGSALAGAAGVMIGMYYNSIDPLM-GMIPGLKAFIAAVFGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +         +  +  L  G  F      + +     +       + 
Sbjct: 237 GIIPGAMLGGEAIGILETLASGYGFSMIKDAVVYLILIVILIIKPSGLL 285


>gi|255746053|ref|ZP_05420000.1| ribose ABC transport system permease protein RbsC [Vibrio cholera
           CIRS 101]
 gi|255735807|gb|EET91205.1| ribose ABC transport system permease protein RbsC [Vibrio cholera
           CIRS 101]
          Length = 327

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALLFLVIVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +     +  +       +    +   + +                + F  
Sbjct: 88  LCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYL 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 196 L-----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLV 322


>gi|254455864|ref|ZP_05069293.1| ABC-type branched-chain amino acid transport system, permease
           protein II [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082866|gb|EDZ60292.1| ABC-type branched-chain amino acid transport system, permease
           protein II [Candidatus Pelagibacter sp. HTCC7211]
          Length = 349

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/334 (12%), Positives = 94/334 (28%), Gaps = 25/334 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +   +L+F          +   + I   + ++ A   +I  G +G  S   ++ Y +G
Sbjct: 5   LILYIGILIFGIAAPFIFPAFKVQLSIL-CVLIILATTWNIQGGEMGYNSFGNILFYGLG 63

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL-------PSLKFRGDYLAIATLIMS 130
            Y    +       +          +                         +A       
Sbjct: 64  MYLCASVQVGMFFPLAEWTESGGEKTFVHTPTQFFQGMAVGLIVAAVVPTIVAGLIGYSI 123

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
              +        +  G A   ++  +  +G         F    S      F Y++    
Sbjct: 124 LGLRGHYFAICTLGLGVAAGEISGGIEIIGAGQGFTTPPFPDVGSLESRGEFFYFLSFFT 183

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L+   +  +  T        IRDN+    ++    +  K+  + +S+ F G+AG    
Sbjct: 184 LVLTFIAVRSIYPTRFKLILNAIRDNEDKAEAMGIETMKYKIIGWMISAFFCGLAGGIMG 243

Query: 251 ASRDRISPDMFKFS---ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
                I      F      + ++ + ILGG  +L        +     E           
Sbjct: 244 GLVGYIDSTDVAFDGREMGVFMVLMAILGGKGTLWGPIIGATVFHIFKE----------- 292

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
               F   F       + + + ++++     ++ 
Sbjct: 293 ---GFWTFFLGWQYVALGVLIVVIVIYFPEGIMG 323


>gi|161505893|ref|YP_001573005.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|160867240|gb|ABX23863.1| hypothetical protein SARI_04072 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 308

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +++ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFIGAIIVASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWMVGSSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|170743765|ref|YP_001772420.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168198039|gb|ACA19986.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 290

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 54/307 (17%), Positives = 100/307 (32%), Gaps = 26/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I    Y +   GL+++ G + +++      Y +GAY   +  +  GL+ +L +P 
Sbjct: 8   LVNTLILGGTYALLGVGLTLIFGIMNVVNFTHGALYTVGAYLMYLAVAALGLNFFLALPA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +   A G ++ L  L+         T+++      +L      T G     V      
Sbjct: 68  AILGGLALGAVIELLLLRPLRGQDIDTTMLVMIGAGIVLQSGTLWTFGGVAKAVPSPFPE 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V       +VL G   L       + RT +  A R    +  
Sbjct: 128 AP-----------LRLGPVSVSWLSLFVLGGALLLIGLTYALINRTRLGLAMRAAFQDSD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +     + FA+ S+    AGA        +          +   +IVILGG+
Sbjct: 177 TAALMGVDVRGIYTATFALGSSLAAAAGALLGPV--YVVFPQMGQLAELKAFAIVILGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +++  A    IL    EL  G     +   + F             + +  V+L R   
Sbjct: 235 GNVTGAAIGGFILALAEELGAGYVSSGYRDAMGF-------------LIIIAVLLWRPTG 281

Query: 339 LLRLRTP 345
           L      
Sbjct: 282 LFAKAER 288


>gi|121586849|ref|ZP_01676630.1| ribose transport system permease protein RbsC [Vibrio cholerae
           2740-80]
 gi|121726989|ref|ZP_01680185.1| ribose transport system permease protein RbsC [Vibrio cholerae V52]
 gi|153817721|ref|ZP_01970388.1| ribose transport system permease protein RbsC [Vibrio cholerae NCTC
           8457]
 gi|153821641|ref|ZP_01974308.1| ribose transport system permease protein RbsC [Vibrio cholerae B33]
 gi|262162109|ref|ZP_06031124.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           INDRE 91/1]
 gi|262167064|ref|ZP_06034780.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           RC27]
 gi|121548892|gb|EAX58933.1| ribose transport system permease protein RbsC [Vibrio cholerae
           2740-80]
 gi|121630623|gb|EAX63012.1| ribose transport system permease protein RbsC [Vibrio cholerae V52]
 gi|126511763|gb|EAZ74357.1| ribose transport system permease protein RbsC [Vibrio cholerae NCTC
           8457]
 gi|126520838|gb|EAZ78061.1| ribose transport system permease protein RbsC [Vibrio cholerae B33]
 gi|262024519|gb|EEY43204.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           RC27]
 gi|262028184|gb|EEY46842.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           INDRE 91/1]
          Length = 327

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +     +  +       +    +   + +                + F  
Sbjct: 88  LCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYL 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 196 L-----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLV 322


>gi|222152611|ref|YP_002561786.1| branched-chain amino acid ABC transporter permease [Streptococcus
           uberis 0140J]
 gi|222113422|emb|CAR41101.1| branched-chain amino acid transport system permease protein
           [Streptococcus uberis 0140J]
          Length = 289

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 104/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      + +GA+    L + + L+ +L + +
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDLFMMGAFIGFYLINVFHLNFFLALVL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++   GM++   + +       IA LI +     +L        G         L  
Sbjct: 65  TMILTAILGMLIEFLAYRPLRHSTRIAALITAIGVSFLLEYGMVYLVGAEARAFPQALKT 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +            +    +        +L     L   +   +++T +  A R +  +  
Sbjct: 125 VK-----------YNLGPIAITNVQVIILTVSLLLMLGLQFIVKQTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG       + I+P M   +  I      +LGG+
Sbjct: 174 AAQLMGINVNSTISFTFALGSALAGAAGVLIGLYYNSINPLM-GMTPGIKAFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    I+  +                      +     ++   L +++L+R   
Sbjct: 233 GIIPGAALGGFIIGLLET-------------FSVSIGLSSYRDAIVYAVLIVILLIRPAG 279

Query: 339 LLR 341
           L  
Sbjct: 280 LFG 282


>gi|119871831|ref|YP_929838.1| inner-membrane translocator [Pyrobaculum islandicum DSM 4184]
 gi|119673239|gb|ABL87495.1| inner-membrane translocator [Pyrobaculum islandicum DSM 4184]
          Length = 323

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/327 (14%), Positives = 111/327 (33%), Gaps = 12/327 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V  L          S +      +   I  + A GL++   +  + +        +G 
Sbjct: 9   LIVILLAAGWLFSLIYSTRLAVDGVMYSSILALAAVGLTMTYITTKVPNFAHGAIMGVGT 68

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
            + + L  ++G+S ++   ++   S A  +++    +       +   L+M+ +  NI+I
Sbjct: 69  LTALALSQKFGISPYVAGLIALPFSIAISVVLYYTLMPIYKRGASPTILMMASMAYNIII 128

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                        +AD L  +               +   +        L +   SA + 
Sbjct: 129 LGAL-------NAIADYLGRIWGIFTRGYTLRSMDFNIGDFPGLAIIGPLSVALTSAVLY 181

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           ++L +T +  A R   +N++   SL   +  A L A+ ++    G +GA           
Sbjct: 182 IFLVKTKLGIALRAAVENEELARSLGIDVDRAYLVAWIIAGVLAGYSGAVLTLYLSV--E 239

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
               +     + +  I GG++++         +  V      +  Y  + +         
Sbjct: 240 PDTGWMILANIFAASIAGGLSNIFGAVLGAFFMGFVE---VPLATYIASIVAIEPYVVLQ 296

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345
               L +IA+ L +++    L  LR  
Sbjct: 297 YRPLLPLIAVALFLIIIPQGLTSLRRR 323


>gi|119386636|ref|YP_917691.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119377231|gb|ABL71995.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 333

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 83/309 (26%), Gaps = 16/309 (5%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI---------WLLIPVS 99
             + A G++++ G L   +       A GA   +++                  L +P  
Sbjct: 25  LALGALGVTLIYGILRFSNFAHGDTMAFGAALVILITWGLQSIGVSLGPLPTALLALPFG 84

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             ++    +       +F     +   +++      + I             +       
Sbjct: 85  IALTAVFILGTDRVVYRFYRSKRSAPIILVMASVGVMFIMNGLTRLIIGVDEIRFDDGAR 144

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                   R +   S  +   +     L+       ++  +L R+    A R   DN+  
Sbjct: 145 FLITVQQFRAWTGLSEGLSLRVSQALTLVVTALACWALFRFLNRSRAGKAMRAYSDNEDL 204

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                          + +++A    AG  +   +         F   + + +  I+GG+ 
Sbjct: 205 ALLSGIDPERVVRLTWIIATALAVTAGTLYGLDKSF--KVFNYFQILLPIFAAAIVGGLG 262

Query: 280 SLSKIAKATAILIGVVELCCG-----MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +         I+                +  F                +  + L +V+L 
Sbjct: 263 NPLGAVAGGFIVAFSEVAVTYPWRKIATYLGFQPDGLLQLLSTEYKFAVSFVILIVVLLF 322

Query: 335 RSHSLLRLR 343
           R   L R +
Sbjct: 323 RPTGLFRGK 331


>gi|206577952|ref|YP_002236178.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Klebsiella pneumoniae 342]
 gi|288933165|ref|YP_003437224.1| inner-membrane translocator [Klebsiella variicola At-22]
 gi|206567010|gb|ACI08786.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Klebsiella pneumoniae 342]
 gi|288887894|gb|ADC56212.1| inner-membrane translocator [Klebsiella variicola At-22]
          Length = 308

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 98/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTQGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            S           + +       ++ L++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWIVGHSDSFSATITTMQLVIWVVTFIAMLALTLFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|39934062|ref|NP_946338.1| branched chain amino acid ABC transporter permease
           [Rhodopseudomonas palustris CGA009]
 gi|39647910|emb|CAE26430.1| possible branched-chain amino acid ABC transporter, permease
           protein [Rhodopseudomonas palustris CGA009]
          Length = 332

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 103/288 (35%), Gaps = 12/288 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   ++  L            +  I+++        L +V G  G+ +L     + +GA
Sbjct: 20  LIAAAVIAVLGAIGYFVYPDDLAFLIRVIGLAFLVISLDLVTGYCGVATLGHAALFGVGA 79

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+             L++ + A+   A G++ GL   +FRG    + ++   ++   +  
Sbjct: 80  YAAGNFCLAGVTDPILMLLIGALAGTATGLVSGLLVTRFRGLPQLVLSIAFGQLVAALAN 139

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           K   IT G  G+         G              +F ++    Y   + +  ++   +
Sbjct: 140 KLSSITGGSDGLAGISPSPVFGI------------FNFDMFGRTGYVFSVIVLLVTMVTL 187

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           L   R+  +   R I+D+      +  ++    +  + V+ A  G+ GA  A +   +  
Sbjct: 188 LRFARSPFALLCRAIKDDTLRTRMIGVSVYPRLVVMYCVAGAVAGLGGALTAINTGVVGL 247

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           D   F  +   + ++ILGG  +L        +           + +++
Sbjct: 248 DSVSFERSAEALIMLILGGAGNLWGALIGAILFELFHHYVSTASPFHW 295


>gi|313647245|gb|EFS11697.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Shigella flexneri 2a str. 2457T]
          Length = 300

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 4   MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 63

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 64  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 120

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 121 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 176

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 177 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYCVINPY-IGFMAGMKAF 235

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 236 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 282

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 283 VLLVMPTGILGR 294


>gi|262273949|ref|ZP_06051761.1| ribose ABC transport system permease protein RbsC [Grimontia
           hollisae CIP 101886]
 gi|262221759|gb|EEY73072.1| ribose ABC transport system permease protein RbsC [Grimontia
           hollisae CIP 101886]
          Length = 326

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 88/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  I  + A G+++V+ + G + L+     A
Sbjct: 28  LIALLFLIVVVSFLNPNFFTVDNILNILRQTSINAIIAVGMTLVILTAG-IDLSVGSVLA 86

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +     +  +       +    +   + +                + F  
Sbjct: 87  LCGAFAATLIAMEVPVLVAVPTALFAGAALGAISGIIIAK------------GKVQAFIA 134

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F        Y + +   +  M  + A
Sbjct: 135 TLVTMTLLRGVTMVYTEGRPISTGFTDTADAFAWFG-----TGYALGIPVPVWMMVVVFA 189

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           ++   L  T        +  N+ A       +   K+ A+A+      +AG    +    
Sbjct: 190 AVWYLLNHTRFGRYIYAVGGNESATRLSGIDVDKVKIGAYAICGLLAALAGIIVTSRLSS 249

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 250 AQPTAGMGYELDAIAAVVLGGTSLMGGKGHIMGTLIGALIIGFLNNALNLLDVSSYYQMI 309

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 310 AKATVILAAVMV 321


>gi|313891245|ref|ZP_07824863.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120312|gb|EFR43433.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pseudoporcinus SPIN 20026]
          Length = 289

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 107/303 (35%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      + +GA+    L + + L++++ + +
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDLFMMGAFIGYYLINVFHLNLFVALLL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   GM++   + +       IA LI +     +L        G         L  
Sbjct: 65  TMVFTACLGMLIEFLAYRPLRHSTRIAALITAIGVSFLLEYGMVYLVGAEARAFPQALKT 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +            +    V        +LL    L   +   +++T +  A R +  +  
Sbjct: 125 VK-----------YSLGPVSISNVQMIILLVSILLMIGLQFVVKQTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG       + I+P M   +  I      +LGG+
Sbjct: 174 AAQLMGINVNSTISFTFALGSALAGAAGVLIGLYYNSINPLM-GMTPGIKAFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +  +                  F+     ++   L  ++L+R   
Sbjct: 233 GIIPGAALGGFMIGLIETI-------------SVSIGFSSYRDAMVYAVLIQILLIRPAG 279

Query: 339 LLR 341
           LL 
Sbjct: 280 LLG 282


>gi|291619272|ref|YP_003522014.1| LivH [Pantoea ananatis LMG 20103]
 gi|291154302|gb|ADD78886.1| LivH [Pantoea ananatis LMG 20103]
          Length = 308

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMVIAALMMMGIDTSWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
                    +I+                     +   I  I           +    R  
Sbjct: 72  MIAAGFVIAVIISSAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + +                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLITGQWTLGESNGFAATLSTMQLVIWVVTFLTMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +AG         I+     F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGSIN-PFIGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L     L        +  ++ F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|170745118|ref|YP_001766575.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
 gi|170658719|gb|ACB27773.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
          Length = 290

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 54/307 (17%), Positives = 100/307 (32%), Gaps = 26/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I    Y +   GL+++ G + +++      Y +GAY   +  +  GL+ +L +PV
Sbjct: 8   LVNALILGGTYALLGIGLTLIFGIMNVVNFTHGALYTVGAYVMYLAVAALGLNFFLALPV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G  + L  L+         T+++      +L      T G     +      
Sbjct: 68  AILGGLLLGAAIELLLLRPFRGSDIDTTMLVMIGAGIVLQSGTLWTFGGVAKAIPSPFPE 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V             V       +VL     L A     + RT +  A R    +  
Sbjct: 128 APLQV-----------GPVSVSWLRLFVLGAALTLIALTYALINRTKLGLAMRAAFQDSD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +     + FA+ S+    AGA        +          +   +IVILGG+
Sbjct: 177 TAALMGVDVRRIYTATFALGSSLAAAAGALLGPV--YVVFPQMGGLAELKAFAIVILGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +++  A    IL    EL  G     +   + F             + +  V+L R   
Sbjct: 235 GNVTGAAIGGFILALAEELGAGYVSSGYRDAMGF-------------LIIIAVLLYRPTG 281

Query: 339 LLRLRTP 345
           L      
Sbjct: 282 LFAKAER 288


>gi|39935479|ref|NP_947755.1| ABC transporter permease [Rhodopseudomonas palustris CGA009]
 gi|192291045|ref|YP_001991650.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|39649331|emb|CAE27853.1| possible permease of ABC transporter [Rhodopseudomonas palustris
           CGA009]
 gi|192284794|gb|ACF01175.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 354

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 96/287 (33%), Gaps = 3/287 (1%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V    L+        S  Y         ++V  A  L ++ G  G LS      + I  Y
Sbjct: 26  VFVLALVGALAYPMFSDGYTVGNTAYFFVWVFIALSLCLIWGYGGALSFGQTAFFGIAGY 85

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI-MSEIFQNILI 138
           SY IL   +G +    +           ++  L         +    L  ++     +L 
Sbjct: 86  SYGILTLNFGAAYGFTLVALLAAVAIAAVVALLLGYFMFFGRIEGVFLGIVTLAVTLMLE 145

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE--IFMYYVLLGMCFLSAS 196
           ++   T G      A RL               +    ++    + +YY++L +  +   
Sbjct: 146 RFMAQTAGPEWRIGAARLNGFNGMSGMPPITIPWFDGPIVLFADVGLYYLILALVVVVYL 205

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L  ++  N    IR+N +    L   I   +L  F + +   G++G  + A    I
Sbjct: 206 GLRILVNSSFGNVIVAIRENPERAEMLGYDIRKYQLINFVIGAGLAGLSGVLYTAWGQYI 265

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           +P     +   + +  V +GG + L+     T +++   +       
Sbjct: 266 TPSSMGMTSAALPLIWVAVGGRSDLTSTLVGTLVVLAGFQALTIYGS 312


>gi|145591711|ref|YP_001153713.1| inner-membrane translocator [Pyrobaculum arsenaticum DSM 13514]
 gi|145283479|gb|ABP51061.1| inner-membrane translocator [Pyrobaculum arsenaticum DSM 13514]
          Length = 371

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 58/369 (15%), Positives = 117/369 (31%), Gaps = 48/369 (13%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +    +  +       Q Y+ +  + + IY++    L++  G  G+ +   V+  
Sbjct: 4   FVGLIIYALSVAAVAAAGRDVQSYLLTTIVDVAIYLIITLSLNLEAGIGGIPNFGRVLTV 63

Query: 75  AIGAYSYV-------------------------------ILGSRYGLSIWLLIPVSAMIS 103
           A GAY                                  +        + L + +S  + 
Sbjct: 64  AFGAYMAGGVIGRIALWAKGMSYDYIYDNAAAVSALSKSMTAVDAAAMLALGVAISIAVG 123

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
            + G+I  LP+ +   DYLAI  L   ++   I + ++P+  G  G+             
Sbjct: 124 ASLGLIASLPARRLSADYLAITLLAFGDVAYYIGLNYEPLVGGTLGVSAPP--------- 174

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                + +      +  I    V  G   L   +I  L ++      R  R++ +    L
Sbjct: 175 ----IYEKLFGGGTMRLIGAVAVSAGAALLVYLLIQRLSQSPFGRILRIHREDPELVSVL 230

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK-FSENIIVISIVILGGMTSLS 282
                + +    A+  A   +AG  +A     + P  F+  +       I+ILGGM +  
Sbjct: 231 GRDPAYIRAWTMAIGGAVSAVAGLLYALYAGAVHPRGFERINFTFYPWLIMILGGMGNNL 290

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +     I + +      ++ + +                L      LVI +    L+  
Sbjct: 291 GVVNGVFIFVVI---YRILDIFKYEIGNAVGFDPVWLGYMLFGGLAMLVIALAPRGLVPE 347

Query: 343 RTPSNFLER 351
           +       R
Sbjct: 348 KAEPVVGGR 356


>gi|90022615|ref|YP_528442.1| branched-chain amino acid ABC transporter permease [Saccharophagus
           degradans 2-40]
 gi|89952215|gb|ABD82230.1| inner-membrane translocator [Saccharophagus degradans 2-40]
          Length = 383

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/343 (11%), Positives = 87/343 (25%), Gaps = 36/343 (10%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +    L L +       +  ++  + L Y   A  L ++ G  G LSL   I + +G Y+
Sbjct: 19  LILAALILVVFPVCLDLFRLNLVGKYLTYAFAAVSLVLLWGYGGTLSLGQGIFFGLGGYA 78

Query: 81  YVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
             +                       +            +     +       +      
Sbjct: 79  MAMFLKLEASSPENTAIQSTPGIPDFMDWNQLTELPWFWVPFNSLTFTILAILIVPTVFA 138

Query: 129 MSEIFQNILIKWKPITNGKAGIYVA----------DRLYFLGTTVRSLIRFFRFPSSFVI 178
                     +   +        VA                   +  L     +  +   
Sbjct: 139 YVIGAAMFKRRVGGVYFAIITQVVAVILTVLIVGQQGFTGGINGITDLRTLNGWDITSDS 198

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
            +   Y++   +      +  ++  +        +RD +         +   K+  F ++
Sbjct: 199 AKYIFYFLNCFLLLGVIMLGRFILTSKFGRLLLAMRDKEDRVRFSGYDVSNFKIFIFCIA 258

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           +    + GA F      +SP       +I ++    +GG  SL      T ++       
Sbjct: 259 ALMSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIFCAIGGRMSLIGAVYGTLLINF----- 313

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                        F  SF      LM      V++   + L  
Sbjct: 314 ---------GKTAFSESFPQLWLFLMGGLFIAVVMFFPNGLAG 347


>gi|149201135|ref|ZP_01878110.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. TM1035]
 gi|149145468|gb|EDM33494.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. TM1035]
          Length = 394

 Score = 72.2 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/362 (13%), Positives = 97/362 (26%), Gaps = 36/362 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L  +   +L    G       +  +    L   + A  + +V G  G+LSL     + 
Sbjct: 26  LALFTLGVTVLSEGFGIALLSTSMVKILGMTLCLCLIAVAMDVVWGYCGILSLGHFAFFG 85

Query: 76  IGAYSYVILGSRYGLSIWLL-------------------------------IPVSAMISG 104
           +G Y+  +          ++                               +P     + 
Sbjct: 86  LGGYAIGMWLMYARTQGIVVESLSAAPIPPTQSEVQNAIASQIFGVVGSNELPWLWGFAH 145

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
           +  + + +  L      L    L        + +         A      +         
Sbjct: 146 SLTLQLLMVLLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLYLFQNDTGLRGNN 205

Query: 165 SLIRFFRFPSSF----VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
            L      P           ++ ++       L   +  WL      +  R IRDN+   
Sbjct: 206 GLSGLQNIPGLDHVPQSTLSLWFFWASALALGLGYLLFAWLVSAKFGSVIRAIRDNEARV 265

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             L   +   KL  F +++    +AGA +      I+P       +I +   V +GG   
Sbjct: 266 RFLGYDVESYKLVIFTLTAVVSAIAGALYYPQAGIINPAEIAPIASIYLAVWVAIGGRGR 325

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L       A++        G      N    +  ++      L+ +    V L     + 
Sbjct: 326 LYGAVIGAAVVSLASSWFTGGGAPNINLGF-YTINWTDWWLVLLGLGFVAVTLFFPRGIG 384

Query: 341 RL 342
            L
Sbjct: 385 GL 386


>gi|224371731|ref|YP_002605895.1| ABC-type branched-chain amino acid transport-system, permease
           component [Desulfobacterium autotrophicum HRM2]
 gi|223694448|gb|ACN17731.1| ABC-type branched-chain amino acid transport-system, permease
           component [Desulfobacterium autotrophicum HRM2]
          Length = 291

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 93/290 (32%), Gaps = 13/290 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ S      +Y + A GLS++  S  L++         GA   V L  +  L + L  
Sbjct: 6   QYLFSGITIGAVYAVVAIGLSMLYRSTELINFAHGEFAMFGALGLVTLWGQLHLPLPLAF 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +S       GM+    +L+   D   I  +I++     +         GK  + +    
Sbjct: 66  VLSVTGVACVGMVFERFALRPVKDPNPITLVIITVGASIVFRGIAMNVWGKDPVSLPP-- 123

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             +  +      Y++     L+ ++ L+ R T    A      N
Sbjct: 124 ---------FSDLESIEIAGAVIVPQSLYIVGAALVLAGTLHLFFRYTIQGKAMTACAVN 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +KA +          L A  +S+    +AG F A      +         +      ++G
Sbjct: 175 KKAAWLTGIPSERMGLFAVLISAVSGAVAGIFIAPVTM--NTYDMGTMLGLKGFCAAMIG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           G+ SL        +L  +  L  G+        + F     + +     +
Sbjct: 233 GLGSLWGAFAGGILLGVLESLGAGLISSGSKDAIAFVLLLLILYLCPGGL 282


>gi|295097054|emb|CBK86144.1| L-leucine ABC transporter membrane protein/L-isoleucine ABC
           transporter membrane protein/L-valine ABC transporter
           membrane protein [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 308

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDSSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +       +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ L++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWIVGASENFSATITTMQLVIWVVTFIAMLALTLFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|297566968|ref|YP_003685940.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
 gi|296851417|gb|ADH64432.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
          Length = 306

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 105/290 (36%), Gaps = 31/290 (10%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
           FA  L +++G +GLLS      +   AY+  +L         L +     ++      +G
Sbjct: 32  FAMALDLLLGYVGLLSFGHAAFWGTSAYTSALLAKAGLP-FPLAVLGGVGVTTLLATAIG 90

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
             S++ +G Y A+ TL  +++   I  + + +T G+ G+    R  +             
Sbjct: 91  FLSIRRQGIYFAMVTLAFAQMVYYIANELRSLTGGENGVQGVPRTLW------------- 137

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                +   +  YY  L +  L   +     R+   +    +R+ +    +L       K
Sbjct: 138 --GLDLSNPLAFYYAALPLVALGFFLAWRTVRSPFGHVLIAVREEEARAQALGYPTTRFK 195

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F +S+    +AG  +A +   ++ ++  +S + +V+ + ILGG+ +L          
Sbjct: 196 FLDFLLSAGLSALAGGLYALNHGFVALEVVHWSTSGLVVMMAILGGIGTLW--------- 246

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                    +       L  +  ++         I   LV+L     +  
Sbjct: 247 ------GGLLGAAVVLLLRDWLSAWTDAWGVATGIIFVLVVLGFRQGIWG 290


>gi|91788438|ref|YP_549390.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91697663|gb|ABE44492.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas sp. JS666]
          Length = 430

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 113/331 (34%), Gaps = 32/331 (9%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            L      L+        +     ++  Q+ I ++     +I++G  G+LS    +   +
Sbjct: 16  FLLWSLFALVLALAPLVFTSSLSHTILSQMGIAIIVCLSYNILLGQGGMLSFGHAVYSGM 75

Query: 77  GAYS-----YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           G++        I     G+ + L+     + S    +++G  + K  G   A+ TL + E
Sbjct: 76  GSFLAIHTLNKISSGALGVPVSLIPIAGGLASMLVAVVLGWVTTKKSGTTFAMITLGVGE 135

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +   + + +     G+ G+              + +   +        ++ +YY++    
Sbjct: 136 LIWAMSLMFPEFFGGEGGVS------------GNRVTGAKVWGITYGPQVQLYYLIAAYT 183

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +  +++    RT +      +RDN +    +       +  +F V++ F G++G   A 
Sbjct: 184 LVCTALMFAFTRTPLGRMLNAVRDNPERVEFVGYDTQKVRYFSFIVAAFFAGISGGLAAL 243

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           + + ++ ++     +   +    LGG T          +++    L       +      
Sbjct: 244 NFEIVTSEVVSGYRSGAYLLFTFLGGATFFFGPIIGAVLMVLAFVLLSEFTKAW------ 297

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                       + +    +++     +  L
Sbjct: 298 ---------LLYLGLIFLFMVMYAPGGVASL 319


>gi|296105145|ref|YP_003615291.1| branched-chain amino acid transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295059604|gb|ADF64342.1| branched-chain amino acid transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 308

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDSSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +       +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ L++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWIVGASENFSASITTMQLVIWVVTFIAMLALTLFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|257784624|ref|YP_003179841.1| Monosaccharide-transporting ATPase [Atopobium parvulum DSM 20469]
 gi|257473131|gb|ACV51250.1| Monosaccharide-transporting ATPase [Atopobium parvulum DSM 20469]
          Length = 551

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/298 (9%), Positives = 81/298 (27%), Gaps = 9/298 (3%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y  IL +   +  +   +      +   + ++  Q    +  A G++ ++   G   L+ 
Sbjct: 228 YIVILLVFIALCIITPAVKGTQLLTYSNVINILQQASPRMFLALGVAGLILLTG-TDLSI 286

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +G  +  I+  +   +  +      +      +   +         L      ++
Sbjct: 287 GRMVGMGMTASTIIMHQGINTGQVFGITFDLTGVPIPVR--IIMALVTCIVLCTCFTSIA 344

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             F         I+     + +   + +    V         P   +        ++L  
Sbjct: 345 GFFTAKFKMHPFISTMANMLIIFGIVTYATKGVSFGAIEPSIPDMVIPRIGKFPSIILWA 404

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
               A +     +T        +  N +A      ++    + AF ++    G       
Sbjct: 405 IAAIAIVWFIWNKTTFGKNLYAVGGNPEAAAVSGISVFRVMVGAFVMAGILYGFGSWLEC 464

Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMN 302
                     +    ++  I+  ++      GG+  +S +     I   +      + 
Sbjct: 465 MRMVGSGSAAYGQGWDMDAIAACVVGGVSFTGGIGKISGVTTGVLIFTALTYALTILG 522


>gi|152972327|ref|YP_001337473.1| branched-chain amino acid transporter permease subunit LivH
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|150957176|gb|ABR79206.1| high-affinity branched-chain amino acid transport protein (ABC
           superfamily, membrane) [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 308

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 98/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALIMMGIDTSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTQGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            S           + +       ++ L++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWVVGHSDSFSATITTMQLVIWVVTFIAMLALTLFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|223933325|ref|ZP_03625313.1| inner-membrane translocator [Streptococcus suis 89/1591]
 gi|330833174|ref|YP_004401999.1| inner-membrane translocator [Streptococcus suis ST3]
 gi|223897975|gb|EEF64348.1| inner-membrane translocator [Streptococcus suis 89/1591]
 gi|329307397|gb|AEB81813.1| inner-membrane translocator [Streptococcus suis ST3]
          Length = 295

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 100/303 (33%), Gaps = 19/303 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L +      ++    
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDLYMMGAFMGYFLLNNLN---FIADGG 61

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +         ++G   L    ++LA   L  S     ++         +    +      
Sbjct: 62  TRFFVALILAMVGTAILGVVIEFLAYRPLRNSTRIAALITAIGVSFFLE--YTMIKFFTA 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    F    V        +L     L  ++ L ++RT +  A R +  +  
Sbjct: 120 DVKAFPQAIEAVTFNLGPVSVTNIQLIILGVSLALMVALQLIVKRTKMGKAMRAVSVDSD 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG       ++I P M   +  +      +LGG+
Sbjct: 180 AAQLMGINVNRTISFTFALGSALAGAAGVLLGLYYNQIEPLM-GMTPGLKAFVAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                 +   F+     ++   L +++L+R   
Sbjct: 239 GIIPGAALGGFVIGIIET-------------FTYVIEFDTFRDAIVYTVLIIILLVRPSG 285

Query: 339 LLR 341
           +L 
Sbjct: 286 ILG 288


>gi|322369206|ref|ZP_08043771.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haladaptatus
           paucihalophilus DX253]
 gi|320550938|gb|EFW92587.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haladaptatus
           paucihalophilus DX253]
          Length = 298

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 91/311 (29%), Gaps = 33/311 (10%)

Query: 51  MFAWGLSIVVGSLGLLSLNCVIAYAIGAYS-----------------YVILGSRYGLSIW 93
           M A GLSI++G+L  ++      Y IG Y                  +        L   
Sbjct: 1   MVAIGLSIILGTLKFVNFAHGALYLIGTYLGLLITLNITISDGKLAEWGYGQVGLDLGFL 60

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + +  +I    G++M     +   D      ++++     ++ +   I  G      A
Sbjct: 61  PALVIVPIIVFGVGLLMERFIARPFYDRPDTDQILLTFGLAIVVQEAFKILFGGQSYNFA 120

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                   ++   +             I+  YV+     L A + L +  T      R  
Sbjct: 121 RPAQTSLGSIELQLSGPIDLPLVGTIGIWRLYVIAITAVLVALVYLLIEYTDFGLVVRAG 180

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             + +    L   I    L  F V +A  G+AG                    +    +V
Sbjct: 181 TRDAEMVRLLGVKITRPYLMVFGVGAALAGIAGVVGGTL--YAVNPNIGMEVLVPSFLVV 238

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ++GG+ S+        ++   +     +   +                  + +   +++L
Sbjct: 239 VIGGVGSIRGAVVGGILIGLTLSSLVAVAPQWSQVG--------------IYVLAAIILL 284

Query: 334 MRSHSLLRLRT 344
            R   LL    
Sbjct: 285 ARPQGLLGSEE 295


>gi|330876828|gb|EGH10977.1| inner-membrane translocator [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
 gi|330963605|gb|EGH63865.1| inner-membrane translocator [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 300

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 92/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+ A GL+IV G +G++++      A+G+Y+  +    +      L+    +I
Sbjct: 14  FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYATYVTSLVFQRYCPELMGWYFII 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 ++                 + +     +L  W      +           +   
Sbjct: 74  GIGVAFLVTFAFGFMLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 131

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               ++     S  +   +   +++     ++A + L+L R+      R +  N+    +
Sbjct: 132 TVQWLQGAWKVSEGLELPLNRIFIIGLTFVIAAGVFLFLYRSRWGLRIRAVTQNRAMAGA 191

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     G+AG+ F       +  +      +    +V+ GG+ SL 
Sbjct: 192 AGINTARVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 249

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +         +        +               + + +++  R + L   
Sbjct: 250 GTFLSAFAIGQTQISLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 296

Query: 343 R 343
           +
Sbjct: 297 K 297


>gi|153212871|ref|ZP_01948488.1| ribose transport system permease protein RbsC [Vibrio cholerae
           1587]
 gi|153825735|ref|ZP_01978402.1| ribose transport system permease protein RbsC [Vibrio cholerae
           MZO-2]
 gi|153830423|ref|ZP_01983090.1| ribose transport system permease protein RbsC [Vibrio cholerae
           623-39]
 gi|183179638|ref|ZP_02957849.1| ribose transport system permease protein RbsC [Vibrio cholerae
           MZO-3]
 gi|262190076|ref|ZP_06048370.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           CT 5369-93]
 gi|124116249|gb|EAY35069.1| ribose transport system permease protein RbsC [Vibrio cholerae
           1587]
 gi|148874097|gb|EDL72232.1| ribose transport system permease protein RbsC [Vibrio cholerae
           623-39]
 gi|149740574|gb|EDM54685.1| ribose transport system permease protein RbsC [Vibrio cholerae
           MZO-2]
 gi|183013049|gb|EDT88349.1| ribose transport system permease protein RbsC [Vibrio cholerae
           MZO-3]
 gi|262034041|gb|EEY52487.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           CT 5369-93]
          Length = 327

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +     +  +       +    +   + +                + F  
Sbjct: 88  LCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYALGIPVPVWLMVVVFAGAWYL 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 196 L-----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLV 322


>gi|319763649|ref|YP_004127586.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|330824086|ref|YP_004387389.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317118210|gb|ADV00699.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|329309458|gb|AEB83873.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 305

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 59/330 (17%), Positives = 122/330 (36%), Gaps = 37/330 (11%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  +   L         Y+ S+ + + +    A  L  V+  +G L+      Y +GAY 
Sbjct: 10  IAAIGCVLLACVALGSGYVGSLMVWMALAAALAASLRFVL-LIGELNFASAAFYGLGAYC 68

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
              + +         + +S++++ A  ++ G  +LK +G Y  +     +E  + +  + 
Sbjct: 69  TGTIANTADWPFAATLALSSLLALAVSIVFGGITLKVKGPYFLLIGFAFTEAMRILYTRT 128

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +  G +G+       +L    +                    Y    +CF     +L 
Sbjct: 129 EAL-GGNSGLVGIFPPAWLDPYYQ--------------------YFATALCFALILGMLA 167

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           + R+ +   +  IRDN+    S+   +  AK++ FA++SA  G+ G+  A + + ISP  
Sbjct: 168 IERSHLGKIFVAIRDNENVVRSVGNRVFLAKVACFAIASAVAGLVGSLHAYANNVISPLD 227

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F F  +   ++ + +GG  S         +L+G+      M                   
Sbjct: 228 FGFMLSTFALAYLKVGGEDSPLGPVIGAVLLVGIASWAQSMGGS---------------E 272

Query: 321 TTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
             L  +A+ L +L     L+ L        
Sbjct: 273 HILYGLAIVLSVLFMPKGLMGLLERLRAGR 302


>gi|262403323|ref|ZP_06079883.1| ribose ABC transport system permease protein RbsC [Vibrio sp.
           RC586]
 gi|262350822|gb|EEY99955.1| ribose ABC transport system permease protein RbsC [Vibrio sp.
           RC586]
          Length = 327

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +     +  +       +    +   + +                + F  
Sbjct: 88  LCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADNFAWFGTGYALGIPVPVWLMVVVFAGAWYL 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 196 L-----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLV 322


>gi|226355572|ref|YP_002785312.1| branched-chain amino acid ABC transporter permease [Deinococcus
           deserti VCD115]
 gi|226317562|gb|ACO45558.1| putative branched-chain amino acid ABC transporter, permease
           component [Deinococcus deserti VCD115]
          Length = 324

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/327 (14%), Positives = 104/327 (31%), Gaps = 39/327 (11%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS----- 91
           +   +      +Y +FA G ++V   LG+++      + +GAY    L      +     
Sbjct: 8   QNTMNGLAIGSVYAIFALGYTLVFSILGIINFAHGAVFTLGAYFTYTLVVGQFENNGLLK 67

Query: 92  -----------------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
                              L   + A+++G   +++   + +      A   L +     
Sbjct: 68  GINLFPDGSPFSGSALSFGLATLIGAVLAGLVAVLIERLAFRPMRARGADPLLALVSSLG 127

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+    I                G    +L       +  V+       + L    + 
Sbjct: 128 VALVLVNLIQLLVGAEIYNFPSNAYGEVKPALAFQIGDKT--VVIRTVQIIIFLVSLVML 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A +   + RT I  A R + +N      L  ++    L  F +S    G+AG     +  
Sbjct: 186 AILGYVIGRTKIGKALRAVAENPGTASLLGISVDRFILITFFLSGFLGGLAGTLVGTAFG 245

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++   F  +  +  +++++LGG+ S+        ++                       
Sbjct: 246 -VAGPYFGVTYGLKGLAVIVLGGLGSIPGAVLGGLVIGLAEAFV--------------PA 290

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
            ++     +    LF+++L+R   LL 
Sbjct: 291 DYSAYKDAVAFALLFVILLVRPQGLLG 317


>gi|159030125|emb|CAO91017.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 287

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 89/292 (30%), Gaps = 12/292 (4%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
           + + + +      I  + A GL++  G L L +        +GAY   ++ ++       
Sbjct: 3   TPQLLFNGLAVGSIIALAAVGLTLTCGILRLSNFAHGDFMTLGAYITWLVNAQGINLWLA 62

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
           +   +A+ + A  +   L     R       TLI+  I   + ++   +          D
Sbjct: 63  MPVGAAVTAIAMLIAERLLWKPMRDRRADSTTLIIISIGLALFLRNGILMIWGGSNQRYD 122

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                 T               +        V+     +  ++   L++T I  A R + 
Sbjct: 123 LPVMTAT-----------EIFGIKVAFDRLLVIGLAIIVIIALHFLLQKTKIGKAMRAVA 171

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           D+          + +     + ++     +AG  F      +      +   + + + VI
Sbjct: 172 DSNDLARVTGINVEWVVFWTWIITGVLTALAGGMFGLITGGV-RPNMGWFLILPMFAAVI 230

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           LGG+ +         I+    E+   +    +   +       +       +
Sbjct: 231 LGGIGNPYGAIAGALIIGVAQEISVPLIGSDYKLAVALLIMILLLLFRPQGL 282


>gi|311109814|ref|YP_003982665.1| inner-membrane translocator 75 [Achromobacter xylosoxidans A8]
 gi|310764503|gb|ADP19950.1| inner-membrane translocator 75 [Achromobacter xylosoxidans A8]
          Length = 314

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 56/328 (17%), Positives = 117/328 (35%), Gaps = 37/328 (11%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L   AVV   L+ L     +      S+ + + + V+       V   +G L+       
Sbjct: 5   LLTPAVVSVGLVALAASLLQGGGLAASLVLWLAVNVLITASFRFVT-LIGELNFAVAGFV 63

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY   +    +     + +  SA+ +G   ++ G  +L+ +G Y  + +   +E+ +
Sbjct: 64  GLGAYMAGVGSVSFNWPFLVTLAASAVFAGLISLVFGYITLRAKGPYFMLISFAFTEVIR 123

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I  K + I  G +G+       +L                          +++ +    
Sbjct: 124 MIYTKTEAI-GGSSGMVGIFPPSYLDGYFP--------------------ALVVAVVLAL 162

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              + ++ ++        IR+N     ++   +   K+    VSS   G+AGA  A S +
Sbjct: 163 LWALWFIEKSDFGKVLVAIRNNDALVETVGINVHLTKVLCLGVSSFVAGIAGALLAYSNN 222

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ISP  F F   +  ++ + +GG + +        +L  +                +F  
Sbjct: 223 VISPGDFGFLLAVYALAYLKVGGESHILGAVVGAIVLTLL---------------GQFAL 267

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
           SF          A+ + +L+    L+ L
Sbjct: 268 SFGPYEHIFYGAAIVISVLLMPGGLIGL 295


>gi|239623304|ref|ZP_04666335.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522270|gb|EEQ62136.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 333

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 90/313 (28%), Gaps = 26/313 (8%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
               + I +      +Y + A G++++ G + +++        +G Y      +  G   
Sbjct: 45  WYFTQNIFNGIFAGGVYALIAVGITVIYGVMRMINFASGAYLMVGMYITYFGYTLTGWDA 104

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           +LLIP + ++S A        ++    +      +I++            +  G      
Sbjct: 105 YLLIPFTVLVSAAVAWASFKLTISPILNRDKTTAIIVTVGLSFFFQNLVILIFGAN---- 160

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                    T+ + I+         I  +           L     + L +T    A R 
Sbjct: 161 -------PLTIPTEIQLKSLMIGPFIINLPRLIAFAASMALVLIFHILLNKTMFGQAIRA 213

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
             +N +    L          A+ +      +AG          S     F      +  
Sbjct: 214 TSENVEVSEMLGVNTRNMFAIAWVLGIVLTSIAGLLLTPIYAIQSSTGATFRTTG--LMA 271

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           V+LGG+  +     +  +L  +  L          SL              + + L LV+
Sbjct: 272 VVLGGLGDIRGAFLSGILLGVIEALVASYIDTNMGSLG-------------IFVLLLLVL 318

Query: 333 LMRSHSLLRLRTP 345
             R   L      
Sbjct: 319 YARPAGLFGKGER 331


>gi|84500966|ref|ZP_00999201.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
 gi|84391033|gb|EAQ03451.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
          Length = 337

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/334 (9%), Positives = 85/334 (25%), Gaps = 19/334 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L      +   I           + A G++++ G L   +       A G  + ++   
Sbjct: 4   MLNALVALANFVIVPALAYGSQLALGALGVTMIYGILRFSNFAHGDTMAFGTMAVILFTW 63

Query: 87  RYGLSIW-LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
            +           +A+++   G+++ +  +     Y+             ++I    +  
Sbjct: 64  LFQSWGISFGPLPTALLALPFGIVICMALVLLTDRYVYAFYRAQKVKPVVLVIVSMGVMF 123

Query: 146 GKAGIYVADRLYFLGTTVRSLIRF--------FRFPSSFVIYEIFMYYVLLGMCFLSASI 197
              G+                                  +  +      L+      A +
Sbjct: 124 VTNGLVRLIIGPDDQRFSDGERFLISARDFKEMTGLDEGLAIKTGQALTLVVAIIAVALL 183

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L RT    + R   DN+              +  + + +    +AG  +   +    
Sbjct: 184 FWFLNRTRTGKSMRAYSDNEDLALLSGINPEKVVMVTWLIVATLATLAGTLYGLDKSF-- 241

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309
                F   +   +  I+GG+           ++             +        +   
Sbjct: 242 KPFTYFQLLLPFFAAAIVGGLGHPLGAIVGGFVIAFSEVTITYAWKKVLTYSVPESWAPD 301

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                        +  + L +V+L R   L + +
Sbjct: 302 GLVQLLSTDYKFAVSFVILLVVLLFRPTGLFKGK 335


>gi|300311946|ref|YP_003776038.1| branched-chain amino acid ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300074731|gb|ADJ64130.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 293

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 95/303 (31%), Gaps = 17/303 (5%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +      + ++ A GL+I+ G +G++++       IGAY   +L          L P   
Sbjct: 5   NGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTIGAYITYLLSHLTTTYAPALQPFYF 64

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
            ++      +           L + + +       +L  W      +           + 
Sbjct: 65  FVAIVLSFAVAYGVGYLTE--LLLISRLYKRPLDTLLATWGLSLAMQQTFRSIFGAKEVS 122

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
            T+   +     P+  +   +   +++     L+ +I + L R+      R    N+   
Sbjct: 123 ATLPDWLMGSFKPTDDIDIPLNGLFMMGLTVLLTGAIFVLLFRSRWGLQVRATMQNRVMS 182

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++         + FA+     G+AGA  A +    +         +    +V+ GG  S
Sbjct: 183 GAVGINTRKVDRTTFALGCGVAGVAGA--AFTTIGSTGPTSGSLYIVDTFLVVVFGGAQS 240

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L     +   +                 +L                A+ L++++R   L 
Sbjct: 241 LIGTIASAFSIAQTQSTAEFFLTGSMAKVLTLS-------------AVILILMLRPQGLF 287

Query: 341 RLR 343
            ++
Sbjct: 288 SVK 290


>gi|294651936|ref|ZP_06729225.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Acinetobacter
           haemolyticus ATCC 19194]
 gi|292822168|gb|EFF81082.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 356

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/325 (14%), Positives = 95/325 (29%), Gaps = 27/325 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---- 86
            A     Y  ++  +I+   + A  L +V G  G+LSL   + +A+G Y++ +       
Sbjct: 37  SAFYLSAYWVTLIGKIMCLALVALALDLVWGYAGILSLGHGLYFALGGYAFGMYLMRQSA 96

Query: 87  ------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS---EIFQNIL 137
                       W  +P     +      M L  L                  +     +
Sbjct: 97  GDGLPDFMRFLSWTELPWYWTGTEHILWAMALVILVPGIVAFIFGFFAFRSKIKGVYFSI 156

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I    +       +  +  +              F  +       + ++   +  L    
Sbjct: 157 ITQAMVFAAALLFFRNETGFGGNNGFTGFKTLLGFDITSAPMRATLCFITALVLMLCFIG 216

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L           IRD++     L    ++ KLSA+ +S+   G+AGA +      I+
Sbjct: 217 LRQLMNRPYGRVLGAIRDSENRLQYLGYRTLWYKLSAWVLSAVIAGIAGALYVPQVGIIN 276

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P       +I +   V  GG  +L        ++                    F  +  
Sbjct: 277 PSEMNPVNSIEMAVWVAAGGRGTLIGPILGAGLINAAKTY--------------FTVAAP 322

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                ++     +V L     ++ L
Sbjct: 323 EAWLLILGALFIVVTLFLPKGVIGL 347


>gi|225389472|ref|ZP_03759196.1| hypothetical protein CLOSTASPAR_03220 [Clostridium asparagiforme
           DSM 15981]
 gi|225044466|gb|EEG54712.1| hypothetical protein CLOSTASPAR_03220 [Clostridium asparagiforme
           DSM 15981]
          Length = 291

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/305 (16%), Positives = 105/305 (34%), Gaps = 25/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +   Q +IY + A G S +VG  GL++        IGA++       +G  +   +  
Sbjct: 7   ILNGVCQGMIYALMAIGYSTIVGVTGLVTFAYGEVVMIGAFAAYYCFEFFGAHLVPALLA 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +++G  G+++     +   D     +LI +     +L     I  G            
Sbjct: 67  GFLMAGLGGVVIHKVCYEHFFDAPRHISLICTIGMSMLLKNLAQILFGSQ---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +           +        +   +  LSA++ ++L RT      R++  ++K
Sbjct: 117 -VKGMPTFFGGRFISLGGIRISFLQLLIFGLVIGLSAALSIFLNRTRTGMTLRSVSQDKK 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +  + L+   +  A  G+ G         I P M   +  +   S  +LGG+
Sbjct: 176 AAALVGIDVERSTLTGNVLGCALGGVGGVLLGIYYGTIVPTMGG-TVGMKAFSASVLGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           T ++  A    ++     +                         +  + L LV+L++   
Sbjct: 235 TDVAGAAIGGLLIGICENI-------------GIMFMTTGLRDAIAFVFLILVLLVKPQG 281

Query: 339 LLRLR 343
           L   +
Sbjct: 282 LFGRK 286


>gi|239814755|ref|YP_002943665.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239801332|gb|ACS18399.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 328

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 54/306 (17%), Positives = 115/306 (37%), Gaps = 19/306 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LR  ++  +  +   V   L FL    +        +  +I I  +FA  L +++G  G+
Sbjct: 12  LRKARWRPLEFVAWAVAFALPFLMPSHSL-------LVNEIAIVALFAMSLDLILGYTGI 64

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           +SL     +  GAY+  +          + + V+A++S   G+I  +  L+       + 
Sbjct: 65  VSLGHAAFFGFGAYAAALFAKLVMPDPTVGLVVAAVLSAMLGLIASVTILRGSDLTRLMV 124

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL  + +   +  K   +T G  G+        LG              +F +Y     +
Sbjct: 125 TLGTALLLLELANKLDWLTGGADGLQGVVMGPVLGL------------FAFDLYGRTAAW 172

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
             L +  L    +  +  +      + IRDN+    ++   ++   +  + V++   G A
Sbjct: 173 YSLTVMLLLFLAMRRIVHSPFGATLKAIRDNRLRAMAIGIPVVSRVVVIYTVAAGIAGAA 232

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA  A +    S D+  F  +  V+ ++++GG+  L        +   +      +   Y
Sbjct: 233 GALLAQTTGFASLDVLAFDRSADVLLMLVIGGVGWLYGGVAGAIVFKLLQNWLSAVTPQY 292

Query: 306 FNSLLK 311
           +   + 
Sbjct: 293 WMFWIG 298


>gi|217978235|ref|YP_002362382.1| inner-membrane translocator [Methylocella silvestris BL2]
 gi|217503611|gb|ACK51020.1| inner-membrane translocator [Methylocella silvestris BL2]
          Length = 305

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 95/313 (30%), Gaps = 30/313 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---------SYVILGSRYG 89
           + +      IY + A G ++V G +G+++      + + A+         + ++  +   
Sbjct: 8   LINGVTLGSIYGLIAIGYTMVFGIIGMVNFAHGDVFMLSAFIALILFLALTQLLGLTSVA 67

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
            +  +++     ++     ++   + +       +A LI +      L     +  G   
Sbjct: 68  FAFVIVLFAGMALTSLWAFVIERIAYRRLRGSFRLAPLISAIGMSIFLSNLVYVLQGPRN 127

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             +             +IR     +  V   +    ++     L A     +++T+   A
Sbjct: 128 KALPP-------MFNDVIRLSEGGAYDVTLSVKQIMIVSVTAVLLAGFWFIVQKTSFGRA 180

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    + +    L   +       F + +A   +AG  +      I+     F   +  
Sbjct: 181 QRACEQDGRMAALLGVDVDRTISLTFVIGAALAAVAGVLYIVYYGVIN-SGDGFVPGVKA 239

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ SL        ++  V           +  +  F               L 
Sbjct: 240 FTAAVLGGVGSLPGAVLGGLLIGLVETFWAAYFSSDYKDVAAFS-------------ILV 286

Query: 330 LVILMRSHSLLRL 342
           + ++     L   
Sbjct: 287 VTLIFMPSGLFGR 299


>gi|124263100|ref|YP_001023570.1| putative branched-chain amino acid transport system permease
           [Methylibium petroleiphilum PM1]
 gi|124262346|gb|ABM97335.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Methylibium petroleiphilum PM1]
          Length = 310

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 97/309 (31%), Gaps = 16/309 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A +           + +   +
Sbjct: 9   LIGGLMSGMLYSLVALGFVLIFKASGVFNFAQGAMVLFAALAMARFAEWIPSLLGIHSRL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT----NGKAGIYVAD 154
            A +      I  + ++    + L +  L+  E    ++            G++      
Sbjct: 69  VANVLAFAAAIAVMVAVARAVERLCLRQLVNQEGVTLLMATLGIAHFLDGFGQSLFGSDI 128

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
               +G     L          ++      Y       L A + L+ ++T+   A R + 
Sbjct: 129 YTIDVGLPKDPLTVLESTLQGGLLISKEDLYAAAIATALVALLALFFQKTSTGRALRAVA 188

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           D+ +A  S+   +    +  ++V+     +AG  + +               +  + +VI
Sbjct: 189 DDHQATQSIGIPLDRIWVIVWSVAGFVALVAGVIWGSKLGVQFSLS---LVALKALPVVI 245

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           LGG+TS+        I+    +L            ++   +              + +L+
Sbjct: 246 LGGLTSVPGAIVGGLIIGMGEKLSEVYLGPALGGGIEIWFA---------YALALVFLLL 296

Query: 335 RSHSLLRLR 343
           R   L   +
Sbjct: 297 RPQGLFGEK 305


>gi|254702466|ref|ZP_05164294.1| inner-membrane translocator [Brucella suis bv. 3 str. 686]
 gi|261753034|ref|ZP_05996743.1| inner-membrane translocator [Brucella suis bv. 3 str. 686]
 gi|261742787|gb|EEY30713.1| inner-membrane translocator [Brucella suis bv. 3 str. 686]
          Length = 406

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 103/311 (33%), Gaps = 26/311 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                + + +  IQ+LI  +FA   S++ G  G+LS      + +G+++ V   + +G  
Sbjct: 20  PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHAMNAFGGE 79

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L  P+  +     G++ GL +  F      +   +++     +L    P   G  G  
Sbjct: 80  GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFG-- 137

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                          +YY+ L     S  +   L  T       
Sbjct: 138 ---------GEAGVSSFRMPAWGFDFGSTTEVYYLALAWVVGSILLPFLLTLTPFGRVTV 188

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R+N      L   +       FA+S+ F G+AGA  A + +  +  +F+   +  V+ 
Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
              +GG+ +    A   A +     +   +   +                    +   LV
Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLIFVLV 293

Query: 332 ILMRSHSLLRL 342
           ++     L+  
Sbjct: 294 MMFLPRGLVGE 304


>gi|220910439|ref|YP_002485750.1| inner-membrane translocator [Cyanothece sp. PCC 7425]
 gi|219867050|gb|ACL47389.1| inner-membrane translocator [Cyanothece sp. PCC 7425]
          Length = 322

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/325 (14%), Positives = 101/325 (31%), Gaps = 37/325 (11%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---------------- 82
             +      +Y +FA G +++   LG+++      + +GAY                   
Sbjct: 10  FLNGLSIGSVYALFALGYTLIFSILGIINFAHGAIFTLGAYFTYALMGGAFGFSGLLASL 69

Query: 83  ----ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               + G    L   +   +S+ ++G  G+ +   + +      +   L +       ++
Sbjct: 70  RLPLLDGLPVELRFLVATLLSSCLAGLVGVGIERIAFRPLRQRGSDPLLSVVSSLGVAVV 129

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               I               LG         F   +  +        +      +   + 
Sbjct: 130 VVNLIQYLVGAENYTFPANALGN--LPAALNFGSVAEPIPIRTVQVVIFAVAVVILILLT 187

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +  T    A R I ++      L   I    +  F +SS   G+AG     S   I+ 
Sbjct: 188 YLINATRFGKAMRAIAEDATTASLLGINIDRYIVFTFFLSSFLAGLAGTLVGVSV-SIAG 246

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F  +  +  +++++LGG+ S+        +L  +                     ++ 
Sbjct: 247 PYFGIAFGLKGLAVIVLGGLGSIPGAVVGGLVLGIIEAFV--------------PADYSA 292

Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343
               L    LFL++L+R   LL  +
Sbjct: 293 YRDALAFGILFLMLLVRPQGLLGRK 317


>gi|170721345|ref|YP_001749033.1| inner-membrane translocator [Pseudomonas putida W619]
 gi|169759348|gb|ACA72664.1| inner-membrane translocator [Pseudomonas putida W619]
          Length = 289

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 95/305 (31%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      +Y + A G  +       ++     A  +GA     L   +G  +WL +P 
Sbjct: 6   LVSGLGLGSMYALLALGFHLTYAVSRTVNFAQGSAMMVGAVLGYSLAVTWGWPLWLALPT 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G+ +    ++      + A L+ +     +L      T G            
Sbjct: 66  TLVLCAVLGLAIERFLVRPFHARGSDAWLMATVAGGLLLDNLAMFTFG-----------K 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S +   R              + L    ++A++    RRT +         N +
Sbjct: 115 EPRQFGSALTSLRLDLGDSSLNAVQLAIPLAGAAVAATLYWVRRRTQLGLRLEACVQNPR 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +     +AFA+S+ F  +AG   A                +   ++ ILGG+
Sbjct: 175 AARLMGIEVNRVVAAAFALSTVFAALAGLLIAPLYSV--HADMGTLFGLKAFAVAILGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S   +  A  +   +  +        F  LL F               + +V+  R   
Sbjct: 233 ASAGGVFAAGLLFGLLEAVVTLYFGSAFTQLLCF-------------ALVIVVLAARPDG 279

Query: 339 LLRLR 343
           L   +
Sbjct: 280 LFGRK 284


>gi|226953360|ref|ZP_03823824.1| branched chain amino acid ABC transporter permease [Acinetobacter
           sp. ATCC 27244]
 gi|226835898|gb|EEH68281.1| branched chain amino acid ABC transporter permease [Acinetobacter
           sp. ATCC 27244]
          Length = 356

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 95/325 (29%), Gaps = 27/325 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---- 86
            A     Y  ++  +I+   + A  L +V G  G+LSL   + +A+G Y++ +       
Sbjct: 37  SAFYLSAYWVTLIGKIMCLALVALALDLVWGYAGILSLGHGLYFALGGYAFGMYLMRQSA 96

Query: 87  ------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS---EIFQNIL 137
                       W  +P     +      M L  L                  +     +
Sbjct: 97  GDGLPDFMRFLSWTELPWYWTGTEHILWAMALVILVPGIVAFIFGFFAFRSKIKGVYFSI 156

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I    +       +  +  +              F  +       + +V   +  L    
Sbjct: 157 ITQAMVFAAALLFFRNETGFGGNNGFTGFKTLLGFDITSAPMRATLCFVTALVLMLCFIG 216

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L           IRD++     L    ++ KLSA+ +S+   G+AGA +      I+
Sbjct: 217 LRQLMNRPYGRVLGAIRDSENRLQYLGYRTLWYKLSAWVLSAVIAGIAGALYVPQVGIIN 276

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P       +I +   V  GG  +L        ++                    F  +  
Sbjct: 277 PSEMNPVNSIEMAVWVAAGGRGTLIGPILGAGLINAAKTY--------------FTVAAP 322

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                ++     +V L     ++ L
Sbjct: 323 EAWLLILGALFIVVTLFLPKGVIGL 347


>gi|83311701|ref|YP_421965.1| branched chain amino acid ABC transporter [Magnetospirillum
           magneticum AMB-1]
 gi|82946542|dbj|BAE51406.1| Branched-chain amino acid ABC-type transport system
           [Magnetospirillum magneticum AMB-1]
          Length = 291

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 98/293 (33%), Gaps = 13/293 (4%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
            + + + S  +    Y + A GL++V G++ +++L       +GAY       + GL   
Sbjct: 4   LTLQSLFSGVLSGAYYALIALGLALVFGTMRVINLAHGELVLLGAYISYTAEEKLGLDPL 63

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             +P++  +     +++       + D   + +LI++     IL     +          
Sbjct: 64  ASLPLALAVVVGTAILVYYLVSLIKKDR-ELNSLILTFGIGVILTNAVLMIWSADIHSAT 122

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
              Y   T +   +   +    F  + I +            ++  WL ++    A R +
Sbjct: 123 TPWYHDATILFDTLFAMQAELVFAGFGIALV----------GAVWWWLEKSWYGRALRAV 172

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             N+ A   +       ++ +FAVS     +AG   A    ++          +    I 
Sbjct: 173 ASNRDAAKLMGVNPQLTEILSFAVSGVLATVAGI--AIYTAKVIQPAMGHHLTVKAFIIT 230

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           +L GM S+  +     +L  V  L   M       L        +       +
Sbjct: 231 VLAGMGSVPGVLLGAVLLGIVESLTVTMASSALQELAGMVLFLVVLLLMPSGL 283


>gi|84385760|ref|ZP_00988790.1| ribose ABC transporter, permease protein [Vibrio splendidus 12B01]
 gi|84379076|gb|EAP95929.1| ribose ABC transporter, permease protein [Vibrio splendidus 12B01]
          Length = 328

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 87/312 (27%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  I  + A G+++V+ + G + L+     A
Sbjct: 30  LIALIFLIVVVSFLNPNFFTVDNILNILRQTSINAIIAVGMTLVILTAG-IDLSVGSVLA 88

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +       +  +       +    +   + +                + F  
Sbjct: 89  LCGAFAASMIGMEIPVMIAVPTALVAGAALGAISGVIIAK------------GKVQAFIA 136

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F        Y + +   +  M  + A
Sbjct: 137 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFG-----TGYAMGIPVPVWIMAVVFA 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           ++   L  T        +  N+ A       +   K+  +A+      +AG   A+    
Sbjct: 192 AVWYLLNHTRFGRYVYALGGNESATRLSGIDVDKVKIGVYAICGLLAAVAGIIVASRLSS 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      ++   +  ++
Sbjct: 252 AQPTAGMGYELDAIAAVVLGGTSLAGGRGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 311

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 312 AKAVVILLAVLV 323


>gi|170741801|ref|YP_001770456.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168196075|gb|ACA18022.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 334

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 54/289 (18%), Positives = 111/289 (38%), Gaps = 14/289 (4%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
                      ++ +   ++LI+ + A  L +V+G  GL+S        IGA +  IL +
Sbjct: 40  VPPAAQALGLPFLTATATRMLIFGLAALSLDLVLGLGGLVSFGHAAFLGIGATALGILDA 99

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
                + L +P +    G   ++ G  +L+ RG Y  + TL   ++   + +       G
Sbjct: 100 HGLRDLALQVPAAVASCGLFALVTGAIALRTRGVYFIMITLAFGQMAYFLAVSLAA-YGG 158

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             G+ ++ R    G  +                   ++Y  L +   +   +  +  +  
Sbjct: 159 DDGMALSRRSTLFGRPLLDGDE-------------ALFYAALAVMAGALLGLRRVAGSRF 205

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R  RDN     ++       +L+A+ ++ A  G+AG   A   + +SP    +  +
Sbjct: 206 GRVLRGTRDNPTRMEAIGFPAFPYRLTAYGLAGALAGLAGVLLANQAEFVSPAYMSWQRS 265

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
             +I +V+LGG  +L       A LI + E+    + ++   L     +
Sbjct: 266 GELIVMVVLGGRGTLVGPVVGAAALIALEEVLARHSEHWRLGLGLILVA 314


>gi|39998483|ref|NP_954434.1| branched-chain amino acid ABC transporter permease [Geobacter
           sulfurreducens PCA]
 gi|39985430|gb|AAR36784.1| branched-chain amino acid ABC transporter, permease protein
           [Geobacter sulfurreducens PCA]
 gi|298507428|gb|ADI86151.1| branched-chain amino acid ABC transporter, membrane protein
           [Geobacter sulfurreducens KN400]
          Length = 291

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 99/305 (32%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G + L++      +  GA+  +++ + + ++I++ + +
Sbjct: 6   LINGIALGSTYALIALGYTMVYGIIALINFAHGEIFMAGAFVGLLMVAVFKMNIFVAMIL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G+++ L + +       ++ LI +      L     +  G            
Sbjct: 66  AMATCMVMGVVIELIAYRPLRKSSRLSALISAIGVSIFLSTLALMIFGADAKGFP----- 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +     +              ++     L   +   +++T I  A R   ++  
Sbjct: 121 -----DTAFPVRQVKVLGAEISTLQLLIIGVSALLMLGLEFIVQKTKIGKAMRATSEDYN 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       FA+ S+     G       + +S +M      +   S  +LGG+
Sbjct: 176 TAALMGINVNRVISFTFALGSSLAAAGGVLVGLLFNAVSFNM-GLMAGLKAFSAAVLGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+                  G        ++     ++     +    L LV+L++   
Sbjct: 235 GSIPGAML-------------GGLLLGVAEVMGVAAGYSSYRDAIAFAILVLVLLVKPTG 281

Query: 339 LLRLR 343
           LL  +
Sbjct: 282 LLGQK 286


>gi|206901669|ref|YP_002250650.1| branched-chain amino acid ABC transporter, permease protein
           [Dictyoglomus thermophilum H-6-12]
 gi|206740772|gb|ACI19830.1| branched-chain amino acid ABC transporter, permease protein
           [Dictyoglomus thermophilum H-6-12]
          Length = 293

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 99/303 (32%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A G ++V G L L++      Y +GA+        + +   + + V
Sbjct: 9   IINGISLGSIYALIALGYTMVYGILRLINFAHGDIYMLGAFIGFFALGSWDMPFAIGLIV 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++   G+++   + K   +   I+ LI +     +L     +  G            
Sbjct: 69  AMLLTAIIGILVEKLAYKPLRNAPRISLLITAIGVSFLLENIMVLLVGAT---------- 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    +    +I       +L    FL   +   + +T I  A R +  +++
Sbjct: 119 -PRAFPQKIPTEVYLIGNIIVTNKQIIILSVSIFLMLFLQFVVNKTKIGRAMRAVSQDKE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   I       FA+ SA     G       ++I P M      +      +LGG+
Sbjct: 178 MAQMLGVNIDNVISFTFALGSALAAAGGVLVGMYFNKIEPYM-GIMPGLKAFVAAVLGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        I+     L            + F             I L +++L++   
Sbjct: 237 GIIPGAMLGGFIMGIAEVLVSAFISSTIRDAIAF-------------IILIVILLVKPTG 283

Query: 339 LLR 341
           +L 
Sbjct: 284 ILG 286


>gi|319796033|ref|YP_004157673.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315598496|gb|ADU39562.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 414

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 60/308 (19%), Positives = 115/308 (37%), Gaps = 34/308 (11%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  IQ+LI  +FA   +++ G  G+LS      + +GA+  V   +  G +  L  P+
Sbjct: 26  LLNAAIQMLIAALFASAYNLLCGQAGMLSFGHAAYFGVGAFGTVHAMNAIGGAGLLPTPL 85

Query: 99  SAMISGACGMIM----GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
             +   ACG++     G  + K  G Y A+ TL ++E+  ++    K +  G+AG+    
Sbjct: 86  MPLAGAACGLVFGGIAGWFATKRTGTYFAMITLAIAELVHSLAPHLKGLFGGEAGVSTMR 145

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
              +      +                 +YY+ L    LS  ++    RT +      +R
Sbjct: 146 MPAWGLDFGSTTQ---------------VYYLTLAWVLLSVLLLYLFTRTPMGRLAYGLR 190

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           +N      L   +    +  FA+S+ F G+AG     S +  +  +F  + +  V+    
Sbjct: 191 ENSHRLRFLGYNVHGLGMLVFAISAMFSGIAGGLQVVSNESANYVVFDPALSAAVVLNTY 250

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +GG+      A   A++         +   +                    I   LV++ 
Sbjct: 251 IGGVKVFLGPAFGAALMTFFGYAVSDLTQSW---------------LLYQGILFVLVMMF 295

Query: 335 RSHSLLRL 342
               L  L
Sbjct: 296 MPSGLAGL 303


>gi|116694455|ref|YP_728666.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
 gi|113528954|emb|CAJ95301.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
          Length = 338

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 57/323 (17%), Positives = 137/323 (42%), Gaps = 16/323 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+Y ++L   L A  +  Y   +  +++ + +FA   ++++G  GLLS      +    Y
Sbjct: 24  VMYGVVLACLLAAPLAGAYPVFVL-KVMCFALFACAFNLLIGYTGLLSFGHAAFFGGAGY 82

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +       +G++  + + +        G ++G  +++ +G Y ++ TL ++++   I ++
Sbjct: 83  AAGHAMKVWGVTPEIGLILGTGAGALIGYVVGSLAIRRQGIYFSMITLALAQMLFFICLQ 142

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
               T G+ G+    R                F    +  ++ +YYV L +   + ++I+
Sbjct: 143 AP-FTGGEDGLQGIPR-------------GKLFGVLPLSDDLTLYYVALAIIVAAFALIV 188

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
               +      + I++N+    SL   +   KL+AF +S+A  G+AG+  A      +  
Sbjct: 189 RTVHSPFGQILKAIKENEPRAVSLGYDVDRFKLTAFVLSAALSGLAGSIKALVLGFETLT 248

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN-SLLKFDCSFNM 318
              +S + +VI + +LGG+ +L+       ++I +      +  Y    + + +      
Sbjct: 249 DVHWSMSGMVILMTLLGGLGTLTGPIVGAFVVIALENKLGELGSYLAAVTDIDWFNGLGE 308

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
             + +  I   + +L     ++ 
Sbjct: 309 SVSMVTGIIFIVCVLTFRKGIVG 331


>gi|121608870|ref|YP_996677.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121553510|gb|ABM57659.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 326

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 64/329 (19%), Positives = 126/329 (38%), Gaps = 29/329 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  +    +L   +        +    +  L   + A   +I+ G  G  S    + +  
Sbjct: 8   LAGIALFAVLVGCVPLLTRSGAMLHFVMMALYATLIAQAWNILGGFGGQFSFGHALFFGT 67

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQ 134
           GAY   I   + G++ W  +P++   S   G+++G P+     +G Y A+ TL  +E+ +
Sbjct: 68  GAYIQAIAQLQGGINPWAALPMAMAGSALVGLLVGAPTFRCGLKGSYFALVTLAFAEVSR 127

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +     T G  G+ +  R         S                   +V L M   +
Sbjct: 128 IVALS-VSFTGGGVGLMLPLRESAGNLQFASR--------------AGYLWVALAMVVGA 172

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +  WLR        + +RD++ A  ++    +  KL+A ++S+AF+G AGAF+     
Sbjct: 173 LLVTWWLRNGRFGACLQAVRDDEDAARAVGVNPLRVKLAAISLSAAFMGAAGAFYLQVFQ 232

Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
            I P   +  + ++  +   I+GGM +L       A+L  + +L   +            
Sbjct: 233 YIDPGIAYGPATSVEALVGAIVGGMGTLWGPVLGAAVLHLLSDLTRNLFGAL-------- 284

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 +  +   AL L+++     +  L
Sbjct: 285 ---PGINMVIYGSALVLIVIFLPRGVAGL 310


>gi|329915396|ref|ZP_08276252.1| Urea ABC transporter, permease protein UrtB [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327544932|gb|EGF30280.1| Urea ABC transporter, permease protein UrtB [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 305

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 92/303 (30%), Gaps = 17/303 (5%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +      + ++ A GL+I+ G +G++++       IGAY   +L +          P   
Sbjct: 17  NGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTIGAYMTYLLSTLTTKYAPAFQPYYF 76

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
            ++     +              + + +       +L  W      +           + 
Sbjct: 77  FLAIVLSFLAAYGVGYLTER--LMISRLYKRPLDTLLATWGLSLLMQQTFRSIFGAKEVS 134

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
            T+   +     P+  +   I   +++     ++  I L L R+      R    N+   
Sbjct: 135 ATLPDWLMGSFKPTDSIDIPINGAFMMGLTVVMTGGIFLLLFRSRWGLQVRATMQNRLMS 194

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++         + FA+     G+AG+  A +    +         +    +V+ GG  S
Sbjct: 195 GAVGINTRKVDRTTFALGCGVAGVAGS--AFTTIGSTGPTSGSLYIVDTFLVVVFGGAQS 252

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L     +   +                 +L                A+ ++++MR   L 
Sbjct: 253 LIGTIASAFSIAQTQSTAEFFLSGSMAKVLTLS-------------AVIVILMMRPQGLF 299

Query: 341 RLR 343
             +
Sbjct: 300 SSK 302


>gi|325291511|ref|YP_004277375.1| sugar ABC transporter transmembrane protein [Agrobacterium sp.
           H13-3]
 gi|325059364|gb|ADY63055.1| sugar ABC transporter, membrane spanning protein [Agrobacterium sp.
           H13-3]
          Length = 360

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 93/313 (29%), Gaps = 18/313 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +   +      G   S   +  +  Q+ I  +     S+V+ + G + L+     
Sbjct: 52  LIVLVLSLAVFGMTLGGKFFSAFSLTLILQQVAIVGIVGAAQSLVILTAG-IDLSVGAIM 110

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +        RYGL   L I     +   CG I G+   + R     +   +   +  
Sbjct: 111 VLSSVVMGQFTFRYGLPAELSIICGLAVGAFCGFINGVLVSRMRLPPFIVTLGMWQIVLA 170

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +     T     I     +               F ++  I      Y ++ M  L 
Sbjct: 171 TNFLYSANETIRSQDIVQQAPILQF------------FGNNVRIGSAVFTYGVIAMVLLV 218

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A +   L RTA       + D+  A       +     + + +S      AG        
Sbjct: 219 ALLWYVLNRTAWGRHLYAVGDDPDAAELAGVNVKRMLTTVYTLSGLICAFAGWALIGRIG 278

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   +F+    + ++VI      GG  S+  +     I+         +      + 
Sbjct: 279 SVSPTAGQFANIESITAVVIGGISLFGGRGSIMGMIFGALIVGVFSLGLRLIGTDPQWTY 338

Query: 310 LKFDCSFNMRHTT 322
           L       +    
Sbjct: 339 LLIGVLIILAVAI 351


>gi|317126301|ref|YP_004100413.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Intrasporangium calvum DSM 43043]
 gi|315590389|gb|ADU49686.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Intrasporangium calvum DSM 43043]
          Length = 355

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 62/326 (19%), Positives = 132/326 (40%), Gaps = 10/326 (3%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILG 85
           + +    +  +       +    + A GL+++ G  G LSL      A+GAY+    +  
Sbjct: 35  IVVVIETAGSFRQGQLSSMAYLAIAAGGLTVLTGQSGQLSLGHGALMAVGAYTTALLLQS 94

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
                 + +++ ++ +++   G+ +G+P+ +  G Y+A ATL ++     + + +     
Sbjct: 95  RAGAPPLVVVLAIATVVTLVVGVAVGIPAARLHGPYIAGATLSLAVAVPGVALYFSEQLG 154

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G+ G+ +      +          F      +    ++ YV      L+  ++  L  + 
Sbjct: 155 GEQGLTLRVPEAPVWLLDT----MFFITGQELTGRKYVAYVAWFCLVLTYLLLANLGASR 210

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +   WR +RD++ A       +  A++ AF VS+A  G+AGA  A      +P  F  + 
Sbjct: 211 VGRRWRAVRDDEVAAAIAGINLGRARVLAFVVSAAAAGLAGAVMALVVRVSAPSGFTLTL 270

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           ++ ++S ++LGG+ SL       AIL  + ++   +           D         +  
Sbjct: 271 SLGLLSAIVLGGLGSLLGALIGAAILTFLPQVVTSIG----QDAGLSDLQAAELAPLVYG 326

Query: 326 IALFLVILMRSHSLLRLRTPSNFLER 351
           + + LVIL+    L+          R
Sbjct: 327 LTVILVILLAPAGLVGTIRSGLAHRR 352


>gi|292655063|ref|YP_003534960.1| putative branched-chain amino acids ABC transporter permease
           [Haloferax volcanii DS2]
 gi|291372311|gb|ADE04538.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haloferax volcanii DS2]
          Length = 322

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/325 (12%), Positives = 97/325 (29%), Gaps = 35/325 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS-----------------Y 81
           + +   Q  IYV+ A GLSI++G+L  ++      Y +G Y+                 +
Sbjct: 11  LLNGLQQGAIYVLLAVGLSIILGTLKFVNFAHGALYLVGTYAGLFVALNVPLSNGKLAEW 70

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                   +     +    +     G++M     +   D      ++++     ++ +  
Sbjct: 71  GFSSFGLDIGFLAALLFVPLFVFGVGLLMERYLARAFYDRPDTDQILVTFGLAIVVQELF 130

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI--YEIFMYYVLLGMCFLSASIIL 199
            +  G   +        L     + I      +  ++  +  +  +V+     L A + L
Sbjct: 131 RVLFGSNSLPFEQPERILSVGSFAGIPVSGPIALPIVGNFPQWRLWVIGITAVLVALVYL 190

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  T      R    + +    L   I    +  F + +A  G+AG         +   
Sbjct: 191 LVEYTDFGLVVRAGTRDAEMVRLLGIKITRPYIVVFGIGAALAGVAGVVGGPL--NVVNP 248

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
               +  +     V++GG+ S++       +              +              
Sbjct: 249 TIGTNILVPAFLTVVIGGVGSIAGAVVGGIVFGLTTAALVSFAPAWSQVG---------- 298

Query: 320 HTTLMVIALFLVILMRSHSLLRLRT 344
               +     +V+L R   LL    
Sbjct: 299 ----LYAIAAIVLLTRPQGLLGDEE 319


>gi|27366522|ref|NP_762049.1| ribose ABC transporter permease [Vibrio vulnificus CMCP6]
 gi|27358088|gb|AAO07039.1| Ribose ABC transport system, permease protein RbsC [Vibrio
           vulnificus CMCP6]
          Length = 328

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 97/312 (31%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 30  LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 88

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   ++        + +++ +P + +     G I G+   K +        + M+     
Sbjct: 89  LCG-AFAASLVAMEVPVFIAVPTALLAGATLGAISGIIIAKGKVQAFIATLVTMT----- 142

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G   +Y   R    G T  +    +      +   + ++ +++       
Sbjct: 143 -------LLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVVVFAAAWY 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +      T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 196 LL----NHTRFGRYVYALGGNESATRLSGINVDKVKIGVYAICGLLAALAGIIVTSRLSS 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 252 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 311

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 312 AKAAVILLAVMV 323


>gi|327395601|dbj|BAK13023.1| high-affinity branched-chain amino acid transport system permease
           protein LivH [Pantoea ananatis AJ13355]
          Length = 308

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 87/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMVIAALMMMGIDTSWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
                    +I+                     +   I  I           +    R  
Sbjct: 72  MIAAGFVMAVIISSAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + +                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLITGQWTLGESNGFAATLSTMQLVIWVVTFLTMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGSINPF-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L     L        +  ++ F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|284045418|ref|YP_003395758.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283949639|gb|ADB52383.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 382

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/335 (14%), Positives = 100/335 (29%), Gaps = 25/335 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   I   +      +L L  G     +   +      IY + A GL++V G L L++  
Sbjct: 71  RPAAIAATVVGNVAAVLILDYGLHDVAQRGLNGLSLGAIYALGAVGLTLVYGILRLVNFA 130

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +GAY   ++   +GL +   + V+ +++ A  + +            A    ++
Sbjct: 131 HGDLLTLGAYVAYVVNVSWGLPLVAGVVVAIVVTAAFSVALERAMWAPMRARGAGMLQLL 190

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                   +            Y     +        +          +        VLL 
Sbjct: 191 IMAIGLAFVI----------RYGIQFAWGTELRQLRVDSSAAVSFLGLRIGRTQLIVLLV 240

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
                 +  L L+RT +    R + D++    +         +  +  + A  G+AG F 
Sbjct: 241 GVAALLATGLMLKRTLLGKRMRALSDSRDLAETSGIDTSRVIMWTWIFAGALAGLAGVFA 300

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            A           F   + + + V+LGG+ +      A  +L  V+E    +       +
Sbjct: 301 GAVTQL--QPELGFELLLPIFAAVVLGGIGNAFGALTAGLVLGLVIEWSTLVLPDGLKLI 358

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           + F     +                R   +     
Sbjct: 359 VGFVVLIVVLVI-------------RPEGIFGRAR 380


>gi|39934493|ref|NP_946769.1| transport system permease [Rhodopseudomonas palustris CGA009]
 gi|39648342|emb|CAE26862.1| possible transport system permease protein [Rhodopseudomonas
           palustris CGA009]
          Length = 336

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 60/327 (18%), Positives = 125/327 (38%), Gaps = 23/327 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            ++ +L+           Y   +    L+YV  A   +IV G  G +SL   +   IGA 
Sbjct: 14  WLWGILVLAACLPLALNSYHLHLLTLALVYVALASAWNIVGGMAGQVSLAHSLFIGIGAM 73

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
               L  ++G+++W  + +SA I+GA G ++     +F+  +L+   + ++      +I 
Sbjct: 74  LSTALLVKFGINMWAGLVISAAIAGALGAMIAWIDFRFQLGHLSFVLITLAFAEMGAIIV 133

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                 G A   +  R        +                   ++V+LG+      + +
Sbjct: 134 EGWEFLGGASGLLLPRDTGDFWAFQ------------FGGGRGAFWVMLGLAAAVVLVNV 181

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +    +    RTIRDN+KA  ++   ++  K++A  +S+    + G  +        P 
Sbjct: 182 AILNAPLGYYLRTIRDNEKAAQAIGVNVLRHKITAMTISAVLTSIVGTCYVRYLTFADPY 241

Query: 260 -MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            +   +  I ++    +GG+      A    +L+ + E+  G          +   +   
Sbjct: 242 LLATPTITIEIVLFATVGGLGRAFGPALGALLLVPLGEVLRG----------QLGGAVPG 291

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345
            H  +  + + +VIL+    LL L   
Sbjct: 292 LHYFIYGVVVIVVILVTPRGLLPLAER 318


>gi|46202726|ref|ZP_00052709.2| COG0559: Branched-chain amino acid ABC-type transport system,
           permease components [Magnetospirillum magnetotacticum
           MS-1]
          Length = 279

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/284 (15%), Positives = 93/284 (32%), Gaps = 13/284 (4%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +    Y + A GL++V G++ +++L       +GAY       + GL     +P++  +
Sbjct: 1   MLSGAYYALIALGLALVFGTMRVINLAHGELVLLGAYISYTAEEKLGLDPLASLPLALAV 60

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                +++       + D   + +LI++     IL     +             Y   T 
Sbjct: 61  VVGTAILVYYLVSLIKTDR-ELNSLILTFGIGVILTNGVLMIWSADIHSATTPWYHDATI 119

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +   +    F    I +            ++  WL ++    A R +  N+ A   
Sbjct: 120 LFETLFAMQAELVFAGIGILLV----------GAVWWWLEKSWYGRALRAVASNRDAAKL 169

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +       ++ +FAVS     +AG   A    ++          +    I +L GM S+ 
Sbjct: 170 MGVNPQLTEILSFAVSGLLATVAGV--AIYTAKVIQPAMGHHLTVKAFIITVLAGMGSVP 227

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            +     +L  V  L   +       L        +       +
Sbjct: 228 GVLLGAVLLGVVESLTVTLASSALQELAGMVLFLVVLLLMPSGL 271


>gi|28871220|ref|NP_793839.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|28854470|gb|AAO57534.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 293

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 93/303 (30%), Gaps = 17/303 (5%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +      + ++ A GL+I+ G +G++++       +GAY+  +L +     +  + P   
Sbjct: 5   NGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTVGAYTTYVLSTLVQTYMPSMQPYYF 64

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
             + A   ++             + + +       +L  W      +  +        + 
Sbjct: 65  FFAIALSFVVAGSIGWLVER--VMISRLYHRPLDTLLATWGLSLVMQQALRSIFGAREVS 122

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                 +      S  +       +V+     L+  I L L RT      R    N+   
Sbjct: 123 ANPPEWLMGAVSLSDTIEIPRNGLFVMALTVLLTGCIFLMLYRTRWGLHVRATVQNRVMS 182

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++           FA+     G+AGA  A +    +         +    +V+ GG  S
Sbjct: 183 RAVGINTREVDRMTFALGCGVAGVAGA--AFTTIGSTGPTAGSLYIVDTFLVVVFGGAQS 240

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L     +   +     +           +L                A+ L++LMR   L 
Sbjct: 241 LLGTIASAFTIAQTQSIAEFFMSGSMAKVLTLS-------------AVILILLMRPQGLF 287

Query: 341 RLR 343
             +
Sbjct: 288 SSK 290


>gi|296134157|ref|YP_003641404.1| inner-membrane translocator [Thermincola sp. JR]
 gi|296032735|gb|ADG83503.1| inner-membrane translocator [Thermincola potens JR]
          Length = 297

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 96/305 (31%), Gaps = 22/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++      + +G Y      + + L  +L   +
Sbjct: 10  LANGISLGSLYALVAIGYTMVYGILRLINFAHGDIFMMGTYFAFYGIAVFTLPWYLSFLL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++G  GM++   + +   D   I+ LI +     +L     +  G            
Sbjct: 70  AIVLTGILGMMLEAGAYRPLRDAPKISILISAIGASFLLENLAVVIFGGRPKAFPTP--- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +         +  +   + + +    L  +++  +  T    A R +  + +
Sbjct: 127 -------RVLTDVVHIGSISIQNLTFVIPVVTIGLLIALLYLVHNTKAGMAMRAVAKDYE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + S    + G  +     +I   +      +      ++GG+
Sbjct: 180 TAAIMGVNVNKVISLTFCIGSMLAAVGGIMWGLKFPQI-IPLLGVMPGLKAFIAAVIGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        +L     +            + F             + L L++L R   
Sbjct: 239 GDIKGAVIGGFVLGIGEIML-----------VAFLPELTGYRDAFAFVLLILILLFRPTG 287

Query: 339 LLRLR 343
           +L  +
Sbjct: 288 ILGEK 292


>gi|254489168|ref|ZP_05102372.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. GAI101]
 gi|214042176|gb|EEB82815.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. GAI101]
          Length = 318

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/323 (15%), Positives = 108/323 (33%), Gaps = 30/323 (9%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
            +    +  L+  M + GL+++   +G+L+      Y +GAY    +        W+ + 
Sbjct: 7   NLIDGLVTGLLLFMLSAGLTLIFSMMGVLNFAHASFYMLGAYFAYQISVAL--GFWMGLL 64

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           ++ ++ G  G  +    L+    Y  +  LI +     ++ +      GK  +       
Sbjct: 65  IAPLLVGVLGAGVERYGLRRVHQYGHVPELIFTFGLALLIEEMVQFVWGKNQMPY----- 119

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
               +V  ++ F  F  S      +  +++     +   ++  L +T +    +      
Sbjct: 120 ----SVPEVLNFTAFAISGNSIPAYKIFMIFISIGIFIGLLYILTKTRVGMIIQAALSYP 175

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +   +L   +    +  F V +A  G+AG          +     F    IV   +++GG
Sbjct: 176 RTVEALGHNVPLIFMGVFGVGTALAGLAGVIAGPVLG--TFPGMAFVLGSIVFVTIVIGG 233

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF-----------------NMRH 320
           + SL     A+ ++  +       N    + L     S                      
Sbjct: 234 LGSLWGALVASLLIGWITTFAKSYNIEMESLLNAIGISTPENLSDSVFRDFWSLTSPQIA 293

Query: 321 TTLMVIALFLVILMRSHSLLRLR 343
             L  I + L+++ R   L   R
Sbjct: 294 DILPYILMVLILIFRPAGLFGKR 316


>gi|317125500|ref|YP_004099612.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Intrasporangium calvum DSM 43043]
 gi|315589588|gb|ADU48885.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Intrasporangium calvum DSM 43043]
          Length = 289

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 54/308 (17%), Positives = 109/308 (35%), Gaps = 26/308 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y          Y + A GL+++ G LG+++ +    Y +GA    +L +   ++ WL +
Sbjct: 6   QYTLQGLAAGGFYAVSALGLAVIFGVLGVVNFSHGAVYMLGAVLAAVLLAELNVNFWLAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +  +I    G++M    +++      +   +++     +L++      G +G+      
Sbjct: 66  VIVPIIMFGFGVLMERALIRWLLQLDPLYNFLLTFGLTLVLVEAVKQRYGVSGLPYQIPP 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G                V    +  +  L    +  ++ L L RT I    R   + 
Sbjct: 126 GLGGQ----------VTVGSVGLPTYAIFACLFSVVVCIAVGLLLTRTRIGMIVRAATEA 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +   +L   +       F    A  G+AG   A SR   +     F   II+ ++V++G
Sbjct: 176 PERTRALGINVGRWVTPVFGFGIALAGLAGVLAAPSRAITAEMGSNFV--IILFAVVVIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+     A  ++  V                            ++ I + LVIL+R 
Sbjct: 234 GLGSILGAVVAGFLVGLVEAYGVAYA--------------PAYAQIVIFIMMALVILVRP 279

Query: 337 HSLLRLRT 344
             L     
Sbjct: 280 AGLFGREE 287


>gi|289581840|ref|YP_003480306.1| inner-membrane translocator [Natrialba magadii ATCC 43099]
 gi|289531393|gb|ADD05744.1| inner-membrane translocator [Natrialba magadii ATCC 43099]
          Length = 416

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 62/342 (18%), Positives = 114/342 (33%), Gaps = 40/342 (11%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG------SRYGLSIW 93
            +  I +L   +FA     + G  G LS      Y  GAY  V+           G    
Sbjct: 52  LTFMIIVLYMGLFAISFDFISGYTGYLSFGHAAFYGTGAYFVVLAANGQVPGVPEGTPFM 111

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + + + A ++    + +G  S +  G Y A+ TL  +++    +  W  +++        
Sbjct: 112 VTMVLGATLAFVVALAIGAVSFRLTGVYFAMLTLGFAQVMYEFIRHWGYVSSNPTEGATI 171

Query: 154 DRLYFLGTTVRSLIRFFRF--------------PSSFVIYEIFMYYVLLGMCFLSASIIL 199
                L   V  +                        V   +  YY L  +  LS  ++ 
Sbjct: 172 SSGADLSIGVPFVDSLNFAVGRLSGDSFENVLGLGIDVSATMTSYYALGIVVLLSYFVMQ 231

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +        IR+N++   ++   + + K+ AFA S+ F  +AGA FAA     SPD
Sbjct: 232 RIIHSPFGKVMIAIRENEERARAVGYNVFWYKMGAFATSAFFAAIAGALFAAYAGGASPD 291

Query: 260 -MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK------- 311
             F F      + + I+GG+ +L+             ++    +      L +       
Sbjct: 292 NSFYFLVTADALIMAIIGGIGTLAGPLFGALFHEWFEDILSTESDGLSTYLEQLLPESVL 351

Query: 312 ------------FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                            + R    + I   L +L   + LL 
Sbjct: 352 TAEVAGLTINDFIGTFLDGRAPLYLGIIFVLFVLFVPNGLLG 393


>gi|15890469|ref|NP_356141.1| ABC transporter, membrane spanning protein (branched chain amino
           acid) [Agrobacterium tumefaciens str. C58]
 gi|15158700|gb|AAK88926.1| ABC transporter, membrane spanning protein (branched chain amino
           acid) [Agrobacterium tumefaciens str. C58]
          Length = 335

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 54/335 (16%), Positives = 116/335 (34%), Gaps = 28/335 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K    L  LA    ++    +G       + ++  +I+   +    + +V G  G+ +
Sbjct: 14  IPKARSPLRTLAGPLLIITAAIIGYFLFPDNL-ALLTRIIAIALLVLSIDLVTGYCGVAT 72

Query: 68  LNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           L     +  GAY+  I  + +      L+  + A   G  G++ G   L+  G    + +
Sbjct: 73  LGHAALFGAGAYAAGIAAAHFEITDPLLMTVIGAAGGGVAGLLSGTVLLRAHGLPQLVLS 132

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           + +  +F     K    T G  G+         GT              F ++    Y  
Sbjct: 133 IAVIHLFHEAANKASGWTGGSDGLSGVSPDALFGT------------FEFDLFGRTAYVY 180

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            + +  L    +  +  +      R ++ +     ++  ++    L  F +S    G+ G
Sbjct: 181 GVCLLLLVFIALRVVVNSPFGMLCRGVKQDSIRIQAMGGSVNGTVLKMFVISGIVAGIGG 240

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A  A S   +  D   F+ +   + +++LGG  SL      T   +   ++    N +++
Sbjct: 241 ALNAISTQVVGLDSLSFTLSAEGLVMLVLGGAGSLYGALIGTVTFMWFEDVVSAANPFHW 300

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                          T++ + L  V+L     L  
Sbjct: 301 --------------LTIVGLLLIAVVLFAPRGLYG 321


>gi|261405483|ref|YP_003241724.1| urea ABC transporter permease UrtB [Paenibacillus sp. Y412MC10]
 gi|261281946|gb|ACX63917.1| urea ABC transporter, permease protein UrtB [Paenibacillus sp.
           Y412MC10]
          Length = 301

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 88/290 (30%), Gaps = 16/290 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           +  G + ++++       IGAYS  +    +   +      +  I+      M   ++ +
Sbjct: 27  VTFGLMNVINMAHGELIMIGAYSTYVTQGLFSAYMPKSWFDTYFIAALLVSFMVAAAVGW 86

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
             + + I  L       ++L  W      +           +  T  S +      +S +
Sbjct: 87  LLETVLIRHL-YGRPLDSLLATWGVGMMLQQIARFIFGAPNVAVTSPSWLNGGLAITSSI 145

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I      +++L +  +  ++ L++ RT      R +  N+     L  +        FA+
Sbjct: 146 ILPYKRLFIVLLVAVVLTAMYLYIYRTVQGRRMRAVMQNRSMAGCLGISTRRVDGLTFAI 205

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG                    +    +V+LGG+  L         +     L
Sbjct: 206 GSGIAGIAGCALTLLGPI--GPSIGTYYIVDAFMVVVLGGVGKLVGTVAGALGIGVFNTL 263

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                                    L+   +   +  +   L+ LRT S 
Sbjct: 264 FETYTSASIGK-------------VLVFACIVAFLQWKPRGLVALRTRSL 300


>gi|154245386|ref|YP_001416344.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154159471|gb|ABS66687.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 330

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 58/312 (18%), Positives = 119/312 (38%), Gaps = 14/312 (4%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
              +L + +             ++++ + +FA   ++++G  GLLS    + +   AY  
Sbjct: 25  IFGILAIAVLLAAPFGVYPVFLMKVMCFALFACAFNLLLGYTGLLSFGHAMFFGGSAYVC 84

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                  G +  L I    + +   G I GL +++ +G Y A+ TL ++++F    ++  
Sbjct: 85  AHTIKVMGFTPELGILAGVVFAAMLGFISGLLAIRRQGIYFAMVTLALAQMFFFFCLQA- 143

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
             T G+ G+    R                F    +  +I +YY++L +      +I   
Sbjct: 144 RFTGGEDGLQAVPR-------------GALFGLIDLSKDINLYYLVLAIFVFGFLVIYRA 190

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +      + IR+N+    SL   +   KL AF +S+A  G+AGA         S    
Sbjct: 191 IHSPFGQVLKAIRENEPRAISLGYRVNQYKLLAFVLSAALAGLAGATKVLVFQLASLTDV 250

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            +  +  VI + ++GGM ++       A+++ +     G+  +                 
Sbjct: 251 AWQMSGEVILMTLVGGMGTILGPIVGAAVIVTMQNYLAGLGEWVLVIQGVIFVLAVSLFR 310

Query: 322 TLMVIALFLVIL 333
              V  +  +I 
Sbjct: 311 RGFVGEVIAIIQ 322


>gi|261341947|ref|ZP_05969805.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Enterobacter cancerogenus ATCC 35316]
 gi|288315853|gb|EFC54791.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Enterobacter cancerogenus ATCC 35316]
          Length = 308

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDSSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +       +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWIVGASENFSASITTMQLVIWVVTFLAMLALTVFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|171315845|ref|ZP_02905076.1| inner-membrane translocator [Burkholderia ambifaria MEX-5]
 gi|171099034|gb|EDT43819.1| inner-membrane translocator [Burkholderia ambifaria MEX-5]
          Length = 313

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 105/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  S
Sbjct: 22  IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 81

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL  W ++ ++ +I GA G+++    L++      +  L+++     ++        G
Sbjct: 82  YLGLPYWAMLALAPLIVGAFGILVERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 141

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 142 SSGQPYDVPSQLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 191

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 192 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 249

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +                     +     T++ +
Sbjct: 250 ITVFAVVVIGGMGSILGSIITGLLLGVIEGFTRVF--------------YPEASATVVFV 295

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L+R   L  
Sbjct: 296 IMAIVLLIRPAGLFG 310


>gi|119962551|ref|YP_947059.1| branched chain amino acid ABC transporter permease [Arthrobacter
           aurescens TC1]
 gi|119949410|gb|ABM08321.1| putative Branched-chain amino acid transport system, permease
           component [Arthrobacter aurescens TC1]
          Length = 299

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 94/307 (30%), Gaps = 24/307 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + + GLS++ G+ GL +        +GA    +  +        ++  
Sbjct: 15  LVAGLSFGLLLALASVGLSLIFGTTGLTNFAHGEMVTLGAVLVFMFNAFGFPFWLAILLA 74

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                    +         R     +  +++  I   + I++                + 
Sbjct: 75  LVGGGLFGYVQDAGLWRPLRKRGSGLVPMMIVSIGLALAIRYV-----------IQFFFG 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T      +        V       + L+    + A I + L +T +  A R + DN  
Sbjct: 124 GATQQLPGAQSSEIQIGPVSISPNNLWSLIISAVVIALIGIVLLKTRLGKATRAVADNPA 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       + V      + G  +A  R  ++ DM      +++ + V LGG+
Sbjct: 184 LAAASGIDVDSVIRIVWIVGGVLASLGGILWAYYRPGVTFDMGSQIL-LLIFAGVTLGGL 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++      + ++   VEL                           +  + +V+L R   
Sbjct: 243 GTVFGALIGSIVVGIFVELTTVFGLP------------ADLKYVGALFIMIVVLLFRPQG 290

Query: 339 LLRLRTP 345
           +L  R  
Sbjct: 291 ILGRRER 297


>gi|170737605|ref|YP_001778865.1| monosaccharide-transporting ATPase [Burkholderia cenocepacia MC0-3]
 gi|169819793|gb|ACA94375.1| Monosaccharide-transporting ATPase [Burkholderia cenocepacia MC0-3]
          Length = 345

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/326 (12%), Positives = 98/326 (30%), Gaps = 18/326 (5%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           S F     +   +     V+  +              + S+     +  + A   + V+ 
Sbjct: 25  SRFFNPAARQKLLAFASLVLLIVFFSFASSNFLEVDNLVSILQATAVNGVLAVACTYVII 84

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           + G + L+        A    ++ +++G+ + L I  +       G + G    K +   
Sbjct: 85  TSG-IDLSVGTLMTFCAVMAGVVLTKWGMPLPLGILAALCFGALSGCVSGFVIAKMKVPP 143

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                           +    +  G + +    R  +   T              +I  +
Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQDSLIGNLIPAL 191

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +   +L +  ++    + L RT        +  N++A       +   K++ +  S A 
Sbjct: 192 PIPNAVLILFLVAIGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAV 251

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+AG   A+  +   P + +  E   + ++VI      GG  S+        I+  +  
Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTN 311

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               M+       +       +    
Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYV 337


>gi|120611596|ref|YP_971274.1| inner-membrane translocator [Acidovorax citrulli AAC00-1]
 gi|120590060|gb|ABM33500.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 440

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/328 (15%), Positives = 114/328 (34%), Gaps = 18/328 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            +      L  +      +     +M  QI   ++     +I++G  G+LS    +   +
Sbjct: 20  AVVWGLFALALIVAPMLFTSSLALTMLSQIGYLIIICLSYNILLGQGGMLSFGHAVYTGL 79

Query: 77  GAYSYVILGSR-----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           G++  V   +        + + L+  V  +      +++G  + K  G   A+ TL + E
Sbjct: 80  GSFMAVHAMNWAGKGALPVPLVLIPLVGGLAGMFFAVLLGFVTTKKSGTTFAMITLGIGE 139

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +  ++ + +  +  G+ GI                +    F        I +YY++   C
Sbjct: 140 LVASMALMFPEVFGGEGGIT------------TDRVYGKGFFGITFGPAIQVYYLIAAYC 187

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           F+  +++     T +      +RDN +    +       +  AF +S  F G+ GA  A 
Sbjct: 188 FVCTALMFAFTGTPLGRMLNAVRDNPERVEFIGYNTQRVRYYAFIISGFFAGIGGALAAI 247

Query: 252 SRDRIS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           + + ++  D      +   +    LGG T          +L+    L   ++  +   L 
Sbjct: 248 NFEIVTAADSVSVMRSGSYLLFTFLGGATFFFGPIIGAVLLVFASVLLSELSKAWLLYLG 307

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHS 338
                  M     +   + + + +  H 
Sbjct: 308 LVFLFMVMYAPGGIASLIMMNLRVARHG 335


>gi|81300986|ref|YP_401194.1| integral membrane protein of the ABC-type Nat permease for neutral
           amino acids NatD [Synechococcus elongatus PCC 7942]
 gi|81169867|gb|ABB58207.1| integral membrane protein of the ABC-type Nat permease for neutral
           amino acids NatD [Synechococcus elongatus PCC 7942]
          Length = 296

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 92/303 (30%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +  + A GL+++ G L L +        +GAY  ++  S        +   +
Sbjct: 20  INGLATGSLLALAATGLTLIYGILRLTNFAQGEFLTLGAYFTLVANSLGLSLWLAIPLGA 79

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                 C +   +     R   +   TLI+  I  ++ ++   I    AG          
Sbjct: 80  IATIALCLLGEAVLWEPLRRQRVNTTTLIILTIGLSLFLRNLVILIWGAGNQAYRLAVQP 139

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
             T+             +   +    V++G       +   L+RT+I    R I D+   
Sbjct: 140 ALTLWG-----------LRITLNSLLVVIGAAAALVLLHWVLQRTSIGKGMRAIADDPDL 188

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                  +       + ++     +AG  +             ++  + + +  ILGG+ 
Sbjct: 189 ARVSGVPVETVIRWTWVIAGGLTAIAGGLYG--LITAVRPTMGWNLILPLFASAILGGIG 246

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S         IL    EL        +   + F             + L  V+++R   L
Sbjct: 247 SPYGAIAGGLILGFAQELSTYWLPAEYKLAVAF-------------VILIGVLVIRPQGL 293

Query: 340 LRL 342
              
Sbjct: 294 FAR 296


>gi|300691441|ref|YP_003752436.1| branched-chain amino acid ABC transporter membrane component (livH)
           [Ralstonia solanacearum PSI07]
 gi|299078501|emb|CBJ51154.1| putative ABC-type branched-chain amino acid transporter, membrane
           component (livH) [Ralstonia solanacearum PSI07]
          Length = 323

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/321 (15%), Positives = 114/321 (35%), Gaps = 27/321 (8%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
            + +     L+  M + GL+++   +G+L+      Y +GAY   ++ +      W  + 
Sbjct: 15  NLLNGVSYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYVISAHL--GFWAALI 72

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            + ++ GA G ++    L+    Y  +A L+ +     ++ +   +  G         L 
Sbjct: 73  AAPLLVGALGALVERFGLRTVHRYGHVAELLFTFGLAYLIEEGVKLVWG---------LP 123

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   V   +    F      +  +  +++L    +   I L L RT I    +    + 
Sbjct: 124 AVPYRVPEALDGPLFTLFTSSFPKYRAFMMLVSLLMLVGIFLLLTRTRIGLVIQAALTHP 183

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +L   +    +  F    A  G+AG         ++      +   IV  + ++GG
Sbjct: 184 DMVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NAFVTEPSMAAAVGSIVFVVAVVGG 241

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL------- 330
           M SL     A+ ++  +      ++    + L K   + N     + V +L +       
Sbjct: 242 MGSLVGAFVASLLIGCIQTFAVTLDLSVASLLGKLGVTLNPDVPLISVWSLTIAQVAPVL 301

Query: 331 -------VILMRSHSLLRLRT 344
                  +++ R   L+  R 
Sbjct: 302 PYLLLVLMLIFRPRGLMGTRE 322


>gi|260425460|ref|ZP_05779440.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Citreicella sp. SE45]
 gi|260423400|gb|EEX16650.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Citreicella sp. SE45]
          Length = 290

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 107/307 (34%), Gaps = 26/307 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ +  +    YV+ A GL+++ G LG+++      Y +G ++ + L +  GL + + +
Sbjct: 6   QYLANGIVVGSSYVLVAVGLTLIFGILGIVNFAHGEFYMLGGFAGIGLATVLGLPLIVSL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                 +   G +      +   D     +++ S     +L     +  G   +      
Sbjct: 66  LGVVAFAALLGFLAEQILNRQVKDKDPTNSIVSSFGLAVVLQNAALLLIGPQPML----- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +R+ +         V   +    + + M  L  ++ L LR T +  + R +   
Sbjct: 121 ------LRTDLSMVPVEIGPVYLPLQRALIPVAMIVLVGALHLLLRYTWVGMSLRAMAQQ 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                     +    +  F   + F G+AG   ++        +      +   ++VILG
Sbjct: 175 PTVARMCGIRVSRVAIVTFMTGAVFAGVAGFLMSSVFMV--HPLIGNMIVLKAFTVVILG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM S++  A A  +L  V  +                   N     +  + + +V+L   
Sbjct: 233 GMGSVTGAAAAGLMLGIVESMTSAYLG-------------NGLRDIVGFLMVVIVLLAWP 279

Query: 337 HSLLRLR 343
             +   +
Sbjct: 280 QGIFGRK 286


>gi|171912954|ref|ZP_02928424.1| Ribose transport system permease protein [Verrucomicrobium spinosum
           DSM 4136]
          Length = 328

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 96/313 (30%), Gaps = 18/313 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +  + LL +   ++  L           +++   + +Y +    ++ V+   G + L+
Sbjct: 2   KKNLGISLLLLFVCVVTSLVNPNFLIPYNAENLVNWVSLYAIIGLAVTFVI-ITGGIDLS 60

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +       L    G  + + + V+A +S + G++ GL   K +     +     
Sbjct: 61  IGSVVGLVGTVLGWLLVEKGWPVPVALVVTAALSASIGLVHGLLITKVKLQPFVVTLCG- 119

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                               +     L F               +     +  +   L+ 
Sbjct: 120 ----------LLIYRGVARWLVHDGTLGFGTAYDGQRWFANGRIALPFFGDYRLPAPLII 169

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  ++    ++L +T        +  N++A            + ++ + S   G+ G  F
Sbjct: 170 LAVIAGLAAVFLNKTVWGRHLFALGRNEEAARYSGIRTDRLVILSYVLCSTLAGIGGILF 229

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNF 303
           A   + + P        +  I+  +LGG        S+  +   TA++  ++     +  
Sbjct: 230 ALDVNTVQPASQGNFYELYAIAAAVLGGCSLRGGEGSVIGVLIGTALIRVLLNAINILGI 289

Query: 304 YYFNSLLKFDCSF 316
                 +      
Sbjct: 290 ATQLEFVVLGMVI 302


>gi|218781509|ref|YP_002432827.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218762893|gb|ACL05359.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 434

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/310 (13%), Positives = 91/310 (29%), Gaps = 24/310 (7%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y        L+ +M    L+++ G +G  S +     A+GAY+  +       +    
Sbjct: 139 SAYRVMTLKFTLVAIMLTLSLNVINGYMGEFSCSHPGFMALGAYAASVFTLVLFTNDRFF 198

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
                  S           +      L    +          I           I     
Sbjct: 199 GEAVLSPSLGVYFFPVAIIIGGFTAALGALVIA---------IPSFRTRGDYLAIISLAF 249

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           ++ + + + +L                   ++ G   L   +I    R+ +  A   +RD
Sbjct: 250 MFIVKSLIENLEVVGGPRGLGSQPNYASLPMVFGWTVLCIWVINNFVRSTLGKALNAVRD 309

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++ A  ++       K+  F   + + G AG  FA     ++P  F       ++++V  
Sbjct: 310 DESAADAMTVNTRRTKMVGFLFGAFWAGAAGGLFAHILRYVNPASFGLQRLAEILAMVYF 369

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S+         +  + E    +  + +  +                     V++ R
Sbjct: 370 GGLNSVHGSIVGAVSISLLGEALRPLELFKWIIIPLLLIL---------------VMIFR 414

Query: 336 SHSLLRLRTP 345
              L+  +  
Sbjct: 415 PTGLIAFKEF 424


>gi|320158359|ref|YP_004190737.1| ribose ABC transport system, permease RbsC [Vibrio vulnificus
           MO6-24/O]
 gi|319933671|gb|ADV88534.1| ribose ABC transport system, permease protein RbsC [Vibrio
           vulnificus MO6-24/O]
          Length = 328

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 96/312 (30%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 30  LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 88

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   ++        + + + +P + +     G I G+   K +        + M+     
Sbjct: 89  LCG-AFAASLVAMEVPVLIAVPTALLAGATLGAISGIIIAKGKVQAFIATLVTMT----- 142

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G   +Y   R    G T  +    +      +   + ++ +++       
Sbjct: 143 -------LLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVVVFAAAWY 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +      T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 196 LL----NHTRFGRYVYALGGNESATRLSGINVDKVKIGVYAICGLLAALAGIIVTSRLSS 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 252 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 311

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 312 AKAAVILLAVMV 323


>gi|317154714|ref|YP_004122762.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2]
 gi|316944965|gb|ADU64016.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2]
          Length = 300

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 82/304 (26%), Gaps = 18/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      +Y + A G ++V G + L++      +A G Y  VI  S            
Sbjct: 8   FINGLTLGGVYALIALGYTMVYGIIQLINFAHGEFFAAGGYMGVIFISWLAAQGVHPYLC 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +      +   L ++                      +             +      
Sbjct: 68  LGIGLVLAMLYCALLAMAVERLAYRPLRQASRLAVLLSALGMSIF----LQNGLMLTQGQ 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 + I    F    +        ++    FL  ++ L + +T I  A R    ++ 
Sbjct: 124 YDVAYPTEITAGGFQLGGLYISYMQCLIVALTAFLLLALNLLVFKTRIGKAMRATAQDKV 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           FA+ +     AG         +S  M  F   I   +  +LGG+
Sbjct: 184 MSALVGINANHIIALTFAIGAGLAAAAGIMVGLYYGTVSYSM-GFVPGIKAFAAAVLGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +++       I+  V     G     +  +  F             + L  V+  +   
Sbjct: 243 GNITGAMLGGLIIGMVEIFAAGYISGEYKDVFAF-------------VILIAVLYFKPTG 289

Query: 339 LLRL 342
           ++  
Sbjct: 290 IMGE 293


>gi|188535381|ref|YP_001909178.1| branched-chain amino acid transporter permease subunit LivH
           [Erwinia tasmaniensis Et1/99]
 gi|188030423|emb|CAO98317.1| High-affinity branched-chain amino acid transport system permease
           protein [Erwinia tasmaniensis Et1/99]
          Length = 308

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 96/312 (30%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDTSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                  V+ +I+   G  +   + +       +  LI +      L  +  +T G    
Sbjct: 72  LISCGFVVAVVIASCYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTQGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L + V                      +         ++ L++R + +  A 
Sbjct: 129 ----RDLALPSLVTGQWTLGVSNGFAATISTMQMVIWGVTFLAMLALTLFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFLAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L +
Sbjct: 244 TAAVLGGIGSIPGAMLGGLILGIAEALTSAYLSTEYKDVVSF-------------ALLIV 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|304397874|ref|ZP_07379750.1| inner-membrane translocator [Pantoea sp. aB]
 gi|304354585|gb|EFM18956.1| inner-membrane translocator [Pantoea sp. aB]
          Length = 308

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 85/305 (27%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +       +
Sbjct: 12  MLNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDTGWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
                    +++                     +   I  I           +    R  
Sbjct: 72  MIAAGFVMAILISSAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + +                      + +       ++  ++R + +  A R   ++ 
Sbjct: 132 ALPSLITGQWTVGESNGFAATISTMQVVIWVVTFLAMLALTTFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +AG         I+     F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGSIN-PFIGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L     L        +  ++ F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|107025686|ref|YP_623197.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054]
 gi|116693132|ref|YP_838665.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
 gi|254250041|ref|ZP_04943361.1| Inner-membrane translocator [Burkholderia cenocepacia PC184]
 gi|105895060|gb|ABF78224.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia cenocepacia AU 1054]
 gi|116651132|gb|ABK11772.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia cenocepacia HI2424]
 gi|124876542|gb|EAY66532.1| Inner-membrane translocator [Burkholderia cenocepacia PC184]
          Length = 345

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/326 (12%), Positives = 98/326 (30%), Gaps = 18/326 (5%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           S F     +   +     V+  +              + S+     +  + A   + V+ 
Sbjct: 25  SRFFNPAARQKLLAFASLVLLIVFFSFASSNFLEVDNLVSILQATAVNGVLAVACTYVII 84

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           + G + L+        A    ++ +++G+ + L I  +       G + G    K +   
Sbjct: 85  TSG-IDLSVGTLMTFCAVMAGVVLTKWGMPLPLGILAALCFGALSGCVSGFVIAKMKVPP 143

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                           +    +  G + +    R  +   T              +I  +
Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQDSLIGNLIPAL 191

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +   +L +  ++    + L RT        +  N++A       +   K++ +  S A 
Sbjct: 192 PIPNAVLILFLVAIGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAV 251

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+AG   A+  +   P + +  E   + ++VI      GG  S+        I+  +  
Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTN 311

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               M+       +       +    
Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYV 337


>gi|254695177|ref|ZP_05157005.1| Bacterial inner-membrane translocator [Brucella abortus bv. 3 str.
           Tulya]
 gi|261215535|ref|ZP_05929816.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya]
 gi|260917142|gb|EEX84003.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya]
          Length = 406

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 55/315 (17%), Positives = 112/315 (35%), Gaps = 34/315 (10%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                + + +  IQ+LI  +FA   S++ G  G+LS      + +G+++ V + + +G  
Sbjct: 20  PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAAYFGLGSFAAVHVMNAFGGE 79

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGD----YLAIATLIMSEIFQNILIKWKPITNGK 147
             L  P+  +     G++ GL +  F       Y A  TL ++E+   +    K    G+
Sbjct: 80  GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAKITLALAELLHALAPHLKGTFGGE 139

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
           AG+       +      +                 +YY+ L     S  ++  L  T   
Sbjct: 140 AGVSSFRMPAWGFDFGSTTE---------------VYYLALAWVVGSILLLFLLTLTPFG 184

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +R+N      L   +       FA+S+ F G+AGA  A + +  +  +F+   + 
Sbjct: 185 RVTVGLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGIST 244

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            V+    + G+ +    A   A +     +   +   +                    + 
Sbjct: 245 AVVLNSFIDGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLI 289

Query: 328 LFLVILMRSHSLLRL 342
             LV++     L+  
Sbjct: 290 FVLVMMFLPRGLVGE 304


>gi|166362958|ref|YP_001655231.1| amino acid transport system permease protein [Microcystis
           aeruginosa NIES-843]
 gi|166085331|dbj|BAG00039.1| amino acid transport system permease protein [Microcystis
           aeruginosa NIES-843]
          Length = 287

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 92/292 (31%), Gaps = 12/292 (4%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
           + + + +      I  + A GL++  G L L +        +GAY   ++ ++       
Sbjct: 3   TPQLLFNGLAVGSIIALAAVGLTLTCGILRLSNFAHGDFMTLGAYITWVVNAQGINLWLA 62

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
           ++  +A+ + A  +   L     R       TLI+  I   + ++   +          D
Sbjct: 63  MLVGAAVTAIAMLIAERLLWKPMRDRRADSTTLIIISIGLALFLRNGILMIWGGSNQRYD 122

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                 T               +        V+     +  ++ L L++T I  A R + 
Sbjct: 123 LPVMTAT-----------EIFGIKVAFDRLLVIGLAIIVIIALHLLLQKTKIGKAMRAVA 171

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           D+          + +     + ++     +AGA F      +      +   + + + VI
Sbjct: 172 DSTDLARVTGINVEWVVFWTWIITGVLTALAGAMFGLITGGV-RPNMGWFLILPMFAAVI 230

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           LGG+ +         I+    E+   +    +   +       +       +
Sbjct: 231 LGGIGNPYGAIAGALIIGVAQEISVPLIGSDYKLAVALLIMILLLLFRPQGL 282


>gi|197118569|ref|YP_002138996.1| branched-chain amino acid ABC transporter membrane protein
           [Geobacter bemidjiensis Bem]
 gi|197087929|gb|ACH39200.1| branched-chain amino acid ABC transporter, membrane protein
           [Geobacter bemidjiensis Bem]
          Length = 294

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 93/305 (30%), Gaps = 26/305 (8%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            +++ S      IY +     +I+  S G+++        +G    +   +   L +   
Sbjct: 8   SQFVISGLATGAIYALIGLSFAIIFNSTGIINFAQGEFVMLGGVLTIFCINALQLPLLAA 67

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           I  +   +   G++    +++   +   +A +I++     ++     +  GK        
Sbjct: 68  ICAAVAGTTVIGLVFERLAIRPLKNATPLALIIITIGASILIRGVVMLLWGKD------- 120

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                  + +         +         ++      +     L+   T    A R    
Sbjct: 121 ----TKALPAFSGNDPISVAGATLLPQHLWIFGVTILVIVGCRLFFHHTISGKAMRACSF 176

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N +A   +  ++    L +F +S+A   +AG   A                +      I+
Sbjct: 177 NPRAANLVGVSVGRMVLFSFVISAAVGSLAGVIIAPLTMTA--YDVGVMLGLKGFCAAIM 234

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S         IL  +  L  G+    +   + F               L L++ +R
Sbjct: 235 GGMGSGLGTVLGGLILGALESLGAGLISSGYKDAIAFC-------------ILLLILFIR 281

Query: 336 SHSLL 340
              L 
Sbjct: 282 PQGLF 286


>gi|261250789|ref|ZP_05943363.1| ribose ABC transport system permease protein RbsC [Vibrio
           orientalis CIP 102891]
 gi|260937662|gb|EEX93650.1| ribose ABC transport system permease protein RbsC [Vibrio
           orientalis CIP 102891]
          Length = 327

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/312 (9%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  I  + A G+++V+ + G + L+     A
Sbjct: 29  LIALLFLIVVVSFLNPNFFTVDNILNILRQTSINAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +     +  +       +    +   + +                + F  
Sbjct: 88  LCGAFAASLIAMEVPVLIAVPTALFAGAALGAISGVIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVIVFASVWYV 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLV 322


>gi|149915303|ref|ZP_01903831.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter sp. AzwK-3b]
 gi|149811024|gb|EDM70863.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter sp. AzwK-3b]
          Length = 336

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/334 (11%), Positives = 86/334 (25%), Gaps = 19/334 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG--------- 77
            L      +   +           + A G++++ G L   +       A G         
Sbjct: 3   ILNALVALANFVLVPALAYGSQLALGALGVTLIYGILRFSNFAHGDTMAFGTMVTILVTW 62

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A     +G     +  L +P   +   A  ++      +F     A   +++      + 
Sbjct: 63  AMQAAGIGLGPLPTALLALPFGILGCMALVLVTDRVVYRFYRVQKAKPVILVIVSIGVMF 122

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I    +                        +        +         ++    + A +
Sbjct: 123 ILNGLVRFVIGPDDQRFADGERFIISARTFKEMTGLEEGLAIRTTQGITVVTAVIVVALL 182

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L RT    + R   DN+              +  + + +A   +AG  +   +    
Sbjct: 183 FWFLNRTRTGKSMRAYSDNEDLALLSGINPDRVVMVTWLIVAALATVAGVLYGLDKSF-- 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309
                F   + V +  I+GG+ +         I+             +   +        
Sbjct: 241 KPFTYFQLLLPVFASAIVGGLGNPLGAIAGGFIIAFSEVTITYAWKKVLGYVMPEGLEPE 300

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                        +  + L +V+L R   L R +
Sbjct: 301 GLVQLLSTDYKFAVSFVILLIVLLFRPTGLFRGK 334


>gi|260907108|ref|ZP_05915430.1| inner-membrane translocator [Brevibacterium linens BL2]
          Length = 290

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 107/302 (35%), Gaps = 27/302 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
             +  I  + A G  ++  + G+++        IGAY++        L I +   V  + 
Sbjct: 12  LSEGAILALAALGFVLIYKATGVINFAQGEFLLIGAYTFYTAFVILRLPIVVAALVGVVA 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +   G+++    L+       I+ ++++     +L     +  G     +          
Sbjct: 72  AVIIGVLVERFILRPMVGQSHISIIMVTIGLAGLLSALVQMFFGTQPRSMPPLFPRTQ-- 129

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                                 +VLL    +   + L+ +R+    A R + D+Q+A  +
Sbjct: 130 ---------LEILGAHIPANRLWVLLVAGIVLTLLTLFFQRSKHGIAMRAVADDQQAAMT 180

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +  ++      ++A+++    +AG   A   D  + +M   +  ++V  +VILGG+ S+ 
Sbjct: 181 VGISVRRVFALSWALAAVSALIAGILLA---DVTTVEMNLVNFGLLVFPVVILGGLDSVP 237

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   +  + +   G        +                I L L++L+R + +   
Sbjct: 238 GTIVGGLTIGLISQFVAGYLDPGLAEVAP-------------YIVLVLILLVRPYGVFGE 284

Query: 343 RT 344
           + 
Sbjct: 285 KR 286


>gi|331685101|ref|ZP_08385687.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli H299]
 gi|331077472|gb|EGI48684.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli H299]
          Length = 308

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|302541670|ref|ZP_07294012.1| ribose ABC transporter, permease [Streptomyces hygroscopicus ATCC
           53653]
 gi|302459288|gb|EFL22381.1| ribose ABC transporter, permease [Streptomyces himastatinicus ATCC
           53653]
          Length = 340

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 98/312 (31%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  +   ++ F+      +Q  + ++  Q  +  + A G++ V+  +G + L+     A
Sbjct: 40  ALGLLAMCVVFFIATPYFLTQSNLLNIVDQTAVLGLLALGMTAVI-VMGGIDLSVGATLA 98

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L    G  +WL    +  ++GACG+  GL     +      ATL M  I + 
Sbjct: 99  LATMVVGWLSHDQGWPLWLSAVAAIAVAGACGLANGLGITYTKLPPFI-ATLAMMSIARG 157

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +            G  +     +                S + Y          +  L  
Sbjct: 158 LANVI------TDGQQIVGFPDWFD------------NLSTIRYVGVFTVCTAVLAALYV 199

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +   ++R  +   A   +  + +        +    +  + V+    G+AG F     D 
Sbjct: 200 AGWAYMRYRSGGRALYAMGGSAEVARLAGIKVKQRTVLVYTVTGLLAGLAGVFLTMRLDS 259

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++VI      GG+ S++       I+  +      +    F   +
Sbjct: 260 SQPSAGTGYELDTIAAVVIGGASLSGGVGSITGTLIGVLIIGVLRNGLNLLGVSPFIQQI 319

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 320 VIGLVIALAVML 331


>gi|146319201|ref|YP_001198913.1| branched chain amino acid ABC transporter permease [Streptococcus
           suis 05ZYH33]
 gi|146321404|ref|YP_001201115.1| branched chain amino acid ABC transporter permease [Streptococcus
           suis 98HAH33]
 gi|253752244|ref|YP_003025385.1| branched-chain amino acid transport system permease protein
           [Streptococcus suis SC84]
 gi|253754070|ref|YP_003027211.1| branched-chain amino acid ABC transporter permease [Streptococcus
           suis P1/7]
 gi|253756004|ref|YP_003029144.1| branched-chain amino acid transport system permease protein
           [Streptococcus suis BM407]
 gi|145690007|gb|ABP90513.1| Branched-chain amino acid ABC-type transport system, permease
           component [Streptococcus suis 05ZYH33]
 gi|145692210|gb|ABP92715.1| Branched-chain amino acid ABC-type transport system, permease
           component [Streptococcus suis 98HAH33]
 gi|251816533|emb|CAZ52169.1| branched-chain amino acid transport system permease protein
           [Streptococcus suis SC84]
 gi|251818468|emb|CAZ56297.1| branched-chain amino acid transport system permease protein
           [Streptococcus suis BM407]
 gi|251820316|emb|CAR46835.1| branched-chain amino acid transport system permease protein
           [Streptococcus suis P1/7]
 gi|292558835|gb|ADE31836.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus suis GZ1]
 gi|319758633|gb|ADV70575.1| branched chain amino acid ABC transporter permease [Streptococcus
           suis JS14]
          Length = 295

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 100/303 (33%), Gaps = 19/303 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L +      ++    
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDLYMMGAFMGYFLLNNLT---FIADGG 61

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +         ++G   L    ++LA   L  S     ++         +    +      
Sbjct: 62  TRFFVALILAMVGTAILGVVIEFLAYRPLRNSTRIAALITAIGVSFFLE--YTMIKFFTA 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    F    V        +L     L  ++ L ++RT +  A R +  +  
Sbjct: 120 DVKAFPQAIEAVTFNLGPVSVTNIQLIILGVSLALMVALQLIVKRTKMGKAMRAVSVDSD 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG       ++I P M   +  +      +LGG+
Sbjct: 180 AAQLMGINVNRTISFTFALGSALAGAAGVLLGLYYNQIEPLM-GMTPGLKAFVAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++  +                 +   F+     ++   L +++L+R   
Sbjct: 239 GIIPGAALGGFVIGIIET-------------FTYVIEFDTFRDAIVYTVLIIILLVRPSG 285

Query: 339 LLR 341
           +L 
Sbjct: 286 ILG 288


>gi|330837343|ref|YP_004411984.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Spirochaeta coccoides DSM 17374]
 gi|329749246|gb|AEC02602.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Spirochaeta coccoides DSM 17374]
          Length = 646

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/314 (10%), Positives = 83/314 (26%), Gaps = 19/314 (6%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           L      G   S   I ++  Q  + + +A G++ ++   G   L+     A+GA    +
Sbjct: 328 LASVSGSGNLFSLPNILTILEQSSVRMFYALGVAGLILLAG-TDLSVGRMVALGAVLTGL 386

Query: 84  L-------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY--LAIATLIMSEIFQ 134
           +        + + +  W    +  ++     M + +        +  +  A L +     
Sbjct: 387 ILHPGTNIVTLFKMGPWDFSTIPMVVRVLMAMSISVVLCVLFSTFAGVFTARLRIHPFIS 446

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  +         G           T ++  +             I    +++      
Sbjct: 447 TLATQLIIYGLLFFGTSGTPVGSIDST-IKDALGGRWILGFVNGELITFPKLIIPAAIAV 505

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                   +T        +  N +A      ++    L  F ++  F G+   F A   +
Sbjct: 506 IVAWFIWNKTTFGKNMYAVGGNSEAASVSGISVFKVTLKVFIMAGVFYGLGAFFEAFRAN 565

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                       +  I+  ++      GG+  +        I  G+      +       
Sbjct: 566 A--SAGTGQGYELDAIAACVVGGISFNGGIGKIGGAVIGVIIFTGLTYCLTFLGIDTNLQ 623

Query: 309 LLKFDCSFNMRHTT 322
            +            
Sbjct: 624 FVFKGFIIIAAVAL 637


>gi|311105599|ref|YP_003978452.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310760288|gb|ADP15737.1| inner-membrane translocator 26 [Achromobacter xylosoxidans A8]
          Length = 296

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/307 (15%), Positives = 93/307 (30%), Gaps = 19/307 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +  I  L Y + A GL+++ G L +++      Y IGAY+Y ++    G+  WL +P+
Sbjct: 7   FVNGLIIGLYYALMAVGLTMIFGILKVVNFAHGEFYMIGAYTYTLVSLALGVPPWLALPI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A      G          R  Y    +  + +    +++ +         +      Y 
Sbjct: 67  AAAAGALLGWATER--WLMRPLYAGYGSWGLMKDEYAVVVTFGLSLLLINLVDKVVGPYP 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +     S +         +  +  +   L  +      + L+++R+      + +  N+ 
Sbjct: 125 MRGPALSDVTRMAVGPFMMSGQKLITAGLSIVLL--IGLALFIKRSLWGRQVQAVAQNRL 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                      A    F  S     +AGA  A   +            I    IV++GGM
Sbjct: 183 GASIAGIDTARASSIIFMASGVLAALAGALLAPVIN--PAPDVGAFPAIKSYVIVVIGGM 240

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A   L  +         Y +           +                R   
Sbjct: 241 GSIPGSIVAALALGVLESFGAVYLSYDYRDTFGLALLILILL-------------FRPKG 287

Query: 339 LLRLRTP 345
           L   R  
Sbjct: 288 LFGERAR 294


>gi|238019547|ref|ZP_04599973.1| hypothetical protein VEIDISOL_01416 [Veillonella dispar ATCC 17748]
 gi|237864246|gb|EEP65536.1| hypothetical protein VEIDISOL_01416 [Veillonella dispar ATCC 17748]
          Length = 293

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 100/308 (32%), Gaps = 27/308 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GL++V G L ++++     + IGA+  + + + + ++I++ + V
Sbjct: 6   LVNGLTLGSLYAVLAIGLTLVFGVLNIINMAHGGIFMIGAFVGLFMVTVFDVNIFVALIV 65

Query: 99  SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           +  +    G ++   +     +     +A LI +      L     +  G          
Sbjct: 66  AMAVGAILGYLLEFVALRPLRKKKVSHLAPLISTIGVSIFLESLALLLWGPQTRSFPPDY 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   +            +  + M  + + +           ++T I  A R +  +
Sbjct: 126 IGGLIDFGAFKISMVQIIGLGVSVVLMLILNVVI-----------KKTKIGKAIRAVSMS 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    L             ++SA    AG     S + I P M         ++++ILG
Sbjct: 175 TETAALLGINPTMIISVTVMIASALGAAAGVLVGLSFNAIEPTM-GVIIGFKGLAVLILG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +++       IL              F   + F               + L++  R 
Sbjct: 234 GLGNITGAMVGGFILGVAEIFSVAYGASTFRDAVAFG-------------LIILLLFWRP 280

Query: 337 HSLLRLRT 344
             L   + 
Sbjct: 281 QGLFGSKD 288


>gi|16762740|ref|NP_458357.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Typhi str.
           CT18]
 gi|16766849|ref|NP_462464.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. LT2]
 gi|29144227|ref|NP_807569.1| branched-subunit Amino acid transporter permease LivH [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|56415462|ref|YP_152537.1| branched-subunit Amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|161616608|ref|YP_001590573.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Paratyphi B
           str. SPB7]
 gi|167990776|ref|ZP_02571875.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168235154|ref|ZP_02660212.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168241712|ref|ZP_02666644.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168260710|ref|ZP_02682683.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168465159|ref|ZP_02699051.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168818623|ref|ZP_02830623.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194443794|ref|YP_002042808.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194448834|ref|YP_002047588.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|194734280|ref|YP_002116497.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197262181|ref|ZP_03162255.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197364392|ref|YP_002144029.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. AKU_12601]
 gi|198243928|ref|YP_002217521.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|200388482|ref|ZP_03215094.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204928629|ref|ZP_03219828.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205354819|ref|YP_002228620.1| branched-chain amino acid transporter permease LivH [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|207858801|ref|YP_002245452.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
 gi|213419306|ref|ZP_03352372.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E01-6750]
 gi|213426838|ref|ZP_03359588.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E02-1180]
 gi|213649992|ref|ZP_03380045.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Typhi str.
           J185]
 gi|213865194|ref|ZP_03387313.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Typhi str.
           M223]
 gi|289829440|ref|ZP_06547052.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-3139]
 gi|61227648|sp|P0A2J1|LIVH_SALTY RecName: Full=High-affinity branched-chain amino acid transport
           system permease protein livH; AltName: Full=LIV-I
           protein H
 gi|61227649|sp|P0A2J2|LIVH_SALTI RecName: Full=High-affinity branched-chain amino acid transport
           system permease protein livH; AltName: Full=LIV-I
           protein H
 gi|25301321|pir||AG0992 high-affinity branched-chain amino acid transport system permease
           protein STY4249 [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|217072|dbj|BAA02129.1| LivA protein [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|16422123|gb|AAL22423.1| high-affinity branched-chain amino acid transporter [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|16505046|emb|CAD08067.1| high-affinity branched-chain amino acid transport system permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29139864|gb|AAO71429.1| high-affinity branched-chain amino acid transport system permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|56129719|gb|AAV79225.1| high-affinity branched-chain amino acid transport system permease
           protein [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|161365972|gb|ABX69740.1| hypothetical protein SPAB_04425 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402457|gb|ACF62679.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194407138|gb|ACF67357.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194709782|gb|ACF89003.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195632289|gb|EDX50773.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197095869|emb|CAR61443.1| high-affinity branched-chain amino acid transport system permease
           protein [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|197240436|gb|EDY23056.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197291326|gb|EDY30678.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197938444|gb|ACH75777.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199605580|gb|EDZ04125.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204322062|gb|EDZ07260.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205274600|emb|CAR39650.1| high-affinity branched-chain amino acid transport system permease
           protein [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205330826|gb|EDZ17590.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205339037|gb|EDZ25801.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205344497|gb|EDZ31261.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205350402|gb|EDZ37033.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206710604|emb|CAR34962.1| high-affinity branched-chain amino acid transport system permease
           protein [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|261248716|emb|CBG26554.1| high-affinity branched-chain amino acid transport system permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267995792|gb|ACY90677.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 14028S]
 gi|301160103|emb|CBW19623.1| high-affinity branched-chain amino acid transport system permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312914587|dbj|BAJ38561.1| branched-chain amino acid ABC transporter permease protein LivH
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. T000240]
 gi|320087973|emb|CBY97735.1| High-affinity branched-chain amino acid transport system permease
           protein livM LIV-I protein M [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|322614070|gb|EFY11006.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315996572]
 gi|322617962|gb|EFY14855.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-1]
 gi|322625424|gb|EFY22250.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-3]
 gi|322629889|gb|EFY26662.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-4]
 gi|322632222|gb|EFY28973.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-1]
 gi|322636427|gb|EFY33134.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-2]
 gi|322643176|gb|EFY39749.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 531954]
 gi|322644717|gb|EFY41253.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. NC_MB110209-0054]
 gi|322651261|gb|EFY47645.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. OH_2009072675]
 gi|322652826|gb|EFY49165.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. CASC_09SCPH15965]
 gi|322659128|gb|EFY55380.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 19N]
 gi|322663170|gb|EFY59374.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 81038-01]
 gi|322668657|gb|EFY64810.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MD_MDA09249507]
 gi|322674540|gb|EFY70633.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 414877]
 gi|322678255|gb|EFY74316.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 366867]
 gi|322682489|gb|EFY78510.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 413180]
 gi|322684202|gb|EFY80208.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 446600]
 gi|323131922|gb|ADX19352.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 4/74]
 gi|323192243|gb|EFZ77475.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609458-1]
 gi|323196330|gb|EFZ81482.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556150-1]
 gi|323201868|gb|EFZ86931.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609460]
 gi|323206411|gb|EFZ91372.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 507440-20]
 gi|323212004|gb|EFZ96831.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556152]
 gi|323216909|gb|EGA01632.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB101509-0077]
 gi|323222309|gb|EGA06692.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB102109-0047]
 gi|323224323|gb|EGA08612.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB110209-0055]
 gi|323228251|gb|EGA12382.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB111609-0052]
 gi|323233481|gb|EGA17574.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009083312]
 gi|323237057|gb|EGA21124.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009085258]
 gi|323243728|gb|EGA27744.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315731156]
 gi|323246030|gb|EGA30017.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2009159199]
 gi|323250806|gb|EGA34684.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008282]
 gi|323255817|gb|EGA39567.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008283]
 gi|323261907|gb|EGA45474.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008284]
 gi|323267701|gb|EGA51183.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008285]
 gi|323268581|gb|EGA52048.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008287]
 gi|326625302|gb|EGE31647.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Dublin str.
           3246]
 gi|326629963|gb|EGE36306.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 9]
 gi|332990414|gb|AEF09397.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. UK-1]
          Length = 308

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFIGAIIIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWIVGSSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|329295843|ref|ZP_08253179.1| branched-chain amino acid transporter permease subunit LivH
           [Plautia stali symbiont]
          Length = 308

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 86/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDTSWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
                    +I+                     +   I  I           +    R  
Sbjct: 72  MIAAGFVMAVIISSAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + +                      + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLITGQWTLGESNGFAATLTTMQLVIWVVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +AG         I+     F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGSIN-PFIGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L     L        +  ++ F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|294793493|ref|ZP_06758630.1| branched-chain amino acid ABC transporter, permease protein
           [Veillonella sp. 3_1_44]
 gi|294455063|gb|EFG23435.1| branched-chain amino acid ABC transporter, permease protein
           [Veillonella sp. 3_1_44]
          Length = 293

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 100/308 (32%), Gaps = 27/308 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GL++V G L ++++     + IGA+  + + + + ++I++ + V
Sbjct: 6   LVNGLTLGSLYAVLAIGLTLVFGVLNIINMAHGGIFMIGAFVGLFMVTVFDVNIFVALIV 65

Query: 99  SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           +  +    G I+   +     +     +A LI +      L     +  G          
Sbjct: 66  AMAVGAILGYILEFVALRPLRKKKVSHLAPLISTIGVSIFLESLALLLWGPQTRSFPPDY 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   +            +  + M  + + +           ++T I  A R +  +
Sbjct: 126 IGGLIDFGAFKISMVQIIGLGVSVVLMLILNVVI-----------KKTKIGKAIRAVSMS 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    L             ++SA    AG     S + I P M         ++++ILG
Sbjct: 175 TETAALLGINPTMIISITVMIASALGAAAGVLVGLSFNAIEPTM-GVIIGFKGLAVLILG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +++       IL              F   + F               + L++  R 
Sbjct: 234 GLGNITGAMVGGFILGVAEIFSVAYGASTFRDAVAFG-------------LIILLLFWRP 280

Query: 337 HSLLRLRT 344
             L   + 
Sbjct: 281 QGLFGSKD 288


>gi|170767119|ref|ZP_02901572.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia albertii TW07627]
 gi|170124557|gb|EDS93488.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia albertii TW07627]
          Length = 308

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMLGIDTGWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAEGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|147672299|ref|YP_001214850.1| ribose ABC transporter permease protein [Vibrio cholerae O395]
 gi|146314682|gb|ABQ19222.1| ribose transport system permease protein RbsC [Vibrio cholerae
           O395]
          Length = 322

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 24  LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +     +  +       +    +   + +                + F  
Sbjct: 83  LCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 131 TLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYL 190

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 191 L-----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 245

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 246 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 305

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 306 AKAVVILLAVLV 317


>gi|115526590|ref|YP_783501.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115520537|gb|ABJ08521.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 308

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 94/301 (31%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   +Y++ A GL+I+ G +G++++       +GAY   +  S +   +  L      +
Sbjct: 22  LILFSVYLLMALGLAIIFGQMGVINMAHGEFMILGAYVTWLTSSAFQAYLPSLFAGYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     I            L     +       +L  W      +           +G  
Sbjct: 82  AMILAFIAAGALGMLVEWGL--IRFLYKRPLDTLLATWGLSLILQQTYRSVFGAREVGVD 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +   +  +  +   I   +V+     ++A++   + ++      R +  N+    +
Sbjct: 140 LPQWMLGSKQITDTIEVPINGIFVMCLTVLITAAVAYIMYKSRWGRQVRAVMQNRVMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +         + F +     G+AG+ F       +         +    +V+ GG  SL 
Sbjct: 200 VGINTEKVDRATFGLGCGIAGVAGSAFTMIGS--TGPTSGQLYIVDTFLVVVFGGAASLF 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++A+  ++++R   L  L
Sbjct: 258 GTIASAFSISQAQSTMEFFMSGSMAK-------------VLTLLAIVAILMVRPQGLFAL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|213969637|ref|ZP_03397773.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
 gi|213925733|gb|EEB59292.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
          Length = 293

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 93/303 (30%), Gaps = 17/303 (5%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +      + ++ A GL+I+ G +G++++       +GAY+  +L +     +  + P   
Sbjct: 5   NGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTVGAYTTYVLSTLVQTYMPSMQPYYF 64

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
             + A   ++             + + +       +L  W      +  +        + 
Sbjct: 65  FFAIALSFVVAGSIGWVVER--VMISRLYHRPLDTLLATWGLSLVMQQALRSIFGAREVS 122

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                 +      S  +       +V+     L+  I L L RT      R    N+   
Sbjct: 123 ANPPEWLMGAVSLSDTIEIPRNGLFVMALTVLLTCGIFLMLYRTRWGLHVRATVQNRVMS 182

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++           FA+     G+AGA  A +    +         +    +V+ GG  S
Sbjct: 183 RAVGINTREVDRMTFALGCGVAGVAGA--AFTTIGSTGPTAGSLYIVDTFLVVVFGGAQS 240

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L     +   +     +           +L                A+ L++LMR   L 
Sbjct: 241 LLGTIASAFTIAQTQSIAEFFMSGSMAKVLTLS-------------AVILILLMRPQGLF 287

Query: 341 RLR 343
             +
Sbjct: 288 SSK 290


>gi|237817254|ref|ZP_04596246.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus str. 2308 A]
 gi|297249758|ref|ZP_06933459.1| branched-chain amino acid transport system permease [Brucella
           abortus bv. 5 str. B3196]
 gi|237788067|gb|EEP62283.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus str. 2308 A]
 gi|297173627|gb|EFH32991.1| branched-chain amino acid transport system permease [Brucella
           abortus bv. 5 str. B3196]
          Length = 312

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/274 (12%), Positives = 84/274 (30%), Gaps = 14/274 (5%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107
           + + A GL+++ G + +++         G +   ++ ++ GL  +  + +    +     
Sbjct: 32  FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 91

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +   L            A +  +      +I    +  G                  +  
Sbjct: 92  LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 140

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                    +       ++ LG   L  ++ L+L+ +    A R +  ++ A   +   +
Sbjct: 141 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGRAIRAVAQHRSAAELMGVNV 200

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
               +  F + +A +G+A    A      S     F        +V+LGG+ S+      
Sbjct: 201 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 258

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             I+  +  +            + F     +   
Sbjct: 259 ALIIGVIDTMSGYYIGSDLREAVVFGIFLLILIL 292


>gi|222100408|ref|YP_002534976.1| Branched chain amino acid ABC transporter, permease protein
           [Thermotoga neapolitana DSM 4359]
 gi|221572798|gb|ACM23610.1| Branched chain amino acid ABC transporter, permease protein
           [Thermotoga neapolitana DSM 4359]
          Length = 306

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/311 (15%), Positives = 97/311 (31%), Gaps = 18/311 (5%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
               + + +  +   +Y + A G ++V G L L++        +G Y      +   LS 
Sbjct: 9   VFFLQNLFNGIMLGGLYALIAIGYTMVYGILRLINFAHGDVMMMGVYFAFYAATLLSLSP 68

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           +L   V+ + +   G ++   + K   +   I+ LI +      L     +  G      
Sbjct: 69  FLSAVVAILGAALLGFLIDRVAYKPLRNAPRISALITAIGVSFFLESLAVVIFGAI---- 124

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                FL       I       +     +  + V+     +   +   + RT I  A R 
Sbjct: 125 --PKSFLNVFKDRTILNKVLIVAGARIPLLTFLVIFITAVILVVLFFIVYRTKIGMAMRA 182

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  +      +   +       FA+ SA    +G  +A     + P M  F   +     
Sbjct: 183 ISMDIPTTSLMGVNVDAVIGFTFALGSALAAASGIMWAMRFPNVHPYM-GFMPGLKAFIA 241

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            + GG+ S+        +L  +                               I L +++
Sbjct: 242 AVFGGIGSIPGAVLGGVLLGLIEIFLAAYFPSVMG-----------YRDAFAFIILIVIL 290

Query: 333 LMRSHSLLRLR 343
           L++   LL  +
Sbjct: 291 LVKPSGLLGKK 301


>gi|110807285|ref|YP_690805.1| branched-chain amino acid transporter permease subunit LivH
           [Shigella flexneri 5 str. 8401]
 gi|110616833|gb|ABF05500.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Shigella flexneri 5 str. 8401]
 gi|332750290|gb|EGJ80701.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Shigella flexneri 4343-70]
          Length = 297

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 1   MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 60

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 61  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 117

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 118 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 173

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 174 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYCVINPY-IGFMAGMKAF 232

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 233 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 279

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 280 VLLVMPTGILGR 291


>gi|84686543|ref|ZP_01014436.1| Putative high-affinity branched-chain amino acid transporter
           membrane protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84665456|gb|EAQ11933.1| Putative high-affinity branched-chain amino acid transporter
           membrane protein [Rhodobacterales bacterium HTCC2654]
          Length = 310

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 57/298 (19%), Positives = 106/298 (35%), Gaps = 26/298 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
              +  Y+ S+G+ I +Y + A   ++  G    +SL     + IG Y            
Sbjct: 23  PLTNDGYLISLGVSIAMYTVLATSWALFSGPTHYISLATAAFFGIGTYVMGSGIEHLPY- 81

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            W+L+P++ +I G    ++GL +L+  G Y  I TL ++E+ +  +              
Sbjct: 82  -WVLLPIAGLIGGVIAALVGLATLRLSGVYFVIFTLGLAEMTRQAV-------------- 126

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                    T  ++            + +  +Y+ LLG+  L   +   + R+ +  A R
Sbjct: 127 ---------TWYQNQTGHKGTYVLTELTDPDIYWQLLGLAALVFLLGWAIGRSKLGFALR 177

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DMFKFSENIIVI 270
            I D++     +      +K++ F VS A   + GA  A     I P   F    +  V+
Sbjct: 178 IIGDDEDVARHVGINTALSKIALFVVSGATAAIVGAMIAPRYIYIEPATAFTPMLSFQVV 237

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
            + +LGG   L            + E            LL       +       + L
Sbjct: 238 IMALLGGTGRLWGPLVGVIPFTLLWEAISSSFPNQTTLLLGLSFLAIVYLLPGGFVGL 295


>gi|170743713|ref|YP_001772368.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168197987|gb|ACA19934.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 317

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 126/310 (40%), Gaps = 33/310 (10%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 Y   +   + ++ + A GL+++VG  G  +    + + IGAY+  +  +   L 
Sbjct: 21  PAFVGNYWLRVLTTVFMFGVVAQGLNVIVGFAGYHAFGNSVFFGIGAYAAGVGMTLG-LP 79

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           +W+ +PV+ +++     I+G P L+ RG Y AIAT+ ++      +I    +T G  G+ 
Sbjct: 80  VWIAVPVAVLVATLVAAILGWPLLRLRGHYFAIATVALNAAATEAIINIGGVTGGAQGLP 139

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           +                              +Y+ +L    L+  ++ WL R+ +  A R
Sbjct: 140 LPFSA-----------------LPPTTLYRIIYFAMLAALVLATGVVFWLSRSRLGYALR 182

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DMFKFSENIIVI 270
            +RD++     +    + AK+ A+ +S+A  G  G  +A     I     F  S ++   
Sbjct: 183 ALRDSEDGAEVMGVDTVRAKILAWMISAAMTGAVGGLWAYWLTFIEVGTAFDVSISVRGY 242

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            +++LGGM ++       A+   V +                   F+  H  L+   +  
Sbjct: 243 IMMLLGGMGTVIGPVIGAALFQLVGD--------------AIWSHFSGIHNLLLGALVMA 288

Query: 331 VILMRSHSLL 340
           V+LM    LL
Sbjct: 289 VVLMVPRGLL 298


>gi|300787991|ref|YP_003768282.1| branched-chain amino acid ABC transporter permease [Amycolatopsis
           mediterranei U32]
 gi|299797505|gb|ADJ47880.1| permease component of ABC-type branched-chain amino acid transport
           system [Amycolatopsis mediterranei U32]
          Length = 322

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 50/315 (15%), Positives = 99/315 (31%), Gaps = 31/315 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   IY + A G ++V G L L++      + IG  + + + +    S  +++ + AMI
Sbjct: 17  LVLGSIYALVALGYTMVYGVLRLINFAHSEIFMIGTMTSLFILASIATSGHIVLGLGAMI 76

Query: 103 ---------------SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                            A  +         +     +A LI +      L +   +    
Sbjct: 77  LLLLALMLASALLSGGSAVVLEQVAYRPLRKRGSSKLAALISAIGASIFLQELFALVIIP 136

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                + R+               FP    +       V++G   +   +   +RRT I 
Sbjct: 137 NVFGKSGRVPQNAPRFVDRDTL--FPVGNAVVRTDQVLVIIGAVIVMVVLDQLVRRTRIG 194

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
              R    + +A   +  +I       F +  A  G+A A +    +  +     F   I
Sbjct: 195 RGIRATAQDPEAAVLMGVSIDRIVRITFLLGGAMAGVASALYLMELEN-TGYRVGFVLGI 253

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              +  +LGG+ +L        +L  V           +  +  F             + 
Sbjct: 254 KAFTAAVLGGIGNLRGALLGGIVLGLVENWSAIFLGSEWKDVTAF-------------VV 300

Query: 328 LFLVILMRSHSLLRL 342
           L LV++ R   +L  
Sbjct: 301 LVLVLMFRPTGILGE 315


>gi|17548058|ref|NP_521460.1| transmembrane ABC transporter protein [Ralstonia solanacearum
           GMI1000]
 gi|17430364|emb|CAD17129.1| probable transmembrane abc transporter protein [Ralstonia
           solanacearum GMI1000]
          Length = 313

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 108/316 (34%), Gaps = 26/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y M + GL+++ G L +++      + +GA    +  S
Sbjct: 22  IFGVPLPAMLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLTWMGLS 81

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              L  W+++  + +  G  G+++    L+F      +  L+++     ++        G
Sbjct: 82  YLDLPYWVMLVAAPLAVGVVGVVIERTMLRFIYKLDHLYGLLLTLGVTLVIEGVFRAVYG 141

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+  +      G T             F++   +  +V++    +  +    + +T +
Sbjct: 142 VSGLPYSTPELLSGAT----------DLGFMVLPNYRAWVVVASLTVCFATWFMIEKTKL 191

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +   +  
Sbjct: 192 GAYLRAGTENPKLVEAFGVNVPLMVTLTYGFGVALAAFAGVLAAPVIQI--SPLMGQNMI 249

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+         L  +  L   +              +    +T++ +
Sbjct: 250 ITVFAVVVIGGMGSILGSIVTGLGLGVIEGLTKVV--------------YPQASSTVVFV 295

Query: 327 ALFLVILMRSHSLLRL 342
            + LV+L+R   L   
Sbjct: 296 IMALVLLVRPAGLFGR 311


>gi|194336883|ref|YP_002018677.1| inner-membrane translocator [Pelodictyon phaeoclathratiforme BU-1]
 gi|194309360|gb|ACF44060.1| inner-membrane translocator [Pelodictyon phaeoclathratiforme BU-1]
          Length = 289

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 94/305 (30%), Gaps = 25/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +   +Y +   G+S+V G + + +        +G Y      +   +  +L + +
Sbjct: 7   LLSGILTGGVYALAGIGMSLVFGVMNISNFAHGDLMMLGMYLAYFAFTLLHIDPYLSLVL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++   G ++    +     +     ++++     I+     +               
Sbjct: 67  IMPVAFLFGFMLEKLFINRVIHHPHQNQILLTVGLGLIMSNTALL----------AFTSD 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S           +   + +    L  C ++A + L+L +T+   A R    N++
Sbjct: 117 PKILTTSYSSSAYNLPGGIFLSVPLVISFLITCGITALLSLFLLKTSTGMALRATSQNRE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +      AF + +A    AGA  A +          F       +I +LGG+
Sbjct: 177 AAQLMGINVAKMSAIAFGIGTALAATAGALIAPTYYIHPLAGHSFLL--KAFTICVLGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  V  +        +  ++ F     +                R   
Sbjct: 235 GSVIGAGVGGLIIGVVEAMSSTYISTDWKDVVVFVLFLAVLLL-------------RPQG 281

Query: 339 LLRLR 343
           L   +
Sbjct: 282 LFGKK 286


>gi|172037859|ref|YP_001804360.1| branched-chain amino acid ABC transporter permease [Cyanothece sp.
           ATCC 51142]
 gi|171699313|gb|ACB52294.1| branched-chain amino acid ABC transporter permease protein
           [Cyanothece sp. ATCC 51142]
          Length = 294

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 84/292 (28%), Gaps = 12/292 (4%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
           + + +        +  + A GL++  G L L +        +GAY   +  ++       
Sbjct: 10  TAQNLFDGLAIGSVIALAAVGLTLTYGILRLSNFAHGDFMTLGAYLTWLANTQGLNLGLS 69

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
           +I  +     A  +   L     R       TLI+  I   + ++   +           
Sbjct: 70  VIIGAMGTVLAMLVSEYLLWKPMRDRRATSTTLIIISIGLALFLRNGILM---------- 119

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
            ++        +          +       + ++      A + L L+ T I  A R + 
Sbjct: 120 -IWGAKNQRYDIPLVQAQKLFGLQLATDRIWAIILSIVAIAILHLVLQNTKIGKAMRAVA 178

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           DN          +    L  + +++    + G         +      +   + + + VI
Sbjct: 179 DNIDLARVSGINVEQVVLWTWVITAILTTLGGVMLGLITSTV-RPNMGWFLILPMFASVI 237

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           LGG+ +         ++    EL        +   +       +       I
Sbjct: 238 LGGIGNPYGAIAGGLVIGVAQELSVPWLGPDYKLGVALLIMILILLIRPQGI 289


>gi|38374232|gb|AAR19311.1| putative branched-chain amino acid transporter permease protein
           [symbiont bacterium of Paederus fuscipes]
          Length = 307

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 90/305 (29%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y +G+Y   I  +   +     +P+
Sbjct: 11  LVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMLGSYIAFIAITLLAMLGLDNVPL 70

Query: 99  SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             + +    +I+                      I     I           +    +  
Sbjct: 71  LMLAAFTASIIVTSAFGYSIERVAYRPLRGGNRLIPLISAIGMSFFLQNAVMLSQDSKEK 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   +     F     + V+       + +    +   + L++ R+ +  A R   ++ 
Sbjct: 131 AIPALLPGSFVFGESSMNGVVISYMQILIFIVTFLVMFGLTLFISRSRLGRACRACAEDL 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +A          I+     F   I   +  +LGG
Sbjct: 191 KMADLLGINSNNVIAFTFVIGAALAAVAATLLGMLYGVIN-PGIGFLAGIKAFTAAVLGG 249

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L         M    +  ++ F               L LV+L R  
Sbjct: 250 IGSIPGAMLGGLLLGVTEAFGADMFGDQYKDVVAFG-------------LLILVLLFRPT 296

Query: 338 SLLRL 342
            +L  
Sbjct: 297 GILGR 301


>gi|146306418|ref|YP_001186883.1| inner-membrane translocator [Pseudomonas mendocina ymp]
 gi|145574619|gb|ABP84151.1| L-leucine ABC transporter membrane protein / L-valine ABC
           transporter membrane protein / L-isoleucine ABC
           transporter membrane protein [Pseudomonas mendocina ymp]
          Length = 307

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 86/290 (29%), Gaps = 2/290 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y    + +   +     +P 
Sbjct: 11  LLNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFTVIAGLAMFGLEAVPF 70

Query: 99  SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             + + A  MI+                      I     I           +    +  
Sbjct: 71  VMIAAFAATMIVTSAYGYSIERVAYRPLRGGNRLIPLISAIGMSIFLQNAVLLSQDSKDK 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            + + +          ++ V+       + +        + L++ R+ +  A R   ++ 
Sbjct: 131 AIPSLLPGNFILGESAANGVVVSYMQVLIFIVTFVAMIGLTLFISRSRLGRACRACAEDL 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +A      +   I+P    F   I   +  +LGG
Sbjct: 191 KMANLLGINTNNIIALTFVIGAALAAIASVLLGMNYGVINPH-LGFLAGIKAFTAAVLGG 249

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           + S+        +L         +    +  ++ F     +       I 
Sbjct: 250 IGSIPGAVLGGLLLGVAEAFGADIFGDQYKDVVAFSLLVLVLLFRPTGIL 299


>gi|194435796|ref|ZP_03067899.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli 101-1]
 gi|194425339|gb|EDX41323.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli 101-1]
 gi|323970054|gb|EGB65329.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli TA007]
          Length = 308

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVVALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|99080210|ref|YP_612364.1| inner-membrane translocator [Ruegeria sp. TM1040]
 gi|99036490|gb|ABF63102.1| inner-membrane translocator [Ruegeria sp. TM1040]
          Length = 354

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 89/313 (28%), Gaps = 18/313 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +   +   L      S   +  +  Q+ I  + A   S+V+ + G + L+     
Sbjct: 46  LIVLVLSIIIFGLLLGSKFFSPFALTLILQQVGIVGIVACAQSLVILTAG-IDLSVGAIM 104

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +        RYGL   L +    +    CG I G    K +                
Sbjct: 105 VLSSVVMGQFTFRYGLPPTLGVACGLLCGTLCGYINGWLVAKMKLPPF------------ 152

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    I      +Y A+                 F   F +      Y ++ M  L 
Sbjct: 153 IVTLGMWQIVLASNFLYSANETIRSQVIAEEAPFLQFFGEKFKVGGAVFTYGVIFMIVLV 212

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   LR TA       + D++ A            +S + +S      AG        
Sbjct: 213 LVLAYVLRHTAWGRHVYAVGDDKDAAELSGVNTDKVLISVYMLSGLICAFAGWALIGRIG 272

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   + S    + ++VI      GG  S+        I+         +      + 
Sbjct: 273 SVSPTSGQLSNIESITAVVIGGISLFGGRGSVLGTFFGALIVGVFTLGLRLLGADAQWTY 332

Query: 310 LKFDCSFNMRHTT 322
           L            
Sbjct: 333 LLIGVLIIAAVAV 345


>gi|294676777|ref|YP_003577392.1| urea ABC transporter permease UrtC [Rhodobacter capsulatus SB 1003]
 gi|294475597|gb|ADE84985.1| urea ABC transporter, permease protein UrtC [Rhodobacter capsulatus
           SB 1003]
          Length = 408

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/361 (14%), Positives = 97/361 (26%), Gaps = 34/361 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  L  +   +L    G       +     + L   + A  + +V G +G+LSL     +
Sbjct: 18  LLALFTLTVTVLSNAYGLDLVSTSMVKTLGKTLCLCLIALAMDLVWGYMGILSLGHFAFF 77

Query: 75  AIGAYSYVIL-----------------------------GSRYGLSIWLLIPVSAMISGA 105
            +G Y   +                                 +G+     +P   +++G+
Sbjct: 78  GLGGYMIGMWLMVARSREIVLASAQGLPMTPQEMSDAIAAQIFGVVGASEMPAIWVLAGS 137

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
               + L  +      L    L        + +         A      +          
Sbjct: 138 LPAQLALVVIVPGLLALGFGWLAFRSRVTGVYLSILTQAMTLALALYLFQNDSGLRGNNG 197

Query: 166 LIRFFRFPS----SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
           L      P           ++  +       L              +  R IRD++    
Sbjct: 198 LSGLQNIPGLDGAGQDRLSVWFLWASALALGLGYLACAVTVSGKFGSVMRAIRDDEARVR 257

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
            L   +   KL  F +++    +AGA +      I+P       +I +   V +GG   L
Sbjct: 258 FLGYPVEGYKLFVFTLTALIAAIAGALYYPQAGIINPAEVAPIASIYLAVWVAIGGRGRL 317

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  A +  V     G           +   +      L+ ++  LV L     L  
Sbjct: 318 WGAVIGAAFVSLVSTWFTGGRAPDLPMGF-YTVKWVDWWQVLLGLSFVLVTLFAPKGLSG 376

Query: 342 L 342
           L
Sbjct: 377 L 377


>gi|209920914|ref|YP_002294998.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli SE11]
 gi|300926849|ref|ZP_07142616.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 182-1]
 gi|301302339|ref|ZP_07208471.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 124-1]
 gi|301329774|ref|ZP_07222513.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 78-1]
 gi|307311878|ref|ZP_07591516.1| inner-membrane translocator [Escherichia coli W]
 gi|309794733|ref|ZP_07689155.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 145-7]
 gi|209914173|dbj|BAG79247.1| leucine ABC transporter ABC transporter permease component
           [Escherichia coli SE11]
 gi|300417108|gb|EFK00419.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 182-1]
 gi|300842502|gb|EFK70262.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 124-1]
 gi|300844189|gb|EFK71949.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 78-1]
 gi|306908022|gb|EFN38522.1| inner-membrane translocator [Escherichia coli W]
 gi|308121783|gb|EFO59045.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 145-7]
 gi|315062734|gb|ADT77061.1| leucine/isoleucine/valine transporter subunit [Escherichia coli W]
 gi|315256049|gb|EFU36017.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 85-1]
 gi|323376678|gb|ADX48946.1| inner-membrane translocator [Escherichia coli KO11]
 gi|324018696|gb|EGB87915.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 117-3]
          Length = 308

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTVFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|158316335|ref|YP_001508843.1| ABC transporter related [Frankia sp. EAN1pec]
 gi|158111740|gb|ABW13937.1| ABC transporter related [Frankia sp. EAN1pec]
          Length = 989

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 63/377 (16%), Positives = 135/377 (35%), Gaps = 45/377 (11%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           SI    L +  +   ++     +    F     +     +  I  L+  + A    +V G
Sbjct: 311 SIVQQTLGRAPRPKSMVLPGVVIAAAGFAALAATHGSHRAAIITTLVLAIIALSQVVVTG 370

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G +SL  +    +GA++   +  +  +   +   ++A+ +   G+++GLP+L+ RG  
Sbjct: 371 FSGQISLAQLTLAGVGAFALTRIQHQLHVPFPIAPLLAAVFATIVGVVVGLPALRIRGLP 430

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           +A+ TL ++ + + +    K +  G  G  + D   F               +      +
Sbjct: 431 VAVTTLALAVVLEKLWFTNKDLNGGFNGSPIDDASIFGVNL--------GIGAGAGYPRL 482

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
                 L +  L A  ++ LRR+ +  A   +R N+++  +   ++   KL AFA+    
Sbjct: 483 TFGLFCLVVLLLVAGGVVLLRRSRLGAAMLAVRANERSAAASGISVSQVKLVAFAIGGFL 542

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI----------- 290
            G+ GA  A  +       +     + + +   L G+TS+S    A  I           
Sbjct: 543 AGLGGAMLAYQQTVADSSSYTAMGCVALFATAYLAGVTSVSGGINAGLIGAGGIIFTLVD 602

Query: 291 --------------------------LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
                                     LI  +    G+       L +   +    +TT+ 
Sbjct: 603 KGLPLGVYVLLVGLPVLAIVAEIRPKLIPALSGVVGVLTLAAFLLHRDTVALGDYYTTVS 662

Query: 325 VIALFLVILMRSHSLLR 341
            + L L +++    ++ 
Sbjct: 663 GVLLVLTVILNPEGIVG 679



 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/295 (9%), Positives = 81/295 (27%), Gaps = 8/295 (2%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           ++        +Y     GL +   S G+++          AY+Y  L     L+    + 
Sbjct: 8   FLILGLGNGAVYAALGLGLVLTYRSSGVVNFATGAVALYTAYTYAFLRQGKLLNPIPGLT 67

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            +  +           +L         + L  +                  G+ +  +  
Sbjct: 68  GTVDLGIDGMGFPAAFALSLVVAAALGSLLYAAVFRPMRAAPTAAKAVASIGVMIVMQAL 127

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIF------MYYVLLGMCFLSASIILWLRRTAISNAWR 211
                  + +       + +             +    +  ++ ++ LW R T    A R
Sbjct: 128 LAVQVGTTAVSVAAILPTRIYTVAGQRVPGDRLWFAGIIIVMAVALTLWFRLTRFGLATR 187

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
              +++K       +     L  +A+S+   G+ G   A         +      +  ++
Sbjct: 188 AAAESEKGALVTGLSPQRIALVNWALSTMIAGVGGILIAPIVPL--TPVSYTLFIVPALA 245

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             ++G  T +     A  ++  +      +    +           +    + ++
Sbjct: 246 TALVGNFTRIGTAVSAGLVIGMLQSEATNLQTRSWLPSSGLAELVPLAVILIFLV 300


>gi|312174137|emb|CBX82390.1| branched-chain amino acid ABC transport system, inner membrane
           component [Erwinia amylovora ATCC BAA-2158]
          Length = 308

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 95/312 (30%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMLGIDTSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                  V+ +I+   G  +   + K       +  LI +      L  +  +T G    
Sbjct: 72  LIGCGFVVAVVIASCYGWSIERVAYKPVRSSKRLIALISAIGMSISLQNYVSLTQGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L   V                      +         ++ L++R + +  A 
Sbjct: 129 ----RDLALPGLVSGQWTLGVSNGFAATISTMQLMIWGVTFLAMLALTLFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFLAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L +
Sbjct: 244 TAAVLGGIGSIPGAMLGGLILGIAEALTSAYLSTEYKDVVSF-------------ALLIV 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|170759256|ref|YP_001785796.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium botulinum A3 str. Loch Maree]
 gi|169406245|gb|ACA54656.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium botulinum A3 str. Loch Maree]
          Length = 290

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 106/304 (34%), Gaps = 25/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G +++ G L +L+         G + +  + S + + + L I +
Sbjct: 6   LVNGITLGSIYCLAALGFNMIFGVLKMLNFAHGEILMFGTFVFFTMVSIFKIPLILAIVL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I+G  G+++ L + K      A+A L+ S     +L     +  G            
Sbjct: 66  TIVITGLIGILLYLIAYKPVLKGDAMAPLLSSLGVSIMLEALAQLIWGTE---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    +  + +       ++ L    L   +  ++ ++ I    R +  N+K
Sbjct: 116 -IIPFPINIPKGTYSIASIKLSNIQIFIFLFSITLMIILYKFIMKSNIGLQIRALSYNRK 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        +  F++++    ++G   +   D +   M      I   +  ILGG+
Sbjct: 175 YAELMGIETDKITMIVFSLATILAMVSGILSSMYYDALYVTM-GSGVMIKAFAAAILGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL     L        +   + F             I L LV++++ + 
Sbjct: 234 GSIPGALVGGYILGVSESLVGAYISTSYVDGIAF-------------IILVLVLIIKPNG 280

Query: 339 LLRL 342
           +   
Sbjct: 281 IFGE 284


>gi|160894349|ref|ZP_02075126.1| hypothetical protein CLOL250_01902 [Clostridium sp. L2-50]
 gi|156864050|gb|EDO57481.1| hypothetical protein CLOL250_01902 [Clostridium sp. L2-50]
          Length = 550

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/327 (9%), Positives = 83/327 (25%), Gaps = 9/327 (2%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           S F  +   Y  I+ +   +  +   +      +   I ++  Q    +  A G++ ++ 
Sbjct: 218 SQFLYKNGLYIVIILIFIALCIITPIVKNTQLLTVTNILNILQQASPRMFLALGVAGLIL 277

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G   L+      +G  +  I+      +    +                         
Sbjct: 278 LTG-TDLSIGRMVGMGMVTATIIMHNGPNTG--GVFGHIFDFSNISAAPRAILALVACII 334

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           L      ++  F         I+     + +   + +    V         P+ F+    
Sbjct: 335 LTTVFASIAGFFMAKYKMHPFISTMANMLIIFGLVTYATKGVSFGAIDSSIPNMFIPTFG 394

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
               ++L        +     +T        +  N +A      ++    L AF ++   
Sbjct: 395 SFPSIILWAIVAIIVVWFIWNKTTFGKNLYAVGGNPEAAAVSGISVFKVTLGAFILAGIL 454

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVV 295
            G                 +    ++  I+  ++      GG+  +S +     I   + 
Sbjct: 455 YGFGSWLECNRMVGSGSAAYGQGWDMDAIAACVVGGVSFTGGIGKISGVVTGVLIFTSLT 514

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                +        +          T 
Sbjct: 515 YSLTILGIDTNLQFIFEGIIILAAVTL 541


>gi|241663093|ref|YP_002981453.1| inner-membrane translocator [Ralstonia pickettii 12D]
 gi|240865120|gb|ACS62781.1| inner-membrane translocator [Ralstonia pickettii 12D]
          Length = 330

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 113/321 (35%), Gaps = 27/321 (8%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
            + +     L+  M + GL+++   +G+L+      Y +GAY   ++        W  + 
Sbjct: 22  NLLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYVVSGYL--GFWPALI 79

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           V+ ++ GA G ++    L+    Y  +A L+ +     ++ +   +  G         L 
Sbjct: 80  VAPLLVGALGAVVERFGLRTVHRYGHVAELLFTFGLAYLIEEGVKLVWG---------LP 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   V   +    F      +  +  +++L    +   I L L RT I    +    + 
Sbjct: 131 AVPYRVPDALDGPLFTLFTSSFPKYRAFMMLVSLLMLVGIFLLLTRTRIGLVIQAALTHP 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +L   +    +  F    A  G+AG         ++      +   IV  + ++GG
Sbjct: 191 DMVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NAFVTEPSMAAAVGSIVFVVAVVGG 248

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL------- 330
           M SL     A+ ++  +      ++    + L K   + N     + V  L +       
Sbjct: 249 MGSLVGAFVASLLIGCIQTFAVTLDISVTSVLGKIGVTLNPDVPLISVWNLTIAQVAPVL 308

Query: 331 -------VILMRSHSLLRLRT 344
                  +++ R   L+  R 
Sbjct: 309 PYLLLVLMLIFRPRGLMGTRE 329


>gi|89054649|ref|YP_510100.1| inner-membrane translocator [Jannaschia sp. CCS1]
 gi|88864198|gb|ABD55075.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Jannaschia sp. CCS1]
          Length = 336

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/334 (9%), Positives = 85/334 (25%), Gaps = 19/334 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY----- 81
           FL      +   I           + A G++++ G L   +       A G         
Sbjct: 3   FLNALVALTNFVIVPATAYGAQLALGALGVTLIYGILRFSNFAHGDTMAFGTMVTIFGTW 62

Query: 82  ----VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
                 +      +  + +P+   ++ A  +       +F     A   + +      + 
Sbjct: 63  GLQAAGVSFGPLPTALIALPLGIAVTAALMIGTDRVVYRFYRTQKAKPVIFVIASLGVMF 122

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I    +                        R        + +       ++        +
Sbjct: 123 IMNGIVRFFIGVDDQRFSDGERFIIRARDFREMTGLDEGLAFRTTQGITIVVAIIAVVLL 182

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L RT    + R   DN+              L  + + +A    AG  +   +    
Sbjct: 183 FWFLNRTRTGKSMRAFSDNEDLALLSGINPDRVVLVTWIIVAALATTAGVLYGLDKSF-- 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG--------VVELCCGMNFYYFNSL 309
                F   + + +  I+GG+ +         ++            ++   +    +   
Sbjct: 241 KPFTYFQLLLPIFASAIVGGLGNPLGAILGGFLIAFSEVGVTYAFRKVVGYLGPEDWQPD 300

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                        +    L +V+L +   +++ +
Sbjct: 301 GLLQLLSTDYKFAVSFGILLIVLLFKPTGIMKGK 334


>gi|37676230|ref|NP_936626.1| ribose ABC transporter permease protein [Vibrio vulnificus YJ016]
 gi|37200771|dbj|BAC96596.1| ribose ABC transporter, permease protein [Vibrio vulnificus YJ016]
          Length = 328

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 97/312 (31%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 30  LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 88

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   ++        + + + +P + +   + G I G+   K +        + M+     
Sbjct: 89  LCG-AFAASLVAMEVPVLIAVPTALLAGASLGAISGVIIAKGKVQAFIATLVTMT----- 142

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G   +Y   R    G T  +    +      +   + ++ +++       
Sbjct: 143 -------LLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVVVFAAAWY 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +      T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 196 LL----NHTRFGRYVYALGGNESATRLSGINVDKVKIGVYAICGLLAALAGIIVTSRLSS 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 252 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 311

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 312 AKAAVILLAVMV 323


>gi|46202169|ref|ZP_00053653.2| COG0559: Branched-chain amino acid ABC-type transport system,
           permease components [Magnetospirillum magnetotacticum
           MS-1]
          Length = 288

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 53/306 (17%), Positives = 103/306 (33%), Gaps = 26/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +  L+Y + A GLS++ G + +++       A+  Y+   L S   L   + +P+
Sbjct: 9   IVTGLLTGLVYSLMALGLSVIFGVVRVVNFAHGEMTALAMYAAWALFSWLELDPLIGLPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A++  A G +M    +            I+      +++    +  G     +      
Sbjct: 69  IALLLFALGYVMQRGLIDAFVSKPEHMQFILLVAVAIVMVNGSLLVFGPDAHGIQVP--- 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                     F  +    ++ +       +    +S  ++L+ R T    A R   DN  
Sbjct: 126 --------YGFDTYEVGPLLVDKVRLLAAVAALAISGLLMLFFRHTMTGKAIRACADNLV 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + SA +G AGA  A   D            ++   IVI+GG+
Sbjct: 178 GAKVIGLNVKQLYAVTFGIGSACVGAAGALLAMLIDV--MPSSGPELTMLAFIIVIVGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++     L          S+  F               L LV+++R   
Sbjct: 236 GSMGGALLGGILIGISEVLAGYFLMPSMKSMFSF-------------AILILVLILRPQG 282

Query: 339 LLRLRT 344
           L+  R 
Sbjct: 283 LMGARK 288


>gi|323959691|gb|EGB55342.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H489]
          Length = 308

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/314 (14%), Positives = 98/314 (31%), Gaps = 29/314 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRLRT 344
           V+L+    +L    
Sbjct: 291 VLLVMPTGILGRSE 304


>gi|260424836|ref|ZP_05733429.2| amino acid ABC transporter, permease protein LivH [Dialister
           invisus DSM 15470]
 gi|260403329|gb|EEW96876.1| amino acid ABC transporter, permease protein LivH [Dialister
           invisus DSM 15470]
          Length = 310

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 96/304 (31%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G L ++++     + IGAY  ++L +  G++I+  +  
Sbjct: 23  LVNGLTLGSAYAVIAIGYTLVFGVLNIVNMAHGGIFMIGAYIGLLLVTEAGMNIFPALAG 82

Query: 99  SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           + +     G  + L +     +     +A LI +      L     +  G          
Sbjct: 83  AMIGGAVLGYGLELLALRPLRKHKATHLAPLISTIGVSTFLESVALMVWGPQTRS----- 137

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   S                     L     L   + + L RT +  A R   +N
Sbjct: 138 ------FPSAFGNELMDMGVFKISGIQIISLGTAVVLMVLLTVMLNRTKVGKAIRATSEN 191

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    L             ++SA    AG     S + I P M   S  +  ++++I+G
Sbjct: 192 AETAGLLGINTGRIITLTVMLASALGAAAGVLIGLSFNAIEPTM-GTSMGLKGLAVLIMG 250

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++        IL              +   + F               + L++ +R 
Sbjct: 251 GLGNVEGAMAGGFILGIAEVFSVAYGTSSYRDAVAFG-------------LIILILFIRP 297

Query: 337 HSLL 340
             L 
Sbjct: 298 EGLF 301


>gi|254487704|ref|ZP_05100909.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. GAI101]
 gi|214044573|gb|EEB85211.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. GAI101]
          Length = 336

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/331 (10%), Positives = 86/331 (25%), Gaps = 19/331 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           FL      +   +           + A G+++V G L   +       A+GA S V++  
Sbjct: 3   FLNALVALANYVLVPGIAYGSQLALGALGVTLVYGILRFSNFAHGDTMALGAMSAVLITW 62

Query: 87  RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            +              + +P + +I+    +       +F  +  A   + +        
Sbjct: 63  GFQAMGLHLWVLPTALIALPFAILITIGLLLGTDRMVYRFYREKKAKPVIFVIVSLGITF 122

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I                             +        +  +      ++    + A +
Sbjct: 123 IYNGITRFIIGSDDQNFADGERFIISARTFKKMTGLEEGLAIKTTQGLTVITAIIVVAVL 182

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L +T    + R   DN+              +  + + +     AG  +   +    
Sbjct: 183 FWFLNKTRSGKSMRAYSDNEDLALLSGINPERVVMITWIIVACLATTAGVLYGLDKSF-- 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309
                F   + + +  I+GG+ +         ++             +   M        
Sbjct: 241 KPFTYFQLLLPIFAAAIVGGLGNPVGAIAGGFVIAFSEVTITYAWKKVLGYMMPAGLEPD 300

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                        +  + L +V+L +   L 
Sbjct: 301 GLVQLMSTDYKFAVSFVILLIVLLFKPTGLF 331


>gi|167770133|ref|ZP_02442186.1| hypothetical protein ANACOL_01476 [Anaerotruncus colihominis DSM
           17241]
 gi|167667455|gb|EDS11585.1| hypothetical protein ANACOL_01476 [Anaerotruncus colihominis DSM
           17241]
          Length = 303

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 90/309 (29%), Gaps = 26/309 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     + Y + A G S+V G L L + +    YA GA+  V          + +   
Sbjct: 18  LFNGLALGMAYALIAVGYSLVFGILRLTNFSHGSIYAFGAHMAVSFVGFQFGLFFAIALA 77

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAI-ATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             +      ++        R       A+LI +     I+     I  G           
Sbjct: 78  IILTGILDILVDKAALAPLRKKNSMPIASLITTIGISQIIQNLLTIIYGSQ--------- 128

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
               +  +L  F       +        + +    L   +   + +T I  A R    N 
Sbjct: 129 --RRSFPALFDFGMISIGSIQIHSTQLMMCVVSLILLLVLTAIIEKTKIGLAMRATEQNT 186

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           KA   +   + F     F ++ A   +AG+  +     + P M  F   +   +  ILGG
Sbjct: 187 KAASLMGINVNFVISVTFFLTGASAAIAGSLISGYYQIVYPTM-GFMAGLKAFAAAILGG 245

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + SL        ++     L        +   + F     +                R  
Sbjct: 246 IGSLPGAVIGGLVVGVSESLGATFLGSTYRDSIAFIILIIVLIV-------------RPT 292

Query: 338 SLLRLRTPS 346
            L   +  +
Sbjct: 293 GLFGKKAIT 301


>gi|162456594|ref|YP_001618961.1| branched-chain amino acid ABC transporter,permease protein
           [Sorangium cellulosum 'So ce 56']
 gi|161167176|emb|CAN98481.1| branched-chain amino acid ABC transporter,permease protein
           [Sorangium cellulosum 'So ce 56']
          Length = 294

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 94/306 (30%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--YVILGSRYGLSIWLLI 96
           + +   Q  +  + A G ++V G L L++      + +GA++  + I       +     
Sbjct: 8   LITGLAQGSMIALVALGYTMVYGILKLINFAHSEIFMMGAFAGLFGIAAFGGDSAPLFAG 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               + + A   ++G+   K     L      ++      L+    ++           +
Sbjct: 68  VAGTLCAMAFAGVLGVVVEKVAYAPLRSRGRGLANTRITPLVTALGMS-----------V 116

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                        +R     +  E     + +    +   + L +RRT    A R +  N
Sbjct: 117 LLQNLAQLLFTARYRGYPQLLPIEHTRQVIFVTSILVMIGLELLVRRTWTGKAMRALSVN 176

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   +           F   S    +    +   + ++ P M             ++G
Sbjct: 177 VEAARLMGVRTSRIIALTFLTGSMLAAVGAVLYCLDQSQVYPTM-GVVIGNRAFVAAVIG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +++       ++  + E+                  ++     L+   L  V+L++ 
Sbjct: 236 GIGNITGAMLGGMLIGIIGEMTK-------------LTPYSGLQDVLVFAVLIGVLLVKP 282

Query: 337 HSLLRL 342
             LL  
Sbjct: 283 TGLLGT 288


>gi|153011737|ref|YP_001372951.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
 gi|151563625|gb|ABS17122.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
          Length = 326

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 64/338 (18%), Positives = 139/338 (41%), Gaps = 22/338 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
            +  K   +   LA+++  +  L     +   Y       + +  + + G+ +    +G 
Sbjct: 2   TKTTKLIGVAAFLALIFIGIPVLIETTGRHDLYYT--LTSVALLSIVSGGVWLTF-YIGR 58

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           +++       +G Y   IL  +YG+S WL +P++ +      +++G+P L+ RG Y A+ 
Sbjct: 59  INIGQGAYALMGGYVSAILMVKYGVSFWLTLPLAGLFCAFASILIGIPILRLRGVYFAMV 118

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL+++E+ + + +    ITNG  G+        +     +++  F    +        Y+
Sbjct: 119 TLVLTEVARLLAMALP-ITNGAKGMVSIPMPGGISLFGLTILPDFATLQNP---RAAFYF 174

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           V + +  L  + +  L  + I    ++++ N++   S+   I   ++ A+A+SS   G+ 
Sbjct: 175 VSIVLMVLCFAGLYRLINSRIGGLCQSLQQNEELASSIGVNITNLRVLAYAISSFLGGLG 234

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA F A    I P  F  ++++  +    LGG+  +      T +L    +         
Sbjct: 235 GAMFVAISQSIYPSSFTVTDSVNFMLNCFLGGLGYVFGPIIGTFVLYFGWDFL------- 287

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                            +    L +++L   + LL LR
Sbjct: 288 --------FQTGKFQLLIFSSVLIILMLFLPNGLLSLR 317


>gi|121607164|ref|YP_994971.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121551804|gb|ABM55953.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 320

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 102/278 (36%), Gaps = 12/278 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           +   + I  +FA  L +++G  G++SL     + +G Y+  +          + + V   
Sbjct: 37  IINTMAITALFALSLDLILGYAGIVSLGHAAFFGLGGYAAALFAKHVMPDPLVGLVVGMG 96

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G +  L  L+       + TL +  +   +  ++  +T G  G+           
Sbjct: 97  AATLLGAVASLTILRGTDLTRLMVTLGVGLVLLELANRFDALTGGADGLQGV-------- 148

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
               ++        F +      +  L +  L   +   + ++      + IRDN+    
Sbjct: 149 ----VLGPVLGRFEFDLSGRTAAWYSLSLLLLFFLLARRIVQSPFGATLKAIRDNRLRAM 204

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           ++   +       + +++A  G AGA    +    S D+F+F  +  V+ I+++GG+  L
Sbjct: 205 AIGIPVTLRLAQVYTLAAALAGAAGALHTQTTGFASLDLFEFHRSADVLLILVIGGVGWL 264

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                  A L+ + +    +   Y+   +       + 
Sbjct: 265 YGGILGAAGLMLLQDRISSVTPQYWMFWIGLFLVLLVL 302


>gi|124268942|ref|YP_001022946.1| putative branched-chain amino acid transport permease [Methylibium
           petroleiphilum PM1]
 gi|124261717|gb|ABM96711.1| putative branched-chain amino acid transport permease [Methylibium
           petroleiphilum PM1]
          Length = 327

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 57/333 (17%), Positives = 125/333 (37%), Gaps = 16/333 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++    LF+ +    +        +++L Y +FA   ++++G  GLLS          AY
Sbjct: 8   LLGYAALFIAIALLPALGAYPIFVMKVLCYALFACAFNLLIGFTGLLSFGHAAFLGAAAY 67

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                   +G    L +   A ++   G+  G  +++  G Y ++ TL ++++     ++
Sbjct: 68  GAGHALKVWGFPAPLGLLFGAAVAALAGLAFGWLAIRRSGIYFSMITLALAQMLFFFFLQ 127

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
               T G+ G+    R               RF    +  ++ +YYV+L +      +I 
Sbjct: 128 AP-FTGGEDGLQSVPR--------------GRFLGLDLANDLTLYYVVLAIFIAGFWLIY 172

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
               +       +IR+N+    SL   +   KL AF +S+A  G+AGA         +  
Sbjct: 173 RTVHSPFGQVLTSIRENEARATSLGYDVERFKLVAFVLSAALAGLAGATKTLVLGFATLT 232

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF-NSLLKFDCSFNM 318
              ++ +  VI + ++GGM ++        +++ +      +       + + +      
Sbjct: 233 DAVWTTSGAVILMTLVGGMGTMVGPMVGALVIVALENKIGDVGRALAELTGIAWFNGLGE 292

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             T +  +   L +L     ++          R
Sbjct: 293 AVTLVTGLIFILCVLAFRRGIVGEAGALLARWR 325


>gi|327485354|gb|AEA79760.1| Ribose ABC transport system, permease protein RbsC [Vibrio cholerae
           LMA3894-4]
          Length = 326

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +     +  +       +    +   + +                + F  
Sbjct: 88  LCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYALGIPVPVWLMVVVFAGAWYL 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 196 L-----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLV 322


>gi|310765694|gb|ADP10644.1| branched-chain amino acid transporter permease subunit LivH
           [Erwinia sp. Ejp617]
          Length = 308

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 102/308 (33%), Gaps = 21/308 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI----WL 94
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +      WL
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDTSWL 71

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
           LI    +++       G    +     +  +  +++ I    +  +              
Sbjct: 72  LIGCGFVVAVVIASCYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
            L  L     +L     F ++    ++ ++ V         ++ L++R + +  A R   
Sbjct: 132 ALPSLVAGQWTLGISNGFAATISTMQLVIWGVTFIA---MLALTLFIRYSRMGRACRACA 188

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           ++ K    L           F + +A   +AG         I+P    F   +   +  +
Sbjct: 189 EDLKMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFLAGMKAFTAAV 247

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           LGG+ S+        IL     L        +  ++ F               L +V+L+
Sbjct: 248 LGGIGSIPGAMLGGLILGIAEALTSAYLSTEYKDVVSF-------------ALLIVVLLV 294

Query: 335 RSHSLLRL 342
               +L  
Sbjct: 295 MPTGILGR 302


>gi|319791507|ref|YP_004153147.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315593970|gb|ADU35036.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 326

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 57/328 (17%), Positives = 118/328 (35%), Gaps = 29/328 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  +    +L   +          +  +  L   + A   +I+ G  G  S    + +  
Sbjct: 8   LAGIALFAVLVACVPFVTKSGVTLNFVMMALYATLIAQAWNILGGFGGQFSFGHALFFGT 67

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQ 134
           GAY   I   + G++ W+ +P++ + +   G+ MG  + +   +G Y A+ TL  +E+F+
Sbjct: 68  GAYIQAIAQLQGGINAWVALPLAIVGAALVGLFMGALTFRYGLKGSYFALVTLAFAEVFR 127

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +       G   +                       +          +V+L M   +
Sbjct: 128 ILALSVDFTGGGVGLMV---------------PLRESVANLQFSSRAGYLWVVLAMVVAA 172

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +  WLR        + +RDN+ A  ++       KL A  +S+AF+G AGAF+     
Sbjct: 173 LLVTWWLRNGRFGAYLQAVRDNEDAARAVGVNPFRVKLGAIGLSAAFMGAAGAFYVQVFQ 232

Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
            I     +  + +I  +   I+GGM ++        +L  + +L   +            
Sbjct: 233 YIDAGIAYGPAVSIEALVAAIVGGMGTMWGPVLGAVVLHVLSDLTRNLFG---------- 282

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                 +  +    L L+++     +  
Sbjct: 283 -ELPGINMVIYGTVLVLIVIFVPRGIAG 309


>gi|299065176|emb|CBJ36341.1| putative Branched-chain amino acid transport system permease,
           membrane component (livH) [Ralstonia solanacearum CMR15]
          Length = 313

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 107/316 (33%), Gaps = 26/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y M + GL+++ G L +++      + +GA    +  S
Sbjct: 22  IFGVPLPAMLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLTWMGLS 81

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              L  W+++  + +  G  G+++    L+F      +  L+++     ++        G
Sbjct: 82  YLDLPYWVMLLAAPLAVGVVGVVIERTMLRFIYKLDHLYGLLLTLGVTLVIEGVFRAVYG 141

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+  +      G T             F++   +  +V+     +  +    + +T +
Sbjct: 142 VSGLPYSTPELLSGAT----------DLGFMVLPNYRAWVVAASLTVCFATWFMIEKTKL 191

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +   +  
Sbjct: 192 GAYLRAGTENPKLVEAFGVNVPLMVTLTYGFGVALAAFAGVLAAPVIQI--SPLMGQNMI 249

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+         L  +  L   +              +    +T++ +
Sbjct: 250 ITVFAVVVIGGMGSILGSIVTGLGLGVIEGLTKVV--------------YPQASSTVVFV 295

Query: 327 ALFLVILMRSHSLLRL 342
            + LV+L+R   L   
Sbjct: 296 IMALVLLVRPAGLFGR 311


>gi|326318477|ref|YP_004236149.1| urea ABC transporter permease UrtC [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323375313|gb|ADX47582.1| urea ABC transporter, permease protein UrtC [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 390

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/314 (13%), Positives = 92/314 (29%), Gaps = 30/314 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
              A     LL + L       +  +   + L+Y M    +++  G  G+L+L   + + 
Sbjct: 9   ATFAAYGAFLLLVALAPLVLDPFWLNRIAKYLVYGMLGVAIALGWGYAGILNLGQGLFFG 68

Query: 76  IGAYSYVILGS-------------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           +GAY   +                     +       A++   C          F+    
Sbjct: 69  LGAYMLAMALKLASPASQQPGAHGPVPDFMLSNAEPGAIVDLCCINRGAFLWQPFQHQGF 128

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIY-----------------VADRLYFLGTTVRS 165
            +A  ++  +    ++         AG++                  A  L      +  
Sbjct: 129 GLAMGLLLPMAVAFVLGAVVFRKRIAGVFVSIITLAVVLLVRLLLVDAQPLTNGFNGLTD 188

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
           L         F  + +  YY++ G   +       L  T      +   ++      L  
Sbjct: 189 LAWLRIGGLEFDPFGLPAYYLVAGTLAVVLVGTRLLVATRAGLILKAAGEDPLRARYLGF 248

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
            +   +   F +S+    +AG  +    +  SP     + +I ++    +GG +SL    
Sbjct: 249 DVAHYQTFFFTLSAGIAAVAGMLYVVVAEFASPSFMDLAFSISMVVWAAVGGRSSLLGAC 308

Query: 286 KATAILIGVVELCC 299
               ++  +     
Sbjct: 309 LGAILINLLEATAS 322


>gi|114706263|ref|ZP_01439165.1| ABC transporter permease protein [Fulvimarina pelagi HTCC2506]
 gi|114538124|gb|EAU41246.1| ABC transporter permease protein [Fulvimarina pelagi HTCC2506]
          Length = 308

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 96/307 (31%), Gaps = 15/307 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     ++  + A GL+++ G + L++L   + Y +GAY   +  +  G     L    
Sbjct: 10  LNGIQFGILLFLVAAGLTLIFGIMDLINLAHGVLYMVGAYFVAMFTAMTGDFFLGLAIAL 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                   ++  L   +          L    +   +    K I            +   
Sbjct: 70  PAALLFGILLEILIFRRLYERDHLDQVLATFGLILILNEGVKMIWGAAPMSVQIPAILSG 129

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +            FV Y IF   +++     +  + + +  T      R    +   
Sbjct: 130 SVPL----------IGFVQYPIFRIAIIVAGLATALGLYVLVNHTRTGMLLRAGATDGPM 179

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   I    +  F + +   G AGA  A             S  I+   ++++GG+ 
Sbjct: 180 VSALGVDIKRLFMLVFGLGAMLAGFAGAMVAPILSV--EPGMGDSILILTFVVIVIGGVG 237

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMRS 336
           S+     A  ++  V  L          S +    +     T    L+ I + +V+ +R 
Sbjct: 238 SVRGAFVAAILVGLVDTLGRTFGPILLRSAMDASAAGQAGRTLAPMLIYILMAVVLFLRP 297

Query: 337 HSLLRLR 343
             L   R
Sbjct: 298 SGLFPAR 304


>gi|271502543|ref|YP_003335569.1| inner-membrane translocator [Dickeya dadantii Ech586]
 gi|270346098|gb|ACZ78863.1| inner-membrane translocator [Dickeya dadantii Ech586]
          Length = 308

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 91/305 (29%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDAGWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
              ++    +++                     +   I  I           +    R  
Sbjct: 72  LIGVAFIAAVVISSAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLMQGSRDV 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + ++                     + +       ++ L++R + +  A R   ++ 
Sbjct: 132 ALPSLIQGQWVLGESNGFAATLSAMQLTIWVVTFLAMLALTLFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L  +        F + +A   +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGISTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     L        +  ++ F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLILGIAESLTSAYLSTEYKDVVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|170289455|ref|YP_001739693.1| inner-membrane translocator [Thermotoga sp. RQ2]
 gi|170176958|gb|ACB10010.1| inner-membrane translocator [Thermotoga sp. RQ2]
          Length = 299

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 96/311 (30%), Gaps = 18/311 (5%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
               + + +  +   +Y + A G ++V G L L++        +G Y      +   L+ 
Sbjct: 2   VFFLQNLFNGIMLGGLYALIAIGYTMVYGILRLINFAHGDVMMMGVYFAFYAATLLSLNP 61

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
                V+ + +   G ++   + K   +   I+ LI +      L     +  G      
Sbjct: 62  LFSAIVAILGAALLGFLIDRVAYKPLRNAPRISALITAIGVSFFLESLAVVVFGAI---- 117

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                FL       I       +     +  + V+     +   +   + RT I  A R 
Sbjct: 118 --PKSFLKVFKDRTILNKVLTVAGARIPLLTFLVIFITVVILIVLFFIVYRTKIGMAMRA 175

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  +      +   +       FA+ SA    +G  +A     + P M  F   +     
Sbjct: 176 ISMDIPTTALMGVNVDAVIGFTFALGSALAAASGIMWAMRFPNVHPYM-GFMPGLKAFIA 234

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            + GG+ S+        +L  +          +                    I L +++
Sbjct: 235 AVFGGIGSIPGAVLGGVLLGLIEIFLAAYFPAFMG-----------YRDAFAFIILIVIL 283

Query: 333 LMRSHSLLRLR 343
           L++   LL  +
Sbjct: 284 LVKPSGLLGKK 294


>gi|54303227|ref|YP_133220.1| ribose ABC transporter permease protein [Photobacterium profundum
           SS9]
 gi|46916655|emb|CAG23420.1| Putative ribose ABC transporter, permease protein [Photobacterium
           profundum SS9]
          Length = 329

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/313 (9%), Positives = 84/313 (26%), Gaps = 25/313 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++  +++        +   I ++  Q  I  + A G+++V+ + G + L+     A
Sbjct: 31  LIALILLIVVVSFLNPNFFTVDNILNILRQTSINAIIAVGMTLVILTAG-IDLSVGSVLA 89

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      +I  +       +    +   + +                + F  
Sbjct: 90  LCGAFAATMIGLEIPAIIAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 137

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T V     +F    +  I       V++       
Sbjct: 138 TLVTMTLLRGVTMVYTDGRPISTGFTEVADGFAWFGTGYAMGIPVPIWLMVIVFASIWYL 197

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 198 L-----NHTRFGRYIYALGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 252

Query: 256 ISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             P        +  I+ V+LGG         +        I+  +      ++   +  +
Sbjct: 253 AQPTA-GMGYELDAIAAVVLGGTSLAGGKGRIMGTLVGALIIGFLNNALNLLDVSSYYQM 311

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 312 IAKAVVILLAVLV 324


>gi|15803967|ref|NP_290003.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli O157:H7 EDL933]
 gi|15833558|ref|NP_312331.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli O157:H7 str. Sakai]
 gi|16131329|ref|NP_417914.1| leucine/isoleucine/valine transporter subunit [Escherichia coli
           str. K-12 substr. MG1655]
 gi|74314057|ref|YP_312476.1| branched-chain amino acid transporter permease subunit LivH
           [Shigella sonnei Ss046]
 gi|82545818|ref|YP_409765.1| branched-chain amino acid transporter permease subunit LivH
           [Shigella boydii Sb227]
 gi|89110555|ref|AP_004335.1| leucine/isoleucine/valine transporter subunit [Escherichia coli
           str. K-12 substr. W3110]
 gi|157155414|ref|YP_001464919.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli E24377A]
 gi|157162933|ref|YP_001460251.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli HS]
 gi|168747053|ref|ZP_02772075.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC4113]
 gi|168753221|ref|ZP_02778228.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC4401]
 gi|168759491|ref|ZP_02784498.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC4501]
 gi|168765816|ref|ZP_02790823.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC4486]
 gi|168772638|ref|ZP_02797645.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC4196]
 gi|168779552|ref|ZP_02804559.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC4076]
 gi|168785274|ref|ZP_02810281.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC869]
 gi|168797239|ref|ZP_02822246.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC508]
 gi|170018311|ref|YP_001723265.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli ATCC 8739]
 gi|170082971|ref|YP_001732291.1| leucine/isoleucine/valine ABC transporter membrane component
           [Escherichia coli str. K-12 substr. DH10B]
 gi|187733821|ref|YP_001882156.1| branched-chain amino acid transporter permease subunit LivH
           [Shigella boydii CDC 3083-94]
 gi|188494746|ref|ZP_03002016.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli 53638]
 gi|191167304|ref|ZP_03029121.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli B7A]
 gi|193061882|ref|ZP_03042979.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli E22]
 gi|193068803|ref|ZP_03049763.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli E110019]
 gi|194427004|ref|ZP_03059556.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli B171]
 gi|194431275|ref|ZP_03063568.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Shigella dysenteriae 1012]
 gi|195934949|ref|ZP_03080331.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli O157:H7 str. EC4024]
 gi|208807113|ref|ZP_03249450.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC4206]
 gi|208813998|ref|ZP_03255327.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC4045]
 gi|208819102|ref|ZP_03259422.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC4042]
 gi|209400625|ref|YP_002272898.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC4115]
 gi|217326366|ref|ZP_03442450.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. TW14588]
 gi|218556006|ref|YP_002388919.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli IAI1]
 gi|218697140|ref|YP_002404807.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli 55989]
 gi|238902548|ref|YP_002928344.1| leucine/isoleucine/valine transporter subunit [Escherichia coli
           BW2952]
 gi|253771714|ref|YP_003034545.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254038624|ref|ZP_04872680.1| high-affinity branched-chain amino acid transport system permease
           livH [Escherichia sp. 1_1_43]
 gi|254163381|ref|YP_003046489.1| branched-chain amino acid transporter permease LivH [Escherichia
           coli B str. REL606]
 gi|254795374|ref|YP_003080211.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli O157:H7 str. TW14359]
 gi|256020803|ref|ZP_05434668.1| branched-chain amino acid transporter permease subunit LivH
           [Shigella sp. D9]
 gi|256025819|ref|ZP_05439684.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia sp. 4_1_40B]
 gi|260846241|ref|YP_003224019.1| high-affinity branched-chain amino acid transport system, membrane
           component [Escherichia coli O103:H2 str. 12009]
 gi|260857563|ref|YP_003231454.1| high-affinity branched-chain amino acid transport system, membrane
           component [Escherichia coli O26:H11 str. 11368]
 gi|260870182|ref|YP_003236584.1| high-affinity branched-chain amino acid transport system, membrane
           component [Escherichia coli O111:H- str. 11128]
 gi|261224738|ref|ZP_05939019.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily protein [Escherichia coli O157:H7
           str. FRIK2000]
 gi|261254367|ref|ZP_05946900.1| high-affinity branched-chain amino acid transport system, membrane
           component [Escherichia coli O157:H7 str. FRIK966]
 gi|291284795|ref|YP_003501613.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O55:H7 str. CB9615]
 gi|293416861|ref|ZP_06659498.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli B185]
 gi|293453762|ref|ZP_06664181.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli B088]
 gi|297521419|ref|ZP_06939805.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli OP50]
 gi|300822741|ref|ZP_07102878.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 119-7]
 gi|300917213|ref|ZP_07133894.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 115-1]
 gi|300931004|ref|ZP_07146362.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 187-1]
 gi|300946796|ref|ZP_07161040.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 116-1]
 gi|300956791|ref|ZP_07169058.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 175-1]
 gi|301018541|ref|ZP_07182919.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 69-1]
 gi|301021804|ref|ZP_07185768.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 196-1]
 gi|301645898|ref|ZP_07245812.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 146-1]
 gi|307140139|ref|ZP_07499495.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli H736]
 gi|312972279|ref|ZP_07786453.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Escherichia coli 1827-70]
 gi|331644155|ref|ZP_08345284.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli H736]
 gi|331655037|ref|ZP_08356036.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli M718]
 gi|331670280|ref|ZP_08371119.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli TA271]
 gi|331679522|ref|ZP_08380192.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli H591]
 gi|332282008|ref|ZP_08394421.1| leucine/isoleucine/valine transporter subunit [Shigella sp. D9]
 gi|84027816|sp|P0AEX8|LIVH_ECO57 RecName: Full=High-affinity branched-chain amino acid transport
           system permease protein livH; AltName: Full=LIV-I
           protein H
 gi|84027817|sp|P0AEX7|LIVH_ECOLI RecName: Full=High-affinity branched-chain amino acid transport
           system permease protein livH; AltName: Full=LIV-I
           protein H
 gi|12518111|gb|AAG58564.1|AE005569_4 high-affinity branched-chain amino acid transport system; membrane
           component [Escherichia coli O157:H7 str. EDL933]
 gi|466593|gb|AAB18432.1| CG Site No. 552 [Escherichia coli str. K-12 substr. MG1655]
 gi|1789866|gb|AAC76482.1| leucine/isoleucine/valine transporter subunit [Escherichia coli
           str. K-12 substr. MG1655]
 gi|13363778|dbj|BAB37727.1| membrane component of high-affinity branched-chain amino acid
           transport system [Escherichia coli O157:H7 str. Sakai]
 gi|73857534|gb|AAZ90241.1| high-affinity branched-chain amino acid transport system; membrane
           component [Shigella sonnei Ss046]
 gi|81247229|gb|ABB67937.1| high-affinity branched-chain amino acid transport system membrane
           component [Shigella boydii Sb227]
 gi|85676586|dbj|BAE77836.1| leucine/isoleucine/valine transporter subunit [Escherichia coli
           str. K12 substr. W3110]
 gi|157068613|gb|ABV07868.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli HS]
 gi|157077444|gb|ABV17152.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli E24377A]
 gi|169753239|gb|ACA75938.1| inner-membrane translocator [Escherichia coli ATCC 8739]
 gi|169890806|gb|ACB04513.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Escherichia coli str. K-12 substr.
           DH10B]
 gi|187430813|gb|ACD10087.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Shigella boydii CDC 3083-94]
 gi|187771759|gb|EDU35603.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC4196]
 gi|188018258|gb|EDU56380.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC4113]
 gi|188489945|gb|EDU65048.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli 53638]
 gi|189002358|gb|EDU71344.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC4076]
 gi|189358880|gb|EDU77299.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC4401]
 gi|189364684|gb|EDU83103.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC4486]
 gi|189369548|gb|EDU87964.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC4501]
 gi|189374672|gb|EDU93088.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC869]
 gi|189379968|gb|EDU98384.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC508]
 gi|190902656|gb|EDV62388.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli B7A]
 gi|192932672|gb|EDV85269.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli E22]
 gi|192957879|gb|EDV88322.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli E110019]
 gi|194414965|gb|EDX31235.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli B171]
 gi|194420730|gb|EDX36806.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Shigella dysenteriae 1012]
 gi|208726914|gb|EDZ76515.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC4206]
 gi|208735275|gb|EDZ83962.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC4045]
 gi|208739225|gb|EDZ86907.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC4042]
 gi|209162025|gb|ACI39458.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. EC4115]
 gi|209756078|gb|ACI76351.1| membrane component of high-affinity branched-chain amino acid
           transport system [Escherichia coli]
 gi|209756080|gb|ACI76352.1| membrane component of high-affinity branched-chain amino acid
           transport system [Escherichia coli]
 gi|209756082|gb|ACI76353.1| membrane component of high-affinity branched-chain amino acid
           transport system [Escherichia coli]
 gi|209756084|gb|ACI76354.1| membrane component of high-affinity branched-chain amino acid
           transport system [Escherichia coli]
 gi|209756086|gb|ACI76355.1| membrane component of high-affinity branched-chain amino acid
           transport system [Escherichia coli]
 gi|217322587|gb|EEC31011.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O157:H7 str. TW14588]
 gi|218353872|emb|CAV00261.1| leucine/isoleucine/valine transporter subunit ; membrane component
           of ABC superfamily [Escherichia coli 55989]
 gi|218362774|emb|CAR00400.1| leucine/isoleucine/valine transporter subunit ; membrane component
           of ABC superfamily [Escherichia coli IAI1]
 gi|226839130|gb|EEH71153.1| high-affinity branched-chain amino acid transport system permease
           livH [Escherichia sp. 1_1_43]
 gi|238861640|gb|ACR63638.1| leucine/isoleucine/valine transporter subunit [Escherichia coli
           BW2952]
 gi|242378978|emb|CAQ33776.1| livH, subunit of branched chain amino acids ABC transporter and
           leucine ABC transporter [Escherichia coli BL21(DE3)]
 gi|253322758|gb|ACT27360.1| inner-membrane translocator [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253975282|gb|ACT40953.1| leucine/isoleucine/valine transporter subunit [Escherichia coli B
           str. REL606]
 gi|253979438|gb|ACT45108.1| leucine/isoleucine/valine transporter subunit [Escherichia coli
           BL21(DE3)]
 gi|254594774|gb|ACT74135.1| leucine/isoleucine/valine transporter subunit; membrane component
           of ABC superfamily [Escherichia coli O157:H7 str.
           TW14359]
 gi|257756212|dbj|BAI27714.1| high-affinity branched-chain amino acid transport system, membrane
           component [Escherichia coli O26:H11 str. 11368]
 gi|257761388|dbj|BAI32885.1| high-affinity branched-chain amino acid transport system, membrane
           component [Escherichia coli O103:H2 str. 12009]
 gi|257766538|dbj|BAI38033.1| high-affinity branched-chain amino acid transport system, membrane
           component [Escherichia coli O111:H- str. 11128]
 gi|260447527|gb|ACX37949.1| inner-membrane translocator [Escherichia coli DH1]
 gi|290764668|gb|ADD58629.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli O55:H7 str. CB9615]
 gi|291321888|gb|EFE61319.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli B088]
 gi|291431437|gb|EFF04422.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli B185]
 gi|299881437|gb|EFI89648.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 196-1]
 gi|300316430|gb|EFJ66214.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 175-1]
 gi|300399660|gb|EFJ83198.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 69-1]
 gi|300415496|gb|EFJ98806.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 115-1]
 gi|300453553|gb|EFK17173.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 116-1]
 gi|300461182|gb|EFK24675.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 187-1]
 gi|300524741|gb|EFK45810.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 119-7]
 gi|301075887|gb|EFK90693.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 146-1]
 gi|309703863|emb|CBJ03204.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Escherichia coli ETEC H10407]
 gi|310334656|gb|EFQ00861.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Escherichia coli 1827-70]
 gi|315138031|dbj|BAJ45190.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli DH1]
 gi|320175713|gb|EFW50801.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Shigella dysenteriae CDC 74-1112]
 gi|320181949|gb|EFW56855.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Shigella boydii ATCC 9905]
 gi|320187777|gb|EFW62452.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Shigella flexneri CDC 796-83]
 gi|320191526|gb|EFW66176.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Escherichia coli O157:H7 str. EC1212]
 gi|320199633|gb|EFW74223.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Escherichia coli EC4100B]
 gi|320639739|gb|EFX09333.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli O157:H7 str. G5101]
 gi|320645238|gb|EFX14254.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli O157:H- str. 493-89]
 gi|320650549|gb|EFX19015.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli O157:H- str. H 2687]
 gi|320655742|gb|EFX23665.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320661525|gb|EFX28940.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|320666548|gb|EFX33531.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli O157:H7 str. LSU-61]
 gi|323154294|gb|EFZ40497.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Escherichia coli EPECa14]
 gi|323162696|gb|EFZ48535.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Escherichia coli E128010]
 gi|323164785|gb|EFZ50577.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Shigella sonnei 53G]
 gi|323179017|gb|EFZ64591.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Escherichia coli 1180]
 gi|323182921|gb|EFZ68322.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Escherichia coli 1357]
 gi|323934557|gb|EGB30957.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli E1520]
 gi|323939325|gb|EGB35536.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli E482]
 gi|323944321|gb|EGB40396.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H120]
 gi|324116345|gb|EGC10264.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli E1167]
 gi|326337574|gb|EGD61409.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Escherichia coli O157:H7 str. 1044]
 gi|326344675|gb|EGD68424.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Escherichia coli O157:H7 str. 1125]
 gi|331036449|gb|EGI08675.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli H736]
 gi|331047052|gb|EGI19130.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli M718]
 gi|331062342|gb|EGI34262.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli TA271]
 gi|331072694|gb|EGI44019.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli H591]
 gi|332085741|gb|EGI90905.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Shigella dysenteriae 155-74]
 gi|332090525|gb|EGI95623.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Shigella boydii 3594-74]
 gi|332104360|gb|EGJ07706.1| leucine/isoleucine/valine transporter subunit [Shigella sp. D9]
 gi|332345411|gb|AEE58745.1| high-affinity branched-chain amino acid transport system permease
           BraD [Escherichia coli UMNK88]
          Length = 308

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|330951898|gb|EGH52158.1| inner-membrane translocator [Pseudomonas syringae Cit 7]
          Length = 300

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 92/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + V+ A GL+IV G +G++++      A+G+Y   +    +      L+    +I
Sbjct: 14  FSLFSVLVLMALGLTIVFGLMGVINMAHGELMAMGSYMTYVTSVVFQRYFPELMGWYFII 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 ++                 + +     +L  W      +           +   
Sbjct: 74  GIGMAFVVTFAFGLLLERCF--IRFMYNRPLDTLLATWGLSLVLQQLFRQVFGPKEVSVP 131

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               ++     S  +   +   +++     ++A++ L+L R+      R +  N+    +
Sbjct: 132 TVQWLQGAWKISDGLELPLNRIFIIGLTFVIAAAVFLFLYRSRWGLRIRAVTQNRAMAGA 191

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     G+AG+ F       +  +      +    +V+ GG+ SL 
Sbjct: 192 AGINTAGVDSVTFALGCGLAGIAGSSFTMLAS--TGPVSGQQYLVDTFIVVVFGGVESLL 249

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +         +        +               + + +++  R + L   
Sbjct: 250 GTFLSAFAIGQTQVSLEYLTTGSMAKAITL-------------LVVIVLLFFRPNGLFAT 296

Query: 343 R 343
           +
Sbjct: 297 K 297


>gi|300815341|ref|ZP_07095566.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 107-1]
 gi|300532233|gb|EFK53295.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 107-1]
          Length = 308

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 99/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+GA G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIAGAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|294791635|ref|ZP_06756783.1| branched-chain amino acid ABC transporter, permease protein
           [Veillonella sp. 6_1_27]
 gi|294456865|gb|EFG25227.1| branched-chain amino acid ABC transporter, permease protein
           [Veillonella sp. 6_1_27]
          Length = 293

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 100/308 (32%), Gaps = 27/308 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GL++V G L ++++     + IGA+  + + + + ++I++ + V
Sbjct: 6   LVNGLTLGSLYAVLAIGLTLVFGVLNIINMAHGGIFMIGAFVGLFMVTVFNVNIFVALIV 65

Query: 99  SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           +  +    G ++   +     +     +A LI +      L     +  G          
Sbjct: 66  AMAVGAILGYLLEFVALRPLRKKKVSHLAPLISTIGVSIFLESLALLLWGPQTRSFPPDY 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   +            +  + M  + + +           ++T I  A R +  +
Sbjct: 126 IGGLIDFGAFKISMVQIIGLGVSVVLMLILNVVI-----------KKTKIGKAIRAVSMS 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    L             ++SA    AG     S + I P M         ++++ILG
Sbjct: 175 TETAALLGINPTMIISITVMIASALGAAAGVLVGLSFNAIEPTM-GVIIGFKGLAVLILG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +++       IL              F   + F               + L++  R 
Sbjct: 234 GLGNITGAMVGGFILGVAEIFSVAYGASTFRDAVAFG-------------LIILLLFWRP 280

Query: 337 HSLLRLRT 344
             L   + 
Sbjct: 281 QGLFGSKD 288


>gi|158423062|ref|YP_001524354.1| branched-chain amino acid uptake ABC transporter permease protein
           [Azorhizobium caulinodans ORS 571]
 gi|158329951|dbj|BAF87436.1| branched-chain amino acid uptake ABC transporter permease protein
           [Azorhizobium caulinodans ORS 571]
          Length = 332

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 55/304 (18%), Positives = 113/304 (37%), Gaps = 27/304 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            ++  +++        L +V G  G+ +L     Y  GAY+  I  +RYG+   L +   
Sbjct: 43  LALLTRLIAIAFLVLSLDLVTGYCGVATLGHAALYGAGAYAAGIASARYGIEDPLAMTGI 102

Query: 100 AMIS-GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            ++     G++ G+  L+  G    + ++ +  +F     K    T G  G+        
Sbjct: 103 GLVGGALAGLVCGVVILRAHGLPQLVLSIALVYLFHEFANKASGWTGGSDGLSGVTTGPL 162

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G               F +Y    Y   +G+  L+  ++  L R+      R I+++  
Sbjct: 163 FGR------------FEFDLYGHTAYLYAVGLLLLTLIVLRLLVRSPFGMLCRGIKEDPV 210

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              ++  +   A L  + +S A  G+ GA  A S   ++ D   F+++   + +++LGG 
Sbjct: 211 RIQAMGASPKAALLKMYVISGAVAGIGGALNAISTQVVALDSLSFTQSAEALVMLVLGGT 270

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL      T +     +     N +++               T++ + L   +L     
Sbjct: 271 GSLFGALVGTVVFTLFEDFVSAANPFHW--------------LTVVGLLLIATVLFAPKG 316

Query: 339 LLRL 342
           L   
Sbjct: 317 LYGT 320


>gi|330939913|gb|EGH43124.1| inner-membrane translocator [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 269

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 72/277 (25%), Gaps = 14/277 (5%)

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           ++      Y I AY   I  +          P   + +    +++               
Sbjct: 1   INFAHGDVYMISAYLAAIGLAVLSFFGVESFPFLILGTLIFTIVVTGVYGFVIERVAYKP 60

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
               + +   I      +                  T+      F   S FV       +
Sbjct: 61  LRNSTRLAPLISAIGISLILQNYAQISQGARQQGVPTLLEGAWRFEVGSGFVQITYTKIF 120

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +L+        +   ++ T +    R  + ++K    L           F + +A   +A
Sbjct: 121 ILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRKMASILGINTDRVISYVFIIGAAMAALA 180

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G     +          F   I   +  +LGG+ SL        IL        G+    
Sbjct: 181 GVLITMNYGTFDFYA-GFIIGIKAFTAAVLGGIGSLPGAMLGGLILGVAESQFSGLINSD 239

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +  +  F               L L+++ R   LL  
Sbjct: 240 YKDVFSFG-------------LLVLILIFRPQGLLGR 263


>gi|217978162|ref|YP_002362309.1| urea ABC transporter, permease protein UrtC [Methylocella
           silvestris BL2]
 gi|217503538|gb|ACK50947.1| urea ABC transporter, permease protein UrtC [Methylocella
           silvestris BL2]
          Length = 361

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 57/327 (17%), Positives = 102/327 (31%), Gaps = 28/327 (8%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-- 87
           L       Y  ++  + L   + A GL ++ G  G+LSL   + + +G Y   +   +  
Sbjct: 22  LAPWLVSAYTLTLLGRFLAMSILAIGLVLLWGEAGILSLGQGVFFGLGGYVIAMNLKQAT 81

Query: 88  ---------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF---QN 135
                       S    +P    I     +      L         + L+          
Sbjct: 82  LGEGEIPDFMTWSGLDALPWWWTIFSHPLLATLGVILVPAAVGAVFSWLVFRRRVGGVYF 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            LI           +    +       +      F F    +     +Y+V + +   + 
Sbjct: 142 ALITQALALCFATLLVSQQQYTGGFNGLTDFKTLFGFDLGAIGTIYTLYWVTVALVVAAF 201

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +I  WL  T      R  RD +     L       K+ AF +++AF G+AGA F      
Sbjct: 202 AITYWLLATRYGKLLRATRDGENRVRFLGYDPAPYKVIAFTIAAAFAGVAGALFTLHAGV 261

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +SP +     +I ++  V +GG  SL      T I+    +              +   +
Sbjct: 262 VSPALVGVVPSIEMVIWVAIGGRKSLWGAIAGTLIVNFARD--------------QISSA 307

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                   + +A  LV+      L  L
Sbjct: 308 LPSLWLYALGLAFVLVVTFLPEGLAGL 334


>gi|157149040|ref|YP_001456359.1| branched-chain amino acid transporter permease subunit LivH
           [Citrobacter koseri ATCC BAA-895]
 gi|157086245|gb|ABV15923.1| hypothetical protein CKO_04879 [Citrobacter koseri ATCC BAA-895]
          Length = 308

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +       +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIIIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ L++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWIIGSSENFAASITTMQLVIWIVTFLAMLALTLFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|146297471|ref|YP_001181242.1| inner-membrane translocator [Caldicellulosiruptor saccharolyticus
           DSM 8903]
 gi|145411047|gb|ABP68051.1| urea ABC transporter membrane protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 303

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 88/262 (33%), Gaps = 4/262 (1%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             I +      IY++ A GL I  G + ++++       +GAY+  ++ + +        
Sbjct: 9   SNIFNALSVGSIYILIAMGLVITFGLMKIINMAHGEFIMLGAYTTYVIQNVFEKYWKSFF 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +++     I+G     F      I   +      ++L+ W      +  +      
Sbjct: 69  DYYILVAIPVAFIVGFLIGVFIEK--TIVKRLYERTLDSLLLTWGISLILQQLVRNIFGA 126

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
             +       +      +S +       ++L+    L   + + L +T I    + +  N
Sbjct: 127 PNVEVKTPQWMSKQINFASHLFIPSRRLFILVVAISLLILMFILLNKTVIGLRIKAVLQN 186

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +L          +F + +   G+AG                 +  I    IVILG
Sbjct: 187 REIASALGINSEEIDSLSFGIGTGLAGVAGCCLTILGPI--GPSMGTNYIIDAFMIVILG 244

Query: 277 GMTSLSKIAKATAILIGVVELC 298
           GM  L  +  ++ I+  +    
Sbjct: 245 GMGYLPGVIISSLIIGFLKTFF 266


>gi|262164757|ref|ZP_06032495.1| ribose ABC transport system permease protein RbsC [Vibrio mimicus
           VM223]
 gi|262173033|ref|ZP_06040710.1| ribose ABC transport system permease protein RbsC [Vibrio mimicus
           MB-451]
 gi|261890391|gb|EEY36378.1| ribose ABC transport system permease protein RbsC [Vibrio mimicus
           MB-451]
 gi|262027137|gb|EEY45804.1| ribose ABC transport system permease protein RbsC [Vibrio mimicus
           VM223]
          Length = 327

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALLFLVVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +     +  +       +    +   + +                + F  
Sbjct: 88  LCGAFAASLIAMEVPVLLAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYALGIPVPVWLMVVVFAGAWYL 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 196 L-----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLV 322


>gi|154245564|ref|YP_001416522.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154159649|gb|ABS66865.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 290

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 97/304 (31%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + + GL+++ G + +++        +G Y+  +L +++GL  +     
Sbjct: 8   VLNGILLGSMYAIISVGLTLIFGIVRVVNFAHGEFLMVGMYAAYLLAAKFGLHPYASAIP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++  A G ++    ++          +  +      L+    +  G     V      
Sbjct: 68  VVLLLFALGALVQRFLIQPLLSADEHIQIFATVGLSTALVNLALLLFGADLYSVPPSAAQ 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V                      + +    L A + L+++ TA+  A R    N+ 
Sbjct: 128 GSVQVAGFTLVKG-----------QIVMFVCALALVAGLHLFMQSTALGRAIRATAQNRN 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    + AF + +A +G+A A               F        +V+LGGM
Sbjct: 177 AALLMGVKVDKIYVIAFGMGAACVGLASALVMPLYPVTPTIGTYFVLT--AFVVVVLGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  V  L                         +      L+++ +   
Sbjct: 235 RSMYGAFFGAMIIGLVDSLSGYYI-------------APDLKEVVYFALFLLILIFKPTG 281

Query: 339 LLRL 342
           L  L
Sbjct: 282 LFGL 285


>gi|316935597|ref|YP_004110579.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315603311|gb|ADU45846.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 433

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/329 (14%), Positives = 114/329 (34%), Gaps = 32/329 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
              +   L  L L    +     +    + I ++FA   +I++G  G+LS    + Y +G
Sbjct: 23  AIWIATALALLLLPKVFASGGSLTTFSLVGISIIFALSYNILLGQTGMLSFGHAVYYGLG 82

Query: 78  AY-----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            +       ++ G+++ + + L+  +  +       ++G    +  G   A+ +L ++E+
Sbjct: 83  GFLAIHIINILAGNKFPIPLPLVPLIGGVAGLFFAALIGWVMTQRSGTAFAMISLGLAEL 142

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             +  +  +    G+AGI              +  + FR        +I +YY++     
Sbjct: 143 VASSALILRSFFGGEAGIS------------ANRTKLFRVFDLSFGPQIQIYYLVAAWTL 190

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           ++   +  L RT +      +RDN +    +       +  AF  S  F G+AGA  A +
Sbjct: 191 IAIIAMYALTRTPLGRMCNAVRDNPERVQFVGYDPHVVRYLAFCFSGFFAGIAGALAAIN 250

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
            +  +       ++  V+    +GG+            +  +      +           
Sbjct: 251 FEIANSAYLGAVQSGTVLFAAYIGGIGFFIGPIVGAIFVTVLSLALSDL----------- 299

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                        +   +V+L     +  
Sbjct: 300 ----TQVWQLYFGLFFIIVVLFAPGGITG 324


>gi|218781783|ref|YP_002433101.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218763167|gb|ACL05633.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 301

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 101/305 (33%), Gaps = 16/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L L++      + IGA+  + L + + L+  L   +
Sbjct: 8   LTNGLAIGGIYALIALGYTLVYGVLKLINFAHGDLFTIGAFLGLSLLTAFSLTDKLGFAM 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                    + +                     +  + ++    ++   +   +      
Sbjct: 68  GVGALVLMIVCLVGIIGILLDQAAYKPLRTSPRL--SAVVSALGMSIVFSNAIMLVFGPN 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  ++         + + +    +L+    L A++  ++++T I  A R    +Q 
Sbjct: 126 PQVYPHGILPTSVLHIFGLPFPVKRLLLLVTSVVLMAALYFFIQKTTIGAAIRAAAIDQD 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    +  F +  A  G AG        +I   M  +   +   +  ILGG+
Sbjct: 186 AARLMGINVNLVIMLIFFIGPALGGAAGVMVGLYYGQIKWTM-GWLYGLKAFTAAILGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L  +  L        +   + F             + L L++++R   
Sbjct: 245 GNIPGAMVGGLLLGVIESLGSAYISMAWKDAITF-------------VVLILILIVRPTG 291

Query: 339 LLRLR 343
           LL  R
Sbjct: 292 LLGER 296


>gi|149913230|ref|ZP_01901764.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Roseobacter sp. AzwK-3b]
 gi|149813636|gb|EDM73462.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Roseobacter sp. AzwK-3b]
          Length = 308

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 96/307 (31%), Gaps = 21/307 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   +  + A GLS+V G + ++++     + +GA     +    G    L    + ++
Sbjct: 15  AVTAAVLALTAVGLSLVFGVMRVVNIAHGEFFMLGAVIAWYVAHWMGGHPALGFVAALVV 74

Query: 103 SGACGMIMGLPSLKF---RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF- 158
           +      + + +      R DY    T++ +     I+ +   ++ G     V       
Sbjct: 75  APLLVGAIAVAADMTILKRLDYDPERTIVATIGLLYIIQQLTLMSYGPEARPVEAPFNQR 134

Query: 159 --LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
             L    R    +  +    +    +   V+     +   +   + RT I    R  + +
Sbjct: 135 IALPWIERGESGWQFYYPWGLSTTSYKLAVIGAAGAVLCGVWALMTRTRIGLVMRATQAD 194

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +    +       F + +    +A       +      +      ++   +VI+G
Sbjct: 195 REMAVAFGIPVEKVYALVFGLGAGLAALAAVLIVPIQQA--HYLMGADPLLLSFIVVIIG 252

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ SL     A  ++     +                         L  + + LV++ R 
Sbjct: 253 GLGSLPGTVLAAVLIGLSDGIISVFFSPTLAE-------------ILATLLVGLVLVFRP 299

Query: 337 HSLLRLR 343
             L   R
Sbjct: 300 QGLFGTR 306


>gi|148378457|ref|YP_001252998.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium botulinum A str. ATCC 3502]
 gi|153934087|ref|YP_001382846.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium botulinum A str. ATCC 19397]
 gi|153936150|ref|YP_001386413.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium botulinum A str. Hall]
 gi|148287941|emb|CAL82007.1| branched-chain amino acid transport system,permease protein
           [Clostridium botulinum A str. ATCC 3502]
 gi|152930131|gb|ABS35631.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium botulinum A str. ATCC 19397]
 gi|152932064|gb|ABS37563.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium botulinum A str. Hall]
          Length = 290

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 106/304 (34%), Gaps = 25/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G +++ G L +L+         G + +  + S + + + L I +
Sbjct: 6   LVNGITLGSIYCLAALGFNMIFGVLKMLNFAHGEILMFGTFVFFTMISIFKIPLILAIIL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I+G  G+++ L + K      A+A L+ S     +L     +  G            
Sbjct: 66  TIVITGLIGVLLYLIAYKPVLKGDAMAPLLSSLGVSIMLEALGQLIWGTE---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    +  + +       ++ L    L   +  ++ ++ I    R +  N+K
Sbjct: 116 -IIPFPINIPKGIYSIASIKLSNIQIFIFLFSITLMIILYKFITKSNIGLQIRALSYNRK 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        +  F++++    ++G   +   D +   M      I   +  ILGG+
Sbjct: 175 YAELMGIETDKITMIVFSLATILAMVSGILSSMYYDALYVTM-GSGVMIKAFAAAILGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL     L        +   + F             I L LV++++ + 
Sbjct: 234 GSIPGALVGGYILGVSESLVGAYISTSYVDGIAF-------------IILVLVLIIKPNG 280

Query: 339 LLRL 342
           +   
Sbjct: 281 IFGE 284


>gi|319791077|ref|YP_004152717.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315593540|gb|ADU34606.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 306

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 102/309 (33%), Gaps = 15/309 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL++V G + +L+L     +  GAY      +R           
Sbjct: 10  LLNGLGYGLMLFLLAAGLTLVFGIMDVLNLAHGSLFMSGAYVAAEAHTRT---------- 59

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            +  +     +     +    + L +  L   +    +L  +  I      + +A     
Sbjct: 60  GSFTAAIVIAVAVTVVVALLLEVLLMRRLYTRDHLAQVLATFGVILVADDIVKMAWGPSP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           + +   + +         + Y  +   +L+G   ++ ++ L +  T I    R    ++ 
Sbjct: 120 VMSPTPAALSGPVNLMDGLPYPAYRLVILIGGLLVALALYLLVNHTRIGMRVRAGASDRP 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + +A   +AGA                +  I  + ++++GG+
Sbjct: 180 MAELMGVRVGRIFNGVFLLGAALAALAGALMGPIVAV--QVGMGEAILIPALVVLVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335
            S+     A  ++  V  +          + L    +     +     M   + +V++ R
Sbjct: 238 GSVRGAFVAALLVGVVDTIGRAFVPMLLRATLPPATAADLGPLFAEVAMYALMVIVLIFR 297

Query: 336 SHSLLRLRT 344
              L   RT
Sbjct: 298 PSGLFSART 306


>gi|254720746|ref|ZP_05182557.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella sp. 83/13]
 gi|265985802|ref|ZP_06098537.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306839300|ref|ZP_07472116.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella sp. NF 2653]
 gi|264664394|gb|EEZ34655.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306405548|gb|EFM61811.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella sp. NF 2653]
          Length = 315

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 55/324 (16%), Positives = 106/324 (32%), Gaps = 38/324 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             +     +        +   +  +    LI    A   +I+ G  G  S    + Y +G
Sbjct: 6   ALLAIIAAVLALGAPLFASPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGLG 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AYS  I   ++ L  +    +  + +    M++GLP L  +G Y AIATL + ++   I 
Sbjct: 66  AYSAGIAMVQFNLPFFAGAAIGIVAAVVFVMLIGLPILHLKGHYFAIATLALPQVMAAIT 125

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                                    V             +  + F Y   L +  ++  +
Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L R+        IR+N++   ++       K+ A  +S AF  MAGA  A     + 
Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMGINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222

Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P+       N+ +I + + GG  ++         L  V                    ++
Sbjct: 223 PEAAYQVQLNVQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLST--------------AY 268

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
                    I + + +++    L 
Sbjct: 269 TDVAGMFFGIVIVVAVVLMPRGLA 292


>gi|167769501|ref|ZP_02441554.1| hypothetical protein ANACOL_00835 [Anaerotruncus colihominis DSM
           17241]
 gi|167668469|gb|EDS12599.1| hypothetical protein ANACOL_00835 [Anaerotruncus colihominis DSM
           17241]
          Length = 302

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 87/311 (27%), Gaps = 18/311 (5%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
           G       + +      IY + A G ++V G + L++        +GAY  +        
Sbjct: 3   GLFVFINQLINGLQVGSIYALVALGYTMVYGIVKLINFAHGDFIMVGAYLALFSVPMLLG 62

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           +    I V  ++     +   L  +              S       I            
Sbjct: 63  AGLPAILVIVLVIVMSVIGCSLLGMATERIAYKPLRGSPSLSVLITAIAVSLFLE----N 118

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                         ++I         +         +         + L++++T +  A 
Sbjct: 119 LFMILFSSASKPFPAIISANPISIGKIQTNAVTIITIALSIVCMICLQLFIKKTRMGKAM 178

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R + ++  A   +           FA+ S    +A   + ++   ++P M      +   
Sbjct: 179 RAVSEDAGAAMLMGCNSNVTISMTFAIGSGLAAVAAVMYCSAYPLVNPYM-GSMLGLKAF 237

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
              +LGG+  +        ++  V  L       Y    + F               L +
Sbjct: 238 IAAVLGGIGIIPGAMLGGFVIGLVESLTKAYISSYLADAVVFG-------------ILIV 284

Query: 331 VILMRSHSLLR 341
           V+L++   +L 
Sbjct: 285 VLLVKPTGILG 295


>gi|254284852|ref|ZP_04959819.1| ribose transport system permease protein RbsC [Vibrio cholerae
           AM-19226]
 gi|150425637|gb|EDN17413.1| ribose transport system permease protein RbsC [Vibrio cholerae
           AM-19226]
          Length = 322

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 24  LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +     +  +       +    +   + +                + F  
Sbjct: 83  LCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 131 TLVTMTLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYALGIPVPVWLMVVVFAGAWYL 190

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 191 L-----NHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 245

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 246 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 305

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 306 AKAVVILLAVLV 317


>gi|90424512|ref|YP_532882.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90106526|gb|ABD88563.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 350

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 98/287 (34%), Gaps = 3/287 (1%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +   +LL        S  Y     +   ++V  A  L ++ G  G LS      + I  Y
Sbjct: 22  LFGVVLLSALAYPLISDGYTVGNTVYFFVWVFIALSLCLIWGYGGALSFGQTAFFGIAGY 81

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           SY IL   +G +  L +    +  G   ++  L         +    L +  +   ++++
Sbjct: 82  SYGILTINFGSAYGLTLVAMLLAIGVAALVAVLLGYFMFFGRIEGVFLGIVTLAVTLMLE 141

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE---IFMYYVLLGMCFLSAS 196
                       +          +  +           I     + +YY +LG+  +   
Sbjct: 142 RFMAQTAGPEWRIGSARLNGFNGMSGMPPLTIPWFDGPIVLFADVGLYYFVLGLVIVVYL 201

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L  ++  N    IR+N +    L   I   +L  F + +A  GM+G  + A    I
Sbjct: 202 GLRILVNSSFGNVIVAIRENPQRAEMLGYDIRKFQLINFVIGAALAGMSGVLYTAWGQYI 261

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           +P     +   + +  V +GG + L+     T +++   +       
Sbjct: 262 TPSSMGMTSAALPLIWVAVGGRSDLTSTVIGTLLVLAGFQALTIYGS 308


>gi|320535907|ref|ZP_08035978.1| amino acid or sugar ABC transport system, permease protein
           [Treponema phagedenis F0421]
 gi|320147244|gb|EFW38789.1| amino acid or sugar ABC transport system, permease protein
           [Treponema phagedenis F0421]
          Length = 581

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/295 (12%), Positives = 92/295 (31%), Gaps = 23/295 (7%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
                 G   S   I ++  Q  + + +A G++ ++   G   L+     A+GA    ++
Sbjct: 264 APLSGNGNLLSLPNILTILEQSSVRMFYAIGVAGIILLAG-TDLSVGRMVAMGAIITGLI 322

Query: 85  -------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY--LAIATLIMSEIFQN 135
                   + +G   W    ++ +      + + + S      +     A L +      
Sbjct: 323 LHPGQNIVTFFGFGPWDFTHIAMIWRVLMSLGISIISCVLFSIFAGFFSARLKIHPFIST 382

Query: 136 ILIKWKP---ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           +  +      +  G +G  V      +   +           + + +   +   ++ +  
Sbjct: 383 LATQLMIYGILFFGTSGTPVGPIDNSIKELLGGRWILGVVNGNLITFPKLIIPAIIAIII 442

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
                     +T +      +  N +A      ++ +  +  F ++  F G  GAFF A 
Sbjct: 443 AWFI----WNKTILGKNMYAVGGNPEAASVSGISVFWVTMYVFIMAGVFYGF-GAFFEAF 497

Query: 253 RDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMN 302
           +   S    +  E   + + V+      GG+  L        I  G+      + 
Sbjct: 498 KANASAGTGQGYELDAIAACVVGGISFNGGIGKLEGAVIGVIIFTGLTYCLTFLG 552


>gi|23499793|ref|NP_699233.1| branched-chain amino acid ABC transporter permease [Brucella suis
           1330]
 gi|23463359|gb|AAN33238.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella suis 1330]
          Length = 406

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 50/311 (16%), Positives = 105/311 (33%), Gaps = 26/311 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                + + +  IQ+LI  +FA   S++ G  G+L       + +G+++ V   + +G  
Sbjct: 20  PYLVSESMTNAAIQMLIAALFATAFSLLCGQAGMLPFGHAAYFGLGSFAAVHAMNAFGGE 79

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L  P+  +     G++ GL +  F      +   +++     +L    P   G  G  
Sbjct: 80  GLLPTPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFGGE 139

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                + +                       +YY+ L     S  ++  L  T       
Sbjct: 140 AGVSSFRMPAW-----------GFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTV 188

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R+N      L   +       FA+S+ F G+AGA  A + +  +  +F+   +  V+ 
Sbjct: 189 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 248

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
              +GG+ +    A   A +     +   +   +                    +   LV
Sbjct: 249 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLIFVLV 293

Query: 332 ILMRSHSLLRL 342
           ++     L+  
Sbjct: 294 MMFLPRGLVGE 304


>gi|313114517|ref|ZP_07800031.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310623140|gb|EFQ06581.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 292

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 96/306 (31%), Gaps = 26/306 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ +       Y + A G ++V G L L++      + +  +  V   +   L+  + I
Sbjct: 7   PYLLAGISVGGQYALIAIGYTMVYGILRLINFAHGDIFTVAGFLMVYATASLPLT--ISI 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P+  + +   G+ +   + K       ++ +I +     +L        G          
Sbjct: 65  PLVVVATVLLGIAVEKIAYKPLRTAPRMSVMISAIGMSYLLQNSMWYVTGGLAKQYPALP 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +   +      +  V        ++L      A+++  +++T I  A R    +
Sbjct: 125 -----WISDTVTVLGCQTKRVTVVTPFLVIVLV-----AALVTLIQKTKIGMAMRAASRD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    +   I       FAV S    +    + ++   ++P +      +      + G
Sbjct: 175 FETAQLMGIKINNVISFTFAVGSFLAAIGSMMYFSNYTAVTPTV-GAMPGLKAFVAAVFG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        I+     L  G     F+    F               L +V+ ++ 
Sbjct: 234 GIGSIPGAVIGGFIIGICESLIKGAGATTFSDAFTF-------------ALLIVVLAVKP 280

Query: 337 HSLLRL 342
             L   
Sbjct: 281 TGLFSE 286


>gi|146279300|ref|YP_001169458.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025]
 gi|145557541|gb|ABP72153.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025]
          Length = 305

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 100/308 (32%), Gaps = 15/308 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     ++  + A GL++V G + +++L     Y  GAY         G  +  L+   
Sbjct: 10  LNGLQFGILLFLVAAGLTLVFGVMDVINLAHGSQYMAGAYLAAAFAGLTGSFLLGLLCAV 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +      ++  L   +          L+   +   +    + +                
Sbjct: 70  PLALAFGLILERLVIRRLYDRSHLDQVLVTFGLMLMLNEGVRLLWGSAPISVEMPEALSG 129

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +             + Y ++   +L     ++A++   + RT +    R    N+  
Sbjct: 130 SIPIWGN----------LRYPVYRLAILAAGLGVAAALWWAIHRTRMGMLLRAGASNRAM 179

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L T I    L  F   +   G AGA                +  I+   ++++GG+ 
Sbjct: 180 VSALGTDINRLFLLVFGAGAMLAGFAGAMMVPVVSA--EPDMGDTVLILTFVVIVIGGIG 237

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMRS 336
           S+     A  ++  V  L          SL++ D +     T    L+ I +  ++ +R 
Sbjct: 238 SIRGAFVAALLVGLVDTLGRTFGPILLRSLMEPDAASQTGRTLAPMLIYILMAAILAVRP 297

Query: 337 HSLLRLRT 344
             L  ++ 
Sbjct: 298 AGLFPVQR 305


>gi|148254637|ref|YP_001239222.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. BTAi1]
 gi|146406810|gb|ABQ35316.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 354

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/328 (15%), Positives = 110/328 (33%), Gaps = 17/328 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
              A+   +L         S  Y     +   ++V  A  LS++ G  G LS      + 
Sbjct: 22  AFWALFALVLAGALAYPLFSDGYTVGNTVYFFVWVFIALSLSLIWGYGGSLSFGQTAFFG 81

Query: 76  IGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           I  Y Y IL   +       W+ + ++  ++     ++G      R   + +  + ++  
Sbjct: 82  IAGYGYGILTINFGASYGFTWIALLLAIGMAALVAALLGYFMFFGRIGGVFLGIVTLAVT 141

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
                   +               +   + +  L   +      +  ++ +YYV+L M  
Sbjct: 142 LMLERFMAQTAGPEWRIGAARLNGFNGMSAMPPLTIPWFGGPIVLFADVGLYYVVLAMLV 201

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L    +  L  ++  N    IR+N +    L   I   +L  F + +A  G++G  +   
Sbjct: 202 LVYLALRILMNSSFGNVIVAIRENPERAEMLGYDIRKYQLITFVIGAALAGLSGVLYTVW 261

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              I+P     +   + +  V +GG + L+     T ++               +     
Sbjct: 262 GQYITPSSMGMTAASLPLIWVAVGGRSDLTATIIGTLVV--------------LSGFQAL 307

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLL 340
               +      M + L L +L+  + L+
Sbjct: 308 TIYGSQYALVFMGVLLVLTVLIAPNGLV 335


>gi|322804736|emb|CBZ02288.1| high-affinity branched-chain amino acid transport system permease
           protein LivH (TC 3.A.1.4.1) [Clostridium botulinum
           H04402 065]
          Length = 290

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 106/304 (34%), Gaps = 25/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G +++ G L +L+         G + +  + S + + + L I +
Sbjct: 6   LVNGITLGSIYCLAALGFNMIFGVLKMLNFAHGEILMFGTFVFFTMISIFKIPLILAIIL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I+G  G+++ L + K      A+A L+ S     +L     +  G            
Sbjct: 66  TIVITGLIGVLLYLIAYKPVLKGDAMAPLLSSLGVSIMLEALGQLIWGTE---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    +  + +       ++ L    L   +  ++ ++ I    R +  N+K
Sbjct: 116 -IIPFPINIPKGTYSIASIKLSNIQIFIFLFSITLMIILYKFIMKSNIGLQIRALSYNRK 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        +  F++++    ++G   +   D +   M      I   +  ILGG+
Sbjct: 175 YAELMGIETDKITMIVFSLATILAMVSGILSSMYYDALYVTM-GSGVMIKAFAAAILGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL     L        +   + F             I L LV++++ + 
Sbjct: 234 GSIPGALVGGYILGVSESLVGAYISTSYVDGIAF-------------IILVLVLIIKPNG 280

Query: 339 LLRL 342
           +   
Sbjct: 281 IFGE 284


>gi|298294169|ref|YP_003696108.1| inner-membrane translocator [Starkeya novella DSM 506]
 gi|296930680|gb|ADH91489.1| inner-membrane translocator [Starkeya novella DSM 506]
          Length = 292

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 98/307 (31%), Gaps = 26/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I    Y +   GL+++ G + +++      YA GAY    +    G++ ++ I  
Sbjct: 10  LANTLIMGGTYALLGIGLTLIFGIMRVVNFTHGELYAFGAYGLYFVAVVLGMNFYVSILF 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G ++ L  L+ +       T+++      +L   + +  G     +      
Sbjct: 70  AIAGGMVLGALIELVLLRPKRGADIDTTMLLMIGAWIVLQNTEHLAWGSIAKSIPSPFPT 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +       +V      L  +    + RT + NA R    +  
Sbjct: 130 -----------EPLVIGPISLSWLRIFVFGVAILLIIATYFLINRTRLGNAMRATFQDTD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   I       FA+ S     AGA        +         ++   +IVILGG+
Sbjct: 179 TAALMGVNIRAIYTMTFALGSGLAAAAGALLGPV--FVVTPTMGDLASLKAFAIVILGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +++       IL  V E+  G     +   + F             + + +V+L R   
Sbjct: 237 GNITGATIGGFILAFVEEIGAGYISSGYRDAMGF-------------LIIIVVLLFRPTG 283

Query: 339 LLRLRTP 345
           +      
Sbjct: 284 IFARVER 290


>gi|157150789|ref|YP_001450906.1| branched-chain amino acid permease protein [Streptococcus gordonii
           str. Challis substr. CH1]
 gi|262283200|ref|ZP_06060967.1| branched-chain amino acid permease [Streptococcus sp. 2_1_36FAA]
 gi|157075583|gb|ABV10266.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus gordonii str. Challis substr. CH1]
 gi|262261452|gb|EEY80151.1| branched-chain amino acid permease [Streptococcus sp. 2_1_36FAA]
          Length = 289

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/289 (16%), Positives = 101/289 (34%), Gaps = 12/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L +   L+ +L + V
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIKLINFAHGDIYMMGAFMGYFLINSLKLNFFLALIV 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +   +   IA LI +     +L        G +          
Sbjct: 65  AMIGTAILGVVIEFLAYRPLRNSTRIAALITAIGVSFLLEYLMVYFVGAS---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I   RF    +        +L    FL  ++   +++T +  A R +  +  
Sbjct: 115 -TLPFPQVIPTVRFNLGPITVSNIQLMILGISIFLMLALQFIVQKTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG   A   + + P M   +  I      +LGG+
Sbjct: 174 AAQLMGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GMTPGIKSFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +   A    ++  +           F   + +     +       I 
Sbjct: 233 GIIPGAALGGFVIGLLETFATAFGMSDFRDAIVYGILIIILLIRPAGIL 281


>gi|126726247|ref|ZP_01742089.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacterales bacterium HTCC2150]
 gi|126705451|gb|EBA04542.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacterales bacterium HTCC2150]
          Length = 392

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/364 (12%), Positives = 95/364 (26%), Gaps = 36/364 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I+     V   L     G       +     + L   + A  + ++ G  G+LSL  +  
Sbjct: 20  IILASFTVLVTLGSEAFGTGFVSTSLVKTLGKTLCLCLVALAMDLIWGYCGILSLGHIAF 79

Query: 74  YAIGAYSYVILGSRYGLSIWLL-------------------------------IPVSAMI 102
           + +G Y   +        + ++                                P   M 
Sbjct: 80  FGLGGYMIGMWLMYERTRLIVMQAAENTQLPMTPQEIQDAVGSQIFGVVGGSEFPAIWMF 139

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           S    + + +  +      L    L        + +         A      +       
Sbjct: 140 SHLLSVQLLMVVMVPGVLALIFGWLAFRSRVTGVYLSILTQAMTLALALYLFQNDSGLRG 199

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR----TAISNAWRTIRDNQK 218
              L      P      +  +          +  +     +    + + N  R IRD++ 
Sbjct: 200 NNGLSGLQNLPGRDDTPQSVISMWFFWGSAFALGLGYLCAKLIVESKMGNVMRGIRDDEA 259

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +   KL  F +++    +AGA +      I+P       +I +   V +GG 
Sbjct: 260 RVRFLGYNVEAYKLFIFTLTAIIAAVAGALYYPQAGIINPAEIAPIASIYLAVWVAIGGR 319

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L       A++  +     G               +      L+ ++   V L     
Sbjct: 320 GRLYGAVIGAAVVSLLSSWFTGGQAPDIPLGFA-TLKWVDWWLVLLGLSFVFVTLYAHKG 378

Query: 339 LLRL 342
           +  L
Sbjct: 379 IGGL 382


>gi|269127695|ref|YP_003301065.1| inner-membrane translocator [Thermomonospora curvata DSM 43183]
 gi|268312653|gb|ACY99027.1| inner-membrane translocator [Thermomonospora curvata DSM 43183]
          Length = 743

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/327 (14%), Positives = 111/327 (33%), Gaps = 11/327 (3%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +         L+  ++L +   +    +     + + + A  L+++ G  G L+L 
Sbjct: 306 RVPTVRSAAVWGLVLVAVVYLYSLLLEDSGITTLTLGMTFAIIALSLTVLTGYAGELNLA 365

Query: 70  CVIAYAIGAYSYVILGSRYG----LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
            +   A+        G              +      +   G ++ LP+L+ RG YLA+A
Sbjct: 366 PLSFGAVATIVAFHFGVSGSGLSAYLTPQGVLAGVAAAALVGGLIALPALRLRGLYLALA 425

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           T+       N++++            +    + L       +   +     +        
Sbjct: 426 TMAFGVFLSNMVLR------DTTEHELFGVKFTLFPNGTLAVPPPKLGPLDLRDGQTFLM 479

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
               +  L    +  LR +        ++D+  A   L   ++  KLS F +S+   G+ 
Sbjct: 480 TATVLFALLGVALAALRNSGYGRRLAAMKDSPAATAMLGQDLVRLKLSVFMISAGIAGLG 539

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG-MNFY 304
           G   +A+   +S + F    ++ ++ +V++ G+  +S       +      +  G  N  
Sbjct: 540 GVLMSAAAGSVSGENFTIMGSLALLMLVVVAGIGYISGALLGGLMSGVGATVLVGTFNDL 599

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLV 331
                        + H  ++  AL  +
Sbjct: 600 ALEHEAMSSIYSALAHLVMVGTALVGM 626



 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 72/283 (25%), Gaps = 8/283 (2%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y     +   +Y + A GL +   + G+ +        +G + +  L   +G      +
Sbjct: 6   TYTLLGLVLGAVYFIAASGLVLTYNTSGIFNFAHGAQAMLGTFLFWQLKYDWGWPTLAAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V   + G        P L      L +  L  +     I++    +             
Sbjct: 66  LVVIGLVG--------PLLGAALHALIMRGLRDTADVTKIIVTVAVLLGMVYLSQWIWNP 117

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
               T         +     V+        L+    ++  + +   R+ I    R   D+
Sbjct: 118 DEARTVEMFFGADAKVTVLGVVVRYHEIVCLVAAAAIAIGLRVLFTRSRIGVVMRGSVDD 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                        A + ++A+ S     AG                    I   +  + G
Sbjct: 178 PDLLRLNGHDPERAAMLSWALGSTLAVTAGVLIVPVGGGALEANMLTLLVIDAFAAAMFG 237

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            + S+ +      +L        G              S  M 
Sbjct: 238 RLRSIPRTFAGAMVLGLAATYVMGYLPASGPVTGNLRVSLPMI 280


>gi|170699137|ref|ZP_02890191.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
 gi|170135932|gb|EDT04206.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
          Length = 291

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 93/304 (30%), Gaps = 29/304 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI-LGSRYGLSIWLLIP 97
           I ++   + + ++ A GL+IV G + +++L       IGAY+  I        + W  + 
Sbjct: 4   ILNVLSSVCLLMLIALGLAIVFGMMDIVNLAHAEWVTIGAYTLAILQAVGGPQAFWFALF 63

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            +  +    G  +    ++   +      L    +   +    + +              
Sbjct: 64  AAPAVGAVLGWCLERLVIRLLYERPLDTLLATYAVSLIVQKALELVFG------------ 111

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                +               Y ++  +V+     ++A  +L    T      R +  + 
Sbjct: 112 -TQPMLVYAPINGALAVPGGSYPMYRLFVIGVAFTVTAGCLLIFACTRFGTQLRAVIQHP 170

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               ++          AF   +A   +AG   A      S      +       +++LGG
Sbjct: 171 AMAEAVGIDTRRLNRMAFCGGAALASLAGVLVAPMVSVESH--LGVAYLAKAFFVIVLGG 228

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+      +A +  +  L          S              L+++   ++I  R  
Sbjct: 229 IGSILGSLLGSAFVGTLETLLSYRVDPSLASA-------------LVLVLSIVLIRFRPQ 275

Query: 338 SLLR 341
            L+ 
Sbjct: 276 GLVP 279


>gi|311277620|ref|YP_003939851.1| inner-membrane translocator [Enterobacter cloacae SCF1]
 gi|308746815|gb|ADO46567.1| inner-membrane translocator [Enterobacter cloacae SCF1]
          Length = 308

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +       +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFIGAIVIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            S           + +       ++ L++R + +  A 
Sbjct: 129 ----RDIALPSLFNGQWVVGSSDSFSASITTMQLVIWVVTFIAMLALTLFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        +L     L        +  ++ F               L +
Sbjct: 244 TAAVLGGIGSIPGAMIGGLVLGIAEALSSAYLSTEYKDVVAF-------------ALLIV 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|259910107|ref|YP_002650463.1| branched-chain amino acid transporter permease subunit LivH
           [Erwinia pyrifoliae Ep1/96]
 gi|224965729|emb|CAX57261.1| High-affinity branched-chain amino acid transport system permease
           protein [Erwinia pyrifoliae Ep1/96]
 gi|283480203|emb|CAY76119.1| branched-chain amino acid ABC transport system,inner membrane
           component [Erwinia pyrifoliae DSM 12163]
          Length = 308

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 96/312 (30%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDTSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                  V+ +I+   G  +   + K       +  LI +      L  +  +T G    
Sbjct: 72  LIGCGFVVAVVIASCYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L + V                      +         ++ +++R + +  A 
Sbjct: 129 ----RDLALPSLVAGQWTLGVSNGFAATISTMQLVIWGVTFLAMLALTVFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFLAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L +
Sbjct: 244 TAAVLGGIGSIPGAMLGGLILGIAEALTSAYLSTEYKDVVSF-------------ALLIV 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|330886854|gb|EGH20289.1| high-affinity branched-chain amino acid ABC transporter permease
           BraD [Pseudomonas syringae pv. mori str. 301020]
          Length = 304

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 81/304 (26%), Gaps = 14/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P 
Sbjct: 9   MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGLESFPF 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+      F   S FV       ++L+   F    +   ++ T +    R  + ++K
Sbjct: 129 GVPTLLEGAWRFEIGSGFVQITYTKIFILIAAFFGMGVLTYIIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F + +A   +AG     +          F   I   +  +LGG 
Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGIKAFTAAVLGG- 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                       +  +     G                +          L L+++ R   
Sbjct: 247 ------------IGSLPGGMLGGLILGVAESQFSGLINSDYKDVFSFGLLVLILIFRPQG 294

Query: 339 LLRL 342
           LL  
Sbjct: 295 LLGR 298


>gi|254691558|ref|ZP_05154812.1| Bacterial inner-membrane translocator [Brucella abortus bv. 6 str.
           870]
 gi|254695145|ref|ZP_05156973.1| Bacterial inner-membrane translocator [Brucella abortus bv. 3 str.
           Tulya]
 gi|256256744|ref|ZP_05462280.1| Bacterial inner-membrane translocator [Brucella abortus bv. 9 str.
           C68]
 gi|260757184|ref|ZP_05869532.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260882992|ref|ZP_05894606.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261215501|ref|ZP_05929782.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|297250100|ref|ZP_06933801.1| branched-chain amino acid transport system permease [Brucella
           abortus bv. 5 str. B3196]
 gi|260677292|gb|EEX64113.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260872520|gb|EEX79589.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260917108|gb|EEX83969.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|297173969|gb|EFH33333.1| branched-chain amino acid transport system permease [Brucella
           abortus bv. 5 str. B3196]
          Length = 315

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 107/324 (33%), Gaps = 38/324 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             +     +        +   +  +    LI    A   +I+ G  G  S    + Y +G
Sbjct: 6   ALLAIIAAVLALGAPLFASPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGLG 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   I   ++ L  +    +  + +    M++GLP L+ +G Y AIATL + ++   I 
Sbjct: 66  AYGAGIAMVQFNLPFFAGAAIGIVAAVVFAMLIGLPILRLKGHYFAIATLALPQVMAAIT 125

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                                    V             +  + F Y   L +  ++  +
Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L R+        IR+N++   +++      K+ A  +S AF  MAGA  A     + 
Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMDINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222

Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P+       N+ +I + + GG  ++         L  V                    ++
Sbjct: 223 PEAAYQVQLNVQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLST--------------AY 268

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
                    I + + +++    L 
Sbjct: 269 TDVAGMFFGIVIVVAVVLMPRGLA 292


>gi|159037418|ref|YP_001536671.1| inner-membrane translocator [Salinispora arenicola CNS-205]
 gi|157916253|gb|ABV97680.1| inner-membrane translocator [Salinispora arenicola CNS-205]
          Length = 293

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 98/311 (31%), Gaps = 23/311 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +   +  +    Y + A GL+++ G L +++      Y +GA+   +L +  G+  W  +
Sbjct: 6   QNTFNGLVSGAFYALLALGLAVIFGMLRVVNFAHGAFYMLGAFGAYVLLTEAGVPFWAAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V  +     GM +    +        +   +++     I+     +  G          
Sbjct: 66  VVVPLALAGLGMALERAFIHRLTRLDPLYNFLLTFGLTLIVQDLVKLRYGVQSSPYEAP- 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                 +  +  ++L     +  ++   L RT +    R   + 
Sbjct: 125 ---------SALRGSVDFGIFEFPTYRVFILGFAVAVCVAVWWALARTRVGMVVRASTER 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +   +L   +       F       G+AG   A    R    +      I+V ++V++G
Sbjct: 176 PELTRALGINVGRWITPVFGFGIGLAGLAGVLAAP--MRAVNPLMGADLIIVVFAVVVIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+     A   +  V                    +F +   T++ I +  V+L R 
Sbjct: 234 GLGSIFGSVAAGFGIGMVQAWAEAYL-----------SAFPIVSQTIVFIVMAAVLLWRP 282

Query: 337 HSLLRLRTPSN 347
             L      S 
Sbjct: 283 AGLFGRAEASA 293


>gi|121610757|ref|YP_998564.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121555397|gb|ABM59546.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 287

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 55/306 (17%), Positives = 106/306 (34%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A GL+++ G LG+           G Y    L  R G++I L +  
Sbjct: 9   ILNGLVVGSVYTLIALGLTVIFGILGIAHFAHGSVAMFGGYLTHALMQRMGVNILLAMVP 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    GM++   + +       I   I++     ++ K   +  G   + +      
Sbjct: 69  AMLVGALLGMLIERLAYRPVRAGPPINAFIVALGLTMVIEKLNLLLFGVDQVVLPTPF-- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                     YV +    L  ++ L++ RT +  + R +  N+ 
Sbjct: 127 ----------GRTLEWGEWAMPELRIYVFVIAVLLVLALTLFMHRTWMGASIRAVAQNRS 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+SSA    AG    A               I   +++ILGG+
Sbjct: 177 AAVLMGVNVNRVSSIVFALSSALGVAAGVLIGALFAIAPGVSGGLV--IKGFAVLILGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL     L  G     +  ++ F             + +  V+L+R   
Sbjct: 235 GSIPGAIVGGLILGVSEALAAGFVSSAYKDVISF-------------VIMIAVLLLRPEG 281

Query: 339 LLRLRT 344
           L+R +T
Sbjct: 282 LMRRKT 287


>gi|329924208|ref|ZP_08279395.1| urea ABC transporter, permease protein UrtB [Paenibacillus sp.
           HGF5]
 gi|328940818|gb|EGG37131.1| urea ABC transporter, permease protein UrtB [Paenibacillus sp.
           HGF5]
          Length = 301

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 88/290 (30%), Gaps = 16/290 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           +  G + ++++       IGAYS  +    +   +      +  I+      M   ++ +
Sbjct: 27  VTFGLMNVINMAHGELIMIGAYSTYVTQGLFSAYMPKSWFDTYFIAALLVSFMVAAAVGW 86

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
             + + I  L       ++L  W      +           +  T  S +      +S +
Sbjct: 87  LLEMVLIRHL-YGRPLDSLLATWGVGMMLQQIARFIFGAPNVAVTSPSWLNGGLAITSSI 145

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I      +++L +  +  ++ L++ RT      R +  N+     L  +        FA+
Sbjct: 146 ILPYKRLFIVLLVAVVLTAMYLYIYRTVQGRRMRAVMQNRSMAGCLGISTRRVDGLTFAI 205

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG                    +    +V+LGG+  L         +     L
Sbjct: 206 GSGIAGIAGCALTLLGPI--GPSIGTYYIVDAFMVVVLGGVGKLVGTVAGALGIGVFNTL 263

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                                    L+   +   +  +   L+ LRT S 
Sbjct: 264 FETYTSASIGK-------------VLVFACIVAFLQWKPRGLVALRTRSL 300


>gi|329114866|ref|ZP_08243622.1| Urea ABC Transporter Permease Protein UrtC [Acetobacter pomorum
           DM001]
 gi|326695763|gb|EGE47448.1| Urea ABC Transporter Permease Protein UrtC [Acetobacter pomorum
           DM001]
          Length = 371

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/350 (13%), Positives = 95/350 (27%), Gaps = 36/350 (10%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L +     + L +       +  ++  + L Y     GL    G  G+LSL   I + +
Sbjct: 10  ILFLSILSAILLIVLPLGLDAFRLNLVGKYLTYAFVTIGLVACWGDSGILSLGQGIFFGL 69

Query: 77  GAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           G Y   +                       +                  S          
Sbjct: 70  GGYCMAMFLKLQASTLEATKSQSTPGIPDFMDWNQITALPWFWKPFHSLSFSLVAIIAVP 129

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPS 174
             L M         +            +A  L  L    +                 +  
Sbjct: 130 VLLAMVIGAAMFKRRVGGTYFAIITQAIASVLTILIIGQQGYTGGVNGITDLRTLDGWDI 189

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                ++ +YY  + +      ++ ++R++ +    R +RD +         +   K+  
Sbjct: 190 RTDHAKLVLYYAGVFLLLACLLLVRFVRQSKLGRILRAMRDQEDRVRFSGYNVANFKIFI 249

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           FA+++A  G+ GA F      +SP       +I ++    +GG  SL      T ++   
Sbjct: 250 FALAAAMAGVGGALFTLEVGFMSPTFVGIVPSIEMVIYCAVGGRNSLVGAVYGTLLVNWA 309

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                            F  S     T  M      +++     L  L  
Sbjct: 310 RT--------------SFSESLPELWTFAMGGLFIGIVVFLPGGLASLYE 345


>gi|206562127|ref|YP_002232890.1| putative amino acid transporter [Burkholderia cenocepacia J2315]
 gi|198038167|emb|CAR54118.1| putative amino acid transporter [Burkholderia cenocepacia J2315]
          Length = 262

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 86/261 (32%), Gaps = 14/261 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I ++   + +  + A GL+IV G + +++L       +GAY+  +  S  G   +    +
Sbjct: 4   ILNILSYVSVLTLVALGLAIVFGLMDIVNLAHAEWVTMGAYTLAVAQSVGGQHAFWAALL 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A I GA         +        + TL+ +     I+ K   +  G     V      
Sbjct: 64  AAPIVGAGLGWCLERFVIRLLYARPLDTLLATYAVSLIVQKAIELVFGTQPTLVYAPFN- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                               Y  +  +V+     ++A   +   RT      R +  +  
Sbjct: 123 -----------ATVEVPGGSYPAYRMFVIGVALAVTAGCWVLFTRTRFGTKLRAVIQHPA 171

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              ++          AF   +A   +AG   A      S      S       +++LGG+
Sbjct: 172 MAEAVGINTRRLNRVAFCGGAALASLAGVLVAPMVSVESH--LGMSYLAKAFFVIVLGGI 229

Query: 279 TSLSKIAKATAILIGVVELCC 299
            S++     +A +  +  L  
Sbjct: 230 GSVAGSILGSAFVGTIETLLA 250


>gi|310659507|ref|YP_003937228.1| leucine/isoleucine/valine ABC transporter membrane protein
           [Clostridium sticklandii DSM 519]
 gi|308826285|emb|CBH22323.1| leucine/isoleucine/valine transporter subunit ; membrane component
           of ABC superfamily [Clostridium sticklandii]
          Length = 292

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 86/305 (28%), Gaps = 29/305 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G S+V   +   +        IG+Y      S    S  +    
Sbjct: 8   MINGLSIGSVYALMAVGYSLVYSIMNFSNFAHGGVIMIGSYIGFFCISLLNFSFPVAFLT 67

Query: 99  SAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           +A+ SG   +++   +     + +   +  +I +      L      T G          
Sbjct: 68  AALGSGLLAVVLEKVAYNPLRKRNAPFLYFIISAMGASIFLENIVVATIGPTFRTYPPVF 127

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                               +        + +      + ++  + +T I  A R    +
Sbjct: 128 SATPIQ-----------IGGLTIGRLDVLMFVISAISLSILVYIIEKTKIGLAIRATSYS 176

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            K    +   +     + F +     G+AG  F       +      +  +      + G
Sbjct: 177 SKGSTLMGVNVDKVIFTIFLLGGILAGIAGVLFGMKY---TVYPQIGAITMKSFIAAVFG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ SL      + +L  +  L  G                +     +    L  V+++R 
Sbjct: 234 GLGSLQGAVIGSILLGIIETLTSGYIS-------------SQYRDLIAFALLIAVLIIRP 280

Query: 337 HSLLR 341
             ++ 
Sbjct: 281 TGIMG 285


>gi|238922891|ref|YP_002936404.1| galactoside ABC transporter, permease protein, putative
           [Eubacterium rectale ATCC 33656]
 gi|238874563|gb|ACR74270.1| galactoside ABC transporter, permease protein, putative
           [Eubacterium rectale ATCC 33656]
          Length = 549

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/297 (9%), Positives = 77/297 (25%), Gaps = 9/297 (3%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
              +   I ++  Q    +  A G++ ++   G   L+      +G  +  I+  +   +
Sbjct: 247 PLLTYNNILNILQQASPRMFLALGVAGLILLTG-TDLSVGRMVGMGMTTATIIMHQGINT 305

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
               +               +         L      ++  F         I+     + 
Sbjct: 306 G--SVFGHIFDFTGVPTGARVVIALLACIVLCTFFTSIAGFFTAKFKMHPFISTMANMLV 363

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           +   + +    V         P+  +        ++L      A +     +T       
Sbjct: 364 IFGIVTYATKGVSFGAIEPVIPNMIIPKLNGFPTIILWAVAAIAIVWFIWNKTTFGKNLY 423

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +  N +A      ++    L AF ++    G       A         +    ++  I+
Sbjct: 424 AVGGNPEAAAVSGISVFAVTLGAFVMAGILYGFGSWLECARMVGSGSAAYGQGWDMDAIA 483

Query: 272 IVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
             ++      GG+  +S +     I   +      +        +       +  T 
Sbjct: 484 ACVVGGVSFTGGIGKISGVVTGVCIFTALTYSLTILGIDTNLQFVFSGIIILVAVTL 540


>gi|238761715|ref|ZP_04622690.1| Inner-membrane translocator [Yersinia kristensenii ATCC 33638]
 gi|238700229|gb|EEP92971.1| Inner-membrane translocator [Yersinia kristensenii ATCC 33638]
          Length = 325

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 95/317 (29%), Gaps = 17/317 (5%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
                      +       L++   A GL+ + G  G+LS      + +  Y+Y ++   
Sbjct: 3   ALALPLVVDSAMIGDFSYFLLWTFCAIGLAAMWGHGGILSFGQTAFFGLAGYTYGVMTLN 62

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
           +G  +        M       +            +    + +  +   ++++        
Sbjct: 63  FGDGVLSTWSGLIMALLVAAAVAAALGYLMFYGGVTGIFIGIVTLSFTLVLETFMSQTAG 122

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI---FMYYVLLGMCFLSASIILWLRRT 204
               +          +  +           +  +     YY+++ +       +  + R+
Sbjct: 123 PQWAIGSARLNGFNGMSGMPPLSLPWFDGKLLTLEGNAFYYLIILLLAGVYWGVRRVLRS 182

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                  +IR+N +    L   I   +L  F +     G++GA +      I+P     +
Sbjct: 183 DFGLTLASIRENPRRAEMLGIDIRRYQLLVFVLGGVLSGLSGALYTLWGSYITPSSMGLT 242

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
              + +  V   G  ++   A  TA+L+ + +                    +     L+
Sbjct: 243 AAAMPVIWVATAGRKNIFGTAVITALLVWLSQWLAIYG--------------SEYAMILL 288

Query: 325 VIALFLVILMRSHSLLR 341
              L  V+L   + LL 
Sbjct: 289 GAILLFVVLAAPNGLLP 305


>gi|62318009|ref|YP_223862.1| inner-membrane translocator [Brucella abortus bv. 1 str. 9-941]
 gi|83269985|ref|YP_419276.1| inner-membrane translocator [Brucella melitensis biovar Abortus
           2308]
 gi|189023261|ref|YP_001933002.1| Bacterial inner-membrane translocator [Brucella abortus S19]
 gi|237817555|ref|ZP_04596545.1| inner-membrane translocator [Brucella abortus str. 2308 A]
 gi|254698246|ref|ZP_05160074.1| Bacterial inner-membrane translocator [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254731689|ref|ZP_05190267.1| Bacterial inner-membrane translocator [Brucella abortus bv. 4 str.
           292]
 gi|260544195|ref|ZP_05820016.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038]
 gi|260759447|ref|ZP_05871795.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260762691|ref|ZP_05875023.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|62198202|gb|AAX76501.1| hypothetical LivM [Brucella abortus bv. 1 str. 9-941]
 gi|82940259|emb|CAJ13322.1| Bacterial inner-membrane translocator [Brucella melitensis biovar
           Abortus 2308]
 gi|189021835|gb|ACD74556.1| Bacterial inner-membrane translocator [Brucella abortus S19]
 gi|237787310|gb|EEP61528.1| inner-membrane translocator [Brucella abortus str. 2308 A]
 gi|260097466|gb|EEW81340.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038]
 gi|260669765|gb|EEX56705.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260673112|gb|EEX59933.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 315

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 107/324 (33%), Gaps = 38/324 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             +     +        +   +  +    LI    A   +I+ G  G  S    + Y +G
Sbjct: 6   ALLAIIAAVLALGAPLFASPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGLG 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   I   ++ L  +    +  + +    M++GLP L+ +G Y AIATL + ++   I 
Sbjct: 66  AYGAGIAMVQFNLPFFAGAAIGIVAAVVFAMLIGLPILRLKGHYFAIATLALPQVMAAIT 125

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                                    V             +  + F Y   L +  ++  +
Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L R+        IR+N++   +++      K+ A  +S AF  MAGA  A     + 
Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMDINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222

Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P+       N+ +I + + GG  ++         L  V                    ++
Sbjct: 223 PEAAYQVQLNLQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLST--------------AY 268

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
                    I + + +++    L 
Sbjct: 269 TDVAGMFFGIVIVVAVVLMPRGLA 292


>gi|257094128|ref|YP_003167769.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257046652|gb|ACV35840.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 304

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y + A+  V + +         +P+
Sbjct: 8   LINGLTLGAVYGLIAIGYTMVYGIIGMINFAHGDIYMVSAFIAVTVFTLLASFGISSVPL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
           S ++     +                     + +   I  I           +    R+ 
Sbjct: 68  SLLVVLLVAVFFTSIYGWTVERTAYRPLRGSTRLAPLISAIGMSIFLQNMVQLTQGARVK 127

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   +   I         V        +++    L A     + +T+     R+   ++
Sbjct: 128 PVAPVLVGGIDILTIDGFTVRLAYSQVLIVVVTVALMAGFTWLITKTSFGRQQRSCEQDR 187

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                L   +       F + +A   +AG         +      F   I   +  +LGG
Sbjct: 188 TMTALLGINVDRTISLTFMLGAALAAVAGVMVTVYYGVVDFF-IGFVAGIKAFTAAVLGG 246

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + SL        ++  +           +  +  F               L LV++ R  
Sbjct: 247 IGSLPGAMLGGLLIGLIEAFWAAYLSAEYKDVATFT-------------ILILVLMFRPS 293

Query: 338 SLLRL 342
            LL  
Sbjct: 294 GLLGR 298


>gi|254460948|ref|ZP_05074364.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2083]
 gi|206677537|gb|EDZ42024.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 337

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/338 (10%), Positives = 88/338 (26%), Gaps = 19/338 (5%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           ++ FL      S   I           + A G++++ G L   +       A GA   + 
Sbjct: 1   MIDFLNAIVALSNFVIVPAIAYGSQLALGALGVTLIYGILRFSNFAHGDTMASGAMFTIF 60

Query: 84  LGSRYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           +      +           L +P   +      +       +F     A   +++     
Sbjct: 61  VTWWMQSAGINLGPLPTALLALPFGILGCMILVLFTDRFVYRFYRAQKAKPVILVIVSMG 120

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + I    +                        +        +  +      ++    + 
Sbjct: 121 VMFIMNGLVRFAIGPGEQRFSDGERFIINAREFKELTGLREGLAIKTSQGITVITAVIVV 180

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A +  +L RT    + R   DN+              +  + + +A    AG  +   + 
Sbjct: 181 ALLFWFLNRTRTGKSMRAYSDNEDLALLSGINPERVVMYTWLLVAALATTAGVLYGLDKS 240

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV--------ELCCGMNFYYF 306
                   F   + + +  I+GG+ +         ++            ++   +     
Sbjct: 241 F--KPFTYFQLLLPIFASAIVGGLGNPIGAIAGGFVIAFSEITITYAWKKVLIYLMPEQL 298

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                           +  + L +V+L +   L   +T
Sbjct: 299 EPSGLVQLLSTDYKFAVSFVILLIVLLFKPTGLFSGKT 336


>gi|222082649|ref|YP_002542014.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727328|gb|ACM30417.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 365

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 93/307 (30%), Gaps = 6/307 (1%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            ++        +Y + A G ++V G L +++        IG+++ +        +     
Sbjct: 59  SFVVFGLTIGSVYALIALGYTMVYGILRMINFAHGDVMMIGSFAGLFAALALADAGLTSA 118

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                +     + MG  +              +       LI    ++            
Sbjct: 119 APLLALPIVLAVAMGTGAAVSMTIERIAYRPFLHVRSLAPLICAIGLSFVLQYGARGLFG 178

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             + ++  I      +      A +   +R T +  A R + ++
Sbjct: 179 TRNRAYPSFGWMEGTVNLAGLVIPIPQIVAFVFAAIALAGLAAVVRLTPLGKAMRAVSED 238

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +    +  FA+  A  G+AG  +A    +I+     FS  I   +  ILG
Sbjct: 239 RDAAALVGIDVSRTIVFTFAIGGAMAGVAGVLYALVFKQITVF-IGFSLGIKGFAAAILG 297

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +L        +L     L   +    +     +          +    L L+++ R 
Sbjct: 298 GIGNLGGAMLGGLVLGLAEALGPALLLEGYGLPAPY-----QLKDVIGYGMLVLILIFRP 352

Query: 337 HSLLRLR 343
             LL  R
Sbjct: 353 QGLLGER 359


>gi|239813384|ref|YP_002942294.1| ABC transporter permease [Variovorax paradoxus S110]
 gi|239799961|gb|ACS17028.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 306

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 99/308 (32%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL++V G + +L+L     +  GAY      +R           
Sbjct: 10  LLNGLGYGLMLFLLAAGLTLVFGIMDVLNLAHGSLFMSGAYVAAEAHTRT---------- 59

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            +  +     +     +    + L +  L   +    +L  +  I      + +A     
Sbjct: 60  GSFTAAIVIAVAVTVVVALLLEVLLMRRLYTRDHLAQVLATFGVILVADDIVKMAWGPSP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +     + +         + Y  +   +L G   ++ ++ L +  T I    R    ++ 
Sbjct: 120 VMAPTPAALSGPIDLVDGLPYPSYRLVILAGGLLVALALYLLVNHTRIGMRVRAGASDRP 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + +A   +AGA                +  I  + ++++GG+
Sbjct: 180 MAELMGVRVGRIFNGVFLLGAALAALAGALMGPIVAV--QVGMGEAILIPALVVLVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335
            S+     A  ++  V  +          + L    +     +     M   + +V++ R
Sbjct: 238 GSVRGAFVAALMVGVVDTVGRAFVPMLLRATLPPATAADLGPLFAEVAMYALMVVVLIFR 297

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 298 PSGLFSAR 305


>gi|220905377|ref|YP_002480689.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869676|gb|ACL50011.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 304

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 99/305 (32%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G L L++      + +GAY    + +    +  + +P 
Sbjct: 8   MLNALQWGSFYALIALGYTLVYGVLRLINFAHGDIFMVGAYIAFFVSTWLISTDGMGLPQ 67

Query: 99  SAMISGACGMIMGLPSLK-FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            A++     + M L +      + +A   L      +  ++    +            L 
Sbjct: 68  QAVLWLTIPLTMILTAFVGVTIERVAYRPLRRKGAHRLYVVITALMCGLILENGNLALLG 127

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                +  L+    +    ++      +V++    +   +   + RT +  A R +  ++
Sbjct: 128 ATKRKLPELVDKTVYSFGPLVVTNLKLWVIVAAILVFLVLQTIVTRTKVGMAMRAVSWDR 187

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A   +   +    +  F + S   G+ G  FA     + P M         I+ V+ GG
Sbjct: 188 FALPLMGIPLDSVIVVTFILGSGIAGLGGMLFAMCYPTLEPYMGAMIGWKAFIAAVV-GG 246

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           +  +        +L  V  +        +  L  F               L L++ MR  
Sbjct: 247 IGDIRGAFVGGFLLAFVEIMVVAFLPSTYMDLFSFT-------------ILLLILWMRPT 293

Query: 338 SLLRL 342
            +   
Sbjct: 294 GIFGT 298


>gi|254463056|ref|ZP_05076472.1| inner-membrane translocator [Rhodobacterales bacterium HTCC2083]
 gi|206679645|gb|EDZ44132.1| inner-membrane translocator [Rhodobacteraceae bacterium HTCC2083]
          Length = 310

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 58/326 (17%), Positives = 114/326 (34%), Gaps = 37/326 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L     L+         +  Y   +G+ +++Y   A    +  G    +SL     + IG
Sbjct: 9   LIWAAVLVGLAAFWPMVTNGYWLGIGVDVMMYTALATSWMLFSGPTHYISLASAAFFGIG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            +      S Y  S W ++ +SA+I  A   ++GL +L+  G Y  I TL ++E+ +N++
Sbjct: 69  GFVVGSGMSDYDASFWSMLALSALIGAALAALIGLATLRLSGVYFVIFTLGLAEMIRNLV 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
              +    G  G+YV                              +Y++LL        +
Sbjct: 129 SWVQNNFLGSRGLYVLTDFTDTH----------------------LYWMLLVTAASVYLL 166

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              + R+ +  A R I  ++     +       K+  F  +  F  + GA  A     I 
Sbjct: 167 GWIISRSRLGFALRIIGGDETVARHVGINTATTKVILFTTTGFFAAIVGAIIAPRWSYIE 226

Query: 258 PDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P+  F    +  V+ + +LGG   L          + +                  D +F
Sbjct: 227 PNQVFSPHLSFFVVIMALLGGSGRLWGPVAGVIPFLLIWNWV--------------DSNF 272

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
             +   ++  A  +++    H ++  
Sbjct: 273 PNQSILVLGFAFLIIVYFLPHGVVGR 298


>gi|149915145|ref|ZP_01903673.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter sp. AzwK-3b]
 gi|149810866|gb|EDM70705.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter sp. AzwK-3b]
          Length = 373

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/347 (12%), Positives = 93/347 (26%), Gaps = 36/347 (10%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L+      L+           +  ++  + L Y   A GL +  G+ G+LSL   + + +
Sbjct: 11  LIGFAILALIIFIALPMALDSFRLNLFGKYLTYAFVAVGLVLCWGAGGILSLGQGVFFGL 70

Query: 77  GAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           G Y   +                       +                  +          
Sbjct: 71  GGYCMAMFLKLEASTPENTSIQSTPGIPDFMDWNQLTELPIWWQPFHSLAFSLFAVVAVP 130

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI----------RFFRFPS 174
                         +   +         A  L  L    +                 +  
Sbjct: 131 VFFAFIIGVAMFKRRVGGVYFAIITQAFAAILTILIIGQQGYTGGVNGITDLRTLLGWDI 190

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
                +  +YYV   + F+   I  ++R++ +      +RD +         +   K+  
Sbjct: 191 RTDEAKEVLYYVNGALLFVVLFIAQFVRKSKLGRLLIAMRDQEDRVRFSGYDVAGFKIFI 250

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F + +AF G+ GA F      +SP +     +I ++    +GG  S+        ++   
Sbjct: 251 FCLGAAFAGIGGAMFTLQVGFMSPTLVGIVPSIEMVIFCAVGGRLSILGAVYGALLVNWA 310

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                            F  SF       +      V+++  + L  
Sbjct: 311 KT--------------SFSESFPELWLLGLGGLFIAVVMLFPNGLAG 343


>gi|146341741|ref|YP_001206789.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. ORS278]
 gi|146194547|emb|CAL78572.1| Putative branched-chain amino acid ABC transporter (permease
           protein) [Bradyrhizobium sp. ORS278]
          Length = 356

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 51/328 (15%), Positives = 111/328 (33%), Gaps = 17/328 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
              A+   +L         S  Y     +   ++V  A  LS++ G  G LS      + 
Sbjct: 24  AFWALFALVLGGALAYPLFSDGYTVGNTVYFFVWVFIALSLSLIWGYGGSLSFGQTAFFG 83

Query: 76  IGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           I  Y Y IL   +       W+ + ++  ++     ++G      R   + +  + ++  
Sbjct: 84  IAGYGYGILTINFGASYGFTWIALLLAIGMAALVAALLGYFMFFGRIGGVFLGIVTLAVT 143

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
                   +               +   + +  L   +      +  ++ +YYV+LG+  
Sbjct: 144 LMLERFMAQTAGPEWRIGAARLNGFNGMSAMPPLTIPWFGGPIVLFADVGLYYVVLGILV 203

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L    +  L  ++  N    IR+N +    L   I   +L  F + +A  G++G  +   
Sbjct: 204 LVYLGLRILMNSSFGNVIVAIRENPERAEMLGYDIRKYQLITFVIGAALAGLSGVLYTVW 263

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              I+P     +   + +  V +GG + L+     T ++               +     
Sbjct: 264 GQYITPSSMGMTAASLPLIWVAVGGRSDLTATVIGTLVV--------------LSGFQAL 309

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLL 340
               +      M + L L +L+  + L+
Sbjct: 310 TIYGSQYALVFMGVLLVLTVLIAPNGLV 337


>gi|187928539|ref|YP_001899026.1| inner-membrane translocator [Ralstonia pickettii 12J]
 gi|187725429|gb|ACD26594.1| inner-membrane translocator [Ralstonia pickettii 12J]
          Length = 330

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 113/321 (35%), Gaps = 27/321 (8%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
            + +     L+  M + GL+++   +G+L+      Y +GAY   ++        W  + 
Sbjct: 22  NLLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYVVSGYL--GFWTALI 79

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           V+ ++ GA G ++    L+    Y  +A L+ +     ++ +   +  G         L 
Sbjct: 80  VAPLLVGALGAVVERFGLRTVHRYGHVAELLFTFGLAYLIEEGVKLVWG---------LP 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   V   +    F      +  +  +++L    +   I L L RT I    +    + 
Sbjct: 131 AVPYRVPDALDGPLFTLFTSSFPKYRAFMMLVSLLMLVGIFLLLTRTRIGLVIQAALTHP 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +L   +    +  F    A  G+AG         ++      +   IV  + ++GG
Sbjct: 191 DMVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NAFVTEPSMAAAVGSIVFVVAVVGG 248

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL------- 330
           M SL     A+ ++  +      ++    + L K   + N     + V  L +       
Sbjct: 249 MGSLVGAFVASLLIGCIQTFAVTLDISVTSVLGKIGVTLNPDVPLISVWNLTIAQVAPVL 308

Query: 331 -------VILMRSHSLLRLRT 344
                  +++ R   L+  R 
Sbjct: 309 PYLLLVLMLIFRPRGLMGTRE 329


>gi|282849000|ref|ZP_06258389.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Veillonella parvula ATCC 17745]
 gi|282581275|gb|EFB86669.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Veillonella parvula ATCC 17745]
          Length = 293

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 100/308 (32%), Gaps = 27/308 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GL++V G L ++++     + IGA+  + + + + ++I++ + V
Sbjct: 6   LVNGLTLGSLYAVLAIGLTLVFGVLNIINMAHGGIFMIGAFVGLFMVTVFDVNIFVALIV 65

Query: 99  SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           +  +    G ++   +     +     +A LI +      L     +  G          
Sbjct: 66  AMAVGAILGYLLEFVALRPLRKKKVSHLAPLISTIGVSIFLESLALLLWGPQTRSFPPDY 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   +            +  + M  + + +           ++T I  A R +  +
Sbjct: 126 IGGLIDFGAFKISMVQIIGLGVSVVLMLILNIVI-----------KKTKIGKAIRAVSMS 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    L             ++SA    AG     S + I P M         ++++ILG
Sbjct: 175 TETAALLGINPTMIISVTVMIASALGSAAGVLVGLSFNAIEPTM-GVIIGFKGLAVLILG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +++       IL              F   + F               + L++  R 
Sbjct: 234 GLGNITGAMVGGFILGVAEIFSVAYGASTFRDAVAFG-------------LIILLLFWRP 280

Query: 337 HSLLRLRT 344
             L   + 
Sbjct: 281 QGLFGSKD 288


>gi|294084498|ref|YP_003551256.1| branched-chain amino acid ABC transporter permease [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664071|gb|ADE39172.1| branched-chain amino acid ABC transporter, permease protein
           [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 303

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 89/305 (29%), Gaps = 18/305 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +I       ++Y + A G+S++   L ++       Y  GA+  ++L +  GL   + +
Sbjct: 10  AFIIFGVTIGVVYGIVALGISLIYSGLDIVHFAHGEMYMFGAFFGLVLANNVGLPYPVAL 69

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + +++   GM +     +         T+    +          + N     Y     
Sbjct: 70  IGAMIMTACLGMFVERVFYRRLTSAGGGYTVAGMGMIICGFGMSVALVNVA---YFIWGA 126

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                            +  +          +    L A++  +LR T    A R +  N
Sbjct: 127 EAEPFRANLDYIPRLQFAGDIEVPESYVLTAIISVVLMAALHYFLRHTKTGLAVRAVAHN 186

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +   + +   +       F +S A    AG      +         +   +   +  ++G
Sbjct: 187 KDIAYLMGINVPLMISLIFGLSCALAAAAGVLIGPMQSV--QVEMGYLMLMKAFAAAVVG 244

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  SL        ++     L           +  F             + L LV++ R 
Sbjct: 245 GFGSLPGAILGGIMVGIFENLGAAYISPSHKDIYAF-------------LLLILVLMFRP 291

Query: 337 HSLLR 341
             L  
Sbjct: 292 SGLFG 296


>gi|148259376|ref|YP_001233503.1| inner-membrane translocator [Acidiphilium cryptum JF-5]
 gi|146401057|gb|ABQ29584.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidiphilium cryptum JF-5]
          Length = 300

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 93/305 (30%), Gaps = 17/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++        +GA+  +   +  G +      +
Sbjct: 8   VFNGLTVGGIYALIALGYTMVYGVMRLINFAHGDLCILGAFIGLTFLTSLGGAGHPGAAL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +   A  +++ +  +                      +    +      +  + ++  
Sbjct: 68  LILAFVAAIVVVAVAGVVLELAAYRPLRKADRLAAVVSALGASLLIENGIMLIWSPQVSV 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             + +     +     +          +++    L A++ L++  T    A R    +Q 
Sbjct: 128 FPSGLLPTTTYH---IAGASISFVQVMIIIVSFLLMAALYLFVNHTRFGTAIRAAAIDQD 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +     S F +  A   + G F       +   M  ++  +      ILGG+
Sbjct: 185 AARLMGINVNRVIASVFVIGPALGAVGGLFIGVYYREVYFTM-GWTYGLYAFIAAILGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L        G     +   + F               L  ++L+R   
Sbjct: 244 GNIPGAMLGGILLGLFNAFAAGYISSSWQDAITF-------------ALLIGILLVRPSG 290

Query: 339 LLRLR 343
           LL  R
Sbjct: 291 LLGER 295


>gi|327400707|ref|YP_004341546.1| ABC transporter integral membrane subunit [Archaeoglobus veneficus
           SNP6]
 gi|327316215|gb|AEA46831.1| ABC-type transporter, integral membrane subunit [Archaeoglobus
           veneficus SNP6]
          Length = 348

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 57/341 (16%), Positives = 119/341 (34%), Gaps = 52/341 (15%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + S+ I   +Y++ A  L++  G  G+ +    +A  +GA +   + +R  + ++     
Sbjct: 7   VISILIWFGLYLIIAISLNLEYGYGGIPNFGRALAALMGAIAVGAVVNRILILMFGITGS 66

Query: 94  ----------------------------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
                                         + +S ++    G +  LPS K   DYLAI 
Sbjct: 67  ITTASGIAKSTINEIIAQNPAVGIGLLLFTLLISGILGIVVGALFILPSAKLESDYLAIT 126

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            L +SE+   +      I  G  G+   + L F+    + L+                  
Sbjct: 127 LLAISEVAYMVCYYNTDIMGGYYGVPTPNVLAFIPGEWKDLVFMC--------------- 171

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++L +  +       L  T      R  R+N+    +    ++  ++   AV S    M+
Sbjct: 172 LILLVALVVYFFAERLLNTPYGRLLRATRENENVVRAFGKDVMKIRIKTVAVGSGIASMS 231

Query: 246 GAFFAASRDRISPDMFKFS---ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           GA ++     +S  +  FS          +V+LGG+ +   +A      + + +L     
Sbjct: 232 GALYSFYTGNVSGIVNLFSRVEWTFFPFLMVLLGGLGNNRGVAVGVLTFVTIRKLLEVY- 290

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            +            N     L  + + L++  R   L++ +
Sbjct: 291 KHEITRFFALPFDVNWLQYILFGVMMLLILYYRPDGLIKEK 331


>gi|291279876|ref|YP_003496711.1| branched-chain amino acid ABC transporter permease [Deferribacter
           desulfuricans SSM1]
 gi|290754578|dbj|BAI80955.1| branched-chain amino acid ABC transporter, permease [Deferribacter
           desulfuricans SSM1]
          Length = 294

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 103/306 (33%), Gaps = 23/306 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             I +  +   IY + A G +++  + G+++        IGAY  + L + + +      
Sbjct: 6   NLIITGLVVGSIYALLALGFTLIYKATGVVNFAQGELLLIGAYICLYLTTSFKIPFIPSF 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ +     G ++    L+       I+ ++++    ++L     I  G          
Sbjct: 66  VLTFVFMFFFGFLIEKVFLRKMIGEPIISIIMLTIGLSSVLKSIVQIFWGTDTRVFPQIF 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                ++  +     +  S +   I +               ++ +++    A R +  +
Sbjct: 126 STKPISLFGIKVSQVYIFSVISVIISL-----------GIFSVFFKKSKAGVAMRAVASD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           Q+A  S+   I      A+A+++    + G F        +         + V   VILG
Sbjct: 175 QQAALSMGIEIKKVFALAWAIAAVVSAIGGVFVGNINGVNTNLAQ---FGLKVFPAVILG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S++       ++  +  L  G                         I + +V++++ 
Sbjct: 232 GLDSITGAIVGGLVIGVLENLVGGYIDPIIGGG---------AKEVFPFIFMIIVLMIKP 282

Query: 337 HSLLRL 342
           + L   
Sbjct: 283 YGLFGT 288


>gi|167549222|ref|ZP_02342981.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205325635|gb|EDZ13474.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
          Length = 308

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   +     +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFIGAIIIASAYGWSIERVAYWPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWIVGSSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|269797727|ref|YP_003311627.1| inner-membrane translocator [Veillonella parvula DSM 2008]
 gi|269094356|gb|ACZ24347.1| inner-membrane translocator [Veillonella parvula DSM 2008]
          Length = 293

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 100/308 (32%), Gaps = 27/308 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GL++V G L ++++     + IGA+  + + + + ++I++ + V
Sbjct: 6   LVNGLTLGSLYAVLAIGLTLVFGVLNIINMAHGGIFMIGAFVGLFMVTIFNVNIFVALIV 65

Query: 99  SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           +  +    G ++   +     +     +A LI +      L     +  G          
Sbjct: 66  AMAVGAILGYLLEFVALRPLRKKKVSHLAPLISTIGVSIFLESLALLLWGPQTRSFPPDY 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   +            +  + M  + + +           ++T I  A R +  +
Sbjct: 126 IGGLIDFGAFKISMVQIIGLGVSVVLMLILNVVI-----------KKTKIGKAIRAVSMS 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    L             ++SA    AG     S + I P M         ++++ILG
Sbjct: 175 TETAALLGINPTMIISITVMIASALGAAAGVLVGLSFNAIEPTM-GVIIGFKGLAVLILG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +++       IL              F   + F               + L++  R 
Sbjct: 234 GLGNITGAMVGGFILGVAEIFSVAYGASTFRDAVAFG-------------LIILLLFWRP 280

Query: 337 HSLLRLRT 344
             L   + 
Sbjct: 281 QGLFGSKD 288


>gi|23500146|ref|NP_699586.1| branched-chain amino acid ABC transporter permease [Brucella suis
           1330]
 gi|161620465|ref|YP_001594351.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella canis ATCC 23365]
 gi|254699649|ref|ZP_05161477.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella suis bv. 5 str. 513]
 gi|254702788|ref|ZP_05164616.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella suis bv. 3 str. 686]
 gi|254706096|ref|ZP_05167924.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella pinnipedialis M163/99/10]
 gi|254711606|ref|ZP_05173417.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella pinnipedialis B2/94]
 gi|254712220|ref|ZP_05174031.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ceti M644/93/1]
 gi|254715291|ref|ZP_05177102.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ceti M13/05/1]
 gi|256015177|ref|YP_003105186.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella microti CCM 4915]
 gi|256029760|ref|ZP_05443374.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella pinnipedialis M292/94/1]
 gi|260167152|ref|ZP_05753963.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. F5/99]
 gi|260568303|ref|ZP_05838772.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40]
 gi|261217019|ref|ZP_05931300.1| branched-chain amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261313533|ref|ZP_05952730.1| branched-chain amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
 gi|261319229|ref|ZP_05958426.1| branched-chain amino acid ABC transporter [Brucella pinnipedialis
           B2/94]
 gi|261319889|ref|ZP_05959086.1| branched-chain amino acid ABC transporter [Brucella ceti M644/93/1]
 gi|261750113|ref|ZP_05993822.1| branched-chain amino acid ABC transporter [Brucella suis bv. 5 str.
           513]
 gi|261753387|ref|ZP_05997096.1| branched-chain amino acid ABC transporter [Brucella suis bv. 3 str.
           686]
 gi|261756554|ref|ZP_06000263.1| bacterial inner-membrane translocator [Brucella sp. F5/99]
 gi|265986771|ref|ZP_06099328.1| branched-chain amino acid ABC transporter [Brucella pinnipedialis
           M292/94/1]
 gi|23463743|gb|AAN33591.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella suis 1330]
 gi|161337276|gb|ABX63580.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella canis ATCC 23365]
 gi|255997837|gb|ACU49524.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella microti CCM 4915]
 gi|260154968|gb|EEW90049.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40]
 gi|260922108|gb|EEX88676.1| branched-chain amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261292579|gb|EEX96075.1| branched-chain amino acid ABC transporter [Brucella ceti M644/93/1]
 gi|261298452|gb|EEY01949.1| branched-chain amino acid ABC transporter [Brucella pinnipedialis
           B2/94]
 gi|261302559|gb|EEY06056.1| branched-chain amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
 gi|261736538|gb|EEY24534.1| bacterial inner-membrane translocator [Brucella sp. F5/99]
 gi|261739866|gb|EEY27792.1| branched-chain amino acid ABC transporter [Brucella suis bv. 5 str.
           513]
 gi|261743140|gb|EEY31066.1| branched-chain amino acid ABC transporter [Brucella suis bv. 3 str.
           686]
 gi|264658968|gb|EEZ29229.1| branched-chain amino acid ABC transporter [Brucella pinnipedialis
           M292/94/1]
          Length = 294

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/294 (11%), Positives = 91/294 (30%), Gaps = 27/294 (9%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107
           + + A GL+++ G + +++         G +   ++ ++ GL  +  + +    +     
Sbjct: 18  FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 77

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +   L            A +  +      +I    +  G                  +  
Sbjct: 78  LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 126

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                    +       ++ LG   L  ++ L+L+ +    A R +  ++ A   +   +
Sbjct: 127 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGRAIRAVAQHRSAAELMGVNV 186

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
               +  F + +A +G+A    A      S     F        +V+LGG+ S+      
Sbjct: 187 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 244

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             I+  +  +                   +     ++     L+++++   L  
Sbjct: 245 ALIIGVIDTMSGYYIG-------------SDLREAVVFGIFLLILILKPSGLFG 285


>gi|292489949|ref|YP_003532841.1| branched-chain amino acid ABC transporter inner membrane protein
           [Erwinia amylovora CFBP1430]
 gi|292900981|ref|YP_003540350.1| high-affinity branched-chain amino acid ABC transporter permease
           [Erwinia amylovora ATCC 49946]
 gi|291200829|emb|CBJ47963.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Erwinia amylovora ATCC 49946]
 gi|291555388|emb|CBA23792.1| branched-chain amino acid ABC transport system, inner membrane
           component [Erwinia amylovora CFBP1430]
          Length = 308

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 95/312 (30%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMLGIDTSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                  V+ +I+   G  +   + K       +  LI +      L  +  +T G    
Sbjct: 72  LIGCGFVVAVVIASCYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L   V                      +         ++ L++R + +  A 
Sbjct: 129 ----RDLALPGLVSGQWTLGVSNGFAATISTMQLMIWGVTFLAMLALTLFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPY-IGFLAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L +
Sbjct: 244 TAAVLGGIGSIPGAMLGGLILGIAEALTSAYLSTEYKDVVSF-------------ALLIV 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|146342355|ref|YP_001207403.1| putative branched-chain amino acid ABC transporter
           permease/livM-like protein [Bradyrhizobium sp. ORS278]
 gi|146195161|emb|CAL79186.1| putative branched-chain amino acid ABC transporter (permease
           protein); livM-like protein [Bradyrhizobium sp. ORS278]
          Length = 322

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 62/313 (19%), Positives = 121/313 (38%), Gaps = 29/313 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                   + ++ I ++I  + A G +I+ G  GL S      +  GAY+  +L +R+G+
Sbjct: 20  PFLGLSGALLNLMIFMMITALAAQGWNILGGYAGLSSFGHAAFFGAGAYAMAVLQTRFGV 79

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           + W+ + +   +    G  +G  S +   +G Y A+ TL  +E+ + IL      T G A
Sbjct: 80  NAWIALVIGIALGALVGAAIGFLSFRSGLKGSYFALITLAFAEVAR-ILANSTNFTGGAA 138

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           GI +  +                          +   + LG   +   +  WL  +    
Sbjct: 139 GILLKLQTGLPYLQFADRR--------------YFLLIALGFVAIGLLVSWWLEHSRFGA 184

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENI 267
               +R+N++A  +L   +   K+ A A+S A    AG  +A +   I  +  F    +I
Sbjct: 185 YLVALRENEQAAQALGVDVFAVKMKAIAISGALTAAAGCLYAQNYLFIDANVAFGSWISI 244

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +   I+GG  ++        +L+G+ EL  G++                    +  + 
Sbjct: 245 EALFAAIVGGSGTVLGPMLGAIVLLGLGELTKGLSG-----------GIPGMDLMVFGVI 293

Query: 328 LFLVILMRSHSLL 340
           L L +    + L+
Sbjct: 294 LVLSVAFSPNGLV 306


>gi|26250069|ref|NP_756109.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli CFT073]
 gi|170680877|ref|YP_001745705.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli SMS-3-5]
 gi|215488732|ref|YP_002331163.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli O127:H6 str. E2348/69]
 gi|218550719|ref|YP_002384510.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia fergusonii ATCC 35469]
 gi|218702202|ref|YP_002409831.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli IAI39]
 gi|218707051|ref|YP_002414570.1| branched-chain amino acid permease LivH [Escherichia coli UMN026]
 gi|293407038|ref|ZP_06650962.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli FVEC1412]
 gi|293412877|ref|ZP_06655545.1| conserved hypothetical protein [Escherichia coli B354]
 gi|298382784|ref|ZP_06992379.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli FVEC1302]
 gi|300898846|ref|ZP_07117149.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 198-1]
 gi|300936485|ref|ZP_07151405.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 21-1]
 gi|300985253|ref|ZP_07177350.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 45-1]
 gi|306816200|ref|ZP_07450338.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli NC101]
 gi|312968232|ref|ZP_07782442.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Escherichia coli 2362-75]
 gi|331649261|ref|ZP_08350347.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli M605]
 gi|331659752|ref|ZP_08360690.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli TA206]
 gi|331665065|ref|ZP_08365966.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli TA143]
 gi|331674941|ref|ZP_08375698.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli TA280]
 gi|26110498|gb|AAN82683.1|AE016768_101 High-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli CFT073]
 gi|170518595|gb|ACB16773.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli SMS-3-5]
 gi|215266804|emb|CAS11245.1| high-affinity branched-chain amino acid transport system; membrane
           component; membrane component of ABC superfamily
           [Escherichia coli O127:H6 str. E2348/69]
 gi|218358260|emb|CAQ90907.1| leucine/isoleucine/valine transporter subunit ; membrane component
           of ABC superfamily [Escherichia fergusonii ATCC 35469]
 gi|218372188|emb|CAR20050.1| leucine/isoleucine/valine transporter subunit ; membrane component
           of ABC superfamily [Escherichia coli IAI39]
 gi|218434148|emb|CAR15065.1| leucine/isoleucine/valine transporter subunit ; membrane component
           of ABC superfamily [Escherichia coli UMN026]
 gi|281180484|dbj|BAI56814.1| leucine ABC transporter ABC transporter permease component
           [Escherichia coli SE15]
 gi|284923447|emb|CBG36542.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Escherichia coli 042]
 gi|291425849|gb|EFE98883.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli FVEC1412]
 gi|291468524|gb|EFF11017.1| conserved hypothetical protein [Escherichia coli B354]
 gi|298276620|gb|EFI18138.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli FVEC1302]
 gi|300357467|gb|EFJ73337.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 198-1]
 gi|300408124|gb|EFJ91662.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 45-1]
 gi|300458407|gb|EFK21900.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 21-1]
 gi|305850596|gb|EFM51053.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli NC101]
 gi|312287057|gb|EFR14967.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Escherichia coli 2362-75]
 gi|315291691|gb|EFU51047.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 153-1]
 gi|315295975|gb|EFU55284.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 16-3]
 gi|323174094|gb|EFZ59722.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Escherichia coli LT-68]
 gi|323188953|gb|EFZ74237.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Escherichia coli RN587/1]
 gi|323966121|gb|EGB61558.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli M863]
 gi|323974902|gb|EGB70013.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli TW10509]
 gi|324111778|gb|EGC05758.1| branched-chain amino acid transport system/permease component
           protein [Escherichia fergusonii B253]
 gi|325499006|gb|EGC96865.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia fergusonii ECD227]
 gi|327251091|gb|EGE62784.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Escherichia coli STEC_7v]
 gi|330909495|gb|EGH38009.1| high-affinity branched-chain amino acid transport system permease
           protein LivH [Escherichia coli AA86]
 gi|331041759|gb|EGI13903.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli M605]
 gi|331052967|gb|EGI25000.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli TA206]
 gi|331057575|gb|EGI29561.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli TA143]
 gi|331067850|gb|EGI39248.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli TA280]
          Length = 308

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMLGIDTGWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|84499957|ref|ZP_00998223.1| ABC transporter permease protein [Oceanicola batsensis HTCC2597]
 gi|84391891|gb|EAQ04159.1| ABC transporter permease protein [Oceanicola batsensis HTCC2597]
          Length = 305

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 49/308 (15%), Positives = 105/308 (34%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + A GL++V G + +++L   + Y +GAY      +  G   W L+ +
Sbjct: 9   LLNGVQLGVLLFLIAAGLTLVFGIMDVINLAHGVLYMVGAYLIATFAALTGSFWWGLLLM 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                    +I  +   +          L        +L  +  +      + +      
Sbjct: 69  LPAAVVVGLLIEVVIIRR----------LYARSHLDQVLATFGLVMIASELVEIVWGTSP 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   +  ++         + Y ++   V+L    ++A + + +  T I    R    N+ 
Sbjct: 119 LSVPMPEMLSGSVPLMGPLRYPVYRIAVILAGLAVAAGLYVVVNHTRIGMLLRAGATNRM 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       F + +    +AGA  A             S  I+   +V++GG+
Sbjct: 179 MVSALGVDINKLFAIVFTLGAVLACLAGALVAPILSV--DTGMGESVLILAFVVVVIGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMR 335
            S+        ++  V  L      +   SLL    +  M       L+ I + +++  R
Sbjct: 237 GSIKGAFLGALLVAVVDTLGGVFGPFLLRSLLDPAAAGQMGRVLAPMLVYILMAVILFAR 296

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 297 PAGLFGRR 304


>gi|307945757|ref|ZP_07661093.1| monosaccharide-transporting ATPase [Roseibium sp. TrichSKD4]
 gi|307771630|gb|EFO30855.1| monosaccharide-transporting ATPase [Roseibium sp. TrichSKD4]
          Length = 360

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 91/313 (29%), Gaps = 18/313 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +   +   L      S   +  +  Q+ I  + A   S+V+ + G + L+     
Sbjct: 52  LIVLVLSIAIFGILLGSKFFSPFAMTLILQQVQIVGIVAAAQSLVILTAG-IDLSVGAIM 110

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +     +  RYGL   + +    +    CG I G      +     +   +   +  
Sbjct: 111 VLSSVVMGQVTFRYGLPAEIAVLCGLICGTICGYINGFLVAVVKLPPFIVTLGMWQIVLA 170

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +     T     I     L               F +   I      Y ++ M  L 
Sbjct: 171 TNFLYSANETIRSQDISANAPLLQF------------FGNKVNIGGAIFTYGVIFMVLLV 218

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   LR+TA       + D+ +A       +    +S + +S      AG        
Sbjct: 219 IVLAYALRQTAWGRHVYAVGDDPEAAQLSGVQVKKTLISVYMISGLICAFAGWAMIGRIG 278

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            ISP   + +    + ++VI      GG  S+        I+         +      + 
Sbjct: 279 SISPTTGQLANIESITAVVIGGISLFGGRGSILGSLFGALIVGVFTLGLRLLGADAQWTY 338

Query: 310 LKFDCSFNMRHTT 322
           L            
Sbjct: 339 LLIGLLIIAAVAV 351


>gi|90410176|ref|ZP_01218193.1| Putative ribose ABC transporter, permease protein [Photobacterium
           profundum 3TCK]
 gi|90329529|gb|EAS45786.1| Putative ribose ABC transporter, permease protein [Photobacterium
           profundum 3TCK]
          Length = 329

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/313 (9%), Positives = 84/313 (26%), Gaps = 25/313 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++  +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 31  LIALILLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 89

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      +I  +       +    +   + +                + F  
Sbjct: 90  LCGAFAATMIGLEIPAIIAVPTALLAGAALGAISGVIIAK------------GKVQAFIA 137

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T V     +F    +  I       V++       
Sbjct: 138 TLVTMTLLRGVTMVYTDGRPISTGFTDVADSFAWFGTGYAMGIPVPIWLMVIVFASIWYL 197

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 198 L-----NHTRFGRYIYALGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 252

Query: 256 ISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             P        +  I+ V+LGG         +        I+  +      ++   +  +
Sbjct: 253 AQPTA-GMGYELDAIAAVVLGGTSLAGGKGRIMGTLVGALIIGFLNNALNLLDVSSYYQM 311

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 312 IAKAVVILLAVLV 324


>gi|332654586|ref|ZP_08420329.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Ruminococcaceae bacterium D16]
 gi|332516550|gb|EGJ46156.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Ruminococcaceae bacterium D16]
          Length = 383

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 67/345 (19%), Positives = 139/345 (40%), Gaps = 42/345 (12%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG-AYSYVILGSR---------- 87
           +  +  +  +Y + A  +++V G  GL SL       +  AY+Y IL             
Sbjct: 38  LFVVLKKGAVYSLVAVSMNLVNGFTGLFSLGQAGFMLL-GAYTYAILTVPVSAKDTVYYL 96

Query: 88  ----------------------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
                                   L + L I +   ++     ++GLP L+ + DYLAIA
Sbjct: 97  FGGSAVKFSLPDLFGGVDTPAGLILGVLLAIILGGCVAAFFAYLIGLPVLRLKSDYLAIA 156

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL  +EI + I  +W+ +     G  +        T + +   F    SS  +      +
Sbjct: 157 TLGFAEIIRAIF-QWQALGPITNGANMI-------TQIPTFNNFNITDSSGKVVLYLSSF 208

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
             + +  +  +II+ L  ++   A++ IR+++ A  ++   +   K+ +F +SS F G+ 
Sbjct: 209 FPMLIMIICVAIIVMLINSSYGRAFKAIREDEIAAEAMGINLAKHKMLSFVISSFFSGVG 268

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA FA   +     ++  +    ++ IV++GG+ S+S    +T + +   E         
Sbjct: 269 GALFAMFANNAQAKVYTSTMTYEILLIVVIGGIGSISGSVLSTFLYVACSEWWLRGLDMG 328

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
               +K     N     +  + + +V+L     ++  +  ++ L+
Sbjct: 329 SFLGIKLGLFRNGFRMVVFSVVIMIVVLFFRQGIMGNKEITDLLK 373


>gi|301050320|ref|ZP_07197209.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 185-1]
 gi|300297949|gb|EFJ54334.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 185-1]
          Length = 308

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 99/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGL 90
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +           L
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMVLGIDTGWL 71

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +      + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|17230030|ref|NP_486578.1| permease protein of branched-chain amino acid ABC transporter
           [Nostoc sp. PCC 7120]
 gi|17131630|dbj|BAB74237.1| permease protein of branched-chain amino acid ABC transporter
           [Nostoc sp. PCC 7120]
          Length = 308

 Score = 71.1 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 57/307 (18%), Positives = 115/307 (37%), Gaps = 31/307 (10%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---------RYGLSIW 93
            I  ++          +    G LSL     YA+G Y   IL +              + 
Sbjct: 11  LIVSMVLGALLGLSLYLPLMAGQLSLASPGFYALGGYIAAILSTKVFQTNSNSFPIPLLL 70

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L + ++A++SG  G+ +G+P+L+ RG YLAIAT+   E+ + + +    IT G  GI+  
Sbjct: 71  LEMLIAAVVSGLLGIAVGIPALRLRGIYLAIATIAFVEVLRVLSLNL-DITGGAVGIFGI 129

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            + +                       I   ++ L +  +S  +   L R  +  A+  I
Sbjct: 130 PQPFQ--------------------TPIEYLWITLPLLLISMVLFYRLERVRVGRAFTAI 169

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R+++ A  ++     + K+ AF + +   G+ G   A   +  +     F  +II ++ V
Sbjct: 170 REDELAAGAMGINPTYYKVLAFTLGAMLAGIVGVISAHFLNTWNARQGTFDASIIYLTFV 229

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ++GG  +         +   + E+  G+                     +  + +    +
Sbjct: 230 LIGGSRTFLGSVVGGMVFTALPEVLRGLAD-TGGFPTWLAQFLRDGRLIIFGLLIVTGTI 288

Query: 334 MRSHSLL 340
                L+
Sbjct: 289 FFPQGLV 295


>gi|218777930|ref|YP_002429248.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218759314|gb|ACL01780.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 295

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 96/306 (31%), Gaps = 25/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY M A G  ++  S  +++        +GA+    L ++  LS W  + +
Sbjct: 11  ILNGVAIGCIYGMVALGFVLIYKSTEVINFAQGELLMLGAFISYSLITQLHLSYWTALVI 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +  G  G I+    L+        A +I++      +              +      
Sbjct: 71  TILAMGIVGAILERVVLRSLVGEPTYAIVIVTIGISYFIRSVV---------SMVPGWGT 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                R+           V+       +++    L A + ++   + +  A R    NQ 
Sbjct: 122 DTYGFRTPFTDKFLRWGDVVISYEYLSIVVLAFVLIAVVFVFFGYSRMGTAMRATSQNQL 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +  ++       + +++A  G+ G   A         M      +  +   +LGG 
Sbjct: 182 AAVYMGISVTRVFSLTWTIAAALGGIGGILLAPITFV---HMNMGFIGLKAVPAAVLGGF 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS         I+     L        +  +  +             I L  V+++R   
Sbjct: 239 TSPPGAIVGGLIIGITESLAGVYLEEGWKDIAAW-------------IILIAVLIIRPQG 285

Query: 339 LLRLRT 344
           L  ++ 
Sbjct: 286 LFGIQE 291


>gi|307543704|ref|YP_003896183.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307215728|emb|CBV40998.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 335

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/329 (10%), Positives = 90/329 (27%), Gaps = 20/329 (6%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
                 + +  +   IY M A G++++   +             GA+  ++L + +  + 
Sbjct: 6   FFINNVVIAGSVSGSIYAMGAVGVTLIFSIMRFAHFAHGDMMTFGAFMVLLLTTLFPQAG 65

Query: 93  WLLIPVSAMISGA--CGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL-----IKWKPITN 145
             +   + ++       +  GL     R  Y  +    +  I   I      +  + +  
Sbjct: 66  AAIGVPTPILMLPLAMVLTAGLAVGIDRTFYRPLRAHGVKPIVMVIASLGVTLMLQGLIR 125

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
             AG   +         +  L          V+      Y+ +       ++  +L R+ 
Sbjct: 126 LFAGTGGSSLYVDDRKEIFRLPIPIEGVRMPVVITEPQLYLFVLTIICVVALHFFLSRSR 185

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +  A R + DN     +            + ++     +AG   +            F  
Sbjct: 186 LGKAMRAMSDNPDLAQASGINTNTIVAVTWMLAGGLAAIAGTLLSLDVTF--KPDLSFFL 243

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVEL-----------CCGMNFYYFNSLLKFDC 314
            + + +  I+GG+           ++     L                  +         
Sbjct: 244 LLPIFAAAIVGGVGHPFGAVAGGFVVGFAESLAVFNWSVLLRPFRDSLPEWLALPSNLSF 303

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                   +    L  +++ R   + + +
Sbjct: 304 VGTEYKIVVPFFILVAILVWRPTGIFKGK 332


>gi|170697126|ref|ZP_02888221.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria
           IOP40-10]
 gi|171315465|ref|ZP_02904702.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MEX-5]
 gi|170137962|gb|EDT06195.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria
           IOP40-10]
 gi|171099465|gb|EDT44200.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MEX-5]
          Length = 345

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/326 (12%), Positives = 97/326 (29%), Gaps = 18/326 (5%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           + F     +   +     V+                 + S+     +  + A   + V+ 
Sbjct: 25  ARFFNPAARQKLLAFASLVLLIAFFSFASPNFLDVDNLVSILQATAVNGVLAVACTYVII 84

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           + G + L+        A    ++ +++G+ + L I  +       G + G    K +   
Sbjct: 85  TSG-IDLSVGTLMTFCAVMAGVVLTKWGMPLPLGILAALCFGALSGSVSGFVIAKMKVPP 143

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                           +    +  G + +    R  +   T              +I  +
Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQDSLIGSLIPAL 191

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +   +L +  ++    + L RT        +  N++A       +   K++ +  S A 
Sbjct: 192 PIPNAVLILFLVAIGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAV 251

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+AG   A+  +   P + +  E   + ++VI      GG  S+        I+  +  
Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTN 311

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               M+       +       +    
Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYV 337


>gi|157370789|ref|YP_001478778.1| inner-membrane translocator [Serratia proteamaculans 568]
 gi|157322553|gb|ABV41650.1| inner-membrane translocator [Serratia proteamaculans 568]
          Length = 316

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 97/317 (30%), Gaps = 19/317 (5%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW------ 93
            +  +   IY + A G ++V G L +++        +GA S +                 
Sbjct: 9   VNGLMLGSIYALIALGYTMVYGILRIINFAHGDVLMVGALSALSTLGVLQHHFPGLSPYV 68

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              L   V+  +     M +   + +   +   +A LI       +L     +   +  +
Sbjct: 69  MLLLAALVAMAVCALVSMSIERLAYRRLRNAPRLAPLISGIGVSLLLQTLAMLIWSRNPL 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                L      +           +  +        L     +   ++L +  +    A 
Sbjct: 129 MFPQLLPMSPIALTQGSAEH----APAVITGTGIATLGVAVLVMLGLLLLVEHSRFGRAM 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   +N +    +        +  FA+  A   +AG   A++       M  F   I   
Sbjct: 185 RATAENPQVASLMGIDPNRIIILTFALGGALAAIAGIMMASNYGNAGFSM-GFLPGIKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ +L       A+L G++          +   L      +        + L  
Sbjct: 244 TAAVLGGIGNLR-----GAMLGGLLLGLFESLGTGYLGELTGGTFGSNYQDVFAFLILIA 298

Query: 331 VILMRSHSLLRLRTPSN 347
           V+++R   LL  R  + 
Sbjct: 299 VLVLRPSGLLGERVATR 315


>gi|39937096|ref|NP_949372.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009]
 gi|39650954|emb|CAE29477.1| possible branched-chain amino acid ABC transporter, permease
           protein [Rhodopseudomonas palustris CGA009]
          Length = 433

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 46/328 (14%), Positives = 113/328 (34%), Gaps = 32/328 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +   L+ L L    +     +    + I ++FA   +I++G  G+LS    + Y +G 
Sbjct: 24  LWIATALVLLLLPKLFASGGSLTTFSLVGISIIFALSYNILLGQTGMLSFGHAVYYGLGG 83

Query: 79  Y-----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +       ++  +++ + +  +  +          ++G    +  G   A+ +L ++E+ 
Sbjct: 84  FLAIHTINILGFNKWPIPLPFVPLIGGFAGLFFAALIGWVMTQRSGTAFAMISLGLAELV 143

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
            +  +  +    G+AGI              +  + F+        +I +YY++     +
Sbjct: 144 ASSALILRSFFGGEAGIS------------ANRTKLFKVFGLSFGPQIQIYYLVAAWTLI 191

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +   +  L RT +      +RDN +    +       +  AF  S  F G+AGA  A + 
Sbjct: 192 AIIAMYALTRTPLGRMCNAVRDNPERVQFVGYDPHVVRYLAFCFSGFFAGIAGALAAINF 251

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           +  +       ++  V+    +GG+            +  +  +   +            
Sbjct: 252 EIANSAYLGAVQSGTVLFAAYIGGIGFFIGPIVGAIFVTVLSLVLSDL------------ 299

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                       +   +V+L     +  
Sbjct: 300 ---TQVWQLYFGLFFIIVVLFAPGGITG 324


>gi|150395331|ref|YP_001325798.1| monosaccharide-transporting ATPase [Sinorhizobium medicae WSM419]
 gi|150026846|gb|ABR58963.1| Monosaccharide-transporting ATPase [Sinorhizobium medicae WSM419]
          Length = 360

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 94/293 (32%), Gaps = 18/293 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +   +   L  G   S   +  +  Q+ I  +     ++V+ + G + L+     
Sbjct: 52  LIVLILSVIIFGVLLGGKFFSAFTMTLILQQMAIVGIVGAAQTLVILTAG-IDLSVGAIM 110

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +        RYG+   L +     +   CG I G    + +     +   +   +  
Sbjct: 111 VLSSVVMGQFAFRYGVPPVLSVLCGLGVGALCGYINGTLVARMKLPPFIVTLGMWQIVLA 170

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           +  +     T     I     +               F  +F I      Y ++ M  L 
Sbjct: 171 SNFLYSANETIRAQAIAADAPILQF------------FGQNFRIGNAVFTYGVVAMVLLV 218

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A +   L RTA       + D+ +A       +    +S + +S     +AG        
Sbjct: 219 ALLWYALNRTAWGRYVYAVGDDPEAAQLSGVNVKRMLISIYTLSGLICALAGWALIGRIG 278

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
            +SP   +F+    + ++VI      GG  S+  +     I+         M 
Sbjct: 279 SVSPTAGQFANIESITAVVIGGISLFGGRGSIMGMLFGALIVGVFSLGLRLMG 331


>gi|72161696|ref|YP_289353.1| branched chain amino acid ABC transporter permease [Thermobifida
           fusca YX]
 gi|71915428|gb|AAZ55330.1| similar to ABC-type branched-chain amino acid transport system
           permease component [Thermobifida fusca YX]
          Length = 314

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 56/303 (18%), Positives = 108/303 (35%), Gaps = 41/303 (13%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
             +     +  + A  + + +   G+ S   V +Y +GAY+  IL  RY +  ++ I  +
Sbjct: 9   IVLIEATFLNFLLALSIQVPLRV-GVFSFAGVGSYGLGAYTAAILTIRYDVPAFVAIGAA 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + +   G +  L   +  G YLA+AT+    I   +      +T G  G+Y A      
Sbjct: 68  VVFAAVVGYLFSLIVARLNGLYLAMATIAFVLIISVLATNGGELTGGANGLYGALSDLTT 127

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G                          ++ +C + A ++    R  +      +R++ + 
Sbjct: 128 GG-------------------------VVAVCVVVAFLLALTERGPLRRRIEAVREDPEL 162

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             S+   ++  +  AF VS A    AGA  A  R  +SP+   F   ++ +++VI+GG  
Sbjct: 163 SMSMGIGVVTVRQLAFTVSGALGACAGAMNALLRTTVSPEEINFHLIVLALTMVIIGGSR 222

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S         I   +  +                         +  + + L  +     L
Sbjct: 223 SWMGAFIGAVIFTWLPSMLAT---------------TGRWQDVVYGLIIILAAIFMPTGL 267

Query: 340 LRL 342
           L L
Sbjct: 268 LGL 270


>gi|158313135|ref|YP_001505643.1| ABC transporter related [Frankia sp. EAN1pec]
 gi|158108540|gb|ABW10737.1| ABC transporter related [Frankia sp. EAN1pec]
          Length = 1087

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 56/277 (20%), Positives = 101/277 (36%), Gaps = 7/277 (2%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+   +   L            +      I+      + ++VG  G LSL  +    I A
Sbjct: 311 ALGITVGCALVAVWWLLPASWVNALNANAIWATIILSVVVLVGFTGQLSLAQLAFSGIAA 370

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
                L +  G  +   + V    +   G++  LP+L+ RG  LA+ TL +      +L 
Sbjct: 371 LIAGRLVATRGWPLEAALVVGVAGTAVVGVLFALPALRTRGLQLAVVTLGLGAAVDALLF 430

Query: 139 KWKPITNGKAGIYVADR-LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +    +   + +      L  L  T       F      V +      + L    L    
Sbjct: 431 QRGYHSPAASPLGALFGDLGTLEGTEVGDATLFGISLDKVTHPRGFATLSLLTFVLLGLA 490

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-- 255
           +  LRR         +R N++A  +L  +++ AKL AFA+S+A  G  G  +A       
Sbjct: 491 VANLRRGRAGRRLIAVRTNERAAAALGISVVGAKLYAFALSAAIAGFGGVLYAFYTYGER 550

Query: 256 ----ISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
                   +F    +I++I+  ++GG+  +S      
Sbjct: 551 GNIDYGGGLFSPFASILLIAYAVVGGVGWISGSFAGA 587



 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 90/290 (31%), Gaps = 12/290 (4%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y         +Y + A G+ ++    G+L++      A  AY++      +GL       
Sbjct: 7   YALLSLGAGALYALVATGVVVIQRGAGVLNMAQGALLAWAAYAFHGARDEWGLPAAPAAV 66

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           ++   + A G++     L+      A+  L+ +     ++     +  G         L 
Sbjct: 67  LAVGSTMAVGLVFHQLVLRPMRQATAVLRLMATLGLLIVIQSLLTLMYGGDVRRSPTVLP 126

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
               T+                 + +   L  +  + A +    R T +  A   + +N 
Sbjct: 127 TGKVTLFD-----------TAVGVDVLVRLAVVAAVVAGLWAVFRFTTLGLAATAVTENP 175

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +A  SL  +       A+   SA  G+ G   A  ++ +S         +  +++ ++  
Sbjct: 176 QAAASLGWSPDAVASWAWLAGSALAGLGGVLLAPLQNPLSAGGL-MLLIVPGLAVALVAR 234

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             SL  +      L  V             +    D +  +      +  
Sbjct: 235 FRSLPAVLVGALALGIVELETQVYLVADHPAWRGVDRAVPLAVIVFYLAV 284


>gi|84499453|ref|ZP_00997741.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Oceanicola batsensis HTCC2597]
 gi|84392597|gb|EAQ04808.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Oceanicola batsensis HTCC2597]
          Length = 335

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 46/323 (14%), Positives = 111/323 (34%), Gaps = 11/323 (3%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
               +    +   L    + + +  +G  + I +++    +      G+LS    +  A 
Sbjct: 12  FFISLAAFAIAGLLLPMVANRGVVFLGGVVAINMVYGIAFNFAFQKAGILSFGNAMFVAA 71

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL-IMSEIFQN 135
           GAY+   L ++     +L++ + + +SGA   ++       R   +  A + +      +
Sbjct: 72  GAYTTGYLVTQVPQIPFLMVILLSGLSGAILAMITGLLALRRSSGVYFAVITLAVGELIH 131

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L+          G+    R              F      +      YY +L +C L  
Sbjct: 132 VLVTKLTFLGRNDGLVGVYRPTL----------NFGLFEIDLGQGNAYYYFILVVCLLLI 181

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           + +  +       + +T++ ++     L T     KL A  +S A   + GA FA     
Sbjct: 182 AGLWVVWSNRFGRSLQTVKSDEMRSGFLGTDTDRRKLQALVISGAVTALGGALFAPWAQI 241

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++PD+  +S++   +   +LGG ++    A    +   +      +             +
Sbjct: 242 VTPDLAHWSQSTKPLLFALLGGTSTFFGPAVGAVLFGFLEYSTRTLVGISDLLTGGLLLA 301

Query: 316 FNMRHTTLMVIALFLVILMRSHS 338
             +     ++  +  +  +R   
Sbjct: 302 VVLAVPGGVLGLIIRLTRIRRSG 324


>gi|319785015|ref|YP_004144491.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170903|gb|ADV14441.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 349

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 61/336 (18%), Positives = 118/336 (35%), Gaps = 19/336 (5%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +         +V   L+        + + +      IL  +  A   +++ G  GL+S+
Sbjct: 6   TRTRAGTVTAIIVPLFLVAALALPAVASRGVIQDLFFILTMLTLAQIWNLLAGYGGLVSV 65

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                  IGAY+        G +  L IP+ A+ +    +     + + +G Y AI T +
Sbjct: 66  GQQAFVGIGAYAMFAGVILLGWNPVLAIPLGALAALVLAVPTAFFAFRLQGAYFAIGTWV 125

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           ++E+ + ++ +WK +  G        R           +R           +I  Y++ L
Sbjct: 126 IAEVTRLLVAQWKALGGGTG--TSLPREATSSILGTDAVRALFGVREAAARDIMAYWLAL 183

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +       I WL R+ +  A   +RDN  A  S+       + + F +++A  G+ GA 
Sbjct: 184 VLVVAVTGGIYWLLRSRLGLALAAVRDNVDAAQSVGVDTARLRWAVFLIAAAATGLTGAL 243

Query: 249 FAASRDRISPDMFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                 RISP            VI IV++GG+ ++        +   +            
Sbjct: 244 IFLQTARISPSAAFAVTDWTANVIFIVVIGGIGTIEGPILGVLVFFALRSALADY----- 298

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                        +   + +   +V+L     L  L
Sbjct: 299 ----------GSWYLMTLGLIAVVVMLFAPKGLWGL 324


>gi|206564117|ref|YP_002234880.1| putative ABC transporter transmembrane protein [Burkholderia
           cenocepacia J2315]
 gi|198040157|emb|CAR56140.1| putative transmembrane component of ABC transporter [Burkholderia
           cenocepacia J2315]
          Length = 345

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/326 (12%), Positives = 99/326 (30%), Gaps = 18/326 (5%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           S F     +   +     V+  +              + S+     +  + A   + V+ 
Sbjct: 25  SRFFNPAARQKLLAFASLVLLIVFFSFASSNFLEVDNLVSILQATAVNGVLAVACTYVII 84

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           + G + L+        A    ++ +++G+ + L I  +       G + G+   K +   
Sbjct: 85  TSG-IDLSVGTLMTFCAVMAGVVLTKWGMPLPLGILAALGFGALSGCVSGIVIAKMKVPP 143

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                           +    +  G + +    R  +   T              +I  +
Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQDSLIGNLIPAL 191

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +   +L +  ++    + L RT        +  N++A       +   K++ +  S A 
Sbjct: 192 PIPNAVLILFLVAIGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAV 251

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+AG   A+  +   P + +  E   + ++VI      GG  S+        I+  +  
Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTN 311

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               M+       +       +    
Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYV 337


>gi|187777546|ref|ZP_02994019.1| hypothetical protein CLOSPO_01137 [Clostridium sporogenes ATCC
           15579]
 gi|187774474|gb|EDU38276.1| hypothetical protein CLOSPO_01137 [Clostridium sporogenes ATCC
           15579]
          Length = 290

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 104/304 (34%), Gaps = 25/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G +++ G L +L+         G + +  + S + + + L I +
Sbjct: 6   LVNGITLGSIYCLAALGFNMIFGVLKMLNFAHGEILMFGTFVFFTMVSIFKIPLILAIIL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I+G  G+++   + K       +A L+ S     +L     +  G            
Sbjct: 66  TIVITGLIGVLLYFIAYKPVLKGDTMAPLLSSLGVSIMLEALGQLIWGTE---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    +  + +       ++ L    L   +  ++ ++ I    R +  N+K
Sbjct: 116 -IIPFPINIPKGIYSIASIKLSNIQIFIFLFSITLMIILYKFIMKSNIGLQIRALSYNRK 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        +  F++++    ++G   +   D +   M      I   +  ILGG+
Sbjct: 175 YAELMGIETDKITMIVFSLATILAMVSGILSSMYYDALYVTM-GSGVMIKAFAAAILGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL     L        +   + F             I L LV++++ + 
Sbjct: 234 GSIPGALVGGYILGVSESLVGAYISTSYVDGIAF-------------IILVLVLIIKPNG 280

Query: 339 LLRL 342
           +   
Sbjct: 281 IFGE 284


>gi|153011319|ref|YP_001372533.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
 gi|151563207|gb|ABS16704.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
          Length = 308

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 95/305 (31%), Gaps = 15/305 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     ++  + A GL+++ G + L++L   + Y +GAY      +  G   + ++   
Sbjct: 10  LNGIQFGILLFLVAAGLTLIFGVMDLINLAHGVLYMVGAYLTATFTAMTGSFFYGILIAL 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +      ++  L   +          L    +   +    K I               L
Sbjct: 70  PVTLVIGIVLEVLVFRRLYERSHLDQVLATFGLILIVNELVKIIWGAA----------PL 119

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +   +         + Y ++   ++      +A + + +  T I    R    N   
Sbjct: 120 SVPMPDSLSGSIQLFGNLRYPVYRLLIIAAGLATAAGLYVLVNHTRIGMLLRAGATNGDM 179

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   I    +  F + +   G AG   +             S  I+   ++++GG+ 
Sbjct: 180 VSALGINIRRLFMVVFGLGAMLAGFAGGMISPILSV--DPGMGDSILILTFVVIVIGGVG 237

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMRS 336
           S+     A   +  V  L          +LL    +  M  T    L  I +  V+  R 
Sbjct: 238 SVRGAFVAAITVGLVDTLGRTFGPMLLRNLLDPAAASQMGRTLVPMLTYILMAAVLYFRP 297

Query: 337 HSLLR 341
             L  
Sbjct: 298 TGLFP 302


>gi|294853022|ref|ZP_06793694.1| branched-chain amino acid transport system permease [Brucella sp.
           NVSL 07-0026]
 gi|294818677|gb|EFG35677.1| branched-chain amino acid transport system permease [Brucella sp.
           NVSL 07-0026]
          Length = 315

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 106/324 (32%), Gaps = 38/324 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             +     +        +   +  +    LI    A   +I+ G  G  S    + Y +G
Sbjct: 6   ALLAIIAAVLALGAPLFASPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGLG 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   I   ++ L  +    +  + +    M++GLP L+ +G Y AIATL + ++   I 
Sbjct: 66  AYGAGIAMVQFNLPFFAGAAIGIVAAVVFAMLIGLPILRLKGHYFAIATLALPQVMAAIT 125

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                                    V             +  + F Y   L +  ++  +
Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L R+        IR+N++   ++       K+ A  +S AF  MAGA  A     + 
Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMGINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222

Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P+       N+ +I + + GG  ++         L  V                    ++
Sbjct: 223 PEAAYQVQLNVQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLSS--------------AY 268

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
                    I + + +++    L 
Sbjct: 269 TDVAGMFFGIVIVVAVVLMPRGLA 292


>gi|150389845|ref|YP_001319894.1| inner-membrane translocator [Alkaliphilus metalliredigens QYMF]
 gi|149949707|gb|ABR48235.1| inner-membrane translocator [Alkaliphilus metalliredigens QYMF]
          Length = 292

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 82/303 (27%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G S+V   +   +        IGAY      +   L       +
Sbjct: 8   LINGLSIGSVYALMAVGYSLVYSIMNFSNFAHGGVIMIGAYFGFYAMTALNLPFIAAFAL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A  SG   +++   + +          L          I  + I     G         
Sbjct: 68  AAAGSGILAILLERIAYRPLRKR-NAPFLYFIISAMGASIFLENIVIATVGPTFRTYPRV 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +               +        + +      + ++  + +T      R    +++
Sbjct: 127 FDSAP--------ISFGAISIGRLDITMFIISAISLSILMYIIGKTRTGMGIRATSYSER 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +           F +     G+AG  F       +         +      + GG+
Sbjct: 179 ASALMGVNTDRIIFIVFGLGGVLAGIAGMLFGMKY---TVYPQIGFITMKSFIAAVFGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL      + +L  +  +  G                +     +  + L LV+++R   
Sbjct: 236 GSLPGAVIGSVLLGTIETITAGYIS-------------SQYRDLIAFVLLILVLIIRPSG 282

Query: 339 LLR 341
           L+ 
Sbjct: 283 LMG 285


>gi|298294034|ref|YP_003695973.1| inner-membrane translocator [Starkeya novella DSM 506]
 gi|296930545|gb|ADH91354.1| inner-membrane translocator [Starkeya novella DSM 506]
          Length = 291

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 52/297 (17%), Positives = 97/297 (32%), Gaps = 26/297 (8%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            IY M A G  +++ S  +++        +GAY+ VIL + +GL+ ++ + ++ +     
Sbjct: 16  SIYAMVALGFVLLIRSANVVNFAQGEFSMLGAYAMVILLTGFGLNYFVSLGLAVVCMAVF 75

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G+I    +     D   I  +I +     +L      T G +              +  L
Sbjct: 76  GVIFASITYWPLRDRGQIPVIISTIGATILLSNLILATYGPS-----------PEVLPGL 124

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                F    V  +     ++     L     L   +T +    +    +++    L   
Sbjct: 125 FDGAGFLVGNVFMDSQYLTIIAVTAVLVGLQYLIFEKTMVGKKLQATSQDKEMASLLGIP 184

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +I      FA S+A  G+AG   A                +   +  I+GG  S+     
Sbjct: 185 VIAMIFGTFAYSAALGGLAGILVAPILFV--SVGIGPLIALKAFAANIIGGFGSIPGAIC 242

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
              I+  V  L        +     F             + L  V+L+R   L   R
Sbjct: 243 GGLIIGIVETLGATYISVPYKDAFAF-------------LMLLAVLLVRPQGLFGER 286


>gi|298292105|ref|YP_003694044.1| inner-membrane translocator [Starkeya novella DSM 506]
 gi|296928616|gb|ADH89425.1| inner-membrane translocator [Starkeya novella DSM 506]
          Length = 305

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 89/306 (29%), Gaps = 16/306 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL--I 96
           + +      IY + A G ++V G +G+++      + + A+  +I        + +    
Sbjct: 8   LINGLTLGSIYGLIAIGYTMVFGIIGMVNFAHGDVFMVSAFIALICFLLLTTVLGITSIF 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A++         L S                       I    +      +    R 
Sbjct: 68  LALAIVLVVAMFFTSLLSWAIERVAYRPLRGSFRLAPMISAIGMSILLANFVQVSQGPRN 127

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
             +   +  +I      +  V        +++    L A     +++T++  A R    +
Sbjct: 128 KPIPPMITDVITLMDSGTYQVTLAWKQIIIMVITSALLAGFWYLVQKTSLGRAQRACEQD 187

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +K    L   +       F + +A   +AG  +      ++     F   +   +  +LG
Sbjct: 188 RKMAALLGINVDHTISLTFVIGAALAAVAGVMYLMYYG-VANFADGFVPGVKAFTAAVLG 246

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ SL        ++  +           +  +  F               L + ++   
Sbjct: 247 GIGSLPGAVLGGLLIGLIETFWSAYFSIEYKDVAAFS-------------ILAITLIFMP 293

Query: 337 HSLLRL 342
             LL  
Sbjct: 294 QGLLGR 299


>gi|170746509|ref|YP_001752769.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
 gi|170653031|gb|ACB22086.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
          Length = 328

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 98/270 (36%), Gaps = 15/270 (5%)

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S      + + +Y         G +  L I    + +   G++ G  +++ +G Y ++ T
Sbjct: 73  SFGHAAYFGMASYLCAYTAKSLGFTPELAILAGTVTAALLGLVFGALAIRRQGIYFSMIT 132

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L ++++     ++    T G+ GI    R                F +  +  +  MY V
Sbjct: 133 LALAQMVFFFSLQA-KFTGGEDGIQAVPR-------------GNLFGAISLADDRVMYAV 178

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +      +I  +  +      + IRDN+    SL       KL+ F +S+   G+AG
Sbjct: 179 VAVVFMAGMLLIYRIIHSPFGQVLKAIRDNEPRAISLGYRASQYKLAVFVLSATLAGLAG 238

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +  A      S     +S +  V+ + ++GGM ++        +++ +          + 
Sbjct: 239 STKAIVFQLASLTDVHWSMSGEVVLMTLVGGMGTVFGPIVGALVIVTMETYLAQF-GAWV 297

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
             +        +      ++ L   ++ R 
Sbjct: 298 TIIQGCVFVLCVLLFREGIVGLIARMIRRP 327


>gi|312113603|ref|YP_004011199.1| inner-membrane translocator [Rhodomicrobium vannielii ATCC 17100]
 gi|311218732|gb|ADP70100.1| inner-membrane translocator [Rhodomicrobium vannielii ATCC 17100]
          Length = 304

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 104/312 (33%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--------YVILGSRYGL 90
           + +      IY + A G ++V G +G+++      + IGA+         + +  +   L
Sbjct: 8   LINGLTLGSIYGLIAIGYTMVYGIVGMINFAHGEVFMIGAFIALIAVLSLFALGVTAVPL 67

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           ++ L + ++  ++G  G  +   + +   +   +A LI +      L  +  +T G    
Sbjct: 68  ALLLALVIAMALTGLWGWAIERLAYRPLRNSFRLAPLITAIGMSIALQTFVALTQGARSK 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +          +R            V        +++    + A+    +  T++  A 
Sbjct: 128 PLPP-------VIRGGFTLSEGNGFAVSLSYMQILIIVTTVVVMAAFSYLINSTSLGRAQ 180

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    ++K        +       F + +A   +AG  F A    I   +  F   I   
Sbjct: 181 RACEQDRKMAALCGVNVDRTISLTFVIGAALAAVAGLMFLAYYGVIDFFV-GFVAGIKAF 239

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ SL        ++  +     G     +  +  F               L +
Sbjct: 240 TAAVLGGIGSLPGAMLGGLLIGLIEVFWAGYFTAQYKDVAAFS-------------ILAI 286

Query: 331 VILMRSHSLLRL 342
           V++     LL  
Sbjct: 287 VLIFMPSGLLGR 298


>gi|62182062|ref|YP_218479.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|168232707|ref|ZP_02657765.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194471839|ref|ZP_03077823.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197248855|ref|YP_002148486.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|224585354|ref|YP_002639153.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Paratyphi C
           strain RKS4594]
 gi|238910435|ref|ZP_04654272.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Tennessee
           str. CDC07-0191]
 gi|62129695|gb|AAX67398.1| ABC superfamily (membrane), branched-chain amino acid transporter,
           high-affinity [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|194458203|gb|EDX47042.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197212558|gb|ACH49955.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|205333150|gb|EDZ19914.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|224469882|gb|ACN47712.1| high-affinity branched-chain amino acid transport system permease
           protein [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|322716550|gb|EFZ08121.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 308

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFIGAIIIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWIVGSSENFAASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|158314959|ref|YP_001507467.1| ABC transporter related [Frankia sp. EAN1pec]
 gi|158110364|gb|ABW12561.1| ABC transporter related [Frankia sp. EAN1pec]
          Length = 943

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 57/300 (19%), Positives = 116/300 (38%), Gaps = 10/300 (3%)

Query: 5   SLRLNKYDKILCL--LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
             RL +   I  L    ++   L+ + L     Q     +   IL Y +    ++I+ G 
Sbjct: 308 PERLRRLWWIRNLERAPLLLLGLIAVILPLVIGQPSRQLLYTVILGYAICGASVTILTGW 367

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G LSL  +    +GA    ++ +     + L +  + + +      + +         L
Sbjct: 368 AGQLSLGQMAFAGLGA----LIAATLNRGLHLTVGGTTISASPQPFAVAVALAMLVTAVL 423

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI- 181
           A    I +   + +L+       G A      R  FL     +   F R     +     
Sbjct: 424 ATLVGIGALRVRGLLLAVSTFAFGIAAEQYLYRREFLHDEGTTTASFPRASVFGIDIGTQ 483

Query: 182 -FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
              YY++L +  +   +I  LRR+ +      +RDN  A  +     +  KL +FA++  
Sbjct: 484 RAYYYLVLVVLVIVMVVIARLRRSGVGRTTIGVRDNSVAAAAYTVGPVRVKLRSFALAGG 543

Query: 241 FIGMAGAFFAASRDRISPDMFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
             G+ GA  A +   +      F   ++++++S+VI+GG+ S+      +  ++G+  + 
Sbjct: 544 LAGLGGALLAGAVQEVPYTDRYFLSTDSLVLVSVVIIGGVGSVIGPVLGSLWVVGLPAIF 603



 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/220 (10%), Positives = 71/220 (32%), Gaps = 8/220 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  L+  + A G+ +V  +  +++        +G+    +L  RY +  W+ + +
Sbjct: 9   LFDGAVSGLVIGLLAAGIVLVHRATRVINFAVANMGLVGSALLALLVVRYNVPYWIALVL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +    G I+ L  ++       +  L+ +     + +                   +
Sbjct: 69  VLAVGALFGAIIDLAVVRRLFTAPRVIVLVATTGVAQLALTIV--------TAYPKLDDY 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             ++          P   +        +L+ +  ++  + L+L RT +    +   DN +
Sbjct: 121 PTSSYPLPWTGTWTPFDDLQITAAQLSILVTVPVVTLLLGLFLSRTVLGRTVQACADNPE 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
                  +        +AV+     +     +A    ++ 
Sbjct: 181 LARLQGISPKTMSTVVWAVAGLLATLCLILISAQNRSLTQ 220


>gi|269960043|ref|ZP_06174420.1| D-ribose transport system permease protein [Vibrio harveyi 1DA3]
 gi|269835342|gb|EEZ89424.1| D-ribose transport system permease protein [Vibrio harveyi 1DA3]
          Length = 327

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALIFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + +     +  +       +    +   + +                + F  
Sbjct: 88  LCGAFAASMIALEVPVLIAVPTALFAGAALGAISGIIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVIVFAAAWYL 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGMLAALAGIIVTSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLV 322


>gi|187476993|ref|YP_785017.1| branched-chain amino acid ABC transporter permease [Bordetella
           avium 197N]
 gi|115421579|emb|CAJ48089.1| putative branched-chain amino acid ABC transporter, permease
           protein [Bordetella avium 197N]
          Length = 290

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 97/304 (31%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +    Y + + GL+++ G + +++        +G Y+  +L    G   ++ +  
Sbjct: 8   IVNGLLLGGAYAIISIGLTLIFGVVRVVNFAHGEFLMVGMYATYLLAMNLGWHPYVSLAP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A++    G  M    ++   D      +  +      L+    +  G         L  
Sbjct: 68  VALLLFVIGAAMQRFVVQPLLDADGHIQIFATVGVSTALMNLALLVFGADVRATPVELGT 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +         L+    L+  +  ++ RT +  A+R +  ++ 
Sbjct: 128 G-----------IISLGSISVVSGQLITLIAALALAGGMHWFMTRTYLGRAFRAVAQHRN 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    + AF + SAF+G+A A               F        IV+LGGM
Sbjct: 177 AAALMGVNVRGIYVLAFGIGSAFVGVAAALLTPQYPVFPTIGTYFVLT--AFVIVVLGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL      + ++  V  L                         +      L++++R   
Sbjct: 235 GSLFGALLGSMLIGLVDSLAGYYI-------------APDLKEVVYFAIFLLILVLRPTG 281

Query: 339 LLRL 342
           L  L
Sbjct: 282 LFGL 285


>gi|33591536|ref|NP_879180.1| branched chain amino acid ABC transporter permease [Bordetella
           pertussis Tohama I]
 gi|33603395|ref|NP_890955.1| branched chain amino acid ABC transporter permease [Bordetella
           bronchiseptica RB50]
 gi|33571178|emb|CAE40680.1| probable branched-chain amino acid transport system, permease
           component [Bordetella pertussis Tohama I]
 gi|33577519|emb|CAE34784.1| probable branched-chain amino acid transport system, permease
           component [Bordetella bronchiseptica RB50]
 gi|332380877|gb|AEE65724.1| branched chain amino acid ABC transporter permease [Bordetella
           pertussis CS]
          Length = 306

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 96/308 (31%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL++V G + +++L     Y  GAY       R G     ++  
Sbjct: 10  LLNGLQFGLMLFLIAAGLTLVFGIMDIMNLAHGSLYMAGAYVAAETMQRTGSFTAAVLVA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +        ++      K          L + +    +L  +  I      + +      
Sbjct: 70  ALATGLVGAVLELTLIRK----------LAVRDHLAQVLGTYAVILIANDLVKMIWGPAP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + + +         ++Y  +   +++     +A +  ++ RT      R    N++
Sbjct: 120 VMLNMPAALSGPVRLLPDLLYPAYRLMIIVFGLAAAAGLYWFVTRTRAGVLVRAGASNRQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L  F + +    +AGA                   I+V+  +++GG+
Sbjct: 180 MATLMGVRVPLLFLGVFVLGAMLAAVAGALLGPV--TAVQIGMGEGILILVLVCIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335
            S+        ++  V              +     +           + + +  V++ R
Sbjct: 238 GSIRGAFVGALLVGMVDTAGRAFLPMLLRQVFPPAVASSVGPTLAAIAIYVLMAGVLVFR 297

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 298 PAGLFPAR 305


>gi|332701495|ref|ZP_08421583.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332551644|gb|EGJ48688.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 305

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 86/304 (28%), Gaps = 13/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      +Y + A G ++V G + L++      +A G Y  VIL S       +    
Sbjct: 8   FVNGITLGGVYALVALGYTMVYGIIQLINFAHGEFFAAGGYVGVILLSFLAAHGVMDTHP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +  A  + MG  ++            +       +L+    ++       +  +  +
Sbjct: 68  WLGLGIALLLTMGYCAMLAMAVEKIAYKPLRQSSRLAVLLSALGMSIFLQNGLMLTQGVY 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        +    V   +    +L     L  ++   + RT I  A R    ++ 
Sbjct: 128 DKAYPIGFTAG-GWDFGNVRISLMQVLILGLTAILLVALNALVFRTNIGKAMRATAQDKV 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           FA+ +A    AG         +      F   I   +  +LGG+
Sbjct: 187 MSALVGIDSNRIIALTFAIGAALAAAAGILVGLYYGSV-RYDMGFVPGIKAFAAAVLGGV 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +++       I+  V  +      +                     I L  V+      
Sbjct: 246 GNITGAMLGGFIIGMVEIMAAAYIPHG-----------GEYKDVFAFIILIAVLYFMPTG 294

Query: 339 LLRL 342
           ++  
Sbjct: 295 IMGE 298


>gi|330817552|ref|YP_004361257.1| Branched-chain amino acid ABC-type transport system, permease
           component [Burkholderia gladioli BSR3]
 gi|327369945|gb|AEA61301.1| Branched-chain amino acid ABC-type transport system, permease
           component [Burkholderia gladioli BSR3]
          Length = 305

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 90/305 (29%), Gaps = 17/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++   GL+++ G +G++++       IGAY+  +             PV   +
Sbjct: 18  LSLFSVLLLMGLGLAVIFGQMGVINMAHGEFMTIGAYTVYLFSWFAQNVWHGFTPVYFFV 77

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +      +   +       L     +       +L  W      +     A     +   
Sbjct: 78  AIVAAFFIAFAAGWLAEWAL--IRHLYRRPLDTLLATWGLSLGMQQVFRSAFGPKEVSPA 135

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P+  +   +   +V+     ++  ++L L R+      R    N+    +
Sbjct: 136 LPDWLMGSWEPAQGLDIPVSGMFVMGLALIMTGGLLLALYRSRWGLRVRATVANRPMANA 195

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     G+AGA F A     +         +    +V  GG  SL 
Sbjct: 196 AGINTRLTDRMTFAIGCGVAGVAGAAFTAIGS--TGPTSGSLYIVDSFLVVTFGGAASLL 253

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +  +  +                         L ++ + +++++R   L   
Sbjct: 254 GTVASAFGIAQMQSISEFFLS-------------GSTARVLTLLTVVIILMLRPQGLFAS 300

Query: 343 RTPSN 347
           +    
Sbjct: 301 KVRRA 305


>gi|91976057|ref|YP_568716.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91682513|gb|ABE38815.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 433

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/329 (14%), Positives = 115/329 (34%), Gaps = 32/329 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +   L  L L    +     +    + I ++FA   +I++G  G+LS    + Y +G 
Sbjct: 24  IWIATALTLLLLPKIFASGGSLTTFSLVGISIIFALSYNILLGQTGMLSFGHAVYYGLGG 83

Query: 79  Y-----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +       ++ G+++ + + L+  +  +       ++G    +  G   A+ +L ++E+ 
Sbjct: 84  FLAIHAINLLGGNKWPIPLPLVPLIGGVAGLFFAALIGWVMTQRSGTAFAMISLGLAELV 143

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
            +  +  +    G+AGI              +  + F+        +I +YY++     +
Sbjct: 144 ASSALILRTFFGGEAGIS------------ANRTKLFKLFGLNFGPQIQIYYLVAAWTLI 191

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +   +  L RT +      +RDN +    +       +  AF  S  F G+AGA  A + 
Sbjct: 192 AIIAMYALTRTPLGRMCNAVRDNPERVQFVGYDPHVVRYLAFCFSGFFAGIAGALAAINF 251

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           +  +       ++  V+    +GG+            +  +      +   +        
Sbjct: 252 EIANSAYLGAVQSGTVLFAAYIGGIGFFIGPIVGAIFVTILSLGLSDLTHVW-------- 303

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                       +    V++     +  L
Sbjct: 304 -------QLYFGLFFIAVVMFTPGGITGL 325


>gi|91212938|ref|YP_542924.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli UTI89]
 gi|110643697|ref|YP_671427.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli 536]
 gi|117625729|ref|YP_859052.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli APEC O1]
 gi|191171577|ref|ZP_03033125.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli F11]
 gi|218560519|ref|YP_002393432.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli S88]
 gi|237703196|ref|ZP_04533677.1| high-affinity branched-chain amino acid transport system permease
           livH [Escherichia sp. 3_2_53FAA]
 gi|300987353|ref|ZP_07178161.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 200-1]
 gi|91074512|gb|ABE09393.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli UTI89]
 gi|110345289|gb|ABG71526.1| high-affinity branched-chain amino acid transport system permease
           protein LivH [Escherichia coli 536]
 gi|115514853|gb|ABJ02928.1| high-affinity branched-chain amino acid transport system permease
           protein LivH [Escherichia coli APEC O1]
 gi|190908204|gb|EDV67795.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Escherichia coli F11]
 gi|218367288|emb|CAR05066.1| leucine/isoleucine/valine transporter subunit ; membrane component
           of ABC superfamily [Escherichia coli S88]
 gi|226902460|gb|EEH88719.1| high-affinity branched-chain amino acid transport system permease
           livH [Escherichia sp. 3_2_53FAA]
 gi|294494115|gb|ADE92871.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli IHE3034]
 gi|300306221|gb|EFJ60741.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 200-1]
 gi|307628523|gb|ADN72827.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli UM146]
 gi|315286140|gb|EFU45578.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 110-3]
 gi|320194042|gb|EFW68675.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Escherichia coli WV_060327]
 gi|323950119|gb|EGB46002.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H252]
 gi|324014552|gb|EGB83771.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 60-1]
          Length = 308

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMLGIDTGWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVVAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|115526206|ref|YP_783117.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115520153|gb|ABJ08137.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 343

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 117/315 (37%), Gaps = 20/315 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R  ++        +     +FLF            +  +I    +FA  L +++G  G+
Sbjct: 12  MRRARWHWAELAFWLAAAATIFLFPHRYL-------ILTEIAWLALFALSLDLILGYAGI 64

Query: 66  LSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           +SL     + +GAY+  +L          L + V+   +   G +     ++       +
Sbjct: 65  VSLGHAAFFGVGAYTAGLLAVHGLVTEPVLALLVAGCAAMVLGFVTSFLVIRGADLTRLM 124

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL ++ + + +  ++  IT G  G+        LG               F +Y    +
Sbjct: 125 VTLGIALLLRELANRFSNITGGFDGLQGIVMAPVLGL------------FEFDLYGQTGF 172

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
              L + F+   +   +  +    + R IR+N     ++   +    ++ +++++ + G+
Sbjct: 173 IYCLAVLFVLFLLARRVVHSPFGLSLRAIRNNPLRASAIGIPVNRRLVAIYSLAAFYAGV 232

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA    S    S D+F F  +  ++ ++++GG   L        I   + EL   +   
Sbjct: 233 AGALSTQSTALASLDVFAFDRSADLLLVLVIGGTGYLYGGLIGAVIFKLLQELFSTLTPQ 292

Query: 305 YFNSLLKFDCSFNMR 319
           Y+   +       + 
Sbjct: 293 YWQFWIGLVLVIIVL 307


>gi|294084349|ref|YP_003551107.1| inner-membrane translocator [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663922|gb|ADE39023.1| inner-membrane translocator [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 338

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/334 (9%), Positives = 93/334 (27%), Gaps = 19/334 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           FL   A  +   +           + A G++++   L   +       A GA   +++  
Sbjct: 5   FLNPLAILANYILVPGLAYGSQLALGALGVTLIYSVLRFSNFAHGETMAFGAMITIMVTW 64

Query: 87  RYG---------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
                        +  L +PV  + +    +       ++  +  A +   +      + 
Sbjct: 65  WLQSLGVSIAPLPTALLALPVGILGTTILCLTTDRVVYRYYREQKASSVTYLIVSVGVMF 124

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +    I                        +     +  +  +      ++    + A++
Sbjct: 125 VTGGLIRFIIGPNDQLFGDGARFIMKARAFKQMTGLNEGLAIKTSQGVTVITAVIVVAAV 184

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L RT    + R   DN+              + A+ +++A   +AG  +   +    
Sbjct: 185 FWFLNRTRTGKSMRAFSDNEDLALLSGINPDRVVMIAWIITAALATIAGTLYGLDKSF-- 242

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK------ 311
                    + + +  I+GG+ S         ++     +           +L       
Sbjct: 243 KPFVYLQLLLPIFAAAIVGGVGSPVGAIAGGFVIAFSELIITFAYKRVVTYMLPESMAPE 302

Query: 312 --FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                        +  + L +V+L++   +   +
Sbjct: 303 GLVQFLSTDYKFAVSFVILVIVLLVKPTGIFSGK 336


>gi|124024660|ref|YP_001018967.1| branched-chain amino acid ABC transporter permease [Prochlorococcus
           marinus str. MIT 9303]
 gi|123964946|gb|ABM79702.1| putative membrane protein of urea ABC transport system
           [Prochlorococcus marinus str. MIT 9303]
          Length = 375

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 51/356 (14%), Positives = 107/356 (30%), Gaps = 55/356 (15%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             L+ V   ++  +         +  ++  + L   + A G+ ++ G  GLLSL   I +
Sbjct: 10  WPLVIVWVLIIAAIVAAPAVVSVFGLNLLGRFLSLSIVALGIDLIWGFTGLLSLGQGIFF 69

Query: 75  AIGAYSYVIL---------------------------GSRYGLSIWLLIPVSAMISGACG 107
           A+G Y+  +                              +   S W  +    +I     
Sbjct: 70  ALGGYAAAMYLQLNSSSEQPNGIPEFFGLYGVDQLPGFWQPFHSPWFTLIAIWLIPALLA 129

Query: 108 MIMGLPSLKFRGD--YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
            ++G    + R    Y +I T     +F N     + + NG  G+               
Sbjct: 130 ALLGNLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLK------------TD 177

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
           +   F         +   +++   M  L+   + W+ R         IRD++        
Sbjct: 178 VTELFGQQVGSAFMQRGFFWLTAVMVILAWLAVRWVVRGRFGEVLIAIRDDEPRLRFAGY 237

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                K   FA++    G+ GA +      +SP       +I ++  V +GG  +L    
Sbjct: 238 NPTLFKTIVFAMAGGLAGIGGALYTVQSGIVSPQYMTVPFSIDMVIWVAVGGRGTLIGAI 297

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
               ++                   +    +      ++     LV+      ++ 
Sbjct: 298 LGALVINLARS--------------QISTVWPEGWLFILGGLFILVVTALPEGVVG 339


>gi|33864491|ref|NP_896051.1| putative membrane protein of ABC transport system [Prochlorococcus
           marinus str. MIT 9313]
 gi|33641271|emb|CAE22401.1| Putative membrane protein of ABC transport system [Prochlorococcus
           marinus str. MIT 9313]
          Length = 375

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 51/356 (14%), Positives = 107/356 (30%), Gaps = 55/356 (15%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             L+ V   ++  +         +  ++  + L   + A G+ ++ G  GLLSL   I +
Sbjct: 10  WPLVIVWVLIIAAIVAAPAVVSVFGLNLLGRFLSLSIVALGIDLIWGFTGLLSLGQGIFF 69

Query: 75  AIGAYSYVIL---------------------------GSRYGLSIWLLIPVSAMISGACG 107
           A+G Y+  +                              +   S W  +    +I     
Sbjct: 70  ALGGYAAAMYLQLNSSSEQPNGIPEFFGLYGVDQLPGFWQPFHSPWFTLIAIWLIPALLA 129

Query: 108 MIMGLPSLKFRGD--YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
            ++G    + R    Y +I T     +F N     + + NG  G+               
Sbjct: 130 ALLGNLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLK------------TD 177

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
           +   F         +   +++   M  L+   + W+ R         IRD++        
Sbjct: 178 VTELFGQQVGSAFMQRGFFWLTAVMVILAWLAVRWVVRGRFGEVLIAIRDDEPRLRFAGY 237

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                K   FA++    G+ GA +      +SP       +I ++  V +GG  +L    
Sbjct: 238 NPTLFKTIVFAMAGGLAGIGGALYTVQSGIVSPQYMTVPFSIDMVIWVAVGGRGTLIGAI 297

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
               ++                   +    +      ++     LV+      ++ 
Sbjct: 298 LGALVINLARS--------------QISTVWPEGWLFILGGLFILVVTALPEGVVG 339


>gi|99081116|ref|YP_613270.1| inner-membrane translocator [Ruegeria sp. TM1040]
 gi|99037396|gb|ABF64008.1| inner-membrane translocator [Ruegeria sp. TM1040]
          Length = 336

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/334 (10%), Positives = 89/334 (26%), Gaps = 19/334 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           FL      S   +           + A G++++ G L   +       A G    ++   
Sbjct: 3   FLNAFVALSNFVLIPGIAYGSQLALGALGVTLIYGILRFSNFAHGDTMAFGTMVVILFTW 62

Query: 87  RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            +              L +P+  +++    +I      KF  +  A   + +      + 
Sbjct: 63  LFQSWGISAGPLPTALLALPIGIVMTMGLVLITDKAVFKFYREQKAKPVVFVMVSLGVMF 122

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +    +                        +        +  +      ++    + A +
Sbjct: 123 MMNGLVRFIIGPGDQRFGDGERFIIKARTFKQMTGLDEGLAIKTSQGITVVTAIVVVALL 182

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L +T    + R   DN+              +  + + +A   +AG  +   +    
Sbjct: 183 FWFLNKTRTGKSMRAYSDNEDLALLSGINPERVVMITWIIVAALATIAGTLYGLDKSF-- 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF- 316
                F   + + +  I+GG+ S         ++     +           LL       
Sbjct: 241 KPFTYFQLLLPIFAAAIVGGLGSPLGAIAGGFVIAMSEVMITYAWKKVGGYLLPESLEPE 300

Query: 317 -------NMRHTTLMVIALFLVILMRSHSLLRLR 343
                        +    L +V+L +   + + +
Sbjct: 301 GLAQLLSTDYKFAVSFAILVVVLLFKPTGIFKGK 334


>gi|323126672|gb|ADX23969.1| branched-chain amino acid transport system permease protein
           [Streptococcus dysgalactiae subsp. equisimilis ATCC
           12394]
          Length = 284

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 105/303 (34%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A G ++V G + L++      Y +GA+    L +   L+ +L + +
Sbjct: 5   LVNGLILGSVYALLALGYTMVYGIIELINFAHGDLYMMGAFIGYYLINALQLNFFLALIL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++   + +       IA LI +     +L        G         L  
Sbjct: 65  TMVFTACLGVLIEFLAYRPLRQSTRIAALITAIGVSFLLEYGMVYFVGAEARAFPQALKV 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +                 +        +LL    L  ++   +++T +  A R +  +  
Sbjct: 125 VKYH-----------LGPISVTNVQLIILLVSLTLMLALQFIVKQTKMGKAMRAVSVDSD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ SA  G AG       + I+P M   +  +      +LGG+
Sbjct: 174 AAQLMGINVNSTISFTFALGSALAGAAGVLIGLYYNSINPLM-GMTPGLKAFVAAVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    I+  +                      +     ++ + L +++L+R   
Sbjct: 233 GIIPGAAFGGFIIGLLET-------------FSTAIGLSSYRDAVVYVVLIMILLVRPAG 279

Query: 339 LLR 341
           LL 
Sbjct: 280 LLG 282


>gi|326318478|ref|YP_004236150.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323375314|gb|ADX47583.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 297

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 96/304 (31%), Gaps = 16/304 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                I ++ A GL I  G++G++++       +GAY+ V+     G  +   IP++   
Sbjct: 9   LSVGAILLLVALGLVITYGAMGVINMAHGEMIMVGAYTAVLAQIWLGWGLIASIPLAFAS 68

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +   G+++    ++     LA   L    +   +    +              L      
Sbjct: 69  AALLGLLIERCVVRKLYGRLADTLLATWGVAILVQQAVRLEGGLSFFGIHVQGLGPGLQN 128

Query: 163 VRSLIRFFR-FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
           +              V    +  +++     L+      L RT +    R I  N +   
Sbjct: 129 LPVPEMLQGVVQVGGVAINAYRAFIVASTAVLTLGTWFLLYRTTVGMQVRAIIRNPRMAA 188

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           +    +       FA  +   G+AG   A  +          +  +    +V+ GG+ SL
Sbjct: 189 ACGIDVQRVNAWTFAFGAGLAGVAGVLVAGFKTV--SPDMGTTLVVDGFLVVVAGGLGSL 246

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +L  V  +   ++       + F               + L+I++R   L  
Sbjct: 247 LGAVVTAVVLGEVNGVIATLSNDIVGRAVVFG-------------LVILLIVVRPQGLFS 293

Query: 342 LRTP 345
            +  
Sbjct: 294 FKGR 297


>gi|256112105|ref|ZP_05453041.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella melitensis bv. 3 str. Ether]
 gi|265993544|ref|ZP_06106101.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|262764414|gb|EEZ10446.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
          Length = 315

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 106/324 (32%), Gaps = 38/324 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             +     +        +   +  +    LI    A   +I+ G  G  S    + Y +G
Sbjct: 6   ALLAIIAAVLALGAPLFASPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGVG 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   I   ++ L  +    +  + +    M++GLP L+ +G Y AIATL + ++   I 
Sbjct: 66  AYGAGIAMVQFNLPFFAGAAIGIVAAVVFAMLIGLPILRLKGHYFAIATLALPQVMAAIT 125

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                                    V             +  + F Y   L +  ++  +
Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L R+        IR+N++   ++       K+ A  +S AF  MAGA  A     + 
Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMGINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222

Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P+       N+ +I + + GG  ++         L  V                    ++
Sbjct: 223 PEAAYQVQLNVQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLST--------------AY 268

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
                    I + + +++    L 
Sbjct: 269 TDVAGMFFGIVIVVAVVLMPRGLA 292


>gi|297566726|ref|YP_003685698.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
 gi|296851175|gb|ADH64190.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
          Length = 300

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 106/307 (34%), Gaps = 14/307 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   IY + A GL++ VG +G+++        IGA+    + +R+GL   L + +
Sbjct: 8   LINGVLAAGIYALVASGLALAVGVVGIVNFAHGEFLMIGAFVSYWMFTRFGLDPLLSLGI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A++    G       ++       +  ++++      L     +  G     V+     
Sbjct: 68  AALVVFLVGAASYYGLIRPVLAAPELNQMLLTFGLSVALQNVALVVFGAQTRVVSPP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                    +      + + + +  +   L    +   +  +L RT +  A R +  N+ 
Sbjct: 125 --------YQGSTISLAGLSFGVPQFAAFLLSLGILGGLYGFLGRTRMGFAVRAVAQNRI 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L        L AF +S+A  G+AG   +            F+  +   +IV++ G+
Sbjct: 177 APGLLGIEKEQVYLLAFGLSAAIAGVAGVMLSVLLYA--SPTVGFAYTLKAFAIVVMAGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L  +  A  +L                 +            T       LV+  +   
Sbjct: 235 GNLRGVIPAAMVLALAEAFVSTYLPGGGGWVEAVFFLVIFVALTWRSWQDVLVMRWK-RG 293

Query: 339 LLRLRTP 345
           L   + P
Sbjct: 294 LAGRKAP 300


>gi|218296530|ref|ZP_03497258.1| inner-membrane translocator [Thermus aquaticus Y51MC23]
 gi|218243072|gb|EED09604.1| inner-membrane translocator [Thermus aquaticus Y51MC23]
          Length = 198

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 70/180 (38%), Gaps = 2/180 (1%)

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                   F + + F  +  F YYV L    + A     L RT    A   +RDN +A  
Sbjct: 1   MDMPRASLFGYEAGFRNHFHFWYYVSLATLVVLALFWRNLLRTRYGRALIAVRDNDRAAD 60

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           ++       KL AFA+ + + G+AG  +A     +  + + F+ ++  +++ I+GG+ +L
Sbjct: 61  AMGMDPGRTKLFAFALGAFYAGVAGVLYAYLSRAVVIEDYVFAHSVKYLAMAIVGGLGTL 120

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDC--SFNMRHTTLMVIALFLVILMRSHSL 339
                 T  L+ +      ++ +              +     +  + + L ++     L
Sbjct: 121 VGSFLGTGFLVLLDVNMEALSNFIKGLGFSVAGVDVASALRPLVFGLVILLFLMFEPRGL 180


>gi|163746372|ref|ZP_02153730.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Oceanibulbus indolifex HEL-45]
 gi|161380257|gb|EDQ04668.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Oceanibulbus indolifex HEL-45]
          Length = 336

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/334 (9%), Positives = 88/334 (26%), Gaps = 19/334 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L      S   +           + A G+++V G L   +       A+G  + +++  
Sbjct: 3   LLNAFIALSNYVLIPGIAYGSQLALGALGVTLVYGILRFSNFAHGDTMAMGTMATILVTW 62

Query: 87  RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            +              L +P     +    +       KF  +  A   +++        
Sbjct: 63  LFQSMGLSLGFLPTALLALPFGIAFAILLLLGTDKVVYKFYREQKAKPVILVIVSLGVTF 122

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I                             +        + ++      ++    + A +
Sbjct: 123 IYNGITRFIIGADDQNFLDGQRFIMSARDFKQMTGLDEGLAFKTTQGITIVTAIIVVALL 182

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L +T    + R   DN+              +  + + +A   +AG  +   +    
Sbjct: 183 FWFLNKTRAGKSMRAYSDNEDLALLSGINPERVVMITWMIVAALATIAGTLYGLDKSF-- 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309
                F   + + +  I+GG+ S         ++             +   +        
Sbjct: 241 KPFTYFQLLLPIFAAAIVGGLGSPVGAIAGGFVIAFSEVTITYAWKKVLGYVMPEGMEPD 300

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                        +  + L +V+L++   L + +
Sbjct: 301 GLVQLMSTDYKFAVSFVILLIVLLIKPTGLFKGK 334


>gi|153833296|ref|ZP_01985963.1| ribose transport system permease protein RbsC [Vibrio harveyi HY01]
 gi|156977358|ref|YP_001448264.1| ribose ABC transporter permease protein [Vibrio harveyi ATCC
           BAA-1116]
 gi|148870432|gb|EDL69353.1| ribose transport system permease protein RbsC [Vibrio harveyi HY01]
 gi|156528952|gb|ABU74037.1| hypothetical protein VIBHAR_06144 [Vibrio harveyi ATCC BAA-1116]
          Length = 327

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALIFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + +     +  +       +    +   + +                + F  
Sbjct: 88  LCGAFAASMIALEVPVLIAVPTALFAGAALGAISGIIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVIVFAAAWYL 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGMLAALAGIIVTSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLV 322


>gi|317046496|ref|YP_004114144.1| inner-membrane translocator [Pantoea sp. At-9b]
 gi|316948113|gb|ADU67588.1| inner-membrane translocator [Pantoea sp. At-9b]
          Length = 308

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDTTWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
                    +I+                     +   I  I           +    R  
Sbjct: 72  MIAAGFVMAIIISSAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + +                      + +       ++ +++R + +  A R   ++ 
Sbjct: 132 ALPSLITGQWTLGESNGFAATLSTMQLMIWVVTFIAMLALTVFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +AG         I+     F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGSIN-PFIGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L     L        +  ++ F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|148557964|ref|YP_001257383.1| branched-chain amino acid ABC transporter permease [Brucella ovis
           ATCC 25840]
 gi|148369249|gb|ABQ62121.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ovis ATCC 25840]
          Length = 294

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/294 (11%), Positives = 91/294 (30%), Gaps = 27/294 (9%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107
           + + A GL+++ G + +++         G +   ++ ++ GL  +  + +    +     
Sbjct: 18  FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 77

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +   L            A +  +      +I    +  G                  +  
Sbjct: 78  LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 126

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                    +       ++ LG   L  ++ L+L+ +    A R +  ++ A   +   +
Sbjct: 127 LRTPIEIGPLCVLTGQVFIFLGAIVLVVALQLFLKNSQTGRAIRAVAQHRSAAELMGVNV 186

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
               +  F + +A +G+A    A      S     F        +V+LGG+ S+      
Sbjct: 187 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 244

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             I+  +  +                   +     ++     L+++++   L  
Sbjct: 245 ALIIGVIDTMSGYYIG-------------SDLREAVVFGIFLLILILKPSGLFG 285


>gi|91224729|ref|ZP_01259989.1| ribose ABC transporter permease protein [Vibrio alginolyticus
           12G01]
 gi|91190275|gb|EAS76544.1| ribose ABC transporter permease protein [Vibrio alginolyticus
           12G01]
          Length = 327

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALIFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + +     +  +       +    +   + +                + F  
Sbjct: 88  LCGAFAASMIALEVPVLVAVPTALVAGAALGAISGIIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 136 TLVTMTLLRGVTMVYTEGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVVVFAAAWYL 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGMLAALAGIIVTSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLV 322


>gi|325675319|ref|ZP_08155003.1| inner-membrane translocator [Rhodococcus equi ATCC 33707]
 gi|325553290|gb|EGD22968.1| inner-membrane translocator [Rhodococcus equi ATCC 33707]
          Length = 766

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 110/286 (38%), Gaps = 10/286 (3%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            +A    LL+ +++      +   +     + + + A  L+++ G  G ++L  V   AI
Sbjct: 313 AVAWGAALLVIVYMIRLLMVESAITTLTLGMSFAIIALSLTLLTGYAGEMNLAVVSFGAI 372

Query: 77  GAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
                   G+             + +  +++   G ++ LP+L+ RG YLA+AT+     
Sbjct: 373 STIVAYHFGTSGSGLATRLTLWGLIIGTLVAAVIGGLVALPALRLRGLYLALATMAFGVF 432

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             N++++            +    + L T     I   +     +  +      +  +  
Sbjct: 433 LSNMVLR------DTTEHELFGVKFSLFTGGSLSIPPLKVGPLDLSNQTAFLMTVTAIFT 486

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           + A  ++ LR +        ++D+  A   L   ++  KLS F +S+   G+ G   +++
Sbjct: 487 ILAIGVVALRNSGYGRRLAAMKDSPAAAAMLGQNLVKLKLSVFMLSAGIAGLGGILMSSA 546

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
              +S + F    ++ V+ + ++ G+  ++       +      + 
Sbjct: 547 IGAVSNENFSIMISLTVLMLTVVAGIGYVTGALFGGLLAGVGFAVI 592



 Score = 70.3 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 84/292 (28%), Gaps = 8/292 (2%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +     +   +Y + A GL +   + G+ +        +GA+ Y      + L   L +
Sbjct: 6   TFTILGLVLGSVYAIAASGLVLTYNTSGIFNFAHGAQAMLGAFLYWQFRYGWDLPTPLAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++  ++G        P +      L +  L  +     I++    +  G +  +     
Sbjct: 66  LLTIGVAG--------PLMGLLLYALIMRGLRDTAEVTKIVVTVSILLGGVSLSHWFWHP 117

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
               T         RF        +     L+    ++  +     RT +  + R + D+
Sbjct: 118 EEPRTVKMFFGDESRFSFFGATVHMHEVICLVAAVLIAVGLRFLFTRTRLGVSMRGVVDD 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                            ++A+ S    +AG                    I   +  + G
Sbjct: 178 PDLLRLNGHNPERIAAFSWALGSTLAVVAGILITPISGGTLEANLLTLLVIDAFAAAMFG 237

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
            + S+ +      +L        G     +        S  M    +++I L
Sbjct: 238 RLRSIPRTFVGAIVLGLAGTYVLGYFPSEWTWTSNLRVSLPMIALFVVLIVL 289


>gi|259416265|ref|ZP_05740185.1| inner-membrane translocator [Silicibacter sp. TrichCH4B]
 gi|259347704|gb|EEW59481.1| inner-membrane translocator [Silicibacter sp. TrichCH4B]
          Length = 336

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/334 (9%), Positives = 89/334 (26%), Gaps = 19/334 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           FL      S   +           + A G++++ G L   +       A G    ++   
Sbjct: 3   FLNAFVALSNFVLIPGIAYGSQLALGALGVTLIYGILRFSNFAHGDTMAFGTMVVILFTW 62

Query: 87  RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            +              L +P+  + + A  ++      KF  +  A   + +      + 
Sbjct: 63  LFQSWGISAGPLPTALLALPIGIVATMALVLVTDKAVFKFYREQKAKPVVFVMVSLGVMF 122

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +    +                        +        +  +      ++    + A +
Sbjct: 123 MMNGLVRFIIGPGDQRFADGERFIIKAGTFKKMTGLDEGLAIKTSQGITVVTAIIVVALL 182

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L +T    + R   DN+              +  + + +A   +AG  +   +    
Sbjct: 183 FWFLNKTRTGKSMRAYSDNEDLALLSGINPERVVMITWLIVAALATIAGTLYGLDKSF-- 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF- 316
                F   + + +  I+GG+ S         ++     +           +L       
Sbjct: 241 KPFTYFQLLLPIFAAAIVGGLGSPLGAIAGGFVIAMSEVMITYAWKKVGGYILPESLEPE 300

Query: 317 -------NMRHTTLMVIALFLVILMRSHSLLRLR 343
                        +    L +V+L +   + + +
Sbjct: 301 GLAQLLSTDYKFAVSFAILVVVLLFKPTGIFKGK 334


>gi|217967322|ref|YP_002352828.1| inner-membrane translocator [Dictyoglomus turgidum DSM 6724]
 gi|217336421|gb|ACK42214.1| inner-membrane translocator [Dictyoglomus turgidum DSM 6724]
          Length = 293

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 89/289 (30%), Gaps = 12/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A G ++V G L L++      Y +GA+        + +     + V
Sbjct: 9   IINGISLGSIYALIALGYTMVYGILRLINFAHGDIYMLGAFIGFFALGSWNMPFAFGLIV 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++   G+++   + K   +   I+ LI +      L     +  G            
Sbjct: 69  AMLLTAVIGILVEKLAYKPLRNAPRISLLITAIGVSFFLENIMVLLVGAT---------- 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    +    +I       +L     L   +   + +T I  A R +  +++
Sbjct: 119 -PRAFPQKIPTEIYFIGELIITNKQIIILSVSILLMLFLQFIVNKTKIGRAMRAVSQDKE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   I       FA+ SA     G       ++I P M      +      +LGG+
Sbjct: 178 MAQMLGVNIDNVISFTFALGSALAAAGGVLVGMYFNKIEPYM-GVMPGLKAFVAAVLGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +        I+     L  G         + F     +       I 
Sbjct: 237 GIIPGAMLGGFIMGIAEVLVSGFISSTIRDAVAFVILIIILLIKPTGIL 285


>gi|254439478|ref|ZP_05052972.1| amino acid or sugar ABC transport system, permease protein,
           putative [Octadecabacter antarcticus 307]
 gi|198254924|gb|EDY79238.1| amino acid or sugar ABC transport system, permease protein,
           putative [Octadecabacter antarcticus 307]
          Length = 335

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 95/314 (30%), Gaps = 17/314 (5%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
              S  Y        +++   A GL IV G  G+LS      + +  Y+Y ++    G +
Sbjct: 22  PAFSDPYTIGNAAYFMVWTFMAMGLGIVWGYCGVLSFGQTAFFGLAGYAYGVVSINLGAA 81

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L      +     G    L         +    + +  +   ++++            
Sbjct: 82  FGLTWLALVLSVTIGGAFALLIGYFMFYGRIKGVFIGIVTLSVTLVLETFMAQTAGPNWR 141

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEI---FMYYVLLGMCFLSASIILWLRRTAISN 208
           + D        +  +           I       +Y+VLL M  +    +  L      N
Sbjct: 142 IGDARLNGFNGMSGMPPLTVPWPGGDIVLYSGTALYFVLLVMVVVCYLGLRMLLNAPFGN 201

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               IR+N +    L   I   +  AF +  A   ++G  + A    I+P     +   +
Sbjct: 202 VLVAIRENPERAEMLGYDIRLYQTLAFGLGGALAALSGTLYTAWGQYITPSSMGLTAAAL 261

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
            I  V +GG   ++     + ++I   +                    +     +M   L
Sbjct: 262 PIVWVAVGGRRDITATLLGSILVIAGFQTLTIYG--------------SQYALIVMGALL 307

Query: 329 FLVILMRSHSLLRL 342
              +L+    L+  
Sbjct: 308 VFTVLVTPDGLIST 321


>gi|170742872|ref|YP_001771527.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168197146|gb|ACA19093.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 291

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 90/305 (29%), Gaps = 20/305 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G +++ G  G+L+L+        A       S YGL  +     
Sbjct: 7   LIDGFAISALYALGATGFTLIFGVSGVLNLSHGALMVTAAVVAWAASSEYGLGAYAGAAT 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +     +      +K         +  +    + I I    +  G         L+ 
Sbjct: 67  GVAVCTLLTLATYGVVVKP-----IDRSKAIPAEEKEIFILTGTLLWGIMIQEFIAYLFT 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I       + V       +  L      A + + + RT           N +
Sbjct: 122 SNAKTVMPIVEGVVTIAGVRTPWNQIFTALVCWGTIALLWVLVNRTRTGKVVLAASMNPR 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +    ++ +A+     G+AG          S  +   +      SIV+LGG+
Sbjct: 182 GVTLLGFELSKIYVAIWAIYGVLAGIAGVLLGQFLGVSSYSVGPLT--ASAFSIVVLGGL 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+S    A  ++  +  +   +                   T   ++ L  V+ +R   
Sbjct: 240 GSVSGSLIAAYVVGYLETITAYLIS-------------PAYRTIPALLLLVAVMYVRPQG 286

Query: 339 LLRLR 343
           LL  R
Sbjct: 287 LLGRR 291


>gi|326796935|ref|YP_004314755.1| ABC-type transporter integral membrane subunit [Marinomonas
           mediterranea MMB-1]
 gi|326547699|gb|ADZ92919.1| ABC-type transporter, integral membrane subunit [Marinomonas
           mediterranea MMB-1]
          Length = 334

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 110/301 (36%), Gaps = 19/301 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V   +++ L L    +   I      ++IY++ A   +++ G  GL+S+     + +GAY
Sbjct: 22  VAALIVVCLALLPFYADGQIIDKVTMLMIYIVLAMMWNLLAGFAGLVSVGQQAFFGLGAY 81

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
            + I      ++ +    + ++       ++    L  +G   AIA  +++E+ +  ++ 
Sbjct: 82  -FAIRLVMADMNPYGAFIIGSLAVAVIAYLISFFVLNLKGGEFAIAMWVIAEVIRIFVMF 140

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              I                                  +     ++  L +  + +  +L
Sbjct: 141 DPIIQG-----------------ETGTSLLAMNAYEPELRRSLNFWFSLSVFVVFSGGVL 183

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF-AASRDRISP 258
            L ++ +  A + IRD+++A  S+   +   K   F +++     AG  + + +      
Sbjct: 184 VLLKSRLGAAAQAIRDDEEAARSVGIKVESTKRIIFVIAAVGCAFAGCIWLSTAITFQPR 243

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             F     + ++ +V++GG+ +         +   + E+      +Y   L      F +
Sbjct: 244 TNFGVQWTVFMLFMVLVGGLGTFEGPIIGAILFFILQEVFGDFGAWYLAGLGAVAVLFAL 303

Query: 319 R 319
            
Sbjct: 304 Y 304


>gi|256059392|ref|ZP_05449594.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella neotomae 5K33]
 gi|261323353|ref|ZP_05962550.1| branched-chain amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261299333|gb|EEY02830.1| branched-chain amino acid ABC transporter [Brucella neotomae 5K33]
          Length = 294

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/294 (11%), Positives = 90/294 (30%), Gaps = 27/294 (9%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107
           + + A GL+++ G + +++         G +   ++ ++ GL  +  + +    +     
Sbjct: 18  FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 77

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +   L            A +  +      +I    +  G                  +  
Sbjct: 78  LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 126

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                    +       ++ LG   L  ++ L+L+ +    A R    ++ A   +   +
Sbjct: 127 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGRAIRAAAQHRSAAELMGVNV 186

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
               +  F + +A +G+A    A      S     F        +V+LGG+ S+      
Sbjct: 187 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 244

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             I+  +  +                   +     ++     L+++++   L  
Sbjct: 245 ALIIGVIDTMSGYYIG-------------SDLREAVVFGIFLLILILKPSGLFG 285


>gi|17988445|ref|NP_541078.1| high-affinity branched-chain amino acid transport system permease
           protein LIVM [Brucella melitensis bv. 1 str. 16M]
 gi|225686936|ref|YP_002734908.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella melitensis ATCC 23457]
 gi|256015954|ref|YP_003105963.1| high-affinity branched-chain amino acid transport system permease
           protein [Brucella microti CCM 4915]
 gi|256042922|ref|ZP_05445868.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella melitensis bv. 1 str. Rev.1]
 gi|256059752|ref|ZP_05449947.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella neotomae 5K33]
 gi|256261925|ref|ZP_05464457.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2
           str. 63/9]
 gi|260564157|ref|ZP_05834642.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1
           str. 16M]
 gi|261323730|ref|ZP_05962927.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|265989356|ref|ZP_06101913.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|306841192|ref|ZP_07473908.1| branched-chain amino acid transport system permease [Brucella sp.
           BO2]
 gi|306845351|ref|ZP_07477926.1| branched-chain amino acid transport system permease [Brucella sp.
           BO1]
 gi|17984230|gb|AAL53342.1| high-affinity branched-chain amino acid transport system permease
           protein livm [Brucella melitensis bv. 1 str. 16M]
 gi|225643041|gb|ACO02954.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella melitensis ATCC 23457]
 gi|255998614|gb|ACU50301.1| high-affinity branched-chain amino acid transport system permease
           protein [Brucella microti CCM 4915]
 gi|260151800|gb|EEW86893.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1
           str. 16M]
 gi|261299710|gb|EEY03207.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|263000025|gb|EEZ12715.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263091404|gb|EEZ15940.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2
           str. 63/9]
 gi|306274267|gb|EFM56079.1| branched-chain amino acid transport system permease [Brucella sp.
           BO1]
 gi|306288818|gb|EFM60136.1| branched-chain amino acid transport system permease [Brucella sp.
           BO2]
 gi|326411365|gb|ADZ68429.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella melitensis M28]
 gi|326554655|gb|ADZ89294.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella melitensis M5-90]
          Length = 315

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 106/324 (32%), Gaps = 38/324 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             +     +        +   +  +    LI    A   +I+ G  G  S    + Y +G
Sbjct: 6   ALLAIIAAVLALGAPLFASPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGLG 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   I   ++ L  +    +  + +    M++GLP L+ +G Y AIATL + ++   I 
Sbjct: 66  AYGAGIAMVQFNLPFFAGAAIGIVAAVVFAMLIGLPILRLKGHYFAIATLALPQVMAAIT 125

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                                    V             +  + F Y   L +  ++  +
Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L R+        IR+N++   ++       K+ A  +S AF  MAGA  A     + 
Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMGINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222

Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P+       N+ +I + + GG  ++         L  V                    ++
Sbjct: 223 PEAAYQVQLNVQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLST--------------AY 268

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
                    I + + +++    L 
Sbjct: 269 TDVAGMFFGIVIVVAVVLMPRGLA 292


>gi|15805312|ref|NP_294004.1| branched-chain amino acid ABC transporter permease [Deinococcus
           radiodurans R1]
 gi|6457953|gb|AAF09863.1|AE001889_9 branched-chain amino acid ABC transporter, permease protein
           [Deinococcus radiodurans R1]
          Length = 285

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 50/304 (16%), Positives = 93/304 (30%), Gaps = 28/304 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GL++V G + + +      Y +GAY      S  GL     + +
Sbjct: 8   LFNALALGGVYALVALGLTLVYGVMKIPNFAHGGLYMLGAYLSYAGISSLGLGYVPALLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           SA++      +M         +   +  +I +      L     +  G     VA+ +  
Sbjct: 68  SAVVVALLAALMERVIFFPLRNAPHVQPMIAALGVLFFLEAGVQLIWGADFKQVAEPIP- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V        VL+        +  +LRRT        +  N++
Sbjct: 127 -----------GILNIGGVTITWQRLIVLVASVVAMLGLNFFLRRTLTGATIEAMAQNRE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        +  FA+S A   +  +  A               N+ V +I+ILGGM
Sbjct: 176 GARLVGINTGRVGMLTFAISGALAAIGASLIAPIVSV--TPAMGEIMNLKVFAIIILGGM 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L         +N                    +    L +V+ +R   
Sbjct: 234 GSIPGAIVGAFLLAFAEVFGGYINL--------------DFAEVIGFAVLVVVLAIRPQG 279

Query: 339 LLRL 342
           L R 
Sbjct: 280 LFRR 283


>gi|317121419|ref|YP_004101422.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Thermaerobacter marianensis DSM 12885]
 gi|315591399|gb|ADU50695.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Thermaerobacter marianensis DSM 12885]
          Length = 299

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 99/305 (32%), Gaps = 16/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L +++      +A+GAY  +       L        
Sbjct: 6   VVNGLTVGSIYALVALGYTMVFGVLKMINFAHGDLFALGAYLGLTFLIWGALGQGAGGLA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G    +    +                 +    ++    ++       +     F
Sbjct: 66  ALLLIGLLAALCVGLAGVLVERVAYRPLRGAGRL--PAVVSALGVSVFIQNGIMLLWGAF 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  ++    +    +   +    +L G   L  ++ L+++ T +  A R I  + +
Sbjct: 124 PVAFPHGMVPDVSWSVGGITISLMRLVILGGSLVLMLALYLFIQYTKLGAAMRAIAVDHE 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + +A  G+AG        +++  M  +   +   +  ILGG+
Sbjct: 184 TARLMGIDVDRLIQLVFLLGAALGGLAGVMVGLYYGQLNFTM-GWLYGLKAFTAAILGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L     L  G     +   + F               L L++L+R   
Sbjct: 243 GNIPGAMVGGLVLGLAETLAAGYVAGEWKDAVAF-------------FILILILLVRPTG 289

Query: 339 LLRLR 343
           LL  R
Sbjct: 290 LLGER 294


>gi|300907398|ref|ZP_07125045.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 84-1]
 gi|300400813|gb|EFJ84351.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 84-1]
          Length = 297

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 1   MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 60

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 61  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 117

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 118 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTVFIRYSRMGRAC 173

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 174 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 232

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 233 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 279

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 280 VLLVMPTGILGR 291


>gi|289450392|ref|YP_003475426.1| putative high-affinity branched-chain amino acid ABC transporter
           permease LivH [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184939|gb|ADC91364.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Clostridiales genomosp. BVAB3
           str. UPII9-5]
          Length = 291

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 101/305 (33%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     + Y + A G S+V G L L++ +    YA GA + + L +     +  ++  
Sbjct: 6   IFNGLTLGMTYALIAVGYSLVFGILRLVNFSHGSVYAFGANAILFLLATNIGIVPAILIG 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +      ++        R    A    +++ I  + +I    I    +       L+ 
Sbjct: 66  TLITGILGVIVDKTSLEPLRKRKAANIASLITTIGISGIITNLLIAFAGSQKKPFPVLFP 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                          +  +       Y+      L   ++  +  T I  A R    N K
Sbjct: 126 TEY----------LTAGGIQVTYVQLYMFCISLALMLLLVGVVHFTRIGLAMRACEQNIK 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   + F     F +      +AGA  ++    + P+M  ++  +   S  +LGG+
Sbjct: 176 AAGLMGINVNFVISFTFFLGGVSAAIAGALVSSYYGMVYPNM-GYTAGLKAFSAAVLGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        I+     +        F   + F             I L +V++++ + 
Sbjct: 235 GSLPGSLLGGLIVGVSESVAATALGSEFRDSMAF-------------IILIVVLVIKPNG 281

Query: 339 LLRLR 343
               +
Sbjct: 282 FFGRK 286


>gi|115359193|ref|YP_776331.1| inner-membrane translocator [Burkholderia ambifaria AMMD]
 gi|115284481|gb|ABI89997.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia ambifaria AMMD]
          Length = 345

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/326 (12%), Positives = 97/326 (29%), Gaps = 18/326 (5%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           + F     +   +     V+                 + S+     +  + A   + V+ 
Sbjct: 25  ARFFNPAARQKLLAFASLVLLIAFFSFASPNFLDVDNLVSILQATAVNGVLAVACTYVII 84

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           + G + L+        A    ++ +++G+ + L I  +       G + G    K +   
Sbjct: 85  TSG-IDLSVGTLMTFCAVMAGVVLTKWGMPLPLGILAALGFGALSGSVSGFVIAKMKVPP 143

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                           +    +  G + +    R  +   T              +I  +
Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQDSLIGSLIPAL 191

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +   +L +  ++    + L RT        +  N++A       +   K++ +  S A 
Sbjct: 192 PIPNAVLILFLVAIGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAV 251

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+AG   A+  +   P + +  E   + ++VI      GG  S+        I+  +  
Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTN 311

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               M+       +       +    
Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYV 337


>gi|330879669|gb|EGH13818.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 305

 Score = 70.7 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 93/303 (30%), Gaps = 17/303 (5%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +      + ++ A GL+I+ G +G++++       +GAY+  +L +     +  + P   
Sbjct: 17  NGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTVGAYTTYVLSTLVQTYMPSMQPYYF 76

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
             + A   ++             + + +       +L  W      +  +        + 
Sbjct: 77  FFAIALSFVVAGSIGWVVER--VMISRLYHRPLDTLLATWGLSLVMQQALRSIFGAREVS 134

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                 +      S  +       +V+     L+  I L L RT      R    N+   
Sbjct: 135 ANPPEWLMGAVSLSDTIEIPRNGLFVMALTVLLTGGIFLMLYRTRWGLHVRATVQNRVMS 194

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++           FA+     G+AGA  A +    +         +    +V+ GG  S
Sbjct: 195 RAVGINTREVDRMTFALGCGVAGVAGA--AFTTIGSTGPTAGSLYIVDTFLVVVFGGAQS 252

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L     +   +     +           +L                A+ L++LMR   L 
Sbjct: 253 LLGTIASAFTIAQTQSISEFFMSGSMAKVLTLS-------------AVILILLMRPQGLF 299

Query: 341 RLR 343
             +
Sbjct: 300 SSK 302


>gi|326402538|ref|YP_004282619.1| branched-chain amino acid ABC transporter permease [Acidiphilium
           multivorum AIU301]
 gi|325049399|dbj|BAJ79737.1| branched-chain amino acid ABC transporter permease protein
           [Acidiphilium multivorum AIU301]
          Length = 300

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 93/305 (30%), Gaps = 17/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++        +GA+  +   +  G +      +
Sbjct: 8   VFNGLTVGGIYALIALGYTMVYGVMRLINFAHGDLCILGAFIGLTFLTSLGGAGHPGAAL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +   A  +++ +  +                      +    +      +  + ++  
Sbjct: 68  LILAFVAAIVVVAVAGVVLELAAYRPLRKADRLAAVVSALGASLLIENGIMLIWSPQVSV 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             + +     +     +          +++    L A++ L++  T    A R    +Q 
Sbjct: 128 FPSGLLPTTTYH---IAGASISFVQVMIIIVSFLLMAALYLFVNHTRFGTAIRAAAIDQD 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +     S F +  A   + G F       +   M  ++  +      ILGG+
Sbjct: 185 AARLMGINVNRVIASVFIIGPALGAVGGLFIGVYYREVYFTM-GWTYGLYAFIAAILGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L        G     +   + F               L  ++L+R   
Sbjct: 244 GNIPGAMLGGILLGLFNAFAAGYISSSWQDAITF-------------ALLIGILLVRPSG 290

Query: 339 LLRLR 343
           LL  R
Sbjct: 291 LLGER 295


>gi|302024223|ref|ZP_07249434.1| branched-chain amino acid transport system permease protein
           [Streptococcus suis 05HAS68]
          Length = 253

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 65/277 (23%), Positives = 117/277 (42%), Gaps = 41/277 (14%)

Query: 72  IAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
              AIGA++YV +        I   + V  +ISGA  +++G+P+L+ +GDYLAIATL ++
Sbjct: 7   AFCAIGAHAYVPMENDANLWWICYRLIVGMLISGAVALLVGIPTLRLKGDYLAIATLGVA 66

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           EI + ++I    +TNG AGI                                   ++   
Sbjct: 67  EIIRILIINGGSVTNGAAGIMSIPLFTSWP-------------------------LVYIF 101

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++  + +   R+ +  A  ++R+++ A  S+     F K+SAF   +    +AG   A
Sbjct: 102 VIITTLVTVNFLRSPMGRATISVREDEIAAESVGVNPTFVKVSAFVFGAMTAAIAGGLHA 161

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                I P  F F  ++ V+ I++LGG+ S++    A  +L  +                
Sbjct: 162 GYVGTIVPKDFAFMTSVNVLIIIVLGGLGSITGTFVAAIVLGILNVFLKSY--------- 212

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                 +     +  +AL L+++ R   LL  +  S 
Sbjct: 213 ------SDISMIIYSLALILLMIFRPGGLLGTKEFSV 243


>gi|149915788|ref|ZP_01904313.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter sp. AzwK-3b]
 gi|149810370|gb|EDM70215.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter sp. AzwK-3b]
          Length = 398

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/367 (13%), Positives = 105/367 (28%), Gaps = 36/367 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +      L  +   +L    G       +  +    L   + A  + +V G  G+LSL  
Sbjct: 25  WFLGALGLFTLSVSVLAEGFGLPILSTSMVKVLGMTLCLCLIAVAMDVVWGYCGILSLGH 84

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPV-----------------SAMISGACGMIMGLP 113
              + +G Y+  +          ++                    + +        +   
Sbjct: 85  FAFFGLGGYAIGMWLMYARTEGIVIDSFENAPIPPTETEITDAIATQIFGVVGSNELPAL 144

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR-- 171
            +      L +A +++      ++  W    +   G+Y++     +   +   +      
Sbjct: 145 WVFAHSLPLQLAMVVLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLYLFQNDTG 204

Query: 172 ----------------FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                    ++ ++       L   I  WL      +  R IRD
Sbjct: 205 LRGNNGLSGLQNIPGLLHVPQSTLALWFFWASAFALGLGYVIFAWLVSGKFGSVIRGIRD 264

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N+     L   +   KL  F +++   G+AGA +      I+P       +I +   V +
Sbjct: 265 NEARVRFLGYHVEHYKLVIFTLTAIVSGLAGALYYPQAGIINPAEIAPIASIYLAVWVAI 324

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG   L       A++        G        L  +  ++      L+ +    V L  
Sbjct: 325 GGRGRLYGAVIGAAVVSLASSWFTG-GGAPDIDLGFYVINWTDWWLVLLGLGFVAVTLFF 383

Query: 336 SHSLLRL 342
              +  L
Sbjct: 384 PRGIGGL 390


>gi|256375808|ref|YP_003099468.1| urea ABC transporter permease [Actinosynnema mirum DSM 43827]
 gi|255920111|gb|ACU35622.1| urea ABC transporter, permease protein UrtB [Actinosynnema mirum
           DSM 43827]
          Length = 292

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 87/291 (29%), Gaps = 25/291 (8%)

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
           +   G +G++++        GAY+  ++    G S +LL   +A +      +    SL 
Sbjct: 26  TFTFGQMGVVNMAHGEFVMAGAYTAYLVQGALGGSAFLLSLPAAFVVAGLLGLALEASLL 85

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
            R     + TL+++     +L +      G   + V                        
Sbjct: 86  RRFHGRPLDTLLLTWGVSLVLQQVARDVFGAPNVQVVSPP----------WLVGGVELLG 135

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
           V       +++      +  + L+L R+      R +  N++                F 
Sbjct: 136 VRLPHNRVFIIGLAALCAVGVWLYLARSPQGRRVRAVVQNRELAACSGVATGRVDRLTFL 195

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           + S   G+AG   A +           +  +    +V+ GG+  L     A   L  +  
Sbjct: 196 LGSGLAGVAGV--ALTLVGPVGPTLGGAYLVDAFLVVVAGGLGQLRGAVLAAVALGFLNS 253

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                                     L++ A+ + +  R   +  LR  S 
Sbjct: 254 FLELYTDASLAKA-------------LVLAAVIVFLQFRPQGMFVLRGRSL 291


>gi|301384779|ref|ZP_07233197.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302060727|ref|ZP_07252268.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato K40]
 gi|302130815|ref|ZP_07256805.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
          Length = 305

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 93/303 (30%), Gaps = 17/303 (5%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +      + ++ A GL+I+ G +G++++       +GAY+  +L +     +  + P   
Sbjct: 17  NGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTVGAYTTYVLSTLVQTYMPSMQPYYF 76

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
             + A   ++             + + +       +L  W      +  +        + 
Sbjct: 77  FFAIALSFVVAGSIGWVVER--VMISRLYHRPLDTLLATWGLSLVMQQALRSIFGAREVS 134

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                 +      S  +       +V+     L+  I L L RT      R    N+   
Sbjct: 135 ANPPEWLMGAVSLSDTIEIPRNGLFVMALTVLLTCGIFLMLYRTRWGLHVRATVQNRVMS 194

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++           FA+     G+AGA  A +    +         +    +V+ GG  S
Sbjct: 195 RAVGINTREVDRMTFALGCGVAGVAGA--AFTTIGSTGPTAGSLYIVDTFLVVVFGGAQS 252

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L     +   +     +           +L                A+ L++LMR   L 
Sbjct: 253 LLGTIASAFTIAQTQSIAEFFMSGSMAKVLTLS-------------AVILILLMRPQGLF 299

Query: 341 RLR 343
             +
Sbjct: 300 SSK 302


>gi|254477775|ref|ZP_05091161.1| inner-membrane translocator [Ruegeria sp. R11]
 gi|214032018|gb|EEB72853.1| inner-membrane translocator [Ruegeria sp. R11]
          Length = 353

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 89/313 (28%), Gaps = 18/313 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +   +   L      S   +  +  Q+ I  + A   S+V+ + G + L+     
Sbjct: 45  LIVLVLSVIVFGLLLGSKFFSPFALTLILQQVGIVGIVACAQSLVILTAG-IDLSVGAIM 103

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +        RYGL   + +    +    CG I G    + +                
Sbjct: 104 VLSSVVMGQFTFRYGLPPEIAVVCGLICGTFCGFINGWLVARMKLPPFI----------- 152

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    I      +Y A+      T          F     +      Y ++ M  L 
Sbjct: 153 -VTLGMWQIVLATNFLYSANETIRSQTIAAEAPLLQLFGEKIKLGGAVFTYGVIFMVLLV 211

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   LR TA       + D+  A       +    +S + +S      AG        
Sbjct: 212 ILLAYVLRHTAWGRHVYAVGDDPDAAELSGVKVNRVLISVYMLSGLICAFAGWAMIGRIG 271

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   + +    + ++VI      GG  S+        I+         +      + 
Sbjct: 272 SVSPTSGQLANIESITAVVIGGISLFGGRGSILGTFFGALIVGVFTLGLRLLGADAQWTY 331

Query: 310 LKFDCSFNMRHTT 322
           L            
Sbjct: 332 LLIGLLIIAAVAV 344


>gi|170751879|ref|YP_001758139.1| urea ABC transporter, permease protein UrtB [Methylobacterium
           radiotolerans JCM 2831]
 gi|170658401|gb|ACB27456.1| urea ABC transporter, permease protein UrtB [Methylobacterium
           radiotolerans JCM 2831]
          Length = 308

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 95/301 (31%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   +Y++ A GL+I+ G +G++++       +GAY   +  + +   +  L P+   I
Sbjct: 22  LILFSVYLLMALGLAIIFGQMGVINMAHGEFMILGAYVTYLCSTFFQTYLPALFPIYFFI 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     +            L     +       +L  W      +           +G  
Sbjct: 82  AMGLAFLASGALGMLVEWGL--IRFLYKRPLDTLLATWGLSLILQQAYRSIFGAREVGVE 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           + S +      +  +   I   +V+     ++ S+ L + R+      R +  N+    +
Sbjct: 140 LPSWLIGSVQVTDTIEIPINGLFVMAVTILITVSVALLIFRSRFGQQVRAVMSNRAMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           F +     G+AG+ F       +         +    IV+ GG  SL 
Sbjct: 200 VGIDTEKVDRYTFGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLIVVFGGAASLL 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               + ++A+  ++++R   L  L
Sbjct: 258 GTIASAFSISQTQSTLEFFLSGSMAK-------------VITLLAVVGILMLRPQGLFTL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|146313492|ref|YP_001178566.1| branched-chain amino acid transporter permease subunit LivH
           [Enterobacter sp. 638]
 gi|145320368|gb|ABP62515.1| L-isoleucine ABC transporter membrane protein / L-valine ABC
           transporter membrane protein / L-leucine ABC transporter
           membrane protein [Enterobacter sp. 638]
          Length = 308

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 96/312 (30%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDSSWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +       +  LI +      L  +  +T G    
Sbjct: 72  LVGAGFVGAIVIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWIVGASENFSASITTMQLVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L  
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLIG 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|148264184|ref|YP_001230890.1| inner-membrane translocator [Geobacter uraniireducens Rf4]
 gi|146397684|gb|ABQ26317.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Geobacter uraniireducens Rf4]
          Length = 294

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 92/290 (31%), Gaps = 13/290 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ S      IY +   G +I+  S G+++        +G        +   L ++  I
Sbjct: 9   QYVLSGLSTGAIYALIGLGFAIIYNSTGIINFAQGEFVMLGGMLSFFFLTTLKLPLFASI 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++   S A G+     +++   +   ++ +I++      +     +  GK         
Sbjct: 69  PLAVFTSTAAGIAFERLAIRPLKNATPMSLVIITIGASIFIRGLAMLLWGKDTHA----- 123

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + S         +         ++      +  +  L+   T    A R    N
Sbjct: 124 ------LPSFSGNDPISVAGATILPQHIWIFAITLLVIIANKLFFYYTISGKAMRACAFN 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++A   +   +    L +F +SSA   MAG   A                +      I+G
Sbjct: 178 RRAASLVGIDVKRMVLFSFVISSALGSMAGIIIAPLTMTA--YDVGIMLGLKGFCAAIIG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           GM+S         +L  +  L  G+    +   + F     +       +
Sbjct: 236 GMSSGVGTVIGGLVLGTLESLGAGLISSGYKDAIAFIILLLLLFVRPQGL 285


>gi|163845511|ref|YP_001623166.1| hypothetical protein BSUIS_B1425 [Brucella suis ATCC 23445]
 gi|163676234|gb|ABY40344.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 315

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 105/324 (32%), Gaps = 38/324 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             +     +        +   +  +    LI    A   +I+ G  G  S    + Y +G
Sbjct: 6   ALLAIIAAVLALGAPLFASPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGLG 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   I   ++ L  +    +  + +    M++GLP L+ +G Y AIATL + ++   I 
Sbjct: 66  AYGAGIAMVQFNLPFFAGAAIGIVAAVVFAMLIGLPILRLKGHYFAIATLALPQVMAAIT 125

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                                    V             +  + F Y   L +  ++  +
Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L R+        IR+N++   ++       K+ A  +S AF  MAGA  A     + 
Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMGINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222

Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P+       N+ +I + + GG  ++         L  V                    ++
Sbjct: 223 PEAAYQVQLNVQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLST--------------AY 268

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
                    I +   +++    L 
Sbjct: 269 TDVAGMFFGIVIVAAVVLMPRGLA 292


>gi|89076721|ref|ZP_01163007.1| ribose ABC transporter, permease protein [Photobacterium sp. SKA34]
 gi|89047620|gb|EAR53229.1| ribose ABC transporter, permease protein [Photobacterium sp. SKA34]
          Length = 327

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 87/312 (27%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + +     +  +       +   G+   + +                + F  
Sbjct: 88  LCGAFAASMIALEVPVLIAVPTALLAGALLGGISGVIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++      A
Sbjct: 136 TLVTMTLLRGITMVYTDGRPISTGFTDTGDAFAWFGTGYALGIPVPVWLMVIVF-----A 190

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L  T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 191 GVWYLLNHTRFGRYIYALGGNESAARLSGINVDRVKIGVYAICGMLAALAGIIVTSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLV 322


>gi|18313086|ref|NP_559753.1| branched-chain amino acid transport permease protein [Pyrobaculum
           aerophilum str. IM2]
 gi|18160593|gb|AAL63935.1| branched-chain amino acid transport permease protein [Pyrobaculum
           aerophilum str. IM2]
          Length = 319

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/324 (12%), Positives = 110/324 (33%), Gaps = 11/324 (3%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V   L+ ++ + +    + +    +   + V+ + GL++   +  + +    +   +G  
Sbjct: 6   VFIVLVAWIVISSFYFPREVADALVYASVLVLASVGLTLTYQTTKVPNFAHGVFINLGVM 65

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           + + +   Y  S +  +P++ ++S A  + +    L           ++M+ +  NI+  
Sbjct: 66  AALTVAQIYKTSPYAALPLAVVLSTASSLALYFFLLPLYKRQSPPEVMMMATMAYNIVFI 125

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                                  + +     R     ++    +Y +        +  + 
Sbjct: 126 GVL--------NAYADWIGRAAGIFTRGITLRPYDVEILGTAGVYILAPLTASAISLALY 177

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
              +T I  A R   +N++   +L   +      A+A+S A  G+AG F     +     
Sbjct: 178 LFLKTKIGTALRAAVENEELARTLGINVERMYAIAWAISGAVAGVAGVFLPLYIEA--TP 235

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD-CSFNM 318
              +       +  I+GG+ ++        ++  V  L         N+L          
Sbjct: 236 DVGWLLLASFFAASIVGGLNNIYGALAGGVLMGFVELLGTIQFAALLNALFATPQYQVTA 295

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
               + ++A+ + +L+    LL  
Sbjct: 296 YRPLVPLLAIAITLLISPKGLLGR 319


>gi|260431813|ref|ZP_05785784.1| ribose transport system permease protein RbsC [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415641|gb|EEX08900.1| ribose transport system permease protein RbsC [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 357

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 89/313 (28%), Gaps = 18/313 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L     +   L      S   +  +  Q+ I  + A   S+V+ + G + L+     
Sbjct: 49  LIVLVAAILIFGALLGAKFFSPFALTLILQQVQIVGIVAAAQSLVILTAG-IDLSVGAIM 107

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +        RYGL   + I     I  A G + G    + +                
Sbjct: 108 VMSSVVMGQFTFRYGLPPAVAILCGLAIGTAIGAVNGFLVSRVKLPPF------------ 155

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    I      +Y  +          +      F + F +        ++ M  L 
Sbjct: 156 IVTLGMWQIVLAANFLYSQNETIRSQEIEANAPILQLFGAKFNVGGAVFTVGVIFMLVLI 215

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   LR TA       + D+ +A       +    +S + +S      AG        
Sbjct: 216 LVLAYALRHTAWGRHVYAVGDDPEAAELSGVNVHRTLMSVYMLSGLICAFAGWALIGRIG 275

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   + +    + ++VI      GG  S+        I+         +      + 
Sbjct: 276 SVSPTSGQLANIESITAVVIGGISLFGGRGSILGSLFGALIVGVFTLGLRLLGADAQWTF 335

Query: 310 LKFDCSFNMRHTT 322
           L            
Sbjct: 336 LLIGMLIIAAVAV 348


>gi|170745142|ref|YP_001766599.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
 gi|170658743|gb|ACB27797.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
          Length = 299

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 107/318 (33%), Gaps = 27/318 (8%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           +             + +      IYV+   GLS++ G + +++      + +GAY   + 
Sbjct: 4   IAIGGFPLDLLALQLVTGIALGAIYVLVGIGLSLIFGLMNVVNFAHGAFFMVGAYV-GVF 62

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
              Y  S WL +  + +  G  G+ +    ++          L+++     ++++   I 
Sbjct: 63  LYGYTGSFWLSLVAAPLAMGLLGLAVERVLVRPLYGRGIDDPLLLTFGLSYVMVESVRIA 122

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G  G+  A      G                  + ++  +++     +  ++ L++ RT
Sbjct: 123 FGLTGLPFAAPPELRGA----------VDLGIGYFPLYRLFLIGFALAVVGALWLFIERT 172

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                 R    + +    L   I    L+ FA+  A  G+AG   A  +           
Sbjct: 173 PFGLVIRAGARDPQIVQVLGIEIAKVWLAVFALGCALAGLAGILAAPLQGV--TPEMGIP 230

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
                  + ++GGM SL+    A  I+  VV +   +                      +
Sbjct: 231 VLAEAFVVTVVGGMGSLAGAVLAGLIVGVVVAMTSLVAPDMTK--------------MAI 276

Query: 325 VIALFLVILMRSHSLLRL 342
              + LV+L+R   LL  
Sbjct: 277 FALMALVLLVRPRGLLGR 294


>gi|312879835|ref|ZP_07739635.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Aminomonas paucivorans DSM 12260]
 gi|310783126|gb|EFQ23524.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Aminomonas paucivorans DSM 12260]
          Length = 293

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 84/303 (27%), Gaps = 24/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G S+V   L   +        IG Y+        G +IW+   +
Sbjct: 8   VINGLSLGSVYALIAVGYSLVYSILLFSNFAHGGFLVIGGYACYYALKAMGTNIWVAAVL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +  G   ++    + K   +   +   ++       ++          G + A     
Sbjct: 68  SLLAGGVSAILTERLAYKPIRERTNVTLYLLIASMGMSIVIENLFVVTVGGRFRALPPVI 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V                  F    L+        + L+L +T    A R    N +
Sbjct: 128 PTDPVS--------LFGLATTSAFDLLSLVTSVVCLVGLQLFLVKTKWGLAIRAASYNLR 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F V+     + G F +      +         I      ++GG+
Sbjct: 180 TAGLMGVNVNLLISIVFFVAGLLAAVGGIFLSVRY---TLYPQLGMITIKAFVAAVIGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL      + IL     L  G     F                ++   L + +L+    
Sbjct: 237 GSLPGAVVGSIILGLAEMLTAGFISSQF-------------RDLVVFALLIVTLLISPTG 283

Query: 339 LLR 341
           L  
Sbjct: 284 LFG 286


>gi|311103575|ref|YP_003976428.1| urea ABC transporter permease UrtB 1 [Achromobacter xylosoxidans
           A8]
 gi|310758264|gb|ADP13713.1| urea ABC transporter, permease protein UrtB 1 [Achromobacter
           xylosoxidans A8]
          Length = 314

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 94/307 (30%), Gaps = 17/307 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      I ++ A GL++V G +G++++      A+GAY+  ++ + +       + V
Sbjct: 24  FFNGISLFSILLLMAIGLAVVFGLMGVINMAHGELMAMGAYTTYLVSAAFQHWAPGWMDV 83

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +     ++                   +     +L  W      +           
Sbjct: 84  YLFAAIPLAFLVTFAFGYVLERGF--IRWFYNRPLDTLLATWGLSLILQQAYRSIFGAQE 141

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + S +     P+  + + +   ++L     ++  + L L R+A     R +  N+ 
Sbjct: 142 VSVPLASWLSGAWEPTPDLQFPLNRIFILGLTLLVAVGVYLLLYRSAWGLRVRAVTQNRA 201

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              ++           FA+ S   G+AG  F       +         +    +V+ GG+
Sbjct: 202 MAGAVGINTRRVDALTFALGSGLAGIAGCVFTMIGS--TNPGTGQLYIVDSFIVVVFGGV 259

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL   A +   +         +       +        + +              R + 
Sbjct: 260 QSLLGTAFSGLAIAQSQTTLEYLMSGSMAKVTILVLVIVVLY-------------FRPNG 306

Query: 339 LLRLRTP 345
           L   +T 
Sbjct: 307 LFANKTR 313


>gi|89071303|ref|ZP_01158465.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
 gi|89043183|gb|EAR49418.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
          Length = 336

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/310 (11%), Positives = 84/310 (27%), Gaps = 19/310 (6%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIG---------AYSYVILGSRYGLSIWLLIPVS 99
             + A G++++ G L   +       A G         A     +      +  L +P+ 
Sbjct: 25  LALGALGVTLIYGILRFSNFAHGDTMAAGTTATILFTWALQAAGVSLGPLPTALLALPLG 84

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             ++G   +       +F     A   +++      + I    +                
Sbjct: 85  IAVAGLLLLGTDRVVYRFYRARKAAPVILVIVSMGVMFIYNGLVRFVIGVDDQNFADGTR 144

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                   R        +  +      ++    + A +  +L RT    + R   DN+  
Sbjct: 145 FLISARDFRDMTGLEEGLALKSTQVITIVTAVVVVALLFWFLNRTRTGKSMRAFSDNEDL 204

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                          + + +A   +AG  +   +         F   + + +  I+GG+ 
Sbjct: 205 ALLSGINPEKVVTVTWLIVAALATVAGTLYGLDKSF--KPFTYFQLLLPIFASAIVGGLG 262

Query: 280 SLSKIAKATAILIG--------VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           S         ++          + ++   +                     +  + L +V
Sbjct: 263 SPLGAIAGGFLIAFAEVTVTYPLKKILGYLMPESLEPDGLVQLLSTDYKFAVSFVILIVV 322

Query: 332 ILMRSHSLLR 341
           +L R   L R
Sbjct: 323 LLFRPTGLFR 332


>gi|217968889|ref|YP_002354123.1| branched-chain amino acid ABC transporter permease [Thauera sp.
           MZ1T]
 gi|217506216|gb|ACK53227.1| inner-membrane translocator [Thauera sp. MZ1T]
          Length = 324

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 67/308 (21%), Positives = 120/308 (38%), Gaps = 20/308 (6%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
              Y       +  Y +   G+ +VVG  G ++L      A+GAY+  +L +R   +  L
Sbjct: 31  GTDYALGKATLVATYAIAGLGVVVVVGQAGQIALGQAALVALGAYAQALLVARGVPAP-L 89

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
            +PV+A      G +  LP+ +  G Y  ++TL  + I +  L +W+ +T+G AG+ V  
Sbjct: 90  ALPVAAAAGALGGALASLPARRLGGLYFGMSTLAFALIVEEALARWESLTHGAAGLTVGA 149

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                                     +    V + +  L+      L  +    AWR +R
Sbjct: 150 FTLAGWR---------------ADSTLAQATVSVAVLALAMLACARLFASRHGRAWRAVR 194

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           D++ A  +       AK+ AF V  A  G+AG  +A     ISP+ F    +  ++ +  
Sbjct: 195 DDEIAAAACGIDNDAAKMQAFVVGGALSGLAGGLYAHWIGFISPEQFGLVFSFELLMLAF 254

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +GG   L+  A    +++ +  L   +       L       +     L    +  V+L+
Sbjct: 255 IGGARRLAGAAWGALVIVAIPPLISLLRD----RLPGDWARASGLELLLFGAVIVGVVLL 310

Query: 335 RSHSLLRL 342
           R   L   
Sbjct: 311 RPAGLAGE 318


>gi|237798341|ref|ZP_04586802.1| inner-membrane translocator [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331021193|gb|EGI01250.1| inner-membrane translocator [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 352

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 80/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++   +       I    +I+      +       
Sbjct: 79  ITFGLLGVINMAHGEMLMLGAYSTYMVQLMFQRYAPGAIEYYPLIALPVAFFVTAAIGMA 138

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +     + +         +
Sbjct: 139 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPAWLSGGIQVLPNL 196

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 197 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 256

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 257 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVTAAFGLGIANKI 314

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 315 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 349


>gi|86751313|ref|YP_487809.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86574341|gb|ABD08898.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 339

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 93/298 (31%), Gaps = 16/298 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAM 101
               ++  + A GL++V G + +L+       A+GAY   ++            + V+  
Sbjct: 51  LAMGMMIFIMASGLTLVFGLMDVLNFGHGAFIAVGAYVATLVLLPLAGMSQADSLLVNLA 110

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           +     +     S         +  L +       ++              A     +  
Sbjct: 111 VLAPAALAAMAVSGALGLVVERVLILPVYGQHLKQILMTTGGLIVAEQALYALWGPQIIP 170

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F    +    +   VLL    +  +I L L RT I    R   +N++   
Sbjct: 171 LPLPTALRGSFIIGDIAIAKYRLLVLLVGIAVFVAIQLVLNRTKIGLLIRAGVENREMVE 230

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           +L   I    L  F V SA  G  G  +A  R+++          +++  +VI+GG+ S+
Sbjct: 231 ALGYHIKRLFLGVFMVGSALAGFGGIMWALYREQV-HASMGNDLTVLIFIVVIIGGLGSV 289

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
                   ++  V      +                       ++ +  +++ R   L
Sbjct: 290 GGCFIGALLVAMVANYGGFL--------------VPKLALVSNILLMVAILMWRPRGL 333


>gi|28900940|ref|NP_800595.1| ribose ABC transporter permease [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153836717|ref|ZP_01989384.1| ribose transport system permease protein RbsC [Vibrio
           parahaemolyticus AQ3810]
 gi|260366154|ref|ZP_05778614.1| ribose transport system permease protein RbsC [Vibrio
           parahaemolyticus K5030]
 gi|260879796|ref|ZP_05892151.1| ribose transport system permease protein RbsC [Vibrio
           parahaemolyticus AN-5034]
 gi|260894470|ref|ZP_05902966.1| ribose transport system permease protein RbsC [Vibrio
           parahaemolyticus Peru-466]
 gi|260903006|ref|ZP_05911401.1| ribose transport system permease protein RbsC [Vibrio
           parahaemolyticus AQ4037]
 gi|28809386|dbj|BAC62428.1| ribose ABC transporter, permease protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|149750066|gb|EDM60811.1| ribose transport system permease protein RbsC [Vibrio
           parahaemolyticus AQ3810]
 gi|308086429|gb|EFO36124.1| ribose transport system permease protein RbsC [Vibrio
           parahaemolyticus Peru-466]
 gi|308092286|gb|EFO41981.1| ribose transport system permease protein RbsC [Vibrio
           parahaemolyticus AN-5034]
 gi|308108405|gb|EFO45945.1| ribose transport system permease protein RbsC [Vibrio
           parahaemolyticus AQ4037]
 gi|308114760|gb|EFO52300.1| ribose transport system permease protein RbsC [Vibrio
           parahaemolyticus K5030]
          Length = 327

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +     +  +       +    +   + +                + F  
Sbjct: 88  LCGAFAASLIAMEVPVLIAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVVVFAAAWYL 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGMLAALAGIIVTSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLV 322


>gi|311103878|ref|YP_003976731.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310758567|gb|ADP14016.1| inner-membrane translocator 13 [Achromobacter xylosoxidans A8]
          Length = 291

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 52/300 (17%), Positives = 113/300 (37%), Gaps = 41/300 (13%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++ + +    + A  + + +   G+L++       IGAY+  +L   Y     + +    
Sbjct: 13  NLVLTLGTNALLALSIWLTLA-CGMLAMANAAFMGIGAYTAALLTMNYDAPFSVALAGGM 71

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
                   ++GLP+L+  G YLA+ATL   E+ +  ++  + IT G  G+    +L    
Sbjct: 72  AAPALVAALIGLPTLRLSGVYLAMATLGFGEVVRVTILNTESITGGALGLNGIPQLTQWW 131

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                                     ++    +   ++  +R + I  ++  IR ++ A 
Sbjct: 132 H-------------------------VVLAVVIVLFVLWRVRASKIGRSFDAIRGDETAA 166

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             +   +   K+ AF   +   G+AGA  A     I P+ + F   + ++++ ILGG+  
Sbjct: 167 GLMGIDVRANKMLAFVAGAMIAGLAGALNAHLTFFIGPNEYGFDRGVEILTMAILGGIGG 226

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L+     + I+  + E+  G                         + L +++L     + 
Sbjct: 227 LAGPVLGSFIITVLPEMLRGFAD---------------LRLVANGVILVVIVLFLPQGIW 271


>gi|167720834|ref|ZP_02404070.1| putative amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei DM98]
          Length = 278

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 81/294 (27%), Gaps = 17/294 (5%)

Query: 55  GLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
           GL+I  G +G++++       IGAY+  ++ +     +        + +           
Sbjct: 1   GLAITYGLIGVINMAHGEFLMIGAYATYVVQTFVQRYLPGAFDWYPLAAIPVSFAAAAAL 60

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
                    +   +     + +L  +           +      +     S +       
Sbjct: 61  GIVLER--TVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVVNPSWMSGGVTVM 118

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
             +I       +L     +       L +T +    R +  N++    +          A
Sbjct: 119 QNLILPYNRLAILAFALVVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYA 178

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           FA  +   G+ G   A S+          S  +     V+LGG+  ++        L  V
Sbjct: 179 FAFGAGIAGLGGC--ALSQIGNVGPDLGQSYIVDSFMAVVLGGVGQIAGTVLGGFGLGLV 236

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
            +                           +++ + L I  R   +  L+  S  
Sbjct: 237 SKAIEPFWGAVLAK-------------IAVLVMIVLFIQKRPQGMFALKGRSAE 277


>gi|220936271|ref|YP_002515170.1| urea ABC transporter, permease protein UrtC [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219997581|gb|ACL74183.1| urea ABC transporter, permease protein UrtC [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 382

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 52/349 (14%), Positives = 99/349 (28%), Gaps = 36/349 (10%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  V+    L L +  T       ++  + L +   A GL +  G  G+LSL   I + 
Sbjct: 13  GLGGVLIMAALILVVLPTLMDIDQLNLAGRFLAFAFVAVGLVLSWGYGGVLSLGQGIFFG 72

Query: 76  IGAYSYVIL-----------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           IG Y+  +              +    I   +  + + S                  L +
Sbjct: 73  IGGYAMAMFLKLEASDPESTSIQTTPGIPDFMDWNQITSLPWFWEPFYSLTFTIIAILVL 132

Query: 125 ATLIMSEI-----------FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
             L    I               +I    +      I     L      +  L     + 
Sbjct: 133 PALFAWIIGTAMFKRRVSGVYFAIITQAIVVILTILIIGQQGLTGGVNGITDLRTLKGWD 192

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
                    +YYV   +   +  + +W+  T        +RD +         +   K+ 
Sbjct: 193 IRTDEALFILYYVNAFLLIGAVLLGMWILSTKYGRILIAMRDREDRVRFSGYDVANFKVF 252

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            F V++   G+ GA F      +SP +     +I  +    +GG  SL        I+  
Sbjct: 253 VFCVAALLSGIGGAMFTLQVGFMSPSIIGIVPSIEFVIFAAVGGRLSLLGAVYGALIVSY 312

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +                    ++      ++      V++   + L  L
Sbjct: 313 LRTTVAE--------------AYPQLWLFVIGGVFIAVVMFAPYGLAGL 347


>gi|308188472|ref|YP_003932603.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Pantoea vagans C9-1]
 gi|308058982|gb|ADO11154.1| High-affinity branched-chain amino acid transport system permease
           protein livH [Pantoea vagans C9-1]
          Length = 308

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 85/305 (27%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   I+ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDTTWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
                    +I+                     +   I  I           +    R  
Sbjct: 72  MIAAGFVMAVIISSAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTQGSRDL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L + +                      + +       ++  ++R + +  A R   ++ 
Sbjct: 132 ALPSLITGQWTVGESNGFAAAISTMQIVIWVVTFLAMLALTTFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +AG         I+     F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGSIN-PFIGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L     L        +  ++ F               L +V+L+   
Sbjct: 251 IGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSF-------------ALLIVVLLVMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|303231101|ref|ZP_07317841.1| branched-chain amino acid ABC transporter, permease protein
           [Veillonella atypica ACS-049-V-Sch6]
 gi|302514232|gb|EFL56234.1| branched-chain amino acid ABC transporter, permease protein
           [Veillonella atypica ACS-049-V-Sch6]
          Length = 293

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 99/308 (32%), Gaps = 27/308 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GL++V G L ++++     + IGA+  + + + + ++I++ + V
Sbjct: 6   LVNGLTLGSLYAVLAIGLTLVFGVLNIINMAHGGIFMIGAFVGLFMVTVFDVNIFVALIV 65

Query: 99  SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           +  +    G ++   +     +     +A LI +      L     +  G          
Sbjct: 66  AMAVGAVLGYLLEFVALRPLRKKKVSHLAPLISTIGVSIFLESLALLLWGPQTRSFPPDY 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                +  + M  + + +           ++T I  A R +  +
Sbjct: 126 IGGLIDFGVFKISMVQIIGLGVSVLLMVILNVVI-----------KKTKIGKAIRAVSMS 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    L             ++SA    AG     S + I P M         ++++ILG
Sbjct: 175 TETAALLGINPTMIISVTVMIASALGAAAGVLVGLSFNAIEPTM-GVIIGFKGLAVLILG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +++       IL              F   + F               + +++  R 
Sbjct: 234 GLGNITGAMVGGFILGIAEIFSVAYGASTFRDAVAFG-------------LIIVLLFWRP 280

Query: 337 HSLLRLRT 344
             L   + 
Sbjct: 281 QGLFGSKD 288


>gi|159184145|ref|NP_353099.2| ABC transporter, membrane spanning protein (sugar) [Agrobacterium
           tumefaciens str. C58]
 gi|159139480|gb|AAK85884.2| ABC transporter, membrane spanning protein (sugar) [Agrobacterium
           tumefaciens str. C58]
          Length = 360

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 93/313 (29%), Gaps = 18/313 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +   +      G   S   +  +  Q+ I  +     S+V+ + G + L+     
Sbjct: 52  LIVLVLSLAIFGMTLGGKFFSAFSLTLILQQVAIVGIVGAAQSLVILTAG-IDLSVGAIM 110

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +        RYGL   L I     +   CG I G+   + R     +   +   +  
Sbjct: 111 VLSSVVMGQFTFRYGLPAELSIICGLAVGAFCGFINGVLVSRMRLPPFIVTLGMWQIVLA 170

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +     T     I     +               F ++  I      Y +L M  L 
Sbjct: 171 TNFLYSANETIRAQDIVQQAPILQF------------FGNNIRIGNAVFTYGVLAMVLLV 218

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A +   L RTA       + D+  A       +     + + +S      AG        
Sbjct: 219 ALLWYVLNRTAWGRHLYAVGDDPDAAELAGVNVKRMLTTVYTLSGLICAFAGWALIGRIG 278

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   +F+    + ++VI      GG  S+  +     I+         +      + 
Sbjct: 279 SVSPTAGQFANIESITAVVIGGISLFGGRGSIMGMIFGALIVGVFSLGLRLIGTDPQWTY 338

Query: 310 LKFDCSFNMRHTT 322
           L       +    
Sbjct: 339 LLIGVLIILAVAI 351


>gi|299066767|emb|CBJ37961.1| putative ABC-type branched-chain amino acid transporter, membrane
           component (livH) [Ralstonia solanacearum CMR15]
          Length = 325

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 113/321 (35%), Gaps = 27/321 (8%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
            + +     L+  M + GL+++   +G+L+      Y +GAY   ++        W  + 
Sbjct: 17  NLLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYVVSGYL--GFWAALI 74

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           V+ ++ GA G ++    L+    Y  +A L+ +     ++ +   +  G         L 
Sbjct: 75  VAPLLVGALGALVERFGLRTVHRYGHVAELLFTFGLAYLIEEGVKLVWG---------LP 125

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   V   +    F      +  +  +++L    +   I L L RT I    +    + 
Sbjct: 126 AVPYRVPEALDGPLFTLFTSSFPKYRAFMMLVSLLMLVGIFLLLTRTRIGLVIQAALTHP 185

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +L   +    +  F    A  G+AG         ++      +   IV  + ++GG
Sbjct: 186 DMVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NAFVTEPSMAAAVGSIVFVVAVVGG 243

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL------- 330
           M SL     A+ ++  +      ++    + L K   + N     + V  L +       
Sbjct: 244 MGSLVGAFIASLLIGCIQTFAVTLDVSVTSLLGKLGVALNPDVPLISVWNLTIAQVAPVL 303

Query: 331 -------VILMRSHSLLRLRT 344
                  +++ R   L+  R 
Sbjct: 304 PYLLLVLMLIFRPRGLMGTRE 324


>gi|269964359|ref|ZP_06178601.1| D-ribose transport system permease protein [Vibrio alginolyticus
           40B]
 gi|269830856|gb|EEZ85073.1| D-ribose transport system permease protein [Vibrio alginolyticus
           40B]
          Length = 327

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALIFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + +     +  +       +    +   + +                + F  
Sbjct: 88  LCGAFAASMIALEVPVLVAVPTALVAGAALGAISGIIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 136 TLVTMTLLRGVTMVYTEGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVVVFAAAWYL 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGMLAALAGIIVTSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLV 322


>gi|218691742|ref|YP_002399954.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli ED1a]
 gi|218429306|emb|CAR10266.2| leucine/isoleucine/valine transporter subunit ; membrane component
           of ABC superfamily [Escherichia coli ED1a]
 gi|324009342|gb|EGB78561.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Escherichia coli MS 57-2]
          Length = 308

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y I +Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFMIIAALMMMGIDTGWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|25027557|ref|NP_737611.1| putative ABC transporter permease protein [Corynebacterium
           efficiens YS-314]
 gi|259507035|ref|ZP_05749935.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Corynebacterium efficiens
           YS-314]
 gi|23492839|dbj|BAC17811.1| putative ABC transporter permease protein [Corynebacterium
           efficiens YS-314]
 gi|259165313|gb|EEW49867.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Corynebacterium efficiens
           YS-314]
          Length = 294

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 96/310 (30%), Gaps = 25/310 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      + ++ A GLS+  G +G++++       +GAY+  ++      + + L+  
Sbjct: 8   LVAGLSVGSVLLLVAVGLSLTFGQMGVINMAHGEFIMVGAYTAFVVQGVINSAGFSLLIS 67

Query: 99  SAMISGACGMIMGLP-SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             +     G++  L      R  Y      +++     ++++        A         
Sbjct: 68  IPLAFAIGGLLGVLLEQTLLRHLYHRPLDTLLATFGVGLILQQLARDIFGAPAVDVRAPE 127

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
           +L                  +  +   ++L       A + ++L R+      R +  N+
Sbjct: 128 WLRGHT---------EILGTLVPVSRLFILFLALASVAGLAVFLNRSIWGRRIRAVVINR 178

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +            F + S   G+AG   A +    +      +  +    +V  GG
Sbjct: 179 DLAETNGINTRATDRMTFFIGSGLAGIAGV--AITLIGATGPTIGQNYIVDAFLVVAAGG 236

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           +  +        +L  +                            +++IA+   +  R  
Sbjct: 237 IGKIKGAVIMAFVLGIMQAFIEYSTGASIAK-------------FIVLIAVVAFLQFRPQ 283

Query: 338 SLLRLRTPSN 347
            L + RT S 
Sbjct: 284 GLFQTRTRSL 293


>gi|300865986|ref|ZP_07110720.1| Inner-membrane translocator [Oscillatoria sp. PCC 6506]
 gi|300335977|emb|CBN55878.1| Inner-membrane translocator [Oscillatoria sp. PCC 6506]
          Length = 358

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 111/366 (30%), Gaps = 45/366 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSM--------------GIQILIYVMFA 53
           +  +  IL  L V Y +LL   +      + +  +               +   +  + A
Sbjct: 1   MKNWRIILLYLGVAYIILLLGPIAGFDLPRIVVEIVRSPQVLIQQLLVGLVNGALLAIIA 60

Query: 54  WGLSIVVGSLGLLSLNCVIAYAIGAYS-----------YVILGSRYGLSIWLLIPVSAMI 102
            G ++V G + L++      Y +G ++                +    ++ + +  S   
Sbjct: 61  LGYTMVYGIIELINFAHGDLYMLGGFAALTVMGALGIQDGAPLAVAIPAMLVALIASTGF 120

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG------KAGIYVADRL 156
                +I    + +   +   +A LI +     I         G        G   A   
Sbjct: 121 CAGMNIITERYAYRPLRNAPRLAPLISAIGVSFIFQNMGLFWGGLRAFFPVMGTNSAAPK 180

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
            F     R  I       S +++      VL+    L  S+ L+++ T    A R    N
Sbjct: 181 SFPDLLPRIDILKALGIDSSIVFTTKDLIVLVVATVLMVSLHLFVKYTRWGKAMRATAQN 240

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +       F +  A  G AG       + I   M  F+  +   +  +LG
Sbjct: 241 RDAAKIMGINVDQIIALTFLIGGALAGAAGLLVGLYNNTIVFTM-GFTAGLRAFTAAVLG 299

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++        ++  +  +        + +   F               L +++  R 
Sbjct: 300 GIGNIVGAMLGGVLIGELSSISDQYLSSRWTNAWVF-------------AVLVIILAFRP 346

Query: 337 HSLLRL 342
             LL  
Sbjct: 347 GGLLGE 352


>gi|86748697|ref|YP_485193.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86571725|gb|ABD06282.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 433

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/329 (14%), Positives = 113/329 (34%), Gaps = 32/329 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +   L  L L    S     +    + I ++FA   +I++G  G+LS    + Y +G 
Sbjct: 24  VWIATALTLLLLPQIFSSGGSLTTFSLVGISIIFALSYNILLGQTGMLSFGHAVYYGLGG 83

Query: 79  Y-----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +       ++  +++ + + L+  +  M       ++G    +  G   A+ +L ++E+ 
Sbjct: 84  FLAIHAINLLGANKWAIPLPLVPLIGGMAGLFLAALIGWVMTQRSGTAFAMISLGLAELV 143

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
            +  +  +    G+AGI              +  + F+        +I +YY++     +
Sbjct: 144 ASSALILRTFFGGEAGIS------------ANRTKLFKVFGLSFGPQIQIYYLVAAWTLI 191

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +   +  L RT +      +RDN +    +       +  AF  +  F G+AGA  A + 
Sbjct: 192 AIIAMYALTRTPLGRMCNAVRDNPERVQFVGYDPHVVRYLAFCFAGFFAGIAGALAAINF 251

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           +  +       ++  V+    +GG+            +  +      +            
Sbjct: 252 EIANSAYLGAVQSGTVLFAAYIGGIGFFIGPIVGAIFVTILSLGLSDL------------ 299

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                       +    V+L     +  L
Sbjct: 300 ---TQVWQLYFGLFFIAVVLYAPGGITGL 325


>gi|320335127|ref|YP_004171838.1| ABC transporter integral membrane subunit [Deinococcus maricopensis
           DSM 21211]
 gi|319756416|gb|ADV68173.1| ABC-type transporter, integral membrane subunit [Deinococcus
           maricopensis DSM 21211]
          Length = 322

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 69/309 (22%), Positives = 114/309 (36%), Gaps = 36/309 (11%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y+  +G   L+    A    I+    G LSL     Y IGAY++ IL         L + 
Sbjct: 42  YLLQIGYFTLVAGTLALSWDILA-RSGQLSLAHAAFYGIGAYTFAILSKAGVAWP-LGLL 99

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            +A ++    +I+G  + +  G Y AIATL  +E+ + ++        G     +   L 
Sbjct: 100 AAAALAALISVILGAVASRLSGMYFAIATLAFTEVTRTVVQNLPESFAGGPTGLLVPAL- 158

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                                     Y + LG+  L+  + L +R T +  A+  IR  +
Sbjct: 159 ------------------LGGNSRAQYLLALGILVLAVLVSLTVRLTRLHAAFSAIRQGE 200

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DMFKFSENIIVISIVILG 276
                L   ++  KL AFA+SSA    AG  +A     I+P D F  + +I  ++  I G
Sbjct: 201 DVARVLGVNVVRYKLLAFAISSALAAAAGVLYAGKTFFINPGDTFSIATSIAPLTTSIFG 260

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +         +L    EL                  F   +  +  + L + IL   
Sbjct: 261 GLYTTLGPVLGATVLRVAEELL--------------HSQFKSGYLIVYGLVLIISILWLP 306

Query: 337 HSLLRLRTP 345
             L+ L   
Sbjct: 307 RGLMGLLRR 315


>gi|313892697|ref|ZP_07826278.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Veillonella sp. oral taxon 158
           str. F0412]
 gi|313442628|gb|EFR61039.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [Veillonella sp. oral taxon 158
           str. F0412]
          Length = 293

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 100/308 (32%), Gaps = 27/308 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GL++V G L ++++     + IGA+  + + + + ++I++ + V
Sbjct: 6   LVNGLTLGSLYAVLAIGLTLVFGVLNIINMAHGGIFMIGAFVGLFMVTIFNVNIFVALIV 65

Query: 99  SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           +  +    G ++   +     +     +A LI +      +     +  G          
Sbjct: 66  AMAVGAILGYLLEFVALRPLRKKKVSHLAPLISTIGVSIFIESLALLLWGPQTRSFPPDY 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   +            +  + M  + + +           ++T I  A R +  +
Sbjct: 126 IGGLIDFGAFKISMVQIIGLGVSIVLMLILNIVI-----------KKTKIGKAIRAVSMS 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    L             ++SA    AG     S + I P M         ++++ILG
Sbjct: 175 TETAALLGINPTMIISVTVMIASALGAAAGVLVGLSFNAIEPTM-GVIIGFKGLAVLILG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +++       IL              F   + F               + L++  R 
Sbjct: 234 GLGNITGAMVGGFILGVAEVFSVAYGASTFRDAVAFG-------------LIILLLFWRP 280

Query: 337 HSLLRLRT 344
             L   + 
Sbjct: 281 QGLFGSKD 288


>gi|288960411|ref|YP_003450751.1| ABC transporter permease protein [Azospirillum sp. B510]
 gi|288912719|dbj|BAI74207.1| ABC transporter permease protein [Azospirillum sp. B510]
          Length = 310

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 90/305 (29%), Gaps = 11/305 (3%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     ++  + A GLS+V G + L++L   + Y +GAY    LG   G      +   
Sbjct: 9   LNGLQFGVLLFLVAAGLSLVFGVMDLINLAHGVQYMLGAYVAATLGVWTGSFWLGALLAL 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +       +  L              L    +   +    + +           +    
Sbjct: 69  PVALLVGLALEWLVFRHLYRRDHLSQVLATFGVILTVDEATRALWGSA------PQTVLE 122

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +           + +IY  +   ++     +   +   + RT      R    +   
Sbjct: 123 PAWLSGGPMGGVEIVAGLIYPTYRLVIIGIGILVPLLLWFLVERTRAGMLVRAGATHPAM 182

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   I       FA  +   G AGA  +                I+   ++++GG+ 
Sbjct: 183 VSALGVDIRRLFTVVFAFGAMLAGFAGALASPIFPVAPGMGDSVL--ILCFVVIVIGGVG 240

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS---FNMRHTTLMVIALFLVILMRS 336
           S+     A  ++  +  +   M       LL    +        + L+ I +  ++  R 
Sbjct: 241 SIRGAFIAALLVGLLDSIGRAMLPDLLRLLLDPSSARQTGAALASMLVYIVMAGILFFRP 300

Query: 337 HSLLR 341
             L  
Sbjct: 301 AGLFP 305


>gi|291301245|ref|YP_003512523.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728]
 gi|290570465|gb|ADD43430.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728]
          Length = 320

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 82/313 (26%), Gaps = 24/313 (7%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS-YVILGSRYGLSIWLLIPV 98
               +   IY + A G ++V G L L++      + +GA++   I               
Sbjct: 15  MDGLVIGGIYALIALGYTLVYGVLKLINFAHSEVFMLGAFAAVGIWTVLGVNEGPTPSLG 74

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLI---------MSEIFQNILIKWKPITNGKAG 149
             ++    G+   + +       L               +  +   I +           
Sbjct: 75  GFILLAIVGLAAAMAASGGTALALEYIAYRPLRRKKAPRLVFLITAIGVSLALNEGMGVL 134

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
               D           LI +       +        +++    L  ++ +++ RT     
Sbjct: 135 TSRDDVGVPEVFKQTILIDWDSGALGRLRVSDLDIGIIVMAFGLLVALDMFVNRTRPGAG 194

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R +  +      +           F +     G+A   +      I      F   +  
Sbjct: 195 IRAVAQDPDTAALMGINKNRIFALTFILGGLAAGVAAVMWDLRYSSI-KHSLGFLLGVKA 253

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  ++GG+ +L         L  +      +    +  ++ F     +           
Sbjct: 254 FTAAVMGGIGNLRGALVGGFALGLIENWSGAVFGNAWLDVVAFTVLVVV----------- 302

Query: 330 LVILMRSHSLLRL 342
             ++ R   LL  
Sbjct: 303 --LMFRPTGLLGE 313


>gi|254227591|ref|ZP_04921022.1| amino acid or sugar ABC transport systems, permease protein,
           putative [Vibrio sp. Ex25]
 gi|262395640|ref|YP_003287493.1| ribose ABC transport system permease protein RbsC [Vibrio sp. Ex25]
 gi|151939633|gb|EDN58460.1| amino acid or sugar ABC transport systems, permease protein,
           putative [Vibrio sp. Ex25]
 gi|262339234|gb|ACY53028.1| ribose ABC transport system permease protein RbsC [Vibrio sp. Ex25]
          Length = 327

 Score = 70.3 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALIFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + +     +  +       +    +   + +                + F  
Sbjct: 88  LCGAFAASMIALEVPVLVAVPTALVAGAALGAISGIIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 136 TLVTMTLLRGVTMVYTEGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVVVFAAAWYL 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGMLAALAGIIVTSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLV 322


>gi|319792603|ref|YP_004154243.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315595066|gb|ADU36132.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 337

 Score = 70.3 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 45/284 (15%), Positives = 103/284 (36%), Gaps = 12/284 (4%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            ++  +             +  +I I  +FA  L +++G  G++SL     +  GAY+  
Sbjct: 30  FVVWAVAFALPLLMPSHSLLVNEIAIVALFAMSLDLILGYTGIVSLGHAAFFGFGAYAAA 89

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +          + +  + ++S   G++  +  L+       + TL  + +   +  K   
Sbjct: 90  LFAKLVMPDPTVGLVFATVLSALLGLVASVTILRGSDLTRLMVTLGTALLLLELANKLDW 149

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+        LG               F +Y     +  L +  +   ++  L 
Sbjct: 150 LTGGADGLQGVVMGPVLGL------------FEFDLYGRTAAWYSLAVMLVLFLVMRRLV 197

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            +      + IRDN+    ++   ++      + V++   G AGA  A +    S D+  
Sbjct: 198 HSPFGATLKAIRDNRLRAMAIGIPVVSRLAVIYTVAAGIAGAAGALLAQTTGFASLDVLA 257

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           F  +  V+ ++++GG+  L        +   +      +   Y+
Sbjct: 258 FDRSADVLLMLVIGGVGWLYGGVAGAIVFKLLQNWLSAVTPQYW 301


>gi|114328499|ref|YP_745656.1| amide-urea transport system permease [Granulibacter bethesdensis
           CGDNIH1]
 gi|114316673|gb|ABI62733.1| amide-urea transport system permease protein [Granulibacter
           bethesdensis CGDNIH1]
          Length = 308

 Score = 70.3 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 93/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   ++V+ A G++I+ G +G++++       +GAY   +    +   I     +   I
Sbjct: 22  LILFSVFVLMALGMAIIFGQMGVINMAHGEFMILGAYVTYLTSQLFSQFIPGAFAIYFPI 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +          +         +   +      ++L  W      +           +G  
Sbjct: 82  AVVLAFCASGLAGMLVEW--LMIRHLYKRPLDSLLATWGLSLIMQQIYRSVFGAREVGVN 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +      S  +   I    V+     ++  + L + R+      R +  N+    +
Sbjct: 140 LPEWMMGATHLSESIEIPINGLLVMGLTTLITVGVYLLMFRSGWGKQVRAVVQNRPMAAA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           F +     G+AGA F       +         +    +V+ GG +SL 
Sbjct: 200 VGIDTERVDRRTFGLGCGIAGVAGAAFTMIGS--TSPTAGQLYIVDTFLVVVFGGASSLL 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               ++++++ +++++R   L  L
Sbjct: 258 GTIASAFTISQARSTLEFFLS-------------GSMAQVIVLLSVIIILMIRPQGLFVL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|83591923|ref|YP_425675.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
 gi|83574837|gb|ABC21388.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
          Length = 613

 Score = 70.3 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 50/281 (17%), Positives = 110/281 (39%), Gaps = 18/281 (6%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           ++ +         Y  S+  + LI  + A  L +++G+ G++S      + +GAY   + 
Sbjct: 318 VVLVLAAPRFLDAYGLSLLCEALILALSASALQLLMGTGGMVSFGHGAFFGLGAYGTAVA 377

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
             + GLS+ + +  + +  G  G+++G    +  G YLA+ TL  +EI   + I+   +T
Sbjct: 378 VVQGGLSLPIALACAPLAGGLGGLLVGWLISRLSGVYLAMLTLAFAEIIHALAIQAVGVT 437

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G  G+       +                          ++++ +C  +   +  L   
Sbjct: 438 GGDNGLIGVWPPPW------------------AGDPAVFAWLVMAICLPALFGLRALALG 479

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                 R +RD +    +            FA+  A  G+AG  FA  +  + P +    
Sbjct: 480 EFGRRLRALRDARSRAEASGIAAARLHALTFAIVGAGAGLAGGLFAFLKGSVFPAITAIP 539

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
            ++  + +V+LGG+ +L+       + +G+  +       +
Sbjct: 540 TSVDALVMVLLGGLHALAGPLVGAFLYLGLESVVAARTDLW 580



 Score = 46.8 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 90/304 (29%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
                       + A GLSI+ G   +++      + IGAY    L    GL  W  + +
Sbjct: 10  FLGGLASASSLFLVAAGLSIIFGVTRVVNFAHGTLFMIGAYLAYTLAETLGLGFWPALLL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +  G  G ++ +  L+       +  L+ +     I     P+  G   +        
Sbjct: 70  APLAVGGLGALIEIGLLRRIYRAPELFQLVATFALVLIASDVVPMIWGPEDLLGPRAPGL 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                     +  +++     +  ++ L   RT      R   ++++
Sbjct: 130 GGA----------VSVMGRAVPEYDLFLIALGPLVLGALWLVFTRTRWGLLVRAATEDRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L T   +     FA+ +   G+ GA                     V+ +V    M
Sbjct: 180 MVAALGTDQRWLFTGVFALGALLAGLGGALALPREAIGHGMDAGVIVQAFVVVVVGG--M 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  +L  V                     F       M + +  V+++R   
Sbjct: 238 GSVPGAYLAAVLLGLVNAFGVAF--------------FPQGTLVTMGLVMGAVLIVRPRG 283

Query: 339 LLRL 342
           LL  
Sbjct: 284 LLGR 287


>gi|170731459|ref|YP_001763406.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
 gi|169814701|gb|ACA89284.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
          Length = 294

 Score = 70.3 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 104/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +GL  W ++ ++ ++ GA G+ +    L++      +  L+++     ++        G
Sbjct: 63  YFGLPYWAMLVLAPVLVGAFGIAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 123 SSGQPYDVPSQLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +                     +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSIVTGLLLGVIEGFTRVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L R   L  
Sbjct: 277 IMAIVLLFRPAGLFG 291


>gi|207722634|ref|YP_002253070.1| amino-acid transmembrane lipoprotein [Ralstonia solanacearum MolK2]
 gi|206587816|emb|CAQ18398.1| amino-acid transmembrane lipoprotein [Ralstonia solanacearum MolK2]
          Length = 293

 Score = 70.3 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 109/303 (35%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y +FA G ++V G LG+++L+    + +GAY+ + + + + L +W  + V
Sbjct: 6   LVNALSLGCVYALFALGFTLVFGILGVINLSHGAVFMLGAYAALQVVAHFELPLWAALAV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++SG  G+++           L       +      +I                    
Sbjct: 66  GFIVSGVAGLVIDAL--------LLRPLRRRNAPHLIPMIATIGAGIAINNAMQGVFGAE 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L+         V        +++    L A+++L L+RT +  A R I ++ K
Sbjct: 118 NLRFPAGLVSDASLDLGGVHLTPLELGIIVLSFVLMAALMLLLKRTQLGRALRAIAESPK 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +    L     ++A  G+AG       + + P M +   +  + +++ILGG+
Sbjct: 178 AAALLGINVEGLFLLTSFAAAALGGLAGVLIGLYSNAVFPLMGQPMLHKGI-AVIILGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +         L     L            + F               LFL++L+R   
Sbjct: 237 GDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG-------------LLFLILLVRPQG 283

Query: 339 LLR 341
           L  
Sbjct: 284 LFG 286


>gi|241202881|ref|YP_002973977.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240856771|gb|ACS54438.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 354

 Score = 70.3 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 94/314 (29%), Gaps = 19/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +   +      G   S   +  +  QI I  +     ++V+ + G + L+  +  
Sbjct: 45  LIVLVLAIVIFGITIGGRFFSSYTLTLILQQIAIVGILGAAQTLVILTAG-IDLSIGVIM 103

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I A     +   YG+   + +    ++ G CG++ G      +                
Sbjct: 104 VISAVIMGNVAITYGIPTPIAVAAGMLVGGLCGLLNGFLVAYMKLPPFI----------- 152

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    I      IY A+                 F  SF +    +   ++ M  L 
Sbjct: 153 -VTLGTWNIVMATNFIYSANETIRDTDVDEKAPLLHLFAVSFKLGSAVLTLGVIAMVLLV 211

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L  TA       + D+ +A            L+ +A+S    G+A         
Sbjct: 212 LVLWYVLNHTAWGRHVYAVGDDPEAAKLSGIQTKKVLLTVYAISGVIAGLAAWVSIGRNG 271

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            ISP       N+  I+  ++GG+       S+        I+  V      +       
Sbjct: 272 SISPSSAVTDFNLQAITATVIGGISLFGGRGSILGTLFGAMIVGVVSMGLNMLGADPQWK 331

Query: 309 LLKFDCSFNMRHTT 322
           +L            
Sbjct: 332 VLLTGVLIIAAVAI 345


>gi|153940465|ref|YP_001389826.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium botulinum F str. Langeland]
 gi|168177800|ref|ZP_02612464.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium botulinum NCTC 2916]
 gi|168181327|ref|ZP_02615991.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium botulinum Bf]
 gi|226947690|ref|YP_002802781.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium botulinum A2 str. Kyoto]
 gi|237793781|ref|YP_002861333.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium botulinum Ba4 str. 657]
 gi|152936361|gb|ABS41859.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium botulinum F str. Langeland]
 gi|182670508|gb|EDT82482.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium botulinum NCTC 2916]
 gi|182675512|gb|EDT87473.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium botulinum Bf]
 gi|226842075|gb|ACO84741.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium botulinum A2 str. Kyoto]
 gi|229262690|gb|ACQ53723.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium botulinum Ba4 str. 657]
 gi|295317913|gb|ADF98290.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium botulinum F str. 230613]
          Length = 290

 Score = 70.3 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 106/304 (34%), Gaps = 25/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G +++ G L +L+         G + +  + S + + + L I +
Sbjct: 6   LVNGITLGSIYCLAALGFNMIFGVLKMLNFAHGEILMFGTFVFFTMISIFKIPLILAIIL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I+G  G+++ L + K      A+A L+ S     +L     +  G            
Sbjct: 66  TIVITGLIGVLLYLIAYKPVLKGDAMAPLLSSLGVSIMLEALGQLIWGTE---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    +  + +       ++ L    L   +  ++ ++ I    R +  N+K
Sbjct: 116 -IIPFPINIPKGIYSIASIKLSNIQIFIFLFSITLMIILYKFIMKSNIGLQIRALSYNRK 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        +  F++++    ++G   +   D +   M      I   +  ILGG+
Sbjct: 175 YAELMGIETDKITMIVFSLATILAMVSGILSSMYYDALYVTM-GSGVMIKAFAAAILGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL     L        +   + F             I L LV++++ + 
Sbjct: 234 GSIPGALVGGYILGVSESLVGAYISTSYVDGIAF-------------IILVLVLIIKPNG 280

Query: 339 LLRL 342
           +   
Sbjct: 281 IFGE 284


>gi|83749707|ref|ZP_00946686.1| LivH [Ralstonia solanacearum UW551]
 gi|207738528|ref|YP_002256921.1| amino-acid transmembrane lipoprotein [Ralstonia solanacearum
           IPO1609]
 gi|83723632|gb|EAP70831.1| LivH [Ralstonia solanacearum UW551]
 gi|206591896|emb|CAQ58802.1| amino-acid transmembrane lipoprotein [Ralstonia solanacearum
           IPO1609]
          Length = 293

 Score = 70.3 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 109/303 (35%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y +FA G ++V G LG+++L+    + +GAY+ + + + + L +W  + V
Sbjct: 6   LVNALSLGCVYALFALGFTLVFGILGVINLSHGAVFMLGAYAALQVVAHFELPLWAALAV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++SG  G+++           L       +      +I                    
Sbjct: 66  GFIVSGVAGLVIDAR--------LLRPLRRRNAPHLIPMIATIGAGIAINNAMQGVFGAE 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L+         V        +++    L A+++L L+RT +  A R I ++ K
Sbjct: 118 NLRFPAGLVSDASLDLGGVHLTPLELGIIVLSFVLMAALMLLLKRTQLGRALRAIAESPK 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +    L     ++A  G+AG       + + P M +   +  + +++ILGG+
Sbjct: 178 AAALLGINVEGLFLLTSFAAAALGGLAGVLIGLYSNAVFPLMGQPMLHKGI-AVIILGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +         L     L            + F               LFL++L+R   
Sbjct: 237 GDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG-------------LLFLILLVRPQG 283

Query: 339 LLR 341
           L  
Sbjct: 284 LFG 286


>gi|299068451|emb|CBJ39674.1| high-affinity branched-chain leucine/isoleucine/valine transporter
           subunit protein (ABC superfamily, membrane) [Ralstonia
           solanacearum CMR15]
          Length = 293

 Score = 70.3 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 55/303 (18%), Positives = 107/303 (35%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y +FA G ++V G LG+++L+    + +GAY+ +   + + L +W  + V
Sbjct: 6   LVNALSLGCVYALFALGFTLVFGILGVINLSHGAVFMLGAYAALQAVAHFELPLWAALLV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               SG  G+I+ +         L       +      +I                    
Sbjct: 66  GFAASGVAGLIIDVL--------LLRPLRRRNAPHLIPMIATIGAGIAINNAMQGVFGAE 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L+         V        +++    L A+++L L+RT +  A R I ++ K
Sbjct: 118 NLRFPAGLVSDTSLDLGGVHLTPLELGIIVLSFALMAALMLLLKRTQLGRALRAIAESPK 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +    L     ++A  G+AG       + + P M +   +  + +++ILGG+
Sbjct: 178 AAALLGINVEGLLLLTSFAAAALGGLAGVLIGLYSNAVFPLMGQPMLHKGI-AVIILGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +         L     L            + F               LFL++L+R   
Sbjct: 237 GDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG-------------LLFLILLVRPQG 283

Query: 339 LLR 341
           L  
Sbjct: 284 LFG 286


>gi|266625572|ref|ZP_06118507.1| urea ABC transporter, permease protein UrtB [Clostridium hathewayi
           DSM 13479]
 gi|288862522|gb|EFC94820.1| urea ABC transporter, permease protein UrtB [Clostridium hathewayi
           DSM 13479]
          Length = 299

 Score = 70.3 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 85/283 (30%), Gaps = 16/283 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G +G++++       IGAY+  ++ + +       +     I       +   SL +
Sbjct: 27  ITFGLMGVINMAHGEFIMIGAYTAYVVQNIFQAYFPSQVFDVYCIVAIILSFLAAASLGY 86

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
             + L I  L       ++L+ W      +           +G    + +      S  V
Sbjct: 87  VLERLVICRL-YGRAADSLLVTWGISLILQQAARSIFGSPNVGVKAPAFLERTIRISGMV 145

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
              +   ++LL        + + + +T      R +  N++   SL           FA+
Sbjct: 146 ALPMKRIFILLIAVCCLTGVYVLMYKTRQGRNIRAVMQNREMAASLGVNTKRIDSMTFAI 205

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG   A +           +  +     V++GG  S+         +      
Sbjct: 206 GSGLAGLAGC--ALTWIGAIGPTLGTNYIVDTFMTVVVGGAGSILGSVLGAGFIGIGQTA 263

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
              +                     L+   + +++  R   + 
Sbjct: 264 FEFLTSASIGK-------------VLIFACVIVLLQFRPKGIF 293


>gi|332285152|ref|YP_004417063.1| inner-membrane translocator [Pusillimonas sp. T7-7]
 gi|330429105|gb|AEC20439.1| inner-membrane translocator [Pusillimonas sp. T7-7]
          Length = 285

 Score = 70.3 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 101/303 (33%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL+I+ G L +++      Y +GAY         G+  WL + +
Sbjct: 3   LLNSLDIGLLLFVIAVGLNIIFGVLNIINFAHGALYMLGAYLAYSCVILLGMPFWLTLLI 62

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +      + +    L+F  +     +L+++     I+ +   +  G     +      
Sbjct: 63  APLGVAVLAIAIDRLMLRFIYEREISDSLLLTFSLLLIINESVRLIWGTGIHVIDPP--- 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L++        + Y ++  +V+     +   +     RT +    R    +++
Sbjct: 120 ------TLLQGTVALPGGISYPLYSLFVVGVGLLILFGLWYLFNRTRVGKIMRAAALDRE 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           FA  +    + G   A    R           I    +V++GG+
Sbjct: 174 MAQVLCIDTKLVITGVFAFGAWLAAVGGVVAAP--MRAIDPGMGDKIIIESFIVVVIGGL 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         +L  +  L                  F   +  L  I + +V+L++ H 
Sbjct: 232 GSFPGALLGAIVLGLMYGLGGRF--------------FPEVNLILPFIGMAIVLLLKPHG 277

Query: 339 LLR 341
           L+ 
Sbjct: 278 LMG 280


>gi|315614725|gb|EFU95365.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Escherichia coli 3431]
          Length = 297

 Score = 70.3 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 87/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +       +
Sbjct: 1   MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 60

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
                    +++                     +   I  I           +    R  
Sbjct: 61  LVAAGFVGAIVIASAYGWSIEQVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGSRDV 120

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L +            +           + +       ++ +++R + +  A R   ++ 
Sbjct: 121 ALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRACRACAEDL 180

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +AG         I+P    F   +   +  +LGG
Sbjct: 181 KMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 239

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        IL     L        +  ++ F               L LV+L+   
Sbjct: 240 IGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLILVLLVMPT 286

Query: 338 SLLRL 342
            +L  
Sbjct: 287 GILGR 291


>gi|121611724|ref|YP_999531.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121556364|gb|ABM60513.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 313

 Score = 70.3 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 89/302 (29%), Gaps = 26/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M A GL+++ G +G+++L     Y +GAY    L   +G   W +   
Sbjct: 36  LLNSVQYGLVLFMLAAGLTLIFGIMGVVNLAHGSFYMLGAYLAYALTGYFGSLAWAIAVG 95

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +       +  L    F         L+   +          +               
Sbjct: 96  AVLAMVFGLALEWLLFRHFHCRDHLDQVLLTFGLIYIFEDLRSILWGDAVHGVAIPEPLA 155

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +             + Y ++  ++      L+  + L + +T +    R    N  
Sbjct: 156 ASIPLTD----------ILSYPLYRLFICGICLALALGLYLLIAKTRLGMKIRAGASNPD 205

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L           FA+      +AG   A             S  I+   +V++GG+
Sbjct: 206 MAQALGVNTRLIHSIVFALGVTLAMVAGMAMAPVSSV--YPGMGSSVLIMCFVVVVIGGI 263

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     +  ++  V      +                     L+ + +  V+L +   
Sbjct: 264 GSVRGAFISALLVGLVDTFGKVL--------------LPQIAGMLVYMLMAAVLLYKPEG 309

Query: 339 LL 340
           L 
Sbjct: 310 LF 311


>gi|288957399|ref|YP_003447740.1| branched-chain amino acid ABC transporter permease protein
           [Azospirillum sp. B510]
 gi|288909707|dbj|BAI71196.1| branched-chain amino acid ABC transporter permease protein
           [Azospirillum sp. B510]
          Length = 615

 Score = 70.3 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 50/305 (16%), Positives = 123/305 (40%), Gaps = 33/305 (10%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y   +  +++I  +FA  L +++G  GL+S      + +GAY   +L    G  + L +
Sbjct: 330 DYALILLTEVVILALFAASLHLLIGLGGLVSFGHAAWFGLGAYGSALLVKHLGAPMPLAL 389

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + +++G   ++ G   ++  G Y A+ TL  ++I  ++  +W  +T G  GI      
Sbjct: 390 AGAPLLAGIGALVAGWFCVRRSGLYFAMLTLAFAQIVWSVAFQWYAVTGGDNGILGV--- 446

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                          +PS +   +   Y++ L +C  +  ++          A R  RD+
Sbjct: 447 ---------------WPSGWAAGKAAYYWLTLALCGGALWLLRRTAFAPFGYALRAGRDS 491

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                S+   +   +  AF ++ +  G+AG  +A ++  + P +    +++  + +V++G
Sbjct: 492 ALRAESVGIDVRRFQWMAFVLAGSAAGLAGGLYAFAKGSVFPSLLAVPQSVDALVMVLMG 551

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +++           +      +  ++  S               + + +  ++L   
Sbjct: 552 GLQTVAGPLAGAVAFHLLEAKVMSLTDWWRLS---------------LGLTIVALVLAFP 596

Query: 337 HSLLR 341
             ++ 
Sbjct: 597 KGIVG 601



 Score = 63.0 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 96/310 (30%), Gaps = 29/310 (9%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLI 96
            S         + + GL+IV G   +++      Y +GAY+   L  R+       W  +
Sbjct: 9   LSGLATAATLFLVSSGLTIVFGVTRIVNFAHGSFYMVGAYAGWSLIERFGGTPAGFWGSV 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +A+++G  G +M +  L+       +  L+ +     ++        G          
Sbjct: 69  AAAAVLTGVMGAVMEIGLLRRLYRSPELFQLLGTFGVVLVVQDLTAWIWGP--------- 119

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                  R+             + ++   ++     +   + L   RT      R    +
Sbjct: 120 -EDLLGRRAPGLKGSVDILDQPFPLYDLVLIGLGPLVLGLLWLLFNRTRWGTLVRAATQD 178

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +L             +  A  G+ GA                     V+ +  +G
Sbjct: 179 REMASTLGVDPARLFTGVLVLGCALAGLGGALQVPREAVTLHMDMAIVVEAFVVVV--VG 236

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM SL+    A+ ++  +                     F      ++ + + +V+++R 
Sbjct: 237 GMGSLTGAFLASLLIGQLQAFGI--------------LVFPQITLVIVFLFMAVVLVLRP 282

Query: 337 HSLLRLRTPS 346
           H LL     +
Sbjct: 283 HGLLGRAEET 292


>gi|163731683|ref|ZP_02139130.1| inner-membrane translocator [Roseobacter litoralis Och 149]
 gi|161395137|gb|EDQ19459.1| inner-membrane translocator [Roseobacter litoralis Och 149]
          Length = 285

 Score = 70.3 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 53/303 (17%), Positives = 104/303 (34%), Gaps = 27/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +YV+ A GL+ V G LG+           G Y      + +G  +   I V
Sbjct: 8   IINGVAIGGVYVLIALGLTTVFGILGIAHFAHGSVSMFGGYLTFFFVTSWGFPLLFAILV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G+++ L + +   +   I   I++     ++        G   + +   L  
Sbjct: 68  ALIVGLVLGVLIELLAYRPVRNANHINAFIVALGLTMMVEGLNLEFFGHEQVVIPTDLSR 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +            F    V       YV+L    L  ++ L++ +T    A R + +N+ 
Sbjct: 128 V------------FNVGGVTIPELRLYVILAAALLIIAMTLFVEKTKTGQAIRAVAENRD 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    L  FA+S+A    AG    +                   +++ILGG+
Sbjct: 176 AAILMGVNVNTIPLVVFAISTALGVCAGVMVGSLFAIAPGIGEGLVVKG--FAVLILGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L     L  G     +  ++ F             + +  V+L R   
Sbjct: 234 GSIPGAVVGGLVLGITEALAAGFISSAYKDVIAF-------------VVMIGVLLFRPQG 280

Query: 339 LLR 341
           L+ 
Sbjct: 281 LMG 283


>gi|300312237|ref|YP_003776329.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300075022|gb|ADJ64421.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 293

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 116/305 (38%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y +FA G ++V G LG+++L+    + +G+Y+ ++L  +  L +W+ + +
Sbjct: 6   LINALSLGSVYALFALGFTLVFGVLGVINLSHGAIFMLGSYAALLLVEQMALPLWVALLL 65

Query: 99  SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           + + +G  G+I+ +       + +   +  +I +     ++        G          
Sbjct: 66  AMVATGLLGLIIDVLVLKPLRKRNAPHLIPMIATIGVAIMITNISQGLFGAENKRFP--- 122

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                  +  I         +        +++    L   ++  +R+T +  A R I ++
Sbjct: 123 -------QGTIPEESVSLGNLHITAVQVAIIVIAFVLMVVLLGVMRKTQLGRALRAIAES 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            KA + L   +    L     ++A  G AG     S + ISP M +   +  + +++ILG
Sbjct: 176 PKAAYLLGINVEGLFLLTSFAAAALGGAAGVLVGVSFNAISPFMGQPMLHKGI-AVIILG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM  +         L     L        F   + F               LFL++L++ 
Sbjct: 235 GMGDIRGAMIGGLFLGFAEVLTVAYISSDFRDAVAFG-------------LLFLILLVKP 281

Query: 337 HSLLR 341
             +  
Sbjct: 282 SGMFG 286


>gi|163855964|ref|YP_001630262.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella petrii DSM 12804]
 gi|163259692|emb|CAP41993.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella petrii]
          Length = 320

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 92/312 (29%), Gaps = 35/312 (11%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            IY +   GL+++ G + +++        +G Y                 P+   +S   
Sbjct: 23  GIYGLMCVGLAMIFGIMRVINFAQGDFMMLGMYITYFFFVLLAGHGMAGSPLGPYVSMVL 82

Query: 107 GMIMGLPSLKFRGDYL----------------AIATLIMSEIFQNILIKWKPITNGKAGI 150
            + +           L                  A LI++     +L     +  G    
Sbjct: 83  TLPVMYAVGYLAHRLLISRVTGGKSAALEGEGHYAQLILTLGIALVLQNGAMMVFGPELE 142

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +   L      +  L          V       Y  L       ++ L + R+ +  + 
Sbjct: 143 SIRTPLSSSAWEIGPL----WGDFVSVFVNKGRGYAALISVAAIVALALVVARSRLGKSL 198

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   DN  A   +   +  A   AFA+ +    +AG   A +              I++ 
Sbjct: 199 RAAADNPVAASYMGIDVDRAYRVAFALGTCITALAGGLLATNFPF--HPFVGLEFVIVMY 256

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           + V+LGG+ S+        ++  V +L   +      +               + +   L
Sbjct: 257 AGVVLGGIGSILGAFWGGMVIGLVQQLSSLVLPTQLQNAA-------------IFVFFLL 303

Query: 331 VILMRSHSLLRL 342
           ++++R   L   
Sbjct: 304 IVILRPQGLFGR 315


>gi|85704487|ref|ZP_01035589.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. 217]
 gi|85670895|gb|EAQ25754.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. 217]
          Length = 394

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 49/362 (13%), Positives = 98/362 (27%), Gaps = 36/362 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L  +   +L    G       +  +    L   + A  + +V G  G+LSL     + 
Sbjct: 26  LALFTLGVTVLSEGFGLAILSTSMVKILGMTLCLCLIAVAMDVVWGYCGILSLGHFAFFG 85

Query: 76  IGAYSYVILGSRYGLSIWLL-------------------------------IPVSAMISG 104
           +G Y+  +          ++                               +P     + 
Sbjct: 86  LGGYAVGMWLMYARTEGIVISSLSGAPIPPTQGEIENAIATQIFGVVGSNELPWLWGFAH 145

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
           +  + + +  L      L    L        + +         A      +         
Sbjct: 146 SLTLQLMMVVLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLYLFQNDTGLRGNN 205

Query: 165 SLIRFFRFPSSF----VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
            L      P           ++ ++       L   +  WL      +  R IRDN+   
Sbjct: 206 GLSGLQNIPGLDHLPQSTLSLWFFWASALALGLGYLLFAWLVSGKFGSVIRAIRDNEARV 265

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             L   +   KL  F +++    +AGA +      I+P       +I +   V +GG   
Sbjct: 266 RFLGYDVESYKLVIFTLTAVVSAIAGALYYPQAGIINPAEIAPIASIYLAVWVAIGGRGR 325

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L       A++        G       +L  +  ++      L+ +    V L     + 
Sbjct: 326 LYGAVIGAAVVSLASSWFTG-GGALNINLGIYTINWTDWWLVLLGLGFVAVTLFFPRGIG 384

Query: 341 RL 342
            L
Sbjct: 385 GL 386


>gi|148258849|ref|YP_001243434.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. BTAi1]
 gi|146411022|gb|ABQ39528.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 336

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/298 (13%), Positives = 92/298 (30%), Gaps = 16/298 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAM 101
               ++  + A GL++V G + +L+       A+GAY   ++            +  +  
Sbjct: 48  LAMGMMIFIMASGLTLVFGLMDVLNFGHGAFIAVGAYVATLVLLPLASWAQADSLLANLA 107

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           +     ++    +         +  L +       ++              A     +  
Sbjct: 108 VLVPAALLSMGVTAALGLVVERVLVLPVYGQHLKQILMTTGGLIVAEQTLYALFGPQIIP 167

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F    +    +    +L    +  +I L L RT I    R   +N++   
Sbjct: 168 LPVPAALRGSFIIGDIAIAKYRLLAMLIGFAIFVAIELVLNRTKIGLLIRAGVENREMVE 227

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           +L   I    L  F   SA  G+ G  +   R+++          ++V  +VI+GG+ S+
Sbjct: 228 ALGYRIRRLFLGVFMTGSALAGLGGVMWGLYREQV-HASIGDELTVLVFIVVIIGGLGSI 286

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           +       ++  V      +                       ++ +  V++ R   L
Sbjct: 287 TGCFIGAILVAMVANYGGFL--------------VPKLALVSNILLMVAVLMWRPRGL 330


>gi|254699315|ref|ZP_05161143.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella suis bv. 5 str. 513]
 gi|261749758|ref|ZP_05993467.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261739511|gb|EEY27437.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
          Length = 315

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 53/324 (16%), Positives = 105/324 (32%), Gaps = 38/324 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             +     +        +   +  +    LI    A   +I+ G  G  S    + Y +G
Sbjct: 6   ALLAIIAAVLALGAPLFASPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGLG 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   I   ++ L  +    +  + +    M++GLP L+ +G Y AI TL + ++   I 
Sbjct: 66  AYGAGIAMVQFNLPFFAGAAIGIVAAVVFAMLIGLPILRLKGHYFAIVTLALPQVMAAIT 125

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                                    V             +  + F Y   L +  ++  +
Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L R+        IR+N++   ++       K+ A  +S AF  MAGA  A     + 
Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMGINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222

Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P+       N+ +I + + GG  ++         L  V                    ++
Sbjct: 223 PEAAYQVQLNVQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLST--------------AY 268

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
                    I + + +++    L 
Sbjct: 269 TDVAGMFFGIVIVVAVVLMPRGLA 292


>gi|67923798|ref|ZP_00517260.1| inner-membrane translocator [Crocosphaera watsonii WH 8501]
 gi|67854341|gb|EAM49638.1| inner-membrane translocator [Crocosphaera watsonii WH 8501]
          Length = 294

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 84/292 (28%), Gaps = 12/292 (4%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
           + + + +      +  + A GL++  G L L +        +GAY   +L S+    +  
Sbjct: 10  TAQNLFNGLAIGSVIALAAVGLTLTCGILRLSNFAHGDFMTLGAYLTWLLNSQGLNLVLS 69

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
            I  +     A  +   L     R       TLI+  I   + ++   +    A     D
Sbjct: 70  AILGAGGTIFAMLVSEYLLWKPMRNRRATSTTLIIISIGLALFLRNGILMIWGANNQRYD 129

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                                 +       + +         + L L+RT I  A R + 
Sbjct: 130 VPIIPAQ-----------EIFGLRLATDRIWAIALAVVAIVILHLVLQRTKIGKAMRAVA 178

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           DN          +    L  + +++    + G         I      +   + + + VI
Sbjct: 179 DNIDLARVSGINVEQVVLWTWIITAILTTLGGVMLGLITSTI-RPNMGWFLILPMFASVI 237

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           LGG+ +         ++    EL        +   +       +       I
Sbjct: 238 LGGIGNPYGAIAGGLVIGVAQELSVPWLGTDYKLGVALLIMILILLIRPQGI 289


>gi|298292889|ref|YP_003694828.1| inner-membrane translocator [Starkeya novella DSM 506]
 gi|296929400|gb|ADH90209.1| inner-membrane translocator [Starkeya novella DSM 506]
          Length = 311

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 56/306 (18%), Positives = 121/306 (39%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-SRYGLSIWLLIP 97
             ++ + I + +  +    +V+   G +S    + YA GAY+   L  +R  L   +LIP
Sbjct: 24  WTTVMLTIALAIGLSVLAIVVLLRAGQVSFGHGLYYATGAYTVAFLVKARLSLDALILIP 83

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           +  +++    +  G  ++++R  + A+  L +S +  ++L K   IT G  G+ VA    
Sbjct: 84  LGGLVAMLIAVAFGFFAVRYRDIFFAMINLAISMVAFSLLEKLYHITGGGDGMNVARP-- 141

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                                +E +M+Y  L +  L+  ++     + +  A   ++ N+
Sbjct: 142 ----------TLGGGRLDRAAFEAWMFYATLAIAALAGLLVTRYLASPLGRALEAVKSNE 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                L  +       A+A+S+A  G++GA  A     ++P+   +  +   + I ILGG
Sbjct: 192 MRLEYLGVSGNHVLHVAYAISAALAGVSGAIIAIVNGHVAPEFAYWVRSGEFVFIAILGG 251

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
             ++      + +   +      +                    T + ++L  +I+    
Sbjct: 252 AGNVLGAFAGSMVFEAIRNHAAALA--------------ADYWQTTLGLSLIAIIMFAPD 297

Query: 338 SLLRLR 343
            L +LR
Sbjct: 298 GLTQLR 303


>gi|254706442|ref|ZP_05168270.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella pinnipedialis M163/99/10]
 gi|254711270|ref|ZP_05173081.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella pinnipedialis B2/94]
 gi|254711871|ref|ZP_05173682.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella ceti M644/93/1]
 gi|254714940|ref|ZP_05176751.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella ceti M13/05/1]
 gi|256030101|ref|ZP_05443715.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella pinnipedialis M292/94/1]
 gi|256158272|ref|ZP_05456181.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella ceti M490/95/1]
 gi|256252787|ref|ZP_05458323.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella ceti B1/94]
 gi|261216632|ref|ZP_05930913.1| inner-membrane translocator [Brucella ceti M13/05/1]
 gi|261219867|ref|ZP_05934148.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261313893|ref|ZP_05953090.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261318866|ref|ZP_05958063.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261319501|ref|ZP_05958698.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|265987129|ref|ZP_06099686.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|265996791|ref|ZP_06109348.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|260918451|gb|EEX85104.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|260921721|gb|EEX88289.1| inner-membrane translocator [Brucella ceti M13/05/1]
 gi|261292191|gb|EEX95687.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261298089|gb|EEY01586.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261302919|gb|EEY06416.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|262551088|gb|EEZ07249.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|264659326|gb|EEZ29587.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
          Length = 310

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 106/324 (32%), Gaps = 38/324 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             +     +        +   +  +    LI    A   +I+ G  G  S    + Y +G
Sbjct: 6   ALLAIIAAVLALGAPLFASPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGLG 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   I   ++ L  +    +  + +    M++GLP L+ +G Y AIATL + ++   I 
Sbjct: 66  AYGAGIAMVQFNLPFFAGAAIGIVAAVVFAMLIGLPILRLKGHYFAIATLALPQVMAAIT 125

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                                    V             +  + F Y   L +  ++  +
Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L R+        IR+N++   ++       K+ A  +S AF  MAGA  A     + 
Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMGINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222

Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P+       N+ +I + + GG  ++         L  V                    ++
Sbjct: 223 PEAAYQVQLNVQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLST--------------AY 268

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
                    I + + +++    L 
Sbjct: 269 TDVAGMFFGIVIVVAVVLMPRGLA 292


>gi|229826661|ref|ZP_04452730.1| hypothetical protein GCWU000182_02037 [Abiotrophia defectiva ATCC
           49176]
 gi|229789531|gb|EEP25645.1| hypothetical protein GCWU000182_02037 [Abiotrophia defectiva ATCC
           49176]
          Length = 549

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/317 (9%), Positives = 85/317 (26%), Gaps = 12/317 (3%)

Query: 15  LCLLAVVYPLLLFLFLGA---TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
           + L+ +   ++  +  G      +   + ++  Q    +  A G++ ++   G   L+  
Sbjct: 227 IILIFIGLSIITPMLKGPQTHLLTYNNVLNVLQQASPKMFLALGVAGLILLTG-TDLSIG 285

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               +G     I+  +   +    +   A       ++  +         L      ++ 
Sbjct: 286 RMIGMGMTVATIIMHQGVNTG--QVFGHAFDFTGLPVVARVVLALVVCIILCTFFTSIAG 343

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            F         I+     + +     +    V         P   +        ++L   
Sbjct: 344 FFTAKFKMHPFISTMANMLVIFGLATYATKGVSFGAIESNIPDIIIPKLNGFPTIILWAV 403

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
              A +     +T        +  N +A  +   ++    L AF ++    G       A
Sbjct: 404 AAIAVVWFIWNKTPFGKNLYAVGGNPEAASASGISVFAVTLGAFILAGILYGFGAWLECA 463

Query: 252 SRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYY 305
                    +     +  I+  ++      GG+  +S +     I   +      +    
Sbjct: 464 RMVGSGSAAYGQGWEMDAIAACVVGGISFTGGIGKISGVVVGVLIFTALTYSLTILGIDT 523

Query: 306 FNSLLKFDCSFNMRHTT 322
               +       +  T 
Sbjct: 524 NLQFVFEGIIILVAVTL 540


>gi|146343654|ref|YP_001208702.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. ORS278]
 gi|146196460|emb|CAL80487.1| Putative branched-chain amino acid ABC transporter, permease
           protein [Bradyrhizobium sp. ORS278]
          Length = 308

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 91/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   +YV+ A GL+I+ G +G++++       +GAY   +  + +   +  L P    +
Sbjct: 22  LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTWMTSNAFQNFLPSLFPGYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           + A   +              +   +       +L  W      +           +G  
Sbjct: 82  AMALAFVASGSLGMLVEWA--MIRRLYKRPLDTLLATWGLSLILQQAYRSVFGAREVGVE 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +      +  +   I   +V+     ++  +   L  +      R +  N+    +
Sbjct: 140 LPEWMMGSWQATDSIQIPINGMFVMCLTILITIVVAYVLFLSRWGRQVRAVVQNRVMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           F +     G+AG+ F       +         +    +V+ GG  SL 
Sbjct: 200 VGINTEKVDRYTFGLGCGIAGVAGSAFTMIGS--TGPTAGQLYIVDTFLVVVFGGAASLL 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++A+  ++++R   L  L
Sbjct: 258 GTIASAFTISQAQSTMEFFMSGSMAK-------------VLTLLAIVAILMLRPQGLFAL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|260433715|ref|ZP_05787686.1| branched-chain amino acid ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417543|gb|EEX10802.1| branched-chain amino acid ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
          Length = 336

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 85/312 (27%), Gaps = 19/312 (6%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW---------LLIPVS 99
             + A G++++ G L   +       A GA   V++      +           L +P +
Sbjct: 25  LALGALGVTLIYGILRFSNFAHGDTMAFGAMIAVLVTWGLQAAGITFGPLPTALLALPFA 84

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +   A  +I      +F  D  A   +++      + I    +                
Sbjct: 85  ILGCIALVLITDRLVYRFYRDQKAKPVILVIVSMGVMFIMNGLVRFIIGPDDQRFSDGAR 144

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                   +        +  +      ++      A +  +L +T    + R   DN+  
Sbjct: 145 FVISARDFKALTGLDEGLAIKTSQGITVIVAIVAVALLFWFLNKTRTGKSMRAYSDNEDL 204

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                       +  + + +A    AG  +   +         F   + + +  I+GG+ 
Sbjct: 205 ALLSGINPERVVMITWIIVAALATTAGVLYGLDKSF--KPFVYFQLLLPIFASAIVGGLG 262

Query: 280 SLSKIAKATAILIGVVE--------LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +         I+             +   +                     +  + L +V
Sbjct: 263 NPIGAIAGGFIIAFSEVTITYAWKKVLVYLLPDSLEPSGLVQLLSTDYKFAVSFVILLIV 322

Query: 332 ILMRSHSLLRLR 343
           +L +   L + +
Sbjct: 323 LLFKPTGLFQGK 334


>gi|222099341|ref|YP_002533909.1| Monosaccharide-transporting ATPase [Thermotoga neapolitana DSM
           4359]
 gi|221571731|gb|ACM22543.1| Monosaccharide-transporting ATPase [Thermotoga neapolitana DSM
           4359]
          Length = 338

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/316 (12%), Positives = 94/316 (29%), Gaps = 28/316 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           ++  +      +     ++  Q+ + ++ A   ++V+ S G + L+     A+G     +
Sbjct: 36  IVFSVLSPYFFTISNWLNILRQVSVLLILASAQTMVIISAG-IDLSVGAILALGGCLAAV 94

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
             S +G +  L   +   ++   G   G    K R      ATL M    + + +     
Sbjct: 95  AMSYWGWNFLLGSLLGVAVATLVGFFNGSIITKGRIPDFI-ATLGMLGAVRGVALLITG- 152

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
                             T                    +    L    +       L R
Sbjct: 153 --------GLPVPSHFTATALKGYLPEALIWLGSGDIGPVPVPALVALIMVLITWFVLSR 204

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +  +   +  N++A       +   K   + +S  + G+AG       +  +  M + 
Sbjct: 205 TCLGRSIYAVGGNREAARESGINVDKVKTIVYTLSGLYAGIAGLVMVGRMNSANALMAEG 264

Query: 264 SENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            E   + ++VI      GG  S+        ++  +      ++                
Sbjct: 265 IELNTIAAVVIGGTNLFGGEGSVLGTLIGALLIGVLSNGLNLLD------------VEPF 312

Query: 319 RHTTLMVIALFLVILM 334
               +  + + ++++ 
Sbjct: 313 WQKVINGLLIIIIVVF 328


>gi|114765330|ref|ZP_01444447.1| branched-chain amino acid ABC transporter, permease protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114542310|gb|EAU45339.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. HTCC2601]
          Length = 336

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/334 (10%), Positives = 87/334 (26%), Gaps = 19/334 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           FL      +               + A G++++ G L   +       AIG    +++  
Sbjct: 3   FLNALVALANFVFIPAIAYGSQLALGALGVTLIYGILRFSNFAHGDTMAIGTMFTILVTW 62

Query: 87  RYG---------LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
                        +  L IP   +++    +       +F  +  A   +++      + 
Sbjct: 63  GLQALGVSFGPLPTALLAIPFGIVLTSLLVLGTDRLVYRFYREQKAKPVILVIVSMGVMF 122

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I                             +        +  +      ++    + A +
Sbjct: 123 IYNGLTRLIIGPGDQNFADGERFLISARDFKTMTGLDEGLALKSTQAITVVVAILVVALL 182

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L  T    + R   DN+              +  + + +A   +AG  +   +    
Sbjct: 183 FWFLNHTRTGKSMRAYSDNEDLALLSGINPERVVMVTWIIVAALAVVAGTLYGLDKSF-- 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309
                F   + + +  I+GG+ S         I+             +   M        
Sbjct: 241 KPFTYFQILLPIFASAIVGGLGSPLGAIAGGFIIAFSEVGITYAWKKVLTYMLPESLEPS 300

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                        +  + L +V+L R   L + +
Sbjct: 301 GLVQLLSTDYKFAVSFVILIIVLLFRPTGLFKGK 334


>gi|222035163|emb|CAP77908.1| High-affinity branched-chain amino acid transport [Escherichia coli
           LF82]
 gi|312948010|gb|ADR28837.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli O83:H1 str. NRG 857C]
          Length = 308

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y I +Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMISSYVSFMIIAALMMLGIDTGWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|325523310|gb|EGD01664.1| inner-membrane translocator [Burkholderia sp. TJI49]
          Length = 345

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/326 (11%), Positives = 97/326 (29%), Gaps = 18/326 (5%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           S F     +   +     ++  +              + ++     +  + A   + V+ 
Sbjct: 25  SRFFNPAARQKLLAFASLMLLIVFFSFASSNFLEVDNLVAILQATAVNGVLAVACTYVII 84

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           + G + L+        A    ++ + +G+ + L I  + +     G + G    K +   
Sbjct: 85  TSG-IDLSVGTLMTFCAVMAGVVLTNWGMPLPLGILAALLFGALSGCVSGFVIAKMKVPP 143

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                           +    +  G + +    R  +   T              +I  +
Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQDSLIGNLIPAL 191

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +   +L +  ++    + L RT        +  N++A       +   K++ +  S   
Sbjct: 192 PIPNAVLILFLVAIGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGTV 251

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+AG   A+  +   P + +  E   + ++VI      GG  S+        I+  +  
Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTN 311

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               M+       +       +    
Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYV 337


>gi|207722108|ref|YP_002252546.1| transmembrane protein [Ralstonia solanacearum MolK2]
 gi|207744837|ref|YP_002261229.1| transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|206587282|emb|CAQ17866.1| transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206596247|emb|CAQ63174.1| transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 301

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 108/315 (34%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y M + GL+++ G L +++      + +GA    +  S
Sbjct: 10  IFGVPLPAMLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLTWMGLS 69

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              L  W+++  + +  GA GM++    L+F      +  L+++     ++        G
Sbjct: 70  YLDLPYWVMLVAAPLAIGAVGMVIERTMLRFIYKLDHLYGLLLTLGVTLVIEGVFRAIYG 129

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+  +      G T             F++   +  +V++    +  +    + +T +
Sbjct: 130 VSGLPYSTPELLSGAT----------DLGFMVLPNYRAWVVVASLTVCFATWFLIEKTKL 179

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +   +  
Sbjct: 180 GAYLRAGTENPKLVEAFGVNVPLMVTLTYGFGVALAAFAGVLAAPVIQI--SPLMGQNMI 237

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+         L  +  L                  +    +T++ +
Sbjct: 238 ITVFAVVVIGGMGSILGSIITGLGLGVIEGLTKVF--------------YPQASSTVVFV 283

Query: 327 ALFLVILMRSHSLLR 341
            + LV+L+R   L  
Sbjct: 284 IMALVLLVRPAGLFG 298


>gi|192292930|ref|YP_001993535.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|192286679|gb|ACF03060.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 433

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 46/328 (14%), Positives = 113/328 (34%), Gaps = 32/328 (9%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +   L+ L L    +     +    + I ++FA   +I++G  G+LS    + Y +G 
Sbjct: 24  LWIATALVLLLLPKLFASGGSLTTFSLVGISIIFALSYNILLGQTGMLSFGHAVYYGLGG 83

Query: 79  Y-----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           +       ++  +++ + +  +  +          ++G    +  G   A+ +L ++E+ 
Sbjct: 84  FLAIHTINILGFNKWPIPLPFVPLIGGFAGLFFAALIGWVMTQRSGTAFAMISLGLAELV 143

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
            +  +  +    G+AGI              +  + F+        +I +YY++     +
Sbjct: 144 ASSALILRSFFGGEAGIS------------ANRTKLFKVFGLSFGPQIQIYYLVAAWTLI 191

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +   +  L RT +      +RDN +    +       +  AF  S  F G+AGA  A + 
Sbjct: 192 AIIAMYALTRTPLGRMCNAVRDNPERVQFVGYDPHVVRYLAFCFSGFFAGIAGALAAINF 251

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           +  +       ++  V+    +GG+            +  +  +   +            
Sbjct: 252 EIANSAYLGAVQSGTVLFAAYIGGIGFFIGPIVGAIFVTVLSLVLSDL------------ 299

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                       +   +V+L     +  
Sbjct: 300 ---TQVWQLYFGLFFIIVVLFAPGGITG 324


>gi|86609532|ref|YP_478294.1| hydrophobic amino acid ABC transporter permease [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86558074|gb|ABD03031.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 289

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 95/299 (31%), Gaps = 28/299 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   IY + A G+S+  G L   +        +GAY + +     G  I + +  +A+ 
Sbjct: 12  LVLGSIYALGAIGVSLTFGILRFANFAHGDLMTLGAY-FGLTFVGLGWPIGVSLLPAALA 70

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +  C + +     +       +  LI S     IL     I  G         +      
Sbjct: 71  TVLCAVGIDQLIYRRLRREAPVILLISSFGTALILRSLVQIIWGPNNQVYRSGIQLP--- 127

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                    +    +  +     +L G   L  ++ L+L+RT +  A R + DN +    
Sbjct: 128 ---------WRLGELRIKPDWAVILAGTALLVVALHLFLQRTRVGKAMRAMADNFELAKI 178

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                    L  +A+ +A    AG F              +   + + +  ILGG+    
Sbjct: 179 TGIDTERIVLWTWAIGAALACAAGVFLGMDTRL--HPTMGWRLLLPIFAAAILGGIGRPY 236

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  ++    E    +    + + + F               L L+++ R   LL 
Sbjct: 237 GAIAGGVVIGLAEEFSTLVINPAYKTGVAF-------------AILVLLLIFRPTGLLG 282


>gi|56709082|ref|YP_165127.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56680767|gb|AAV97432.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 326

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 63/336 (18%), Positives = 131/336 (38%), Gaps = 20/336 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            +    I   + +    +    +     +         + +  + + G+ +    +G ++
Sbjct: 4   FSSKQLIGTGIFLFAIFIGVPLVIGATGRWDFYFTLTSVALLAIASAGVWLTF-YIGRIN 62

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           +       IGAY   IL  + G S W+ +P + + +    +++GLP L+ RG Y A+ TL
Sbjct: 63  IGQGAFALIGAYVSAILVVKAGWSFWITLPAAGLFAAIVAILVGLPILRLRGVYFAMITL 122

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           +++++     +    ITNG  GI        L      LI  F    +    ++  Y   
Sbjct: 123 VLTQVVTLTALALP-ITNGAKGISNIPLPSGLSILGIPLIPDFGAMEN---TKLAFYLTA 178

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +   + + +  L  + + +  R+++ N++   S+   I + ++  FA+SS F G+ GA
Sbjct: 179 CILMVATYAALYRLVNSRLGHLCRSMQQNEELASSIGVNIAYIRIVIFAISSFFGGIGGA 238

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            F A    + P  F  ++++  +    LGG+  +      T +L    +L          
Sbjct: 239 MFGAIAQSVYPSTFVVADSVNFMLNCFLGGLGYVFGPMLGTLVLYFGWDLL--------- 289

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                          +  + L  VI    + LL +R
Sbjct: 290 ------FEIGKYQMLVYSMILIAVIRFLPNGLLSVR 319


>gi|78064745|ref|YP_367514.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia sp. 383]
 gi|77965490|gb|ABB06870.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia sp. 383]
          Length = 294

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 105/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +GL  W ++ ++ ++ GA G+++    L++      +  L+++     ++        G
Sbjct: 63  YFGLPYWAMLVIAPLVVGAFGILIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 123 SSGQPYDVPSQLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +                     +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSIVTGLLLGVIEGFTRVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L R   L  
Sbjct: 277 IMAIVLLFRPAGLFG 291


>gi|119386635|ref|YP_917690.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119377230|gb|ABL71994.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 446

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 53/284 (18%), Positives = 103/284 (36%), Gaps = 20/284 (7%)

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +        G  + L  PV A+ + A    +G  +L  R DYLAIATL + EI   ++  
Sbjct: 163 ARAGNIGGLGWPVLLSWPVGALFAAAAAWGVGKVALGLRSDYLAIATLGIGEIIVAVMRN 222

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
            + ++ G   +    R       ++S   F    + + +       + + + +      +
Sbjct: 223 EEWLSRGVKNVSGIPRPVPYELELQSSPDFVARAAEWGLSPAVASGIWVKLLYAGLFGAV 282

Query: 200 WLR---------RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
            L          ++      R IRDN+ A  ++   +    L  F + SA IG+AGA   
Sbjct: 283 LLGLILLAELALKSPWGRMMRAIRDNETAAEAMGKDVTRRHLQIFVIGSAVIGLAGAMMV 342

Query: 251 ASRDRISPDMFKFS-ENIIVISIVILGGMTSLSKIAKATAILIGV--------VELCCGM 301
                +SP+ F       ++  +VI+GG  +    A    ++  +         E    +
Sbjct: 343 TLDGLLSPNSFNPLRYTFLIWVMVIVGGSGNNWGAALGAILIWFLWIKAEVWGPEFMRLV 402

Query: 302 NFYYFNSLLKFDCSFNMRHTTLM--VIALFLVILMRSHSLLRLR 343
                   L+     +  H   +   + L L++      L+  +
Sbjct: 403 TGPLPAGALRDHLLGSAPHMRFIALGVVLLLMLRFAPRGLVPEK 446



 Score = 38.7 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
            + S     ++    LI  + A G+++  G  GL +   V   A+G  + V++ +     
Sbjct: 37  FSGSWNTALAILNMGLISAVMALGVNMQWGYAGLFNAGVVGFLALGGLAPVLVSTAPVQG 96

Query: 92  IWLLIPVSAMIS 103
            W       +++
Sbjct: 97  AWAAGGPRVILA 108


>gi|323700226|ref|ZP_08112138.1| inner-membrane translocator [Desulfovibrio sp. ND132]
 gi|323460158|gb|EGB16023.1| inner-membrane translocator [Desulfovibrio desulfuricans ND132]
          Length = 303

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 89/290 (30%), Gaps = 1/290 (0%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           + I +       Y + A G ++V G L L++      + +GAY    +          L 
Sbjct: 6   QNIINALQWGSFYALIALGYTLVYGVLRLINFAHGDIFMVGAYIAFFVAGFLLGPAIGLS 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P +  +      +     +    + +A   L      +  ++    +            L
Sbjct: 66  PFATFLLAVPLTMFLTACVGVTLERIAYRPLRRKGAHRLYVVITALMCGLILEYSNLAVL 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                    L++   +    V        V+     +   +   + +T I  A R I  +
Sbjct: 126 GASRLKFPELVQKSVWNLGGVTVTNLKVIVIFAAIAVFIILNFIVTKTKIGMAMRGISYD 185

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   I    +  F + S F G+AG  FA S   + P M         I+ V+ G
Sbjct: 186 KFAIPLMGIPIDQIIVFTFILGSGFAGLAGLLFAMSYPVLEPFMGMLIGWKAFIAAVV-G 244

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           G+  +        +L  +      +    +  L  F     +       +
Sbjct: 245 GIGDIRGAFYGGFLLGFIEVGVVTVFPSTYRDLFAFTILLIILWMKPTGL 294


>gi|312141044|ref|YP_004008380.1| branched-chain amino acid ABC transporter transmembrane protein
           [Rhodococcus equi 103S]
 gi|311890383|emb|CBH49701.1| putative branched-chain amino acid ABC transporter integral
           membrane subunit [Rhodococcus equi 103S]
          Length = 766

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 84/292 (28%), Gaps = 8/292 (2%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +     +   +Y + A GL +   + G+ +        +GA+ Y      + L   L +
Sbjct: 6   TFTILGLVLGSVYAIAASGLVLTYNTSGIFNFAHGAQAMLGAFLYWQFRYGWDLPTPLAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++  ++G        P +      L +  L  +     I++    +  G +  +     
Sbjct: 66  LLTIGVAG--------PLMGLLLYALIMRGLRDTAEVTKIVVTVSILLGGVSLSHWFWHP 117

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
               T         RF        +     L+    ++  +     RT +  + R + D+
Sbjct: 118 EEPRTVKMFFGDESRFSFFGATVHMHEVICLVAAVLIAVGLRFLFTRTRLGVSMRGVVDD 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                            ++A+ S    +AG                    I   +  + G
Sbjct: 178 PDLLRLNGHNPERIAAFSWALGSTLAVVAGILITPISGGTLEANLLTLLVIDAFAAAMFG 237

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
            + S+ +      +L        G     +        S  M    +++I L
Sbjct: 238 RLRSIPRTFVGAIVLGLAGTYVLGYFPSEWTWTSNLRVSLPMIALFVVLIVL 289



 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 110/286 (38%), Gaps = 10/286 (3%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            +A    LL+ +++      +   +     + + + A  L+++ G  G ++L  V   AI
Sbjct: 313 AVAWGAALLVIVYMIRLLMVESAITTLTLGMSFAIIALSLTLLTGYAGEMNLAVVSFGAI 372

Query: 77  GAYSYVILGSRY----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
                   G+             + +  +++   G ++ LP+L+ RG YLA+AT+     
Sbjct: 373 STIVAYHFGTSGSGLATRLTLWGLIIGTLVAAVIGGLVALPALRLRGLYLALATMAFGVF 432

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             N++++            +    + L T     I   +     +  +      +  +  
Sbjct: 433 LSNMVLR------DTTEHELFGVKFSLFTGGSLSIPPLKVGPLDLSNQTAFLMTVTAIFT 486

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           + A  ++ LR +        ++D+  A   L   ++  KLS F +S+   G+ G   +++
Sbjct: 487 ILAIGVVALRNSGYGRRLAAMKDSPAAAAMLGQNLVKLKLSVFMLSAGIAGLGGILMSSA 546

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
              +S + F    ++ V+ + ++ G+  ++       +      + 
Sbjct: 547 IGAVSNENFSIMISLTVLMLTVVAGIGYVTGALFGGLMAGVGFAVI 592


>gi|113953040|ref|YP_732057.1| ABC transporter permease [Synechococcus sp. CC9311]
 gi|113880391|gb|ABI45349.1| ABC transporter permease protein [Synechococcus sp. CC9311]
          Length = 400

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 44/348 (12%), Positives = 97/348 (27%), Gaps = 32/348 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            +    + V   ++  +    +    +  ++  + L   + A G+ ++ G  GLLSL   
Sbjct: 31  QRPWLFVTVWVLIIAAIVAAPSVLPVFRLNLLGRFLSLAIVALGIDLIWGFTGLLSLGQG 90

Query: 72  IAYAIGAYSYVILGS------------------RYGLSIWLLIPVSAMISGACGMIMGLP 113
           I +A+G Y+  +                               P  + +     + +   
Sbjct: 91  IFFALGGYAAAMYLQLRSSIDMPNSIPEFFSLYGVDRLPLFWEPFRSPLFTLVAIWLIPA 150

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
            L      L     I    F  +      +                G      + F +  
Sbjct: 151 LLAGVLGNLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDVTVLFGQLE 210

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
                 +   +++   +  L    + W+ R    N    IRD++             K  
Sbjct: 211 LGSPEMQRGFFWLTAVIVILVWIFLRWVVRGRFGNVLIAIRDDEPRLRFTGYNPTLFKTI 270

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            FA++    G+ GA +      +SP       +I ++  V +GG  +L      +  ++ 
Sbjct: 271 VFAIAGGLAGIGGALYTVQSGIVSPQFMTVPFSIEMVIWVAVGGRGTLVGAILGSVSIMY 330

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              L                 +       +      LV+      ++ 
Sbjct: 331 AKSLVSE--------------ALPETWLFIQGGLFILVVTALPEGVIG 364


>gi|317968283|ref|ZP_07969673.1| putative membrane protein of ABC transport system [Synechococcus
           sp. CB0205]
          Length = 375

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 43/341 (12%), Positives = 93/341 (27%), Gaps = 31/341 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +   ++  +         +  ++  + L   + A G+ ++ G  GLLSL   I +A+G
Sbjct: 13  LLLWVVIIAAIVAAPAVLPVFRLNLLGRFLSLAIVALGIDLIWGFTGLLSLGQGIFFALG 72

Query: 78  AYSYVIL------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
            Y+  +                           A  +    P       +L  A L    
Sbjct: 73  GYAAAMYLQLNSSAGFPNGIPEFFGLYGVKQLPAFWVPFHSPLFTLVAIWLIPAVLAAVL 132

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTV-----------RSLIRFFRFPSSFVIYE 180
                  + K +             +                   + + F         +
Sbjct: 133 GNLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDVTQLFGQMVGSPEMQ 192

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
              ++    M   + +++ W+ R    +    IRD++             K   FA++  
Sbjct: 193 RGFFWFTALMVIAAWAVVRWVVRGRFGDVLIAIRDDEPRLRFAGFNPTLFKTIVFAIAGG 252

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             G+ GA +      +SP       +I ++  V +GG  +L         +     L   
Sbjct: 253 LAGIGGALYTVQSGIVSPQYMTVPFSIEMVIWVAVGGRGTLVGAILGAVAINYAKSLVSE 312

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                         +       +      LV+      ++ 
Sbjct: 313 --------------AMPQSWLFIQGGLFILVVTALPEGVIG 339


>gi|225628479|ref|ZP_03786513.1| high-affinity branched-chain amino acid transport system permease
           protein LIVM [Brucella ceti str. Cudo]
 gi|260166848|ref|ZP_05753659.1| high-affinity branched-chain amino acid transport system permease
           protein [Brucella sp. F5/99]
 gi|261756227|ref|ZP_05999936.1| bacterial inner-membrane translocator [Brucella sp. F5/99]
 gi|225616325|gb|EEH13373.1| high-affinity branched-chain amino acid transport system permease
           protein LIVM [Brucella ceti str. Cudo]
 gi|261736211|gb|EEY24207.1| bacterial inner-membrane translocator [Brucella sp. F5/99]
          Length = 310

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 106/324 (32%), Gaps = 38/324 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             +     +        +   +  +    LI    A   +I+ G  G  S    + Y +G
Sbjct: 6   ALLAIIAAVLALGAPLFASPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGLG 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   I   ++ L  +    +  + +    M++GLP L+ +G Y AIATL + ++   I 
Sbjct: 66  AYGAGIAMVQFNLPFFAGAAIGIVAAVVFAMLIGLPILRLKGHYFAIATLALPQVMAAIT 125

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                                    V             +  + F Y   L +  ++  +
Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L R+        IR+N++   ++       K+ A  +S AF  MAGA  A     + 
Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMGINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222

Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P+       N+ +I + + GG  ++         L  V                    ++
Sbjct: 223 PEAAYQVQLNVQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLST--------------AY 268

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
                    I + + +++    L 
Sbjct: 269 TDVAGMFFGIVIVVAVVLMPRGLA 292


>gi|221200394|ref|ZP_03573436.1| inner-membrane translocator [Burkholderia multivorans CGD2M]
 gi|221206074|ref|ZP_03579088.1| inner-membrane translocator [Burkholderia multivorans CGD2]
 gi|221174086|gb|EEE06519.1| inner-membrane translocator [Burkholderia multivorans CGD2]
 gi|221179735|gb|EEE12140.1| inner-membrane translocator [Burkholderia multivorans CGD2M]
          Length = 345

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/319 (11%), Positives = 96/319 (30%), Gaps = 18/319 (5%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +   +     V+  +              + ++     +  + A   + V+ + G + L
Sbjct: 32  TRQRLLAFASLVLLIVFFGAASPNFLEVDNLVAILQATAVNGVLAVACTYVIITSG-IDL 90

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +        A    ++ + +G+ + L I  +       G + G    K +          
Sbjct: 91  SVGTLMTFCAVMAGVVLTNWGMPLPLGIAAALGFGALSGCVSGFVIAKMKVPPFIAT--- 147

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                    +    +  G + +    R  +   T              ++  + +   +L
Sbjct: 148 ---------LGMMMLLKGLSLVISGTRPIYFNDTPGFTAIAQDSLIGHLVPALPIPNAVL 198

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  ++    + L RT        +  N++A       +   K++ +  S A  G+AG  
Sbjct: 199 ILFVVAVGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAVCGIAGLL 258

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            A+  +   P + +  E   + ++VI      GG  S++       I+  +      M+ 
Sbjct: 259 IASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIAGTIIGAFIMSVLTNGLRIMSV 318

Query: 304 YYFNSLLKFDCSFNMRHTT 322
                 +       +    
Sbjct: 319 AQEWQTVVTGVIIILAVYV 337


>gi|170755664|ref|YP_001780109.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium botulinum B1 str. Okra]
 gi|169120876|gb|ACA44712.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Clostridium botulinum B1 str. Okra]
          Length = 290

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 106/304 (34%), Gaps = 25/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G +++ G L +L+         G + +  + S + + + L I +
Sbjct: 6   LVNGITLGSIYCLAALGFNMIFGVLKMLNFAHGEILMFGTFIFFTMISIFKIPLILAIIL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I+G  G+++ L + K      A+A L+ S     +L     +  G            
Sbjct: 66  TIVITGLIGVLLYLIAYKPVLKGDAMAPLLSSLGVSIMLEALGQLIWGTE---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    +  + +       ++ L    L   +  ++ ++ I    R +  N+K
Sbjct: 116 -IIPFPINIPKGIYSIASIKLSNIQIFIFLFSITLMIILYKFIMKSNIGLQIRALSYNRK 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        +  F++++    ++G   +   D +   M      I   +  ILGG+
Sbjct: 175 YAELMGIETDKITMIVFSLATILAMVSGILSSMYYDALYVTM-GSGVMIKAFAAAILGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL     L        +   + F             I L LV++++ + 
Sbjct: 234 GSIPGALVGGYILGVSESLVGAYISTSYVDGIAF-------------IILVLVLIIKPNG 280

Query: 339 LLRL 342
           +   
Sbjct: 281 IFGE 284


>gi|163758221|ref|ZP_02165309.1| inner-membrane translocator [Hoeflea phototrophica DFL-43]
 gi|162284510|gb|EDQ34793.1| inner-membrane translocator [Hoeflea phototrophica DFL-43]
          Length = 300

 Score = 69.9 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 96/302 (31%), Gaps = 17/302 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I      + + GL++V G L +L++     YAIGAY+   +   Y        P 
Sbjct: 8   LVDGLIYAGWLFIVSVGLTLVFGVLNILNIAHGSLYAIGAYAAASMVGAYFALGGEAFPY 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            + ++     ++    L    +   +      +   N+L+ +      +  + +      
Sbjct: 68  GSYVAMILAAVLVALVLGPLLERGLLRFFYGRDEVLNVLVTYAVFLILEDVMKLIWG-VN 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             + Y  + + V+     +  ++ L L RT +      +  + +
Sbjct: 127 PYFVYEPYTLLGDVEIGPLFYVGYDFAVIAAAIIVGLAVWLTLNRTRVGKVVLAVIHDSE 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              ++   +    L AF   +    + GA  A             +  I+  ++VI+GG+
Sbjct: 187 MSQTMGVNVQRIYLGAFMAGTFLAALGGALTAPMISV--TPGLGVNVIIVAFAVVIIGGL 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A    ++         +                     ++   + +V+L R   
Sbjct: 245 GSVPGAAIGALMVGISRAASVHL--------------LPEAELFIIYFVMAIVLLFRPEG 290

Query: 339 LL 340
           L 
Sbjct: 291 LF 292


>gi|315645857|ref|ZP_07898978.1| urea ABC transporter, permease protein UrtB [Paenibacillus vortex
           V453]
 gi|315278618|gb|EFU41932.1| urea ABC transporter, permease protein UrtB [Paenibacillus vortex
           V453]
          Length = 301

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 87/290 (30%), Gaps = 16/290 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           +  G + ++++       IGAYS  +    +   +      +  I+      +    + +
Sbjct: 27  VTFGLMNVINMAHGELIMIGAYSTYVTQGLFTAYMPKSWFDTYFIAALLVSFVVAALIGW 86

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
             + + I  L       ++L  W      +           +  T  S +      +S +
Sbjct: 87  LLEMILIRHL-YGRPLDSLLATWGVGMMLQQIARFIFGAPNVAVTSPSWLNGGLAITSNI 145

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +      ++++ +  +  ++ L++ RT      R +  N+     L  +        FA+
Sbjct: 146 VLPYKRLFIIVLVALVVTAMYLYIYRTVQGRRMRAVMQNRNMAGCLGISTRRVDGLTFAI 205

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG                    +    +V+LGG+  L         +     L
Sbjct: 206 GSGIAGIAGCALTLLGPI--GPSIGTYYIVDAFMVVVLGGVGKLIGTVAGALGIGMFNTL 263

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                                    L+   +   +  +   L+ LRT S 
Sbjct: 264 FETYTSASIGK-------------VLVFALIVAFLQWKPRGLVALRTRSL 300


>gi|222106922|ref|YP_002547713.1| ABC transporter membrane spanning protein (sugar) [Agrobacterium
           vitis S4]
 gi|221738101|gb|ACM38997.1| ABC transporter membrane spanning protein (sugar) [Agrobacterium
           vitis S4]
          Length = 360

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 92/313 (29%), Gaps = 18/313 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +       +  G   S   +  +  Q+ I  +     ++++ + G + L+     
Sbjct: 52  LIVLILSLIAFGVILGGKFFSPFALTLILQQVAITGIIGAAQTLIILTAG-IDLSVGAIM 110

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +         YG+   L +     + G CG I G+   + +                
Sbjct: 111 VLSSVVMGQFAVHYGVPGPLAVLCGFAVGGICGFINGVLVARVKLPPF------------ 158

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    I      +Y  +          +      F  SF +    + Y ++ +  L 
Sbjct: 159 IVTLGMWQIVLAANFLYSGNETIRSQDLGTNAPILQYFGQSFKLGGAVLTYGVISLALLV 218

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A +   L  TA       + D+  A       +    +S + ++     + G        
Sbjct: 219 AVLWYVLNNTAWGRHLYAVGDDPDAAELSGVNVKRMLISVYTLAGLICALGGWAMIGRIG 278

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   +F+    + ++VI      GG  S+  +     I+                + 
Sbjct: 279 SVSPTAGQFANIESITAVVIGGMSLFGGRGSIMGMLFGALIVGVFQLGLRMAGTDPQWTY 338

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 339 MLIGVLIIAAVAI 351


>gi|187918893|ref|YP_001887924.1| monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
 gi|187717331|gb|ACD18554.1| Monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
          Length = 341

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/321 (12%), Positives = 100/321 (31%), Gaps = 22/321 (6%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
              L K      L+ ++          A      +  +     +  + A   + V+   G
Sbjct: 26  PTALQKLLAFGSLILLLVFF--SFASPAFMQMDNMLGILQATAVNGVLAIACTFVI-ITG 82

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+        A    +  + + L +W  +  +      CG + G  + K +      
Sbjct: 83  GIDLSVGTLMTFTAVICGVFLTYWHLPMWTGVLAAIGTGAICGTVSGTLTAKMKIPPFIA 142

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
                        +    +  G + +  AD+  +   T    +         ++  + + 
Sbjct: 143 T------------LGMMMLLKGLSLVVSADKPIYFTDTENFYMISQDSLIGDLLPSLPVP 190

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +L + FL+    + L RTA+      +  N++A       +   K++ + +S A  G+
Sbjct: 191 NAVLILFFLAVVSSITLNRTALGRYTFALGSNEEAVRLSGVNVDRWKIAIYGLSGAICGI 250

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELC 298
           AG   A+  +            +  I+ V++      GG  ++        I+  +    
Sbjct: 251 AGLLIASRLNSAQ-PALGQGYELEAIAAVVIGGTSLSGGAGTILGTIIGAFIMSVLTNGL 309

Query: 299 CGMNFYYFNSLLKFDCSFNMR 319
             M+      ++       + 
Sbjct: 310 RIMSVAQEWQIVVTGLIIILA 330


>gi|161520149|ref|YP_001583576.1| monosaccharide-transporting ATPase [Burkholderia multivorans ATCC
           17616]
 gi|189353672|ref|YP_001949299.1| simple sugar transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|160344199|gb|ABX17284.1| Monosaccharide-transporting ATPase [Burkholderia multivorans ATCC
           17616]
 gi|189337694|dbj|BAG46763.1| simple sugar transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 345

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/319 (11%), Positives = 95/319 (29%), Gaps = 18/319 (5%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +   +     V+  +              + ++     +  + A   + V+ + G + L
Sbjct: 32  TRQRLLAFASLVLLIVFFGAASPNFLEVDNLVAILQATAVNGVLAVACTYVIITSG-IDL 90

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +        A    ++ + +G+ + L I  +       G + G    K +          
Sbjct: 91  SVGTLMTFCAVMAGVVLTNWGMPLPLGIAAALGFGALSGCVSGFVIAKMKVPPFIAT--- 147

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                    +    +  G + +    R  +   T              ++  + +   +L
Sbjct: 148 ---------LGMMMLLKGLSLVISGTRPIYFNDTPGFTAIAQDSLIGHLVPALPIPNAVL 198

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  ++    + L RT        +  N++A       +   K++ +  S A  G+AG  
Sbjct: 199 ILFVVAVGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAVCGIAGLL 258

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            A+  +   P + +  E   + ++VI      GG  S+        I+  +      M+ 
Sbjct: 259 IASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTNGLRIMSV 318

Query: 304 YYFNSLLKFDCSFNMRHTT 322
                 +       +    
Sbjct: 319 AQEWQTVVTGVIIILAVYV 337


>gi|331017300|gb|EGH97356.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 305

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 92/303 (30%), Gaps = 17/303 (5%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +      + ++ A GL+I+ G +G++++       +GAY+  +L +     +  + P   
Sbjct: 17  NGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTVGAYTTYVLSTLVQTYMPSMQPYYF 76

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
             + A   ++             + + +       +L  W      +  +        + 
Sbjct: 77  FFAIALSFVVAGSIGWVVER--VMISRLYHRPLDTLLATWGLSLVMQQALRSIFGAREVS 134

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                 +      S  +       +V+     L+  I L L RT      R    N+   
Sbjct: 135 ANPPEWLMGAVSLSDTIEIPRNGLFVMALTVLLTGGIFLMLYRTRWGLHVRATVQNRVMS 194

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++           FA+     G+AG   A +    +         +    +V+ GG  S
Sbjct: 195 RAVGINTREVDRMTFALGCGVAGVAGV--AFTTIGSTGPTAGSLYIVDTFLVVVFGGAQS 252

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L     +   +     +           +L                A+ L++LMR   L 
Sbjct: 253 LLGTIASAFTIAQTQSIAEFFMSGSMAKVLTLS-------------AVILILLMRPQGLF 299

Query: 341 RLR 343
             +
Sbjct: 300 SSK 302


>gi|317402586|gb|EFV83148.1| ABC transporter [Achromobacter xylosoxidans C54]
          Length = 288

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 55/300 (18%), Positives = 117/300 (39%), Gaps = 41/300 (13%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++ + +    + A  + + +   G+L++       IGAY+  +L   Y +S  + +    
Sbjct: 13  NLVLTLGTNALLALSIWLTLA-CGMLAMANAAFMGIGAYAAALLTMNYDVSFPVALAGGM 71

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
                   ++GLP+L+  G YLA+ATL   E+ +  ++  + IT G  G+    +L    
Sbjct: 72  AAPALVAALIGLPTLRLSGVYLAMATLGFGEVVRVTVLNTESITGGALGLNGIPQLTQWW 131

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                                     ++    +   ++  +R + I  A+  IR ++ A 
Sbjct: 132 H-------------------------VILAVVIVLFVLWRVRASKIGRAFEAIRGDETAA 166

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             +   +   K+ AF   +   G+AGA  A     I P+ + F   + ++++ ILGG+  
Sbjct: 167 GLMGIDVRANKMLAFVAGAMIAGLAGALNAHLTFFIGPNEYGFDRGVEILTMAILGGIGG 226

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L+     + I+  + EL  G   +                  +  + L +++L     + 
Sbjct: 227 LAGPVLGSFIITVLPELLRGFADF---------------RLVINGVILVVIVLFLPQGIW 271


>gi|153004320|ref|YP_001378645.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5]
 gi|152027893|gb|ABS25661.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5]
          Length = 288

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 98/289 (33%), Gaps = 13/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +   +Y +   GL+I+ G + +++        +G Y+  I+ S  G+  +L I +
Sbjct: 8   VISGILVGGVYALIGIGLTIIFGVMRIINFAQGELLMLGMYATWIVFSWLGIDPFLSIVI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A +    G  +    +    + L    ++++     I+     +               
Sbjct: 68  TAPLLFLWGAFLQKTIINRVLNALPQNQILLTIGLGLIMSNSIML-----------AFTS 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +      F    +     + Y  L    ++ ++  +L +T    A R    ++ 
Sbjct: 117 DYRILTTSYSSSSFSVGGISISQPLLYAFLITAAITGALYWFLLKTDTGQAIRATAQDRD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    + AF + SA  G+AGA  + +           +  +    IV+LGGM
Sbjct: 177 AAQLMGINVKAMSVLAFGLGSALAGVAGALISPTYYI--FPQVGSAFTLKAFVIVVLGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            S+        I+     L           L+ F     +       + 
Sbjct: 235 GSVIGATLGGLIIGVTESLSAVYIASGLKELVTFVLFLGLLLFKPSGLL 283


>gi|259416810|ref|ZP_05740730.1| inner-membrane translocator [Silicibacter sp. TrichCH4B]
 gi|259348249|gb|EEW60026.1| inner-membrane translocator [Silicibacter sp. TrichCH4B]
          Length = 441

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 58/345 (16%), Positives = 114/345 (33%), Gaps = 22/345 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L+L     A     Y            M A  +   V    +L        +I   
Sbjct: 98  ILLALVLGAATIAAAIYTYRMLAAGLTRTVAMLAILIIGFVIYRAVLDPGVAAVESINPA 157

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                    GL + L  P+  +++     ++G  +L  R DYLAIATL ++EI   +L  
Sbjct: 158 LEG-NIGGLGLPVLLAWPLGGLLAAGVAWMIGKTALGLRSDYLAIATLGIAEIIIAVLKN 216

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF---------VIYEIFMYYVLLGM 190
              ++ G   +    R       ++    F    +S+         +  ++    +   +
Sbjct: 217 EDWLSRGVKNVVGLPRPLPYEVDLQGDPAFVEKAASWGLDATTASTLYVKLGYSLMFTAV 276

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +   +     ++      R IRDN+ A  ++   +    L  F + SA  G+AGA   
Sbjct: 277 LLVLLWMAQMALKSPWGRMMRAIRDNEVAANAMGKHVTRRHLQIFILGSAICGVAGAMMT 336

Query: 251 ASRDRISPDMFKFS-ENIIVISIVILGGMTSLSKIAKATAILIG-----------VVELC 298
               +++P  +       ++  +VI+GG  +         ++             ++EL 
Sbjct: 337 TLDSQLTPGTYNPLRFTFLIWVMVIVGGSGNNFGSVLGGLLVWFLWIKVEPMGVMLIELV 396

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                           S        M + L LV+      L+  +
Sbjct: 397 TSGMSEDSGLRAHLLESAAHMRLFTMGLVLLLVLRFSPRGLIPEK 441



 Score = 37.2 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 29/76 (38%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
            F   + S     ++    LI  + A G+++  G  GL ++  +   A+G  + V+    
Sbjct: 26  AFGIFSGSWNSSLTILNMGLISAIMALGVNLQWGFAGLFNVGIMGFTALGGLAVVLTSMS 85

Query: 88  YGLSIWLLIPVSAMIS 103
                W       +++
Sbjct: 86  PTPGAWEAGGQRILLA 101


>gi|110669469|ref|YP_659280.1| ABC-type urea transport system, permease protein I [Haloquadratum
           walsbyi DSM 16790]
 gi|109627216|emb|CAJ53706.1| ABC-type urea transport system, permease protein I [Haloquadratum
           walsbyi DSM 16790]
          Length = 308

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 100/310 (32%), Gaps = 18/310 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++ +    +L            +  M   I    + A GL+++ G +G+++L       +
Sbjct: 1   MIPLFIADVLKALDSIGVPVSQLLQMADSIAFIALAAIGLTVIFGMMGVINLAHGEFIMM 60

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY   +  +   L + + + + A+ + A G I+    +K     L  + ++   +   +
Sbjct: 61  GAYITTLSINVVSLPLPVAMILGALGTAAFGAIVERTIIKRLYGRLLDSMIVTFGLGLIL 120

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
               + I                G T                   +   +LL    +  S
Sbjct: 121 TQGTRIIFGNSLRSIGTPFGQVPGYTYSG----------------YRVLLLLAAIGVLGS 164

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           + L   RT      R    + +   ++           FA+ S   G+ GA +A S   +
Sbjct: 165 VYLAFTRTEFGVRARATIQDPETARAMGVDTDRMYTITFAIGSGLAGLTGALYAPSATIV 224

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
                 F   +     V+ GG + L   A A  IL  +  +   +   +F  +     + 
Sbjct: 225 PGMGQSFL--VESFVTVVTGGSSVLLGTALAGGILGTINAVFSNLYGNFFGQIALLMTAI 282

Query: 317 NMRHTTLMVI 326
            +       +
Sbjct: 283 IIIRLLPGGL 292


>gi|91777331|ref|YP_552539.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91689991|gb|ABE33189.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 343

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 55/299 (18%), Positives = 110/299 (36%), Gaps = 18/299 (6%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y   +     +  + A  L+++ GS GL SL      AIGA+S  IL +++GL +   + 
Sbjct: 43  YGLYIASSGGVMALGAMALTVLSGSAGLPSLGTAAFMAIGAFSAGILATQWGLGMLPALL 102

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           ++ ++  A G  + L +L+  G YLA+ TL +  + Q +           +G  +     
Sbjct: 103 LALVLGFAAGAGVALLTLRVSGLYLAVGTLALQHVVQIVATDLDLKFTYASGFMLESPHI 162

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                      +                + + +      +   L+R  +   W  +R   
Sbjct: 163 AGLAIDTPAKWWG---------------MTIVLLLGVYVLFRSLQRGHVGREWALLRTEP 207

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A  +L  + + A+L+ FA++SA I  +GA        +    +     I+ +++V LGG
Sbjct: 208 TAAATLGVSPVRARLTVFALTSAVIAASGAIDGYRLGNVQATGYSLHLAIMYLTVVALGG 267

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
              L     A+  ++ + +    +                     L+   L   +L   
Sbjct: 268 AGRLVGAVVASYAIVVLPDAIAAVLATLGIDA---TTRLAGIDNMLLGALLVCALLDLP 323


>gi|254461329|ref|ZP_05074745.1| inner-membrane translocator [Rhodobacterales bacterium HTCC2083]
 gi|206677918|gb|EDZ42405.1| inner-membrane translocator [Rhodobacteraceae bacterium HTCC2083]
          Length = 318

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 107/324 (33%), Gaps = 30/324 (9%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
            I    +  L+  M + GL+++   +G+L+      Y +GAY    +        W+ + 
Sbjct: 7   NIIDGLVTGLLLFMLSAGLTLIFSMMGVLNFAHASFYMLGAYFAYQISIAL--GFWMGLL 64

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           ++ +I G  G  +    L+    Y  +  LI +     ++ +      GK  +       
Sbjct: 65  IAPIIVGVLGAGVERYGLRRVHQYGHVPELIFTFGLALLIEELVQFIWGKNQMP------ 118

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                +  ++ +  F  +      +  +++     +   ++  L +T +    +      
Sbjct: 119 ---FNIPEVLNYTAFSVAGNSIPAYKIFMIFISVGIFMGLLYVLTKTRVGMIIQAALSYP 175

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +   SL   +    +  F V +A  G+AG          +     F    IV   +++GG
Sbjct: 176 RTVESLGHNVPLIFMGVFGVGTALAGVAGVIAGPVLG--TFPGMAFVLGSIVFVTIVIGG 233

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF-----------------NMRH 320
           + SL     A+ ++  +       N    +       S                      
Sbjct: 234 LGSLWGALVASLLIGWLTTFAKSYNLAMSDIFNAIGISTPENMDDNIFRDLWTVTSPQIA 293

Query: 321 TTLMVIALFLVILMRSHSLLRLRT 344
             L  I + ++++ R   LL  R 
Sbjct: 294 DILPYILMVMILIFRPAGLLGKRE 317


>gi|85704618|ref|ZP_01035720.1| ABC-type transport system permease protein II (probable substrates
           branched-chain/neutral amino acids) 5 [Roseovarius sp.
           217]
 gi|85671026|gb|EAQ25885.1| ABC-type transport system permease protein II (probable substrates
           branched-chain/neutral amino acids) 5 [Roseovarius sp.
           217]
          Length = 311

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 52/316 (16%), Positives = 117/316 (37%), Gaps = 28/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILG 85
            + +        +  +    L   +   G+++++   G +S    + + I AY+   ++ 
Sbjct: 2   AVIIAVPFLVPSMQLLVNFALAKGLAVLGVTVLL-RAGQVSFGHALYFGIAAYAGAFLMT 60

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           S      ++++ V  + +   G+ +GL  +++RG +  +  L  S IF +IL K+  +T 
Sbjct: 61  SMPATDFFVILIVGVLGAIVAGLFVGLFVVRYRGIFFGMLNLAFSMIFWSILEKFYHLTG 120

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G  G+                   F      V + + +YY +L +             + 
Sbjct: 121 GADGLRFTRP------------TVFGQALDHVQFNMVLYYSVLVLMVALGWFTHRWFASP 168

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +   ++TI+ N+     L  +   A LS + +S+A  G+ G     ++  ++P+   +  
Sbjct: 169 VGQLFQTIKTNETRLEYLGISPKRALLSGYLLSAALCGVGGVMMGMAQGVVTPEYVWWVR 228

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           +  ++ I +LGG  S+        I   V                            ++ 
Sbjct: 229 SAEMVFIAVLGGAGSVQGAFLGALIYEVVRTYASVYA--------------GDIWQMILG 274

Query: 326 IALFLVILMRSHSLLR 341
             L ++IL     L+ 
Sbjct: 275 GFLLIIILFAPGGLIG 290


>gi|330837584|ref|YP_004412225.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Spirochaeta coccoides DSM 17374]
 gi|329749487|gb|AEC02843.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Spirochaeta coccoides DSM 17374]
          Length = 410

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 43/320 (13%), Positives = 92/320 (28%), Gaps = 18/320 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +++   +  L  V+  +          +   + ++          A G++ V+   G + 
Sbjct: 15  IDRQKLLAPLALVIIYVFFAFVGRNFLTYTTLLNILDSSYYIGFIAIGVTYVI-ITGGID 73

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+C       A +       +G  +W  + +   +    G++ GL   +           
Sbjct: 74  LSCGTVLMCAAITGGTAFKTWGWPMWASLLLIIFVGLIFGILNGLLISRLNLPPFIAT-- 131

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                     +  + I+ G   I    R         +   F           +      
Sbjct: 132 ----------LGTQMISLGVGSIVSNVRSATFPPRGAADSWFKDLFKYMSPDNVSFPTGA 181

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L + F++    + L +T +      I  N++A       +   ++ A+ VS    G+ G 
Sbjct: 182 LVLFFVAFLAYVVLTKTKMGRYIFAIGSNKEAARLSGIDVKKWEMMAYVVSGLMAGIGGI 241

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
            FAA    + P      E   +   VI      GG  ++        I+  +      M+
Sbjct: 242 AFAAVYTTVMPAQGSGFELYAIAGTVIGGTSMSGGSGTILGTMIGVFIMSILRVGLPSMD 301

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
                  L            
Sbjct: 302 LQAHYQTLFTGIVVVGAVLL 321


>gi|303229642|ref|ZP_07316430.1| branched-chain amino acid ABC transporter, permease protein
           [Veillonella atypica ACS-134-V-Col7a]
 gi|302515767|gb|EFL57721.1| branched-chain amino acid ABC transporter, permease protein
           [Veillonella atypica ACS-134-V-Col7a]
          Length = 293

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 99/308 (32%), Gaps = 27/308 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GL++V G L ++++     + IGA+  + + + + ++I++ + V
Sbjct: 6   LVNGLTLGSLYAVLAIGLTLVFGVLNIINMAHGGIFMIGAFVGLFMVTVFNVNIFVALIV 65

Query: 99  SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           +  +    G ++   +     +     +A LI +      L     +  G          
Sbjct: 66  AMAVGAVLGYLLEFVALRPLRKKKVSHLAPLISTIGVSIFLESLALLLWGPQTRSFPPDY 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                +  + M  + + +           ++T I  A R +  +
Sbjct: 126 IGGLIDFGVFKISMVQIIGLGVSVLLMIILNVVI-----------KKTKIGKAIRAVSMS 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    L             ++SA    AG     S + I P M         ++++ILG
Sbjct: 175 TETAALLGINPTMIISVTVMIASALGAAAGVLVGLSFNAIEPTM-GVIIGFKGLAVLILG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +++       IL              F   + F               + +++  R 
Sbjct: 234 GLGNITGAMVGGFILGIAEIFSVAYGASTFRDAVAFG-------------LIIVLLFWRP 280

Query: 337 HSLLRLRT 344
             L   + 
Sbjct: 281 QGLFGSKD 288


>gi|302529455|ref|ZP_07281797.1| predicted protein [Streptomyces sp. AA4]
 gi|302438350|gb|EFL10166.1| predicted protein [Streptomyces sp. AA4]
          Length = 572

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 56/310 (18%), Positives = 118/310 (38%), Gaps = 21/310 (6%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS-YVILGSR 87
                    Y   +G+ +++  +   GL +V GS G++SL  +   AIGA+    +  + 
Sbjct: 27  IGLTVGLNGYFAYLGVSVVVAAIALLGLGVVTGSAGMISLCQLTFGAIGAWVVSALNVAH 86

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                   + +  + +G  G+++GLP+L+ RG  LA+ TL ++      L++ +      
Sbjct: 87  APGGFLFWLLLGGLAAGVVGVLIGLPALRLRGINLAVVTLGLAAAADVTLVEIQ------ 140

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                            +         S V  +   + + + +  + A ++ +LRR    
Sbjct: 141 --------------FPGTTEGVSVDRPSLVADDNAYFLLCVIVLIVCALLVHFLRRGPWG 186

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
           ++W  +  +++   +   ++  AKLSAFAVS+   G++G    A      P  F   +++
Sbjct: 187 SSWAAVAFSERGTAAAGASVRTAKLSAFAVSATLGGISGGLLTAQVGFAFPTSFAPLQSL 246

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            +  + I+ G   +        + + V EL            + F             + 
Sbjct: 247 ALYVLAIMSGAHLIDMAVFGAVLWVAVPELLKRWGVPQDWGYVIFGLLGIQALAGRGNLG 306

Query: 328 LFLVILMRSH 337
             +  L R  
Sbjct: 307 TAIRELWRRR 316


>gi|84502415|ref|ZP_01000551.1| putative branched-chain amino acid transport system permease
           protein [Oceanicola batsensis HTCC2597]
 gi|84389227|gb|EAQ02024.1| putative branched-chain amino acid transport system permease
           protein [Oceanicola batsensis HTCC2597]
          Length = 338

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 68/309 (22%), Positives = 123/309 (39%), Gaps = 26/309 (8%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
                ++ +        LIY +    L+++ GS G +SL     YAIGAY+  IL +  G
Sbjct: 41  FAPAFAKNFFVFQMTLWLIYAIAILALNLLTGSSGQVSLGHSAFYAIGAYTAAILLNETG 100

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L+  L +PV+A+     G + G P+L+  G  LA+AT  ++     I+            
Sbjct: 101 LNYVLTLPVAALFGFVAGFLFGFPALRLTGVALAMATFALAVATPAII------------ 148

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                  +  G     + +        +  + ++YY+ L +  L     L L  +    A
Sbjct: 149 KLHVFEEWTGGVQGLFVDKPRAPFGLPISDDAWLYYLTLAVGVLVFLFGLSLLNSRTGRA 208

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              +RDN  A  ++   +   K   F VS+A   +AGA  A +   ++ D F F   I++
Sbjct: 209 CLALRDNPIAASAMGVNVALYKTLIFGVSAAIASIAGALSAIAIQFVAVDSFTFHLAILL 268

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
              +++GG+  L       A ++ V  +  G++     +              +    L 
Sbjct: 269 FVGMVVGGIGWLPGSLVGAAFVVFVPNIADGISQGLSGA--------------VFGGLLL 314

Query: 330 LVILMRSHS 338
           LVI +  + 
Sbjct: 315 LVIFVLPNG 323


>gi|160899919|ref|YP_001565501.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160365503|gb|ABX37116.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 306

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 96/300 (32%), Gaps = 15/300 (5%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           L+  + A GL++V G + +++L     Y  GAY       R G     ++  +     A 
Sbjct: 18  LMLFLIAAGLTLVFGIMDIMNLAHGSLYMAGAYVAAETMQRTGSFTAAVLVAAVATGVAG 77

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
            ++  +   +          L + +    +L  +  I      + +      +   + + 
Sbjct: 78  VVLELVLIRR----------LAVRDHLAQVLGSYAVILIANDLVKMVWGPAPVMLNMPAA 127

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
           +         ++Y  +   +++     +  +  ++ RT      R    N++    +   
Sbjct: 128 LSGPVQLLPELMYPAYRLMIIVFGLAAALGLYWFVTRTRAGVLVRAGASNRQMATLMGVR 187

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +    L  F + +    +AGA                   I+V+  +++GG+ S+     
Sbjct: 188 VPLLFLGVFTLGAMLAAVAGALLGPITSV--QVGMGEDILILVLVCIVIGGIGSIRGALV 245

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMRSHSLLRLR 343
              ++  V              +     +           + + + +V++ R   L   R
Sbjct: 246 GALLVGMVDTAGRAFLPMLLRQVFSPAVASSVGPTLAAISIYVLMAVVLVYRPSGLFPAR 305


>gi|78061475|ref|YP_371383.1| ABC sugar transporter, inner membrane subunit [Burkholderia sp.
           383]
 gi|77969360|gb|ABB10739.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia sp. 383]
          Length = 345

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/326 (11%), Positives = 99/326 (30%), Gaps = 18/326 (5%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           + F     +   +     V+  +   +          + ++     +  + A   + V+ 
Sbjct: 25  ARFFNPAARQKLLAFASLVLLIVFFSIASPNFLEVDNLVAILQATAVNGVLAVACTYVII 84

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           + G + L+        A    ++ +++G+ + + I  +       G + G    K +   
Sbjct: 85  TSG-IDLSVGTLMTFCAVMAGVVLTKWGMPLPIGILAALFFGALSGSVSGFVIAKMKVPP 143

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                           +    +  G + +    R  +   T              +I  +
Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQDSLIGNLIPAL 191

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +   +L +  ++    + L RT        +  N++A       +   K++ +  S A 
Sbjct: 192 PIPNAVLILFLVAIGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAV 251

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+AG   A+  +   P + +  E   + ++VI      GG  S+        I+  +  
Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTN 311

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               M+       +       +    
Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYV 337


>gi|84502440|ref|ZP_01000576.1| ABC transporter ATP-binding protein [Oceanicola batsensis HTCC2597]
 gi|84389252|gb|EAQ02049.1| ABC transporter ATP-binding protein [Oceanicola batsensis HTCC2597]
          Length = 322

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 53/313 (16%), Positives = 113/313 (36%), Gaps = 32/313 (10%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-----GSRYG 89
           +  ++  +  + LI  + A  LS +   LG++S    +   I  Y+            + 
Sbjct: 18  NDFWLTQVATRALILGITALSLSFLATYLGVVSFAQAMMAGIAGYTIAYFGPNTVAIGWE 77

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L  WL IP++ +++   G + GL + + RG Y  + TL +   F  +  +   + NG  G
Sbjct: 78  LPFWLSIPLALVLATLAGALTGLVARRSRGIYAIMITLAIGVAFFYLTRQNYSLFNGWTG 137

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                     G  +R+               + +Y + L +   +  ++    R+ +   
Sbjct: 138 FSGVRAPQVFGLNLRA--------------PVPLYLMTLAVAVAALVLVAGFVRSPLGLT 183

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            + +RD      +L    +   ++AFA S    G  G       +RIS         I +
Sbjct: 184 IQALRDAPGRVRALGIPALGPIVAAFAFSGFIAGAGGILNVWYNERISSFSVGLGPIIDI 243

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           + I ++GG+   +         + +      +                 R  TL+ + L 
Sbjct: 244 LIICVIGGLRHPAGAFIGAIAFVLLETFAVDLID-------------RDRFNTLIGLVLL 290

Query: 330 LVILMRSHSLLRL 342
            ++++  + L  +
Sbjct: 291 AIVMLAPNGLQGM 303


>gi|115522621|ref|YP_779532.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115516568|gb|ABJ04552.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 286

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 97/304 (31%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL++V G LG+++L+    Y IGAY  + L   +G     L+  
Sbjct: 8   LLNGLQTGLVIFLAASGLTLVFGILGVINLSHGSFYMIGAYLALSLTGLFGDVFLALVAG 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +      +I  L                  +  Q +L+ +  I        V    Y 
Sbjct: 68  IPLAFALGLLIEWLFIRHLYDR----------DHLQQVLLTFALILVFNEFQQVIWGSYP 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S +      +  + Y ++   ++     L+ ++   +++T +    R    N++
Sbjct: 118 HAIPAPSYLSSSVQLTEGLSYPVYRLALMAICVVLAIAMAFVIQKTRVGRLIRAAESNRE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L           FA   A    AG   A                I    +V++GG+
Sbjct: 178 MVEALGFDSRLIFRMVFATGVALAATAGMLAAPIESA--YPGIGDRVLITSFVVVVIGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+      + ++                             + ++   + LV+++R   
Sbjct: 236 GSVRGAFIGSLLIGLADAFGKVF--------------LPQFSSIIIYALMALVLVVRPAG 281

Query: 339 LLRL 342
           L   
Sbjct: 282 LFGR 285


>gi|328545161|ref|YP_004305270.1| branched-chain amino acid ABC transporter permease [polymorphum
           gilvum SL003B-26A1]
 gi|326414903|gb|ADZ71966.1| Branched-chain amino acid ABC transporter, permease protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 342

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/317 (11%), Positives = 90/317 (28%), Gaps = 16/317 (5%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
                  +       +     L+  + A GL+IV G + +++       ++GA+    + 
Sbjct: 36  FLAVGNPSTWLTLTVAGLAMGLMIFIMASGLTIVFGLMDVINFGHGAFISVGAFVGFTVL 95

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI-MSEIFQNILIKWKPIT 144
                       +  + +    +I  + +    G       ++ +       ++      
Sbjct: 96  GWLAGWTADPRFMVNLGAVFIAIIASMAATGAMGYAFERVIVMPVYGQHLKQILVTMGGL 155

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                +             R               E +    +     L  ++   LR T
Sbjct: 156 IIAQQMIHVIWGPDAIHLARPESLRGSIVLGEAAIEKYRLLAVAIGLGLFLAMRHILRST 215

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            I    R   +N +   +L   I    L  F   SA  G+ G  +   ++ I+  M    
Sbjct: 216 KIGLLVRAGVENGEMVEALGYRIRRLFLLVFMAGSALAGLGGVMWGLYQETITAHM-GSE 274

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
             ++V  +VI+GG+ S+        ++  +      +                       
Sbjct: 275 IMVLVFIVVIIGGLGSVEGCFIGALLVGLLSNYTAFVA--------------PKVALVST 320

Query: 325 VIALFLVILMRSHSLLR 341
           +  +  +++ R   L  
Sbjct: 321 IALMVAILMWRPQGLYP 337


>gi|221209427|ref|ZP_03582408.1| ribose transport system permease protein RbsC [Burkholderia
           multivorans CGD1]
 gi|221170115|gb|EEE02581.1| ribose transport system permease protein RbsC [Burkholderia
           multivorans CGD1]
          Length = 345

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/319 (11%), Positives = 95/319 (29%), Gaps = 18/319 (5%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +   +     V+  +              + ++     +  + A   + V+ + G + L
Sbjct: 32  TRQRLLAFASLVLLIVFFGAASPNFLEVDNLVAILQATAVNGVLAVACTYVIITSG-IDL 90

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +        A    ++ + +G+ + L I  +       G + G    K +          
Sbjct: 91  SVGTLMTFCAVMAGVVLTNWGMPLPLGIAAALGFGALSGCVSGFVIAKMKVPPFIAT--- 147

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                    +    +  G + +    R  +   T              ++  + +   +L
Sbjct: 148 ---------LGMMMLLKGLSLVISGTRPIYFNDTPGFTAIAQDSLIGHLVPALPIPNAVL 198

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  ++    + L RT        +  N++A       +   K++ +  S A  G+AG  
Sbjct: 199 ILFVVAVGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAVCGIAGLL 258

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            A+  +   P + +  E   + ++VI      GG  S+        I+  +      M+ 
Sbjct: 259 IASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTNGLRIMSV 318

Query: 304 YYFNSLLKFDCSFNMRHTT 322
                 +       +    
Sbjct: 319 AQEWQTVVTGVIIILAVYV 337


>gi|284043596|ref|YP_003393936.1| ABC transporter [Conexibacter woesei DSM 14684]
 gi|283947817|gb|ADB50561.1| ABC transporter related protein [Conexibacter woesei DSM 14684]
          Length = 908

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 108/279 (38%), Gaps = 15/279 (5%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
            + L YV+    L ++V + G +SL  V   AIG  ++  L    G S    +  +A I+
Sbjct: 335 TRFLAYVVLFLALGLLVRTSGQVSLAHVSFMAIGVAAFSHLAVDQGWSWPAALLAAAAIA 394

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
              G ++ +P+++F G YLA+ATL      Q +      +    AG+ V        +  
Sbjct: 395 APIGALLAVPAIRFPGLYLALATLGFGIALQQMFYAQDFMFGAGAGLTVPRPELAGVSFE 454

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                               YY  L +  + A +++ + R+ +    R + D+     + 
Sbjct: 455 GDT---------------GFYYFTLAVTAIVALLVVGITRSRLGRLLRAMSDSPTGLAAS 499

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
             ++  +++  F +S++   +AG    A++  +  D ++   ++ + +++++        
Sbjct: 500 GASVNVSRVLVFCLSASIGAVAGVLDGAAQTLVGGDQYQPILSLQLFAVLMIAVGGVPWY 559

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
              A   ++             +  +L F CS       
Sbjct: 560 AVMAAFGMVVAPAYISTDPSVTYAFMLLFGCSAIAFAVM 598



 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 84/301 (27%), Gaps = 19/301 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +I +      ++ + A GL +   + G+ +       +  A+ +  L   +G+S  L  
Sbjct: 3   PFIVAGLTIGSVFALAAVGLVLTYKTSGIFNFAHGALASAAAFGFYWLRDLHGVSWPLAA 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +  ++      ++              A L+        ++    +     G       
Sbjct: 63  ALVVLVGAPLVGLLLARI----------ADLLAGASLAMKVVAMVGVLLAVQGGLQLLFP 112

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 V S +    F        +            +A + ++LRR+    A R + D+
Sbjct: 113 PGESRQVASFLPSDSFELFGTPVTVAQLITFAVGVLATAGLTVFLRRSRTGLAMRAVVDD 172

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +   S+       + +A+ + S   G +G     +              +       +G
Sbjct: 173 TELLDSMGVAPQRVRRTAWIIGSMMAGASGV--LLAPLLPLDATSITFLVVTAFGAAAIG 230

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G +SL         +     L                 S          + LF +++   
Sbjct: 231 GFSSLPLTYAGGLAIGVGQSLLQKYFVDATGIAGGLASSLP-------FLVLFGLLVFAP 283

Query: 337 H 337
            
Sbjct: 284 R 284


>gi|316935501|ref|YP_004110483.1| urea ABC transporter permease UrtB [Rhodopseudomonas palustris
           DX-1]
 gi|315603215|gb|ADU45750.1| urea ABC transporter, permease protein UrtB [Rhodopseudomonas
           palustris DX-1]
          Length = 308

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 92/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   +YV+ A GL+I+ G +G++++       +GAY   +  + +   +  L      I
Sbjct: 22  LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTWMTSNLFQSYLPSLFAGYFFI 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     I            L     +       +L  W      +           +G  
Sbjct: 82  AMILAFIASGALGMLVEWGL--IRHLYKRPLDTLLATWGLSLILQQAYRSIFGAREVGVE 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +   +  +  +   I   +V+     ++A +   L  +      R +  N+    +
Sbjct: 140 LPQWMLGSKQVTDTIEVPINGIFVMCLTVLITAVVFYLLFWSRWGRQVRAVMQNRVMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           F +     G+AG+ F       +         +    +V+ GG  SL 
Sbjct: 200 VGINTERVDRYTFGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLVVVFGGAASLF 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++A+ L+++MR   L  L
Sbjct: 258 GTIASAFSISQAQSTMEFFMSGSMAK-------------VLTLLAIVLILMMRPQGLFAL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|254428621|ref|ZP_05042328.1| amino acid or sugar ABC transport system, permease protein,
           putative [Alcanivorax sp. DG881]
 gi|196194790|gb|EDX89749.1| amino acid or sugar ABC transport system, permease protein,
           putative [Alcanivorax sp. DG881]
          Length = 308

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 94/301 (31%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                I+V+ A GL+I+ G +G++++       +GAY+  +    +   +  L      +
Sbjct: 22  LSLFSIFVLMALGLAIIFGQMGVINMAHGEFMILGAYTTYLTAQVFESLMPGLYGGYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++             +   +       +L  W      +           +G +
Sbjct: 82  AMFLAFVVTFALGALVEW--LMIRHLYHRPLDTLLATWGLSLILQQTYRSVFGAREVGVS 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +      +  V   I   +V++    ++ ++ L + R+      R +  N+    +
Sbjct: 140 LPDWMMGSIAVTDLVEIPINGIFVMVLALLIAFAVYLLMYRSGWGRKVRAVVQNRPMAEA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           FA+     G+AG+ F       +         +    +V+ GG  SL 
Sbjct: 200 VGIDSGRVDRVTFALGCGIAGVAGSAFTMIGS--TGPTSGQLYIVDTFLVVVFGGAQSLL 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++ +  ++++R   L  +
Sbjct: 258 GTIASAFTISQAQSTMEFFLSGSMAK-------------VLTLLVVVGILMLRPQGLFAM 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|146337632|ref|YP_001202680.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. ORS278]
 gi|146190438|emb|CAL74437.1| putative branched-chain amino acid ABC transporter, permease
           protein [Bradyrhizobium sp. ORS278]
          Length = 327

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 104/334 (31%), Gaps = 16/334 (4%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  +    L L  V+  L++ L    +       +     ++  + A GL++V G + +L
Sbjct: 3   KPKRDIAPLLLPVVLALLMIPLVGSTSSWVTLTVASLAMGMMIFIMASGLTLVFGLMDVL 62

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           +       A+GAY   ++            +  +  +     ++    +         + 
Sbjct: 63  NFGHGAFIAVGAYVATLVLLPLASWAQADSLLTNLAVLVPAALLSMGVTGALGLVVERVL 122

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            L +       ++              A     +            F    V    +   
Sbjct: 123 VLPVYGQHLKQILMTTGGLIVAEQTLYALFGPQIIPMPLPAALRGSFILGDVAISKYRLL 182

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            LL    +  +I L L RT I    R   +N++   +L   I    L  F   SA  G+ 
Sbjct: 183 ALLIGLVIFVAIELVLNRTKIGLLIRAGVENREMVEALGYRIRRLFLGVFMTGSALAGLG 242

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  +   R+++          ++V  +VI+GG+ S++       ++  V      +    
Sbjct: 243 GVMWGLYREQV-HASIGDELTVLVFIVVIIGGLGSITGCFIGAILVAMVANYGGFL---- 297

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
                              ++ +  V++ R   L
Sbjct: 298 ----------VPKLALVSNILLMVAVLMWRPRGL 321


>gi|254254454|ref|ZP_04947771.1| Ribose/xylose/arabinose/galactoside ABC-type transport systems
           permease component [Burkholderia dolosa AUO158]
 gi|124899099|gb|EAY70942.1| Ribose/xylose/arabinose/galactoside ABC-type transport systems
           permease component [Burkholderia dolosa AUO158]
          Length = 345

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/326 (11%), Positives = 97/326 (29%), Gaps = 18/326 (5%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           + F     +   +     V+      +          + ++     +  + A   + V+ 
Sbjct: 25  ARFFNPAARQKLLAFASLVLLIAFFSVASSNFLEVDNLVAILQATAVNGVLAVACTYVII 84

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           + G + L+        A    ++ + +G+ + L I  +       G + G    K +   
Sbjct: 85  TSG-IDLSVGTLMTFCAVMAGVVLTNWGMPLPLGIAAALGFGALSGCVSGFVIAKMKVPP 143

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                           +    +  G + +    R  +   T              +I  +
Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQDSLLGSLIPAL 191

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +   +L +  ++    + L RT        +  N++A       +   K++ +  S A 
Sbjct: 192 PIPNAVLILFVVAIGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDGWKIAVYTFSGAV 251

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+AG   A+  +   P + +  E   + ++VI      GG  S+        I+  +  
Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSILGTIIGAFIMSVLTN 311

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               M+       +       +    
Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYV 337


>gi|163855473|ref|YP_001629771.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella petrii DSM 12804]
 gi|163259201|emb|CAP41501.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella petrii]
          Length = 314

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 53/328 (16%), Positives = 117/328 (35%), Gaps = 37/328 (11%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L   A+    L+ +     +      S+ + + + V+       V   +G L+       
Sbjct: 5   LLTPAIASVGLVAIAASLLQGGGLAASLVLWLAVNVLITASFRFVT-LIGELNFAVAGFV 63

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GAY   +    +     L +  SA+ +G   ++ G  +L+ +G Y  + +   +E+ +
Sbjct: 64  GLGAYMAGVGSVTFNWPFLLTLVASAVFAGLISLVFGYITLRAKGPYFMLISFAFTEVIR 123

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I  K + I  G +G+                             + ++  +++ +    
Sbjct: 124 MIYTKTEAI-GGSSGMVGIFPP--------------------AYLDGYLPALVVAVVLAL 162

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              + ++ ++        IR+N     ++   +   K+    VSS   G+AGA  A S +
Sbjct: 163 LWALWFIEKSDFGKVLVAIRNNDAIVETVGINVHLTKVLCLGVSSFVAGIAGALLAYSNN 222

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ISP  F F   +  ++ + +GG + +        +L  +                +F  
Sbjct: 223 VISPGDFGFLLAVYALAYLKVGGESHILGAVVGAIVLTLL---------------GQFAL 267

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
           SF          A+ + +L+    L+ L
Sbjct: 268 SFGPYEHIFYGAAIVISVLLMPGGLIGL 295


>gi|149203025|ref|ZP_01879996.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. TM1035]
 gi|149143571|gb|EDM31607.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. TM1035]
          Length = 310

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 52/310 (16%), Positives = 105/310 (33%), Gaps = 28/310 (9%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y      ++++   +A G +++ G  GLLSL   + +A G Y   +     GL+    
Sbjct: 22  PAYHHGNLARVMVLASYAMGYNLMFGYTGLLSLGHALFFAAGMYGMGLGVQHLGLTPAPA 81

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + +  +   A   ++   +L+  G    I TL+ ++     ++ +  +T G  G      
Sbjct: 82  LILGVLAGAAVAGVLAALALRTAGVAFMIVTLMFAQAGYLTVLYFGALTRGDEG------ 135

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                +  E   Y   L +  L   + LWL R+        IR+
Sbjct: 136 -------FVIQQTQRMLWGIDLSDEGNRYLAALLLFGLCLMLCLWLVRSPFGRVLVAIRE 188

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N++    L   +   K +   +S      AGA +      +         +I  +  V+L
Sbjct: 189 NEERVRMLGYDVFAHKFAVMVISGTMAAAAGAAYGLLFGYVGATFASVQYSIFPLLWVLL 248

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  ++      T  +  +++L  G+                  +  +  +AL  + L  
Sbjct: 249 GGAGTVLGPFIGTLFMFYLIDLSSGV---------------TTAYMLIAGVALVALTLFA 293

Query: 336 SHSLLRLRTP 345
              L+     
Sbjct: 294 PQGLMGDVRR 303


>gi|302387308|ref|YP_003823130.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
 gi|302197936|gb|ADL05507.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
          Length = 293

 Score = 69.9 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 86/305 (28%), Gaps = 26/305 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +       Y + A G ++V G L L++      + +  Y  +   + +    ++ IP+ 
Sbjct: 11  LTGISLGGAYALIAIGYTLVYGILRLINFAHGDIFMMAGYFMIFAMASFP--WYISIPMV 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++   G+ +   + +       ++ +I +     +L                +  +  
Sbjct: 69  LLVTVVLGVSIERVAYRPLRSAPRMSVMISAIGVSYLLQNLATYLFTALPKGYPEIPFLK 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                            +      +   +    +   +I+ + +T I  A R +  +   
Sbjct: 129 KIYQ----------IGGLSASFVTFLTPVLTLVIVYGLIILINKTKIGMAMRAVAKDYDT 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   I       FA+ S    +    +   R  + P        +      + GG+ 
Sbjct: 179 ASLMGIKINRIITFTFAIGSLLAAIGSVLYFTDRMTVFPFS-GSLPGLKCFVAAVFGGIG 237

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        IL         M +  F+    F     +                +   L
Sbjct: 238 SIPGAVIGGFILGLGETALVAMGYSTFSDAFTFVLLIIILLI-------------KPTGL 284

Query: 340 LRLRT 344
              +T
Sbjct: 285 FGEKT 289


>gi|290962355|ref|YP_003493537.1| branched-chain amino acid transporter, permease protein
           [Streptomyces scabiei 87.22]
 gi|260651881|emb|CBG75011.1| putative branched-chain amino acid transport system, permease
           protein [Streptomyces scabiei 87.22]
          Length = 675

 Score = 69.5 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 102/321 (31%), Gaps = 13/321 (4%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
                                     LI ++      ++ G +G +S+  +       + 
Sbjct: 321 ALISATVAAAALIVLPFDFRQALTNSLIGMVIVLSYVVITGYVGQISVMQLALSGTAGFV 380

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
              L   +G+        + +++   G+  G+ +L+ RG  LA+ TL  +   +  L   
Sbjct: 381 LSHLSVGWGIPFPFSALGAMVLATLLGVAAGVSALRVRGVSLAVVTLAAALAMEQALFNN 440

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
                         RL+     +    +                +++L +       +  
Sbjct: 441 TSFGGTAGVSVPPPRLFG----IDLGPKADFRGLDGNEPSPMFGFLVLAVTVALGLYVAH 496

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           LRRT +      +R N++A  +    +   K++AF +SS     AG  +  +   +S   
Sbjct: 497 LRRTGLGRRMLAVRSNERAAAAAGVDVRAVKIAAFTISSFIASAAGTLYGYNFGSVSAAR 556

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F     + +I    +GG+T +S    A  +                ++L K+        
Sbjct: 557 FTALAALGLIGFAYIGGITMVSGAVIAGLM---------STEALLPHALDKWFGIKGTWA 607

Query: 321 TTLMVIALFLVILMRSHSLLR 341
                ++L + ++     +  
Sbjct: 608 LLFGGVSLIVTLIANPDGIAG 628


>gi|242280017|ref|YP_002992146.1| ribose ABC transporter permease protein [Desulfovibrio salexigens
           DSM 2638]
 gi|242122911|gb|ACS80607.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638]
          Length = 322

 Score = 69.5 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 98/312 (31%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  VV  +++        +   I ++  Q  I  + A G+++V+ + G + L+     A
Sbjct: 24  LIALVVMIVIVSFLNPNFFTTGNILNILRQTAINAVMAVGMTLVILTAG-IDLSVGSVLA 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +                 ++   +A+ +GA    +    +        IATL+   + + 
Sbjct: 83  LCGAVGA--SLIAAQMPVIVAVGAALGAGAILGGISGVIIAKGKVQAFIATLVSMTLVRG 140

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + +        G                      F      Y + + + +  M F   
Sbjct: 141 LTLVYTDGRPISTGFTEVA---------------DSFAFIGTGYLLGIPFPIWIMAFTFG 185

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T +      +  N++A       +   K++ +A++     ++G    +    
Sbjct: 186 AAWYLLNHTRLGRYIYALGGNEEATRLSGINVDRIKIAVYAIAGFLSALSGLIVTSRLSS 245

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG  ++        I+  +      ++   +  ++
Sbjct: 246 AQPTAGYGYELDAIAAVVLGGTSLMGGKGTIMGTLLGALIIGFLNNALNLLDVSSYYQMI 305

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 306 AKALVILLAVLV 317


>gi|206558422|ref|YP_002229182.1| putative branched-chain amino acid ABC transporter permease
           [Burkholderia cenocepacia J2315]
 gi|198034459|emb|CAR50324.1| putative branched-chain amino acid ABC transporter permease
           [Burkholderia cenocepacia J2315]
          Length = 294

 Score = 69.5 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 104/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +GL  W ++ ++ ++ GA G+ +    L++      +  L+++     ++        G
Sbjct: 63  YFGLPYWAMLALAPLMVGAFGIAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 123 SSGQPYDVPSQLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +                     +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSIVTGLLLGVIEGFTRVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L R   L  
Sbjct: 277 IMAIVLLFRPAGLFG 291


>gi|238761182|ref|ZP_04622159.1| Permease protein of sugar ABC transporter [Yersinia kristensenii
           ATCC 33638]
 gi|238761435|ref|ZP_04622411.1| Permease protein of sugar ABC transporter [Yersinia kristensenii
           ATCC 33638]
 gi|238700409|gb|EEP93150.1| Permease protein of sugar ABC transporter [Yersinia kristensenii
           ATCC 33638]
 gi|238700662|gb|EEP93402.1| Permease protein of sugar ABC transporter [Yersinia kristensenii
           ATCC 33638]
          Length = 707

 Score = 69.5 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 93/299 (31%), Gaps = 21/299 (7%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
           FL    +   +     Q   + +   G+SIV+   G + L+    +A+ A++ V   S  
Sbjct: 48  FLPGFFALSSLTDTSRQWGEFALVVMGMSIVM-LGGGIDLSVGAIFALSAFTAVSANSLL 106

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           GL +W  + ++  +    G   G+     R        +    +                
Sbjct: 107 GLPLWQSLLLTLAVGALAGAFNGVLIGYLRLRAFLTTLVSFILLRTLF------------ 154

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                  + +     +S +   ++          +    +    ++  + L L R  +  
Sbjct: 155 ---DILVVKYATQIQQSSVDNSQWNFIGEEGIGPLPVSFVLAVLVAIGLHLLLSRMRLGW 211

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
             + +  ++++ ++    +       + +S    G+AG   A     + P      E + 
Sbjct: 212 HIQAVGGSRRSAWNTGIAVRRTVFITYVLSGLCCGLAGFLLATRMGGVGPGTGLGLEIMA 271

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + V+      GG  S+ K      I++ +      +     ++ +            
Sbjct: 272 LTAGVVGGNSLGGGRGSIMKGILGAIIVLLLTNGLIRLGLPSGSTQMVLGVVLIAAVFL 330


>gi|126736710|ref|ZP_01752449.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. CCS2]
 gi|126713825|gb|EBA10697.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. CCS2]
          Length = 388

 Score = 69.5 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 48/367 (13%), Positives = 102/367 (27%), Gaps = 36/367 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +  ++  +  V   +L    G             + L   + A  + +V G  G+LSL  
Sbjct: 14  WFILILSIFTVIVTVLSEVTGVDLISTSFVKTLGKTLCLCLVAIAMDVVWGYCGILSLGH 73

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVS-----------------AMISGACGMIMGLP 113
              + IG Y+  +          +L  ++                  +          L 
Sbjct: 74  FAFFGIGGYAIGMWLMYARTEGIVLTSLAGQPIPPTPAEISDAIGNQIFGVVGSSEFPLI 133

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
                   L +  +++      ++  W    +   G+Y++     +   +   +      
Sbjct: 134 WAFADSLTLQLLMVVLVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALALYLFQNDSG 193

Query: 174 SSF------------------VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                    I  +           +   W+    + +  + IRD
Sbjct: 194 LRGNNGLSGLQNIPGYEDVPQATVSIIFFIASAVALGAGYAFFAWIVSGKMGSVVKGIRD 253

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N+     L   +   KL  F  ++   G+AGA +      I+P       +I +   V +
Sbjct: 254 NEARVRFLGYHVESYKLFIFTTTAVVAGIAGALYYPQAGIINPGEIAPIASIYLAVWVAI 313

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG   L       A +  +     G        L  +   +      L+ ++   V L  
Sbjct: 314 GGRGRLYGAVIGAAFVSLLSSWFTG-GGAPNIDLGLYVIQWTDWWLVLLGLSFVAVTLFF 372

Query: 336 SHSLLRL 342
              +  L
Sbjct: 373 PKGIGGL 379


>gi|39934326|ref|NP_946602.1| putative branched-chain amino acid transport system permease
           [Rhodopseudomonas palustris CGA009]
 gi|192289854|ref|YP_001990459.1| urea ABC transporter permease [Rhodopseudomonas palustris TIE-1]
 gi|39648174|emb|CAE26694.1| putative branched-chain amino acid transport system permease
           protein [Rhodopseudomonas palustris CGA009]
 gi|192283603|gb|ACE99983.1| urea ABC transporter, permease protein UrtB [Rhodopseudomonas
           palustris TIE-1]
          Length = 308

 Score = 69.5 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 92/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   +YV+ A GL+I+ G +G++++       +GAY   +  + +   +  L      I
Sbjct: 22  LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTWMTSNFFQSYLPSLFAGYFFI 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     I            L     +       +L  W      +           +G  
Sbjct: 82  AMILAFIASGALGMLVEWGL--IRHLYKRPLDTLLATWGLSLILQQAYRSIFGAREVGVE 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +   +  +  +   I   +V+     ++A++   L  +      R +  N+    +
Sbjct: 140 LPQWMLGSKQVTDTIEIPINGMFVMALTVLITAAVSYVLFWSRWGRQVRAVVQNRVMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           F +     G+AG+ F       +         +    +V+ GG  SL 
Sbjct: 200 VGINTEKVDRYTFGLGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFLVVVFGGAASLF 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++A+  ++++R   L  L
Sbjct: 258 GTIASAFSISQAQSTMEFFMSGSMAK-------------VLTLLAIVAILMVRPQGLFAL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|253700660|ref|YP_003021849.1| inner-membrane translocator [Geobacter sp. M21]
 gi|251775510|gb|ACT18091.1| inner-membrane translocator [Geobacter sp. M21]
          Length = 294

 Score = 69.5 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 88/290 (30%), Gaps = 13/290 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ S      IY +     +I+  S G+++        +G    +   +   L +   I
Sbjct: 9   QFVISGLATGAIYALIGLSFAIIFNSTGIINFAQGEFVMLGGVLTIFCINALQLPLPAAI 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +   +   G++    +++   +   ++ +I++     ++     +  GK         
Sbjct: 69  CAAVAGTTVIGLVFERLAIRPLKNATPLSLIIITIGASILIRGLVMLLWGKD-------- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + +         +         ++      +     L+   T    A R    N
Sbjct: 121 ---TQALPAFSGNDPISVAGATLLPQHLWIFGVTILVIVGCRLFFHHTISGKAMRACSFN 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   +  ++    L +F +S+A   +AG   A                +      I+G
Sbjct: 178 PRAANLVGVSVGRMVLFSFVISAAVGSLAGVIIAPLTMTA--YDVGVMLGLKGFCAAIMG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           GM S         IL  +  L  G+    +   + F     +       +
Sbjct: 236 GMGSGLGTVLGGLILGTLESLGAGLISSGYKDAIAFFILLLILFIRPQGL 285


>gi|313902321|ref|ZP_07835725.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Thermaerobacter subterraneus DSM 13965]
 gi|313467369|gb|EFR62879.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Thermaerobacter subterraneus DSM 13965]
          Length = 299

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 99/305 (32%), Gaps = 16/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L +++      +A+GAY  +       L        
Sbjct: 6   VVNGLTVGSIYALVALGYTMVFGVLKMINFAHGDLFALGAYLGLTFLIWGALGQGTGGLA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +++G    +    +                 +    ++    ++       +     F
Sbjct: 66  GVLLAGLLAALSVGLAGVLVERVAYRPLRGAGRL--PAVVSALGMSVFIQNGIMLIWGAF 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  ++    +    V   +    +L G   L  ++ L+++ T +  A R I  + +
Sbjct: 124 PVAFPHDMLPEASWSVGGVTVSLMRLVILGGSLVLMLALYLFVQYTRLGAAMRAIAVDHE 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + +A  G+AG        +++  M  +   +   +  ILGG+
Sbjct: 184 TARLMGIDVNRLIQLVFLLGAALGGLAGVMVGLYYGQLNFTM-GWLYGLKAFTAAILGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L     L  G     +   + F               L L++L+R   
Sbjct: 243 GNIPGAMVGGLVLGLAETLAAGYVAGEWKDAVAF-------------FILILILLVRPTG 289

Query: 339 LLRLR 343
           LL  R
Sbjct: 290 LLGER 294


>gi|269792300|ref|YP_003317204.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269099935|gb|ACZ18922.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 294

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 88/303 (29%), Gaps = 24/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A G S+V   L   +        IG Y+     +  G++IW+   +
Sbjct: 9   IINGLSLGSVYALIAVGYSLVYSILLFSNFAHGGFLVIGGYTCYYALNSMGVNIWVAGAL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +  G   ++    + K   +  ++   ++       ++          G + A     
Sbjct: 69  SLLAGGLSAVLTEKIAYKPIRERTSVTLYLLIASMGMSIVIENLFVVTVGGRFRALPPVI 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V                  F    L+        + L+L +T    A R    N +
Sbjct: 129 PTNPVN--------FFGIATTSAFDIISLVTAVVCLTGLQLFLSKTKWGLAIRAASYNLR 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F V+     + G F +      +         I      ++GG+
Sbjct: 181 TAGLMGVNVSLLISIVFFVAGLLASIGGIFLSVRY---TLYPQLGIITIKAFVAAVIGGL 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL      + IL     L  G+    F                ++   L   +L+R   
Sbjct: 238 GSLPGAVVGSLILGLAEMLTAGLISSQF-------------RDLVVFALLIFTLLIRPTG 284

Query: 339 LLR 341
           L  
Sbjct: 285 LFG 287


>gi|296121046|ref|YP_003628824.1| inner-membrane translocator [Planctomyces limnophilus DSM 3776]
 gi|296013386|gb|ADG66625.1| inner-membrane translocator [Planctomyces limnophilus DSM 3776]
          Length = 328

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 94/291 (32%), Gaps = 20/291 (6%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K    +  + +   ++  +   A  S   + ++      + + + G+  V+   G + L+
Sbjct: 2   KRILGILGILIAVMVVTGILQPAFLSGYNLSNVTQLSAYFAILSIGVMFVI-ITGGIDLS 60

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +      +L  +YG    L I     ++   G   GL   K +     + TL  
Sbjct: 61  IGPVVGLVGCLLPLLIVKYGFHPALAIAFVMGVAALIGTTHGLLITKAKLQPF-VVTLCG 119

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
             I++ +        N   G      L      +             +  +  +   ++ 
Sbjct: 120 WLIYRGLARWITGDANQGFGNSFNGLLEISRKKIP------------LPGDYQVPIPVVY 167

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           M  ++    ++L +T        I  N++A           KL A+ + S   G  G   
Sbjct: 168 MLIIAVLAAIFLNKTVWGRYLYAIGRNEQAAHFSGINTDRIKLMAYVLCSTIAGFGGVLL 227

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGV 294
           A   + + P     +  +  I+  +LGG        S++ +     +L  +
Sbjct: 228 AFDLNSMQPSSHGNTYELYAIAAAVLGGCSLRGGEGSVAGVVIGAVLLRVL 278


>gi|237752243|ref|ZP_04582723.1| ABC transport system permease [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376485|gb|EEO26576.1| ABC transport system permease [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 299

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 93/290 (32%), Gaps = 11/290 (3%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +Y + A G ++V G L L++        +GA+      + +G+  ++   ++
Sbjct: 11  INGLSLGSMYALIAIGYTMVYGCLRLINFAHADIMMVGAFLVFFAVNAFGIPFYVSAILA 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            ++ G  G+++   +         I+ LI +      L     +  G    + +   +F+
Sbjct: 71  VILCGILGVLIDKIAYTPLRSAPRISMLITAIGVSFFLENVFNVFFGSTPRFFSAPEFFM 130

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                            V        V +    L   ++ +L  T    A R    +   
Sbjct: 131 QP----------IAIFGVSLTAITIIVPVVTLVLLVLLLRFLHYTKQGMAIRASAFDINT 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +       FA+ S   G+ G F+A S   I P M      +   +  +LGG+ 
Sbjct: 181 VRLMGINVNNIIALVFAIGSMLAGIGGIFYAISYPTIDPLM-GVLIGLKAFAAAVLGGIG 239

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           S+        IL     +   +          F   F +       I + 
Sbjct: 240 SVGGAVLGGFILGFTEVMAVALFPELGGYKDAFAFLFLILVLLFRPIGIM 289


>gi|91780885|ref|YP_556092.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693545|gb|ABE36742.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 334

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 55/304 (18%), Positives = 108/304 (35%), Gaps = 17/304 (5%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            + + +         +  +  I +L     A   ++  G  G  SL   I    GAY+  
Sbjct: 12  VIGIAVLGLPWIGNSFAVTTAIAVLYLAYQALAWNLTGGLAGQFSLGNTIFIGAGAYTST 71

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSL--KFRGDYLAIATLIMSEIFQNILIKW 140
            L   +GLS W  +   A+++     ++GL +     RG Y A+ TL ++++ Q ++   
Sbjct: 72  YLFLTFGLSPWFGLIAGALLAVVLAYLIGLLTFRLNLRGLYFAMVTLALAQMVQVLVENM 131

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +      +       F      S                  YY++LGM   +A ++  
Sbjct: 132 PSLGGAYGLLIPVRGTSFAAFQFESR--------------AAYYYIVLGMVTGAACLMTA 177

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +RR         +R+N+ A  ++   I+     AF +S+    + G F A     I P  
Sbjct: 178 IRRGRAGLMLDGLRENENAARAVGVPIVRNMQIAFGLSACLAAVGGTFIAQYTLFIDPKS 237

Query: 261 -FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F ++E +  +   ++GG            +L  V +    +       L +      + 
Sbjct: 238 TFAWTEAVYFLLPAVVGGSRHWWGPVIGAILLGVVSDGTQLLFGDSIKGLPQIIYGIVVI 297

Query: 320 HTTL 323
              +
Sbjct: 298 IVVM 301


>gi|90580507|ref|ZP_01236313.1| ribose high-affinity ABC transporter permease component [Vibrio
           angustum S14]
 gi|90438416|gb|EAS63601.1| ribose high-affinity ABC transporter permease component [Vibrio
           angustum S14]
          Length = 327

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 87/312 (27%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + +     +  +       +   G+   + +                + F  
Sbjct: 88  LCGALAASMIALEIPVLIAVPTALLAGALLGGISGVIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T    +  +F    +  I       V +      A
Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADVFAWFGTGYALGIPVPVWLMVFVF-----A 190

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L  T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 191 GVWYLLNHTRFGRYIYALGGNESAARLSGINVDRVKIGVYAICGMLAALAGIIVTSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLV 322


>gi|89093398|ref|ZP_01166347.1| probable transmembrane ABC transporter protein [Oceanospirillum sp.
           MED92]
 gi|89082377|gb|EAR61600.1| probable transmembrane ABC transporter protein [Oceanospirillum sp.
           MED92]
          Length = 292

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 104/303 (34%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+I+ G L +++      Y +GA+   +     G++ W  + +
Sbjct: 13  LLVGLINGSFYALLSLGLAIIFGLLKIINFAQGALYMLGAFIAFLALKYMGINYWAALII 72

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +  G  G++M    ++   +   + +L+++     I+        G +G+  A     
Sbjct: 73  VPVCVGLVGILMERFLIRPIANEDHLYSLLLTFGLALIIQGAFTHMFGSSGLSYAIP--- 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                            F+    +  ++++    +       + +T +    R   +N +
Sbjct: 130 -------EELKGGNRLPFMYLPNYRAWIIIASVAVCFGTWYMIEKTKLGAYLRAGTENPQ 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       F    A  G AG   A             +  I+V +IV++GGM
Sbjct: 183 LMQAFGINVPLIVTLTFGFGVALAGFAGVMAAPVYSV--SPDMGSNILIVVFAIVVIGGM 240

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +  V  L                  +    TT++ + + +V+L++   
Sbjct: 241 GSIGGAILTGLGMGVVEGLTKYF--------------YPEASTTVIFLVMVIVLLLKPAG 286

Query: 339 LLR 341
           L  
Sbjct: 287 LFG 289


>gi|260433662|ref|ZP_05787633.1| branched-chain amino acid ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417490|gb|EEX10749.1| branched-chain amino acid ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
          Length = 291

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 102/305 (33%), Gaps = 29/305 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96
           + S      +Y + A G  ++  +   ++        +GA+  +        GL  WL +
Sbjct: 7   LISGLANGCVYGLIALGFVLIYKATEAVNFAQGDFMMLGAFVTIGLTNTEYMGLPFWLAL 66

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P+S  I GA G ++    ++        A +I++     ++     +  G          
Sbjct: 67  PISLGIMGALGYLLDRLIIRRLFGESQTAVVILTIALGFVIRFVAGLIWG---------- 116

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                T+ + +         ++  +    V++    L+  + ++  +T +  A +    N
Sbjct: 117 -HEPQTLENPLAGKEVRFGGLVLGMEDVAVIVVTVLLTWGLYVFFSKTKLGLAMQGASQN 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           Q A + +   +   +   + ++    G+AG  FAA     S D       I   +  ++G
Sbjct: 176 QLAAYYMGVPVKRVQGFIWGLAGVVAGIAGILFAAK---GSVDPTTGLLGIKAFAAAVIG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  SL        I+  +           ++ +                  L  V++ R 
Sbjct: 233 GFGSLPGALAGGLIVGVIEPFASRYIAAGYSQIAP-------------YALLLAVLIFRP 279

Query: 337 HSLLR 341
           H L  
Sbjct: 280 HGLFS 284


>gi|217969800|ref|YP_002355034.1| branched-chain amino acid ABC transporter permease [Thauera sp.
           MZ1T]
 gi|217507127|gb|ACK54138.1| inner-membrane translocator [Thauera sp. MZ1T]
          Length = 317

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 60/335 (17%), Positives = 125/335 (37%), Gaps = 36/335 (10%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             +   IL     +  L+    +  T          +++L + +FA   ++++G  GLLS
Sbjct: 8   FARAMPILFGALFLIGLVAPFAVYPTF--------LMKVLCFGLFACAFNLLLGFAGLLS 59

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                      Y   +L    G++  L I    + +GA G + G+ +++  G Y A+ TL
Sbjct: 60  FGHAAFLGSAGYVCGMLVRDLGVTPELGILGGTLAAGALGWVFGVLAIRRTGIYFAMITL 119

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +S++   ++++WK                     ++ + R   F    +   + MYY++
Sbjct: 120 ALSQMVYFVVLQWKATGG--------------EDGLQGVPRGHLFGVIDLSNNLAMYYLV 165

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  +   II     +      + IR+N+    SL   +   KL AF +S+A  GMAGA
Sbjct: 166 FAVFCIGFFIIYRAIHSPFGQILKAIRENEPRAMSLGYDVAKFKLLAFVLSAALAGMAGA 225

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
                    S     +  +  V+ + +LGG+ ++       A ++ +          +  
Sbjct: 226 TKTLVFQLASLTDVHWHMSGEVVLMTLLGGLGTVLGPLVGAATIVSLQTELADSVGSWVT 285

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                          +M     + +L+    ++  
Sbjct: 286 --------------VIMGTIFVVCVLLFRRGIVGE 306


>gi|319760995|ref|YP_004124932.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|330822857|ref|YP_004386160.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317115556|gb|ADU98044.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|329308229|gb|AEB82644.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 632

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 115/304 (37%), Gaps = 33/304 (10%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y   +   + I  +FA  L  ++G  G+ S      + +GAY   +L     L +   + 
Sbjct: 345 YATVLLTDVAIAALFAASLHFILGPGGMHSFGHAAYFGLGAYGAALLVRWLDLPMGAALL 404

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           +  + + A  ++ G   ++  G YLA+ TL  ++I   +  +W  +T G  G+       
Sbjct: 405 LGPLAAAAGALVYGWFCVRLSGVYLAMLTLAFAQITWAVAFQWDGLTGGSNGLTGIWPPE 464

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
           +                         Y++ L +      ++  +    +  A R  RD+ 
Sbjct: 465 W------------------AAQGAAFYWLALALAAAGVYLLRRMLFAPLGWALRAARDSA 506

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               ++   +   + +AF V+    G+AGA FA S+  ++PD     +++  + +V+LGG
Sbjct: 507 PRAEAIGIHVRRVQWAAFVVAGLLAGLAGALFAFSKGGVAPDALWVGKSVDGLVMVLLGG 566

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           +  L+      A    + +       Y+                 L+   + +++L+   
Sbjct: 567 VQQLAGPLVGAAAFTWLHDSVARATDYWRA---------------LLGGTMLVLVLLFPQ 611

Query: 338 SLLR 341
            +  
Sbjct: 612 GISG 615



 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 96/306 (31%), Gaps = 17/306 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR--YGLSIWLLI 96
           + +         + A GLS++ G   +++      Y +G ++      +    +  W  +
Sbjct: 10  LLNGLAGASTLFLVAAGLSLIFGVTRIVNFAHGSFYMLGLFAAYSCVEQLAGAIGFWPAL 69

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ +  G  G ++ L  L+       +  L+ +     ++        G   ++     
Sbjct: 70  LLAPLAVGLLGALVELLLLRRIYHASELLQLLATFALVLVIKDAALWLWGPEELFGPRAP 129

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G                  +  +  +++     +   + L L RT      R    +
Sbjct: 130 GLAGA----------VDLLGRRFPAYDLFLIAVGPLVLVLLTLLLTRTRWGTLVRAATQD 179

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +L     +     FA+ +   G+ GA                        +V++G
Sbjct: 180 REMVGALGVNQAWLFTGVFALGALLAGLGGALQLPREPA--SLELDMLTIGAAFVVVVVG 237

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM S+     A  ++    EL     +     +     +F      +  + + LV++ R 
Sbjct: 238 GMGSIPGAFVAALLIA---ELKAVCIWLGVVQVGGVAVAFPKLTLVVEFLVMALVLVWRP 294

Query: 337 HSLLRL 342
             L+  
Sbjct: 295 WGLMGR 300


>gi|332286059|ref|YP_004417970.1| putative ABC transport protein, inner membrane component
           [Pusillimonas sp. T7-7]
 gi|330430012|gb|AEC21346.1| putative ABC transport protein, inner membrane component
           [Pusillimonas sp. T7-7]
          Length = 288

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 100/293 (34%), Gaps = 26/293 (8%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           Y + + GL+++ G + +++        +G Y   +L +  G+  ++ +   A++  A G 
Sbjct: 18  YTIISLGLTLIFGVVRVVNFAHGDFLMVGMYLVYLLAAHVGIHPYVGLIPIAVVLFALGA 77

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
           +     ++   D      +  +     IL+    +  G      + +      TV     
Sbjct: 78  LTQKVIIEPLLDSDEHIQIFATVGLSTILLNLALVLFGANVFRASVQTGVSPITVGGFTM 137

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                 +F           +    L+  + L++ RT +  A R +  ++ A   +   + 
Sbjct: 138 VSGQIITF-----------VVAIGLAVLLHLFMHRTYLGRALRAVAQHRYAALLMGVNVK 186

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
              + AF + +AF+G+A    A            F        IV+LGGM SL      +
Sbjct: 187 HVYIVAFGLGTAFVGIAAGLLAPQYPVFPTVGTYFVLT--AFVIVVLGGMGSLYGAVAGS 244

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            I+  +  L                         +      L++++R + L  
Sbjct: 245 MIIGVIDTLAGYYI-------------APDLKEVVYFGIFLLILVVRPNGLFG 284


>gi|265993181|ref|ZP_06105738.1| LOW QUALITY PROTEIN: branched-chain amino acid ABC transporter
           [Brucella melitensis bv. 3 str. Ether]
 gi|265999153|ref|ZP_06111582.1| LOW QUALITY PROTEIN: bacterial inner-membrane translocator
           [Brucella melitensis bv. 2 str. 63/9]
 gi|262764051|gb|EEZ10083.1| LOW QUALITY PROTEIN: branched-chain amino acid ABC transporter
           [Brucella melitensis bv. 3 str. Ether]
 gi|263092451|gb|EEZ16704.1| LOW QUALITY PROTEIN: bacterial inner-membrane translocator
           [Brucella melitensis bv. 2 str. 63/9]
          Length = 299

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/294 (11%), Positives = 91/294 (30%), Gaps = 27/294 (9%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107
           + + A GL+++ G + +++         G +   ++ ++ GL  +  + +    +     
Sbjct: 18  FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 77

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +   L            A +  +      +I    +  G                  +  
Sbjct: 78  LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 126

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                    +       ++ LG   L  ++ L+L+ +    A R +  ++ A   +   +
Sbjct: 127 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGRAIRAVAQHRSAAELMGVNV 186

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
               +  F + +A +G+A    A      S     F        +V+LGG+ S+      
Sbjct: 187 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 244

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             I+  +  +                   +     ++     L+++++   L  
Sbjct: 245 ALIIGVIDTMSGYYIG-------------SDLREAVVFGIFLLILILKPSGLFG 285


>gi|328470843|gb|EGF41754.1| ribose ABC transporter permease protein [Vibrio parahaemolyticus
           10329]
          Length = 322

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 24  LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +     +  +       +    +   + +                + F  
Sbjct: 83  LCGAFAASLIAMEVPVLIAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 131 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVVVFAAAWYL 190

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 191 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGMLAALAGIIVTSRLSS 245

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 246 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 305

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 306 AKAVVILLAVLV 317


>gi|325262665|ref|ZP_08129401.1| ribose ABC transporter, permease protein [Clostridium sp. D5]
 gi|324031759|gb|EGB93038.1| ribose ABC transporter, permease protein [Clostridium sp. D5]
          Length = 338

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 107/313 (34%), Gaps = 26/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  V++ +++ +   A  S   I ++       ++ A G++ V+   G L L+     
Sbjct: 30  VIIPTVLFMVIIAIVNPAFISMANIFNVLRSTGFTLITALGMTFVL-IAGGLDLSVGSVL 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+G     ++    G  IW+ I +   +    G + G+  +K R   L +   +M     
Sbjct: 89  ALGGCVSGMVMVNLGAPIWVAILLGCGVGFLIGFLNGIIIVKCRIPALIMTLGMMYMARG 148

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + I          G+ +           +  +               +  V+L    L 
Sbjct: 149 IVYIV-------TEGVPIYPLPVQFQAIEQQDVFG-------------IPKVILICIVLG 188

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A+  ++L++T +  +   +  N++A       +    +  + ++S    ++G   ++   
Sbjct: 189 AAAHIFLKKTTVGRSIYAVGGNKEAARLSGINLDRTNIICYCITSTLAALSGIMMSSRLG 248

Query: 255 RISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ +++I      GG+ ++   A     +  +      +    +   
Sbjct: 249 SAQPNGGTGYEMTVIAAVIIGGTSTNGGIGTILGTAIGALFMNVLSNAMTILKVSVYWQN 308

Query: 310 LKFDCSFNMRHTT 322
                   +    
Sbjct: 309 FVVGFILVLAVML 321


>gi|222083132|ref|YP_002542497.1| ribose ABC transporter [Agrobacterium radiobacter K84]
 gi|221727811|gb|ACM30900.1| ribose ABC transporter [Agrobacterium radiobacter K84]
          Length = 340

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 41/323 (12%), Positives = 97/323 (30%), Gaps = 23/323 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R++  +  + +  ++             + +    + +QI I  + A G++ V+   G 
Sbjct: 21  IRISMKEAGVAIALILILAFFSATAPYFATPENFLKIFVQIAINTVLASGMTFVILVGG- 79

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+       +     LS W  I ++++ S   G I+G  +           
Sbjct: 80  IDLSVGSLLALCTVIGATIMIDPRLSPWQAIVLASLASMGTGAILGAVNGWV-------- 131

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                    + ++    +        V      +    +  + F       V   IF+  
Sbjct: 132 --CEKWKLPSFIVTLGMLNVASGLARVVSDNSTITGLPQPFVDFGNLIFWGVFPSIFLIA 189

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +++ +           R T        I  N++A           K++ F +S    G+A
Sbjct: 190 IIVVLIGWFVL-----RYTVFGRFVFAIGTNEEAVRLSGHEPKKYKVAVFTISGLTAGIA 244

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCC 299
              +    + +   +      +  I+ VI+GG        S+        IL  +     
Sbjct: 245 AMVYLLRLN-VGSPVAGIGYELNAIAAVIIGGTSLSGGKGSIIGTLVGACILQVLSTGLQ 303

Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322
            +        +       +    
Sbjct: 304 LLGADDNIKPIVIGAVIVLAVIL 326


>gi|83954599|ref|ZP_00963310.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83840883|gb|EAP80054.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
          Length = 388

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 48/367 (13%), Positives = 103/367 (28%), Gaps = 36/367 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +   L  L  +   +     G       +     + L   + A  + +V G  G+LSL  
Sbjct: 14  WFIALLGLFTLAVAIGSEATGTGLISTSMVKTLGKTLCLCLIAIAMDVVWGYCGILSLGH 73

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLL-----------------IPVSAMISGACGMIMGLP 113
              + IG Y+  +          +L                    + +            
Sbjct: 74  FAFFGIGGYAIGMWLMYARTEGIVLSSLEGQVIPPTPQEVQDAIGNQIFGVVGSSDFPWL 133

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
                  +L +  +++      ++  W    +   G+Y++     +   +   +      
Sbjct: 134 WAFSDSLFLQLLMVVIVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLWLFQNDSG 193

Query: 174 S------------------SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                              S     +  +        L   +  W+    + +  + IRD
Sbjct: 194 LRGNNGLSGLQNIPGYEDTSQATISLVFFMGSALALALGYILFAWVVSGKMGSVVQGIRD 253

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N+     L   +   KL  F +++   G+AGA +      I+P       +I +   V +
Sbjct: 254 NEARVRFLGYRVERYKLFIFTLTAVIAGIAGALYYPQAGIINPAEIAPIASIYLAVWVAI 313

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG   L       A +  +     G      N    +   +      L+ ++   V L  
Sbjct: 314 GGRGRLYGAVIGAAFVSLLSSWFTGGGAPAINLGF-YTILWTDWWLVLLGVSFVCVTLFF 372

Query: 336 SHSLLRL 342
              +  L
Sbjct: 373 PKGIGGL 379


>gi|221635490|ref|YP_002523366.1| ABC transporter ATP-binding protein [Thermomicrobium roseum DSM
           5159]
 gi|221158136|gb|ACM07254.1| ABC transporter ATP-binding protein [Thermomicrobium roseum DSM
           5159]
          Length = 289

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 100/303 (33%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +Y + A G +++ G L +++L     Y  G Y    +  R G  +   +   
Sbjct: 11  LNGLTLAALYFVVAIGFTLIFGVLRVVNLAHGSLYLFGGYVGWSVADRSGSWLLGALAAF 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +   A  ++         G  L  A + +        +                   + 
Sbjct: 71  LVAGLAGLVLELGLLRPLHGQDLREALVTIGVSIIAADLMLAKWGG----------FTYD 120

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            +   ++    R P   + Y  +  +VL     L   + + L RT +    R   D++  
Sbjct: 121 FSPPEAITGGVRIPVLGIGYPKYRLFVLAFALALGVVLWMVLTRTRLGITVRAAIDDRDM 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             ++   +     + FA+ +   G+AG    +     S +  ++      + +VI+GGM 
Sbjct: 181 VAAVGIDVQRVFAAMFAIGAGLAGLAGVVGGSVLSISSGEDARYLL--ASLIVVIVGGMG 238

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           SL   A A  ++  V +    +              F      +  + + LV+ +R   L
Sbjct: 239 SLPGTAVAAILVALVEQYSLAL--------------FPTYAAIVSFLLMVLVLAVRPQGL 284

Query: 340 LRL 342
              
Sbjct: 285 FGR 287


>gi|146342356|ref|YP_001207404.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. ORS278]
 gi|146195162|emb|CAL79187.1| Putative Branched-chain amino acid ABC transporter (permease
           protein); livH-like protein [Bradyrhizobium sp. ORS278]
          Length = 290

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 94/305 (30%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   IY + A GL+++ G L +++        +  +   +  +RYG+  +L I  
Sbjct: 11  LLNGLMLGAIYALIALGLTLIYGVLHIVNFAHGALLTVAMFMVWLACARYGMDPYLAILF 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A    A G  +    +           L+++     I+                     
Sbjct: 71  VAPAMFALGYALQRFIIGPASHSKDNGILLVTLGLSIIIENALL-----------AAFRS 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+ +   F       ++               +  + L L++T I  A R +   + 
Sbjct: 120 DTRTITTDYSFRVVELGPLLLSFPRVVGFGVTIATTLLLWLVLQQTDIGKAIRAVAKEKL 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +  ++       FA+  A + +A      S           +  ++  +IV+LGGM
Sbjct: 180 GASLVGISVPHVYAMTFAIGCACLAVAAGLLMPSFYV--SPKTGAAFVLVAFTIVVLGGM 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  V              +              + +   + +L+R   
Sbjct: 238 GSIPGALIGGLLIGVVEAASSLFLGDSLGQIG-------------IFLIFIVTLLVRPTG 284

Query: 339 LLRLR 343
           L   R
Sbjct: 285 LFGAR 289


>gi|323499252|ref|ZP_08104229.1| ribose ABC transporter permease protein [Vibrio sinaloensis DSM
           21326]
 gi|323315640|gb|EGA68674.1| ribose ABC transporter permease protein [Vibrio sinaloensis DSM
           21326]
          Length = 327

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +     +  +       +    +   + +                + F  
Sbjct: 88  LCGAFAASLIAMEVPVLIAVPTALVAGAALGAISGIIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +       +F    +  I       V++       
Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFSDTADAFAWFGTGYALGIPVPVWLMVIVFAAAWFL 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIITSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLV 322


>gi|319780321|ref|YP_004139797.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166209|gb|ADV09747.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 293

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 97/306 (31%), Gaps = 30/306 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   +  + A GLS+V G + ++++     + +GA     + +  G    L    + +I
Sbjct: 15  LVTSAVLALTALGLSLVFGVMRVVNVAHGEFFMLGAVLAWAITTAIGGHPALGFLAALVI 74

Query: 103 SGACGMIMGLPSLKF---RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           +      + L + +    R +Y   AT++ +     I+ +      G     V       
Sbjct: 75  APLIVGAIALVAERLVLRRLNYNPEATIVATIGMLYIIQQLALTFYGPEARPVEPPFS-- 132

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                     +R    +  Y  +   V+     L  +  L L RT I    R  + + + 
Sbjct: 133 ----------YRILLPWFGYSGYKLSVIAASALLLTATWLVLTRTRIGLVMRATQYDSET 182

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +    +       FA+ +    +A              +      ++   +VI+GG+ 
Sbjct: 183 AQAFGIPVGRVYGGVFALGAMLAAIAAVLIVPISQA--HYLMGQDPLLLSFIVVIIGGLG 240

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           SL     A  ++     +                         +  + + +V++ R   L
Sbjct: 241 SLRGTVVAAVLIGLSDGIISMFFSPTLAK-------------IIATLLVAMVLVFRPQGL 287

Query: 340 LRLRTP 345
              R+ 
Sbjct: 288 FGTRSR 293


>gi|298491150|ref|YP_003721327.1| inner-membrane translocator ['Nostoc azollae' 0708]
 gi|298233068|gb|ADI64204.1| inner-membrane translocator ['Nostoc azollae' 0708]
          Length = 289

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 83/288 (28%), Gaps = 13/288 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      I  + A GL++  G L L +        +GAY  +++ +        +I  
Sbjct: 10  IVNGISVGSIIALAAVGLTLTYGILRLSNFAHGDFLTLGAYLTLVVNTLGVNIWLSMILA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                 A  +   L   K R       TLI+  I   + ++   I          +    
Sbjct: 70  VVGTVAAMLLAEKLLWSKMRSIRATSTTLIIISIGLALFLRNGIIFIWGGKNQNYNLPVT 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +       +VL       + +   L++T I  A R + D+  
Sbjct: 130 PA-----------LELGQIRVPQNQLWVLGLSIVAISLLHYLLQKTKIGKAMRAVADDLD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   +    L  + +      + G+ +             +   + + + VILGG+
Sbjct: 179 LARVSGINVDRVILWTWVIGGTLTSLGGSMYG--LITAVRPNMGWFLILPLFASVILGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            +      A  I+  V E+        +   +       +       +
Sbjct: 237 GNPYGAITAAFIIGIVQEVSTPWLGSQYKQGIALLIMILVLLIRPKGL 284


>gi|126736281|ref|ZP_01752023.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. CCS2]
 gi|126714102|gb|EBA10971.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. CCS2]
          Length = 433

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 52/274 (18%), Positives = 96/274 (35%), Gaps = 21/274 (7%)

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            I L  PV  +++     ++G  +L  R DYLAIATL ++EI   +L     +  G   +
Sbjct: 160 PILLSWPVGGLLAAGAAWVIGKTALGLRSDYLAIATLGIAEIIIAVLKNEDWLARGVKNV 219

Query: 151 YVADRLYFLGTTVRSLIRF---------FRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
              DR       ++    F             +S +  +I    +   +  +   +    
Sbjct: 220 IGLDRPVPYEIDLQQDPGFVERAASLGLDPVTASTLYTKIGYAILFTIVLLIILWLAQKA 279

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +      R IRDN+ A  ++   +    L  F + SA  G+AGA       +++P  +
Sbjct: 280 LNSPWGRMMRAIRDNETAAEAMGKDVKGRHLQIFILGSAVCGVAGAMMTTLDGQLTPGTY 339

Query: 262 KFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR- 319
           +      +V  +VI+GG  +         ++  +      +     N L       +   
Sbjct: 340 QPLRFTFLVWVMVIVGGSGNNFGAVLGGMLIWWLWVQVEPLGLGMMNILSSGLEDGSALK 399

Query: 320 ----------HTTLMVIALFLVILMRSHSLLRLR 343
                         M + L LV+      L+  R
Sbjct: 400 ERMIDSAAHMRLLTMGVVLLLVLRFSPRGLIPER 433



 Score = 41.4 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 29/78 (37%)

Query: 18 LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
                 +L +  G  +       +    LI  + A G+++  G  GL ++  +   A+G
Sbjct: 9  ALFGLVAVLLIGTGMIQGWNSALLILNMGLISAIMALGVNLQWGFAGLFNIGVMGFVALG 68

Query: 78 AYSYVILGSRYGLSIWLL 95
            + V++ +      W  
Sbjct: 69 GLAAVLVSTDPVPEAWQA 86


>gi|188533806|ref|YP_001907603.1| Sugar ABC transporter permease component [Erwinia tasmaniensis
           Et1/99]
 gi|188028848|emb|CAO96710.1| Sugar ABC transporter permease component [Erwinia tasmaniensis
           Et1/99]
          Length = 345

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 44/330 (13%), Positives = 97/330 (29%), Gaps = 27/330 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLF---------LFLGATKSQKYIDSMGIQILIYVMFAWGLS 57
           RL+KY  ++   A+   + L                 S   +  +  Q+ I  + A G++
Sbjct: 20  RLHKYGIVIAFFALCLIVALVGEYQVSQGAWSDNYFFSDANMLIVLRQVSINGILAIGMT 79

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
            V+ + G + L+     A+         +            + +      + +G+     
Sbjct: 80  FVIITAG-VDLSVGSVLALSGIVAARFATNNAGMAIGDTATAVLTPLIVALGIGIVCGLI 138

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
            G  LA   L    +   +L   + +     G     +L      +              
Sbjct: 139 NGTVLARYRLQPFIVTMGMLSAARGLALLTTGGNPVSQLNNDFRWL------------GN 186

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
            Y   +   ++    L     L L +T        +  N K+  +    +I  K+  + +
Sbjct: 187 GYVAAVPVPVIIFIALFGLAWLLLNKTIFGRYVYAVGGNAKSARTSGINVIRIKVLVYTL 246

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILI 292
            +A  G+AG    A       +     E   + ++VI      GG+ +L        I+ 
Sbjct: 247 CAALAGIAGLILTARTGSAQTNAGAGYELDAIAAVVIGGTSMAGGVGTLQGTLFGVLIIG 306

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            +      +    +   +       +    
Sbjct: 307 VMNNGLDLLGVQSYYQQIIKGVLIVVAVLL 336


>gi|91786471|ref|YP_547423.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91695696|gb|ABE42525.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas sp. JS666]
          Length = 304

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 87/301 (28%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++   GL+I+ G +G++++       IGAY+  +           L+    + 
Sbjct: 18  LSLFSVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTIYLFSHLAEAYAPRLVQSYFLF 77

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++                 +       +L  W      +     +     +  T
Sbjct: 78  AIVAAFLLAFAVGWLAEWAF--IRHLYKRPLDTLLATWGLSLGMQQIFRSSFGAKEVSPT 135

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P+  +   I   +V+     ++  ++L L R+      R    N+    +
Sbjct: 136 LPDWLMGSWAPAPGLDIPINGMFVMALTLVVTCGVLLALYRSRWGLRVRATVANRVMANA 195

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+     G+AGA  A +    +         +    +V  GG  SL 
Sbjct: 196 TGINTRKTDRLTFAIGCGIAGVAGA--AFTTIGSTGPTSGSLYIVDAFLVVTFGGAASLL 253

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     +           +L                 +  ++++R   L   
Sbjct: 254 GTVVSAFGIAQTQSIAEFFMTGSMAKVLTLMT-------------IVTILMLRPQGLFAA 300

Query: 343 R 343
           +
Sbjct: 301 K 301


>gi|56708884|ref|YP_164927.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56680569|gb|AAV97234.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 312

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 53/313 (16%), Positives = 107/313 (34%), Gaps = 33/313 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                     ++  ++LI +  A   +++ G  GLLSL      AIGAY    +     +
Sbjct: 16  VPYWLGGGALALVTEMLILLAIAQSWNLLAGFGGLLSLGHHAFVAIGAYLLFAVTRDLPI 75

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S + +IP   + +    +++     + R  Y A+   + +EI + ++ +           
Sbjct: 76  SPYAMIPFCGVGAALLALVLTPILFRLREVYFAVGMWVAAEIVKIVVSRMDYF------- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                          L  F        +     Y++ L +       + WL R+      
Sbjct: 129 ----------GASSGLPLFAARRIDTSLLPSMGYWLALALTAGLCVGLWWLGRSPWGLHV 178

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF-FAASRDRISPDMFKFSENIIV 269
             +RD++ A  SL       K   F +S+A  GMAGA  F  S        F  +  +  
Sbjct: 179 HAMRDDEIAARSLGVKTGRIKALLFILSAAGSGMAGAIGFMGSLYVSPIAAFDINWTVYA 238

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           I I ++GG+ ++        + + + E                  +    +   + +   
Sbjct: 239 IFICVIGGLGTIRGPVIGVMLFVALREALS---------------ASPGWNLIALGLIAM 283

Query: 330 LVILMRSHSLLRL 342
           L+++     +  L
Sbjct: 284 LLMIFAPRGIDGL 296


>gi|332531525|ref|ZP_08407424.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
 gi|332039026|gb|EGI75453.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
          Length = 292

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 52/306 (16%), Positives = 98/306 (32%), Gaps = 24/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      +Y + A G  +     G ++     +  +GA          G   +  + +
Sbjct: 7   LVSGLGLGSMYGLMALGFYVTYAVSGTVNFAQGSSMMLGAVLTYTFAQTLGWPGYAAVLL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +    G+++ L +++   +  + A L+ +     +L      T GK    +   L  
Sbjct: 67  ALALCAVYGLLVELLAVRPFVNRGSDAWLMATVALGIVLDNVVMATYGKEPRSLPSPLAQ 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V             +        + L    L+A++ L  RRT    A   +  N+ 
Sbjct: 127 SPIEVGG---------LGLGVYPLQLLIPLVGLTLAAALHLVSRRTRWGTAMLAVVQNRA 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   I  A   AFA+S+ F G+AG   A   +  S         +   ++ ILGG+
Sbjct: 178 AARLMGIPIRRAVALAFALSALFAGIAGVLIAPLMNVHS--DMGTLFGLKAFAVAILGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS   +  A  I   V                      +     L    +   +  R + 
Sbjct: 236 TSAWGVMIAGLIFGLVEATITTTLG-------------SGYTQILTFALVIAALAWRPNG 282

Query: 339 LLRLRT 344
           L     
Sbjct: 283 LFGRAE 288


>gi|118431260|ref|NP_147600.2| branched-chain amino acid ABC transporter, permease protein
           [Aeropyrum pernix K1]
 gi|116062583|dbj|BAA79908.2| branched-chain amino acid ABC transporter, permease protein
           [Aeropyrum pernix K1]
          Length = 387

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 43/334 (12%), Positives = 101/334 (30%), Gaps = 33/334 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-------ILGSRYGLSIWL 94
           +   + +Y +    L++  G  G+      + +A+G               +    S+ +
Sbjct: 13  IVAYVAVYYVLTSSLNLKAGVTGIPDFGQAMFFAVGGIVVGNLAARIAAALAGMDPSLVI 72

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
               + +           P        +AIA+ +       +L  +  +      + +  
Sbjct: 73  AENTTTLEVLNSEFFPNRPLESIAILVVAIASALALGGLLGLLASYPALRLRGDYLAIML 132

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVI-------------YEIFMYYVLLGMCFLSASIILWL 201
            +      + +    +   S+  +               +    + L +       +  L
Sbjct: 133 LVTAEALRIYTTYSVWLMGSTPTVGLTLPSLLAWTGDPGLASILLTLAIAVAVYIYMERL 192

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF------AASRDR 255
             +      R +RD++ A  +L   +   + +A  V SA   +AG  +      A S   
Sbjct: 193 YNSPAGRLMRAVRDDEDASKALGKDVAKVRRNAMVVGSALAALAGVLYSINPLLAGSSVA 252

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAK-----ATAILIGVVELCCGMNFYYFNSLL 310
                 +        +++ILGGM+S   +A        AIL  +      +        L
Sbjct: 253 AVSIFDRMLWTFWPWALMILGGMSSNRGVAIASVVTGAAILGPIRLYKAELARLLRVDAL 312

Query: 311 KFDCS--FNMRHTTLMVIALFLVILMRSHSLLRL 342
            FD           L+   +  ++ +R   ++  
Sbjct: 313 GFDTDKFAAGLEFILIGPLILAILFLRPQGIIPE 346


>gi|17548235|ref|NP_521575.1| amino-acid transmembrane lipoprotein ABC transporter [Ralstonia
           solanacearum GMI1000]
 gi|17430481|emb|CAD17165.1| probable amino-acid transmembrane lipoprotein abc transporter
           [Ralstonia solanacearum GMI1000]
          Length = 293

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 55/303 (18%), Positives = 107/303 (35%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y +FA G ++V G LG+++L+    + +GAY+ +   + + L +W  + V
Sbjct: 6   LVNALSLGCVYALFALGFTLVFGILGVINLSHGAVFMLGAYAALQFVAHFELPLWAALLV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               SG  G+I+ +         L       +      +I                    
Sbjct: 66  GFAASGVAGLIIDVL--------LLRPLRRRNAPHLIPMIATIGAGIAINNAMQGVFGAE 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L+         V        +++    L A+++L L+RT +  A R I ++ K
Sbjct: 118 NLRFPAGLVSDASLDLGGVHLTPLELGIIVLSFALMAALMLLLKRTQLGRALRAIAESPK 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +    L     ++A  G+AG       + + P M +   +  + +++ILGG+
Sbjct: 178 AAALLGINVEGLFLLTSFAAAALGGLAGVLIGLYSNAVFPLMGQPMLHKGI-AVIILGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +         L     L            + F               LFL++L+R   
Sbjct: 237 GDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFG-------------LLFLILLVRPQG 283

Query: 339 LLR 341
           L  
Sbjct: 284 LFG 286


>gi|330937486|gb|EGH41443.1| inner-membrane translocator [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 284

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 91/284 (32%), Gaps = 16/284 (5%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS--------IWLLIPVSAMIS 103
            A G ++V G +G+++      Y IG+Y   +  +   +         +      + +++
Sbjct: 1   IAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPLLMIAGFAAAIIVT 60

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
            A G  +   + +   +   +  LI +      L     ++ G     + + L       
Sbjct: 61  SAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNFAIPNLL------- 113

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
              + F    +  V+       V +        + L++ R+ +  A R   ++ K    L
Sbjct: 114 PGSLSFGPGGAEEVLISYMQIVVFVVTLVAMTGLTLFISRSRMGRACRACAEDMKMANLL 173

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
                      F V +A   +A    +     I+P+   F   +   +  +LGG+ S+  
Sbjct: 174 GINTNNIIALTFVVGAALAAVAAMLLSMQYGVINPNA-GFLVGLKAFTAAVLGGIGSIPG 232

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
                 +L         +    +  ++ F     +       I 
Sbjct: 233 AVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 276


>gi|241207280|ref|YP_002978376.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240861170|gb|ACS58837.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 340

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/323 (12%), Positives = 95/323 (29%), Gaps = 23/323 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R++  +  + +  ++             + +    + +QI I  + A G++ V+   G 
Sbjct: 21  VRISLKEAGVAIALILILAFFSATAPYFATPENFLKIFVQIAINTVLAAGMTFVILVGG- 79

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+       +      S W  I ++ + S   G I+G              
Sbjct: 80  IDLSVGSLLALCTVIGATIMINPAFSPWQAIVLACLASMGTGAILGAV----------NG 129

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            +       + ++    +        V      +    +  + F       +   IF+  
Sbjct: 130 WICEKWKLPSFIVTLGMLNVASGLARVVSDNSTITGLPQPFVDFGNLIFWGIFPSIFLIA 189

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +++ +           R T        I  N++A           K++ F +S    G+A
Sbjct: 190 IVVVLIGWFVL-----RYTVFGRFVFAIGTNEEAVRLSGHEPKRYKIAVFTISGLTAGIA 244

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCC 299
              +    + +   +      +  I+ VI+GG        S+        IL  +     
Sbjct: 245 AMVYLLRLN-VGSPVAGIGYELNAIAAVIIGGTSLSGGKGSIVGTLVGACILQVLSTGLQ 303

Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322
            +        +       +    
Sbjct: 304 LLGADDNIKPIVIGAVIVLAVIL 326


>gi|225548145|ref|ZP_03769430.1| hypothetical protein RUMHYD_00124 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040676|gb|EEG50922.1| hypothetical protein RUMHYD_00124 [Blautia hydrogenotrophica DSM
           10507]
          Length = 299

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 89/300 (29%), Gaps = 18/300 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                IY + A G ++V G + +++L       +GA++ + L      S  +L     + 
Sbjct: 12  LQVGSIYALLAIGYTLVYGIIKMINLAHADFMMLGAFTALFLCQWLTSSGVVLWLSILIA 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                ++  +     R  Y     L       +++         +  +     +      
Sbjct: 72  LLTMAIVGLIGVFVERVAY---KPLRNRPTLSSLVAAIGVSMFLQNFLRCIPAVGPTPQA 128

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
              +          +        V+   C L A +   + +TAI      +  ++ A   
Sbjct: 129 FPVMFTSGSLSLGPITVSAIQIVVIGVSCVLMAFMQFLVSKTAIGKQMVAVSCDKDASAL 188

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +       F + SA   + G  +A+    I   M   +         +LGG+ ++ 
Sbjct: 189 MGINVNKVISITFCIGSALAAVCGILYASVYPSIHVYMAT-TIGNKAFISAVLGGIGNIK 247

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  +L  +  +    +                       + L LV+L R   LL  
Sbjct: 248 GAMLGGLLLGMIEVMLQSFDSSISYGAS--------------FVILILVLLYRPAGLLGT 293


>gi|116074193|ref|ZP_01471455.1| putative membrane protein of ABC transport system [Synechococcus
           sp. RS9916]
 gi|116069498|gb|EAU75250.1| putative membrane protein of ABC transport system [Synechococcus
           sp. RS9916]
          Length = 375

 Score = 69.5 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 42/341 (12%), Positives = 97/341 (28%), Gaps = 31/341 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +   ++  +        ++  ++  + L   + A G+ ++ G  GLLSL   I +A+G
Sbjct: 13  LLLWVVIIAAIVAAPAVLSEFRLNLLGRFLALAIVALGIDLIWGFTGLLSLGQGIFFALG 72

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF---- 133
            Y+  +          L              +           +  +A  ++  +     
Sbjct: 73  GYAAAMYLQLSSSGDLLNGIPEFFSLYGVSELPFFWHPFASPWFTLVAIWLVPGLLAAVL 132

Query: 134 -------------QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
                         +IL +   +            +           + F       + +
Sbjct: 133 GGLVFRNRIKGVYFSILTQAALLVFYNFFNGQQKLINGTNGLQTPATKLFGQYVGSELMQ 192

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
            + ++V   +  L  + + W+ R    +    IRD++             K   F ++ A
Sbjct: 193 RWFFWVTAVVVILVWAFLRWVVRGRFGDVLIAIRDDEPRLRFAGFNPTLFKTLVFGLAGA 252

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             G+ GA +       SP   +   +I ++  V +GG  +L         +     L   
Sbjct: 253 LAGIGGALYTVQSGSASPQFMEVPMSIDMVIWVAVGGRGTLVGAIFGAVGINYAKSLVSE 312

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +                     +      LV+      +  
Sbjct: 313 V--------------MPEGWLFIQGALFILVVTALPEGVFG 339


>gi|309790173|ref|ZP_07684745.1| putative branched-chain amino acid transport system / permease
           component [Oscillochloris trichoides DG6]
 gi|308227758|gb|EFO81414.1| putative branched-chain amino acid transport system / permease
           component [Oscillochloris trichoides DG6]
          Length = 374

 Score = 69.5 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 48/317 (15%), Positives = 100/317 (31%), Gaps = 22/317 (6%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              +L L+  +  +  FL      + + + ++  QI    + A G+ +V+ + G + L+ 
Sbjct: 63  RYGVLLLVVGMATVSFFLEPEVFLTWRNVSNIFRQISFNAILALGVFLVILTAG-IDLSV 121

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A+   +  +L         +++    +  G  G + GL     R  +  I TL   
Sbjct: 122 GSILALAMMTAAVLARDGYPWPLIILAPI-ITGGLVGAVNGLGLTWLRLPHPFIMTLGT- 179

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
               NI      + +G   I                +    FP SF +  I         
Sbjct: 180 ---LNIARGLTNLISGGVPISGLPEPVRWLGAGNLRLANLDFPVSFAVVLI--------- 227

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 + L+L  T        I  N +A       +    +  + V   F G++G   A
Sbjct: 228 --CYILVSLFLTYTRTGRHIYAIGGNPQAARVSGINVDRTLVFVYTVCGMFAGLSGLLLA 285

Query: 251 ASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
              +   P+     E   + +++I      GG  ++  +     ++  +  +    N   
Sbjct: 286 GRTNSGFPNAGVGQELDAISAVIIGGASFFGGRGTVLGVFAGALVIGLMRNILNLRNVPV 345

Query: 306 FNSLLKFDCSFNMRHTT 322
           F   +       +    
Sbjct: 346 FWQQVLIGVVIIVVVAL 362


>gi|163735389|ref|ZP_02142823.1| ABC-type urea transport system, permease protein II [Roseobacter
           litoralis Och 149]
 gi|161391398|gb|EDQ15733.1| ABC-type urea transport system, permease protein II [Roseobacter
           litoralis Och 149]
          Length = 322

 Score = 69.5 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 54/325 (16%), Positives = 108/325 (33%), Gaps = 19/325 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +     L L L       +  S   Q+L Y +FA  LS + G +G+L     I + +G
Sbjct: 7   ILLSIAFGLALLLAPLGLDDWRLSQLAQLLTYGLFALSLSFIWGQVGILCFGQAIFFGVG 66

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   ++       +     +  +++      +                  ++     ++
Sbjct: 67  AYVMALVTLGKFPMLGDSQLMGLLLATLAAGGVAFVLGL-----FLFGGRGITGAHLAVV 121

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                +    A    A    + G      +          +  +  Y+++ G+  L   +
Sbjct: 122 TLCAAVVIEIAAGRWAFIGGYNGLCGVPPLTTPWPREDIYLSGLETYFLVFGILVLVYFL 181

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +LWL +T+       IR N++    L   +  AKL AF +S    G+AG  FAA    +S
Sbjct: 182 LLWLTQTSFGTLLAAIRSNEERTRFLGFDVTIAKLFAFLLSGMVAGLAGGLFAAQFGFVS 241

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P +  F+ +  V+  V +GG               GV+               +      
Sbjct: 242 PQLIGFALSTEVLIWVAVGGR--------------GVLLAAVAGALLVRWGEDQLSDQLG 287

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                   +   +++++    L   
Sbjct: 288 QYWLLATGLLFIVIVVVAPRGLFGR 312


>gi|163737020|ref|ZP_02144438.1| inner-membrane translocator [Phaeobacter gallaeciensis BS107]
 gi|163740557|ref|ZP_02147951.1| inner-membrane translocator [Phaeobacter gallaeciensis 2.10]
 gi|161386415|gb|EDQ10790.1| inner-membrane translocator [Phaeobacter gallaeciensis 2.10]
 gi|161389624|gb|EDQ13975.1| inner-membrane translocator [Phaeobacter gallaeciensis BS107]
          Length = 353

 Score = 69.5 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 90/313 (28%), Gaps = 18/313 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +   +   L      S   +  +  Q+ I  + A   S+V+ + G + L+     
Sbjct: 45  LIVLVLSVIVFGLLLGSKFFSPFALTLILQQVGIVGIVACAQSLVILTAG-IDLSVGAIM 103

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +        RYGL   + +    +    CG I G    + +                
Sbjct: 104 VLSSVVMGQFTFRYGLPPEVAVACGLICGTICGFINGWLVARMKLPPFI----------- 152

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    I      +Y A+      T          F     I      Y ++ M  L 
Sbjct: 153 -VTLGMWQIVLASNFLYSANETIRSQTIAAEAPLLQLFGEKIKIGGAVFTYGVIFMVILV 211

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   LR TA       + D+ +A       +    +S + +S      AG        
Sbjct: 212 VLLAYVLRHTAWGRHVYAVGDDPEAAELSGVKVTRVLISVYMLSGLICAFAGWAMIGRIG 271

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   + +    + ++VI      GG  S+        I+         +      + 
Sbjct: 272 SVSPTSGQLANIESITAVVIGGISLFGGRGSILGTFFGALIVGVFTLGLRLLGADAQWTY 331

Query: 310 LKFDCSFNMRHTT 322
           L            
Sbjct: 332 LLIGLLIIAAVAV 344


>gi|83944048|ref|ZP_00956505.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
 gi|83845295|gb|EAP83175.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
          Length = 388

 Score = 69.5 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 48/367 (13%), Positives = 103/367 (28%), Gaps = 36/367 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +   L  L  +   +     G       +     + L   + A  + +V G  G+LSL  
Sbjct: 14  WFIALLGLFTLAVAIGSEATGTGLISTSMVKTLGKTLCLCLIAIAMDVVWGYCGILSLGH 73

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLL-----------------IPVSAMISGACGMIMGLP 113
              + IG Y+  +          +L                    + +            
Sbjct: 74  FAFFGIGGYAIGMWLMYARTEGIVLSSLEGQVIPPTPQEVQDAIGNQIFGVVGSSDFPWL 133

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
                  +L +  +++      ++  W    +   G+Y++     +   +   +      
Sbjct: 134 WAFSDSLFLQLLMVVIVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLWLFQNDSG 193

Query: 174 S------------------SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                              S     +  +        L   +  W+    + +  + IRD
Sbjct: 194 LRGNNGLSGLQNIPGYEDTSQGTISLVFFMGSALALALGYILFAWVVSGKMGSVVQGIRD 253

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N+     L   +   KL  F +++   G+AGA +      I+P       +I +   V +
Sbjct: 254 NEARVRFLGYRVERYKLFIFTLTAVIAGIAGALYYPQAGIINPAEIAPIASIYLAVWVAI 313

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG   L       A +  +     G      N    +   +      L+ ++   V L  
Sbjct: 314 GGRGRLYGAVIGAAFVSLLSSWFTGGGAPAINLGF-YTILWTDWWLVLLGVSFVCVTLFF 372

Query: 336 SHSLLRL 342
              +  L
Sbjct: 373 PKGIGGL 379


>gi|72384025|ref|YP_293379.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72123368|gb|AAZ65522.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 314

 Score = 69.5 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 58/285 (20%), Positives = 108/285 (37%), Gaps = 14/285 (4%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
                L L L    S  +   + I I+I  + A  L++++G  GLLS          AY 
Sbjct: 11  CIAGALLLMLPLAISSPFYLDLAIHIMIAALIATSLNMLLGLGGLLSFAQSALAGAAAYG 70

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             I G   G   W+L  ++  ++ A  +++G+ +L+  G  + + TL ++++   + + W
Sbjct: 71  VAIAGQHTGFGPWMLTAMAVSVAVAFSVVVGILALRTSGLSIGMITLAIAQVLWGVAMHW 130

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +T G+ GI    R         +               I  +  +     L   ++  
Sbjct: 131 GSVTGGENGIAGIARPALPWMDTDNH--------------IVWFEFVAICFLLVLCLVNR 176

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             ++ +       R   +   +L   I   +L AFA +     +AG   A  +  ISP  
Sbjct: 177 FMQSQLGRCLDGTRSQPRRMSALGFDIWGIRLFAFAFAGLVAAIAGVLLAFHQQFISPHA 236

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
               E    + +VI+GG  +L        I++G   L  G    +
Sbjct: 237 LSLGETAESLLMVIVGGPATLLGPVVGAVIVVGFRVLVSGYIESW 281


>gi|88809447|ref|ZP_01124955.1| putative membrane protein of ABC transport system [Synechococcus
           sp. WH 7805]
 gi|88786666|gb|EAR17825.1| putative membrane protein of ABC transport system [Synechococcus
           sp. WH 7805]
          Length = 375

 Score = 69.5 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 44/321 (13%), Positives = 88/321 (27%), Gaps = 31/321 (9%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------GSRYGLS 91
           +  ++  + L   + A G+ ++ G  GLLSL   I +A+G Y   +        S     
Sbjct: 33  FRLNLLGRFLSLAIVALGIDLIWGFTGLLSLGQGIFFALGGYGAAMYLQLNSSASHPNGI 92

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
                                P       +L  A L           + K +        
Sbjct: 93  PEFFSLYGVDRLPFFWEPFYNPLFTLIAIWLVPALLAALLGNMVFRNRIKGVYFSILTQA 152

Query: 152 VADRLYFLGTTV-----------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
                +                   + + F         + + +++   +  L+   + W
Sbjct: 153 ALLVFFNFFNGQQKLINGTNGLKTDVTKLFGQMVGSPEMQRWFFWITAVIVILAWLFVRW 212

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L R    +    IRD++             K   FA++    G+ GA F      +SP  
Sbjct: 213 LVRGRFGDVLIAIRDDEPRLRFTGYNPTLFKTIVFAIAGGLAGIGGALFTVQSGIVSPQY 272

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
                +I ++  V +GG  +L         ++    L                 +     
Sbjct: 273 MAVPFSIEMVIWVAVGGRGTLVGAILGAVSIMYAKSLVSE--------------AMPQSW 318

Query: 321 TTLMVIALFLVILMRSHSLLR 341
             +      LV+      ++ 
Sbjct: 319 LFIQGGLFILVVTALPEGVIG 339


>gi|170694983|ref|ZP_02886132.1| inner-membrane translocator [Burkholderia graminis C4D1M]
 gi|170140081|gb|EDT08260.1| inner-membrane translocator [Burkholderia graminis C4D1M]
          Length = 315

 Score = 69.5 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 50/318 (15%), Positives = 117/318 (36%), Gaps = 24/318 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + A GL++V+  LG+L+      Y +GAY         GL  W  +  
Sbjct: 8   LFNGISYGMLLFLMAAGLTLVLSMLGMLNFAHPAFYMLGAYFSYTFAQLLGLGYWCGLFA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G ++    L+    +  +  L+++     ++++   +  GK  +  A     
Sbjct: 68  APLCCALIGGLVERYLLRRVIQFGILGPLLLTFGLGIVIVESVTLLWGKHSVPYAVPAS- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   + F  F    + Y  +  + L+    +   +   L+ T I    R    + +
Sbjct: 127 --------LDFTLFSLYGIDYSAYRAFTLVVTIAVLGVLYGLLKGTRIGTTVRASLSHPE 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +   + + FA+ SA  G+AGA              +    +++  +V++GG+
Sbjct: 179 MVNALGHNLPRLRTNVFALGSALAGLAGALSGNIIGTEPGMAAQLGGILMI--VVVVGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT-------------TLMV 325
            SL+    +  ++  +  L       + + L+     F+   T              +  
Sbjct: 237 GSLAGAFVSALLIGILQTLTVSTPLSWSDFLMPVQHVFSGIATNEALTQPVSRFAPLVPF 296

Query: 326 IALFLVILMRSHSLLRLR 343
             + +V+ +R   L+  R
Sbjct: 297 AIVIVVLAIRPRGLMGRR 314


>gi|295110632|emb|CBL24585.1| Branched-chain amino acid ABC-type transport system, permease
           components [Ruminococcus obeum A2-162]
          Length = 291

 Score = 69.5 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 91/309 (29%), Gaps = 26/309 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +   +Y +F  G++I+ G + ++  +       G Y   +  S  GL+ +  IP 
Sbjct: 9   LISGVLAGGVYALFGVGITIIFGVMKMVDFSACAQLIWGMYFTYLFYSWTGLNCYWAIPF 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +  GA   ++    ++        + ++++      L        G            
Sbjct: 69  VVVCMGALSWVIFKLIVRPLLGSDDTSFILVTLGLSYFLQNLAEFVFGADPKS------- 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V S I+            +        M  L   + + L +T +  A R   +  +
Sbjct: 122 ----VPSEIKTSSIIIGDYSIGLPRLIAFFAMIILVLGVYMLLNKTTLGRAMRATSEKPE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L          AF +   F G++G                F     +   VI+GG+
Sbjct: 178 VAQMLGINTKKTFTIAFMIGVIFAGISGLLITPLYYVTPTAGNMFRTTAYI--AVIIGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +         +  +  L  GM       +              + +AL +V+ +R   
Sbjct: 236 GDIKGALVGGLAVGVIEALVTGMISNDLGPVG-------------VCVALLVVLYLRPQG 282

Query: 339 LLRLRTPSN 347
                    
Sbjct: 283 FFGKGERRA 291


>gi|72162181|ref|YP_289838.1| ABC transporter permease [Thermobifida fusca YX]
 gi|71915913|gb|AAZ55815.1| ABC transporter permease protein [Thermobifida fusca YX]
          Length = 357

 Score = 69.5 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 52/295 (17%), Positives = 112/295 (37%), Gaps = 17/295 (5%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
           +   ++   GL ++VG+ G +SL       IGAY+  +      +     I V  ++ G 
Sbjct: 65  VGYLMLAIAGLQLLVGASGQISLGHGAFMFIGAYATALTVLHAPMVPLAAIMVLTVVVGC 124

Query: 106 CG-MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
              +++G  + +  G YLA ATL ++     + + +  +  G  G+    R         
Sbjct: 125 LAGIVVGAATARLHGPYLAGATLALAVGLPALALYFSDVLGGSNGLLFKMRGAPPEL--- 181

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
                    +  V    +  +V+     ++  ++  L R  +    R IRD++ A     
Sbjct: 182 ---------AGLVTDNQWKAWVIWFTVLVALVVLATLSRGRLGRRLRAIRDDEAAAAMAG 232

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
             +   K++AF +S+    +AGA  A      +P  F  + ++ +++ ++LGG+ SL   
Sbjct: 233 IPVGRTKVTAFVISAGCGSLAGACEAYLLGTATPSSFSLALSLSLLAALVLGGLGSLWGA 292

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
                 L+ +      +      S        +          L ++++     +
Sbjct: 293 FWGALALVYLELAGKELADLLGLS----SSVADNVPLVFFGTLLIVIVMAWPMGI 343


>gi|27383043|ref|NP_774572.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27356217|dbj|BAC53197.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 291

 Score = 69.5 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/274 (12%), Positives = 80/274 (29%), Gaps = 13/274 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      +Y + A G  +V  +  +++        +G +         GL+ W+    
Sbjct: 8   LVSGVALGCVYGLIALGFVLVYKATEVVNFAQGDLMMLGGFFAFTFIGMMGLNYWIGFAG 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       GM+     ++    Y   + ++ +      L     +  G            
Sbjct: 68  AVAAMALFGMLAERVVVRPILGYPQFSIIMATIGLGYFLRSIAGMIWGTD---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +           ++       V+     L   + L+  RT +  A R   +N  
Sbjct: 118 -DLKIETPFSQGVLRIGSLVLAYDKLSVIAATMILCTLLWLFFNRTTLGTAMRASSENML 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A + +   +       +A+S+A    AG   A      S         +      +LGG 
Sbjct: 177 AAYYMGIPVKRVVSIVWAISAAVATCAGVLLAPITFIHS--NVGLVLGLKAFPAAVLGGF 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
            S+        ++  +  +        +  +  +
Sbjct: 235 GSIPGAVVGGVLIGVIESMAGFYLAEGWKDVAPY 268


>gi|330971014|gb|EGH71080.1| inner-membrane translocator [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 284

 Score = 69.5 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 91/283 (32%), Gaps = 16/283 (5%)

Query: 53  AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS--------IWLLIPVSAMISG 104
           A G ++V G +G+++      Y IG+Y   +  +   +         +      + +++ 
Sbjct: 2   AIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPLLMIAGFAAAIIVTS 61

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
           A G  +   + +   +   +  LI +      L     ++ G     + + L        
Sbjct: 62  AYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNFAIPNLL-------P 114

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
             + F    +  V+       V +        + L++ R+ +  A R   ++ K    L 
Sbjct: 115 GSLSFGPGGAEEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRACRACAEDMKMANLLG 174

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                     F V +A   +A    +     I+P+   F   +   +  +LGG+ S+   
Sbjct: 175 INTNNIIALTFVVGAALAAVAAMLLSMQYGVINPNA-GFLVGLKAFTAAVLGGIGSIPGA 233

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
                +L         +    +  ++ F     +       I 
Sbjct: 234 VLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 276


>gi|89071304|ref|ZP_01158466.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
 gi|89043184|gb|EAR49419.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
          Length = 433

 Score = 69.5 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 95/270 (35%), Gaps = 21/270 (7%)

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
             PV  +++     I+G  +L  R DYLAIATL ++EI   +L     ++ G   +    
Sbjct: 164 AWPVGGLLAAGAAWIIGKTALGLRSDYLAIATLGIAEIIIAVLKNEDWLSRGVKNVSGLP 223

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF---------LSASIILWLRRTA 205
           R       ++    F    + + +  +    + + + +         L   +      + 
Sbjct: 224 RPLPYEIDLQQDPAFLERAAGWGVDPVTASTIYVKLGYGVLFAVVLVLLLVLAQLALNSP 283

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS- 264
                R IRDN+ A  ++   +    L  F + SA  G+AGA       +++P  ++   
Sbjct: 284 WGRMMRAIRDNETAAEAMGKDVTRRHLQIFILGSAVCGIAGAMMTTLDGQLTPASYQPLR 343

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR----- 319
              +V  +VI+GG  +         ++  +      +     + +       +       
Sbjct: 344 FTFLVWVMVIVGGSGNNFGAVLGGMLIWWLWVQVEPIGLALMSGIAALMPEGSALAGHLL 403

Query: 320 ------HTTLMVIALFLVILMRSHSLLRLR 343
                     M + L LV+      L+  R
Sbjct: 404 DSAAHMRLLTMGVILLLVLRFSPRGLVPER 433


>gi|291279354|ref|YP_003496189.1| branched-chain amino acid ABC transporter permease [Deferribacter
           desulfuricans SSM1]
 gi|290754056|dbj|BAI80433.1| branched-chain amino acid ABC transporter, permease [Deferribacter
           desulfuricans SSM1]
          Length = 287

 Score = 69.5 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 96/309 (31%), Gaps = 26/309 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ S      IYV+ A G +I+  + G+++        IG        S   +   +  
Sbjct: 2   QFLYSGLTTGSIYVLVAIGFNIIYNTTGIVNFAQGEFVMIGGMLIYTALSLLEIPTGISF 61

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ + S   G++     L        I  + ++     IL     I  G+  + VA  +
Sbjct: 62  LLTIVGSYVLGILTERIFLNNVKLKTEINLITITLAVAIILRGSAMIIWGRDSLKVAPYI 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +              +       V+L    ++  + L+ + +    A+R   ++
Sbjct: 122 NESVFKMPG-----------GVITTSSLLVILVSIIIAVILSLFFKFSKYGKAFRACHND 170

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             A  +   ++   K+ +FA++ +  G+AG                    +   S  +LG
Sbjct: 171 PYAALNCGISVNKIKMLSFAIAGSLGGIAGILITPITFV--TYNDGIMTGLKGFSAAVLG 228

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S +       +L  +      +    +     F     +                  
Sbjct: 229 GLGSFTGAITGGYLLAILEGFFATILPSGYKDAFAFIILLIILFVL-------------P 275

Query: 337 HSLLRLRTP 345
           + L   +  
Sbjct: 276 NGLFGKKRA 284


>gi|91790962|ref|YP_551913.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91700842|gb|ABE47015.1| inner-membrane translocator [Polaromonas sp. JS666]
          Length = 320

 Score = 69.5 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 116/318 (36%), Gaps = 19/318 (5%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M    +   +   +  +  +      FL            ++  QI+I+ +FA  L + +
Sbjct: 1   MKPIPISPARLRAVEVVFWLALGASFFLLPDK-------LTLMSQIMIFGLFAVSLDMAL 53

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G++++     +  GAY+  +L        +  + ++ ++  A G  +    ++    
Sbjct: 54  GYAGIITVGHAAFFGAGAYAAGLLAKHGWSEPFSGLLLALLVCTALGYALSYLVVRGADL 113

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
              + T+ +  +   +  +  PIT G  G+         G               F ++ 
Sbjct: 114 TRLMITIGVCVLLAELANRLAPITGGSDGLQGVTIAPVFGI------------FEFDLFG 161

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
              +     +  +    +  + R+      R I D++K   ++ + +      A+A+S+ 
Sbjct: 162 RTAFVYAYCIVLVMFLGVRLVLRSPFGLTLRGIHDSRKRMLAIGSPVDARLRMAYALSAG 221

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             G+AGA  A +   +  +   F+ +  V+ I++LGG   L        + + V +    
Sbjct: 222 VAGIAGALLAQTTQFVGLESIGFNRSAEVMIILVLGGTGRLYGGLIGAIVYMLVHDWFAN 281

Query: 301 MNFYYFNSLLKFDCSFNM 318
           +N  ++   L       +
Sbjct: 282 LNPEFWMFWLGIFLISAV 299


>gi|262370829|ref|ZP_06064153.1| branched chain amino acid ABC transporter permease [Acinetobacter
           johnsonii SH046]
 gi|262314191|gb|EEY95234.1| branched chain amino acid ABC transporter permease [Acinetobacter
           johnsonii SH046]
          Length = 543

 Score = 69.1 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/291 (10%), Positives = 89/291 (30%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       IGAY+  ++ S +   +   +    + +     ++       
Sbjct: 270 ITYGLLGVINMAHGELIMIGAYTTYVVQSLFKTYLGSYVDWYLIAAIPAAFLVSALIGML 329

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         + +      +  +  S +      S  +
Sbjct: 330 IER--TVIRPLYGRQLETLLATFGVSLILMQLVRMIFGAQNVEVSNISWLSGGIALSPSL 387

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       +++    +   ++  L +T      R +  N++   ++        + AF +
Sbjct: 388 MLPYNRIAIIVFTVAVLLLLVYLLNKTRFGLFVRAVTQNRQMARAVGIRSSRIDMLAFGL 447

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG   A   +        +  +  ++ +V                +      +
Sbjct: 448 GSGLAGLAGCALAQVGNVGPDLGQNYIIDAFLVVVVG--------------GVGQVWGAV 493

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
              +      ++L+      +    L+ + + L I  R   L  ++     
Sbjct: 494 LAALGLGISGTVLEIGMGAVLAKIILL-VLVILFIQKRPQGLFAIKGRFVE 543


>gi|118588800|ref|ZP_01546208.1| inner-membrane translocator [Stappia aggregata IAM 12614]
 gi|118438786|gb|EAV45419.1| inner-membrane translocator [Stappia aggregata IAM 12614]
          Length = 360

 Score = 69.1 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 91/313 (29%), Gaps = 18/313 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +   +   L      S   +  +  Q+ I  + A   SIV+ + G + L+     
Sbjct: 52  LIVLVISLVVFGLLLGSKLFSPFALTLILQQVQIVGIVAAAQSIVILTAG-IDLSVGAIM 110

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +        RYGL + + I    +    CG + G      +     +   +   +  
Sbjct: 111 VLSSVVMGQFTFRYGLPVEISIVCGLICGTLCGYLNGFLVAIVKLPPFIVTLGMWQIVLA 170

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +     T     I     L               F +   +      Y ++ M  L 
Sbjct: 171 TNFLYSANETIRSQEIAEVAPLLQF------------FGNKVNVGGAIFTYGVIFMVVLV 218

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   LR+TA       + D+ +A       +    +S + +S      AG        
Sbjct: 219 MVLAYALRQTAWGRHVYAVGDDPEAAQLSGVQVKKVLISVYMLSGLICAFAGWAMIGRIG 278

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   + +    + ++VI      GG  S+        I+         +      + 
Sbjct: 279 SVSPTTGQLANIESITAVVIGGISLFGGRGSVLGTLFGALIVGVFTLSLRLLGADAQWTY 338

Query: 310 LKFDCSFNMRHTT 322
           L            
Sbjct: 339 LLIGILIIGAVAI 351


>gi|331699976|ref|YP_004336215.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326954665|gb|AEA28362.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 329

 Score = 69.1 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 111/303 (36%), Gaps = 33/303 (10%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +   +   +  Y + A G +++VG  G++S+   +  A G Y++ IL         + +
Sbjct: 43  PFDLRVLTLVAAYAIAAVGFNVLVGFAGVVSIGNSLFLAAGGYAWAILAVP--RGPLVAL 100

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +++    ++ GL  L+ R  Y A+ TL +  +   ++  W  +TNG AGI  A  L
Sbjct: 101 LAGVVVAVVIAVLAGLALLRLRAYYFAVGTLALGALGTVVMRNWTSVTNGDAGITGAGYL 160

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                               +     ++   + +  +   +   LR + +  A    R +
Sbjct: 161 KLF----------------GLTGVSSIFAAAVLLLAVFLYLQEALRTSPLGLAMIVGRFD 204

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                +L   +   +++AF +S+    + GA  A       PD F  +  I ++ I I+G
Sbjct: 205 PPVADALGVNVSRTRVAAFVLSAVSAAVGGALVAQLAGGAFPDQFSTTAAISLLVIPIIG 264

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G            ++I   E    ++ Y                  +  + + LV L   
Sbjct: 265 GRGWRWAPVVGAIVVIAAPEYLRFLDEY---------------RLAVYGVLVTLVALFLP 309

Query: 337 HSL 339
             +
Sbjct: 310 GGI 312


>gi|307154957|ref|YP_003890341.1| inner-membrane translocator [Cyanothece sp. PCC 7822]
 gi|306985185|gb|ADN17066.1| inner-membrane translocator [Cyanothece sp. PCC 7822]
          Length = 287

 Score = 69.1 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 89/303 (29%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +  + A GL++  G L L +        +GAY   +           +I  
Sbjct: 7   LFNGLAIGSVIALAAVGLTLSYGILRLSNFAHGDFMTLGAYITWLANINGLNLWLSIILG 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +     A  +   L     R    +  TLI+  I   + I+   +          D    
Sbjct: 67  AGGTVIAMLVSEYLIWKPMRDRRASSTTLIIISIGLALFIRNGILFIWGGSNQRYDLPVM 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +             V         +         +   L++T I  A R + DN  
Sbjct: 127 AAMDLLG-----------VKVAFDRVLAITMAIIAIIVLHFLLQKTKIGKAMRAVADNVD 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   + +  L  + ++     + GA F      I      +   + + + VILGG+
Sbjct: 176 LARVSGINVEWVVLWTWIITGVLTAIGGAIFGLIVGGI-RPNMGWFLILPMFASVILGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +         ++    EL                   +     + ++ + +++L+R   
Sbjct: 235 GNPYGAIAGALVIGVAQEL-------------SVPWLGSDYKLGVALLIMIVILLVRPQG 281

Query: 339 LLR 341
           L R
Sbjct: 282 LFR 284


>gi|229011268|ref|ZP_04168461.1| Branched chain amino acid ABC transporter, permease [Bacillus
           mycoides DSM 2048]
 gi|228750151|gb|EEL99983.1| Branched chain amino acid ABC transporter, permease [Bacillus
           mycoides DSM 2048]
          Length = 286

 Score = 69.1 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 51/301 (16%), Positives = 116/301 (38%), Gaps = 31/301 (10%)

Query: 54  WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIM 110
               +++G  G++S    + + IGAY   +L  R      + ++ I  + ++S     I+
Sbjct: 1   MSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSITNFFIGIAAAIIVSAIVSYII 60

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
           GL SL+ +  + A+ TL +S++F  +  KW+ +T+G  G        F            
Sbjct: 61  GLLSLRLKSHFYAMLTLAISQLFFVLAEKWRSLTHGGDGFTFRVPDIFRDRF-------- 112

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                        YY+          ++    +++I    + I  N++   +L   ++  
Sbjct: 113 -----------TFYYITFICLISIFILLRLFTKSSIGKVLKAISQNEQRVEALGYKVLHY 161

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           K+ A  V+     ++G  F  +   ++  +F     +  + + ++GG+ +L         
Sbjct: 162 KIIASVVAGVVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGVGTLI-------- 213

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              +       +  Y+ S L  +     R T ++ +   +V+L+    L+         +
Sbjct: 214 -GAIAGAGIIESLKYYLSELATEYPIFERWTIILGLLYIIVLLVFPKGLVGTVKKLKNFK 272

Query: 351 R 351
           R
Sbjct: 273 R 273


>gi|149188639|ref|ZP_01866931.1| ribose ABC transporter permease protein [Vibrio shilonii AK1]
 gi|148837549|gb|EDL54494.1| ribose ABC transporter permease protein [Vibrio shilonii AK1]
          Length = 326

 Score = 69.1 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 28  LIALIFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 86

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +     +  +       +    +   + +                + F  
Sbjct: 87  LCGAFAASLIAMEVPVLIAVPTALLAGAALGAISGIIIAK------------GKVQAFIA 134

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 135 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYAMGIPVPVWIMVIVFAAAWYL 194

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 195 L-----NHTRFGRYVYALGGNESATRLSGINVDKVKIGVYAICGLLAALAGIIVTSRLSS 249

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 250 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 309

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 310 AKAVVILLAVLV 321


>gi|170741681|ref|YP_001770336.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168195955|gb|ACA17902.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 301

 Score = 69.1 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 43/300 (14%), Positives = 96/300 (32%), Gaps = 17/300 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I    Y M + GL+I+ G L +++      + + A+   I  ++ G  + +        
Sbjct: 17  LIAGCFYAMLSMGLAIIFGLLNIINFTHGAQFMMAAFLAWIGLTQVGPWLGMPEFQIGFW 76

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                  + + +L    + L +  L   +    +L+ +  +     G++           
Sbjct: 77  PALLVAPLCVAALGMAVERLLLRRLSHLDHLYGLLLTF-GVALVTEGLFRHAYGVSGQGY 135

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                        F++   +  +V+     +  S      RT +    R   +N +   +
Sbjct: 136 EPPESLQGPVDVGFMLLPKYRVFVVGASLLICLSTWYAFERTRLGAYLRAGTENPRLLQA 195

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
               +      A+    A  G+AG   A                 IV ++V++GG+ S+ 
Sbjct: 196 FGINVPLMITLAYGFGVALAGLAGVLAAPIMQVTPLMGGSILN--IVFAVVVIGGLGSIL 253

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   L  V  +   +              +    T ++ + + LV+L+R   L   
Sbjct: 254 GAMVTGLGLGLVEGVTKVV--------------YPEASTVVIFVIMALVLLLRPAGLFGR 299


>gi|226953359|ref|ZP_03823823.1| branched chain amino acid ABC transporter permease [Acinetobacter
           sp. ATCC 27244]
 gi|226835897|gb|EEH68280.1| branched chain amino acid ABC transporter permease [Acinetobacter
           sp. ATCC 27244]
          Length = 544

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/291 (10%), Positives = 88/291 (30%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       IGAY+  ++ S +      L+    + +     ++       
Sbjct: 271 ITYGLLGVINMAHGELIMIGAYTTYVVQSFFKTHFVGLVDWYLLAAIPAAFLVSALIGML 330

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         + +      +  +  S +      +  +
Sbjct: 331 IER--TVIRPLYGRQLETLLATFGVSLILMQLVRMVFGAQNVEVSNVSWLSGGIALTPSL 388

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++     +   ++  L +T      R +  N++   ++        + AF +
Sbjct: 389 MLPYNRIAIIAFTIAVLLLLVFLLNKTRFGLFVRAVTQNRQMARAVGIRSARIDMLAFGL 448

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG   A   +        +  +  ++ +V                +      +
Sbjct: 449 GSGLAGLAGCALAQVGNVGPDLGQNYIIDAFLVVVVG--------------GVGQVWGAV 494

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
              +      ++L+      +    L+ + + L I  R   L  ++     
Sbjct: 495 LAALGLGISGTVLEIGMGAVLAKIILL-VLVILFIQKRPQGLFAIKGRFVE 544


>gi|220936270|ref|YP_002515169.1| urea ABC transporter, permease protein UrtB [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219997580|gb|ACL74182.1| urea ABC transporter, permease protein UrtB [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 307

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 98/301 (32%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++ A GL+I+ G + ++++       IGAY+  ++ S         I     +
Sbjct: 21  LSFFSVLLLMALGLAIIYGQMRVINMAHGEFMVIGAYTTYMISSLVATHAPWAIDYYIFL 80

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     I            + +   +       +L  W      +           +   
Sbjct: 81  AIPLAFIAAFLVGL--FIEVVMIRHLYHRPLDTLLATWGLALIMQQIFRSTFGAREVSPR 138

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   ++    P+  +   I    +++   F++ ++  ++ ++      R    +++   +
Sbjct: 139 LPDWLQGSWQPTPMIDIPINGMSIMVLTLFVTIAVFWFMFKSRWGLRVRCTMASREMSGA 198

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +     +     FAV     G+AGA  A +    +         +    +V+ GG  SL 
Sbjct: 199 VGINTKWVDRITFAVGCGIAGIAGA--AFTTISSTGPTSGTLYIVDTFLVVVFGGAASLL 256

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +  ++     L           +              +++A+ +++++R   L   
Sbjct: 257 GTVASAFVIAQGQSLLEFFLGASMAKVS-------------ILLAVIVILMLRPEGLFAS 303

Query: 343 R 343
           +
Sbjct: 304 K 304


>gi|126664340|ref|ZP_01735324.1| inner-membrane translocator [Marinobacter sp. ELB17]
 gi|126630666|gb|EBA01280.1| inner-membrane translocator [Marinobacter sp. ELB17]
          Length = 289

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 95/303 (31%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL+IV G L +++      Y +GAY    L +  G+  W  + +
Sbjct: 8   LLNSLDIGLLLFIIAVGLNIVFGVLNIINFAHGALYMLGAYLAFTLINIVGMPFWAALLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +      +++    L++        +L+++     I+ +   +  G     V      
Sbjct: 68  APLGVAILAVLIDRFLLRYIYSRDIADSLLLTFALLLIINESVRMIWGSGIQVVQPP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +              +  +V++    L A +     RT I    R    ++ 
Sbjct: 125 -------QLLAGSMDIMGSSIPTYSLFVIVMGLALLAGLWFLFNRTRIGRIMRAAALDRD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           FA  +    + G   A    R           I    +V++GG+
Sbjct: 178 MAEVLCINTRLVVTGVFAFGAWLAAVGGVIAAP--MRALDPGMGDKIIIESFIVVVIGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         IL  +                     F   +  L  + + LV+L + + 
Sbjct: 236 GSFPGALLGAIILGLIHGFGGRY--------------FPEVNMLLPFLGMALVLLFKPNG 281

Query: 339 LLR 341
           ++ 
Sbjct: 282 IMG 284


>gi|187925881|ref|YP_001897523.1| branched-chain amino acid ABC transporter inner membrane protein
           [Burkholderia phytofirmans PsJN]
 gi|187717075|gb|ACD18299.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
          Length = 294

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 106/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGVPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGFS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +GL  W+++ ++ ++ G  G+ +    L++      +  L+++     ++        G
Sbjct: 63  YFGLPYWVMLVLAPLVVGLFGIAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 123 SSGQPYDVPSALSGAT----------NLGFMFLPNYRAWVVVASLAVCFATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGINVPLMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +  L                  +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSIMGSILTGLLLGVIEGLTRVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + LV+L+R   L  
Sbjct: 277 IMALVLLVRPAGLFG 291


>gi|254505813|ref|ZP_05117959.1| ribose high-affinity ABC transporter permease component [Vibrio
           parahaemolyticus 16]
 gi|219551466|gb|EED28445.1| ribose high-affinity ABC transporter permease component [Vibrio
           parahaemolyticus 16]
          Length = 327

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 28/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +     +  +       +    +   + +                + F  
Sbjct: 88  LCGAFAASLIAMEVPVLIAVPTALVAGAALGAISGIIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVIVFAAAWFL 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIITSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLV 322


>gi|91978749|ref|YP_571408.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91685205|gb|ABE41507.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 357

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 100/320 (31%), Gaps = 17/320 (5%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
              +L    +    +  Y        LI++  A GL ++ G  G+LS    + + +  Y+
Sbjct: 21  FLVVLAGALIYPVFADSYDVGNFSYFLIWIFMALGLCLIWGYGGMLSFGQTLFFGVAGYA 80

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L    G        + A++      ++    L +   +  I  +    +  +  +  
Sbjct: 81  YGVLAINMGGG---TTTIVALVVSVVIAMIAAGILGYFMIWGGINGIFFGIVTLSATLVL 137

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
                  AG         L               S  I    +YY+++G+  +    +  
Sbjct: 138 AFFLGQTAGPEWRIGDARLNGFNGMKGMDPLAIGSVYIEGSALYYLMVGLIVVVYLALRM 197

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  + + N     R+N +    L   +   +L  F + S   G++GA + +    I+P  
Sbjct: 198 LVNSGVGNVIVATRENPQRAEMLGYDVRKYQLLTFVIGSGLAGLSGALYTSWGQFITPSS 257

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
                  + I  V   G   L+     + +L+   +     +                  
Sbjct: 258 IGLPAAAMPIVWVAFSGRNDLTATLVGSFLLLFGFQTITVYS--------------QQAA 303

Query: 321 TTLMVIALFLVILMRSHSLL 340
             LM   L   ++      +
Sbjct: 304 LVLMGALLLATVMAAPQGFV 323


>gi|323492277|ref|ZP_08097435.1| ribose ABC transporter permease protein [Vibrio brasiliensis LMG
           20546]
 gi|323313590|gb|EGA66696.1| ribose ABC transporter permease protein [Vibrio brasiliensis LMG
           20546]
          Length = 327

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 28/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +     +  +       +    +   + +                + F  
Sbjct: 88  LCGAFAASLIAMEVPVLIAVPTALLAGAALGAISGVIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVIVFAAAWYL 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLV 322


>gi|153011797|ref|YP_001373010.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
 gi|151563685|gb|ABS17181.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
          Length = 295

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 96/306 (31%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A GL++V   +GL++           Y        +GL   L   +
Sbjct: 8   LVNALSLGGTYALLALGLAVVFSIMGLINFAHGELMTAAGYGL-CFALLFGLPFGLATVL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  ++ A  ++M   + +          L+ S     IL              V   +  
Sbjct: 67  AMAVAIALVLLMERTAFRPVRGASGTTLLLTSFAVSAILRVLFQNFISARPKPVPMPMSL 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            GT               +   +     +L    +   + L+LR T +  A R   ++  
Sbjct: 127 SGT----------IEIGGLNIGVIQAISILVTVIMLVGLNLFLRTTVLGRAMRAAAEDFA 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         +AFA+S    G+AG  + A R  + P M  F   +      I+GG+
Sbjct: 177 IVRLMGIRANAVVATAFAISGLLAGVAGILWVAQRGSVDPLM-GFLPVLKAFIAAIIGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SLS       +L  +                    +         ++ +  V+L     
Sbjct: 236 GSLSGAVAGGFLLGFIEVFLQAY----------LPENLISYRDAFTILLVIAVLLFAPQG 285

Query: 339 LLRLRT 344
           LL  +T
Sbjct: 286 LLARKT 291


>gi|311742144|ref|ZP_07715954.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter permease protein [Aeromicrobium marinum DSM
           15272]
 gi|311314637|gb|EFQ84544.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter permease protein [Aeromicrobium marinum DSM
           15272]
          Length = 298

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 95/306 (31%), Gaps = 19/306 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +   Q  IY + A G  ++  S  ++S        IG          +GL  W+ + +
Sbjct: 8   VVNGFGQGSIYALLALGYVMIYKSTKVISFAQPALMVIGGLFAYHFTREFGLPFWIGMAL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     GMI+   +L+           I++     +L        G     V      
Sbjct: 68  AIVAGAIVGMIVERLALRPMIGKPVFTLAIITIGVDIVLRIISNRYIGVESRIVTYP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                       R     +        ++        ++ L+ R +    A R    +Q+
Sbjct: 125 --------NGSNRISIGEISITQQRLGLIAVTAVTVVALGLFFRYSRTGLAMRATALDQE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +      A+A++     +AG F A     I  D   +   +  +  +I+GG+
Sbjct: 177 TALAQGIRVGVIFALAWAIAGGLAAIAGTFVATGAAGI--DQNTWIIALKALPAIIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL         +  V  L       Y   L       N          + LV+L+R + 
Sbjct: 235 DSLQGAVIGGLAVGLVEALTATYQPDYAPWLG------NNFALVAPYALMLLVLLVRPYG 288

Query: 339 LLRLRT 344
           L   + 
Sbjct: 289 LFGTKE 294


>gi|186477791|ref|YP_001859261.1| inner-membrane translocator [Burkholderia phymatum STM815]
 gi|184194250|gb|ACC72215.1| inner-membrane translocator [Burkholderia phymatum STM815]
          Length = 294

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 104/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLTWMGLS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            + L  W+++ ++ ++ G  G+ +    L++      +  L+++     ++        G
Sbjct: 63  YFSLPYWVMLVLAPVLVGLFGVAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 123 SSGQPYDVPSALSGAT----------NLGFMFLPNYRAWVVVASLIVCFATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMVTLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +                     +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSIMGSILTGLLLGVIEGFTRVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + LV+L+R   L  
Sbjct: 277 IMALVLLVRPAGLFG 291


>gi|89070734|ref|ZP_01157996.1| probable transmembrane abc transporter protein [Oceanicola
           granulosus HTCC2516]
 gi|89043692|gb|EAR49897.1| probable transmembrane abc transporter protein [Oceanicola
           granulosus HTCC2516]
          Length = 327

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 58/333 (17%), Positives = 129/333 (38%), Gaps = 26/333 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +     +   ++L + +G      Y      +ILI ++F   L +V+G  G+ +L 
Sbjct: 11  RRPLLAGRGLLWEAVILAVGVGLFFLFPYDLGFLSRILIMIVFVLSLDLVLGYAGVATLG 70

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
               Y  GAY+  ++      S  L +   A+       + GL  ++  G  L + ++ +
Sbjct: 71  QAAMYGTGAYAAGLIAIHVTASPLLGLAAGAVAGAGIAFVSGLVLMRAHGLTLLMLSIAV 130

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +++ Q +  K +P+T G  G+        LG      I                Y+ +L 
Sbjct: 131 AQVLQEVANKARPLTGGADGLRGIRMDPILGLWEFDFIGRAG------------YWYVLT 178

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L    +  +  + +  + R I+++ +   ++ T + +  +  + ++    G+AGA  
Sbjct: 179 VLILVLLFLKVVVNSPLGLSARGIQESPERMRAIGTPVYWRLVWIYTIAGGIAGVAGALA 238

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A     +S ++F F  +   + +++LGG   L       AI + V  +   ++ + +   
Sbjct: 239 AQVTALVSLEVFNFDHSAEALIMLVLGGAGRLYGAVVGVAIFMLVEHVAAAVDPFNW--- 295

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                        L+   +  V+      LL L
Sbjct: 296 -----------LFLIGALVLAVVFFVPAGLLGL 317


>gi|327481918|gb|AEA85228.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas stutzeri DSM 4166]
          Length = 295

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 47/316 (14%), Positives = 105/316 (33%), Gaps = 26/316 (8%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L   +  +     +    I    Y + + GL+I+ G L +++      Y +GA+   +  
Sbjct: 3   LLFGVPLSVLLGQLLLGLINGAFYALLSLGLAIIFGLLRIINFAHGAQYMLGAFVAFLGL 62

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           +  G+S W  + ++ ++ G  GM +    L+       +  L+++     I+        
Sbjct: 63  NYLGVSYWFALVLAPLLVGCLGMAIERGLLRRIAGEDHLYGLLLTFGLALIVEGSFVKLF 122

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G +G                 +    F   F+    +  +V++    +  +    + RT 
Sbjct: 123 GVSGSSYPMP----------ELLRGGFNLGFMFLPTYRAWVIVAALVVCLATWYVIERTR 172

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           + +  R   +N K        +       +    A    AG   A             + 
Sbjct: 173 LGSYLRAGTENPKLMQGFGINVPLLVTLTYGYGVALAAFAGVLAAP--IYAVTPGMGSNL 230

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
            I+V ++V++GGM S+         +  +  L                  +     T++ 
Sbjct: 231 LIVVFAVVVIGGMGSILGAIVTGIAMGLIEGLTKVF--------------YPEAANTVVF 276

Query: 326 IALFLVILMRSHSLLR 341
           + +  V+L+R   L  
Sbjct: 277 LVMVAVLLIRPAGLFG 292


>gi|163801644|ref|ZP_02195542.1| ribose ABC transporter permease protein [Vibrio sp. AND4]
 gi|159174561|gb|EDP59363.1| ribose ABC transporter permease protein [Vibrio sp. AND4]
          Length = 327

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/312 (9%), Positives = 88/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALLFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + +     +  +       +    +   + +                + F  
Sbjct: 88  LCGAFAASMIALEVPVLIAVPTALFAGAALGAISGIIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F        Y + +   +  M  + A
Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISAGFTDTADAFAWFG-----TGYALGIPVPVWMMVVVFA 190

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           ++   L  T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 191 AVWYLLNHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGMLSALAGIIVTSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYFQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLI 322


>gi|119387818|ref|YP_918852.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119378393|gb|ABL73156.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 303

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 107/307 (34%), Gaps = 15/307 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     ++  + A GL++V G +GL++L     Y  GA++   + +  G     L+   
Sbjct: 8   LNGLQYGMMLFLMAAGLTLVFGVMGLINLAHGSLYMTGAFACAAVAAATGSFWLGLVASL 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           A  + A  ++      +          L   +    +L  +  I     G       + L
Sbjct: 68  AAAAAAGALVEIAVIRR----------LYARDHLDQVLATFALILVFSEGTRWLFGSFPL 117

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              + + +         + Y +F   ++     ++  +   + RT +    R    +++ 
Sbjct: 118 YLKLPAALSGAVVLPGGLHYPLFRLVIIGFGAAVAVGLWWLITRTRLGIRIRAGEADREM 177

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   I       FA+ +A  G+AGA     +             I+   +V++GG+ 
Sbjct: 178 IGALGVDIARLYTIVFALGAALAGLAGALVGTIQSV--QVGMGEPVLILAFVVVVIGGIG 235

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN---MRHTTLMVIALFLVILMRS 336
           S+        ++     L   +     + +     +        + L+ + + +V+++R 
Sbjct: 236 SIKGALVGALLVGMTDTLGKALLPGLLSRVWDASSANTIGASLASVLIYVLMAVVLILRP 295

Query: 337 HSLLRLR 343
             L   R
Sbjct: 296 QGLFGAR 302


>gi|254512692|ref|ZP_05124758.1| inner-membrane translocator [Rhodobacteraceae bacterium KLH11]
 gi|221532691|gb|EEE35686.1| inner-membrane translocator [Rhodobacteraceae bacterium KLH11]
          Length = 335

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 38/316 (12%), Positives = 97/316 (30%), Gaps = 21/316 (6%)

Query: 11  YDKILCLLAVVYPLLLF-LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           Y K+L   +++  L+ F +          + ++     +  + A   ++V+   G + L+
Sbjct: 22  YQKLLAFASLIVLLIGFSIASPNFMQTSNMIAILQATSVNGVLAVAATLVI-ITGGIDLS 80

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                   A    ++ +  G+ + L +  +      CG+  G    K +           
Sbjct: 81  VGTLMTFCAVIAGVVLTYMGMPLLLGVAAAIASGAFCGLCSGTFVAKMKIPPFIAT---- 136

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                   +    I  G + +    R  +   T              V+    +   +L 
Sbjct: 137 --------LGMMLILKGLSLVISGTRPIYFNDTPGFDQISRGSLIGEVVPAFPIPNGVLI 188

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  ++ +    L RT +      +  N++A           K+  +A++ A  G+ G   
Sbjct: 189 LFLVAIAASYILGRTVLGRYTFALGSNEEAVRLSGVNTDAWKMRVYALAGAICGIGGILI 248

Query: 250 AASRDRISPDMFKFSENIIVISIVILGG------MTSLSKIAKATAILIGVVELCCGMNF 303
           A+  +            +  I+ V++GG        ++        I+  +      ++ 
Sbjct: 249 ASRLNSAQ-PALGLGYELEAIAAVVIGGTSLSGGRGTILGTLIGALIMAVLTNGLRVLSV 307

Query: 304 YYFNSLLKFDCSFNMR 319
                 +       + 
Sbjct: 308 AQEWQTVVTGAIIILA 323


>gi|149203678|ref|ZP_01880647.1| inner-membrane translocator [Roseovarius sp. TM1035]
 gi|149142795|gb|EDM30837.1| inner-membrane translocator [Roseovarius sp. TM1035]
          Length = 306

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 106/305 (34%), Gaps = 15/305 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     ++  + A GL+++ G +GL++L     Y IGA++            W+     
Sbjct: 11  LNGLQFGVMLFLMAAGLTLIFGVMGLINLAHGSLYMIGAFAAA----------WVAGLTG 60

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           + +      +          + L I  L   +    +L  +  I     G       + L
Sbjct: 61  SFLLALAASLAAAAVAGVLIELLVIRRLYDRDHLDQVLATFALILILSEGTRWVFGSFPL 120

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                  +         + Y  +   ++     ++A++   + +T +    R   ++++ 
Sbjct: 121 YLDTPDWLSGTLRLPFGIDYSRYRLAIIGAGLVIAAALFAMISKTRLGIRIRAGENDREM 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+ 
Sbjct: 181 IAALGVNISALYTLVFALGAALAGLAGALIGAIQSV--QVGMGEPVLILAFVVIVIGGIG 238

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM---RHTTLMVIALFLVILMRS 336
           S+        ++     L   +    F + L+   + ++     +  + I +  V++ R 
Sbjct: 239 SIKGAFIGALLVGLTDTLGRALLPSAFATFLEPAAANSVGASLASMAIYILMAGVLIFRP 298

Query: 337 HSLLR 341
             L  
Sbjct: 299 RGLFG 303


>gi|146280812|ref|YP_001170965.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas stutzeri A1501]
 gi|145569017|gb|ABP78123.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas stutzeri A1501]
 gi|327479080|gb|AEA82390.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas stutzeri DSM 4166]
          Length = 295

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 110/304 (36%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y M + GL+I+ G L +++      Y IGA++  +L +  G+  W  + +
Sbjct: 16  LLIGLINGSFYAMLSLGLAIIFGMLKIINFAHGAQYMIGAFAGYLLLATLGIGYWPALIL 75

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G C  ++   +L    +   + +L+ +      L        G +G   A     
Sbjct: 76  APIVVGLCSAVIERLALSRLYNLDHLYSLLFTFGLALALEGAFRYFYGSSGQPYAVP--- 132

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        +   F+    +  +V+L    +  +  L + +T +    R   +N  
Sbjct: 133 -------KELAGGYNLGFMFLPKYRAWVVLASLVICIASWLLIEKTKLGAYLRAATENPT 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       + + +A  G+AG   A         +   +  I+V ++V++GGM
Sbjct: 186 LVRTFGINVPLLLTFTYGMGAALAGLAGMLAAPIYQV--SPLMGSNLIIVVFAVVVVGGM 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L  +  L                  +      ++ + + +V+L+R   
Sbjct: 244 GSILGAIITGYLLGILEGLTKVF--------------YPEASNIVIFVIMAIVLLVRPAG 289

Query: 339 LLRL 342
           L+  
Sbjct: 290 LMGR 293


>gi|125974326|ref|YP_001038236.1| inner-membrane translocator [Clostridium thermocellum ATCC 27405]
 gi|256003454|ref|ZP_05428444.1| urea ABC transporter, permease protein UrtB [Clostridium
           thermocellum DSM 2360]
 gi|281418382|ref|ZP_06249402.1| urea ABC transporter, permease protein UrtB [Clostridium
           thermocellum JW20]
 gi|125714551|gb|ABN53043.1| urea ABC transporter membrane protein [Clostridium thermocellum
           ATCC 27405]
 gi|255992478|gb|EEU02570.1| urea ABC transporter, permease protein UrtB [Clostridium
           thermocellum DSM 2360]
 gi|281409784|gb|EFB40042.1| urea ABC transporter, permease protein UrtB [Clostridium
           thermocellum JW20]
 gi|316941473|gb|ADU75507.1| urea ABC transporter, permease protein UrtB [Clostridium
           thermocellum DSM 1313]
          Length = 302

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/284 (11%), Positives = 78/284 (27%), Gaps = 16/284 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G + ++++       IGAY+  ++ + +   +         I+    +   +     
Sbjct: 27  ITFGLMRIINMAHGEMIMIGAYTTYMVQNLFISFLGERYFDLYFIAA-IPLSFLITGFVG 85

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
               ++I   +      ++L  W      +           +       +         +
Sbjct: 86  YLLEISIVKRLYGRTLDSLLATWGISLILQQLARNIFGAPNVDVRSPRWLNGGVVVFGNI 145

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                  +++L      A + L+L ++      R +  N+    SL           FA+
Sbjct: 146 QLPYKRLFIILLAALCIAGVYLFLFKSDSGRRIRAVMQNRSMAESLGINTRKVDSMTFAI 205

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG                 +  +    +V+LGG+  +       A +      
Sbjct: 206 GSGLAGIAGCALTLLGSI--GPTLGTNYIVDTFMVVVLGGVGRIIGTVAGAAAIGIGNTT 263

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                                    L+ +A+ L +  +      
Sbjct: 264 FEYFTNASLGK-------------VLVFLAVILFLQWKPQGFFS 294


>gi|182677964|ref|YP_001832110.1| urea ABC transporter, permease protein UrtB [Beijerinckia indica
           subsp. indica ATCC 9039]
 gi|182633847|gb|ACB94621.1| urea ABC transporter, permease protein UrtB [Beijerinckia indica
           subsp. indica ATCC 9039]
          Length = 308

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 96/298 (32%), Gaps = 17/298 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   I+V+ A GL+I+ G +G++++       +GAY   +  + +   +  L  +   +
Sbjct: 22  LILFSIFVLMALGLAIIFGQMGVINMAHGEFMILGAYMTYLTSNLFQTYLPSLYSIYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           + A   +             ++   +       +L  W      +           +G  
Sbjct: 82  AMAVAFLASGALGLLVEW--SMIRFLYKRPLDTLLATWGLSLILQQSYRSIFGAREVGVE 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +      +  +  +I   +V+     ++ S+ L L R++     R +  N+    +
Sbjct: 140 LPPWMMGSLPVTGTIEVQINGLFVMGLTVVITLSVYLLLYRSSWGKQVRAVMQNRVMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           F +     G+AG+ F       +         +    +V+ GG  SL 
Sbjct: 200 VGINTEKTDRYTFGLGCGIAGIAGSAFTMIGS--TGPTAGQLYIVDTFLVVVFGGAQSLL 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
            +  +   +                               L ++ + +++++R   L 
Sbjct: 258 GVIASAFTISQAQSTLEFFLSGSMAK-------------VLTLLGVVVILMIRPQGLF 302


>gi|196234611|ref|ZP_03133430.1| inner-membrane translocator [Chthoniobacter flavus Ellin428]
 gi|196221315|gb|EDY15866.1| inner-membrane translocator [Chthoniobacter flavus Ellin428]
          Length = 243

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 74/181 (40%), Gaps = 15/181 (8%)

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
               ++   F        I  +  +    G+  ++  ++  L  +     +  + D++ A
Sbjct: 70  RVIFQTSDTFGAATGLTGIPTLTSFAWAWGLAAVTVYVVASLVNSTYGRGFIAVHDDEIA 129

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             ++    +  K++AF V + F G+AG  ++  +  ISP  F F ++I ++ +VILGGM 
Sbjct: 130 ASAMGINPVRYKVTAFVVGAFFAGIAGGLYSHHKAVISPGGFDFLKSIEIVVMVILGGMG 189

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
               +  A  +L  + EL  G++ Y                  +  + +  ++L R   L
Sbjct: 190 RTVGVILAAVLLTILPELLRGVSEY---------------RMIIYSLLIIAIMLTRPQGL 234

Query: 340 L 340
            
Sbjct: 235 F 235


>gi|89901166|ref|YP_523637.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89345903|gb|ABD70106.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 429

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 41/330 (12%), Positives = 111/330 (33%), Gaps = 31/330 (9%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++      L+ L      +     +M  Q+ I ++     +I++G  G+LS    +   +
Sbjct: 16  VVIWTLFALVLLTAPLLFTSSLSQTMLSQMGIAIIVCLSYNILLGQGGMLSFGHAVYSGM 75

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD----YLAIATLIMSEI 132
           G++  +   ++      L + +  +  G   M + +              A+ TL + E+
Sbjct: 76  GSFLAIHTLNQVSGGWPLPVSLVPIAGGLASMAVAILLGWVTTKKAATPFAMITLGIGEL 135

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
              + + +     G+ G+              + +   +        +I +YY++    F
Sbjct: 136 VWAMSLMFPEFFGGEGGVS------------GNRVAGAKTFGISYGPQIELYYLIAVYTF 183

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +   ++    RT +      +RDN +    +       +  AF +++ F G++G   A +
Sbjct: 184 ICTGLMFAFTRTPLGRMLNAVRDNPERVEFVGYDTQKVRYIAFIIAAFFAGISGGLAALN 243

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
            + ++ ++     +   +    LGG T          +++    L       +       
Sbjct: 244 FEIVTSEVVSGYRSGAYLLFTFLGGATFFFGPIIGAILMVLAFVLLSEFTKAW------- 296

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                      + +    +++     +  L
Sbjct: 297 --------LLYLGLVFLFMVMYAPGGVASL 318


>gi|111220205|ref|YP_710999.1| high-affinity branched-chain amino acid ABC transporter membrane
           protein [Frankia alni ACN14a]
 gi|111147737|emb|CAJ59396.1| high-affinity branched-chain amino acid transport protein (ABC
           superfamily, membrane) [Frankia alni ACN14a]
          Length = 365

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 88/319 (27%), Gaps = 22/319 (6%)

Query: 32  ATKSQKYIDSM--GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-----SYVIL 84
               Q +  ++   +   +Y + A G ++V G L L++      + +G++     +  +L
Sbjct: 57  GFLDQFWQLTIDGLMVGSLYAVIALGYTLVYGVLQLINFAHSEVFMLGSFGGLFVARALL 116

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                +   L       +    G + G  +               S      LI     +
Sbjct: 117 PDDGSVPGGLASVGLVAVGLGAGAVCGGLAAFTLERVAYRPLRRRSAPRLAYLISAIGAS 176

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                +   +                 F             +      +   +   +  T
Sbjct: 177 LFAVNLAGKEFGRQNVDLPDLFHNGTVFTVFGADVSTQSLVIFAVAVAMLIGLDRLVAGT 236

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            +    R +  +      +   +    +  F V     G  G  +A + +        F 
Sbjct: 237 RLGQGIRAVAQDADTAVLMGVNVERIIIVTFVVGGLLAGAGGFLYAMTFNA--SYSMGFV 294

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
             +   +  +LGG+ ++        +L  V      +    +  ++ F            
Sbjct: 295 PGVKAFTAAVLGGIGNVRGAMLGGLLLGLVESYGGYLFQASYKDVIAF------------ 342

Query: 325 VIALFLVILMRSHSLLRLR 343
            + L  ++++R   LL  R
Sbjct: 343 -LVLVAILMIRPSGLLGER 360


>gi|78060708|ref|YP_367283.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia sp. 383]
 gi|77965258|gb|ABB06639.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia sp. 383]
          Length = 315

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 54/330 (16%), Positives = 113/330 (34%), Gaps = 39/330 (11%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            ++L   L       Y  ++ I I I  M A  L  V+  +G L+      + +GAY+  
Sbjct: 12  AVVLATVLSVAAGSGYAGNLVIWIAIAAMMASSLRFVL-LIGELNFAVAAFFGLGAYASG 70

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
              + + L   + +  S +++     + G  +L+ +G Y  +     +E  + +  + + 
Sbjct: 71  AATTLWQLPFAIALLASGVVALLVSAVFGYVTLRVKGPYFLLIGFAFTEALRILYTRSEW 130

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +  G +G+        LG    +                     ++ +  +   ++ W+ 
Sbjct: 131 L-GGNSGMVGIFPPALLGDCFPT--------------------FVVAVAGVLILLLAWIE 169

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            + +   +  IRDN     S+   +   K+  F ++S   GMAGA  A S + ISP  F 
Sbjct: 170 HSHVGRVFVAIRDNDNVVRSVGIPVHAMKVLCFCIASFVTGMAGALQAFSNNVISPLDFG 229

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F  +   ++ + +GG                       +       L      F      
Sbjct: 230 FMLSTFALAYLKVGGERHALGP---------------VVGAVLLVLLASVAQRFGGGEQI 274

Query: 323 LMVIALFLVILMRSHSLLR--LRTPSNFLE 350
               A+   +L     +     R  +  ++
Sbjct: 275 FYGAAIVFGVLFMPDGVTGWLARRRTVRVK 304


>gi|288959301|ref|YP_003449642.1| inner-membrane translocator [Azospirillum sp. B510]
 gi|288911609|dbj|BAI73098.1| inner-membrane translocator [Azospirillum sp. B510]
          Length = 291

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 86/307 (28%), Gaps = 27/307 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ S      IY +   G SI+  +  +++        IG  +   L +        ++
Sbjct: 7   QYLLSGLTIGAIYALAGLGFSIIYNASHVINFAQGEFIMIGGMASATLTASGVPLPLAIL 66

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                      ++      + R        +I       +    + +             
Sbjct: 67  IGCGGAMLVGVLVAKFAVERARDASTVTLIIITIGASIFLRGVAELVWG----------- 115

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + +              +    +V+     L  +I L+  +T    A      N
Sbjct: 116 -KDFKRLDAFSGETPIQFLGASMQPQSLWVVGTAGVLIVAIGLFFAKTLTGKAILATSHN 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +    L++FA+S+A   + GA  A      S         +   +  +LG
Sbjct: 175 RLAAQLVGIDVKRVVLASFALSAALGAVGGAVVAP--ITFSYTEMGIMLGLKGFTAAVLG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+           I+     L  G     +   + F             + +  V+L   
Sbjct: 233 GLGHGPGAVAGGLIVGVAEALGAGYISSAYKDAVAF-------------VIILAVLLFMP 279

Query: 337 HSLLRLR 343
           + L   R
Sbjct: 280 NGLFGKR 286


>gi|254475686|ref|ZP_05089072.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria sp. R11]
 gi|214029929|gb|EEB70764.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria sp. R11]
          Length = 343

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 42/336 (12%), Positives = 111/336 (33%), Gaps = 17/336 (5%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           RL  Y   L + A+     L +   A+     +  + + ++I+ + A GL++V G + ++
Sbjct: 19  RLAPYAPFLLVPALAVAGFLAVQNPASWLTLTVSGLAMGMMIF-IMASGLTLVFGLMDVI 77

Query: 67  SLNCVIAYAIGAYS-YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           +       ++GA+    +L +   ++    + ++ +   A  +     +      +  + 
Sbjct: 78  NFGHGAFVSVGAFVGISVLLALGQMTGAPSLGLNLLAVLAAVLAAMAATATMGWAFERVI 137

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
              +     + ++           + +           R               E +   
Sbjct: 138 VKPVYGNHLSQILVTMGGLIIAEQLIIVLWGPEEIYFTRPETLKGALTFGDAAIEKYRLV 197

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            +     + A++   LRRT I    R    N +   +L   +    +  F   SA  G+ 
Sbjct: 198 AVGVGLVVFAAMRFVLRRTKIGLIVRAGVQNGEMVAALGYRLRLVFVGVFIAGSALAGLG 257

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  +   ++ I+  M      I++  +VI+GG+ S+        ++  +      +    
Sbjct: 258 GVMWGLYQEVITAHM-GNQAMILIFIVVIIGGLGSVEGCFVGALLVGLLQNYIAFVE--- 313

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                              +  +  +++ R   ++ 
Sbjct: 314 -----------PKLALISNIALMVAILMWRPMGMIP 338


>gi|159044066|ref|YP_001532860.1| hypothetical protein Dshi_1517 [Dinoroseobacter shibae DFL 12]
 gi|157911826|gb|ABV93259.1| hypothetical protein Dshi_1517 [Dinoroseobacter shibae DFL 12]
          Length = 434

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 60/345 (17%), Positives = 113/345 (32%), Gaps = 22/345 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           VV  L   L + A     Y      ++    +    L+       L         A+   
Sbjct: 91  VVLALFWGLIVLAGSILLYQRMAPGRMRTLALIVVLLAGFFSYRALFDPAVAAIEAVNP- 149

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +        GL + L  P+   ++GA   ++G  +L  R DYLAIATL ++EI   ++  
Sbjct: 150 AGTGYLGGLGLPVLLAWPIGGALAGAAAWVVGKAALGLRSDYLAIATLGIAEIVIAVMKN 209

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              ++ G   +    R       +++   F    +S+    +    +++ + +      +
Sbjct: 210 EDWLSRGVKNVVSIPRPVPYEIDLQNDPDFVARMTSWGYDPVVASSIVVKLAYAGLFAAV 269

Query: 200 WLR---------RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
            L          R+      R IRDN+ A  ++   +    L  F + SA  G+AGA   
Sbjct: 270 LLALLWLLEMALRSPWGRMMRAIRDNETAAEAMGKDVKKRHLQIFVMGSAICGVAGAMLV 329

Query: 251 AS-RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                 I           ++  +VI+GG  +         ++  +      M       +
Sbjct: 330 TMESQLIPSSYQPLRFTFLIWVMVIVGGSGNNWGAILGGFLIWFLWIQVEPMGQQLMALI 389

Query: 310 LKFDCSFNMR-----------HTTLMVIALFLVILMRSHSLLRLR 343
                  +                 M I L LV+      L+  +
Sbjct: 390 TAGMEDGSALKEHLIESAAHMRLLTMGIVLLLVLRFSPRGLIPEK 434



 Score = 39.9 bits (91), Expect = 0.67,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 37/92 (40%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L       LL +  G  +S     ++    LI  + A G+++  G  GL ++  +   A+
Sbjct: 8   LGLFGIVALLIVATGVIQSWNVALTILNYGLISAVMALGVNMQWGYAGLFNVGIMGFAAL 67

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           G  + V++        W    +  +++   G+
Sbjct: 68  GGLAVVLVSMPPVGEAWSAGGLRVVLALFWGL 99


>gi|332283961|ref|YP_004415872.1| putative ABC transport protein, inner membrane component
           [Pusillimonas sp. T7-7]
 gi|330427914|gb|AEC19248.1| putative ABC transport protein, inner membrane component
           [Pusillimonas sp. T7-7]
          Length = 310

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 96/305 (31%), Gaps = 7/305 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +GL++        +GA     L + +  +       
Sbjct: 8   LINGITVGSVYALVALGYTMVYGIIGLINFAHGDVVMVGAMVATTLVAAFLGADP-GSTS 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +      ++     +         A   +    +   +      +             
Sbjct: 67  AWLAVTGALLLAIPLCMALGWIAERFAYRPLRRAPRLAALITAIGVSIIIQNVAMMVWGR 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +   +I    F        +    ++L    + A ++L + RT +  A R    N++
Sbjct: 127 NYLSFPHIIEPNIFQLGGARISLLQIIIILSATAIMAGLLLVVHRTRLGTAMRATAQNRE 186

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   I     +AF + SA   +AG         ++     F   +   +  +LGG+
Sbjct: 187 VAGLMGVNINTVISAAFLIGSALAAVAGVMVTTYYG-VAQYTMGFMLGLKAFTAAVLGGI 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L  +  L  G      N +       +        I L LV++ R   
Sbjct: 246 GNLGGAMLGGLLLGIIESLGAGYIGDLTNGVFG-----SNYQDVFSFIVLILVLVFRPSG 300

Query: 339 LLRLR 343
           LL  R
Sbjct: 301 LLGER 305


>gi|223938438|ref|ZP_03630331.1| inner-membrane translocator [bacterium Ellin514]
 gi|223892857|gb|EEF59325.1| inner-membrane translocator [bacterium Ellin514]
          Length = 296

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 93/293 (31%), Gaps = 16/293 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS----IWL 94
           + +      IY + A G ++V G L  ++      + +GA++   +  R          L
Sbjct: 8   LINGLSLGAIYGLIALGYTMVYGVLRFINFAHSDVFMVGAFAGYYISKRLPHESLGGGLL 67

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
           ++  + +I    G+I+   + +   +   +  LI +     +L        G        
Sbjct: 68  VLAAAMVICALLGIIIERLAYRPLRNRSKLNVLITAIGVSLLLENAGQFFFGAN------ 121

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
              F      + I       S     +F+  ++L +      +     +T I  A R + 
Sbjct: 122 PKPFPSLFPVTSINLCGLILSSNQIAVFIVTIVLLVTLQFIVL-----KTKIGTAMRAVS 176

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
            N  A   +           F + SA     G  ++ +   I P M      +      +
Sbjct: 177 FNPLAASLVGINNDVVISFTFGLGSALAAAGGILYSLNYQAIDPLM-GILPGLKAFVAAV 235

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           LGG+ ++   A    +L  +     G  F  +   + F     +       + 
Sbjct: 236 LGGIGNIPGAALGGLLLGVIETFVNGSRFSTYTDAIAFALLILILLFRPAGLL 288


>gi|163854850|ref|YP_001629148.1| branched chain amino acid ABC transporter permease [Bordetella
           petrii DSM 12804]
 gi|163258578|emb|CAP40877.1| probable branched-chain amino acid transport system, permease
           component [Bordetella petrii]
          Length = 304

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 96/308 (31%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL++V G + +++L     Y  GAY       R           
Sbjct: 8   LLNGLQFGLMLFLIAAGLTLVFGIMDIMNLAHGSLYMAGAYVAAETMQRT---------- 57

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            + ++      +    +    + + +  L + +    +L  +  I      + +      
Sbjct: 58  GSFVAAVLVAALATGLVGVVLELVLVRRLAVRDHLAQVLGTYAIILIANDLVKMIWGPAP 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + + +         ++Y  +   ++      +  +  ++ RT      R    N++
Sbjct: 118 VMLNLPAALSGPVRLLPDLMYPAYRLVIIACGLAAAVGLYWFVTRTRAGVLVRAGASNRQ 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L  FA+ +    +AGA                   I+V+  +++GG+
Sbjct: 178 MATLMGVRVPLLFLGVFALGAMLAAVAGALLGP--ITAVQIGMGEEILILVLVCIVIGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC---SFNMRHTTLMVIALFLVILMR 335
            S+        ++  V              +L                + + +  V++ R
Sbjct: 236 GSIRGAFVGALLVGMVDTAGRAFLPMLLREVLPPAMASSLAATLAAISIYLLMAGVLVFR 295

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 296 PAGLFPAR 303


>gi|146633|gb|AAA83884.1| leucine-specific binding protein [Escherichia coli str. K-12
           substr. W3110]
          Length = 308

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 96/312 (30%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+  +        IL     L        +  ++ F                 L
Sbjct: 244 TAAVLGGIGGIPGAMIGGLILGIAEALSSAYLSTEYKDVVSFALP-------------IL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|311696548|gb|ADP99421.1| urea ABC transporter, permease protein UrtB [marine bacterium HP15]
          Length = 308

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 95/301 (31%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                ++V+ A GL+I+ G +G++++       +GAY+  +    +   +  L      +
Sbjct: 22  LSLFSVFVLMALGLAIIFGQMGVINMAHGEFMILGAYTTYLTSGFFQSYLPSLFGGYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++      F      +   +       +L  W      +           +G  
Sbjct: 82  AMVLAFLICAALGAFVEW--LMIRRLYHRPLDTLLATWGLSLIMQQAYRSIFGAREVGVD 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +      +  V   I   +V++    ++  +   + R+      R +  N+    +
Sbjct: 140 LPEWMMGAIQVTDLVELPINGLFVMIIALSIAVGVYFLMYRSGYGKKVRAVVQNRPMAEA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +         + FA+     G+AGA F       +      +  +    +V+ GG  SL 
Sbjct: 200 VGINSAGIDRATFALGCGIAGVAGAAFTMIGS--TGPSSGQAYIVDTFLVVVFGGAQSLI 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++ +  ++++R   L+ L
Sbjct: 258 GTIVSAFGISQAQSTMEFFLSGSMAK-------------VLTLLVVVGILMLRPEGLMAL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|310778133|ref|YP_003966466.1| ribose ABC transporter membrane protein [Ilyobacter polytropus DSM
           2926]
 gi|309747456|gb|ADO82118.1| ribose ABC transporter membrane protein [Ilyobacter polytropus DSM
           2926]
          Length = 322

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 96/312 (30%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +++ +L+        S   + ++  Q  I  + + G++ V+   G + L+     A
Sbjct: 23  FIGLLIFAVLVSFMNPRFLSASNMLNVLRQTSINAIISAGMTFVI-LTGGIDLSVGSILA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                   L +    +  L I VS +I G  GM+ G+     +        + M+     
Sbjct: 82  FCGAISASLMASGQNAF-LAIAVSLVIGGILGMLSGMFISYGKLQAFITTLVTMT----- 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G   ++   +   +G    + +       + +     +Y + +       
Sbjct: 136 -------LMRGATLVFTDGKPISIGFGDNTSLFGSIGAGNILGIPTPIYIMAVVYGVSYY 188

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +      T        +  N++A       +   K   +A+S     +AG    A    
Sbjct: 189 VL----NHTKFGRYVYAVGGNEEATKLSGINVDKVKTKVYAISGVLSALAGIVVTARLFS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG+  ++       I+  +      +N   +  L+
Sbjct: 245 AQPTAGSGYELDAIAAVVLGGTSLAGGIGRITGTITGALIIGVLGNALNLLNVSSYYQLM 304

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 305 IKALVILAAVLM 316


>gi|158520851|ref|YP_001528721.1| inner-membrane translocator [Desulfococcus oleovorans Hxd3]
 gi|158509677|gb|ABW66644.1| inner-membrane translocator [Desulfococcus oleovorans Hxd3]
          Length = 300

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 96/320 (30%), Gaps = 26/320 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
             +   +++     +  IY M A G +I+  S G+++        +G    V L     L
Sbjct: 6   PFSDFLQFLFMGVQRGCIYAMVAMGFNIIYNSTGIINFAQGEFVVLGGLMMVTLTMASHL 65

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + +   ++A+   A G++M   ++    +   +  +I++     ++     +  G    
Sbjct: 66  PMPVAFLLTAVFVMAVGVLMERTTINPVKNPSVLRLIIITIAVSILIRGIAMLVWG---- 121

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                       +R                    +++  +       + +   T    + 
Sbjct: 122 -------KESHHMRHFSSEESINVLGATILPQTLWIIGMLVVTVGVFVYFFNYTMTGKSM 174

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R    N+ A            + +FA+S+    +AG                    +   
Sbjct: 175 RACAINRDAARLAGINDRKMIMLSFALSAGIGAIAGIIITPVIQM--DYARGALLGLKGF 232

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
              ++GG+ +      A  +L  +  +  G    ++                     L +
Sbjct: 233 GAAVVGGLGNSFGAVAAGLLLGIIEAMAAGYISSHYMDAAAL-------------FILLI 279

Query: 331 VILMRSHSLLRLRTPSNFLE 350
           V+ +R   L   R  + F E
Sbjct: 280 VLFVRPSGLFGNREAARFKE 299


>gi|84687109|ref|ZP_01014991.1| probable amino-acid transmembrane lipoprotein abc transporter
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84664880|gb|EAQ11362.1| probable amino-acid transmembrane lipoprotein abc transporter
           [Rhodobacterales bacterium HTCC2654]
          Length = 296

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 86/288 (29%), Gaps = 10/288 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y +F+ G +++ G   LL+      +  GA+            +  +   
Sbjct: 6   ILNGLVSGSVYALFSLGFTLIFGVQKLLNFAHGATFMAGAFIAYYCTISGLPFLLAIGFS 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                    +I  +     R                  L+    +      I        
Sbjct: 66  MLATGLIAILIDLIAFRTLRNR---------GNAEFPALVSSIGVDLILVSIAQQVSKTQ 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +            +    +   +    +L  +  L A++I +LR+T      R +  N++
Sbjct: 117 VLNFPFGTFPIKFYDLFGLRISLLQIVILAVVAVLVAALIFYLRKTTFGRQVRAVATNER 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L        L  F ++ A  G+AG       + I   M      +    +V++GG+
Sbjct: 177 AAALLGVNAQSVYLQTFFIAGALAGLAGVLIGLLFNSIQFLM-GEPYMLRAFVVVVIGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            S+     A+ +L     L            + F   F +       +
Sbjct: 236 GSVQGAIVASLLLGVTQSLAVAYLPSGLTDAIIFGLLFLVLLVRPNGL 283


>gi|293604328|ref|ZP_06686735.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292817205|gb|EFF76279.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 646

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/320 (13%), Positives = 105/320 (32%), Gaps = 26/320 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
            P+     + +T     +    I    Y + + GL+++ G L +++      Y  GA+  
Sbjct: 20  IPVFEIFGVPSTALFGQLLLGLINGSFYALLSIGLAVIFGLLNIINFAHGAQYTAGAFLA 79

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +L +  G++ W  + +  +I     +++    +        +  L+++     ++    
Sbjct: 80  WMLLNYLGVNYWAALVLVPLIMAVFAVVVERLLISRTYRMDHLYGLLLTFGIALLIEGGL 139

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               G +G+                         F+    +  + +     L  ++ + +
Sbjct: 140 RQAYGVSGLPYTIP----------KALSGGVNLGFMFLPWYRGWAVAVSLVLCLAVWVLI 189

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            +T +    R   +N     S    +       +A+  A   +AG   A         M 
Sbjct: 190 EKTRVGAMLRAATENPTIVRSFGINVPLLITLTYALGVALASVAGVIAAPIYQV--SPMM 247

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             +  ++V ++V++GGM S+     +   L  +  L                  +     
Sbjct: 248 GSNLVVVVFAVVVIGGMGSIMGAILSGFGLGIIEGLTKVF--------------YPEAAN 293

Query: 322 TLMVIALFLVILMRSHSLLR 341
             + I + LV+L +   L  
Sbjct: 294 LAIFIIMVLVLLCKPAGLFG 313



 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 58/302 (19%), Positives = 118/302 (39%), Gaps = 29/302 (9%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +  +++L + +FA   +++VG +GLLS      +   AY+  I+    G +  L +    
Sbjct: 359 TFLMKVLCFALFAAAFNLLVGYVGLLSFGHAAFFGAAAYATGIVMKVLGATPELGLLAGV 418

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +  G  G+  G  +++ +G Y A+ TL +S++   I ++    T G+ G+    R     
Sbjct: 419 VTGGLLGLAFGAIAIRRQGIYFAMITLALSQLVYFIAVQA-GFTGGEDGLQSVPR----- 472

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                      F    +   + MYY  L +  L  + +L +  +      R++RDN++  
Sbjct: 473 --------GKLFGIFDLQNVMPMYYFTLAVFALGYAFVLRVLNSPFGEVIRSVRDNEQRA 524

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            SL  +    KL AF +S++  G+AG          S     +  N  V+ + +LGG+ +
Sbjct: 525 RSLGYSTSRYKLLAFTLSASVAGLAGGLKVLVFGVASLTDVHWHANGEVVLMALLGGIGT 584

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +          + +      +                     +      L +L+    ++
Sbjct: 585 VFGPLAGAFTFVSLQNYLAPL---------------GSWVLIVQGAIFVLCVLLLRDGIM 629

Query: 341 RL 342
            L
Sbjct: 630 GL 631


>gi|255262320|ref|ZP_05341662.1| branched-chain amino acid ABC transporter, permease protein
           [Thalassiobium sp. R2A62]
 gi|255104655|gb|EET47329.1| branched-chain amino acid ABC transporter, permease protein
           [Thalassiobium sp. R2A62]
          Length = 326

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 57/338 (16%), Positives = 132/338 (39%), Gaps = 20/338 (5%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           L  +K   +  +  +    +    L A   +         + +  + + G+ +    +G 
Sbjct: 2   LNFSKTQIMGVVAFLAIFFVGVPVLIAATGRWDFYFTLTSVALLAIASAGVWLTF-YIGR 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           +++       +GAY   IL  + G S WL +P + + +    +++GLP L+ RG Y A+ 
Sbjct: 61  INIGQGAFALVGAYVSAILVVKTGWSFWLSLPAAGLFAALVAVLIGLPILRLRGVYFAMI 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL+++++     +        K    +         ++  +  F    ++ +      Y+
Sbjct: 121 TLVLTQVATLTALALPITNGAKGITSIPLPGAISIFSMPLVPDFSTLENARMA----FYF 176

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
             + +  ++ + +  L  + + +  R+++ N++   S+   I + ++  FA+SS F G+ 
Sbjct: 177 TAIILMIITYAALYRLVNSRLGHLCRSMQQNEELASSIGVNITYIRILIFAISSFFGGIG 236

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA F +    + P  F   +++  +    LGG+  +      T  L    +L        
Sbjct: 237 GAMFGSISQSVYPATFVVKDSVDFMLNCFLGGLGYVFGPMLGTLALYFGWDLL------- 289

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                     F      +    L ++I    + LL +R
Sbjct: 290 --------FEFGKYQMLIYATLLIIIIRFLPNGLLSIR 319


>gi|227883601|ref|ZP_04001406.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli 83972]
 gi|227839480|gb|EEJ49946.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli 83972]
 gi|307555551|gb|ADN48326.1| high-affinity branched-chain amino acid transport system permease
           protein LivH [Escherichia coli ABU 83972]
          Length = 308

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 97/312 (31%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMLGIDTGWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
               ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 CACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ S+        IL     L        +  ++ F               L L
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSF-------------ALLIL 290

Query: 331 VILMRSHSLLRL 342
           V+L+    +L  
Sbjct: 291 VLLVMPTGILGR 302


>gi|224372150|ref|YP_002606522.1| abc transport system permease protein [Nautilia profundicola AmH]
 gi|223588421|gb|ACM92157.1| abc transport system permease protein [Nautilia profundicola AmH]
          Length = 304

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 90/303 (29%), Gaps = 16/303 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A G ++V G L L++        +GA+   I     GL+ ++ +  
Sbjct: 10  IVNGFSLGSMYALIAIGYTLVYGVLRLINFAHGDIMMVGAFMAFIFFKIIGLNFYVSVLF 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G++    + K   D  A    ++                             
Sbjct: 70  AIIFTAGVGILTYASAYKPLLDKDAPKISLLITAIGISFFLESLFNVIANQYLG----GT 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +   +    V +    L   ++  L RT I  A R +  + +
Sbjct: 126 YQAFYFPKWFSHILHVGSLTVPVLTVLVPILTLALLGIVLFILYRTKIGIAIRALAFDIQ 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           FA+ SA   + G  +A +   I P M      +   +  ++GG+
Sbjct: 186 TVKLMGADSNKIIAFVFALGSALAAIGGIAYAMAYPSIDPYM-GMLVGLKAFAAAVVGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++       IL        G           F             I L  V+L +   
Sbjct: 245 GSVTGAVIGGFILGFAEVAIPGFFPELGGWKDAFA-----------FIFLIFVLLFKPTG 293

Query: 339 LLR 341
           ++ 
Sbjct: 294 IMG 296


>gi|302877547|ref|YP_003846111.1| inner-membrane translocator [Gallionella capsiferriformans ES-2]
 gi|302580336|gb|ADL54347.1| inner-membrane translocator [Gallionella capsiferriformans ES-2]
          Length = 307

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 94/305 (30%), Gaps = 10/305 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +Q  +Y + A G ++V G LGL++        +GA   +   +         +  
Sbjct: 8   IINGLVQGSVYALVALGYTMVYGILGLINFAHGEVVMVGAMLALSALTALIGWGVPPLLA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +          L                         I    +    A +      + 
Sbjct: 68  LPVSLLLAMAGCMLLGFGIERIAYRPLRHAPRLAPLITAIGVSIVLQNLAMMIWGREYHA 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +            I  I +    + M    A ++L + RT++  A R + +NQ 
Sbjct: 128 FPQLINNQSHHVGGAIINDIQIIIIIMAFVIM----AGLMLIVHRTSLGRAMRAVAENQH 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       F + SA   +AG    ++   ++     F   +   +  +LGG+
Sbjct: 184 AAQLMGVDVNRVISVTFMLGSALAAIAG-LMVSANYGLAHYYMGFLLGLKAFTAAVLGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L       A+L G++          +   L      +          L  V++ R   
Sbjct: 243 GNLR-----GAMLGGLLLGLIESLGAGYIGDLTGGFLGSQYQDVFAFFVLIAVLVFRPSG 297

Query: 339 LLRLR 343
           LL  R
Sbjct: 298 LLGER 302


>gi|146283530|ref|YP_001173683.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas stutzeri A1501]
 gi|145571735|gb|ABP80841.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas stutzeri A1501]
          Length = 295

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/316 (15%), Positives = 106/316 (33%), Gaps = 26/316 (8%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L   +  +     +    I    Y + + GL+I+ G L +++      Y +GA+   +  
Sbjct: 3   LVFGVPLSVLLGQLLLGLINGAFYALLSLGLAIIFGLLRIINFAHGAQYMLGAFVAFLGL 62

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           +  G+S W  + ++ ++ G  GM +    L+       +  L+++     I+        
Sbjct: 63  NYLGVSYWFALVLAPLVVGCLGMAIERGLLRRIAGEDHLYGLLLTFGLALIVEGSFVKLF 122

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G +G                 +    F   F+   I+  +V++    +  +    + RT 
Sbjct: 123 GVSGSSYPMP----------ELLRGGFNLGFMFLPIYRAWVIVAALVVCLATWYVIERTR 172

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           + +  R   +N K        +       +    A    AG   A             + 
Sbjct: 173 LGSYLRAGTENPKLMQGFGINVPLLVTLTYGYGVALAAFAGVLAAP--IYAVTPGMGSNL 230

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
            I+V ++V++GGM S+         +  +  L                  +     T++ 
Sbjct: 231 LIVVFAVVVIGGMGSILGAIITGIAMGLIEGLTKVF--------------YPEAANTVVF 276

Query: 326 IALFLVILMRSHSLLR 341
           + +  V+L+R   L  
Sbjct: 277 LVMVAVLLIRPAGLFG 292


>gi|293607543|ref|ZP_06689877.1| urea ABC superfamily ATP binding cassette transporter, membrane
           protein [Achromobacter piechaudii ATCC 43553]
 gi|292813976|gb|EFF73123.1| urea ABC superfamily ATP binding cassette transporter, membrane
           protein [Achromobacter piechaudii ATCC 43553]
          Length = 330

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 103/307 (33%), Gaps = 18/307 (5%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             +        L+  + A  L+ V G  G+L       + +GAY++ I    +G      
Sbjct: 26  DMFSLLSMTVYLVMALLALSLAFVWGHGGILCFGQAAFFGLGAYAWAIGAFNFGP----G 81

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +   A+          L         ++   L +  +   +++     +       + + 
Sbjct: 82  MGAMALAIAVPAAFAALLGYFMFYGKISDVYLGVITLAVTLILFNLMNSTSGDSYRIGEA 141

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           L      + S+       ++  +     + +   +   +   +  +  +        +R+
Sbjct: 142 LLGGFNGIPSIPPLTLPGAAEPLSPEGTFTLAALILIAAYFGLRAVMVSRFGRVVAAVRE 201

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N++    L       KL+AF +  A  G+AG  +A     +SP +F  S++  +I  VI+
Sbjct: 202 NEQRALLLGYNASLYKLAAFTLGGALAGLAGMLYANWGAFVSPGVFGLSQSAQIIIWVIV 261

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  +L     A   L  +V      +                    ++ ++L L +L+ 
Sbjct: 262 GGRGTLIGPIIACVALQAMVTQLGAQHTVDTG--------------LVLGVSLILFVLLI 307

Query: 336 SHSLLRL 342
              L   
Sbjct: 308 PRGLAPT 314


>gi|322419574|ref|YP_004198797.1| inner-membrane translocator [Geobacter sp. M18]
 gi|320125961|gb|ADW13521.1| inner-membrane translocator [Geobacter sp. M18]
          Length = 294

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 88/290 (30%), Gaps = 13/290 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ S      IY +     +I+  S G+++        +G    +   +   L +   I
Sbjct: 9   QFVISGLATGAIYALIGLSFAIIFNSTGIINFAQGEFVMLGGVLTIFSLNVLQLPLPAAI 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + +++   G+     +++   +   +A +I++     ++     +  GK         
Sbjct: 69  VTAVVVTTIIGIAFERLAIRPLKNATPLALIIITIGASILIRGMVMLLWGKD-------- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + +                   ++      +     L+   T    A R    N
Sbjct: 121 ---TQALPAFSGTDPISVVGATLLPQHLWIFGVTVLVIVGCRLFFHHTISGKAMRACSFN 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   +  ++    L +F +S+A   +AG   A                +      I+G
Sbjct: 178 PRAANLVGISVGRMVLFSFVISAAVGSLAGVIIAPLTMTA--YDVGVMLGLKGFCAAIMG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           GM S         IL  +  L  G+    +   + F     +       +
Sbjct: 236 GMGSGLGTVLGGLILGTLESLGAGLISSGYKDAIAFFILLLILFIRPQGL 285


>gi|254461078|ref|ZP_05074494.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2083]
 gi|206677667|gb|EDZ42154.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 326

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 56/336 (16%), Positives = 128/336 (38%), Gaps = 20/336 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
                 +   + +    +    +     +         + +  + + G+ +    +G ++
Sbjct: 4   FTSKQLVGVGIFLFMIFIGVPLIIGATGRWDFYFTLTSVALLAIASAGVWLTF-YIGRIN 62

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           +       IGAY   IL  + G S W+ +P + + +    +++GLP L+ RG Y A+ TL
Sbjct: 63  IGQGAFALIGAYVSAILVVKAGWSFWISLPAAGLFAAIVAILIGLPILRLRGVYFAMITL 122

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           +++++     +        K    +          +  L  F          ++  YY  
Sbjct: 123 VLTQVVTLTALALPITNGAKGISNIPLPSSISVFGIPILPDFAAME----NTKLAFYYTA 178

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  L+ + +  L  + + +  R+++ N++   S+   I + ++  FA+SS F G+ GA
Sbjct: 179 CIIMILTYAALYRLVNSRLGHLCRSMQQNEELASSIGVNISYIRVVIFAISSFFGGLGGA 238

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            F +    + P  F+ ++++  +    LGG+  +      T +L    +L          
Sbjct: 239 MFGSIAQSVYPSSFQVADSVNFMLNCFLGGLGFVFGPMLGTLVLYFGWDLL--------- 289

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                   F      +    L ++I    + LL +R
Sbjct: 290 ------FEFGKYQMLIYSTVLIIIIRFLPNGLLSIR 319


>gi|312879765|ref|ZP_07739565.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Aminomonas paucivorans DSM 12260]
 gi|310783056|gb|EFQ23454.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Aminomonas paucivorans DSM 12260]
          Length = 297

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 96/305 (31%), Gaps = 22/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      +Y + A G ++V G L L++      + +GAY      + Y L   + + +
Sbjct: 10  FFNALTLGSLYGLIAIGYTMVYGILRLINFAHGDIFMLGAYGVFWALTLYSLPWSVAVVL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +++   G+++   + +       I+ LI +      +     +           R   
Sbjct: 70  SVVLTAGLGILVDRIAYRPLRSAPRISALISAIGVSFFIENLCIVV-----FSGIPRPVE 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +++ F       +   +    ++L      A +   + RT    A R I  + +
Sbjct: 125 RPEWLVNVLEFGNIRILPLALVVPAISLVLV-----AGLFWVVYRTKPGLAMRAISKDIE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +  ++       F + SA    AG  +A    +I P M             +LGG+
Sbjct: 180 TTRLMGVSVDHIIALTFGLGSALAAAAGIMWALRYPQIHPLM-GIFPGFKAFIAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L  +  +              F     +    L           +   
Sbjct: 239 GSIQGAMIGGLLLGFIEIMVVAFFPALSGYRDAFAFVLLIVILLL-----------KPTG 287

Query: 339 LLRLR 343
           L+  +
Sbjct: 288 LMGEK 292


>gi|86747269|ref|YP_483765.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86570297|gb|ABD04854.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 288

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 93/305 (30%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y   A G S+V G L +++L       +GAY    L     LS W  I V
Sbjct: 7   LINALVLGSLYACIAIGFSLVWGVLNVINLIHGSFIVLGAYLAFGLYQSLHLSPWYAIVV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A +    G I+    L        + TL ++     IL              +      
Sbjct: 67  AAPVFFVFGYIVQRLILNRVITAPVLVTLTLTFGLDLILNNA-----------MIYVFTA 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +  +          V+  +           L+  + L LRR+ +  A   +R ++ 
Sbjct: 116 DYRRLTLIPPLGSVSFEGVVVPVDRLIATATALALTGLLYLLLRRSRVGRAIVAVRLDRD 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +      AF + +A  G AG   A            +        + +LGG+
Sbjct: 176 AAVLMGVHVPSIYAVAFGLGAALAGCAGVLMALIFPISPLTSSAYLG--KAFVVCVLGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+S       +L  V  +          + L F                      R   
Sbjct: 234 GSVSGALAGGMLLALVESVGSAFFGPAHATTLSFLLLIIFLIL-------------RPQG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGRK 285


>gi|217969003|ref|YP_002354237.1| inner-membrane translocator [Thauera sp. MZ1T]
 gi|217506330|gb|ACK53341.1| inner-membrane translocator [Thauera sp. MZ1T]
          Length = 304

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 89/305 (29%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      + + A+  V   +    +    IP+
Sbjct: 8   LINGLTLGAMYGLIAIGYTMVYGIIGMINFAHGDIFMVSAFIAVTAFTILAAADVTSIPL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
           +        +                     + +   I  I           +    R+ 
Sbjct: 68  ALTFVLIVSIFFTSAYGWAVERTAYRPLRGSTRLAPLISAIGMSIFLQNSVQLTQGARVK 127

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   +   I  +  P   V        +++    L ++    + +T      R    ++
Sbjct: 128 PIPPVLEGGIVLWDAPGFTVQIGWSQMLIIVTTVILMSAFTWMITQTPFGRQQRACEQDR 187

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                L   +       F + +A   +AG         +      F   I   +  +LGG
Sbjct: 188 TMAALLGVNVDRTISYTFMLGAALAAVAGVMVTVYYGVVDFF-IGFLAGIKAFTAAVLGG 246

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + SL        ++  +        +  +  +  F               L LV+++R  
Sbjct: 247 IGSLPGAMLGGLLIGLIESFWAAYLWAEYKDVATFG-------------ILCLVLMLRPS 293

Query: 338 SLLRL 342
            LL  
Sbjct: 294 GLLGR 298


>gi|254504934|ref|ZP_05117085.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222441005|gb|EEE47684.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 360

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 87/303 (28%), Gaps = 18/303 (5%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
              L      S   +  +  Q+ I  + A   SIV+ + G + L+      + +      
Sbjct: 62  FGLLLGSKFFSPFAMTLILQQVQIVGIVAAAQSIVILTAG-IDLSVGAIMVLSSVVMGQF 120

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
             RYGL + + I    +    CG I G      +     +   +   +     +     T
Sbjct: 121 TFRYGLPVEVAIAAGLICGTICGYINGFLVAVVKLPPFIVTLGMWQIVLATNFLYSANET 180

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                I     L               F +   I      Y ++ M  L   +   LR+T
Sbjct: 181 IRSQDISEQAPLLQF------------FGNKVAIGGAIFTYGVIFMVLLVLVLAYVLRQT 228

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
           A       I D+ +A       +   ++S + +S      AG         +SP   + +
Sbjct: 229 AWGRHVYAIGDDPEAAQLSGVKVKRVQISVYMLSGLICAFAGWAMIGRIGSVSPTTGQLA 288

Query: 265 ENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
               + ++VI      GG  S+        I+         +      + L         
Sbjct: 289 NIESITAVVIGGISLFGGRGSILGTLFGALIVGVFTLGLRLLGADAQWTYLLIGLLIIAA 348

Query: 320 HTT 322
              
Sbjct: 349 VAV 351


>gi|18314010|ref|NP_560677.1| branched-chain amino acid transport permease protein [Pyrobaculum
           aerophilum str. IM2]
 gi|18161586|gb|AAL64859.1| branched-chain amino acid transport permease protein [Pyrobaculum
           aerophilum str. IM2]
          Length = 363

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 57/331 (17%), Positives = 107/331 (32%), Gaps = 34/331 (10%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           I + IY ++   L++ VG +GL     V+  A+GA +   + ++  L I+  +  S +  
Sbjct: 19  IIVAIYGIYVLSLNLEVGYMGLPQFGKVMFLALGAIAVGGIATKVALLIYSHVISSQLNI 78

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT-----NGKAGIYVADRLYF 158
                +    S         I  +  +     +   +  IT      G  G+ +A     
Sbjct: 79  SPLSDLDTYCSAYQYSAIGIINNIFSNSPLSGLAFFFMSITLAAILGGVFGVLMAGPALR 138

Query: 159 LGTT--------------------------VRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           L                             V   +    F       +     V L    
Sbjct: 139 LREDYLGILLLVSAETVRVISTYTPQVACGVFGAVIPDPFAWLREGRQWGYLAVTLIFLL 198

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           LS  I+  L  +    A R IRD + A       I+  ++   A +SA  G+AGA  A  
Sbjct: 199 LSFVILERLGNSPFGRALRAIRDAEVAARVFGKDIVKFRVRVLATASALAGVAGALLAFY 258

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
            + +    F   E     +++I+GG  +         +   +      ++ Y        
Sbjct: 259 NNFVLMGQFVPLETFKGWAMLIIGGTGNNIGALLGVVVYYVID---RVLSLYKEGIRQII 315

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
           +         +  I + LV++ R   ++  R
Sbjct: 316 NVDPIFFQYIIFGIIIILVLMFRPQGIISER 346


>gi|294651937|ref|ZP_06729226.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Acinetobacter
           haemolyticus ATCC 19194]
 gi|292822169|gb|EFF81083.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 544

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/291 (10%), Positives = 88/291 (30%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       IGAY+  ++ S +      L+    + +     ++       
Sbjct: 271 ITYGLLGVINMAHGELIMIGAYTTYVVQSFFKTHFVGLVDWYLLAAIPAAFLVSALIGML 330

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         + +      +  +  S +      +  +
Sbjct: 331 IER--TVIRPLYGRQLETLLATFGVSLILMQLVRMVFGAQNVEVSNVSWLSGGIALTPSL 388

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++     +   ++  L +T      R +  N++   ++        + AF +
Sbjct: 389 MLPYNRIAIIAFTIAVLLLLVFLLNKTRFGLFVRAVTQNRQMARAVGIRSARIDMMAFGL 448

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG   A   +        +  +  ++ +V                +      +
Sbjct: 449 GSGLAGLAGCALAQVGNVGPDLGQNYIIDAFLVVVVG--------------GVGQVWGAV 494

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
              +      ++L+      +    L+ + + L I  R   L  ++     
Sbjct: 495 LAALGLGISGTVLEIGMGAVLAKIILL-VLVILFIQKRPQGLFAIKGRFVE 544


>gi|159899199|ref|YP_001545446.1| inner-membrane translocator [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892238|gb|ABX05318.1| inner-membrane translocator [Herpetosiphon aurantiacus ATCC 23779]
          Length = 672

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 75/341 (21%), Positives = 126/341 (36%), Gaps = 34/341 (9%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R N    I+       PLL   F         I    IQILIY + A GL+++VG  G+
Sbjct: 341 VRQNWRWLIVPAFLACVPLLNAWFELG------IQVAAIQILIYGLLALGLNLIVGWGGM 394

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG---------ACGMIMGLPSLK 116
           L L     + +GAY   ++ +         +    +              G ++GL + +
Sbjct: 395 LDLGYAAPFVLGAYLVGLMSTGLHGGWQTWLASGELAGILLVCGIGGSLFGWLIGLLAAR 454

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
              + LAI T  +  I Q +L  W+ +TNG +GI     L                    
Sbjct: 455 LDNELLAIVTFALGVIAQRVLQNWRSLTNGSSGISGVPNLQIF--------------GLD 500

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
           +      YY +L +      +   L R+    A   +  ++ A  S+    +  K  A+A
Sbjct: 501 LATPSATYYAVLAITCGVGILGYNLVRSHYGRALAALASDELAAASVGVAPVALKRLAYA 560

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI-----L 291
                  +AG  FA S   ISP + +F  + I + IV+L G   +     AT +     L
Sbjct: 561 WGGGVAALAGGLFAVSFSYISPTLAEFRVSAIALIIVVLAGSRRIIAPLIATCLVLGYDL 620

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           + + +L    +     +      + N R    +   L L +
Sbjct: 621 LLIPKLGKLFDDLREQTGNWLWSAINPRGANFLSFGLMLYL 661


>gi|126668821|ref|ZP_01739767.1| Branched-chain amino acid ABC-type transport system, permease
           component [Marinobacter sp. ELB17]
 gi|126626704|gb|EAZ97355.1| Branched-chain amino acid ABC-type transport system, permease
           component [Marinobacter sp. ELB17]
          Length = 289

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 93/301 (30%), Gaps = 26/301 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                I +M A GL+I+ G++G+++L       IGAY    L S++G+ I + +P+  + 
Sbjct: 12  LSLTSILLMVALGLAIIYGTMGVINLAHGQFVMIGAYVAWFLQSQFGIGIIVGLPLIFIA 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G+ +    ++          L    I   +    + +    +              
Sbjct: 72  GALLGLAVERTIIQRLYTRPLDTILATWGIGIVLEQLVRGLFGSDSRYVARPEFLDGNLI 131

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +  +               +  +++       A     L RT      R +  N++    
Sbjct: 132 LAGVHM-----------SYYRLFIIGFALLTLAVTWFLLFRTEFGTKLRAVIQNKEISEC 180

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
              +        FA  +    +AGA                   +    +VI+GG+ S+ 
Sbjct: 181 YGVSANRVYAVTFAYGAGLAAIAGALITPMVSV--TPTMGTGVVVDAFLVVIVGGVGSIV 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             A A  ++         +                     L+++ + ++I  R   L   
Sbjct: 239 GTAAAALMIGEATAWLSYLLSETTAR-------------ILILLGVIVLIRFRPQGLFPD 285

Query: 343 R 343
           +
Sbjct: 286 K 286


>gi|225628060|ref|ZP_03786096.1| ribose ABC transporter permease [Brucella ceti str. Cudo]
 gi|254708287|ref|ZP_05170115.1| hypothetical protein BpinM_15358 [Brucella pinnipedialis
           M163/99/10]
 gi|254710661|ref|ZP_05172472.1| hypothetical protein BpinB_10396 [Brucella pinnipedialis B2/94]
 gi|254714844|ref|ZP_05176655.1| hypothetical protein BcetM6_16193 [Brucella ceti M644/93/1]
 gi|254717901|ref|ZP_05179712.1| hypothetical protein BcetM_16141 [Brucella ceti M13/05/1]
 gi|256032155|ref|ZP_05445769.1| hypothetical protein BpinM2_16172 [Brucella pinnipedialis
           M292/94/1]
 gi|256160351|ref|ZP_05458044.1| hypothetical protein BcetM4_15195 [Brucella ceti M490/95/1]
 gi|256255556|ref|ZP_05461092.1| hypothetical protein BcetB_14979 [Brucella ceti B1/94]
 gi|260169287|ref|ZP_05756098.1| ribose ABC transporter, permease protein [Brucella sp. F5/99]
 gi|261219749|ref|ZP_05934030.1| monosaccharide-transporting ATPase [Brucella ceti M13/05/1]
 gi|261222762|ref|ZP_05937043.1| monosaccharide-transporting ATPase [Brucella ceti B1/94]
 gi|261315788|ref|ZP_05954985.1| monosaccharide-transporting ATPase [Brucella pinnipedialis
           M163/99/10]
 gi|261318233|ref|ZP_05957430.1| monosaccharide-transporting ATPase [Brucella pinnipedialis B2/94]
 gi|261322639|ref|ZP_05961836.1| monosaccharide-transporting ATPase [Brucella ceti M644/93/1]
 gi|261758800|ref|ZP_06002509.1| bacterial inner-membrane translocator [Brucella sp. F5/99]
 gi|265989264|ref|ZP_06101821.1| monosaccharide-transporting ATPase [Brucella pinnipedialis
           M292/94/1]
 gi|265998725|ref|ZP_06111282.1| monosaccharide-transporting ATPase [Brucella ceti M490/95/1]
 gi|225617223|gb|EEH14269.1| ribose ABC transporter permease [Brucella ceti str. Cudo]
 gi|260921346|gb|EEX87999.1| monosaccharide-transporting ATPase [Brucella ceti B1/94]
 gi|260924838|gb|EEX91406.1| monosaccharide-transporting ATPase [Brucella ceti M13/05/1]
 gi|261295329|gb|EEX98825.1| monosaccharide-transporting ATPase [Brucella ceti M644/93/1]
 gi|261297456|gb|EEY00953.1| monosaccharide-transporting ATPase [Brucella pinnipedialis B2/94]
 gi|261304814|gb|EEY08311.1| monosaccharide-transporting ATPase [Brucella pinnipedialis
           M163/99/10]
 gi|261738784|gb|EEY26780.1| bacterial inner-membrane translocator [Brucella sp. F5/99]
 gi|262553349|gb|EEZ09183.1| monosaccharide-transporting ATPase [Brucella ceti M490/95/1]
 gi|264661461|gb|EEZ31722.1| monosaccharide-transporting ATPase [Brucella pinnipedialis
           M292/94/1]
          Length = 334

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 94/314 (29%), Gaps = 20/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++   +L        +   I ++ +Q  I  + A G++ V+     + L+     
Sbjct: 27  IFIAFLLLATILSFSNEYFLTAGNISNVLLQTSINGILAIGMTFVI-LTRGIDLSVGSVV 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+         +   ++     P S  I+   G+++G+      G  ++   +       
Sbjct: 86  ALAGIVSASFATTSAMAGIAGAPYSPFIAICVGLLVGIGCGALVGTIVSRFAVPAFVATL 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +L   + +T    G      L      + +               + +   ++ +  + 
Sbjct: 146 GMLSAARGLTLIYGGGKPVPALVPDFRWIGT------------GNILGVPVPVILLAIVF 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L R+        +  N  A  +    I   + S + +S    G+AG   +A   
Sbjct: 194 LVSWWILNRSRFGRYIYAVGGNPHAANTSGINISRVRFSVYVISGGLAGLAGMILSARTG 253

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                    S  +  I+ V++      GG+  ++       I+  +      M    +  
Sbjct: 254 SA-LPQAGISYELDAIAAVVIGDTSLSGGIGRITGTLIGALIIGVMNNGLDLMGIQSYYQ 312

Query: 309 LLKFDCSFNMRHTT 322
            +            
Sbjct: 313 QVLKGALIVGAVML 326


>gi|326794844|ref|YP_004312664.1| ABC-type transporter integral membrane subunit [Marinomonas
           mediterranea MMB-1]
 gi|326545608|gb|ADZ90828.1| ABC-type transporter, integral membrane subunit [Marinomonas
           mediterranea MMB-1]
          Length = 287

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 92/303 (30%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL++V G +G+L+L     + +GAY       + G         
Sbjct: 10  LINGLQYGLLLFLIASGLTLVFGVMGILNLAHGSMFMVGAYLAWYFVQQTGSFAASAAIS 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +      ++      +          L+   +          +               
Sbjct: 70  AVIALLIGFVVERTLIRRLYKRNHLDQVLLTIGMIFVFNAMQGLLWG----------NDP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           LG  V   +      +  + Y ++  +V L    ++  +   + +T +    R    +++
Sbjct: 120 LGVDVPEALSASIPLTGIIEYPVYRIFVALFCVVVAVGMYYVINKTRLGMLIRAGESDRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   I       FA+      +AG   A     +          I    +V++GGM
Sbjct: 180 MVECLGIDINRLYTIVFAIGVMLSAVAGVVAAPISSIVPGMGEHIL--ITCFVVVVIGGM 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  V      +                   + ++ I +  ++L++   
Sbjct: 238 GSIKGAFIGALMVGLVDTFASVL--------------VPELSSMMIYIFMAFILLIKPQG 283

Query: 339 LLR 341
           L  
Sbjct: 284 LFS 286


>gi|157363982|ref|YP_001470749.1| inner-membrane translocator [Thermotoga lettingae TMO]
 gi|157314586|gb|ABV33685.1| inner-membrane translocator [Thermotoga lettingae TMO]
          Length = 284

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 98/295 (33%), Gaps = 25/295 (8%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            +Y + + GL++V G + +++        I  Y+   L S +    ++ +P++ +++ A 
Sbjct: 14  CVYSLVSVGLTLVWGLMDIINFAHGDFMMISMYTVFWLYSLFKWDPFISLPIAVIVAAAL 73

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G+      +K   +   +  L+ +      +  +                        S+
Sbjct: 74  GLTTYKLIIKRLVNAPGLMALLATFGLSLFIRNFAQFLWSPN----------YRFIGESI 123

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
           +   R     +I      +  +G   ++  I L+++RT I  A +    N+     +   
Sbjct: 124 LSGKRIIFGDIIIGFPQLFAAVGSILITLLIALFIKRTRIGKAIQATAQNRDIAELMGVD 183

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
                +  FA+S   +G+AG   +                ++   IV LGG  ++     
Sbjct: 184 TEKIYMLTFAISGICVGVAGTLLSGIFPV--YPESGAMYGLLAFVIVALGGFGNIWGAFY 241

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           A  ++     L        F   + F             +   LV+  R   L  
Sbjct: 242 AGILIGLAEALGGFYFGTQFKYAIAF-------------LIYLLVLQFRPKGLFG 283


>gi|312195627|ref|YP_004015688.1| inner-membrane translocator [Frankia sp. EuI1c]
 gi|311226963|gb|ADP79818.1| inner-membrane translocator [Frankia sp. EuI1c]
          Length = 777

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/301 (10%), Positives = 74/301 (24%), Gaps = 14/301 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y     +   IY + A GL +   + G+ +        + A+ Y  +   +     L +
Sbjct: 6   QYTILGLVLGGIYGIAASGLVLTCTTSGIFNFGHGSIAMLSAFVYWQVRFGWHWPAPLAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                +       +   S+           L  +     I +         A        
Sbjct: 66  VAVLGVFAPALGALLHVSIMR--------GLRETTEITRITVTVALTVGSLALANWIWDP 117

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                         +   +           L+    ++  +  +  RT      R + D+
Sbjct: 118 TVPRRFDYFFGGTHQVRVAGSRITYHELIALVMAVVIAVGLRFFFYRTRTGVGMRAVVDD 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                            ++A+ S    +AG                    I   +  + G
Sbjct: 178 PPLLRLSGGRPERLATLSWALGSMLAALAGILITPILGGSLDPNALTLLVIDAFAAAVFG 237

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
            + S+        +L                +        +    +L +I LF+V+L   
Sbjct: 238 RLRSVPLTFLGAVVLGLANNYVLAYFPSERWTW------TSDFRISLPMILLFVVLLWLP 291

Query: 337 H 337
            
Sbjct: 292 Q 292



 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 97/250 (38%), Gaps = 8/250 (3%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG----LSI 92
             + +  +  + + + A  L  + G  G ++L  V   AIG       G           
Sbjct: 335 PTVVNTMVTGMTFAIIALSLVPLTGYAGEINLAPVSFGAIGTIIAYHYGITGHGVDTRMT 394

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
              + ++A +    G ++ LP+L+ RG YLA+AT+        +++              
Sbjct: 395 IWGLLLAAAVCAVVGALVALPALRLRGLYLALATMAFGVFVSTMVVADTVPRVLPLVHTK 454

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                     V          ++   + + +  +   +  L  ++    RR+        
Sbjct: 455 FSIFPNGTLNVPRPRFGPIDLANGGQFLMVVTVLFAVLGVLMVAL----RRSGYGQRLVA 510

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           ++D+  A  +L    +  KLS F +S+A  G+ GA  +A+   +SPD F    ++ ++  
Sbjct: 511 LKDSPAACATLGQNPVRLKLSVFMLSAAIAGVGGALMSAAVVSVSPDRFTIFVSLGLVMT 570

Query: 273 VILGGMTSLS 282
           V++ G+  +S
Sbjct: 571 VVVAGIGYVS 580


>gi|161523266|ref|YP_001578278.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
 gi|189351961|ref|YP_001947589.1| branched-chain amino acid transporter permease [Burkholderia
           multivorans ATCC 17616]
 gi|221202199|ref|ZP_03575234.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia multivorans CGD2M]
 gi|221208740|ref|ZP_03581739.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia multivorans CGD2]
 gi|221214308|ref|ZP_03587280.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia multivorans CGD1]
 gi|160340695|gb|ABX13781.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
 gi|189335983|dbj|BAG45053.1| branched-chain amino acid transport system permease protein
           [Burkholderia multivorans ATCC 17616]
 gi|221165963|gb|EED98437.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia multivorans CGD1]
 gi|221171372|gb|EEE03820.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia multivorans CGD2]
 gi|221177993|gb|EEE10405.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia multivorans CGD2M]
          Length = 294

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 105/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +GL  W ++ ++ +I GA G+ +    L++      +  L+++     ++        G
Sbjct: 63  YFGLPYWAMLVLAPLIVGAFGIAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 123 SSGQPYDVPSQLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +                     +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSIVTGLLLGVIEGFTRVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L+R   L  
Sbjct: 277 IMAIVLLIRPAGLFG 291


>gi|293603214|ref|ZP_06685647.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292818445|gb|EFF77493.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 321

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 62/311 (19%), Positives = 126/311 (40%), Gaps = 30/311 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 +  S   ++LIY + A  L++++G  G+++L     +  GAY+  IL      S
Sbjct: 23  PALGLDFYISFVRRVLIYALAATSLNLILGYGGMVALGHAAFFGAGAYAVGILAMSGITS 82

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             ++ PV+ +++     I G  SL+ RG Y  + TL  +++   I I  +          
Sbjct: 83  ALIVWPVAMLLAAVLAAITGAISLRTRGVYFIMITLAFAQMLFYIFISLRQYGG------ 136

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                        +L  +   P   +  ++  YY++L +  L   +   +  +    A +
Sbjct: 137 ---------EDGLNLPGYSTLPGIDLANDVSFYYLVLALFALLMWVFSRVMSSRFGTALQ 187

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            IR+N+    S+   +   KL AF +S A  G+AGA  A     ISP +  ++++  ++ 
Sbjct: 188 GIRENESRMESMGYPVYRIKLVAFTLSGAAAGLAGALLANHNLFISPSLMHWTQSANLLI 247

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +V++GG+           +++ + E+      Y+                  + + L  V
Sbjct: 248 MVLVGGIGLRWGGVAGAVVMLTLEEMLRLWTEYWH---------------LPLGVLLLCV 292

Query: 332 ILMRSHSLLRL 342
           +      L+ L
Sbjct: 293 VFGAPRGLVGL 303


>gi|269925703|ref|YP_003322326.1| inner-membrane translocator [Thermobaculum terrenum ATCC BAA-798]
 gi|269789363|gb|ACZ41504.1| inner-membrane translocator [Thermobaculum terrenum ATCC BAA-798]
          Length = 307

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 96/315 (30%), Gaps = 32/315 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY-----------VILGSR 87
           +        ++ + A G ++V G L L++      + + ++                   
Sbjct: 8   LLDGIALGAVFALIALGYTLVYGILELINFAHGDLFMLTSFMSLTVLDAIGVDSGSPFYV 67

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             ++  L + V  +  G   +I+   + +   +   +A LI +     ILI+      G 
Sbjct: 68  KVIAFLLGLVVPMIFGGVLNVIIERVAYRRLRNAPRLAPLISAIGVSFILIQIGLTWKGP 127

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
           +                  +    +    + + +    V+     L   +   +  T I 
Sbjct: 128 S-------PVSFPRLWIPPVNLLDWTGLGLRFYLRSLLVIAMTVILLILLRFVVLHTKIG 180

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
            A R    ++ A   +   I      AF +  A  G AG  +      +      F   +
Sbjct: 181 KAMRATSQDRDASALMGININRTISFAFLLGGALAGAAGLMYGLHTGTMVFT-RGFETGL 239

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              +  +LGG+ +LS       I+  V           + +              ++   
Sbjct: 240 KAFTAAVLGGIGNLSGAVLGGFIIGIVESFSNYYLQSTWTNA-------------VIFAI 286

Query: 328 LFLVILMRSHSLLRL 342
           L ++++ R   LL  
Sbjct: 287 LIIILVFRPSGLLGE 301


>gi|222479575|ref|YP_002565812.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239]
 gi|222452477|gb|ACM56742.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239]
          Length = 319

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 102/313 (32%), Gaps = 10/313 (3%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y+ +  +   I V+ + GLS+V       +        IGAY+ ++     G     ++ 
Sbjct: 6   YLANGLVFSSIIVLGSIGLSLVYSIADFANFAHGDTMTIGAYTALVTFGAVGGLGGAVLG 65

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           +      A  + + + ++   G    I   +  +    ++         +A I +     
Sbjct: 66  LPYGFFLALVVGIAVAAVVAVGTEKLIYEPLDVDSIGLLITSIGIAFIYRAVIQIRFGSG 125

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
           F    ++ L          V   +    ++     L   + + L+ T +    R + DN 
Sbjct: 126 FTRFDIQPLRPIESLVPYGVRVTLHDVAIVGSAAVLVVGLHVLLQYTDLGRKMRAMADNP 185

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                        KL  + + +   G  G F              F+  +++ + VILGG
Sbjct: 186 DLARVSGIRTKRVKLWTWVIGAGLAGAGGVFLGLFNQL--SPRMGFNLLLVIFAAVILGG 243

Query: 278 MTSLSKIAKATAILIGVVELCCGMN--------FYYFNSLLKFDCSFNMRHTTLMVIALF 329
           + S+        ++  + +L    +           +   +  +         +  + + 
Sbjct: 244 IGSVYGAMAGGFLIGMINQLTPFFSNVVEALPIAPNWLETVLENLISIEYANAIAFVIMV 303

Query: 330 LVILMRSHSLLRL 342
           +V+L+R + +   
Sbjct: 304 VVLLVRPNGIAGE 316


>gi|89092361|ref|ZP_01165315.1| probable transmembrane ABC transporter protein [Oceanospirillum sp.
           MED92]
 gi|89083449|gb|EAR62667.1| probable transmembrane ABC transporter protein [Oceanospirillum sp.
           MED92]
          Length = 295

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 49/318 (15%), Positives = 106/318 (33%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           +  FL +        +    I    Y + + GL+I+ G L +++      Y +GA+   +
Sbjct: 1   MATFLGINLFGLFGQLLVGLINGSFYALLSLGLAIIFGLLKIINFAQGALYMLGAFFAWM 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
             +  G++ W  +    +  G  G++M    L+   +   + +L+++     IL      
Sbjct: 61  ALNYMGINYWAALLFVPLAVGFIGILMERFLLRPIANEDHLYSLLLTFGLALILQGAFTH 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G +G+  A                      F+    +  ++++    + A     + +
Sbjct: 121 LYGSSGLSYAIP----------EELKGGNRLPFMYLPNYRAWIIVASIIVCAGTWYMIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N +   +    +       F       G AG   A             
Sbjct: 171 TKLGAYLRAGTENPQLMQAFGINVPLIVTLTFGFGVGLAGFAGVMAAPVYSV--SPDMGS 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  I+V +IV++GGM S+         +  V  L                  +    TT+
Sbjct: 229 NMLIVVFAIVVIGGMGSIGGAILTGLGMGVVEGLTKYF--------------YPEASTTV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           +   + +V+L +   L  
Sbjct: 275 IFAVMVIVLLTKPAGLFG 292


>gi|110678207|ref|YP_681214.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter denitrificans OCh 114]
 gi|109454323|gb|ABG30528.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter denitrificans OCh 114]
          Length = 325

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 57/338 (16%), Positives = 132/338 (39%), Gaps = 20/338 (5%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +  +K   +  L+ +    +      A   +         + +  + + G+ +    +G 
Sbjct: 1   MNFSKIQILGVLVFLAVVFVGVPVFIAATGRWDFYFTLTSVALLAIASAGVWLTF-YIGR 59

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           +++       +GAY   IL  + G S W+ +P + + +    +++GLP L+ RG Y A+ 
Sbjct: 60  INIGQGAFALVGAYVSAILVVKAGWSFWISLPAAGLFAALVAVLIGLPILRLRGVYFAMI 119

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL+++++     +        K    +          +  +  F    ++ +      Y+
Sbjct: 120 TLVLTQVATLTALALPITNGAKGITNIPLPGGISIFGITLIPDFSTLENARMA----FYF 175

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
             + +  ++ + +  L  + + +  R+++ N++   S+   I + ++  FA+SS F G+ 
Sbjct: 176 TAIILMIITYAALYRLVNSRLGHLCRSMQQNEELASSIGVNITYIRILIFAISSFFGGVG 235

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA F +    + P  F   +++  +    LGG+  +      T +L    +L        
Sbjct: 236 GAMFGSISQSVYPATFVVKDSVDFMLNCFLGGLGYVFGPMLGTLVLYFGWDLL------- 288

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                     F      +    L L+I    + LL LR
Sbjct: 289 --------FEFGKYQMLIYATLLILIIRFLPNGLLSLR 318


>gi|94984840|ref|YP_604204.1| inner-membrane translocator [Deinococcus geothermalis DSM 11300]
 gi|94555121|gb|ABF45035.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Deinococcus geothermalis DSM 11300]
          Length = 313

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 56/289 (19%), Positives = 111/289 (38%), Gaps = 44/289 (15%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGL----------SIWLLIPVSAMISGACGMIMGL 112
            G LSL     YA+G Y   IL +                 L   V+A++ G  G+ +G+
Sbjct: 31  AGQLSLASPGFYALGGYVAAILLTNPAFSGLRDTLGNGMFPLTWLVAALLCGLLGLFVGV 90

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
           P+L+ RG YLA+AT+   EI + + +    +T G  GI+   + +      +        
Sbjct: 91  PALRLRGIYLALATIAFVEILRVVSLNLA-VTGGAIGIFGIPQAFGFQDRWQ-------- 141

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
                       ++   +  L+      L R+ +  A+R IR+++ A  ++       K+
Sbjct: 142 ----------YLWLFGPLLLLTLLFARQLERSRVGRAFRAIREDELAADAMGVPPTRYKV 191

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
            AF + +   G+ GA  A   +  +     F  +I +++ V++GG  ++       A+L 
Sbjct: 192 LAFVIGAVLAGIVGAMSAPFLNTWNAKQGTFDASIAILAFVLIGGSRNIWGPVVGGALLT 251

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            + E+   +                     +  + L +  L     ++ 
Sbjct: 252 AIPEVLRFLAD---------------WRLIINGLVLVVASLYLPQGIVG 285


>gi|300702489|ref|YP_003744089.1| branched-chain amino acid transporter permease, membrane component
           (livh) [Ralstonia solanacearum CFBP2957]
 gi|299070150|emb|CBJ41440.1| putative Branched-chain amino acid transport system permease,
           membrane component (livH) [Ralstonia solanacearum
           CFBP2957]
          Length = 294

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 108/315 (34%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y M + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGVPLPAMLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLTWMGLS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              L  W+++  + +  GA GM++    L+F      +  L+++     ++        G
Sbjct: 63  YLDLPYWVMLVAAPLAIGAVGMVIERTMLRFIYKLDHLYGLLLTLGVTLVIEGVFRAIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+  +      G T             F++   +  +V++    +  +    + +T +
Sbjct: 123 VSGLPYSTPELLSGAT----------DLGFMVLPNYRAWVVVASLTVCFATWFLIEKTKL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +   +  
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPLMVTLTYGFGVALAAFAGVLAAPVIQI--SPLMGQNMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+         L  +  L                  +    +T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSIVTGLGLGVIEGLTKVF--------------YPQASSTVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + LV+L+R   L  
Sbjct: 277 IMALVLLVRPAGLFG 291


>gi|264677358|ref|YP_003277264.1| inner-membrane translocator [Comamonas testosteroni CNB-2]
 gi|299533056|ref|ZP_07046442.1| inner-membrane translocator [Comamonas testosteroni S44]
 gi|262207870|gb|ACY31968.1| inner-membrane translocator [Comamonas testosteroni CNB-2]
 gi|298718941|gb|EFI59912.1| inner-membrane translocator [Comamonas testosteroni S44]
          Length = 327

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/337 (12%), Positives = 106/337 (31%), Gaps = 16/337 (4%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R +   K L L+ ++    L L    +       +     +I  + A GL++V G + +
Sbjct: 2   MRKDLDYKPLLLVPLLALATLPLVGSPSTWLTLTVAGLAMGMIIFVIASGLTLVFGLMDV 61

Query: 66  LSLNCVIAYAIGAY-SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           L+    +  A+GA+ +  +LG+    +    +  + +      ++  L +      +   
Sbjct: 62  LNFGHGVFIALGAFVATSVLGAMGDWTGSAQLWRNLVAVLPAMVVAMLVAGALGLAFERF 121

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
               +       ++           +                     +       E +  
Sbjct: 122 IVRPVYGQHLKQILITMGGMIIGEELIKVIWGPQQIPLPLPEAMKGAWLLGDAAVEKYRV 181

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           + +L    + A +   L RT I    R    +++   SL   +    ++ F   SA  G+
Sbjct: 182 FAVLVGAAVFAVLAWTLARTKIGLLIRAGVQDREMVESLGYRVRRLFVAVFVAGSALAGL 241

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            G  +   +  +   M     N+++  ++I+GG+ S         ++  +      +   
Sbjct: 242 GGVMWGLYQQNVVAQM-GAQVNVLIFIVIIIGGLGSTGGALIGALLVGLMANYTGFLVPK 300

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                               +  +  V+L R   +  
Sbjct: 301 VALFSN--------------IALMVAVLLWRPQGIYP 323


>gi|331002579|ref|ZP_08326095.1| hypothetical protein HMPREF0491_00957 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330408307|gb|EGG87783.1| hypothetical protein HMPREF0491_00957 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 291

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 84/271 (30%), Gaps = 13/271 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     + Y + A G S++ G L L++ +    YA GA   +I           ++  
Sbjct: 6   IFNGLALGMGYALIAVGYSLIFGILRLVNFSHGAIYAFGAEMAMIFIGMRFGITAGIVTA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAI-ATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             +       I  L     R       A+LI +    NI+     +  G           
Sbjct: 66  MILTGVLGICIDKLALEPLRKKKSKPIASLITTIGISNIITNLLIVFLGSE--------- 116

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                  ++           +       + L    L   ++  + +T I  A R  + N 
Sbjct: 117 --KRNFNNIFGDGSIKFGNTVLTHTQIMMCLVSLALMLILMFIVYKTKIGLAMRATQQNS 174

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           KA   +   + F     F ++     +AGA        + P+M  F   +   +  +LGG
Sbjct: 175 KAAAMMGINVDFVIAFTFFLAGVCATIAGALVGGYYQIVYPNM-GFMAGLKAFAAAVLGG 233

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           + SL        I+     +        +  
Sbjct: 234 IGSLPGALLGGLIVGVSESMAATFLGSTYRD 264


>gi|197118326|ref|YP_002138753.1| branched-chain amino acid ABC transporter membrane protein
           [Geobacter bemidjiensis Bem]
 gi|197087686|gb|ACH38957.1| branched-chain amino acid ABC transporter, membrane protein
           [Geobacter bemidjiensis Bem]
          Length = 291

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 101/305 (33%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++      + +GA+  ++L S + +++++ I  
Sbjct: 6   LVNGVALGSVYALIALGYTMVYGIITLINFAHGEIFMVGAFIGLLLVSFFKVNVFVAIIG 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+++ L + +       ++ LI +      L     +  G            
Sbjct: 66  AMIFCMIMGVLIELIAYRPLRKSSRLSALISAIGVSIFLSSLALMVFGADAKGFP----- 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                       +              ++     L  ++   +++T I  A R   ++  
Sbjct: 121 -----DGAFPVHQIQVGSADISTLQLLIIGVSAALMMALEFIVQKTKIGKAMRATSEDYN 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       FA+ SA     G       + +S +M      +   +  +LGG+
Sbjct: 176 TSALMGINVNRVISFTFALGSALAAAGGVLVGVLFNAVSFNM-GLMAGLKAFAAAVLGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+                  G      + +      ++     +    L LV+L++   
Sbjct: 235 GSIPGAML-------------GGLLLGVSEVFGVAIGYSSYRDAIAFTILVLVLLVKPTG 281

Query: 339 LLRLR 343
           LL  +
Sbjct: 282 LLGQK 286


>gi|121607352|ref|YP_995159.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121551992|gb|ABM56141.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 353

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 90/232 (38%), Gaps = 3/232 (1%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
            V G  G+L       Y +GAY+Y ++    G S   ++     I+ A    + L ++ F
Sbjct: 66  FVWGVAGILCFGQAAFYGLGAYTYAVVAINMGGSTLAVVL---AITVAGCAALALGAMMF 122

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +++ +   +L K+   T G+A      RL          +         +
Sbjct: 123 YSRMADVYLGVITLVATLLLFKYANSTAGQAYAIGTARLGGFNGIPGFPVLGVPGWPDTL 182

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +  + +Y+V +    L   +  WL           IR+N+         +  AK  AF +
Sbjct: 183 VTGMALYFVGMVALLLCWLMFRWLAVRPFGRLLAGIRENELRAELSGHDVRLAKTLAFGL 242

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
             A  G+AG  +A   + ++P++F    +  +I  V++GG+ +L        
Sbjct: 243 GGAVAGLAGVLYACWAEIVTPEVFSLGVSAEIIIWVLVGGLGTLWGPMFGAV 294


>gi|89901364|ref|YP_523835.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89346101|gb|ABD70304.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 290

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 91/301 (30%), Gaps = 27/301 (8%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
           Q   Y + A GL++V G++ +++L       + AY    + S  G +    IP++ ++  
Sbjct: 15  QGGSYALIALGLALVFGAMKVINLAHGELVLLSAYVAYSVESGLGWNPIFAIPIALVVVC 74

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
              +++     + + D    + ++   I   +      I                  +  
Sbjct: 75  LASVMVYFVVGRIKKDREINSLILTYGIGVILTNLILLIW------------KADVRSTG 122

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           S                      +    +   +  WL R+    A R +  N+ A   + 
Sbjct: 123 STWLQEAIVIGPFYSMRSEVLFFIVSLVMMGGLWWWLSRSWYGRAVRAVSSNRDAAKLMG 182

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
               + +L +F V+     +AG   A     +    +     +    I +L G+ S+  +
Sbjct: 183 IDPGYTELVSFVVAGILAAVAGV--ALFSYGVVSPAYGSVLTVKAFIITVLAGIGSIPGV 240

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                +L     L   +       L+                   LV+ +    L   + 
Sbjct: 241 LIGAVLLGVAEALTVTLASSALQELVGMG-------------LFLLVLFVMPSGLFGAKG 287

Query: 345 P 345
            
Sbjct: 288 R 288


>gi|294083917|ref|YP_003550674.1| branched-chain amino acid permease [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663489|gb|ADE38590.1| branched-chain amino acid permease protein [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 287

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 53/298 (17%), Positives = 104/298 (34%), Gaps = 24/298 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            IQ  IY + A GL++V G L +L +     + +G Y   ++ +    S  L +  + +I
Sbjct: 11  LIQGAIYALIALGLTLVYGLLRILHVAHAALFTLGGYI-GVVVTNGSGSFLLALVTAMLI 69

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
            G  GM       K   + + +  LI S        +   I  G  G+            
Sbjct: 70  VGIVGMASYRVIYKPLLNRMPLIALIASIGVFIASEELFRIFFGAYGLSYDTPPLKGQIE 129

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +             +        V++    L + I      T +  A R    + +   S
Sbjct: 130 ILP----------GIPLSHARILVVVLAVGLLSGIGWMAVHTRMGVATRATVVDPEMASS 179

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
               +   + + F + SAF G AG   +   + + P M     +   ++I++LGG+ S+ 
Sbjct: 180 SGVNVETIRYTTFFIGSAFAGAAGVMVSLLNNLVEPTM-GAVPSYKALAIIVLGGLGSVR 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
               A+  L  +          + +              ++    L +++++R   LL
Sbjct: 239 GALIASLALGIIESFGTIYAGNFLD------------RDSIAFAFLIMILMIRPQGLL 284


>gi|209515794|ref|ZP_03264657.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209503821|gb|EEA03814.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 294

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/316 (13%), Positives = 105/316 (33%), Gaps = 26/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGVPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            + L  W+++ ++ +I G  G+ +    L++      +  L+++     ++        G
Sbjct: 63  YFNLPYWVMLVLAPLIVGLVGIAIERSMLRWLYKLDHLYGLLLTFGLTLVIEGVFHSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 123 SSGQPYDVPSALSGAT----------NLGFMFLPNYRAWVVVASLAVCFATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPLMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +  L                  +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSIMGSILTGLMLGVIEGLTRVY--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLRL 342
            + LV+L+R   L   
Sbjct: 277 IMALVLLVRPAGLFGR 292


>gi|163794786|ref|ZP_02188756.1| ABC transporter permease protein [alpha proteobacterium BAL199]
 gi|159180059|gb|EDP64584.1| ABC transporter permease protein [alpha proteobacterium BAL199]
          Length = 307

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 92/306 (30%), Gaps = 15/306 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + A GL++V G +  ++L   + Y +GAY  V      G     LI  
Sbjct: 10  VLNGLQLGVLLFLVAAGLTLVFGVMDFINLAHGVQYMLGAYLAVTFYGLTGSFFMALILA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                    ++  L              L    +   +    + +       Y    L  
Sbjct: 70  LLAALAFGLLLEFLVFRHLYDRDHLDQVLATFGVILFLNEGVRIVWGAAPLSYPIPDLLK 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +               Y I+   ++L     +  + + + RT +    R    N +
Sbjct: 130 GTIPLMD----------GFGYPIYRVAMILSGLATAVLLWVLVTRTRVGMLVRAGATNPR 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I    +  F   +   G AG                    I+   ++++GG+
Sbjct: 180 MVAALGVDIRRLFMVVFGFGAMLAGFAGVMAGPIFSV--EPGMGDGVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335
            S+     A  I+  V  L        F +++    +        + L+ + +  V+  R
Sbjct: 238 GSIRGAFVAALIIGLVDTLGRSFMTDIFKTMMAPAAANQVGPAIASMLIYLLMAGVLFFR 297

Query: 336 SHSLLR 341
              L  
Sbjct: 298 PTGLFP 303


>gi|91790943|ref|YP_551894.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91700823|gb|ABE46996.1| inner-membrane translocator [Polaromonas sp. JS666]
          Length = 306

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 71/324 (21%), Positives = 134/324 (41%), Gaps = 29/324 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  LL   +        +  +   +I+I+ + A  L++V+G  G+++        IG
Sbjct: 3   IIVLVLLLALPWAATASDHAFYTTFATRIMIFALAATSLNLVLGFGGMVAFGHAGFLGIG 62

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  IL  +   S WL  P + +ISGA   ++GL SL+ +G Y  + TL  +++   I 
Sbjct: 63  AYTVGILMDKGFSSAWLSWPAATLISGAIAGLIGLVSLRTKGVYFIMITLSFAQMLYFIS 122

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                 +   G  + S  RF              +YV+LG+C      
Sbjct: 123 VSLTYFGGDDGMSLPGRSIIQFGPDLASDDRF--------------FYVVLGLCVAVLFF 168

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L         ++IR+N+    S+   +   KL AF +S A  G+AGA  A     IS
Sbjct: 169 LHRLINGRFGRVLQSIRENETRMSSIGYPVFRYKLVAFTISGALAGLAGALIANQNGFIS 228

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P +  ++++  ++ ++ILGG+  L      + + + + E    +  ++            
Sbjct: 229 PSLMLWTQSGSLMIMIILGGVGYLYGGVLGSVVFLLLEEGLSNVTIHW------------ 276

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                 + + L  V+L     L+ 
Sbjct: 277 ---QLPLGLILLCVVLFAPTGLVG 297


>gi|328952954|ref|YP_004370288.1| ABC-type transporter, integral membrane subunit [Desulfobacca
           acetoxidans DSM 11109]
 gi|328453278|gb|AEB09107.1| ABC-type transporter, integral membrane subunit [Desulfobacca
           acetoxidans DSM 11109]
          Length = 298

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 100/304 (32%), Gaps = 22/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++        + AY  +   S + L   L   +
Sbjct: 10  LINGVSLGSLYALIAIGYTMVYGVLRLINFAHGDFLMVAAYLGLFGLSLFSLPWPLAFGL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++G  G ++   + +       ++ LI +     +L     +  G   +      +F
Sbjct: 70  ALILTGLMGAMLERGAYRPLRRAPRLSLLISAIGVSFLLENLVLVFIGGRPLSFPTPAFF 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G           +    +       Y+ L    + A + + +  T +  A R +  + +
Sbjct: 130 GGA----------WRFGELYLPRLSVYIPLITLIVLAGLFVLIYSTRVGMALRALAFDWE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + S   G+ G  +A    +++         +      +LGG+
Sbjct: 180 TTQIMGVNVNRLISLTFILGSTLAGVGGLLWAMKYPQVN-PFLGILPGLKAFVAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        +L  +      +   +                 L    L +V+L+R   
Sbjct: 239 GSLPGAVVGGVLLGLLEITVVAVFPSWAG-----------YRDALAFGLLIVVLLVRPTG 287

Query: 339 LLRL 342
           ++  
Sbjct: 288 IMGE 291


>gi|46204502|ref|ZP_00049898.2| COG4177: ABC-type branched-chain amino acid transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 342

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/330 (11%), Positives = 90/330 (27%), Gaps = 22/330 (6%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           N + K +  +++     + L +       +  ++  + L Y   A GL I  G  G+LSL
Sbjct: 13  NPFMKPVEWVSLALLAGVILVVLPLMLDGFRLNLVGKYLTYAFVALGLVICWGYAGILSL 72

Query: 69  NCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
              + + +G Y   +                       +                   L 
Sbjct: 73  GQGVFFGLGGYCMAMYLKLEASSVENTKIQSTPGIPDFMDWNQITSLPWFWHPFQSLPLT 132

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI--------- 167
                                 +            +A  L  L    +            
Sbjct: 133 LLLVVAVPVIFAFIISVAMFKRRVGGTYFAIITQAIAAILTILIVGQQGYTGGINGITDL 192

Query: 168 -RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                +       +  +Y+V  G+      +  +++++ +      +R+ +        +
Sbjct: 193 RTLHGWDIRTDHAKFILYFVNGGLLIGCILMAQYVKKSKLGRILVAMREKEDRVRFSGYS 252

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +   K+ AF +++ F  + GA F      +SP       ++ ++    +GG  SL     
Sbjct: 253 VAGFKVFAFCLAAGFAAIGGAMFTLQVGFMSPSFVGIVPSVEMVIYTAVGGRRSLFGAVC 312

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
            T ++              +   L      
Sbjct: 313 GTLLVNWAKTSFSESFPDMWLFGLGALFIA 342


>gi|304405846|ref|ZP_07387504.1| urea ABC transporter, permease protein UrtB [Paenibacillus
           curdlanolyticus YK9]
 gi|304345089|gb|EFM10925.1| urea ABC transporter, permease protein UrtB [Paenibacillus
           curdlanolyticus YK9]
          Length = 308

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/289 (12%), Positives = 83/289 (28%), Gaps = 16/289 (5%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
             G + ++++       IGAY+  +  + +  ++   +     +                
Sbjct: 35  TFGLMNVINMAHGELIMIGAYATYVTQNIFKSALPDSLFNWYFVLSIPVSFGIAFLFGLL 94

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
            +   I  L       ++L  W      +           +G T  + +       + V+
Sbjct: 95  LEASLIRHL-YGRPLDSLLATWGVGLALQQLARSIFGAPNVGVTSPTWLDGGLTVMTGVV 153

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                 +++  +     ++ L++ R+      R +  N+     L  +        FA+ 
Sbjct: 154 LPYKRLFIIGLVIVCLFAMYLYIYRSHAGRNMRAVMQNRDMAACLGISTRRVDAMTFAIG 213

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           S   G+AG   A +              +    +V+LGG+  L         +     L 
Sbjct: 214 SGIAGIAGC--ALTLIGPIGPSLGTYYIVDAFMVVVLGGVGKLIGTLFGAIGIGMTNTLF 271

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                                   L+ I +   +  R    + +R+ S 
Sbjct: 272 EYWTNASLGK-------------VLVFICIVAFLQWRPKGFVAMRSRSL 307


>gi|238059606|ref|ZP_04604315.1| ABC branched-chain amino acid transporter permease component
           [Micromonospora sp. ATCC 39149]
 gi|237881417|gb|EEP70245.1| ABC branched-chain amino acid transporter permease component
           [Micromonospora sp. ATCC 39149]
          Length = 394

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/328 (13%), Positives = 91/328 (27%), Gaps = 29/328 (8%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +       +  ++  + L   M A G+ I  G  G+L+L   + + +G Y+  +      
Sbjct: 46  VAPLVLSDFRLALLAKYLCVAMVAVGIGIAWGRGGMLTLGQGVFFGLGGYAMAMHLKLAD 105

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS---------------EIFQ 134
                L     +      +             L    L+                     
Sbjct: 106 AGPGALPDFMQLYGQLDELPWWWRPFASPWFALPATVLLPMAVAFGLGSLVFRRRVRGAY 165

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             ++           +            +  +  FF +     + +  +Y ++       
Sbjct: 166 FAILSQALAAAMVILLVGQQGTTGGTNGLTDIQGFFGYDLDDPVNQRTVYLLIAAALLAL 225

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    L R+        +RD ++    L       K+ A+ V++   G+AGA F  +  
Sbjct: 226 LAGARQLIRSRYGELLVAVRDGEERVRFLGYDPATVKVVAYVVAAGMAGLAGALFVPAVG 285

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ISP +     +I  +  V +GG  +L         +                       
Sbjct: 286 IISPALIGIVPSIEFVIGVAVGGRATLLGPVLGAVAVAWARTALSE-------------- 331

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
            F    T L  +   LV+      L  L
Sbjct: 332 RFPGTWTYLQGLLFVLVVAFLPGGLASL 359


>gi|160897995|ref|YP_001563577.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160363579|gb|ABX35192.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 330

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/298 (14%), Positives = 97/298 (32%), Gaps = 18/298 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               +I  + A GL++V G + +L+    +  A+GA+    +    G           ++
Sbjct: 42  LAMGMIVFIIASGLTLVFGLMDVLNFGHGVFIALGAFVATSVLGAMGDWTGSDQLWRNLL 101

Query: 103 SGACGMIMGLPSLKFRGDYL--AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +    M++ +      G      I   +  +  + ILI    +  G+  I +      + 
Sbjct: 102 AVLPAMVVAMLVAGAIGLAFERFIVRPVYGQHLKQILITMGGMIIGEELIKLIWGPQQMP 161

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             +        +       E +    +L    + A +   L RT I    R    +++  
Sbjct: 162 LPLP-QGMKGAWLLGDAAVEKYRVVAVLVGLAVFALLAWTLSRTKIGLLIRAGVQDREMV 220

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +L   +    +  F   SA  G+ G  +   +  + P M     N+++  ++I+GG+ S
Sbjct: 221 EALGYRVRRLFVGVFVAGSALAGLGGVMWGMYQQSVVPQM-GAQVNVLIFIVIIIGGLGS 279

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                    ++  +      +                       +  +  ++L R   
Sbjct: 280 TGGALIGALLVGLMANYTGFL--------------VPKVALFSNIALMVAILLWRPQG 323


>gi|148259499|ref|YP_001233626.1| inner-membrane translocator [Acidiphilium cryptum JF-5]
 gi|146401180|gb|ABQ29707.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidiphilium cryptum JF-5]
          Length = 291

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 94/305 (30%), Gaps = 20/305 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G +++ G  G+L+L       I A     +G+  GL  ++    
Sbjct: 7   LIDGFAISTLYALGALGFTLIFGVSGVLNLAHGGLMVIAAMIAWYVGTSIGLGPYVGAAA 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +     ++     ++         +  +    + + +    +  G          + 
Sbjct: 67  GLAVCLVAALVTYGGIVRP-----IENSRAVPAHERELFVLTATLLWGVMIQEALSYAFT 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +         V   I   ++      +  ++ L + RT I         N +
Sbjct: 122 NSPITVQPLIAGTVSILGVRTPINEIFIAAVAWAVMGALWLLVNRTRIGRRLLAASINPR 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +    L  + +     G+AG    +     S  +   +      +IV+LGG+
Sbjct: 182 ALTLLGFELDQIYLFVWVIYGLLAGIAGVLLGSFLGSGSGYVPGLTG--SAFTIVVLGGL 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+S    A  I+  +  L   +       +                I L +VI MR   
Sbjct: 240 GSVSGTLIAAYIVGYIETLTAYLVSPSLREVPAL-------------ILLVVVIYMRPQG 286

Query: 339 LLRLR 343
           LL  R
Sbjct: 287 LLGRR 291


>gi|84502157|ref|ZP_01000305.1| possible permease of ABC transporter [Oceanicola batsensis
           HTCC2597]
 gi|84389517|gb|EAQ02236.1| possible permease of ABC transporter [Oceanicola batsensis
           HTCC2597]
          Length = 345

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 58/322 (18%), Positives = 112/322 (34%), Gaps = 17/322 (5%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+  L++   L A             ++IY M    L ++ G  G+L       + +GAY
Sbjct: 13  VILTLVVAAILIAAMPLLIGTYTLTVLVIYGMLGLSLGLIWGFGGILCFGQAAFFGLGAY 72

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
            Y I     G S   +I    + +G   ++  +       D       ++  +     I 
Sbjct: 73  IYAISAVNIGESTLPMILAVLLTAGFALLLGAMMFYGRLTDVYLGVITLVVTLILFKFIN 132

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                 G   +    RL                     I+   +YYV      +   ++ 
Sbjct: 133 STA---GPQYVIGEARLGGFNGIPGFQTLNVPGDPGAYIWGDALYYVCAVALVIVFLLVT 189

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           WL R++       IR+N+     +   +   K   FA+ +A  G+AGA FA+  + ++P 
Sbjct: 190 WLLRSSFGRIAVGIRENETRMALMGYDVAARKTVLFAIGAAIAGLAGALFASWAEIVTPT 249

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +F   ++  +I   I+GG+ +        A L  +  +                    + 
Sbjct: 250 LFSLGQSAEIIIWCIVGGLGTRLGPVVGAAGLAYLEFVL--------------GQQSMID 295

Query: 320 HTTLMVIALFLVILMRSHSLLR 341
           +T +M + L + +L     L+ 
Sbjct: 296 NTLIMGLVLVIFVLFLPRGLVP 317


>gi|260426167|ref|ZP_05780146.1| inner-membrane translocator [Citreicella sp. SE45]
 gi|260420659|gb|EEX13910.1| inner-membrane translocator [Citreicella sp. SE45]
          Length = 297

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 79/270 (29%), Gaps = 12/270 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +       Y + A GL++V   +GL++        I  Y  +  G    L   L I ++
Sbjct: 9   VNAVSLGGTYALLALGLAVVFSIMGLINFAHGELMTIAGYVLMYCGLAG-LPFVLSIGLA 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
              +    ++M   + +   +      LI S     +L              V       
Sbjct: 68  IGAATVAAVLMERIAFRPVRNASGATMLITSFAVSMVLQVLFQNLISVRSQPVLLPP--- 124

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                  +          +  +     +     +   +  +++R     A R   ++   
Sbjct: 125 -------LLTDSVRMFGFVIGVNKLLSIAATVVMLIFLDWFMKRQKTGIAMRAAAEDFAV 177

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +          AFA+S    G+A   + + R  + P M  F+  +      ILGG+ 
Sbjct: 178 ARLMGIRANSVIAGAFALSGLLAGVAAVLWVSQRASVDPLM-GFTPVLKAFIAAILGGLG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           SL        +L  +           +   
Sbjct: 237 SLRGAVAGGFLLGFIEIYLAAYLPPEWQEF 266


>gi|322419263|ref|YP_004198486.1| inner-membrane translocator [Geobacter sp. M18]
 gi|320125650|gb|ADW13210.1| inner-membrane translocator [Geobacter sp. M18]
          Length = 291

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 100/305 (32%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++      + +GA+  ++L + + +++++ I  
Sbjct: 6   LVNGVALGSVYALIALGYTMVYGIITLINFAHGEIFMVGAFIGLLLVATFKVNVFVAIIG 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+I+ L + +       ++ LI +      L     +  G            
Sbjct: 66  AMIFCMLMGVIIELIAYRPLRKSSRLSALISAIGVSIFLSSLALMVFGADAKGFP----- 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                       +              ++     L   +   +++T I  A R   ++  
Sbjct: 121 -----DGAFPVHQIKVGNADISTLQILIIGVSAVLMMGLEFIVQKTKIGKAMRATSEDYN 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       FA+ SA     G       + +S +M      +   +  +LGG+
Sbjct: 176 TSALMGINVNRVISFTFALGSALAAAGGVLVGVLFNAVSFNM-GLMAGLKAFAAAVLGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+                  G      + +      ++     +    L LV+L++   
Sbjct: 235 GSIPGAML-------------GGLLLGVSEVFGVAIGYSSYRDAIAFTILVLVLLVKPTG 281

Query: 339 LLRLR 343
           LL  +
Sbjct: 282 LLGQK 286


>gi|221194629|ref|ZP_03567686.1| inner-membrane translocator [Atopobium rimae ATCC 49626]
 gi|221185533|gb|EEE17923.1| inner-membrane translocator [Atopobium rimae ATCC 49626]
          Length = 291

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 93/289 (32%), Gaps = 12/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + LL+         GAY   I  ++ G+   L   +
Sbjct: 7   LLNGLQLGSIYALVALGYTMVYGIILLLNFAHGDIIMAGAYISWIAMAQLGMHPALAALL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +   A G+ +   +     +   ++ LI +      L     +  G            
Sbjct: 67  SIVGCMALGVAIDKIAYAPLREAPRLSVLITAIGVSYFLESGSQLIFGADAKV------- 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V S +         V   +     +   C  +  +   +++T +  A R + ++  
Sbjct: 120 ----VPSFVNLTTVSFGAVTLSLTAILTVAITCISTIVLTFLVQKTRLGKAMRAVSEDMG 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FAV SA  G+    ++ +  + +P M             +LGG+
Sbjct: 176 AARLMGVNVNSTISFTFAVGSALAGIGAILYSMAYHQATPTM-GIMLGTKAFVAAVLGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            S+        ++  V      +    +   + F     +       + 
Sbjct: 235 GSIPGAVVGGLVVGFVEVSVAALGLSVWQDAVVFLLLIVVLVVKPTGLL 283


>gi|126731238|ref|ZP_01747045.1| branched-chain amino acid ABC transporter, permease protein
           [Sagittula stellata E-37]
 gi|126708149|gb|EBA07208.1| branched-chain amino acid ABC transporter, permease protein
           [Sagittula stellata E-37]
          Length = 336

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/334 (10%), Positives = 86/334 (25%), Gaps = 19/334 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           F+      S   +           + A G++++ G L   +       A G    +++  
Sbjct: 3   FVNALVALSNFVLIPAIAYGSQLALGALGVTLIYGILRFSNFAHGDTMAFGTMVTILVTW 62

Query: 87  RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            +              L IP     +    ++      +F     A   + +      + 
Sbjct: 63  LFQSWGIGLGPLPTALLAIPFGIAGTAVLVLLTDRVVYRFYRAQKAKPIIFVMVSIGVMF 122

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I                             +     +  +  +      ++    + A +
Sbjct: 123 IYNGLTRFVLGADDQIFSDGERFIISAGDFKRATGLAEGLGLKTTQAITVIVAILVVAVL 182

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L RT    + R   DN+              +  + + +  I +AG  +   +    
Sbjct: 183 FWFLNRTRTGKSMRAYSDNEDLALLSGINPERVVMVTWLIVAGLITVAGVLYGLDKSY-- 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309
                F   + + +  I+GG+ S         ++             +   M        
Sbjct: 241 KPFTYFQLLLPIFASAIVGGLGSPLGAIAGGFVIAFSEVGITYAWKKVLGYMMPEALEPS 300

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                        +  + L +V+L R   L + +
Sbjct: 301 GLVQLLATEYKFAVSFMILVIVLLFRPTGLFKGK 334


>gi|15899554|ref|NP_344159.1| ABC transporter, permease (branched chain amino acid) [Sulfolobus
           solfataricus P2]
 gi|13816194|gb|AAK42949.1| ABC transporter, permease (branched chain amino acid) [Sulfolobus
           solfataricus P2]
          Length = 345

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/337 (13%), Positives = 111/337 (32%), Gaps = 24/337 (7%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-----ILGSRYGL 90
              I ++ +   +Y+M    L++ +G  G+ +   V+AYA GA+        IL   YGL
Sbjct: 6   SSLILAILLDFSVYLMVVISLNVEIGLTGVPNFGRVLAYAGGAFIAGAVPGRILQIIYGL 65

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG- 149
               ++   ++I+     ++  P +      L +A   +       +  +  +   +   
Sbjct: 66  HGDYILNNPSIIAEINDKLLEQPLMALAILILTLALAGIVGATLGYISSYPALRLREDYL 125

Query: 150 --------------IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                               +      V+    F             +  +LL    +  
Sbjct: 126 GILLLVAGTSLVVVGITYPPIVGGTVGVQVPAVFNALLGQGASLYYKISILLLVFSLIML 185

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   +  + +  A+R +R+N+     L   I   +  A A+     G+AG+ +A     
Sbjct: 186 LLFNLISNSPMGRAFRAVRENEDLVEVLGRDIGVIRGKAMALGGFLAGVAGSLYAFYIGS 245

Query: 256 ISPDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           +    F   + +     ++ILGG  +         I   +  +   ++ Y          
Sbjct: 246 VFAGAFDNLTWSFNPYLMLILGGAGTSIGALLGALIYSTLYHV---IDLYKQTIGYYLHF 302

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                   L  + L +++++R   ++  +       +
Sbjct: 303 DAVWLQYMLFGLVLTIILILRPQGIVVEKAKPLVKPK 339


>gi|304394451|ref|ZP_07376372.1| inner-membrane translocator [Ahrensia sp. R2A130]
 gi|303293361|gb|EFL87740.1| inner-membrane translocator [Ahrensia sp. R2A130]
          Length = 306

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 115/307 (37%), Gaps = 15/307 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     ++  + A GL+++ G +GL++L     Y +GA++   + +  G     +    
Sbjct: 11  LNGLQFGVMLFLMAAGLTLIFGVMGLINLAHGSLYMVGAFACAAVAAATGSWWLGVAASL 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
              + A  ++      +          L   +    +L  +  I     G       + L
Sbjct: 71  VFAAAAGAVVELAVIRR----------LYKRDHLDQVLATFALILVFSEGTRWLFGSFPL 120

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
             +V   +         + Y +F  +++     L+A +++++ RT +    R  + +++ 
Sbjct: 121 YLSVPQGLSGAVTLPGGIQYPLFRLFIIGVGLALAAGLMIFIARTRVGARIRAGQSDREM 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   I       FA+ +A  G+AGA  A+ +             I+   ++I+GG+ 
Sbjct: 181 ISALGVNIDRLYTLVFALGAALAGLAGALVASLQSV--QVGMGEPVLILAFVVIIIGGLG 238

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMRS 336
           S+        I+     L   M    F   ++   +    +   + L+ I +  V+++R 
Sbjct: 239 SIPGAFVGALIVGLSDTLGRSMLPALFAQFMEPSSATAVGSSLSSMLIYIVMACVLVVRP 298

Query: 337 HSLLRLR 343
             L   +
Sbjct: 299 TGLFGAK 305


>gi|182626115|ref|ZP_02953876.1| ribose ABC transporter, permease protein [Clostridium perfringens D
           str. JGS1721]
 gi|177908636|gb|EDT71157.1| ribose ABC transporter, permease protein [Clostridium perfringens D
           str. JGS1721]
          Length = 311

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 93/312 (29%), Gaps = 27/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +++ +      S   I ++  Q+ +  + A G++ V+   G + L+     A
Sbjct: 15  LIGLVLLCIVITIVTPNFLSVSNITNVFTQVSVNAIIAIGMTFVI-LTGGIDLSVGSTLA 73

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I       +    G  ++L I V+A+I  A G+I GL   K +                 
Sbjct: 74  ISGAVGASIVKSTGN-VFLAIIVAAVIGIAVGLINGLLVSKGKLQ-------AFIVTLAT 125

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + I          G  ++             + F   P    I    +    L       
Sbjct: 126 MTIFRGATLVFTDGTPISKLPEAFVKIGNGKLGFMSIPVIITIIIAIIAVYAL------- 178

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +T        +  N+ A           K   + VS     +AG    +    
Sbjct: 179 ------SQTRFGRYLYALGGNEDASRLSGINTDKIKTLVYVVSGFASAIAGVIITSRIGS 232

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            SP+     E   + ++VI      GG  +++       I+  +      MN   F   +
Sbjct: 233 ASPNAGTGFELDAIAAVVIGGTSLAGGEGTITGTLIGALIIGVLNNGLNLMNVSPFYQSI 292

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 293 VKGLVILIAVLL 304


>gi|158425728|ref|YP_001527020.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158332617|dbj|BAF90102.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 371

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/328 (14%), Positives = 95/328 (28%), Gaps = 36/328 (10%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------------ 84
            +  +M  + L Y   A GL +  G+ G+LSL   + + +G Y   +             
Sbjct: 30  PFRLNMVGKYLTYAFVAVGLVLCWGNAGILSLGQGVFFGLGGYCMAMYLKLEASTPEATK 89

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                     +            +             L  A   +   F     +   + 
Sbjct: 90  IQSTPGIPDFMDWNQLTSLPFFWVPFKSLGFSVIAVMLVPAVFALVLAFALFKRRVGGVY 149

Query: 145 NGKAGIYVADRLYFLGTTVRSLI----------RFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                  +A  +  L    +                 +       +  +Y+V +G+    
Sbjct: 150 FAIITQALAAIMSILIIGQQGYTGGVNGITDLRTLHGWDIRTDSAKFILYFVNVGLLIGV 209

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +  +++R+ +      +RD +         +   K+  F  ++A  G+ GA F     
Sbjct: 210 ILLCQFVQRSKLGRILVAMRDKEDRVRFSGYDVASFKIFVFCFAAALAGIGGAMFTLQVG 269

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            +SP     + +I ++    +GG  SL      T ++                    F  
Sbjct: 270 FMSPSFVGITPSIEMVIYTAVGGRLSLLGAVYGTLLVNWAKT--------------SFSE 315

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
           SF       +      V+L+  + L  L
Sbjct: 316 SFPELWLFGLGGLFIAVVLLFPNGLAGL 343


>gi|317402823|gb|EFV83366.1| ABC branched chain amino acid family transporter [Achromobacter
           xylosoxidans C54]
          Length = 632

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 106/319 (33%), Gaps = 26/319 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
           P+     + +T     +    I    Y + + GL+++ G L +++      Y  GA+   
Sbjct: 7   PVFEIFGVPSTALFGQLLLGLINGSFYALLSIGLAVIFGLLNIINFAHGAQYTAGAFLAW 66

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +L +  G++ W  + +  +I  A  +++    +        +  L+++     ++     
Sbjct: 67  MLLNYLGVNYWAALVLVPLIMAAFAIVVERVLISRTYRMDHLYGLLLTFGLALLIEGGLR 126

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
              G +G+                         F+    +  + +     L  ++ + + 
Sbjct: 127 QAYGVSGLPYTIP----------KALTGGVNLGFMFLPWYRGWAVAVSLVLCLAVWVLIE 176

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           +T +    R   +N     S    +       +A+  A   +AG   A         M  
Sbjct: 177 KTRVGAMLRAATENPTIVRSFGINVPLLITLTYALGVALASVAGVIAAPIYQV--SPMMG 234

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            +  ++V ++V++GGM S+     +   L  +  L                  +      
Sbjct: 235 SNLVVVVFAVVVIGGMGSIMGAIVSGFGLGIIEGLTKVF--------------YPEAANL 280

Query: 323 LMVIALFLVILMRSHSLLR 341
            + I + LV+L +   L  
Sbjct: 281 AIFIIMVLVLLCKPAGLFG 299



 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 59/302 (19%), Positives = 119/302 (39%), Gaps = 29/302 (9%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +  +++L + +FA   +++VG +GLLS      +   AY+  I+    G +  L +    
Sbjct: 345 TFLMKVLCFALFAAAFNLLVGYVGLLSFGHAAFFGAAAYATGIVMKLLGATPELGLLAGV 404

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +  G  G++ G  +++ +G Y A+ TL +S++   I ++    T G+ G+    R     
Sbjct: 405 LTGGLLGLVFGAIAIRRQGIYFAMITLALSQLVYFIAVQA-GFTGGEDGLQSVPR----- 458

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                      F    +   + MYY  L +  L  + +L +  +      R++RDN++  
Sbjct: 459 --------GKLFGLFDLDSVMPMYYFTLAVFALGYAFVLRVLNSPFGEVIRSVRDNEQRA 510

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            SL  +    KL AF +S+A  G+AG          S     +  N  V+ + +LGG+ +
Sbjct: 511 RSLGYSTSRYKLLAFTLSAAVAGLAGGLKVLVFGVASLTDVHWHANGEVVLMALLGGIGT 570

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +          + +      +                     +      L +L+    ++
Sbjct: 571 VFGPLAGAFTFVSLQNYLAPL---------------GSWVLIVQGAIFILCVLLFRDGIM 615

Query: 341 RL 342
            L
Sbjct: 616 GL 617


>gi|306841258|ref|ZP_07473969.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO2]
 gi|306845437|ref|ZP_07478011.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO1]
 gi|306274180|gb|EFM55996.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO1]
 gi|306288660|gb|EFM59991.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO2]
          Length = 342

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 53/312 (16%), Positives = 115/312 (36%), Gaps = 10/312 (3%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
               +    +  L+ +   ++LF    +  +  +  S     +   +   G++++ G LG
Sbjct: 13  PSLRSNNHALQPLIVIGLAMVLFATAVSLLANAFWLSATTSAMALSLSVAGVALLYGQLG 72

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           L+SL       +G +  + +G  +     + +    + +   G++ G+P+L+ RG YLA+
Sbjct: 73  LVSLCQFALVGVGGWVTLRIGHGFHPPFEISLMAGGVAAAFIGLLFGIPALRLRGLYLAL 132

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL+++  FQ ++  W     G                     R      +        +
Sbjct: 133 VTLMLAGAFQIVISAWGFPDGGPG----------FLGRADGAGRAMLARPALATEATPYF 182

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
                   L   ++   + T    AW  IR  +    S    ++  K  AFA+S    G+
Sbjct: 183 LYTCLFATLGLMLVQAHKMTRPGRAWALIRKGETVAISSGVNVLVYKAWAFALSGFLAGI 242

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG   A +  ++    F   E++ + ++  +GG         A  +L  +  L   +   
Sbjct: 243 AGGLLAGNVGQLEGRAFSAFESLNLFALATVGGAFHWYGAIIAGLLLRALPALLTDLGID 302

Query: 305 YFNSLLKFDCSF 316
            + ++  F  + 
Sbjct: 303 GYVTIGIFGVAL 314


>gi|254440914|ref|ZP_05054407.1| amino acid or sugar ABC transport system, permease protein,
           putative [Octadecabacter antarcticus 307]
 gi|198250992|gb|EDY75307.1| amino acid or sugar ABC transport system, permease protein,
           putative [Octadecabacter antarcticus 307]
          Length = 361

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 88/313 (28%), Gaps = 11/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L     L   L      S   +  +  Q+ I  + A   S+V+ + G + L+     
Sbjct: 46  LFVLVTSIVLFGLLLGTKFFSPFALTLILQQVQIVGIVAAAQSLVILTAG-IDLSVGAIA 104

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +        RYGL + + +    +     G + G      +     +   +   +  
Sbjct: 105 VLSSVVMGQFTFRYGLPVEVAVTAGLIFGTLIGSMNGWLIAVMKLPPFIVTLGMWQIVLA 164

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +  K  T     I     L            F               + ++ M  + 
Sbjct: 165 ANFLYSKNATIRSQDIEQQAPLLQFL-----GTTFKIGADVDGRGGATFTFGVIAMVLIF 219

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A +   L +TA       + D+ +A       +    +S +AV+     +AG        
Sbjct: 220 AVLSYILSQTAWGRHIYAVGDDPEAAQLSGVNVKRTLISVYAVTGFICAIAGWALIGRIG 279

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   +      + ++VI      GG  S+        I+                + 
Sbjct: 280 SVSPTSGQLLNIESITAVVIGGISLFGGRGSIMGPLFGALIVGVFTLGLRLAGADAQWTF 339

Query: 310 LKFDCSFNMRHTT 322
           L            
Sbjct: 340 LLIGALIIGAVAV 352


>gi|284992221|ref|YP_003410775.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160]
 gi|284065466|gb|ADB76404.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160]
          Length = 296

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 83/301 (27%), Gaps = 21/301 (6%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            IY + A G  I+  +  ++S        +GAYS   L         L +     I+   
Sbjct: 16  AIYALIALGFVIIFKASEVVSFTHGSLLLLGAYSIARLSEPL--GFLLAVLAGLAITAVA 73

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
            +++    +        I+  I++     IL+       G                V   
Sbjct: 74  ALVVERFIINRLRGAPVISLAIVTIGVDIILLTELIRRIGPD-----------ILNVPHP 122

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                     +         ++    L A+     + ++   A R   ++ +    +   
Sbjct: 123 WGGESVRIGGIGITQNRLIAMIVAGVLIAAFFAAFKYSSWGVAMRASAEDGETAALMGIR 182

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
                  A+ V+    G+A A F             ++  +      ILGG+ S      
Sbjct: 183 QGRVSALAWVVAGVLAGVA-ALFLVGSPTPGVSSAVYATALRAFPAAILGGLDSTGGALV 241

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
              ++     L  G           F             + +  V+L+R   L   +  +
Sbjct: 242 GGLLIGLAESLAAGYQEQLLFLGRGFGEVVP-------YVVMIAVLLVRPSGLFGTKELT 294

Query: 347 N 347
            
Sbjct: 295 R 295


>gi|15807114|ref|NP_295843.1| branched-chain amino acid ABC transporter permease [Deinococcus
           radiodurans R1]
 gi|6459918|gb|AAF11670.1|AE002047_3 branched-chain amino acid ABC transporter, permease protein
           [Deinococcus radiodurans R1]
          Length = 310

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 59/315 (18%), Positives = 118/315 (37%), Gaps = 45/315 (14%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL---------- 90
           ++ + ++   +    L   +   G LSL     YA+G Y   IL +              
Sbjct: 10  ALIVMMVQAGLLGLSLYFPL-QAGQLSLATPGFYALGGYVAAILLTNPAFAGLRDTLGNG 68

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              L    +A++ G  G+I+G+P+L+ RG YLA+AT+   +I Q + +    IT G  GI
Sbjct: 69  MFPLTWLAAALLCGVLGLILGIPALRLRGIYLALATIAFVQIMQILALNL-SITGGAIGI 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
           +   + +                       +   ++   +  L+      L R+ +  A+
Sbjct: 128 FAIPQAFGFDQ------------------PLQYLWLFGPLLLLTLLFARQLSRSRVGRAF 169

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             IR+++ A  ++       K+ AF + +   G+ GA  A   +  +     F  +I V+
Sbjct: 170 HAIREDELAADAMGINPTHYKVLAFVIGAVLAGLVGALSAPFLNTWNAKQGTFDASIAVL 229

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           + V++GG  ++       A+L  V E+   +                     +  + L +
Sbjct: 230 AFVLIGGSRNMWGPVVGGALLTAVPEVLRFLAD---------------WRLVINGLVLVV 274

Query: 331 VILMRSHSLLRLRTP 345
             L     ++     
Sbjct: 275 ASLYLPQGIVGALER 289


>gi|83749554|ref|ZP_00946541.1| LivH [Ralstonia solanacearum UW551]
 gi|83723790|gb|EAP70981.1| LivH [Ralstonia solanacearum UW551]
          Length = 294

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 108/315 (34%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y M + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGVPLPAMLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLTWMGLS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              L  W+++  + +  GA GM++    L+F      +  L+++     ++        G
Sbjct: 63  YLDLPYWVMLVAAPLAIGAVGMVIERTMLRFIYKLDHLYGLLLTLGVTLVIEGVFRAIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+  +      G T             F++   +  +V++    +  +    + +T +
Sbjct: 123 VSGLPYSTPELLSGAT----------DLGFMVLPNYRAWVVVASLTVCFATWFLIEKTKL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +   +  
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPLMVTLTYGFGVALAAFAGVLAAPVIQI--SPLMGQNMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+         L  +  L                  +    +T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSIITGLGLGVIEGLTKVF--------------YPQASSTVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + LV+L+R   L  
Sbjct: 277 IMALVLLVRPAGLFG 291


>gi|254250990|ref|ZP_04944308.1| inner-membrane translocator [Burkholderia dolosa AUO158]
 gi|124893599|gb|EAY67479.1| inner-membrane translocator [Burkholderia dolosa AUO158]
          Length = 294

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 105/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +GL  W ++ ++ +I GA G+ +    L++      +  L+++     ++        G
Sbjct: 63  YFGLPYWAMLVLAPLIVGAFGIAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSVYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 123 SSGQPYDVPSQLSGAT----------DLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +                     +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSIVTGLMLGVIEGFTRVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L+R   L  
Sbjct: 277 IMAIVLLIRPAGLFG 291


>gi|312883467|ref|ZP_07743192.1| ribose ABC transporter permease protein [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368690|gb|EFP96217.1| ribose ABC transporter permease protein [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 326

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 95/312 (30%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 28  LIALVFLIVVVSFLNPNFFTIDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 86

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   +         + + + +P +       G + G+   K +        + M+     
Sbjct: 87  LCG-AIAASMIAIEIPVLVAVPTALFAGALLGALSGIIIAKGKVQAFIATLVTMT----- 140

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G   +Y   R    G T  +    +      +   + ++ +++       
Sbjct: 141 -------LLRGVTMVYTDGRPISTGFTDTADTFSWFGTGYALGIPVPVWLMVIVFAAAWY 193

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +      T        +  N+ A       +   K+  +++      +AG   A+    
Sbjct: 194 LL----NHTRFGRYIYALGGNESATRLSGINVDRVKIGVYSLCGLLAALAGIIVASRLSS 249

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 250 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 309

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 310 AKAAVILLAVLV 321


>gi|312199655|ref|YP_004019716.1| inner-membrane translocator [Frankia sp. EuI1c]
 gi|311230991|gb|ADP83846.1| inner-membrane translocator [Frankia sp. EuI1c]
          Length = 751

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 53/306 (17%), Positives = 105/306 (34%), Gaps = 26/306 (8%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY- 79
           V   ++ L            +  +  L   +    + IV G  G +SL       +GA  
Sbjct: 327 VAGFVMLLAPMLFAPSDLRHAFMVPAL--ALIFLSIVIVTGYSGQVSLGVAGYAGLGALF 384

Query: 80  ----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
               +   +     L   L I V A++    G++ G P+++ RG  LA+ T  +  +   
Sbjct: 385 SLKLASGGMVGIPHLPGLLAILVGAILVAPIGLVTGYPAIRRRGLTLALVTFAVGAVVSR 444

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            + +   +                     +L     +   + + +   Y + L    L  
Sbjct: 445 FVFEQPSLAG-------------------NLTVNPLYIGGWELGDKSFYVIELLGLGLGM 485

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L R  +  A   +RDN     ++   +   KL AF +SS   G+ GA  A S   
Sbjct: 486 LAVRNLHRGRLGRALLAVRDNTGGAAAVGVDVRNLKLLAFTMSSVVAGLGGALLAYSASS 545

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            S D F+  ++++  + V++ G  S        A ++ +  +    +      +L     
Sbjct: 546 FSSDTFQPIQSLLWFTAVVVFGADSAVGAIVGAAFIVAIDVMAPSGSSTLAVGILALALG 605

Query: 316 FNMRHT 321
           +     
Sbjct: 606 WLPGGL 611



 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 71/250 (28%), Gaps = 9/250 (3%)

Query: 53  AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112
             GL +   + G+L+L       + AY Y  +   +GL +WL    + +        +G+
Sbjct: 21  GIGLLVTYRTNGVLNLAQGGIATLIAYVYREMAVVWGLPVWLS---AVLALAVLSPGIGV 77

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
              +     LA      +E     L          AGI+             +       
Sbjct: 78  LLERLVFRPLARRRASAAESLVASLGVMVLTLGMCAGIWGLGAQTDTPAVFPNKSVGIGG 137

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
               V     +  +L+        + L   RT      R + D+++     +        
Sbjct: 138 HHVGVDTISTLIVILVACVS----LGLLQSRTKFGRQMRAVVDDRQLAELSSVPADRVAA 193

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
           + +A  +   G  G   A         +      +   ++V+   + SL     A   + 
Sbjct: 194 AGWAFGTTLAGFTGILLAPRVSLSPYSLS--LVVLETFAVVVAARLVSLPAAVFAGLAIG 251

Query: 293 GVVELCCGMN 302
            +        
Sbjct: 252 ILQSELTQFT 261


>gi|148243551|ref|YP_001228708.1| Urea ABC transport, permease component UrtC [Synechococcus sp.
           RCC307]
 gi|147851861|emb|CAK29355.1| Urea ABC transport, permease component UrtC [Synechococcus sp.
           RCC307]
          Length = 375

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/321 (13%), Positives = 92/321 (28%), Gaps = 31/321 (9%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------GSRYGLS 91
           +  ++  + L   + A G+ ++ G  GLLSL   I +A+G Y   +         +    
Sbjct: 33  FRLNLLGRFLSLAIVALGIDLIWGFTGLLSLGQGIFFALGGYGAAMYLQLNSSSGQPNGI 92

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
                                P       +L  + L           + K +        
Sbjct: 93  PEFFSLYGVDRLPFFWEPFHNPLFTLIAIWLVPSLLAALLGNMVFRNRIKGVYFSILTQA 152

Query: 152 VADRLYFLGTTV-----------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
                +                   + + F         + + ++V   + FL+   + W
Sbjct: 153 ALLVFFNFFNGQQKLINGTNGLKTDVTQLFGQMVGSPEMQRYFFWVTCVLVFLAWLFVRW 212

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           + +    +    IRD++             K   FA++    G+ GA F      +SP  
Sbjct: 213 VVKGRFGDVLIAIRDDEPRLRFTGFNPTLFKTIVFAIAGGLAGIGGALFTVQSGIVSPQY 272

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
                +I ++  V +GG  +L        +++    L                 ++    
Sbjct: 273 MAVPFSIEMVIWVAVGGRGTLVGAIFGAVVIMYAKSLVSE--------------AWPQGW 318

Query: 321 TTLMVIALFLVILMRSHSLLR 341
             +      LV+ +    ++ 
Sbjct: 319 LFIQGGLFILVVTVLPEGVIG 339


>gi|145594348|ref|YP_001158645.1| inner-membrane translocator [Salinispora tropica CNB-440]
 gi|145303685|gb|ABP54267.1| inner-membrane translocator [Salinispora tropica CNB-440]
          Length = 293

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 98/307 (31%), Gaps = 23/307 (7%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +  +    Y + A GL+++ G L +++      Y +GA+   +L +  G+  W  + V  
Sbjct: 10  NGLVSGAFYALLALGLAVIFGMLRVVNFAHGAFYMLGAFGAYVLLAEAGVPFWAALVVVP 69

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +     GM +    +        +   +++     IL     +  G             G
Sbjct: 70  LALALLGMALERAFIHRLTRLDPLYNFLLTFGLTLILQDLVKLRYGVQSSPYEAPAGLRG 129

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                             +  +  ++L     +   +   L RT +    R   +  +  
Sbjct: 130 ----------SVDLGIFDFPTYRVFILGFAVAVCVGVWWALARTRVGMVVRAATERPELT 179

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +L   +       F    A  G+AG   A    R    +      I+V ++V++GG+ S
Sbjct: 180 RALGINVGRWITPVFGFGIALAGLAGVLAAP--MRAVNPLMGADLIIVVFAVVVIGGLGS 237

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +     A   +  V                    +F +   T++ I +  V+L R   L 
Sbjct: 238 IFGSVTAGFGIGMVQAWAEAYL-----------SAFPIVSQTIVFIVMAAVLLWRPAGLF 286

Query: 341 RLRTPSN 347
                + 
Sbjct: 287 GRAEAAA 293


>gi|121608074|ref|YP_995881.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121552714|gb|ABM56863.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 339

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/315 (12%), Positives = 98/315 (31%), Gaps = 18/315 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +     +       +          + ++     +  + A   + V+ + G + L+
Sbjct: 24  RQKLLAFASLLALMAFFSMASRNFLQTDNLVAILQATAVNGVLAIACTFVIITSG-IDLS 82

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                   A    ++ +  G  + L I  + +    CG+  G    K +           
Sbjct: 83  VGTLMTFCAVMTGVVLTHLGWPLPLGIAAAILTGALCGLTSGTLIAKLKIPPFIAT---- 138

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                   +    +  G + +    R  +   T            + +I  + +   +L 
Sbjct: 139 --------LGMMMLLKGLSLVISGTRPIYFNDTEGFSAISQDSLIAALIPALPIPNAVLI 190

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  ++ +  L L RT +      +  N++A       + F K+  + VS A  G+AG   
Sbjct: 191 LFVVAVAASLVLNRTILGRYTFALGSNEEAVRLSGVNVDFWKIVVYTVSGAICGIAGLLI 250

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A+  +   P + +  E   + ++VI      GG  ++        I+  +      ++  
Sbjct: 251 ASRLNSAQPALGQGYELDAIAAVVIGGTSLAGGTGTILGTIIGAFIMSVLTNGLRILSVA 310

Query: 305 YFNSLLKFDCSFNMR 319
                +       + 
Sbjct: 311 QEWQTVVTGVIIILA 325


>gi|212702298|ref|ZP_03310426.1| hypothetical protein DESPIG_00309 [Desulfovibrio piger ATCC 29098]
 gi|212674291|gb|EEB34774.1| hypothetical protein DESPIG_00309 [Desulfovibrio piger ATCC 29098]
          Length = 301

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 96/307 (31%), Gaps = 16/307 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L L++      + IGAY  + L     L+  L   V
Sbjct: 8   LLNGLAVGGIYALVALGYTMVYGVLKLINFAHGDLFTIGAYLGLTLLVSCNLAGVLPPVV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +       IM                     +  + ++     +       +      
Sbjct: 68  AVLAVFIMVGIMVAIIGCLLERAAYRPLRKAGRL--SAVVSALGASIFFQNAVMLVYGAR 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L   F      +        V+     L  ++  +++RT I  A R +  +Q 
Sbjct: 126 FYVYPDWLRPDFTVDLFGIAVPGVRLMVIAASVILMLALWAFIQRTRIGAAVRAVAIDQG 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       F +     G AG        +I   M  +S  +   +  ILGG+
Sbjct: 186 AARLMGINVDRIISLVFFIGPGLGGAAGLMVGIYYGQIDFTM-GWSYGLKAFTAAILGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L  +  L  G     +   + F               L L++++R   
Sbjct: 245 GNIPGAMIGGLLLGVIEALAAGYIAIAWKDAIAFT-------------VLILILIIRPTG 291

Query: 339 LLRLRTP 345
           +L  RT 
Sbjct: 292 ILGERTA 298


>gi|293603309|ref|ZP_06685737.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292818219|gb|EFF77272.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 293

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 53/300 (17%), Positives = 113/300 (37%), Gaps = 41/300 (13%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++ + +    + A  + + +   G+L++       IGAY+  +L   Y     + +    
Sbjct: 13  NLVLTLGTNALLALSIWLTLA-CGMLAMANAAFMGIGAYTAALLTMNYDAPFSVALAGGM 71

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
                   ++GLP+L+  G YLA+ATL   E+ +  ++  + IT G  G+    +L    
Sbjct: 72  AAPALVAALIGLPTLRLSGVYLAMATLGFGEVVRVTILNTESITGGALGLNGIPQLTQWW 131

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                                     ++    +   ++  +R + I  ++  IR ++ A 
Sbjct: 132 H-------------------------VVLAVVIVLFVLWRVRASKIGRSFDAIRGDETAA 166

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             +   +   K+ AF   +   G+AGA  A     I P+ + F   + ++++ ILGG+  
Sbjct: 167 GLMGIDVRANKMLAFVAGAMIAGLAGALNAHLTFFIGPNEYGFDRGVEILTMAILGGIGG 226

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L+     + I+  + EL  G                         + L +++L     + 
Sbjct: 227 LAGPVLGSFIITVLPELLRGFAD---------------LRLVANGVILVVIVLFLPQGIW 271


>gi|298292396|ref|YP_003694335.1| urea ABC transporter permease UrtB [Starkeya novella DSM 506]
 gi|296928907|gb|ADH89716.1| urea ABC transporter, permease protein UrtB [Starkeya novella DSM
           506]
          Length = 308

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/298 (11%), Positives = 90/298 (30%), Gaps = 17/298 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   ++V+ A GL+I+ G +G++++       +GAY        +   +  L      +
Sbjct: 22  LILFSVFVLMALGLAIIFGQMGVINMAHGEFMILGAYVTYFTSQFFLNHLPALFTAYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     I       F      +   +       +L  W      +           +G  
Sbjct: 82  AMILAFIASGALGMFIEWA--MIRRLYKRPLDTLLATWGLSLILQQVYRSVFGPREVGVE 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +      +  +  +I   +V+     ++  + + + +++     R +  N+    +
Sbjct: 140 LPEWMMGSLPLTDTIEVQINGLFVMGLTIAITIVVAVLMYKSSWGKQVRAVVQNRVMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           F +     G+AG+ F       +         +    +V+ GG  SL 
Sbjct: 200 VGINTEKVDRYTFGLGCGIAGVAGSAFTMIGS--TGPTSGQLYIVDTFLVVVFGGAQSLL 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
               +   +                               L ++ + +++++R   L 
Sbjct: 258 GTIASAFTISQAQSTLEFFLSGSMAK-------------VLTLLGVVIILMLRPQGLF 302


>gi|260575367|ref|ZP_05843366.1| inner-membrane translocator [Rhodobacter sp. SW2]
 gi|259022287|gb|EEW25584.1| inner-membrane translocator [Rhodobacter sp. SW2]
          Length = 707

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/316 (12%), Positives = 91/316 (28%), Gaps = 21/316 (6%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
           + I  L  VV        +        +     Q+  + +   GL++V+   G + L   
Sbjct: 31  NAIPFLALVVTVATFGTLIPGFFKPLSLQESTRQLGEFSLVVIGLTVVM-LGGGIDLAVG 89

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +A+ A++ V     + L +W+    S  +  A G I G      R        +    
Sbjct: 90  SIFALSAFAAVSCFFIFELPVWVAFAASLAVGAAFGAINGYLIGYLRLRAFLTTLVTFII 149

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                             IY    + F      S      +        + +   +    
Sbjct: 150 ---------------GRAIYDILVVAFASRVQMSSATSPIWDFIGDGTALGISVPVWAAF 194

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+    + L R+        +  ++++ ++    +       +  S      AG   A 
Sbjct: 195 GLAIVTHIALTRSRPGWHVLAVGGSRRSAYNAGIKVRRTVFLTYVFSGLTAATAGFLIAT 254

Query: 252 SRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                 P   +  E   + + V+      GG  S++K      I++ +      + +   
Sbjct: 255 RLSGAGPGTGQGLEIAALTAAVVGGNSLGGGRGSVAKGLMGAIIVLVMTNGLIRLGYGTG 314

Query: 307 NSLLKFDCSFNMRHTT 322
            + +       +  T 
Sbjct: 315 TNQMVLGLLLAVAVTI 330


>gi|78066030|ref|YP_368799.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia sp. 383]
 gi|77966775|gb|ABB08155.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia sp. 383]
          Length = 409

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 109/342 (31%), Gaps = 27/342 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +  +                     +     Q    V+ A   ++ +G+ GLLS  
Sbjct: 2   RNRTLAGVARWSLFAACVALPAWLWPHGAVLGYLAQTAALVVLALSYNLQLGTTGLLSFG 61

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +GA++     + +G  + LL  V  +     G   GL + +  G   A+ TL +
Sbjct: 62  HAAFAGLGAFAAAHWFNHFGGPLPLLPLVGGVAGAGFGFAAGLLATRRAGTAFAMITLGL 121

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            E              G  G+ +                   +        +  Y V+  
Sbjct: 122 GECVAAAAWSVPAWFGGIGGVPI------------DRASGTPWGGWHFGAPVQAYAVIAA 169

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
            C  SA  +  L RT ++     +RDN     +L T     +L+    +S F G+AG   
Sbjct: 170 WCLASAWAMHALTRTPLARLANAVRDNPVRVAALGTDPRRVRLAMVTCASFFAGVAGTLT 229

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
               +  +PD    + +  V+   ++GG  +    A   A+L  +  +  G++  +    
Sbjct: 230 LIDVEIATPDSVSMARSATVLIAAVIGGTGAFFGPAAGAAVLTALSIVVAGVSRAW---- 285

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                         + +   ++++     +  +        R
Sbjct: 286 -----------ALYLGVLFVVIVVAAPRGIAGIAQALAQAWR 316


>gi|83595055|ref|YP_428807.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
 gi|83577969|gb|ABC24520.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
          Length = 300

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 49/302 (16%), Positives = 98/302 (32%), Gaps = 20/302 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +Y M A GLS+V G L + +         G+Y+ V+L          ++   
Sbjct: 12  INAISLGSLYAMVAVGLSMVFGILRMTNFAHGDMMMAGSYATVLLTVAGLPFGVAVVCGV 71

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +      +   +     R     +  L+ S     +L     +    +   +    +  
Sbjct: 72  GVSVLVGVLAERIAYRPVR-GAPDVTLLLTSLALTYVLENLAILIFSSSPRAMPLPDWMG 130

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                     + F    + +        +        +  ++ RT      R   ++  A
Sbjct: 131 EV--------YSFSDGAITFTGIDLCATVLALCSLLGLGWFVTRTTTGLGMRAAAEDMAA 182

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +    ++AFA++S F G+AG  +AA    + P M  FS  +      I+GG  
Sbjct: 183 TALVGLNLNRLIVTAFAIASGFAGLAGVLWAAQSGVVDPGM-GFSPLLKAFVAAIVGGFG 241

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S++       +L  +  L  G                +     ++   L L +L R   L
Sbjct: 242 SIAGAVMGGYLLGALEILIVGFGPP----------EISPYRDAIVFALLILFLLFRPGGL 291

Query: 340 LR 341
           +R
Sbjct: 292 MR 293


>gi|269792250|ref|YP_003317154.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269099885|gb|ACZ18872.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 297

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 95/305 (31%), Gaps = 22/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A G ++V G L L++      + +GAY      + +       + +
Sbjct: 10  LFNALMLGSLYGLVAIGYTMVYGILRLINFAHGDVFMLGAYGVFWSFTLFNFPWSAAVVL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +     G+++   + +   D   I+ LI +      +     +        V      
Sbjct: 70  SVVAVAGIGIMVDRIAYRPLRDAPRISALISAIGVSFFIENVCIVVFSGIPRPVPSP--- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V        V +    L A +   + RT    A R I  + +
Sbjct: 127 -------EWLVRVVELGNVRILPLAVVVPVVSLLLVAFLFWVVYRTKPGLAMRAISKDIE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + SA    AG  ++    +I P M             ++GG+
Sbjct: 180 TTRLMGVKVDHIIAMTFGLGSALAAAAGIMWSLRYPQIHPLM-GIFPGFKAFIAAVIGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L  +  +            + F  + +        + L L++L +   
Sbjct: 239 GSIHGALVGGMMLGFIEIMI-----------VAFMPTLSGYRDAFAFVLLILILLFKPTG 287

Query: 339 LLRLR 343
           L+  +
Sbjct: 288 LMGEK 292


>gi|170699013|ref|ZP_02890070.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
 gi|170136049|gb|EDT04320.1| inner-membrane translocator [Burkholderia ambifaria IOP40-10]
          Length = 294

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 105/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL  W ++ ++ +I GA G+++    L++      +  L+++     ++        G
Sbjct: 63  YLGLPYWAMLALAPLIVGAFGILVERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 123 SSGQPYDVPSQLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +                     +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSIITGLLLGVIEGFTRVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L+R   L  
Sbjct: 277 IMAIVLLIRPAGLFG 291


>gi|149375698|ref|ZP_01893467.1| branched-chain amino acid ABC transporter,permease protein
           [Marinobacter algicola DG893]
 gi|149360100|gb|EDM48555.1| branched-chain amino acid ABC transporter,permease protein
           [Marinobacter algicola DG893]
          Length = 308

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 96/301 (31%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                ++V+ A GL+I+ G +G++++       +GAY+  +  S +   +  L       
Sbjct: 22  LSLFSVFVLMAMGLAIIFGQMGVINMAHGEFMILGAYTTYLTSSFFQSYLPGLFGGYFFF 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++             +   +       +L  W      +           +G  
Sbjct: 82  AIILAFLICAALGALVEW--LMIRHLYHRPLDTLLATWGLSLIMQQAYRSIFGAREVGVD 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +      +  V   I   +V++    ++ ++ L + R+      R +  N+    +
Sbjct: 140 LPEWMMGAFQVTDLVELPINGLFVMIIALSIAVAVYLLMYRSGWGKNVRAVVQNRPMAEA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +         + FA+     G+AGA F       +      +  +    +V+ GG  SL 
Sbjct: 200 VGINSAGIDRATFALGCGIAGIAGAAFTMIGS--TGPSSGQAYIVDTFLVVVFGGAQSLI 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++ +  ++++R   L+ L
Sbjct: 258 GTIISAFGISQAQSTMEFFLSGSMAK-------------VLTLLVVVGILMLRPEGLMAL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|110669067|ref|YP_658878.1| ABC-type branched-chain amino acid transport system, permease
           protein I [Haloquadratum walsbyi DSM 16790]
 gi|109626814|emb|CAJ53282.1| ABC-type branched-chain amino acid transport system, permease
           protein I [Haloquadratum walsbyi DSM 16790]
          Length = 294

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 99/306 (32%), Gaps = 19/306 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ +  +   ++   A G +++ G + +++L       +G YS       +        
Sbjct: 5   QFVVNGLLVGALFTAVAVGFALIWGVVDIINLAHGEMVMLGGYSSY-WILNFLTGDAEGS 63

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +I+    + +           L    +        ++     I             
Sbjct: 64  VTLFLITIPLVIGIVFVIGYALQRILVARVIGTDIFLTLLVTFGISI---AIQQLAIQAW 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 ++ L        + ++         +G   L+ ++ ++L+RT    A R +  N
Sbjct: 121 SANPRAIQILFTDPSLSVAGIVIPKMKLISFIGAIGLTVALYVFLQRTRTGRAIRAVSQN 180

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   +   +   +   F +SSA    AGAF A   +            +    IV+ G
Sbjct: 181 PEAAALVGIDVEHTRAVTFGISSAIASGAGAFIATILNI--QPQMGLIYTLKSFVIVVFG 238

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+  +     +L  V EL  G+    +   + F               L ++++++ 
Sbjct: 239 GVGSIPGVFIGGLMLGTVEELTAGLVSSQWTLAVSFS-------------LLIVLLIVKP 285

Query: 337 HSLLRL 342
             L   
Sbjct: 286 TGLFGE 291


>gi|284167399|ref|YP_003405677.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511]
 gi|284017054|gb|ADB63004.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511]
          Length = 289

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 94/301 (31%), Gaps = 27/301 (8%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
             +   + A GL+++ G L +++      Y +GAY   ++    G     L+    ++  
Sbjct: 15  LGMTLALIAAGLTLIFGMLDVINFAHGALYMLGAYFGAVIAVNLGSFWLALVLAPLLVGL 74

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
               I  L      G       L+       I      I  G+A       L        
Sbjct: 75  IGAAIEVLSLRPLYGRNPLYHILLTFGFAIMIQGAIVQIWGGQARRIAQPDLLTGT---- 130

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
                       + Y I+  +VL+    L A++ L + R+ +    R    + +   +L 
Sbjct: 131 -------LSIGSLNYPIYRLFVLVVSTVLIAAVWLAIDRSNLGILMRASAHDTEMVDALG 183

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
             +     S F   +   G+AG    ASR             I    IV++GG+ S    
Sbjct: 184 IDVSKVFTSVFVFGAVLAGLAGVLLGASRSV--NPGMGMGIIIEAFVIVVIGGLGSFRGA 241

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             A  ++  V      +     +                +   + +V++++ + L     
Sbjct: 242 VYAGLLIGLVTAYGALIAPTLTD--------------LFLFGLMAVVLMIKPNGLFGTTE 287

Query: 345 P 345
            
Sbjct: 288 A 288


>gi|126724488|ref|ZP_01740331.1| inner-membrane translocator [Rhodobacterales bacterium HTCC2150]
 gi|126705652|gb|EBA04742.1| inner-membrane translocator [Rhodobacterales bacterium HTCC2150]
          Length = 431

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 52/270 (19%), Positives = 99/270 (36%), Gaps = 21/270 (7%)

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
             PV  +++G    I+G  +L  R DYLAIATL +SEI   IL     +T G   +    
Sbjct: 162 AWPVGGLLAGGAAWIVGKITLGLRSDYLAIATLGISEIIVAILKHEDWMTRGVKNVNGIP 221

Query: 155 RLYFLGTTVRSLIRFFRF---------PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           R       +++   F  +           S V+ ++    + L +      +     ++ 
Sbjct: 222 RPVPYEVDLQNSDWFSGWAMSVGGDVTTLSSVVVKLSYAGLFLIVLVAVMYLSEKALKSP 281

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS- 264
                R IRDN+ +  ++   I    L  F + S  +G+AGA       +++P  ++   
Sbjct: 282 WGRMMRAIRDNEVSAAAMGKNITARHLQVFILGSVVVGIAGAMLTTLDGQLTPSAYQPLR 341

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIG-----------VVELCCGMNFYYFNSLLKFD 313
              ++  +VI+GG  +         ++             ++E+                
Sbjct: 342 FTFLIWVMVIVGGSGNNWGSILGGFLIWFFWIEAETLGRSLMEILTSGLDPTSGLRTHLL 401

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            S +      M I L +V+      L+  +
Sbjct: 402 NSADHMRLATMGIILLVVMRFSPRGLIPEK 431



 Score = 41.8 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 37/90 (41%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++       L +F+G  +S     ++    LI  + + G++I  G  GL ++  +   A+
Sbjct: 5   IVYFAIMAALLIFVGFYQSWNVSLTILNLCLISAIMSLGVNIQWGYAGLFNVGIMGFAAL 64

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           G  + V++        W +  +  + +   
Sbjct: 65  GGLAAVLISVPPVPEAWAVGGMGLLTAAIM 94


>gi|330815027|ref|YP_004358732.1| ABC branched-chain amino acid family transporter, inner membrane
           subunit [Burkholderia gladioli BSR3]
 gi|327367420|gb|AEA58776.1| ABC branched-chain amino acid family transporter, inner membrane
           subunit [Burkholderia gladioli BSR3]
          Length = 294

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/318 (12%), Positives = 106/318 (33%), Gaps = 26/318 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +  +     +    +    Y + + GL+++ G L +++      + +GA    +  +
Sbjct: 3   IFGIPLSAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLN 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            + L  W ++ ++ +++G  G+++    L++      +  L+++     ++        G
Sbjct: 63  YFSLPYWAMLVLAPLVTGLFGILIERSMLRWLYRLDHLYGLLLTFGITLVIEGVFRSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 123 ASGQPYDVPALLSGAT----------DLGFMYLPNYRAWVVVASLTVCLATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPLMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +                     +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSILTGLLLGVIEGFTRVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLRLRT 344
            + LV+L+R   L     
Sbjct: 277 IMALVLLVRPAGLFGKER 294


>gi|269104355|ref|ZP_06157051.1| ribose ABC transport system permease protein RbsC [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268160995|gb|EEZ39492.1| ribose ABC transport system permease protein RbsC [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 328

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 92/312 (29%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 30  LIALIFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 88

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +                 L+   +A+++GA    +    +        IATL+   + + 
Sbjct: 89  LCGAFAA--TLIAMEVPVLIAVPTALLAGAILGAISGVIIAKGKVQAFIATLVTMTLLRG 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + +        G                      F      Y + +   +  M  + A
Sbjct: 147 VTMVYTDGRPISTGFTDVA---------------DSFAWFGTGYAMGIPVPIWLMVIVFA 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 192 AAWYLLNHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGFLSALAGIIITSRLSS 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      ++   +  ++
Sbjct: 252 AQPTAGMGYELDAIAAVVLGGTSLAGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 311

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 312 AKAVVILLAVLV 323


>gi|149374921|ref|ZP_01892694.1| inner-membrane translocator [Marinobacter algicola DG893]
 gi|149360810|gb|EDM49261.1| inner-membrane translocator [Marinobacter algicola DG893]
          Length = 289

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 95/303 (31%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL+IV G L +++      Y +GAY    L +  G+  W  + +
Sbjct: 8   LLNSLDIGLLLFIIAVGLNIVFGVLNIINFAHGALYMLGAYLAFTLINIAGMPFWAALIL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +      +I+    L+F        +L+++     I+ +   +  G     V      
Sbjct: 68  APIGVAILAVIIDRVLLRFIYSRDVADSLLLTFAILLIINESVRMIWGSGIHVVQPP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +              +  +V++    L A +     RT +    R    ++ 
Sbjct: 125 -------DLLSGSVQLLGSSVATYSLFVIVIGLLLLAGLWYLFNRTRVGRIMRAAALDRD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L           FA  +    + G   A    R           I    +V++GG+
Sbjct: 178 MAEALCINTRLVVTGVFAFGAWLAAVGGVMAAP--MRALDPGMGDKIIIESFIVVVIGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         IL  +                         +  L  + + LV+L + + 
Sbjct: 236 GSFPGALLGAIILGLIHGFGGRY--------------LPEVNLLLPFVGMALVLLFKPNG 281

Query: 339 LLR 341
           ++ 
Sbjct: 282 MMG 284


>gi|114765329|ref|ZP_01444446.1| branched-chain amino acid ABC transporter, permease protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114542309|gb|EAU45338.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. HTCC2601]
          Length = 429

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 95/270 (35%), Gaps = 21/270 (7%)

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
             PV  +++     ++G  +L  R DYLAIATL ++EI   +L     +T G   +    
Sbjct: 160 AWPVGGLLAAGVAWVIGKTALGLRSDYLAIATLGIAEIIIALLKNEDWLTRGVKNVIGLP 219

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF---------LSASIILWLRRTA 205
           R       +++   F    +   +       + + + +         +   +      + 
Sbjct: 220 RPVPYEIDLQNDAGFVETAAGIGLDPTTASTIYVKLGYSVLFAVVLVVLLVLAQLALNSP 279

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS- 264
                R +RDN++A  ++   +    L  F + SA  G+AGA       +++P  ++   
Sbjct: 280 WGRMMRAVRDNEEAAEAMGKDVTARHLQIFILGSALCGIAGAMMTTLDGQLTPSSYQPLR 339

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR----- 319
              ++  +VI+GG  +         ++  +      M  +    +       +       
Sbjct: 340 YTFLIWVMVIVGGSGNNLGAVLGGFLIWFLWVQVEPMGQWLMGVITAGMADGSALKAHLL 399

Query: 320 ------HTTLMVIALFLVILMRSHSLLRLR 343
                     M + L LV+      LL  R
Sbjct: 400 GSVQHMRLLTMGVILLLVLRFAPRGLLPER 429



 Score = 37.9 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%)

Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
          G  +S      +    L+  + A G+++  G  GL ++  +   A+G  + V+       
Sbjct: 18 GVLQSWNSALIILNMGLVSAIMALGVNLQWGLAGLFNVGVMGFVALGGLAVVLTSVTPVP 77

Query: 91 SIWLLIPV 98
            W     
Sbjct: 78 EAWAAGGW 85


>gi|55377507|ref|YP_135357.1| branched-chain amino acid ABC transporter permease [Haloarcula
           marismortui ATCC 43049]
 gi|55230232|gb|AAV45651.1| branched-chain amino acid ABC transporter permease protein
           [Haloarcula marismortui ATCC 43049]
          Length = 314

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/318 (11%), Positives = 102/318 (32%), Gaps = 26/318 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL----- 94
            +      I  M A GL++++G L +L+L     +++GAY+ + +       I       
Sbjct: 13  LNGIQFGFILFMIASGLTVILGILDVLNLAHGELFSLGAYTAIGVFGFIIGIIGPPGGGV 72

Query: 95  ---LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
               + + A+++        L  +    + + +  +   +    +++ +  +        
Sbjct: 73  VGTAVFILAVLAAVLVTAAILLPVGTLFEAVFLRQIYDRDQVYQLVLTFALLLILLDVKK 132

Query: 152 VADRLYFLGTT--VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                  + T     ++          + Y  +  +V+L    + A +  +  RT     
Sbjct: 133 FIWGDSSIRTDAVYSAINAIPTSELVGLNYPTYNVFVILVGSAVVAGLFWFFERTKTGRI 192

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    +++   ++  +        FA+ +   G AGA                +  ++ 
Sbjct: 193 IRATAIDREMATAIGVSTDRVFTLVFALGAFLAGFAGAMAVPPTSA--TLEMGTNPLVLS 250

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             ++++GG+ SL        ++  +      +      +                   + 
Sbjct: 251 FVVIVIGGLGSLRGAFVGALLVGVIRSWMITLYPPGEIAAP--------------FAIMA 296

Query: 330 LVILMRSHSLLRLRTPSN 347
           L++L++   L      + 
Sbjct: 297 LILLVKPEGLFGTWGETA 314


>gi|260777266|ref|ZP_05886160.1| ribose ABC transport system permease protein RbsC [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260606932|gb|EEX33206.1| ribose ABC transport system permease protein RbsC [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 327

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALIFLIVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +     +  +       +    +   + +                + F  
Sbjct: 88  LCGAFAASLIALEVPVLVAVPTALFAGAALGAISGIIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F    +  I       V++       
Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWLMVIVFAAAWYL 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 196 L-----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGLLSALAGIIITSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLV 322


>gi|126734793|ref|ZP_01750539.1| Ribose ABC transporter, permease protein [Roseobacter sp. CCS2]
 gi|126715348|gb|EBA12213.1| Ribose ABC transporter, permease protein [Roseobacter sp. CCS2]
          Length = 362

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 91/313 (29%), Gaps = 11/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L     +   L      S   +  +  Q+ I  + A   S+V+ + G + L+     
Sbjct: 47  LFVLVASIAVFGLLLGSKFFSPFALTLILQQVQIVGIVAAAQSLVILTAG-IDLSVGAIA 105

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +        RYG+ +   + +        G I G      +         I++    
Sbjct: 106 VLSSVIMGQFTFRYGMPVEAAVALGLAFGTLIGSINGWLVAVMKLPPF-----IVTLGMW 160

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I++    + +    I   D              F     +         Y ++ M  + 
Sbjct: 161 QIVLAANFLYSANETIRSQDIEAEAPLLQLLGTTFKIGADADGRGGATFTYGVIAMVLIF 220

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A +   L +TA       + D+ +A       +    +S +AV+     +AG        
Sbjct: 221 AVLAYVLSQTAWGRHVYAVGDDPEAAQLSGVNVRSTLISVYAVTGFICAIAGWALIGRIG 280

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   +      + ++VI      GG  S+        I+                + 
Sbjct: 281 SVSPTSGQLLNIESITAVVIGGISLFGGRGSILGPLFGALIVGVFTLGLRLAGADAQWTF 340

Query: 310 LKFDCSFNMRHTT 322
           L          T 
Sbjct: 341 LLIGVLIIGAVTV 353


>gi|85705938|ref|ZP_01037034.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. 217]
 gi|85669526|gb|EAQ24391.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. 217]
          Length = 308

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 97/307 (31%), Gaps = 21/307 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   +  + A GLS+V G + ++++     + +GA     +         +   ++ ++
Sbjct: 15  AVTAAVLALTAVGLSLVFGVMRVVNIAHGEFFMLGAVLAWWIAQSVVGHPEIGFALALVV 74

Query: 103 SGACGMIMGLPSLKF---RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           +      + + +      R DY    T++ +     I+ +   +  G     VA      
Sbjct: 75  APLIVGALAVAADMTILKRLDYDPERTIVATIGLLYIIQQVTLMGYGPDARPVAAPFNTR 134

Query: 160 GTTVRSLIRFFRF---PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                       +       +    +   V+     L  ++ + + RT I    R  + +
Sbjct: 135 LAIPWFEHGPEGWAMIWPWGLGTTSYKLAVIGAAVVLLCAVWVLMTRTRIGLVMRATQAD 194

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +    +       F + +A   +AG      +      +      ++   +VI+G
Sbjct: 195 REMALAFGIPVERVYAGVFGLGAALAALAGVLIVPIQQA--HYLMGADPLLLSFIVVIIG 252

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ SL     A  ++     +                         L  + + LV++ R 
Sbjct: 253 GLGSLPGTVVAAILIGLSDGIISVFFSPTLAK-------------ILATLLVGLVLVFRP 299

Query: 337 HSLLRLR 343
             L   R
Sbjct: 300 QGLFGTR 306


>gi|213971398|ref|ZP_03399512.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas syringae pv. tomato T1]
 gi|213923841|gb|EEB57422.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Pseudomonas syringae pv. tomato T1]
          Length = 304

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/289 (11%), Positives = 81/289 (28%), Gaps = 3/289 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   +  +   +     +P+
Sbjct: 11  LVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPL 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +   A  +++                   + +    LI    ++          +   
Sbjct: 71  LMIAGFAAAIVVTSAYGYSIERVAYRPLRNSNRLIP--LISAIGMSIFLQNSVQLSQGSG 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L     F        +  Y  ++       ++       + S   R   ++ K
Sbjct: 129 NFAIPNLLPGSLSFGPGGSQEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRACAEDMK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           F V +A   +A    +     I+     F   +   +  +LGG+
Sbjct: 189 MANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVIN-PSAGFLVGLKAFTAAVLGGI 247

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            S+        +L         +    +  ++ F     +       I 
Sbjct: 248 GSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGIL 296


>gi|154245521|ref|YP_001416479.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154159606|gb|ABS66822.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 408

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 56/315 (17%), Positives = 111/315 (35%), Gaps = 34/315 (10%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG-- 89
                  + +  IQ+LI  +FA   S++ G  G+LS      + IGA++ +   + +   
Sbjct: 19  PAFLSAGLVNASIQMLIAALFASAFSLLCGQAGMLSFGHSAYFGIGAFATIHAMNAFNGA 78

Query: 90  --LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             L   LL  V  ++    G+  G  + K  G Y ++ TL ++E+   +    K +  G+
Sbjct: 79  GLLPTPLLPLVGGLLGLVSGIAAGWFATKRTGVYFSMITLALAELLHALAPHLKEVFGGE 138

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
           AG+       +  T                   + +YY+ L    L   ++     T + 
Sbjct: 139 AGVSAMRMPAWGFTF---------------GSNVEVYYLTLAWVLLCLLLLYLYTLTPVG 183

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +R+N      L   +    +  FAVS+ F G+AG   A + +  +  +     + 
Sbjct: 184 RLTLGLRENTHRLRFLGYNVHRLSVLVFAVSAMFSGVAGGLQALNIEAANYVVLDMQLSA 243

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            V+    +GG+      A   A++         +   +                    + 
Sbjct: 244 SVVLNSYIGGVKVFLGPAIGAALMSFFGYAVSDLTRSW---------------LLYQGVL 288

Query: 328 LFLVILMRSHSLLRL 342
             LV++     L+  
Sbjct: 289 FVLVMMFLPDGLVGE 303


>gi|99081117|ref|YP_613271.1| inner-membrane translocator [Ruegeria sp. TM1040]
 gi|99037397|gb|ABF64009.1| inner-membrane translocator [Ruegeria sp. TM1040]
          Length = 441

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 56/345 (16%), Positives = 117/345 (33%), Gaps = 22/345 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L+L     A     Y      +     + A  +   V     L        +I   
Sbjct: 98  ILLALVLGAATIAAAIYSYRVMAAGKARTLTLLAILIVGFVVYRAALDPGVEAIESINPA 157

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                   +GL + L  P+  +++     ++G  +L  R DYLAIATL ++EI   +L  
Sbjct: 158 LEG-NIGGFGLPVLLAWPLGGLLAAGVAWMIGKTALGLRSDYLAIATLGIAEIIIAVLKN 216

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF---------VIYEIFMYYVLLGM 190
              ++ G   +    R       +++   F    +++         +  ++    +   +
Sbjct: 217 EDWLSRGVKNVVGLPRPLPYEVDLQADPAFVNQAAAWGMDATTASTLYVKLGYALMFTVV 276

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +   +     ++      R IRDN+ A  ++   +    L  F + SA  G+AGA   
Sbjct: 277 LLVFLWMAQMALKSPWGRMMRAIRDNEVAANAMGKHVTRRHLQVFILGSAICGVAGAMMT 336

Query: 251 ASRDRISPDMFKFS-ENIIVISIVILGGMTSLSKIAKATAILIG-----------VVELC 298
               +++P  +       ++  +VI+GG  +         ++             ++EL 
Sbjct: 337 TLDSQLTPGTYNPLRFTFLIWVMVIVGGSGNNFGAVLGGLLVWFLWIKVEPMGVMLIELV 396

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                           S +      M + L LV+      L+  +
Sbjct: 397 TSGMSEDSGLRAHLLESASHMRLFTMGLVLLLVLRFSPRGLIPEK 441



 Score = 39.1 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 32/89 (35%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +V       F   + S     ++    LI  + A G+++  G  GL ++  +   
Sbjct: 13  FVGLLLVLEGTTNAFGVFSGSWNSALTILNMGLISAIMAIGVNLQWGFAGLFNVGIMGFT 72

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           A+G  + V+         W       +++
Sbjct: 73  ALGGLAVVLTSMPPTPGAWQAGGWQILLA 101


>gi|237736164|ref|ZP_04566645.1| ribose ABC transporter permease [Fusobacterium mortiferum ATCC
           9817]
 gi|229421717|gb|EEO36764.1| ribose ABC transporter permease [Fusobacterium mortiferum ATCC
           9817]
          Length = 315

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 88/312 (28%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +++ +++ +      +   I ++  Q  I  + A G+++V+   G + L+     A
Sbjct: 18  LIGLIIFAVIVSVLNPRFLTHANILNVLRQTSINSIIAIGMTLVI-LTGGIDLSVGSILA 76

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                        G +  L   V+  +    G   G    K +     +           
Sbjct: 77  FCGAVMA-SLLNAGHNPILAFIVTLALGLVFGFFNGFLVSKMKLQAFIVT---------- 125

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +      +        +        I +Y ++        
Sbjct: 126 -LVTMTFLRGATLVFTEGKPITVDDGGLLFENIGGGYLFD---IPIPIYIMIALFVAGHY 181

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++     T        I  N++A       +   K+  + +      +AG    +    
Sbjct: 182 LLM----HTKFGRYTYAIGGNEEATKLSGINVDKVKMWVYGLCGMLSALAGVILTSRLYS 237

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG+  ++  A    I+  +      +N   +  ++
Sbjct: 238 AQPTAGSGYELDAIAAVVLGGTSLAGGVGRVTGTALGALIIGVLGNALNLLNVSSYYQMM 297

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 298 IKAIVILIAVLI 309


>gi|328952053|ref|YP_004369387.1| ABC-type transporter, integral membrane subunit [Desulfobacca
           acetoxidans DSM 11109]
 gi|328452377|gb|AEB08206.1| ABC-type transporter, integral membrane subunit [Desulfobacca
           acetoxidans DSM 11109]
          Length = 302

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 91/306 (29%), Gaps = 15/306 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ +      +Y + A G S+V G L +++      + +GAY  +              
Sbjct: 6   QYLLNALQLGSVYALIALGYSMVYGILTMINFAHGDIFMVGAYLAMWAACFLLGLNLTFP 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +   +      +     L    + LA   L  +     ++         +         
Sbjct: 66  AMFVFLGALLFSMTLTAVLGVAIERLAYRPLRQAPRVSAVITALGVGLFLENFTLATIGP 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + ++I   +   + + +      +++    L   +   +R T    A R I  +
Sbjct: 126 E--PRQIPAIIPVQQLSWAGISFTNIQILIIIVAIGLMLLLDWVVRHTMTGMAMRAISYD 183

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    +   +       FA+ SA  G  G  +  +   + P M             ++G
Sbjct: 184 CQVAPLMGVPVNRVISLTFAIGSAIAGAGGLLYGLAYPVLDPYM-GIRIGWWAFISAVVG 242

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++        +L  V                    + +     +    L ++++ + 
Sbjct: 243 GIGNIRGAMLGGFLLGAVEIFT------------PVLLASSTYRDCVAFSMLLILLVFKP 290

Query: 337 HSLLRL 342
             +L  
Sbjct: 291 TGILGR 296


>gi|304394345|ref|ZP_07376268.1| ABC transporter, membrane spanning protein [Ahrensia sp. R2A130]
 gi|303293785|gb|EFL88162.1| ABC transporter, membrane spanning protein [Ahrensia sp. R2A130]
          Length = 354

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/322 (15%), Positives = 98/322 (30%), Gaps = 20/322 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGA--TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           L+ Y  ++ L+ +V  L++F  L      S   +  +  Q+ I  +     ++++ + G 
Sbjct: 37  LHSYPALVPLIVLVASLVVFGLLLGSKFFSPFALTLILQQVAIVGIVGAAQTLIILTAG- 95

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+      + +        RYGL   L +     +   CG I G+     R     + 
Sbjct: 96  IDLSVGAIMVLSSVVMGQFTFRYGLPPELAVICGLAVGAFCGFINGVLVAIVRLPPFIVT 155

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
             +   I     +     T     I  A  +               F     I      Y
Sbjct: 156 LGMWQIILATNFLYSSNETIRSQDIAAAAPILQF------------FGEKIRIGGAVFTY 203

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            ++G   L A +   L  TA       I D+ +A       +    +S +  +      A
Sbjct: 204 GVIGFVVLVAVLAYVLANTAWGRHVYAIGDDPEAAELSGIRVKRTLISVYVTAGLICAFA 263

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G         +SP   +F+    + ++VI      GG  S+  +     I+         
Sbjct: 264 GWALIGRIGSVSPTAGQFANIESITAVVIGGISLFGGRGSILGMLFGALIVGVFSLGLRL 323

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +      + L            
Sbjct: 324 IGTDPQWTYLLIGLLIISAVAV 345


>gi|86136424|ref|ZP_01055003.1| possible permease of ABC transporter [Roseobacter sp. MED193]
 gi|85827298|gb|EAQ47494.1| possible permease of ABC transporter [Roseobacter sp. MED193]
          Length = 352

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 56/283 (19%), Positives = 102/283 (36%), Gaps = 6/283 (2%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L+A V    L ++L       Y  ++ I   IY M    L ++ G  G+L       + +
Sbjct: 15  LMATVIVTGLLVWLMPMLISTYTLTVLI---IYGMLGLSLGLIWGFGGILCFGQAAFFGL 71

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAYSY I    +G S   +I    + +    ++  L       D       ++  +    
Sbjct: 72  GAYSYAIAAINFGESTLPMILAVLVPAVVAALLGALMFYGRLTDVYLGVITLVVTLILFK 131

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            +       G   +    RL                     I+    +YV   +  L   
Sbjct: 132 FVNSTA---GPQYVIGKARLGGFNGIPGFQTLNVPGRPEAYIWGDAYFYVCAVLLALVFV 188

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++  L R++       IR+N+     +   +   K   FA+ +A  G+AGA FA   + +
Sbjct: 189 LVTVLLRSSFGRVAVGIRENETRMSLMGYDVRARKTILFAIGAAIAGLAGALFANWGEIV 248

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           +P +F   ++  +I   I+GG+ +        A L  +  L  
Sbjct: 249 TPSLFSLGQSAEIIIWCIVGGLGTRLGPILGAAGLAYLKFLLG 291


>gi|91779098|ref|YP_554306.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91691758|gb|ABE34956.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 289

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 96/312 (30%), Gaps = 26/312 (8%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            + I S  +   +Y + A G++I+  +  +++      + +GA++ ++    +G S    
Sbjct: 3   SQLIVSGVVAGSLYALIALGMTILYRATTVVNFCHGEFFMLGAFAAMVAQRSFGFSYAGS 62

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  S ++  A G+ +    ++       I+  +M+     ++        G+    +   
Sbjct: 63  VVFSCVLLFAIGLAVERALMRPLQRAPHISLAMMTVALSYLMKGVVRFFYGREVDPLPPM 122

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           +     +  S+                    +     + A   ++ + T      +    
Sbjct: 123 IGGDQISFGSISVMPDD-----------LLTMGFTLVVVAGFFVFFKATQAGKVIQAASQ 171

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
             +    +   +   +   +   +     AG   A     +       +  +   + + L
Sbjct: 172 TPRGASLVGINVPMLRNLMWGTGALLGAAAGILIAP--TTLVYPDMGATMLMHAFAAMTL 229

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  SL      + +L  V  +  G        +                + +  V+++R
Sbjct: 230 GGFGSLPGAVLGSIVLGVVENVMGGFVSSSLIDVTD-------------YLVIIAVLIVR 276

Query: 336 SHSLLRLRTPSN 347
              LL     S 
Sbjct: 277 PQGLLGESRISR 288


>gi|91975620|ref|YP_568279.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91682076|gb|ABE38378.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 328

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 62/333 (18%), Positives = 122/333 (36%), Gaps = 23/333 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            ++  LL           Y   +    L+YV  A   +IV G  G +SL   +    GA 
Sbjct: 14  WLWGALLLTAALPLTLNSYYLHILTIALVYVALASAWNIVGGMAGQISLAHSLFIGTGAM 73

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
               L  + G+++W  + +SA I+G  G I+     +F+  +L+   + ++      ++ 
Sbjct: 74  LSTALLVKLGINMWAGLVISAAIAGLLGAIIAWIDFRFQLGHLSFVLITLAFAEMAAIVV 133

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                 G A   +  R        +                   ++V+LG+    A I +
Sbjct: 134 EGWEFLGGASGLLLPRDTGDVWAFQ------------FGGVRGAFWVMLGLAATIALINV 181

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  + +    RTIRDN+KA  ++   ++  K+ A  +S+    + G  +        P 
Sbjct: 182 AILNSPLGYYLRTIRDNEKAAQAIGVDVLRHKMIAMTISAVLTSIVGTCYVRYLTFADPY 241

Query: 260 -MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            +      I ++    +GG+      A    +L+ + E+  G          +   +   
Sbjct: 242 LLASPLITIEIVLFATVGGLGRAFGPALGALLLVPLGEVLRG----------QLGGAVPG 291

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            H  +  + + +VIL+    LL L        R
Sbjct: 292 LHYFIYGVVVIVVILVTPRGLLPLFEKLVRRRR 324


>gi|269127071|ref|YP_003300441.1| inner-membrane translocator [Thermomonospora curvata DSM 43183]
 gi|268312029|gb|ACY98403.1| inner-membrane translocator [Thermomonospora curvata DSM 43183]
          Length = 320

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 101/320 (31%), Gaps = 29/320 (9%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL------- 90
                     IY + A G ++V G L L++      + IG  + +++ +           
Sbjct: 8   NTVDGLSLGAIYALVALGYTMVYGVLRLINFAHSEIFLIGTCASLVVVNAVAPSAPLSGV 67

Query: 91  ----SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
                + L+  V+ + SGA  M +   + +    + A     +       L   +     
Sbjct: 68  ALLGIVLLMAAVAMVASGAGAMALEFVAYRPLRKHGASRLAALISAIGASLFLQQFFALF 127

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM----YYVLLGMCFLSASIILWLR 202
                           V+    F      F I  + +      V +    +   +  ++ 
Sbjct: 128 VIPWLFDKPKEGGRLPVQPEQHFVDRHDVFSIGGVGVANDKLIVFIAAILMMVVLDQFVN 187

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           RT +    R+   + +    +   I     + FA+  A  G+A A +    +  +  M  
Sbjct: 188 RTKLGRGIRSTAQDPETAVLMGVNIDRIVTATFAIGGAMAGVAAALYVLRFEE-TFFMVG 246

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F   I   +  +LGG+ ++        +L  +      +    +  ++ F          
Sbjct: 247 FLLGIKAFTAAVLGGIGNIRGALTGGFVLGLLEMYGSMVFGSAWKDVVAF---------- 296

Query: 323 LMVIALFLVILMRSHSLLRL 342
              + L LV++ R   +L  
Sbjct: 297 ---VILILVLMFRPTGILGE 313


>gi|209551903|ref|YP_002283820.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209537659|gb|ACI57594.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 340

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/323 (11%), Positives = 94/323 (29%), Gaps = 23/323 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R++  +  + +  ++             + +    + +QI I  + A G++ V+   G 
Sbjct: 21  IRISMKEAGVAIALILILAFFSATAPYFATPENFLKIFVQIAINTVLAAGMTFVILVGG- 79

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+       +      S W  I ++ + S   G  +G              
Sbjct: 80  IDLSVGSLLALCTVIGATIMINPAFSPWQAIVLACLASMGTGAALGAV----------NG 129

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            +       + ++    +        V      +    +  + F       +   IF+  
Sbjct: 130 WICEKWKLPSFIVTLGMLNVASGLARVVSDNSTITGLPQPFVDFGNLIFWGIFPSIFLIA 189

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +++ +           R T        I  N++A           K++ F +S    G+A
Sbjct: 190 IVVVLIGWFVL-----RYTVFGRFVFAIGTNEEAVRLSGHQPKRYKIAVFTISGLTAGIA 244

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCC 299
              +    + +   +      +  I+ VI+GG        S+        IL  +     
Sbjct: 245 AMVYLLRLN-VGSPVAGIGYELNAIAAVIIGGTSLSGGKGSIIGTLVGACILQVLSTGLQ 303

Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322
            +        +       +    
Sbjct: 304 LLGADDNIKPIVIGAVIVLAVIL 326


>gi|13488196|ref|NP_085619.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14027868|dbj|BAB54460.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 336

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/311 (16%), Positives = 98/311 (31%), Gaps = 32/311 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL--GSRYGLSIWLLI 96
           + +       Y+ FA GL++V G + +++      + IGAY+  +        +      
Sbjct: 53  VLNCLSLTSFYLCFALGLALVFGVMRIINFAHGEFFMIGAYATYLCVATLAPQIGGPSAW 112

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE---IFQNILIKWKPITNGKAGIYVA 153
            V A+++     ++G    +     LA   L +         +L        G  G+ ++
Sbjct: 113 LVGAIVAAGITGLLGAVLYRTVVVPLADKPLAIFIATLALSYVLQTIVVQIFGPVGLSIS 172

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             L  +                  I       V++    LS  + ++L RT      R +
Sbjct: 173 PPLRGV------------VSVGGAILPASRAMVIVAAAALSIGLWIYLMRTESGRRIRAV 220

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             N +                  + S   G+ GA       +ISP M   +       I+
Sbjct: 221 AQNPRGALLQGIKTRNVGNLTLIIGSGIAGICGAAMGP-ISQISPYMGGPALW-KAFIII 278

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           I+GG+ ++     A AI   +  L        F +L                  +  V+ 
Sbjct: 279 IVGGIGNVWGAVAAAAIFGVLDTLMSQFGGGRFLALTS-------------AAIMLFVLS 325

Query: 334 MRSHSLLRLRT 344
           ++   L   + 
Sbjct: 326 VKPSGLFGEKE 336


>gi|294101169|ref|YP_003553027.1| inner-membrane translocator [Aminobacterium colombiense DSM 12261]
 gi|293616149|gb|ADE56303.1| inner-membrane translocator [Aminobacterium colombiense DSM 12261]
          Length = 289

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 85/303 (28%), Gaps = 24/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G S+V   L   +        IG Y         G++IWL   +
Sbjct: 4   VINGLSLGSVYALIAVGYSLVYSVLLFSNFAHGGFLVIGGYICYGALKSMGVNIWLAGML 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S   +G    +    + K   +   +   ++       ++          G + A     
Sbjct: 64  SLAGAGIAAALTERIAYKPIRERTNVTLYLLIASMGMSIVIENIFVIVAGGRFRALPPVI 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V+                 F     L        + L+L RT    A R    + +
Sbjct: 124 PTYPVQ--------LFGLATTSAFDLLSFLIALIALGCLQLFLSRTKWGLAIRAAACDLR 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F  + A   + G F +      +      +  I      ++GG+
Sbjct: 176 TAGLMGVNVNLLISIVFFTAGALAAIGGIFLSVRY---TLYPQLGAITIKAFVAAVIGGL 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL      + IL     L  G                +     ++   L + +L++   
Sbjct: 233 GSLPGAVVGSLILGLAEMLAAGFIS-------------SQMRDLVVFSLLVITLLIKPSG 279

Query: 339 LLR 341
           L  
Sbjct: 280 LFG 282


>gi|172063977|ref|YP_001811628.1| monosaccharide-transporting ATPase [Burkholderia ambifaria MC40-6]
 gi|171996494|gb|ACB67412.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MC40-6]
          Length = 347

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/326 (12%), Positives = 97/326 (29%), Gaps = 18/326 (5%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           + F     +   +     V+                 + S+     +  + A   + V+ 
Sbjct: 25  ARFFNPAARQKLLAFASLVLLIAFFSFASPNFLDVDNLVSILQATAVNGVLAVACTYVII 84

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           + G + L+        A    ++ +++G+ + L I  +       G + G    K +   
Sbjct: 85  TSG-IDLSVGTLMTFCAVMAGVVLTKWGMPLPLGILAALSFGALSGSVSGFVIAKMKVPP 143

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                           +    +  G + +    R  +   T              +I  +
Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQDSLIGSLIPAL 191

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +   +L +  ++    + L RT        +  N++A       +   K++ +  S A 
Sbjct: 192 PIPNAVLILFLVAIGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAV 251

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+AG   A+  +   P + +  E   + ++VI      GG  S+        I+  +  
Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTN 311

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               M+       +       +    
Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYV 337


>gi|126740266|ref|ZP_01755955.1| inner-membrane translocator [Roseobacter sp. SK209-2-6]
 gi|126718721|gb|EBA15434.1| inner-membrane translocator [Roseobacter sp. SK209-2-6]
          Length = 345

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 98/283 (34%), Gaps = 6/283 (2%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            + ++    +  ++       Y  ++ I   +Y M    L ++ G  G+L       + +
Sbjct: 9   AITIILVTAILTWVMPLIISTYTLTVLI---VYGMLGLSLGLIWGFGGILCFGQAAFFGL 65

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+Y I     G S   +I    + +    ++  +       D       ++  +    
Sbjct: 66  GAYTYAIAAINIGESTVPMILAVLVPAVFAALLGAMMFYGRLTDVYLGVITLVVTLILFK 125

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            I       G   +    RL                     I+    +YV   +  L   
Sbjct: 126 FINSTA---GPQYVIGDARLGGFNGIPGFQTLNIPGRPDDYIWGDSYFYVCAILLALVFF 182

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++  L R++       IR+N+     +   +   K   FA  +A  G+AGA FA   + +
Sbjct: 183 LVSALLRSSFGRVAVGIRENETRISLMGYDVRARKTVLFAAGAAIAGLAGALFANWSEIV 242

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           +P +F   ++  +I   I+GG+ +        A L  +  L  
Sbjct: 243 TPSLFSLGQSAEIIIWCIVGGLGTRFGPVLGAAGLAYLKFLLG 285


>gi|220903751|ref|YP_002479063.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868050|gb|ACL48385.1| inner-membrane translocator [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 301

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 93/307 (30%), Gaps = 16/307 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L L++      + IGAY  + L     LS  L   V
Sbjct: 8   LLNGLAVGGIYALVALGYTMVYGVLKLINFAHGDLFTIGAYLGLTLLVSCNLSGMLNPVV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +       ++                     +  + ++     +       +      
Sbjct: 68  AVLAVFVMVALLVAIIGFLLERTAYRPLRNAGRL--SAVVSALGASIFFQNAVMLIYGAR 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L   F      +        V+     L   +  +++R+    A R +  +  
Sbjct: 126 FYVYPDYLRPDFTVHLFGLAVPGVRLLVIAASVILMLGLWAFIQRSRTGAAIRAVAIDPG 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       F +     G AG        +I   M  +S  +   +  ILGG+
Sbjct: 186 AAQLMGINVDRIIGLVFLIGPGLGGAAGLMVGIYYGQIDFTM-GWSYGLKAFTAAILGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L  +  L  G     +   + F               L L++++R   
Sbjct: 245 GNIPGAMIGGLLLGVIEALAAGYIAIAWKDAIAF-------------FVLILILIIRPTG 291

Query: 339 LLRLRTP 345
           +L  RT 
Sbjct: 292 ILGERTA 298


>gi|326797199|ref|YP_004315019.1| ABC-type transporter integral membrane subunit [Marinomonas
           mediterranea MMB-1]
 gi|326547963|gb|ADZ93183.1| ABC-type transporter, integral membrane subunit [Marinomonas
           mediterranea MMB-1]
          Length = 361

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 77/313 (24%), Gaps = 18/313 (5%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
              L +L +       +          +  +  Q+ I  +     ++++ + G + L+  
Sbjct: 50  AAPLIVLLLAIFGFSLIVGDRFLHPFNLSLVLQQVTIIGVIGIAQTLIILTAG-IDLSVG 108

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               + +     +   YG+   L + +        G I G    + +           + 
Sbjct: 109 AIMVLSSVVMGRMAIDYGIDPSLALLIGIATGAITGFINGTLITRLKLPPFIATLGSWNV 168

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            F   L             Y   +         +         +  ++   + Y  + M 
Sbjct: 169 FFALNL------------WYSKSQTIRSQEIAANAPLLQWLGETINVFGARLTYGSILML 216

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L   I   L  TA         D+  A            LS + ++     +       
Sbjct: 217 LLFVVIWYALNWTAWGRHVYATGDDPAAAKLAGIRTDRVLLSVYILAGVICAIGAWVLIG 276

Query: 252 SRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
               +SP     +    + ++VI      GG  S+        I+               
Sbjct: 277 RIGSVSPQAGYTTNLDSITAVVIGGCSLFGGRGSIFGTLVGALIVGVFRNGLALAGVDVL 336

Query: 307 NSLLKFDCSFNMR 319
                      + 
Sbjct: 337 WQEFTVGILIIVA 349


>gi|220920117|ref|YP_002495418.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219944723|gb|ACL55115.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 291

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 89/305 (29%), Gaps = 20/305 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G +++ G  G+L+L+        A       S  GL  +    V
Sbjct: 7   LIDGFAISALYALGATGFTLIFGVSGVLNLSHGALMVTAAVVAWAASSELGLGSYAGAAV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +     +      +K         +  +    + I I    +  G         L+ 
Sbjct: 67  GVAVCTLLTLATYGIVVKP-----IDRSKAIPAEEKEIFILTGTLLWGIMIQEFIAYLFT 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I       + V       +  +      A + L + RT           N +
Sbjct: 122 SNAKTVMPIVEGVVTIAGVRTPWNQIFTAVVCWGTIALLWLLVNRTRTGKVVLAASMNPR 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +    ++ + +     G+AG          S  +   +      SIV+LGG+
Sbjct: 182 GVTLLGFELSKIYVAIWLIYGVLAGIAGVLLGQFLGVSSYSVGPLT--ASAFSIVVLGGL 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+S    A  ++  +  +   +                   T   ++ L  V+ +R   
Sbjct: 240 GSVSGSLIAAYVVGYLETITAYLIS-------------PAYRTIPALLLLVAVMYVRPQG 286

Query: 339 LLRLR 343
           LL  R
Sbjct: 287 LLGRR 291


>gi|298293188|ref|YP_003695127.1| inner-membrane translocator [Starkeya novella DSM 506]
 gi|296929699|gb|ADH90508.1| inner-membrane translocator [Starkeya novella DSM 506]
          Length = 354

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 54/319 (16%), Positives = 112/319 (35%), Gaps = 3/319 (0%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
              +L+   L    S  Y     +    ++  A GLS++ G  G LS      + +  Y 
Sbjct: 27  FLVVLIGACLYPQFSDGYTVGNTVYFFTWIFMALGLSLIWGYGGSLSFGQTAFFGLAGYG 86

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI-MSEIFQNILIK 139
           Y IL   +G +    +    +      +   L         ++   L  ++     +L +
Sbjct: 87  YGILTINFGAAYGFTLVALVLAVAFAALFAALLGYFLFFGRISGVFLGIVTLSITLVLER 146

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE--IFMYYVLLGMCFLSASI 197
           +   T G      + RL               +P   ++    I +YYV+LG+  +    
Sbjct: 147 FMAQTAGPEWRIGSARLNGFNGMSGMPPLTIPWPGGDIVLFPDIGLYYVVLGLLVVVYLG 206

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L  ++  N    IR+N +    L   I   +L  F + +A  G++G  + +    I+
Sbjct: 207 LRILVNSSFGNILVAIRENPERAEMLGYDIRKYQLGTFVIGAALAGLSGVLYTSWGQYIT 266

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P     +   + I  V +GG + ++     T  ++ V ++       Y   ++       
Sbjct: 267 PSSMGMTAAALPIVWVAVGGRSDITTTLVGTLTVLAVFQMLTIYGSQYALVVMGALLVLT 326

Query: 318 MRHTTLMVIALFLVILMRS 336
           +      ++     +L R 
Sbjct: 327 VLLAPRGLVFALARLLSRP 345


>gi|110637662|ref|YP_677869.1| branched-chain amino acid ABC transporter permease [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110280343|gb|ABG58529.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Cytophaga hutchinsonii ATCC 33406]
          Length = 363

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/341 (13%), Positives = 103/341 (30%), Gaps = 16/341 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            N       +L  V+ +++ +            S+  +   + + A G+ ++ G  G+LS
Sbjct: 5   FNSNSLFYIILIGVFLIIMPIGNMLGFVSNNTISLWGRYFCFAIAALGVDLIWGYSGVLS 64

Query: 68  LNCVIAYAIGAYSYVILGS--------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           +   + + +G Y+  +                  +   V  + +          S     
Sbjct: 65  MCQAVFFCLGGYAIAMHMLLVAGGEDPSGIPDFMVWNQVDVLPAFWIPFHSFGLSFLLAL 124

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT--------VRSLIRFFR 171
               I   I         IK   +      + +A  L FL           +        
Sbjct: 125 LIPGIFAFIFGYFVFRSRIKGVYLAIITQALALAMWLIFLRNETMLGGTNGLTGFKTLLG 184

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F  S    ++ +Y V   + F       WL  +        IRD++         ++  K
Sbjct: 185 FSLSSPSTKLGLYIVSFLVMFGLFLFCKWLVNSKFGKVLVAIRDSESRVSYTAYNVVNYK 244

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           L+ F +++    + G  +      I+P       ++ ++  V LGG   L        ++
Sbjct: 245 LAVFVIAAVVAAIGGMLYVPQTGIITPGRMDVKASVEMVMWVALGGRGRLKGAIIGALLV 304

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
             +  +C  M    +  +L       +         L  ++
Sbjct: 305 NYLYSVCTSMFPESWLYILGVLFILTVLFFEKGFWGLIEML 345


>gi|238025739|ref|YP_002909970.1| ABC branched-chain amino acid family transporter, inner membrane
           subunit [Burkholderia glumae BGR1]
 gi|237874933|gb|ACR27266.1| ABC branched-chain amino acid family transporter, inner membrane
           subunit [Burkholderia glumae BGR1]
          Length = 294

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/318 (13%), Positives = 105/318 (33%), Gaps = 26/318 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +  +     +    +    Y + + GL+++ G L +++      + +GA    +   
Sbjct: 3   IFGIPLSAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLH 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            + L  W ++ V+ ++ G+ G+++    L++      +  L+++     ++        G
Sbjct: 63  YFSLPYWAMLVVAPLVVGSFGILIERTMLRWLYRLDHLYGLLLTFGITLVVEGVFRSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 123 ASGQPYDVPALLAGAT----------DLGFMYLPNYRAWVVVASLAVCLATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   DN K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTDNPKLVEAFGVNVPLMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +                     +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSIVTGLLLGVIEGFTRVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLRLRT 344
            + LV+L+R   L     
Sbjct: 277 IMALVLLVRPAGLFGKER 294


>gi|148252244|ref|YP_001236829.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. BTAi1]
 gi|146404417|gb|ABQ32923.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 308

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 91/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   +YV+ A GL+I+ G +G++++       +GAY   +  + +   +  L P    +
Sbjct: 22  LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTWMTSNAFQSFLPALFPGYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           + A   I              +   +       +L  W      +           +G  
Sbjct: 82  AMALAFIASGSLGMLVEWA--MIRRLYKRPLDTLLATWGLSLILQQAYRSVFGAREVGVE 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +      +  +   I   +V+     ++  +   L  +      R +  N+    +
Sbjct: 140 LPEWMMGSWQATDAIQIPINGMFVMCLTILITIVVAYVLFLSRWGRQVRAVVQNRVMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           F +     G+AG+ F       +         +    +V+ GG  SL 
Sbjct: 200 VGINTEKVDRYTFGLGCGIAGVAGSAFTMIGS--TGPTAGQLYIVDTFLVVVFGGAASLL 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++A+  +++MR   L  L
Sbjct: 258 GTIASAFTISQAQSTMEFFMSGSMAK-------------VLTLLAIVAILMMRPQGLFAL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|323142364|ref|ZP_08077196.1| ribose ABC transporter permease protein [Phascolarctobacterium sp.
           YIT 12067]
 gi|322413248|gb|EFY04135.1| ribose ABC transporter permease protein [Phascolarctobacterium sp.
           YIT 12067]
          Length = 309

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 94/312 (30%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V  +++     +      + ++  Q+ I  + ++G++ V+   G + L+     A
Sbjct: 13  IIGLIVLFVVISCLNSSFIDPSNLKNLLRQVSINALISFGMTFVI-LTGGIDLSVGSILA 71

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +             ++ ++    + +                 Y  +A  I +     
Sbjct: 72  LSSALMGSFIKGGMDPVFGIVLACLIGAALGS------VNGLVITYGKVAPFIATLATMT 125

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I      +                G  + SL    RF      Y   +    + M  +  
Sbjct: 126 IFRGLTLVY-------------TNGNPISSLSEDDRFLEFGQGYVAGLPVPAIMMLIMFF 172

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L +T +      +  N+K  F     I   K+ A+ V+    GMAGA   +  + 
Sbjct: 173 ILWFILHKTPLGRKTYAVGGNEKVSFIAGIKINRIKIFAYTVTGFLCGMAGAILTSRLNS 232

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +N   F   +
Sbjct: 233 AQPTAGTGYELDAIAAVVLGGTSLSGGKGRIFGTIIGALIIGTLNNGLNILNVSSFYQQV 292

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 293 VKGIVILLAVLM 304


>gi|150377452|ref|YP_001314047.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
 gi|150031999|gb|ABR64114.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
          Length = 296

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 89/305 (29%), Gaps = 22/305 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++  +      Y + A GL I+ G L L++        +  Y+  +        I + +
Sbjct: 6   QFVIDVLSLGGAYALMALGLVIIYGILRLVNFAYGELIMVAGYTMFLASGSGLPWIVMAV 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +  ++   G++    + +        A LI S  F N+L     +        V    
Sbjct: 66  L-AVGMAIVFGILTDYVAFRPVRAKSVTAVLITSFAFSNLLQNAALLFISPRPRNVPLP- 123

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     I          I  +     +     L A +   +RRT +  A R    N
Sbjct: 124 ---------DIFSQTVSIGGAITPVRNLITIAASILLLAGVAFLMRRTTLGIAMRAAATN 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 L         SAFA+S    G+ G  +      +          ++     ++G
Sbjct: 175 FTMARMLGVPANLIISSAFALSGFLAGVVGILWIGRIGTV-VPGVGLEPLLVAFIATVIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM SL        +L  +                                 + L++L R 
Sbjct: 234 GMRSLPGAVVGGFLLALIDTTLNY----------TLSQDLLKFRDAFTFSLVILILLWRP 283

Query: 337 HSLLR 341
             L+R
Sbjct: 284 EGLIR 288


>gi|295678151|ref|YP_003606675.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295437994|gb|ADG17164.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 294

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/316 (14%), Positives = 105/316 (33%), Gaps = 26/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGVPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +GL  W+++ ++ +I G  G+ +    L++      +  L+++     ++        G
Sbjct: 63  YFGLPYWVMLVLAPLIVGLVGVAIERSMLRWLYKLDHLYGLLLTFGITLVIEGVFHSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +       + +T +
Sbjct: 123 SSGQPYDVPSALSGAT----------NLGFMYLPNYRAWVVVASLIVCFVTWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPLMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  V  L                  +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSIMGSILTGLMLGVVEGLTRVY--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLRL 342
            + LV+L+R   L   
Sbjct: 277 IMALVLLVRPAGLFGR 292


>gi|227822612|ref|YP_002826584.1| branched-chain amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
 gi|227341613|gb|ACP25831.1| branched-chain amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 328

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 70/342 (20%), Positives = 142/342 (41%), Gaps = 22/342 (6%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M    +   K    +  L  +   +  L     ++  Y       + +  + + G+ I  
Sbjct: 1   MRHAPIATLKIASAVVFLLALLVAVPLLINATGRTDLYYT--LTSVALLSIISAGVWITF 58

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
             +G +++       +G Y   IL   YG+S WL +P++ +   A  +++GLP L+ RG 
Sbjct: 59  -YIGRINIGQGAYALMGGYVSAILVMNYGMSFWLTLPLAGLFCAAASVLIGLPILRLRGV 117

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           Y A+ +L+++E+ + + +    ITNG +GI        L     +LI  F   ++     
Sbjct: 118 YFAMVSLVLTEVARLLALALP-ITNGASGIVSIPLPSRLSLFGLTLIPDF---ATLANPR 173

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y   + +  L    +  L  + I    ++++ N++   S+   I + ++ A+A+SS 
Sbjct: 174 LSFYIASVLLMALCFLGLYRLAHSRIGQLCQSLQQNEELASSIGVNIAYLRVVAYALSSF 233

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             G+ GA FA+    I P  F  ++++  +    LGG+  +      T +L    +L   
Sbjct: 234 LGGVGGAMFASISQSIYPSSFTVADSVNFMLNCFLGGLGYVLGPMLGTFVLYFGWDLL-- 291

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                                 +   AL +++L+  + LL L
Sbjct: 292 -------------FQTGEFQLLIFSTALIVLMLVLPNGLLSL 320


>gi|163843881|ref|YP_001628285.1| hypothetical protein BSUIS_A1690 [Brucella suis ATCC 23445]
 gi|163674604|gb|ABY38715.1| Hypothetical protein BSUIS_A1690 [Brucella suis ATCC 23445]
          Length = 334

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 94/314 (29%), Gaps = 20/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++   +L        +   I ++ +Q  I  + A G++ V+     + L+     
Sbjct: 27  IFIAFLLLATILSFSNEYFLTAGNISNVLLQTSINGILAIGMTFVI-LTRGIDLSVGSVV 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+         +   ++     P S  I+   G+++G+      G  ++   +       
Sbjct: 86  ALAGIVSASFATTSAMAGIAGAPYSPFIAICVGLLVGIGCGALVGTIVSRFAVSAFVATL 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +L   + +T    G      L      + +               + +   ++ +  + 
Sbjct: 146 GMLSAARGLTLIYGGGKPVPALVPDFRWIGT------------GNILGVPVPVILLAIVF 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L R+        +  N  A  +    I   + S + +S    G+AG   +A   
Sbjct: 194 LVSWWILNRSRFGRYIYAVGGNPHAANTSGINISRVRFSVYVISGGLAGLAGMILSARTG 253

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                    S  +  I+ V++      GG+  ++       I+  +      M    +  
Sbjct: 254 SA-LPQAGISYELDAIAAVVIGGTSLSGGIGRITGTLIGALIIGVMNNGLDLMGIQSYYQ 312

Query: 309 LLKFDCSFNMRHTT 322
            +            
Sbjct: 313 QVLKGALIVGAVML 326


>gi|148257254|ref|YP_001241839.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. BTAi1]
 gi|146409427|gb|ABQ37933.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 290

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 96/305 (31%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   IY + A GL+++ G L +++        +  +   ++ +RYGL  +L I V
Sbjct: 11  LLNGLMLGAIYALIALGLTLIYGVLHIVNFAHGALLTVAMFMVWLVCARYGLDPYLAILV 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A +  A G  +    +           L+++     I+                     
Sbjct: 71  VAPLMFALGYGLQRFIIGPASHGKDNGILLVTLGLSIIIENALL-----------AAFQS 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+ +   F       ++               +  + L L +T I  A R +   + 
Sbjct: 120 DTRTITTDYSFRVVELGPLLLSFPRVVGFGVTIATTILLWLVLHQTDIGKAIRAVAKEKL 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +  ++       FA+  A + +A      S           +  ++  +IV+LGGM
Sbjct: 180 GASLVGISVPHVYAMTFAIGCACLAVAAGLLMPSFYV--SPKTGAAFVLVAFTIVVLGGM 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  V              +              + +   + +L+R   
Sbjct: 238 GSIPGALIGGLLIGVVEAASSLFLGDSLGQIG-------------IFLIFIVTLLVRPTG 284

Query: 339 LLRLR 343
           L   R
Sbjct: 285 LFGAR 289


>gi|260462645|ref|ZP_05810851.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259031551|gb|EEW32821.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 293

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 97/303 (32%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A GL+IV   +GL++        +  Y+  +    +GL   + + V
Sbjct: 6   IINAVSLGGVYALLALGLAIVFSIVGLINFAHGELMTLSGYAL-LASLVFGLPFPVAVLV 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +        + M   + +        + L+ S    ++L              VA     
Sbjct: 65  AVSCGALAAVAMERVAFRPMRGASVTSLLLTSFAVSSLLKVVFQNGISARPQAVAMP--- 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        F        +     ++       ++ ++LRR+    A R   ++  
Sbjct: 122 -------GWMTGAFSFGDFTIGVGPSISIVVSALALVALEVFLRRSVTGTAMRAAAEDFD 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         +AF +S    G+A   + A R  + P M  F+  +      ++GG+
Sbjct: 175 VVRLMGIPASRIIATAFLLSGLLAGLAAMLWVAQRASVDPLM-GFTPVLKAFIAAVVGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        +L  +  L                 +       +++  +  V+L+R   
Sbjct: 234 GSLPGAVAGGFLLGIIEVLLQA----------TLPGAIAPYRDAIVLSGVIAVLLLRPQG 283

Query: 339 LLR 341
           L+ 
Sbjct: 284 LIP 286


>gi|26991522|ref|NP_746947.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Pseudomonas putida KT2440]
 gi|24986605|gb|AAN70411.1|AE016683_2 branched-chain amino acid ABC transporter, permease protein,
           putative [Pseudomonas putida KT2440]
          Length = 346

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 79/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 73  ITFGLLGVINMAHGEMLMLGAYSTYMVQVLLQRFAPGAIEFYPLIALPVAFAVSAGVGMA 132

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         I +      +  +  + +         +
Sbjct: 133 LER--TVIRHLYGRPLETLLATWGISLILIQAIRLLFGAQNVEVSNPAWLSGGIQLLPNL 190

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++     +     L L RT +    R +  N+        +     + AF +
Sbjct: 191 VLPYNRLVIIGFALAVVLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVSTGRVDMLAFGL 250

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    +L
Sbjct: 251 GSGIAGLGGV--ALSQVGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSLWAAFGLGIANKL 308

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 309 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 343


>gi|84502432|ref|ZP_01000568.1| inner-membrane translocator [Oceanicola batsensis HTCC2597]
 gi|84389244|gb|EAQ02041.1| inner-membrane translocator [Oceanicola batsensis HTCC2597]
          Length = 316

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 59/320 (18%), Positives = 127/320 (39%), Gaps = 18/320 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A++  ++L +          + ++ +    +V+FA   ++++G  GLL     + +   A
Sbjct: 6   AILLIVVLVILAPFFVYPVLLMTILV----FVLFASSFNLLLGYAGLLCFGHAMFFGTSA 61

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y         G ++   +    +++ A G+ +G+ +++  G   A+ T  +++     L+
Sbjct: 62  YITGQFLKVTGSTLEFGLLAGVLVAAAMGLAVGVIAVRRSGIQFAMITFAIAQFVYFFLL 121

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           + +  T G+ G+    R    G    S  R               Y+V+LG   L+ ++I
Sbjct: 122 QAE-FTGGEDGMQQIPRSALFGVIDVSDHR-------------AFYFVVLGATVLALALI 167

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             +  +      R IRDN++   SL       KL A  +S+   G+AG   A      + 
Sbjct: 168 YRIIHSPYGEILRAIRDNEERVESLGFRPERFKLVAMTLSAGIAGLAGGLKATVFQFATL 227

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
               ++ +  VI + +LGG+ +L+  A    I+I + +       +   +         +
Sbjct: 228 TDVSWTVSGEVIFMTLLGGLGTLAGPAVGAGIVIFMNDELAQFGEWSLIAQGIILLLVIL 287

Query: 319 RHTTLMVIALFLVILMRSHS 338
                +V  +  V+  R   
Sbjct: 288 FFRRGVVGEIIAVLHKRRAG 307


>gi|316935425|ref|YP_004110407.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315603139|gb|ADU45674.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 286

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 105/303 (34%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL++V G LG+++L+    Y IGAY   +  +     ++L +   
Sbjct: 9   LNGLQTGLVIFLAASGLTLVFGILGVINLSHGSFYMIGAYL-ALSLTGMFGDVFLALVAG 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             ++   G+ +    ++   D   +  ++++     I  +++ +  G     +       
Sbjct: 68  IPLAFLLGLAIEWLFIRHLYDRDHLQQVLLTFALILIFNEFQQVVWGSYPHSIPAP---- 123

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                S +      +  + Y ++   ++     L+ S+ L +++T I    R    N++ 
Sbjct: 124 -----SYLAHSVRLTEGLSYPVYRLALMAICVALAISMALIIQKTRIGRLIRAAESNREM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L           FA   A    AG   A                II   +V++GG+ 
Sbjct: 179 VEALGFDSRLIFRMVFATGVALAATAGMLAAPIESA--YPGIGDRVLIISFVVVVIGGIG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+      + ++                             + ++   + LV+++R   L
Sbjct: 237 SVRGAFIGSLLIGLTDAFGKVF--------------LPQFSSIIIYALMALVLVIRPAGL 282

Query: 340 LRL 342
              
Sbjct: 283 FGR 285


>gi|255291855|dbj|BAH90350.1| branched-chain amino acid ABC transporter, permease protein
           [uncultured bacterium]
 gi|255292656|dbj|BAH89765.1| branched-chain amino acid ABC transporter, permease protein
           [uncultured bacterium]
 gi|255292841|dbj|BAH89942.1| branched-chain amino acid ABC transporter, permease protein
           [uncultured bacterium]
          Length = 342

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 59/329 (17%), Positives = 124/329 (37%), Gaps = 30/329 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L  ++    + L      + +    + ++ L ++  A   +++ G  GL+S+      
Sbjct: 22  LALRGLLVAGTVALAFAPWWAGRADMRLLMEALSFLALAQMWNLLAGYTGLISVGQQAFV 81

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G Y +  L    GL + L +P +A+ +    +  G  + + +G Y AI T +++E+F+
Sbjct: 82  GLGGYLFFALAMFTGLPVVLALPAAALATAIIAVPTGWIAFRLQGAYFAIGTWVIAEVFR 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I  +   +  G                   +             E+ MYY+   +  +S
Sbjct: 142 LIAAQVGALGGGSG-------------ISLPVDIARSLADGRTEREMVMYYIAFTIGLVS 188

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  + R+    A   IRD++ A  ++       K   + +++ + G+ GAF    + 
Sbjct: 189 VLGVWGVLRSKWGLALTAIRDSEPAAEAVGVATASVKYLIYLITALYTGLVGAFIFLQKL 248

Query: 255 RISPDMFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           RISPD           VI IV++GG+ S+        +   + ++               
Sbjct: 249 RISPDAAFSVNEWTAFVIFIVVIGGLGSIEGPIIGVIVFFALRQV--------------- 293

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              +   +  L+      V+L+    L  
Sbjct: 294 AADWGTWYLMLLGAIAIAVMLVDKRGLWG 322


>gi|206889204|ref|YP_002248609.1| branched-chain amino acid ABC transporter, permease protein
           [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741142|gb|ACI20199.1| branched-chain amino acid ABC transporter, permease protein
           [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 292

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 99/305 (32%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    Y +   G S+V G   +++L       +GAY    L   YG+  +L +P 
Sbjct: 7   LINGFLLGGFYALIGVGFSLVWGVTNIINLAHGAIALLGAYITFFLFQNYGIDPFLSLPF 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +     G  +    L           LI++   +  L+ +           V      
Sbjct: 67  SFLALFIFGYAIQRYLLNLVVKAQIFMLLILTFGIEIFLVNFMTTFFSADFRSVTP---- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             ++       V L   F++  + L+L +T    A +    + +
Sbjct: 123 -------DYAGESLIIGDIVIPYIRIIVFLICTFITFILSLFLNKTWAGKAIKATSLDIE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +           FA++S   G+AG+ F+ ++          S  +    + ILGG+
Sbjct: 176 AAMMVGINPAKIFALTFAIASGLAGVAGSLFSLTQAF--SPSIAGSLTLRAFIVSILGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        IL  V  L        + + +                 + LV++++   
Sbjct: 234 GRVEGALIGGIILGIVETLSSYFIGESYKNAITLG-------------IMVLVLIIKPTG 280

Query: 339 LLRLR 343
           +L  +
Sbjct: 281 ILGKK 285


>gi|163739270|ref|ZP_02146681.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis BS107]
 gi|161387340|gb|EDQ11698.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis BS107]
          Length = 343

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/337 (13%), Positives = 115/337 (34%), Gaps = 19/337 (5%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           RL  Y  ++ +  +    L+ +   A+     +  + + ++I+ + A GL++V G + ++
Sbjct: 19  RLAPYAPLILVPVLAIAGLIAVQNPASWLTLTVSGLAMGMMIF-LMASGLTLVFGLMDVI 77

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           +       ++GA+  + +    G           +++    ++  + +    G       
Sbjct: 78  NFGHGAFVSVGAFIGISVLLTLGHLTNAPSLGLNLLAILAAVLAAMAATAVMGWAFERVI 137

Query: 127 L--IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           +  +       IL+    +   +  I V      +  T    ++           E +  
Sbjct: 138 VKPVYGNHLSQILVTMGGLIIAEQLIIVLWGPEEIYFTRPEALKG-ALTFGDAAIEKYRL 196

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +     + A++   LRRT I    R    N +   +L   +    +  F   SA  G+
Sbjct: 197 VTVGVGLAVFAAMRFVLRRTKIGLIVRAGVQNGEMVAALGYRLRLVFIGVFIAGSALAGL 256

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            G  +   ++ I+  M      I++  +VI+GG+ S+        ++  +      +   
Sbjct: 257 GGVMWGLYQEVITAHM-GNQAMILIFIVVIIGGLGSVEGCFIGALLVGLLQNYIAFVE-- 313

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                               +  +  +++ R   ++ 
Sbjct: 314 ------------PKLALVSNIALMVAILMWRPMGMIP 338


>gi|163741934|ref|ZP_02149323.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161384655|gb|EDQ09035.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
          Length = 288

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 97/303 (32%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      +Y + A G  ++  +   ++        +GA+  + L +   L +   +  
Sbjct: 4   LVSGLANGCVYGLIALGFVLIYKATEAVNFAQGDFMMLGAFVTLGLTNAEYLHLPFWLAA 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              I+   G+   L  +  R          +    Q  ++            +       
Sbjct: 64  PLSIAIMAGLGYLLDLVILRH---------LFGQNQTAVVILTIALGFVIRFFAGAIWGH 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+ S +       + V+  +    +++    L+ S+  + +RT +  A +    NQ 
Sbjct: 115 EPQTLESPLALGDVQLAGVVLGLADLAIIIVTVLLTWSLYQFFQRTKLGLAMQAASQNQM 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A + +   +   +   + +S A   +AG  FA+     + D       I   +  ++GG 
Sbjct: 175 AAYFMGIPVKRVQGLIWGLSGATAAVAGILFASK---GAIDPNAGLLGIKAFAAAVIGGF 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        I+  +           ++ +                + L  V++ R H 
Sbjct: 232 GSLPGALAGGLIVGVIEPFAARYLEAGYSQIAP-------------YVLLLAVLVFRPHG 278

Query: 339 LLR 341
           L  
Sbjct: 279 LFS 281


>gi|94986265|ref|YP_605629.1| inner-membrane translocator [Deinococcus geothermalis DSM 11300]
 gi|94556546|gb|ABF46460.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Deinococcus geothermalis DSM 11300]
          Length = 286

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 96/304 (31%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GL++V G + + +      Y +GAY    + +  G+     + +
Sbjct: 8   LFNALALGGVYALVALGLTLVYGVMRVPNFAHGGLYMLGAYFTYAILTGLGVGYVPALLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+       ++             +  +I +      L     +  G     + + +  
Sbjct: 68  AAVGVALLAALLERVVFYPLRGAPHVHAMIAAIGVLFFLEAAVQLIWGPDFKQIPEPVP- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V+       V++    +   +  +L+RT        +  N++
Sbjct: 127 -----------GILNLGGVVITWQRLIVIVASLLVMLGLNFFLKRTLTGATIEAMSQNRE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    +  FA+S A   +A A  A               N+ V +I+ILGGM
Sbjct: 176 GARLVGINVNRVGMLTFAISGALAAVAAALIAPIISVA--PSMGEVMNLKVFAIIILGGM 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L              F  ++ F               L LV+ +R   
Sbjct: 234 GSVPGAIVGAFLLAFAEVFGGFYINLDFADVIGF-------------AVLVLVLAIRPEG 280

Query: 339 LLRL 342
           L R 
Sbjct: 281 LFRR 284


>gi|149199727|ref|ZP_01876758.1| sugar ABC transporter permease protein [Lentisphaera araneosa
           HTCC2155]
 gi|149137132|gb|EDM25554.1| sugar ABC transporter permease protein [Lentisphaera araneosa
           HTCC2155]
          Length = 342

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/310 (12%), Positives = 90/310 (29%), Gaps = 11/310 (3%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+ F     K   +  LL ++         G   S   + ++  Q+ ++ +F+ G+ +V+
Sbjct: 1   MNQFLKSHRKEVGMTILLIILCIWTAVGSGGRFLSPINVSNLLRQVGLFGIFSMGMGLVI 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
            S G + L+     ++    +    +     IW+      +       +       +   
Sbjct: 61  ISAG-IDLSVGSLMSLLGVIFFYTLTGDSPVIWIPELSWPLGLALVLGVSLFVGFVYGLL 119

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
                          +L              V                       FV   
Sbjct: 120 IGKFKMQAFIITLCGLLSYRGLSRYIAEDTSVGYIDAKQNLDFLYNACAGTISMGFVKVP 179

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +   Y+L+    +   +     ++        +  N++A            ++ + +S  
Sbjct: 180 MAFIYMLIIAAIMIVVLH----KSVFGRYLYAVGRNEEATKYSGINTNKIIIAVYMISCL 235

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGV 294
               +   FA     I+P +      +  I+  +LGG        S+  I   T IL+ +
Sbjct: 236 LTAFSAILFAFYTSSITPSVHANFYELYAIAAAVLGGCSLRGGEGSIYGIIVGTVILLVI 295

Query: 295 VELCCGMNFY 304
             +   + + 
Sbjct: 296 QNMINLLGYP 305


>gi|148260859|ref|YP_001234986.1| inner-membrane translocator [Acidiphilium cryptum JF-5]
 gi|326404253|ref|YP_004284335.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|146402540|gb|ABQ31067.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidiphilium cryptum JF-5]
 gi|325051115|dbj|BAJ81453.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 294

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 88/301 (29%), Gaps = 24/301 (7%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                IY + A G  ++  S+ +++        IGAY  V L     L  WL + ++   
Sbjct: 13  LAVGSIYALIALGFVLIYTSVNVVNFAQGDFAMIGAYFMVSLVVVLHLPWWLALLLAVAG 72

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +G  G +  L   +   +       +M       +   +        I       F    
Sbjct: 73  TGVVGALFQLLIFQPVRNRPRNFLPVMIATVGASVFLEQAFLLIYGPIPYQLPPIF---- 128

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                +        V        +++    + A +  +L RT +    +    +      
Sbjct: 129 -----KAQSVALLGVHVYPQYIVIIVVTAAMVALLNWFLERTKLGKQLQATAQDPDTARL 183

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   + +     FA+S+A  G+AG   A      +      +      +  I+GG  S+ 
Sbjct: 184 MGIRVAWMAALTFAISTALGGLAGLLIAPVYTVTATMGSTIAL--KAFAAAIVGGFGSMK 241

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   +  +           +     F             I L L ++ R + L   
Sbjct: 242 GAIVGGLGIGLIETYGATYISGSYRDAFPF-------------IVLILFLIFRPYGLFGE 288

Query: 343 R 343
           +
Sbjct: 289 K 289


>gi|87119599|ref|ZP_01075496.1| putative permease abc transporter protein [Marinomonas sp. MED121]
 gi|86165075|gb|EAQ66343.1| putative permease abc transporter protein [Marinomonas sp. MED121]
          Length = 360

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 78/309 (25%), Gaps = 18/309 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +L +       L          +  +  Q+ I  +     ++++ + G + L+      
Sbjct: 53  IVLLLAIFGFSLLIGNRFLHPFNLSLILQQVTIIGVIGVAQTLIILTAG-IDLSVGAIMV 111

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     +    GL  WL + +   +    G I GL   + +           +  F  
Sbjct: 112 LCSVVMGRMAIDLGLEAWLALALGISVGALAGFINGLLITRLKIPPFIATLGSWNVFFAI 171

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L   K  T     I     L                  +   +   + Y  L M  L  
Sbjct: 172 NLWYSKSETIRSQDISSIAPL------------LQWTGETINFFGARLTYGSLLMLGLFF 219

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I   L  T+         D+  A            +S + ++     +           
Sbjct: 220 LIWYALNWTSWGRHVYATGDDPDAARLAGIQTNRILMSVYVLAGIVCAVGAWVLIGRIGS 279

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           ISP     +    + ++VI      GG  S+        ++                   
Sbjct: 280 ISPQAGYTANLDSITAVVIGGCSLFGGRGSIYGTLIGALVVGVFRNGLALAGVDVLWQEF 339

Query: 311 KFDCSFNMR 319
                  + 
Sbjct: 340 TVGILIILA 348


>gi|325275616|ref|ZP_08141518.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas sp. TJI-51]
 gi|324099290|gb|EGB97234.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas sp. TJI-51]
          Length = 292

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 89/292 (30%), Gaps = 24/292 (8%)

Query: 50  VMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMI 109
            + + GL+++ G + +++        IG Y+  ++   +GL  +  +  +  +    G  
Sbjct: 19  AIISIGLTLIFGIVRVVNFAHGEFLMIGMYAVYLMNVHFGLHPYATVIPAVALLFVLGAG 78

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           M    ++          +  +      L+    +  G            L  +  S +  
Sbjct: 79  MQRFIIQPLLAAEGHIQIFATVGVSIALMNAALMVFGAD---------VLTVSNPSGVGA 129

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                  +          +    L   +  +L  T +  A R    ++ A   +   +  
Sbjct: 130 GSLAVGPLRANTGQLLTFMVSLALVGGLHWFLHNTFLGRAVRATAQHRNAALLMGVNVNR 189

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
             + AF +  A +G+A A  A          F     +    IV+LGG+ SLS     + 
Sbjct: 190 IYIFAFGLGCACLGLAAAMIAPQYPV--FPTFGTFFVLTAFVIVVLGGLGSLSGALVGSL 247

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           ++  V  L                         +  +    +++ R   L  
Sbjct: 248 LIGVVDSLAGYYI-------------APDLKEVVYFLIFLAILIFRPTGLFG 286


>gi|13475997|ref|NP_107567.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14026757|dbj|BAB53353.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 355

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 60/320 (18%), Positives = 111/320 (34%), Gaps = 34/320 (10%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                         + IYV+ A   + + G  GL+S+   + + +GAY + I  +  GL+
Sbjct: 35  PQFLSAGAVDRMTALFIYVILAAMWNALAGFGGLVSVGQQVFFGLGAY-FAIRLADAGLN 93

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            +  + VSA+I G     + L  L+ R    AI    +     ++L+    +  G+ G  
Sbjct: 94  PFASLFVSAIIVGLVSWPLSLFMLRLRNGEFAIGMW-VIAALTHLLVNLDRLVQGETGTS 152

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           +     +                      + +Y++ LG      +I+  L R +   A R
Sbjct: 153 LISLNVY----------------DAGTRRVAIYWLALGSMTALLAILFGLLRGSTGAAIR 196

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF-AASRDRISPDMFKFSENIIVI 270
            IRDN+ A  S+   +   K   F +++  IG+AGA + A S        F       +I
Sbjct: 197 AIRDNEDAAASVGVRVTGTKRLLFVLAAFGIGVAGALWLATSVTFQPKTYFNVQWTAYMI 256

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            I+++GG+ +         +   +     G                 + +   +     L
Sbjct: 257 FILLVGGIGTFEGAILGALVFFLIETWFGG---------------TGVWYLVGLGATAVL 301

Query: 331 VILMRSHSLLRLRTPSNFLE 350
             L     L         L 
Sbjct: 302 FSLFLPRGLWGTIEERFGLR 321


>gi|332294991|ref|YP_004436914.1| ABC-type transporter, integral membrane subunit [Thermodesulfobium
           narugense DSM 14796]
 gi|332178094|gb|AEE13783.1| ABC-type transporter, integral membrane subunit [Thermodesulfobium
           narugense DSM 14796]
          Length = 302

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/290 (9%), Positives = 88/290 (30%), Gaps = 2/290 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++      + +G++  ++      ++ +  I  
Sbjct: 6   LVNGVTLGAVYALIALGYTMVYGILELINFAHGEIFMMGSFFGLLFWWILEMTGFSRIIP 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +I     +   + +         IA   +  +   ++     +         A   + 
Sbjct: 66  IPLIIFLMFIFSMVATAFLGALLEFIAYRPLRSVTNRLIPLISALGASIFLQNFAMLTFG 125

Query: 159 LGTTVRSLIRFF-RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
               V   I     +        +   ++ +    + A + + + +T +  + R +  + 
Sbjct: 126 STNRVYPAIFPDVGWDLFHARISLIQVFIFITCILMMAGLTVLVNKTKLGRSMRAVAQDY 185

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                +   +       F + S+    AG  +      ++     +   +   +  +LGG
Sbjct: 186 VTASLMGIRVNRIITITFMIGSSLAAAAGVMYGMYYG-VAKFDMGYLAGLKAFTAAVLGG 244

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           + ++         L  +     G     +  +  F     +       + 
Sbjct: 245 IGNIPGAMLGGFCLGIIESFGAGYISSEYKDMFAFLMLLFILLLRPSGLL 294


>gi|242238259|ref|YP_002986440.1| inner-membrane translocator [Dickeya dadantii Ech703]
 gi|242130316|gb|ACS84618.1| inner-membrane translocator [Dickeya dadantii Ech703]
          Length = 352

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 85/264 (32%), Gaps = 3/264 (1%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               L++   A GLS + G  G+LS      + +  Y Y +L   +G           + 
Sbjct: 45  LSYFLLWTFCAMGLSAMWGYGGILSFGQTAFFGLAGYVYGVLTLNFGDGFISTWSGFILA 104

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
             A G +            +    + +  +   ++++            +          
Sbjct: 105 LAAAGAVASALGYMMFYGGVTGIFVGIVTLSFTLVLETFMSQTAGPQWVIGSARLNGFNG 164

Query: 163 VRSLIRFFRFPSS---FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           +  +            F +     YY++L +  ++  ++  L R  +      IR+N + 
Sbjct: 165 MSGMPPLSLPFGGEHPFTLDGNAFYYLILALLVIAYLLMQRLLRGNVGLTLAAIRENPQR 224

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L   I   +L  F +     G++G  +      I+P     +   + +  V   G  
Sbjct: 225 AEMLGIDIRRYQLLIFTLGGVLSGLSGVLYTQWGSYITPSSMGLTAAAMPVIWVATAGRK 284

Query: 280 SLSKIAKATAILIGVVELCCGMNF 303
           SL+     TA+L+ + +       
Sbjct: 285 SLAGTIAITALLVWLSQWLAVYGS 308


>gi|163850716|ref|YP_001638759.1| inner-membrane translocator [Methylobacterium extorquens PA1]
 gi|218529438|ref|YP_002420254.1| inner-membrane translocator [Methylobacterium chloromethanicum CM4]
 gi|254560341|ref|YP_003067436.1| ABC transporter permease [Methylobacterium extorquens DM4]
 gi|163662321|gb|ABY29688.1| inner-membrane translocator [Methylobacterium extorquens PA1]
 gi|218521741|gb|ACK82326.1| inner-membrane translocator [Methylobacterium chloromethanicum CM4]
 gi|254267619|emb|CAX23465.1| ABC transporter, permease [Methylobacterium extorquens DM4]
          Length = 296

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 55/303 (18%), Positives = 105/303 (34%), Gaps = 27/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      ++VM A GLSI+ G LG+++      + +GAY+  +       S W  +  
Sbjct: 15  LFSGVALGAVFVMLALGLSIIFGMLGIVNFAHGNVFMVGAYA-GVFVMERTGSFWAALLF 73

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ GA G+++    ++          L+++     +L++   I  G  G+  A     
Sbjct: 74  GPLMVGALGLLIERFLIRPLAGRSPDDPLLLTFGLGYVLVEGVRILFGSDGLPFATPEEL 133

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                  + I+  +V+  +  +  ++   L RT +    R    + +
Sbjct: 134 SGV----------ADLGIGFFPIYRLFVVGVVALVLVALWYGLERTRLGLIVRAGARDPE 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   I    L  FA+  A   + G   A  R                 ++ ++GGM
Sbjct: 184 ILRVLGVDIQRLWLWVFALGIALAALGGVLAAPMRSV--NPEMGNVVLGEAFAVTVIGGM 241

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL     A  ++  VV +                       +  M   + LV+L+R   
Sbjct: 242 GSLMGSVVAGLLVGIVVSMTALFA--------------PEMASIAMFAFMALVLLVRPQG 287

Query: 339 LLR 341
           L  
Sbjct: 288 LFG 290


>gi|86748706|ref|YP_485202.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86571734|gb|ABD06291.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 339

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/300 (16%), Positives = 116/300 (38%), Gaps = 15/300 (5%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
               +  +  G     +Y+  +  +IL   +FA  L +++G  G++SL     + +GAY+
Sbjct: 23  FVFWIALIGCGLLFPSRYL--IMTEILRIGLFALSLDLILGYAGIVSLGHAAFFGVGAYA 80

Query: 81  YVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
             ++     +    L + V+ +++   G       ++       + TL ++ + + +  +
Sbjct: 81  AGLMALHGIVGEPVLALLVAGLVAAVLGFATSFLVIRGVDLTRLMVTLGIALLMEALAER 140

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           +  IT G  G+        LG               F I+    ++  + + F+   +  
Sbjct: 141 FSDITGGSDGLQGIVMQPILGL------------FEFDIFGKVAFWYSVAVLFVLFLLAR 188

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +    + R IR+N     ++   +    +  + +++ + G+AGA F  +    S D
Sbjct: 189 RVVHSPFGLSLRAIRNNPLRASAVGIPVNRRLVMVYTLAAFYAGIAGALFTQTTQLASLD 248

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +F F  +  ++ +++LGG   L        I   + E    +   Y+   +       + 
Sbjct: 249 VFSFERSADLVLVLVLGGTGYLYGGLIGAVIFKILQEFFSTLTPQYWLFWIGLVLVTIVL 308


>gi|222081238|ref|YP_002540601.1| sugar ABC transporter [Agrobacterium radiobacter K84]
 gi|221725917|gb|ACM29006.1| sugar ABC transporter [Agrobacterium radiobacter K84]
          Length = 334

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/314 (11%), Positives = 94/314 (29%), Gaps = 20/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L  ++  ++L +      +   I ++ +Q  I  + A G++ V+     + L+     
Sbjct: 27  IFLAFLLLAVILSVSNEYFLTPGNISNVLLQTSINGVLAIGMTFVI-LTRGIDLSVGSVV 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+         +    +  +  P    ++ A G+++G+              LI+S    
Sbjct: 86  ALTGIISASFATTSATAGIVGAPYPPYVALAVGLLVGVACGAV-------VGLIVSRFAV 138

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +    + +   G+ +          +    R+    + F I    +   ++      
Sbjct: 139 PAFVATLGMLSAARGLTLIYGGGKPVPALTPDFRWIGTGTVFSIPMPVILLAIVFAVSWW 198

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                   RT        +  N  A  +    +   +   + +S    G+AG   +A   
Sbjct: 199 VL-----NRTRFGRYIYAVGGNPHAANTSGINVTRLRFLVYVISGGLAGLAGMILSARTG 253

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                    +  +  I+ V++      GG+  ++       I+  +      M    +  
Sbjct: 254 SA-LPQAGIAYELDAIAAVVIGGTSLSGGVGRITGTLIGALIIGVMNNGLDLMGIQSYYQ 312

Query: 309 LLKFDCSFNMRHTT 322
            +            
Sbjct: 313 QVLKGALIVGAVML 326


>gi|239834758|ref|ZP_04683086.1| ribose ABC transporter permease [Ochrobactrum intermedium LMG 3301]
 gi|239822821|gb|EEQ94390.1| ribose ABC transporter permease [Ochrobactrum intermedium LMG 3301]
          Length = 334

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/314 (12%), Positives = 94/314 (29%), Gaps = 20/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++   +L        +   I ++ +Q  I  + A G++ V+     + L+     
Sbjct: 27  IFIAFLLLATILSFSNEYFLTAGNISNVLLQTSINGILAIGMTFVI-LTRGIDLSVGSVV 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       L +    +     P S  I+   G+++G+      G  ++   +       
Sbjct: 86  ALAGIVSASLATTSATAGIAGAPYSPFIAIPVGLLVGIGCGALVGTIVSRFAVPAFVATL 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +L   + +T    G      L      + +               + +   ++ +  + 
Sbjct: 146 GMLSAARGLTLIYGGGKPVPALVPDFRWIGT------------GNILGVPVPVILLAIVF 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L R+        +  N  A  +    I   + S + +S    G+AG   +A   
Sbjct: 194 LVSWWILNRSRFGRYIYAVGGNPHAANTSGINISRVRFSVYVISGGLAGLAGMVLSARTG 253

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                    S  +  I+ V++      GG+  ++       I+  +      M    +  
Sbjct: 254 SA-LPQAGISYELDAIAAVVIGGTSLSGGVGRITGTLIGALIIGVMNNGLDLMGIQSYYQ 312

Query: 309 LLKFDCSFNMRHTT 322
            +            
Sbjct: 313 QVLKGALIVGAVML 326


>gi|15964230|ref|NP_384583.1| ABC transporter permease [Sinorhizobium meliloti 1021]
 gi|307301376|ref|ZP_07581138.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
 gi|307318048|ref|ZP_07597485.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|11066208|gb|AAG28499.1|AF196574_2 FrcC [Sinorhizobium meliloti]
 gi|15073406|emb|CAC41914.1| Putative fructose ABC-type transport system, permease component
           [Sinorhizobium meliloti 1021]
 gi|306896450|gb|EFN27199.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|306903832|gb|EFN34419.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
          Length = 360

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 91/293 (31%), Gaps = 18/293 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +       +  G   S   +  +  Q+ I  +     ++V+ + G + L+     
Sbjct: 52  LIVLVLSLIAFGVILGGKFFSAFTMTLILQQVAIVGIVGAAQTLVILTAG-IDLSVGAIM 110

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +        RYG    L +     +   CG I G    + +                
Sbjct: 111 VLSSVIMGQFTFRYGFPPALSVICGLGVGALCGYINGTLVARMKLPPFI----------- 159

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    I      +Y A+          +      F  +F I      Y ++ M  L 
Sbjct: 160 -VTLGMWQIVLASNFLYSANETIRAQDISANASILQFFGQNFRIGNAVFTYGVVVMVLLV 218

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L RTA       + D+ +A       +    +S + +S     +AG        
Sbjct: 219 CLLWYVLNRTAWGRYVYAVGDDPEAAKLAGVNVTRMLISIYTLSGLICALAGWALIGRIG 278

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
            +SP   +F+    + ++VI      GG  S+  +     I+         M 
Sbjct: 279 SVSPTAGQFANIESITAVVIGGISLFGGRGSIMGMLFGALIVGVFSLGLRLMG 331


>gi|300689808|ref|YP_003750803.1| branched-chain amino acid transport system permease, membrane
           component (livH) [Ralstonia solanacearum PSI07]
 gi|299076868|emb|CBJ49481.1| putative Branched-chain amino acid transport system permease,
           membrane component (livH) [Ralstonia solanacearum PSI07]
          Length = 294

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 106/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y M + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGVPLPAMLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLTWMGLS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              L  W+++  + +  G  GM++    L+F      +  L+++     ++        G
Sbjct: 63  YLDLPYWVMLVAAPLAIGVVGMVIERTMLRFIYKLDHLYGLLLTLGVTLVIEGVFRAIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+  +      G T             F++   +  +V+     +  +    + +T +
Sbjct: 123 VSGLPYSTPELLSGAT----------DLGFMVLPNYRAWVVAASLTVCFATWFMIEKTKL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +   +  
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPLMVTLTYGFGVALAAFAGVLAAPVIQI--SPLMGQNMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+         L  +  L                  +    +T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSIVTGLGLGVIEGLTKVF--------------YPQASSTVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + LV+L+R   L  
Sbjct: 277 IMALVLLVRPAGLFG 291


>gi|316934431|ref|YP_004109413.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315602145|gb|ADU44680.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 354

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 95/287 (33%), Gaps = 3/287 (1%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V    LL        S  Y         ++V  A  L ++ G  G LS      + I  Y
Sbjct: 26  VFVVALLGALAYPMFSDGYTVGNTAYFFVWVFIALSLCLIWGYGGALSFGQTAFFGIAGY 85

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI-MSEIFQNILI 138
           SY IL   +G +    +           ++  L         +    L  ++     +L 
Sbjct: 86  SYGILTLNFGAAYGFTLVAVLAAVAIAAVVALLLGYFMFFGRIEGVFLGIVTLAVTLMLE 145

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE--IFMYYVLLGMCFLSAS 196
           ++   T G        RL               +    ++    + +YY++L +  +   
Sbjct: 146 RFMAQTAGPDWRIGTARLNGFNGMSGMPPITIPWFDGPIVLFADVGLYYLVLALVVVVYL 205

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L  ++  N    IR+N +    L   I   +L  F + +   G++G  + A    I
Sbjct: 206 GLRILVNSSFGNVIVAIRENPERAEMLGYDIRKYQLVNFVIGAGLAGLSGVLYTAWGQYI 265

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           +P     +   + +  V +GG + L+     T +++   +       
Sbjct: 266 TPSSMGMTSAALPLIWVAVGGRSDLTSTLVGTLVVLAGFQALTIYGS 312


>gi|254473704|ref|ZP_05087099.1| inner-membrane translocator [Pseudovibrio sp. JE062]
 gi|211957090|gb|EEA92295.1| inner-membrane translocator [Pseudovibrio sp. JE062]
          Length = 290

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 95/294 (32%), Gaps = 14/294 (4%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y+    +   IY + A G+++V G L    L       +GA++ + + + +G+S W
Sbjct: 6   FVNFYLMPGIVLGSIYALGAVGITLVFGILRFAHLAHGDLATLGAFAALGVVTIFGVSPW 65

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + +PV+ ++     + +      +  +   I  ++ S     +L     +  G       
Sbjct: 66  VALPVAMIVCAIMAIGIDKVFYDYLSERPKIIVVMSSLGIALMLRAVVQVIWGVDTETYT 125

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             +          IR                Y ++ M  +   +  +L++T    A R +
Sbjct: 126 RGIVRPEDYWGIRIRDREI------------YTIIAMFVIVGVLWAFLQKTKWGKAMRAM 173

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            DN               +  + +       +G F   + +     +  ++  + + +  
Sbjct: 174 SDNPDLALLSGVDNRKITMLTWGIVGILCAASGFFLGINTEL--KPLMGWTMLLPMFAAA 231

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           ILGG+  +        I+    E         + + + F     +       + 
Sbjct: 232 ILGGVGRVEGAVIGGLIVGIAEETSVLFIPGEYKAAMAFAILLLILLVRPTGLL 285


>gi|117928290|ref|YP_872841.1| inner-membrane translocator [Acidothermus cellulolyticus 11B]
 gi|117648753|gb|ABK52855.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidothermus cellulolyticus 11B]
          Length = 312

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 89/313 (28%), Gaps = 20/313 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS------YVILGSRYGL 90
            +  S      +Y + A G ++V G L L++      +  G +       + I       
Sbjct: 9   DFFVSGLANGFVYALIALGYTLVYGVLQLINFAHSEVFMSGGFGGLFAINFAIGSRHPHG 68

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              +   +  + +GA    +    L+                F    I         AG 
Sbjct: 69  LSSVWFVLVGLAAGAVTGGVVAYILERVAYRPLRRRNAPKLAFLISAIGMSYFLYNLAGK 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                   +            F        ++   + +    +   +   +++T +    
Sbjct: 129 EFGRDARTMKPPFTVSPNKPLFTVFGAPVNLYDAVIAVSAIAMLILLDRVVQQTRLGQGI 188

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +  +      +   I       F +     G AG  F      +S  M  F+  I   
Sbjct: 189 RAVAQDADTAALMGVNIDRVIAQTFVLGGLLGGAAGFLFGLGTAGVSYTM-GFTPGIKAF 247

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ ++        +L  V  L        +  ++ F               L L
Sbjct: 248 TAAVLGGIGNIRGAMLGGLLLGVVENLSSACFGASWVDVVAFY-------------ILVL 294

Query: 331 VILMRSHSLLRLR 343
           V+L+R   LL  R
Sbjct: 295 VLLVRPMGLLGER 307


>gi|329915395|ref|ZP_08276251.1| Urea ABC transporter, permease protein UrtC [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327544931|gb|EGF30279.1| Urea ABC transporter, permease protein UrtC [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 380

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/353 (12%), Positives = 95/353 (26%), Gaps = 36/353 (10%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + ++    L + +       +   +  + L Y   A GL +  G  G+LSL   + + 
Sbjct: 14  GAIGLLVLGALLIVVFPLLLDSFRLGLVGKYLSYAFVAVGLVLCWGYGGILSLGQGVFFG 73

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM------ 129
           +G Y   +               S            +  L           L +      
Sbjct: 74  VGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITELPMMWQPFHSLGLTILLVLAV 133

Query: 130 ----------------SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
                                  ++           I     L      +  L     + 
Sbjct: 134 PTLIAFILGVAMFKRRVGDVYFSIVTQAVAAILAILIVGQQGLTGGVNGITDLKTMLGWD 193

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
                 ++ +Y+V + +         ++  + +      +RD ++        +   K+ 
Sbjct: 194 IRTDSAKLILYFVTVALLLACVLFGRFILTSKLGRLLMAMRDKEERVRFSGYDVASFKIF 253

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            F V++AF  + GA F      +SP       +I ++    +GG  SL      T ++  
Sbjct: 254 VFCVAAAFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAVGGRMSLLGAIYGTLLVNF 313

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                             F  +F      LM      V++   + +  L    
Sbjct: 314 GKTY--------------FSETFPELWLFLMGGLFITVVMYFPNGIAGLYESH 352


>gi|284045827|ref|YP_003396167.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283950048|gb|ADB52792.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 294

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 89/305 (29%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +         Y + A  +++V G L L +        +G Y+     +  G     ++ V
Sbjct: 8   LLDGLALGSFYSLLALSVALVFGLLHLANFAHGELLMVGGYALY---AMEGAPFPFVVLV 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++     ++M   + +   D      LI +     +L        G            
Sbjct: 65  VVIVVVLMAVLMERLAFRPLRDADPTTLLISAFAVAYLLQSLALFAFGG----------R 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T   +           +   +     +     L   +  +LRR+ I    R   ++ +
Sbjct: 115 PKTVEVASFASGSIDLLGLHLSVLDLVNVGAAAVLLGGLAAFLRRSPIGTQMRAAAEDFR 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L          AFA+S  F  +      A    ++P M   +  +I     ++GGM
Sbjct: 175 MARLLGVRANRVIAVAFAISGLFAAVTVILLVAQSGTVTPTM-GLAPVLIAFVATVVGGM 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L   A    +L  V  L                          +  A+  V+L+R   
Sbjct: 234 GRLGGSAVGGFLLGIVTVLLQTY----------LPDGLVPFRDAFLFSAVIAVLLVRPQG 283

Query: 339 LLRLR 343
           L   +
Sbjct: 284 LFGSK 288


>gi|163747297|ref|ZP_02154651.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanibulbus indolifex HEL-45]
 gi|161379407|gb|EDQ03822.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanibulbus indolifex HEL-45]
          Length = 304

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 89/308 (28%), Gaps = 14/308 (4%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            + +        IY M A G++++ G + L++       A   ++ ++  +     ++L 
Sbjct: 5   PQLLFDALSLGGIYAMAALGIALIFGVMKLVNFAHGEYIAFCVFALIVPSTDAVAVMFLG 64

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
              + ++     +I    ++                           +      +  + R
Sbjct: 65  KAPAILLIPLLLLIGAAIAVASEFFVFRHMRNATPVAMMISSFALGFVIQNTLLLVYSSR 124

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
              +               +     +    V+     +  ++ L L+RT I    R   +
Sbjct: 125 PKAVSLW---PELNQPVSIAGASIPLLQIIVICTTLLVVVTLALLLKRTRIGLEMRAAAE 181

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N      L          AFA+S A    A A    ++  ++         ++     ++
Sbjct: 182 NFTMARLLGVRANVVITGAFALSGALAA-AVALIMVTQTGVADIRMGGQIMLVAFIATVI 240

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ SL     A  ++     +  G                       +   + + +L+R
Sbjct: 241 GGLGSLPGAVAAGFLIGAASVILQGF----------LPLEARPFRDAFLYTLVIVSLLLR 290

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 291 PDGLFAPR 298


>gi|154244003|ref|YP_001414961.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154158088|gb|ABS65304.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 280

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 53/316 (16%), Positives = 113/316 (35%), Gaps = 43/316 (13%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y+  + + +   VM A+ + + +   G L+L      AIGAY    L + Y   +W  
Sbjct: 2   SGYLTGVLVVLAFNVMAAYAVYLPLA-AGQLNLGIAGFMAIGAYGSAFLTNEYMWPMWAA 60

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           IP  A+ +G  G+++GLP L+  G Y A+AT  + ++   + +  + +            
Sbjct: 61  IPAGALAAGLTGLLIGLPVLRTHGIYFAMATFALGQVISALFLNLEVVGGAA-------- 112

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                               + + +     V+         ++L++ RT  +     ++ 
Sbjct: 113 -------------------GYPVTDYAGPNVVFAAAAGVVVLMLYISRTRFALELTAVKS 153

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +      L   +   K++AFA+ +   G  GA +A   + +    F    ++  +  V+ 
Sbjct: 154 DATVADLLGVPVRGMKVAAFALGAMVAGFGGALYAHHYNFVEAQHFNVLLSVFTVLYVLF 213

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG  ++            V EL                 + +     +  + + + + +R
Sbjct: 214 GGTQTVWGPLVGAVFFTLVPELLR---------------ASDQWRYAVFAVFIIVFMALR 258

Query: 336 SHSLLRLRTPSNFLER 351
              L+       F  R
Sbjct: 259 PQGLVTAALFRLFRRR 274


>gi|90423204|ref|YP_531574.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90105218|gb|ABD87255.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 291

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/297 (11%), Positives = 73/297 (24%), Gaps = 26/297 (8%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            +Y + A G  ++  +  +++        + AY  V+     G   WL    +       
Sbjct: 16  AVYALVALGFVLIFRATNVVNFAQGEFSMVAAYLMVVFAVDLGWPYWLSFLCALAGMALL 75

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G I  L           +  +I +     ++        G                +   
Sbjct: 76  GAIFNLGVYYPLRHRTFLPVIIATIGASILMANSVLAIYGPQPQV-----------LEGW 124

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                     V  +     ++   C L A    +   T +    +    +++    L  +
Sbjct: 125 FETPGIQLGPVYLDSQYLLIIAVTCALVAFNYWFFEHTMLGKKLQATSQDKEMASLLGIS 184

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +    +  F  S+   G+AG   A             +  +   +  I+GG   ++    
Sbjct: 185 VSGMIMITFIYSAVLGGLAGILVAPVLFV--SIQMGSTIALKAFAATIIGGFGDVTGAII 242

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
               L  +           +     F                      R   +   R
Sbjct: 243 GGLSLGIIETFGAAYISVPYKDAFAFLVLVLFLVF-------------RPQGIFGER 286


>gi|309781987|ref|ZP_07676717.1| branched-chain amino acid ABC transporter, permease protein
           [Ralstonia sp. 5_7_47FAA]
 gi|308919053|gb|EFP64720.1| branched-chain amino acid ABC transporter, permease protein
           [Ralstonia sp. 5_7_47FAA]
          Length = 315

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 113/321 (35%), Gaps = 27/321 (8%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
            + +     L+  M + GL+++   +G+L+      Y +GAY   ++        W  + 
Sbjct: 7   NLLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYVVSGYL--GFWPALI 64

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           V+ ++ GA G ++    L+    Y  +A L+ +     ++ +   +  G         L 
Sbjct: 65  VAPLLVGALGAVVERFGLRTVHRYGHVAELLFTFGLAYLIEEGVKLVWG---------LP 115

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   V   +    F      +  +  +++L    +   I L L RT I    +    + 
Sbjct: 116 AVPYRVPDALDGPLFTLFTSSFPKYRAFMMLVSLLMLVGIFLLLTRTRIGLVIQAALTHP 175

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +L   +    +  F    A  G+AG         ++      +   IV  + ++GG
Sbjct: 176 DMVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NAFVTEPSMAAAVGSIVFVVAVVGG 233

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL------- 330
           M SL     A+ ++  +      ++    + L K   + N     + V  L +       
Sbjct: 234 MGSLVGAFVASLLIGCIQTFAVTLDISVTSVLGKIGVTLNPDVPLISVWNLTIAQVAPVL 293

Query: 331 -------VILMRSHSLLRLRT 344
                  +++ R   L+  R 
Sbjct: 294 PYLLLVLMLIFRPRGLMGTRE 314


>gi|297623210|ref|YP_003704644.1| inner-membrane translocator [Truepera radiovictrix DSM 17093]
 gi|297164390|gb|ADI14101.1| inner-membrane translocator [Truepera radiovictrix DSM 17093]
          Length = 433

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/381 (11%), Positives = 108/381 (28%), Gaps = 70/381 (18%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +  V Y ++             + S      +Y + A G ++V G + L++      +
Sbjct: 64  LIIGRVAYLIVGTGNYTLAFFVGALLSALQLGSLYALIALGYTMVYGIIRLINFAHGEVF 123

Query: 75  AIGAYSYVILGSRYGL-------------------------------------------- 90
            +GA++   L +                                                
Sbjct: 124 MVGAFTSFFLFANTPYSLPWALFAAALAAAGLMYAVNLWRGKLQDPVVLGAGALGFVGFT 183

Query: 91  --------SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
                   +    + ++ +I+G  G+ +   + +       I+ LI +      L  +  
Sbjct: 184 LALSAASLNWIAAMLLAMLITGVVGITLDRVAYRPLRGAPRISLLITAIAMSFFLQNFGL 243

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +   +          +      +    F    + V     +  + L    L  ++ L++ 
Sbjct: 244 LAFTRNQTPYRPATSW------TQFLQFPLAGNTVFTSRMVILIPLVTLVLVVALTLFVN 297

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-F 261
           RT +  A R    + +    +   +     + F + S     AG  +  +   ++    F
Sbjct: 298 RTRLGKAMRASAQDPEVAQMMGINVNRVIATTFFLGSTLAAAAGVLWGLNFGSLNQPAIF 357

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
                +   +  ++GG+ SL        +L  +      M                    
Sbjct: 358 GLLPGLKAFAAAVIGGIGSLPGAVIGGLLLGFLENFVPAMF-----------AGTTEFKD 406

Query: 322 TLMVIALFLVILMRSHSLLRL 342
           T     L +++L+R   ++  
Sbjct: 407 TFAFFLLIVILLIRPSGIIGE 427


>gi|222106236|ref|YP_002547027.1| ABC transporter membrane spanning protein (ribose) [Agrobacterium
           vitis S4]
 gi|221737415|gb|ACM38311.1| ABC transporter membrane spanning protein (ribose) [Agrobacterium
           vitis S4]
          Length = 349

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 84/309 (27%), Gaps = 10/309 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            VV   +  L   A  S     ++ +Q+        G + V+   G + L+     A+  
Sbjct: 39  LVVLAAVFALTSNAFLSVNNGMTIALQVTSIAFLGIGATYVI-ITGGIDLSVGSVLALAG 97

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               +     G  +W+ + +  +   ACG+I GL   + +         +M       L 
Sbjct: 98  VVAALAVKELGAPVWIGMVLGVLTGTACGVINGLVITRLKLPPFIATLGMMLIARGVALQ 157

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                     G               S+        SF      +  +++     +  + 
Sbjct: 158 ITGARAVSGLGESFGVLGNGSLLRFESIDDQGFPVVSFPGIPYPVVLMVVIAVAAAFVL- 216

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
               RT +         N  A       +       + VS    G+ G    +      P
Sbjct: 217 ---NRTVLGRHIYATGSNADAAQLSGVNVARVTAFTYIVSGTLAGLTGCMLMSRLVTAQP 273

Query: 259 DMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           +     E   + S VI     +GG+ ++S       ++  +           F   +   
Sbjct: 274 NEGVAYELDAIASAVIGGTSLIGGVGTISGTFIGAFVIGILRNGLNMNGVSAFTQQIIIG 333

Query: 314 CSFNMRHTT 322
                    
Sbjct: 334 LVILGTVWI 342


>gi|18310611|ref|NP_562545.1| ribose ABC transporter [Clostridium perfringens str. 13]
 gi|110798946|ref|YP_696314.1| ribose ABC transporter, permease protein [Clostridium perfringens
           ATCC 13124]
 gi|168207155|ref|ZP_02633160.1| ribose ABC transporter, permease protein [Clostridium perfringens E
           str. JGS1987]
 gi|168209300|ref|ZP_02634925.1| ribose ABC transporter, permease protein [Clostridium perfringens B
           str. ATCC 3626]
 gi|168217979|ref|ZP_02643604.1| ribose ABC transporter, permease protein [Clostridium perfringens
           NCTC 8239]
 gi|18145292|dbj|BAB81335.1| probable ribose ABC transporter [Clostridium perfringens str. 13]
 gi|110673593|gb|ABG82580.1| ribose ABC transporter, permease protein [Clostridium perfringens
           ATCC 13124]
 gi|170661450|gb|EDT14133.1| ribose ABC transporter, permease protein [Clostridium perfringens E
           str. JGS1987]
 gi|170712549|gb|EDT24731.1| ribose ABC transporter, permease protein [Clostridium perfringens B
           str. ATCC 3626]
 gi|182379963|gb|EDT77442.1| ribose ABC transporter, permease protein [Clostridium perfringens
           NCTC 8239]
          Length = 311

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 93/312 (29%), Gaps = 27/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +++ +      S   I ++  Q+ +  + A G++ V+   G + L+     A
Sbjct: 15  LIGLVLLCIVITIVTPNFLSVSNITNVFTQVSVNAIIAIGMTFVI-LTGGIDLSVGSTLA 73

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I       +    G  ++L I V+A+I  A G+I GL   K +                 
Sbjct: 74  ISGAVGASIVKSTGN-VFLAIIVAAVIGIAVGLINGLLVSKGKLQ-------AFIVTLAT 125

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + I          G  ++             + F   P    I    +    L       
Sbjct: 126 MTIFRGATLVFTDGTPISKLPEAFVKIGNGKLGFMPIPVIITIIIAIIAVYAL------- 178

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +T        +  N+ A           K   + VS     +AG    +    
Sbjct: 179 ------SQTRFGRYLYALGGNEDASRLSGINTDKIKTLVYVVSGFASAIAGVIITSRIGS 232

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            SP+     E   + ++VI      GG  +++       I+  +      MN   F   +
Sbjct: 233 ASPNAGTGFELDAIAAVVIGGTSLAGGEGTITGTLIGALIIGVLNNGLNLMNVSPFYQSI 292

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 293 VKGLVILIAVLL 304


>gi|296331302|ref|ZP_06873774.1| ABC transporter (permease) [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305676288|ref|YP_003867960.1| urea ABC transporter permease protein UrtB [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296151417|gb|EFG92294.1| ABC transporter (permease) [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305414532|gb|ADM39651.1| urea ABC transporter, permease protein UrtB [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 300

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 90/309 (29%), Gaps = 17/309 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      I ++ A GL+I  G + ++++        GAY+  ++   +   +   +  
Sbjct: 8   LFNGISLGSILILIAIGLAITFGLMNIMNMAHGELIMAGAYTTYVVQQLFLSYLPAPLFS 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +            +    + + +  L    +   +      +   +A   +      
Sbjct: 68  YYFLIAIIMAFAVAALIGIVIEKVIVRRLYDRPLDSLLATWGVSLILQQAARSIFGAPNV 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V +     ++L  + F  A +  +L +T+     + +  N+ 
Sbjct: 128 AVK--SPEWLTGGVTLFSVTFPYKRLFILALVLFTLALLGFYLFKTSAGRRMQAVTLNRS 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L  ++      AFA+ S   G+AG+                S  +    IVILGG+
Sbjct: 186 MASCLGVSVRKTDTLAFALGSGLAGIAGSSLTLLGSI--GPTLGSSYLVDAFMIVILGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L         +  +                            ++   + L +  R   
Sbjct: 244 GKLKGTIIGAVTVGLLSTFVEYSTSATIAK-------------VVVFACIILFLQWRPSG 290

Query: 339 LLRLRTPSN 347
           L  +RT   
Sbjct: 291 LASVRTRLL 299


>gi|83950238|ref|ZP_00958971.1| ABC transporter permease protein [Roseovarius nubinhibens ISM]
 gi|83838137|gb|EAP77433.1| ABC transporter permease protein [Roseovarius nubinhibens ISM]
          Length = 297

 Score = 68.4 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 95/307 (30%), Gaps = 15/307 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     ++  + A GL+++ G +  ++L   + Y +G Y               +    
Sbjct: 1   MNGLQFGVLLFLIAAGLTLIFGIMDFVNLAHGVLYMVGGYLMAT----------FVALTG 50

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           +   G    +     +    +YL I  L        +L  +  +     G+ +      L
Sbjct: 51  SFTMGLLLALPTALVVGLALEYLVIRKLYHRSHLDQVLATFGLLMIITEGVKILWGSSPL 110

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +  L+         V Y I+   ++      +A + L +  T I    R    N+  
Sbjct: 111 SVPIPPLLDGAIPLIGQVKYPIYRLAIIATGLAAAAGLYLIVNHTRIGMLLRAGATNRNM 170

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   I       FA        AG   A      +         I+   +V++GG+ 
Sbjct: 171 VAALGVNISRLFRLVFAFGVMLACFAGMMVAPILSVDTGMGESIL--ILTFVVVVIGGIG 228

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMRS 336
           S+        ++  V  L           +     +  +  T    L+ I + +++  + 
Sbjct: 229 SIRGAFLGALLVATVDTLGGTFGPILLRMVFDPATASQVGRTLAPMLVYILMAIILFAKP 288

Query: 337 HSLLRLR 343
             L   +
Sbjct: 289 AGLFGRK 295


>gi|160895528|ref|YP_001561110.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160361112|gb|ABX32725.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 290

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 96/291 (32%), Gaps = 25/291 (8%)

Query: 53  AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112
           A GL+++ G +G+++L     Y IGAY    L    G     ++     ++   G  +  
Sbjct: 24  ASGLTLIFGIMGVINLAHGSFYMIGAYMAFALSPLLGQHFITMLLAGVALTVVLGYALEW 83

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
               +  +   +  ++M+     +  + + +  G     V          +   +     
Sbjct: 84  AFFSYLYEREHLQQVLMTFGLILVFEELRSLLAGNDVHGVP---------LPGWLSGSFS 134

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
               + Y  +  +       ++ ++   + RT +    R    N+     L   +     
Sbjct: 135 LGGLMSYPWYRLFASGVCLLVALALYWVVNRTRLGMMVRAGASNRDMVRGLGIDVKRLYR 194

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             FA+  A   +AG   A             +  II   +V++GG+ S++    A+ ++ 
Sbjct: 195 IVFAIGVALAALAGMIAAPMSSV--YPGMGGNVLIICFVVVVIGGIGSITGALLASLLVG 252

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            V                     F       + + + +V++ R   L+  R
Sbjct: 253 FVDTFGKLF--------------FQELSGMSVYLLMAVVLVGRPQGLMGQR 289


>gi|33597861|ref|NP_885504.1| putative branched-chain amino acid transport permease [Bordetella
           parapertussis 12822]
 gi|33602764|ref|NP_890324.1| putative branched-chain amino acid transport permease [Bordetella
           bronchiseptica RB50]
 gi|33574290|emb|CAE38623.1| putative branched-chain amino acid transport permease [Bordetella
           parapertussis]
 gi|33577206|emb|CAE35763.1| putative branched-chain amino acid transport permease [Bordetella
           bronchiseptica RB50]
          Length = 295

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 110/315 (34%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y M + GL+++ G L +++      Y +GA+   +  S
Sbjct: 4   LFGIPIQALLGQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMLGAFVAWMGLS 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL+ W+++ ++ ++ G  G+++    L+       +  L+++     ++        G
Sbjct: 64  YLGLNYWIMLILAPLVVGLFGILIEKLLLRHLYKLDHLYGLLLTFGLTLLIEGLFRSFYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F++   +  +V++    +  +    + RT +
Sbjct: 124 VSGQPYPTPEALRGAT----------NLGFMVLPNYRAWVVVASITVCLATWFVIERTRL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N +   +    +       +    A  G AG   A         +   +  
Sbjct: 174 GALLRAGTENPRLVEAFGVNVPRMITLTYGFGVALAGFAGVLAAPVLQI--SPLMGSNLI 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+         L  +  L                  +     T++ I
Sbjct: 232 IVVFAVVVIGGMGSIMGAIVTGLGLGVIEGLTKVF--------------WPEASNTVVFI 277

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L+R   L  
Sbjct: 278 IMAIVLLLRPAGLFG 292


>gi|17986675|ref|NP_539309.1| ribose ABC transporter permease [Brucella melitensis bv. 1 str.
           16M]
 gi|23502492|ref|NP_698619.1| ribose ABC transporter permease [Brucella suis 1330]
 gi|62290507|ref|YP_222300.1| ribose ABC transporter permease [Brucella abortus bv. 1 str. 9-941]
 gi|82700426|ref|YP_415000.1| inner-membrane translocator:voltage-dependent potassium channel
           [Brucella melitensis biovar Abortus 2308]
 gi|148559036|ref|YP_001259492.1| ribose ABC transporter permease [Brucella ovis ATCC 25840]
 gi|161619569|ref|YP_001593456.1| hypothetical protein BCAN_A1668 [Brucella canis ATCC 23365]
 gi|189024733|ref|YP_001935501.1| inner-membrane translocator [Brucella abortus S19]
 gi|225853099|ref|YP_002733332.1| hypothetical protein BMEA_A1683 [Brucella melitensis ATCC 23457]
 gi|237816014|ref|ZP_04595011.1| ribose ABC transporter permease [Brucella abortus str. 2308 A]
 gi|254689808|ref|ZP_05153062.1| hypothetical protein Babob68_06498 [Brucella abortus bv. 6 str.
           870]
 gi|254694300|ref|ZP_05156128.1| hypothetical protein Babob3T_06479 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254697951|ref|ZP_05159779.1| hypothetical protein Babob28_09650 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254702347|ref|ZP_05164175.1| hypothetical protein Bsuib55_16012 [Brucella suis bv. 5 str. 513]
 gi|254704876|ref|ZP_05166704.1| hypothetical protein Bsuib36_13343 [Brucella suis bv. 3 str. 686]
 gi|254730842|ref|ZP_05189420.1| hypothetical protein Babob42_06514 [Brucella abortus bv. 4 str.
           292]
 gi|256045247|ref|ZP_05448144.1| hypothetical protein Bmelb1R_12200 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256114199|ref|ZP_05454953.1| hypothetical protein Bmelb3E_15417 [Brucella melitensis bv. 3 str.
           Ether]
 gi|256258061|ref|ZP_05463597.1| hypothetical protein Babob9C_12103 [Brucella abortus bv. 9 str.
           C68]
 gi|256263412|ref|ZP_05465944.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2
           str. 63/9]
 gi|256370046|ref|YP_003107557.1| ribose ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|260547038|ref|ZP_05822777.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038]
 gi|260565160|ref|ZP_05835644.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1
           str. 16M]
 gi|260565886|ref|ZP_05836356.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40]
 gi|260755340|ref|ZP_05867688.1| monosaccharide-transporting ATPase [Brucella abortus bv. 6 str.
           870]
 gi|260758563|ref|ZP_05870911.1| monosaccharide-transporting ATPase [Brucella abortus bv. 4 str.
           292]
 gi|260762385|ref|ZP_05874728.1| monosaccharide-transporting ATPase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884358|ref|ZP_05895972.1| monosaccharide-transporting ATPase [Brucella abortus bv. 9 str.
           C68]
 gi|261214607|ref|ZP_05928888.1| monosaccharide-transporting ATPase [Brucella abortus bv. 3 str.
           Tulya]
 gi|261752911|ref|ZP_05996620.1| monosaccharide-transporting ATPase [Brucella suis bv. 5 str. 513]
 gi|261755571|ref|ZP_05999280.1| monosaccharide-transporting ATPase [Brucella suis bv. 3 str. 686]
 gi|265991676|ref|ZP_06104233.1| monosaccharide-transporting ATPase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265995514|ref|ZP_06108071.1| monosaccharide-transporting ATPase [Brucella melitensis bv. 3 str.
           Ether]
 gi|297248887|ref|ZP_06932605.1| ribose transport system permease [Brucella abortus bv. 5 str.
           B3196]
 gi|306843001|ref|ZP_07475629.1| ribose ABC transporter permease [Brucella sp. BO2]
 gi|17982295|gb|AAL51573.1| ribose transport system permease protein rbsc [Brucella melitensis
           bv. 1 str. 16M]
 gi|23348486|gb|AAN30534.1| ribose ABC transporter, permease protein [Brucella suis 1330]
 gi|62196639|gb|AAX74939.1| RbsC-2, ribose ABC transporter, permease protein [Brucella abortus
           bv. 1 str. 9-941]
 gi|82616527|emb|CAJ11605.1| Bacterial inner-membrane translocator:Voltage-dependent potassium
           channel [Brucella melitensis biovar Abortus 2308]
 gi|148370293|gb|ABQ60272.1| ribose ABC transporter, permease protein [Brucella ovis ATCC 25840]
 gi|161336380|gb|ABX62685.1| Hypothetical protein BCAN_A1668 [Brucella canis ATCC 23365]
 gi|189020305|gb|ACD73027.1| Bacterial inner-membrane translocator [Brucella abortus S19]
 gi|225641464|gb|ACO01378.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
 gi|237789312|gb|EEP63523.1| ribose ABC transporter permease [Brucella abortus str. 2308 A]
 gi|256000209|gb|ACU48608.1| ribose ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|260096088|gb|EEW79965.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038]
 gi|260151228|gb|EEW86322.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1
           str. 16M]
 gi|260155404|gb|EEW90484.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40]
 gi|260668881|gb|EEX55821.1| monosaccharide-transporting ATPase [Brucella abortus bv. 4 str.
           292]
 gi|260672817|gb|EEX59638.1| monosaccharide-transporting ATPase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675448|gb|EEX62269.1| monosaccharide-transporting ATPase [Brucella abortus bv. 6 str.
           870]
 gi|260873886|gb|EEX80955.1| monosaccharide-transporting ATPase [Brucella abortus bv. 9 str.
           C68]
 gi|260916214|gb|EEX83075.1| monosaccharide-transporting ATPase [Brucella abortus bv. 3 str.
           Tulya]
 gi|261742664|gb|EEY30590.1| monosaccharide-transporting ATPase [Brucella suis bv. 5 str. 513]
 gi|261745324|gb|EEY33250.1| monosaccharide-transporting ATPase [Brucella suis bv. 3 str. 686]
 gi|262766627|gb|EEZ12416.1| monosaccharide-transporting ATPase [Brucella melitensis bv. 3 str.
           Ether]
 gi|263002460|gb|EEZ15035.1| monosaccharide-transporting ATPase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263093425|gb|EEZ17475.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2
           str. 63/9]
 gi|297176056|gb|EFH35403.1| ribose transport system permease [Brucella abortus bv. 5 str.
           B3196]
 gi|306286824|gb|EFM58363.1| ribose ABC transporter permease [Brucella sp. BO2]
 gi|326409647|gb|ADZ66712.1| Bacterial inner-membrane translocator [Brucella melitensis M28]
 gi|326539351|gb|ADZ87566.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 334

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 94/314 (29%), Gaps = 20/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++   +L        +   I ++ +Q  I  + A G++ V+     + L+     
Sbjct: 27  IFIAFLLLATILSFSNEYFLTAGNISNVLLQTSINGILAIGMTFVI-LTRGIDLSVGSVV 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+         +   ++     P S  I+   G+++G+      G  ++   +       
Sbjct: 86  ALAGIVSASFATTSAMAGIAGAPYSPFIAICVGLLVGIGCGALVGTIVSRFAVPAFVATL 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +L   + +T    G      L      + +               + +   ++ +  + 
Sbjct: 146 GMLSAARGLTLIYGGGKPVPALVPDFRWIGT------------GNILGVPVPVILLAIVF 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L R+        +  N  A  +    I   + S + +S    G+AG   +A   
Sbjct: 194 LVSWWILNRSRFGRYIYAVGGNPHAANTSGINISRVRFSVYVISGGLAGLAGMILSARTG 253

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                    S  +  I+ V++      GG+  ++       I+  +      M    +  
Sbjct: 254 SA-LPQAGISYELDAIAAVVIGGTSLSGGIGRITGTLIGALIIGVMNNGLDLMGIQSYYQ 312

Query: 309 LLKFDCSFNMRHTT 322
            +            
Sbjct: 313 QVLKGALIVGAVML 326


>gi|302342737|ref|YP_003807266.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075]
 gi|301639350|gb|ADK84672.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075]
          Length = 302

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 87/294 (29%), Gaps = 2/294 (0%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           + + +       Y + A G ++V G L L++      + +GAY      + +   + L  
Sbjct: 6   QNVLNALQWGSFYALIALGYTLVYGVLSLINFAHGDIFMVGAYVAYFAATMFLGEVGLGP 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V+  +     M+     +    + +A   L      +  ++    +            L
Sbjct: 66  GVTLALIVPLTMLAT-ACVGVALERIAYRPLRRKGAHRLYVVITALMCGLILENGNLALL 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                +   L+    +  + +        V+       A +   + +T I  A R I  +
Sbjct: 125 GASRKSFPELVPTTVYAFAGLSVTNLKLAVIATAVAAFAVLHFIVTKTKIGLAMRGIAWD 184

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             A   +        +  F + S   G+AG  FA +   + P M             ++G
Sbjct: 185 SFAIPLMGVPPDRIIVFTFILGSGMAGLAGVMFAMAYPVLEPYM-GALIGWKAFIAAVIG 243

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           G+  +        +L  +      +       L+ F             +    
Sbjct: 244 GIGDIRGAFLGGFLLAFLEIGVAAVFPSTMRDLIAFSVLLVFMWQRPTGVFGVA 297


>gi|226306810|ref|YP_002766770.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226185927|dbj|BAH34031.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 347

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 90/304 (29%), Gaps = 23/304 (7%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               L+  +   GLS++ G+ GL +        +GA +  ++ + +G    + +  + ++
Sbjct: 64  LRFGLVIAIAGVGLSLIYGTTGLTNFAHGEMVTLGAVAAWVINTSFG----VPLIPATIL 119

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +   G+ +GL +       L      +       +     +        +          
Sbjct: 120 AIFVGIGIGLLTNGIVWKPLRKRKTGLIAQLVVSIGLAISLR-----YLILIFFSDRAEP 174

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                         +        V++    +   + L L++T I  A R + DN+    S
Sbjct: 175 FDDYQGQVEKNWGPIALTDANAIVMIVSLVVLVGVALLLQKTRIGKAMRAVSDNRDLAAS 234

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAAS-RDRISPDMFKFSENIIVISIVILGGMTSL 281
               +    +  + +      + G  F  S           F   +++ + + LGG+ + 
Sbjct: 235 SGINVERVIMFVWGLGGGLAALGGVLFGISELGGRVQWEMGFKLLLLMFAGITLGGLGTA 294

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   I+  +V+L   +       +        +                R   +L 
Sbjct: 295 YGALLGCVIVGLLVQLSTLIINPDLKYIGGLLVLIVILVV-------------RPQGILG 341

Query: 342 LRTP 345
            R  
Sbjct: 342 SRQR 345


>gi|119387519|ref|YP_918553.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119378094|gb|ABL72857.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 290

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 86/307 (28%), Gaps = 27/307 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ S      +Y + A G +I+  +  +++        +G        +         +
Sbjct: 6   QFLFSGLTVGAVYALVALGFTIIYNASDVVNFAQGEFVMLGGMITWFAHAAGLPLPLAAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                 +     I  L     RG  +    +I       +    + +             
Sbjct: 66  IAIVATAALGVAINKLAIEPARGAPVVSLIIITIGASVFLQGAAQLV------------F 113

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                +  +              +    +V+ G   + A + L+  RT +  A     +N
Sbjct: 114 DKQIHSFPAFSGDTPLRIGGATIQPQSLWVIGGALVVFAGLWLFFTRTLLGRAVLATSNN 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +     F    +FA+S+    +AG         ++         +   +  +LG
Sbjct: 174 RLAAQLVGINTNFVMTLSFALSAGIGALAGVLATP--ITLTAYNVGIGFALKGFAGAMLG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM +         ++  +  L  G     +     F             + + LV+    
Sbjct: 232 GMGNPKGALAGGFLIGLIEALTAGYLSSTYKEAAAF-------------VVILLVLFFMP 278

Query: 337 HSLLRLR 343
             L   +
Sbjct: 279 QGLFGRK 285


>gi|62317709|ref|YP_223562.1| branched-chain amino acid ABC transporter permease [Brucella
           abortus bv. 1 str. 9-941]
 gi|83269692|ref|YP_418983.1| inner-membrane translocator [Brucella melitensis biovar Abortus
           2308]
 gi|189022966|ref|YP_001932707.1| Bacterial inner-membrane translocator [Brucella abortus S19]
 gi|254691213|ref|ZP_05154467.1| Bacterial inner-membrane translocator [Brucella abortus bv. 6 str.
           870]
 gi|254695483|ref|ZP_05157311.1| Bacterial inner-membrane translocator [Brucella abortus bv. 3 str.
           Tulya]
 gi|254698999|ref|ZP_05160827.1| Bacterial inner-membrane translocator [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254732446|ref|ZP_05191024.1| Bacterial inner-membrane translocator [Brucella abortus bv. 4 str.
           292]
 gi|256256400|ref|ZP_05461936.1| Bacterial inner-membrane translocator [Brucella abortus bv. 9 str.
           C68]
 gi|260544950|ref|ZP_05820771.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038]
 gi|260756814|ref|ZP_05869162.1| branched-chain amino acid ABC transporter [Brucella abortus bv. 6
           str. 870]
 gi|260760245|ref|ZP_05872593.1| branched-chain amino acid ABC transporter [Brucella abortus bv. 4
           str. 292]
 gi|260763483|ref|ZP_05875815.1| branched-chain amino acid ABC transporter [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260882631|ref|ZP_05894245.1| branched-chain amino acid ABC transporter [Brucella abortus bv. 9
           str. C68]
 gi|261215871|ref|ZP_05930152.1| branched-chain amino acid ABC transporter [Brucella abortus bv. 3
           str. Tulya]
 gi|62197902|gb|AAX76201.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|82939966|emb|CAJ12995.1| Bacterial inner-membrane translocator [Brucella melitensis biovar
           Abortus 2308]
 gi|189021540|gb|ACD74261.1| Bacterial inner-membrane translocator [Brucella abortus S19]
 gi|260098221|gb|EEW82095.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038]
 gi|260670563|gb|EEX57503.1| branched-chain amino acid ABC transporter [Brucella abortus bv. 4
           str. 292]
 gi|260673904|gb|EEX60725.1| branched-chain amino acid ABC transporter [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260676922|gb|EEX63743.1| branched-chain amino acid ABC transporter [Brucella abortus bv. 6
           str. 870]
 gi|260872159|gb|EEX79228.1| branched-chain amino acid ABC transporter [Brucella abortus bv. 9
           str. C68]
 gi|260917478|gb|EEX84339.1| branched-chain amino acid ABC transporter [Brucella abortus bv. 3
           str. Tulya]
          Length = 298

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/274 (12%), Positives = 84/274 (30%), Gaps = 14/274 (5%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS-AMISGACG 107
           + + A GL+++ G + +++         G +   ++ ++ GL  +  + +    +     
Sbjct: 18  FAIVAVGLTLIFGIVKVVNFAHGEFLMAGMFVTWLITTKLGLHPYAAVIIVLPAMFILGA 77

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +   L            A +  +      +I    +  G                  +  
Sbjct: 78  LTQRLLIQPLMASDDGHAQIFATVGLSTAMINLALLIFGAD-----------IANTPNFG 126

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                    +       ++ LG   L  ++ L+L+ +    A R +  ++ A   +   +
Sbjct: 127 LRTPIEIGPLRVLTGQVFIFLGAIVLVVALQLFLKNSQTGRAIRAVAQHRSAAELMGVNV 186

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
               +  F + +A +G+A    A      S     F        +V+LGG+ S+      
Sbjct: 187 SRIYILCFGLGAACVGLAAVLIAPLYPTSSNIGTYFVL--TAFVVVVLGGLGSIPGAFVG 244

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             I+  +  +            + F     +   
Sbjct: 245 ALIIGVIDTMSGYYIGSDLREAVVFGIFLLILIL 278


>gi|319794457|ref|YP_004156097.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315596920|gb|ADU37986.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 298

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 89/309 (28%), Gaps = 23/309 (7%)

Query: 37  KYIDSMGIQILIYV----MFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             + ++ I  LIY     + A GL+++ G + +L++     YAIGAY        +    
Sbjct: 2   STLLTILIDGLIYGAWLFLVAAGLTLIFGVMKVLNIAHGNLYAIGAYVAATAMGYWFADR 61

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
                  A+  G   +      L      L                    + +       
Sbjct: 62  PPSFAAFAIQLGTAVVAGTALGLALDRGVLRRLRGRDEVSLALATYALLLVLDDVIQFVW 121

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                                 + + +  + + +L     +   +   L+RT        
Sbjct: 122 G---TSAYPASAPYGLLGSSEINGLRFNNYEFVLLAAAAAVGLLLWWLLQRTHTGRCLAA 178

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  + +   ++   +    L+ F + +    + GA  A                ++  ++
Sbjct: 179 IIRDPEMSAAMGINVERLYLATFMLGAVLAALGGALTAPMIQVA--PGLGAEVIVVTFAV 236

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           +++GGM S+   A    ++         +              F      ++   + LV+
Sbjct: 237 IVIGGMGSIPGAAVGALVVGLARAATIHL--------------FPFAEVFIVYAVMALVL 282

Query: 333 LMRSHSLLR 341
            +R   L  
Sbjct: 283 AVRPEGLFP 291


>gi|294677554|ref|YP_003578169.1| ribose ABC transporter permease [Rhodobacter capsulatus SB 1003]
 gi|3128358|gb|AAC16210.1| ribose transport system permease protein RbsC [Rhodobacter
           capsulatus SB 1003]
 gi|294476374|gb|ADE85762.1| ribose ABC transporter, permease protein [Rhodobacter capsulatus SB
           1003]
          Length = 357

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 87/313 (27%), Gaps = 18/313 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +L     +   +  G   S   +  +  Q+ I  + A   +++V + G + L+     
Sbjct: 49  VIVLVAAIAVFGIVAGGRFFSALNLSLILQQVSIIGILAAAQALIVLTAG-IDLSVAAIM 107

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +     L    G+   L + V+     A G+  G    K +           S  F 
Sbjct: 108 VLMSVIAGNLAVYMGVPPVLALAVAFAGGAAAGLANGFLITKVKLPPFITTLGTWSIFFS 167

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L                 +        ++      +   F      + Y  L M  + 
Sbjct: 168 LNL------------WLSGAQSIRSQDIDKAAPLLKFWGEGFAFAGAKITYGSLLMIAVF 215

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L +TA       + D+++A            LS + ++     +A         
Sbjct: 216 LGLWYLLNKTAWGRHVHAVGDDKEAAELAGIQADRVLLSVYGLAGFICAIAAWASIGRVG 275

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            ISP  F       + ++V+      GG  S+        I+          N      +
Sbjct: 276 SISPQSFYEGNLQSITAVVVGGISLFGGRGSILGALFGALIVGVFQSGLRLANVDVLWQV 335

Query: 310 LKFDCSFNMRHTT 322
                   +    
Sbjct: 336 FAIGWLIIVAVAI 348


>gi|71905893|ref|YP_283480.1| inner-membrane translocator [Dechloromonas aromatica RCB]
 gi|71845514|gb|AAZ45010.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Dechloromonas aromatica RCB]
          Length = 304

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 93/305 (30%), Gaps = 13/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +        + A S V    +       +I  
Sbjct: 8   LIGGLLSGVMYALVALGFVMIYKASGVFNFAQGAMVYLAALSVVGCMEKGAPLWLAIILA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+++            K          +          I       G A +        
Sbjct: 68  FAIMTVFGIATEKFVLRKLVNQPPIALFMAT--------IGLAFFIEGVAPMIFGSEPRA 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   +      +   +  ++   F          L A++ L+ + T I  A R + D+ +
Sbjct: 120 LELGIVDEPIPWILDNWNMVISKFDLVAAGVAAVLVATLALFFQYTRIGRALRAVADDHQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +       + V+     +AG  + A         F     +  + ++ILGG 
Sbjct: 180 AALSIGIPLQHIWAIVWGVAGFVALVAGMMWGARNGVQFALTFT---ALKALPVLILGGF 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+    +L           L  F  +F         +   L +L+R   
Sbjct: 237 TSVPGAIVGGLIIGASEKLAEIYIPPVMQDL--FGGNFGGIEGWFPYVLALLFLLVRPEG 294

Query: 339 LLRLR 343
           L   +
Sbjct: 295 LFGEK 299


>gi|110680755|ref|YP_683762.1| branched-chain amino acid transport system permease component,
           putative [Roseobacter denitrificans OCh 114]
 gi|109456871|gb|ABG33076.1| branched-chain amino acid transport system permease component,
           putative [Roseobacter denitrificans OCh 114]
          Length = 308

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 96/301 (31%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   ++V+ A GL+I+ G +G++++       +GAY   +  + +   I  L  +   +
Sbjct: 22  LILFSVFVLMALGLAIIFGQMGVINMAHGEFMILGAYMTYLTSTLFQAYIPGLFSIYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     I       F      +   +       +L  W      +           +G T
Sbjct: 82  AMIIAFIASGLLGLFVEWA--MIRHLYKRPLDTLLATWGLSLILQQVYRSIFGAREVGVT 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +      +  V   I   +V++    +S  +   + R++     R I  N+    +
Sbjct: 140 IPDWMMGSLPLTDLVEVPINGVFVMVLAVTISLGVYYLMYRSSWGLQVRAISQNRVMADA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +     +     F +     G+AG+ F       +         +    +V+ GG  SL 
Sbjct: 200 VGINTAWTDRLTFGIGCGVAGVAGSAFTMIGS--TGPTAGQLYIVDTFLVVVFGGAGSLI 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     +                         L ++ +  ++++R   L  L
Sbjct: 258 GTIASAFSISQAQSIMEFFLSGSMAK-------------VLTLLVVVGILMVRPQGLFSL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|89053865|ref|YP_509316.1| inner-membrane translocator [Jannaschia sp. CCS1]
 gi|88863414|gb|ABD54291.1| mannose ABC transporter membrane protein / fructose ABC transporter
           membrane protein / ribose ABC transporter membrane
           protein [Jannaschia sp. CCS1]
          Length = 350

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 85/310 (27%), Gaps = 18/310 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L     +   L      S   +  +  Q+ I  + A   S+V+ + G + L+     
Sbjct: 42  LMVLISAVIVFALLLGDRFLSPFALTLILQQVQIVGIVALAQSLVILTAG-IDLSVGAVM 100

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I +        RYGL   + I         CG I G      +                
Sbjct: 101 VISSVVMGQFTFRYGLPPEIAILCGLACGALCGFISGCLVAIVKLPPFI----------- 149

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    I      +Y  +                 F     I      Y ++ M  L+
Sbjct: 150 -VTLGMWQIVLAANFLYSRNETIRSQDIEAEAGILQFFGERLEIGGAIFTYGVIFMLVLA 208

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   LR TA       + D+ +A       +    +S + ++      AG        
Sbjct: 209 VVLAYALRFTAWGRHVYAVGDDPEAAELSGVNVKRTLISVYMLAGLICAFAGWALIGRIG 268

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   + +    + ++VI      GG  S+        I+                + 
Sbjct: 269 SVSPTSGQLANIESITAVVIGGISLFGGRGSIMGALFGALIVGVFTLGLRLAGADPQWTN 328

Query: 310 LKFDCSFNMR 319
           L         
Sbjct: 329 LLIGLLIIAA 338


>gi|15966339|ref|NP_386692.1| putative high-affinity branched-chain amino acid transport permease
           ABC transporter protein [Sinorhizobium meliloti 1021]
 gi|307307809|ref|ZP_07587538.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
 gi|307317471|ref|ZP_07596911.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|15075610|emb|CAC47165.1| Putative high-affinity branched-chain amino acid transport permease
           ABC transporter [Sinorhizobium meliloti 1021]
 gi|306897060|gb|EFN27806.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|306901675|gb|EFN32277.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
          Length = 296

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/305 (16%), Positives = 89/305 (29%), Gaps = 22/305 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++  +      Y + A GL I+ G L L++        +  Y+  +        I + +
Sbjct: 6   QFVIDVLSLGGAYALMALGLVIIYGILRLVNFAYGELIMVAGYTMFLASGSGLPWIVMAV 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +  ++   G+I    + +        A LI S  F N+L     +        V    
Sbjct: 66  L-AVGMAILFGIITDYAAFRPVRAKSVTAVLITSFAFSNLLQNAALLFISPRPRNVPLP- 123

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     I          I  +     +     L A +   +RRT +  A R    N
Sbjct: 124 ---------DIFSQTVSIGGAITPVRNLITIAASIALLAGVAFLMRRTTLGIAMRAAATN 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 L         SAFA+S    G+ G  +      +          ++     ++G
Sbjct: 175 FTMARMLGVPANLIISSAFALSGFLAGVVGILWIGRIGTV-VPGIGLEPLLVAFIATVIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM SL        +L  +                                 + L++L R 
Sbjct: 234 GMRSLPGAVVGGFLLALIDTTLNY----------TLSQDLLKFRDAFTFSLVILILLWRP 283

Query: 337 HSLLR 341
             L+R
Sbjct: 284 DGLIR 288


>gi|116750820|ref|YP_847507.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
 gi|116699884|gb|ABK19072.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
          Length = 304

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 51/307 (16%), Positives = 107/307 (34%), Gaps = 13/307 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +  +++ + A GL+I+ G + +++        +G Y+ ++     GL   L+IPV
Sbjct: 8   LVAGLLIGMLFALIALGLTIIFGMMDIVNFAHGEFLMLGMYTALLTSQASGLDPLLMIPV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +  A G+            Y  +  L+   +   +L  +  +   +    +      
Sbjct: 68  AGAVGYALGVACY---------YGFVKFLLRGPMVAQLLGTFGLMLFLRNLALLLFGSED 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L+         V+         +      A++ L + RT    A      N++
Sbjct: 119 RTIHSGVLVNRAFDLGMGVVVPATKLAGAVMAVISFAAVWLLMHRTRTGKAMVATALNRQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +  +       A+ + +A + +AGA                   +I  +IV LGG 
Sbjct: 179 GARYMGISTERMNGLAWGIGAATVTIAGALLV--NFWSVTPYVGLLFTMIAFAIVALGGF 236

Query: 279 TSLSKIAKATAILIGVVEL--CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
            S+     A  I+  + E+        Y   S      S      T + +A FL++L+R 
Sbjct: 237 GSVPGAFFAGLIVGLITEIPGFWDFFTYLTGSSWMAGISMTPFKYTWVYLAYFLIMLIRP 296

Query: 337 HSLLRLR 343
             L   +
Sbjct: 297 RGLFGWK 303


>gi|158315657|ref|YP_001508165.1| inner-membrane translocator [Frankia sp. EAN1pec]
 gi|158111062|gb|ABW13259.1| inner-membrane translocator [Frankia sp. EAN1pec]
          Length = 704

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 56/301 (18%), Positives = 112/301 (37%), Gaps = 10/301 (3%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L     +++F  + A+   +       QI  + + A     + G  G +SL  +    IG
Sbjct: 310 LVFAGAIVVFGIVLASVLGEGDLITYGQIFSFGVIALSYVPLAGYAGQISLCQLSMAGIG 369

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +            +  + +ISGA G ++ LP+L+  G YLA+ T   + I    +
Sbjct: 370 A---AVWAHMGADGGIWALAATVVISGAAGALVALPALRLSGVYLALGTAAFAVILDRWI 426

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                     A I + D      +               +     +         L+   
Sbjct: 427 FTLPAFDLFGAKISLYDGGTVDVSGPSLFGWH-------LDSGSELMVFSAVWLALTTLA 479

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           + WLRR         +RD++ A+ +L   ++ +K++ FA+S+   G+ GA +   +  ++
Sbjct: 480 VAWLRRGRFGRQLIALRDSEAAYATLGGNLLRSKVAVFAMSAGIAGLGGALYGMQQRSVT 539

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            + F     + +  I ++GG+TS+     + A L G   +      +  N          
Sbjct: 540 AEQFGLVAGLPLFLIAVIGGLTSVGNGLFSGAALGGSFPVISAAGTFAQNITSVLPGLAG 599

Query: 318 M 318
           +
Sbjct: 600 L 600



 Score = 42.2 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 28/262 (10%), Positives = 70/262 (26%), Gaps = 10/262 (3%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                IY +   GL +   + G+ +     A  + A+ Y  L   +GL + + + +   +
Sbjct: 12  LSTAAIYAIIGSGLVLTYTTTGVFNFAHGAAGMMAAFVYWQLTEGWGLPVPIALVLVLAV 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 ++    +      L  A          +++    ++   A            + 
Sbjct: 72  LAPGFGLLVERVVLRPVQGLGEAE--------RLVMTVAMLSGLIAVARWIWDPNEARSL 123

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                                   ++    ++  + + L  T I    R   D++     
Sbjct: 124 PTFFADRAAIDIGPATITWHQALTMIVAVAVAIGLRVLLYGTRIGAEMRASVDDRALVGL 183

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                + +   A+ + +    + G   A S              +   +  I G + SL 
Sbjct: 184 TGANPVRSNQVAWILGTQLAAIGGILIAPSVSL--DAGQLSLLIVSAYTAAIFGRLRSLP 241

Query: 283 KIAKATAILIGVVELCCGMNFY 304
                  ++  +     G    
Sbjct: 242 LTFLGAVVVGCLESYLTGYLPS 263


>gi|254428813|ref|ZP_05042520.1| amino acid or sugar ABC transport system, permease protein,
           putative [Alcanivorax sp. DG881]
 gi|196194982|gb|EDX89941.1| amino acid or sugar ABC transport system, permease protein,
           putative [Alcanivorax sp. DG881]
          Length = 313

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/317 (15%), Positives = 106/317 (33%), Gaps = 24/317 (7%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +  L+  M + GL+++   +G+L+      Y +GAY          +  W  + ++
Sbjct: 10  LNGILYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYVAY--SLGMVVGFWPALFLA 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            ++ G  G ++    L+   +   +A L+ +     ++ +   +  G   +   +     
Sbjct: 68  PLVVGLLGALVEKYGLRRVHENGHVAELLFTFGLAYVINELVQLIWGPVSVAYREPA--- 124

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                  +R   F      Y IF   V+L    +  ++   L++T +    R    +   
Sbjct: 125 ------YLREPLFTLMGTDYSIFRGGVILISALMLVALWYLLKKTRVGLMVRASLTHGNM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L   +    +  F    A  G+AG                    + V+ +  +GGM 
Sbjct: 179 VGHLGHNVPRLFMGVFGFGCALAGLAGVMGGPLLATEPGMAESLGPIVFVVVV--VGGMG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM-----------VIAL 328
           SL     A+ ++  +      MN    + L     + +                   I L
Sbjct: 237 SLLGAFYASLLIGLIQTFFVAMNASVGDLLNGIGMNVDPYGEITGITLASLAPMTPFILL 296

Query: 329 FLVILMRSHSLLRLRTP 345
            L+++ R   L+    P
Sbjct: 297 VLILIFRPRGLMGELEP 313


>gi|253700890|ref|YP_003022079.1| inner-membrane translocator [Geobacter sp. M21]
 gi|251775740|gb|ACT18321.1| inner-membrane translocator [Geobacter sp. M21]
          Length = 291

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 101/305 (33%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++      + +GA+  ++L S + +++++ I  
Sbjct: 6   LVNGVALGSVYALIALGYTMVYGIITLINFAHGEIFMVGAFIGLLLVSFFKVNVFVAIVG 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+++ L + +       ++ LI +      L     +  G            
Sbjct: 66  AMIFCMIMGVLIELIAYRPLRKSSRLSALISAIGVSIFLSSLALMVFGADAKGFP----- 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                       +              ++     L  ++   +++T I  A R   ++  
Sbjct: 121 -----DGAFPVHQIQVGSADISTLQLLIIGVAAALMMALEFIVQKTKIGKAMRATSEDYN 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       FA+ SA     G       + +S +M      +   +  +LGG+
Sbjct: 176 TAALMGINVNRVISFTFALGSALAAAGGVLVGVLFNAVSFNM-GLMAGLKAFAAAVLGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+                  G      + +      ++     +    L LV+L++   
Sbjct: 235 GSIPGAML-------------GGLLLGVSEVFGVAIGYSSYRDAIAFTILVLVLLVKPTG 281

Query: 339 LLRLR 343
           LL  +
Sbjct: 282 LLGQK 286


>gi|170744527|ref|YP_001773182.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168198801|gb|ACA20748.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 291

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 75/297 (25%), Gaps = 26/297 (8%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            +Y + A G  ++  +  +++        + A+  V+         WL   ++       
Sbjct: 16  AVYALVALGFVLIFRATNVVNFAQGEFSMVAAFLMVVFAVDLEWPYWLSFLLAIGGMALL 75

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G +  L           +  +I +      L        G     +              
Sbjct: 76  GALFNLGVYYPLRHRSYLPVIISTIGASIFLANTTLALYGPQPQVLPPVFET-------- 127

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                     V  +     ++     L A    +   T I    +    +++    L   
Sbjct: 128 ---QGILLGPVFLDSQYLLIIAVTAVLVAFQYWFFEHTLIGKKLQATSQDKEMAALLGIP 184

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +    +  F  S+   G+AG   A             +  +   +  I+GG   ++    
Sbjct: 185 VAGMIMLTFVYSAVLGGIAGILVAPVLFV--SIQMGATIALKAFAATIIGGFGDVTGAII 242

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
               L  +           +     F             I L   +++R   L   R
Sbjct: 243 GGLALGIIETFGAAYISVPYKDAFAF-------------IVLVAFLILRPQGLFGER 286


>gi|148558195|ref|YP_001258041.1| branched-chain amino acid ABC transporter permease [Brucella ovis
           ATCC 25840]
 gi|148369480|gb|ABQ62352.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ovis ATCC 25840]
          Length = 315

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 53/324 (16%), Positives = 105/324 (32%), Gaps = 38/324 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             +     +        +   +  +    LI    A   +I+ G  G  S    + Y +G
Sbjct: 6   ALLAIIAAVLALGAPLFAFPVMMQLMFDALIIATLAQAWNIIGGFTGYASFGNSVFYGLG 65

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   I   ++ L  +    +  + +    M++GLP L+ +G Y AIA L + ++   I 
Sbjct: 66  AYGAGIAMVQFNLPFFAGAAIGIVAAVVFAMLIGLPILRLKGHYFAIAMLALPQVMAAIT 125

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                                    V             +  + F Y   L +  ++  +
Sbjct: 126 AN-----------------------VPVAGENIGLVLPLLNNDTFFYESALILLIIATCV 162

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  L R+        IR+N++   ++       K+ A  +S AF  MAGA  A     + 
Sbjct: 163 VALLTRSRFGFGLIAIRENEEGAAAMGINTTLYKILALMLSGAFCAMAGALQAYKITFLD 222

Query: 258 PDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P+       N+ +I + + GG  ++         L  V                    ++
Sbjct: 223 PEAAYQVQLNVQMIIMAVFGGAGTIFGPVFGALFLQWVSNWLST--------------AY 268

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
                    I + + +++    L 
Sbjct: 269 TDVAGMFFGIVIVVAVVLMPRGLA 292


>gi|115350133|ref|YP_771972.1| inner-membrane translocator [Burkholderia ambifaria AMMD]
 gi|172059154|ref|YP_001806806.1| inner-membrane translocator [Burkholderia ambifaria MC40-6]
 gi|115280121|gb|ABI85638.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia ambifaria AMMD]
 gi|171991671|gb|ACB62590.1| inner-membrane translocator [Burkholderia ambifaria MC40-6]
          Length = 294

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 105/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL  W ++ ++ ++ GA G+++    L++      +  L+++     ++        G
Sbjct: 63  YLGLPYWAMLALAPLLVGAFGILVERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSVYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 123 SSGQPYDVPSQLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +                     +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSIITGLMLGVIEGFTRVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L+R   L  
Sbjct: 277 IMAIVLLIRPAGLFG 291


>gi|149175856|ref|ZP_01854474.1| sugar ABC transporter permease protein [Planctomyces maris DSM
           8797]
 gi|148845303|gb|EDL59648.1| sugar ABC transporter permease protein [Planctomyces maris DSM
           8797]
          Length = 327

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 91/313 (29%), Gaps = 18/313 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K    + +L +   ++         S   + ++     ++ + + G++ V+   G + L+
Sbjct: 2   KKILGILILLIFVCIVTAASNEHFFSAYNMQNVIRLTSLFGIISIGVAFVI-ISGGIDLS 60

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +       L     + + L +  SA++S   G+  GL   K +     +     
Sbjct: 61  IGSVICLVGSLLPYLIMEMSVPVPLALLFSAVLSIVIGLSHGLLITKLKLQPFIVTLCG- 119

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                              GI       F  T            +   +    +    L 
Sbjct: 120 ----------LLIYRGIARGITEDQTQGFGATHDSLRYLATGKINIPFLEGFRLPVPFLI 169

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           M  ++      L +T      + I +N+ A            + A+ + S   G+ G  F
Sbjct: 170 MIGVALIAAFLLNKTIFGRYLKAIGNNEAAARYSGINTDLTVIMAYVICSFLAGLGGVLF 229

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNF 303
           A   + + P+       +  I+  +LGG        S+  +    A++  +      +  
Sbjct: 230 ALDINSVQPEGIGNFYELYAIAAAVLGGCSIRGGEGSILGVVIGAALMRVLRNSITMLGI 289

Query: 304 YYFNSLLKFDCSF 316
                        
Sbjct: 290 PSQLEFAIIGAVI 302


>gi|120612461|ref|YP_972139.1| inner-membrane translocator [Acidovorax citrulli AAC00-1]
 gi|120590925|gb|ABM34365.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 295

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 103/303 (33%), Gaps = 27/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + ++  Q+ +  + A GL+IV G + +++L       +GA++  +L    G   + L  V
Sbjct: 8   LLNVLSQVAVLALVALGLAIVFGMMDIVNLAHGEFVTLGAFTLAVLQGAGGAQAYWLALV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A I GA   +    S+     +  + TL+ +     I+ K   I  GK    V   L  
Sbjct: 68  IAPIVGAVAGLALEASVIRFLYHRTLDTLLATYAVSLIIQKLLEIGFGKHPQMVYTPLA- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                               Y  +  +V++    + A+  L   RT      R +  N  
Sbjct: 127 -----------GSVSVLGASYPSYRLFVIVASIVVIAACALAFTRTRFGLHLRAVIQNPS 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L          AFA  +A    AG   A      S      +       ++++GG+
Sbjct: 176 MSSALGIDTRHMNRLAFACGAALAAFAGVLVAPLVSVESH--LGMAYLGKAFFVIVVGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+      + ++     L          S              ++++   +VI +R   
Sbjct: 234 GSVLGAVTGSVLIGSTETLLNYHIDPSMASA-------------VVLLLAIVVIRLRPRG 280

Query: 339 LLR 341
           L+ 
Sbjct: 281 LVP 283


>gi|311108063|ref|YP_003980916.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310762752|gb|ADP18201.1| inner-membrane translocator 51 [Achromobacter xylosoxidans A8]
          Length = 294

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 90/306 (29%), Gaps = 23/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I S       Y +   GL++   +  +L+         GA    ++          +   
Sbjct: 8   IVSGLSVGAAYALIGLGLNLTFWTTRVLNFGQGSVLMAGAMLTAVMVGAGVNVFLAVGVS 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +    ++  +     R    ++  ++ +      L        G   +   D L+ 
Sbjct: 68  LLATAFILWVVEVVGVRPTRRVAGSMGWVVSTLGIGIFLQGVASWLFGTQAVAFPDVLFS 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              TV                 +    V +    +   + L+LR +      R +  ++ 
Sbjct: 128 STDTV---------EFMGAYISLQYIAVFVISVMIVGLMELFLRHSIWGYGVRAVAHDRD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    + +F VS    G+AG   +     + P+ F     I+     ++GGM
Sbjct: 179 LASLMGIPVYRVVVFSFLVSGVLAGIAGILVSQVSGTVDPN-FGLHLLILAFVAAVMGGM 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         IL  + +L  G        ++ F             + L  V+ +R   
Sbjct: 238 GSAFGSLVGGLILGILEKLVGGYVSPAAAEVVAF-------------VLLIGVLTIRPQG 284

Query: 339 LLRLRT 344
           L   R 
Sbjct: 285 LFGKRE 290


>gi|307947500|ref|ZP_07662833.1| high-affinity branched-chain amino acid transport system permease
           protein LivH [Roseibium sp. TrichSKD4]
 gi|307769318|gb|EFO28546.1| high-affinity branched-chain amino acid transport system permease
           protein LivH [Roseibium sp. TrichSKD4]
          Length = 290

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 104/310 (33%), Gaps = 27/310 (8%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y+    +   IY + A G+++V   L    L       +GA+    + +  G+S +
Sbjct: 6   LLNFYVIPGIVLGSIYALGAVGITLVFAILRYAHLAHGDLATLGAFIAFAVVTAVGVSPY 65

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + +PV+ + +    + +     +   +   I T+I S     ++     +  G       
Sbjct: 66  VALPVAVVATAFIAVGIDKVFYEHLRERPKIITVIASLGIALMVRAVVQVVWGVDSESYV 125

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             +          IR                + +L M     ++ ++L+++    A R +
Sbjct: 126 RGISRPDVYFGLRIRDREI------------FTVLAMLAFVGALYVFLKQSKWGKAMRAM 173

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            DN               +  + ++      A  F   + +     M  +   + + +  
Sbjct: 174 SDNPNLALLSGIDNRVVVMLTWVIAGGLCAAASVFLGINTEL--KSMMGWHMLLPMFAAA 231

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ILGG+  +        I+    EL   +    + + + F             + L +++L
Sbjct: 232 ILGGVGRVEGAVLGGLIVGVAEELSVLVLPSEYKAAMAF-------------VILLIMLL 278

Query: 334 MRSHSLLRLR 343
           +R   LLR +
Sbjct: 279 VRPTGLLRGK 288


>gi|256061676|ref|ZP_05451815.1| hypothetical protein Bneo5_15135 [Brucella neotomae 5K33]
 gi|261325686|ref|ZP_05964883.1| monosaccharide-transporting ATPase [Brucella neotomae 5K33]
 gi|261301666|gb|EEY05163.1| monosaccharide-transporting ATPase [Brucella neotomae 5K33]
          Length = 334

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 94/314 (29%), Gaps = 20/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++   +L        +   I ++ +Q  I  + A G++ V+     + L+     
Sbjct: 27  IFIAFLLLATILSFSNEYFLTAGNISNVLLQTSINGILAIGMTFVI-LTRGIDLSVGSVV 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+         +   ++     P S  I+   G+++G+      G  ++   +       
Sbjct: 86  ALAGIVSASFATTSAMAGIAGAPYSPFIAICVGLLVGIGCGALVGTLVSRFAVPAFVATL 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +L   + +T    G      L      + +               + +   ++ +  + 
Sbjct: 146 GMLSAARGLTLIYGGGKPVPALVPDFRWIGT------------GNILGVPVPVILLAIVF 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L R+        +  N  A  +    I   + S + +S    G+AG   +A   
Sbjct: 194 LVSWWILNRSRFGRYIYAVGGNPHAANTSGINISRVRFSVYVISGGLAGLAGMILSARTG 253

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                    S  +  I+ V++      GG+  ++       I+  +      M    +  
Sbjct: 254 SA-LPQAGISYELDAIAAVVIGGTSLSGGIGRITGTLIGALIIGVMNNGLDLMGIQSYYQ 312

Query: 309 LLKFDCSFNMRHTT 322
            +            
Sbjct: 313 QVLKGALIVGAVML 326


>gi|297565970|ref|YP_003684942.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
 gi|296850419|gb|ADH63434.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
          Length = 297

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 100/308 (32%), Gaps = 20/308 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ S      IY + A G  ++  S  +++       AIGA++   L +   L  WL  
Sbjct: 6   QFLISGIAVGSIYALAALGFVLIYKSSRVINFAHGQFIAIGAFAAYALATWAKLPFWLAA 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ + +   G  +    LK       I+ ++++    ++L     +T   +G +     
Sbjct: 66  LLAILATAFLGFAVEKIFLKRMVGQPIISVIMVTIGLASVLDGLMYLTPFGSGNFSYPAF 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             + +         +            + +R+ +  + R + D+
Sbjct: 126 LPQEP----------LRLAGITISYPQLLAIGFTALFLLLFGWFFQRSTLGISMRAVADD 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           Q A  S+  ++      A+AV+      AG             +        V   VILG
Sbjct: 176 QMASMSVGVSVERVFALAWAVAGLTAAAAGIVVGTVSGLNQDGLIGIGL--AVFPAVILG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+         +  + +L  G    Y                 L  + L +++  + 
Sbjct: 234 GLDSIPGAVVGGVTIGVLQQLAAGYLNQYVPG--------GGTEYVLPFVVLLVMLWFKP 285

Query: 337 HSLLRLRT 344
           + L  +  
Sbjct: 286 YGLFGIEE 293


>gi|158315052|ref|YP_001507560.1| ABC transporter related [Frankia sp. EAN1pec]
 gi|158110457|gb|ABW12654.1| ABC transporter related [Frankia sp. EAN1pec]
          Length = 959

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 112/312 (35%), Gaps = 19/312 (6%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +Q     +   IL Y + A  ++++ G  G LSL  +    +GA +   L     L
Sbjct: 336 PVVVTQPSRHLLYTIILGYAICAASVTVLTGWAGQLSLGQMAFAGLGALTAAALFRGLRL 395

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              +     A+ +      + + ++        I    +      + +            
Sbjct: 396 D--IGDTSLAINALPFPAAVLIATVLTAAIAAVIGLGALRVHGLLLAVSTFAFAVAAEQF 453

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                ++    +  +           +  +   YYV+L    +  +++  LR++ I+   
Sbjct: 454 LYRREVFHDEGSSAASFTRGTLFGIDIASQRTYYYVVLVTLAIVMAVVSRLRKSGIARTT 513

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF--SENII 268
             +RDN     +   +    KL AFA++ A  G+ GA  A +   +  +   F   ++++
Sbjct: 514 IGVRDNPTTAAAYTVSATGVKLRAFALAGALAGLGGALLAGALQTVPYNDMYFRSPDSLV 573

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           ++SIV++GG+ S+      +  +IG+                 F    ++       + L
Sbjct: 574 LVSIVVIGGLGSVYGPLLGSLWVIGLP---------------SFMPDNDIVPLLCSSMGL 618

Query: 329 FLVILMRSHSLL 340
            +++L     L+
Sbjct: 619 LVLLLYFPGGLV 630



 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/263 (11%), Positives = 79/263 (30%), Gaps = 9/263 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       L+  + A G+ +V  +  +++        +G+    +L  RY +  W+ +  
Sbjct: 9   LFDGATTGLVIGLLAVGIVLVNRATRIINFAVANMGLVGSALCALLVVRYNVPYWIGLAA 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G I+ +  ++       +  L+ +     + +               D    
Sbjct: 69  ALAAGALFGAIIHVGVIRRLFTAPRVIVLVATIGVSQLALTIV--------NAYPDLKDH 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +          P   V        +L+ +  ++A + L+L RT +    +   DN +
Sbjct: 121 ADQSYPVPWSGTWSPVDGVQVTGAQLSILVVVPVVTAGLSLFLNRTVLGKTVKASADNPE 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-ISPDMFKFSENIIVISIVILGG 277
                        L+ +  +     ++    AA             +  +  ++  ++  
Sbjct: 181 LARLQGINPKTISLAVWTAAGFLGTLSMILVAAQEKSLAQVTTLGPTTLLRALAAAVIAR 240

Query: 278 MTSLSKIAKATAILIGVVELCCG 300
           M S+     A   L  +      
Sbjct: 241 MVSVRIALVAGIGLGLLQSFVQF 263


>gi|239813803|ref|YP_002942713.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239800380|gb|ACS17447.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 327

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 122/329 (37%), Gaps = 29/329 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  +    +L   +          +  +  L   + A   +I+ G  G  S    + +  
Sbjct: 8   LAGIALFAVLVGCVPLATKSGVALNFVMMALYATLIAQAWNILGGFGGQFSFGHALFFGT 67

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQ 134
           GAY   I   + G++ W  +P++   +   G+ +G  S +   +G Y A+ TL  +E+F+
Sbjct: 68  GAYIQAIAQLQGGINAWAALPLAVAGAAGVGLFVGALSFRYGLKGSYFALVTLAFAEVFR 127

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +     T G  G+ V  R         S                   +++L M  L+
Sbjct: 128 ILALS-VNFTGGGVGLMVPLRESAANLQFASR--------------AGYLWLVLAMVVLA 172

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +  WLR        + +RDN+ A  ++       KL+A  +S+AF+G AGAF+     
Sbjct: 173 LLVTCWLRNGRFGAYLQAVRDNEDAARAVGVNPFRVKLAAIGLSAAFMGAAGAFYVQVFQ 232

Query: 255 RISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
            I     +  + ++  +   I+GGM +L         L  + +L   +            
Sbjct: 233 YIDAGIAYGPAVSVEALVAAIVGGMGTLWGPVLGAVALHLLSDLTRNLFG---------- 282

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 +  +    L ++++     +  L
Sbjct: 283 -ELPGINMVIYGTVLVVIVIFLPRGVAGL 310


>gi|168213598|ref|ZP_02639223.1| ribose ABC transporter, permease protein [Clostridium perfringens
           CPE str. F4969]
 gi|170714908|gb|EDT27090.1| ribose ABC transporter, permease protein [Clostridium perfringens
           CPE str. F4969]
          Length = 311

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 94/312 (30%), Gaps = 27/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +++ +      S   I ++  Q+ +  + A G++ V+   G + L+     A
Sbjct: 15  LIGLVLLCIVITIVTPNFLSVSNITNVFTQVSVNAIIAIGMTFVI-LTGGIDLSVGSTLA 73

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I +     +    G  ++L I V+A+I  A G+I GL   K +                 
Sbjct: 74  ISSAVGASIVKSTGN-VFLAIIVAAVIGIAVGLINGLLVSKGKLQ-------AFIVTLAT 125

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + I          G  ++             + F   P    I    +    L       
Sbjct: 126 MTIFRGATLVFTDGTPISKLPEAFVKIGNGKLGFMPIPVIITIIIAIIAVYAL------- 178

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +T        +  N+ A           K   + VS     +AG    +    
Sbjct: 179 ------SQTRFGRYLYALGGNEDASRLSGINTDKIKTLVYVVSGFASAIAGVIITSRIGS 232

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            SP+     E   + ++VI      GG  +++       I+  +      MN   F   +
Sbjct: 233 ASPNAGTGFELDAIAAVVIGGTSLAGGEGTITGTLIGALIIGVLNNGLNLMNVSPFYQSI 292

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 293 VKGLVILIAVLL 304


>gi|317121365|ref|YP_004101368.1| inner-membrane translocator [Thermaerobacter marianensis DSM 12885]
 gi|315591345|gb|ADU50641.1| inner-membrane translocator [Thermaerobacter marianensis DSM 12885]
          Length = 297

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 89/281 (31%), Gaps = 11/281 (3%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            IY   ++G++++ G + +++L       +GAY    L +R G+   L   ++  +    
Sbjct: 18  GIYTTMSFGMTVIYGVMKIINLAHAGFMMLGAYFVFELFNRLGVHPILGALLAFPVFFLV 77

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           GM +           L +  L +S+      +                       ++ + 
Sbjct: 78  GMAVHW---------LLVRWLPVSDQPTLPSLLLLFGLWLVLQNVGYAVWGNHDRSIYTA 128

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
           +         +   +    V          + L L RT    A R +  N  A   +   
Sbjct: 129 MTLATVRVGPLTLSVVQLVVFAVAVVSLVLLQLMLTRTWFGRAVRALTQNPFAGRLVGID 188

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
                  +F +  AF G+AGA  A+         F     +    I++LGG+ S + +A 
Sbjct: 189 TARTARLSFGLGIAFAGLAGALLASLYSF--DPDFGRPFLLRSFVIIVLGGLESFAGVAL 246

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              IL  V           +   + F             +A
Sbjct: 247 GALILALVETFSVQFVPAGYQMAISFSLLVVALLVLPGGVA 287


>gi|126731555|ref|ZP_01747361.1| inner-membrane translocator [Sagittula stellata E-37]
 gi|126708091|gb|EBA07151.1| inner-membrane translocator [Sagittula stellata E-37]
          Length = 306

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 111/318 (34%), Gaps = 15/318 (4%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +  T   + + +     ++  + A GL+++ G +GL++L     Y +GA+      +  G
Sbjct: 1   MSPTLIAEQVLNGLQSGIMLFLMAAGLTLIFGVMGLINLAHGSLYMVGAFCAAATAAATG 60

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
                L+   A  + A  +I      +  G           +    +L  +  I     G
Sbjct: 61  SYALGLVGALAGAAAAGALIELAVIRRLYGR----------DHLDQVLATFALILIFSEG 110

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                  + L   V   +         + Y ++   ++     L+A++   + RT +   
Sbjct: 111 TRWLFGSFPLYLDVPPALSGPVTLPFGIQYPLYRLTLIGAGLALAAALFWLIGRTRLGIR 170

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R   ++++   +L   I       FA+ +A  G+AGA     +             I+ 
Sbjct: 171 IRAGENDREMIAALGVNIDALYTLVFALGAALAGLAGALVGTLQSV--QVGMGEPVLILA 228

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVI 326
              +++GG+ S+        ++     L       +F   +    +    +   +  + I
Sbjct: 229 FVTIVIGGIGSIRGALVGALLVGLTGTLGSVFLPEFFKLFMPPSEATQTGSALASMAIYI 288

Query: 327 ALFLVILMRSHSLLRLRT 344
            +  V++ +   L  +RT
Sbjct: 289 LMAAVLVWKPTGLYGVRT 306


>gi|317154545|ref|YP_004122593.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2]
 gi|316944796|gb|ADU63847.1| inner-membrane translocator [Desulfovibrio aespoeensis Aspo-2]
          Length = 295

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 94/306 (30%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +  +   IY + A G  ++  +  +++         GAY    L  ++ +       +
Sbjct: 8   FINGLVVGGIYSLVALGFVVIYKATKVVNFAQGELVMAGAYICFALTVQFNIPFLWAFLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + S   G+++    L+       I+ ++++    ++L     +  G         L  
Sbjct: 68  TLVFSVLLGLVIERVVLRPLIGEAHISVIMVTVGMSSVLKSLVQLFWGTQIRVYPQVLP- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                           + +               L A   ++ + +    A R    +Q+
Sbjct: 127 ----------AEPVVIAGLPVAPVYLAAFALSAVLFAIFSVFFKYSRTGVAMRATAFDQQ 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   I      ++ ++     + G          S         + V   VILGG+
Sbjct: 177 AAQSMGIGIKNIFAMSWCIACVVSAVGGVILGNINGINSHLGH---LGLKVFPAVILGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL   A    I+  +  +C G                         I L ++++++ + 
Sbjct: 234 DSLLGAALGGLIIGVLENVCDGAARQLLG--------LGGFREVAAFIILVVILMIKPYG 285

Query: 339 LLRLRT 344
           L   + 
Sbjct: 286 LFGTKE 291


>gi|226314579|ref|YP_002774475.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599]
 gi|226097529|dbj|BAH45971.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599]
          Length = 292

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 88/307 (28%), Gaps = 27/307 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ +  +   IY + A G   +     +++L       +G    V L           +
Sbjct: 6   QYVANGLVSGGIYAIVAVGFITIYSVSKVINLAQGEFLMLGGMVTVALIGMNLPYGLAAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +++    ++        +        ++   I   I      I             
Sbjct: 66  LAILLVTLIGVLMQKYVIAYVKKANPISLIILTIGISTLIRGIASFIWG----------- 114

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +  +          V+      ++L  +  +   +   + +T +         N
Sbjct: 115 -KDAFALEPITSNEPISLGGVMIAQQSIWILAAVLIILLLLWYLMDKTILGKKINACSVN 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             A   +  +     + AFA+S A   +AG   A     ++         I   S  ILG
Sbjct: 174 PMAARLMGISPTKMSMLAFAISGATGAIAGIVIAPL--SVTSYDIGVLLGIKGFSAAILG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +    A A  +L  V  L  G         + F             + L  ++L++ 
Sbjct: 232 GLGNPLGAAVAAFLLGIVESLGAGYISSGMKDAIAF-------------LVLIGMLLIKP 278

Query: 337 HSLLRLR 343
             +   R
Sbjct: 279 SGIFGER 285


>gi|114768853|ref|ZP_01446479.1| branched-chain amino acid ABC transporter, permease protein [alpha
           proteobacterium HTCC2255]
 gi|114549770|gb|EAU52651.1| branched-chain amino acid ABC transporter, permease protein [alpha
           proteobacterium HTCC2255]
          Length = 337

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/336 (10%), Positives = 83/336 (24%), Gaps = 23/336 (6%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L      S               + A G+++V G L   +       A G    ++   
Sbjct: 4   LLNAFFLMSNFVFVPAIAYGSQLALGAVGVTLVYGILRFSNFAHGDIMAFGTMVVILFTW 63

Query: 87  RYGLSI---------WLLIPVSAMISGACGMIMGLPSL--KFRGDYLAIATLIMSEIFQN 135
            +              L +P   + +    +               + +  LI S     
Sbjct: 64  LFQSYGINLGPLPTAILALPFGIIATAIFLLGSDKFVYKFYREKKAIPVTYLIASVGIMF 123

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L        G      AD   F+                 +     +  +   +  ++ 
Sbjct: 124 VLNGIVRFIIGPNDQRFADGERFIIKAKAMKQYLGTAEGVSIKVSQGLTVITAVIVVMAL 183

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              L   RT    + R   DN+        +        + + +    +AG  +   +  
Sbjct: 184 FWFLNKTRT--GKSMRAFSDNEDLALLSGISPDKVVSVTWILVAILATIAGTLYGLDKSF 241

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV--------ELCCGMNFYYFN 307
                  F   + + +  I+GG+ +         ++            +    +    + 
Sbjct: 242 --KPFTYFMLLLPIFASAIVGGLGNPLGAIAGGFVIAFSEIMITYPYKKFVAYIVPGDWK 299

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                          +  I L LV+L +   +   +
Sbjct: 300 PDGLVQLLATDYKFAVSFIILVLVLLFKPTGIFAGK 335


>gi|91788846|ref|YP_549798.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91698071|gb|ABE44900.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas sp. JS666]
          Length = 287

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 97/302 (32%), Gaps = 26/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M A GL+++ G +G+++L     Y +GAY              L   +
Sbjct: 10  LLNSVQYGLLLFMLAAGLTLIFGIMGVVNLAHGSFYMLGAYLA----------WSLSAQL 59

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            ++        +         ++L        +    +L+ +  I   +    +      
Sbjct: 60  GSLTLAIVVGAVLSVVFGLALEWLLFRHFYKRDHLDQVLLTFGLIYIFEELRSILWGDDV 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G T+  L+      +  + Y ++  ++      L+  +   + RT +    R    N++
Sbjct: 120 HGVTIPDLLGASIPLTENLSYPVYRLFMSGVCIALALGLYGLISRTRLGMKIRAGAFNRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL   I       FA+      +AG   A                I+   +V++GG+
Sbjct: 180 MAESLGINIKRIHAVVFALGVGLAAVAGMIAAPIASV--YPNMGSQVLIMCFVVVVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++  V      +                     L+ + +  V+L +   
Sbjct: 238 GSVRGALIAALLVGLVDTFGKVLLPSVAG--------------MLVYMLMAGVLLWKPEG 283

Query: 339 LL 340
           L 
Sbjct: 284 LF 285


>gi|269794379|ref|YP_003313834.1| monosaccharide ABC transporter membrane protein [Sanguibacter
           keddieii DSM 10542]
 gi|269096564|gb|ACZ21000.1| monosaccharide ABC transporter membrane protein [Sanguibacter
           keddieii DSM 10542]
          Length = 380

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 83/298 (27%), Gaps = 29/298 (9%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYG 89
             S     ++     +  +   G++ V+ + G + L+      +    A +         
Sbjct: 93  FASFDNALTILRLAAVLGVLCIGMTFVI-TGGGIDLSVGSVLGLATVWASTLATQTMARD 151

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
               +++ V+  +  ACG+I G+     +      ATL M    + +             
Sbjct: 152 THWLVMVGVALAVGVACGLINGILIAYGKIVGFM-ATLAMMVGARGLAEIIAN------- 203

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                        V        F +S +   + ++   L        +     RT     
Sbjct: 204 --------RKTQVVSVPEFLDVFRASVLGVPVLVWMFALVSVAGWVLL----NRTTFGRR 251

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              +  N +A       +    +  +A+S    G+AG    A     S    +  E   +
Sbjct: 252 TVAVGGNPEAARLAGIKVKRHTMYLYALSGLTAGIAGVMMLARTTAGSSTNGQMYELDAI 311

Query: 270 ISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            ++V+      GG  ++        I   +  +    N       +       +    
Sbjct: 312 AAVVVGGTLLAGGRGTIVGTVLGVLIFTTLTNVFTQNNMSTSAQAVVKGVIIVVAVLV 369


>gi|124268858|ref|YP_001022862.1| putative urea/short-chain amide transport system permease
           [Methylibium petroleiphilum PM1]
 gi|124261633|gb|ABM96627.1| putative urea/short-chain amide transport system permease protein
           [Methylibium petroleiphilum PM1]
          Length = 291

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 86/299 (28%), Gaps = 27/299 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +      +   GL+I++G+LGL++      +AIGAY+  +     G  +  ++  +A+ 
Sbjct: 15  LVLGGTLALVGCGLTIILGTLGLVNFAHGAFFAIGAYAGWLAFEWTGSYLAAVVIGAAVT 74

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                +I      +F         L+   +   I+   + I  G                
Sbjct: 75  CAFGFVIERGLISRFYQRPHEDQILLTFGLGIVIVEALRAIFGGV-----------GRAM 123

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                         VIY  +   V            L L  + +    R   ++      
Sbjct: 124 PSPDWAAGAVSIGPVIYPEYRLVVFGIAALSLLVFYLLLYHSRLGLIVRAAIEDTLMVRI 183

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L       K   FA+    +G+AG   A                +    +V++GG+ S  
Sbjct: 184 LGLRAAQIKAVVFAIGVLAVGLAGVVMAPIVSI--NPDVGARFMVQSFVVVVIGGLGSFP 241

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  I   +  L                          + + +  ++ +R   L+ 
Sbjct: 242 GAIIGGFIAGQIQTLTAIFE--------------AAYSDVALFLTMVAILAVRPRGLMG 286


>gi|186476364|ref|YP_001857834.1| inner-membrane translocator [Burkholderia phymatum STM815]
 gi|184192823|gb|ACC70788.1| inner-membrane translocator [Burkholderia phymatum STM815]
          Length = 419

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 54/326 (16%), Positives = 104/326 (31%), Gaps = 27/326 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L      +L +      +Q ++ +   Q    ++FA   ++++G  GLLS     +  
Sbjct: 22  AALPWAALGVLLVVPPCVSTQSWLVAWLAQTAAMIVFALSYNLLLGGAGLLSFGHAASSG 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGA     L +R+GL + LL  +  +     G + GL + +  G   A+ TL + E+   
Sbjct: 82  IGALIAAQLFNRFGLPLPLLPLLGGIGGALFGALYGLVATRRSGTAFAMITLGIGELVAA 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                     G+AG+ +                    P          Y ++   C L+ 
Sbjct: 142 AAWTLPDWFGGEAGVAI------------DRTAGIALPGFTFGPAREAYALIALWCALAV 189

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L RT        +RDN     ++       +      SS F G+AG     + + 
Sbjct: 190 IAMYALSRTPFMRLANAVRDNPVRAAAIGCYPRRVRYEVVVWSSFFAGIAGTLGLINVEL 249

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +S +      +  V+   ++GG  +                                  S
Sbjct: 250 VSTESVGMLRSGSVLVATVIGGSGAFFGPVAGA---------------VVLVFFSVVVAS 294

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                   + +    V++M    +  
Sbjct: 295 VTRAWLLYLGLFFMAVVMMSPDGIAG 320


>gi|330819232|ref|YP_004348094.1| inner-membrane translocator [Burkholderia gladioli BSR3]
 gi|327371227|gb|AEA62582.1| inner-membrane translocator [Burkholderia gladioli BSR3]
          Length = 345

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/326 (11%), Positives = 99/326 (30%), Gaps = 18/326 (5%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           + F     +   +     ++  +   +          + S+     +  + A   + V+ 
Sbjct: 25  ARFFNPAARQKLLAFASLLLLIVFFSIASSNFLEVDNLVSILQATAVNGVLAVACTYVII 84

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           + G + L+        A    ++ + +G+ + L I  + +     G + G    K +   
Sbjct: 85  TSG-IDLSVGTLMTFCAVMAGVVLTNWGMPLPLGILAALLFGALSGCVSGFVIAKMKVPP 143

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                           +    +  G + +    R  +   T              +I  +
Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFTAIAQDSLIGNLIPAL 191

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +   +L +  ++    + L +T        +  N++A       +   K++ +  S A 
Sbjct: 192 PIPNAVLILFLVAIGASIVLNKTLFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFSGAV 251

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+AG   A+  +   P + +  E   + ++VI      GG  S+        I+  +  
Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSILGTIIGAFIMSVLTN 311

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               M+       +       +    
Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYV 337


>gi|126665341|ref|ZP_01736323.1| inner-membrane translocator [Marinobacter sp. ELB17]
 gi|126629969|gb|EBA00585.1| inner-membrane translocator [Marinobacter sp. ELB17]
          Length = 287

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 102/304 (33%), Gaps = 28/304 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLSIWLLIP 97
           + +     L+  + A GL+++ G +G+L+L     Y +GAY  +         +    + 
Sbjct: 10  LVNGIQYGLLLFLIASGLTLIFGVMGILNLAHGSMYMVGAYLVWYFAAVTGSFTAAAALS 69

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
               +     +   L    +  ++L    L +  IF    ++     N   G+ V D L 
Sbjct: 70  AVIALGLGILIERLLIQRLYNRNHLDQVLLTIGMIFVFNALQSILWGNDPHGVSVPDALS 129

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                  +             Y I+  +  L    ++A++   + +T +    R    N+
Sbjct: 130 GSIPFTDN-----------SSYPIYRIFAALVCIGIAAALYFVVSKTRLGMLIRAGESNR 178

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +   +L   I       FA+      ++G   A  R  +          I    +V++GG
Sbjct: 179 EMVEALGVNIKNLYTIVFAIGVMLAAISGIIAAPIRSIVPGMGESVL--ITCFVVVVIGG 236

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           M S+        ++  +      +     N               ++ I + LV+L++  
Sbjct: 237 MGSIKGAFVGALLVGVISTFAAVLIPSMSN--------------MIIYIFMILVLLVKPQ 282

Query: 338 SLLR 341
            L  
Sbjct: 283 GLFS 286


>gi|33594443|ref|NP_882087.1| putative branched-chain amino acid transport permease [Bordetella
           pertussis Tohama I]
 gi|33564518|emb|CAE43833.1| putative branched-chain amino acid transport permease [Bordetella
           pertussis Tohama I]
 gi|332383854|gb|AEE68701.1| putative branched-chain amino acid transport permease [Bordetella
           pertussis CS]
          Length = 295

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 110/315 (34%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y M + GL+++ G L +++      Y +GA+   +  S
Sbjct: 4   LFGIPIQALLGQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMLGAFVAWMGLS 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL+ W+++ ++ ++ G  G+++    L+       +  L+++     ++        G
Sbjct: 64  YLGLNYWIMLILAPLVVGLFGILIEKLLLRHLYKLDHLYGLLLTFGLTLLIEGLFRSFYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F++   +  +V++    +  +    + RT +
Sbjct: 124 VSGQPYPTPEALRGAT----------NLGFMVLPNYRAWVVVASITVCLTTWFVIERTRL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N +   +    +       +    A  G AG   A         +   +  
Sbjct: 174 GALLRAGTENPRLVEAFGVNVPRMITLTYGFGVALAGFAGVLAAPVLQI--SPLMGSNLI 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+         L  +  L                  +     T++ I
Sbjct: 232 IVVFAVVVIGGMGSIMGAIVTGLGLGVIEGLTKVF--------------WPEASNTVVFI 277

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L+R   L  
Sbjct: 278 IMAIVLLLRPAGLFG 292


>gi|121606497|ref|YP_983826.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120595466|gb|ABM38905.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 309

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/310 (9%), Positives = 90/310 (29%), Gaps = 18/310 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS-----IW 93
           +    +  ++Y + A G  ++  + G+ +          A +                ++
Sbjct: 8   LIGGLMAGMLYSLVALGFVLIYKASGVFNFAQGAMVLFAALAMARFSEWIPKWTGIDNLF 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           +   ++  I+     ++     +    +L         +    +  +             
Sbjct: 68  IANLIAFAIAAVLMFVVAWLIERLVLRHLVNQEGATLLMATLGIAYFLEGLGQTLFGSDI 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            ++         +          ++              L   + ++ ++T    A R +
Sbjct: 128 YKIDIGMPK-DPIFMLDTVFPGGILVNKEDVIAAAIAASLVILLSIFFQKTTTGRALRAV 186

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            D+ +A  S+   +    +  + V+     ++G  + +            +  +  + +V
Sbjct: 187 ADDHQAAQSIGIPLNRIWVIVWCVAGVVALVSGMIWGSKLGV---QFSLTTIALRALPVV 243

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ILGG+TS+        I+    +L       Y    ++   +          +   + +L
Sbjct: 244 ILGGLTSVPGAILGGLIIGVGEKLSEVYLGPYVGGGIEIWFA---------YVLALVFLL 294

Query: 334 MRSHSLLRLR 343
            R   L   +
Sbjct: 295 FRPQGLFGEK 304


>gi|218529488|ref|YP_002420304.1| inner-membrane translocator [Methylobacterium chloromethanicum CM4]
 gi|254560410|ref|YP_003067505.1| ABC transporter membrane protein [Methylobacterium extorquens DM4]
 gi|218521791|gb|ACK82376.1| inner-membrane translocator [Methylobacterium chloromethanicum CM4]
 gi|254267688|emb|CAX23535.1| putative ABC transporter, membrane spanning protein
           [Methylobacterium extorquens DM4]
          Length = 294

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/298 (15%), Positives = 100/298 (33%), Gaps = 27/298 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                I+++ A GL+I+ G++G++++       +GAY+   L S +GL   L +P S ++
Sbjct: 17  LSIASIWLIAAIGLTIIYGTVGVINMAHGEFIMLGAYTSYALQSSFGLPFLLCLPASFVV 76

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G+I+    +++  +      L    +   ++   + I                   
Sbjct: 77  VALVGLIIERGLIRYLYNRPLDTLLATWGVSLVLMQGVRLIFG-----------SDPKYI 125

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               I        F    +F   VL     + A+      RT      R +  N++   S
Sbjct: 126 AVPEIFQSNVEVGFASLSVFRLVVLAITAIIVAATAWLFYRTRFGMQVRAVMQNKEMAAS 185

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                    ++ FA+ +   G+AG+ F      +      +     ++ +V   G  +L 
Sbjct: 186 FGINADRVYMTTFALGAGLAGIAGSLFGVLAIVLPTMGTAYVVQAFLVVVV---GGGTLM 242

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
               A  +   +  +   +    F                L+ + + + +  R   L 
Sbjct: 243 GSIAAAGLTGELQSVFAFVTNDTFAR-------------FLLYVLIVVFLRFRPRGLF 287


>gi|163855491|ref|YP_001629789.1| putative branched-chain amino acid transport permease [Bordetella
           petrii DSM 12804]
 gi|163259219|emb|CAP41519.1| putative branched-chain amino acid transport permease [Bordetella
           petrii]
          Length = 291

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 95/304 (31%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IYV+ A GLS++ G L +++      + +GAY+ V++          ++  
Sbjct: 10  LFTGLALGAIYVLLAVGLSLIFGMLTVVNFAHGAFFMLGAYAGVLVLDWTQNFWAAMLLA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++G   +          G  +    L+   +   ++   + +       + A     
Sbjct: 70  PIAVAGIGMICERWLIRPLYGRGIDYPLLLTFGLAYMLVEAVRMVFGRAGLPFDAPEALS 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T              F  +  +  +++     L  ++ L L +T+     R    +  
Sbjct: 130 GFT-----------NLGFFDFPTYRLFIIAVTAVLLLALWLLLEKTSFGLIVRAGARDPV 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +    L  F + +    +AG   A  +          S  I+   + ++GGM
Sbjct: 179 IVRVLGVDVSRVWLLVFGLGTGIAALAGVLAAPLQGV--SPEMGTSVLIVAFVVTVVGGM 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL     A  ++     +                  F       M + +  V+L R   
Sbjct: 237 GSLMGAVVAGLLVGVAESISVLF--------------FPEAAKVSMFVIMAAVLLWRPQG 282

Query: 339 LLRL 342
           L   
Sbjct: 283 LFGR 286


>gi|114767621|ref|ZP_01446342.1| ABC sugar transporter, inner membrane subunit [Pelagibaca
           bermudensis HTCC2601]
 gi|114540362|gb|EAU43452.1| ABC sugar transporter, inner membrane subunit [Roseovarius sp.
           HTCC2601]
          Length = 356

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/331 (14%), Positives = 100/331 (30%), Gaps = 22/331 (6%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGA--TKSQKYIDSMGIQILIYVMFAWGLSI 58
           M  F   L+    ++ L+ ++  L++F  +      S   +  +  Q+ I  + A   ++
Sbjct: 30  MGRFHDALHSTPALVPLIVLISALVVFGIVLGSKFFSPFALTLILQQVQIVGVLAAAQAL 89

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           ++ + G + L+      + +     +  RYG+   L IP+      A G + G    K +
Sbjct: 90  IILTAG-IDLSVGAVAVLCSVIMGQVTFRYGIPAPLAIPIGLACGTAIGAMNGWLVSKVK 148

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
                            + +    I      +Y  +                   + F I
Sbjct: 149 LPPFI------------VTLGMWQIVLAVNYLYSRNETLRSQEIEELAPALQFLGTKFTI 196

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
               +   ++ M      +   LR TA       + D+ +A            +S + + 
Sbjct: 197 GGAVITLGVVVMLGTVLILAYALRSTAWGRHVYAVGDDPEAAQLAGVDRHKTLMSVYMLV 256

Query: 239 SAFIGMAGAFFAASRDRISPD-MFKFSENIIVISIVILGGM------TSLSKIAKATAIL 291
               G+AG         +SP        NI  I+ V++GG+       S+        I+
Sbjct: 257 GFICGLAGWVMIGRFGSVSPSATTGVIGNIQAITAVVIGGISLFGGRGSILGAFFGALIV 316

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                           + L          T 
Sbjct: 317 GVFELGLRMAGADPQWTYLLIGVLIIAAVTV 347


>gi|121594052|ref|YP_985948.1| inner-membrane translocator [Acidovorax sp. JS42]
 gi|120606132|gb|ABM41872.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Acidovorax sp. JS42]
          Length = 445

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/332 (13%), Positives = 105/332 (31%), Gaps = 33/332 (9%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++      L  +      +     +M  QI   ++     +I++G  G+LS    +   +
Sbjct: 30  IVIWSLFALALVVAPQLFTSSLALTMLSQIGYAIIICLSYNILLGQGGMLSFGHAVYTGL 89

Query: 77  GAYSYVILGSR-----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           G++  V   +        + + L+  V  +      +++G  + K  G   A+ TL + E
Sbjct: 90  GSFLAVHAINMASDGRLPIPLVLMPLVGGLAGMFFAVLLGYVTTKKSGTTFAMITLGIGE 149

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +  ++ + +     G+ GI                +             I +YY++   C
Sbjct: 150 LVASMALMFPEFFGGEGGIT------------TDRVYGRPVLGITFGPAIQVYYLIAAYC 197

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           F+  + +     T +      +RDN +    +       +  AF ++  F G+ GA  A 
Sbjct: 198 FVCTAAMFAFTGTPLGRILNAVRDNPERVEFIGYNTQRVRYFAFIIAGFFAGIGGALAAI 257

Query: 252 SRDRIS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           + + ++  D      +   +    LGG T                               
Sbjct: 258 NFEIVTAADSVSVVRSGSYLLFTFLGGATFFFGPIIG---------------AVLLVLAS 302

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 +      + +    +++     +  L
Sbjct: 303 VLLSELSKAWLLYLGLVFLFMVMYAPGGIASL 334


>gi|85705939|ref|ZP_01037035.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. 217]
 gi|85669527|gb|EAQ24392.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. 217]
          Length = 310

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 51/313 (16%), Positives = 105/313 (33%), Gaps = 28/313 (8%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
                Y      ++++   +A G +++ G  GLLSL   + +A G Y   +     GL+ 
Sbjct: 19  FVLPAYHHGNLARVMVLASYAMGYNLMFGYTGLLSLGHALFFAAGMYGMGLGVQYLGLTA 78

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
              + +          ++   +L+  G    I TL+ ++     ++ +  +T G  G  +
Sbjct: 79  VPALILGLAAGAVVSGVLAALALRTAGVAFMIVTLMFAQAGYLTVLYFGALTRGDEGFVI 138

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                 L                 +  E   Y   L +  +   + LWL R+        
Sbjct: 139 QQADRMLW-------------GIDLSLEGNRYLAALILFGVCLMLCLWLVRSPFGRVLVA 185

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           IR+N++    L   +   K +   +S      AGA +      +         +I  +  
Sbjct: 186 IRENEERVRMLGYDVFAHKFAVMVISGTMAAAAGAAYGLLFGYVGATFASVQYSIFPLLW 245

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           V+LGG  ++      T  +  +++L  G+                  +  +  +AL  + 
Sbjct: 246 VLLGGAGTVLGPFIGTLFMFYLIDLSSGV---------------TTAYMLIAGVALVALT 290

Query: 333 LMRSHSLLRLRTP 345
           L     L+     
Sbjct: 291 LFAPQGLMGELRR 303


>gi|168183127|ref|ZP_02617791.1| ribose transport system permease protein RbsC [Clostridium
           botulinum Bf]
 gi|182673877|gb|EDT85838.1| ribose transport system permease protein RbsC [Clostridium
           botulinum Bf]
          Length = 331

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 93/314 (29%), Gaps = 16/314 (5%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++ L  V+  +++        +     ++ +Q  I  + A G++ V+   G + L+    
Sbjct: 22  MILLGFVILCVVIGSLSSNFFTVTNWLNILVQCSIVGIIAVGMTFVI-ITGGIDLSVGSM 80

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            A  A    ++         +++    + +          +         I TL    IF
Sbjct: 81  LAFSAIVSGMMLKNGASIPVVILVALIIGTAIGFANGFFITKF--NVPAFIVTLATMSIF 138

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           + + +      N    I  +                 +     +   I +   L+G    
Sbjct: 139 RGLTLVVSDGKNQALSISKSASPDLFSKLTAFSKIGDKLGPVPIPIIIMIIIFLIG---- 194

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
                  L+ T        I  N++A       I   +L A+ ++     ++G    A  
Sbjct: 195 ----YYVLQYTTFGRNLYAIGGNREATRFSGINIGKIELLAYTITGLLCALSGVVLNARL 250

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
               P+     E   + ++VI      GG  ++S       I+  +      MN   F  
Sbjct: 251 GAALPNAGVGYEMDAIGAVVIGGASLAGGEGTISGTILGVLIIGVLNNGLNLMNVNPFYQ 310

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 311 QVVKGAVILVAVLV 324


>gi|241766834|ref|ZP_04764653.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
 gi|241362756|gb|EER58543.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
          Length = 327

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 100/298 (33%), Gaps = 18/298 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               +I  + A GL++V G + +L+    +  A+GA+    +    G           M+
Sbjct: 39  LAMGMIIFIIASGLTLVFGLMDVLNFGHGVFIALGAFVATSVLGAMGDWTGSAELWRNMV 98

Query: 103 SGACGMIMGLPSLKFRGDYL--AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +    M++ +      G      I   +  +  + ILI    +  G+  I V      + 
Sbjct: 99  AVLPAMLVAMAVAGAVGLAFERFIVRPVYGQHLKQILITMGGMIIGEEFIKVIWGPAQIP 158

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             +   +R   +       E +    +L    + A +   L RT +    R    +++  
Sbjct: 159 LPLPEGMRG-SWLLGDAAVEKYRVVAVLVGLAVFALLAWTLSRTKVGLLIRAGVQDREMV 217

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            SL   I    +  F V SA  G+ G  +   +  + P M     N+++  ++I+GG+ S
Sbjct: 218 ESLGYRIRRLFVGVFVVGSALAGLGGVMWGMYQQSVVPQM-GAQVNVLIFIVIIIGGLGS 276

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                    ++  +      +                       +  +  ++L R   
Sbjct: 277 TGGALIGALLVGLMANYTGFLAPKVALFSN--------------IALMVAILLWRPQG 320


>gi|221640480|ref|YP_002526742.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131]
 gi|221161261|gb|ACM02241.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131]
          Length = 363

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/313 (13%), Positives = 86/313 (27%), Gaps = 11/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L V   +   L      S   +  +  Q+ I  +     ++VV + G + L+     
Sbjct: 48  LIVLVVSISIFGALLGQKFFSAFTLTLILQQVAIVGIVGAAQTLVVLTAG-IDLSVGAIM 106

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +        RYG+   L +          G + G    + +     +   +   +  
Sbjct: 107 VLSSVIMGQFTFRYGIPAPLSVLCGLAAGAGIGFVNGTLVARMKLPPFIVTLGMWQIVLA 166

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +     T     I     +            F               Y  + +  L 
Sbjct: 167 ANFLYSANETIRSQDISAQAPILQFFGN-----TFRLGADEAGRGGAVFTYGAVLLILLV 221

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I   LR+TA       + D+  A            ++ + +S     +AG        
Sbjct: 222 LVIAYVLRQTAWGRHVYAVGDDPDAAELAGVQTRNVLVTVYTLSGLICALAGWVMIGRLG 281

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   +F+    + ++VI      GG  S+  +     I+         M      + 
Sbjct: 282 SVSPTAGQFANIESITAVVIGGISLFGGRGSVLGMLFGALIVGVFSLGLKLMGTDPQWTY 341

Query: 310 LKFDCSFNMRHTT 322
           L            
Sbjct: 342 LLIGILIIAAVAV 354


>gi|315182471|gb|ADT89384.1| ribose ABC transporter, permease protein [Vibrio furnissii NCTC
           11218]
          Length = 327

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 96/312 (30%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALLFLIVVVSFLNPNFFTFDNLMNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   ++        + + + +P + +     G I G+   K +        + M+     
Sbjct: 88  LCG-AFAASLIAMEVPVLVAVPTALLAGAVLGGISGIIIAKGKVQAFIATLVTMT----- 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G   +Y   R    G T  +    +      +   + ++ +++       
Sbjct: 142 -------LLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWIMVVVFAAAWY 194

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +      T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 195 LL----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGLLSALAGIIVTSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAVVILLAVLV 322


>gi|163731876|ref|ZP_02139323.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
 gi|161395330|gb|EDQ19652.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
          Length = 318

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/284 (10%), Positives = 73/284 (25%), Gaps = 11/284 (3%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW---------LLIPVS 99
             + A G++++ G L   +       A GA   V+    +    +         L +P  
Sbjct: 7   LALGALGVTLIYGILRFSNFAHGDTMAFGAMVTVLFTWLFQSWGFSLGPLPTALLALPFG 66

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +      ++      +F  +  A   +++        I    +                
Sbjct: 67  ILACMGLLLVTDRMVYRFYREQKAKPVILVIVSLGVTFILNGIVRFIIGPDDQRFTDGER 126

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                   R        +  +      +L        +  +L RT    + R   DN+  
Sbjct: 127 FIISARTFREMTGLREGLAIKTTQGITVLVAVICVILLFWFLNRTRTGKSMRAYSDNEDL 186

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                       +  + + +    +AG  +   +         F   + + +  I+GG+ 
Sbjct: 187 ALLSGINPERVVMITWLIVAGLATIAGVLYGLDKSF--KPFTYFQLLLPIFASAIVGGLG 244

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +         ++                 L+  +   +     L
Sbjct: 245 NPLGAIAGGFVIAFSEVTVTYAWKKVLTYLMPENLEPSGLVQLL 288


>gi|91789238|ref|YP_550190.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91698463|gb|ABE45292.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas sp. JS666]
          Length = 326

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 103/289 (35%), Gaps = 12/289 (4%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
           P+L  L   +         +  +I I  +FA  L +++G  G++SL     + +GAY+  
Sbjct: 24  PVLWLLAFASPLLLSSHALIINEIAIVALFAISLDLILGFTGIVSLGHAAFFGLGAYAAA 83

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +          + + V+  +S   G    L  ++       + TL M  I   +  K   
Sbjct: 84  LFAKLVMPDPLVGLAVAIAVSTLMGAACSLTIMRGSDLTRLMVTLGMGLILLELANKLDW 143

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+        LG               F +      Y  L +  +   +   L 
Sbjct: 144 LTGGADGLQGVLMGPLLGR------------FEFDLSGRTAAYYSLCVGLILFLLARRLV 191

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            +        IRDN+    ++   +       + VS+   G AG   A +    S D+F 
Sbjct: 192 HSPFGATLMAIRDNRLRAMAIGIPVHARLAVIYTVSAGVAGAAGGLLAQTTGFASLDVFD 251

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           F  +  V+ ++++GG+  L        +   + ++   +   Y+   + 
Sbjct: 252 FHRSADVMLVLVVGGVGWLYGGIAGAVVFKLMQDILSAITPQYWTFWIG 300


>gi|91785753|ref|YP_560959.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91689707|gb|ABE32907.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 294

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 106/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGVPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +GL  W+++ ++ +I G  GM +    L++      +  L+++     ++        G
Sbjct: 63  YFGLPYWVMLVLAPLIVGLFGMAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 123 SSGQPYDVPSALSGAT----------NLGFMFLPNYRAWVVVASLVVCFATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGINVPLMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +  L                  +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSIMGSILTGLMLGVIEGLTRVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + LV+L+R   L  
Sbjct: 277 IMALVLLVRPAGLFG 291


>gi|148253468|ref|YP_001238053.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. BTAi1]
 gi|146405641|gb|ABQ34147.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 297

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 100/295 (33%), Gaps = 16/295 (5%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G++G++++       +GAY  V+ G  +G  I++ IP++ +++   G+++ 
Sbjct: 18  VALGLAITYGAMGVINMAHGEMVMVGAYVTVLSGLWFGTDIFIAIPLAFIVTALLGLLIE 77

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
              ++     L    L    I   I    +              L      V        
Sbjct: 78  RVVVRKLYGRLLDTLLATWGIAILIQQAVRLEFGLSFLGIHIQGLGPGLQNVSVPDILQG 137

Query: 172 -FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
            F  +      +  +++L    L+ +    + RT      R I  N K   +    +   
Sbjct: 138 TFRFAGADINRYRAFIILVTAMLAIATWFVIYRTVAGTQVRAIIRNPKMAAACGIDVTRV 197

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
               FA  S   G+AG   +  +          S  +    +V++GG+ SL     +  I
Sbjct: 198 NALTFAFGSGLAGVAGVMMSGFKTV--FPDMGTSMVVDGFLVVVMGGVGSLLGSVLSAGI 255

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           L  +  L            + F               +  +I+++   L  L+  
Sbjct: 256 LGEINGLVAAATNDILARAVVFG-------------VVIAIIVLKPKGLFALKGR 297


>gi|311693990|gb|ADP96863.1| inner-membrane translocator [marine bacterium HP15]
          Length = 287

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 106/303 (34%), Gaps = 28/303 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL++V+G +G+L+L     Y +GAY         G      I  
Sbjct: 10  LINGLQYGLLLFLIASGLTLVLGVMGILNLAHGSLYMVGAYLMWYFVGVTGSFTVSAILS 69

Query: 99  SAMISGACGMIMGLPSLKF-RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           + +      +I  L   +  + ++L    L +  IF    ++     N   G+ V + L 
Sbjct: 70  AVIALALGILIERLLIQRLYKRNHLDQVLLTIGMIFVFNSVQSILWGNDPYGVSVPEALS 129

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                  +             Y ++  +  L    ++A++ L + +T +    R    N+
Sbjct: 130 GSVPFTDN-----------SSYPVYRIFAALICIAIAAALYLVVSKTRLGMLIRAGESNR 178

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +   +L   I       FA+      ++G   A  R  +          I    +V++GG
Sbjct: 179 EMVEALGVNIKSLYTIVFAIGVMLAAISGIIAAPMRSIVPGMGESVL--ITCFVVVVIGG 236

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           M S+     +   +  +      +     N               ++ + + LV+L++  
Sbjct: 237 MGSIKGAFVSALWVGVITTFAAVLTPTMSN--------------MVIYLFMILVLLVKPQ 282

Query: 338 SLL 340
            L 
Sbjct: 283 GLF 285


>gi|295696245|ref|YP_003589483.1| inner-membrane translocator [Bacillus tusciae DSM 2912]
 gi|295411847|gb|ADG06339.1| inner-membrane translocator [Bacillus tusciae DSM 2912]
          Length = 289

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 96/303 (31%), Gaps = 27/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      IY + A G   V    GL++        +GA S V+  +    + W+ +  
Sbjct: 8   VLSGLALGGIYALIAVGFVTVFKVCGLINFAQGDFATVGALSLVMFFASGLPT-WMALFG 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++   G ++    L    D      +I +     +L     +  G     V+  L  
Sbjct: 67  AIVVAAIVGGVLHRVFLDKLRDQAETVQIIATIGLSIVLQSVGQLLMGSQPRAVSPFLPG 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                      +L+ +  L   +  +  ++    A R +  N+ 
Sbjct: 127 QPYHFMG-----------GAVPRQDVVILVTVAILFVLLFFFFEKSYAGAALRAVMLNRD 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           +   L  +       +F + +A  G+ GA  A     +       +  +      ++GG+
Sbjct: 176 SARLLGISARSMATFSFVIGAAVAGLGGAVIAPV--TLVSYDMGLTLGLKGFVAAVVGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           + +        IL  +  +  G     +   + F             + L +++L R + 
Sbjct: 234 SDVPGAVAGAFILGMLESVGAGFVSSAYKEAIAF-------------VVLIVILLWRPNG 280

Query: 339 LLR 341
           L  
Sbjct: 281 LFG 283


>gi|256830053|ref|YP_003158781.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
 gi|256579229|gb|ACU90365.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
          Length = 295

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 106/306 (34%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   IY + A G  I+  +  +++        +GAY    L  +Y L   +   +
Sbjct: 8   IINGLVVGSIYSLVALGFVIIFKATKVVNFAQGELVMVGAYVCFSLTVQYQLPFLVSFLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + S A  +++    L+       I+ ++++    ++L  +  +T G         L  
Sbjct: 68  TLVFSIALAILVERLILRPLIGEPIISVIMVTIGLSSMLKSFVQMTWGTQIQVFPPILPQ 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +  L     + ++F +  +                 L+ + +++  A R    +Q+
Sbjct: 128 EPYMLLGLPIAPVYVAAFGLSILLF-----------GVFTLFFKYSSLGIAMRATAFDQQ 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   I      ++ +++    + G            +       + V   VILGG+
Sbjct: 177 AAQSMGIGIKSIFALSWCIAAVVSSIGGIILGNIN---GINAQLGHLGLKVFPAVILGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL   A    I+  +  +C G     F                     L ++++++ + 
Sbjct: 234 DSLLGAALGGLIIGVLENICEGAAKDLFG--------LGGFKEVASFAILVIILMIKPYG 285

Query: 339 LLRLRT 344
           L   + 
Sbjct: 286 LFGTKE 291


>gi|254512091|ref|ZP_05124158.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacteraceae bacterium KLH11]
 gi|221535802|gb|EEE38790.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacteraceae bacterium KLH11]
          Length = 291

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 102/305 (33%), Gaps = 29/305 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96
           + S      +Y + A G  ++  +   ++        +GA+  +        GL   L +
Sbjct: 7   LISGLANGCVYGLIALGFVLIYKATEAVNFAQGDFMMLGAFVTIGLTNTEYIGLPFLLAL 66

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P+S  I  A G ++    ++        A +I++     ++     +  G          
Sbjct: 67  PLSLGIMAALGYLVDRLIIRRLFGESQTAVVILTIALGFVIRFVAGLIWG---------- 116

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                T+++ +         ++  +    V++    L+  + ++  +T +  A +    N
Sbjct: 117 -HEPQTLQNPLAGKEVRFGGLVLGMEDVAVIVVTVLLTWGLYVFFSKTRLGLAMQGASQN 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           Q A + +   +   +   +A++    G+AG  FAA     S D       I   +  ++G
Sbjct: 176 QLAAYYMGIPVKRVQGLIWALAGIVAGIAGILFAAK---GSVDPTTGLLGIKAFAAAVIG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  SL        I+  +           ++ +                  L  V++ R 
Sbjct: 233 GFGSLPGALAGGLIVGVIEPFASRYIAAGYSQIAP-------------YALLLAVLIFRP 279

Query: 337 HSLLR 341
           H L  
Sbjct: 280 HGLFS 284


>gi|222111215|ref|YP_002553479.1| inner-membrane translocator [Acidovorax ebreus TPSY]
 gi|221730659|gb|ACM33479.1| inner-membrane translocator [Acidovorax ebreus TPSY]
          Length = 445

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/332 (13%), Positives = 105/332 (31%), Gaps = 33/332 (9%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++      L  +      +     +M  QI   ++     +I++G  G+LS    +   +
Sbjct: 30  IVIWSLFALALVVAPQLFTSSLALTMLSQIGYAIIICLSYNILLGQGGMLSFGHAVYTGL 89

Query: 77  GAYSYVILGSR-----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           G++  V   +        + + L+  V  +      +++G  + K  G   A+ TL + E
Sbjct: 90  GSFLAVHAINMASEGRLPIPLVLMPLVGGLAGMFFAVLLGYVTTKKSGTTFAMITLGIGE 149

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +  ++ + +     G+ GI                +             I +YY++   C
Sbjct: 150 LVASMALMFPEFFGGEGGIT------------TDRVYGQPVLGITFGPAIQVYYLISAYC 197

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           F+  + +     T +      +RDN +    +       +  AF ++  F G+ GA  A 
Sbjct: 198 FVCTAAMFAFTGTPLGRILNAVRDNPERVEFIGYNTQRVRYFAFIIAGFFAGIGGALAAI 257

Query: 252 SRDRIS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           + + ++  D      +   +    LGG T                               
Sbjct: 258 NFEIVTAADSVSVVRSGSYLLFTFLGGATFFFGPIIG---------------AVLLVLAS 302

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 +      + +    +++     +  L
Sbjct: 303 VLLSELSKAWLLYLGLVFLFMVMYAPGGIASL 334


>gi|188580549|ref|YP_001923994.1| inner-membrane translocator [Methylobacterium populi BJ001]
 gi|179344047|gb|ACB79459.1| inner-membrane translocator [Methylobacterium populi BJ001]
          Length = 294

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 99/298 (33%), Gaps = 27/298 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                I+++ A GL+I+ G++G++++       +GAY+   L S  GL   L +P S ++
Sbjct: 17  LSIASIWLIAAIGLTIIYGTVGVINMAHGEFIMLGAYTSYALQSSLGLPFLLCLPASFVV 76

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G+++    +++  +      L    +   ++   + I                   
Sbjct: 77  VALVGLVIERGLIRYLYNRPLDTLLATWGVSLVLMQGVRLIFG-----------SDPKYI 125

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               I        F    +F   VL     + A+      RT      R +  N++   S
Sbjct: 126 AVPEIFQSNVEVGFASLSVFRLVVLGITALIVAATAWLFYRTRFGMQVRAVMQNKEMAAS 185

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                    ++ FA+ +   G+AG+ F      +      +     ++ +V   G  +L 
Sbjct: 186 FGINADRVYMTTFALGAGLAGVAGSLFGVLAIVLPTMGTAYVVQAFLVVVV---GGGTLM 242

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
               A  +   +  +   +    F                L+ + + + +  R   L 
Sbjct: 243 GSVAAAGLTGELQSVFAFVTNDTFAR-------------FLLYVLIVVFLRFRPRGLF 287


>gi|170694302|ref|ZP_02885456.1| inner-membrane translocator [Burkholderia graminis C4D1M]
 gi|307731477|ref|YP_003908701.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|170140725|gb|EDT08899.1| inner-membrane translocator [Burkholderia graminis C4D1M]
 gi|307586012|gb|ADN59410.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
          Length = 294

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 106/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGFS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +G+  W ++ ++ ++ G  G+++    L++      +  L+++     ++        G
Sbjct: 63  YFGVPYWPMLIIAPLLVGLFGVLIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 123 SSGQPYDVPSALSGAT----------NLGFMFLPNYRAWVVVASLIVCFATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGINVPLMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +  L                  +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSIMGSILTGLMLGVIEGLTRVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + LV+L+R   L  
Sbjct: 277 IMALVLLVRPAGLFG 291


>gi|167470525|ref|ZP_02335229.1| leucine/isoleucine/valine transporter permease subunit [Yersinia
           pestis FV-1]
          Length = 282

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 58/189 (30%), Positives = 85/189 (44%), Gaps = 9/189 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   +++          +    +    LIYVM   GL++VVG  GLL L     YAIGA
Sbjct: 91  LLAAVVIIAAVAWPFLVSRGSVDIATLTLIYVMLGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+Y +L   YGL  W  +P++ + +   G ++G P L+ RGDYLAI TL   EI + +L+
Sbjct: 151 YTYALLNHYYGLGFWESLPLAGITAALSGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLL 210

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV---------RSLIRFFRFPSSFVIYEIFMYYVLLG 189
               IT G  GI    +    G             +   FF          IF+Y V L 
Sbjct: 211 NNTEITGGPNGISQIPKPTLFGLEFSRTAKDGGWDTFHNFFGLTYDPSHRIIFLYLVALL 270

Query: 190 MCFLSASII 198
           +  L+  +I
Sbjct: 271 LVILTLFVI 279


>gi|291297058|ref|YP_003508456.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
 gi|290472017|gb|ADD29436.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
          Length = 318

 Score = 67.6 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 54/287 (18%), Positives = 104/287 (36%), Gaps = 37/287 (12%)

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G+ SL       +GAY+  +   + GL + L + ++ + +    ++ GL   +  G 
Sbjct: 60  GHGGVPSLGQAAFLGLGAYTVGL-ALKAGLPLGLALLLAPLAAALLALLTGLLVFRTHGI 118

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           ++ + TL   ++  +   KW  +T G  G+                       S   I+ 
Sbjct: 119 FILMLTLAFGQMVYSAAHKWTGLTGGDDGLS---------------------LSGLSIHP 157

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           + ++ V +G+   +   +  L +T        IR N++   SL     + KLS + +++A
Sbjct: 158 VLLHLVAVGVLLAAVGGLRALLQTPYGKTLEAIRQNEEKIRSLGVPTFYYKLSLYLLTAA 217

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             G+AG+  A  R  ISP    +  +  ++ +V+LGG   L        +   V      
Sbjct: 218 LTGLAGSGLALHRSFISPHDLFWLTSATLMVMVLLGGSRGLWGAVFGALLYTFVQAWVSS 277

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
               +                  +   L L +L     L  L     
Sbjct: 278 FTDLWG---------------LFVGSLLVLTVLFAREGLWPLLERRL 309


>gi|13488197|ref|NP_085620.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14027869|dbj|BAB54461.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 311

 Score = 67.6 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 51/309 (16%), Positives = 100/309 (32%), Gaps = 17/309 (5%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A +  + L L +G      YI ++ +   +  +       +  ++G  S   V    IG
Sbjct: 9   IATIIVVGLALVVGGLVGTPYILAVLVIFGMVSILVLSYRTIT-TMGGWSFAHVALMGIG 67

Query: 78  AYSYVILGSRYGLSIWLL-IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
            YS  I          L  + +  + +     I+  P L+ R  Y  ++T    E  +  
Sbjct: 68  GYSVAIFSKAPFEIPVLAAVALGGVFAAFFAAILSWPVLRTRQYYFFLSTFAAGEALRQC 127

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            I+ K +T G AGI    R   L     +           V+  +F   +          
Sbjct: 128 YIQIKEVTGGTAGIAFIARPGVLPDPSSAFQFLCLVAVILVLLGLFYAALDA-------- 179

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
                  +      + + +++    SL       +  AF + S   G+AG  FA+    +
Sbjct: 180 -------SDTGKKIKAVGEDEALSSSLGIDAWALRALAFILGSFGAGIAGGLFASYNGIM 232

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           SP          +++  ++GG T  S        L  + E+   +  +          + 
Sbjct: 233 SPSDINAMLMFKIVAACVIGGTTRFSGPLLGLLFLTLIEEIFRFVPEFVPMIWGMLVIAA 292

Query: 317 NMRHTTLMV 325
            +       
Sbjct: 293 VIFSQRTGG 301


>gi|220914904|ref|YP_002490212.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|220924323|ref|YP_002499625.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219948930|gb|ACL59322.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219952655|gb|ACL63045.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 331

 Score = 67.6 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 55/321 (17%), Positives = 121/321 (37%), Gaps = 29/321 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
              +      A           +++L + +FA   ++++G  GLLS      + + +Y  
Sbjct: 31  LVFIGIAVALAVLPLILYPVFLMKVLCFALFALAFNLLLGYGGLLSFGHAAYFGMASYIA 90

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                 +GLS  L I    + +   G++ G  +++ +G Y ++ TL ++++     ++  
Sbjct: 91  AYGAKVWGLSPELAILAGTLTAALLGLVFGALAIRRQGIYFSMITLALAQMVFFFSLQAA 150

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
             T G+ GI    R                F    +  +  +Y ++  + FL   +I  +
Sbjct: 151 -FTGGEDGIQAVPR-------------GQLFGVISLADDRVLYALVALIFFLGLLLIYRI 196

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +      + IRDN+    SL       KL+ F +S+   G+AGA  A      S    
Sbjct: 197 IHSPFGQVLKAIRDNEPRAVSLGYRASQYKLAVFVLSTTLAGLAGATKAIVFQLASLTDV 256

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            +S +  V+ + ++GGM ++        +++ +                     F    T
Sbjct: 257 HWSMSGEVVLMTLVGGMGTVFGPIIGAFVIVAMENYLA---------------QFGAWVT 301

Query: 322 TLMVIALFLVILMRSHSLLRL 342
            +  +   + +++    ++ L
Sbjct: 302 IIQGVVFVICVILFREGIVGL 322


>gi|149375496|ref|ZP_01893266.1| inner-membrane translocator [Marinobacter algicola DG893]
 gi|149360201|gb|EDM48655.1| inner-membrane translocator [Marinobacter algicola DG893]
          Length = 287

 Score = 67.6 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 92/302 (30%), Gaps = 26/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL++V G +G+L+L     Y +GAY      +  G      I  
Sbjct: 10  LINGLQYGLLLFLIASGLTLVFGVMGILNLAHGSMYMVGAYLVWYFVAVTGSFTVSAILS 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +  G   +I  +   +          L+   +          +               
Sbjct: 70  AVIALGLGIVIERVLIQRLYNRNHLDQVLLTIGMIFVFNSLQSILWGNDPYGVAVPDALS 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                               Y ++  +       ++A++   + +T +    R    N++
Sbjct: 130 GSVPFTDN----------SSYPVYRIFAAFICIAIAAALYFVVSKTRLGMLIRAGESNRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+      ++G   A  R  +          I    +V++GGM
Sbjct: 180 MVEALGVNIKSLYTIVFAIGVMLAAVSGIIAAPMRSIVPGMGESVL--ITCFVVVVIGGM 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  +      +     N               ++ I + LV+L++   
Sbjct: 238 GSIKGAFVGALLVGVISTFAAVLMPTMSN--------------MIIYIFMILVLLVKPQG 283

Query: 339 LL 340
           L 
Sbjct: 284 LF 285


>gi|90420825|ref|ZP_01228731.1| permease protein, ABC-type sugar transporter [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90335116|gb|EAS48877.1| permease protein, ABC-type sugar transporter [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 356

 Score = 67.6 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 89/312 (28%), Gaps = 18/312 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++ ++   +  +      S   +  +  Q+ I  + A   S+V+ + G + L+      
Sbjct: 49  VIVLLLSVAVFGVVSNNFFSAFNLSLIMQQVAIVGILAAAQSLVILTAG-IDLSVAAVMV 107

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     L    GL + L I    ++    G++ G+   K R           +     
Sbjct: 108 MISVIMGRLSVEAGLPVPLAILSGFVVGTLTGLLNGILVTKVRLPPFITTLGTWNVFLAL 167

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                   T     +     L               F   F I    + + ++ M  +  
Sbjct: 168 NYYFSNRETIRSQTLDAEAPL------------LKLFGERFNIGGAVLTWGVVLMVVIFV 215

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L RTA       I D+++A            +S + VS     +A          
Sbjct: 216 VLWFVLNRTAWGRHVYAIGDDKEAAELSGIRTDRTLISVYMVSGFICALAAWASIGRVGS 275

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           +SP  F  +    + ++VI      GG  S+        I+                 L 
Sbjct: 276 VSPTSFFEANLESITAVVIGGISLFGGRGSIIGPMIGALIVGVFNSGLRLAGVDVLWQLF 335

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 336 ATGWLIILAVAI 347


>gi|323699118|ref|ZP_08111030.1| inner-membrane translocator [Desulfovibrio sp. ND132]
 gi|323459050|gb|EGB14915.1| inner-membrane translocator [Desulfovibrio desulfuricans ND132]
          Length = 295

 Score = 67.6 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 96/306 (31%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   IY + A G  ++  +  +++        +GAY    L  ++ +       +
Sbjct: 8   IVNGLVVGSIYSLVALGFVVIYKATKVVNFAQGELVMVGAYVCFALTVQFHIPFIWAFLI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + S   G+ +    L+       I+ ++++    ++L     +  G         L  
Sbjct: 68  TLVFSVLLGLAIERMVLRPLIGEEHISVIMVTIGMSSVLKSLVQLFWGTQIRVYPQVLPT 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                           + +          +    L A    + + +    A R    +Q+
Sbjct: 128 EPVM-----------IAGLPVAPVYIAAFILSAVLFAVFSAFFKYSRTGVAMRATAFDQQ 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   I      ++ ++     + G            +       + V   VILGG+
Sbjct: 177 AAQSMGIGIKNIFAMSWCIACIVSAVGGVILGNIN---GINAHIGHLGLKVFPAVILGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL   A    I+  +  +C G    +                    I L ++++++ + 
Sbjct: 234 DSLLGAALGGLIIGVLENVCDGAARQFLG--------LGGFREVAAFIVLVVILMIKPYG 285

Query: 339 LLRLRT 344
           L   + 
Sbjct: 286 LFGTKE 291


>gi|260427027|ref|ZP_05781006.1| ribose transport system permease protein RbsC [Citreicella sp.
           SE45]
 gi|260421519|gb|EEX14770.1| ribose transport system permease protein RbsC [Citreicella sp.
           SE45]
          Length = 361

 Score = 67.6 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 87/313 (27%), Gaps = 18/313 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +L     +   +      S   +  +  Q+ I  + A   S++V + G + L+     
Sbjct: 53  VIVLLGAVAVFGVVSGSKFFSAFNLTLIMQQVSIIGILAAAQSLIVLTAG-IDLSVAAIM 111

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +     L    G+  +L + ++ +   A GM  G    + +                
Sbjct: 112 VLMSVIAGNLAVYSGVPAFLALIIAFVGGTAAGMFNGFLVTRVKLPPFITT--------- 162

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +    I           +         +      F  +  I    + Y  + M  + 
Sbjct: 163 ---LGTWSIFYALNLWLSGAQSIRSQDIDSAAPLLKVFGETIAIGPARITYGSILMVLVF 219

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L RTA       + D+ +A            +S +A++    G+A         
Sbjct: 220 LVLWYMLNRTAWGRHVYAVGDDAEAAELAGIRTGRTLMSVYALAGFVCGIAAWASIGRVG 279

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            ISP  F       + ++VI      GG  S+        I+                 +
Sbjct: 280 SISPQAFYEGNLQSITAVVIGGISLFGGRGSILGALFGALIVGVFQSGLRLAGVDVLWQV 339

Query: 310 LKFDCSFNMRHTT 322
                   +    
Sbjct: 340 FAIGWLIIIAVAI 352


>gi|118592796|ref|ZP_01550185.1| ABC transporter permease protein [Stappia aggregata IAM 12614]
 gi|118434566|gb|EAV41218.1| ABC transporter permease protein [Stappia aggregata IAM 12614]
          Length = 287

 Score = 67.6 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 97/304 (31%), Gaps = 25/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I    +   +Y +FA GLS++ G + L+++       + A+  + + +  GLS  L + +
Sbjct: 7   ILQGILLGGLYALFAAGLSLIFGVMRLVNIAHGDFIVLAAFLGLTITTTLGLSPLLALIL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +    G  +    L        +  L+++     I+           G+        
Sbjct: 67  VVPVMAGIGYGLQRLVLNQTLGDDILPPLLVTFGLSVIIQN---------GLLEIYSADP 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +  +L          +   +    +      + A +     R+A+  A+R + D Q 
Sbjct: 118 QKISAGALETASVALPGDLNIGVLPLLMFGVAVAVIAGLQWIFYRSALGRAFRAVSDKQD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +          A A+S A +G+AG F                  I     VI+GG+
Sbjct: 178 IAQLMGLNKAHIFGLAMALSLAVVGLAGVFLGIRTSF--DPSIGPGRLIFGFEAVIIGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        IL     +   +N  +                    IA  +V+ +R   
Sbjct: 236 GNLWGTLIGGIILGVSQNIGAQINPGW--------------QLLAGHIAFLIVLAVRPRG 281

Query: 339 LLRL 342
           L   
Sbjct: 282 LFPR 285


>gi|170290866|ref|YP_001737682.1| ABC-type branched-chain amino acid transport system, permease
           component [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174946|gb|ACB07999.1| ABC-type branched-chain amino acid transport system, permease
           component [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 304

 Score = 67.6 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 91/304 (29%), Gaps = 17/304 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   IY     GL+++ G + L +      Y +GA+    L S  G   ++L P++A+ 
Sbjct: 15  LMMGGIYAAIGVGLTMIFGVMKLSNFAHGEFYMLGAFLTYTLVSALGSDPYILAPLAAIA 74

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
            G  G+I+           L  A    +  FQ++      I      + +A  ++     
Sbjct: 75  VGFLGIILNKLVFLSLYKELREAKGAAAFFFQDLRFIMLTIGLSILFVDLALVIWGPIPI 134

Query: 163 VRSLIRFFRFP--SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
               +             + +      +        + ++LR T    A R    N  A 
Sbjct: 135 AIPSVLTSHIIKLPGGFSFSLARIMTFIIALASLIILYMFLRVTKTGKAIRATAQNPSAA 194

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             +             +S+A   +AG       +                 +VI GGM +
Sbjct: 195 ALVGIDTYRIYDVTMFISTALAALAGGILGPIYNV--YPTMGLDVVAKAFVVVITGGMGN 252

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +     A  ++     L                         +  + + LV+  R   +L
Sbjct: 253 IIGSILAGFLIGLAEGLGGVFLG-------------TEYRQVVAFVIMILVLWFRPQGIL 299

Query: 341 RLRT 344
             R 
Sbjct: 300 GGRR 303


>gi|222839546|gb|EEE77883.1| predicted protein [Populus trichocarpa]
          Length = 419

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 73/212 (34%), Gaps = 8/212 (3%)

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           + TL ++  FQ +  +    T G+ G+      +   +                   I  
Sbjct: 1   MITLAVAAAFQTLASQLSEWTGGEDGLSFKLPEWLSPSFEPFENEVLGVLIDG---RIIT 57

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           YY+L  +  +    +L +  +      + IR+N+    ++   ++  +  +  +S+ F  
Sbjct: 58  YYLLFVLAVVLVLALLRIVNSPFGRVLQAIRENEFRAEAIGYRVVVYRTLSSVLSALFAC 117

Query: 244 MAGAFFAASRDR-ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG----VVELC 298
           +AGA  A             F   +  + IV++GGM ++   A  + + +     + +L 
Sbjct: 118 VAGAMLALWLRYNGPDTSLSFEIMMDCLLIVVIGGMGTIYGAAIGSVLFLIAQSYLQDLL 177

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
              +    +           R    + +   L
Sbjct: 178 RVASEAAHSLPWLAALLSPDRWLLWLGVLFVL 209


>gi|222084755|ref|YP_002543284.1| fructose ABC transporter [Agrobacterium radiobacter K84]
 gi|221722203|gb|ACM25359.1| fructose ABC transporter [Agrobacterium radiobacter K84]
          Length = 354

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 91/314 (28%), Gaps = 19/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +   +  F   G   S   +  +  QI I  + A   ++V+ + G + L+  +  
Sbjct: 45  LIVLVMAIIIFGFAIGGRFFSAYTLTLILQQIAIVGILAAAQTLVILTAG-IDLSIGVIM 103

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I +     +   YGL   + I       G CG++ G      +                
Sbjct: 104 VISSVVMGNVAVTYGLPTPVAIIAGMAAGGLCGLLNGFLVANMKLPPF------------ 151

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    I      IY A+                 F  SF +    +   ++ M  L 
Sbjct: 152 IVTLGTWNIVMATNFIYSANETIRDTDVDEKAPLLHLFAVSFRLGGAVLTLGVIAMVLLV 211

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L  TA       + D+ +A            L+ + VS      A         
Sbjct: 212 VGLWYILNHTAWGRHVYAVGDDPEAAKLSGIQTKKVLLAVYGVSGLIAAFAAWVSIGRNG 271

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            +SP       N+  I+  ++GG+       S+        I+  V      +       
Sbjct: 272 SVSPSSAVTDFNLQAITATVIGGISLFGGRGSILGTLFGAMIVGVVSMGLNMLGADPQWK 331

Query: 309 LLKFDCSFNMRHTT 322
           +L            
Sbjct: 332 VLLTGVLIIGAVAI 345


>gi|170738889|ref|YP_001767544.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168193163|gb|ACA15110.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 296

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 58/303 (19%), Positives = 109/303 (35%), Gaps = 27/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      ++VM A GLSI+ G LG+++      + IGAY+  +       S WL + +
Sbjct: 15  LFSGVALGAVFVMLALGLSIIFGMLGIVNFAHGNFFMIGAYA-GVFVLERTGSFWLALLL 73

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ GA G+++    ++          L+++     +L++   I  G  G+ VA     
Sbjct: 74  GPLLVGALGLVVERLLIRPLAGRSPDDALLLTFGLGYVLVEGVRILFGSDGLPVATPEAL 133

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                 ++ ++  +V+  +  +   +   L RT +    R    + +
Sbjct: 134 SGV----------ADLGIGLFPVYRLFVIGVVALVLLLLWWALERTRLGLIVRAGARDPE 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   I    L  F +  A   + G   A  R          +      ++ ++GGM
Sbjct: 184 ILRVLGVDIQRLWLWVFGLGIALAALGGVLAAPMRSV--NPEMGSAVLSEAFAVTVIGGM 241

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL     A  ++  VV L   +     N                +   + LV+L R H 
Sbjct: 242 GSLLGSVAAGLLVGIVVSLTALVAPEMAN--------------IAVFAFMALVLLARPHG 287

Query: 339 LLR 341
           L  
Sbjct: 288 LFG 290


>gi|319785007|ref|YP_004144483.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170895|gb|ADV14433.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 348

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 56/315 (17%), Positives = 117/315 (37%), Gaps = 19/315 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++       + +   V  ++    +    S   I S+ +    Y+  A   +++ G  GL
Sbjct: 17  VQRQTRSGRIAMTLAVLAMIAVAVMPWWASTGTIRSVLVL-CCYIAVAQMWNLLAGYAGL 75

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           +S+          Y+  +L   YG++ ++ + +S ++  A  + + L   +  G Y +I 
Sbjct: 76  VSVGQHAFMGAAGYALFVLAQTYGINPFVAVFLSLLVPAALAVPIYLLLHRLDGPYFSIG 135

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           T +++E+F+        + +G        +                   S     + M  
Sbjct: 136 TWVVAEVFRLTASNLPLVNSGAGMSLRVMK-----------------DYSAFERNVAMSL 178

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +  GM  ++     WL R+    A   +RDN  A  S    ++  +   +  S+   G+A
Sbjct: 179 LCAGMLLVTLGGSYWLLRSRFGLALIAMRDNPVAAASQGVNVVKLRFLIYVASAVGCGLA 238

Query: 246 GAFFAASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           GA +  ++ RI+P   F      + I IV++GG+ S+  +   + I              
Sbjct: 239 GAIYFMAQLRITPGSAFDPMWANVAIFIVMVGGIGSIEGVLIGSLIFFIADRWFGEYGAT 298

Query: 305 YFNSLLKFDCSFNMR 319
           YF  L        + 
Sbjct: 299 YFVVLGLMTLLVALY 313


>gi|300311880|ref|YP_003775972.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300074665|gb|ADJ64064.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 304

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 96/304 (31%), Gaps = 13/304 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            S  +  L+Y + A G  ++  + G+ +          A + V L  +    +W  I  +
Sbjct: 9   LSGLLSGLMYSLVALGFVLIYKASGVFNFAQGAMVYFAALAVVGLMEKGMP-MWAAIIGA 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            ++    G+      L+   +   I   + +      L    P+  G     +       
Sbjct: 68  FVVMILVGLATERFVLRKLVNQPPITLFMATIGLTFFLEGLGPLLFGSEVRPI------- 120

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +          S  +    F  +    +  L A++ L+ ++T +  A R + D+ +A
Sbjct: 121 DLGIVDEPIQSVMDSIGIGISKFDLFASGMVVALVAALALFFQKTKVGRALRAVADDHQA 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             SL   +       + V+     +AG  + +               +  + ++ILGG T
Sbjct: 181 ALSLGIPLQHIWAVVWGVAGFVALIAGLLWGSRNGVQFALTMT---ALKALPVLILGGFT 237

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        I+    +L               +          +   L   +L+R   L
Sbjct: 238 SIPGAIVGGLIIGASEKLAEIYIPPVMQDAFGGNFGGIEGWFPYVFALL--FLLVRPEGL 295

Query: 340 LRLR 343
              R
Sbjct: 296 FGER 299


>gi|296157553|ref|ZP_06840388.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295892325|gb|EFG72108.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 294

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 106/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGVPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGFS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +GL  W+++ ++ +I G  GM +    L++      +  L+++     ++        G
Sbjct: 63  YFGLPYWVMLVLAPLIVGLFGMAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 123 SSGQPYDVPSALSGAT----------NLGFMFLPNYRAWVVVASLAVCFATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGINVPLMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +  L                  +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSIMGSILTGLMLGVIEGLTRVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + LV+L+R   L  
Sbjct: 277 IMALVLLVRPAGLFG 291


>gi|222081678|ref|YP_002541043.1| branched-chain amino acid ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221726357|gb|ACM29446.1| branched-chain amino acid ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 290

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 95/304 (31%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G++++ G L  ++      Y +G +         GLS    I V
Sbjct: 9   IINGIVTGSVYAIVAVGMTMIFGVLRAINFAHGEYYMLGTFGAWFAIDYLGLSYEASIIV 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +     ++G   ++      A + ++ +     +L     +  G            
Sbjct: 69  GVLSTIVVAYVVGKLVMQRMVGAPAESGVLATLGIALVLQNTVILVFG------------ 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G    S                    +L+    +   + L +  + +  + R +  N +
Sbjct: 117 GGYKFFSGGYIEPVSILGFSLAEQRIIILVVCLLVFIGLELMVTYSRMGKSMRAVSQNVE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L  F + +A   ++G   A     +   M         + I+I+GG+
Sbjct: 177 CCEVVGIDVPQVVLRTFVLGAALAALSGVLTAPVNVSVYGGM-GELITFKTLPIIIMGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++     A  IL     L        F   + F               L L+++ R H 
Sbjct: 236 GNVRGTFFAAMILGIAESLVATYVGLQFRDTVGFAT-------------LILMLMWRPHG 282

Query: 339 LLRL 342
           L   
Sbjct: 283 LFST 286


>gi|254487170|ref|ZP_05100375.1| inner-membrane translocator [Roseobacter sp. GAI101]
 gi|214044039|gb|EEB84677.1| inner-membrane translocator [Roseobacter sp. GAI101]
          Length = 353

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 89/313 (28%), Gaps = 18/313 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +   +   L      S   +  +  Q+ I  +     S+V+ + G + L+     
Sbjct: 45  LIVLVLSLIVFGILLGSKFFSPFALTLILQQVAIVGIVGAAQSLVILTAG-IDLSVGAIM 103

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +        RYGL   + +    +   ACG + G      +     +   +   I  
Sbjct: 104 VLSSVVMGQFSFRYGLPPEIAVVCGLLCGTACGFVNGWLVAYMKLPPFIVTLGMWQIILA 163

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           +  +     T     I     L               F     I      Y ++ +  L 
Sbjct: 164 SNFLYSANETIRSQDISANAPL------------LQLFGEKINIGGAIFTYGVIFLVVLV 211

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   LR TA       + D+  A       +    +S + ++      AG        
Sbjct: 212 LFLAYVLRHTAWGRHVYAVGDDPDAAELSGVNVKRVLVSVYMLAGLICAFAGWALIGRIG 271

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   + +    + ++VI      GG  S+  +     I+         M      + 
Sbjct: 272 SVSPTSGQLANIESITAVVIGGISLFGGRGSVLGMLFGALIVGVFTLGLRLMGADAQWTY 331

Query: 310 LKFDCSFNMRHTT 322
           L            
Sbjct: 332 LLIGALIIAAVAV 344


>gi|33601732|ref|NP_889292.1| permease component of ABC transporter protein [Bordetella
           bronchiseptica RB50]
 gi|33576169|emb|CAE33248.1| permease component of ABC transporter protein [Bordetella
           bronchiseptica RB50]
          Length = 291

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 93/304 (30%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IYV+ A GLS++ G L +++      + +GAY+ V++          ++  
Sbjct: 10  LFTGLALGAIYVLLAVGLSLIFGMLTVVNFAHGAFFMLGAYAGVVVLGLTQNFWAAMLLA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++    +          G  +    L+   +   ++   + +       +       
Sbjct: 70  PLAVAAVGMVCERWLIRPLYGRGIDYPLLLTFGLAYMLVEAVRMLFGRAGLPFDTPEALA 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T              F  +  +  +++     L  ++ L + +TA     R    +  
Sbjct: 130 GFT-----------NLGFADFPTYRLFIIAVTIVLLLALWLLIEKTAFGLIVRAGARDPV 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +    L  F + +    +AG   A  +          S  I+   + ++GGM
Sbjct: 179 IVRVLGIDVSRVWLLVFGLGTGIAALAGVLAAPLQGV--SPEMGTSVLIVAFVVTVVGGM 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL     A  ++     +                  F       M + +  V+L R   
Sbjct: 237 GSLMGAVVAGLLVGVAESMSVLF--------------FPEAAKVSMFVIMAAVLLWRPQG 282

Query: 339 LLRL 342
           L   
Sbjct: 283 LFGR 286


>gi|323527859|ref|YP_004230012.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
 gi|323384861|gb|ADX56952.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
          Length = 294

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 106/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGFS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +G+  W ++ ++ +I G  G+++    L++      +  L+++     ++        G
Sbjct: 63  YFGVPYWPMLIIAPLIVGLFGVLIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 123 SSGQPYDVPSALSGAT----------NLGFMFLPNYRAWVVVASLIVCFATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGINVPLMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +  L                  +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSIMGSILTGLMLGVIEGLTRVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + LV+L+R   L  
Sbjct: 277 IMALVLLVRPAGLFG 291


>gi|254518022|ref|ZP_05130078.1| ribose ABC transporter [Clostridium sp. 7_2_43FAA]
 gi|226911771|gb|EEH96972.1| ribose ABC transporter [Clostridium sp. 7_2_43FAA]
          Length = 312

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 96/312 (30%), Gaps = 27/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+   ++     +  S   I ++  Q+ +  + A G++ V+   G + L+     A
Sbjct: 15  LIGLVLLCAIITFVTPSFLSLSNITNVFTQVSVNAIIAVGMTFVI-LTGGIDLSVGSTLA 73

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I       +    G    L I V+A++  A G++ GL   K +      ATL    IF+ 
Sbjct: 74  ISGALSASIIKSTGSVT-LAIIVAALVGIAIGLVNGLLISKGKLQAFI-ATLATMTIFRG 131

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             + +        G  ++             I F   P    +    +   +L       
Sbjct: 132 ATLVF------TNGTPISKLPEKFVNIGNGKIGFMPIPVIITVIVSIIAIYVL------- 178

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +T        +  N+ +           K   + VS     +AG    +    
Sbjct: 179 ------SQTRFGRYLYALGGNEDSARLSGINTDKIKTLVYVVSGFASSIAGVIITSRIAS 232

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            SP+     E   + ++VI      GG   ++       I+  +      MN   F   +
Sbjct: 233 ASPNAGTSFELDAIAAVVIGGTSLAGGEGKITGTLIGALIIGVLNNGLNLMNVSPFYQSI 292

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 293 VKGLVILIAVLL 304


>gi|170749705|ref|YP_001755965.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
 gi|170656227|gb|ACB25282.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
          Length = 289

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 91/304 (29%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      +Y + A G  +     G ++        +GA     LG   G  +   I +
Sbjct: 6   LVSGLGLGSMYGLVALGFHVTYAVSGTVNFAQGSVVTLGAVLAYALGVTLGWPMPAAIVL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G+++    ++      + A L+ +     +L      T GK    +   L  
Sbjct: 66  ALAGCALFGLVVERALVRPFVARGSDAWLLATVAGGIVLDNTVLFTFGKEPRSLPSPLAT 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +     +    +  V+     + +               RRT +      +  N  
Sbjct: 126 KPVEILGTGIYPLQLAIPVVGIALAFAIRTVF-----------RRTDLGRVLLAVAQNAD 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +      AFA+S+   G+AG   A                I   ++ ILGG+
Sbjct: 175 AARLMGIDVRRTVACAFALSAVLAGIAGLLIAPLFSV--SAELGTLFGIKAFAVAILGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S + +  A  +   V           +  L+ F               + L + +R   
Sbjct: 233 GSATGVILAGLLYGLVEAGVTATLGSTYTQLVVFS-------------VIILALTLRPDG 279

Query: 339 LLRL 342
           LL  
Sbjct: 280 LLGR 283


>gi|27378726|ref|NP_770255.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351875|dbj|BAC48880.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 290

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 95/303 (31%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A G++++ G L  ++      Y +G +        + L   + + +
Sbjct: 9   VVNGIVSGSVYAIVAVGMTMIFGVLRAINFAHGEYYMLGTFGAWFAIEYFDLPYPVAVVI 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++G   ++      A A ++ +     IL     +  G +          
Sbjct: 69  GVVATAVIAVVVGNFVMQRIVGAPAEAGVLATLGVALILQNTVILVFGGS---------- 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S                    +++    +   + L +  + +  A R +  N +
Sbjct: 119 --YKFFSGGYIEPVTLFGFTLAEQRILIIIVSLIVFVGLELMVTYSRMGKAMRAVSQNIE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L  F + +    ++G   A     +   M         + I+I+GG+
Sbjct: 177 CCAVVGIDVRHIALWTFILGAGLAALSGVLTAPVNVSVYGGM-GELITFKTLPIIIMGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++     A  IL     L        F   + F               L LV++ R H 
Sbjct: 236 GNVRGTFVAAMILGIAESLVATYVGLQFRDTVGFAT-------------LMLVLMWRPHG 282

Query: 339 LLR 341
           L  
Sbjct: 283 LFS 285


>gi|118589785|ref|ZP_01547190.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Stappia aggregata IAM 12614]
 gi|118437871|gb|EAV44507.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Stappia aggregata IAM 12614]
          Length = 290

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 102/310 (32%), Gaps = 27/310 (8%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y+    +   IY + A G+++V   L    L       +GA+  + + +  G+S  
Sbjct: 6   LINFYVIPGIVLGSIYALGAVGITLVFAILRYAHLAHGDLATLGAFIALAVVTGLGVSPL 65

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + +P++ + + A  + +     +   +   I T++ S     ++     +  G      +
Sbjct: 66  VALPIAIIATAAVAVGIDKVFYEHLRERPKIVTVMASLGIALMIRAVVQVVWGVDTETYS 125

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             +          IR                  ++ M  L   + L+L R+    A R +
Sbjct: 126 RGIVRPENYFGLRIRDREI------------LTVIAMIALVGGLQLFLTRSKWGKAMRAM 173

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            DN               +  + +       +G F   + +     M  +   + + +  
Sbjct: 174 SDNPNLALLSGIDNKKVVMLTWVIVGGLCAASGVFLGLNTEL--KSMMGWQMLLPMFAAA 231

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ILGG+  +        ++    EL   +    + + + F               L  ++L
Sbjct: 232 ILGGVGRIEGAVLGGLVVGIAEELSVLVIPSEYKAAMAF-------------AILLFMLL 278

Query: 334 MRSHSLLRLR 343
           +R   LL+ +
Sbjct: 279 VRPTGLLKGK 288


>gi|114769197|ref|ZP_01446823.1| fructose ABC transporter, permease protein [alpha proteobacterium
           HTCC2255]
 gi|114550114|gb|EAU52995.1| fructose ABC transporter, permease protein [alpha proteobacterium
           HTCC2255]
          Length = 359

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 91/303 (30%), Gaps = 17/303 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L+ +V  L+  +      S   +  +  Q+ +  + A   ++++ + G + L+      
Sbjct: 51  ALVLIVSILIFGIIAPRFLSPGVLSLVLQQVTVIGIVAIAQTLIILTAG-IDLSVGAILV 109

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +  +    L   YG+ + + I     I    G   G    K +     +    +S     
Sbjct: 110 LSTFVMGRLSVSYGVPLPIAIAAGMAIGTLMGAFNGFLVAKIKLPPFIVTLGTLSVFTAL 169

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L               ++ +        +    +   ++   +   + Y  + +  L+A
Sbjct: 170 KLW-----------YSGSESIRNSDIEANAPSLLWFGEAAARPFGATITYGGIALILLAA 218

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L+ TA       I D+ +A            +S +AV+    G            
Sbjct: 219 VFWFILQHTAWGRHVYAIGDDPEAAALSGIKTDRTLISVYAVAGLICGFGAWVAIGRVGS 278

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           ISP  F+      + ++VI      GG  S+        I+              +  + 
Sbjct: 279 ISPISFEEINLATITAVVIGGTSLFGGRGSIPGSVLGALIVGVFTTGLSLAGVDDYWQMF 338

Query: 311 KFD 313
              
Sbjct: 339 AVG 341


>gi|114319351|ref|YP_741034.1| inner-membrane translocator [Alkalilimnicola ehrlichii MLHE-1]
 gi|114225745|gb|ABI55544.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Alkalilimnicola ehrlichii MLHE-1]
          Length = 567

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/291 (12%), Positives = 86/291 (29%), Gaps = 17/291 (5%)

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
           +I+ G + ++++       IGAY   ++ + +   +  L     + +     I       
Sbjct: 292 AIIFGLMRVINMAHGELLMIGAYVTFLVQNFFVAFMPGLFNFYLVAAVPVAFIATALVGI 351

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
                  +   +     + +L  W         +        +                 
Sbjct: 352 AMER--GVIRFLYKRPLETLLATWGISLILIQTMRTLFGAQNVRVASPEWFSGSVQLMQG 409

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
           V        V+L   F+ A +   ++RT +    R +  N++   +L  +     +  FA
Sbjct: 410 VSLSTSRVGVILFAIFVVALVWFLMQRTRLGLEVRAVMQNREMAAALGVSANRVDMWTFA 469

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
             +   G+ G   +   +         +  +    +V+LGG+ ++     +   +    +
Sbjct: 470 AGAGVAGLGGVALSQIVNV--GPQLGQAYIVDSFMVVVLGGVGNVMGSVVSALGMGVFSK 527

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
               +                     L+  A+ L I  R   +  L+  S 
Sbjct: 528 FLEPVTGAVMAK-------------ILLFTAIILFIQWRPQGIFALKGRSA 565


>gi|255658014|ref|ZP_05403423.1| urea ABC transporter, permease protein UrtB [Mitsuokella multacida
           DSM 20544]
 gi|260850217|gb|EEX70224.1| urea ABC transporter, permease protein UrtB [Mitsuokella multacida
           DSM 20544]
          Length = 296

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 84/295 (28%), Gaps = 31/295 (10%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL-----SIWLLIPVSAMISGACGMIMGL 112
           I  G +G++++       +GAY+  ++             ++ I ++ +++   GMI+ +
Sbjct: 26  ITFGLMGIINMAHGEFIMVGAYTTYVVQGLLMPVLGDGYFFVSIVLAFLVAAVFGMILEV 85

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
             ++        + L    +   +    + I        VA                   
Sbjct: 86  VVIRRLYGRPTDSLLATWGVSLILQQLARSIFGAPNVNVVAPAFLGG-----------SI 134

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
               V       ++L  +      +  +L  T      R    N+     L         
Sbjct: 135 SLLGVSMSYKRLFILALVLACLVGVWAFLYHTDFGRKMRACIQNRDMAQCLGIRSKRIDC 194

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             FA+ S   G+AG                 +  +    +V+LGG+  L        I+ 
Sbjct: 195 LTFALGSGLAGIAGCALTLLGSI--GPTLGQNYIVDTFMVVVLGGVGKLIGCISGALIIG 252

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
               +                 S        ++  + L +  +   L  LR+ S 
Sbjct: 253 VAGTVFEF-------------GSTASIAKAAVLFLVILFLQKKPQGLFALRSRSL 294


>gi|255291857|dbj|BAH90352.1| branched-chain amino acid ABC transporter, permease protein
           [uncultured bacterium]
 gi|255292658|dbj|BAH89767.1| branched-chain amino acid ABC transporter, permease protein
           [uncultured bacterium]
 gi|255292839|dbj|BAH89940.1| branched-chain amino acid ABC transporter, permease protein
           [uncultured bacterium]
          Length = 324

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 59/331 (17%), Positives = 119/331 (35%), Gaps = 37/331 (11%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   I  LL  V    L +   +     Y   +G    I V  A   ++V G  G  +L 
Sbjct: 2   KNPLIRALLHSVILPALLVVAVSFFISGYQLVLGFGFFIAVGLAISWNLVGGFAGQFALG 61

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
             +   IG+Y+   + +R G  I +   V A++S A         L+ R  Y ++AT+ +
Sbjct: 62  HSMYVGIGSYTVAFMLTRLGTPIPIAFLVGALLSAALAAGSTALFLRMRDAYFSVATMAL 121

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +    + +I                      T           P    I ++ +++V   
Sbjct: 122 ALACLSAVI---------------------ITPQLGATAGIILPGDLFIDDVTLFWVSGA 160

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           M  ++ +I +++R +        +RD++ A        +  K S  A+S+A     GA  
Sbjct: 161 MAIVALAISVFIRHSGYGLELMAMRDDETAAAESGVNALLMKCSIMAISAAIASCFGALI 220

Query: 250 AASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              +  + P+  F     I +I + ++GG+ ++       A++ G+ +            
Sbjct: 221 TLQKFTVDPNSAFSMLWTIQMIMMSVIGGLGTVWGPVLGAAVVFGLQQGLDSF------- 273

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
                    + +     + L L+I +    +
Sbjct: 274 --------PVWNMLATAVILLLIIRLAPGGI 296


>gi|300312954|ref|YP_003777046.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300075739|gb|ADJ65138.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 304

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 101/309 (32%), Gaps = 16/309 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + A GL+++ G +  ++L     + I       + +    S WL + V
Sbjct: 9   VLNSLQFGVMLFLIASGLTLIFGVMNFVNLAHGSFFMI-GAYVAAVVAGASGSFWLGLLV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   + A G ++     +       +  ++ +  F  I      +  G   + +     F
Sbjct: 68  ALPATAALGFLLEWVVFRRLYQKDHMVQVLATFAFILIFNDGVRMIWGPQPLPLNMPAAF 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                + Y  +   V+     ++ ++   + RT I    R   +N +
Sbjct: 128 AGP----------VNLFGLPYSSYRLLVMAVGVVVAIALYFLINRTRIGMWVRAGANNLE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              ++   I       F+       +AG                    I+   +V++GG+
Sbjct: 178 MVTAMGINIRLLFRLVFSFGLLLAALAGIMLGPLVAV--QAGMGDDVLILAFVVVVIGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335
            S+   A    I+  V  L   +    F   L  D +        + ++ + +  V+  R
Sbjct: 236 GSVPGAAIGALIVGVVDTLGRSLLPQLFALFLSADAAASVGPALGSMMIYLVMIAVLFWR 295

Query: 336 SHSLLRLRT 344
              L   RT
Sbjct: 296 PSGLFPART 304


>gi|254474970|ref|ZP_05088356.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria sp. R11]
 gi|214029213|gb|EEB70048.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria sp. R11]
          Length = 336

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 81/312 (25%), Gaps = 19/312 (6%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY----SYVILGSRYGLSIWLLIPVSAMISG 104
             + A G+++V   L   +       A G          L S       L   + A+ +G
Sbjct: 25  LAIGALGVTLVYSVLRFSNFAHGDTMAFGTMITILVTWWLQSLGVSFGPLPTALLALPAG 84

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL----- 159
               +  +            A      +F  + +    + NG     +            
Sbjct: 85  IAATMALMLFTDRTVYKFYRAQKAKPVVFVMVSLGVMFMMNGLVRFVIGPGDQRFADGER 144

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                   +        +  +      ++    + A +  +L +T    + R   DN+  
Sbjct: 145 FLISARDFKAMTGLREGLAIKTTQGITVITAVIVVALLFWFLNKTRTGKSMRAYSDNEDL 204

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                       +  + + ++   +AG  +   +         F   + + +  I+GG+ 
Sbjct: 205 ALLSGINPERVVMYTWLIVASLATIAGVLYGLDKSF--KPFTYFQLLLPIFAAAIVGGLG 262

Query: 280 SLSKIAKATAILIGVVE--------LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           S         I+             +   +                     +    L +V
Sbjct: 263 SPIGAIAGGFIIAFSEVTITYAWKKVLTYVLPESLKPDGLVQLLSTDYKFAVSFTILVIV 322

Query: 332 ILMRSHSLLRLR 343
           +L +   L + +
Sbjct: 323 LLFKPTGLFKGK 334


>gi|120609479|ref|YP_969157.1| inner-membrane translocator [Acidovorax citrulli AAC00-1]
 gi|120587943|gb|ABM31383.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 309

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 93/305 (30%), Gaps = 16/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y + A G  ++  + G+ +          A +           +     + A +
Sbjct: 12  LMAGMLYALVALGFVLIFKASGVFNFAQGAMVLFAALAMARFAEWLPRWLGFDSLLLANV 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
              C  +  +  + +  + LA+  L+  E    ++              +          
Sbjct: 72  LAFCAAVACMVGVAWLVERLALRHLVNQEPIALLMATLGITYFLDGAGQLIFGSSTYKID 131

Query: 163 VRSLIRFFRFPSSFVIYEIFM----YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           V           +     + +     Y  +    L A + L+ ++T    A R + D+ +
Sbjct: 132 VGMPKDPMIVLENVFEGGLLLSKEDLYAAVVAAALVALLSLFFQKTRTGRALRAVADDHQ 191

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +    +  ++V      +AG  + +               +    +VILGG+
Sbjct: 192 AAQSIGIPLSRIWVIVWSVGGIVALVAGIIWGSKLGVQFSIS---LVALKAFPVVILGGL 248

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        ++    ++       +    ++   +          +     +L+R   
Sbjct: 249 TSVPGAIVGGLLIGVGEKVSEIYLGPFLGGGIENWFA---------YVLALGFLLIRPQG 299

Query: 339 LLRLR 343
           L   +
Sbjct: 300 LFGDK 304


>gi|89054758|ref|YP_510209.1| inner-membrane translocator [Jannaschia sp. CCS1]
 gi|88864307|gb|ABD55184.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Jannaschia sp. CCS1]
          Length = 296

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 100/303 (33%), Gaps = 23/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y +F+ G ++V G   +L+L     +  GA          G  +WL   +
Sbjct: 6   LLNGLVVSGVYALFSLGFTLVFGIQRILNLAHGAVFMTGAMV-AYYTVDGGGPLWLAFIL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++SG   +++ +   +            +       L+             +      
Sbjct: 65  AIIVSGFLSVLVEITCFRRLRRTGDEEFGGVVSSIGAGLVITTIAQQISNTQILRFPFET 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +        F    +   +   ++      +   +     +TA     R + DN+ 
Sbjct: 125 FPVVI--------FRFWDLRVSMLQLFMAGAALAMVLILGYLFYKTAFGRRVRAVTDNEH 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +        +  + ++ A  G AG     + + IS  M      +   +I+ILGG+
Sbjct: 177 AATLMGINPNRVYMQTYFLAGALAGAAGVLVGLAFNSISFVM-GEPYMMFGFAIIILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A+ +   V  L                         ++  ALFL++L+R H 
Sbjct: 236 GSIPGALLASVVFGMVQTLTIAYLPSGLTDT-------------IIFAALFLILLVRPHG 282

Query: 339 LLR 341
           LL 
Sbjct: 283 LLG 285


>gi|153011384|ref|YP_001372598.1| monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC
           49188]
 gi|151563272|gb|ABS16769.1| Monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC
           49188]
          Length = 334

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 94/314 (29%), Gaps = 20/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++   +L        +   I ++ +Q  I  + A G++ V+     + L+     
Sbjct: 27  IFIAFLLLVTILSFSNQYFLTAGNISNVLLQTSINGILAIGMTFVI-LTRGIDLSVGSVV 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+         +    +     P S  I+   G+++G+      G  ++   +       
Sbjct: 86  ALAGIVSASFATTSATAGVAGAPYSPFIAIPVGLLVGVGCGALVGTIVSRFAVPAFVATL 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +L   + +T    G      L      + +               + +   ++ +  + 
Sbjct: 146 GMLSAARGLTLIYGGGKPVPALIPDFRWIGT------------GNILGIPVPVILLAVVF 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    L R+        +  N  A  +    I   + S + +S    G+AG   +A   
Sbjct: 194 LASWWILNRSRFGRYIYAVGGNPHAANTSGINISRVRFSVYVISGGLAGLAGMILSARTG 253

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                    S  +  I+ V++      GG+  ++       I+  +      M    +  
Sbjct: 254 SA-LPQAGISYELDAIAAVVIGGTSLSGGVGRITGTLIGALIIGVMNNGLDLMGIQSYYQ 312

Query: 309 LLKFDCSFNMRHTT 322
            +            
Sbjct: 313 QVLKGALIVGAVML 326


>gi|89054648|ref|YP_510099.1| inner-membrane translocator [Jannaschia sp. CCS1]
 gi|88864197|gb|ABD55074.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Jannaschia sp. CCS1]
          Length = 443

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 114/360 (31%), Gaps = 25/360 (6%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            +        L  L  +    L +                 I + ++   G ++      
Sbjct: 88  PVPEAWSAGGLRTLIGLVLGALTIVGAILLWNAMPKGRLRGIAMLIVLIIGFTL---FRR 144

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           +  +      +I   +        GL + L  PV  +++     I+G  +L  R DYLAI
Sbjct: 145 VFDVGVDAVESIDP-ASTGFLGGLGLPVLLAWPVGGLLAAGAAWIIGKTALGLRSDYLAI 203

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF---------PSS 175
           ATL ++EI   IL     +  G   +   +R       +++   F  F          +S
Sbjct: 204 ATLGIAEIIIAILKNEDWLARGVKNVTGIERPVPYEVDLQASDGFLSFATNIGADPVTAS 263

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
            +  ++    + L +  L   +      +      R IRDN+ +  ++   +    L  F
Sbjct: 264 TITVKLLYAALFLIVVGLLIWLSEKAWNSPWGRMMRAIRDNEVSASAMGKDVKARHLQIF 323

Query: 236 AVSSAFIGMAGAFFAAS-RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
            + SA  G+AGA         +           ++  +VI+GG  +         ++  +
Sbjct: 324 ILGSAICGIAGAMMTTLDSQLVPGTYQPLRFTFLIWVMVIVGGSGNNWGAVLGGFLIWWL 383

Query: 295 VELCCGMNFYYFNSLLK-----------FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                 +      ++                S        M + L LV+      L+  R
Sbjct: 384 WVQVEPLGLLLMQTITAGMDDGYWLREHLLDSAAHMRLLTMGMILLLVLRFSPRGLIPER 443



 Score = 41.0 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 36/87 (41%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++      +LFL  G  +S     ++    LI  + A G+++  G  GL ++  +   A+
Sbjct: 17  IMLFALVAILFLGTGFVQSWNTALTIFNMGLISCIMALGVNMQWGYAGLFNVGIMGFVAL 76

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMIS 103
           G  + V++        W    +  +I 
Sbjct: 77  GGLATVLVSVEPVPEAWSAGGLRTLIG 103


>gi|33594107|ref|NP_881751.1| putative ABC transpoter permease protein [Bordetella pertussis
           Tohama I]
 gi|33564181|emb|CAE43460.1| putative ABC transpoter permease protein [Bordetella pertussis
           Tohama I]
 gi|332383523|gb|AEE68370.1| putative ABC transpoter permease protein [Bordetella pertussis CS]
          Length = 290

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/301 (14%), Positives = 100/301 (33%), Gaps = 26/301 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    Y + A G ++++G   L++      Y +GA+      +  G+   L +P 
Sbjct: 7   LINGIVLGHAYALIAIGWTLLLGVARLVNFGHGQMYMVGAFVTWWATTSAGMPYLLALPT 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +    G+ M    L+   +   ++ +IM+  F  ++     +  G  G         
Sbjct: 67  AMALGALIGLAMQRIMLRATFEQNLVSIMIMTLGFGYVIQGAASLIFGSTGQI------- 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +           +        +++    + A +   L  +      R + ++ K
Sbjct: 120 ----LDTAWSQRDIEVGELWVTWQDAAIVVAAIAVFAGLKWLLEGSRAGRLVRMVAEDPK 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   +       FA   A +  A    A     ++     F E II   +V+LGG+
Sbjct: 176 LAQLAGVDVRRIYYGVFAFEGAAVAFAAGMVAPRTPILT--SMGFEEVIITFVVVVLGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++    A   L     L   +    + +   F             + L  V+++R   
Sbjct: 234 GSVTGSYAAGVALGVFTALFSALVSPTYATAAAF-------------LVLIGVLVLRPGG 280

Query: 339 L 339
           L
Sbjct: 281 L 281


>gi|146297470|ref|YP_001181241.1| inner-membrane translocator [Caldicellulosiruptor saccharolyticus
           DSM 8903]
 gi|145411046|gb|ABP68050.1| urea ABC transporter membrane protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 347

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/311 (15%), Positives = 97/311 (31%), Gaps = 14/311 (4%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L   L L    +  +  ++  + L Y + A G+ ++ G  G+LSL   + + +GAY+ 
Sbjct: 15  LILFGSLMLLPFVTSSFRVALFGKYLSYSIAAVGIVLLWGYTGILSLGQAVFFGLGAYAL 74

Query: 82  VILGSRYGLSI-------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI-- 132
            +       +        W  +    ++      +     L      L    L       
Sbjct: 75  GMYLKLEASNFGLTDFMQWCGLEKLPLLWVPFKNVFIAILLGILIPALLAGALGYFTFKR 134

Query: 133 ----FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                   LI                 L      + +   F          ++++YY+ L
Sbjct: 135 SIKDVYFTLITQALAVIFVTLFIGQQPLTGGTNGLTNFKTFLGISLKDEKIKMWIYYLTL 194

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  +   +   + +    N    IRDN++    L    +  K++ +  S+    + G  
Sbjct: 195 AVVIVLYVVGKVIVK-KYGNILIAIRDNEERLKYLGINPLGYKITIYIFSAVLAAIGGML 253

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           F  +   ISP       +I ++  V +GG  +L      T +   +  +        +  
Sbjct: 254 FVLNVGMISPSEMGIIPSIELVLGVAIGGKVNLLGGIAGTVVAYFLKSIISENYPDIWLY 313

Query: 309 LLKFDCSFNMR 319
           LL         
Sbjct: 314 LLGVVFIMISL 324


>gi|332799565|ref|YP_004461064.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp.
           Re1]
 gi|332697300|gb|AEE91757.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter
           sp. Re1]
          Length = 297

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 93/305 (30%), Gaps = 22/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++        + AY        + L  WL + V
Sbjct: 10  LVNGISLGSLYALIAIGYTMVYGIVRLINFAHGDIIMLAAYFVFFGVGMFSLPWWLAVIV 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S  ++   G+++   + K   +   I+ LI +      L     +  G           F
Sbjct: 70  SIALTVLVGIVIEKAAYKPLREAPRISVLISAIGVSFFLENMGLVVFGGRAKAFYVPPIF 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G              S V        + +    L   ++  +  T    A R    +  
Sbjct: 130 KGV----------INISGVSITSLGIIIPIISAILLFGMVYIVNHTVTGMAMRACSKDMD 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + SA   + G  +A    +I   +      +      ++GG+
Sbjct: 180 TAKLMGIDVDAIISFTFGIGSALAAVGGIMWALKYPQI-HPLIGIMPGLKCFIAAVVGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++               L   +       L+ F    +        I L +++L +   
Sbjct: 239 GNIP-----------GAMLGGFLLGLGEILLVAFLPGLSGYRDAFAFIILIVILLFKPTG 287

Query: 339 LLRLR 343
           +L  +
Sbjct: 288 ILGEK 292


>gi|229826725|ref|ZP_04452794.1| hypothetical protein GCWU000182_02101 [Abiotrophia defectiva ATCC
           49176]
 gi|229789595|gb|EEP25709.1| hypothetical protein GCWU000182_02101 [Abiotrophia defectiva ATCC
           49176]
          Length = 291

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 95/306 (31%), Gaps = 26/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     + Y + A G S+V G L L++ +    YA GA   ++           ++  
Sbjct: 6   VFNGLALGMGYALIAVGYSLVFGILRLVNFSHGAIYAFGAEMAMVFIGMNFGIFPGILAA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAI-ATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             +      +I        R       A+LI +    NI+     I  G           
Sbjct: 66  MVLTGILGILIDKAALEPLRKKRSMPIASLITTIGISNIITNLLIIFLGSE--------- 116

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                 +SL          +   +    + +    L A+++  + +T I  A R    N 
Sbjct: 117 --KRNFKSLFGQTTIQIGQISISMTQIMMCVVSLLLMATLMFVVYKTKIGLAMRATEQNT 174

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           KA   +   + F     F ++     +AGA  +     + P+M  F   +   +  +LGG
Sbjct: 175 KAANLMGVNVNFVISFTFFLAGVSATIAGALVSGYYQIVYPNM-GFMAGLKAFAAAVLGG 233

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + SL        ++     +        +   + F     +                R H
Sbjct: 234 IGSLPGALLGGLVVGVSESMAATFLGSTYRDSIAFIILIIVLIV-------------RPH 280

Query: 338 SLLRLR 343
            L   +
Sbjct: 281 GLFGRK 286


>gi|29827733|ref|NP_822367.1| branched-chain amino acid ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
 gi|29604833|dbj|BAC68902.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
          Length = 369

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/342 (13%), Positives = 96/342 (28%), Gaps = 29/342 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
                    +    +       +   +  + L   M A G+ +  G  GLL+L   + + 
Sbjct: 16  AAAGFTGAAVALFAVAPLALSDFRLGLLAKYLCTAMVAVGICLAWGRGGLLTLGQGVFFG 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS----- 130
           +G Y+  +           +     +   A  +             LA   L+       
Sbjct: 76  LGGYAMAMHLKIVDAGPGTIPDFMQLYGTATELPWWWRPFANPVFALAATVLLPMAVAAV 135

Query: 131 ----------EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
                     +     ++           +            +  +  FF +     + +
Sbjct: 136 LGSFIFRRRVKGAYFAILSQALAAAFAIWLVGQQATTGGTNGLTDIQGFFGYDLDDPVNQ 195

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             +Y+V+     L  ++   L  +        +RD+++    L       KL A+ V++ 
Sbjct: 196 RMVYFVIAAALLLLIALARQLIHSRYGELLVAVRDSEERVRFLGYNPANVKLVAYVVAAG 255

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             G+AGA F  +   ISP +     +I ++    +GG  SL+        +         
Sbjct: 256 MAGLAGALFVPAVGIISPALIGIVPSIELVIGAAVGGRASLAGAVLGAIAVAWAKTALSE 315

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                          F    T    +   + +      L  L
Sbjct: 316 --------------EFPAAWTYFQGLLFIVALAFLPGGLASL 343


>gi|209694897|ref|YP_002262825.1| ribose ABC transporter permease protein [Aliivibrio salmonicida
           LFI1238]
 gi|208008848|emb|CAQ79055.1| ribose transport system permease protein RbsC [Aliivibrio
           salmonicida LFI1238]
          Length = 323

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 82/301 (27%), Gaps = 25/301 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
                  +   I ++  Q  +  + A G+++V+ + G + L+     A+   ++      
Sbjct: 37  FLNDNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLALCG-AFAATMIG 94

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             +   + +P S +     G I G+   K +                  L+    +    
Sbjct: 95  LEIHPIIAVPTSLLAGAILGAISGIIIAKGKVQAFIAT-----------LVTMTLLRGVT 143

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                   +    T V     +F    +  I       V++               T   
Sbjct: 144 MVYTEGRPISTGFTDVADSFSWFGTGYALGIPVPIWLMVIVFASVWYLL-----NHTRFG 198

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N+ A       +   K+  +A+      +AG    +      P        +
Sbjct: 199 RYVYALGGNESATRLSGINVDRVKIGVYAICGLLAALAGLIVTSRLSSAQPTA-GMGYEL 257

Query: 268 IVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             I+ V+LGG         +        I+  +      ++   +  ++       +   
Sbjct: 258 DAIAAVVLGGTSLAGGKGRIMGTLVGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAVL 317

Query: 322 T 322
            
Sbjct: 318 V 318


>gi|170749721|ref|YP_001755981.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
 gi|170656243|gb|ACB25298.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
          Length = 348

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 87/287 (30%), Gaps = 3/287 (1%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V    +         +  Y          +V  A GL ++ G  G LS      + +  Y
Sbjct: 22  VFAVAVAAAVAYPWFADGYTVGNTAYFFCWVFMALGLCLIWGYGGALSFGQTAFFGLSGY 81

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L    G +    +    +      ++  L         +    L +  +   + ++
Sbjct: 82  AYGVLTLNVGAAYGFTLAALVLAVALSAVMAALLGYFLFFGRIGGVFLGIITLSVTLALE 141

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                       +          +  +           +       +  G+  L   + L
Sbjct: 142 RFMAQTAGPEWKIGAARLNGYNGMSGMPPLTVPWFDGDLVLFPDVALYYGLLALLIVVYL 201

Query: 200 WLR---RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            LR        N    IR+N +    L   +   +L+AF + S   G++G  + A    I
Sbjct: 202 ALRILVNARFGNVLVAIRENPERAEMLGYDVRRYQLAAFVIGSGLAGLSGTLYTAWGQYI 261

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           +P     +   + +  V +GG   L+     T +++G  +       
Sbjct: 262 TPSSMGLTAAALPVIWVAVGGRGDLTATLIGTLLVLGGFQALTIYGS 308


>gi|163858811|ref|YP_001633109.1| putative branched-chain amino acid transport permease [Bordetella
           petrii DSM 12804]
 gi|163262539|emb|CAP44842.1| putative branched-chain amino acid transport permease [Bordetella
           petrii]
          Length = 290

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 97/307 (31%), Gaps = 28/307 (9%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             I +  +    Y + A GLS+++    +++       A+G Y          L  W  +
Sbjct: 7   FNIFNGLVIGAFYALMALGLSLIINLTNVINFAHGEFLALGGYIAY--TLDPYLGFWWAL 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            VS  I+   G+++    ++   +   + +L+++     +L        G  G+ +    
Sbjct: 65  IVSPFITAIIGLVVERVLIRPLYNRDPLYSLLLTFGLAYVLQDSIRFIWGAQGLPLQTPA 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   +L               +  +++  +    A +   L++T +    R    +
Sbjct: 125 VLNSPLSPTLFFLTG----------YRVFMVALVAVAVAVLFYVLKKTRVGMRIRAGTLD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +   +L   +   +   F +   F G+AG   A                      VI+G
Sbjct: 175 LEMVSALGVDVRILRNLNFGLGIFFAGLAGVLAAGMLGLTPTIGEGLIMPS--FVAVIVG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ SL        ++     +          +               + + + +V+L R 
Sbjct: 233 GLGSLVGTLFGGLVIGVAAGVVTVFYPSASEAS--------------IYVIMAIVLLFRP 278

Query: 337 HSLLRLR 343
           + L   +
Sbjct: 279 YGLFGEK 285


>gi|126737860|ref|ZP_01753590.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
 gi|126721253|gb|EBA17957.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
          Length = 440

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 97/275 (35%), Gaps = 21/275 (7%)

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
             + L  PV  +++     ++G  +L  R DYLAIATL ++EI   +L     ++ G   
Sbjct: 166 WPVILSWPVGGLLAAGAAWLIGKTALGLRSDYLAIATLGIAEIIIAVLKNEDWLSRGVKN 225

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF---------LSASIILW 200
           +    R       +++   F    +   +  +    + + + +             +   
Sbjct: 226 VVGLPRPLPFEVDLQNDPAFVDRAAGLGLDPVLASTLYVKLGYAILFAVVLLALLWMAQM 285

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             ++      R IRDN+ A  ++   +    L  F + SA  G+AGA       +++P  
Sbjct: 286 ALKSPWGRMMRAIRDNEVAAEAMGKDVTRRHLQIFVLGSAICGIAGAMMTTLDGQLTPGT 345

Query: 261 FKFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-------- 311
           +       ++  +VI+GG  +         ++  +      M+    + L          
Sbjct: 346 YNPLRFTFLIWVMVIVGGSGNNFGSVLGGFLIWFLWIKVEPMSLELISLLTSGMAEDSFL 405

Query: 312 ---FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                 +        M + L LV+      L+  +
Sbjct: 406 RGHLMENAAHMRLFTMGLILLLVLRFSPRGLIPEK 440



 Score = 38.7 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 34/99 (34%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +        +  ++    +  +   + S      +    LI  + A G+++  G  GL +
Sbjct: 5   MKHSLLFAAVGLLIVMEGVTDWGFFSGSWNSSLVILNMGLISAIMALGVNLQWGFAGLFN 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           +  +   A+G  + V+  +      W       +++   
Sbjct: 65  VGIMGFTALGGLAVVLTATPPTPGAWSAGGAGVVMAMVM 103


>gi|33599357|ref|NP_886917.1| branched-chain amino acid transport system permease [Bordetella
           bronchiseptica RB50]
 gi|33566953|emb|CAE30866.1| branched-chain amino acid transport system permease [Bordetella
           bronchiseptica RB50]
          Length = 314

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 49/302 (16%), Positives = 105/302 (34%), Gaps = 37/302 (12%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           S+ + + I V+       V   +G L+        +GAY   +   +      L +  SA
Sbjct: 31  SLVLWLAINVLITASFRFVT-LIGELNFAVAGFVGLGAYMAGVAAVQLEWPFLLTLAASA 89

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           + +G   ++ G  +L+ +G Y  + +   +E+ + I  K + +                 
Sbjct: 90  VFAGLVSLVFGYITLRAKGAYFMLISFAFTEVIRMIYTKTEAVGGSS------------- 136

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                         +    E +    ++ +      ++  L ++        IR+N    
Sbjct: 137 --------GMIGIFAPAYLEAYYPAFVIAVVLALLWVLWRLEKSDFGKVLVAIRNNDAIV 188

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++   +   K+    VSS   G+AGA  A + + ISP  F F   +  ++ + +GG + 
Sbjct: 189 ETVGINVHLTKVLCLGVSSFVAGIAGALLAYANNVISPGDFGFLLAVYALAYLKVGGESH 248

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +        +L  +                +F  SF          A+ + +L+    L+
Sbjct: 249 ILGAVVGAIVLTLL---------------GQFALSFGPYEHIFYGAAIVISVLLMPGGLI 293

Query: 341 RL 342
            L
Sbjct: 294 GL 295


>gi|262373786|ref|ZP_06067064.1| branched chain amino acid ABC transporter permease [Acinetobacter
           junii SH205]
 gi|262311539|gb|EEY92625.1| branched chain amino acid ABC transporter permease [Acinetobacter
           junii SH205]
          Length = 598

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/291 (9%), Positives = 88/291 (30%), Gaps = 17/291 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       IGAY+  ++ S +      L+    + +     ++       
Sbjct: 325 ITYGLLGVINMAHGELIMIGAYTTYVIQSFFKTHFAGLVDWYLLAAIPAAFLVSALIGML 384

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  +         + +      +  +  + +      +  +
Sbjct: 385 IER--TVIRPLYGRQLETLLATFGVSLILMQSVRMIFGAQNVEVSNVAWLSGGIALTPSL 442

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++     +   ++  L +T      R +  N++   ++        + AF +
Sbjct: 443 MLPYNRIAIIGFTVAVLLLLVFLLNKTRFGLFVRAVTQNRQMARAVGIRSARIDMMAFGL 502

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG   A   +        +  +  ++ +V                +      +
Sbjct: 503 GSGLAGLAGCALAQVGNVGPDLGQNYIIDAFLVVVVG--------------GVGQVWGAV 548

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
              +      ++L+      +    L+ + + L I  R   L  ++     
Sbjct: 549 LAALGLGISGTVLEIGLGAVLAKIILL-VLVILFIQKRPQGLFAIKGRFVE 598


>gi|212550589|ref|YP_002308906.1| urea/branched-chain amino acid ABC transporter permease [Candidatus
           Azobacteroides pseudotrichonymphae genomovar. CFP2]
 gi|212548827|dbj|BAG83495.1| ABC-type urea/branched-chain amino acid transporter permease
           component UrtB [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 301

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/303 (9%), Positives = 93/303 (30%), Gaps = 17/303 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++ A GLS++ G  G+++++      IG+Y+   +   +   +       A  
Sbjct: 12  LSLGSVLILEALGLSVIYGLAGIINMSHGEFVMIGSYTTYCIQQLFIAFLPPEWEGIAFF 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                  +         + L I  L    +   +      +   +    +   L  +   
Sbjct: 72  VSLPISFLSSALAGLVIERLIIRYLYSRPLESLLATWGISLILIQIARNIFGDL--ISIK 129

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             +++         +I      +++L    +   + +  ++T +    R++  N+     
Sbjct: 130 TPAILSGGFEIIKGLILPYNRLFIILVSIVVFILMYILFQKTRLGIQIRSVTQNRNISAC 189

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +  +     +  F + S   G+AG       + +      +   +    +V+ GG+  L 
Sbjct: 190 VGISTQRIDMITFMLGSGLAGIAGCAVTLIGNIVPNMGQTYI--VDSFLVVVTGGVGKLL 247

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +    ++        +                 +++ + + +  +       
Sbjct: 248 GCIVSGLGIGIFSKVFEIGFEAVYGK-------------VFILVLIIIYLQYKPEGFFSD 294

Query: 343 RTP 345
           ++ 
Sbjct: 295 KSR 297


>gi|312200549|ref|YP_004020610.1| inner-membrane translocator [Frankia sp. EuI1c]
 gi|311231885|gb|ADP84740.1| inner-membrane translocator [Frankia sp. EuI1c]
          Length = 310

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/310 (10%), Positives = 92/310 (29%), Gaps = 22/310 (7%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
               +   +Y + A G ++V G L L++      + +GA+   +  +R  + ++   P  
Sbjct: 12  IDGLMSGSLYAVIALGYTLVYGVLQLINFAHSEVFMLGAF-GGLFAARPIIHMFDHTPSG 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT------NGKAGIYVA 153
               G   + +   +         +  +    + +    +   +            +   
Sbjct: 71  MASVGIVMVGLIAGAASGALAAFVLERVAYRPLRKRNAPRLAYLISAIGASGFAVNMAGK 130

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
              +       +      F             ++    F+   +   + RT +  + R +
Sbjct: 131 LWGHQNVPLPPAFTNGVVFHIFTGKVNTQTLVIIAVAAFMLIVLDTLVARTRLGQSIRAV 190

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             +      +   +    +  F +  A  G  G   A +    +     F   +   +  
Sbjct: 191 AQDADTAIMMGVNVERVIVLTFVIGGALAGAGGFLQAMTFSAAN--NMGFLPGVKAFTAA 248

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ ++         L  +      +    +  ++ F             + L L+++
Sbjct: 249 VLGGIGNVRGAVLGGLTLGLIESYGGFIFQASYKDVIAF-------------LVLVLILM 295

Query: 334 MRSHSLLRLR 343
           +R   LL  R
Sbjct: 296 VRPTGLLGER 305


>gi|190894959|ref|YP_001985252.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700620|gb|ACE94702.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|327193243|gb|EGE60149.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CNPAF512]
          Length = 290

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 94/304 (30%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G++++ G L  ++      Y +G +         GLS    I V
Sbjct: 9   IINGIVTGSVYAIVAVGMTMIFGVLRAINFAHGEYYMLGTFGAWFAIDYLGLSYEASIVV 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +     ++G   ++        + ++ +     +L     +  G            
Sbjct: 69  GVLSTIVIAYVVGKFVMQRMVGAPPESGVLATLGIALVLQNTVILVFG------------ 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G    S                    +L+    +   + L +  T +  + R +  N +
Sbjct: 117 GGYKFFSGGYIEPVSILGFSLAEQRVIILIVCLIVFIGLELMVTYTRMGKSMRAVSQNVE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L  F + +A   ++G   A     +   M         + I+I+GG+
Sbjct: 177 CCEVVGIDVPQVVLRTFILGAALAALSGVLTAPVNVSVYGGM-GELITFKTLPIIIMGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++     A  IL     L        F   + F               L L+++ R H 
Sbjct: 236 GNVRGTFFAAMILGIAESLVATYVGLQFRDTVGFAT-------------LILMLMWRPHG 282

Query: 339 LLRL 342
           L   
Sbjct: 283 LFST 286


>gi|148377283|ref|YP_001256159.1| sugar ABC transporter permease [Mycoplasma agalactiae PG2]
 gi|148291329|emb|CAL58712.1| Sugar ABC transporter Permease [Mycoplasma agalactiae PG2]
          Length = 662

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/355 (12%), Positives = 109/355 (30%), Gaps = 22/355 (6%)

Query: 2   SIFSLRLNKYDKIL-CLLAVVYPLLLFLFLGATKSQKYIDSMGI------------QILI 48
           S  S R   Y+ I   +  +    ++ L    T   ++   +                +I
Sbjct: 31  SAVSTRRKAYNSIWSVVFGIFVSSIVLLVFFQTNPFEFFAQVFNATATKGNIDWVYIFII 90

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY-VILGSRYGLSIWLLIPVSAMISGACG 107
           Y + + G+       GL ++      ++       ++     +     I    ++     
Sbjct: 91  YSLASIGVGFSFK-TGLFNIGVAGQMSLSGVICLALINQSNVIESNGAIKNQGLVFLIML 149

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           + + +  L      L  A   + E+   IL+ W  +  G                  +  
Sbjct: 150 LSIVIGFLYAAIAGLCKAFFNIHEVVSTILLNWVAVYIGSFIFGSKSPFNNSFVFKNAST 209

Query: 168 RFFRFPSSFVIYEIFMYYV--LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                  S   ++   +++  ++ + F+S ++ +    T++    +    N+ A      
Sbjct: 210 GSAPINISGGFFDKSSFWIFGIVLVAFVSLTLYMIFAFTSLGYKIKMNGLNKDASSYAGV 269

Query: 226 TIIFAKLSAFAVSSAFIGMAGAF---FAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                 + +   S A  G+AG     F A +  +             I+I ++ G+ S  
Sbjct: 270 NQKLTTVLSMGFSGALAGLAGFIHFVFKAKQYDVITLSSPLPLGFDTIAISLI-GINSPI 328

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL-MRS 336
            I  ++     +      +  +Y  S +K      +    +   AL L+    R 
Sbjct: 329 GILFSSVFYTMLEFSRIELISFYSTSGVKEGGIDLVVGVIIFTTALALMFTNFRP 383


>gi|300864178|ref|ZP_07109066.1| permease protein of branched-chain amino acid ABC transporter
           [Oscillatoria sp. PCC 6506]
 gi|300337822|emb|CBN54212.1| permease protein of branched-chain amino acid ABC transporter
           [Oscillatoria sp. PCC 6506]
          Length = 308

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 95/299 (31%), Gaps = 14/299 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           + + +L+  M    L + +   G LSL     YA+G Y   IL +               
Sbjct: 11  LIVSMLLGAMLGLSLYLPL-MTGQLSLASPGFYALGGYIAAILSTTVFKQ---------- 59

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
                   +    L+     +    L +      + ++   +           R+  L  
Sbjct: 60  --TGNLFPLPFLLLEMLIAGIISGCLGIFVGVPALRLRGIYLAIATIAFVEILRVLSLNL 117

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            +                 I   +V + +  +S +++  L R  +  A+  IR ++    
Sbjct: 118 DITGGAVGIFGIPQPFGTPIEYLWVAVPLLLVSMALLYRLERIRVGRAFAAIRADELVAD 177

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           ++     F K+ AF + +   G+ GA  A   +  +     F  +II ++ V++GG  + 
Sbjct: 178 AIGINPTFYKVLAFTLGAILAGVVGAVSAHFLNTWNARQGTFDASIIYLTSVLIGGNRTF 237

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                   +   + E+   +        +            +  + + L  +     L+
Sbjct: 238 LGPVLGGMVFTALPEVLRALA-ATAGLPIWLAQFLRDGRLIIFGLLIVLGTIFFPQGLV 295


>gi|300704062|ref|YP_003745664.1| ABC branched-chain amino acid transporter membrane component (livh)
           [Ralstonia solanacearum CFBP2957]
 gi|299071725|emb|CBJ43049.1| putative ABC-type branched-chain amino acid transporter, membrane
           component (livH) [Ralstonia solanacearum CFBP2957]
          Length = 315

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 49/321 (15%), Positives = 110/321 (34%), Gaps = 27/321 (8%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
            + +     L+  M + GL+++   +G+L+      Y +GAY   ++        W  + 
Sbjct: 7   NLLNGVSYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYVISVHL--GFWAALI 64

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            + ++ GA G ++    L+    Y  +A L+ +     ++ +   +  G         L 
Sbjct: 65  AAPLLVGALGALVERFGLRTVHRYGHVAELLFTFGLAYLIEEGVKLVWG---------LP 115

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   V   +    F      +  +  +++L    +   I L L RT I    +    + 
Sbjct: 116 AVPYRVPEALDGPLFTLFTSSFPKYRAFMMLVSLLMLVGIFLLLTRTRIGLVIQAALTHP 175

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +L   +    +  F    A  G+AG         ++      +   IV  + ++GG
Sbjct: 176 DMVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NAFVTEPSMAAAVGSIVFVVAVVGG 233

Query: 278 MTSLSKIAKATAILIGVVEL--------------CCGMNFYYFNSLLKFDCSFNMRHTTL 323
           M SL     A+ ++  +                    +       +  ++ +       L
Sbjct: 234 MGSLVGAFVASLLIGCIQTFAVTLDLSVASLLGKLGVVLNPDVPLISVWNLTIAQVAPVL 293

Query: 324 MVIALFLVILMRSHSLLRLRT 344
             + L L+++ R   L+  R 
Sbjct: 294 PYLLLVLMLIFRPRGLMGTRE 314


>gi|33591819|ref|NP_879463.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella pertussis Tohama I]
 gi|33603670|ref|NP_891230.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella bronchiseptica RB50]
 gi|33571462|emb|CAE44947.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella pertussis Tohama I]
 gi|33577795|emb|CAE35060.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella bronchiseptica RB50]
 gi|332381236|gb|AEE66083.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella pertussis CS]
          Length = 294

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 92/306 (30%), Gaps = 23/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I S      +Y +   GL++   +  +L+         GA    ++          +   
Sbjct: 8   IVSGLSVGAVYALIGLGLNLTFWTTRVLNFGQGSVLMAGAMLTAVMVGAGVNVFLAVGVS 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    ++  +     R    ++  ++ +      L        G   +   D L+ 
Sbjct: 68  LLVTAFILWIVELVGVRPMRRMSGSMGWVVSTLGIGIFLQGMASWLFGTQAVAFPDVLFS 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              TV                 +    V +    +   + L+LR +      R +  ++ 
Sbjct: 128 SADTV---------EFMGAYISLQYIAVFVISVMIVCLMELFLRHSIWGYGVRAVAHDRD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    + +F VS    G+AG   +     + P+ F     I+     ++GGM
Sbjct: 179 LAALMGIPVYRVVVFSFLVSGVLAGIAGILVSQVSGTVDPN-FGLHLLILAFVAAVVGGM 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         IL  + +L  G        ++ F             + L  V+ +R   
Sbjct: 238 GSAFGSLVGGLILGIMEKLVGGYVSPAAAEVVAF-------------VLLIGVLTIRPQG 284

Query: 339 LLRLRT 344
           L   R 
Sbjct: 285 LFGKRE 290


>gi|90418667|ref|ZP_01226578.1| possible permease component, ABC-type branched-chain amino acid
           transporter [Aurantimonas manganoxydans SI85-9A1]
 gi|90336747|gb|EAS50452.1| possible permease component, ABC-type branched-chain amino acid
           transporter [Aurantimonas manganoxydans SI85-9A1]
          Length = 298

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 88/302 (29%), Gaps = 19/302 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I    I      + A GL++V G L +L+      YA+GAYS  +    +       +P 
Sbjct: 8   ILDGLIYASWLFIVALGLTLVFGVLRILNFAHGGLYALGAYSAAVAVPFFASW---GLPP 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +       + +  +        +  L        IL+    +               
Sbjct: 65  AFSLIAMFIAALAVAIVIAPLIERGLLRLFYGRDEVLILLVTYAVFLILEDATKMVFGVD 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             + Y  +   ++         + L L RT I      + +  +
Sbjct: 125 PYYVFEPRNLLGNVEVGSLFYVGYDLALIGLAIVCGLGVWLGLHRTRIGKVTVAVINEPE 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              ++   I    L AF +      + GAF +             S  ++  ++VI+GG+
Sbjct: 185 VSAAMGVNIARIYLLAFGLGVFLAALGGAFTSPLISV--QPGISVSVIVVSFAVVIIGGL 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A    I+                               ++ + + +V++ R   
Sbjct: 243 GSIPGAAIGALIVGLARSFAV--------------YEAPEAEIFIIYLVMVIVLIFRPEG 288

Query: 339 LL 340
           L 
Sbjct: 289 LF 290


>gi|77464569|ref|YP_354073.1| ABC sugar transporter, inner membrane subunit [Rhodobacter
           sphaeroides 2.4.1]
 gi|126463409|ref|YP_001044523.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
 gi|77388987|gb|ABA80172.1| ABC sugar transporter, inner membrane subunit [Rhodobacter
           sphaeroides 2.4.1]
 gi|126105073|gb|ABN77751.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
          Length = 363

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/313 (13%), Positives = 86/313 (27%), Gaps = 11/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L V   +   L      S   +  +  Q+ I  +     ++VV + G + L+     
Sbjct: 48  LIVLVVSISIFGALLGQKFFSAFTLTLILQQVAIVGIVGAAQTLVVLTAG-IDLSVGAIM 106

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +        RYG+   L +          G + G    + +     +   +   +  
Sbjct: 107 VLSSVIMGQFTFRYGIPAPLSVLCGLAAGAGIGFVNGTLVARMKLPPFIVTLGMWQIVLA 166

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +     T     I     +            F               Y  + +  L 
Sbjct: 167 ANFLYSANETIRSQDISAQAPILQFFGN-----TFRLGADEAGRGGAVFTYGAVLLILLV 221

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I   LR+TA       + D+  A            ++ + +S     +AG        
Sbjct: 222 LVIAYVLRQTAWGRHVYAVGDDPDAAELAGVQTRNVLVTVYTLSGLICALAGWVMIGRLG 281

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   +F+    + ++VI      GG  S+  +     I+         M      + 
Sbjct: 282 SVSPTAGQFANIESITAVVIGGISLFGGRGSVLGMLFGALIVGVFSLGLKLMGTDPQWTY 341

Query: 310 LKFDCSFNMRHTT 322
           L            
Sbjct: 342 LLIGILIIAAVAV 354


>gi|167588737|ref|ZP_02381125.1| inner-membrane translocator [Burkholderia ubonensis Bu]
          Length = 345

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/326 (10%), Positives = 98/326 (30%), Gaps = 18/326 (5%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           + F     +   +     ++      +          + ++     +  + A   + V+ 
Sbjct: 25  ARFFNPAARQRLLAFASLLLLIAFFSVASPNFLEVDNLVTILQATAVNGVLAVACTYVII 84

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           + G + L+        A    ++ + +G+ + + I  +       G + G+   K +   
Sbjct: 85  TSG-IDLSVGTLMTFCAVMTGVVLTYWGMPLPVGIVAALGFGALSGCVSGIVIAKMKVPP 143

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                           +    +  G + +    R  +   T   +          ++  +
Sbjct: 144 FIAT------------LGMMMLLKGLSLVISGTRPIYFNDTPGFMSIAQDSLIGSLVPAL 191

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +   +L +  ++    + L +T        +  N++A       +   K+  +  S A 
Sbjct: 192 PIPNAVLILFLVATGASVVLNKTIFGRYAFALGSNEEALRLSGVKVDAWKIGVYTFSGAV 251

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+AG   A+  +   P + +  E   + ++VI      GG  S+        I+  +  
Sbjct: 252 CGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSILGTIIGAFIMSVLTN 311

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               M+       +       +    
Sbjct: 312 GLRIMSVAQEWQTVVTGVIIILAVYL 337


>gi|149203222|ref|ZP_01880192.1| Branched-chain amino acid ABC-type transport system, permease
           component [Roseovarius sp. TM1035]
 gi|149143055|gb|EDM31094.1| Branched-chain amino acid ABC-type transport system, permease
           component [Roseovarius sp. TM1035]
          Length = 289

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 97/299 (32%), Gaps = 26/299 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                I +M A GL+I+ G++G+++L       +GAY+   L S  G SI + +P   + 
Sbjct: 12  LSMASILLMIALGLAIIYGAMGVINLAHGEFVMLGAYAAWALQSYAGFSIIVALPFVFIA 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
             A G I+    ++          L    I   +    +     ++       +    T 
Sbjct: 72  VAAVGWIIEKVIVQRLYHRPLDTILATWGIGIILQQLVRLSVGAESRFVKGPEILSGNTQ 131

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                         +I   +  +V++    + A+    + +T      R +  N+K    
Sbjct: 132 -----------IGGLIMSNYRLFVIVFSLSVLAASWALMTKTEFGMKLRAVIQNRKISEC 180

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA  +   G+AGA        I          +    +VI+GG+ SL 
Sbjct: 181 YGIEAKNIYSFTFAYGAGLAGIAGALITPLFSTIPTMGTGLV--VDAFLVVIVGGLGSLL 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             A A+ ++     L   +                      ++  + ++I  R   L  
Sbjct: 239 GAATASVLIGEATALFSMLFNDTLGR-------------IAVLAGIIVLIRFRPRGLFP 284


>gi|146342706|ref|YP_001207754.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. ORS278]
 gi|146195512|emb|CAL79537.1| Putative branched-chain amino acid ABC transporter, permease
           protein [Bradyrhizobium sp. ORS278]
          Length = 297

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 100/295 (33%), Gaps = 16/295 (5%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G++G++++       +GAY  V+ G   G +I++ IP++ +++   G+++ 
Sbjct: 18  VALGLAITYGAMGVINMAHGEMVMVGAYVTVLSGLWLGTNIFVAIPLAFIVTALLGLLIE 77

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
              ++     L    L    I   I    +              L      V        
Sbjct: 78  RVVVRKLYGRLLDTLLATWGIAILIQQAVRLEFGLSFLGIHIQGLGPGLQNVSVPDILQG 137

Query: 172 -FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
            F  +      +  +++L    L+ +    + RT      R I  N K   +    +   
Sbjct: 138 TFRFAGSDINRYRAFIILITAILAIATWFVIYRTVAGTQVRAIIRNPKMAAACGIDVTRV 197

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
               FA  S   G+AG   +  +          S  +    +V++GG+ SL     +  I
Sbjct: 198 NALTFAFGSGLAGVAGVMMSGFKTV--FPDMGTSMVVDGFLVVVMGGVGSLLGSVLSAGI 255

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           L  +  L            + F               +  +I+++   L  L+  
Sbjct: 256 LGEINGLVAAATNDILARAVVFG-------------VVIAIIVLKPKGLFALKGR 297


>gi|330468455|ref|YP_004406198.1| branched-chain amino acid ABC transporter permease [Verrucosispora
           maris AB-18-032]
 gi|328811426|gb|AEB45598.1| branched-chain amino acid ABC transporter permease protein
           [Verrucosispora maris AB-18-032]
          Length = 386

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/332 (13%), Positives = 94/332 (28%), Gaps = 29/332 (8%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L   +       +  S+  + L   M A G+ +  G  G+L+L   + + +G Y+  +  
Sbjct: 42  LLFAVAPLVLSDFRLSLLAKYLCVAMVAVGIGLAWGRGGMLALGQGVFFGLGGYAMAMHL 101

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS--------------- 130
                    +     +      + +           L    L+                 
Sbjct: 102 KLADAGPGNMPDFMLLYGQLDELPLWWRPFASPWFALPATVLLPMAVAFVLGSLVFRRRV 161

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                 ++           +            +  +  FF +     + +  +Y+++ G 
Sbjct: 162 RGAYFAILSQALAAAMVILLIGQQGTTGGTNGLTDIQGFFGYDLDDPVNQRMVYFIIAGT 221

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 +   L +         +RD ++    L       KL A+ V++   G+AGA F 
Sbjct: 222 LLALLVLARHLMQCRYGELLVAVRDGEERVRFLGYDPAAVKLVAYVVAAGMAGLAGALFV 281

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            +   ISP +     +I  +  V +GG  +L         +                   
Sbjct: 282 PAVGIISPALIGIVPSIEFVIGVAVGGRATLLGPVLGAVAVAWARTALSE---------- 331

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                F    T L  +   +V+      L  L
Sbjct: 332 ----RFPGGWTYLQGLLFVVVVAFLPGGLASL 359


>gi|207723556|ref|YP_002253955.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|207743086|ref|YP_002259478.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|206588757|emb|CAQ35720.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206594483|emb|CAQ61410.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 315

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 49/321 (15%), Positives = 110/321 (34%), Gaps = 27/321 (8%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
            + +     L+  M + GL+++   +G+L+      Y +GAY   ++        W  + 
Sbjct: 7   NLLNGVSYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYVISVHL--GFWSALI 64

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            + ++ GA G ++    L+    Y  +A L+ +     ++ +   +  G         L 
Sbjct: 65  AAPLLVGALGALVERFGLRTVHRYGHVAELLFTFGLAYLIEEGVKLVWG---------LP 115

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   V   +    F      +  +  +++L    +   I L L RT I    +    + 
Sbjct: 116 AVPYRVPEALDGPLFTLFTSSFPKYRAFMMLVSLLMLVGIFLLLTRTRIGLVIQAALTHP 175

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +L   +    +  F    A  G+AG         ++      +   IV  + ++GG
Sbjct: 176 DMVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NAFVTEPSMAAAVGSIVFVVAVVGG 233

Query: 278 MTSLSKIAKATAILIGVVEL--------------CCGMNFYYFNSLLKFDCSFNMRHTTL 323
           M SL     A+ ++  +                    +       +  ++ +       L
Sbjct: 234 MGSLVGAFIASLLIGCIQTFAVTLDLSVASLLGKLGVVLNPDVPLISVWNLTIAQVAPVL 293

Query: 324 MVIALFLVILMRSHSLLRLRT 344
             + L L+++ R   L+  R 
Sbjct: 294 PYLLLVLMLIFRPRGLMGTRE 314


>gi|149914807|ref|ZP_01903337.1| branched-chain amino acid ABC transporter permease [Roseobacter sp.
           AzwK-3b]
 gi|149811600|gb|EDM71435.1| branched-chain amino acid ABC transporter permease [Roseobacter sp.
           AzwK-3b]
          Length = 288

 Score = 67.6 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 56/303 (18%), Positives = 106/303 (34%), Gaps = 27/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +YV+ A GL+ V G LG+           G Y    L   +GL +   I V
Sbjct: 11  IINGMAIGGVYVLIALGLTTVFGILGIAHFAHGSVSMFGGYLTFFLVVMWGLPLLAAILV 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G+++ L + +   +   I   I++     ++        G            
Sbjct: 71  ALIVGLILGVLIELLAYRPVRNASHINAFIVALGLTMMVEGLNLEFFG------------ 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V        F    V       YV++    L A++ +++ +T    A R + +N+ 
Sbjct: 119 HEQVVIPTDFNRVFSIGGVTIPELRLYVIVAAALLIAAMTIFVEKTKTGQAIRAVAENRD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    L  F++S+A    AG    A                   +++ILGG+
Sbjct: 179 AAILMGVNVNTIPLVVFSISTALGVCAGVMVGALFAIAPGIGEGLVVKG--FAVLILGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L     L  G     +  ++ F             +A+ LV+L+R   
Sbjct: 237 GSIPGAVVGGLVLGITEALAAGFISSAYKDVIAF-------------VAMILVLLVRPQG 283

Query: 339 LLR 341
           L+ 
Sbjct: 284 LMG 286


>gi|149203026|ref|ZP_01879997.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. TM1035]
 gi|149143572|gb|EDM31608.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. TM1035]
          Length = 308

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 91/307 (29%), Gaps = 21/307 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   +  + A GLS+V G + ++++     + +GA     +         +   ++ + 
Sbjct: 15  AVTAAVLALTAVGLSLVFGVMRVVNIAHGEFFMLGAVLAWWIAQSVVGHPAIGFALALVA 74

Query: 103 SGACGMIMGLPSLKF---RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           +      + + +      R +Y    T++ +     I+ +   +  G     V       
Sbjct: 75  APLIVGALAVAADMTILKRLEYDPERTIVATIGLLYIIQQVTLMGYGPDARPVEAPFNTR 134

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI---ILWLRRTAISNAWRTIRDN 216
                       +   +        Y L  +      +      + RT I    R  + +
Sbjct: 135 IALPWFEHGAEGWAMIWPWGLGTTTYKLAVIGAAVVLLCAVWALMTRTRIGLVMRATQAD 194

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +    +    +       F + +A   +AG      +      +      ++   +VI+G
Sbjct: 195 RDMALAFGIPVERVYALVFGLGAALAALAGVLIVPIQQA--HYLMGADPLLLSFIVVIIG 252

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ SL     A  ++     +                         L  + + LV++ R 
Sbjct: 253 GLGSLPGTVLAAVLIGLSDGIISVFFSPTLAK-------------ILATLLVGLVLVFRP 299

Query: 337 HSLLRLR 343
             L   R
Sbjct: 300 QGLFGGR 306


>gi|27381062|ref|NP_772591.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354228|dbj|BAC51216.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 342

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 112/290 (38%), Gaps = 15/290 (5%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V   L+ L  G     +Y+  +   IL   +FA  L +++G  G++SL     + +GAY+
Sbjct: 22  VAFWLIVLACGFAFPTRYL--IMTDILRLALFAMSLDLILGYAGIVSLGHAAFFGVGAYA 79

Query: 81  YVILGSRYG-LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
             +L          L + ++ + +   G       ++       + TL ++ + + +  +
Sbjct: 80  AGLLALHGIVNEPVLALILAGLAAMVLGFATSFLVIRGVDLTRLMVTLGIALLLEALAER 139

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           +  IT G  G+   +     G     +     F  S            L + F+      
Sbjct: 140 FSNITGGTDGLQGIEMQPIFGEIPFDMFGKAGFFYS------------LAVLFVLFLFAR 187

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +    + R I++N     ++   +    ++ + +++ + G+AGA F  +    S D
Sbjct: 188 RVVHSPFGLSLRAIKNNPLRAAAIGIPVNRRLIAIYTLAAFYAGIAGALFTQTTAIASLD 247

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           +F F  +  ++ ++++GG   L        +   + EL   +   Y+   
Sbjct: 248 VFAFERSADLMLVLVIGGTGYLYGGLVGAVVFRMLQELFSTITPQYWQFW 297


>gi|116626853|ref|YP_829009.1| inner-membrane translocator [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116230015|gb|ABJ88724.1| inner-membrane translocator [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 682

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/304 (10%), Positives = 78/304 (25%), Gaps = 25/304 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLG-ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           RL    +    LA+   L +F  +G    +      +    +   + A  ++ ++   G 
Sbjct: 16  RLFPNGEWALGLALAVELAIFATIGENFFTLANFFEVVRLSVELGLLALAMTPIM-ITGG 74

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+      + A  +  L    G SI      + ++    G++  +   +     L + 
Sbjct: 75  IDLSVGSTMGLAAVVFGALWRDGGCSIAGAAGAAILLGCLAGLLNAMLITRLNIPPLIVT 134

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L           G     R     +                +  +    
Sbjct: 135 -----------LGSLSLFRGIAEG---ITRGSVNYSGFPQSFLNLGQGYLGGVVPVQFSI 180

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +++ +      +     R+ I      I  +                  + +S     +A
Sbjct: 181 LVIAILGYWVLLH----RSVIGRTIYAIGFSPGGARYAGIPAQRRVALLYFLSGLVASVA 236

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCG 300
              + A   +   D     E   + ++V     + GG  ++         +  +      
Sbjct: 237 AIIYVAHLGQAKSDAGTGYELAAITAVVLGGTSVFGGRGTVWGTVLGLFAISVLQNGLRL 296

Query: 301 MNFY 304
               
Sbjct: 297 ATLP 300


>gi|296135256|ref|YP_003642498.1| inner-membrane translocator [Thiomonas intermedia K12]
 gi|295795378|gb|ADG30168.1| inner-membrane translocator [Thiomonas intermedia K12]
          Length = 295

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 49/298 (16%), Positives = 102/298 (34%), Gaps = 26/298 (8%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           +    Y M + GL+++ G + +++      + +GA    + G    L+ W ++  + ++ 
Sbjct: 21  VNGAFYAMLSLGLAVIFGLMDVVNFAHGAFFMMGAMFTWMGGQYLHLNFWWMLLFAPLLV 80

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
           G  G+ +   +L+       I  L+++     ++        G AG           T  
Sbjct: 81  GLFGIGVERVALRRLRGIDPIYGLLLTFGLTLLIEGVFRSFFGVAGAPYNPPEPLSAT-- 138

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                       F+    +  + ++    +     L + RT +    R   +N     + 
Sbjct: 139 --------LNLGFMYLPAYYLFAVVASLLVCFGTWLLIDRTKLGAYLRAGTENPALIQAF 190

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
                   +  F   SA  G+AG   A         +   +  I+V +IV++GGM S+  
Sbjct: 191 GVNFPRMVMLTFGFGSALAGLAGVLAAPVIQV--SPLMGSNLIIVVFAIVVIGGMGSVLG 248

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              +   L  +  L         N+              ++ I + LV+ MR   L  
Sbjct: 249 AIVSGLALGLIEGLAKVFYSPVSNT--------------VVFILMALVLTMRPAGLFG 292


>gi|331697658|ref|YP_004333897.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326952347|gb|AEA26044.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 335

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 82/312 (26%), Gaps = 18/312 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI---- 92
                      IY + A G ++V G L L++      + +GAY+   + S  G       
Sbjct: 29  SNTIDGLAYGSIYALVAMGYTMVYGVLQLINFAHSEVFIVGAYAVFFVLSALGFGPSAPN 88

Query: 93  --WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                +    +++    M++                   +      LI     +      
Sbjct: 89  LSVAALVGDLVLAMLVAMLVSGLVAVALERVAYRPLRRRNAPRLAFLITAIGASFAIQYA 148

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
             A R       V        F       +     +      L     +++ RT +    
Sbjct: 149 LFAWRGANPEPAVIMFRPKPVFEIFGATIDSQQLVIFGAAIVLMIITDMFVNRTRLGRGL 208

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +  +      +        +  F +     G A  F+             F   I   
Sbjct: 209 RAVAQDPDTATLMGVNKERVIVLTFLIGGILAGAAALFYVMKVPAGVQFNGGFILGIKAF 268

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ ++               L  G+      +  +           +  + L  
Sbjct: 269 AAAVLGGIGNIR------------GALLGGLLLGVIGNYGQTLLGNAQWTDVVAFVVLVG 316

Query: 331 VILMRSHSLLRL 342
           ++++R   +L  
Sbjct: 317 ILMIRPTGILGE 328


>gi|306844631|ref|ZP_07477218.1| ribose ABC transporter permease [Brucella sp. BO1]
 gi|306275075|gb|EFM56838.1| ribose ABC transporter permease [Brucella sp. BO1]
          Length = 334

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 94/314 (29%), Gaps = 20/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++   +L        +   I ++ +Q  I  + A G++ V+     + L+     
Sbjct: 27  IFIAFLLLATILSFSNEYFLTAGNISNVLLQTSINGILAIGMTFVI-LTRGIDLSVGSVV 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+         +   ++     P S  I+   G+++G+      G  ++   +       
Sbjct: 86  ALAGIVSASFATTSAMAGIAGAPYSPFIAIGVGLLVGIGCGALVGTIVSRFAVPAFVATL 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +L   + +T    G      L      + +               + +   ++ +  + 
Sbjct: 146 GMLSAARGLTLIYGGGKPVPALVPDFRWIGT------------GNILGVPVPVILLAIVF 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L R+        +  N  A  +    I   + S + +S    G+AG   +A   
Sbjct: 194 LVSWWILNRSRFGRYIYAVGGNPHAANTSGINISRVRFSVYVISGGLAGLAGMILSARTG 253

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                    S  +  I+ V++      GG+  ++       I+  +      M    +  
Sbjct: 254 SA-LPQAGISYELDAIAAVVIGGTSLSGGIGRITGTLIGALIIGVMNNGLDLMGIQSYYQ 312

Query: 309 LLKFDCSFNMRHTT 322
            +            
Sbjct: 313 QVLKGALIVGAVML 326


>gi|147676794|ref|YP_001211009.1| branched-chain amino acid ABC-type transport system, permease
           components [Pelotomaculum thermopropionicum SI]
 gi|146272891|dbj|BAF58640.1| branched-chain amino acid ABC-type transport system, permease
           components [Pelotomaculum thermopropionicum SI]
          Length = 291

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 77/267 (28%), Gaps = 10/267 (3%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   +Y + A G+++++G + +++L       +G Y   +    +G+  ++ + ++  +
Sbjct: 12  ILLGGMYALIAIGMTLIMGVMKIINLAHGALVMVGMYVTYVCFKEFGIDPYIGMFLAMPV 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G             Y+    + +  I     +                       +
Sbjct: 72  LFFIGC--------LIQKYMINRLVEVDSILPENQVLLTVGIMLVLTESARLIFKSDYRS 123

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           V +           +   + M          +  + L+L +T I  + R    ++ A   
Sbjct: 124 VATSYSSKVAFLGDMSISVPMLTGFFIAMIFTLILHLFLTKTDIGRSIRATAQDRDAAVY 183

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +        +  F + SA     G+                        I ILGGM S  
Sbjct: 184 MGVNSSRITMITFGIGSALAAAGGSLLLPLFYL--FPDIGHLFTAKSFIITILGGMGSTM 241

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSL 309
             A    +L     L        +  +
Sbjct: 242 GAAVGGLVLGIAESLGATYISMGYKDI 268


>gi|114768852|ref|ZP_01446478.1| ABC branched-chain amino acid transporter family, inner membrane
           subunit [alpha proteobacterium HTCC2255]
 gi|114549769|gb|EAU52650.1| ABC branched-chain amino acid transporter family, inner membrane
           subunit [alpha proteobacterium HTCC2255]
          Length = 434

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 51/274 (18%), Positives = 98/274 (35%), Gaps = 21/274 (7%)

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            I +  P+  + +G    ++G  +L  R DYLAIATL +SEI   +L     +T G   +
Sbjct: 160 PIVISWPIGGLFAGIAAWVIGKITLGLRSDYLAIATLGISEIIIAVLKHEDWMTRGVKNV 219

Query: 151 YVADRLYFLGTTVRSLIRF---------FRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               R       +++   F              S +  +I    + + M  +   +    
Sbjct: 220 IGMPRPVPYEVNLQTTEWFLDMSNWFGTDPVGFSSIFVKICYAGLFIVMLLIVLWLSETA 279

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            ++      R IRDN+ +  ++   +    L  F + S  +G+AGA       +++P  +
Sbjct: 280 LKSPWGRMMRAIRDNEVSANAMGKNVTKRHLQVFVLGSVVVGIAGAMLTTLDGQLTPTSY 339

Query: 262 KFS-ENIIVISIVILGGMTSLSKIAKATAILI-----------GVVELCCGMNFYYFNSL 309
           +      ++  +VI+GG  +         ++             ++ +            
Sbjct: 340 QPLRFTFLIWIMVIVGGSGNNWGAILGGFVIWFFWIEAEPLGLLLMNVITSGMSEDSGLR 399

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
           L    S        M I L LV+      LL  +
Sbjct: 400 LHLINSAAHMRLMTMGIILLLVLRFSPRGLLPEK 433



 Score = 39.1 bits (89), Expect = 0.96,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 33/77 (42%)

Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
          +L      LL L +G  +S     S+    LI  + A G++I  G  GL ++  +   A+
Sbjct: 7  ILYFTIMALLLLGVGLFQSWNVSLSILNLCLISAIMALGVNIQWGYAGLFNVGIMGFAAL 66

Query: 77 GAYSYVILGSRYGLSIW 93
          G  + V++        W
Sbjct: 67 GGLAAVLVAMPPIEGAW 83


>gi|291460086|ref|ZP_06599476.1| ribose ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291417427|gb|EFE91146.1| ribose ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 336

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 82/313 (26%), Gaps = 22/313 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               ++    L +       +  + S+  Q     + + G+ + + + G + L+      
Sbjct: 15  FAALIILCAALSIASPNFLDKTNLMSILKQTSFNALLSTGMLLTLITAG-IDLSVGATAT 73

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            GA     +      +  +L      +SG  G+I GL   +    +  ++TL M  +   
Sbjct: 74  FGACVAGAMVRLGVHNPIVLFFSVLAVSGTIGLINGLLLTRLHLPHPFVSTLGMKNVLWG 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             +                       +  +                      L + F+  
Sbjct: 134 AALIITASQ---------------MISFSNTGAEGIMLLGSATILGGFPISFLVVLFIYI 178

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + + L RTA+  +      N +A               + +S    G AG         
Sbjct: 179 LMHILLTRTALGRSIYCAGGNMEATRLSGIHAENVLTFCYIMSGLMAGFAGIVSIGRSGI 238

Query: 256 ISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +        +   I+  I+GG        ++        I+  +      ++       
Sbjct: 239 CNGANAIQPYDTDAIAACIIGGASFMGGKGTMVGTMLGALIIAVLRNGFTLLSVPSAWQN 298

Query: 310 LKFDCSFNMRHTT 322
           L            
Sbjct: 299 LVLGLVIIGAVLL 311


>gi|163736464|ref|ZP_02143883.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis BS107]
 gi|163743291|ref|ZP_02150672.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161383479|gb|EDQ07867.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161390334|gb|EDQ14684.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis BS107]
          Length = 336

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/312 (8%), Positives = 79/312 (25%), Gaps = 19/312 (6%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW---------LLIPVS 99
             + A G++++   L   +       A G    +++   +              L +P+ 
Sbjct: 25  LALGALGVTLIYSVLRFSNFAHGDTMAFGTMITILVTWWFQSMGISFGPLPTALLALPIG 84

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                   +I      +F     A   + +      + +    +                
Sbjct: 85  IAGCMLLMLITDRTVYRFYRAQKAKPVIFVMVSLGVMFMMNGLVRFIIGPGDQRFADGER 144

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                   +        +  +      ++    + A +  +L +T    + R   DN+  
Sbjct: 145 FIISARDFKALTGLREGLAIKTTQGITVITAVVVVALLFWFLNKTRTGKSMRAYSDNEDL 204

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                       +  + + +    +AG  +   +         F   + + +  I+GG+ 
Sbjct: 205 ALLSGINPERVVMYTWLIVATLATIAGVLYGLDKSF--KPFTYFQLLLPIFAAAIVGGLG 262

Query: 280 SLSKIAKATAILIGVVE--------LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           S         I+             +   +                     +    L +V
Sbjct: 263 SPVGAIAGGFIIAFSEVTITYAWKKVLTYVVPETMKPDGLVQLLSTDYKFAVSFAILVVV 322

Query: 332 ILMRSHSLLRLR 343
           +L +   L + +
Sbjct: 323 LLFKPTGLFKGK 334


>gi|332559462|ref|ZP_08413784.1| inner-membrane translocator [Rhodobacter sphaeroides WS8N]
 gi|332277174|gb|EGJ22489.1| inner-membrane translocator [Rhodobacter sphaeroides WS8N]
          Length = 363

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/313 (13%), Positives = 86/313 (27%), Gaps = 11/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L V   +   L      S   +  +  Q+ I  +     ++VV + G + L+     
Sbjct: 48  LIVLVVSISIFGALLGQKFFSAFTLTLILQQVAIVGIVGAAQTLVVLTAG-IDLSVGAIM 106

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +        RYG+   L +          G + G    + +     +   +   +  
Sbjct: 107 VLSSVIMGQFTFRYGIPAPLSVLCGLAAGAGIGFVNGTLVARMKLPPFIVTLGMWQIVLA 166

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +     T     I     +            F               Y  + +  L 
Sbjct: 167 ANFLYSANETIRSQDISAQAPILQFFGN-----TFRLGADEAGRGGAVFTYGAVLLILLV 221

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I   LR+TA       + D+  A            ++ + +S     +AG        
Sbjct: 222 LVIAYVLRQTAWGRHVYAVGDDPDAAELAGVQTRNVLVTVYTLSGLICALAGWVMIGRLG 281

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   +F+    + ++VI      GG  S+  +     I+         M      + 
Sbjct: 282 SVSPTAGQFANIESITAVVIGGISLFGGRGSVLGMLFGALIVGVFSLGLKLMGTDPQWTY 341

Query: 310 LKFDCSFNMRHTT 322
           L            
Sbjct: 342 LLIGILIIAAVAV 354


>gi|328886343|emb|CCA59582.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Streptomyces venezuelae ATCC 10712]
          Length = 296

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 81/307 (26%), Gaps = 21/307 (6%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           ++ +      IY + A G  ++  +  +++         G Y   +      +  W  + 
Sbjct: 7   FLINGISLGSIYALIALGFVVIFRATEVVNFAHASLLLAGGYVTAV--LHDEIGFWPALL 64

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
                +   G  +    ++           I++     +L        G           
Sbjct: 65  AGVAGAAVVGAAVEFLVMRRHRGSDHSVLAIVTIGVDILLATELTRRIGTD--------- 115

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                +             V         LL    L  + +L  R T+   A R   +NQ
Sbjct: 116 --ILALGDPWGDAVVTVGGVTIAETRIAALLAAALLITAFLLAFRYTSWGVAMRAAAENQ 173

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +    +   +    L A+AV+     +A  F          +       +      ILGG
Sbjct: 174 ETAALMGIRLGRVSLGAWAVAGGLAAVAALFLTV-FPTPGLERATSLAALKAFPAAILGG 232

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S +       ++     L  G                         + +  V+L+R  
Sbjct: 233 LDSTTGALVGGLLVGVTESLATGYQGDLAFLGRGIGDLAP-------YLVMVAVLLIRPA 285

Query: 338 SLLRLRT 344
            L   + 
Sbjct: 286 GLFGTKE 292


>gi|305664134|ref|YP_003860422.1| inner-membrane translocator [Ignisphaera aggregans DSM 17230]
 gi|304378703|gb|ADM28542.1| inner-membrane translocator [Ignisphaera aggregans DSM 17230]
          Length = 357

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 109/333 (32%), Gaps = 21/333 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-------YGLS 91
           + ++G+   I ++ A  ++I VG   +     +IA  +GA +   + SR       +   
Sbjct: 10  LLNIGLNFGIGLILALSINIEVGFANIPQFGRLIAALMGAIAAGGIASRIVAAILGFPYG 69

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM------------SEIFQNILIK 139
           +  +   S +++     +   P L      L +A                S   +   + 
Sbjct: 70  VEYISNNSYIVTHINMELSKNPLLSLIYLLLTLAIAAFLGGIIGYASAYPSLRLREAYLG 129

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              ++ G+    +A     +      ++    F    V        V+L    +   I  
Sbjct: 130 ITLLSIGEILRGIAYNYSPIVGGSVGIMVPDPFRFLGVYRYTGAVIVILIFAAIVFFISE 189

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP- 258
            + R+ +    + +RD++ A       I+  +  A  +  +   +AGA    S   I   
Sbjct: 190 RIARSPMGRTMKAVRDSELAAQVYGIDIVKIRTYALIIGGSIAAIAGALRVLSDAYIGVG 249

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            M ++    +  + ++LGG+ +   +     I      L           +L      + 
Sbjct: 250 GMQRYEWTFLPWAYIMLGGVGNNLGVVLGVLIFSTARSLIMVYKTNLVQ-ILPPYIDVSN 308

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                + + + L+ + R   +L  +       +
Sbjct: 309 LEYIFVGLTIILITMFRPRGILPEKPTLALSRK 341


>gi|294852942|ref|ZP_06793615.1| ribose transport system permease [Brucella sp. NVSL 07-0026]
 gi|294821531|gb|EFG38530.1| ribose transport system permease [Brucella sp. NVSL 07-0026]
          Length = 334

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/314 (11%), Positives = 93/314 (29%), Gaps = 20/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++   +L        +   I ++ +Q  I  + A G++ V+     + L+     
Sbjct: 27  IFIAFLLLATILSFSNEYFLTAGNISNVLLQTSINGILAIGMTFVI-LTRGIDLSVGSVV 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+         +   ++       S  I+   G+++G+      G  ++   +       
Sbjct: 86  ALAGIVSASFATTSAMAGIAGALYSPFIAICVGLLVGIGCGALVGTIVSRFAVPAFVATL 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +L   + +T    G      L      + +               + +   ++ +  + 
Sbjct: 146 GMLSAARGLTLIYGGGKPVPALVPDFRWIGT------------GNILGVPVPVILLAIVF 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L R+        +  N  A  +    I   + S + +S    G+AG   +A   
Sbjct: 194 LVSWWILNRSRFGRYIYAVGGNPHAANTSGINISRVRFSVYVISGGLAGLAGMILSARTG 253

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                    S  +  I+ V++      GG+  ++       I+  +      M    +  
Sbjct: 254 SA-LPQAGISYELDAIAAVVIGGTSLSGGIGRITGTLIGALIIGVMNNGLDLMGIQSYYQ 312

Query: 309 LLKFDCSFNMRHTT 322
            +            
Sbjct: 313 QVLKGALIVGAVML 326


>gi|119896413|ref|YP_931626.1| putative branched-chain amino acid transport permease [Azoarcus sp.
           BH72]
 gi|119668826|emb|CAL92739.1| putative branched-chain amino acid transport permease [Azoarcus sp.
           BH72]
          Length = 318

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 57/335 (17%), Positives = 124/335 (37%), Gaps = 36/335 (10%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            ++   +L     +  L+    +  T          ++IL + +FA   ++++G  GLLS
Sbjct: 9   FDRATPVLFGALFIIGLVAPFAVYPTF--------LMKILCFGLFACAFNLLLGFAGLLS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                      Y   +L    G++  + I    + +G  G + G+ +++  G Y A+ TL
Sbjct: 61  FGHAAFLGSAGYVCGMLVRDLGVTPEVGIIGGTLAAGVLGWVFGVLAIRRSGIYFAMITL 120

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +S++     ++WK                     ++ + R   F    +   + MYY++
Sbjct: 121 ALSQMVFFFALQWKATGG--------------EDGLQGVPRGHLFGLIDLSNNLAMYYLV 166

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +      II     +      + IR+N+    SL   +   KL AF +S+A  G+AGA
Sbjct: 167 FAVFCAGFFIIYRAIHSPFGQILKAIRENEPRAISLGYDVSKYKLLAFVLSAALAGLAGA 226

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
                    S     +  +  V+ + +LGG+ ++       ++++ +          +  
Sbjct: 227 TKTLVFQLASLTDVHWHMSGEVVLMTLLGGLGTILGPLVGASVIVSLQSELADKVGSWVT 286

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                          +M +   L +L+    ++  
Sbjct: 287 --------------VIMGVIFVLCVLLFRRGIVGE 307


>gi|85706819|ref|ZP_01037910.1| inner-membrane translocator [Roseovarius sp. 217]
 gi|85668612|gb|EAQ23482.1| inner-membrane translocator [Roseovarius sp. 217]
          Length = 306

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 108/305 (35%), Gaps = 15/305 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     ++  + A GL+++ G +GL++L     Y IGA++            W+     
Sbjct: 11  LNGLQFGVMLFLMAAGLTLIFGVMGLINLAHGSLYMIGAFAAA----------WVAGLTG 60

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           + +      +          + L I  L   +    +L  +  I     G   A   + L
Sbjct: 61  SFLLALAASLAAAAVAGVLIELLVIRRLYDRDHLDQVLATFALILILSEGTRWAFGSFPL 120

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                  +         + Y  +   ++     ++A++   + +T +    R   ++++ 
Sbjct: 121 YLDTPDWLSGTLRLPFGIDYSRYRLAMIGAGLVIAAALFAMISKTRLGIRIRAGENDREM 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+ 
Sbjct: 181 IAALGVNISALYTLVFALGAALAGLAGALIGAIQSV--QVGMGEPVLILAFVVIVIGGIG 238

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM---RHTTLMVIALFLVILMRS 336
           S+        ++     L   +   +F + ++   + ++     +  + I +  V++ R 
Sbjct: 239 SIKGAFVGALLVGLTDTLGRALLPTFFATFMEPAAANSVGASLASMAIYILMAGVLIFRP 298

Query: 337 HSLLR 341
             L  
Sbjct: 299 RGLFG 303


>gi|291319952|ref|YP_003515210.1| sugar ABC transporter permease [Mycoplasma agalactiae]
 gi|290752281|emb|CBH40252.1| Sugar ABC transporter Permease [Mycoplasma agalactiae]
          Length = 662

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/355 (12%), Positives = 112/355 (31%), Gaps = 22/355 (6%)

Query: 2   SIFSLRLNKYDKIL-CLLAVVYPLLLFLFLGATKSQKYIDSMGI------------QILI 48
           S  S R   Y+ I   +  +    ++ L    T   ++   +                +I
Sbjct: 31  SAVSTRRKAYNSIWSVVFGIFVSSIVLLVFFQTNPFEFFAQVFNATATKGNIDWVYIFII 90

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           Y + + G+       GL ++      ++     + L ++  +     +  +  +     +
Sbjct: 91  YSLASIGVGFSFK-TGLFNIGVAGQMSLSGVICLALINQSNVIESNGVIKNQGLVFLIML 149

Query: 109 IMGLPSLKFRGDY-LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +  +    +     L  A   + E+   IL+ W  +  G                  +  
Sbjct: 150 LSIVIGFLYAAIAGLCKAFFNIHEVVSTILLNWVAVYIGSFIFGSKSPFNNSFVFKNAST 209

Query: 168 RFFRFPSSFVIYEIFMYYV--LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                  S   ++   +++  ++ + F+S ++ +    T++    +    N+ A      
Sbjct: 210 GSAPINISGGFFDKSSFWIFGIVLVAFVSLTLYMIFAFTSLGYKIKMNGLNKDASSYAGV 269

Query: 226 TIIFAKLSAFAVSSAFIGMAGAF---FAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                 + +  +S A  G+AG     F A +  +             I+I ++ G+ S  
Sbjct: 270 NQKLTTVLSMGLSGALAGLAGFIHFVFKAKQYDVITLSSPLPLGFDTIAISLI-GINSPI 328

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL-MRS 336
            I  ++     +      +  +Y  S +K      +    +   AL L+    R 
Sbjct: 329 GILFSSVFYTMLEFSRIELISFYSTSGVKEGGIDLVVGVIIFTSALALMFTNFRP 383


>gi|260461098|ref|ZP_05809347.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259033132|gb|EEW34394.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 293

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 86/300 (28%), Gaps = 24/300 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   +  + A GLS+V G + ++++     + +GA     + +  G    L    + +I
Sbjct: 15  LVTSAVLALTALGLSLVFGVMRVVNVAHGEFFMLGAVLAWAISTAVGSHPALGFLAALVI 74

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +      + L + +     L             +L   + +     G             
Sbjct: 75  APLIVGAIALIAERLVLRRLNYNPEATIVATIGMLYIIQQLALTFYGPEARPVEPPFN-- 132

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                   R    +  Y  +   V+     L  +  L L RT      R  + + +   +
Sbjct: 133 -------HRILLPWFGYSGYKLSVVAASALLLIATWLVLTRTKAGLVMRATQYDSETAQA 185

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
               +       FA+ +    +A              +      ++   +VI+GG+ SL 
Sbjct: 186 FGIPVGRVYGGVFALGAMLAAIAAVLIVPISQA--HYLMGQDPLLLSFIVVIIGGLGSLR 243

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A  ++     +                         +  + + +V++ R   L   
Sbjct: 244 GTVVAAVLIGMSDGIISMFFSPTLAK-------------IIATLLVAMVLVFRPQGLFGT 290


>gi|237654020|ref|YP_002890334.1| inner-membrane translocator [Thauera sp. MZ1T]
 gi|237625267|gb|ACR01957.1| inner-membrane translocator [Thauera sp. MZ1T]
          Length = 309

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 99/310 (31%), Gaps = 18/310 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-----YGLSIW 93
           +    +  ++Y + A G  ++  + G+ +        + A +             G S++
Sbjct: 8   MLGGLMTGMLYSLVALGFVLIFKASGVFNFAQGAMVLVAALAMARFSEWSNAALGGDSLF 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L   +  + +GA   ++     +F    L         +    +                
Sbjct: 68  LANVIGIVGAGAVMFVVAWAVERFVLRKLVNQEGATLLMVTLGIAYVLEGLGQTFFGSEI 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             +         +I F       V+     +        L A + ++ ++TAI  A R +
Sbjct: 128 YSIDVGMPK-DPVIMFEGLFEGGVLINKEDFIAAALAAVLVAGLTVFFQKTAIGRALRAV 186

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            D+ +A  S+   +    +  + V+     +AG  + +            +  +  + +V
Sbjct: 187 ADDHQAAQSVGIPLNKTWVIVWCVAGLVALVAGIIWGSKMGV---QFSLVTVALRALPVV 243

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ILGG+TS+        I+    +L       Y    ++   +          +   +V+L
Sbjct: 244 ILGGLTSVPGAIVGGLIIGVGEKLSEVYLGPYVGGGIEIWFA---------YVMALIVLL 294

Query: 334 MRSHSLLRLR 343
            R   L   +
Sbjct: 295 FRPQGLFGEK 304


>gi|119718661|ref|YP_925626.1| inner-membrane translocator [Nocardioides sp. JS614]
 gi|119539322|gb|ABL83939.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Nocardioides sp. JS614]
          Length = 294

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 97/296 (32%), Gaps = 26/296 (8%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           +Y + A GL+++ G + ++++       + ++    L   +G+   L I ++  I  A G
Sbjct: 17  VYALAASGLTLIFGVMRVINIAHGAFLILASFITYWLWDAFGIDPLLAIVITTPIVFALG 76

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
            +     +         +T++++     ++        G     V               
Sbjct: 77  WVTYKVVVSPIRTAPMASTVLLTFGLALVVEGAMGEIWGNNSTAVRP-----------SY 125

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
               F    +       Y  L    +   +   L +T +  A R    N  +   +   +
Sbjct: 126 ADESFIFGGLFLPKAQVYGGLIAVVVLVLLWGVLTKTWLGRAIRAAATNPSSAELVGIKV 185

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
                  FA+  A  G  GA        +    +++     +++IV+LGG+ SL+     
Sbjct: 186 SAVAALVFALGIAAAGAGGAITGVLYPFVPGSHYQWI--ARLLAIVVLGGLGSLNGAVLG 243

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
             I      L        + + +                 +FLV+L+R   LL  R
Sbjct: 244 ALIFGIAETLTAAYVSPSWATAVP-------------YAIVFLVLLIRPQGLLGTR 286


>gi|254558161|ref|YP_003065686.1| putative high-affinity branched-chain amino acid transporter,
           membrane component of ABC transporter (livH-like)
           [Methylobacterium extorquens DM4]
 gi|254265704|emb|CAX17054.1| putative high-affinity branched-chain amino acid transporter,
           membrane component of ABC transporter (livH-like)
           [Methylobacterium extorquens DM4]
          Length = 298

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 100/290 (34%), Gaps = 19/290 (6%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+++ G + +L++     YAIGAY    L   +  S    +   ++       ++ 
Sbjct: 21  IAVGLTLIYGVMKILNMAHGTFYAIGAYLGATLLGLWFSSGLPSL--GSLAMIPVAALVA 78

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
             ++    +   +      +    +L+ +      + GI +   +     +    +    
Sbjct: 79  GLAVGVAVERGVLRIFAGRDPVVLLLVTYALFLILEDGIKLIWGVDPYVVSEPMWL-LGT 137

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                ++Y  +    +     +   +  +L+ T+     R +  +++   ++   +   K
Sbjct: 138 VRIGPLVYPAYNLLTVAAAILVGVGLTWFLQFTSRGKILRAVIHDEEVSHAMGIPVSRWK 197

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           LSAF V +    + GA  A +   +          +++ ++V++GG+ S+        I+
Sbjct: 198 LSAFVVGTGLAALGGALTAPTVSVV--PAMGVEVIVMMFAVVVIGGLGSIPGTVVGALIV 255

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             V                     +       +   + LV+ +R   L  
Sbjct: 256 GLVRSAAVHY--------------WPEVELFSIYAVMALVLAVRPKGLFS 291


>gi|269928785|ref|YP_003321106.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
 gi|269788142|gb|ACZ40284.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
          Length = 296

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 93/305 (30%), Gaps = 22/305 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ S      +Y + A GL IV G L L++        +G YS +ILG      I++  
Sbjct: 6   QFVVSSLSLGGLYALMALGLVIVYGILRLINFAYGELVMVGGYSLLILGKTVWPWIFVAA 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             S  ++    ++M     +   +      LI S     +L     +T            
Sbjct: 66  L-SVAMAVLASVLMERVGFRPVRNASPTTMLITSFAISALLQNIALLTVSP--------- 115

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                  +      L     L   + ++LRRT +  A R   D+
Sbjct: 116 -RPQAVRLPGFFVQTLTIGGFRVKAVDLISLAVSLILLGVLTVFLRRTIMGMALRASADD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 L          AFA+S    G+   F+      +          +I     ++G
Sbjct: 175 FTMARLLGVRANGVIAVAFAISGFMAGIVSLFWVGRSSLVE-PAVGLQPVLIAFIASVVG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM SL        +L  +      +             S       +    + +++L+R 
Sbjct: 234 GMESLKGAVLGGYLLGFLTVGLQSV----------LPQSLLDYRQAVTFSIVIVLLLIRP 283

Query: 337 HSLLR 341
             L+ 
Sbjct: 284 QGLIG 288


>gi|291287779|ref|YP_003504595.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809]
 gi|290884939|gb|ADD68639.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809]
          Length = 287

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 96/308 (31%), Gaps = 26/308 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ S      IY + A G +I+  + G+++        IG          YGL   +  
Sbjct: 2   QFLYSGLTSGSIYGLVALGFNIIYNTTGIINFAQGEFVMIGGMLIYTFFVMYGLPFPIAF 61

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +   +   G++     ++       +  + ++     IL        G+  + V + +
Sbjct: 62  FGAVACAFLIGIVFERFFIRLTKIKNELNLITVTIAASIILRDVAMHLWGRDSLPVKEFI 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +              +       V+     ++  + ++L+++    A R   D+
Sbjct: 122 PVFNIDMPG-----------GVISSQSILVVAVSLMVALGLNIFLKKSRYGKAMRASFDD 170

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             A  +    +   ++ +FAV++    +AG   A                +   S  ILG
Sbjct: 171 PVAAETCGIKVSNIRVMSFAVAALLGAVAGVIIAPIMFV--TYDDGIMTGLKGFSAAILG 228

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +         +L         +        + F             + + +++ ++ 
Sbjct: 229 GLGNFGAAIAGGLLLGIFESFSASIIPSGLKDAVAF-------------LVILVILFVKP 275

Query: 337 HSLLRLRT 344
             L   + 
Sbjct: 276 DGLFGRKK 283


>gi|326315519|ref|YP_004233191.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323372355|gb|ADX44624.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 309

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 94/305 (30%), Gaps = 16/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y + A G  ++  + G+ +          A +           +     + A +
Sbjct: 12  LMAGMLYALVALGFVLIFKASGVFNFAQGAMVLFAALAMARFAEWLPRWLGFDSLLLANV 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
              C  +  +  + +  + LA+  L+  E    ++              +          
Sbjct: 72  LAFCAAVACMVGVAWLVERLALRHLVNQEPIALLMATLGITYFLDGAGQLIFGSSTYKID 131

Query: 163 V----RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           V      +I         ++      Y  +    L A + L+ ++T    A R + D+ +
Sbjct: 132 VGMPKDPMIVLENVFEGGLLLSREDLYAAVVAAALVALLSLFFQKTRTGRALRAVADDHQ 191

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +    +  ++V      +AG  + +               +    +VILGG+
Sbjct: 192 AAQSIGIPLSRIWVIVWSVGGIVALVAGIIWGSKLGVQFSIS---LVALKAFPVVILGGL 248

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        ++    ++       +    ++   +          +     +L+R   
Sbjct: 249 TSVPGAIVGGLLIGVGEKVSEIYLGPFLGGGIENWFA---------YVLALGFLLIRPQG 299

Query: 339 LLRLR 343
           L   +
Sbjct: 300 LFGDK 304


>gi|126737859|ref|ZP_01753589.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
 gi|126721252|gb|EBA17956.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
          Length = 336

 Score = 67.2 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/312 (9%), Positives = 83/312 (26%), Gaps = 19/312 (6%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW---------LLIPVS 99
             + A G++++   L   +       A G    +++   +              L +P  
Sbjct: 25  LALGALGVTLIYSILRFSNFAHGDTMAFGTMMTILVTWLFQSWGIGFGVLPTALLALPFG 84

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + + A  ++      +F  +  A   + +      + +    +                
Sbjct: 85  ILATMALVLVTDRTVYRFYREQKAKPVVFVMVSLGVMFMMNGLVRFIIGPGDQRFSDGER 144

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                   +     +  +  +      ++    + A +  +L +T    + R   DN+  
Sbjct: 145 FLIKARAFKKMTGLNEGLAIKTTQGITVVTAIVVVALLFWFLNKTRTGKSMRAYSDNEDL 204

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                       +  + + +A   +AG  +   +         F   + + +  I+GG+ 
Sbjct: 205 ALLSGINPERVVMYTWLIVAALATIAGVLYGLDKSF--KPFTYFQLLLPIFASAIVGGLG 262

Query: 280 SLSKIAKATAILIGVVE--------LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           S         I+             +                         +    L +V
Sbjct: 263 SPQGAIAGGFIIAFSEVTITYAWKKVLNYSLPESLAPDGLVQLLSTDYKFAVSFAILIVV 322

Query: 332 ILMRSHSLLRLR 343
           +L +   L + +
Sbjct: 323 LLFKPTGLFKGK 334


>gi|89067915|ref|ZP_01155359.1| ABC sugar transporter, inner membrane subunit [Oceanicola
           granulosus HTCC2516]
 gi|89046513|gb|EAR52569.1| ABC sugar transporter, inner membrane subunit [Oceanicola
           granulosus HTCC2516]
          Length = 336

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 94/312 (30%), Gaps = 20/312 (6%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +     +   ++  +          I ++     +  + A  +++++   G + L+    
Sbjct: 27  LAFASLIALVIVFSIASPNFFQVSNIMAILQAASVNGVLAIAVTLII-ITGGIDLSIGTL 85

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
               A    ++ +  G  + L +  +       G+  G    K +               
Sbjct: 86  MTFCAVMTGVVLTWLGAPLILGVVTAIATGMLSGLASGTFVAKMKIPPFIAT-------- 137

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
               +    I  G + I    R  +   T    +         VI    +   +L +  +
Sbjct: 138 ----LGMMLILKGLSLIVTGTRPIYFNDTPGFDLISRGSLIGAVIPGFPVPNGVLILFIV 193

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  +   L RT +      +  N++A           K++ +AVS A +G+AG   A+  
Sbjct: 194 AGVVAWILSRTVLGRYTFALGSNEEAVRLSGVNADAWKMAIYAVSGAIVGIAGLLIASRL 253

Query: 254 DRISPDMFKFSENIIVISIVILGG------MTSLSKIAKATAILIGVVELCCGMNFYYFN 307
           +            +  I+ V++GG        ++        I+  +      ++     
Sbjct: 254 NSAQ-PALGLGYELEAIAAVVIGGTSLSGGRGTILGTLIGALIMAVLTNGLRVLSVAPEW 312

Query: 308 SLLKFDCSFNMR 319
             +       + 
Sbjct: 313 QTVVTGAIIIVA 324


>gi|330831655|ref|YP_004394607.1| branched-chain amino acid ABC transporter permease [Aeromonas
           veronii B565]
 gi|328806791|gb|AEB51990.1| ABC-type branched-chain amino acid transporter, permease protein
           [Aeromonas veronii B565]
          Length = 308

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 86/305 (28%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +       +
Sbjct: 12  LLNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMVMAGLMMMGIDSTFL 71

Query: 99  SAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
               +    +I+                      I     I           +    R  
Sbjct: 72  LLGGAFLVSIIITGTYGWSIERVAYRPLRGGNRLIPLISAIGMSIFLQNMMRMAQGSRDI 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            + + +                      + +       ++  ++ R+ +  A R   ++ 
Sbjct: 132 AMPSLISGGWTLGGEDGFQASLSYMQLIIFVVTFITMLALTQFIGRSRMGRACRACSEDI 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMANLLGIDTHVVISITFVLGAALAAVAGVLLGMYYGVINPY-LGFMAGLKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+        +L  V  L  G     +  ++ F               L  V+L    
Sbjct: 251 IGSIPGAVLGGLLLGVVEALTAGYLSTEYKDVMAF-------------ALLIFVLLFMPT 297

Query: 338 SLLRL 342
            +L  
Sbjct: 298 GILGR 302


>gi|152998184|ref|YP_001343019.1| monosaccharide-transporting ATPase [Marinomonas sp. MWYL1]
 gi|150839108|gb|ABR73084.1| Monosaccharide-transporting ATPase [Marinomonas sp. MWYL1]
          Length = 360

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 80/309 (25%), Gaps = 18/309 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +L +       +  G       +  +  Q+ I  +     ++++ + G + L+      
Sbjct: 53  IVLILAIIGFSMIVGGRFLHPFNLSLILQQVTIIGVIGVAQTLIILTAG-IDLSVGAIMV 111

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     +   YG   WL + +   +    G I GL   + +           +  F  
Sbjct: 112 LASVVMGRMAMDYGFEAWLALLIGIGVGAVAGFINGLLITRMKLPPFIATLGSWNVFFAL 171

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L   K  T     I  A  L                  +  ++   + Y  L M  +  
Sbjct: 172 NLWYSKSETIRSQDINAAAPL------------LQWLGETINVFGARLTYGSLLMLAIFF 219

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I   L  T          D+  A            LS + ++     +           
Sbjct: 220 VIWYALNWTPWGRHVYATGDDPAAAKLAGIRTDRILLSVYILAGVVCAIGAWVLIGRIGS 279

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           ISP     +    + ++VI      GG  S+        ++                   
Sbjct: 280 ISPQAGYTTNLDSITAVVIGGCSLFGGRGSIYGTLIGALVVGVFRNGLALAGVDVLWQEF 339

Query: 311 KFDCSFNMR 319
                  + 
Sbjct: 340 TVGILIIVA 348


>gi|148260071|ref|YP_001234198.1| monosaccharide-transporting ATPase [Acidiphilium cryptum JF-5]
 gi|326402976|ref|YP_004283057.1| ribose ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|146401752|gb|ABQ30279.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Acidiphilium cryptum JF-5]
 gi|325049837|dbj|BAJ80175.1| ribose ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 365

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 96/311 (30%), Gaps = 9/311 (2%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +  +V   L      A  +   I ++ +Q  I  + A G++ V+   G + L+      +
Sbjct: 37  VALIVIMALFAFLSPAFLTWSNIITVLVQSSINGLLAIGMTFVI-VSGGIDLSVGSIAGL 95

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                  L        +L + +      A  + +   +L    +   I  + ++     +
Sbjct: 96  CGMIVGALIDVGLPVPFLGVVIYPHAWAAVAIALAAGALIGAINGFVITRMKVAPFIATL 155

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            + +            +   +  G        F    +  +++     ++L+    ++  
Sbjct: 156 GMLYIARGIALLSNNGSTFPFLDGHKALGNRGFPWLGNGLLLHIPVPIWLLVIASVVATG 215

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           I     RT        I  N++A       ++  +   + +S     +AG   AA  D  
Sbjct: 216 IA---ERTKFGRHVYAIGGNERAAALSGVRVLAVRARVYVISGVLAALAGIVIAAQLDSA 272

Query: 257 SPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                   E   + + V     ++GG  ++        ++  +V+    +    F  ++ 
Sbjct: 273 GAAAGTGYELNAIAAAVLGGTSLMGGKGTIGGSVIGALVIAVLVDGLILLGVSDFWQMII 332

Query: 312 FDCSFNMRHTT 322
                 +    
Sbjct: 333 TGFVIVLAVAI 343


>gi|120556770|ref|YP_961121.1| inner-membrane translocator [Marinobacter aquaeolei VT8]
 gi|120326619|gb|ABM20934.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Marinobacter aquaeolei VT8]
          Length = 308

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 96/301 (31%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                ++V+ A GL+I+ G +G++++       +GAY+  ++   +   +  L      +
Sbjct: 22  LSLFSVFVLMALGLAIIFGQMGVINMAHGEFMILGAYTTYLVSGFFQSVLPGLFGGYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     ++      F      +   +       +L  W      +           +G  
Sbjct: 82  AIIIAFLICAALGAFIEWA--MIRHLYRRPLDTLLATWGLSLIMQQTYRSIFGAREVGVE 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +      +  V   I   +V++    ++  + L + R+      R +  N+    +
Sbjct: 140 LPEWMMGAIQVTDLVELPINGLFVMIIALSIALGVYLLMYRSGWGKKVRAVVQNRPMAEA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           FA+     G+AGA F       +      +  +    +V+ GG  SL 
Sbjct: 200 VGINSAGVDRMTFALGCGIAGIAGAAFTMIGS--TGPSSGQAYIVDTFLVVVFGGAQSLI 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++ +  ++++R   L+ L
Sbjct: 258 GTIVSAFGISQAQSTMEFFLSGSMAK-------------VLTLLVVVGILMLRPEGLMAL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|256255907|ref|ZP_05461443.1| hypothetical protein Babob9C_00776 [Brucella abortus bv. 9 str.
           C68]
          Length = 287

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 110/303 (36%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y M + GL+I+ G L +++      Y +GA+   +L S  G+S W  + +
Sbjct: 8   LLVGLINGSFYAMLSLGLAIIFGLLRIINFAHGAQYMLGAFVGYLLLSWLGISYWPALVL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I G  G I+   +L    +   +  L+ +     ++        G AG   A     
Sbjct: 68  APLIVGLGGAIIERVALSRLYNLDPLYGLLFTFGLALVIEGTFRYYYGAAGQPYAVPPSL 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G               F+    +  +V++   F+     L + +T +    R   +N  
Sbjct: 128 AG----------GRNLGFMFLPNYRAWVVVASLFVCLGTWLLIEKTKLGAYLRAATENPT 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +A+ SA  G+AG   A         +   +  I+V ++V++GGM
Sbjct: 178 LVKAFGINVPLLLTFTYALGSALAGLAGIMAAPIYQV--SPLMGSNIIIVVFAVVVVGGM 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L     L                  +    + ++ + + +V+L+R   
Sbjct: 236 GSILGAIITGYVLGIAEGLTKVF--------------YPEASSIVVFVIMAIVLLVRPAG 281

Query: 339 LLR 341
           L  
Sbjct: 282 LFG 284


>gi|160879282|ref|YP_001558250.1| monosaccharide-transporting ATPase [Clostridium phytofermentans
           ISDg]
 gi|160427948|gb|ABX41511.1| Monosaccharide-transporting ATPase [Clostridium phytofermentans
           ISDg]
          Length = 359

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 95/309 (30%), Gaps = 19/309 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +LA+++ +   L      S   + ++  QI+ Y +   GL+  +   G   L+   + A
Sbjct: 36  FVLALLFMIFAILKPDQFLSANNMQNLLQQIVTYTIIGCGLTFCL-VCGGNDLSAGASMA 94

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +     V++  +    +W+ I V   +    G++ G                        
Sbjct: 95  LSGIIVVLMLKQGVP-LWIGILVCLTMGILTGIMNGFFIEILGVIPFVAT---------- 143

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             +  + +  G A   V     +  +     ++   +      +   + Y ++     + 
Sbjct: 144 --LGTQWVYRGLANAIVNGAPVYTTSIPSQKVQDQFYKLGGGRFPGGLSYSVVIALVYAI 201

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + + L +T I         N +A       ++  ++ A+ +S     + G    +    
Sbjct: 202 ILGVVLAKTRIGRQIYACGSNLEAAKLSGINVVRTRMFAYCISGLSAAICGILVTSRLSS 261

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + V     I GG   +        ++  +      +    F  ++
Sbjct: 262 AQPTAGTGYEMEAIAAAVLGGISIAGGEGVILNTVIGALMMGIIRNGLNLIKVNSFWQMV 321

Query: 311 KFDCSFNMR 319
                  + 
Sbjct: 322 IIGLILVLA 330


>gi|317401549|gb|EFV82178.1| inner-membrane translocator [Achromobacter xylosoxidans C54]
          Length = 336

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 43/298 (14%), Positives = 95/298 (31%), Gaps = 18/298 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               +I  + A G+++V G + +L+    +  AIGAY    +                + 
Sbjct: 48  LAMGMIIFIVASGMTLVFGLMDVLNFGHGLFIAIGAYMAATVLGAMSDWTQSGSLWLNLA 107

Query: 103 SGACGMIMGLPSLKFRGDYLAIATL--IMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +    MI+G+      G       +  +  +  + ILI    +  G+  I +      L 
Sbjct: 108 AVLPAMIVGMLVAGAVGVAFERVIVRPVYGQHLKQILITMGGMIIGEEIIKMLWGPQTLS 167

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             +   +R           E F    L+    +   ++  L RT +    R   ++++  
Sbjct: 168 LPLPDALRG-ALLVGDAAIEKFRLVALVVGVAVLGGMLWLLNRTKLGLLIRAGVEDREMV 226

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            SL   I    +  F   S   G+ G  +   +  I         N+++  ++++GG+ S
Sbjct: 227 ESLGYRIRHLFVGVFVAGSMLAGLGGVLWGLYQQSI-VPQLGAQVNVLIFIVIMIGGLGS 285

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                    ++  +      +                       +  +  ++L R   
Sbjct: 286 TVGCLIGALLVGLMANYTGFL--------------MPKAALFSNIALMVAILLWRPQG 329


>gi|212704230|ref|ZP_03312358.1| hypothetical protein DESPIG_02285 [Desulfovibrio piger ATCC 29098]
 gi|212672310|gb|EEB32793.1| hypothetical protein DESPIG_02285 [Desulfovibrio piger ATCC 29098]
          Length = 293

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 91/312 (29%), Gaps = 26/312 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
            T + + + +      IY + A G+ ++  +  +++        + A+  V + + + L 
Sbjct: 3   WTINIQLLFTGLAMGSIYALIALGIVLIYRAADIVNFAQGELVMLPAFVAVYMLNSWELP 62

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            +++ P+  +  G  G +    +     +   +  +I +      L        G   + 
Sbjct: 63  AYVVYPLVILFMGGVGYVFEKVAYYPLRNRSFLPVIISTIGVSIFLKNSAQYAFGALPLV 122

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           +                   F    ++ +     +++    L  +   +  RT +    +
Sbjct: 123 MPRP-----------TDVDLFVIGDIVIDPQYIIIIVTTAILLVAQHFFFERTMLGKMMQ 171

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
               +++A   +   I       F  S+    +AG                    +    
Sbjct: 172 ATAQDKEAAQLMGIPIARMIAITFIFSTMLACVAGLLVGPLFYV--SKEMGGMAGLKGFC 229

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             I+GG  S+S     +  L  +           +     F             I + +V
Sbjct: 230 GAIIGGFGSVSGAILGSLFLGVMEVYLAFYVSTAYKDAFAF-------------IIMIMV 276

Query: 332 ILMRSHSLLRLR 343
           +L     L   R
Sbjct: 277 LLFWPQGLFGER 288


>gi|319794641|ref|YP_004156281.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315597104|gb|ADU38170.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 291

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 108/298 (36%), Gaps = 26/298 (8%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           +    Y + + GL+++ G L +++      + +GA    +    +G++ W+++  + ++ 
Sbjct: 17  VNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAVLTWMAMEYFGINYWVMLIAAPIVI 76

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
           G  G+++    L++      +  L+++     ++        G +G+           T 
Sbjct: 77  GLFGVVIERLLLRWIYKLDHLYGLLLTLGLTLLIEGVFRSVYGVSGLPYDAPDALSSAT- 135

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                       F++   +  +V++    +  +    + +T +    R   +N +   + 
Sbjct: 136 ---------DLGFMVLPNYRAWVVVASLVICFATWYVIEKTRLGAYLRAGTENPRLVEAF 186

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              +       +A   A    AG   A         +   +  I+V ++V++GGM S+  
Sbjct: 187 GVNVPLMITLTYAFGCALAAFAGVLAAPVMQV--SPLMGQNLIIVVFAVVVIGGMGSIMG 244

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  L  +  L                  +    +T++ + + +V+L+R   L  
Sbjct: 245 AILTGLGLGVIEGLTKVF--------------YPEASSTVVFVIMVIVLLIRPAGLFG 288


>gi|237794556|ref|YP_002862108.1| ribose transport system permease protein RbsC [Clostridium
           botulinum Ba4 str. 657]
 gi|229260692|gb|ACQ51725.1| ribose transport system permease protein RbsC [Clostridium
           botulinum Ba4 str. 657]
          Length = 331

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 92/314 (29%), Gaps = 16/314 (5%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++ L  V+   ++        +     ++ +Q  I  + A G++ V+   G + L+    
Sbjct: 22  MILLGFVILCAVIGSLSSNFFTVTNWLNILVQCSIVGIIAVGMTFVI-ITGGIDLSVGSM 80

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            A  A    ++         +++    + +          +         I TL    IF
Sbjct: 81  LAFSAIVSGMMLKNGASIPVVILVALIIGTAIGFANGFFITKF--NVPAFIVTLATMSIF 138

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           + + +      N    I  +                 +     +   I +   L+G    
Sbjct: 139 RGLTLVVSDGKNQALSISKSASPDLFSKLTAFSKIGDKLGPVPIPIIIMIIIFLIG---- 194

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
                  L+ T        I  N++A       I   +L A+ ++     ++G    A  
Sbjct: 195 ----YYVLQYTTFGRNLYAIGGNREATRFSGINIGKIELLAYTITGLLCALSGVVLNARL 250

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
               P+     E   + ++VI      GG  ++S       I+  +      MN   F  
Sbjct: 251 GAALPNAGVGYEMDAIGAVVIGGASLAGGEGTISGTILGVLIIGVLNNGLNLMNVNPFYQ 310

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 311 QVVKGAVILVAVLV 324


>gi|256043536|ref|ZP_05446463.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|265989954|ref|ZP_06102511.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1]
 gi|263000623|gb|EEZ13313.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1]
          Length = 328

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 49/343 (14%), Positives = 116/343 (33%), Gaps = 28/343 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+  +  L +       L  +  ++    +G       + ++  +I+   +    L +V 
Sbjct: 1   MTELTQPLPQTRHSYAGLIGIVAIIAASVVGWFLFPDNL-ALLTRIIAIALLVLSLDLVT 59

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           G  G+ +L     +  GAY   I  + +      L+  +  +     G++ G   L+  G
Sbjct: 60  GYCGIATLGHAAHFGAGAYGAGIAAAHFGVTDPILMTVIGLLAGAVTGLVSGAVILRATG 119

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
               + ++ +  +F     K    T G  G+         G               F +Y
Sbjct: 120 LAQLVLSIAVVHLFHEAANKASGWTGGSDGLSGISPDPIFGI------------FEFDLY 167

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              +Y   + +  +S   + ++ R+      R ++++     ++  ++  A+L  + +S 
Sbjct: 168 GRTVYIYAVILLLISFIFLRYVVRSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISG 227

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  G++G    +     +  +         +S    GG  SL      T + +   ++  
Sbjct: 228 AVAGISGLSTQSPHRSSASTVSASPCRRKPLSCWCWGGAGSLFGGLVGTVVFMWFEDVVS 287

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             N +++               T++   L  V+L     L   
Sbjct: 288 TANPFHW--------------LTMVGALLIAVVLFAPRGLYGT 316


>gi|167587947|ref|ZP_02380335.1| inner-membrane translocator [Burkholderia ubonensis Bu]
          Length = 294

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/318 (13%), Positives = 105/318 (33%), Gaps = 26/318 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGIPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +GL  W ++ ++ ++ G  G+++    L++      +  L+++     ++        G
Sbjct: 63  YFGLPYWAMLVIAPVLVGVFGVVVERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 123 ASGQPYDVPSQLAGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMITLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +                     +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSILTGLMLGVIEGFTRVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLRLRT 344
            + +V+L+R   L     
Sbjct: 277 IMAIVLLIRPAGLFGKER 294


>gi|163791622|ref|ZP_02186021.1| ribose ABC transporter permease [Carnobacterium sp. AT7]
 gi|159873111|gb|EDP67216.1| ribose ABC transporter permease [Carnobacterium sp. AT7]
          Length = 323

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 92/312 (29%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  +V  +L+ +   +  +   + ++  Q+    + A+G++ V+   G + L+     A
Sbjct: 26  FLALIVLIILVTIVNPSFIAPTNLLNLLRQVSTNALIAFGMTFVI-ITGGIDLSVGSTLA 84

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +          GL   L + +S +     G + GL   K +          M+     
Sbjct: 85  LSSALMA-GAIASGLDPILAMVLSLLTGTIFGAVNGLLITKGKMAPFIATLATMTIYRGL 143

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+          G                      F      Y + + + ++ M     
Sbjct: 144 TLVYTDGNPITGIGDSFI------------------FKFVGRGYLLGIPFPVVLMIISFI 185

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + + L +         I  N+KA F         K   +A+S     +AG    +  D 
Sbjct: 186 LLYILLHKMTFGRKTFAIGGNEKASFIAGIKNDRIKTGIYALSGLMASLAGIIITSRLDS 245

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + S+V     + GG   L        I+  +      +    F   +
Sbjct: 246 AQPTAGTSYEMDAIASVVLGGTSLSGGRGRLVGTLIGALIIGTLNNGMNLLGISSFYQQV 305

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 306 VKGIVIIIAVLL 317


>gi|154245509|ref|YP_001416467.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154159594|gb|ABS66810.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 283

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 99/302 (32%), Gaps = 26/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   +Y + A GLS+V G LG+++        +G Y         GL   +   +
Sbjct: 5   LVDGLLLGGVYGVIATGLSLVFGVLGVVNFAHAEFLMLGMYVAWFAWRYLGLDPLIGSVL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++  A G  +    ++        A + ++     ++     +  G     V+     
Sbjct: 65  SFVVVFAVGYGVQRTLIQRVLKAPPAAQVFLTVGLMIVIENAALMVFGSDFRSVSVP--- 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                    +   +    +       Y  +    L+A++ L+L R+ +  A R +  +  
Sbjct: 122 --------YQVEGYRLGDIFIGAPYLYAFIAAVILAAALWLFLDRSWMGRAIRAVAQDPM 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +          AF +  A     GA                   +++ ++V+LGG+
Sbjct: 174 AATLVGVDTRRTYGLAFGLGVALTAFGGAVILPYITV--SPTIGGQFVVLMFTVVVLGGL 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++       ++  V  L   +      +L              + +    V+ +R   
Sbjct: 232 GSVAGALAGGIMVGIVQSLSTLVFPIQLQNLC-------------LFVIFIAVLALRPQG 278

Query: 339 LL 340
           L+
Sbjct: 279 LI 280


>gi|293602622|ref|ZP_06685065.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292818994|gb|EFF78032.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 336

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 97/301 (32%), Gaps = 18/301 (5%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     +I  + A G+++V G + +L+    +  AIGAY    +               
Sbjct: 45  LAGLAMGMIIFIVASGMTLVFGLMDVLNFGHGLFIAIGAYMAATVLGSMSDWTQTGSLWM 104

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATL--IMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            + +    MI+G+      G       +  +  +  + ILI    +  G+  I +     
Sbjct: 105 NLAAVLPAMIVGMLVAGAVGLAFERVIVRPVYGQHLKQILITMGGMIIGEEIIKMIWGPQ 164

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L   +   +R   F       E F    L+    +   ++  L RT +    R   +++
Sbjct: 165 TLSLPLPQALRG-AFLLGDAAIEKFRIVALVVGVLVLGGMLWLLNRTKLGLLIRAGVEDR 223

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +   SL   I    +  F   S   G+ G  +   +  +         N+++  ++++GG
Sbjct: 224 EMVESLGYRIRHLFVGVFVAGSMLAGLGGVLWGMYQQSV-VPQLGAQVNVLIFIVIMIGG 282

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S         ++  +      +                       +  +  ++L R  
Sbjct: 283 LGSTVGCLIGALLVGLMANYTGFL--------------LPKAALFSNIALMVAILLWRPQ 328

Query: 338 S 338
            
Sbjct: 329 G 329


>gi|33599747|ref|NP_887307.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella bronchiseptica RB50]
 gi|33567344|emb|CAE31257.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella bronchiseptica RB50]
          Length = 290

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/301 (14%), Positives = 100/301 (33%), Gaps = 26/301 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    Y + A G ++++G   L++      Y +GA+      +  G+   L +P 
Sbjct: 7   LINGIVLGHAYALIAIGWTLLLGVARLVNFGHGQMYMVGAFVTWWATTSAGMPYLLALPT 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +    G+ M    L+   +   ++ +IM+  F  ++     +  G  G         
Sbjct: 67  AMALGALIGLAMQRIMLRATFEQNLVSIMIMTLGFGYVIQGAASLIFGSTGQI------- 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +           +        +++    + A +   L  +      R + ++ K
Sbjct: 120 ----LDTAWSQRDIEVGELWVTWQDAAIVVAAIAVFAGLKWLLEGSRAGRLVRMVAEDPK 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   +       FA   A +  A    A     ++     F E II   +V+LGG+
Sbjct: 176 LAQLAGVDVRRIYYGVFAFEGAAVAFAAGMVAPRTPILT--SMGFEEVIITFVVVVLGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++    A   L     L   +    + +   F             + L  V+++R   
Sbjct: 234 GSVTGSYAAGVALGVFTALFSALVSPAYATAAAF-------------LVLIGVLVLRPGG 280

Query: 339 L 339
           L
Sbjct: 281 L 281


>gi|118587879|ref|ZP_01545289.1| ABC transporter permease protein [Stappia aggregata IAM 12614]
 gi|118439501|gb|EAV46132.1| ABC transporter permease protein [Stappia aggregata IAM 12614]
          Length = 306

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 48/308 (15%), Positives = 110/308 (35%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + A GL+++ G +GL++L     Y IGA+    + +  G  +  L+  
Sbjct: 10  VLNGLQFGIMLFLMAAGLTLIFGVMGLINLAHGSLYMIGAFCAAAVAAATGSFLLGLVAA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A  + A  ++  L   +          L   +    +L  +  I     G       + 
Sbjct: 70  LAGAAIAGALVELLVIRR----------LYTKDHLDQVLATFALILIFSEGTRWIFGSFP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   V   +         + Y ++   ++     ++  + L + RT +    R   ++++
Sbjct: 120 LFLDVPDFLSGPVTLPGGIEYPLYRLALIAVGLAVALGLWLLISRTRLGVQIRAGENDRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+
Sbjct: 180 MIAALGIDIARLYTIVFALGAALAGLAGALVGAIQSV--QVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM---RHTTLMVIALFLVILMR 335
            S+        ++     L            L    + ++     +  + I +  V+++R
Sbjct: 238 GSIKGALVGAILVGLTDTLGGIFLPEILKLFLDPSTATSVGSSLASMAIYILMAAVLILR 297

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 298 PAGLFGAR 305


>gi|154245301|ref|YP_001416259.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154159386|gb|ABS66602.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 324

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 56/277 (20%), Positives = 110/277 (39%), Gaps = 27/277 (9%)

Query: 67  SLNCVIAYAIGAYSYVILG-SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           S    + +A GAY+   LG S  G  I LL+  SA+ S   G+++GL  +++R  +  + 
Sbjct: 52  SFGHGMFFATGAYTVAFLGRSVGGGDIALLLAASAVSSVLLGLLVGLFVVRYRYIFFGML 111

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            L  S +  +IL K+  +T G  G+ +     F             F      ++  +YY
Sbjct: 112 NLAFSMVLYSILEKFFHLTGGSDGLRIRRPSAF------------GFAFDRAQFDTLIYY 159

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + L + F +A ++    R+ +  A + I+ N+     +  +  F  L  + +S+   G+ 
Sbjct: 160 LTLVLAFGAAYLVWRYLRSPLGQALKAIKSNETRLEYIGLSARFVMLVGYVISALLCGIG 219

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA     +   +P+   ++ +   + I ILGG+  ++     T +   V           
Sbjct: 220 GACLGIIQGIATPEYSYWTRSAEFVFIAILGGVGHVAGALTGTFVYEAVRTYAAAF---- 275

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                            ++   L  +IL     ++ L
Sbjct: 276 ----------VADSWQMILGFVLLAIILKAPTGIVGL 302


>gi|254488403|ref|ZP_05101608.1| urea ABC transporter, permease protein UrtC [Roseobacter sp.
           GAI101]
 gi|214045272|gb|EEB85910.1| urea ABC transporter, permease protein UrtC [Roseobacter sp.
           GAI101]
          Length = 388

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 48/367 (13%), Positives = 104/367 (28%), Gaps = 36/367 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +   L  L  +  ++     G       +     + L   + A  + +V G  G+LSL  
Sbjct: 14  WFIGLLGLFTLAVVVGSEATGTGLISTSMVKTLGKTLCLCLIAIAMDVVWGYCGILSLGH 73

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLL-----------------IPVSAMISGACGMIMGLP 113
              + IG Y+  +        I +L                    + +            
Sbjct: 74  FAFFGIGGYAIGMWLMYARTEIIVLNSLEGQIIPPTSQEVTDAIGNQIFGVVGSSEFPWL 133

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
                  +L +  + +      ++  W    +   G+Y++     +   +   +      
Sbjct: 134 WALSDSLFLQLLMVALVPGLLALVFGWLAFRSRVTGVYLSILTQAMTLALSLWLFQNDSG 193

Query: 174 SSF------------------VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                 +  +  +        L   +  W+    + +  + IRD
Sbjct: 194 LRGNNGLSGLQNIPGFEQTPQAVISLVFFLGSALALALGYLLFAWVVSGKMGSVVQGIRD 253

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N+     L   +   KL  F +++   G+AGA +      I+P       +I +   V +
Sbjct: 254 NEARVRFLGYRVESYKLFIFTLTAVVSGIAGALYYPQAGIINPAELATIASIYLAVWVAI 313

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG   L       A +  +     G        L  +   +      L+ ++   V L  
Sbjct: 314 GGRGRLYGAVIGAAFVSLLSSWFTG-GGAPAIDLGFYTILWTDWWLVLLGVSFVCVTLFF 372

Query: 336 SHSLLRL 342
              +  L
Sbjct: 373 PKGIGGL 379


>gi|145591961|ref|YP_001153963.1| inner-membrane translocator [Pyrobaculum arsenaticum DSM 13514]
 gi|145283729|gb|ABP51311.1| inner-membrane translocator [Pyrobaculum arsenaticum DSM 13514]
          Length = 361

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 54/338 (15%), Positives = 107/338 (31%), Gaps = 34/338 (10%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           I + IY ++   L++  G LGL     V+  A+G  +   + ++  L I+     +++  
Sbjct: 17  ILVAIYGIYVLSLNLEAGYLGLPQFGKVMFLALGGIAVGGIATKIALLIYSRAISASLGI 76

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP-----ITNGKAGIYVADRLYF 158
                +    S         I ++     F+ I+          I  G  G+ +A     
Sbjct: 77  SPLSNLGTYCSTYQYQTIDIINSIFAKSPFEGIVFFLMAVVLATILGGVFGVLMAGPALR 136

Query: 159 LGTT--------------------------VRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           L                             V   +    F       +     V+     
Sbjct: 137 LREDYLGIFLLVSAEMVRVVSTYTPEVACGVFGAVVPDPFKWLGEWRQWAYLVVVALFLL 196

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           LS  ++  L  +    A R IRD + A       I+  ++   A +SA  G+AGA     
Sbjct: 197 LSFVVLERLGNSPFGRALRAIRDAEVAARVFGKDIVRFRVRVLATASALGGVAGALLVFY 256

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              +   MF   E     +++I+GG+ +        A+   + ++      Y        
Sbjct: 257 NTYVQMGMFVPVETFKAWAMLIIGGVGNNVGALVGVAVYFILDKVLS---MYKEGIRQVV 313

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           +         +  I + LV++ R   ++  +       
Sbjct: 314 NVDPVFFQYIIFGIIIILVLMYRPQGIIGEKPAKTLKR 351


>gi|154245651|ref|YP_001416609.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154159736|gb|ABS66952.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 294

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 93/311 (29%), Gaps = 20/311 (6%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                  + +  +Q  IY   A GLS++ G L +++        +  Y      S  G+ 
Sbjct: 3   PLILSFAVVNGLLQGGIYGGIALGLSLIFGVLRVVNFAHGSFLMLSLYLSFWCWSLLGMD 62

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            +L      +++      +G    +     L +    +     + L+    I      + 
Sbjct: 63  PYLSA----LVTVPAMFALGYLVQRVIISPLIVRERALVVEPLSALLLTCGIFLVVDNLA 118

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           +      + +   S           +  +            ++ ++ +WLR + +  A R
Sbjct: 119 LMAFGPDVRSVQLSYYMP-SVMLGPIPVDTPRLIAAASSIGVAVAVSMWLRYSHLGRAIR 177

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
               N+ A       +       F +  A +G+ GA  A             +  I    
Sbjct: 178 ATAQNRDAAAMSGIDVPQVYAVTFGLGCAILGLFGALIAPFIPV--NPQIGVAFGIKSFI 235

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +V+LGGM SL        ++     +          ++                    LV
Sbjct: 236 VVVLGGMGSLPGSIIGGLVIGVFEAVASQFVTATSAAIFSLG-------------LFILV 282

Query: 332 ILMRSHSLLRL 342
           +L+R   ++  
Sbjct: 283 LLVRPAGIMGR 293


>gi|239833654|ref|ZP_04681982.1| monosaccharide-transporting ATPase [Ochrobactrum intermedium LMG
           3301]
 gi|239821717|gb|EEQ93286.1| monosaccharide-transporting ATPase [Ochrobactrum intermedium LMG
           3301]
          Length = 359

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 97/309 (31%), Gaps = 10/309 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++   +  +   A  +     ++ +Q+    +   G + V+   G + L+     A+  
Sbjct: 49  LIILAAIFSVTSSAFMTVNNAMTIALQVTSIALLGIGATYVI-ITGGIDLSVGSVLALAG 107

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               +      L I L + +  +    CG+I G    + +      ATL M  I + + +
Sbjct: 108 VVAALAVKELSLPIPLAMLLGILTGSLCGLINGFVITRLKLPPFI-ATLGMMLIARGVAL 166

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +                L          I    FP   V+    + Y ++ M  ++ +  
Sbjct: 167 QITGARAVSGLGESFGVLGNGSLFRIESIDEQGFP---VVTFPGIPYPVVLMIVIAIAAA 223

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           L L RT +      I  N +A       +       + VS    G+ G    +      P
Sbjct: 224 LVLNRTVLGRHIYAIGSNAEAARLSGVNVARVTAFTYIVSGTLAGLTGCVLMSRLVTAQP 283

Query: 259 DMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           +     E   + S VI     +GG+ ++S     + ++  +           F   +   
Sbjct: 284 NEGVAYELDAIASAVIGGTSLIGGVGTISGTFIGSFVIGILRNGLNMNGISAFTQQIIIG 343

Query: 314 CSFNMRHTT 322
               +    
Sbjct: 344 LVILVTVWI 352


>gi|218672494|ref|ZP_03522163.1| amino acid ABC transporter, permease protein [Rhizobium etli GR56]
          Length = 233

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 63/121 (52%), Positives = 85/121 (70%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
             + KI  L  V+YP+++   +GA  S K++D+ GIQILIYVM AWGL+IVVG  GLL L
Sbjct: 105 RHFLKIALLALVLYPVVIVALVGAQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDL 164

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
             V  YA+GAYSY +L S +GLS W+L+P+S +++   G+I+G P L+ RGDYLAI TL 
Sbjct: 165 GYVAFYAVGAYSYALLSSYFGLSFWVLLPLSGILAALWGVILGFPVLRLRGDYLAIVTLA 224

Query: 129 M 129
            
Sbjct: 225 F 225


>gi|293603967|ref|ZP_06686381.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292817660|gb|EFF76727.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 295

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 109/303 (35%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +    Y M + GL+++ G L +++      Y +GA+   +  S  GL+ W+++ +
Sbjct: 16  LLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMLGAFVAWMGLSYLGLNYWVMLIL 75

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  G+++    L+       +  L+++     ++        G +G         
Sbjct: 76  APLVVGLFGILIEKLLLRHLYKLDHLYGLLLTFGLTLLIEGLFRSFYGVSGQPYPTPDAL 135

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G T             F++   +  +V+     +  +    + RT +    R   +N +
Sbjct: 136 RGAT----------NLGFMVLPNYRGWVVAASVVVCLATWFVIERTRLGALLRAGTENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +    A  G AG   A         +   +  I+V ++V++GGM
Sbjct: 186 LVEAFGVNVPRMITLTYGFGVALAGFAGVLAAPVLQI--SPLMGSNLIIVVFAVVVIGGM 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L  +  L                  +    +T++ I + +V+L+R   
Sbjct: 244 GSIMGAIVTGLGLGVIEGLTKVF--------------WPEASSTVVFIIMAIVLLIRPAG 289

Query: 339 LLR 341
           L  
Sbjct: 290 LFG 292


>gi|163845069|ref|YP_001622724.1| hypothetical protein BSUIS_B0948 [Brucella suis ATCC 23445]
 gi|163675792|gb|ABY39902.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 295

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 54/318 (16%), Positives = 114/318 (35%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           +++   +        +    I    Y M + GL+I+ G L +++      Y +GA+   +
Sbjct: 1   MVMIFGIPLQALLGQLLVGLINGSFYAMLSLGLAIIFGLLRIINFAHGAQYMLGAFVGYL 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L S  G+S W  + ++ +I G  G I+   +L    +   +  L+ +     ++      
Sbjct: 61  LLSWLGISYWPALVLAPLIVGLGGAIIERVALSRLYNLDPLYGLLFTFGLALVIEGTFRY 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G AG   A      G               F+    +  +V++   F+     L + +
Sbjct: 121 YYGAAGQPYAVPPSLAG----------GRNLGFMFLPNYRAWVVVASLFVCLGTWLLIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N     +    +       +A+ SA  G+AG   A         +   
Sbjct: 171 TKLGAYLRAATENPTQVKAFGINVPLLLTFTYALGSALAGLAGIMAAPIYQV--SPLMGS 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  I+V ++V++GGM S+        +L     L                  +    + +
Sbjct: 229 NIIIVVFAVVVVGGMGSILGAIITGYVLGIAEGLTKVF--------------YPEASSIV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           + + + +V+L+R   L  
Sbjct: 275 VFVIMAIVLLVRPAGLFG 292


>gi|262377155|ref|ZP_06070380.1| branched chain amino acid ABC transporter permease [Acinetobacter
           lwoffii SH145]
 gi|262307893|gb|EEY89031.1| branched chain amino acid ABC transporter permease [Acinetobacter
           lwoffii SH145]
          Length = 546

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/310 (11%), Positives = 98/310 (31%), Gaps = 17/310 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      I ++ A GL+I  G LG++++       IGAY+  ++ S +   +   +  
Sbjct: 254 LFSGLSTASILLLAALGLAITYGLLGVINMAHGELIMIGAYTTYVVQSLFKSYLGSYVEW 313

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +     ++             +   +     + +L  +         + +      
Sbjct: 314 YLIAAIPAAFLVSGLIGMLIER--TVIRPLYGRQLETLLATFGVSLILMQLVRMTFGAQN 371

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +  +  S +      +  ++       +++    +   ++  L +T      R +  N++
Sbjct: 372 VEVSNISWLSGGISITPSLMLPYNRIAIIVFTIAVLLLLVYLLNKTRFGLFVRAVTQNRQ 431

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              ++        + AF + S   G+AG   A   +        +  +  ++ +V     
Sbjct: 432 MAQAVGIRSSRIDMMAFGLGSGLAGLAGCALAQVGNVGPDLGQNYIIDAFLVVVVG---- 487

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                      +      +   +     ++ L+      +    L+V+   L I  R   
Sbjct: 488 ----------GVGQVWGAVLAALGLGISSTALEIGIGAVLAKIVLLVLV-ILFIQKRPQG 536

Query: 339 LLRLRTPSNF 348
           L  ++     
Sbjct: 537 LFAIKGRFVE 546


>gi|126728016|ref|ZP_01743832.1| ABC sugar transporter, inner membrane subunit [Sagittula stellata
           E-37]
 gi|126710981|gb|EBA10031.1| ABC sugar transporter, inner membrane subunit [Sagittula stellata
           E-37]
          Length = 356

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 87/313 (27%), Gaps = 18/313 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +   +   L      S   +  +  Q+ I  + A   S+V+ + G + L+     
Sbjct: 48  LIVLVLSIVVFGILLGSKFFSPFALTLILQQVQIVGIVAAAQSLVILTAG-IDLSVGAIM 106

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +        RYG+   + I          G I G    K +     +   +   +  
Sbjct: 107 VLSSVVMGQFTFRYGIPAPVSILCGLACGTLMGFINGWLVAKVKLPPFIVTLGMWQIVLA 166

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +     T     I     L               F +   +    + Y  + M  L 
Sbjct: 167 TNFLYSANETIRAQEIEAQAPLLQF------------FGTVIALGGARLTYGAIFMLLLF 214

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L +TA       + D++++            +S +  S      AG        
Sbjct: 215 LFLAYMLNQTAWGRHVYAVGDDKESAELSGIEANKVLISVYMASGLICAFAGWALVGRIG 274

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   + +    + ++VI      GG  ++        I+         +      + 
Sbjct: 275 SVSPTSGQLANIESITAVVIGGISLFGGRGAVMGSLFGALIVGVFTLGLRLLGADAQWTY 334

Query: 310 LKFDCSFNMRHTT 322
           L            
Sbjct: 335 LLIGVLIIGAVAV 347


>gi|46199269|ref|YP_004936.1| branched-chain amino acid transport system permease protein livH
           [Thermus thermophilus HB27]
 gi|46196894|gb|AAS81309.1| branched-chain amino acid transport system permease protein livH
           [Thermus thermophilus HB27]
          Length = 322

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 94/315 (29%), Gaps = 12/315 (3%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
               + +    I   IY M A G ++V G L L++      + IGA + V +       I
Sbjct: 7   VLLPQVLFDGFILGFIYAMIALGYTMVYGVLELINFAHSEIFMIGAVAGVEVFRYLAPLI 66

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
                +  +       + GL ++              +      L+    ++     +  
Sbjct: 67  PNGYLLLLVAVVVGAAVAGLTAILVERMAYRPLRRRGTTNRLVPLVTAIGVSFFLQDLVR 126

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY------VLLGMCFLSASIILWLRRTAI 206
                +       +        SF ++   ++       V++    +   +   + RT +
Sbjct: 127 LIEGLWHNEFFLRMRTIPDLEGSFTLFGGAIFIQTKSVIVIVVSVLMLWGLTYLVNRTKL 186

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A R +  +      +           F +  A  G+AG  FA     I+P +  F   
Sbjct: 187 GMAIRAVAQDLTTASLMGINPDQIISRTFLIGGALGGVAGVLFALIYTTINPYV-GFLPG 245

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I   +  +LGG+ ++        +L  +                            +  +
Sbjct: 246 IKAFTAAVLGGIGNIPGAMLGGLVLGQLENFFGTYLPILTAGNFG-----TEYKDVVAFL 300

Query: 327 ALFLVILMRSHSLLR 341
            L  ++L R   LL 
Sbjct: 301 ILIFILLFRPQGLLG 315


>gi|167913564|ref|ZP_02500655.1| sugar ABC transporter, permease protein [Burkholderia pseudomallei
           112]
 gi|167921503|ref|ZP_02508594.1| sugar ABC transporter, permease protein [Burkholderia pseudomallei
           BCC215]
 gi|217423224|ref|ZP_03454726.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 576]
 gi|254182709|ref|ZP_04889302.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 1655]
 gi|254189443|ref|ZP_04895953.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|254299504|ref|ZP_04966953.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 406e]
 gi|157809689|gb|EDO86859.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 406e]
 gi|157937121|gb|EDO92791.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|184213243|gb|EDU10286.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 1655]
 gi|217394132|gb|EEC34152.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 576]
          Length = 329

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/314 (11%), Positives = 87/314 (27%), Gaps = 29/314 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ V   ++L        + +    +  Q  I  + A G++ V+     + L+     
Sbjct: 31  IPIVFVALCVVLAFASPYFLTWRNWSDILRQTSINGILAIGMTYVI-LTKGIDLSVGSVL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      + G+        +   + +  GA    +   ++        +ATL M  + +
Sbjct: 90  ALAGIVSGLAGAAGH--GLAVSLAAGVACGAALGAINGVAIARLNVPPFVATLGMLSVAR 147

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                         G+            +              +    + +  + +    
Sbjct: 148 --------------GVTYIANDGSPVANLPDDYLSLGIGRLGPLGMPVLIFAGVALACWW 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                  R T        +  N+K+  +    +     S + VS A  G+AG   AA   
Sbjct: 194 VL-----RYTTYGRYLYAVGGNEKSARTSGIGVRKVVFSVYVVSGALAGLAGMILAARTT 248

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                    S  +  I+ V++GG         +        ++  +      +    +  
Sbjct: 249 SA-LPQAGVSYELDAIAAVVIGGTSLSGGQGGVVGTLFGALLIGVINNGLNLLGVSSYYQ 307

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 308 QIAKGLIIVLAVLI 321


>gi|320335597|ref|YP_004172308.1| ABC transporter integral membrane subunit [Deinococcus maricopensis
           DSM 21211]
 gi|319756886|gb|ADV68643.1| ABC-type transporter, integral membrane subunit [Deinococcus
           maricopensis DSM 21211]
          Length = 296

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 100/304 (32%), Gaps = 22/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    Y + + GL+++ G L +++      Y +GA++   LG  +GL  W  + +
Sbjct: 10  VFNGLVNGAFYALLSLGLAVIFGMLRIVNFMHGALYMLGAFTAFALGQAFGLGFWPSLLL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ GA GM++    L           L+++     +                +     
Sbjct: 70  APLLVGALGMLLERTLLSRLYGLDHSYNLLLTFGLTLLTQDLVKQVMLSRFDVSSAPFT- 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                            FVI+  +  +V+     +       + RT +    R   +N  
Sbjct: 129 -----PPAALAGVVNLGFVIFPKYRLFVIALALAVCLITWFVIERTRVGATIRAATENPG 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       F V  A  G+AG   A                I   ++V++GGM
Sbjct: 184 VTRAFGINVGRWVTGVFGVGVALAGLAGVLAAPIYSV--EPYMGAELIITTFAVVVIGGM 241

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +  +  +         N+              L+ I + +V+L+R   
Sbjct: 242 GSILGSVVTGFAVGVLSAIGAAFYPPIANT--------------LVFILMAVVLLVRPSG 287

Query: 339 LLRL 342
           L  L
Sbjct: 288 LFGL 291


>gi|295680830|ref|YP_003609404.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295440725|gb|ADG19893.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 299

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 99/307 (32%), Gaps = 18/307 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++         Y + A G ++V G + L++      + +GA+          L+   L 
Sbjct: 6   QFVIEGLTTGSFYALVALGYTMVYGIIRLINFAHGDLFMVGAFIG--WTGLMVLASAHLP 63

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A++      +    +L    + LA   L+ +     ++         + G+ +    
Sbjct: 64  LALALLIAVVAAMTVTGALGLLIERLAYQPLLRAPRLSILITALGVSLALQNGVLLIYGA 123

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                T   ++    F    V        +++    L  ++  ++  T +  A R +  +
Sbjct: 124 --GFRTYPHVLSQAGFELHGVQITFAQIGIIVASLALMLALYFFVHHTFLGTAMRALAID 181

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           Q A   +   +       F + S    +AG        +I+  M  F   +   +  +LG
Sbjct: 182 QDAARLMGIDVERLIQLTFLLGSVLAAVAGVMEGLYYTQINFFM-GFVLGLRAFTAAVLG 240

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++        ++  +     G     +  +  F               L  V++++ 
Sbjct: 241 GIGNIPGAMAGGILIGLLEAFGAGYVSSQWTDVFVFG-------------VLIAVLVIKP 287

Query: 337 HSLLRLR 343
             L   R
Sbjct: 288 TGLFGER 294


>gi|254438230|ref|ZP_05051724.1| amino acid or sugar ABC transport system, permease protein,
           putative [Octadecabacter antarcticus 307]
 gi|198253676|gb|EDY77990.1| amino acid or sugar ABC transport system, permease protein,
           putative [Octadecabacter antarcticus 307]
          Length = 316

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 59/313 (18%), Positives = 109/313 (34%), Gaps = 30/313 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                +    + ++I  ++  A   +++ G  GLLS+        G Y    L    GL 
Sbjct: 2   PLTGDRGTMRLVVEIAYFLALAQMWNLLAGYAGLLSVGQHAFIGFGGYMLFALVIHAGLP 61

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
               +P++ +I+ A  + +GL   +  G Y AI T +++E+F+    +   +  G     
Sbjct: 62  PIWSLPLAGLITAAISIPVGLIVFRLAGPYFAIGTWVVAEVFKLAFFEVSALGGGSG--- 118

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                         L        S    E+ +Y   + +   S   +  L R+ +     
Sbjct: 119 ----------VSLPLDAVRSIADSREGRELTIYLCAIAIATASTLGVWALLRSRLGLGLT 168

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK--FSENIIV 269
            IRDN  A  S+       + S F   +   GM GA     + RISP         +  V
Sbjct: 169 AIRDNPVASASIGIDTFRLRFSVFVAVAGITGMIGALIFLQKLRISPVAAFDVMEWSAAV 228

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           I +V++GG+  +       A+   + EL                      +   + +   
Sbjct: 229 IFMVVIGGIGRIEGPFVGVAVYFLLRELLSDY---------------GTWYLIALGLFAI 273

Query: 330 LVILMRSHSLLRL 342
           +++L     L  L
Sbjct: 274 ILMLFARQGLWGL 286


>gi|303327667|ref|ZP_07358107.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Desulfovibrio sp. 3_1_syn3]
 gi|302862028|gb|EFL84962.1| high affinity branched-chain amino acid ABC transporter, permease
           protein [Desulfovibrio sp. 3_1_syn3]
          Length = 301

 Score = 67.2 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 87/289 (30%), Gaps = 3/289 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L L++      + IGAY  + L     LS  L +P+
Sbjct: 8   LLNGLAVGGIYALVALGYTMVYGVLKLINFAHGDLFTIGAYLGLTLLVSCNLSGMLPLPL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +       ++                     +  + ++     +       +      
Sbjct: 68  AVLAVFIMVGLLVALLGFLLERAAYRPLRNAGRL--SAVVSALGASIFFQNAVMLIYGAR 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +      L   F      V        V+     L   +  +++RT    A R +  +  
Sbjct: 126 VYVYPDFLRPDFTVHLFGVAVSGVRLLVIAASVLLMLGLSAFIQRTRTGAAIRAVAIDPG 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       F +     G AG        +I   M  +S  +   +  ILGG+
Sbjct: 186 AARLMGINVDRIISLVFLIGPGLGGAAGLMVGIYYGQIDFTM-GWSYGLKAFTAAILGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            ++        +L  +  L  G     +   + F     +       I 
Sbjct: 245 GNIPGAMIGGLLLGVIEALAAGYIAIAWKDAIAFLVLILILIIRPTGIL 293


>gi|110680747|ref|YP_683754.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter denitrificans OCh 114]
 gi|109456863|gb|ABG33068.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter denitrificans OCh 114]
          Length = 304

 Score = 66.8 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/310 (11%), Positives = 89/310 (28%), Gaps = 14/310 (4%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
            + + +        IY M A G++++ G + L++       A   ++ ++  +     ++
Sbjct: 3   ATPQLLFDALSLGGIYAMAALGIALIFGVMKLVNFAHGQYIAFCVFALIVPSTDAVAVMF 62

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L    + ++     +I    ++                           +      +  +
Sbjct: 63  LGKAPAIILIPVLLLIGAAIAVASELFVFRHMRNATPVAMMVSSFALGFVIQNTLLLIYS 122

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            R   +                     +    V+     +  ++ L L+RT I    R  
Sbjct: 123 SRPKAVSLW---PELNQPVSIIGASIPLLQIIVIFTTLLVVVTLALLLKRTRIGLEMRAA 179

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +N      L          AFA+S A    A A    ++  ++         ++     
Sbjct: 180 AENFTMARLLGVRANVVITGAFALSGALAA-AVALIMVTQTGVADIRMGGQIMLVAFIAT 238

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ++GG+ SL     A  ++     +  G                       +   + + +L
Sbjct: 239 VIGGLGSLPGAVAAGFLIGAASVVLQGF----------LPLEARPFRDAFLYTLVIVSLL 288

Query: 334 MRSHSLLRLR 343
           ++   L   R
Sbjct: 289 LKPDGLFAPR 298


>gi|71907069|ref|YP_284656.1| inner-membrane translocator [Dechloromonas aromatica RCB]
 gi|71846690|gb|AAZ46186.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Dechloromonas aromatica RCB]
          Length = 525

 Score = 66.8 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/290 (10%), Positives = 79/290 (27%), Gaps = 17/290 (5%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
             G +G++++       +GAY+   + + +       I      +               
Sbjct: 253 TYGVMGIINMAHGELLMVGAYATYGMQTLFRAYFPDAIDWYLPAAIPVAFFAAALVGVVM 312

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
                +   +     + +L  W           V      +  +  S +         +I
Sbjct: 313 ER--TVIRWLYGRTLETLLATWGLSLVLIQSARVLFGAQNVEVSNPSWMSGGIEIMPNLI 370

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                  ++    F+   + + + +T +    R +  N+     +          AFA+ 
Sbjct: 371 LPWNRIIIVGFAMFVLFLVWVLMNKTRLGMFVRAVTQNRPMAGCVGVPTSRIDTMAFALG 430

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           +   G+ G   +   +        +  +  ++ +V    +  L+    A   L    +L 
Sbjct: 431 AGIAGLGGVALSQISNVGPDMGQGYIVDSFMVVVVGG--VGQLAGAVWAALGLGIFSKLL 488

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
            G                       +++ + + I  R   +  L+     
Sbjct: 489 EGWAGAVIAK-------------ISILVCIIIFIQKRPQGIFALKGRFVE 525


>gi|84687178|ref|ZP_01015059.1| branched-chain amino acid ABC transporter, permease protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84664766|gb|EAQ11249.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 336

 Score = 66.8 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/327 (9%), Positives = 84/327 (25%), Gaps = 19/327 (5%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
            S   +           + A G++++ G L   +       + G    ++    +     
Sbjct: 10  LSNFVLIPAMAYGSQLALGALGVTLIYGILRFSNFAHGDTMSFGTMVVILFTWLFQSWGL 69

Query: 94  ---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                    L +P    I+    +        +     A   +++      + +    + 
Sbjct: 70  SLGPLPVALLALPFGIAITALLVLGTDKVVYAYYRRVKAKPIVLVMASIGVMFVLNGVVR 129

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                                  + +   +  +  +      ++    + A +  +L RT
Sbjct: 130 LIIGPGDQNFADGARFVFTARDFKEWSGLAEGLALKSTQLITVITAAIVVALLFWFLNRT 189

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
               + R   DN+                 + + +A   +AG  +   +         F 
Sbjct: 190 RTGKSMRAYSDNEDLALLSGINPERVVAITWIIVAALAAIAGTLYGLDKSF--KPFTYFQ 247

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSLLKFDCSF 316
             + + +  I+GG+ S         ++             +   +    +          
Sbjct: 248 LLLPIFASAIVGGLGSPLGAIAGGFVIAFSEVMVTYAWKKVVTYIVPEAWAPDGLLQLLS 307

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLR 343
                 +    L +V+L R   L R +
Sbjct: 308 TDYKFAVSFAILVIVLLFRPTGLFRGK 334


>gi|297530144|ref|YP_003671419.1| inner-membrane translocator [Geobacillus sp. C56-T3]
 gi|297253396|gb|ADI26842.1| inner-membrane translocator [Geobacillus sp. C56-T3]
          Length = 287

 Score = 66.8 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 94/302 (31%), Gaps = 27/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GL++V G L + +      Y +G Y  +   ++ GL   L + V
Sbjct: 8   LLNGLTVGSVYSLVALGLTLVYGILHIPNFAHGALYMMGGYVTLTAMTKAGLPYGLAVVV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S    G  G++M         D   +   I +      L  +     G     +      
Sbjct: 68  SMAAVGMLGVLMERLVFYPLRDAPPLHDKIAAIGILLFLEAFVQFVWGADYHTMPTP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +   +    ++     +   + L+L++T I ++   +  N++
Sbjct: 125 ---------YGDVVSIFGLTLTVQRILIIASAVIIMILLYLFLKKTFIGSSIIAMAQNRE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        +  F +S +   +A +  +     +          +    I+ILGGM
Sbjct: 176 GANLVGINTNKVAMLTFFLSGSLAALAASLASP--INLVFPGMGHLVILKAFVIIILGGM 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL     L                   N     +    L +++ ++ + 
Sbjct: 234 GSIPGAIVGGYILGFSESLGATYVS-------------NDYKDIIAFAILVIILTVKPNG 280

Query: 339 LL 340
           L 
Sbjct: 281 LF 282


>gi|303232827|ref|ZP_07319511.1| branched-chain amino acid ABC transporter, permease protein
           [Atopobium vaginae PB189-T1-4]
 gi|302481017|gb|EFL44093.1| branched-chain amino acid ABC transporter, permease protein
           [Atopobium vaginae PB189-T1-4]
          Length = 551

 Score = 66.8 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/325 (8%), Positives = 86/325 (26%), Gaps = 9/325 (2%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F L+   Y  I+ +  ++  +   +      +   + ++  Q    +  A G++ ++   
Sbjct: 221 FLLKNGLYIVIMLVFILLCAITPAIKGTQLLTYTNVINIFQQAAPRMFLALGVAGLILLT 280

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G   L+      +G  +  I+  +   +  +      +          +         L 
Sbjct: 281 G-TDLSIGRMVGMGMTASTIIMHQGINTGQVFGITFDLTGIPIVAR--ILMALVVCIVLC 337

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
                ++  F         I+     + +   + +    V         P+  +      
Sbjct: 338 TIFTSIAGFFTAKFTMHPFISTMANMLIIFGIITYATKGVSFGAIEPTIPNMVIPKIGDF 397

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
             +++      A +     +T        +  N +A       +    + AF ++    G
Sbjct: 398 PTIIVWAVAAIAVVWFIWNKTTFGKDLYAVGGNPEAAAVSGINVFRVMMGAFIMAGILYG 457

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVEL 297
                            +    ++  I+  ++      GG+  +S +     I   +   
Sbjct: 458 FGSWLECMRMVGSGSAAYGQGWDMDAIAACVVGGVSFTGGIGKISGVTVGVLIFTALTYS 517

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTT 322
              +        +          T 
Sbjct: 518 LTILGIDTNLQFVFSGIIILAAVTL 542


>gi|256828333|ref|YP_003157061.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
 gi|256577509|gb|ACU88645.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
          Length = 304

 Score = 66.8 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 92/294 (31%), Gaps = 1/294 (0%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           + + +       Y + A G ++V G L L++      + +GAY    + +        L 
Sbjct: 7   QNLFNAFQWGSFYSLIALGYTLVYGVLRLINFAHGDIFMVGAYIAFFIATAILGMAVSLP 66

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +       ++    +    + +A   L      +  ++    +            L
Sbjct: 67  GWMVLAMVIPLTMILTAVVGVSLERIAYRPLRRKGAHRLYVVITALMCGLVLENGNLALL 126

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                +   L+    +    +        V+     +   +   + +T I  A R I  +
Sbjct: 127 GASRKSFPELVDKVVYTVGDLSMTNLKIGVVFSAILVFIFLHFIVTKTKIGMAMRAISYD 186

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   I    +  F + S+F G+AG  FA S   + P M         I+ V+ G
Sbjct: 187 KFAVPLMGIPIDTVIVFTFILGSSFAGLAGLLFALSYPILDPYMGAMIGWKAFIAAVV-G 245

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           G+  +        +L  V  L   +    +  L+ F     +       +    
Sbjct: 246 GIGDIRGAFLGGFLLGFVEILVVAVFPSTYRDLIAFAILMTILCIKPTGMFGVA 299


>gi|319784624|ref|YP_004144100.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170512|gb|ADV14050.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 353

 Score = 66.8 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/314 (14%), Positives = 90/314 (28%), Gaps = 19/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +   +      G   S   +  +  QI I  +     ++V+ + G + L+  +  
Sbjct: 44  LIVLVLAIIVFGITIGGRFFSSYTLTLILQQIAIIGILGAAQTLVILTAG-IDLSIGVIM 102

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I A         YG+   L + +      ACG++ G+     +                
Sbjct: 103 VISAVIMGNCAVSYGMPSALAVAIGLAAGAACGLLNGVLVAYMKLPPFI----------- 151

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    I      IY A+                 F  SF +    +   ++    L 
Sbjct: 152 -VTLGTWNIVMATNFIYSANETIRDTDVDTQAPLLHLFAISFKVGTAVLTLGVIATVLLV 210

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L  TA       + D+Q+A            ++ + ++      A         
Sbjct: 211 MILWYVLNHTAWGRHVYAVGDDQEAAKLSGIQTKKVLMTVYTLAGLIAAFAAWVSIGRNG 270

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            ISP       N+  I+  ++GG+       S+        I+  V      +       
Sbjct: 271 SISPSAAVTDYNLQAITATVIGGISLFGGRGSILGTLFGAMIVGVVSMGLNMLGADPQWK 330

Query: 309 LLKFDCSFNMRHTT 322
           +L            
Sbjct: 331 VLLTGVLIIGAVAV 344


>gi|89901899|ref|YP_524370.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89346636|gb|ABD70839.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 333

 Score = 66.8 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 96/311 (30%), Gaps = 20/311 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L  +  +   L   A  +Q  I  +     +  + A   + ++ + G + L+  +  
Sbjct: 26  FASLIALIAVFTVLKPDAFMTQDNIIGILQSTTVIGVLAIASTFIIITSG-IDLSVGVLM 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A    +     GL + L I  +  +    G + GL   K R                
Sbjct: 85  TFCAVMAGVFMVNLGLPMPLGIVCALAMGALSGCLSGLAITKLRVPPFIAT--------- 135

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +    +  G + I    R  +                  +I  + +   +L +  ++
Sbjct: 136 ---LGMMMMLKGSSLIITQTRPIYFSDVAGFDQIALGSLIGDLIPSLPIPNGVLILFLVA 192

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L +TA+      +  N++A       +   K+  +A S    G+AG   A+  +
Sbjct: 193 VVCAVILNKTALGRYTFALGSNEEAVRLSGVNVNRWKIIIYAFSGGICGIAGLLIASRLN 252

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                       +  I+ V++      GG+ ++        I+  ++     M+      
Sbjct: 253 SAQ-PALGQGYELDAIAAVVIGGTSLSGGVGTILGTLIGAFIMSVLINGLRIMSVAQEWQ 311

Query: 309 LLKFDCSFNMR 319
           ++       + 
Sbjct: 312 MVLTGLIIILA 322


>gi|327398299|ref|YP_004339168.1| ABC transporter integral membrane subunit [Hippea maritima DSM
           10411]
 gi|327180928|gb|AEA33109.1| ABC-type transporter, integral membrane subunit [Hippea maritima
           DSM 10411]
          Length = 298

 Score = 66.8 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 85/269 (31%), Gaps = 11/269 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++        +G Y   +  +   L  W    +
Sbjct: 10  LVNGISLGSLYGLVAIGYTMVYGVIRLINFAHGDVMMVGMYFAFVGVAMMFLPWWAAFLL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S   +   G+++   + K   +   I+ LI +      L     +  G           F
Sbjct: 70  SMFATAIVGVLIDRIAYKPLRNASRISALITAIGVSFFLENLFLVVFGGVPKAFPVPSLF 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G              + VI+        +        ++  L RT    A R +  + +
Sbjct: 130 GGA----------INVNGVIFPNIAIITPIVAIVFLLMLLFVLYRTKYGMAMRALSLDME 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       FA+ S    + G F+A     I+  +      +   +  +LGG+
Sbjct: 180 TVRIMGINVDLIISMVFAIGSLLAALGGVFWAMRYPAIN-PLIGIMPGLKAFAAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFN 307
            S++  A    I+     L          
Sbjct: 239 GSVTGAAVGGFIIGISEILVVAFFPSLAG 267


>gi|163815041|ref|ZP_02206428.1| hypothetical protein COPEUT_01197 [Coprococcus eutactus ATCC 27759]
 gi|158449724|gb|EDP26719.1| hypothetical protein COPEUT_01197 [Coprococcus eutactus ATCC 27759]
          Length = 552

 Score = 66.8 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/318 (9%), Positives = 83/318 (26%), Gaps = 9/318 (2%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y  I+ +   +  +   +      +   I ++  Q    +  A G++ ++   G   L+ 
Sbjct: 229 YIVIVLIFIALCIITPIVKNTQLLTVTNILNILQQASPRMFLALGVAGLILLTG-TDLSI 287

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +G  +  I+      +    +        +  ++            L      ++
Sbjct: 288 GRMVGMGMVTATIIMHNGANTG--GVFGHIFDFSSMPVVGKALFALVACIILTTVFSSIA 345

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             F         I+     + +   + +    V         P+ F+        +++  
Sbjct: 346 GFFMAKYKMHPFISTMANMLIIFGLVTYATKGVSFGAIDSAIPNMFIPTIGSFPTIIIWA 405

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 +     +T        +  N +A      ++    L AF ++    G       
Sbjct: 406 VVAIVVVWFIWNKTTFGKNLYAVGGNPEAAAVSGISVFKVTLGAFILAGILYGFGSWLEC 465

Query: 251 ASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFY 304
                     +    ++  I+  ++      GG+  +S +     I   +      +   
Sbjct: 466 NRMVGSGSAAYGQGWDMDAIAACVVGGVSFTGGIGKISGVVTGVLIFTSLTYSLTILGID 525

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +          T 
Sbjct: 526 TNLQFIFEGIIILAAVTL 543


>gi|91976067|ref|YP_568726.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91682523|gb|ABE38825.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 343

 Score = 66.8 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 48/300 (16%), Positives = 118/300 (39%), Gaps = 15/300 (5%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V   ++ +  G     +Y+  +  +IL   +FA  L +++G  G++SL     + +GAY+
Sbjct: 26  VVFWIVLIGCGLLFPSRYL--IMTEILRIGLFALSLDLILGYAGIVSLGHAAFFGVGAYA 83

Query: 81  YVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
             +L     +    L + V+ + +   G       ++       + TL ++ + + +  +
Sbjct: 84  AGLLALHGIVGEPVLALLVAGLAAAVLGFATSFLVIRGVDLTRLMVTLGIALLMEALAER 143

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           +  IT G  G+        LG               F ++    ++  + + F+   +  
Sbjct: 144 FSNITGGTDGLQGIVMQPILGL------------FEFDLFGKTGFWYSVAVLFVMFLLAR 191

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +    + R IR+N     ++   +    ++ + +++ + G+AG  FA +    S D
Sbjct: 192 RIVHSPFGLSLRAIRNNPLRASAVGIPVNRRLVAVYTLAALYAGIAGGLFAQTTQLASLD 251

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +F F  +  ++ +++LGG   L        +   + E    +   Y+   +       + 
Sbjct: 252 VFSFERSADLVLVLVLGGTGYLYGGLIGAVVFKILQEFFSTITPQYWQFWIGLVLVTIVL 311


>gi|326405078|ref|YP_004285160.1| fructose ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|325051940|dbj|BAJ82278.1| fructose ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 360

 Score = 66.8 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 87/317 (27%), Gaps = 15/317 (4%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +   L +L V       L      S   +  +  Q+ I  +     ++VV + G + L+ 
Sbjct: 45  WLAPLIVLLVSLLGFGILVGHRFFSAYALTLILQQVTITGIVGVAQALVVLTAG-IDLSV 103

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                + +         YGL   + I        A G   G+   + +     +   +  
Sbjct: 104 GAIMVLSSVLMGQCSFSYGLPAEVSILCGFAFGAAVGWCNGVLVARMKLPPFIVTLGMWQ 163

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +     +     T G A I +   L                            Y ++ M
Sbjct: 164 IVLAANYLYSGNQTIGAAQISLKAPLLQ---------YLGNTFVIGGANGATFTYGVVLM 214

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L       LR TA       + D+  A       +    +  + +S     +AG    
Sbjct: 215 IGLVLLFAYVLRHTAWGRHVYAVGDDPDAAALAGVNVRRMLIGVYTLSGVVCAIAGWALI 274

Query: 251 ASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
                ISP+  +F     + ++VI      GG  S+  +     I+              
Sbjct: 275 GRIGAISPNSGQFENINSITAVVIGGISLFGGRGSILGMIFGAMIVGVFTLGLNMYGTDP 334

Query: 306 FNSLLKFDCSFNMRHTT 322
             + L       +    
Sbjct: 335 QWTYLMIGALIIVAVAV 351


>gi|284167064|ref|YP_003405342.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511]
 gi|284016719|gb|ADB62669.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511]
          Length = 287

 Score = 66.8 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 99/303 (32%), Gaps = 28/303 (9%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +Y + A G +++ G   +L++    A  IG +S   + +  GLSIW+ +  +
Sbjct: 9   INALTLSALYALIAIGFTMIFGVADILNIAHGAAIIIGGFSAYYVYNSLGLSIWVGVLAA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            ++     + +    +K   D      ++   +   +   ++ +    +           
Sbjct: 69  LVLPALFSVAVYKLLVKPVEDDEIFVVIVTLVVLLIVEYFFRFVEGTTS----------- 117

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                 L+   R     +  +     + +       ++ L + RT I      +  +++ 
Sbjct: 118 --RSLPLLLSGRTTVGPITAQNNSILLFVISWIAIIALFLLINRTWIGRGIEGLSMSERG 175

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +        +  +A++ A              +           +   +IVILGGM 
Sbjct: 176 ASLVGVDHERTTIYTYAIAGAL--AGLGGLFFGITQGVQYNMGLEPLLTAFAIVILGGMG 233

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        I+  +  +   M       +                + LFL++++R H L
Sbjct: 234 SIKGSVIGAYIVGTLETVTITMISPRMTGMTAL-------------VVLFLILIVRPHGL 280

Query: 340 LRL 342
           +  
Sbjct: 281 MGR 283


>gi|226355325|ref|YP_002785065.1| branched-chain amino acid ABC transporter permease [Deinococcus
           deserti VCD115]
 gi|226317315|gb|ACO45311.1| putative branched-chain amino acid ABC transporter, permease
           component [Deinococcus deserti VCD115]
          Length = 296

 Score = 66.8 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 102/304 (33%), Gaps = 22/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    Y + + GL+++ G L +++      Y +GA++   LG  +GL  W  + +
Sbjct: 10  VFNGLVNGAFYALLSLGLAVIFGMLRIVNFAHGALYMLGAFTAFALGQLFGLGFWPSLII 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  GMI+    L           L+++     +             + ++     
Sbjct: 70  APLLVGLIGMIIERGLLSRLYGLEPSYNLLLTFGLTLLTQDLVK------QVMLSRFAVS 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                            F ++  +  +V++    +       + +T +    R   +N  
Sbjct: 124 SAPYTPPAELSGVVNLGFTMFPKYRLFVIVLALLVCLITWFVIEKTRVGAIIRASTENPT 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       FAV     G+AG   A                I   ++V++GGM
Sbjct: 184 VTRAFGIDVSKWVTGVFAVGVGLAGLAGVLAAPIYSV--EPYMGAELIITTFAVVVIGGM 241

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +  +  +   +     N+              L+ I + +V+L+R   
Sbjct: 242 GSILGSVVTGFAVGVLAAIGSALYPPIANT--------------LVFILMAVVLLIRPSG 287

Query: 339 LLRL 342
           L  L
Sbjct: 288 LFGL 291


>gi|17546470|ref|NP_519872.1| amino acid transmembrane transmembrane protein [Ralstonia
           solanacearum GMI1000]
 gi|17428768|emb|CAD15453.1| putative amino acid transmembrane transmembrane protein [Ralstonia
           solanacearum GMI1000]
          Length = 315

 Score = 66.8 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 113/321 (35%), Gaps = 27/321 (8%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
            + +     L+  M + GL+++   +G+L+      Y +GAY   ++        W  + 
Sbjct: 7   NLLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYVVSGYL--GFWAALI 64

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           V+ ++ GA G ++    L+    Y  +A L+ +     ++ +   +  G         L 
Sbjct: 65  VAPLLVGALGALVERFGLRTVHRYGHVAELLFTFGLAYLIEEGVKLVWG---------LP 115

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   V   +    F      +  +  +++L    +   I L L RT I    +    + 
Sbjct: 116 AVPYRVPEALDGPLFTLFTSSFPKYRAFMMLVSLLMLVGIFLLLTRTRIGLVIQAALTHP 175

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +L   +    +  F    A  G+AG         ++      +   IV  + ++GG
Sbjct: 176 DMVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NAFVTEPSMAAAVGSIVFVVAVVGG 233

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL------- 330
           M SL     A+ ++  +      ++    + L K   + N     + V  L +       
Sbjct: 234 MGSLVGAFIASLLIGCIQTFAVTLDVSVTSLLGKLGVALNPDVPLISVWNLTIAQVAPVL 293

Query: 331 -------VILMRSHSLLRLRT 344
                  +++ R   L+  R 
Sbjct: 294 PYLLLVLMLIFRPRGLMGTRE 314


>gi|27381554|ref|NP_773083.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354722|dbj|BAC51708.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 291

 Score = 66.8 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 91/305 (29%), Gaps = 20/305 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G +++ G  G+L+L+        A +     S   +  +    +
Sbjct: 7   LIDGFAISALYALGATGFTLIFGVSGVLNLSHGAIMVAAAVAAWAAASILNVGTYAGALI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++           +K   D        +    + I +    +  G     +    + 
Sbjct: 67  GVAVALLTAFATYFAVVKPIQDSRR-----IPNEEKEIFVLTGTLLWGIMIQELIAYFFT 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I         V       +  +  C + A + L + RT    A      N +
Sbjct: 122 NNAKTVLPIVEGVVEILGVRTPKNEIFTAIVCCLVIALLWLLVNRTRTGKAVLAASMNPR 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +    +  +A+     G+AG          S  +   +      SIV+LGG+
Sbjct: 182 GVTLLGLELTNINIVVWAIYGILAGIAGVLLGMFLGVSSYSVGPLT--ASAFSIVVLGGL 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+S    A  ++  +  L   +                   T   ++ L  V+ +R   
Sbjct: 240 GSVSGSLIAAFVVGYLETLTAYLVS-------------PAYRTIPALLLLVFVMYIRPQG 286

Query: 339 LLRLR 343
           LL  R
Sbjct: 287 LLGRR 291


>gi|94313401|ref|YP_586610.1| branched-chain amino acid ABC transporter permease [Cupriavidus
           metallidurans CH34]
 gi|93357253|gb|ABF11341.1| branched-chain amino acid ABC transporter, permease protein
           (inner-membrane translocator) [Cupriavidus metallidurans
           CH34]
          Length = 285

 Score = 66.8 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 54/304 (17%), Positives = 110/304 (36%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++Y + A GLSIV G L  ++      YA+GAY       ++GL  W  + +
Sbjct: 8   VINGVGIGMLYFLLAVGLSIVFGLLRFVNFAHGAFYALGAYLC-FQALQFGLDFWAALIL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I GA   +     L++         ++++      + +   +  G  G+ V      
Sbjct: 67  APIIIGALAWLTEKVMLRYVYAQPHEFHILITVGLALAVQELIIVGWGPLGVDVPPPDVL 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  +              +Y  +  +V+     L+ ++   L  T I +A R   ++ +
Sbjct: 127 QGVVMWGDF----------VYPKYRLFVIGFTALLAVALWWLLEGTRIGSAVRAGSESTE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       FA+ +    +AG   A  R              +   +V++GGM
Sbjct: 177 MVSLLGINVFRLFSLMFALGAGTAAIAGVLAAPIRGA--EPFMGVEALGVAFIVVVIGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +       ++  V  L   +              +      ++ +A+  V+L+R H 
Sbjct: 235 GSFTGALVGGLLVGIVQSLMSTL--------------WPEGARLMIYVAMAAVLLLRPHG 280

Query: 339 LLRL 342
           LL  
Sbjct: 281 LLGR 284


>gi|84687108|ref|ZP_01014990.1| probable amino-acid transmembrane abc transporter protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84664879|gb|EAQ11361.1| probable amino-acid transmembrane abc transporter protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 298

 Score = 66.8 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 60/276 (21%), Positives = 112/276 (40%), Gaps = 40/276 (14%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G+ S+      A+G+Y   IL ++ G+ I+L + +   ++ A G ++ LP  + RG + 
Sbjct: 31  AGVFSIATAGFAALGSYCVAILATKTGVPIFLTVILGTALAAAVGGLLALPLARLRGAFQ 90

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           AIATL   +I  ++L+  +  T G  GI    R                           
Sbjct: 91  AIATLAFVQIILSLLLYGEGFTGGALGIVGIPRE-------------------------V 125

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
             ++LL +  L+  ++  + R+ +   +  +R  +    SL   I    + AF +S A  
Sbjct: 126 NTWILLIVVGLTMYVMWNIGRSGMGRVFNALRQEESVASSLGVNIGKYHIIAFIISGAVG 185

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+ G   +    +I P  + F+  + V+++VILGG T+L        I+  + E+   + 
Sbjct: 186 GLFGGLQSLYTFQIEPHNYGFAFIVNVLTVVILGGRTTLLGPIMGALIMAILPEIARPLA 245

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            Y                  +  + L LVI    + 
Sbjct: 246 EY---------------RQAVNGVILILVITFLPNG 266


>gi|227823938|ref|YP_002827911.1| putative branched-chain amino acid transport system / permease
           component [Sinorhizobium fredii NGR234]
 gi|227342940|gb|ACP27158.1| putative branched-chain amino acid transport system / permease
           component [Sinorhizobium fredii NGR234]
          Length = 290

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 95/304 (31%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A G++++ G L  ++      Y +G +         GLS    I V
Sbjct: 9   IVNGIVTGSVYAIVAVGMTMIFGVLRAINFAHGEYYMLGTFGAWFAVDYLGLSYEASIIV 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +     ++G   ++      A A ++ +     +L     +  G            
Sbjct: 69  GVLSTIIVAYVVGRLVMQRMVGAPAEAGVLATLGIALVLQNTVILVFG------------ 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G    S                    +L+    +   + L +  + +  + R +  N +
Sbjct: 117 GGYKFFSGGYIEPLSVLGFSLAAQRILILVVCLLVFIGLELMVTYSRMGKSMRAVSQNVE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L  F + +A   ++G   A     +   M         + I+I+GG+
Sbjct: 177 CCEVVGIDVPKVVLHTFILGAALAALSGVLTAPVNVSVYGGM-GELITFKTLPIIIMGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++     A  IL     L        F   + F               L L+++ R + 
Sbjct: 236 GNVRGTFFAAMILGIAESLVATYVGLQFRDTVGFAT-------------LILMLMWRPYG 282

Query: 339 LLRL 342
           L   
Sbjct: 283 LFST 286


>gi|242280406|ref|YP_002992535.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638]
 gi|242123300|gb|ACS80996.1| inner-membrane translocator [Desulfovibrio salexigens DSM 2638]
          Length = 302

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/294 (14%), Positives = 89/294 (30%), Gaps = 2/294 (0%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           + + +       Y + A G ++V G L L++      + +GAY    + +     +    
Sbjct: 6   QNLLNALQWGSFYALIALGYTLVYGVLLLINFAHGDIFMVGAYIAFFVATALLGFLDFAP 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +   ++    MI+         + +A   L      +  ++    +            L
Sbjct: 66  WMVLALTVPLTMILTAGV-GVTLERIAYRPLRRKGAHRLYVVITALMCGLILENGNLALL 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                    L+    +    V        V+     +   +   + +T I  A R I  +
Sbjct: 125 GASRKKFPELLDKVVYTFGNVSVTNLKIIVIFAAIAVFLLLQFIVTKTKIGMAMRGISYD 184

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   I    +  F + S   G+AG  FA S   + P M         I+ V+ G
Sbjct: 185 KFAIPLMGIPIDNVIVFTFVLGSGMAGLAGLLFAMSYPILEPYMGALIGWKAFIAAVV-G 243

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           G+  +        +L  +      +    F  L  F     +       I    
Sbjct: 244 GIGDIRGAFIGGFLLGFIEVGVVAIFPSTFRDLFAFSILLIILWMKPTGIFGVA 297


>gi|163758355|ref|ZP_02165443.1| D-ribose transport system ATP-binding protein [Hoeflea
           phototrophica DFL-43]
 gi|162284644|gb|EDQ34927.1| D-ribose transport system ATP-binding protein [Hoeflea
           phototrophica DFL-43]
          Length = 841

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/325 (12%), Positives = 103/325 (31%), Gaps = 35/325 (10%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               V+  L++ L      +   + ++ +Q+ I  + A G +IV+ + G + L+     A
Sbjct: 521 FAAMVIVALIVALTTDRFLNPGNLSNLFLQVSIVALIAIGSTIVIFAAG-IDLSSGSMVA 579

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +    G+ + L +P+  +  G  G+++GL +   R        L     F+ 
Sbjct: 580 LLTMILAQMLKFAGIPLVLALPLILVFGGLLGLLIGLITAYGRIPSFITT-LAALIAFRG 638

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + +                               F    +   +  +Y++    F + 
Sbjct: 639 LALTFNN---------------GSPIFSLDPALEPIFYGKLLGIPLPFFYLVFFYAFAAF 683

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           ++      T +      +  N  A       +   + + F ++     +     +A  + 
Sbjct: 684 AM----NFTKLGREIYAVGGNPAAAILTGIDVKKVQTTTFVIAGFMTAVGAILMSARLNS 739

Query: 256 ISPDMFKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            SP+  +  E       +V    + GG  ++         ++ V             +L 
Sbjct: 740 GSPNYGQTLELQAIAAAVVGGASLAGGRGNILATLMGAMTIVIVQNGL---------NLN 790

Query: 311 KFDCSFNMRHTTLMVIALFLVILMR 335
               S       L+++    + + R
Sbjct: 791 AAPSSVQNIVLGLIILLAVGIDMWR 815


>gi|56420195|ref|YP_147513.1| branched-chain amino acid ABC transporter permease [Geobacillus
           kaustophilus HTA426]
 gi|261419896|ref|YP_003253578.1| inner-membrane translocator [Geobacillus sp. Y412MC61]
 gi|319766711|ref|YP_004132212.1| inner-membrane translocator [Geobacillus sp. Y412MC52]
 gi|56380037|dbj|BAD75945.1| branched-chain amino acid ABC transporter (permease) [Geobacillus
           kaustophilus HTA426]
 gi|261376353|gb|ACX79096.1| inner-membrane translocator [Geobacillus sp. Y412MC61]
 gi|317111577|gb|ADU94069.1| inner-membrane translocator [Geobacillus sp. Y412MC52]
          Length = 287

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 94/302 (31%), Gaps = 27/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GL++V G L + +      Y +G Y  +   ++ GL   L + V
Sbjct: 8   LLNGLTVGSVYSLVALGLTLVYGILHIPNFAHGALYMMGGYVTLTAMTKAGLPYGLAVVV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S    G  G++M         D   +   I +      L  +     G     +      
Sbjct: 68  SMAAVGMLGVLMERLVFYPLRDAPPLHDKIAAIGILLFLEAFAQFVWGADYQTMPTP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +   +    ++     +   + L+L++T I ++   +  N++
Sbjct: 125 ---------YGDVVSIFGLTLTVQRILIIASAVIIMILLYLFLKKTFIGSSIIAMAQNRE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        +  F +S +   +A +  +     +          +    I+ILGGM
Sbjct: 176 GANLVGINTNKVAMLTFFLSGSLAALAASLASP--INLVFPGMGHLVILKAFVIIILGGM 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL     L                   N     +    L +++ ++ + 
Sbjct: 234 GSIPGAIVGGYILGFSESLGATYVS-------------NDYKDIIAFAILVIILTVKPNG 280

Query: 339 LL 340
           L 
Sbjct: 281 LF 282


>gi|224371921|ref|YP_002606087.1| LivH5 [Desulfobacterium autotrophicum HRM2]
 gi|223694640|gb|ACN17923.1| LivH5 [Desulfobacterium autotrophicum HRM2]
          Length = 291

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 94/306 (30%), Gaps = 28/306 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL-SIWLLIP 97
           + +  +   +Y MFA GL++V G    ++ +       GAY  ++  S      I+L   
Sbjct: 9   VVNGIVAGSVYAMFAVGLTMVYGVFKFINFSHGELITWGAYLGLMFSSPPFSLPIYLAAV 68

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            +  I+   G+       +       +A LI S      +     +  G           
Sbjct: 69  PALGITVLLGLAQDWFIYRPLRQSNPVALLIASIGLSYFMRNAIRLIWGSDFQTFNLPAA 128

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                              +        ++         + L   RT +  + R   DN 
Sbjct: 129 R------------GMSFGGIYITPVQVMMVSAAVVFLTILYLLFTRTILGKSLRAASDNM 176

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +    +  ++    ++ + ++S F    G   A   +     M   +  I   + V++GG
Sbjct: 177 ELADIMGISMTRVTITVWVLASLFAATGGILLAMDTNM--DPMMGMASLIKAFAAVLIGG 234

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
             ++         +     L   +    +   + F               +F+++L+R  
Sbjct: 235 AGNVWGALLGGMFIGVAENLSVAVISPGYKDFISF-------------ALIFILLLVRPT 281

Query: 338 SLLRLR 343
            +  +R
Sbjct: 282 GIFGIR 287


>gi|209547737|ref|YP_002279654.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533493|gb|ACI53428.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 354

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 90/314 (28%), Gaps = 19/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +   +      G   S   +  +  QI I  +     ++V+ + G + L+  +  
Sbjct: 45  LIVLVLAIIIFGATIGGRFFSSYTLTLILQQIAIVGILGAAQTLVILTAG-IDLSIGVIM 103

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I A     +   YG+   + +    ++ G CG++ G      +                
Sbjct: 104 VISAVIMGNVAITYGIPTPIAVIGGLLVGGLCGLLNGFLVAYMKLPPF------------ 151

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    I      IY A+                 F  SF      +   ++ M  L 
Sbjct: 152 IVTLGTWNIVMATNFIYSANETIRDTDVDEQAPLLHLFAMSFKAGTAVLTLGVIAMVLLV 211

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L  TA       + D+ +A            L+ + +S      A         
Sbjct: 212 LVLWYVLNHTAWGRHVYAVGDDPEAAKLSGIQTKKVLLTVYTISGVIAAFAAWVSIGRNG 271

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            ISP       N+  I+  ++GG+       S+        I+  V      +       
Sbjct: 272 SISPSSAVTDYNLQAITATVIGGISLFGGRGSILGTLFGAMIVGVVSMGLNMLGADPQWK 331

Query: 309 LLKFDCSFNMRHTT 322
           +L            
Sbjct: 332 VLLTGVLIIAAVAI 345


>gi|17988446|ref|NP_541079.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Brucella melitensis bv. 1 str. 16M]
 gi|23500907|ref|NP_700347.1| branched-chain amino acid ABC transporter permease [Brucella suis
           1330]
 gi|148558557|ref|YP_001258040.1| branched-chain amino acid ABC transporter permease [Brucella ovis
           ATCC 25840]
 gi|161621236|ref|YP_001595122.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella canis ATCC 23365]
 gi|225686935|ref|YP_002734907.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella melitensis ATCC 23457]
 gi|254699314|ref|ZP_05161142.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella suis bv. 5 str. 513]
 gi|254702437|ref|ZP_05164265.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella suis bv. 3 str. 686]
 gi|256015953|ref|YP_003105962.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella microti CCM 4915]
 gi|256042921|ref|ZP_05445867.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella melitensis bv. 1 str. Rev.1]
 gi|256059753|ref|ZP_05449948.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella neotomae 5K33]
 gi|256112106|ref|ZP_05453042.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella melitensis bv. 3 str. Ether]
 gi|256261926|ref|ZP_05464458.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|260564156|ref|ZP_05834641.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260568661|ref|ZP_05839130.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|261323731|ref|ZP_05962928.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261749757|ref|ZP_05993466.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261753000|ref|ZP_05996709.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|265989355|ref|ZP_06101912.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265993545|ref|ZP_06106102.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|294853021|ref|ZP_06793693.1| branched-chain amino acid transport system permease [Brucella sp.
           NVSL 07-0026]
 gi|306845350|ref|ZP_07477925.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella sp. BO1]
 gi|17984231|gb|AAL53343.1| high-affinity branched-chain amino acid transport system permease
           protein livh [Brucella melitensis bv. 1 str. 16M]
 gi|23464578|gb|AAN34352.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella suis 1330]
 gi|148369842|gb|ABQ62714.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ovis ATCC 25840]
 gi|161338047|gb|ABX64351.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella canis ATCC 23365]
 gi|225643040|gb|ACO02953.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella melitensis ATCC 23457]
 gi|255998613|gb|ACU50300.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella microti CCM 4915]
 gi|260151799|gb|EEW86892.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260155326|gb|EEW90407.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|261299711|gb|EEY03208.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261739510|gb|EEY27436.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261742753|gb|EEY30679.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|262764415|gb|EEZ10447.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263000024|gb|EEZ12714.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263091405|gb|EEZ15941.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|294818676|gb|EFG35676.1| branched-chain amino acid transport system permease [Brucella sp.
           NVSL 07-0026]
 gi|306274266|gb|EFM56078.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella sp. BO1]
 gi|326411364|gb|ADZ68428.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella melitensis M28]
 gi|326554654|gb|ADZ89293.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella melitensis M5-90]
          Length = 287

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 95/303 (31%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A GL++V G L +++L       +G Y   ++ + +G+  ++ +  
Sbjct: 8   VINGILLGGLYAIMAQGLALVWGVLNIVNLAHGTMIMLGGYVTWLVFANFGIDPFIGVFA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A +    G  +    L           L+++   + I               +      
Sbjct: 68  AAAVMFCFGYALQRCVLNLVARGPMFNALLITFGIEIIFTDVAQHVFSADFRAIIPSYSA 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +            F    +   +      +    +S  +  ++  T +  A R    N  
Sbjct: 128 VN-----------FNVYGITIPLMNLLAFIAAFVVSGFMFFFMMTTKLGRAIRATAQNLT 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A               F +  A  G+AG  +A                    +I I+GG+
Sbjct: 177 AARLYGVEPRHLYAVTFGIGVAIAGVAGGLYATVNQL--NPYIGVPLTAKSFAITIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +   +     IL  +  L        + +++ F               L LV+++R   
Sbjct: 235 DNPLGVILGGLILGVIESLTVLYLGDTYRNVVSFS-------------ILVLVLIIRPGG 281

Query: 339 LLR 341
           LL 
Sbjct: 282 LLG 284


>gi|121605842|ref|YP_983171.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120594811|gb|ABM38250.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 315

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 98/301 (32%), Gaps = 21/301 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL+++ G +G+++L     Y IGAY    L      +       +
Sbjct: 33  LNALQYGLLLFLVASGLTLIFGIMGVINLAHGSFYMIGAYMAYALAPVVASTFGGGFFAT 92

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             +     +++G             + L   E  Q +L+ +  I   +    +       
Sbjct: 93  LAVGVVLAVLLGYVLEW-----AFFSFLYEREHLQQVLMTYGLILVFEELRSLLVGDEVH 147

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G  V + +         + Y ++  +V      L+  + L   RT +    R    N++ 
Sbjct: 148 GVEVPAFLAGTLPLGELMTYPVYRLFVSGVCLVLALGMYLVFTRTRLGMMIRAGSTNREM 207

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             SL   I F     FA       +AG   A             S  II   IV++GG+ 
Sbjct: 208 VQSLGIDIKFLYRVVFAAGLGVAVLAGMVAAPVSSV--YPGMGDSVLIICFVIVVIGGIG 265

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  ++  V                            L+ + + L++L +   L
Sbjct: 266 SIRGALLAALLIGFVDTFGKVF--------------LPQAAGVLVYVLMALILLWKPDGL 311

Query: 340 L 340
            
Sbjct: 312 F 312


>gi|317126277|ref|YP_004100389.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Intrasporangium calvum DSM 43043]
 gi|315590365|gb|ADU49662.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Intrasporangium calvum DSM 43043]
          Length = 300

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 86/305 (28%), Gaps = 17/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G S+V G + LL+      Y +GA+    L +    ++     V
Sbjct: 8   VLNGLFVGSFYGLVALGYSMVYGIIKLLNFAHGDVYMVGAFGGYTLLTFGAGALGGGSLV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++     M+M                     +   I                      
Sbjct: 68  ALVVILVVAMVMTGTLGLVLERIAYRPLRGAPRLSVLITAVGASFALEYGIAVAYGPNPR 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +                     +    ++     L  ++   +RRT    A R I  + K
Sbjct: 128 VYPVGFGNA---SVTILGARLTVAQLLMMAVAVGLMIALDQLVRRTRTGRAMRAISQDPK 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       F + SA  G AG    A   ++   M  F   +   +  ++GG+
Sbjct: 185 ACLLMGINVDNVISRTFFIGSALAGAAGVMAGAYYGKVDFLM-GFIIGLKAFTAAVIGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L  +           +  +  F               L L + +R   
Sbjct: 244 GNLRGAVLGAIVLGLLESFGTAFLGAQWRDVFAFAF-------------LILFLTVRPTG 290

Query: 339 LLRLR 343
           LL  R
Sbjct: 291 LLGER 295


>gi|171186249|ref|YP_001795168.1| inner-membrane translocator [Thermoproteus neutrophilus V24Sta]
 gi|170935461|gb|ACB40722.1| inner-membrane translocator [Thermoproteus neutrophilus V24Sta]
          Length = 323

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 51/332 (15%), Positives = 112/332 (33%), Gaps = 12/332 (3%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
           +I     +V  L +     A  + +      +   I  + + GL++   +  + +     
Sbjct: 3   RIALFWLIVAALAVGWAASAAYAPRLAVEGVMYSSILALASVGLTMTYQTTKVPNFAHGA 62

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
              IG  + + L  R+GLS +L    +   +    + +    +       +   L+M+ +
Sbjct: 63  VMGIGILAALALSQRFGLSPYLAGLAALPFAVVASVALYYTLMPIYRRGSSPIILMMASM 122

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             NI++              AD L                  S    +         +  
Sbjct: 123 AYNIILLGAL-------NATADYLGRAWGVFTRSYTLRGADFSIGDVQGLAVVGSSMVAA 175

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +S  + L+L +T +  A R   +N++   SL   +  A L+A+A++ A  G +G+     
Sbjct: 176 VSIVMYLFLTKTKLGVALRAAVENEELARSLGINVDRAYLAAWAIAGALAGYSGSLLTLY 235

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
                     +     + +  I GG+ S+        ++  V      +  Y   ++   
Sbjct: 236 LTV--EPDTGWMMLAGIFAASIAGGLNSVFGAVLGAYLMGFVE---VPLATYAAYAVAVE 290

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                     L +IA+ + +++    L  LR 
Sbjct: 291 PYQLLQYRPLLPLIAVAVFLIVIPQGLTSLRK 322


>gi|153004041|ref|YP_001378366.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5]
 gi|152027614|gb|ABS25382.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5]
          Length = 286

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 95/304 (31%), Gaps = 27/304 (8%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
              +     ++  + A GL+ + G  G+L+      + +GAY+  +  +R+  S W+ + 
Sbjct: 7   NALNGLSWGMLLFLIAMGLTTIFGVAGVLNFAHGALFMLGAYAC-MQLARWTGSFWVGLA 65

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            + +     G  +    L+      A   L+++     +L     +  G     V     
Sbjct: 66  TAPIAVAVLGGAIEAGLLRPVYGRDASHQLLLTFAVLLVLEDGIRLLWGPGYHVVEPPAL 125

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
             GT           P +   + ++  +++     + A +    R T      R    ++
Sbjct: 126 LAGT----------VPIAGYSFPVYRLFLVALGPLVGAGLWSLFRFTRFGKIVRAAASDR 175

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +    +   +       F   +A   + GA  A  +             I    +V++GG
Sbjct: 176 EMAAGVGIRVPRLFTGVFVFGTALAALGGALAAPHQSV--GPAMGERIIIESFIVVVVGG 233

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S         +L  +      +                     +  + L  V+++R  
Sbjct: 234 LGSFPGAFVGALLLGLLEAFGTQV--------------LPRAQMAIPYLLLTAVLVVRPR 279

Query: 338 SLLR 341
            L  
Sbjct: 280 GLFG 283


>gi|163739541|ref|ZP_02146951.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis BS107]
 gi|161387294|gb|EDQ11653.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis BS107]
          Length = 288

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 97/303 (32%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      +Y + A G  ++  +   ++        +GA+  + L +   L +   +  
Sbjct: 4   LVSGLANGCVYGLIALGFVLIYKATEAVNFAQGDFMMLGAFVTLGLTNAEYLHLPFWLAA 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              I+   G+   L  +  R          +    Q  ++            +       
Sbjct: 64  PLSIAIMAGLGYLLDLVILRH---------LFGQNQTAVVILTIALGFVIRFFAGAIWGH 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+ S +       + V+  +    +++    L+ S+  + +RT +  A +    NQ 
Sbjct: 115 EPQTLESPLALGDVQLAGVVLGLADLAIIIVTVLLTWSLYQFFQRTKLGLAMQAASQNQM 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A + +   +   +   + +S A   +AG  FA+     + D       I   +  ++GG 
Sbjct: 175 AAYFMGIPVKRVQGLIWGLSGATAAVAGILFASK---GAIDPNAGLLGIKAFAAAVIGGF 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        I+  +           ++ +                + L  V++ R H 
Sbjct: 232 GSLPGALAGGLIVGVIEPFAARYLAAGYSQIAP-------------YVLLLAVLVFRPHG 278

Query: 339 LLR 341
           L  
Sbjct: 279 LFS 281


>gi|148255133|ref|YP_001239718.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. BTAi1]
 gi|146407306|gb|ABQ35812.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 290

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 51/307 (16%), Positives = 106/307 (34%), Gaps = 27/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      + V+ A GL+IV G LG+++      + IGAY+  +  +    S W  + +
Sbjct: 10  LFSGIALGAVLVITALGLTIVFGMLGVVNFAHGALFMIGAYA-GLYLASLTGSFWWGLLL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ GA GM++    ++          L+++     IL++   I  G  GI        
Sbjct: 69  APLLVGAFGMLIERVLVRRLYGRSVDDPLLLTFGLSYILVEGVRIVFGSDGIPFPTPSQL 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G               F  +  +  +V+  +  +  ++ L L +T +    R    + +
Sbjct: 129 IGV----------VDLGFGFFPKYRLFVIALVAVVLLALWLMLEKTRVGLIVRAGARDPQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   I    L+ F +      + G      R                  + ++GG+
Sbjct: 179 IMRVLGVDIGRVWLAIFGLGVGLAALGGVLAGPMRSV--NPEMGTLVLAEAFVVTVIGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++   + +                       T +M   +  V+L+R   
Sbjct: 237 GSIVGAVVAGLMVGVCISMVALFA--------------PEMATIVMFALMAAVLLVRPQG 282

Query: 339 LLRLRTP 345
           L  L+  
Sbjct: 283 LFGLKGR 289


>gi|154244596|ref|YP_001415554.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154158681|gb|ABS65897.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 290

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 94/307 (30%), Gaps = 26/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +    Y +   GL+++ G + +++      Y  G Y+  +     GL+ ++ +PV
Sbjct: 8   ILNALVLGGTYALLGIGLTLIFGIMNVVNFTHGALYTFGGYAMYLAAVALGLNFFVALPV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G  +    L+         T+++      I+        G     V      
Sbjct: 68  ALVAGLLLGAFIEFTLLRPLRRSDIDTTMLVMIGAGIIMQSGTLWIFGGVAKAVPTPFP- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V       +VL     L A     +  T +  A R    +  
Sbjct: 127 ----------AQPLVIGPVSLSYVNLFVLAAAVALIAITYFTINGTRLGRAMRATFQDHD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +     + FA+ SA    AGA        +          +   +IVILGG+
Sbjct: 177 TAALMGVNVSLIYTATFAIGSALAAAAGALLGPV--YVVTPQMGELAAVKAFAIVILGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+S       IL    EL  G     +   + F             + +  V+L++   
Sbjct: 235 GSISGATIGGFILAFAEELGAGYISSGYRDAMGF-------------LIIIAVLLVKPTG 281

Query: 339 LLRLRTP 345
           L      
Sbjct: 282 LFARAER 288


>gi|121583467|ref|YP_973898.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120596721|gb|ABM40156.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
          Length = 287

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 47/302 (15%), Positives = 100/302 (33%), Gaps = 26/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M A GL+++ G + +++L     Y +GAY      S    S+ L I V
Sbjct: 10  LLNSVQYGLLLFMLAAGLTLIFGIMDVVNLAHGSFYMLGAYL-AYSLSGAFDSLLLAILV 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++S   G+ +     +   D   +  ++++     I  + + I  G            
Sbjct: 69  GTILSVLFGLALERLLFRHFYDRDHLDQVLLTFGLIYIFEELRSILWGDDVHGAKIPDLL 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +   +             Y ++  ++      L+  + L + +T +    R    N++
Sbjct: 129 SASIPLTETM---------SYPVYRLFMSGVCIVLAIGLYLLISKTRLGMKIRAGAFNRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL   I     + FA+      +AG   A                I    +V++GG+
Sbjct: 180 MTESLGINIKLIHGAVFALGVGLAAIAGMIAAPISSV--YPNMGSQVLITCFVVVVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++  V      +                     L+ I +  V+L +   
Sbjct: 238 GSVRGALIAALLVGLVDTFGKVLLPQVAG--------------MLVYILMAAVLLWKPEG 283

Query: 339 LL 340
           + 
Sbjct: 284 MF 285


>gi|319782325|ref|YP_004141801.1| ABC transporter [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317168213|gb|ADV11751.1| ABC transporter related protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 847

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/319 (9%), Positives = 83/319 (26%), Gaps = 27/319 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + + +L  + +V   +         S   + S+  Q  +  + ++ ++ V+     + 
Sbjct: 10  LRRNEPVLIAVLLVAIAVFGWIDPRFLSTGNLVSIAQQSAVIALISFAMTAVI-IARGID 68

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++     A    +  +               +   +G+  + +           L    L
Sbjct: 69  ISVGSNLACSGIAAGL---------------AYTATGSASLSLLAAIGGGAAIGLLNGAL 113

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I        +     +   +           +      L+   R     +   + +  + 
Sbjct: 114 IGFAGISPFIATLATMAFARGLALSLSGASSIAVADPVLLFAGRETIGLLPVSVIIAAIC 173

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L + +          RT        I  N  A  +    +   ++S + ++ A  G+   
Sbjct: 174 LSLWWFVL------NRTVYGRWIYAIGGNAGAARASLVPVDLVRISVYLIAGATAGLGAI 227

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
                     P      E   + + +I      GG  S+   A    +L  +      + 
Sbjct: 228 LTIGRLGSAQPLAGTGLEFTAITAAIIGGTKLSGGQGSIWGTAIGALLLGVINTGLSFLQ 287

Query: 303 FYYFNSLLKFDCSFNMRHT 321
                          +   
Sbjct: 288 VPQILIYFVTASLILVAVL 306


>gi|171060264|ref|YP_001792613.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
 gi|170777709|gb|ACB35848.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
          Length = 294

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 101/315 (32%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              + +      +    I    Y + + GL+++ G L +++ +    Y +GA+  ++  +
Sbjct: 3   LFGIPSKALFGQLLLGLINGSFYAVLSLGLAVIFGLLNIINFSHGALYMVGAFVALLGLN 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+S W  + V+  + GA GM++    LK       +  L+++     I         G
Sbjct: 63  HLGMSYWTALLVAPALVGALGMLIERTMLKHLYKLDHLYGLLLTFGLALIGEGLFRYYFG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G                          F+   ++  +V+L    +  +    + RT++
Sbjct: 123 VSGESYPVP----------EQLQGGVDLGFIFLPLYRGWVVLASLAVCTATWYLIERTSL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R          +L   +       +    A    AG   A         +   +  
Sbjct: 173 GATLRAATQRPDLVQALGINVPLMVTLTYGAGVALAAFAGVLAAPVIQV--NPVMGSNLI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S++        L  +  L   +       ++                
Sbjct: 231 IVVFAVVVIGGMGSIAGSIITGLGLGVIEGLTKVIYPEASAVVIFVIMIVV--------- 281

Query: 327 ALFLVILMRSHSLLR 341
                +L R   L  
Sbjct: 282 -----LLFRPAGLFG 291


>gi|158423734|ref|YP_001525026.1| branched-chain amino acid ABC transporter permease protein
           [Azorhizobium caulinodans ORS 571]
 gi|158330623|dbj|BAF88108.1| branched-chain amino acid ABC transporter permease protein
           [Azorhizobium caulinodans ORS 571]
          Length = 291

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 89/287 (31%), Gaps = 13/287 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +   IY + A GL++V G L +++        +  ++  I  S +GL  +L IPV 
Sbjct: 13  VNGLLTGAIYALVALGLTLVYGVLHIINFAHGAFLTLAMFAVWIAFSVFGLDPYLAIPVL 72

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           A++  A G       +           L+++     +L                      
Sbjct: 73  ALLFFAVGYGTQRYVIGPASHGDDGNILLVTLGLSIVLENVLLALFRAD----------- 121

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
             T+ +   F  F    ++      Y  L    ++  + L L RT    A R +   +  
Sbjct: 122 TRTIATDYAFDVFEVGPMLISRARLYGFLAAMVVAVLLWLLLARTDTGKAIRAVAKEKLG 181

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +       F +  A + +A                  +  ++  +IV+LGGM 
Sbjct: 182 ASLVGINVKHIFAVTFGIGCATLAIAACLLMPIFYV--NPRVGQAFVLVAFTIVVLGGMG 239

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           S+         +  V  L           +  F     +       +
Sbjct: 240 SIPGAVIGGLFIGVVESLTGLFLGDSLGQIGIFLIFILVLLLRPSGL 286


>gi|239905845|ref|YP_002952584.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
 gi|239795709|dbj|BAH74698.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
          Length = 307

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 50/313 (15%), Positives = 97/313 (30%), Gaps = 17/313 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           + I +       Y + A G  +V G L L++      + +GAY              +  
Sbjct: 7   QNILNALQWGSFYSLIALGYCLVYGVLLLINFAHGDIFMVGAYIAFYCCMFLLGKFGVFA 66

Query: 97  P---VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
                  +       ++    +    + +A   L    + +  ++    +          
Sbjct: 67  GLPGWMVLAVAVPLTMVLTAVVGVTLERIAYRPLRRKGVNRLYVVITALMCGLILENGNL 126

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             L     +  +L+    F    V        V+         +   + RT I  A R I
Sbjct: 127 ALLGASRKSFPTLVPVKVFEVFGVTVTNIKLMVIGVAILSFLLLHFIVTRTKIGMAMRAI 186

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             ++ A   +        +  F + S F G+AG FFA +   I P M         I+ V
Sbjct: 187 SYDRFAVPLMGIPADTVIVFTFVLGSGFAGLAGLFFAMTYPVIDPYMGALIGWKAFIAAV 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           + GG+ S++       +L  V  +        +  L+ F               L L++ 
Sbjct: 247 V-GGIGSIAGAFAGGFLLGFVEIMVVAFFPSTYRDLIAFS-------------ILLLILS 292

Query: 334 MRSHSLLRLRTPS 346
           +R   L  +   +
Sbjct: 293 IRPTGLFGVARRT 305


>gi|149909310|ref|ZP_01897966.1| ribose ABC transporter, permease protein [Moritella sp. PE36]
 gi|149807627|gb|EDM67575.1| ribose ABC transporter, permease protein [Moritella sp. PE36]
          Length = 342

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/312 (8%), Positives = 81/312 (25%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++  +++        +   I ++  Q  +  + A G+++V+   G + L      A
Sbjct: 44  LIALILLIVVVSFLNPHFFTMGNILNILRQTSVSAIIAVGMTLVI-LTGGIDLGVGSVLA 102

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +     +  +       +    M   + +            +   + F  
Sbjct: 103 LCGAFAASLIAMEVSVMIAVPVALFAGAALGAMSGMIIA------------IGKVQAFIA 150

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T V     +        +       V++       
Sbjct: 151 TLVTMTLLRGVTMVYTDGRPISTGFTDVADSFSWIGTGYLLGVPVPVWLMVIVFASVWYL 210

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 211 L-----NHTRFGRYVYALGGNEAATRLSGINVDKVKIGVYAICGVLAALAGLIVTSRLSS 265

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+      GG   +        I+  +      ++   +  ++
Sbjct: 266 AQPTAGMGYELDAIAAVVVGGTSLAGGKGRIMGTLIGALIIGFLNNALNLLDVSSYFQMI 325

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 326 AKAVVILLAVLV 337


>gi|146276291|ref|YP_001166450.1| monosaccharide-transporting ATPase [Rhodobacter sphaeroides ATCC
           17025]
 gi|145554532|gb|ABP69145.1| Monosaccharide-transporting ATPase [Rhodobacter sphaeroides ATCC
           17025]
          Length = 363

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 90/313 (28%), Gaps = 11/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L V   +   L      S   +  +  Q+ I  +     ++VV + G + L+     
Sbjct: 48  LIVLVVSISIFGALLGQKFFSAFTLTLILQQVAIVGIVGAAQTLVVLTAG-IDLSVGAIM 106

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +        RYG+   L +     +  A G + G    + +     +    +     
Sbjct: 107 VLSSVVMGQFTFRYGIPAPLSVLCGLGVGAAIGFVNGTLVARMKLPPFIVT---LGMWQI 163

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +   +    N             +     S  R     +          Y  + +  L 
Sbjct: 164 VLAANFLYSRNETIRSQDIAAEAQILQFFGSTFRIGADEAGRG--GAVFTYGAVLLIVLV 221

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I   LR+TA       + D+ +A            ++ + +S     +AG        
Sbjct: 222 LLIAYVLRQTAWGRHVYAVGDDPEAAELAGVQTKTVLVTVYTLSGLICALAGWVMIGRLG 281

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   +F+    + ++VI      GG  S+  +     I+         M      + 
Sbjct: 282 SVSPTAGQFANIESITAVVIGGISLFGGRGSVLGMLFGALIVGVFSLGLKLMGTDPQWTY 341

Query: 310 LKFDCSFNMRHTT 322
           L            
Sbjct: 342 LLIGILIIAAVAV 354


>gi|148256979|ref|YP_001241564.1| hypothetical protein BBta_5705 [Bradyrhizobium sp. BTAi1]
 gi|146409152|gb|ABQ37658.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 345

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 50/287 (17%), Positives = 117/287 (40%), Gaps = 15/287 (5%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
               ++ L +G     +Y+  +  +IL   +FA  L +++G  G++SL     + +GAY 
Sbjct: 24  FAFWIVVLAVGLAFPSRYL--IMTEILRLALFALSLDLILGYAGIVSLGHAAFFGVGAYC 81

Query: 81  YVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
             +L          L + V+ + +   G       ++       + TL ++ + + +  +
Sbjct: 82  AGLLSVHGLINEPVLALIVAGLAATVLGFATSFLVIRGADLTRLMVTLGIALLMEALAER 141

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           +  IT G  G+   D     G              +F ++    ++  L + F+   +  
Sbjct: 142 FSNITGGTDGLQGIDIQPIFGV------------FAFDMFGKTGFFYALAVLFVLFLLAR 189

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +    + R I++N     ++   +    ++ + V++ + G+AGA F  +    S D
Sbjct: 190 MIVHSPFGLSLRAIKNNPLRAAAIGIPVNKRLIAIYTVAAFYAGIAGALFTQTTALASLD 249

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +F F  +  ++ ++++GG   L       A+   + EL   +   Y+
Sbjct: 250 VFSFERSADLVLMLVIGGSGYLYGGLIGAAVFRMLQELFQWITPQYW 296


>gi|254244243|ref|ZP_04937565.1| hypothetical protein PA2G_05093 [Pseudomonas aeruginosa 2192]
 gi|126197621|gb|EAZ61684.1| hypothetical protein PA2G_05093 [Pseudomonas aeruginosa 2192]
          Length = 317

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 83/288 (28%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++   +       + +  +++      +       
Sbjct: 44  ITYGLLGVINMAHGEMLMLGAYSTYVVQLLFQRLAPEWLALYPLLALPVAFCVSAAIGMA 103

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      +     + +         +
Sbjct: 104 LER--TVIRHLYGRPLETLLATWGISLVLIQLVRMLFGAQNVEVANPAWLSGGIQVLPNL 161

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L RT +    R +  N+              + AF +
Sbjct: 162 VLPWNRIVIIGFALFVLLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVPTGRVDMLAFGL 221

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+             I    +V+LGG+  L+    A   L    ++
Sbjct: 222 GSGIAGLGGV--ALSQVGNVGPDLGQGYIIDSFLVVVLGGVGQLAGSVLAAFGLGVANKI 279

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                    L++  + L I  R   L  L+  
Sbjct: 280 LEPQIGAVLGK-------------ILILALIVLFIQKRPQGLFALKGR 314


>gi|5139507|emb|CAB45539.1| unnamed protein product [Synechococcus elongatus PCC 6301]
          Length = 269

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 82/268 (30%), Gaps = 13/268 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +  + A GL+++ G L L +        +GAY  ++  S        +   +
Sbjct: 14  INGLATGSLLALAATGLTLIYGILRLTNFAQGEFLTLGAYFTLVANSLGLSLWLAIPLGA 73

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                 C +   +     R   +   TLI+  I  ++ ++   I    AG          
Sbjct: 74  IATIALCLLGEAVLWEPLRRQRVNTTTLIILTIGLSLFLRNLVILIWGAGNQAYRLAVQP 133

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
             T+             +   +    V++G       +   L+RT+I    R I D+   
Sbjct: 134 ALTLWG-----------LRITLNSLLVVIGAAAALVLLHWVLQRTSIGKGMRAIADDPDL 182

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                  +       + ++     +AG  +             ++  + + +  ILGG+ 
Sbjct: 183 ARVSGVPVETVIRWTWVIAGGLTAIAGGLYG--LITAVRPTMGWNLILPLFASAILGGIG 240

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFN 307
           S         IL    EL        + 
Sbjct: 241 SPYGAIAGGLILGFAQELSTYWLPAEYK 268


>gi|72384238|ref|YP_293592.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72123581|gb|AAZ65735.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 295

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 107/318 (33%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           ++  L +        +    +    Y + + GL+++ G L +++      + +GA+    
Sbjct: 1   MITILGVPLQGLLGQLVLGLVNGSFYAILSLGLAVIFGMLNIINFAHGALFMVGAFVAWA 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
                G+S W  +  +  + G  G+ +    L++      +  L+++     I+      
Sbjct: 61  GLEYLGISYWWSLLAAPALVGLAGIAIERGLLRWLYKLDHLYGLLLTFGLALIIEGLFRF 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G +G   +      G               F+    +  +V+     +       + +
Sbjct: 121 QFGVSGQPYSIPDEVAGA----------INLGFMSLPKYRAWVIGASLTVCLVTWFTIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N     +    +    +  +A      G+AG   A +       +   
Sbjct: 171 TRLGAYLRAATENPSITQAFGVNVPVMVMLTYAFGVGLAGLAGVLAAPTGQL--SPLMGS 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  I+V ++V++GGM S+     A   L  V  L                  +     T+
Sbjct: 229 NLIIVVFAVVVIGGMGSILGAIVAGLGLGVVEGLTKVF--------------YPEASATV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           + + + +V+++R   L  
Sbjct: 275 VFVIMVIVLMVRPAGLFG 292


>gi|294102415|ref|YP_003554273.1| inner-membrane translocator [Aminobacterium colombiense DSM 12261]
 gi|293617395|gb|ADE57549.1| inner-membrane translocator [Aminobacterium colombiense DSM 12261]
          Length = 297

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 95/305 (31%), Gaps = 22/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++      + +GAY      S   L   + + +
Sbjct: 10  LFNAITLGSLYGLIAIGYTMVYGILRLINFAHGDIFMLGAYFVFFSVSLAKLPWGIAVAL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++S  CG+++   + +   +   I+ LI +      +     +        V    + 
Sbjct: 70  AVILSTFCGILVDRIAYRPLRNAPRISALISAIGVSFFIENLGLVVFTGLPRPVVQPAWL 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +               S V        V +    L   ++  + +T    A R I  + +
Sbjct: 130 VKI----------IKVSGVRILPLAIVVPVVTFSLVLGLLWIVYKTKPGLAMRAISKDIE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +  ++       FA+ SA    +G  +A    +I P M             + GG+
Sbjct: 180 TTRLMGVSVDKVIALTFALGSALAAASGIMWALRYPQIHPFM-GVIPGFKAFIAAVFGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL  +  +              F     +    +           R   
Sbjct: 239 GSIQGAVLGGMILGIIEIMVVAFFPALSGYRDAFAFILLIVILLI-----------RPTG 287

Query: 339 LLRLR 343
           L+  +
Sbjct: 288 LMGEK 292


>gi|260574706|ref|ZP_05842709.1| inner-membrane translocator [Rhodobacter sp. SW2]
 gi|259023123|gb|EEW26416.1| inner-membrane translocator [Rhodobacter sp. SW2]
          Length = 337

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/334 (9%), Positives = 87/334 (26%), Gaps = 19/334 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L                      + A G++++ G L   +       A+G    ++   
Sbjct: 4   ILNALVVFLNFVFVPGLAYGAQLALGALGVTLIYGILRFSNFAHGDTMAMGTMVTILFTW 63

Query: 87  RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            +              L +P    I+ A  +       +F     A  T+++      + 
Sbjct: 64  WFQSMGISFGPLPTALLALPFGIAITAAFVLGTDRVVYRFYRKQKAAPTILVIVSLGVMF 123

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +    +                     +  +        +  +      ++    + A++
Sbjct: 124 VMNGIVRLIIGVGDQEFADGARFMVTAAGFKKATGLDEGLAIKATQGITVITAVLVVAAL 183

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L++T    + R   DN+                 + +++A   +AG  +   +    
Sbjct: 184 FWFLQKTRTGKSMRAFSDNEDLALLSGINPDRVVAVTWVIAAALATIAGVLYGLDKSF-- 241

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309
                F   + + +  I+GG+ +         ++             +   +        
Sbjct: 242 KPFTYFQLLLPIFAAAIVGGLGNPLGAIAGGFVIAFSEVTVTYAWKKVVTYVVPDRMAPD 301

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                        +    L LV+L     L + +
Sbjct: 302 TLLQLLSTDYKFAVSFSILILVLLFMPTGLFKGK 335


>gi|258541261|ref|YP_003186694.1| urea ABC transporter permease [Acetobacter pasteurianus IFO
           3283-01]
 gi|256632339|dbj|BAH98314.1| amide-urea transporter permease protein [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256635396|dbj|BAI01365.1| amide-urea transporter permease protein [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256638451|dbj|BAI04413.1| amide-urea transporter permease protein [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256641505|dbj|BAI07460.1| amide-urea transporter permease protein [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256644560|dbj|BAI10508.1| amide-urea transporter permease protein [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256647615|dbj|BAI13556.1| amide-urea transporter permease protein [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256650668|dbj|BAI16602.1| amide-urea transporter permease protein [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256653659|dbj|BAI19586.1| amide-urea transporter permease protein [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 308

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 92/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   ++++ A GL+IV G +G++++       +GAY+  +    +   +  L  +   I
Sbjct: 22  LILFSVFLLMALGLAIVFGQMGVINMAHGEFMILGAYTTYVCSYIFAQWMPALFGLYFFI 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     I+      F    L     +       +L  W      +           +G T
Sbjct: 82  AVILAFIVAGTVGMFLEWSL--IRFLYKRPLDTLLATWGVSLILQQIFRSTFGAREVGVT 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +      S  +   I    V+     ++  I   L ++      R +  N+     
Sbjct: 140 LPDWMMGSWNLSETIQIPINGMIVIAITLLITIVIYGLLYKSGWGKQVRAVMQNRTMAGD 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           F +     G+AGA F       +         +    +V  GG  SL 
Sbjct: 200 VGINTERVDRFTFGLGCGVAGVAGAAFTMIGS--TSPTAGQQYIVDTFLVVAFGGTESLG 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     +                         L+++ +  ++++R   L  L
Sbjct: 258 GTIASAFSISQARSILEFFLS-------------GSMAQVLVLLTVIGILMLRPQGLFAL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|76802351|ref|YP_327359.1| branched-chain/neutral amino acids ABC transporter permease I
           [Natronomonas pharaonis DSM 2160]
 gi|76558216|emb|CAI49804.1| ABC-type transport system permease protein (probable substrates
           branched-chain/neutral amino acids) I 4 [Natronomonas
           pharaonis DSM 2160]
          Length = 304

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 93/304 (30%), Gaps = 16/304 (5%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +      +    + GL++V G L LL++     + +G Y  V   +        L  +  
Sbjct: 14  NGLYFAALLFFASVGLTLVFGVLNLLNMAHAAFFGLGVYIGVWTLNNMHDISTSLAVLLV 73

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +I  A  +++ + +        A    I              +               + 
Sbjct: 74  LIVIAIPVVVSVLAGALDKTLFAPLYDIEPVYQLLATFGVLLMIEDLIKFIWGTTPIAVD 133

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
           + V    +   F        ++  +++L     +  + L   RT +      + ++ +  
Sbjct: 134 SAVNPSRQLGSFEVLGSSLSMYRTFIVLMFIVTAVGLFLMFERTKLGKISLAMAEDYEMV 193

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             L   +   ++  F++S     + GA F                 ++  +++++GG+ S
Sbjct: 194 QMLGINVNRVRVLIFSISVGLAALGGALFVPLAPA--TPAITLEYVLLSFAVIVIGGLGS 251

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L     A+ I+  V                            ++ + +  VI+++   L 
Sbjct: 252 LKGAIVASLIIGLVRSFGITY--------------VPQIELAIVFLLMAAVIIVKPEGLF 297

Query: 341 RLRT 344
               
Sbjct: 298 GHEE 301


>gi|329917432|ref|ZP_08276482.1| ABC-type transporter, permease component: HAAT family
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327544543|gb|EGF30048.1| ABC-type transporter, permease component: HAAT family
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 304

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 92/305 (30%), Gaps = 13/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +  L+Y + A G  ++  + G+ +          A + V+     GL +W  I  
Sbjct: 8   LLSGMLTGLMYSLVALGFVLIYKASGVFNFAQGAMVYFAALA-VVGLMDKGLPMWAAIIG 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +    G+      L+   +   I   + +      L    P+  G     +   +  
Sbjct: 67  AFAVMLLVGLSTERFVLRKLVNQPPITLFMATIGLTFFLEGLGPLLFGSEVRPINLGIVD 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +     +  ++         + L+ ++T I  A R + D+ +
Sbjct: 127 EPIQSIMDNYGIGISKFDLFASGMVIVLV-------TLLALFFQKTKIGRALRAVADDHQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL   +       + V+      AG  + +               +  + ++ILGG 
Sbjct: 180 AALSLGIPLQHIWAIVWGVAGFVALAAGLLWGSRNGVQFALTMT---ALKALPVLILGGF 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+    +L               +          +   L   +L+R   
Sbjct: 237 TSVPGAIVGGLIIGASEKLAEIYIPPVMQETFGGNFGGIEGWFPYVFALL--FLLVRPSG 294

Query: 339 LLRLR 343
           L   +
Sbjct: 295 LFGEK 299


>gi|315124508|ref|YP_004066512.1| branched-chain amino-acid ABC transport system permease protein
           [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|315018230|gb|ADT66323.1| branched-chain amino-acid ABC transport system permease protein
           [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 268

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 70/234 (29%), Gaps = 10/234 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++        +GAY+ +   +   +     + +
Sbjct: 10  LVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDIMMVGAYAALFCMTNLNVPFLGALSL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+     + K       I+ LI +      L     +               
Sbjct: 70  AMIFAACVGIATDRIAYKPLRQAPRISLLITAIGISFFLQNLFNMLFTSTPRTFTPP--- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             VI       V      +  +++  L ++    A R +  + +
Sbjct: 127 -------SYFEESVNFGGVITTYGSLMVPALTFVILIAVLWILYKSKYGIAIRALAFDIQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
               +           FA+ SA   + G F+AA+   + P M            
Sbjct: 180 TVNLMGIDANRIIAIVFALGSALAAVGGVFWAANYYSVEPTMGTLIGLKAFACC 233


>gi|296161885|ref|ZP_06844686.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295887904|gb|EFG67721.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 357

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 57/325 (17%), Positives = 108/325 (33%), Gaps = 27/325 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           LL     +             ++ S     L+  + A    ++ G  G+L+L       +
Sbjct: 26  LLMWSVAVAAMAVGPFFVGP-WLLSTVRDALVMGILALSYDLLWGRAGVLTLGHTTFLGL 84

Query: 77  GAYSYVILGSRYGLSIW--LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           GAY + I   ++G +    L   V    + A  +   L     R  + AI +L +  + Q
Sbjct: 85  GAYGFAITTVQFGQASVTGLAAGVVCAAAVAAVIGYFLLFAGVRLHFFAIISLAVLIVAQ 144

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + + W+ +T G  GI     L F               +  +      +Y +  +   +
Sbjct: 145 QLAVSWQSVTGGDTGILGIPGLSFSV----------GSHTFDMSGPRASWYTVAVVLLAA 194

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +I  + R+        I  N+    +      F  L  F  S+A   +AGA  AA   
Sbjct: 195 TGLIWLVCRSRYGKVLDAIATNEWRAKACGYHTSFHLLLVFVASAALAAIAGALMAACSG 254

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            ++PD+F       VI  V +GG   +     A  +L  + +     +   +        
Sbjct: 255 VVAPDVFSPLLATEVILWVAIGGRGRIGGPVVAAVVLTLLRQTVSSYSTDGWP------- 307

Query: 315 SFNMRHTTLMVIALFLVILMRSHSL 339
                   ++       +L   + L
Sbjct: 308 -------LILGSLFLACVLFMPNGL 325


>gi|156743439|ref|YP_001433568.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941]
 gi|156234767|gb|ABU59550.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941]
          Length = 291

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 90/294 (30%), Gaps = 24/294 (8%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           +Y + A G +I+  +  +++        IGA     L    G  I L +   A+IS   G
Sbjct: 17  VYALIALGFNIIFQTTRIINFAQGEFVMIGALVGYTLTVVLGWPIVLALAGVALISALVG 76

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           ++     +          + I++ +   I+ +         G                 +
Sbjct: 77  IVSERLIMLPIQRSSYRYSWIITTLAVAIIFRNLMGAEWLYGREDYRVPP---------L 127

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
               F     +       +L+    L   I ++ RRT    A R    N      +   +
Sbjct: 128 IPGVFFVGPAVVAYQQVIILVIAVILLILIEVFYRRTFFGKAIRATAFNYNIAGLMGIPV 187

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
                 +FA+S+   G+AG   A                +     +ILGG+ S       
Sbjct: 188 PMMIRLSFALSAVLSGIAGVLVAPLIFA--NVSMGILIGLKGFVAIILGGLGSPRGAVIG 245

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             I+  +      +    + + + F               L LV+L+R   L  
Sbjct: 246 GLIVGLLDTSVRALAPEGWGNFIVFG-------------VLALVLLIRPTGLFG 286


>gi|28210617|ref|NP_781561.1| ribose transport system permease protein rbsC [Clostridium tetani
           E88]
 gi|28203055|gb|AAO35498.1| ribose transport system permease protein rbsC [Clostridium tetani
           E88]
          Length = 328

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 88/296 (29%), Gaps = 26/296 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L+ V+  + L +      ++  I ++ +Q  +  + A G ++V+ + G + L+     A
Sbjct: 29  VLILVMLMIALTVMKPVFMTRNNIMTILLQTAVIAVIAIGETLVIITSG-IDLSVGSLVA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I   +  I        I   +    + +                       LI   I   
Sbjct: 88  ISGVASAIFMRDGMNMILACMLGILISTACG--------------------LINGFIVAK 127

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             I    +T G   I     L        S +               +    + M  L+ 
Sbjct: 128 GNIPEFIVTLGMMSIVRGASLVVTQGLPVSGLPDGFQVLGTGKLFGVIPVPAVIMIILAM 187

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              L LR+T I      I  N++A           K++ + +S    G+AG    A    
Sbjct: 188 IFTLILRKTLIGRYTYAIGSNEEATKLSGINTDRVKITVYGLSGLLAGIAGILLTARLIS 247

Query: 256 ISPDMFK-----FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             P              ++    + GG  +++       I+  +      +N   F
Sbjct: 248 AQPTAGTGYELDAIAAAVIGGASLAGGEGTITGTIIGALIMGVLRNGLNLLNVSAF 303


>gi|33595076|ref|NP_882719.1| branched-chain amino acid transport system permease [Bordetella
           parapertussis 12822]
 gi|33565153|emb|CAE35949.1| branched-chain amino acid transport system permease [Bordetella
           parapertussis]
          Length = 314

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 48/302 (15%), Positives = 104/302 (34%), Gaps = 37/302 (12%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           S+ + + I V+       V   +G L+        +GAY   +   +      L +  SA
Sbjct: 31  SLVLWLAINVLITASFRFVT-LIGELNFAVAGFVGLGAYMAGVAAVQLEWPFLLTLAASA 89

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           + +G   ++ G  +L+ +G Y  + +   +E+ + I  K + +                 
Sbjct: 90  VFAGLVSLVFGYITLRAKGAYFMLISFAFTEVIRMIYTKTEAVGGSS------------- 136

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                         +    E +    ++ +      ++  L ++        IR+N    
Sbjct: 137 --------GMIGIFAPAYLEAYYPAFVIAVVLALLWVLWRLEKSDFGKVLVAIRNNDAIV 188

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++   +   K+    VSS   G+AGA  A + + I P  F F   +  ++ + +GG + 
Sbjct: 189 ETVGINVHLTKVLCLGVSSFVAGIAGALLAYANNVIGPGDFGFLLAVYALAYLKVGGESH 248

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +        +L  +                +F  SF          A+ + +L+    L+
Sbjct: 249 ILGAVVGAIVLTLL---------------GQFALSFGPYEHIFYGAAIVISVLLMPGGLI 293

Query: 341 RL 342
            L
Sbjct: 294 GL 295


>gi|327399762|ref|YP_004340631.1| ABC transporter integral membrane subunit [Hippea maritima DSM
           10411]
 gi|327182391|gb|AEA34572.1| ABC-type transporter, integral membrane subunit [Hippea maritima
           DSM 10411]
          Length = 287

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 110/303 (36%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GL++V G L ++ +     Y +GAY+ + +       +   +  
Sbjct: 6   VVNGLTIGGVYALIAMGLALVYGILRIIHVAHAGVYVVGAYTGLYVFMFSHSFVLAALAS 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +    +I  L  +    +   I+ +    +F +I    + +               
Sbjct: 66  MIASAVVGVLIEELVYMPLLNNSPIISLIASIGVFISIEEGIRLVFG------------P 113

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +  S +    +    +I       VLL        I    ++T    A + + ++ +
Sbjct: 114 YIKSFPSAMFSGEYHLGSLILSSSQVVVLLVGMISIVLIWFITQKTRFGLALKAVSEDIE 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               ++    +  + AFA SSAF G+AG    A  + +             ++I+++GGM
Sbjct: 174 MAEGVSIDSRWMIMLAFAFSSAFAGLAGLLVGAYFNSV-YPSMGDVPAYKSLAIIVVGGM 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++     A  ++  +  +  G+             +  +   +L  I + +++L++   
Sbjct: 233 NNIWGAFFAAIVIGLLETIAIGV------------FNVPLPRDSLAFIFMVVMLLIKPSG 280

Query: 339 LLR 341
           ++ 
Sbjct: 281 IMG 283


>gi|260774111|ref|ZP_05883026.1| ribose ABC transport system permease protein RbsC [Vibrio
           metschnikovii CIP 69.14]
 gi|260611072|gb|EEX36276.1| ribose ABC transport system permease protein RbsC [Vibrio
           metschnikovii CIP 69.14]
          Length = 327

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 88/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   I ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 29  LIALLFLVVVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +     +  +       +   G+   + +                + F  
Sbjct: 88  LCGAFAASLIALEVPVMVAVPTALLAGAALGGISGIIIAK------------GKVQAFIA 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T       +F        Y + +   +  M  + A
Sbjct: 136 TLVTMTLLRGVTMVYTDGRPISTGFTDTADAFAWFG-----TGYALGIPVPVWMMVVVFA 190

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 191 AAWYLLNHTRFGRYIYAMGGNESAARLSGINVDRVKIGVYAICGLLSALAGIIVTSRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 251 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVTSYYQMI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 AKAAVILLAVLV 322


>gi|300311114|ref|YP_003775206.1| branched-chain amino acid ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300073899|gb|ADJ63298.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 296

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 84/284 (29%), Gaps = 8/284 (2%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               +IY + A+G  +   + G L+     A  +GA   + +        +L   +   I
Sbjct: 12  IALGMIYAVIAFGYQLTFATSGTLNFGQGEALMLGALVGLSVVGNIHGGPYLNYWLMIPI 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G + G+                   I   I +        +      D        
Sbjct: 72  VLVFGALQGMFVEWIGVRPAIKIKSEFGWIMSTIALAIIFKNVAENIWGKDDLP------ 125

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             S I    F       +     V++G   + A++ L+ R++    A     +++ A   
Sbjct: 126 FPSPISGAPFQIFGANVQPMQVLVVVGALLIMAAVELFNRKSIYGKAVVATSNDRDAAGL 185

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +          ++A+SSA    AG   A     ++      +  +   ++ I+GG+TS  
Sbjct: 186 MGINTSMVITFSYALSSATAAFAGVLVAPL--TLTGATMGAALGLKAFAVAIIGGLTSGM 243

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
                  IL     L        +  +        +       +
Sbjct: 244 GAIVGGLILGVAETLTGFYISTGYKEVPGLVLLLLVLAVKPAGL 287


>gi|288553813|ref|YP_003425748.1| branched-chain amino acid ABC transporter permease [Bacillus
           pseudofirmus OF4]
 gi|288544973|gb|ADC48856.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus pseudofirmus OF4]
          Length = 289

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 95/306 (31%), Gaps = 27/306 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     ++  + A GL+++ G + +L+      +  GAY+  I       S    I  +
Sbjct: 9   INGLATGMLIFLLAAGLTLIFGLMDVLNFAHGALFLWGAYA-GIWAYTTTGSFLAGILAA 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +I    G ++    +K          LI       +    K                 +
Sbjct: 68  LVIGMVLGYLLERFIIKPVYGNHIQQLLITLGAMLVLSEVVKVFWG-----------PNI 116

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                 L     +    +    +  +++     +   ++  L RT I    R    +++ 
Sbjct: 117 LQAQAPLWLQGSWEIGGLYLIKYRLFIIAVGLIVFLGLLFLLNRTKIGLIVRAGVMDKEM 176

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             SL   I    L  F + +A  G+AG  F      I  +       I+   +V++GGM 
Sbjct: 177 VQSLGINIRKVFLFVFMLGAAMAGLAGVLFGPYSGVIYAE-IGLEYGILAFIVVVIGGMG 235

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  I+  +                            +  + +  V++ +   +
Sbjct: 236 SVLGSMVAAIIVGLLGAYAGYYA--------------PDIALAVNFLIMLAVLIFKPSGI 281

Query: 340 LRLRTP 345
           + ++  
Sbjct: 282 MGMKEA 287


>gi|163845510|ref|YP_001623165.1| hypothetical protein BSUIS_B1424 [Brucella suis ATCC 23445]
 gi|163676233|gb|ABY40343.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 287

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 95/303 (31%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A GL++V G L +++L       +G Y   ++ + +G+  ++ +  
Sbjct: 8   VINGILLGGLYAIMAQGLALVWGVLNIVNLAHGTMIMLGGYVTWLVFANFGIDPFIGVFA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A +    G  +    L           L+++   + I               +      
Sbjct: 68  AAAVMFCFGYALQRCVLNLVARGPMFNALLITFGIEIIFTDVAQHVFSADFRAIIPSYSA 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +            F    +   +      +    LS  +  ++  T +  A R    N  
Sbjct: 128 VN-----------FNVYGITIPLMNLLAFIAAFVLSGFMFFFMMTTKLGRAIRATAQNLT 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A               F +  A  G+AG  +A                    +I I+GG+
Sbjct: 177 AARLYGVEPRHLYAVTFGIGVAIAGVAGGLYATVNQL--NPYIGVPLTAKSFAITIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +   +     IL  +  L        + +++ F               L LV+++R   
Sbjct: 235 DNPLGVILGGLILGVIESLTVLYLGDTYRNVVSFS-------------ILVLVLIIRPGG 281

Query: 339 LLR 341
           LL 
Sbjct: 282 LLG 284


>gi|163795562|ref|ZP_02189528.1| putative permease component of ABC transporter [alpha
           proteobacterium BAL199]
 gi|159179161|gb|EDP63694.1| putative permease component of ABC transporter [alpha
           proteobacterium BAL199]
          Length = 319

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 52/323 (16%), Positives = 122/323 (37%), Gaps = 15/323 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  V         LG      ++ ++ +      +   GL ++    GL+S    + +
Sbjct: 7   WTIPGVTVGFAAVAVLGLLFLPDWLMNLTVIAFARALAVVGLMVLW-RTGLVSFGHALYF 65

Query: 75  AIGAYSYVILGSR-YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            +GAY+  +LG       + + +P + +++   G+ +G    ++R  + A+ +L  S + 
Sbjct: 66  GLGAYTVALLGKDDGISEVLITLPAATLVAATVGLFLGFIVRRYREIFFAMLSLAFSMVL 125

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             IL+K + +                G  VR+       P         ++ VL  +C+ 
Sbjct: 126 YGILVKTEALG------------STDGFNVRTPTFLGFAPEDAGTTLRAIFLVLCALCWT 173

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
            A ++    ++ +      IRDN+     L  ++  A    + +S+A  G+ G   A + 
Sbjct: 174 VAVLVHRYLQSTLGRLTTAIRDNEIRVEYLGYSVAQAIHGKYVMSAALAGLGGGILAIAL 233

Query: 254 DRISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
            ++ PD    ++ +  ++ + IL G  S++     + I   +         + +  ++  
Sbjct: 234 GQVDPDSMVNWTVSGELVFVTILSGPGSVAAPFIGSMIYELIRTYAFEWLPHAWQLIVGV 293

Query: 313 DCSFNMRHTTLMVIALFLVILMR 335
                +      V +L   +  R
Sbjct: 294 TLLSIIFFLPGGVWSLLARLRRR 316


>gi|55377439|ref|YP_135289.1| branched-chain amino acid ABC transporter permease [Haloarcula
           marismortui ATCC 43049]
 gi|55230164|gb|AAV45583.1| branched-chain amino acid ABC transporter permease protein
           [Haloarcula marismortui ATCC 43049]
          Length = 329

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 47/330 (14%), Positives = 101/330 (30%), Gaps = 19/330 (5%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
            L  FL   +    I +   +  +YVM A GL+++ G +G+L+        +GAY   +L
Sbjct: 5   ALAEFLTLGELGGVIVNGLAKSALYVMIASGLTLIFGLMGVLNFAHGSLTMVGAYLGGLL 64

Query: 85  GSRYGLS----------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
                             ++ I V   +    G  +    ++   D   I  ++++    
Sbjct: 65  MVVTVTGGTAPLTRLGLFFVAIVVVFALLTMLGGAIETTIIRPLYDRPPIYQILLTFGLT 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++ +   I  G  G       +      +            V       + +L      
Sbjct: 125 LVIEEVVRIVLGVYG-LQPLSDWQAALATKPQFLREPVALGPVSVGWMSLFQILLGTITV 183

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I  +L +T      R   ++ +   +L   +       FA+     G AG        
Sbjct: 184 VGIWAFLTKTRYGLYIRAGSEDTEMASALGIDVRQVFTVVFALGIGLAGAAGTLLMWDPT 243

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             +         +    +VI+GG+ +      A  ++         M         +   
Sbjct: 244 WGASVPLAAETLLPAFIVVIVGGLGTFRGTVVAALVVG--------MADAVTTWWFQNVI 295

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
            F      ++ + L + +++R   L  +  
Sbjct: 296 EFTGLPELVLFLVLVVTLIVRPQGLFGVEE 325


>gi|241664789|ref|YP_002983149.1| inner-membrane translocator [Ralstonia pickettii 12D]
 gi|309780402|ref|ZP_07675152.1| branched-chain amino acid ABC transporter, permease protein
           [Ralstonia sp. 5_7_47FAA]
 gi|240866816|gb|ACS64477.1| inner-membrane translocator [Ralstonia pickettii 12D]
 gi|308920795|gb|EFP66442.1| branched-chain amino acid ABC transporter, permease protein
           [Ralstonia sp. 5_7_47FAA]
          Length = 294

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 107/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y M + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGVPLPAMLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLTWMGFS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+  W ++ +S ++ G  G+++    L+F      +  L+++     ++        G
Sbjct: 63  YLGVPYWAMLVLSPLVIGLLGVVIERTLLRFIYKLDHLYGLLLTLGVTLVIEGVFRAIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+         G T             F++   +  +V++    +  +    + +T +
Sbjct: 123 VSGLPYDTPQLLQGAT----------DLGFMMLPNYRAWVVVASLAVCFATWFMIEKTKL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +   S  
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPLMVTLTYGFGVALAAFAGVLAAPVIQI--SPLMGQSMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+         L  +  L                  +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSIVTGLGLGVIEGLTKVF--------------YPQASATVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + LV+L+R   L  
Sbjct: 277 IMVLVLLVRPAGLFG 291


>gi|121611808|ref|YP_999615.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121556448|gb|ABM60597.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 300

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 93/307 (30%), Gaps = 17/307 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      I ++ A GL+IV G +G++++      A+GAY   +    +G      + +
Sbjct: 10  MFNGVSLFTILLLMAIGLAIVFGLMGVINMAHGELMALGAYMTYLAARFFGHFAPGWMDL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +      +                         +L  W      +           
Sbjct: 70  YLFAAIPFAFAVTFAFGYLLERGF--IRFFYDRPLDTLLATWGLSLMLQQSYRSIFGAQE 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + S +     P++ +   +   ++      ++  + L L RT      R +  N+ 
Sbjct: 128 VSVPLASWLAGAWEPTAGIQLPLTRIFIAGLTAVVAIGVYLLLYRTPWGLKVRAVTQNRA 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              ++           FA+     G+AGA F       +         +    +V+ GG+
Sbjct: 188 IAGAVGIDTRRVDAMTFALGCGLAGIAGAVFTMIGS--TNPGTGQLYIVDAFIVVVFGGV 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL   A +   +         +                      +++    V+ +R + 
Sbjct: 246 QSLIGTALSGFAIAQAQTWLEYLMSGSMARAT-------------ILLLAIAVLCLRPNG 292

Query: 339 LLRLRTP 345
           L  +R+ 
Sbjct: 293 LFAIRSR 299


>gi|84685698|ref|ZP_01013595.1| branched-chain amino acid ABC transporter, permease protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84666364|gb|EAQ12837.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 317

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 54/299 (18%), Positives = 119/299 (39%), Gaps = 12/299 (4%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            LL+ + + A  +  Y  +   +ILI V+F   + +V+G  G+ +L     Y  GAY+  
Sbjct: 13  ALLVLVVIAAFFAFPYNLAFVTRILIMVLFVLSIDLVLGFAGIATLGQAAMYGTGAYAAG 72

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +       +    + V  +      ++ GL  ++ +G  L + T+ +++I   I  K + 
Sbjct: 73  LFAVHVTAAPLPGLVVGMVAGAILAVVSGLVLMRTKGLTLIMLTIAVAQICHEIANKARD 132

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+        LG               F       Y+ +  + F+    +  L 
Sbjct: 133 VTGGADGLRGIRMEPVLGL------------FEFDFIGRTAYWYVAVVVFVVFLALRRLA 180

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
              +  + R I ++ +   ++   +   ++ A+ +     G+AGA  A     +S +++ 
Sbjct: 181 AAPLGLSLRGIHESPERMTAIGAPVYRRQVLAYTLGGGIAGIAGALAAQVTQLVSLEVYS 240

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
           F+ +   + ++ILGG   L      T + + V  +    + + +  L+ F     +   
Sbjct: 241 FTLSAEALIMLILGGTGRLWGAIVGTVLFMTVHHVAASADPFNWLFLIGFLVLGVVFFL 299


>gi|163795203|ref|ZP_02189171.1| probable amino-acid transmembrane lipoprotein abc transporter
           [alpha proteobacterium BAL199]
 gi|159179601|gb|EDP64130.1| probable amino-acid transmembrane lipoprotein abc transporter
           [alpha proteobacterium BAL199]
          Length = 287

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 52/300 (17%), Positives = 101/300 (33%), Gaps = 25/300 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            IQ  +Y + A GL++V G L +L +     + +G Y+  +L +    S+ + +  +A+ 
Sbjct: 11  LIQGSVYALIAVGLTLVYGLLRILHVAHAGLFTLGGYA-GVLVTNATGSVAVALVFAALS 69

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
            GA GM +     +          LI S      + +   I  G  G+            
Sbjct: 70  VGAVGMAVYRFCYEPILRRPPYVALIASIGLFIAMEELFRIVFGPFGLTYDIVPLQG--- 126

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                         +         +     L   + L   RT I  AWR      +   S
Sbjct: 127 --------SVVIGGMYLRSAELVTMALAAVLIGGLGLLAGRTRIGLAWRATVSVPEMAES 178

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
               I+  +   F + SA  G+AG   +   + + P M   +     ++I++LGG+ ++ 
Sbjct: 179 FGIDIVKVRYLNFFIGSALAGVAGVMVSVLNNLVEPTMGSVASY-KALAIIVLGGLGNVR 237

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A   L  +          + +               +    L +++++R   L   
Sbjct: 238 GTLVAALTLGVIEAYGTIYLAGFLD------------RDAIAFAVLIVILMVRPQGLFGR 285


>gi|91787503|ref|YP_548455.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91696728|gb|ABE43557.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas sp. JS666]
          Length = 287

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 99/302 (32%), Gaps = 26/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M A GL+++ G +G+++L     Y +GAY    L +++          
Sbjct: 10  LLNSVQYGLLLFMLAAGLTLIFGIMGVVNLAHGSFYMLGAYLAWSLSAQF---------- 59

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            ++        +         ++L        +    +L+ +  I   +    +      
Sbjct: 60  GSLTLAIVVGAVLSVIFGLALEWLLFRHFYQRDHLDQVLLTFGLIYIFEELRSILWGDDV 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G T+  L+      +  + Y ++  ++      L+  +   + +T +    R    N++
Sbjct: 120 HGVTIPELLGASIPLTENLSYPVYRLFMAGVCIALALGLYGLISKTRLGMKIRAGAFNRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL   I       FA+      +AG   A                I+   +V++GG+
Sbjct: 180 MAESLGINIKRIHAVVFALGVGLAAVAGMIAAPIASV--YPNMGSQVLIMCFVVVVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++  V      +                     L+ + +  V+L +   
Sbjct: 238 GSVRGALIAALLVGLVDTFGKVLLPSVAG--------------MLVYMLMAGVLLWKPEG 283

Query: 339 LL 340
           L 
Sbjct: 284 LF 285


>gi|13474090|ref|NP_105658.1| branched-chain amino acid ABC transporter, permease protein
           [Mesorhizobium loti MAFF303099]
 gi|14024842|dbj|BAB51444.1| branched-chain amino acid ABC transporter, permease protein
           [Mesorhizobium loti MAFF303099]
          Length = 293

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 89/300 (29%), Gaps = 24/300 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   +  + A GLS+V G + ++++     + +GA     + S  G    L    + +I
Sbjct: 15  LVTSAVLALTALGLSLVFGVMRVVNVAHGEFFMLGAVLAWAITSAIGGHPALGFLAALVI 74

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +      + L + +     L             +L   + +     G             
Sbjct: 75  APLIVGAIALVAERLVLRRLNYNPEATIVATIGMLYIIQQLALSFYGPEARPVEPPFS-- 132

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                  +R    +  Y  +   ++     L  +  L L RT I    R  + + +   +
Sbjct: 133 -------YRILLPWFGYSGYKLSIIAASALLLIATWLVLTRTRIGLIMRATQYDSETAQA 185

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
               +       FA+ +    +A              +      ++   +VI+GG+ SL 
Sbjct: 186 FGIPVDRVYGGVFALGAMLAAIAAVLIVPISQA--HYLMGQDPLLLSFIVVIIGGLGSLR 243

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A  ++     +           ++               + + +V++ R   L   
Sbjct: 244 GTVVAAVLIGLSDGIISMFFSPTLAKMIAT-------------LLVAMVLVFRPQGLFGT 290


>gi|220926356|ref|YP_002501658.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219950963|gb|ACL61355.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 291

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/297 (11%), Positives = 75/297 (25%), Gaps = 26/297 (8%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            +Y + A G  ++  +  +++        + A+  V+         WL   ++       
Sbjct: 16  AVYALVALGFVLIFRATNVVNFAQGEFSMVAAFLMVVFAVDLQWPYWLSFLLAIGGMAVL 75

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G +  L           +  +I +      L        G     ++             
Sbjct: 76  GALFNLGVYYPLRHRTYLPVIISTIGASIFLANTTLALYGPQPQVLSPVFET-------- 127

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                     V  +     ++     L A    +   T +    +    +++    L   
Sbjct: 128 ---QGILLGPVFLDSQYLLIIAVTALLVAFQYWFFEHTLLGKKLQATSQDKEMAALLGIP 184

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +    +  F  S+   G+AG   A             +  +   +  I+GG   ++    
Sbjct: 185 VAGMIMLTFVYSAVLGGIAGILVAPVLFV--SIQMGATIALKAFAATIIGGFGDVTGAII 242

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
               L  +           +     F             I L   + +R   L   R
Sbjct: 243 GGLALGIIETFGAAYVSVPYKDAFAF-------------IVLVAFLTLRPQGLFGER 286


>gi|289522971|ref|ZP_06439825.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503514|gb|EFD24678.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 303

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 89/289 (30%), Gaps = 1/289 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G S+V G + L++      +A+G+Y    L      ++     +
Sbjct: 8   LLNGLTIGSFYALIALGYSMVYGVMKLINFAHGDLFALGSYLGYTLLVWSAGAVSQRFGL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++ A                      +       +++    ++     + +A     
Sbjct: 68  WGGMAAALLFAFFAVGCAGVLMERVAYRPVQKSGRLPLVVSALGVSIFLENLIMAVWGPR 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S++  +     +        ++L+    L   +   +++T    A R    +++
Sbjct: 128 YQAYPASVVPTYTISLGWFHITSMQLFILILSFVLMLILYYIVQKTTFGAAIRATALDKE 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +    L  F +  A  GMAG        +IS  M  ++  +   +  ILGG+
Sbjct: 188 MASMLGIDVGKITLFIFFLGPALGGMAGVMNGMYYRQISFVM-GWNYGLKAFTATILGGI 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            ++        +L  V           +  +  F     +       + 
Sbjct: 247 GNIPAAMLGGLLLGLVEMFGAAYISSAWKDVFTFLILILILIFRPTGLI 295


>gi|260222131|emb|CBA31391.1| hypothetical protein Csp_F37290 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 309

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 101/309 (32%), Gaps = 16/309 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A +         + + +  PV
Sbjct: 8   LLGGLMAGMLYSLVALGFVLIFKASGVFNFAQGAMVLFAALAMARFAEWIPVYLGITSPV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A +    G  + +  + +  + L +  L+  E    ++         +           
Sbjct: 68  AANVLAFVGAGVVMFVVAWIIERLVLRHLVNQEGTTLLMATLGITYFMEGLGQSIFGSSI 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFM----YYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
               +           S     I +    +Y  +    L A + ++ ++TA   A R + 
Sbjct: 128 YKIDIGMPKDPVMILESTFEGGILINKEDFYAAIIAAALVALLSVFFQKTATGRALRAVA 187

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           D+ +A  S+   +    +  + V+     +AG  + +            +  +  + +VI
Sbjct: 188 DDHQAAQSIGIPLNRIWVIVWCVAGVVALVAGMIWGSKL---GVQFSLTTVALRALPVVI 244

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           LGG+TS+        I+    +L       Y    ++   +          +     +L+
Sbjct: 245 LGGLTSVPGAIVGGLIIGVGEKLSEVYLGPYVGGGIEIWFA---------YVLALGFLLI 295

Query: 335 RSHSLLRLR 343
           R   L   +
Sbjct: 296 RPQGLFGEK 304


>gi|260769522|ref|ZP_05878455.1| ribose ABC transport system permease protein RbsC [Vibrio furnissii
           CIP 102972]
 gi|260614860|gb|EEX40046.1| ribose ABC transport system permease protein RbsC [Vibrio furnissii
           CIP 102972]
          Length = 322

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 96/312 (30%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 24  LIALLFLIVVVSFLNPNFFTFDNLMNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLA 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   ++        + + + +P + +     G I G+   K +        + M+     
Sbjct: 83  LCG-AFAASLIAMEVPVLVAVPTALLAGAVLGGISGIIIAKGKVQAFIATLVTMT----- 136

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G   +Y   R    G T  +    +      +   + ++ +++       
Sbjct: 137 -------LLRGVTMVYTDGRPISTGFTDTADAFAWFGTGYALGIPVPVWIMVVVFAAAWY 189

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +      T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 190 LL----NHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGLLSALAGIIVTSRLSS 245

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 246 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 305

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 306 AKAVVILLAVLV 317


>gi|23500682|ref|NP_700122.1| branched-chain amino acid ABC transporter permease [Brucella suis
           1330]
 gi|161621008|ref|YP_001594894.1| hypothetical protein BCAN_B0977 [Brucella canis ATCC 23365]
 gi|254703274|ref|ZP_05165102.1| hypothetical protein Bsuib36_04976 [Brucella suis bv. 3 str. 686]
 gi|260567791|ref|ZP_05838260.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40]
 gi|261753905|ref|ZP_05997614.1| inner-membrane translocator [Brucella suis bv. 3 str. 686]
 gi|23464330|gb|AAN34127.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella suis 1330]
 gi|161337819|gb|ABX64123.1| Hypothetical protein BCAN_B0977 [Brucella canis ATCC 23365]
 gi|260154456|gb|EEW89537.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40]
 gi|261743658|gb|EEY31584.1| inner-membrane translocator [Brucella suis bv. 3 str. 686]
          Length = 295

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 54/318 (16%), Positives = 115/318 (36%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           +++   +      + +    I    Y M + GL+I+ G L +++      Y +GA+   +
Sbjct: 1   MVMIFGIPLQALLRQLLVGLINGSFYAMLSLGLAIIFGLLRIINFAHGAQYMLGAFVGYL 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L S  G+S W  + ++ +I G  G I+   +L    +   +  L+ +     ++      
Sbjct: 61  LLSWLGISYWPALVLAPLIVGLGGAIIERVALSRLYNLDPLYGLLFTFGLALVIEGTFRY 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G AG   A      G               F+    +  +V++   F+     L + +
Sbjct: 121 YYGAAGQPYAVPPSLAG----------GRNLGFMFLPNYRAWVVVASLFVCLGTWLLIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N     +    +       +A+ SA  G+AG   A         +   
Sbjct: 171 TKLGAYLRAATENPTLVKAFGINVPLLLTFTYALGSALAGLAGIMAAPIYQV--SPLMGS 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  I+V ++V++GGM S+        +L     L                  +    + +
Sbjct: 229 NIIIVVFAVVVVGGMGSILGAIITGYVLGIAEGLTKVF--------------YPEASSIV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           + + + +V+L+R   L  
Sbjct: 275 VFVIMAIVLLVRPAGLFG 292


>gi|88801164|ref|ZP_01116708.1| branched-chain amino acid ABC transporter, permease protein
           [Reinekea sp. MED297]
 gi|88776101|gb|EAR07332.1| branched-chain amino acid ABC transporter, permease protein
           [Reinekea sp. MED297]
          Length = 332

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/327 (10%), Positives = 92/327 (28%), Gaps = 18/327 (5%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
                 + S  +   IY M A G++++   L             GA+    L   +    
Sbjct: 6   FLFNSVVISGAVIGAIYAMGAIGVTLIFSILRFAHFAHADLMTTGAFVTFFLTVMFPGVG 65

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA-------TLIMSEIFQNILIKWKPITN 145
             +   +A +     M++                       +++      +    + +  
Sbjct: 66  PAVGLPTAFVMLPIAMVLTSLIAVGIDKAFYKPLREHNVKPIVLVMASLGVTFMLQGLVR 125

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
             AG    +        +  +   +   S  ++       + L       S+  +L R+ 
Sbjct: 126 LFAGTGSRNLFVDDRKEIFRIDLPWELASRKIVITEPQLLLFLFTIIAVVSLHYFLTRSR 185

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +  A R + DN          +    +  + ++ +    AG   +   D        F+ 
Sbjct: 186 LGKAMRAMSDNADLARVSGINVNVVVIVTWVIAGSLCAAAGTLLS--LDVALKPDLSFNL 243

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCG---------MNFYYFNSLLKFDCSF 316
            + + +  I+GG+  +        ++     L                 ++         
Sbjct: 244 LLPIFAAAIVGGVGHVYGAVLGGFVVGFAESLAVFNWAVVLRPLARAMEWDLPRSMALVP 303

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLR 343
                T+    L  ++++R   +L+ +
Sbjct: 304 TEYKITVPFFILIAILVLRPTGILKGK 330


>gi|27382980|ref|NP_774509.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27356153|dbj|BAC53134.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 707

 Score = 66.8 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 100/328 (30%), Gaps = 34/328 (10%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             I  +L ++  L L   +    S   +     Q       A GL++VV   G + L+  
Sbjct: 31  TAIPVILLLIVGLALSRSIDNFLSPASLADTARQAGEIGFIALGLALVVIVGG-IDLSVG 89

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +A+  +  + L    G  +  ++  + +     G + G+     R        + +  
Sbjct: 90  SIFALTDFCALYLLDVLGWPVPAVVAATLLCGALLGAVNGVLIGYLRLRAFITTLITLII 149

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                 +  +  +N          +      + S           +     +Y V+    
Sbjct: 150 YRSAYDLLIQRYSNA---------IASAFPDIPSWDFIGGGSIFGIPTVALVYIVIA--- 197

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                  +++ R         I  ++++ ++    +       +  S     +   FFA+
Sbjct: 198 ---IFGHIFMTRLRPGWHITAIGGSRRSAYNSGIPVRRTIALCYVASGVLTSIGALFFAS 254

Query: 252 SRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYY 305
               +  D       +IV++  +L      GG  S++K A    I++ +      MN   
Sbjct: 255 RLGTVGGD-IGVGLEVIVLTATVLGGITLGGGKGSVAKSAVGVLIVLLITNGLTTMN--- 310

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVIL 333
                       +    L  I L   ++
Sbjct: 311 --------ARGGVNRMALAGILLVAAMV 330


>gi|148259500|ref|YP_001233627.1| inner-membrane translocator [Acidiphilium cryptum JF-5]
 gi|146401181|gb|ABQ29708.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Acidiphilium cryptum JF-5]
          Length = 306

 Score = 66.4 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 73/326 (22%), Positives = 129/326 (39%), Gaps = 36/326 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L  +   L+ L L    +  YI  +      + +FA    ++ G  G ++        +G
Sbjct: 9   LVALAVFLIVLALFPLGANGYILGVLTTAFYFAVFAMSWDLLFGYAGEVNFGPTFLIGLG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   +  +  GL + L + V A+++ A G+ + +P+L+  G YL + TL+   + Q  +
Sbjct: 69  AYGAGMSNALLGLPVPLAVVVGAIVAVAGGVALAIPALRLSGPYLGLITLVSVLLLQQAI 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + +  +T G+ G+ V D L                     I     Y   L    +S  I
Sbjct: 129 VIFAGVTGGEIGLSVPDVLS--------------------ISSAVNYEYALAFMLVSGLI 168

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  + R+++    +    +Q A  +L       K+ AFAVS+ F G+AGAF        S
Sbjct: 169 LFLISRSSLGMILQAAGQDQVAAAALGFNATRHKILAFAVSALFSGLAGAFLVFYLGTAS 228

Query: 258 PDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
                  S  + VI   +LGG  ++   A  +  LI   EL   +               
Sbjct: 229 VSAVVDISIGVRVIIAAVLGGRRTIIGGAIGSVFLIVAGELLRPI--------------- 273

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
               T ++ +   +VI++    LL L
Sbjct: 274 GQLSTFVVALIALVVIVLFPDGLLGL 299


>gi|154246355|ref|YP_001417313.1| monosaccharide-transporting ATPase [Xanthobacter autotrophicus Py2]
 gi|154160440|gb|ABS67656.1| Monosaccharide-transporting ATPase [Xanthobacter autotrophicus Py2]
          Length = 360

 Score = 66.4 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 83/313 (26%), Gaps = 18/313 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +L +   +   +      S   +  +  Q+ I  +     +++V + G + L+     
Sbjct: 52  AIVLVLGVAVFSAIVGPRFYSAFNLSLILQQVTIICIIGVAQTLIVLTAG-IDLSVGAVM 110

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +     L    GL + +          ACG   GL  ++ +     +     S  F 
Sbjct: 111 VLCSVIMGKLAVALGLPVPVAFAAGLATGAACGAFNGLLVVRLKLPPFIVTLGTWSIFFS 170

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L             Y   +        ++        +   +    + Y    M  L 
Sbjct: 171 LNL------------WYSGAQTIRAQDVAKAAPFLQWLGTPVDLLGARLTYGTFFMLGLV 218

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A +   L RTA+      + D+  A             S +  +     +          
Sbjct: 219 AIVWYVLNRTALGRHIYAVGDDPDAARLAGIRTDKVLFSVYVAAGVICALGAWALIGRIG 278

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            ISP   + +    + ++VI      GG  S+        I+                  
Sbjct: 279 SISPQAGQTANLDSITAVVIGGASLFGGRGSIIGTLIGALIVGVSRSGLALSGVDVLWQE 338

Query: 310 LKFDCSFNMRHTT 322
                   +  T 
Sbjct: 339 FAVGSLIIVAVTL 351


>gi|255035888|ref|YP_003086509.1| Monosaccharide-transporting ATPase [Dyadobacter fermentans DSM
           18053]
 gi|254948644|gb|ACT93344.1| Monosaccharide-transporting ATPase [Dyadobacter fermentans DSM
           18053]
          Length = 350

 Score = 66.4 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 89/322 (27%), Gaps = 18/322 (5%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           L L K+  ++ L  +   L +      T S  +  ++  QI + +  + G++++V + G 
Sbjct: 34  LPLAKFQSLIALFLLCLALSIMSDKFLTFSNLW--NVMRQISVNICISVGMTLIVLTAG- 90

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+       L           + +   + GA             G     A
Sbjct: 91  IDLSVGSVLALCGAITAGLLKNGIELPGQNLFIGFTVLGAI----------LAGILSGSA 140

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
               +            +                            F      + + +  
Sbjct: 141 LGAFNGWAITKFKVPPFVATLAMLTVARGLTMLWTGGFPISGLGDTFLFIGTGWFLGIPV 200

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            +     + A  +    +T I      I  N+ A       +   K+  + ++ A   + 
Sbjct: 201 PVWISIVVVALAVFLTDKTRIGRYIYAIGGNESASRLSGINVNRVKIVVYTIAGALAAVG 260

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G    +  D   P+     E   + ++VI      GG  S+        I+  +      
Sbjct: 261 GIMVTSRLDSAQPNAGISYELDSIAAVVIGGTSLSGGRGSILGTVLGALIIGVLNNGLVL 320

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +N   F   +       +    
Sbjct: 321 LNVSPFWQQVVKGLVILLAVII 342


>gi|228964943|ref|ZP_04126046.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228794734|gb|EEM42237.1| Branched chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar sotto str. T04001]
          Length = 213

 Score = 66.4 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 64/171 (37%), Gaps = 9/171 (5%)

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
              YYV L    +   ++    +++I    + I  N++   +L   ++  K+ A  V+  
Sbjct: 39  FTFYYVTLICLIVIFILLRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGI 98

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
              ++G  F  +   ++  +F     +  + + ++GG+ +L      + I+  +      
Sbjct: 99  VAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGVGTLIGTIAGSGIIESLKYYLSE 158

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           +   Y             R T ++ +   +V+L+    L+         +R
Sbjct: 159 LATEY---------PIFERWTIILGLLYIIVLLVFPKGLVGTVKKLKGFKR 200


>gi|187477586|ref|YP_785610.1| ABC transporter permease [Bordetella avium 197N]
 gi|115422172|emb|CAJ48696.1| ABC transporter, permease protein [Bordetella avium 197N]
          Length = 295

 Score = 66.4 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 112/315 (35%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y M + GL+++ G L +++      Y +GA+   +  S
Sbjct: 4   IFGIPIQALLGQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMLGAFVAWMGLS 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL+ W+++ ++ ++ G  G+I+    L+       +  L+++     ++        G
Sbjct: 64  YLGLNYWVMLILAPLVVGLFGIIIERCLLRHLYKLDHLYGLLLTFGLTLLIEGIFRSLYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+I  I+  +V++    +  +    + RT +
Sbjct: 124 VSGQPYPTPDLLRGAT----------NLGFMILPIYRGWVVIASLVVCLATWFVIERTRL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A  G AG   A         +   +  
Sbjct: 174 GALLRAGTENPKLVEAFGVNVPRMITLTYGFGVALAGFAGVLAAPVLQI--SPLMGSNLI 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+         L  +  L                  +    +T++ I
Sbjct: 232 IVVFAVVVIGGMGSIMGAIVTGLGLGVIEGLTKVF--------------WPEASSTVVFI 277

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L+R   L  
Sbjct: 278 IMAIVLLLRPAGLFG 292


>gi|170739093|ref|YP_001767748.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168193367|gb|ACA15314.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 330

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 53/288 (18%), Positives = 112/288 (38%), Gaps = 14/288 (4%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++  +ILIY + A   ++++G  GLLS    I + +G+Y+  +L  R G     ++P  A
Sbjct: 30  TLASEILIYGLAAAACNLLLGYTGLLSFGQGIFFGLGSYAGGLLLLRAGWPAPAMLPAVA 89

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           ++  A    +G  S++ +G Y  + TL  S++F  +   +  +T G  G+    R     
Sbjct: 90  LVGAATATAVGWLSIRRQGVYFVMLTLAFSQLFYFLAYTFSDLTGGDNGLLNVPRPT--- 146

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                           +      Y  +  +     + +  +  +        IRDN+   
Sbjct: 147 -----------IGGKPLADPWAYYAFVAVLFLALFAALQRVALSTFGRTLLAIRDNEARA 195

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            ++   +   K++AFA+S A   +AGA  A           ++  +  ++ + I+GG  +
Sbjct: 196 SAIGFPVRAFKVAAFAISGAATALAGALHAMLIGVAPLSNMEYHTSETLLIMTIIGGAAN 255

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           L       A  +   +L   +   +   L     +  +     +   +
Sbjct: 256 LFASVLGAAFYLVAGDLLSAIWPRWLLLLGALLIAIALFMQRGLWGLI 303


>gi|187930600|ref|YP_001901087.1| inner-membrane translocator [Ralstonia pickettii 12J]
 gi|187727490|gb|ACD28655.1| inner-membrane translocator [Ralstonia pickettii 12J]
          Length = 294

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 106/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y M + GL+++ G L +++      + +GA    +  S
Sbjct: 3   IFGVPLPAMLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLTWMGFS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+  W ++ +S +  G  G+++    L+F      +  L+++     ++        G
Sbjct: 63  YLGVPYWAMLALSPLAIGLLGVVIERTLLRFIYKLDHLYGLLLTLGVTLVIEGVFRAIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+         G T             F++   +  +V++    +  +    + +T +
Sbjct: 123 VSGLPYDTPQLLQGAT----------DLGFMMLPNYRAWVVVASLAVCFATWFMIEKTKL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +   S  
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPLMVTLTYGFGVALAAFAGVLAAPVIQI--SPLMGQSMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+         L  +  L                  +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSIVTGLGLGVIEGLTKVF--------------YPQASATVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + LV+L+R   L  
Sbjct: 277 IMVLVLLVRPAGLFG 291


>gi|311105088|ref|YP_003977941.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310759777|gb|ADP15226.1| inner-membrane translocator 24 [Achromobacter xylosoxidans A8]
          Length = 625

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 103/315 (32%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              + +T     +    I    Y + + GL+++ G L +++      Y  GA+   +L +
Sbjct: 4   IFGVPSTALFGQLLLGLINGSFYALLSIGLAVIFGLLNIINFAHGAQYTAGAFLAWMLLN 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G++ W  + +  +I     +++    +        +  L+++     ++        G
Sbjct: 64  YLGVNYWAALVLVPLIMAVFAIVVERLLISRTYRMDHLYGLLLTFGIALLIEGGLRQAYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+                         F+    +  + +     L  ++ + + +T +
Sbjct: 124 VSGLPYTIP----------KALTGGINLGFMFLPWYRGWAVAVSLVLCLAVWVLIEKTRV 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N     S    +       +A+  A   +AG   A         M   +  
Sbjct: 174 GAMLRAATENPTVVRSFGINVPLLITLTYALGVALASVAGVIAAPIYQV--SPMMGSNLV 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           ++V ++V++GGM S+     +   L  +  L                  +       + I
Sbjct: 232 VVVFAVVVIGGMGSIMGAIVSGFGLGIIEGLTKVF--------------YPEAANLAIFI 277

Query: 327 ALFLVILMRSHSLLR 341
            + LV+L +   L  
Sbjct: 278 IMVLVLLCKPAGLFG 292



 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 57/302 (18%), Positives = 117/302 (38%), Gaps = 29/302 (9%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +  +++L + +FA   +++VG +GLLS      +   AY+  I+      +  L +    
Sbjct: 338 TFLMKVLCFALFAAAFNLLVGYVGLLSFGHAAFFGAAAYATGIVMKLLSATPELGLLAGV 397

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +  G  G+  G  +++ +G Y A+ TL +S++   I ++    T G+ G+    R     
Sbjct: 398 VTGGLLGLAFGAIAIRRQGIYFAMITLALSQLVYFIAVQA-GFTGGEDGLQSVPR----- 451

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                      F    +   + MYY  L +  L  + +L +  +      R++RDN++  
Sbjct: 452 --------GKLFGIFDLEGVMPMYYFTLAVFALGYAFVLRVLNSPFGEVIRSVRDNEQRA 503

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            SL  +    KL AF +S++  G+AG          S     +  N  V+ + +LGG+ +
Sbjct: 504 RSLGYSTSRYKLMAFTLSASVAGLAGGLKVLVFGVASLTDVHWHANGEVVLMALLGGIGT 563

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +          + +      +                     +      L +L+    ++
Sbjct: 564 VFGPLAGAFTFVSLQNYLAPL---------------GSWVLIVQGAIFVLCVLLFRDGIM 608

Query: 341 RL 342
            L
Sbjct: 609 GL 610


>gi|237807348|ref|YP_002891788.1| ribose ABC transporter permease protein [Tolumonas auensis DSM
           9187]
 gi|237499609|gb|ACQ92202.1| inner-membrane translocator [Tolumonas auensis DSM 9187]
          Length = 328

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 94/303 (31%), Gaps = 23/303 (7%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           ++        +   + ++  Q  +  + A G+++V+ + G + L+     A+   ++   
Sbjct: 38  VVSALNPNFFTVDNLLNILRQTSVNAIMAVGMTLVILTAG-IDLSVGSVLALCG-AFAAA 95

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
              + L I++ +PV  +     G + G+   K R        + M+            + 
Sbjct: 96  MLGHELPIFVTVPVVLLAGALLGGVSGVIIAKGRVQAFIATLVTMT------------LL 143

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G   ++   R    G +  S    +          + ++ +++        +      T
Sbjct: 144 RGATLVFTDGRPISTGFSDASDAFAWFGTGYLFGIPVPVWLMVVVFATAWYLL----NHT 199

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            I      +  N+ A       +   K+  +A       +AG    +      P      
Sbjct: 200 RIGRYIYALGGNEAATSLSGINVDRIKIIVYAACGFLSALAGIIVTSRLSSAQPTAGTGY 259

Query: 265 ENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           E   + ++V     + GG   +S       I+  +      ++   +  ++       + 
Sbjct: 260 ELDAIAAVVLGGTSLAGGKGRISGTLIGAFIIGFLNNALNLLDVSSYYQMIVKATVILLA 319

Query: 320 HTT 322
              
Sbjct: 320 VLI 322


>gi|148261589|ref|YP_001235716.1| monosaccharide-transporting ATPase [Acidiphilium cryptum JF-5]
 gi|146403270|gb|ABQ31797.1| ribose ABC transporter membrane protein / fructose ABC transporter
           membrane protein / mannose ABC transporter membrane
           protein [Acidiphilium cryptum JF-5]
          Length = 360

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 87/317 (27%), Gaps = 15/317 (4%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +   L +L V       L      S   +  +  Q+ I  +     ++VV + G + L+ 
Sbjct: 45  WLAPLIVLLVSLLGFGILVGHRFFSAYALTLILQQVTITGIVGVAQALVVLTAG-IDLSV 103

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                + +         YGL   + I        A G   G+   + +     +   +  
Sbjct: 104 GAIMVLSSVLMGQCSFSYGLPAEVSILCGFAFGAAVGWCNGVLVARMKLPPFIVTLGMWQ 163

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +     +     T G A I +   L                            Y ++ M
Sbjct: 164 IVLAANYLYSGNQTIGAAQISLKAPLLQ---------YLGNTFVIGGANGATFTYGVVLM 214

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L       LR TA       + D+  A       +    +  + +S     +AG    
Sbjct: 215 IGLVLLFAYVLRHTAWGRHVYAVGDDPDAAALAGVNVRRMLIGVYTLSGLVCAIAGWALI 274

Query: 251 ASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
                ISP+  +F     + ++VI      GG  S+  +     I+              
Sbjct: 275 GRIGAISPNSGQFENINSITAVVIGGISLFGGRGSILGMIFGAMIVGVFTLGLNMYGTDP 334

Query: 306 FNSLLKFDCSFNMRHTT 322
             + L       +    
Sbjct: 335 QWTYLMIGALIIVAVAV 351


>gi|84516998|ref|ZP_01004355.1| high-affinity branched-chain amino acid transport system permease
           protein livh / high-affinity branched-chain amino acid
           [Loktanella vestfoldensis SKA53]
 gi|84509116|gb|EAQ05576.1| high-affinity branched-chain amino acid transport system permease
           protein livh / high-affinity branched-chain amino acid
           [Loktanella vestfoldensis SKA53]
          Length = 288

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 85/305 (27%), Gaps = 22/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    Y + A GL++  G   +++L        G Y   I  +   LS  L I V
Sbjct: 4   LITGILLGGTYALIAMGLNLQYGVARIMNLANGEVLVAGGYFAFIAYTSTQLSPVLTIFV 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A I+     ++ +  L+           +  +                         +F
Sbjct: 64  VAPIAFGLNWLIYVLMLQPLVSRAKNRGQLERDSILATF-------GLSFIGVGLMLSFF 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                  Y        +    +  ++ LWL R+    A R I     
Sbjct: 117 GGDYFSYSFLAVPVELLGNTYGANRVLSFVMAVVICGALYLWLNRSRAGLAIRAIATAPA 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           +   +   +      AFA+  A   + GA  +                +  + IVI+GG+
Sbjct: 177 SARLVGIDVKNLSALAFALGGAVTAVGGALISTYLTL--DASTGVVFTLKALIIVIMGGV 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +     A  +L  +  +   +                        +    ++L R   
Sbjct: 235 GDVRGTIVAALLLGVLETVVASLLDPGLTLAAA-------------YVMFLGILLFRPQG 281

Query: 339 LLRLR 343
           L   +
Sbjct: 282 LFGKK 286


>gi|148257399|ref|YP_001241984.1| putative sugar (D-ribose) ABC transporter permease [Bradyrhizobium
           sp. BTAi1]
 gi|146409572|gb|ABQ38078.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Bradyrhizobium sp. BTAi1]
          Length = 341

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 99/303 (32%), Gaps = 19/303 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           ++K D  L +L +V   ++ +          + +   Q+ ++ +F+   + V+   G + 
Sbjct: 1   MHKKDLSLLILILVVGTVVAVINPRFLLVGNLSNTANQVGMFGIFSIAEAFVIIVGG-IE 59

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      A+    ++ L     ++  +   +      A G++ G  + K R     +   
Sbjct: 60  LAVGSVIALLGVLFIDLIVNRDVNWMVAFALIIAGGIAIGIMHGTLTTKMRIQPFVVTLC 119

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +             I  G A  Y  D     G         +       +    + + +
Sbjct: 120 GL------------LIYRGAARYYTEDSTAGFGYGASFPTLEWLTAGRTNVLGFPLPHSV 167

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +  ++    L L R+     +  +  N++A            +SA+ +      +A  
Sbjct: 168 VALAIVAGIAWLVLHRSVYGRYFYAVGKNEEAARYSGIRSDRVVISAYVICGGLTALAAV 227

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGM 301
             A     ISP +      +  I+  +LGG        S+  +   T +L  +  L   +
Sbjct: 228 LIAMYTRSISPAVHGSFYELYAIAAAVLGGCSLRGGEGSIIGVVLGTILLQVLQNLVNLL 287

Query: 302 NFY 304
              
Sbjct: 288 GIP 290


>gi|307725603|ref|YP_003908816.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|307586128|gb|ADN59525.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
          Length = 349

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 92/285 (32%), Gaps = 11/285 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            VV  +   L   A  S   + ++ +Q+          + V+   G + L+     A+  
Sbjct: 39  LVVLIVAFSLASSAFFSVGNLMTVALQVTSIAYLGVAATCVI-ITGGIDLSVGSVLALSG 97

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
            +  +L          ++    + +    +      +   G    IATL M  + + + +
Sbjct: 98  VAAALLVKAGVPVPVAMLGGMLVGAACGWV--NGICVTRMGLPPFIATLGMMLVARGVAL 155

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +                L        S I    FP +       + Y ++ M  L  ++ 
Sbjct: 156 QITGARPVSGLGDAFGELGNGALFKISHIGPDGFPDT---VFPGIPYPVVIMVVLFVAVS 212

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L RT++      +  N +A       +   KL  + +S    G  G    +      P
Sbjct: 213 VLLSRTSLGRHIYAVGSNAEAARLSGVNVQGVKLFTYVLSGLLAGATGCVLMSRLVTAQP 272

Query: 259 DMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +     E   + S VI     +GG+ ++S  A    ++  +    
Sbjct: 273 NEGVMYELDAIASAVIGGTSLMGGVGTISGTAIGAFVIGVLRNGL 317


>gi|256371576|ref|YP_003109400.1| inner-membrane translocator [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008160|gb|ACU53727.1| inner-membrane translocator [Acidimicrobium ferrooxidans DSM 10331]
          Length = 336

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 100/301 (33%), Gaps = 36/301 (11%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           + + ++ YV  A G++++ G  G L       +  GAY+  +          L   +   
Sbjct: 50  LLVYMMGYVALAQGINVIYGFTGYLPFGYFGLFGAGAYASGLAIIHL-HVPALASVLVGG 108

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           +      ++ +P  + RG Y AIATL  +    +I+                        
Sbjct: 109 LGAVVVGLVLIPLFRLRGAYFAIATLAAALALADIVANPAL------------------- 149

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                        +        Y   + +  LS  +++WLR +      + IRD   +  
Sbjct: 150 -TSVTNGPDGLNLASAYSSGQFYVASIVLVGLSLIVVVWLRNSRFGLTLQAIRDEPYSAS 208

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRDRISPDMFKFSENIIVISIVILGGMTS 280
            +   +   +  A+ ++ A  GMAGA +   S       +F  +  ++ +   + GG+ +
Sbjct: 209 MVGVNVPMRRAVAWLIACAIAGMAGALYGWASSLFYPTAVFDVTTTVLALVFALFGGVGT 268

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L        +L  +  +                 S       +  +A+ +++L     L 
Sbjct: 269 LWGPTIGAVVLYALYAII--------------GVSDPQAFQLIYGLAIVVLVLFAPRGLA 314

Query: 341 R 341
            
Sbjct: 315 G 315


>gi|148558398|ref|YP_001257875.1| branched-chain amino acid ABC transporter permease [Brucella ovis
           ATCC 25840]
 gi|148369683|gb|ABQ62555.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ovis ATCC 25840]
          Length = 295

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 54/315 (17%), Positives = 111/315 (35%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    I    Y M + GL+I+ G L +++      Y +GA+   +L S
Sbjct: 4   IFGIPLQALLGQLLVGLINGSFYAMLSLGLAIIFGLLRIINFAHGAQYMLGAFVGYLLLS 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+S W  + ++ +I G  G I+   +L    +   +  L+ +     ++        G
Sbjct: 64  WLGISYWPALVLAPLIVGLGGAIIERVALSRLYNLDPLYGLLFTFGLALVIEGTFRYYYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            AG   A      G               F+    +  +V++   F+     L + +T +
Sbjct: 124 AAGQPYAVPPSLAG----------GRNLGFMFLPNYRAWVVVASLFVCLGTWLLIEKTKL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N     +    +       +A+ SA  G+AG   A         +   +  
Sbjct: 174 GAYLRAATENPTLVKAFGINVPLLLTFTYALGSALAGLAGIMAAPIYQV--SPLMGSNII 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+        +L     L                  +    + ++ +
Sbjct: 232 IVVFAVVVVGGMGSILGAIITGYVLGIAEGLTKVF--------------YPEASSIVVFV 277

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L+R   L  
Sbjct: 278 IMAIVLLVRPAGLFG 292


>gi|221068452|ref|ZP_03544557.1| inner-membrane translocator [Comamonas testosteroni KF-1]
 gi|220713475|gb|EED68843.1| inner-membrane translocator [Comamonas testosteroni KF-1]
          Length = 327

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/314 (13%), Positives = 100/314 (31%), Gaps = 18/314 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L    +       +     +I  + A GL++V G + +L+    +  A+GA+    +  
Sbjct: 23  PLVGSPSTWLTLTVAGLAMGMIVFIIASGLTLVFGLMDVLNFGHGVFIALGAFVATSVLG 82

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL--AIATLIMSEIFQNILIKWKPIT 144
             G           + +    M++ +      G      I   +  +  + ILI    + 
Sbjct: 83  VMGDWTGSDQLWRNLAAVFPAMLVAMLVAGAVGLAFERFIVRPVYGQHLKQILITMGGMI 142

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G+  I V      +   +   ++   +       E +  + +L    + A +   L RT
Sbjct: 143 IGEELIKVIWGPQQIPLPLPDAMKG-AWLLGDAAVEKYRVFAVLVGALVFAGLAWTLART 201

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            +    R    +++   +L   +    +  F   SA  G+ G  +   +  +        
Sbjct: 202 KLGLLIRAGVQDREMVEALGYRVRSLFIGVFVAGSALAGLGGVMWGLYQQNV-IPQMGAQ 260

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
            N+++  ++I+GG+ S         ++  +      +                       
Sbjct: 261 VNVLIFIVIIIGGLGSTGGALIGALLVGLMANYTGFL--------------VPKVALFSN 306

Query: 325 VIALFLVILMRSHS 338
           +  +  ++L R   
Sbjct: 307 IALMVAILLWRPQG 320


>gi|218246416|ref|YP_002371787.1| inner-membrane translocator [Cyanothece sp. PCC 8801]
 gi|257059459|ref|YP_003137347.1| inner-membrane translocator [Cyanothece sp. PCC 8802]
 gi|218166894|gb|ACK65631.1| inner-membrane translocator [Cyanothece sp. PCC 8801]
 gi|256589625|gb|ACV00512.1| inner-membrane translocator [Cyanothece sp. PCC 8802]
          Length = 288

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 82/279 (29%), Gaps = 13/279 (4%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
           + + I +  +   I  + A GL++  G L L +        +GAY   +         + 
Sbjct: 3   TPQLIFNGLVVGSIIALTAVGLTLTYGILRLSNFAHGDFMTLGAYLTWVAKISGFNLGFS 62

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
           +I        +  +   L     R       TLI+  I   + ++   +           
Sbjct: 63  MILGGIGTIISMIIAEYLLWKPMRDRKATSTTLIIISIGLALFMRNGILLIWGGNNQNYQ 122

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                 T    L                   V+        ++ L L++T I  A R + 
Sbjct: 123 LPLVPATEFLGLKLAQDK-----------LLVMGLAIVAIIALHLLLQKTKIGKAMRAVA 171

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           DN          +    L  + ++ A   + GA +             +   + + + VI
Sbjct: 172 DNIDLARVSGINVENVVLWTWIITGALTALGGAMYGLIYTL--KPTMGWFLILPMFASVI 229

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           LGG+ +         I+    EL   + +      L   
Sbjct: 230 LGGIGNPYGAIAGGLIIGIAQELSVSIPWLGSEYKLGVS 268


>gi|149194942|ref|ZP_01872035.1| abc transport system permease protein [Caminibacter mediatlanticus
           TB-2]
 gi|149134863|gb|EDM23346.1| abc transport system permease protein [Caminibacter mediatlanticus
           TB-2]
          Length = 313

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 88/308 (28%), Gaps = 17/308 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG-----SRYGLSIW 93
           + +      +Y + A G ++V G L L++        +GA+   I        ++     
Sbjct: 10  VVNGFSLGSMYALIAIGYTLVYGVLRLINFAHGDIMMVGAFLAFIFMGLLTGWQFNNITI 69

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
            +   +  +S      +G+ +       L         +    +     + +    I   
Sbjct: 70  SIFITAVGLSIVLTSFVGVLTYLIAYKPLLDKGAPKISLLITAIGISFFLESLFNVIANQ 129

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                  +               +   I    V +    L   ++  L +T +  A R +
Sbjct: 130 YLGGNYQSFYFPKFFSQILHIGGITVPILTLIVPIMTLLLLGVVLFILYKTKVGIAIRAL 189

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             +      +           F + SA   + G  +A +   I P M      +   +  
Sbjct: 190 AFDIHTVKLMGADSNKIIAFVFILGSALAAIGGVSYAMAYPSIDPYM-GVLVGLKAFAAA 248

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ++GG+ S++       IL  V     G           F             I L  V+L
Sbjct: 249 VVGGIGSVTGAVIGGFILGFVEVAIPGFLPELGGWKDAFA-----------FILLIFVLL 297

Query: 334 MRSHSLLR 341
            +   ++ 
Sbjct: 298 FKPTGIMG 305


>gi|114705613|ref|ZP_01438516.1| sugar ABC transporter, permease protein [Fulvimarina pelagi
           HTCC2506]
 gi|114538459|gb|EAU41580.1| sugar ABC transporter, permease protein [Fulvimarina pelagi
           HTCC2506]
          Length = 356

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 83/300 (27%), Gaps = 18/300 (6%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      S   +  +  Q+ I  + A   S+V+ + G + L+      + +     L   
Sbjct: 61  VVSPNFFSAFNLSLIMQQVAIVGILAAAQSLVILTAG-IDLSVAAVMMMISVIMGRLSVE 119

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
            G+ + + I +  +     G + GL   K +                   +    I    
Sbjct: 120 VGMPVPISILIGLLCGAGTGALNGLLVTKVKLPPFITT------------LGTWNIFLAL 167

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
              +         T          F   F +    + + ++ M  +   +   L RTA  
Sbjct: 168 NYYFSNRETIRSQTLDAEAPLLKLFGERFNLGGAVLTWGVVLMVVIFGVLWFVLNRTAFG 227

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                I D+++A            ++ + ++     +A          ISP  F  +   
Sbjct: 228 RHIYAIGDDKEAADLSGIRTDRTLVAVYVLAGVICAIAAWASIGRVGSISPQSFFEANLE 287

Query: 268 IVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++VI      GG  S+        I+                 L        +    
Sbjct: 288 SITAVVIGGISLFGGRGSILGPLIGAIIVGVFNSGLRLAGVDVLWQLFATGWLIIVAVAI 347


>gi|15600052|ref|NP_253546.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|218893954|ref|YP_002442823.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254238420|ref|ZP_04931743.1| hypothetical protein PACG_04561 [Pseudomonas aeruginosa C3719]
 gi|9951131|gb|AAG08244.1|AE004899_5 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|126170351|gb|EAZ55862.1| hypothetical protein PACG_04561 [Pseudomonas aeruginosa C3719]
 gi|218774182|emb|CAW29999.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 317

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 83/288 (28%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++   +       + +  +++      +       
Sbjct: 44  ITYGLLGVINMAHGEMLMLGAYSTYVVQLLFQRLAPEWLALYPLLALPVAFCVSAAIGMA 103

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +      +     + +         +
Sbjct: 104 LER--TVIRHLYGRPLETLLATWGISLVLIQLVRMLFGAQNVEVANPAWLSGGIQVLPNL 161

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L RT +    R +  N+              + AF +
Sbjct: 162 VLPWNRIVIIGFALFVLLLTWLLLNRTRLGLNVRAVTQNRNMAACCGVPTGRVDMLAFGL 221

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+             I    +V+LGG+  L+    A   L    ++
Sbjct: 222 GSGIAGLGGV--ALSQVGNVGPDLGQGYIIDSFLVVVLGGVGQLAGSVLAAFGLGVANKI 279

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                    L++  + L I  R   L  L+  
Sbjct: 280 LEPQIGAVLGK-------------ILILALIVLFIQKRPQGLFALKGR 314


>gi|311109600|ref|YP_003982453.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310764289|gb|ADP19738.1| inner-membrane translocator 71 [Achromobacter xylosoxidans A8]
          Length = 336

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 44/301 (14%), Positives = 97/301 (32%), Gaps = 18/301 (5%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     +I  + A G+++V G + +L+    +  AIGAY    +               
Sbjct: 45  LAGLAMGMIIFIVASGMTLVFGLMDVLNFGHGLFIAIGAYMAATVLGAMADWTQSGSLWI 104

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATL--IMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            + +    MI+G+      G       +  +  +  + ILI    +  G+  I +     
Sbjct: 105 NLGAVLPAMIVGMLVAGAVGLAFERVIVRPVYGQHLKQILITMGGMIIGEEIIKMLWGPQ 164

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   +   +R   F       E F    LL    +   ++  L RT +    R   +++
Sbjct: 165 TISLPLPEALRG-AFLLGDAAIEKFRIVALLTGLLVLGGMLWLLNRTKLGLLIRAGVEDR 223

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +   SL   I    +  F   S   G+ G  +   +  I         N+++  ++++GG
Sbjct: 224 EMVESLGYRIRHLFVGVFVAGSMLAGLGGVLWGMYQQSI-VPQLGAQVNVLIFIVIMIGG 282

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S         ++  +      +                       +  +  ++L R  
Sbjct: 283 LGSTVGCLIGALLVGLMANYTGFL--------------LPKAALFSNIALMVAILLWRPQ 328

Query: 338 S 338
            
Sbjct: 329 G 329


>gi|53721022|ref|YP_110008.1| putative branched-chain amino acid ABC transporter permease
           [Burkholderia pseudomallei K96243]
 gi|67643073|ref|ZP_00441822.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia mallei GB8 horse 4]
 gi|76811503|ref|YP_331613.1| branched-chain amino acid ABC transporter permease [Burkholderia
           pseudomallei 1710b]
 gi|121599165|ref|YP_994653.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei SAVP1]
 gi|124384093|ref|YP_001027586.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei NCTC 10229]
 gi|126441872|ref|YP_001060982.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 668]
 gi|126449920|ref|YP_001082516.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei NCTC 10247]
 gi|126452969|ref|YP_001068282.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 1106a]
 gi|134281490|ref|ZP_01768198.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 305]
 gi|167001271|ref|ZP_02267070.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei PRL-20]
 gi|167721845|ref|ZP_02405081.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei DM98]
 gi|167740815|ref|ZP_02413589.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 14]
 gi|167818030|ref|ZP_02449710.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 91]
 gi|167826393|ref|ZP_02457864.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 9]
 gi|167847912|ref|ZP_02473420.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei B7210]
 gi|167896469|ref|ZP_02483871.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 7894]
 gi|167904871|ref|ZP_02492076.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei NCTC 13177]
 gi|167913149|ref|ZP_02500240.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 112]
 gi|167921086|ref|ZP_02508177.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei BCC215]
 gi|217423831|ref|ZP_03455331.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 576]
 gi|226193113|ref|ZP_03788723.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|237814368|ref|YP_002898819.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia pseudomallei MSHR346]
 gi|242316647|ref|ZP_04815663.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 1106b]
 gi|254174659|ref|ZP_04881320.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei ATCC 10399]
 gi|254184044|ref|ZP_04890635.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 1655]
 gi|254186508|ref|ZP_04893025.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254194724|ref|ZP_04901155.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei S13]
 gi|254201518|ref|ZP_04907882.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei FMH]
 gi|254206856|ref|ZP_04913207.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei JHU]
 gi|254260026|ref|ZP_04951080.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 1710a]
 gi|254298684|ref|ZP_04966135.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 406e]
 gi|254357410|ref|ZP_04973684.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei 2002721280]
 gi|52211436|emb|CAH37427.1| putative branched-chain amino acid ABC transporter permease
           [Burkholderia pseudomallei K96243]
 gi|76580956|gb|ABA50431.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia pseudomallei 1710b]
 gi|121227975|gb|ABM50493.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei SAVP1]
 gi|124292113|gb|ABN01382.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei NCTC 10229]
 gi|126221365|gb|ABN84871.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 668]
 gi|126226611|gb|ABN90151.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 1106a]
 gi|126242790|gb|ABO05883.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei NCTC 10247]
 gi|134247157|gb|EBA47243.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 305]
 gi|147747412|gb|EDK54488.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei FMH]
 gi|147752398|gb|EDK59464.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei JHU]
 gi|148026474|gb|EDK84559.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei 2002721280]
 gi|157808652|gb|EDO85822.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 406e]
 gi|157934193|gb|EDO89863.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|160695704|gb|EDP85674.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei ATCC 10399]
 gi|169651474|gb|EDS84167.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei S13]
 gi|184214576|gb|EDU11619.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 1655]
 gi|217392894|gb|EEC32916.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 576]
 gi|225934713|gb|EEH30690.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|237503708|gb|ACQ96026.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia pseudomallei MSHR346]
 gi|238524321|gb|EEP87754.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia mallei GB8 horse 4]
 gi|242139886|gb|EES26288.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 1106b]
 gi|243062894|gb|EES45080.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia mallei PRL-20]
 gi|254218715|gb|EET08099.1| putative amino acid uptake ABC transporter, permease protein
           [Burkholderia pseudomallei 1710a]
          Length = 294

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 106/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +  +     +    +    Y + + GL+++ G L +++      + +GA    +  +
Sbjct: 3   IFGIPVSAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLN 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL  W ++ ++ ++ G  G+++    L++      +  L+++     ++        G
Sbjct: 63  YLGLPYWAMLVLAPVVVGLFGILIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRAIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 123 SSGQPYDVPALLEGAT----------NVGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMVTLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  V  L                  +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSIVTGLMLGVVEGLTRVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L+R   L  
Sbjct: 277 IMAIVLLIRPAGLFG 291


>gi|226362517|ref|YP_002780295.1| ABC transporter ATP-binding/permease protein [Rhodococcus opacus
           B4]
 gi|226241002|dbj|BAH51350.1| putative ABC transporter ATP-binding/permease protein [Rhodococcus
           opacus B4]
          Length = 831

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/318 (11%), Positives = 91/318 (28%), Gaps = 27/318 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL-LSLNC 70
             IL L  V+  ++         + +    +   +     FA    +V+   G+ LS+  
Sbjct: 525 AAILALATVLLAIVAISQSEFYLTSRNFGLILPLLATLAFFAMAQQVVMMIGGIDLSVGP 584

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           +    +   S+V+   +  + + + + V A+++   G++    ++  + + L    +  +
Sbjct: 585 LAGLLVVVGSFVLSAYKTPIGMIIGLVVLAIVAAVVGLVNWTLAVVVKINPLIATLVTYT 644

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            I                GI    R    G        +      FV   + +  ++   
Sbjct: 645 AI---------------QGIAYLLRPLPAGKIDPVFTSYASTKLGFVPIMLVVAIIVA-- 687

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 + + + RT      R           +     +  L+A+   S  I  A     
Sbjct: 688 ----VLLEVAMYRTMFGVRLRATGSQHATADRIGVRTKWITLAAYVSCSVLIVPAAVLLM 743

Query: 251 ASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A     +  +        + + V     I GG  S         ++I +  +   +    
Sbjct: 744 AQAGTGNASIGDSYTLASIGAAVLGGASIFGGRGSFIGACLGAVLVIQINTVVQFIGLPL 803

Query: 306 FNSLLKFDCSFNMRHTTL 323
           +                 
Sbjct: 804 YWQQWLLGGLTIAAAAFY 821


>gi|331697518|ref|YP_004333757.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326952207|gb|AEA25904.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 296

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 109/309 (35%), Gaps = 20/309 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +   +Y +F+ GL+++ G   +++        +G Y  V+L +  GLS  + I  
Sbjct: 8   LVSGILVGGLYGLFSSGLTLIFGITRVINFAHGDFVTLGMYGAVLLFASLGLSPLIGIIP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A++S   G I+    ++       I+ +        + +    + +    ++       
Sbjct: 68  VAILSFLIGAIVYRVIVRRTLSVKGISAIDAQHGQLVLTLAVSILISNLLLMFFGPSPRA 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + ++   F           F+  +++        + + L+RT    A R   D++ 
Sbjct: 128 VQGVLPAVYEVFGVYIQQARLVSFLIALVVF-----LLLYIALQRTLYGKAIRATVDDRD 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +          +F+V     G+AG   A            F   II    V++GG+
Sbjct: 183 MASMVGIDPNKVYAVSFSVGIMLTGIAGCVLATYYPVTPTTGAGFL--IIAFVTVVMGGL 240

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++     A  ++  + ++           +              + +A  LV+++R   
Sbjct: 241 GNIVGAFVAGLLVGIIQQVTAIYVAVDLQDVG-------------LFLAFVLVLVLRPQG 287

Query: 339 LLRLRTPSN 347
           +L  R  S 
Sbjct: 288 ILSGRKASA 296


>gi|317403037|gb|EFV83574.1| hypothetical protein HMPREF0005_02992 [Achromobacter xylosoxidans
           C54]
          Length = 283

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 98/304 (32%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     LIY   A GL+++ G   +++        +G Y+   L +   +   L  P+
Sbjct: 5   LSAGLFNGLIYAAVAVGLALIWGITDVINFAHGEFLMLGMYAAYWLYTLGHIDPTLSAPL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A++    G +     +K      A+A ++ +     +L +   I               
Sbjct: 65  VAIVLAFVGFLTYALIIKRLQKGPAMAVILATFGLGLVLRQLAFIAFSPD---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              ++   +       + V          L    + A++ + + RT   +A + + ++++
Sbjct: 115 -YRSLPDTLVSGSVTLAGVSLGRPQVVTGLVALVVVAALFVLVYRTRWGHALQAVAEDRQ 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +  +        + + SA +G+AGA                   ++    V +GG 
Sbjct: 174 VAALVGISPDRVNAQVWMLGSAAVGLAGALLTTFFYV--FPSVGTVFGLLAFVAVCMGGF 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL     A  ++  +  +          ++  F             I   LV+  R   
Sbjct: 232 GSLPGAFIAGILIGIIEAMTGYFVAPALKTVSVF-------------ILFILVLWYRPRG 278

Query: 339 LLRL 342
           L   
Sbjct: 279 LFGR 282


>gi|331695234|ref|YP_004331473.1| polyamine-transporting ATPase [Pseudonocardia dioxanivorans CB1190]
 gi|326949923|gb|AEA23620.1| Polyamine-transporting ATPase [Pseudonocardia dioxanivorans CB1190]
          Length = 940

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 58/323 (17%), Positives = 123/323 (38%), Gaps = 22/323 (6%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+  LL+      T +        I  L   + A  L ++ G +G +SL          
Sbjct: 329 LVIAALLVGGVALVTLTDGSYRFGVINSLALSLIALSLVVLTGMVGQISLAQAGLAGAAG 388

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
                LG+       L + + A+++   G+++GLP+L+ RG  LA+ TL  + + Q  ++
Sbjct: 389 LVVSKLGTHLP--FPLPMIIGALVAMVIGVLIGLPALRIRGAQLAVVTLAAAVVVQQFVL 446

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
             +   + +  I                           I  +    ++L +  ++  ++
Sbjct: 447 GNRLFVSTENAIPDPQLFGLDL----------GVREGTTIARVPFGLLVLAVVAVTFVLV 496

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             + R+        +R N++A  S+   +   KL+AFA++S   G+ G     SR  +S 
Sbjct: 497 CNVIRSGTGRRMLAVRSNERAAASVGINVSAVKLTAFALASFLAGLGGTLIGYSRGVLSV 556

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           + F     + ++++  +GG+ S S    A A+    +             +L  +     
Sbjct: 557 ESFGVLVGLSILAVAYIGGIASASGAFVAGAMGAVGIVFV----------ILDRNLDLGP 606

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
            ++ +  + L L +L     +  
Sbjct: 607 YYSVITGLGLLLAVLFNPLGVAG 629



 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/276 (11%), Positives = 85/276 (30%), Gaps = 4/276 (1%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            +Y   A  +++     G+++        +  Y Y  L +         +P   +     
Sbjct: 16  AVYASMALSITLTYQGSGVINFAAGAMATVPLYVYDDLRNGLFSLPLPGVPSMEVGEQPV 75

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT---V 163
            + + L         L +  LI   + +  ++       G      A      G+    +
Sbjct: 76  WLAILLGIAVAAVLGLLVEVLISRPLRRAPVLAKVVAAVGVMLTIQACVALKFGSDARSL 135

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
            +++       + +       +    +     ++ +W RR+ +  A +   +NQ+A    
Sbjct: 136 TAVLPTGTMRIAGIQVPTDRLWFAGIVVLAGVALAIWFRRSRVGLAVQAAAENQRAAEFA 195

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
             +     +  + VSS F+ ++      +   ++P        +  ++  ++G M+SL  
Sbjct: 196 RLSPNVLGIVTWVVSSVFVALSMILAGPAIGVLTPGNMTLLV-VPALAAALIGRMSSLWA 254

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                  +  +V     ++                 
Sbjct: 255 ALAGGLAMGVLVAELQFLSQTKTWWPEWAKQGLTDA 290


>gi|254504916|ref|ZP_05117067.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222440987|gb|EEE47666.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 290

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 102/310 (32%), Gaps = 27/310 (8%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y+    +   IY + A G++++   L    L       +GA+  + + +  G+S  
Sbjct: 6   LLNFYVIPGIVLGSIYALGAVGITLIFAILRYAHLAHGDLATLGAFIALAVVTTLGVSPL 65

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             +PV+ + + A  + +         +   I T++ S     ++     +  G      +
Sbjct: 66  AALPVAIIATAAVAVGIDKVFYDHLRERPKIVTVMASLGIALMIRAVVQVVWGVDTETYS 125

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             +          IR                Y ++ M  L   + ++L ++    A R +
Sbjct: 126 RGIVRPENYFGLRIRDREI------------YTVIAMLALVGVLHMFLTQSKWGKAMRAM 173

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            DN               +  + ++      +G F   + +     M  +   + + +  
Sbjct: 174 SDNPNLALLSGIDNRKVVILTWVIAGGLCAASGFFLGLNTEL--KSMMGWHMLLPMFAAA 231

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ILGG+  +        I+    EL   +    + + + F               L  ++L
Sbjct: 232 ILGGVGRVEGAVLGGLIVGIAEELSVLVIPSEYKAAMAF-------------AILLFMLL 278

Query: 334 MRSHSLLRLR 343
           +R   LL+ +
Sbjct: 279 VRPTGLLKGK 288


>gi|239820627|ref|YP_002947812.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239805480|gb|ACS22546.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 285

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 92/302 (30%), Gaps = 27/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A GL++V G L + +      Y  GA+    L S    + WL +  
Sbjct: 6   ILNGLTLGSVYCLVALGLTLVYGILQVPNFAHGAFYMAGAFVAFQLMSALSWNYWLAMLA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A    A   + G            +  +I +      L        G     +      
Sbjct: 66  AAASVAALAALAGRWVFHPLRKSSGLHPMIAAIGLLLFLEASAQAIWGADFRRMPTPYTG 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +               + +        ++ G   L A++ L+L+RT +      +  N++
Sbjct: 126 M------------VEVAGIGIGQQRVLLVAGAFVLVAALQLFLKRTVVGATIVALAQNRE 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        +  FA+S A    A   +A     +              +I+++GGM
Sbjct: 174 GAALMGIDTHRVAMLTFAISGALAAAAAVLYAP--INLVYPAMGSLVITKAFAIIVIGGM 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+                 L+ F             + L +++ +R   
Sbjct: 232 GSVPGAIAGGLIIGFAESFGAFYVSSDAKDLIAF-------------VLLVVILSVRPQG 278

Query: 339 LL 340
           L 
Sbjct: 279 LF 280


>gi|239817967|ref|YP_002946877.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239804544|gb|ACS21611.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 309

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 97/305 (31%), Gaps = 16/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y + A G  ++  + G+ +          A +       +         V A I
Sbjct: 12  LMVGMLYSLIAIGFVLIYKASGVFNFAQGAMVLFAALAMARFAEWFPQWFGFESQVLANI 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN----GKAGIYVADRLYF 158
                 +  +  + +  + LA++ L+  E    ++            G+           
Sbjct: 72  LAFIAAMGVMVIVAWLIERLALSKLVNQEGITLLMATLGIAYFLDGVGQTIFGNDIYKID 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G     L+         ++         L    L   + ++ ++TA   A R + D+ +
Sbjct: 132 VGMPKEPLMVLQGTFQGGLLLSQEDLVAALVAAGLVVVLAVFFQKTATGRALRAVADDHQ 191

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +    +  ++V+     +AG  + +               +  + +VILGG+
Sbjct: 192 AAQSIGIPLKRIWVIVWSVAGFSALVAGVIWGSKLGVQFSLS---LVALKALPVVILGGL 248

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        ++    +L            ++   +          +   + +L+R   
Sbjct: 249 TSIPGAIIGGLLIGVGEKLSEIYLGPMLGGGIEIWFA---------YVLALVFLLVRPQG 299

Query: 339 LLRLR 343
           L   +
Sbjct: 300 LFGEK 304


>gi|332703430|ref|ZP_08423518.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332553579|gb|EGJ50623.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 313

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 14/234 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
             +G  G  SL       +GAY  V+    +  +  L++   A+ +   G  +  P  K 
Sbjct: 56  FCLGLGGQASLAQGAFCGLGAYFSVLAHQAWPEASPLILACVALSAWGIGFGLSYPMEKL 115

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
              +LA+ATL +S IF N+ +    IT G  G+ V   L  LG  +R             
Sbjct: 116 GEGFLAMATLGLSLIFTNLAVSLSSITGGPDGMLVTTPLSILGLNLRGD----------- 164

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
              I  YYV L +      + L LR + +  A    + +  A  +        +  +F +
Sbjct: 165 ---IAHYYVFLALLAGGLYLFLALRHSRLGRALLACKSDPMAAAACGIRRPAVRSLSFGL 221

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
            +A   +AGA +A     ISP  F    ++  +  +++GG  +  +   A   L
Sbjct: 222 GAALSALAGAVYAPYGGFISPGEFDLELSLKTLLYLVIGGPGNPVRPILAVLGL 275


>gi|317126247|ref|YP_004100359.1| inner-membrane translocator [Intrasporangium calvum DSM 43043]
 gi|315590335|gb|ADU49632.1| inner-membrane translocator [Intrasporangium calvum DSM 43043]
          Length = 287

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 90/303 (29%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   IY + A G++++ G L +          +GAY    L     L+ W+ +  
Sbjct: 8   LANGVMLGSIYALVAAGVALIFGVLHIPQFALGAQAMLGAYLVFTLSVSMSLNYWIALAA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+I    G +          +  +I   I +     +L     I  G +          
Sbjct: 68  AAVIMAVFGAVAHRVVFDPIRNAPSINAFISAFGLVLVLESGAQIIWGSS---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V S +                  +++    +  ++   +RRT + +  R +  N  
Sbjct: 118 -YKRVPSPLGGETITILGASLTAQRLLIIVVALIIVLALHTTIRRTTLGSTIRAVAQNPT 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +            A+ SA    AG   A                I    I ILGGM
Sbjct: 177 GAAVVGINPRAVATLTMAIGSAVAATAGGLIAPISSV--FPSLGAFLIIKAFVITILGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +       I   V  L  G     +     F             + L LV+ MR   
Sbjct: 235 GSFTGAIAGGFIFGIVEALGAGYVSVEYKDAFGF-------------VILVLVLAMRPQG 281

Query: 339 LLR 341
           L  
Sbjct: 282 LFG 284


>gi|254788091|ref|YP_003075520.1| urea ABC transporter permease UrtB [Teredinibacter turnerae T7901]
 gi|237683558|gb|ACR10822.1| urea ABC transporter, permease protein UrtB [Teredinibacter
           turnerae T7901]
          Length = 308

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 97/304 (31%), Gaps = 17/304 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   ++V+ A GL+I+ G +G++++       +GAY   ++ + +   +  L  +   I
Sbjct: 22  LILFSVFVLMALGLAIIFGQMGVINMAHGEFMILGAYVTYLISNLFSEYMPALFGIYFFI 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +             F      +   +       +L  W      +           +G +
Sbjct: 82  AMIAAFFTAGALGAFVEWA--MIRHLYKRPLDTLLATWGLSLIMQQLYRTVFGAREVGVS 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +      +  +   I   +V+     +S S+ L + ++      R +  N+    +
Sbjct: 140 LPDWLMGSIPMTDTIDIPINGLFVMGLTIVISVSVYLLMFKSRWGGQVRAVVQNRPMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +      +    FA+  A  G+AG+ F       +         +    +V+ GG  SL 
Sbjct: 200 VGINTEKSDRMTFALGCAIAGVAGSAFTMIGS--TGPTAGQLYIVDTFLVVVFGGAQSLL 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++ +  ++++R   L  L
Sbjct: 258 GTIASAFTISQAQSTMEFFLSGSMAK-------------VLTLLVVVGILMLRPQGLFAL 304

Query: 343 RTPS 346
           +   
Sbjct: 305 KIRH 308


>gi|306841191|ref|ZP_07473907.1| hypothetical protein BIBO2_0972 [Brucella sp. BO2]
 gi|306288817|gb|EFM60135.1| hypothetical protein BIBO2_0972 [Brucella sp. BO2]
          Length = 287

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 94/303 (31%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A GL++V G L +++L       +G Y   ++ + +G+  ++ +  
Sbjct: 8   VINGILLGGLYAIMAQGLALVWGVLNIVNLAHGTMIMLGGYVTWLVFANFGIDPFIGVFA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A      G  +    L           L+++   + I               +      
Sbjct: 68  AAAAMFCFGYALQRCVLNLVARGPMFNALLITFGIEIIFTDVAQHVFSADFRAIIPSYSA 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +            F    +   +      +    +S  +  ++  T +  A R    N  
Sbjct: 128 VN-----------FNVYGITIPLMNLLAFIAAFVVSGFMFFFMMTTKLGRAIRATAQNLT 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A               F +  A  G+AG  +A                    +I I+GG+
Sbjct: 177 AARLYGVEPRHLYAVTFGIGVAIAGVAGGLYATVNQL--NPYIGVPLTAKSFAITIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +   +     IL  +  L        + +++ F               L LV+++R   
Sbjct: 235 DNPLGVILGGLILGVIESLTVLYLGDTYRNVVSFS-------------ILVLVLIIRPGG 281

Query: 339 LLR 341
           LL 
Sbjct: 282 LLG 284


>gi|210632491|ref|ZP_03297419.1| hypothetical protein COLSTE_01321 [Collinsella stercoris DSM 13279]
 gi|210159586|gb|EEA90557.1| hypothetical protein COLSTE_01321 [Collinsella stercoris DSM 13279]
          Length = 550

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/299 (10%), Positives = 87/299 (29%), Gaps = 11/299 (3%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL-LSLN 69
           Y  IL + A +      +      + + + ++  Q    +  A G++ ++   G  LS+ 
Sbjct: 227 YIAILLVFAGLCVAAPIVKGTNLLTPQNLLNILQQASPRMFLALGVAGLILQTGTDLSIG 286

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
            ++  ++ A + ++       +I+ +    + I     ++M L        + +      
Sbjct: 287 RMVGMSMVASTVIMHQGPNTGTIFGVAYDFSGIPVVGRIVMALVVCVALCTFFSAIAGFF 346

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +  F+               + +   + +    V         PS           ++L 
Sbjct: 347 TARFKMHWFVSTM----ANMLVIFGLVTYATKGVSFGAIDPTIPSMVTPKINGFPTIILW 402

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
                A +     +T        +  N +A       +    + AF ++    G      
Sbjct: 403 AIAAIAIVWFIWNKTTFGKNMFAVGGNPEAAAVSGINVFAVSIGAFLLAGVLYGFGSWLE 462

Query: 250 AASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMN 302
                      +     +  I+  ++      GG+  +S +     I   +      + 
Sbjct: 463 CIRMVGSGSAAYGQGWEMDAIAACVVGGISFTGGIGKISGVTVGVLIFTALTYALTILG 521


>gi|218515877|ref|ZP_03512717.1| Monosaccharide-transporting ATPase [Rhizobium etli 8C-3]
          Length = 321

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 96/303 (31%), Gaps = 23/303 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R++  +  + +  V+  +          + +    + +QI I  + A G++ V+   G 
Sbjct: 21  IRISMKEAGVAIALVLIVIFFSATAPYFATPENFLKIFVQIAINTVLASGMTFVILVGG- 79

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+       +     LS W  I ++++ S   G I+G  +           
Sbjct: 80  IDLSVGSLLALCTVIGATIMIDPRLSPWAAIVLASLASMGTGAILGAINGWV-------- 131

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                    + ++    +        V      +    +  + F       +   IF+  
Sbjct: 132 --CEKWKLPSFIVTLGMLNVASGLARVVSDNSTITGLPQPFVDFGNLIFWGIFPSIFLIA 189

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +++ +           R T        I  N++A           K++ F +S    G+A
Sbjct: 190 IVVVLVGWFVL-----RYTVFGRFVFAIGTNEEAVRLSGHEPKRYKIAVFTISGLTAGIA 244

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCC 299
              +    + +   +      +  I+ VI+GG        S+        IL  +     
Sbjct: 245 AMVYLLRLN-VGSPVAGIGYELNAIAAVIIGGTSLSGGKGSIVGTLVGACILQVLSTGLQ 303

Query: 300 GMN 302
            + 
Sbjct: 304 LLG 306


>gi|158339065|ref|YP_001520242.1| branched-chain amino acid ABC transporter permease [Acaryochloris
           marina MBIC11017]
 gi|158309306|gb|ABW30923.1| branched-chain amino acid ABC transporter, permease protein
           [Acaryochloris marina MBIC11017]
          Length = 325

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 94/284 (33%), Gaps = 19/284 (6%)

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
           +I  G + +++L       +GAY   +    + L + L IP++ +I+   G ++ +  ++
Sbjct: 55  AITFGVMRIINLAHGEFIMLGAYVTFVFQDAFQLDLLLTIPLAFLITALIGAVVEITIIR 114

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
                     L    +   +    K I   +     A         + S        ++ 
Sbjct: 115 RLYGNPLETLLATWGLSIVMQGVVKLIFTAQLKYVKAPAYLSGNIPLVSDEN----GAAV 170

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
           V    +  +++     L    +     T+     R +  N+     L        +  FA
Sbjct: 171 VAISYYRLFIVGVALALLGLTLYLFYGTSWGRQIRAVTQNRDMAMCLGVNTKLVDMGTFA 230

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
                 G+AGA  +A +    P    +   +    +V+ GG+  L  I   + ++     
Sbjct: 231 YGCGLAGVAGAVISALKSVAPPMGQDYL--VDAWMVVVTGGVDKLIGILAGSLLIG---- 284

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                     N+++ F  +  +    ++   + L+   R   L 
Sbjct: 285 --------EANAIIAFLLNDPLARVIVLGAVIVLI-RYRPEGLF 319


>gi|59712053|ref|YP_204829.1| ribose ABC transporter permease protein [Vibrio fischeri ES114]
 gi|197334691|ref|YP_002156261.1| ribose transport system permease protein RbsC [Vibrio fischeri
           MJ11]
 gi|59480154|gb|AAW85941.1| ribose transport system permease protein RbsC [Vibrio fischeri
           ES114]
 gi|197316181|gb|ACH65628.1| ribose transport system permease protein RbsC [Vibrio fischeri
           MJ11]
          Length = 328

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/301 (9%), Positives = 77/301 (25%), Gaps = 25/301 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
                  +   I ++  Q  +  + A G+++V+ + G + L+     A+       +   
Sbjct: 42  FLNDNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLALCGAFAATMIGL 100

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
               +  +       +    +   + +                + F   L+    +    
Sbjct: 101 EIPVMIAVPTALLAGAALGAISGIIIAK------------GKVQAFIATLVTMTLLRGVT 148

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                   +    T V     +F    +  I       V++               T   
Sbjct: 149 MVYTEGRPISTGFTDVADSFAWFGTGYALGIPVPIWLMVIVFASVWYLL-----NHTRFG 203

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N+ A       +   K+  +A+      +AG    +      P        +
Sbjct: 204 RYVYALGGNESATRLSGINVDRVKIGVYAICGLLAALAGLIVTSRLSSAQPTA-GMGYEL 262

Query: 268 IVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             I+ V+LGG         +        I+  +      ++   +  ++       +   
Sbjct: 263 DAIAAVVLGGTSLAGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAVL 322

Query: 322 T 322
            
Sbjct: 323 V 323


>gi|84686478|ref|ZP_01014371.1| putative permease abc transporter protein [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84665391|gb|EAQ11868.1| putative permease abc transporter protein [Rhodobacterales
           bacterium HTCC2654]
          Length = 360

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/316 (12%), Positives = 88/316 (27%), Gaps = 18/316 (5%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
              + +L     +   +      S   +  +  Q+ I  + A   S+V+ + G + L+  
Sbjct: 49  MVPVIVLVASVIIFGLIAGERFFSPFNLSLILQQVSIIGILAAAQSLVILTAG-IDLSVA 107

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               + +     L    G+   L + +        G++ G    K +        L    
Sbjct: 108 AIMVLMSVISGKLAVELGVPAPLALLIGFGGGIGAGLLNGFLVTKIKLPPFITT-LGTWN 166

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           IF  +++                +         +      F  +  +    + +  + M 
Sbjct: 167 IFYALML-----------WLSGAQSIRGEDIDNTAPLLKIFGQAISVGSARITFGSILMV 215

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            + A +   L +TA       I D+++A            +S +A++     +       
Sbjct: 216 IVFAVLWYLLNKTAWGRHVYAIGDDKEAAELAGIRTDRTLISVYALAGLVAAIGAWASIG 275

Query: 252 SRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
               ISP  F       + ++VI      GG  S+        I+               
Sbjct: 276 RVGSISPTSFYEGNLQSITAVVIGGISLFGGRGSILGALFGALIVGVFQSGLRLAQVDVL 335

Query: 307 NSLLKFDCSFNMRHTT 322
             +        +    
Sbjct: 336 WQVFAIGWLIIIAVAI 351


>gi|302186597|ref|ZP_07263270.1| inner-membrane translocator [Pseudomonas syringae pv. syringae 642]
          Length = 380

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 82/332 (24%), Gaps = 40/332 (12%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------------ 84
            +   +  + L     A G+ ++ G  G+LSL   I + +G+Y   +             
Sbjct: 52  DFRLGLAGKYLSLAFCAVGMVMIWGYGGILSLGQGIFFGLGSYMMAMYLKLEATATDEAA 111

Query: 85  ----GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                         +I  S              +       +  A L     +     + 
Sbjct: 112 SALAAFYGSALPDFMIWNSVEALPWWWKPFESATFTLAAILILPALLAFLFSYAYFKKRV 171

Query: 141 KPITNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             +                I            +      F            +Y +   +
Sbjct: 172 GGVYFSIITLSLASIMSIMIIGQQGYTGGVNGLTDFKTAFGLSLQTPQTPWILYLITTLL 231

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              S ++  ++ R+ +      IRD +             K   FAV++    + G  F 
Sbjct: 232 LLASVAMCGFILRSRLGKVIVAIRDREDRVRFSGYNTALFKAFIFAVAALISALGGVMFT 291

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                 SP +     +  ++    LGG  SL      T ++                   
Sbjct: 292 LQVGLASPSLVGIIPSTEIVIYAALGGRLSLVGAVYGTLLIGTAKTWLSE---------- 341

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +F       +      V+L     L  L
Sbjct: 342 ----NFVSFWQYFIGFLFMAVVLFLPTGLAGL 369


>gi|86136082|ref|ZP_01054661.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85826956|gb|EAQ47152.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 288

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 91/303 (30%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      +Y + A G  ++  +   ++        IGA+  + L +   +++   I  
Sbjct: 4   LVSGLANGCVYGLIALGFVLIYKATEAVNFAQGDFMMIGAFVSLGLTNAEHMNLPFWIAA 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              IS        L     R          +    Q  ++                    
Sbjct: 64  PLTISIMAVFGYLLDLFVLRH---------LFGQNQTAVVILTIAMGFVLRFIAGIIWGH 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+ S +         V+  +    +++    L+  +  + +RT +  A +    NQ 
Sbjct: 115 EPQTLESPLALGDLHIGGVVLGMADVAIIVVTFLLTWFLYQFFQRTKLGLAMQAASQNQM 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A + +   +   +   + +S A   +AG  FA+     + D       I   +  ++GG 
Sbjct: 175 AAYFMGIPVKRVQGLIWGLSGATAAVAGILFASK---GAIDPNAGLLGIKAFAAAVIGGF 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        I+  +           ++ +                  L  V++ R H 
Sbjct: 232 GSLPGALAGGLIVGVIEPFAARYLAAGYSQIAP-------------YALLLAVLIFRPHG 278

Query: 339 LLR 341
           L  
Sbjct: 279 LFS 281


>gi|84684177|ref|ZP_01012079.1| ABC transporter permease protein [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84667930|gb|EAQ14398.1| ABC transporter permease protein [Rhodobacterales bacterium
           HTCC2654]
          Length = 289

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 45/299 (15%), Positives = 102/299 (34%), Gaps = 15/299 (5%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           +  + A GL++V G L  ++L     Y IGA+      +    +  + + V+  ++G  G
Sbjct: 1   MLFLVASGLTLVFGILDFVNLAHASLYLIGAFICA-TLTFALGNFLIAVVVALPLTGLIG 59

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
             +     +   +   +  ++ +     +      +  G  GI V          +   +
Sbjct: 60  WAVERFVARPLYERDHLDHVLATFGLILVFETLAHLIWGPEGIAVP---------LPEFL 110

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
           +     S  +I   + + ++      +  +   +  T +    R    N+    +L   I
Sbjct: 111 QGQIVLSETLIIPSYRFLIIGAGLAAAGGLFWMVNFTRLGMLIRAGASNRTMVSALGINI 170

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
                  FA+ +   G+AG   A   +         S  I    ++I+GG+ S+     A
Sbjct: 171 EMLFGLVFAIGATLAGLAGMLVAPITEA--NIGMGNSIIITAFVVIIVGGIGSMKGAFVA 228

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDC---SFNMRHTTLMVIALFLVILMRSHSLLRLR 343
             ++  +  L        F   +       S       L+ I + +V+ ++   L   +
Sbjct: 229 ALLIGLIDTLGRSFLDDIFKIFMSPSAAENSAPAISAMLIYIIMAVVLALKPQGLFPPK 287


>gi|91976066|ref|YP_568725.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91682522|gb|ABE38824.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 288

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 94/304 (30%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       ++  + A GL++ +G +  ++L        G Y   +L ++ G   +  +P+
Sbjct: 7   LFDGVAYGMLLFVLACGLAVTLGLMNFVNLAHGAFAMAGGYVCAVLVNKMGWPFFAALPI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + S   G +      +   D   +  ++ S     + +       G +          
Sbjct: 67  AFLASALIGAVFERLLYRHLYDRSHLDQVLFSVGLVFMSVAAVDFIMGSS---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                       +     V    +   +++    L+ ++ L L +T   +  R   D+ +
Sbjct: 117 RVFIKLPEALQGQIDLFGVGIGRYRLMIIVICGLLTVALQLTLAKTRFGSRLRAAVDDPR 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       FA      G  GA  A          F     I  + +V +GG 
Sbjct: 177 VASGLGINVPQVFALTFAFGCGLAGFGGALSAEILGL--DPHFPLKFMIYFLIVVTVGGS 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S++    A+ +L                               ++   + ++++ R + 
Sbjct: 235 SSITGPFLASLLLGIGDVAGKYYLPKLGP--------------FMIYTIMIVILIWRPNG 280

Query: 339 LLRL 342
           L   
Sbjct: 281 LFGR 284


>gi|171186248|ref|YP_001795167.1| inner-membrane translocator [Thermoproteus neutrophilus V24Sta]
 gi|170935460|gb|ACB40721.1| inner-membrane translocator [Thermoproteus neutrophilus V24Sta]
          Length = 369

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 61/369 (16%), Positives = 113/369 (30%), Gaps = 48/369 (13%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  L V    +  + L       YI    + + I+ + A  +++  G  G+ +   V+  
Sbjct: 6   LVGLYVYGLSVAAVALSGLDVVSYILGTIVDVAIFAIIALSINLEAGVGGIPNFGKVLTV 65

Query: 75  AIGAYSYVILGSRYGLSIW-------------------------------LLIPVSAMIS 103
             GA+    + SR  +SI+                               L +  S    
Sbjct: 66  TAGAFIVGGVVSRLAMSIYGVSGDFVYDNPTIVSNLAKAMDPQGALLLLALSLLFSLAAG 125

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
            A G+ M LP+++ R DYLAI  L   ++   +   ++P   G  G+ +   L       
Sbjct: 126 AAIGVAMSLPAVRLREDYLAITLLAFGDVLFYVGRYYEPFVGGTFGVSIPPILEK----- 180

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                            +    +   +      ++  L  +    A R  R++ +     
Sbjct: 181 --------VFGGGFSRYLGAAVLAGAVALAVYLVLDRLVNSPYGRALRVHREDPELVEVF 232

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK-FSENIIVISIVILGGMTSLS 282
                  +L A AV  A    AGA +A     +    F   +       I+ILGGM +  
Sbjct: 233 GRRATALRLWAMAVGGAVSATAGALYALYAGAVHASSFTRITFTFYPWLIMILGGMGNNL 292

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +     I + +      ++ Y +                L       +I  +   L+  
Sbjct: 293 GVVNGVFIFVTLR---RLIDMYKYELSSILGFDPVWLAYMLFGALALAIIAAKPEGLIPE 349

Query: 343 RTPSNFLER 351
                   R
Sbjct: 350 EQTPLAKRR 358


>gi|51891940|ref|YP_074631.1| branched-chain amino acid ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
 gi|51855629|dbj|BAD39787.1| branched-chain amino acid ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
          Length = 289

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 84/304 (27%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I S      +Y + A GL ++  +  +++         G +    L    GL  W    +
Sbjct: 7   IISGLATGSLYALAALGLVLIFKTTDVVNFAQGEMAMFGTFIMFTLLKTAGLPYWGAFVL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   +   G ++   +L+       I+ LI +     I+        G            
Sbjct: 67  ALAFAFLMGAVIERVALRPLAQAPLISVLIATLGLMQIINGVAGWIWGYQARP------- 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 + +         ++  +     L     +     L  + T +  A R + +N+ 
Sbjct: 120 ----FPTAVSGSPIRLGDLVITLPDLVNLAVSLVVMTGFFLLFKFTKLGIAMRAVAENRV 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +           + +       AG   A   +            I   +  +LGG 
Sbjct: 176 AARLMGIPTDRILSLTWGLGGVLAATAGILIAPVTNL--DINMMADMQIKAFTAAVLGGF 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TSL         L  +  L                       T      + LV+++R   
Sbjct: 234 TSLPGAVVGGLTLGVLENLVGQF--------------VPQLKTPFAFGLIVLVLMLRPSG 279

Query: 339 LLRL 342
           L+  
Sbjct: 280 LMGT 283


>gi|332285891|ref|YP_004417802.1| ABC transporter permease protein [Pusillimonas sp. T7-7]
 gi|330429844|gb|AEC21178.1| ABC transporter permease protein [Pusillimonas sp. T7-7]
          Length = 300

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 100/301 (33%), Gaps = 26/301 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   +  + A GL+++ G LG+++      Y +GAY   +   R   S +L + ++ + 
Sbjct: 24  LIVGALLFLVAAGLTLIFGVLGVINFAHGSLYMLGAYM-GLTAYRVFDSYFLAVIMAGLG 82

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                ++     ++   +   +  L++   F  IL     +  G     +     F    
Sbjct: 83  VAIFSVLFERLFMRRVYNADVLMQLLVCYAFILILDDVVKLVWGAEFQSMGMPETF---- 138

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                +         I  +F   ++     ++  +   L+ T      R    N     +
Sbjct: 139 -----QLPPLFIGGGIVPVFYLVLMGVAALIAVVLWYVLKHTRTGKVVRAAAHNPTMTSA 193

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L           FA      GMAGA  A  R         FS  I    + ++GGM S+S
Sbjct: 194 LGLNTQLIYAGVFACGGLLAGMAGALAAPVRSM--SPGMGFSILIESFIVTVIGGMGSVS 251

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  ++  V                     F      LM +A+ L++++R   L+  
Sbjct: 252 GALVGALVIGMVRSFGS--------------IGFPDFVEGLMFVAMVLILVLRPGGLMGR 297

Query: 343 R 343
           +
Sbjct: 298 K 298


>gi|254473701|ref|ZP_05087096.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudovibrio sp. JE062]
 gi|211957087|gb|EEA92292.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudovibrio sp. JE062]
          Length = 342

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 43/330 (13%), Positives = 97/330 (29%), Gaps = 16/330 (4%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
             L L+ V+  + L      +       +     ++  + A GL+++ G + +++     
Sbjct: 23  APLFLVPVLMLIGLLAIGSGSTWLTLTAAGLAMGMMIFIMASGLTVIFGLMDVINFGHGA 82

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI-MSE 131
             ++GA++   +       I        + +    +   +      G       +  +  
Sbjct: 83  FISLGAFAGFTILGLLAGWIESPSIALNLGAVLLAVAFAMLVTGLAGYGFERLIVKPVYG 142

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                ++           +             R       F       E +    +    
Sbjct: 143 QHLKQILVTMGGLVVTQQLIYVIWGPDEIVLARPTAFQGSFVVLGAAIEKYRVLAIAIGL 202

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L  ++ L L RT I    R    N +   +L   I    L+ F V  A  G+ G  +  
Sbjct: 203 ALFVAMRLVLSRTRIGLLVRAGVQNGEMVEALGYPIQKLFLAVFMVGCALAGLGGVMWGM 262

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            ++ I+  M      I V  +VI+GG+ S+        ++  +      +          
Sbjct: 263 YQETITAHM-GAEVMISVFIVVIIGGLGSIEGCFIGAMLVGLLTNYTGFL---------- 311

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                        ++ +  V++ R   L  
Sbjct: 312 ----IPKLALVSTILLMGAVLMWRPQGLYP 337


>gi|167622520|ref|YP_001672814.1| ribose ABC transporter permease [Shewanella halifaxensis HAW-EB4]
 gi|167352542|gb|ABZ75155.1| Monosaccharide-transporting ATPase [Shewanella halifaxensis
           HAW-EB4]
          Length = 324

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 91/312 (29%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +       ++ L      +     ++  Q  I  + A G++IV+ + G + L+     A
Sbjct: 25  LIALFSLIFVVSLLSPNFLTVDNFLNILRQTSINGIIAVGMTIVILTAG-IDLSVGSVLA 83

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +                 ++    A+I+GA    +    +        IATL+   + + 
Sbjct: 84  LSGAIVA--TLIGMDVPVMIALPVALIAGAALGAISGIIVAKGKVQAFIATLVTMTLLRG 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + +        G                      F      Y + +   +  M  +  
Sbjct: 142 VTMVYTDGRPVPTGFSETA---------------DSFTWLGTGYVLGIPVPVWLMAIVFT 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L  T        +  N+ A       +   K++A+A+  +   +AG    A    
Sbjct: 187 GAWYLLNHTRFGRYIYAVGGNESAARLSGIAVDKVKIAAYAICGSMAALAGIIVTARLSS 246

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 247 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIVGTLIGALIIGFLNNALNLLDVSSYYQMI 306

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 307 AKASVILLAVLI 318


>gi|86749203|ref|YP_485699.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86572231|gb|ABD06788.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 289

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 90/303 (29%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I S      +Y + A G  I       ++     A  +GA      G RYG  + L I  
Sbjct: 6   IISGIGLGSMYGLIALGFHITYVVSNTVNFAQGSAMMLGAVLGYTFGVRYGWPMPLAIVA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +    G+++    ++      + A L+ +     +L      T G            
Sbjct: 66  ALGVCALFGLVVERILVRPFVVRGSNAWLMATVAAGIVLDNAVMFTFG-----------K 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S                    + L     +A + L LR T    A   +  N  
Sbjct: 115 EPRGFPSDWASQPIRLFGAGVYPLQLVIPLVGIGAAAVMHLLLRHTRRGKALLAVVQNPD 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +      +F VS+A  G+AG   A      S         I   ++ ILGGM
Sbjct: 175 AARLMGINVHRTIAISFMVSTALAGLAGLLIAPLFSVSSE--MGTLFGIKAFAVAILGGM 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S   +  A      +  L                   ++    ++   + L + +R + 
Sbjct: 233 GSAWGVVIAGLAYGLIEALVTSFLG-------------SVYTQIVVFSVVILALALRPNG 279

Query: 339 LLR 341
           L  
Sbjct: 280 LFG 282


>gi|119716071|ref|YP_923036.1| inner-membrane translocator [Nocardioides sp. JS614]
 gi|119536732|gb|ABL81349.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Nocardioides sp. JS614]
          Length = 290

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 92/305 (30%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G S+V G+LGL++         G++    + + + + I L   V
Sbjct: 7   VINGLTIGSVYALVAIGFSVVYGALGLVNFAHGDILMAGSFVAFGVHTSFDVPIVLACLV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                     I+   +++       +  ++ +     ++     +  G            
Sbjct: 67  GIGAGILLAGIVEEVAVRPVLKAHLLIPMMTTLGMGLVIRNVVELKWGS----------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S           +         L+           +LR T    A R +  +  
Sbjct: 116 GTLPFPSFAGSGFIEIGGLQIARAAVVTLVVAVVTLVGFAAFLRYTRPGFAIRVVAQDMT 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +     + + V  A   + G  +A + + +   M  F   +   +  I+GG+
Sbjct: 176 AARLMGVGVNRTIFAVYGVGGALGVIGGLLYANTLEVVYLGM-GFPILLKGFAAAIVGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L  +                    S       +    L +++L+R   
Sbjct: 235 GNLQGALIGGLVLGILEATV--------------GPSAGSYRDAIAFFLLIVILLVRPAG 280

Query: 339 LLRLR 343
           LL  R
Sbjct: 281 LLGAR 285


>gi|312114589|ref|YP_004012185.1| inner-membrane translocator [Rhodomicrobium vannielii ATCC 17100]
 gi|311219718|gb|ADP71086.1| inner-membrane translocator [Rhodomicrobium vannielii ATCC 17100]
          Length = 286

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 99/304 (32%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     L+  + A GL++V G LG+++L     Y +GAY  V L +++G     L   
Sbjct: 8   ILNGLQYGLLLFLAASGLTLVFGILGVINLAHGSFYMLGAYLAVTLTAQFGDIFVALAVG 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +       I  L              L   +  Q +L+ +  I   K         + 
Sbjct: 68  IPLAFVFGAAIEWLFIR----------HLYKRDHLQQVLLTFALILVFKEVQQTLWGNHP 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L     S +      +  + Y ++ + ++     L+ +++  ++RT +    R    N +
Sbjct: 118 LSIPTPSYLSSSISLTPDLGYPVYRFALMGICVALALAMMFVIQRTRVGRLIRAAESNPE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L           FA   A    AG   A                II   IV++GG+
Sbjct: 178 MVEALGYDSRILYRMVFAAGVALAAAAGILAAPVESA--YPGIGDRVLIISFVIVVIGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++                             + L+   + L++++R   
Sbjct: 236 GSIRGAFLGALLIGLADAFGKVF--------------VPEFSSVLIYAVMALILVVRPSG 281

Query: 339 LLRL 342
           L   
Sbjct: 282 LFGR 285


>gi|291526905|emb|CBK92491.1| monosaccharide ABC transporter membrane protein, CUT2 family (TC
           3.A.1.2.-) [Eubacterium rectale M104/1]
          Length = 337

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 96/313 (30%), Gaps = 25/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++  +++ +      +   I S+  QI I    A G+++V+  LG + L+     
Sbjct: 27  IIAVLIIMCVIVSIATDKFLTTNNIISVLRQISINTYIALGMTLVI-ILGHIDLSVGSIV 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+     V L    G+ + + I +   +    G I G     F+     I          
Sbjct: 86  AMSGTLTVGLTVNQGMPLIVAIIIGLAVGTLAGFISGFIVSHFKVPAFIITM-------- 137

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                   + N  +GI               +         F +  + + Y+++ +   S
Sbjct: 138 -------AMMNIASGIAYVYTGGQSTRITDKMFIAIGTGYLFNVIPLPVVYMVILIAIFS 190

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +     +T        I  N++A       I   ++  F +S A    AG    +   
Sbjct: 191 FLL----SKTKFGTYVYAIGGNREAARLSGVPIKKIEIIVFTLSGALAAFAGLVLCSRMY 246

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P +    E   + + V     + GG   +S       ++  +      +    +  L
Sbjct: 247 SGQPSVGSGYELDAIAACVLGGTSMTGGKGRISGTVFGAMVIGIISNGLNLIGVSSYWQL 306

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 307 IIKGLIIACAVLL 319


>gi|256111133|ref|ZP_05452169.1| hypothetical protein Bmelb3E_00836 [Brucella melitensis bv. 3 str.
           Ether]
 gi|265992644|ref|ZP_06105201.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether]
 gi|262763514|gb|EEZ09546.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether]
          Length = 295

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 53/318 (16%), Positives = 113/318 (35%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           +++   +        +    I    Y M + GL+I+ G L +++      Y +GA+   +
Sbjct: 1   MVMIFGIPLQALLGQLLVGLINGSFYAMLSLGLAIIFGLLRIINFAHGAQYMLGAFVGYL 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L S  G+S W  + ++ +I    G I+   +L    +   +  L+ +     ++      
Sbjct: 61  LLSWLGISYWPALVLAPLIVELGGAIIERVALSRLYNLDPLYGLLFTFGLALVIEGTFRY 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G AG   A      G               F+    +  +V++   F+     L + +
Sbjct: 121 YYGAAGQPYAVPPSLAG----------GRNLGFMFLPNYRAWVVVASLFVCLGTWLLIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N     +    +       +A+ SA  G+AG   A         +   
Sbjct: 171 TKLGAYLRAATENPTLVKAFGINVPLLLTFTYALGSALAGLAGIMAAPIYQV--SPLMGS 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  I+V ++V++GGM S+        +L     L                  +    + +
Sbjct: 229 NIIIVVFAVVVVGGMGSILGAIITGYVLGIAEGLTKVF--------------YPEASSIV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           + + + +V+L+R   L  
Sbjct: 275 VFVIMAIVLLVRPAGLFG 292


>gi|291296886|ref|YP_003508284.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
 gi|290471845|gb|ADD29264.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
          Length = 328

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 46/321 (14%), Positives = 99/321 (30%), Gaps = 27/321 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGA----TKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           L++   +  +  +V  LL  +F         + +    +  QI +  + A G ++++ + 
Sbjct: 15  LDRLPSLTIMGPLVALLLAVVFFSFQSERFLTGQNFSLILQQISVVAVLAIGQTLIILTA 74

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+     A+G           G+   L I     ++ A G + G    +F+     
Sbjct: 75  G-IDLSVGFVMALGTMVMAKFAVELGMPPLLAILCGMAVTTAFGFLNGFLITRFKLPPFI 133

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           +    M+  F    I                      T          + ++F I E   
Sbjct: 134 VTLGTMNIAFALTQIY-----------------SRAQTVSGLPEAHLFWGNTFKIGETVF 176

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
            Y ++ M  L   +  +L  TA       + +N +A   +        L  + ++  F G
Sbjct: 177 TYGVVLMIVLYLLVWFFLSETAPGRHLYAVGNNPEAARLMGIPTQRVLLLTYTIAGFFYG 236

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +AG    +      P+  +      + ++V+      GG   +        I+       
Sbjct: 237 IAGWLLISRTSVADPNAGQTENLETITAVVLGGTSLFGGRGMILGTLLGAIIVGVFRNGL 296

Query: 299 CGMNFYYFNSLLKFDCSFNMR 319
                     +L       + 
Sbjct: 297 TLTGVSSVYQVLITGILVILA 317


>gi|157960345|ref|YP_001500379.1| ribose ABC transporter permease [Shewanella pealeana ATCC 700345]
 gi|157845345|gb|ABV85844.1| Monosaccharide-transporting ATPase [Shewanella pealeana ATCC
           700345]
          Length = 324

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 92/312 (29%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +       ++ L      +   + ++  Q  I  + A G++IV+ + G + L+     A
Sbjct: 25  LIALFSLIFVVSLLSPNFLTVDNLLNILRQTSINAIIAVGMTIVILTAG-IDLSVGSVLA 83

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +                 ++    A+I+GA    +    +        IATL+   + + 
Sbjct: 84  LSGAIVA--TLIGMDVPVVVALPVALIAGAALGAISGIIVAKGKVQAFIATLVTMTLLRG 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + +        G                      F      Y + +   +  M  +  
Sbjct: 142 VTMVYTNGRPVPTGFSDTA---------------DSFTWLGTGYVLGIPVPVWLMAMVFT 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L  T        +  N+ A       +   K++A+A+  +   +AG    A    
Sbjct: 187 GAWYLLNHTRFGRYIYAVGGNESAARLSGIAVDKVKIAAYAICGSMAALAGIIVTARLSS 246

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 247 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 306

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 307 AKASVILLAVLI 318


>gi|269928795|ref|YP_003321116.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
 gi|269788152|gb|ACZ40294.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
          Length = 294

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 93/304 (30%), Gaps = 20/304 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +  ++Y + + GL+++ G + +++        +  Y+         L   + +P+
Sbjct: 10  LTNGLLIGMVYALISVGLTLIFGLMEIVNFAHGEFLMLAMYAAFWASVLLSLDPMVSLPL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +    G  G+      +        +A +  +      L        G A          
Sbjct: 70  TVGGLGLLGLATYRGIIAHILHAPMLAQIFATFGLGLFL-------RGLAQYLWTPNFRT 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +       I         V   +      +       ++ L++ RT +  A + + +++ 
Sbjct: 123 IERPWLGQISGGTVNIGGVFLGVPQIAAAILAGVAFVALYLFITRTRVGLALQAVAEDKS 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           + +  A +G+AGA  A+               ++   +V LGG 
Sbjct: 183 TAGLMGIDSNRMFALGWVLGGACVGVAGAVLASFYPI--TPTVGILFALMAYIVVALGGF 240

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++  V E    +                     ++     +V+L+R   
Sbjct: 241 GSVPGALVAGLLVGLVQEASPILFG-----------VPTTYKYAVVFALYLVVVLIRPQG 289

Query: 339 LLRL 342
           L   
Sbjct: 290 LFGR 293


>gi|182434977|ref|YP_001822696.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|178463493|dbj|BAG18013.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 296

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 76/307 (24%), Gaps = 21/307 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G  ++  +  +++         G Y   +      +  W  + V
Sbjct: 8   LLGGLSIGSVYALIALGFVVIFKATEVVNFAHASLLLAGGYVTAV--LHDDIGFWPALLV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +   G  +    ++           I++     +LI       G            
Sbjct: 66  GIAGAATVGAGIEFFVMRRYRGSDHSVLAIVTIGVDILLITELTRRMGTD---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +             V          L    L    +L  R T+   + R   +N +
Sbjct: 116 -VLALGDPWGNEVVSVGGVTLAQTRIAAFLAAGLLITVFLLAFRYTSWGVSMRAAAENPQ 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L+A    +  +    A F         +       +      ILGG+
Sbjct: 175 TAALMGIKLGRVSLAA-WAVAGALAAVAALFLTVFPTPGLERATSLAALKAFPAAILGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +       I+        G                         + +  V+L+R   
Sbjct: 234 DSTTGALAGGLIVGVTESFATGYQSDLAFLGRGIGDLAP-------YLVMVAVLLIRPAG 286

Query: 339 LLRLRTP 345
           L   + P
Sbjct: 287 LFGTKEP 293


>gi|138895466|ref|YP_001125919.1| ribose ABC transporter permease [Geobacillus thermodenitrificans
           NG80-2]
 gi|196249076|ref|ZP_03147775.1| Monosaccharide-transporting ATPase [Geobacillus sp. G11MC16]
 gi|134266979|gb|ABO67174.1| Ribose ABC transporter (permease) [Geobacillus thermodenitrificans
           NG80-2]
 gi|196211305|gb|EDY06065.1| Monosaccharide-transporting ATPase [Geobacillus sp. G11MC16]
          Length = 329

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 95/313 (30%), Gaps = 27/313 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++  ++L +      +   + ++  Q  I  + A G+ + + + G + L+     A
Sbjct: 27  LIGLILLIMVLTVLSPKFLTVNNVMNIARQSSINALLAIGMLLPILTAG-IDLSVGSLLA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +      I+    G+S +L I V   +    G + G+   K R  +  I+TL    I + 
Sbjct: 86  LSIMMMGIVTVNMGMSPFLGILVCLAVGAGFGWLNGILLTKLRLPHPFISTLGTMNIARG 145

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I +                               +        +   +    L +  +  
Sbjct: 146 IALIVTG-------------------AAPIAGFPYAIQFLGREFVGPIPVSFLLVIVVYV 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              ++L RT        I  N +A       +    +  + +S    G+AG       + 
Sbjct: 187 IFHIFLTRTQTGRYIYAIGGNPEAARLSGINVDRVLIIVYTISGLMAGLAGLVMVGRVNS 246

Query: 256 ISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
               +   S  +  I+ VI+      GG+ ++        I+  +      +N      +
Sbjct: 247 A-FPLAGLSYELDAIAAVIIGGASFMGGVGTVWGTLIGALIIAVLRNGLNLLNVPADFQM 305

Query: 310 LKFDCSFNMRHTT 322
                        
Sbjct: 306 TVIGTVIIAAVFV 318


>gi|92112495|ref|YP_572423.1| inner-membrane translocator [Chromohalobacter salexigens DSM 3043]
 gi|91795585|gb|ABE57724.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Chromohalobacter salexigens DSM 3043]
          Length = 383

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/326 (9%), Positives = 88/326 (26%), Gaps = 10/326 (3%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
             F +     +       +   ++  L      S     +M   + I+ + + G+ ++V 
Sbjct: 18  RRFDVARMLLEGRAFFALIAIIVIFSLLSPVYFSTSNFLTMSSHVAIFGLLSLGM-LLVI 76

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G + L+      +       L        + ++    +                    
Sbjct: 77  LTGGIDLSVGSTLGLAGVFAGFLMQGVSFEAFGVVVYPPVWVVVVLTCGLGAL----VGA 132

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           +    +   ++   +             + + D L +        +    F         
Sbjct: 133 INGVLIAYFKVPAFVATLGLLYVARGVALLMTDGLTYNNLGGSEALGNTGFDWLGFNRLF 192

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +   +L +  ++ + +L L RT       +   N +A       +   ++S + +S   
Sbjct: 193 GIPVGVLILAAVAIACLLLLSRTPFGRWVYSTGGNARAAELSGVPVKRVQVSVYVLSGIC 252

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
             +AG   ++      P      E   +  +VI      GG  ++        ++  + +
Sbjct: 253 AAIAGLVLSSQLTSAGPTAGTTYELTAIAGVVIGGAALTGGRGNVRGTLLGAFVIGFLSD 312

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               +    +   +       +    
Sbjct: 313 GLVIIGVSSYWQTVFTGAVIILAVLL 338


>gi|19552157|ref|NP_600159.1| ABC-type transporter, permease component [Corynebacterium
           glutamicum ATCC 13032]
 gi|62389821|ref|YP_225223.1| branched chain amino acid ABC transporter permease [Corynebacterium
           glutamicum ATCC 13032]
 gi|145295089|ref|YP_001137910.1| hypothetical protein cgR_1032 [Corynebacterium glutamicum R]
 gi|21323697|dbj|BAB98324.1| ABC-type transporter, permease components [Corynebacterium
           glutamicum ATCC 13032]
 gi|41325156|emb|CAF19637.1| Branched-chain amino acid ABC-type transport system, permease
           component [Corynebacterium glutamicum ATCC 13032]
 gi|140845009|dbj|BAF54008.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 294

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 102/312 (32%), Gaps = 29/312 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---ILGSRYGLSIWLL 95
           + +      + ++ A GLS+  G +G++++       +GAY+     ++    GLS+ + 
Sbjct: 8   LVAGLSVGSVLLLVAVGLSLTFGQMGVINMAHGEFIMVGAYTAYVVQLVVGSAGLSLLIS 67

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           IP++ +I G  G+++    LK+         L    +   +    + I    A    A  
Sbjct: 68  IPLAFIIGGLFGVLLEQFLLKYLYHRPLDTLLATFGVGLILQQLARNIFGAPAVDVRAPE 127

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                  V             V+      ++L        ++ ++L RTA     R +  
Sbjct: 128 FLRGNVEVLG-----------VLVPTARLFILALAIASVTALAVFLNRTAWGRRIRAVVL 176

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N+    +            F V S   G+AG   A +    +      +  +    +V  
Sbjct: 177 NRDLAETAGIDTRATDRMTFFVGSGLAGIAGV--AITLIGATGPTIGQNYIVDAFLVVAA 234

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+  +        +L                               +++IA+   +  R
Sbjct: 235 GGIGRVKGAVIMAFVLGITQAFVEYTTGASIAK-------------FIVLIAVVAFLQFR 281

Query: 336 SHSLLRLRTPSN 347
              L + +T S 
Sbjct: 282 PQGLFQTQTRSL 293


>gi|312881003|ref|ZP_07740803.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Aminomonas paucivorans DSM 12260]
 gi|310784294|gb|EFQ24692.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Aminomonas paucivorans DSM 12260]
          Length = 294

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 83/303 (27%), Gaps = 24/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G S+V   L   +        IG Y    +    G +IW+   V
Sbjct: 9   VINGLSLGSVYALIAVGYSLVYSILLFSNFAHGGFLVIGGYLCYGILRLQGGNIWVAAGV 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +G   ++      K   +   +   +M       ++          G + A     
Sbjct: 69  ALIGAGIAAVLTERLGYKPIRERTPLTLYMMIASMGISIVIENLFVVTVGGRFRALPPVI 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V                  F    L+        + L+L +T    A R    N +
Sbjct: 129 PTNPVN--------LFGLATTSAFDLLSLVTSVVCLVGLQLFLVKTKWGLAIRAASYNLR 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F V+     + G F +             +         ++GG+
Sbjct: 181 TAGLMGVNVNLLISIVFFVAGLLAAVGGIFLSVRYTLFPQLG---AITTKAFVAAVIGGL 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL      + IL     L  G     F                ++   L + +L+R   
Sbjct: 238 GSLPGAVLGSLILGLAEMLTAGFISSQF-------------RDLVVFAMLIITLLVRPTG 284

Query: 339 LLR 341
              
Sbjct: 285 FFG 287


>gi|311104710|ref|YP_003977563.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310759399|gb|ADP14848.1| inner-membrane translocator 23 [Achromobacter xylosoxidans A8]
          Length = 295

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 110/303 (36%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +    Y M + GL+++ G L +++      Y +GA+   +  S  GL+ W+++ +
Sbjct: 16  LLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMLGAFVAWMGLSYLGLNYWVMLIL 75

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I G  G+I+    L+       +  L+++     ++        G +G         
Sbjct: 76  APLIVGLFGIIIEKLLLRHLYKLDHLYGLLLTFGLTLLIEGLFRSFYGVSGQPYPTPDAL 135

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G T             F++   +  +V++    +  +    + RT +    R   +N +
Sbjct: 136 RGAT----------NLGFMVLPNYRGWVVVASLVVCLATWFVIERTRLGALLRAGTENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +    A  G AG   A         +   +  I+V ++V++GGM
Sbjct: 186 LVEAFGVNVPRMITLTYGFGVALAGFAGVLAAPVLQI--SPLMGSNLIIVVFAVVVIGGM 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L  +  L                  +    +T++ I + +V+L+R   
Sbjct: 244 GSIMGAIVTGLGLGVIEGLTKVF--------------WPEASSTVVFIIMAIVLLIRPAG 289

Query: 339 LLR 341
           L  
Sbjct: 290 LFG 292


>gi|307150569|ref|YP_003885953.1| inner-membrane translocator [Cyanothece sp. PCC 7822]
 gi|306980797|gb|ADN12678.1| inner-membrane translocator [Cyanothece sp. PCC 7822]
          Length = 309

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 97/299 (32%), Gaps = 14/299 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           + + +++  +    + + +   G LSL     YA+G Y   IL ++              
Sbjct: 11  LIVSMILGAILGLSVYLPL-MSGQLSLASPGFYALGGYIAAILSTQVFKY---------- 59

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
                   +    L+     +  A L +      + ++   +           R+  L  
Sbjct: 60  --TGDLFPLPFLGLELLLTTVISAVLAILLGIPVLRLRGIYLAIATIAFVEILRILALNL 117

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            +                +I   ++ + +  LS   +  L +  +  A R IR+++ A  
Sbjct: 118 DITGAAVGIFAIPQPFHSQIEYLWLAIPLLILSMIFLYRLEQIRVGRALRAIREDELASG 177

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           ++     + K+ +F + +   G+ G   A   +  +     F  +II ++ V++GG  + 
Sbjct: 178 AMGIDQTYYKVLSFTLGAILAGLVGVISAHFLNTWNARQGTFDASIIFLAFVLIGGSKTF 237

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                   IL  + E+   M        L            +    + +  +     ++
Sbjct: 238 VGPVIGGMILTALPEVLRAMAG-TSGLPLPLANFLRDGRLIIFGFLIVIGSIFYPQGII 295


>gi|170759527|ref|YP_001786657.1| ribose transport system permease protein RbsC [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169406516|gb|ACA54927.1| ribose transport system permease protein RbsC [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 331

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/314 (12%), Positives = 89/314 (28%), Gaps = 16/314 (5%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++ L   +   ++        +     ++ +Q  I  + A G++ V+   G + L+    
Sbjct: 22  MILLGFAILCAVIGSLSSNFFTVTNWLNILVQCSIVGIIAVGMTFVI-ITGGIDLSVGSM 80

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            A  A    ++         +++    + +          +         I TL    IF
Sbjct: 81  LAFSAIVSGMMLKNGASIPIVILVALIIGTAIGFANGFFITKF--NVPAFIVTLATMSIF 138

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           +   +      N    +  +                 +     +   I +    +G    
Sbjct: 139 RGSTLVVSDGKNQALSVSKSASPDLFSKLTAFSKIGDKLGPVPIPIIIMIIIFFIG---- 194

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
                  L+ T        I  N++A       I   +L A+ ++     ++G    A  
Sbjct: 195 ----YYVLQYTTFGRNLYAIGGNREATRFSGINIGKIELLAYTITGLLCALSGVVLNARL 250

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
               P+     E   + ++VI      GG  ++S       I+  +      MN   F  
Sbjct: 251 GAALPNAGVGYEMDAIGAVVIGGASLAGGEGTISGTILGVLIIGVLNNGLNLMNVNPFYQ 310

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 311 QVVKGAVILVAVLV 324


>gi|86136055|ref|ZP_01054634.1| Putative high-affinity branched-chain amino acid transporter
           membrane protein [Roseobacter sp. MED193]
 gi|85826929|gb|EAQ47125.1| Putative high-affinity branched-chain amino acid transporter
           membrane protein [Roseobacter sp. MED193]
          Length = 308

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 56/302 (18%), Positives = 115/302 (38%), Gaps = 23/302 (7%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
           S  Y  S+    ++Y+  +   ++  G   L++L+    + IG Y      S Y  S W 
Sbjct: 26  SDGYWLSIATTAMMYIALSTSWALFSGPTHLIALSTGAFFGIGGYLVGTGMSDYDQSFWT 85

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
           +  ++ +++ A  +++GL +L+  G Y  I TL ++E+ +N++   +    G  G+YV  
Sbjct: 86  MAQIAPVVATALALLVGLATLRLSGVYFVIFTLGLAEMVRNLVSWVQNNFLGSRGLYVLT 145

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                                       +Y++LL +  +      W+ ++ +  A R I 
Sbjct: 146 DFTEAH----------------------IYWMLLAVAAVVFLAGSWINQSRLGFALRIIG 183

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVISIV 273
           ++++    +     ++K+  F  +  F  + GA  A     I P++ F    + +V+ + 
Sbjct: 184 NDEEVARHVGINTAWSKVILFMTTGFFAALVGAIVAPRYSYIEPNVVFSPELSFMVVIMA 243

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+  L              E             L       +         LF  +L
Sbjct: 244 LLGGVHRLWGPLVGVIPFTLAWEAITVSFPNSTTLFLGLSFLLIVYLIPHGFTGLFETML 303

Query: 334 MR 335
            R
Sbjct: 304 GR 305


>gi|163856031|ref|YP_001630329.1| putative branched-chain amino acid transport permease [Bordetella
           petrii DSM 12804]
 gi|163259759|emb|CAP42060.1| putative branched-chain amino acid transport permease [Bordetella
           petrii]
          Length = 295

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 113/318 (35%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           ++    +        +    +    Y M + GL+++ G L +++      Y +GA+   +
Sbjct: 1   MIDLFGIPIQALLGQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGSLYMLGAFVAWM 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
             S  GL+ W+++ ++ ++ G  G+++    LK       +  L+++     ++      
Sbjct: 61  GLSYLGLNYWVMLILAPLVVGLFGIVIEKLLLKHLYKLDHLYGLLLTFGLTLLIEGLFRS 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G +G          G T             F+I   +  +V++    +  +    + R
Sbjct: 121 IYGVSGQPYPTPDLLRGAT----------NLGFMILPNYRGWVVVASITVCMATWFIIER 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N K   +    +       +    A  G AG   A         +   
Sbjct: 171 TRLGALLRAGTENPKLVEAFGVNVPRMVTLTYGFGVALAGFAGVLAAPVLQI--SPLMGS 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  I+V ++V++GGM S+         L  V  L                  +    +T+
Sbjct: 229 NLIIVVFAVVVIGGMGSILGAILTGLGLGVVEGLTKVF--------------WPEASSTV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           + I + +V+L+R   L  
Sbjct: 275 VFIIMAIVLLLRPAGLFG 292


>gi|300314070|ref|YP_003778162.1| branched-chain amino acid ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300076855|gb|ADJ66254.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 294

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 112/315 (35%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y M + GL+++ G L +++      Y +GA+   +  S
Sbjct: 3   LFGIPLQALLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGTLYMLGAFLAWMGLS 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL+ W+++ V+ ++ GA G+++    L++      +  L+++     ++        G
Sbjct: 63  YLGLNYWVMLIVAPILVGAFGIVIEKTMLRWLYKLDHLYGLLLTFGITLMIEGIFRSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G   +      G T             F++   +  +V++    +  +    + +T +
Sbjct: 123 VSGQPYSVPDLLQGAT----------NLGFMVLPNYRAWVVVASLIVCFATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +   +  
Sbjct: 173 GAYLRAGTENPKLVEAFGINVPLMVTLTYGFGVALAAFAGVLAAPVIQV--SPLMGSNLI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +  L                  +     T++ I
Sbjct: 231 ITVFAVVVIGGMGSILGSIITGLVLGLIEGLTRVF--------------YPELSATVVFI 276

Query: 327 ALFLVILMRSHSLLR 341
            + +V+++R   L  
Sbjct: 277 IMAIVLMVRPAGLFG 291


>gi|226305182|ref|YP_002765140.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226184297|dbj|BAH32401.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 752

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 84/292 (28%), Gaps = 8/292 (2%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +     +   +Y + A GL +   + G+ +        +GA+ Y  L   + L   + +
Sbjct: 6   TFTILGLVLGSVYAIAASGLVLTYNTSGIFNFAHGAQAMLGAFIYWQLRYGWELPTVVAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +S ++ G        P +      L +  L  +     I++    +    +  +     
Sbjct: 66  LISLVLVG--------PLMGLGLYVLIMKGLRDTAEVTKIVVTVSILLGMLSISHWFWHP 117

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
               T         +               +L    ++  + +   RT    A R + D+
Sbjct: 118 ETARTMQMFFGDQSKITVFGASIRYHELICILVAIAIAVGLRILFTRTRAGVAMRGVVDD 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +               ++A+ S    +AG                    I   +  + G
Sbjct: 178 PELLRLNGHNPERLAALSWAMGSTLAVLAGILITPISGGTLEANMLTLLVIDAFAAAMFG 237

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
            + S+ +      +L              ++    F  S  M    +++I L
Sbjct: 238 RLRSIPRTFVGAVVLGLAGTYVLAYFPTSWSWTSNFRVSLPMIALFVVLIVL 289



 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 105/286 (36%), Gaps = 10/286 (3%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            +     L++ ++L          +     + + + A  L+++ G  G L+L  V   AI
Sbjct: 313 AVVWGVALIVIVYLIRLLMVTSAVTTLTIGMTFAIIALSLTLLTGYAGELNLAPVSFGAI 372

Query: 77  GAYSYVILGSRYG----LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
                   G              I V  +++   G ++ LP+L+ RG YLA+AT+     
Sbjct: 373 ATIVAFHFGISGSGLAAHLNLWGIVVGVLVTAVIGGLVALPALRLRGLYLALATMAFGVF 432

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             N++++            +    Y L       +   +     +  E      +  +  
Sbjct: 433 LSNMVLR------DTTEHEMFGMKYSLFKDGNIALPPLKIGPLDLSNETVFLMTVTALFS 486

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +    ++ LR +        ++D+      L  +++  KLS F +SS   G+ G   +++
Sbjct: 487 VLGVGVIALRNSGYGRRLAAMKDSPAGSAMLGQSLVRLKLSVFMISSGIAGLGGILMSSA 546

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
              +S + F    ++ ++ + ++ G+  ++       +      + 
Sbjct: 547 MGSVSGESFAIMVSLSLLMLTVVAGIGYVTGALFGGLMAGIGFAVI 592


>gi|218438101|ref|YP_002376430.1| inner-membrane translocator [Cyanothece sp. PCC 7424]
 gi|218170829|gb|ACK69562.1| inner-membrane translocator [Cyanothece sp. PCC 7424]
          Length = 290

 Score = 66.4 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 79/291 (27%), Gaps = 12/291 (4%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            + + +      +  + A GL++  G L L +        +GAY   ++          +
Sbjct: 7   PQLLFNGLAVGSVIALAAVGLTLTYGILRLSNFAHGDFMTLGAYITWLVNISGLNLWVSI 66

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  +     A      L     R       TLI+  I   + I+              D 
Sbjct: 67  VLGAGGTVLAMIASEYLLWKPMRDRRATTTTLIIISIGLALFIRNGIFMIWGGSNQRYDL 126

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                +         +        ++   L+ T I  A R + D
Sbjct: 127 PVMAAVDFLG-----------IKVAFDRILAIALAVLAILALHFLLQNTKIGKAMRAVAD 175

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N          + +  L  + ++     + GA F      I      +   + + + VIL
Sbjct: 176 NPDLARVSGINVEWVVLWTWIITGVLTALGGAMFGLIVGGI-RPNMGWFLILPMFASVIL 234

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           GG+ +         ++    EL   M    +   +       +       I
Sbjct: 235 GGIGNPYGAIAGALVIGVAQELSVPMLGSDYKLGVALLIMIIILLVRPQGI 285


>gi|149926556|ref|ZP_01914817.1| ABC-type transporter, permease component [Limnobacter sp. MED105]
 gi|149824919|gb|EDM84133.1| ABC-type transporter, permease component [Limnobacter sp. MED105]
          Length = 294

 Score = 66.0 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 46/316 (14%), Positives = 112/316 (35%), Gaps = 26/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y M + GL+++ G L +++      Y +GA+   +  +
Sbjct: 3   IFGIPLQAFLGQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMMGAFFAWMGMA 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            + L+ W+++ ++ ++ GA G+++    L++      +  L+++     +L        G
Sbjct: 63  YFNLNYWVMLLLAPLLVGAFGILIEKTMLRWLYKLDHLYGLLLTFGITLMLEGIFRSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G   +      G T             F+I   +  +V++    +  +  + + +T +
Sbjct: 123 VSGQPYSVPEALQGAT----------NLGFMILPNYRAWVVVASLVVCFATWIMIEKTKL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N +   +    +       +    A    AG   A         +   +  
Sbjct: 173 GALLRAGTENPRLVEAFGINVPLMVTLTYGFGVALAAFAGVLAAPVIQI--SPLMGSNLI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+         L  V  L                  +     T++ I
Sbjct: 231 ITVFAVVVIGGMGSILGSIITGLTLGIVEGLTRVF--------------YPELSATVVFI 276

Query: 327 ALFLVILMRSHSLLRL 342
            + +V+++R   L   
Sbjct: 277 IMAIVLMIRPAGLFGR 292


>gi|192359228|ref|YP_001981453.1| amino acid/sugar ABC transporter permease [Cellvibrio japonicus
           Ueda107]
 gi|190685393|gb|ACE83071.1| amino acid/sugar ABC transporter, permease protein [Cellvibrio
           japonicus Ueda107]
          Length = 308

 Score = 66.0 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 97/301 (32%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   ++V+ A GL+I+ G +G++++       +GAY   +  + +      L  +  +I
Sbjct: 22  LILFSVFVLMALGLAIIFGQMGVINMAHGEFMILGAYVTYLTSNVFASYFADLFSIYFII 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     I              +   + +     +L  W      +           +G T
Sbjct: 82  AMILAFIAAALLGALVEWA--MIRHLYNRPLDTLLATWGLSLILQQLYRSVFGAREVGVT 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +      +  +   I   +V+     +S +I + + R+      R +  N+    +
Sbjct: 140 LPDWLMGSYQLTDSIELPINGLFVMCLALGISLTIAVLMYRSRWGTQVRAVVQNRAMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           FA+     G+AG+ F       +         +    +V+ GG +SL 
Sbjct: 200 VGINTARVDRMTFALGCGIAGVAGSAFTMIGS--TGPTSGQLYIVDTFLVVVFGGASSLL 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +               +               L ++ +  ++++R   L  L
Sbjct: 258 GTIASAFSISQAQSAMEFFLSGSMSK-------------VLTLLFVVFILMLRPQGLFTL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|138895171|ref|YP_001125624.1| branched chain amino acid ABC transporter permease [Geobacillus
           thermodenitrificans NG80-2]
 gi|196248247|ref|ZP_03146948.1| inner-membrane translocator [Geobacillus sp. G11MC16]
 gi|134266684|gb|ABO66879.1| Branched-chain amino acid ABC transporter (permease) [Geobacillus
           thermodenitrificans NG80-2]
 gi|196211972|gb|EDY06730.1| inner-membrane translocator [Geobacillus sp. G11MC16]
          Length = 287

 Score = 66.0 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 94/302 (31%), Gaps = 27/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GL++V G L + +      Y +G Y  +   S+ GL   L I V
Sbjct: 8   LINGLTVGSVYSLVALGLTLVYGILHIPNFAHGALYMMGGYVTLTAMSQAGLPYGLAIVV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++ G  G++M         D   +   I +      L  +     G     +      
Sbjct: 68  SMVVVGLLGVLMERLVFYPLRDAPPLHDKIAAIGILLFLEAFAQFVWGADYQTMPTP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +   +    ++     +   + L+L++T I  +   +  N++
Sbjct: 125 ---------YGNVVTVFGLTLTVQRILIIASTVVIMMLLYLFLKKTFIGASIIAMAQNRE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        +  F +S     +A +  +     +          +    I+ILGGM
Sbjct: 176 GANLVGINTNKVAMMTFLLSGGLAALAASLASP--INLVFPGMGHLVILKAFVIIILGGM 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL     L                   N     +    L +++ ++ + 
Sbjct: 234 GSIPGAIVGGYILGFSESLGATYVS-------------NDYKDIIAFAILVIILTVKPNG 280

Query: 339 LL 340
           L 
Sbjct: 281 LF 282


>gi|11498431|ref|NP_069659.1| branched-chain amino acid ABC transporter, permease protein
           (braD-2) [Archaeoglobus fulgidus DSM 4304]
 gi|2649776|gb|AAB90410.1| branched-chain amino acid ABC transporter, permease protein
           (braD-2) [Archaeoglobus fulgidus DSM 4304]
          Length = 297

 Score = 66.0 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 54/309 (17%), Positives = 103/309 (33%), Gaps = 23/309 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   IY + A G++I+ G L +   +    Y IGAY+  +  S  G  + +    
Sbjct: 12  LLGGLVVGFIYALTALGITIIYGILQIPDFSHGNRYMIGAYAGFLAASVAGSMLEISYVA 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + + A   ++ + S  F    L  A  I S I    L+                R++ 
Sbjct: 72  AILGAVAVSSVIAVLSYLFVYKRLLSAPHITSFIAAIGLLMLLEGFALAVFGPRYQRIHT 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +             +        VL       AS++ +LRRT    A   +  +  
Sbjct: 132 PFDYM--------VVIGALRINAQRLIVLFCSIAAIASLLYFLRRTVTGIALEAVAQSPI 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        L AFA++ A  G A A  A     +   +     N+    I ++GG+
Sbjct: 184 GAKLVGINTDKMTLIAFAIAGALAGFAAALIAP--ITLVYPIMGAELNLKAFVICVVGGL 241

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L  V  L  G     + +L+ F               L  +++++   
Sbjct: 242 GNIPGAIAGGLVLGIVESLYGGYFDIRWKNLVAFG-------------ILVAILILKPEG 288

Query: 339 LLRLRTPSN 347
           L   +    
Sbjct: 289 LFGKKERRA 297


>gi|110679855|ref|YP_682862.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
 gi|109455971|gb|ABG32176.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
          Length = 336

 Score = 66.0 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/284 (10%), Positives = 72/284 (25%), Gaps = 11/284 (3%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW---------LLIPVS 99
             + A G++++ G L   +       A GA   V+    +              L +P  
Sbjct: 25  LALGALGVTLIYGILRFSNFAHGDTMAFGAMVTVLFTWLFQNWGLSLGPLPTALLALPFG 84

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +      ++      +F  +  A   +++        I    +                
Sbjct: 85  ILACMGLLLLTDRMVYRFYREQKAKPVILVIVSLGVTFILNGIVRFIIGPDDQRFTDGER 144

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                   R        +  +      +L        +  +L RT    + R   DN+  
Sbjct: 145 FIISARTFREMTGLREGLAIKTTQGITVLVAVICVILLFWFLNRTRTGKSMRAYSDNEDL 204

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                       +  + + +    +AG  +   +         F   + + +  I+GG+ 
Sbjct: 205 ALLSGINPERVVMITWLIVAGLATIAGVLYGLDKSF--KPFTYFQLLLPIFASAIVGGLG 262

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +         ++                 L+  +   +     L
Sbjct: 263 NPLGAIAGGFVIAFSEVTVTYAWKKVLTYLMPENLEPSGLVQLL 306


>gi|23010482|ref|ZP_00051156.1| COG0559: Branched-chain amino acid ABC-type transport system,
           permease components [Magnetospirillum magnetotacticum
           MS-1]
          Length = 308

 Score = 66.0 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/276 (12%), Positives = 82/276 (29%), Gaps = 4/276 (1%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   +YV+ A GL+I+ G +G++++       +GAY   +  + +   +  L P    +
Sbjct: 22  LILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVTYLCSNLFQTYLPALFPAYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     +            L     +       +L  W      +           +G  
Sbjct: 82  AMVLAFLASGAMGMLVEWAL--IRHLYKRPLDTLLATWGLSLILQQAYRSIFGPREVGVE 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           + S +      +  +  +I   +V+     ++  + L + R+      R +   +    +
Sbjct: 140 LPSWMMGSINVTDSIEVQINGLFVIAVTTVITLGVALLIYRSRFGAQIRAVMSKRPMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +       +   F +     G+ G+ F       +   F     +  + I + GG  SL 
Sbjct: 200 VGIHTEKVERYTFGLGCGIGGIGGSGFTMIGS--NGPTFGQLYIVDYLLIRVFGGAESLI 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                   +                S        + 
Sbjct: 258 GTIGFALSISENPSNLEFFPPARLASAHPVAGVASD 293


>gi|260460150|ref|ZP_05808402.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
 gi|259033795|gb|EEW35054.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
          Length = 358

 Score = 66.0 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 87/313 (27%), Gaps = 17/313 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +L V   +      G   +   +  +  Q+ I        ++V+ + G + L+     
Sbjct: 49  FIVLVVGVLIFSVAAGGRFFAPFNLSLVLQQVTIIAFLGIAQTLVILTAG-IDLSVGAMM 107

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +     L   +G+ + +   +  +    CG+I G+     +     +          
Sbjct: 108 VLSSIVMGRLTVTFGVPVEIAFVLGMLTGLLCGLINGVLVAIIKLPPFIVT--------- 158

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L  W         +  ++ +          +  +   +  +     + Y  + M   +
Sbjct: 159 --LGTWSVYGAMVIYVSHSETVRAQDIETMGPLLQWLGHTIRLGGGAVLTYGTIAMIITA 216

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A I   L RTA         D+ +A            ++ + ++     +A         
Sbjct: 217 ALIWYVLNRTAFGRHVYATGDDDEAARLAGINTRGVYIAVYTIAGFICAIASWALIGRIG 276

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             SP   + +    + ++VI      GG  S+        I+                  
Sbjct: 277 AASPLGNQTANLDAITAVVIGGTSLFGGRGSIVGTLFGALIVGVFRNGLALAGVDSLWQE 336

Query: 310 LKFDCSFNMRHTT 322
                   +  T 
Sbjct: 337 FTVGILIILAVTI 349


>gi|254475088|ref|ZP_05088474.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria sp. R11]
 gi|214029331|gb|EEB70166.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria sp. R11]
          Length = 288

 Score = 66.0 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 102/305 (33%), Gaps = 29/305 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY--VILGSRYGLSIWLLI 96
           + S      +Y + A G  ++  +   ++        +GA+    +       L  W+  
Sbjct: 4   LVSGLANGCVYGLIALGFVLIYKATEAVNFAQGDFMMLGAFVTLGLTNAEYLHLPFWIAA 63

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++ +I    G ++ L  L+        A +I++     ++     +  G          
Sbjct: 64  PLAILIMAFFGYLLDLLILRHLFGQSQTAVVILTIALGFVIRFVAGVIWG---------- 113

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                T+ S + F       V+  +    V++    L+ S+  + +RT +  A +    N
Sbjct: 114 -HEPQTLESPLAFGDVSLGGVVLGMADVAVIVVTVLLTWSLYQFFQRTKLGLAMQAASQN 172

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           Q A + +   +   +   + +S A   +AG  FA+     + D       I   +  ++G
Sbjct: 173 QMAAYFMGIPVKRVQGLIWGLSGATAAVAGILFASK---GAIDPNAGLLGIKAFAAAVIG 229

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  SL        I+  +           ++ +                  L  V++ R 
Sbjct: 230 GFGSLPGALAGGLIVGVIEPFAARYLAAGYSQIAP-------------YALLLAVLVFRP 276

Query: 337 HSLLR 341
           H L  
Sbjct: 277 HGLFS 281


>gi|27381522|ref|NP_773051.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354690|dbj|BAC51676.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 284

 Score = 66.0 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 86/303 (28%), Gaps = 29/303 (9%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            ++  + LI  +   GL++V+G L +L++       IGAY+  ++       +  +   +
Sbjct: 10  LNVIYEALILAILVLGLAVVMGLLNVLNIAHGEFIMIGAYAAYVVQRAGLPYLLAVPAAA 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +      ++          +                         G       +  +  
Sbjct: 70  LVCGAIGFVVERCLIRPLHYEPFETL--------------LATWGLGLLLRKCVELAFGR 115

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G     +            Y  +   ++     + A + +W RR       R +  N   
Sbjct: 116 GYRSVEIPIGGSLSLFGESYPAYRLVLMAVAALVLAGLFIWYRRAPTGARIRAMVGNPVL 175

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             ++         + F   +A  G+AG   A             +  +     +++GGM 
Sbjct: 176 AEAVGIQTRELARNTFVTGTALAGVAGVMVAPLTPV--EPFMGLTFIVNSFFALVVGGMG 233

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           ++S +     I+ G+  +                          M++   L +  R   L
Sbjct: 234 TVSGLFAGATIIGGLQSVLS-------------AAVSPTSAYLAMLLISILFLWQRPRGL 280

Query: 340 LRL 342
              
Sbjct: 281 FPR 283


>gi|288960266|ref|YP_003450606.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288912574|dbj|BAI74062.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 289

 Score = 66.0 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 56/301 (18%), Positives = 101/301 (33%), Gaps = 26/301 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  L+Y + A GLS++ G + +++         G Y  V+LG   GL   L  P+ A +
Sbjct: 14  LLTGLVYGLAALGLSVIFGVVRVVNFAHGEMMVAGMYGAVLLGGWIGLDPLLSAPIMAAL 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
             ACG ++    +    +       I+      +L+    +  G     V          
Sbjct: 74  LFACGWLLQRGLVNKFVERPEHMQFILLLGVATVLVNAMLMLFGPDARNVQVPYS----- 128

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                 F       ++ +            ++A++  + R +    A R   DN      
Sbjct: 129 ------FDTVEIGPMLLDAVRLRAGAAAIVVAAALFAFFRFSRTGKAIRACADNPLGARV 182

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   I       F + +A +G+AGA      D            ++   IVI+GG+ SL 
Sbjct: 183 VGLNIDGLYALTFGIGAAVVGVAGALMTLLVDA--RPQLAPEYTLLSFIIVIVGGLGSLP 240

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  ++     L   +      SL  +               L +V+L+R   LL  
Sbjct: 241 GALLGGVLIGMSEALAGFLLTPSLKSLFSYG-------------VLIVVLLLRPQGLLGK 287

Query: 343 R 343
           R
Sbjct: 288 R 288


>gi|209514919|ref|ZP_03263788.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209504545|gb|EEA04532.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 299

 Score = 66.0 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 99/307 (32%), Gaps = 18/307 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++         Y + A G ++V G + L++      + +GA+          L+   L 
Sbjct: 6   QFVVEGLTTGSFYALVALGYTMVYGIIRLINFAHGDLFMVGAFIG--WTGLMMLASAHLP 63

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A++      +    +L    + LA   L+ +     ++         + G+ +    
Sbjct: 64  LALALLIALVAAMTATGALGLLIERLAYQPLLRAPRLSILITALGVSLALQNGVLLIYGA 123

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                T   ++    F    V        +++    L  ++  ++  T +  A R +  +
Sbjct: 124 --GFRTYPHVLSQAGFELHGVQITFAQIGIIVASLALMLALYFFVNHTFLGTAMRALAID 181

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           Q A   +   +       F + S    +AG        +I+  M  F   +   +  +LG
Sbjct: 182 QDAARLMGIDVERLIQLTFLLGSVLAAVAGFMEGLYYTQINFFM-GFVLGLRAFTAAVLG 240

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++        ++  +     G     +  +  F               L  V++++ 
Sbjct: 241 GIGNIPGAMAGGILIGLLEAFGAGYVSSQWTDVFVFC-------------VLIAVLVIKP 287

Query: 337 HSLLRLR 343
             L   R
Sbjct: 288 TGLFGER 294


>gi|27378465|ref|NP_769994.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351613|dbj|BAC48619.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 280

 Score = 66.0 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 98/304 (32%), Gaps = 26/304 (8%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           M +    Y +   GL+++ G + +++    + Y  GAY   I+  + GL+ +L +PV+ +
Sbjct: 1   MLVLGGTYALLGIGLTLIFGIMNVVNFTHGVLYTFGAYIMFIVVQQLGLNFFLALPVAVL 60

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
                G  + L  L+         T+++       +        G     VA        
Sbjct: 61  AGWLLGAAIELTLLRPLRGSDIDTTMLVMIGAWIAMQSGTLWIWGGVAKSVATPFPEAP- 119

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                          V       +VL     L     L + RT++  A R    +     
Sbjct: 120 ----------LVLGPVSVSWLRLFVLAAAALLILVTYLLINRTSLGRAMRATFQDHDTAS 169

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
            +   +     S F++ S+    AGA        +          +   +IVILGG+ ++
Sbjct: 170 LMGVNVDMIYTSTFSIGSSLAAAAGALLGPV--YVIFPQMGDLAAVKAFAIVILGGLGNI 227

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +       IL    EL  G     +   + F             + +  V++ +   L  
Sbjct: 228 TGAVIGGFILALAEELGAGYVSSGYRDAMGF-------------VIIIAVLIFKPTGLFA 274

Query: 342 LRTP 345
               
Sbjct: 275 RAER 278


>gi|239813105|ref|YP_002942015.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239799682|gb|ACS16749.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 290

 Score = 66.0 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 104/304 (34%), Gaps = 25/304 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL+++ G +G+++L     Y IGAY    L   +G    L++   
Sbjct: 11  LNSVQYGLLLFLVASGLTLIFGIMGVINLAHGSFYMIGAYMAFALSPLFGDQFLLMLVAG 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++   G ++      +      +  ++M+     +  + + I  G             
Sbjct: 71  VVLAAIFGYLLEWAFFSYLYQRDHLQQVLMTYGLILVFEELRSILVGNDVH--------- 121

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G  V + +       + + Y  +  +       L+ ++   + RT +    R    N+  
Sbjct: 122 GVKVPAWLDGSFALGNVMSYPWYRLFASAACIVLAVALYWVVNRTRLGMMIRAGASNRDM 181

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L   +       FA   A   +AG   A             S  II   +V++GG+ 
Sbjct: 182 VRGLGIDVKRLYRIVFAAGVALAALAGMIAAPMSSV--YPNMGASVLIICFVLVVIGGIG 239

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S++    A+ ++  V                     F       + + + +V++ R   L
Sbjct: 240 SITGALVASLLVGFVDTFGKVF--------------FADLSGIGIYLLMAIVLIWRPEGL 285

Query: 340 LRLR 343
           +  R
Sbjct: 286 MGRR 289


>gi|149377000|ref|ZP_01894751.1| inner-membrane translocator [Marinobacter algicola DG893]
 gi|149358658|gb|EDM47129.1| inner-membrane translocator [Marinobacter algicola DG893]
          Length = 287

 Score = 66.0 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 98/302 (32%), Gaps = 26/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL++V G +G+L+L     Y +GAY      +  G      +  
Sbjct: 10  LINGIQYGLLLFLIASGLTLVFGVMGILNLAHGSMYMVGAYLVWYFVTVTGSFTVSAVIS 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +      +I  +   +                   +L+    I    +   +      
Sbjct: 70  AIIALTLGILIERVLIQRLYNR----------NHLDQVLLTIGMIFVFNSLQSILFGNDP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  V   +      +    Y I+  +  L    ++ ++   +R T +    R    N++
Sbjct: 120 YGVAVPGALGGGIPFTDNSSYPIYRIFAALICVAIAGALYYVVRSTRLGMLIRAGESNRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+      ++G   A  R  +          I    +V++GGM
Sbjct: 180 MVEALGVNIKSLYTIVFAIGVMLAAVSGIIAAPMRSIVPGMGESVL--ITCFVVVVIGGM 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++       ++  +      +     N               ++ I + LV+L++   
Sbjct: 238 GSITGAFVGALLVGLISTFSSVLMPSMSN--------------MIIYIFMILVLLVKPQG 283

Query: 339 LL 340
           L 
Sbjct: 284 LF 285


>gi|126731239|ref|ZP_01747046.1| branched-chain amino acid ABC transporter, permease protein
           [Sagittula stellata E-37]
 gi|126708150|gb|EBA07209.1| branched-chain amino acid ABC transporter, permease protein
           [Sagittula stellata E-37]
          Length = 430

 Score = 66.0 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 99/274 (36%), Gaps = 21/274 (7%)

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + L  P+  +++     ++G  +L  R DYLAIATL +SEI   I+   + ++ G   +
Sbjct: 157 PVVLAWPMGGLLAAGAAWVIGKTALGLRSDYLAIATLGISEIIIAIMKNEEWLSRGVKNV 216

Query: 151 YVADRLYFLGTTVRSLIRF---------FRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               R     T +++   F             +S +  ++    +   +  +   +    
Sbjct: 217 NGLPRPVPYETALQADPTFVERAVGLGLDPATASTIYVKLGYSLMFAAVLIVLLVLAQLA 276

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +      R IRDN+ +  ++   + +  L  F + SA  G+AGA       +++P  +
Sbjct: 277 LNSPWGRMMRAIRDNEVSARAMGKDVTYRHLQVFVLGSAICGIAGAMMTTLDGQLTPTTY 336

Query: 262 KFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR- 319
           +      ++  +VI+GG  +         ++         +   +   L       +   
Sbjct: 337 QPLRYTFLIWVMVIVGGSGNNLGAVLGGMLIWFFWVQVEPLGQAFMTLLTAGMSDGSWLK 396

Query: 320 ----------HTTLMVIALFLVILMRSHSLLRLR 343
                         M + L LV+      LL  R
Sbjct: 397 GHLLDSVQHMRLLTMGVILLLVLRFSPRGLLPER 430



 Score = 42.5 bits (98), Expect = 0.087,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 2/110 (1%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +N+  K + L A+V  L+LF   G  +S      +    L+  + + G+++  G  GL +
Sbjct: 1   MNQSLKTVLLFALVAALILFT--GFYQSWNTALVILNMGLVSAIMSLGVNLQWGIAGLFN 58

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           +  +   A+G  + V+         W      A+++   G  +   S   
Sbjct: 59  VGVMGFVALGGLAVVLTSVSPVPEAWAAGGPRALLALVVGTAVIAVSAML 108


>gi|53721290|ref|YP_110275.1| ABC ribose transport system, permease protein [Burkholderia
           pseudomallei K96243]
 gi|254195301|ref|ZP_04901729.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei S13]
 gi|52211704|emb|CAH37702.1| putative ABC ribose transport system, permease protein
           [Burkholderia pseudomallei K96243]
 gi|169652048|gb|EDS84741.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei S13]
          Length = 325

 Score = 66.0 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/314 (11%), Positives = 87/314 (27%), Gaps = 29/314 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ V   ++L        + +    +  Q  I  + A G++ V+     + L+     
Sbjct: 27  IPIVFVALCVVLAFASPYFLTWRNWSDILRQTSINGILAIGMTYVI-LTKGIDLSVGSVL 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      + G+        +   + +  GA    +   ++        +ATL M  + +
Sbjct: 86  ALAGIVSGLAGAAGH--GLAVSLAAGVACGAALGAINGVAIARLNVPPFVATLGMLSVAR 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                         G+            +              +    + +  + +    
Sbjct: 144 --------------GVTYIANDGSPVANLPDDYLSLGIGRLGPLGMPVLIFAGVALACWW 189

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                  R T        +  N+K+  +    +     S + VS A  G+AG   AA   
Sbjct: 190 VL-----RYTTYGRYLYAVGGNEKSARTSGIGVRKVVFSVYVVSGALAGLAGMILAARTT 244

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                    S  +  I+ V++GG         +        ++  +      +    +  
Sbjct: 245 SA-LPQAGVSYELDAIAAVVIGGTSLSGGQGGVVGTLFGALLIGVINNGLNLLGVSSYYQ 303

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 304 QIAKGLIIVLAVLI 317


>gi|84502212|ref|ZP_01000360.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
 gi|84389572|gb|EAQ02291.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
          Length = 295

 Score = 66.0 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 103/315 (32%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L +        +    I    Y + + GL+++ G L +++      Y +GA+   +L +
Sbjct: 4   LLGVPPQVLMGQLLIGLINGSFYAVLSLGLAVIFGLLNIINFTHGAQYMMGAFVAWMLLN 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+  W  + +S ++ GA G+++    +        +  L+++     I+        G
Sbjct: 64  YLGIGYWPALVLSPLVVGAIGIVLERTMISRLYKLDHLYGLLLTFGLALIIQGLFRNYYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+  A      G               F+    +  +V++    +       + +T +
Sbjct: 124 VSGLPYAIPPALQG----------GQNLGFMFLPNYRGWVIVASVIVCFGTWFMIEKTRL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N +   +    +       +         AG   A                
Sbjct: 174 GAYLRAATENPELVGAFGINVPRMITLTYGFGVGLAAFAGVLAAPIYSV--NPNMGADLI 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+         L  V  L                  +      ++ +
Sbjct: 232 IVVFAVVVIGGMGSIMGAILTGFGLGIVEGLTRVF--------------YPEGSAVVIFV 277

Query: 327 ALFLVILMRSHSLLR 341
            + +V++++   L  
Sbjct: 278 IMAIVLMIKPEGLFG 292


>gi|18181868|emb|CAD20765.1| integral membrane protein [Rhizobium leguminosarum bv. viciae]
          Length = 290

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 95/303 (31%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +   +Y + A G++++ G L  ++      Y +G +         GLS  + I V 
Sbjct: 10  VNGIVTGSVYAIVAVGMTMIFGVLRAINFAHGEYYMLGTFGAWFAIDYLGLSYEVSIVVG 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + + A   ++G   ++      A + ++ +     IL     +  G             
Sbjct: 70  VLATIAVAYVVGQLVMRRMVGAPAESGVLATLGIALILQNTIILVFG------------G 117

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G    +                    +L+    +   + L +  T +  A R +  N + 
Sbjct: 118 GYKFFAGGYIEPVSILGFSLAEQRILILVVCLLVFIGLELMVSYTRLGMAMRAVSQNVEC 177

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +    L  F + +A   ++G   A     +   M         + I+I+GG+ 
Sbjct: 178 CSVVGIDVPQVVLRTFMLGAALAALSGVLTAPVNVSVYGGM-GELITFKTLPIIIMGGLG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           ++     A  IL     L        F     F               L L+++ R H L
Sbjct: 237 NVRGTFVAAMILGVAESLVATYVGLQFRDTGSFAT-------------LILMLMWRPHGL 283

Query: 340 LRL 342
              
Sbjct: 284 FST 286


>gi|56696727|ref|YP_167088.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56678464|gb|AAV95130.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 291

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 103/305 (33%), Gaps = 29/305 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96
           + S      +Y + A G  ++  +   ++        +GA+  +        GL  WL +
Sbjct: 7   LISGLANGCVYGLIALGFVLIYKATESVNFAQGDFMMLGAFVTIGLTNTEYMGLPFWLAL 66

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P+S  I    G ++    ++        A +I++     ++     +  G          
Sbjct: 67  PISIGIMAGLGYLLDRLVIRRMFGESQTAVVILTIALGFVIRFAAGLIWG---------- 116

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                T+++ +         ++  +    V++    L+ S+ L+  RT +  A +    N
Sbjct: 117 -HEPQTLQNPLAGKELSFGGLVLGLEDVAVIIVTLALTGSLYLFFSRTKLGLAMQGASQN 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           Q A + +   +   +   +A++ A   +AG  FAA     S D       I   +  ++G
Sbjct: 176 QLAAYYMGIPVKRVQGFIWALAGAVAAVAGILFAAK---GSVDPSTGLLGIKAFAAAVIG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  SL        I+  +           ++ +                  L  V++ R 
Sbjct: 233 GFGSLPGALAGGLIVGVIEPFASRYIAAGYSQIAP-------------YALLVAVLVFRP 279

Query: 337 HSLLR 341
           H L  
Sbjct: 280 HGLFS 284


>gi|167564637|ref|ZP_02357553.1| inner-membrane translocator [Burkholderia oklahomensis EO147]
 gi|167571779|ref|ZP_02364653.1| inner-membrane translocator [Burkholderia oklahomensis C6786]
          Length = 294

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 43/318 (13%), Positives = 107/318 (33%), Gaps = 26/318 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +  +     +    +    Y + + GL+++ G L +++      + +GA    +  +
Sbjct: 3   IFGIPMSAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLT 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL  W ++ ++ +I G  G+++    L++  +   +  L+++     ++        G
Sbjct: 63  YLGLPYWAMLVLAPVIVGLFGILIERSMLRWLYELDHLYGLLLTFGLTLVVEGVFRAVYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+    +  +V++    +  +    + +T +
Sbjct: 123 SSGQPYDVPELLSGAT----------NLGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMVTLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +  L                  +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSILTGLMLGVIEGLTRVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLRLRT 344
            + +V+L+R   L     
Sbjct: 277 IMAIVLLIRPAGLFGKER 294


>gi|163758141|ref|ZP_02165229.1| inner-membrane translocator [Hoeflea phototrophica DFL-43]
 gi|162284430|gb|EDQ34713.1| inner-membrane translocator [Hoeflea phototrophica DFL-43]
          Length = 437

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 97/278 (34%), Gaps = 23/278 (8%)

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            I +   V  + +G    ++G  SL  R DYLAIATL +SEI   +L     +T G   +
Sbjct: 160 PIIVSWLVGGLFAGGAAWLIGKVSLGLRSDYLAIATLGISEIIIAVLKNEDWLTRGVKNV 219

Query: 151 YVADRLYFLGTT-----------VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
               R Y +                +         S ++ ++    +   +  +   +  
Sbjct: 220 TGLPRPYPVPYEVEIQQSPVFQSWAAYFEMSAVELSSIVVKLAYTGLFAIVLLILLFLCE 279

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
              R+      R IRDN+ A  ++   +    L  F + SA +G+AGA       + +P 
Sbjct: 280 TALRSPWGRMMRAIRDNETAAEAMGKDVKGRHLQVFVLGSAVVGIAGAMLTTLDGQFTPG 339

Query: 260 MFKFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL--------- 309
            +       ++ ++VI+GG  +         ++         +  ++ + +         
Sbjct: 340 TYNPLRFTFLIWAMVIIGGSGNNWGAVLGGFLVWFFWVEAEPVGLWFIDQMTSGMDEANP 399

Query: 310 --LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
             L    S        M + + LV+      L+     
Sbjct: 400 LRLHLLDSAAYMRLMAMGVIMLLVLRFAPRGLIPESRR 437



 Score = 40.2 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 38/99 (38%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
                 +L + +G  +S     ++    LI  + A G++I  G  GLL++  +   A G 
Sbjct: 10  LFALMAILLVTVGVVQSPSLALAILNLCLISAIMALGVNIQWGYAGLLNVGIMGFAAFGG 69

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
            + V++      +   +     M++ A   +     +  
Sbjct: 70  VAAVLVSMEPVSATIAVGGPGIMVAIAVVAVTIALIVWV 108


>gi|330829630|ref|YP_004392582.1| ribose ABC transporter permease [Aeromonas veronii B565]
 gi|328804766|gb|AEB49965.1| Ribose ABC transporter, permease protein [Aeromonas veronii B565]
          Length = 322

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/312 (9%), Positives = 86/312 (27%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LVALLVLIGVVSALSPNFFTADNLLNILRQTSVNAIMAVGMTLVILTAG-IDLSVGSVLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + +       ++       +   G+   + +                + F  
Sbjct: 82  LCGALAATMVAMELPIWLVVPLTLGAGALLGGVSGLIIAK------------GKVQAFIA 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +          F      Y   +   +  M  +  
Sbjct: 130 TLVTMTALRGITMVYTEGRPISTGFSDGADH-----FAWLGTGYLFGLPVPIWLMAIVFL 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L  T +      +  N+ A       +   KL+ + +  A   +AG    +    
Sbjct: 185 LAWFMLNHTRLGRYIYALGGNESATRLSGINVDRVKLAVYGLCGALSALAGLIVTSRLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 245 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 AKASVILLAVMI 316


>gi|326554406|gb|ADZ89045.1| Bacterial inner-membrane translocator [Brucella melitensis M5-90]
          Length = 293

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 54/315 (17%), Positives = 111/315 (35%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    I    Y M + GL+I+ G L +++      Y +GA+   +L S
Sbjct: 2   IFGIPLQALLGQLLVGLINGSFYAMLSLGLAIIFGLLRIINFAHGAQYMLGAFVGYLLLS 61

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+S W  + ++ +I G  G I+   +L    +   +  L+ +     ++        G
Sbjct: 62  WLGISYWPALVLAPLIVGLGGAIIERVALSRLYNLDPLYGLLFTFGLALVIEGTFRYYYG 121

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            AG   A      G               F+    +  +V++   F+     L + +T +
Sbjct: 122 AAGQPYAVPPSLAG----------GRNLGFMFLPNYRAWVVVASLFVCLGTWLLIEKTKL 171

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N     +    +       +A+ SA  G+AG   A         +   +  
Sbjct: 172 GAYLRAATENPTLVKAFGINVPLLLTFTYALGSALAGLAGIMAAPIYQV--SPLMGSNII 229

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+        +L     L                  +    + ++ +
Sbjct: 230 IVVFAVVVVGGMGSILGAIITGYVLGIAEGLTKVF--------------YPEASSIVVFV 275

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L+R   L  
Sbjct: 276 IMAIVLLVRPAGLFG 290


>gi|318042029|ref|ZP_07973985.1| permease protein of branched-chain amino acid ABC transporter
           [Synechococcus sp. CB0101]
          Length = 313

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 96/314 (30%), Gaps = 25/314 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G +++   LG+++      +++G Y   +L          L   
Sbjct: 9   LLNGAASGGVYALVALGYTLIFSVLGVINFAQGALFSLGGYLTYLLMGGKIGVNGALPGW 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S  IS    + + L +L      L +  +  + + +        +        V   L  
Sbjct: 69  SLPISLPFWLALVLAALGSGLVGLLVERIAFAPLRRRGAEPLLSLITSLGAGVVLVNLLQ 128

Query: 159 LGTTVRSLIRFFR----------FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           L                                    +LL       ++ LWL R+    
Sbjct: 129 LLMGAEGYAFPQGAAALAQLPESLLIGGARIRTIQVLLLLISALAVVALSLWLERSRSGK 188

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           A R + ++      L          AF +S    G+ G     S   ++   F  S  + 
Sbjct: 189 AMRAVAEDATTATLLGINSEAIVRLAFLLSGMLAGLGGGLIGMSV-SLAGPYFGISYGLK 247

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
            +++++LGG+ S+        ++     L                 + +     L    L
Sbjct: 248 GLAVLVLGGLGSVPGAIVGGLVMGLAEALI--------------PAAASGWRDALAFAIL 293

Query: 329 FLVILMRSHSLLRL 342
           F V+++R   LL  
Sbjct: 294 FAVLVLRPSGLLGR 307


>gi|302343489|ref|YP_003808018.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075]
 gi|301640102|gb|ADK85424.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075]
          Length = 288

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 54/288 (18%), Positives = 102/288 (35%), Gaps = 13/288 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y  FA GLS++ G +G+L++       +GA+    L    GL     +P+
Sbjct: 7   LINGLLAGGVYAAFATGLSLIFGVMGVLNIAHGELVMLGAFVCAGLFHGLGLGPLWSLPL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S  +  A G +M    L        + + I++     I+     +               
Sbjct: 67  SFGLMFALGYVMQRLFLAPIAGRPPVMSYILTFGLHLIIANLALLAWSAD---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V +           +   +    V L    +   + L+L RTA   A R    +++
Sbjct: 117 -PRAVTTPYSGAGLRLWGLDLPLLKSMVCLAALAMVGGLHLFLSRTAWGRAIRATAQDRQ 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       FA+ +   G++GA  A  RD            I+   +V++GGM
Sbjct: 176 AAELMGVDVGKVFALTFALGAGLTGLSGALVAMVRDV--DVAMGLPYTILAFCVVVVGGM 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             L       A+L  V ELC  +    ++  + F   +         +
Sbjct: 234 GYLPGALIGGALLGVVGELCTALISPGWSLAIMFTILYLTLLLRPAGL 281


>gi|281413036|ref|YP_003347115.1| inner-membrane translocator [Thermotoga naphthophila RKU-10]
 gi|281374139|gb|ADA67701.1| inner-membrane translocator [Thermotoga naphthophila RKU-10]
          Length = 307

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 87/291 (29%), Gaps = 7/291 (2%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
               + + +  +   +Y + A G ++V G L L++        +G Y      +   L+ 
Sbjct: 10  VFFLQNLFNGIMLGGLYALIAIGYTMVYGILRLINFAHGDVMMMGVYFAFYAATLLSLNP 69

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
                V+ + +   G ++   + K   +   I+ LI +      L     +  G      
Sbjct: 70  LFSAIVAILGAAVLGFLIDRVAYKPLRNAPRISALITAIGVSFFLESLAVVVFGAI---- 125

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                FL       I       +     +  + V+     +   +   + RT I  A R 
Sbjct: 126 --PKSFLNVFKDRTILNKVLTLAGARIPLLTFLVIFITIVILIVLFFIVYRTKIGMAMRA 183

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  +      +   +       FA+ SA    +G  +A     + P M  F   +     
Sbjct: 184 ISMDIPTTALMGVNVDAVIGFTFALGSALAAASGIMWAMRFPNVHPYM-GFMPGLKAFIA 242

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            + GG+ S+        +L  +                 F     +    +
Sbjct: 243 AVFGGIGSIPGAVLGGVLLGLIEIFLAAYFPAVMGYRDAFAFIILIIILLV 293


>gi|121607886|ref|YP_995693.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121552526|gb|ABM56675.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 295

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 89/310 (28%), Gaps = 20/310 (6%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                    +  +   +    A GLS++ G L +++        +  Y+   L    G+ 
Sbjct: 3   PYILTYAWLNGILVGAMLGGIALGLSLIFGVLRIVNFAHGSFLMLALYTAFWLQKLGGID 62

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            +L +P++A +  A G  +    +           +               I N     +
Sbjct: 63  PYLSVPIAAPLMFALGYCVQCIVIGPLIRRERALVVEPISALLLTAGVCILIDNLALMAF 122

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
             +          S +R   F         F          L+  + LWL  T +  A R
Sbjct: 123 GPNVRST-----PSALRVGSFMLGPFPVNSFRVIAAAAALVLATGVWLWLAHTDMGRAIR 177

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
               N+ A       +       F +  A +G+ G   A             +  I    
Sbjct: 178 ATAQNRDAAAMSGIDVPLVYNVTFGLGCALVGVMGCLIAPFIPI--TPQVGLTFGIKSFI 235

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +V+LGG+ S++       ++     L          S+                    L+
Sbjct: 236 VVVLGGIGSIAGSLVGGIVIGLFESLAAQFVATPTASIFSLG-------------LFILI 282

Query: 332 ILMRSHSLLR 341
           +LMR   L+ 
Sbjct: 283 LLMRPQGLMG 292


>gi|297184443|gb|ADI20558.1| hypothetical protein [uncultured alpha proteobacterium
           EB080_L84F03]
          Length = 326

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 62/336 (18%), Positives = 135/336 (40%), Gaps = 20/336 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
                 I  ++ +    +    +     +         + +  + + G+ +    +G ++
Sbjct: 4   FTSKQLIGVVIFLFMIFIGVPLIIGATGRWDFYFTLTSVALLAIASAGVWLTF-YIGRIN 62

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           +       IGAY   IL  + G S WL +P + + +    +++GLP L+ RG Y A+ TL
Sbjct: 63  IGQGAFALIGAYVSAILVVKAGWSFWLSLPAAGLFAALVAILLGLPILRLRGVYFAMITL 122

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           +++++     +    ITNG  GI        +      ++  F    +    ++  Y+  
Sbjct: 123 VLTQVVTLTALALP-ITNGARGISNIPLPSGISVFGIPILPDFAAMEN---TKLAFYFTA 178

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  L+ + +  L  + + +  R+++ N++   S+   I + ++  FA+SS F G+ GA
Sbjct: 179 CIIMILTYAALYRLVNSRLGHLCRSMQQNEELASSIGVNISYIRIVIFAISSFFGGLGGA 238

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            F +    + P  F+ ++++  +    LGG+  +      T +L    +L          
Sbjct: 239 MFGSIAQSVYPSSFQVADSVNFMLNCFLGGLGYVFGPMLGTLVLYFGWDLL--------- 289

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                   F      +    L ++I    + LL LR
Sbjct: 290 ------FEFGKYQMLIYSTILIIIIRFLPNGLLSLR 319


>gi|319762267|ref|YP_004126204.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|330825803|ref|YP_004389106.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317116828|gb|ADU99316.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|329311175|gb|AEB85590.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 444

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 46/332 (13%), Positives = 106/332 (31%), Gaps = 33/332 (9%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++      +  +      +     +M  QI    +     +I++G  G+LS    +   +
Sbjct: 29  IVIWSLFAIALIAAPRLFTSGLALTMLSQIGYATIICLSYNILLGQGGMLSFGHAVYTGL 88

Query: 77  GAYSYVI-----LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           G++  V         +  + +WL+  V  +      +++G  + K  G   A+ TL + E
Sbjct: 89  GSFITVHAINMAGAGQLPIPLWLMPLVGGLAGMFFAVLLGFVTTKKSGTTFAMITLGIGE 148

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +  ++ + +     G+ GI                +    F        I +YY++   C
Sbjct: 149 LVASMALMFPEFFGGEGGIT------------TDRVYGQPFFGITFGPAIQVYYLIAAYC 196

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           F+  + +     T +      +RDN +    +       +  AF ++  F G+ GA  A 
Sbjct: 197 FVCTAAMYAFTGTPLGRILNAVRDNPERVEFIGYNTQRVRYFAFIIAGFFAGIGGALAAI 256

Query: 252 SRDRIS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           + + ++  D      +   +    LGG T                               
Sbjct: 257 NFEIVTGADSVSVVRSGGYLLFTFLGGATFFFGPIIG---------------AVLLVLAS 301

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 +      + +    +++     +  L
Sbjct: 302 VLLSELSKAWLLYLGLVFLFMVMYAPGGIASL 333


>gi|163758138|ref|ZP_02165226.1| ABC sugar transporter, inner membrane subunit [Hoeflea
           phototrophica DFL-43]
 gi|162284427|gb|EDQ34710.1| ABC sugar transporter, inner membrane subunit [Hoeflea
           phototrophica DFL-43]
          Length = 365

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 15/324 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGA--TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           L++   ++ L+ +V  LL+F  L      S   +  +  Q+ I  + A   S+++ + G 
Sbjct: 39  LHENPALVPLIVLVMSLLVFAVLVGERFFSPFAMTLILQQVQIVGVLAAAQSLIILTAG- 97

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+      + +     +  RYG+   L IP+  +     G   G    + +     + 
Sbjct: 98  IDLSVGAIAVLCSVVMGQVTFRYGIPASLAIPIGLLAGTLIGAASGWLVARVKLPPFIVT 157

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
             +   +     I     T     I     L     T   +           I    ++ 
Sbjct: 158 LGMWQIVLAANYIYSANETIRSQDIEAEAPLLQFFGTSFKVGADEAGRGGATITLGVVFM 217

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           V L        +   LR TA       + D+ +A       +    +S +AV       A
Sbjct: 218 VFLF-----LLLTYVLRHTAWGRHVYAVGDDPEAAELAGVNVKRTIISVYAVVGLICAFA 272

Query: 246 GAFFAASRDRISPD-MFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELC 298
                     +SP        NI  I+ V++GG+       S+        I+       
Sbjct: 273 AWVMIGRFGSVSPSATTGVIGNIQSITAVVIGGISLFGGRGSILGALFGALIVGVFELGL 332

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTT 322
                    + L          T 
Sbjct: 333 RMYGADPQWTFLLIGVLIIGATTV 356


>gi|27378773|ref|NP_770302.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351922|dbj|BAC48927.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 309

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 89/304 (29%), Gaps = 29/304 (9%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +   +YV+ A GLSI+ G LG+++      +A+GAY    L   +    W  +   
Sbjct: 30  VNGLVLGFLYVLIAIGLSIIFGMLGIVNFAHGAFFAVGAYLAYALAKEF--GWWGALAAP 87

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +      ++  +      G    +  ++   +        + I  G    + A +    
Sbjct: 88  LLTGAIGVVVEMVLIRHLYGKEPLLGLILTFALALLAEAVLRLIFGGAPVPFAAPKFLAG 147

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                            ++   +  +VLL       +   +L  T      R    + + 
Sbjct: 148 FV-----------EYGPILITKYRMFVLLTTALTLVAFWAFLAYTPYGRIIRAGSRDPEM 196

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L   +       F +     G+ G   A                +    IV +GG+ 
Sbjct: 197 VGLLGINLPIVFSGVFGMGCLLAGLGGLLAAPLWTITPSMAAGAI--MPAFVIVTIGGLG 254

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S      A  ++     +       +  +               M I +  ++L+R   L
Sbjct: 255 SFLGAVVAGLLVGITTAMTIQFQPEWSGAA--------------MYILMAAILLVRPRGL 300

Query: 340 LRLR 343
              R
Sbjct: 301 FGER 304


>gi|332527105|ref|ZP_08403184.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2]
 gi|332111535|gb|EGJ11517.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2]
          Length = 309

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 98/309 (31%), Gaps = 16/309 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A +     + +         +
Sbjct: 8   LIGGLMTGMLYALVALGFVLIFKASGVFNFAQGAMVLFAALAMARFSAWFPAWFGFESQL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN----GKAGIYVAD 154
            A +      +  +  + +  + L +  L+  E    ++            G+       
Sbjct: 68  LANLLAIVAAMAVMIVVAWAIERLVLGKLVNQEGVTLLMATLGIAYFLEGLGQTIFGNDI 127

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
               +G     +          ++      Y  L    L A++ L+ ++TA   A R + 
Sbjct: 128 YPIDVGLPKDPVFLLESTFEGGILVNKEDLYAALIAAALVAALSLFFQKTATGRALRAVA 187

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           D+ +A  S+   +    +  ++V+     +AG  + +               +  + +VI
Sbjct: 188 DDHQAAQSIGIPLNRIWVIVWSVAGFVALVAGIIWGSKLGVQFSLS---LVALKALPVVI 244

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           LGG+TS+        ++    +L            ++   +          +   + + +
Sbjct: 245 LGGLTSVPGAIVGGLLIGVGEKLSEVYVGPMLGGGIEIWFA---------YVLALVFLFV 295

Query: 335 RSHSLLRLR 343
           R   L   +
Sbjct: 296 RPQGLFGEK 304


>gi|291458416|ref|ZP_06597806.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291418949|gb|EFE92668.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein LivH [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 292

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 54/307 (17%), Positives = 100/307 (32%), Gaps = 27/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     + Y + A G S+V G L L++ +    YA GA   ++      L I   I +
Sbjct: 6   IFNGLALGMGYALIAVGYSLVFGILRLVNFSHGSVYAFGAEIAMVFIVSMRLGIIPGILL 65

Query: 99  SAMISGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           S + +G  G+++   +     +     IA+LI +    NI+     I  G          
Sbjct: 66  SMLFTGILGILIDKAALEPLRKKGSPPIASLITTIGISNIVTNLLIIFLGSE-------- 117

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   +               +    + +    L   ++  + RT I  A R  + N
Sbjct: 118 ---KRNFPNFFGHSGIHLLGGTVSMTQIMMCVISVILMLILVFIVFRTKIGLAMRASQQN 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            KA   +   + F     F ++     +AG   A   + + P+M  F   +   S  +LG
Sbjct: 175 AKAARMMGIDVNFVIRFTFFLAGVSAALAGVLIAGYYEIVYPNM-GFMAGLKAFSAAVLG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ SL        I+     +        +   + F     +                R 
Sbjct: 234 GIGSLPGAILGGLIIGNAESMAVMFLGSTYRDSVAFIILILVLIL-------------RP 280

Query: 337 HSLLRLR 343
           + L   +
Sbjct: 281 NGLFGRK 287


>gi|27377382|ref|NP_768911.1| sugar ABC transporter permease protein [Bradyrhizobium japonicum
           USDA 110]
 gi|27350526|dbj|BAC47536.1| sugar ABC transporter permease protein [Bradyrhizobium japonicum
           USDA 110]
          Length = 352

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 97/301 (32%), Gaps = 23/301 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +  L LL VV   +  L   A  S   + +M   I ++ +FA G  +V+   G + L+
Sbjct: 3   KKELGLGLLLVVISAITGLINPAFLSLVNLLNMANLIGLFGVFALGEGLVI-ITGGIDLS 61

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
               +A+    ++ L + + +   L +    +     G I GL   + +     +    +
Sbjct: 62  LGSMFALLGVIFIDLLTTHQVHWPLALLAVLLGGLVLGAIQGLLVTRLKMQPFIVTLCGL 121

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                         T G                           +        +    + 
Sbjct: 122 LIYRGAARYYTSDSTRG----------------FGYGDEAGTLSNIASGNLAGIPNTFIL 165

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  + + L R+        +  N++A             +A+ +S    G++   F
Sbjct: 166 LIVLALVLGVLLHRSVYGRWLYAVGKNEEAARFSGINTNLVIATAYIISGGLAGVSTVLF 225

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNF 303
               + +SP  F     +  I+  +LGG        S+  I   TA+L  +  L   +  
Sbjct: 226 VFYTNSVSPSSFGNFYELYAIAAAVLGGCSLRGGEGSILGIVLGTALLQVLQNLVNILGI 285

Query: 304 Y 304
            
Sbjct: 286 P 286


>gi|302344563|ref|YP_003809092.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075]
 gi|301641176|gb|ADK86498.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075]
          Length = 295

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 103/304 (33%), Gaps = 22/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++        +G Y+     + +GL  W  +  
Sbjct: 10  LINGLSLGSLYALIAIGYTMVYGILRLINFAHGDVLMVGCYAAFFGQAIFGLPWWAGLAG 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  ++   G ++   + +       I+TLI +     +L     +  G           F
Sbjct: 70  AMALTALLGALIEAGAYRPLRAAPRISTLIAAIGVSFLLQNLAIVFFGGRAKAFQRPEVF 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V  +    +  L    L   ++L LRRT +  A R +  +  
Sbjct: 130 DQVYQWGQ----------VRVQALGLWTPLVTALLLIGLLLLLRRTRLGLAMRALSRDMT 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +      AFA+ SA   + G F+A    +I+P            ++ ++ G+
Sbjct: 180 TVGLMGVDVNRVVAMAFAIGSALAAVGGVFWAMKYPQINP------------AMGVMPGL 227

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            + +         +G       +       L+    +++     L  + L  V+L R   
Sbjct: 228 KAFTAAVLGGIGNVGGAVAGGLVLGLAEILLVALLPAYSGYKDALAFLLLIGVLLFRPTG 287

Query: 339 LLRL 342
           ++  
Sbjct: 288 IMGR 291


>gi|299134318|ref|ZP_07027511.1| inner-membrane translocator [Afipia sp. 1NLS2]
 gi|298591065|gb|EFI51267.1| inner-membrane translocator [Afipia sp. 1NLS2]
          Length = 291

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 53/303 (17%), Positives = 102/303 (33%), Gaps = 27/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      I VM A GLSI+ G LG+++ +    + +GAY+  +  +    S W  + V
Sbjct: 10  LFSGIALGAILVMAALGLSIIFGMLGVVNFSHGAMFMVGAYA-GLWVASLTGSFWWGLLV 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +  G  GM +    ++          L+++     +L++   I  G  GI        
Sbjct: 69  APLTIGVFGMAVEFLLIRPLYGRSVDDPLLLTFGLGYVLVEAVRIVFGSDGIPFPTPSQL 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                  + I+  +V+  +  +  ++ L L +T      R    + +
Sbjct: 129 RGV----------VNLGIGYFPIYRLFVIGVVGVILLTLWLLLEKTKFGLIVRAGARDPQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   I    L  F +      + G   A  R                  + ++GGM
Sbjct: 179 IMRVLGVDIGKVWLLVFGLGVGLTALGGVLAAPMRTV--NPEMGSLVLAEAFVVTVIGGM 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL+    A  ++   V +   +                     +M   + L++L+R   
Sbjct: 237 GSLAGSVVAGLVVGIAVSMTSLIA--------------PEMAQIVMFALMALILLVRPQG 282

Query: 339 LLR 341
           L  
Sbjct: 283 LFG 285


>gi|148256550|ref|YP_001241135.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146408723|gb|ABQ37229.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 331

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 57/328 (17%), Positives = 118/328 (35%), Gaps = 29/328 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L++ V   +L               +  + L+ +  A   +++ G  GL+S    +  
Sbjct: 3   LRLVSGVVASILLSAGAPFVLGDGALRLWTEALLILTMAQMWNLLAGYAGLVSFGHQVFV 62

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A GAY+  +      +S + ++P++ + +     ++ LP  + R  Y +I   + SEI  
Sbjct: 63  AAGAYALFLAAEALNVSPYWVLPLAPLAAAFLAALVALPLFRLRDAYFSIGIWVFSEIVA 122

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++ K                   L      L            +E  ++++   +   +
Sbjct: 123 TLVTK-----------------SSLTGATAGLPLKTSSLMDLDWFEPTLFWIASVLALAA 165

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF-FAASR 253
            + +L L R+       ++RDN  A  S+   +   +L  F +S+A  G AGA  F ++ 
Sbjct: 166 TAGLLLLMRSEFGLGIMSVRDNDVAAMSVGVDVQRNRLIVFVISAAGCGAAGAVNFLSNL 225

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
                  F  S  + ++ IV++GG+ +L      T +   + E+  G             
Sbjct: 226 YLSPASAFDVSWVVNMMFIVVIGGIGTLEGPIIGTLLFFALREIVTGQLG---------- 275

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                 +   +       +L     L  
Sbjct: 276 -LSGGWYLVALGSVAVGTMLWSPRGLWP 302


>gi|288932043|ref|YP_003436103.1| inner-membrane translocator [Ferroglobus placidus DSM 10642]
 gi|288894291|gb|ADC65828.1| inner-membrane translocator [Ferroglobus placidus DSM 10642]
          Length = 298

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 50/308 (16%), Positives = 98/308 (31%), Gaps = 19/308 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             +    +   IY +   GLSI+ G L ++++       IGA++   L   YG+     +
Sbjct: 9   SNLIYGLLLGTIYGISTMGLSIIFGVLRIVNVGHGAFVMIGAFTVYWLFVLYGVIPPAAL 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + +     G  +    +K   D   +ATL+ +  +  ++ +      G          
Sbjct: 69  FFALLFGMIIGFAIFYSGIKRLVDAPELATLLATFGYGLLIEELAKFFWGPEFYGY---- 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                +         L   FL+ S+  ++R+T    A R + ++
Sbjct: 125 ---------SWDVGSINLGITLIPYPKLLAALLSVFLAFSVYTFIRKTKFGMAIRAVVED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +    +      +FA+  A   M G   A                +    I +LG
Sbjct: 176 REGALACGINVNRIYALSFALGIALTMMGGVLVATYTPVGINVYMGGGYTLKAFVIAVLG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S      A  +           N  Y    L            +  + L +++L+R 
Sbjct: 236 GLASPIGSFYAGILFGLFE------NGSYTLLGLIPGIEPFAMTRFIAFVFLLIILLVRP 289

Query: 337 HSLLRLRT 344
             LLR   
Sbjct: 290 TGLLRGEE 297


>gi|148252245|ref|YP_001236830.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. BTAi1]
 gi|146404418|gb|ABQ32924.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 379

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 44/355 (12%), Positives = 99/355 (27%), Gaps = 36/355 (10%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           +++     L+  V  LLL + +       +  ++  + L Y   A GL +  G  G+LSL
Sbjct: 5   SRFFNRSELIGFVSLLLLLVVILPLALDVFRLNLVAKYLTYAFVAIGLVLCWGYGGILSL 64

Query: 69  NCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
              + + +G Y   +                       +                     
Sbjct: 65  GQGVFFGLGGYCMAMFLKLEASSVANTKIQSTPGIPDFMDWNQLTQLPFFWKPFQSFPFA 124

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI--------- 167
                L  A             +   +        +A  +  L    +            
Sbjct: 125 LAAIILVPAIFSFIIGAAMFKRRVGGVYFAIITQAIAAIMTILIVGQQGYTGGINGITDL 184

Query: 168 -RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                +       +  +Y+V +   F++  +  ++R T +      +R+ +        +
Sbjct: 185 RTLHGWDIRTDHAKYILYFVEVFFLFVAILVAQFIRLTKLGRILVAMREQEDRVRFSGYS 244

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +   K+ AF  ++ F  + GA F      +SP       +I ++    +GG  S+     
Sbjct: 245 VANFKIFAFCAAAVFAAVGGALFTLEVGFMSPSFVGIVPSIEMVIYTAVGGRLSIFGAVY 304

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            + ++                       +F       +      V+L   + L  
Sbjct: 305 GSLLVNFAKTSLSE--------------TFPQLWLFGLGALFIAVVLAFPNGLAG 345


>gi|168704638|ref|ZP_02736915.1| Putative Sugar (D-ribose) ABC transporter (permease protein)
           [Gemmata obscuriglobus UQM 2246]
          Length = 325

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 91/297 (30%), Gaps = 14/297 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + +   +L L+A    + LFL          +  +      Y +   G ++V+   G + 
Sbjct: 1   MTRLLGVLGLVA-ALYVALFLSHNRAGEASNLIDVASYQGQYGIITLGAALVI-ITGGID 58

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A GA  +  L +R     +  +P   +     G + GL   + R     +   
Sbjct: 59  LSIGSVVACGAVLFGFLVNRGAH-PYAALPAVLLFGAGVGAVNGLLVTRVRLQPFLVTLC 117

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            M      +      +  G  G+      +         +RF     S     +      
Sbjct: 118 GMF-----VFRGVARLLEGTVGLNQTIEAHQEFAGALRTLRFVLTGKSPENGALLFPAQF 172

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +  L+A    +L RTA    W  I  ++ A       +   +L+ +   S    + G 
Sbjct: 173 VLLLALAAVAGFFLHRTAYGRYWYAIGHSELAAKYAGVDVNRHRLTVYVSCSTLAALTGV 232

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELC 298
                   +  +       +  I   +LGG        +   +     +L  +  + 
Sbjct: 233 LLFLHAPSVQSNNAGLGWELYAILGAVLGGCSLRGGEGTAVGVVLGAMVLPVIESIV 289


>gi|170741426|ref|YP_001770081.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168195700|gb|ACA17647.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 329

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 100/276 (36%), Gaps = 29/276 (10%)

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S      + + +Y        +GLS  L I      +   G++ G  +++ +G Y ++ T
Sbjct: 74  SFGHAAYFGMASYVCAYGAKVWGLSPELAILAGTATAALLGLVFGALAIRRQGIYFSMIT 133

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L ++++     ++    T G+ GI    R                F    +  +  +Y +
Sbjct: 134 LALAQMVFFFSLQA-KFTGGEDGIQAVPRGS-------------LFGVVSLADDRVLYGL 179

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +      +I  +  +      + IRDN+    SL       KL+ F +S+   G+AG
Sbjct: 180 VALIFLGGLLLIYRIIHSPFGQVLKAIRDNEPRAISLGYRASQYKLAVFVLSTTLAGLAG 239

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A  A      S     +S +  V+ + ++GGM ++        +++ +            
Sbjct: 240 ATKAIVFQLASLTDVHWSMSGEVVLMTLVGGMGTVFGPIIGAFVIVAMENYLA------- 292

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                    F    T +  I   + +L+    ++ L
Sbjct: 293 --------QFGAWVTIIQGIVFVICVLLFREGIVGL 320


>gi|94309161|ref|YP_582371.1| inner-membrane translocator [Cupriavidus metallidurans CH34]
 gi|93353013|gb|ABF07102.1| ABC-type transporter, livH-like permease component [Cupriavidus
           metallidurans CH34]
          Length = 304

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 89/305 (29%), Gaps = 13/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  L+Y + A G  ++  + G+ +          A + V L  +       +I  
Sbjct: 8   LIGGLLSGLMYSLVALGFVLIYKASGVFNFAQGAMVYFAALAVVGLMDKGLPMWAAVIGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++             K          +          I       G   +   + +  
Sbjct: 68  FIVMIIVGMSTERFVLRKLVNQPPITLFMAT--------IGLSFFLEGLGPLLFGNEVRP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   +             ++   F     L    L A + L+ + T +  A R + D+ +
Sbjct: 120 IQLGIVDEPIESILTRFNIVVSKFDLAAALIAAVLVAGLALFFQYTKVGRALRAVADDHQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL   +       + V+     +AG  + +               +  + ++ILGG 
Sbjct: 180 AALSLGIPLQNIWAIVWGVAGFVALVAGMLWGSRN---GVQFALTLTALKALPVLILGGF 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+    +L        F S+   +          +   L   +L+R   
Sbjct: 237 TSVPGAIVGGLIIGASEKLAEIYIPPVFQSVFGGNFGGIEGWFPYVFALL--FLLVRPEG 294

Query: 339 LLRLR 343
           L   +
Sbjct: 295 LFGEK 299


>gi|332671140|ref|YP_004454148.1| inner-membrane translocator [Cellulomonas fimi ATCC 484]
 gi|332340178|gb|AEE46761.1| inner-membrane translocator [Cellulomonas fimi ATCC 484]
          Length = 385

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 52/308 (16%), Positives = 100/308 (32%), Gaps = 8/308 (2%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 Y +     +  Y+    GL+++VG  G LSL      A G Y Y +       +
Sbjct: 28  TFLLDPYRNYQLALVAAYLCATAGLTVLVGLSGQLSLGHAALMAAGGYGYALTAGALPDA 87

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
              L   + ++ GA         L   G  L    L    +   + +     +    G  
Sbjct: 88  PGALRVAAGLLGGAVLSGAVGLLLGLAGARLHGPYLAGLTLTLVVALPAIASSVRALGGD 147

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              R                     +  E +  +V + +      ++  L R       R
Sbjct: 148 QGVRAPLEPVPDALRR--------VIALEQWHAWVAILVTAAVLGVLHVLVRGRTGLRLR 199

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +RD+  A          AK+ AF VSS   G+ GA  A     ++P  +  + +++++ 
Sbjct: 200 AVRDDATAAALAGIAPGRAKVLAFVVSSVAAGLGGAVLAVVTQTVAPGGYGLATSLLLLV 259

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
            V++GG+ SL   A    +++ +  L   +                     +  + L ++
Sbjct: 260 AVVVGGLGSLRGAAAGAVLVVLLPWLVGTVVDALPVPGELAQRLDGNLALLVFGLLLVVL 319

Query: 332 ILMRSHSL 339
           +      L
Sbjct: 320 MAAAPTGL 327


>gi|317494625|ref|ZP_07953037.1| branched-chain amino acid transport system/permease
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917227|gb|EFV38574.1| branched-chain amino acid transport system/permease
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 326

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 88/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 27  LIALLVLIAVVSSMSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      +   +    A+ +   G    + +                + F  
Sbjct: 86  VTGAVAASIVGLEVNAFIAVFAALALGAAIGGCTGVIVAK------------GKVQAFIA 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +    L  +F      +   + +   +  M  + A
Sbjct: 134 TLVMMLLLRGVTMVYTNGSPINTGFSDAADLFGWFG-----IGRPLGIPTPIWLMVIVFA 188

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L  T +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 189 LAWYMLHHTRLGRYIYALGGNESATRLSGISVDRVKIIVYSLCGLLSALAGVIEVARLSS 248

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 249 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIMGTLIGALILGFLNNGLNLLGVSSYYQMI 308

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 309 VKAVVILLAVLV 320


>gi|310659711|ref|YP_003937432.1| d-ribose ABC transporter membrane protein [Clostridium sticklandii
           DSM 519]
 gi|308826489|emb|CBH22527.1| D-ribose transporter subunit ; membrane component of ABC
           superfamily [Clostridium sticklandii]
          Length = 310

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 97/312 (31%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V+ +++        +   I ++  Q  I  + A G++ V+   G + L+      
Sbjct: 12  LIGLIVFSVIVAFINSRFMTTSNILNILRQTSINAVIATGMTFVI-LTGGIDLSVGSILG 70

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                  ++ +    S+ + IP + ++    G + G+   K +     +    M+ +   
Sbjct: 71  FSGAVAAMMLASGVDSL-IAIPTALVVGLIAGGLNGVLISKGKLQPFIVTLATMTMLRGA 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+       G      +    +                    Y + +   ++ +     
Sbjct: 130 TLVFTDGKPIGTGFEANSKLFAWF----------------GNGYVLGIPVPIIVIIVTFL 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +  L +T I      +  N++A      +    K+  +A+S     +AG    +    
Sbjct: 174 VALFVLTQTKIGRYVYALGGNEEATKLSGISTDKVKIFVYAISGMMAALAGIIITSRLSS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG  ++        I+  +      M+   +  +L
Sbjct: 234 AQPTAGSGYELDAIAAVVLGGTSLAGGTGTIVGTMIGALIIGVLNNALNLMDVSSYFQML 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 AKGSVILLAVLL 305


>gi|86138926|ref|ZP_01057498.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85824573|gb|EAQ44776.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 336

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 80/312 (25%), Gaps = 19/312 (6%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY----VILGSRYGLSIWLLIPVSAMISG 104
             + A G++++   L   +       A G         +L S       L   + A+  G
Sbjct: 25  LALGALGVTLIYSILRFSNFAHGDTMAFGTMMTILVTWLLQSWGVSFGPLPTALLALPFG 84

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL----- 159
               +  +            A      +F  + +    + NG     +            
Sbjct: 85  ILATMALVLITDQTVYRFYRAQKAKPVVFVMVSLGVMFMMNGLVRFIIGPGDQRFADGER 144

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                   +        +  +      ++    + A +  +L +T    + R   DN+  
Sbjct: 145 FIIKARAFKEMTGLREGLAIKTSQGITVITAIVVVALLFWFLNKTRTGKSMRAYSDNEDL 204

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                       +  + + +A   +AG  +   +         F   + + +  I+GG+ 
Sbjct: 205 ALLSGINPDRVVMYTWLIVAALATIAGVLYGLDKSF--KPFTYFQLLLPIFASAIVGGLG 262

Query: 280 SLSKIAKATAILIGVVE--------LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           S         I+             +                         +    L +V
Sbjct: 263 SPQGAIAGGFIIAFSEVTITYAWKKVLNYALPDSLAPDGLVQLLSTDYKFAVSFAILIIV 322

Query: 332 ILMRSHSLLRLR 343
           +L +   L + +
Sbjct: 323 LLFKPTGLFKGK 334


>gi|288917025|ref|ZP_06411396.1| ABC transporter related protein [Frankia sp. EUN1f]
 gi|288351565|gb|EFC85771.1| ABC transporter related protein [Frankia sp. EUN1f]
          Length = 912

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 98/257 (38%), Gaps = 16/257 (6%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
              L        L+++V   G +SL  V   AIGA     L    GL   L + +S +++
Sbjct: 335 TSGLALTTVFLSLTLLVRMSGQVSLCHVTFMAIGAAGLSHLTQGQGLPWGLALLLSGLVA 394

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
              G ++ +P+++  G YLA+AT     + Q++          + G     R        
Sbjct: 395 VPVGAVLAIPAIRLGGIYLALATFGFGVLVQSMFYTQDWFFGTQPGGVTVGRPT------ 448

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                     +  +  +   YY++LG+    A +++ + R  +      + D+  A  + 
Sbjct: 449 ----------AGGLGDDKPFYYLVLGITLACALMVVGISRGRLGRLLGGMADSPSALETS 498

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
            TT+   ++  F +S+    + GA ++A+    S   F    ++   ++VI+    +   
Sbjct: 499 GTTVNITRVLVFCLSAFLAAIGGALWSANLGSASIGDFPPLLSLQYFALVIILVGRTPWD 558

Query: 284 IAKATAILIGVVELCCG 300
              A   L  +      
Sbjct: 559 ALLAGLPLAVIPAYFQS 575



 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/305 (9%), Positives = 71/305 (23%), Gaps = 21/305 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +I        +Y +   GL +   + G+ +        + AY +      +G S     
Sbjct: 6   PFIFIGLSTGAVYGLAGVGLVLTYRTSGIFNFAHGALATVAAYLFYDTTVLHGWSPVWAA 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ ++ G    +      +          +  +     I+     +  G     V    
Sbjct: 66  ALAVLVLGPLLGLFLELIARRIQGATLAVQVAATVGLLLIVQAAALLHYGSIMPRVVP-- 123

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                          +        + L+LR      A   + D+
Sbjct: 124 --------EYFPDGTVEVFGAFLSYANIVTFVVTAVAVLVLSLYLRYARRGIATLAVVDD 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +      T  +  +  A+ + S     +G   A                +       +G
Sbjct: 176 PELLALAGTNPVTTRRLAWIIGSTLAAGSGVLLAPLVPL--DPTRLTLLVVSAFGAAAIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV----I 332
              S+         +  +  LC       + +              ++   L       +
Sbjct: 234 MFRSMPITFVGGLGIGVLAALCT-----KWFTSGPLAGLAGAIPFIVLFAVLIAFPKRKL 288

Query: 333 LMRSH 337
           + R  
Sbjct: 289 VARPQ 293


>gi|221229600|ref|YP_002503016.1| putative transporter protein [Mycobacterium leprae Br4923]
 gi|219932707|emb|CAR70490.1| putative transporter protein [Mycobacterium leprae Br4923]
          Length = 602

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/315 (11%), Positives = 93/315 (29%), Gaps = 33/315 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L  ++            +   +  +  Q ++  +  +G++ V+   G + L+     
Sbjct: 307 FVALIALFVFFTAAAGAKFYAPSNLLVILQQTVVLAIVGYGMTFVI-MAGSVDLSVGSIV 365

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+   +  ++ ++   +  +   +  + +G            +      ++TL M ++ +
Sbjct: 366 ALTGVTAALVAAQNQFAAIVTALLVGLAAGMVNG----IVFAYGKIPSFVSTLGMLQVCR 421

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I                          +             +     M ++L+   F++
Sbjct: 422 GI-----------------------TLMISDSSAKPMPFHGILGAMGAMPWILIVCLFVT 458

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               +  + T      + I  N++            K++ FA+     G+ G   A+   
Sbjct: 459 ILAGILFQFTMFGRWVKAIGGNERVATLAGVPTRGIKVAIFAICGLTAGLGGIVLASRLG 518

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +P      E  ++ ++VI      GG+  LS       I+  +      M      S 
Sbjct: 519 AGTPTAATGFEIDVIAAVVIGGTPLTGGLGRLSGTLIGAIIISMLSNGMVFMGVGNAASQ 578

Query: 310 LKFDCSFNMRHTTLM 324
           +             +
Sbjct: 579 IIKGIMLAAAVFVFL 593


>gi|78223029|ref|YP_384776.1| inner-membrane translocator [Geobacter metallireducens GS-15]
 gi|78194284|gb|ABB32051.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Geobacter metallireducens GS-15]
          Length = 294

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 91/290 (31%), Gaps = 13/290 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ S      IY +   G +I+  + G+++        +G    V   +   L + + +
Sbjct: 9   QYLLSGLSTGAIYALIGVGFAIIHNATGIINFAQGEFVMLGGMFTVFFLTVLNLPLLVSV 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++   S   G+     +++   +   I+ +I++     ++     +  GK         
Sbjct: 69  ILAIAASTIAGVAFERLAIRPMKNASPISLVIITVGGSILIRGIAMLVWGKDTHA----- 123

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + +                   ++      +     L+   T    A R    N
Sbjct: 124 ------LETFSGNEPIQLGEATILPQHLWIFAVTTVVIICSKLYFNYTISGKAMRACAYN 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   +   +    L +FA+SSA   MAG   A      +         +      I+G
Sbjct: 178 SRAAGLVGIDVRRMVLFSFAISSAMGSMAGIIIAPLTM--TSYDVGVMLGLKGFCAAIIG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           GM+S         IL  +  L  G+    +   + F     +       +
Sbjct: 236 GMSSGLGTVFGGVILGILESLGAGIFSSGYKDAIAFIILLIILFIRPHGL 285


>gi|25027559|ref|NP_737613.1| putative ABC transporter permease protein [Corynebacterium
           efficiens YS-314]
 gi|23492841|dbj|BAC17813.1| putative ABC transporter permease protein [Corynebacterium
           efficiens YS-314]
          Length = 328

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 52/331 (15%), Positives = 101/331 (30%), Gaps = 30/331 (9%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           + +       +  ++  +++ Y + A G+ I  G  G+L+L   + + IGAY   +    
Sbjct: 1   MLIAPLVLSTFQLNLMARLVCYAIVAVGIGIAWGRGGMLTLGQGVFFGIGAYVMAMHMLL 60

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF-------------- 133
              ++      + M       +              +A +I+  +               
Sbjct: 61  ADAAMMGQTVPAFMSLAGTSDVPLWWRPFANPVVTVLAVIILPALVAFALGFPIFKRRIK 120

Query: 134 --QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                ++           +            +     FF F        + +Y +  G+ 
Sbjct: 121 GAYFAILNQALAAAVVVLLVGQQGALGGSNGLNGFTSFFGFTLYDPTNRVVLYLMAAGVL 180

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L  +I  WL R+         RD ++    L     + K  A+ +++   G+AGA F  
Sbjct: 181 LLMVAISYWLMRSRYGELLVATRDTEERVRFLGYDPAWIKTGAYVIAAMMAGIAGALFVP 240

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               ISP       +I+ +  V  GG  SL         L  +                 
Sbjct: 241 IMGIISPAEIGVVPSIVFVIAVAAGGRNSLFGPVVGALALGWMESAL------------- 287

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              SF    +      L LVI++    +  L
Sbjct: 288 -AQSFPSAWSYFQGAILVLVIVLLPGGIASL 317


>gi|319784996|ref|YP_004144472.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170884|gb|ADV14422.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 376

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/313 (10%), Positives = 91/313 (29%), Gaps = 10/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +V  ++  +      S     +M   + I+ + A G+ ++V   G + L+     
Sbjct: 30  AFFALIVIIVVFSILSPYYLSVANFLTMASHVAIFGILAIGM-LLVILNGGIDLSVGSTL 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       L     LS   ++    +   A    M    +      +    +   ++  
Sbjct: 89  GLAGVVAGFLMQGVTLSWLGVVLYPPVWVVAVLACMLGAVVGL----INGVLIARFKVPA 144

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +             + +   L +     +  +    F +        +   ++ +  ++
Sbjct: 145 FVATLGVMYMARGLALLMTSGLTYNNLGGKPELGNTGFDALGFNRLFGVPTGVVVLVVIA 204

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L RTA          N++A       +   ++S + +S     +AG   ++   
Sbjct: 205 LIGSIVLNRTAFGRWLYASGGNERAAELSGVPVKTVQISVYVLSGICAAIAGLILSSQLT 264

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG  ++        ++  + +    +    +   
Sbjct: 265 SAGPTAGTTYELTAIAAVVIGGAALTGGRGNIRGTLLGAFVIGFLSDGLVIIGISSYWQT 324

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 325 VFTGAVIVLAVLL 337


>gi|229490563|ref|ZP_04384401.1| inner-membrane translocator [Rhodococcus erythropolis SK121]
 gi|229322383|gb|EEN88166.1| inner-membrane translocator [Rhodococcus erythropolis SK121]
          Length = 752

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 85/292 (29%), Gaps = 8/292 (2%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +     +   +Y + A GL +   + G+ +        +GA+ Y  L   + L  ++ +
Sbjct: 6   TFTILGLVLGSVYAIAASGLVLTYNTSGIFNFAHGAQAMLGAFIYWQLRYGWELPTFVAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +S ++ G        P +      L +  L  +     I++    +    +  +     
Sbjct: 66  LISLVLVG--------PLMGLGLYVLIMKGLRDTAEVTKIVVTVSILLGMLSISHWFWHP 117

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
               T         +               +L    ++  + +   RT    A R + D+
Sbjct: 118 ETARTMQMFFGDQSKITVFGASIRYHELICILVAIAIAVGLRILFTRTRAGVAMRGVVDD 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +               ++A+ S    +AG                    I   +  + G
Sbjct: 178 PELLRLNGHNPERLAALSWAMGSTLAVLAGILITPISGGTLEANMLTLLVIDAFAAAMFG 237

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
            + S+ +      +L              ++    F  S  M    +++I L
Sbjct: 238 RLRSIPRTFVGAVVLGLAGTYVLAYFPTSWSWTSNFRVSLPMIALFVVLIVL 289



 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 105/286 (36%), Gaps = 10/286 (3%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            +     L++ ++L          +     + + + A  L+++ G  G L+L  V   AI
Sbjct: 313 AVVWGVALIVIVYLIRLLMVTSAVTTLTIGMTFAIIALSLTLLTGYAGELNLAPVSFGAI 372

Query: 77  GAYSYVILGSRYG----LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
                   G              I V  +++   G ++ LP+L+ RG YLA+AT+     
Sbjct: 373 ATIVAFHFGISGSGLAAHLNLWGIVVGVLVTAVIGGLVALPALRLRGLYLALATMAFGVF 432

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             N++++            +    Y L       +   +     +  E      +  +  
Sbjct: 433 LSNMVLR------DTTEHEMFGMKYSLFKDGNIALPPLKIGPLDLSNETVFLMTVTALFS 486

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +    ++ LR +        ++D+      L  +++  KLS F +SS   G+ G   +++
Sbjct: 487 ILGVGVIALRNSGYGRRLAAMKDSPAGSAMLGQSLVRLKLSVFMISSGIAGLGGILMSSA 546

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
              +S + F    ++ ++ + ++ G+  ++       +      + 
Sbjct: 547 MGSVSGESFAIMVSLSLLMLTVVAGIGYVTGALFGGLMAGIGFAVI 592


>gi|209515367|ref|ZP_03264233.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209504087|gb|EEA04077.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 289

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 47/302 (15%), Positives = 100/302 (33%), Gaps = 29/302 (9%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +  +   +YV+ A GLSI  G LG+++      +A+GAY        + +  W  +  + 
Sbjct: 11  NGLVLGFVYVLIAVGLSITFGLLGVINFAHGAFFALGAYVAY---QLFQMYGWPAVLFAP 67

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           ++ G  GM++ +  ++       +++LI++     ++        G  G       +  G
Sbjct: 68  ILVGVIGMVVEVTIIRRLYGKEPLSSLIVTFALSLLIEALIRYFWGADGKPFNPPEFLSG 127

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                        +  ++   +   VL        ++  +L  T      R    + +  
Sbjct: 128 I----------VEAGPLLITKYRVAVLFTTVGTLVALAAFLAWTPYGRVLRAGSRDPEMV 177

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             L   +       F +  A   +AG   A             +  +    +V +GG+ S
Sbjct: 178 ELLGINLPRVMTGVFGLGCALAAIAGVLAAPL--WTVSPSMSQNAIMPAFVVVAIGGLGS 235

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
            +    A   +  V+ L          +               M   +F+V+L+R   L 
Sbjct: 236 FAGAVVAGLAVGVVMSLTIQFQADAAAAS--------------MYALMFVVMLLRPRGLF 281

Query: 341 RL 342
             
Sbjct: 282 GE 283


>gi|116249071|ref|YP_764912.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253721|emb|CAK12114.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 290

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 96/303 (31%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +   +Y + A G++++ G L  ++      Y +G +         GLS  + I V 
Sbjct: 10  VNGIVTGSVYAIVAVGMTMIFGVLRAINFAHGEYYMLGTFGAWFAIDYLGLSYEVSIVVG 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + + A   ++G   ++      A + ++ +     IL     +  G             
Sbjct: 70  VLATIAVAYVVGQLVMRRMVGAPAESGVLATLGIALILQNTIILVFG------------G 117

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G    +                    +L+    +   + L +  T +  A R +  N + 
Sbjct: 118 GYKFFAGGYIEPVSILGFSLAEQRILILVVCLLVFIGLELMVSYTRLGMAMRAVSQNVEC 177

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +    L  F + +A   ++G   A     +   M         + I+I+GG+ 
Sbjct: 178 CSVVGIDVPQVVLRTFMLGAALAALSGVLTAPVNVSVYGGM-GELITFKTLPIIIMGGLG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           ++     A  IL     L        F   + F               L L+++ R H L
Sbjct: 237 NVRGTFVAAMILGVAESLVATYVGLQFRDTVGFAT-------------LILMLMWRPHGL 283

Query: 340 LRL 342
              
Sbjct: 284 FST 286


>gi|53723998|ref|YP_104443.1| branched-chain amino acid ABC transporter permease [Burkholderia
           mallei ATCC 23344]
 gi|52427421|gb|AAU48014.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia mallei ATCC 23344]
          Length = 287

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 104/303 (34%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +    Y + + GL+++ G L +++      + +GA    +  +  GL  W ++ +
Sbjct: 8   LLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLNYLGLPYWAMLVL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  G+++    L++      +  L+++     ++        G +G         
Sbjct: 68  APVVVGLFGILIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRAIYGSSGQPYDVPALL 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G T             F+    +  +V++    +  +    + +T +    R   +N K
Sbjct: 128 EGAT----------NVGFMFLPNYRAWVVVASLAVCLATWFVIEKTRLGAYLRAGTENPK 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +    A    AG   A         +      I V ++V++GGM
Sbjct: 178 LVEAFGVNVPMMVTLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMIITVFAVVVIGGM 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L  V  L                  +     T++ + + +V+L+R   
Sbjct: 236 GSILGSIVTGLMLGVVEGLTRVF--------------YPEASATVVFVIMAIVLLIRPAG 281

Query: 339 LLR 341
           L  
Sbjct: 282 LFG 284


>gi|256058882|ref|ZP_05449096.1| hypothetical protein Bneo5_00766 [Brucella neotomae 5K33]
 gi|261322817|ref|ZP_05962014.1| inner-membrane translocator [Brucella neotomae 5K33]
 gi|261298797|gb|EEY02294.1| inner-membrane translocator [Brucella neotomae 5K33]
          Length = 295

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 55/318 (17%), Positives = 115/318 (36%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           +++   +        +    I    Y M + GL+I+ G L +++      Y +GA+   +
Sbjct: 1   MVMIFGIPLQALLGQLLVGLINGSFYAMLSLGLAIIFGLLRIINFAHGAQYMLGAFVGYL 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L S  G+S W  + ++ +I G  G I+   +L    +   +  L+ +     ++      
Sbjct: 61  LLSWLGISYWPALVLAPLIVGLGGAIIERVALSRLYNLDPLYGLLFTFGLALVIEGTFRY 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G AG   A      G               F+    +  +V++   F+   I L + +
Sbjct: 121 YYGAAGQPYAVPPSLAG----------GRNLGFMFLPNYRAWVVVASLFVCLGIWLLIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N     +    +       +A+ SA  G+AG   A         +   
Sbjct: 171 TKLGAYLRAATENPTLVKAFGINVPLLLTFTYALGSALAGLAGIMAAPIYQV--SPLMGS 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  I+V ++V++GGM S+        +L     L                  +    + +
Sbjct: 229 NIIIVVFAVVVVGGMGSILGAIITGYVLGIAEGLTKVF--------------YPEASSIV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           + + + +V+L+R   L  
Sbjct: 275 VFVIMAIVLLVRPAGLFG 292


>gi|260905269|ref|ZP_05913591.1| branched-chain amino acid ABC transporter, permease protein
           [Brevibacterium linens BL2]
          Length = 288

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 91/302 (30%), Gaps = 27/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GL++V G L + +L     Y +GAY      +  G+     I +
Sbjct: 8   LFNGVALGGVYCLAAIGLTLVFGVLRIPNLAHGSLYMLGAYVTYFFLTTVGVPYVAAIGI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+I    G+++         +      +I +               G     +   +  
Sbjct: 68  AALILFVLGVLLERLVFHPLRNSPHTHHMIAAIGAMFFFQAVAQAIWGADFRRMETPISG 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + + I   R         +               +  +++R+        I  ++ 
Sbjct: 128 SLRILGAEISAQRIVIIVTAVVVLS------------LLTWFIKRSIHGQTIEAIEQDRT 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        +    +S+  + +A    +     +       S N+ V +I+ILGG+
Sbjct: 176 GSALVGINPAMVSMLTLGLSALLVTIAAGLVSP--INLLSPTMGDSLNLKVFAIIILGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL      +  L     +            + F             I L  V+ ++   
Sbjct: 234 GSLPGAIVGSFALAIAETMTSTYISSAVGEAVAF-------------IVLVAVLAIKPTG 280

Query: 339 LL 340
           L 
Sbjct: 281 LF 282


>gi|294084348|ref|YP_003551106.1| inner-membrane translocator [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663921|gb|ADE39022.1| inner-membrane translocator [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 437

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 52/274 (18%), Positives = 97/274 (35%), Gaps = 21/274 (7%)

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           + I     V  + +     ++G  SL  R DYLAIATL +SEI    L     +T G   
Sbjct: 161 MPIIFSWLVGGVFAAGAAWVVGKISLGLRSDYLAIATLGISEIIIYFLKFEDWLTRGVKN 220

Query: 150 IYVADRLYFLGTTVRSLIRFFRF---------PSSFVIYEIFMYYVLLGMCFLSASIILW 200
           +    R       + +   F  +          +S ++ ++    +   +  +   +   
Sbjct: 221 VAGLPRPVPYEVDLNNSAGFQDWAESLGVQVDDASSIVVKLCYAILFTAVLLVILWLSET 280

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             R+      R IRDN+ A  ++   + +  L  F + SA +G+AGA       + +P  
Sbjct: 281 ALRSPWGRMMRAIRDNEIAASAMGKNVTWRHLQVFVLGSAVVGVAGAMLTTLDGQFTPTT 340

Query: 261 FKFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK-------- 311
           ++      ++  +VI+GG  +         I+         M  +  ++L          
Sbjct: 341 YQPLRFTFLIWVMVIVGGSGNNWGSILGGFIIWFFWIEAEPMGLWLIDTLTSGMSEDHWL 400

Query: 312 ---FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 S        M + L LV+      L+  
Sbjct: 401 RVHLMNSAAHMRLITMGLVLLLVLRFAPRGLIPE 434



 Score = 37.9 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 40/88 (45%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L +F+G  +S     S+    LI  + A G++I  G  GL ++  +   A+G  + V++ 
Sbjct: 17  LLVFVGFIQSWSVSLSLLNLCLISAIMALGVNIQWGYAGLFNVGIMGFAALGGLAGVLVA 76

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLP 113
           S+     W +  +  +     G+ M + 
Sbjct: 77  SQPVPEAWQVGGLGILGGLIAGLGMIVA 104


>gi|118587840|ref|ZP_01545250.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Stappia aggregata IAM 12614]
 gi|118439462|gb|EAV46093.1| hydrophobic amino acid ABC transporter (HAAT) family, permease
           protein [Stappia aggregata IAM 12614]
          Length = 296

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 96/310 (30%), Gaps = 19/310 (6%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               Y+        IY + A G+S++ G L            +G Y  + + +   ++  
Sbjct: 4   FVNFYLFPALAIGSIYALGAVGISMIFGILRFAHFAHGDLMTLGTYGVLAMAAIVPVNPL 63

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           LLIP    ++    +++     K   +   I T+I S     +      +  G       
Sbjct: 64  LLIPFGMALTIVSALLVDRYFYKPLRELPTIYTVISSFGIALVFRSIVQLVWGSQNQV-- 121

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                      + ++            +     ++    ++  +  +L  T    + R +
Sbjct: 122 ---------FSTGVKPPLVLFDTFRISVLHLQAVISTAIIAVLLHYFLTVTRTGRSMRAV 172

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            D+ +                + + +A   +AG F A +          ++  + + +  
Sbjct: 173 ADDPELAEVSGLDTAKVIRWTWIIGAALAAIAGTFAALNTSA--HPNLGWNLLMPMFAAA 230

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ILGG+           I+    EL        ++ +           T +  + +  +++
Sbjct: 231 ILGGIGKPMGAMAGGFIIGLAEELSS------YHWIGDDALISPSYKTAVAFVLMIGLLI 284

Query: 334 MRSHSLLRLR 343
            R   L + R
Sbjct: 285 FRPQGLFKGR 294


>gi|91976836|ref|YP_569495.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91683292|gb|ABE39594.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 291

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 85/305 (27%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G  IV  + G+++         G ++ V       L        
Sbjct: 8   LVNGLAIGSVYALAAIGFVIVYSATGVVNFAAGQFVMFGTFAGVATLLNAQLPWPFAYSA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I    G +              +  +I +      +     ++ G            
Sbjct: 68  ALLIMALFGALFFCAVYLPLRRGSVVTIIIGTVAISITMQNAALLSFGS----------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + S +          I       V+     + A + L   RT++    R +  + +
Sbjct: 117 WPFRLPSPVEDSAVTLGGAIISTHALGVVGVTAIMVAGLWLLFNRTSVGVGMRAVAQDLQ 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +      ++ +++   G+AG          +         +   +  I+GG 
Sbjct: 177 AAKLMGLKVNRLLALSWVLAAVLAGVAGLMLGP--MWFADVNMGDPIALKAFAATIIGGF 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL         +     L        +  L+ F               + + +L+R   
Sbjct: 235 GSLPGAIVGGLFVGLSEVLGASYVSSAYKDLISFG-------------IMIVFLLVRPQG 281

Query: 339 LLRLR 343
           +   +
Sbjct: 282 VFGEK 286


>gi|158314996|ref|YP_001507504.1| ABC transporter related [Frankia sp. EAN1pec]
 gi|158110401|gb|ABW12598.1| ABC transporter related [Frankia sp. EAN1pec]
          Length = 956

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 96/259 (37%), Gaps = 4/259 (1%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           +   IL Y + A  ++I+ G  G LSL  +    +G  + +      GL + +   V A+
Sbjct: 347 LYTVILGYAICAASITILTGWAGQLSLGQMAFAGLG--ALLAAALNRGLRLQVGGSVMAL 404

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +      + + +         +    +      + +                 ++    
Sbjct: 405 NALPFPAAVAIATAFTAALAAVVGAGALRVRGLLLAVSTFAFGIAAEQYLYRRDVFHDEG 464

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
              +           V  +   YY++L +  L   ++  LRR+ +      +RDN     
Sbjct: 465 GNTASFPRSTVFGIDVTTQRAYYYLVLIVLVLVLLVVARLRRSGVGRTTIGVRDNPATAA 524

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS--ENIIVISIVILGGMT 279
           +        KL AFA++    G+ G+  A +   +      F   +++I++SIV++GG+ 
Sbjct: 525 AYTVAPTRVKLRAFALAGGIAGLGGSLLAGAVQNVPYADRYFLSPDSLILVSIVVIGGLG 584

Query: 280 SLSKIAKATAILIGVVELC 298
           S++     +  +IG+    
Sbjct: 585 SVTGPLLGSLWVIGLPSFF 603



 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 89/263 (33%), Gaps = 9/263 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  L+  + A G+ +V  S  +++        +G+  + +L  RY +  W+ + +
Sbjct: 9   LFDGAVTGLVIGLLAVGIVLVHRSTRVINFAVANMGLVGSALFALLTVRYNVPYWISLAI 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G ++ L  ++       +  L+ +     + +             + D   +
Sbjct: 69  ALLVGVLFGALVDLTVIRRLFAAPRVILLVATIGVAQLALTVV--------TSLPDLDDY 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +          P+S +        VL+ +  ++  + L+L RT +    +   DN +
Sbjct: 121 PSESYPVPWSGSWSPASGLTITGAQLSVLVTVPLVALGLSLFLGRTVLGRTVKAAADNPE 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DMFKFSENIIVISIVILGG 277
                  +      + +AV+     +     +A    ++       +  +  ++  ++  
Sbjct: 181 LARLQGISPKTVSTAVWAVAGLIGTLCLILVSAQNQSLTQITTLGPTTLLRALAAAVIAR 240

Query: 278 MTSLSKIAKATAILIGVVELCCG 300
           MTS      A   L         
Sbjct: 241 MTSFRVALLAGIALGLAQSFIQF 263


>gi|126459065|ref|YP_001055343.1| inner-membrane translocator [Pyrobaculum calidifontis JCM 11548]
 gi|126248786|gb|ABO07877.1| inner-membrane translocator [Pyrobaculum calidifontis JCM 11548]
          Length = 359

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 51/343 (14%), Positives = 108/343 (31%), Gaps = 34/343 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
             +   +I        IY ++   L++ VG LGL     V+  A+GA++   + ++  L 
Sbjct: 2   FLQIDVFIRETVAIAAIYAIYVLSLNLEVGYLGLPQFGKVMFLALGAFAVGGIATKVALL 61

Query: 92  IWLLIPVSAM-------ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
           ++  +  S +       +   C       +   +G +L+     ++     ++I      
Sbjct: 62  LYGGLIQSRLGINPLANLDAYCTAYQYQAADVIKGIFLSNPLEAVAFFLMALIIAAALAG 121

Query: 145 NGKAGIYVAD------------------------RLYFLGTTVRSLIRFFRFPSSFVIYE 180
                +                                L   V   +    F     +  
Sbjct: 122 VFGVVMSWPAIRLREDYLGILLLVSAETIRVITTYTPQLACGVFGAVVPDPFVWMGELRP 181

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
                V++ +  L+  +   L  +    A R IRD + A       I+  ++   AV+SA
Sbjct: 182 WGYALVVVLLLVLTFFVAERLGNSPFGRALRAIRDAETAAAVFGKDIVRFRVRVLAVASA 241

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             G+AGA  A   + ++   F          ++I+GG  +         I          
Sbjct: 242 LSGVAGALLAFYNNFVNMGQFVPLYTFYAWLMLIIGGSGNNVGALVGVGIYYAAD---RL 298

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
           ++ Y        +         +  I + LV++     ++  R
Sbjct: 299 LSLYKEGIRQVVNVDPVFFQYMVFGIVVILVLMFMPQGVVAER 341


>gi|114764862|ref|ZP_01444044.1| inner-membrane translocator [Pelagibaca bermudensis HTCC2601]
 gi|114542748|gb|EAU45771.1| inner-membrane translocator [Roseovarius sp. HTCC2601]
          Length = 306

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 111/318 (34%), Gaps = 15/318 (4%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +      + + +     ++  + A GL+++ G +GL++L     Y IGA++   +    G
Sbjct: 1   MSPILLAEQVLNGLQSGVMLFLMAAGLTLIFGVMGLINLAHGSLYMIGAFAAAAVAGATG 60

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
                L+   A  + A  +I  L   +          L   +    +L  +  I     G
Sbjct: 61  SFALALVAALAAAAAAGALIELLVIRR----------LYARDHLDQVLATFALILILSEG 110

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                  + L   + + +         ++Y ++   ++     ++  +     RT +   
Sbjct: 111 TRWLFGSFPLYLNMPAGLSGTVTLPGGIVYPVYRLALIAVGIAVALGLWWLNARTRLGIR 170

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R   ++++   +L   I       FA+ +A  G+AGA   A +             I+ 
Sbjct: 171 IRAGENDREMIAALGVDISKLYTLVFAIGAALAGLAGALVGAIQSV--QVGMGEPVLILA 228

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVI 326
             ++++GG+ S+        ++     L   +    F        +    +   +  + +
Sbjct: 229 FVVIVIGGIGSIKGALIGALLVGLTDTLGGVLLPELFKLFTDPASAAATGSAFASMAIYV 288

Query: 327 ALFLVILMRSHSLLRLRT 344
            +  V++ R   L   RT
Sbjct: 289 LMAGVLIWRPTGLFGART 306


>gi|306841316|ref|ZP_07474025.1| inner-membrane translocator [Brucella sp. BO2]
 gi|306288619|gb|EFM59955.1| inner-membrane translocator [Brucella sp. BO2]
          Length = 293

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 54/315 (17%), Positives = 111/315 (35%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    I    Y M + GL+I+ G L +++      Y +GA+   +L S
Sbjct: 2   IFGIPLQALLGQLLVGLINGSFYAMLSLGLAIIFGLLRIINFAHGAQYMLGAFVGYLLLS 61

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+S W  + ++ +I G  G I+   +L    +   +  L+ +     ++        G
Sbjct: 62  WLGISYWPALILAPLIVGLGGAIIERVALSRLYNLDPLYGLLFTFGLALVIEGTFRYYYG 121

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            AG   A      G               F+    +  +V++   F+     L + +T +
Sbjct: 122 AAGQPYAVPPSLAG----------GRNLGFMFLPNYRAWVVVASLFVCLGTWLLIEKTKL 171

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N     +    +       +A+ SA  G+AG   A         +   +  
Sbjct: 172 GAYLRAATENPTLVKAFGINVPLLLTFTYALGSALAGLAGIMAAPIYQV--SPLMGSNII 229

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+        +L     L                  +    + ++ +
Sbjct: 230 IVVFAVVVVGGMGSILGAIITGYVLGIAEGLTKVF--------------YPEASSIVVFV 275

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L+R   L  
Sbjct: 276 IMAIVLLVRPAGLFG 290


>gi|302348599|ref|YP_003816237.1| Branched-chain amino acid ABC transporter, permease protein
           [Acidilobus saccharovorans 345-15]
 gi|302329011|gb|ADL19206.1| Branched-chain amino acid ABC transporter, permease protein
           [Acidilobus saccharovorans 345-15]
          Length = 316

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 63/331 (19%), Positives = 116/331 (35%), Gaps = 40/331 (12%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +  K L +LA V  ++      A ++Q +  S    ++IY+M A+G++++ G  G L   
Sbjct: 14  REAKELAILAAVLAVIFLAGPLAYRNQFFFLS----MMIYMMLAFGINMIYGFTGYLPFG 69

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
             + Y +GAY   I            I   A+      ++  LP  + R  Y AIATL  
Sbjct: 70  YTVFYGLGAYGVYIGLVLGLHPALAFIFSIAISMAVAAVL--LPLFRLRSHYFAIATLAA 127

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 ++   +       G                           +      YYV   
Sbjct: 128 LLAVNYLVASSELARWTGGGK--------------------GASLVTIYDPNLTYYVTFV 167

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  +  ++   ++ +    A R IR +          +   +  A+ +S+    +AGA +
Sbjct: 168 LLLVFLAVTSLVKYSRYGLALRAIRGSALTASMDGVNVPLIRGLAWLISALMAAVAGAMY 227

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                   PD+F  + ++ VI+  I GG  +L+     + IL  V +             
Sbjct: 228 GWYVSFFYPDIFSVATDVYVITYAIFGGAGTLTGPILGSIILSSVYQFI----------- 276

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                 +      +  I L L+IL     L+
Sbjct: 277 ---GIYYTEYLNIVFGILLVLLILFMPRGLV 304


>gi|260430191|ref|ZP_05784166.1| inner-membrane translocator [Citreicella sp. SE45]
 gi|260419114|gb|EEX12369.1| inner-membrane translocator [Citreicella sp. SE45]
          Length = 178

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 66/178 (37%), Gaps = 15/178 (8%)

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
            S  R  R     +    F Y +   +  + A + L L  +    A R +  ++ A  ++
Sbjct: 5   TSAARLLRDMGWRLSGGEFWYMICGVVLLVGAWLALNLFDSPSGRAMRALHGSEVAAATV 64

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              +   KL AF +S+ +  +AG+  A     I+PD+  F  ++ ++++ +LGG+ S+  
Sbjct: 65  GVDVPRQKLRAFVISAVYASVAGSLLALQNGYITPDVAGFMHSVEMVTMAVLGGVGSVLG 124

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                AIL  + ++      Y    L                       +     LL 
Sbjct: 125 ATFGAAILTLLPQVLTVFAEYEQLVLGLVMVLVM---------------IFLPQGLLP 167


>gi|259046934|ref|ZP_05737335.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Granulicatella adiacens ATCC 49175]
 gi|259036377|gb|EEW37632.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Granulicatella adiacens ATCC 49175]
          Length = 329

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 94/302 (31%), Gaps = 26/302 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + + +  +  +   +++ LF     + + I  +     +Y M A G+  V+   G + 
Sbjct: 5   LKQREIVSIIFIIGLFVVVGLFNPQFLALENIFQIVNNSAVYAMVALGMCFVL-FTGEID 63

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++      + A     + +       + I    +                         +
Sbjct: 64  VSIGAIVGLTAAITGKMLNGGASIFSVFIVAIVVGMAIG--------------------I 103

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I +       I    +T G  GI    +  +                S         YV 
Sbjct: 104 INALGIVLFKIPSIIMTLGMMGIIRGFQYIYTNGQWLQDFPNEFLNISQETIGGTFGYVF 163

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++  +  + ++T +  +++ + DN      +   +   K  ++ +  +F  + G 
Sbjct: 164 ASALVIAILLYFFTKKTMVGKSFKAVGDNIDGARLIGIPVERIKFLSYIICGSFAAIGGV 223

Query: 248 FFAASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMN 302
            +A+    ++P      E   + + VI      GG  S       + ++  +  +   +N
Sbjct: 224 LYASRIGFVTPTDGTGYEMTAIAACVIGGIALEGGQGSTFGAIIGSILMTSISSILVFLN 283

Query: 303 FY 304
           F 
Sbjct: 284 FP 285


>gi|163742030|ref|ZP_02149419.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161384751|gb|EDQ09131.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
          Length = 333

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 44/337 (13%), Positives = 115/337 (34%), Gaps = 19/337 (5%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           RL  Y  ++ +  +    L+ +   A+     +  + + ++I+ + A GL++V G + ++
Sbjct: 9   RLAPYAPLILVPVLAIAGLIAVQNPASWLTLTVSGLAMGMMIF-LMASGLTLVFGLMDVI 67

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           +       ++GA+  + +    G           +++    ++  + +    G       
Sbjct: 68  NFGHGAFVSVGAFIGISVLLTLGHLTNAPSLGLNLLAILAAVLAAMAATAVMGWAFERVI 127

Query: 127 L--IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           +  +       IL+    +   +  I V      +  T    ++           E +  
Sbjct: 128 VKPVYGNHLSQILVTMGGLIIAEQLIIVLWGPEEIHFTRPEALKG-ALTFGDAAIEKYRL 186

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +     + A++   LRRT I    R    N +   +L   +    +  F   SA  G+
Sbjct: 187 VTVGVGLAVFAAMRFVLRRTKIGLIVRAGVQNGEMVAALGYRLRLVFIGVFIAGSALAGL 246

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            G  +   ++ I+  M      I++  +VI+GG+ S+        ++  +      +   
Sbjct: 247 GGVMWGLYQEVITAHM-GNQAMILIFIVVIIGGLGSVEGCFIGALLVGLLQNYVAFVE-- 303

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                               +  +  +++ R   ++ 
Sbjct: 304 ------------PKLALVSNIALMVAILMWRPMGMIP 328


>gi|33596711|ref|NP_884354.1| putative high-affinity branched-chain amino acid transporter
           membrane protein [Bordetella parapertussis 12822]
 gi|33600477|ref|NP_888037.1| putative high-affinity branched-chain amino acid transporter
           membrane protein [Bordetella bronchiseptica RB50]
 gi|33568076|emb|CAE31989.1| Putative high-affinity branched-chain amino acid transporter
           membrane protein [Bordetella bronchiseptica RB50]
 gi|33573412|emb|CAE37396.1| Putative high-affinity branched-chain amino acid transporter
           membrane protein [Bordetella parapertussis]
          Length = 287

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 50/304 (16%), Positives = 94/304 (30%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A GL++V G L +++L       +GAY    L +  G+  +L +PV
Sbjct: 8   LVNGILLGGLYAVMAQGLALVWGVLNIVNLAHGAFIMLGAYVSWYLYTDLGVDPFLGLPV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A +    G ++    L          TL+++   + +L     +        +      
Sbjct: 68  TAAVLFVLGYVLQRGLLNLVVRAPMFNTLLITFGLEVVLTYLAQLAFSADFRTINPP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        +    V   +           L+  + L+L  + +  A R    N  
Sbjct: 125 --------YAGDSYVLGPVTLPVARLAAFGVALALTLGMWLFLLHSRLGRAIRATAQNLI 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A               F +  A  G AG  +              +      +I I+GG+
Sbjct: 177 AARLYGVEPRHLYAVTFGLGLALAGAAGGLYGTVSQI--NPYIGATLTAKCFAISIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +   +      L  V  L        F  +  F               L LV+ +R   
Sbjct: 235 DNPLGVMVGGLFLGIVESLTTLYVGPTFADVASFG-------------ILVLVLFLRPSG 281

Query: 339 LLRL 342
           LL  
Sbjct: 282 LLGR 285


>gi|294853004|ref|ZP_06793676.1| branched chain amino acid ABC transporter [Brucella sp. NVSL
           07-0026]
 gi|294818659|gb|EFG35659.1| branched chain amino acid ABC transporter [Brucella sp. NVSL
           07-0026]
          Length = 763

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 57/137 (41%)

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            +  +L    + A ++ ++  + +  +W  +R +++A  +   +I  AKLSAFA+S+   
Sbjct: 348 YFLFVLLAYGIIAVVLEFISHSRLGASWLAVRHSERAAAANGISIPRAKLSAFAISAFIS 407

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G++G   A     +  + F   +++ + ++  + G            +++   EL   +N
Sbjct: 408 GISGGLLAGYLGTLVTENFSMMQSLALFAVATMAGAHFTLGALIGGVLIVLFPELLRHLN 467

Query: 303 FYYFNSLLKFDCSFNMR 319
                  + F       
Sbjct: 468 LPQDIGNVFFALGAVQA 484


>gi|148274027|ref|YP_001223588.1| putative sugar ABC transporter permease [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
 gi|147831957|emb|CAN02928.1| putative sugar ABC transporter, permease component [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 348

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 40/318 (12%), Positives = 97/318 (30%), Gaps = 22/318 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLF-LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           L++Y  +   + +V  +++F L          +  +  Q+ +    A   ++++ + G +
Sbjct: 35  LHRYPAVSPAVVLVLAIIVFGLLNDRFLDPANLSLVTQQVAVVGTLAVAQTLIILTAG-I 93

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+      + +       S+ GL     +    ++  A G   GL   + R     +  
Sbjct: 94  DLSVGAVMVLTSMVIAQTASQNGLPAPAALAAGLVVGLAAGAFNGLLVTRLRLPPFIVTL 153

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
             ++      L+     T    G+ +   L + G T         F    ++    +   
Sbjct: 154 GTLNIFVALTLLYSNGAT--VRGVDMPSALSWTGRTFDLAGVKISFGVVLMLVLYVVVAF 211

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +LG             +TA       + D+++A      ++    +S +  + A +    
Sbjct: 212 ILG-------------KTAWGRHVYAVGDDKEAARLAGISVNRVLMSVYLAAGAILAFGA 258

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
                  +  SP+         + ++VI      GG  ++        I+          
Sbjct: 259 WIQIGRSNAASPNAGADLNLDSITAVVIGGTSLFGGRGTVWGTLLGALIVGVFRNGLSLA 318

Query: 302 NFYYFNSLLKFDCSFNMR 319
                   L       + 
Sbjct: 319 GLDVLYQTLAVGVLIIVA 336


>gi|33600471|ref|NP_888031.1| putative high-affinity branched-chain amino acid transporter
           membrane protein [Bordetella bronchiseptica RB50]
 gi|33568070|emb|CAE31983.1| Putative high-affinity branched-chain amino acid transporter
           membrane protein [Bordetella bronchiseptica RB50]
          Length = 295

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 110/303 (36%), Gaps = 28/303 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +    Y M + GL+I+ G L +++      + +GA+   +L +  GLS W+ + V
Sbjct: 18  LLMGLMNGAFYAMLSLGLAIIFGLLNVINFLHGAQFMVGAFIAWMLLAWAGLSYWVALLV 77

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++     + +    L+       +  ++++     ++      + G +G+   +    
Sbjct: 78  APLVVAIGAVFVERLFLRHLYRLDHLYGMLLTFGLMLMVEGLFRKSFGSSGLPYPN---- 133

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +        F+    +  +V+     +  +I L + +T + +  R   +N  
Sbjct: 134 --------VIPGGMNLGFMFLPYYRAWVVAASLLVCLAIWLLIEKTRLGSYLRAATENPD 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +A  +   G+AG   A         +   +  I+V ++V++GGM
Sbjct: 186 MVRAFGIKVPVLLTLTYAFGAGLAGLAGVMAAPIYQV--SPLMGSNLVILVFAVVVIGGM 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L  +  L                  +     T++ + + +V+L++   
Sbjct: 244 GSILGSILTGFSLGAIEGLTKLF--------------YPQASATVIFLVMIIVLLIKPTG 289

Query: 339 LLR 341
           L  
Sbjct: 290 LFG 292


>gi|17988686|ref|NP_541319.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Brucella melitensis bv. 1 str. 16M]
 gi|62317219|ref|YP_223072.1| branched-chain amino acid ABC transporter permease [Brucella
           abortus bv. 1 str. 9-941]
 gi|83269201|ref|YP_418492.1| inner-membrane translocator [Brucella melitensis biovar Abortus
           2308]
 gi|189022482|ref|YP_001932223.1| Bacterial inner-membrane translocator [Brucella abortus S19]
 gi|225629411|ref|ZP_03787444.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Brucella ceti str. Cudo]
 gi|225686716|ref|YP_002734688.1| hypothetical protein BMEA_B0942 [Brucella melitensis ATCC 23457]
 gi|237816780|ref|ZP_04595772.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Brucella abortus str. 2308 A]
 gi|254690725|ref|ZP_05153979.1| hypothetical protein Babob68_11311 [Brucella abortus bv. 6 str.
           870]
 gi|254695970|ref|ZP_05157798.1| hypothetical protein Babob3T_15357 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254698502|ref|ZP_05160330.1| hypothetical protein Babob28_12587 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254700156|ref|ZP_05161984.1| hypothetical protein Bsuib55_04761 [Brucella suis bv. 5 str. 513]
 gi|254705581|ref|ZP_05167409.1| hypothetical protein BpinM_00786 [Brucella pinnipedialis
           M163/99/10]
 gi|254710815|ref|ZP_05172626.1| hypothetical protein BpinB_11201 [Brucella pinnipedialis B2/94]
 gi|254731950|ref|ZP_05190528.1| hypothetical protein Babob42_12392 [Brucella abortus bv. 4 str.
           292]
 gi|256015717|ref|YP_003105726.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella microti CCM 4915]
 gi|256029197|ref|ZP_05442811.1| hypothetical protein BpinM2_00765 [Brucella pinnipedialis
           M292/94/1]
 gi|256043826|ref|ZP_05446747.1| hypothetical protein Bmelb1R_04991 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256157390|ref|ZP_05455308.1| hypothetical protein BcetM4_00801 [Brucella ceti M490/95/1]
 gi|256253631|ref|ZP_05459167.1| hypothetical protein BcetB_04934 [Brucella ceti B1/94]
 gi|256262150|ref|ZP_05464682.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2
           str. 63/9]
 gi|260167711|ref|ZP_05754522.1| hypothetical protein BruF5_04904 [Brucella sp. F5/99]
 gi|260544456|ref|ZP_05820277.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038]
 gi|260565006|ref|ZP_05835491.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1
           str. 16M]
 gi|260756297|ref|ZP_05868645.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870]
 gi|260759724|ref|ZP_05872072.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292]
 gi|260762964|ref|ZP_05875296.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882120|ref|ZP_05893734.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68]
 gi|261216400|ref|ZP_05930681.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya]
 gi|261220768|ref|ZP_05935049.1| inner-membrane translocator [Brucella ceti B1/94]
 gi|261312985|ref|ZP_05952182.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10]
 gi|261318381|ref|ZP_05957578.1| inner-membrane translocator [Brucella pinnipedialis B2/94]
 gi|261750649|ref|ZP_05994358.1| inner-membrane translocator [Brucella suis bv. 5 str. 513]
 gi|261757148|ref|ZP_06000857.1| bacterial inner-membrane translocator [Brucella sp. F5/99]
 gi|265986181|ref|ZP_06098738.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1]
 gi|265990250|ref|ZP_06102807.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1]
 gi|265995876|ref|ZP_06108433.1| inner-membrane translocator [Brucella ceti M490/95/1]
 gi|294853911|ref|ZP_06794583.1| branched-chain amino acid transport system permease [Brucella sp.
           NVSL 07-0026]
 gi|297249268|ref|ZP_06932969.1| branched-chain amino acid transport system permease [Brucella
           abortus bv. 5 str. B3196]
 gi|17984494|gb|AAL53583.1| high-affinity branched-chain amino acid transport system permease
           protein livh [Brucella melitensis bv. 1 str. 16M]
 gi|62197412|gb|AAX75711.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|82939475|emb|CAJ12445.1| Bacterial inner-membrane translocator [Brucella melitensis biovar
           Abortus 2308]
 gi|189021056|gb|ACD73777.1| Bacterial inner-membrane translocator [Brucella abortus S19]
 gi|225615907|gb|EEH12956.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Brucella ceti str. Cudo]
 gi|225642821|gb|ACO02734.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
 gi|237787593|gb|EEP61809.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Brucella abortus str. 2308 A]
 gi|255998377|gb|ACU50064.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella microti CCM 4915]
 gi|260097727|gb|EEW81601.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038]
 gi|260152649|gb|EEW87742.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1
           str. 16M]
 gi|260670042|gb|EEX56982.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292]
 gi|260673385|gb|EEX60206.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676405|gb|EEX63226.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870]
 gi|260871648|gb|EEX78717.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68]
 gi|260918007|gb|EEX84868.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya]
 gi|260919352|gb|EEX86005.1| inner-membrane translocator [Brucella ceti B1/94]
 gi|261297604|gb|EEY01101.1| inner-membrane translocator [Brucella pinnipedialis B2/94]
 gi|261302011|gb|EEY05508.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10]
 gi|261737132|gb|EEY25128.1| bacterial inner-membrane translocator [Brucella sp. F5/99]
 gi|261740402|gb|EEY28328.1| inner-membrane translocator [Brucella suis bv. 5 str. 513]
 gi|262550173|gb|EEZ06334.1| inner-membrane translocator [Brucella ceti M490/95/1]
 gi|263000919|gb|EEZ13609.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1]
 gi|263091851|gb|EEZ16173.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2
           str. 63/9]
 gi|264658378|gb|EEZ28639.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1]
 gi|294819566|gb|EFG36566.1| branched-chain amino acid transport system permease [Brucella sp.
           NVSL 07-0026]
 gi|297173137|gb|EFH32501.1| branched-chain amino acid transport system permease [Brucella
           abortus bv. 5 str. B3196]
 gi|326411115|gb|ADZ68179.1| Bacterial inner-membrane translocator [Brucella melitensis M28]
          Length = 295

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 54/318 (16%), Positives = 114/318 (35%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           +++   +        +    I    Y M + GL+I+ G L +++      Y +GA+   +
Sbjct: 1   MVMIFGIPLQALLGQLLVGLINGSFYAMLSLGLAIIFGLLRIINFAHGAQYMLGAFVGYL 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L S  G+S W  + ++ +I G  G I+   +L    +   +  L+ +     ++      
Sbjct: 61  LLSWLGISYWPALVLAPLIVGLGGAIIERVALSRLYNLDPLYGLLFTFGLALVIEGTFRY 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G AG   A      G               F+    +  +V++   F+     L + +
Sbjct: 121 YYGAAGQPYAVPPSLAG----------GRNLGFMFLPNYRAWVVVASLFVCLGTWLLIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N     +    +       +A+ SA  G+AG   A         +   
Sbjct: 171 TKLGAYLRAATENPTLVKAFGINVPLLLTFTYALGSALAGLAGIMAAPIYQV--SPLMGS 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  I+V ++V++GGM S+        +L     L                  +    + +
Sbjct: 229 NIIIVVFAVVVVGGMGSILGAIITGYVLGIAEGLTKVF--------------YPEASSIV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           + + + +V+L+R   L  
Sbjct: 275 VFVIMAIVLLVRPAGLFG 292


>gi|226311262|ref|YP_002771156.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599]
 gi|226094210|dbj|BAH42652.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599]
          Length = 288

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 99/305 (32%), Gaps = 23/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G +++ G LG++++     +  G+   ++L +   + + + + V
Sbjct: 6   LVNGLTVGSTYSLIALGYTLIFGVLGIINMAHGQIFIFGSLVGLVLMTSLNMPLGVALIV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +IS   G+++   +L+            +       ++  + +         A    F
Sbjct: 66  AIVISAILGLVLEYIALRPLRKKNVPHLASLISTIGFAILMEEAMHKFFGADSRAFPQSF 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             TT              V        +L     L   +  W+++T +  A R   +N  
Sbjct: 126 GDTTFD---------LGLVQIRSVDLVILGISVLLMFVLHFWIQKTKMGKAIRATAENTD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L        +    ++SA  G+AG     +   + P M   +     ++++ILGG+
Sbjct: 177 TANILGINTNMVIVVTVMLASALGGIAGILIGMAYSALIPTM-GMTLGFKGLAVLILGGV 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L  +           +   + F     +                +   
Sbjct: 236 GSIPGAMVCGVLLGIIEVFTVAYGDSSYRDAVAFGLIILILLL-------------KPEG 282

Query: 339 LLRLR 343
           L   +
Sbjct: 283 LFGRK 287


>gi|212550588|ref|YP_002308905.1| urea/branched-chain amino acid ABC transporter permease [Candidatus
           Azobacteroides pseudotrichonymphae genomovar. CFP2]
 gi|212548826|dbj|BAG83494.1| ABC-type urea/branched-chain amino acid transporter permease
           component UrtC [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 351

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/307 (9%), Positives = 90/307 (29%), Gaps = 15/307 (4%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS-----RYGLSI 92
              ++  +   + + + G+ ++ G  G++++     + +GAY   +  +        L  
Sbjct: 30  NTLTLWGRYCCFAIASIGIDLIWGYTGIMTMCHAFFFCLGAYGMGMYMTVINLPHGQLVP 89

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
             +      +  A                L  +       +     + K +        +
Sbjct: 90  DFMSWNQVNVLPAFWFPFQTFLGALFCGLLVTSIFAFLFSYFIFRRRIKGVFFAIITQAL 149

Query: 153 ADRLYFLGTT----------VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           A  ++   +           +        F       +  +Y + + +  L   +   + 
Sbjct: 150 ALAMHLFFSRNETMLGGSNGLTHFRYILDFDLYSDSVKRGLYIITVLVLALIFLLSKKIV 209

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            +        IRD++     +   ++  + + F + +    +AG  +      I+P    
Sbjct: 210 ISKFGKILVGIRDSESRLRFIGYKVVQYQTTVFVMGAIMAAIAGMLYLPQTGIITPGRMD 269

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
              +I ++  V  GG  SL         +  +      +    +  +L       + +  
Sbjct: 270 VKASIEMLIWVAFGGRGSLKGAVVGALAVNCIYSFFTSLMPEMWPYILGVLYLITVLYMK 329

Query: 323 LMVIALF 329
             ++ L 
Sbjct: 330 NGIVGLM 336


>gi|167855952|ref|ZP_02478700.1| hypothetical protein HPS_08210 [Haemophilus parasuis 29755]
 gi|167852946|gb|EDS24212.1| hypothetical protein HPS_08210 [Haemophilus parasuis 29755]
          Length = 332

 Score = 65.7 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 104/310 (33%), Gaps = 11/310 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                ++  +   +      +   I ++G+Q     +   G + V+   G + L+     
Sbjct: 14  ALAGLILLVIFFSVTNDYFFTSNNIMTVGLQTSTIALIGIGATCVI-LTGGIDLSTGSVV 72

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+   +  ++ +       + + +  ++ GACG+  G+   + +      ATL M  + +
Sbjct: 73  ALSGVAAAMIVNAGVPVP-IGMVLGILVGGACGLTNGILVTQMKLPPFI-ATLGMMMVAR 130

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    +TN      + +    LG      I          +    + Y ++ M F++
Sbjct: 131 GLAL---YVTNAAPVSGMPESFAVLGNGALFKIVEEGPNGLPKVVFTGIPYPVIIMIFIT 187

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L +  +      I  N++A           K+ A+  S    G+ G   A+   
Sbjct: 188 VLFTFALTKLKVGRYIYAIGSNEEAARLSGIKTNIVKIYAYVASGLLSGLTGVILASRLV 247

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E   + S V+     +GG+ ++      + I+  +           F  +
Sbjct: 248 TAQPNGGVTYELDAIASAVVGGTSLMGGVGTIPGTLIGSFIIGVLRNGLNMNGVSSFVQM 307

Query: 310 LKFDCSFNMR 319
           +       + 
Sbjct: 308 IVIGLVIIVA 317


>gi|187477483|ref|YP_785507.1| ABC transporter permease [Bordetella avium 197N]
 gi|115422069|emb|CAJ48592.1| ABC transporter, permease protein [Bordetella avium 197N]
          Length = 285

 Score = 65.7 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 94/303 (31%), Gaps = 28/303 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   +Y + A G ++V G L +++      Y +GAY+  I            +  
Sbjct: 8   VIIALMSAFVYALVALGFTLVFGILRVVNFAHGEFYMLGAYAMFIFYGTLSWPYLPALAT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+  G  G+++     +          ++   +   +                   ++ 
Sbjct: 68  AALAVGVLGLLVERGLFRRFTGDEMGGMIMSLALAITL-------------QAAISLVFS 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +            +      +      ++       A+    + RT +    R +  +++
Sbjct: 115 VDEQSVRRPVEGAWQIGPAFFAKDQLLIVGVSVIALAAFYFLIERTRLGITIRAVAQDRE 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                  +        FA+S    G++GA  A             +  +    IV+LGG+
Sbjct: 175 VARLQGVSSRKIMAFTFALSCGLAGLSGALMAPVYTI--HPYMGETVVVKAFIIVVLGGL 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL     A+ IL     +          +++ F             + +  V++++   
Sbjct: 233 GSLPGAVVASLILSFTEAIAATFYNATVATMVSF-------------LIVMAVLVVKPSG 279

Query: 339 LLR 341
           L+ 
Sbjct: 280 LMG 282


>gi|84500965|ref|ZP_00999200.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
 gi|84391032|gb|EAQ03450.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
          Length = 425

 Score = 65.7 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 92/269 (34%), Gaps = 16/269 (5%)

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + +  P+  +++     ++G  +L  R DYLAIATL ++EI   ++     +  G   +
Sbjct: 157 PVLMAWPLGGVLAAGAAWLIGKTALGLRSDYLAIATLGIAEIILAVMKNEDWLARGVKNV 216

Query: 151 YVADRLYFLGTTVRSLIRF-----FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                       ++    F         +S V  ++    +   +  +   ++    R+ 
Sbjct: 217 IGIPSPLPSAIELQESAGFAAQFADPVTASTVTVKLGYALLFAAVLIVLLILMQLALRSP 276

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-ISPDMFKFS 264
                R IRDN+ A  ++   +    L  F + SA  G+AGA       + +        
Sbjct: 277 WGRMVRAIRDNEVAAEAMGKDVTRRHLQIFVLGSAICGLAGAMMTTLDGQLVPSTYQPLR 336

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK----------FDC 314
              ++  +VI+GG  +         ++  +      +  +    L               
Sbjct: 337 FTFLIWVMVIVGGSGNNFGAVLGGMLIWFLWVQVEPVGQWLVGLLTSGLPEGAFRDHLLN 396

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLR 343
           S        M + + +V+      L+  R
Sbjct: 397 SAAYMRLFTMGVLMLVVLRFSPRGLIPER 425



 Score = 42.5 bits (98), Expect = 0.098,   Method: Composition-based stats.
 Identities = 19/169 (11%), Positives = 49/169 (28%), Gaps = 1/169 (0%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
                 +L +  G  +S      +    LI  + A G+++  G  GL ++  +   A+G 
Sbjct: 8   LFALVAVLLVVTGMVQSWNLALQVLNMGLISAIMALGVNLQWGFAGLFNVGVMGFVALGG 67

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMG-LPSLKFRGDYLAIATLIMSEIFQNIL 137
            +  +         W       + +    ++        +R        L+ + +    +
Sbjct: 68  LAVALTAMPPVAEAWQAGGTGIVAAMITALVTIAAAVQVWRRRLPRRGWLVAAILVAGFM 127

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           +        +  I   +           L     +P   V+     + +
Sbjct: 128 LYRYFFDPARDAIEDVNPALQGNLGGLGLPVLMAWPLGGVLAAGAAWLI 176


>gi|213691026|ref|YP_002321612.1| inner-membrane translocator [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|213522487|gb|ACJ51234.1| inner-membrane translocator [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|320457080|dbj|BAJ67701.1| ABC transporter permease component [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 294

 Score = 65.7 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 36/289 (12%), Positives = 85/289 (29%), Gaps = 27/289 (9%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL--LIPVSAMISGACGMIMGLPSLK 116
             G +G+++         GAY+  ++ + +        L  V+  +      ++    L 
Sbjct: 28  TFGQMGVINNAHGEFMMAGAYTAYVMSTVFASKTLALGLALVAGFVVAGLLGLLLDVLLL 87

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
            R     + TL+++     +L +      G  G+Y                         
Sbjct: 88  SRMRTRPLDTLLVTFGVSLVLQQVARDIFGSTGVYAQAP----------EALTEPVTLFG 137

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
             +     ++ +      A++   L+ T +    R   +N+        +        F 
Sbjct: 138 YDFPASRLFIFVVSVVCVAALYAVLKFTPLGRRIRATAENRDLAEVSGISTATVDHLTFF 197

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           + S   G+AG   +          F  S  +    +V+ GG+  L     A+  L     
Sbjct: 198 IGSGIAGIAGVALSLLNSI--SYNFGTSFIVQAFLVVVAGGVGQLKGAVIASFALGLCQS 255

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                             + +      + + + + +  R   L+ +R+ 
Sbjct: 256 AIE-------------LPTSSSIAQMSIFLIVVIFLQFRPQGLVAVRSR 291


>gi|121604808|ref|YP_982137.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120593777|gb|ABM37216.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 287

 Score = 65.7 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 95/302 (31%), Gaps = 26/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M A GL+++ G +G+++L     Y +GAY              L    
Sbjct: 10  LLNSVQYGLLLFMLAAGLTLIFGIMGVVNLAHGSFYMLGAYLA----------WSLSALF 59

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            ++     G            ++L        +    +L+ +  I   +    +      
Sbjct: 60  GSLSLAIIGGAALSVLFGLALEWLLFRHFYERDHLDQVLLTFGLIYIFEELRSILWGDDV 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  +  L+      +  + Y ++  ++      L+A +   + +T +    R    N+ 
Sbjct: 120 HGVPIPELLSASIPLTDNLSYPVYRLFMSGVCLALAAGLYFLISKTRLGMKIRAGAFNRD 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+      +AG   A                I+   +V++GG+
Sbjct: 180 MAEALGVNIKLIHAVVFALGVGLAAVAGMVAAPVASV--YPNMGSQVLIMCFVVVVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++  V      +                     L+ I +  V+L +   
Sbjct: 238 GSVRGALIAALLVGLVDTFGKVLLPQVAG--------------MLVYILMAAVLLYKPEG 283

Query: 339 LL 340
           L 
Sbjct: 284 LF 285


>gi|225386996|ref|ZP_03756760.1| hypothetical protein CLOSTASPAR_00746 [Clostridium asparagiforme
           DSM 15981]
 gi|225047008|gb|EEG57254.1| hypothetical protein CLOSTASPAR_00746 [Clostridium asparagiforme
           DSM 15981]
          Length = 290

 Score = 65.7 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 82/303 (27%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V       +        +GA+  +    R  ++++  I V
Sbjct: 6   LITGVSIGSVYALLAVGYALVFSVFNFSNFGFGPVMMLGAFGALFAIERTHMALFPGILV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  ++    ++M +   +              +  +  L+      N     +       
Sbjct: 66  ALAVAAVISLLMEVTIYRPMRQ---------KKALKVYLMIAALGINTCVPNFCIQLWGG 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S           +          +    +   +  +L +T      R    +  
Sbjct: 117 AVRPFPSDWAKAVIRIGNIAIPRADILAAVLSVIMLILLWCFLYKTKTGLGIRASAFDSN 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F +S A  G+AG F+       S                 +GG+
Sbjct: 177 TAGLMGINVNRVAAVVFLLSGATAGLAGCFYGMKY---SVYPNMGVVATKGFVSATVGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL     +  +L  +  +                         +    L +V++ + + 
Sbjct: 234 GSLPGAVISGLLLGFLETIISAYVS-------------TTYRDLVAYGLLVIVLIFKPNG 280

Query: 339 LLR 341
           LL 
Sbjct: 281 LLG 283


>gi|84686544|ref|ZP_01014437.1| branched-chain amino acid ABC transporter, permease protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84665457|gb|EAQ11934.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 288

 Score = 65.7 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 87/305 (28%), Gaps = 22/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I    Y + A GL++  G   +++L       IGA++   L +   +S  L I +
Sbjct: 4   LITGLILGGTYALIALGLNLQYGVSRIMNLANGEMLVIGAFAAFTLFTVGQVSPLLTIFL 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A ++     ++    L+          ++  +                  +       F
Sbjct: 64  VAPLAYVLNWLIYRIMLRPLVKRAKNRGMLEVDAILTTF-------GLSFVMVGLMIWAF 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                  Y +      +    L A++ LWL  +    A R +  + +
Sbjct: 117 GGDYFSYSYLARPITVFGDNYGLNRVVAFVCAAILCAALFLWLNVSRAGMAIRAVAVSPE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +      AFA+  A   + GA  +                +  + IVI+GG+
Sbjct: 177 NARLVGIDVPKLSARAFALGGAVTAVGGAVISTFLTL--DASTGVMFTMKALIIVIMGGV 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +     A  +L         +                            L++L R   
Sbjct: 235 GDVRGTILAALVLGVGETFVASVIDPGLT-------------LVAAYALFILILLFRPQG 281

Query: 339 LLRLR 343
               +
Sbjct: 282 FFGRK 286


>gi|293602475|ref|ZP_06684921.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292819237|gb|EFF78272.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 292

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 103/304 (33%), Gaps = 24/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I S      +Y + A G  +     G ++     +  +GA          G  +   + +
Sbjct: 7   IVSGLGLGSMYGLMALGFYLTYAVSGTVNFAQGSSMMLGAVLTYTFAQTLGWPLAPALLL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  G+++   +++      + A L+ +     +L      T GK    +   L  
Sbjct: 67  ALVLCGVYGLVVERLAVRPFASRGSNAWLMSTVALGIVLDNVVMFTFGKEPRSLPSPLAQ 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +             +        + L    L+A++    RRT    A   +  N  
Sbjct: 127 APLEIGG---------LGLGIYPLQLLIPLVGLALAAALHTLSRRTRWGVALLAVVQNPN 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +  A ++AFAVS+ F G+AGA  A   +            +    + ILGG+
Sbjct: 178 AARLMGIPVRHAIMAAFAVSTLFAGVAGALVAPLFNV--QADMGTLFGLKAYVVAILGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS   +  A  +   V  L        +  ++ F               + +++ +R + 
Sbjct: 236 TSAWGVMIAGLLFGVVEALITVALGSGYTQIISFT-------------LVIVMLAVRPNG 282

Query: 339 LLRL 342
           L   
Sbjct: 283 LFGR 286


>gi|27381346|ref|NP_772875.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354513|dbj|BAC51500.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 293

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/309 (16%), Positives = 105/309 (33%), Gaps = 27/309 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      + V+ A GL+IV G LG+++      + IGAY+  +  +    S W  + +
Sbjct: 12  LLSGIALGAVLVITALGLTIVFGMLGVVNFAHGALFMIGAYA-GLYLASLTGSFWWGLLL 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ GA GM++    ++          L+++     IL++   I  G  GI        
Sbjct: 71  APILIGAFGMLIEFVLIRRLYGRSVDDPLLLTFGLSYILVEGVRIVFGSDGIPFPTPPQL 130

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G                  +  +  +V+  +  +   + L L ++ I    R    +  
Sbjct: 131 VGV----------LDLGIGFFPRYRLFVIALVAVVLLVLWLTLEKSRIGLIVRAGARDPT 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   I    L+ F +      + G      R                  + ++GG+
Sbjct: 181 IMQVLGVDIGRVWLAIFGLGVGLAALGGVLAGPMRSV--NPEMGSLVLAEAFVVTVIGGL 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++   + +                       T +M   + +V+L+R   
Sbjct: 239 GSIVGAVVAGLMVGISISMVALFA--------------PEMATIVMFALMAVVLLIRPQG 284

Query: 339 LLRLRTPSN 347
           L  +R  + 
Sbjct: 285 LFGVRGRTA 293


>gi|13476300|ref|NP_107870.1| sugar ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
 gi|14027061|dbj|BAB54015.1| sugar ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
          Length = 353

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 91/314 (28%), Gaps = 19/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +   +      G   S   +  +  QI I  +     ++V+ + G + L+  +  
Sbjct: 44  LIVLVLSIIIFGITIGGRFFSSYTLTLILQQIAIVGILGAAQTLVILTAG-IDLSIGVIM 102

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I A         YGL   + + +      ACG++ GL     +                
Sbjct: 103 VISAVIMGNCAVSYGLPSVVAVALGLATGAACGLLNGLLVAYMKLPPFI----------- 151

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    I      IY A+                 F  SF +    +   ++ M  L 
Sbjct: 152 -VTLGTWNIVMATNFIYSANETIRDTDVDTQAPLLHLFALSFKVGTAVLTLGVIAMVALV 210

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L  TA       + D+Q+A            ++ + ++      A         
Sbjct: 211 LLLWYVLNHTAWGRHVYAVGDDQEAAKLSGIQTKKVLVTVYTLAGLIAAFAAWVSIGRNG 270

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            ISP       N+  I+  ++GG+       S+        I+  V      +       
Sbjct: 271 SISPSAAVTDYNLQAITATVIGGISLFGGRGSILGTLFGAMIVGVVSMGLNMLGADPQWK 330

Query: 309 LLKFDCSFNMRHTT 322
           +L            
Sbjct: 331 VLLTGVLIIGAVAV 344


>gi|289644355|ref|ZP_06476438.1| inner-membrane translocator [Frankia symbiont of Datisca glomerata]
 gi|289505830|gb|EFD26846.1| inner-membrane translocator [Frankia symbiont of Datisca glomerata]
          Length = 652

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 61/320 (19%), Positives = 111/320 (34%), Gaps = 19/320 (5%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L+    +              + L   +      ++ G  G  SL  +    +  + 
Sbjct: 332 LAILVPAGMIALLVLSGPYRLGLERSLAAAVVCLSFVVLTGFAGQFSLAQMSLAGVAGFL 391

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
              L    G+   L   ++   + A G+++G  S + RG  LAI TL     FQ I+   
Sbjct: 392 LARLQGGLGVPFPLAPLLATAAATAAGLVLGALSRRIRGVDLAIVTLTAGVAFQEIVFVN 451

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             IT G AG  V     F      +   F R              + L +  L    +  
Sbjct: 452 PLITGGLAGSVVPPPKLFGLDLGVAGKGFPRLEYG---------LLCLAVFALCGFAVAR 502

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           LR +        +R N++A  ++       KL A AVS+   G+ G      + R+S D 
Sbjct: 503 LRASTSGLRMLAVRSNERAASAVGVDAARTKLLASAVSAGIAGLGGCLIGYGQGRLSFDS 562

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F    ++  ++I  +GG+ S+        +                 ++L          
Sbjct: 563 FGVFASLFFLAIASVGGVMSVRGAMLGGLL----------APGGVVFTVLDNFGHLARYQ 612

Query: 321 TTLMVIALFLVILMRSHSLL 340
           + L  +AL +++++R   L 
Sbjct: 613 SLLCGVALAVLVVVRPEGLA 632



 Score = 40.2 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 30/303 (9%), Positives = 85/303 (28%), Gaps = 14/303 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y     GL ++  + G++++          Y Y  L     + + ++   
Sbjct: 8   LILGLGAGAVYAALGLGLVLIHRASGVVNVAHAAFAMYATYQYAELRDVGDIVLPVVGLP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV------ 152
             +            ++      L    +                     G+ +      
Sbjct: 68  PRIHLTNSPTFALALTVSLAMTALLGLLVYFLIFRPLRHAPPALSLVASVGLMIALQALA 127

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
             +       + S++    F +  V   +    + + +  +   +    R T    A + 
Sbjct: 128 VLQFGSDNRFIDSVLPQKSFSAFGVTVPVDRPLLAILVTGIGMIMWAVSRWTLFGLATKA 187

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           + ++ +A              ++ V+S    +AG   A     +          +  ++ 
Sbjct: 188 VAESDEAVEQFGYRPEAVAAVSWVVASVLGALAGILVAP--ISVLSPSTYTLFIVPALAA 245

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            +LGG++S         +L  +  +   +             +     T   ++ L +V 
Sbjct: 246 ALLGGLSSFGATIVGALLLGMLQSVLLPLQHDV------PWLNQPGLRTLFPLLVLIVVA 299

Query: 333 LMR 335
           + R
Sbjct: 300 VTR 302


>gi|167838444|ref|ZP_02465303.1| inner-membrane translocator [Burkholderia thailandensis MSMB43]
          Length = 294

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/318 (12%), Positives = 105/318 (33%), Gaps = 26/318 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +  +     +    +    Y + + GL+++ G L +++      + +GA    +  +
Sbjct: 3   IFGIPMSAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLT 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL  W ++ ++ ++ G  G+++    L++      +  L+++     ++        G
Sbjct: 63  YLGLPYWAMLVLAPVVVGLFGILIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRAIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G                 +        F+    +  +V++    +  +    + +T +
Sbjct: 123 SSGQPYDVP----------ELLAGATNVGFMFLPNYRAWVVVASLAVCLATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMVTLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  +  L                  +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSIVTGLMLGVIEGLTRVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLRLRT 344
            + +V+L+R   L     
Sbjct: 277 IMAVVLLIRPAGLFGKER 294


>gi|111224421|ref|YP_715215.1| putative high-affinity branched-chain amino acid transport system
           permease [Frankia alni ACN14a]
 gi|111151953|emb|CAJ63675.1| putative High-affinity branched-chain amino acid transport system
           permease protein; putative membrane protein [Frankia
           alni ACN14a]
          Length = 655

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 57/254 (22%), Positives = 100/254 (39%), Gaps = 12/254 (4%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
                S     L+ +  A  + IV G +G  SL  +    IG            +     
Sbjct: 321 NGTYQSGLTTSLVTISVALSVVIVTGFVGQTSLMPMTFAGIGGLLTSKFAEDLNVPFPFP 380

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + ++A+     GM++GLP+L+ RG  LA+ T+  +     +L   +  T G+ G      
Sbjct: 381 LVLAAVCMVPIGMVLGLPALRVRGLNLAVVTIGAAVAVNAVLFLNRSWTGGQTGSLAPSP 440

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                         F F     ++        + +  L       LRR         +R 
Sbjct: 441 ------------SIFGFSLDPSLHRFRFGLFCVLLTALLVWGTGNLRRGPSGLRMLAVRS 488

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N++A  +   ++  AKL AFAVS+A  G++G+  +     +S D F    +I +I +V +
Sbjct: 489 NERAATASGISVSSAKLQAFAVSAAVAGVSGSLLSYQIGAVSFDRFDVFGSIGLIVLVYI 548

Query: 276 GGMTSLSKIAKATA 289
           GG++ +S    A  
Sbjct: 549 GGVSVVSGAIFAGL 562



 Score = 44.5 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 79/255 (30%), Gaps = 14/255 (5%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           +          Y + A G+ +V    G LS          A+ +  L  +      + + 
Sbjct: 7   FAILGLGSGAAYAILACGVVLVHRGSGTLSFAQGAVCMFAAFFFARLVEQGVPKP-VALV 65

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           V+ + +GA G +     ++       +A +I++      L     +  G         L 
Sbjct: 66  VTLLAAGAFGAVWHAAVMRPLRSAPILAKVIVTLGLLTALEGAASLWFGDQIRNAPKVLP 125

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                V  +                  ++L     ++ ++  W   T I  + R   +N 
Sbjct: 126 TGDVGVFGIQFGQD-----------RLWLLGITIVIAIALAAWYSATLIGVSTRAAAENP 174

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +    L  +      + +A+  A  G+AG   A                +  ++  +LGG
Sbjct: 175 RGAALLGFSPDLIAATNWAIGCALAGLAGILIAPIVGL--SIGGLTLLILPALAAALLGG 232

Query: 278 MTSLSKIAKATAILI 292
             S    A A  ++ 
Sbjct: 233 FRSFGLTALAGILIG 247


>gi|116751483|ref|YP_848170.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
 gi|116700547|gb|ABK19735.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
          Length = 295

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 85/305 (27%), Gaps = 26/305 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y  S     +IY M A G +I+     +++        +G            L I +  
Sbjct: 7   QYTISGLTIGVIYAMVALGYNIIYNVTEIINFAQGEFVMLGGLFAAFFIGVLRLPIVVGF 66

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + + +G  G++M    ++   +   ++ +I++     +L     I  GK    V    
Sbjct: 67  FGAVLATGLVGLVMERFVIRRAKNASVLSLIIITIALSILLKGGAMIWWGKDPHSVPAFS 126

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             +    +   ++V+     +   + ++  R+    A     DN
Sbjct: 127 AGGP-----------ILVAGAAIQTQAFWVVGVSALIVIGLTVFFHRSTYGKAMLACADN 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             A   +   +    L +F +S+     AG                    +       LG
Sbjct: 176 PNAARMVGIPVRRMVLLSFVLSAGIGAAAGVIITPISMM--EFDRGALLGLKGFGAAALG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S      A AIL      C G     +   +                        + 
Sbjct: 234 GLGSFFGALVAGAILGLAESFCAGYVSSGYKDAVALVLLLLAL-------------FFKP 280

Query: 337 HSLLR 341
             L  
Sbjct: 281 EGLFG 285


>gi|226357076|ref|YP_002786816.1| high-affinity branched-chain amino acid ABC transporter permease
           [Deinococcus deserti VCD115]
 gi|226319066|gb|ACO47062.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease component [Deinococcus deserti VCD115]
          Length = 288

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 93/304 (30%), Gaps = 25/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GL++V G + + +      Y +GAY      +   +S    + +
Sbjct: 8   LFNALALGGVYALVALGLTLVYGVMRVPNFAHGGLYMLGAYLTFAGLTLLKISYVPALLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           SA++      +M         +   +  +I +      L                  ++ 
Sbjct: 68  SAVVVALLAALMERVIFYPLRNAPHVHPMIAALGVLFFLEALIA----------HPAVFG 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +         + V+       V+         +  +L+RT        +  N++
Sbjct: 118 PDFKQIAEPVPGIATIAGVVITWQRLIVIAASVAAMLGLNFFLKRTLTGATIEAMAQNRE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        +  FA+S A   +A +  A               N+ V +I+ILGGM
Sbjct: 178 GARLVGINTDRVGMLTFAISGALAAIAASLIAPINSV--TPSMGEVMNLKVFAIIILGGM 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L              F  ++ F               L LV+ ++   
Sbjct: 236 GSVPGAIVGAFLLAFSEVFGGFYINLDFADVIGF-------------AMLVLVLAIKPQG 282

Query: 339 LLRL 342
           L R 
Sbjct: 283 LFRR 286


>gi|223041807|ref|ZP_03611997.1| hypothetical protein AM202_0409 [Actinobacillus minor 202]
 gi|223017379|gb|EEF15800.1| hypothetical protein AM202_0409 [Actinobacillus minor 202]
          Length = 332

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 105/310 (33%), Gaps = 11/310 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                ++  +   +      +   I ++G+Q     +   G + V+   G + L+     
Sbjct: 14  ALAGLILLVIFFSVTNDYFFTSNNIMTVGLQTSTIALIGIGATCVI-LTGGIDLSTGSVV 72

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+   +  ++ +       + + +S ++ GACG+  G+   + +      ATL M  + +
Sbjct: 73  ALSGVAAAMIVNAGVPVP-IGMVLSILVGGACGLTNGILVTQMKLPPFI-ATLGMMMVAR 130

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    +TN      + +    LG      I          +    + Y ++ M F++
Sbjct: 131 GLAL---YVTNAAPVSGMPESFAVLGNGALFKIVEEGPNGLPKVVFAGIPYPVIIMLFIT 187

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L +  +      I  N++A           K+ A+  S    G+ G   A+   
Sbjct: 188 VLFTFALTKLKVGRYIYAIGSNEEAARLSGIKTNVIKIYAYVASGLLSGLTGVILASRLV 247

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E   + S V+     +GG+ ++      + I+  +           F  +
Sbjct: 248 TAQPNGGVAYELDAIASAVVGGTSLMGGVGTIPGTLIGSFIIGVLRNGLNMNGVSSFVQM 307

Query: 310 LKFDCSFNMR 319
           +       + 
Sbjct: 308 IVIGLVIIVA 317


>gi|158424817|ref|YP_001526109.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158331706|dbj|BAF89191.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 314

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 112/280 (40%), Gaps = 14/280 (5%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++  + L Y + A  LS ++G  GL+S      + IGAY+ +I G      + +++P++A
Sbjct: 36  TLVTRTLAYALAAVSLSFLIGQCGLVSFGHAAPFGIGAYAVLIAGEAGVREVLVVLPLAA 95

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
             +     + G  +L+ RG Y  + TL  +++   +         G  G+ +A R  F G
Sbjct: 96  AAAALFSAVTGAIALRTRGVYFIMITLAFAQMAFYVAASLSA-YGGDDGMAIAGRSTFFG 154

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                           +  +  +  + + +  L+  +   L  +      R  R N+   
Sbjct: 155 IRF-------------LKADTSLALLAIALVGLALFLFQRLAASRFGLMLRAARANESKV 201

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +L       +L A A++ A  G+AGA  A   + +SP +  +  +  +I +V+LGG+  
Sbjct: 202 EALGLAPYRHRLIALALAGAVAGLAGALIANQVEYVSPALMGWHVSGELIVMVVLGGIGH 261

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
                    ++  + E    +  ++   L        +  
Sbjct: 262 PVGAVIGAVVVTLLDESLGHLTEHWRLGLGLVIILVALLR 301


>gi|118592417|ref|ZP_01549809.1| ABC transporter permease protein [Stappia aggregata IAM 12614]
 gi|118435075|gb|EAV41724.1| ABC transporter permease protein [Stappia aggregata IAM 12614]
          Length = 337

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/325 (15%), Positives = 111/325 (34%), Gaps = 33/325 (10%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             ++ + + L L      K    +  +  + +  A   +++ G  G++ +   +    G 
Sbjct: 10  VTLFAVAVVLCLLPLVLSKAGLVLATEFCVVLAIALAWNLLAGFSGIVLIGMPLFIGAGG 69

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  ++ +  G+  +  I   A +       +     +  G  LAI + +M+E+ + + +
Sbjct: 70  YTLYLVANALGIPPYPAILAGAAVPAVIAYALSPLLFRLEGAQLAIGSWVMAEVARLLCL 129

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +  G        RL      +                    +     + F++ S I
Sbjct: 130 ITPAVGAGGGLNLEVLRLVPRSLRLP-----------------LNFAFAAIVLFITLSAI 172

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L ++      R +RD+  A  ++       KL     ++A  G AGA +  +  +I+P
Sbjct: 173 VILLKSRFGLGLRAMRDSDAAAEAMGVKTSRVKLLTLITATALSGAAGACYYITSIQITP 232

Query: 259 DMFKFSENIIV-ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
                   I + I IVILGG+ S+        +   + E    +   YF           
Sbjct: 233 SSAFSQNWIAITIFIVILGGIGSVEGPIFGAIVYYLLRETLSDLGPGYF----------- 281

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                +  +    V +     +  L
Sbjct: 282 ----VISGLLAITVTIFLPEGVWGL 302


>gi|39934305|ref|NP_946581.1| putative ABC transporter permease [Rhodopseudomonas palustris
           CGA009]
 gi|192289833|ref|YP_001990438.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|39648153|emb|CAE26673.1| putative ABC transporter, permease protein [Rhodopseudomonas
           palustris CGA009]
 gi|192283582|gb|ACE99962.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 290

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 86/303 (28%), Gaps = 27/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G  ++  +  +++        +GA+      +  GL+ W    +
Sbjct: 8   VIGGIALGCVYGLIALGFVLIYKATEVVNFAQGEIMMLGAFLSFTFIATLGLNYWFGFLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +     G  M    ++    Y   + ++ +     ++     I  G            
Sbjct: 68  CVVSMAVLGAAMERLVVRPILGYPQFSIVMATIGLGLVIRSLVGIIWGTD---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +           ++       +++    L A +  + R T I  A +    N  
Sbjct: 118 -DLRIETPFTGGVIQLGGLVLSQDSLSIIVATALLCAVLYAFFRFTKIGIAMQATSQNML 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A + +   +       +++S+     AG   A      +   F     I      +LGG 
Sbjct: 177 AAYYMGIPVKRMFSLIWSLSAIVACCAGVLLAPITFIHANLGF---LGIKAFPAAVLGGF 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +  V  L        F  +                I L  V+L R   
Sbjct: 234 GSIPGALAGGITIGIVESLSGFYLPEGFKDVAA-------------YIVLLAVLLWRPQG 280

Query: 339 LLR 341
           L  
Sbjct: 281 LFG 283


>gi|149203798|ref|ZP_01880767.1| hypothetical protein RTM1035_07018 [Roseovarius sp. TM1035]
 gi|149142915|gb|EDM30957.1| hypothetical protein RTM1035_07018 [Roseovarius sp. TM1035]
          Length = 396

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 61/335 (18%), Positives = 129/335 (38%), Gaps = 57/335 (17%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +        L+LF  + +  +  ++  + I    Y + A   +++ G  G  S   +   
Sbjct: 8   IAGYVAAALLVLFPLVYSAGNYDFVMHLWITAFYYAVLASSWALLAGYGGQFSFAHLAFM 67

Query: 75  AIGAYSYVI-------------------------------------------------LG 85
           A+GAY   I                                                   
Sbjct: 68  ALGAYGAGILDNYVFLTSLPTGTCTEFGFLGTNIVFLPPSGTGDAAACLTAARATWPEGA 127

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           +     + L I   A++ G  G ++G   L+ R  YLA+ T+ +SEI + +L     +T 
Sbjct: 128 TVSRFPLILQIAFGAIVGGGAGWLIGTLVLRLRAAYLALFTVGLSEILRAVLSAEIWLTR 187

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G+AG+ ++       T + +              ++  YYV+L +   + +++LW+ R+ 
Sbjct: 188 GQAGMPMSPLFPDGITILGTTY--------GPAAKLPAYYVMLALFLGTLALLLWVARSR 239

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           I    R++R+++ A  +L    +  K + F +++A    AGA        I+P+     +
Sbjct: 240 IGLFLRSLREDEDAAEALGVDTVKWKRAVFVLTAAIAATAGAVQGHYVGLITPNTIVLLQ 299

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             +VI++ ++GG+ ++   A    ++   +E    
Sbjct: 300 MSLVIAMAVIGGLENVVAAAIGAILISFALEFLRT 334


>gi|39933744|ref|NP_946020.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009]
 gi|2190589|gb|AAC13365.1| putative ABC transporter subunit [Rhodopseudomonas palustris]
 gi|39647591|emb|CAE26111.1| putative membrane spanning subunit of ABC transporter
           [Rhodopseudomonas palustris CGA009]
          Length = 286

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 105/303 (34%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL++V G LG+++L+    Y +GAY   +  +     ++L +   
Sbjct: 9   LNGLQTGLVIFLAASGLTLVFGILGVINLSHGSFYMLGAYL-ALSLTGMFGDVFLALVAG 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             ++   G+ +    ++   D   +  ++++     I  +++ +  G     +       
Sbjct: 68  IPLAFLLGLAIEWLFIRHLYDRDHLQQVLLTFALILIFNEFQQVVWGSYPHSIPAP---- 123

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                S +      +  + Y ++   ++     L+ ++ L +++T I    R    N++ 
Sbjct: 124 -----SYLANSVRLTEGLSYPVYRLALMAICVALAIAMALVIQKTRIGRLIRAAESNREM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L           FA   A    AG   A                I+   +V++GG+ 
Sbjct: 179 VEALGFDSRLIFRMVFATGVALAATAGMLAAPIESA--YPGIGDRVLIVSFVVVVIGGIG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+      + ++                             + ++   + LV+++R   L
Sbjct: 237 SVRGAFIGSLLIGMADAFGKVF--------------LPQFSSIIIYALMALVLVIRPAGL 282

Query: 340 LRL 342
              
Sbjct: 283 FGR 285


>gi|239982826|ref|ZP_04705350.1| branched-chain amino acid ABC transporter permease protein
           [Streptomyces albus J1074]
 gi|291454671|ref|ZP_06594061.1| branched-chain amino acid ABC transporter permease [Streptomyces
           albus J1074]
 gi|291357620|gb|EFE84522.1| branched-chain amino acid ABC transporter permease [Streptomyces
           albus J1074]
          Length = 298

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 95/292 (32%), Gaps = 25/292 (8%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSR---YGLSIWLLIPVSAMISGACGMIMGLPSL 115
             G + ++++        GAY+  +L       GLS+ L +PV+ +++G  G+ +    +
Sbjct: 28  TFGQMNVINMAHGEFIMAGAYTTYVLQQHLAGAGLSLLLALPVAFLVAGVLGVALEHLLI 87

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
           +          L+   +   +    + +         A        T+           +
Sbjct: 88  RRLYLRPLDTLLVTWGVSLMLQQLARDLFGAPNVQTRAPDWLTGHLTLP-------LGGA 140

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
            +       ++L        ++ L LRRTA+    R +  +++              + F
Sbjct: 141 ELSLATSRLFILALALAAVGTLALVLRRTALGRRVRAVVQHRELAEVSGIPTGRVDRTTF 200

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            + S   G+AG   A +           +  I    +++ GG+  L     A  +L  + 
Sbjct: 201 FLGSGLAGIAGV--ALTLVGPIGPAMGTNVIIDAFLVIVAGGIGRLRGCVVAAFVLGVLQ 258

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
            +                 +        +++AL   +  R   L  LRT S 
Sbjct: 259 SVLEW-------------STTVSVAKVAVLVALVAFLQWRPQGLYTLRTRSL 297


>gi|121608642|ref|YP_996449.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121553282|gb|ABM57431.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 849

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 82/297 (27%), Gaps = 26/297 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
                  S   + ++G Q  +    A+ ++ V+     + ++     A  +    +    
Sbjct: 45  ATAPQYLSLSNLLNIGQQTAVIACVAYAMTAVI-ICKGVDISVGSTLAASSVIAALALQS 103

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
            GL  WL I +   +  A G++ G+        Y  I+ L+ +     +        +G 
Sbjct: 104 AGLPGWLGIVLVIAVGAAFGLLGGVLV-----SYAGISALVATLAVSALARGMALSASGS 158

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                          V S +  +    +     +     +L        +    +RT   
Sbjct: 159 R-----------SVAVDSALYLWFGRGTLAGVPVSFLIAILLAGLWCVLL----QRTVFG 203

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                   N+ A  +    +   +L  + ++ A  G+             P      E  
Sbjct: 204 RWVYASGGNEDAARASLIPVRAVRLMTYVLAGASAGIGALLTTGRVGSAQPLAGAGLEFA 263

Query: 268 IVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            + + ++      GG  S+   A    +L  V      +      +           
Sbjct: 264 AITAAIVGGSRLSGGHGSIIGTALGALLLGAVNTGLSFLQVSQQVNYFVTGAFVIAA 320


>gi|159044525|ref|YP_001533319.1| putative branched-chain amino acid transport system / permease
           [Dinoroseobacter shibae DFL 12]
 gi|157912285|gb|ABV93718.1| putative branched-chain amino acid transport system / permease
           component [Dinoroseobacter shibae DFL 12]
          Length = 305

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/316 (11%), Positives = 93/316 (29%), Gaps = 23/316 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--------YVILGSRYGL 90
           +    +   I  + A GL++ +  L   + +     +IGAY+          +L +    
Sbjct: 5   LLDGILVGAILSLGAIGLTLTMHMLRFANFSHAELLSIGAYAALVFDALFSALLPALQTA 64

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              L +  +  ++    M +   S       +             +   +      +  I
Sbjct: 65  IPPLSLTWTLSLATVASMALTGLSAIAIDRLIFKRVREKGGELSMVFASFGVAMVIRNLI 124

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +   L     +   +          ++ +    + L+    +   + L L RT    + 
Sbjct: 125 GLGFGLNTQLYSDDIVFATVLSRDPLILVKPDQVFTLVAALAIMVVLHLVLSRTTFGYSL 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R + +N          +       + +       AG F+  +       +      + + 
Sbjct: 185 RAVAENPVLAQVSGINLQRMVALIWILGGTLAAAAGVFYGLTNQI--TPVIGRDLVLPIF 242

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  I+GG+ S+        ++     L   +    ++  + F             + L  
Sbjct: 243 AATIVGGIGSIYGAVLGGFLVGIAANLALVVLPSGYSPSVPF-------------LILVA 289

Query: 331 VILMRSHSLLRLRTPS 346
           V+++R H L      +
Sbjct: 290 VLVLRPHGLFGEARAT 305


>gi|260433716|ref|ZP_05787687.1| branched-chain amino acid ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417544|gb|EEX10803.1| branched-chain amino acid ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
          Length = 437

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 55/348 (15%), Positives = 112/348 (32%), Gaps = 25/348 (7%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V  LLL                  +     + A  +        +   +     AI   
Sbjct: 91  IVLALLLGAATVVAAVMAARKLPKGRTQTLAIIAILVVGFFVYRAVFDPSVAAVEAIDP- 149

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +         L + L  P   +++     ++G  +L  R DYLAIATL ++EI   I+  
Sbjct: 150 AVAGNIGGLNLPVLLAWPAGGLLAAGAAWLIGKTALGLRSDYLAIATLGIAEIIIAIMKN 209

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF------------PSSFVIYEIFMYYVL 187
              +  G   +Y   R          L     F             +S +  +    ++ 
Sbjct: 210 EDWLARGVKNVYGIPRPTPFVGYEIDLQSDPSFVERAAGLGLDPVTASTLWVKTGYAFLF 269

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +  +   +     ++      R IRDN+ A  ++   +    L  F + SA  G+AGA
Sbjct: 270 LVVLLVLLWMAQMALKSPWGRMMRAIRDNEVAAEAMGKDVTRRHLQIFVLGSAICGIAGA 329

Query: 248 FFAASRDRISPDMFKFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                  +++P  ++      +V  +VI+GG  +         ++  +      +  +  
Sbjct: 330 MMTTLDGQLTPSAYQPLRFTFLVWVMVIVGGSGNNFGSVLGAFLIWFLWVQVEPIGLWLM 389

Query: 307 NSLLKFDCSFNMR-----------HTTLMVIALFLVILMRSHSLLRLR 343
           + +       +                 M + L +V+      L+  +
Sbjct: 390 DLITAGMPDDSAIKTHLLDSAAHMRLFTMGLILLIVLRFSPRGLIPEK 437



 Score = 42.5 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 33/86 (38%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L       L L  G  +S      +    LI  + A G+++  G  GL ++  +   A+G
Sbjct: 9   LLFAVVAGLILVTGFMQSWNTAILIINMGLISAIMAIGVNLQWGFAGLFNVGVMGFVALG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMIS 103
             + V++ +      W       +++
Sbjct: 69  GLAVVLVSTPPTPGAWSAGGYGIVLA 94


>gi|167041472|gb|ABZ06223.1| putative branched-chain amino acid transport system / permease
           component [uncultured marine microorganism
           HF4000_007D16]
          Length = 337

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/335 (9%), Positives = 93/335 (27%), Gaps = 19/335 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            +      S   +           + A G++I+ G L   +       A      ++   
Sbjct: 4   LINALVLLSNFVLIPAITYGSQLALGALGITIIYGILRFANFAYGDLMAFATTFTILFTW 63

Query: 87  RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            +              L IP + +++    +I       +     + +  I       + 
Sbjct: 64  YFQSIGISFGVLPTALLAIPFAIIVTIIFCLITDKLVFGYYRIKKSPSVTIAMVSLGVMF 123

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +    +                     +  +     +  +  +      ++    + + +
Sbjct: 124 VTNAIVRIIIGPYDRRFADGERFIIRANEFKEMTGLNEGLAIKSTQVLTIVITIIVVSLL 183

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L +T    + R   DN+        +     +  + + +     AG+ +   +    
Sbjct: 184 FWFLNKTKTGKSMRAYSDNEDLALLSGISPARVVMITWIIVAILATFAGSLYGLDKSF-- 241

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK------ 311
                FS  + + +  I+GG+ +         ++     +       +F  LL       
Sbjct: 242 KPFTYFSLLLPIFASAIVGGIGNPVGALVGGYVIAFSEIIITYAYKKFFAYLLPESLEPN 301

Query: 312 --FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                        +    L +V+L+R   +L+ +T
Sbjct: 302 TLVQFLSTDYKFAVSFSILVIVLLVRPTGILKGKT 336


>gi|254362121|ref|ZP_04978241.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Mannheimia haemolytica PHL213]
 gi|261491778|ref|ZP_05988358.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261495473|ref|ZP_05991920.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|153093682|gb|EDN74637.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Mannheimia haemolytica PHL213]
 gi|261308807|gb|EEY10063.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261312617|gb|EEY13740.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 332

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 104/310 (33%), Gaps = 11/310 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                V+  +   +      +   I ++G+Q     +   G + V+   G + L+     
Sbjct: 14  ALAGLVLLIIFFSVTNEYFFTSNNIMTVGLQTSTIALIGIGATCVI-LTGGIDLSTGSVV 72

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+   +  ++ +       L + +  ++ G CG+I G+   + +      ATL M  + +
Sbjct: 73  ALSGVAAAMIVNAGVPVP-LGMILGILVGGICGLINGILVTRMKLPPFI-ATLGMMMVAR 130

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    +TN      + +    LG      I          +    + Y ++ M F++
Sbjct: 131 GLAL---YVTNAAPVSGMPESFANLGNGALFKIVEEGANGLPKVVFAGIPYPVIIMIFIT 187

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L +  +      I  N++A           K+ A+  S    G+ G   A+   
Sbjct: 188 VLFTFALSKLKVGRYLYAIGSNEEAARLSGIKTNIVKIYAYVASGLLSGLTGVILASRLV 247

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E   + S V+     +GG+ ++      + I+  +           F  +
Sbjct: 248 TAQPNGGVSYELDAIASAVVGGTSLMGGVGTIPGTLIGSFIIGVLRNGLNMNGVSSFVQM 307

Query: 310 LKFDCSFNMR 319
           +       + 
Sbjct: 308 IVIGLVIIVA 317


>gi|39937088|ref|NP_949364.1| ABC transporter permease [Rhodopseudomonas palustris CGA009]
 gi|39650946|emb|CAE29469.1| possible ABC transport system permease protein [Rhodopseudomonas
           palustris CGA009]
          Length = 288

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 94/304 (30%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       ++  + A GL++ +G +  ++L        G Y   +L +R G   +  +P+
Sbjct: 7   LFDGVAYGMLLFVLACGLAVTLGLMNFVNLAHGAFAMAGGYVCAVLVNRAGWPFFAALPL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + S A G ++     +       +  ++ S     + +       G +          
Sbjct: 67  AFLASAAIGAVLERLLYRHLYTRSHLDQVLFSVGLVFMSVAAVDYIMGSS---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                       +     V    +   +++    L+  + L L +T   +  R   D+ +
Sbjct: 117 RVFMQLPEALQGQIDLFGVGIGRYRLMIIVICGLLTIGLQLTLAKTRFGSRLRAAVDDPR 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       FA      G  GA  A          F     I  + +V +GG 
Sbjct: 177 VASGLGINVPQVFALTFAFGCGLAGFGGALSAEILGL--DPYFPLKFMIYFLIVVTVGGS 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S++    A+ +L                               ++   + ++++ R + 
Sbjct: 235 SSITGPFLASLLLGIGDVAGKYYLPKLGP--------------FVIYTIMIVILIWRPNG 280

Query: 339 LLRL 342
           L   
Sbjct: 281 LFGR 284


>gi|84516997|ref|ZP_01004354.1| ABC-type transport system permease protein II (probable substrates
           branched-chain/neutral amino acids) 2 [Loktanella
           vestfoldensis SKA53]
 gi|84509115|gb|EAQ05575.1| ABC-type transport system permease protein II (probable substrates
           branched-chain/neutral amino acids) 2 [Loktanella
           vestfoldensis SKA53]
          Length = 311

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 57/326 (17%), Positives = 113/326 (34%), Gaps = 40/326 (12%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +         L       Y   +G+ I ++   A   ++  G    +SL     + +G
Sbjct: 11  VLLATLGFGVCALLPFADTGYWLGLGVTIAMFTALATSWALFSGPTHYISLATAAFFGVG 70

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y   +         W L+ ++ +I      ++GL +L+  G Y  I TL ++E+ + ++
Sbjct: 71  TYVTGLGIETLP--FWALVGLAGLIGAGLAALVGLATLRLSGVYFVIFTLGLAELVRQVI 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                                  T V++            + E  +Y+ LLG+C      
Sbjct: 129 -----------------------TWVQNNTGQKGLYVLTDLDEAGIYWWLLGLCAAVFLT 165

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              + R+ +  A R I D++            AK+  F V  A   M GA  A     I 
Sbjct: 166 GWLIGRSRLGFALRIIGDDEIVAAHSGINTARAKILLFMVPGAVAAMTGAILAPRYVYIE 225

Query: 258 PD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P   F    +  V+ + +LGG + L            ++E                  +F
Sbjct: 226 PSLAFAPILSFQVVIMALLGGASRLWGPVVGVIPFTFLLETVSS--------------NF 271

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
             + T ++ +A  +++ +  +  + L
Sbjct: 272 PNQTTLVIGVAFLVIVYLLPNGFVGL 297


>gi|319951291|ref|ZP_08025126.1| branched-chain amino acid ABC transporter integral membrane subunit
           [Dietzia cinnamea P4]
 gi|319435064|gb|EFV90349.1| branched-chain amino acid ABC transporter integral membrane subunit
           [Dietzia cinnamea P4]
          Length = 425

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 97/333 (29%), Gaps = 31/333 (9%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-- 84
              L       +   +  +   Y + A G+ +  G  G+L+L   + + +GAY+  +   
Sbjct: 55  IFGLAPLLLSDFRLGLLAKFFCYAIVASGIGLAWGRGGMLTLGQGVYFGVGAYAMAMFLK 114

Query: 85  ---------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                            +   +  L        S    + + L                 
Sbjct: 115 LSDARDRGGPDALPDFMQIAGTRELPGYWVPFASPGFTIAVILLVPPLLAFGFGYLVFHR 174

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                   I  + +    A   V+         +     FF F  S       +Y++  G
Sbjct: 175 KVKGAYFAILSQALAAAAAIFLVSRPELGGSNGLNRFTGFFGFALSDPANRRMLYFLAGG 234

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
                  ++  L ++        +RD ++    L       K  A+AV++   G+AGA F
Sbjct: 235 ALLAVVLLVRQLMQSRFGELLVAVRDQEERVRFLGYDPALIKSFAYAVAAFAAGIAGALF 294

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                 ISP     + +I  +  V +GG  +L         +                  
Sbjct: 295 VPIVGIISPSAIGIAPSIAFLIGVAIGGRATLLGPVLGAIGVAWAQT------------- 341

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             F  ++  + T L  +   +V+      L  L
Sbjct: 342 -AFSEAYPSQWTYLQGVLFIVVVGFLPGGLASL 373


>gi|158421821|ref|YP_001523113.1| putative inner-membrane translocator [Azorhizobium caulinodans ORS
           571]
 gi|158328710|dbj|BAF86195.1| putative inner-membrane translocator [Azorhizobium caulinodans ORS
           571]
          Length = 316

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 99/313 (31%), Gaps = 31/313 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA---------YAIGAYSYVILGSRYG 89
           I +      IY + A G S++ G L ++  +              A+ A    +  +   
Sbjct: 20  IVNWITLGSIYALIALGFSLLFGVLNIIHFSHGDVSLLAPFLALAAVSAVGSALGDAASP 79

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
               L + ++  ++G  G+++ +  ++      A+  L+ +     +L +          
Sbjct: 80  AVFLLALAIAIGLTGVIGVLLDIVVIQRFRKAPAMMALVATVALGIVLRELIRHLF---- 135

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                            +             +F   V+        ++ L L  T +   
Sbjct: 136 ------PNGSNPHAFPRLVSGDITLGRFNVPVFSLMVVAVSVACVCALFLMLNGTRLGLH 189

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            + +  ++ A   +         + F V+SA   + G FF++         F     +I 
Sbjct: 190 IKAVSQDRDAARLMAIDPGRIFRATFFVASAIGAVGGLFFSSYAGMA-RFDFSVDVGLIG 248

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            S  ++GG+ S+      + ++ G+  L   +             +        + + + 
Sbjct: 249 FSAAVVGGLGSMPGAIIGSLLIAGLDTLVQAVVP-----------NGASYRLVFVFLLVI 297

Query: 330 LVILMRSHSLLRL 342
            V++ R   L+  
Sbjct: 298 AVLVFRPSGLMGR 310


>gi|72384135|ref|YP_293489.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72123478|gb|AAZ65632.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 289

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 101/291 (34%), Gaps = 27/291 (9%)

Query: 54  WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113
            GL+++ G + +++      Y  GAY+  I  +R+  S W+ +  + +++GA G +  L 
Sbjct: 26  VGLTLIFGIMRIMNFAHGALYMFGAYA-GISAARFFDSFWIGLIAAPLVAGAVGSVFELL 84

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
            ++        + L+++  +   L +   +  G     V     F               
Sbjct: 85  LMRHLYRRDGSSFLLITFGWALALSELTRLIWGSNTRDVPIPEAFNNVLF---------- 134

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
            +   + ++  ++++    +   +I+ L ++ +    R+I  N +   +L   +   +  
Sbjct: 135 IAGEPFPLYRAFLIVFGFSVLGLLIVVLLKSRLGLLIRSISQNPEMTHALGVDVGVIRSL 194

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            FAV  AF G+ G                 +  I    IV++GGM S    A  + ++  
Sbjct: 195 TFAVGCAFAGLGGYLAVPLIT--GYIGMGSAAIIDSFVIVMIGGMGSFIGSAVGSILVAA 252

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                                        L  + +  V++ R   L     
Sbjct: 253 TQTFGNFY--------------IPDFALVLTYVLMICVLVYRPGGLFGEEE 289


>gi|170745294|ref|YP_001766751.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
 gi|170658895|gb|ACB27949.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
          Length = 291

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/297 (10%), Positives = 72/297 (24%), Gaps = 26/297 (8%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            +Y + A G  ++  +  +++        + A+  V+         WL + ++       
Sbjct: 16  SVYALVALGFVLIFRATNVVNFAQGEFSMVAAFLMVVFAVDLQWPYWLSLLLTLGGMALL 75

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G +  L           +  +I +      L        G     +              
Sbjct: 76  GALFNLGVYYPLRHRSYLPVIISTIGASIFLANTTLALYGPQPQVLPPVFET-------- 127

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                F    V  +     ++     L A    +   T +    +    +++    L   
Sbjct: 128 ---QGFLLGPVFLDSQYLLIIAVTAALVAFQYWFFEHTLVGKKLQATSQDKEMAALLGIP 184

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +    +  F  S+   G+AG   A             +  +   +  I+GG   ++    
Sbjct: 185 VAGMIMLTFVYSAVLGGIAGILVAPVLFV--SIQMGATIALKAFAATIIGGFGDVTGAII 242

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
               L  +           +     F                      R   L   R
Sbjct: 243 GGLALGIIETFGAAYISVPYKDAFAFLVLVVFLVV-------------RPQGLFGER 286


>gi|71084037|ref|YP_266757.1| branched chain amino acid ABC transporter permease [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|71063150|gb|AAZ22153.1| Branched-chain amino acid transport system/permease component
           [Candidatus Pelagibacter ubique HTCC1062]
          Length = 336

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/334 (8%), Positives = 88/334 (26%), Gaps = 19/334 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           FL                      + A  ++++ G L   +       A G    ++   
Sbjct: 3   FLNAIILLLNYIFMPALTYGSQLALGAIFVTLIYGILRFANFATGDMMAFGTMVTILFTW 62

Query: 87  RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            +              L IP + +++    +++     ++     +    +       + 
Sbjct: 63  YFQSLGISLGVLPTALLAIPFAIVLTIGYMLLIDKFVFRYYRVSKSPPVQLAMVSIGVMF 122

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +    +                     S  +     +  +  +      +     L + +
Sbjct: 123 VTQAVVRIIIGPSDQRFFDGEKFIIKASEFKEMTGLNEGLAIKSSQVLTIFVTIVLVSIL 182

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L +T    + R   DN+              +  + ++     + GA +   +    
Sbjct: 183 FWFLNKTKTGKSMRAYSDNEDLALLSGIDPKRVVMITWIIAGILATIGGALYGLDKSF-- 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK------ 311
                F+  + + +  I+GG+ +         ++             +F  +L       
Sbjct: 241 KPFTYFNNMLPIFAAAIVGGIGNPFGAFLGGYVIAFSEIFLTYAYKKFFMYVLPASMEPE 300

Query: 312 --FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                        +    L +V+L R + + + +
Sbjct: 301 TLVQLLSTDYKFAVSFSILVIVLLYRPNGIFKGK 334


>gi|325168848|ref|YP_004280638.1| ABC transporter transmembrane protein [Agrobacterium sp. H13-3]
 gi|325064571|gb|ADY68260.1| ABC transporter, membrane spanning protein [Agrobacterium sp.
           H13-3]
          Length = 297

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 49/295 (16%), Positives = 96/295 (32%), Gaps = 16/295 (5%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G++G++++       IGAY  V+ G      +   IP++ +++   G+++ 
Sbjct: 18  VALGLAITYGAMGVINMAHGEMVMIGAYVAVLSGIWLKTGLLFAIPLAFVVTALLGLVIE 77

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
              ++     L    L    I   +    +            + L      V        
Sbjct: 78  RVVVRRLYGRLLDTLLATWGIAILLQQAVRLEFGLSFFGIHIEGLGAGLQNVAVPSYLQG 137

Query: 172 -FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
            F  +      +  +++     L+ +    L RT      R I  N K   +    +   
Sbjct: 138 TFRFAGADINAYRTFIIAVTATLTLATWFILYRTTAGMQVRAIIRNPKMAAACGIDVKRI 197

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
               FA  S   G+AG   +  +            +     +V+ GG+ SL   A ++ +
Sbjct: 198 NALTFAFGSGLAGVAGVMMSGFKTVFPDMGTTMVVDG--FMVVVTGGVGSLFGTALSSGL 255

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           L  +  L            + F               + LVIL++   L   +  
Sbjct: 256 LGEINALVAIGTNDILARAVVFG-------------VVILVILVKPSGLFSFKGR 297


>gi|116625232|ref|YP_827388.1| inner-membrane translocator [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228394|gb|ABJ87103.1| inner-membrane translocator [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 319

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/300 (16%), Positives = 96/300 (32%), Gaps = 26/300 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGA--TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
           R      +L +L +   +      G+        +  +  QI +  + +  ++ V+   G
Sbjct: 9   RARSLVALLGILVLAVIISPTAADGSRIFLQAGNLTDILRQISLIGILSLAMTFVI-LTG 67

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+     A+      +  +R   +   +  ++A+++ A    +    +        I
Sbjct: 68  GIDLSVGSILALSTAITAMFLTRGYTAHIAVAILAAVLASALAGALNGVVIAATRIQPFI 127

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL      + +        N   G                        + F        
Sbjct: 128 VTLASMIGVRGLAKWLTSNQNIDIGF------------------GRDLAAEFAAVFREKA 169

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            V+      +A     L RT      R + DN+KA       I   K+  + +S  F G 
Sbjct: 170 IVIGAYAAAAALFWFALSRTVFGRHVRAVGDNEKAAEYAGLPIAATKIWVYTLSGLFSGF 229

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
           AG  +AA   + +P+     E   + ++VI      GG  S+S     T I+  +  +  
Sbjct: 230 AGVLYAAENHKGNPNAGVAYELDAIAAVVIGGTRLSGGKGSISGTIIGTLIMGVLTNMLR 289


>gi|300311564|ref|YP_003775656.1| branched-chain amino acid ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300074349|gb|ADJ63748.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 404

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 114/332 (34%), Gaps = 32/332 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            LL  +   L+ L       Q    S+  Q+   V+     ++++G  G+LS    +   
Sbjct: 6   LLLPWLGFALVLLAAPLVFPQSAALSLLSQMGTMVLLCLSYNMLLGEGGMLSFGHAVYSG 65

Query: 76  IGAYSYVILGSRYG-----LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           +GA+  + L +R         + L+     +    CG+++G  + +  G   A+ TL + 
Sbjct: 66  LGAFGAIHLMNRMAEGALAFPMTLVPLAGGLTGALCGVLLGYLTTRRAGTTFAMITLGLV 125

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
           E+    ++ +  +  G+ GI              + +            +I +YY++ G 
Sbjct: 126 ELVSACVLMFPEVFGGEGGIS------------GNRVIGEPVLGISYGPQIQVYYLIAGW 173

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             + A  I  LR T +      +RDN +    +       +  A  +S+ F G++G   A
Sbjct: 174 LLVCAIAIWALRATPLGRILNAVRDNPERAAFIGYDPQRVRYLALILSAFFAGVSGGLSA 233

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            + + +S +      +  ++    +GG            + +            +     
Sbjct: 234 INFEIVSAEYVGALRSGAILLFTFIGGSAYFYGPIVGGVVGVLFSSWLSAYTQAW----- 288

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                        +     L+++     L  L
Sbjct: 289 ----------QFYLGAFFILIVMTAPGGLASL 310


>gi|266623705|ref|ZP_06116640.1| branched-chain amino acid ABC transporter, permease protein
           [Clostridium hathewayi DSM 13479]
 gi|288864477|gb|EFC96775.1| branched-chain amino acid ABC transporter, permease protein
           [Clostridium hathewayi DSM 13479]
          Length = 162

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 46/138 (33%), Gaps = 14/138 (10%)

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
              +  IRD +             K+  +A+S+   G+AG  +      ISP       +
Sbjct: 1   GKVFIAIRDGENRAGFAGYNTAKYKVFVYALSAMIAGLAGMLYVGQVGIISPAEVGIVPS 60

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           + +I  V +GG  +L+        + G   L                 +F    +  + I
Sbjct: 61  VEMIIWVAIGGKGTLAGPILGALAVNGFKTLASE--------------NFPELWSYFIGI 106

Query: 327 ALFLVILMRSHSLLRLRT 344
              +VIL      + L+ 
Sbjct: 107 LFVVVILWLPGGFVSLKE 124


>gi|192289164|ref|YP_001989769.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|192282913|gb|ACE99293.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 286

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 101/303 (33%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL++V G LG+++L+    Y +GAY  + L   +G     LI   
Sbjct: 9   LNGLQTGLVIFLAASGLTLVFGILGVINLSHGSFYMLGAYLALSLTGMFGDVFLALIAGI 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +             L    ++L I  L   +  Q +L+ +  I        V    Y  
Sbjct: 69  PLA----------FLLGLAIEWLFIRHLYDRDHLQQVLLTFALILIFNEFQQVVWGSYPH 118

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                S +      +  + Y ++   ++     L+ ++ L +++T I    R    N++ 
Sbjct: 119 SIPAPSYLANSVRLTEGLSYPVYRLALMAICVALAIAMALVIQKTRIGRLIRAAESNREM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L           FA   A    AG   A                I+   +V++GG+ 
Sbjct: 179 VEALGFDSRLIFRMVFATGVALAATAGMLAAPIESA--YPGIGDRVLIVSFVVVVIGGIG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+      + ++                             + ++   + LV+++R   L
Sbjct: 237 SVRGAFIGSLLIGMADAFGKVF--------------LPQFSSIIIYALMALVLVIRPAGL 282

Query: 340 LRL 342
              
Sbjct: 283 FGR 285


>gi|240949958|ref|ZP_04754275.1| ABC D-ribose transporter permease protein RbsC [Actinobacillus
           minor NM305]
 gi|240295580|gb|EER46304.1| ABC D-ribose transporter permease protein RbsC [Actinobacillus
           minor NM305]
          Length = 332

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 104/310 (33%), Gaps = 11/310 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                ++  +   +      +   I ++G+Q     +   G + V+   G + L+     
Sbjct: 14  ALAGLILLVIFFSVTNDYFFTSNNIMTVGLQTSTIALIGIGATCVI-LTGGIDLSTGSVV 72

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+   +  ++ +       + + +  ++ GACG+  G+   + +      ATL M  + +
Sbjct: 73  ALSGVAAAMIVNAGVPVP-IGMVLGILVGGACGLTNGILVTQMKLPPFI-ATLGMMMVAR 130

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    +TN      + +    LG      I          +    + Y ++ M F++
Sbjct: 131 GLAL---YVTNAAPVSGMPESFAVLGNGALFKIVEEGPNGLPKVVFAGIPYPVIIMLFIT 187

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L +  +      I  N++A           K+ A+  S    G+ G   A+   
Sbjct: 188 VLFTFALTKLKVGRYIYAIGSNEEAARLSGIKTNIVKIYAYVASGLLSGLTGVILASRLV 247

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E   + S V+     +GG+ ++      + I+  +           F  +
Sbjct: 248 TAQPNGGVAYELDAIASAVVGGTSLMGGVGTIPGTLIGSFIIGVLRNGLNMNGVSSFVQM 307

Query: 310 LKFDCSFNMR 319
           +       + 
Sbjct: 308 IVIGLVIIVA 317


>gi|119963850|ref|YP_947637.1| ribose ABC transporter permease [Arthrobacter aurescens TC1]
 gi|119950709|gb|ABM09620.1| ribose ABC transporter permease [Arthrobacter aurescens TC1]
          Length = 379

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 86/300 (28%), Gaps = 26/300 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
                  +   + ++  Q  I  +FA G++ V+   G + ++     A+ +   + +   
Sbjct: 55  FLSPVFLTTVNLVNLLYQCTILGVFAIGMTFVI-LTGGIDVSVGSTAALSSVLSMGVIVN 113

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             +   + +    ++    G + GL   K                   ++     ++ G 
Sbjct: 114 MDMPPAIGLLTGLVVGAGVGAVNGLMVTKL--------------GISPLIATLATLSAGS 159

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
              +       +    + L        + +   I    VL           L L RT   
Sbjct: 160 GIAFAYSDGGNITPVPKVLTDMVSAKIAGIPLLIPAVLVLA------FLAHLVLTRTTYG 213

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
            +   +  N++A       +    ++A+ ++    GMAG          SP      E  
Sbjct: 214 RSIYAVGGNKEAALLAGIRVDRVTMNAYIIAGLSAGMAGLLLTGRLASGSPRAGDGIELT 273

Query: 268 IVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           ++ ++VI      GG  ++        ++  V      +        +            
Sbjct: 274 VIAAVVIGGTSLFGGQGNIKGTLLGVLLIAMVSNAVNLLGIPSSYDRIVQGVVIFAAAAL 333


>gi|332528479|ref|ZP_08404467.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
 gi|332041990|gb|EGI78328.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
          Length = 291

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/307 (9%), Positives = 79/307 (25%), Gaps = 26/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      IY + A G +++  + G ++        + A+  +   +         +  
Sbjct: 8   LISGLATGGIYALAALGFTLLWQASGTINFAQGEFVMLPAFVMLAFMALGAPLWLGFVLA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +++     G       +     Y  +  ++ +      +                +    
Sbjct: 68  ASVSVLVLGWAFKRGVVDPLFKYGMMPIVVATIGLAITMSNGIRAGYSAEAHPFPNPFGD 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +  +        +           L+    L  +   ++ RT    A + +  N +
Sbjct: 128 HVFNIAGVTITSGGIGT-----------LVTALALVFATQAFMTRTVTGRAMQAVAQNTE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           +   L   +      AFA+++     A          ++                I+GG 
Sbjct: 177 SATVLGINVPRMIFYAFAINALLACAAALLVTP--TYLAKFDMGEGLGTKAFFAAIIGGF 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +         I+     L        +   +               +   +VIL +   
Sbjct: 235 NNSRGALLGGLIVGVAENLAAAYVSPAYKDAVAL-------------LIFMVVILFKPQG 281

Query: 339 LLRLRTP 345
           LL  +  
Sbjct: 282 LLGKKEE 288


>gi|319790792|ref|YP_004152432.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315593255|gb|ADU34321.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 290

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 103/304 (33%), Gaps = 25/304 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL+++ G +G+++L     Y IGAY    L   +G    L++   
Sbjct: 11  LNSVQYGLLLFLVASGLTLIFGIMGVINLAHGSFYMIGAYLAFSLAPLFGDQFLLMLVAG 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++   G ++      +      +  ++M+     +  + + I  G             
Sbjct: 71  VVLAAIFGYLLEWAFFSYLYQRDHLQQVLMTYGLILVFEELRSIFVGNDVH--------- 121

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G  V + +       + + Y  +  +       L+  +   + RT +    R    N+  
Sbjct: 122 GVKVPAWLDGSFALGNVMSYPWYRLFASAACIVLAVGLYWVVNRTRLGMMIRAGASNRDM 181

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L   +       FA   A   +AG   A             S  II   +V++GG+ 
Sbjct: 182 VRGLGIDVKRLYRIVFAAGVALAALAGMIAAPMSSV--YPNMGASVLIICFVLVVIGGIG 239

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S++    A+ ++  V                     F       + + + +V++ +   L
Sbjct: 240 SITGALLASLLVGFVDTFGKVF--------------FADLSGIGIYLLMAIVLIWKPEGL 285

Query: 340 LRLR 343
           +  R
Sbjct: 286 MGRR 289


>gi|306846166|ref|ZP_07478728.1| inner-membrane translocator [Brucella sp. BO1]
 gi|306273417|gb|EFM55278.1| inner-membrane translocator [Brucella sp. BO1]
          Length = 295

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 53/318 (16%), Positives = 113/318 (35%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           +++   +        +    I    Y M + GL+I+ G L +++      Y +GA+   +
Sbjct: 1   MVMIFGIPLQALLGQLLVGLINGSFYAMLSLGLAIIFGLLRIINFAHGAQYMLGAFVGYL 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L S  G+  W  + ++ +I G  G I+   +L    +   +  L+ +     ++      
Sbjct: 61  LLSWLGIGYWPALILAPVIVGLGGAIVERVALSRLYNLDPLYGLLFTFGLALVIEGTFRY 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G AG   A      G               F+    +  +V++   F+     L + +
Sbjct: 121 YYGAAGQPYAVPPSLAG----------GRNLGFMFLPNYRAWVVVASLFVCLGTWLLIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N     +    +       +A+ SA  G+AG   A         +   
Sbjct: 171 TKLGAYLRAATENPTLVKAFGINVPLLLTFTYALGSALAGLAGIMAAPIYQV--SPLMGS 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  I+V ++V++GGM S+        +L     L                  +    + +
Sbjct: 229 NIIIVVFAVVVVGGMGSILGAIITGYVLGIAEGLTKVF--------------YPEASSIV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           + + + +V+L+R   L  
Sbjct: 275 VFVIMAIVLLVRPAGLFG 292


>gi|239830908|ref|ZP_04679237.1| monosaccharide-transporting ATPase [Ochrobactrum intermedium LMG
           3301]
 gi|239823175|gb|EEQ94743.1| monosaccharide-transporting ATPase [Ochrobactrum intermedium LMG
           3301]
          Length = 364

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 83/303 (27%), Gaps = 18/303 (5%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
                 G   S   +  +  Q+ I  + A   ++V+ + G + L+      + +      
Sbjct: 66  FGVTLGGKFFSAFSLTLILQQVAITGIVAAAQTLVILTAG-IDLSVGAIMVLSSVVMGQF 124

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
             RYGL   L +         CG I G      R     +   +         +      
Sbjct: 125 TFRYGLPAELAVLCGFATGALCGFINGFLVAYVRLPPFIVTLGMWQVTLATNFL------ 178

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                 Y A+                 F  S  I      Y ++ M  L   +   L  T
Sbjct: 179 ------YSANETIRAQEITAEAPILQFFGESVRIGGAVFTYGVIAMVLLVLLLWYVLNHT 232

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
           A       I D+ +A      ++    +S + ++     +AG         +SP   +F+
Sbjct: 233 AWGRHVYAIGDDPEAAQLSGVSVKPILMSVYVLAGIICALAGWAMIGRLGSVSPTAGQFA 292

Query: 265 ENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
               + ++VI      GG  S+        I+                + L         
Sbjct: 293 NIESITAVVIGGISLFGGRGSILGTMFGALIVGVFSLGLRLWGTDPQWTYLLIGVLIIAA 352

Query: 320 HTT 322
              
Sbjct: 353 VAI 355


>gi|83311559|ref|YP_421823.1| branched chain amino acid ABC transporter permease
           [Magnetospirillum magneticum AMB-1]
 gi|82946400|dbj|BAE51264.1| Branched-chain amino acid ABC-type transport system, permease
           components [Magnetospirillum magneticum AMB-1]
          Length = 290

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 103/306 (33%), Gaps = 26/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +  L+Y + A GLS++ G + +++       A+  Y+   L +   L   + +P+
Sbjct: 11  ILTGLLTGLVYSLMALGLSVIFGVVRVVNFAHGEMTALAMYAAWALFNWLELDPLVGLPL 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A++  A G +M    +            I+      I++    +  G     +      
Sbjct: 71  IALLLFALGYLMQRGLIDAFVSKPEHMQFILLVAVAIIMVNGSLLVFGPDAHGIQVP--- 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                     F  +    ++ +       +    +S  ++L+ R T    A R   DN  
Sbjct: 128 --------YGFDTYEVGPLLIDKVRLLAAVAALGISGLLMLFFRHTMTGKAIRACADNLV 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + SA +G AGA  A   D            ++   IVI+GG+
Sbjct: 180 GARVIGLNVKQLYAVTFGIGSACVGAAGALLALLIDV--MPSSGPELTMLAFIIVIVGGL 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++     L          ++  F               L L++++R   
Sbjct: 238 GSMGGALLGGILIGVSEVLAGYFLMPSMKAMFSF-------------AILILILVLRPQG 284

Query: 339 LLRLRT 344
           L+  R 
Sbjct: 285 LMGARK 290


>gi|55981300|ref|YP_144597.1| branched-chain amino acid ABC transporter permease [Thermus
           thermophilus HB8]
 gi|55772713|dbj|BAD71154.1| branched-chain amino acid ABC transporter, permease protein
           [Thermus thermophilus HB8]
          Length = 322

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 94/315 (29%), Gaps = 12/315 (3%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
               + +    I   IY M A G ++V G L L++      + IGA + V +       I
Sbjct: 7   VLLPQVLFDGFILGFIYAMIALGYTMVYGVLELINFAHSEIFMIGAVAGVEVFRYLAPLI 66

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
                +  +       + GL ++              +      L+    ++     +  
Sbjct: 67  PNGYLLLLVAVVVGAAVAGLTAILVERMAYRPLRRRGTTNRLVPLVTAIGVSFFLQDLVR 126

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY------VLLGMCFLSASIILWLRRTAI 206
                +       +        SF ++   ++       V++    +   +   + RT +
Sbjct: 127 LIEGLWHNEFFLRMRTIPDLEGSFTLFGGAIFIQTKSVIVIVVSVLMLWGLTYLVNRTKL 186

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A R +  +      +           F +  A  G+AG  FA     I+P +  F   
Sbjct: 187 GMAIRAVAQDLSTASLMGINPDLIISRTFLIGGALGGVAGVLFALIYTTINPYV-GFLPG 245

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I   +  +LGG+ ++        +L  +                            +  +
Sbjct: 246 IKAFTAAVLGGIGNIPGAMLGGLVLGQLENFFGTYLPILTAGNFG-----TEYKDVVAFL 300

Query: 327 ALFLVILMRSHSLLR 341
            L  ++L R   LL 
Sbjct: 301 ILIFILLFRPQGLLG 315


>gi|84685737|ref|ZP_01013634.1| branched-chain amino acid ABC transporter, permease protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84666403|gb|EAQ12876.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 319

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 49/321 (15%), Positives = 107/321 (33%), Gaps = 26/321 (8%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
              ++    +          +   QI I  +    L +VVG  GL +L     Y  GAY 
Sbjct: 10  AAAVIPLAAVALALIFPNQQAFLAQIAITALVVLSLDLVVGFAGLATLGHAAMYGAGAYG 69

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +            + V  +       +  L  ++  G    + T+ +++I   I+ K 
Sbjct: 70  AALYALHVWAEPLTGLIVGGLAGATIAFLSALMLMRSHGLTFLMMTVAITQILYEIVNKS 129

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           + +T G  G+Y       LG               F  Y    ++    + +L   ++  
Sbjct: 130 RAVTGGDDGLYGIVMKPLLGV------------FEFDFYGRLAFWYAAVVLWLVFLLLRH 177

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +  +      R +RD+     +L   I   +++ + +S A  G+AGA  A +   +    
Sbjct: 178 IVASPFGLTVRAVRDDGDRVATLGGNIFGHRVALYTLSGAIAGLAGALSAQTVQVVGLHS 237

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              + +  ++ ++++GG   L        + + +      ++               +R 
Sbjct: 238 LSVTFSADILVMLVMGGAGRLWGGLLGALVFMMIHHYAAEID--------------PVRW 283

Query: 321 TTLMVIALFLVILMRSHSLLR 341
              +   L  ++L     L  
Sbjct: 284 MLFVGAILVAIVLFLPKGLFG 304


>gi|239813653|ref|YP_002942563.1| ABC transporter permease [Variovorax paradoxus S110]
 gi|239800230|gb|ACS17297.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 306

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 96/308 (31%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL++V G +  ++L     + +GAY              L +  
Sbjct: 10  LLNGLGYGLMLFLLAAGLTLVFGVMDTMNLAHGSLFTMGAYIGAT----------LSLYT 59

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            + +    G ++G   L    +   +  L +S     ++     I      +        
Sbjct: 60  GSFVLAVAGAVVGTVLLALALEIALMRRLYVSNHLVQVVATLGVILIVDDVVKATWGAAP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +      +       +S   Y  +   VL+    ++A +   +  T +    R    N+ 
Sbjct: 120 IIAGAPQVFSQPIQITSDWAYPSYRVLVLVAGLAVAALLYALVNHTRLGMLVRAGASNRA 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + +A  G+AGA           +    +  I  + ++++GG+
Sbjct: 180 MAQMMGVRVKQVFSVIFLLGAALAGLAGALMGPL--SAVQNGMGETIMIPALIVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC---SFNMRHTTLMVIALFLVILMR 335
            S+        ++  V  +            +       +        M + +  V+  +
Sbjct: 238 GSVRGALVGALLVGTVETIGRAFAPALLKQFMPPALVADTAPALAGMTMYLLMVAVLFFK 297

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 298 PRGLFPAR 305


>gi|170290442|ref|YP_001737258.1| ABC-type branched-chain amino acid transport system, permease
           component [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174522|gb|ACB07575.1| ABC-type branched-chain amino acid transport system, permease
           component [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 296

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 99/307 (32%), Gaps = 23/307 (7%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            + I S  I   +Y + A GLS++ G +  ++        +G Y+   +    G+   + 
Sbjct: 8   SQLIISYAILGGVYALTALGLSLIWGVMRAVNWAHGDLLMLGMYTAYWMVLLLGMDPLIA 67

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
                +++      +G        + +            + L     I +    ++    
Sbjct: 68  A----IVAFCLLGALGGIIHLIAIEPVIEKPGGHEATLLSTLGISVAIESIALILWSPSP 123

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
             +        +  F   +S      F   ++         +  +++R+ +  A R +  
Sbjct: 124 RSYDNIYKGIYLELFGIRTSLAEAIAFSLSLIAI-----FLVDQFMKRSRLGKAIRAVSQ 178

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N      +   +   +L  F++  A  G+AG   +     I   +  +  +I    +VI 
Sbjct: 179 NPIGARVVGINVSRIRLFTFSLGVALAGVAGVLVSTFYPNI-RPLAGYVWDIASYVVVIF 237

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
            G+ S+  +  +  I+  +  +   M               N     L+     +V+L++
Sbjct: 238 AGLGSIYGVIISGLIIGVLEGIGTVMF-------------TNAFRHILVYSVFLVVLLLK 284

Query: 336 SHSLLRL 342
              L   
Sbjct: 285 PEGLFGR 291


>gi|118471299|ref|YP_891081.1| integral membrane protein of the ABC-type Nat permease for neutral
           amino acids NatD [Mycobacterium smegmatis str. MC2 155]
 gi|118172586|gb|ABK73482.1| integral membrane protein of the ABC-type Nat permease for neutral
           amino acids NatD [Mycobacterium smegmatis str. MC2 155]
          Length = 303

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 103/309 (33%), Gaps = 27/309 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+    +   I  M   G S+V  + G L++      A+ A+  ++    +G+  W   
Sbjct: 18  QYVIFGLVTGSILAMATVGFSMVRQTEGFLNIAHGQFLALAAFLGLMASRDWGVPTWAAA 77

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +A+ +G   +I+ +   +       +  L  S     I+     +T G          
Sbjct: 78  LFAAIATGVAAVILSVVVFEPIRQKGVLVQLFSSVGVAYIIYGLLVMTFGAN-------- 129

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                    +     +    V        +++       ++ L+L +T    + R    N
Sbjct: 130 ----LQHYEVTFGSSYSVMGVQISFGEVAIIVTSAVSILALHLFLTKTPAGISIRAAAGN 185

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                    +  F     + ++    G+AG                +   +++++  +LG
Sbjct: 186 PDLARVRGISTRFVSYQVWFIAGFLAGLAGVMIGIIGSV--GPELGWQNILLILAAAVLG 243

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S   +  A+ +L   ++L   +                   T +  +AL +V+L+R 
Sbjct: 244 GLGSTYGVIMASLLLGLAMDLSALVIP-------------TEYRTVVAFVALIIVLLVRP 290

Query: 337 HSLLRLRTP 345
             L  +R  
Sbjct: 291 SGLFSVRQR 299


>gi|289645254|ref|ZP_06477257.1| ABC transporter related protein [Frankia symbiont of Datisca
           glomerata]
 gi|289504936|gb|EFD26031.1| ABC transporter related protein [Frankia symbiont of Datisca
           glomerata]
          Length = 954

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 103/267 (38%), Gaps = 14/267 (5%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
              L   +    L ++V + G +SL  V   AIGA  +  L   +GL   + + ++ +++
Sbjct: 335 TVALATSIVFLSLGLLVRNCGQVSLCQVSFMAIGAAGFSHLSVDHGLPWLVALLLAGLVA 394

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
              G ++ +P+++  G YLA+AT       Q +      +           R +     +
Sbjct: 395 VPVGAVLAIPAIRLTGLYLALATFGFGIFLQYMFYAQDYMFGPTGAGLDQPRPHLSWLEI 454

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                               Y+++L M  ++A ++  L R  +    R + D+  A  + 
Sbjct: 455 DDDR--------------GYYFLVLAMTVIAAGVLAVLDRGRLGRLLRGLGDSPTALETS 500

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
             T+   ++  F VS+    + GA  A ++  +S D +    ++   +++++    +   
Sbjct: 501 GVTVSVTRVLVFCVSAFMAAVGGALGAVAQSTVSADSYHPLLSLTYFALIVIVLGGNPWY 560

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLL 310
              A   L+ +     G N      L+
Sbjct: 561 ALTAAGALVLIPSYSSGENTATILQLV 587



 Score = 43.3 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 32/290 (11%), Positives = 79/290 (27%), Gaps = 12/290 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            ++ +      +Y +   GL +   + G+ +       A+ AY +  L    G S  +  
Sbjct: 6   PFVVTGLTTGAVYGLAGTGLVLTYKTSGVFNFAHGALAAVAAYLFYSLHIGQGWSWPMAA 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V+ +++G    ++     +          +  +     ++     ++ G   +      
Sbjct: 66  AVAVLLAGPLLGLVLELLARSIQAASLALQVASTVGLLLVIQAVIVLSYGTLELRTVPVF 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G                                 +A + +  R T +  A R + D+
Sbjct: 126 LASG----------DVRLLGTNVRWTDIVTFAFALLTTAGLSVMFRTTRLGTAMRAVVDD 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                    +    +  A+++ +     +G  FA         +          + V   
Sbjct: 176 PALLALTGNSPATTRRFAWSIGATLAAASGVLFAPLLPLDPVQLTLLVVAAFGAAAVGG- 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             T+L         +  +  L          + L     F +    L+V 
Sbjct: 235 -FTNLPLTFAGGLAIGVLASLSTKYFTTGPLAGLPPALPFTVLFVVLLVF 283


>gi|163735015|ref|ZP_02142452.1| branched-chain amino acid transport system permease component,
           putative [Roseobacter litoralis Och 149]
 gi|161391797|gb|EDQ16129.1| branched-chain amino acid transport system permease component,
           putative [Roseobacter litoralis Och 149]
          Length = 308

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 96/301 (31%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   ++V+ A GL+I+ G +G++++       +GAY   +  + +   +  L  +   I
Sbjct: 22  LILFSVFVLMALGLAIIFGQMGVINMAHGEFMILGAYMTYLTSNLFEAYLPGLFSMYFFI 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +             F      +   +       +L  W      +           +G +
Sbjct: 82  AMIIAFFASGLLGLFVEWA--MIRHLYKRPLDTLLATWGLSLILQQLYRSVFGAREVGVS 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +      +  V   I   +V++    +S ++   + R++     R I  N+    +
Sbjct: 140 IPDWMMGSLPLTDLVEIPINGIFVMVLAVTISLAVYYLMFRSSWGLQVRAISQNRVMADA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +     +     F +     G+AG+ F       +         +    +V+ GG  SL 
Sbjct: 200 VGINTAWTDRLTFGIGCGVAGVAGSAFTMIGS--TGPTAGQLYIVDTFLVVVFGGAGSLL 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     +                         L ++ +  ++++R   L  L
Sbjct: 258 GTIASAFSISQAQSIMEFFLSGSMAK-------------VLTLLIVVGILMIRPQGLFTL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|76800741|ref|YP_325749.1| branched-chain/neutral amino acids ABC transporter permease
           [Natronomonas pharaonis DSM 2160]
 gi|76556606|emb|CAI48177.1| ABC-type transport system permease protein I (probable substrates
           branched-chain/neutral amino acids) 5 [Natronomonas
           pharaonis DSM 2160]
          Length = 319

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/326 (13%), Positives = 99/326 (30%), Gaps = 24/326 (7%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
             LF+      +   +      I  M A GL+I+ G LG+L+L     YA+GA+    + 
Sbjct: 4   AALFVSPELFVEQTLNGLFFGFILFMIATGLTIIFGVLGILNLAHGEFYALGAFLVFSIA 63

Query: 86  SRYGLS---------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
             +            I L+  ++ +       I+   S      ++             +
Sbjct: 64  GFFVGFVGDPTDPVSIALVAVLALVGVFVAAAILLPISAFLEAVFVRPIYDRDEVYQLLL 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                 +      +    +   L     ++ +          Y  +  + +L    +   
Sbjct: 124 TYALLLMLVDVLLLVWGGQPQRLEGVFNTVNQIPTTELVGFSYPSYNIFAILLGLCVFGF 183

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++ +  RT      R    N++A  ++  +        FA+   F G AGA   A     
Sbjct: 184 LVWFFERTKTGRIVRATAINREAATAMGVSTDRVFTLVFAMGGFFAGFAGAVHGAGPISA 243

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
              M   +  ++   ++++GG+ S+        ++         +              +
Sbjct: 244 DVGM-GVNPLVLSFVVIVVGGLGSIKGAFVGALLIGVASRWATMI--------------Y 288

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
                      +  V+L+R   L   
Sbjct: 289 PPAELAAPFAIMVAVLLLRPEGLYGT 314


>gi|317133264|ref|YP_004092578.1| inner-membrane translocator [Ethanoligenens harbinense YUAN-3]
 gi|315471243|gb|ADU27847.1| inner-membrane translocator [Ethanoligenens harbinense YUAN-3]
          Length = 285

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 96/302 (31%), Gaps = 29/302 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +   Q  + ++   GL I+ G + ++++       IG +   I+   + L   L I +
Sbjct: 8   MSNGLNQSAVLLIATLGLVIIFGLMKVINMAHGQMIMIGGFCAYIVTGIFSLPFCLAIVI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +++   GM++ +  +K          L    I   +                  R+ +
Sbjct: 68  SFIVTALFGMLIEIVIIKRLYAKPTETILATFAISIIL--------------TEIARMVW 113

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +    +F    V    +  +++L    L    I +   T      R I  N++
Sbjct: 114 PLAVNVKMPLPGKFTLGSVTIPFYNIFLVLIALGLLVCTIYFFACTKTGRKIRAITQNRQ 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L           FA  +   G+AG   A +           +         ++GG 
Sbjct: 174 MTECLGIDTAKIDTLTFAYGAGLAGIAGCVLAPTTGV--SYDMGATYLTNTFLTAVVGGA 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+     L  G +   +                ++  A+ +++  +   
Sbjct: 232 QSMVGTAVASGIIGESRTLLAGFSNDTWA-------------MIMVSFAIIVLVRFKPEG 278

Query: 339 LL 340
           L 
Sbjct: 279 LF 280


>gi|284032181|ref|YP_003382112.1| inner-membrane translocator [Kribbella flavida DSM 17836]
 gi|283811474|gb|ADB33313.1| inner-membrane translocator [Kribbella flavida DSM 17836]
          Length = 432

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/330 (11%), Positives = 100/330 (30%), Gaps = 29/330 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           + +FS  + +   +L  L ++  + +        +   + ++     +  + + G++ V+
Sbjct: 113 LGLFSGGIGRNVGLLVALVLLCIVGVATAGDTFATGANLLTILRAAAVIGVVSVGMTFVI 172

Query: 61  GSLGLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
            + G + L+     A+    A +           +  ++  + ++  ACG++ G+     
Sbjct: 173 -TGGGIDLSVGAILALASVWATTLATQQMALDYGVIFMVSTALLVGAACGLVNGVLVAYG 231

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           +      ATL M    + +                      +      +I    F   F 
Sbjct: 232 KIVPFI-ATLAMLAAARGLA-------------------EIISDRRTQIITVNSFSDVFG 271

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
              I +  ++     ++A   + L RT        +  N +A       +    ++ + +
Sbjct: 272 GSLIGVPVLVWMFVLVAALGWVLLNRTTFGRRTFAVGGNAEAARLAGIKVQRHTVALYVL 331

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILI 292
                G+A     A     +       E   + ++VI      GG  ++        I  
Sbjct: 332 LGVCCGIAAVMLMARTTTGTSTHGVLYELDAIAAVVIGGTLLSGGRGTIVGTVFGVLIFT 391

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            +  +    N       +       +    
Sbjct: 392 TLNNVFTLNNLSLSAQSVAKGLIIVIAVLL 421


>gi|148270731|ref|YP_001245191.1| inner-membrane translocator [Thermotoga petrophila RKU-1]
 gi|147736275|gb|ABQ47615.1| inner-membrane translocator [Thermotoga petrophila RKU-1]
          Length = 299

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 87/291 (29%), Gaps = 7/291 (2%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
               + + +  +   +Y + A G ++V G L L++        +G Y      +   L+ 
Sbjct: 2   VFFLQNLFNGIMLGGLYALIAIGYTMVYGILRLINFAHGDVMMMGVYFAFYAATLLSLNP 61

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
                V+ + +   G ++   + K   +   I+ LI +      L     +  G      
Sbjct: 62  LFSAIVAILGAAVLGFLIDRVAYKPLRNAPRISALITAIGVSFFLESLAVVVFGAI---- 117

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                FL       I       +     +  + V+     +   +   + RT I  A R 
Sbjct: 118 --PKSFLNVFKDRTILNKVLTLAGARIPLLTFLVIFITIVILIVLFFIVYRTKIGMAMRA 175

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  +      +   +       FA+ SA    +G  +A     + P M  F   +     
Sbjct: 176 ISMDIPTTALMGVNVDAVIGFTFALGSALAAASGIMWAMRFPNVHPYM-GFMPGLKAFIA 234

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            + GG+ S+        +L  +                 F     +    +
Sbjct: 235 AVFGGIGSIPGAVLGGVLLGLIEIFLAAYFPAVMGYRDAFAFIILIIILLV 285


>gi|317401950|gb|EFV82553.1| ABC transporter [Achromobacter xylosoxidans C54]
          Length = 295

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 109/303 (35%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +    Y M + GL+++ G L +++      Y +GA+   +  S  GL+ W+++ +
Sbjct: 16  LLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMLGAFLAWMGLSYLGLNYWVMLIL 75

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  G+I+    LK       +  L+++     ++        G +G         
Sbjct: 76  APLVVGLFGIIIEKLLLKHLYKLDHLYGLLLTFGLTLLIEGLFRSFYGVSGQPYPTPDAL 135

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G T             F++   +  +V+     +  +    + RT +    R   +N +
Sbjct: 136 RGAT----------NLGFMVLPNYRGWVVAASVVVCLATWFVIERTRLGALLRAGTENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +    A  G AG   A         +   +  I+V ++V++GGM
Sbjct: 186 LVEAFGVNVPRMITLTYGFGVALAGFAGVLAAPVLQI--SPLMGSNLIIVVFAVVVIGGM 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L  +  L                  +    +T++ I + +V+L+R   
Sbjct: 244 GSIMGAIVTGLGLGVIEGLTKVF--------------WPEASSTVVFIIMAIVLLLRPAG 289

Query: 339 LLR 341
           L  
Sbjct: 290 LFG 292


>gi|170749307|ref|YP_001755567.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
 gi|170655829|gb|ACB24884.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
          Length = 291

 Score = 65.7 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 101/304 (33%), Gaps = 28/304 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +  + Y++ A GLS++    G+++L     YAIGAY  V+L     +     +  
Sbjct: 10  VLNGLLIGVQYLLIALGLSLIFSLGGIVNLAHGAFYAIGAYMTVLLT--PTIGFGGALVA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +     G+++    L+          L+++     +  +   +  G A +      + 
Sbjct: 68  SPLAVAVLGLLIERFLLRRFYRGDPTLGLLLTFGLAMVAEQALRMAFGAAPVPFGIPPWL 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                +IY  +   +L+      A + L L RT+     R    N  
Sbjct: 128 RGQVF----------IGDLIYSRYRLSILVVALACVAGLWLLLTRTSFGRVVRAGVQNPD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L  ++     +   ++     +AG   A                     +V++GG+
Sbjct: 178 MVAALGISLRPYMTAVVTIAVGLAALAGTMMAPVTGV--QPAMGAEILTFAFVVVVIGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S   +  A  I+  V  L                 ++       +   + LV+L+R   
Sbjct: 236 GSFWGVVLAALIVGVVRGLT--------------AYAYPPATEAAVYALMVLVLLLRPRG 281

Query: 339 LLRL 342
           L   
Sbjct: 282 LFGE 285


>gi|91780884|ref|YP_556091.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693544|gb|ABE36741.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 288

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 95/303 (31%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   I+ + A GL+++ G + +++        +G Y+  +L S   +  +L   +
Sbjct: 9   VIDGLLNAGIFGLAAVGLTLLFGVMRVVNFAHGDLLMVGMYATYVLYSAGHIHPYLSAVI 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                   G+ M    L+        A L+++     +L        G     +   +  
Sbjct: 69  VVPALALLGVAMYRFLLRPLSGAPEHAQLLVTLGLSMVLQNVVLSLFGADFRSINVPVSN 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        F    ++      Y  +       ++ L+LR T      R    ++ 
Sbjct: 129 -----------EAFELGAIVLPAARLYGFVVGMGACIALYLFLRYTDFGVITRAAVQDRT 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A       +    + + A++   +G+A A+        S     +        IVILGGM
Sbjct: 178 AAALAGIDVERVLVISTAIAVGLLGLAAAWLVPMVYLSSEVGHTYLLPS--FIIVILGGM 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+      + +      L   +       L+               I    ++L+R   
Sbjct: 236 GSVRGAILGSIVYGLSQSLGAVLVPGSLGILVPL-------------ITFVALLLVRPSG 282

Query: 339 LLR 341
           L R
Sbjct: 283 LFR 285


>gi|332524765|ref|ZP_08400962.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2]
 gi|332108071|gb|EGJ09295.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2]
          Length = 294

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 111/315 (35%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L +        +    +    Y M + GL+++ G LG+++      Y +GAY   +   
Sbjct: 3   ILGIPLQAFLGQLMLGLVNGSFYAMLSLGLAVIFGLLGIVNFAHGALYMLGAYVAWLSLE 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
           ++GL+ W  + ++ ++ GA G+++    LK       I  L+++     I         G
Sbjct: 63  KFGLNYWAALVLAPLVVGALGIVIERSLLKRLYKVDPIYGLLLTFGLALIAEGVLRDQYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F+I   +  +V++    +       + RT +
Sbjct: 123 VSGQSYPVPEALQGAT----------DLGFMILPNYRAWVIVASLTVCFGTWFVIERTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
            +  R   +N     +    +       +A  +    +AG   A         +   +  
Sbjct: 173 GSYLRAGTENPSLVQAFGVNVPAMVALTYAAGAGLAALAGVLAAPVIQI--TPLMGANLI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+        +L  V  L                  +      ++ +
Sbjct: 231 IVVFAVVVIGGMGSILGSILTGLVLGVVEGLTKVF--------------YPEASNIVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + +V+++R   L  
Sbjct: 277 IMAIVLMLRPAGLFG 291


>gi|116249109|ref|YP_764950.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253759|emb|CAK12153.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 297

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/295 (17%), Positives = 98/295 (33%), Gaps = 16/295 (5%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+I  G++G++++       IGAY  V+ G     S+ L IP++ +++   G+++ 
Sbjct: 18  VALGLAITYGAMGVINMAHGEMVMIGAYVAVLSGIWLKASLLLAIPLAFVVTALLGLLIE 77

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
              ++     L    L    I   +    +            + L      V        
Sbjct: 78  RVVVRRLYGRLLDTLLATWGIAILLQQAVRLEFGLSFFGIHVEGLGAGLQNVPVPAYLQG 137

Query: 172 -FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
            F  +      +  +++     L+ +    L RTA     R I  N K   +    +   
Sbjct: 138 TFRLAGADINAYRTFIIAVTAALTLATWFILYRTAAGMQVRAIIRNPKMAAACGIDVKRV 197

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
               FA  S   G+AG   +  +            +     +V+ GG+ SL     ++ +
Sbjct: 198 NAMTFAFGSGLAGVAGVMMSGFKTVFPDMGTTMVVDG--FMVVVTGGVGSLFGTILSSGL 255

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           L  +  L            + F               + LVIL++   L   +  
Sbjct: 256 LGEINALVAIGTNDILARAVVFG-------------VVILVILVKPSGLFSFKGR 297


>gi|119386284|ref|YP_917339.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119376879|gb|ABL71643.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 291

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 106/305 (34%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    Y++ A GLS++    G+++L     + +GAY  ++L     +  +  + V
Sbjct: 9   LLNGLLDGFYYMLIALGLSLIFSLGGIVNLAHGAFFTLGAYLALVLT--PHIGFFGALIV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +I+    M++             + +L+++     I+ +      G +    +     
Sbjct: 67  GPLIAAGVAMVVERTLFTRFYREDPLYSLLLTFGLAMIIEQSLRWYFGASPRAYSMPNEL 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                 +Y  + ++++       A++ + L RTA     R    N  
Sbjct: 127 RGQVFMGDF----------VYSRYRFFLIGIAVATVAAVWVLLNRTAFGRIVRAGIQNPD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L  ++     +  A++ A   +AG   A  +      M           +V++GG+
Sbjct: 177 ILGTLGISLRPYLSAVVAIAIAIAALAGVLMAPLQPV--HPMMGVEVGTAAFVVVVIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S   +  A  ++  V  L                  +       + + +F+V+ +R   
Sbjct: 235 GSFWGVVVAALLVGLVKGLM-------------IGIGYTQYSMLAIYLLMFVVLFLRPRG 281

Query: 339 LLRLR 343
           L   R
Sbjct: 282 LFGER 286


>gi|311106317|ref|YP_003979170.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310761006|gb|ADP16455.1| inner-membrane translocator 38 [Achromobacter xylosoxidans A8]
          Length = 287

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 93/304 (30%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A GL++V G L +++L       +GAY+   L +  G+  +L +P+
Sbjct: 8   LVNGILLGGLYAVMAQGLALVWGVLNIVNLAHGAFIMLGAYASWYLYNDAGVDPFLGLPL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A      G  +    L          TL+++   + +L     +        +      
Sbjct: 68  TAAAMFLLGYALQRGLLNLVVRAPMFNTLLITFGLEVVLTYLAQLAFSADFRTINPP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        +    V   +           ++  + L+L  + +  A R    N  
Sbjct: 125 --------YAGDSYALGPVTLPMARLAAFGVALAITLGMWLFLLHSRLGRAIRATAQNLV 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A               F +  A  G AG  +              +      +I I+GG+
Sbjct: 177 AARLYGVEPRHLYAVTFGLGLALAGAAGGLYGTVSQI--NPYIGATLTAKCFAISIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +   +      L  V  L        +  +  F               L LV+L +   
Sbjct: 235 DNPLGVMVGGLFLGIVESLTTLYVGPTYADVASFG-------------ILVLVLLAKPSG 281

Query: 339 LLRL 342
           LL  
Sbjct: 282 LLGR 285


>gi|167572105|ref|ZP_02364979.1| sugar ABC transporter, permease protein [Burkholderia oklahomensis
           C6786]
          Length = 329

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/314 (11%), Positives = 88/314 (28%), Gaps = 29/314 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ VV  ++L        + +    +  Q  I  + A G++ V+     + L+     
Sbjct: 31  IPIIFVVLCIVLAFASPYFLTWRNWSDILRQTSINGILAIGMTYVI-LTKGIDLSVGSVL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      + G+            +++  G                   +   + +    
Sbjct: 90  ALAGIVSGLAGAA------GHGLAASLAVGVACGAALGAINGVTIARFNVPPFVATLGML 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           +I      I N  + +                     + S  +     +   +L    ++
Sbjct: 144 SIARGVTYIVNDGSPVANLP---------------DDYLSLGIGKLGPLGMPVLIFAAVA 188

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    LR T        +  N+K+  +    +     S + VS A  G+AG   AA   
Sbjct: 189 LACWWVLRYTTYGRYLYAVGGNEKSARTSGIGVRKVVFSVYVVSGALAGLAGMILAARTT 248

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                    S  +  I+ V++GG         +        ++  +      +    +  
Sbjct: 249 SA-LPQAGVSYELDAIAAVVIGGTSLSGGQGGVVGTLFGALLIGVINNGLNLLGVSSYYQ 307

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 308 QIAKGLIIVLAVLI 321


>gi|315425210|dbj|BAJ46879.1| branched-chain amino acid transport system permease protein
           [Candidatus Caldiarchaeum subterraneum]
          Length = 315

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 58/312 (18%), Positives = 107/312 (34%), Gaps = 35/312 (11%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
             L        + +     L  +     L+ + G  G ++   +  Y +GAY+   L + 
Sbjct: 22  ASLPPLTGNTALIAYFWSFLQMLALVMSLNFITGFTGYVNFGHIAYYGVGAYTVAYLTTT 81

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             +  ++ +P +A+ S A   ++G P L+ RG Y AI TL + E  + I++         
Sbjct: 82  TRVDPYVFVPAAAITSAAVAYLIGRPILRIRGPYFAITTLGLGEAVRVIIVNIPAF---- 137

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                            +        + F       Y  +         + L+LRRT   
Sbjct: 138 -----------------NYSEGLPIAAYFTYNVTGSYIAMYTTVATLFILTLYLRRTRFG 180

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
               +IR+++ A  S+      AKL+A+ +SSA  G+ G   A +     P  F  + N+
Sbjct: 181 YMLESIREDEDAAESMGINTAKAKLAAYVLSSACAGVIGGLTAITHVYAHPGFFSITLNV 240

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            V++ ++                  G +         +F         F   H  +    
Sbjct: 241 SVLASLL--------------MGGGGTLLGPLVGAGLFFFISDALLIRFPYLHLVIFGAV 286

Query: 328 LFLVILMRSHSL 339
           +  V L     L
Sbjct: 287 VMTVTLAMPRGL 298


>gi|302528126|ref|ZP_07280468.1| inner-membrane translocator [Streptomyces sp. AA4]
 gi|302437021|gb|EFL08837.1| inner-membrane translocator [Streptomyces sp. AA4]
          Length = 339

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 86/313 (27%), Gaps = 20/313 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
                      IY + A G ++V G L L++      +  GA++        G       
Sbjct: 33  DNTIDGLSYGSIYALVALGYTLVYGVLKLINFAHSEVFIYGAFATWFTFYGLGFRPGATP 92

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN-------ILIKWKPITNGKAG 149
            +         ++  + S+   G    +   +     +         LI     +     
Sbjct: 93  DLPIFELIGFLLLALIASMAVSGGTAVVLERVAYRPLRKRKAPRLVFLITAIGASFVLQQ 152

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           I    R      ++R L     F        I     ++    L     +++ RT     
Sbjct: 153 ILFIWRGGNPENSIRLLRNDEVFTIFGGSVTIVTIITVVASILLMIGTDMFVNRTKFGRG 212

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R +  +      +           F +     G A  F+     + +     F   I  
Sbjct: 213 IRAVAQDPDTATLMGVNKERVITLTFLIGGLLAGAAALFYMMKIPQGASYQGGFILGIKA 272

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  +LGG+ +L        +L  V      +    +  ++ F               L 
Sbjct: 273 FTAAVLGGIGNLRGALLGGLLLGVVENYGQSLFGGAWRDVVAF-------------ALLV 319

Query: 330 LVILMRSHSLLRL 342
           L+++ R   +L  
Sbjct: 320 LILMFRPTGILGE 332


>gi|254720185|ref|ZP_05181996.1| hypothetical protein Bru83_11733 [Brucella sp. 83/13]
 gi|265985191|ref|ZP_06097926.1| inner-membrane translocator [Brucella sp. 83/13]
 gi|306838675|ref|ZP_07471511.1| inner-membrane translocator [Brucella sp. NF 2653]
 gi|264663783|gb|EEZ34044.1| inner-membrane translocator [Brucella sp. 83/13]
 gi|306406318|gb|EFM62561.1| inner-membrane translocator [Brucella sp. NF 2653]
          Length = 295

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 54/318 (16%), Positives = 115/318 (36%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           +++   +        +    I    Y M + GL+I+ G L +++      Y +GA+   +
Sbjct: 1   MVMIFGIPLQALLGQLLVGLINGSFYAMLSLGLAIIFGLLRIINFAHGAQYMLGAFVGYL 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L S  G+S W  + ++ +I G  G I+   +L    +  ++  L+ +     ++      
Sbjct: 61  LLSWLGISYWPALILAPLIVGLGGAIIERVALSRLYNLDSLYGLLFTFGLALVIEGTFRY 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G AG   A      G               F+    +  +V++   F+     L + +
Sbjct: 121 YYGAAGQPYAVPPSLAG----------GRNLGFMFLPNYRAWVVVASLFVCLGTWLLIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N     +    +       +A+ SA  G+AG   A         +   
Sbjct: 171 TKLGAYLRAATENPTLVKAFGINVPLLLTFTYALGSALAGLAGIMAAPIYQV--SPLMGS 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  I+V ++V++GGM S+        +L     L                  +    + +
Sbjct: 229 NIIIVVFAVVVVGGMGSILGAIITGYVLGIAEGLTKVF--------------YPEASSIV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           + + + +V+L+R   L  
Sbjct: 275 VFVIMAIVLLVRPAGLFG 292


>gi|222102484|ref|YP_002539523.1| ABC transporter nucleotide binding/ATPase protein [Agrobacterium
           vitis S4]
 gi|221739085|gb|ACM39818.1| ABC transporter nucleotide binding/ATPase protein [Agrobacterium
           vitis S4]
          Length = 319

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 126/325 (38%), Gaps = 30/325 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A+V  +    F  +      +  +  + L+ +  A   +++ G  G++S+       +G
Sbjct: 8   MALVAVIGSVAFFASGYIDPGLLYLLSEALLLLFMAQMWNLLAGYGGMVSMGHQAFVGLG 67

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY +  L +   L +   +PV+A+  G   + +GL   + R  Y ++A  +++EI   + 
Sbjct: 68  AYLFFALANFGVLPVGAALPVAALAVGLMALPLGLLLFRLRNAYFSVAIWVVAEILVILF 127

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            K+  +                      +       +  +  E +++ + L  C      
Sbjct: 128 SKFSALGG-----------------TGGMTLRPDGGNLDLPLEQYVFAIALFSCVGFTLA 170

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           + W+       A   +RDN+ A  +    +    L+ FA+S+A    AG+ + A+   ++
Sbjct: 171 MRWVLARPTGLAILAVRDNEDAAQAAGVNVQKLHLALFAISAAGCAWAGSLYYANVLYLT 230

Query: 258 PDMFKFSENII-VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P        +I ++ I ++GG+ +L+     T I IG+ E      F             
Sbjct: 231 PTDAFQINWVIGMMFIAVVGGIGTLTGPVIGTVIFIGLREFLTSFGFS------------ 278

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
              +  +M + + + ++     L  
Sbjct: 279 GSIYWIVMGLIVIVTLVYAPRGLWP 303


>gi|332977470|gb|EGK14244.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Desmospora sp. 8437]
          Length = 325

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 90/314 (28%), Gaps = 27/314 (8%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
              L  ++   +L +      S + I S+ +Q  I  + A G + V+ S G + L+    
Sbjct: 26  YALLGLILLSGVLSVMSPHFPSFQNILSISLQTAIIAILALGQTYVIISAG-IDLSVGSV 84

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            A+       L       +  LI           +                  L +++  
Sbjct: 85  LALSGVISSQLLVEGVPVLPALIIGIVSGGILGLI----------------NGLAITKGN 128

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
               I    +     GI +        + +            F I    ++ +++ +   
Sbjct: 129 LPPFIVTLGMMGVARGIALVLTNGLPVSGLPDAFTRLGNDRLFYIPIPVLFLIVVAVVGH 188

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
                   RRT        I  N++A           K   + +   F G+AG   +A  
Sbjct: 189 FVL-----RRTVFGRYVYAIGSNEEAARLSGIPTALHKTMIYTLCGMFAGLAGVLLSARL 243

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
               P      E   + ++VI     +GG+ S+        I+  +      ++   F  
Sbjct: 244 ISAQPTAGTGYELDAIAAVVIGGASLMGGVGSIGGTVIGAFIMGVLRNGLNLLSVSPFWQ 303

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 304 QIAIGLVIVLAVYL 317


>gi|329114865|ref|ZP_08243621.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Acetobacter pomorum DM001]
 gi|326695762|gb|EGE47447.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Acetobacter pomorum DM001]
          Length = 321

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 95/301 (31%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   ++++ A GL+IV G +G++++       +GAY+  +    +      L  +   +
Sbjct: 35  LILFSVFLLMALGLAIVFGQMGVINMAHGEFMILGAYTTYVCSYVFAQWAPALFGLYFFV 94

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     I+   S  F    L     +       +L  W      +           +G T
Sbjct: 95  AVVLAFIVAGISGMFLEWLL--IRFLYKRPLDTLLATWGVSLILQQVFRSTFGAREVGVT 152

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +      S  +   I    V+     ++ +I   L ++      R +  N+    +
Sbjct: 153 LPDWMMGSWNLSDTIQIPINGMIVIAITFLITGAIYALLYKSGWGKQVRAVMQNRTMAGN 212

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           F +     G+AG+ F       +         +    +V  GG  SL 
Sbjct: 213 VGINTERVDRFTFGLGCGVAGVAGSAFTMIGS--TSPTAGQQYIVDTFLVVAFGGTESLG 270

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               ++  +     +                         L+++ +  ++++R   L  L
Sbjct: 271 GTIASSFSISQARSILEFFLN-------------GSMAQVLVLLTVIGILMLRPQGLFAL 317

Query: 343 R 343
           +
Sbjct: 318 K 318


>gi|163793937|ref|ZP_02187911.1| probable high-affinity branched-chain amino acid transport permease
           protein [alpha proteobacterium BAL199]
 gi|159181048|gb|EDP65565.1| probable high-affinity branched-chain amino acid transport permease
           protein [alpha proteobacterium BAL199]
          Length = 351

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/318 (15%), Positives = 98/318 (30%), Gaps = 9/318 (2%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
            +V   L+ F          Y   + +  L+ V+ A    +  G +G  SL  VI + +G
Sbjct: 8   FSVYAVLIAFALAAPFVFPNYTSQVAVMWLM-VLMAVTWDMTGGQMGYNSLGNVIFFGLG 66

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y+  ++       +         I            L        + + I + I    +
Sbjct: 67  MYASAVVQIGLVYDVAEYTSAFGAIVVDFNDTQYFTGLVLGIVAGGVVSTIFAIIVGPFM 126

Query: 138 IKWKPITN-----GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           +  +         G A         +        I    +P       +  Y +L  +  
Sbjct: 127 LGLRGPYFAIGTLGLAVAVAELVSGWEYVGGGGGISMPVYPGIAGEGSLVWYILLGLLAL 186

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +     WL  T    A   IRD++    ++       K+  +  S+ F+GM GA F   
Sbjct: 187 SAHLFCRWLYSTQFGLAINAIRDDEDKAEAMGIQTTRYKVVTWVASAFFMGMGGAVFGNM 246

Query: 253 RDRISP---DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              I P        +  I ++++ ++GG  +L        +   V E        +    
Sbjct: 247 SGFIEPLEVAFPTTTFGIFMVAMALVGGKGTLWGPVLGAILFHVVKEWTWTYLLGWQWVA 306

Query: 310 LKFDCSFNMRHTTLMVIA 327
           L      N+ +    ++ 
Sbjct: 307 LGAIIIINVVYFQQGILG 324


>gi|114707739|ref|ZP_01440633.1| hypothetical protein FP2506_17319 [Fulvimarina pelagi HTCC2506]
 gi|114536728|gb|EAU39858.1| hypothetical protein FP2506_17319 [Fulvimarina pelagi HTCC2506]
          Length = 291

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 95/285 (33%), Gaps = 13/285 (4%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                I +M A GL+I+ GS+G+++L       +GAY+   L + +GL + + +P+  + 
Sbjct: 14  LSTASILLMIAAGLAIIYGSMGVINLAHGEFVMLGAYATWALQTFFGLGMLISLPLVFVA 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
            GA G ++    +    +      L    +   +          ++       ++     
Sbjct: 74  IGAVGWLIEKGIVSRLYNRPLDTILATWGVGIVLQQAITLGIGSQSRFVQRPEIFDGNLF 133

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                         ++   +  ++L     +     L L RT      R +  N++    
Sbjct: 134 F-----------GDLVISNYRLFILGVSLGMLLVTYLLLTRTEFGTKLRAVIQNREISEC 182

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA  +A  G+AGA         +      +  +    +VI+GG+ SL 
Sbjct: 183 YGIRAERVYGLTFAYGAALAGIAGALVTPLIS--TTPTMGTTLVVDAFLVVIVGGVGSLV 240

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             A A+ ++     +   +       +L       +       + 
Sbjct: 241 GTALASGLIGEASAMLSMIFNDTTGRILLLVAIILLIRFRPTGLI 285


>gi|2661836|emb|CAA75187.1| putative transport protein [Methylophilus methylotrophus]
          Length = 305

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/301 (10%), Positives = 92/301 (30%), Gaps = 19/301 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++ A GL+I+ G +G++++       IGAY+ V++        +        I
Sbjct: 21  LSMFTVLLLMALGLAIIFGQMGVINMAHGEFMTIGAYTTVLISKVAASYGFTDYYFVFAI 80

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           + A  +   +           +   +       +L  W      +     +     +   
Sbjct: 81  AIAFLLAFAVGY----FVEFIMIRHLYKRPLDTLLATWGLNLVMQQIFRSSFGAKEVSAE 136

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P+  +   I   +V++    ++  + +++ ++      R    N+    +
Sbjct: 137 LPEWMLGSFKPTPDIDIPINGVFVMVLAALVTFGVYMFMYKSRWGLRVRATVQNRTMAGA 196

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           FA+     G+AGA F       +         +    +V+ GG  S+ 
Sbjct: 197 VGINTAKVDRVTFALGCGIAGIAGAAFTTIAS--TGPTTGTLYIVDSFMVVVFGGAASIV 254

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     +           +                + +  +++M+   L   
Sbjct: 255 GTIASAFGIAQAQSILQFFMTSSMGKVSTL-------------LVIVTILMMKPEGLFAS 301

Query: 343 R 343
           +
Sbjct: 302 K 302


>gi|160941678|ref|ZP_02089005.1| hypothetical protein CLOBOL_06574 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435175|gb|EDP12942.1| hypothetical protein CLOBOL_06574 [Clostridium bolteae ATCC
           BAA-613]
          Length = 288

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 93/305 (30%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     +IY + A G+ ++  S+G+++         G Y          L I L + +
Sbjct: 6   LVAGVSMGIIYGLIAIGMVLIFRSVGVMNFAQGEFLMFGGYFCYTFNKILNLPIVLSLVL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +++  G  G++    S        A A ++ +     +  +   +  G            
Sbjct: 66  ASLSMGVVGILFMRTSYWPLRSAQAKAIIVSAMGASIVFKEGARLIWGS----------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +            +     ++     + A + + L +T + N  +    +Q 
Sbjct: 115 -IPVTMDRVIQGTAHLGQATIQWQNVAIIAISAIIMALVYMLLEKTFVGNIMQATAQDQY 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   +I +    FA+S+   G+ G   A        +    +      + +++GG 
Sbjct: 174 MASLTGVPVIVSIGLTFALSAMITGIGGGLLAP--IFFLNNTMGATAGAKAFAAIVIGGF 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  V                      +     L+ + L  V++ R   
Sbjct: 232 GSVPGAVLGGLIVGLVEAFGGAYIS-------------STYQLVLIYVVLIAVLMFRPQG 278

Query: 339 LLRLR 343
           +   +
Sbjct: 279 IFGEK 283


>gi|91762895|ref|ZP_01264860.1| Branched-chain amino acid transport system/permease component
           [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718697|gb|EAS85347.1| Branched-chain amino acid transport system/permease component
           [Candidatus Pelagibacter ubique HTCC1002]
          Length = 336

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/334 (8%), Positives = 87/334 (26%), Gaps = 19/334 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           FL                      + A  ++++ G L   +       A G    ++   
Sbjct: 3   FLNAIILLLNYIFMPALTYGSQLALGAIFVTLIYGILRFANFATGDMMAFGTMVTILFTW 62

Query: 87  RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            +              L IP + +++    +++     ++     +    +       + 
Sbjct: 63  YFQSLGISLGVLPTALLAIPFAIVLTIGYMLLIDKFVFRYYRVSKSPPVQLAMVSIGVMF 122

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +    +                        +     +  +  +      +     L + +
Sbjct: 123 VTQAVVRIIIGPSDQRFFDGEKFIIKAGEFKEMTGLNEGLAIKSSQVLTIFVTIVLVSIL 182

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L +T    + R   DN+              +  + ++     + GA +   +    
Sbjct: 183 FWFLNKTKTGKSMRAYSDNEDLALLSGIDPKRVVMITWIIAGILATIGGALYGLDKSF-- 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK------ 311
                F+  + + +  I+GG+ +         ++             +F  +L       
Sbjct: 241 KPFTYFNNMLPIFAAAIVGGIGNPFGAFLGGYVIAFSEIFLTYAYKKFFMYVLPASMEPE 300

Query: 312 --FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                        +    L +V+L R + + + +
Sbjct: 301 TLVQLLSTDYKFAVSFSILVIVLLYRPNGIFKGK 334


>gi|146341489|ref|YP_001206537.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. ORS278]
 gi|146194295|emb|CAL78317.1| putative branched-chain amino acid ABC transporter, permease
           protein [Bradyrhizobium sp. ORS278]
          Length = 290

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 104/307 (33%), Gaps = 27/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      + V+ A GL+IV G LG+++      + IGAY+  +  +    S W  + +
Sbjct: 10  LFSGIALAAVLVITALGLTIVFGMLGVVNFAHGALFMIGAYA-GLYLASLTGSFWWGLVL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ GA GM++    ++          L+++     IL++   I  G  GI        
Sbjct: 69  APVLVGAFGMLIEFLLVRRLYGRSIDDPLLLTFGLSYILVEGVRIVFGSDGIPFPTPPQL 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G                  +  +  +V+  +  +   + L L +T I    R    + +
Sbjct: 129 IGV----------VDLGVGFFPKYRLFVIALVGVVLLLLWLMLEKTRIGLIVRAGARDPQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   I    L+ F +      + G      R                  + ++GG+
Sbjct: 179 IMRVLGVDIGKVWLAIFGLGVGLAALGGVLAGPMRSV--NPEMGTLVLAEAFVVTVIGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++   + +                       T +M   +  V+L+R   
Sbjct: 237 GSIIGAVVAGLMVGICISMVALFA--------------PEMATIVMFALMAAVLLVRPQG 282

Query: 339 LLRLRTP 345
           L  ++  
Sbjct: 283 LFGVKGR 289


>gi|56751621|ref|YP_172322.1| branched-chain amino acid transport system permease [Synechococcus
           elongatus PCC 6301]
 gi|81301303|ref|YP_401511.1| putative branched-chain amino acid ABC transporter, permease
           protein [Synechococcus elongatus PCC 7942]
 gi|25019683|gb|AAN71769.1| unknown [Synechococcus elongatus PCC 7942]
 gi|56686580|dbj|BAD79802.1| branched-chain amino acid transport system permease protein
           [Synechococcus elongatus PCC 6301]
 gi|81170184|gb|ABB58524.1| putative branched-chain amino acid ABC transporter, permease
           protein [Synechococcus elongatus PCC 7942]
          Length = 307

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 57/318 (17%), Positives = 117/318 (36%), Gaps = 31/318 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS--------RYGLSIW 93
           + + +L+       + + +   G LSL     YA+G Y   IL +            ++ 
Sbjct: 11  LLVSMLLGATLGLSVYLPL-MAGQLSLASPAFYALGGYLAAILSTKGLTASPEYSVGALL 69

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L + ++A+ +     ++G P L+ RG YLAIAT+ + EI + + +    IT G  GI+  
Sbjct: 70  LEMGLAAIAAAVLAFLVGYPVLRLRGIYLAIATIALVEIVRVVALNL-SITGGAVGIFGI 128

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            + +                       +   ++ L +  ++ +    L++         I
Sbjct: 129 PQPF--------------------SSAVGYLWIALPLLLIAVAACWRLQQVRTGLVLAAI 168

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R+++ A  ++       K+ AF + +    + GA  A   +  +P    F  +I  ++ V
Sbjct: 169 REDELAASAIAVNTTRYKVLAFVLGAVLASLVGAVSAHFLNTWNPRQGTFDASITFLAFV 228

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ++GG  S         +L  + EL   +                     +  + L L  +
Sbjct: 229 LIGGSRSAFGPVLGGMVLTALPELLRAI-GSVPGLWPGLSRLLQDGRLLIFGLLLVLGSI 287

Query: 334 MRSHSLLRLRTPSNFLER 351
                L++ R       R
Sbjct: 288 YFPQGLIKPRASQPRRRR 305


>gi|239629362|ref|ZP_04672393.1| ribose/xylose/arabinose/galactoside ABC-type transport system
           protein [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239528048|gb|EEQ67049.1| ribose/xylose/arabinose/galactoside ABC-type transport system
           protein [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 340

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 81/300 (27%), Gaps = 23/300 (7%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      S   + ++  Q+ I  + A+G++ V+   G + L+     A+       + + 
Sbjct: 37  IMSPTFVSPANLLNLLRQVSINAVIAFGMTFVI-LTGGIDLSVGSILALSGAVTASMLAS 95

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
              +   L+    + +    +   L +      Y   A  I +     I      +    
Sbjct: 96  GFAAPLALLAGLVLGAIFGLLNGILIA------YGKAAPFIATLATMTIFRGATYVFTNG 149

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
             I  A                F  P             ++ M      + + L +T+  
Sbjct: 150 NPITGAKMNSSFLFQFMGRGYLFGIPFP-----------IIIMLVAYGVLFVLLHKTSFG 198

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N+ A            +  + +S     +AG    +      PD     E  
Sbjct: 199 RKTYALGGNETAARIAGVRTKMVTMLIYTISGLMAAIAGIILTSRLSSAQPDAGTSYEMD 258

Query: 268 IVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V     + GG   +        I+  +      +    F   +       +    
Sbjct: 259 AIAAVVLGGTSLAGGKGRIFGTLIGALIIGTLNNGMNLLGISSFYQQIVKGIVILIAVLL 318


>gi|319951292|ref|ZP_08025127.1| branched-chain amino acid ABC transporter integral membrane subunit
           [Dietzia cinnamea P4]
 gi|319435065|gb|EFV90350.1| branched-chain amino acid ABC transporter integral membrane subunit
           [Dietzia cinnamea P4]
          Length = 294

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 87/290 (30%), Gaps = 25/290 (8%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW-LLIPVSAMISGACGMIMGLPSLKF 117
             G +G++++        G Y+  ++      S   L + +         + + L     
Sbjct: 28  TFGQMGVINMAHGEFIMAGCYTAYVVQQIMAASGAGLALSLVLGFVVGGLLGVLLEVTLI 87

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           R  Y      ++      ++++        A     +   FL                  
Sbjct: 88  RRLYARPLDTLLVTFGVGLVLQQIARDIWGAPAVNVEVPEFLRG---------SVELLGA 138

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
              +   ++ +      A+++  ++ T +    R +  N+    S   +     ++ F +
Sbjct: 139 SVPLTRVFIFVLAIACVAAVMAAMKFTPMGRRIRAVTLNRDLAESSGISSRRTDITTFFI 198

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+AG   A +    +      S  I    +V++GG+  L     A   L  +   
Sbjct: 199 GSGLAGVAGV--ALTLIGSTSPTIGQSYLIDAFLVVVVGGLGQLRGAVIAAFALGVLHSF 256

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                            +       L+ + +   + +R   L  ++T S 
Sbjct: 257 FEY-------------STTASVAKVLVFVTIIFFLQVRPQGLFAVKTRSL 293


>gi|83719683|ref|YP_443820.1| branched-chain amino acid ABC transporter permease [Burkholderia
           thailandensis E264]
 gi|167582853|ref|ZP_02375727.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis TXDOH]
 gi|167620994|ref|ZP_02389625.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis Bt4]
 gi|83653508|gb|ABC37571.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis E264]
          Length = 294

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/318 (12%), Positives = 103/318 (32%), Gaps = 26/318 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +  +     +    +    Y + + GL+++ G L +++      + +GA    +   
Sbjct: 3   IFGIPMSAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGLD 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL  W ++ ++ ++ G  G+++    L++      +  L+++     ++        G
Sbjct: 63  YLGLPYWAMLVLAPVVVGLFGILIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRAIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G                 +        F+    +  +V++    +  +    + +T +
Sbjct: 123 SSGQPYDVP----------ELLAGATNVGFMFLPNYRAWVVVASLAVCFATWFVIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +      
Sbjct: 173 GAYLRAGTENPKLVEAFGVNVPMMVTLTYGFGVALAAFAGVLAAPVIQV--SPLMGQPMI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+        +L  V                     +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSILTGLMLGVVEGFTRVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLRLRT 344
            + +V+L+R   L     
Sbjct: 277 IMAIVLLIRPAGLFGKER 294


>gi|15643893|ref|NP_228942.1| branched chain amino acid ABC transporter, permease protein
           [Thermotoga maritima MSB8]
 gi|4981683|gb|AAD36212.1|AE001771_5 branched chain amino acid ABC transporter, permease protein
           [Thermotoga maritima MSB8]
          Length = 299

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 87/291 (29%), Gaps = 7/291 (2%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
               + + +  +   +Y + A G ++V G L L++        +G Y      +   L+ 
Sbjct: 2   VFFLQNLFNGIMLGGLYALIAIGYTMVYGILRLINFAHGDVMMMGVYFAFYAATLLSLNP 61

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
                V+ + +   G ++   + K   +   I+ LI +      L     +  G      
Sbjct: 62  LFSAIVAILGAALLGFLIDRVAYKPLRNAPRISALITAIGVSFFLESLAVVVFGAI---- 117

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                FL       I       +     +  + V+     +   +   + RT I  A R 
Sbjct: 118 --PKSFLKVFKDRTILNKVLTVAGARIPLLTFLVIFITAVILIVLFFIVYRTKIGMAMRA 175

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  +      +   +       FA+ SA    +G  +A     + P M  F   +     
Sbjct: 176 ISMDIPTTALMGVNVDAVIGFTFALGSALAAASGIMWAMRFPNVHPYM-GFMPGLKAFIA 234

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            + GG+ S+        +L  +                 F     +    +
Sbjct: 235 AVFGGIGSIPGAVLGGVLLGLIEIFLAAYFPAVMGYRDAFAFIILIIILLV 285


>gi|312115666|ref|YP_004013262.1| inner-membrane translocator [Rhodomicrobium vannielii ATCC 17100]
 gi|311220795|gb|ADP72163.1| inner-membrane translocator [Rhodomicrobium vannielii ATCC 17100]
          Length = 302

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/298 (14%), Positives = 84/298 (28%), Gaps = 27/298 (9%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           +IY   A+G  +   +   L+     A  +GA           L  +L   +   +    
Sbjct: 28  MIYATIAFGYQLTFATSKTLNFGQGEALMLGA------MLGLTLLPYLGYWLMLPVILIF 81

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           GM  G    +               I   I +        +                 S 
Sbjct: 82  GMAQGAVVERLGVRPAIETKSEFGWIMATIALGIIFRNMAENIW------GRDDLKFPSP 135

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
           +         V        V++G   + A++  + RR+    A+    ++  A   +   
Sbjct: 136 LPETAIELGAVRILPAEIMVVVGALLMMAAVETFNRRSIYGKAFVATSNDIDAAGLMGID 195

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
                  ++A+SS     AG   A     ++         +   ++ I+GG+ S      
Sbjct: 196 TRRVITMSYAMSSMTAAFAGVLVAPV--TLTGATMGAVLALKAFAVAIIGGLDSALGAIV 253

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
              +L  +  L        +  +                I + +V+ +R   L   RT
Sbjct: 254 GGILLGVIETLTGYYVSTGYKDVPGL-------------ILVLIVLAIRPAGLFGRRT 298


>gi|227874037|ref|ZP_03992248.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Oribacterium sinus F0268]
 gi|227840118|gb|EEJ50537.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Oribacterium sinus F0268]
          Length = 327

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 97/313 (30%), Gaps = 25/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ ++  +++ L      +   I S+  QI I    A G+++++  LG + L      
Sbjct: 20  IMVVLLILCIIVSLATDKFLTSGNIISVLRQISINTYIALGMTLII-ILGHIDLTVGAVV 78

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+     V      GL + L I    ++    G I G+    F+     I          
Sbjct: 79  AMCGTLTVGFIVNQGLPVELAIIGGVLLGVLFGFINGVIVSTFKVPSFIITM-------- 130

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                   + N   GI                         F +  + + Y++L +  +S
Sbjct: 131 -------AMMNVANGIAYVYSGGQSTRITDGFFISIGTGYLFSLIPLPVLYMILLIIVIS 183

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             ++    +T        I  N++A       I   ++  F +S      AG   A+   
Sbjct: 184 FLLV----KTRFGVYVYAIGGNREAARLSGIPIRKIEIIVFTLSGLLSAFAGLVLASRMY 239

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P +    E   + + V     + GG  S+S       ++  +      +    +  L
Sbjct: 240 SGQPSVGNGYEMDAIAACVLGGTSMAGGKGSISGTVLGAMVIGIISNGLNLIGVSSYWQL 299

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 300 IVKGIIIATAVIL 312


>gi|40063656|gb|AAR38445.1| branched-chain amino acid ABC transporter, permease protein
           [uncultured marine bacterium 582]
          Length = 289

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 99/305 (32%), Gaps = 28/305 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +    Y + A GLSI+    G+++L     YA+GAY  V+          L   +
Sbjct: 8   ILNGLLVGSYYTLLALGLSIIFSLGGVVNLAHGAFYAVGAYLTVLFTDIL--GFGLAFLI 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  + G  G+ +    L+   +   I TL+ +        +   +  G +GI  +   + 
Sbjct: 66  TPAVVGLIGIAIEALFLRRLYNKDPILTLLFTFGLAMSGEQALRLIFGASGIPFSIPEFL 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                 +Y  +   +L       A + +   +T+     R    + +
Sbjct: 126 SGQ----------LHVGDFLYSYYRLSILAVTSLSIAGLWILFNKTSFGLIVRAGVADAE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              ++  ++       FA+      +AG+  A+                    I +LGG+
Sbjct: 176 MVRAMGISVKPILSMVFAIGVGLAAVAGSMSASLTGV--QPAMGNDIVTAAFVICVLGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S   +  A  ++  +  +                          +   + LV++ R   
Sbjct: 234 GSFWGVVFAGLLVGILKGVTALYFPPAAEGS--------------IYALMVLVLIFRPRG 279

Query: 339 LLRLR 343
           +  ++
Sbjct: 280 MFGVK 284


>gi|192292922|ref|YP_001993527.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|192286671|gb|ACF03052.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 288

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 94/304 (30%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       ++  + A GL++ +G +  ++L        G Y   +L +R G   +  +P+
Sbjct: 7   LFDGVAYGMLLFVLACGLAVTLGLMNFVNLAHGAFAMAGGYVCAVLVNRAGWPFFAALPL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + S A G ++     +       +  ++ S     + +       G +          
Sbjct: 67  AFLASAAIGAVLERLLYRHLYARSHLDQVLFSVGLVFMSVAAVDYIMGSS---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                       +     V    +   +++    L+  + L L +T   +  R   D+ +
Sbjct: 117 RVFMQLPEALQGQIDLFGVGIGRYRLMIIVICGLLTIGLQLTLAKTRFGSRLRAAVDDPR 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       FA      G  GA  A          F     I  + +V +GG 
Sbjct: 177 VASGLGINVPQVFALTFAFGCGLAGFGGALSAEILGL--DPYFPLKFMIYFLIVVTVGGS 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S++    A+ +L                               ++   + ++++ R + 
Sbjct: 235 SSITGPFLASLLLGIGDVAGKYYLPKLGP--------------FVIYTIMIVILIWRPNG 280

Query: 339 LLRL 342
           L   
Sbjct: 281 LFGR 284


>gi|39934635|ref|NP_946911.1| putative urea/short-chain amide transport system permease
           [Rhodopseudomonas palustris CGA009]
 gi|39648484|emb|CAE27006.1| putative urea/short-chain amide transport system permease protein
           [Rhodopseudomonas palustris CGA009]
          Length = 291

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/291 (16%), Positives = 97/291 (33%), Gaps = 27/291 (9%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            + GL+I++G+LG+L+      +A+GAY+  ++       +  ++     +     ++  
Sbjct: 24  VSSGLTIILGTLGVLNFAHGALFAVGAYTVFVMLQYTSSFVLAVVVGCGFMLVLGFVLER 83

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           +    F         L+   I   ++   +    G A            T          
Sbjct: 84  VIIRYFYDRPHEDQILVTYGIGIVLVECIRAGFGGNAQRVPVPSWGQGATQ--------- 134

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
               F+IY  +   ++  +  L  ++ L L RT++    R   +N      L   +  A 
Sbjct: 135 --LGFLIYPTYRLQLIAIIAGLLLALYLVLYRTSMGLVVRAGIENPGMVGILGINVRRAF 192

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           L  FA+    +G+AG  +A             +       +++LGG+ S         I 
Sbjct: 193 LLVFAIGIVAVGLAGMLYAPVVAV--SPDMGANFMAQSFVVIVLGGLGSFPGAIVGGLIA 250

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             ++ L    N  Y   +L    +  +              +MR   L   
Sbjct: 251 GEIISLTSAFNSSYSEVMLYALMALLL--------------VMRPQGLFGT 287


>gi|326405587|ref|YP_004285669.1| branched-chain amino acid ABC transporter permease [Acidiphilium
           multivorum AIU301]
 gi|325052449|dbj|BAJ82787.1| branched-chain amino acid ABC transporter permease protein
           [Acidiphilium multivorum AIU301]
          Length = 306

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 105/310 (33%), Gaps = 17/310 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++      + +GA+  +I+   +GL    ++  
Sbjct: 8   LVNGLSLGAMYALLALGFTLVYGILELINFAHFNVFMVGAFVGLIVLQWFGLQGQAVVLH 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL-- 156
            A +  +    + +  +      +AI    +  +           T G + I     L  
Sbjct: 68  GAPLVLSLLAALAVTMVTSGVLGVAIERYTLRPMRNVRGPMAMITTIGVSYILFNVVLLL 127

Query: 157 -YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                      +    +    V   +    + +    L   + L++RR+ +  A R +  
Sbjct: 128 TNAQALNYPDPMPSIDYHLGGVTIRLKAVIIWIVAAVLMWGLNLFVRRSRLGKAMRAVAQ 187

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           + +A   +   +    + AF   SA  G AG  F    +  +     ++  +   +  +L
Sbjct: 188 DAEAARMMGVEVDQVVMIAFFAGSALAGAAGMIFGLYYNF-TQYSIGYTAGLRAFTAAVL 246

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++        ++  +  +        +                ++   L L ++ R
Sbjct: 247 GGIGNVPGAMVGGLLIGLIETIGSQYIAAKWAD-------------VIIFSILILTLVFR 293

Query: 336 SHSLLRLRTP 345
              LL  + P
Sbjct: 294 PAGLLGAQAP 303


>gi|259416614|ref|ZP_05740534.1| inner-membrane translocator [Silicibacter sp. TrichCH4B]
 gi|259348053|gb|EEW59830.1| inner-membrane translocator [Silicibacter sp. TrichCH4B]
          Length = 306

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 107/308 (34%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + A GL+++ G +GL++L     Y +GA++   +    G  +  L+  
Sbjct: 10  VLNGLQSGVMLFLMAAGLTLIFGVMGLINLAHGSLYMVGAFAAAAVAGVTGSFVLALVAA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A  + A  +I      +              +    +L  +  I     G       + 
Sbjct: 70  LAAAALAGAVIEVAVIRRLYDS----------DHLDQVLATFALILIFSEGTRWVFGSFP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   +   +         + Y ++   ++     ++  + L + RT I    R   ++++
Sbjct: 120 LFLDIPDALSGPVTLPGGIQYPLYRLALIGVGLLVAFGLWLLIERTRIGIQIRAGENDRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+
Sbjct: 180 MIAALGVDISKLYTLVFALGAALAGLAGALVGAIQSV--QVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL---MVIALFLVILMR 335
            S+        ++     L            +    + +   +     + I + LV++ R
Sbjct: 238 GSIKGAFIGALLVGLTDTLVGIFLPEVLKLFMDAAPATSAGSSIASMSIYILMSLVLIWR 297

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 298 PSGLFGAR 305


>gi|119871832|ref|YP_929839.1| inner-membrane translocator [Pyrobaculum islandicum DSM 4184]
 gi|119673240|gb|ABL87496.1| inner-membrane translocator [Pyrobaculum islandicum DSM 4184]
          Length = 374

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 56/369 (15%), Positives = 119/369 (32%), Gaps = 48/369 (13%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  L +    +L + L       Y+    I + I+ + A  +++  G  G+ +   V+  
Sbjct: 6   LIGLYIYLLSVLAVALTGLDVVSYVLGTIIDVAIFTIIALSVNLEAGIGGIPNFGKVLTV 65

Query: 75  AIGAYSYV-------------------------------ILGSRYGLSIWLLIPVSAMIS 103
             GA+                                  +      L +   + +S ++ 
Sbjct: 66  TAGAFIVGGVISRIAMAMYGVSGDFVYDNPTIVSTLSRVMDFQGAFLLLLTSLVISLIVG 125

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
              G+ M  P+++ R DYLAI  L   +    I   ++P+  G  G+ +           
Sbjct: 126 AVIGVAMSAPAVRLREDYLAITLLAFGDFLFYIGRYYEPLVGGTFGVSIPP--------- 176

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                F +     V   I    +   +  L    +  + ++    A +  R++ +     
Sbjct: 177 ----IFEKIFGGGVARYIGAAALSGAIALLIYLALERIIQSPYGRALKVHREDPELVEVF 232

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK-FSENIIVISIVILGGMTSLS 282
                  +L A A+  A   +AGA +A     + P  F   +       I+ILGGM +  
Sbjct: 233 GRKATALRLWAMAIGGAVSAVAGALYALYAGAVHPSSFTRITFTFYPWLIMILGGMGNNL 292

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +     I +    +   ++ Y +                +       +I ++   L+  
Sbjct: 293 GVVNGVFIFV---TMRRLVDMYKYELSAVLGFDPVWLAYMVFGALALAIIAIKPEGLVPE 349

Query: 343 RTPSNFLER 351
            +    ++R
Sbjct: 350 ESTPLAVKR 358


>gi|301061603|ref|ZP_07202361.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
 gi|300444296|gb|EFK08303.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
          Length = 290

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/297 (17%), Positives = 96/297 (32%), Gaps = 24/297 (8%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           IY + A+GLSI  G L +L+L       +G+     L    G++ ++   +   +    G
Sbjct: 18  IYGLAAFGLSITFGVLNVLNLAHGEFLMLGSLLSYGLFVGLGINPFISAVLVIPVFMLLG 77

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +   L  LK   D      L+ S +                 I      ++         
Sbjct: 78  VFFYLLLLKPIMDKPPHQLLVASILVTM---------GASLFIEDVTSFFWERPVTGISY 128

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                  S V+       +LL +  L+  + L+L++T +  + R I   ++    +   I
Sbjct: 129 SLPPMEFSGVVISSTRLLILLFIFALACGMQLYLKKTFVGKSIRAIVQGREGAKMVGIPI 188

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
                 AF++  A    AGAF+          +      I  + +V+LGG+ S+      
Sbjct: 189 SRVSALAFSIGMALAASAGAFYVTLFTV--TPVMGIPLTIKYLCVVVLGGLGSIVGSVFG 246

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             IL     L        ++  + F     +                +   L   + 
Sbjct: 247 GLILGIAETLTAYYWGAEWSPTIAFILLIIILII-------------KPEGLFGAKK 290


>gi|66045443|ref|YP_235284.1| inner-membrane translocator [Pseudomonas syringae pv. syringae
           B728a]
 gi|63256150|gb|AAY37246.1| inner-membrane translocator [Pseudomonas syringae pv. syringae
           B728a]
          Length = 380

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/332 (12%), Positives = 83/332 (25%), Gaps = 40/332 (12%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------------ 84
            +   +  + L     A G+ ++ G  G+LSL   I + +G+Y   +             
Sbjct: 52  DFRLGLAGKYLSLAFCAVGMVMIWGYGGILSLGQGIFFGLGSYMMAMYLKLEATATDEAA 111

Query: 85  -------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                           +     L +      S    +   L          + A      
Sbjct: 112 SALAAFYGSALPDFMIWNSVEALPLWWKPFESATFTLAAILILPALLAFLFSYAYFKKRV 171

Query: 132 -IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                 +I     +     I            +      F            +Y +   +
Sbjct: 172 GGVYFSIITLSLASIMSIMIIGQQGYTGGVNGLTDFKTAFGLSLQTPQTPWILYLITTLL 231

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              S ++  ++ R+ +      IRD +             K   FAV++    + G  F 
Sbjct: 232 LLASVAMCGFILRSRLGKVIVAIRDREDRVRFSGYNTALFKAFIFAVAALISALGGVMFT 291

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                 SP +     +  ++    LGG  SL      T ++                   
Sbjct: 292 LQVGLASPSLVGIIPSTEIVIYAALGGRLSLVGAVYGTLLIGTAKTWLSE---------- 341

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +F       +      V+L     L  L
Sbjct: 342 ----NFVSFWQYFIGFLFMAVVLFLPTGLAGL 369


>gi|311105712|ref|YP_003978565.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310760401|gb|ADP15850.1| inner-membrane translocator 27 [Achromobacter xylosoxidans A8]
          Length = 306

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 90/289 (31%), Gaps = 16/289 (5%)

Query: 55  GLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
           GL+++ G +  ++L     Y IGA+           S    I  + + SG  G+ +    
Sbjct: 26  GLTLIFGIMNFINLAHGSLYMIGAFLGA-TAYNASGSFAFAILAAVVGSGLVGVALERLI 84

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
            +    +  +  ++ +        +   +  G    Y A                     
Sbjct: 85  ARPLYKHDHLYQVLATFGLMMFFNELASVIWGSRPYYAAVP----------QGLEGAVSL 134

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
               Y ++   ++     ++      ++RT      R    N      L   +   K   
Sbjct: 135 FGNDYPVYRLMIIGVGALVALGAWFLIQRTRFGMLIRAGASNAPMASVLGANVDLQKTLL 194

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           F + +   G+AGA                   I+ + ++++GG+ S+     A  ++  +
Sbjct: 195 FLLGAVLAGVAGALAGPILSV--QSGMGEPVLILALVVIVVGGIGSVRGTLVAALLIAMI 252

Query: 295 VELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMRSHSLL 340
             L          ++     +        + L+ + + +V+  R   L+
Sbjct: 253 DTLGRAFLPDMLRAVFDASVANAVGPALASMLIYVLMAVVLAFRPQGLV 301


>gi|284044244|ref|YP_003394584.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283948465|gb|ADB51209.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 295

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 98/304 (32%), Gaps = 23/304 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           + + +      IY + A G++++ G + L++         GAY   ++  +  L    +I
Sbjct: 6   QNVINALALGSIYALLALGIALMFGIMRLINFAHGELIMAGAY--AMVLLQGDLWGPFVI 63

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +  I     +++   + +          L+ S     +L        G      +   
Sbjct: 64  VAAVAIVVGVSLLIERVAFRPVRGAPPETLLVTSFGVSFLLQSLATTIFGSMPRSGSVLP 123

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G      +   +   + ++  + ++          A++ L LRRT I    R   ++
Sbjct: 124 ELSGAFTVGQLAVPKLDVAALVTTLVLF----------AAVALVLRRTPIGMQMRAAAED 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +   +L   +      AFA+S    G A    A     +   MF  +  ++     +LG
Sbjct: 174 VRTARTLGVRVNRVVAVAFAISGVLAGAAAVLLAGQAGSVD-PMFGATAVLVAFVATVLG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM SL        ++  +                             +   + LV ++R 
Sbjct: 233 GMGSLVGAVLGAYLIGFLTIGLQAYLPADMR----------PFRDAFVYGTIILVFVLRP 282

Query: 337 HSLL 340
             L+
Sbjct: 283 QGLI 286


>gi|257143219|ref|ZP_05591481.1| high-affinity branched-chain amino acid transport system permease
           protein [Burkholderia thailandensis E264]
          Length = 242

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 74/248 (29%), Gaps = 21/248 (8%)

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + VS +++G  G  +   + +       +  LI +      L  +  I  G       
Sbjct: 9   AALVVSVIVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA------ 62

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            R   +   +             V        ++     L  ++ L++  + +  A R  
Sbjct: 63  -RDMSVPVLISGAFDIRLGGDFDVTVPYARLLIVCVTIVLMIALTLFISHSRMGRACRAC 121

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            ++ +    L           F + +    + G     +  +++P    F   I   +  
Sbjct: 122 AEDMRMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAFTAA 180

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ S+        +L        G     +  ++ F               L L++L
Sbjct: 181 VLGGIGSIPGAMLGGVLLGLAETFASGYMPTEYKDVVAFG-------------LLVLILL 227

Query: 334 MRSHSLLR 341
            R   LL 
Sbjct: 228 FRPTGLLG 235


>gi|239905218|ref|YP_002951957.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
 gi|239795082|dbj|BAH74071.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
          Length = 316

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/326 (15%), Positives = 102/326 (31%), Gaps = 31/326 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY---------- 81
                + + +      +Y +FA G ++V   LG+++      + +GAY            
Sbjct: 3   FAWLLQSLLNGLSIGSVYAVFALGYTLVFSILGIINFAHGAVFTLGAYLTYALAVGHFGI 62

Query: 82  ----VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
                       L     + + A++SG  GM +   + K      A   L +       L
Sbjct: 63  NGLLADWTMPVTLPFVPALILGALLSGLAGMAVERLAFKPLRKRGADPLLALVSSLGVAL 122

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I    I         +      G     +   F+     V        +      + A +
Sbjct: 123 IVVNLIQYLVGAEIYSFPADIFGD--LPMAVIFKIGGKPVAVRTIQIILFGASLVMLAGL 180

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             ++ RT    A R   +N      L  ++    L  F +S    G++G     S   ++
Sbjct: 181 GWFIGRTRGGKALRATAENADTASLLGISVNRFILGTFFISGLLGGLSGTLIGVSFG-VA 239

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
              F  S  +  +++++LGG+ S+        ++                         +
Sbjct: 240 GPYFGVSYGLKGLAVIVLGGLGSIPGAVLGGLVIGLGEAFL--------------PSDMS 285

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLR 343
                +  + LF ++L+R   LL  R
Sbjct: 286 SYKEAVAFVLLFAILLIRPQGLLGGR 311


>gi|308235511|ref|ZP_07666248.1| amino acid or sugar ABC transport system, permease protein
           [Gardnerella vaginalis ATCC 14018]
          Length = 333

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/310 (16%), Positives = 92/310 (29%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++    L     A  +   I ++GIQ     + A+G + V+ S G + L+     
Sbjct: 34  ALIGLIILCAALSCATPAFLTSVNILNVGIQAATVAILAFGQTFVIVSAG-IDLSVGAVA 92

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AI +      G+  GL   L I +        G+I G+ +   +         +MS    
Sbjct: 93  AISSMLVAYTGASMGLPPILTIIIGVATGAVFGLISGVANAFLKLPSFIATLAMMSVARG 152

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+         +G+         G  +                       ++ M  + 
Sbjct: 153 LTLVVSDGRPISTSGMVNFFGATICGIPMP----------------------IVMMIIMG 190

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L  T    +   +  N +A       I   ++  F +S  F  +AG   A    
Sbjct: 191 VISAIILNFTTTGRSMYAVGGNMEASRLSGINIHKTQIMVFILSGVFAAVAGLVIAGRLH 250

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + S+VI      GG   +S       +L  +      +N   F   
Sbjct: 251 SAQPQAATGYEMDAIASVVIGGASLSGGKGKISGTFVGAILLAVIRNGLNILNVSSFWQQ 310

Query: 310 LKFDCSFNMR 319
           +         
Sbjct: 311 VVIGLVIAFA 320


>gi|217969036|ref|YP_002354270.1| inner-membrane translocator [Thauera sp. MZ1T]
 gi|217506363|gb|ACK53374.1| inner-membrane translocator [Thauera sp. MZ1T]
          Length = 289

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 90/294 (30%), Gaps = 15/294 (5%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
               +I    +   IY + A G+++V G L            +GA+   +     GL+ W
Sbjct: 6   FLNFHIVPGVVLGSIYAVGAIGITLVFGILRFSHFAHGDMATLGAFV-ALALVTAGLTPW 64

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             +P++        +++      +      I T++ S     +L     +  G      A
Sbjct: 65  AALPIAMAAVAVVAIVVDKLFYDYLKARPKIMTVMASLGVALMLRAVVQVVFGVDPRTYA 124

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             +                    ++      Y L  +  +   + L+LR +    A R +
Sbjct: 125 SGIVRPDEYF------------GILLRDRELYTLAAVVAIVIGLTLFLRHSRWGKAMRAM 172

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            DN               +  +A+  A    +G     + +  S  M  +   + + +  
Sbjct: 173 SDNPDLARLSGVDNRKVTMLTWAIVGALCAASGFMLGINNELHS--MMGWQVLLPMFAAA 230

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           ILGG+  +        I+    EL   +    + +   F     +       + 
Sbjct: 231 ILGGVGRVEGAVLGGLIVGIAEELSIFILPAQYKAATAFALLLLILLVRPRGLL 284


>gi|187479502|ref|YP_787527.1| ABC transporter permease [Bordetella avium 197N]
 gi|115424089|emb|CAJ50642.1| ABC-transporter, permease protein [Bordetella avium 197N]
          Length = 306

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 99/308 (32%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL++V G + +++L     Y  GAY       R G  +  ++  
Sbjct: 10  LLNGLQFGLMLFLIAAGLTLVFGIMDVMNLAHGSLYMAGAYVAAETMQRTGSFVAAVLVA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +        ++      +          L + +    +L  +  I      + +      
Sbjct: 70  AVATGVVGAVLELTVMRR----------LALRDHLAQVLGTYAIILIANDLVKMIWGPAP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + + +         ++Y  +   +++    ++A +  ++ RT      R    N++
Sbjct: 120 VMLNMPAALSGPVRLLPELLYPAYRLMIIIVGLAVAAGLYWFVTRTRAGVLVRAGASNRQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L  F + +    +AGA                   I+V+  +++GG+
Sbjct: 180 MATLMGVRVPLLFLGVFVLGAVLAAVAGALLGP--ITAVQIGMGEEILILVLVCIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335
            S+        ++  V              +     +          L+ + +  V++ R
Sbjct: 238 GSIRGAFVGALLVGMVDTAGRAFLPMLLRQVFSPAVASSVGPTLAAILIYVLMAAVLVFR 297

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 298 PSGLFPAR 305


>gi|219871819|ref|YP_002476194.1| ABC D-ribose transporter permease protein RbsC [Haemophilus
           parasuis SH0165]
 gi|219692023|gb|ACL33246.1| ABC D-ribose transporter permease protein RbsC [Haemophilus
           parasuis SH0165]
          Length = 332

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 104/310 (33%), Gaps = 11/310 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                ++  +   +      +   I ++G+Q     +   G + V+   G + L+     
Sbjct: 14  ALAGLILLVIFFSVTNDYFFTSNNIMTVGLQTSTIALIGIGATCVI-LTGGIDLSTGSVV 72

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+   +  ++ +       L + +  ++ G CG++ G+   + +      ATL M  + +
Sbjct: 73  ALSGVAAAMIVNAGVPVP-LGMVLGILVGGICGLVNGILVTQMKLPPFI-ATLGMMMVAR 130

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    +TN      + +    LG      I          +    + Y ++ M F++
Sbjct: 131 GLAL---YVTNAAPVSGMPESFAALGNGALFKIVEEGPNGLPKVVFAGIPYPVIIMIFIT 187

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L +  +      I  N++A           K+ A+  S    G+ G   A+   
Sbjct: 188 VLFTFALTKLKVGRYIYAIGSNEEAARLSGIKTNVVKIYAYVASGLLSGLTGVILASRLV 247

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E   + S V+     +GG+ ++      + I+  +           F  +
Sbjct: 248 TAQPNGGVAYELDAIASAVVGGTSLMGGVGTIPGTLIGSFIIGVLRNGLNMNGVSSFVQM 307

Query: 310 LKFDCSFNMR 319
           +       + 
Sbjct: 308 IVIGLVIIVA 317


>gi|91776127|ref|YP_545883.1| inner-membrane translocator [Methylobacillus flagellatus KT]
 gi|91710114|gb|ABE50042.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Methylobacillus flagellatus KT]
          Length = 305

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 89/301 (29%), Gaps = 19/301 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++ A GL+I+ G +G++++      AIGAY+ V L         +       I
Sbjct: 21  LSLFSVLLLMALGLAIIFGQMGVINMAHGEFMAIGAYTTVFLSRIAETYGIVNYYFLFAI 80

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
             +  +   +           +   +       +L  W      +           +   
Sbjct: 81  IASFIVAFIIGY----IVEFVLIRHLYKRPLDTLLATWGLSLVMQQIFRSTFGAKEVSAV 136

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P+  +   I   +VL     ++  + +++ R+      R    N+    +
Sbjct: 137 LPEWLMGSFQPTPDIDIPINGVFVLGLAAVVTLGVFIFMFRSRWGLRVRATVQNRVMAGA 196

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           FA+     G+AGA F       +         +    +V+ GG  S+ 
Sbjct: 197 VGINTKKVDRVTFALGCGIAGVAGAAFTTIAS--TGPTTGSLYIVDSFMVVVFGGAASVL 254

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     +           +                + +  ++++R   L   
Sbjct: 255 GTIASAFGIAQAQSILQFFMTSSMGKVATL-------------MVIVGILMLRPEGLFAS 301

Query: 343 R 343
           +
Sbjct: 302 K 302


>gi|327193582|gb|EGE60471.1| putative sugar ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 343

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 90/313 (28%), Gaps = 34/313 (10%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            +          + +    I ++ + + G + V+   G + L+     A+    +V   +
Sbjct: 20  AIINPRFLLPINLANTANLIGLFGILSIGQAYVI-ITGGIELSVGSLVALLGVLFVDFVA 78

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              +   L +P+  ++  A G + G    +       +    +              T G
Sbjct: 79  VQDMPWMLALPLILVLGAAIGAVHGWLITRLNLQPFVVTLCGLLIYRGAARFYTADGTAG 138

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                                 F             +    + +  +S ++ + L R+  
Sbjct: 139 ----------------FAFGQNFPELEFLTAGRLYGIPNTFIALVIISVAMWVVLHRSVF 182

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                 I  N++A            +SA+ +      +A  +FA     ISP        
Sbjct: 183 GRYLYAIGKNEEAARYSGIHTGRMVMSAYVICGLLTALAAIYFAMYTRSISPASHGQFYE 242

Query: 267 IIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           +  I+  +LGG        S+      T +L  +  L   +               ++  
Sbjct: 243 LYAIAAAVLGGFSLRGGEGSIVGAVLGTVLLQELQNLVNLL-----------GIPSSLNF 291

Query: 321 TTLMVIALFLVIL 333
             +  + L  V++
Sbjct: 292 AVMGGVILIGVLI 304


>gi|218886266|ref|YP_002435587.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218757220|gb|ACL08119.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 306

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/297 (14%), Positives = 94/297 (31%), Gaps = 4/297 (1%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           + + +       Y + A G ++V G L L++      + +GAY    + S     +  + 
Sbjct: 6   QNLFNALQWGSFYALIALGYTLVYGVLLLINFAHGDIFMVGAYIAFFVSSLLLGDLLGVF 65

Query: 97  PVSAMISGACGMIMGLPSLK---FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
            +    + A  + + +          + +A   L      +  ++    +          
Sbjct: 66  NLPGWAALALTVPLTMLLTAGVGVTLERIAYRPLRRKGAHRLYVVITALMCGLILENGNL 125

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             L      +  ++    +    V       +V++    +   +   + RT I  A R +
Sbjct: 126 ALLGASRRKLPDMVDKVVYTFGSVSVTNLKVWVIITAFLVFFLLQFIVTRTRIGMAMRAV 185

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             ++ A   +   +    +  F + S F G+AG  FA S   + P M         I+ V
Sbjct: 186 AWDKFALPLMGIPLDSIIVFTFVLGSGFAGLAGLLFAMSYPILDPYMGAMVGWKAFIAAV 245

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           + GG+  +        +L  +  +        F  L  F     +       +    
Sbjct: 246 V-GGIGDIRGAFIGGFLLAFIEIMVAAFLPSTFRDLFAFTILLMILWQRPTGLFGVA 301


>gi|188025822|ref|ZP_02959928.2| hypothetical protein PROSTU_01830 [Providencia stuartii ATCC 25827]
 gi|188020613|gb|EDU58653.1| hypothetical protein PROSTU_01830 [Providencia stuartii ATCC 25827]
          Length = 337

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/329 (15%), Positives = 104/329 (31%), Gaps = 27/329 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLF---------LFLGATKSQKYIDSMGIQILIYVMFAWGLSI 58
           ++KY  I+    +   + +                 SQ  +  +  QI I  + A G++ 
Sbjct: 13  MHKYGIIMAFFVLCLIVAVIGEVQVARGEWTNNYFLSQDNMLIVLRQISINGILAIGMTF 72

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           V+ + G + L+     A+         +            + M+     + +G+      
Sbjct: 73  VIITAG-VDLSVGSVLALSGIVAARFATTNAGLSIGDTANAVMMPMIIALGIGIICGLIN 131

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           G  LA   L            +       +       L   G  V  L   FR+  +  I
Sbjct: 132 GTILAKFNL----------QPFIVTMGMLSAARGLTLLTTDGNPVSQLNNDFRWLGNGYI 181

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
           ++I +  V+L + F  A ++L   +T        +  N K+  +   ++I  K+  + + 
Sbjct: 182 FDIPVPVVILIVIFALAWVLLN--KTTFGRYVYAVGGNPKSARTSGISVIKVKVLVYTLC 239

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIG 293
            A  G+AG    A             E   + ++VI      GG+ +L        I+  
Sbjct: 240 GALAGIAGLILTARTGSAQTSAGGAYELDAIAAVVIGGTSMSGGVGTLVGTFFGVLIIGV 299

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           +      +    +   +       +    
Sbjct: 300 MNNGLDLLGVPSYYQQIIKGALIVIAVLL 328


>gi|76801646|ref|YP_326654.1| branched-chain/neutral amino acids ABC transporter permease
           [Natronomonas pharaonis DSM 2160]
 gi|76557511|emb|CAI49092.1| ABC-type transport system permease protein I (probable substrates
           branched-chain/neutral amino acids) [Natronomonas
           pharaonis DSM 2160]
          Length = 300

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 89/300 (29%), Gaps = 15/300 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
                       +          V+   GL+++ G +G+++L       +G Y   +   
Sbjct: 1   MPLSPLYDGAALLFQFLDSFAFLVLATVGLAVIFGMMGVINLAHGEFILVGIYGTAL-TY 59

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL + + +    +++   G+I+    ++   D L  + +    +   +          
Sbjct: 60  HAGLPLPVAMVSGVVMTVIFGIIVERLVVQHLYDRLLDSMVATWGLALVVAQLLLITFGS 119

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                             S                   ++ L    +   + +   RT  
Sbjct: 120 SLDSISTPMGNVAYGPYTSGTYR-------------SVFLPLVALAVLVGLYVLFTRTEF 166

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   ++ +   ++        ++ FA+ S   G+ GA +A +   I+PD       
Sbjct: 167 GVKARATIEDPETARAMGIDTDRMYVTTFALGSGLAGLTGALYAPAIGAITPDRGSIFL- 225

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           +     V++GG + +     A+ +L  V  +       +   +     +          I
Sbjct: 226 VEAFVAVVVGGPSVVIGTLSASGLLGFVNAVFSFQLGTFVGLMAMLIVAIIALRVLPDGI 285


>gi|42560569|ref|NP_975020.1| ribose/galactose ABC transporter permease [Mycoplasma mycoides
           subsp. mycoides SC str. PG1]
 gi|42492065|emb|CAE76662.1| Ribose/Galactose ABC transporter, permease component I [Mycoplasma
           mycoides subsp. mycoides SC str. PG1]
          Length = 855

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/341 (9%), Positives = 85/341 (24%), Gaps = 27/341 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGAT----------KSQKYIDSMGIQILIYVMFAWGLSIVV 60
           +  I+    V    L FL +               + +       + +Y++    ++I  
Sbjct: 33  FFSIIVGFIVSGIFLSFLNINPFTYFALLFGINFDKNFYQISLNWMAVYIVAGLSMAIAF 92

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
              G+ ++       + A S   +                MI       +   +      
Sbjct: 93  K-AGVFNIG-ASVQILTATSIATIIFFSISGKDASSISPFMIILMLITCIISAAFIAFIA 150

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
            +  A   + E+   IL+ W      K             +     I   +         
Sbjct: 151 GILKALFNIHEVVSTILLNWSVFYIFKWFFGKYKDFSSGLSYTSKNIPSDQLSIGSNTVI 210

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           I +   L+        I +   +T +    + +  +      +   +    +++  +S A
Sbjct: 211 IPLLIALV----CVIIIWILFSKTVLGFKLKAVGSSVTGSKYIGINVKKQIITSLTLSGA 266

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA---KATAILIGVVEL 297
             G+AG     +    +         +   +I +     SL            +  +  +
Sbjct: 267 VAGIAGFLSMFTVSPNNFFASNSLPTLGFDAIAV-----SLV-AFNNPIGIIAIGWLWAI 320

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF--LVILMRS 336
                    +          +    L+       + I  + 
Sbjct: 321 LKTGGGPISSLYSISTQISGLISGILIYFTAIVSVFITFKP 361


>gi|118587853|ref|ZP_01545263.1| ABC sugar transporter, inner membrane subunit [Stappia aggregata
           IAM 12614]
 gi|118439475|gb|EAV46106.1| ABC sugar transporter, inner membrane subunit [Stappia aggregata
           IAM 12614]
          Length = 334

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 95/312 (30%), Gaps = 20/312 (6%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +     V+  +   +          + ++     +  + A   ++V+   G + L+    
Sbjct: 26  LAFASLVLLLIGFSIASPNFMQTSNMIAILQATSVNGVLAVAATLVI-ITGGIDLSVGTL 84

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
               A    ++ +  G+ + L +  +      CG+  G    K +               
Sbjct: 85  MTFCAVIAGVVLTNLGMPLPLGVIAAIATGALCGLCSGTFIAKMKIPPFIAT-------- 136

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
               +    I  G + +    R  +   T    +         +   + +   +L +  +
Sbjct: 137 ----LGMMLILKGLSLVISGTRPIYFNDTPGFDLISRGSLIGDIFPALPIPNGVLILFLV 192

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           + +    L RT +      +  N++A         F K+S +A++ +  G+AG   A+  
Sbjct: 193 AGAASYILGRTVLGRYTFALGSNEEAVRLSGVNTDFWKMSVYALAGSICGIAGILIASRL 252

Query: 254 DRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
           +            +  I+ V++      GG  ++        I+  +      ++     
Sbjct: 253 NSAQ-PALGLGYELEAIAAVVIGGTSLSGGRGTVLGTLIGALIMAVLTNGLRVLSVAQEW 311

Query: 308 SLLKFDCSFNMR 319
             +       + 
Sbjct: 312 QTVVTGAIIILA 323


>gi|124268941|ref|YP_001022945.1| putative branched-chain amino acid transport permease [Methylibium
           petroleiphilum PM1]
 gi|124261716|gb|ABM96710.1| putative branched-chain amino acid transport permease [Methylibium
           petroleiphilum PM1]
          Length = 295

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 106/298 (35%), Gaps = 26/298 (8%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           +    Y M + GL+++ G L +++      Y +GA+   +     GL+ W+++ ++ ++ 
Sbjct: 21  VNGSFYAMLSLGLAVIFGMLNIINFAHGALYMMGAFLAWMGLEYLGLNYWVMLLLAPLLV 80

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
           G  G+++    L++      +  L+++     +         G +G          G T 
Sbjct: 81  GVLGILIERLLLQWLYKLDHLYGLLLTFGITLVAEGIFRSFYGVSGQPYPVPSALSGAT- 139

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                       F+I   +  +V+L    +  ++   + +T++    R   +N +   + 
Sbjct: 140 ---------NLGFMILPNYRAWVVLASIVVCLAVWALIEKTSLGATLRAGTENPRLVQAF 190

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              +       +A   A    AG   A         +   +  I V ++V++GGM S+  
Sbjct: 191 GINVPRLVTLTYAGGVALAAFAGVLAAPIIQV--SPLMGSNLIITVFAVVVIGGMGSILG 248

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                                           +    +T++ + + +V+L+R   L  
Sbjct: 249 SIV--------------TGLGLGLIEGLTKVVYPEASSTVVFVIMAIVLLIRPAGLFG 292


>gi|297538550|ref|YP_003674319.1| urea ABC transporter permease UrtB [Methylotenera sp. 301]
 gi|297257897|gb|ADI29742.1| urea ABC transporter, permease protein UrtB [Methylotenera sp. 301]
          Length = 305

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 93/301 (30%), Gaps = 19/301 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++ A GL+I+ G +G++++       IGAY+ V+L        ++       I
Sbjct: 21  LSMFTVLLLMALGLAIIFGQMGVINMAHGEFMTIGAYTTVMLSKVATTYGFVNYYFVFAI 80

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
             A  +   L           +   +       +L  W      +           +   
Sbjct: 81  ILAFILAFALGY----FIEFIMIRHLYKRPLDTLLATWGLSLVMQQSFRSTFGAKEVSAE 136

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P+  +   I   +V++   F++A + +++ R+      R    N+    +
Sbjct: 137 LPEWMLGSFKPTPDIDIPINGVFVMVLALFVTAGVYMFMYRSRWGLRVRATVQNRVMAGA 196

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           FA+     G+AGA F       +         +    +V+ GG  SL 
Sbjct: 197 VGINTQKVDRVTFALGCGIAGIAGAAFTTIAS--TGPTTGTLYIVDSFMVVVFGGAASLM 254

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     +           +                + +  +++M+   L   
Sbjct: 255 GTIASAFGIAQAQSILQFFMTSSMGKVSTL-------------LVIVGILMMKPEGLFAS 301

Query: 343 R 343
           +
Sbjct: 302 K 302


>gi|170746508|ref|YP_001752768.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
 gi|170653030|gb|ACB22085.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
          Length = 295

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 105/304 (34%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+I+ G L +++      Y +GA+   +L +  GL  W  + +
Sbjct: 16  LLLGLINGSFYAILSLGLAIIFGLLNIINFAHGALYMMGAFVAWMLLTYVGLGYWWALGL 75

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ GA G+++    +        +  L+++     I+        G +G+  A     
Sbjct: 76  APIVVGAFGIVLERVLIARLYKLDHLYGLLLTFGLALIIQGLFRNQYGVSGLPYAIPAEL 135

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G               F+    +  +V++    +  +  L + +T +    R   +N  
Sbjct: 136 SG----------GQRLPFMFLPNYRAWVVVASLTVCIATWLVIEKTKLGAYLRAATENPT 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +    A  G AG   A                I+V ++V++GGM
Sbjct: 186 LVQAFGVNVPLFLTLTYGFGVALAGFAGVLAAPIYSV--NPNMGADIIIVVFAVVVIGGM 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L  V  L                  +     T++ + + LV+L++   
Sbjct: 244 GSIIGSVITGFTLGLVEGLTKVF--------------YPEASATVIFVIMVLVLLVKPAG 289

Query: 339 LLRL 342
           L   
Sbjct: 290 LFGR 293


>gi|330974158|gb|EGH74224.1| inner-membrane translocator [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 380

 Score = 65.3 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 82/332 (24%), Gaps = 40/332 (12%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------------ 84
            +   +  + L     A G+ ++ G  G+LSL   I + +G+Y   +             
Sbjct: 52  DFRLGLAGKYLSLAFCAVGMVMIWGYGGILSLGQGIFFGLGSYMMAMYLKLEATATDEAA 111

Query: 85  ----GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                         +I  S              +       +  A L     +     + 
Sbjct: 112 SALAAFYGSALPDFMIWNSVEALPWWWKPFESATFTLAAILILPALLAFLFSYAYFKKRV 171

Query: 141 KPITNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             +                I            +      F            +Y +   +
Sbjct: 172 GGVYFSIITLSLASIMSIMIIGQQGYTGGVNGLTDFKTAFGLSLQTPQTPWILYLITTLL 231

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              S ++  ++ R+ +      IRD +             K   FAV++    + G  F 
Sbjct: 232 LLASVAMCGFILRSRLGKVIVAIRDREDRVRFSGYNTALFKAFIFAVAALISALGGVMFT 291

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                 SP +     +  ++    LGG  SL      T ++                   
Sbjct: 292 LQVGLASPSLVGIIPSTEIVIYAALGGRLSLVGAVYGTLLIGTAKTWLSE---------- 341

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +F       +      V+L     L  L
Sbjct: 342 ----NFVSFWQYFIGFLFMAVVLFLPTGLAGL 369


>gi|317484397|ref|ZP_07943313.1| branched-chain amino acid transport system/permease component
           [Bilophila wadsworthia 3_1_6]
 gi|316924349|gb|EFV45519.1| branched-chain amino acid transport system/permease component
           [Bilophila wadsworthia 3_1_6]
          Length = 301

 Score = 65.3 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 91/289 (31%), Gaps = 3/289 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L L++      + IGAY    +       +   +  
Sbjct: 8   LINGLAVGGIYALVALGYTMVYGVLKLINFAHGDIFTIGAYLG--MTLLVSGGLSGSMTP 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +     ++ GL +L            +        ++     +       +      
Sbjct: 66  VLAVGLVVIIVFGLVALLGVALERVAYRPLRKANRLAAVVSALGASIVFQNAVMLIYGAR 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +     +LI    F    +   +    V++    L  ++  ++ RT +  A R +  +Q 
Sbjct: 126 VYVYPENLIPTLTFNIFGLNVPLMRVIVIVSSLVLMLALYAFINRTRMGTAIRAVAIDQG 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       F + +   G+AG        +I   M  +S  +   +  ILGG+
Sbjct: 186 AARLMGINVDRVISLVFFIGAGLGGVAGVMVGTYYGQIDFTM-GWSYGLKAFTAAILGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            ++        +L  +  L        +   + F     +       + 
Sbjct: 245 GNIPGAMIGGLLLGVIEALGASYLAMAWKDAIAFLVLILILIIRPTGLL 293


>gi|295703061|ref|YP_003596136.1| ribose ABC transporter permease RbsC [Bacillus megaterium DSM 319]
 gi|294800720|gb|ADF37786.1| ribose ABC transporter, permease protein RbsC [Bacillus megaterium
           DSM 319]
          Length = 321

 Score = 65.3 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 104/312 (33%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L   +  +++ +   +      I ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 24  LLGLFILIVIVSILNPSFLEPLNILNLLRQVAINALIAFGMTFVI-LTGGIDLSVGSILA 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     +         L I +  ++    GMI GL   K +      ATL    IF+ 
Sbjct: 83  LSSALMAGMIVSGVD-PILAILIGCVLGAVMGMINGLLITKGKMAPFI-ATLATMTIFRG 140

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L   + F      Y + +    + M    A
Sbjct: 141 LTL-----------------VYTDGNPITGLGENYYFQLFGRGYFLGIPVPAITMVLAFA 183

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + + L +T        I  N+KA F     +   K+  ++++     ++GA   +  + 
Sbjct: 184 VLWVILHKTPFGRRTYAIGGNEKAAFISGIKVPKVKVMIYSLAGLLAALSGAILTSRLNS 243

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F  ++
Sbjct: 244 AQPTAGTSYELDAIAAVVLGGTSLSGGRGRIVGTLIGALIIGTLNNGLNLLGVSSFYQMV 303

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 304 VKGIVILIAVLI 315


>gi|91780543|ref|YP_555750.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693203|gb|ABE36400.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 286

 Score = 65.3 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 98/300 (32%), Gaps = 27/300 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               ++  + A GL+++ G+LG+++      Y+ GAY        +  S WL +  + ++
Sbjct: 8   LSIGMLLFLLASGLTVIFGTLGVVNFAHGAMYSFGAYLTW-QAISWTNSFWLGLAFAPLV 66

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
             A G +  +  L+       +  L+++     IL +   +  G                
Sbjct: 67  MAAVGFVFEILCLRKTYSRDHVLQLLVTFGLVLILEEVAKVIWGLD----------YKNV 116

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               I    +  +     I+  +V+     +S ++   +  +      R    +      
Sbjct: 117 STPGILAGTWSVAGTEVAIYRLFVIAFGSVISFALFAVIDHSRAGMILRAAETHAPMVRC 176

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   + + + + FAV S    + GA  +            F+  I    +V++GG+ ++ 
Sbjct: 177 MGIKVDWVRTAVFAVGSGLAALGGAIASPLLPV--QPGAGFTIIIDSFLVVLIGGLGNIR 234

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     L       + +               L    L  V+++    L   
Sbjct: 235 GAIFSALAIGMGRALGQRWLPDWVD--------------ILTYAILVGVLMLSPQGLFSR 280


>gi|148262075|ref|YP_001236202.1| inner-membrane translocator [Acidiphilium cryptum JF-5]
 gi|146403756|gb|ABQ32283.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidiphilium cryptum JF-5]
          Length = 309

 Score = 65.3 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 105/310 (33%), Gaps = 17/310 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++      + +GA+  +I+   +GL    ++  
Sbjct: 11  LVNGLSLGAMYALLALGFTLVYGILELINFAHFNVFMVGAFVGLIVLQWFGLQGQAVVLH 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL-- 156
            A +  +    + +  +      +AI    +  +           T G + I     L  
Sbjct: 71  GAPLVLSLLAALAVTMVTSGVLGVAIERYTLRPMRNVRGPMAMITTIGVSYILFNVVLLL 130

Query: 157 -YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                      +    +    V   +    + +    L   + L++RR+ +  A R +  
Sbjct: 131 TNAQALNYPDPMPSIDYHLGGVTIRLKAVIIWIVAAVLMWGLNLFVRRSRLGKAMRAVAQ 190

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           + +A   +   +    + AF   SA  G AG  F    +  +     ++  +   +  +L
Sbjct: 191 DAEAARMMGVEVDQVVMIAFFAGSALAGAAGMIFGLYYNF-TQYSIGYTAGLRAFTAAVL 249

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++        ++  +  +        +                ++   L L ++ R
Sbjct: 250 GGIGNVPGAMVGGLLIGLIETIGSQYIAAKWAD-------------VIIFSILILTLVFR 296

Query: 336 SHSLLRLRTP 345
              LL  + P
Sbjct: 297 PAGLLGAQAP 306


>gi|220906476|ref|YP_002481787.1| inner-membrane translocator [Cyanothece sp. PCC 7425]
 gi|219863087|gb|ACL43426.1| inner-membrane translocator [Cyanothece sp. PCC 7425]
          Length = 436

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 63/169 (37%), Gaps = 5/169 (2%)

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           + ++++ +  L    +     +      + IR++++   +L   +   KL +F +  A  
Sbjct: 272 LLWLVILVLALMFWQLERWVHSPWGRVLKAIREDEEVARALGKNVFVYKLQSFMLGGAMT 331

Query: 243 GMAGAFFAASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
           G+AGAF+A     + P   F         +IV+LGG  + +      AI      L   +
Sbjct: 332 GVAGAFYAWQLSFLEPKGTFDSLLTFQAWTIVVLGGSGNNAGTLLGAAIFWAYTGLTRFL 391

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           N          D         L+ + L ++++ R   +L  +       
Sbjct: 392 NDALPLD----DARIGAFRVMLIGLLLVVLMMWRPQGILGKKEELTLGR 436



 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 86/213 (40%), Gaps = 1/213 (0%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S+GI   I+ +F+ GL++  G  GL++   V    +GAY+ ++L S   + + + +
Sbjct: 3   NYLVSLGIFTAIFALFSLGLNLQWGYTGLINFGQVAFLGLGAYTTILLSSAG-VPLIIAV 61

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            + A+++   G+ +G  +L+ R DYLAI T+ ++E+ Q + +  + +T G  G+Y     
Sbjct: 62  GMGAILAALLGLGIGFSTLRLREDYLAIVTIGVAEVLQRVALNEEWLTRGARGVYGYPLP 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                    +        + ++      +       +  ++         S     +   
Sbjct: 122 LRNFNPPLVVALAMVALLTAIVALAGWRWWQWLRHHIHGALHPTAGWQGFSLIPYLVCLA 181

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              F         + +  F    A I   G  +
Sbjct: 182 GLQFSLWQLCTGGSPIFWFGAGLALILAVGCCY 214


>gi|294339355|emb|CAZ87711.1| putative ABC-type branched-chain amino acid transport system,
           permease component [Thiomonas sp. 3As]
          Length = 295

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 102/298 (34%), Gaps = 26/298 (8%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           +    Y M + GL+++ G + +++      + +GA    + G    L+ W ++  + ++ 
Sbjct: 21  VNGAFYAMLSLGLAVIFGLMEVVNFAHGAFFMMGAMFAWMGGQYLHLNFWWMLLFAPLLV 80

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
           G  G+ +   +L+       I  L+++     ++        G AG              
Sbjct: 81  GLFGIGVERVALRRLRGIDPIYGLLLTFGLTLLIEGVFRSFFGVAGAPYNPP-------- 132

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
              +        F+    +  + ++    +     L + RT +    R   +N     + 
Sbjct: 133 --ELLSATLNLGFMYLPAYYLFAVVASLLVCFGTWLLIDRTKLGAYLRAGTENPALIQAF 190

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
                   +  F   SA  G+AG   A         +   +  I+V +IV++GGM S+  
Sbjct: 191 GVNFPRMVMLTFGFGSALAGLAGVLAAPVIQV--SPLMGSNLIIVVFAIVVIGGMGSVLG 248

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              +   L  +  L         N+              ++ I + LV+ MR   L  
Sbjct: 249 AIVSGLALGLIEGLAKVFYSPVSNT--------------VVFILMALVLTMRPAGLFG 292


>gi|239834016|ref|ZP_04682344.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301]
 gi|239822079|gb|EEQ93648.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301]
          Length = 311

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 85/303 (28%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y       + GL+    I ++
Sbjct: 31  VDALAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMIGGYFASYAAQQLGLNYGFAIIIA 90

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
              +    + +     +       +  ++M+      +I       G            L
Sbjct: 91  VAGTMLIAVPVERLLYRRIYGAPELTQVLMTIGITFCIIGLTNYIFGP----------TL 140

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T              F        + +     ++  +   + RTA     R   DN   
Sbjct: 141 KTIPLPEALRGSVDLGFRAIAKHRVFAIGCGLVVALGLWYIIERTAFGVKLRAAVDNANM 200

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FA++     + G   A          +     +  + +V +GG  
Sbjct: 201 TAALGVRTEIVYAVSFALAIGLAALGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGAG 258

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L  +      +                        +A+ +++ +    L
Sbjct: 259 SIPGALIACLLLGAIDTTGRYLA--------------PEYGEFFFYLAVIVIVTLFPRGL 304

Query: 340 LRL 342
              
Sbjct: 305 AGR 307


>gi|158338512|ref|YP_001519689.1| branched-chain amino acid ABC transporter permease [Acaryochloris
           marina MBIC11017]
 gi|158308753|gb|ABW30370.1| branched-chain amino acid ABC transporter, permease protein
           [Acaryochloris marina MBIC11017]
          Length = 308

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/295 (9%), Positives = 81/295 (27%), Gaps = 9/295 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      I  + A GL++  G L L +         GA+   +  ++    +   +  
Sbjct: 11  FINGIAVGSIIALAAVGLTLTYGILRLPNFAHGDFMTTGAFLTFLFNTQVLNHVVFGVDW 70

Query: 99  S-AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             ++ + A   I  + +         I   ++    ++       +     G+ +  R  
Sbjct: 71  LDSLFAQANVWISIILATIVTIGGFLICEFLIWAKMRDRRATSTTLIIISIGLALFIRNG 130

Query: 158 FLGTTVRSLIRFFRF------PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
            +         +             V    +   V+         +   L+ T I  A R
Sbjct: 131 IIFIWGGGNKSYDLPVAKAAEILGVVKIPYYRLIVIGLAILAVVGLHCLLQYTKIGKAMR 190

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            + D+          +    L  + ++     ++G  +             +   + + +
Sbjct: 191 AVADDIDLASVSGIDVNRVVLWTWVLAGGLTALSGGMYG--LITAVRPNMGWFLILPMFA 248

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            V+LGG+ +         ++    E+        +   +       +       +
Sbjct: 249 SVVLGGIGNPYGAIAGAMVIGIAQEVSTYWLPTEYKLAIALLAMVLVLLVRPQGL 303


>gi|85058591|ref|YP_454293.1| sugar ABC transporter permease component [Sodalis glossinidius str.
           'morsitans']
 gi|84779111|dbj|BAE73888.1| sugar ABC transporter permease component [Sodalis glossinidius str.
           'morsitans']
          Length = 345

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/330 (14%), Positives = 101/330 (30%), Gaps = 27/330 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLF---------LFLGATKSQKYIDSMGIQILIYVMFAWGLS 57
           RL+KY  I+    +   + +                   + +  +  QI I  + A G++
Sbjct: 20  RLHKYGIIIAFFVLCLVVTIIGEVQVANGAWSNNYFLRNENMLIVLRQISINGILAIGMT 79

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
            VV + G + L+     A+         +            + ++     + +G+     
Sbjct: 80  FVVITAG-VDLSVGSVLALSGIVAARFATTNSGLSIGDSAHALIMPMLVALAIGIVCGLI 138

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
            G  LA          +  L  +       +       L   G  V  L   FR+  +  
Sbjct: 139 NGTILA----------RYRLQPFIVTMGMLSAARGLALLTTDGNPVSQLNPDFRWLGNGY 188

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +  I +  +L    F    ++L   +T        +  NQK+  +   +++  K+  + +
Sbjct: 189 VLGIPVPVILFIALFALGWVLLN--KTLFGRYVYAVGGNQKSARTSGISVVKIKVLVYTL 246

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILI 292
             A  G+AG    A             E   + ++VI      GG+ +L        I+ 
Sbjct: 247 CGALAGIAGLILTARTGSAQTSAGAAYELDAIAAVVIGGTSMAGGVGTLVGTFFGILIIG 306

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            +      +    +   +       +    
Sbjct: 307 VMNNGLDLLGVQSYYQQIIKGALIVVAVLL 336


>gi|227820697|ref|YP_002824667.1| putative ribose transport system, inner-membrane translocator
           [Sinorhizobium fredii NGR234]
 gi|227339696|gb|ACP23914.1| putative ribose transport system, inner-membrane translocator
           [Sinorhizobium fredii NGR234]
          Length = 361

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 91/314 (28%), Gaps = 19/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +L     +      G   S   +  +  QI +  M     ++V+ + G + L+  +  
Sbjct: 52  FVVLIASILVFGLAIGGRFFSSYTLTLILQQIAVVGMLGAAQTLVILTAG-IDLSIGVIM 110

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I A         YGL   + +    ++ GACG++ GL   + +     +       +  
Sbjct: 111 VISAVVMGNCAVSYGLPAPIAVAAGFLVGGACGLLNGLLVSRLKLPPFIVTLGTWYVVMS 170

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              I  +            +                 F  +F +    +   ++ M  L 
Sbjct: 171 TNFIYSE------------NATIREADVTAVTQWLHVFGVTFKVGAAVLTLGVVAMVVLV 218

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L  TA       + D+ +A       +    LSA+ ++     +A         
Sbjct: 219 FGLWYALNHTAWGRHLYAVGDDPEAAKLSGIRVGKVLLSAYTLAGLIAALAAWVSIGRNG 278

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            ISP       N+  I+  ++GG+       S+        I+  V      +       
Sbjct: 279 SISPSAAVTDYNLQAITAAVIGGISLFGGRGSILGTLIGAMIVGVVSMGLNMLGADPQWK 338

Query: 309 LLKFDCSFNMRHTT 322
           +             
Sbjct: 339 VFLTGVLIISAVAI 352


>gi|87303363|ref|ZP_01086151.1| integral membrane protein of the ABC-type Nat permease for neutral
           amino acids NatD [Synechococcus sp. WH 5701]
 gi|87282011|gb|EAQ73973.1| integral membrane protein of the ABC-type Nat permease for neutral
           amino acids NatD [Synechococcus sp. WH 5701]
          Length = 310

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 92/311 (29%), Gaps = 23/311 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y +FA G ++V   LG+++      + IG Y   +L      +  LL   
Sbjct: 8   LINGLASGAVYALFALGYTLVFSVLGVINFAHGAMFTIGGYLTYLLIGGAVGANGLLAGW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT--------NGKAGI 150
              I+    + + L         L +  +    + Q        +               
Sbjct: 68  QLPIALPFWLALALAGAGSALVGLGVEAVAFRPLRQRNAEPLLYLISSLGAGVVLVNLVQ 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +     +                           +LL    L   + LWL  +    A 
Sbjct: 128 LLMGAESYSIPASTLAALPPALSLGGAQIRTVQLLLLLVAALLLVLLTLWLEGSRNGKAL 187

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           + + ++      L          AFA+S    G+AG     S   I+   F     +  +
Sbjct: 188 QAVAEDPTTARLLGIDSGAMIRLAFALSGFLAGVAGGLVGLSV-SIAGPYFGIGYGLKGL 246

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            +++LGG+ S+        I+     L                   +     +    LFL
Sbjct: 247 GVLVLGGLGSVPGAVLGGLIVGLAEALV--------------PSELSGYKDGVAFAILFL 292

Query: 331 VILMRSHSLLR 341
           V+L+R   LL 
Sbjct: 293 VLLLRPQGLLG 303


>gi|330978921|gb|EGH77980.1| inner-membrane translocator [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 281

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 52/138 (37%), Positives = 74/138 (53%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KYI ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 104 IIPMLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W  +P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223

Query: 140 WKPITNGKAGIYVADRLY 157
           W   T G  G+ V    +
Sbjct: 224 WLSFTGGPNGVPVPAPTF 241


>gi|327310078|ref|YP_004336975.1| inner-membrane translocator [Thermoproteus uzoniensis 768-20]
 gi|326946557|gb|AEA11663.1| inner-membrane translocator [Thermoproteus uzoniensis 768-20]
          Length = 292

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 84/305 (27%), Gaps = 19/305 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  I   IY + A GLS + G L ++++       +GAY+       +     L I
Sbjct: 6   PYFLNGLIVGSIYGLIAIGLSFIFGILRIINVAHGSFVMLGAYTAYFFFVLWAYPPLLSI 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                     G+ +    +K       +  L+      +++ +   I  G          
Sbjct: 66  FAGLFFGMLMGLALYYAIIKPLSKIGELHVLVALFALGSLIAEIARIVWGPD-------- 117

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 V           S  + +            ++  + L L RT    + R +  +
Sbjct: 118 -----VVGFTWNVGSVAVSGYVIQFSQLAGAAAALSIALLLQLMLYRTNFGRSIRAVVQD 172

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 +   +      + A+        G                    ++   I ++G
Sbjct: 173 PVGAQMVGIDVDRVFALSTAIGIGLTTAGGVLLTLFIPVGINPYMGDPYTLMAFVIAVMG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S      A  I   ++ L   +                     +  + L L +L R 
Sbjct: 233 GLESTMGAYIAGLIFGEILSLGYPLFSRLG------FAGPYQMSLFIGFVILILFLLFRP 286

Query: 337 HSLLR 341
             L R
Sbjct: 287 TGLFR 291


>gi|87118311|ref|ZP_01074210.1| ribose transport system permease protein RbsC [Marinomonas sp.
           MED121]
 gi|86165945|gb|EAQ67211.1| ribose transport system permease protein RbsC [Marinomonas sp.
           MED121]
          Length = 330

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/303 (10%), Positives = 76/303 (25%), Gaps = 25/303 (8%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           +        +   I ++  Q  +  + A G+++V+ + G + L+     A+       L 
Sbjct: 42  VSFLNPHFFTMGNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSILALCGAFAATLI 100

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           S     +  +       +        + S                + F   L+    +  
Sbjct: 101 SLEVPVMLAVPIALFAGAALGAASGIIISK------------GKVQAFIATLVGMTLLRG 148

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                     +    T V            F I       V++               T 
Sbjct: 149 VTMVYTDGRPISTGFTDVSDTFSLIGTGYVFGIPVPVWLMVIVFASVWYLL-----NHTR 203

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
                  +  ++ A       +   K+  +A+      +AG    +      P       
Sbjct: 204 FGRYVYAVGGSESATRLSGINVDRVKIGVYAICGLLAALAGLIVTSRLSSAQPTA-GMGY 262

Query: 266 NIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            +  I+ V+LGG         +        I+  +      ++   +  ++       + 
Sbjct: 263 ELDAIAAVVLGGTSLAGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLA 322

Query: 320 HTT 322
              
Sbjct: 323 VLV 325


>gi|57168887|ref|ZP_00368017.1| branched chain amino acid ABC transporter, permease protein
           [Campylobacter coli RM2228]
 gi|305431962|ref|ZP_07401129.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Campylobacter coli JV20]
 gi|57019723|gb|EAL56409.1| branched chain amino acid ABC transporter, permease protein
           [Campylobacter coli RM2228]
 gi|304445046|gb|EFM37692.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Campylobacter coli JV20]
          Length = 319

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 97/314 (30%), Gaps = 23/314 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI------ 92
           + +      +Y + A G ++V G L L++        +GAY  ++L + +   I      
Sbjct: 10  LVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDIMMVGAYIALLLINFFSPIINHLNQT 69

Query: 93  -----WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                 L   +  + + A    M   S+            +      ++LI    I+   
Sbjct: 70  FFGSDELGKYLVVIFAAALVASMIFSSIVGILIDKIAYKPLRKAPRISLLITAIGISFFL 129

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
             ++               I         V   +    V L    +   ++  L ++   
Sbjct: 130 QNLFNVIFTSTEQQFPAPPIFETLVSIGGVSTTLGSLLVPLVTLVVMLGVLFILYKSKYG 189

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
            A R +  + +    +           FA+ SA   +AG F++++     P M      +
Sbjct: 190 IAIRALAFDIQTVNLMGINANRIIAIVFALGSALAALAGIFWSSNYYSAYPTM-GTLVGL 248

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              +  +LGG+ S+        I+     +            + F    +        I 
Sbjct: 249 KAFAAAVLGGIGSVVGAVLGGLIIGLTEVM-----------AVAFFPELSGFKDAFAFIF 297

Query: 328 LFLVILMRSHSLLR 341
           L  ++L R   +L 
Sbjct: 298 LVFILLFRPTGILG 311


>gi|288920676|ref|ZP_06414979.1| inner-membrane translocator [Frankia sp. EUN1f]
 gi|288347946|gb|EFC82220.1| inner-membrane translocator [Frankia sp. EUN1f]
          Length = 335

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 93/312 (29%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  L   +      +      +  Q+++    A G ++++ + G + L+     A
Sbjct: 33  VIALVLAGLFFSIKSDRFLTGGNFSLILQQVMVVGTLAIGQTLIILTAG-IDLSNGAIMA 91

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +G      L    GL+ +L I +  +   A G++ G      R     +    ++  F  
Sbjct: 92  LGNILITKLAVDAGLNPFLAIGLGLLACTAFGLLNGGLVTTIRLPPFIVTLGTLNIAFAL 151

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             I                      T             +F + +  + Y  L M  L  
Sbjct: 152 THIY-----------------SNEETISDLPAALTYLGKTFNVGQTEITYGSLLMIALFG 194

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L +T+       + DN +             L+ +AV+    G+A     +    
Sbjct: 195 IAWCILTQTSAGRHIYAVGDNPEGARLTGIRTRRVVLTVYAVAGFIYGIASLLLVSRTGV 254

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P+  +      + ++V     + GG  S++       I+  +      +       +L
Sbjct: 255 GDPNAGQTDNLDSITAVVLGGTSLFGGRGSVAGTLLGALIVGVIRNGLQLIGTKSIYQVL 314

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 315 ITGILVILAVAI 326


>gi|89069274|ref|ZP_01156637.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
 gi|89045150|gb|EAR51218.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
          Length = 343

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/316 (11%), Positives = 91/316 (28%), Gaps = 16/316 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
                 +       S     ++  + A GL++V G + +++       ++GA+  + +  
Sbjct: 38  LAIGSPSSWLTLTVSGLAMGMMIFVMASGLTLVFGLMDVINFGHGAFISLGAFLGISVLL 97

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT-LIMSEIFQNILIKWKPITN 145
                         + +    + + +      G          +       ++       
Sbjct: 98  ALPGWTAADSLALNLTAVLLAIAVAMVLTGLVGWGFERVIVRPVYGAHLKQILVTVGGLI 157

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
               +             R          +    E +    +     +  ++ L LRRT 
Sbjct: 158 VIEQLIHVIWGPDEIFLTRPEALKGAVTFAGAALEKYRILAVGFGLVIFVAMRLVLRRTK 217

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           I    R    N +   +L   +    +  F   SA  G+ G  +A  ++ I+  M     
Sbjct: 218 IGLIVRAGVQNGEMVETLGYRLRLVFIGVFIAGSALAGLGGVMWALYQEVITAGM-GERM 276

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
            I+V  +VI+GG+ S+        ++  +      +                       +
Sbjct: 277 MILVFIVVIIGGLGSVEGAFIGALLVGLLQNYVAFLE--------------PKLALVSNI 322

Query: 326 IALFLVILMRSHSLLR 341
             +  +++ R   ++ 
Sbjct: 323 GLMTAILMWRPQGMMP 338


>gi|254720747|ref|ZP_05182558.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella sp. 83/13]
 gi|265985803|ref|ZP_06098538.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306839299|ref|ZP_07472115.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella sp. NF 2653]
 gi|264664395|gb|EEZ34656.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306405547|gb|EFM61810.1| high-affinity branched-chain amino acid transporter membrane
           protein [Brucella sp. NF 2653]
          Length = 287

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 95/303 (31%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A GL++V G L +++L       +G Y   ++ + +G+  ++ +  
Sbjct: 8   VINGILLGGLYAIMAQGLALVWGVLNIVNLAYGTMIMLGGYVTWLVFANFGIDPFIGVFA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A +    G  +    L           L+++   + I               +      
Sbjct: 68  AAAVMFCFGYALQRCVLNLVARGPMFNALLITFGIEIIFTDVAQHVFSADFRAIIPSYSA 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +            F    +   +      +    +S  +  ++  T +  A R    N  
Sbjct: 128 VN-----------FNVYGITIPLMNLLAFIAAFVVSGFMFFFMMTTKLGRAIRATAQNLT 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A               F +  A  G+AG  +A                    +I I+GG+
Sbjct: 177 AARLYGVEPRHLYAVTFGIGVAIAGVAGGLYATVNQL--NPYIGVPLTAKSFAITIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +   +     IL  +  L        + +++ F               L LV+++R   
Sbjct: 235 DNPLGVILGGLILGVIESLTVLYLGDTYRNVVSFS-------------ILVLVLIIRPGG 281

Query: 339 LLR 341
           LL 
Sbjct: 282 LLG 284


>gi|167564903|ref|ZP_02357819.1| sugar ABC transporter, permease protein [Burkholderia oklahomensis
           EO147]
          Length = 329

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/314 (11%), Positives = 87/314 (27%), Gaps = 29/314 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ VV   +L        + +    +  Q  I  + A G++ V+     + L+     
Sbjct: 31  IPIIFVVLCAVLAFASPYFLTWRNWSDILRQTSINGILAIGMTYVI-LTKGIDLSVGSVL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      + G+            +++  G                   +   + +    
Sbjct: 90  ALAGIVSGLAGAA------GHGLAASLAVGVACGAALGAINGVTIARFNVPPFVATLGML 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           +I      I N  + +                     + S  +     +   +L    ++
Sbjct: 144 SIARGVTYIVNDGSPVANLP---------------DDYLSLGIGKLGPLGMPVLIFAAVA 188

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    LR T        +  N+K+  +    +     S + VS A  G+AG   AA   
Sbjct: 189 LACWWVLRYTTYGRYLYAVGGNEKSARTSGIGVRKVVFSVYVVSGALAGLAGMILAARTT 248

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                    S  +  I+ V++GG         +        ++  +      +    +  
Sbjct: 249 SA-LPQAGVSYELDAIAAVVIGGTSLSGGQGGVVGTLFGALLIGVINNGLNLLGVSSYYQ 307

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 308 QIAKGLIIVLAVLI 321


>gi|167770956|ref|ZP_02443009.1| hypothetical protein ANACOL_02310 [Anaerotruncus colihominis DSM
           17241]
 gi|167666996|gb|EDS11126.1| hypothetical protein ANACOL_02310 [Anaerotruncus colihominis DSM
           17241]
          Length = 340

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/327 (10%), Positives = 97/327 (29%), Gaps = 23/327 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           +  F     +   +L ++ +V  L+     G+  +   ++ M  +  + ++ + G+ IV+
Sbjct: 10  IRRFLHERTQQAALLGVILIVSILVQLRTGGSFLTASNLNEMMREASMLIIVSVGMMIVI 69

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
              G + L+      +      +          + + + AM  G    ++    +     
Sbjct: 70  -VGGGIDLSVGSVMGLSGMIAALTLRANPQMPVIAVFLVAMGVGLICGVITGFVVAELRI 128

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           +  I TL   +I + ++  +               L      +  +     F +  VI+ 
Sbjct: 129 FPLIGTLGTCDILRGVIYWFSNGEWVGQSDMTPGFLSIATDKLLGINCMVWFAAGAVIFG 188

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             +                 +  T +      + +++          +  K  ++  S  
Sbjct: 189 TIL-----------------MGHTRLGRHIYAVGNSEHCAKISGINTVKVKWISYIFSGV 231

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVV 295
             G+AG  +               E  ++ S+V     I GG  ++  +   + +   + 
Sbjct: 232 LAGLAGVLWVCKYANAQGTTATGYELNVIASVVLGGVSIKGGAGTIFGVVLGSLLFGILN 291

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            +   +    F           +    
Sbjct: 292 NILPLIQVSSFWQRAIRGAVILLAVII 318


>gi|145298948|ref|YP_001141789.1| ribose ABC transporter permease protein [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|142851720|gb|ABO90041.1| ABC-type ribose transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 322

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/312 (8%), Positives = 86/312 (27%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LVALLVLIGVVSFLSPNFFTADNLLNILRQTSVNAIMAVGMTLVILTAG-IDLSVGSVLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + +       ++       +   G+   + +                + F  
Sbjct: 82  LCGALAATMVAMELPIALVVPLTLGAGALLGGISGLIIAK------------GKVQAFIA 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +          F      Y + +   +  M  +  
Sbjct: 130 TLVTMTALRGVTMVYTEGRPISTGFSEGSDH-----FARLGTGYLLGLPVPIWLMAIVFL 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L  T +      +  N+ A       +   KL+ + +      +AG    +    
Sbjct: 185 LAWYLLNHTRLGRYIYALGGNESATRLSGINVARVKLAVYGLCGMLSALAGLIVTSRLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 245 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 AKASVILLAVMV 316


>gi|126652405|ref|ZP_01724578.1| branched-chain amino acid ABC transporter, permease [Bacillus sp.
           B14905]
 gi|126590826|gb|EAZ84940.1| branched-chain amino acid ABC transporter, permease [Bacillus sp.
           B14905]
          Length = 290

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 52/307 (16%), Positives = 106/307 (34%), Gaps = 27/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++  + A GL+++ G + +L+      +  GAY+  I    Y  S  + I  
Sbjct: 8   IINGLATGMLIFLLAAGLTLIFGLMDVLNFAHGGLFVWGAYA-GIFTYMYTESFIVGIIG 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G I     +        I  ++++     +L +   +  G  G+ V    Y 
Sbjct: 67  AILTGALLGFITEKLIITPVYGN-HIQQILITLGLMLVLQELIKVVFGPNGVAVKTPSYL 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G           +    VI   +  ++++    +       L+RT I    R    +++
Sbjct: 126 AG----------SWEIGDVIIIKYRLFIIVTGFVIFGIFQYMLKRTKIGLIVRAGVQDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I    L  F + +A   ++G   A     I  +M      I+   +V++GGM
Sbjct: 176 MAQALGIHIKRVFLYVFMIGAALAALSGMLMAPYSGVIYAEM-GMEYAILGFIVVVIGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S S    A  ++                          +    + +I + +V++ R   
Sbjct: 235 GSFSGSLLAAILVGLAGSFMAYY--------------VPVLSLAVNMILMAIVLIFRPQG 280

Query: 339 LLRLRTP 345
           L  LR  
Sbjct: 281 LFALRKE 287


>gi|302343144|ref|YP_003807673.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075]
 gi|301639757|gb|ADK85079.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075]
          Length = 291

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 92/302 (30%), Gaps = 24/302 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S       Y + A  + I+  +  +L+        + A+    L    G   ++    
Sbjct: 6   LVSGIAIGATYALMALAMVIIYKTSEVLNFAQGDMAMLSAFVSYSLLENMGYGFFISFSA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G  M    L+   +   +  +I++   Q I+        G         +  
Sbjct: 66  AIVFAFLLGAFMEYAFLRRAKNPNVLGMVIITLGLQMIIYGLASWKWGADQKDFPFPVSD 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V+        ++    L  ++ L+ R T    A +  + N  
Sbjct: 126 FDVHDLG---------GGVVISDLNLVTMVVAIVLMLALFLFFRYTKAGVAMKATQQNAP 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    +  + +SS     A    A++          ++  +   S  +LGGM
Sbjct: 177 VARLMGIRVNRILMMTWGISSVIGAAAAFLIASTDTL--DPNLMWTPQLKGFSAAVLGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TSL        IL  +  L  G     F S++ F               + L++ ++   
Sbjct: 235 TSLVGPVVGGFILGVLENLFGGYVSVEFKSVVAFG-------------VIVLILCVKPSG 281

Query: 339 LL 340
           L 
Sbjct: 282 LF 283


>gi|239817900|ref|YP_002946810.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239804477|gb|ACS21544.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 291

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 96/305 (31%), Gaps = 25/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S   Q  IY + A G  ++  +   +S        +GA+      S +GL  WL   +
Sbjct: 7   LLSGIAQGCIYGLIALGFVLIYKATETVSFAQGDLMMLGAFGAFAGMSPFGLPFWLAALL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + M   A G+++ L  ++        + ++++     +               +   +  
Sbjct: 67  AVMAMAAFGVLLELVVIRPILGQPQFSIVMLTIGIAYVARGLI---------TMVPGIGT 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+    +   +    ++  +    +++    L   +    R + +  A +    NQ 
Sbjct: 118 DTHTLPVPYKDQIWKLGGLVVNLEQLAIIVATAILCGLLFAMFRYSKLGIAMQASSQNQL 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A + +   +       + +++A   +AG   A                +      ++GG 
Sbjct: 178 AAYYMGIPVKRLNGLVWGLAAAVAAIAGMLLAPITFV---HANMGFIGLKAFPAAVVGGF 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        ++  V           F                   I + L+++++ + 
Sbjct: 235 GSLPGAIVGGLVIGIVESFAGFYLPDGFKDTAP-------------YIVVLLMLMIKPNG 281

Query: 339 LLRLR 343
           L   +
Sbjct: 282 LFGEK 286


>gi|254471379|ref|ZP_05084781.1| ABC sugar transporter, inner membrane subunit [Pseudovibrio sp.
           JE062]
 gi|211959525|gb|EEA94723.1| ABC sugar transporter, inner membrane subunit [Pseudovibrio sp.
           JE062]
          Length = 336

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 96/311 (30%), Gaps = 18/311 (5%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +     +V  +   L          + ++     +  + A   ++++   G + L+    
Sbjct: 26  LAFASLIVLLIGFGLASPNFMQMSNMIAILQATSVNGVLAIAATLII-ITGGIDLSIGTM 84

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
               A    ++ + +G+ + L +  +      CG+  G    K +               
Sbjct: 85  MTFCAVIAGVVLTYWGMPLPLGVAAAIATGAFCGLCSGTFVAKMKVPPFIAT-------- 136

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
               +    I  G + +    R  +   T    +         +I  + +   +L +  +
Sbjct: 137 ----LGMMLILKGLSLVISGTRPIYFNDTPGFDLISRGSVIGAIIPGLQIPNGVLILFLV 192

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           + +    L RT +      +  N+++           K+  +A++    G+AG   A+  
Sbjct: 193 AIAASYILGRTVLGRYTFALGSNEESVRLSGVNTDAWKMGIYALAGGICGIAGILIASRL 252

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +   P +    E   + ++VI      GG  ++        I+  +      ++      
Sbjct: 253 NSAQPALGLGYELEAIAAVVIGGTSLAGGRGTIMGTLIGALIMAVLTNGLRVLSVAQEWQ 312

Query: 309 LLKFDCSFNMR 319
            +       + 
Sbjct: 313 TVVTGGIIILA 323


>gi|192290151|ref|YP_001990756.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|192283900|gb|ACF00281.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 291

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/291 (16%), Positives = 97/291 (33%), Gaps = 27/291 (9%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            + GL+I++G+LG+L+      +A+GAY+  ++       +  ++     +     ++  
Sbjct: 24  VSSGLTIILGTLGVLNFAHGALFAVGAYAAFVMLQYTSSFVLAVVVGCGFMLVLGFVLER 83

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           +    F         L+   I   ++   +    G A            T          
Sbjct: 84  VIIRYFYDRPHEDQILVTYGIGIVLVECIRAGFGGNAQRVPVPSWGQGATQ--------- 134

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
               F+IY  +   ++  +  L  ++ L L RT++    R   +N      L   +  A 
Sbjct: 135 --LGFLIYPTYRLQLIAIIAGLLLALYLVLYRTSMGLVVRAGIENPGMVGILGINVRRAF 192

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           L  FA+    +G+AG  +A             +       +++LGG+ S         I 
Sbjct: 193 LLVFAIGIVAVGLAGMLYAPVVAV--SPDMGANFMAQSFVVIVLGGLGSFPGAIVGGLIA 250

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             ++ L    N  Y   +L    +  +              +MR   L   
Sbjct: 251 GEIISLTSAFNSSYSEVMLYALMALLL--------------VMRPQGLFGT 287


>gi|23664432|gb|AAN39369.1| ABC-transporter [Azoarcus evansii]
          Length = 288

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 105/303 (34%), Gaps = 28/303 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLSIWLLIP 97
           + +     L+  + A GL++V G +G+++L     Y +GAY ++ +      L + + + 
Sbjct: 10  VLNSLQYGLLLFLVASGLTLVFGIMGIINLAHGSFYMVGAYLAFALTSLTGNLMLAIALG 69

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           +         +   L S  ++ D+L    L    I     ++   + +   G+ + +   
Sbjct: 70  LPLAFVFGAILEWALFSHLYKRDHLEQVLLTYGLILIFEELRSLAVGDDVHGVTIPELFS 129

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                           S  + Y ++   + +    L+  +   +++T +    R    ++
Sbjct: 130 ASIP-----------LSDNLSYPLYRLVISVVCLALAGGLYWLIQKTRLGMMIRAGSHDR 178

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +L   I     + FA+  A   +AG   A             S  II   IV++GG
Sbjct: 179 DMVKALGIDINLLYRTVFALGVALAALAGMLAAPISSV--YPGMGSSVLIISFVIVVIGG 236

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+     A  ++         +                     ++ + + +V+L R  
Sbjct: 237 VGSVWGALVAALVIGFADTFGKVLLPDLAG--------------LMVYLVMAVVLLWRPE 282

Query: 338 SLL 340
            + 
Sbjct: 283 GIF 285


>gi|27381555|ref|NP_773084.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354723|dbj|BAC51709.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 308

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 68/326 (20%), Positives = 125/326 (38%), Gaps = 36/326 (11%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  V   L++           Y+  +      + +FA    ++ G  G ++        +
Sbjct: 9   LFFVSLALVVIAATLPLYVSGYVLGLLTVAFYFGVFAMAWDLLFGFAGEVNFGPTFLIGV 68

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  IL +++G S++L I + A+ S   G+++ LP+L+ RG Y  + TL+   + QN 
Sbjct: 69  GAYTAGILNAQFGWSVYLCIVLGALASVIAGLVLALPALRVRGPYFGLTTLVAVLMLQNF 128

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           ++ +  +T G+ G+                      P    I     Y++ LG   +SA+
Sbjct: 129 IVVFADLTGGEIGLT--------------------IPDVISINAGTNYWIALGFMTISAA 168

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           I+  L ++ I    +    +     +L   I+  KL+AF VS+ F G++GA         
Sbjct: 169 ILYGLSQSPIGLVLQASGQDPVQAGALGFNIVKHKLAAFIVSAFFSGLSGALLVFYFGTA 228

Query: 257 SPDMFKFSENIIVISI-VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           S          + + +  +LGG  ++   A     LI   E                   
Sbjct: 229 SVGTVVDVAVGVNVIVSAVLGGRRTVLGAALGAIFLIVAGEFLR---------------P 273

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                T ++     LV+L      L 
Sbjct: 274 TGELATFIVSAVALLVVLFFPGGFLG 299


>gi|239624083|ref|ZP_04667114.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239522114|gb|EEQ61980.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47FAA]
          Length = 331

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/329 (12%), Positives = 92/329 (27%), Gaps = 34/329 (10%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              I   +  V  +L           K I S+     +  +   G++ V+   G + L+ 
Sbjct: 7   RRFISLAMLFVLVILFSATSDYFLQAKNIISIFRDASVIGIIGIGVTYVI-ITGGIELST 65

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
             A A+       +     L IWL++    ++  A G   G    +F           +S
Sbjct: 66  GSALALVGMVMANIYRYTTLPIWLMLAAGILVGLAAGWFNGFIITRFSLPEFIATLSTLS 125

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                  +                        + S        + F      +YYV +  
Sbjct: 126 IYRALTYVIAIKENG----------------IITSQPMKDYRFTVFGGSVGGIYYVTIAF 169

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L+    + L++T        +  N+KA           +++AF +    + +   F  
Sbjct: 170 FVLAVIGQVILKKTRFGTNLYAVGSNKKAAELSGIHTDRTRMAAFVIVGFCVAVGSIFTT 229

Query: 251 ASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           +     +  +    E  ++ ++V+      GG   +         +  +           
Sbjct: 230 SRLQSTTAVLGTGLEFNVIAAVVVGGCALDGGRGDVIGTVIGALFMSVLDNGIYKY---- 285

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILM 334
                            +  + + LV++ 
Sbjct: 286 --------QINTAYQPIIKGVIIILVVVF 306


>gi|163734446|ref|ZP_02141886.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
 gi|161392454|gb|EDQ16783.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
          Length = 306

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/308 (15%), Positives = 107/308 (34%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + A GL+++ G +GL++L     Y IGA++   +    G  +  LI  
Sbjct: 10  VLNGLQFGVMLFLMAAGLTLIFGVMGLINLAHGSLYMIGAFAAAAVAGLTGSFLLALIAA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A  + A  +I  +   +          L  ++    +L  +  I     G       + 
Sbjct: 70  MAAAAMAGVLIETVVIRR----------LYATDHLDQVLATFALILIFSEGTRWVFGSFP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   +   +         + Y ++   ++     +   + L + RT I    R   ++++
Sbjct: 120 LFLDIPDAVSGPVSLPGGIQYPLYRLVLIAVGLGVGLGLALLINRTRIGVQIRAGENDRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+
Sbjct: 180 MIAALGVDISRLYTLVFALGAALAGLAGALVGAIQSV--QVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMR 335
            S+        ++     L        F        + +         + I +  V++ R
Sbjct: 238 GSIKGAFVGALLVGLTDTLGGIFLPELFKLFTDASTATSAGSALASMAIYILMGAVLIWR 297

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 298 PTGLYGAR 305


>gi|86356122|ref|YP_468014.1| fructose ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86280224|gb|ABC89287.1| fructose ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 354

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 92/314 (29%), Gaps = 19/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +   +      G   S   +  +  QI I  +     ++V+ + G + L+  +  
Sbjct: 45  LIVLVLAIIIFGVALGGRFFSSYTLTLILQQIAIVGILGAAQTLVILTAG-IDLSIGVIM 103

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I A     +   YG+   + +    ++ G CG++ G      +                
Sbjct: 104 VISAVIMGNVAITYGIPTPIAVIGGLLVGGLCGLLNGFLVAFMKLPPF------------ 151

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    I      IY A+                 F +SF +    +   ++ M  L 
Sbjct: 152 IVTLGTWNIVMATNFIYSANETIRDADVDAQAPLLHLFAASFRLGTAVLTLGVIAMVLLV 211

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L  TA       + D+ +A            L+ + +S      A         
Sbjct: 212 LLLWYVLNHTAWGRHVYAVGDDPEAAKLSGIQTKKVLLTVYTISGVIAAFAAWVSIGRNG 271

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            ISP       N+  I+  ++GG+       S+        I+  V      +       
Sbjct: 272 SISPSSAVTDYNLQAITATVIGGISLFGGRGSILGTLFGAMIVGVVSMGLNMLGADPQWK 331

Query: 309 LLKFDCSFNMRHTT 322
           +L            
Sbjct: 332 VLLTGVLIIAAVAI 345


>gi|320010756|gb|ADW05606.1| inner-membrane translocator [Streptomyces flavogriseus ATCC 33331]
          Length = 350

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 94/292 (32%), Gaps = 24/292 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    V+  L  +L      S + I  + +   I V+ A G S VV     + L+     
Sbjct: 34  IAGALVLLILGTYLANPLFLSDQGIKDLLLNASILVLLAVGQSAVV-ITRNIDLSVGSVV 92

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A++     +     +  ++ +   I   CG++ G          L +   ++  I  
Sbjct: 93  GLSAFACGTFVAGTDHGVLTVMLLGIAIGVVCGLVSGALVSFGGVPALVVTLGMLYIIQ- 151

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                              D  +  G  + +               + + Y+ L    L 
Sbjct: 152 -----------------GVDYWWAQGEQISASEVPEAVLGLGSGSVLGVPYLPLIALVLL 194

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A+   +LR          I  + +A       I    L+A+A S A  G AGA + A   
Sbjct: 195 AATAYFLRSYRSGRELYAIGSSPEAARLAGIPIRRRVLAAYAFSGAVAGFAGALWLARFG 254

Query: 255 RISPDMFKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            +  D     E      ++V  + I GG  ++   A    +L  +  +   +
Sbjct: 255 TVVADNAHGWELTVVSAVVVGGVAITGGTGTVWGAALGALLLTTIGSVLVVL 306


>gi|238753960|ref|ZP_04615319.1| Ribose transport system permease protein rbsC [Yersinia ruckeri
           ATCC 29473]
 gi|238707712|gb|EEQ00071.1| Ribose transport system permease protein rbsC [Yersinia ruckeri
           ATCC 29473]
          Length = 322

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 97/313 (30%), Gaps = 25/313 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAVVSSLSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  I-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           + GA +  ++G      + +   ++A         + +   K +     +  +++     
Sbjct: 82  LTGAVAASLVGMEMNALVAVGAALAAGAFVGACTGVIVAKGKVQAFIATLVMMLLLRGVT 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +     P+  G                   +   F +        I     L+ + F+S
Sbjct: 142 MVYTNGSPVNTG----------------FTDVADAFGWFGIGRPLGIPTPIWLMAIVFVS 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +L   R  +      +  N+ A      ++   K+  +++      +AG    A   
Sbjct: 186 AWYMLHHTR--LGRYIYALGGNEAATRLSGISVDKVKIIVYSLCGLLAALAGIIEVARLS 243

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++V     + GG   +        IL  +      +    +  +
Sbjct: 244 SAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQM 303

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 304 IVKAVVILLAVLV 316


>gi|170783246|ref|YP_001711580.1| putative sugar transport integral membrane protein [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|169157816|emb|CAQ03021.1| putative sugar transport integral membrane protein [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 354

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/318 (12%), Positives = 98/318 (30%), Gaps = 22/318 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLF-LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           L++Y  +   + +V  +++F L          +  +  Q+ +    A   ++++ + G +
Sbjct: 41  LHRYPAVSPAVVLVLAIIVFGLLNDRFLDPANLSLVTQQVAVVGTLAVAQTLIILTAG-I 99

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+      + +       S+ GL     +    ++  A G   GL   + R     +  
Sbjct: 100 DLSVGAVMVLTSMVIAQTASQNGLPAPAALVAGLVVGLAAGAFNGLLVTRLRLPPFIVTL 159

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
             ++      L+     T    G+ +   L + G T         F    ++    +   
Sbjct: 160 GTLNIFVALTLLYSNGAT--VRGVDMPAALSWTGRTFDLAGVKISFGVVLMLVLYVLVAF 217

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +LG             +TA       + D+++A      ++    +S +  + A + +  
Sbjct: 218 ILG-------------KTAWGRHVYAVGDDKEAARLAGISVNRVLMSVYLAAGAILAVGA 264

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
                  +  SP+         + ++VI      GG  ++        I+          
Sbjct: 265 WIAIGRSNAASPNAGADLNLDSITAVVIGGTSLFGGRGTVWGTLLGALIVGVFRNGLSLA 324

Query: 302 NFYYFNSLLKFDCSFNMR 319
                   L       + 
Sbjct: 325 GLDVLYQTLAVGVLIIVA 342


>gi|294085027|ref|YP_003551787.1| putative high-affinity branched-chain amino acid transport permease
           [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292664602|gb|ADE39703.1| probable high-affinity branched-chain amino acid transport permease
           protein [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 354

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/328 (15%), Positives = 97/328 (29%), Gaps = 24/328 (7%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L      G      Y  S+    ++ V+ A     + G +G  SL  +  + +G Y   
Sbjct: 12  ALGALGIFGPILFPDYTLSIAYLWMM-VLMASTWDTLGGQMGYNSLGNITFFGVGMYVSA 70

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGM----IMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           I+         +    SAM S               +      L    L +        +
Sbjct: 71  IVQISMFYEGGMGEYTSAMGSIKPEFTDNEYFLGLYVGIICAGLVALVLSVIFSSFMFGL 130

Query: 139 KWKPITNGKAGIYVADR---LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +      G  G+ +A     +        S I    FP        F Y +      ++ 
Sbjct: 131 RGPYFAIGSLGLAIAAAEVTITIDYVGGASGISMPLFPGDIEFRSTFFYILCFLFAVVAH 190

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++ WL  T    A   IRD++    ++    +  K   + +++ F+G  GA        
Sbjct: 191 FLLRWLYSTQFGLAINAIRDDEDKAEAMGIPTLIYKQIGWGIAAFFMGCIGAVAGNMAGF 250

Query: 256 ISPDMFKFSENIIVI--SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           I  ++        +   ++V+LGG  +L        +   V E                 
Sbjct: 251 IDKEVAYPIPTFGIFMVAMVLLGGKGTLWGPVLGAILFHVVKETTWTYLL---------- 300

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     + + L + I+     ++ 
Sbjct: 301 ----NLQWIALGLILIINIVYFQQGIMG 324


>gi|27381437|ref|NP_772966.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354605|dbj|BAC51591.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 601

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/316 (12%), Positives = 94/316 (29%), Gaps = 21/316 (6%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             I  L   +    L  F+        + ++  Q   + +   GL+IV+   G + L+  
Sbjct: 34  SAIPFLALALLVFGLGPFVPHFFEWTTLGNLARQFAEFGLIVLGLTIVM-MSGGIDLSVG 92

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +A+     +I  +  G S    +  +  +  +CG + GL     R        + +  
Sbjct: 93  SVFALSVLMSLIGMNVEGWSAGTGLIATLAVGASCGALNGLLVGYVRMRAFLTTLVTLII 152

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                                     F    V ++     F               L   
Sbjct: 153 FRSLF---------------EIVFPEFSTAIVTNMSDSAAFEYLGTANIGLAPVSFLITA 197

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            ++  + + L RT        +   +++ ++    + +   SA+   S  + ++G  FA+
Sbjct: 198 AIAIGVHVVLSRTRYGWHLLAVGGARRSAYNAGINVRWTIFSAYVCCSTLVALSGFLFAS 257

Query: 252 SRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                + D+    E   + + V+      GG  ++SK       ++ +      +     
Sbjct: 258 RIGSAASDVGAGLELQALTATVLGGISLGGGRGTVSKAIMGAVFVLLLSNSFLALAISGP 317

Query: 307 NSLLKFDCSFNMRHTT 322
            + L            
Sbjct: 318 GADLVLGLILVAAVFL 333


>gi|311114087|ref|YP_003985308.1| ribose ABC transporter membrane protein [Gardnerella vaginalis ATCC
           14019]
 gi|310945581|gb|ADP38285.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Gardnerella vaginalis ATCC 14019]
          Length = 345

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/310 (16%), Positives = 92/310 (29%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++    L     A  +   I ++GIQ     + A+G + V+ S G + L+     
Sbjct: 46  ALIGLIILCAALSCATPAFLTSVNILNVGIQAATVAILAFGQTFVIVSAG-IDLSVGAVA 104

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AI +      G+  GL   L I +        G+I G+ +   +         +MS    
Sbjct: 105 AISSMLVAYTGASMGLPPILTIIIGVATGAVFGLISGVANAFLKLPSFIATLAMMSVARG 164

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+         +G+         G  +                       ++ M  + 
Sbjct: 165 LTLVVSDGRPISTSGMVNFFGATICGIPMP----------------------IVMMIIMG 202

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L  T    +   +  N +A       I   ++  F +S  F  +AG   A    
Sbjct: 203 VISAIILNFTTTGRSMYAVGGNMEASRLSGINIHKTQIMVFILSGVFAAVAGLVIAGRLH 262

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + S+VI      GG   +S       +L  +      +N   F   
Sbjct: 263 SAQPQAATGYEMDAIASVVIGGASLSGGKGKISGTFVGAILLAVIRNGLNILNVSSFWQQ 322

Query: 310 LKFDCSFNMR 319
           +         
Sbjct: 323 VVIGLVIAFA 332


>gi|254708356|ref|ZP_05170184.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10]
          Length = 208

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 62/206 (30%), Gaps = 14/206 (6%)

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           LI    ++   +      +        + L   +    S V   +    V++    L   
Sbjct: 11  LITAIGMSIALSNFVQVTQGPRNKPVPQLLNGSYELFGSGVTISLKQIVVIVVTAILLTI 70

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               + RT++  A R    ++K    L   +       F + +    +AG  + +    I
Sbjct: 71  FWYVVNRTSLGRAQRACEQDRKMAALLGINVDRVISLTFVMGAMLAAVAGTLYLSFYGVI 130

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           S     F   +   +  +LGG+ SL        ++  +  L        +  +  F    
Sbjct: 131 SF-ADGFIPGVKAFTAAVLGGIGSLPGAVVGGLLIGLIEALWSAYFSIDYKDVAAFS--- 186

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
                      L +V++     +L  
Sbjct: 187 ----------ILAIVLIFMPSGILGR 202


>gi|260222165|emb|CBA31458.1| hypothetical protein Csp_F37630 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 277

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 81/286 (28%), Gaps = 15/286 (5%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           + G + +++L     Y + AY         G   W L    A  +    ++      +  
Sbjct: 1   MFGIMDMVNLAHGSLYMVAAYLIATATQASGSFWWGLAAGVAGTAFFGVLLEVSVLRRLY 60

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
                   L    I        + I   +               +               
Sbjct: 61  RRDHVTQVLGTFAILLMCNETVRMIWGSQPLSLNPPAALSGPVELLP----------GFF 110

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
           Y  F   +++     +  + L + RT +    R    N+    ++ T +     + F + 
Sbjct: 111 YPAFRLLIIVVGLATALLLYLLVTRTRLGMQVRAGASNRDMALAMGTNVQRLFTAVFGLG 170

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           +A   +AG                 S  I+   ++++GG+ S+        ++  V    
Sbjct: 171 AALCALAGGMLGPLLAV--QVGMGESILILAFVVIVIGGIGSIRGALVGALLVGMVDSGG 228

Query: 299 CGMNFYYFNSLLKFDCSFNMRHT---TLMVIALFLVILMRSHSLLR 341
             +    F SL     + +        L+ + +  V+  +   L  
Sbjct: 229 RTLLPMVFESLFGAALAADAAPAVASILIYVLMAAVLFFKPRGLFP 274


>gi|86748705|ref|YP_485201.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86571733|gb|ABD06290.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 288

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 93/304 (30%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       ++  + A GL++ +G +  ++L        G Y   +L +  G   +  +P+
Sbjct: 7   LFDGVAYGMLLFVLACGLAVTLGLMNFVNLAHGAFAMAGGYVCAVLVNTSGWPFFAALPI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + S   G +      +   D   +  ++ S     + +       G +          
Sbjct: 67  AFLASALIGAVFERLLYRHLYDRSHLDQVLFSVGLVFMSVAAVDFIMGSS---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                       +     +    +   +++    L+ ++ L L +T   +  R   D+ +
Sbjct: 117 RIFIKLPDALQGQIDLFGIGIGRYRLMIIVICGLLTVALQLTLAKTRFGSRLRAAVDDPR 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       FA      G  GA  A          F     I  + +V +GG 
Sbjct: 177 VAAGLGINVPQVFALTFAFGCGLAGFGGALSAEILGL--DPYFPLKFMIYFLIVVTVGGS 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S++    A+ +L                               ++   + ++++ R + 
Sbjct: 235 SSITGPFLASLLLGIGDVAGKYYFPKLGP--------------FVIYTIMIVILIWRPNG 280

Query: 339 LLRL 342
           L   
Sbjct: 281 LFGR 284


>gi|303246980|ref|ZP_07333256.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
 gi|302491687|gb|EFL51570.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
          Length = 307

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 53/313 (16%), Positives = 102/313 (32%), Gaps = 17/313 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           + I +       Y + A G  +V G L L++      + +GAY    + +       L+ 
Sbjct: 7   QNILNALQWGSFYSLIALGYCLVYGVLLLINFAHGDIFMVGAYIAFFVCTFLLGKFGLIP 66

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLA---IATLIMSEIFQNILIKWKPITNGKAGIYVA 153
            +   +     + + +      G  L       L    + +  ++    +          
Sbjct: 67  GLPGWLVMTLAVPLTMILTAVVGVTLERVAYRPLRRKGVNRLYVVITALMCGLILENGNL 126

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             L     +  +LI    +    V        V+         +   + RT I  A R I
Sbjct: 127 ALLGASRKSFPTLIPTHVYHVFGVAVTNIKLMVIGVAILGFLLLQFIVTRTKIGMAMRAI 186

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             ++ A   +   +    +  F + SAF G+AG FFA +   + P M         I+ V
Sbjct: 187 SYDRFAVPLMGIPVDTVIVFTFVLGSAFAGLAGIFFAMTYPVLDPYMGALIGWKAFIAAV 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           + GG+ S++       +L  V  +        F  L+ F               L L++ 
Sbjct: 247 V-GGIGSITGAFAGGFLLGFVEIMVVAFFPSTFRDLIAFS-------------ILLLILA 292

Query: 334 MRSHSLLRLRTPS 346
           +R   L  +   +
Sbjct: 293 IRPTGLFGVAKST 305


>gi|218671992|ref|ZP_03521661.1| urea or short-chain amide ABC transporter, permease protein
           [Rhizobium etli GR56]
          Length = 222

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 55/180 (30%), Gaps = 14/180 (7%)

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +        F          ++        LS +I   + R+        +RD +     
Sbjct: 25  MTDFKDILGFNIQADGTRASLFAATAIFLALSLTIASAIVRSKFGKVLVGVRDAESRTRF 84

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   +   KL  F VS+   G+AGA +      I+P  F  + +I V+    +GG  +L 
Sbjct: 85  LGYRVEHFKLFTFVVSAMMAGIAGALYVPQVGIINPGEFAPANSIEVVIWTAVGGRGTLI 144

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  ++ G   +  G+              F       +      V L     ++  
Sbjct: 145 GPIIGAILVNGGKTIFTGL--------------FPEFWLFALGGLFVAVTLFLPRGVVGT 190


>gi|99082076|ref|YP_614230.1| inner-membrane translocator [Ruegeria sp. TM1040]
 gi|99038356|gb|ABF64968.1| inner-membrane translocator [Ruegeria sp. TM1040]
          Length = 306

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 107/308 (34%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + A GL+++ G +GL++L     Y +GA++   +    G  +  LI  
Sbjct: 10  VLNGLQSGVMLFLMAAGLTLIFGVMGLINLAHGSLYMVGAFAAAAVAGVTGSFVLALIAA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A  + A  +I      +              +    +L  +  I     G       + 
Sbjct: 70  LAAAALAGAVIEVAVIRRLYDS----------DHLDQVLATFALILIFSEGTRWVFGSFP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   +   +         + Y ++   ++     ++  + L + RT I    R   ++++
Sbjct: 120 LFLDIPDALSGPVTLPGGIQYPLYRLALIGVGLLVAFGLWLLIERTRIGIQIRAGENDRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+
Sbjct: 180 MIAALGVDISKLYTLVFALGAALAGLAGALVGAIQSV--QVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL---MVIALFLVILMR 335
            S+        ++     L            +    + +   +     + I + LV++ R
Sbjct: 238 GSIKGAFIGALLVGLTDTLVGIFLPEVLKLFMDAAPATSAGSSIASMSIYILMSLVLVWR 297

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 298 PSGLFGAR 305


>gi|282865879|ref|ZP_06274928.1| inner-membrane translocator [Streptomyces sp. ACTE]
 gi|282559203|gb|EFB64756.1| inner-membrane translocator [Streptomyces sp. ACTE]
          Length = 352

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/305 (16%), Positives = 97/305 (31%), Gaps = 24/305 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           S+        +  +    V+  L  +L      S + I  + +   I V+ A G S VV 
Sbjct: 23  SLVDAVFRAREISIAGALVLLVLGTWLANPRFLSDQGIKDLLLNASILVLLAVGQSAVV- 81

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
               + L+      + A++     +     +  ++ +   I   CG++ G      +   
Sbjct: 82  VTRNIDLSVGSVVGLSAFACGKFVAGTDHGVLTVMLLGVAIGVVCGLVSGALVSFGKVPA 141

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           L +   ++  I                     D  +  G  + +               +
Sbjct: 142 LVVTLGMLYIIQ------------------GVDYWWARGEQISAADVPGAVLGLGSGSVL 183

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            + Y+ L    L A+   +LR          I  + +A       I    L+A+A S A 
Sbjct: 184 GVPYLPLIAVALLAATAYYLRSYRSGRELYAIGSSPEAARLAGIPIRRRVLAAYAFSGAV 243

Query: 242 IGMAGAFFAASRDRISPDMFKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVE 296
            G AGA + A    +  D     E      ++V  + I GG  ++   A    +L  +  
Sbjct: 244 AGFAGALWLARFGTVVADNAHGWELTVVSAVVVGGVAITGGTGTVWGAALGALLLTTIGS 303

Query: 297 LCCGM 301
               +
Sbjct: 304 ALVVL 308


>gi|225389094|ref|ZP_03758818.1| hypothetical protein CLOSTASPAR_02840 [Clostridium asparagiforme
           DSM 15981]
 gi|225044846|gb|EEG55092.1| hypothetical protein CLOSTASPAR_02840 [Clostridium asparagiforme
           DSM 15981]
          Length = 217

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 56/172 (32%), Gaps = 14/172 (8%)

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                +         +L    +  ++  ++ +T +  A   + ++  A   +   +    
Sbjct: 55  LAGGALSISAVTIITILTCVVVMVALTSFINKTKMGQAMLAVSEDNGAATLMGINVNGTI 114

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              FA+ SA   +AG  + ++   +SP        I      + GG+ S+        IL
Sbjct: 115 ALTFAIGSALAAVAGVLYCSAYPNLSPYT-GAMPGIKAFVAAVFGGIGSIPGAFIGGIIL 173

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
             +  L         +               ++   L +V+L+R   +L  +
Sbjct: 174 GVIEALSKAYISSQLSDA-------------IVFAVLIVVLLVRPTGILGKK 212


>gi|146343653|ref|YP_001208701.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. ORS278]
 gi|146196459|emb|CAL80486.1| Putative branched-chain amino acid ABC transporter, permease
           protein [Bradyrhizobium sp. ORS278]
          Length = 378

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/355 (12%), Positives = 98/355 (27%), Gaps = 36/355 (10%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           +++     L+  V  LLL + +       +  ++  + L Y   A GL +  G  G+LSL
Sbjct: 4   SRFFNRSELIGFVSLLLLLVVILPLALDIFRLNLVAKYLTYSFVAIGLVLCWGFGGILSL 63

Query: 69  NCVIAYAIGAYSYVIL------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
              + + +G Y   +                       +                     
Sbjct: 64  GQGVFFGLGGYCMAMFLKLEASSVENTKIQSTPGIPDFMDWNQLTALPFFWKPFASFPFA 123

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI--------- 167
                L  A             +   +        +A  +  L    +            
Sbjct: 124 LAAIILVPAIFSFIIGAAMFKRRVGGVYFAIITQAIAAIMTILIVGQQGYTGGINGITDL 183

Query: 168 -RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                +       +  +Y+V +   F +  +  ++R T +      +R+ +        +
Sbjct: 184 RTLHGWDIRTDHAKYILYFVEVFFLFAAILVAQFIRLTKLGRILVAMREQEDRVRFSGYS 243

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +   K+ AF  ++ F  + GA F      +SP       +I ++    +GG  S+     
Sbjct: 244 VANFKIFAFCAAAVFAAVGGALFTLEVGFMSPSFVGIVPSIEMVIYTAVGGRLSIFGAVY 303

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            + ++                       +F       +      V+L   + L  
Sbjct: 304 GSLLVNFAKTSLSE--------------TFPQLWLFGLGALFIAVVLAFPNGLAG 344


>gi|84516229|ref|ZP_01003589.1| ABC branched-chain amino acid transporter family, inner membrane
           subunit [Loktanella vestfoldensis SKA53]
 gi|84509925|gb|EAQ06382.1| ABC branched-chain amino acid transporter family, inner membrane
           subunit [Loktanella vestfoldensis SKA53]
          Length = 336

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/328 (9%), Positives = 82/328 (25%), Gaps = 19/328 (5%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---------AYSYVI 83
             +   I           + A G++++ G L   +       A G         A     
Sbjct: 9   VLANFVIVPGLAYGAQLALGALGVTLIYGILRFSNFAHGDTMAFGTAITIIGTNALIAAG 68

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           +      +  + +P+    +    +       KF     A   +++      + I    +
Sbjct: 69  ITFGPLPTALIALPLGIAATCLLVLGTDWTVYKFYRTKKAAPVILVIVSMGVMFIMNGIV 128

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
                   +               R     +  +         ++      A +  +L +
Sbjct: 129 RFIIGVGDINFADGERFVVTARGFREATGLAEGLAIRTTQVITVIVALIAMALLFWFLNK 188

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T    + R   DN+           +     + + +A    AG  +   +         F
Sbjct: 189 TRTGKSMRAFSDNEDLALLSGINPDWVVKVTWMIVAALATTAGVLYGLDKSF--KAFTYF 246

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSLLKFDCS 315
              + + +  I+GG+ S         ++             +   +              
Sbjct: 247 QLLLPIFAAAIVGGLGSPLGAIAGGFVIAFSEVTVTYAWKRVLGYILPENLAPEALVQLM 306

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLR 343
                  +    L +V+L +   L + +
Sbjct: 307 STDYKFAVSFAILIVVLLFKPTGLFKGK 334


>gi|241762745|ref|ZP_04760809.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
 gi|241368164|gb|EER62356.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
          Length = 306

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 80/305 (26%), Gaps = 20/305 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY----GLSIWLLIPV 98
                IY + A G +I   +   L+         GA+  V +             L   V
Sbjct: 13  LALGSIYALVAVGFNITFNTTKTLNFGQGEFLVAGAFVAVSVLLLLVGKQMTDALLPADV 72

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +        +                A            +                    
Sbjct: 73  TLARYLLSLVATMAVLALLGVVLYYAAVRPFVGQGGMAWVMSTIGFGIIIQNTALAIWGP 132

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + S +                  VL+    +  ++   +RRT +  A R +  +  
Sbjct: 133 SPLVMPSPLGNDVIRIGGAGVLPQEVLVLVASLAVLLTLDWVMRRTRLGKAVRAVAQSGN 192

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    + AF VSS+  G+AG   A             +  +   S  ILGG+
Sbjct: 193 AATLMGINVNAIVVLAFVVSSSLAGLAGLLIAPITTA--SVFMGMTLALKAFSSAILGGL 250

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS         +L  +  L                          M + + +V+++R   
Sbjct: 251 TSPRGCMLGGILLGVIEALV--------------GLWHAELREISMFLLIIVVLVVRPQG 296

Query: 339 LLRLR 343
           LL  R
Sbjct: 297 LLGQR 301


>gi|170690165|ref|ZP_02881332.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
 gi|170144600|gb|EDT12761.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
          Length = 354

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 97/310 (31%), Gaps = 23/310 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++ ++  +   L      + + +  + + + I  +   G+++V+  +  + L+     
Sbjct: 41  LFVVLILLIVGTALARPQFLNLQNLRDVLLNVSIISLLTAGMTVVI-LMRHIDLSVGSTV 99

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I AY+   L   +     ++   + +  G     +    +        +ATL    IF+
Sbjct: 100 GISAYAVGSLYVAFPQMPVIVALAAGLAIGLVAGGINALLVAVGRVPSLVATLSTLYIFR 159

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                W                        SL   +   ++   + I    ++  +  L+
Sbjct: 160 GADYAWVH---------------GGQINATSLPEAYSRLATGTFFGIPTLALIAAVVLLA 204

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +I L   R         I  N +A       +    ++ F +S A  G AGA + A   
Sbjct: 205 LAIYLKQFRG--GREHYAIGSNPEAARLAGVNVERRVMAGFLLSGAIAGFAGALWLARFG 262

Query: 255 RISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +          +     +V S+ I GG+ ++        +L  +      ++   F   
Sbjct: 263 TVDASTAKGIELQVVAAAVVGSVAITGGVGTILGATLGALVLGVISIALVVLHVSPFWEQ 322

Query: 310 LKFDCSFNMR 319
                     
Sbjct: 323 AIEGALIVAA 332


>gi|167769888|ref|ZP_02441941.1| hypothetical protein ANACOL_01229 [Anaerotruncus colihominis DSM
           17241]
 gi|167667879|gb|EDS12009.1| hypothetical protein ANACOL_01229 [Anaerotruncus colihominis DSM
           17241]
          Length = 336

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/309 (13%), Positives = 92/309 (29%), Gaps = 26/309 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M++    L   +    L  V   +++ L   +  S + I ++    ++Y++ A G++  +
Sbjct: 1   MNLLKKALKAREATSALFLVALFVIVSLLNPSFASSENIAAVFNSAVVYILIAVGMAFAI 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
             +G + ++        A     L                + +                 
Sbjct: 61  -IVGEIDVSVGSCLGFVATVVGSLLRDGCNWPLAFAVGILIGAAVG-------------- 105

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
                 LI       + +     T G  G+       + G      +       S     
Sbjct: 106 ------LINGWGVAVMGVPSLIFTLGVNGVLRGAMYIYSGGAWVENLPKAFKDFSSATLA 159

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             +         L  ++ L L RT     +  + DN      +  + +  K+ A+ +   
Sbjct: 160 GRLTVYFCCAFLLVVAVHLLLTRTKKGRYFTAVGDNAGGATLVGISPVRTKVIAYVICGI 219

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVV 295
              +AG  F +    ++       E   V + V     + GG+ S+   A    I+  + 
Sbjct: 220 MAAIAGIIFCSRIGFVTSTSGNGYEMKAVAACVLGGISLTGGVGSVLGAAIGAVIMSSIS 279

Query: 296 ELCCGMNFY 304
            L   M F 
Sbjct: 280 YLLVFMGFS 288


>gi|323358442|ref|YP_004224838.1| ribose/xylose/arabinose/galactoside ABC transporters, permease
           components [Microbacterium testaceum StLB037]
 gi|323274813|dbj|BAJ74958.1| ribose/xylose/arabinose/galactoside ABC-type transport systems,
           permease components [Microbacterium testaceum StLB037]
          Length = 344

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/319 (12%), Positives = 94/319 (29%), Gaps = 23/319 (7%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +   I+  L ++  +          S      + +   + ++ A G +IV+     + L
Sbjct: 24  ARESGIVLALVLIVVIATLNNPTFLFSPDGFRDLLLTPSLLLLVAVGQAIVI-VTRNVDL 82

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +      + AY    L         +++ ++ ++ G    ++    + +      + TL 
Sbjct: 83  SVGSVVGLTAYLTGRLFIDVPGLPLVVVFLAGIVVGGILGLINGALVAYAKVPALVITLG 142

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
              I++ I + W                      V +      F        + +  + +
Sbjct: 143 TMYIYRGINVAWAGSNR-----------------VNASDLPGSFRDLGTGQVLGIPILTI 185

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
               +      +LR          I  +  A       +    + AF  S A  G+AG  
Sbjct: 186 LAVVVLIGAAWYLRNLRSGRELYAIGSDPAAAHLYGLKVNRRIIGAFVTSGALAGLAGVL 245

Query: 249 FAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           +AA    ++ +     E   + + V     I GG+ S+   A    +L+ +      +  
Sbjct: 246 YAARYGTVASNAGFGWELQAIGAAVIGGVAISGGVGSVWGAAIGAYLLLTINRALPILGI 305

Query: 304 YYFNSLLKFDCSFNMRHTT 322
             F                
Sbjct: 306 DDFWQRAVVGALILGAIVL 324


>gi|84502141|ref|ZP_01000289.1| branched-chain amino acid ABC transporter permease protein
           [Oceanicola batsensis HTCC2597]
 gi|84389501|gb|EAQ02220.1| branched-chain amino acid ABC transporter permease protein
           [Oceanicola batsensis HTCC2597]
          Length = 305

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 84/304 (27%), Gaps = 15/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +YV  A   ++ +G L  L+      + +       L              
Sbjct: 7   LVNSLMLGSVYVTVAVAFTLTIGILNFLNFTIPTLFMLAGMVGWALSYWGIPFGLSGPLP 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD-RLY 157
             +      +   + SL               +  ++ +     +        +      
Sbjct: 67  WPLALAMGIVAAIVVSLIVERFTFRYLKTKYGDSTEHAIPLVSSLGFLLIVENLVRIGYG 126

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                              ++  I     L+    +   ++  ++R+ I    R I +N 
Sbjct: 127 TEARRFEGPDANMTMDVGGILIRIPQLVSLIITILIVIGLVQMMKRSRIGRGLRAIAENP 186

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A   L           F ++    G+AGA FA +   +   M         I+ +++GG
Sbjct: 187 DAANILGIDTKRIVPVVFMLTGMLCGLAGALFAVNYGEV-APMMGEDIGAKAIAGMVIGG 245

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+         +  +  +           ++ +              AL +V++    
Sbjct: 246 LGSIWGAVLGGLCVGLLELMTVHFFGADTVQIVVWG-------------ALLIVLIAYPK 292

Query: 338 SLLR 341
            LL 
Sbjct: 293 GLLG 296


>gi|296134339|ref|YP_003641586.1| inner-membrane translocator [Thermincola sp. JR]
 gi|296032917|gb|ADG83685.1| inner-membrane translocator [Thermincola potens JR]
          Length = 303

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 84/257 (32%), Gaps = 25/257 (9%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           + I +   +M    +++V G  G L L       IGAY+ V L   Y L   + IP + +
Sbjct: 5   LLINLGANLMLVLAINLVTGLSGQLFLGYSGLMGIGAYTAVSLAHYYHLPPAVTIPAAGI 64

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            + A G  +     +     +A+ +LI  ++  ++L                        
Sbjct: 65  TAMAIGCAVFSQLTRLPSILMAVVSLIFVQVTASLLS----------------------- 101

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
              +    F            +   +     L   +   +  +        IR+ +    
Sbjct: 102 --IAPAPAFTASIDAAQASTILTVAMAITIALEVFVCHLVEHSRFGRGLIAIREEEFLAE 159

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
            L    I  ++ A A    F G+AG ++AA         +     + +++   +GG+ S 
Sbjct: 160 LLGINKIGYQVQALATGCLFAGLAGGYYAAFTGSYQAADWGLLRTLEIVAAAFMGGLGSR 219

Query: 282 SKIAKATAILIGVVELC 298
             I   T I+       
Sbjct: 220 RGIFAGTVIITLTSGFV 236


>gi|116249153|ref|YP_764994.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253803|emb|CAK12198.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 345

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 115/336 (34%), Gaps = 34/336 (10%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L  +  +L+ L                 + IYV+ A   + + G  GL+S+   + + 
Sbjct: 23  VALGCMAAVLVLLMFAPAVLGAGAIDRMTALFIYVILAAMWNALAGFGGLVSVGQQVFFG 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY   I  +  GL+ ++ +  +A+++GA  + + L  L+ +G   AI    +     +
Sbjct: 83  LGAYFT-IRLADAGLNPFVSLFAAAIVTGALSIPLSLFMLRLKGGEFAIGMW-VIAELAH 140

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L+    +  G+ G  +     +                        +Y++ L       
Sbjct: 141 LLVNLDRLIQGETGTSLISLNVY----------------DGATRRATIYWLALTAMAALL 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF-AASRD 254
             +  L R+    A + IRDN++A  S+   +I  K   F +++  I +AG  + A +  
Sbjct: 185 GALFMLMRSRAGAAMQAIRDNEEAATSVGVRVIATKRLLFVLAAFGIAVAGGLWLATATT 244

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                 F       +I +V++GG+           +   +  +                 
Sbjct: 245 FQPKTYFSVQWTAYMIFMVLVGGIGKFEGAILGAILFFVIETVFGS-------------- 290

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              + +   +     +  L     L          +
Sbjct: 291 -AGVWYLIGLGATAVIFSLYLPRGLWGEIERRFDFQ 325


>gi|254712713|ref|ZP_05174524.1| hypothetical protein BcetM6_04971 [Brucella ceti M644/93/1]
 gi|254715783|ref|ZP_05177594.1| hypothetical protein BcetM_04981 [Brucella ceti M13/05/1]
 gi|261217547|ref|ZP_05931828.1| inner-membrane translocator [Brucella ceti M13/05/1]
 gi|261320422|ref|ZP_05959619.1| inner-membrane translocator [Brucella ceti M644/93/1]
 gi|260922636|gb|EEX89204.1| inner-membrane translocator [Brucella ceti M13/05/1]
 gi|261293112|gb|EEX96608.1| inner-membrane translocator [Brucella ceti M644/93/1]
          Length = 295

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 54/318 (16%), Positives = 114/318 (35%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           +++   +        +    I    Y M + GL+I+ G L +++      Y +GA+   +
Sbjct: 1   MVMIFGIPLQALLGQLLVGLINGSFYAMLSLGLAIIFGLLRIINFAHGAQYMLGAFVGYL 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L S  G+S W  + ++ +I G  G I+   +L    +   +  L+ +     ++      
Sbjct: 61  LLSWLGISYWPALVLALLIVGLGGAIIERVALSRLYNLDPLYGLLFTFGLALVIEGTFRY 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G AG   A      G               F+    +  +V++   F+     L + +
Sbjct: 121 YYGAAGQPYAVPPSLAG----------GRNLGFMFLPNYRAWVVVASLFVCLGTWLLIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N     +    +       +A+ SA  G+AG   A         +   
Sbjct: 171 TKLGAYLRAATENPTLVKAFGINVPLLLTFTYALGSALAGLAGIMAAPIYQV--SPLMGS 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  I+V ++V++GGM S+        +L     L                  +    + +
Sbjct: 229 NIIIVVFAVVVVGGMGSILGAIITGYVLGIAEGLTKVF--------------YPEASSIV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           + + + +V+L+R   L  
Sbjct: 275 VFVIMAIVLLVRPAGLFG 292


>gi|254485568|ref|ZP_05098773.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. GAI101]
 gi|214042437|gb|EEB83075.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. GAI101]
          Length = 434

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 98/274 (35%), Gaps = 21/274 (7%)

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + L  PV  + +     ++G  +L  R DYLAIATL ++EI   +L     ++ G   +
Sbjct: 161 PVILAWPVGGLFAAGAAWLIGKTALGLRSDYLAIATLGIAEIIIAVLKNEDWLSRGVKNV 220

Query: 151 YVADRLYFLGTTVRSLIRF---------FRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               R       +++   F             +S +  ++    +  G+  L   +    
Sbjct: 221 IGIPRPVPYEIDLQNNAGFVERAAGFGLDPVEASTLWVKVLYVALFAGVLVLLLWLSQRA 280

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +      R IRDN+ A  ++   +    L  F + SA  G+AGA       +++P  +
Sbjct: 281 LNSPWGRMLRAIRDNEVAAEAMGKDVTARHLQVFILGSAICGIAGAMMTTLDSQLTPGSY 340

Query: 262 KFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK--------- 311
           +      ++  +VI+GG  +         ++  +  +   M  +  + +           
Sbjct: 341 QPLRFTFLIWVMVIVGGSGNNFGAVLGGFLMWYLWVMVEPMGLWLMHLVTSGMPDGYWLK 400

Query: 312 --FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                S        M   L LV+      L+  +
Sbjct: 401 DHLIESAAHMRLMTMGAVLLLVLRFSPRGLIPEK 434



 Score = 37.2 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 34/88 (38%), Gaps = 2/88 (2%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L A++  L++F     + +      +    LI  + A G+++  G  GL ++  +   A
Sbjct: 9   ALFAIIAGLIVFTGFQQSWNAA--LLIISMGLISSIMALGVNLQWGFAGLFNVGIMGFVA 66

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           +G  + V++        W         +
Sbjct: 67  LGGLAAVLISMPPTEGAWSAGGWGVAGA 94


>gi|83310770|ref|YP_421034.1| branched chain amino acid ABC transporter permease
           [Magnetospirillum magneticum AMB-1]
 gi|82945611|dbj|BAE50475.1| Branched-chain amino acid ABC-type transport system, permease
           components [Magnetospirillum magneticum AMB-1]
          Length = 311

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 92/307 (29%), Gaps = 27/307 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ S      IY +   G +I+  +  +++        IG  +   + +   + I+L I
Sbjct: 27  QYLFSGLTSGAIYALAGLGFAIIYNASHVINFAQGEFIMIGGMATATMVAAG-VPIYLAI 85

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++   S   G+ M   +++   +   +  +I++      +     +             
Sbjct: 86  PLAMAASMLVGVAMEKFAIEPARNADVVTIIIITIGASIFMRGAAQLIW----------- 134

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                ++ +                   +V        A +  +  RT    A      N
Sbjct: 135 DKEFHSLPAFSGETPIAVMGATLMPQSLWVFGISAVAIALLWYFFNRTMFGKAMLGTSHN 194

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +    L++FA+S+    + G          +         +   S  +LG
Sbjct: 195 RLAAQLVGVAVKRVLLASFALSALLGAVGGIVVTP--ITFTNYEAGIMLGLKGFSAAVLG 252

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ + +       I+     +  G     +   + F             I +  V+    
Sbjct: 253 GLGNGTGAIIGGLIVGIAEAMASGYLSSAYKDAIAF-------------IIILFVLFFMP 299

Query: 337 HSLLRLR 343
             L   R
Sbjct: 300 SGLFGKR 306


>gi|319796336|ref|YP_004157976.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315598799|gb|ADU39865.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 309

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 97/305 (31%), Gaps = 16/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y + A G  ++  + G+ +          A +       + L       + A I
Sbjct: 12  LMVGMLYSLIAIGFVLIYKASGVFNFAQGAMVLFAALAMARFSEWFPLWFGFQSLILANI 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN----GKAGIYVADRLYF 158
                 +  +  + +  + LA++ L+  E    ++            G+           
Sbjct: 72  LAFIAAMAVMVVVAWLIERLALSKLVNQEGITLLMATLGIAYFLDGVGQTIFGNDIYKID 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G     L+         ++              L   + ++ ++TA   A R + D+ +
Sbjct: 132 VGMPKEPLMVLEGTFPGGLLLSQEDLVAAAVSAALVVVLAIFFQKTATGRALRAVADDHQ 191

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +    +  ++V+     +AG  + +               +  + +VILGG+
Sbjct: 192 AAQSIGIPLKRIWVIVWSVAGFSALVAGIIWGSKLGVQFSLS---LVALKALPVVILGGL 248

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        ++    +L            ++   +          +   + +L+R   
Sbjct: 249 TSIPGAIIGGLLIGVGEKLSEIYLGPMLGGGIEIWFA---------YVLALVFLLVRPQG 299

Query: 339 LLRLR 343
           L   +
Sbjct: 300 LFGEK 304


>gi|317050156|ref|YP_004117804.1| inner-membrane translocator [Pantoea sp. At-9b]
 gi|316951773|gb|ADU71248.1| inner-membrane translocator [Pantoea sp. At-9b]
          Length = 323

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 87/312 (27%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 24  LIALIVLIAVVASLSPNFFTVANLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +   G+   + +                     
Sbjct: 83  LTGAVAASIVGHEVNALVAVAASLALGAAIGGITGTIVARGKVQ--------AFIATLVM 134

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L+          G         + T        F +        I     L+ + F  A
Sbjct: 135 MLLLRGVTMVYTDG-------SPINTGFSDNADLFGWFGIGRPLGIPTPVWLMAVVFGLA 187

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A       +   K+  +++      +AG    A    
Sbjct: 188 WYMLHHTR--LGRYIYALGGNEAATRLSGINVNRVKIIVYSLCGMLAALAGTIEVARLSS 245

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 246 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIMGTLIGALILGFLNNGLNLLGVSSYYQMI 305

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 306 VKAVVILLAVLV 317


>gi|126463709|ref|YP_001044823.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
 gi|126105373|gb|ABN78051.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
          Length = 292

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 92/304 (30%), Gaps = 30/304 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   +  + A GLS+V G L ++++     + +GA +   +         L   V+ ++
Sbjct: 15  LVGAAVLALTASGLSLVFGVLRVVNVAHGEFFMLGAVAAWFVSQWVPGPPALAFAVALVV 74

Query: 103 SGACGMIMGLPSLKF---RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                  +   + +    R  Y   AT+I +     IL +      G     V       
Sbjct: 75  CPLLVAGLAALADRLVLKRLAYEPEATIIATIGLLYILQQAALTLYGPEARPVPPPFE-- 132

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                      R    +  +  +   V+     + A + L L R+ I    R  + +++ 
Sbjct: 133 ----------ARLQLPWFGWSGYKLSVIGAAGAVLAGLWLLLARSRIGLVMRATQIDRET 182

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +    +       FA+ +A   +A       +      +      ++   +V++GG+ 
Sbjct: 183 ASAFGIDVDRVYAGTFALGAALAAIAAVLIVPIQQA--HYLMGGDPLLLSFIVVVIGGLG 240

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           SL     A  ++     +           +L       +                R   L
Sbjct: 241 SLRGTLVAALLIGVSDGVISTFFEPTLAKILATLLVALVLV-------------FRPQGL 287

Query: 340 LRLR 343
              R
Sbjct: 288 FGAR 291


>gi|302339518|ref|YP_003804724.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
 gi|301636703|gb|ADK82130.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
          Length = 343

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 91/312 (29%), Gaps = 22/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L   +  + + +      +     ++  Q  I  M + G+ +V+ + G + L+     A
Sbjct: 26  LLALFILGIAMGIATPKFVNYYNFMNILKQTSINFMISAGMLVVLITAG-IDLSVGSTTA 84

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +      +L      ++ +LI  +  ++ A G I G+   K    +  ++TL    I   
Sbjct: 85  LATCIMGVLVKSGVHNVCILIVSAMAVAIAVGYINGILLTKLHLPHPFVSTLGTRSIVLG 144

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +                               + +  +  
Sbjct: 145 VAL----------------LITDATPIGFINKDVDSLLLLGSKTIFGFPISFIAVIIVVV 188

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              ++L +T +      +  N +A              A+ +S A  G+AG   A     
Sbjct: 189 IYHIFLNKTMLGRQLYCVGGNPEAARLSGINSDKVLTIAYTISGAMTGIAGIIMAGRVST 248

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            S       +   + S +I     +GG  ++  +   + ++  +      +        +
Sbjct: 249 ASATAGATFDMDSIASCIIGGASFMGGKGTIFGVLIGSLLISTIRNGLNLLGAQNDIQYI 308

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 309 VIGAVIIVAVLI 320


>gi|254511400|ref|ZP_05123467.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacteraceae bacterium KLH11]
 gi|221535111|gb|EEE38099.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacteraceae bacterium KLH11]
          Length = 437

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 97/288 (33%), Gaps = 24/288 (8%)

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +         L + L  P   +++     ++G  +L  R DYLAIATL ++EI   +L  
Sbjct: 150 AIAGHLGGLNLPVLLAWPAGGLLAAGAAWLIGKTALGLRSDYLAIATLGIAEIIIAVLKN 209

Query: 140 WKPITNGKAGIYVADRLYF------------LGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              +  G   +Y   R                       +      +S +  ++    + 
Sbjct: 210 EDWLARGVKNVYGIPRPAPVVGYEVELQQDPGFVARAEWLGLDPVTASTLSVKLGYSLLF 269

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  +   +     R+      R IRDN+ A  ++   +    L  F + SA  G+AGA
Sbjct: 270 AIVLLMLLWMAQMALRSPWGRMMRAIRDNEVAAEAMGKDVTRRHLQIFVLGSAICGIAGA 329

Query: 248 FFAASRDRISPDMFKFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                  +++P  ++      +V  +VI+GG  +         ++  +      +  +  
Sbjct: 330 MMTTLDGQLTPSAYQPLRFTFLVWVMVIVGGSGNNFGAVLGAFLIWFLWVQVEPIGLWLM 389

Query: 307 NSLLKFDCSFNMR-----------HTTLMVIALFLVILMRSHSLLRLR 343
           N +       +                 M + L +V+      L+  +
Sbjct: 390 NLITAGMPDGSALREHLIDSAAHMRLFTMGLILLIVLRFSPRGLIPEK 437



 Score = 40.2 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 33/86 (38%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L       L L  G T+S      +    LI  + A G+++  G  GL ++  +   A+G
Sbjct: 9   LLFAVVGALILLTGFTQSWNAAILILNMGLISAVMAIGVNLQWGFAGLFNVGVMGFVALG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMIS 103
             + V+  +      W       +++
Sbjct: 69  GLAVVLFSTPTTPGAWSAGGFGIILA 94


>gi|21225462|ref|NP_631241.1| branched amino acid transport system permease [Streptomyces
           coelicolor A3(2)]
 gi|9716222|emb|CAC01583.1| putative branched amino acid transport system permease
           [Streptomyces coelicolor A3(2)]
          Length = 290

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 84/291 (28%), Gaps = 14/291 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +  S       Y +   G+++V    G+++        +G     +     G  +W   
Sbjct: 6   DFTLSGLGAGTTYALVGLGVALVYQVTGVINFAQGDFVMLGGLGCAV-LHEAGTPLWAAA 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +   + A G ++ L  ++   D      +I++      L     +  G          
Sbjct: 65  LTAIAATAAVGALLDLVVVRRARDADGERLIILTIGASVTLEGAALLVFGPDSH------ 118

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 V S      F            +  +        + L+L RT    A R     
Sbjct: 119 -----FVPSFSEGRAFEVFGAHVVRQYVWCGVATGVAVLLMWLFLTRTLWGTAMRATAME 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   +  +     L AF +++A   +AG F A  +             +   +  ++G
Sbjct: 174 PEAVRLVGVSPARMSLLAFTLAAALGALAGVFLAPLQP--PDASVGIPFGLKGFTAAVIG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           G+ S +       ++  V     G     +   L +     +       + 
Sbjct: 232 GLVSPAGAVAGGLLVGLVEAFATGYLSSEYKDTLTYGLLLAVLLLRPTGLL 282


>gi|288931544|ref|YP_003435604.1| inner-membrane translocator [Ferroglobus placidus DSM 10642]
 gi|288893792|gb|ADC65329.1| inner-membrane translocator [Ferroglobus placidus DSM 10642]
          Length = 300

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 57/307 (18%), Positives = 113/307 (36%), Gaps = 35/307 (11%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
              YI  + I + I+ + A  L ++VG  G L+      +  GAY        +      
Sbjct: 23  GDGYIMRVLILVHIFAILAASLDLIVGYTGQLTAGHTAIWGWGAYFAAWSILYFNAPPAA 82

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
            + VSA++    G  +G+  L+F+   L + T  +  +   I  ++  IT G+ GI+   
Sbjct: 83  SLFVSAVVGALLGFGIGVLCLRFKYLLLTLVTFAILILSYAIARQFTSITGGELGIHGIP 142

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
           +L                        + ++YV       +  I+L + ++ I    R I+
Sbjct: 143 KLSD--------------------NTLVIFYVSFAALIATILILLAITKSEIGLRMRAIK 182

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           D+++    L   ++  K+ A  + S F G AG  +      +    F     + +I +  
Sbjct: 183 DSEEGAKVLGVDVVKYKVLANVIGSTFAGFAGGLYTTYMGSVGSTNFYVDHLLRLILMWG 242

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +GG  S+   A    I++ + E    +  Y                  L   AL +++ +
Sbjct: 243 IGGGGSIIGPAIGAYIVMLLSEYLRVIEEY---------------RLILFGAALIVILRV 287

Query: 335 RSHSLLR 341
               +  
Sbjct: 288 FPSGVYG 294


>gi|116254576|ref|YP_770412.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259224|emb|CAK10353.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 310

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 94/291 (32%), Gaps = 19/291 (6%)

Query: 51  MFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIM 110
           + A GL+++ G + +L++     YAIGAY   +  +  G      +P +  I       +
Sbjct: 32  IIAVGLTLIYGVMKILNMAHGTFYAIGAY---MSVTLLGWWFAQGLPPAGSIPVMIVAAL 88

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
              ++        +           +L+    +      +               +  F 
Sbjct: 89  IAGTIVGLVVERGVLRFFTGRDPIVLLLVTYALFLILEDVVKLIWGVDPWIASDPVWTFG 148

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                 ++Y  +   +++        +  +L+ TA     R +  + +   ++   +   
Sbjct: 149 NVYLGPLVYPTYNLIIVVVAIVSGGFLTWFLQFTAKGKMLRAVIHDPEVSQAMGINVSRW 208

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           K+SAF   S    + GAF A +              +++ + V++GG+ S+        I
Sbjct: 209 KVSAFVAGSILAALGGAFTAPTISVA--PGMGVEVVVMMFAAVVIGGLGSIPGTIVGALI 266

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +  V  L                  +       +   + +V+ MR   L  
Sbjct: 267 VGFVRSLAVHY--------------WPEVEVFSIYAVMAIVLAMRPQGLFS 303


>gi|313678151|ref|YP_004055891.1| carbohydrate uptake ABC transporter-2 (CUT2) family, permease
           [Mycoplasma bovis PG45]
 gi|312950190|gb|ADR24785.1| carbohydrate uptake ABC transporter-2 (CUT2) family, permease
           protein [Mycoplasma bovis PG45]
          Length = 662

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/348 (14%), Positives = 108/348 (31%), Gaps = 30/348 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGAT---------KSQKYIDSMGIQILIYVMFAWGLSIVV- 60
           +  +  +      LLLF                + K         +IY + + G+     
Sbjct: 44  WSVVFGIFVSSVVLLLFFQTNPFEFFTQVVKATTNKGNIDWVYIFIIYSLASIGVGFSFK 103

Query: 61  ------GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
                 G  G +SL+ VI +A+   S VI  +    S  L+  +  +      +   +  
Sbjct: 104 TGLFNIGVAGQMSLSGVICFALINKSNVIDATGVIKSQGLVFAIMLLSIVIGFLYAAIAG 163

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
                  L  A   + E+   IL+ W  +  G                  S         
Sbjct: 164 -------LCKAFFNIHEVVSTILLNWVAVYIGSFIFGSKSPFNNDFVFANSPTGSATITI 216

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLR--RTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
           +  +++   +++L  +     ++ L++    T++    +    N+ A            +
Sbjct: 217 TGGLFDKDSFWILGIVLVAFVALTLYMIFAFTSLGYKIKMNGLNKDASSYAGVNQKLTTV 276

Query: 233 SAFAVSSAFIGMAGAF---FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            +   S A  G+AG     + A +  +             I+I ++ G+ S   I  ++ 
Sbjct: 277 LSLGFSGALAGLAGFIHFVYKAKQYDVVALSSPLPLGFDTIAISLI-GINSPIGILFSSV 335

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL-MRS 336
               +      +  YY  S +K      +    +   AL ++    + 
Sbjct: 336 FYTMLEFSRIELIGYYSTSGVKEGGIDLVVGVIIFTSALAVMFTNFKP 383


>gi|282898161|ref|ZP_06306152.1| inner-membrane translocator [Raphidiopsis brookii D9]
 gi|281196692|gb|EFA71597.1| inner-membrane translocator [Raphidiopsis brookii D9]
          Length = 288

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 83/288 (28%), Gaps = 13/288 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      I  + A GL++  G L L +        +GAY   ++          ++  
Sbjct: 9   IVNGIAVGSIIALAAVGLTLTYGILRLSNFAHGDFLTLGAYFTWVINGWGINIWLSMVVA 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +   A  +   +   + R       TLI+  I   + ++                L+ 
Sbjct: 69  AILTVIAMLLTEKMLWSRMRALRATSTTLIIISIGLALFVR-----------NGIIFLWG 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L          +        VL         +   L+ T I  A R + D+  
Sbjct: 118 GKNQNYNLPVIQALDIGGLKVPQNQLLVLGLAILAILFLRYILQNTKIGKAMRAVADDLD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   +       + ++ +F  + G+ +             +   + + + VILGG+
Sbjct: 178 LARVSGINVERVIFWTWIIAGSFTSLGGSMYG--LITAVRPNMGWFLILPLFASVILGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            +      A  I+    E+        +   +       +       +
Sbjct: 236 GNPYGAIFAAFIIGIAQEVSTPWLGSQYKQGVALLIMILVLLIRPKGL 283


>gi|171316599|ref|ZP_02905814.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MEX-5]
 gi|171098237|gb|EDT43045.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MEX-5]
          Length = 349

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 91/285 (31%), Gaps = 11/285 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V  +   L   A  S   + ++ +Q+          + V+   G + L+     A+  
Sbjct: 39  LIVLIVAFSLTSAAFFSVGNLMTVALQVTSIAYLGVAATCVI-ITGGIDLSVGSVLALAG 97

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               +L          ++    + +    +     +    G    IATL M  + + + +
Sbjct: 98  VGAALLVKAGIPVPVAMLGGMLVGAACGWVNGICVTHM--GLPPFIATLGMMLVARGLAL 155

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +                L        S I    FP +       + Y ++ M  L  ++ 
Sbjct: 156 QITGARPVSGLGDAFGELGNGALFKISHIGADGFPDT---IFPGIPYPVVIMVVLFVAVS 212

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L RT++      +  N +A       +   KL  + +S    G  G    +      P
Sbjct: 213 VLLSRTSLGRHIYAVGSNAEAARLSGVNVQGVKLFTYVLSGLLAGATGCVLMSRLVTAQP 272

Query: 259 DMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +     E   + S VI     +GG+ ++S  A    ++  +    
Sbjct: 273 NEGVMYELDAIASAVIGGTSLMGGVGTISGTAIGAFVIGVLRNGL 317


>gi|326775494|ref|ZP_08234759.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|326655827|gb|EGE40673.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 296

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 76/307 (24%), Gaps = 21/307 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G  ++  +  +++         G Y   +      +  W  + V
Sbjct: 8   LLGGLSIGSVYALIALGFVVIFKATEVVNFAHASLLLAGGYVTAV--LHDDIGFWPALLV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +   G  +    ++           I++     +LI       G            
Sbjct: 66  GIAGAATVGAAIEFFVMRRYRGSDHSVLAIVTIGVDILLITELTRRMGTD---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +             +          L    L    +L  R T+   + R   +N +
Sbjct: 116 -VLALGDPWGNEVVSVGGITLAQTRIAAFLAAGLLITVFLLAFRYTSWGVSMRAAAENPQ 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L+A    +  +    A F         +       +      ILGG+
Sbjct: 175 TAALMGIRLGRVSLAA-WAVAGALAAVAALFLTVFPTPGLERATSLAALKAFPAAILGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +       I+        G                         + +  V+L+R   
Sbjct: 234 DSTTGALAGGLIVGVTESFATGYQSDLAFLGRGIGDLAP-------YLVMVAVLLIRPAG 286

Query: 339 LLRLRTP 345
           L   + P
Sbjct: 287 LFGTKEP 293


>gi|222082701|ref|YP_002542066.1| ribose ABC transporter [Agrobacterium radiobacter K84]
 gi|221727380|gb|ACM30469.1| ribose ABC transporter [Agrobacterium radiobacter K84]
          Length = 337

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/325 (11%), Positives = 105/325 (32%), Gaps = 19/325 (5%)

Query: 7   RLNKYDKILCLLAVVYPLLLF-LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +L +  ++   L ++  ++          +   +  +     +  + A GL  VV   G 
Sbjct: 9   KLQRRPEVWLALVIILAIIALSATAPGFLTLANVVDLLETYSVQSIMAMGL-FVVLVSGG 67

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + ++     ++  Y   +L ++ GL  ++ I +   +    G I  L     R   +   
Sbjct: 68  IDISFAATASVAQYVTALLATQSGLPPFICIGLGLSVGILLGCINALLIHFIRITSIIAT 127

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
             +MS  F  ++   +  +      +  +R+ F                +       +  
Sbjct: 128 IAMMSVSFSLLMYFSQGKSIYTLPDWWTERIVFWEHE------------APNGDLTRITL 175

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            ++ M   +     ++ RT       T+  N +A   +   I   +  A+        + 
Sbjct: 176 PIVVMLAATLFTWFFMTRTKTGRQLYTMGGNPEAARRIGVNIAKLQFIAYGFLGFMAAVG 235

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G   A       P+    +E  ++ + V+      GG+ ++  +     +L  +      
Sbjct: 236 GLLQAHRVGESVPNAMYNTELSVLSAAVLGGASLTGGIGTVPGVLLGIVLLAILQNGLNL 295

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMV 325
           +    +   +    +  +  +  ++
Sbjct: 296 LGVSSYFFQIVIGLTILISTSITVI 320


>gi|159046265|ref|YP_001541937.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12]
 gi|157914024|gb|ABV95456.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12]
          Length = 294

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 100/310 (32%), Gaps = 26/310 (8%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
                 + +     +  ++ A GL+I+ G L +++++    YA+GAY  + L +      
Sbjct: 7   FVLAPQMLNGLALGVSVILVALGLTIIFGLLDVINMSHGEFYAVGAYGALALAAFGVNYW 66

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            L+  V  M+     +       +         + ++      ++ +             
Sbjct: 67  VLMAMVPLMMIPLGIVTERYLIRRVYDGADRHVSTLLLTFGLGLIAEDVLKIIFGPNTQR 126

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
            +      T +             +    +  +++     +  ++   + RT +    R 
Sbjct: 127 PENPLPGATDLMG-----------IFIPTYRLFLIAISAAVILAVAFVVYRTRLGAIVRA 175

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
              ++    SL   + +    AFA   A  G+AG   A            F    I  ++
Sbjct: 176 ASFDRNMAASLGVRVGWVYSGAFAFGVALAGLAGVLLAPIYSVFPTMGRDFIL--IAFTV 233

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           VI+GGM S+     A  +L  +  +   +    ++  + F               + LV+
Sbjct: 234 VIVGGMGSIWGAVVAGIVLTQIQAISSLVISPVWSEPIVFG-------------VMVLVL 280

Query: 333 LMRSHSLLRL 342
           + R   L   
Sbjct: 281 MFRPQGLFGR 290


>gi|13474150|ref|NP_105718.1| sugar (D-ribose) ABC transporter, permease protein [Mesorhizobium
           loti MAFF303099]
 gi|14024902|dbj|BAB51504.1| sugar (D-ribose) ABC transporter, permease protein [Mesorhizobium
           loti MAFF303099]
          Length = 348

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/343 (13%), Positives = 105/343 (30%), Gaps = 34/343 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           ++K D  L +L +V   ++ +          + +    I ++ + + G + V+   G + 
Sbjct: 18  MSKKDLGLLILILVVGAIVAIINPRFLLPINLANTSNLIGLFGILSIGQAFVI-ITGGIE 76

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+    ++   +   L   L   +   +    G++ G    + +     +   
Sbjct: 77  LSVGSVVALLGTLFIDFIAVRELDWPLAFVLIIALGAIIGLVHGWLITRLKLQPFVVTLC 136

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +        +      +G AG         L                 +I    + +V+
Sbjct: 137 GL---LIYRGVARFYTADGTAGFAFGQNFPELEFLTAGRSYGVPNSFIALIVIAIVMWVV 193

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L              R+        I  N++A            ++A+ +      ++  
Sbjct: 194 L-------------HRSVFGRYLYAIGKNEEAAKYSGIRTGRIVMAAYVICGVLTALSAI 240

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGM 301
           +FA     ISP        +  I+  +LGG        SL  +   T +L  +  L   +
Sbjct: 241 YFAMYTRSISPASHGQFYELYAIAAAVLGGFSLRGGEGSLIGVILGTVLLQELQNLVNLL 300

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                          ++    +  + L  V++ +   + R R 
Sbjct: 301 -----------GIPSSLNFAVMGGVILIGVLVDQQWGVFRARR 332


>gi|332701782|ref|ZP_08421870.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332551931|gb|EGJ48975.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 307

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 100/313 (31%), Gaps = 17/313 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           + + +       Y + A G  +V G L L++      + +GA+  + + + +  ++    
Sbjct: 7   QNVLNALQWGSYYSLIALGYCLVYGVLLLINFAHGDIFMVGAFIGLGVATFFLGNLGPEF 66

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLA---IATLIMSEIFQNILIKWKPITNGKAGIYVA 153
            +S  +  A  + + +      G  L       L      +  ++    +          
Sbjct: 67  GLSGPVVLALTIPLTMILTAAVGVTLERIAYRPLRRKGAHRLYVVITALMCGLVLENGNL 126

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             L     +   LI    +             V+L    +   +   + +T +  A R I
Sbjct: 127 AILGASRRSFPQLIPTQVYDFGLFSVTNVKIAVILAAILVFIFLQFVVTKTKMGMAMRAI 186

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             ++ A   +   +    +  F + S F G+AG  FA S   + P M         I+ V
Sbjct: 187 SWDKFAIPLMGIPVDSIIVFTFILGSGFAGLAGVLFAMSYPVLEPYMGAMVGWKAFIAAV 246

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           + GG+  +        +L  V  +   +       L+ F               L +++ 
Sbjct: 247 V-GGIGDIRGAFAGGFLLGFVEIMVVAVFPSTMRDLISFT-------------ILLVILT 292

Query: 334 MRSHSLLRLRTPS 346
            +   L  +   +
Sbjct: 293 WKPTGLFGMAKTT 305


>gi|312126912|ref|YP_003991786.1| inner-membrane translocator [Caldicellulosiruptor hydrothermalis
           108]
 gi|311776931|gb|ADQ06417.1| inner-membrane translocator [Caldicellulosiruptor hydrothermalis
           108]
          Length = 328

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 94/302 (31%), Gaps = 18/302 (5%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                 + + I S+ +   +  M A G++ V+ + G + L+      + A    +  + +
Sbjct: 34  ASPNFCTFENIISIILATCVNGMLALGVTFVIITSG-IDLSIGTVMTLSAVMSGVFITYW 92

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            L +WL +         CG + G+   K +                   +    I  G A
Sbjct: 93  HLPVWLGVLGGIGTGMLCGFVNGIVISKMKLPPFIAT------------LGMMMIAKGLA 140

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
            +       +                  +I    +   +L     +    + L +TAI  
Sbjct: 141 LVISGATPIYYTDAPSFSDIAMGSIIGKIIPGADIPNAILIFILFAIIANIILTKTAIGR 200

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N++A       +   K+  + +   F+G+ G   A+  +   P + +  E   
Sbjct: 201 YDFAIGSNEEAARLSGLNVDRWKIIIYMLCGFFVGIGGILMASRLNSAQPALGQGYELDA 260

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           + ++VI      GG  S+        I+  +      ++      ++             
Sbjct: 261 IAAVVIGGTSLSGGEGSIIGTVIGALIMSTLTNGLRILSVPQEWQIVISGIIVIGAVYLD 320

Query: 324 MV 325
           ++
Sbjct: 321 II 322


>gi|319761089|ref|YP_004125026.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|330822947|ref|YP_004386250.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317115650|gb|ADU98138.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|329308319|gb|AEB82734.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 289

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/311 (15%), Positives = 104/311 (33%), Gaps = 28/311 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                 + + +  I  L+Y++ A G ++V G + +++      Y +GA+   +  +R  L
Sbjct: 3   FTFLIGQALTNGLIIGLLYLLMAIGFTLVFGVMRVVNFAHGEFYMLGAFLAYVCVTRLQL 62

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                +  +  ++   G I+ +  LK       +  +I +     +L     +  G    
Sbjct: 63  PFLAAVLATFAVTLVAGWIIEVLVLKGFRGN-ELNGMISTIGLAMVLQNGALLVFGPDPQ 121

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +              +         ++  +   YV+     +   + L+L R+    A 
Sbjct: 122 SMPP------------VAQGVVSLGPIVLPMSRLYVVAFSIAVLVLLYLFLMRSKGGRAL 169

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +  + +   +            F +  A   +AGA  A             +  +   
Sbjct: 170 RAVVQDTEIASAQGIRSHLMYPLGFGIGVALAAVAGALMAPVFSV--SPSIGSTPLLKAF 227

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            +VILGG+ S+   A A+ +L  V            + +L F               + L
Sbjct: 228 IVVILGGLGSIPGAALASLLLGVVESAANTFMSSSMSDMLLFGF-------------VIL 274

Query: 331 VILMRSHSLLR 341
           +++ R   LL 
Sbjct: 275 MLIFRPSGLLG 285


>gi|90415640|ref|ZP_01223574.1| ABC transporter permease protein [marine gamma proteobacterium
           HTCC2207]
 gi|90332963|gb|EAS48133.1| ABC transporter permease protein [marine gamma proteobacterium
           HTCC2207]
          Length = 308

 Score = 64.9 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 93/301 (30%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   + V+ A GL+I+ G +G++++       +GAY   +    +   +  L  +   +
Sbjct: 22  LILFSVLVLMALGLAIIFGQMGVINMAHGEFMILGAYVTYLTSLFFETYLPGLSSIYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     I       F    L     +       +L  W      +            G +
Sbjct: 82  AIVLAFIAAASLGAFVEWAL--IRRLYKRPLDTLLATWGLSLILQQTYRSVFGAREKGVS 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +      +  V   I    V++    ++ S+   ++R+      R +  N+    +
Sbjct: 140 LPDWMMGSIPVTDMVEIPINGIIVMVLTLLITLSVYFIMQRSQWGAKVRAVVQNRPMAAA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           FA+     G+AG+ F       +         +    +V+ GG  +L 
Sbjct: 200 VGINTSIVDRMTFALGCGIAGIAGSAFTMIGS--TGPTSGQLYIVDTFMVVVFGGAANLM 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     +           +L                 + +++++R   L  L
Sbjct: 258 GTIASAFTISQAQTILEFFMSGSIAKVLTLG-------------MIVVILMLRPQGLFTL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|153010667|ref|YP_001371881.1| monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC
           49188]
 gi|151562555|gb|ABS16052.1| Monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC
           49188]
          Length = 345

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 96/309 (31%), Gaps = 10/309 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++   +  +   A  +     ++ +Q+        G + V+   G + L+     A+  
Sbjct: 35  LIILAAIFSVTSSAFMTVNNAMTIALQVTSIAFLGIGATYVI-ITGGIDLSVGSVLALAG 93

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               +      L I L + +  +    CG+I G+   K +      ATL M  I + + +
Sbjct: 94  VVAALAVKDLSLPIPLAMLLGILTGSLCGLINGVVITKLKLPPFI-ATLGMMLIARGVAL 152

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +                L          I    FP   V+    + Y ++ M  ++    
Sbjct: 153 QITGARAVSGLGESFGVLGNGSLFRIESIDEQGFP---VVTFPGIPYPVVLMIVIAVVAA 209

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           L L RT +      I  N +A       +       + VS    G+ G    +      P
Sbjct: 210 LVLNRTVLGRHIYAIGSNAEAARLSGVNVARVTAFTYVVSGTLAGLTGCVLMSRLVTAQP 269

Query: 259 DMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           +     E   + S VI     +GG+ ++S     + ++  +           F   +   
Sbjct: 270 NEGVAYELDAIASAVIGGTSLIGGVGTISGTFIGSFVIGILRNGLNMNGISAFTQQIIIG 329

Query: 314 CSFNMRHTT 322
               +    
Sbjct: 330 LVILVTVWI 338


>gi|72384076|ref|YP_293430.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72123419|gb|AAZ65573.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 294

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 106/312 (33%), Gaps = 26/312 (8%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +        +    +    Y + + GL+++ G L +++      + +GA    +      
Sbjct: 6   IPLPALLSQLLLGLVNGAFYAILSLGLAVIFGLLNVINFAHGALFMLGAVLAWMGLEYLE 65

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L+ W ++ +S +     G+++    L++      +  L+++     ++        G +G
Sbjct: 66  LNYWTMLLLSPLAVALIGILIEKMMLRWIYKLDHLYGLLLTLGITLVVEGLLRSAYGVSG 125

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +         GTT             F++   +  +V++    +  +    + +T +   
Sbjct: 126 LPYPTPEVLSGTT----------DVGFMMLPNYRAWVVVASLGICFATWYLIEKTRLGAY 175

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R   +N     S    +       +    A    AG   A         +   +  I+V
Sbjct: 176 LRAGTENATMVESFGINVPLMITLTYGFGVALAAFAGVLAAPVIQI--SPLMGQNLIIVV 233

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            ++V++GGM S+         L  +  L   +              +    +T++   + 
Sbjct: 234 FAVVVIGGMGSILGAVATGLALGVIEGLAKVV--------------YPEASSTVVFAIMV 279

Query: 330 LVILMRSHSLLR 341
           +V+L+R   L  
Sbjct: 280 IVLLVRPAGLFG 291


>gi|323526418|ref|YP_004228571.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
 gi|323383420|gb|ADX55511.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
          Length = 343

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/285 (15%), Positives = 92/285 (32%), Gaps = 11/285 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            VV      L   A  S   + ++ +Q+          + V+   G + L+     A+  
Sbjct: 33  LVVLIAAFSLTSAAFFSVGNLMTVALQVTSIAYLGVAATCVI-ITGGIDLSVGSVLALSG 91

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
            +  +L          ++    + +    +      +   G    IATL M  + + + +
Sbjct: 92  VAAALLTKAGVPVPLAMLGGMLVGAACGWV--NGICVTRMGLPPFIATLGMMLVARGLAL 149

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +                L        S I    FP +       + Y ++ M  L A++ 
Sbjct: 150 QITGARPVSGLGDAFGELGNGALFRISHIGPDGFPDT---VFPGIPYPVVIMVVLFAAVS 206

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L RT++      +  N +A       +   KL  + +S    G  G    +      P
Sbjct: 207 VLLSRTSLGRHIYAVGSNAEAARLSGVNVPGVKLFTYVLSGLLAGATGCVLMSRLVTAQP 266

Query: 259 DMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +     E   + S VI     +GG+ ++S  A    ++  +    
Sbjct: 267 NEGVMYELDAIASAVIGGTSLMGGVGTISGTAIGAFVIGVLRNGL 311


>gi|86136054|ref|ZP_01054633.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85826928|gb|EAQ47124.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 287

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 87/297 (29%), Gaps = 23/297 (7%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
            Y + A GL++  G   +++L       +G  +   L +   +S  L I + A ++    
Sbjct: 13  TYALMAMGLNLQYGVARIMNLANGEMLVLGGLAAFWLFTSAAISPLLTIVIVAPLAFVGN 72

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
            ++    L            +  +              G + + V   +   G       
Sbjct: 73  WLVYRFLLLPLVRRAKNQGQLEVDSILATF--------GMSFVLVGVMVSIHGEYFTYSF 124

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
               F        +      +G C +  ++  WL RT    A R +  + +A   +   +
Sbjct: 125 LADPFTLLGNTVALNRLVAFVGACIIGGALYYWLNRTYSGTAVRAVSVSTEAAGLVGINV 184

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
                 AFA+  A   + G   +                +  + I+I+GG+  +     A
Sbjct: 185 DRVSALAFAIGGAVTAVGGTLISTFITL--DASIGVIFTMKALIILIMGGVGDIRGAIIA 242

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             IL  V  +   +                             V+L R   L   +T
Sbjct: 243 ALILGLVETIVATVIDPGLT-------------LVAAYAIFLCVLLFRPQGLFGRKT 286


>gi|167620338|ref|ZP_02388969.1| branched-chain amino acid ABC transporter, permease/ATP binding
           protein, putative [Burkholderia thailandensis Bt4]
          Length = 412

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/322 (14%), Positives = 106/322 (32%), Gaps = 27/322 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            L+ +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 14  ALSWLALVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 73

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+     +   A G + G  + +  G   A+ TL + E+    
Sbjct: 74  GAFVAAHGFNRYGLPLPLVPLAGGVAGAAFGALFGFVATRRAGTAFAMITLGLGELVAAA 133

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                     +      +  Y ++   C  +A 
Sbjct: 134 AWSVPDWFGGAGGVSI------------DRAAGPALAAWDFGKPMHAYALIAVWCVAAAV 181

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT  +     +RDN     +L T     + +    ++ F G++GA      +  
Sbjct: 182 AMRVLVRTPFARLANAVRDNPARVAALGTDPRRVRYAMAIAAAFFAGVSGALTLIDVEVA 241

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +           
Sbjct: 242 TSESVGMLRSGAVLFATVIGGATAFFGPVVGAVLLTFFSVFVASVSRAW----------- 290

Query: 317 NMRHTTLMVIALFLVILMRSHS 338
                  + +    V+L     
Sbjct: 291 ----LLYLGLLFVAVVLAAPGG 308


>gi|39937103|ref|NP_949379.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009]
 gi|39650961|emb|CAE29484.1| possible ABC transporter, permease protein [Rhodopseudomonas
           palustris CGA009]
          Length = 312

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 101/306 (33%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A    ++  +  +++        IGA+    L ++Y L  W+ +P+
Sbjct: 25  LVNGLVVGTLYGVVAMSFVLIYKATQVVNFAQGELLLIGAWVCWTLLAKYQLPFWVGMPI 84

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+ + +  L+       I+ ++++     +         G            
Sbjct: 85  TLVFMFIFGIAVQIIVLRPMIGEPIISVIMVTIALSTVFQAALKWIFGVNPQP------- 137

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +          +  +      L+    +   +  + R +    A R    NQ+
Sbjct: 138 ----FPQIFTTRSISIGGLQIQTVYVMSLVVSVAMMIGMAWFFRVSKYGLAMRATAFNQQ 193

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  ++      A+A+S+    +AG   A      S         I V    ILGG+
Sbjct: 194 VAQSLGISVKSVFAMAWAISATVSAVAGVVVAVVNGVSSGLSAY---GIKVFPAAILGGL 250

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +  +   ++  Y +            +       L ++++++ + 
Sbjct: 251 DSIGGAVLGGIIIGLLENIAQYVDSEYLHW--------GNLYEIAPFYVLIIILMIKPYG 302

Query: 339 LLRLRT 344
           L   + 
Sbjct: 303 LFGTKD 308


>gi|315650695|ref|ZP_07903751.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Eubacterium saburreum DSM 3986]
 gi|315487072|gb|EFU77398.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Eubacterium saburreum DSM 3986]
          Length = 323

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 103/318 (32%), Gaps = 26/318 (8%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I  L+  ++  +      +  + K + ++  QI   ++ A G+++V+  LG + L+   
Sbjct: 20  IIALLVLAIFLTVFPATSSSFPTTKNVFNVLRQISTNMLLACGMTMVI-ILGGIDLSVGS 78

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
             A+         SRYG++I+L + +  +I    G   G    +           I++  
Sbjct: 79  VIALSGVFAAGCVSRYGMNIYLAMIIGVLIGLIIGAFNGFVISRTTIPPF-----IVTLA 133

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             NI      +  G + + V  + +                     Y       ++ M  
Sbjct: 134 TMNIARGLSGVYTGGSPVRVVSKEWQWI---------------GAGYVGIFPVPVIIMII 178

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L    +L + RT I      +  N  A      ++   K   +  S    G+AG   A+ 
Sbjct: 179 LFIISVLIMNRTKIGRYIYAVGGNTLAAKFSGISVSKVKFMVYTYSGLMAGLAGVILASR 238

Query: 253 RDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
                P     +E   + ++V+      GG   L        I+  +      MN   F 
Sbjct: 239 MYSGQPTAGDGAEMDAIAAVVVGGTSMSGGYGKLGGTLVGALIIGILSNGLNLMNVNSFW 298

Query: 308 SLLKFDCSFNMRHTTLMV 325
             +       +      +
Sbjct: 299 QTVVKGIVILLAVFIDYI 316


>gi|73537615|ref|YP_297982.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72120952|gb|AAZ63138.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 294

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 111/315 (35%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  +
Sbjct: 3   LFGVPLPALLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAVLAWMGMN 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL+ WL++ ++ + +GA G+++    L+    +  +  L+++     +L        G
Sbjct: 63  YLGLNYWLMLLLAPLATGAIGVVLERTMLRHLYRFDHLYGLLLTLGICLLLEGLLRSAYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+         G T             F++   +  +V+L    +  +    + +T +
Sbjct: 123 VSGLPYPTPEALTGAT----------SLGFMVLPNYRAWVVLASLAVCFATWYMIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
            +  R   +N +   +    +       +A       +AG   A         +   +  
Sbjct: 173 GSYLRAGTENPRIVEAFGINVPLLVTLTYAFGVGLAALAGVLAAPVMQV--SPLMGQNLI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+         L     L                  +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSIFTGLGLGVFEGLTKVF--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
           A+  V+L+R   L  
Sbjct: 277 AMVCVLLVRPAGLFG 291


>gi|84515490|ref|ZP_01002852.1| ABC sugar transporter, inner membrane subunit [Loktanella
           vestfoldensis SKA53]
 gi|84510773|gb|EAQ07228.1| ABC sugar transporter, inner membrane subunit [Loktanella
           vestfoldensis SKA53]
          Length = 362

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 89/320 (27%), Gaps = 11/320 (3%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L      L +LA+       L      S   +  +  Q+ I  + A   S+V+ + G + 
Sbjct: 40  LQPALVPLFVLAMSILTFGLLLGTKFFSPFALTLILQQVQIVGIVAAAQSLVILTAG-ID 98

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+      + +        RYGL + + +        A G + G      +     +   
Sbjct: 99  LSVGAIAVLSSVIMGQFTFRYGLPVEVAVLCGLAFGTAIGTLNGWLVAVMKLPPFIVTLG 158

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           +   +     +  +  T     I     L            F    +          Y +
Sbjct: 159 MWQIVLAANFLYSRNETIRAQDIESQASLLQFL-----GTTFKVGANDAGQGGATFTYGV 213

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + M  +   +   LR TA       + D+  A       +    +S +A++     +AG 
Sbjct: 214 IAMVLIFVILAYMLRHTAWGRHIYAVGDDPDAAQLSGVNVRATIISVYALTGFVCAIAGW 273

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
                   +SP   +      + ++VI      GG  S+        I+           
Sbjct: 274 ALIGRIGSVSPTSGQLLNIESITAVVIGGISLFGGRGSILGTFFGALIVGVFTLGLRLAG 333

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
                + L            
Sbjct: 334 ADAQWTFLLIGVLIIAAVAV 353


>gi|296534512|ref|ZP_06896933.1| ABC superfamily ATP binding cassette transporter inner-membrane
           protein [Roseomonas cervicalis ATCC 49957]
 gi|296265163|gb|EFH11367.1| ABC superfamily ATP binding cassette transporter inner-membrane
           protein [Roseomonas cervicalis ATCC 49957]
          Length = 310

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 95/305 (31%), Gaps = 21/305 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---ILGSRYGLSIWLLI 96
                      M A GL++V G L +L++     YAIG Y+     +  +  G   W+ +
Sbjct: 17  LDGLSYAAAVFMVAVGLNLVFGVLRVLNVAHGSLYAIGGYAAASLGLFLAASGAPAWVSL 76

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P   + +   G I+G P  +          ++   +   + +  + +     G+     +
Sbjct: 77  PALLVAALLVGAILGPPIERLLRRTQDHEPVLQLLVTFALFMILEDLQKLLWGVQ--PVV 134

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +   +               +Y +        A +  +LRRT        +  +
Sbjct: 135 SDTPVKLLGTVDIPFGADVIPFNAYQLYVLPGIALLTLAGLAWFLRRTLSGRMIVAVTAD 194

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++A  +L        L  F   +A   + GA  + +   +          ++  ++V   
Sbjct: 195 REAARALGIDAAKVTLLTFTAGAALAALGGALASPTVSLV--PGVGAQTIVLSFAVVATA 252

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+  +   A A  ++     +                         +  + +  V+L+R 
Sbjct: 253 GLGQIEGAAIAAILIGLGRSIAVYFE--------------PELEVVVPYLIMVAVLLVRP 298

Query: 337 HSLLR 341
             L  
Sbjct: 299 QGLFG 303


>gi|290955122|ref|YP_003486304.1| sugar ABC transporter transmembrane protein [Streptomyces scabiei
           87.22]
 gi|260644648|emb|CBG67733.1| putative sugar transport integral membrane protein [Streptomyces
           scabiei 87.22]
          Length = 337

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 87/312 (27%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      L      +      +  Q+++    A G ++++ + G + L+C    A
Sbjct: 35  LVALILACAFFSLSSDQFLTGGNFSLIVQQVMVVGTLAIGQTLIILTAG-IDLSCGAVMA 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            G+     + +   L     I +  ++ G  G++ GL   K       +   +++  F  
Sbjct: 94  FGSIMIAKMAAEGSLPPLAAIALGLVVCGGFGLLNGLLVQKIPLPPFIVTLGMLNVAFAL 153

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             I                      T             +F + +  + Y  L    L  
Sbjct: 154 THIY-----------------SEEQTVTNLPGPLTALGQTFPLGKTDITYGSLVTIALFL 196

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L  T        + ++ +A            +  + V+    G+A     +    
Sbjct: 197 LLAYTLSNTGWGRHVYALGNSPEAARLNGIRTGRLTIGVYTVAGILYGIAALLLISRTGV 256

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P   +      + ++V+      GG  S+        I+         M        L
Sbjct: 257 GDPQAGQTDNLDSITAVVLGGTSLFGGRGSVLGTFIGVLIVGVFRNGLQLMGVASIYQTL 316

Query: 311 KFDCSFNMRHTT 322
                  +  T 
Sbjct: 317 ITGVLVILAVTV 328


>gi|304394018|ref|ZP_07375941.1| ABC transporter ATP-binding protein [Ahrensia sp. R2A130]
 gi|303293458|gb|EFL87835.1| ABC transporter ATP-binding protein [Ahrensia sp. R2A130]
          Length = 337

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/352 (13%), Positives = 103/352 (29%), Gaps = 26/352 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQ---------KYIDSMGIQILIYVM 51
           M  F  R   +  I  ++  V   ++F                    + +      +Y +
Sbjct: 1   MRRFIERHPVWSAITFVVVAVLLWMIFAVWPEWLKDAIGRKKIFLNALFNGVTLGGLYFL 60

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A G +++ G +  ++L     Y +G Y    + +  G  +         +     ++  
Sbjct: 61  VASGFTLIFGLMRNVNLAHGSLYLLGGYIGYSVSNATGSWLLAFPVAFITVGAIGILLQF 120

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL-GTTVRSLIRFF 170
               +  G+ L    + +        +           I     L     T   + +   
Sbjct: 121 FVFRRMEGEDLRQTLVTIGISIVMADLMLWYWGGDFYNITPPGWLSGPIETFFVTGLSRS 180

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                F+ Y +    +L     +  ++ L L RT I    R   D++    +    I + 
Sbjct: 181 TGDPIFLKYPVVRLVILAAAIVIGVAMWLLLNRTQIGMLIRAGVDDRDMLSATGARIQWV 240

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
            +  FA  +   G+AG      +     +  +F      + +VI+GGM S+         
Sbjct: 241 FVGVFAFGAGLAGLAGVVGGTFQTVAPGEDIRFLL--ASLVVVIVGGMGSI--------- 289

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                            +       F      L  + + +V+  R   L+  
Sbjct: 290 -----TGAAIGAIIIGCAEQFGSVYFPTYAVVLTFLIMVVVLAFRPQGLMGR 336


>gi|29827732|ref|NP_822366.1| branched-chain amino acid ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
 gi|29604832|dbj|BAC68901.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
          Length = 298

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/292 (15%), Positives = 95/292 (32%), Gaps = 25/292 (8%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL---SIWLLIPVSAMISGACGMIMGLPSL 115
             G + ++++        GAY+  +L         S+ + +PV+ ++SGA G ++    +
Sbjct: 28  TFGQMNVINMAHGEFIMAGAYTTYVLQKSISSAGLSLLVALPVAFLVSGALGALLEWLLI 87

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
           +          L+   +   +    + I         A  L     TV            
Sbjct: 88  RRLYLRPLDTLLVTWGVSLMLQQLARDIFGAPNVQTRAPELLTGNITVIGGD-------D 140

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
            + +     ++L        ++ L LR T +    R +  N+        +      +AF
Sbjct: 141 PLTFANSRLFILGLAIAAVVALSLTLRLTPLGRRIRAVVQNRDLAEVSGISTGRVDRTAF 200

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            + S   G+AG   A +           +  I    ++++GG+  L        +L  + 
Sbjct: 201 FIGSGLAGVAGV--ALTLVGPIGPTMGTNVIIDAFLVIVVGGIGQLKGSVIVAFVLGVLQ 258

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
            +                 +       L+++A+   +  R   L  LRT S 
Sbjct: 259 SVLEY-------------STTVSVAKVLVLVAIVAFLQWRPQGLYTLRTRSL 297


>gi|119715098|ref|YP_922063.1| inner-membrane translocator [Nocardioides sp. JS614]
 gi|119535759|gb|ABL80376.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Nocardioides sp. JS614]
          Length = 341

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 108/260 (41%), Gaps = 14/260 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +    + L         +   +  + L++ +    +  ++  L L S      + IGA
Sbjct: 4   LAMLAGTVALLAAPYYLDLFQIGLVTRGLVWAVVGLSVWFLLRILALPSFGHAAFFGIGA 63

Query: 79  YSYVILGSRYG-LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           Y+  +  +R+   ++++ + ++ +++ A  + + L + +       + TL  +E+ +++ 
Sbjct: 64  YAAGLAVTRWEVDNVFVALAIAVLLTCAVALPIALVASRLGSIGFLLITLAFAEMLRSLA 123

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++W+ +  G  G+    R       +             +   +  +Y  +G+  L   +
Sbjct: 124 LRWRSV-GGSDGLVGVTRPDAGPLPID------------LADPLAFFYFTIGVTALCLLV 170

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  ++R+A+      IR+++    +L   +   K+ AF +S+A   +AG   A     +S
Sbjct: 171 LRLVQRSALGGILVGIRESESRMRALGYRVGAYKVFAFELSAAVAAVAGVLHAYLIRFVS 230

Query: 258 PDMFKFSENIIVISIVILGG 277
           P+      +   + IV++ G
Sbjct: 231 PEDLGALVSARGLIIVVIAG 250


>gi|261315854|ref|ZP_05955051.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10]
 gi|261304880|gb|EEY08377.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10]
          Length = 192

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 14/171 (8%)

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
              S V   +    V++    L       + RT++  A R    ++K    L   +    
Sbjct: 30  LFGSGVTISLKQIVVIVVTAILLTIFWYVVNRTSLGRAQRACEQDRKMAALLGINVDRVI 89

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + +    +AG  + +    IS     F   +   +  +LGG+ SL        ++
Sbjct: 90  SLTFVMGAMLAAVAGTLYLSFYGVISF-ADGFIPGVKAFTAAVLGGIGSLPGAVVGGLLI 148

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             +  L        +  +  F               L +V++     +L  
Sbjct: 149 GLIEALWSAYFSIDYKDVAAFS-------------ILAIVLIFMPSGILGR 186


>gi|319796245|ref|YP_004157885.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315598708|gb|ADU39774.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 291

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 97/305 (31%), Gaps = 25/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S   Q  IY + A G  ++  +   +S        +GA+      S +G+  WL   +
Sbjct: 7   LLSGIAQGCIYGLIALGFVLIYKATETVSFAQGDLMMLGAFGAFAGMSIFGMPFWLAAIL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +   A G+++ L  ++        + ++++     +               +   +  
Sbjct: 67  AVVAMAAFGVLLELAVIRPILGQPQFSIVMLTIGIAYVARGLI---------TMVPGIGT 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+    +   +    ++  +    +++    L A +    R + +  A +    NQ 
Sbjct: 118 ETHTLPVPYKDQIWKLGELVVNLEQLAIIVATAILCALLFAMFRYSKLGIAMQASSQNQL 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A + +   +       + +++A   +AG   A                +      ++GG 
Sbjct: 178 AAYYMGIPVKRLNGLVWGLAAAVAAIAGMLLAPITFV---HANMGFIGLKAFPAAVVGGF 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        ++  V           F                   I + L+++++ + 
Sbjct: 235 GSLPGAIVGGLVIGIVESFAGFYLPDGFKDTAP-------------YIVVLLMLMIKPNG 281

Query: 339 LLRLR 343
           L   +
Sbjct: 282 LFGEK 286


>gi|162451372|ref|YP_001613739.1| sugar transport system permease [Sorangium cellulosum 'So ce 56']
 gi|161161954|emb|CAN93259.1| Sugar transport system permease [Sorangium cellulosum 'So ce 56']
          Length = 365

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/325 (15%), Positives = 103/325 (31%), Gaps = 19/325 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +  VV  L L++       Q    +   QI +  +FA G+  V+   G + L+      +
Sbjct: 3   IALVVMCLGLYISNPDFLGQSNSINTLRQISMLGIFAIGIGFVI-IAGGIDLSIGSVIGL 61

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                  L S     +   + +   ++    +++GL              LI     Q  
Sbjct: 62  TGVLIAKLSSSQLGGLGYPLWIGIPVALGVALLIGL----------GQGLLITRLKLQPF 111

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           ++    +   +           L      L+            +  + Y LL    +S  
Sbjct: 112 IVTLGGMLFLRGVSQTIAGGGTLSLGGSPLLALANGGLLKSGSDALIPYPLLMFLAVSGV 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               L  T        I  N+ A       +   + S + +S+   G+AG  +A+   ++
Sbjct: 172 AAYALHFTVFGRYVYAIGGNRDAAEYSGINVKRVETSTYVISAGLGGVAGVCYASYIGQM 231

Query: 257 SPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS--- 308
           S  +    E   + + V+      GG  ++  I   +A++  +          Y ++   
Sbjct: 232 SQQVGIAYEMYAIAAAVLGGCSLRGGEGTVLGIIIGSAVMRVIDNGINMFQLPYEDADRI 291

Query: 309 LLKFDCSFNMRHTTLMVIALFLVIL 333
              +    N     +  + L  VIL
Sbjct: 292 QRIWRLDPNWTFIIIGAVILVAVIL 316


>gi|90422533|ref|YP_530903.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90104547|gb|ABD86584.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 286

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 94/304 (30%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     L+  + A GL++V G LG+++L+    Y +GAY  + L   +G     L   
Sbjct: 8   FLNGLQTGLVIFLAASGLTLVFGILGVINLSHGSFYMLGAYMALSLTGVFGDVFLALAAG 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +      +I  L                  +  Q +L+ +  I        V    Y 
Sbjct: 68  IPLAFALGLLIEWLFIRHLYDR----------DHLQQVLLTFALILVFNELQQVIWGSYP 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S +      +  + Y ++   ++     L+  +   +R+T +    R    N++
Sbjct: 118 HAIPAPSYLSASVRLTEGLSYPVYRLALMAICVALAIMMAFVIRKTRVGRLIRAAESNRE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L           FA   A    AG   A                I+   +V++GG+
Sbjct: 178 MVEALGFDSRLIFRMVFATGVALAATAGMLAAPIESA--YPGIGDRVLIVSFVVVVIGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+      + ++                             + ++   + LV++ R   
Sbjct: 236 GSVRGALIGSLLIGLADAFGKVF--------------LPQFSSIVIYALMALVLVARPAG 281

Query: 339 LLRL 342
           L   
Sbjct: 282 LFGR 285


>gi|284044952|ref|YP_003395292.1| urea ABC transporter permease UrtB [Conexibacter woesei DSM 14684]
 gi|283949173|gb|ADB51917.1| urea ABC transporter, permease protein UrtB [Conexibacter woesei
           DSM 14684]
          Length = 296

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 87/310 (28%), Gaps = 31/310 (10%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL-----SIWLLIP 97
                + ++ A GL+   G + ++++        GAY+  +L +         +  L +P
Sbjct: 12  LSVASVLLLVALGLTFTFGQMNVINMAHGEFVMAGAYTAYVLQTSVFTGAVTLAFGLALP 71

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           ++ ++ G  G+I+    ++          L+   +   +    + I         A    
Sbjct: 72  LAFLVGGVLGLILEFTLIRRLHGRPLDTLLVTWGVSLMLQQLARDIFGAPNVQVKAPSFL 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                            + V       +++  +     +I  +L +       R +  N+
Sbjct: 132 EG-----------GVTVAGVSMPYTRLFIIGLVLVALVAIWFYLSKLPAGRRMRAVVQNR 180

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +            F + S   G+AG   A +           S  I    +VI+GG
Sbjct: 181 DLASASGVRTPRVDRLTFFIGSGLAGVAGV--AVTLLGSIGPTLGTSYIIDAFLVVIVGG 238

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           +  L     A   L                    F               + + +  R  
Sbjct: 239 LGQLRGAIAAAVALGVANAYLEYWTDASLAKAAVF-------------ALIVVFLQFRPQ 285

Query: 338 SLLRLRTPSN 347
            L+  R    
Sbjct: 286 GLVVTRRRGL 295


>gi|116248772|ref|YP_764613.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253422|emb|CAK11810.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 287

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 90/304 (29%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I    +   +Y +FA GLS+V G + L++L       + A+  +IL +  GL  ++   +
Sbjct: 7   ILQGVLLGGLYALFAAGLSLVFGIMRLVNLAHGDLIVLAAFLILILVTTLGLDPFVAALI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +  A G  +    L        +  L+++     ++                     
Sbjct: 67  AMPLMFAIGWGLQYFLLNRTLGKDILPPLLVTFGLSIVIQNGLLEGFSAD---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +         V   I           +   +   + RT++  A+R   D+  
Sbjct: 117 SRRVFAGSLESASVNLGPVTAGIMPLMTFFSAVAVIVCLNQLIYRTSVGRAFRATSDDPV 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +          A  ++   + +A  +     +         +  I     VI+GG+
Sbjct: 177 TAGLMGIRPQRIFAMATGLAMVVVTIAALYLGTRANF--DPTSGPARLIYAFEAVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL     +   +N  +                    +A   V+L +   
Sbjct: 235 GSLWGTLAGGIILGVAQTVGAAINPEW--------------QILAGHLAFLAVLLFKPRG 280

Query: 339 LLRL 342
           L   
Sbjct: 281 LFPR 284


>gi|221640788|ref|YP_002527050.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131]
 gi|221161569|gb|ACM02549.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131]
          Length = 292

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 92/304 (30%), Gaps = 30/304 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   +  + A GLS+V G L ++++     + +GA +   +         L   V+ + 
Sbjct: 15  LVGAAVLALTASGLSLVFGVLRVVNVAHGEFFMLGAVAAWFVSQWVPGPPALAFAVALVA 74

Query: 103 SGACGMIMGLPSLKF---RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                  +   + +    R  Y   AT+I +     IL +      G     V       
Sbjct: 75  CPLLVAGLAALADRLVLKRLAYEPEATIIATIGLLYILQQAALTLYGPEARPVPPPFE-- 132

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                      R    +  +  +  +V+     + A + L L R+ I    R  + +++ 
Sbjct: 133 ----------ARLQLPWFGWSGYKLFVIGAAGAVLAGLWLLLARSRIGLVMRATQIDRET 182

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +    +       FA+ +A   +A       +      +      ++   +V++GG+ 
Sbjct: 183 ATAFGIDVDRVYAGTFALGAALAAIAAVLIVPIQQA--HYLMGGDPLLLSFIVVVIGGLG 240

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           SL     A  ++     +           +L       +                R   L
Sbjct: 241 SLRGTLVAALLIGVSDGVISTFFEPTLAKILATLLVALVLV-------------FRPQGL 287

Query: 340 LRLR 343
              R
Sbjct: 288 FGAR 291


>gi|92117223|ref|YP_576952.1| inner-membrane translocator [Nitrobacter hamburgensis X14]
 gi|91800117|gb|ABE62492.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Nitrobacter hamburgensis X14]
          Length = 291

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 93/265 (35%), Gaps = 12/265 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+++ G L +++      Y +GA+    L + +G+  W  + V
Sbjct: 12  LLVGLINGSFYALLSLGLAVIFGMLNIINFAHGAVYMMGAFCAYFLLNVFGIGYWPALIV 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  GM+M    LK+      +  L+++     I+        G +G+  A     
Sbjct: 72  APVLVGIFGMVMERTMLKWLTGLDHLYGLLLTFGLALIIQGVFQNYFGSSGLPYAIP--- 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                            F+   ++  +V++    +  +    + RT +    R   +N  
Sbjct: 129 -------DELQGGINLGFMFLPVYRGWVIVCSLVVCIATWYLIERTRLGAYLRAATENPT 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       + +      +AG   A         +      I+V ++V++GGM
Sbjct: 182 LVRAFGINVPRMITLTYGLGVGLAALAGVLSAPINQV--RPLMGADLIIVVFAVVVIGGM 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNF 303
            S+         L  +  L      
Sbjct: 240 GSIMGSIITGFALGIIEGLTKYFYP 264


>gi|119718323|ref|YP_925288.1| inner-membrane translocator [Nocardioides sp. JS614]
 gi|119538984|gb|ABL83601.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Nocardioides sp. JS614]
          Length = 290

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 91/298 (30%), Gaps = 26/298 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                ++ + A GL+I   S  +++      +  GA     + S +G   W+ + V    
Sbjct: 12  LYLGGVFALIALGLTISYSSTRVVNFAQGEYFVFGAGVAYYMQSVHGQPAWVALLVVLAG 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           + A G++     +            I+S +   + ++       +  +     L      
Sbjct: 72  AAAFGLVSERAIMLPIHRSGIHYAWIISTLAVALTMQSVYSKVFEGALLRPPPLVAGAVD 131

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           V                   ++ V+     +  +    LRRT+   A R    +     +
Sbjct: 132 VLGGK-----------VAYQIFIVIGAAVVIMVAYDQMLRRTSYGAAVRATAHDPDTTST 180

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
              ++    + +F VS+    +AG   +             +        +++GG+ S+ 
Sbjct: 181 FGISVRGIVVVSFVVSAMITAVAGMLVSPVLFV--EPTVGLAYTTNGFVAMVIGGLGSVR 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  I+  +  L   +                      +V  L +++L+R   L 
Sbjct: 239 GAIAGGFIVGILNALVVNLIG-------------PNYGQITVVCVLAVILLVRPTGLF 283


>gi|254502325|ref|ZP_05114476.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222438396|gb|EEE45075.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 287

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 98/304 (32%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I    +   +Y +FA GLS+V G + L++L       + AY  ++L +  G+  ++   +
Sbjct: 7   IVQGVLLGGLYALFAAGLSLVFGIMRLVNLAHGDLIVMAAYLILVLVTLIGVDPFVATLI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A I    G ++ +  L        +  L+++     ++              ++     
Sbjct: 67  AAPILFCIGWLLQMYVLNRTLGTDILPPLLVTFGLSIVIQNALQEGFSADSQRLSVGPLE 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                         P   V   +      L    +  ++     RT++  A+R   D+  
Sbjct: 127 TA----------SLPLGPVTIGVMPLLTFLSAILVIVALNQLFYRTSLGRAFRATSDDAT 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         +A  ++   + +A  +     +         +  I     VI+GG+
Sbjct: 177 TASLMGIRPQNIFATATGIAMVVVTIAALYLGTRANF--DPTIGPARLIYAFEAVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        I+     L   +N  +                    IA  +V+L++   
Sbjct: 235 GSLWGTLAGGIIIGVAQTLGAAINPEW--------------QILAGHIAFVIVLLLKPRG 280

Query: 339 LLRL 342
           L   
Sbjct: 281 LFPR 284


>gi|291523783|emb|CBK89370.1| monosaccharide ABC transporter membrane protein, CUT2 family (TC
           3.A.1.2.-) [Eubacterium rectale DSM 17629]
 gi|291528752|emb|CBK94338.1| monosaccharide ABC transporter membrane protein, CUT2 family (TC
           3.A.1.2.-) [Eubacterium rectale M104/1]
          Length = 549

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/297 (9%), Positives = 77/297 (25%), Gaps = 9/297 (3%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
              +   I ++  Q    +  A G++ ++   G   L+      +G  +  I+  +   +
Sbjct: 247 PLLTYNNILNILQQASPRMFLALGVAGLILLTG-TDLSVGRMVGMGMTTATIIMHQGINT 305

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
               +               +         L      ++  F         I+     + 
Sbjct: 306 G--SVFGHIFDFTGVPTGARVVIALLACIVLCTFFTSIAGFFTAKFKMHPFISTMANMLV 363

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           +   + +    V         P+  +        +++      A +     +T       
Sbjct: 364 IFGIVTYATKGVSFGAIEPVIPNMIIPKVNGFPTIIIWAVAAIAIVWFIWNKTTFGKNLY 423

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +  N +A      ++    L AF ++    G       A         +    ++  I+
Sbjct: 424 AVGGNPEAAAVSGISVFAVTLGAFVMAGILYGFGSWLECARMVGSGSAAYGQGWDMDAIA 483

Query: 272 IVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
             ++      GG+  +S +     I   +      +        +       +  T 
Sbjct: 484 ACVVGGVSFTGGIGKISGVVTGVCIFTALTYSLTILGIDTNLQFVFSGIIILVAVTL 540


>gi|256783518|ref|ZP_05521949.1| branched amino acid transport system permease [Streptomyces
           lividans TK24]
          Length = 290

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 84/291 (28%), Gaps = 14/291 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +  S       Y +   G+++V    G+++        +G     +     G  +W   
Sbjct: 6   DFTLSGLGAGTTYALVGLGVALVYQVTGVINFAQGDFVMLGGLGCAV-LHEAGTPLWAAA 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +   + A G ++ L   +   D      +I++      L     +  G    +     
Sbjct: 65  LTAIAATAAVGALLDLVVARRARDADGERLIILTIGASVTLEGAALLVFGPDSHF----- 119

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 V S      F            +  +        + L+L RT    A R     
Sbjct: 120 ------VPSFSEGRAFEVFGAHVVRQYVWCGVATGVAVLLMWLFLTRTLWGTAMRATAME 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   +  +     L AF +++A   +AG F A  +             +   +  ++G
Sbjct: 174 PEAVRLVGVSPARMSLLAFTLAAALGALAGVFLAPLQP--PDASVGVPFGLKGFTAAVIG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           G+ S +       ++  V     G     +   L +     +       + 
Sbjct: 232 GLVSPAGAVAGGLLVGLVEAFATGYLSSEYKDTLTYGLLLAVLLLRPTGLL 282


>gi|126736280|ref|ZP_01752022.1| ABC branched-chain amino acid transporter family, inner membrane
           subunit [Roseobacter sp. CCS2]
 gi|126714101|gb|EBA10970.1| ABC branched-chain amino acid transporter family, inner membrane
           subunit [Roseobacter sp. CCS2]
          Length = 336

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/331 (9%), Positives = 83/331 (25%), Gaps = 19/331 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           FL      +               + A G++++ G L   +       A G    + +  
Sbjct: 3   FLNAIVAFANFVFVPGLAYGAQLAIGALGVTMIYGILRFSNFAHGDTMAFGTAMTIWITW 62

Query: 87  RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            +              L +P   + +    +       +F  +  A   +++      + 
Sbjct: 63  GFLALGISFGPLPTALLALPFGIIATILLLLGTDWAVYRFYREQKASPVILVIVSMGVMF 122

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +    +        +               R     +  +  +      ++      A +
Sbjct: 123 VMNGVVRFIIGVRDIRFADGERFIITAREFRDMTGLNEGLAIKTTQAITVVVALIAMALL 182

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L +T    + R   DN+           +     + + +A    AG  +   +    
Sbjct: 183 FWFLNKTRTGKSMRAFSDNEDLALLSGINPDWVVKVTWMIVAALATTAGVLYGLDKSF-- 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309
                F   + + +  I+GG+ +         ++             +   +        
Sbjct: 241 KAFTYFQLLLPIFAAAIVGGLGNPLGAIAGGFVIAFSEVTITYAWKKVLVYLMPESLEPD 300

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                        +    L +V+L +   L 
Sbjct: 301 GLVQLLSTDYKFAVSFAILIIVLLFKPTGLF 331


>gi|116251512|ref|YP_767350.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|241204133|ref|YP_002975229.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|115256160|emb|CAK07241.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|240858023|gb|ACS55690.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 334

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 89/297 (29%), Gaps = 20/297 (6%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
              +   I ++ +Q  I  + A G++ V+     + L+     A+         +    +
Sbjct: 44  FFLTGGNISNVLLQTSINGVLAIGMTFVI-LTRGIDLSVGSVVALAGIVSASFSTTSATA 102

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
                P    I  A G+++G+      G  ++  ++        +L   + +T    G  
Sbjct: 103 AIAGAPYPVAIGLAVGILVGVACGAISGAIVSRFSVPAFVATLGMLSAARGLTLIYGGGR 162

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
               L      + +   F             +   ++ +  + A+    L RT       
Sbjct: 163 PVPALTPAFRWIGTGDVF------------GIPAPVIILAVVFAASWWILSRTRFGRYIY 210

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +  N  A  +    I   + + + +S    G+AG   +A            +  +  I+
Sbjct: 211 AVGGNPHAAKTSGIDIGRIRFTVYVISGGLAGLAGMLLSARTGSA-LPQAGIAYELDAIA 269

Query: 272 IVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            V++      GG+  ++       I+  +      M    +   +            
Sbjct: 270 AVVIGGTSLSGGVGRVTGTLIGALIIGVMNNGLDLMGIQSYYQQVLKGALIVGAVML 326


>gi|289643429|ref|ZP_06475549.1| inner-membrane translocator [Frankia symbiont of Datisca glomerata]
 gi|289506759|gb|EFD27738.1| inner-membrane translocator [Frankia symbiont of Datisca glomerata]
          Length = 309

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 89/305 (29%), Gaps = 19/305 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   +Y + A G ++V G L L++      + +GA+  +               ++++ 
Sbjct: 15  LMVGSLYAVIALGYTLVYGVLQLINFAHSEVFMLGAFGGLFAARGLLPGGATPSGLASVG 74

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
             A G+ +G          L               + +     G +   V       G  
Sbjct: 75  LVAAGLAVGAAGGAAAAFTLERVAYRPLRRRSAPRLAYLISAIGASLFAVNLAGKEFGRQ 134

Query: 163 VRSLIRFFR----FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +   F     F             V      +   +   + ++ +    R +  +  
Sbjct: 135 NVPVPDLFTNGTLFHLFGAQVSTLTVVVFGAAVVMLVLLDRLVAKSRLGQGIRAVAQDAD 194

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    +  F +     G  G  +A + +        F   +   +  +LGG+
Sbjct: 195 TAVLMGVNVERVIILTFVIGGLLAGAGGFLYAMTFNA--SYNMGFVPGVKAFTAAVLGGI 252

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L  V      +    +  ++ F             + L  ++++R   
Sbjct: 253 GNVRGAMLGGILLGLVESYGGYVFQASYKDVIAF-------------LVLVGILMVRPSG 299

Query: 339 LLRLR 343
           LL +R
Sbjct: 300 LLGVR 304


>gi|118473040|ref|YP_888451.1| ribose transporter permease RbsC [Mycobacterium smegmatis str. MC2
           155]
 gi|118174327|gb|ABK75223.1| ribose transport system permease protein RbsC [Mycobacterium
           smegmatis str. MC2 155]
          Length = 345

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/298 (13%), Positives = 84/298 (28%), Gaps = 22/298 (7%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
                S   + ++  Q+ I  + A G ++V+   G + L+     A+      +      
Sbjct: 54  APNFTSSANLTNVLQQVSITAIAAVGATVVILVAG-IDLSVGSVVALTGSIAALYLQHAI 112

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           LS      V+ ++S   G   G  +          A +        +      +TN    
Sbjct: 113 LSTGASAAVAVLLSLVVGTACGFLNGVLITFCRVPAFIATLATLTALRGIALLVTNS--- 169

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                            I    F    +     +   ++ M    A   + L R  I   
Sbjct: 170 -------------YPISINNSAFTQIGIGKVGAVPIPVIIMAVTFAVGYVILHRLKIGRR 216

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              +  N++A       +    L AF  +    G+A     A      P      E  ++
Sbjct: 217 IYAVGGNREAARLSGIRVSRVLLFAFTFAGLCAGVASVILTAKLSSGQPAGAVGFELDVI 276

Query: 270 ISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            ++V+      GG   L+       ++  +      MN  ++   +       +    
Sbjct: 277 AAVVVGGTSLFGGRGRLAGTFLGALVIAVLGNGLTLMNVPFYWQQIVTGAVVVVAVVL 334


>gi|33596705|ref|NP_884348.1| putative high-affinity branched-chain amino acid transporter
           membrane protein [Bordetella parapertussis 12822]
 gi|33573406|emb|CAE37390.1| Putative high-affinity branched-chain amino acid transporter
           membrane protein [Bordetella parapertussis]
          Length = 295

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 110/303 (36%), Gaps = 28/303 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +    Y M + GL+I+ G L +++      + +GA+   +L +  GLS W+ + V
Sbjct: 18  LLMGLMNGAFYAMLSLGLAIIFGLLNVINFLHGAQFMVGAFIAWMLLAWAGLSYWVALLV 77

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++     + +    L+       +  ++++     ++      + G +G+   +    
Sbjct: 78  APLVVAIGAVFVERLFLRHLYRLDHLYGMLLTFGLMLMVEGLFRKSFGSSGLAYPN---- 133

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +        F+    +  +V+     +  +I L + +T + +  R   +N  
Sbjct: 134 --------VIPGGMNLGFMFLPYYRAWVVAASLLVCQAIWLLIEKTRLGSYLRAATENPD 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +A  +   G+AG   A         +   +  I+V ++V++GGM
Sbjct: 186 MVRAFGIKVPVLLTLTYAFGAGLAGLAGVMAAPIYQV--SPLMGSNLVILVFAVVVIGGM 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L  +  L                  +     T++ + + +V+L++   
Sbjct: 244 GSILGSILTGFSLGAIEGLTKLF--------------YPQASATVIFLVMIIVLLIKPTG 289

Query: 339 LLR 341
           L  
Sbjct: 290 LFG 292


>gi|307943926|ref|ZP_07659268.1| urea ABC transporter, permease protein UrtC [Roseibium sp.
           TrichSKD4]
 gi|307772767|gb|EFO31986.1| urea ABC transporter, permease protein UrtC [Roseibium sp.
           TrichSKD4]
          Length = 378

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 55/367 (14%), Positives = 99/367 (26%), Gaps = 37/367 (10%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +   L L  +   +L         S  +I ++G  + + +     L +V G  G+LSL  
Sbjct: 4   FLGALALFTLTVTILSEGLGIGFLSTSFIKTLGKTLCLCLAALA-LDLVWGYCGILSLGH 62

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
              + +G Y   +          ++  ++ +        +           +  A L M 
Sbjct: 63  FAFFGLGGYMIGMWLMYARTEEIVVSSLANVPLPPTSEEIRDAIGTQIFGVVGGAELPMI 122

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF------------------ 172
             F + L     +     GI      +    +  S +                       
Sbjct: 123 WSFADSLTIQLVLVVLVPGILAFLFGWLAFRSRVSGVYLSILTQAMTLALSLYLFQNDSG 182

Query: 173 -----------------PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                              S     I   +              W       +A R IRD
Sbjct: 183 LRGNNGLSGLQNLPGAENVSQATLSILFLWGSALALGSFYIASAWFMSGKFGSAIRAIRD 242

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++     L   +   KL  F VS+    +AGA +      I+P       +I ++  V +
Sbjct: 243 DENRLRYLGYWVESYKLLVFVVSAIITAIAGALYYPQAGIINPAEIAPIASIYLVVWVAI 302

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG   L       A +  +     G           +   +      L+     LV L  
Sbjct: 303 GGRGRLYGAVIGAAFVSLISSWFTGGQAPDIPLGF-YTIKWVDWWLVLLGFGFVLVTLYA 361

Query: 336 SHSLLRL 342
              L  L
Sbjct: 362 PKGLGGL 368


>gi|331003866|ref|ZP_08327358.1| hypothetical protein HMPREF0491_02220 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412058|gb|EGG91455.1| hypothetical protein HMPREF0491_02220 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 323

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/318 (15%), Positives = 103/318 (32%), Gaps = 26/318 (8%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I  L+  ++  +      +  + K + ++  QI   ++ A G+++V+  LG + L+   
Sbjct: 20  IIALLVLAIFLTVFPATSSSFPTTKNVFNVLRQISTNMLLACGMTMVI-ILGGIDLSVGS 78

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
             A+         SRYG++I+L + +  +I    G   G    +           I++  
Sbjct: 79  VIALSGVFAAGCVSRYGMNIYLAMIIGVLIGIIIGAFNGFVISRTTIPPF-----IVTLA 133

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             NI      +  G + + V  + +                     Y       ++ M  
Sbjct: 134 TMNIARGLSGVYTGGSPVRVVSKEWQWI---------------GAGYIGIFPVPVIIMII 178

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +    +L + RT I      +  N  A      ++   K   +  S    G+AG   A+ 
Sbjct: 179 IFIISVLIMNRTKIGRYIYAVGGNTLAAKFSGISVSKVKFMVYTYSGLMAGLAGVILASR 238

Query: 253 RDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
                P     +E   + ++V+      GG   L        I+  +      MN   F 
Sbjct: 239 MYSGQPTAGDGAEMDAIAAVVVGGTSMSGGYGKLGGTLVGALIIGILSNGLNLMNVNSFW 298

Query: 308 SLLKFDCSFNMRHTTLMV 325
             +       +      +
Sbjct: 299 QTVVKGIVILLAVFIDYI 316


>gi|323702375|ref|ZP_08114040.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574]
 gi|323532681|gb|EGB22555.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574]
          Length = 337

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 85/313 (27%), Gaps = 25/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++   +L +      +   + ++  Q  I  + A G+ ++    G + L+     
Sbjct: 31  ALIGLLILCTILTILTPHFLTVDNLMNIARQSTINSLIALGM-LLALLTGGIDLSVGSVL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+   +  ++  + G+S  L I V   +  A G    +   K    +  I+T+    I +
Sbjct: 90  ALSIMTMGVVVVKLGMSPVLGIAVCLGVGIALGFTNAVLLTKLHLPHPFISTMGTMNIAR 149

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                                        +   +    + +  + 
Sbjct: 150 GLALTIT-------------------AATPVSGFPNSIQFLGAAFVGPVPVSFILVIIVF 190

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L+L RT        +  NQ+A       +       + +S     +AG       +
Sbjct: 191 TIFHLFLTRTTTGRYIYAVGGNQEAARLSGINVDRILTIVYTLSGFLTALAGLVLVGRVN 250

Query: 255 RISP-----DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P              I+      GG+ ++        I+  +      ++       
Sbjct: 251 SAYPLAGLSYETDAIAAAIIGGASFFGGVGTVWGTLIGALIMAVLRNGLNLLSVSAEMQT 310

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 311 VAIGIVIIAAVYV 323


>gi|258653228|ref|YP_003202384.1| inner-membrane translocator [Nakamurella multipartita DSM 44233]
 gi|258556453|gb|ACV79395.1| inner-membrane translocator [Nakamurella multipartita DSM 44233]
          Length = 345

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/320 (11%), Positives = 80/320 (25%), Gaps = 30/320 (9%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI------- 92
                   IY + A G ++V G L L++      + +G +         G +        
Sbjct: 32  IDGLAYGAIYALVAVGYTLVYGVLRLINFAHSEIFMLGMFGQYATLMLLGFTPSGNVYSE 91

Query: 93  ----------WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
                       ++   A+  GA   +  L     R         +++ I  + +++   
Sbjct: 92  GTFLTIMYLGIAMLGGMAVSGGAAVGLERLAYRPLRKRNAPSLVFLITAIGASFVLQEFV 151

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
                               +R +    +F             +L+    LS     ++ 
Sbjct: 152 HYVLPVLTGGELGGVNAQVPIRLVEPETQFTLFGADVTNITLIILVAAFVLSLGTDTFVN 211

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           RT      R +  +      +  +     +  F +     G A   +             
Sbjct: 212 RTKFGRGIRAVAQDPTTATLMGVSRERVIMLTFLIGGILAGAAALLYTLKIPNGIVYSGG 271

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F   I      +LGG             +  +     G                      
Sbjct: 272 FILGIKAFCAAVLGG-------------IGNLRGALLGGLILGVMENYGQVLFGTGWRDV 318

Query: 323 LMVIALFLVILMRSHSLLRL 342
           +  + L L+++ R   +L  
Sbjct: 319 VAFVLLILILMFRPTGILGE 338


>gi|328544148|ref|YP_004304257.1| branched-chain amino acid ABC transporter permease [polymorphum
           gilvum SL003B-26A1]
 gi|326413891|gb|ADZ70954.1| Branched-chain amino acid ABC transporter, permease protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 291

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 53/305 (17%), Positives = 106/305 (34%), Gaps = 28/305 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    Y++ A GLS++    G+++L+    YA+GAY  + +             +
Sbjct: 10  VVNGLVLGGYYLLIALGLSLIFSVGGIVNLSHGAFYALGAYVSIEIAKYL--GFAGGAIL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +I G  G++     L+       I +L+++  F  I  +   I  G A I V+     
Sbjct: 68  SPVIVGLLGILFERFILRRFYTADPILSLLVTFGFAMIGEQLIRILWGAAPIPVSMPAAM 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                 ++  +  ++L  +  + A I   L +TA     R       
Sbjct: 128 KGP----------VMVGDFLFSRYRLFLLAVVVVILAGIWFLLNKTAFGRVVRAGIQKPD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +     +   +      + GA FA     I           +   +V++GG+
Sbjct: 178 MVAALGIRLQPYMTAVIVLGVGLAALGGALFAP--ITIVHPAMGAEILTVAFVVVVIGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S   +  A  ++  V  +          +               M + +FLV+++R   
Sbjct: 236 GSFWGVIVAALMVGVVRGVTIHFVPAAGAAS--------------MYLLMFLVLMLRPRG 281

Query: 339 LLRLR 343
           L   R
Sbjct: 282 LFGER 286


>gi|316935589|ref|YP_004110571.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315603303|gb|ADU45838.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 342

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/299 (16%), Positives = 115/299 (38%), Gaps = 15/299 (5%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
                + +  G     +Y+  +  +I+   +FA  L +++G  G++SL     + +GAY 
Sbjct: 25  FVFWAVLIGCGLLFPSRYL--IMTEIVRLGLFALSLDLILGYAGIVSLGHAAFFGVGAYC 82

Query: 81  YVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
             +L     +    L + V+ +++   G       ++       + TL ++ + + +  +
Sbjct: 83  AGLLALHGIVGEPVLALLVAGLVAAVLGFATSFLVIRGVDLTRLMVTLGIALLLEALAER 142

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           +  IT G  G+        LG               F I+    ++  + + F+   +  
Sbjct: 143 FSDITGGTDGLQGIVMQPLLGI------------FEFDIFGKVGFWYTVAVLFVLFLLAR 190

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +    + R IR+N     ++   +    ++ +  ++ + G+AGA F  +    S D
Sbjct: 191 RVVHSPFGLSLRAIRNNPLRASAVGIPVNTRLVAIYTFAAFYAGIAGALFTQTTQLASLD 250

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           +F F  +  +I +++LGG   L        +   + E    +   Y+   +       +
Sbjct: 251 VFSFERSADLILVLVLGGTGYLYGGLIGAVVFKLLQETFSILTPQYWLFWIGLVLVVIV 309


>gi|327188507|gb|EGE55720.1| inner-membrane translocator [Rhizobium etli CNPAF512]
          Length = 285

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 78/299 (26%), Gaps = 22/299 (7%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +    + + A GL+I  G   +++L        G++   +  S  GL+ ++   +   +
Sbjct: 9   LVLGGTFALMALGLTIQYGVARIMNLAYGEFVIGGSFLTYLAVSAAGLNPFVTFLLVVPL 68

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 +     ++           +  +           +              F    
Sbjct: 69  CYLASHLCYDLIMRPLERRSRKTGRLEVDSILVTFGLMFLLQG-------VYLSSFGSGF 121

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                                    L    +  S+ L +++T    A R +         
Sbjct: 122 RGYDWLEGPVDIFGTKISSGRLVGALLAVAVGGSLYLAIQKTRWGMATRAVATRPAFAPL 181

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +         SAFAV  A     G   +  +             +  + +VI+GG+ +L+
Sbjct: 182 VGIDNERQARSAFAVGGALAAAGGVVLSMYQPF--TPTDGVFLTMKALVVVIMGGVGNLA 239

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
               A  IL  V      +                          L  V+L R + L  
Sbjct: 240 GAMAAGFILGLVEAGVSALVDPGLTLAAT-------------YAILLAVLLWRPNGLFG 285


>gi|299536149|ref|ZP_07049463.1| branched-chain amino acid ABC transporter, permease [Lysinibacillus
           fusiformis ZC1]
 gi|298728424|gb|EFI68985.1| branched-chain amino acid ABC transporter, permease [Lysinibacillus
           fusiformis ZC1]
          Length = 290

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 106/307 (34%), Gaps = 27/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++  + A GL+++ G + +L+      +  GAY+  I       S  + I  
Sbjct: 8   IINGLATGMLIFLLAAGLTLIFGLMDVLNFAHGGLFVWGAYA-GIFTYMLTESFIVGIIG 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G++     +        I  ++++     +L +   +  G  G+ V    Y 
Sbjct: 67  AIVTGALLGLLTEKFIITPVYGN-HIQQILITLGLMLVLQELIKVVFGPNGVAVKTPSYL 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G           +    VI   +  ++++    +       L+RT I    R    +++
Sbjct: 126 AG----------SWEIGDVIIIKYRLFIIVIGFVIFGIFQYMLKRTKIGLIVRAGVQDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I    L  F V +A   ++G   A     I  +M      I+   +V++GGM
Sbjct: 176 MAQALGIHIKRVFLYVFMVGAALAALSGMLMAPYSGVIYAEM-GMEYAILGFIVVVIGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S S    A  ++                          +    + +I + +V++ R   
Sbjct: 235 GSFSGSLLAAILVGLAGSFMAYY--------------VPVLSLAVNMILMAIVLIFRPQG 280

Query: 339 LLRLRTP 345
           L  +R  
Sbjct: 281 LFAMRKE 287


>gi|90421198|ref|ZP_01229099.1| permease protein, ABC-type branched-chain amino acid transporter
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90334575|gb|EAS48358.1| permease protein, ABC-type branched-chain amino acid transporter
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 308

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 94/301 (31%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   + V+ A GL+I+ G +G++++       +GAY   ++   +   +  L+P+S  +
Sbjct: 22  LVLFSVLVLMALGLAIIFGQMGVINMAHGEFMILGAYVTYLVAGFFEAFLPALVPISFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +                  L     +       +L  W      +           +G T
Sbjct: 82  AVVLAFFASGALGVAVEMSL--IRFLYKRPLDTLLATWGLSLILQQTYRTVFGAREVGVT 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           + S +      +  +   I    V+     ++  + L + R+ +    R +  N+    +
Sbjct: 140 LPSWMMGSLPLTDIIEIPINGLIVMAITLLITLGVYLVMFRSRLGAQTRAVVQNRTMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           F +     G+AG+ F       +         +    +V+ GG  SL 
Sbjct: 200 VGIDTEKVDRMTFGLGCGIAGVAGSAFTMIGS--TGPSAGQLYIVDTFLVVVFGGAASLL 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++ +  ++++R   L  L
Sbjct: 258 GTIASAFTISQAQSTMEFFLSGSMAK-------------VLTLLTVVGILMLRPQGLFTL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|256829192|ref|YP_003157920.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
 gi|256578368|gb|ACU89504.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
          Length = 317

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 89/291 (30%), Gaps = 13/291 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +YI S      IY + A G  +V  ++G+++   V    +G           GL     +
Sbjct: 38  QYIFSGLTGGAIYALIALGFCVVSNTMGIVNFIQVDFVTLGGMFMFSALFALGLPTVPAL 97

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +S  +     M++    L+       +  + ++     IL     I  GK  + +    
Sbjct: 98  GLSVCLVALVAMVVERIGLRPARSDNHLVLIFLTVGLSIILRGIIKIVWGKNRMALPPLT 157

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
             +   +                     ++L       A +  +  RT++    R +  N
Sbjct: 158 PDVPVQILG-----------ASVLPQALWILGLTVVAIAVLTWFFHRTSLGLCMRAVASN 206

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             A   +       +L+++A++ A  G+AG                    +   +  ILG
Sbjct: 207 PTAAAVVGIASGRIRLTSYAIAGALGGLAGVLVTPITTL--NYDVGVLLGLKGFAAAILG 264

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           G  S          L  +  L  G     +  ++ F     +       + 
Sbjct: 265 GFGSFPGAILGGLGLGLLESLSAGYLSSAYKDVVAFVVLLLVLFVRPKGLL 315


>gi|119944127|ref|YP_941807.1| ribose ABC transporter permease protein [Psychromonas ingrahamii
           37]
 gi|119862731|gb|ABM02208.1| ABC ribose transporter inner membrane translocator [Psychromonas
           ingrahamii 37]
          Length = 324

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 98/312 (31%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++  +++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 26  LIALILLIVVVAFMNEYFFTVNNLLNILRQTSVIAIIAAGMTLVILTAG-IDLSVGSVLA 84

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   ++        + I + +P+S +     G   G    K +      ATL+M  + + 
Sbjct: 85  LCG-AFAASMISLEIPIAIAVPISLLGGALLGCATGGIIAKGKVQAFI-ATLVMMTLLRG 142

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + +       AG                      F      Y   +   +  M  + A
Sbjct: 143 VTMVYTDGRPISAGYTDVA---------------DNFAWFGTGYVFGIPVPVWIMIAVFA 187

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +I   L  T        +  N+ A       +   K+  +A+      +AG    +    
Sbjct: 188 AIWYLLNHTRFGRYVYALGGNESATRLSGINVDRVKIGVYAICGLLSALAGIIITSRLSS 247

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+      GG   ++       I+  +      M+   +  ++
Sbjct: 248 AQPTAGMGYELDAIAAVVVGGTSLAGGRGRITGTLIGALIIGVLNNALNLMDVSSYFQMI 307

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 308 VKALVILLAVLV 319


>gi|116750525|ref|YP_847212.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
 gi|116699589|gb|ABK18777.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
          Length = 310

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/315 (13%), Positives = 99/315 (31%), Gaps = 19/315 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           + + +       Y + A G ++V G L L++      + +GAY    + +         +
Sbjct: 8   QNVLNAMQWGSFYALIALGYTLVYGVLLLINFAHGDIFMVGAYIGFFIATLLLGHYTAAL 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW-----KPITNGKAGIY 151
           P +   +    + + L  +   G  +AI  +    + +  + +        +        
Sbjct: 68  PFALSPTAIFVLSLILTMILTAGVGVAIERVAYRPLRRKGVSRLYVVITALMCGLILENG 127

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
               L     +   L+    +    V+       V++    +   +   +R+T I  A R
Sbjct: 128 NLALLGASRRSFPELLPKAVYTVGGVVISNIKILVIVTTILVFLLLETIVRKTKIGMAMR 187

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            I  ++ A   +   +    +  F + S+   +AG  FA +   + P M           
Sbjct: 188 AISYDRMAVPLMGIPVDTVIVFTFILGSSMAALAGVLFATAYPVLEPYM-GALVGWKAFI 246

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             +LGG+  +        +L  +              L+ F               L + 
Sbjct: 247 AAVLGGIGEIRGAFLGGFLLGFIEIFVAAYFPSTLRDLIAFS-------------ILLMF 293

Query: 332 ILMRSHSLLRLRTPS 346
           + ++   +  +   +
Sbjct: 294 LTVKPTGIFGVARAT 308


>gi|186471103|ref|YP_001862421.1| monosaccharide-transporting ATPase [Burkholderia phymatum STM815]
 gi|184197412|gb|ACC75375.1| Monosaccharide-transporting ATPase [Burkholderia phymatum STM815]
          Length = 343

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 98/296 (33%), Gaps = 13/296 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K+  +  L+A+V    +      +       S+ +  + Y+  A    I+    G + 
Sbjct: 24  IQKFAALGSLVALVIAFSVASAAFFSVGNMMTVSLQVTSIAYLGVAATCVII---TGGID 80

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+   S  +L          ++    ++ G+    +    +   G    IATL
Sbjct: 81  LSVGSVLALAGVSAALLTKAGLPVPVAMLC--GVLVGSLCGYVNGICVTRMGLPPFIATL 138

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            M  + + + ++                L        S I    FP +      +   ++
Sbjct: 139 GMMLVARGVALQITGARPVSDLSDAFGALGNGAFFRISHIGADGFPDTTFPGIPYPVVIM 198

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +    A ++    +T++      +  N +A       +    L  + +S A  G+ G 
Sbjct: 199 IVLFVAGAILL---SKTSLGRHIYAVGSNAEAARLSGVNVRGVTLFTYVLSGALAGVTGC 255

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
              +      P+     E   + S VI     +GG+ ++S  A    ++  +    
Sbjct: 256 VLMSRLVTGQPNEGVMYELDAIASAVIGGTSLMGGVGTISGTAIGAFVIGVLRNGL 311


>gi|73539968|ref|YP_294488.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72117381|gb|AAZ59644.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 304

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 84/296 (28%), Gaps = 13/296 (4%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           +Y + A G  ++  + G+ +          A + V L  +       +I    ++     
Sbjct: 17  MYSLVALGFVLIYKASGVFNFAQGAMVYFAALAVVGLMDKGLPMWAAVIGAFVVMILVGM 76

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
                   K          +          I       G   +   + +  +   +    
Sbjct: 77  STERFVLRKLVNQPPITLFMAT--------IGLSFFLEGLGPLLFGNEVRPINLGIVDEP 128

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                    V+   F          L  S+ L+ + T +  A R + D+ +A  SL   +
Sbjct: 129 IEAILTRFNVVLSKFDLAAAAIAGLLVGSLALFFQYTKVGRALRAVADDHQAALSLGIPL 188

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
                  + V+     +AG  + +               +  + ++ILGG TS+      
Sbjct: 189 QHIWAIVWGVAGFVALVAGMLWGSRN---GVQFALTLTALKALPVLILGGFTSVPGAIVG 245

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
             I+    +L        F S    +          +   L   +L+R   L   +
Sbjct: 246 GLIIGASEKLAEIYIPPVFQSAFGGNFGGIEGWFPYVFALL--FLLVRPEGLFGEK 299


>gi|39934808|ref|NP_947084.1| putative branched-chain amino acid transport system permease
           [Rhodopseudomonas palustris CGA009]
 gi|192290332|ref|YP_001990937.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|39648658|emb|CAE27180.1| putative branched-chain amino acid transport system permease
           protein [Rhodopseudomonas palustris CGA009]
 gi|192284081|gb|ACF00462.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 307

 Score = 64.5 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 67/326 (20%), Positives = 122/326 (37%), Gaps = 36/326 (11%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  +   ++            YI  +      + +FA    ++ G  G ++         
Sbjct: 8   LFWIALLVVAVAATLPLYVSGYILGLLTVAFYFGVFAMSWDLLFGFAGEVNFGPTFLIGT 67

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  I+ + YG+S +  I + AM +   G ++ LP+L+ RG Y  + TL+   + QN 
Sbjct: 68  GAYTAGIVNNLYGVSPYFCIFIGAMAAVVAGFVLALPALRVRGPYFGLTTLVAVLMLQNF 127

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           ++ +  +T G+ G+ + D +                     I     Y++ LG   +S +
Sbjct: 128 IVVFADLTGGEIGLTIPDVIT--------------------INAGANYWIALGFMTVSGA 167

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           I+  L ++ I    +    +     +L   I+  KL AF VS+ F G++GA         
Sbjct: 168 ILYGLSQSPIGLVLQASGQDPVQAGALGFNIVKHKLFAFVVSAFFSGLSGALLVFYFGTA 227

Query: 257 SP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           S   +   +  + VI   +LGG  ++   A     LI   E                   
Sbjct: 228 SVGTVVDVAVGVNVIVAAVLGGRRTVIGAALGAVFLIVAGEFLR---------------P 272

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                T ++     LV+L      L 
Sbjct: 273 TGELATFIVSAIALLVVLFFPGGFLG 298


>gi|330978922|gb|EGH77981.1| inner-membrane translocator [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 246

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 78/255 (30%), Gaps = 22/255 (8%)

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
           +   I   +  + +++G  G ++   + K   +   +A LI +     IL  +  I+ G 
Sbjct: 8   FPFLILGTLIFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGA 67

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
               V   L                 S FV       ++L+        +   ++ T + 
Sbjct: 68  RQQGVPTLLEGAWRFEVG--------SGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLG 119

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
              R  + ++K    L           F + +A   +AG     +          F   I
Sbjct: 120 RMCRATQQDRKMASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYA-GFIIGI 178

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              +  +LGG+ SL        IL        G+    +  +  F               
Sbjct: 179 KAFTAAVLGGIGSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFG-------------L 225

Query: 328 LFLVILMRSHSLLRL 342
           L L+++ R   LL  
Sbjct: 226 LVLILIFRPQGLLGR 240


>gi|309790178|ref|ZP_07684750.1| inner-membrane translocator [Oscillochloris trichoides DG6]
 gi|308227763|gb|EFO81419.1| inner-membrane translocator [Oscillochloris trichoides DG6]
          Length = 293

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 105/304 (34%), Gaps = 24/304 (7%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            S      IY + A G  ++  S  +++        IGAY   +   + GL   + + ++
Sbjct: 9   LSGIANGAIYALVALGFVLIFKSSDVINFAQGELLMIGAYLTYMTVQQIGLFWPIGVVIA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++   G+++    L+      AI+ ++++    ++L        G   +     L   
Sbjct: 69  VILAAVVGVLIEQLVLRPLIGEPAISVIMVTIGLSSVLRAIVGAIWGITPLPAPQFLPRD 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +           +  +  +               + ++ R ++   A R + D+Q+A
Sbjct: 129 PVNILGATVGMDKLLAIGLALLLF-----------GILTVFFRTSSEGIAMRAVADDQQA 177

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             S+  +I      A+A+++      G    +    +S  +       +V  +VILGG+ 
Sbjct: 178 ALSMGISIKRVWAVAWAIAAVTAAAGGILLMSIFGGVSGTIAHVGL--LVFPVVILGGLD 235

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        I+  +     G                         I L L++L+R + L
Sbjct: 236 SIPGAVVGGIIIGLIEAFAGGYLPPELGMGHVTP-----------FIVLVLILLVRPYGL 284

Query: 340 LRLR 343
              +
Sbjct: 285 FGQK 288


>gi|307153562|ref|YP_003888946.1| inner-membrane translocator [Cyanothece sp. PCC 7822]
 gi|306983790|gb|ADN15671.1| inner-membrane translocator [Cyanothece sp. PCC 7822]
          Length = 377

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 79/238 (33%), Gaps = 3/238 (1%)

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           ++M                  +S  +++              I +          +  + 
Sbjct: 138 LVMIAILTLLAVWAEWQLWRALSSQWRSYQEIRDKSYQPTKPISLIIWGIIATGLMVVVY 197

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                  S   Y+  +  ++L +   +   + +L R+      + IR++++   +L   +
Sbjct: 198 VNGVIALSNYRYQAGLMLLILLVLAATYWGLEFLVRSPWGRVLKAIREDEQVPKALGKNV 257

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
            + KL A  +  A  G+AGAFFA     I P  F+         IV+LGG  + +     
Sbjct: 258 FWYKLQALMLGGAIAGLAGAFFAWQITTIYPTNFEPLLTFYAWIIVVLGGAGTNAGTLLG 317

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
             I      +   +  +  N               ++ + L ++++ R   +L  +  
Sbjct: 318 AIIFWAYDSITRFVLPHIGNFD---SSQEGAFRIMVIGLILMVLMIWRPQGILGKKEE 372


>gi|145591962|ref|YP_001153964.1| inner-membrane translocator [Pyrobaculum arsenaticum DSM 13514]
 gi|145283730|gb|ABP51312.1| inner-membrane translocator [Pyrobaculum arsenaticum DSM 13514]
          Length = 319

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 99/315 (31%), Gaps = 12/315 (3%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           + +    + +    I   IY + A GL++   +  + S        IGAY+  ++ +   
Sbjct: 3   ILSGVDYQTLFRAIILSNIYALMALGLNLTYITTKIPSFAHGDLATIGAYTSYLILTFLV 62

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           + + L   V A    A  +      L +   +  +     S     I             
Sbjct: 63  IPLGLPANVYATFPIAALVAGATAWLTYVTVFRPMIRRGASITSLMIASFGIHYVLFAIV 122

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL---LGMCFLSASIILWLRRTAI 206
             +AD +      +   I   R+   +   +     ++   + +  ++A + L L +T  
Sbjct: 123 AIIADYVQNTYKVLSRNILLSRWEYVWPGTDFLTSSLINTTIAVAVVTALLYLLLYKTRY 182

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   DN     ++   +      A+ +  A  G+AG + A        +   +   
Sbjct: 183 GIVMRASIDNLYLARAVGINVERVFAVAWILIGAVTGIAGVYLAMFYTM--TEELGWLRL 240

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            +V    ++GG++++        ++     L           +L+           +   
Sbjct: 241 ALVFVASVVGGLSNIYGAVLGGYVVGLSTVLGAAY-------ILRPLGVPTEFQLAIPFA 293

Query: 327 ALFLVILMRSHSLLR 341
            +  ++L     L  
Sbjct: 294 FVIAILLFAPQGLAG 308


>gi|113866317|ref|YP_724806.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113525093|emb|CAJ91438.1| ABC-type transporter, permease component: HAAT family [Ralstonia
           eutropha H16]
          Length = 304

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 89/305 (29%), Gaps = 13/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  L+Y + A G  ++  + G+ +          A + V L  +       +I  
Sbjct: 8   LIGGLLSGLMYSLVALGFVLIYKASGVFNFAQGAMVYFAALAVVGLMDKGLPMWAAVIGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++             K          +          I       G   +   + +  
Sbjct: 68  FVVMILVGMSTERFVLRKLVNQPPITLFMAT--------IGLSFFLEGLGPLLFGNEVRP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   +          +  ++   F          L  S+ L+ + T +  A R + D+ +
Sbjct: 120 INLGIVDEPIESIMTNFNIVLSKFDIAAAAIAGLLVGSLALFFQYTKVGRALRAVADDHQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL   +       + V+     +AG  + +               +  + ++ILGG 
Sbjct: 180 AALSLGIPLQNIWAIVWGVAGFVALVAGMLWGSRNGV---QFALTLTALKALPVLILGGF 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+    +L        F S+   +          +   L   +L+R   
Sbjct: 237 TSVPGAIVGGLIIGASEKLAEIYIPPVFQSMFGGNFGGIEGWFPYVFALL--FLLVRPEG 294

Query: 339 LLRLR 343
           L   +
Sbjct: 295 LFGEK 299


>gi|307543703|ref|YP_003896182.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307215727|emb|CBV40997.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 439

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 87/268 (32%), Gaps = 25/268 (9%)

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           W    +   ++G  G  +G   L  R DYLAIAT+ ++EI +  L     +T G A +  
Sbjct: 181 WFGWIIGGALAGGVGYFIGHVCLGLRSDYLAIATIGIAEIIKAFLKNADWLTRGTATVSP 240

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                                  F +       V   +      ++            R 
Sbjct: 241 LPWPVPGPG-----------DVGFTLARALYLSVTAVIIAAIFFLLHRAYNAPWGRMIRA 289

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN-IIVIS 271
           IRDN+ +  ++   I   +L  F +    +G+ GA  A+      P  +    +  +V+ 
Sbjct: 290 IRDNEVSAAAMGKDINKRRLEIFVLGCILMGIGGAVLASFNSLFDPQGYLPLNHTFLVLV 349

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR------------ 319
           +VILGG  +         ++  +  +   +  +     +    +                
Sbjct: 350 MVILGGPGNNLGTIFGAVVVYIIWLMSEPLALFLMQLAVDIGSATFGWDAPTNLDSRALQ 409

Query: 320 -HTTLMVIALFLVILMRSHSLLRLRTPS 346
               ++ + + LV+      +L  +   
Sbjct: 410 ARVFVIGLLISLVLRFAPKGMLPEKVRH 437



 Score = 42.9 bits (99), Expect = 0.074,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 32/99 (32%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +   +  +  L   L + A     Y   M ++   Y + A GL+I  G  G  +  
Sbjct: 19  RRFPLRESVIFLALLAAVLVVYAAMGSAYGTRMLVEAACYAILALGLTIQWGYAGQFNAG 78

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
            +   A+G +  +        + W       +      M
Sbjct: 79  VMGFVALGGFCAMFFSIPVNEAFWSSELPGELGLALLYM 117


>gi|158426211|ref|YP_001527503.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158333100|dbj|BAF90585.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 342

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 93/306 (30%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  I   +Y +      ++  +  +++        IGA++   L + + +       +
Sbjct: 55  IINGLIIGTLYGVVGMCFVLIYKASQVVNFAQGEFLLIGAWACWWLLTYWQIPFIWGFLI 114

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S       G+ + +  L+       I+ ++++               G            
Sbjct: 115 SIAFMMVFGLALQVLVLRPLIGEPIISVIMVTIGLSIFFQALMKWMFGTFAQPFPPIFPV 174

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +  L     +  S  +                     + + + I  A R    +Q+
Sbjct: 175 AKVEILGLQVQSAYLMSTGVSLAI-----------MVGFAWFFKYSRIGLAMRATAFSQQ 223

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  ++      ++ +S++   +AG          S   +     I V   VILGG+
Sbjct: 224 VAQSLGISVRQMFALSWGISASVSAVAGVVVGIVNGVSSALSY---FGIKVFPAVILGGL 280

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +  +    +  +              +      AL ++++++ + 
Sbjct: 281 DSILGAVVGGLIIGLLENIAHYFDSQFLKW--------GNLYEIAPFYALIVILMIKPYG 332

Query: 339 LLRLRT 344
           L   R 
Sbjct: 333 LFGTRD 338


>gi|312879926|ref|ZP_07739726.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Aminomonas paucivorans DSM 12260]
 gi|310783217|gb|EFQ23615.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Aminomonas paucivorans DSM 12260]
          Length = 286

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 94/303 (31%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I    +  L+Y + A GLS++ G + +++        +  Y    +G    +   +    
Sbjct: 8   ILDGAMSGLLYALVAAGLSLIWGVMDVINFAHGEFLMVAMYLSYWIGFLAHVDPIVSWIA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           SA      G +     +       A+A L+ +     +L  +                  
Sbjct: 68  SAAFLFLLGAVTYKLIVSRCLGKAAMAPLLATFGLSMVLKNFCLNRFSPN---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+   +     ++  +      L    + A + + L+++ +  A +    +++
Sbjct: 118 FRLLSGTLLEGKKILLGELVIPLPQLVTSLFALGVLALLYVMLKKSRLGWAIQATAMDRE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +        L  F +  A +G+AG    +               +I   +V +GG 
Sbjct: 178 AAELMGIDTEKIFLLVFGLGGACVGIAGGLLPSYLAV--HPEVGGLFGLIAFMVVAMGGF 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++  V           F  +  F                 +VI++R   
Sbjct: 236 GSIPGALIAALMIGLVESFTGFYVAPVFKYVAVFGIY-------------LVVIMIRPKG 282

Query: 339 LLR 341
           L  
Sbjct: 283 LFG 285


>gi|119899339|ref|YP_934552.1| ABC transporter permease [Azoarcus sp. BH72]
 gi|119671752|emb|CAL95666.1| ABC transporter permease protein [Azoarcus sp. BH72]
          Length = 288

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 103/303 (33%), Gaps = 28/303 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLSIWLLIP 97
           I +     L+  + A GL++V G +G+++L     Y +GAY ++ +      L + + + 
Sbjct: 10  ILNSLQYGLLLFLVASGLTLVFGIMGIINLAHGSFYMVGAYLAFALTSLTGNLMLSIALG 69

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           +         +   L +  ++ D+L    L    I     ++   + +   G+ +     
Sbjct: 70  IPLAFVFGALLEWLLFAHLYKRDHLEQVLLTYGLILIFEELRSLAVGDDVHGVDIPALFS 129

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                  +           + Y ++   + +    L+ ++   ++RT +    R    ++
Sbjct: 130 ASIPLSDT-----------LSYPVYRILISVVCLVLAGALWWLMQRTRLGMMIRAGSHDR 178

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +L   I     + FA+      +AG   A             S  II   IV++GG
Sbjct: 179 DMVQALGIDINLLYRTVFALGVVLAALAGMLAAPISSV--YPGMGSSVLIISFVIVVIGG 236

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+     A  ++         +                      + + + +V+L R  
Sbjct: 237 IGSVWGALVAALLIGFADTFGKVLLPDLAG--------------LAVYLVMAVVLLWRPE 282

Query: 338 SLL 340
            + 
Sbjct: 283 GIF 285


>gi|167838698|ref|ZP_02465557.1| sugar ABC transporter, permease protein [Burkholderia thailandensis
           MSMB43]
          Length = 329

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/314 (10%), Positives = 87/314 (27%), Gaps = 29/314 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ V   ++L        + +    +  Q  I  + A G++ V+     + L+     
Sbjct: 31  IPIIFVALCVVLAFASPYFLTWRNWSDILRQTSINGILAIGMTYVI-LTKGIDLSVGSVL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      + G+            +++  G                   +   + +    
Sbjct: 90  ALAGIVSGLAGAA------GHGLAASLAVGIACGAALGAINGVTIARFNVPPFVATLGML 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           ++      I N  + +                     + S  +     +   +L    ++
Sbjct: 144 SVARGVTYIVNDGSPVANLP---------------DDYLSLGIGKLGPLGMPVLIFAAVA 188

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    LR T        +  N+K+  +    +     S + VS A  G+AG   AA   
Sbjct: 189 LACWWVLRYTTYGRYLYAVGGNEKSARTSGIGVRKVVFSVYVVSGALAGLAGMILAARTT 248

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                    S  +  I+ V++GG         +        ++  +      +    +  
Sbjct: 249 SA-LPQAGVSYELDAIAAVVIGGTSLSGGQGGVVGTLFGALLIGVINNGLNLLGVSSYYQ 307

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 308 QIAKGLIIVLAVLI 321


>gi|149915302|ref|ZP_01903830.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. AzwK-3b]
 gi|149811023|gb|EDM70862.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. AzwK-3b]
          Length = 434

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 87/270 (32%), Gaps = 21/270 (7%)

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
             PV  +++     I+G  +L  R DYLAIATL ++EI   +L     +  G   +    
Sbjct: 165 AWPVGGLLAAGAAWIIGKAALGLRSDYLAIATLGIAEIILAVLKNEDWLARGVKNVNGLP 224

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS---------IILWLRRTA 205
           R       +++   F      F    +    + + + +                    + 
Sbjct: 225 RPIPYEVDLQNDPGFVATVQGFGFDPVTASSITVKLGYAGLFTCVLLVILVAAQLALNSP 284

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-ISPDMFKFS 264
                R IRDN+ A  ++   +    L  F + SA  G+AGA       + I        
Sbjct: 285 WGRMMRAIRDNEVAAEAMGKDVTRRHLQVFILGSAVCGIAGAMMTTLDGQLIPTSYQPLR 344

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR----- 319
              +V  +VI+GG  +         ++  +      M  +    +       +       
Sbjct: 345 FTFLVWVMVIVGGSGNNFGAVLGGFLIWFLWVQVEPMGLWLMQVITAPLAEGSALKAHLL 404

Query: 320 ------HTTLMVIALFLVILMRSHSLLRLR 343
                     M + L LV+      L+  +
Sbjct: 405 ESAAHMRLLTMGVILLLVLRFSPRGLIPGK 434



 Score = 38.7 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 36/104 (34%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
                   L +  G  +S      +    LI  + A G+++  G  GL ++  +   A+G
Sbjct: 9   ALFGLVAGLIVLTGIMQSWNSALLIVNMGLISAIMALGVNLQWGFAGLFNVGVMGFVALG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             + V++        W       +   A G  + + ++  R   
Sbjct: 69  GLAAVLVSMPPTTEAWAAGGARVLAGLATGAGVLVATILVRRKM 112


>gi|27381514|ref|NP_773043.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354682|dbj|BAC51668.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 344

 Score = 64.5 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 49/289 (16%), Positives = 115/289 (39%), Gaps = 18/289 (6%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
              S   +  + +++      A   +++ G  GL+++   +   +G+YS   L ++  L+
Sbjct: 35  PWLSTFAVQRLLVEVFTLFAVALAWNLLAGYGGLVAIGLHVFVGVGSYSLFALSNQLHLN 94

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            +LL+P +A+ +    ++   P  +  G Y A+ T +++E+ + + +    +  G     
Sbjct: 95  PFLLLPAAAVFAAVFALVSAWPMFRLSGAYFAVGTWVLAEMMRILTLNAPWLGAG----- 149

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                         +                +Y+  L +   S      + R ++  A  
Sbjct: 150 ------------GGMPLEAMSDIDRWTRNAGVYWAALFVGVGSLVASRQVLRGSLGLALM 197

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENIIVI 270
           ++RD++ A  +    +  AK++ + + +   G+AGA    +  +++PD  F  +     I
Sbjct: 198 SVRDSEPAALASGVPVARAKIALWVLCAVISGLAGAVSYMNTLQVTPDASFSLNWTAAAI 257

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            I +LGG+ +L      T +   + E   G   +YF  +        + 
Sbjct: 258 FIAVLGGIGTLEGPIVGTIVYFLLRETFAGYGAWYFIGVGLLAILTMVA 306


>gi|152980096|ref|YP_001353241.1| ABC-type branched-chain amino acid transport system permease
           component [Janthinobacterium sp. Marseille]
 gi|151280173|gb|ABR88583.1| ABC-type branched-chain amino acid transport system permease
           component [Janthinobacterium sp. Marseille]
          Length = 424

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/325 (12%), Positives = 103/325 (31%), Gaps = 22/325 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L       L +      +Q    S+  Q+  +++FA   ++++G  G+LS    +   +G
Sbjct: 13  LIWGGFTALLVVAPLIFTQSASLSLLCQMGTFIIFALSYNMLLGQGGMLSFGHAVYSGLG 72

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A+  +   +        +      + G    +       +     +  T  M  +    L
Sbjct: 73  AFCAIHAINLVAAGNLHIPITLIPLVGGVAGLFFGALFGYVTTRKSGTTFAMITLGIVEL 132

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +    +                G      +    F       +I +YY++ G   LS   
Sbjct: 133 VFACSLM-------FPGFFGGEGGIFTDRVVGEAFFGITYGPQIQVYYLIAGWLLLSTVA 185

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +    +T +      +RDN +    +     + +     +S+ F G++GA  A + + +S
Sbjct: 186 MYAFTQTPLGRIINAVRDNPERAEFVGYDPQWVRYLTLMLSAFFAGISGALTAINFEIVS 245

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            +      + +++    +GG            + + +  +       +            
Sbjct: 246 AENVSALRSGMILLFTFIGGTAFFFGPILGAIVGVFLTVVLSNYTNAW------------ 293

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                 + +   L++++    +  L
Sbjct: 294 ---QLYLGVFFVLIVMLAPGGIAGL 315


>gi|317053045|ref|YP_004119399.1| inner-membrane translocator [Pantoea sp. At-9b]
 gi|316953372|gb|ADU72843.1| inner-membrane translocator [Pantoea sp. At-9b]
          Length = 705

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 95/299 (31%), Gaps = 21/299 (7%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
           FL    +   +  +  Q   + +   G+SIV+   G + L+    +A+ A++ V   S  
Sbjct: 46  FLPGFLALSSLSDLSRQWGEFALVVMGMSIVM-LGGGIDLSVGAIFALSAFTAVSANSLL 104

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            L +W  + +S +     G   G+     R        +    +                
Sbjct: 105 ALPLWQTLLLSLVTGALAGAFNGVLIGYLRLRAFLTTLVSFILLRTLF------------ 152

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                  + +     +S +   ++          +    +    ++ ++ L L R  +  
Sbjct: 153 ---DILVVKYASQIQQSAVDNPQWDFIGEESIGPLPVSFVLAVVVALALHLLLSRMRLGW 209

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
             + +  ++++ ++    +       + +S    G+AG   AA    + P      E + 
Sbjct: 210 HIQAVGGSRRSAWNTGIAVRRTVFITYVLSGLCCGLAGFLLAARMAGVGPGTGLGLEIMA 269

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + V+      GG  S+ K      I++ +      +     ++ L            
Sbjct: 270 LTAGVVGGNSLGGGRGSIMKGVLGAIIVLLLTNALIRLGLPSGSTQLVLGLVLIAAVFL 328


>gi|260461188|ref|ZP_05809437.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259033222|gb|EEW34484.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 295

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 107/303 (35%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y M + GL+++ G L +++      Y +GA+   +L +  G+  W  + +
Sbjct: 16  LLVGLINGSFYAMLSLGLAVIFGLLRVINFAHGAQYMLGAFVGYLLLTYLGVGYWPALVL 75

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I G  G+++   +L    D   +  L+ +     +L        G +G   A     
Sbjct: 76  APLIVGVFGVVVERLALSRLYDTDPLYGLLFTFGLALVLEGIFRYYYGVSGNAYAVPPLL 135

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G               F+    +  +V++    +       + +T + +  R   +N +
Sbjct: 136 SG----------GTNLGFMFLPNYRGWVVVASLIVCFGTWALIEKTRLGSYLRAATENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       + + SA  G+AG   A         +      I+V ++V++GGM
Sbjct: 186 LVQAFGVNVPLLLTLTYGLGSALAGLAGILAAPIYQV--SPLMGSDLIIVVFAVVVVGGM 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L     L                  +      ++ + + +V+L+R   
Sbjct: 244 GSILGAIVTGYMLGLAEGLTKVF--------------YPEASNLVVFVIMAIVLLVRPAG 289

Query: 339 LLR 341
           L  
Sbjct: 290 LFG 292


>gi|239905545|ref|YP_002952284.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
 gi|239795409|dbj|BAH74398.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
          Length = 295

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 99/306 (32%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +   IY + A G  I+  +  +++        +GAY    L  +  L       +
Sbjct: 8   LVSGLVIGSIYSLVALGFVIIYKATKVVNFAQGELVMVGAYICFSLTVQAKLPFLAAFFL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   S   G+ +    L+       I+ ++++    ++L     +  G         L  
Sbjct: 68  TLAFSFILGIAIERLILRPMIGEPIISVIMVTIGLSSVLKSLVQLFWGTQIQVFPPVLPQ 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +  L     + ++F +  I                  + + + +  A R    +Q+
Sbjct: 128 EPVMIAGLPVAPVYLAAFALSIILF-----------LIFSAFFKYSRLGIAMRATAFDQQ 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   I      ++ +++    + G            +       + V   VILGG+
Sbjct: 177 AAASMGIGIKNIFALSWCIAAMVSSIGGIILGNIN---GINAQLGHLGLKVFPAVILGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL   A    ++  +  +C G    +                    I L L+++++ + 
Sbjct: 234 DSLLGAALGGLVIGVLENVCDGAAKEFLG--------LGGFKDVAAFIFLVLILMIKPYG 285

Query: 339 LLRLRT 344
           L   R 
Sbjct: 286 LFGARE 291


>gi|299133576|ref|ZP_07026770.1| inner-membrane translocator [Afipia sp. 1NLS2]
 gi|298591412|gb|EFI51613.1| inner-membrane translocator [Afipia sp. 1NLS2]
          Length = 287

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 96/303 (31%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A GL++V G L +++L       +GAY    L +  G+  +L +P+
Sbjct: 8   LINGVLLGGLYAVMALGLALVWGVLNIVNLAHGAFIMLGAYLSWHLYTYLGIDPFLGLPI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A++  A G  M    L          TL+++   + +L     +        +      
Sbjct: 68  TAVVMFAVGYAMQRGLLNLVVKAPMFNTLLITFGLEVVLTYLAQLAFSADFRTINP---- 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V+  +           L+ ++ L+L  T +  A R    N  
Sbjct: 124 -------SYAGNSIQIGTVVLPLARLLAFGIAIVLTLAMWLFLLHTRLGRAIRATAQNLV 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A               F +     G AG  +              +      +I I+GG+
Sbjct: 177 AARLYGVEPRHLYAMTFGIGIGLAGAAGGLYGTVSQI--NPYIGATLTAKSFAIAIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +   +      L  +  L        F  +  F               L LV+++R   
Sbjct: 235 DNPLGVIVGGLFLGIIESLAVLYIGATFADVASFG-------------VLVLVLIVRPSG 281

Query: 339 LLR 341
           LL 
Sbjct: 282 LLG 284


>gi|301321475|gb|ADK70118.1| amino acid or sugar ABC transport system, permease protein
           [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale]
          Length = 855

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/341 (10%), Positives = 86/341 (25%), Gaps = 27/341 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGAT----------KSQKYIDSMGIQILIYVMFAWGLSIVV 60
           +  I+    V    L FL +               + +       + +Y++    ++I  
Sbjct: 33  FFSIIVGFIVSGIFLSFLNINPFTYFALLFGINFDKNFYQISLNWMAVYIVAGLSMAIAF 92

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
              G+ ++              I+           I    +I      I+    + F   
Sbjct: 93  K-AGVFNIGASGQILTATSIATIIFFSISGKDASSISPFMIILMLITCIISAAFIAFIAG 151

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
            L  A   + E+   IL+ W      K             +     I   +         
Sbjct: 152 IL-KALFNIHEVVSTILLNWSVFYIFKWFFGKYKDFSSGLSYTSKNIPSDQLSIGSNTVI 210

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           I +   L+        I +   +T +    + +  +      +   +    +++  +S A
Sbjct: 211 IPLLIALV----CVIIIWILFSKTVLGFKLKAVGSSVTGSKYIGINVKKQIITSLTLSGA 266

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA---KATAILIGVVEL 297
             G+AG     +    +         +   +I +     SL            +  +  +
Sbjct: 267 VAGIAGFLSMFTVSPNNFFASNSLPTLGFDAIAV-----SLV-AFNNPIGIIAIGWLWAI 320

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF--LVILMRS 336
                    +          +    L+       + I  + 
Sbjct: 321 LKTGGGPISSLYSISTQISGLISGILIYFTAIVSVFITFKP 361


>gi|271968738|ref|YP_003342934.1| branched chain amino acid ABC transporter permease/ATP-binding
           protein [Streptosporangium roseum DSM 43021]
 gi|270511913|gb|ACZ90191.1| branched chain amino acid ABC transporter, permease/ATP-binding
           protein [Streptosporangium roseum DSM 43021]
          Length = 580

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 103/298 (34%), Gaps = 21/298 (7%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
             +L           Y   + I  ++  +      ++VG  G++SL  +   AIGA+  +
Sbjct: 15  AAVLACVAVPALFSSYWTYLAITAVVGAVIMQSYGVIVGRAGVMSLCQMSFAAIGAWVVL 74

Query: 83  -ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +  +       L + +  + +   G+ +GLP+L+ RG  LA+ T   +     +L   +
Sbjct: 75  RLNLADAPGGFLLWLVLGGLAAVPVGVAIGLPALRIRGVNLAVVTFGFAVSTDIVLNANQ 134

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
                                  +                  + + + +  L A  +   
Sbjct: 135 --------------------FPGTTELKTLTRPGLFSGNAAYFVLTVIVFTLLALGLALF 174

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            RT +  +W  +R +++A  +   ++  +KL+AFA+S+   G+ G   A     +    F
Sbjct: 175 NRTRLGMSWLELRYSERAAAAHGISVARSKLAAFAISAFIAGVGGGLMAGQLGLVVSSNF 234

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
              +++ + ++ IL G  +             +  +   +        + F       
Sbjct: 235 AMGQSLALFAVAILIGPHNPEGAVMGGVFGAVMATILEKLRLPQDLGGMLFGLFAVFA 292


>gi|163757948|ref|ZP_02165037.1| putative permease component of ABC transporter [Hoeflea
           phototrophica DFL-43]
 gi|162285450|gb|EDQ35732.1| putative permease component of ABC transporter [Hoeflea
           phototrophica DFL-43]
          Length = 287

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 93/304 (30%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I    +   +Y +FA GLS+V G + L++L       +GAY  ++L +  GLS ++   V
Sbjct: 7   IIQGILLGGLYALFAAGLSLVFGIMRLVNLAHGDLIVLGAYLILLLVTLTGLSPFVAAAV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +     A G  +    L        +  L+++     +L              +      
Sbjct: 67  AMPFMFALGYGLQKFMLNRVLGDDILPPLLVTFGLSVVLQNALLEGFSADSQRIQSGPLS 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                           + +   +           +   +     RT++  A+R   D+  
Sbjct: 127 TA----------SIEVAGLNLGVMPLLTFASALAVIIGLNQLFYRTSLGRAFRATSDDPT 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +          A  ++   + +A  +     +         +  I     VI+GG+
Sbjct: 177 TASLMGIKPAGIFAKATGIAMIIVTIAALYLGMRSNF--DPSIGPARLIYAFEAVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        I+     +   +N  +                    +A  +V+L+R   
Sbjct: 235 GSLWGTLAGGVIIGVAQTVGAAINPEW--------------QILAGHMAFLIVLLVRPRG 280

Query: 339 LLRL 342
           L   
Sbjct: 281 LFPR 284


>gi|283852730|ref|ZP_06369995.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
 gi|283571908|gb|EFC19903.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
          Length = 307

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 51/301 (16%), Positives = 100/301 (33%), Gaps = 17/301 (5%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI---WLLIPVSAMISGA 105
           Y + A G  +V G L L++      + +GAY    + + +         L     +    
Sbjct: 19  YSLIALGYCLVYGVLLLINFAHGDIFMVGAYIAFFVCAFFLGKFGAIPGLPGWLVLTLAV 78

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
              ++   ++    + +A   L    + +  ++    +            L     +  +
Sbjct: 79  PLTMILTAAVGVTLERIAYRPLRRKGVNRLYVVITALMCGLILENGNLALLGASRKSFPT 138

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
           LI    F  + V +      V+         +   + RT I  A R I  +  A   +  
Sbjct: 139 LIPTKVFEVAGVSFTNIKLMVIGVAILSFLLLHFIVTRTKIGMAMRAISYDHFAVPLMGI 198

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
            +    +  F + S F G+AG FFA +   I P M         I+ V+ GG+ S++   
Sbjct: 199 PVDTVIVFTFVLGSGFAGLAGLFFAMTYPVIDPYMGALIGWKAFIAAVV-GGIGSIAGAF 257

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
               +L  V  +        +  L+ F               L L++ +R   L  +   
Sbjct: 258 AGGFLLGFVEIMVVAFFPSTYRDLIAFS-------------ILLLILSIRPTGLFGVARR 304

Query: 346 S 346
           +
Sbjct: 305 T 305


>gi|257486112|ref|ZP_05640153.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|331010451|gb|EGH90507.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 380

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 82/332 (24%), Gaps = 40/332 (12%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------------ 84
            +   +  + L     A G+ ++ G  G+LSL   I + +G+Y   +             
Sbjct: 52  DFRLGLAGKYLSLAFCAVGMVMIWGYGGILSLGQGIFFGLGSYMMAMYLKLEATATDEAA 111

Query: 85  ----GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                         +I  S              +       +  A L     +     + 
Sbjct: 112 SALAAFYGSALPDFMIWNSVEALPWWWKPFESATFTLAAILILPALLAFLFSYAYFKKRV 171

Query: 141 KPITNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             +                I            +      F            +Y +   +
Sbjct: 172 GGVYFSIITLSLASIMSIMIIGQQGYTGGVNGLTDFKTAFGMSLQAPQTPWILYLITTLL 231

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              S ++  ++ R+ +      IRD +             K   FAV++    + G  F 
Sbjct: 232 LLASVAMCGFILRSRLGKVVVAIRDREDRVRFSGYNTALFKAFIFAVAALISALGGVMFT 291

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                 SP +     +  ++    LGG  SL      T ++                   
Sbjct: 292 LQVGLASPSLVGIIPSTEIVIYAALGGRLSLVGAVYGTLLIGAAKTYLSE---------- 341

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +F       +      V+L     L  L
Sbjct: 342 ----NFVSFWQYFIGFLFMAVVLFLPTGLAGL 369


>gi|89899030|ref|YP_521501.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89343767|gb|ABD67970.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 293

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 99/301 (32%), Gaps = 21/301 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL+++ G +G+++L     Y IGAY    L    G +       +
Sbjct: 11  LNALQYGLLLFLVASGLTLIFGIMGVINLAHGSFYMIGAYMAYALAPIVGGTFSGGFFAT 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             +     +++G             + L   +  Q +L+ +  I   +    +       
Sbjct: 71  LAVGLVLAVLLGYVLEW-----AFFSFLYERDHLQQVLMTYGLILVFEELRSLLVGDDVH 125

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G      +         + Y ++  ++      L+ ++     RT +    R    N++ 
Sbjct: 126 GVQAPDFLAGTLPLGELMTYPVYRLFISGVCLVLALAMYFVFTRTRLGMMIRAGSANREM 185

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             SL   I F     FA   A    AG   A             +  II   +V++GG+ 
Sbjct: 186 VQSLGIDIKFLYRVVFAAGVAIAVFAGMIAAPVSSV--YPGMGNTVLIICFVVVVIGGIG 243

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  ++  V      +                     L+ + + L++L++   L
Sbjct: 244 SIRGALLAALLIGVVDTFGKVL--------------LPQASGVLVYVLMALILLVKPDGL 289

Query: 340 L 340
            
Sbjct: 290 F 290


>gi|264677281|ref|YP_003277187.1| inner-membrane translocator [Comamonas testosteroni CNB-2]
 gi|262207793|gb|ACY31891.1| inner-membrane translocator [Comamonas testosteroni CNB-2]
          Length = 316

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 67/337 (19%), Positives = 128/337 (37%), Gaps = 39/337 (11%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +  N   +IL        LL    L    + +Y  S+ I IL+Y + A   ++  G    
Sbjct: 1   MNPNHRKEILIWAVSAAALLGLALLPRWLTDEYYLSLMISILMYCVLATAWALFSGPTRY 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           +SL  V  + +GAY   + G     +  L I  +A +     +I+GL +L+  G Y  I 
Sbjct: 61  ISLATVAFFGMGAYVTAVFGESLPWAAVLGI--AAGVGLIMALIVGLSTLRLSGVYFVIF 118

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           +  ++E+ + ++  W+                       ++ +         I ++ +Y+
Sbjct: 119 SFGLAELVKQLVTWWEV----------------------NITKDLGRYVFVEITQLDIYW 156

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            LL M  L  ++   + R+ +  A R I +++     +      AKL  FAVS+ FI + 
Sbjct: 157 QLLAMLALVLALRALINRSRLGLALRVIGEDETVATHVGINTTTAKLLLFAVSAVFITVT 216

Query: 246 GAFFAASRDRISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           GA  A     I P   F  + +   + + +LGG  +L         L+ + E        
Sbjct: 217 GAIMAPRWTYIDPSIAFAPAVSFQTLIMALLGGAGALFGPILGAVPLVLLFEYLAA---- 272

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     +F    + L+ +   +++      L  
Sbjct: 273 ----------NFPNHFSILLGLVFIVIVYFIPQGLSG 299


>gi|113867532|ref|YP_726021.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113526308|emb|CAJ92653.1| ABC-type transporter, permease component: HAAT family [Ralstonia
           eutropha H16]
          Length = 315

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 113/320 (35%), Gaps = 27/320 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M + GL+++   +G+L+      Y +GAY    + S   +  W  +  
Sbjct: 8   LLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYTIAS--KVGFWPALIF 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G ++    L+    Y  +A L+ +     ++ +   +  G         L  
Sbjct: 66  APLLVAGAGALVERFGLRTVHKYGHVAELLFTFGLAYLMEEGVKLVWG---------LAA 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + + +    F      +  +  +++L    +  +I L L RT I    +    + +
Sbjct: 117 VPYRIPAELDGPLFTVFTSSFPKYRAFMMLVSLGMLVAIYLVLTRTRIGLVIQAALTHPE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    +  F   +A  G+AG         ++      +   IV  + ++GGM
Sbjct: 177 MVEALGHNVPRVFMMVFGGGAALAGLAGVIGG--NAFVTEPSMAAAVGSIVFVVAVVGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR--------------HTTLM 324
            SL     A+ ++  +      ++      +     + +                   L 
Sbjct: 235 GSLVGAFIASILIGVLQTFAVTIDASLAGLMTSLGLAVSEATPFYSLWKLTVAQVAPVLP 294

Query: 325 VIALFLVILMRSHSLLRLRT 344
            + L ++++ R   L+  R 
Sbjct: 295 YLLLVVMLIFRPRGLMGTRE 314


>gi|311106563|ref|YP_003979416.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310761252|gb|ADP16701.1| inner-membrane translocator 40 [Achromobacter xylosoxidans A8]
          Length = 283

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 97/304 (31%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     LIY   A GL+++ G   +++        +G Y+   L +   +   L  P+
Sbjct: 5   LSAGLFNGLIYAAVAVGLALIWGITDVINFAHGEFLMLGMYAAYWLYTLGHIDPTLSAPL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A++    G +     ++      A+A ++ +     +L +   I               
Sbjct: 65  VAIVLAFVGFLTYALIIRRLQKGPAMAVILATFGLGLVLRQVAFIAFSPD---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              ++   +       + +          L    +  ++ + + RT   +A + + ++++
Sbjct: 115 -YRSLPDTLVSGSVTVAGISLGRPQVVTGLIALVVVVALFILVYRTRWGHALQAVAEDRQ 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +  +        + + SA +G+AGA                   ++    V +GG 
Sbjct: 174 VAALVGISPDRVNAQVWMLGSAAVGLAGALLTTFFYV--FPSVGTVFGLLAFVAVCMGGF 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL     A  ++  +  +          ++  F             I   LV+  R   
Sbjct: 232 GSLPGAFIAGILIGIIEAMTGYFVAPALKTVSVF-------------ILFILVLWYRPRG 278

Query: 339 LLRL 342
           L   
Sbjct: 279 LFGR 282


>gi|320352224|ref|YP_004193563.1| HAAT family amino acid/amide ABC transporter membrane protein 1
           [Desulfobulbus propionicus DSM 2032]
 gi|320120726|gb|ADW16272.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Desulfobulbus propionicus DSM 2032]
          Length = 296

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/315 (12%), Positives = 87/315 (27%), Gaps = 26/315 (8%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +      +Y+ +      IY + A G +I+  + G+++        +G            
Sbjct: 1   MSPDLFFQYLFAGITYGSIYAIVAIGFNIIYNTTGIINFAQGEFVMLGGMIS-------- 52

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
                L+P   +       ++    +    + L I  L    + + I+I        +  
Sbjct: 53  ---ISLLPFMPLGYAIAAAVVITMLIGAVIEMLFIRWLESPSVLRMIIITIGISILLRES 109

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                                 F    V     + +V++    +   + L+ + T +   
Sbjct: 110 ALHIWGESIRSLPYFYGNEVTTFSLGSVHVSPQVVWVIVACSVMMGGLSLFFKSTPVGRE 169

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R    N+ A              +F +S+    +AG   +      +      S  I  
Sbjct: 170 MRACSANRTAALLCGINTRNMVTLSFMLSAGIGALAGCVMSPITY--TQYDSGTSLAIKG 227

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            ++ ILGG+ +      A  +L  +      +    F   +       +           
Sbjct: 228 FTVAILGGLGNSMAAVAAGILLGIIEAFSVSVVPLAFQDAISITILLIIL---------- 277

Query: 330 LVILMRSHSLLRLRT 344
               ++ H L     
Sbjct: 278 ---FVKPHGLFGSSE 289


>gi|328951649|ref|YP_004368984.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451973|gb|AEB12874.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
          Length = 300

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 48/333 (14%), Positives = 93/333 (27%), Gaps = 36/333 (10%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            + AV    +L   L     + ++        I    A    + +   G LSL     + 
Sbjct: 3   LVAAVFALAVLLPVLPLGGWRAFMLDAAQFAFIVTALALSWDL-MARTGQLSLAHGAFFG 61

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY+              L       + +   +  L        +              
Sbjct: 62  VGAYATAFALHHGLPVPAALALGGMAAAASGVALGALTLRLLGIYFAIATLAFSEIARTL 121

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L     +  G  G  V                      +F    +  Y++ +G+  L+ 
Sbjct: 122 VLKAPVTLLGGPWGYPVPP--------------------AFEGAPLGSYFLAVGVLALAV 161

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + L + R     A    R  +     L   ++  KL   A SS   G+AG  +      
Sbjct: 162 GVSLIMERGRWRYATSATRQGEAVARVLGVPVVRVKLGVLAASSCVAGIAGGVYGLKTLF 221

Query: 256 IS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           ++  D F  +  +  + I I GG+ + +       +L  +                    
Sbjct: 222 LTPYDAFGLARAVEALVIPIFGGLYTTAGPLVGGLVLSALENALR--------------L 267

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                +  +    L L +L     ++RL     
Sbjct: 268 GVGEGYLVVYGAILVLAVLFLPGGIVRLWRRRA 300


>gi|327190381|gb|EGE57478.1| fructose ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 354

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 92/311 (29%), Gaps = 19/311 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +   +      G   S   +  +  QI I  +     ++V+ + G + L+  +  
Sbjct: 45  LIVLVLAIIIFGIALGGRFFSSYTLTLILQQIAIVGVLGAAQTLVILTAG-IDLSIGVIM 103

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I A     +   YG+   + +    ++ G CG++ G      +                
Sbjct: 104 VISAVIMGNVAITYGIPTPVAVIAGLLVGGLCGLLNGFLVAFMKLPPFI----------- 152

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    I      IY A+                 F +SF +    +   ++ M  L 
Sbjct: 153 -VTLGTWNIVMATNFIYSANETIRDADVDAQAPLLHLFAASFRLGTAVLTLGVIAMVLLV 211

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L  TA       + D+ +A            L+ + +S      A         
Sbjct: 212 LLLWYVLNHTAWGRHVYAVGDDPEAAKLSGIQTKRVLLTVYTLSGVIAAFAAWVSIGRNG 271

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            ISP       N+  I+  ++GG+       S+        I+  V      +       
Sbjct: 272 SISPSSAVTDYNLQAITATVIGGISLFGGRGSILGTLFGAMIVGVVSMGLNMLGADPQWK 331

Query: 309 LLKFDCSFNMR 319
           +L         
Sbjct: 332 VLLTGVLIIAA 342


>gi|291615558|ref|YP_003518300.1| RbsC [Pantoea ananatis LMG 20103]
 gi|291150588|gb|ADD75172.1| RbsC [Pantoea ananatis LMG 20103]
 gi|327395827|dbj|BAK13249.1| ribose transport system permease protein RbsC [Pantoea ananatis
           AJ13355]
          Length = 323

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 93/312 (29%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 24  LIALIVLIAVVASQSPNFFTVANLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L      +   +    A+ +    +   + +      ++A   +++      
Sbjct: 83  LTGAVAASLVGMEVNAFVAVAASLALGAAIGAVTGTIVARGKVQAFIATLVMML------ 136

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G   +Y        G    + +  +      +     ++ ++L       
Sbjct: 137 -------LLRGVTMVYTNGSPVNTGFNDNADLFGWFGIGRPLGIPTPVWLMVLVF----V 185

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T +      +  N+ A       +   K+  +++S     +AG+   A    
Sbjct: 186 AAWYMLHHTRLGRYIYALGGNEAATRLSGINVNRVKVIVYSLSGMLAALAGSIEVARLSS 245

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      M    +  ++
Sbjct: 246 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLMGVSSYYQMI 305

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 306 VKAVVILLAVLV 317


>gi|239945413|ref|ZP_04697350.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces roseosporus NRRL 15998]
 gi|239991875|ref|ZP_04712539.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces roseosporus NRRL 11379]
 gi|291448869|ref|ZP_06588259.1| branched-chain amino acid ABC transporter permease protein
           [Streptomyces roseosporus NRRL 15998]
 gi|291351816|gb|EFE78720.1| branched-chain amino acid ABC transporter permease protein
           [Streptomyces roseosporus NRRL 15998]
          Length = 296

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 76/306 (24%), Gaps = 21/306 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G  ++  +  +++         G Y   +      +  W  + V
Sbjct: 8   LLGGLSIGSVYALIALGFVVIFKATEVVNFAHASLLLAGGYVTAV--LHDDIGFWPALLV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +   G  +    ++           I++     +LI       G            
Sbjct: 66  GIAGAATVGAAIEFFVMRRYRGSDHSVLAIVTIGVDILLITELTRRMGTD---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +             V          L    L    +L  R T+   + R   +N +
Sbjct: 116 -VLALGDPWGNEVVNIGGVTLAQTRIAAFLAAGLLITVFLLAFRYTSWGVSMRAAAENPQ 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L+A    +  +    A F         +       +      ILGG+
Sbjct: 175 TAALMGIKLGRVSLAA-WAVAGALAAVAALFLTVFPTPGLERATSLAALKAFPAAILGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +       I+     L  G                         + +  V+L+R   
Sbjct: 234 DSTTGALAGGLIVGVTESLATGYQSDLSFLGRGIGDLAP-------YLVMVAVLLIRPAG 286

Query: 339 LLRLRT 344
           L   + 
Sbjct: 287 LFGTKE 292


>gi|146308850|ref|YP_001189315.1| inner-membrane translocator [Pseudomonas mendocina ymp]
 gi|145577051|gb|ABP86583.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Pseudomonas mendocina ymp]
          Length = 289

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 91/303 (30%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I S      +Y + A G  I       ++     A  IGA     L    GL  WL   +
Sbjct: 6   IISGLGLGSMYALLALGFHITYVVSRTVNFAQGSAMMIGAVLGYSLCVTAGLPWWLAAVL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S  +    G+ + L  ++      + A L+ +     ++      + G            
Sbjct: 66  SLALCALYGLAIELFLVRPFHSRGSEAWLMATVAGGILVDNLVLFSFG-----------K 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +            +     + L    ++ ++ L  R T +         N +
Sbjct: 115 EPRQFDVALLHQHLQVLGSNVQALQLLIPLAGAGIALALYLVRRYTRLGKVLEACVQNPR 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +      AFAVS+ F G+AG   A   +            +   ++ ILGG+
Sbjct: 175 AAQLMGIRVNRVVACAFAVSTVFAGIAGLLIAPLYNV--HADMGTLFGLKAFAVAILGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S + +  A  +      L        F  +  F               + + + +R + 
Sbjct: 233 ASANGVFLAGLLFGLAEALITLQFGSAFTQIFTFG-------------LVIIALALRPNG 279

Query: 339 LLR 341
           L  
Sbjct: 280 LFG 282


>gi|328957755|ref|YP_004375141.1| ribose ABC transporter [Carnobacterium sp. 17-4]
 gi|328674079|gb|AEB30125.1| ribose ABC transporter [Carnobacterium sp. 17-4]
          Length = 323

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 85/297 (28%), Gaps = 25/297 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            +  +   + ++  Q+    + A+G++ V+   G + L+     A+ +          G+
Sbjct: 41  PSFIAPTNLLNLLRQVSTNALIAFGMTFVI-ITGGIDLSVGSTLALSSALMA-GTIAAGM 98

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              L + +S ++    G + GL   K +          M+      L+          G 
Sbjct: 99  DPILAMILSLVVGTVFGAVNGLLITKGKMAPFIATLATMTIYRGLTLVYTDGNPITGIGD 158

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                                F      Y   + + ++ M      + + L +       
Sbjct: 159 SFI------------------FKFVGRGYFFGIPFPVVLMIISFILLYILLHKMTFGRKT 200

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N+KA F         K   +A+S     +AG    +  D   P      E   + 
Sbjct: 201 FAIGGNEKASFIAGIKNDRIKTGIYALSGLMAALAGIIITSRLDSAQPTAGTSYEMDAIA 260

Query: 271 SIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           S+V     + GG   L        I+  +      +    F   +       +    
Sbjct: 261 SVVLGGTSLSGGRGRLVGTLIGALIIGTLNNGMNLLGISSFYQQVVKGIVIIIAVLL 317


>gi|113867552|ref|YP_726041.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
 gi|113526328|emb|CAJ92673.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
          Length = 321

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 59/337 (17%), Positives = 126/337 (37%), Gaps = 29/337 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +N+   +  L  +   L  F       S  +  ++ + +L+  + A   +I+ G  G  S
Sbjct: 1   MNRISSLPTLGWIAIVLAGFAAAPLWLSSGFALNLLVMVLLMTLMAQSWNILGGFGGQFS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIA 125
                 +  GAY+  IL   +G++ WL + ++  +    G+ +G+ S +   +G Y ++A
Sbjct: 61  FGHAAFFGTGAYAMAILQVAFGMNAWLALVLATGVGALAGVGVGVLSFRYGLKGSYFSLA 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL ++E+ + +       T   AG+ +  +   L                    +    +
Sbjct: 121 TLAVAEVLRIVA-NAVGFTGAGAGMQLPLQPGALHLQFAG--------------KAGYLW 165

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            +L        +  WLRR+        +RD++ A  +L   ++  KL A A+S+A +  A
Sbjct: 166 FILTFVAAGLLLSWWLRRSRFGACLMAVRDSEDAAKALGIDVLRVKLVAIAMSAALMAAA 225

Query: 246 GAFFAASRDRISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           G F+      + P   +  + ++  +   ++GG  ++         L  + EL       
Sbjct: 226 GVFYTQYLQYLDPHIAYGPAFSVAALVGAVIGGTATVFGPLLGALALQLLNELTRNALG- 284

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                             +    L L+++     L  
Sbjct: 285 ----------DVPGVSLVIYGALLVLMVMFLPQGLAG 311


>gi|260574884|ref|ZP_05842886.1| Monosaccharide-transporting ATPase [Rhodobacter sp. SW2]
 gi|259022889|gb|EEW26183.1| Monosaccharide-transporting ATPase [Rhodobacter sp. SW2]
          Length = 331

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/314 (12%), Positives = 94/314 (29%), Gaps = 20/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  V+  ++L        + + + ++  Q  I  + A G++ V+     + L+     
Sbjct: 24  ILVALVLVCVILAFANEYFLTTRNLVNVLRQTSINGILAIGMTFVI-LTRGIDLSVGSVV 82

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+         +    ++    P  A+ + A G+++G+      G  +A   +       
Sbjct: 83  ALAGVVSASFATTATTAMVPGGPYPAVFALAIGVLVGVVCGLINGVIVAFFRVPSFVATL 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +L   + +T   AG      L      + +               + +   ++    + 
Sbjct: 143 GMLSAARGLTLLYAGGKPVPALTDSFRYIGTE------------SILGVPMPVVLFALVF 190

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            + +  L  T           N  A       +   +L  + +S    G AG   AA   
Sbjct: 191 FASLWVLTSTRFGRHVYAAGGNPHAARVSGVNVNRVRLLVYVISGGLAGAAGMILAARTG 250

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                    +  +  I+ V++      GG+  ++       ++  V      M    +  
Sbjct: 251 SA-LTQAGIAYELDAIAAVVIGGTSLSGGVGKVTGTLIGALLIAVVNNGLDLMGVESYYQ 309

Query: 309 LLKFDCSFNMRHTT 322
            +            
Sbjct: 310 QVIKGMLIVAAVML 323


>gi|298345657|ref|YP_003718344.1| ribose/xylose/arabinose/galactoside ABC transporter permease
           [Mobiluncus curtisii ATCC 43063]
 gi|304390654|ref|ZP_07372607.1| ribose/xylose/arabinose/galactoside ABC superfamily ATP binding
           cassette transporter permease [Mobiluncus curtisii
           subsp. curtisii ATCC 35241]
 gi|315657845|ref|ZP_07910725.1| ribose/xylose/arabinose/galactoside ABC superfamily ATP binding
           cassette transporter permease [Mobiluncus curtisii
           subsp. holmesii ATCC 35242]
 gi|298235718|gb|ADI66850.1| ribose/xylose/arabinose/galactoside ABC superfamily ATP binding
           cassette transporter permease protein [Mobiluncus
           curtisii ATCC 43063]
 gi|304326410|gb|EFL93655.1| ribose/xylose/arabinose/galactoside ABC superfamily ATP binding
           cassette transporter permease [Mobiluncus curtisii
           subsp. curtisii ATCC 35241]
 gi|315491642|gb|EFU81253.1| ribose/xylose/arabinose/galactoside ABC superfamily ATP binding
           cassette transporter permease [Mobiluncus curtisii
           subsp. holmesii ATCC 35242]
          Length = 358

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/314 (8%), Positives = 81/314 (25%), Gaps = 28/314 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + +   +++ +   A ++   ++ + +   + +  A G + V+   G + L+     
Sbjct: 12  VAGVVLAVGIIMGVISPAFRTLDNLEVLFLNGSVVLFLALGQTFVL-LTGGIDLSVGSNI 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      +         W    ++ ++    G+  G      +     +          
Sbjct: 71  ALTGVIAALTMQSGVP-WWAAALIALLVGVVVGLFNGAMVYWGKMPPFIVTFATFGISAS 129

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                   L       +    F          +   ++ +   +
Sbjct: 130 I--------------------PKILTDAKSVTVSDPMFAIFGRGSLFGIPIPVVMVLIAA 169

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L+LR +A       +  N          +    +  + +S       G   A+   
Sbjct: 170 VLCALFLRHSATGVHIYAVGGNPATSRLAGINVAKITVLVYVISGVTAACGGIITASRLM 229

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              P     +E    I+  ++      GG+ S+        ++  V      +    +  
Sbjct: 230 VGYPTAGSGTEQFYSIASAVVGGVSLFGGIGSIPGAFLGALLIAEVSNGMNVIGVSSYWQ 289

Query: 309 LLKFDCSFNMRHTT 322
            L       +    
Sbjct: 290 PLVIGVIILIGVLI 303


>gi|190890166|ref|YP_001976708.1| fructose ABC transporter permease [Rhizobium etli CIAT 652]
 gi|190695445|gb|ACE89530.1| fructose ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 354

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 92/314 (29%), Gaps = 19/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +   +      G   S   +  +  QI I  +     ++V+ + G + L+  +  
Sbjct: 45  LIVLVLAIIIFGIALGGRFFSSYTLTLILQQIAIVGVLGAAQTLVILTAG-IDLSIGVIM 103

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I A     +   YG+   + +    ++ G CG++ G      +                
Sbjct: 104 VISAVIMGNVAITYGIPTPVAVIAGLLVGGLCGLLNGFLVAFMKLPPF------------ 151

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    I      IY A+                 F +SF +    +   ++ M  L 
Sbjct: 152 IVTLGTWNIVMATNFIYSANETIRDADVDAQAPLLHLFAASFRLGTAVLTLGVIAMVLLV 211

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L  TA       + D+ +A            L+ + +S      A         
Sbjct: 212 LLLWYVLNHTAWGRHVYAVGDDPEAAKLSGIQTKKVLLTVYTISGVIAAFAAWVSIGRNG 271

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            ISP       N+  I+  ++GG+       S+        I+  V      +       
Sbjct: 272 SISPSSAVTDYNLQAITATVIGGISLFGGRGSILGTLFGAMIVGVVSMGLNMLGADPQWK 331

Query: 309 LLKFDCSFNMRHTT 322
           +L            
Sbjct: 332 VLLTGVLIIAAVAI 345


>gi|170289713|ref|YP_001736529.1| ABC-type branched-chain amino acid transport system, permease
           component [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170173793|gb|ACB06846.1| ABC-type branched-chain amino acid transport system, permease
           component [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 363

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 120/357 (33%), Gaps = 55/357 (15%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL-- 90
             +   + ++ +   I+++    L++  G  G+     V+A  +GA     +  R     
Sbjct: 7   LLTNPLLLNILVNFGIFLIVTLSLNLEAGIAGIPQFGRVLAVLVGAIGAGSIAGRLIAAY 66

Query: 91  -----------------------------------SIWLLIPVSAMISGACGMIMGLPSL 115
                                               + L + ++A + GA G +   P++
Sbjct: 67  YGLPSGDEYVTGSTNIRIVEELNQRLSSNPVDSILMLILSLMIAAFMGGAIGYLASYPAI 126

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
           + R  YL I  L   E  Q I   + PI+ G  GI V D               FRF  +
Sbjct: 127 RLREAYLGITLLTFGEAVQTIAKYYDPISGGTEGIMVPD--------------VFRFVGT 172

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                +F   V+L +  +    +  L R+    + + +RD + A       I+  +  A 
Sbjct: 173 GQARFLFSTAVILLIAIIIYLYLQLLIRSPFGRSLKAMRDMELAAKVYGKDIVKLRTQAL 232

Query: 236 AVSSAFIGMAGAFFAASRDRI-SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
            +  +   + GA +      + +    + + +    + ++LGG  +   I   T I   +
Sbjct: 233 IIGGSIAAIGGALWTLYTMSLKAYTYNRVTWSFWPWAFMMLGGAGNNMGILIGTFIFSTL 292

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             L   +  Y          + N     L+ + + L+ + R   +L  R+       
Sbjct: 293 RSL---IFAYKTALETIIPINPNWLEYILIGLIIVLIAMFRPQGMLPERSELPMRRE 346


>gi|241518275|ref|YP_002978903.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240862688|gb|ACS60352.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 287

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 91/304 (29%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I    +   +Y +FA GLS++ G + L++L       + A+  ++L +  GL+ ++   +
Sbjct: 7   ILQGVLLGGLYALFAAGLSLIFGIMRLVNLAHGDLIVLAAFLILVLVTTLGLNPFVAAAI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +  A G  +    L        +  L+++     ++                     
Sbjct: 67  AMPLMFAIGWGLQYFLLNRTLGKDILPPLLVTFGLSIVIQNGLLEGFSAD---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +         V   I           +   +   + RT++  A+R   D+  
Sbjct: 117 SRRVFAGSLESASVNLGPVTAGIMPLMTFFSAVAVIVCLNQLIYRTSVGRAFRATSDDPV 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +          A  ++   + +A  +     +         +  I     VI+GG+
Sbjct: 177 TAGLMGIRPQRIFAMATGLAMVVVTIAALYLGTRANF--DPTSGPARLIYAFEAVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL     +   +N  +                    +A   V+L +   
Sbjct: 235 GSLWGTLAGGIILGVAQTVGAAINPEW--------------QILAGHLAFLAVLLFKPRG 280

Query: 339 LLRL 342
           L   
Sbjct: 281 LFPR 284


>gi|171060322|ref|YP_001792671.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
 gi|170777767|gb|ACB35906.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
          Length = 293

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 51/301 (16%), Positives = 97/301 (32%), Gaps = 21/301 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL+++ G +G+++L     Y IGAY    L      +        
Sbjct: 11  LNALQYGLLLFLVASGLTLIFGIMGVINLAHGSFYMIGAYMAYALAPVVERTFGGGFFAV 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             I     +I G         +L        E  Q +L+ +  I   +    +       
Sbjct: 71  LAIGLVLAVIFGYVLEWAFFSFLYD-----REHLQQVLMTYGLILVFEELRSLLVGDDVH 125

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G    + +         + Y ++  ++      L+  +     RT +    R    N++ 
Sbjct: 126 GVQPPAFLSGTLPLGDMMTYPVYRLFISAVCLVLALGMYFVFTRTRLGMMIRAGSTNREM 185

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             SL   I F     FA   A   +AG   A             +  II   +V++GG+ 
Sbjct: 186 VQSLGIDIKFLYRVVFAAGVAIAVLAGMVAAPVSSV--YPGMGSTVLIICFVVVVIGGIG 243

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  ++  V      +              F      L+ + + L++L +   L
Sbjct: 244 SIRGALLAALLIGVVDTFGKVI--------------FPQAAGVLVYVLMALILLWKPDGL 289

Query: 340 L 340
            
Sbjct: 290 F 290


>gi|328950817|ref|YP_004368152.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451141|gb|AEB12042.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
          Length = 297

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 99/306 (32%), Gaps = 20/306 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +   IY + A G  ++  +  +++       A+GA++   L     +S+WL   +
Sbjct: 8   LVSGVVVGSIYALAALGFVLIYKASRVINFAHGQYIAVGAFTAYALAVFLNMSVWLAGLI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G +     LK       I+ ++++    +++           G+        
Sbjct: 68  ALLTTALLGFLTERVFLKPMVGQPIISVIMVTIGLASVI----------DGLVHLTPFGA 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +  + +         +         +            + +++ +  A R + D+Q 
Sbjct: 118 GNFSFPAFLPEGGIALGGISVSYPQLLAVGFTALFLLLFGWFFQKSTLGIAMRAVADDQM 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL  ++      A+A +      +G    A            +  + V   VILGG+
Sbjct: 178 AAMSLGVSVEKVFALAWAAAGLTAAASGLVVGA--ISGLNLSALTAIGLKVFPAVILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++       I+  +  L  G    +                    + L LV+  + + 
Sbjct: 236 DSIAGAVVGGIIIGVLENLAAGYLDPFVPG--------GGTRDVFPFVVLLLVLWFKPYG 287

Query: 339 LLRLRT 344
           L     
Sbjct: 288 LFGTEE 293


>gi|170078699|ref|YP_001735337.1| permease protein of branched-chain amino acid ABC transporter
           [Synechococcus sp. PCC 7002]
 gi|169886368|gb|ACB00082.1| permease protein of branched-chain amino acid ABC transporter
           [Synechococcus sp. PCC 7002]
          Length = 298

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 90/263 (34%), Gaps = 13/263 (4%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           + +  L+  +    + + +   G LSL     YA+G Y   IL ++         P+  +
Sbjct: 11  LIVSTLLGALLGISVYLPL-MAGQLSLATPGFYALGGYIAAILSTQAIAFTGTTFPLPWL 69

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           +                   LA   + +      + ++   +      +    R+  L  
Sbjct: 70  LGEMALAG------------LASGMVALIIGVPVLRLRGIYLAIATIALVEIVRVLSLNL 117

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            +                 +   +++  +  +   ++  L  T +  A+  IR+++ A  
Sbjct: 118 PITGGAVGIFGIPQPFRSPLGYLWLVGPLLIIVGVLVWRLENTKVGRAFNAIREDELAAS 177

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           ++       K+ AF + +   G+ GA  A   +  +     F  +I  ++ V++GG  + 
Sbjct: 178 AMGINPTQYKVLAFVLGAILAGIVGAIAAHFLNTWNARQGTFDASITYLAFVLVGGSRTF 237

Query: 282 SKIAKATAILIGVVELCCGMNFY 304
                   +L  + E+  G+   
Sbjct: 238 LGPILGGIVLTALPEILRGLGDA 260


>gi|332798647|ref|YP_004460146.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp.
           Re1]
 gi|332696382|gb|AEE90839.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter
           sp. Re1]
          Length = 334

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 90/312 (28%), Gaps = 27/312 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
              +V  + L +        K + ++  Q  I  + A G+ + + + G + L+     A+
Sbjct: 33  AGLIVLFIFLSIATPHFFEVKNLMNIARQSAINSLVAVGMLMAILTAG-IDLSVGSILAL 91

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                 IL  +  +S  + I     +    G+I GL   K    +  I+TL M  I + +
Sbjct: 92  STVVMGILVVKLNMSPIIGILACLAMGSLLGIINGLLLTKLHLPHPFISTLGMQNICRGL 151

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            +                                        +   +    + +  +   
Sbjct: 152 ALIATK-------------------ASPISGFPPIIQYLGSAFLGPVPVSFILVIVIYVV 192

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
             ++L RTA       +  N++A       +    ++ + +S     M G       +  
Sbjct: 193 FHIFLTRTATGRHIYAVGGNKEAARLSGINVDAILITVYTLSGLMAAMGGLILTGRVNAA 252

Query: 257 SPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            P     +     I+ VI+      GG+ ++        I+  +      +        +
Sbjct: 253 YPLA-GLAYETDAIAAVIIGGASFMGGVGTVWGTLIGAMIMAVLRNGLNLLGVSAEWQTV 311

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 312 AIGAVIIGAVYV 323


>gi|126459441|ref|YP_001055719.1| inner-membrane translocator [Pyrobaculum calidifontis JCM 11548]
 gi|126249162|gb|ABO08253.1| inner-membrane translocator [Pyrobaculum calidifontis JCM 11548]
          Length = 373

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 53/360 (14%), Positives = 115/360 (31%), Gaps = 48/360 (13%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L V       +       Q Y+ +  + + IY+     +++  G  G+ +   V+  
Sbjct: 4   VVGLVVYLLGAALVAATGRNWQSYLLTTAVDLAIYLAITLTVNLEAGIAGIPNFGRVLTV 63

Query: 75  AIGAYSYV-------------------------------ILGSRYGLSIWLLIPVSAMIS 103
           A+GAY                                  +   +    + +   ++A + 
Sbjct: 64  ALGAYVAGGVVGRLAVLITGQSLDYVADNPAAVSALSRLLSPGQAAGLLAIAFLLAAALG 123

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
            A G +  LP+ +   DYLAI  L   ++   + + ++P+  G  G+             
Sbjct: 124 AAVGYLTSLPARRPSADYLAITLLAFGDVAYYVGLNYEPLVGGTLGVAAPPL-------- 175

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                + +         +    + L M  L  +++  +  +    A R  R++ +    L
Sbjct: 176 -----YEKLFGGGAARAVGAAAISLAMAMLIYALVEKIGNSPFGRALRVHREDPELLSVL 230

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK-FSENIIVISIVILGGMTSLS 282
                  +    AV  A   +AG  +A     + P  F+  +       I+ILGGM +  
Sbjct: 231 GRDPAELRGWTMAVGGALSAVAGVLYAYYVGAVHPRGFERVTFTFYPWLIMILGGMGNNL 290

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +A    I +    +   ++ Y +                L       +I+     ++  
Sbjct: 291 GVANGVLIFV---TIYRLLDVYKYEIGAVVGFDPVWLGYMLFGALALAIIIAAPRGIVPE 347


>gi|62182366|ref|YP_218783.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62129999|gb|AAX67702.1| ABC superfamily (membrane), D-ribose high-affinity transport
           protein (1st module, ATP-binding subunit) [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|322716860|gb|EFZ08431.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 330

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 89/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                     
Sbjct: 82  LTGAVAASIVGVEVNALVAVAAALALGAAIGAVTGVIVAKGRVQ--------AFIATLVM 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L+          G         + T        F +        +     ++ + F++A
Sbjct: 134 MLLLRGVTMVYTDG-------SPVNTGFTDNADLFGWFGIGRPLGVPTPVWIMAIVFIAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGISVSKVKIIVYSLCGLTASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|329900646|ref|ZP_08272538.1| ABC branched-chain amino acid family transporter, inner membrane
           subunit [Oxalobacteraceae bacterium IMCC9480]
 gi|327549422|gb|EGF33986.1| ABC branched-chain amino acid family transporter, inner membrane
           subunit [Oxalobacteraceae bacterium IMCC9480]
          Length = 294

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 109/303 (35%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +    Y M + GL+++ G L +++      Y +GA+S  I  + +GL+ W ++ V
Sbjct: 15  LLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMLGAFSAWIGLTYFGLNYWTMLIV 74

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ G  G+++    L++      +  L+++     ++        G +G         
Sbjct: 75  GPLVVGLFGIVIEKTMLRWLYKLDHLYGLLLTFGITLVVEGVLRSIYGVSGQSYPAPEAL 134

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G T             F+I   +  ++++    +  +    + +T +    R   +N K
Sbjct: 135 SGAT----------DLGFMILPNYRAWIVVASLAVCFATWFVIEKTRLGAYLRAGTENPK 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +    A    AG   A         +   +  I+V ++V++GGM
Sbjct: 185 LVEAFGINVPLMVTLTYGFGVALAAFAGVLAAPVIQV--SPLMGSNLIIVVFAVVVIGGM 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L  +  +                  +     T++ + + +V+++R   
Sbjct: 243 GSILGSILTGLSLGVIEGMTRVF--------------YPEASATVVFVIMAIVLMIRPAG 288

Query: 339 LLR 341
           L  
Sbjct: 289 LFG 291


>gi|315425581|dbj|BAJ47241.1| branched-chain amino acid ABC transporter permease [Candidatus
           Caldiarchaeum subterraneum]
          Length = 322

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 59/298 (19%), Positives = 113/298 (37%), Gaps = 16/298 (5%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           +K+ K    +     L+         +  Y   +  Q+  + +FA+  + + G    L L
Sbjct: 4   DKHVKTRLYVLAALILIYIALPLPFINTPYAVFILAQMTFFTIFAYSFNFLFGFTRQLFL 63

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI--AT 126
                  IGAY   I+           + +S ++    G+ + + S++ +   +     T
Sbjct: 64  CIGAFTGIGAYITGIILRDGIAGPVGAVALSTVVVAFIGLAVSILSVRRKLVAIFTGIFT 123

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L ++ +F N++     +T G+ G              R       F  +   Y  + Y  
Sbjct: 124 LAITLVFSNLVTGLVDLTGGETG-------------FRIRGVSLLFLDNLPYYMRYYYIA 170

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           L  +  ++      +  T    A+R I D++ +   +   +   K     ++SA +G +G
Sbjct: 171 LTTLLIVTVIAFYLIYYTRTGYAYRCIIDDELSAELVGINVQRVKTLTSLLASALLGFSG 230

Query: 247 AFFAASRDRISPDMFKFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           A +      ISP  + F   ++ V  IVILGG TSL      +AI+  V E    +  
Sbjct: 231 ALYGLFSQLISPSYYAFGSIDLPVQIIVILGGRTSLLGPYIGSAIIAVVNESLRFLGP 288


>gi|301628977|ref|XP_002943623.1| PREDICTED: ribose import ATP-binding protein RbsA-like [Xenopus
           (Silurana) tropicalis]
          Length = 651

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 94/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +    L         S +   ++  +I    + A G++ V+   G + L+     
Sbjct: 33  LLAVLLGMVGLFSALSEYFWSAETFITIANEIPALAVMAVGMTFVLIIAG-IDLSVGSVM 91

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A        ++G ++     ++      CG I G  S+ +R     ++  ++     
Sbjct: 92  ALCAAISAAAILQWGWAVPAAAALALATGLVCGTITGTISVAWRLPSFIVSLGMLEA--- 148

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                  ++ T  R+                 +    +    L 
Sbjct: 149 ------------------VRGSAYVVTDSRTQYVGDAISWLSAPLLGGISMAFVLATTLV 190

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT        I  N++A           ++  FAV+    G+AG   +A  +
Sbjct: 191 VLAQAVLSRTVFGRCVVGIGTNEEAMRLAGVDPRPIRIIVFAVTGLLAGLAGLMQSARLE 250

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+   A    I+  +      +     +  
Sbjct: 251 AADPNAGSGVELQVIAAVVIGGTSLMGGRGSVVTTAFGVLIIAVLEAGLAQVGASEPSKR 310

Query: 310 LKFDCSFNMRHTT 322
           +   C        
Sbjct: 311 IITGCVIVAAVIV 323


>gi|330819944|ref|YP_004348806.1| inner-membrane translocator [Burkholderia gladioli BSR3]
 gi|327371939|gb|AEA63294.1| inner-membrane translocator [Burkholderia gladioli BSR3]
          Length = 343

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 94/285 (32%), Gaps = 11/285 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+  +   +   A  S   + ++G+Q+          + V+   G + L+     A+  
Sbjct: 33  LVILVIAFSITSTAFFSVDNLMTVGLQVTSIAYLGVAATCVI-ITGGIDLSVGSVLALAG 91

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               +L          ++    ++ GA    +    +   G    IATL M  + + + +
Sbjct: 92  VCAALLAKTGVPVPLAML--GGVLVGALCGFINGICVTRMGLPPFIATLGMMLVARGMAL 149

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +                L        S +    FP +       + Y ++ M  L   + 
Sbjct: 150 QITGARPVSDLGDAFGALGNGALFRVSHLGPDGFPDT---TFPGIPYPVVIMVLLFVVVS 206

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L RT++      +  N +A       +   KL  + +S    G+ G    +      P
Sbjct: 207 VLLSRTSLGRHIYAVGSNAEAARLSGVNVQGVKLFTYVLSGVLAGVTGCVLMSRLVTGQP 266

Query: 259 DMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +     E   + S VI     +GG+ ++S  A    ++  +    
Sbjct: 267 NEGVMYELDAIASSVIGGTSLMGGVGTISGTAIGAFVIGVLRNGL 311


>gi|194289571|ref|YP_002005478.1| branched-chain amino acid ABC transporter [Cupriavidus taiwanensis
           LMG 19424]
 gi|193223406|emb|CAQ69411.1| putative ABC-type branched-chain amino acid transporter, membrane
           component [Cupriavidus taiwanensis LMG 19424]
          Length = 315

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 113/320 (35%), Gaps = 27/320 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M + GL+++   +G+L+      Y +GAY    + S   +  W  +  
Sbjct: 8   LLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYTIAS--KIGFWPALIF 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G ++    L+    Y  +A L+ +     ++ +   +  G         L  
Sbjct: 66  APLLVAGAGALVERFGLRTVHKYGHVAELLFTFGLAYLIEEGVKLVWG---------LAA 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + + +    F      +  +  +++L    +  +I L L RT I    +    + +
Sbjct: 117 VPYRIPAELDGPLFTVFTSSFPKYRAFMMLVSLGMLVAIYLVLTRTRIGLVIQAALTHPE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    +  F   +A  G+AG         ++      +   IV  + ++GGM
Sbjct: 177 MVEALGHNVPRVFMMVFGGGAALAGLAGVIGG--NAFVTEPSMAAAVGSIVFVVAVVGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN--------------MRHTTLM 324
            SL     A+ ++  +      ++      +     + +                   L 
Sbjct: 235 GSLVGAFIASILIGVLQTFAVTIDASLAGLMTSLGLAVSQTTPFYSLWKLTVAQVAPVLP 294

Query: 325 VIALFLVILMRSHSLLRLRT 344
            + L ++++ R   L+  R 
Sbjct: 295 YLLLVVMLIFRPRGLMGTRE 314


>gi|190893583|ref|YP_001980125.1| sugar ABC transporter permease [Rhizobium etli CIAT 652]
 gi|190698862|gb|ACE92947.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           CIAT 652]
          Length = 343

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 90/313 (28%), Gaps = 34/313 (10%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            +          + +    I ++ + + G + V+   G + L+     A+    +V   +
Sbjct: 20  AIINPRFLLPINLANTANLIGLFGILSIGQAYVI-ITGGIELSVGSLVALLGVLFVDFVA 78

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              +   L +P+  M+  A G I G    +       +    +              T G
Sbjct: 79  VQDMPWMLALPLILMLGAAIGAIHGWLITRLNLQPFVVTLCGLLIYRGAARFYTADGTAG 138

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                                 F             +    + +  +S ++ + L R+  
Sbjct: 139 ----------------FAFGQNFPELEFLTAGRLYGVPNTFIALVIISVAMWVVLHRSVF 182

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                 I  N++A            +SA+ +      +A  +FA     ISP        
Sbjct: 183 GRYLYAIGKNEEAARYSGIHTGRMVMSAYVICGLLTALAAIYFAMYTRSISPASHGQFYE 242

Query: 267 IIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           +  I+  +LGG        S+      T +L  +  L   +               ++  
Sbjct: 243 LYAIAAAVLGGFSLRGGEGSIVGAVLGTVLLQELQNLVNLL-----------GIPSSLNF 291

Query: 321 TTLMVIALFLVIL 333
             +  + L  V++
Sbjct: 292 AVMGGVILIGVLI 304


>gi|126737448|ref|ZP_01753183.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
 gi|126722033|gb|EBA18736.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
          Length = 288

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 100/305 (32%), Gaps = 29/305 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY--VILGSRYGLSIWLLI 96
           + S      +Y + A G  ++  +   ++        +GA+    +       L  W+  
Sbjct: 4   LVSGLANGCVYGLIALGFVLIYKATEAVNFAQGDFMMLGAFVALGLTNAQYLDLPFWIAA 63

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++  I    G ++ L  L+        A +I++     +L     +  G          
Sbjct: 64  PLTISIMAVFGYLLDLFVLRHLFGQSQTAVVILTIAMGFVLRFIAGLIWG---------- 113

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                T+ S +         V+  +    V++    L+ S+  + ++T +  A +    N
Sbjct: 114 -HEPQTLESPLALGDLQFGGVVLGMADVAVIVVTFLLTWSLYQFFQKTKLGLAMQAASQN 172

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           Q A + +   +   +   + +S A   +AG  FA+     + D       I   +  ++G
Sbjct: 173 QMAAYFMGIPVKRVQGLIWGLSGATAAVAGILFASK---GAIDPNAGLLGIKAFAAAVIG 229

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  SL        I+  +           ++ +                  L  V++ R 
Sbjct: 230 GFGSLPGALAGGLIVGVIEPFAARYFAAGYSQIAP-------------YALLLAVLVFRP 276

Query: 337 HSLLR 341
           H L  
Sbjct: 277 HGLFS 281


>gi|15603192|ref|NP_246265.1| RbsC [Pasteurella multocida subsp. multocida str. Pm70]
 gi|12721693|gb|AAK03411.1| RbsC [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 347

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/295 (11%), Positives = 87/295 (29%), Gaps = 8/295 (2%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             S   I ++ +Q+ I  + + G++ V+   G + L+     A+ A    +         
Sbjct: 36  FLSTNNIINILLQVSIICVISVGMTYVI-LTGGIDLSVGSIVALSAVCLGVFTHWGMD-- 92

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           WL    S+       +   + ++        +  L++        I    +     G+ +
Sbjct: 93  WLGENPSSFSVLMIVISAIIATIFVGILCGYVNGLVIVYGKVTPFITTLGMMGIARGLAL 152

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                         +RF       +     +   ++    +       L +T        
Sbjct: 153 TISDGKTIYNFPDTLRFLGNGRIALTETFALPVPVIIALLVVLVSFYVLTQTMFGRQIYA 212

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +  N++A       I   ++ A+ ++ A   +         +   P      E   + + 
Sbjct: 213 LGGNREAVRLSGINIEKLEIKAYVINGALAAIGAIILVGRLNAAQPIAGNGYELDAIAAT 272

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI     +GG+ S+   +    I+  +      +N   +   L       +    
Sbjct: 273 VIGGTSLMGGVGSVVSTSIGALIMGVLQNGLTLLNVTSYLQRLIIGLVIILAVFL 327


>gi|94986130|ref|YP_605494.1| inner-membrane translocator [Deinococcus geothermalis DSM 11300]
 gi|94556411|gb|ABF46325.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Deinococcus geothermalis DSM 11300]
          Length = 300

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 101/304 (33%), Gaps = 22/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    Y + + GL+++ G L +++      Y +GA++   LG  +GL  W  + +
Sbjct: 14  VFNGLVNGAFYALLSLGLAVIFGMLRIVNFMHGALYMLGAFAAFALGQAFGLGFWPSLIL 73

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  GM++    L           L+++     +               ++     
Sbjct: 74  APLLVGLLGMLLERTLLARLYGLDPSYNLLLTFGLTLLTQDLVK------QFMLSHYAVS 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                            FV++  +  +V++    +       + +T +    R   +N  
Sbjct: 128 SAPYTPPAALAGVVNLGFVVFPKYRLFVIVLSLVICLLTWFVIEKTRVGAIIRASTENPS 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       F V     G+AG   A                I   ++V++GG+
Sbjct: 188 VTRAFGIDVGKWVTGVFGVGVGLAGLAGVLAAPIYSV--EPYMGAELIITTFAVVVIGGL 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +  +  +   +     N+              L+ + + LV+L+R   
Sbjct: 246 GSILGSIVTGFAVGVLAAVGAAIYPPIANT--------------LVFLLMALVLLIRPSG 291

Query: 339 LLRL 342
           L  L
Sbjct: 292 LFGL 295


>gi|330989353|gb|EGH87456.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 380

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 82/332 (24%), Gaps = 40/332 (12%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------------ 84
            +   +  + L     A G+ ++ G  G+LSL   I + +G+Y   +             
Sbjct: 52  DFRLGLAGKYLSLAFCAVGMVMIWGYGGILSLGQGIFFGLGSYMMAMYLKLEATATDEAA 111

Query: 85  ----GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                         +I  S              +       +  A L     +     + 
Sbjct: 112 SALAAFYGSALPDFMIWNSVEALPWWWKPFESATFTLAAILILPALLAFLFSYAYFKKRV 171

Query: 141 KPITNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             +                I            +      F            +Y +   +
Sbjct: 172 GGVYFSIITLSLASIMSIMIIGQQGYTGGVNGLTDFKTAFGMSLQAPQTPWILYLITTLL 231

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              S ++  ++ R+ +      IRD +             K   FAV++    + G  F 
Sbjct: 232 LLASVAMCGFILRSRLGKVVVAIRDREDRVRFSGYNTALFKAFIFAVAALISALGGVMFT 291

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                 SP +     +  ++    LGG  SL      T ++                   
Sbjct: 292 LQVGLASPSLVGIIPSTEIVIYAALGGRLSLVGAVYGTLLIGAANTYLSE---------- 341

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +F       +      V+L     L  L
Sbjct: 342 ----NFVSFWQYFIGFLFMAVVLFLPTGLAGL 369


>gi|296535183|ref|ZP_06897404.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
 gi|296264491|gb|EFH10895.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
          Length = 295

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 109/315 (34%), Gaps = 25/315 (7%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           L          +    +    Y + + GL+++ G L +++      + +GA+   +L + 
Sbjct: 5   LLFQLELGLPQVVLGLVNGAFYALLSLGLAVIFGMLNVINFAHGAQFMMGAFVAWMLLNW 64

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
            G+  W  + +S +I GA G+++    +        +  L+++     I+        G 
Sbjct: 65  VGIGYWPALILSPLIVGAFGVLIEKTMISKLYKLDHLYGLLLTFGLALIIEGVFRNQFGS 124

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
           +G+  A      G  V            F+    +  +V++    +S +  L + +T + 
Sbjct: 125 SGLPYAPPEALGGPPVD---------LGFMFLPKYRLWVVVAALAMSLATWLVIEKTRLG 175

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
              R   +N     +    +       +A   A    AG   A             S  I
Sbjct: 176 AYLRAATENAPLVQAFGVNVPRMVTLTYAAGVALAAFAGVLAAPIYSV--NPQMGSSLII 233

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +V ++V++GGM S+         L  V  L                  +    +T++ + 
Sbjct: 234 VVFAVVVIGGMGSILGSVVTGFGLGLVEGLTKVF--------------YPEASSTVIFVI 279

Query: 328 LFLVILMRSHSLLRL 342
           + +V+L R   L   
Sbjct: 280 MAIVLLARPAGLFGR 294


>gi|168186429|ref|ZP_02621064.1| ABC transporter, carbohydrate uptake transporter-2 [Clostridium
           botulinum C str. Eklund]
 gi|169295547|gb|EDS77680.1| ABC transporter, carbohydrate uptake transporter-2 [Clostridium
           botulinum C str. Eklund]
          Length = 311

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 87/313 (27%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             L  +V  +++ +      +   I ++  Q+ +  + A G++ V+   G + L+     
Sbjct: 14  ALLGLLVLCIVMAILSPRFLTVPNIKNVLTQVSVNAIIAIGMTFVI-LTGGIDLSVGSTL 72

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AI       L       +  +I    +      +   + +                + F 
Sbjct: 73  AISGAVAATLIKANCSILVAIIVAIIVGIIVGLVNGVVIAK------------GKIQAFI 120

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L                  +  LG              +  I  I +  V+    FL 
Sbjct: 121 ATLATMTVFRGVTQVYTNGTPVSKLGEAF-------GKIGNTEIIGIPLPVVITIAVFLV 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +L   R         +  N+ +           K+  + +S     ++G    +   
Sbjct: 174 AFYVLNETRC--GRYIYALGGNEDSARLSGINTTKMKMLVYVISGVTAAISGVVVTSRIG 231

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             S       E   + ++V     + GG  S++       I+  +      +N   +  L
Sbjct: 232 SASAIAGTGYELDAIAAVVLGGTSLAGGEGSIAGTIIGALIIGVLNNGLNLLNVSPYYQL 291

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 292 IVKGLVILLAVMV 304


>gi|163854248|ref|YP_001642291.1| inner-membrane translocator [Methylobacterium extorquens PA1]
 gi|163665853|gb|ABY33220.1| inner-membrane translocator [Methylobacterium extorquens PA1]
          Length = 289

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 88/306 (28%), Gaps = 26/306 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             + S      +Y + A G  I     G ++     A  +GA        + G  + L I
Sbjct: 4   STLVSGLGLGSMYGLVALGFHITFAVSGTVNFAQGSAVTLGAVLGYTFAVQLGWPMPLAI 63

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             S       G+ +    ++      + A L+ +     IL      T G          
Sbjct: 64  AASLAGCAGLGLAVERLLVRPFVVRGSDAWLLATVAGGIILDNVLLFTFG---------- 113

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                ++ S +                  + +     + +I    R T +      +  N
Sbjct: 114 -KEPRSLPSALVAAPVQVLGAGVYPLQLLIPVVGVAAAVAIRAVFRGTELGRVLLAVAQN 172

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   +   +      AFA+S+   G AG   A                I   ++ ILG
Sbjct: 173 SEAARLMGIDVARTVACAFALSAVLAGAAGLLIAPLFSV--SAEMGALFGIKAFAVAILG 230

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S + +  A  +   V                      +     ++   + L + +R 
Sbjct: 231 GIGSATGVVLAGLLYGLVEAGVTATLG-------------SGATQIVVFSVIILALALRP 277

Query: 337 HSLLRL 342
           + LL  
Sbjct: 278 NGLLGR 283


>gi|149915146|ref|ZP_01903674.1| branched-chain amino acid transport system permease component,
           putative [Roseobacter sp. AzwK-3b]
 gi|149810867|gb|EDM70706.1| branched-chain amino acid transport system permease component,
           putative [Roseobacter sp. AzwK-3b]
          Length = 308

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 97/301 (32%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   ++V+ A GL+I+ G +G++++       +GAY   I+ + +   +  L  +   +
Sbjct: 22  LILFSVFVLMALGLAIIFGQMGVINMAHGEFMILGAYVTYIMSNIFADYMPALFGMYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     +       F    L     +       +L  W      +           +G +
Sbjct: 82  AMIFAFLASGALGLFIEWAL--IRHLYKRPLDTLLATWGLSLILQQIYRSVFGAREVGVS 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +      +  +   I   +V++    +S  + + + R+      R I  N+    +
Sbjct: 140 IPDWMMGSLPLTDMIEVPINGIFVMILAVTISFGVWIMMYRSNWGKQVRVINQNRVMADA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +     +     F +     G+AG+ F       +         +    +V+ GG  SL 
Sbjct: 200 VGINTAWTDRLTFGIGCGVAGVAGSAFTMIGS--TGPTAGQLYIVDTFLVVVFGGAGSLL 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     +                         L ++ +  ++++R   L  L
Sbjct: 258 GTIASAFSISQAQSIMEFFLSGSMAK-------------VLTLLTVVGILMIRPQGLFTL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|89068380|ref|ZP_01155783.1| ABC transporter permease protein [Oceanicola granulosus HTCC2516]
 gi|89046034|gb|EAR52093.1| ABC transporter permease protein [Oceanicola granulosus HTCC2516]
          Length = 306

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 110/306 (35%), Gaps = 15/306 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++  + A GL+++ G +GL++L     Y +GA++   +    G  +  L+  
Sbjct: 10  ILNGLQFGVMLFLMAAGLTLIFGVMGLINLAHGSLYMVGAFAAAAVAGATGSFLLGLVAA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               + A  +I      +          L  ++    +L  +  I     G   A   + 
Sbjct: 70  LTAAAVAGAIIEVAVIRR----------LYKADHLDQVLATFALILIFSEGTRWAFGSFP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   +   +         + Y ++   ++     ++A + L + RT I    R   ++++
Sbjct: 120 LFLDIPDWLSGPVSLPGGIQYPLYRLALIGAGLAVAAGLWLLIERTRIGIQIRAGENDRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+
Sbjct: 180 MIAALGVDISRLYTLVFALGAALAGLAGALVGAIQSV--QVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMR 335
            S+        ++     L           +     +  +  +     + I + +V+++R
Sbjct: 238 GSIKGAFVGALLVGLTDTLGGIFLPELLKLVTDPSTASTVGASVASMAIYILMSIVLILR 297

Query: 336 SHSLLR 341
              L  
Sbjct: 298 PTGLFG 303


>gi|94310172|ref|YP_583382.1| inner-membrane translocator [Cupriavidus metallidurans CH34]
 gi|93354024|gb|ABF08113.1| Branched-chain amino acid ABC-type transport system [Cupriavidus
           metallidurans CH34]
          Length = 288

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 112/302 (37%), Gaps = 26/302 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL+++ G +G+++L     Y +GAY      +    ++++ +P+ 
Sbjct: 11  LNSVQYGLLLFLVASGLTLIFGIMGVINLAHGSFYMLGAYL-AFTLASLTGNLFIALPLG 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++   G ++      +      +  ++M+     +  + + I  G             
Sbjct: 70  IVLAVLFGYVLEWAFFSYLYQRDHLQQVLMTYGLILVFEELRSILVGDDVH--------- 120

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G  V SL+ +     + + Y ++  ++      ++ ++   +RRT +    R    N++ 
Sbjct: 121 GVQVPSLLDWSLPVGNDMTYPVYRLFISAVCLLVAGAMYYVIRRTRVGMMIRAGATNREM 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             SL   +       FA+  A   +AG   A                II   +V++GG+ 
Sbjct: 181 VQSLGVNVTVLYRFVFALGVALAVLAGMIAAPVSSV--YPGMGGQVLIICFVVVVIGGIG 238

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A+ ++  V                     +      L+ + + +++L +   L
Sbjct: 239 SVKGALVASLLIGFVDTFGKVF--------------WQDAAGVLVYLLMAVILLWKPQGL 284

Query: 340 LR 341
            R
Sbjct: 285 FR 286


>gi|288919851|ref|ZP_06414175.1| inner-membrane translocator [Frankia sp. EUN1f]
 gi|288348766|gb|EFC83019.1| inner-membrane translocator [Frankia sp. EUN1f]
          Length = 310

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 87/313 (27%), Gaps = 20/313 (6%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY--SYVILGSRYGLSIW 93
            +      +   +Y + A G ++V G L L++      + +GA+   +       G    
Sbjct: 8   SQLAVDGLMVGALYAVIALGYTLVYGVLQLINFAHSEVFMLGAFGGLFACRALVPGDGAT 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
                +A +     +                A   +       L             +  
Sbjct: 68  PAGLAAAGLVLVGLVAGAAAGGAAAYTLERCAYRPLRRRGAPRLAYLISAIGASLFAFNL 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVI---YEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               F   +V     F       V+          +      +  ++   +  T +  + 
Sbjct: 128 AGKEFGRQSVPVPDLFANRTVVTVLGAEISTQSLVIAATALLMLLAVDHLVADTRLGLSI 187

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +  + +    +   +    +  F +     G  G  +A + +        F   I   
Sbjct: 188 RAVAQDAECAGLMGVDVQRVIVVTFVLGGLLAGAGGFLYAMTFNA--SYTMGFVPGIKAF 245

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  +LGG+ ++        +L  V      +    + +++ F               L  
Sbjct: 246 TAAVLGGIGNVRGAVLGGLLLGLVESFGGYLFDASYKNVIAFT-------------VLVG 292

Query: 331 VILMRSHSLLRLR 343
           V+L+R   LL  R
Sbjct: 293 VLLVRPSGLLGTR 305


>gi|241113152|ref|YP_002972987.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240861360|gb|ACS59026.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 345

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 115/336 (34%), Gaps = 34/336 (10%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L  +  +L+ L                 + IYV+ A   + + G  GL+S+   + + 
Sbjct: 23  VALGCMAAVLVLLMFAPAVLGAGAIDRMTALFIYVILAAMWNALAGFGGLVSVGQQVFFG 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY   I  +  GL+ ++ +  +A+++GA  + + L  L+ +G   AI    +     +
Sbjct: 83  LGAYFT-IRLADAGLNPFVALFAAAIVTGALSIPLSLFMLRLKGGEFAIGMW-VIAELAH 140

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L+    +  G+ G  +     +                        +Y++ L       
Sbjct: 141 LLVNLDRLIQGETGTSLISLNVY----------------DGGTRRATIYWLALIAMAALL 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF-AASRD 254
             +  L R+    A + IRDN++A  S+   +I  K   F +++  I +AG  + A +  
Sbjct: 185 GALFILMRSRAGAAMQAIRDNEEAATSVGVRVIATKRLLFVLAAFGIAVAGGLWLATATT 244

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                 F       +I +V++GG+           +   +  +                 
Sbjct: 245 FQPKTYFSVQWTAYMIFMVLVGGIGKFEGAILGAILFFVIETVFGS-------------- 290

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              + +   +     +  L     L          +
Sbjct: 291 -AGVWYLIGLGATALIFSLYLPRGLWGEIERRFDFQ 325


>gi|148654791|ref|YP_001274996.1| inner-membrane translocator [Roseiflexus sp. RS-1]
 gi|148566901|gb|ABQ89046.1| inner-membrane translocator [Roseiflexus sp. RS-1]
          Length = 293

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 97/304 (31%), Gaps = 24/304 (7%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            S      I+ + A G  ++  S  +++        IGAY         GL   + + ++
Sbjct: 9   LSGVANGAIFALVALGFVLIYKSSDVINFAQGELLLIGAYLTYTTVEMIGLWWPIGVVIA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++   G+++    L+       I+ ++++    ++L        G         L   
Sbjct: 69  VVLAAIVGVLVEQLVLRPLIGEPTISVIMVTIGLSSLLRAIIGGIWGVTPRTAPQFLPRD 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                                +   +       L A + L+ R +    A R + D+Q+A
Sbjct: 129 T-----------ITLFGANVGVDRLWAFALALTLFALLTLFFRYSREGIAMRAVADDQQA 177

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             S+  ++      A+A+++    + G    +    +S  + +     +V  +VILGG+ 
Sbjct: 178 ALSMGISVKRVWAIAWAIAAVTASVGGILLMSIFGGVSGQIARVGL--LVFPVVILGGLD 235

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        I+  +     G                 +    +           R + L
Sbjct: 236 SIPGAIVGGLIIGLLQSFAGGYLPPELGMGEVVPFIVLLLILLV-----------RPYGL 284

Query: 340 LRLR 343
              R
Sbjct: 285 FGQR 288


>gi|91787728|ref|YP_548680.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91696953|gb|ABE43782.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas sp. JS666]
          Length = 291

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 79/303 (26%), Gaps = 26/303 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                IY + A G +++  + G ++        + A+  +   S     +   +    + 
Sbjct: 12  LATGSIYALAALGFTLLWQASGTINFAQGEFVMLPAFMLLGFISLGAPMLVSFVLTVLLA 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G +     +     Y  +  ++ +      +        G    Y A+   F    
Sbjct: 72  VLLLGWVFKRGVVDPLFKYGMMPIVVATIGLSIAMRN------GVRAGYSAEAHPFPSLF 125

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
              L        +      F   +++ +   +        RT    A + +  N ++   
Sbjct: 126 ADKLYNIAGVTITLQDVGTFALAMIIVLATQAFLA-----RTVTGRAMQAVAQNTESASV 180

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   +       FA+++     A          ++                I+GG  +  
Sbjct: 181 LGINVPRMIFYTFAINAVLAVAAALLVTP--TYLAKFDMGEGLGTKAFFAAIIGGFNNSR 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  I+     L        +   +               +   +VIL +   LL  
Sbjct: 239 GALLGGLIVGVCENLASAYISPAYKDAVAL-------------VIFMIVILFKPQGLLGK 285

Query: 343 RTP 345
           +  
Sbjct: 286 KEE 288


>gi|118580094|ref|YP_901344.1| inner-membrane translocator [Pelobacter propionicus DSM 2379]
 gi|118502804|gb|ABK99286.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Pelobacter propionicus DSM 2379]
          Length = 299

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 90/309 (29%), Gaps = 26/309 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y  S      IY +   G SI+  S G+++        +G    +   +   L +W  I
Sbjct: 14  QYTLSGLSTGAIYALIGIGFSIIYNSTGIINFAQGEFVMLGGMLTLFFINLLQLPLWAAI 73

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P +   +   G++    +++       +  +I++     ++     +  GK         
Sbjct: 74  PCAVFCATLAGLLFERLAIRPLRRPTPLNLVIITIGGSILIRGISMLLWGKDTHS----- 128

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + S                   ++L     +  +   +   T    A R    N
Sbjct: 129 ------LASFSGDDPIALGGATLLPQHLWILGITLVIIIANKFFFYHTISGKAMRACSYN 182

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   +   +    L +F +SSA   +AG   A      +         +      I+G
Sbjct: 183 SRAAGLVGIDVRRMVLFSFVISSAMGAVAGIIVAPLTM--TSYDVGVMLGLKGFCAAIIG 240

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM+S         +L  +  L  G+    +   + F     +                R 
Sbjct: 241 GMSSGMATVVGGVLLGVLESLGAGLVSSGYKDAIAFIILLLILLI-------------RP 287

Query: 337 HSLLRLRTP 345
             L      
Sbjct: 288 QGLFGKAEA 296


>gi|94310799|ref|YP_584009.1| inner-membrane translocator [Cupriavidus metallidurans CH34]
 gi|93354651|gb|ABF08740.1| ABC-type transporter, permease component: HAAT family [Cupriavidus
           metallidurans CH34]
          Length = 323

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 110/320 (34%), Gaps = 27/320 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M + GL+++   +G+L+      Y +GAY          +  W  +  
Sbjct: 16  LLNGVSYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAY--TIATKVGFWPALIF 73

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G ++    L+    +  +A L+ +     ++ +   +  G         L  
Sbjct: 74  APLLVAGAGALVERFGLRTVHKFGHVAELLFTFGLAYLIEEGVKLVWG---------LAA 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   +  ++    F      +  +  +++L    +  +I L L RT I    +    + +
Sbjct: 125 VPYRIPEVLDGPLFTVFTSSFPKYRAFMMLVSLGMLVAIYLVLTRTRIGLVIQAALTHPE 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    +  F   +A  G+AG         ++      +   IV  + ++GGM
Sbjct: 185 MVEALGHNVPRVFMMVFGGGAALAGLAGVIGG--NAFVTEPSMAAAVGSIVFVVAVVGGM 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR--------------HTTLM 324
            SL     A+ ++  +      ++      L     +                     L 
Sbjct: 243 GSLVGAFIASILIGVLQTFAVTIDASMAGLLGSLGMTVTDATPLSSLWKLTVAQVAPVLP 302

Query: 325 VIALFLVILMRSHSLLRLRT 344
            + + ++++ R   L+  R 
Sbjct: 303 YVLMVVMLIFRPRGLMGTRE 322


>gi|288932042|ref|YP_003436102.1| branched-chain amino acid ABC transporter permease [Ferroglobus
           placidus DSM 10642]
 gi|288894290|gb|ADC65827.1| inner-membrane translocator [Ferroglobus placidus DSM 10642]
          Length = 326

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 51/322 (15%), Positives = 98/322 (30%), Gaps = 24/322 (7%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
              L+ LF+  +  +     + + I  YV      +I +G  G +    V    +GAY  
Sbjct: 11  LIFLIILFVIGSSVEGMWQPIALIIF-YVALGQAFNIFLGLTGYVDFGYVAFLGLGAYGM 69

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +    +     + I +  +       I+ L               I +         + 
Sbjct: 70  ALAIQNFAHLGLVSIAIGVVAGAIFAAILSLAVGGVALRLRGAYFAIATIGVNEGFRFFI 129

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
             T    G        F+  T  S    F       +   F+ ++       SA I    
Sbjct: 130 EGTRLWGGTEGIVLSGFMRKTFGSETTNFLSTYVSDVALFFVAFI-------SALITSIY 182

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA--SRDRISPD 259
            R+ I  A   +R++++    +   +   K+ AF  S+ F G+ G+             D
Sbjct: 183 LRSRIGYALLAMREDEEVAKVMGINVTKYKILAFITSAIFAGIIGSLAWTLKLTYVFPED 242

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +F     +  I IV+LGG  +L            +      +              F   
Sbjct: 243 VFNIVYTVEAIVIVMLGGAGTLLGPLVGGTFYALLKYYLNVI--------------FPGV 288

Query: 320 HTTLMVIALFLVILMRSHSLLR 341
              ++   L  V+++    L+ 
Sbjct: 289 QLLILAPILIAVVVLFPEGLVG 310


>gi|284029738|ref|YP_003379669.1| inner-membrane translocator [Kribbella flavida DSM 17836]
 gi|283809031|gb|ADB30870.1| inner-membrane translocator [Kribbella flavida DSM 17836]
          Length = 345

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 99/324 (30%), Gaps = 21/324 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFL----GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           L ++  +  LLAV    ++F           S   + ++   +    + A G++ V+   
Sbjct: 27  LFRFQSVFGLLAVFVAAIIFSPRRNGEILFLSADNLANVVRAVSEIGIIAVGMTFVILIG 86

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+      + A    +L           + +   I    G + G+ +         
Sbjct: 87  G-IDLSVGAVLGLAAVGSAVLMVESDWGFVPSVLLVLAIGLVFGALQGMATAMIGIQSFI 145

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           +            L   +              +        +             +   +
Sbjct: 146 VT-----------LAGLQIARGLARIWSDGQGVAIAYGDGPNEAPSSFALLGERTFGGLV 194

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
              +L    ++ + +++LR +A S     +  N+KA       ++  K++ FA+      
Sbjct: 195 PIPVLIFAVVAIAAVVFLRISAFSRHLYAVGGNEKAARLSGVPVVRVKIAVFAICGLLAA 254

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +AG   A   ++ SP+     E   + ++VI      GG  S++       +L  +  + 
Sbjct: 255 LAGIVHAVQLNQGSPNDGIGYELDAIAAVVIGGTSLAGGRGSVAGTVAGALLLGVLNNIL 314

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTT 322
              N      LL            
Sbjct: 315 ALNNIDSNIQLLIKGLVIVAAAAL 338


>gi|326317159|ref|YP_004234831.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323373995|gb|ADX46264.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 317

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 53/320 (16%), Positives = 118/320 (36%), Gaps = 27/320 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M + GL+++   +G+L+      Y +GAY          +  W  + +
Sbjct: 10  LLNGLSYGLLLFMLSSGLTLIFSMMGVLNFAHTSFYMLGAYFAY--SISGVVGFWPALVI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +  GA G      +L+    +  +  L+++     ++++   +  G++ +  A     
Sbjct: 68  APLAVGALGAAFERYALRRVHKFGHVPELLVTFGLSYLILEVVQLVWGRSTVPYA----- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + S ++   F      +     +V+L    +  S+ L L RT I    +      +
Sbjct: 123 ----LPSQLQGPLFTLYGTQFPKSRSFVMLVALLMLLSVWLVLTRTRIGLVIQAALKQPE 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    +  F    A  G+AG         ++      S   I+  +V++GGM
Sbjct: 179 MVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NTYVTEPAMAASVGSIIFVVVVVGGM 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSL--------------LKFDCSFNMRHTTLM 324
            SL+    A+ I+  V      +++   ++L                   + +     L 
Sbjct: 237 GSLAGAFLASLIIGLVQTFAVALDYSLADALRTAGMAVTDQTFGYPVLKLTISQVAPILP 296

Query: 325 VIALFLVILMRSHSLLRLRT 344
            + L L+++ R   LL  R 
Sbjct: 297 YLFLVLILIFRPKGLLGTRE 316


>gi|291294539|ref|YP_003505937.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
 gi|290469498|gb|ADD26917.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
          Length = 302

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 97/308 (31%), Gaps = 15/308 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           + + S      IY + A G  ++  S  +++       AIGA+    L     L + L  
Sbjct: 6   QNLISGVAVGCIYALAALGFVLIYKSSRVINFANGQFIAIGAFMAYALAVWGKLPVLLAA 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ +++   G ++    L+       I+ ++++    ++L           G+      
Sbjct: 66  LLAMLLTAGLGFLVERVFLRRLVGQPIISVIMVTIGLASVL----------DGLMYLTPF 115

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                T    +         V         +            + +R+ +  + R + D+
Sbjct: 116 GSGNFTFPQFLPQGGLSLGGVSVSYPQLLAIGFTAIFLVLFGWFFQRSVLGVSMRAVADD 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           Q A  S+  ++      A+AV+      AG                 +  + V   VILG
Sbjct: 176 QMAAMSVGVSVQRVFALAWAVAGLTAAAAGIVVGMVSGL--NQDGLIAIGLAVFPAVILG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+        I+  +           F+   +           +  + L +++  + 
Sbjct: 234 GLDSVPGAVVGGIIIGVLQSFSTAYLDGLFS---QIGLVGGGSQYVMPFVVLLVMLWFKP 290

Query: 337 HSLLRLRT 344
           H L     
Sbjct: 291 HGLFGTEE 298


>gi|269125018|ref|YP_003298388.1| inner-membrane translocator [Thermomonospora curvata DSM 43183]
 gi|268309976|gb|ACY96350.1| inner-membrane translocator [Thermomonospora curvata DSM 43183]
          Length = 296

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 85/309 (27%), Gaps = 21/309 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G  I+  +  +++         G +          +  W  +  
Sbjct: 8   LLNGVSIGAVYALIALGFVIIFKASEVVNFAHASLLLAGGFIVAE--LHPRIGFWAALAA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +   G ++    ++           I++     +L+       G   + + D    
Sbjct: 66  GIAAAALLGALIEFCVIRRSKAASHSVLAIVTIGVDIVLVTELTRRIGTDVLAMGDPWGS 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +  +        + V+    +   LL             + T    A R   ++ +
Sbjct: 126 RVVHLGPVSIAQTRVVALVVAAALITTFLLAF-----------KYTGWGVAMRAAAEDGE 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    LSA    +  +    A F A       D    S  +      ILGG+
Sbjct: 175 TAALMGVRLSRVSLSA-WAVAGALAAVAALFLAVFPTPGLDRTTASAAMKAFPAAILGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +       I+     L  G                         + + +++L+R   
Sbjct: 234 DSTTGALVGGLIVGVTESLATGYQSELSFLGRGIGDVAP-------FLVMIVILLVRPAG 286

Query: 339 LLRLRTPSN 347
           LL  R  + 
Sbjct: 287 LLGTRELTR 295


>gi|218672304|ref|ZP_03521973.1| inner-membrane translocator [Rhizobium etli GR56]
          Length = 266

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 65/272 (23%), Positives = 118/272 (43%), Gaps = 28/272 (10%)

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
               + +GAY   IL + YG+S    +P +A ++ A G+++GLP+L+ +G  LAI T  +
Sbjct: 8   QGTLFGVGAYVTAILNATYGISSLATLPAAAAVAAAVGLVIGLPALRLQGLQLAIVTFGI 67

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +  F  +L+K   +T G +G+ V                         + E+++Y + L 
Sbjct: 68  AAAFPQLLLKMGSLTGGVSGLPVDAPETP--------------DFMADVPELWLYLISLA 113

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              + A ++  +       A R  RDN +   +L   +   +L AFA+SSA  G+ G  F
Sbjct: 114 CAGVGALLVSRMLFGDAGRALRAQRDNPQIAQALGVNLTRTRLWAFAISSALAGLGGGVF 173

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A     ISP+ F    +I ++   I+GG+TS          ++ V      +N    N  
Sbjct: 174 AIVSGFISPESFLAILSINIVIGSIVGGVTSTVGAFVGGLFMVFVPSWASDINLSLGN-- 231

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                        +  +AL L++++  + +  
Sbjct: 232 ------------LIYGLALILIMMVARNGVTG 251


>gi|110677925|ref|YP_680932.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
 gi|109454041|gb|ABG30246.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
          Length = 306

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 106/308 (34%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + A GL+++ G +GL++L     Y IGA++   +    G  +  L   
Sbjct: 10  VLNGLQFGVMLFLMAAGLTLIFGVMGLINLAHGSLYMIGAFAAAAVAGLTGSFLLALFAA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A  + A  +I  +   +          L  ++    +L  +  I     G       + 
Sbjct: 70  MAAAAMAGVLIETVVIRR----------LYATDHLDQVLATFALILIFSEGTRWVFGSFP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   +   +         + Y ++   ++     +   + L + RT      R   ++++
Sbjct: 120 LFLDIPDAVSGPVSLPGGIQYPLYRLVLIAVGLAVGLGLALLINRTRNGVQIRAGENDRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+
Sbjct: 180 MIAALGVDISRLYTLVFALGAALAGLAGALVGAIQSV--QVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFN---SLLKFDCSFNMRHTTLMVIALFLVILMR 335
            S+        ++     L        F           + +   +  + I +  V++ R
Sbjct: 238 GSIKGAFVGALLVGLTDTLGGIFLPELFKLFTDAATATSAGSALASMAIYILMGAVLIWR 297

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 298 PTGLYGAR 305


>gi|299530826|ref|ZP_07044241.1| inner-membrane translocator [Comamonas testosteroni S44]
 gi|298721342|gb|EFI62284.1| inner-membrane translocator [Comamonas testosteroni S44]
          Length = 313

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 63/329 (19%), Positives = 123/329 (37%), Gaps = 39/329 (11%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           IL              L    + +Y  S+ I IL+Y + A   ++  G    +SL  V  
Sbjct: 6   ILIWAICAIATAGLALLPRWLTDEYYLSLMISILMYCVLATAWALFSGPTRYISLATVAF 65

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           + +GAY   + G     +  L I  +A +     +I+GL +L+  G Y  I +  ++E+ 
Sbjct: 66  FGMGAYVTAVFGESLPWAAVLGI--AAGVGLVMALIVGLSTLRLSGVYFVIFSFGLAELV 123

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           + ++  W+                       ++ +         I ++ +Y+ LL M  L
Sbjct: 124 KQLVTWWEV----------------------NITKDLGRYVFVEITQLDIYWQLLAMLAL 161

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
             ++   + R+ +  A R I +++     +      AKL  FA+S+ FI + GA  A   
Sbjct: 162 VLALRALINRSRLGLALRVIGEDETVATHVGINTTTAKLLLFALSAVFITVTGAIMAPRW 221

Query: 254 DRISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
             I P   F  + +   + + +LGG  +L         L+ + E                
Sbjct: 222 TYIDPSIAFAPAVSFQTLIMALLGGAGALFGPILGAVPLVLLFEYLAA------------ 269

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             +F    + L+ +   +++      L  
Sbjct: 270 --NFPNHFSILLGLVFIVIVYFIPQGLSG 296


>gi|300714605|ref|YP_003739408.1| ribose transport permease system protein [Erwinia billingiae Eb661]
 gi|299060441|emb|CAX57548.1| Ribose transport permease system protein [Erwinia billingiae Eb661]
          Length = 322

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 89/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALIVLIAIVSSLSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L      ++  +    A+ +    +   + +                   Q 
Sbjct: 82  LTGAVGASLVGLEVNALVAVAGSLALGAAIGALTGTIVAKGK---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        I     ++ + F +A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPVNTGFNDNADLFGWFGIGRPLGIPTPVWIMAIVFFAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A      ++   K+  +A+      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGISVSRVKIIVYALCGMLAALAGTIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIMGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|260564732|ref|ZP_05835217.1| branched-chain amino acid ABC transporter [Brucella melitensis bv.
           1 str. 16M]
 gi|260152375|gb|EEW87468.1| branched-chain amino acid ABC transporter [Brucella melitensis bv.
           1 str. 16M]
          Length = 333

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 105/278 (37%), Gaps = 14/278 (5%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+  +  L +       L  +  ++    +G       + ++  +I+   +    L +V 
Sbjct: 1   MTELTQPLPQTRHSYAGLIGIVAIIAASVVGWFLFPDNL-ALLTRIIAIALLVLSLDLVT 59

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           G  G+ +L     +  GAY   I  + +      L+  +  +     G++ G   L+  G
Sbjct: 60  GYCGIATLGHAAHFGAGAYGAGIAAAHFGVTDPILMTVIGLLAGAVTGLVSGAVILRATG 119

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
               + ++ +  +F     K    T G  G+         G               F +Y
Sbjct: 120 LAQLVLSIAVVHLFHEAANKASGWTGGSDGLSGISPDPIFGI------------FEFDLY 167

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              +Y   + +  +S   + ++ R+      R ++++     ++  ++  A+L  + +S 
Sbjct: 168 GRTVYIYAVILLLISFIFLRYVVRSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISG 227

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           A  G++GA  A S   +  D   F+ +   + +++LGG
Sbjct: 228 AVAGISGALNAISTQVVGLDSLSFTMSAEALVMLVLGG 265


>gi|220919842|ref|YP_002495145.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219952262|gb|ACL62653.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 289

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 98/303 (32%), Gaps = 29/303 (9%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +  +   IYV+ A GLSI  G LG+++      +A+GAY        Y +  W  + ++ 
Sbjct: 11  NGLVLGFIYVLIAVGLSITFGLLGVINFAHGAFFALGAYVAW---QMYQVFGWPAVVLAP 67

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
            I G  GM + +  ++       + +LI++     ++        G  G         +G
Sbjct: 68  PIVGLVGMAVEVTIIRRLYGKEPLLSLIVTFALALLIEALIRFVWGADGKPFNPPPVLVG 127

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                        +  ++   +   VL+        + ++L  T      R    + +  
Sbjct: 128 I----------VEAGPLLITTYRVAVLVATTATLLGLWVFLAFTPYGRILRAGSRDPEMV 177

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             L   +     + F +      +AG   A             S  +    +V +GG+ S
Sbjct: 178 ELLGINLPRVLTAVFGLGCGLAAIAGVLAAPL--WTVSPSMAASAVMPAFVVVAIGGLGS 235

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                 A   +  V+ L          +               M   +F V+L+R   L 
Sbjct: 236 FRGAVVAGLAVGVVMSLTIQFKAEAAAAS--------------MYALMFAVMLLRPRGLF 281

Query: 341 RLR 343
             R
Sbjct: 282 GER 284


>gi|33594311|ref|NP_881955.1| putative branched-chain amino acid transport permease [Bordetella
           pertussis Tohama I]
 gi|33564386|emb|CAE43692.1| putative branched-chain amino acid transport permease [Bordetella
           pertussis Tohama I]
 gi|332383722|gb|AEE68569.1| putative branched-chain amino acid transport permease [Bordetella
           pertussis CS]
          Length = 293

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 95/305 (31%), Gaps = 23/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   IY +   GL+++ G L +++        +GAY    L    G+   L +P+
Sbjct: 9   LVNGLILGAIYGLIGVGLNVIFGVLRVVNFAHGEFLVLGAYFAYYLLEYAGIDPLLALPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G ++    +             +  +F   ++          G  +      
Sbjct: 69  AFGAFFLAGYVLYFVLIPRLSKADDPEISSLLLMFGVSIM---------LGAIMLLAFEA 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              ++   I    F    V+        L     + A +  +L RT +  A RTI  N+ 
Sbjct: 120 DARSLPYEIEPVFFKIGPVLIPTVRLIALAIALAVVAVLAWFLYRTQLGKALRTIIMNRD 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +      AF +      + G   A      SP M      +I   +++LGG+
Sbjct: 180 AVRIVGINVERLSAVAFGLGIGLAAVTGVLVAMVFPAFSPFM-GNDYTLIGFIVIVLGGL 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                      +     ++          ++  F             + +  +I +R   
Sbjct: 239 GHPVGALVGAMLFGVTEQVSVVFFNPSIATICGF-------------VLMVAMIFVRPTG 285

Query: 339 LLRLR 343
           L   R
Sbjct: 286 LFGHR 290


>gi|158318754|ref|YP_001511262.1| monosaccharide-transporting ATPase [Frankia sp. EAN1pec]
 gi|158114159|gb|ABW16356.1| Monosaccharide-transporting ATPase [Frankia sp. EAN1pec]
          Length = 335

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 93/312 (29%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  L   +      +      +  Q+++    A G ++++ + G + L+     A
Sbjct: 33  VIALVLAGLFFSIKSDRFLTGGNFSLILQQVMVVGTLAIGQTLIILTAG-IDLSNGAIMA 91

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +G      L    GL+ +L I +  +   A G++ G      R     +    ++  F  
Sbjct: 92  LGNVLITTLAVDAGLNPFLAIGLGLLACTAFGLLNGGLVTTIRLPPFIVTLGTLNIAFAL 151

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             I                      T             +F + +  + Y  L M  L  
Sbjct: 152 THIY-----------------SNEETISDLPATLTYLGKTFTVGQTEITYGSLLMLALFG 194

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L +T+       + DN +A            L+ +AV+    G+A     +    
Sbjct: 195 ITWCILTQTSAGRHIYAVGDNPEAARLTGIRTRRVVLTVYAVAGLIYGIASLLLVSRTGV 254

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P+  +      + ++V     + GG  S+        I+  V      +       +L
Sbjct: 255 GDPNAGQTDNLDSITAVVLGGTSLFGGRGSVVGTLLGALIVGVVRNGLQLIGTKSIYQVL 314

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 315 ITGILVILAVAI 326


>gi|332529858|ref|ZP_08405811.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
 gi|332040700|gb|EGI77073.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
          Length = 363

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 117/334 (35%), Gaps = 15/334 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +      L+ L +    S     S+  Q+ I ++     ++++G  G+LS    +   +G
Sbjct: 15  IIWGLFALVLLTMPRLFSSSLAVSLLSQMGIAIIACLSYNMLLGQGGMLSFGHAVYSGLG 74

Query: 78  AYSYVI---------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           AY  +             +  L + LL  V  +       + G  + K  G   A+ TL 
Sbjct: 75  AYMTIHALNLMSGLAKTGQPFLPVSLLPLVGGLAGLFFAGLFGYVTTKKAGTTFAMITLG 134

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           M+E+   + + +     G+AG      +       + +++ F          I +YY++ 
Sbjct: 135 MAELVFAMSLMFAEFFGGEAG------ITANRVVGKPVLQGFFDKGINFGPGIQVYYLIA 188

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
              F+  +++    RT +      +RDN +    +  +    +  AF V+  F G+AG  
Sbjct: 189 VYTFVCVALMYAFTRTPLGRILNAVRDNPERVEFIGYSTQHVRYMAFMVAGFFAGIAGGL 248

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            A   + ++ ++     +   +    LGG T          +L+    +   +   +   
Sbjct: 249 GAILFEIVTAEVVGPLRSGGYLLFTFLGGATVFFGPIIGGVLLVLTSVMLSELTKAWLLY 308

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           L        M     +   + + + +        
Sbjct: 309 LGLIFLFMVMYAPGGVASLVLMNLRVAKFGFWGR 342


>gi|319898947|ref|YP_004159040.1| permease protein of ABC transporter [Bartonella clarridgeiae 73]
 gi|319402911|emb|CBI76462.1| permease protein of ABC transporter [Bartonella clarridgeiae 73]
          Length = 297

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 51/282 (18%), Positives = 98/282 (34%), Gaps = 7/282 (2%)

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           + SL      AIGAY   I           ++ +   I+     +            L+ 
Sbjct: 1   MFSLGHAGFMAIGAYVCAIFLLSPEQK--EMMWILEPIAEPLKNLQLSFFFSVVISGLSA 58

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           A + +   F  + +    +     G     R+      + +            I +    
Sbjct: 59  AIIGLLIAFPVLRLGGDYLGIATLGFAEIIRV----LIINATPFTNGSLGIKGIPQCATL 114

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           +   G    +   I+ L ++   N  R IRD++ A  ++     F +  +F + + F G+
Sbjct: 115 WWNYGWLAFTIIFIILLLQSNTGNVLRAIRDDEIAAKTMGVNAFFYRCFSFTIGAFFAGV 174

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            GA  AA    I P MF F     ++ IV+ GG+ S++    ++ I+  ++E    +   
Sbjct: 175 GGALTAALISTIDPKMFNFILTFNILMIVVAGGLGSITGSVISSIIITIMLESLRIVENP 234

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                +            +  + L ++IL     LL  R  S
Sbjct: 235 LNLGFIYIP-GIPGLRMVIFSLILLVIILYWRKGLLGQREFS 275


>gi|56696808|ref|YP_167170.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56678545|gb|AAV95211.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 434

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 97/274 (35%), Gaps = 21/274 (7%)

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + L  P   +++     ++G  +L  R DYLAIATL ++EI   ++     +  G   +
Sbjct: 161 PVLLAWPAGGLLAAGAAWLIGKTALGLRSDYLAIATLGIAEIIIAVMKNEDWLARGVKNV 220

Query: 151 YVADRLYFLGTTVRSLIRF---------FRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               R       +++   F             +S +  ++    + + +  +   +    
Sbjct: 221 IGLPRPVPYEIDLQNDAGFVESAASLGIDPVTASTLYVKLGYSVLFMVVLLILLWMAQMA 280

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            ++      R IRDN+ A  ++   +    L  F + SA  G+AGA       +++P  +
Sbjct: 281 LKSPWGRMMRAIRDNEVAAEAMGKDVTRRHLQIFVLGSAVCGIAGAMMTTLDGQLTPGTY 340

Query: 262 KFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR- 319
           +      +V  +VI+GG  +         ++  +      +  +    +       +   
Sbjct: 341 QPLRFTFLVWVMVIVGGSGNNFGAVLGAMLIWFLWVQVEPLGLFLMQVITSGMAEGSALK 400

Query: 320 ----------HTTLMVIALFLVILMRSHSLLRLR 343
                         M I L LV+      L+  +
Sbjct: 401 SHLIDSAAHMRLLTMGIILLLVLRFSPRGLIPEK 434



 Score = 39.1 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 32/86 (37%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
              +   +L    G  +S      +    LI  + A G+++  G  GL ++  +   A+G
Sbjct: 9   ALFLGIAVLVAITGFMQSWNSAILIVNMGLISAIMAIGVNLQWGFAGLFNVGIMGFVALG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMIS 103
             + V++        W       +++
Sbjct: 69  GLAVVLVSEPLSPEAWSAGGFGIVLA 94


>gi|239978891|ref|ZP_04701415.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces albus J1074]
 gi|291450775|ref|ZP_06590165.1| branched chain amino acid transport permease [Streptomyces albus
           J1074]
 gi|291353724|gb|EFE80626.1| branched chain amino acid transport permease [Streptomyces albus
           J1074]
          Length = 310

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/292 (11%), Positives = 87/292 (29%), Gaps = 7/292 (2%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A G ++V G + L++      + IG +  +           +L+ +  MI       + 
Sbjct: 21  IAIGYTMVYGIVQLINFAHGEIFMIGGFGALTAWLWLPDGTGVLVALPVMILLGMVFSVT 80

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           +     R  Y     L        ++         +  ++        G          R
Sbjct: 81  VAIGAERFAY---RPLRGGPRLAPLITAIGLSLVLQQLVWSFYPKARDGALSFPHFEGGR 137

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                        ++L+       ++ +++ +T    A +    +      +        
Sbjct: 138 IDLGAFSISRGDLFLLIAAPVCMIALGVFVSKTRTGRAMQATSQDPDTAKLMGINTDRII 197

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           ++AF + +AF  +A          +   M  F   +   +  +LGG+ ++        +L
Sbjct: 198 VTAFGIGAAFAAIAAVAHGLKYGEVQFRM-GFIAGLKAFTAAVLGGIGNIYGAMIGGLVL 256

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                L            +    ++      +++I + L+   R   +L  R
Sbjct: 257 GVAETLATAYMENVPGMSMFGGGAWKDVWAFVLLILVLLL---RPQGILGSR 305


>gi|254712452|ref|ZP_05174263.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ceti M644/93/1]
 gi|254715525|ref|ZP_05177336.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ceti M13/05/1]
 gi|261217261|ref|ZP_05931542.1| inner-membrane translocator [Brucella ceti M13/05/1]
 gi|261320132|ref|ZP_05959329.1| inner-membrane translocator [Brucella ceti M644/93/1]
 gi|260922350|gb|EEX88918.1| inner-membrane translocator [Brucella ceti M13/05/1]
 gi|261292822|gb|EEX96318.1| inner-membrane translocator [Brucella ceti M644/93/1]
          Length = 332

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/278 (16%), Positives = 102/278 (36%), Gaps = 14/278 (5%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+  +  L +       L  +  ++    +G       +  +   I I  +    L +V 
Sbjct: 1   MTELTQPLPQTRHSYAGLIGIVAIIAASVVGWFLFPDNLALLTRVIAI-ALLVLSLDLVT 59

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           G  G+ +L     +  GAY   I  + +      L+  +  +     G++ G   L+  G
Sbjct: 60  GYCGIATLGHAALFGAGAYGAGIAAAHFGVTDPILMTVIGLLAGAVTGLVSGAVILRATG 119

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
               + ++ +  +F     K    T G  G+         G               F +Y
Sbjct: 120 MAQLVLSIAVVHLFHEAANKASGWTGGSDGLSGISPDPIFGI------------FEFDLY 167

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              +Y   + +  +S   + ++ R+      R ++++     ++  ++  A+L  + +S 
Sbjct: 168 GRTVYIYAVILLLISFIFLRYVVRSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISG 227

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           A  G+ GA  A S   +  D   F+ +   + +++LGG
Sbjct: 228 AVAGIGGALNAISTQVVGLDSLSFTMSAEALVMLVLGG 265


>gi|145589909|ref|YP_001156506.1| inner-membrane translocator [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048315|gb|ABP34942.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 311

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 97/305 (31%), Gaps = 6/305 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   IY + A G ++V G LG+++        IGA   + L          L   
Sbjct: 8   IINGLVLGSIYALIALGYTMVYGVLGIINFAHGEVLMIGAMVSLSLLRLILSWTSDLPGW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      +     L +  + +A   L  +     ++         +    +      
Sbjct: 68  LTLLIVLPVTMAVCAGLSYWIERIAYRPLRNAPRLAPLISAIGMSILLQTIAMMIWSRNP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +              S+          +++    +   ++  + +T +  A R   +  +
Sbjct: 128 MTYPQLLPSAPIELGSTGATITGKEIIIIVVALLVMCGLLFLVEKTKLGRAMRATAEQTQ 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           F +  A  G+AG   A++   +   M  F   +   +  +LGG+
Sbjct: 188 IAALMGVNPNRVISITFMLGGALAGLAGVMIASNYGNVHFYM-GFIPGLKAFTAAVLGGI 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L       A+L G++          +   L      +        + L LV+++R   
Sbjct: 247 GNLQ-----GAMLGGLLLGLIEALGAGYIGELTGGVFGSNYQDIFAFLVLILVLVLRPTG 301

Query: 339 LLRLR 343
           LL  +
Sbjct: 302 LLGEK 306


>gi|104783849|ref|YP_610347.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           entomophila L48]
 gi|95112836|emb|CAK17564.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas entomophila L48]
          Length = 260

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 78/255 (30%), Gaps = 22/255 (8%)

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
           + L +   +  + +++G  G  +   + K   +   +A LI +     IL  +  I+ G 
Sbjct: 22  FPLLMLGTLLFTVVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQGA 81

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
               V   L                 S FV       ++L+        +   ++ T + 
Sbjct: 82  RQQGVPTLLEGAWRVEVG--------SGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLG 133

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
              R  + ++K    L           F + +    +AG     +          F   I
Sbjct: 134 RMCRATQQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYA-GFIIGI 192

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              +  +LGG+ SL        IL     L  G+    +  +  F               
Sbjct: 193 KAFTAAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFS-------------L 239

Query: 328 LFLVILMRSHSLLRL 342
           L ++++ R   LL  
Sbjct: 240 LVMILIFRPQGLLGR 254


>gi|289672629|ref|ZP_06493519.1| inner-membrane translocator [Pseudomonas syringae pv. syringae FF5]
          Length = 288

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 60/185 (32%), Positives = 88/185 (47%), Gaps = 7/185 (3%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L++   +    + KYI ++ I  LIYV+   GL+IVVG  GLL L  V  YAIGAY
Sbjct: 104 IIPLLIVIAIVFPIFANKYILTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 163

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +     GL  W  +P++A+ +   G I+G P L+  GDYLAI TL   EI + +L  
Sbjct: 164 GLALGYQYLGLGFWSALPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 223

Query: 140 WKPITNGKAGIYVADRLYFLGTTVR-------SLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           W   T G  G+ V    +      R        +  +F F  +  +  IF+Y VL  +  
Sbjct: 224 WLSFTGGPNGVPVPAPTFLGLEFGRRAKDGGVPIHEYFGFDYNPDLKFIFIYAVLFLVVL 283

Query: 193 LSASI 197
                
Sbjct: 284 AVFFF 288


>gi|189022753|ref|YP_001932494.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus S19]
 gi|237817051|ref|ZP_04596043.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus str. 2308 A]
 gi|254698780|ref|ZP_05160608.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|254732225|ref|ZP_05190803.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus bv. 4 str. 292]
 gi|256262431|ref|ZP_05464963.1| branched-chain amino acid ABC transporter [Brucella melitensis bv.
           2 str. 63/9]
 gi|260544735|ref|ZP_05820556.1| branched-chain amino acid ABC transporter [Brucella abortus NCTC
           8038]
 gi|260760021|ref|ZP_05872369.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292]
 gi|260763260|ref|ZP_05875592.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59]
 gi|189021327|gb|ACD74048.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus S19]
 gi|237787864|gb|EEP62080.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus str. 2308 A]
 gi|260098006|gb|EEW81880.1| branched-chain amino acid ABC transporter [Brucella abortus NCTC
           8038]
 gi|260670339|gb|EEX57279.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292]
 gi|260673681|gb|EEX60502.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59]
 gi|263092166|gb|EEZ16463.1| branched-chain amino acid ABC transporter [Brucella melitensis bv.
           2 str. 63/9]
 gi|326410805|gb|ADZ67869.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella melitensis M28]
 gi|326554097|gb|ADZ88736.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella melitensis M5-90]
          Length = 332

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 105/278 (37%), Gaps = 14/278 (5%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+  +  L +       L  +  ++    +G       + ++  +I+   +    L +V 
Sbjct: 1   MTELTQPLPQTRHSYAGLIGIVAIIAASVVGWFLFPDNL-ALLTRIIAIALLVLSLDLVT 59

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           G  G+ +L     +  GAY   I  + +      L+  +  +     G++ G   L+  G
Sbjct: 60  GYCGIATLGHAALFGAGAYGAGIAAAHFGVTDPILMTVIGLLAGAVTGLVSGAVILRATG 119

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
               + ++ +  +F     K    T G  G+         G               F +Y
Sbjct: 120 LAQLVLSIAVVHLFHEAANKASGWTGGSDGLSGISPDPIFGI------------FEFDLY 167

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              +Y   + +  +S   + ++ R+      R ++++     ++  ++  A+L  + +S 
Sbjct: 168 GRTVYIYAVILLLISFIFLRYVVRSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISG 227

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           A  G++GA  A S   +  D   F+ +   + +++LGG
Sbjct: 228 AVAGISGALNAISTQVVGLDSLSFTMSAEALVMLVLGG 265


>gi|170719090|ref|YP_001783446.1| sugar ABC transporter permease [Haemophilus somnus 2336]
 gi|168827219|gb|ACA32590.1| Monosaccharide-transporting ATPase [Haemophilus somnus 2336]
          Length = 319

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 87/311 (27%), Gaps = 23/311 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++   ++ +      S   I ++  Q  I  + A G++ V+   G + L+     A
Sbjct: 17  VIALLILIAIVSMINPDFFSIDNILNILRQTSINAIIAVGMTFVILIAG-IDLSVGSILA 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L S       ++     + +    +   + +                + F  
Sbjct: 76  LTGAVAASLVSMELSIFMVIPLTLLLGTFLGSVSGFIVAK------------GKVQAFIA 123

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +          F      Y + +   +  M  + A
Sbjct: 124 TLVTMTLLRGVTMVYTEGRPISTGFSETAD-----SFAYLGTGYLLGIPLPIWLMVIVFA 178

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L+   I      +  N+ A       +   K+  FAVS     +AG    A    
Sbjct: 179 VAWYVLKHCKIGRYIYALGGNENATQLSGINVNRIKIFVFAVSGFLSALAGLIVTARLSS 238

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+     +GG   +        I+  +      ++   +  ++
Sbjct: 239 AQPTAGVSYELDAIAAVVVGGTSLMGGKGRVMGTLIGALIIGFLNNALNLLDVSSYYQMI 298

Query: 311 KFDCSFNMRHT 321
                  +   
Sbjct: 299 AKALVILIAVL 309


>gi|146342108|ref|YP_001207156.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. ORS278]
 gi|146194914|emb|CAL78939.1| conserved hypothetical protein; putative membrane protein; putative
           branched-chain amino acid ABC transport system permease
           protein [Bradyrhizobium sp. ORS278]
          Length = 345

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 116/299 (38%), Gaps = 15/299 (5%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
               ++ L +G     +Y+  +  +IL   +FA  L +++G  G++SL     + +GAY 
Sbjct: 24  FAFWIVVLAVGLAVPSRYL--IMTEILRLALFALSLDLILGYAGIVSLGHAAFFGVGAYC 81

Query: 81  YVILGSRYGLS-IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
             +L     ++   L + V+ + +   G       ++       + TL ++ + + +  +
Sbjct: 82  AGLLSVHGIINEPVLALIVAGLAATVLGFATSFLVIRGVDLTRLMVTLGIALLMEALAER 141

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           +  IT G  G+   D     G     +     F  S  +  +      + +         
Sbjct: 142 FSNITGGTDGLQGIDIQPIFGLFAFDMFGRTGFFYSLAVLFVLFLLARMIV--------- 192

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
               +    + R I++N     ++   +    ++ + V++ + G+AGA F  +    S D
Sbjct: 193 ---HSPFGLSLRAIKNNPLRASAIGIPVNKRLIAIYTVAAFYAGIAGALFTQTTALASLD 249

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           +F F  +  ++ ++++GG   L       A+   + EL   +   Y+   +       +
Sbjct: 250 VFSFERSADLVLLLVIGGSGYLYGGLIGAAVFRMLQELFQWITPQYWMFWIGLVLVVIV 308


>gi|46581147|ref|YP_011955.1| high-affinity branched-chain amino acid ABC ransporter, permease
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120601613|ref|YP_966013.1| inner-membrane translocator [Desulfovibrio vulgaris DP4]
 gi|46450568|gb|AAS97215.1| high-affinity branched-chain amino acid ABC ransporter, permease
           protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|120561842|gb|ABM27586.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311234823|gb|ADP87677.1| inner-membrane translocator [Desulfovibrio vulgaris RCH1]
          Length = 306

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 95/297 (31%), Gaps = 4/297 (1%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           + I +       Y + A G ++V G L L++      + +GAY    + S     I    
Sbjct: 6   QNIFNALQWGSFYALIALGYTLVYGVLLLINFAHGDIFMVGAYISFFVASILLGQIGGFF 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLA---IATLIMSEIFQNILIKWKPITNGKAGIYVA 153
            +S  ++ A  + + +      G  L       L      +  ++    +          
Sbjct: 66  ELSGPMALALTVPLTMVLTAGVGVTLERVAYRPLRRKGAHRLYVVITALMCGIMLENGNL 125

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             L      +  +I    +    V        V++    + A +   + RT I  A R +
Sbjct: 126 ALLGASRKALPEMIDKVVYTIGTVSVTNLKLMVIVTAFLVFALLQFIVTRTRIGMAMRAV 185

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             ++ A   +   +    +  F + S F G+AG  FA S   + P M         I+ V
Sbjct: 186 AWDKFALPLMGIPLDSIIVFTFVLGSGFAGLAGLLFAMSYPILDPYMGAMVGWKAFIAAV 245

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           + GG+  +        +L  +  +   +    F  L  F     +       +    
Sbjct: 246 V-GGIGDIRGAFIGGFLLAFIEIMVAAVFPSTFRDLFAFSILLFIMWQRPTGLFGVA 301


>gi|325523243|gb|EGD01609.1| branched-chain amino acid transporter permease [Burkholderia sp.
           TJI49]
          Length = 264

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 100/287 (34%), Gaps = 26/287 (9%)

Query: 55  GLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
           GL+++ G L +++      + +GA    +  S +GL  W ++ ++ +I GA G+++    
Sbjct: 1   GLAVIFGLLNVINFAHGALFMLGAMLAWMGLSYFGLPYWAMLVLAPLIVGAFGILVERSM 60

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
           L++      +  L+++     ++        G +G          G T            
Sbjct: 61  LRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYGSSGQPYDVPSQLSGAT----------NL 110

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
            F+    +  +V++    +  +    + +T +    R   +N K   +    +       
Sbjct: 111 GFMFLPNYRAWVVVASLAVCLATWFVIEKTRLGAYLRAGTENPKLVEAFGVNVPMMITLT 170

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           +    A    AG   A         +      I V ++V++GGM S+        +L  +
Sbjct: 171 YGFGVALAAFAGVLAAPVIQV--SPLMGQPMIITVFAVVVIGGMGSILGSIVTGLLLGVI 228

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                                +     T++ + + +V+L+R   L  
Sbjct: 229 EGFTRVF--------------YPEASATVVFVIMAIVLLIRPAGLFG 261


>gi|212223304|ref|YP_002306540.1| hypothetical branched-chain amino acid transport ATP-binding
           protein livM [Thermococcus onnurineus NA1]
 gi|212008261|gb|ACJ15643.1| hypothetical branched-chain amino acid transport ATP-binding
           protein livM [Thermococcus onnurineus NA1]
          Length = 342

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 100/323 (30%), Gaps = 20/323 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           +  + + I IY +    L+I  G  G+ +     A  IGA       +R  +++      
Sbjct: 6   LQLILVWIGIYAVVNISLNIEYGYTGIPNFGRHFAVLIGAIMLGGAVNRILMAMLRIDGD 65

Query: 94  -------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI--- 143
                  L+   +++ +      +          +L  A L    I  +  +K   +   
Sbjct: 66  LITGTTDLVFKANSLFAVHPIYGLVYFFGSLTLAFLFGALLGALFILPSARLKGDYLGMT 125

Query: 144 ---TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
                    +        +G    + +       S    E     ++L +  L       
Sbjct: 126 LLAIGEVTFLLAYYTPSLMGGYYGTAVPDPLAFLSGSNREWVFIGLVLLVMVLVFIFAEK 185

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS-RDRISPD 259
           L  T      +  R+N++   +    ++  ++ A  + S    + G  +     + IS  
Sbjct: 186 LLNTPFGRLLKAHRENEEVVKAFGRDVMRIRIKASIIGSGIAALGGVLYGFHALNLISSA 245

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
             +         +++LGG  +   +   TAI + +  L      +    LL         
Sbjct: 246 FTRIEWAFYPFIMILLGGRGNNRGVLLGTAIFVTLKVLIETY-KFQLVQLLHIPFEPVWL 304

Query: 320 HTTLMVIALFLVILMRSHSLLRL 342
              L  +   L+I  R   L+R 
Sbjct: 305 EYILFGVLALLIIYYRPEGLIRE 327


>gi|33595108|ref|NP_882751.1| putative branched-chain amino acid transport permease [Bordetella
           parapertussis 12822]
 gi|33599390|ref|NP_886950.1| putative branched-chain amino acid transport permease [Bordetella
           bronchiseptica RB50]
 gi|33565185|emb|CAE35983.1| putative branched-chain amino acid transport permease [Bordetella
           parapertussis]
 gi|33566986|emb|CAE30899.1| putative branched-chain amino acid transport permease [Bordetella
           bronchiseptica RB50]
          Length = 293

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 93/305 (30%), Gaps = 23/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   IY +   GL+++ G L +++        +GAY    L    G+   L +P+
Sbjct: 9   LVNGLILGAIYGLIGVGLNVIFGVLRVVNFAHGEFLVLGAYFAYYLLEYAGIGPLLALPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G ++    +             +  +F   ++          G  +      
Sbjct: 69  AFGAFFLAGYVLYFVLIPRLSKADDPEISSLLLMFGVSIM---------LGAIMLLAFEA 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              ++   I    F    V+        L     + A +  +L RT +  A R I  N+ 
Sbjct: 120 DARSLPYEIEPVFFKIGPVLIPTVRLIALAIALAVVAVLAWFLYRTQMGKALRAIIMNRD 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +          AF +      + G   A      SP M      +I   +++LGG+
Sbjct: 180 AVRIVGINAERLSAVAFGLGIGLAAVTGVLVAMVFPAFSPFM-GNDYTLIGFIVIVLGGL 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                      +     ++          ++  F             + +  +I +R   
Sbjct: 239 GHPVGALVGAMLFGVTEQVSVVFFNPSIATICGF-------------VLMVAMIFVRPTG 285

Query: 339 LLRLR 343
           L   R
Sbjct: 286 LFGHR 290


>gi|121609676|ref|YP_997483.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121554316|gb|ABM58465.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 304

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 84/296 (28%), Gaps = 13/296 (4%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           +Y + A G  ++  + G+ +          A + V L  +       +I    ++     
Sbjct: 17  MYSLVALGFVLIYKASGVFNFAQGAMVYFAALAVVGLMDKGLPMWAAIIGSFMVMILLAI 76

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
               L   K          +          I       G   +     +  +   +    
Sbjct: 77  ATERLVLRKLVNQPPITLFMAT--------IGLAFFLEGLGPLLFGIEVRAIDLGIVDEP 128

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                    +    F  +    +  L A + L+ +RT +  A R + D+ +A  SL   +
Sbjct: 129 IMPIMDRLGIGISKFDLFASGTVIALVALLALFFQRTKLGRALRAVADDHQAALSLGIPL 188

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
                  + V+     +AG  + +               +  + ++ILGG TS+      
Sbjct: 189 QHIWAVVWGVAGFVALVAGLLWGSRNGVQFALTMT---ALKALPVLILGGFTSIPGAIVG 245

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
             I+    +L               +          +   L   +L+R   L   R
Sbjct: 246 GLIIGASEKLAEIYIPPVLQGAFDGNFGGIEGWFPYVFALL--FLLVRPEGLFGER 299


>gi|219883373|ref|YP_002478534.1| Monosaccharide-transporting ATPase [Arthrobacter chlorophenolicus
           A6]
 gi|219862218|gb|ACL42558.1| Monosaccharide-transporting ATPase [Arthrobacter chlorophenolicus
           A6]
          Length = 348

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 94/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ +    L+ +      S   + ++   I I  + A G++ V+ + G + L+     
Sbjct: 36  ILVVLIALVALMVVIAPNFASVNNLLNIARSISINAILAAGMTFVILAAG-IDLSVGSIL 94

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+   + V+ G     +         ++ G     +          YLA+A  I++    
Sbjct: 95  AVAGVASVMTGIAGLPAPVA------ILVGVLTGALAGLINGLLSSYLALAAFIVTLGTM 148

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L           G  +              I     P   ++      + +L      
Sbjct: 149 TFLRGLAYTM--TDGQPIVSNTLNFRDIGNGYIAGIPVPVVIMVIVYVAAWFVL------ 200

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                   RT        +  N +A       +     S + ++    G+AG  F+A   
Sbjct: 201 -------ERTRYGRHVYAVGGNAEAARLAGINVKRVLTSVYVIAGVCAGLAGVIFSARVV 253

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++V     ++GG   +      + IL  +      MN  +F  L
Sbjct: 254 SAQPTAGGGYELDAIAAVVLGGTSLVGGRGRIYGTLIGSIILGVLSTGLILMNVQFFTQL 313

Query: 310 LKFDCSFNMRHTT 322
           L       +    
Sbjct: 314 LIKGLVIILAVAI 326


>gi|297583220|ref|YP_003699000.1| inner-membrane translocator [Bacillus selenitireducens MLS10]
 gi|297141677|gb|ADH98434.1| inner-membrane translocator [Bacillus selenitireducens MLS10]
          Length = 314

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 87/297 (29%), Gaps = 25/297 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            A  S   + ++  Q+ I  + A+G++ V+   G + L+     A+       L +    
Sbjct: 32  PAFLSPNNLMNVLRQVSINALIAFGMTFVI-LTGGIDLSVGSILALSGAVTATLMASGVD 90

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            +  ++      +        + +         IATL    IF+ + + +          
Sbjct: 91  PVLSVLIGLLAGAALGAFNGIIIAKG--KVAPFIATLATMTIFRGLTLVFTD-------- 140

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                    G  V  L     F      Y   +    + M      + L L++T      
Sbjct: 141 ---------GRPVSGLGDSTFFDMLGRGYLFGIPVPAVTMMVSFLVLYLILKKTTFGRRV 191

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N++A           K+  ++++     +AG    +      P   +  E   + 
Sbjct: 192 YAVGGNEEAAVLSGINADRVKIYVYSLTGFLAALAGTILTSRLSSAQPTAGQMYELDAIA 251

Query: 271 SIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           ++V     + GG   +        I+  +      +    F   +       +    
Sbjct: 252 AVVLGGTSLTGGRGWIVGTLIGALIIGVLNNGLNLLGVSSFFQQVVKGSVILLAVLL 308


>gi|120611597|ref|YP_971275.1| inner-membrane translocator [Acidovorax citrulli AAC00-1]
 gi|120590061|gb|ABM33501.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 317

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 52/320 (16%), Positives = 115/320 (35%), Gaps = 27/320 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M + GL+++   +G+L+      Y +GAY          +  W  + +
Sbjct: 10  LLNGLSYGLLLFMLSSGLTLIFSMMGVLNFAHTSFYMLGAYFAY--SISGVVGFWPALVI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +  GA G      +L+    +  +  L+++     ++++   +  G            
Sbjct: 68  APLAVGALGAAFERYALRRVHKFGHVPELLVTFGLSYLILEVVQLVWG---------RST 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + S ++   F      +     +V+L    +  S+ L L RT I    +      +
Sbjct: 119 VPYGLPSQLQGPLFTLYGTQFPKSRSFVMLVALLMLLSVWLVLTRTRIGLVIQAALKQPE 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    +  F    A  G+AG         ++      S   I+  +V++GGM
Sbjct: 179 MVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NTYVTEPAMAASVGSIIFVVVVVGGM 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSL--------------LKFDCSFNMRHTTLM 324
            SL+    A+ I+  V      +++   ++L                   + +     L 
Sbjct: 237 GSLAGAFLASLIIGLVQTFAVALDYSLADALRTAGMAVTEQTFGYPLLKLTISQVAPILP 296

Query: 325 VIALFLVILMRSHSLLRLRT 344
            + L L+++ R   LL  R 
Sbjct: 297 YLFLVLILIFRPKGLLGTRE 316


>gi|332560905|ref|ZP_08415223.1| ABC branched-chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides WS8N]
 gi|332274703|gb|EGJ20019.1| ABC branched-chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides WS8N]
          Length = 295

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 110/318 (34%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           ++  L +        +    I    Y + + GL+++ G L +++      Y  GA++ ++
Sbjct: 1   MMTILGIPTAALFGQLLVGLINGSFYALLSLGLAVIFGLLRVINFAHGAQYMAGAFAALL 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L ++ G+  W  + ++ +I G  G ++    L        +  L+ +      L      
Sbjct: 61  LLTQTGIGYWPALILAPLIVGLGGALIERTMLSRLYKLDPLYGLLFTFGLALTLEGTFRW 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G +G   +      G               F+   I+  +V++    +   + L + +
Sbjct: 121 FFGTSGQPYSPPAALTGA----------VNLGFMFLPIYRGWVVVASLAVCLGVWLLIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N     S    +       + + +A  G AG   A         +   
Sbjct: 171 TKLGAYLRAATENPVLVQSFGVNVPLLLTFTYGLGAALAGFAGVLAAPVYQV--SPLMGS 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  I+V ++V++GGM S+        +L     L                  +      +
Sbjct: 229 NLIIVVFAVVVVGGMGSILGAIVTGYLLGIAEGLTKVF--------------YPEASNIV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           + + + +V+++R   L  
Sbjct: 275 IFVIMAIVLILRPAGLFG 292


>gi|331002571|ref|ZP_08326087.1| hypothetical protein HMPREF0491_00949 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330408299|gb|EGG87775.1| hypothetical protein HMPREF0491_00949 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 331

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 98/301 (32%), Gaps = 18/301 (5%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F  +   Y  ++ ++ V   + +        S   I ++   +    + A G+++++  L
Sbjct: 14  FLKQFQSYIALIIIVVVATLINIKDGENVFLSVPNIMNVLRAVSETGIIAIGMTMIL-IL 72

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+      + +     L  R GL ++  + +S +I G  G+  GL   K +     
Sbjct: 73  GDIDLSVGSIVGLVSTGCASLMVRNGLGMFPAVLLSLLIGGLYGLFNGLCVTKLKLQAFI 132

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
             TL    I + +   W             +        +     F   P+  +I+   +
Sbjct: 133 -VTLASMNIARGLARFWSNGVGIPLAYGEGEGFAPPAFGLLQEKAFGVIPAPVIIFISLL 191

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
                 +            +T+       I  N+ A +     +   K+ AF + S    
Sbjct: 192 LIFQCVLS-----------KTSFGRKVYAIGGNKNASYLAGIPVDRIKIIAFVLCSMLSA 240

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +A    AA   +  P+     E   V +  I      GG  ++        IL  +  + 
Sbjct: 241 VAAMIHAAQISQGGPNEGIGYELNAVAACAIGGTSLAGGKGTMIGTLVGAVILGLLDNVL 300

Query: 299 C 299
            
Sbjct: 301 G 301


>gi|89900623|ref|YP_523094.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89345360|gb|ABD69563.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 296

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/284 (12%), Positives = 77/284 (27%), Gaps = 8/284 (2%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               +IY + A+G  +   + G L+     +  +GA   + L        +L   +   +
Sbjct: 12  IALGMIYGVIAFGYQLTFATSGTLNFGQGESLMLGALVGLSLVGTIHGGPYLNYWLMIPL 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G   G                    I   I +        +               
Sbjct: 72  VALFGAAQGAFVEWIGVRPAIKIKSEFGWIMSTIALAIIFKNVAENIW------GKDDLK 125

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             S +                  V++G   + A + L+ R++    A     +++ A   
Sbjct: 126 FPSPLPEAPIKFLGANVLPMEIVVVIGALAMMAMVELFNRKSIYGKAVVATSNDRDAASL 185

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +          ++A+SS    +AG   A     ++         +   ++ I+GG+TS  
Sbjct: 186 MGINTGAVITFSYALSSVTAAVAGVLVAPL--TLTGATMGSVLGLKAFAVAIIGGLTSGV 243

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            +     IL              +  +        +       +
Sbjct: 244 GVIVGGLILGIAETTTGYYISTGYKDVPGLVLLLLVLAIKPAGL 287


>gi|313892580|ref|ZP_07826167.1| ribose transport system permease protein RbsC [Dialister
           microaerophilus UPII 345-E]
 gi|329121185|ref|ZP_08249813.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Dialister micraerophilus DSM 19965]
 gi|313118977|gb|EFR42182.1| ribose transport system permease protein RbsC [Dialister
           microaerophilus UPII 345-E]
 gi|327470267|gb|EGF15728.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Dialister micraerophilus DSM 19965]
          Length = 312

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 93/313 (29%), Gaps = 27/313 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +++ +   +      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 16  LIGLVILFIVIAILNDSFIDPSNLKNLARQVSINALIAFGMTFVI-LTGGIDLSVGSILA 74

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +I  + + +    +   + S                  F  
Sbjct: 75  LSSALMASMIASGTNPQMAIIYSAIIGTILGIINGIIVSY------------GKVAPFIA 122

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L                + +  L            F     +  I M    L       
Sbjct: 123 TLATMTIYRGSTLVYTNGNPISGLTNDPVFTAFGQGFLLEVPVPAIVMIIAFL------- 175

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++  L +T +      +  N+K  F     I   K+ A+A++     +AGA   A  + 
Sbjct: 176 ILLFVLNKTPLGRQTYAVGGNEKVSFISGIKIDKIKIFAYALTGCLCAIAGAILTARLNS 235

Query: 256 ISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             P        +  I+ V+LGG         +S       I+  +      +N   F   
Sbjct: 236 AQPTA-GMGYELDAIAAVVLGGTSLSGGKGKISGTLIGALIIGTLNNGLNILNVSSFYQQ 294

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 295 VVKGIVILLAVIM 307


>gi|282856338|ref|ZP_06265618.1| inner-membrane translocator [Pyramidobacter piscolens W5455]
 gi|282585841|gb|EFB91129.1| inner-membrane translocator [Pyramidobacter piscolens W5455]
          Length = 317

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/319 (12%), Positives = 89/319 (27%), Gaps = 30/319 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G S+V   L   +        +G Y    + +  G+++W     
Sbjct: 8   VVNGLSLGSVYALIAVGYSLVYSILLFSNFAHGGFLVVGGYVAYGMLNAMGMNVWAAGAG 67

Query: 99  SAMISGACGMIMGLPSLKFRGD------YLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           + + +G   ++    + +   +      YL IA++ +S + +NI +              
Sbjct: 68  AILAAGVVAIVTERMAYRPIRERTSATLYLLIASMGVSIVIENIFVVTIGGRYRALPEVF 127

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSF---------VIYEIFMYYVLLGMCFLSASIILWLRR 203
             +   L                          +    F    L         + ++L R
Sbjct: 128 PAQPIVLAARAVGEAGEAALRFFPGAAEGLTPLLTISAFDLVSLGVTVVFLLLLQMFLMR 187

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T    A R    + +    +   +       F V+ A   + G F A             
Sbjct: 188 TRWGLAIRAAACDLRTAGLMGVNVNLLIAIVFFVAGALAAVGGIFLATRYTL--YPQLGN 245

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
                     ++GG+ SL        +L     L  G                +     +
Sbjct: 246 MITTKAFVAAVIGGLGSLPGAVIGGILLGLAEMLTAGFIS-------------SQMRDFV 292

Query: 324 MVIALFLVILMRSHSLLRL 342
           +   L   ++++   L   
Sbjct: 293 VFALLIATLIIKPSGLFGR 311


>gi|218533211|ref|YP_002424027.1| inner-membrane translocator [Methylobacterium chloromethanicum CM4]
 gi|218525514|gb|ACK86099.1| inner-membrane translocator [Methylobacterium chloromethanicum CM4]
          Length = 289

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 88/306 (28%), Gaps = 26/306 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             + S      +Y + A G  I     G ++     A  +GA        + G  + L +
Sbjct: 4   STLVSGLGLGSMYGLVALGFHITFAVSGTVNFAQGSAVTLGAVLGYTFAVQLGWPMPLAV 63

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             S       G+ +    ++      + A L+ +     IL      T G          
Sbjct: 64  AASLAGCALLGLAVERLLVRPFVVRGSDAWLLATVAGGIILDNVLLFTFG---------- 113

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                ++ S +                  + +     + +I    R T +      +  N
Sbjct: 114 -KEPRSLPSALVAAPVQVLGAGVYPLQLLIPVVGIAAAVAIRAVFRGTELGRVLLAVAQN 172

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   +   +      AFA+S+   G AG   A                I   ++ ILG
Sbjct: 173 SEAARLMGIDVARTVACAFALSAVLAGAAGLLIAPLFSV--SAEMGALFGIKAFAVAILG 230

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S + +  A  +   V                      +     ++   + L + +R 
Sbjct: 231 GIGSATGVVLAGLLYGLVEAGVTATLG-------------SGATQIVVFSVIILALALRP 277

Query: 337 HSLLRL 342
           + LL  
Sbjct: 278 NGLLGR 283


>gi|154250145|ref|YP_001410970.1| inner-membrane translocator [Fervidobacterium nodosum Rt17-B1]
 gi|154154081|gb|ABS61313.1| inner-membrane translocator [Fervidobacterium nodosum Rt17-B1]
          Length = 303

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 95/300 (31%), Gaps = 7/300 (2%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
              T   + + +  +   +Y + A G ++V G L L++        +G Y      +   
Sbjct: 3   FNFTIFIQNLLNGLMVGGLYALIAVGYTMVYGILRLINFAFGDVMVMGIYFAFYGATLIR 62

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
            S  L +  S +++   G+++   + K   +   I+ LI +      +  +  +  G   
Sbjct: 63  FSFPLAVAFSLLVTAILGVLIDRLAYKPLRNAPRISALITAIGVSFFIESFAVVFFGPNY 122

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
               + L        S      F    V     ++ +L        ++ L + +T +  A
Sbjct: 123 KAFLEALENKTIAFES------FIIGGVYLPKIIFIILGITAVALVTLFLIVYKTKMGMA 176

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R I  +      +   +       FA+SSA   +AG  +A       P    F   +  
Sbjct: 177 MRAISADIPTTSLMGINVDNVIGFTFAISSALAALAGVMWALRYPSFYPYT-GFVPGLKA 235

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
               + GG+ S+        +L  +  +              F     +    +    L 
Sbjct: 236 FIAAVFGGIGSIGGAVLGGILLGILEMMIITFFPTLMQYKDAFAFIILIVILLIRPAGLL 295


>gi|293390610|ref|ZP_06634944.1| ribose ABC transporter permease protein [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951144|gb|EFE01263.1| ribose ABC transporter permease protein [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 321

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 87/311 (27%), Gaps = 23/311 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        S   I ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 19  IIALLVLIGVVSAINPDFFSVDNILNILRQTSVNAIIAVGMTFVILIAG-IDLSVGSILA 77

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +       + ++  V  + +   G+   + +                + F  
Sbjct: 78  LTGAFAASMVGAELPVLLIIPLVLLIGTLLGGISGVIVAK------------GKVQAFIA 125

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +       F      FVI        ++ +     
Sbjct: 126 TLVTMTLLRGVTMVYTDGRPISTGFSDTADAFTFLGTGYLFVIPLPIWLMAIVFLVSWYV 185

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                 + T I      +  N+ A       +   K+  FAVS     +AG    +    
Sbjct: 186 L-----KHTKIGRYIYALGGNEAATRLSGINVNKVKIFVFAVSGFLSSLAGLIVTSRLSS 240

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+     +GG   +        I+  +      ++   +  ++
Sbjct: 241 AQPTAGVSYELDAIAAVVVGGTSLMGGKGRVMGTLIGALIIGFLNNALNLLDISSYYQMI 300

Query: 311 KFDCSFNMRHT 321
                  +   
Sbjct: 301 AKALVILIAVL 311


>gi|254705858|ref|ZP_05167686.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella pinnipedialis M163/99/10]
 gi|261313287|ref|ZP_05952484.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10]
 gi|261302313|gb|EEY05810.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10]
          Length = 332

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 104/278 (37%), Gaps = 14/278 (5%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+  +  L +       L  +  ++    +G       + ++  +I+   +    L +V 
Sbjct: 1   MTELTQPLPQTRHSYAGLIGIVAIIAASVVGWFLFPDNL-ALLTRIIAIALLVLSLDLVT 59

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           G  G+ +L     +  GAY   I  + +      L+  +  +     G++ G   L+  G
Sbjct: 60  GYCGIATLGHAALFGAGAYGAGIAAAHFGVTDPILMTVIGLLAGAVTGLVSGAVILRATG 119

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
               + ++ +  +F     K    T G  G+         G               F +Y
Sbjct: 120 LAQLVLSIAVVHLFHEAANKASGWTGGSDGLSGISPDPIFGI------------FEFDLY 167

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              +Y   + +  +S   + ++ R+      R ++++     ++  ++  A+L  + +S 
Sbjct: 168 GRTVYIYAVILLLISFIFLRYVVRSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISG 227

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           A  G+ GA  A S   +  D   F+ +   + +++LGG
Sbjct: 228 AVAGIGGALNAISTQVVGLDSLSFTMSAEALVMLVLGG 265


>gi|114707761|ref|ZP_01440655.1| putative branched-chain amino acid transport permease [Fulvimarina
           pelagi HTCC2506]
 gi|114536750|gb|EAU39880.1| putative branched-chain amino acid transport permease [Fulvimarina
           pelagi HTCC2506]
          Length = 300

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 100/312 (32%), Gaps = 26/312 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI----WLL 95
            +  I    Y + A GL+++ G L +++      Y +G Y+Y +  +  G+       + 
Sbjct: 11  INGLIIGSFYALTALGLAVIFGVLRIVNFAHGELYMLGGYAYYLAIASLGIPPLAAILIA 70

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +    +I  A   ++  P    + D      ++++      L+       G         
Sbjct: 71  VAALFVIGAAIEGLLIRPIHTGKIDRPDEYAIMITFALSVFLLNLANSVFGP-------- 122

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                      +   R     +I              + A ++  LR T    A R +  
Sbjct: 123 ----WPQRPEPLMRGRVEIGELIISGDRLAAASAAIVMIAIVVFALRYTWAGKAVRAVSQ 178

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +++A      ++  A L AF   +A  G+AGA      + +          I    IV+L
Sbjct: 179 DRQAAEIYGISVQRAGLIAFGTGAALAGLAGALIGPVFNVVPI--MGVVPVIKAYIIVVL 236

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ S+        IL  V      +      +L   D    +    ++++        R
Sbjct: 237 GGLGSIPGAIIGAIILGQVESFATILIPDPSRALAYKDAYGLIVLVAVLLL--------R 288

Query: 336 SHSLLRLRTPSN 347
              L   +    
Sbjct: 289 PQGLFGTKDRRA 300


>gi|17988464|ref|NP_541097.1| high-affinity branched-chain amino acid transport system permease
           protein LIVM / high-affinity branched-chain amino acid
           transport ATP-binding protein LIVG [Brucella melitensis
           bv. 1 str. 16M]
 gi|256042904|ref|ZP_05445850.1| high-affinity branched-chain amino acid transport system permease
           protein LIVM / high-affinity branched-chain amino acid
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|256112133|ref|ZP_05453061.1| high-affinity branched-chain amino acid transport system permease
           protein LIVM / high-affinity branched-chain amino acid
           [Brucella melitensis bv. 3 str. Ether]
 gi|256261943|ref|ZP_05464475.1| branched-chain amino acid ABC transporter [Brucella melitensis bv.
           2 str. 63/9]
 gi|260564138|ref|ZP_05834623.1| branched-chain amino acid ABC transporter [Brucella melitensis bv.
           1 str. 16M]
 gi|265989337|ref|ZP_06101894.1| branched-chain amino acid ABC transporter ATP-binding/permease
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|265993564|ref|ZP_06106121.1| predicted protein [Brucella melitensis bv. 3 str. Ether]
 gi|17984251|gb|AAL53361.1| high-affinity branched-chain amino acid transport system permease
           protein livm / high-affinity branched-chain amino acid
           transport ATP-binding protein livg [Brucella melitensis
           bv. 1 str. 16M]
 gi|260151781|gb|EEW86874.1| branched-chain amino acid ABC transporter [Brucella melitensis bv.
           1 str. 16M]
 gi|262764434|gb|EEZ10466.1| predicted protein [Brucella melitensis bv. 3 str. Ether]
 gi|263000006|gb|EEZ12696.1| branched-chain amino acid ABC transporter ATP-binding/permease
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|263091424|gb|EEZ15960.1| branched-chain amino acid ABC transporter [Brucella melitensis bv.
           2 str. 63/9]
 gi|326411344|gb|ADZ68408.1| branched-chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella melitensis M28]
 gi|326554633|gb|ADZ89272.1| branched-chain amino acid ABC transporter, ATP-binding/permease
           protein [Brucella melitensis M5-90]
          Length = 515

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 98/256 (38%), Gaps = 21/256 (8%)

Query: 65  LLSLNCVIAYAIGAY-SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           ++SL  +    +GA+ +  +        + + + +  + +   G+ +GLP+L+ RG  LA
Sbjct: 1   MISLCQMSFAGVGAWVTGYLNLIEAPGGLAVWVLLGGLAAVPVGIAIGLPALRLRGINLA 60

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           I TL  +  F  +L        G+       R     +                      
Sbjct: 61  IVTLSFAAAFDTVLATITFP--GQTSFTQVARPDLFASDRG------------------Y 100

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           +  +L    + A ++ ++  + +  +W  +R +++A  +   +I  AKLSAFA+S+   G
Sbjct: 101 FLFVLLAYGIIAVVLEFISHSRLGASWLAVRHSERAAAANGISIPRAKLSAFAISAFISG 160

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           ++G   A     +  + F   +++ + ++  + G            +++   EL   +N 
Sbjct: 161 ISGGLLAGYLGTLVAENFSMMQSLALFAVATMAGAHFTLGALIGGVLIVLFPELLRRLNL 220

Query: 304 YYFNSLLKFDCSFNMR 319
                 + F       
Sbjct: 221 PQDIGNVFFALGAVQA 236


>gi|188591021|ref|YP_001795621.1| branched-chain amino acid ABC transporter permease [Cupriavidus
           taiwanensis LMG 19424]
 gi|170937915|emb|CAP62899.1| putative branched-chain amino acid transport system permease,
           membrane component [Cupriavidus taiwanensis LMG 19424]
          Length = 304

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/296 (13%), Positives = 86/296 (29%), Gaps = 13/296 (4%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           +Y + A G  ++  + G+ +          A + V L  +       +I    ++     
Sbjct: 17  MYSLVALGFVLIYKASGVFNFAQGAMVYFAALAVVGLMDKGMPMWAAVIGAFVVMILVGM 76

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
                   K          +          I       G   +   + +  +   +    
Sbjct: 77  STERFVLRKLVNQPPITLFMAT--------IGLSFFLEGLGPLLFGNEVRPINLGIVDEP 128

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                 +  ++   F          L  S+ L+ + T +  A R + D+ +A  SL   +
Sbjct: 129 IESILTTFNIVISKFDLAAAAIAGVLVGSLALFFQYTKVGRALRAVADDHQAALSLGIPL 188

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
                  + V+     +AG  + +               +  + ++ILGG TS+      
Sbjct: 189 QNIWAIVWGVAGFVALVAGMLWGSRN---GVQFALTLTALKALPVLILGGFTSVPGAIVG 245

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
             I+    +L        F S+   +          +   L   +L+R   L   +
Sbjct: 246 GLIIGASEKLAEIYIPPVFQSMFGGNFGGIEGWFPYVFALL--FLLVRPEGLFGEK 299


>gi|326330321|ref|ZP_08196631.1| urea ABC transporter, permease protein UrtB [Nocardioidaceae
           bacterium Broad-1]
 gi|325951858|gb|EGD43888.1| urea ABC transporter, permease protein UrtB [Nocardioidaceae
           bacterium Broad-1]
          Length = 294

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 97/292 (33%), Gaps = 25/292 (8%)

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSL 115
           ++  G +G++++        GAY+  ++ +      + LLI + A       + + L + 
Sbjct: 26  TLTFGQMGVINMAHGEFIMAGAYTAYVVSTIVASTELSLLIALPAGFVIGGLLGLALEAS 85

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
             R  Y      ++      ++++        A         +L             P  
Sbjct: 86  VLRWMYARPLDTLLVTYGVGLVLQQVARDIFGAPAKEVPAPGWLDG---------SIPIL 136

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
              + +   ++L+      A+++  LR TA+    R    N+    ++  +      + F
Sbjct: 137 GYDFPLTRLFILVLAAVCVAALLAVLRFTALGRQIRATVGNRDLAETIGISTRRTDQATF 196

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            + S   G+AG   A +    +      S  +    +V++GG+  L     A   +  + 
Sbjct: 197 FIGSGLAGVAGV--ALTLLGSTGPNLGTSYIVQAFLVVVVGGIGHLKGTIAAALGIGLLQ 254

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                                      ++ +A+   + +R   +L +RT S 
Sbjct: 255 AFLA-------------HALTGSVAQVIVFLAIVAFLQLRPQGILSVRTRSL 293


>gi|116694751|ref|YP_728962.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113529250|emb|CAJ95597.1| ABC-type transporter, permease component: HAAT family [Ralstonia
           eutropha H16]
          Length = 294

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 111/315 (35%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y + + GL+++ G L +++      + +GA    +  +
Sbjct: 3   LFGVPLPALLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAVLAWMGLN 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL+ WL++ ++ +++GA G+++    L+    +  +  L+++     ++        G
Sbjct: 63  YLGLNYWLMLVLAPVLAGALGVVLERTMLRHLYRFDHLYGLLLTLGICLLIEGALRSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+         G +             F++   +  +V+L    +  +    + +T +
Sbjct: 123 VSGLPYPTPEGLSGVS----------QLGFMVLPNYRAWVVLASLAVCFATWFMIEKTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N +   +    +       +A       +AG   A         +   +  
Sbjct: 173 GAYLRAGTENPRMVEAFGVNVPLLVTLTYAFGVGLAALAGVLAAPVMQV--SPLMGQNLI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+         L     +                  +     T++ +
Sbjct: 231 ITVFAVVVIGGMGSILGSIFTGLGLGVFEGITKVY--------------YPEASATVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
           A+  V+L+R   L  
Sbjct: 277 AMVCVLLVRPAGLFG 291


>gi|39934809|ref|NP_947085.1| branched chain amino acid ABC transporter permease
           [Rhodopseudomonas palustris CGA009]
 gi|192290333|ref|YP_001990938.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|39648659|emb|CAE27181.1| possible branched-chain amino acid transport system permease
           protein [Rhodopseudomonas palustris CGA009]
 gi|192284082|gb|ACF00463.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 291

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 92/305 (30%), Gaps = 20/305 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G +++ G  G+L+L+        A +     S +G+  +    +
Sbjct: 7   LIDGFAISALYALGATGFTLIFGVSGVLNLSHGAIMVAAAVAAWAASSTFGIGSYAGALI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +    ++     ++       IA        + I +    +  G          + 
Sbjct: 67  GIATALVIALLTYFAVVQPIQRSRRIA-----NEEKEIFVLTGTLLWGIMIQEAIAYFFT 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I         V       +  L  C + A + L + RT I  A      N +
Sbjct: 122 NNAKTVLPIVTGVVEILGVRTPRNEIFTALVCCLVIALLWLLVNRTKIGKAVLAASMNPR 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +    +  + +     G+AG          S  +   +      SIV+LGG+
Sbjct: 182 GVTLLGLELTNIYVVVWIIYGVLAGIAGVLLGMFLGVSSYSVGPLT--ASAFSIVVLGGL 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+S    A  ++  +      M                   +   ++ L  V+ +R   
Sbjct: 240 GSVSGSLIAAFVVGYLETFTAYMIS-------------PAYRSIPALLLLVTVMYLRPQG 286

Query: 339 LLRLR 343
           LL  R
Sbjct: 287 LLGRR 291


>gi|152977882|ref|YP_001343511.1| ribose ABC transporter permease protein [Actinobacillus
           succinogenes 130Z]
 gi|150839605|gb|ABR73576.1| Monosaccharide-transporting ATPase [Actinobacillus succinogenes
           130Z]
          Length = 322

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 87/311 (27%), Gaps = 23/311 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   I ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 19  IVALLVLIGIVSAINPDFFTIDNILNILRQTSVNAIIAVGMTFVILIAG-IDLSVGSVLA 77

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L       + ++  V  + +   G+   + +                + F  
Sbjct: 78  LTGAIAASLVGSEFSMLLVIPAVLFIGAFLGGVSGVIVAK------------GKVQAFIA 125

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +          F      Y   +   +  M  + A
Sbjct: 126 TLVTMTLLRGVTMVYTDGRPISTGFSDAADQ-----FSYLGTGYLFGIPVPIWLMAVVFA 180

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L+ T I      +  N+ A       +   K+  FAVS     +AG    +    
Sbjct: 181 VAWYILKHTRIGRYIYALGGNEAATQLSGINVNKIKVFVFAVSGFLSALAGLIVTSRLSS 240

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+     +GG   +        I+  +      ++   +  ++
Sbjct: 241 AQPTAGVSYELDAIAAVVVGGTSLMGGKGRVMGTLIGALIIGFLNNALNLLDISSYYQMI 300

Query: 311 KFDCSFNMRHT 321
                      
Sbjct: 301 AKALVILAAVL 311


>gi|311109346|ref|YP_003982199.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310764035|gb|ADP19484.1| inner-membrane translocator 67 [Achromobacter xylosoxidans A8]
          Length = 309

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 95/305 (31%), Gaps = 16/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y +   G  ++  + G+ +        + A S                 + A +
Sbjct: 12  LMSGMLYALIGLGFVLIFKASGVFNFAQGAMVLVAALSMARFSEWLPRWFGFDNMILANV 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN----GKAGIYVADRLYF 158
                  + +  L    +   +  L+  E    ++            G+     +     
Sbjct: 72  LAFIVSAIVMFLLAVAIERFVLRHLVNQEATTLLMATLGISYFLDGLGQITFGSSVYSIN 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G     L+         ++  +      +    L A++ L+ + T+   A R + D+ +
Sbjct: 132 VGMPKDPLMILDSVFEGGLLINLEDLTAAVIAALLVAALALFFQYTSTGRALRAVADDHQ 191

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +    +  ++V+     +AG  + +            +  +  + +VILGG+
Sbjct: 192 AAQSIGIPLNRIWVIVWSVAGLVALVAGIIWGSKFGVQFTLS---TAALRALPVVILGGL 248

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+    +L            ++   +          +   + +L R   
Sbjct: 249 TSVPGAILGGLIIGVGEKLSEVYLGSLVGGGIEIWFA---------YVLALVFLLFRPQG 299

Query: 339 LLRLR 343
           L   +
Sbjct: 300 LFGEK 304


>gi|157373130|ref|YP_001481119.1| ribose ABC transporter permease [Serratia proteamaculans 568]
 gi|157324894|gb|ABV43991.1| Monosaccharide-transporting ATPase [Serratia proteamaculans 568]
          Length = 321

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/313 (10%), Positives = 97/313 (30%), Gaps = 25/313 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 22  LIALLVLIAVVSSMSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 80

Query: 76  I-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           + GA +  I+G      + +   ++   +      + +   K +     +  +++     
Sbjct: 81  LTGAVAASIVGFEVNAVVAVAAALALGAAVGACTGVIVAKGKVQAFIATLVMMLLLRGVT 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +     P+  G                   +   F +        +     ++ + F++
Sbjct: 141 MVYTNGSPVNTG----------------FTDVADTFGWFGIGRPLGVPTPIWIMAIVFIA 184

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +L   R  +      +  N+ A      ++   K+  +++      +AG    A   
Sbjct: 185 AWYMLHHTR--LGRYIYALGGNEAATRLSGISVDKVKIIVYSLCGLLAALAGVIEVARLS 242

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++V     + GG   +        IL  +      +    +  +
Sbjct: 243 SAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQM 302

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 303 IVKAVVILLAVLV 315


>gi|294677394|ref|YP_003578009.1| branched-chain amino acid ABC transporter permease LivM
           [Rhodobacter capsulatus SB 1003]
 gi|294476214|gb|ADE85602.1| branched-chain amino acid ABC transporter, permease protein LivM-1
           [Rhodobacter capsulatus SB 1003]
          Length = 449

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 58/348 (16%), Positives = 117/348 (33%), Gaps = 26/348 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +   + +   + A      +D+      +  +   G    +    L         A+ 
Sbjct: 106 VLIAMVIAMATLVAAVFLHGRLDTKLRGWAVAGVLLLGF---IAYRTLFDPAVEAIQAVN 162

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
             +Y  LG      + +  PV A+++ A   ++G  +L  R DYLAIATL + EI   +L
Sbjct: 163 PSAYGYLGGIGLP-VLISWPVGALLAAAAAWVVGKTALGLRSDYLAIATLGIGEIIVAVL 221

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVR-----------SLIRFFRFPSSFVIYEIFMYYV 186
              + +  G   +    R + +                +         S ++ ++    +
Sbjct: 222 RNEEWLARGVLNVNGIPRPWPVPYETNLQQDPGFVARATSFGLDPMTGSTLLVKLLYCLL 281

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            + +  L          +      R IRDN+ A  ++   +    L  F + SA +G+AG
Sbjct: 282 FVAVLGLLIWAAQLALNSPWGRMMRAIRDNEVAAAAMGKNVTGRHLQIFILGSAVLGLAG 341

Query: 247 AFFAASRDRISPDMFKFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A   +   +++P  +       ++  +VI+GG  +         ++  V           
Sbjct: 342 AMLISLDGQMTPSAYNPLRYTFLIWVMVIVGGSGNNWGSVLGGLLIWFVWIKAGEWGPTL 401

Query: 306 FNSLLK----------FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
              +               S       +M + L LV+      LL  R
Sbjct: 402 MGMVSTHLADGTLKTHLLDSAPHMRLVIMGLILLLVLRFSPRGLLPER 449



 Score = 42.2 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 38/112 (33%), Gaps = 3/112 (2%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYI---DSMGIQILIYVMFAWGLSIVVGSLGLL 66
           K+       A+    LL   +  +    +      +    LI  + A G++I  G  GL 
Sbjct: 13  KWRAPAMFGALAVLFLLEGTVSNSFFSGHWDNALGILRVGLISAILALGVNIQWGYAGLF 72

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           +   V   A+G  + V++        +       +I+    M   + ++   
Sbjct: 73  NTGVVGFLALGGLAPVLVSMPPTPGAFSAGGWGVLIAMVIAMATLVAAVFLH 124


>gi|293602430|ref|ZP_06684876.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292819192|gb|EFF78227.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 309

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 95/305 (31%), Gaps = 16/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y +   G  ++  + G+ +        + A S           +     + A +
Sbjct: 12  LMSGMMYALIGLGFVLIFKASGVFNFAQGAMVLVAALSMARFSEWIPRWLGFDNMILANV 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN----GKAGIYVADRLYF 158
                  M +  L    +   +  L+  E    ++            G+     +     
Sbjct: 72  LAFIVSAMVMFLLAVAIERFVLRHLVNQEATTLLMATLGISYFLDGLGQITFGSSVYSIN 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G     ++         ++  +      +    L A++ L+ + T+   A R + D+ +
Sbjct: 132 VGMPKDPMMILESVFEGGLLINLEDLTAAVIAALLVAALALFFQYTSTGRALRAVADDHQ 191

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +    +  + V+     +AG  + +            +  +  + +VILGG+
Sbjct: 192 AAQSIGIPLNRIWVIVWCVAGLVALVAGIIWGSKFGVQFTLS---TAALRALPVVILGGL 248

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+    +L            ++   +          +   + +L R   
Sbjct: 249 TSVPGAILGGLIIGVGEKLSEVYLGSLVGGGIEIWFA---------YVLALVFLLFRPQG 299

Query: 339 LLRLR 343
           L   +
Sbjct: 300 LFGEK 304


>gi|110668706|ref|YP_658517.1| ABC-type branched-chain amino acid transport system, permease
           protein II [Haloquadratum walsbyi DSM 16790]
 gi|109626453|emb|CAJ52914.1| ABC-type branched-chain amino acid transport system, permease
           protein II [Haloquadratum walsbyi DSM 16790]
          Length = 624

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 3/167 (1%)

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
           V Y  F     +       +I+     +      R IR+++    SL       KL +  
Sbjct: 404 VDYPRFQLAGFVLFFVGLYAIVERTVESPFGRVLRAIRNDETVVESLGKNPFTYKLQSMV 463

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           + SA  G AGA +A     ++   F      I + I+ +GG  +   +    A+     +
Sbjct: 464 IGSALGGFAGALWAMYAQGLTFTTFAPRVTFITLLIMFVGGAGNNKGMIIGAALFWAFQQ 523

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
               +  ++         +       ++ I   +V+      LL  R
Sbjct: 524 ATTQLAAFFPP---AIRVNIQAFRLVVVGILFLIVLYYLPEGLLGSR 567



 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 60/162 (37%), Gaps = 18/162 (11%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS------- 91
           + S  + + IY + A GL++  G  GLL    V  Y IGAY+  +               
Sbjct: 7   VVSFMLLVSIYGILALGLNVKYGHTGLLDFGHVGFYLIGAYTAALFVLGPDDPTDFTVYL 66

Query: 92  -----------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                          I    +++G  G ++ LP+++ R DYLAI  L +S IFQ ++   
Sbjct: 67  IGLGDIPILGSWVTAILAGTILAGIVGGLVTLPTIRLREDYLAITVLGISVIFQRVIQSE 126

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
             + NG   +            V             +++  +
Sbjct: 127 TWLANGPDALRGYSPPLQGPFPVTGETIIGAVLLGLIVFVAW 168


>gi|15827122|ref|NP_301385.1| transporter protein [Mycobacterium leprae TN]
 gi|13092670|emb|CAC29905.1| putative transporter protein [Mycobacterium leprae]
          Length = 602

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/315 (11%), Positives = 93/315 (29%), Gaps = 33/315 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L  ++            +   +  +  Q ++  +  +G++ V+   G + L+     
Sbjct: 307 FVALIALFVFFTAAAGAKFYAPSNLLVILQQTVVLAIVGYGMTFVI-MAGSVELSVGSIV 365

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+   +  ++ ++   +  +   +  + +G            +      ++TL M ++ +
Sbjct: 366 ALTGVTAALVAAQNQFAAIVTALLVGLAAGMVNG----IVFAYGKIPSFVSTLGMLQVCR 421

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I                          +             +     M ++L+   F++
Sbjct: 422 GI-----------------------TLMISDSSAKPMPFHGILGAMGAMPWILIVCLFVT 458

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               +  + T      + I  N++            K++ FA+     G+ G   A+   
Sbjct: 459 ILAGILFQFTMFGRWVKAIGGNERVATLAGVPTRGIKVAIFAICGLTAGLGGIVLASRLG 518

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +P      E  ++ ++VI      GG+  LS       I+  +      M      S 
Sbjct: 519 AGTPTAATGFEIDVIAAVVIGGTPLTGGLGRLSGTLIGAIIISMLSNGMVFMGVGNAASQ 578

Query: 310 LKFDCSFNMRHTTLM 324
           +             +
Sbjct: 579 IIKGIMLAAAVFVFL 593


>gi|255291992|dbj|BAH90476.1| branched-chain amino acid ABC transporter, permease protein
           [uncultured bacterium]
          Length = 326

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 52/320 (16%), Positives = 124/320 (38%), Gaps = 26/320 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L++ +      +  Y      +I+I ++F   L +V+G  G+ +L     Y  GAY+  
Sbjct: 21  LLIVLVAAIVFFAFPYDLGFITRIVIMMIFVLSLDLVLGIGGIATLGQAAMYGTGAYAAG 80

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +          L +   A+       + GL  ++  G  L + ++ ++++ Q I  K +P
Sbjct: 81  LFAVHVTAEPVLGLVAGAIAGALIAAVSGLLLMRAHGLTLIMLSIAVAQVLQEIANKARP 140

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+        LG      +    F  +  +  I + ++ + +            
Sbjct: 141 VTGGVDGLRGIRMEPVLGIWEFDFVGQTGFIYATCVLLIVVVFLKVLL------------ 188

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+      R I ++     ++ T +    +  + +  A  G+AGA  A   + +S +++ 
Sbjct: 189 RSPFGQMARGIHESPARMRAIGTPVYSRLVILYTIGGAIAGIAGALAAQITELVSVEVYG 248

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F+ +   + ++ILGG   +      TA+ +    +   ++ + +                
Sbjct: 249 FTLSAEGVIMLILGGTGRVYGALVGTALFMVTHHIAAAVDPFNW--------------LF 294

Query: 323 LMVIALFLVILMRSHSLLRL 342
           ++   + +V+ +    L+ L
Sbjct: 295 IIGAMVLVVVFVLPRGLVSL 314


>gi|254690996|ref|ZP_05154250.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus bv. 6 str. 870]
 gi|256256181|ref|ZP_05461717.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus bv. 9 str. C68]
 gi|260756590|ref|ZP_05868938.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870]
 gi|260882409|ref|ZP_05894023.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68]
 gi|297249542|ref|ZP_06933243.1| branched-chain amino acid transport system permease [Brucella
           abortus bv. 5 str. B3196]
 gi|260676698|gb|EEX63519.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870]
 gi|260871937|gb|EEX79006.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68]
 gi|297173411|gb|EFH32775.1| branched-chain amino acid transport system permease [Brucella
           abortus bv. 5 str. B3196]
          Length = 332

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/278 (16%), Positives = 105/278 (37%), Gaps = 14/278 (5%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+  +  L +       L  +  ++    +G       + ++  +I+   +    L +V 
Sbjct: 1   MTELTQPLPQTRHSYAGLIGIVAIIAASVVGWFLFPDNL-ALLTRIIAIALLVLSLDLVT 59

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           G  G+ +L     +  GAY   I  + +      L+  +  +     G++ G   L+  G
Sbjct: 60  GYCGIATLGHAALFGAGAYGAGIAAAHFGVTDPILMTVIGLLAGAVTGLVSGAVILRATG 119

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
               + ++ +  +F     K    T G  G+         G               F +Y
Sbjct: 120 LAQLVLSIAVVHLFHEAANKASGWTGGSDGLSGISPDPIFGI------------FEFDLY 167

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              +Y   + M  +S   + ++ R+      R ++++     ++  ++  A+L  + +S 
Sbjct: 168 GRTVYIYAVIMLLISFIFLRYVVRSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISG 227

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           A  G++GA  A S   +  D   F+ +   + +++LGG
Sbjct: 228 AVAGISGALNAISTQVVGLDSLSFTMSAEALVMLVLGG 265


>gi|325264915|ref|ZP_08131643.1| ribose ABC transporter, permease protein [Clostridium sp. D5]
 gi|324029904|gb|EGB91191.1| ribose ABC transporter, permease protein [Clostridium sp. D5]
          Length = 320

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 100/314 (31%), Gaps = 28/314 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++ ++  ++  +      +   I ++ +Q    V  A G+  V+   G + L+     A+
Sbjct: 22  IILLILFIVCCVLSSNFLTVMNIRNIALQQAAPVCVAVGMLFVI-LTGGIDLSVGSIMAL 80

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA     + + +G+++++ I  + ++    G I G      +                  
Sbjct: 81  GACVTATMMAEHGMNMFVGIIAAMLMGCILGGITGFFVAYTKMQGFV------------- 127

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                        +    R      T    ++  +     ++ + + Y ++L    +   
Sbjct: 128 ---------ASLAMMTMARGAAFMLTDGIPVKLEKGTLDVLVKKEYGYPIILCAALIVLL 178

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
                + T+       +  N  A       +    LS +A+S     +AG F AA     
Sbjct: 179 FWFIQKYTSYGRIVIALGSNSTAVELAGIRVKRYLLSVYAISGCLAALAGIFIAARSSTG 238

Query: 257 SPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           SP +    E   + + VI      GG  ++ K      +L  +  +   M    +   + 
Sbjct: 239 SPTVGDGQELDAITACVIGGANLAGGKGTVIKTLMGAFVLALIGNIMNLMAVPSYPQDII 298

Query: 312 FDCSFNMRHTTLMV 325
             C         + 
Sbjct: 299 KGCIIIAAVLLQLF 312


>gi|220922012|ref|YP_002497313.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219946618|gb|ACL57010.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 296

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 99/303 (32%), Gaps = 27/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      ++VM A GLSI+ G LG+++      + +GAY+  +       S W  + V
Sbjct: 15  LFSGVALGAVFVMLALGLSIIFGMLGIVNFAHGNVFMVGAYA-GVFVMERTGSFWAALLV 73

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ GA G+++    ++          L+++     +L++   I  G  G+  A     
Sbjct: 74  GPLLVGALGLLIERFLIRPLAGRSPDDPLLLTFGLGYVLVEGVRILFGSDGLPFATPEEL 133

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                  + ++  +V+  +  +   +   L RT +    R    + +
Sbjct: 134 SGV----------ADLGVGFFPVYRLFVVGVVALVLVVLWYGLERTKLGLIVRAGARDPE 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   I    L  F +  A   + G   A  R                 ++ ++GGM
Sbjct: 184 ILRVLGVDIQRLWLWVFGLGIALAALGGVLAAPMRSV--NPEMGNVVLGEAFAVTVIGGM 241

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL                           +           +  M   + LV+L+R   
Sbjct: 242 GSLMGS--------------VVAGLLVGVVVSMTALVAPEMASMAMFAFMALVLLIRPQG 287

Query: 339 LLR 341
           L  
Sbjct: 288 LFG 290


>gi|113868230|ref|YP_726719.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
 gi|113527006|emb|CAJ93351.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
          Length = 341

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/321 (14%), Positives = 106/321 (33%), Gaps = 18/321 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L    +       +     +I  + + GL++V G + +L+       A+GAY    +  
Sbjct: 37  PLVGSPSTWLTLTIAGLAMGMIIFVVSSGLTLVFGLMDVLNFGHGAFIALGAYVAASVLL 96

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI--ATLIMSEIFQNILIKWKPIT 144
                +        +   A  +   + +    G +        +  +  + ILI    + 
Sbjct: 97  PMAGWVEADSLAQNLAVFALAIAAAMVAAGAVGLFFERVVVRPVYGQHLKQILITMGGMI 156

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
             +  I        +   V +  R         I +  +  + LG+     +++L L RT
Sbjct: 157 VAEQLIKAIWGPETIALQVPTTFRGAVLLGDAAIEKYRLIAMALGLVI-FIAMLLLLNRT 215

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            I    R   +N++   +L   +    +  F   +A  G+ G  +   +  I+       
Sbjct: 216 RIGLLIRAGVENREMVEALGYRVRRLFIGVFVAGAALAGLGGVLWGLYQQNIT-AAIGAQ 274

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
            N+++  ++I+GG+ S +       ++  +      +              F        
Sbjct: 275 VNVLIFIVIIIGGLGSTTGCFVGALLVGLMANYTGFL--------------FPKVALFSN 320

Query: 325 VIALFLVILMRSHSLLRLRTP 345
           ++ + LV+L R   L  +   
Sbjct: 321 ILLMMLVLLWRPQGLFPVARR 341


>gi|111026387|ref|YP_708670.1| ABC branched chain amino acid transporter ATP-binding subunit
           [Rhodococcus jostii RHA1]
 gi|110825230|gb|ABH00512.1| ABC branched chain amino acid transporter ATP-binding subunit
           [Rhodococcus jostii RHA1]
          Length = 909

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/293 (12%), Positives = 83/293 (28%), Gaps = 15/293 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I S      I+ +   GL +   + GL +        + AY +  L  + GL       +
Sbjct: 8   ILSGIATGAIFGLAGTGLVLTFKTSGLFNFGHGAIATVAAYVFYSLHVQLGLGALPSFVI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +  G    ++                ++ +      +     +  G A I V   L F
Sbjct: 68  AVLFVGPVLGLIMERVAARLAPQPVALQIVGTVGIMLAVQGLATLLYGPATIRVDQFLPF 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T              V+       +          +    R +    A R + D+  
Sbjct: 128 GTDTFS---------LGGVVLTWDFVIITGITLVAVGGLYALFRFSRTGLAMRAVVDDPN 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L T     + +A+ + S F  ++G   A      +  M             ++G  
Sbjct: 179 LVSMLGTNPTRVRRTAWVIGSTFTALSGVLVAPVIGLDAIGMTFLVVQ--AFGAAVVGAF 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +++ +      ++  +      ++  +                 ++ I L ++
Sbjct: 237 SNIPRTLIGGLVIGVL----ADLSKAWVLDAPWLAGVPATLPFLVLFIGLLVL 285



 Score = 45.6 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 84/217 (38%), Gaps = 18/217 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            S     +   +    L ++V + G +SL      AIGA ++  L    GL   + + V 
Sbjct: 334 LSFWSTAIATAIMVLSLGLLVRTSGQVSLCHAAFAAIGAVAFAQLSEGLGLPWIVALLVG 393

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           A++    G ++ +P+++  G YLA+AT     + Q +L     +    +      R    
Sbjct: 394 ALVVVPVGALVAIPAIRLSGLYLALATFGFGIMVQQLLYGQPWMFTSLSEGRRMPRPE-- 451

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                           F   +   YYVLL    + A +++ + R+ +    + + ++  A
Sbjct: 452 ----------------FATSQADFYYVLLAALVIVAILVVVIVRSRLGRVLQGMSESPMA 495

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
             +L  +    KL  F +S+   G+ GA     R   
Sbjct: 496 VTALGLSSTVTKLIVFCISAYLAGIGGALLGMVRHFA 532


>gi|255291865|dbj|BAH90360.1| branched-chain amino acid ABC transporter, permease protein
           [uncultured bacterium]
          Length = 326

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 52/320 (16%), Positives = 124/320 (38%), Gaps = 26/320 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            L++ +      +  Y      +I+I ++F   L +V+G  G+ +L     Y  GAY+  
Sbjct: 21  LLIVLVAAIVFFAFPYDLGFITRIVIIMIFVLSLDLVLGIGGIATLGQAAMYGTGAYAAG 80

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +          L +   A+       + GL  ++  G  L + ++ ++++ Q I  K +P
Sbjct: 81  LFAVHVTAEPVLGLVAGAIAGALIAAVSGLLLMRAHGLTLIMLSIAVAQVLQEIANKARP 140

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +T G  G+        LG      +    F  +  +  I + ++ + +            
Sbjct: 141 VTGGVDGLRGIRMEPVLGIWEFDFVGQTGFIYATCVLLIVVVFLKVLL------------ 188

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+      R I ++     ++ T +    +  + +  A  G+AGA  A   + +S +++ 
Sbjct: 189 RSPFGQMARGIHESPARMRAIGTPVYSRLVILYTIGGAIAGIAGALAAQITELVSVEVYG 248

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F+ +   + ++ILGG   +      TA+ +    +   ++ + +                
Sbjct: 249 FTLSAEGVIMLILGGTGRVYGALVGTALFMVTHHIAAAVDPFNW--------------LF 294

Query: 323 LMVIALFLVILMRSHSLLRL 342
           ++   + +V+ +    L+ L
Sbjct: 295 IIGAMVLVVVFVLPRGLVSL 314


>gi|220921108|ref|YP_002496409.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219945714|gb|ACL56106.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 292

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 89/300 (29%), Gaps = 22/300 (7%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  LIY + A GLS++ G + +++        I  Y+   L     L   +L+P+ A +
Sbjct: 14  LLMGLIYALIAVGLSLIFGLMDVVNFAHGEFLMIAMYATFFLVLATHLDPVVLMPLVAAL 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
             A G    L  ++F       A    +      +     +     G             
Sbjct: 74  LFALGATAYLGIVRF-------AMRAKANQGMVQIFATFGLAILLQGAAQYLFTPDYRNV 126

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             + +         V       +           + L + RT    A    R++Q A   
Sbjct: 127 QNTWLGGHTLDLGGVFLPWPQIFGAAVSLAAFGGLHLLMSRTDFGRALEATREDQGAVAL 186

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           + + +A +G+AGA  A             S  +I    V LGG  S++
Sbjct: 187 VGIDRNRVFALGWGLGAALVGLAGAVLAVFYYI--HPQVGASFALIAYVTVALGGFGSVA 244

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A  I+  V      +      S+              +      V+ +R   L   
Sbjct: 245 GALVAGIIVGLVEAFTAVILPPALKSVG-------------VYALYLAVVFVRPQGLFGR 291


>gi|332284979|ref|YP_004416890.1| ABC transporter, permease protein [Pusillimonas sp. T7-7]
 gi|330428932|gb|AEC20266.1| ABC transporter, permease protein [Pusillimonas sp. T7-7]
          Length = 295

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/318 (13%), Positives = 108/318 (33%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           ++    +        +    +    Y + + GL+++ G L +++      Y +GA+   +
Sbjct: 1   MIAIFGIPIQALLGQLLLGLVNGSFYAVLSLGLAVIFGLLNVINFAHGALYMLGAFVAWM 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
                GL+ WL++ ++ ++ G  G+++    ++       +  L+++     ++      
Sbjct: 61  GLQYLGLNYWLMLLIAPLLVGLFGIVIERTLIRHLYKLDHLYGLLLTFGITLLIEGLFRS 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G +G                 +        F+   I+  +V++    +  +    + +
Sbjct: 121 MYGVSGQPYPTP----------DLFKGGVNLGFMYLPIYRGWVVVASVIVCLATWFVIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N K   +    +       +    A    AG   A         +   
Sbjct: 171 TRLGALLRAGTENPKLVEAFGVNVPLVVTLTYGFGVALAAFAGVLAAPIMQV--SPLMGS 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  I+V ++V++GGM S+         L  +                     +     T+
Sbjct: 229 NLIIVVFAVVVIGGMGSIMGSILTGLGLGIIEGFTKVF--------------WPEASNTV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           + I + +V+L+R   L  
Sbjct: 275 VFIIMVIVLLLRPAGLFG 292


>gi|294497692|ref|YP_003561392.1| ribose ABC transporter permease RbsC [Bacillus megaterium QM B1551]
 gi|294347629|gb|ADE67958.1| ribose ABC transporter, permease protein RbsC [Bacillus megaterium
           QM B1551]
          Length = 319

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 104/312 (33%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L   +  +++ +   +      I ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 22  LLGLFILIVIVSILNPSFLEPLNILNLLRQVAINALIAFGMTFVI-LTGGIDLSVGSILA 80

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     +         L I +  ++    GMI GL   K +      ATL    IF+ 
Sbjct: 81  LSSALMAGMIVSGVD-PILAILIGCVLGAVMGMINGLLITKGKMAPFI-ATLATMTIFRG 138

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L   + F      Y + +    + M    A
Sbjct: 139 LTL-----------------VYTDGNPITGLGENYYFQLFGRGYFLGIPVPAITMILAFA 181

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + + L +T        I  N+KA F     +   K+  ++++     ++GA   +  + 
Sbjct: 182 VLWVILHKTPFGRRTYAIGGNEKAAFISGIKVPKVKVMIYSLAGLLAALSGAILTSRLNS 241

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F  ++
Sbjct: 242 AQPTAGTSYELDAIAAVVLGGTSLSGGRGRIVGTLIGALIIGTLNNGLNLLGVSSFYQMV 301

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 302 VKGIVILIAVLI 313


>gi|254460931|ref|ZP_05074347.1| ABC-type urea transport system, permease protein II
           [Rhodobacterales bacterium HTCC2083]
 gi|206677520|gb|EDZ42007.1| ABC-type urea transport system, permease protein II
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 341

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 51/314 (16%), Positives = 107/314 (34%), Gaps = 3/314 (0%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V+  L++   L               ++IY M    L ++ G  G+L       + +GAY
Sbjct: 9   VIITLVVSALLIWLLPLMISTYTLTVLVIYGMLGLSLGLIWGFGGILCFGQAAFFGLGAY 68

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y I     G S   +I    + +    ++  +       D       ++  +     + 
Sbjct: 69  TYAIAAINIGESTLPMILAVLVPAVFAALLGAMMFYGRLADVYLGVITLVVTLILFKFVN 128

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                 G   +    RL                  +  I+    +YV      +   ++ 
Sbjct: 129 STA---GPQYVIGNARLGGFNGIPGFQTLNVPGDPTAYIWGDPYFYVCAVALVIVFLLVT 185

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           WL R++       IR+N+     +   +   K   FA+ +A  G+AGA FA   + ++P+
Sbjct: 186 WLLRSSFGRIAVGIRENEVRMGLMGYDVATRKTVLFAIGAAIAGLAGALFANWGEIVTPN 245

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           +F   ++  +I   I+GG+ +        A L  +  +    +      +L       + 
Sbjct: 246 LFSLGQSAEIIIWCIVGGLGTRFGPIVGAAGLAYLKFMLGQQSMIDNTLVLGLILVLFVL 305

Query: 320 HTTLMVIALFLVIL 333
                ++     +L
Sbjct: 306 FLPRGLVPAVASLL 319


>gi|89098006|ref|ZP_01170892.1| Branched-chain amino acid transport system permease protein livH
           [Bacillus sp. NRRL B-14911]
 gi|89087169|gb|EAR66284.1| Branched-chain amino acid transport system permease protein livH
           [Bacillus sp. NRRL B-14911]
          Length = 289

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 103/306 (33%), Gaps = 27/306 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     ++  + A GL+++ G + +L+      +A GAYS   + ++ G   +    + 
Sbjct: 9   INGLATGMLIFLLAAGLTLIFGLMDVLNFAHGGLFAWGAYSGTWIFAQTGS--FAAGIIG 66

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           A+++G     +    +        +  ++++     +L +   +  G   +  +   Y  
Sbjct: 67  AVVTGLILGFLTERWIIKPVYGNHVQQILITLGLMLVLSELLKVVWGPNQLSASPPSYLA 126

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G           +    VI   +  ++++    +   +   LR T I    R    +++ 
Sbjct: 127 G----------SWELGGVIIIKYRVFIIIVGLLVFLGVQYILRNTKIGLVVRAGVMDKEM 176

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             SL   I    +  F   S    + G         I  +M      I+   +V++GGM 
Sbjct: 177 VQSLGINIKRVFMIVFMAGSGMAALGGVLLGPYSGVIHAEM-GMEFAILAFIVVVIGGMG 235

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S S    A  ++                               + ++ +  V++ R   L
Sbjct: 236 SFSGSILAAILVGLAGAFMSYY--------------VPSLSLAVNMLLMAAVLIFRPQGL 281

Query: 340 LRLRTP 345
            RL+  
Sbjct: 282 FRLKGR 287


>gi|270264076|ref|ZP_06192343.1| ribose transport system permease [Serratia odorifera 4Rx13]
 gi|270041725|gb|EFA14822.1| ribose transport system permease [Serratia odorifera 4Rx13]
          Length = 321

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 88/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 22  LIALLVLIAVVSSMSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 80

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +        + +                + F  
Sbjct: 81  LTGAVAASIVGFEINAVVAVAAALALGAAVGACTGVIVAK------------GKVQAFIA 128

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T V     +F      +   + +   +  M  +  
Sbjct: 129 TLVMMLLLRGVTMVYTNGSPVNTGFTDVADTFGWFG-----IGRPLGVPTPIWIMAIVFI 183

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 184 AAWYMLHHTRLGRYIYALGGNEAATRLSGISVDKVKIIVYSLCGLLAALAGVIEVARLSS 243

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 244 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 303

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 304 VKAVVILLAVLV 315


>gi|251795871|ref|YP_003010602.1| inner-membrane translocator [Paenibacillus sp. JDR-2]
 gi|247543497|gb|ACT00516.1| inner-membrane translocator [Paenibacillus sp. JDR-2]
          Length = 337

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 90/313 (28%), Gaps = 6/313 (1%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ VV  + + +      S   + ++  Q     + A G + V+   G + L+     
Sbjct: 17  IYVVLVVIFIGITISNPDFLSLSTLTNILHQNATKAIIALGAAFVL-ITGGVDLSAGRVV 75

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     +             ++ +      ++  L  L        + + +    F 
Sbjct: 76  GLSAVVSASMVQMSNYPQKFFPHLAELPVIVPVLLAVLCGLVVGLINGLVISKLHVPPFI 135

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L     +    +  +  D                    SF I    + Y+++    ++
Sbjct: 136 TTLGTMVIVLGVNSLYFDMDPNNSQPIGGLRSSFTKWGTGSFSIGSFNLPYLVIIAIVVA 195

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               +   +T +      I  N +A       +    L  + ++ A  G+AG   AA   
Sbjct: 196 IICWIVFNKTRLGKNMFAIGGNVQAAHVSGINVGRNLLWIYGIAGALYGLAGVLEAAKSG 255

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             S       E   + + V+      GG+ ++  +     I   +      +    +  L
Sbjct: 256 GASSAYGNMYELDAIAACVVGGVSTTGGIGTVPGVMAGVLIFGVINYGLTFIGVGPYFQL 315

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 316 IIKGAIIVAAVAI 328


>gi|119897416|ref|YP_932629.1| ABC transporter permease [Azoarcus sp. BH72]
 gi|119669829|emb|CAL93742.1| ABC transporter permease protein [Azoarcus sp. BH72]
          Length = 306

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/308 (10%), Positives = 89/308 (28%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL++V G +  ++L     +  GAY    +       I  ++  
Sbjct: 10  LINGIGYGLMLFLLAAGLTLVFGVMDTMNLAHGTLFMFGAYIAATVHEHSHSFIAAVLAA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +      ++  +   +          +    +        K +      +        
Sbjct: 70  VVVTVAIGALMETVLMRRLYRRNHLNQVVATFGVILLADDLVKWLWGAAPIMAPTPAALS 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +           + Y  +   +L      +  + + +  T +    R    ++ 
Sbjct: 130 GPVQLMAE----------LPYPSYRLLILAAGVAAALLLYVVVNHTRLGMLVRAGASDRP 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + +A  G+AGA                +  I  + ++++GG+
Sbjct: 180 MAELMGVRVQSVFTVVFVLGAALAGVAGALMGPL--TAVQIGMGEAILIPALVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335
            S+     A  ++  V             +++    +           M + +  ++  +
Sbjct: 238 GSVRGAFVAALLVGLVDTAGRAFVPPALRAVMPPALAADVGPALAGIAMYVLMAAILCFK 297

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 298 PRGLFPAR 305


>gi|116252590|ref|YP_768428.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115257238|emb|CAK08333.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 294

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 81/304 (26%), Gaps = 23/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      IY + A G +++  +   ++        + A+  ++           ++  
Sbjct: 8   LMSGLATGSIYALAAIGFTLLWQAAQTVNFAQGEFVMLPAFFMLMALGAGLPMPLAILVA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A      G +     ++      A   L +      + I  K       G         
Sbjct: 68  LAASVFVLGYLFKRLIVEPMQASKAGGGLPLVIATMALAILLKESVKEFYGAEAQPFPE- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L+          +  +     L     +  ++ L+L RT    A +    N  
Sbjct: 127 -------LVSGGSLNVFGAVISVTDIAHLFISLAVVVALTLFLNRTRTGRAMQATAQNPN 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L        L  F +++A   +A          ++         +I     I+GG 
Sbjct: 180 VAEILGVDTRRMVLYTFLINAALASLASFLITPF--YLAKFSNGEYLGLIAFIAAIVGGF 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        ++  +  +                         + ++ L ++IL R   
Sbjct: 238 NQIRGALVGGLLIGVLDNMTATY-------------VTAEYRAAVPLVLLIVIILWRPEG 284

Query: 339 LLRL 342
           LL  
Sbjct: 285 LLGT 288


>gi|158315195|ref|YP_001507703.1| ABC transporter related [Frankia sp. EAN1pec]
 gi|158110600|gb|ABW12797.1| ABC transporter related [Frankia sp. EAN1pec]
          Length = 956

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 91/313 (29%), Gaps = 21/313 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +I        +Y +   GL +   + G+ +        + A+ +  L   +G    L  
Sbjct: 6   PFIVIGLATGAVYGLAGIGLVLTYKTSGIFNFGYGAVATLVAFCFYFLNVDHGWPWPLAA 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            VS ++      ++     +          ++ +     ++     +       +  +  
Sbjct: 66  AVSLLVFAPLLGLVLELLARSLNGASETIKVVATVGLILVVSSIGLL------WHPVNPP 119

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
            F     +  +R      ++         + L     +A +  + R        R + DN
Sbjct: 120 TFPHFLPQDTVRMVGVNVTWEEI-----ILFLLSAAAAAGLYWFFRSVRFGIVMRGVVDN 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +         +  + +A+ + S F G+AG   A S D     +          + +   
Sbjct: 175 HELISMSGDDPVLVRRAAWVIGSVFAGVAGLLLAPSHDLDGVTLTTIVFAAFGAAAIGY- 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
             T+L        ++     L    +                    L  + LF+ +++  
Sbjct: 234 -FTNLPLTFVGGLVVGIASSLVDKYS--------ATITWIGGLPPALPFVILFVALIVLP 284

Query: 337 HSLLRLRTPSNFL 349
             LL  R  +  L
Sbjct: 285 RRLLAQRRLTAVL 297



 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 53/316 (16%), Positives = 118/316 (37%), Gaps = 14/316 (4%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y   + +    + + + L       Q    ++    LI +M    L ++V   G +SL  
Sbjct: 303 YHAPVRIRLTTFAIAIVLLGLVPTIQSGHIAVWSSALINIMLFLSLGLLVRRSGQISLCH 362

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           +   A+GA ++    +   +     + ++ +++   G ++ +P+++  G +LA+ATL + 
Sbjct: 363 LAFAAVGAAAFGHFSNS--MPWLPALILATLVAIPVGALISIPAVRVSGVFLALATLGLG 420

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            + + +      + +  A    A R              F   S  +  +   YY+LL +
Sbjct: 421 ILAEQVFYTRNFMFSQSALGIEAPRP------------VFSIGSLDLSSDKGFYYLLLVI 468

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L A +I  +    +      + D+  A  +  TT    K+  F V++A   +AGA  A
Sbjct: 469 TVLVAGVITAIGHGRLGRLLEALADSPLALETHGTTSSVLKVIVFCVTAAIASLAGALNA 528

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                     +    ++ ++++V++  +        A      +     G N     +LL
Sbjct: 529 MLFHFGVGTYYPSFSSLTLVALVVIVTIGDPWYALVAAVGYSVLPAYITGQNTSTVLNLL 588

Query: 311 KFDCSFNMRHTTLMVI 326
               +      T   +
Sbjct: 589 FGLGAATAAWGTRGGV 604


>gi|296534309|ref|ZP_06896786.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
 gi|296265375|gb|EFH11523.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
          Length = 290

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 86/305 (28%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    Y + A GL++V G L +++           ++ + +    G+  +  I  
Sbjct: 11  MVNGLMTGAAYALVALGLTLVYGVLHIVNFAHGALLTCAMFAVLGMEMLLGIGPYASILP 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A++  A G  +    +          TL+++     IL                     
Sbjct: 71  LAVLFYALGYALQRYVIGPSSHGEDRNTLLVTLGLSIILENALL-----------AAFRS 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              ++     F       ++              ++A + L L R+    A R +   + 
Sbjct: 120 DTRSLGGDAGFDVVELGPMLLSRPRMIGFAVALLVAALLWLLLARSDTGRAIRAVAKERF 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           F +  A + +A      +           +  ++  +IV+LGGM
Sbjct: 180 GAQLVGIDPRHIFAVTFGIGCACLAVAACLLLPTFYV--NPRVGNAFVLVAFTIVVLGGM 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++        +  V  L           L  F     +                R   
Sbjct: 238 GSVTGALLGGLFIGVVESLGGLFLGESLGQLGIFLIFILVLLL-------------RPTG 284

Query: 339 LLRLR 343
           L   R
Sbjct: 285 LFGAR 289


>gi|295107758|emb|CBL21711.1| Ribose/xylose/arabinose/galactoside ABC-type transport systems,
           permease components [Ruminococcus obeum A2-162]
          Length = 327

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 96/304 (31%), Gaps = 18/304 (5%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M     ++     ++ +  V   + +          + + ++   +    + A G++I++
Sbjct: 7   MKAMIKQMQSVIALVIIFVVASTICIKDGRNNFLDIRNLMNVLRAVSENGIIAIGMTIIL 66

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
             LG + L+      + +     L  + GL     I VS  I    G+  GL   K R  
Sbjct: 67  -ILGDIDLSVGSVVGLISTGCAYLMVKSGLGFVPAILVSLGIGALFGLFNGLCITKLRLQ 125

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
                TL    I + +   W             + +      V  +  +   P   +I+ 
Sbjct: 126 AFI-VTLASMNIARGLARFWANGIGIPLAYGKGEGMAPPAFEVLQMRLWGIVPVPAIIFI 184

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           + +    + +            +T        I  N+ A +     +   K+ AF + + 
Sbjct: 185 VLLIVFQIILS-----------KTRFGRQVYAIGGNKNAAYLSGIKVDRIKIYAFMICAM 233

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVV 295
              +A    AA   +  P+  +  E   V +  I      GG  ++        IL  + 
Sbjct: 234 LSSVAAMIHAAQISQGGPNEGQGYELNAVAACAIGGTSLAGGKGTIFGTLIGALILGMLD 293

Query: 296 ELCC 299
            +  
Sbjct: 294 NVLG 297


>gi|293393670|ref|ZP_06637979.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
 gi|291423792|gb|EFE97012.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
          Length = 322

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 97/313 (30%), Gaps = 25/313 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAVVSTMSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  I-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           + GA +  I+G      + +   ++   +      + +   K +     +  +++     
Sbjct: 82  LTGAVAASIVGFEVNAVVAVAAALALGAAVGACTGVIVAKGKVQAFIATLVMMLLLRGVT 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +     PI  G                   +   F +        +     ++ + F++
Sbjct: 142 MVYTNGSPINTG----------------FTDVADTFGWFGIGRPLGVPTPIWIMAIVFIA 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +L   R  +      +  N+ A      ++   K+  +++      +AG    A   
Sbjct: 186 AWYMLHHTR--LGRYIYALGGNEAATRLSGISVDRVKIIVYSLCGLLAALAGVIEVARLS 243

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++V     + GG   +        IL  +      +    +  +
Sbjct: 244 SAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQM 303

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 304 IVKAVVILLAVLV 316


>gi|315648679|ref|ZP_07901775.1| Monosaccharide-transporting ATPase [Paenibacillus vortex V453]
 gi|315275881|gb|EFU39232.1| Monosaccharide-transporting ATPase [Paenibacillus vortex V453]
          Length = 350

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 92/317 (29%), Gaps = 23/317 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    V+  + + +   +  + + I  M     I  + A G+ +V+     + L+     
Sbjct: 38  LLGFIVLLSIAVQIRNPSFLTLENISDMATNTAILSILAVGMMLVI-VTRGIDLSIGAIL 96

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+   +  +    +      L+ +     G    ++    +   G    IATL M  +F+
Sbjct: 97  ALSGMTAALTVGAFPDLHPALVIMLGTAVGWISGLVVGFLVAKVGILPIIATLGMMNVFR 156

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +                       G  V +      F        + +  ++L    + 
Sbjct: 157 GLTYMISG-----------------GKWVSAHQMPSSFKGIATASFLGVNNLILIAIVIY 199

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                +++ T        +  N  +               +A+  +  G+AG  + +   
Sbjct: 200 LVAYYFIQHTRTGRQIYAVGSNPDSAQISGIKSDRIIWLVYAIMGSLAGLAGVLWVSKFA 259

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
               D     E  ++ + V     I GG   +S I   + +   +      +N   F  +
Sbjct: 260 SAQGDTASGYELSVIAACVLGGVSIAGGSGKISGILLGSILFGILNNALPLINVSPFWQM 319

Query: 310 LKFDCSFNMRHTTLMVI 326
                   +       +
Sbjct: 320 GIQGGVILIAILVNAFV 336


>gi|256383654|gb|ACU78224.1| ABC transporter, permease protein [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|256384485|gb|ACU79054.1| ABC transporter, permease protein [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|296455703|gb|ADH21938.1| ABC transporter, permease protein [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
          Length = 855

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/350 (10%), Positives = 92/350 (26%), Gaps = 49/350 (14%)

Query: 13  KILCLLAVVYPLLLFLFLGAT----------KSQKYIDSMGIQILIYVMFAWGLSIVV-- 60
            I+    V    L FL +               + +       + +Y++    ++I    
Sbjct: 35  SIIVGFIVSGIFLSFLNINPFTYFALLFGINFDKNFYQISLNWMAVYIVAGLSMAIAFKS 94

Query: 61  -----GSLGLL----SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
                G+ G +    S+  ++ ++I         S     + +L+ ++ +IS A    + 
Sbjct: 95  GVFNIGASGQILTATSVATIVFFSISG----KDASSITPFMIILMLITCIISAAFIAFIA 150

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
                            + E+   IL+ W      K             +     I   +
Sbjct: 151 GILKAL---------FNIHEVVSTILLNWSVFYIFKWFFGRYQDFSSGLSYTSKNIPSDQ 201

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                    I +    L        I +   +T +    + +  +      +   +    
Sbjct: 202 LSIGSNTVIIPL----LIALICVIIIWILFSKTVLGFKLKAVGSSITGSKYIGINVKRQI 257

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA---KAT 288
           +++  +S A  G+AG     +    +         +   +I +     SL          
Sbjct: 258 ITSLTLSGAVAGIAGFLSMFTVSPNNFFASNSLPTLGFDAIAV-----SLV-AFNNPIGI 311

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF--LVILMRS 336
             +  +  +         +          +    L+       + I  + 
Sbjct: 312 IAIGWLWAIIKTGGGPISSLYSISTQISGLISGILIYFTAIVSVFIAFKP 361


>gi|187476803|ref|YP_784827.1| branched-chain amino acid transport permease [Bordetella avium
           197N]
 gi|115421389|emb|CAJ47894.1| putative branched-chain amino acid transport permease [Bordetella
           avium 197N]
          Length = 293

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 95/304 (31%), Gaps = 23/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   IY +   GL+++ G L +++        +GAY    L    G++  + +P+
Sbjct: 9   LINGLILGAIYGLIGVGLNVIFGVLRVVNFAHGEFLVLGAYFAYYLMEYAGINPLIALPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S  +    G ++    +             +  +F   ++          G  +      
Sbjct: 69  SFAVFFLAGYLLYFVLIPRLSKAEDPEMSSLLLMFGVSIM---------LGAIMLLAFDA 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              ++   +    F    VI        L+    + A++ ++L R+ +  A R I  N+ 
Sbjct: 120 DARSLPFEMEPVFFKFGQVIIPTVRLLALVIALAIIAALTVFLYRSQVGKALRAIIMNRD 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +          AF +       +G   A      SP M      +I   +++LGG+
Sbjct: 180 AVRIVGINAQRLSAVAFGLGLGLAAASGVLVAMVFPSFSPFM-GNDYTLIGFIVIVLGGL 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                      +     ++                       T L    +  +I +R   
Sbjct: 239 GHPVGALVGALLFAITEQVSVVFFN-------------PSIATILGFALMVAMIFIRPSG 285

Query: 339 LLRL 342
           L   
Sbjct: 286 LFGR 289


>gi|91779060|ref|YP_554268.1| ABC sugar transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91691720|gb|ABE34918.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia xenovorans LB400]
          Length = 352

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/310 (13%), Positives = 95/310 (30%), Gaps = 23/310 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++ ++  +   L      + + +  + + + I  +   G+++V+  +  + L+     
Sbjct: 39  LFVVLILLIVGTGLAKPQFLNLQNLRDVLLNVSIISLLTAGMTVVI-LMRHIDLSVGSTV 97

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I AY+   L   +     ++   + +  G     +    +        +ATL    IF+
Sbjct: 98  GISAYAVGSLYVAFPQMPVIVALAAGLAIGLVAGGINALLVAVGRVPSLVATLSTLYIFR 157

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                W                        SL   F   ++  +  I    ++  +    
Sbjct: 158 GADYAWVH---------------GGQINATSLPDAFSRLATGTLLGIPTLALIAIVVLAG 202

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++ L   R         I  N +A       +    ++ F +S A  G AGA + A   
Sbjct: 203 LAVYLKQFRG--GREHYAIGSNPEAARLAGVNVERRVMAGFLLSGAIAGFAGALWLARFG 260

Query: 255 RISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +          +     +V S+ I GG+ ++        +L  +      ++   F   
Sbjct: 261 TVDASTAKGIELQVVAAAVVGSVAITGGVGTILGATLGALVLGVISIALVVLHVSPFWEQ 320

Query: 310 LKFDCSFNMR 319
                     
Sbjct: 321 AIEGALIVAA 330


>gi|239815403|ref|YP_002944313.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239801980|gb|ACS19047.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 327

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/298 (15%), Positives = 99/298 (33%), Gaps = 18/298 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               +I  + A GL++V G + +L+    +  A+GA+    +    G           ++
Sbjct: 39  LAMGMIIFIIASGLTLVFGLMDVLNFGHGVFIALGAFVASSVLGLMGDWTGSGELWRNLV 98

Query: 103 SGACGMIMGLPSLKFRGDYL--AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +    M++ +      G      I   +  +  + ILI    +  G+  I V      + 
Sbjct: 99  AVFPAMLVAMVVASAVGLAFERFIVRPVYGQHLKQILITMGGMIIGEELIKVIWGPAQIP 158

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             +   +R   F  +      +    +     +   +   L RT I    R    +++  
Sbjct: 159 LPLPEALRGSLF-VADAAISKYRLLAVAVGVVVFGLLAWTLARTKIGLLIRAGVQDREMV 217

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            SL   I    +  F V SA  G+ G  +   +  + P M     N+++  ++I+GG+ S
Sbjct: 218 ESLGYRIGRLFVGVFVVGSALAGLGGVMWGLFQQNLVPQM-GAQVNVLIFIVIIIGGLGS 276

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                    ++  +      +                       ++ +  V+L R   
Sbjct: 277 TGGALIGALLVGLMTNYIGFL--------------LPTLTQFASILLMVAVLLWRPQG 320


>gi|297562098|ref|YP_003681072.1| inner-membrane translocator [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846546|gb|ADH68566.1| inner-membrane translocator [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 518

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/354 (11%), Positives = 89/354 (25%), Gaps = 66/354 (18%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP----- 97
            +  L+  + A GLS++ G+  L++         GA   ++  +        L+      
Sbjct: 178 LLFGLVIAVSAIGLSLIFGTTKLINFAHGDLVTFGAMIALLFSTGAAGMGNALLALFLGL 237

Query: 98  ----------------VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                            + +++    +++G+      G         +      ++    
Sbjct: 238 GAAVLIGAFLEARLSRTALVVAQWSSILVGIALATVLGVMGDAVGWSVPLWLAAVVAVLM 297

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               G +      R           +       + V+  + +     G    +   +  +
Sbjct: 298 GAVLGGSMERYIWRPLRHRNVAMIQMFIVSIGLALVVRHVILVLFGAGRERYAGFQLQEM 357

Query: 202 RR------------------------------TAISNAWRTIRDNQKAFFSLNTTIIFAK 231
            R                              T I  A R + DN+    S    +    
Sbjct: 358 VRLGPVSMPPRDLVVMAVAVVVLVGVACLLQFTRIGKAMRAVSDNRDLAESSGIDVDRVT 417

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           L  + +      + G  +    +++      F   +++ + VILGG+ +          +
Sbjct: 418 LYVWGLGGGLAALGGVLYG--LNQVVEYEMGFRLLLMMFAAVILGGLGTAYGAMVGGLAV 475

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
             V  L                    M               +R   LL  R  
Sbjct: 476 GLVAMLSTLWFPSQLMQAWALALMILMLL-------------VRPQGLLGRRER 516


>gi|87303362|ref|ZP_01086150.1| permease protein of branched-chain amino acid ABC transporter
           [Synechococcus sp. WH 5701]
 gi|87282010|gb|EAQ73972.1| permease protein of branched-chain amino acid ABC transporter
           [Synechococcus sp. WH 5701]
          Length = 293

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 54/312 (17%), Positives = 110/312 (35%), Gaps = 48/312 (15%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI------- 92
            S+ +Q+    + A  + + +   G LSL     Y IG Y   +L +R+           
Sbjct: 4   LSLLVQMGFGALLALSVYLPL-RCGQLSLATPGFYVIGGYVAALLSTRWPALWGDGAGYP 62

Query: 93  ----WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
                L + ++A+++ A  +++G P L+ RG YLAIAT+ + EI + + +  +  + G  
Sbjct: 63  LTSLALELLLAALVAAAVALVLGRPVLQLRGIYLAIATIALVEILRVLNLNLEW-SGGAV 121

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           GI+   + +                                +  L   +   L    +  
Sbjct: 122 GIFGIPQPF--------------------AGPGGYALATGVLLALVCWLCARLEAMRLGR 161

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           A   IRD++ A   +       KL+AF +S+    + G   A   +  +     F  ++ 
Sbjct: 162 AMAAIRDDELAARCMGIPTADVKLTAFVLSAVIAALTGVLAAHFLNTWNARQGSFDASVT 221

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
            ++ V+ GG            ++  + EL                         L  + +
Sbjct: 222 TLAFVVFGGSRIWLGPVLGGLVITALPELLR---------------PVGDLRLILFGLVI 266

Query: 329 FLVILMRSHSLL 340
            +  ++    L+
Sbjct: 267 LVGPILFPQGLV 278


>gi|291532757|emb|CBL05870.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           (TC 3.A.1.4.-) [Megamonas hypermegale ART12/1]
          Length = 227

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 74/225 (32%), Gaps = 11/225 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++      Y +GAY      +   +SI   + +
Sbjct: 11  LINGISLGSIYALIALGYTMVYGIIKLINFAHGDIYMVGAYVGFYAVTMTKMSIIPALII 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +++G  G+++   + K       I+ LI +      L                  +  
Sbjct: 71  SMVVTGLLGILVEKIAYKPLRKAPRISLLITAIGVSFFLE-----------YTSMYFVSP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T  ++I          +       + +    L   +   +++T +  A R +  + +
Sbjct: 120 TPRTFPNVIDSLSLNIGSFVINGQQLLIFIITVILMVLLTYIVQKTKMGKAMRAVSFDTE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
               +           F + SA     G       + I P M  +
Sbjct: 180 TAQIMGINADRVISFTFGIGSALAAAGGVLVGVYYNSIDPLMGDY 224


>gi|296156671|ref|ZP_06839509.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295893270|gb|EFG73050.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 352

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 96/310 (30%), Gaps = 23/310 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++ ++  +   L      + + +  + + + I  +   G+++V+  +  + L+     
Sbjct: 39  LFVVLILLIVGTGLAKPQFLNLQNLRDVLLNVSIISLLTAGMTVVI-LMRHIDLSVGSTV 97

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + AY+   L   +     ++   + +  G     +    +        +ATL    IF+
Sbjct: 98  GVSAYAVGGLYVAFPQMPVIVALAAGLAIGLVAGSINALLVAVGRVPSLVATLSTLYIFR 157

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                W                        SL   F   ++  +  I    V+  +  + 
Sbjct: 158 GADYAWVH---------------GGQINATSLPDAFSRLATGTLLGIPTLAVIAIVVLVG 202

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++ L   R         I  N +A       +    +S F +S A  G AGA + A   
Sbjct: 203 LAVYLKQFRG--GREHYAIGSNPEAARLAGVNVERRVMSGFLLSGAIAGFAGALWLARFG 260

Query: 255 RISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +          +     +V S+ I GG+ ++        +L  +      ++   F   
Sbjct: 261 TVDASTAKGIELQVVAAAVVGSVAITGGVGTILGATLGALVLGVISIALVVLHVSPFWEQ 320

Query: 310 LKFDCSFNMR 319
                     
Sbjct: 321 AIEGALIVAA 330


>gi|262166720|ref|ZP_06034457.1| ABC-type uncharacterized transport system permease component
           [Vibrio mimicus VM223]
 gi|262026436|gb|EEY45104.1| ABC-type uncharacterized transport system permease component
           [Vibrio mimicus VM223]
          Length = 334

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/326 (11%), Positives = 90/326 (27%), Gaps = 26/326 (7%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            ++   Y      + +     + L      S   + ++  Q     + A G++ V+ +  
Sbjct: 17  PIQWRDYIIYFVFVGIFIFFSVMLHDKGFLSSVNLMNIARQTATIAIMAVGMTFVLSAA- 75

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+     A+ A    +   +   SI + +  + ++    G I G+   +        
Sbjct: 76  EIDLSFGATVALAAIVSAL-TLQETDSILMAVSAALLVGTMIGFINGIFVTQVGIPSF-- 132

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
                             +T G  GI      +        +                  
Sbjct: 133 -----------------LVTLGTTGIITGIARWSTSLQSIPIDNDTYAFIFGSGDIGPFS 175

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            + +    ++A     LR T           N+ +       +   KL    ++     +
Sbjct: 176 VLFIWTLLVAAVGAFVLRNTTFGKHVLATGGNKVSAMYSGINVNRIKLYVLMLNGFLAAL 235

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
           AG  ++         + +    +++ +++I      GG  ++        I+  V     
Sbjct: 236 AGILYSGRLYSARYTLGESDLMLVIAAVIIGGTSLFGGKGTVIGSVIGALIMGMVNNGLI 295

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMV 325
            M       L+       +  T  M 
Sbjct: 296 LMGLNVDQQLILRGIIVIVAVTFTMG 321


>gi|221068526|ref|ZP_03544631.1| inner-membrane translocator [Comamonas testosteroni KF-1]
 gi|220713549|gb|EED68917.1| inner-membrane translocator [Comamonas testosteroni KF-1]
          Length = 315

 Score = 63.7 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 66/329 (20%), Positives = 124/329 (37%), Gaps = 39/329 (11%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           IL        LL    L    + +Y  S+ I IL+Y + A   ++  G    +SL  V  
Sbjct: 8   ILIWAVSAVALLGLALLPRWLTDEYYLSLMISILMYCVLATAWALFSGPTRYISLATVAF 67

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           + +GAY   + G        L I  +A +     +I+GL +L+  G Y  I +  ++E+ 
Sbjct: 68  FGMGAYVTAVFGESLPWVAVLGI--AAGVGLVMALIVGLSTLRLSGVYFVIFSFGLAELV 125

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           + ++  W+                       ++ +         I ++ +Y+ LL M  L
Sbjct: 126 KQLVTWWEV----------------------NITKDLGRYVFVEITQLDIYWQLLAMLAL 163

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
             ++   + R+ +  A R I +++     +      AKL  FAVS+ FI + GA  A   
Sbjct: 164 VLALRALINRSRLGLALRVIGEDETVATHVGINTTTAKLLLFAVSAVFITVTGAIMAPRW 223

Query: 254 DRISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
             I P   F  + +   + + +LGG  +L         L+ + E                
Sbjct: 224 TYIDPSIAFAPAVSFQTLIMALLGGAGALFGPILGAVPLVLLFEYLAA------------ 271

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             +F    + L+ +   +++      L  
Sbjct: 272 --NFPNHFSILLGLVFIVIVYFIPQGLSG 298


>gi|288916574|ref|ZP_06410950.1| inner-membrane translocator [Frankia sp. EUN1f]
 gi|288352005|gb|EFC86206.1| inner-membrane translocator [Frankia sp. EUN1f]
          Length = 707

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 56/290 (19%), Positives = 107/290 (36%), Gaps = 15/290 (5%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
             +   +   +     VV+ L+L   LG  +   Y      QI  + + A     + G  
Sbjct: 301 VPVPSVRGTLLFAGAIVVFGLVLASLLGEGELITY-----GQIFSFGVIALSYIPLAGYA 355

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G +SL  +    +GA  +   G          + ++ ++S   G ++ LP+L+  G YLA
Sbjct: 356 GQISLCQLSVAGVGAAVWAHAGGHGE---LWALALAVVVSAVVGALIALPALRLSGVYLA 412

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           + T   + I    +        G                V     F           +F 
Sbjct: 413 LGTTAFAFILDRWIFTLPSFEIGG---LKISLFDGGAVDVAGPSLFGWHLDDGSELMVFA 469

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
              L        ++    RR         +RD++ A+ +L   ++ AK++ FA+S+   G
Sbjct: 470 AVWLALASIAVMAL----RRGRFGRQLIALRDSEAAYATLGGNLLLAKMAVFALSAGIAG 525

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
           + GA +   +  +S D F F   + +  + ++GG+T++         L G
Sbjct: 526 LGGALYGMQQRSVSGDQFSFVAGLPLYLVAVVGGLTAVGNGLFTGLALGG 575



 Score = 40.6 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 21/261 (8%), Positives = 68/261 (26%), Gaps = 10/261 (3%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                IY +   GL +   + G+ +            +  ++ +     +     +   +
Sbjct: 12  LSTAAIYAVIGSGLVLTYTTTGVFNF--------AHGAAGMMAAFAYWQLTEGWGLPVPL 63

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +    + +  P      + L +  +      + +++    ++   A            + 
Sbjct: 64  ALILVLAVLAPGFGLLVERLVLRPVQGMGDAERLVMTVAMLSGLIAISRWVWDPNEARSL 123

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
            +                      ++    ++  + + L  T +    R   D++     
Sbjct: 124 PKFFENADSIDIGPATITWHQAITMIVAVVVAIGLRVLLYGTRVGAEMRASVDDRALVGL 183

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                + A   A+ + +    + G   A +              +   +  I G + SL 
Sbjct: 184 TGANPVRANKVAWILGTQLAAIGGILIAPAVTL--DAAQLSLLIVSAYTAAIFGRLRSLP 241

Query: 283 KIAKATAILIGVVELCCGMNF 303
                  ++  +     G   
Sbjct: 242 LTFVGAIVVGCLESYLTGYLP 262


>gi|254475859|ref|ZP_05089245.1| inner-membrane translocator [Ruegeria sp. R11]
 gi|214030102|gb|EEB70937.1| inner-membrane translocator [Ruegeria sp. R11]
          Length = 306

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 52/306 (16%), Positives = 113/306 (36%), Gaps = 15/306 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++  + A GL++V G +GL++L     Y +GA++  I+ +  G  +  L+  
Sbjct: 10  ILNGLQFGVMLFLMAAGLTLVFGVMGLINLAHGALYMVGAFAAAIVAAWTGSFVLALVAS 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A  + A  ++  L   K              +    +L  +  I     G       + 
Sbjct: 70  LAAAAAAGALVELLVIRKLYDR----------DHLDQVLATFALILIFSEGTRWVFGSFP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   V S +         + Y ++   ++     ++A +   + RT I    R    +++
Sbjct: 120 LFLDVPSYLSGPISLPGGIEYPLYRLTIIAIGLVVAAGLFWLIARTRIGIQIRAGESDRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+
Sbjct: 180 MIAALGVDISKLYTLVFALGAALAGLAGALVGAIQSV--QVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM---RHTTLMVIALFLVILMR 335
            S+        ++     L        F   ++   + ++     + L+ I +  ++L+R
Sbjct: 238 GSIKGAMVGALLVGLTDTLGGVFLPQLFGLFMEPASATSVGASLASMLIYILMAAILLVR 297

Query: 336 SHSLLR 341
              L  
Sbjct: 298 PSGLYG 303


>gi|126738113|ref|ZP_01753834.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
 gi|126720610|gb|EBA17315.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
          Length = 343

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/336 (11%), Positives = 104/336 (30%), Gaps = 17/336 (5%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R+  +  +L +  +     L +   A+     +  + + ++I+ + A GL++V G + ++
Sbjct: 19  RIAPHMPVLLVPLLAIAGFLAIMNPASWLTLTVSGLAMGMMIF-VMASGLTLVFGLMDVI 77

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           +       ++GA+  + +    G           + +    +   + +    G       
Sbjct: 78  NFGHGAFVSVGAFVGISVLLALGHMTSAPSLFLNLGAILAAVTAAMLATGAMGWAFEKVI 137

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR-FPSSFVIYEIFMYY 185
           +          I             +                       +    E +   
Sbjct: 138 VAPVYGHHLKQILVTMGGLIVVEQLIIVFWGPEEIYFNRPETLKGAITFAGAAIEKYRLV 197

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            +     +  ++   LRRT +    R   +N +   ++   +    +  F   SA  G+ 
Sbjct: 198 AVAVGILVFVTMRWVLRRTKLGLIVRAGVENGEMVMAMGYNLRLVFVGVFLAGSALAGLG 257

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  +A  ++ I+  M      I++  +VI+GG+ S+        ++  +      +    
Sbjct: 258 GVMWALYQEVITAHM-GNHAMILIFIVVIIGGLGSVEGCFIGALLVGLMQNYIAFLE--- 313

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                              +  +  +++ R   ++ 
Sbjct: 314 -----------PKAALISNIALMVAILMWRPMGMIP 338


>gi|257055156|ref|YP_003132988.1| monosaccharide ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
 gi|256585028|gb|ACU96161.1| monosaccharide ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
          Length = 358

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/296 (12%), Positives = 80/296 (27%), Gaps = 27/296 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
              +Q  I  M        + + G++ V+   G + L+     A+ A  ++   +     
Sbjct: 48  TFLTQDNISIMLRLAAAIGVVSVGMTFVI-IAGGIDLSVGSIVAL-ASVWMTTVATQSYG 105

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             +++  +  +   CG++ GL     +     +                           
Sbjct: 106 PVVMVLCALAVGLGCGLVNGLLISYGKVVPFIMTL--------------------AMMAS 145

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                  +      ++    F   F    + +  ++  +  + A   L L RT       
Sbjct: 146 AKGLAERISDRRTQVVTETGFTEFFRGSFLGIPVLVWLLALVFAVGWLVLNRTTFGRRTY 205

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            I  N +A       +       + +S    G+A     A     +     F E   + +
Sbjct: 206 AIGGNAEAARLSGINVKRHTALVYGISGLCCGIAAIMVVARTTSGASTNGLFYELDAIAA 265

Query: 272 IVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           +VI      GG  SL        I   +  +    N       +       +    
Sbjct: 266 VVIGGTLLSGGRGSLLGTLVGVLIFTVLNSIFTQNNLDTDIQNIAKGAIIVVAVLL 321


>gi|209551967|ref|YP_002283883.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209539560|gb|ACI59491.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 300

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 89/304 (29%), Gaps = 18/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G+ ++ G + +++        +GAYS ++   +    +++    
Sbjct: 4   VFDALSLGSLYALVALGIGLLFGVVKVVNFAYGDLITVGAYSLIVPSLQSHAQLYVGDFP 63

Query: 99  SAMISGACGMIMGL--PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             ++     +++                +    + +     + +        G     R+
Sbjct: 64  WPLVVVIVTLVVTSVALICDLAIFRPLRSADGATIMIATFALGYFIQNTILIGYGGLPRI 123

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
             +   + S   FF                ++    L A  +++LR TA+    R   +N
Sbjct: 124 VNMWPLLTSTTDFFG-----ARVPQLQLLTIILTACLLAIFVVFLRYTALGLEIRAAAEN 178

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                ++          A  +S+    +           I   M      +      I+G
Sbjct: 179 FPMARAMGIRAGRVTTIAIVMSAFLAALVSLILTVQTSVIGYRM-GAPLMVFGFIATIIG 237

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM SL         +  +  +   +                     L+   +F  ++++ 
Sbjct: 238 GMGSLLGAVVGGLAVGVLTVVAQTLLPEPLRG----------FRDALVYFLIFAFLVVKP 287

Query: 337 HSLL 340
             L+
Sbjct: 288 RGLI 291


>gi|188582796|ref|YP_001926241.1| inner-membrane translocator [Methylobacterium populi BJ001]
 gi|179346294|gb|ACB81706.1| inner-membrane translocator [Methylobacterium populi BJ001]
          Length = 296

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 104/303 (34%), Gaps = 27/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      ++VM A GLSI+ G LG+++      + +GAY+  +       S W  +  
Sbjct: 15  LFSGVALGAVFVMLALGLSIIFGMLGIVNFAHGNVFMVGAYA-GVFVMERTGSFWAALLF 73

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ GA G+++    ++          L+++     +L++   I  G  G+  A     
Sbjct: 74  GPLMVGALGLLIERFLIRPLAGRSPDDPLLLTFGLGYVLVEGVRILFGSDGLPFATPEEL 133

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                  + I+  +V+  +  +  ++   L RT +    R    + +
Sbjct: 134 SGV----------ADLGIGFFPIYRLFVVGVVALVLVALWYGLERTRLGLIVRAGARDPE 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   I    L  F +  A   + G   A  R                 ++ ++GGM
Sbjct: 184 ILRVLGVDIQRLWLWVFGLGIALAALGGVLAAPMRSV--NPEMGNVVLGEAFAVTVIGGM 241

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL     A  ++  VV +                       +  M   + LV+L+R   
Sbjct: 242 GSLMGSVVAGLLVGVVVSMTALFA--------------PEMASIAMFAFMALVLLVRPQG 287

Query: 339 LLR 341
           L  
Sbjct: 288 LFG 290


>gi|34498472|ref|NP_902687.1| D-ribose transport system permease [Chromobacterium violaceum ATCC
           12472]
 gi|34104327|gb|AAQ60686.1| D-ribose transport system permease protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 312

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 94/312 (30%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  + L +      +   + ++  Q+ I  + A+G+++V+  LG + L+     A
Sbjct: 15  FIALVLVAVGLSVMSPDFLTVNNLLNVMRQVSINALIAFGMTLVI-LLGGIDLSVGSILA 73

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     L       +   +    +++GA   +     +        IATL    I + 
Sbjct: 74  LSSVLTATLLRAGVDPMLATLL--GILAGAAMGLFNGLVVSKGKVAPFIATLASMTILRG 131

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + +                   G+ +                   +   ++ M  L A
Sbjct: 132 LALVFSN-----------------GSPITGFDSELFSMLGGGYVAGLVPVPVVWMLILFA 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L++T           N++A       +   KL  +  S A   MAG    +  + 
Sbjct: 175 GFWFLLKKTVFGRHLYATGGNEEAARLSGVKVDSVKLWVYTTSGAMAAMAGVVLTSRLNS 234

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        ++  +      +    F   +
Sbjct: 235 AQPTAGTGYELDAIAAVVLGGTSLSGGRGWIFGTLIGALLIGVLNNGLNLLGVSSFYQQV 294

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 295 IKGAVILLAVLL 306


>gi|238059607|ref|ZP_04604316.1| ABC branched-chain amino acid transporter permease component
           [Micromonospora sp. ATCC 39149]
 gi|237881418|gb|EEP70246.1| ABC branched-chain amino acid transporter permease component
           [Micromonospora sp. ATCC 39149]
          Length = 295

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 88/292 (30%), Gaps = 28/292 (9%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW---LLIPVSAMISGACGMIMGLPSL 115
             G + ++++        GAY+  +L      + W   + +PV+  ++GA G+++ +  +
Sbjct: 28  TFGQMNVINMAHGEFIMAGAYTTYVLQQTITSAGWSLLVALPVAFAVAGALGVLLEVLLI 87

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
           +          L+   +   +    + +         A  L     ++            
Sbjct: 88  RRLYARPLDTLLVTWGVSLMLQQAARDVFGSPNVQTRAPALLTGNVSLP----------G 137

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
            +       ++L        ++ L LR T +    R +  N+               + F
Sbjct: 138 GITVANNRLFILGLAVAAVVALTLALRLTPLGRRIRAVVQNRDLAAVSGIATARVDRTTF 197

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            V S   G+AG                 +  I    +V++GG+  L         L  + 
Sbjct: 198 FVGSGLAGVAGVALTLLGPI--GPTMGTNLIIDAFLVVVVGGIGQLKGSVIVAFALGVLQ 255

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                +                     ++ +A+   +  R   L  LRT S 
Sbjct: 256 ATGEYLTTLSVAK-------------VIVFVAIVAFLQWRPQGLFTLRTRSL 294


>gi|188532180|ref|YP_001905977.1| ribose ABC transporter permease protein [Erwinia tasmaniensis
           Et1/99]
 gi|188027222|emb|CAO95061.1| Ribose transport permease system protein [Erwinia tasmaniensis
           Et1/99]
          Length = 322

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 84/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  VV   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALVVLIAIVSSISPNFFTVGNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L      ++  +    A+ +    +   + +                     
Sbjct: 82  LTGAVAAKLVGLEVNALVAVAASLALGALIGAITGLIVAKGKVQ--------AFIATLVM 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L+          G                      F    +   + +   +  M  +  
Sbjct: 134 MLLLRGVTMVYTNGSP---------VNTGFNDNADLFGWFGIGRPLGIPTPVWLMAAVFL 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           ++   L  T +      +  N+ A      ++   KL  +++      +AG    A    
Sbjct: 185 AVWYMLHHTRLGRYIYALGGNEAATRLSGISVNRVKLIVYSLCGMLAALAGTIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +   +
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIMGTLIGALILGFLNNGLNLLGVSSYYQTI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|160935177|ref|ZP_02082560.1| hypothetical protein CLOBOL_00072 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441908|gb|EDP19605.1| hypothetical protein CLOBOL_00072 [Clostridium bolteae ATCC
           BAA-613]
          Length = 327

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 47/321 (14%), Positives = 101/321 (31%), Gaps = 25/321 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           KY+  + +  ++  LLL +   +  + + + ++  QI I V+ A G+++V+  LG + L+
Sbjct: 22  KYNGGIIIGLLIICLLLSVMTDSFCTVRNLSNIMRQISINVILACGMTMVI-ILGGIDLS 80

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+       L +  G+   + IP+S       G+  G    +       +     
Sbjct: 81  VGSVIAVSGCLCCGLITNVGVPSIIAIPISICAGTLVGVFNGFVISRTTIPPFIVT---- 136

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                        + N   G                L  F           I   Y+L+ 
Sbjct: 137 -----------LAMMNIGRGFARIYTKATTILVDDPLFTFIGSGKILGGVPIQFVYMLVV 185

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +      +     RT        + DN++A            ++ F +   F   AG   
Sbjct: 186 IVISGLIL----NRTKFGRNIYAVGDNKQAASYSGINSRRVTMTVFVIMGIFASCAGILS 241

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           +A       ++ + SE   + ++V     + GG+  LS       ++  +      +   
Sbjct: 242 SARTFSAQFNVGEGSEMDAISAVVLGGTSMSGGVGRLSGTIIGCIVIGVLNNGMNILGID 301

Query: 305 YFNSLLKFDCSFNMRHTTLMV 325
                +       +      +
Sbjct: 302 SSWQYVVKGVVVLIAVFIDYI 322


>gi|113869595|ref|YP_728084.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
 gi|113528371|emb|CAJ94716.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
          Length = 294

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 48/315 (15%), Positives = 110/315 (34%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y M + GL+++ G L +++      + +GA    +   
Sbjct: 3   IFGIPLPAMLSQLLLGLVNGAFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLAWMGME 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL+ W+++ +S ++  A G+++    L++      I  L+++     ++        G
Sbjct: 63  YAGLNYWIMLLLSPLVVAALGVVIEKTMLRWIYKLDHIYGLLLTLGITLVIEGIFRSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+  +      G T             F+I   +  +V++    +  +    + +T +
Sbjct: 123 VSGLPYSTPDALQGAT----------DLGFMILPNYRAWVVVASLVVCFATWYVIEKTKL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +   +  
Sbjct: 173 GAYLRAGTENPKMVEAFGVNVPLMVTLTYGFGVALAAFAGVLAAPVIQI--SPLMGQNLI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           IIV ++V++GGM S+         L  V  L                  +    +T++  
Sbjct: 231 IIVFAVVVIGGMGSIMGSILTGLGLGVVEGLTKVF--------------YPEASSTVVFF 276

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L+R   L  
Sbjct: 277 IMVIVLLLRPAGLFG 291


>gi|331001891|ref|ZP_08325412.1| hypothetical protein HMPREF0491_00274 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412214|gb|EGG91608.1| hypothetical protein HMPREF0491_00274 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 329

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 96/313 (30%), Gaps = 25/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + V+  +++ L      +   + S+  QI I    A G+++++  LG + L      
Sbjct: 23  IIGVLVILCVIVALATDKFLTPGNVISVLRQISINTYIALGMTLII-ILGHIDLAVGAIV 81

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+     V      G+ I + I     I    G+I G+   KFR     I   +M+    
Sbjct: 82  AMSGTLTVGFVVNQGMPIGVAIAAGIAIGILAGLIDGVVVSKFRVPAFIITMAMMNVC-- 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                         GI                         F I  + + Y+++ +   S
Sbjct: 140 -------------NGIAYVYSGGQSTRITDKFFIAIGTGYLFNIIPLPVVYMIILIAVFS 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +     +T        I  N++A       I   ++  F +S A    AG   A+   
Sbjct: 187 FLL----SKTKFGTYVYAIGGNREAARLSGVLIKKVEIIVFTLSGALAAFAGLVLASRMY 242

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P +    E   + + V     + GG   +S       ++  +      +    +  L
Sbjct: 243 SGQPSVGSGYEMDAIAACVLGGTSMAGGRGRISGTVFGAMVIGIISNGLNLIGVSSYWQL 302

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 303 IVKGLIIACAVVL 315


>gi|154245385|ref|YP_001416343.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154159470|gb|ABS66686.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 293

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 47/316 (14%), Positives = 107/316 (33%), Gaps = 28/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L +        +    I    Y M + GL+++ G L +++      Y +GA+   +L +
Sbjct: 4   LLGIPPQALFGQLLLGLINGAFYAMLSLGLAVIFGLLNVINFTHGAQYMMGAFGAWMLLN 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+  W  + +S +I    GM++    LK       +  L+++     IL        G
Sbjct: 64  YAGIPFWGALVLSPIIVAIIGMVIERTLLKRLYHLDHLYGLLLTFGLALILEGLFRRQYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+   + L                   F+    +  +V++    +  +    + RT +
Sbjct: 124 SSGLPYNNPLP------------GGTNLGFMFLPNYRAFVVVASLVVCIATWYVIERTKL 171

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
            +  R   +      +    +       +        +AG   A +           +  
Sbjct: 172 GSYLRAATERPDLVQAFGIDVPRMITLTYGFGVGLAALAGVLAAPAYQV--SPTMGSNLI 229

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+         L  V  L                  +    +T++ +
Sbjct: 230 IVVFAVVVIGGMGSIMGAIVTGFGLGIVEGLTKVF--------------YPEASSTVIFV 275

Query: 327 ALFLVILMRSHSLLRL 342
            + +V++++   L   
Sbjct: 276 IMAIVLMVKPAGLFGT 291


>gi|126464763|ref|YP_001045876.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
 gi|126106574|gb|ABN79104.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
          Length = 295

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 109/318 (34%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           ++    +        +    I    Y + + GL+++ G L +++      Y  GA++ ++
Sbjct: 1   MMTIFGIPTAALFGQLLVGLINGSFYALLSLGLAVIFGLLRVINFAHGAQYMAGAFAALL 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L ++ G+  W  + ++ +I G  G ++    L        +  L+ +      L      
Sbjct: 61  LLTQTGIGYWPALILAPLIVGLGGALIERTMLSRLYKLDPLYGLLFTFGLALTLEGTFRW 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G +G   +      G               F+   I+  +V++    +   + L + +
Sbjct: 121 FFGTSGQPYSPPAALTGA----------VNLGFMFLPIYRGWVVVASLAVCVGVWLLIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N     S    +       + + +A  G AG   A         +   
Sbjct: 171 TKLGAYLRAATENPVLVQSFGVNVPLLLTFTYGLGAALAGFAGVLAAPVYQV--SPLMGS 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  I+V ++V++GGM S+        +L     L                  +      +
Sbjct: 229 NLIIVVFAVVVVGGMGSILGAIVTGYLLGIAEGLTKVF--------------YPEASNIV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           + + + +V+++R   L  
Sbjct: 275 IFVIMAIVLILRPAGLFG 292


>gi|302870827|ref|YP_003839463.1| inner-membrane translocator [Caldicellulosiruptor obsidiansis OB47]
 gi|302573686|gb|ADL41477.1| inner-membrane translocator [Caldicellulosiruptor obsidiansis OB47]
          Length = 337

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 97/314 (30%), Gaps = 7/314 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + +   +++        S +    + +Q     + A G+S+V+   G + L+   A 
Sbjct: 16  IYFILLALIVVIAFISPDFLSWRCFRDILLQSSTRAIIALGMSLVL-ITGGVDLSAGRAV 74

Query: 75  AIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            + A     +L +      +        +     + M +  L    + +AI+ L +    
Sbjct: 75  GLAAVVSASMLQTADYARRFFPDLPQLPLIVPILIAMVITLLFGIINGVAISRLNLPPFI 134

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +               +          +R            +  E  + Y+L+    +
Sbjct: 135 ATLGSMVIIYGANSLYFNMPPNNSQPIGGLRPDFTNLGTGYIGISGEYSIPYILIIALIV 194

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  + + L +TA+  +   +  N  A       +    +  +A +    G+AG   AA  
Sbjct: 195 ALVVWVLLNKTALGKSIYAVGGNVNAARVSGINVTKVLIFVYAFAGLLYGLAGVLEAART 254

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              + +     E   + + V+      GG+ ++  +     I   +      +    +  
Sbjct: 255 GGATNNYGNMYELDAIAACVVGGVSTTGGIGTVPGVLAGVLIFGVINYGLTFIGVDPYWQ 314

Query: 309 LLKFDCSFNMRHTT 322
           L+       +    
Sbjct: 315 LIIKGLIIGVAVAL 328


>gi|39997104|ref|NP_953055.1| branched-chain amino acid ABC transporter permease [Geobacter
           sulfurreducens PCA]
 gi|39983994|gb|AAR35382.1| branched-chain amino acid ABC transporter, permease protein
           [Geobacter sulfurreducens PCA]
 gi|298506117|gb|ADI84840.1| branched-chain amino acid ABC transporter, membrane protein
           [Geobacter sulfurreducens KN400]
          Length = 288

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 91/289 (31%), Gaps = 13/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +   +Y +   GL+I+ G + +++        IG Y      S  G+  ++ I +
Sbjct: 8   LISGILIGGVYALIGIGLTIIFGVMRVINFAHGDIMMIGMYLTYNFFSLAGVDPFVSIAL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +    G I+    +      L    ++++     I+                     
Sbjct: 68  TIPLMFLFGAILQKTFINRVLGALPQNQILLTIGLGLIMSNTMMFIY-----------TS 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +      F    +     +    L    ++  +  +L +T    A R    +++
Sbjct: 117 DYKILTTSYSSSSFNIGTISISWPLAISFLITAAITLLLYWFLMKTDTGQAIRATAQDRE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    + AF + +A  G AGA  + +          F+       I +LGGM
Sbjct: 177 AAQLMGINVKRMSILAFGMGAALAGTAGALISPTYYIFPQIGSTFTL--KAFVITVLGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            S+        I+     L        +  ++ F     +       + 
Sbjct: 235 GSIVGATIGGVIIGVAESLGAVYISSGWKDVVVFVLFLLVLLFKPAGLL 283


>gi|11498988|ref|NP_070221.1| branched-chain amino acid ABC transporter, permease protein
           (braD-4) [Archaeoglobus fulgidus DSM 4304]
 gi|2649184|gb|AAB89857.1| branched-chain amino acid ABC transporter, permease protein
           (braD-4) [Archaeoglobus fulgidus DSM 4304]
          Length = 312

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 101/309 (32%), Gaps = 14/309 (4%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   + V+ + GL+I   +  + +         G+Y  + +   +G+  +  +PV+  +
Sbjct: 18  LIYSNLLVLLSIGLTITYITTAVPNFAQGSFAIFGSYVALTMLRLFGIHPYASLPVAFAL 77

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
            G  G+   +  L+      A   ++M       LI    I +    +    R      T
Sbjct: 78  GGLLGIATYILILRPLIRRGASVVILMIATLAFDLILLGIIGSYSETLATITRKSASKFT 137

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                      S+ +     +  ++L        ++  L +T    A R   +N      
Sbjct: 138 FIPTDFKMFSFSASLFVSSLVIIIVLAS------LVTLLYKTKFGVALRASMENPALAEV 191

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   + + +L ++ +S A   MAG       + +          + + +  I+GG++++ 
Sbjct: 192 MGVNVEYTRLFSWFLSGALAAMAGCLLPFKYEIV--PSTGAIIIVSIFASSIVGGLSTIY 249

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  I+              +     F     +    + ++ L   +++    L  +
Sbjct: 250 GALLGGYIIGFSETSVT------YALSSVFGTGVLLYGRVVSLLVLVATLILAPKGLTGV 303

Query: 343 RTPSNFLER 351
           +       R
Sbjct: 304 KWRRLLWSR 312


>gi|332289583|ref|YP_004420435.1| ribose ABC transporter permease protein [Gallibacterium anatis
           UMN179]
 gi|330432479|gb|AEC17538.1| ribose ABC transporter permease protein [Gallibacterium anatis
           UMN179]
          Length = 324

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 91/311 (29%), Gaps = 23/311 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G++ V+ + G + L+     A
Sbjct: 22  IIALLVLIAIVSSISPNFFTIDNLLNILRQTSVNAIIAVGMTFVILTAG-IDLSVGSILA 80

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +       ++  V    +   G+   + +                + F  
Sbjct: 81  LTGAVAASLVNMELSIFVVIPLVLLFGTLLGGISGVIVAK------------GKVQAFIA 128

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    + V        F      Y + + + +  M  +  
Sbjct: 129 TLVTMTLLRGVTMVYTDGRPISLGFSDVADQ-----FSFLGTGYLLGIPFPIWLMAIIFI 183

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L+ T I      +  N+ A       +   K+  +AVS     +AG    +    
Sbjct: 184 VAWYLLKHTPIGRYIYALGGNEAATSLSGINVDKVKIFVYAVSGLLATVAGLIVTSRLSS 243

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+     +GG   ++       I+  +      ++   +  ++
Sbjct: 244 AQPTAGVSYELDAIAAVVVGGTSLMGGKGRITGTLIGALIIGFLNNALNLLDISSYYQMI 303

Query: 311 KFDCSFNMRHT 321
                  +   
Sbjct: 304 AKSIVILLAVL 314


>gi|294853563|ref|ZP_06794235.1| branched-chain amino acid transport system permease [Brucella sp.
           NVSL 07-0026]
 gi|294819218|gb|EFG36218.1| branched-chain amino acid transport system permease [Brucella sp.
           NVSL 07-0026]
          Length = 332

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 104/279 (37%), Gaps = 14/279 (5%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+  +  L +       L  +  ++    +G       + ++  +I+   +    L +V 
Sbjct: 1   MTELTQPLPQTRHSYAGLIGIVAIIAASVVGWFLFPDNL-ALLTRIIAIALLVLSLDLVT 59

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           G  G+ +L     +  GAY   I  + +      L+  +  +     G++ G   L+  G
Sbjct: 60  GYCGIATLGHAALFGAGAYGAGIAAAHFGVTDPILMTVIGLLAGAVTGLVSGAVILRATG 119

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
               + ++ +  +F     K    T G  G+         G               F +Y
Sbjct: 120 LAQLVLSIAVVHLFHEAANKASGWTGGSDGLSGISPDPIFGI------------FEFDLY 167

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              +Y   + +  +S   + ++ R+      R ++++     ++  ++  A+L  + +S 
Sbjct: 168 GRTVYIYAVILLLISFIFLRYVVRSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISG 227

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  G+ GA  A S   +  D   F+ +   + +++LGG 
Sbjct: 228 AVAGIGGALNAISTQVVGLDSLSFTMSAEALVMLVLGGA 266


>gi|118443303|ref|YP_878667.1| ribose ABC transporter permease [Clostridium novyi NT]
 gi|118133759|gb|ABK60803.1| ribose ABC transporter, permease protein [Clostridium novyi NT]
          Length = 311

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 86/313 (27%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             L  +V  +++ +      +   I ++  Q+ +  + A G++ V+   G + L+     
Sbjct: 14  ALLGFLVLCVVMAILSPRFLTVPNIKNVLTQVSVNAIIAIGMTFVI-LTGGIDLSVGSTL 72

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AI       L          +I    +      +   + +                + F 
Sbjct: 73  AISGAVAATLIKANCSIFVAIIVAIIVGIIVGLVNGVVIAK------------GKIQAFI 120

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L                  +  LG              +  I  I +  V+    FL 
Sbjct: 121 ATLATMTVFRGVTQVYTNGTPVSKLGEAF-------GKIGNTEIIGIPLPVVITIAVFLV 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +L   R         +  N+ +           K+  + +S     ++G    +   
Sbjct: 174 AFYVLNETRC--GRYIYALGGNEDSARLSGINTTKMKMLVYVISGVTAAISGVVVTSRIG 231

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             S       E   + ++V     + GG  S++       I+  +      +N   +  L
Sbjct: 232 SASAIAGTGYELDAIAAVVLGGTSLAGGEGSIAGTIIGALIIGVLNNGLNLLNVSPYYQL 291

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 292 IVKGLVILLAVMV 304


>gi|73541094|ref|YP_295614.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72118507|gb|AAZ60770.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 342

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 111/320 (34%), Gaps = 27/320 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M + GL+++   +G+L+      Y +GAY          +  W  + +
Sbjct: 35  LLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAY--TVASKIGFWPALIL 92

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G ++    L+    Y  +A L+ +     ++ +   +  G         L  
Sbjct: 93  APLLVAFAGALVERFGLRAVHKYGHVAELLFTFGLAYLIEEGVKLVWG---------LAA 143

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + + +    F      +  +  +++L    +  +I L L RT I    +    + +
Sbjct: 144 VPYRIPAELDGPLFTVFTSSFPKYRAFMMLVSLGMLVAIYLVLTRTRIGLVIQAALTHPE 203

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    +  F   +A  G+AG         ++      +   IV  + ++GGM
Sbjct: 204 MVEALGHNVPRVFMMVFGGGAALAGLAGVIGG--NAFVTEPSMAAAVGSIVFVVAVVGGM 261

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR--------------HTTLM 324
            SL     A+ ++  +      ++            + +                   L 
Sbjct: 262 GSLVGAFIASILIGVLQTFAVTIDASLAGLFNSIGLAVSDATPFYSLWKLTVAQVAPVLP 321

Query: 325 VIALFLVILMRSHSLLRLRT 344
            + L L+++ R   L+  R 
Sbjct: 322 YLLLVLMLIFRPRGLMGTRE 341


>gi|28971617|dbj|BAC65300.1| membrane spanning protein [Pseudomonas fluorescens]
          Length = 305

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 98/307 (31%), Gaps = 15/307 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL++V G + +++L     Y IGAY    +    G     +    
Sbjct: 10  LNGLQFGLMLFLLAAGLTLVFGIMDMINLAHGSLYMIGAYLTATVAEASGSYFIGIPVAL 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
              +    ++      +              +    +L  +  I      + +   +  +
Sbjct: 70  VGTAIIGMVLEISLFRRLYRR----------DHLSQVLATFALILICNEAVRMIWGVQPI 119

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
             +  ++          + Y      ++     ++ S+   + +T +    R    N++ 
Sbjct: 120 PLSTPAVFSRPIELIPGLHYSAQRLMIIGVGLVVAISMYFLVAKTRLGMWVRAGASNREM 179

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             ++   I +     F V +A   +AGA                S  I+   +V++GG+ 
Sbjct: 180 ATTMGVNIKWLFTVVFGVGAALCALAGAMLGPLLAV--QVGMGESILILAFVVVVIGGIG 237

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT---TLMVIALFLVILMRS 336
           S+        ++  V  L   +        L    + ++       ++ + +  V+  + 
Sbjct: 238 SIRGAFVGALLIGAVDTLSRSLLPLLLGKFLSPSVTSSIGAAVASIIIYVLMAAVLFWKP 297

Query: 337 HSLLRLR 343
             L   R
Sbjct: 298 QGLFPAR 304


>gi|260428340|ref|ZP_05782319.1| branched-chain amino acid ABC transporter, permease protein
           [Citreicella sp. SE45]
 gi|260422832|gb|EEX16083.1| branched-chain amino acid ABC transporter, permease protein
           [Citreicella sp. SE45]
          Length = 429

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 94/270 (34%), Gaps = 21/270 (7%)

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
             PV  +++     ++G  +L  R DYLAIATL ++EI   ++     +  G   +    
Sbjct: 160 AWPVGGLLAAGVAWVIGKTALGLRSDYLAIATLGIAEIIIAVMKNEDWLARGVKNVIGLP 219

Query: 155 RLYFLGTTVR---------SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           R       ++           +      +S +  ++    +   +  +   +      + 
Sbjct: 220 RPVPYEVDLQASSSFVETAGSLGLDATTASTLFVKLGYSVLFTVVLVVLLVLAQLALNSP 279

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS- 264
                R IRDN++A  ++   +    L  F + SA  G+AGA       +++P  ++   
Sbjct: 280 WGRMMRAIRDNEEAAEAMGKDVTARHLQIFILGSALCGIAGAMMTTLDGQLTPSSYQPLR 339

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR----- 319
              +V  +VI+GG  +         ++  +      +  +    +       +       
Sbjct: 340 YTFLVWVMVIVGGSGNNLGAVLGGFLIWFLWVQVEPIGQWVMGIVTSGMADGSAIKAHLL 399

Query: 320 ------HTTLMVIALFLVILMRSHSLLRLR 343
                     M + L LV+      LL  R
Sbjct: 400 DSVQHMRLLTMGVILLLVLRFAPRGLLPER 429



 Score = 41.4 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 36/92 (39%), Gaps = 2/92 (2%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            + L L A+V  L++   +  + +      +    L+  + A G+++  G  GL ++  +
Sbjct: 1   MRTLGLFALVAALIIATGVLQSWNSA--LIILNMGLVSAIMALGVNLQWGLAGLFNVGVM 58

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
              A+G  + V+         W       + +
Sbjct: 59  GFVALGGLAVVLTSVAPVPEAWAAGGWRIIAA 90


>gi|269793458|ref|YP_003312913.1| monosaccharide ABC transporter membrane protein [Sanguibacter
           keddieii DSM 10542]
 gi|269095643|gb|ACZ20079.1| monosaccharide ABC transporter membrane protein [Sanguibacter
           keddieii DSM 10542]
          Length = 336

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 94/312 (30%), Gaps = 28/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V  L+LF+      +   + ++G+Q     + A+G++ V+   G + L+     A
Sbjct: 38  FIGLLVLCLVLFILTPNFLTYGNLLNVGVQASTIAVMAFGMTFVI-VAGGIDLSVGSVAA 96

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + +   L  WL +    +     G + G      +                 
Sbjct: 97  LSGMLSAWMFATADLPGWLALVGGLLTGLVAGAVSGFAVAYGKLPAFI------------ 144

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                         +    R   L  +    IR     S      + +   ++ +     
Sbjct: 145 ----------ATLAMLSVARGLTLVISDGRPIRTSPAVSWLGSDVLGVPVPIIVLAVAGI 194

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              + L RT I  +   +  N++A       +    ++ FA+S  F  +AG   A   D 
Sbjct: 195 VTAVILNRTVIGRSMYAVGGNEEAARLSGIPVKRVLVTVFALSGLFAALAGMLIAGRLDS 254

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++VI      GG+   S       IL  +      +    F   +
Sbjct: 255 AQPQAASGYELDAIAAVVIGGASLSGGVGRASGTLVGALILAVIRNGLNVLGVSSFWQQV 314

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 315 VIGLVIALAVLV 326


>gi|152997219|ref|YP_001342054.1| inner-membrane translocator [Marinomonas sp. MWYL1]
 gi|150838143|gb|ABR72119.1| inner-membrane translocator [Marinomonas sp. MWYL1]
          Length = 285

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 98/303 (32%), Gaps = 27/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     +IY + + GL+I+ G L  ++      Y +GAY           + WL + ++
Sbjct: 9   LNGIGLGMIYFLISVGLTIIFGLLNFVNFAHGAFYLLGAYVSY-TAVSVTGNYWLALVIA 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +       I     +K          ++++     I+ +      G  G  ++      
Sbjct: 68  PISIAIIAWICERTLIKRVYHLPHTYQILVTLGVALIIQEVCISIWGPIGKNISPPDSLK 127

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G           F      Y  +  +V+     ++  +   L +T      R   ++ + 
Sbjct: 128 GV----------FQFGNFFYPEYRLFVIAFSALVALLVWFLLDKTKFGALVRAGSEDAEM 177

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L T         FA+     G+AG   A  R        +     I   +V++GGM 
Sbjct: 178 VSLLGTHTHRLFSITFALGVGLAGLAGVLAAPIRGVTPFVGPEILG--IAFVVVVIGGMG 235

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S +       ++  V  +   +              +    + ++  A+  VIL+R + L
Sbjct: 236 SFTGALVGGLLVGLVQSMMTTI--------------WPQGSSLMIYGAMAFVILLRPYGL 281

Query: 340 LRL 342
              
Sbjct: 282 FGR 284


>gi|15828816|ref|NP_326176.1| xylose ABC transporter permease protein [Mycoplasma pulmonis UAB
           CTIP]
 gi|14089759|emb|CAC13518.1| XYLOSE ABC TRANSPORTER PERMEASE PROTEIN [Mycoplasma pulmonis]
          Length = 638

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 86/301 (28%), Gaps = 12/301 (3%)

Query: 10  KYDKILCLLAVVYPLLL---FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +   +L  ++V+    +   F    +      I ++     I  +       ++G   + 
Sbjct: 313 QLLSLLGAISVIIYNGVSRTFSNNSSLGGLYLIITLIGTAFIGALIGISQGFLIGYFKIP 372

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S        +G        + + + +  + P     S     I+        G +  I+ 
Sbjct: 373 SF----IVTLGGMLIFKGLALFAVPLNNITPEGGSQSAYVRAIIRTIFDVQVGGFYIISF 428

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           LI       I++      N K    +     F+      +I  F     +   +I + + 
Sbjct: 429 LIFIVSLALIVLFLVYGRNKKIKFGLLVDSGFVFWLKIVVISVFMILLGYAFGKIGVKWY 488

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           LL +  L    +   + T        I  N+K+       +       F ++   + +A 
Sbjct: 489 LLYIMILLVIFVFLTQNTVFGRKVYAIGGNKKSAELSGIDVRKTTTLIFMINGIMVAIAS 548

Query: 247 AFFAASRDRISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
             F       +             ++ V    + GG+ +         IL  +      +
Sbjct: 549 IIFTGIVTSATATAGEGFELDVISSVFVGGASMAGGIGTTIGTLIGGFILGFINNGILLL 608

Query: 302 N 302
            
Sbjct: 609 A 609


>gi|117618883|ref|YP_856834.1| ribose ABC transporter permease protein [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|117560290|gb|ABK37238.1| ribose ABC transporter, permease protein [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
          Length = 321

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/312 (8%), Positives = 85/312 (27%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LVALLVLIGVVSFLSPNFFTADNLLNILRQTSVNAIMAVGMTLVILTAG-IDLSVGSVLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + +       ++       +   G+   + +                + F  
Sbjct: 82  LCGALAATMVAMELPIALVIPLTLGAGALLGGISGLIIAK------------GKVQAFIA 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +          F      Y   +   +  M  +  
Sbjct: 130 TLVTMTALRGVTMVYTEGRPISTGFSDGADH-----FAWLGTGYLFGLPVPIWLMAIVFL 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L  T +      +  N+ A       +   KL+ + +      +AG    +    
Sbjct: 185 LAWFMLNHTRLGRYIYALGGNESATRLSGINVDRVKLAVYGLCGMLSALAGLIVTSRLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     ++GG   +        I+  +      ++   +  ++
Sbjct: 245 AQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 AKASVILLAVMI 316


>gi|227828703|ref|YP_002830483.1| inner-membrane translocator [Sulfolobus islandicus M.14.25]
 gi|227460499|gb|ACP39185.1| inner-membrane translocator [Sulfolobus islandicus M.14.25]
          Length = 348

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 56/350 (16%), Positives = 114/350 (32%), Gaps = 50/350 (14%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV------------- 82
              I ++ +   +Y+M    L++ +G  G+ +   V+AYA GA+                
Sbjct: 6   SSLILAIVLDFSVYLMVVISLNVEIGLTGVPNFGRVLAYAGGAFIAGAIPGRILQLIYGL 65

Query: 83  --------------------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
                                        + L + ++ ++  A G I   P+L+ R DYL
Sbjct: 66  HSDYILNNPSVIAEINDKLLQQPLMALAILILTLILAGIVGAALGYISSYPALRLREDYL 125

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
            I  L+       I I + PI  G  G+ V                F             
Sbjct: 126 GILLLVAGTSLVVIGITYPPIVGGTVGVQVPA-------------VFNALLGQGSSLYYK 172

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +  VLL    +   +      + +  A+R +R+N+     L   I   +  A A+     
Sbjct: 173 ISIVLLAFSLVMLLLFNLTSNSPMGRAFRAVRENEDLVEVLGRDIGVIRGKAMALGGFLA 232

Query: 243 GMAGAFFAASRDRISPDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
           G+AG+ +A     +    F   + +     +++LGG  +         I   +  +   +
Sbjct: 233 GIAGSLYAFYIGSVFAGAFDNLTWSFNPYLMLVLGGAGTSIGAMLGALIYSTLYHV---I 289

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           + Y                  L  + L +++++R   ++  +       +
Sbjct: 290 DLYKQTIGYYLHFDAVWLQYMLFGLILTIILIIRPQGIVVEKAKPLVKPK 339


>gi|153811818|ref|ZP_01964486.1| hypothetical protein RUMOBE_02211 [Ruminococcus obeum ATCC 29174]
 gi|149832221|gb|EDM87306.1| hypothetical protein RUMOBE_02211 [Ruminococcus obeum ATCC 29174]
          Length = 327

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 96/304 (31%), Gaps = 18/304 (5%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M     ++     ++ +  V   + +          + + ++   +    + A G++I++
Sbjct: 7   MKAMIKQMQSVIALVIIFVVASTICIKDGRNNFLDIRNLMNVLRAVSENGIIAIGMTIIL 66

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
             LG + L+      + +     L  + GL     I VS  I    G+  GL   K R  
Sbjct: 67  -ILGDIDLSVGSVVGLISTGCAYLMVKSGLGFVPAILVSLGIGALFGLFNGLCITKLRLQ 125

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
                TL    I + +   W             + +      V  +  +   P   +I+ 
Sbjct: 126 AFI-VTLASMNIARGLARFWANGIGIPLAYGKGEGMAPPAFEVLQMRLWGIIPVPAIIFI 184

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           + +    + +            +T        I  N+ A +     +   K+ AF + + 
Sbjct: 185 VLLIVFQIILS-----------KTRFGRQVYAIGGNKNAAYLSGIKVDRIKIYAFMICAM 233

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVV 295
              +A    AA   +  P+  +  E   V +  I      GG  ++        IL  + 
Sbjct: 234 LSSVAAMIHAAQISQGGPNEGQGYELNAVAACAIGGTSLAGGKGTVFGTLIGALILGMLD 293

Query: 296 ELCC 299
            +  
Sbjct: 294 NVLG 297


>gi|221369307|ref|YP_002520403.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131]
 gi|221162359|gb|ACM03330.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131]
          Length = 295

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 45/318 (14%), Positives = 109/318 (34%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           ++    +        +    I    Y + + GL+++ G L +++      Y  GA++ ++
Sbjct: 1   MMTIFGIPTAALFGQLLVGLINGSFYALLSLGLAVIFGLLRVINFAHGAQYMAGAFAALL 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L ++ G+  W  + ++ +I G  G ++    L        +  L+ +      L      
Sbjct: 61  LLTQTGIGYWPALILAPLIVGLGGALIERTMLSRLYKLDPLYGLLFTFGLALTLEGTFRW 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G +G   +      G               F+   ++  +V++    +   + L + +
Sbjct: 121 FFGTSGQPYSPPAALTGA----------VNLGFMFLPVYRGWVVVASLAVCLGVWLLIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N     S    +       + + +A  G AG   A         +   
Sbjct: 171 TKLGAYLRAATENPVLVQSFGVNVPLLLTFTYGLGAALAGFAGVLAAPVYQV--SPLMGS 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  I+V ++V++GGM S+        +L     L                  +      +
Sbjct: 229 NLIIVVFAVVVVGGMGSILGAIVTGYLLGIAEGLTKVF--------------YPEASNIV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           + + + +V+++R   L  
Sbjct: 275 IFVIMAIVLILRPAGLFG 292


>gi|145593320|ref|YP_001157617.1| inner-membrane translocator [Salinispora tropica CNB-440]
 gi|145302657|gb|ABP53239.1| inner-membrane translocator [Salinispora tropica CNB-440]
          Length = 328

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/319 (14%), Positives = 99/319 (31%), Gaps = 17/319 (5%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
             R  +      L A+    L+           Y+ ++    L+  + A    ++VG  G
Sbjct: 13  PDRRARRLPRWSLPALGALGLVAAVTLPWLVNGYVIALAATALVMAVLAMSAQLLVGWAG 72

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           L  L       +GAY+   + +   L    L+  +A  + A  +   L        +L +
Sbjct: 73  LSPLGQAGYLVVGAYTAASVATLTNLGPVQLLAATAAGAIAAAVTGCLAVRARGIPFLMV 132

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
                           +    G  G + +  +                    ++   ++Y
Sbjct: 133 T---FGLGELVHAAANQWAPGGSEGTHTSPVVALP-------------GLPAMVRPGWVY 176

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +L    +    +  L RT  +   R I  ++    +         L+A+ ++    G 
Sbjct: 177 LYVLACTLVVGVAVAILVRTRFALLLRGIAAHEPRVQAAGHHTNRLLLAAYTIAGGIAGA 236

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA   A    +SP       + + ++  ++ G  S+        +L+   +   G+   
Sbjct: 237 AGALTIAVTRYVSPADAAMGVSALALAAALI-GSGSMLGAGAGAVLLVAARDWASGLLGG 295

Query: 305 YFNSLLKFDCSFNMRHTTL 323
           +  +LL            L
Sbjct: 296 HGPTLLGLCFLLLAYLPRL 314


>gi|288958250|ref|YP_003448591.1| inner-membrane translocator [Azospirillum sp. B510]
 gi|288910558|dbj|BAI72047.1| inner-membrane translocator [Azospirillum sp. B510]
          Length = 295

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/318 (13%), Positives = 105/318 (33%), Gaps = 26/318 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    I    Y + + GL+++ G L +++      Y +GA+   +L +
Sbjct: 4   IFGIPPQALFGQLLLGLINGSFYALLSLGLAVIFGMLNVINFAHGALYMMGAFVAWLLLT 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
           ++G+  W  + V+ +I G  G+++    L        +  L+++     I+        G
Sbjct: 64  QFGIGYWPALLVAPLIVGLFGVVLERTLLSRLYKLDHLYGLLLTFGLALIVEGAFRHQYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G                          F+    +  +V++    +  S  L + +T +
Sbjct: 124 VSGQPYPIP----------DALRGGQNLGFMFLPNYRGWVVVASLVVCVSTWLAIEKTKL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N     +    +       +A   A  G+AG   A         +   +  
Sbjct: 174 GAYLRAATENPVLVQAFGINVPRMVTLTYAFGVALAGLAGVLAAPIYQV--SPLMGSNLI 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+                     +            +      ++ +
Sbjct: 232 IVVFAVVVIGGMGSILGAV--------------LTGYGLGLLEGLTKVFYPEASNIVVFV 277

Query: 327 ALFLVILMRSHSLLRLRT 344
            + +V++++   L     
Sbjct: 278 IMAVVLMIKPAGLFGRER 295


>gi|253998410|ref|YP_003050473.1| urea ABC transporter permease UrtB [Methylovorus sp. SIP3-4]
 gi|313200485|ref|YP_004039143.1| urea ABC transporter permease urtb [Methylovorus sp. MP688]
 gi|253985089|gb|ACT49946.1| urea ABC transporter, permease protein UrtB [Methylovorus sp.
           SIP3-4]
 gi|312439801|gb|ADQ83907.1| urea ABC transporter, permease protein UrtB [Methylovorus sp.
           MP688]
          Length = 305

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 91/301 (30%), Gaps = 19/301 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++ A GL+I+ G +G++++       IGAY+ V+L        ++       I
Sbjct: 21  LSMFSVLLLMALGLAIIFGQMGVINMAHGEFMTIGAYTTVMLSKLAVAYGFVNYYFIFAI 80

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
             A  +   +           +   +       +L  W      +     +     +   
Sbjct: 81  IVAFVLAFAIGY----LVEFTLIRHLYKRPLDTLLATWGLSLVMQQIFRSSFGAKEVSAE 136

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +     P+  +   I   +V+     ++  + L++ R+      R    N+    +
Sbjct: 137 LPEWLLGSFQPTPDIDIPINGVFVMGLAAVVTFGVFLFMFRSQWGLRVRATVQNRVMAGA 196

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           FA+     G+AGA F       +         +    +V+ GG  SL 
Sbjct: 197 VGINTKKVDRVTFALGCGIAGVAGAAFTTIAS--TGPTTGTLYIVDSFMVVVFGGAASLF 254

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +     +           +                + +  +++MR   L   
Sbjct: 255 GTIASAFGIAQAQSILQFFMTSSMGKVATL-------------LTIVGILMMRPEGLFAS 301

Query: 343 R 343
           +
Sbjct: 302 K 302


>gi|294677393|ref|YP_003578008.1| branched-chain amino acid ABC transporter permease LivH
           [Rhodobacter capsulatus SB 1003]
 gi|294476213|gb|ADE85601.1| branched-chain amino acid ABC transporter, permease protein LivH-1
           [Rhodobacter capsulatus SB 1003]
          Length = 335

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/311 (9%), Positives = 78/311 (25%), Gaps = 18/311 (5%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIG---------AYSYVILGSRYGLSIWLLIPVS 99
             + A G++++ G L   +       A G               +      +  L +P  
Sbjct: 25  LALGALGVTLIYGILRFSNFAHGDTMAFGTGLTILVTWGLQSAGISFGPLPTALLALPFG 84

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             ++ A  +        +     A    I       + +             +       
Sbjct: 85  IALTAAMVLATDRVVYSYYRKVRAAPIYITMVSVGVMFVMNGLTRVLIGVDEIKFADGAR 144

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                +  +     +  +         ++    +  ++  +L +T    + R   DN+  
Sbjct: 145 FLISAADFKAATGLTEALAIRGSTAITVITAGLVVWALFWFLAKTRTGKSMRAYADNEDL 204

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                          + +++A   +AG  +   +         F   + + +  I+GG+ 
Sbjct: 205 ALLSGIDPNRVVAVTWVIAAALATIAGTLYGLDKSF--KAFNYFQLLLPIFAAAIVGGLG 262

Query: 280 SLSKIAKATAILIGVVELC-------CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           S         ++                     +                +    L +V+
Sbjct: 263 SPLGAIAGGFVIAFSEVSITYAWKKVAMYLIPGYEPEGLLQLLSTEYKFAVSFAILIIVL 322

Query: 333 LMRSHSLLRLR 343
           L +   L + +
Sbjct: 323 LFKPTGLFKGK 333


>gi|296128562|ref|YP_003635812.1| urea ABC transporter, permease protein UrtB [Cellulomonas flavigena
           DSM 20109]
 gi|296020377|gb|ADG73613.1| urea ABC transporter, permease protein UrtB [Cellulomonas flavigena
           DSM 20109]
          Length = 294

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 87/291 (29%), Gaps = 27/291 (9%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI--WLLIPVSAMISGACGMIMGLPSLK 116
             G +G++++        GAY+  +L      +    L+      + G    ++   +L 
Sbjct: 28  TFGQMGVINMAHGEFMMAGAYTAFVLQWFVPDAGVSLLVALPVGFVVGGLLGLLLEVTLI 87

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
            R     + TL+++     +L +      G   + V    +  G                
Sbjct: 88  SRMYRRPLDTLLVTFGVALVLQQLARDVFGAPNVDVRAPAWLSGA----------VQVLG 137

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
           +       ++L        ++ L L+ T +    R    N+    +   +        F 
Sbjct: 138 MNLPKTRLFILALAIVCVLALSLVLKLTPLGRRIRATVQNRDLAETSGVSTRATDRLTFF 197

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           V S   G+AG                 +  +    +V++GG+  L     A   L  +  
Sbjct: 198 VGSGIAGVAGVALTLLGSI--GPTLGTNYIVDAFLVVVVGGIGQLKGAVIAAFSLGLLQA 255

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                             +       L+ + +   + +R   L+ +RT S 
Sbjct: 256 TFEY-------------STTASLAKVLLFVVIVAFLQVRPQGLVAVRTRSL 293


>gi|296119982|ref|ZP_06838536.1| ribose ABC transporter, permease protein [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295967136|gb|EFG80407.1| ribose ABC transporter, permease protein [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 329

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 91/311 (29%), Gaps = 30/311 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +     ++GIQ     + A+G++ V+ + G + L+     
Sbjct: 31  ALVGLIILCVALFIATPHFLTVNNFLNIGIQAATVAILAFGMTFVIITAG-IDLSVGSVA 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GA       +   +  WL +    +     G I G+ +   +         +MS    
Sbjct: 90  ALGAMVSASFFTDVNMPGWLTLIAGLLTGLLAGAICGIATAYGKIPSFIATLAMMSIARG 149

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+       G A                                  +   ++ M    
Sbjct: 150 ATLVISDGSPIGTAPTVNW----------------------LGSTVAGIPIPIVMMVIAG 187

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N +A       +   ++  F +S  F  +AG   A    
Sbjct: 188 LICWFILERTVLGRSMYAIGGNLEAARLSGLPVKRIQIIVFGLSGLFAALAGLVMAGRLS 247

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              P        +  I+ V++GG          +       +L  +      +N   F  
Sbjct: 248 SAQPQA-GVGYELDAIAAVVIGGASLAGGQGRATGTLVGALLLAVIRNGLNLLNVSSFWQ 306

Query: 309 LLKFDCSFNMR 319
            +       + 
Sbjct: 307 QIVIGLVIALA 317


>gi|86750276|ref|YP_486772.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86573304|gb|ABD07861.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 291

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 93/265 (35%), Gaps = 12/265 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+++ G L +++      Y +GA+    L + +G+  W  + +
Sbjct: 12  LLVGLINGSFYALLSLGLAVIFGMLNIINFAHGALYMMGAFCAYFLLNLFGIGYWWALIL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I GA GM+M    L++      +  L+++     I+        G +G+  A     
Sbjct: 72  APLIVGAFGMLMERTLLQWLSGLDHLYGLLLTFGVALIIQGLFQNYFGSSGLPYAIPDEL 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G               F+   I+  +V+     +       + RT +    R   +N  
Sbjct: 132 RG----------GVNLGFMYLPIYRGWVVAFSLVVCLLTWYLIERTRLGANLRAATENPT 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       + +      +AG   A         +      I+V ++V++GGM
Sbjct: 182 LVRAFGINVPRMITLTYGLGVGLAALAGVLSAPINQV--RPLMGADLIIVVFAVVVIGGM 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNF 303
            S+         L  +  L      
Sbjct: 240 GSIMGSIITGFALGVIEGLTKYFYP 264


>gi|51891843|ref|YP_074534.1| branched-chain amino acid ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
 gi|51855532|dbj|BAD39690.1| branched-chain amino acid ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
          Length = 297

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 109/311 (35%), Gaps = 24/311 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
           G       + +  +   +Y + A G  ++  + G+++L       +GAY  +   +   L
Sbjct: 4   GLGFFLNLLVNGIVVGALYALVALGFVLIYKASGVINLAQGELVLLGAYIGLTFTTELNL 63

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              L + ++  +S   G+ +    L+       I+ ++++     ++        G    
Sbjct: 64  PFALALLLTIAVSALVGVAIERAVLRPFIGEPPISIIMVTMGLSFLIKAVIHGIWGTDMR 123

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                        + L R        V       + L+    L   +  + + + +  A 
Sbjct: 124 S-----------FQGLFRSEPIVIGPVAISEVFLWGLVAALILLVLLNAFFKYSLLGIAM 172

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   D+++A  S+  ++     + +AV++    + G F     +    +    S  + V+
Sbjct: 173 RATADDEQAALSMGISVKRVLAATWAVAAMVAAVGGIFLG---NIAGVNPLLTSYGLKVL 229

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            + ILGG+ S+        ++  +  L  G    Y   +             +  + + +
Sbjct: 230 PVAILGGLDSIPGAILGGFLIGILEALTGGYLDQYLTGI----------KEVVPFVVMIV 279

Query: 331 VILMRSHSLLR 341
           ++L+R + L  
Sbjct: 280 ILLIRPYGLFG 290


>gi|256810447|ref|YP_003127816.1| inner-membrane translocator [Methanocaldococcus fervens AG86]
 gi|256793647|gb|ACV24316.1| inner-membrane translocator [Methanocaldococcus fervens AG86]
          Length = 345

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 58/332 (17%), Positives = 113/332 (34%), Gaps = 50/332 (15%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW------------ 93
             IY + +  L++  G  G+ +    ++  +GA +   + +R  +  +            
Sbjct: 13  FGIYYIVSLSLNMEFGYAGIPNFGKALSVLVGAIAVGGILNRLLMLYYGVGGGLIEGSTY 72

Query: 94  ---------------------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
                                L I +++++    G I  LPS K + DYL +  L +SE 
Sbjct: 73  ATSMINDLIASNPIVGIGILILTIILASILGFIVGAIFILPSAKLKEDYLGVTLLAISET 132

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
              +      I  G  G+   D L F+    R                     ++L + F
Sbjct: 133 VFLVCTYNLNIIGGYYGVSTPDILAFVSGEYRGW---------------VFTGIVLFIAF 177

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L+      L  T      R +R+N+    +    I+  ++   A+ SA   +AGA ++  
Sbjct: 178 LAYLFFERLLNTPFGRILRAMRENEDTVKAFGRDIMRLRIKTVAIGSAVGAIAGALYSLY 237

Query: 253 RDRISPDMFKFSEN-IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
              I  + F   E       +++LGG  +   +A      + V  L   +  Y     L 
Sbjct: 238 TVNIVANAFTRVEWTFFPFLMILLGGKGNNKGVALGVLCYVIVKVLL-DVYKYNLKYSLN 296

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                      L  + + L++  +   L+  +
Sbjct: 297 IPFEPVWLSYMLFGVLMLLILYYKPSGLIPEK 328


>gi|77465299|ref|YP_354802.1| ABC branched-chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|77389717|gb|ABA80901.1| ABC branched-chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
          Length = 295

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 109/318 (34%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           ++    +        +    I    Y + + GL+++ G L +++      Y  GA++ ++
Sbjct: 1   MMTIFGIPTAALFGQLLVGLINGSFYALLSLGLAVIFGLLRVINFAHGAQYMAGAFAALL 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L ++ G+  W  + ++ +I G  G ++    L        +  L+ +      L      
Sbjct: 61  LLTQTGIGYWPALILAPLIVGLGGALIERTMLSRLYKLDPLYGLLFTFGLALTLEGTFRW 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G +G   +      G               F+   I+  +V++    +   + L + +
Sbjct: 121 FFGTSGQPYSPPAALTGA----------VNLGFMFLPIYRGWVVVASLAVCLGVWLLIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N     S    +       + + +A  G AG   A         +   
Sbjct: 171 TKLGAYLRAATENPVLVQSFGVNVPLLLTFTYGLGAALAGFAGVLAAPVYQV--SPLMGS 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  I+V ++V++GGM S+        +L     L                  +      +
Sbjct: 229 NLIIVVFAVVVVGGMGSILGAIVTGYLLGIAEGLTKVF--------------YPEASNIV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           + + + +V+++R   L  
Sbjct: 275 IFVIMAIVLILRPAGLFG 292


>gi|148255478|ref|YP_001240063.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. BTAi1]
 gi|146407651|gb|ABQ36157.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 309

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 72/328 (21%), Positives = 128/328 (39%), Gaps = 38/328 (11%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  +    ++   +  T    Y+  +        +FA    ++ G  G ++        +
Sbjct: 9   LFWIGALTVIVALVLPTYVSGYVLGLLTVAYYTAVFAMSWDLLFGFAGEVNFGPTFLIGV 68

Query: 77  GAYSYVILGSRYGL--SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           GAY+  IL + +    SIWL I   A+ +   G+++ LP+L+  G Y  + TL+   + Q
Sbjct: 69  GAYTAGILDAHFSPGLSIWLCIAAGALAAVVGGVVLALPALRVSGPYFGLTTLVAVLMLQ 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           N ++    +T G+ G+ V D +     T                     Y++ LG   +S
Sbjct: 129 NFIVVAAGLTGGEIGLAVPDVISIDAKT--------------------NYWIALGFMLVS 168

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +I+  L R+AI    +    ++    +L   +   KL+AF VS+ F G+AGA       
Sbjct: 169 GAILFGLSRSAIGLILQASGQDKIQAGALGFNVTKHKLAAFVVSAFFSGLAGALMVFYMG 228

Query: 255 RISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             S   F      + +I   +LGG  ++   A     LIG+ EL   +            
Sbjct: 229 TASVSTFVDVGVGVQIIIAAVLGGRRTVIGAAIGAIFLIGMGELLRPLGE---------- 278

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  T ++ +   +VIL      L 
Sbjct: 279 -----LATLIVSVIALVVILFFPDGFLG 301


>gi|330960064|gb|EGH60324.1| inner-membrane translocator [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 262

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 70/270 (25%), Gaps = 14/270 (5%)

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            Y I AY   I  +          P   + +    +++                   + +
Sbjct: 1   MYMISAYLAAIGLAVLSFFGVESFPFLILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRL 60

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
              I      +                  T+      F   S FV       ++L+    
Sbjct: 61  APLISAIGISLILQNYAQISQGARQQGVPTLLEGAWRFEVGSGFVQITYTKIFILIAAFV 120

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               +   ++ T +    R  + ++K    L           F + +A   +AG     +
Sbjct: 121 GMGVLTYIIKYTKLGRMCRATQQDRKMASILGINTDRVISYVFIIGAAMAALAGVLITMN 180

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
                     F   I   +  +LGG+ SL        IL        G+    +  +  F
Sbjct: 181 YGTFDFYA-GFIIGIKAFTAAVLGGIGSLPGAMLGGLILGVAESQFSGLINSDYKDVFSF 239

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                          L L+++ R   LL  
Sbjct: 240 G-------------LLVLILIFRPQGLLGR 256


>gi|283580606|gb|ADB27960.1| RbsC [Bifidobacterium breve UCC2003]
          Length = 335

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 44/296 (14%), Positives = 89/296 (30%), Gaps = 28/296 (9%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
              A  +   + ++GIQ     + A+G + V+   G + L+     A+ +      G+  
Sbjct: 50  ATPAFLTGPNLLNVGIQAATVAILAFGQTFVIVEAG-IDLSVGSVAAVSSMLVAYTGASM 108

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           GL   L I V  +     G + G+ +   +                              
Sbjct: 109 GLPPILTIVVGLVTGAVFGALSGIANAFLKLPSFI----------------------ATL 146

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
            +    R   L  +    +      + F    + +   ++ M  +     + L  T+I  
Sbjct: 147 AMMSVARGLTLVISDGRPVSTSGMVNFFGSTVLGIPIPIVMMIIMGVIASVILNFTSIGR 206

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           +   +  N +A      ++   ++  F +S  F  +AG   A       P      E   
Sbjct: 207 SMYAVGGNMEASRLSGISVHKTQIMVFVLSGIFAAVAGLVIAGRLHSAQPQAASGYEMDA 266

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           + S+VI      GG   +S       +L  +      +N   F   +         
Sbjct: 267 IASVVIGGASLSGGKGKISGTFIGAILLAVIRNGLNILNVSSFWQQVVIGLVIAFA 322


>gi|251794593|ref|YP_003009324.1| urea ABC transporter permease UrtB [Paenibacillus sp. JDR-2]
 gi|247542219|gb|ACS99237.1| urea ABC transporter, permease protein UrtB [Paenibacillus sp.
           JDR-2]
          Length = 301

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/289 (10%), Positives = 75/289 (25%), Gaps = 17/289 (5%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
             G + ++++       IGAYS  +  + +   +   +             +        
Sbjct: 28  TFGLMKVINMAHGELIMIGAYSTYLTQNMFKDYLPKSMFDWYFALAIPVSFLIAFLFGLI 87

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
            +   I  L    +   +      +   +    +        T                +
Sbjct: 88  LEMSLIRFLYGRPLDSLLATWGVGLVLQQLARSIFGAPNVAVT--SPTWLDGGVSFLGAV 145

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                 +++  +     ++  ++ R+      R +  N+     L  +        FA+ 
Sbjct: 146 LPYKRLFIIGLVIVTLLAMYFYIYRSLEGRRMRAVMQNRDMAACLGVSTRRVDAMTFAIG 205

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           S   G+AG   A +              +    +V+LGG+  L         +     + 
Sbjct: 206 SGIAGIAGC--ALTLIGPIGPSLGTYYIVDAFMVVVLGGVGKLVGTVLGALGIGVFNTMF 263

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                                   L+ I +   +  R    + +R+ S 
Sbjct: 264 EYWTNASLGK-------------VLVFICIVAFLQWRPMGFVAMRSRSL 299


>gi|163758110|ref|ZP_02165198.1| inner-membrane translocator [Hoeflea phototrophica DFL-43]
 gi|162284399|gb|EDQ34682.1| inner-membrane translocator [Hoeflea phototrophica DFL-43]
          Length = 306

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 109/306 (35%), Gaps = 15/306 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     +   + A GL+++ G +GL++L     + +G +    + +  G     L   
Sbjct: 10  LLNGLQLGVTLFLMAAGLTLIFGVMGLINLAHGSLFMVGGFVCAAVAAATGSFWIGLAAS 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +    ++  +   +              +    +L  +  +     G+      + 
Sbjct: 70  LVAAAALGAIVEIVVIRRLYDR----------DHLDQVLATFALVLMFSEGVRFLFGSFP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L     +++         + Y  +   +++    ++  + L + RT +    R    +++
Sbjct: 120 LYLDPPAILAGPVTLPGGLPYPAYRLAIIVAGVLIAIGLGLLISRTRLGMQIRAGEADRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I F     FA+ +A  G AGA   A +             I+   ++++GG+
Sbjct: 180 MIAALGVDIRFLYTVVFALGAALAGFAGAMIGALQSV--QVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMR 335
            S+     A+ I+  V  +   +     + +++   +  +       L+ + + +V++ +
Sbjct: 238 GSIRGALVASLIVGLVDTMGRFLLPTLLSGVMEASAARGIGSAIASMLIYLLMAVVLVFK 297

Query: 336 SHSLLR 341
              L  
Sbjct: 298 PKGLFP 303


>gi|78060709|ref|YP_367284.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia sp. 383]
 gi|77965259|gb|ABB06640.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia sp. 383]
          Length = 291

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 86/303 (28%), Gaps = 21/303 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y++FA GL+++ G L +++      + + A    +    +      +   
Sbjct: 8   IFTALQIGAVYILFALGLTLIFGVLRIVNFAHGQFFTLSALVVSVTVPWFASGGRPVWLA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+      ++                   M+  F         +  G        +L+ 
Sbjct: 68  YAIACALGVIVTSAFGALVYEAGFKRVERDMTGSFILSAGLVLMVEGG------FMKLFG 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G      +         V        +      L+  + L L  T    A R +  + +
Sbjct: 122 GGVRPVPPLIDGNVDVLGVSIAAQRLVLCGVAAALTLLVTLALGGTRFGKALRAVSIDHE 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A               F  ++A   +AGA  A             +  +     V++GGM
Sbjct: 182 AAMLQGIPYRRIAFRGFVAATAIGAVAGALIAPVAAV--TPTLGDAYLVKGFIAVVIGGM 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++     +  +  V             S               + + +  V+L+R   
Sbjct: 240 GSVAGAILGSLFIAVVESFVGFYFDPSVAS-------------LAIFVLVMAVLLVRPKG 286

Query: 339 LLR 341
           LL 
Sbjct: 287 LLG 289


>gi|320449982|ref|YP_004202078.1| branched amino acid transport system permease [Thermus scotoductus
           SA-01]
 gi|320150151|gb|ADW21529.1| branched amino acid transport system permease [Thermus scotoductus
           SA-01]
          Length = 301

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 59/306 (19%), Positives = 111/306 (36%), Gaps = 38/306 (12%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            ++   G+ +L+Y   A    +V    G LSL     + +GAY   +L    G      +
Sbjct: 26  AFLLDAGLFVLLYTALALSWDLVA-RTGQLSLAHGAFFGLGAYGAGLLVPHLGTLP--GL 82

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            + ++++G   +++G  +L+  G Y AIA+L  SE+ + + +K    T G  G+ V    
Sbjct: 83  VLGSLLAGLGALVLGSVTLRLHGLYFAIASLAFSEVLRTLALKLP-FTGGPIGLPVPPPF 141

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                      YY+ L +  L+ ++ LW   +    A    R +
Sbjct: 142 -------------------GGASPWAAYYLALAVFLLALALSLWAEWSPFRLAQAACRQS 182

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS-PDMFKFSENIIVISIVIL 275
           +     L   ++  KL +  + S   G+AG  +      +S  D F  +  +  + I I 
Sbjct: 183 EAVARVLGVRVVRVKLWSLFLGSVVAGLAGGVYGMKTLFLSPYDAFSLARAVEALVIPIF 242

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ +          L+ + +                       +  +    L LVIL  
Sbjct: 243 GGLYTTLGPLLGGVALVSLEQALR--------------LWIKEGYLVVYGAILILVILFL 288

Query: 336 SHSLLR 341
              L+ 
Sbjct: 289 PRGLVG 294


>gi|170742763|ref|YP_001771418.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168197037|gb|ACA18984.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 291

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 99/305 (32%), Gaps = 28/305 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY++ A GLS++    G+++L     +A+GAY    +     L     I  
Sbjct: 10  VVNGLFLGAIYLLIALGLSLIFSLGGIVNLAHGAFFAVGAYLT--IVLSPSLGFSGAILA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  G+       +       I +L+++     +  +   +  G   +        
Sbjct: 68  APLLVGIIGLAAERLLFRRFYRSDPILSLLLTFGLAMVAEQALRMIFGAPPLPYGIPQAL 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                 I   +   +L  +    A++   L+RT      R    N  
Sbjct: 128 RGQVF----------LGDFILSRYRLTILAAVVAAVAAVWFLLQRTTFGRVVRAGVQNPD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L  ++     +   +S A  G+AG   A                     +V++GG+
Sbjct: 178 MVAALGISLKPYMAAVVFISVALAGLAGVMLAPITGV--HPAMGAEVLTGAFVVVVIGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S   +  A  I+  V  L   +   +  +               +   + L++L+R   
Sbjct: 236 GSFWGVVVAALIVGVVRGLMVLVYPGFAEAA--------------IYALMALILLVRPRG 281

Query: 339 LLRLR 343
           L   R
Sbjct: 282 LFGER 286


>gi|71084046|ref|YP_266766.1| high-affinity branched-chain amino acid transport permease protein
           [Candidatus Pelagibacter ubique HTCC1062]
 gi|71063159|gb|AAZ22162.1| probable high-affinity branched-chain amino acid transport permease
           protein [Candidatus Pelagibacter ubique HTCC1062]
          Length = 342

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 47/331 (14%), Positives = 101/331 (30%), Gaps = 26/331 (7%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L++F   GA     Y   M     I ++ A    +  G +G  +   ++ + +G Y  
Sbjct: 1   MGLIIFGLAGAFIFPAYKLQMSFLY-ILIVLAMTWDVQGGQMGYNTFGNILFFGVGMYVA 59

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
                    S+          +    +               I   I++ +    ++  +
Sbjct: 60  SSTQIAMFFSLAEWTDAGGEKTFVHTVPQFFQGFGVGILLAGIIPTIIAGVIGYGILGLR 119

Query: 142 PIT--------NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
                         AG               ++  + +   S      FMYY+  G+  +
Sbjct: 120 GHYFAICTLALGIAAGEIAGGIEIIGAGQGMTVPVWPKDLGSNASSSQFMYYLSFGLAVI 179

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +   + W   T        IRDN+    ++    +  K+  + VS+ F+G+AG       
Sbjct: 180 TFITLKWAYSTRFGLILNAIRDNEDKAEAMGIHTMRYKIIGWMVSAFFVGIAGGLMGHIN 239

Query: 254 DRISPDMF---KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             I P+       +  + ++ + ILGG  +L        +     E              
Sbjct: 240 GYIEPNEIAFAGPTFGVFMVLMAILGGKGTLWGPLVGAVLFHLFKE-------------- 285

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            F   F       + + + ++++     L+ 
Sbjct: 286 GFWTYFLGWQYVALGVLIIVIVVYFPEGLMG 316


>gi|302870044|ref|YP_003838681.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029]
 gi|315503683|ref|YP_004082570.1| inner-membrane translocator [Micromonospora sp. L5]
 gi|302572903|gb|ADL49105.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029]
 gi|315410302|gb|ADU08419.1| inner-membrane translocator [Micromonospora sp. L5]
          Length = 296

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/279 (14%), Positives = 86/279 (30%), Gaps = 6/279 (2%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           Y + A GLS+V G   +L+    +   +GAY+          +          +      
Sbjct: 18  YFLVASGLSLVFGLADVLNFAHGLFLGVGAYATWWAAGNLPGAGPDGFGFVLAVVFGVLA 77

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
              +  L        + +  + ++   + +    +   +A      R +      R +  
Sbjct: 78  GSLVAVLVELVLIRPLYSRTIEQVLVTVGLSLAGVALLQATWGADPRPFPRPDWSRGVTS 137

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                            +++    +  +++ +LR T      R   +N++   +L   + 
Sbjct: 138 VLG-----AQVPNAGLLLIVAAAVVLGALLAFLRWTRYGLIIRAGVENREMVTALGIDVR 192

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
            A    FA+  A   +AGA        +SP        I    +V++GGM S+   A A 
Sbjct: 193 KAFTLVFAIGGAAAALAGALGGVYFGTVSPGQGGSLL-IFAFIVVVIGGMGSVVGSAYAA 251

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +  + +            L        +       +A
Sbjct: 252 VAVGLLQQFVNYYGTSGLGDLCVVGLLAVVLLLRPQGLA 290


>gi|225571609|ref|ZP_03780605.1| hypothetical protein CLOHYLEM_07707 [Clostridium hylemonae DSM
           15053]
 gi|225159686|gb|EEG72305.1| hypothetical protein CLOHYLEM_07707 [Clostridium hylemonae DSM
           15053]
          Length = 332

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/326 (12%), Positives = 101/326 (30%), Gaps = 23/326 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++       L +  VV  L+             + ++     I  + A G ++++ + G 
Sbjct: 13  IKEQLSRVFLLIALVVIALIFQAVQPRFLMLNNVMNLLALSSIIGVLALG-NMILMAAGE 71

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           +S +      +    +    +    +   L  + ++ + A   +         G    + 
Sbjct: 72  MSFSIGAQCTVIGAVFGKFLAAPDSNNMFLAFLISVAASAAIGLFLAFCTIRIGVPTFVC 131

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL ++ +                      +L   GTT+ S      F    +     +  
Sbjct: 132 TLALATVVDG-----------------CSQLLNDGTTLYSKDWPDSFNIMQMRIGGILPA 174

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            +     L+    L   +T        +  N  A  +   ++   K+ AF +SS F G+A
Sbjct: 175 AVAVFLGLAVLTHLVYEKTRFGRHLYAVGSNPTAANNSGISVPGMKVWAFVISSVFCGLA 234

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILG-----GMTSLSKIAKATAILIGVVELCCG 300
           G   A+  + +S  M        + + ++       G  ++     A  ++I +      
Sbjct: 235 GMIAASYNNSVSLTMGSELLMPAIAATMLSATFLKLGKYNVPGTVLAAILMIVIQNGVIS 294

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVI 326
             +  +   +       +    + +I
Sbjct: 295 AGYPIYVKDIVQGLLLTVAVAIIALI 320


>gi|326334050|ref|ZP_08200279.1| inner membrane ABC transporter permease protein YdeY
           [Nocardioidaceae bacterium Broad-1]
 gi|325948199|gb|EGD40310.1| inner membrane ABC transporter permease protein YdeY
           [Nocardioidaceae bacterium Broad-1]
          Length = 347

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/319 (13%), Positives = 89/319 (27%), Gaps = 24/319 (7%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +   I      +  +   +      S      + +   I V  A G ++V+     + L
Sbjct: 29  QRETGIAVAFVALLVVTTAVNPNFLFSTDGWRDLTLTPAILVCLAIGQAMVI-VTRNVDL 87

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +      + AY    L    GL + +++ ++       G++ G+     +   L I    
Sbjct: 88  SVGSTLGLTAYLAGRLFLDTGLPVIVVVLIAVAAGAVLGLVNGVLVAFAKVPALVITLGT 147

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +                           +     + +               +F+  +  
Sbjct: 148 LYV------------------YRGIMLEWAGSDRINASDIPPGLLDFGTGSFLFIPNLAW 189

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
               L A  +  +R T +   +  I  +  A            L AFA S A  G+AG  
Sbjct: 190 ISFALLAVAVYLMRSTRVGREFYAIGSDPDAATLYGLRDKRRVLQAFATSGALAGLAGIL 249

Query: 249 FAASRDRISPDMFKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           + +    IS  + +  E       +V  + I GG  ++   A    +L  +      +  
Sbjct: 250 YVSRYGTISSGVGQGIELEAVGAAVVGGVAIFGGSGTVLGAALGAYLLTTINRALPVLGI 309

Query: 304 YYFNSLLKFDCSFNMRHTT 322
             F                
Sbjct: 310 PDFWQQAVVGALIIGAIVL 328


>gi|296454650|ref|YP_003661793.1| inner-membrane translocator [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296184081|gb|ADH00963.1| inner-membrane translocator [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 335

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 44/296 (14%), Positives = 89/296 (30%), Gaps = 28/296 (9%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
              A  +   + ++GIQ     + A+G + V+   G + L+     A+ +      G+  
Sbjct: 50  ATPAFLTGPNMLNVGIQAATVAILAFGQTFVIVEAG-IDLSVGSVAAVSSMLVAYTGASM 108

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           GL   L I V  +     G + G+ +   +                              
Sbjct: 109 GLPPILTICVGLVTGAVFGALSGVANAFLKLPSFI----------------------ATL 146

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
            +    R   L  +    +      + F    + +   ++ M  +     + L  T+I  
Sbjct: 147 AMMSVARGLTLVISDGRPVSTSGMVNFFGSTVLGIPIPIVMMIIMGVIASVILNFTSIGR 206

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           +   +  N +A      ++   ++  F +S  F  +AG   A       P      E   
Sbjct: 207 SMYAVGGNMEASRLSGISVHKTQIMVFVLSGIFAAVAGLVIAGRLHSAQPQAASGYEMDA 266

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           + S+VI      GG   +S       +L  +      +N   F   +         
Sbjct: 267 IASVVIGGASLSGGKGKISGTFIGAILLAVIRNGLNILNVSSFWQQVVIGLVIAFA 322


>gi|182419976|ref|ZP_02951212.1| ribose transport system permease protein RbsC [Clostridium
           butyricum 5521]
 gi|237665995|ref|ZP_04525983.1| ribose transport system permease protein RbsC [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182376227|gb|EDT73812.1| ribose transport system permease protein RbsC [Clostridium
           butyricum 5521]
 gi|237658942|gb|EEP56494.1| ribose transport system permease protein RbsC [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 310

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 94/312 (30%), Gaps = 27/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               +   +++ +      S   + ++  QI +  + A G++ V+   G + L+     A
Sbjct: 15  IFGLIGLCIVISIISPRFLSVANLRNVFTQISVNAVIAMGMTFVI-LTGGIDLSVGSIVA 73

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I       L    G  IW+ +  + +I    G+I GL   K +         I +   Q 
Sbjct: 74  ISGALSAALIKSTGS-IWIGLLSAVLIGAVVGLINGLVISKGKLQAF-----IATLATQT 127

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I      +  G   I        +    R L        + ++  I  Y +         
Sbjct: 128 IFRGITYVFTGGNPISGLTDELIILANSRILGIPVLVIVTIIVLIICAYLL--------- 178

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +T        +  N+ +       +   K+  + +S    G+AGA   +    
Sbjct: 179 ------NQTKYGRYIYAVGGNEDSSRLSGINVDKIKILVYVISGIASGIAGAIVMSRIGS 232

Query: 256 ISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            +P      E   + +IVI      GG  S+        I+  +      M+   F   +
Sbjct: 233 AAPTAGNGYELDAIAAIVIGGTNLNGGEGSIWGTVIGILIIGVLSNGLNLMDVSAFYQTI 292

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 293 VKGLVILFAVLI 304


>gi|162148224|ref|YP_001602685.1| ribose transport system permease rbsC [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209542866|ref|YP_002275095.1| Monosaccharide-transporting ATPase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161786801|emb|CAP56384.1| putative ribose transport system permease protein rbsC
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530543|gb|ACI50480.1| Monosaccharide-transporting ATPase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 348

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/330 (13%), Positives = 99/330 (30%), Gaps = 23/330 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLF----LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           L ++  +L L+ V    ++F           +   I ++   I    + A G++ V+   
Sbjct: 25  LVRFQSLLGLVLVAAGGIIFSPRRHGHILFLAPDNIANIVRSISETGILALGMTFVI-IS 83

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+      + +     L   +G  I   +P+  +I  A G++ G+ S + R     
Sbjct: 84  GGIDLSVGALLGLSSVLTASLMVNHGWGIATTLPLVLLIGTAFGLVQGVLSNRLRIQAFI 143

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           +            L   +            + +     T               ++    
Sbjct: 144 VT-----------LAGLQAARGLALIASDNNFININYGTGPGDAPPAFAILGQRVFGNIF 192

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
               L    L+    L L  T        +  N++A       + + K++ + +S     
Sbjct: 193 PVATLVFVVLAVIASLLLDETRYGRYVFAVGGNERAARLSGIPLRWIKVTVYGLSGFCAA 252

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVEL 297
           +AG   A      SP+       +  I+ V++      GG  S+        +L  +  +
Sbjct: 253 VAGIVHAGQFSFGSPND-GTGYELNAIAAVVIGGTDLFGGAGSMVGTIAGAVMLGALANI 311

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
               +      LL               + 
Sbjct: 312 LQLNDVSAAMQLLATGLIIVGAAGLQTFVG 341


>gi|269127373|ref|YP_003300743.1| inner-membrane translocator [Thermomonospora curvata DSM 43183]
 gi|268312331|gb|ACY98705.1| inner-membrane translocator [Thermomonospora curvata DSM 43183]
          Length = 296

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 82/306 (26%), Gaps = 21/306 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G  I+  +  +++         G +          L  W  + V
Sbjct: 8   VVNGVSIGSVYALIALGFVIIFKATEVVNFAHASLLLAGGFITAK--LHGQLGFWPALLV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +   G ++    L+           I++     ++        G            
Sbjct: 66  GIAGAAVLGALVEFLVLRRSRAGDHHVLAIVTIGVDILMTTELTRQIGTD---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +    +        +         L+    L    +L  R T+   A R   ++++
Sbjct: 116 -VLAMGDPWQSKVVHLGGISIAQTRIAALVTAATLITCFLLAFRYTSWGIAMRAAAEDRE 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +      A+AV+ A   +A  F          D       +      ILGG+
Sbjct: 175 TAALMGIRLGRVSTGAWAVAGALAAVAALFLTV-FPTPGLDRTTSLAALKAFPAAILGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +       I+     L  G                         + + +++L+R   
Sbjct: 234 DSTTGALVGGLIIGLTESLATGYQSELSFLGRGIGEVAP-------FLVMVIILLIRPAG 286

Query: 339 LLRLRT 344
           L   R 
Sbjct: 287 LFGTRE 292


>gi|170290416|ref|YP_001737232.1| ABC-type branched-chain amino acid transport system, permease
           component [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174496|gb|ACB07549.1| ABC-type branched-chain amino acid transport system, permease
           component [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 352

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 114/326 (34%), Gaps = 23/326 (7%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--------------- 82
           ++ S      +Y++ +  L+I  G  G+     V   A  AY                  
Sbjct: 11  FVTSFIAVYSVYLIASVSLNIQRGYAGIPQFGLVFPIAGAAYIMGNLSINLAVRILGIKT 70

Query: 83  ----ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               I  S   +++   I  S  +      I+ L      G  L +  +  +   +   +
Sbjct: 71  ELDPIYESSGVIALINPILSSNPLLSIAFFILCLIIGAIVGAILGLIQVGPAIRLRIDYL 130

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +  G+    +A     L      +     F  +     + M   +L +  +  +  
Sbjct: 131 GLTLLAFGEIANVIARAYRPLIGGEYGVQVPSVFGWAGKNTIVAMTAAMLIIALIIYAYA 190

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
            +L RT +    + IRDN+ A  +L  +++  +  A  + SAF G+AG  +A     + P
Sbjct: 191 EYLGRTPMGRTMKAIRDNEVAAAALGKSLVKYRAIAIVIGSAFCGIAGVLWAFFNGSVMP 250

Query: 259 DMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             F +F+   +   +++LGG+ +       T + + +      + +Y    +        
Sbjct: 251 GQFVRFNWTFLPWLMILLGGIGNNRGALVGTTVFVALD---RFITYYKHEFVGLLPFDVI 307

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLR 343
             +  L+      +++ R   +L  R
Sbjct: 308 WLYQILLGAITAFILIYRPQGVLPER 333


>gi|113460912|ref|YP_718979.1| ribose transport system permease [Haemophilus somnus 129PT]
 gi|170717463|ref|YP_001784560.1| monosaccharide-transporting ATPase [Haemophilus somnus 2336]
 gi|112822955|gb|ABI25044.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Haemophilus somnus 129PT]
 gi|168825592|gb|ACA30963.1| Monosaccharide-transporting ATPase [Haemophilus somnus 2336]
          Length = 342

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 97/313 (30%), Gaps = 8/313 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  +V  + +     A  S   I ++ +Q+ +  + A G++ V+   G + L+     
Sbjct: 13  IGIALIVMIIGMSFASDAFLSAHNILNILLQVSVICIIAVGMTYVI-LTGGIDLSVGSIV 71

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +        +   +   A+++     I+G   +     Y+    ++  ++  
Sbjct: 72  ALSAVCLGLFTHLGLKWLGDEVSDFAVLAVVLIAILGSVLVGALCGYINGIIIVYGKVTS 131

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I      +     G+ +              +RFF      +     +   ++    + 
Sbjct: 132 FIAT--LGMMGIARGLALTISDGKTIYNFPDALRFFGNGRIPISDSFSIPIPVIIAILVV 189

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L +T        +  N++A       +   ++  + ++ A   +         +
Sbjct: 190 LVSFYVLTQTIFGRQIYALGGNREAVRLSGVNVEKLEVKTYVINGALAAVGAVILVGRLN 249

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + + VI     +GG  S+   +    I+  +      ++   +   
Sbjct: 250 AAQPIAGTGYELDAIAATVIGGTSLMGGFGSVIGTSIGALIMGVLQNGLTLLDVTSYLQR 309

Query: 310 LKFDCSFNMRHTT 322
           L       +    
Sbjct: 310 LIIGVVIILAVFF 322


>gi|15669456|ref|NP_248266.1| high-affinity branched-chain amino acid transport protein BraE
           [Methanocaldococcus jannaschii DSM 2661]
 gi|18202576|sp|Q58666|LIVM_METJA RecName: Full=Probable branched-chain amino acid transport permease
           protein livM
 gi|1591905|gb|AAB99276.1| high-affinity branched-chain amino acid transport protein (braE)
           [Methanocaldococcus jannaschii DSM 2661]
          Length = 345

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 99/324 (30%), Gaps = 20/324 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLN-----CVIAYAIGAYSYVILGSRYGLSIW 93
           I  + +   +Y + +  L++  G  G+ +        V A A+G     +L   +G+   
Sbjct: 6   ISMILLWFGLYYIVSLSLNMEFGYAGIPNFGKALSVLVGAIAVGGILDRLLMLYFGIGGD 65

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI--- 150
            +   +   S    +I   P +      LAI    +       +         +  +   
Sbjct: 66  FITGTTYATSAINNLIASNPIVGIGILILAIILASILGFVVGAIFILPSAKLKEDYLGIT 125

Query: 151 ----------YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
                          L  +G              S         +++L + FL       
Sbjct: 126 LLAISEAVLLICTYNLNIIGGYYGISTPDILAFVSGEYRGWVFAWIVLFIAFLVYLFFER 185

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  T      R +R+N+    +    I+  ++   A+ SA   +AG  ++     I  + 
Sbjct: 186 LLNTPFGRVLRAMRENENTVKAFGRDIMKLRIKTMAIGSAIGAIAGVLYSLYTVNIIANA 245

Query: 261 FK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           F           +V+LGG  +   +A      + V  L   +  Y     L         
Sbjct: 246 FTRVDWTFFPFLMVLLGGKGNNKGVALGVLCYVIVKVLL-DIYKYNIKYALGIPFEPVWL 304

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
              L  + + L++  +   L+  +
Sbjct: 305 SYMLFGVLMLLILYYKPSGLIPEK 328


>gi|254469616|ref|ZP_05083021.1| inner-membrane translocator [Pseudovibrio sp. JE062]
 gi|211961451|gb|EEA96646.1| inner-membrane translocator [Pseudovibrio sp. JE062]
          Length = 310

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 55/316 (17%), Positives = 107/316 (33%), Gaps = 22/316 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I  L+  M + GL+++   +G+L++     Y +GAY    LG   G    L +  
Sbjct: 8   LLNGLIYGLLLFMLSSGLTLIFSMMGVLNMAHASFYMLGAYFAFTLGQHTGFWFALFLAP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +               +A L+ +     ++ +   I  GK  +        
Sbjct: 68  ICVGAAGACIEKWGLRKV--HASGHVAELLFTFGLAYVIEELVKIIWGKFAVAYEIPPE- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   + F  F      Y  +  ++L     + A +   L+RT I    +    +  
Sbjct: 125 --------LNFSLFELFGSQYPAYRIFMLAVSIGMLAGLWYLLKRTRIGLIIQASLTHPH 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +    +  FA   A  G+AG         ++     FS   IV  +V++GGM
Sbjct: 177 MVSHLGHNVPRIFMLVFAAGCALAGLAGVIGGNYL--VTEPSMAFSIGPIVFVVVVVGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS---------FNMRHTTLMVIALF 329
            SL     A+ ++  +      ++  +         S                L  I L 
Sbjct: 235 GSLEGAFIASLLIGFLQTFAISIDASFAEIFSFAGLSADGDIGRITIASLAPMLPFILLV 294

Query: 330 LVILMRSHSLLRLRTP 345
           L++++R   L+  R  
Sbjct: 295 LMLMLRPRGLMGEREF 310


>gi|171185017|ref|YP_001793936.1| inner-membrane translocator [Thermoproteus neutrophilus V24Sta]
 gi|170934229|gb|ACB39490.1| inner-membrane translocator [Thermoproteus neutrophilus V24Sta]
          Length = 321

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 44/327 (13%), Positives = 113/327 (34%), Gaps = 32/327 (9%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             +   L   A  + +Y  ++        +    +++ VG  G +    V   A+GAY  
Sbjct: 7   LGIYALLAAAAFLNPEYAKTIASVAFFMAL-GQAVNVFVGLTGYVDFGYVAFLAMGAYGL 65

Query: 82  VILGSRYGL----SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            +    +      ++ + + +   ++      +G  +L+ RG Y AIAT+ ++E  ++++
Sbjct: 66  GVTIYYWPELGLSALPVGLALGVAMAALLAAAVGAIALRLRGAYFAIATIGVNEGVKHLI 125

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           I       G                   +   F    +  +  +    +++   FL+   
Sbjct: 126 IGANIWGGGA-----------GLILGTKMFSAFGRDLALTLANVGSPLLIVATGFLAVVA 174

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA--SRDR 255
              ++      A   +R ++ A  ++       KL AF  S++  G+ GA +    +   
Sbjct: 175 TYLIQAGKSGYALAAVRQDEDAAKAMGINPTRYKLLAFTTSASLSGLLGAAYYPLGNMQV 234

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
              ++F     +  ++++ LGG  +++       I   +  +                  
Sbjct: 235 FPENVFYVEYILDGLAVMFLGGAGTVTGPIVGGLIYFYLRSVVGAF-------------- 280

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
                     + +F+V++     ++  
Sbjct: 281 LPGYQALATALLVFIVVVAMPRGIVGT 307


>gi|86739097|ref|YP_479497.1| inner-membrane translocator [Frankia sp. CcI3]
 gi|86565959|gb|ABD09768.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter membrane protein 1,
           HAAT family [Frankia sp. CcI3]
          Length = 692

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 59/323 (18%), Positives = 115/323 (35%), Gaps = 22/323 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           LAV  P  +   L              + L   +      ++ G +G LSL  +    + 
Sbjct: 332 LAVGVPFGVVAILVLAGP---YRLGLERSLAGAVVCLSFVVLTGYVGQLSLAQMTLAGVA 388

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            +    L    G+   +   ++   +   G+++G+ S + RG  LA+ TL+     Q ++
Sbjct: 389 GFLLARLQGELGVPFPIAPLLATGAAAVAGLLLGVLSRRLRGIDLALITLVAGVAIQEVV 448

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                +T G AG  V     F      +   F R     +   +                
Sbjct: 449 FGNPLVTGGLAGSVVPSPKIFGLDLGLAGAGFPRPQYGLLALAVLA---------ACCYG 499

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  LR   +      +R N++A  +    +   K+ AF +S+A  G+ G      + R+S
Sbjct: 500 VARLRTADLGRRMLAVRANERAAAAAGIDVRRTKVLAFTLSAAIAGLGGCLIGYGQGRLS 559

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            D F  + ++  ++I   GG+TS+           G +     +       +L       
Sbjct: 560 FDSFGVTASLFFLAIAAAGGVTSV----------GGALLGGLLVPGGIVFIVLDQVAGLG 609

Query: 318 MRHTTLMVIALFLVILMRSHSLL 340
              + L  IA+ ++ ++R   L 
Sbjct: 610 KYQSVLCGIAVVVLAVLRPAGLA 632



 Score = 37.2 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 27/296 (9%), Positives = 81/296 (27%), Gaps = 10/296 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-------ILGSRYGLS 91
           +        +Y     GL +   + G++++          Y Y        ++    G+ 
Sbjct: 8   LLLGLGPGAVYAALGLGLVLTYRASGVVNIAHGAFAMYATYQYAELREVGDLVLPVVGMP 67

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             + +  +     A  + + + ++     YL +   +        ++    +T       
Sbjct: 68  PRIHLTDTPTFGLALSVSLAMAAILALASYLVVFRPLRRAQPLMTVVAAVGLTIALQA-V 126

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              +       +  ++         V        +   +  ++A +    R T    A R
Sbjct: 127 AVLQFGSDNRFLSPVLPQSPLSLLGVTVASDRLLLAASVIVVAAGLWAMSRWTLFGLATR 186

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            + ++++    L     +     + +++    +AG   A                +  ++
Sbjct: 187 AVAEDEQTTALLGRRPGWIAAVNWVMAAVLAALAGILVAP--ISALNPTSYSLFVVPALA 244

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +LGG++S          L     +   +             +       + V  
Sbjct: 245 AALLGGLSSFGLTVVGALGLGMTQAVLIPLQQDVSWLNQPGLRALLPMLLVIAVAG 300


>gi|149204315|ref|ZP_01881282.1| inner-membrane translocator [Roseovarius sp. TM1035]
 gi|149142200|gb|EDM30247.1| inner-membrane translocator [Roseovarius sp. TM1035]
          Length = 289

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 88/308 (28%), Gaps = 26/308 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             + +      +Y + A G  I       ++ +   +   GA          G   W+ I
Sbjct: 4   STLITGLALGSMYGLMALGFHITYAVSKTVNFSQGSSMMFGAVMGYTFMVTLGWPFWIGI 63

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P +       G+ +    ++      + A L+ +     +L      T GK    +    
Sbjct: 64  PAALACCAILGLAVERFLVRPFAARGSDAWLMATVAGGIVLDNIILFTFGKEPRSLPSPF 123

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                        + +    ++ ++ +   +T +  A       
Sbjct: 124 VE-----------NAIDIFGAGAYPLQLIIPVVGLAIAMALTIVTTKTRLGKAMLASVQR 172

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A             ++FA+S+ F G+AG   A   +            I   +  ILG
Sbjct: 173 PEAARLTGVNTQAVIAASFAISAVFAGVAGLLIAPLFNV--SAGMGVVFGIKAFAAAILG 230

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G++S   +  A  +   V  L        +  ++ F               + LV++   
Sbjct: 231 GISSAWGVMIAGVLYGCVEALTTAYIGSSYTQIVSFS-------------VVILVLVTVP 277

Query: 337 HSLLRLRT 344
           + L     
Sbjct: 278 NGLFGRAE 285


>gi|111019120|ref|YP_702092.1| ABC branched amino acid transporter, permease component
           [Rhodococcus jostii RHA1]
 gi|110818650|gb|ABG93934.1| ABC branched amino acid transporter, permease component
           [Rhodococcus jostii RHA1]
          Length = 294

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 94/292 (32%), Gaps = 29/292 (9%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
             G +G++++        G+Y+  +   + S    S+++ + V  ++ GA G+++ +  +
Sbjct: 28  TFGQMGVINMAHGEFIMAGSYTAYVVQQVVSSATGSLFISLLVGFVVGGAMGVLLEVTLV 87

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
           K          L+   +   +    + +    A    A                      
Sbjct: 88  KRMYHRPLDTLLVTFGVGLILQQLARDVFGAPAVNVAAP-----------EWLSGGVEIL 136

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
             +      ++L+       ++ L ++++ +    R +  N+    +   +     ++ F
Sbjct: 137 GAVVPKTRLFILVLAVVAVVALSLAMQKSPMGRRIRAVVQNRDLAETSGISSRRTDVTTF 196

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            + S   G+AG   A +    +      S  I    +V++GG+  +     A   L  + 
Sbjct: 197 FIGSGLAGVAGV--ALTLIGSTSPTIGQSYLIDAFLVVVVGGLGQMKGAVIAAFALGILN 254

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                        ++ F                   + +R   L  ++T S 
Sbjct: 255 SFVEYSTTASIAKVIVFVVIVVF-------------LQVRPQGLFAVKTRSL 293


>gi|148255477|ref|YP_001240062.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. BTAi1]
 gi|146407650|gb|ABQ36156.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 291

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 90/305 (29%), Gaps = 20/305 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G +++ G  G+L+L+        A +     S +G+  +    +
Sbjct: 7   LIDGFAISALYALGATGFTLIFGVSGVLNLSHGAIMVGAAVAAWAAASEFGVGPYTGALI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +            +++         +  ++E  + I I    +  G         L+ 
Sbjct: 67  GILAGFILAFATYFIAVRP-----IQRSKAIAESEKEIFILTATLLWGIITQEAIAYLFT 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I         V      Y+  +        +   + RT    +      N +
Sbjct: 122 NNAKTVLPIVEGVTTVFGVRTPRNEYFTAVICWVAIGLLWFLVNRTRRGKSVMAASMNPR 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +    L+ +A+     G+AG          S  +   +      SIV+LGG+
Sbjct: 182 GVTLLGIELSSIYLTVWAIYGLLAGVAGILLGMFLGVSSYSVGPLT--ASAFSIVVLGGL 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+S    A  ++  +      +    + ++        +             + +R   
Sbjct: 240 GSVSGSLIAAYVVGYLETGTAYLISPAYRTIPALLLLVVV-------------MYLRPQG 286

Query: 339 LLRLR 343
           L   R
Sbjct: 287 LFGRR 291


>gi|158424625|ref|YP_001525917.1| ABC transport permease protein [Azorhizobium caulinodans ORS 571]
 gi|158331514|dbj|BAF88999.1| ABC transport permease protein [Azorhizobium caulinodans ORS 571]
          Length = 356

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 79/300 (26%), Gaps = 28/300 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  L+  + A  L++V G     +         GAY+ +   +  G  +   I   A  
Sbjct: 80  LMSGLVIGLAALALTLVFGVARFANAATGDFMTCGAYAALAGFAASGSIVVGGIAGLAAG 139

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           + A  +   L   K  G     A L+ S      +     +  G         L      
Sbjct: 140 AIAGVLSYLLVFRKLEGRPSVSA-LLASIGVGFFIRAVLGLFYGHGQQVFQLPLVRPWRY 198

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               I+            +              ++ L L  T I    R + D+      
Sbjct: 199 FDLRIQPNDLKIGITALAVL------------VAVFLILHATPIGRRMRAVADDPMLARV 246

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                    L+ +A+  A    A A        +      +   I V +  +LGG+    
Sbjct: 247 SGIAPRQVMLALWALGGAV--AALAGVLLGIKTVVSPEMGWEMLIPVFAAAVLGGIGHPV 304

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A  +L  + E+      + +   L F     +                R   L   
Sbjct: 305 GAVLAGVMLGVLQEIATPYVGFTYKLALAFVILLVVLLV-------------RPKGLFGR 351


>gi|121610993|ref|YP_998800.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121555633|gb|ABM59782.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 335

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 61/325 (18%), Positives = 132/325 (40%), Gaps = 16/325 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+ Y LLL   L A     Y     ++++ + +FA   ++++G  GLLS          A
Sbjct: 8   AIGYGLLLLALLAAPFLGAYPV-FAMKLMCFALFASAFNLLLGYTGLLSFGHAAFLGGAA 66

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y        +GL+  L + + +      G++ G  +++ +G Y ++ TL ++++     +
Sbjct: 67  YLAGHAIKVWGLTPELGLLLGSAGGALLGLLFGWLAIRRQGIYFSMITLALAQMLFFACV 126

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +    T G+ G+    R                F    +  ++ MYY++L +  L+  +I
Sbjct: 127 QAP-FTGGEDGLQGVPR-------------GKLFGLIDLHSDLAMYYLVLVIVVLAFLLI 172

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           +    +      + I++N+    SL       KL AF +S+A  G+AGA         + 
Sbjct: 173 VRTIHSPFGQVLKGIKENEPRAISLGYDTHRFKLLAFVLSAALAGLAGALKTLVLGFATL 232

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL-LKFDCSFN 317
               ++ +  VI + +LGG+ +LS      A+++ +                +++  +  
Sbjct: 233 SDVHWTASGQVILMTLLGGLGTLSGPLVGAAVVVLLENKIGEFGNLLAALSHVQWFRTLG 292

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
              T +  +   + +L     ++  
Sbjct: 293 ESVTMVTGLIFVVCVLAFRRGIMGE 317


>gi|86742139|ref|YP_482539.1| ABC transporter-like protein [Frankia sp. CcI3]
 gi|86569001|gb|ABD12810.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter ATP-binding protein 2,
           HAAT family / amino acid/amide ABC transporter
           ATP-binding protein 1, HAAT family [Frankia sp. CcI3]
          Length = 1302

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 88/238 (36%), Gaps = 10/238 (4%)

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  G LSL  +    I A     L +  G  +   + V    + A G++  LP+L+ RG 
Sbjct: 353 GFTGQLSLAQLAFSGIAALIAGRLVATRGWPLEAAMLVGVAGTAAVGLLFALPALRTRGL 412

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY----FLGTTVRSLIRFFRFPSSF 176
            LA+ TL +      +L +    +           L+        TV     F       
Sbjct: 413 QLAVVTLGLGTAVDALLFQRGYHSPAPRSAGSIGSLFGDLASPEGTVVGRQTFLGIELDK 472

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
           V        V +    L A  +  LRR         +R N++A  +L  +++ AKL AFA
Sbjct: 473 VANPRGFATVSVLAFVLVALAVANLRRGRAGRRLIAVRTNERAAAALGISVVGAKLYAFA 532

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENI------IVISIVILGGMTSLSKIAKAT 288
           +S+A  G  G  +A        ++             ++I+  +LGG+  +S      
Sbjct: 533 LSAAIAGFGGVLYAFYVYGERGNIDYGGGAFAPFSSIMLIAYAVLGGVGWVSGAFAGA 590



 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/290 (10%), Positives = 83/290 (28%), Gaps = 12/290 (4%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y         +Y + A G+ ++    G+L+L      A  AY++  L + +GL + L  P
Sbjct: 7   YALLSLGTGALYALVASGVVVIARGAGVLNLAQGALLAWAAYAFHGLHAGWGLPLGLAAP 66

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           ++ + +   G++  L  ++   +  ++  L+ +     IL     +    A       L 
Sbjct: 67  LAVLSTTVIGVVFHLLVMRPLREATSLLRLMATLGLLIILQSLLTLMFAGAVRTSPTVLP 126

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
               T+              +  + +  +     F +  +      T  +   R      
Sbjct: 127 TGRITLFDEPVGVSVFVRLAVVAVLVAGLWAVFRFTTVGLAA----TVAAENLRAAATFG 182

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            +  ++      A  +   +    +       ++               +  +++ ++  
Sbjct: 183 WSADTVAAAAWGAGSALAGLGGVLLAPLQNPLSS--------ANLLLLIVPALAVALVAR 234

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             S   +      L  V                  D +  +      +  
Sbjct: 235 FRSFPMVLAGGLALGVVEVETQFQLVAEHPWWRGVDRAVPLAVIVFYLAI 284


>gi|312134136|ref|YP_004001474.1| inner-membrane translocator [Caldicellulosiruptor owensensis OL]
 gi|311774187|gb|ADQ03674.1| inner-membrane translocator [Caldicellulosiruptor owensensis OL]
          Length = 337

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/314 (12%), Positives = 97/314 (30%), Gaps = 7/314 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + +   +++        S +    + +Q     + A G+S+V+   G + L+   A 
Sbjct: 16  IYFILLALIIVIAFISPDFLSWRCFRDILLQSSTRAIIALGMSLVL-ITGGVDLSAGRAV 74

Query: 75  AIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            + A     +L +      +        +     + M +  L    + +AI+ L +    
Sbjct: 75  GLAAVVSASMLQTADYARRFFPELPQLPLIVPILIAMTITLLFGVINGVAISRLNLPPFI 134

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +               +          +R            V  E  + Y+L+    +
Sbjct: 135 ATLGSMVIIYGANSLYFNMPPNNSQPIGGLRPDFTNLGTGYIGVSGEYSIPYILIIALIV 194

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  + + L +TA+  +   +  N  A       +    +  +A +    G+AG   AA  
Sbjct: 195 AFVVWVLLNKTALGKSIYAVGGNVNAARVSGINVTKVLIFVYAFAGLLYGLAGVLEAART 254

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              + +     E   + + V+      GG+ ++  +     I   +      +    +  
Sbjct: 255 GGATNNYGNMYELDAIAACVVGGVSTTGGIGTVPGVLAGVLIFGVINYGLTFIGVDPYWQ 314

Query: 309 LLKFDCSFNMRHTT 322
           L+       +    
Sbjct: 315 LIIKGLIIGVAVAL 328


>gi|83591588|ref|YP_425340.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
 gi|83574502|gb|ABC21053.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
          Length = 338

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 43/332 (12%), Positives = 91/332 (27%), Gaps = 26/332 (7%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFL---------GATKSQKYIDSMGIQILIYVMFAWG 55
            + L KY  +   L +   +     L             +   +  +  QI +  + A G
Sbjct: 11  PISLRKYGIVFAFLGLCVLVSALCQLKVVQGAWPENTFLTVNNLMLILHQISVNGVLAVG 70

Query: 56  LSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           ++ VV S G + L+     A        + +R             +      + +G    
Sbjct: 71  MTFVVISAG-IDLSVGSVLAFSGMMAASMATRSVGVTPWSDTYPVIFPIIAALGVGALCG 129

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
              G  +A   +        +L+  +  T    G      L        +   F   P  
Sbjct: 130 GLSGWIIARFRIQAFIATLGMLLAARGFTMSVTGGNPISGLSPDFRWFGTGKLFEVIPVP 189

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                      ++ +  +     + L +T        +  N+K+  +         +  +
Sbjct: 190 -----------VVILALVFLLAWVILNKTVFGRYVYAVGGNEKSARTSGINTGAILIWVY 238

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAI 290
            V+    G+AG    A             E   + ++VI      GG+  L+       I
Sbjct: 239 VVAGFLAGVAGVILTAKTGSAQTSAGSSYELDAIAAVVIGGASLAGGVGRLTGTFFGALI 298

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           +  +      +    F  L+       +    
Sbjct: 299 IGVMNNGLDILGVQSFYQLIIKGGLIVVAVIL 330


>gi|295697596|ref|YP_003590834.1| inner-membrane translocator [Bacillus tusciae DSM 2912]
 gi|295413198|gb|ADG07690.1| inner-membrane translocator [Bacillus tusciae DSM 2912]
          Length = 300

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 95/308 (30%), Gaps = 23/308 (7%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--YVILGSRYGLSIWL 94
           + + +      IY + A G ++V  +  L++      Y +GA++  + ++        ++
Sbjct: 8   QNVINGVTIGSIYALMALGYTLVYSASRLVNFAQGEGYMLGAFATLFALVAVPEQSPAFV 67

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
               S + +    +++G  + +F    L  A   +  +    L              V +
Sbjct: 68  RAIASGVAAMVAAVLLGWATERFVFRPLRNAPPFIPVMASLGLAIAIE-------NTVLN 120

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                   V +L        + V        +L     L   +  +LR T    A R + 
Sbjct: 121 LFGAGFNNVPALWPLTGIQMADVRMSYVQLVMLSVAVLLMVLLDRFLRSTLPGKALRAVA 180

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
            +  A   +  +   A    F V++   G++G F A     ++  M  F   I   +  I
Sbjct: 181 QDPTAARLMGISTEAAVALVFVVAAGLSGVSGYFVALYYGSVNFYM-GFQAGINGFAAAI 239

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
            GG  ++        +L         +    +  ++ +     +                
Sbjct: 240 FGGFGNVKGAIVGGILLGIFEAFGSSLVPAEWKGVIAYVLLLLVILI------------- 286

Query: 335 RSHSLLRL 342
           R   +   
Sbjct: 287 RPQGIFGE 294


>gi|118592416|ref|ZP_01549808.1| ABC transporter permease protein [Stappia aggregata IAM 12614]
 gi|118435074|gb|EAV41723.1| ABC transporter permease protein [Stappia aggregata IAM 12614]
          Length = 286

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 86/305 (28%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y +F  GL++  G +  ++L       + AY   +     G++    +P 
Sbjct: 5   LLNGLFVGALYSLFGLGLAVTFGLMQQINLAHGDMIVLSAYLAWLATQALGINPLFSLPF 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A++  A G  +    L        + TL+++     +L     I        +      
Sbjct: 65  VALLMFAFGYALQRVVLNRTIGRGPMPTLLVTFGLSIVLQNMMQIGFSADTRSLQP---- 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I     P       +   +  L  C   A   L   +T+   A R   D+ +
Sbjct: 121 ------GSIGSAALPLGSFSIGVMPLFFFLFACLAFACTWLVFAKTSFGRAVRATSDDHR 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +          A A+S +   +A  F                  +     VILGG+
Sbjct: 175 TARLMGIETGHIFSLALAISLSVSAIAAIFLGMRSTFA--PAAGPERMLFAFEAVILGGL 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L     +   +   +                    +    V+L R   
Sbjct: 233 GSIWGTFFGGLALGLAQAIGLAIAPTFGPLAGH--------------LVFLAVLLFRPAG 278

Query: 339 LLRLR 343
           +   R
Sbjct: 279 MFARR 283


>gi|16331150|ref|NP_441878.1| high-affinity branched-chain amino acid transport protein BraE
           [Synechocystis sp. PCC 6803]
 gi|1653644|dbj|BAA18556.1| high-affinity branched-chain amino acid transport protein; BraE
           [Synechocystis sp. PCC 6803]
          Length = 372

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 54/156 (34%), Gaps = 3/156 (1%)

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            + + +   +      + IR++++   +L   + + KL AF    A  G+AGA FA    
Sbjct: 220 YAGLEFWVHSPWGRILKAIREDEEIPRALGKNVFWYKLQAFMGGGAIAGLAGALFAWQLT 279

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            I P  F          IV+LGG  S +     T I      L   +             
Sbjct: 280 SIYPSNFDTLLTFNAWIIVVLGGAGSNAGTVLGTIIFWAYDSLTRFLLP---QIAFLDQS 336

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                   ++ + L ++++ R   +L  +       
Sbjct: 337 QAGALRVMVIGLILMVLMVWRPQGILGKKEELTLGR 372


>gi|317123526|ref|YP_004097638.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Intrasporangium calvum DSM 43043]
 gi|315587614|gb|ADU46911.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Intrasporangium calvum DSM 43043]
          Length = 290

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 98/288 (34%), Gaps = 27/288 (9%)

Query: 55  GLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
           G  ++  +  +++        +GAY +        L +        +++   G+++    
Sbjct: 24  GFVLIYKATRVINFAQGEFLLVGAYMFYTGFVVMRLPLIFAAVFGVLVAIVLGVVVERFI 83

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
           L+      AI+ ++++    ++L     I  G +       L                  
Sbjct: 84  LRPLIGEHAISVIMVTIGLSSVLKALVQIFYGTSVREQPPILPTG-----------SIQV 132

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
           +     +    V+     +  +   + +R+    A R + D+Q+A  ++  ++      A
Sbjct: 133 AGATVPVNRLIVIGIAVIVLFAFSAFFQRSRHGVAMRAVADDQQAALTMGISVKRIFSLA 192

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           + +++    +AG   A        +    +  ++V  +VILGG+ S+        ++  +
Sbjct: 193 WVLAAVSALIAGVLLADLSAV---EQGIAAFGLMVFPVVILGGLDSVPGTVVGGLVIGML 249

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +   G        ++               I L  ++++R + +   
Sbjct: 250 KQYVSGYADPGLAEVIP-------------YIVLVAILVVRPYGIFGE 284


>gi|315185368|gb|EFU19141.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Spirochaeta thermophila DSM 6578]
          Length = 327

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 43/309 (13%), Positives = 90/309 (29%), Gaps = 25/309 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +V  +          + + + ++ +Q  +  + A G+++V+   G + L+     A   
Sbjct: 30  LIVMIVFFSFASPYFFNFENLITIALQTAVIGILAIGVTLVI-ITGGIDLSLGAVLAFSG 88

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
            S  +  +     +WL I +   +    G I G+  +  R                   +
Sbjct: 89  VSLALCTNAGWP-LWLSIVIGTGVGALLGGIAGILVVYGRIAPFIAT------------L 135

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
             + ++ G A +       +                  +   +    VL  +        
Sbjct: 136 STQLVSRGLALVMTGGIPLYFMNQPGFKELSQGKLFGAIPLPVIYLVVLAFLSS------ 189

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           L LR+  I      +  N++A       +   KL  +       G+AG   AA  D   P
Sbjct: 190 LLLRKVTIGRYIYAVGSNEEAARLSGINVNRTKLFVYTFCGLMSGIAGVVLAARLDSAQP 249

Query: 259 DMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
            +    E   + + VI      GG  ++        I+  +      M    F   +   
Sbjct: 250 AIGVGYELDAIAAAVIGGTSLSGGEGTIMGTMIGAFIMGVLKNGLNLMQVSQFWQQVIMG 309

Query: 314 CSFNMRHTT 322
                    
Sbjct: 310 VVVAGAVYI 318


>gi|218886676|ref|YP_002435997.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218757630|gb|ACL08529.1| inner-membrane translocator [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 308

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 93/292 (31%), Gaps = 2/292 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y +   G+++++G + +++L       +  Y    L + +G+  ++ + +
Sbjct: 12  LVAGILLGGLYALIGIGMTLILGVMKIINLTHGQLMMVAMYIAFWLFTLFGIDPYVSLLI 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +  A GM++    +       +I       +   I +  + +               
Sbjct: 72  APPLMFAFGMLIQKALVNPVLRVESILPHNQVILTVGIGLVLQNVATILFTSDYRSTPVD 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +T   L   +      +   +      L    ++  +  +L  T    + R    ++ 
Sbjct: 132 YASTAFYLSDLWAGTPVEISLSLPWAVSFLLSVVITVLLWFFLAHTDTGKSIRATAQDKD 191

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +   ++  F + SA +  AG  F                 +I   I ILGG+
Sbjct: 192 AALIMGVNVGLMRVITFGLGSALVACAGCLFIPIYYL--FPALGSQFTLIAFVITILGGL 249

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            S         IL     +        +  + +F             +A  L
Sbjct: 250 GSTLGAILGGLILGVFESMTATYVGMGWAPVGRFVIFVAALVFLPGGVASLL 301


>gi|83942455|ref|ZP_00954916.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
 gi|83846548|gb|EAP84424.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
          Length = 434

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 95/274 (34%), Gaps = 21/274 (7%)

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + +  PV  + +     ++G  +L  R DYLAIATL ++EI   +L     ++ G   +
Sbjct: 161 PVIIAWPVGGLFAAGAAWLIGKTALGLRSDYLAIATLGIAEIIIAVLKNEDWLSRGVKNV 220

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEI---------FMYYVLLGMCFLSASIILWL 201
               R       +++   F    + F +  +             +   +  +   +    
Sbjct: 221 IGIPRPVPYEIDLQNNAGFVEQAAGFGLNPVEASTLWVKFLYVCLFAVVLLVLMWLSQRA 280

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +      R IRDN+ A  ++   +    L  F + SA  G+AGA       +++P  +
Sbjct: 281 LNSPWGRMLRAIRDNEVAAEAMGKDVTARHLQVFILGSAICGIAGAMMTTLDSQLTPGSY 340

Query: 262 KFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK--------- 311
           +      ++  +VI+GG  +         ++  +  +   M  +    +           
Sbjct: 341 QPLRFTFLIWVMVIVGGSGNNLGAVLGGFLMWYLWVMVEPMGLWLMQLVTAGMSDGYWLK 400

Query: 312 --FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                S        M   L LV+      L+  +
Sbjct: 401 DHLIESAAHMRLMTMGAVLLLVLRFSPRGLIPEK 434



 Score = 37.9 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 37/104 (35%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
                  LL +  G  +S      +    LI  + A G+++  G  GL ++  +   A+G
Sbjct: 9   ALFAIVALLIVLTGLAQSWNAALLIIAMGLISSIMALGVNLQWGFAGLFNVGIMGFVALG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             + V++G       W       + +   G    + +++     
Sbjct: 69  GLAAVLIGMPPTQGAWSAGGWGILTALLMGAATIILAVQVMKRM 112


>gi|51597417|ref|YP_071608.1| sugar ABC transporter permease [Yersinia pseudotuberculosis IP
           32953]
 gi|167418733|ref|ZP_02310486.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|270487452|ref|ZP_06204526.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
 gi|51590699|emb|CAH22342.1| ABC Sugar transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|166962727|gb|EDR58748.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|270335956|gb|EFA46733.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
          Length = 342

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/323 (13%), Positives = 91/323 (28%), Gaps = 24/323 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLG 64
               + L AV+     F     T S+ Y  S      +  Q+ I  + A G++ V+ + G
Sbjct: 27  ILAFVGLCAVIALAGEFAVNSGTWSENYFLSRDNTLIILRQVSINGILAIGMTFVIITAG 86

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+      +         +              ++     + +GL      G  L  
Sbjct: 87  -VDLSVGAVLGLAGIVAARFATNNSAIALGGTDWPLLVPIVIAIGIGLVCGAINGFILGK 145

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
             L    +   +L   + +T    G     +L      +               Y + + 
Sbjct: 146 YRLQPFIVTMGMLSVARGLTLLTTGGNPVSQLTDEFRWL------------GNGYILGIP 193

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +L    L A     L +         +  N+K+  +    ++  K++ + +      +
Sbjct: 194 VPVLIFIILFAIAWFVLNKMTFGRYVYAVGGNEKSARTSGINVLRIKVAVYTLCGILAAI 253

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
           AG    A             E   + ++VI      GG+ +L        I+  +     
Sbjct: 254 AGLILTARTGSAQTGAGVSYELDAIAAVVIGGTSMAGGIGTLRGTLFGVLIIGVMNNGLD 313

Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322
            +    +   +            
Sbjct: 314 LLGVQSYYQQIIKGVLIVFAVML 336


>gi|124266962|ref|YP_001020966.1| putative amino acid transport system permease lipoprotein
           transmembrane [Methylibium petroleiphilum PM1]
 gi|124259737|gb|ABM94731.1| putative amino acid transport system permease lipoprotein
           transmembrane [Methylibium petroleiphilum PM1]
          Length = 430

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 44/338 (13%), Positives = 112/338 (33%), Gaps = 32/338 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +   L      LL              ++  Q+ I ++     ++++G  G+LS  
Sbjct: 8   RPRNVARGLVWGLFALLLAVAPLLFGSGLSLTLLSQMGIAIIACLSYNMLLGQGGMLSFG 67

Query: 70  CVIAYAIGAYSYVILGS-----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
             +   +GAY  +   +     +  L + L+  V A+      +++G  + +  G   A+
Sbjct: 68  HAVYSGLGAYLAIHALNRAADGQLPLPVSLVPLVGALAGIGVALLLGFVTTRKSGTPFAM 127

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL ++E+   + +       G+AG+                +            +I +Y
Sbjct: 128 ITLGLAELVFAMSLMVPEFFGGEAGVA------------ADRVIGAPVAGISFGPQIQVY 175

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            ++    F + + +    RT +      +RDN +    +       +   F ++  F G+
Sbjct: 176 ALIALYTFFATAAMFAFTRTPLGRMLNAVRDNPERVGYIGYDAQRVRYLTFVIAGGFAGL 235

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           +G   A + + ++ ++     +   +    LGG            +++    L       
Sbjct: 236 SGGLHALNFEIVTAEVVGLQRSGAYLLFTFLGGAGFFFGPILGAVLMVLAFVLFSEFTQA 295

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +                  + +   ++++     L  L
Sbjct: 296 W---------------LLYLGLVFLIMVMYAPGGLAGL 318


>gi|322835085|ref|YP_004215112.1| inner-membrane translocator [Rahnella sp. Y9602]
 gi|321170286|gb|ADW75985.1| inner-membrane translocator [Rahnella sp. Y9602]
          Length = 323

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/312 (9%), Positives = 89/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 24  LIALLVLIAVVSSMSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      +   +    A+ +   G+   + +                + F  
Sbjct: 83  LTGAVAASIVGLEVNAFVAVGAALALGAAVGGVTGMIVAK------------GKVQAFIA 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +      V  +  +F      +   + +   +  M  +  
Sbjct: 131 TLVMMLLLRGITMVYTNGSPISTGFNDVADVFGWFG-----IGRPLGIPTPVWLMAVVFI 185

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T +      +  N+ A      ++   K+  +++      +A     A    
Sbjct: 186 AAWYMLHHTRLGRYIYALGGNESATRLSGISVDKVKIIVYSLCGLLAALASIIEVARLSS 245

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P+     E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 246 AQPNAGTGYELDAIAAVVLGGTSLSGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 305

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 306 VKAVVILLAVLV 317


>gi|194291188|ref|YP_002007095.1| branched-chain amino acid ABC transporter permease [Cupriavidus
           taiwanensis LMG 19424]
 gi|193225023|emb|CAQ71034.1| putative Branched-chain amino acid transport system permease,
           membrane component [Cupriavidus taiwanensis LMG 19424]
          Length = 296

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 49/318 (15%), Positives = 111/318 (34%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           L+    +        +    +    Y M + GL+++ G L +++      + +GA    +
Sbjct: 2   LMDIFGIPLPAMLSQLLLGLVNGAFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLAWM 61

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
                GL+ WL++ +S ++  A G+++    L++      I  L+++     ++      
Sbjct: 62  GMEYAGLNYWLMLLLSPLVVAALGVVIEKTMLRWIYKLDHIYGLLLTLGITLVIEGIFRS 121

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G +G+         G T             F+I   +  +V++    +  +    + +
Sbjct: 122 VYGVSGLPYQTPDALQGAT----------DLGFMILPNYRAWVVVASLVVCFATWYVIEK 171

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N K   +    +       +    A    AG   A         +   
Sbjct: 172 TKLGAYLRAGTENPKMVEAFGVNVPLMVTLTYGFGVALAAFAGVLAAPVIQI--SPLMGQ 229

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  IIV ++V++GGM S+         L  +  L                  +    +T+
Sbjct: 230 NLIIIVFAVVVIGGMGSIMGSILTGLGLGVIEGLTKVF--------------YPEASSTV 275

Query: 324 MVIALFLVILMRSHSLLR 341
           +   + +V+L+R   L  
Sbjct: 276 VFFIMVIVLLLRPAGLFG 293


>gi|329923915|ref|ZP_08279255.1| galactoside transport system permease protein MglC [Paenibacillus
           sp. HGF5]
 gi|328940960|gb|EGG37265.1| galactoside transport system permease protein MglC [Paenibacillus
           sp. HGF5]
          Length = 339

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/311 (9%), Positives = 94/311 (30%), Gaps = 7/311 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ ++  + + +      +   +  +  Q    ++ A G + ++   G + L+     
Sbjct: 18  IFVVLILLVIGIAVADPNFLAFSTLRDILQQSSTRLIIALGAAFIL-ITGGVDLSAGRVV 76

Query: 75  AIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            + A     +L +    + +        +     + +    +    +   +A L +    
Sbjct: 77  GLTAVVSASMLQTEVYANRFFPDLPQVSVLLPILIGIIAGLIVGLINGFIVAKLHVPPFI 136

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +               +          +RS    +            + Y+++   F+
Sbjct: 137 ATLGTMVGIYGVNSIYFDMEPNQSQPIGGLRSDFTVWGSGYIDFGGGYSLPYIVIIAIFV 196

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +    +   +T +      I  N +A       +    ++ +A+S A  G+AG   AA  
Sbjct: 197 AFICWVIFNKTRLGKNMYAIGGNVQAAHVSGINVARNLIAIYAISGALYGIAGVLEAART 256

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              + +     E   + + V+      GG+ ++  +     I   +      +    +  
Sbjct: 257 GGATNNYGNMYELDAIAACVVGGVSTAGGIGTVPGVMAGVLIFGVINYGLTFIGVSPYWQ 316

Query: 309 LLKFDCSFNMR 319
           L+         
Sbjct: 317 LIIKGLIIVAA 327


>gi|170734811|ref|YP_001773925.1| monosaccharide-transporting ATPase [Burkholderia cenocepacia MC0-3]
 gi|169820849|gb|ACA95430.1| Monosaccharide-transporting ATPase [Burkholderia cenocepacia MC0-3]
          Length = 343

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 48/285 (16%), Positives = 94/285 (32%), Gaps = 11/285 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            VV      +   A  S   + ++G+Q+          + V+   G + L+     A+  
Sbjct: 33  LVVLVFAFSISSAAFFSVDNLMTVGLQVTSIAYLGVAATCVI-ITGGIDLSVGSVLALAG 91

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               +L              + ++ GA   ++    +   G    IATL M  + + I +
Sbjct: 92  VCAALLVKAGV--PVPAAMAAGILVGALCGLVNGICVTQMGLPPFIATLGMMLVARGIAL 149

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +                L        S I    FP +       + Y ++ M  L   + 
Sbjct: 150 QITGARPVSDLGDAFGALGDGALLRISRIGADGFPDT---TFPGIPYPVVIMVVLFVVVS 206

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L RT++      +  N +A       +   KL  + +S A  G+ G    +      P
Sbjct: 207 VLLSRTSLGRHIYAVGSNAEAARLSGVNVQGVKLFTYVLSGALAGVTGCVLMSRLVTGQP 266

Query: 259 DMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +     E   + S VI     +GG+ ++S  A    ++  +    
Sbjct: 267 NEGVMYELDAIASSVIGGTSLMGGVGTISGTAIGAFVIGVLRNGL 311


>gi|319794096|ref|YP_004155736.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315596559|gb|ADU37625.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 327

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 100/298 (33%), Gaps = 18/298 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               +I  + A GL++V G + +L+    +  A+GA+    +    G           ++
Sbjct: 39  LAMGMIIFIIASGLTLVFGLMDVLNFGHGVFIALGAFVASSVLGLMGDWTGSQELWRNLV 98

Query: 103 SGACGMIMGLPSLKFRGDYL--AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +    M++ +      G      I   +  +  + ILI    +  G+  I V      + 
Sbjct: 99  AVFPAMLVAMAVAGAVGFAFERFIVRPVYGQHLKQILITMGGMIIGEELIKVIWGPAQVP 158

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             +   +R         I +  +  V +G+      +   L RT I    R    +++  
Sbjct: 159 LPLPEALRGSLLIGDAAISKYRLLAVAVGIVVFGV-LAWTLGRTKIGLLIRAGVQDREMV 217

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            SL   I    +  F V SA  G+ G  +   +  + P M     N+++  ++I+GG+ S
Sbjct: 218 ESLGYRIGRLFVGVFVVGSALAGLGGVMWGLFQQNLVPQM-GAQVNVLIFIVIIIGGLGS 276

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                    ++  +      +                       +  +  V+L R   
Sbjct: 277 TGGALIGALLVGLMTNYIGFL--------------LPTLTQFASIFLMVAVLLWRPQG 320


>gi|206901114|ref|YP_002250177.1| ribose transport system permease protein RbsC [Dictyoglomus
           thermophilum H-6-12]
 gi|206740217|gb|ACI19275.1| ribose transport system permease protein RbsC [Dictyoglomus
           thermophilum H-6-12]
          Length = 328

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 97/320 (30%), Gaps = 17/320 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              ++     +      L      + + + ++ +   +  + A G++ V+   G + L+ 
Sbjct: 15  RQILMFASLFLLFAFFSLASPNFLTYENVIAILLATCVNGLLALGVTFVI-ITGGIDLSI 73

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                I +    +  + + L +++ +    +     G I G    K +         +M 
Sbjct: 74  GTVMTISSVMSGVFITFWKLPVFVGVLGGILTGVLAGFINGTVISKMKLPPFIATLGMMM 133

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                              +     +YF    + + I       S           +L  
Sbjct: 134 IA-----------KGLALVVSGCKPIYFNDAPIFNKIAMGSILGSIFPGLGEFPNAILWF 182

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                   + L RTA+      I  N++A       +   K   +A+   F+G+AG   A
Sbjct: 183 ILFIIIAHIILTRTALGRYTFAIGSNEEAARLSGLNVDKWKTIIYALCGMFVGIAGVIMA 242

Query: 251 ASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           +  +   P + +  E   + ++VI      GG  S+        I+  +      ++   
Sbjct: 243 SRLNSAQPALGQGYELDAIAAVVIGGTSLRGGEGSIIGTVIGALIMSTLTNGLRILSVPQ 302

Query: 306 FNSLLKFDCSFNMRHTTLMV 325
              ++             ++
Sbjct: 303 EWQIVVSGIIIIGAVYLDII 322


>gi|149377234|ref|ZP_01894982.1| possible ABC transporter, permease protein precursor [Marinobacter
           algicola DG893]
 gi|149358533|gb|EDM47007.1| possible ABC transporter, permease protein precursor [Marinobacter
           algicola DG893]
          Length = 331

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 103/334 (30%), Gaps = 34/334 (10%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +  +IL L+ +V  LL    +      K +      +          ++++G  GLLS 
Sbjct: 22  QRKKQILNLVLLVLLLLAPAVMYPVFLMKILCFALFAVAF--------NLLLGYTGLLSF 73

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                 A G+Y+   L S +      +  ++   +     +        R         +
Sbjct: 74  GHAAFLAAGSYTTGYLLSNFSGLTTEMGIIAGTAAATVLGLGFGVVAIRRQGIYFAMITL 133

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                        P T G+ G++   R                F    +     MYY +L
Sbjct: 134 ALAQLVYFFFVQAPFTGGEDGMHGVPR-------------GHLFGLVDLSNNYAMYYFVL 180

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +      ++  +  +      + I+ N+    SL   +   KL AF +S++  G+AG+ 
Sbjct: 181 AVFLGGYLVVQRIVGSPFGQVLKAIKQNEPRAVSLGYNVDRYKLLAFVISASLAGLAGSV 240

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                   S +   +  +  VI + +LGG  +L         ++ +           +  
Sbjct: 241 KTVVFQLASLNDAHWHMSGEVILMTLLGGTGTLLGPVVGATFVVNLEYQLAQGPLGDWVD 300

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         ++     L ++     ++  
Sbjct: 301 P-------------ILGGIFVLTVMAFRSGIVGE 321


>gi|73543050|ref|YP_297570.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72120463|gb|AAZ62726.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 296

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 107/316 (33%), Gaps = 26/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y M + GL+++ G L +++      + +GA    +   
Sbjct: 5   IFGIPLPAMLSQLLLGLVNGAFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLAWMGME 64

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL+ W+++ ++ +     G+++    L++      I  L+++     ++        G
Sbjct: 65  YAGLNYWVMLILAPLAVAVIGVVIEKTMLRWIYKLDHIYGLLLTLGITLVIEGIFRSIYG 124

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+         G T             F+I   +  +V++    +  +    + +T +
Sbjct: 125 VSGLPYQTPDALQGAT----------DLGFMILPNYRAWVVVASLVVCFATWYVIEKTKL 174

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +   +  
Sbjct: 175 GAYLRAGTENPKMVEAFGVNVPLMVTLTYGFGVALAAFAGVLAAPVIQI--SPLMGQNLI 232

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           IIV ++V++GGM S+         L  +  L                  +    +T++  
Sbjct: 233 IIVFAVVVIGGMGSIMGSILTGLGLGVIEGLTKVF--------------YPEASSTVVFF 278

Query: 327 ALFLVILMRSHSLLRL 342
            + +V+L+R   L   
Sbjct: 279 IMVIVLLLRPAGLFGR 294


>gi|229819847|ref|YP_002881373.1| Monosaccharide-transporting ATPase [Beutenbergia cavernae DSM
           12333]
 gi|229565760|gb|ACQ79611.1| Monosaccharide-transporting ATPase [Beutenbergia cavernae DSM
           12333]
          Length = 345

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/323 (11%), Positives = 95/323 (29%), Gaps = 29/323 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L +   ++  L ++  + +            I ++     I  + + G++ V+ + G + 
Sbjct: 33  LWRNLGLVIALVLLCVVGIITSGPDFVGGNNIVTILRYAAIIGVLSIGMTFVI-TAGGID 91

Query: 68  LNCVIAYAIG---AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           L+      +    A +             +++  + ++  ACG++ G+     +      
Sbjct: 92  LSVGSVLGLASVWATTLATQTIAANTHWIVMVTTAVLVGAACGLVNGVLIAYGKVVAFI- 150

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           ATL M    + +        N                     +    F + +    + M 
Sbjct: 151 ATLAMLVAARGLAEIISGKRN-------------------QNLENNGFEAFWRDDFLGMQ 191

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            ++     ++    + L RT        +  N +A       +       + +  A  G+
Sbjct: 192 TIVWVFAVVAVLGWVLLNRTTFGRRTIAVGGNAEAARLAGIKVRAHTTWLYVLCGALAGL 251

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
           AG    A     S       E  ++ ++V+     +GG  ++        I   +  +  
Sbjct: 252 AGVMMIARTTTGSSTHGTLYELDVIAAVVVGGTLLIGGRGTIVGTVLGVLIFATLSNVFT 311

Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322
             N       +       +    
Sbjct: 312 QNNLSISVQSVAKGAIIVLAVLL 334


>gi|222102749|ref|YP_002539788.1| ABC transporter membrane spanning protein (branched chain amino
           acid) [Agrobacterium vitis S4]
 gi|221739350|gb|ACM40083.1| ABC transporter membrane spanning protein (branched chain amino
           acid) [Agrobacterium vitis S4]
          Length = 287

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 101/304 (33%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I    +   +Y +FA GLS+V G + L++L       + ++  ++L + +G++ +L   +
Sbjct: 7   ILQGALLGGLYALFAAGLSLVFGIMRLVNLAHGDLIVLASFLILMLANTFGINPFLAALI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +    G ++    L        +  L+++     ++              ++     
Sbjct: 67  AIPLMFGLGWLLQTYLLNRTLGKDILPPLLVTFGLSIVIQNGLLEGFTADSRRLS----- 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  ++     P + +   I           +  ++   + RT++  A+R   D+  
Sbjct: 122 -----TGVLETASLPLAGLNIGIMPLLTFGSAIIVIIALNQLIYRTSLGRAFRATSDDPV 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +          A  ++   + +A  + +   +         S  I     VI+GG+
Sbjct: 177 TAGMMGVRPHRIFAMATGLAMVVVTIAALYLSTRANF--DPTAGPSRLIYAFEAVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        +L     L   +N  +                    IA  +V+L+R   
Sbjct: 235 GSLWGTLAGGVVLGIAQTLGAAINPEW--------------QILAGHIAFLIVLLVRPRG 280

Query: 339 LLRL 342
           L   
Sbjct: 281 LFPR 284


>gi|154508196|ref|ZP_02043838.1| hypothetical protein ACTODO_00690 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797830|gb|EDN80250.1| hypothetical protein ACTODO_00690 [Actinomyces odontolyticus ATCC
           17982]
          Length = 334

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 101/320 (31%), Gaps = 23/320 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+  +  +    +   LL ++      S + +  + +   I ++ A G S+++ S G + 
Sbjct: 14  LSMRELPVIAALIALVLLTWVMNPRFLSAQGVRDLFLNATIAMLMAAGQSLIIQSEG-VD 72

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+        A++   L +       +++ ++ +I GA    +    +        + TL
Sbjct: 73  LSVGSILGCTAFATGFLFAANPGLPIVVVFIAGIILGALLGALNGLLVTQAKVPAMVITL 132

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               +F+  L  W   T   AG                      F    V        + 
Sbjct: 133 GTLYVFRGGLNWWAGSTQYFAGDR-----------------PQAFGDLGVATIGGFPLLT 175

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    +   + L+ R          I  ++ A       +    + AF V+ A +G+ G 
Sbjct: 176 LLAVIVIVIVSLYQRYARSGRDLYAIGSDRTAAAVYGIPVAKRVVMAFVVNGALVGLGGV 235

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
            +A+  + +        E  IV + V+      GG+ +    A    +L  +      + 
Sbjct: 236 LYASRFNSVGATTGAGMELDIVAACVVGGVAMTGGVGTAYGAAIGALLLTTMTSALTAVG 295

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F           +    
Sbjct: 296 VDKFWQKAVVGALILIAIVV 315


>gi|146339293|ref|YP_001204341.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146192099|emb|CAL76104.1| putative ABC transporter permease protein [Bradyrhizobium sp.
           ORS278]
          Length = 287

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 91/304 (29%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I    +   +Y +FA GLS+V G + L++L       + AY  ++L S  GL  ++ + +
Sbjct: 7   ILQGVLLGGLYALFAAGLSLVFGIMRLVNLAHGDLIVLAAYLILVLVSGLGLHPFVAVLI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +    G ++    L        +  L+++     +L              +      
Sbjct: 67  AMPLMFGIGWLLQAYVLNRTLGPDILPPLLVTFGLSVVLQNGLLQAYSADSRRIP----- 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +             +           +   +   L  T +  A+R   D+  
Sbjct: 122 -----SGSLETASVALGPFNIGVMPMLTFASAVAVILILNRVLYGTELGRAFRATSDDAV 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +          A  ++ A + +A  F     +         +  I     VI+GG+
Sbjct: 177 TAGLMGIRPNRTFAVATGIAMAIVAIAAVFLGTRANF--DPTIGPARLIYAFEAVIMGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        +L     +   +N  +                    IA  LV+L+R   
Sbjct: 235 GSLWGTLAGGVVLGVAQTVGGAINPEW--------------QILAGHIAFVLVLLVRPRG 280

Query: 339 LLRL 342
               
Sbjct: 281 FFPR 284


>gi|84502140|ref|ZP_01000288.1| high-affinity branched chain amino acid ABC transporter, permease
           protein [Oceanicola batsensis HTCC2597]
 gi|84389500|gb|EAQ02219.1| high-affinity branched chain amino acid ABC transporter, permease
           protein [Oceanicola batsensis HTCC2597]
          Length = 307

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 60/312 (19%), Positives = 121/312 (38%), Gaps = 35/312 (11%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y+  +   + I ++FA+G+ + V   G L+L  V   A+GAY+  +L +  GL + L 
Sbjct: 2   SGYLAGIIAILSINIIFAYGIFLAVA-SGQLNLGGVGFQAVGAYAAGLLSASLGLPVALT 60

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +   A+++G  G+ +  P L+ RG YL +AT   +E+   I++    +            
Sbjct: 61  LLAGAVVAGLVGVALAFPILRTRGVYLVLATFAFAEVVAGIILNTDALGGA--------- 111

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                 +     + + +    L A ++ +L  T      R I D
Sbjct: 112 ------------------MGMSVPGYVEWQIPMIGAILVALLVFYLMATRFGLTLRAIHD 153

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++     +  +I   K++AF + +A  G++GAF+A +   I    F    +I V+  V+L
Sbjct: 154 DEDVSELMGVSIRNVKVAAFGLGAALAGLSGAFYAHNFGYIEAQSFNALVSIYVLLYVLL 213

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN-------MRHTTLMVIAL 328
           GG  +        A    + E+   +     +  +                   ++ +  
Sbjct: 214 GGTQTAWGPLVGAAFFTLLPEVLREVLPALKDFFITLFGGVPDGSRPDESWRFVILGVLA 273

Query: 329 FLVILMRSHSLL 340
              + +R   L+
Sbjct: 274 VGFMAIRPEGLV 285


>gi|148256173|ref|YP_001240758.1| ABC transporter [Bradyrhizobium sp. BTAi1]
 gi|146408346|gb|ABQ36852.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Bradyrhizobium sp. BTAi1]
          Length = 707

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/316 (11%), Positives = 98/316 (31%), Gaps = 21/316 (6%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
           + I  L+ +    +    +        +     ++  + +    + +V+   G + L+  
Sbjct: 31  NAIPFLVLLCVIAIFGSLIPNFFGGANLAISARELGEFGLVCMAMMVVIIVGG-IDLSVG 89

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +A+G +  + L +  G  + L IP   +I G  G++ G      R             
Sbjct: 90  SNFALGNFMTLALLNLGGWPVGLAIPAVVLICGGVGLLNGYLIGFLRLRAFLTT------ 143

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                L+    +      + +        +  +S +                  +++   
Sbjct: 144 -----LVTLIIVRAIVDMLLLKYAQAMSVSFYQSDVWDMIGLGGVAEVPSSFIILVIVAL 198

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                +     R+        I  ++++  ++  ++     +A+ +S    G+AG  +AA
Sbjct: 199 IGHVLL----TRSRPGWRMMAIGGSRRSAHNIGLSVRGMVCAAYTISGMLCGLAGVLYAA 254

Query: 252 SRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                  D     E   + + V     + GG  S++K      I++ +      +     
Sbjct: 255 RLSGAGTDTGMGLEISALTAAVLGGNSLGGGRGSVAKALIGAVIVLVMTNGVLRIGLNSG 314

Query: 307 NSLLKFDCSFNMRHTT 322
           +  +    +  +    
Sbjct: 315 SGPMVLGLTLLLAVFI 330


>gi|311106029|ref|YP_003978882.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310760718|gb|ADP16167.1| inner-membrane translocator 35 [Achromobacter xylosoxidans A8]
          Length = 291

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 84/303 (27%), Gaps = 27/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +  ++  + A  +++V G     +        +GAY+ V   +  G S+      +
Sbjct: 11  INGVVIGMLLALPALAITLVFGIARFPNAASGDYMTLGAYAAVFTQALAGGSMLAGGLAA 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
              +    +       +       ++ LI S      L        G+        L   
Sbjct: 71  VAGTTLVSLFFYAWVFRPLESRSNVSRLIASIGVAFALRSTITFFAGQDQYTFDMPLTR- 129

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                       +    V       Y++       A +   +  T      R + DN + 
Sbjct: 130 -----------AWNFGGVRILPTDLYIVGTAVAALALVFALMHMTPTGRRMRAVADNPEL 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +         ++ ++++ A+ G+ G         I      +   + + + VILGG+ 
Sbjct: 179 AAASGIRGRRVMITLWSIAGAYCGLGGVLLGIKAVVIPE--LGWELLMPMFAAVILGGIG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           +         +     E+   +                          L  V+L+R   +
Sbjct: 237 NPVGAIVGIMVFSIAQEVASLVVG-------------PAYKIVFAFAVLLCVLLLRPQGI 283

Query: 340 LRL 342
              
Sbjct: 284 FGR 286


>gi|269120104|ref|YP_003308281.1| inner-membrane translocator [Sebaldella termitidis ATCC 33386]
 gi|268613982|gb|ACZ08350.1| inner-membrane translocator [Sebaldella termitidis ATCC 33386]
          Length = 329

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 96/313 (30%), Gaps = 25/313 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++   +  +      S   + ++  Q  I  + A G+++V+   G++ L+     A
Sbjct: 31  LVSFLILFSIATIINPRFLSYTNLSTLLKQAAIIGIVALGMNLVI-IAGMIDLSVGSLVA 89

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + A   VI+ +  G     LI   +++ G     +    +        I TL     F++
Sbjct: 90  LTAGLGVIVLNSTGSIFLTLIF--SLVFGTILGGINGILITKGKIAPFIVTLATMSAFRS 147

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I+++                    G        +  F        + +  + +     + 
Sbjct: 148 IIVQLG----------------QGGPFNVGEKSYNTFRLIAAGETLGIPNLAIIFIITAV 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I + + +T        +  N+ A       +   K + F ++    G++    ++    
Sbjct: 192 IISIIMNKTKFGRYVYAVGSNENATNLTGINVNRMKNAVFCITGLLSGLSAFLLSSRLTS 251

Query: 256 ISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           I+         +  I+ V +      GG   +        +L  +  +    N   F   
Sbjct: 252 ITAPNAGMGFELDAIASVAIGGTAMNGGRGKVFGTFLGAIMLQMINNILVIANIPPFLEG 311

Query: 310 LKFDCSFNMRHTT 322
           L       +    
Sbjct: 312 LVKGIIIIVAVLF 324


>gi|91762886|ref|ZP_01264851.1| probable high-affinity branched-chain amino acid transport permease
           protein [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718688|gb|EAS85338.1| probable high-affinity branched-chain amino acid transport permease
           protein [Candidatus Pelagibacter ubique HTCC1002]
          Length = 350

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 100/334 (29%), Gaps = 26/334 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   L++    GA     Y   M     I ++ A    +  G +G  +   ++ + +G 
Sbjct: 6   FLYAGLIILGLAGAFIFPAYKLQMSFLY-ILIVLAMTWDVQGGQMGYNTFGNILFFGVGM 64

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y           S+          +    +               I   I++ +    ++
Sbjct: 65  YVASSTQIAMFFSLAEWTDAGGEKTFVHTIPQFFQGFGVGILLAGIIPTIIAGVIGYGIL 124

Query: 139 KWKPIT--------NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             +              AG               ++  + +   +      FMYY+  G+
Sbjct: 125 GLRGHYFAICTLALGIAAGEIAGGIEIIGAGQGMTVPVWPKGFGTNASSSQFMYYLSFGL 184

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++   + W   T        IRDN+    ++    +  K+  + VS+ F+G+AG    
Sbjct: 185 AVVTFITLKWAYSTRFGLVLNAIRDNEDKAEAMGIHTMRYKIIGWMVSAFFVGIAGGLMG 244

Query: 251 ASRDRISPDMF---KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
                I P        +  + ++ + ILGG  +L        +     E           
Sbjct: 245 HINGYIEPTEIAFAGPTFGVFMVLMAILGGKGTLWGPLVGAVLFHLFKE----------- 293

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
               F   F       + + + ++++     L+ 
Sbjct: 294 ---GFWTYFLGWQYVALGVLIIVIVVYFPEGLMG 324


>gi|153948856|ref|YP_001399895.1| ribose ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|152960351|gb|ABS47812.1| ribose ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 31758]
          Length = 342

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/323 (13%), Positives = 91/323 (28%), Gaps = 24/323 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLG 64
               + L AV+     F     T S+ Y  S      +  Q+ I  + A G++ V+ + G
Sbjct: 27  ILAFVGLCAVIALAGEFAVNSGTWSENYFLSRDNTLIILRQVSINGILAIGMTFVIITAG 86

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+      +         +              ++     + +GL      G  L  
Sbjct: 87  -VDLSVGAVLGLAGIVAARFATNNSAIALGGTDWPLLVPIVIAIGIGLICGAINGFILGK 145

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
             L    +   +L   + +T    G     +L      +               Y + + 
Sbjct: 146 YRLQPFIVTMGMLSVARGLTLLTTGGNPVSQLTDEFRWL------------GNGYILGIP 193

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +L    L A     L +         +  N+K+  +    ++  K++ + +      +
Sbjct: 194 VPVLIFIILFAIAWFVLNKMTFGRYVYAVGGNEKSARTSGINVLRIKVAVYTLCGILAAI 253

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
           AG    A             E   + ++VI      GG+ +L        I+  +     
Sbjct: 254 AGLILTARTGSAQTGAGVSYELDAIAAVVIGGTSMAGGIGTLRGTLFGVLIIGVMNNGLD 313

Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322
            +    +   +            
Sbjct: 314 LLGVQSYYQQIIKGVLIVFAVML 336


>gi|91789064|ref|YP_550016.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91698289|gb|ABE45118.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Polaromonas sp. JS666]
          Length = 348

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 46/326 (14%), Positives = 104/326 (31%), Gaps = 30/326 (9%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDS-----MGIQILIYVMFAWGLSIV 59
            +           L     LL       T+S +++       +  Q+++  + A G +++
Sbjct: 30  PMNSTSRHIPWGALGPWLALLATCIFFTTQSDRFLTGENLSLVLQQVMVVGILAIGQTLI 89

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           + + G + L+C +  A+G+         YG++ +L I     ++   G+I GL   + + 
Sbjct: 90  ILTAG-IDLSCGMVMALGSMIMTKFAVNYGINPYLAIVCGLAVTTGFGLINGLLVTRVKL 148

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
               +    ++  F                         + + +   +       S    
Sbjct: 149 PPFIVTLGTLNIAFAI---------------TQIYSNAQIISNLPDEMTALGNTFSLGST 193

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
           E+ +  V +   +  A  +L    TA       + +N +A       +    ++ +A++ 
Sbjct: 194 EVSLGTVTMIALYALAWFVLRE--TAPGRHLYAVGNNAEAARLTGIRVDRVLVTVYALAG 251

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIG 293
            F G+A     A    +       +EN+  I+ V+L      GG   +        I+  
Sbjct: 252 LFYGIAALLSVARTG-VGDPNAGQTENLDAITAVVLGGTSLFGGRGIILGSLVGAVIVGV 310

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMR 319
                  M        L       + 
Sbjct: 311 FRNGLTLMGVASVYQTLITGILVILA 336


>gi|13475998|ref|NP_107568.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14026758|dbj|BAB53354.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 298

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 87/271 (32%), Gaps = 9/271 (3%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
              I    +    Y + A GLS +   + +++L         A++   L SR+ +S ++ 
Sbjct: 2   SNQIIQGILLGGYYALIACGLSFMFSVMRIINLAHGSLAVFAAFALWWLASRFHVSPFVG 61

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           + +   +  A G  +    L+      A+  ++ +     ++        G     +A  
Sbjct: 62  LLIVLPLMAAIGWALQRFLLERSARGGALLPILTTFGLAIVIDNMLFEQFGADTRSLAP- 120

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                  + SL          +        +      L   + L+L RT +  + R   +
Sbjct: 121 ------YIGSLSYDSWEWPGSIYVGKLAVIMFATAVILLGGLQLFLTRTRLGRSIRATSE 174

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +      +      A   A +++   +G+AGAF                + +      ++
Sbjct: 175 DSDTAGLVGVDARRANAIAASIAMVTVGLAGAFLGMRATF--DPYAGAPQLLFAFEAAVI 232

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           GG  SL        +L     L   ++   F
Sbjct: 233 GGAGSLWGTLVGGIVLALAQTLGAQVHPQGF 263


>gi|312141164|ref|YP_004008500.1| branched-chain amino acid ABC transporter transmembrane protein
           [Rhodococcus equi 103S]
 gi|311890503|emb|CBH49821.1| putative branched-chain amino acid ABC transporter integral
           membrane subunit [Rhodococcus equi 103S]
          Length = 294

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 106/311 (34%), Gaps = 27/311 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI--WLLI 96
           + +      I ++ A GLS+  G +G++++        G+Y+  ++      +    L+ 
Sbjct: 8   LFTGLSIGSILLLAALGLSLTFGQMGVINMAHGEFIMAGSYTAYVVQQVVSSAGASLLIS 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V   + G    ++   +L  R  +  + TL+++     +L +      G   + V    
Sbjct: 68  LVVGFVVGGLMGVLLEATLIRRMYHRPLDTLLVTFGVGLVLQQLARDIFGAPAVNVVAPS 127

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           +  G                 +      ++L+      A +   L +T++    R +  N
Sbjct: 128 WLTG----------GVEILGAVVPKTRIFILVLAIVAVAVLSFALAKTSMGRRIRAVVQN 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +    +   +     ++ F + S   G+AG   A +    +      S  I    +V++G
Sbjct: 178 RDLAETSGISSRRTDVTTFFIGSGLAGVAGV--ALTLIGSTSPTIGQSYLIDAFLVVVIG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+  LS    A   L  +                    +       ++ + + + + +R 
Sbjct: 236 GLGRLSGAVVAAFALGILNSFIEY-------------STTASIAKVIVFVLIVIFLQVRP 282

Query: 337 HSLLRLRTPSN 347
             L   +T S 
Sbjct: 283 QGLFVAKTRSL 293


>gi|297190910|ref|ZP_06908308.1| branched-chain amino acid ABC transporter permease [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|297150673|gb|EDY66613.2| branched-chain amino acid ABC transporter permease [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 296

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 79/306 (25%), Gaps = 21/306 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G  ++  +  +++         G Y   +      L  W  + V
Sbjct: 8   LLGGLSIGSVYALIALGFVVIFKATEVVNFAHASLLLAGGYITAV--LHDDLGFWPALAV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +   G  +    ++           I++     +L        G            
Sbjct: 66  GIAGAAVVGSAVDFLVMRRYRGSDHSVLAIVTIGVDILLTTELTRLIGTD---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +             +          +    L  + +L  R T+   A R   +N +
Sbjct: 116 -VMALGDPWGDRVVNLGEITIAQTRIAAFVAAALLITAFLLAFRYTSWGVAMRAAAENPQ 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    +SA+AV+ A   +A  F          +       +      ILGG+
Sbjct: 175 TAALMGVRLGRVSMSAWAVAGALAAVAALFLTV-FPTPGLERATSLAALKAFPAAILGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +       I+        G                         + + LV+L R   
Sbjct: 234 DSTTGALAGGLIVGVTESFATGYQSELTFLGGGIGDLAP-------YLVMLLVLLARPAG 286

Query: 339 LLRLRT 344
           L   + 
Sbjct: 287 LFGTKE 292


>gi|294638370|ref|ZP_06716623.1| ribose ABC transporter, permease protein [Edwardsiella tarda ATCC
           23685]
 gi|291088623|gb|EFE21184.1| ribose ABC transporter, permease protein [Edwardsiella tarda ATCC
           23685]
          Length = 326

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 85/312 (27%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 27  LIALLVLIAVVSSMSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +   G    + +                     
Sbjct: 86  LTGAVAASIVGLDVNALLAVGAALALGAAIGGCTGIIVAKGKVQ--------AFIATLVM 137

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L+          G  V               +   F    +   + M   +  M  + A
Sbjct: 138 MLLLRGVTMVYTDGSPVNTGFS---------AQADLFGWFGIGRPLGMPTPIWLMIIVFA 188

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L  T +      +  N+ A       +   K+  +A+      +AG    A    
Sbjct: 189 LAWYMLHHTRLGRYIYALGGNEAATRLSGINVDRVKIVVYALCGLLSALAGVIEVARLSS 248

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 249 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIMGTLIGALILGFLNNGLNLLGVSSYYQMI 308

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 309 VKAAVILLAVLV 320


>gi|107029212|ref|YP_626307.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054]
 gi|116687083|ref|YP_840330.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
 gi|105898376|gb|ABF81334.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia cenocepacia AU 1054]
 gi|116652798|gb|ABK13437.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia cenocepacia HI2424]
          Length = 343

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 48/285 (16%), Positives = 94/285 (32%), Gaps = 11/285 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            VV      +   A  S   + ++G+Q+          + V+   G + L+     A+  
Sbjct: 33  LVVLVFAFSISSAAFFSVDNLMTVGLQVTSIAYLGVAATCVI-ITGGIDLSVGSVLALAG 91

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               +L              + ++ GA   ++    +   G    IATL M  + + I +
Sbjct: 92  VCAALLVKAGV--PVPAAMAAGILVGALCGLVNGICVTQMGLPPFIATLGMMLVARGIAL 149

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +                L        S I    FP +       + Y ++ M  L   + 
Sbjct: 150 QITGARPVSDLGDAFGALGNGALLRISRIGADGFPDT---TFPGIPYPVVIMVVLFVVVS 206

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L RT++      +  N +A       +   KL  + +S A  G+ G    +      P
Sbjct: 207 VLLSRTSLGRHIYAVGSNAEAARLSGVNVQGVKLFTYVLSGALAGVTGCVLMSRLVTGQP 266

Query: 259 DMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +     E   + S VI     +GG+ ++S  A    ++  +    
Sbjct: 267 NEGVMYELDAIASSVIGGTSLMGGVGTISGTAIGAFVIGVLRNGL 311


>gi|238783004|ref|ZP_04627031.1| Ribose transport system permease protein rbsC [Yersinia bercovieri
           ATCC 43970]
 gi|238716005|gb|EEQ07990.1| Ribose transport system permease protein rbsC [Yersinia bercovieri
           ATCC 43970]
          Length = 322

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 90/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAVVSSLSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +   G+   + +                + F  
Sbjct: 82  LTGAVAASIVGLEVNAMVAVAAALALGAFIGGITGVIVAK------------GKVQAFIA 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T V     +F      +   + +   +  M  +  
Sbjct: 130 TLVMMLLLRGVTMVYTNGSPVNTGFTEVADTFGWFG-----IGRPLGIPTPIWLMAIVFI 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 185 AAWYMLHHTRLGRYIYALGGNESATRLSGISVDKVKIIVYSLCGLLAALAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|317405904|gb|EFV86186.1| branched-chain amino acid transport system [Achromobacter
           xylosoxidans C54]
          Length = 293

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 46/301 (15%), Positives = 102/301 (33%), Gaps = 21/301 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL+++ G +G+++L     Y IGAY    LG      +       
Sbjct: 11  LNAFQYGLLLFLVASGLTLIFGIMGIINLAHGSFYMIGAYMAFALGPAVDRWL-----GG 65

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             ++     ++   +L +  +    + L      Q +L+ +  I   +    +       
Sbjct: 66  GFVATLAVCVLAAAALGYLLEAAFFSYLYRRNHLQQVLMTYGLILVFEELRSILVGNDVH 125

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G  + S ++        + Y ++  ++      ++  +   + RT +    R    N++ 
Sbjct: 126 GVPLPSWLQGSIALGDVMTYPVYRLFISAVGIAVALLLYWVIARTRLGMMLRAGASNREM 185

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             SL   +       FA   A   +AG+  A                II   +V++GG+ 
Sbjct: 186 TGSLGIDVNKLYRLVFAAGVALAALAGSIAAPVSSV--YPGMGNGVLIICFVVVVIGGIG 243

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  ++  V      +              F      L+ + +  ++L +   L
Sbjct: 244 SIRGAFLAAMLVGVVETFGQVL--------------FPAAAGVLVYVLMAAILLCKPEGL 289

Query: 340 L 340
            
Sbjct: 290 F 290


>gi|254564217|ref|YP_003071312.1| ABC transporter permease [Methylobacterium extorquens DM4]
 gi|254271495|emb|CAX27510.1| putative ABC transporter, permease precursor [Methylobacterium
           extorquens DM4]
          Length = 289

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 88/306 (28%), Gaps = 26/306 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             + S      +Y + A G  I     G ++     A  +GA        + G  + L I
Sbjct: 4   STLVSGLGLGSMYGLVALGFHITFAVSGTVNFAQGSAVTLGAVLGYTFAVQLGWPMPLAI 63

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +       G+ +    ++      + A L+ +     IL      T G          
Sbjct: 64  AAALAGCAGLGLAVERLLVRPFVVRGSDAWLLATVAGGIILDNVLLFTFG---------- 113

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                ++ S +                  + +     + +I    R T +      +  N
Sbjct: 114 -KEPRSLPSALVAAPVQVLGAGVYPLQLLIPVVGVAAAVAIRAVFRGTELGRVLLAVAQN 172

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   +   +      AFA+S+   G AG   A                I   ++ ILG
Sbjct: 173 SEAARLMGIDVARTVACAFALSAVLAGAAGLLIAPLFSV--SAEMGALFGIKAFAVAILG 230

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S + +  A  +   V                      +     ++   + L + +R 
Sbjct: 231 GIGSATGVVLAGLLYGLVEAGVTATLG-------------SGATQIVVFSVIILALALRP 277

Query: 337 HSLLRL 342
           + LL  
Sbjct: 278 NGLLGR 283


>gi|254500874|ref|ZP_05113025.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222436945|gb|EEE43624.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 306

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 48/308 (15%), Positives = 110/308 (35%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++  + A GL+++ G +GL++L     Y IGA+    +    G  +  LI  
Sbjct: 10  ILNGLQFGIMLFLMAAGLTLIFGVMGLINLAHGSLYMIGAFCAAAVAGATGSFLLGLIAA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A  + A  ++  +   +          L   +    +L  +  I     G       + 
Sbjct: 70  LAGAAIAGALVELVVIRR----------LYTKDHLDQVLATFALILIFSEGTRWLFGSFP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   +   +         + Y ++   +++    ++A + L + RT +    R   ++++
Sbjct: 120 LFLDIPDALSGPVTLPGGIEYPLYRLTLIIVGLLVAAGLFLLISRTRLGIQIRAGENDRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+
Sbjct: 180 MIAALGVDIAKLYTIVFALGAALAGLAGALVGAIQSV--QVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMR 335
            S+        ++     L                 + ++  +     + I +  V+++R
Sbjct: 238 GSIKGALIGAILVGLTDTLGGIFLPELMKLFFSPATATSIGSSIASMAIYILMAAVLVLR 297

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 298 PTGLFGAR 305


>gi|170023214|ref|YP_001719719.1| monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|186896526|ref|YP_001873638.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
 gi|169749748|gb|ACA67266.1| Monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|186699552|gb|ACC90181.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
          Length = 342

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/323 (13%), Positives = 91/323 (28%), Gaps = 24/323 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLG 64
               + L AV+     F     T S+ Y  S      +  Q+ I  + A G++ V+ + G
Sbjct: 27  ILAFVGLCAVIALAGEFAVNSGTWSENYFLSRDNTLIILRQVSINGILAIGMTFVIITAG 86

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+      +         +              ++     + +GL      G  L  
Sbjct: 87  -VDLSVGAVLGLAGIVAARFATNNSAIALGGTDWPLLVPIVIAIGIGLICGAINGFILGK 145

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
             L    +   +L   + +T    G     +L      +               Y + + 
Sbjct: 146 YRLQPFIVTMGMLSVARGLTLLTTGGNPVSQLTDEFRWL------------GNGYILGIP 193

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +L    L A     L +         +  N+K+  +    ++  K++ + +      +
Sbjct: 194 VPVLIFIILFAIAWFVLNKMTFGRYVYAVGGNEKSARTSGINVLRIKVAVYTLCGILAAI 253

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
           AG    A             E   + ++VI      GG+ +L        I+  +     
Sbjct: 254 AGLILTARTGSAQTGAGVSYELDAIAAVVIGGTSMAGGIGTLRGTLFGVLIIGVMNNGLD 313

Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322
            +    +   +            
Sbjct: 314 LLGVQSYYQQIIKGVLIVFAVML 336


>gi|110679483|ref|YP_682490.1| ribose ABC transporter permease [Roseobacter denitrificans OCh 114]
 gi|109455599|gb|ABG31804.1| Ribose ABC transporter, permease protein [Roseobacter denitrificans
           OCh 114]
          Length = 353

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 87/313 (27%), Gaps = 18/313 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L     +   L      S   +  +  Q+ I  + A   S+V+ + G + L+     
Sbjct: 45  LIVLLASIAIFGVLLGTRFFSPFALTLILQQVQIVGIVAAAQSLVILTAG-IDLSVGAIA 103

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I +        RYG+ + + I          G + G      +                
Sbjct: 104 VISSVVMGQFSFRYGVPVEVAIVCGLAFGTMIGAVNGWLIAVMKLPPFI----------- 152

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    I      +Y A+                   + F +      + ++ M  L 
Sbjct: 153 -VTLGMWQIVLAANFLYSANETIRSQDIAEQAPMLQLMGAKFNVGGAVFTFGVVFMLVLV 211

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L+ TA       + D+ +A       +    +S +A++      AG        
Sbjct: 212 LVLAYVLKHTAWGRHVYAVGDDPEAAALSGVNVKKTLISVYALAGLICAFAGWALIGRIG 271

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   +      + ++VI      GG  S+        I+         +      + 
Sbjct: 272 SVSPTSGQLLNIESITAVVIGGISLFGGRGSILGTFFGALIVGVFTLGLRLLGADAQWTF 331

Query: 310 LKFDCSFNMRHTT 322
           L            
Sbjct: 332 LLIGALIIAAVAV 344


>gi|3644001|gb|AAC69487.1| putative membrane spanning protein [Pseudomonas aeruginosa]
          Length = 614

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 101/295 (34%), Gaps = 16/295 (5%)

Query: 56  LSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           +++V G +  ++L     Y +GAY   +        + L    +   S A G+I+   ++
Sbjct: 33  VTLVFGIMSFVNLAHGSLYMLGAYFAALTFKNTDS-LTLAFFAAIFGSIAVGVILERLAV 91

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                   +  ++++        +   I  G    ++    +   T              
Sbjct: 92  SRLYSRDHLDHVLVTFGMVLFFNEMVQILWGTQQYFLPVPAWLDST----------VSIF 141

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
            + Y  + + +++    ++      + +T +    R    N K   +L   I F     F
Sbjct: 142 GINYPAYRFAIIVVGLLVAVGAHAVINKTRLGMLIRAGSVNPKMVGALGVNIKFLNALLF 201

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            + +A  G+AG   +      S         I  + ++++GG+ S+S    A  I+  V 
Sbjct: 202 GLGAALAGLAGVMASPILSIQS--GMGDPVLITTLVVIVIGGIGSVSGAFYAALIVGVVD 259

Query: 296 ELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
            L            +  D +        + L+ + + +V+ +R   L R    + 
Sbjct: 260 TLGRAFLPMILREFMARDIANAAGPAIASMLIYVLMAVVLALRPQGLFRRPEITM 314



 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 1/160 (0%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  +A++  L L  F G      +  +   ++LIY +    L+I +G  GL+SL   +  
Sbjct: 325 LVPVAIILLLALVPFWGYFTDSTFYVAFYARVLIYAIAVVALNIALGFGGLVSLGHALFM 384

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            IGAYS  I       S W+ + +  + SG  G I G  SL+  G    + TL  +++  
Sbjct: 385 GIGAYSVAIPSFYGIDSGWVHLFICLLGSGLLGYITGAISLRTTGIGFIMITLAFAQMGY 444

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
            + +  K    G  G  +A+    LG     +   + +  
Sbjct: 445 FLFVSLKQ-YGGDDGTSIANTSKMLGLDFGGVYTVYVWRL 483


>gi|76801384|ref|YP_326392.1| branched-chain/neutral amino acids ABC transporter permease
           [Natronomonas pharaonis DSM 2160]
 gi|76557249|emb|CAI48824.1| ABC-type transport system permease protein I (probable substrates
           branched-chain/neutral amino acids) 3 [Natronomonas
           pharaonis DSM 2160]
          Length = 297

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 95/304 (31%), Gaps = 21/304 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +  +   +Y + A G +++ G  G+L+L       IGAY+  ++ +       ++IP 
Sbjct: 10  FVTAAMISAVYALIAIGFTMIFGVGGVLNLAHGGLIMIGAYA-YLVVTSTSTVPSIVIPP 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A +  A  +        ++G    I   ++      +++        +       R   
Sbjct: 69  VAGLVVAIVVAALASFALYKGLVEFIEDDVIITFLATVVVAVILAELMELIFSANPRSLT 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 + +         +    F+   +        ++  ++ +T    +       Q+
Sbjct: 129 PFVPGSTALPAIGVRIQHIEIAGFVLSWVAI-----GALWYYVTKTDAGRSILATSMTQR 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   I       + ++    G+AG F    +   +  +       +   IV++GG+
Sbjct: 184 GAKLTGVDIAAVSARTWLIAGGLAGLAGVFLGTLQQ--TSPLMWLDPLALAFIIVVIGGI 241

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A   +  +     G+    F  +                I +  VIL+R   
Sbjct: 242 GSIKGSLVAAYFIGFLETYTVGLLGPEFRGVFAL-------------IIVAAVILIRPEG 288

Query: 339 LLRL 342
           L   
Sbjct: 289 LYGR 292


>gi|83953674|ref|ZP_00962395.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83841619|gb|EAP80788.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
          Length = 434

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 95/274 (34%), Gaps = 21/274 (7%)

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + +  PV  + +     ++G  +L  R DYLAIATL ++EI   +L     ++ G   +
Sbjct: 161 PVIIAWPVGGLFAAGAAWLIGKTALGLRSDYLAIATLGIAEIIIAVLKNEDWLSRGVKNV 220

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEI---------FMYYVLLGMCFLSASIILWL 201
               R       +++   F    + F +  +             +   +  +   +    
Sbjct: 221 IGIPRPVPYEIDLQNNAGFVEQAAGFGLNPVEASTLWVKFLYVCLFAVVLLVLMWLSQRA 280

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +      R IRDN+ A  ++   +    L  F + SA  G+AGA       +++P  +
Sbjct: 281 LNSPWGRMLRAIRDNEVAAEAMGKDVTARHLQVFILGSAICGIAGAMMTTLDSQLTPGSY 340

Query: 262 KFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK--------- 311
           +      ++  +VI+GG  +         ++  +  +   M  +    +           
Sbjct: 341 QPLRFTFLIWVMVIVGGSGNNLGAVLGGFLMWYLWVMVEPMGLWLMQLITAGMSDGYWLK 400

Query: 312 --FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                S        M   L LV+      L+  +
Sbjct: 401 DHLIESAAHMRLMTMGAVLLLVLRFSPRGLIPEK 434



 Score = 37.9 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 37/104 (35%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
                  LL +  G  +S      +    LI  + A G+++  G  GL ++  +   A+G
Sbjct: 9   ALFAIVALLIVLTGLAQSWNAALLIIAMGLISSIMALGVNLQWGFAGLFNVGIMGFVALG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             + V++G       W       + +   G    + +++     
Sbjct: 69  GLAAVLIGMPPTQGAWSAGGWGILTALLMGAATIILAVQVMKRM 112


>gi|288919737|ref|ZP_06414063.1| ABC transporter related protein [Frankia sp. EUN1f]
 gi|288348837|gb|EFC83088.1| ABC transporter related protein [Frankia sp. EUN1f]
          Length = 955

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 103/281 (36%), Gaps = 4/281 (1%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++   +L + L     Q     +   IL Y + A  ++I+ G  G LSL  +    +G  
Sbjct: 325 LLLLGVLAIVLPLLVHQSSRQLLYTVILCYAICAASVTILTGWAGQLSLGQMAFAGLG-- 382

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +        GL I L     ++ +    + + + SL        + T  +      + + 
Sbjct: 383 ALTAAALNRGLRISLGGSTISLNALPFPLAVLIASLVTAAIAALVGTGALRVRGLLLAVS 442

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                           L+       +           +  +   YY++L +  +  +++ 
Sbjct: 443 TFAFGIAAEQYLYRRELFQDEGAHSASFPRTTAFGIDITSQRSYYYLVLVVLAVVLAVVA 502

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            LRR+ I      +RDN     +        KL AFA++    G+ G+  A +   +   
Sbjct: 503 RLRRSGIGRTTIGVRDNPATAAAYTVGTTRVKLRAFALAGGIAGLGGSLLAGAVQNVPYA 562

Query: 260 MFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
              F   +++ ++SIV++GG+ S+         +IG+  + 
Sbjct: 563 DRYFLSADSLALVSIVVIGGLGSVYGPVLGAMWVIGLPAIF 603



 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/263 (12%), Positives = 88/263 (33%), Gaps = 9/263 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  L+  + A  + +V  S  +++        IG+  + +   R+ +  W+ +P+
Sbjct: 9   LFDGAVSGLVIGLLAISIVLVHRSTRVINFAVANMGLIGSALFALFVVRWNVPYWVALPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +I  A G ++ L  ++       +  L+ +     + +             + D   +
Sbjct: 69  SLLIGAAFGALVDLTVIRRLFRAPRVILLVATIGVAQLALTVV--------TGLPDLDDY 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                         P+S +        VL+ +  ++  + L+L RT +    R    N +
Sbjct: 121 PSEYYPVPWGGAWSPTSDLRITGAQLSVLVTVPVVALLLGLFLSRTVLGRTVRASASNPE 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF-KFSENIIVISIVILGG 277
                  +      + +A++     ++    +A    +        +  +  ++  ++  
Sbjct: 181 LARLQGISPKAVSTAMWALAGLIGTLSLILISAQNKSLDQIATLGPTTLVRALAAAVIAR 240

Query: 278 MTSLSKIAKATAILIGVVELCCG 300
           M SL     A   L  +      
Sbjct: 241 MVSLWVAMLAGVALGLLQSFVQF 263


>gi|269140700|ref|YP_003297401.1| monosaccharide-transporting ATPase [Edwardsiella tarda EIB202]
 gi|267986361|gb|ACY86190.1| monosaccharide-transporting ATPase [Edwardsiella tarda EIB202]
 gi|304560483|gb|ADM43147.1| Ribose/xylose/arabinose/galactoside ABC-type transport system,
           permease component 2 [Edwardsiella tarda FL6-60]
          Length = 329

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 91/313 (29%), Gaps = 20/313 (6%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +++  L LL +   L L L      S   +  +     I  + A GL  VV   G + ++
Sbjct: 12  RHEAYLGLLVIALALGLSLATDEFFSLGNLTDVATSYAILGILACGL-FVVLIAGGIDIS 70

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                AI  Y        +G S  L   ++  +    G+  G      R   + I     
Sbjct: 71  FPAMTAIAQYVMASWIITHGGSFPLAFAMAIAVGLLLGLCNGFLVYWLRVPAIIIT---- 126

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                   I    +  G           +           +   +    Y+  +   LL 
Sbjct: 127 --------IATLNLYYGLLVYLTKGTWLYGFPDWFMEGVNYLSFTGADGYDYGLTLPLLC 178

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +    A   + +  T +      +  N+ A   L   ++      +       G+A    
Sbjct: 179 LGGTVALTAVLMNHTRLGRQIYAMGGNRDAASRLGMNLLRLHFYVYGYMGILAGVAAVVQ 238

Query: 250 AASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNF 303
           A     ++P+       + V++ V+L      GG  +L+       +L  +      +  
Sbjct: 239 AQITQSVAPNSL-LGFELTVLAAVVLGGTSMAGGRGTLTGTLLGVILLAFLQNGLTLLGV 297

Query: 304 YYFNSLLKFDCSF 316
             +   +      
Sbjct: 298 SSYWHTVLSGLII 310


>gi|254471034|ref|ZP_05084437.1| inner-membrane translocator [Pseudovibrio sp. JE062]
 gi|211960176|gb|EEA95373.1| inner-membrane translocator [Pseudovibrio sp. JE062]
          Length = 342

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 49/343 (14%), Positives = 107/343 (31%), Gaps = 51/343 (14%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-------------- 84
           I +   +   Y + A GL+++ G+LG+++      + +GA+  V                
Sbjct: 8   ILNGLDKGGAYALIALGLTLIFGTLGVVNFAHGALFMLGAFCAVAFNHVISLEKVVVDPT 67

Query: 85  ------------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
                                    +    S+ L I ++  +    G IM    ++    
Sbjct: 68  KTTAWGTPLEIRVPYLESWLGDTGATMLNYSVPLSILLAIPVMLLVGYIMERGLIRHFYK 127

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
                 ++++     +L +      G   I  A      G     ++    F    V+Y 
Sbjct: 128 RPHAEQILVTFGLAIVLQEIVKTYFGANPIPQAAPDVVRGAMDLGVV--LGFDPGTVVYP 185

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
            +    L     +  ++  +L+ T      R    +++    L   I       FA+++ 
Sbjct: 186 QWRIVYLFFSLSVIGAVFAFLQFTTFGMVVRAGMADRETVGFLGINIERRFTLVFAIAAV 245

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             G+AG  +             F     V+ +V    M SL     A  +L  +      
Sbjct: 246 VAGLAGVMYTPILPPDYHMGMDFLVLSFVVVVVGG--MGSLPGAVSAGFLLGILQS---- 299

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                F S+ +           ++ +   +++L+R   L+  +
Sbjct: 300 -----FASMNEVKTILPGIDQIIIYLVAVIILLVRPRGLMGRK 337


>gi|317401156|gb|EFV81805.1| hypothetical protein HMPREF0005_01227 [Achromobacter xylosoxidans
           C54]
          Length = 300

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 90/312 (28%), Gaps = 24/312 (7%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
               Q+ + S  +   +Y + A  + I+  +  + +      + +G Y  + L    G  
Sbjct: 7   WLFLQQGVLSGLVTGSVYALLAVAVVIIFKTTDVPNFAQGEIFMVGGYVALFLTLVMGWP 66

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
              +IPV+  +      +     ++          +    +   ++I    +     G+ 
Sbjct: 67  YLAVIPVTLAVVAVVSGLFQRVVMER--------VIASRGVGVQMVIATLGLAYALKGLV 118

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
               L     ++  L           +       +      +   + +    T +  A R
Sbjct: 119 RQTGLGDTPRSLPPLAPTDAILIGDAVLTQLDLVIFAVAVGVMLLLYVMFTYTRVGKAMR 178

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +  N KA   +   +   ++  +A+S     +A                          
Sbjct: 179 AVGMNPKAARLVGVNLTRIRMMVWALSGLISAVAALLITPKILITPDIGHIAILAYAAAI 238

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
              +GG+TSL        ++     L           +  F             +A+ +V
Sbjct: 239 ---VGGITSLPGAVVGGFVIGVAENLVGLFISTNAIVVAPF-------------VAIMVV 282

Query: 332 ILMRSHSLLRLR 343
           +L+R   LL  +
Sbjct: 283 LLLRPQGLLGGK 294


>gi|325674014|ref|ZP_08153704.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Rhodococcus equi ATCC
           33707]
 gi|325555279|gb|EGD24951.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Rhodococcus equi ATCC
           33707]
          Length = 294

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 106/311 (34%), Gaps = 27/311 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI--WLLI 96
           + +      I ++ A GLS+  G +G++++        G+Y+  ++      +    L+ 
Sbjct: 8   LFTGLSIGSILLLAALGLSLTFGQMGVINMAHGEFIMAGSYTAYVVQQVVSSAGASLLIS 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V   + G    ++   +L  R  +  + TL+++     +L +      G   + V    
Sbjct: 68  LVVGFVVGGLMGVLLEATLIRRMYHRPLDTLLVTFGVGLVLQQLARDIFGAPAVNVVAPT 127

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           +  G                 +      ++L+      A +   L +T++    R +  N
Sbjct: 128 WLTG----------GVEILGAVVPKTRIFILVLAIVAVAVLSFALAKTSMGRRIRAVVQN 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +    +   +     ++ F + S   G+AG   A +    +      S  I    +V++G
Sbjct: 178 RDLAETSGISSRRTDVTTFFIGSGLAGVAGV--ALTLIGSTSPTIGQSYLIDAFLVVVIG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+  LS    A   L  +                    +       ++ + + + + +R 
Sbjct: 236 GLGRLSGAVVAAFALGILNSFIEY-------------STTASIAKVIVFVLIVIFLQVRP 282

Query: 337 HSLLRLRTPSN 347
             L   +T S 
Sbjct: 283 QGLFVAKTRSL 293


>gi|292494155|ref|YP_003533298.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haloferax volcanii DS2]
 gi|291369127|gb|ADE01357.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haloferax volcanii DS2]
          Length = 313

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 101/318 (31%), Gaps = 27/318 (8%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW---- 93
           ++        +Y++ A GLSIV GSL  +++   + Y  GAY  +++ S           
Sbjct: 9   FLFIALSVASLYLLVAVGLSIVFGSLKYVNMAHGVLYLSGAYIGLLIASSEQYGGLLSDF 68

Query: 94  ------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN-ILIKWKPITNG 146
                      + +++     ++G+   ++         L+   +    ILI  + +   
Sbjct: 69  GQVGLDWGFVPALVLTPVVIFVVGVAMERWIAKPFYERELLDQLLVTFGILIAAQELVAI 128

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             G            T    +     P            V+     L A I  + + T  
Sbjct: 129 LFGRTGTIYPRPEWLTGAISLPVIGTPPGMSAASTIRVLVVALTLLLVAGIFAFFKYTDY 188

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A R   ++ +    L   I    L  FAV +A+ G+AG    +  +  S         
Sbjct: 189 GLAVRAGTEDSEMTQMLGIRIGRPFLLIFAVGAAYAGLAGVLGGSLFNVTSE--IGMEII 246

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I  + IVI+GG+ SL        +      +   +      +               + +
Sbjct: 247 IPSLVIVIMGGVGSLRGTVVGALLAGLTFAVATELEPSMTQAS--------------IYL 292

Query: 327 ALFLVILMRSHSLLRLRT 344
              +V+ +R   +     
Sbjct: 293 LAIVVLTIRPSGIFPSAE 310


>gi|295677100|ref|YP_003605624.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295436943|gb|ADG16113.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 312

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 52/315 (16%), Positives = 113/315 (35%), Gaps = 22/315 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M + GL+++   LG+L+      Y +GAY             W  + V
Sbjct: 8   LLNGLSYGLLLFMLSAGLTLIFSMLGVLNFAHASFYMLGAYVG--FSVAARAGFWSALVV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  G  +    L+    +  +  L+++     +L +   +  G +          
Sbjct: 66  APLVVGLLGAALERWLLRRVRGHGHLPELLLTFGAAYLLGELVKLGWGHS---------P 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L  T+ +++    F     ++  +  +++     + A+++  LR +      R    + +
Sbjct: 117 LSATIPAVLDGPLFSLYGAVFTRYRAFMMAVSLAMLAALVAMLRVSKTGLIVRAALTHAQ 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  +L   +       FA  +A   +AG   A     +       S   +V  +V++GG+
Sbjct: 177 AVEALGHNVPRVFTGVFAAGTALAALAGVIGAPL--FVIEPAMAESLGSLVFVVVVIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT---------TLMVIALF 329
            SLS    A+ ++  V  L    +    +++                      L  + L 
Sbjct: 235 GSLSGALVASLLVGCVQTLAVASDLSLGDAMSLAGAVLPPEWDALTLAQVAPLLPYLLLV 294

Query: 330 LVILMRSHSLLRLRT 344
            V+ MR   L   R 
Sbjct: 295 AVLAMRPRGLFGRRD 309


>gi|269929013|ref|YP_003321334.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
 gi|269788370|gb|ACZ40512.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
          Length = 298

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 90/304 (29%), Gaps = 21/304 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      +Y + A G +++ G L          Y + A+  + +   +     L   +
Sbjct: 10  LVSGLAIGGVYALVALGFALIFGVLRAAQFAHGEVYMVVAFLVLAVLPWFPALGALQFLL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +   G I G+   +     LA A  I   I    L+             VA     
Sbjct: 70  VIVAAAVFGAIAGMLIERGVFRPLADAPHIAPIISTIGLMILLQ-------NLVAYLKGS 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                         P       +    +      + A + + L RT +  A R    + +
Sbjct: 123 ELHRFALAWPQGNVPVGPASVPVLKLVIFGTALVIPALLQVALARTQLGRAIRATAIDAE 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        L AFA+ SA  G+AG    A    +   M   +  +   +  I+GG+
Sbjct: 183 TARLMGVNTARTSLVAFAIGSALAGIAGVLVGALYGVVYSTM-GVTALVKGYAATIIGGV 241

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L        +L              +                ++   L +++ +R   
Sbjct: 242 GNLVGAVAGGLLLGIFEVFVASYVSPRWTDA-------------IVYTLLIVLLALRPQG 288

Query: 339 LLRL 342
           L+  
Sbjct: 289 LVGR 292


>gi|260913344|ref|ZP_05919825.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Pasteurella dagmatis ATCC 43325]
 gi|260632575|gb|EEX50745.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Pasteurella dagmatis ATCC 43325]
          Length = 347

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/295 (11%), Positives = 89/295 (30%), Gaps = 8/295 (2%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             S   I ++ +Q+ I  + + G++ V+   G + L+     A+ A    +         
Sbjct: 36  FLSANNIMNILLQVSIICVISVGMTYVI-LTGGIDLSVGSIVALSAVCLGVFTHWGMN-- 92

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           WL    S++      +   L ++        +  L++        I    +     G+ +
Sbjct: 93  WLGETPSSLAVLLVVIAAVLGAIFVGVLCGYVNGLVIVYGKVTPFITTLGMMGIARGLAL 152

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                        ++RF       +     +   ++    +       L +T        
Sbjct: 153 TISDGKTIYNFPDMLRFLGNGRISLTETFAIPVPVIIAAIVVLVSFYVLTQTMFGRQIYA 212

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +  N++A       +   ++ A+ ++ A   +         +   P      E   + + 
Sbjct: 213 LGGNREAVRLSGINVEKLEIKAYVINGALAAVGAVILVGRLNAAQPIAGNGYELDAIAAT 272

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI     +GG+ S+   +    I+  +      +N   +   L       +    
Sbjct: 273 VIGGTSLIGGVGSVISTSIGALIMGVLQNGLTLLNVTSYLQRLIIGLVIILAVFL 327


>gi|323182533|gb|EFZ67937.1| ribose transport system permease protein rbsC [Escherichia coli
           1357]
          Length = 321

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 89/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +     + +    +   + +                   Q 
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALTLGAAIGAVTGMIVAKGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        +     ++G+ FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A       +   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|300712467|ref|YP_003738280.1| inner-membrane translocator [Halalkalicoccus jeotgali B3]
 gi|299126151|gb|ADJ16489.1| inner-membrane translocator [Halalkalicoccus jeotgali B3]
          Length = 289

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 103/303 (33%), Gaps = 27/303 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               +   + A GL+++ G + +++      Y  GAY + +L +    S WL + ++ +I
Sbjct: 13  LQLGVTLALVATGLTLIFGMMDVINFAHGALYMFGAY-FGLLVADALGSFWLALVIAPLI 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
            GA G  + + SL+       +  ++++     ++        G     +          
Sbjct: 72  VGAIGAAIEIFSLRPLYGRNPLYHILLTFGLAIMVQGIVVQVWGARSRRIPAP------- 124

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +         V Y ++  +VL+    L A++ + + R+ +    R    + +   +
Sbjct: 125 ---ELLAGSVSVGPVTYPVYWLFVLVLSTVLIAAVWVAIERSDLGILMRASAHDTEMVDA 181

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   +       F   S    +AG    ASR         F   I    IV++GG+ S  
Sbjct: 182 LGIDVKTVFTGVFVFGSVLAAVAGVLLGASRSV--HPGMGFGVIIEAFVIVVIGGLGSFK 239

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A  ++  V+     +     +                +   +  V++++   L   
Sbjct: 240 GAIYAALLIGLVIAYGALIAPALTD--------------LFIFALMATVLVIKPSGLFGT 285

Query: 343 RTP 345
              
Sbjct: 286 TEA 288


>gi|209546531|ref|YP_002278449.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209537775|gb|ACI57709.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 345

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 62/300 (20%), Positives = 119/300 (39%), Gaps = 10/300 (3%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           LL V   + LF  + A  +  +  S     +   +   GL+I+ G LGL+SL       +
Sbjct: 24  LLHVPVTMALFAAVVALLANSFWLSAATSAVALSLSVAGLAILYGQLGLVSLCQFALVGV 83

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G +  + +G  +     + +    +++ A G+  G+P+L+ RG YLA+ TL+++  FQ I
Sbjct: 84  GGWVTLRIGHAFHPPFEVSLLAGGIVASAVGLAFGVPALRLRGLYLALVTLMLAGAFQII 143

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           +  W     G                     R      +    E+  +  +     +   
Sbjct: 144 ISAWGFPDGGPG----------FLGRADGSGREMLARPAMADGEVAYFLYVCAAAAVGLL 193

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           I  W +      AW  IR  +    +    ++  K  AFA+S    G+AG   A +  ++
Sbjct: 194 IAQWHKLARPGRAWALIRKGETVAVASGVNVLIYKAWAFALSGLLAGLAGGLLAGNVGQL 253

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
               F   E++ + ++ I+GG+ +      A  +L  V  L   +    + ++  F  + 
Sbjct: 254 DGRAFGAFESLNLFALAIVGGVFNWYGALIAGLLLRAVPALLTDLGIDGYVTIGIFGVAL 313


>gi|149182626|ref|ZP_01861095.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus sp. SG-1]
 gi|148849649|gb|EDL63830.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus sp. SG-1]
          Length = 288

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 95/304 (31%), Gaps = 27/304 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     ++  + A GL+++ G + +L+      +  GA+S  +       S W  I V+
Sbjct: 11  INGLATGMLIFLLAAGLTLIFGLMDVLNFAHGGLFVWGAFS-GVWAYNMTESFWFGIIVA 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +     G       ++          LI   +   +    K +                
Sbjct: 70  IITGLLLGAATEYLIIRPVYGNHTQQILITLGLMLVLSEMIKVVFGPDQKAANPPPFLEG 129

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                       F    VI   +  +++L    + A     L+RT I    R    N++ 
Sbjct: 130 -----------SFMIGDVILIKYRLFIILVGLIVFAVTSFILKRTKIGLIVRAGVMNKEM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   I    +  F V +A   + G   A     I  +M      I+   +V++GGM 
Sbjct: 179 VQTLGINIRVVFMLVFMVGAAMAALGGMLMAPYSGVIYAEM-GLEFGILAFIVVVIGGMG 237

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S      A  ++                               + ++ + +V++ R   L
Sbjct: 238 SFLGSLLAAILVGLAQAYMAYY--------------VPALSLAVNMLLMTVVLIFRPQGL 283

Query: 340 LRLR 343
            +++
Sbjct: 284 FKVK 287


>gi|84687179|ref|ZP_01015060.1| ABC branched-chain amino acid transporter family, inner membrane
           subunit [Maritimibacter alkaliphilus HTCC2654]
 gi|84664767|gb|EAQ11250.1| ABC branched-chain amino acid transporter family, inner membrane
           subunit [Rhodobacterales bacterium HTCC2654]
          Length = 433

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 63/344 (18%), Positives = 118/344 (34%), Gaps = 21/344 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           VV+ L + L++     Q Y      +     + A+ +        L         A+   
Sbjct: 91  VVFALFVGLWVILGAVQIYKRMTPGKTRTLALLAFLIVGFFVYRALFDPAVQAIEAVNPA 150

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           S   LG      + L  PV  +++      +G  +L  R DYLAIATL +SEI   +L  
Sbjct: 151 SQGFLGGLGLP-VILAWPVGGLLAAGAAWAIGKTALGLRSDYLAIATLGISEIIVAMLKN 209

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +  G   +    R       ++    F  +  S     +    V++ + +    + +
Sbjct: 210 EDWLGRGVKNVVGLPRPVPYEIDLQQSAGFVDWAQSIGADPVSTSAVVVKLGYAGLFLAV 269

Query: 200 WLR---------RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
            L          R+      R IRDN+ A  ++   +    L  F + SA +G+AGA   
Sbjct: 270 LLVLIWMSEMALRSPWGRMMRAIRDNEVAAEAMGKDVTRRHLQIFILGSAVVGIAGAMMT 329

Query: 251 ASRDRISPDMFKFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
               +++P  ++      +V  +VI+GG  +         ++         M     + +
Sbjct: 330 TLDGQLTPASYQPLRFTFLVWVMVIVGGSGNNWGAVLGGVVIWFFWVQVEPMGQALMDLV 389

Query: 310 LK----------FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                          S        M + + LV+      L+  +
Sbjct: 390 TAGMSEGPLKSHLLGSAAHMRLFTMGLIMLLVLRFSPRGLIPEK 433



 Score = 39.9 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 37/96 (38%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +       LL L  G  +S     ++    LI  + A G+++  G  GL ++  +   A+
Sbjct: 8   IGLFAAVGLLILGTGVFQSWNLALTILNMGLISAIMALGVNMQWGYAGLFNVGIMGFTAL 67

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112
           G  + V+         W    +  + +   G+ + L
Sbjct: 68  GGLAVVVTSIAPVGEAWSAGGLRVVFALFVGLWVIL 103


>gi|330971584|gb|EGH71650.1| high-affinity branched-chain amino acid ABC transporter permease
           BraD [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 255

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 78/265 (29%), Gaps = 22/265 (8%)

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A         +   I   +  + +++G  G ++   + K   +   +A LI +     IL
Sbjct: 7   AVLSFFGLESFPFLILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLIL 66

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
             +  I+ G     V   L                   FV       ++L+        +
Sbjct: 67  QNYAQISQGARQQGVPTLLEGAWRFEIGN--------GFVQITYTKIFILIAAFVGMGVL 118

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              ++ T +    R  + ++K    L           F + +A   +AG     +     
Sbjct: 119 TYIIKYTKLGRMCRATQQDRKMASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFD 178

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
                F   I   +  +LGG+ SL        IL        G+    +  +  F     
Sbjct: 179 FYA-GFIIGIKAFTAAVLGGIGSLPGAMLGGLILGVAESQFSGLINSDYKDVFSFG---- 233

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                     L L+++ R   LL  
Sbjct: 234 ---------LLVLILIFRPQGLLGR 249


>gi|312126372|ref|YP_003991246.1| inner-membrane translocator [Caldicellulosiruptor hydrothermalis
           108]
 gi|311776391|gb|ADQ05877.1| inner-membrane translocator [Caldicellulosiruptor hydrothermalis
           108]
          Length = 337

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/314 (12%), Positives = 96/314 (30%), Gaps = 7/314 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + +   +++        S +    + +Q     + A G+S+V+   G + L+   A 
Sbjct: 16  IYFILLALIIVIAFISPDFLSWRCFRDILLQSSTRAIIALGMSLVL-ITGGVDLSAGRAV 74

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     +      +      +  +      +I    +L F        + +    F 
Sbjct: 75  GLAAVVSASMLQTADYARRFFPELPQLPLIVPILIAMAITLLFGIVNGVAISRLNLPPFI 134

Query: 135 NILIKWKPITNGKAGIYVADRL-YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             L     I    +  +            +RS           +  E  + Y+L+    +
Sbjct: 135 ATLGSMVIIYGANSLYFNLPPNNSQPIGGLRSDFTNLGTGYIGISGEYSIPYILIIALIV 194

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  + + L +TA+  +   +  N  A       +    +  +A +    G+AG   AA  
Sbjct: 195 ALVVWVLLNKTALGKSIYAVGGNVNAARVSGINVSKVLIFVYAFAGLLYGLAGVLEAART 254

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              + +     E   + + V+      GG+ ++  +     I   +      +    +  
Sbjct: 255 GGATNNYGNMYELDAIAACVVGGVSTTGGIGTVPGVLAGVLIFGVINYGLTFIGVDPYWQ 314

Query: 309 LLKFDCSFNMRHTT 322
           L+       +    
Sbjct: 315 LIIKGLIIGVAVAL 328


>gi|293603204|ref|ZP_06685637.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292818435|gb|EFF77483.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 293

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 93/304 (30%), Gaps = 23/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   IY +   GL++V G L +++        +GAY    L    G++  + +P+
Sbjct: 9   LINGLILGAIYGLIGVGLNVVFGVLRVVNFAHGEFLVLGAYFAFYLMEYAGINPLIALPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G ++    +             +  +F   ++          G  +      
Sbjct: 69  AFAAFFLAGYLLYFVLIPRLSKADDPEISSLLLMFGVSIM---------LGALMLLAFDA 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              ++   I         V+        L+    + A++ ++L RT +  A R I  N+ 
Sbjct: 120 DARSLPYEIEPVFLKFGPVLIPTVRLLALVIALAIIAALTVFLYRTQLGRALRAIIMNRD 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +          AF +       +G   A      SP M      +I   +++LGG+
Sbjct: 180 AVRIVGINAERLSAVAFGLGVGLAAASGVLVAMVFPAFSPFM-GNDYTLIGFIVIVLGGL 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                      +     ++          ++  F               +   I +R   
Sbjct: 239 GHPVGALVGALLFGITEQVSVVFFSPSIATICGF-------------ALMVATIFIRPSG 285

Query: 339 LLRL 342
           L   
Sbjct: 286 LFGR 289


>gi|110679854|ref|YP_682861.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
 gi|109455970|gb|ABG32175.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
          Length = 438

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 96/274 (35%), Gaps = 21/274 (7%)

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + L  PV  + + A   ++G  +L  R DYLAIATL ++EI   +L     +  G   +
Sbjct: 165 WVTLAWPVGGLFAAAAAWVIGKTALGLRSDYLAIATLGIAEIIIAVLKNEDWLARGVKNV 224

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS---------IILWL 201
               R       +++   F    + F +  +    + + + +             +    
Sbjct: 225 VGLPRPTPNEIDLQNDPAFVERAAGFGVDAVTASTLYVKLMYAGLFTVVLVVLLVLAQRA 284

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +      R IRDN+ A  ++   +    L  F + SA  G+AGA       +++P  +
Sbjct: 285 LHSPWGRMMRAIRDNEVAAEAMGKDVTARHLQIFVLGSAICGIAGAMMTTLDGQLTPGTY 344

Query: 262 KFS-ENIIVISIVILGGMTSLSKIAKATAILI-----------GVVELCCGMNFYYFNSL 309
           +      +V  +VI+GG  +         ++             ++EL            
Sbjct: 345 QPLRFTFLVWVMVIVGGSGNNFGAILGGFLIWFLWVQVEPMGLWLMELITSGMPDGSALK 404

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                S        M + L LV+      L+  +
Sbjct: 405 AHLIDSAAHMRLFTMGMVLLLVLRFSPRGLIPEK 438



 Score = 38.7 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 37/91 (40%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +       + L+ G T+S      +    LI  + A G+++  G  GL ++  +   A+G
Sbjct: 9   MLFAIVGAMILYTGFTQSWNTALVIVNMGLISAIMALGVNLQWGFAGLFNVGIMGFVALG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
             + V++G+      W     + + +    +
Sbjct: 69  GLAAVLIGAPPTPGAWSAGGWNILSAFVFAL 99


>gi|261757149|ref|ZP_06000858.1| branched-chain amino acid ABC transporter [Brucella sp. F5/99]
 gi|294853913|ref|ZP_06794585.1| branched-chain amino acid transport system permease [Brucella sp.
           NVSL 07-0026]
 gi|261737133|gb|EEY25129.1| branched-chain amino acid ABC transporter [Brucella sp. F5/99]
 gi|294819568|gb|EFG36568.1| branched-chain amino acid transport system permease [Brucella sp.
           NVSL 07-0026]
          Length = 278

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 46/280 (16%), Positives = 105/280 (37%), Gaps = 29/280 (10%)

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                 AY        +G+S  L + +  + + A G+++G  +++ +G Y  + TL +++
Sbjct: 25  GFLRGAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQ 84

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +F    ++                       ++ + R F F    +   + MYY +L + 
Sbjct: 85  MFFFFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVF 130

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L    I  +  +      +++R+N+    SL  ++   KL+AF +S+   G+AG   A 
Sbjct: 131 VLGVFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKAL 190

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                +     +  +  VI + +LGG+ +L       A ++ +       +F        
Sbjct: 191 VFQFATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV------ 244

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                    T +  +     +L+    ++     S   ++
Sbjct: 245 ---------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 275


>gi|209886609|ref|YP_002290466.1| inner-membrane translocator [Oligotropha carboxidovorans OM5]
 gi|209874805|gb|ACI94601.1| inner-membrane translocator [Oligotropha carboxidovorans OM5]
          Length = 304

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 42/293 (14%), Positives = 94/293 (32%), Gaps = 2/293 (0%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           ++ +  +  ++Y + A G ++  G L ++  +      +GA+S  ++       + L +P
Sbjct: 7   FVFNGAVLGIMYALVAVGFTLFFGVLDVIKFSHGDVLTLGAFS-GLIAFLALQLVGLDLP 65

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
              +I       +   ++      L +  +  S  F  +L+     T  +  I +     
Sbjct: 66  FLGLIFVLLVACLVTGAIGAGIGQLFVIPMRNSSAFNILLMTLMIGTVIRESIRLFYPNG 125

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                  SL+         V   +    +L     +       +R T +  A R +  + 
Sbjct: 126 ANPKAFPSLLPKTPIELGGVFLRLDSLILLALGFAVVFLTHWLIRHTKLGLAIRAVAQDG 185

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               ++        L+ FA+ S   G+AG         I+         II  S  ++GG
Sbjct: 186 DTAQAMGIPFRRTVLATFALGSLLAGIAGVMHGIYYSEINF-SVGLLLGIIGFSAAVVGG 244

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           + S+            +  L   +          F  +  +   T+    +  
Sbjct: 245 LGSIWGAIIGGFTFAALQTLWVVVFPDASGYRDVFAFAAIIIAMTIFPTGIIA 297


>gi|146340780|ref|YP_001205828.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. ORS278]
 gi|146193586|emb|CAL77603.1| putative branched-chain amino acid ABC transporter, permease
           protein [Bradyrhizobium sp. ORS278]
          Length = 309

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 72/328 (21%), Positives = 128/328 (39%), Gaps = 38/328 (11%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  +    ++   L  +    Y+  +        +FA    ++ G  G ++        +
Sbjct: 9   LFWIGALTVIVALLLPSYVSGYVLGLLTVAYYTAVFAMSWDLLFGFAGEVNFGPTFLIGV 68

Query: 77  GAYSYVILGSRYGL--SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           GAY+  IL + Y    SIW+ I   A+ +   G+++ LP+L+  G Y  + TL+   + Q
Sbjct: 69  GAYTAGILDAHYSPGLSIWICIAAGALAAVVGGVVLALPALRVSGPYFGLTTLVAVLMLQ 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           N ++    +T G+ G+ V D +     T                     Y++ LG   +S
Sbjct: 129 NFIVVAAGLTGGEIGLAVPDVISIDAKT--------------------NYWIALGFMLVS 168

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +I+  L R+AI    +    ++    +L   +   KL+AF VS+ F G+AGA       
Sbjct: 169 GAILFGLSRSAIGLILQASGQDKIQAGALGFNVTKHKLAAFVVSAFFSGLAGALMVFYMG 228

Query: 255 RISPDMF-KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             S   F      + +I   +LGG  ++   A     LIG+ EL   +            
Sbjct: 229 TASVSTFVDVGVGVQIIIAAVLGGRRTVIGAAIGAIFLIGMGELLRPLGE---------- 278

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  T ++ +   +VIL      L 
Sbjct: 279 -----LATLIVSVIALVVILFFPDGFLG 301


>gi|213971247|ref|ZP_03399364.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301383903|ref|ZP_07232321.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302063606|ref|ZP_07255147.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato K40]
 gi|302131015|ref|ZP_07257005.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213924000|gb|EEB57578.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
          Length = 380

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 82/332 (24%), Gaps = 40/332 (12%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------------ 84
            +   +  + L     A G+ ++ G  G+LSL   I + +G+Y   +             
Sbjct: 52  DFRLGLAGKYLSLAFCAVGMVMIWGYGGILSLGQGIFFGLGSYMMAMYLKLEATATDEAA 111

Query: 85  ----GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                         +I  S              +       +  A L     +     + 
Sbjct: 112 SALAAFYGSALPDFMIWNSVEALPWWWKPFESATFTLAAILILPALLAFLFSYAYFKKRV 171

Query: 141 KPITNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             +                I            +      F            +Y +   +
Sbjct: 172 GGVYFSIITLSLASIMSIMIIGQQGYTGGVNGLTDFKTVFGLSLQTKQTPWILYLITTLL 231

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              S ++  ++ R+ +      IRD +             K   FAV++    + G  F 
Sbjct: 232 LLASVAMCGFILRSRLGKVIVAIRDREDRVRFSGYNTALFKAFIFAVAALISALGGVMFT 291

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                 SP +     +  ++    LGG  SL      T ++                   
Sbjct: 292 LQVGLASPSLVGIIPSTEIVIYAALGGRLSLVGAVYGTLLIGAAKTYLSE---------- 341

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +F       +      V+L     L  L
Sbjct: 342 ----NFVSFWQYFIGFLFMGVVLFLPTGLAGL 369


>gi|77464867|ref|YP_354371.1| branched chain amino acid ABC transporter inner membrane protein
           [Rhodobacter sphaeroides 2.4.1]
 gi|77389285|gb|ABA80470.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Rhodobacter sphaeroides 2.4.1]
          Length = 292

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 93/304 (30%), Gaps = 30/304 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   +  + A GLS+V G L ++++     + +GA +   +         L   V+ + 
Sbjct: 15  LVGAAVLALTASGLSLVFGVLRVVNVAHGEFFMLGAVTAWFVSQWVPGPPALAFAVALVA 74

Query: 103 SGACGMIMGLPSLKF---RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                  +   + +    R  Y   AT+I +     IL +      G     V       
Sbjct: 75  CPLLVAGLAALADRLVLKRLAYEPEATIIATIGLLYILQQAALTLYGPEARPVPPPFE-- 132

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                      R    +  +  +  +V+     + A + L L R+ I    R  + +++ 
Sbjct: 133 ----------ARLQLPWFGWSGYKLFVIGAAGAVLAGLWLLLARSRIGLVMRATQIDRET 182

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +    +     + FA+ +A   +A       +      +      ++   +V++GG+ 
Sbjct: 183 ASAFGIDVDRVYAATFALGAALAAIAAVLIVPIQQA--HYLMGGDPLLLSFIVVVIGGLG 240

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           SL     A  ++     +           +L       +                R   L
Sbjct: 241 SLRGTLVAALLIGVSDGVISTFFEPTLAKILATLLVALVLV-------------FRPQGL 287

Query: 340 LRLR 343
              R
Sbjct: 288 FGAR 291


>gi|163731877|ref|ZP_02139324.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
 gi|161395331|gb|EDQ19653.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
          Length = 438

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 96/274 (35%), Gaps = 21/274 (7%)

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + L  PV  + + A   I+G  +L  R DYLAIATL ++EI   +L     +  G   +
Sbjct: 165 WVTLAWPVGGLFAAAAAWIIGKTALGLRSDYLAIATLGIAEIIIAVLKNEDWLARGVKNV 224

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS---------IILWL 201
               R       +++   F    + F +  +    + + + +             +    
Sbjct: 225 VGLPRPTPYEIDLQNDPAFVERAAGFGVDAVTASTLYVKLMYAGLFTVVLVVLLVLAQRA 284

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +      R IRDN+ A  ++   +    L  F + SA  G+AGA       +++P  +
Sbjct: 285 LHSPWGRMMRAIRDNEVAAEAMGKDVTARHLQIFVLGSAICGIAGAMMTTLDGQLTPGTY 344

Query: 262 KFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR- 319
           +      +V  +VI+GG  +         ++  +      M  +    +       +   
Sbjct: 345 QPLRFTFLVWVMVIVGGSGNNFGAILGGFLIWFLWVQVEPMGLWLMQLITSGMADGSALK 404

Query: 320 ----------HTTLMVIALFLVILMRSHSLLRLR 343
                         M + L LV+      L+  +
Sbjct: 405 AHLIESAAHMRLFTMGMVLLLVLRFSPRGLIPEK 438



 Score = 38.3 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 37/91 (40%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +       + L+ G T+S      +    LI  + A G+++  G  GL ++  +   A+G
Sbjct: 9   MLFAIVGAMILYTGFTQSWNTALVIVNMGLISAIMALGVNLQWGFAGLFNVGIMGFVALG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
             + V++G+      W     + + +    +
Sbjct: 69  GLAAVLIGTPATPGAWSAGGWNILSAFVFAL 99


>gi|167623937|ref|YP_001674231.1| monosaccharide-transporting ATPase [Shewanella halifaxensis
           HAW-EB4]
 gi|167353959|gb|ABZ76572.1| Monosaccharide-transporting ATPase [Shewanella halifaxensis
           HAW-EB4]
          Length = 345

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 48/338 (14%), Positives = 106/338 (31%), Gaps = 29/338 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFL---------GATKSQKYIDSMGIQILIYVMFAWGLSI 58
           L+KY  +L  L +   + +   L             +Q  + S+  Q+ I  + A G++ 
Sbjct: 22  LHKYGIVLAFLFICATIAVLGELCIHNGMWDSNYFLTQANLLSVLRQVSINGILAVGMTF 81

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           V+   G + L+     A+         +     +        ++     + +G       
Sbjct: 82  VIIVAG-VDLSVGSVLALAGIVAARFVTNSSNMLIGGFDSPILLPLMVAICIGAICGFLN 140

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           G  ++   L            +       +       L   G  V SL R FR   +   
Sbjct: 141 GYIISKFRLQA----------FIVTMGMLSVARGMTMLTTDGNPVSSLDRGFRALGNSYT 190

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
           + I    V+  + F +A  +L   +T        +  N+K+  +    +   K++ + + 
Sbjct: 191 FGIPTPVVIFAVIFAAAWFLLN--KTVFGRYVFAVGGNEKSAQTSGIDVHKVKVAVYTLC 248

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
                +AG    A           F   +  I+ V++GG +       A  +      L 
Sbjct: 249 GVTAAIAGLILTARTGSAQ-TSAGFGYELDAIAAVVIGGTS------MAGGLGTLTGTLF 301

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
             +     N+ L      +     +  + +   +++  
Sbjct: 302 GVLIIGVMNNGLDLLGVQSYYQQIIKGLLIVAAVMLDP 339


>gi|163857628|ref|YP_001631926.1| putative permease component of branched-chain amino acid transport
           system [Bordetella petrii DSM 12804]
 gi|163261356|emb|CAP43658.1| putative permease component of branched-chain amino acid transport
           system [Bordetella petrii]
          Length = 626

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 57/309 (18%), Positives = 126/309 (40%), Gaps = 33/309 (10%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+  +  +ILI  +FA  L  ++G  G+ S      + +GAY   +L     L +   +
Sbjct: 345 PYLTVLFTEILIAALFAASLHFLIGPAGMTSFGHAAWFGLGAYGAALLLKLAALPMEAAL 404

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               + +    ++ G   ++  G YLA+ TL +++I   ++ +W  +T G  G       
Sbjct: 405 LAGPLAAALGALLFGWFCVRLSGVYLAMLTLAVAQILWALVYQWDSVTGGSNG------- 457

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                          +PS ++   +  YY  L +C    + +  L  + +  A R  RD+
Sbjct: 458 -----------LIGLWPSDWLSSGLAYYYASLALCAAGIAWLRRLVFSPLGYALRGARDS 506

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                ++   +   + + F  ++   G+AG+ +A S+  I+PD+     ++  + +V+LG
Sbjct: 507 ALRAQAIGIDVQRVQWAGFTAAAMAAGLAGSLYAFSKGSIAPDVLGVGRSVDGLVMVLLG 566

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +L+      A    + +    +  Y+                 ++ +A+  +++ R 
Sbjct: 567 GVQALAGPLAGAAAYTWLQDTAARLTEYWHA---------------VLGLAVLALVMARP 611

Query: 337 HSLLRLRTP 345
             L  +   
Sbjct: 612 DGLAGIARR 620



 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/294 (15%), Positives = 99/294 (33%), Gaps = 18/294 (6%)

Query: 51  MFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS---IWLLIPVSAMISGACG 107
           + A GLS++ G   +++      Y +G Y    L +  G S    W  +P++A+  G  G
Sbjct: 22  LVAAGLSLIFGVTRIVNFAHGSFYMLGVYLACTLTAWLGGSALGYWAALPLAALAVGGLG 81

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
             + +  L+       +  L+ +     I+        G A ++ A      G       
Sbjct: 82  AAIEILVLRRIYHAPELFQLLATFALVLIIGDAALALWGPADLFAARAPGLGGA------ 135

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                      +  +   ++     +   + L L RT      R   +N+    +L    
Sbjct: 136 ----VEILGRRFPQYDLLLIALGPLVLGLLWLLLMRTRWGRLLRAAAENRSMLAALGVNQ 191

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
            +   SAFA+ +   G+ GA  A                     +V++GG+ S+     A
Sbjct: 192 AWLFTSAFALGAFLAGLGGAMAAPRTPA--TLGLDLEIIASAFVVVVVGGLGSVPGAFLA 249

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             ++     +     +     +  +  + +          + +V+++R   LL 
Sbjct: 250 ALLICLAKAV---FVYAGQTQIGPWTFNLSKLTLVAEFAVMAVVLVLRPWGLLG 300


>gi|162452302|ref|YP_001614669.1| ribose ABC transporter permease [Sorangium cellulosum 'So ce 56']
 gi|161162884|emb|CAN94189.1| Ribose transport system permease protein [Sorangium cellulosum 'So
           ce 56']
          Length = 378

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 45/332 (13%), Positives = 96/332 (28%), Gaps = 25/332 (7%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +    +  L +   L   L  G     + ++++  +  ++ + + G   V+   G + L
Sbjct: 25  RRKVLGVFWLLLAVSLGTALLNGRFLLAENLENLIRRTALFGILSIGAGFVI-ITGGIDL 83

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+       L S       L +PV   IS   G+  GL   K R     +    
Sbjct: 84  SIGSVVALAGCMLPWLLSVQHWPASLAVPVLLGISLCIGLAHGLLITKLRLQPFVVTLCG 143

Query: 129 M--------------SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
           +              ++ F       + ++ G         L ++     S      F  
Sbjct: 144 LLLYRGTARGISGDQTQGFGVGFESLRYLSVGSPLSVPVPFLSWISEGRFSPYVVHPFTG 203

Query: 175 SFVIYEIFMYY----VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                    +       L    ++ +  ++L RT        +  N++A           
Sbjct: 204 VKTRLAPITWIDIPMPFLLFLAIAVAASIFLNRTVYGRYLMALGRNEQAARYSGVDTDRM 263

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKI 284
            + A+ + S      G  FA   +   P  F     +  I+  +LGG        ++  +
Sbjct: 264 TILAYVLCSVLACFGGMLFALEVNSAQPVDFGNFYELYAIAAAVLGGFSLRGGEGAVLGV 323

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
              TA++  +      +               
Sbjct: 324 ILGTALMQVLRNAINMLGVPTQIEFAVIGAVI 355


>gi|83955949|ref|ZP_00964460.1| hypothetical protein NAS141_03998 [Sulfitobacter sp. NAS-14.1]
 gi|83839713|gb|EAP78891.1| hypothetical protein NAS141_03998 [Sulfitobacter sp. NAS-14.1]
          Length = 353

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 83/313 (26%), Gaps = 18/313 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L     +   L      S   +  +  Q+ I  + A   S+V+ + G + L+     
Sbjct: 45  LIVLLASIAVFGLLLGSRFFSPFALTLILQQVQIVGIVAAAQSLVILTAG-IDLSVGAIA 103

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I +        RYGL   + +    +     G I G      +                
Sbjct: 104 VISSVVMGQFTFRYGLPAEVAVACGLIFGTLIGTINGWLVAVMKLPPFI----------- 152

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    I      +Y A+                     F +        ++ +  L 
Sbjct: 153 -VTLGMWQIVLAANFLYSANETIRSQEIAAEAPLLQLLGVKFNLGGAIFTLGVVFLLVLV 211

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L+ TA       + D+  A       +    +S +A++      AG        
Sbjct: 212 LVLAYVLKHTAWGRHVYAVGDDPDAAELSGVNVKKTIISVYAIAGLICAFAGWALIGRIG 271

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   +      + ++VI      GG  S+        I+                + 
Sbjct: 272 SVSPTSGQLLNIESITAVVIGGISLFGGRGSILGTFFGALIVGVFTLGLRLAGADAQWTY 331

Query: 310 LKFDCSFNMRHTT 322
           L            
Sbjct: 332 LLIGVLIIAAVAV 344


>gi|170740368|ref|YP_001769023.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168194642|gb|ACA16589.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 292

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 89/300 (29%), Gaps = 22/300 (7%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  LIY + A GLS++ G + +++        +  Y+   L     L   +L+P+ A +
Sbjct: 14  LLMGLIYALIAVGLSLIFGLMDVVNFAHGEFLMLAMYATFGLVLLTHLDPVVLMPLVAAL 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G    L  ++F       A    +      +     +     G             
Sbjct: 74  LFVLGAAAYLGVVRF-------AMRAKANQGMVQIFATFGLAILLQGAAQYLFTPDYRNV 126

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             + +         V       +  +        + L + RT    A    R++Q A   
Sbjct: 127 QNTWLGGRTLDLGGVFLPWPQIFGAVVSLAAFGGLHLLMSRTDFGRALEATREDQGAVAL 186

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           + + +A +G+AGA  A             S  +I    V LGG  S++
Sbjct: 187 VGIDRTRVFALGWGLGAALVGLAGAVLAVFYYI--HPQVGASFALIAYVTVALGGFGSVA 244

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A  ++  V      +      S+              +      V+ +R   L   
Sbjct: 245 GALVAGIVVGLVEAFTAVILPPSLKSVG-------------VYALYLAVVFVRPQGLFGR 291


>gi|86138927|ref|ZP_01057499.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85824574|gb|EAQ44777.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 437

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 95/273 (34%), Gaps = 21/273 (7%)

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
              + L  PV  +++     ++G  +L  R DYLAIATL ++EI   IL     ++ G  
Sbjct: 165 NWPVILSWPVGGLLAAGAAWLIGKTALGLRSDYLAIATLGIAEIIIAILKNEDWLSRGVK 224

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF---------MYYVLLGMCFLSASIIL 199
            +    R       +++   +  + + F +  +             +   +  +   +  
Sbjct: 225 NVVGLPRPVPYEVDLQNDPSYVEWFAGFGMDPVLGSTLYVKLGYAGLFSLVLIVLLWMAQ 284

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
              ++      R IRDN+ A  ++   +    L  F + SA  G+AGA       +++P 
Sbjct: 285 MALKSPWGRMMRAIRDNEVAAQAMGKNVTKRHLQIFVLGSAICGIAGAMMTTLDGQLTPG 344

Query: 260 MFKFS-ENIIVISIVILGGMTSLSKIAKATAILIG-----------VVELCCGMNFYYFN 307
            +       ++  +VI+GG  +         ++             ++ L          
Sbjct: 345 TYNPLRFTFLIWVMVIVGGSGNNFGSVLGGFLIWFLWIKVEPMSLELITLLTSGLDDGSF 404

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  +        M + L LV+      L+
Sbjct: 405 LRGHLMENAAHMRLFTMGLILLLVLRFSPRGLI 437



 Score = 38.7 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 32/93 (34%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
              +  ++    L  +   + S      +    LI  + A G+++  G  GL ++  +  
Sbjct: 11  FAVVAVLILLEGLTDWSFFSGSWNSSLVILNMGLISAIMALGVNLQWGFAGLFNVGIMGF 70

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            A+G  + V+         W       +++   
Sbjct: 71  TALGGLAVVLTAMPPTPGAWSAGGPGVLMAMVM 103


>gi|291301172|ref|YP_003512450.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728]
 gi|290570392|gb|ADD43357.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728]
          Length = 339

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 40/319 (12%), Positives = 86/319 (26%), Gaps = 23/319 (7%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +   ++  + V+  +   +            ++ +   + ++ A    IV+     + L
Sbjct: 10  RREFGVVVAIGVLIAVTTVISPSFATGTDGFRNLLLTPSLLMILAVAQGIVI-ITKNIDL 68

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +      + AY+   +          ++ +  +  G     +    +        + TL 
Sbjct: 69  SVSAVLGLTAYATGRMFVDLPGLPIPVVILLGVGLGTLLGAVNGTLVSLGRVPSLVITLG 128

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
               F+ I I W       AG    +       TV  +   F    + +    ++     
Sbjct: 129 TLYAFRGIDIAWAGGDRVNAGELPREFTTMGTQTVLGVPVLFVVAVAVLAVVAYV----- 183

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
                       L +T        I  +  A       +       F  S    G+AG  
Sbjct: 184 ------------LGQTRSGRELYAIGSDDAAAVLYGLRVRRRVFFGFLASGTLAGLAGVL 231

Query: 249 FAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           FAA    +S +     E   V + V     I+GG  ++        +L  +      +  
Sbjct: 232 FAARYASVSSNAGTGMELEAVAAAVLGGVAIVGGTGTVLGAVLGAVLLTTISRALPTLGI 291

Query: 304 YYFNSLLKFDCSFNMRHTT 322
             F                
Sbjct: 292 GEFWQQAVLGALIIGAILL 310


>gi|254250054|ref|ZP_04943374.1| Inner-membrane translocator [Burkholderia cenocepacia PC184]
 gi|124876555|gb|EAY66545.1| Inner-membrane translocator [Burkholderia cenocepacia PC184]
          Length = 261

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 74/248 (29%), Gaps = 21/248 (8%)

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             + VS +++G  G  +   + +       +  LI +      L  +  I  G       
Sbjct: 28  AALIVSVIVTGLYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA------ 81

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            R   +   +             V        ++     L  ++ L++  + +  A R  
Sbjct: 82  -RDVSVPVLISGAFEIHLGGDYDVTIPYARLLIVCVTLVLMIALTLFISHSRMGRACRAC 140

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            ++ K    L           F + +    + G     +  +++P    F   I   +  
Sbjct: 141 AEDMKMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPY-IGFVAGIKAFTAA 199

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ S+        +L        G     +  ++ F               L L++L
Sbjct: 200 VLGGIGSIPGAMLGGVLLGLAETFAAGYMPAEYKDVVAFG-------------LLVLILL 246

Query: 334 MRSHSLLR 341
            R   LL 
Sbjct: 247 FRPTGLLG 254


>gi|260914464|ref|ZP_05920933.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Pasteurella dagmatis ATCC 43325]
 gi|260631565|gb|EEX49747.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Pasteurella dagmatis ATCC 43325]
          Length = 322

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 42/311 (13%), Positives = 93/311 (29%), Gaps = 23/311 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++ +      S   I ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 20  VIALLVLIAIVSMINPDFFSVDNILNILRQTSVNAIIAVGMTFVILIAG-IDLSVGSVLA 78

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +                 LL+  + ++ G     M    +        IATL+   + + 
Sbjct: 79  LTGAIAA--SMVGSELPILLVIPAVLLIGTLLGGMSGIIVAKGKVQAFIATLVTMTLLRG 136

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + +        G                      F      Y   +   +  M F+ A
Sbjct: 137 VTMVYTDGRPISTGFSDGA---------------DAFAFLGTGYIFGIPVPIWIMAFVFA 181

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L+ T I      +  N+ A       +   K+  FAVS     +AG    +    
Sbjct: 182 ASWYVLKHTRIGRYIYALGGNESATQLSGINVNKIKIFVFAVSGFLSALAGLIVTSRLSS 241

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+     +GG   +        I+  +      ++   +  ++
Sbjct: 242 AQPTAGVSYELDAIAAVVVGGTSLMGGKGRVMGTLIGALIIGFLNNALNLLDISSYYQMI 301

Query: 311 KFDCSFNMRHT 321
                  +   
Sbjct: 302 AKALVILVAVL 312


>gi|209546943|ref|YP_002278861.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209538187|gb|ACI58121.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 341

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 114/336 (33%), Gaps = 34/336 (10%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L  +  +L+ L                 + IYV+ A   + + G  GL+S+   + + 
Sbjct: 19  VALGSMAAVLILLIFAPAVLGAGAIDRMTALFIYVILAAMWNALAGFGGLVSVGQQVFFG 78

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +GAY   I  +  GL  ++ +  +A+++GA  + + L  L+ +G   AI   ++     +
Sbjct: 79  LGAYFT-IRLADAGLDPFVSLFAAAIVTGALSIPLSLFMLRLKGGEFAIGMWVV-AELAH 136

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L+    +  G+ G  +                              +Y++ L       
Sbjct: 137 LLVNLDRLIQGETGTSLISL----------------NVYDSGTRRATIYWLALASMATLL 180

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF-AASRD 254
             +  L R+    A + IRDN++A  S+   +   K   F +++  I +AG  + A +  
Sbjct: 181 GTLFMLMRSRAGAAMQAIRDNEEAATSVGVRVTATKRLLFVLAAFGIAIAGGLWLATATT 240

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                 F       +I +V++GG+           +   +                 F  
Sbjct: 241 FQPKTYFSVQWTAYMIFMVLVGGIGKFEGAILGAILFFVIET---------------FFG 285

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
           +  + +   +     +  L     L          +
Sbjct: 286 AAGVWYLIGLGATALIFSLYLPRGLWGEIERRFDFQ 321


>gi|108805394|ref|YP_645331.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
 gi|108766637|gb|ABG05519.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
          Length = 341

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/327 (11%), Positives = 86/327 (26%), Gaps = 21/327 (6%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I+ +LA++          A  S     ++ +     ++ A G++ V+ + G + L+   
Sbjct: 20  WIILILAILVAAFSVWHGRAFLSADNFLNIAVDASELLLLAVGVTFVIITAG-IDLSVGA 78

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
              + +            +   +   +               L        +  LI++++
Sbjct: 79  ILVLSSVIAAQTMVALSGTPEQVQNYTYPNQAVGIPAGIAVGLLVGTGCGLVNGLIITKL 138

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
                I          G             V   I+              +   +     
Sbjct: 139 KLTPFIATLGTLGIFLGTAQILSGGTNVPYVPPAIQS---EFGTRQLLGVLPVPIAISAV 195

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +    IL L +T        I  N +A   +   +    L  + +S    G+AG    A 
Sbjct: 196 VVVVAILMLHKTRFGRHTYAIGSNVEAARRVGIDVERHLLKVYTLSGFLAGLAGIIDVAR 255

Query: 253 RDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +  S           + + VI      GG+ ++      T I                 
Sbjct: 256 FNTASVGAHTLDNLAAISAAVIGGTSLFGGIGTIVGSVVGTFI------------PAVLR 303

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILM 334
           +               + + L L + +
Sbjct: 304 NGFVIGGVQPFWQQVAIGVVLILAVFI 330


>gi|256829004|ref|YP_003157732.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
 gi|256578180|gb|ACU89316.1| inner-membrane translocator [Desulfomicrobium baculatum DSM 4028]
          Length = 294

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 88/281 (31%), Gaps = 26/281 (9%)

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G LSL  +  Y++G Y   I+G+    + W      A+      + M           
Sbjct: 28  MAGQLSLASIGFYSLGGYIAAIMGTSPLFAAWRETLGPALYPVEWLIAM----------- 76

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           LA   L +      + ++   +            +  L   V                 I
Sbjct: 77  LASVLLGLLVGIPALRLRGIYLALATIAFVQVLNVVVLVLDVTGGAVGLFGIPQPFEKRI 136

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
              +    +  +       L RT    ++  IR+++ A  ++  +  + K+ AF +    
Sbjct: 137 GYLWFFGPLLIVMLLFSWRLTRTVAGRSFMAIREDELAAQAMGISTTYEKVRAFVIGCGL 196

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+ GA  A   +  +     F  ++  ++ V++GG  S+        +L+ + E+   +
Sbjct: 197 AGVVGAMSAPFLNTWNARQSSFDASVACLAYVLIGGARSIWGPLLGAILLVALPEVLRPL 256

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                                +  I L +  +     +  L
Sbjct: 257 KD---------------ARLIMNGIVLVVACIYLPQGIAGL 282


>gi|71083360|ref|YP_266079.1| branched chain amino acid ABC transporter [Candidatus Pelagibacter
           ubique HTCC1062]
 gi|71062473|gb|AAZ21476.1| Branched-chain amino acid transport protein [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 279

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 89/300 (29%), Gaps = 26/300 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  LIY + A GLS++ G + +++        +  +S   L S +GL     IP++ ++
Sbjct: 5   LMMGLIYALIAAGLSLIFGLMDIVNFAHGEHLMLSMFSSFWLWSLFGLDPIFSIPITILL 64

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
              CG++     +++      +  +  +      +              +   L      
Sbjct: 65  MAFCGVLTHYFLIRYILKAKMLIQICATFGLSIFIRSIAQFLWTPDFRNIDKPLLEG--- 121

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                   R   S +          L        + L++ +T    A +    ++ A   
Sbjct: 122 --------RLEISGMFIGQPQLIASLVCLVAFILLYLFVTKTETGLALQATAQDRHAAEI 173

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L           +A+    +G+AG   A             +  +     V LGG  S+ 
Sbjct: 174 LGIPSDKMFAIGWAIGLGCVGVAGGMMANYFFI--FTDVGINFALFAFVAVALGGFGSII 231

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A  I+  V  L   +                      +     LV++ R   L   
Sbjct: 232 GCLYAGIIIGLVESLGGLLID-------------PSFKLLYVFAIYLLVVIFRPQGLFGR 278


>gi|119384451|ref|YP_915507.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119374218|gb|ABL69811.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 295

 Score = 63.0 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 109/303 (35%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+++ G L +++      Y +GA++ ++L +  G++ WL + +
Sbjct: 16  LLVGLINGSFYALLSLGLAVIFGLLRVINFAHGAQYMLGAFAALLLLTVGGINYWLALLL 75

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I G    ++    L        +  L+ +      +        G +G   A     
Sbjct: 76  APVIVGVFAALVEKTMLSRLYKLDPLYGLLFTFGLALAIEGTFRYFFGASGKPYAPPAQL 135

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G               F+   I+  +V++    +  ++ L + +T +    R   +N  
Sbjct: 136 TGA----------VNLGFMFLPIYRGWVVVASLAVCIAVWLLIEKTKLGAYLRAATENPT 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +A+ +   G AG   A         +   +  IIV ++V++GGM
Sbjct: 186 LVQAFGVNVPLLLTLTYALGAGLAGFAGVLAAPVYQV--SPLMGSNLIIIVFAVVVVGGM 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L  V  L                  +      ++ + + +V+++R   
Sbjct: 244 GSILGAIVTGYMLGVVEGLTKVF--------------YPEASNIVIFVIMAIVLILRPAG 289

Query: 339 LLR 341
           L  
Sbjct: 290 LFG 292


>gi|153007415|ref|YP_001368630.1| monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC
           49188]
 gi|151559303|gb|ABS12801.1| Monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC
           49188]
          Length = 364

 Score = 63.0 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 82/303 (27%), Gaps = 18/303 (5%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
                 G   S   +  +  Q+ I  + A   ++V+ + G + L+      + +      
Sbjct: 66  FGITLGGKFFSAFALTLILQQVAITGIIAVAQTLVILTAG-IDLSVGAIMVLSSVVMGQF 124

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
             RYGL   L +         CG I G      R                 + +    + 
Sbjct: 125 TFRYGLPAELSVLFGFATGALCGFINGFLVAYVRLPPFI------------VTLGMWQVI 172

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                +Y A+                 F  S         Y ++ M  L       L  T
Sbjct: 173 LATNFLYSANETIRAQEITAEAPILQFFGESIRFGGAVFTYGVIAMVLLVLLFWYVLNHT 232

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
           A       I D+ +A      ++    +S + ++     +AG         +SP   +F+
Sbjct: 233 AWGRHVYAIGDDPEAAQLSGVSVKPILMSVYVLAGIICALAGWAMIGRLGSVSPTAGQFA 292

Query: 265 ENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
               + ++VI      GG  S+        I+                + L         
Sbjct: 293 NIESITAVVIGGISLFGGRGSILGTMFGALIVGVFSLGLRLWGTDPQWTYLLIGVLIIAA 352

Query: 320 HTT 322
              
Sbjct: 353 VAI 355


>gi|118576409|ref|YP_876152.1| ABC-type branched-chain amino acid transport system, permease
           component [Cenarchaeum symbiosum A]
 gi|118194930|gb|ABK77848.1| ABC-type branched-chain amino acid transport system, permease
           component [Cenarchaeum symbiosum A]
          Length = 299

 Score = 63.0 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 87/306 (28%), Gaps = 15/306 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
               I   I  +   GL++      + +   +    +G Y  +++    GL  +  +P+S
Sbjct: 8   LDAIIYACILAVLCTGLTLTYKITRVPNFAHMSFAILGMYVVLVVTKIAGLGPYYSLPLS 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
              SGA  +++    +K      A    IM        +    +        +   +   
Sbjct: 68  FAASGALALVLYYGVIKTLQKKGASYLTIMIATLSFDFVMIGIL-------NIIADVISE 120

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                       F          +   L  M  L   +   L RT    + R   +N+  
Sbjct: 121 YRITSREFTLRSFDGELFGAPAVLTVSLAIMAGLVVGLYYLLYRTKFGVSMRAAIENRSL 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             ++          ++ +S    G+AG   A                  V +  I+GG T
Sbjct: 181 AETVGINTNMMFGFSWFLSGGLAGLAGVLLA--LWFQGDPSLAAIMIPSVFAGSIVGGFT 238

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        ++        G+                     +  I + + +L+  + L
Sbjct: 239 SIYGAILGGVLIGVSEIFGTGLLAS------ATGAWVVAYRPVVAFIFIVVTLLVLPNGL 292

Query: 340 LRLRTP 345
             LR  
Sbjct: 293 ASLRRR 298


>gi|52082134|ref|YP_080925.1| ribose ABC transporter permease [Bacillus licheniformis ATCC 14580]
 gi|52787524|ref|YP_093353.1| RbsC [Bacillus licheniformis ATCC 14580]
 gi|319648009|ref|ZP_08002226.1| RbsC protein [Bacillus sp. BT1B_CT2]
 gi|52005345|gb|AAU25287.1| ribose ABC transporter (permease) [Bacillus licheniformis ATCC
           14580]
 gi|52350026|gb|AAU42660.1| RbsC [Bacillus licheniformis ATCC 14580]
 gi|317389644|gb|EFV70454.1| RbsC protein [Bacillus sp. BT1B_CT2]
          Length = 320

 Score = 63.0 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 103/312 (33%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  ++  +++ L   +      I ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 23  FLGLIILVVIVSLLNPSFLEPLNILNLLRQVAINALIAFGMTFVI-LTGGIDLSVGAILA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +          G+     + +  +I    G++ GL   K +      ATL    IF+ 
Sbjct: 82  LSSALIA-GMIAGGIDPVFAVIIGCLIGALLGLVNGLLITKGKMAPFI-ATLATMTIFRG 139

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +                   +Y  G  +  L   + F      Y + +    + M     
Sbjct: 140 L-----------------TMVYTDGNPITGLGNHYGFQLFGRGYFLGIPVPAITMAAAFI 182

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + + L +T        I  N+KA       +   K+  ++++     +AGA   +  + 
Sbjct: 183 ILWVILHKTPFGRRTYAIGGNEKAALISGIKVPRVKMMIYSLAGLLSALAGAILTSRLNS 242

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   ++       I+  +      +    F  ++
Sbjct: 243 AQPTAGTSYELDAIAAVVLGGTSLAGGRGRIAGTLIGVLIIGTLNNGLNLLGVSSFFQMV 302

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 303 VKGVVILIAVLL 314


>gi|312195756|ref|YP_004015817.1| inner-membrane translocator [Frankia sp. EuI1c]
 gi|311227092|gb|ADP79947.1| inner-membrane translocator [Frankia sp. EuI1c]
          Length = 745

 Score = 63.0 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/266 (12%), Positives = 83/266 (31%), Gaps = 11/266 (4%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           +  S      IY + A GL++   + G+ ++       + A++Y  L   +G    + + 
Sbjct: 7   FTISGLTTAGIYAISASGLTLTYVTTGVFNIAHGATGMLAAFAYWQLRYGWGWPTPVALV 66

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           +   ++         P      + + +  L  +     +++    +    +         
Sbjct: 67  LCVFVAA--------PLFGLLLERVVMRRLAGAPETTRLVVTVAVLVVLVSVDQWIWDPS 118

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
              ++ R L          +        VLL    ++ ++ L L R+    A R   D+ 
Sbjct: 119 EFRSS-RELFAGKGVHFGGIQVPYNDLVVLLVAAAVAGALWLLLHRSRAGIAMRARVDDP 177

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                       +   A+ + +A   +AG   A         +      +   +  ++G 
Sbjct: 178 ALATLNGARPRSSARLAWMIGTALAALAGILIAPKLTM--SAIPLTLLIVNAYAAAVIGR 235

Query: 278 MTSLSKIAKATAILIGVVELCCGMNF 303
           + SL        ++  + +   G   
Sbjct: 236 LRSLPMTFAGALVVGLLSDYAVGYVP 261



 Score = 44.9 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 48/280 (17%), Positives = 109/280 (38%), Gaps = 14/280 (5%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            +    AV++  L+              SM        +    +  +VG  G +SL  + 
Sbjct: 314 GLWFCTAVLFAALIAATTMRPADLFASTSMWGL----AIVGLSMVPLVGYAGRISLCQLS 369

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
              IG     ++           + ++A+++   G ++ LP+L+  G YLA+ T   +  
Sbjct: 370 FAGIGG---AVVAHAGHGGNPAALLLAAVVAAVVGAVVSLPALRLSGIYLALLTGAFAVT 426

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             N + +            VA   + +           R  +         ++    +  
Sbjct: 427 LDNWIFQLPAF-------TVAGHHFDVFEGGTLSADRLRLGALHTDSSKAFFFAGAVLFV 479

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           ++A +++ +RR+ +      ++++  A  +L   +    L  F VS+A  G+ G  +A++
Sbjct: 480 VAALVVIAVRRSELGQRLIAVKESPAASATLGMNVRLTTLVVFTVSAAIAGLGGGVYASA 539

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
               + D F F   + ++ +V++GG++S+     A  +L 
Sbjct: 540 VRSTTADAFSFFTGLTLLLLVVVGGVSSIGSGLAAGVLLG 579


>gi|226323376|ref|ZP_03798894.1| hypothetical protein COPCOM_01150 [Coprococcus comes ATCC 27758]
 gi|225208060|gb|EEG90414.1| hypothetical protein COPCOM_01150 [Coprococcus comes ATCC 27758]
          Length = 318

 Score = 63.0 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 102/313 (32%), Gaps = 28/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ ++  +   +        + + ++  QI +  + A G ++++   G++ L+     
Sbjct: 18  IVIIMIILFVASAVINHNFLKPQNLLNILKQISVVTIIACGETMLI-VSGMIDLSAGFLC 76

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A     + +  G      + ++ ++    G +    +      Y     +    +  
Sbjct: 77  TTSACVSAGVLASTGH-----LSLALLVGIVIGCVCEWINGFLITYYKLQPFIATLAMTY 131

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +    +  TNG                 +++    +         + +   +L M    
Sbjct: 132 VLKGIVQIYTNG-----------------QTIGGVNKARFLGHGSILGIPVPVLIMLLSV 174

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I + ++ T        I  N++A  +        K   F +S A  G+AG    A   
Sbjct: 175 IVIAVLMKSTKFGTYIYAIGGNEQATIASGINTNRTKRLIFTLSGALTGLAGVVLMARLM 234

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P + +  E   + ++++     LGG+ +++     + I+  +  +   ++      L
Sbjct: 235 AGMPSVGEGYEFDAITAVIVGGTSFLGGIGTVTGALIGSIIVGLINNILNLLHVSTQYQL 294

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 295 IVKGLLIAIAVII 307


>gi|254455579|ref|ZP_05069008.1| branched-chain amino acid transport system/permease component
           [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082581|gb|EDZ60007.1| branched-chain amino acid transport system/permease component
           [Candidatus Pelagibacter sp. HTCC7211]
          Length = 336

 Score = 63.0 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 25/328 (7%), Positives = 80/328 (24%), Gaps = 19/328 (5%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
                             + A  ++++ G L   +       + G    ++    +    
Sbjct: 9   LLLNYIFIPALTYGSQLALGAIFVTLIYGILRFANFATGDMMSFGTMITILFTWYFQSLG 68

Query: 93  W---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
                     L IP + +        +     K+     +    +       + +    +
Sbjct: 69  ISLGILPTALLAIPFAIIFMILYMFSIDKFVFKYYRTNKSPPVQLAMVSIGVMFVTQAVV 128

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
                                   +     +  +  +      +     L + +  +L +
Sbjct: 129 RIIIGPSDRRFFDGEKFIIKAREFKEMTGLNEGLALKSTQVLTIFVTIVLVSLLFWFLNK 188

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T    + +   DN+              +  + ++     + GA +   +         F
Sbjct: 189 TKTGKSMKAYSDNEDLALLSGIDPKKIVMITWIIAGILATIGGALYGLDKSF--KPFTYF 246

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK--------FDCS 315
           +  + + +  I+GG+ +         ++             +F  +L             
Sbjct: 247 NNMLPIFAAAIVGGIGNPFGAFLGGYVIAFSEIFLTYAYKKFFMYMLPESMEPESLVQLL 306

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLR 343
                  +    L +V+L R   + + +
Sbjct: 307 STDYKFAVSFSILVIVLLYRPSGIFKGK 334


>gi|121594051|ref|YP_985947.1| inner-membrane translocator [Acidovorax sp. JS42]
 gi|222111216|ref|YP_002553480.1| inner-membrane translocator [Acidovorax ebreus TPSY]
 gi|120606131|gb|ABM41871.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidovorax sp. JS42]
 gi|221730660|gb|ACM33480.1| inner-membrane translocator [Acidovorax ebreus TPSY]
          Length = 317

 Score = 63.0 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 52/320 (16%), Positives = 115/320 (35%), Gaps = 27/320 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M + GL+++   +G+L+      Y +GAY          +  W  + V
Sbjct: 10  LLNGVSYGLLLFMLSSGLTLIFSMMGVLNFAHTSFYMLGAYFAY--TLSGAIGFWPALVV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ GA G +    +L+    +  +  L+++     ++++   +  G            
Sbjct: 68  APLLVGALGAVFERYALRRVHKFGHVPELLVTFGLSYLILEVVQLVWG---------RST 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + + ++   F      +     +V+L    +  S+ L L RT I    +    +  
Sbjct: 119 VPYGLPAQLQGPLFTLYGTQFPKSRSFVMLVAVLMLLSVWLLLTRTRIGLVIQAALKHPH 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    +  F    A  G+AG         ++      S   I+  +V++GGM
Sbjct: 179 MVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NTYVTEPAMAASVGSIIFVVVVVGGM 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYF--------------NSLLKFDCSFNMRHTTLM 324
            SL+    A+ I+  V      +++                      F  + +     L 
Sbjct: 237 GSLAGAFLASLIIGLVQTFAVALDYSLVHAFARLGVQVTEQTFGYPLFKLTISQVAPILP 296

Query: 325 VIALFLVILMRSHSLLRLRT 344
            + L L+++ R   LL  R 
Sbjct: 297 YLFLVLILIFRPKGLLGTRE 316


>gi|293605106|ref|ZP_06687498.1| ABC superfamily ATP binding cassette transporter permease
           [Achromobacter piechaudii ATCC 43553]
 gi|292816509|gb|EFF75598.1| ABC superfamily ATP binding cassette transporter permease
           [Achromobacter piechaudii ATCC 43553]
          Length = 291

 Score = 63.0 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 85/303 (28%), Gaps = 27/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +  ++  + A  +++V G     +        +GAY+ V   +  G S+      +
Sbjct: 11  INGVVIGMLLALPALAITLVFGIARFPNAASGDYMTLGAYTAVFTQALAGGSMLAGGLAA 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
              + A  +       +       ++ LI S      L        G+        L   
Sbjct: 71  VAATTAVSLFFYAWVFRPLESRSNVSRLIASIGVAFALRSTITFFAGQDQYTFDLPLT-- 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                       +    V       Y++       A +   +  T      R + DN + 
Sbjct: 129 ----------RAWNFGGVRILPTDVYIVGIAVAALALVFALMHMTPTGRRMRAVADNPEL 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +         ++ ++++ A+ G+ G         I      +   + + + VILGG+ 
Sbjct: 179 AAASGIRGRRVMVTLWSIAGAYCGLGGVLLGVKAVVIPE--LGWELLMPMFAAVILGGIG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           +         +     E+   +                          L  V+L+R   +
Sbjct: 237 NPVGAIVGIMVFSIAQEVASLVVG-------------PAYKIVFAFAVLLCVLLLRPQGI 283

Query: 340 LRL 342
              
Sbjct: 284 FGR 286


>gi|239835080|ref|ZP_04683407.1| monosaccharide-transporting ATPase [Ochrobactrum intermedium LMG
           3301]
 gi|239821219|gb|EEQ92789.1| monosaccharide-transporting ATPase [Ochrobactrum intermedium LMG
           3301]
          Length = 337

 Score = 63.0 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 99/321 (30%), Gaps = 22/321 (6%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R    D  + L  ++  L+         +      + +QI I  + A G++ V+   G +
Sbjct: 22  RFLLRDAGVFLALILITLVFSFTAPYFATPGNALKIFVQIAINTVLAAGMTFVI-LTGGI 80

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+      ++ +       L IP++ +   A G + G  + K    +   + 
Sbjct: 81  DLSVGSVLALCTVVGALIMTSGLE-PALSIPLAVLACIAVGGLCGFINGKVSTYWKIPSF 139

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           ++   +        + ++N                +  + +         +I   F+  +
Sbjct: 140 IVTLGMLNIAAGAARVVSN---------------NSTITGLPQGFVDFGNLIVGGFLPSI 184

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            L    + A     LR T        +  N +A           K++AF +S    G+A 
Sbjct: 185 FLIAVAVIAVGWFVLRFTVFGRMIYAVGANDEAVRLSGHNPDAYKIAAFVISGVTAGIAA 244

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
             +    +  SP      E   + +++I      GG  S+        IL  +      +
Sbjct: 245 IVYLLRLNIGSPIAGVGYELNAIAAVIIGGTSLFGGKGSIVGTLAGACILQVLATGLQLL 304

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
                   +       +    
Sbjct: 305 GIGDNYKPIIIGTVIILAVIV 325


>gi|15616293|ref|NP_244598.1| ribose ABC transporter (permease) [Bacillus halodurans C-125]
 gi|10176355|dbj|BAB07450.1| ribose ABC transporter (permease) [Bacillus halodurans C-125]
          Length = 314

 Score = 63.0 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 92/312 (29%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +      L++        S   I ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 17  FIGLFFIVLIISFLNPDFLSLSNIMNVLRQVSINALIAFGMTFVI-LTGGIDLSVGAILA 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     L       I  ++    +++G     +    +        IATL    I++ 
Sbjct: 76  LSSAVTAWLMVNSVDPILAVLI--GLLAGTLFGAINGLVISKGKVAPFIATLATMTIYRG 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + +                   G  +        F      Y   +    + M     
Sbjct: 134 LTLVFTD-----------------GRPISGFESSTMFEMLGRGYFFGIPVPAVTMIISFI 176

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + L L++T        +  NQ+A       +   K+  ++++     +AG    +    
Sbjct: 177 ILYLILKKTTFGRRVYAVGGNQEAAILSGIKVDRIKIYVYSLTGFLSALAGMILTSRLYS 236

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 237 AQPTAGSMYELDAIAAVVLGGTSLTGGRGWIVGTLIGALIIGVLNNGLNLLGVSSFFQQV 296

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 297 VKGSVILLAVLL 308


>gi|225387383|ref|ZP_03757147.1| hypothetical protein CLOSTASPAR_01136 [Clostridium asparagiforme
           DSM 15981]
 gi|225046515|gb|EEG56761.1| hypothetical protein CLOSTASPAR_01136 [Clostridium asparagiforme
           DSM 15981]
          Length = 287

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 90/280 (32%), Gaps = 12/280 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +    Y +   G +I+ G + +++        +G Y   IL + +G+  +L +P+ 
Sbjct: 9   VNGLLMGGFYSLMGMGQNIIFGVMKIVNFCHGEMLMVGMYLTFILYTFFGIDPYLAVPMV 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           A +    G  +    +       +   L+   +   +L+    +    +           
Sbjct: 69  AAVMFVLGAGIQHTLITPSLGTKSFTNLLFLTVGLGLLLSNGALVIFGSEYRSI------ 122

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
               R+       P   V   +        +  ++ ++  +L+ T +    R +  N   
Sbjct: 123 ----RTAYSQTYIPMGPVTISLPRMISFGVLIVVTIALFAFLKYTTVGKQIRAVSQNPVG 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +    L  + +  A  G AGA               F      + +V++GG+ 
Sbjct: 179 AEVVGIDVKKIYLLTYGLGVALAGTAGALLTQFYTIFPTAGASFG--FRALIVVVVGGLG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           S+     A   L  +  +        ++ L+ F     + 
Sbjct: 237 SIPGAFLAGIFLGLLETMSALFISPSYSDLIVFMTFIVIL 276


>gi|209515221|ref|ZP_03264089.1| Monosaccharide-transporting ATPase [Burkholderia sp. H160]
 gi|209504475|gb|EEA04463.1| Monosaccharide-transporting ATPase [Burkholderia sp. H160]
          Length = 351

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 94/310 (30%), Gaps = 23/310 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++ ++      +      + + +  + + + I  +   G+++V+  +  + L+     
Sbjct: 38  LFVVLILLIAGTGIARPQFLNLQNLRDVLLNVSIIGLLTAGMTVVI-LMRHIDLSVGSTV 96

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I AY+   L   +     L+   + +  G     +    +        +ATL    IF+
Sbjct: 97  GISAYAVGSLYVAFPHMPVLVALAAGLAIGLVAGGINALLVAVGRVPSLVATLSTLYIFR 156

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                W                        SL   +   ++  +  I    ++  +    
Sbjct: 157 GADYAWVH---------------GGQINATSLPDAYSRLATGTLLGIPTLALIAIVVLAG 201

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            S+ L   R         I  N +A       +    +S F +S A  G AGA + A   
Sbjct: 202 LSVYLKQFRG--GREHYAIGSNPEAARLAGVNVERRVMSGFLLSGAIAGFAGALWLARFG 259

Query: 255 RISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +          +     +V S+ I GG+ ++        +L  +      ++   F   
Sbjct: 260 TVDASTAKGIELQVVAAAVVGSVAITGGVGTILGATLGALVLGVISIALVVLHVSPFWEQ 319

Query: 310 LKFDCSFNMR 319
                     
Sbjct: 320 AIQGALIVAA 329


>gi|28869611|ref|NP_792230.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|28852853|gb|AAO55925.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|331018977|gb|EGH99033.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 380

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 82/332 (24%), Gaps = 40/332 (12%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------------ 84
            +   +  + L     A G+ ++ G  G+LSL   I + +G+Y   +             
Sbjct: 52  DFRLGLAGKYLSLAFCAVGMVMIWGYGGILSLGQGIFFGLGSYMMAMYLKLEATATDEAA 111

Query: 85  ----GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                         +I  S              +       +  A L     +     + 
Sbjct: 112 SALAAFYGSALPDFMIWNSVEALPWWWKPFESATFTLAAILILPALLAFLFSYAYFKKRV 171

Query: 141 KPITNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             +                I            +      F            +Y +   +
Sbjct: 172 GGVYFSIITLSLASIMSIMIIGQQGYTGGVNGLTDFKTVFGLSLQTQQTPWILYLITTLL 231

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              S ++  ++ R+ +      IRD +             K   FAV++    + G  F 
Sbjct: 232 LLASVAMCGFILRSRLGKVIVAIRDREDRVRFSGYNTALFKAFIFAVAALISALGGVMFT 291

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                 SP +     +  ++    LGG  SL      T ++                   
Sbjct: 292 LQVGLASPSLVGIIPSTEIVIYAALGGRLSLVGAVYGTLLIGAAKTYLSE---------- 341

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +F       +      V+L     L  L
Sbjct: 342 ----NFVSFWQYFIGFLFMGVVLFLPTGLAGL 369


>gi|91976805|ref|YP_569464.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91683261|gb|ABE39563.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 291

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 91/265 (34%), Gaps = 12/265 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+++ G L +++      Y +GA+    L + +G+  W  + +
Sbjct: 12  LLVGLINGSFYALLSLGLAVIFGMLNIINFAHGALYMMGAFCAYFLLNLFGIGYWWALIL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +  G  GM+M    L++      +  L+++     I+        G +G+  A     
Sbjct: 72  APLTVGLFGMLMERTLLQWLSGLDHLYGLLLTFGVALIIQGVFQNYFGSSGLPYAIP--- 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                            F+   I+  +V+     +   I   + RT +    R   +N  
Sbjct: 129 -------DELKGGVNLGFMFLPIYRGWVVAFSLVICLLIWYLIERTRLGANLRAATENPT 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       + +      +AG   A         +      I+V ++V++GGM
Sbjct: 182 LVRAFGINVPRMITLTYGLGVGLAALAGVLSAPINQV--RPLMGADLIIVVFAVVVIGGM 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNF 303
            S+         L  +  L      
Sbjct: 240 GSIMGSIITGFALGVIEGLTKYFYP 264


>gi|238797891|ref|ZP_04641383.1| Ribose transport system permease protein rbsC [Yersinia mollaretii
           ATCC 43969]
 gi|238718307|gb|EEQ10131.1| Ribose transport system permease protein rbsC [Yersinia mollaretii
           ATCC 43969]
          Length = 322

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 88/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAVVSSLSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +   G+   + +                + F  
Sbjct: 82  LTGAVAASIVGLEVNAMVAVAAALALGAFIGGITGVIVAK------------GKVQAFIA 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T V     +F     F I        ++       
Sbjct: 130 TLVMMLLLRGVTMVYTNGSPVNTGFTEVADTFGWFGIGRPFGIPTPIWLMAIVF-----I 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 185 AAWYMLHHTRLGRYIYALGGNESATRLSGISVDKVKIIVYSLCGLLAALAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|327400708|ref|YP_004341547.1| ABC transporter integral membrane subunit [Archaeoglobus veneficus
           SNP6]
 gi|327316216|gb|AEA46832.1| ABC-type transporter, integral membrane subunit [Archaeoglobus
           veneficus SNP6]
          Length = 307

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 95/294 (32%), Gaps = 14/294 (4%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           + V+ A GL++   +  + +         G+Y  + L    G+  +  +P++ ++ G  G
Sbjct: 13  LLVLLAIGLTLTYITTAVPNFAQGSFAIFGSYIALTLLRLSGIHPYTALPIAFILGGMLG 72

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +   +  L+      +    +M       LI    I      +    R   +        
Sbjct: 73  LATYILVLRPLIKKDSTIVTLMIATLAWDLILLGIIGAYSEFLGKITRKAGVKFIFT--- 129

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                               + +    A + L L +T    A R   +N      +   +
Sbjct: 130 ---YLDYEIAGISAIFLVSTVVIAVTLAGLFLLLYKTKFGIALRASMENPSLAEIMGVNV 186

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
            + ++ ++ +S A   MAG      ++ +          + + +  I+GG++S+      
Sbjct: 187 EYTRMFSWFLSGALAAMAGCLLPFKQEIVPAT--GALIIVSIFAASIVGGLSSIYGALLG 244

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             I+     L        +   +       +    + ++ L + +L+    ++ 
Sbjct: 245 GYIIGLSESLIT------YELSVVLGTGVLVYSKVVSLVILIITLLVAPRGIVG 292


>gi|269795362|ref|YP_003314817.1| branched-chain amino acid ABC transporter permease [Sanguibacter
           keddieii DSM 10542]
 gi|269097547|gb|ACZ21983.1| branched-chain amino acid ABC-type transport system, permease
           component [Sanguibacter keddieii DSM 10542]
          Length = 348

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/347 (10%), Positives = 93/347 (26%), Gaps = 32/347 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSM--GIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
           L    VV   L+   + A     +  ++       +Y + A G ++V G L L++     
Sbjct: 8   LIHAMVVAEPLIGFDVAALGRNFWALTIDGLTYGSVYALVAVGYTLVYGVLRLINFAHSE 67

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP-----------------SL 115
            + +G +         G           ++     +   +                    
Sbjct: 68  VFMLGMFGQYAALMLLGFGPNGDAYNMGILMTVLYLGAAMIGGMAISGGVAVGLERVAYR 127

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
             R         +++ I  + +++                       +R +    +F   
Sbjct: 128 PLRKRGAPSLVFLITAIGASFVLQEFVHFVLPRLTGGTLGGVNAQRPIRLVEPEVQFQIG 187

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                     +++    L+ +   ++ RT      R +  +      +  +     +  F
Sbjct: 188 SANVTNVTIIIVVSALLLALATDQFINRTKFGRGIRAVAQDPVTATLMGVSRERIIMLTF 247

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            +     G A   +             F   I      +LGG+ +L        +L  + 
Sbjct: 248 LIGGILAGAAALLYTLRVPNGIVYSGGFILGIKAFCAAVLGGIGNLRGALLGGLLLGVME 307

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                +    +  ++ F               L LV+++R   +L  
Sbjct: 308 NYGQVVFGTEWRDVVAF-------------ALLILVLMVRPTGILGE 341


>gi|227485849|ref|ZP_03916165.1| ribose ABC superfamily ATP binding cassette transporter
           [Anaerococcus lactolyticus ATCC 51172]
 gi|227236227|gb|EEI86242.1| ribose ABC superfamily ATP binding cassette transporter
           [Anaerococcus lactolyticus ATCC 51172]
          Length = 320

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 100/294 (34%), Gaps = 24/294 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    V++ + + +      S +   ++ +   +  + A G+++++   G + L+     
Sbjct: 16  IIAFLVIFFIAVLVKGTTFLSLRNFTNILLNNAVIGIIALGMTMII-ITGGIDLSVGSQL 74

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      I       SI L I  S ++    G++ G+    F+     +   + +    
Sbjct: 75  AMSG-LIGITVLNTTDSILLSILASLVVGILSGLLSGVLISNFKIPAFIVT--LGTTSIY 131

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L ++     G         +   GT V   +         +I  + +Y+++L +    
Sbjct: 132 RSLSQYFYHGGG---------ILAKGTKVDQFLAISNTKILGIIPTLVLYWLILSLTIGF 182

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 +++T           N++A            +  + ++   + +A    A+   
Sbjct: 183 I-----MKKTNFGRYIYGSGSNEQAANLSGVNTKKTVMLTYVLAGFLVALASLMEASRLG 237

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMN 302
            ++      S ++  I+ V++GG        ++      T  L  +  +   + 
Sbjct: 238 SMNSASSGLSYDMDSIAAVVIGGTRMSGGYGTIIGTVFGTLTLGIINNMLNLLG 291


>gi|167772635|ref|ZP_02444688.1| hypothetical protein ANACOL_04016 [Anaerotruncus colihominis DSM
           17241]
 gi|167665113|gb|EDS09243.1| hypothetical protein ANACOL_04016 [Anaerotruncus colihominis DSM
           17241]
          Length = 859

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 50/318 (15%), Positives = 98/318 (30%), Gaps = 24/318 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +Y  I  ++AV++ L  F+  G   S   + ++  Q     + A  +++++   G + L+
Sbjct: 20  RYMTIAAMIAVLFVLFSFVSKG-FLSFNTVMNLFRQAASNALAAIAMTMIM-LTGGIDLS 77

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A    +  +     G S  L   V   ++ A     GL    +   YL IA  I+
Sbjct: 78  VGSVVAFSGAAGALAMQAAGGSTLLAGIVGITVTVAAAAGFGL-INGYAAGYLKIAPFIV 136

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +    ++           + + V + LY   +      +            I        
Sbjct: 137 TLATMSLARGLTLTVTHSSRVIVDNSLYNFVSQTDLFGKIPVSLLLVAAAYIAA------ 190

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
                    L L RTA       I DN  A  +    +    L  + V+  FI ++    
Sbjct: 191 --------YLLLTRTAFGRRTYAIGDNPVASRASGINVEKHTLCVYIVAGVFIALSTIVI 242

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNF 303
                     M        VI+ V++GG        +L        +   +      ++ 
Sbjct: 243 VGRARSAQ-PMAGVGMEFDVITAVVIGGTSLMGGQGNLKGTLLGVLLTSVIFTGLSMLDL 301

Query: 304 YYFNSLLKFDCSFNMRHT 321
             F + +       +   
Sbjct: 302 SPFVNYMVQGSLILLAVL 319


>gi|170741427|ref|YP_001770082.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168195701|gb|ACA17648.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 295

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 103/304 (33%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+I+ G L +++      Y +GA+   +L +  G+  W  + +
Sbjct: 16  LLLGLINGSFYAILSLGLAIIFGLLNIINFTHGAQYMMGAFVAWMLLNYAGIGYWWALLL 75

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +  G  G+I+    +        +  L+++     I+        G +G+  A     
Sbjct: 76  APLAVGLFGVILERLLIARLYKLDHLYGLLLTFGLALIIQGLFRNEYGVSGLPYAIPQEL 135

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G               F+    +  +V++    +  +  L + +T +    R   +N  
Sbjct: 136 SG----------GQRLPFMFLPNYRGWVVVASLVVCIATWLVIEKTKLGAYLRAATENPT 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +    A    AG   A                I+V ++V++GGM
Sbjct: 186 LVQAFGVNVPLLLTLTYGFGVALAAFAGVLAAPVYSV--NPNMGADIIIVVFAVVVIGGM 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L  V  L                  +    +T++ + + LV+L++   
Sbjct: 244 GSILGSIVTGFALGLVEGLTKVF--------------YPEASSTVIFVIMVLVLLVKPAG 289

Query: 339 LLRL 342
           L   
Sbjct: 290 LFGR 293


>gi|325294189|ref|YP_004280053.1| ribose ABC transporter transmembrane protein [Agrobacterium sp.
           H13-3]
 gi|325062042|gb|ADY65733.1| ribose ABC transporter, membrane spanning protein [Agrobacterium
           sp. H13-3]
          Length = 340

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 103/309 (33%), Gaps = 10/309 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            VV  ++      A  S     ++ +Q+    +   G + V+   G + L+     A+  
Sbjct: 30  LVVLVMVFSATSSAFFSVNNAMTIALQVTSIALLGIGATCVI-ITGGIDLSVGSVLALAG 88

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               +     G+ + + + +  +    CG+I GL   +F+      ATL M  I + + +
Sbjct: 89  VVAALAVKELGMPVPVGMLLGILTGSLCGLINGLMVTRFKLPPFI-ATLGMMLIARGVAL 147

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +   IT  +A   + +    LG      I          +    + Y ++ M  ++ ++ 
Sbjct: 148 Q---ITGARAVSGLGESFGELGNGALFRIVNIGDDGFPNVVFPGIPYPVILMVVIALAVS 204

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L R+ +      +  N  A       +       + +S    G+ G    +      P
Sbjct: 205 FMLNRSILGRHIYAVGSNADAARLSGVNVARVTNFTYILSGTLAGLTGCVLMSRLVTAQP 264

Query: 259 DMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           +     E   + S VI     +GG+ ++S  A    ++  +           F   +   
Sbjct: 265 NEGVMYELDAIASAVIGGTSLIGGVGTISGTAIGAFVIGILRNGLNMNGVSAFTQQIIIG 324

Query: 314 CSFNMRHTT 322
               +    
Sbjct: 325 LVILVTVWI 333


>gi|299533433|ref|ZP_07046815.1| UrtA [Comamonas testosteroni S44]
 gi|298718639|gb|EFI59614.1| UrtA [Comamonas testosteroni S44]
          Length = 289

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 47/291 (16%), Positives = 97/291 (33%), Gaps = 25/291 (8%)

Query: 53  AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112
           A GL+++ G +G+++L     Y IGAY    L    G    +++ V  +++   G  +  
Sbjct: 24  ASGLTLIFGIMGVINLAHGSFYMIGAYVAFSLAPYLGQHFIIMLLVGVVLAVVLGYFLEW 83

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
               F  +   +  ++M+     +    + I  G             G    + +     
Sbjct: 84  AFFSFLYERDHLQQVLMTYGLILVFEGLRAILVGND---------VHGVEKPAWLAGSFP 134

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
               + Y  +  +       ++  +   + RT +    R    N+     L   I     
Sbjct: 135 LMGMMQYPWYNVFAAAACLLVALLMYYTVNRTRLGMMIRAGASNRDMVRGLGINIKRLYR 194

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             FAV  A   +AG   A             S  II   +V++GG+ S++    A+ ++ 
Sbjct: 195 IVFAVGVALAALAGMIAAPMSSV--YPNMGSSVLIICFVVVVIGGIGSITGALIASLLVG 252

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            V                     F       + + + ++++ R   L+  R
Sbjct: 253 FVDTFGKVF--------------FQELSGMSIYLLMAVILVWRPEGLMGKR 289


>gi|163746373|ref|ZP_02153731.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Oceanibulbus indolifex HEL-45]
 gi|161380258|gb|EDQ04669.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Oceanibulbus indolifex HEL-45]
          Length = 434

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 97/274 (35%), Gaps = 21/274 (7%)

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + +  PV  + +     ++G  +L  R DYLAIATL ++EI   +L     ++ G   +
Sbjct: 161 PVLISWPVGGLFAAGAAWLIGKTALGLRSDYLAIATLGIAEIIIAVLKNEDWMSRGVKNV 220

Query: 151 YVADRLYFLGTTVRSLIRF---------FRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               R       +++   F             +S +  ++    +   +  +   +    
Sbjct: 221 IGLPRPVPYEIDLQNDPSFVERAAGFGFDPVDASTLWVKLLYIALFAVVLIVLLWMSQRA 280

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +      R IRDN+ A  ++   +    L  F + SA  G+AGA       +++P  +
Sbjct: 281 LHSPWGRMLRAIRDNEVAAEAMGKDVTARHLQVFILGSAICGIAGAMMTTMDSQLTPGTY 340

Query: 262 KFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR- 319
           +      ++  +VI+GG  +         ++  +      M  +  + +       +   
Sbjct: 341 QPLRFTFLIWVMVIVGGSGNNFGAILGGFLIWFLWVQVEPMGLWLMSLITSGMAEGSALK 400

Query: 320 ----------HTTLMVIALFLVILMRSHSLLRLR 343
                         M + L LV+      L+  R
Sbjct: 401 AHLIESAAHMRLLTMGMVLLLVLRFSPRGLIPER 434



 Score = 36.0 bits (81), Expect = 8.2,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 39/104 (37%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +      L+ ++ G  +S      +    LI  + A G+++  G  GL ++  +   A+G
Sbjct: 9   ILFGIIALMIIYTGFEQSWNSALLIIAMGLISSIMALGVNLQWGFAGLFNVGIMGFVALG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             + V++        W     + + + A G    + ++      
Sbjct: 69  GLAAVLVSMPPTEGAWSTGGFAILGALALGAGTVVAAVMLMKRM 112


>gi|312197073|ref|YP_004017134.1| ABC transporter permease [Frankia sp. EuI1c]
 gi|311228409|gb|ADP81264.1| inner-membrane translocator [Frankia sp. EuI1c]
          Length = 317

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 40/325 (12%), Positives = 100/325 (30%), Gaps = 15/325 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V  P +             + S      IY + A  L +   + G ++        +G 
Sbjct: 3   LVAMPGINDALFHPAYFFGLVTSGLTVGSIYALMAISLVVTFRASGHINFAQGEMGTLGT 62

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           +    L  ++GL  WL +P+  ++S   G  +    ++          ++ +     I  
Sbjct: 63  FVVFTLCVQHGLPYWLAVPLVILLSILFGAGVDRGLIRPVERRGPQGAMLATLGLYLIFN 122

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               I  G   +               L+                 Y+ + +  ++ +++
Sbjct: 123 AVTAIIWGVDQVAPITPFPSKVHDQWVLLDGPPQF----ALRYSTLYIWVTVAVVTTALV 178

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           L ++RT +  ++R    N  +   +   +   +   + +++A   +A   F+A    +  
Sbjct: 179 LLMQRTRLGLSYRAAATNPDSASLVGIPVGLMRTFGWGLAAAVGSIAAILFSAQGGALDF 238

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           ++         ++    GG  S+        ++  V  L   +  +    L        +
Sbjct: 239 NLMSGVLLFG-LATAAFGGFDSIGGAVIGGLVVGLVEMLLPALFTFIGGQLSTVTALLVI 297

Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343
               L+          R + L   +
Sbjct: 298 VVVLLI----------RPYGLFGNK 312


>gi|254362594|ref|ZP_04978690.1| D-ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Mannheimia haemolytica PHL213]
 gi|153094201|gb|EDN75086.1| D-ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Mannheimia haemolytica PHL213]
          Length = 322

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 86/311 (27%), Gaps = 23/311 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  + + +      S   I ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 20  FVALFILIVSVSMINPDFFSVDNILNILRQTSVNAIIAVGMTFVILIAG-IDLSVGSVLA 78

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L       + ++  V  + +   G+   + +                + F  
Sbjct: 79  LTGAVAATLVGSELPILLVIPLVLLLGTAFGGISGAIVAK------------GKVQAFIA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +          F      Y   +   +  M  +  
Sbjct: 127 TLVTMTLLRGITMVYTDGRPISTGFSDQADA-----FAFIGTGYLFGIPVPIWIMAVVFG 181

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L+ T I      +  N+ A       +   K+  FAVS     +AG    +    
Sbjct: 182 LAWYILKHTPIGRYIYALGGNESATQLSGINVNKIKIFVFAVSGFLSALAGLIVTSRLSS 241

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+     +GG   +        I+  +      ++   +  ++
Sbjct: 242 AQPTAGVSYELDAIAAVVVGGTSLMGGKGRVMGTLVGALIIGFLNNALNLLDISSYYQMI 301

Query: 311 KFDCSFNMRHT 321
                      
Sbjct: 302 AKALVILAAVL 312


>gi|157962104|ref|YP_001502138.1| monosaccharide-transporting ATPase [Shewanella pealeana ATCC
           700345]
 gi|157847104|gb|ABV87603.1| Monosaccharide-transporting ATPase [Shewanella pealeana ATCC
           700345]
          Length = 345

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 47/338 (13%), Positives = 107/338 (31%), Gaps = 29/338 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFL---------GATKSQKYIDSMGIQILIYVMFAWGLSI 58
           L+KY  +L  L +   + +   +             +Q  + S+  Q+ I  + A G++ 
Sbjct: 22  LHKYGIVLAFLFICATIAVLGEICIHNGMWDSNYFLTQGNLLSVLRQVSINGILAVGMTF 81

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           V+   G + L+     A+         +     +        ++     + +G       
Sbjct: 82  VIIVAG-VDLSVGSVLALAGIVSARFVTNSSNMLIGGFDSPILLPLMVAICIGAICGFLN 140

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           G  ++   L            +       +       L   G  V SL R FR   +   
Sbjct: 141 GYIISKFRLQA----------FIVTMGMLSVARGMTMLTTDGNPVSSLDRGFRALGNSYT 190

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
           + I    V+  + F++A  +L   +T        +  N+K+  +    +   K++ + + 
Sbjct: 191 FGIPTPVVIFAVIFVAAWFLLN--KTVFGRYVFAVGGNEKSAQTSGIDVHKVKVAVYTLC 248

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
                +AG    A           F   +  I+ V++GG +       A  +      L 
Sbjct: 249 GVMAAIAGLILTARTGSAQ-TSAGFGYELDAIAAVVIGGTS------MAGGLGTLTGTLF 301

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
             +     N+ L      +     +  + +   +++  
Sbjct: 302 GVLIIGVMNNGLDLLGVQSYYQQIIKGLLIVAAVMLDP 339


>gi|331703029|ref|YP_004399716.1| ribose/galactose ABC transporter permease I [Mycoplasma mycoides
           subsp. capri LC str. 95010]
 gi|328801584|emb|CBW53737.1| Ribose/Galactose ABC transporter, permease component I [Mycoplasma
           mycoides subsp. capri LC str. 95010]
          Length = 855

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/339 (10%), Positives = 85/339 (25%), Gaps = 27/339 (7%)

Query: 13  KILCLLAVVYPLLLFLFLGAT----------KSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
            I+    V    L FL +               + +       + +Y++    ++I    
Sbjct: 35  SIIVGFIVSGIFLSFLNINPFTYFALLFGINFDKNFYQISLNWMAVYIVAGLSMAIAFK- 93

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G+ ++              I+           I    +I      I+    + F    L
Sbjct: 94  AGVFNIGASGQILTATSVATIVFFSISGKDASSISPFMIILMLITCIVSAAFIAFIAGIL 153

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
             A   + E+   IL+ W      K             +     I   +         I 
Sbjct: 154 -KALFNIHEVVSTILLNWSVFYIFKWFFGRYQDFSSGLSYTSKNIPSDQLSIGSNTVIIP 212

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +   L+ +  +         +T +    + +  +      +   +    +++  +S A  
Sbjct: 213 LLIALICVVIIWILF----SKTVLGFKLKAVGSSITGSKYIGINVKRQIITSLTLSGAVA 268

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA---KATAILIGVVELCC 299
           G+AG     +    +         +   +I +     SL            +  +  +  
Sbjct: 269 GIAGFLSMFTVSPNNFFASNSLPTLGFDAIAV-----SLV-AFNNPIGIIAIGWLWAIIK 322

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALF--LVILMRS 336
                  +          +    L+       + I  + 
Sbjct: 323 TGGGPISSLYSISTQISGLISGILIYFTAIVSVFIAFKP 361


>gi|319780406|ref|YP_004139882.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166294|gb|ADV09832.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 295

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 105/304 (34%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y M + GL+++ G L +++      Y  GA+   +L +  G+  W  + +
Sbjct: 16  LLVGLINGSFYAMLSLGLAVIFGLLRVINFAHGAQYMFGAFVGYLLLTHLGIGYWPALIL 75

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +I G  G+++   +L    D   +  L+ +     +L        G +G   A     
Sbjct: 76  VPLIVGVFGVVVERLALSRLYDLDPLYGLLFTFGLALVLEGIFRYYYGVSGNPYAVPP-- 133

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +        F+    +  +V++    +       + +T + +  R   +N +
Sbjct: 134 --------LLAGGTNLGFMFLPNYRGWVVVASLIVCFGTWALIEKTRLGSYLRAATENPR 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       + + SA  G+AG   A         +      I+V ++V++GGM
Sbjct: 186 LVQAFGVNVPLLLTLTYGLGSALAGLAGILAAPIYQV--SPLMGSDLIIVVFAVVVVGGM 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L     L                  +      ++ + + +V+L+R   
Sbjct: 244 GSILGAIITGYMLGLAEGLTKVF--------------YPEASNLVVFVIMAIVLLVRPAG 289

Query: 339 LLRL 342
           L   
Sbjct: 290 LFGR 293


>gi|148243966|ref|YP_001220205.1| inner-membrane translocator [Acidiphilium cryptum JF-5]
 gi|146400529|gb|ABQ29063.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidiphilium cryptum JF-5]
          Length = 289

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 102/301 (33%), Gaps = 28/301 (9%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +  +  + Y + A GLS+++G  G+++       A+G Y          +  W  + V+ 
Sbjct: 11  NGLVVGIFYALMALGLSLILGLNGIINFAHGTFMALGGYLA--FTLEPYIGFWGGLLVAP 68

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +++   G++     ++       + +L+++     I+        G  G   A   Y   
Sbjct: 69  LLAVVVGVVTERVLIRPLYGRDPLFSLLLTFGLAMIMQDMIRTIWGSIGQPFALPNYLNS 128

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
               S+               F   V+L    ++ ++   LR + I    R    + +  
Sbjct: 129 PLSSSMFFLTG----------FRIVVILITVLVTGALFAVLRFSRIGIRIRAGNADLETI 178

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            SL   I F +   F +     G+AG   A             S  +     +I+GG+ S
Sbjct: 179 SSLGVNIFFLRAVNFGIGIFLAGVAGILAAGQLGL--SPTIGDSLIMPAFVAIIVGGVGS 236

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L        I+     L                  + +    ++ + + +V+++R   LL
Sbjct: 237 LMGSVLGGLIIGIASGLTAAF--------------YPVAQEVVIYVIMAVVLVIRPRGLL 282

Query: 341 R 341
            
Sbjct: 283 G 283


>gi|312199351|ref|YP_004019412.1| inner-membrane translocator [Frankia sp. EuI1c]
 gi|311230687|gb|ADP83542.1| inner-membrane translocator [Frankia sp. EuI1c]
          Length = 682

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 47/302 (15%), Positives = 113/302 (37%), Gaps = 19/302 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             ++  +++ L         Y   +    L + +     ++  G  G+L L+ +I    G
Sbjct: 328 FGLIPFVIVALLPLFFSGSPYWLGLTASGLTFAITFLTFTVSTGEGGMLWLSQIIFAGAG 387

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A         + + + L I ++A+++   G I+GL +++    Y+ + TL    + + ++
Sbjct: 388 ALGAAQFVQAWHVPVLLAIFLAAVVAAIVGAIIGLLTIRLGDLYVGLTTLTFGLLVETLV 447

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                  +G  G+ +                      S+ + ++   Y+ L +  + A +
Sbjct: 448 FTRDRFAHGGIGLTLTRP-------------------SWAVDDLPFAYLSLAVFVILALL 488

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           IL LRR+    A R +RD+  A  +L  +++  K+   A+++    + G           
Sbjct: 489 ILNLRRSTSGLALRGVRDSTPAARTLGLSVVQVKVVVGAIAAFVAAIGGGMQGLYTMSAQ 548

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  +     ++ ++I +  G+ S++  A A  +      L        +  +        
Sbjct: 549 PSSYATFAGLVWLAIAVTMGVRSITAAAVAGILFTLSGGLVTSYLPARWGEIPAILFGLG 608

Query: 318 MR 319
             
Sbjct: 609 AI 610



 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 92/295 (31%), Gaps = 11/295 (3%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA-YAIGAYSYVILGSRYGLSIWLL 95
           +YI +      IY + +  L +   S G+ +       + +  + Y +    +  +    
Sbjct: 3   QYIVAGLALGSIYAIASSALVVTFVSAGVFNFAFGSIAFFVARFYYWLNSEHHMGTWTAG 62

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +    +++ A G  +     +       +  L+ +      L     +  G   I  A  
Sbjct: 63  VLSILVLAPALGAFLYGALFRHLRGKTTLVKLVATIGLSVALPPVANLIFGSQAITAAPG 122

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           L  L      ++         + Y   ++ VL G           LR T +    R + D
Sbjct: 123 LAALTDKPYHVLGTAVTTDQVITYGFLIFVVLAGTAV--------LRFTDVGLRVRAMVD 174

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++       T      L  + +S+A  G+AG   A +           +     I+ ++ 
Sbjct: 175 SEAMASLSGTNPGRVSLGVWTISTALAGLAGILVAPTNGL--SPSGMTALLSASIAAMVA 232

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
             + SL     A+ ++  V ++                 S      T+ ++   L
Sbjct: 233 ARLRSLPGAVLASLVMGVVTDVIQKYLPTNSTLSAAIVPSIPFAFLTVFLLFYVL 287


>gi|297199473|ref|ZP_06916870.1| urea ABC transporter, permease UrtC [Streptomyces sviceus ATCC
           29083]
 gi|197712984|gb|EDY57018.1| urea ABC transporter, permease UrtC [Streptomyces sviceus ATCC
           29083]
          Length = 375

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 103/342 (30%), Gaps = 31/342 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
                  +L L +       +  S+  + L Y + A G+S+  G  GL+ L   + + +G
Sbjct: 28  AGFALGAVLLLGIAPLALSDFRLSLLAKYLCYAIVAVGVSLAWGRGGLMVLGQGVFFGLG 87

Query: 78  AYSYVIL-------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
            Y+  +         +   L  ++ +  +             P        L    +   
Sbjct: 88  GYAMAMHLKLTDAAATGEKLPDFMQLYGTGDALPWWWKPFANPGFALAMTVLLPMAVAAV 147

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFL----------GTTVRSLIRFFRFPSSFVIYE 180
             F     + K          +A  L                +  +  FF +     + +
Sbjct: 148 LGFLVFRRRVKGAYFAILSQALAAALSIWLVGQQATTGGTNGLTDIQGFFGYSLDDPVNQ 207

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             +Y+V+  +  L  ++   L  +        +RD+++    L       KL A+ V++ 
Sbjct: 208 RMVYFVIAVVLLLLMALARQLFVSRYGELLIAVRDSEERVRFLGYNPANIKLVAYVVAAG 267

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             G+AGA F  +   ISP +     +I  +    +GG  SL         +         
Sbjct: 268 MAGLAGALFVPAVGIISPALIGIVPSIGFVIGAAVGGRASLVGAVLGAIAVAWAQSTLSD 327

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                          F    T L  +   L +      L  L
Sbjct: 328 --------------EFPAAWTYLQGLLFVLAVGFLPGGLASL 355


>gi|167770568|ref|ZP_02442621.1| hypothetical protein ANACOL_01914 [Anaerotruncus colihominis DSM
           17241]
 gi|167667163|gb|EDS11293.1| hypothetical protein ANACOL_01914 [Anaerotruncus colihominis DSM
           17241]
          Length = 295

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 91/298 (30%), Gaps = 22/298 (7%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            +Y M A  +S++  SL ++       + +GA+   +L +R    I  ++  S   +   
Sbjct: 16  ALYGMLALSVSLIYASLDIIHFAQGEIFTLGAFLGWVLFTRGVPMIPTILLASFATALV- 74

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
                   +  +  Y  I  +      + +                   ++   +     
Sbjct: 75  ------AIIIQKCIYNPILNMGGGFSIRGLTFVVAGFGMSAILQNAYWLIWGAVSKSYDA 128

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                     V  +     V++    + A + L  ++T I  A + +  N+     +   
Sbjct: 129 NFGDPVQLGSVSVQPVYLVVIVVALIVMALLHLMFKKTKIGLAMKAVSYNKPISALMGVN 188

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
             F    AF +++    ++G   A                    S  ++GG+ ++     
Sbjct: 189 TRFIVSFAFGLAAFLSSVSGILSAQIIFVRYNMSATMLL--KAFSAAVIGGLGNVYGAML 246

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
              I+  V           +  ++ F             + + L++++R   L   +T
Sbjct: 247 GGLIVGVVETFGSHFIGSAYKDVISF-------------VIMILMLMLRPGGLFSTKT 291


>gi|91786887|ref|YP_547839.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91696112|gb|ABE42941.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas sp. JS666]
          Length = 305

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 91/306 (29%), Gaps = 16/306 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + A GL++V G +  ++L     Y +GAY         G     ++  
Sbjct: 10  LLNGLQYGVLLFLLAAGLTLVFGIMSFVNLAHGSLYMMGAYFAATAFQYTGSFGLAVLAA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                     +  +   +          L    +        + I   +           
Sbjct: 70  MLGSLLLGLALEFVAVARLYRRDHLDHVLATFGLVLFFNELVRIIWGAQPVFLQVPEFLG 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                               Y  + + +++    ++    L + +T +    R    N  
Sbjct: 130 GA-----------IDIGGFSYPAYRFAIIVVGLVVAIGSWLLINKTRVGMLIRAGAVNPA 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FAV +   G+AGA         S         I  + ++++GG+
Sbjct: 179 MVAALGVNIRLLNAMLFAVGAMLAGLAGAMAGPILSVQSGMGESVL--ITTLVVIVIGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC---SFNMRHTTLMVIALFLVILMR 335
            S++    A  I+  V  +      +    + +      +     + L+ + + +V+  R
Sbjct: 237 GSVTGAFYAALIVGIVDTMGRVFLPFLLRQVTERSFADAAGPALASMLVYLLMAVVLAWR 296

Query: 336 SHSLLR 341
              L  
Sbjct: 297 PQGLFP 302


>gi|332998025|gb|EGK17630.1| ribose transport system permease protein rbsC [Shigella flexneri
           K-272]
 gi|333013725|gb|EGK33090.1| ribose transport system permease protein rbsC [Shigella flexneri
           K-227]
          Length = 321

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 89/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +     + +    +   + +                   Q 
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALTLGAAIGAVTGVIVAKGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        +     ++G+ FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A       +   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|332716848|ref|YP_004444314.1| branched chain amino acid ABC transporter, membrane spanning
           protein [Agrobacterium sp. H13-3]
 gi|325063533|gb|ADY67223.1| branched chain amino acid ABC transporter, membrane spanning
           protein [Agrobacterium sp. H13-3]
          Length = 295

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 101/315 (32%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    I    Y + + GL+++ G L +++      Y +GA+   +   
Sbjct: 4   LFGVPVQALLGQLLIGLINGSFYALLSLGLAVIFGLLRVINFAHGAQYMLGAFVAFLGLQ 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +G+S W  + V+ ++    G I+    L    D   +  L+ +     ++        G
Sbjct: 64  YFGISFWWALLVTPLVVALFGAIIERLLLSRLYDLDPLYGLLFTFGLALVVEGTFRWLYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            AG   +                      F+    +  +V++       +    + +T +
Sbjct: 124 AAGQPYSVP----------RELAGGTNLGFMFLPNYRAFVVVISLVACIATWALIEKTRL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
            +  R   +N     +    +       +A+ +   G  G   A         +   +  
Sbjct: 174 GSYLRAATENPTLVQAFGINVPVLLTLTYALGAGLAGFTGVLAAPIYQV--SPLMGTNLI 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+        +L     L                  +      ++ +
Sbjct: 232 IVVFAVVVVGGMGSIMGAIVTGYMLGIAEGLTKVF--------------YPEASNIVIFV 277

Query: 327 ALFLVILMRSHSLLR 341
            +  V+L+R   L  
Sbjct: 278 IMAFVLLIRPAGLFG 292


>gi|323483419|ref|ZP_08088807.1| monosaccharide ABC transporter membrane protein [Clostridium
           symbiosum WAL-14163]
 gi|323691081|ref|ZP_08105363.1| hypothetical protein HMPREF9475_00224 [Clostridium symbiosum
           WAL-14673]
 gi|323403273|gb|EGA95583.1| monosaccharide ABC transporter membrane protein [Clostridium
           symbiosum WAL-14163]
 gi|323504867|gb|EGB20647.1| hypothetical protein HMPREF9475_00224 [Clostridium symbiosum
           WAL-14673]
          Length = 329

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 104/322 (32%), Gaps = 25/322 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +++ K +  +  + V+  ++L        +   + S+  Q+   +  A G+++V+  LG 
Sbjct: 7   MKMLKGNSGIIAVLVIISVILSFASPVFLTTDNLLSVLRQVSNNMYLALGMTLVI-ILGG 65

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+       L    G+ + L I V  ++    G + GL    F+     + 
Sbjct: 66  IDLSVGTCVAMCGTLTAGLMVNQGMPMVLAIAVGLLLGTLAGFLNGLIIATFKVPAFIVT 125

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                            + N   G+               +         F +  + + Y
Sbjct: 126 M---------------SMMNVAKGVAYIYSGGRSIRVSNDVFTGIGTGKLFGVLPLPVVY 170

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
               M  L    I+ L +T        I  N+++       I   +++ F +S      A
Sbjct: 171 ----MIVLIIIFIVVLNKTKFGTYIFAIGGNRESARLSGVPIKKVEIAVFTISGFLAAFA 226

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCG 300
           G   +A      P + +  E   + + V     + GG+ ++S       ++  +      
Sbjct: 227 GIVLSARMYSGQPGVGEGYELDAIAACVLGGISMTGGVGAVSGTIFGALVIGIISNGLNL 286

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +    F  L+       +    
Sbjct: 287 IGLSSFWQLVVKGLIIVLAVII 308


>gi|298292372|ref|YP_003694311.1| inner-membrane translocator [Starkeya novella DSM 506]
 gi|296928883|gb|ADH89692.1| inner-membrane translocator [Starkeya novella DSM 506]
          Length = 293

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/296 (12%), Positives = 88/296 (29%), Gaps = 21/296 (7%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
             +  + A GL +V G   +++L C   YA+GAY  +   +         I V  ++  A
Sbjct: 15  AAVVFLVAAGLQLVFGVQKIVNLACGSFYALGAYFGITAVAAAAAMGLPGIVVLPVLILA 74

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
              I  +     R            ++     +           +          T   +
Sbjct: 75  GLAIGLIGLPVERLLRTVYERDESHQLLLTFGLLLVF-----QDMMRFLWGPTPLTLDNA 129

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
            + +     + +    +   V+     ++  +  +L+RT      R   +N++    L  
Sbjct: 130 YLAYGTAEIAGIRVPTYNLLVIAASIAIAGGLGWFLQRTRTGRIIRATAENREMSEGLGV 189

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                  + F V      + GA         +         +   ++V++GG+ S+    
Sbjct: 190 NSKRIFAAVFTVGCMLGTVGGALVVP--ASAASLEMSVELVVEAFAVVVIGGLGSMRGAM 247

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
               I+  +  +   +                      + + +  V+++R   L  
Sbjct: 248 AGALIVGLIRAVAIMV--------------LPEAEILSIYVVVIAVLILRPAGLFG 289


>gi|289548491|ref|YP_003473479.1| inner-membrane translocator [Thermocrinis albus DSM 14484]
 gi|289182108|gb|ADC89352.1| inner-membrane translocator [Thermocrinis albus DSM 14484]
          Length = 294

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 100/307 (32%), Gaps = 27/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY M A GLS+  G + ++++       +G Y   I+         +    
Sbjct: 10  LFNGLSLASIYFMIAIGLSLSFGYMRIINMAHGEFLMLGGYISYIVQQSNIFPEAVFPLF 69

Query: 99  SAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           S   S     I GL       +     + T++++     IL +      G  G+ V    
Sbjct: 70  SIFFSFIVLFIFGLVFWYLILKRVQNTLDTILLTWGLSLILQQLVRDAFGPTGVGVVPP- 128

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                               V   +   Y+++ M F+   + L   +T +    R +  +
Sbjct: 129 ---------KWLSTTLYLGGVYIPVVRIYIIVVMLFVLLLLYLLFFKTDLGLNLRAVAQD 179

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   ++        L  FA+ S   G  G+  +             S  +    +VI G
Sbjct: 180 RETASAMGINDDLVNLLIFALGSGIAGAGGSALSMVSSI--TPTTGMSYIVDAFLVVIFG 237

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ SL      + I+  +  +  G                      L+++++ L I  R 
Sbjct: 238 GVGSLGGTLLGSIIIGFMSAIFSGYMEVSLAKA-------------LVLMSVILFIQFRP 284

Query: 337 HSLLRLR 343
             L+ ++
Sbjct: 285 TGLISVK 291


>gi|226940633|ref|YP_002795707.1| RbsC [Laribacter hongkongensis HLHK9]
 gi|226715560|gb|ACO74698.1| RbsC [Laribacter hongkongensis HLHK9]
          Length = 312

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 93/312 (29%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  ++L        +   I ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 16  LIALVLISIVLTFLSPDFLTLNNILNVMRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 74

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +       +     +   +    +      +      +        IATL    IF+ 
Sbjct: 75  LSSVLIAGWITAGMDPVLATLLGIGVGGVMGLI--NGVVIYQGRVAPFIATLATMTIFRG 132

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                     G  V  L   F            +   ++ M    A
Sbjct: 133 LALVVTD-----------------GRPVTGLHSDFFSMLGGGYVASLVPVPVIWMLVAFA 175

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   LR+T        I  N++A       +   K + +A+S A   MAG    +  + 
Sbjct: 176 VLWFVLRKTTFGRHVYAIGGNEEASLISGVRVSQIKPAVYALSGALSAMAGVILTSRLNS 235

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P+     E   + ++V     + GG   +        ++  +      +    F   +
Sbjct: 236 AQPNAGSGYELDAIAAVVLGGTSLAGGRGWIVGTLIGALLIGVLNNGLNLLGVSSFYQQV 295

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 296 IKGAVILLAVLL 307


>gi|325496223|gb|EGC94082.1| sugar transporter subunit: membrane component of ABC superfamily
           [Escherichia fergusonii ECD227]
          Length = 358

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/313 (9%), Positives = 89/313 (28%), Gaps = 10/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  +V   +         S     +M   + I+ + A G+ ++V   G + L+     
Sbjct: 41  AFIALLVIIAVFSSLSPNYFSGANFLTMASHVAIFGLPAIGM-LLVILNGGIDLSVGSTL 99

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       +     +    ++    + + A   +     +      L    +    +  
Sbjct: 100 GLAGVCAGFMMQGINIEALGVVLYLPVWAVAILTLAVGALVGLVNGIL----IAWCRVPA 155

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +             + + + L +   +    +    F          +   +L +  ++
Sbjct: 156 FVATLGSLYVARGIALLITNGLTYNKLSGSESLGNTGFDWLGFNRIFTVPIGVLILGIVA 215

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    L +TA          N++A       +   K+S + +S     MAG   ++   
Sbjct: 216 LACGFLLSKTAFGRWLYASGGNERAAELSGVPVKRVKISVYVLSGICAAMAGLVLSSQLT 275

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG  ++        ++  + +    +    +   
Sbjct: 276 SAGPTAGTTYELTAIAAVVIGGAALTGGRGNVRGTLLGAFVIGFLSDGLVIIGVSAYWQT 335

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 336 VFTGAVIVLAVLL 348


>gi|325970175|ref|YP_004246366.1| ABC transporter transmembrane protein [Spirochaeta sp. Buddy]
 gi|324025413|gb|ADY12172.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp.
           Buddy]
          Length = 332

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 87/306 (28%), Gaps = 26/306 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           +LL        S+  I ++  Q+   +  A  ++IV+  LG + L+     A+       
Sbjct: 41  VLLSFLSPVFLSKNNILNVLRQVATNLYIACAMTIVI-ILGGIDLSVGSTVALSGVITGG 99

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
             +  GL +W+ +    +     G   G    K           I++    NI      +
Sbjct: 100 FIAFEGLPLWVAVVCGLLSGMVVGAFNGFLISKTTIPPF-----IVTLSTMNIARGASYV 154

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G                    +    F      Y   +   ++ +  +    +L + +
Sbjct: 155 YTGGQ---------------PIRVMSDSFNFIGSGYVGDIPMPIIYLVIIVIISVLIMSK 199

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           + +      +  N  A              A+  S     +AG   A+      P   + 
Sbjct: 200 SKLGRHIYAVGGNPIAARFSGIKNSRVLFFAYLFSGLMSAIAGIVLASRMFSGQPTAGQG 259

Query: 264 SENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           +E   + ++V     + GG+  +        I+  +      +    F   +       +
Sbjct: 260 AEMDAIAAVVLGGTSMSGGVGKIGGTVIGALIIGVLSNGLNLLGINSFWQYIVKGVVILI 319

Query: 319 RHTTLM 324
                 
Sbjct: 320 AVYVDF 325


>gi|264676231|ref|YP_003276137.1| UrtA [Comamonas testosteroni CNB-2]
 gi|262206743|gb|ACY30841.1| UrtA [Comamonas testosteroni CNB-2]
          Length = 289

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 96/291 (32%), Gaps = 25/291 (8%)

Query: 53  AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112
           A GL+++ G +G+++L     Y IGAY    L    G    +++    +++   G  +  
Sbjct: 24  ASGLTLIFGIMGVINLAHGSFYMIGAYVAFSLAPYLGQHFIIMLLAGVVLAVVLGYFLEW 83

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
               F  +   +  ++M+     +    + I  G             G    + +     
Sbjct: 84  AFFSFLYERDHLQQVLMTYGLILVFEGLRAILVGNDVH---------GVEKPAWLAGSFP 134

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
               + Y  +  +       ++  +   + RT +    R    N+     L   I     
Sbjct: 135 LMGMMQYPWYNVFAAAACLLVALLMYYTVNRTRLGMMIRAGASNRDMVRGLGINIKRLYR 194

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             FAV  A   +AG   A             S  II   +V++GG+ S++    A+ ++ 
Sbjct: 195 IVFAVGVALAALAGMIAAPMSSV--YPNMGSSVLIICFVVVVIGGIGSITGALIASLLVG 252

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            V                     F       + + + ++++ R   L+  R
Sbjct: 253 FVDTFGKVF--------------FQELSGMSIYLLMAVILVWRPEGLMGKR 289


>gi|294139404|ref|YP_003555382.1| ribose ABC transporter permease protein [Shewanella violacea DSS12]
 gi|293325873|dbj|BAJ00604.1| ribose ABC transporter, permease protein [Shewanella violacea
           DSS12]
          Length = 323

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/302 (10%), Positives = 81/302 (26%), Gaps = 23/302 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +   V   ++ +      +   + ++  Q  +  + A G+++V+ + G + L+     
Sbjct: 23  ALIALFVLIAVVSILNDQFFTMGNLMNILRQTSVNAIIAVGMTLVILTAG-IDLSVGAIL 81

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       +          L     +      M   L S                + F 
Sbjct: 82  ALTGALGASMVGAELPLTLALPLTLLLGGALGAMNGLLISK------------GKVQAFI 129

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+    I            +    T       F        +       ++       
Sbjct: 130 ATLVTMTAIRGLTMVYTEGRPISTGFTDTADNFAFIGTGWLAGVPVPVWMMLI-----TF 184

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + + L  T +      I  N+ A       +   K++ + +S     +AG    +   
Sbjct: 185 VLVWVMLTHTRLGRYIYAIGGNESAARLSGINVDRVKVAVYGLSGMMAALAGLIVTSRLS 244

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++V+      GG   +        I+  +      ++   +  +
Sbjct: 245 SAQPTAGTSYELDAIAAVVVGGASLAGGRGFIWGTLVGALIIGFLNNALNLLDVSSYYQM 304

Query: 310 LK 311
           + 
Sbjct: 305 IA 306


>gi|303239451|ref|ZP_07325978.1| inner-membrane translocator [Acetivibrio cellulolyticus CD2]
 gi|302593014|gb|EFL62735.1| inner-membrane translocator [Acetivibrio cellulolyticus CD2]
          Length = 332

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 97/280 (34%), Gaps = 3/280 (1%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V  + LF ++       Y  ++    +  ++    LS++ G  G+ S      + IGAY
Sbjct: 1   MVVIIFLFAYMMPLWVNPYQINIYTYFMTTILLCLSLSLIWGMTGIFSFAQATFFGIGAY 60

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y ILG         ++ +   +  A      L    F   Y  +  + +  I     I 
Sbjct: 61  AYGILGRLMENPSITILIMVLAVLLAALAAGIL---GFFMFYGGVNDVFVGLITLCFAIA 117

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           +       AG   + +   LG                 + +I  Y  +L +       + 
Sbjct: 118 FHTFMMQTAGPEWSIKGIELGGWNGLYQIPKLTIFGLQMNDIVYYLFVLSIVLFIYLGMK 177

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +++T I  +   +R+N+     L   +   +   FAV     G+AG  +++    +SP 
Sbjct: 178 KIQKTKIGYSMLAVRENRSRSELLGFNVPAVQTLVFAVGGGIAGLAGVLYSSWGTYVSPS 237

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
               + + + + +V  GG  + +       I         
Sbjct: 238 NITIAASTLPVVLVAAGGRKNSTASMIFAGIYCVFTNQLA 277


>gi|227831443|ref|YP_002833223.1| inner-membrane translocator [Sulfolobus islandicus L.S.2.15]
 gi|229580364|ref|YP_002838764.1| inner-membrane translocator [Sulfolobus islandicus Y.G.57.14]
 gi|284998979|ref|YP_003420747.1| inner-membrane translocator [Sulfolobus islandicus L.D.8.5]
 gi|227457891|gb|ACP36578.1| inner-membrane translocator [Sulfolobus islandicus L.S.2.15]
 gi|228011080|gb|ACP46842.1| inner-membrane translocator [Sulfolobus islandicus Y.G.57.14]
 gi|284446875|gb|ADB88377.1| inner-membrane translocator [Sulfolobus islandicus L.D.8.5]
 gi|323475793|gb|ADX86399.1| inner-membrane translocator [Sulfolobus islandicus REY15A]
 gi|323478505|gb|ADX83743.1| inner-membrane translocator [Sulfolobus islandicus HVE10/4]
          Length = 348

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 55/350 (15%), Positives = 113/350 (32%), Gaps = 50/350 (14%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV------------- 82
              I ++ +   +Y+M    L++ +G  G+ +   V+AYA GA+                
Sbjct: 6   SSLILAIVLDFSVYLMVVISLNVEIGLTGVPNFGRVLAYAGGAFIAGAIPGRILQLIYGL 65

Query: 83  --------------------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
                                        + L + ++ ++  A G I   P+L+ R DYL
Sbjct: 66  HSDYILNNPSVIAEINDKLLQQPLMALAILILTLILAGIVGAALGYISSYPALRLREDYL 125

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
            I  L+       I I + PI  G  G+ V                F             
Sbjct: 126 GILLLVAGTSLVVIGITYPPIVGGTVGVQVPA-------------VFNALLGQGSSLYYK 172

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +  VLL    +   +      + +   +R +R+N+     L   I   +  A A+     
Sbjct: 173 ISIVLLAFSLVMLLLFNLTSNSPMGRVFRAVRENEDLVEVLGRDIGVIRGKAMALGGFLA 232

Query: 243 GMAGAFFAASRDRISPDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
           G+AG+ +A     +    F   + +     +++LGG  +         I   +  +   +
Sbjct: 233 GIAGSLYAFYIGSVFAGAFDNLTWSFNPYLMLVLGGAGTSIGAMLGALIYSTLYHV---I 289

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           + Y                  L  + L +++++R   ++  +       +
Sbjct: 290 DLYKQTIGYYLHFDAVWLQYMLFGLILTIILIIRPQGIVVEKAKPLVKPK 339


>gi|466955|gb|AAC43243.1| B1620_F2_68 [Mycobacterium leprae]
          Length = 577

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/315 (11%), Positives = 93/315 (29%), Gaps = 33/315 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L  ++            +   +  +  Q ++  +  +G++ V+   G + L+     
Sbjct: 282 FVALIALFVFFTAAAGAKFYAPSNLLVILQQTVVLAIVGYGMTFVI-MAGSVELSVGSIV 340

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+   +  ++ ++   +  +   +  + +G            +      ++TL M ++ +
Sbjct: 341 ALTGVTAALVAAQNQFAAIVTALLVGLAAGMVNG----IVFAYGKIPSFVSTLGMLQVCR 396

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I                          +             +     M ++L+   F++
Sbjct: 397 GI-----------------------TLMISDSSAKPMPFHGILGAMGAMPWILIVCLFVT 433

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               +  + T      + I  N++            K++ FA+     G+ G   A+   
Sbjct: 434 ILAGILFQFTMFGRWVKAIGGNERVATLAGVPTRGIKVAIFAICGLTAGLGGIVLASRLG 493

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +P      E  ++ ++VI      GG+  LS       I+  +      M      S 
Sbjct: 494 AGTPTAATGFEIDVIAAVVIGGTPLTGGLGRLSGTLIGAIIISMLSNGMVFMGVGNAASQ 553

Query: 310 LKFDCSFNMRHTTLM 324
           +             +
Sbjct: 554 IIKGIMLAAAVFVFL 568


>gi|227874346|ref|ZP_03992531.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Oribacterium sinus F0268]
 gi|227839834|gb|EEJ50279.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Oribacterium sinus F0268]
          Length = 324

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/313 (10%), Positives = 81/313 (25%), Gaps = 22/313 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               ++  + L L       +  + S+  Q     + + G+ + + + G + L+      
Sbjct: 16  FAALIILCIALALASPNFLDKANLMSILKQTSFNALLSTGMLLTLITAG-IDLSVGATAT 74

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            GA     +      +   L     ++ G  G+I GL   +    +  ++TL M  +   
Sbjct: 75  FGACVAGAMVRMGVTNPVFLFLAVLVVGGVVGLINGLLLTRLHLPHPFVSTLGMKNVLWG 134

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             +                       +  +                      + +  +  
Sbjct: 135 AALIIT---------------SSQMISFSNTGAEGIMVLGSATILGGFPISFVVVILIYI 179

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + + L +TA+  +      N +A               + +S    G AG         
Sbjct: 180 LMHILLTKTALGRSIYCAGGNMEATRLSGINADNVLTFCYVLSGFMAGFAGIVSIGRSGI 239

Query: 256 ISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +        +   I+  I+GG        ++        I+  +      ++       
Sbjct: 240 SNGANAIQPYDTDAIAACIIGGASFMGGKGTMVGTMLGALIIAVLRNGFTLLSVPSAWQN 299

Query: 310 LKFDCSFNMRHTT 322
           L            
Sbjct: 300 LVLGLVIIGAVLL 312


>gi|33599220|ref|NP_886780.1| putative branched-chain amino acid transport system permease
           [Bordetella bronchiseptica RB50]
 gi|33575266|emb|CAE30729.1| putative branched-chain amino acid transport system permease
           [Bordetella bronchiseptica RB50]
          Length = 309

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 95/305 (31%), Gaps = 16/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y +   G  ++  + G+ +        + A S           +     + A +
Sbjct: 12  LMSGMLYALIGLGFVLIFKASGVFNFAQGAMVLVAALSMARFSEWIPQWLGFENMLLANV 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN----GKAGIYVADRLYF 158
                  + +  L    +   +  L+  E    ++            G+     +     
Sbjct: 72  LAFIVSALVMFVLAVAVERFVLRHLVNQEATTLLMATLGISYFLDGLGQIAFGSSVYSIN 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G      I         ++  +      +    L A++ L+ + T+   A R + D+ +
Sbjct: 132 VGMPKDPAIILETMFEGGLLINLEDLTAAVVAALLVAALALFFQYTSTGRALRAVADDHQ 191

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +    +  ++V+     +AG  + +            +  +  + +VILGG+
Sbjct: 192 AAQSIGIPLNRIWVIVWSVAGLVALVAGIIWGSKFGVQFTLS---TAALRALPVVILGGL 248

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+    ++            ++   +          +   + +L R   
Sbjct: 249 TSVPGAILGGLIIGVGEKMSEVYLGSLVGGGIEIWFA---------YVLALVFLLFRPQG 299

Query: 339 LLRLR 343
           L   +
Sbjct: 300 LFGEK 304


>gi|291286162|ref|YP_003502978.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809]
 gi|290883322|gb|ADD67022.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809]
          Length = 312

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 88/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  ++  +++ L      S   I ++  Q  I  + A G++ V+   G + L+     A
Sbjct: 15  LLGLIILAVIISLINPRFLSVNNILNVLRQTSINAVIAAGMTFVI-LTGGIDLSVGSILA 73

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I       + +        L    ++ +    +     +                + F  
Sbjct: 74  ICGAVSAFMIAADAGVAVTLFTTLSLGTILGVLAGIAITK------------GKVQPFIA 121

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +     T   +  +F     F I       + +       
Sbjct: 122 TLVGMTLLRGATLVFTDGKPISTGYDTAADIYAWFGTGYIFGIPVPVFLMIAVFGISYYV 181

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                 + T        I  N++A       +   K++ +A+S     +AG    +    
Sbjct: 182 L-----KHTRFGRYVYAIGGNEEASRLSGVRVSRVKIAVYAISGLTSAVAGIILTSRLSS 236

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG+ ++        I+  +      MN   +  ++
Sbjct: 237 AQPTAGAGYELDAIAAVVLGGTSLAGGVGTVFGTLTGALIIGILNNALNLMNVSSYYQMI 296

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 297 AKGSVILIAVLM 308


>gi|225568187|ref|ZP_03777212.1| hypothetical protein CLOHYLEM_04261 [Clostridium hylemonae DSM
           15053]
 gi|225162906|gb|EEG75525.1| hypothetical protein CLOHYLEM_04261 [Clostridium hylemonae DSM
           15053]
          Length = 337

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 40/324 (12%), Positives = 93/324 (28%), Gaps = 38/324 (11%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  V   LL+ +   +    + I       ++YV+ A G++ V+   G +  +      
Sbjct: 16  LLCLVAMFLLVGVVNPSFLKPQNILLCFNGSIVYVLIAIGMAFVI-LTGEIDCSIGAQLG 74

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + A                +     +      +                           
Sbjct: 75  LAAAVCATYLREGASWGMAIALCILVGLVCGTI--------------------NGIGVTV 114

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + I    +T G  GIY      + G      +       +       + +  +    +  
Sbjct: 115 LKIPSIIMTLGTNGIYRGLIYLYTGGKWVENLPSGFKQLAQKNVAGNLSWFFVMDLAVMV 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I L+L +T     +  + DN+     +   ++  K+ AF     F       + +    
Sbjct: 175 LIFLFLVKTKRGKRFAAVGDNEAGANLIGIPVLATKMKAFMTCGLFAAFGAILYVSRVGF 234

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           ++       E   + + VI      GG+ ++   +    I+  +  L             
Sbjct: 235 VTAISGNGYEMKAIAACVIGGISLTGGVGTVIGASIGGIIMASISRLLV----------- 283

Query: 311 KFDCSFNMRHTTLMVIALFLVILM 334
            F    +    T+  I L +++++
Sbjct: 284 -FLKISSDYDNTITGILLIVIVVV 306


>gi|149913645|ref|ZP_01902178.1| inner-membrane translocator [Roseobacter sp. AzwK-3b]
 gi|149812765|gb|EDM72594.1| inner-membrane translocator [Roseobacter sp. AzwK-3b]
          Length = 306

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 102/306 (33%), Gaps = 15/306 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + A GL++V G +GL++L     Y I              +  +    
Sbjct: 10  VLNGLQFGVMLFLMAAGLTLVFGVMGLINLAHGSLYMI----------GAFAAAAVAGAT 59

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            + +      +    +     + L +  L   +    +L  +  I             + 
Sbjct: 60  GSFLLALAAALTAAAAAGALVEMLVMRRLYDRDHLDQVLATFALILIFSETTRWVFGSFP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   +   +         + Y ++   ++     ++A++   + RT +    R    +++
Sbjct: 120 LFLDIPDWLSGPVSLPGGIEYSLYRLAIIGTGLAVAAALFWLISRTRLGIRIRAGESDRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+
Sbjct: 180 MIAALGIDISRLYTIVFALGAALAGLAGAMVGAIQSV--QVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335
            S+        ++     L   +    F   +    +    +   + L+ I +  V++ R
Sbjct: 238 GSIRGALVGALLVGLTDTLGGLLLPELFKLFMDTSSASTTGSALASMLIYILMACVLIWR 297

Query: 336 SHSLLR 341
              L  
Sbjct: 298 PRGLFG 303


>gi|311103785|ref|YP_003976638.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310758474|gb|ADP13923.1| inner-membrane translocator 9 [Achromobacter xylosoxidans A8]
          Length = 293

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 92/304 (30%), Gaps = 23/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   IY +   GL+++ G L +++        +GAY    L    G++  + +P+
Sbjct: 9   LINGLILGAIYGLIGVGLNVIFGVLRVVNFAHGEFLVLGAYFAFYLMEYAGINPLVALPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G ++    +             +  +F   ++          G  +      
Sbjct: 69  AFAAFFLAGYLLYFVLIPRLSKADDPEISSLLLMFGVSIM---------LGAIMLLVFDA 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              ++   I         V+        L+    +  ++ ++L R+ +  A R I  N+ 
Sbjct: 120 DARSLPYEIEPVFLKFGPVLIPTVRLLALVIALAIIGALTVFLYRSQLGKALRAIIMNRD 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +          AF +       +G   A      SP M      +I   +++LGG+
Sbjct: 180 AVRIVGINAERLSAVAFGLGIGLAATSGVLVAMVFPAFSPFM-GNDYTLIGFIVIVLGGL 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                      +     ++          ++  F               +   I +R   
Sbjct: 239 GHPVGALVGALLFGVTEQVSVVFFNPSIATICGF-------------ALMVATIFIRPSG 285

Query: 339 LLRL 342
           L   
Sbjct: 286 LFGR 289


>gi|295699841|ref|YP_003607734.1| sugar ABC transporter inner membrane protein [Burkholderia sp.
           CCGE1002]
 gi|295439054|gb|ADG18223.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 351

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 94/310 (30%), Gaps = 23/310 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++ ++      L      + + +  + + + I  +   G+++V+  +  + L+     
Sbjct: 38  LFVVLILLIAGTGLAKPQFLNMQNLRDVLLNVSIIGLLTAGMTVVI-LMRHIDLSVGSTV 96

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + AY+   L   +     L+   + +  G     +    +        +ATL    IF+
Sbjct: 97  GVSAYAVGSLYVAFPHMPVLVALAAGLAIGLVAGGINALLVAVGRVPSLVATLSTLYIFR 156

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                W                        SL   +   ++  +  I    ++  +    
Sbjct: 157 GADYAWVH---------------GGQINATSLPDAYSRLATGTLLGIPTLALIAIVVLAG 201

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            S+ L   R         I  N +A       +    +S F +S A  G AGA + A   
Sbjct: 202 LSVYLKQFRA--GREHYAIGSNPEAARLAGVNVERRVMSGFLLSGAIAGFAGALWLARFG 259

Query: 255 RISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +          +     +V S+ I GG+ ++        +L  +      ++   F   
Sbjct: 260 TVDASTAKGIELQVVAAAVVGSVAITGGVGTILGATLGALVLGVISIALVVLHVSPFWEQ 319

Query: 310 LKFDCSFNMR 319
                     
Sbjct: 320 AIQGALIVAA 329


>gi|253576479|ref|ZP_04853808.1| monosaccharide-transporting ATPase [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251844116|gb|EES72135.1| monosaccharide-transporting ATPase [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 342

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 90/312 (28%), Gaps = 9/312 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++  V  + +  +  +         + IQ    V+ A G++ ++   G   L+     
Sbjct: 21  IYIVLAVLLIGIAAYDPSFIGLNTFRDILIQSSTRVIIALGVAFIL-ITGGTDLSAGRMV 79

Query: 75  AIGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            + A     +     Y    +  +P   +       I+           + ++   +   
Sbjct: 80  GLTAVVSASMLQEVDYARRFFPNLPELPLFVPILIAIVVGLIFGLING-IIVSKFKVPPF 138

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
              +                          +R         S F  +   + Y+++    
Sbjct: 139 IATLGTMVAIYGINSLYFDTEPNQSQPIGGLRDDFTTLGSGSLFSNWSFSIPYIVIIAIV 198

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           + A + +   +T +      I  NQ+A       +    +  ++++ A  G+AG   AA 
Sbjct: 199 VCAIVWVMFNKTRLGKNMYAIGGNQQAAKVSGINVSKNLIMIYSIAGALYGLAGVLEAAR 258

Query: 253 RDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
               + +     E   + + V+      GG+ ++  I     I   +      +    + 
Sbjct: 259 TGGATNNYGNMYELDAIAACVVGGVSTTGGIGTVPGIMAGVLIFTVINYGLTFVGVGPYW 318

Query: 308 SLLKFDCSFNMR 319
             +         
Sbjct: 319 QQIIKGAIIVAA 330


>gi|240141709|ref|YP_002966189.1| putative ABC transporter, permease precursor [Methylobacterium
           extorquens AM1]
 gi|240011686|gb|ACS42912.1| putative ABC transporter, permease precursor [Methylobacterium
           extorquens AM1]
          Length = 289

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 88/306 (28%), Gaps = 26/306 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             + S      +Y + A G  I     G ++     A  +GA        + G  + L I
Sbjct: 4   STLVSGLGLGSMYGLVALGFHITFAVSGTVNFAQGSAVTLGAVLGYTFAVQLGWPMPLAI 63

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +       G+ +    ++      + A L+ +     IL      T GK    +   L
Sbjct: 64  AAALAGCAGLGLAVERLLVRPFVVRGSDAWLLATVAGGIILDNVLLFTFGKEPRSLPSAL 123

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 V                      + +     + +I    R T +      +  N
Sbjct: 124 VAAPVQVLG-----------AGVYPLQLLIPVVGVAAAVAIRAVFRGTELGRVLLAVAQN 172

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   +   +      AFA+S+   G AG   A                I   ++ ILG
Sbjct: 173 SEAARLMGIDVARTVACAFALSAVLAGAAGLLIAPLFSV--SAEMGALFGIKAFAVAILG 230

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S + +  A  +   V                      +     ++   + L + +R 
Sbjct: 231 GIGSATGVVLAGLLYGLVEAGVTATLG-------------SGATQIVVFSVIILALALRP 277

Query: 337 HSLLRL 342
           + LL  
Sbjct: 278 NGLLGR 283


>gi|187921099|ref|YP_001890131.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
 gi|187719537|gb|ACD20760.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
          Length = 326

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 107/294 (36%), Gaps = 22/294 (7%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V      +   A     Y+  + +   I  + A G+  V+  +G  ++     Y   AY 
Sbjct: 13  VALFAAAIAWLAVSEPSYLTQLVVWSAINAVLAAGMRFVL-LIGETNMASGAIYGFAAYV 71

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             I  +     + L++  +A+ +G  G++ G  +L+ +G Y  +     +E+ +    + 
Sbjct: 72  TAIAVTNGFDVVPLVVVTAAIAAGVLGLLFGWVTLRVKGPYFMLIGFAFTEVVRLAYTRI 131

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +      + +   +                       + +M  + +G+C+L  S    
Sbjct: 132 DYVGGNSGMVGIYAPMS---------------------LDRWMPALCVGICYLLVSGFFV 170

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             +++     R IR+N K   +L  + +  KL  F +++  +G AGA  A S   ISP  
Sbjct: 171 AEKSSFGLLMRAIRNNDKVVETLGVSALRVKLVCFCIAALAVGAAGAIHAYSYHVISPGD 230

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           F F   +  ++   +GG   +         L  V ++  G     +        
Sbjct: 231 FSFLIPVYALAYAKVGGERHIVGSVIGAIFLTVVAQVVQGAGALQYVLFGGVII 284


>gi|330859429|emb|CBX69774.1| hypothetical protein YEW_GJ27600 [Yersinia enterocolitica W22703]
          Length = 302

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 82/288 (28%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++ S +       + +  +++      +       
Sbjct: 29  ITYGLLGVINMAHGEMLMLGAYSAYLVQSLFQQLAPHWLALYPLVALPVAFFITAGIGMA 88

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W        G+ +      L     + +         +
Sbjct: 89  LER--TVIRHLYGRPLETLLATWGISLMLIQGVRMIFGAQNLEVANPAWLSGGVQLLPNL 146

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       V+  +  +     L L +T +    R +  N+              + AF +
Sbjct: 147 VLPWNRIAVIAFVVIVLLLTWLLLNKTRLGLQVRAVTQNRAMAACCGVATGKVDMLAFGL 206

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+             I    +V+LGG+  L+    A   L  + ++
Sbjct: 207 GSGIAGLGGV--ALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGSVVAALGLGMLNKI 264

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 265 LEPQIGAVLGKILILVLIILFIQK-------------RPQGLFALKGR 299


>gi|260219964|emb|CBA27028.1| hypothetical protein Csp_A00230 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 298

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 93/305 (30%), Gaps = 18/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S   Q  IY + A G  ++  +   +S        +GA+  ++  +  G+  W+ +P 
Sbjct: 7   LISGVAQGCIYGLIALGFVLIYKATETVSFAQGELMMLGAFGGLVGMTMLGIPYWIAVPS 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+++    ++      A + ++++     +      +  G      A  + +
Sbjct: 67  AILGMAIFGVLLERLVIRPILGQPAFSIVMLTIGIGYVARGLITMIPGIGTDTNALPVPY 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               ++            ++  +    ++     L   +    R T +  A +    NQ 
Sbjct: 127 KDEILKFGGNEMG--IGALVLNVEHLVIIGATGVLCVLLFALFRYTKLGIAMQAASQNQL 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A + +   +      A+ +++A   +AG   A                +      ++GG 
Sbjct: 185 AAYYMGIPVQRLNGLAWGLAAAVAAIAGILLAPITFV---HANMGFIGLKAFPAAVVGGF 241

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        ++  V           F     +     M                + + 
Sbjct: 242 GSLPGAIVGGLVIGLVESFAGFYLPDGFKDTAAYVVVLVMLMV-------------KPNG 288

Query: 339 LLRLR 343
           L   +
Sbjct: 289 LFGEK 293


>gi|254699345|ref|ZP_05161173.1| Bacterial inner-membrane translocator [Brucella suis bv. 5 str.
           513]
 gi|261749791|ref|ZP_05993500.1| inner-membrane translocator [Brucella suis bv. 5 str. 513]
 gi|261739544|gb|EEY27470.1| inner-membrane translocator [Brucella suis bv. 5 str. 513]
          Length = 393

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 57/311 (18%), Positives = 106/311 (34%), Gaps = 39/311 (12%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                + + +  IQ+LI  +FA   S++ G  G+LS    +    G            L 
Sbjct: 20  PYLVSELMTNAAIQMLIAALFATAFSLLCGQAGMLSFGHAMNAFGG---------EGLLP 70

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             LL    A +    G++ G  S K  G Y A+ TL ++E+   +    K    G+AG+ 
Sbjct: 71  TPLLPLAGAGVGLLSGLVAGWFSTKRTGVYFAMITLALAELLHALAPHLKGTFGGEAGVS 130

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                 +      +                 +YY+ L     S  ++  L  T       
Sbjct: 131 SFRMPAWGFDFGSTTE---------------VYYLALAWVVGSILLLFLLTLTPFGRVTV 175

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R+N      L   +       FA+S+ F G+AGA  A + +  +  +F+   +  V+ 
Sbjct: 176 GLRENTHRLRFLGYNVHVLGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVL 235

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
              +GG+ +    A   A +     +   +   +                    +   LV
Sbjct: 236 NSFIGGVGTFFGPAIGAAAMTFFGHVTSDVTRSW---------------LLYQGLIFVLV 280

Query: 332 ILMRSHSLLRL 342
           ++     L+  
Sbjct: 281 MMFLPRGLVGE 291


>gi|146276970|ref|YP_001167129.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025]
 gi|145555211|gb|ABP69824.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025]
          Length = 431

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 98/274 (35%), Gaps = 21/274 (7%)

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + L  P   +++      +G  +L  R DYLAIATL ++EI   ++     +  G   +
Sbjct: 158 PVLLAWPAGGLLAAIAAWAIGKTALGLRSDYLAIATLGIAEIIIAVMKNEDWLARGVKNM 217

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL--------- 201
               R       ++    F  +   +    +    +++ +C+ +  + +           
Sbjct: 218 ISLPRPVPYEVDLQRSAAFVSWAQGWGFDPVTASAIVVKLCYAALFVAVLAIIITLSELA 277

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R+      R IRDN+ A  ++   +    L  F + +A IG+AGA       +++P  +
Sbjct: 278 LRSPWGRMMRAIRDNEVAAAAMGKNVTRRHLQIFVLGAAVIGIAGAMMTTLDSQLTPGTY 337

Query: 262 KFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR- 319
                  +V  +VI+GG  S         ++  +  +   +      ++       +   
Sbjct: 338 NPLRFTFLVWVMVIVGGSGSNWGAVLGGFLIWWLWVMVEPIGLAVMGAVTAGMADGSWLK 397

Query: 320 ----------HTTLMVIALFLVILMRSHSLLRLR 343
                         M + L +V+      L+  R
Sbjct: 398 VHLQDSAAHMRLLTMGLILLIVLRFSPRGLIPGR 431


>gi|308069518|ref|YP_003871123.1| ribose/xylose/arabinose/galactoside ABC transporter permease
           [Paenibacillus polymyxa E681]
 gi|305858797|gb|ADM70585.1| Ribose/xylose/arabinose/galactoside ABC-type transport system,
           permease component [Paenibacillus polymyxa E681]
          Length = 328

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 95/322 (29%), Gaps = 13/322 (4%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +     ++ +         L    +   +  +   I I    A G+++ +   G   L+ 
Sbjct: 10  FRYGAVVVIIGVLAFFSSTLPYFWTYDNLMDILGSIAIVTFVAIGVTLSLIVDG-FDLSV 68

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               ++       L   Y   + ++I VS ++    G++  L  +K R   L        
Sbjct: 69  GATVSLTTVVSASLMVWYEQPVAVVIIVSLVVGALVGLLNSLLIIKLRIPDLLAT----- 123

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                + I          G  + + + F   +         F        + +   ++ +
Sbjct: 124 --LAIMYIVSGIHKTYAQGYTIYNHMQFPDGSKAPGEISPAFLLLGQGKWLGIPISVILL 181

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
               A++ ++L  T           N++A       +   +  A+  S  F  +AG  +A
Sbjct: 182 LLAVAAVHVFLTYTKHGRQMYVTGGNEEAARLSGIRVKKVRTLAYVASGVFAAIAGILYA 241

Query: 251 ASRDRISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           +       D         V ++     V   G  ++        ++  +V     MN  Y
Sbjct: 242 SRVGSGQIDAGSPLLMEAVAAVFVGFSVFGAGKPNVIGTFIGAVLIGVLVNGLTMMNVQY 301

Query: 306 FNSLLKFDCSFNMRHTTLMVIA 327
           F   +       +       + 
Sbjct: 302 FAHDIVKGVVLVLALAVTFYVL 323


>gi|260461033|ref|ZP_05809282.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
 gi|259033067|gb|EEW34329.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
          Length = 331

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 47/350 (13%), Positives = 107/350 (30%), Gaps = 34/350 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           ++K D  L +L +V   ++ +          + +    I ++ + + G + V+   G + 
Sbjct: 1   MSKKDLGLLILILVVGAIVAIINPRFLLPINLANTSNLIGLFGILSIGQAFVI-ITGGIE 59

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+    ++ L +   L   L   +   +    G++ G    + +     +   
Sbjct: 60  LSVGSVVALLGTLFIDLIAVRDLDWPLAFVLIIALGAIIGLVHGWLITRLKLQPFVVTLC 119

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +        +      +G AG         L                 +I    + +V+
Sbjct: 120 GL---LIYRGVARFYTADGTAGFAFGQNFPELEFLTAGRSWGVPNSFIALIVIAIVMWVV 176

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L              R+        I  N++A            ++A+ +      ++  
Sbjct: 177 L-------------HRSVFGRYLYAIGKNEEAAKYSGIRTGRIVMAAYVICGVLTALSAI 223

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGM 301
           +FA     ISP        +  I+  +LGG        SL  +   T +L  +  L   +
Sbjct: 224 YFAMYTRSISPASHGQFYELYAIAAAVLGGFSLRGGEGSLIGVVLGTVLLQELQNLVNLL 283

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                          ++    +  + L  V++ +   + R R       R
Sbjct: 284 -----------GIPSSLNFAVMGGVILIGVLVDQQWGVFRARRLMVEAAR 322


>gi|209546677|ref|YP_002278595.1| monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209537921|gb|ACI57855.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 341

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 43/332 (12%), Positives = 99/332 (29%), Gaps = 34/332 (10%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K D  L LL VV  +++ +          + +    I ++ + + G + V+   G + 
Sbjct: 1   MVKKDLGLLLLIVVVGIVVAIINPRFLLPINLANTANLIGLFGILSIGQAFVI-ITGGIE 59

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+    +V   +   +   L +P+   +    G + G    +       +   
Sbjct: 60  LSVGSLVALLGVLFVDFIAVQDMPWMLALPLILALGAVIGAVHGWLITRLNLQPFVVTLC 119

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +              T G                      F             +    
Sbjct: 120 GLLIYRGAARFYTADGTAG----------------FAFGQNFPELEFLTAGRFYGVPNSF 163

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +  ++  + + L R+        I  N++A            +SA+ +      ++  
Sbjct: 164 IALVIIAVVMWIMLHRSVFGRYLYAIGKNEEAARYSGIRTGRMIMSAYVICGLLTALSAI 223

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGM 301
           +FA     ISP        +  I+  +LGG        S+  +   T +L  +  L   +
Sbjct: 224 YFAMYTRSISPASHGQFYELYAIAAAVLGGFSLRGGEGSIVGVVLGTVLLQELQNLVNLL 283

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
                          ++    +  + L  V++
Sbjct: 284 -----------GIPSSLNFAVMGGVILIGVLI 304


>gi|322368701|ref|ZP_08043268.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haladaptatus
           paucihalophilus DX253]
 gi|320551432|gb|EFW93079.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haladaptatus
           paucihalophilus DX253]
          Length = 371

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 45/329 (13%), Positives = 92/329 (27%), Gaps = 39/329 (11%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +  ++ LI  +   GLS+    L   + +       GA+S   +           I    
Sbjct: 55  NGLMRGLIIGLAGIGLSMTYSILNFANFSHGDYITSGAFSGWAVTYLIAGLGSNNIAGLL 114

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           ++     +      +      +A+   ++      +++           +  A+ +  L 
Sbjct: 115 LVGAGGSVYASSLGITIATTPIAVVLGLVFAGVSTVVLALLIDRIVYRPMRDAEGISLLI 174

Query: 161 TTV-------------------------RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           T+V                                      V        +L+    L  
Sbjct: 175 TSVGVAFVLRYLIVFVFSTENRGTTALQDIPKWNLLLWDGTVRVTAHDLTLLVCTVGLMI 234

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + L L+RT +  A R + DN+                 + +     G+AG      +  
Sbjct: 235 GVHLLLQRTKLGKAMRAMADNEDLARISGIPTERVIRWTWIIGGGLTGIAGYLLVLWKGT 294

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           I    F +   + + + VILGG+ S+        ++     L        F     F   
Sbjct: 295 IVF-QFGWLLLLPIFAAVILGGIGSIYGAILGGLVIGLTWNLSIIWIPSAFGRAAAFG-- 351

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                       + L++L +   L   RT
Sbjct: 352 -----------MMILILLFKPQGLFAGRT 369


>gi|159026231|emb|CAO86387.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 318

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 59/288 (20%), Positives = 113/288 (39%), Gaps = 31/288 (10%)

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGS---------RYGLSIWLLIPVSAMISGACGMIMGL 112
             G LSL     YA+G Y   IL +              ++L + V+ +ISG   +++G+
Sbjct: 30  MAGQLSLATPGFYALGGYVAAILSTKVFTNTGSNYPLTLVFLEMLVAGIISGILAIVLGI 89

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
           P L+ RG YLAIAT+   EI + I +  + IT G  GI+   + +               
Sbjct: 90  PVLRLRGIYLAIATIAWVEILRIIALNLE-ITGGAVGIFAIPQPF--------------- 133

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
                  ++   ++ L + FL+   +  L    I  A+  IR ++ A  ++     + K+
Sbjct: 134 -----TTQLAYLWLALPLLFLTMLFLYRLENIKIGRAFNAIRADELAAAAMGINPTYHKV 188

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
            +F   +    + GA  A   +  +     F  +II ++ V++GG  +         +L 
Sbjct: 189 LSFTFGAVLAAVVGAVSAHFLNTWNSRQGTFDASIIFLAFVLIGGSRTFIGPVVGGIVLT 248

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
            + E+   +     +  +            +  I + L  +     L+
Sbjct: 249 ALPEVLRALGG-VNSLPIWLGNFLRDGRLIIFGILIVLGTIFYPQGLI 295


>gi|77463484|ref|YP_352988.1| branched chain amino acid ABC transporter inner membrane protein
           [Rhodobacter sphaeroides 2.4.1]
 gi|77387902|gb|ABA79087.1| ABC branched-chain amino acid transporter family, inner membrane
           subunit [Rhodobacter sphaeroides 2.4.1]
          Length = 336

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/318 (10%), Positives = 84/318 (26%), Gaps = 19/318 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL------- 95
                   + A G++++ G L   +       A G    ++       +           
Sbjct: 19  LAYGAQLALGALGVTLIYGILRFSNFAHGDTMAFGTMVTILGTWGLQAAGVTAGPLPTAL 78

Query: 96  --IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             +P+   ++ A  +       +F     A  T+++      + +    +        + 
Sbjct: 79  LALPLGIAVTAALVLATDRAVYRFYRRQKAAPTILVIVSLGVMFVMNGIVRFIIGVEEIG 138

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                         R     S  +  +      ++    + A++  +L RT    + R  
Sbjct: 139 FADGERFLITAGDFRKMTGLSEGLAIKTTQAITVVTALIVVAALFWFLNRTRTGKSMRAF 198

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            DN+                 + +++A    AG  +   +         F   + + +  
Sbjct: 199 SDNEDLALLSGINPERVVAVTWILAAALATTAGVLYGLDKSF--KAFTYFQLLLPIFAAA 256

Query: 274 ILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           I+GG+ S         ++             +   +                     +  
Sbjct: 257 IVGGLGSPLGAIAGGFVIAFSEVTVTYAWKKVATYLLPDALAPDGLVQLMSTDYKFAVSF 316

Query: 326 IALFLVILMRSHSLLRLR 343
             L +V+L     L + +
Sbjct: 317 TILIIVLLFMPTGLFKGK 334


>gi|148260059|ref|YP_001234186.1| inner-membrane translocator [Acidiphilium cryptum JF-5]
 gi|326402988|ref|YP_004283069.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|146401740|gb|ABQ30267.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidiphilium cryptum JF-5]
 gi|325049849|dbj|BAJ80187.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 289

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 103/301 (34%), Gaps = 28/301 (9%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +  +  + Y + A GLS+++G  G+++       A+G Y          +  W  + V+ 
Sbjct: 11  NGLVVGIFYALMALGLSLILGLNGVINFAHGTFMALGGYLA--FTLEPYIGFWGGLIVAP 68

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +++   G++     ++       + +L+++     I+        G  G   A   Y   
Sbjct: 69  LLAVVVGVVTERVLIRPLYGRDPLFSLLLTFGLAMIMQDMIRTIWGSIGQPFALPNYLNS 128

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
               S+               F   V+L    ++ ++   LR + I    R    + +  
Sbjct: 129 PLSSSMFFLTG----------FRIVVILITVLVTGALFAVLRFSRIGIRIRAGNADLETI 178

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            SL   I F + + F +     G+AG   A             S  +     +I+GG+ S
Sbjct: 179 SSLGVNIFFLRAANFGIGIFLAGVAGILAAGQLGL--SPTIGDSLIMPAFVAIIVGGVGS 236

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L        I+     L                  + +    ++ + + +V+++R   LL
Sbjct: 237 LMGSVLGGLIIGMASGLTAAF--------------YPVAQEVVIYVIMAVVLVIRPRGLL 282

Query: 341 R 341
            
Sbjct: 283 G 283


>gi|238765126|ref|ZP_04626060.1| Ribose transport system permease protein rbsC [Yersinia
           kristensenii ATCC 33638]
 gi|238696678|gb|EEP89461.1| Ribose transport system permease protein rbsC [Yersinia
           kristensenii ATCC 33638]
          Length = 322

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 88/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAVVSSLSPNFFTLNNMFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +   G+   + +                + F  
Sbjct: 82  LTGAVAASIVGLEVNALVAVGAALALGAFIGGITGVIVAK------------GKVQAFIA 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T V     +F     F +        ++       
Sbjct: 130 TLVMMLLLRGVTMVYTNGSPINTGFTDVGDTFGWFGIGRPFGVPTPIWLMAIVF-----I 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 185 AAWYMLHHTRLGRYIYALGGNESATRLSGISVDKVKIIVYSLCGLLAALAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|149377235|ref|ZP_01894983.1| probable transmembrane ABC transporter protein [Marinobacter
           algicola DG893]
 gi|149358534|gb|EDM47008.1| probable transmembrane ABC transporter protein [Marinobacter
           algicola DG893]
          Length = 295

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 111/315 (35%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L +        +    I    Y + + GL+++ G L +++      Y +GA   V++  
Sbjct: 4   ILGVPVAVLSGQLMLGVINGAFYALLSLGLAVIFGLLKIINFAHGAMYMLGAMCTVLIFD 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +G++ W+ + V+ +I G  G+++    L+       I +L+++     IL        G
Sbjct: 64  AFGVNYWVALFVAPVIVGCFGILLEYFLLRRIAGQDHIYSLLLTFGIALILQGVLTNIYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+  +             +        F+    +  +V++    +  +    + +T +
Sbjct: 124 VSGLRYSMP----------EMFRGGMNLGFMFLPYYRAWVIVAALLVCFATWFMIEKTRL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
            +  R   ++ +        +       +         AGA  A         +   +  
Sbjct: 174 GSYLRAGTEDSQLMQGFGINVPLLISLTYGFGVMLAAFAGALAAPIYSV--SPVMGSNIL 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S++       ++  V                     +      ++ +
Sbjct: 232 IVVFAVVVIGGMGSIAGAVITGLMMGVVEGFTKVF--------------YPEGSAAVIFL 277

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L+R   L  
Sbjct: 278 VMVVVLLIRPSGLFG 292


>gi|126456358|ref|YP_001074404.1| carbohydrate ABC transporter permease [Burkholderia pseudomallei
           1106a]
 gi|167818423|ref|ZP_02450103.1| sugar ABC transporter, permease protein [Burkholderia pseudomallei
           91]
 gi|167905261|ref|ZP_02492466.1| sugar ABC transporter, permease protein [Burkholderia pseudomallei
           NCTC 13177]
 gi|226194843|ref|ZP_03790435.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei Pakistan 9]
 gi|237509838|ref|ZP_04522553.1| ribose transport system permease protein RbsC [Burkholderia
           pseudomallei MSHR346]
 gi|242312101|ref|ZP_04811118.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 1106b]
 gi|254263054|ref|ZP_04953919.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 1710a]
 gi|126230126|gb|ABN93539.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 1106a]
 gi|225933187|gb|EEH29182.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei Pakistan 9]
 gi|235002043|gb|EEP51467.1| ribose transport system permease protein RbsC [Burkholderia
           pseudomallei MSHR346]
 gi|242135340|gb|EES21743.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 1106b]
 gi|254214056|gb|EET03441.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 1710a]
          Length = 310

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/314 (11%), Positives = 87/314 (27%), Gaps = 29/314 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ V   ++L        + +    +  Q  I  + A G++ V+     + L+     
Sbjct: 12  IPIVFVALCVVLAFASPYFLTWRNWSDILRQTSINGILAIGMTYVI-LTKGIDLSVGSVL 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      + G+        +   + +  GA    +   ++        +ATL M  + +
Sbjct: 71  ALAGIVSGLAGAAGH--GLAVSLAAGVACGAALGAINGVAIARLNVPPFVATLGMLSVAR 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                         G+            +              +    + +  + +    
Sbjct: 129 --------------GVTYIANDGSPVANLPDDYLSLGIGRLGPLGMPVLIFAGVALACWW 174

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                  R T        +  N+K+  +    +     S + VS A  G+AG   AA   
Sbjct: 175 VL-----RYTTYGRYLYAVGGNEKSARTSGIGVRKVVFSVYVVSGALAGLAGMILAARTT 229

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                    S  +  I+ V++GG         +        ++  +      +    +  
Sbjct: 230 SA-LPQAGVSYELDAIAAVVIGGTSLSGGQGGVVGTLFGALLIGVINNGLNLLGVSSYYQ 288

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 289 QIAKGLIIVLAVLI 302


>gi|330963606|gb|EGH63866.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 380

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 82/332 (24%), Gaps = 40/332 (12%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------------ 84
            +   +  + L     A G+ ++ G  G+LSL   I + +G+Y   +             
Sbjct: 52  DFRLGLAGKYLSLAFCAVGMVMIWGYGGILSLGQGIFFGLGSYMMAMYLKLEATATDEAA 111

Query: 85  ----GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                         +I  S              +       +  A L     +     + 
Sbjct: 112 SALAAFYGSALPDFMIWNSVEALPWWWKPFESATFTLAAILILPALLAFLFSYAYFKKRV 171

Query: 141 KPITNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             +                I            +      F            +Y +   +
Sbjct: 172 GGVYFSIITLSLASIMSIMIIGQQGYTGGVNGLTDFKTVFGLSLQTQQTPWILYLITTLL 231

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              S ++  ++ R+ +      IRD +             K   FAV++    + G  F 
Sbjct: 232 LLASVAMCGFILRSRLGKVIVAIRDREDRVRFSGYNTALFKAFIFAVAALISALGGVMFT 291

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                 SP +     +  ++    LGG  SL      T ++                   
Sbjct: 292 LQVGLASPSLVGIIPSTEIVIYAALGGRLSLVGAVYGTLLIGAAKTYLSE---------- 341

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +F       +      V+L     L  L
Sbjct: 342 ----NFVSFWQYFIGFLFMGVVLFLPTGLAGL 369


>gi|290473133|ref|YP_003465994.1| high-affinity D-ribose ABC transporter membrane protein
           [Xenorhabdus bovienii SS-2004]
 gi|289172427|emb|CBJ79194.1| high-affinity D-ribose transport protein (ABC superfamily,
           membrane) [Xenorhabdus bovienii SS-2004]
          Length = 323

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/312 (8%), Positives = 91/312 (29%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++  +++  F     +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 24  LIALLILIVVVSFFSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +        + +      ++A   +++      
Sbjct: 83  LTGAVAASMVGTDVNALVAVAAALALGAAIGACTGVIVAKGKVQAFIATLVMML------ 136

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G   +Y        G +  + +  +      +     ++ +LL       
Sbjct: 137 -------LLRGVTRVYTDGSPINTGFSDNADLFGWFGIGRPLGVPAPVWIMLLVFATAWY 189

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +      T +      +  N+ A       +   K+  +++      +A     A    
Sbjct: 190 ILH----HTRLGRYIYALGGNESATRLSGINVDKIKIIVYSLCGLLAALASIIEVARLSS 245

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +       ++
Sbjct: 246 AQPMAGSGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGISSNYQMI 305

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 306 VKAVVILLAVLV 317


>gi|257469622|ref|ZP_05633714.1| ribose ABC transporter permease protein [Fusobacterium ulcerans
           ATCC 49185]
 gi|317063858|ref|ZP_07928343.1| ribose transport system permease RbsC [Fusobacterium ulcerans ATCC
           49185]
 gi|313689534|gb|EFS26369.1| ribose transport system permease RbsC [Fusobacterium ulcerans ATCC
           49185]
          Length = 308

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 87/312 (27%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V++ +++        S   I ++  Q  I  + A G++ V+   G + L+     A
Sbjct: 11  LIGLVIFSIIVAFLNPRFLSMANILNVLRQTSINSIIAIGMTFVI-LTGGIDLSVGSILA 69

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                   L +     +  LI    + +                       L+     Q 
Sbjct: 70  FCGAVMAYLLNSGLNPLLALIITLLLGTIFG---------------FFNGFLVSVMKLQA 114

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            ++    +T  +    V      +      ++             I +Y ++        
Sbjct: 115 FIVTLVTMTFLRGATLVFTDGKPITVRDGGMLFENIGDGYLFNIPIPIYIMVFLFIGGHY 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +      T        I  N++A       +   K+  +    A   +AG    +    
Sbjct: 175 LLA----HTKFGRYTYAIGGNEEATKLSGINVNVIKIWVYGTCGALAALAGVITTSRLFS 230

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG+  ++  A    I+  +      ++   +  ++
Sbjct: 231 AQPTAGTGYELDAIAAVVLGGTSLAGGVGKVTGTALGAIIIGVLGNALNLLDVSSYYQMM 290

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 291 IKALVILIAVLI 302


>gi|238759538|ref|ZP_04620700.1| Ribose transport system permease protein rbsC [Yersinia aldovae
           ATCC 35236]
 gi|238702197|gb|EEP94752.1| Ribose transport system permease protein rbsC [Yersinia aldovae
           ATCC 35236]
          Length = 322

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 90/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAVVSSLSPNFFTLNNMFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +   G+   + +                + F  
Sbjct: 82  LTGAVAASIVGLEVNALVAVGAALALGAFIGGITGVIVAK------------GKVQAFIA 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T V     +F      +   + +   +  M  +  
Sbjct: 130 TLVMMLLLRGVTMVYTNGSPVNTGFTDVADTFGWFG-----IGRPLGVPTPIWLMAIVFI 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 185 AAWYMLHHTRLGRYIYALGGNESATRLSGISVDKVKIIVYSLCGLLAALAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|220924322|ref|YP_002499624.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219948929|gb|ACL59321.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 295

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 103/304 (33%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+I+ G L +++      Y +GA+   +L +  G+  W  + +
Sbjct: 16  LLLGLINGSFYAILSLGLAIIFGLLNIINFTHGAQYMMGAFVAWMLLNYAGIGYWWALLL 75

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +  G  G+I+    +        +  L+++     I+        G +G+  A     
Sbjct: 76  APLAVGLFGVILERLLIARLYKLDHLYGLLLTFGLALIIQGLFRNQYGVSGLPYAIPAEL 135

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G               F+    +  +V++    +  +  L + +T +    R   +N  
Sbjct: 136 SG----------GQRLPFMFLPNYRGWVVVASLVVCLATWLVIEKTKLGAYLRAATENPT 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +    A    AG   A                I+V ++V++GGM
Sbjct: 186 LVQAFGVNVPLLLTLTYGFGVALAAFAGVLAAPVYSV--NPNMGADIIIVVFAVVVIGGM 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L  V  L                  +    +T++ + + LV+L++   
Sbjct: 244 GSILGSIVTGFTLGLVEGLTKVF--------------YPEASSTVIFVIMVLVLLVKPAG 289

Query: 339 LLRL 342
           L   
Sbjct: 290 LFGR 293


>gi|271962942|ref|YP_003337138.1| D-ribose transporter permease [Streptosporangium roseum DSM 43021]
 gi|270506117|gb|ACZ84395.1| D-ribose transport system permease protein [Streptosporangium
           roseum DSM 43021]
          Length = 327

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 93/297 (31%), Gaps = 27/297 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
           G   +   + ++G+Q  +  + A+G + V+   G + L+     A+ A       +  GL
Sbjct: 44  GDFLTVTNLLNVGVQAAVTAILAFGATFVI-ITGGIDLSVGSVAALSAIVLAWTATDAGL 102

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              L   ++  +  ACG++        +      ATL M  + + + +            
Sbjct: 103 PWPLATVIALGVGLACGLVNAALIAYGKLPPFI-ATLAMLGVARGLAL------------ 149

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                   + +    +               ++   ++ M  +     + L RT    A 
Sbjct: 150 --------VISQGSPIAMPEAVSHLGDTIGDYLPVPVVVMLIMGLITAVILSRTYTGRAM 201

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N++A       +   KL  +A++  F  +AG   A+      P      E   + 
Sbjct: 202 YAIGGNEEAARLSGINVNRQKLITYALAGLFAAVAGIVLASRLASAQPQAAAGYELDAIA 261

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           ++VI      GG            IL  +      ++   F   +       +    
Sbjct: 262 AVVIGGASLSGGKGRAFGTFVGALILAVLRNGLNLLSVSAFWQQVVIGVVIALAVLL 318


>gi|15602019|ref|NP_245091.1| ribose ABC transporter permease protein [Pasteurella multocida
           subsp. multocida str. Pm70]
 gi|12720372|gb|AAK02238.1| RbsC [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 322

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/311 (10%), Positives = 84/311 (27%), Gaps = 23/311 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++ +      S   I ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 20  IIALLVLIAIVSMINPDFFSVDNILNILRQTSVNAIIAVGMTFVILIAG-IDLSVGSVLA 78

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + S     + ++     + +   G+   + +                + F  
Sbjct: 79  LTGAIAASMVSTELPILLVIPVTLLIGTLLGGISGVIVAK------------GKVQAFIA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +              F I         +       
Sbjct: 127 TLVTMTLLRGVTMVYTDGRPISTGFSEGADTFSLLGTGYVFGIPVPIWIMAFVFAASWYV 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                 + T I      +  N+ A       +   K+  FAVS     +AG    +    
Sbjct: 187 L-----KHTRIGRYIYALGGNEAATQLSGINVNKIKIFVFAVSGFLSALAGLIVTSRLSS 241

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+     +GG   +        I+  +      ++   +  ++
Sbjct: 242 AQPTAGVSYELDAIAAVVVGGTSLMGGKGRVMGTLIGALIIGFLNNALNLLDISSYYQMI 301

Query: 311 KFDCSFNMRHT 321
                  +   
Sbjct: 302 AKALVILVAVL 312


>gi|149197198|ref|ZP_01874250.1| probable sugar transporter permease protein [Lentisphaera araneosa
           HTCC2155]
 gi|149139744|gb|EDM28145.1| probable sugar transporter permease protein [Lentisphaera araneosa
           HTCC2155]
          Length = 426

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/294 (11%), Positives = 84/294 (28%), Gaps = 35/294 (11%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +        + ++  +     + A G+++++ + G + L+     A+      +      
Sbjct: 143 VSTFLKASNLKTLPDKTAKTAIIAIGMTMIIITAG-IDLSVGSLVALATVVATMTLQNGF 201

Query: 90  -----LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                  +     ++ + +      +             I TL M  I + + +      
Sbjct: 202 GNSSSPVMIGCSFLAGIAAAGFCGFINGTLTTIFKVPSFIVTLAMMLIARGLALNLTGNQ 261

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
             K G+     L                              ++ M  L       + +T
Sbjct: 262 TIKVGLPDISWLGQTPNP------------------------IILMLLLYGLAYFVMHKT 297

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                   I  N++A       +    +S + +S    G+AG   A+  +  S +  +  
Sbjct: 298 IFGRQIYAIGGNEEAARLSGVPVKRVLISVYTISGIMAGIAGIVMASELNSGSGEFGQTW 357

Query: 265 ENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           E  ++ ++V+     +GG   +       AI+  +      M        +   
Sbjct: 358 ELNVIAAVVVGGTSLMGGQGKIIGTLIGCAIIEVINNGMNLMAISSNTQQIVLG 411


>gi|87311348|ref|ZP_01093469.1| sugar (D-ribose) ABC transporter, permease protein [Blastopirellula
           marina DSM 3645]
 gi|87285928|gb|EAQ77841.1| sugar (D-ribose) ABC transporter, permease protein [Blastopirellula
           marina DSM 3645]
          Length = 367

 Score = 62.6 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 46/335 (13%), Positives = 105/335 (31%), Gaps = 34/335 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L V+  ++  +F         + ++     +Y +   G++ V+   G + L+     
Sbjct: 1   MLFLLVLICVVTAIFRPRFVEPGNLANIIRWTSLYGVMGIGVAFVI-ITGGIDLSIGSML 59

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA--------- 125
           A+    + +L ++Y L     I +  ++S   G++ GL   K +     +          
Sbjct: 60  ALVGSLFGVLMAQYNLPPAAAIMMVLVMSTLLGLVYGLLITKLKLQPFVVTLCGLLILRG 119

Query: 126 ------------------TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
                              LI  E     +     I  G    +             +L 
Sbjct: 120 LARATAGGSSVGGFQRLSYLINYEWGSIPVPFLPWINEGYWSFHKWLPSRGDQPGHFALN 179

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                 S      + ++  +L +  ++    ++L  T      + +  N++A        
Sbjct: 180 DAGERISLDWYDWVPLHPPILYLAAIAIIAAIFLNWTVFGRHLKALGKNEQAARYSGVRT 239

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSL 281
               + ++ + +A  G+AG  F+     + P  F     +  I+  +LGG        S+
Sbjct: 240 DTMVIISYMICTAMAGVAGVLFSIDIGSVMPSTFGNFYELYAIAAAVLGGCSLRGGEGSI 299

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
             +   TAIL  +       +       +      
Sbjct: 300 IGVVIGTAILRVLQNSIEMWSIQELEFAVVGGVIL 334


>gi|56965307|ref|YP_177039.1| ribose ABC transporter permease [Bacillus clausii KSM-K16]
 gi|56911551|dbj|BAD66078.1| ribose ABC transporter permease [Bacillus clausii KSM-K16]
          Length = 314

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 82/297 (27%), Gaps = 25/297 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               S   + ++  Q+ I  + A+G++ V+   G + L+     A        L S    
Sbjct: 32  PGFLSAPNLLNVLRQVSINALIAFGMTFVI-LTGGIDLSVGAILAFSGAVTATLLSSGMD 90

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              L I +  ++  A G I G+   K +                   +    I  G   +
Sbjct: 91  -PILAILIGLLVGAALGAINGIIIAKGKVAPFIAT------------LATMTIYRGATLM 137

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
           +   R                     +        +          + L L++T      
Sbjct: 138 FTDGRPVSNLGDSTLFQMLGGGYFFGIPMPAITMMI------SFVILYLILKKTTFGRRV 191

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N++A       +   K+  ++++     +AG    +  +   P      E   + 
Sbjct: 192 YAVGGNEEASILSGIKVDRIKIYVYSLTGFLAAVAGVILTSRLNSAQPTAGTMYELDAIA 251

Query: 271 SIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           ++V     + GG   +        I+  +      +    F   +       +    
Sbjct: 252 AVVLGGTSLTGGKGWIVGTLIGALIIGVLNNGLNLLGVSSFFQQMVKGSVILLAVLL 308


>gi|212709312|ref|ZP_03317440.1| hypothetical protein PROVALCAL_00347 [Providencia alcalifaciens DSM
           30120]
 gi|212688224|gb|EEB47752.1| hypothetical protein PROVALCAL_00347 [Providencia alcalifaciens DSM
           30120]
          Length = 325

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 94/322 (29%), Gaps = 27/322 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLG-ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           RL K    L L+ ++              +   + ++  Q+ I  + A G++  +   G 
Sbjct: 20  RLTKIPAFLPLVGLIILFACMSIFNEHFLTVNNLSTIARQVSINAIIAIGMTFAI-LTGG 78

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+       L   YG+   L I +  +   A G + G+ +   +   + + 
Sbjct: 79  IDLSVGAVMALSGTLMAGLMKYYGMDPSLAITLGLLSGIAFGFVNGILTAYGKMPPIIVT 138

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
              M       LI          G  ++          R  +   + P   ++    ++Y
Sbjct: 139 LGAMIIAKGLALIY-------TGGYPISGLPQEFAFWGREELMGIQVPILLMLGLYLIFY 191

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           V+L                        I  N++A       +   K+  + +S      A
Sbjct: 192 VVL-------------NHIPFGRYIYAIGGNEEAARLSGIRVERYKMLVYVISGFTAAFA 238

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCG 300
           G  F +      P+     E   + ++V     I GG   +        IL  +      
Sbjct: 239 GLIFTSRVMSGQPNAGVGFELDAIAAVVLGGASIAGGRGMIIGTLIGAMILGVLNNGLNL 298

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +    +   +            
Sbjct: 299 LGISPYVQYIVKGLIIWGATLI 320


>gi|297201524|ref|ZP_06918921.1| sugar ABC transporter permease [Streptomyces sviceus ATCC 29083]
 gi|197716943|gb|EDY60977.1| sugar ABC transporter permease [Streptomyces sviceus ATCC 29083]
          Length = 337

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 89/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++  +   +      +      +  Q+++    A G ++++ + G + L+C    A
Sbjct: 35  LVALLLACVFFAVSSDQFLTGGNFSLIVQQVMVVGTLAIGQTLIILTAG-IDLSCGAVMA 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            G+     + +   L   + I +  ++ G  G++ GL   K           I++    N
Sbjct: 94  FGSIVIAKMAAEGSLPPLVAIALGLVVCGGFGLLNGLLVQKIPLPPF-----IVTLGMLN 148

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +      I + +  +               +        S V   +F             
Sbjct: 149 VAFALTHIYSEEQTVTNLPGPLTALGQTFPMGHTDITYGSLVTIGLF------------L 196

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L  T        + ++Q+A            +  + V+    G+A     +    
Sbjct: 197 LLAYALSSTGWGRHVYALGNSQEAARLNGIRTSRLTIGVYTVAGLLYGVAALLLISRTGV 256

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P   +      + ++V+      GG  S+        I+         M        L
Sbjct: 257 GDPQAGQTDNLDSITAVVLGGTSLFGGRGSVLGTFIGVLIVGVFRNGLQLMGVASIYQTL 316

Query: 311 KFDCSFNMRHTT 322
                  +  T 
Sbjct: 317 ITGVLVILAVTV 328


>gi|154246645|ref|YP_001417603.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154160730|gb|ABS67946.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 289

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 101/304 (33%), Gaps = 29/304 (9%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +   +YV+ A GLSI+ G LG+++      +AIGAY  ++L  ++    W    ++
Sbjct: 10  VNGLVLGFLYVLIAVGLSIIFGMLGIVNFAHGAFFAIGAYLALVLTQQF---GWGAALLA 66

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++G  GM++ +  ++   D   + +LI++     ++     +  G A    +      
Sbjct: 67  PLLTGLIGMVVEMVLIRRLYDKEPLISLILTFALALLVEAVLRLVFGGAPQPFSPP---- 122

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                            ++   +   VL        +   +L  T      R    + + 
Sbjct: 123 ------RPLAGFVEWGAILITTYRVAVLCVTIAALVAFWAFLAFTPFGRIIRAGSRDPEM 176

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L   +       F +     G+AG                 +  +    IV +GG+ 
Sbjct: 177 VGLLGINLPIVLSGVFGIGCLLAGLAGMLAGPL--WTVSPAIGAAAIMPAFVIVTIGGLG 234

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S      A  ++  V  L       +                  M + + +V++ R   L
Sbjct: 235 SYRGAIVAGLMVGLVTALTVQFYPDWSG--------------VAMYVLMAVVLIARPRGL 280

Query: 340 LRLR 343
              +
Sbjct: 281 FGEK 284


>gi|126462339|ref|YP_001043453.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
 gi|221639343|ref|YP_002525605.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131]
 gi|332558362|ref|ZP_08412684.1| branched chain amino acid ABC transporter inner membrane protein
           [Rhodobacter sphaeroides WS8N]
 gi|126104003|gb|ABN76681.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
 gi|221160124|gb|ACM01104.1| Inner-membrane translocator precursor [Rhodobacter sphaeroides
           KD131]
 gi|332276074|gb|EGJ21389.1| branched chain amino acid ABC transporter inner membrane protein
           [Rhodobacter sphaeroides WS8N]
          Length = 336

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/318 (10%), Positives = 84/318 (26%), Gaps = 19/318 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL------- 95
                   + A G++++ G L   +       A G    ++       +           
Sbjct: 19  LAYGAQLALGALGVTLIYGILRFSNFAHGDTMAFGTMVTILGTWGLQAAGVTGGPLPTAL 78

Query: 96  --IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             +P+   ++ A  +       +F     A  T+++      + +    +        + 
Sbjct: 79  LALPLGIAVTAALVLATDRAVYRFYRRQKAAPTILVIVSLGVMFVMNGIVRFIIGVEEIG 138

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                         R     S  +  +      ++    + A++  +L RT    + R  
Sbjct: 139 FADGERFLITAGDFRKMTGLSEGLAIKTTQAITVVTALIVVAALFWFLNRTRTGKSMRAF 198

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            DN+                 + +++A    AG  +   +         F   + + +  
Sbjct: 199 SDNEDLALLSGINPERVVAVTWILAAALATTAGVLYGLDKSF--KAFTYFQLLLPIFAAA 256

Query: 274 ILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           I+GG+ S         ++             +   +                     +  
Sbjct: 257 IVGGLGSPLGAIAGGFVIAFSEVTVTYAWKKVATYLLPDALAPDGLVQLMSTDYKFAVSF 316

Query: 326 IALFLVILMRSHSLLRLR 343
             L +V+L     L + +
Sbjct: 317 TILIIVLLFMPTGLFKGK 334


>gi|330876827|gb|EGH10976.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 375

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 82/332 (24%), Gaps = 40/332 (12%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------------ 84
            +   +  + L     A G+ ++ G  G+LSL   I + +G+Y   +             
Sbjct: 47  DFRLGLAGKYLSLAFCAVGMVMIWGYGGILSLGQGIFFGLGSYMMAMYLKLEATATDEAA 106

Query: 85  ----GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                         +I  S              +       +  A L     +     + 
Sbjct: 107 SALAAFYGSALPDFMIWNSVEALPWWWKPFESATFTLAAILILPALLAFLFSYAYFKKRV 166

Query: 141 KPITNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             +                I            +      F            +Y +   +
Sbjct: 167 GGVYFSIITLSLASIMSIMIIGQQGYTGGVNGLTDFKTVFGLSLQTQQTPWILYLITTLL 226

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              S ++  ++ R+ +      IRD +             K   FAV++    + G  F 
Sbjct: 227 LLASVAMCGFILRSRLGKVIVAIRDREDRVRFSGYNTALFKAFIFAVAALISALGGVMFT 286

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                 SP +     +  ++    LGG  SL      T ++                   
Sbjct: 287 LQVGLASPSLVGIIPSTEIVIYAALGGRLSLVGAVYGTLLIGAAKTYLSE---------- 336

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +F       +      V+L     L  L
Sbjct: 337 ----NFVSFWQYFIGFLFMGVVLFLPTGLAGL 364


>gi|311739889|ref|ZP_07713723.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304962|gb|EFQ81031.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 313

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 98/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  +   + LF+      +   + ++GIQ     + A+G++ V+ + G + L+     
Sbjct: 15  ALVGLIALCIALFIATPYFLTVANLLNIGIQAATVAILAFGMTFVIVTAG-IDLSVGSVA 73

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GA     + S  GL  WL + +  ++    G I G+ +   +                
Sbjct: 74  ALGAMVSAYMFSTAGLPGWLTLLLGLIVGALAGAICGMATAWGKIPSFI----------- 122

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  S I      ++F          ++ M    
Sbjct: 123 -----------ATLAMMSIARGLTLVISQGSPIETAPSVNTFGGDIAGFPVPIIMMVIAG 171

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N +A       +   +++ FA+S  F   AG   A   +
Sbjct: 172 LICWFILERTVLGRSMYAIGGNLEAARLSGLPVKRIQIAVFALSGFFAAWAGMVMAGRLE 231

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG    +       +L  +      +N   F   
Sbjct: 232 SAQPQAGTGYELDAIAAVVIGGASLSGGQGKATGTLVGAILLAVIRNGLNLLNVSSFWQQ 291

Query: 310 LKFDCSFNMR 319
           +       + 
Sbjct: 292 IVIGLVIALA 301


>gi|149377830|ref|ZP_01895561.1| putative branched-chain amino acid transport permease [Marinobacter
           algicola DG893]
 gi|149357888|gb|EDM46379.1| putative branched-chain amino acid transport permease [Marinobacter
           algicola DG893]
          Length = 296

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 96/299 (32%), Gaps = 17/299 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               + Y M + GL+++ G L +++      Y +GA+  +I  S       + + +    
Sbjct: 12  LNVGVFYAMLSLGLAVIFGLLNIINFAHGAMYMLGAFIALIGYSLLEQWFGISLQIG-FW 70

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +      + +  L    +   +  L   +    +L+ +      +        +      
Sbjct: 71  ASLLVAPLIVGILGVTIERFMLKRLYDLDHIYGLLLTFGITLILQGLFANYFNVSGTPYP 130

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
            +           F+ +  +  + ++    +  +    +  T + +  R   +N     +
Sbjct: 131 GQPESLSGVVNLGFMYFPTYRLFAIIFSLVVCFATWYVIEHTKLGSRLRAGVENPDLTQA 190

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
               +       FA  +   G+AG   A         +      I+V ++V++GGM S+ 
Sbjct: 191 FGLNVPLMITLTFAFGAGLAGLAGVLAAPIYSV--SPLMGADLIIVVFAVVVIGGMGSIM 248

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
               +   L  +  L                  +    +T++   + LV+L R   L  
Sbjct: 249 GAILSGLALGLIEGLTKVF--------------YPPAASTVIFFLMVLVLLFRPAGLFG 293


>gi|297243276|ref|ZP_06927211.1| ribose/xylose/arabinose/galactoside ABC-type transporter, permease
           component [Gardnerella vaginalis AMD]
 gi|296888810|gb|EFH27547.1| ribose/xylose/arabinose/galactoside ABC-type transporter, permease
           component [Gardnerella vaginalis AMD]
          Length = 333

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 90/310 (29%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++    L     A  +   I ++GIQ     + A+G + V+ S G + L+     
Sbjct: 34  ALIGLIILCAALSCATPAFLTSVNILNVGIQAATVAILAFGQTFVIVSAG-IDLSVGAVA 92

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AI +      G   GL   L + V  +     G+I G+ +   +                
Sbjct: 93  AISSMLVAYTGVSMGLPPVLTVVVGIVTGALFGLISGVANAFLKLPSFI----------- 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +    I      + F    + +   ++ M  + 
Sbjct: 142 -----------ATLAMMSVARGLTLVVSDGRPISTSGMVNFFGANILGIPMPIVMMIIMG 190

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L  T    +   +  N +A       I   ++  F  S  F  +AG   A    
Sbjct: 191 VIAAVILNFTTTGRSMYAVGGNMEASRLSGINIHKTQIMVFIFSGIFAAIAGLVIAGRLH 250

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + S+VI      GG   +S       +L  +      +N   F   
Sbjct: 251 SAQPQAATGYEMDAIASVVIGGASLSGGKGKISGTFVGAILLAVIRNGLNILNVSSFWQQ 310

Query: 310 LKFDCSFNMR 319
           +         
Sbjct: 311 VVIGLVIAFA 320


>gi|226314696|ref|YP_002774592.1| ribose ABC transporter permease protein [Brevibacillus brevis NBRC
           100599]
 gi|226097646|dbj|BAH46088.1| probable ribose ABC transporter permease protein [Brevibacillus
           brevis NBRC 100599]
          Length = 332

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/315 (12%), Positives = 86/315 (27%), Gaps = 13/315 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + V+  LL  L      +   +  +   I I    A G++  +   G   L+     +
Sbjct: 18  VAVIVIVMLLFSLTNPYFFTYDNLTDILRSISIVTFVAIGVTFSLIVGG-FDLSVGSTVS 76

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +   Y   ++  + V  ++S   G++     +K R   L             
Sbjct: 77  LTTVVSASMMVWYEQGVFTTLVVPIVLSLLVGLVNAFLVVKIRIPDLLAT-------LAM 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + I          G  +   +     +         F        + +   ++    L A
Sbjct: 130 LYIVNGLHMTYSQGYSIYANMPMQDGSQAPGKFQEWFLWLGQGEILSVPVPVILTFLLVA 189

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              ++L  T           N +A       +   +  A+ +S+ F G+ G   AA    
Sbjct: 190 ITHVYLTYTRQGRMLYMTGGNLEAARLSGIPVNRYRTLAYVLSALFAGLGGMLLAARIGT 249

Query: 256 ISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                        V +      V   G  ++        ++  ++     +N  Y+   +
Sbjct: 250 GQVSSGGSMLMDAVAAAFVGFSVFGAGKPNVFGTFVGAILIGVLLNGMTMLNLPYYAYDI 309

Query: 311 KFDCSFNMRHTTLMV 325
                  +       
Sbjct: 310 IKGTVLALALAVTYY 324


>gi|134280931|ref|ZP_01767641.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 305]
 gi|167896875|ref|ZP_02484277.1| sugar ABC transporter, permease protein [Burkholderia pseudomallei
           7894]
 gi|134247953|gb|EBA48037.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 305]
          Length = 310

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 87/313 (27%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ V   ++L        + +    +  Q  I  + A G++ V+     + L+     
Sbjct: 12  IPIVFVALCVVLAFASPYFLTWRNWSDILRQTSINGILAIGMTYVI-LTKGIDLSVGSVL 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      + G+        +   + +  GA    +   ++        +ATL M  + +
Sbjct: 71  ALAGIVSGLAGAAGH--GLAVSLAAGVACGAALGAINGVAIARLNVPPFVATLGMLSVAR 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                         G+            +              +    + +  + +    
Sbjct: 129 --------------GVTYIANDGSPVANLPDDYLSLGIGRLGPLGMPVLIFAGVALACWW 174

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                  R T        +  N+K+  +    +     S + VS A  G+AG   AA   
Sbjct: 175 VL-----RYTTYGRYLYAVGGNEKSARTSGIGVRKVVFSVYVVSGALAGLAGMILAARTT 229

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG   +        ++  +      +    +   
Sbjct: 230 SALPQAGASYELDAIAAVVIGGTSLSGGQGGVVGTLFGALLIGVINNGLNLLGVSSYYQQ 289

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 290 IAKGLIIVLAVLI 302


>gi|330837522|ref|YP_004412163.1| inner-membrane translocator [Spirochaeta coccoides DSM 17374]
 gi|329749425|gb|AEC02781.1| inner-membrane translocator [Spirochaeta coccoides DSM 17374]
          Length = 290

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 93/305 (30%), Gaps = 29/305 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G S+V   L   +         GA+    L +  G  +   + V
Sbjct: 6   LINGLALGSVYALIATGFSLVFNVLKFSNFAYGAMMTCGAFFGYFLSAANGWGLVPTLLV 65

Query: 99  SAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           + +     G++  + + +     +   I   + S     +L  +  +  G          
Sbjct: 66  AMVSGAVLGLLGQVIAFQRILNNNSSPIYFFVSSITLGTLLEGFVTLKVGANFYNYPRFF 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                          F    VI       + +        +   ++ T I  A R++  N
Sbjct: 126 ESST-----------FKIGSVIISKSDAMMFVLSAIALLLLAYVIKYTRIGRALRSVSFN 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +     +   +       F VS A  G++G F   +    +      S  +      ++G
Sbjct: 175 RDNASLMGINVTMIIRLTFMVSGALAGLSGVFLGINY---TLYPTLGSLVVKGFIASVIG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ SLS       +L  +      +    +  ++ F             + + + +L+R 
Sbjct: 232 GLGSLSGAVIGAVLLGMMETFLIHLIGSGYAPVVTF-------------LIMLVFLLVRP 278

Query: 337 HSLLR 341
             +  
Sbjct: 279 RGIAG 283


>gi|310815821|ref|YP_003963785.1| ABC branched-chain amino acid transporter family, inner membrane
           subunit [Ketogulonicigenium vulgare Y25]
 gi|308754556|gb|ADO42485.1| ABC branched-chain amino acid transporter family, inner membrane
           subunit [Ketogulonicigenium vulgare Y25]
          Length = 337

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 82/312 (26%), Gaps = 19/312 (6%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---------RYGLSIWLLIPVS 99
             + A G +++ G L           A G    +   +             +  L +P  
Sbjct: 26  LALGALGATLIYGILRFSHFGHGDNMAFGTMITIGFTNLLLGLGITFGPFPTALLALPFG 85

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++    ++M     +F     A   ++       + I    +  G     V       
Sbjct: 86  IIVTALMMLLMDRTVFRFYRRRRAAPVVMTMVSLGVMFIMNFVVRFGIGVDDVLFADGTR 145

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                   R +      +   +     ++      A +  +L RT    + R   DN+  
Sbjct: 146 FIIAAREFRDWSGLDEALSLRMTQVITVVTAAIAVALLFWFLNRTRTGKSLRAFSDNEDL 205

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                       +  + + +A    AG  +   +         F   + + +  ++GG+ 
Sbjct: 206 ALLSGINPDRVVMVTWIIVAALTTTAGVLYGLDKSF--KAFTYFQLLLPMFAAAVVGGLG 263

Query: 280 SLSKIAKATAILIGVVEL--------CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +         I+     +           +                     +    L +V
Sbjct: 264 NPLGAIAGGFIIAFSEVIVTYAWKKVLTYLLPDALAPAGLVQLLGTDYKFAVSFAILIIV 323

Query: 332 ILMRSHSLLRLR 343
           +L R   + R +
Sbjct: 324 LLFRPTGIFRGK 335


>gi|218551284|ref|YP_002385076.1| ribose ABC transporter permease [Escherichia fergusonii ATCC 35469]
 gi|218358826|emb|CAQ91483.1| D-ribose transporter subunit ; membrane component of ABC
           superfamily [Escherichia fergusonii ATCC 35469]
          Length = 321

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 89/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                     
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGRVQ--------AFIATLVM 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L+          G         + T        F +        +     ++G+ FL+A
Sbjct: 134 MLLLRGVTMVYTNG-------SPVNTGFTDNADLFGWFGIGRPLGVPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A       +   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNESATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|134097540|ref|YP_001103201.1| ribose ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291009497|ref|ZP_06567470.1| ribose ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133910163|emb|CAM00276.1| ribose ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 354

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 86/290 (29%), Gaps = 21/290 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFL----GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           L ++     LLAV    ++F           S   + ++   +    +   GL+ V+   
Sbjct: 36  LFRFQSFFGLLAVFVAAVVFSPRKDGEILFLSSDNLFNIIRAVSEIGIIGIGLTFVILIG 95

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+      + A    +L       +   + +  +     G++ G            
Sbjct: 96  G-IDLSVGSVLGLAAVGSAVLMINSDFGVLSTVSIVLLAGVVFGLLQGTAVSLLGVQAFI 154

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           +            L   +            + +                      +   +
Sbjct: 155 VT-----------LAGLQIARGLARMWSGGETVQISYGDGPDQAPMAFSLLGERTFGGVV 203

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
               L    ++ + IL+LR +A S     I  N+KA       +   K+ AF ++     
Sbjct: 204 PIPALIFAAVAVAAILFLRTSAYSRHLYAIGGNEKAARLSGVPVNRVKIIAFGIAGFCAA 263

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKAT 288
           +AG   A   +  SP+     E   + ++V+      GG  S+       
Sbjct: 264 LAGIVHAGQLNAGSPNDGIAYELDGIAAVVVGGTSLAGGRGSVIGTIAGA 313


>gi|126444414|ref|YP_001061462.1| ribose/xylose/arabinose/galactoside ABC-type transporter permease
           [Burkholderia pseudomallei 668]
 gi|126223905|gb|ABN87410.1| ribose/xylose/arabinose/galactoside ABC transporter, permease
           protein [Burkholderia pseudomallei 668]
          Length = 310

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/314 (10%), Positives = 87/314 (27%), Gaps = 29/314 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ V   ++L        + +    +  Q  I  + A G++ V+     + L+     
Sbjct: 12  IPIVFVALCVVLAFASPYFLTWRNWSDILRQTSINGILAIGMTYVI-LTKGIDLSVGSVL 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      + G+        +   + +  GA    +   ++        +ATL M  + +
Sbjct: 71  ALAGIVSGLAGAAGH--GLAVSLAAGVACGAALGAINGVAIARLNVPPFVATLGMLSVAR 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                         G+            +              +    + +  + +    
Sbjct: 129 --------------GVTYIANDGSPVANLPDDYLSLGIGRLGPLGMPVLIFAGVALACWW 174

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                  R T        +  N+K+  +    +     S + +S A  G+AG   AA   
Sbjct: 175 VL-----RYTTYGRYLYAVGGNEKSARTSGIGVRKVVFSVYVISGALAGLAGMILAARTT 229

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                    S  +  I+ V++GG         +        ++  +      +    +  
Sbjct: 230 SA-LPQAGMSYELDAIAAVVIGGTSLSGGQGGVVGTLFGALLIGVINNGLNLLGVSSYYQ 288

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 289 QIAKGLIIVLAVLI 302


>gi|221069668|ref|ZP_03545773.1| inner-membrane translocator [Comamonas testosteroni KF-1]
 gi|220714691|gb|EED70059.1| inner-membrane translocator [Comamonas testosteroni KF-1]
          Length = 289

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/291 (16%), Positives = 95/291 (32%), Gaps = 25/291 (8%)

Query: 53  AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112
           A GL+++ G +G+++L     Y IGAY    L    G     ++ V   ++   G  +  
Sbjct: 24  ASGLTLIFGIMGVINLAHGSFYMIGAYVAFSLAPYLGQHFITMLLVGVALAVVLGYFLEW 83

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
               F  +   +  ++M+     +    + I  G             G    + +     
Sbjct: 84  AFFSFLYERDHLQQVLMTYGLILVFEGLRAILVGNDVH---------GVEKPAWLAGSFP 134

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
               + Y  +  +       ++  +   + RT +    R    N+     L   I     
Sbjct: 135 LMGMMQYPWYNVFAAAACLLVALLMYYTVNRTRLGMMIRAGASNRDMVRGLGINIKRLYR 194

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             FAV  A   +AG   A             S  II   +V++GG+ S++    A+ ++ 
Sbjct: 195 IVFAVGVALAALAGMIAAPMSSV--YPNMGSSVLIICFVVVVIGGIGSITGALIASLLVG 252

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            V                     F       + + + ++++ R   L+  R
Sbjct: 253 FVDTFGKVF--------------FQELSGMSIYLLMAVILVWRPEGLMGKR 289


>gi|237653794|ref|YP_002890108.1| ABC transporter permease [Thauera sp. MZ1T]
 gi|237625041|gb|ACR01731.1| inner-membrane translocator [Thauera sp. MZ1T]
          Length = 288

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 106/304 (34%), Gaps = 28/304 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLSIWLLIP 97
           I +     L+  + A GL++V G +G+++L     Y IGAY ++ +      L + +++ 
Sbjct: 10  ILNALQYGLLLFLVASGLTLVFGIMGIINLAHGSFYMIGAYLAFALTSLTGNLMLAIVLG 69

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           +         +   L    ++ D+L    L    I     ++   + +   G+ + D   
Sbjct: 70  IPLAFGFGALLEKLLFVHLYKRDHLQQVLLTYGLILIFEELRSLTVGDDVHGVAIPDLFS 129

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                           S  + Y ++   + +    L+  +   ++RT +    R    N+
Sbjct: 130 ASIA-----------LSDNLSYPVYRLVISVVCIALAVGLWWLMQRTRLGMMIRAGSFNR 178

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +   SL   I     + FA+  A   +AG   A             +  II   +V++GG
Sbjct: 179 EMVQSLGVNIDLLYRTVFALGVALAALAGMLAAPISSV--YPGMGGNVLIISFVVVVIGG 236

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+     A  ++         +                      + + + +V+L R  
Sbjct: 237 IGSVWGALVAALLVGFADTFGTILLPELAG--------------LAVYLLMAVVLLWRPE 282

Query: 338 SLLR 341
            + R
Sbjct: 283 GIFR 286


>gi|16080648|ref|NP_391476.1| ribose ABC transporter permease [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221311550|ref|ZP_03593397.1| ribose ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315877|ref|ZP_03597682.1| ribose ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320790|ref|ZP_03602084.1| ribose ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221325076|ref|ZP_03606370.1| ribose ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|20141728|sp|P36948|RBSC_BACSU RecName: Full=Ribose transport system permease protein rbsC
 gi|1894758|emb|CAB07462.1| membrane transport protein [Bacillus subtilis subsp. subtilis str.
           168]
 gi|2636120|emb|CAB15612.1| ribose ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 322

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 51/324 (15%), Positives = 107/324 (33%), Gaps = 27/324 (8%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F   + K    L L  +V  +++ +   +      I ++  Q+ I  + A+G++ V+   
Sbjct: 15  FDGVMQKLGPFLGLFILV--IIVSILNPSFLEPLNILNLLRQVAINGLIAFGMTFVI-LT 71

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+     A+ +     +         L I +  +I    GMI GL   K +     
Sbjct: 72  GGIDLSVGAILALSSALVAGMIVSGVD-PVLAIILGCIIGAVLGMINGLLITKGKMAPFI 130

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
            ATL    +F+ + +                 +Y  G  +  L   + F      Y + +
Sbjct: 131 -ATLATMTVFRGLTL-----------------VYTDGNPITGLGTNYGFQMFGRGYFLGI 172

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
               + M      + + L +T        I  N+KA       +   K+  ++++     
Sbjct: 173 PVPAITMVLAFVILWVLLHKTPFGRRTYAIGGNEKAALISGIKVTRVKVMIYSLAGLLSA 232

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELC 298
           +AGA   +      P   +  E   + ++V     + GG   +        I+  +    
Sbjct: 233 LAGAILTSRLHSAQPTAGESYELDAIAAVVLGGTSLSGGRGRIVGTLIGVLIIGTLNNGL 292

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTT 322
             +    F  L+       +    
Sbjct: 293 NLLGVSSFYQLVVKGIVILIAVLL 316


>gi|90422356|ref|YP_530726.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90104370|gb|ABD86407.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 295

 Score = 62.6 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/316 (15%), Positives = 105/316 (33%), Gaps = 26/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           FL          + +     +  V+ A GL+I+ G L ++++     YA+GAY  + LG+
Sbjct: 2   FLDYIQFVLAPQMVTGLSLGMAVVLVALGLTIIFGLLDVINMAHGEFYALGAYLALALGA 61

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
                  L++ V  ++     ++      +             +   +++         G
Sbjct: 62  SGVSFWLLIVIVPLLMMPIGYVVERGLIQRV-----------FNMPDRHVTTLLLTFGLG 110

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                    ++   T   +           VI   +  +++     +  ++ + + +T  
Sbjct: 111 LVLEEGLKVVFGSTTQRPATPIPGAIEVMGVILPTYRMFLIALGAAIVIAVAIVVNKTRF 170

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R    ++    SL   +       FA   A  G+AG   A            F   
Sbjct: 171 GAMVRAAAFDRNMAASLGVPVERVFAGTFAFGVALAGLAGVLLAPIYSVFPTMGRDFI-- 228

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            +  ++VI+GGM S++    A  ++  V  L   +    ++  + F              
Sbjct: 229 FLAFTVVIVGGMGSIAGAVVAGLVITQVQALSSLVVSPVWSDPIVFS------------- 275

Query: 327 ALFLVILMRSHSLLRL 342
            + LV+++R   L   
Sbjct: 276 IMVLVLVLRPQGLFGR 291


>gi|293607061|ref|ZP_06689404.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292814551|gb|EFF73689.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 293

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/301 (15%), Positives = 96/301 (31%), Gaps = 21/301 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL+++ G +G+++L     Y IGAY    LG      +      +
Sbjct: 11  LNAFQYGLLLFLVASGLTLIFGIMGIINLAHGSFYMIGAYMAFALGPVVDRWLGGGFLAT 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             +       +G         YL           Q +L+ +  I   +    +       
Sbjct: 71  LAVCVLLAGALGYVLEAAFFSYLYH-----RNHLQQVLMTYGLILVFEELRSILVGNDVH 125

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G  +   ++        + Y ++  ++      ++  +   + RT +    R    N++ 
Sbjct: 126 GVPLPDWLQGSISLGGVMTYPVYRLFISAVGIAVALLLYWVISRTRLGMMLRAGASNREM 185

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             SL   +       FA   A   +AG   A                II   +V++GG+ 
Sbjct: 186 TGSLGIDVNKLYRLVFAAGVALAALAGTIAAPVSSV--YPGMGNGVLIICFVVVVIGGIG 243

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  ++  V      +              F      L+ + +  ++L +   L
Sbjct: 244 SIRGAFLAAMLVGFVETFGQVL--------------FPSAAGVLVYLLMAFILLCKPEGL 289

Query: 340 L 340
            
Sbjct: 290 F 290


>gi|316935590|ref|YP_004110572.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315603304|gb|ADU45839.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 288

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 93/304 (30%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       ++  + A GL++ +G +  ++L        G Y   +L ++ G      +P+
Sbjct: 7   LFDGVAYGMLLFVLACGLAVTLGLMNFVNLAHGAFAMAGGYVCAVLVNQAGWPFLAALPL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + S A G ++     +       +  ++ S     + +       G +          
Sbjct: 67  AFLASAAIGAVLERLLYRHLYARSHLDQVLFSVGLVFMSVAAVDYIMGSS---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                       +     V    +   +++    L+  + L L +T   +  R   D+ +
Sbjct: 117 RVFMQLPEALQGQIDLFGVGIGRYRLMIIVICGLLTVGLQLTLAKTRFGSRLRAAVDDPR 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       FA      G  GA  A          F     I  + +V +GG 
Sbjct: 177 VASGLGINVPQVFALTFAFGCGLAGFGGALSAEILGL--DPYFPLKFMIYFLIVVTVGGS 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S++    A+ +L                               ++   + ++++ R + 
Sbjct: 235 SSITGPFLASLLLGIGDVAGKYYLPKLGP--------------FVIYTIMIVILIWRPNG 280

Query: 339 LLRL 342
           L   
Sbjct: 281 LFGR 284


>gi|218547756|ref|YP_002381547.1| sugar ABC transporter membrane protein [Escherichia fergusonii ATCC
           35469]
 gi|218355297|emb|CAQ87904.1| putative sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia fergusonii ATCC 35469]
          Length = 358

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/313 (9%), Positives = 89/313 (28%), Gaps = 10/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  +V   +         S     +M   + I+ + A G+ ++V   G + L+     
Sbjct: 41  AFIALLVIIAVFSSLSPNYFSGANFLTMASHVAIFGLPAIGM-LLVILNGGIDLSVGSTL 99

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       +     +    ++    + + A   +     +      L    +    +  
Sbjct: 100 GLAGVCAGFMMQGINIEALGVVLYLPVWAVAILTLAVGALVGLVNGIL----IAWCRVPA 155

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +             + + + L +   +    +    F          +   +L +  ++
Sbjct: 156 FVATLGSLYVARGIALLITNGLTYNKLSGSESLGNTGFDWLGFNRIFTVPIGVLILGIVA 215

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    L +TA          N++A       +   K+S + +S     MAG   ++   
Sbjct: 216 LACGFLLSKTAFGRWLYASGGNERAAELSGVPVKRVKISVYVLSGICAAMAGLVLSSQLT 275

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG  ++        ++  + +    +    +   
Sbjct: 276 SAGPTAGTTYELTAIAAVVIGGAALTGGRGNVRGTLLGAFVIGFLSDGLVIIGVSAYWQT 335

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 336 VFTGAVIVLAVLL 348


>gi|310642287|ref|YP_003947045.1| ribose abc transporter, permease protein rbsc [Paenibacillus
           polymyxa SC2]
 gi|309247237|gb|ADO56804.1| Ribose ABC transporter, permease protein RbsC [Paenibacillus
           polymyxa SC2]
          Length = 322

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 96/300 (32%), Gaps = 25/300 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
               +      I ++  Q+ I  + A+G++ V+   G + L+     A+ +     +   
Sbjct: 37  ALNPSFLEPLNILNLLRQVSINALIAFGMTFVI-LTGGIDLSVGSILALSSAFVANMMLV 95

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                 L I +   + G  GM+ GL   K +      ATL    IF+ + +         
Sbjct: 96  GFD-PILAIIIGCALGGVMGMVNGLMITKGKMAPFI-ATLATMTIFRGLTL--------- 144

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                   +Y  G  +  L     F      Y+  +    + M    A + + L +T   
Sbjct: 145 --------VYTNGNPITGLGDSLVFQLFGRGYQFGIPVPAITMLITFAVLWIILHKTPFG 196

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                I  N+KA       +   K+  ++++     +AGA   +  +   P      E  
Sbjct: 197 RKTYAIGGNEKASIVSGIKVPRVKIWIYSLAGMLSALAGAILTSRLNSAQPTAGTSYELD 256

Query: 268 IVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V     + GG   +        I+  +      +    F  ++       +    
Sbjct: 257 AIAAVVLGGTSLSGGRGRIVGTLIGVLIIGTLNNGLNLLGVNSFYQMVVKGIVIAIAVLI 316


>gi|269140855|ref|YP_003297556.1| ribose ABC transporter permease protein [Edwardsiella tarda EIB202]
 gi|267986516|gb|ACY86345.1| ribose ABC transporter permease protein [Edwardsiella tarda EIB202]
 gi|304560614|gb|ADM43278.1| Ribose ABC transport system, permease protein RbsC [Edwardsiella
           tarda FL6-60]
          Length = 326

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 96/312 (30%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 27  LIALLVLIAVVSSMSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +   G    + +      ++A   +++      
Sbjct: 86  LTGAVAASIVGMDVNALVAVGAALALGAAIGGCTGVIVAKGKVQAFIATLVMML------ 139

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G   +Y        G + ++ +  +      +     ++ +++      A
Sbjct: 140 -------LLRGVTMVYTDGSPVNTGFSAQADLFGWFGIGRPLGMPTPIWLMIVVF----A 188

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L  T +      +  N+ A      ++   K++ +A+      +AG    A    
Sbjct: 189 LAWYMLHHTRLGRYIYALGGNEAATRLSGISVDRVKIAVYALCGLLSALAGVIEVARLSS 248

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 249 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIMGTLIGALILGFLNNGLNLLGVSSYYQMI 308

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 309 VKAAVILLAVLV 320


>gi|261491666|ref|ZP_05988248.1| D-ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261312681|gb|EEY13802.1| D-ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 324

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 88/311 (28%), Gaps = 23/311 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  +++ +      S   I ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 22  FVALFILIVIVSMINPDFFSVDNILNILRQTSVNAIIAVGMTFVILIAG-IDLSVGSVLA 80

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L       + ++  V  + +   G+   + +                + F  
Sbjct: 81  LTGAVAATLVGSELPILLVIPLVLLLGTAFGGISGAIVAK------------GKVQAFIA 128

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +          F      Y   +   +  M  +  
Sbjct: 129 TLVTMTLLRGITMVYTDGRPISTGFSDQADA-----FAFIGTGYLFGIPVPIWIMAVVFG 183

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L+ T I      +  N+ A       +   K+  FAVS     +AG    +    
Sbjct: 184 LVWYILKHTPIGRYIYALGGNESATQLSGINVNKIKIFVFAVSGFLSALAGLIVTSRLSS 243

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+     +GG   +        I+  +      ++   +  ++
Sbjct: 244 AQPTAGVSYELDAIAAVVVGGTSLMGGKGRVMGTLVGALIIGFLNNALNLLDISSYYQMI 303

Query: 311 KFDCSFNMRHT 321
                      
Sbjct: 304 AKALVILAAVL 314


>gi|268591931|ref|ZP_06126152.1| ribose ABC transporter, permease protein [Providencia rettgeri DSM
           1131]
 gi|291312320|gb|EFE52773.1| ribose ABC transporter, permease protein [Providencia rettgeri DSM
           1131]
          Length = 323

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 95/322 (29%), Gaps = 27/322 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLG-ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +L K    L L+ ++   +          +   + ++  Q+ I  + A G++  +   G 
Sbjct: 18  KLTKIPAFLPLVGLILLFVCMSIFNEHFLTVNNLSTIARQVSINAIIAIGMTFAI-LTGG 76

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+       L   YG+  +  I +  +   A G I G+ +   +   + + 
Sbjct: 77  IDLSVGAVMALSGTLMAGLMKYYGMDPYAAIALGLLSGVAFGFINGILAAYGKMPPIIVT 136

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
              M       LI          G  V+          R  +   + P   ++    ++Y
Sbjct: 137 LGAMIIAKGLALIY-------TGGYPVSGLPQEFAFWGREELMGIQVPILLMLGLYLIFY 189

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           V+L                        I  N++A       +   K+  + +S      A
Sbjct: 190 VVLNHVS-------------FGRYIYAIGGNEEAARLSGIRVERYKMLVYVISGFTAAFA 236

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCG 300
           G  F +      P+     E   + ++V     I GG   +        IL  +      
Sbjct: 237 GLIFTSRVMSGQPNAGVGFELDAIAAVVLGGASIAGGRGMIIGTLIGAMILGVLNNGLNL 296

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +    +   +            
Sbjct: 297 LGISPYVQYIVKGLIIWGATLI 318


>gi|209515134|ref|ZP_03264002.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209504388|gb|EEA04376.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 291

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 75/301 (24%), Gaps = 26/301 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                IY + A G +++  + G ++        + A+  +   S              + 
Sbjct: 12  MATGSIYALAALGFTLLWQASGTVNFAQGEFVMLPAFVMLGFISVGLPLYLAFPATCVIA 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G             +  +  ++ +                                
Sbjct: 72  IVVLGWAFKRGVADPLLKFGMMPVVVATIGLSIAARNGIRAGVAAEAQP----------- 120

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             SL     +  + V   +     L     L  +   +L RT    A + +  N ++   
Sbjct: 121 FPSLFADRIYHVAGVSLSLANVGTLAIALLLVLATQAFLTRTVTGRAMQAVAQNTESAMV 180

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   +    L  FA+++     A          ++      S  I      I+GG     
Sbjct: 181 LGINVPRMVLYTFAINAVLACTAALLITP--TYLAKFDMGESLGIKAFFAAIIGGFNDSR 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  I+     L        +   +               +   +VIL++   LL  
Sbjct: 239 GALLGGIIVGVCENLASAYISPAYKDAVAL-------------VIFMIVILVKPQGLLGR 285

Query: 343 R 343
           R
Sbjct: 286 R 286


>gi|317401364|gb|EFV82000.1| branched-chain amino acid transport system permease [Achromobacter
           xylosoxidans C54]
          Length = 309

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 95/305 (31%), Gaps = 16/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y +   G  ++  + G+ +        + A S                 + A +
Sbjct: 12  LMSGMLYALIGLGFVLIFKASGVFNFAQGAMVLVAALSMARFSEWLPRWFGFENMILANV 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN----GKAGIYVADRLYF 158
                  + +  L    +   +  L+  E    ++            G+     +     
Sbjct: 72  LAFIVSAIVMFLLAVAIERFVLRHLVNQEATTLLMATLGISYFLDGLGQIAFGSSVYSIN 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G     L+         ++  +      +    L A++ L+ + T+   A R + D+ +
Sbjct: 132 VGMPKDPLMILDSVFEGGLLINLEDLTAAVIAALLVAALALFFQFTSTGRALRAVADDHQ 191

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +    +  ++V+     +AG  + +            +  +  + +VILGG+
Sbjct: 192 AAQSIGIPLNRIWVIVWSVAGLVALVAGIIWGSKFGVQFTLS---TAALRALPVVILGGL 248

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+    +L            ++   +          +   + +L R   
Sbjct: 249 TSVPGAILGGLIIGVGEKLSEVYLGSLVGGGIEIWFA---------YVLALVFLLFRPQG 299

Query: 339 LLRLR 343
           L   +
Sbjct: 300 LFGEK 304


>gi|90424446|ref|YP_532816.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90106460|gb|ABD88497.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 291

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 93/265 (35%), Gaps = 12/265 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+++ G L +++      Y +GA++   L + +G+  W  + +
Sbjct: 12  LLVGLINGSFYALLSLGLAVIFGMLNIINFAHGALYMMGAFAAYFLLNVFGIGYWWALII 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +  G  G+I+    L++      +  L+++     I+        G +G+  A     
Sbjct: 72  APLAVGLFGIILERTMLQWIAQLDHLYGLLLTFGLGLIIQGVFQNYFGSSGLPYAIP--- 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                            F+   ++  +V++    +  +    + RT +    R   +N  
Sbjct: 129 -------EELRGGINLGFMFLPVYRGWVVVFSLVVCLATWYLIERTRLGANLRAATENPT 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       + +      +AG   A         +      I+V ++V++GGM
Sbjct: 182 LVRAFGINVPRMITLTYGLGVGLAALAGVLSAPINQV--RPLMGADLIIVVFAVVVIGGM 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNF 303
            S+         L  +  L      
Sbjct: 240 GSIMGSIITGFALGIIEGLTKYFYP 264


>gi|332968349|gb|EGK07418.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Desmospora sp. 8437]
          Length = 316

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 91/312 (29%), Gaps = 27/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L   V  + L L      S   I ++  QI I  + A+G++ V+   G + L+     A
Sbjct: 21  LLGLGVIVVALSLISRDFLSITNIFNVLRQISINALLAFGMTFVI-LTGGIDLSVGSILA 79

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + +   +  +L I          G + G    K R      ATL    +F+ 
Sbjct: 80  LSGALSAGMLASG-MDPFLAILTGLAAGALMGAVNGALVTKGRVAPFI-ATLATMTVFRG 137

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                                 F      Y + +   ++ M     
Sbjct: 138 LTL-------------------VYTEGRPIAYESDLFSMLGKGYFLEIPIPVIWMLISFL 178

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L+ T        I  N++A           K+  +A+S  F  +AG    A  + 
Sbjct: 179 ILYFVLKNTTFGRHVYAIGGNEEAAVLSGIRTHRVKVWVYAISGLFASLAGIILTARLNS 238

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++VI      GG   +        I+  +      +N   F   +
Sbjct: 239 AQPTAGTSYELDAIAAVVIGGTSLSGGRGWIVGTLIGAMIIGVLDNGLNLLNVSSFYQQV 298

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 299 VKGGVILLAVLL 310


>gi|330976759|gb|EGH76797.1| inner-membrane translocator [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 290

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 78/288 (27%), Gaps = 17/288 (5%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 17  ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAAIGMA 76

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 I   +     + +L  W         + +A     +       +         +
Sbjct: 77  LER--TIIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 134

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 135 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 194

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
            S   G+ G   A S+          S  I    +V+LGG+  L+    A   L    ++
Sbjct: 195 GSGIAGLGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVMAAFGLGIANKI 252

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                      +L                        R   L  L+  
Sbjct: 253 LEPQIGAVLGKILILALIILFIQK-------------RPQGLFALKGR 287


>gi|330958780|gb|EGH59040.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 380

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 82/332 (24%), Gaps = 40/332 (12%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------------ 84
            +   +  + L     A G+ ++ G  G+LSL   I + +G+Y   +             
Sbjct: 52  DFRLGLAGKYLSLAFCAVGMVMIWGYGGILSLGQGIFFGLGSYMMAMYLKLEATATDEAA 111

Query: 85  ----GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                         +I  S              +       +  A L     +     + 
Sbjct: 112 SALAAFYGSALPDFMIWNSVEALPWWWKPFESATFTLAAILILPALLAFLFSYAYFKKRV 171

Query: 141 KPITNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             +                I            +      F            +Y +   +
Sbjct: 172 GGVYFSIITLSLASIMSIMIIGQQGYTGGVNGLTDFKTVFGLSLQTQQTPWILYLITTLL 231

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              S ++  ++ R+ +      IRD +             K   FAV++    + G  F 
Sbjct: 232 LLASVAMCGFILRSRLGKVIVAIRDREDRVRFSGYNTALFKAFIFAVAALISALGGVMFT 291

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                 SP +     +  ++    LGG  SL      T ++                   
Sbjct: 292 LQVGLASPSLVGIIPSTEIVIYAALGGRLSLVGAVYGTLLIGAAKTYLSE---------- 341

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +F       +      V+L     L  L
Sbjct: 342 ----NFVSFWQYFIGFLFMGVVLFLPTGLAGL 369


>gi|319764466|ref|YP_004128403.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|317119027|gb|ADV01516.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
          Length = 306

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 79/305 (25%), Gaps = 20/305 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV----ILGSRYGLSIWLLIPV 98
                IY + A G +I   +   L+         GA+  V    +L  +      L   V
Sbjct: 13  LALGSIYALVAVGFNITFNTTKTLNFGQGEFLVAGAFVAVSVLLLLAGKQMTDALLPSEV 72

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +                         A            +                    
Sbjct: 73  TLTRYLLSLAGSMAVLALLGVLLYYTAVRPFVGQGGMAWVMSTIGFGIIIQNTALAIWGP 132

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + S +                  VL+    +  ++   +R T I  A R +  N  
Sbjct: 133 SPLVMPSPLGNDVIRIGGAGVLPQEVLVLVASVAVLLTLDWVMRATRIGKAVRAVAQNGS 192

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    + AF +SS+  G+AG   A             +  +   S  I+GG+
Sbjct: 193 TATLMGINVGAIVVLAFVISSSLAGLAGLLIAPITTA--SVFMGLTLALKAFSSAIVGGL 250

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS         +L  +  L                          + I + +V+++R   
Sbjct: 251 TSPRGCMLGGFLLGVIEALV--------------GLWHAELREISIFILIIVVLVVRPQG 296

Query: 339 LLRLR 343
           LL  R
Sbjct: 297 LLGQR 301


>gi|332159634|ref|YP_004296211.1| ribose ABC transporter permease protein [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318603728|emb|CBY25226.1| ribose ABC transport system, permease protein RbsC [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325663864|gb|ADZ40508.1| ribose ABC transporter permease protein [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330861801|emb|CBX71974.1| ribose transport system permease protein rbsC [Yersinia
           enterocolitica W22703]
          Length = 321

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 90/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAVVSSLSPNFFTLNNMFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +   G+   + +                + F  
Sbjct: 82  LTGAVAASIVGLEVNALVAVGAALALGAFVGGITGVIVAK------------GKVQAFIA 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T V     +F      +   + +   +  M  +  
Sbjct: 130 TLVMMLLLRGVTMVYTNGSPINTGFTDVADTFGWFG-----IGRPLGIPTPIWLMAIVFI 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 185 AAWYMLHHTRLGRYIYALGGNESATRLSGISVDKVKIIVYSLCGLLAALAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|85706505|ref|ZP_01037598.1| probable amino-acid transmembrane lipoprotein abc transporter
           [Roseovarius sp. 217]
 gi|85668917|gb|EAQ23785.1| probable amino-acid transmembrane lipoprotein abc transporter
           [Roseovarius sp. 217]
          Length = 293

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 100/304 (32%), Gaps = 24/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   IY + A  +SI   SLGL++L     ++   Y   ++      +  L+   
Sbjct: 7   LTNAIIVACIYGLIAIAVSITWSSLGLINLAYGFIFSFAGYGAWMMAEYVTENPALVAAT 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +    G+I+ L       D     T  M       LI  +                 
Sbjct: 67  GIAVGALGGVIVCLTVFIPLHDKPNFTTRGMIATLAISLIGSQAF---------LMYFGP 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +  +  F++     +        +++    + A ++ W+R +      R +  N  
Sbjct: 118 RPKALPEIFGFWKVDFLGITLTSDKIGIVVCSIAMLAVVVFWMRGSRRGLEIRAMMMNPH 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   I    +   A++ A  G+A    + +           +  I  +SI + GG+
Sbjct: 178 AAAIVGIGIRSTGVYVMAMTGAMAGLAAILLSQTYYI--SPFSGLTPLIKGVSIALCGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  +L  V  L        +  + +F             + + +V+++R   
Sbjct: 236 GSVQGAVIAAILLGLVEALTNQFLGGQYVLMTQF-------------LVIIMVLIVRPRG 282

Query: 339 LLRL 342
           +  L
Sbjct: 283 ISGL 286


>gi|147514|gb|AAA51474.1| high affinity ribose transport protein [Escherichia coli]
          Length = 321

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 90/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                   Q 
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        +     ++G+ FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A       +   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYAVGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|294677966|ref|YP_003578581.1| branched-chain amino acid ABC transporter permease LivM
           [Rhodobacter capsulatus SB 1003]
 gi|294476786|gb|ADE86174.1| branched-chain amino acid ABC transporter, permease protein LivM-2
           [Rhodobacter capsulatus SB 1003]
          Length = 323

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 57/333 (17%), Positives = 129/333 (38%), Gaps = 22/333 (6%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +   L  +Y  +  L     +   Y     + +L        L+     +G +++ 
Sbjct: 3   RAVSLAAFLLALYIGVPGLIALTGRWDFYYTLTSVALLSIGSAGVWLTF---YIGRINIG 59

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                  G Y   IL ++ G++ W  +P++ +      +++GLP L+ RG Y ++ TL++
Sbjct: 60  QGAYALAGGYVAAILITKLGVNFWATLPLAGLFCAGLAVLIGLPILRLRGVYFSMVTLVL 119

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +E+ +   +          G      +   G      +      ++    ++  Y + + 
Sbjct: 120 TEVARLSALALPI----TNGARGITSIPLPGEVSVFGLVLIPDFATLENPKLAFYLMAVT 175

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+  ++  L R+ + + +R+++ N+    S+   I   ++ A+A+SS   G+AGA F
Sbjct: 176 LMCLAYLVLWRLTRSRLGHLFRSLQQNEDLAASIGVNIALLRVLAYAMSSFMGGIAGAGF 235

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                 I P  F+ ++++  +    LGG+  +      T +L     L            
Sbjct: 236 VVISQSIYPSSFQVADSVNFMLNCFLGGLGFVFGPMLGTLVLYFGWSLL----------- 284

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                +       +    L   +L+  + LL L
Sbjct: 285 ----FAAAKYQMLIYSTLLIAAMLVVPNGLLSL 313


>gi|331270088|ref|YP_004396580.1| ribose ABC transporter permease [Clostridium botulinum BKT015925]
 gi|329126638|gb|AEB76583.1| ribose ABC transporter, permease protein [Clostridium botulinum
           BKT015925]
          Length = 311

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 104/327 (31%), Gaps = 31/327 (9%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           + F   + KY  +L  L +   + +        S   I ++  Q+ +  + A G++ V+ 
Sbjct: 3   NNFKNIIMKYKALLGFLVLCVVMAIL--SPRFLSVANIKNVLTQVSVNAIIAIGMTFVI- 59

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G + L+     AI   +      +   +I++ I  + ++    G++ GL   K R   
Sbjct: 60  LTGGIDLSVGSTLAISG-AVAATLIKANCNIFVAIIAALVVGVIVGLVNGLFIAKGRIQA 118

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                  M+                        ++Y  GT V  L   F    +  +  I
Sbjct: 119 FIATLATMTV------------------FRGVTQVYTNGTPVSKLGESFGNIGNKELLGI 160

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
               ++  + FL A  +L   R         +  N+ +           K+  + +S   
Sbjct: 161 PFPVIITIVVFLIAFYVLNETRG--GRYIYALGGNEDSARLSGINTTKMKMLVYIISGVT 218

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVV 295
             ++G    +     S         +  I+ V+LGG        S+S       I+  + 
Sbjct: 219 AAISGVVVTSRIGSASAIA-GTGYELDAIAAVVLGGTSLSGGEGSISGTIIGALIIGVLN 277

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                +N   +  L+       +    
Sbjct: 278 NGLNLLNVSPYYQLIVKGLVILLAVMV 304


>gi|297198525|ref|ZP_06915922.1| inner-membrane translocator [Streptomyces sviceus ATCC 29083]
 gi|197716189|gb|EDY60223.1| inner-membrane translocator [Streptomyces sviceus ATCC 29083]
          Length = 348

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/318 (9%), Positives = 87/318 (27%), Gaps = 15/318 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              + V   L   L  G+ +    +      + +  +   G+++ +   G+  ++     
Sbjct: 34  FIFVTVALFLYFALSEGSFRESATLLDTLRYVSVAAILGLGVTLTMAVGGM-DMSVGAVA 92

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G          +     + I          G++  L  +  +          M     
Sbjct: 93  GLGVSVAAQTMVVFNQVGTVAIIAVLAAGALAGLLNALLIVVLKIPD-------MLATLG 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +          G  +   +     +         F        + +   +L    L+
Sbjct: 146 TMFVIQGSKLILVDGQSITPGMTMDDGSTAPGRFTAGFLKIDRGTVLGIPISVLVFGGLT 205

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +  ++L RT        I  N +A       +   +  A+ +S     + G   A+   
Sbjct: 206 IAAWVFLARTRWGRVLYAIGANPEASRLAGIRVGAYRALAYVLSGVLASIGGLILASRIG 265

Query: 255 RISPDMFKFSENIIVISIVILG------GMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +        S+ +  +++ ++G      G  ++   A    ++  +          Y+  
Sbjct: 266 Q-GDVSAGTSQLLEAVAVALVGTSVLGRGRPNVWGTALGAVLIGIITTGLTIKGLPYYTQ 324

Query: 309 LLKFDCSFNMRHTTLMVI 326
            +       +       +
Sbjct: 325 DVVEGAVLILALVFSFTL 342


>gi|171057481|ref|YP_001789830.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
 gi|170774926|gb|ACB33065.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
          Length = 306

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 88/297 (29%), Gaps = 16/297 (5%)

Query: 51  MFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIM 110
           + A GL++V G +  ++L     Y +GAY+  I     G  +  ++           ++ 
Sbjct: 22  LLAAGLTLVFGIMSFVNLAHGSLYMLGAYAAAIAYDATGSFVLAILAAMGTALLIGLVLE 81

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                +          L    +        + +                       +   
Sbjct: 82  VSIVSRLYRRDHLDHVLATFGLVMFFNEMVRMVWG-----------PQPLFVQVPEVLSG 130

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                   Y  + + ++     ++    L + +T I    R    N +   +L   I   
Sbjct: 131 TVDIVGFSYPSYRFAIIFTGLLVAVGSHLLINKTRIGMLIRAGAQNPQLVGALGVNIGLL 190

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
               F V +   G+AGA                   I  + ++++GG+ S+S    A  I
Sbjct: 191 NAMLFGVGAMLAGLAGAMAGPVLSV--QSGMGEPVLITTLVVIVIGGIGSVSGALYAALI 248

Query: 291 LIGVVELCCGMNFYYFNSLLKFDC---SFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           +  V  L           + +      +     +  + + + LV+ +R   L   R 
Sbjct: 249 VGLVDTLGRVFLPLLLRQVAERSIADAAGPALASMSIYLLMALVLALRPQGLFPARR 305


>gi|159900319|ref|YP_001546566.1| inner-membrane translocator [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893358|gb|ABX06438.1| inner-membrane translocator [Herpetosiphon aurantiacus ATCC 23779]
          Length = 315

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 79/279 (28%), Gaps = 8/279 (2%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           ++            +        IY M + GLS++ G + +L+      + +G Y     
Sbjct: 1   MVAPASWPKLITGILLPGLTLAAIYFMISAGLSLIFGLMDVLNFAHGSLFMLGGYCAWTC 60

Query: 85  GSR------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
                        I +       I G     +   ++    +   I  L    I+Q +L 
Sbjct: 61  NVWLDPNYAGHWPITIASGNLRFIIGLIVGTLVGAAVGSLIEISLIRPLYKRPIYQVLLT 120

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                        +          ++  +           +  +  +++     L+  I 
Sbjct: 121 LGLVFVFDALVRTIPAWGSLSRAPIKPPMLTESLSLLGRRFPSYSLFLICLSVSLAVLIA 180

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           L LRR+ I    R    +     ++   +       F   S    + GA  A+       
Sbjct: 181 LVLRRSRIGLTIRAGVQDSAMVEAMGINVRRVFTGVFGFGSGLAALGGAVAASFIGV--Y 238

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
                   +    +V++GG+ S S  A    ++      
Sbjct: 239 PEMGLEYQLFAFIVVVIGGLGSYSGAAAGALLIGLARTF 277


>gi|114769129|ref|ZP_01446755.1| inner-membrane translocator [alpha proteobacterium HTCC2255]
 gi|114550046|gb|EAU52927.1| inner-membrane translocator [alpha proteobacterium HTCC2255]
          Length = 307

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 112/306 (36%), Gaps = 15/306 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + + GL++V G +GL++L     Y IGA       + +  S WL +  
Sbjct: 10  VLNGLQFGVMLFLMSAGLTLVFGVMGLINLAHGSLYMIGA-FAAAAIASWTGSFWLGLVA 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S M +   G+I+ +  ++          L   +    +L  +  I      +      + 
Sbjct: 69  SLMAAAIAGVIVEIVIIRR---------LYKRDHLDQVLATFALILLFSEAMRWIFGAFP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   V  ++         + Y  +   +++    ++  +   + +T +    R    +++
Sbjct: 120 LFLDVPEILSGTLSLPLGIEYSKYRMMIIVVGILIAVGLFSLISKTRLGVRIRAGESDRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+
Sbjct: 180 MIAALGVDISKLYTLVFALGAALAGLAGAMVGAIQSV--EVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335
            S+        ++     L   +   +F   L    +    +   + ++ I +  V++ +
Sbjct: 238 GSIKGALVGAILVGLTDTLGRFLLPSFFKIFLNPSSATDIGSALSSMMIYILMAAVLIWK 297

Query: 336 SHSLLR 341
              L  
Sbjct: 298 PSGLFG 303


>gi|312199446|ref|YP_004019507.1| inner-membrane translocator [Frankia sp. EuI1c]
 gi|311230782|gb|ADP83637.1| inner-membrane translocator [Frankia sp. EuI1c]
          Length = 966

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 89/287 (31%), Gaps = 10/287 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
                +Q +   + A G+ +V  S  +++        +G+  + +L  RY +  W+ + +
Sbjct: 9   WLDGAVQGMAIGLLAIGVVLVYRSSRVINFAVANMGLVGSVLFAVLVVRYHVPYWVALVL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +  G  G  + L  ++       +  L+ +                       +  ++
Sbjct: 69  GLLAGGLFGAAVDLAIIRRLFHAPRVIVLVATIGVAQFAQMIV--------TAYPNLDHY 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G +          P S +        V++ +   + ++   L RT +  + +   DN +
Sbjct: 121 SGASYPLPWGGSWSPVSGIAVTGDHLAVVVAVPLTAGALAFVLNRTVLGKSVKAAADNSE 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP-DMFKFSENIIVISIVILGG 277
                  +        +A + A   ++    +A    +S       +  +  +   ++G 
Sbjct: 181 LARLQGISPRRISTVVWAGAGALGTLSMILISAQGQAVSTITSVGPTTMVRALVAALIGR 240

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
           M S         I +G+ E     N+     L        +      
Sbjct: 241 MVSFPIALL-AGIGVGLFETVVTYNWPNVPGLTDALLLVIVLAAVFF 286



 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 110/287 (38%), Gaps = 8/287 (2%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +    +L + L    ++     +   IL Y +    ++++ G  G LSL  +        
Sbjct: 325 LALLGVLAIVLPLVVTEPSRHLLYTIILCYAICGASVTLLTGWAGQLSLGQMAFAG---- 380

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              ++ +     +   +  S +   +    + + +       LA    + +   + +L+ 
Sbjct: 381 LGALVAAALHRGLSFKVGGSEVALRSLPFPVAVLAAALVTAVLAAVVGVGALRVRGLLLA 440

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY--EIFMYYVLLGMCFLSASI 197
                 G A +     L FL     S   F R     +    +   YYV+L +  +  ++
Sbjct: 441 VSTFAFGVAALKYLYNLSFLQDKGTSTASFLRDSVFGIDISSQRAYYYVVLVVLAVVMAV 500

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  LR++ ++     +RDN     +        KL AF ++    G+ GA  A +   + 
Sbjct: 501 VARLRKSGVARTTIGVRDNPAGAAAYTVVGARVKLRAFTLAGFIAGLGGALLAGAVQSVP 560

Query: 258 PDMFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
                +   ++++++S+V++GG+ S+         ++G+     G++
Sbjct: 561 YTERYYLPADSLVLVSVVVIGGLGSVYGPLLGALWVVGLPSFMPGIS 607


>gi|121605357|ref|YP_982686.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120594326|gb|ABM37765.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 308

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 93/306 (30%), Gaps = 16/306 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + A GL++V G +  ++L     Y +GAY+  ++G R       ++  
Sbjct: 10  LLNGLQYGVMLFLLAAGLTLVFGIMSFVNLAHGSMYMLGAYAAAVVGVRTDSFALGVLAA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                    ++  L   K          L    +        + I               
Sbjct: 70  VVTGGVVGLVLEKLAVSKLYRRDHLDHVLATFGLVLFFNEVVRMIWG-----------PQ 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                               Y  + + +++    ++A     + +T +    R    N +
Sbjct: 119 PMFVSLPESLSGTVEFLGFTYPSYRFLIIVVGLLVAAGSQWLIHKTRVGMLIRAGSVNPQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ SA   +AGA                   I  + ++++GG+
Sbjct: 179 IVAALGVNIKLLNAMLFALGSALAALAGAMAGPILSV--QSGMGEPVLITTLVVIVIGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYY---FNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
            S+     A  I+  V  L           F      + +     + L+ + + +++  R
Sbjct: 237 GSVRGALYAGIIVGLVDTLGRTFLPMLIRVFADREIANAAGPALASMLIYLLMAVILAWR 296

Query: 336 SHSLLR 341
              L  
Sbjct: 297 PQGLFP 302


>gi|330888013|gb|EGH20674.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 196

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 54/180 (30%), Gaps = 14/180 (7%)

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             +      F  S       ++   + +   S  I   L ++        +RD +     
Sbjct: 24  FTNFRSILGFSISSQGTRATLFLATVLLLIASLYIGWRLAQSKFGRVLTALRDAENRLMF 83

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                   KL  + +S+   G+AGA +      I+P     + +I     V LGG  +L 
Sbjct: 84  CGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINPSEMSPTNSIEAAVWVALGGRGTLI 143

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  ++ G+                 F  +F       +     +V L     ++ L
Sbjct: 144 GPLLGAGLVNGMKSW--------------FTVAFPEYWLFFLGALFIIVTLYLPKGVIGL 189


>gi|317405431|gb|EFV85743.1| inner-membrane translocator [Achromobacter xylosoxidans C54]
          Length = 306

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 92/294 (31%), Gaps = 16/294 (5%)

Query: 53  AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112
           A GL++V G +  ++L     Y +GA+    +    G  +     V A ++    ++  +
Sbjct: 24  AAGLTLVFGIMNFINLAHGSLYMMGAFIAATVFRHSGSFLLAAAAVVAGMALLGLLLDRI 83

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
              +          L             + I                 +           
Sbjct: 84  ALARLYPREHLDQVLATFGFILFFNELTRIIWG-----------PAPLSMGLPSWLSGTI 132

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
               V Y ++ + +++    ++A     + RT +    R    ++    +L   I     
Sbjct: 133 DLLGVTYPLYRFLIIVAGLAVAAGCYALIHRTRLGMLIRAGSTDRMMVGALGVNIARLNT 192

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             F + +   G+AG                    I+ + ++++GG+ S+     A  ++ 
Sbjct: 193 LLFVLGAVLAGVAGLMAGPILSA--QTGMGEPILILTLVVIVIGGIGSVRGAFLAALMVG 250

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHT---TLMVIALFLVILMRSHSLLRLR 343
            V  L   +      + L    +          L+ I + LV+ +R   L  +R
Sbjct: 251 LVDTLGRALLPALLRAALPPAAANAAGPAIASMLIYIVMALVLALRPQGLFPVR 304


>gi|223938148|ref|ZP_03630045.1| Monosaccharide-transporting ATPase [bacterium Ellin514]
 gi|223893192|gb|EEF59656.1| Monosaccharide-transporting ATPase [bacterium Ellin514]
          Length = 379

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 85/306 (27%), Gaps = 24/306 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             + + +  +        + A G + V+   G + L+    YA+ +    ++  R G   
Sbjct: 76  FLNAQNLAQVAKDTSFIAIMAVGATFVI-ISGGIDLSVGAIYALASVLGALVLQRCGPEG 134

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
                   +      +     ++        +   +    F   L     +      I  
Sbjct: 135 AHAGLSPWISVSLGMLACVGTAVLCGFLNGGMIVALRVHPFIITLGTMAILRGVAFVITK 194

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
              +       R LIR+       ++  + M  V +      A       R A       
Sbjct: 195 GQSIGGFPQAFRDLIRWEIGDGLSLVPLVVMIIVTIVGGIYLA-------RLATGRRVYA 247

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N+ A       +   KLS + +S    G+A           +    +  E  ++ + 
Sbjct: 248 IGGNELASKFSGIQVNRVKLSVYIISGLTAGIAALLSIGYYGGATSGDGQGYELNVIAAA 307

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           V+      GG  S         ++  +              ++      N     + ++ 
Sbjct: 308 VVGGASLAGGKGSALGALLGALVIQLITT-----------GIVILQIDQNYSQIIMGIVV 356

Query: 328 LFLVIL 333
           +  V+L
Sbjct: 357 IVAVVL 362


>gi|116749714|ref|YP_846401.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
 gi|116698778|gb|ABK17966.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
          Length = 285

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 90/307 (29%), Gaps = 27/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +  +IY + A G+S+VVG + +++      Y +  Y   +     G++    + V
Sbjct: 6   VMNGLVIGVIYALAALGVSLVVGIMNVVNFAHGELYILAGYFSYLFAGALGVNFVAAMIV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G+ +    ++        + LI++ I   +L     +  G            
Sbjct: 66  AVLLVFLFGLFVEWVLIRPTYGNDMYS-LILTFILSIVLQNAYLLIFGP----------- 113

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +           Y       L     + A + + +++T      R    +++
Sbjct: 114 YPNKPPGWVGGATNVFGLFYYGNQRLAALAAASVVIALLFVVIKKTWFGRIIRATSQDRE 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                        + +F +  A    AG   A                +    +V+LGGM
Sbjct: 174 MAELNGVNTTRLNMLSFGLGCALAAAAGVILAPVFPV--TPTAGLPVALTAFVVVVLGGM 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL  V  L        +  L  F     +                R   
Sbjct: 232 GSLWGCVLGGLILGLVENLGAAFISTGYKHLFNFIILILVLLI-------------RPAG 278

Query: 339 LLRLRTP 345
           L   R  
Sbjct: 279 LFGRREA 285


>gi|299538399|ref|ZP_07051682.1| ribose ABC transporter permease [Lysinibacillus fusiformis ZC1]
 gi|298725986|gb|EFI66578.1| ribose ABC transporter permease [Lysinibacillus fusiformis ZC1]
          Length = 329

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 91/312 (29%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  ++   +L +      +   + ++  Q  I  + A G+ + + + G + L+     A
Sbjct: 27  LLALIILMAVLTMTTDKFLTVSNLMNIARQSSINALLAIGMLLPILTAG-IDLSVGSILA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +      I+     +     I V  +I    G++ GL   K R  +  I+TL    I + 
Sbjct: 86  VSIMVMGIVSVNMQMGAVAGIAVCLLIGAGFGLLNGLLLTKLRLPHPFISTLGTMNIARG 145

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I +                               +        +   +    L +  +  
Sbjct: 146 IALIIT-------------------AAAPIAGFPYLVQFLGSEFVGPIPVSFLLVIGVYI 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              ++L RT        I  N++A       +    +  + +S     +AG       + 
Sbjct: 187 IFHIFLTRTQTGRYIYAIGGNKEAARLSGINVDRVLIIVYTISGFMAALAGLVMVGRVNS 246

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + +++I      GG+ ++        I+  +      +N      + 
Sbjct: 247 AFPLAGLSYELDAIAAVIIGGASFFGGVGTVWGTLIGALIIAVLRNGLNLLNVSADFQMT 306

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 307 VIGVVIIAAVFV 318


>gi|297530319|ref|YP_003671594.1| inner-membrane translocator [Geobacillus sp. C56-T3]
 gi|297253571|gb|ADI27017.1| inner-membrane translocator [Geobacillus sp. C56-T3]
          Length = 290

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 106/303 (34%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  +   GLS+V G LG+L+L     Y IGAY    + S++  + WL + V
Sbjct: 8   LVNGVSYGMLLFVITCGLSLVFGILGVLNLAHGSLYMIGAYVAYTMTSQWFENFWLALIV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++     + + L  L+       ++ ++++     ++     +  G   + +      
Sbjct: 68  APLVVAVLSLAIELILLRPTYHLGHLSQVLLTFGLAYVIHDVTSMIWGSDVLSIPLPPPL 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T                 +  +  +V+     L+  +     +T      R    +++
Sbjct: 128 SET----------LHLWNQDFPAYRLFVVAAGVVLAFCLWFVQEKTRWGAIIRAGLSDKE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I     + F       G+ G   +           +F   I+ + ++++GG+
Sbjct: 178 MINALGVNIKLVFTAVFLAGGYLAGVGGVIASPILGL--YPSMEFQTLILALVVLVVGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++    A+ ++  V      +                     L+   + ++++ +   
Sbjct: 236 GSIAGTFVASLVVGIVETFGRFL--------------VPELSLFLVFGLMVVILICKPDG 281

Query: 339 LLR 341
           LL 
Sbjct: 282 LLG 284


>gi|218780758|ref|YP_002432076.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218762142|gb|ACL04608.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 283

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 51/300 (17%), Positives = 107/300 (35%), Gaps = 27/300 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                IY++ A GL+IV G L +++    + Y +GAY+  +       S W+ +  +A+I
Sbjct: 7   LALGAIYILLAAGLTIVYGLLDVVNFAHGVFYMLGAYAVFL-VISLTGSFWIGLASAAII 65

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +G  G +  +  L+   +   +  L+++  F   +     +  G  G  V       G  
Sbjct: 66  TGLIGALAEVFLLRPLYEKHQLYPLLLTFGFSVAVPDLMKVVFGLIGKTVDYPEALSGF- 124

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                         + +  +  ++++    +  S+ L+L+++ +    R    N +   +
Sbjct: 125 ---------ILLGNIPFPKYRLFIIVLTAVVMTSLWLFLKKSDLGMVMRAATLNSRMVEA 175

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   +       F++      + GA  A                +    +V+LGG+ SL+
Sbjct: 176 LGIDVARIWTVGFSIGVGLAALGGAVAAPMVSA--SPDMGVDITVESFVVVVLGGLGSLA 233

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  I+  VV                            + I +F+V+L+R   L   
Sbjct: 234 GAVTGGLIIGQVVSFVSLFA--------------GQYSKVAIFIVMFIVLLVRPRGLFGE 279


>gi|84516230|ref|ZP_01003590.1| branched-chain amino acid ABC transporter, permease protein
           [Loktanella vestfoldensis SKA53]
 gi|84509926|gb|EAQ06383.1| branched-chain amino acid ABC transporter, permease protein
           [Loktanella vestfoldensis SKA53]
          Length = 434

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 58/345 (16%), Positives = 111/345 (32%), Gaps = 22/345 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +V  LLL                  +I      A  ++       +         AI   
Sbjct: 91  IVIGLLLGGMTVIGAILAQHRMALGRIRTLTTLAILIAGFFIYRAVFDPGVTAIEAINPS 150

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                     L + L  PV  +++     I+G  +L  R DYLAIATL ++EI   +L  
Sbjct: 151 VSG-NIGGLNLPVLLSWPVGGLLAAGAAWIIGKTALGLRSDYLAIATLGIAEIIIAVLKN 209

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRF---------FRFPSSFVIYEIFMYYVLLGM 190
              ++ G   +   DR       ++    F             +S +  ++    +   +
Sbjct: 210 EDWLSRGVKNVIGLDRPVPFEIELQQDPTFVARAVGLGLDPVTASGIYTKLAYSALFAVV 269

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +   +     ++      R IRDN+ A  ++   +    L  F + SA  G+AGA   
Sbjct: 270 LLILLWMAQMALKSPWGRMMRAIRDNETAARAMGKDVTARHLQIFILGSAICGVAGAMMT 329

Query: 251 ASRDRISPDMFKFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
               +++P  ++      +V  +VI+GG  +         ++  +      M       L
Sbjct: 330 TLDGQLTPGSYQPLRFTFLVWVMVIVGGSGNNFGAVLGGILIWWLWVQVEPMGLALMQIL 389

Query: 310 LKFDCSFNMR-----------HTTLMVIALFLVILMRSHSLLRLR 343
                  +                 M + + +V+      L+  R
Sbjct: 390 SSGLEDGSALQTRMIDAAAHMRLLTMGLLMLIVLRFSPRGLIPER 434



 Score = 41.0 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 35/91 (38%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I   L   +  +L +  G  +       +    LI  + A G+++  G  GL ++  + 
Sbjct: 4   AIRAPLLFGFVAVLMIGTGIVQGWNSALLILNMGLISAIMALGVNLQWGFAGLFNIGVMG 63

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
             A+G  + V++ +      W     + +I 
Sbjct: 64  FVALGGLAAVLISTPPTEGAWAAGGWNIVIG 94


>gi|119383256|ref|YP_914312.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119373023|gb|ABL68616.1| fructose ABC transporter membrane protein / mannose ABC transporter
           membrane protein / ribose ABC transporter membrane
           protein [Paracoccus denitrificans PD1222]
          Length = 357

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 91/318 (28%), Gaps = 20/318 (6%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +  ++ V   ++  L          + ++  QI I  +     S+VV + G + L+  
Sbjct: 44  SAVPMIVLVAAIVVFGLLSPNFFKAVTLSTILQQIAIVGILGCAQSLVVLTAG-IDLSVG 102

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                 +        RYG+   L I +      A G   G    + +             
Sbjct: 103 AIAVFSSVLMGQFTFRYGIPAPLAIALGLAAGTAMGFANGWLVARIKLPPFI-------- 154

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
               + +    I      IY A+                 +  S     + + Y +  M 
Sbjct: 155 ----VTLGTWQIILAANYIYSANETIRSSAIAAEAPALQFWGYSIQPGGVKILYAVFLMV 210

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L A +   LR TA       + D+ +A            +  + ++  F  +AG     
Sbjct: 211 ALVALLAYVLRHTAWGRHVYAVGDDPEAAELAGVRTKRVLIQVYVLAGLFCAIAGWVMIG 270

Query: 252 SRDRISPD-MFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFY 304
               +SP        NI  I+ V++GG+       S+  +     I+         +   
Sbjct: 271 RFGSVSPSASTGQLGNIQSITAVVIGGISLFGGRGSIVGMFFGALIVGVFEMGLKMVGTD 330

Query: 305 YFNSLLKFDCSFNMRHTT 322
              +         +    
Sbjct: 331 PQWTFFLIGLLIILAVAV 348


>gi|308050424|ref|YP_003913990.1| ribose ABC transporter membrane protein [Ferrimonas balearica DSM
           9799]
 gi|307632614|gb|ADN76916.1| ribose ABC transporter membrane protein [Ferrimonas balearica DSM
           9799]
          Length = 321

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/285 (12%), Positives = 90/285 (31%), Gaps = 23/285 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
              +   + ++  Q  +  + A G+++V+ + G + L+     A+               
Sbjct: 38  QFFTTGNLMNILRQTSVNAIIAVGMTLVILTAG-IDLSVGAVLALCGALGA--SMVGLEL 94

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
              +  V+ ++ G     +    +        IATL+     + + + +        G  
Sbjct: 95  PLAVTLVATLLFGLFLGSLNGLLVAKGKVQAFIATLVTMTAIRGLTMVYTDGRPISTG-- 152

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                             F F  +  ++ + M   L+ +CF+ A  +L   R  +     
Sbjct: 153 -----------FTDASDAFAFLGTGYLFGVPMPVWLMLLCFVGAWFLLNHTR--LGRYIY 199

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            I  N+ A       +   K++ + +S     +AG    +      P      E   + +
Sbjct: 200 AIGGNEAAARLSGIRVDRVKVAVYGISGMMAALAGLIVTSRLSSAQPTAGTAYELDAIAA 259

Query: 272 IVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           +V+      GG   +        I+  +      ++   +  ++ 
Sbjct: 260 VVVGGASLAGGRGFIWGTLVGALIIGFLNNALNLLDVSSYYQMIA 304


>gi|167568223|ref|ZP_02361097.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Burkholderia oklahomensis C6786]
          Length = 349

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 60/335 (17%), Positives = 121/335 (36%), Gaps = 23/335 (6%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R+  +   L L+A +  L     +    +  Y        L   + A G++++   LGL+
Sbjct: 17  RVRPFGARLPLVATLGTLAAIALVVPAIADAYWIKTLTSALTISIAAAGVALLYRQLGLV 76

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+      +G +   +  +  G+   L +   A+   A GMI GLP+L+ RG YLA+ T
Sbjct: 77  CLSQHALLGVGGWI-ALRLAHLGVPFELCMIAGAVGGSAIGMIAGLPALRLRGLYLALVT 135

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L+M+  FQ ++        G                + S  R           +   +  
Sbjct: 136 LMMAGGFQVVVSAIGFPDGGGG----------FTGHLSSGARQMMARPLVGQSDAAYFRY 185

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +     L+ ++I   RR+    +W  IR  +    +    ++  +  AF ++    G++G
Sbjct: 186 VAAWAALAFALIELHRRSKAGRSWALIRRGETTALAAGVNVVLYQTWAFGLAGLLAGLSG 245

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
              A +  ++    F  SE++++ ++ ++GG+           +L  V  L         
Sbjct: 246 GLLAGTVGQLDGRAFAASESVLLFALSVVGGVYHWFGALITGLLLRAVPALLTDFG---- 301

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                               AL   ++     +  
Sbjct: 302 --------VNGYLAMIFFGAALLHALITTPAGIAG 328


>gi|222480508|ref|YP_002566745.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239]
 gi|222453410|gb|ACM57675.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239]
          Length = 373

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/351 (12%), Positives = 100/351 (28%), Gaps = 37/351 (10%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +   LA    L +   +   +    + +  +  L+  +   GLS+    L   + +    
Sbjct: 32  LAAKLAGFSILPIGEAISIDRLGSNLWNGVVIGLVIGLAGIGLSMTYSILSFANFSHGDL 91

Query: 74  YAIGAYS-----------------------YVILGSRYGLSIWLLIPVSAMISGACGMIM 110
            + GA++                            +   +   +L    A++ G      
Sbjct: 92  LSTGAFTGWGVAFLIAGFGDIPVRALLTVGDAGSATPGDIGAHILSTPVAILVGLLVAFA 151

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
              ++    D      +   +    ++         +  I         G T        
Sbjct: 152 ATAAVALALDRAFYKPMRDRDGISILIASIGAALIVRYVIQFVYGSDRRGVTAAIDASNL 211

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
            F    +        +++    L  ++   L+RT +  A R + DN+             
Sbjct: 212 AFDPLGLSVNAHELTIVVAAIGLMLAMHFMLQRTKLGTAMRAMADNKDLALVTGIPAERV 271

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
             + + +     G +G  +   R  I  D F +   +++ + VILGG+ S+        +
Sbjct: 272 VTATWIIGGGLAGASGYLYVLLRGTIQFD-FGWLLLLLIFAAVILGGIGSVYGAIAGGLV 330

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +  V           FN    F               +  ++L+R   L  
Sbjct: 331 IGIVFTTSTVWIPSDFNQAAAF-------------AVMITMLLLRPEGLFG 368


>gi|330826682|ref|YP_004389985.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|329312054|gb|AEB86469.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 306

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 79/305 (25%), Gaps = 20/305 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV----ILGSRYGLSIWLLIPV 98
                IY + A G +I   +   L+         GA+  V    +L  +      L   V
Sbjct: 13  LALGSIYALVAVGFNITFNTTKTLNFGQGEFLVAGAFVAVSVLLLLAGKQMTDALLPSEV 72

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +                         A            +                    
Sbjct: 73  TLTRYLLSLAGSMAVLALLGVLLYYTAVQPFVGQGGMAWVMSTIGFGIIIQNTALAIWGP 132

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + S +                  VL+    +  ++   +R T I  A R +  N  
Sbjct: 133 SPLVMPSPLGNDVIRIGGAGVLPQEVLVLVASVAVLLTLDWVMRATRIGKAVRAVAQNGS 192

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    + AF +SS+  G+AG   A             +  +   S  I+GG+
Sbjct: 193 TATLMGINVGAIVVLAFVISSSLAGLAGLLIAPITTA--SVFMGLTLALKAFSSAIVGGL 250

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS         +L  +  L                          + I + +V+++R   
Sbjct: 251 TSPRGCMLGGFLLGVIEALV--------------GLWHAELREISIFILIIVVLVVRPQG 296

Query: 339 LLRLR 343
           LL  R
Sbjct: 297 LLGQR 301


>gi|298293552|ref|YP_003695491.1| inner-membrane translocator [Starkeya novella DSM 506]
 gi|296930063|gb|ADH90872.1| inner-membrane translocator [Starkeya novella DSM 506]
          Length = 291

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/308 (11%), Positives = 79/308 (25%), Gaps = 26/308 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ S      IY + A G  I+  +   ++        IG      L +          
Sbjct: 6   QYVLSGLAIGGIYALVALGFHIMWSAARAVNFAHGDTLMIGGLLAAYLVASGWPLALACA 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +      ++  L    F     +I  ++ +     ++  +  I             
Sbjct: 66  LAILVGGLFGFVLERLAVRPFAHQPNSIGWMLTTIAVGIMVESYATIE-----------T 114

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + S                    + +        +    R T I  A + +  N
Sbjct: 115 QGYALPLPSPGVAGSVQVLGAGLYPQELAIPVIALAAMLGLQALQRHTLIGRAMQAVAHN 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +      +F+++S     AG   A                +   ++ I+G
Sbjct: 175 KNAAALMGINVDLVVAFSFSLASLLGAAAGVLIAPVVQA--SATMGLLPGLKGFAVAIMG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+TS   +         + +   G                      +    + +V+L   
Sbjct: 233 GITSAPGVVITGLAYGVIEKFVEGYVS-------------TAAREIVGFSLMIVVLLAFP 279

Query: 337 HSLLRLRT 344
             L   R 
Sbjct: 280 QGLFGKRE 287


>gi|295676730|ref|YP_003605254.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295436573|gb|ADG15743.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 359

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 102/324 (31%), Gaps = 38/324 (11%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +   +L  L      +     ++  QI   V+ + G++ V+   G + L+     
Sbjct: 59  LAGALLAMIVLFSLLSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAG-IDLSVGSVL 117

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GA    ++  ++G        +   ++   G + G  ++ +R     ++  ++     
Sbjct: 118 ALGASVVSVVTLKWGWGPAAGALLGVAVAALTGTVTGAVTVGWRIPSFIVSLGVLEA--- 174

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                             A  L +  T  R+      F        + +    L    + 
Sbjct: 175 ------------------ARGLAYQMTNSRTAYIGDAFDFLSNPIALGISPAFLVAVAVM 216

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L RT        I  N++A           K+  FAV  A  G+A  F  +  +
Sbjct: 217 VIAQLVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKVIVFAVMGALSGLAALFQISRLE 276

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +               
Sbjct: 277 AADPNAGVGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLA---------- 326

Query: 310 LKFDCSFNMRHTTLMVIALFLVIL 333
            +   +   +      + +  V+L
Sbjct: 327 -QIGANEPTKRMITGAVIVVAVVL 349


>gi|291287420|ref|YP_003504236.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809]
 gi|290884580|gb|ADD68280.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809]
          Length = 301

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 96/305 (31%), Gaps = 16/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A G ++V G + L++       A+ AY  ++  ++      +   +
Sbjct: 8   IVNGLTIGSIYALVALGYTMVYGVMKLINFAHGDLVALSAYIGLVFYTQMAAGGAMPQAL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++      I+                     +  + ++     +       +      
Sbjct: 68  TIVLVFLLTAIVVAIFGVLLERIAYRPLRNAPRL--SAVVSALGASMMIQNGIMLVWGPN 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +      ++    +    V        +++    L  ++ L++  T +  A R    NQ 
Sbjct: 126 ILIFPSDILPATSWNIYGVTITFVQAAMIIITIMLMLALTLFINFTKMGTAIRASAINQD 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   + F  +  F + S    + G F       IS +   ++  +      ILGG+
Sbjct: 186 AAKLMGINVNFIIIIIFVLGSMLGAVGGLFIGMYYRGISFN-LGWTYGMSAFIAAILGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L     L  G     +                   I L +++++R   
Sbjct: 245 GNIPGSMVGGYLLGLFTALIAGYVSSAWAEAFT-------------YILLIMILIVRPTG 291

Query: 339 LLRLR 343
           +L  R
Sbjct: 292 ILGER 296


>gi|332559765|ref|ZP_08414087.1| inner-membrane translocator [Rhodobacter sphaeroides WS8N]
 gi|332277477|gb|EGJ22792.1| inner-membrane translocator [Rhodobacter sphaeroides WS8N]
          Length = 292

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 93/304 (30%), Gaps = 30/304 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   +  + A GLS+V G L ++++     + +GA +   +         L   V+ + 
Sbjct: 15  LVGAAVLALTASGLSLVFGVLRVVNVAHGEFFMLGAVAAWFVSQWVPGPPALAFAVALVA 74

Query: 103 SGACGMIMGLPSLKF---RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                  +   + +    R  Y   AT+I +     IL +      G     V       
Sbjct: 75  CPLLVAGLAALADRLVLKRLAYEPEATIIATIGLLYILQQAALTLYGPEARPVPPPFE-- 132

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                      R    +  +  +  +V+     + A + L L R+ I    R  + +++ 
Sbjct: 133 ----------ARLQLPWFGWSGYKLFVIGAAGAVLAGLWLLLARSRIGLVMRATQIDRET 182

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +    +     + FA+ +A   +A       +      +      ++   +V++GG+ 
Sbjct: 183 ASAFGIDVDRVYAATFALGAALAAIAAVLIVPIQQA--HYLMGGDPLLLSFIVVVIGGLG 240

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           SL     A  ++     +           +L       +                R   L
Sbjct: 241 SLRGTLVAALLIGVSDGVISTFFEPTLAKILATLLVALVLV-------------FRPQGL 287

Query: 340 LRLR 343
              R
Sbjct: 288 FGAR 291


>gi|294339434|emb|CAZ87793.1| putative ABC-type branched-chain amino acid transport system,
           permease component [Thiomonas sp. 3As]
          Length = 298

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 96/305 (31%), Gaps = 19/305 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +  ++Y + A G  ++  + G+ +          A +   L       +  L+  
Sbjct: 8   IIAGLMSGVLYALIALGFVLIYKASGVFNFAQGAMVLFAALAMARLQEHMPWPLAFLLAF 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + M+  A  +   +       +        ++ +   + + +     G+           
Sbjct: 68  AIMVVLAWLIERLVLRHLINQE-------GVTLLMATLGVAYFLEGLGQMVWGDDIYPID 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           LG   +  I         ++              L A + L+ +++ +  A R + D+ +
Sbjct: 121 LGMPKQPTIMLESLIPGGILVSNEDLIAAGSAAALVALLTLFFQKSGVGRALRAVADDHQ 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +    +  ++++     + G  + +               +  + +VILGG+
Sbjct: 181 AAQSIGIPLSRMWVIVWSIAGLVALVTGMIWGSKLGVQFSLS---LIALKGLPVVILGGL 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+    +L            ++   ++ +    L+          R   
Sbjct: 238 TSVPGAIVGGLIVGLGEKLAEVYLGPLLGGGIESWFAYLLALLVLLA---------RPQG 288

Query: 339 LLRLR 343
           L   R
Sbjct: 289 LFGER 293


>gi|196234306|ref|ZP_03133136.1| Monosaccharide-transporting ATPase [Chthoniobacter flavus Ellin428]
 gi|196221660|gb|EDY16200.1| Monosaccharide-transporting ATPase [Chthoniobacter flavus Ellin428]
          Length = 447

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 80/298 (26%), Gaps = 18/298 (6%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
                  + + ++  QI +  + A G+++V+ + G + L+     A+ A         Y 
Sbjct: 148 WPNFLKSENLLNIANQIAVIAIIAIGMTMVIITAG-IDLSVGSLIALSAVLAARFIRDYA 206

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
            +         +   A  ++ GL      G                +L+          G
Sbjct: 207 GATHASTTGMTIACLAAILLCGLVGAFSGGMITLFRIPPFIVTLAMMLVGSGLAYLLAQG 266

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             +           R                      +L M  L     + + R  +   
Sbjct: 267 QSIYQIPDSFVWLGRGADFLHIPN------------AVLLMLVLYGLAHVVMSRMRLGRY 314

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              +  N++A       +    L A+A S    G+ G   A+     SP      E  I+
Sbjct: 315 LYAVGGNREAARLSGVPVRRVLLFAYAASGLLAGLGGVIMASQLKSGSPTYGNMYELYII 374

Query: 270 ISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            ++V+      GG   +         +  +       N   +   +       +    
Sbjct: 375 AAVVVGGTSLSGGEGRMLGTLVGAFTIAVIQNGMNLTNVESYTHKVVLGLVILVAVLL 432


>gi|91780604|ref|YP_555811.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693264|gb|ABE36461.1| neutral amino acid ABC transporter membrane protein [Burkholderia
           xenovorans LB400]
          Length = 290

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 89/302 (29%), Gaps = 28/302 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G+S+  G   L++        +G Y      S       L + +
Sbjct: 8   LVNALTLAGLYSLVALGVSLTFGLTRLVNFAHGEILMLGGYMTFSCMSLGVP-FSLALVL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+I+     +F         +I   +   I          +  +  +     
Sbjct: 67  AFLGTFLVGLILERSLFRFTLSKPINGFIISLGLIIVIQNAVIMFYGSEPQMISSPLKTV 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        +    V        V +    L A  + + + +    A R   ++++
Sbjct: 127 -------------WSLDGVRIPSARLVVFIVAAALIAGYLAFTKYSRWGRALRACNEDRE 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L        +  FA  S   G+ G   AA               +   +I ++GG+
Sbjct: 174 GAALLGIPTNRIIMWTFAAGSGVAGLGGGLLAAMLPI--SAGEGGLVIVKAFAIALVGGL 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S + +   + I+  +     G                      +  I + +V+L+R   
Sbjct: 232 GSPNGVVAGSLIVALLETFLPG------------AVMPVEWAPAVPFILIVIVLLVRPQG 279

Query: 339 LL 340
           L 
Sbjct: 280 LF 281


>gi|82779059|ref|YP_405408.1| ribose ABC transporter permease protein [Shigella dysenteriae
           Sd197]
 gi|309784466|ref|ZP_07679105.1| ribose transport system permease protein rbsC [Shigella dysenteriae
           1617]
 gi|81243207|gb|ABB63917.1| D-ribose high-affinity transport system [Shigella dysenteriae
           Sd197]
 gi|308927973|gb|EFP73441.1| ribose transport system permease protein rbsC [Shigella dysenteriae
           1617]
          Length = 321

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 90/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                   Q 
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        +     ++G+ FL+A
Sbjct: 127 FIATLVTMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A       +   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|163859062|ref|YP_001633360.1| putative branched-chain amino acid transport system permease
           [Bordetella petrii DSM 12804]
 gi|163262790|emb|CAP45093.1| putative branched-chain amino acid transport system permease
           [Bordetella petrii]
          Length = 309

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 99/305 (32%), Gaps = 16/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI----WLLIPV 98
            +  ++Y +   G  ++  + G+ +        + A S           +     LL  V
Sbjct: 12  LMSGMLYALVGLGFVLIFKASGVFNFAQGAMVLVAALSMARFSEWLPAWLGFESLLLANV 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A I  A  M +   +++       +   + + +   + I +     G+     +     
Sbjct: 72  LAFIVSAVLMFLLAVAVERYVLRHLVNQEVTTLLMATLGISYFLDGLGQIAFGSSVYSID 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G                V+  +      L    L A++ L+ + T+   A R + D+ +
Sbjct: 132 VGMPKDPAFILESLFEGGVLINLEDLTAALVAALLVAALALFFQYTSTGRALRAVADDHQ 191

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +    +  ++V+     +AG  + +            +  +  + +VILGG+
Sbjct: 192 AAQSIGIPLNRIWVIVWSVAGLVALVAGIIWGSKFGVQFTLS---TAALRALPVVILGGL 248

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+    +L            ++   +          +   + +L R   
Sbjct: 249 TSVPGAILGGLIIGVGEKLSEVYLGSLVGGGIEIWFA---------YVLALVFLLFRPQG 299

Query: 339 LLRLR 343
           L   +
Sbjct: 300 LFGEK 304


>gi|163796040|ref|ZP_02190003.1| inner-membrane translocator [alpha proteobacterium BAL199]
 gi|159178795|gb|EDP63333.1| inner-membrane translocator [alpha proteobacterium BAL199]
          Length = 338

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/336 (14%), Positives = 105/336 (31%), Gaps = 43/336 (12%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA--------------------- 78
            +   +   Y + A GL+++ G+LG+++      + +GA                     
Sbjct: 9   LNGLDKGGAYALIALGLTLIFGTLGVVNFAHGALFMLGAFCAVTMQKLLTLSRQIEDTSV 68

Query: 79  ----------YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                     Y  +  G    L I   +P++ +++    +++GL   +    Y    +  
Sbjct: 69  TFFKAYKEVPYLKIWFGDTGLLLIDYSVPLAVLLTIPVMLLIGLIMERGLIQYFYKRSHA 128

Query: 129 MSEIFQN-ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
              +    + I  + I     G               + I  +      ++Y  +    L
Sbjct: 129 EQILVTFGLAIVVQEIIKAVFGANPIPTPAPNVVAGSADIGTWLGLGPTLVYPWWRLIYL 188

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                + A +  +LR T      R    +++    L   +       F +++   G+AG 
Sbjct: 189 AFSAAIIAGVFAFLRFTTFGMVVRAGMQDRETVGLLGIDVQRRFTIVFGLAAVVAGLAGM 248

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +            +F     V+ +V    M SL     A  +L  +           F 
Sbjct: 249 MYTPILPPDYHMGMEFLVLSFVVVVVGG--MGSLEGAVLAGFLLGILQS---------FA 297

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
           S+ +           ++ +   +V+ +R   LL  R
Sbjct: 298 SMNEVKSIIPGIDQIIVYLVAVVVLQVRPRGLLGRR 333


>gi|123440413|ref|YP_001004407.1| ribose ABC transporter permease protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122087374|emb|CAL10155.1| putative sugar transport system, permease protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 321

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 90/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAVVSSLSPNFFTLNNMFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +   G+   + +                + F  
Sbjct: 82  LTGAVAASIVGLEVNALVAVGAALALGAFVGGITGVIVAK------------GKVQAFIA 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T V     +F      +   + +   +  M  +  
Sbjct: 130 TLVMMLLLRGVTMVYTNGSPINTGFTDVADTFGWFG-----IGRPLGIPTPIWLMAIVFI 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 185 AAWYMLHHTRLGRYIYALGGNESATRLSGISVDKVKIIVYSLCGLLAALAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGQIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|332284758|ref|YP_004416669.1| inner-membrane translocator [Pusillimonas sp. T7-7]
 gi|330428711|gb|AEC20045.1| inner-membrane translocator [Pusillimonas sp. T7-7]
          Length = 291

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 102/303 (33%), Gaps = 27/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + + GL+I+ G+LG+++      + +G+Y+          S  + I  
Sbjct: 11  LFNGLATGLLLALISTGLTIIYGTLGVVNFAHGALFVVGSYA-GFTAYGMTDSFLIAIVA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            ++++   G+I+    ++          ++++     IL++      G   + +    + 
Sbjct: 70  GSLVALVVGLIIERGLMRQYYGRPPEDQILVTFGIGIILVELVRSIYGGISLSIPTPEWG 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                ++Y ++    L       A +   L RT++    R   ++ +
Sbjct: 130 QGI----------AHIGSLVYPLYRLQALGIAAATLALLYYVLYRTSLGLIVRAGIEDAQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    L  F + +   G AG   +           +   +  V+ ++    +
Sbjct: 180 MVNALGINVKRTFLLVFGIGAMAAGYAGVIDSPIVTLSPDMGHRILVDSFVVVVIGG--V 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         I   ++ L    N                    ++ + + LV++ R   
Sbjct: 238 GSFPGAIVGGIIAGEILSLTSMFN--------------PAYSHVMLFVVMALVLIFRPQG 283

Query: 339 LLR 341
           L+ 
Sbjct: 284 LMG 286


>gi|238799059|ref|ZP_04642518.1| Inner-membrane translocator [Yersinia mollaretii ATCC 43969]
 gi|238717112|gb|EEQ08969.1| Inner-membrane translocator [Yersinia mollaretii ATCC 43969]
          Length = 167

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 54/178 (30%), Gaps = 14/178 (7%)

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
            FP S     I ++   L +   S ++   L RT        +RD +             
Sbjct: 3   GFPVSATSTRIALFLATLVLLIASLALGFALARTKFGRVLTAVRDAENRLTFCGYDPKGF 62

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           KL  + +S+    +AGA +      I+P     + +I     V LGG  +L        I
Sbjct: 63  KLFVWTLSAVLCALAGALYVPQVGIINPSEMSPTNSIEAAIWVALGGRGTLIGPVLGAGI 122

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
           + G                  F  +        + +   LV L     ++ L      
Sbjct: 123 VNGAKSW--------------FTMAMPEYWQFFLGLIFILVTLFLPKGVIGLLKRGRE 166


>gi|226361260|ref|YP_002779038.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226239745|dbj|BAH50093.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 294

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 95/292 (32%), Gaps = 29/292 (9%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
             G +G++++        G+Y+  +   + S    S+++ + V  ++ GA G+++ +  +
Sbjct: 28  TFGQMGVINMAHGEFIMAGSYTAYVVQQVVSSATGSLFISLLVGFVVGGAMGVLLEVTLV 87

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
           K          L+   +   +    + +    A    A                      
Sbjct: 88  KRMYHRPLDTLLVTFGVGLILQQLARDVFGAPAVNVAAPGWLSG-----------GVEIL 136

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
             +      ++L+       ++ L ++++++    R +  N+    +   +     ++ F
Sbjct: 137 GAVVPKTRLFILVLAVVAVVALSLAMQKSSMGRRIRAVVQNRDLAETSGISSRRTDVTTF 196

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            + S   G+AG   A +    +      S  I    +V++GG+  +     A   L  + 
Sbjct: 197 FIGSGLAGVAGV--ALTLIGSTSPTIGQSYLIDAFLVVVVGGLGQMKGAVIAAFALGILN 254

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                        ++ F                   + +R   L  ++T S 
Sbjct: 255 SFVEYSTTASIAKVIVFVVIVVF-------------LQVRPQGLFAVKTRSL 293


>gi|51245120|ref|YP_065004.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein [Desulfotalea psychrophila LSv54]
 gi|50876157|emb|CAG35997.1| probable high-affinity branched-chain amino acid ABC transporter,
           permease protein [Desulfotalea psychrophila LSv54]
          Length = 296

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 92/305 (30%), Gaps = 26/305 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ +      +Y + A G +I+  + G+++        +G    + L     L + + +
Sbjct: 8   QYLLAGITYGSMYAIVAIGFNIIYNTTGIINFAQGEFVMLGGMLSISLLQFMPLPLAIGL 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V   ++    + +           L I  L    + + I+I        +         
Sbjct: 68  AVVLTMAVGGLVEI-----------LFIRWLKNPGVLRMIVITVGLSILLREIALHIWGE 116

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                     + +V+     L   + L+ + + +    R    N
Sbjct: 117 GVYSLPYFYGNEISTVVILGARVSPQILWVIGVCLLLVVLLHLFFKTSPMGREMRACAVN 176

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +KA              +F +S+    +AGA  +      +      +  I   ++ ILG
Sbjct: 177 KKAALLCGINARNMVTFSFMLSAGIGALAGAVMSPITY--TQYDSGAALAIKGFTVAILG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +L     A  +L  +      +    F   +                 L +++ +R 
Sbjct: 235 GLGNLFGAVAAGILLGVLEAFSVSVLPLAFQDAIAIS-------------LLLVILCVRP 281

Query: 337 HSLLR 341
           H L  
Sbjct: 282 HGLFG 286


>gi|262401997|ref|ZP_06078562.1| putative sugar ABC transporter (permease) [Vibrio sp. RC586]
 gi|262351969|gb|EEZ01100.1| putative sugar ABC transporter (permease) [Vibrio sp. RC586]
          Length = 329

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/326 (11%), Positives = 90/326 (27%), Gaps = 26/326 (7%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            ++   Y      + +     + L      S   + ++  Q     + A G++ V+ +  
Sbjct: 17  PIQWRDYIIYFVFVGIFIFFSVMLHDKGFLSSVNLMNIARQTATIAIMAVGMTFVLSAA- 75

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+     A+ A    +   +   SI + +  + ++    G I G+   +        
Sbjct: 76  EIDLSFGATVALAAIVSAL-TLQETDSILMAVSAALLVGTMIGFINGIFVTQVGIPSF-- 132

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
                             +T G  GI      +        +                  
Sbjct: 133 -----------------LVTLGTTGIITGIARWSTSLQSIPIDNDTYAFIFGSGDIGPFS 175

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            + +    ++A     LR T           N+ +       +   KL    ++     +
Sbjct: 176 VLFIWTLLVAAVGAFVLRNTTFGKHVLATGGNKVSAMYSGINVNRIKLYVLMLNGFLAAL 235

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
           AG  ++         + +    +++ +++I      GG  ++        I+  V     
Sbjct: 236 AGILYSGRLYSARYTLGESDLMLVIAAVIIGGTSLFGGKGTVIGSVIGALIMGMVNNGLI 295

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMV 325
            M       L+       +  T  M 
Sbjct: 296 LMGLNVDQQLILRGIIVIVAVTFTMG 321


>gi|163733627|ref|ZP_02141070.1| Ribose ABC transporter, permease protein [Roseobacter litoralis Och
           149]
 gi|161393415|gb|EDQ17741.1| Ribose ABC transporter, permease protein [Roseobacter litoralis Och
           149]
          Length = 353

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 87/313 (27%), Gaps = 18/313 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L     +   L      S   +  +  Q+ I  + A   S+V+ + G + L+     
Sbjct: 45  LIVLLASIAIFGVLLGTKFFSPFALTLILQQVQIVGIVAAAQSLVILTAG-IDLSVGAIA 103

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I +        RYGL + + I          G + G      +     +   +   +  
Sbjct: 104 VISSVVMGQFSFRYGLPVEVAIVCGLAFGTMIGAVNGWLIAVMKLPPFIVTLGMWQIVLA 163

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +     T     I     L                 + F I      + ++ M  L 
Sbjct: 164 ANFLYSANETIRSQDIAEQAPL------------LQLMGTKFNIGGAIFTFGVVFMLLLV 211

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L+ TA       + D+ +A       +    +S +A++      AG        
Sbjct: 212 LVLAYVLKHTAWGRHVYAVGDDPEAAALSGVNVKKTLISVYALAGLICAFAGWALIGRIG 271

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +SP   +      + ++VI      GG  S+        I+         +      + 
Sbjct: 272 SVSPTSGQLLNIESITAVVIGGISLFGGRGSILGTFFGALIVGVFTLGLRLLGADAQWTF 331

Query: 310 LKFDCSFNMRHTT 322
           L            
Sbjct: 332 LLIGALIIAAVAV 344


>gi|218702601|ref|YP_002410230.1| ribose ABC transporter permease [Escherichia coli IAI39]
 gi|218372587|emb|CAR20461.1| D-ribose transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI39]
          Length = 321

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 96/313 (30%), Gaps = 25/313 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  I-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           + GA +  I+G      + +   ++   +      + +   + +     +  +++     
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGRLQAFIATLVMMLLLRGVT 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +     P+  G                       F +        +     ++G+ FL+
Sbjct: 142 MVYTNGSPVNTG----------------FTENADLFGWFGIGRPLGVPTPVWIMGIVFLA 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +L   R  +      +  N+ A       +   K+  +++      +AG    A   
Sbjct: 186 AWYMLHHTR--LGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLS 243

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++V     + GG   +        IL  +      +    +  +
Sbjct: 244 SAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQM 303

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 304 IVKAVVILLAVLV 316


>gi|190890314|ref|YP_001976856.1| ribose ABC transporter permease [Rhizobium etli CIAT 652]
 gi|190695593|gb|ACE89678.1| ribose ABC transporter, permease protein [Rhizobium etli CIAT 652]
          Length = 316

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 93/314 (29%), Gaps = 23/314 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  V+  +          + +    + +QI I  + A G++ V+   G + L+     
Sbjct: 6   VAIALVLIVIFFSATAPYFATPENFLKIFVQIAINTVLASGMTFVILVGG-IDLSVGSLL 64

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       +     LS W  I ++++ S   G I+G  +                    
Sbjct: 65  ALCTVIGATIMIDPRLSPWAAIVLASLASMGTGAILGAINGWV----------CEKWKLP 114

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           + ++    +        V      +    +  + F       +   IF+  +++ +    
Sbjct: 115 SFIVTLGMLNVASGLARVVSDNSTITGLPQPFVDFGNLIFWGIFPSIFLIAIVVVLVGWF 174

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                  R T        I  N++A           K++ F +S    G+A   +    +
Sbjct: 175 VL-----RYTVFGRFVFAIGTNEEAVRLSGHEPKRYKIAVFTISGLTAGIAAMVYLLRLN 229

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            +   +      +  I+ VI+GG        S+        IL  +      +       
Sbjct: 230 -VGSPVAGIGYELNAIAAVIIGGTSLSGGKGSIVGTLVGACILQVLSTGLQLLGADDNIK 288

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 289 PIVIGAVIVLAVIL 302


>gi|296330190|ref|ZP_06872671.1| ribose ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305676206|ref|YP_003867878.1| ribose ABC transporter permease [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296152458|gb|EFG93326.1| ribose ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414450|gb|ADM39569.1| ribose ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 322

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 103/312 (33%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L   +  +++ +   +      I ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 25  FLGLFILVIIVSILNPSFLEPLNILNLLRQVAINGLIAFGMTFVI-LTGGIDLSVGAILA 83

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     +         L I +  +I    GMI GL   K +      ATL    +F+ 
Sbjct: 84  LSSALVAGMIVSGVD-PVLAIILGCIIGAVLGMINGLLITKGKMAPFI-ATLATMTVFRG 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L   + F      Y + +    + M     
Sbjct: 142 LTL-----------------VYTDGNPITGLGTNYAFQLFGRGYFLGIPVPAITMVLAFV 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + + L +T        I  N+KA F     +   K+  ++++     +AGA   +    
Sbjct: 185 ILWVLLHKTPFGRRTYAIGGNEKAAFISGIKVTRVKVMIYSLAGLLSALAGAILTSRLHS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P   +  E   + ++V     + GG   +        I+  +      +    F  L+
Sbjct: 245 AQPTAGESYELDAIAAVVLGGTSLSGGRGRIIGTLIGVLIIGTLNNGLNLLGVSSFYQLV 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKGIVILIAVLL 316


>gi|253584016|ref|ZP_04861214.1| ribose transport system permease RbsC [Fusobacterium varium ATCC
           27725]
 gi|251834588|gb|EES63151.1| ribose transport system permease RbsC [Fusobacterium varium ATCC
           27725]
          Length = 308

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 88/312 (28%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V++ +++ +      S   I ++  Q  I  + A G++ V+   G + L+     A
Sbjct: 11  LIGLVIFSIIVAILNPRFLSMANILNVLRQTSINSIIAIGMTFVI-LTGGIDLSVGSILA 69

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                        GL   + + ++ ++    G   G      +     +           
Sbjct: 70  FCGAVMAY-LLNIGLEPVIALIITLLLGMIFGFFNGFLVSVMKLQAFIVT---------- 118

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +      +        +  +  I    M ++ +G      
Sbjct: 119 -LVTMTFLRGATLVFTNGKPITVRDGGMLFENIGDGYLFNIPIPIYLMIFLFIGG----- 172

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L  T        I  N++A       +   K+  +        +AG    +    
Sbjct: 173 --HYILSHTKFGRYTYAIGGNEEATKLSGINVDKIKIWVYGTCGVLAALAGVITTSRLFS 230

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG+  ++  A    I+  +      ++   +  ++
Sbjct: 231 AQPTAGTGYELDAIAAVVLGGTSLSGGVGKITGTALGAIIIGVLGNALNLLDVSSYYQMM 290

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 291 IKALVILIAVLI 302


>gi|188587284|ref|YP_001918829.1| Monosaccharide-transporting ATPase [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179351971|gb|ACB86241.1| Monosaccharide-transporting ATPase [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 325

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 89/312 (28%), Gaps = 27/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++  ++L +      +   + ++  Q  +  + A GL+ V+   G + L+     A
Sbjct: 30  VIGLILICVVLAILTPRFLTVSNLFNVLRQTSLNAIMAVGLTFVI-LTGGIDLSVGSVLA 88

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
               S     +        +     +++G+         +        IATL M  + + 
Sbjct: 89  FSGVSAA--TAAEMGLPAPMAIFVGLVAGSALGFFNGIVITKGKVPPFIATLAMMTMAR- 145

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                        G  V      L           R     V   + +  ++  + +   
Sbjct: 146 ------------GGALVVSDGRPLSGLGEGFHFIGRGMVGAVPVPVILTLIIFIVAYYIL 193

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +T           N++A           KL A+ +S     ++     +    
Sbjct: 194 ------TQTRTGRYIYATGSNEEAAKLTGINTDRIKLFAYTLSGFTAALSAMIIISRLGS 247

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P     +E   + ++VI      GG+ S+        I+  +      +N   +  L+
Sbjct: 248 APPTAGDGAELDAIAAVVIGGTSLAGGIGSVFGTFIGATIIGVLNNGLNLLNVSSYYQLV 307

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 308 VRGAVILVAVLL 319


>gi|86356265|ref|YP_468157.1| ribose ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86280367|gb|ABC89430.1| ribose ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 316

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 93/314 (29%), Gaps = 23/314 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  V+  +          + +    + +QI I  + A G++ V+   G + L+     
Sbjct: 6   VAVALVLILIFFSATAPYFATPENFLKIFVQIAINTVLASGMTFVILVGG-IDLSVGSLL 64

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       +     LS W  I ++++ S   G I+G  +                    
Sbjct: 65  ALCTVIGATIMIDPRLSPWAAIVLASLASMGTGAILGAINGWV----------CEKWKLP 114

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           + ++    +        V      +    +  + F       +   IF+  +++ +    
Sbjct: 115 SFIVTLGMLNVASGLARVVSDNSTITGLPQPFVDFGNLIFWGIFPSIFLIAIVVVLVGWF 174

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                  R T        I  N++A           K++ F +S    G+A   +    +
Sbjct: 175 VL-----RYTVFGRFVFAIGTNEEAVRLSGHEPKRYKIAVFTISGLTAGIAAMVYLLRLN 229

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            +   +      +  I+ VI+GG        S+        IL  +      +       
Sbjct: 230 -VGSPVAGIGYELNAIAAVIIGGTSLSGGKGSIVGTLVGACILQVLSTGLQLLGADDNIK 288

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 289 PIVIGAVIVLAVIL 302


>gi|72383797|ref|YP_293151.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72123140|gb|AAZ65294.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 295

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/315 (15%), Positives = 105/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y M + GL+++ G L +++      Y +GA+   +  +
Sbjct: 4   LFGIPLPALMSQLLIGLVNGSFYAMLSLGLAVIFGLLNVINFAHGTLYMVGAFLAWMGMN 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GLS W ++ ++ +I GA G  +    L++      +  L+++     +L        G
Sbjct: 64  YLGLSYWTMLLLAPVIVGALGYFIERTMLRWLYKVDHVYGLLLTLGITLVLEGVFRAAYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G               F++   +  +V++       S    + RT +
Sbjct: 124 VSGQPYGAPSELTGA----------VDLGFMMLPTYRVWVVVASLAACFSTGYVIERTKL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A   +AG   A         +   +  
Sbjct: 174 GAYLRAGTENPKLVEAFGVNVPVMVTLTYVFGVALAALAGVLAAPIIQV--SPLMGSNLI 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I V ++V++GGM S+         L  +                     +     T++ I
Sbjct: 232 ITVFAVVVIGGMGSIIGSIVTGLGLGVIEGFTRVF--------------YPELSATVVFI 277

Query: 327 ALFLVILMRSHSLLR 341
            + +++L+R   L  
Sbjct: 278 LMAVILLVRPSGLFG 292


>gi|27381515|ref|NP_773044.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354683|dbj|BAC51669.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 288

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 88/303 (29%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y +F  GLS+ VG + ++++       +GAY   ++ S  G+  +  + V
Sbjct: 8   LLNGLMLGALYALFGLGLSLSVGVMRMINIAHGDLIVVGAYLTSVVMSGAGVGAFTALLV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +  A G I+ +  L       A+A L+++     +L                     
Sbjct: 68  VIPVMFALGWILQIILLNRVVGKDALAPLLLTFGLSIVLQNVLQEIFTAD---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +     +    F    V   +      L    L  +    +  T      R + D+  
Sbjct: 118 TRSLQAGDLAGLGFNVFGVSIGVLPLVSALASIALLGATHWLVGHTHFGRQARAVSDDPG 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +             V  + IG+A   +A                +     V+LGG+
Sbjct: 178 TARLVGVNDRRLFGIVTGVIFSMIGVAAVLYALRTPF--SPTAGPERLLYSFEAVVLGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        ++         +                        +A  + +L R   
Sbjct: 236 GNVWGTLFGGLVIGVAQLFGAKIASGLGP--------------FFGHLAFLVALLARPQG 281

Query: 339 LLR 341
           L  
Sbjct: 282 LFG 284


>gi|303253745|ref|ZP_07339881.1| ribose ABC transporter permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307248718|ref|ZP_07530731.1| Ribose transport system permease protein rbsC [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|302647401|gb|EFL77621.1| ribose ABC transporter permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306854645|gb|EFM86835.1| Ribose transport system permease protein rbsC [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 319

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 80/312 (25%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        S   + ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 17  IIALLALIVVVSFLNPNFFSVDNLLNILRQTSVNAIIAIGMTFVILIAG-IDLSVGSVLA 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L         ++  V    +    +   L +                + F  
Sbjct: 76  LTGAVAATLIGLDLSIYLVVPAVLLFGAAIGLLNGALVA------------FGKVQAFMA 123

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            LI    +            +    +              F +        +L       
Sbjct: 124 TLITMLLLRGVTMIYMEGRPISTGFSDNADYFAEIGTGELFGVPVPVWLMFILFAIGWFI 183

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +T I      +  N+ A       +   KL  FAVS     +AG    +    
Sbjct: 184 L-----TQTRIGRYIYALGGNESATALSGINVNKIKLFVFAVSGVLAALAGLIVTSRLGS 238

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+     +GG   +        I+  +      ++   +  L+
Sbjct: 239 AQPTAGSGYELDAIAAVVVGGTSLMGGKGRIIGTLIGALIIGFLSNALNLLDIDSYYQLV 298

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 299 AKALVILAAVIL 310


>gi|238921725|ref|YP_002935240.1| ribose ABC transporter permease protein [Edwardsiella ictaluri
           93-146]
 gi|238871294|gb|ACR71005.1| ribose transport system permease protein RbsC [Edwardsiella
           ictaluri 93-146]
          Length = 326

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 87/312 (27%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 27  LIALLVLIAVVSSMSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +   G    + +                     
Sbjct: 86  LTGAVAASIVGMDVNALVAVGAALALGAAIGGCTGVIVAKGKVQ--------AFIATLVM 137

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L+          G  V               +   F    +   + M   +  M  + A
Sbjct: 138 MLLLRGVTMVYTDGSPVNTGFS---------AQADLFGWFGIGRPLGMPTPIWLMIVVFA 188

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L  T +      +  N+ A      ++   K++ +A+      +AG    A    
Sbjct: 189 LAWYMLHHTRMGRYIYALGGNEAATRLSGISVDRVKIAVYALCGLLSALAGVIEVARLSS 248

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 249 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIMGTLIGALILGFLNNGLNLLGVSSYYQMI 308

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 309 VKAAVILLAVLV 320


>gi|187920368|ref|YP_001889399.1| monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
 gi|187718806|gb|ACD20029.1| Monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
          Length = 352

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 90/297 (30%), Gaps = 23/297 (7%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           L      + + +  + + + I  +   G+++V+  +  + L+      I AY+   L   
Sbjct: 52  LAKPQFLNLQNLRDVLLNVSIISLLTAGMTVVI-LMRHIDLSVGSTVGISAYAVGSLYVA 110

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
           +     ++   + +  G     +    +        +ATL    IF+     W       
Sbjct: 111 FPHMPVIVALAAGLAIGLVAGTINALLVGVGRVPSLVATLSTLYIFRGADYAWVH----- 165

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                            SL   F   ++  +  I    ++  +  +  ++ L   R    
Sbjct: 166 ----------GGQINATSLPDAFSRLATGTLLGIPTLALIAVVVLIGLAVYLKQFRG--G 213

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF-----K 262
                I  N +A       +    ++ F +S A  G AGA + A    +          +
Sbjct: 214 REHYAIGSNPEAARLAGVNVERRVMAGFLLSGAIAGFAGALWLARFGTVDASTAKGIELQ 273

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                +V S+ I GG+ ++        +L  +      ++   F             
Sbjct: 274 VVAAAVVGSVAITGGVGTILGATLGALVLGVISIALVVLHVSPFWEQAIEGALIVAA 330


>gi|39937087|ref|NP_949363.1| branched chain amino acid ABC transporter permease
           [Rhodopseudomonas palustris CGA009]
 gi|192292921|ref|YP_001993526.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|39650945|emb|CAE29468.1| possible branched-chain amino acid ABC transport system permease
           protein [Rhodopseudomonas palustris CGA009]
 gi|192286670|gb|ACF03051.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 341

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/299 (16%), Positives = 115/299 (38%), Gaps = 15/299 (5%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
                + +  G     +Y+  +  +I+   +FA  L +++G  G++SL     + +GAYS
Sbjct: 25  FAFWAVLIGCGLLFPSRYL--IMTEIVRLGLFALSLDLILGYAGIVSLGHAAFFGVGAYS 82

Query: 81  YVILGSRYGL-SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
             +L     +    L + V+ + +   G       ++       + TL ++ + + +  +
Sbjct: 83  AGLLALHGIVGEPVLALLVAGLAAAVLGFATSFLVIRGVDLTRLMVTLGIALLLEALAER 142

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           +  IT G  G+        LG               F ++    ++  + + F+   +  
Sbjct: 143 FSDITGGTDGLQGIVMQPLLGI------------FEFDLFGKVGFWYTVAVLFVLFLLAR 190

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +    + R IR+N     ++   +    ++ +  ++ + G+AGA F  +    S D
Sbjct: 191 RVVHSPFGLSLRAIRNNPLRASAVGIPVNTRLVAIYTFAAFYAGLAGALFTQTTQLASLD 250

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           +F F  +  +I +++LGG   L        +   + E    +   Y+   +       +
Sbjct: 251 VFSFERSADLILVLVLGGTGYLYGGLIGAVVFKLLQETFSILTPQYWLFWIGLVLVVIV 309


>gi|261494215|ref|ZP_05990715.1| D-ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261310118|gb|EEY11321.1| D-ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Mannheimia haemolytica serotype A2 str. OVINE]
          Length = 324

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 87/311 (27%), Gaps = 23/311 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  +++ +      S   I ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 22  FVALFILIVIVSMINPDFFSVDNILNILRQTSVNAIIAVGMTFVILIAG-IDLSVGSVLA 80

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L       + ++  V  + +   G+   + +                + F  
Sbjct: 81  LTGAVAATLVGSELPILLVIPLVLLLGTAFGGISGAIVAK------------GKVQAFIA 128

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +          F      Y   +   +  M  +  
Sbjct: 129 TLVTMTLLRGITMVYTDGRPISTGFSDQADA-----FAFIGTGYLFGIPVPIWIMAVVFG 183

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L+ T I      +  N+ A       +   K+  FAVS     +AG    +    
Sbjct: 184 LAWYILKHTPIGRYIYALGGNESATQLSGINVNKIKIFVFAVSGFLSALAGLIVTSRLSS 243

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+     +GG   +        I+  +      ++   +  ++
Sbjct: 244 AQPTAGVSYELDAIAAVVVGGTSLMGGKGRVMGTLVGALIIGFLNNALNLLDISSYYQMI 303

Query: 311 KFDCSFNMRHT 321
                      
Sbjct: 304 AKALVILAAVL 314


>gi|261419708|ref|YP_003253390.1| inner-membrane translocator [Geobacillus sp. Y412MC61]
 gi|319766526|ref|YP_004132027.1| inner-membrane translocator [Geobacillus sp. Y412MC52]
 gi|261376165|gb|ACX78908.1| inner-membrane translocator [Geobacillus sp. Y412MC61]
 gi|317111392|gb|ADU93884.1| inner-membrane translocator [Geobacillus sp. Y412MC52]
          Length = 286

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 101/304 (33%), Gaps = 28/304 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++Y M A GL+I++G + +++L     + +GAY          L+ W+ + +
Sbjct: 8   LLTGVAYGMLYFMIAAGLTIILGVMNVVNLAHGTLFMLGAYI-AFTFINEELNFWIALFL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  ++   G+ +    +K          L+   +   I    + I               
Sbjct: 67  AVFLTAIFGLFLEKWLIKHVYGKELEQVLLTFGLSFIIADAVEWIWG-----------TE 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           + T     +           + ++  +V+   C L+  +     +T I    R   D++ 
Sbjct: 116 MHTLPVPDLLSGSLSIGDTAFPVYRLFVVFIGCLLALLLWYLETKTRIGAIIRAGVDDRA 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       FA  +A  G++G          +    +     ++  +V++GG+
Sbjct: 176 MVSALGINVGLVFTGVFAFGAALAGLSGVLGGPLIGMYTGMDSEILVTSLI--VVVIGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S          +  +  L                  F       + + + +V+++R   
Sbjct: 234 GSWKGSFIGAIAIGVIETLGK--------------VWFPSLSMLTVFLIMMIVLIIRPQG 279

Query: 339 LLRL 342
           L   
Sbjct: 280 LFGR 283


>gi|167041471|gb|ABZ06222.1| putative branched-chain amino acid transport system / permease
           component [uncultured marine microorganism
           HF4000_007D16]
          Length = 455

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 52/291 (17%), Positives = 95/291 (32%), Gaps = 38/291 (13%)

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            I     V A+ +     ++G  +L  R DYLAIATL +SEI   IL     +  G   +
Sbjct: 161 PIIFSWFVGALFAAGVAYVIGKITLGLRSDYLAIATLGISEIIIAILKHEDWLARGVKNV 220

Query: 151 YVADRLYFLGTTVRSLIRFFR---------------------------FPSSFVIYEIFM 183
               R       ++    F                                S V  ++  
Sbjct: 221 IGLKRPVPYEVNLQETDWFINLVEKFHSRSLDLINDPSEKQEAIKQLVIEGSSVFVKLCY 280

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
             +   +  +   +      +      R IRDN++A  ++   ++   L+ F + SA +G
Sbjct: 281 AGLFAIVVIILLILCQKALYSPWGRMMRAIRDNEEAANAMGKNVVKQHLNIFILGSAVVG 340

Query: 244 MAGAFFAASRDRISPDMFKFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           +AGA         +P  F+      ++  +VI+GG  +         ++  V        
Sbjct: 341 IAGAMLVTYDGLFTPGSFQPLRFTFLIWVMVIVGGSGNNFGAILGGCVVWFVWIEAAPAA 400

Query: 303 FYYFNSLLKFD----------CSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            Y  N                 S       +M + L L++  R   ++  +
Sbjct: 401 LYLINLFTSAGEINPFKAHLIESIPYFRYLIMGMGLLLIMRYRPKGIIPEK 451



 Score = 44.1 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 45/114 (39%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +LA +  L L + +G  +S  +  S+    LI  +   G++I  G  GL ++  +   A
Sbjct: 7   VVLAYLIMLSLIVIVGIFQSWSFALSILNLCLISAVMTMGVNIQWGYAGLFNVGIMGFTA 66

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
           +G  + V++        W +  +S + S A  + + L        Y        
Sbjct: 67  LGGLAAVLVSVPPVREAWQVGGLSMIASLAIIIAIVLAVRFILKQYPKSNKRTF 120


>gi|145591710|ref|YP_001153712.1| inner-membrane translocator [Pyrobaculum arsenaticum DSM 13514]
 gi|145283478|gb|ABP51060.1| inner-membrane translocator [Pyrobaculum arsenaticum DSM 13514]
          Length = 321

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/328 (11%), Positives = 107/328 (32%), Gaps = 10/328 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             +  +  +  +  +    + + +    +   + V+ + GL++   +  + +    +   
Sbjct: 3   IAVIFLALIAAWALISLPFTPREVIDSVLYASLLVLASIGLTLTYQTTKVPNFAHGVFLN 62

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +G  S + +   Y  + +  +P++ ++     +++ L  +             +S+    
Sbjct: 63  LGVMSALTIAQVYKTAAYYALPLAVVLGALAALLLYLFLIPL-------YRRGVSQEVMM 115

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +      I         AD            I    +  +         +       ++ 
Sbjct: 116 MATMAYNIVYIGILNAFADWAGRTWGIFTRGITIIPYDVNLAGLRGVYIFAPATAAAITL 175

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + ++L RT    A R   +N+    SL   +      A+ ++ A  GMAG F     + 
Sbjct: 176 VLYIFLNRTKPGTALRAAVENEDLARSLGIDVEKMYAVAWILAGAVAGMAGVFLPLYIEA 235

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
                  +       +  I+GG++S+        ++  V  L       + N LL     
Sbjct: 236 --TPEVGWLMLASFFAASIVGGLSSIYGAVVGGVLMGFVEVLGTFQFAMFLNWLLGVPPY 293

Query: 316 -FNMRHTTLMVIALFLVILMRSHSLLRL 342
                   + ++A+ + +++    +L  
Sbjct: 294 VITAYRPLVPLLAIAIALIIAPRGILGR 321


>gi|254451734|ref|ZP_05065171.1| branched-chain amino acid ABC-type transport system, permease
           component [Octadecabacter antarcticus 238]
 gi|198266140|gb|EDY90410.1| branched-chain amino acid ABC-type transport system, permease
           component [Octadecabacter antarcticus 238]
          Length = 289

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 85/303 (28%), Gaps = 26/303 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                I ++ A GL+I+ G++G+++L       +GAY+        G  I L +P   ++
Sbjct: 12  LSMASILLIIALGLAIIYGAMGVINLAHGEFVMLGAYTTWACQHYLGFGILLSLPFVFVV 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
            GA G ++    ++   D      L    I   +    + +   ++              
Sbjct: 72  VGAIGWLIERTIVQRLYDRPLDTILATWGIGIMLQQLVRIVIGPESRFVSGPDFLRGN-- 129

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                         V+   +  +V+     +  +    L +T      R +  N+     
Sbjct: 130 ---------LEIGNVVMSNYRIFVIFFSIAVLLATWALLTKTEFGTKLRAVIQNRSISEC 180

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA  +   G+AG         I         +  +             
Sbjct: 181 YGIESKRIYSLTFAYGAGLAGIAGTLITPLFSTIPTMGTSLVVDAFL------------- 227

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   L  ++            + +      +      ++  + ++I +R   L   
Sbjct: 228 --VVIIGGLGSIIGAAAAAVMIGELTAMFSLVINDTLGRIGVLACVIVLIRLRPRGLFPE 285

Query: 343 RTP 345
            T 
Sbjct: 286 NTR 288


>gi|254439512|ref|ZP_05053006.1| amino acid or sugar ABC transport system, permease protein,
           putative [Octadecabacter antarcticus 307]
 gi|198254958|gb|EDY79272.1| amino acid or sugar ABC transport system, permease protein,
           putative [Octadecabacter antarcticus 307]
          Length = 288

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 90/303 (29%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   +Y +FA GLS++ G + L+++       +  +    +    GL   + + +
Sbjct: 7   LVQGILLGGVYTLFAVGLSLMFGIMRLVNIAHGDLIVLAGFFSYSIIQMTGLGPLVSLVI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                 A G ++    L        +  +I++     I+                     
Sbjct: 67  VVPAFFAFGYVLQAGILNRTLGDDLLPPMIVTFGLAIIIQNALLEGYSADSR-------- 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              ++  +       S  +   +F   +L        ++     RT +   +R   D+  
Sbjct: 119 -KLSLGEVETASFALSEGLAVGVFPLIILAVAVGTIVALQTLFYRTRLGREFRATSDDPA 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +          +  ++   IG+AG   A         +   +  +     VI+GG+
Sbjct: 178 AAQMMGIDTKRIFAISTGIALVVIGIAGVLMAVRTTF--EPLSGPTRLLFAFEAVIIGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L     +   ++                       +   LV+++R   
Sbjct: 236 GSIWGTLFGGIALGLAQAIGGAID--------------PQFQILAGHLLFLLVLVIRPQG 281

Query: 339 LLR 341
           L  
Sbjct: 282 LFP 284


>gi|15639673|ref|NP_219123.1| methylgalactoside ABC transporter, permease protein (mglC)
           [Treponema pallidum subsp. pallidum str. Nichols]
 gi|189025911|ref|YP_001933683.1| methylgalactoside ABC transporter, permease protein [Treponema
           pallidum subsp. pallidum SS14]
 gi|6016559|sp|Q57321|MGLC_TREPA RecName: Full=Galactoside transport system permease protein mglC
           homolog
 gi|1230603|gb|AAC44586.1| MglC [Treponema pallidum]
 gi|1255047|gb|AAC44750.1| MglC [Treponema pallidum]
 gi|3322983|gb|AAC65649.1| methylgalactoside ABC transporter, permease protein (mglC)
           [Treponema pallidum subsp. pallidum str. Nichols]
 gi|189018486|gb|ACD71104.1| methylgalactoside ABC transporter, permease protein [Treponema
           pallidum subsp. pallidum SS14]
 gi|291060052|gb|ADD72787.1| putative Galactoside transport system permease protein MglC-like
           protein [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 531

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 86/304 (28%), Gaps = 13/304 (4%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y  I         +  F   G   +   I ++  Q  + + +A G++ ++   G   L+ 
Sbjct: 200 YIAIAVFFIACIVVAPFSGNGNLLTIPNILTILEQSSVRMFYAVGVAGIILLAG-TDLSI 258

Query: 71  VIAYAIGAYSYVILGSRYGL---SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
               A+G+    I+            L       +  A  ++M L          ++   
Sbjct: 259 GRMVAMGSVVTGIILHPGQNIVTFFGLGPWDFTPVPMAVRVVMSLAVSVALCVSFSLFAG 318

Query: 128 IM-----SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
                     F + L     I            +  +   ++ L        +     + 
Sbjct: 319 FFSARLKIHPFISTLATQLIIYGVLFFGTSGTPVGSIDPYIKDLFGGRWILGTMQGTLVT 378

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
              +++      A       +T +      +  N +A      ++    +S FA+++ F 
Sbjct: 379 FPKLIIPATIAVAIAWFIWNKTILGKNMYAVGGNAEAANVSGISVFGVTMSVFAMAAVFY 438

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIV----ILGGMTSLSKIAKATAILIGVVELC 298
           G    F     +  +     +  + I   +V      GG+  L        I  G+    
Sbjct: 439 GFGAFFETFKANASAGTGQGYELDAIASCVVGGISFNGGIGKLEGAVVGVIIFTGLTYCL 498

Query: 299 CGMN 302
             + 
Sbjct: 499 TFLG 502


>gi|302526218|ref|ZP_07278560.1| ribose ABC transporter [Streptomyces sp. AA4]
 gi|302435113|gb|EFL06929.1| ribose ABC transporter [Streptomyces sp. AA4]
          Length = 329

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 96/299 (32%), Gaps = 21/299 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFL----GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++  +  L+ V    ++F               + ++   I    + A G+++V+   G 
Sbjct: 12  RFQSVFGLVLVFAAAIVFSPHRDGELVFLGSGNLFNVVRAISEIGIIAVGMTLVILVGG- 70

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+      + +    +L +  G  +   + +   +    G++ G+ S +FR     + 
Sbjct: 71  IDLSVGSVMGLASVGVALLLTSGGWGLVPGVLLVLALGFGFGLLQGIASARFRIQSFIVT 130

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
              M                        + +     T  S             +   +  
Sbjct: 131 LAGMQIA-----------RGIARMWSGGEGVSITYGTGPSQAPVPFSLLGERTFGGVVPI 179

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
             L    ++A  +L LR +A S     I  N+KA       +I  K+  F +      +A
Sbjct: 180 PALFFAVVAALAVLVLRASAFSRHVYAIGGNEKAAVLSGVPVIRVKVLVFGLCGLLAALA 239

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
           G   A   +   P+     E   + ++VI      GG  S+S       ++  +  +  
Sbjct: 240 GIVHAGQYNFGGPNDGTGYELNAIAAVVIGGTSLSGGRGSVSGTVAGALLVGVLDNILQ 298


>gi|39935346|ref|NP_947622.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009]
 gi|192290902|ref|YP_001991507.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|39649198|emb|CAE27718.1| possible ABC transporter, permease protein [Rhodopseudomonas
           palustris CGA009]
 gi|192284651|gb|ACF01032.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 291

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 92/265 (34%), Gaps = 12/265 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+++ G L +++      Y +GA+    L +  GL+ W  + +
Sbjct: 12  LLVGLINGSFYALLSLGLAVIFGMLNIINFAHGALYMMGAFCAYFLLNLLGLNYWWALIL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +I G  GM+M    L++      +  L+++     I+        G +G+  A     
Sbjct: 72  SPIIVGLFGMVMERTLLQWLSGLDHLYGLLLTFGVALIIQGVFQNYFGSSGLPYAIP--- 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                            F+   ++  +V++    +       + RT +    R   +N  
Sbjct: 129 -------EQLRGAINLGFMYLPVYRGWVVVFSLVVCLLTWFLIERTRLGAYLRAATENPT 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       + +      +AG   A         +      I+V ++V++GGM
Sbjct: 182 LVRAFGINVPRMITLTYGLGVGLAALAGVLSAPINQV--RPLMGADLIIVVFAVVVIGGM 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNF 303
            S+         L  V  L      
Sbjct: 240 GSIMGSIITGFALGVVEGLTKYFYP 264


>gi|296135329|ref|YP_003642571.1| inner-membrane translocator [Thiomonas intermedia K12]
 gi|295795451|gb|ADG30241.1| inner-membrane translocator [Thiomonas intermedia K12]
          Length = 298

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 96/305 (31%), Gaps = 19/305 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +  ++Y + A G  ++  + G+ +          A +   L       +  L+  
Sbjct: 8   IIAGLMSGVLYALIALGFVLIYKASGVFNFAQGAMVLFAALAMARLQEHMPWPLAFLLAF 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + M+  A  +   +       +        ++ +   + + +     G+           
Sbjct: 68  AIMVVLAWLIERLVLRHLINQE-------GVTLLMATLGVAYFLEGLGQMVWGDDIYPID 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           LG   +  I         ++              L A + L+ +++ +  A R + D+ +
Sbjct: 121 LGMPKQPTIMLQSLIPGGILVSNEDLIAAGSAAALVALLTLFFQKSGVGRALRAVADDHQ 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +    +  ++++     + G  + +               +  + +VILGG+
Sbjct: 181 AAQSIGIPLSRMWVIVWSIAGLVALVTGMIWGSKLGVQFSLS---LIALKGLPVVILGGL 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+    +L            ++   ++ +    L+          R   
Sbjct: 238 TSVPGAIVGGLIVGLGEKLAEVYLGPLLGGGIESWFAYLLALLVLLA---------RPQG 288

Query: 339 LLRLR 343
           L   R
Sbjct: 289 LFGER 293


>gi|116252202|ref|YP_768040.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115256850|emb|CAK07941.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 341

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 89/313 (28%), Gaps = 34/313 (10%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            +          + +    I ++ + + G + V+   G + L+     A+    +V   +
Sbjct: 20  AIINPRFLLPINLANTANLIGLFGILSIGQAFVI-ITGGIELSVGSLVALLGVLFVDFIA 78

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              +S  L +P+   +    G + G    +       +    +              T G
Sbjct: 79  VQDMSWMLALPLILALGAVIGAVHGWLITRLNLQPFVVTLCGLLIYRGAARFYTADGTAG 138

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                                 F             +    + +  ++  + + L R+  
Sbjct: 139 ----------------FAFGQNFPDLEFLTAGRFYGVPNTFIALVIIAVVMWIMLHRSVF 182

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                 I  N++A            +SA+ +      ++  +FA     ISP        
Sbjct: 183 GRYLYAIGKNEEAARYSGIRTARMVMSAYVICGLLTALSAIYFAMYTRSISPASHGQFYE 242

Query: 267 IIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           +  I+  +LGG        S+  +   T +L  +  L   +               ++  
Sbjct: 243 LYAIAAAVLGGFSLRGGEGSIVGVVLGTVLLQELQNLVNLL-----------GIPSSLNF 291

Query: 321 TTLMVIALFLVIL 333
             +  + L  V++
Sbjct: 292 AVMGGVILIGVLI 304


>gi|253682757|ref|ZP_04863552.1| ribose transport system permease protein RbsC [Clostridium
           botulinum D str. 1873]
 gi|253560956|gb|EES90410.1| ribose transport system permease protein RbsC [Clostridium
           botulinum D str. 1873]
          Length = 311

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 90/313 (28%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             L  +V  +++ +      S   I ++  Q+ +  + A G++ V+   G + L+     
Sbjct: 14  ALLGFLVLCVVMAILSPRFLSVANIKNVLTQVSVNAIIAIGMTFVI-LTGGIDLSVGSTL 72

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AI   +      +   +I++ I  + ++    G+  G+   K R                
Sbjct: 73  AISG-AVAATLIKGNCNIFVAIIAALVVGAIVGVFNGIFIAKGRIQAFIAT--------- 122

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L                  +  LG +  S+         F +      + +       
Sbjct: 123 --LATMTVFRGVTQVYTNGTPVSKLGESFGSIGNKELLGIPFPVVITIAVFFIAFYVLNQ 180

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                    T +      +  N+ +           K+  + +S     ++G    +   
Sbjct: 181 ---------TRLGRYIYALGGNEDSARLSGINTTKMKMLVYIISGVTAAISGIVVTSRIG 231

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             S       E   + ++V     + GG  S++       I+  +      +N   +  L
Sbjct: 232 SASAIAGTGYELDAIAAVVLGGTSLAGGEGSIAGTIIGALIIGVLNNGLNLLNVSPYYQL 291

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 292 IVKGLVILLAVMV 304


>gi|297566967|ref|YP_003685939.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
 gi|296851416|gb|ADH64431.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
          Length = 291

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 53/308 (17%), Positives = 108/308 (35%), Gaps = 26/308 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    Y + + GL+++ G L +++      Y +GA+   IL    G+   L + +
Sbjct: 10  VFNGLVNGAFYALLSLGLAVIFGMLRVVNFMHGALYMLGAFGAYILLQEVGIGFGLALIL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  GM++    L+       +  L+++      L     +  G  G       + 
Sbjct: 70  APLLVGMLGMLLERLLLRHLYALDPLYNLLLTFGLTLFLQDGMRLFFGIQGQPYGTPGWL 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                V+Y  +  +V+     +   +   L RT +    R   +   
Sbjct: 130 RGA----------VDLGVVVYPTYRLFVIGFSLLVCVLVWYALERTRLGMVVRAATERPD 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F   +A   +AG   A  R+     +      I V ++V++GG+
Sbjct: 180 LTRALGINVDRWITPVFGFGAALAALAGVLAAPMRNV--SPLMGADLIITVFAVVVIGGL 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++  V  L         N+              L+ I + LV+L+R   
Sbjct: 238 GSILGSVVAGFLVGVVTALGALFYPALANT--------------LVFILMALVLLLRPAG 283

Query: 339 LLRLRTPS 346
           L      S
Sbjct: 284 LFGNPEAS 291


>gi|82546115|ref|YP_410062.1| ribose ABC transporter permease protein [Shigella boydii Sb227]
 gi|81247526|gb|ABB68234.1| D-ribose high-affinity transport system [Shigella boydii Sb227]
 gi|320175230|gb|EFW50339.1| Ribose ABC transport system, permease protein RbsC [Shigella
           dysenteriae CDC 74-1112]
 gi|320186265|gb|EFW61001.1| Ribose ABC transport system, permease protein RbsC [Shigella
           flexneri CDC 796-83]
 gi|332089173|gb|EGI94281.1| ribose transport system permease protein rbsC [Shigella boydii
           3594-74]
          Length = 321

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 89/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                     
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGRVQ--------AFIATLVM 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L+          G         + T        F +        +     ++G+ FL+A
Sbjct: 134 MLLLRGVTMVYTNG-------SPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A       +   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGTIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|24115055|ref|NP_709565.1| ribose ABC transporter permease protein [Shigella flexneri 2a str.
           301]
 gi|30064943|ref|NP_839114.1| ribose ABC transporter permease protein [Shigella flexneri 2a str.
           2457T]
 gi|110807548|ref|YP_691068.1| ribose ABC transporter permease [Shigella flexneri 5 str. 8401]
 gi|24054317|gb|AAN45272.1| D-ribose high-affinity transport protein [Shigella flexneri 2a str.
           301]
 gi|30043204|gb|AAP18925.1| D-ribose high-affinity transport protein [Shigella flexneri 2a str.
           2457T]
 gi|110617096|gb|ABF05763.1| D-ribose high-affinity transport system [Shigella flexneri 5 str.
           8401]
 gi|281603153|gb|ADA76137.1| D-ribose high-affinity transport protein [Shigella flexneri
           2002017]
 gi|313647796|gb|EFS12243.1| ribose transport system permease protein rbsC [Shigella flexneri 2a
           str. 2457T]
 gi|332750764|gb|EGJ81172.1| ribose transport system permease protein rbsC [Shigella flexneri
           4343-70]
 gi|332751739|gb|EGJ82137.1| ribose transport system permease protein rbsC [Shigella flexneri
           2747-71]
 gi|332751956|gb|EGJ82350.1| ribose transport system permease protein rbsC [Shigella flexneri
           K-671]
 gi|332763989|gb|EGJ94226.1| branched-chain amino acid transport system / permease component
           family protein [Shigella flexneri 2930-71]
 gi|332997207|gb|EGK16823.1| ribose transport system permease protein rbsC [Shigella flexneri
           K-218]
 gi|333014075|gb|EGK33433.1| ribose transport system permease protein rbsC [Shigella flexneri
           K-304]
          Length = 321

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 89/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +     + +    +   + +                   Q 
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALTLGAAIGAVTGVIVAKGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        +     ++G+ FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A       +   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|39937095|ref|NP_949371.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009]
 gi|192292929|ref|YP_001993534.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|39650953|emb|CAE29476.1| possible ABC transport system permease protein [Rhodopseudomonas
           palustris CGA009]
 gi|192286678|gb|ACF03059.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 315

 Score = 62.2 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 104/318 (32%), Gaps = 26/318 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +  ++  + A GL+++   LG+L+      Y +GA+    +        W  + ++
Sbjct: 10  LNGVLYGMLLFLMASGLTVIFSMLGVLNFAHASFYMLGAFFGYQISR--WTGFWPALLIA 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++GA G  +    L+       +A L+ +      + +   I  G            +
Sbjct: 68  PLLAGAIGAAVERFGLRRVHRNGHVAELLFTFGLAFAIEEVVSIIWG---------KVPV 118

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                +L+ F  F      Y  +  ++L     +   +++ L++T I    +    +   
Sbjct: 119 DYRTPALLDFPAFTIFSTNYPAYKMFMLAVSVVIFVGLLVVLKKTRIGLIVQAALTHPHM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L   +    +  F V +A   +AG     S    S         + V+ +V    + 
Sbjct: 179 VAHLGHNVERIFMLVFGVGTALAAVAGVIAGPSLVTQSNMASLLGPILFVVVVVGG--LG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT-------------TLMVI 326
           SL     A+ ++  +      +N                                 +  +
Sbjct: 237 SLPGAFIASLLIGLLQTFAVSINASPATLFGPLGPDLAASWLNDIWNVTIAQIAPIMPYL 296

Query: 327 ALFLVILMRSHSLLRLRT 344
            L L+++ R   LL  R 
Sbjct: 297 LLVLILIFRPMGLLGTRE 314


>gi|294794726|ref|ZP_06759861.1| ribose ABC transporter, permease protein [Veillonella sp. 3_1_44]
 gi|294454088|gb|EFG22462.1| ribose ABC transporter, permease protein [Veillonella sp. 3_1_44]
          Length = 311

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 93/304 (30%), Gaps = 25/304 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            +++ +   +      + ++  Q+ I  + A+G++ V+   G + L+     A+ +    
Sbjct: 22  FVIISVMNDSFLEFSNLRNLLRQVSINAIIAFGMTFVI-LTGGIDLSVGSILALSSAVMA 80

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
                 G    L I ++A      G I GL     R                   +    
Sbjct: 81  -NLIVTGTDPVLAIVLAAGAGLVLGGINGLVITYGRVAPFIAT------------LATMT 127

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           I  G   ++         T       F +   + +       ++         ++   L 
Sbjct: 128 IYRGATLVFTDGNPISGLTQDPLFHGFGQGDIAGLPVPAITMFLAF------IALWFVLS 181

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           RT++      +  ++K  +     I   K+  +A++    G+AGA   +  +   P    
Sbjct: 182 RTSLGRKTYAVGGSEKVSYIAGIKIDRVKIFVYALTGMLCGIAGAIITSRLNSAQPTAGA 241

Query: 263 FSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             E   + ++V     + GG   +        I+  +      ++   F   +       
Sbjct: 242 GYELDAIAAVVLGGTSLAGGRGHIVGTLIGALIIGTLNNGLNILDVSSFYQQVVKGIVIL 301

Query: 318 MRHT 321
           +   
Sbjct: 302 LAVL 305


>gi|260463027|ref|ZP_05811230.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
 gi|259031148|gb|EEW32421.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
          Length = 337

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 92/309 (29%), Gaps = 13/309 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L      ++  +   +      + ++  QI I  + A G++ V+ + G + L+     A
Sbjct: 24  LLFLAALVVVFTVLKPSFIDPINLFNITRQISITGLIALGMTFVILTAG-IDLSVGSLLA 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                  ++             +S   SG  G       L       A   +    I + 
Sbjct: 83  FCGMVAAVVAKGGT-----ANTLSLSTSGTQGFGWFAALLAAVVVGAAAGGVQGLAITRL 137

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +  +     G             G  +       R+  + +I  + +  ++     +  
Sbjct: 138 KVPPFVVTLGGLTVFRGLTLTISNGGPISGFDASMRWFGTGLIGPVPVPALIFAAAAILC 197

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I+L   R     A   +  N +A       +    +S + +   F G+A    +A  + 
Sbjct: 198 HIVLRYTR--YGRAVYAVGGNAEAARLSGLRVDRILVSVYVIVGFFAGLAAFVLSARLNS 255

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                    E  ++ ++VI      GG+ S+       A++  +       N   +   +
Sbjct: 256 SEAVAGIGYELTVISAVVIGGTSLFGGIGSVGGTVVGAALIGVLQNGLQFNNVSSYTQSI 315

Query: 311 KFDCSFNMR 319
                  + 
Sbjct: 316 VIGLILILA 324


>gi|296531816|ref|ZP_06894630.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
 gi|296267858|gb|EFH13671.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
          Length = 329

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 67/344 (19%), Positives = 130/344 (37%), Gaps = 29/344 (8%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
             R  +       LA +    L +        +Y       +L YV+ A   +I+ G  G
Sbjct: 14  PRRPRRLGHAGFWLASMAFGALVILALGALGSEYAYFAATFVLQYVVLATAWNILGGYAG 73

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            ++      +A GAY+ V  G   GL +   I ++A++ GA G   GL +L+ RG Y AI
Sbjct: 74  YVNFGAAAFFAAGAYTTVAAGKAMGLGLLPCIGLAALVGGALGFGTGLLTLRLRGAYFAI 133

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           ATL ++ + Q  +  W  +   +    +  R                 P  F  Y  F+ 
Sbjct: 134 ATLCLAVVLQTAVTNWNYVGGSRGAYVLRPRE---------------VPFGFESYGAFLC 178

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            V + +   + ++   +  + +      +RD++ A  +     +  KL A ++S A + +
Sbjct: 179 AVAVVLAVAAVALARSIETSRLGLGLAALRDDEAAAEAAGVPTLRLKLIATSISGAMMAV 238

Query: 245 AGAFFAASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           AGA        + P+  F  +  +  I++ ++GG  S +       +L  + +       
Sbjct: 239 AGAPLPYLGSYVEPNSAFGLAYAVNAIAMPLIGGTASWAGPLIGAVLLASLQQAATVTIS 298

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
              N               ++ + L L + +  H ++ L     
Sbjct: 299 SAVN-------------LMIVGVVLVLFVCLAPHGIIGLFRRRA 329


>gi|90407828|ref|ZP_01216005.1| ribose transport system permease protein RbsC [Psychromonas sp.
           CNPT3]
 gi|90311093|gb|EAS39201.1| ribose transport system permease protein RbsC [Psychromonas sp.
           CNPT3]
          Length = 327

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/296 (10%), Positives = 74/296 (25%), Gaps = 25/296 (8%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             +   I ++  Q  +  + A G+++V+ + G + L+     A+       +        
Sbjct: 46  FFTLNNILNILRQTSVIAILAAGMTLVILTAG-IDLSVGSILALCGAFSATMIGLEISVF 104

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
             +            M   + +                + F   L+    +         
Sbjct: 105 IAVPVSLFAGLVLGSMTGMIIAK------------GKVQAFIATLVTMTLLRGVTMVYTD 152

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
              +    T V  +   F       I        L+ +             T        
Sbjct: 153 GRPISTGFTDVADVFSLFGTGYFLSIPIPVWLMALVFLSIWYLL-----NHTRFGRYIYA 207

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +  N+ A       +   K+  +A+      +AG    +      P        +  I+ 
Sbjct: 208 LGGNESATQLSGINVAKVKVGVYAICGLLAALAGIIITSRLSSAQPTA-GMGYELDAIAA 266

Query: 273 VILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           V+LGG         +        I+  +      ++   +  ++       +    
Sbjct: 267 VVLGGTSLAGGKGRIMGTLVGALIIGVLNNALNLLDVSSYYQMIVKAVVILLAVLV 322


>gi|227818357|ref|YP_002822328.1| ribose ABC transporter [Sinorhizobium fredii NGR234]
 gi|227337356|gb|ACP21575.1| putative ribose ABC transporter [Sinorhizobium fredii NGR234]
          Length = 348

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 86/309 (27%), Gaps = 14/309 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   + L L      S      +   + I  + A G++IV+   G + L+    +A
Sbjct: 36  AIFLIALVITLSLVSPNFLSVGNFLDIARVVSIIGIMAVGMTIVI-LTGGIDLSVGSTFA 94

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +          G        ++ ++     ++ GL      G                
Sbjct: 95  LASVVAA--SLIPGSFSDAPRILAFVLPVPFAILAGLLVGAAVGFINGFIIAKSRVEPFI 152

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +       G   ++                 F +     +      + +++       
Sbjct: 153 VTLATMAFVRGLTYLFTGGFPTIFRPMPPLFEWFGQGYVFGLPTPTIFFALVV------L 206

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +   RRT    +   I  N++A       +   K+ A+ +  A   ++G   A+    
Sbjct: 207 IGVWITRRTTFGRSIYAIGGNEEASRLSGIKVQSIKIWAYTLMGALAALSGIILASRVGA 266

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E  ++  +VI     LGG  S+        IL  +           +   +
Sbjct: 267 AQPTAGLTYELDVIAGVVIGGTSLLGGRGSIMSTVLGVFILGVISNGLNIAGVPTYYQYV 326

Query: 311 KFDCSFNMR 319
                    
Sbjct: 327 VKGLLLISA 335


>gi|163757660|ref|ZP_02164749.1| inner-membrane translocator [Hoeflea phototrophica DFL-43]
 gi|162285162|gb|EDQ35444.1| inner-membrane translocator [Hoeflea phototrophica DFL-43]
          Length = 345

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 50/344 (14%), Positives = 107/344 (31%), Gaps = 52/344 (15%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-------------- 84
           I +   +   Y + A GL+++ G+LG+++      + IGA+  VI               
Sbjct: 10  ILNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFCAVIFSRILSLSTVTEDPT 69

Query: 85  -------------------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
                                          S+ L I ++  +    G+ M    +K+  
Sbjct: 70  RKDFLGNPLKIETPYVESWFGPELGSVLINWSVPLSIILAIPVMILVGLAMERGLIKYFY 129

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
                  ++++     +L +      G   I       F G+            +  +IY
Sbjct: 130 KRPHADQILVTFGLAIVLQEIIKYFFGANPIPTPAPDVFAGSFDFGA--LIGLEAGQIIY 187

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
             +          + A++  +L+ T      R    +++    L   I       FA+++
Sbjct: 188 PYWRLVYFAFAAAIIAAVFSFLQFTTFGMVVRAGMADRETVGLLGINIDKRFTIMFAIAA 247

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
              G+AG  +             F     V+ +V    M SL     A  +L  +     
Sbjct: 248 VVAGLAGVMYTPINSPNYHMGMDFLVLSFVVVVVGG--MGSLPGAVLAGFLLGILES--- 302

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                 F S+ +        +  ++ +   +++L R   L+  +
Sbjct: 303 ------FASMAQVLSVVPGINQIIIYLVAIVILLTRPRGLMGRK 340


>gi|332528491|ref|ZP_08404479.1| ABC transporter permease [Hylemonella gracilis ATCC 19624]
 gi|332042002|gb|EGI78340.1| ABC transporter permease [Hylemonella gracilis ATCC 19624]
          Length = 297

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 96/308 (31%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL++V G + +++L     +  GAY              +    
Sbjct: 1   MLNGIGYGLMLFLLAAGLTLVFGIMDVMNLAHGSLFMGGAYVAAQ----------VHTSS 50

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            + ++G    +  +  +    + L +  L   +    +L  +  I      + +      
Sbjct: 51  GSFLAGLLAALAVVLLVALALEALLVRHLYGRDHLAQVLATFGIILVADDAVKMIWGPAP 110

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L  +  + +         + Y  +   +L     ++  + L +  T +    R    N+ 
Sbjct: 111 LMASSPTALVEPIEVLPGLPYPSYRLLILGVGLLVALGLYLLVNHTRVGMLVRAGASNRA 170

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + +A   +AGA                   I  + ++++GG+
Sbjct: 171 MAEFMGVRVGRVFSGVFLLGAALAALAGALMGP--ITAVQVGMGEEILIPALVVLVIGGI 228

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT---TLMVIALFLVILMR 335
            S+     A  ++  V             ++L      ++        M   +  V+  +
Sbjct: 229 GSVRGAFIAALLVGLVDTCGRAFVPMALRAVLPPAAVSDVAPLVAGLAMYALMATVLAFK 288

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 289 PAGLFPAR 296


>gi|283783766|ref|YP_003374520.1| amino acid or sugar ABC transport system, permease protein
           [Gardnerella vaginalis 409-05]
 gi|298252971|ref|ZP_06976763.1| ribose/xylose/arabinose/galactoside ABC-type transporter, permease
           component [Gardnerella vaginalis 5-1]
 gi|283441655|gb|ADB14121.1| amino acid or sugar ABC transport system, permease protein
           [Gardnerella vaginalis 409-05]
 gi|297532366|gb|EFH71252.1| ribose/xylose/arabinose/galactoside ABC-type transporter, permease
           component [Gardnerella vaginalis 5-1]
          Length = 333

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 90/310 (29%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++    L     A  +   I ++GIQ     + A+G + V+ S G + L+     
Sbjct: 34  ALIGLIILCAALSCATPAFLTSVNILNVGIQAATVAILAFGQTFVIVSAG-IDLSVGAVA 92

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AI +      G   GL   L + V  +     G+I G+ +   +                
Sbjct: 93  AISSMLVAYTGVSMGLPPVLTVVVGIVTGALFGLISGVANAFLKLPSFI----------- 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +    I      + F    + +   ++ M  + 
Sbjct: 142 -----------ATLAMMSVARGLTLVVSDGRPISTSGMVNFFGAKILGIPMPIVMMIIMG 190

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L  T    +   +  N +A       I   ++  F  S  F  +AG   A    
Sbjct: 191 VIAAVILNFTTTGRSMYAVGGNMEASRLSGINIHKTQIMVFVFSGIFAAIAGLVIAGRLH 250

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + S+VI      GG   +S       +L  +      +N   F   
Sbjct: 251 SAQPQAAAGYEMDAIASVVIGGASLSGGKGKISGTFVGAILLAVIRNGLNILNVSSFWQQ 310

Query: 310 LKFDCSFNMR 319
           +         
Sbjct: 311 VVIGLVIAFA 320


>gi|153010133|ref|YP_001371347.1| monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC
           49188]
 gi|151562021|gb|ABS15518.1| Monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC
           49188]
          Length = 337

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 100/321 (31%), Gaps = 22/321 (6%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R    D  + L  ++  L+  +      +      + +QI I  + A G++ V+   G +
Sbjct: 22  RFLLRDAGVFLALILITLVFSVTAPYFATSGNALKIFVQIAINTVLAAGMTFVI-LTGGI 80

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+      ++ +       L IP++ +   A G + G  + K    +   + 
Sbjct: 81  DLSVGSVLALCTVVGALIMTSGLE-PALSIPLAVLACIAVGGLCGFINGKVSTYWKIPSF 139

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           ++   +        + ++N                +  + +         +I   F+  +
Sbjct: 140 IVTLGMLNIAAGAARVVSN---------------NSTITGLPQGFVDFGNLIVGGFLPSI 184

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            L    + A     LR T        +  N +A           K++AF +S    G+A 
Sbjct: 185 FLIAVAVIAVGWFVLRFTVFGRMIYAVGANDEAVRLSGHNPDTYKIAAFVISGVTAGIAA 244

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
             +    +  SP      E   + +++I      GG  S+        IL  +      +
Sbjct: 245 IVYLLRLNIGSPIAGVGYELNAIAAVIIGGTSLFGGKGSIVGTLAGACILQVLATGLQLL 304

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
                   +       +    
Sbjct: 305 GIGDNYKPIIIGTVIILAVIV 325


>gi|217966824|ref|YP_002352330.1| sugar ABC transporter ATPase [Dictyoglomus turgidum DSM 6724]
 gi|217335923|gb|ACK41716.1| Monosaccharide-transporting ATPase [Dictyoglomus turgidum DSM 6724]
          Length = 328

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/330 (12%), Positives = 102/330 (30%), Gaps = 17/330 (5%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           +SI   +      ++     +  +   L      + + I ++ +   +  + A G++ V+
Sbjct: 5   LSILFSKSGLRQILMFASLFLLFVFFSLASPNFLTYENIIAILLATCVNGLLALGVTFVI 64

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
              G + L+      I A    +  + + + +++ +    +     G I G    K +  
Sbjct: 65  -ITGGIDLSIGTVMTISAVMTGVFITFWRIPVFIGVLGGILTGVLAGFINGTVISKMKLP 123

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
                  +M                    +     +YF  T + + I             
Sbjct: 124 PFIATLGMMMIA-----------KGLALVVSGCRPIYFNDTPIFNKIAMGSILGRIFPGL 172

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
                 +L          + L RTA+      I  N++A       +   K   +++   
Sbjct: 173 GDFPNAILWFVLFIIIAHILLTRTALGRYTFAIGSNEEAARLSGLNVDKWKTIIYSLCGM 232

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVV 295
           F+G+AG   A+  +   P + +  E   + ++VI      GG  S+        I+  + 
Sbjct: 233 FVGIAGVIMASRLNSAQPALGQGYELDAIAAVVIGGTSLRGGEGSVIGTVIGALIMSTLT 292

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
                ++      ++             ++
Sbjct: 293 NGLRILSVPQEWQIVVSGIIVIGAVYLDII 322


>gi|161525072|ref|YP_001580084.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
 gi|189350185|ref|YP_001945813.1| branched-chain amino acid transporter permease [Burkholderia
           multivorans ATCC 17616]
 gi|160342501|gb|ABX15587.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
 gi|189334207|dbj|BAG43277.1| branched-chain amino acid transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 405

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 58/303 (19%), Positives = 104/303 (34%), Gaps = 12/303 (3%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +                 +       Q  +     Q    V+ A   ++ +G+ GLLS  
Sbjct: 2   RSGPFAVFARWALFAGCLVLPAWLWPQGAVLGYLAQTASLVVLALSYNLQLGTTGLLSFG 61

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +GA++     +R+G S+ LL  V        G I GL + +  G   A+ TL +
Sbjct: 62  HAAFAGLGAFAAAHWFNRFGGSLPLLPLVGGAAGAGFGFIAGLLATRRAGTAFAMITLGL 121

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            E              G  G+ +                   +        +  Y V+  
Sbjct: 122 GECVAAAAWSVPAWFGGIGGVPI------------DRASGTPWGGWQFGAPVQAYAVIAA 169

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
            C +SA  +  L RT ++     +RDN     +L T     +L+    +S F G+AG   
Sbjct: 170 WCIVSALAMRALTRTPLARLANAVRDNPARVAALGTDPRRVRLAMVTCASFFAGIAGTLT 229

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
               +  +PD    + +  V+   ++GG  +    A   A+L  +  +  GM+  +   L
Sbjct: 230 LIDVEIATPDSVSMARSASVLIAAVIGGTGAFFGPAAGAAVLTALSVVVAGMSRAWALYL 289

Query: 310 LKF 312
              
Sbjct: 290 GVL 292


>gi|319780257|ref|YP_004139733.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166145|gb|ADV09683.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 331

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/343 (12%), Positives = 105/343 (30%), Gaps = 34/343 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           ++K D  L +L +V   ++ +          + +    I ++ + + G + V+   G + 
Sbjct: 1   MSKKDLGLLILILVVGAIVAIINPRFLLPINLANTSNLIGLFGILSIGQAFVI-ITGGIE 59

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+    ++   +   +   L   +   +    G++ G    + +     +   
Sbjct: 60  LSVGSVVALLGTLFIDFIAVREVGWPLAFVLILFLGAVIGLVHGWLITRLKLQPFVVTLC 119

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +        +      +G AG         L                 +I    + +V+
Sbjct: 120 GL---LIYRGVARFYTADGTAGFAFGQNFPELEFLTAGRSWGVPNSFIALIVISIVMWVV 176

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L              R+        I  N++A            ++A+ +      ++  
Sbjct: 177 L-------------HRSVFGRYLYAIGKNEEAAKYSGIRTGRVVIAAYVICGVLTALSAI 223

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGM 301
           +FA     ISP        +  I+  +LGG        SL  +   T +L  +  L   +
Sbjct: 224 YFAMYTRSISPASHGQFYELYAIAAAVLGGFSLRGGEGSLIGVILGTVLLQELQNLVNLL 283

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                          ++    +  + L  V++ +   + R R 
Sbjct: 284 -----------GIPSSLNFAVMGGVILIGVLVDQQWGVFRERR 315


>gi|294853812|ref|ZP_06794484.1| ribose transport system permease [Brucella sp. NVSL 07-0026]
 gi|294819467|gb|EFG36467.1| ribose transport system permease [Brucella sp. NVSL 07-0026]
          Length = 430

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 84/279 (30%), Gaps = 24/279 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +    +         +      M   + I+ + A G+ ++V   G + L+     
Sbjct: 31  AFFALIAIIAVFSFLSPYYFTVDNFLIMSSHVAIFGLLAIGM-LLVILNGGIDLSVGSTL 89

Query: 75  AIGAYSYVILGS---------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
            +       L                +W ++ ++  +    G + G+     R     +A
Sbjct: 90  GLAGVVAGFLMQGVTLQEFGIILYFPVWAVVLITCALGAFVGAVNGVLIAYLRVPAF-VA 148

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL +    + + +             + + L +     R  +    F          +  
Sbjct: 149 TLGVLYCARGVAL------------LMTNGLTYNNLGGRPELGNTGFDWLGFNKLFGVPI 196

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            +L +  L+    + L RTA          N++A       +   K+S + +S     +A
Sbjct: 197 GVLVLAILAIICAIVLNRTAFGRWLYASGGNERAAELSGVPVKRVKVSVYVISGICAAIA 256

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
           G   ++      P     +  +  I+ V++GG       
Sbjct: 257 GLVLSSQLTSAGPTA-GTTYELTAIAAVVIGGAALTGGA 294


>gi|289548490|ref|YP_003473478.1| urea ABC transporter permease UrtC [Thermocrinis albus DSM 14484]
 gi|289182107|gb|ADC89351.1| urea ABC transporter, permease protein UrtC [Thermocrinis albus DSM
           14484]
          Length = 355

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 95/312 (30%), Gaps = 14/312 (4%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             L +           Y   +  + L   + A G+S + G + +LSL   + + +GAY+ 
Sbjct: 14  LFLFMVFLSITPALPDYYIVILGKYLSLAIVAIGISWIWGHMNILSLGQGLFFGLGAYAM 73

Query: 82  VIL----GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI----- 132
            +      +  G     ++                    F   +L    L +        
Sbjct: 74  AMHLKLKATPSGDLPDFMLWSGLTTLPWWWQPFSNIVFVFMTIFLIPTLLAVVFSYIMFK 133

Query: 133 -----FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                    LI    +   +  +            + +   F  +      ++  + ++ 
Sbjct: 134 REISGVYFALISQAAVAIFEILLISLQPYTGGFNGLTNFGPFLIWYIGDNGFQRGLLFIT 193

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             + F    +   +  + I    R IRDN+          ++ K+  FA+S    G+ GA
Sbjct: 194 EFIVFSLILLSFIVENSRIGKLIRAIRDNENRLKFFGYNTVYFKIIVFAISGTLAGIGGA 253

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            F      ISP +     +I +I  V L G  +   +  +   +  + +        ++ 
Sbjct: 254 LFTLFNGSISPSLVGVMASIEMILWVALAGRENFLAVVLSVIGINLIKDKISSYFPNFWL 313

Query: 308 SLLKFDCSFNMR 319
             +       + 
Sbjct: 314 YFIGIAYIVIIL 325


>gi|302543084|ref|ZP_07295426.1| ribose transport system permease RbsC [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302460702|gb|EFL23795.1| ribose transport system permease RbsC [Streptomyces himastatinicus
           ATCC 53653]
          Length = 337

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 87/312 (27%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      +      +   +  +  Q+++    A G ++++ + G + L+C    A
Sbjct: 35  LVALLLACAFFSVSTTQFLTGGNLSLIVQQVMVVGTLAIGQTLIILTAG-IDLSCGAVMA 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            G+     + +   +     I +  ++    GM+ G    K       +   +++  F  
Sbjct: 94  FGSIVIAKMAAEGTVPPLAAIALGLIVCAGFGMLNGALVKKIPLPPFIVTLGMLNVAFAL 153

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             I                      T             +F + +  + Y  L    L  
Sbjct: 154 THIY-----------------SEEQTVSSLPGPLTALGQTFPLGKTDITYGSLVTIALFL 196

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L  T+       + ++ +A            +  + V+    G+A     +    
Sbjct: 197 LLAYSLSSTSWGRHVYALGNSPEAARLNGIRTSRLAIGVYTVAGLMYGIAALLLISRTGV 256

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P   +      + ++V+      GG  S+        I+         M        L
Sbjct: 257 GDPQAGQTDNLDSITAVVLGGTSLFGGRGSVLGTFIGVLIVGVFRNGLQLMGVASIYQTL 316

Query: 311 KFDCSFNMRHTT 322
                  +  T 
Sbjct: 317 ITGILVILAVTV 328


>gi|170748234|ref|YP_001754494.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
 gi|170654756|gb|ACB23811.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
          Length = 291

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 90/305 (29%), Gaps = 20/305 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G +++ G  G+L+L       + A +     + +GL  +    +
Sbjct: 7   LVDGFAISALYALGAMGFTLIFGVSGVLNLTHGALMVMAAVAAWAASALFGLGSYAGAAI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +   A  ++                +  +    + I +    +  G     +    + 
Sbjct: 67  GILCGLAGALVTYFAV-----VAPIERSRAIPREEKEIFVLTGTLLWGIMIQELVAYFFT 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    F  + V       +  +    +   + L++ R            N +
Sbjct: 122 DNPKTVLPIVEGVFEIAGVRTPRNQVFTAVVCWIVIGLLWLFVNRARAGKVLLAASMNPR 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +    ++ +A+     G AG          S  +   +      SIV+LGG+
Sbjct: 182 GVTLLGHDMGKIYVAVWAIYGLLAGTAGVLLGMFLGVSSYSVGPLT--ASAFSIVVLGGL 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++    A  ++  +      +                       ++ L  V+ +R   
Sbjct: 240 GSVTGSLIAAYVVGYLETATAYLIS-------------PAYRVIPALLLLVAVMYLRPQG 286

Query: 339 LLRLR 343
           LL  R
Sbjct: 287 LLGRR 291


>gi|296109123|ref|YP_003616072.1| inner-membrane translocator [Methanocaldococcus infernus ME]
 gi|295433937|gb|ADG13108.1| inner-membrane translocator [Methanocaldococcus infernus ME]
          Length = 341

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 64/335 (19%), Positives = 110/335 (32%), Gaps = 50/335 (14%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--------------------- 80
           + +   IY + +  L++  G  G+ +    ++  +GA +                     
Sbjct: 8   ILLWFGIYYIVSSSLNLEFGYAGIPNFGKALSVLVGAIAVGGILNRLLILYFNTKGSLVE 67

Query: 81  ------------YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                                L +   I ++ +     G I  LPS K + DYL +  L 
Sbjct: 68  ASTYAVSNINQIIAHDPLMGFLILIASIILAVICGMIVGAIFILPSAKLKEDYLGVTLLA 127

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +SE    I I    I  G  G+ V D L F+   +R                     ++L
Sbjct: 128 ISETIFLISIYDLNIVGGYFGLSVPDVLAFIPGDLRLWAFIG---------------IVL 172

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            M FL       L  T      + +R+N     +    I+  ++ A A+ S    +AGA 
Sbjct: 173 FMAFLVYLFFERLLNTPFGRVLKAMRENDNTVKAFGRDIMMLRIKAMAIGSGVGAIAGAL 232

Query: 249 FAASRDRISPDMFKFSEN-IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
           +      I  + F  +E       +V+LGG  +   I   T I +    L      Y   
Sbjct: 233 YVLYTANIVANSFTRTEWTFFPFLMVLLGGKGNNKGIIVGTLIYVIFKVLL-DYYKYDIK 291

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +LL            L  + + L++  +   LL  
Sbjct: 292 NLLHIPFEPVWFSYILFGVIMLLILYYKPDGLLPE 326


>gi|186472319|ref|YP_001859661.1| monosaccharide-transporting ATPase [Burkholderia phymatum STM815]
 gi|184194651|gb|ACC72615.1| Monosaccharide-transporting ATPase [Burkholderia phymatum STM815]
          Length = 353

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 90/297 (30%), Gaps = 23/297 (7%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           L      + + +  + + + I  +   G+++V+  +  + L+      I AY+   L   
Sbjct: 53  LARPQFLNLQNLRDVLLNVSIISLLTAGMTVVI-LMRHIDLSVGSTVGISAYAVGSLYVA 111

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
           +     LL  ++ +  G     +    +        +ATL    IF+     W       
Sbjct: 112 FPHMPVLLALLAGVAIGLTAGGINALLIAVGRVPSLVATLSTLYIFRGADYAWVH----- 166

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                            SL   +   ++  +  I    ++  +   + S  L   R    
Sbjct: 167 ----------GGQINATSLPEAYSRLATGTLLGIPTLALIAAVVLFALSFYLKQFRA--G 214

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF-----K 262
                I  N +A       +    +S F +S A  G AGA + A    +          +
Sbjct: 215 REHYAIGSNPEAARLAGIDVERRVMSGFMLSGAIAGFAGALWLARFGTVDASTAKGIELQ 274

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                +V S+ I GG+ ++        +L  +      ++   F             
Sbjct: 275 VVAAAVVGSVAITGGVGTVLGATLGALVLGVISIALVVLHVSPFWEQAIEGALIVAA 331


>gi|284044193|ref|YP_003394533.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283948414|gb|ADB51158.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 339

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/325 (13%), Positives = 96/325 (29%), Gaps = 31/325 (9%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYI-----DSMGIQILIYVMFAWGLSIV 59
              L +   +   LAVV+PL++ +      +  ++       +   +    + A G +++
Sbjct: 21  PAPLRRLAAVQQPLAVVFPLIVAVIAFGLANDAFLGYANLVLILNTLAFVGIVAVGQTLL 80

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           +   G   L+     A+  Y    L    G  +     V+ +I  A G++ GL + +   
Sbjct: 81  IA-CGEFDLSVGAVAALSGYVAADLTVNSGWPLVGGFAVALLIGVAFGLLNGLVTTRLGV 139

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
                           + I    +     G+ +            +           ++ 
Sbjct: 140 P-------SFIVTIGTLYIGRGLVDFLAHGMTIFPLPEAWSEFGSTKFNRISVIVIVLVV 192

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
            + +    L             RRT           N +A  ++       KL AF +  
Sbjct: 193 LVLIGEFTL-------------RRTLFGRKLLATGANPEAARTIGIDPRRVKLQAFVLMG 239

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGV 294
               +AG   AAS     P + +  E + + ++VI      GG  ++         L  +
Sbjct: 240 VLAAVAGLLQAASLGTGDPAVGRSWELMSIAAVVIGGTSLFGGSATVVGTLVGIVTLQVI 299

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMR 319
                 +        +       + 
Sbjct: 300 SNGVVSLGLETNWQTVVIGLLMIVL 324


>gi|254459772|ref|ZP_05073188.1| inner-membrane translocator [Rhodobacterales bacterium HTCC2083]
 gi|206676361|gb|EDZ40848.1| inner-membrane translocator [Rhodobacteraceae bacterium HTCC2083]
          Length = 288

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 87/305 (28%), Gaps = 23/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +    Y + A GL++  G   +++L       +GA +   L +   +S  L + +
Sbjct: 5   LVSGLLLSGTYALVAMGLNLQYGVARIMNLANGEVLVLGALAAFWLYTTAQISPILTVIL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++     ++    L            +  +              G + I++   +  
Sbjct: 65  VIPVAFIGNWLIYRFLLTPLVRRSKTQGALEVDSILATF--------GMSFIFIGIMVSI 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                    +      L    ++  + +WL  +    A R +  + +
Sbjct: 117 EGGFFFYKYLSEPIQILGSTTSLNRLVAFLIAVLIAVGLYIWLHYSRPGVAVRALSVSTE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +      AFA+      + GA  +                +  + IVI+GG+
Sbjct: 177 ASGLVGINVPRVSALAFALGGTITAVGGALISTFITL--DASIGVVFTLKALIIVIMGGV 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +     A  IL  V      +                            +++L R   
Sbjct: 235 GEIRGAIVAAIILGLVETGVATLIDPGLTLAAA-------------YFIFVMILLFRPQG 281

Query: 339 LLRLR 343
           L   R
Sbjct: 282 LFGRR 286


>gi|306835432|ref|ZP_07468450.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Corynebacterium accolens ATCC 49726]
 gi|304568668|gb|EFM44215.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Corynebacterium accolens ATCC 49726]
          Length = 313

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 97/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  +   + LF+      +   + ++GIQ     + A+G++ V+ + G + L+     
Sbjct: 15  ALVGLIALCIALFIATPYFLTVANLLNVGIQAATVAILAFGMTFVIVTAG-IDLSVGSVA 73

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GA     + S  GL  WL + +   +    G I G+ +   +                
Sbjct: 74  ALGAMVSAYMFSNAGLPGWLTLLIGLFVGALAGAICGMATAWGKIPSFI----------- 122

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  S I      ++F          ++ M    
Sbjct: 123 -----------ATLAMMSIARGITLVISQGSPIETAPTVNAFGGDVFGFPVPIIMMVIAG 171

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N +A       +   +++ FA+S  F   AG   A   +
Sbjct: 172 VICWFILERTVLGRSMYAIGGNLEAARLSGLPVRRIQIAVFALSGFFAAWAGMVMAGRLE 231

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG    +       +L  +      +N   F   
Sbjct: 232 SAQPQAGTGYELDAIAAVVIGGASLSGGQGKATGTLVGAILLAVIRNGLNLLNVSSFWQQ 291

Query: 310 LKFDCSFNMR 319
           +       + 
Sbjct: 292 IVIGSVIALA 301


>gi|293607567|ref|ZP_06689901.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292814000|gb|EFF73147.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 306

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 91/294 (30%), Gaps = 16/294 (5%)

Query: 53  AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112
           A GL++V G +  ++L     Y +GA+    +    G  +     V   ++    ++  +
Sbjct: 24  AAGLTLVFGIMNFINLAHGSLYMMGAFIAATVFRHTGSFLLAGAAVIVGMAALGFLLDRI 83

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
              +          L             + I                 +           
Sbjct: 84  ALARLYPRDHLDQVLATFGFILFFNELTRIIWG-----------PAPISMGLPSWLSGTI 132

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
               V Y ++ + +++    ++    + + RT +    R    ++    +L   I     
Sbjct: 133 DILGVTYPLYRFLIIVVGLLVAGGCYVLIHRTRLGMLIRAGSTDRMMVGALGVNIARLNT 192

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             F + +   G+AG                    I+ + ++++GG+ S+     A  ++ 
Sbjct: 193 LLFVLGAVLAGLAGLMAGPILSA--QTGMGEPILILTLVVIVIGGIGSVRGAFLAALMVG 250

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHT---TLMVIALFLVILMRSHSLLRLR 343
            +  L   +      + L    +          L+ + + LV+ +R   L  ++
Sbjct: 251 LIDTLGRALLPTLLRATLPPAAANAAGPAIASMLIYVVMALVLALRPQGLFPVK 304


>gi|288918155|ref|ZP_06412511.1| inner-membrane translocator [Frankia sp. EUN1f]
 gi|288350431|gb|EFC84652.1| inner-membrane translocator [Frankia sp. EUN1f]
          Length = 732

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 92/302 (30%), Gaps = 13/302 (4%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLI 96
           +  S      IY + A GL++   + G+ ++       I A++Y  +       +   L+
Sbjct: 7   FTISGLTTAGIYAITASGLTLTYVTTGVFNVAHGATGMIAAFAYWQLRVGWGWPTPVALL 66

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +++ A G+++    ++          L+ +      L+         +        
Sbjct: 67  LCVCVLAPALGILIERLVMRRLDGTSPTTRLMATVALLVSLLSAAQWIWDPS-------- 118

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +  L        + V        VL     ++A +   L  T +  A R + D+
Sbjct: 119 --DFRALSELFPGSGVTVAGVAVPYDDVLVLGLAALVAAGLWALLHFTRVGVAMRAVVDD 176

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +                A+A+ ++   +AG   A         +      +   +  ++G
Sbjct: 177 RTLTVLNGARPTATSRLAWAIGTSLAALAGILVAPKLTL--SAIPLTLLIVNAYAAAVIG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ SL        ++    +   G                 +    ++ +AL ++   R 
Sbjct: 235 GLRSLPLTFVGALVVGLAGDYGIGYLPKIHTGAQYLTGLVAIIPVVVLALALLVLPSSRP 294

Query: 337 HS 338
             
Sbjct: 295 RG 296



 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 10/277 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               +V   LL   +  T   +       Q+    +    +  +VG  G  SL  +    
Sbjct: 313 AAGLLVAGTLLGAAIAVTTVTEADLFSSTQMWGLGIVGLSVVPLVGYAGQTSLCQLSFAG 372

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IGA      G+       L + ++A ++   G ++ LP+L+  G YLA+ T   +     
Sbjct: 373 IGAVVVAHAGADGN---PLSLLLAAAVTALVGALVSLPALRLSGIYLALLTGAFAVALDG 429

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            + +        A   +  R    G    +  RF  F         +  +  +  C +  
Sbjct: 430 WIFQL------PAFTVLGHRFDLFGAGSLTFTRFHAFGLDTAGTRPYFVFGAVVFCLVIL 483

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++   RR+ +       +++  A  ++   +    L+ F +S+A  G+ G  +AA    
Sbjct: 484 GLVGL-RRSDLGQRLIARKESPTACATIGVNLRTTNLAVFTLSAAIAGLGGGIYAAGLQS 542

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
            +P+ F F   + V+ IV++ G++SL        +L 
Sbjct: 543 ATPETFTFVTGLTVLLIVVVAGVSSLGSGLAVALLLG 579


>gi|269797175|ref|YP_003311075.1| inner-membrane translocator [Veillonella parvula DSM 2008]
 gi|282849417|ref|ZP_06258802.1| amino acid or sugar ABC transport system, permease protein
           [Veillonella parvula ATCC 17745]
 gi|294793245|ref|ZP_06758391.1| ribose ABC transporter, permease protein [Veillonella sp. 6_1_27]
 gi|269093804|gb|ACZ23795.1| inner-membrane translocator [Veillonella parvula DSM 2008]
 gi|282581121|gb|EFB86519.1| amino acid or sugar ABC transport system, permease protein
           [Veillonella parvula ATCC 17745]
 gi|294456190|gb|EFG24554.1| ribose ABC transporter, permease protein [Veillonella sp. 6_1_27]
          Length = 311

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 92/304 (30%), Gaps = 25/304 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            +++ +   +      + ++  Q+ I  + A+G++ V+   G + L+     A+ +    
Sbjct: 22  FVIISVMNDSFLEFSNLRNLLRQVSINAIIAFGMTFVI-LTGGIDLSVGSILALSSAVMA 80

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
                 G    L I ++A      G I GL     R                   +    
Sbjct: 81  -NLIVTGTDPVLAIVLAAGAGLVLGGINGLVITYGRVAPFIAT------------LATMT 127

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           I  G   ++         T       F +   + +       ++          +   L 
Sbjct: 128 IYRGATLVFTDGNPISGLTQDPLFHGFGQGDIAGLPVPAITMFLAF------IILWFVLS 181

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           RT++      +  ++K  +     I   K+  +A++    G+AGA   +  +   P    
Sbjct: 182 RTSLGRKTYAVGGSEKVSYIAGIKIDRVKIFVYALTGMLCGIAGAIITSRLNSAQPTAGA 241

Query: 263 FSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             E   + ++V     + GG   +        I+  +      ++   F   +       
Sbjct: 242 GYELDAIAAVVLGGTSLAGGRGHIVGTLIGALIIGTLNNGLNILDVSSFYQQVVKGIVIL 301

Query: 318 MRHT 321
           +   
Sbjct: 302 LAVL 305


>gi|71278067|ref|YP_270090.1| putative branched-chain amino acid ABC transporter permease
           [Colwellia psychrerythraea 34H]
 gi|71143807|gb|AAZ24280.1| putative branched-chain amino acid ABC transporter, permease
           protein [Colwellia psychrerythraea 34H]
          Length = 297

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 91/306 (29%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I  L+Y +      +V  S  +++        IGA+          L  +L   +
Sbjct: 10  VINGLIVGLLYGVIGMCFVLVYKSTQIVNFAQGEFLLIGAWVCWASLIYLELPFFLGFIL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +     G+++ +  L+       I+ ++++               G +          
Sbjct: 70  SLVFMAGFGVLLQMVVLRPMIGEPIISVIMVTIGLSIFFQSLMKWIFGVSPQSYPQVFDT 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +  E+      +    +  +  L+ + +    A R    +Q+
Sbjct: 130 -----------QSINILGLNVEMAYLMSTVIALIIMVAFYLFFKHSKHGLAMRATAFDQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL  ++      ++ +++     AG                    I V   VILGG+
Sbjct: 179 ASQSLGVSVKHVFAMSWGIAATVSATAGIVLGMVNGVSDSLS---IMGIKVFPAVILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +  +    +  Y +            +       L +++  + + 
Sbjct: 236 DSIIGAIVGGLIIGVLENVAEFFDSQYLH--------IGNMYDIAPFYVLLIILWFKPYG 287

Query: 339 LLRLRT 344
           L   + 
Sbjct: 288 LFGTKD 293


>gi|293606806|ref|ZP_06689157.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292814810|gb|EFF73940.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 286

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 90/302 (29%), Gaps = 26/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   +Y + + GL++V G + +++        +G +         GL   +   +
Sbjct: 7   LVDGILLGGVYAVISIGLTLVFGVVSIVNFAQAEFLMVGMFVAYFAWKLLGLDPLIGSLL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S  ++   G++     +       A+A + ++     ++     I  G            
Sbjct: 67  SFAVAFVLGVLTQKFLINRVLKAPAVAQIFLTVGLLIVMENLALILFGSEFRS------- 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V++  +        +++                ++   L++T    A R    +  
Sbjct: 120 ----VQTSYQMTALALGPILFSAPYLLAFTVASVAGLTLWWVLKKTWWGMAVRATAQDPM 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A      +       AF +      + G                   ++++ + V+LGG+
Sbjct: 176 AARLSGISTHRVHQLAFGLGVGLTALGGGIILPYLTA--STTVGAQFSVLMFTAVVLGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +  +  L   +      +              ++     LV+ +R   
Sbjct: 234 GSVMGAVVGGIAVGVIQSLSSLVLPMQLQN-------------LVLFAIFILVLAVRPEG 280

Query: 339 LL 340
           LL
Sbjct: 281 LL 282


>gi|326316372|ref|YP_004234044.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323373208|gb|ADX45477.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 291

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 85/290 (29%), Gaps = 14/290 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             + +  I+ L+  + A  +++V+G     +         GAY+ V + S  G+ +WL  
Sbjct: 8   NLLINGLIEGLVVALPALAMTLVMGVNRFPNAATGDLMTTGAYAAVAVQSLGGVPLWLAA 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             S  ++            +       +A+++ +     +L        G         L
Sbjct: 68  IASVGVTAVVSAGSYQLIFRKLAGRPMVASMLAAIGLGFLLRSLISFFAGHDQRTFELPL 127

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                          +    +        +        A + + + RT+     R + D+
Sbjct: 128 ------------VRAWNFGGIRILPTDLLIAAIAAACLAVVFVLIYRTSFGRQLRAVADS 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                +         L  + +  A   + G         I      +   I   + ++LG
Sbjct: 176 ADLARASGIRAGGLMLCLWLLVGALSSIGGVLLGMKA--IVTPEMGWESLIPAFAAMVLG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           G+ S         +L  V EL   +    +  +L F     +       I
Sbjct: 234 GIGSPVGAVLGALVLCIVQELSVPLLGPSYKLVLSFVVLALVLLLRPAGI 283


>gi|260222935|emb|CBA32999.1| hypothetical protein Csp_B16840 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 326

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/301 (10%), Positives = 76/301 (25%), Gaps = 26/301 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                IY + A G +++  + G ++        + A+  +   S              + 
Sbjct: 47  MATGAIYSLAALGFTLLWQASGTINFAQGEFVMLPAFMMLGFMSIGAPLAVSFAMTVVLA 106

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G +     +     +  +  ++ +      +                         
Sbjct: 107 VFLLGWVFKRGLVDPLFKFGMMPIVVATIGLSIAMRNGLRAGYSAEAHP----------- 155

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             SL     F  + V   +           L   +  ++ +T    A + +  N ++   
Sbjct: 156 FPSLFADKLFNIAGVTITLADVGTFAVALILVFVVQAFMTKTVTGRAMQAVAQNTESASV 215

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   +      AFA+++     A          ++      S         I+GG  +  
Sbjct: 216 LGINVPRMIFYAFAINAVLAVAAALLVTP--TYLAKFDMGESLGNKAFFAAIIGGFNNSR 273

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  I+     L        +   +               +   +VIL +   LL  
Sbjct: 274 GALLGGLIVGVCENLAAAYISPAYKDAVAL-------------VIFMVVILFKPQGLLGK 320

Query: 343 R 343
           +
Sbjct: 321 K 321


>gi|220914903|ref|YP_002490211.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219952654|gb|ACL63044.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 293

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 103/304 (33%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+I+ G L +++      Y +GA+   +L +  G+  W  + +
Sbjct: 14  LLLGLINGSFYAILSLGLAIIFGLLNIINFTHGAQYMMGAFVAWMLLNYAGIGYWWALLL 73

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +  G  G+I+    +        +  L+++     I+        G +G+  A     
Sbjct: 74  APLAVGLFGVILERLLIARLYKLDHLYGLLLTFGLALIIQGLFRNQYGVSGLPYAIPAEL 133

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G               F+    +  +V++    +  +  L + +T +    R   +N  
Sbjct: 134 SG----------GQRLPFMFLPNYRGWVVVASLVVCLATWLVIEKTKLGAYLRAATENPT 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +    A    AG   A                I+V ++V++GGM
Sbjct: 184 LVQAFGVNVPLLLTLTYGFGVALAAFAGVLAAPVYSV--NPNMGADIIIVVFAVVVIGGM 241

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L  V  L                  +    +T++ + + LV+L++   
Sbjct: 242 GSILGSIVTGFTLGLVEGLTKVF--------------YPEASSTVIFVIMVLVLLVKPAG 287

Query: 339 LLRL 342
           L   
Sbjct: 288 LFGR 291


>gi|170746745|ref|YP_001753005.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
 gi|170653267|gb|ACB22322.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
          Length = 290

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 85/282 (30%), Gaps = 18/282 (6%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--YVILGSRYGLSIWLLIPVSAMISG 104
           +IY   A+G  +   +   L+     A A+GA     ++    Y L I L++     +  
Sbjct: 16  MIYAAIAFGYQLTFATSKTLNFGQGEALALGALFGLTLVPFVGYWLMIPLVLVFGFALGA 75

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
               +   P++K + +Y  I   I   I    + +                         
Sbjct: 76  VVERLGVRPAVKIKSEYGWIMATIALGIIFKNVAENVW--------------GRDDLKFP 121

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           S +         V        ++ G   +  ++ ++ R++    A     ++  A   + 
Sbjct: 122 SPLPETALQVGGVRILPMELLIVAGALLMMLAVEIFNRKSIWGKAVVATSNDIDAAGLMG 181

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                    ++++S+     AG   A     ++         +   ++ I+GG+ S   +
Sbjct: 182 INTQKVITLSYSISAMTAAFAGVLVAPV--TLTGATMGSVLALKAFAVAIIGGLESGLGV 239

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
                IL     L        +  +        +     + +
Sbjct: 240 IVGGLILGVAETLTGFYISTGYKDVPGLILLLVVLSIRPVGL 281


>gi|307543782|ref|YP_003896261.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307215806|emb|CBV41076.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 380

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/297 (9%), Positives = 82/297 (27%), Gaps = 10/297 (3%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               S     +M   + I+ + + G+ ++V   G + L+              L      
Sbjct: 42  PVYFSVDNFLTMSSHVAIFGLLSIGM-LLVILTGGIDLSVGSTLGFAGVFAGFLMQGVSF 100

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            ++ ++    + +           +      +    +   ++   +             +
Sbjct: 101 EVFGVVVYPPVWAVVVLTCAMGALVG----AINGVLIAYFKVPAFVATLGMLYVARGVAL 156

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            + D L +        +    F          +   +L +  ++   +L L RT      
Sbjct: 157 LMTDGLTYNNLGGSPELGNTGFDWLGFNRLFGVPVGVLVLAAVAIVALLALIRTPFGRWV 216

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
            +   N +A       +   ++S + +S     +AG   ++      P      E   + 
Sbjct: 217 YSTGGNARAAELSGVPVKRVQVSVYVLSGICAAIAGLVLSSQLTSAGPTAGTTYELTAIA 276

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            +VI      GG  ++        ++  + +    +    +   +       +    
Sbjct: 277 GVVIGGAALTGGRGNVRGTLLGAFVIGFLSDGLVIIGVSSYWQTVFTGAVIVLAVLL 333


>gi|251797969|ref|YP_003012700.1| inner-membrane translocator [Paenibacillus sp. JDR-2]
 gi|247545595|gb|ACT02614.1| inner-membrane translocator [Paenibacillus sp. JDR-2]
          Length = 320

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 101/324 (31%), Gaps = 25/324 (7%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F L          L  ++   ++ +   +      I ++  Q+ I  + A+G++ V+   
Sbjct: 11  FPLSQITQKLGPLLGLILLIAIVSIMNPSFLEPLNILNLLRQVSINALIAFGMTFVI-LT 69

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+     A+ +     +       I  ++    +      +   + +         
Sbjct: 70  GGIDLSVGSILALSSAFVANMMLAGFDPIIAILLGCMVGGVMGMVNGLMITKG--KMAPF 127

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           IATL    IF+ + +                 +Y  G  +  L     F      Y   +
Sbjct: 128 IATLATMTIFRGLTL-----------------VYTNGNPITGLGDSMAFQLFGRGYMFGI 170

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
               + M    A++ + L +TA       I  N+KA       +   K+  ++++     
Sbjct: 171 PVPAITMILTFAALWIILHKTAFGRKTYAIGGNEKASIVSGIKVTRVKIMIYSLAGMLSA 230

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELC 298
           +AGA   +  +   P      E   + ++V     + GG   +        I+  +    
Sbjct: 231 LAGAILTSRLNSAQPTAGTSYELDAIAAVVLGGTSLSGGRGRIVGTLIGALIIGTLNNGL 290

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTT 322
             +    F  ++       +    
Sbjct: 291 NLLGVSSFYQMVVKGIVILIAVLI 314


>gi|146276971|ref|YP_001167130.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025]
 gi|145555212|gb|ABP69825.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025]
          Length = 336

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/318 (10%), Positives = 83/318 (26%), Gaps = 19/318 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL------- 95
                   + A G++++ G L   +       A G    ++       +           
Sbjct: 19  LAYGAQLALGALGVTLIYGILRFSNFAHGDTMAFGTMVTILGTWGLQSAGVSAGPLPTAL 78

Query: 96  --IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
             +P+   ++ A  +       +F     A  T+++      + +    +        + 
Sbjct: 79  LALPLGIAVTAALVLGTDRAVYRFYRRQKAAPTILVIVSLGVMFVMNGIVRFIIGVEEIG 138

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                         R     S  +         ++    + A++  +L RT    + R  
Sbjct: 139 FTDGERFLITAGDFRNMTGLSEGLAIRTTQAITVVTAVIVVAALFWFLNRTRTGKSMRAF 198

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            DN+                 + +++A    AG  +   +         F   + + +  
Sbjct: 199 SDNEDLALLSGINPERVVAVTWILAAALATTAGVLYGLDKSF--KAFTYFQLLLPIFASA 256

Query: 274 ILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           I+GG+ S         ++             +   +                     +  
Sbjct: 257 IVGGLGSPIGAIAGGFVIAFSEVTVTYAWKKVATYLLPDALAPDGLVQLMSTDYKFAVSF 316

Query: 326 IALFLVILMRSHSLLRLR 343
             L +V+L     L + +
Sbjct: 317 AILIIVLLFMPTGLFKGK 334


>gi|108806408|ref|YP_650324.1| sugar transport system permease [Yersinia pestis Antiqua]
 gi|108813221|ref|YP_648988.1| sugar transport system permease [Yersinia pestis Nepal516]
 gi|145597959|ref|YP_001162035.1| sugar transport system permease [Yersinia pestis Pestoides F]
 gi|162419041|ref|YP_001608182.1| sugar transport system permease [Yersinia pestis Angola]
 gi|165925106|ref|ZP_02220938.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165937270|ref|ZP_02225834.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010236|ref|ZP_02231134.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212801|ref|ZP_02238836.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167399880|ref|ZP_02305398.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167425303|ref|ZP_02317056.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467353|ref|ZP_02332057.1| ribose ABC transporter, permease protein [Yersinia pestis FV-1]
 gi|229840765|ref|ZP_04460924.1| sugar transport system permease [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229842676|ref|ZP_04462831.1| sugar transport system permease [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229903671|ref|ZP_04518784.1| sugar transport system permease [Yersinia pestis Nepal516]
 gi|294502964|ref|YP_003567026.1| sugar transport system permease [Yersinia pestis Z176003]
 gi|108776869|gb|ABG19388.1| sugar transport system permease [Yersinia pestis Nepal516]
 gi|108778321|gb|ABG12379.1| sugar transport system permease [Yersinia pestis Antiqua]
 gi|145209655|gb|ABP39062.1| sugar transport system permease [Yersinia pestis Pestoides F]
 gi|162351856|gb|ABX85804.1| ribose ABC transporter, permease protein [Yersinia pestis Angola]
 gi|165914744|gb|EDR33357.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165923306|gb|EDR40457.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990722|gb|EDR43023.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166206093|gb|EDR50573.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167050588|gb|EDR61996.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055703|gb|EDR65487.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229679441|gb|EEO75544.1| sugar transport system permease [Yersinia pestis Nepal516]
 gi|229690986|gb|EEO83040.1| sugar transport system permease [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229697131|gb|EEO87178.1| sugar transport system permease [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|262360999|gb|ACY57720.1| sugar transport system permease [Yersinia pestis D106004]
 gi|262364938|gb|ACY61495.1| sugar transport system permease [Yersinia pestis D182038]
 gi|294353423|gb|ADE63764.1| sugar transport system permease [Yersinia pestis Z176003]
 gi|320014067|gb|ADV97638.1| sugar transport system permease [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 334

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/323 (13%), Positives = 91/323 (28%), Gaps = 24/323 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLG 64
               + L AV+     F     T S+ Y  S      +  Q+ I  + A G++ V+ + G
Sbjct: 19  ILAFVGLCAVIALAGEFAVNSGTWSENYFLSRDNTLIILRQVSINGILAIGMTFVIITAG 78

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+      +         +              ++     + +GL      G  L  
Sbjct: 79  -VDLSVGAVLGLAGIVAARFATNNSAIALGGTDWPLLVPIVIAIGIGLVCGAINGFILGK 137

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
             L    +   +L   + +T    G     +L      +               Y + + 
Sbjct: 138 YRLQPFIVTMGMLSVARGLTLLTTGGNPVSQLTDEFRWL------------GNGYILGIP 185

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +L    L A     L +         +  N+K+  +    ++  K++ + +      +
Sbjct: 186 VPVLIFIILFAIAWFVLNKMTFGRYVYAVGGNEKSARTSGINVLRIKVAVYTLCGILAAI 245

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
           AG    A             E   + ++VI      GG+ +L        I+  +     
Sbjct: 246 AGLILTARTGSAQTGAGVSYELDAIAAVVIGGTSMAGGIGTLRGTLFGVLIIGVMNNGLD 305

Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322
            +    +   +            
Sbjct: 306 LLGVQSYYQQIIKGVLIVFAVML 328


>gi|238019796|ref|ZP_04600222.1| hypothetical protein VEIDISOL_01671 [Veillonella dispar ATCC 17748]
 gi|237863320|gb|EEP64610.1| hypothetical protein VEIDISOL_01671 [Veillonella dispar ATCC 17748]
          Length = 311

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 92/304 (30%), Gaps = 25/304 (8%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            +++ +   +      + ++  Q+ I  + A+G++ V+   G + L+     A+ +    
Sbjct: 22  FVIISVMNDSFLEFSNLRNLLRQVSINAIIAFGMTFVI-LTGGIDLSVGSILALSSAVMA 80

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
                 G    L I ++A      G I GL     R                   +    
Sbjct: 81  -NLIVTGTDPVLAIVLAAGAGLVLGGINGLVITYGRVAPFIAT------------LATMT 127

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           I  G   ++         T       F +   + +       ++          +   L 
Sbjct: 128 IYRGATLVFTDGNPISGLTQDPLFHGFGQGDIAGLPVPAITMFLAF------IILWFVLS 181

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           RT++      +  ++K  +     I   K+  +A++    G+AGA   +  +   P    
Sbjct: 182 RTSLGRKTYAVGGSEKVSYIAGIKIDRVKIFVYALTGMLCGIAGAIITSRLNSAQPTAGA 241

Query: 263 FSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             E   + ++V     + GG   +        I+  +      ++   F   +       
Sbjct: 242 GYELDAIAAVVLGGTSLAGGRGHIIGTLIGALIIGTLNNGLNILDVSSFYQQVVKGIVIL 301

Query: 318 MRHT 321
           +   
Sbjct: 302 LAVL 305


>gi|91976058|ref|YP_568717.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91682514|gb|ABE38816.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 315

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 109/318 (34%), Gaps = 26/318 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +  ++  + A GL+++   LG+L+      Y +GA+    +   +    W  +  +
Sbjct: 10  LNGVLFGMLLFLMASGLTVIFSMLGVLNFAHASFYMLGAFFGFQISRWF--GFWPALLFA 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++GA G  +    L+       +A L+ +      + +   I  GK+ +         
Sbjct: 68  PLLAGAIGAAVERFGLRRVHRNGHVAELLFTFGLAFAIEEIVQIIWGKSPVDFRPPAL-- 125

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                  + F  F      Y  +  ++L     +   ++L L++T +    +    +   
Sbjct: 126 -------LDFPAFTIFSTNYPAYKMFMLAVSIVIFIGLLLVLKKTRVGLIVQAALTHPHM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L   +    +  F V +A   +AG     S   ++          I+  +V++GG+ 
Sbjct: 179 VGHLGHNVERIFMLVFGVGTALAAVAGVIAGPSL--VTQSNMAGLLGPILFVVVVVGGLG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT-------------TLMVI 326
           SL     A+ ++  V      +N    +                            +  +
Sbjct: 237 SLPGAFIASLLIGLVQTFAVSINGSLASVFGPLGPDLAQSWLSDIWNVTVAQIAPIMPYL 296

Query: 327 ALFLVILMRSHSLLRLRT 344
            L L+++ R   LL  R 
Sbjct: 297 LLVLILIFRPMGLLGTRE 314


>gi|284165019|ref|YP_003403298.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511]
 gi|284014674|gb|ADB60625.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511]
          Length = 370

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/353 (12%), Positives = 99/353 (28%), Gaps = 36/353 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + LL  +   L       ++  +Y+    +  LI  +   GLS+    L   +       
Sbjct: 29  VALLGDLILGLASGTYSISRVARYVTEGILYGLIIGLAGIGLSMTYSILNFANFAHGDYV 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL---------AIA 125
             GA+    +           +    +++    +      +      +          +A
Sbjct: 89  TTGAFFGWGVTYLVAGWGVASVGPLVLVAPQREVSGAQLDVAITATPIAVLAGLLVAGVA 148

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           T +   +      K    + G   +  +  + F    V   +       +        + 
Sbjct: 149 TALFVLLIDRFAFKPVRGSGGIPLLITSVGVAFALRYVLVFVYSSSTRGTTASVPSVDFL 208

Query: 186 V--------------LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           +              ++    L   +   L+RT +  A R + DN+              
Sbjct: 209 LVDGYVSIGAHDATLIVAAVTLMLGVHFLLQRTKLGKAMRAMSDNRDLALVTGIPTERVI 268

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              + +     G AG         I    F +   +++ + VILGG+ S+        ++
Sbjct: 269 RWTWMIGGGLAGTAGYLMVLWTGTIDW-QFGWLLLLLIFAAVILGGIGSIYGAIFGGLVI 327

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
              + +                       T    + + LV+L+R   L   +T
Sbjct: 328 GVGMHM------------SMIWLPGGDFTTITAFLLMILVLLIRPSGLFGGKT 368


>gi|116493877|ref|YP_805611.1| ribose/xylose/arabinose/galactoside ABC-type transporter permease
           [Lactobacillus casei ATCC 334]
 gi|191637142|ref|YP_001986308.1| Ribose ABC transporter [Lactobacillus casei BL23]
 gi|227533139|ref|ZP_03963188.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|301065477|ref|YP_003787500.1| ribose/xylose/arabinose/galactoside ABC transporter permease
           [Lactobacillus casei str. Zhang]
 gi|116104027|gb|ABJ69169.1| ribose ABC transporter membrane protein [Lactobacillus casei ATCC
           334]
 gi|190711444|emb|CAQ65450.1| Ribose ABC transporter [Lactobacillus casei BL23]
 gi|227189241|gb|EEI69308.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|300437884|gb|ADK17650.1| Ribose/xylose/arabinose/galactoside ABC-type transport system,
           permease component [Lactobacillus casei str. Zhang]
 gi|327381177|gb|AEA52653.1| Sugar ABC transporter, permease protein [Lactobacillus casei LC2W]
 gi|327384350|gb|AEA55824.1| Sugar ABC transporter, permease protein [Lactobacillus casei BD-II]
          Length = 326

 Score = 61.8 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 81/300 (27%), Gaps = 23/300 (7%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      S   + ++  Q+ I  + A+G++ V+   G + L+     A+       + + 
Sbjct: 37  IMSPTFVSPANLLNLLRQVSINAVIAFGMTFVI-LTGGIDLSVGSILALSGAVTASMLAS 95

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
              +   L+    + +    +   L +      Y   A  I +     I      +    
Sbjct: 96  GFAAPLALLAGLVLGAIFGLLNGILIA------YGKAAPFIATLATMTIFRGATYVFTNG 149

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
             I  A                F  P             ++ M      + + L +T+  
Sbjct: 150 NPITGAKMNSSFLFQFMGRGYLFGIPFP-----------IIIMLVAYGVLFVLLHKTSFG 198

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N+ A            +  + +S     +AG    +      PD     E  
Sbjct: 199 RKTYALGGNETAARIAGVRTKMVTMLIYTISGLMAAIAGIILTSRLSSAQPDAGTSYEMD 258

Query: 268 IVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V     + GG   +        I+  +      +    F   +       +    
Sbjct: 259 AIAAVVLGGTSLAGGKGRIFGTLIGALIIGTLNNGMNLLGISSFYQQIVKGIVILIAVLL 318


>gi|237805423|ref|ZP_04592127.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331026530|gb|EGI06585.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 148

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 51/127 (40%), Positives = 71/127 (55%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L++  F+      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAYS
Sbjct: 22  LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 81

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
           Y +L   YGL  W+ +P++ +++   G ++G P L+ RGDYLAI TL   EI +  L   
Sbjct: 82  YALLSHYYGLGFWICLPIAGLMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRIFLRNL 141

Query: 141 KPITNGK 147
             IT G 
Sbjct: 142 TDITGGP 148


>gi|218516309|ref|ZP_03513149.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli 8C-3]
          Length = 284

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 53/182 (29%), Gaps = 14/182 (7%)

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
               S                    +L+    +   + L +  T +  + R +  N +  
Sbjct: 113 YKFFSGGYIEPVSILGFSLAEQRVIILIVCLIVFIGLELMVTYTRMGKSMRAVSQNVECC 172

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             +   +    L  F + +A   ++G   A     +   M         + I+I+GG+ +
Sbjct: 173 EVVGIDVPQVVLRTFILGAALAALSGVLTAPVNVSVYGGM-GELITFKTLPIIIMGGLGN 231

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +     A  IL     L        F   + F               L L+++ R H L 
Sbjct: 232 VRGTFFAAMILGIAESLVATYVGLQFRDTVGFAT-------------LILMLMWRPHGLF 278

Query: 341 RL 342
             
Sbjct: 279 ST 280


>gi|167582181|ref|ZP_02375055.1| branched-chain amino acid ABC transporter, permease/ATP binding
           protein, putative [Burkholderia thailandensis TXDOH]
          Length = 310

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 104/303 (34%), Gaps = 12/303 (3%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            L+ +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 14  ALSWLALVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 73

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+     +   A G + G  + +  G   A+ TL + E+    
Sbjct: 74  GAFVAAHGFNRYGLPLPLVPLAGGVAGAAFGALFGFVATRRAGTAFAMITLGLGELVAAA 133

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                     +      +  Y ++   C  +A 
Sbjct: 134 AWSVPDWFGGAGGVSI------------DRAAGPALAAWDFGKPMHAYALIAVWCVAAAV 181

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT  +     +RDN     +L T     + +    ++ F G++GA      +  
Sbjct: 182 AMRVLVRTPFARLANAVRDNPARVAALGTDPRRVRYAMAIAAAFFAGVSGALTLIDVEVA 241

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +   L     + 
Sbjct: 242 TSESVGMLRSGAVLFATVIGGATAFFGPVVGAVLLTFFSVFVASVSRAWLLYLGLLFVAV 301

Query: 317 NMR 319
            + 
Sbjct: 302 VLA 304


>gi|165977105|ref|YP_001652698.1| ribose ABC transporter permease protein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|165877206|gb|ABY70254.1| ribose transport system permease protein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
          Length = 319

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 79/312 (25%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +    ++        S   + ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 17  IIALLALIAVVSFLNPNFFSVDNLLNILRQTSVNAIIAIGMTFVILIAG-IDLSVGSVLA 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L         ++  V    +    +   L +                + F  
Sbjct: 76  LTGAVAATLIGLDLSIYLVVPAVLLFGAAIGLLNGALVA------------FGKVQAFMA 123

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            LI    +            +    +              F +        +L       
Sbjct: 124 TLITMLLLRGVTMIYMEGRPISTGFSDNADYFAEIGTGELFGVPVPVWLMFILFAIGWFT 183

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +T I      +  N+ A       +   KL  FAVS     +AG    +    
Sbjct: 184 L-----TQTRIGRYIYALGGNESATALSGINVNKIKLFVFAVSGVLAALAGLIVTSRLGS 238

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+     +GG   +        I+  +      ++   +  L+
Sbjct: 239 AQPTAGTGYELDAIAAVVVGGTSLMGGKGRIIGTLIGALIIGFLSNALNLLDIDSYYQLV 298

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 299 AKALVILAAVIL 310


>gi|163736525|ref|ZP_02143944.1| hypothetical protein RGBS107_15376 [Phaeobacter gallaeciensis
           BS107]
 gi|161390395|gb|EDQ14745.1| hypothetical protein RGBS107_15376 [Phaeobacter gallaeciensis
           BS107]
          Length = 306

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 106/306 (34%), Gaps = 15/306 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++  + A GL++V G +GL++L     Y                +  +    
Sbjct: 10  ILNGLQFGVMLFLMAAGLTLVFGVMGLINLAHGALYM----------VGAFAAAVVAAWT 59

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            + +      +    +     ++L I  L   +    +L  +  I     G       + 
Sbjct: 60  GSFVLALMASLAAAAAAGALVEFLVIRKLYDRDHLDQVLATFALILIFSEGTRWVFGSFP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   V S +         + Y ++   ++     ++A +   + RT I    R    +++
Sbjct: 120 LFLDVPSYLSGPISLPGGIEYPLYRLTIIAIGLVVAAGLFWLIARTRIGIQIRAGESDRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+
Sbjct: 180 MIAALGVDISKLYTLVFALGAALAGLAGALVGAIQSV--QVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM---RHTTLMVIALFLVILMR 335
            S+        ++     L        F   ++   + ++     + L+ I + +++L+R
Sbjct: 238 GSIKGAMVGALLVGLTDTLGGVFLPQMFALFMEPASATSVGASLASMLIYILMAVILLVR 297

Query: 336 SHSLLR 341
              L  
Sbjct: 298 PSGLYG 303


>gi|163743232|ref|ZP_02150613.1| ABC transporter permease protein [Phaeobacter gallaeciensis 2.10]
 gi|161383420|gb|EDQ07808.1| ABC transporter permease protein [Phaeobacter gallaeciensis 2.10]
          Length = 306

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 106/306 (34%), Gaps = 15/306 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++  + A GL++V G +GL++L     Y                +  +    
Sbjct: 10  ILNGLQFGVMLFLMAAGLTLVFGVMGLINLAHGALYM----------VGAFAAAVVAAWT 59

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            + +      +    +     ++L I  L   +    +L  +  I     G       + 
Sbjct: 60  GSFVLALIASLAAAAAAGALVEFLVIRKLYDRDHLDQVLATFALILIFSEGTRWVFGSFP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   V S +         + Y ++   ++     ++A +   + RT I    R    +++
Sbjct: 120 LFLDVPSYLSGPISLPGGIEYPLYRLTIIAIGLVVAAGLFWLIARTRIGIQIRAGESDRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+
Sbjct: 180 MIAALGVDISKLYTLVFALGAALAGLAGALVGAIQSV--QVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM---RHTTLMVIALFLVILMR 335
            S+        ++     L        F   ++   + ++     + L+ I + +++L+R
Sbjct: 238 GSIKGAMVGALLVGLTDTLGGVFLPQMFALFMEPASATSVGASLASMLIYILMAVILLVR 297

Query: 336 SHSLLR 341
              L  
Sbjct: 298 PSGLYG 303


>gi|330825804|ref|YP_004389107.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|329311176|gb|AEB85591.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 317

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/320 (15%), Positives = 115/320 (35%), Gaps = 27/320 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M + GL+++   +G+L+      Y +GAY          +  W  +  
Sbjct: 10  LLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHTSFYMLGAYFAY--TLSGVIGFWPALVA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ GA G +    +L+    +  +  L+++     ++++   +  G            
Sbjct: 68  APLLIGALGALFERYALRRVHKFGHVPELLVTFGLSYLVLEVVQLVWG---------RST 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + + ++   F      +     +++L    +  S+ L L RT I    +    +  
Sbjct: 119 VPYGLPAQLQGPLFTLYGTQFPKSRSFIMLVAVLMLLSVWLLLTRTRIGLVIQAALKHPH 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    +  F    A  G+AG         ++      S   I+  +V++GGM
Sbjct: 179 MVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NTYVTEPAMAASVGSIIFVVVVVGGM 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT--------------TLM 324
            SL+    A+ ++  V      +++   ++  +       +                 L 
Sbjct: 237 GSLAGAFLASLLIGLVQTFAVALDYSLVHAFTRLGVQVTEQTFGYPVLRLTISQVAPILP 296

Query: 325 VIALFLVILMRSHSLLRLRT 344
            + L L+++ R   LL  R 
Sbjct: 297 YLFLVLILIFRPKGLLGTRE 316


>gi|320335128|ref|YP_004171839.1| ABC transporter integral membrane subunit [Deinococcus maricopensis
           DSM 21211]
 gi|319756417|gb|ADV68174.1| ABC-type transporter, integral membrane subunit [Deinococcus
           maricopensis DSM 21211]
          Length = 287

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/284 (15%), Positives = 101/284 (35%), Gaps = 13/284 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +Q  IY + A GL++ VG +G+++        +GA+    L S  GL   + +P+
Sbjct: 8   LLNGLLQSGIYALVASGLALAVGVVGIVNFAHGEFLMLGAFLAWGLSSALGLDPLISLPI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+ + A G +    S++       +  ++++     +L     +  G            
Sbjct: 68  AALATFAAGALTYRVSIRHVLLAPELNQMLLTFGLGIVLQNLALMLLGGN---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              TV +  +      + +               + A +   L RT++    R +  N++
Sbjct: 118 -TRTVSTAYQGSSLHLASLTIGTPKLIAFALAAAILAGLYAVLYRTSLGQQMRAVAQNRR 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L AF+V+ A  G+AG   A               ++   +I+++ G+
Sbjct: 177 GAALIGLNVDRVYLIAFSVACALGGIAGVLVAVLLFA--SPTVGLVFSLKAFAIIVMAGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            +L+ +  A+ +L     L                         
Sbjct: 235 GNLTGVLWASVLLGVSEALVQTYVPGGGGWSDAVFFLLIFATLV 278


>gi|222475838|ref|YP_002564359.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239]
 gi|222454209|gb|ACM58473.1| inner-membrane translocator [Halorubrum lacusprofundi ATCC 49239]
          Length = 290

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/303 (8%), Positives = 84/303 (27%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +      + A GL+++ G   +L+      + +G +         G  +  ++  
Sbjct: 11  VVNGLLFGGQLALMAVGLTLIWGVARVLNFGHGAMFMVGGFVGYFTLGATGNIVVAVVSA 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++     +         R         ++  +     ++   I    +      R   
Sbjct: 71  ALVVFALGYLTEVALIRPLRDREEFGIPSMVVTLGLAFFLENAFIVWIGSQRESFPRFTS 130

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +            +    +        + +        +   + RT +    R +  +  
Sbjct: 131 VV-----------WDIGGITLSAQRVLIFVISLVALGLLFYVIARTKLGLGIRAVSQDND 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           F +S+A  G+AG   A            +   ++   +V++GG+
Sbjct: 180 TALLMGVRPNRIYAITFGISAALAGLAGVLLAPL--FAVYPSVGWYPFLLSFVVVMVGGL 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     +   L  +  +                   +     ++   + LV+ +    
Sbjct: 238 GSVRGTLLSAMGLAIIRSV-------------STIWVSSEMAMVILFGIMILVLALYPDG 284

Query: 339 LLR 341
           +  
Sbjct: 285 IGG 287


>gi|167842062|ref|ZP_02468746.1| Monosaccharide-transporting ATPase [Burkholderia thailandensis
           MSMB43]
          Length = 366

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/313 (10%), Positives = 88/313 (28%), Gaps = 10/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +    +         +     +M   + IY + A G+ +VV   G + L+     
Sbjct: 31  AFFALIAIIAIFSYLSPNYFTVDNFLTMASHVAIYGILAIGMLLVV-IDGGIDLSVGSTL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
                    L     L ++ ++   A+             +      +    +   ++  
Sbjct: 90  GFSGVVAGFLMQGVTLKMFGVVLYPAVWVVVVLCCSLGAIIGL----INGVLIARFKVPA 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +             + + + L +     ++ +    F          +   +L +  + 
Sbjct: 146 FVATLGVMYVVRGFALLMTNGLTYNNLGGQADLGNTGFNWLGFDRLFGIPIGVLVLAVIG 205

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L RTA          N +A       +   ++S + +S A   +AG   ++   
Sbjct: 206 LIGSLMLARTAFGRWLYASGGNARAAELSGVPVKKVQISVYMLSGACAAIAGLILSSQLT 265

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI     +GG  ++        ++  + +    +    +   
Sbjct: 266 SAGPTAGTTYELTAIAAVVIGGASLMGGTGNIRGTLLGAFVIGFLSDGLVILGISSYWQT 325

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 326 VFTGAVIVLAVLL 338


>gi|156936130|ref|YP_001440046.1| ribose ABC transporter permease protein [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156534384|gb|ABU79210.1| hypothetical protein ESA_04024 [Cronobacter sakazakii ATCC BAA-894]
          Length = 321

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 96/312 (30%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTVNNMLNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L      ++  +    A+ +    +   + +         IATL+M  + + 
Sbjct: 82  LTGAVAASLVGIEVNALVAVAAALALGAAIGAVTGVIVAKGRVQA--FIATLVMMLLLRG 139

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +++   +    G                    F +        +     ++ + FL  
Sbjct: 140 VTLQYTNGSPVSTG-------------FNDNADLFGWFGIGRPLGVPTPVWIMALVFLVT 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A      ++   K+  +++S     +AG    A    
Sbjct: 187 WYVLHHTR--LGRYIYALGGNEAATRLSGISVNKIKIIVYSLSGLLASLAGVIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPLAGAGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNSLNLLGVSPYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|121607163|ref|YP_994970.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121551803|gb|ABM55952.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 311

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 96/311 (30%), Gaps = 22/311 (7%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           L A      +       ++  + A GL++ +G +  ++L        G Y  V+L  R  
Sbjct: 16  LPAAAMLTLLFDGIAYGMLLFILALGLAVTMGLMHFVNLAHGAFAMAGGYITVLLMQRLD 75

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +   + +P++       G ++     +       +  ++ S     I +       G   
Sbjct: 76  VPFLVCLPLAFAGPALLGGVLERTLYRPLYRKPHLDQVLFSIGLVFIAVAGADYFAGSTQ 135

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             +                 +   +  +    +  +++     L+  +   L RT   + 
Sbjct: 136 QIMQLP------EWLKGRTEWGSGAFMLGMGHYRLFIIALCAALTVGLQYLLARTRWGSR 189

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R   D+Q+    L   +    LS FA+ S   G+ GA  A          F     I  
Sbjct: 190 LRAAVDDQRVAAGLGIDVNLVFLSTFAIGSGLAGLGGALGAEMLGL--DPSFPLKFMIHF 247

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           + +V +GG +S++                         + +            ++   + 
Sbjct: 248 LIVVAVGGTSSITGP--------------LLAALLLGIADVAGKYYIPKLGAFIVYSLMI 293

Query: 330 LVILMRSHSLL 340
           +++L R   L 
Sbjct: 294 VILLWRPQGLF 304


>gi|15890849|ref|NP_356521.1| ABC transporter, membrane spanning protein (branched chain amino
           acid) [Agrobacterium tumefaciens str. C58]
 gi|15159142|gb|AAK89306.1| ABC transporter, membrane spanning protein (branched chain amino
           acid) [Agrobacterium tumefaciens str. C58]
          Length = 295

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 102/315 (32%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    I    Y + + GL+++ G L +++      Y +GA+   +   
Sbjct: 4   IFGIPIQALLGQLLIGLINGSFYALLSLGLAVIFGLLRVINFAHGAQYMLGAFVAFLGLQ 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +G++ W+ + V+ ++    G I+    L    D   +  L+ +     ++        G
Sbjct: 64  YFGINFWMALIVTPLVVALFGAIVERFMLSRLYDLDPLYGLLFTFGLALVVEGTFRWLYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            AG   +                      F+    +  +V++       +    + +T +
Sbjct: 124 AAGQPYSVP----------RELAGGTNLGFMFLPNYRAFVVVISLVACIATWALIEKTRL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
            +  R   +N     +    +       +A+ +   G  G   A         +   +  
Sbjct: 174 GSYLRAATENPTLVQAFGINVPVLLTLTYALGAGLAGFTGVLAAPIYQV--SPLMGTNLI 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+        +L     L                  +      ++ +
Sbjct: 232 IVVFAVVVVGGMGSIMGAIVTGYMLGIAEGLTKVF--------------YPEASNIVIFV 277

Query: 327 ALFLVILMRSHSLLR 341
            +  V+L+R   L  
Sbjct: 278 IMAFVLLIRPAGLFG 292


>gi|119385779|ref|YP_916834.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119376374|gb|ABL71138.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 292

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 94/284 (33%), Gaps = 12/284 (4%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                +Y +   GL++V G++ +L+++     A+G Y    + + +GL     +  + ++
Sbjct: 12  LTLGAVYAISTVGLALVFGAMNMLNMSHGALMALGGYMAWFMVTGFGLPPVAGMLAAVLV 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
             A G+++          YL IA  ++        I    I  G     V    +     
Sbjct: 72  CAAVGVLI----------YLLIAKPMLQSEGFETRIFIATIGFGAMLESVILMAFGPQPK 121

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
            + L     F  + V   I    +L+    L A++ L L+++ I  A R    N+ A   
Sbjct: 122 PQPLAVQGGFSLAGVHLPIQNLLILVLSMLLMAALALLLQKSRIGRAIRATAQNRDAARL 181

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   I         +S     ++G   ++    +          +    I ++ G+  + 
Sbjct: 182 MGVRIGVVYALVLGISGGLAAISGITVSSLSSLL--PNMGGDPMLKAFIICVVAGLGRVP 239

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
               A   +     +        F+  L       +       +
Sbjct: 240 GSVIAALFIGLFEAVVQYTIGVRFSFALLLLLVIVVLIWKPQGV 283


>gi|94312448|ref|YP_585658.1| inner-membrane translocator [Cupriavidus metallidurans CH34]
 gi|93356300|gb|ABF10389.1| ABC-type transporter, permease component [Cupriavidus metallidurans
           CH34]
          Length = 294

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/316 (14%), Positives = 108/316 (34%), Gaps = 26/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y M + GL+++ G L +++      + +GA        
Sbjct: 3   IFGIPLPAMLSQLLLGLVNGAFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLAWAGME 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL+ W+++ +S ++ G  G+I+    L++      I  L+++     ++        G
Sbjct: 63  YVGLNYWVMLILSPLVVGVLGVIIEKTMLRWIYKLDHIYGLLLTLGITLVIEGVFRSIYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+  +      G T             F+I   +  +V+     +  +    + +T +
Sbjct: 123 VSGLPYSAPDALQGAT----------DLGFMILPNYRAWVVAASIVVCLATWFVIEKTKL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N K   +    +       +    A    AG   A         +   +  
Sbjct: 173 GAYLRAGTENPKIVEAFGINVPLMVTLTYGFGVALAAFAGVLAAPVIQV--SPLMGQNLI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           IIV ++V++GGM S+         L  +  L                  +    +T++  
Sbjct: 231 IIVFAVVVIGGMGSIMGSIITGLGLGVIEGLTKVF--------------YPEASSTVVFF 276

Query: 327 ALFLVILMRSHSLLRL 342
            + +V+++R   L   
Sbjct: 277 IMVIVLMLRPAGLFGR 292


>gi|298292888|ref|YP_003694827.1| inner-membrane translocator [Starkeya novella DSM 506]
 gi|296929399|gb|ADH90208.1| inner-membrane translocator [Starkeya novella DSM 506]
          Length = 301

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 85/291 (29%), Gaps = 18/291 (6%)

Query: 51  MFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIM 110
           + A GLS++ G L ++++     YAIGAY             W        +  +  ++ 
Sbjct: 22  LVAVGLSLIFGVLRIVNVAHGSFYAIGAYVAASFSLLIAAEGWSPWLTYPAMILSACLVG 81

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
            +         L        E    +L+ +      +        +          +   
Sbjct: 82  IVLGGALEVGLLRRIYG--KEQVLQLLVTFAVFMILEDMQKAVWGVSPYFIDAPLGLLGT 139

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                       +  V      +  S+   LRRT +      + D+++   ++       
Sbjct: 140 VNILGINYSIYQLVIVPFFAAVVLVSLRYVLRRTRLGRIVTAVTDDREIAAAMGVDATRI 199

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
            L  F + ++F    GA  + S   +          I+  +I    G+  +   A A  +
Sbjct: 200 YLLTFMIGASFAAFGGALASGSTSLV--PGMGAGMTILSFAIAATAGLGRIEGAAVAALM 257

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +     L   M                     +  + +FLV+L +   L  
Sbjct: 258 IGLGRSLAVYMA--------------PEFDVLVPYLIMFLVLLFKPQGLFS 294


>gi|271964528|ref|YP_003338724.1| inner-membrane translocator [Streptosporangium roseum DSM 43021]
 gi|270507703|gb|ACZ85981.1| inner-membrane translocator [Streptosporangium roseum DSM 43021]
          Length = 296

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 82/306 (26%), Gaps = 21/306 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G  I+  +  +++         G +          +  W  + +
Sbjct: 8   LANGISVGAVYALIALGFVIIFKATEVVNFAHASLLLAGGFVVAR--LHSSIGFWAALLL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               + A G+++    ++           I++     +L        G            
Sbjct: 66  GVAGAAAVGVLIEFLIIRRANVSSHSVLAIVTIGVDIVLTTELTRRIGTE---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +    R        V         L     L  + +L  + T    A R   ++ +
Sbjct: 116 -VLALGDPWRDRVVHLGPVGIAQTRVVALAVAAVLITAFLLAFKHTGWGVAMRATAEDPE 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        + A+AV+ A   +A  F          D       +      ILGG+
Sbjct: 175 TAALMGVRRGRVSMGAWAVAGALAAVAALFLCV-FPTPGLDRSTTFAAMKAFPAAILGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +       I+     L  G                         + + +V+L+R   
Sbjct: 234 DSTTGALAGGLIIGVTETLMSGYQNDLVFLGRGIGDVAP-------FLVMIVVLLIRPAG 286

Query: 339 LLRLRT 344
           L   R 
Sbjct: 287 LFGTRE 292


>gi|219871754|ref|YP_002476129.1| ribose ABC transporter permease protein [Haemophilus parasuis
           SH0165]
 gi|219691958|gb|ACL33181.1| ABC D-ribose transporter permease protein RbsC [Haemophilus
           parasuis SH0165]
          Length = 319

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 94/312 (30%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   + ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 17  IIALITLIVVVSFLNPDFFTTDNLLNILRQTSVNAIIAIGMTFVILIAG-IDLSVGSVLA 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   +         L ++++IP   +  G  G++ G      +        + M      
Sbjct: 76  LTG-AVAATLVGIDLPVYVVIPTVLVFGGLIGLLNGSLVAFGKVQAFMATLITM------ 128

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G   IY+  R    G +  +          ++   + ++ +         
Sbjct: 129 ------LLLRGVTMIYMGGRPISTGFSDNADAFAEIGTGIWLGIPVPVWLMFALFALGWF 182

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +     +T +      +  N+ A       +   KL  FAVS     +AG    +    
Sbjct: 183 VL----TQTRMGRYIYALGGNESATALSGINVNKVKLFVFAVSGVLAALAGLIVTSRLGS 238

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+     +GG   +        I+  +      ++   +  L+
Sbjct: 239 AQPTAGTGYELDAIAAVVVGGTSLMGGKGRIIGTLIGALIIGFLSNALNLLDIDSYYQLV 298

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 299 AKALVILAAVIL 310


>gi|170767056|ref|ZP_02901509.1| ribose ABC transporter, permease protein [Escherichia albertii
           TW07627]
 gi|170124494|gb|EDS93425.1| ribose ABC transporter, permease protein [Escherichia albertii
           TW07627]
          Length = 321

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 90/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                   Q 
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        +     ++G+ FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A       +   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|126666423|ref|ZP_01737402.1| inner-membrane translocator [Marinobacter sp. ELB17]
 gi|126629224|gb|EAZ99842.1| inner-membrane translocator [Marinobacter sp. ELB17]
          Length = 316

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/327 (12%), Positives = 98/327 (29%), Gaps = 26/327 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             +  +L    L          S    I +         +++   GL+S    + Y +GA
Sbjct: 6   LALLLILGVATLVGGLLLPNWMSYLFTIAMGKGLVVLGLVLLMRAGLVSFGQGLYYCLGA 65

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y   +L     ++  LLI ++++        +    L    +       +   +    L+
Sbjct: 66  YVAGMLTQFAEVTDVLLILLASVSFSVVIAAIIGLLLCRYREIFFAMFSMAFSMILYGLL 125

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +     G  VA+                 +          +  V + + F    + 
Sbjct: 126 VRNQVLGSTDGFNVANP------------SLLGWAPGPEGASNLVLAVAVLLVFTLGILA 173

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
               ++    A   +R+N+     L  ++       + +++    + G   A     + P
Sbjct: 174 WRYLKSLSGYAGEAVRENEIRLEYLGGSVFKIIYVKYIIAAGLAAIGGTVTALVSGHVDP 233

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           +M  ++ +   + I ++GG   ++    A  +   +      +  Y +            
Sbjct: 234 EMAYWTTSGEFVFIALMGGTGHVAAPIIAAVLFESLRTYASAVAPYTW------------ 281

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRTP 345
               ++  AL  +IL     L  L   
Sbjct: 282 --QMILGFALLAIILFLPSGLWSLVER 306


>gi|319763598|ref|YP_004127535.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|330824136|ref|YP_004387439.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317118159|gb|ADV00648.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|329309508|gb|AEB83923.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 297

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 95/303 (31%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    + +FA G +++ G   +L++     +  GA++ +   + +     + + V
Sbjct: 6   LLNGLVVGGTFAVFALGFTLLFGVNHILNMAYGSVFMWGAFAGLYAATVFHAPFIVALLV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +  G   +++   + +      A     +       +                     
Sbjct: 66  GMLAGGVLSVLLDFVAFRPLRRRHAPEFSYILTSIGASIALVALAQKASNTAVWQFPADT 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +             +  +     ++L    L  ++I  L  T +    R +  ++ 
Sbjct: 126 FPVVI--------HEFLGLQVQRLQLIIVLSALVLVGALIYALYYTGMGRRIRCVAHSEG 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L     +  +  F +S A  G AG     + + +   M +         I+ILGG+
Sbjct: 178 TAQLLGINAEWVNIQVFFISGALAGFAGVLIGLAFNSVHFLMGEPFLM-RAFVIIILGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++       I+  V  L            + F             + LF++IL+R   
Sbjct: 237 GSIAGSLVGGVIIGVVQTLAYAYISSAAADAIAF-------------VILFVIILIRPTG 283

Query: 339 LLR 341
           L  
Sbjct: 284 LFG 286


>gi|258626038|ref|ZP_05720894.1| Ribose transport system permease protein rbsC [Vibrio mimicus
           VM603]
 gi|262170357|ref|ZP_06038035.1| ribose ABC transport system permease protein RbsC [Vibrio mimicus
           MB-451]
 gi|258581689|gb|EEW06582.1| Ribose transport system permease protein rbsC [Vibrio mimicus
           VM603]
 gi|261891433|gb|EEY37419.1| ribose ABC transport system permease protein RbsC [Vibrio mimicus
           MB-451]
          Length = 329

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/326 (11%), Positives = 90/326 (27%), Gaps = 26/326 (7%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            ++   Y      + +     + L      S   + ++  Q     + A G++ V+ +  
Sbjct: 17  PIQWRDYIIYFVFVGIFIFFSVMLHDKGFLSSVNLMNIARQTATIAIMAVGMTFVLSAA- 75

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+     A+ A    +   +   SI + +  + ++    G I G+   +        
Sbjct: 76  EIDLSFGATVALAAIVSAL-TLQETDSILMAVSAALLVGTMIGFINGIFVTQVGIPSF-- 132

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
                             +T G  GI      +        +                  
Sbjct: 133 -----------------LVTLGTTGIITGIARWSTSLQSIPIDNDTYAFIFGSGDIGPFS 175

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            + +    ++A     LR T           N+ +       +   KL    ++     +
Sbjct: 176 VLFIWTLLVAAVGAFVLRNTTFGKHVLATGGNKVSAMYSGINVNRIKLYVLMLNGFLAAL 235

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
           AG  ++         + +    +++ +++I      GG  ++        I+  V     
Sbjct: 236 AGILYSGRLYSARYTLGESDLMLVIAAVIIGGTSLFGGKGTVIGSVIGALIMGMVNNGLI 295

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMV 325
            M       L+       +  T  M 
Sbjct: 296 LMGLNVDQQLILRGIIVIVAVTFTMG 321


>gi|397498|emb|CAA81052.1| Membrane Ribose Binding Protein [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 323

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/325 (14%), Positives = 100/325 (30%), Gaps = 26/325 (8%)

Query: 3   IFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
            F   + K    L L  +V  +++ +   +      I ++  Q+ I  + A+G++ V+  
Sbjct: 14  RFDGVMQKLGPFLGLFILV--IIVSILNPSFLEPLNILNLLRQVAINGLIAFGMTFVI-L 70

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G + L+     A+ +     +         L I +  +I    GMI GL   K +    
Sbjct: 71  TGGIDLSVGAILALSSALVAGMIVSGVD-PVLAIILGCIIGAVLGMINGLLITKGKMAPF 129

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
                 M+      L+          G     ++                    + Y + 
Sbjct: 130 IATLGTMTVFRGLTLVYTDGNPITGLGTNYGFQM-----------------FGRLGYFLG 172

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +    + M      + + L +T        I  N+KA       +   K+  ++++    
Sbjct: 173 IPVPAITMVLAFVILWVLLHKTPFGRRTYAIGGNEKAALISGIKVTRVKVMIYSLAGLLS 232

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVEL 297
            +AGA   +      P   +  E   + ++V     + GG   +        I+  +   
Sbjct: 233 ALAGAILTSRLHSAQPTAGESYELDRIAAVVLGGTSLSGGRGPIVGTLIGVLIIGTLNNG 292

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTT 322
              +    F  L+       +    
Sbjct: 293 LNLLGVSSFYQLVVKGIVILIAVLL 317


>gi|33594943|ref|NP_882586.1| putative branched-chain amino acid transport system permease
           [Bordetella parapertussis 12822]
 gi|33565019|emb|CAE39968.1| putative branched-chain amino acid transport system permease
           [Bordetella parapertussis]
          Length = 309

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 95/305 (31%), Gaps = 16/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y +   G  ++  + G+ +        + A S           +     + A +
Sbjct: 12  LMSGMLYALIGLGFVLIFKASGVFNFAQGAMVLVAALSMARFSEWIPQWLGFENMLLANV 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN----GKAGIYVADRLYF 158
                  + +  L    +   +  L+  E    ++            G+     +     
Sbjct: 72  LAFIVSALVMFVLAVAVERFVLRHLVNQEATTLLMATLGISYFLDGLGQIAFGSSVYSIN 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G      I         ++  +      +    L A++ L+ + T+   A R + D+ +
Sbjct: 132 VGMPKDPAIILETMFEGGLLINLEGLTAAVVAALLVAALALFFQYTSTGRALRAVADDHQ 191

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +    +  ++V+     +AG  + +            +  +  + +VILGG+
Sbjct: 192 AAQSIGIPLNRIWVIVWSVAGLVALVAGIIWGSKFGVQFTLS---TAALRALPVVILGGL 248

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+    ++            ++   +          +   + +L R   
Sbjct: 249 TSVPGAILGGLIIGVGEKMSEVYLGSLVGGGIEIWFA---------YVLALVFLLFRPQG 299

Query: 339 LLRLR 343
           L   +
Sbjct: 300 LFGEK 304


>gi|307729164|ref|YP_003906388.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|307583699|gb|ADN57097.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
          Length = 341

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 104/320 (32%), Gaps = 20/320 (6%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
              L K      L+ ++          A      I  +     +  + A   + V+   G
Sbjct: 26  PTALQKLLAFASLILLLVFF--SFASPAFMQMDNILGILQATAVNGVLAIASTFVI-ITG 82

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+        A    +  + + L +WL +  +      CG I G  + K +      
Sbjct: 83  GIDLSVGTLMTFTAVICGVFLTYWHLPMWLGVLAAIATGAICGTISGTLTAKMKIPPFIA 142

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
              +M  +    L+              AD+  +   T    +        +++  + + 
Sbjct: 143 TLGMMLLLKGLSLV------------VSADKPIYFTDTENFYMISQDSLIGYLLPSLPIP 190

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +L +  L+ +  + L RTA+      +  N++A       +   K++ + +  A  G+
Sbjct: 191 NAVLILFVLAIASSITLNRTALGRYTFALGSNEEAVRLSGVNVDRWKIAIYGLGGAICGV 250

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
           AG   A+  +   P + +  E   + ++VI      GG  ++        I+  +     
Sbjct: 251 AGLLIASRLNSAQPALGQGYELEAIAAVVIGGTSLSGGSGTILGTIIGAFIMSVLTNGLR 310

Query: 300 GMNFYYFNSLLKFDCSFNMR 319
            M+      ++       + 
Sbjct: 311 IMSVAQEWQIVVTGLIIILA 330


>gi|289522281|ref|ZP_06439135.1| branched-chain amino acid ABC transporter, permease protein
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289504117|gb|EFD25281.1| branched-chain amino acid ABC transporter, permease protein
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 306

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 89/312 (28%), Gaps = 25/312 (8%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           L      + +    +  ++Y +   GLS++ G + +++        +  Y    LG    
Sbjct: 19  LPMAIFLQVVLDGLLNGMLYALITVGLSLIWGVMDVINFAHGEFLMVAMYVTYWLGFLMN 78

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +   +    SA       +I+    +        ++ L+ +     ++            
Sbjct: 79  VDPLISWIASAAFVFILSVIVYKLVISQLIGKPPLSALLATFGLSMLIKNICLNRFSPN- 137

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                          + +     P   +I  +    + +    +   I  ++ R+    A
Sbjct: 138 ---------FKLLSDTYLGGRVIPMGDLILPLPQLVIAIVSLIVITCIYRFMTRSRTGWA 188

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            +    ++ A   +           F +  A +G+AG                   ++I 
Sbjct: 189 IQATAMDRDAAELMGIDTSKIYALVFGIGGACVGVAGGLLPMYMPV--HPEAGSLFSLIA 246

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
              V LGG  S+     A  ++  V  L        F  +  F                 
Sbjct: 247 FVCVALGGFGSIVGSLLAAILVGLVEALVGFYVAPIFKYVAVFGLY-------------L 293

Query: 330 LVILMRSHSLLR 341
           +VIL+R   L  
Sbjct: 294 IVILIRPKGLFG 305


>gi|221214962|ref|ZP_03587930.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia multivorans CGD1]
 gi|221165189|gb|EED97667.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia multivorans CGD1]
          Length = 406

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 57/299 (19%), Positives = 102/299 (34%), Gaps = 12/299 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
               +  V      +       Q  +     Q    V+ A   ++ +G+ GLLS      
Sbjct: 7   FAAFVRWVLFAGCLVLPAWLWPQGAVLGYLAQTASLVVLALSYNLQLGTTGLLSFGHAAF 66

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             +GA++     +R+G  + LL  V        G + GL + +  G   A+ TL + E  
Sbjct: 67  AGLGAFAAAHWFNRFGGPLPLLPLVGGAAGAGFGFVAGLLATRRAGTAFAMITLGLGECV 126

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
                       G  G+ +                   +           Y V+   C  
Sbjct: 127 AAAAWSVPAWFGGIGGVPI------------DRASGTPWGGWQFGAPAQAYAVIAAWCIA 174

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           SA  +  L RT ++     +RDN     +L T     +L+    +S F G+AG       
Sbjct: 175 SALAMRALTRTPLARLANAVRDNPARVAALGTDPRRVRLAMVTCASFFAGIAGTLTLIDV 234

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  +PD    + +  V+   ++GG  +    A   A+L  +  +  GM+  +   L   
Sbjct: 235 EIATPDSVSMARSASVLIAAVIGGSGAFFGPAAGAAVLTALSVVVAGMSRAWALYLGVL 293


>gi|118592513|ref|ZP_01549904.1| ABC transporter, membrane spanning protein (ribose) [Stappia
           aggregata IAM 12614]
 gi|118434860|gb|EAV41510.1| ABC transporter, membrane spanning protein (ribose) [Stappia
           aggregata IAM 12614]
          Length = 340

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 92/305 (30%), Gaps = 11/305 (3%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
                    A  S     ++ +Q  +  +   G+++V+   G + L+     A+      
Sbjct: 35  IFAFSFGNAAFFSINNGLTVLLQTSVIGLLGIGMTMVI-ITGGIDLSVGSVLALSGTITG 93

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +           +       +    +   + +         +ATL M  I + + ++   
Sbjct: 94  LSIKAGVPVAPAMAIGVMAGAACGFVNGFVITKMR--ITPFVATLGMMLIARGVALQLT- 150

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
                    + +    LG      I          +    + Y ++ +  ++ +    LR
Sbjct: 151 --GAAPISRLGESFGLLGNGSLFRIVEKTGGIFPKVVFPGIPYPVILLAIVAVAGAYLLR 208

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R  I         N++A       +   K+ A+ +S A  G+AG    +    + P+   
Sbjct: 209 RRQIGRHIYATGSNEEAARLSGVLVDRTKIFAYVLSGALAGLAGNVLMSRLVTVQPNEGV 268

Query: 263 FSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             E       ++    ++GG+ ++S      AI+  +           F   +       
Sbjct: 269 MYELDAIAAAVIGGASLMGGVGNISGTMIGAAIIGVLRNGLNMAGVSAFIQQIVIGIIVI 328

Query: 318 MRHTT 322
           +    
Sbjct: 329 LAVYV 333


>gi|186470399|ref|YP_001861717.1| monosaccharide-transporting ATPase [Burkholderia phymatum STM815]
 gi|184196708|gb|ACC74671.1| Monosaccharide-transporting ATPase [Burkholderia phymatum STM815]
          Length = 341

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/320 (13%), Positives = 102/320 (31%), Gaps = 20/320 (6%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
              L K      L+ ++          A      I  +     +  + A   + V+   G
Sbjct: 26  PTALQKLLAFTSLILLLVFF--SFASPAFMQMDNILGILQATAVNGVLAIASTFVI-ITG 82

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+        A    +  + + L +W+ +  +      CG I G  + K +      
Sbjct: 83  GIDLSVGTLMTFTAVICGVFLTYWHLPMWIGVVAAIATGALCGTISGTLTAKMKIPPFIA 142

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
              +M  +    L+               D+  +   T    +       ++ +  + + 
Sbjct: 143 TLGMMLLLKGLSLV------------VSVDKPIYFTDTENFYMISQDSLIAYFLPSVPVP 190

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +L +  L+ +  + L RTA+      +  N++A       +   K++ + +  A  G+
Sbjct: 191 NAVLILFVLAIASSITLNRTALGRYTFALGSNEEAVRLSGVNVDRWKIAIYGLGGAICGV 250

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS-----LSKIAKATAILIGVVELCC 299
           AG   A+  +   P + +  E   + ++VI G   S     +        I+  +     
Sbjct: 251 AGLLIASRLNSAQPALGQGYELEAIAAVVIGGTSLSGGSGTILGTIIGAFIMSVLTNGLR 310

Query: 300 GMNFYYFNSLLKFDCSFNMR 319
            M+      ++       + 
Sbjct: 311 IMSVAQEWQIVVTGLIIILA 330


>gi|227502834|ref|ZP_03932883.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Corynebacterium accolens ATCC 49725]
 gi|227076564|gb|EEI14527.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Corynebacterium accolens ATCC 49725]
          Length = 313

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 96/310 (30%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  +   + LF+      +   + ++GIQ     + A+G++ V+ + G + L+     
Sbjct: 15  ALVGLIALCIALFIATPYFLTVANLLNVGIQAATVAILAFGMTFVIVTAG-IDLSVGSVA 73

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GA     + S  GL  WL + +   +      I G+ +   +                
Sbjct: 74  ALGAMVSAYMFSTAGLPGWLTLLIGLFVGALADAICGMATAWGKIPSFI----------- 122

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  S I      ++F          ++ M    
Sbjct: 123 -----------ATLAMMSIARGITLVISQGSPIETAPTVNAFGGDVFGFPVPIIMMVIAG 171

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N +A       +   +++ FA+S  F   AG   A   +
Sbjct: 172 VICWFILERTVLGRSMYAIGGNLEAARLSGLPVRRIQIAVFALSGFFAAWAGMVMAGRLE 231

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG    +       +L  +      +N   F   
Sbjct: 232 SAQPQAGTGYELDAIAAVVIGGASLSGGQGKATGTLVGAILLAVIRNGLNLLNVSSFWQQ 291

Query: 310 LKFDCSFNMR 319
           +       + 
Sbjct: 292 IVIGLVIALA 301


>gi|50118977|ref|YP_048144.1| ribose ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49609503|emb|CAG72936.1| ribose transport permease system protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 322

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 95/312 (30%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLILIAVVSALSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   +         ++  + +  +  +    G   G+   K +      ATL+M  + + 
Sbjct: 82  LTG-AVAASIVGLEVNALVAVFGALAVGALIGAGTGVIVSKGKVQAFI-ATLVMMLLLRG 139

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + +   +    G                      F    +   + +   +  M  + A
Sbjct: 140 VTMVYTNGSPVNTGFSDVA---------------DAFGWFGIGRPLGIPTPIWIMAIVFA 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 185 AAWYMLHHTRLGRYIYALGGNESATRLSGISVDKIKIIVYSLCGLLSALAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|27375995|ref|NP_767524.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27349134|dbj|BAC46149.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 336

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 108/334 (32%), Gaps = 16/334 (4%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  +    + L   +  L++ L    +       +     ++  + A GL++V G + +L
Sbjct: 12  KPKRDIAPILLPIALALLVIPLVGSPSTWLTLTAASLAMGMMIFIMASGLTLVFGLMDVL 71

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           +       A+GAY   ++ + +  SI    + ++  +     ++    S         + 
Sbjct: 72  NFGHGAFIAVGAYVATLVLAPFAASIQADSLWMNLAVLAPAALLSMAVSGALGLVVERVL 131

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            L +       ++              A     +            F    V    +   
Sbjct: 132 ILPVYGQHLKQILMTTGGLIVAEQTLYALWGPQIIPMPLPTSLRGSFILGDVAIAKYRVL 191

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
             L    +  +I L L RT +    R   +N++   +L   I    L  F   SA  G+ 
Sbjct: 192 ATLIGLAVFIAIQLVLNRTKLGLLIRAGVENREMVEALGYRIRRLFLGVFMTGSALAGLG 251

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  +A  R+++   M      +++  +VI+GG+ S+        ++  V      +    
Sbjct: 252 GVMWALYREQVHASMSD-DLTVLIFIVVIIGGLGSIGGCFIGAILVAMVANYGGFL---- 306

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
                              ++ +  +++ R   L
Sbjct: 307 ----------VPKLALVSNILLMVAILMWRPRGL 330


>gi|302556382|ref|ZP_07308724.1| ABC transporter integral membrane protein [Streptomyces
           viridochromogenes DSM 40736]
 gi|302474000|gb|EFL37093.1| ABC transporter integral membrane protein [Streptomyces
           viridochromogenes DSM 40736]
          Length = 343

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/318 (12%), Positives = 94/318 (29%), Gaps = 25/318 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +L +LAV+  +          +   +  +  Q  +  +   G++ V+ + G + L+
Sbjct: 36  RTLSLLGVLAVLVAVGGITAPDQFLATSNLQLVLTQASVIGVVTVGMTFVI-TSGGIDLS 94

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+ A  +    +        ++  + ++   CG++ GL     R      ATL M
Sbjct: 95  VGAMVAL-ASVWATTVATQEFGFAGILFTAVIVGVGCGLVNGLLIAYGRMVPFI-ATLAM 152

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
               + + ++                    G+T    +       +   Y + +  ++L 
Sbjct: 153 LASARGLALQITD-----------------GSTQVVTVPSVLDLGARDAYILGIPPLVLI 195

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              ++    L L RT        +  N +A       +   +L  + +S    G+A    
Sbjct: 196 FAAVTVIGWLLLNRTTFGRRTVAVGGNAEAARLAGIDVRRQRLYLYLLSGLCCGIAAFML 255

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFY 304
                          E   + + +I      GG  ++        +   +  +    N  
Sbjct: 256 IVLSGSGQNTNGNLYELDAIAAAIIGGTLLSGGRGTIIGSVLGVLVFTTITNIFALNNLE 315

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +            
Sbjct: 316 TAVQQIAKGAIIVAAVLV 333


>gi|241762793|ref|ZP_04760857.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
 gi|241368212|gb|EER62404.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
          Length = 285

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 99/288 (34%), Gaps = 27/288 (9%)

Query: 53  AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112
           A GL+++ G LG+++      Y +GAY       R   S  + +  + +++   G ++  
Sbjct: 18  AAGLTLIFGMLGVINFAHGAVYMLGAYISY-ETGRRTGSFLMGVLAATLLTALVGAVVEK 76

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
            +L+   +      LI++     +L        G     VA    + GT           
Sbjct: 77  LTLRPLYERPHFYQLILTFGLILVLSDLVRFIWGPGYQEVAIPPLWSGT----------V 126

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
                   ++  +V+     +S  + L L ++      R    + +    L   +   ++
Sbjct: 127 DMLGSTIPMYRLFVIGFGALISVGLYLVLEKSTFGMLVRAASSDAEMVRILGLPVGAIRM 186

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
           + FA+     G+AGA  A             +  I    +VILGG+ ++     A+ ++ 
Sbjct: 187 AVFAIGCGLSGLAGAIAAPLFPI--ELGMATNTIIDCFIVVILGGLGNIRGAIAASMLIG 244

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
            V  L       + +               +  + L   +L R   L 
Sbjct: 245 MVRALGYVYLPGWVD--------------IMTFVLLIGTLLTRPQGLF 278


>gi|291285174|ref|YP_003501992.1| Ribose transport system permease protein rbsC [Escherichia coli
           O55:H7 str. CB9615]
 gi|290765047|gb|ADD59008.1| Ribose transport system permease protein rbsC [Escherichia coli
           O55:H7 str. CB9615]
          Length = 321

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 90/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                   Q 
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGAIVAKGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        +     ++G+ FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A       +   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|316934565|ref|YP_004109547.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315602279|gb|ADU44814.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 291

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 92/265 (34%), Gaps = 12/265 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+++ G L +++      Y +GA+    L +  GL+ W  + +
Sbjct: 12  LLVGLINGSFYALLSLGLAVIFGMLNIINFAHGALYMMGAFCAYFLLNLLGLNYWWALIL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +I G  GM+M    L++      +  L+++     I+        G +G+  A     
Sbjct: 72  SPIIVGLFGMVMERTLLQWLSGLDHLYGLLLTFGVALIIQGVFQNYFGSSGLPYAIP--- 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                            F+   ++  +V++    +       + RT +    R   +N  
Sbjct: 129 -------EQLRGAINLGFMYLPVYRGWVVVFSLVVCLLTWFMIERTRLGAYLRAATENPT 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       + +      +AG   A         +      I+V ++V++GGM
Sbjct: 182 LVRAFGINVPRMITLTYGLGVGLAALAGVLSAPINQV--RPLMGADLIIVVFAVVVIGGM 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNF 303
            S+         L  +  L      
Sbjct: 240 GSIMGSIITGFALGVIEGLTKYFYP 264


>gi|260430270|ref|ZP_05784244.1| inner-membrane translocator [Citreicella sp. SE45]
 gi|260418742|gb|EEX11998.1| inner-membrane translocator [Citreicella sp. SE45]
          Length = 610

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/330 (13%), Positives = 92/330 (27%), Gaps = 51/330 (15%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  L+         +   + ++        + + G+  V+  LG + L+     
Sbjct: 40  VFIGLLLITLVFSSLNPVFLAPNNLVNLLFDAAAIGLISLGVVCVL-LLGEIDLSIGSMS 98

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL------------ 122
            + +    +L    GL + L I  + +   A G I G    KF                 
Sbjct: 99  GLSSALVGVLWVNSGLPMLLAIFGAVLAGAAVGFIYGFLRNKFEMPSFVATLAGLLALLG 158

Query: 123 ----------------------AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
                                     LIM      +           +G+    R     
Sbjct: 159 LQLYLLGATGSINLPYTSPLVKFGQILIMPAWLSYLAAILPGALMVFSGLKTMKRRRDAN 218

Query: 161 TTVRSLIRFFRFPSSFVIYEIF----------MYYVLLGMCFLSASIILWLRRTAISNAW 210
            +   L           +  I           + Y+         ++   LRRT    + 
Sbjct: 219 LSSPGLSVLLVRAGVLTVALIGCVAYLEQGRGVPYMFGVFTLFIVALDYALRRTQWGRSM 278

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N +A      ++   +LSAF + S+   + G F A+     S        N+  I
Sbjct: 279 FAVGGNAEAARRSGISVKRIRLSAFMLCSSLAALGGVFAASRLASASQQAGTGDVNLNAI 338

Query: 271 SIVIL------GGMTSLSKIAKATAILIGV 294
           +  ++      GG  S         ++  +
Sbjct: 339 AAAVIGGTSLFGGRGSAWSALLGIIVIQAI 368


>gi|170740062|ref|YP_001768717.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168194336|gb|ACA16283.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 290

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 85/282 (30%), Gaps = 18/282 (6%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--YVILGSRYGLSIWLLIPVSAMISG 104
           +IY   A+G  +   +   L+     A  +GA     ++  + Y L + L++     +  
Sbjct: 16  MIYAAIAFGYQLTFATSKTLNFGQGEALMLGALFGLTLVPFTGYWLMLPLVLVFGFALGA 75

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
               +   P++K + +Y  I   I   I    + +                         
Sbjct: 76  LVERLGVRPAVKIKSEYGWIMATIALGIIFKNVAENIW--------------GRDDLKFP 121

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           S +         V        V+ G   +  ++ L+ RR+    A     ++  A   + 
Sbjct: 122 SPLPEAALTFGGVRVLPMELLVVAGALLMMLAVELFNRRSIWGKAVVATSNDIDAAGLMG 181

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                    ++A+S+     AG   A     ++         +   ++ I+GG+ S   +
Sbjct: 182 INTRKVITLSYAISAMTAAFAGVLVAPV--TLTGATMGSVLALKAFAVAIIGGLESGLGV 239

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
                IL     L        +  +        +     + +
Sbjct: 240 IVGGLILGVAETLTGFYISTGYKDVPGLILLLLVLAVRPVGL 281


>gi|126734800|ref|ZP_01750546.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter sp. CCS2]
 gi|126715355|gb|EBA12220.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter sp. CCS2]
          Length = 306

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 106/308 (34%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + A GL+++ G +GL++L     Y                +  +    
Sbjct: 10  VLNGLQFGIMLFLMAAGLTLIFGVMGLINLAHGSLYM----------VGAFAAAAVAGLT 59

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            + +      +          + + I  L  ++    +L  +  I     G       + 
Sbjct: 60  GSFVLALMAAMAAAAIAGVLVETVVIRRLYAADHLDQVLATFALILIFSEGTRWVFGSFP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   + + +         + Y ++  +++     ++A + L + RT I    R   ++++
Sbjct: 120 LFLNIPAYLSGPITLPGGIEYPLYRLFLIGIGLLVAAGLGLLITRTRIGIQIRAGENDRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+
Sbjct: 180 MIAALGVDISRLYTLVFALGAALAGLAGALVGAIQSV--QVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD---CSFNMRHTTLMVIALFLVILMR 335
            S+      + ++     L        F   ++      S +   +  + I +  V++ R
Sbjct: 238 GSIKGALIGSILVGLTDTLGGIFLPQLFKLFMEPATAQTSGSALASMAIYILMAAVLIWR 297

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 298 PTGLFGAR 305


>gi|332525962|ref|ZP_08402103.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2]
 gi|332109513|gb|EGJ10436.1| inner-membrane translocator [Rubrivivax benzoatilyticus JA2]
          Length = 341

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/335 (14%), Positives = 110/335 (32%), Gaps = 33/335 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL+++   +G+L+      Y +GAY         G   WL + V
Sbjct: 10  LLNGLSVGLLLFLLASGLTLIFSLMGVLNFAHASFYMLGAYVGA--TVAAGAGFWLALLV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  G       L+       +A L+++     ++++   +  G+  +        
Sbjct: 68  APLVVGLAGAAFERWVLRRVHAQGHVAELLVTFGLAYVVVEAVQLVWGRQPLAFEPPAAL 127

Query: 159 LGTTVR---------------SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
            G                                 +     + +     L A + L LR 
Sbjct: 128 AGPLFTLVQAPAGLALAWGAAPEACRGDAALVCTQFPALRAFAMALALLLLAVLALALRT 187

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R    + +   +L   +    +  F   +A   +AG    A   R++      
Sbjct: 188 TRLGLVIRAALTHPQMAQALGHDVPRVFMLVFGAGTALAALAGVVGGA--MRVTEPSMAQ 245

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVEL--------------CCGMNFYYFNSL 309
           +   +V +++++GG+ SL+    A+ +L  +                           +L
Sbjct: 246 AVGPVVFALIVIGGLGSLAGAFVASLLLGVLDSFAVASDRSLADLAAALHWTLAPETAAL 305

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             +    +     L  + L LV+++R   L   R 
Sbjct: 306 ALWSVKLSQVAAILPYLLLVLVLVLRPRGLFGTRE 340


>gi|146340781|ref|YP_001205829.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. ORS278]
 gi|146193587|emb|CAL77604.1| Putative Branched-chain amino acid ABC transporter (permease
           protein); livH-like protein [Bradyrhizobium sp. ORS278]
          Length = 291

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 87/305 (28%), Gaps = 20/305 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G +++ G  G+L+L+        A +        G+  +    +
Sbjct: 7   LIDGFAISALYALGATGFTLIFGVSGVLNLSHGAIMVGAAVAAWAAAGELGVGPYTGALI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +            +++         +  ++E  + I I    +  G          + 
Sbjct: 67  GVLAGLVLAFATYFIAVRP-----IQLSKAIAESEKEIFILTATLLWGIIIQEAIAYFFT 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I         V      Y+  +        +   + RT    A      N +
Sbjct: 122 NNAKTVLPIVEGVTTVFGVRTPRNEYFTAVICWVAIGLLWFLVNRTRRGKAVMAASMNPR 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +    L+ +A+     G+AG          S  +   +      SIV+LGG+
Sbjct: 182 GVTLLGIELSSIYLTVWAIYGLLAGVAGILLGMFLGVSSYSVGPLT--ASAFSIVVLGGL 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+S    A  ++  +      +    + ++        +             + +R   
Sbjct: 240 GSVSGSLIAAYVVGYLETGTAYLISPAYRTIPALLLLVVV-------------MYLRPQG 286

Query: 339 LLRLR 343
           L   R
Sbjct: 287 LFGRR 291


>gi|58616659|ref|YP_195868.1| putative membrane spanning protein [Achromobacter xylosoxidans A8]
 gi|58416250|emb|CAI47844.1| putative membrane spanning protein [Achromobacter xylosoxidans]
          Length = 311

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/292 (15%), Positives = 100/292 (34%), Gaps = 16/292 (5%)

Query: 56  LSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           L++V G +  ++L     Y +GAY   +        + L    +   S A G+I+   ++
Sbjct: 33  LTLVFGIMSFVNLAHGSLYMLGAYFAALTFKNTDS-LTLAFFAAIFGSIAVGVILERLAV 91

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                   +  ++++        +   I  G    ++    +   T              
Sbjct: 92  SRLYSRDHLDHVLVTFGMVLFFNEMVQILWGTQPYFLPVPAWLDST----------VSIF 141

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
            + Y  + + +++    ++      + +T +    R    N K   +L   I F     F
Sbjct: 142 GINYPAYRFAIIVVGLLVAVGPHAVINKTRLGMLIRAGSVNPKMVGALGVNIKFLNALLF 201

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            + +A  G+AG   +      S         I  + ++++GG+ S+S    A  I+  V 
Sbjct: 202 GLGAALAGLAGVMASPILSIQS--GMGDPVLITTLVVIVIGGIGSVSGAFYAALIVGVVD 259

Query: 296 ELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMRSHSLLRLRT 344
            L            +  D +        + L+ + + +V+ +R   L   R 
Sbjct: 260 TLGRAFLPMILREFMARDIANAAGPAIASMLIYVLMAVVLALRPQGLFGARR 311


>gi|315652938|ref|ZP_07905904.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Eubacterium saburreum DSM 3986]
 gi|315484796|gb|EFU75212.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Eubacterium saburreum DSM 3986]
          Length = 331

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 88/272 (32%), Gaps = 18/272 (6%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             S   + ++   +    + A G+++++  LG + L+      + +     L  R GL +
Sbjct: 43  FLSVPNLMNVLRAVSETGIIAIGMTMIL-ILGDIDLSVGSIVGLVSTGCASLMVRNGLGM 101

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           +  + +S +I G  G+  GL   K +       TL    I + +   W            
Sbjct: 102 FPAVLLSLLIGGLYGLFNGLCVTKLKLQAFI-VTLASMNIARGLARFWSNGVGIPLAYGK 160

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
            +        +     F   P+  +I+   +      +            +TA       
Sbjct: 161 GEGFAPPAFGLLQEKAFGVIPAPVIIFISLLLIFQCVLS-----------KTAFGRKVYA 209

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N+ A +     +   K+ AF + S    +A    AA   +  P+     E   V + 
Sbjct: 210 IGGNKNASYLAGIPVDRIKIIAFVLCSMLSAVAAMIHAAQISQGGPNEGIGYELNAVAAC 269

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCC 299
            I      GG  ++        IL  +  +  
Sbjct: 270 AIGGTSLAGGKGTMMGTLVGAVILGLLDNVLG 301


>gi|311107609|ref|YP_003980462.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310762298|gb|ADP17747.1| inner-membrane translocator 46 [Achromobacter xylosoxidans A8]
          Length = 285

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 57/304 (18%), Positives = 107/304 (35%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++Y + A GLSIV G L  ++      Y +GAY       ++GL+ WL + +
Sbjct: 8   IINGIGVGMLYFLLAVGLSIVFGLLRFVNFAHGAFYLLGAYFC-FQAIQWGLNFWLALAI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ GA   +     L+          ++++     +L +   +  G  G  VA     
Sbjct: 67  VPLLVGAFAWVTEKVLLRHVYAQAHEFHILITVGLALVLQELVIVIWGPIGDNVAAPSAL 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                 IY  +  +V+      S  +   L  T + +A R   ++ +
Sbjct: 127 QGV----------VMWGSFIYPKYRLFVIGFTAVFSLLLWYVLEGTRLGSAVRAGSESTE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       FA+ +A   +AG   A  R              I   IV++GGM
Sbjct: 177 MVSMLGINVFRMFSLVFALGAATAALAGVLAAPIRGV--EPFMGIEALGIAFVIVVVGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         ++  V  +   +              +      ++ +A+  V+L+R H 
Sbjct: 235 GSFFGALVGGLLIGVVQSVMSTL--------------WPEGARLMIYVAMAAVLLLRPHG 280

Query: 339 LLRL 342
           L+  
Sbjct: 281 LMGR 284


>gi|209519894|ref|ZP_03268676.1| Monosaccharide-transporting ATPase [Burkholderia sp. H160]
 gi|209499654|gb|EDZ99727.1| Monosaccharide-transporting ATPase [Burkholderia sp. H160]
          Length = 342

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 98/311 (31%), Gaps = 18/311 (5%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +     ++  +       A      I  +     +  + A   + V+   G + L+    
Sbjct: 33  LAFASLILLLVFFSFASPAFMQMDNILGILQATAVNGVLAIAATFVI-ITGGIDLSVGTL 91

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
               A    +  + + L +W+ +  +      CG + G  + K +               
Sbjct: 92  MTFTAVICGVFLTYWHLPMWMGVLAALATGAVCGTVSGTLTAKMKIPPFIAT-------- 143

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
               +    +  G + +  AD+  +   T             + +  + +   +L + FL
Sbjct: 144 ----LGMMMLLKGLSLVVSADKPIYFTDTENFYRISQDSLIGYFLPSVPIPNAVLILFFL 199

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +    + L RTA+      +  N++A       +   K++ +    A  G+AG   A+  
Sbjct: 200 AIVSSITLNRTALGRYTFALGSNEEAVRLSGVNVDRWKIAIYGTGGAICGIAGLLIASRL 259

Query: 254 DRISPDMFKFSENIIVISIVILGGMTS-----LSKIAKATAILIGVVELCCGMNFYYFNS 308
           +   P + +  E   + ++VI G   S     +        I+  +      M+      
Sbjct: 260 NSAQPALGQGYELDAIAAVVIGGTSLSGGSGTILGTIIGAFIMSVLTNGLRIMSVAQEWQ 319

Query: 309 LLKFDCSFNMR 319
           ++       + 
Sbjct: 320 IVVTGLIIILA 330


>gi|260599996|ref|YP_003212567.1| ribose ABC transporter permease [Cronobacter turicensis z3032]
 gi|260219173|emb|CBA34528.1| Ribose transport system permease protein rbsC [Cronobacter
           turicensis z3032]
          Length = 321

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 92/312 (29%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTVNNMLNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L      ++  ++   A+ +    +   + +      ++A   +++      
Sbjct: 82  LTGAVAASLVGIEVNALVAVVAALALGAAIGAVTGVIVAKGRVQAFIATLVMML------ 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G    Y        G    + +  +      +     ++ + L       
Sbjct: 136 -------LLRGVTLEYTNGSPVSTGFNDNADLFGWFGIGRPLGIPTPVWIMALVFLVTWY 188

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +      T +      +  N+ A      ++   K+  +++S     +AG    A    
Sbjct: 189 VLH----HTRLGRYIYALGGNEAATRLSGISVNKIKIIVYSLSGLLASLAGVIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPLAGAGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNSLNLLGVSPYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|302342446|ref|YP_003806975.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075]
 gi|301639059|gb|ADK84381.1| inner-membrane translocator [Desulfarculus baarsii DSM 2075]
          Length = 334

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/326 (11%), Positives = 97/326 (29%), Gaps = 23/326 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           I +      +Y + A G +++  S  +++        +G Y  + L +      +     
Sbjct: 8   IITGLAIGSVYALVAMGFALIYKSTSIINFAQGEFVLVGGYVALWLYTDLRGLAFEALAQ 67

Query: 94  -----------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
                          +  + +     I+    +    + L +  +I   I   I++    
Sbjct: 68  ARPEVFAALSPAGWQLVVVAAAFLLTIVAGLVMVLALERLILRPMIGEPIISVIMVTIAL 127

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
            T  K  + +               +        +       ++         S  L+ +
Sbjct: 128 ATVLKGLVTLIWETQIRNFDPPIFQQQDGLRLGVITLPGVYLWIFFFAALFLVSFALFFK 187

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            T +  + R +  +Q+   S+  ++      ++++ +    + G                
Sbjct: 188 FTRVGVSMRAVAADQQVAQSMGISVKTVFAISWSIGAVVAVVGGMLVGNINGVNIELSH- 246

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGV----VELCCGMNFYYFNSLLKFDCSFNM 318
               + V   VILGG+ S+        ++  V     EL       Y  +      +   
Sbjct: 247 --FGLTVFPAVILGGLESVGGAIIGGLVIGLVQYLGPELVGQAVALYNRAFDAALVTPGN 304

Query: 319 RHTTLMVIALFLVILMRSHSLLRLRT 344
               L  + L  ++++R + L  ++ 
Sbjct: 305 LEAVLPFVVLIAILMVRPYGLFGIKE 330


>gi|283780418|ref|YP_003371173.1| inner-membrane translocator [Pirellula staleyi DSM 6068]
 gi|283438871|gb|ADB17313.1| inner-membrane translocator [Pirellula staleyi DSM 6068]
          Length = 401

 Score = 61.8 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 92/306 (30%), Gaps = 11/306 (3%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDS--MGIQILIYVMFAWGLSIVVGS 62
            LR N+   ++ ++             +        +  +     +  +FA G ++V+  
Sbjct: 9   PLRFNEIALVIAIIVTALITNAADSNHSYFRDPLTSAKEVARYTAVLGIFALGATVVI-I 67

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G + L+     A G+ +             +        + A  + + + +    G   
Sbjct: 68  SGGIDLSVGSMIAFGSTACCTTMLILAPKELIAYQPVGATTIAIALGVTMLAGLLVGT-- 125

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
             A LI +      +     +   ++             T    ++   +   F      
Sbjct: 126 LHAWLITAVRLPPFVATLATLVGLRSLSRALCENVTTQVTGAKSVQITVYDPFFRAINNN 185

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           ++Y ++    L+    + L  T +      +  N++A           K  A+   S   
Sbjct: 186 VWYSVVTFAVLAIITWIILSYTVLGRHLYALGGNEQAAKLSGIRTERIKWFAYCYGSVTA 245

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVE 296
            +A  FF A +    P +      +  I+  ++      GG+ ++         L  V++
Sbjct: 246 SIASLFFIAYQAGADPVLQGLGSELNAIAAAVVGGCSLQGGVGTIMGTVLGALFLRVVID 305

Query: 297 LCCGMN 302
               + 
Sbjct: 306 AVSKVI 311


>gi|302338180|ref|YP_003803386.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
 gi|301635365|gb|ADK80792.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
          Length = 343

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/321 (9%), Positives = 94/321 (29%), Gaps = 25/321 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  +    + L  +V   ++ +      +   + ++  Q  +  + + G  + + + G +
Sbjct: 32  KKRRGSLGIILSLIVLCAIISILSPRFLTLANLKNVLSQATVSAVISVGEFLAILTAG-I 90

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+      I     G++  + + +   +    G++ GL   K +  +  I+T
Sbjct: 91  DLSIGSILALSIMMMGIFAVNLGINPIVAMLLCLAVGSLFGLVNGLLLTKLKLPHPFIST 150

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           +    I + + +                                            +   
Sbjct: 151 MGTKMIARGLALAVT-------------------AAAPISGFALSIQYLGSSSIGPIPAS 191

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +  + A + +++  TA+      +  N +A       +       + +S     +AG
Sbjct: 192 VLLVVIVYAVMYIFMTYTAVGRHIYAVGGNVEASRLSGINVDKVLCIVYTLSGFMSALAG 251

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
                  +   P      E   + +++I      GG+  +        I+  +      +
Sbjct: 252 ILLVGRVNAAYPLAGTDYETDAIAAVIIGGASFAGGVGKILNTIIGVMIIAVLRNGLNLL 311

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
           N       +       +    
Sbjct: 312 NVDSAYQTVAIGVVIILAVYL 332


>gi|229844337|ref|ZP_04464477.1| ribose ABC transporter permease protein [Haemophilus influenzae
           6P18H1]
 gi|229812586|gb|EEP48275.1| ribose ABC transporter permease protein [Haemophilus influenzae
           6P18H1]
          Length = 322

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 86/301 (28%), Gaps = 23/301 (7%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           + +      S   I ++  Q  +  + A G++ V+   G + L+     A+       + 
Sbjct: 30  VSVINPDFFSVDNILNILRQTSVNAIIAVGMTFVILIAG-IDLSVGSVLALTGAIAASMV 88

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           S       ++  V  + +    +   + +                + F   L+    +  
Sbjct: 89  SIELPIFLVIPVVLLIGTLLGSISGVIVAK------------GKVQAFIATLVTMTLLRG 136

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                     +    +    L     F S    Y + +   +  M  + A     L+ T 
Sbjct: 137 VTMVYTDGRPITTGFSDNADL-----FASIGTGYFLGIPVPIWIMSIVFAVAWYILKHTP 191

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           I      +  N+ A       +   K+  FA S     +AG    +      P      E
Sbjct: 192 IGRYIYALGGNESATQLSGINVNKIKVFVFAASGFLSALAGLIVTSRLSSAQPTAGVSYE 251

Query: 266 NIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              + ++V+     +GG   +        I+  +      ++   +  ++       +  
Sbjct: 252 LDAIAAVVVGGTSLMGGKGRVMGTLIGALIIGFLNNALNLLDISSYYQMIAKALVILVAV 311

Query: 321 T 321
            
Sbjct: 312 L 312


>gi|154687712|ref|YP_001422873.1| RbsC [Bacillus amyloliquefaciens FZB42]
 gi|154353563|gb|ABS75642.1| RbsC [Bacillus amyloliquefaciens FZB42]
          Length = 323

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 101/300 (33%), Gaps = 25/300 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +   +      I ++  Q+ I  + A+G++ V+   G + L+     A+ +     +   
Sbjct: 38  VLNPSFLEPLNILNLLRQVAINALIAFGMTFVI-LTGGIDLSVGAILALSSALVAGMMVS 96

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             +   L + +  +I    GMI GL   K +      ATL    +F+ + +         
Sbjct: 97  G-IDPILAVIIGCVIGAVLGMINGLLITKGKMAPFI-ATLATMTVFRGLTL--------- 145

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                   +Y  G  +  L   + F      Y + +    + M    A++ + L +T   
Sbjct: 146 --------VYTDGNPITGLGSNYAFQLFGRGYFLGIPVPAITMLIAFAALWVLLHKTPFG 197

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                I  N+KA       +   K+  ++++     +AGA   +  +   P   +  E  
Sbjct: 198 RRTYAIGGNEKAALISGIKVPRIKIMIYSLTGLLSALAGAILTSRLNSAQPTAGESYELD 257

Query: 268 IVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V     + GG   +        I+  +      +    F  L+       +    
Sbjct: 258 AIAAVVLGGTSLSGGRGRIIGTLIGVLIIGTLNNGLNLLGVSSFYQLVVKGIVILIAVLL 317


>gi|153212592|ref|ZP_01948339.1| ribose transport system permease protein RbsC [Vibrio cholerae
           1587]
 gi|229521783|ref|ZP_04411201.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           TM 11079-80]
 gi|254285906|ref|ZP_04960868.1| ribose transport system permease protein RbsC [Vibrio cholerae
           AM-19226]
 gi|124116463|gb|EAY35283.1| ribose transport system permease protein RbsC [Vibrio cholerae
           1587]
 gi|150424088|gb|EDN16027.1| ribose transport system permease protein RbsC [Vibrio cholerae
           AM-19226]
 gi|229341377|gb|EEO06381.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           TM 11079-80]
          Length = 329

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/326 (11%), Positives = 90/326 (27%), Gaps = 26/326 (7%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            ++   Y      + +     + L      S   + ++  Q     + A G++ V+ +  
Sbjct: 17  PIQWRDYIIYFVFVGIFIFFSVMLHDKGFLSSVNLMNIARQTATIAIMAVGMTFVLSAA- 75

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+     A+ A    +   +   SI + +  + ++    G I G+   +        
Sbjct: 76  EIDLSFGATVALAAIVSAL-TLQETDSILMAVSAALLVGTMIGFINGIFVTQVGIPSF-- 132

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
                             +T G  GI      +        +                  
Sbjct: 133 -----------------LVTLGTTGIITGIARWSTSLQSIPIDNDTYAFIFGSGDIGPFS 175

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            + +    ++A     LR T           N+ +       +   KL    ++     +
Sbjct: 176 VLFIWTLLVAAVGAFVLRNTTFGKHVLATGGNKVSAMYSGINVNRIKLYVLMLNGFLAAL 235

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
           AG  ++         + +    +++ +++I      GG  ++        I+  V     
Sbjct: 236 AGILYSGRLYSARYTLGESDLMLVIAAVIIGGTSLFGGKGTVIGSVIGALIMGMVNNGLI 295

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMV 325
            M       L+       +  T  M 
Sbjct: 296 LMGLNVDQQLILRGIIVIVAVTFTMG 321


>gi|319782100|ref|YP_004141576.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317167988|gb|ADV11526.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 291

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 106/303 (34%), Gaps = 26/303 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
             Q  +Y M A GL++V  ++G+ + +  +   +GAY    L      +         ++
Sbjct: 12  LFQGSLYAMMAVGLALVWTTIGVFNFSHGVFMMLGAYIAWQLVELGLPAAVAFPIAVVVM 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +G   ++                   +      +++    +  G      A  ++   + 
Sbjct: 72  AGVGWILQASVVRPL-----------IGRPNIVLVVVITTLAAGSLIENGALTIWGPRSK 120

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +         V   +    +++    + A++ ++L RT +  A R +  N+ A   
Sbjct: 121 QIPALITGNTTVGGVGVSLHQIAIIVITPLILAALCMFLNRTRLGLALRAVAQNEDASHL 180

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +      AFA++++  G+AG F    R      +      +  + +V+ GG++S+S
Sbjct: 181 VGLNVTALYGLAFAIAASLAGLAGIFMGGYRFM--SPVMGSDPLLKALIVVVFGGISSIS 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A  ++      C      Y+   L F               L L +++R   +   
Sbjct: 239 GPIFAAYLIGFFEAACSYYFGLYWTPALLFG-------------VLILTLMVRPEGIFAS 285

Query: 343 RTP 345
           R+ 
Sbjct: 286 RSR 288


>gi|309704198|emb|CBJ03545.1| ribose ABC transporter, permease protein [Escherichia coli ETEC
           H10407]
          Length = 321

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 90/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                   Q 
Sbjct: 82  LTGAVAASIVGIEVNALVAIAAALALGAAIGAVTGVIVAKGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        +     ++G+ FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A       +   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|220923605|ref|YP_002498907.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219948212|gb|ACL58604.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 291

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 99/305 (32%), Gaps = 28/305 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY++ A GLS++    G+++L     +AIGAY    +     L     +  
Sbjct: 10  VVNGLFLGAIYLLIALGLSLIFSLGGIVNLAHGAFFAIGAYLT--IVLSPVLGFGGALVA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  I G  G+++     +       I +L+++     +  +   +  G   +  +     
Sbjct: 68  APAIVGIIGLVVERVLFRRFYRADPILSLLLTFGLAMVAEQALRMIFGAPPLPYSIPQAL 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                 +   +   +L  +    A++   L+RT      R    N  
Sbjct: 128 RGQLF----------LGDFVLSRYRLSILAAVVLAVAAVWYLLQRTTFGRVVRAGVQNPD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L  ++     +   +S     +AG   A                     +V++GG+
Sbjct: 178 MVAALGISLKPYMAAVVFISVGLAALAGVMLAPITGV--HPAMGAEVLTGAFVVVVIGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S   +  A  I+  V  L   +   +  +               +   + +++L+R   
Sbjct: 236 GSFWGVVAAALIVGVVRGLMVLVYPGFAEAA--------------IYALMAIILLVRPRG 281

Query: 339 LLRLR 343
           L   R
Sbjct: 282 LFGER 286


>gi|126738983|ref|ZP_01754679.1| ABC transporter permease protein [Roseobacter sp. SK209-2-6]
 gi|126720164|gb|EBA16871.1| ABC transporter permease protein [Roseobacter sp. SK209-2-6]
          Length = 306

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 109/306 (35%), Gaps = 15/306 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + A GL++V G +GL++L     Y +GA++   +    G  +  L+  
Sbjct: 10  VLNGLQFGVMLFLMAAGLTLVFGVMGLINLAHGALYMVGAFAAAAVAGATGSFLLALVAS 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A  + A  ++      +              +    +L  +  I     G       + 
Sbjct: 70  LAAAAAAGALVEVTVIRRLYDR----------DHLDQVLATFALILIFSEGTRWVFGSFP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   V   +         + Y ++   ++     + A +   + RT I    R    +++
Sbjct: 120 LFLDVPEYLSGPVTLPGGIKYPLYRLTIIAIGLVVGAGLFWLIARTRIGIQIRAGEADRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+
Sbjct: 180 MIAALGVDISKLYTLVFALGAALAGLAGALVGAIQSV--QVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN---MRHTTLMVIALFLVILMR 335
            S+        ++     L        F  +++   + +      + L+ I + LV+L+R
Sbjct: 238 GSIKGALVGALLVGLTDTLGGVFLPLLFALMMEPATATSLGASLASMLIYILMALVLLVR 297

Query: 336 SHSLLR 341
              L  
Sbjct: 298 PSGLFG 303


>gi|15833946|ref|NP_312719.1| ribose ABC transporter permease protein [Escherichia coli O157:H7
           str. Sakai]
 gi|16131618|ref|NP_418206.1| D-ribose transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|26250496|ref|NP_756536.1| ribose ABC transporter permease [Escherichia coli CFT073]
 gi|74314271|ref|YP_312690.1| ribose ABC transporter permease [Shigella sonnei Ss046]
 gi|89110257|ref|AP_004037.1| D-ribose transporter subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|91213277|ref|YP_543263.1| ribose ABC transporter permease [Escherichia coli UTI89]
 gi|117626021|ref|YP_859344.1| ribose ABC transporter permease protein [Escherichia coli APEC O1]
 gi|157155741|ref|YP_001465240.1| ribose ABC transporter permease protein [Escherichia coli E24377A]
 gi|157163232|ref|YP_001460550.1| ribose ABC transporter permease protein [Escherichia coli HS]
 gi|168752406|ref|ZP_02777428.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4113]
 gi|168753652|ref|ZP_02778659.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4401]
 gi|168768036|ref|ZP_02793043.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4486]
 gi|168777884|ref|ZP_02802891.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4196]
 gi|168780654|ref|ZP_02805661.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4076]
 gi|168786593|ref|ZP_02811600.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC869]
 gi|168800975|ref|ZP_02825982.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC508]
 gi|170022213|ref|YP_001727167.1| ribose ABC transporter permease protein [Escherichia coli ATCC
           8739]
 gi|170083250|ref|YP_001732570.1| sugar ABC transporter membrane protein [Escherichia coli str. K-12
           substr. DH10B]
 gi|170683105|ref|YP_001746080.1| ribose ABC transporter permease [Escherichia coli SMS-3-5]
 gi|188492363|ref|ZP_02999633.1| ribose ABC transporter, permease protein [Escherichia coli 53638]
 gi|191169190|ref|ZP_03030946.1| ribose ABC transporter, permease protein [Escherichia coli B7A]
 gi|191170427|ref|ZP_03031980.1| ribose ABC transporter, permease protein [Escherichia coli F11]
 gi|193063863|ref|ZP_03044950.1| ribose ABC transporter, permease protein [Escherichia coli E22]
 gi|193071618|ref|ZP_03052524.1| ribose ABC transporter, permease protein [Escherichia coli E110019]
 gi|194428136|ref|ZP_03060680.1| ribose ABC transporter, permease protein [Escherichia coli B171]
 gi|194435570|ref|ZP_03067673.1| ribose ABC transporter, permease protein [Escherichia coli 101-1]
 gi|195936377|ref|ZP_03081759.1| ribose ABC transporter permease protein [Escherichia coli O157:H7
           str. EC4024]
 gi|208809677|ref|ZP_03252014.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4206]
 gi|208813335|ref|ZP_03254664.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4045]
 gi|208820556|ref|ZP_03260876.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4042]
 gi|209396828|ref|YP_002273278.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4115]
 gi|209921231|ref|YP_002295315.1| ribose ABC transporter permease [Escherichia coli SE11]
 gi|215489088|ref|YP_002331519.1| ribose ABC transporter permease protein [Escherichia coli O127:H6
           str. E2348/69]
 gi|217324224|ref|ZP_03440308.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. TW14588]
 gi|218556321|ref|YP_002389235.1| ribose ABC transporter permease [Escherichia coli IAI1]
 gi|218560825|ref|YP_002393738.1| ribose ABC transporter permease protein [Escherichia coli S88]
 gi|218692038|ref|YP_002400250.1| ribose ABC transporter permease [Escherichia coli ED1a]
 gi|218697476|ref|YP_002405143.1| ribose ABC transporter permease protein [Escherichia coli 55989]
 gi|218707396|ref|YP_002414915.1| ribose ABC transporter permease protein [Escherichia coli UMN026]
 gi|227883972|ref|ZP_04001777.1| ribose ABC superfamily ATP binding cassette transporter permease
           protein [Escherichia coli 83972]
 gi|237703551|ref|ZP_04534032.1| ribose transport system permease rbsC [Escherichia sp. 3_2_53FAA]
 gi|238902841|ref|YP_002928637.1| D-ribose transporter subunit [Escherichia coli BW2952]
 gi|253775614|ref|YP_003038445.1| ribose ABC transporter permease [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254038969|ref|ZP_04873021.1| ribose transport system permease rbsC [Escherichia sp. 1_1_43]
 gi|254163703|ref|YP_003046811.1| ribose ABC transporter permease [Escherichia coli B str. REL606]
 gi|254795756|ref|YP_003080593.1| ribose ABC transporter permease [Escherichia coli O157:H7 str.
           TW14359]
 gi|256021228|ref|ZP_05435093.1| ribose ABC transporter permease protein [Shigella sp. D9]
 gi|256025519|ref|ZP_05439384.1| ribose ABC transporter permease protein [Escherichia sp. 4_1_40B]
 gi|260846465|ref|YP_003224243.1| D-ribose high-affinity transport system RbsC [Escherichia coli
           O103:H2 str. 12009]
 gi|260857835|ref|YP_003231726.1| D-ribose high-affinity transport system RbsC [Escherichia coli
           O26:H11 str. 11368]
 gi|260870484|ref|YP_003236886.1| D-ribose high-affinity transport system RbsC [Escherichia coli
           O111:H- str. 11128]
 gi|261225907|ref|ZP_05940188.1| D-ribose transporter subunit; membrane component of ABC superfamily
           protein [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258952|ref|ZP_05951485.1| D-ribose high-affinity transport system RbsC [Escherichia coli
           O157:H7 str. FRIK966]
 gi|293407387|ref|ZP_06651309.1| rbsC [Escherichia coli FVEC1412]
 gi|293413200|ref|ZP_06655866.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293464076|ref|ZP_06664490.1| rbsC [Escherichia coli B088]
 gi|298383129|ref|ZP_06992724.1| rbsC [Escherichia coli FVEC1302]
 gi|300814995|ref|ZP_07095220.1| ribose ABC transporter permease protein [Escherichia coli MS 107-1]
 gi|300824540|ref|ZP_07104650.1| ribose ABC transporter permease protein [Escherichia coli MS 119-7]
 gi|300896081|ref|ZP_07114639.1| ribose ABC transporter permease protein [Escherichia coli MS 198-1]
 gi|300902968|ref|ZP_07120911.1| ribose ABC transporter permease protein [Escherichia coli MS 84-1]
 gi|300916381|ref|ZP_07133121.1| ribose ABC transporter permease protein [Escherichia coli MS 115-1]
 gi|300925580|ref|ZP_07141453.1| ribose ABC transporter permease protein [Escherichia coli MS 182-1]
 gi|300932385|ref|ZP_07147650.1| ribose ABC transporter permease protein [Escherichia coli MS 187-1]
 gi|300934998|ref|ZP_07150041.1| ribose ABC transporter permease protein [Escherichia coli MS 21-1]
 gi|300983881|ref|ZP_07176789.1| ribose ABC transporter permease protein [Escherichia coli MS 200-1]
 gi|300984144|ref|ZP_07176893.1| ribose ABC transporter permease protein [Escherichia coli MS 45-1]
 gi|301020846|ref|ZP_07184907.1| ribose ABC transporter permease protein [Escherichia coli MS 69-1]
 gi|301029074|ref|ZP_07192223.1| ribose ABC transporter permease protein [Escherichia coli MS 196-1]
 gi|301047573|ref|ZP_07194645.1| ribose ABC transporter permease protein [Escherichia coli MS 185-1]
 gi|301305601|ref|ZP_07211691.1| ribose ABC transporter permease protein [Escherichia coli MS 124-1]
 gi|301324949|ref|ZP_07218504.1| ribose ABC transporter permease protein [Escherichia coli MS 78-1]
 gi|301643914|ref|ZP_07243942.1| ribose ABC transporter permease protein [Escherichia coli MS 146-1]
 gi|306815898|ref|ZP_07450036.1| ribose ABC transporter permease protein [Escherichia coli NC101]
 gi|307140450|ref|ZP_07499806.1| ribose ABC transporter permease protein [Escherichia coli H736]
 gi|307313178|ref|ZP_07592803.1| inner-membrane translocator [Escherichia coli W]
 gi|309795693|ref|ZP_07690108.1| ribose ABC transporter permease protein [Escherichia coli MS 145-7]
 gi|312967839|ref|ZP_07782051.1| ribose transport system permease protein rbsC [Escherichia coli
           2362-75]
 gi|312971957|ref|ZP_07786131.1| ribose transport system permease protein rbsC [Escherichia coli
           1827-70]
 gi|331644477|ref|ZP_08345606.1| ribose transport system permease protein RbsC [Escherichia coli
           H736]
 gi|331649576|ref|ZP_08350662.1| ribose transport system permease protein RbsC [Escherichia coli
           M605]
 gi|331655412|ref|ZP_08356411.1| ribose transport system permease protein RbsC [Escherichia coli
           M718]
 gi|331660094|ref|ZP_08361032.1| ribose transport system permease protein RbsC [Escherichia coli
           TA206]
 gi|331665404|ref|ZP_08366305.1| ribose transport system permease protein RbsC [Escherichia coli
           TA143]
 gi|331670601|ref|ZP_08371440.1| ribose transport system permease protein RbsC [Escherichia coli
           TA271]
 gi|331679854|ref|ZP_08380524.1| ribose transport system permease protein RbsC [Escherichia coli
           H591]
 gi|331685477|ref|ZP_08386063.1| ribose transport system permease protein RbsC [Escherichia coli
           H299]
 gi|332282455|ref|ZP_08394868.1| ribose ABC transporter permease [Shigella sp. D9]
 gi|84027831|sp|P0AGI3|RBSC_ECO57 RecName: Full=Ribose transport system permease protein rbsC
 gi|84027832|sp|P0AGI2|RBSC_ECOL6 RecName: Full=Ribose transport system permease protein rbsC
 gi|84027833|sp|P0AGI1|RBSC_ECOLI RecName: Full=Ribose transport system permease protein rbsC
 gi|26110926|gb|AAN83110.1|AE016769_225 Ribose transport system permease protein rbsC [Escherichia coli
           CFT073]
 gi|290600|gb|AAA62103.1| high affinity ribose transport protein [Escherichia coli]
 gi|1790191|gb|AAC76773.1| D-ribose transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|13364167|dbj|BAB38115.1| D-ribose high-affinity transport system permease protein
           [Escherichia coli O157:H7 str. Sakai]
 gi|73857748|gb|AAZ90455.1| D-ribose high-affinity transport system [Shigella sonnei Ss046]
 gi|85676288|dbj|BAE77538.1| D-ribose transporter subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|91074851|gb|ABE09732.1| high-affinity ribose transport system permease protein rbsC
           [Escherichia coli UTI89]
 gi|115515145|gb|ABJ03220.1| ribose ABC transporter permease protein [Escherichia coli APEC O1]
 gi|157068912|gb|ABV08167.1| ribose ABC transporter, permease protein [Escherichia coli HS]
 gi|157077771|gb|ABV17479.1| ribose ABC transporter, permease protein [Escherichia coli E24377A]
 gi|169757141|gb|ACA79840.1| Monosaccharide-transporting ATPase [Escherichia coli ATCC 8739]
 gi|169891085|gb|ACB04792.1| D-ribose transporter subunit; membrane component of ABC superfamily
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170520823|gb|ACB19001.1| ribose ABC transporter, permease protein [Escherichia coli SMS-3-5]
 gi|187766977|gb|EDU30821.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4196]
 gi|188013733|gb|EDU51855.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4113]
 gi|188487562|gb|EDU62665.1| ribose ABC transporter, permease protein [Escherichia coli 53638]
 gi|189001593|gb|EDU70579.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4076]
 gi|189359042|gb|EDU77461.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4401]
 gi|189362580|gb|EDU80999.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4486]
 gi|189373393|gb|EDU91809.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC869]
 gi|189376786|gb|EDU95202.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC508]
 gi|190900763|gb|EDV60556.1| ribose ABC transporter, permease protein [Escherichia coli B7A]
 gi|190909235|gb|EDV68821.1| ribose ABC transporter, permease protein [Escherichia coli F11]
 gi|192930578|gb|EDV83185.1| ribose ABC transporter, permease protein [Escherichia coli E22]
 gi|192955082|gb|EDV85579.1| ribose ABC transporter, permease protein [Escherichia coli E110019]
 gi|194413894|gb|EDX30172.1| ribose ABC transporter, permease protein [Escherichia coli B171]
 gi|194425113|gb|EDX41097.1| ribose ABC transporter, permease protein [Escherichia coli 101-1]
 gi|208729478|gb|EDZ79079.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4206]
 gi|208734612|gb|EDZ83299.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4045]
 gi|208740679|gb|EDZ88361.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4042]
 gi|209158228|gb|ACI35661.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4115]
 gi|209753708|gb|ACI75161.1| D-ribose periplasmic binding protein [Escherichia coli]
 gi|209753710|gb|ACI75162.1| D-ribose periplasmic binding protein [Escherichia coli]
 gi|209753712|gb|ACI75163.1| D-ribose periplasmic binding protein [Escherichia coli]
 gi|209753714|gb|ACI75164.1| D-ribose periplasmic binding protein [Escherichia coli]
 gi|209753716|gb|ACI75165.1| D-ribose periplasmic binding protein [Escherichia coli]
 gi|209914490|dbj|BAG79564.1| ribose ABC transporter permease component [Escherichia coli SE11]
 gi|215267160|emb|CAS11608.1| D-ribose transporter subunit [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217320445|gb|EEC28869.1| ribose ABC transporter, permease protein [Escherichia coli O157:H7
           str. TW14588]
 gi|218354208|emb|CAV00848.1| D-ribose transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli 55989]
 gi|218363090|emb|CAR00728.1| D-ribose transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI1]
 gi|218367594|emb|CAR05378.1| D-ribose transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|218429602|emb|CAR10560.2| D-ribose transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli ED1a]
 gi|218434493|emb|CAR15420.1| D-ribose transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli UMN026]
 gi|222035463|emb|CAP78208.1| ribose transport system permease protein rbsC [Escherichia coli
           LF82]
 gi|226838934|gb|EEH70961.1| ribose transport system permease rbsC [Escherichia sp. 1_1_43]
 gi|226902815|gb|EEH89074.1| ribose transport system permease rbsC [Escherichia sp. 3_2_53FAA]
 gi|227839250|gb|EEJ49716.1| ribose ABC superfamily ATP binding cassette transporter permease
           protein [Escherichia coli 83972]
 gi|238861004|gb|ACR63002.1| D-ribose transporter subunit [Escherichia coli BW2952]
 gi|242379290|emb|CAQ34098.1| rbsC, subunit of ribose ABC transporter [Escherichia coli
           BL21(DE3)]
 gi|253326658|gb|ACT31260.1| inner-membrane translocator [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253975604|gb|ACT41275.1| ribose ABC transporter permease protein [Escherichia coli B str.
           REL606]
 gi|253979760|gb|ACT45430.1| ribose ABC transporter permease protein [Escherichia coli
           BL21(DE3)]
 gi|254595156|gb|ACT74517.1| D-ribose transporter subunit; membrane component of ABC superfamily
           [Escherichia coli O157:H7 str. TW14359]
 gi|257756484|dbj|BAI27986.1| D-ribose high-affinity transport system RbsC [Escherichia coli
           O26:H11 str. 11368]
 gi|257761612|dbj|BAI33109.1| D-ribose high-affinity transport system RbsC [Escherichia coli
           O103:H2 str. 12009]
 gi|257766840|dbj|BAI38335.1| D-ribose high-affinity transport system RbsC [Escherichia coli
           O111:H- str. 11128]
 gi|260451393|gb|ACX41815.1| Monosaccharide-transporting ATPase [Escherichia coli DH1]
 gi|281180808|dbj|BAI57138.1| ribose ABC transporter permease component [Escherichia coli SE15]
 gi|284923864|emb|CBG36963.1| ribose ABC transporter, permease protein [Escherichia coli 042]
 gi|291321708|gb|EFE61144.1| rbsC [Escherichia coli B088]
 gi|291425678|gb|EFE98714.1| rbsC [Escherichia coli FVEC1412]
 gi|291468333|gb|EFF10828.1| conserved hypothetical protein [Escherichia coli B354]
 gi|294491169|gb|ADE89925.1| ribose ABC transporter, permease protein [Escherichia coli IHE3034]
 gi|298276965|gb|EFI18483.1| rbsC [Escherichia coli FVEC1302]
 gi|299877969|gb|EFI86180.1| ribose ABC transporter permease protein [Escherichia coli MS 196-1]
 gi|300300559|gb|EFJ56944.1| ribose ABC transporter permease protein [Escherichia coli MS 185-1]
 gi|300306836|gb|EFJ61356.1| ribose ABC transporter permease protein [Escherichia coli MS 200-1]
 gi|300360024|gb|EFJ75894.1| ribose ABC transporter permease protein [Escherichia coli MS 198-1]
 gi|300398416|gb|EFJ81954.1| ribose ABC transporter permease protein [Escherichia coli MS 69-1]
 gi|300404963|gb|EFJ88501.1| ribose ABC transporter permease protein [Escherichia coli MS 84-1]
 gi|300408420|gb|EFJ91958.1| ribose ABC transporter permease protein [Escherichia coli MS 45-1]
 gi|300416285|gb|EFJ99595.1| ribose ABC transporter permease protein [Escherichia coli MS 115-1]
 gi|300418354|gb|EFK01665.1| ribose ABC transporter permease protein [Escherichia coli MS 182-1]
 gi|300459738|gb|EFK23231.1| ribose ABC transporter permease protein [Escherichia coli MS 21-1]
 gi|300459890|gb|EFK23383.1| ribose ABC transporter permease protein [Escherichia coli MS 187-1]
 gi|300522941|gb|EFK44010.1| ribose ABC transporter permease protein [Escherichia coli MS 119-7]
 gi|300531887|gb|EFK52949.1| ribose ABC transporter permease protein [Escherichia coli MS 107-1]
 gi|300839109|gb|EFK66869.1| ribose ABC transporter permease protein [Escherichia coli MS 124-1]
 gi|300848120|gb|EFK75880.1| ribose ABC transporter permease protein [Escherichia coli MS 78-1]
 gi|301077718|gb|EFK92524.1| ribose ABC transporter permease protein [Escherichia coli MS 146-1]
 gi|305850294|gb|EFM50751.1| ribose ABC transporter permease protein [Escherichia coli NC101]
 gi|306906861|gb|EFN37370.1| inner-membrane translocator [Escherichia coli W]
 gi|307555889|gb|ADN48664.1| high-affinity ribose transport system permease protein RbsC
           [Escherichia coli ABU 83972]
 gi|307628824|gb|ADN73128.1| ribose ABC transporter permease protein [Escherichia coli UM146]
 gi|308120572|gb|EFO57834.1| ribose ABC transporter permease protein [Escherichia coli MS 145-7]
 gi|310334334|gb|EFQ00539.1| ribose transport system permease protein rbsC [Escherichia coli
           1827-70]
 gi|312287400|gb|EFR15308.1| ribose transport system permease protein rbsC [Escherichia coli
           2362-75]
 gi|312948316|gb|ADR29143.1| ribose ABC transporter permease protein [Escherichia coli O83:H1
           str. NRG 857C]
 gi|315138335|dbj|BAJ45494.1| rbsC [Escherichia coli DH1]
 gi|315254557|gb|EFU34525.1| ribose ABC transporter permease protein [Escherichia coli MS 85-1]
 gi|315285533|gb|EFU44975.1| ribose ABC transporter permease protein [Escherichia coli MS 110-3]
 gi|315296853|gb|EFU56142.1| ribose ABC transporter permease protein [Escherichia coli MS 16-3]
 gi|315618541|gb|EFU99127.1| ribose transport system permease protein rbsC [Escherichia coli
           3431]
 gi|320191146|gb|EFW65796.1| Ribose ABC transport system, permease protein RbsC [Escherichia
           coli O157:H7 str. EC1212]
 gi|320193705|gb|EFW68338.1| Ribose ABC transport system, permease protein RbsC [Escherichia
           coli WV_060327]
 gi|320201217|gb|EFW75798.1| Ribose ABC transport system, permease protein RbsC [Escherichia
           coli EC4100B]
 gi|320639478|gb|EFX09093.1| ribose ABC transporter permease protein [Escherichia coli O157:H7
           str. G5101]
 gi|320644918|gb|EFX13954.1| ribose ABC transporter permease protein [Escherichia coli O157:H-
           str. 493-89]
 gi|320650184|gb|EFX18680.1| ribose ABC transporter permease protein [Escherichia coli O157:H-
           str. H 2687]
 gi|320655533|gb|EFX23468.1| ribose ABC transporter permease protein [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
 gi|320661156|gb|EFX28592.1| ribose ABC transporter permease protein [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320666285|gb|EFX33291.1| ribose ABC transporter permease protein [Escherichia coli O157:H7
           str. LSU-61]
 gi|323155431|gb|EFZ41614.1| ribose transport system permease protein rbsC [Escherichia coli
           EPECa14]
 gi|323160998|gb|EFZ46917.1| ribose transport system permease protein rbsC [Escherichia coli
           E128010]
 gi|323166796|gb|EFZ52549.1| ribose transport system permease protein rbsC [Shigella sonnei 53G]
 gi|323173376|gb|EFZ59005.1| ribose transport system permease protein rbsC [Escherichia coli
           LT-68]
 gi|323177770|gb|EFZ63354.1| ribose transport system permease protein rbsC [Escherichia coli
           1180]
 gi|323189517|gb|EFZ74797.1| ribose transport system permease protein rbsC [Escherichia coli
           RN587/1]
 gi|323934899|gb|EGB31277.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli E1520]
 gi|323939187|gb|EGB35400.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli E482]
 gi|323944226|gb|EGB40306.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H120]
 gi|323949993|gb|EGB45877.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H252]
 gi|323955062|gb|EGB50839.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H263]
 gi|323959816|gb|EGB55466.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H489]
 gi|323965818|gb|EGB61269.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli M863]
 gi|323971230|gb|EGB66476.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli TA007]
 gi|323975182|gb|EGB70286.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli TW10509]
 gi|324008000|gb|EGB77219.1| ribose ABC transporter permease protein [Escherichia coli MS 57-2]
 gi|324012785|gb|EGB82004.1| ribose ABC transporter permease protein [Escherichia coli MS 60-1]
 gi|324018452|gb|EGB87671.1| ribose ABC transporter permease protein [Escherichia coli MS 117-3]
 gi|324111649|gb|EGC05630.1| branched-chain amino acid transport system/permease component
           protein [Escherichia fergusonii B253]
 gi|324115894|gb|EGC09820.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli E1167]
 gi|325499556|gb|EGC97415.1| ribose ABC transporter permease protein [Escherichia fergusonii
           ECD227]
 gi|326340502|gb|EGD64301.1| Ribose ABC transport system, permease protein RbsC [Escherichia
           coli O157:H7 str. 1044]
 gi|326341568|gb|EGD65357.1| Ribose ABC transport system, permease protein RbsC [Escherichia
           coli O157:H7 str. 1125]
 gi|327250902|gb|EGE62604.1| ribose transport system permease protein rbsC [Escherichia coli
           STEC_7v]
 gi|330908063|gb|EGH36582.1| ribose ABC transport system, permease protein RbsC [Escherichia
           coli AA86]
 gi|331036771|gb|EGI08997.1| ribose transport system permease protein RbsC [Escherichia coli
           H736]
 gi|331042074|gb|EGI14218.1| ribose transport system permease protein RbsC [Escherichia coli
           M605]
 gi|331047427|gb|EGI19505.1| ribose transport system permease protein RbsC [Escherichia coli
           M718]
 gi|331053309|gb|EGI25342.1| ribose transport system permease protein RbsC [Escherichia coli
           TA206]
 gi|331057914|gb|EGI29900.1| ribose transport system permease protein RbsC [Escherichia coli
           TA143]
 gi|331062663|gb|EGI34583.1| ribose transport system permease protein RbsC [Escherichia coli
           TA271]
 gi|331073026|gb|EGI44351.1| ribose transport system permease protein RbsC [Escherichia coli
           H591]
 gi|331077848|gb|EGI49060.1| ribose transport system permease protein RbsC [Escherichia coli
           H299]
 gi|332104807|gb|EGJ08153.1| ribose ABC transporter permease [Shigella sp. D9]
 gi|332345740|gb|AEE59074.1| ribose transport system permease protein RbsC [Escherichia coli
           UMNK88]
          Length = 321

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 90/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                   Q 
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        +     ++G+ FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A       +   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|293395956|ref|ZP_06640237.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
 gi|291421454|gb|EFE94702.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
          Length = 354

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 86/312 (27%), Gaps = 10/312 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++  L     +    +   +  M   + I  + A G+++V+   G + L+      
Sbjct: 17  FIALLLVVLFFSSMVPNFLTVSNLLIMTQHVAITGLLAVGMTLVI-LTGGIDLSVGAVAG 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +      ++          L   + +      +   +  L      +    +    +   
Sbjct: 76  V----CGMIAGALLTVGVPLWGDNLLFLNVFEVCGVVVLLGLLFGLINGTLITKLGVAPF 131

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I           A +  AD   +        +    F +        +Y  +  M  +  
Sbjct: 132 ICTLGAMYVARGAALLTADGKTYPNLVGMEALGNTGFATLGSGSLFGIYNPIWLMMAVVV 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             I   ++T +      I  N+ A       I+  KL  +A S     + G   A+    
Sbjct: 192 LGIYITKKTPLGRYIYAIGGNEPAARLSGVPIVKVKLFVYAFSGMCAALVGLVIASQLQT 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + V     + GG   +        +++ + +    M    F  ++
Sbjct: 252 AHPMTGNMFEMDAIGATVLGGTALSGGRGRVFGSIIGAFVIVFLADGLVMMGVSEFWQMV 311

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 312 IKGLVIVTAVVI 323


>gi|311694906|gb|ADP97779.1| inner-membrane translocator [marine bacterium HP15]
          Length = 298

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 99/306 (32%), Gaps = 23/306 (7%)

Query: 39  IDSMGIQILIYV----MFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
           + ++ +   +Y     + + GL+++ G + +L+++    YA+GAYS   +   Y  +  +
Sbjct: 4   LLAILVDGSVYASWLFIISAGLTLIYGVMRILNMSHGSFYALGAYSGAAMVGWYFSTGSV 63

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
                  +  A  +      L      L         +   +      I      +    
Sbjct: 64  PWFSFVALIAAALVAGISVGLLVERGLLRFMYGRDEVVMILVTYGVLLIMEDAIKLIWGV 123

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
             YF       L R      SF  Y+   + ++     +  ++   L RT      R + 
Sbjct: 124 EPYFAYQPYTLLGRTKFAGLSFANYD---FMLIGVSILIGLALWYGLNRTRNGKLLRVVI 180

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
            +++   +L   +       F + +    +AGA  A     +          ++  ++V+
Sbjct: 181 HDREIASALGINVARIFTITFLIGAGIGSLAGALTAPGLSVV--PGMGIEVIVLAFAVVV 238

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +GG+ S++       I+         +              +      ++   + LV+  
Sbjct: 239 IGGLGSITGALVGALIVGMSRAAAVHL--------------YPDVELFVIYAVMGLVLAF 284

Query: 335 RSHSLL 340
           R   L 
Sbjct: 285 RPQGLF 290


>gi|259906697|ref|YP_002647053.1| ribose ABC transporter permease protein [Erwinia pyrifoliae Ep1/96]
 gi|224962319|emb|CAX53773.1| Ribose transport permease system protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283476479|emb|CAY72294.1| Ribose transport system permease protein rbsC [Erwinia pyrifoliae
           DSM 12163]
 gi|310765921|gb|ADP10871.1| ribose ABC transporter permease protein [Erwinia sp. Ejp617]
          Length = 322

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 88/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALVLLIAIVSSISPNFFTVGNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L      ++  +     + +G   +   +                     Q 
Sbjct: 82  LTGAVAASLVGLEVNALVAVAASLVLGAGIGAITGLIV---------------AKGNVQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        I     L+ + FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPVNTGFSDNADLFGWFGIGRPLGIPTPVWLMAVVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGISVNRVKIIVYSLCGMLAALAGTIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +   +
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIMGTLIGALILGFLNNGLNLLGVPSYYQTI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|238795154|ref|ZP_04638743.1| Ribose transport system permease protein rbsC [Yersinia intermedia
           ATCC 29909]
 gi|238725512|gb|EEQ17077.1| Ribose transport system permease protein rbsC [Yersinia intermedia
           ATCC 29909]
          Length = 322

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 90/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAVVSSLSPNFFTLNNMFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                + F  
Sbjct: 82  LTGAVAASIVGLEVNALVAVAAALALGAFIGAITGVIVAK------------GKVQAFIA 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T V     +F      +   + +   +  M  +  
Sbjct: 130 TLVMMLLLRGVTMVYTNGSPVNTGFTDVADTFGWFG-----IGRPLGIPTPIWLMAIVFV 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           ++   L  T +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 185 AVWYMLHHTRLGRYIYALGGNESATRLSGISVDKVKIIVYSLCGLLATLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|241258829|ref|YP_002978713.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240863299|gb|ACS60962.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 341

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/332 (13%), Positives = 99/332 (29%), Gaps = 34/332 (10%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K D  L LL VV  +++ +          + +    I ++ + + G + V+   G + 
Sbjct: 1   MVKKDLGLLLLIVVVGIVVAIINPRFLLPINLANTANLIGLFGILSIGQAFVI-ITGGIE 59

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+    +V   +   +S  L +P    +    G + G    +       +   
Sbjct: 60  LSVGSLVALLGVLFVDFIAVQDMSWMLALPFILALGAVIGAVHGWLITRLNLQPFVVTLC 119

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +              T G                      F             +    
Sbjct: 120 GLLIYRGAARFYTADGTAG----------------FAFGQNFPDLEFLTAGRFYGVPNTF 163

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +  ++  + + L R+        I  N++A            +SA+ +      ++  
Sbjct: 164 IALVIIAVVMWIMLHRSVFGRYLYAIGKNEEAARYSGIRTGRMIMSAYVICGLLTALSAI 223

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGM 301
           +FA     ISP        +  I+  +LGG        S+  +   T +L  +  L   +
Sbjct: 224 YFAMYTRSISPASHGQFYELYAIAAAVLGGFSLRGGEGSIVGVVLGTVLLQELQNLVNLL 283

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
                          ++    +  + L  V++
Sbjct: 284 -----------GIPSSLNFAVMGGVILIGVLI 304


>gi|121605607|ref|YP_982936.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120594576|gb|ABM38015.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 283

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 95/307 (30%), Gaps = 28/307 (9%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
            + +  +   + ++   GL+++ G   +++      Y +GAY    + S+   + W+ + 
Sbjct: 5   NLFNGLVYGALLIVMCSGLALIYGLRRVVNFAHGSLYMLGAYLGFTIASQ--SNFWVALV 62

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
               I    G+++     +   D   +  ++++     ++  +     GK+ + VA    
Sbjct: 63  AVPAIMALFGVLLDRYGFRLLQDRDPLTVVLVTFGLLLVIEDFVQTVWGKSNLSVATP-- 120

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                       F           +   V+     ++  + LWL+ + I    R    + 
Sbjct: 121 --------EALNFSVNLFGTAVPAYRIGVIAVGAGVALGLSLWLKYSRIGLFVRASSTDP 172

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                              + +A  G+AG   A                I    +V++GG
Sbjct: 173 TTTAMQGVNTDALSAGVVGLGTALAGLAGVVAAPFLAL--SPSMSSDVLIDSFVVVVIGG 230

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + SLS    A  +L  +  L                         L    +  ++L +  
Sbjct: 231 LGSLSGAFVAALVLGLIQSLGAVY--------------LPNLSAVLPFALMVAILLWKPA 276

Query: 338 SLLRLRT 344
                RT
Sbjct: 277 GFAGSRT 283


>gi|226356448|ref|YP_002786188.1| branched-chain amino acid ABC transporter permease [Deinococcus
           deserti VCD115]
 gi|226318438|gb|ACO46434.1| putative Branched-chain amino acid ABC transporter, permease
           component [Deinococcus deserti VCD115]
          Length = 286

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 93/284 (32%), Gaps = 13/284 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +Q  IY + A GL++ VG +G+++        IGA+      +  G+   L +P+
Sbjct: 8   LLNGLLQSGIYALVASGLALAVGVVGIVNFAHGEFLMIGAFLAWAASAVLGVDPLLSLPL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+   A G +    S++       +  ++++     +L     +  G            
Sbjct: 68  VALSVFAIGALTYRVSIRHVLLAPELNQMLLTFGLGILLQNLALMLLGGN---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              TV +  +        +               + A++   L RT +    R +  N++
Sbjct: 118 -TRTVSTPYQAASLNFGELSVGGPKAIAFGFAVVILAALYFVLYRTTLGRQMRAVAQNRR 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L AF VS     +AG   +                +   +I+++ G+
Sbjct: 177 GAQLIGVDVDKVYLLAFGVSCGLAAIAGVLVSVLLFA--SPTVGLVFALKAFAIIVMAGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            +L+ +  A+ IL     L                         
Sbjct: 235 GNLTGVLWASVILGVSEALVQTYVPGGGGWSDAVFFLMIFGTLV 278


>gi|159185397|ref|NP_355746.2| ABC transporter, membrane spanning protein (ribose) [Agrobacterium
           tumefaciens str. C58]
 gi|159140646|gb|AAK88531.2| ABC transporter, membrane spanning protein (ribose) [Agrobacterium
           tumefaciens str. C58]
          Length = 340

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/320 (15%), Positives = 107/320 (33%), Gaps = 12/320 (3%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K+  +  L A+V          A  +     ++ +Q+    +   G + V+   G + 
Sbjct: 21  IQKFAALGSLFALVAVF--SATSNAFFTVNNGMTIALQVTSIALLGIGATCVI-ITGGID 77

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+      +     G+ + + + +  +    CG+I GL   +F+      ATL
Sbjct: 78  LSVGSVLALAGVVAALAVKELGMPVPIGMLLGILTGSLCGLINGLLVTRFKLPPFI-ATL 136

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            M  I + + ++   IT  +A   + +    LG      I          +    + Y +
Sbjct: 137 GMMLIARGVALQ---ITGARAVSGLGESFGELGNGALFRIVTIGDDGFPNVVFPGIPYPV 193

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + M  ++ ++   L R+ +      +  N  A       +       + +S    G+ G 
Sbjct: 194 ILMVVIALAVSFMLNRSILGRHIYAVGSNADAARLSGVNVARVTNFTYILSGTLAGLTGC 253

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
              +      P+     E   + S VI     +GG+ ++S  A    ++  +        
Sbjct: 254 VLMSRLVTAQPNEGVMYELDAIASAVIGGTSLIGGVGTISGTAIGAFVIGILRNGLNMNG 313

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F   +       +    
Sbjct: 314 VSAFTQQIIIGLVILVTVWI 333


>gi|28211942|ref|NP_782886.1| ribose transport system permease protein rbsC [Clostridium tetani
           E88]
 gi|28204385|gb|AAO36823.1| ribose transport system permease protein rbsC [Clostridium tetani
           E88]
          Length = 316

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/298 (11%), Positives = 84/298 (28%), Gaps = 28/298 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +   I ++  Q+ +  + A G+S V+   G + L+     AI          R   
Sbjct: 35  PRFLNVSNIMNVFTQVSVNAILAIGMSFVI-LTGGIDLSVGSTLAITGALSA-SIIRLTN 92

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           SI+L + V+ +I  A G++ G+   K +     +    M+                  G+
Sbjct: 93  SIFLSLVVALIIGAAIGLMNGVTVAKGKIQAFIVTLATMTVF---------------RGV 137

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +        + +                 +     ++ +      +     +T      
Sbjct: 138 TMVYTNGTPISGLSEKFMVIGNKKILGYIPVPAIITIIILIMAWYVL----SQTRYGRYV 193

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N+ +           K+  + +      ++G    +     SP+       +  I
Sbjct: 194 YALGGNEDSARLSGINTDKVKMLVYVICGMTAALSGVITTSRVGTASPNA-GLGFELDAI 252

Query: 271 SIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + V+LGG        ++        I+  +           +   +       +    
Sbjct: 253 AAVVLGGTSLAGGEGTVVGTIIGAMIIGVLNNGLNLAGVSAYYQSIVKGLVILLAVLI 310


>gi|83950524|ref|ZP_00959257.1| Putative ABC transport system, permease protein [Roseovarius
           nubinhibens ISM]
 gi|83838423|gb|EAP77719.1| Putative ABC transport system, permease protein [Roseovarius
           nubinhibens ISM]
          Length = 287

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 93/306 (30%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +    A   S++ G L   +        +GA++        GL + L    
Sbjct: 6   IFNALVNAALIAPPAMAFSLLFGILKFPNFAIGGYITVGAFAAYTFNVPLGLPLPLAAAA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++     +M +   +   ++ AI  L++S     I+     +            L  
Sbjct: 66  AMLVTALVVWLMHVLVFQPMEEHSAITLLVVSIALTLIIENVIRLFFSADVRGFEIPLER 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + + I   +              +++    +  ++   L  T I  A R + DN  
Sbjct: 126 PWKLLGARITPEQVQ------------IIIWSLVIGVALHCLLAYTWIGRAMRAVADNPM 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                            A+  A  G+ G F       +   +  ++  I + +  ILGG+
Sbjct: 174 LAAIRGVNATRITAFTTAICGALFGLTGVFAGLDL--VIEPLVGWNLTIPIFAAAILGGI 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         ++    E         +   + F             + + +++L+R   
Sbjct: 232 GSPYGAIVGALLVGLAEEATILFLPSTYKIGVGF-------------VIIAVLLLLRPQG 278

Query: 339 LLRLRT 344
           L     
Sbjct: 279 LFGTAE 284


>gi|307262158|ref|ZP_07543809.1| Ribose transport system permease protein rbsC [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306868135|gb|EFM99960.1| Ribose transport system permease protein rbsC [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 319

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 79/312 (25%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +    ++        S   + ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 17  IIALLALIAVVSFLNPNFFSVDNLLNILRQTSVNAIIAIGMTFVILIAG-IDLSVGSVLA 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L         ++  V    +    M   L +                + F  
Sbjct: 76  LTGAVAATLIGLDLSIYLVVPAVLLFGAAIGLMNGVLVA------------FGKVQAFMA 123

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            LI    +            +    +              F +        +L       
Sbjct: 124 TLITMLLLRGVTMIYMEGRPISTGFSDNADYFAEIGTGELFSVPVPVWLMFILFAIGWFI 183

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +T I      +  N+ A       +   KL  FAVS     +AG    +    
Sbjct: 184 L-----TQTRIGRYIYALGGNESATALSGINVNKIKLFVFAVSGVLAALAGLIVTSRLGS 238

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+     +GG   +        I+  +      ++   +  L+
Sbjct: 239 AQPTAGTGYELDAIAAVVVGGTSLMGGKGRIIGTLIGALIIGFLSNALNLLDIDSYYQLV 298

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 299 AKALVILAAVIL 310


>gi|299133677|ref|ZP_07026871.1| inner-membrane translocator [Afipia sp. 1NLS2]
 gi|298591513|gb|EFI51714.1| inner-membrane translocator [Afipia sp. 1NLS2]
          Length = 287

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 95/265 (35%), Gaps = 12/265 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+++ G L +++      Y +GA++   L   +GL+ W  +  
Sbjct: 8   LLVGLINGSFYALLSLGLAVIFGMLEIINFAHGALYMMGAFTAYFLLHYFGLNYWWALLF 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I GA GM++    L++      +  L+++     ++        G +G+  A     
Sbjct: 68  APLIVGAFGMLLERTLLRWLQGLDPLYGLLLTFGLALVIQGIFQNYFGSSGMPYAMPAEL 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G               F+   I+  +V++    +  +    + RT +    R   +N  
Sbjct: 128 RG----------GVNLGFMYLPIYRGWVVVVSLIVCLATWFLIERTRLGAYLRAASENPT 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       + +      +AG   A         +      I+V ++V++GGM
Sbjct: 178 LVRAFGINVPLMITLTYGLGVGLAALAGVLSAPINQV--GPLMGADLIIVVFAVVVIGGM 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNF 303
            S+         L  +  L      
Sbjct: 236 GSIMGSVITGFSLGVIEGLTKYFYP 260


>gi|323526666|ref|YP_004228819.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
 gi|323383668|gb|ADX55759.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
          Length = 341

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 104/320 (32%), Gaps = 20/320 (6%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
              L K      L+ ++          A      I  +     +  + A   + V+   G
Sbjct: 26  PTALQKLLAFTSLILLLVFF--SFASPAFMQMDNILGILQATAVNGVLAIASTFVI-ITG 82

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+        A    +  + + L +WL +  +      CG I G  + K +      
Sbjct: 83  GIDLSVGTLMTFTAVICGVFLTYWHLPMWLGVLAAIGTGAICGTISGTLTAKMKIPPFIA 142

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
              +M  +    L+              AD+  +   T    +        +++  + + 
Sbjct: 143 TLGMMLLLKGLSLV------------VSADKPIYFTDTENFYMISQDSLIGYLLPSLPIP 190

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +L + FL+    L L RTA+      +  N++A       +   K++ + +  A  G+
Sbjct: 191 NAVLILFFLAIVSSLTLNRTALGRYTFALGSNEEAVRLSGVNVDRWKIAIYGLGGAICGV 250

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
           AG   A+  +   P + +  E   + ++VI      GG  ++        I+  +     
Sbjct: 251 AGLLIASRLNSAQPALGQGYELEAIAAVVIGGTSLSGGSGTILGTIIGAFIMSVLTNGLR 310

Query: 300 GMNFYYFNSLLKFDCSFNMR 319
            M+      ++       + 
Sbjct: 311 IMSVAQEWQIVVTGLIIILA 330


>gi|221197676|ref|ZP_03570722.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia multivorans CGD2M]
 gi|221204766|ref|ZP_03577783.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia multivorans CGD2]
 gi|221175623|gb|EEE08053.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia multivorans CGD2]
 gi|221181608|gb|EEE14009.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia multivorans CGD2M]
          Length = 406

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 56/299 (18%), Positives = 101/299 (33%), Gaps = 12/299 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
               +         +       Q  +     Q    V+ A   ++ +G+ GLLS      
Sbjct: 7   FAAFVRWALFAGCLVLPAWLWPQGAVLGYLAQTASLVVLALSYNLQLGTTGLLSFGHAAF 66

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             +GA++     +R+G  + LL  V        G + GL + +  G   A+ TL + E  
Sbjct: 67  AGLGAFAAAHWFNRFGGPLPLLPLVGGAAGAGFGFVAGLLATRRAGTAFAMITLGLGECV 126

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
                       G  G+ +                   +           Y V+   C  
Sbjct: 127 AAAAWSVPAWFGGIGGVPI------------DRASGTPWGGWQFGAPAQAYAVIAAWCIA 174

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           SA  +  L RT ++     +RDN     +L T     +L+    +S F G+AG       
Sbjct: 175 SALAMRALTRTPLARLANAVRDNPARVAALGTDPRRVRLAMVTCASFFAGIAGTLTLIDV 234

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +  +PD    + +  V+   ++GG  +    A   A+L  +  +  GM+  +   L   
Sbjct: 235 EIATPDSVSMARSASVLIAAVIGGSGAFFGPAAGAAVLTALSVVVAGMSRAWALYLGVL 293


>gi|121281861|gb|ABM53494.1| putative inner-membrane translocator LivH [uncultured bacterium
           CBNPD1 BAC clone 67]
          Length = 290

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 84/307 (27%), Gaps = 27/307 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           ++  S      +Y + A G +++  +  +++        +G  + V L            
Sbjct: 6   QFAFSGLTVGAVYALVALGFTLIYNASDVVNFAQGEFVMLGGMATVFLHLAGVPLPLAAA 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +  G    +        RG       +I       +    + I             
Sbjct: 66  LAILITVGVGLALYAFAIDPARGSSAVTIIIITIGASIFLRGVAQVI------------F 113

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +                      VL G   + A I L + RT +  A      N
Sbjct: 114 DKRFHALPHWFGSEPIRLGGAAILPQSLVVLFGAGLIVALIFLVIDRTLLGRAILATAAN 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +      +FA+S+A   +AG         ++         +   +  +LG
Sbjct: 174 RLAARLVGIPVRKIVALSFALSAAIGAVAGILVTP--ITLTSYDVGTLLALKGFAAAMLG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM S         +L        G+    +   + F             + +  V+ +R 
Sbjct: 232 GMGSAVGAVVGGLLLGLAESFGAGLISSKYKDAVAF-------------LIILGVLFVRP 278

Query: 337 HSLLRLR 343
             LL  +
Sbjct: 279 QGLLGKK 285


>gi|254464852|ref|ZP_05078263.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium Y4I]
 gi|206685760|gb|EDZ46242.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium Y4I]
          Length = 343

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/317 (11%), Positives = 92/317 (29%), Gaps = 16/317 (5%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-IL 84
            F             S     ++  + A GL++V G + +++       ++GA+  V +L
Sbjct: 37  FFAIGAPASWLTLTVSGLAMGMMIFIMASGLTLVFGLMDVINFGHGAFVSVGAFVGVSVL 96

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            +    +    + ++              +      +  I    +       ++      
Sbjct: 97  IALGEWTGAASLLLNMFAVFLAVGAAMTVTGALGWGFERIIVKPVYGAHLKQILVTVGGL 156

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                +             R          +    E +    +     L  ++ + LRRT
Sbjct: 157 IVIEQLIHVVWGPDEIFFNRPETLKGAVTFAGAAMEKYRLLAVAVGLALFIAMRMVLRRT 216

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            I    R   +N     +L   +    +  F   SA  G+ G  +   ++ I+  M    
Sbjct: 217 KIGLIVRAGVENGPMVEALGYRLRLVFVGVFIAGSALAGLGGVMWGLYQEVITAGM-GEK 275

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
             ++V  + I+GG+ S+        ++  +      +                       
Sbjct: 276 MMVLVFIVAIIGGLGSVEGAFIGALLVGLMQNYVAFLE--------------PKLALVSN 321

Query: 325 VIALFLVILMRSHSLLR 341
           +  +  +++ R   +L 
Sbjct: 322 IALMTAILMWRPQGMLP 338


>gi|206895336|ref|YP_002247723.1| ribose transport system permease protein RbsC [Coprothermobacter
           proteolyticus DSM 5265]
 gi|206737953|gb|ACI17031.1| ribose transport system permease protein RbsC [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 313

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 92/312 (29%), Gaps = 27/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   ++L +          I ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 19  VIGLLGLCIVLSILSPRFLKWGNILNVLTQTSLNAVMAIGMTFVI-LTGGIDLSVGSILA 77

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                        GL++W+ I +  +I    G++ GL   K           +M+     
Sbjct: 78  FSGMVTA-GMIHSGLNVWIAILIGLVIGTVLGLVNGLSVTKGNVPPFIATLAMMTMARGA 136

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+          G                      F        + +   ++ + F+  
Sbjct: 137 TLVYSSGRPKSNLG--------------------EAFGFLGQGKILSIPVPVIILFFVFI 176

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L +TA          N+KA         + KL  +AVS     + G    +  D 
Sbjct: 177 IAYYVLTQTATGRYIYATGSNEKAAKLSGIKTDYIKLLVYAVSGFTAALTGMVVTSMLDS 236

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            SP     +E   + ++V     + GG   +        I+  +      ++   +   L
Sbjct: 237 ASPTAGTGAELDAIAAVVLGGTSLSGGQGGVVGTIIGALIIGVLNNGLNLLDVSSYYQQL 296

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 297 IKGIVILVAVLI 308


>gi|116251762|ref|YP_767600.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115256410|emb|CAK07492.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 320

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 83/310 (26%), Gaps = 24/310 (7%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++  L   ++     S  Y+           + A G+  V+  LG + L+       GA
Sbjct: 24  IILLLLAGSIYSPNFLSPDYLLQQLKVASFLGVIATGMMAVI-LLGQIDLSVPWVVTTGA 82

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
                  +       L IP       A G++ GL     R          M        +
Sbjct: 83  MMACAATAYGTTGSVLAIPFGIFCGAAIGLVNGLAVAYLRIP-------SMIITLATNAV 135

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +     G    D        + +       P+            +L    +  + +
Sbjct: 136 AQGLMVVYTGGFSPQDSATPAMRFLATGYTIPGLPNG-----------VLVWLCVGLAAV 184

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L RT    +   I + ++A +          L AF +S     + G   A    + S 
Sbjct: 185 FMLTRTTFGRSLYAIGNRERAAYMSGINTRRITLLAFVISGGLSALGGVLLAGYASKASQ 244

Query: 259 DMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
            M        + ++V     +LGG  S         ++  +  +   M        L + 
Sbjct: 245 SMGDAYLLPSIAAVVLGGTHVLGGKGSYLGTVAGVILITLLQSILSVMQIEEAGRQLIYG 304

Query: 314 CSFNMRHTTL 323
                     
Sbjct: 305 AVIIGMLLLY 314


>gi|16762443|ref|NP_458060.1| ribose ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16767167|ref|NP_462782.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29143931|ref|NP_807273.1| ribose ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|161505590|ref|YP_001572702.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|161617006|ref|YP_001590971.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167553995|ref|ZP_02347737.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|167994891|ref|ZP_02575981.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168234395|ref|ZP_02659453.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|168239654|ref|ZP_02664712.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|168245194|ref|ZP_02670126.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|168263217|ref|ZP_02685190.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|168464778|ref|ZP_02698670.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|168823150|ref|ZP_02835150.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|194446074|ref|YP_002043131.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194447978|ref|YP_002047914.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194471527|ref|ZP_03077511.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194735352|ref|YP_002116826.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197250618|ref|YP_002148820.1| ribose ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197262404|ref|ZP_03162478.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197364679|ref|YP_002144316.1| ribose ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198242650|ref|YP_002217831.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200387553|ref|ZP_03214165.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204928743|ref|ZP_03219942.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|205354536|ref|YP_002228337.1| ribose ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207859106|ref|YP_002245757.1| ribose ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213029704|ref|ZP_03344151.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
 gi|213163444|ref|ZP_03349154.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213427453|ref|ZP_03360203.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213613149|ref|ZP_03370975.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213646322|ref|ZP_03376375.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|224585678|ref|YP_002639477.1| ribose ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|25310416|pir||AD0952 high affinity ribose transport protein STY3895 [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16422458|gb|AAL22741.1| D-ribose high-affinity transport protein (1st module, ATP-binding
           subunit) [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|16504748|emb|CAD03112.1| high affinity ribose transport protein [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29139567|gb|AAO71133.1| high affinity ribose transport protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|160866937|gb|ABX23560.1| hypothetical protein SARI_03766 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
 gi|161366370|gb|ABX70138.1| hypothetical protein SPAB_04827 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404737|gb|ACF64959.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194406282|gb|ACF66501.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194457891|gb|EDX46730.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194710854|gb|ACF90075.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|195632290|gb|EDX50774.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|197096156|emb|CAR61752.1| high affinity ribose transport protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197214321|gb|ACH51718.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197240659|gb|EDY23279.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197287678|gb|EDY27069.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|197937166|gb|ACH74499.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|199604651|gb|EDZ03196.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204322176|gb|EDZ07374.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|205274317|emb|CAR39339.1| high affinity ribose transport protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205321703|gb|EDZ09542.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205327330|gb|EDZ14094.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205331684|gb|EDZ18448.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|205336057|gb|EDZ22821.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|205340558|gb|EDZ27322.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|205348223|gb|EDZ34854.1| ribose ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|206710909|emb|CAR35273.1| high affinity ribose transport protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224470206|gb|ACN48036.1| ribose high-affinity ABC transporter permease component [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|261249022|emb|CBG26880.1| high affinity ribose transport protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267996171|gb|ACY91056.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301160415|emb|CBW19941.1| high affinity ribose transport protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312915014|dbj|BAJ38988.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320088308|emb|CBY98069.1| Ribose transport system permease protein rbsC [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321222181|gb|EFX47254.1| Ribose ABC transport system, permease protein RbsC [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|322617204|gb|EFY14109.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619108|gb|EFY15994.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322625175|gb|EFY22003.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322630226|gb|EFY26997.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322634349|gb|EFY31083.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635233|gb|EFY31948.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322642890|gb|EFY39475.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322645095|gb|EFY41625.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650444|gb|EFY46856.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322653635|gb|EFY49962.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322661537|gb|EFY57760.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322661619|gb|EFY57838.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669781|gb|EFY65923.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671974|gb|EFY68093.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675015|gb|EFY71101.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322683705|gb|EFY79718.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686092|gb|EFY82077.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323132245|gb|ADX19675.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323191991|gb|EFZ77228.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323200485|gb|EFZ85563.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202714|gb|EFZ87751.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208291|gb|EFZ93232.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323211727|gb|EFZ96560.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323218588|gb|EGA03295.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323219989|gb|EGA04459.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224760|gb|EGA09025.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323232532|gb|EGA16634.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235307|gb|EGA19392.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323241095|gb|EGA25132.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323241356|gb|EGA25388.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248586|gb|EGA32516.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252115|gb|EGA35975.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258581|gb|EGA42244.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262387|gb|EGA45945.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323268224|gb|EGA51700.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270638|gb|EGA54083.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326629671|gb|EGE36014.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
 gi|332990732|gb|AEF09715.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 321

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 89/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                     
Sbjct: 82  LTGAVAASIVGVEVNALVAVAAALALGAAIGAVTGVIVAKGRVQ--------AFIATLVM 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L+          G         + T        F +        +     ++ + F++A
Sbjct: 134 MLLLRGVTMVYTDG-------SPVNTGFTDNADLFGWFGIGRPLGVPTPVWIMAIVFIAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGISVSKVKIIVYSLCGLTASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|121608340|ref|YP_996147.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121552980|gb|ABM57129.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 290

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 103/312 (33%), Gaps = 26/312 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                   +       ++  + + GL+I +G + +++L       IG Y  +      GL
Sbjct: 4   AFATLLSLVIDGVAYGMMLFLISVGLTITLGVMRVVNLAHSAFAMIGGYLALWSMQHAGL 63

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             ++ +P++ + +   G ++     ++      +  ++M+     ++        G    
Sbjct: 64  GFFVAVPIAVIGTMLIGALLERTLYRWVYATSGLGQMLMTIGLAFVITALFKNLGGTQLQ 123

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            V       G           +    +   ++  +++     +  S+ L L RT+     
Sbjct: 124 SVPIPPSLQG----------NWNVGPLSLSVYRAFLVGASAAVGLSLWLGLERTSFGAKL 173

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   DN +    +   +       FA+      + GA  +          +     + V+
Sbjct: 174 RASVDNPRIARCVGIDVPLVFSVTFAIGCGLAALGGALGSQFLPI--EPYYGLKYLVHVL 231

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            +V +GG+ SL     A  +L  +  L                         ++ +A+  
Sbjct: 232 IVVAVGGLGSLRGSLYAGLLLGVIDTLGRYYVPALGA--------------FVIYLAVLA 277

Query: 331 VILMRSHSLLRL 342
           ++L+R H L+  
Sbjct: 278 ILLIRPHGLVPR 289


>gi|321226614|gb|EFX51664.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
          Length = 275

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/258 (12%), Positives = 73/258 (28%), Gaps = 2/258 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
                    +I+                     +   I  I           +    R  
Sbjct: 72  LVAAGFIGAIIIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGSRDV 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L +            +           + +       ++ +++R + +  A R   ++ 
Sbjct: 132 ALPSLFNGQWIVGSSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKIAKATAILIGVV 295
           + S+        I     
Sbjct: 251 IGSIPGAMIGGLIFGASP 268


>gi|303229934|ref|ZP_07316708.1| Ribose transport system permease protein RbsC [Veillonella atypica
           ACS-134-V-Col7a]
 gi|303230432|ref|ZP_07317193.1| Ribose transport system permease protein RbsC [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302514971|gb|EFL56952.1| Ribose transport system permease protein RbsC [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302515300|gb|EFL57268.1| Ribose transport system permease protein RbsC [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 311

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 88/295 (29%), Gaps = 25/295 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
           +      + ++  Q+ I  + A+G++ V+   G + L+     A+ +          G  
Sbjct: 31  SFLEFSNLRNLLRQVSINAIIAFGMTFVI-LTGGIDLSVGSILALSSAVMA-NLIVTGTD 88

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L I ++A      G I GL     R                   +    I  G   ++
Sbjct: 89  PVLAIVLAAGAGLVLGGINGLVITYGRVAPFIAT------------LATMTIYRGATLVF 136

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                    T       F +   + +       ++          +   L RT++     
Sbjct: 137 TDGNPISGLTQDPLFHGFGQGDIAGLPVPAITMFLAF------IILWFVLSRTSLGRKTY 190

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +  ++K  +     I   K+  +A++    G+AGA   +  +   P      E   + +
Sbjct: 191 AVGGSEKVSYIAGIKIDRVKIFVYALTGMLCGIAGAIITSRLNSAQPTAGAGYELDAIAA 250

Query: 272 IV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
           +V     + GG   +        I+  +      ++   F   +       +   
Sbjct: 251 VVLGGTSLAGGRGHIVGTLIGALIIGTLNNGLNILDVSSFYQQVVKGIVILLAVL 305


>gi|260575941|ref|ZP_05843936.1| Monosaccharide-transporting ATPase [Rhodobacter sp. SW2]
 gi|259021867|gb|EEW25168.1| Monosaccharide-transporting ATPase [Rhodobacter sp. SW2]
          Length = 357

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 94/318 (29%), Gaps = 20/318 (6%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +  ++ +V  ++             + ++  QI I  +     ++VV + G + L+  
Sbjct: 44  SAVPMIVLIVAIIIFGFLSENFFKAGTLSTILQQIAIVGILGCAQTLVVLTAG-IDLSVG 102

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                 +        RYG+   L I +  ++  A G + GL   K +             
Sbjct: 103 AIAVFSSVLMGQATFRYGIPAELSIVIGLILGTAMGAVNGLLIAKMKLPPFIATLGTWQI 162

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +  +  I     T   + I    R                +  S     + + Y +  M 
Sbjct: 163 LLASNFIFSANETIRSSDIEEKARALQF------------WGGSIQPGGVKILYAVFLMI 210

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L A +   LR TA         D+ +A            +  +A++  F  +AG     
Sbjct: 211 VLVAIMSYVLRSTAWGRHVYATGDDPQAAELAGVPTKNVLIQVYALAGFFCAIAGWVMIG 270

Query: 252 SRDRISPD-MFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFY 304
               +SP        NI  I+ V++GG+       S+  +     I+         +   
Sbjct: 271 RFGSVSPTASTGQLGNIQSITAVVIGGISLFGGRGSIVGMFFGALIVGVFEMGLRLVGTD 330

Query: 305 YFNSLLKFDCSFNMRHTT 322
              +              
Sbjct: 331 PQWTFFLIGVLIIFAVAV 348


>gi|172058391|ref|YP_001814851.1| monosaccharide-transporting ATPase [Exiguobacterium sibiricum
           255-15]
 gi|171990912|gb|ACB61834.1| Monosaccharide-transporting ATPase [Exiguobacterium sibiricum
           255-15]
          Length = 322

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 100/306 (32%), Gaps = 25/306 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
                   L++ +      +   + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 25  LAGLFAIILVVSIMEPDFLTLNNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 83

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     L +    +I  ++  + +I GA    +    +        IATL    IF+ 
Sbjct: 84  LSSAFVAGLMTDGTSAILAVL--AGLIVGAIMGALNGMVISLGKVAPFIATLATMTIFRG 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L +   F      Y       ++ M    A
Sbjct: 142 LTL-----------------VYTDGKPITGLSQGGWFELFGRGYFWIFPVPVVTMLIAFA 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A   +   +   K+  +A+S     +AG    +  + 
Sbjct: 185 VLYFILKKTTFGRYTYAIGGNEEAAKLMGIQVNKVKIMIYALSGLMAALAGIILTSRLNS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F  L+
Sbjct: 245 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTLIGALIIGTLNNGLNLLGVSSFFQLV 304

Query: 311 KFDCSF 316
                 
Sbjct: 305 VKGLVI 310


>gi|311108380|ref|YP_003981233.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310763069|gb|ADP18518.1| inner-membrane translocator 54 [Achromobacter xylosoxidans A8]
          Length = 294

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 77/306 (25%), Gaps = 26/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G +++  S   ++        +G        +   L +WL    
Sbjct: 11  LVAGITTGSIYAIVAVGFNVIFKSTDAINFAQGEWVMMGGMVAAACYAVAELPLWLSCLA 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +    G +     +        +   ++S            +  GK  +        
Sbjct: 71  AVALVALAGGLSERLVIHPLKKPAPLLVTLLSIGLAICTKSLVMLGLGKTPMGYPAFSGD 130

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                         P +        ++V+            +  RT +    R    ++ 
Sbjct: 131 APV-----------PLAGAQIPPQSFWVMGVALVFMLGTHFFFERTLLGKTLRATAIDRD 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +  +   AF +++   G+AG   A                    +++     
Sbjct: 180 AAALVGINVRRSVTVAFVLAALAGGIAGVIIAPLTFTSYDHGTMLGFKGFSAAML----- 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                       L  +     G         L      +     L  I L LV+  R   
Sbjct: 235 ----------GGLGSLQGALLGGLLLGVIEALGGGLISSQYKDALSFIVLLLVLFYRPQG 284

Query: 339 LLRLRT 344
           LL    
Sbjct: 285 LLGKAE 290


>gi|304317160|ref|YP_003852305.1| inner-membrane translocator [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778662|gb|ADL69221.1| inner-membrane translocator [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 315

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 83/312 (26%), Gaps = 27/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V   ++  +      +   + ++  Q  +  + A G++ V+   G + L+      
Sbjct: 22  VIGLVALVIVFTILSPRFFNYYNLTNVLRQTSLNAVIAVGMTYVI-LTGGIDLSVGSIL- 79

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             A+S  I       ++ L I +   ++    + M    +  + +               
Sbjct: 80  --AFSSAITCGLLKSNMPLAISIIIGLAVGTLLGMFNGFVTIKWNIPPFIATFAMMTIAR 137

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L                                  F      Y   +   ++    +  
Sbjct: 138 GLT------------------LVYTNGQPITGLNEAFSFIGNGYIGPIPVPIIITILIFI 179

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
               +L+   I         N +A            L  +++S     ++G   A+  + 
Sbjct: 180 IAYYFLKNNKIGRYVYATGGNMQAAKLAGINTNKIILFVYSLSGLLASISGLILASRLNS 239

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            SP      E   + ++V     + GG  SL        I+  +      +N   F   +
Sbjct: 240 ASPTAGNGYELDAIAAVVLGGTSLAGGEGSLIGTLIGAIIIGVLNNGLDLLNVSPFYQSI 299

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 300 AKGIVILLAIAI 311


>gi|206576564|ref|YP_002241269.1| ribose ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288937908|ref|YP_003441967.1| inner-membrane translocator [Klebsiella variicola At-22]
 gi|290511648|ref|ZP_06551016.1| ribose ABC transporter permease [Klebsiella sp. 1_1_55]
 gi|206565622|gb|ACI07398.1| ribose ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288892617|gb|ADC60935.1| inner-membrane translocator [Klebsiella variicola At-22]
 gi|289775438|gb|EFD83438.1| ribose ABC transporter permease [Klebsiella sp. 1_1_55]
          Length = 321

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 90/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAVVSTMSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                   Q 
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        I     ++ + FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPINTGFSDNADLFGWFGIGRPLGIPTPVWIMAIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A      ++   K+  +A+      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGISVNKVKIIVYALCGMLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|188582996|ref|YP_001926441.1| inner-membrane translocator [Methylobacterium populi BJ001]
 gi|179346494|gb|ACB81906.1| inner-membrane translocator [Methylobacterium populi BJ001]
          Length = 291

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/308 (12%), Positives = 83/308 (26%), Gaps = 26/308 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y  S      IY + A G  I+  +   ++        IGA   V+            +
Sbjct: 6   QYTLSGLAIGGIYALVALGFHIMWSAAKAVNFAHGDTLMIGAVLAVMGIDAGLPPPLACL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                 +    ++       F G   +I  ++ +     +      +  G          
Sbjct: 66  LAILAGALFGVVLERFAVRPFIGTNASIGWMLTTIAVGIMAESLATMQFGG--------- 116

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + S                    +        A +    R T +  A + +  N
Sbjct: 117 --FSRPLPSPGVAGAISILGAGVYPQELVIPAVALLAMAGLHAMQRHTLVGRAMQAVAHN 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++A   +   +    + +F +++ F   AG   A                +   ++ I+G
Sbjct: 175 RQAAALMGINVDRIVMFSFGLAALFGAGAGVLVAPVIQA--SASIGVLLGLKGFAVAIIG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+TS   +  A      + +   G                      +   A+ LV++   
Sbjct: 233 GITSGPGVVLAGLAFGVMEKFVEGYVS-------------TAAREIVGFSAMILVLVAFP 279

Query: 337 HSLLRLRT 344
             L   R 
Sbjct: 280 QGLFGRRE 287


>gi|146313744|ref|YP_001178818.1| ribose ABC transporter permease protein [Enterobacter sp. 638]
 gi|145320620|gb|ABP62767.1| ribose ABC transporter membrane protein [Enterobacter sp. 638]
          Length = 321

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 91/312 (29%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAVVSTMSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                   Q 
Sbjct: 82  LTGAVAASIVGIEVNALVAIAAALALGAAIGAVTGMIVAKGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        +     ++G+ FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPVNTGFTDNADLFGWFGIGRPLGVPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGISVNKVKIIVYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|291614043|ref|YP_003524200.1| inner-membrane translocator [Sideroxydans lithotrophicus ES-1]
 gi|291584155|gb|ADE11813.1| inner-membrane translocator [Sideroxydans lithotrophicus ES-1]
          Length = 290

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/284 (10%), Positives = 86/284 (30%), Gaps = 14/284 (4%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  L+Y + A+G  +   +   ++        + A+   +     G+  WL++P   + 
Sbjct: 12  ALMGLVYALIAYGFQLTFATSKSINFGQGELVMLSAFIS-LSIQNLGVPYWLMVPAGLLC 70

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G+++   +++   +  +   ++M+ IF            G+        +      
Sbjct: 71  GVLLGLVVERVAVRLALEQKSEGWILMTIIFGLFAFSAAENIWGRDDKPFPTPISSEPIH 130

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                         +        V +G+  +   I L+ R+T    A+  +  ++ A   
Sbjct: 131 FFG-----------ISVTPVELSVAIGVLSVMGLIELFKRKTLWGKAFEAVSADRDAAEL 179

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +  +     + ++ +S     MAG   +             +  +   ++ ++ G+ S  
Sbjct: 180 MGISARRTIMLSYGLSGLVAAMAGILVSPITTVGPTMAS--ALILKAFAVAVVAGLDSGF 237

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            +      L  +  L        +                   +
Sbjct: 238 GVVLVGLFLGALESLASFYIGSGWREAPGLILLILALAMKPNGV 281


>gi|254450618|ref|ZP_05064055.1| inner-membrane translocator [Octadecabacter antarcticus 238]
 gi|198265024|gb|EDY89294.1| inner-membrane translocator [Octadecabacter antarcticus 238]
          Length = 343

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/342 (12%), Positives = 106/342 (30%), Gaps = 48/342 (14%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS------------------ 80
           I +   +   Y + A GL+I+ G+LG+++      + +GA+                   
Sbjct: 8   ILNGLDKGSAYALIALGLTIIFGTLGVVNFAHGALFMLGAFCAVITSKILSASHKIVDET 67

Query: 81  -------------------YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
                              + +   +  +   + I +   +     +   +     +  Y
Sbjct: 68  RLDFLGNPLEVDTFYVQDWFGMATGQTIMEWSVPIAILFAVPMMILLGFAMERGLIKHFY 127

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                  +   F   L+  + I        +   +    T       F  + +  ++Y  
Sbjct: 128 KRPHADQILVTFGLALVLQEIIKYFFGANPIPTPMPPAFTGSLDFSAFLGYEAQTIMYPY 187

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
           +          + A++  +L+ T      R    +++    L   I       F +++A 
Sbjct: 188 WRLVYFFFSTVIIAAVFAFLQFTTFGMVVRAGMADRETVGLLGIDIDKRFTFMFGLAAAV 247

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AG  +A                ++   +V++GGM SL     A  +L  +       
Sbjct: 248 TGIAGVMYAPIVS--PNYSMGLDFLVLSFVVVVVGGMGSLPGAVAAGFLLGILES----- 300

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
               F S+          +  ++ +   +++L R   L+  +
Sbjct: 301 ----FASMPAVIDVLPGINQIIIYLVAIVILLTRPRGLMGRK 338


>gi|157363935|ref|YP_001470702.1| inner-membrane translocator [Thermotoga lettingae TMO]
 gi|157314539|gb|ABV33638.1| inner-membrane translocator [Thermotoga lettingae TMO]
          Length = 292

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 77/306 (25%), Gaps = 23/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +         Y + A G+ I+  + GL++          AY      +     +W L+  
Sbjct: 6   LILGLSTGSFYSLVALGIVIIYKTTGLMNFAFGNMAMFMAYIAYTFVTIGVGPVWALLFT 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +     +        R         +       I +    I  G        +   
Sbjct: 66  IPVAALFGFAVEKYTLRPIRN--------LSHSSMLIITLGILMILEGLVVQIWGTQYKS 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V       R     V++      V   +  +S +I   L+ T    A + + +N+ 
Sbjct: 118 FPELVTGRPFILRGNFGIVVFRRQDILVFSILIAVSVAIFFILKYTRSGIAIKAVSENEN 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +          ++ + +A   +     A                +   +  +LGG 
Sbjct: 178 VAQLMGINPSRVFSISWMIGTAVGTVVALLGAPKTYV--SPTMMLFYQLQGFTAAVLGGF 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +        L  +     G       +                   +  V+L+R   
Sbjct: 236 DSFAGAILGGLTLGVIETFVGGYISNELKTTFSL-------------ALIIAVLLIRPQG 282

Query: 339 LLRLRT 344
               R 
Sbjct: 283 FFGSRE 288


>gi|86360946|ref|YP_472833.1| sugar ABC transporter permease [Rhizobium etli CFN 42]
 gi|86285048|gb|ABC94106.1| probable D-ribose ABC transporter, permease protein [Rhizobium etli
           CFN 42]
          Length = 341

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 84/302 (27%), Gaps = 23/302 (7%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            +          + +    I ++ + + G + V+   G + L+     A+    +V   +
Sbjct: 20  AIINPRFLLPINLANTANLIGLFGILSMGQAFVI-ITGGIELSVGSLVALLGVLFVDFIA 78

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              +   L +P+  ++    G + G    +       +    +              T G
Sbjct: 79  VQYMPWTLALPLILLLGAVMGAVHGWLITRLNLQPFVVTLCGLLIYRGAARFYTADGTAG 138

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                                 F             +    + M  ++ ++ L L R+  
Sbjct: 139 ----------------FAFGQNFPELEFLTAGRFYGIPSTFIAMVVIAVAMWLVLHRSVF 182

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                 +  N++A            ++A+ +      ++  +FA     ISP        
Sbjct: 183 GRYLYAVGKNEEAARYSGIRTDRLVMTAYVICGLLTALSAIYFAMYTRSISPASHGQFYE 242

Query: 267 IIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           +  I+  +LGG        S+  +   T +L  +  L   +      +         M  
Sbjct: 243 LYAIAAAVLGGFSLRGGEGSIVGVVLGTVLLQELQNLVNLLGIPSSLNFAVMGGVILMGV 302

Query: 321 TT 322
             
Sbjct: 303 LI 304


>gi|328950535|ref|YP_004367870.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
 gi|328450859|gb|AEB11760.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
          Length = 391

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/376 (10%), Positives = 94/376 (25%), Gaps = 58/376 (15%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I+  L + + ++        +  +   +      +Y + A G ++V G + L++     
Sbjct: 22  GIVLALLLAWRVISLENYTLARGVQDFFNALTLGSLYALIALGYTMVYGIIRLINFAHGE 81

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPV---------------------------------- 98
            + +GA+          L   + + V                                  
Sbjct: 82  IFMLGAFFAFYAMLFTPLPWAVALLVTVLVGGVVLGVLRAVLSASSGSRQIILGAVIFIG 141

Query: 99  ----------SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
                       + +    M++   +                     I            
Sbjct: 142 SFLLLTFRAVGWVEALLISMLLTAVAGVLLEAIAYRPLRGAPRESMLITAIAASFFLQNV 201

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL--WLRRTAI 206
           G  +        T   SL +                 +L+         IL  ++ ++ +
Sbjct: 202 GQLIFGPRIQGFTVETSLNQVLTLNIGGDTVYFTGILLLVPAITAVLLFILNRFITQSRL 261

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A R    + +    +   +       F + +     AG  +A    ++ P M      
Sbjct: 262 GKAMRATAQDAEVAQMMGVNVNQIISLTFLIGATLAAAAGVMYALRFGQVHPLM-GLLPG 320

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I   +  ++GG+ SL        +L  +      +                        +
Sbjct: 321 IKAFTAAVIGGIGSLPGAVLGGLVLGFIEIYVVSLFPAL-----------TAYRDVFAFV 369

Query: 327 ALFLVILMRSHSLLRL 342
            L L++L R   L+  
Sbjct: 370 LLILILLFRPSGLIGE 385


>gi|293417223|ref|ZP_06659850.1| rbsC [Escherichia coli B185]
 gi|291431254|gb|EFF04247.1| rbsC [Escherichia coli B185]
          Length = 321

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/312 (8%), Positives = 84/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                     
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGRVQ--------AFIATLVM 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L+          G  V                   F    +   + +   +  M  +  
Sbjct: 134 MLLLRGVTMVYTNGSPVNTGFT---------ENADLFGWFGIGRPLGVPTPVWIMGIVFL 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  + +      +  N+ A       +   K+  +++      +AG    A    
Sbjct: 185 AAWYMLHHSRLGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|158426138|ref|YP_001527430.1| putative branched-chain amino acid transport permease [Azorhizobium
           caulinodans ORS 571]
 gi|158333027|dbj|BAF90512.1| putative branched-chain amino acid transport permease [Azorhizobium
           caulinodans ORS 571]
          Length = 293

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/316 (13%), Positives = 106/316 (33%), Gaps = 28/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L +        +    I    Y + + GL+++ G L +++      Y +GA+   +L +
Sbjct: 4   LLGIAPQALFGQLLLGLINGAFYAILSLGLAVIFGLLNVINFTHGAQYMMGAFGAWMLLN 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+  W  + ++ +   A GM++    L+       +  L+++     I+        G
Sbjct: 64  YVGIPFWGALVLAPIAVAAIGMVIERTLLRRLYHLDHLYGLLLTFGLALIIEGLFRRQYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+   + L                   F+    +  +V++    +       + RT +
Sbjct: 124 SSGLPYNNPLP------------GGTNLGFMFLPNYRAFVVVFSLVICLVTWFVIERTKL 171

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
            +  R   +      +    +       +        +AG   A +           +  
Sbjct: 172 GSYLRAATERPDLVQAFGIDVPRMITLTYGFGVGLAALAGVLAAPAYQV--SPTMGSNLI 229

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+         L  V  L                  +    +T++ +
Sbjct: 230 IVVFAVVVIGGMGSIMGAIVTGFGLGLVEGLTKVF--------------YPEASSTVIFV 275

Query: 327 ALFLVILMRSHSLLRL 342
            + +V+L++   L   
Sbjct: 276 IMAIVLLVKPAGLFGT 291


>gi|118470177|ref|YP_887904.1| ribose/xylose/arabinose/galactoside ABC-type transport systems,
           permeases [Mycobacterium smegmatis str. MC2 155]
 gi|118171464|gb|ABK72360.1| ribose/xylose/arabinose/galactoside ABC-type transport systems,
           permease components [Mycobacterium smegmatis str. MC2
           155]
          Length = 344

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 95/313 (30%), Gaps = 26/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ ++             +   + ++ +    + + A G ++V+   G + L+     
Sbjct: 44  MVIVMLLVIAYFSYRSARFATPDNLVTILVAAAPFALIALGQTLVI-LTGGIDLSVGSVI 102

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +           +WL + VS ++  A G + G    +           I +    
Sbjct: 103 AVSAMAGAATAKANPGQVWLTVLVSMLVGLAVGCVNGFLVSRINVPPF-----IATLGTL 157

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                   +  G A I                     F S      + +   +L M    
Sbjct: 158 TAGSGLAYVIGGGAPINGLPPE---------------FGSIANTKILGLQIPVLLMIIGI 202

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++ + ++RT        +  N+ A             S +A S    G++G   A+   
Sbjct: 203 IALAIIMKRTTYGMRVYAVGGNRHAAEIAGINAKNVLFSVYAFSGLLAGLSGVMLASRVI 262

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P++ +  E   + ++VI     +GG  ++   A    ++  +      +    +   
Sbjct: 263 SGPPNLGQGYELDAIAAVVIGGASLMGGRGTIWGTALGLLMIQTLNNGLDILVVPAYWQD 322

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 323 VIKGVLIVAAVAV 335


>gi|254467188|ref|ZP_05080599.1| inner-membrane translocator [Rhodobacterales bacterium Y4I]
 gi|206688096|gb|EDZ48578.1| inner-membrane translocator [Rhodobacterales bacterium Y4I]
          Length = 440

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 96/274 (35%), Gaps = 21/274 (7%)

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + L  P   +++     ++G  +L  R DYLAIATL ++EI   +L     ++ G   +
Sbjct: 167 PVLLAWPAGGLLAAGAAWLIGKTALGLRSDYLAIATLGIAEIIIAVLKNEDWLSRGVKNV 226

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF---------MYYVLLGMCFLSASIILWL 201
               R       +++   F    +S+ +  +             +   +      +    
Sbjct: 227 VGLPRPLPYEVDLQNDPSFVERAASWGMDPVTASTVYVKAGYALMFTVVLLALLWMAQMA 286

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            ++      R IRDN+ A  ++   +    L  F + SA  G+AGA       +++P  +
Sbjct: 287 LKSPWGRMMRAIRDNETAAEAMGKDVTRRHLQIFVLGSAICGIAGAMMTTLDSQMTPGTY 346

Query: 262 KFS-ENIIVISIVILGGMTSLSKIAKATAILI-----------GVVELCCGMNFYYFNSL 309
                  ++  +VI+GG  +         ++             ++EL            
Sbjct: 347 NPLRFTFLIWVMVIVGGSGNNFGAVLGGMLIWFFWIKVEPMGILLMELVTSGMGEGSALK 406

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                S +      M + L LV+      L+  +
Sbjct: 407 AHLMESASHMRLFTMGLILLLVLRFSPRGLIPEK 440



 Score = 37.2 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 45/115 (39%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +      + +  ++    +  FL  + S      +    LI  + A G++I  G  GL +
Sbjct: 5   MKHTLLFVFVGLMILAEGMTDFLFFSGSWNSALVILNMGLISAIMAIGVNIQWGFAGLFN 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           +  +   A+G  + V++ +    + W    VS +++   G +  + ++       
Sbjct: 65  VGIMGFTALGGLAVVLVSTPVIPAAWSSGGVSIVMALVMGALTVVAAVMITKFMP 119


>gi|220921171|ref|YP_002496472.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219945777|gb|ACL56169.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 290

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/282 (12%), Positives = 85/282 (30%), Gaps = 18/282 (6%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--YVILGSRYGLSIWLLIPVSAMISG 104
           +IY   A+G  +   +   L+     A  +GA     ++  + Y L + L++     +  
Sbjct: 16  MIYAAIAFGYQLTFATSKTLNFGQGEALMLGALFGLTLVPFTGYWLMLPLVLVFGFALGA 75

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
               +   P++K + +Y  I   I   I    + +                         
Sbjct: 76  VVERLGVRPAVKIKSEYGWIMATIALGIIFKNVAENIW--------------GRDDLKFP 121

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           S +         V        ++ G   +  ++ ++ RR+    A     ++  A   + 
Sbjct: 122 SPLPETALTFGGVRVLPMELLIVAGALLMMLAVEVFNRRSIWGKAVVATSNDIDAAGLMG 181

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                    ++++S+     AG   A     ++         +   ++ I+GG+ S   +
Sbjct: 182 INTRKVITLSYSISAMTAAFAGVLVAPV--TLTGATMGSVLALKAFAVAIIGGLESGLGV 239

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
                IL     L        +  +        +     + +
Sbjct: 240 IVGGLILGIAETLTGFYISTGYKDVPGLILLLLVLAVRPVGL 281


>gi|163757583|ref|ZP_02164672.1| ribose ABC transporter, permease protein [Hoeflea phototrophica
           DFL-43]
 gi|162285085|gb|EDQ35367.1| ribose ABC transporter, permease protein [Hoeflea phototrophica
           DFL-43]
          Length = 354

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 78/311 (25%), Gaps = 10/311 (3%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  ++      +      S      +   + I    A G++ V+   G + L+      +
Sbjct: 28  LALLLVFAYFAIMAPNFLSVDNAVLISKHVAINAFLAIGMTFVI-ITGGIDLSVGSVVGL 86

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                  L                 I     +      + +    L     +   I    
Sbjct: 87  TGMVAGYLVLNGIYIGGGYTVYFNTIEIVAIVCCVGIFVGWINGILITRLKVAPFIATLG 146

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            +           + ++D   F             FP         +  ++  +  ++  
Sbjct: 147 TLYVARGV----SLLLSDGRTFPNLNGNPEYGSDTFPMIGSGTVFGLPVMIWALIGVTLL 202

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            I   RRT +         N+++       +   KL  +  S     + G   A+     
Sbjct: 203 AIYISRRTPLGRHIYATGGNERSAALSGVNVDRTKLFVYMFSGLMAAIVGIIIASQLKAS 262

Query: 257 SPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            P   +F E   + + V     + GG   +        ++  + +    M    F  ++ 
Sbjct: 263 HPATGEFFELNAIAAAVLGGTSMAGGRGRIWGTIVGAFVIGILADGLIMMGVSSFWQMVI 322

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 323 KGLVIIAAVVI 333


>gi|258622297|ref|ZP_05717323.1| D-ribose transport system permease protein [Vibrio mimicus VM573]
 gi|258585621|gb|EEW10344.1| D-ribose transport system permease protein [Vibrio mimicus VM573]
          Length = 292

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/304 (9%), Positives = 81/304 (26%), Gaps = 23/304 (7%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           +++        +   I ++  Q  +  + A G+++V+ + G + L+     A+       
Sbjct: 2   VVVSFLNPNFFTVDNILNILRQTSVNAIIAVGMTLVILTAG-IDLSVGSVLALCGAFAAS 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L +     +  +       +    +   + +                + F   L+    +
Sbjct: 61  LIAMEVPVLVAVPTALLAGAALGAISGIIIAK------------GKVQAFIATLVTMTLL 108

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
                       +    T       +F    +  I       V++               
Sbjct: 109 RGVTMVYTDGRPISTGFTDTADTFAWFGTGYALGIPVPVWLMVVVFAGAWYLL-----NH 163

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T        +  N+ A       +   K+  +A+      +AG    +      P     
Sbjct: 164 TRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMG 223

Query: 264 SENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            E   + ++V     ++GG   +        I+  +      ++   +  ++       +
Sbjct: 224 YELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILL 283

Query: 319 RHTT 322
               
Sbjct: 284 AVLV 287


>gi|187476802|ref|YP_784826.1| branched-chain amino acid transport permease [Bordetella avium
           197N]
 gi|115421388|emb|CAJ47893.1| putative branched-chain amino acid transport permease [Bordetella
           avium 197N]
          Length = 329

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 56/330 (16%), Positives = 117/330 (35%), Gaps = 29/330 (8%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            + ++RL     +     +   L +     +  S  +        ++++  A  ++I VG
Sbjct: 17  DMHAIRLRTRIAVTLFAVLAIILAVVPAATSNISFAFYL------MLWITMASAMNICVG 70

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G L    V+ Y +G+Y+  I     G  I   +  +  +  A   ++  P+L+ RG Y
Sbjct: 71  FTGYLPFGYVVFYGVGSYATGICYKILGWPILPSLLAAGGVGVAI-AMLLAPTLRLRGVY 129

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
             I +L ++ I + ++        G +                          S      
Sbjct: 130 FGIVSLALATIVKLVISNLPQSFTGGS---------------------MGIILSNANNPT 168

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             YY +L +   + +++ WL  + +  A + IRD+  A   +   +   +L A+ +++ F
Sbjct: 169 HSYYAMLIVMAATLAVVTWLSVSGLGRALKAIRDDDGAAACVGIHVPNTRLKAWLLAALF 228

Query: 242 IGMAGAFFAASRDRISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             +AG   A   + + P+  F        I   + GG  ++      T  L+G+  +   
Sbjct: 229 PALAGGIEAWYTNVVDPEYAFHVLITAKSIIYAMAGGFGTILGPVVGTLALLGIDHVIWQ 288

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
                   LL       M      ++   L
Sbjct: 289 KFPVVNLLLLGLIIVLLMLFLPRGIVGSLL 318


>gi|324111361|gb|EGC05343.1| branched-chain amino acid transport system/permease component
           protein [Escherichia fergusonii B253]
          Length = 358

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/313 (9%), Positives = 89/313 (28%), Gaps = 10/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  +V   +         S     +M   + I+ + A G+ ++V   G + L+     
Sbjct: 41  AFIALLVIIAVFSSLSLNYFSGANFLTMASHVAIFGLPAIGM-LLVILNGGIDLSVGSTL 99

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       +     +    ++    + + A   +     +      L    +    +  
Sbjct: 100 GLAGVCAGFMMQGINIEALGVVLYLPVWAVAILTLAVGALVGLVNGIL----IAWCRVPA 155

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +             + + + L +   +    +    F          +   +L +  ++
Sbjct: 156 FVATLGSLYVARGIALLITNGLTYNKLSGSESLGNTGFDWLGFNRIFTVPIGVLILGIVA 215

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    L +TA          N++A       +   K+S + +S     MAG   ++   
Sbjct: 216 LACGFLLSKTAFGRWLYASGGNERAAELSGVPVKRVKISVYVLSGICAAMAGLVLSSQLT 275

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG  ++        ++  + +    +    +   
Sbjct: 276 SAGPTAGTTYELTAIAAVVIGGAALTGGRGNVRGTLLGAFVIGFLSDGLVIIGVSAYWQT 335

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 336 VFTGAVIVLAVLL 348


>gi|302552103|ref|ZP_07304445.1| sugar ABC transporter permease [Streptomyces viridochromogenes DSM
           40736]
 gi|302469721|gb|EFL32814.1| sugar ABC transporter permease [Streptomyces viridochromogenes DSM
           40736]
          Length = 337

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 89/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++  +   +      +      +  Q+++    A G ++++ + G + L+C    A
Sbjct: 35  LVALLLACVFFSVSTDQFLTGGNFSLIVQQVMVVGTLAIGQTLIILTAG-IDLSCGAVMA 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            G+     + +   L     I +  ++ G  GM+ G    K           I++    N
Sbjct: 94  FGSIVIAKMAAEGSLPPLAAIALGLVVCGGFGMLNGALVKKIPLPPF-----IVTLGMLN 148

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +      I + +  +                        +F + +  + Y  L    L  
Sbjct: 149 VAFALTHIYSEEQTVSNLPGP------------LTALGQTFPLGKTDITYGSLVTIALFL 196

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L  T        + ++ +A            +  + V+    G+A     +    
Sbjct: 197 LLAYALSSTGWGRHVYALGNSPEAARLNGIRTSRLTIGVYTVAGLLYGVAALLLISRTGV 256

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P   +      + ++V+      GG  S+        I+         M        L
Sbjct: 257 GDPQAGQTDNLDSITAVVLGGTSLFGGRGSVLGTFIGVLIVGVFRNGLQLMGVASIYQTL 316

Query: 311 KFDCSFNMRHTT 322
                  +  T 
Sbjct: 317 ITGVLVILAVTV 328


>gi|53728935|ref|ZP_00134524.2| COG1172: Ribose/xylose/arabinose/galactoside ABC-type transport
           systems, permease components [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126209135|ref|YP_001054360.1| ribose ABC transporter permease protein [Actinobacillus
           pleuropneumoniae L20]
 gi|303249912|ref|ZP_07336114.1| ribose ABC transporter permease protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307246594|ref|ZP_07528665.1| Ribose transport system permease protein rbsC [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307250964|ref|ZP_07532890.1| Ribose transport system permease protein rbsC [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307253336|ref|ZP_07535208.1| Ribose transport system permease protein rbsC [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307255579|ref|ZP_07537384.1| Ribose transport system permease protein rbsC [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307257751|ref|ZP_07539508.1| Ribose transport system permease protein rbsC [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307260030|ref|ZP_07541742.1| Ribose transport system permease protein rbsC [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|126097927|gb|ABN74755.1| ribose transport system permease protein RbsC [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|302650975|gb|EFL81129.1| ribose ABC transporter permease protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306852466|gb|EFM84700.1| Ribose transport system permease protein rbsC [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306856992|gb|EFM89122.1| Ribose transport system permease protein rbsC [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306859200|gb|EFM91241.1| Ribose transport system permease protein rbsC [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306861428|gb|EFM93417.1| Ribose transport system permease protein rbsC [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306863657|gb|EFM95583.1| Ribose transport system permease protein rbsC [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306865866|gb|EFM97742.1| Ribose transport system permease protein rbsC [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 319

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 79/312 (25%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +    ++        S   + ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 17  IIALLALIAVVSFLNPNFFSVDNLLNILRQTSVNAIIAIGMTFVILIAG-IDLSVGSVLA 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L         ++  V    +    +   L +                + F  
Sbjct: 76  LTGAVAATLIGLDLSIYLVVPAVLLFGAAIGLLNGALVA------------FGKVQAFMA 123

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            LI    +            +    +              F +        +L       
Sbjct: 124 TLITMLLLRGVTMIYMEGRPISTGFSDNADYFAEIGTGELFGVPVPVWLMFILFAIGWFI 183

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +T I      +  N+ A       +   KL  FAVS     +AG    +    
Sbjct: 184 L-----TQTRIGRYIYALGGNESATALSGINVNKIKLFVFAVSGVLAALAGLIVTSRLGS 238

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+     +GG   +        I+  +      ++   +  L+
Sbjct: 239 AQPTAGSGYELDAIAAVVVGGTSLMGGKGRIIGTLIGALIIGFLSNALNLLDIDSYYQLV 298

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 299 AKALVILAAVIL 310


>gi|319762266|ref|YP_004126203.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|317116827|gb|ADU99315.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
          Length = 317

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/320 (15%), Positives = 115/320 (35%), Gaps = 27/320 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M + GL+++   +G+L+      Y +GAY          +  W  +  
Sbjct: 10  LLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHTSFYMLGAYFAY--TLSGVIGFWPALVA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ GA G +    +L+    +  +  L+++     ++++   +  G            
Sbjct: 68  APLLIGALGALFERYALRRVHKFGHVPELLVTFGLSYLVLEVVQLVWG---------RST 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + + ++   F      +     +++L    +  S+ L L RT I    +    +  
Sbjct: 119 VPYGLPAQLQGPLFTLYGTQFPKSRSFIMLVAVLMLLSVWLLLTRTRIGLVIQAALKHPH 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    +  F    A  G+AG         ++      S   I+  +V++GGM
Sbjct: 179 MVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NTYVTEPAMAASVGSIIFVVVVVGGM 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT--------------TLM 324
            SL+    A+ ++  V      +++   ++  +       +                 L 
Sbjct: 237 GSLAGAFLASLLIGLVQTFAVALDYSLVHAFARLGVQVTEQTFGYPVLRLTISQVAPILP 296

Query: 325 VIALFLVILMRSHSLLRLRT 344
            + L L+++ R   LL  R 
Sbjct: 297 YLFLVLILIFRPKGLLGTRE 316


>gi|238061207|ref|ZP_04605916.1| ABC branched-chain amino acid transporter permease component
           [Micromonospora sp. ATCC 39149]
 gi|237883018|gb|EEP71846.1| ABC branched-chain amino acid transporter permease component
           [Micromonospora sp. ATCC 39149]
          Length = 296

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 87/279 (31%), Gaps = 6/279 (2%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           Y + A GLS+V G   +L+    +   +GAY           +    +     ++     
Sbjct: 18  YFLVASGLSLVFGLADVLNFAHGLFLGVGAYGTWWAAGNLPGAGPEGLGFVLAVAFGVAA 77

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
              +  L        + +  + ++   + +    +   +A      R +      R +  
Sbjct: 78  GTLVAVLVELVLIRPLYSRTIEQVLVTVGLSLAGVALLQATWGADARPFPRPQWSRGVT- 136

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                            +++    +  +++ +LR T      R   +N++   +L   + 
Sbjct: 137 ----GILGAQVPNGGLLLIVAAAVVLGALLAFLRWTRYGLIIRAGVENREMVTALGIDVR 192

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
            A    FA+  A   +AGA        +SP        I    +V++GGM S+   A A 
Sbjct: 193 KAFTLVFAIGGAAAALAGALGGVYFGTVSPGQGGSLL-IFAFIVVVIGGMGSVIGSAYAA 251

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +  + +            L        +       IA
Sbjct: 252 VAVGLLQQFVNYYGASGVGDLCVVALLAVVLLLRPQGIA 290


>gi|206901397|ref|YP_002251349.1| ribose transport system permease protein RbsC [Dictyoglomus
           thermophilum H-6-12]
 gi|206740500|gb|ACI19558.1| ribose transport system permease protein RbsC [Dictyoglomus
           thermophilum H-6-12]
          Length = 318

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/313 (9%), Positives = 86/313 (27%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L  +V  + + +      +   +  +  QI IY + A G ++++   G + L+     
Sbjct: 19  ILLALIVLCVFITIMNPKFITPFNLQVVARQIAIYGLLAIGETLII-IGGGIDLSVGSLV 77

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      +        I  ++ V  +            +      ++     + +    
Sbjct: 78  ALTGVLVALFMKNGIDMILAILIVLLISCLIGLWHGLFVTKLNVPPFIITLGTLTAARGL 137

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +I          G  +           +  +    FP+             + +   +
Sbjct: 138 ASVI--------TKGWPIIGLPEKFFFIGQGDLWGIPFPT-------------VILIVFA 176

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                  + T +      +  N +A       +   ++  +   S   G+ G   A+   
Sbjct: 177 IIAFFITKYTVLGRNLYAVGGNIEAARLSGIDVDKIRMFTYVFGSFLAGITGIIIASRLS 236

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           +    +    E   + + VI      GG  ++       +I+  +      +    +   
Sbjct: 237 QGQAGVGGGYELSAIAAAVIGGTSLSGGEGTILGTIIGASIMSVIYNGLILLEISSYWHD 296

Query: 310 LKFDCSFNMRHTT 322
           +          T 
Sbjct: 297 VVMGLVIVTAVTI 309


>gi|23100028|ref|NP_693494.1| ribose ABC transporter permease [Oceanobacillus iheyensis HTE831]
 gi|22778259|dbj|BAC14529.1| ribose ABC transporter permease [Oceanobacillus iheyensis HTE831]
          Length = 312

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/327 (13%), Positives = 101/327 (30%), Gaps = 25/327 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+   +       I  +  V+  + + +   A      I ++  QI I  + A+G++ V+
Sbjct: 1   MNNNKMASMWQKVIPLIALVLLIITVTIMNPAFLDPANIMNLLRQISINGLIAFGMTFVI 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
              G + L+     A+ +    I+ +     I  +I    + +    +   L S      
Sbjct: 61  -LTGGIDLSVGSILALSSALAAIMMTSGIDPILAVIIGVLLGAVFGALNGILVSKG--NL 117

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
              I TL    IF+ + + +                   G  +  L   + F      Y 
Sbjct: 118 APFIVTLATMTIFRGLTLVFTD-----------------GKPITGLGDSYAFQLFGKGYF 160

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           + +    + M      +   L + +       I  N+KA       +   K+  +++S  
Sbjct: 161 LGIPVPAVTMIIAFVILWFLLHKMSFGRKTYAIGGNEKAAKISGIKVDRVKIFIYSISGM 220

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVV 295
              +AG    +  +   P      E   + ++V     + GG   ++       I+  + 
Sbjct: 221 MAALAGMILTSRLNSAQPTAGTSYEMDAIAAVVLGGTSLAGGKGRIAGTFIGVLIIGILN 280

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                +    F   +       +    
Sbjct: 281 NGMNLLGISSFYQQVVKGVVILIAVLL 307


>gi|51893333|ref|YP_076024.1| branched-chain amino acid ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
 gi|51857022|dbj|BAD41180.1| branched-chain amino acid ABC transporter permease protein
           [Symbiobacterium thermophilum IAM 14863]
          Length = 286

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 91/302 (30%), Gaps = 28/302 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               +++ + A GLS++ G + +L+      Y +G Y  + L    G     L+  + + 
Sbjct: 12  LTVGMLWFLIASGLSLIFGLMNVLNFAHGGLYMLGTYGALTLYRATGSFPLALVGGALLG 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     I  L      G  L    + +  +                    A         
Sbjct: 72  ALLGAAIELLAIRPLYGRQLFQVLMTLGVMLIF------------DEAVEAIWGPHPLPF 119

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +           + ++  +++     +  ++ L+L RT +    R   +N++   +
Sbjct: 120 QTPALLSGTLQVFDRPFPVYRLFIIAVGLLVYLAVHLFLTRTRLGVIVRAGVENREMVQT 179

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   I       FA+      + GA                   +    +V++GG+ S +
Sbjct: 180 LGVDIRKVFTGVFALGGTLAALGGAVAGPFEGA--HPTLAAENLLPAFIVVVVGGLGSFT 237

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A  ++  +                            + +  + +V+++R   LL  
Sbjct: 238 GSLLAAILVGLLQAFVGFYA--------------PQLALAVNIALMAVVLVLRPQGLLGE 283

Query: 343 RT 344
           + 
Sbjct: 284 QR 285


>gi|318059435|ref|ZP_07978158.1| ABC transporter permease [Streptomyces sp. SA3_actG]
 gi|318077017|ref|ZP_07984349.1| ABC transporter permease [Streptomyces sp. SA3_actF]
          Length = 348

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/326 (14%), Positives = 104/326 (31%), Gaps = 25/326 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + VV  L   L      SQ+ +  + +   I V+ A G ++VV     + L+     
Sbjct: 31  VAAVLVVMLLATQLSHTGFLSQQGVKDLLLNATILVLVATGQAVVV-LTRNVDLSVGSVL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I A++        G S W+ +  +  +    G++ G      +        L+++    
Sbjct: 90  GISAFAAG-DYLHGGGSPWIAVLYAVAVGAVFGLLNGALVSLGKVPA-----LVVTLGTL 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+     +  G   I  AD            +               + Y+ +    + 
Sbjct: 144 YIVRGIDSVWVGSRQIVAADLPDGFVDFGHDGVW-------------AVPYLAVLALAVL 190

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++  WLR          +  + +A       +    L+A+ +     G+AGA + A   
Sbjct: 191 LAVGYWLRHYRGGRELYALGSSPEAATLAGVAVRRRVLTAYVLCGVLAGLAGALYLARFG 250

Query: 255 RI-----SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +     +         ++V  +   GG  ++   A    +L  +  +   +        
Sbjct: 251 NVDSATGNGYELTVVSAVVVGGVAFTGGAGTVYGAALGALLLTSINSVLPALGVSSVWVT 310

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMR 335
                   +      V+AL +  ++R
Sbjct: 311 AINGVLLLLAIAVDRVLALRVAAVLR 336


>gi|294677965|ref|YP_003578580.1| branched-chain amino acid ABC transporter permease LivH
           [Rhodobacter capsulatus SB 1003]
 gi|294476785|gb|ADE86173.1| branched-chain amino acid ABC transporter, permease protein LivH-2
           [Rhodobacter capsulatus SB 1003]
          Length = 289

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 102/305 (33%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +       Y + A GL+++   + +L+      Y IG +    + +++ L   + +  
Sbjct: 5   IVNGLFLGASYALIALGLTLIFSLMNVLNFAHGQMYVIGGFITYTVVAQFHLPFVVGLIC 64

Query: 99  S--AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           S  A+ +    +   L +   R      +T++++      L     +  G+    +   +
Sbjct: 65  SAVALAALGAFVERFLFAPVIRRSKREESTMLLAAGIAFFLDAVTLLVFGEKQRGIPKLV 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
             +                 ++       + +    L  + IL++R++    A R +  +
Sbjct: 125 PGVFNW-----------DFRIVMPYDRILIGVLAVALIGAFILFMRQSRTGRAMRALAQD 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +    +  FA+ +   G+ G    +              +I    ++++G
Sbjct: 174 RMAAELMGVDVARYSMIGFALGAMLAGLVGGLLVSIVGV--NLGMGGPTSIKAFLMIMIG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G   +S       IL  +  +            L    ++      ++  +L + +  R 
Sbjct: 232 GAGVISGAIAGGFILGMLESV-----------GLSLLAAYGDITYLVIFASLMIFLAFRP 280

Query: 337 HSLLR 341
             L+ 
Sbjct: 281 QGLMG 285


>gi|323530233|ref|YP_004232385.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
 gi|323387235|gb|ADX59325.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
          Length = 347

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 96/311 (30%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + ++  +   L      S + +  +  Q  I V+ A G++ V+   G + L+     A  
Sbjct: 48  VLILLCVCFGLATEGFVSVQNLSIVTQQASINVVLAAGMTFVI-LTGGIDLSVGSVLAAA 106

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A + ++  S  G+  WL +P +  +    G+I G      +     +    ++       
Sbjct: 107 AVTALLASSIPGM-GWLGLPAALAVGLGFGLINGFLVSFVKLPPFIVTLGALT------A 159

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++      G        +L               F        + + ++++    +    
Sbjct: 160 VRGIARLIGNDTTIFNPQLP--------------FAFIGNDSLLGVPWLVIIAVSVVMLS 205

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   +L  +A+S    G+      A     +
Sbjct: 206 WFILRRTVLGLRVYSVGGNPEAARLSGIKVWSIELFVYALSGLLAGVGAVMSTARLYAAN 265

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 266 GLQLGQSYELDAIAAVILGGTSFVGGIGSIIGTLVGALIIAVLTNGLVLLGVSDIWQYII 325

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 326 KGLVIIGAVAL 336


>gi|251799294|ref|YP_003014025.1| inner-membrane translocator [Paenibacillus sp. JDR-2]
 gi|247546920|gb|ACT03939.1| inner-membrane translocator [Paenibacillus sp. JDR-2]
          Length = 338

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 95/311 (30%), Gaps = 18/311 (5%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +     +V  L+             I  + +   +  + A G + V+   G + L+    
Sbjct: 30  LAFASLIVLILVFTFSSSNFFQFSNIVGILLSTAVTGVLALGSTFVI-ITGGIDLSVGTV 88

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             + A    +  + +GL + + I    +    CG++ G+   + +               
Sbjct: 89  MTLSAVMTGVFITYWGLPVPIGIVGGILTGAVCGLLSGVMVARLKIPPFIAT-------- 140

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
               +    I  G A +    +  +                  +I    +   ++     
Sbjct: 141 ----LAMMMIAKGLALVISGTKPIYFNDHPVFSEVSQGSFFDKLIPGFAIPNAVVIFFIA 196

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +    + L +T +      +  N++A       + + K+  + ++  F G+AG   A+  
Sbjct: 197 AIIGSILLSKTIVGRYNFALGSNEEATRLSGVNVNYWKIVIYTLTGIFTGLAGILIASRL 256

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +   P +    E   + ++VI      GG  ++        I+  +      ++      
Sbjct: 257 NSAQPALGSGYELEAIAAVVIGGTSLSGGKGTIVGTVIGALIMSVLTNGLRILSVPQEWQ 316

Query: 309 LLKFDCSFNMR 319
            +       + 
Sbjct: 317 TVVVGIVILLA 327


>gi|167568117|ref|ZP_02361033.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Burkholderia oklahomensis EO147]
          Length = 349

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 59/335 (17%), Positives = 120/335 (35%), Gaps = 23/335 (6%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R+  +   L L+A +  L     +    +  Y        L   + A G++++   LGL+
Sbjct: 17  RVRPFGARLPLVATLGTLAAIALVVPAIADAYWIKTLTSALTISIAAAGVALLYRQLGLV 76

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+      +G +   +  +  G+   L +   A+   A GMI GLP+L+ RG YLA+ T
Sbjct: 77  CLSQHALLGVGGWI-ALRLAHLGVPFELCMIAGAVGGSAIGMIAGLPALRLRGLYLALVT 135

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L+M+  FQ ++        G                +    R           +   +  
Sbjct: 136 LMMAGGFQVVVSAIGFPDGGGG----------FTGHLSFGARRMMARPLVGQSDAAYFRY 185

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +     L+ ++I   RR+    +W  IR  +    +    ++  +  AF ++    G++G
Sbjct: 186 VAAWAALAFALIELHRRSKAGRSWALIRRGETTALAAGVNVVLYQTWAFGLAGLLAGLSG 245

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
              A +  ++    F  SE++++ ++ ++GG+           +L  V  L         
Sbjct: 246 GLLAGTVGQLDGRAFAASESVLLFALSVVGGVYHWFGALITGLLLRAVPALLTDFG---- 301

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                               AL   ++     +  
Sbjct: 302 --------VNGYLAMIFFGAALLHALITAPAGIAG 328


>gi|218781508|ref|YP_002432826.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218762892|gb|ACL05358.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 307

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 85/306 (27%), Gaps = 16/306 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL--I 96
           + +       Y + A G S+V G L L +      + +GAY   I+ +            
Sbjct: 8   LVNALQWGSFYALIALGYSMVYGVLMLFNFAHGDVFMVGAYISFIVATTLTALAAAGTIA 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               ++     +   + +         +    + E  +        +        V   +
Sbjct: 68  IPGWVVLLLTIVCAMMLNAIVGVIIERVGYRPLREAPRASAAITGLMIGIILETGVLAIM 127

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   SLI+   +    V        ++L    L  ++  ++++T    A R +  +
Sbjct: 128 GAQRAKFPSLIQSVTYDVGGVFITNKKIMIVLVSIVLMIALDQFVKKTKWGMAMRAMAFD 187

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 +           FA+ S     AG  F  +   + P M             ILG
Sbjct: 188 YTVVPLMGVPANVIAALTFAIGSGLAASAGCLFGVAYPVLDPYM-GIVFGWKAFVAAILG 246

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  S+     A  +L  +      +        + +               + L++  R 
Sbjct: 247 GRGSILGATLAGFLLGFIEIFVALIFPSTMRDFIAYS-------------IILLILTFRP 293

Query: 337 HSLLRL 342
           H     
Sbjct: 294 HGFFGE 299


>gi|308069247|ref|YP_003870852.1| ribose transporter permease rbsC [Paenibacillus polymyxa E681]
 gi|305858526|gb|ADM70314.1| Ribose transport system permease protein rbsC [Paenibacillus
           polymyxa E681]
          Length = 322

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 97/300 (32%), Gaps = 25/300 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +   +      I ++  Q+ I  + A+G++ V+   G + L+     A+ +     +   
Sbjct: 37  VLNPSFLEPLNILNLLRQVSINALIAFGMTFVI-LTGGIDLSVGSILALSSAFVANMMLA 95

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                 L I +   + G  GM+ GL   K +      ATL    IF+ + +         
Sbjct: 96  GFD-PILAIIIGCALGGVMGMVNGLMITKGKMAPFI-ATLATMTIFRGLTL--------- 144

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                   +Y  G  +  L     F      Y+  +    + M    A + + L +T   
Sbjct: 145 --------VYTNGNPITGLGDSLVFQLFGRGYQFGIPVPAITMLITFAVLWIILHKTPFG 196

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                I  N+KA       +   K+  ++++     +AGA   +  +   P      E  
Sbjct: 197 RKTYAIGGNEKASIVSGIKVPRVKIWIYSLAGMLSALAGAILTSRLNSAQPTAGTSYELD 256

Query: 268 IVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V     + GG   +        I+  +      +    F  ++       +    
Sbjct: 257 AIAAVVLGGTSLSGGRGRIVGTLIGVLIIGTLNNGLNLLGVNSFYQMVVKGIVIAIAVLI 316


>gi|319763650|ref|YP_004127587.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|317118211|gb|ADV00700.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
          Length = 291

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 100/306 (32%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL---SIWLL 95
           + +      +Y++F+ GL+I+ G L +++      +  GA    ++           W  
Sbjct: 8   LFTALQISSVYILFSLGLTIIFGVLKVVNFAHGQFFTFGALVLSLVLRALAPSLGHGWAA 67

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
             ++ +   A  +  GL   +F    L    +    +   +++ ++ I     G  V   
Sbjct: 68  YLLAGLAGLAACLFAGLVVYQFGFKRLERDMIGSFILSAGLVLLFEGIMLEVFGGAVRPV 127

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
              L   VR            +        +L     L+A+II+ L+RT    A R +  
Sbjct: 128 PALLEGNVR---------LLGLTVSSQRLVLLAFAVLLTAAIIVLLQRTRFGKALRAVSI 178

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           + +A            L  F +++A   +AG   A            +         V++
Sbjct: 179 DHEAAMLQGVAYRQIALYGFLMATAVAAIAGMLIAPLAAVTPTLGDSYLVKG--FIAVVV 236

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S+      + ++  +             +               + + + +V+L+R
Sbjct: 237 GGMGSIVGAIVGSVLIALLESFVGFYFDPSLAN-------------LAIFVIVMVVLLVR 283

Query: 336 SHSLLR 341
                 
Sbjct: 284 PKGFFG 289


>gi|121604557|ref|YP_981886.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120593526|gb|ABM36965.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 291

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/307 (10%), Positives = 78/307 (25%), Gaps = 26/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      IY + A G +++  + G ++        + A+  +   S     +   +  
Sbjct: 8   LFSGLATGAIYALAALGFTLLWQASGTINFAQGEFVMLPAFMMLGFMSLGAPMLVSFVLT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +     G +     +     Y  +  ++ +      +                     
Sbjct: 68  VLLAILVLGWVFKRGVVDPLFKYGMMPIVVATIGLSIFMRNGVRAGYSAEAHP------- 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 SL     F  + V   +      +    +      +L +T    A + +  N +
Sbjct: 121 ----FPSLFADKLFNIAGVTVTLQDIGTFVLAMAIVMGTQAFLAKTVTGRAMQAVAQNTE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           +   L   +       FA+++     A          ++                I+GG 
Sbjct: 177 SASVLGINVPRMIFYTFAINAVLAVAAALLVTP--TYLAKFDMGEGLGNKAFFAAIIGGF 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +         ++     L        +   +               +   +VIL +   
Sbjct: 235 NNSRGALVGGLLVGVCENLAAAYISPAYKDAVAL-------------VIFMVVILFKPQG 281

Query: 339 LLRLRTP 345
           LL  +  
Sbjct: 282 LLGKKEE 288


>gi|326625618|gb|EGE31963.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 321

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 89/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                     
Sbjct: 82  LTGAVVASIVGVEVNALVAVAAALALGAAIGAVTGVIVAKGRVQ--------AFIATLVM 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L+          G         + T        F +        +     ++ + F++A
Sbjct: 134 MLLLRGVTMVYTDG-------SPVNTGFTDNADLFGWFGIGRPLGVPTPVWIMAIVFIAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGISVSKVKIIVYSLCGLTASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|315292814|gb|EFU52166.1| ribose ABC transporter permease protein [Escherichia coli MS 153-1]
          Length = 321

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 89/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGVTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                     
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGRVQ--------AFIATLVM 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L+          G         + T        F +        +     ++G+ FL+A
Sbjct: 134 MLLLRGVTMVYTNG-------SPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A       +   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|313112592|ref|ZP_07798251.1| amino acid or sugar ABC transport system, permease protein
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310625088|gb|EFQ08384.1| amino acid or sugar ABC transport system, permease protein
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 287

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/281 (11%), Positives = 95/281 (33%), Gaps = 12/281 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    Y +   G +I+ G + +++        +G Y   +L + +G+  ++ +P+
Sbjct: 8   LVNGILLGGFYSLMGMGQNIIFGVMNIVNFCHGEMLMVGMYITYVLYTYFGVDPYVALPI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A++    G ++    +       +   L+   +   +L+    +    +  Y     Y 
Sbjct: 68  VAVLMFGLGALIQSTLITPSLKTKSFTNLLFLTVGLGLLLTNGALVIFGSTYYKIITPYS 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                         P   V   +      L +  ++ ++  +L+ +      R +  N  
Sbjct: 128 QTY----------IPLGPVTIALPRLVSFLILIVVAIALFAFLKYSTTGKQIRAVSQNPI 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    +  + +  A  G+AG+                S     + +V++GG+
Sbjct: 178 GAEVVGINVKKIYILTYGLGVALAGIAGSLLTQFYTI--YPTAGASFGFRALIVVVVGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            S+     A   L  + ++        ++ ++ F     + 
Sbjct: 236 GSIPGAFFAGIFLGLLEQMSALFISPSYSDMIVFVTFIIIL 276


>gi|316935596|ref|YP_004110578.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315603310|gb|ADU45845.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 315

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 49/318 (15%), Positives = 110/318 (34%), Gaps = 26/318 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +  ++  + A GL+++   LG+L+      Y +GA+    +        W  + V+
Sbjct: 10  LNGVLYGMLLFLMASGLTVIFSMLGVLNFAHASFYMLGAFFGYQISR--WTGFWPALIVA 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++GA G  +    L+       +A L+ +      + +   I  G            +
Sbjct: 68  PLLAGAIGAAVERFGLRRVHRNGHVAELLFTFGLAFAIEEVVSIIWG---------KVPV 118

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              V +L+ F  F      Y  +  ++L     +   +++ L++T I    +    +   
Sbjct: 119 DYRVPALLDFPAFTIFSTNYPAYKMFMLAVSIVIFVGLLVVLKKTRIGLIVQAALTHPHM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L   +    +  F V +A   +AG     S   ++          I+  +V++GG+ 
Sbjct: 179 VAHLGHNVERIFMLVFGVGTALAAVAGVIAGPSL--VTQSNMAALLGPILFVVVVVGGLG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT-------------TLMVI 326
           SL     A+ ++  +      +N    +                            +  +
Sbjct: 237 SLPGAFIASLLIGLLQTFAVSVNGSLASVFGPLGPDLAQTWLSDIWNVTIAQIAPIMPYL 296

Query: 327 ALFLVILMRSHSLLRLRT 344
            L L+++ R   LL  R 
Sbjct: 297 LLVLILIFRPMGLLGTRE 314


>gi|311108206|ref|YP_003981059.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310762895|gb|ADP18344.1| inner-membrane translocator 52 [Achromobacter xylosoxidans A8]
          Length = 293

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 98/301 (32%), Gaps = 21/301 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL+++ G +G+++L     Y IGAY    LG      +      +
Sbjct: 11  LNAFQYGLLLFLVASGLTLIFGIMGIINLAHGSFYMIGAYMAFALGPAVDRWLGGGFLAT 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             I       +G         YL           Q +L+ +  I   +    +       
Sbjct: 71  LAICVLAAGALGYLLEAAFFSYLYK-----RNHLQQVLMTYGLILVFEELRSILVGNDVH 125

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G  + + ++        + Y ++  ++      ++  +   + RT +    R    N++ 
Sbjct: 126 GVPLPAWLQGSIALGDVMTYPVYRLFISAVGIAVALLLYWVITRTRLGMMLRAGASNREM 185

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             SL   I       FA   A   +AG+  A                II   +V++GG+ 
Sbjct: 186 IGSLGIDINKLYRLVFAAGVALAALAGSIAAPVSSV--YPGMGNGVLIICFVVVVIGGIG 243

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  ++  V      +              F      L+ + +  ++L +   L
Sbjct: 244 SIRGAFLAAMLVGVVETFGQVL--------------FPSAAGVLVYLLMAFILLCKPEGL 289

Query: 340 L 340
            
Sbjct: 290 F 290


>gi|315647354|ref|ZP_07900467.1| inner-membrane translocator [Paenibacillus vortex V453]
 gi|315277556|gb|EFU40885.1| inner-membrane translocator [Paenibacillus vortex V453]
          Length = 339

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/311 (9%), Positives = 93/311 (29%), Gaps = 7/311 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ ++  + + +      +   +  +  Q    ++ A G + ++   G + L+     
Sbjct: 18  IFVVLILLVIGIAVADPNFLAFSTLRDILQQSSTRLIIALGAAFIL-ITGGVDLSAGRVV 76

Query: 75  AIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            + A     +L +    + +        +     + +    +    +   +A L +    
Sbjct: 77  GLSAVVSASMLQTDVYANRFFPDLPQVWVFMPILIGILAGLIVGLINGFIVAKLHVPPFI 136

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +               +          +R     +            + Y+++   F+
Sbjct: 137 ATLGTMVGIYGINSIYFDMEPNQSQPIGGLRPDFTVWGSGYIDFGGGYSLPYIVIIAVFV 196

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +    +   +T +      I  N +A       +    ++ +A+S A  G+AG   AA  
Sbjct: 197 AFVCWVIFNKTRLGKNMYAIGGNVQAAHVSGINVARNLIAIYAISGALYGIAGVLEAART 256

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              + +     E   + + V+      GG+ ++  +     I   +      +    +  
Sbjct: 257 GGATNNYGNMYELDAIAACVVGGVSTAGGIGTVPGVMAGVLIFGVINYGLTFIGVSPYWQ 316

Query: 309 LLKFDCSFNMR 319
           L+         
Sbjct: 317 LIIKGLIIVAA 327


>gi|261868760|ref|YP_003256682.1| ribose ABC transporter permease [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261414092|gb|ACX83463.1| ribose ABC transporter permease protein [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 298

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/295 (11%), Positives = 83/295 (28%), Gaps = 23/295 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        S   I ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 19  IIALLVLIGVVSAINPDFFSVDNILNILRQTSVNAIIAVGMTFVILIAG-IDLSVGSILA 77

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +       + ++  V  + +   G+   + +                + F  
Sbjct: 78  LTGAFAASMVGAELPVLLVIPLVLLIGTLLGGISGVIVAK------------GKVQAFIA 125

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +       F      FVI        ++ +     
Sbjct: 126 TLVTMTLLRGVAMVYTDGRPISTGFSDTADAFAFLGTGYLFVIPLPIWLMAIVFLVSWYV 185

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                 + T I      +  N+ A       +   K+  FAVS     ++G    +    
Sbjct: 186 L-----KHTKIGRYIYALGGNEAATRLSGINVNKVKIFVFAVSGFLSALSGLIVTSRLSS 240

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
             P      E   + ++V+     +GG   +        I+  +      + F  
Sbjct: 241 AQPTAGVSYELDAIAAVVVGGTSLMGGKGRVMGTLIGALIIGFLNNALNLLIFPL 295


>gi|225574189|ref|ZP_03782799.1| hypothetical protein RUMHYD_02253 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038557|gb|EEG48803.1| hypothetical protein RUMHYD_02253 [Blautia hydrogenotrophica DSM
           10507]
          Length = 350

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/312 (8%), Positives = 84/312 (26%), Gaps = 8/312 (2%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++ +V  +   +      +   + ++   + +Y + A G++ V+   G + L+      
Sbjct: 22  FIVLIVLLIFFSVAADNFLTANALLTVAKHVALYGILAIGMTYVI-ITGGIDLSVGSVVG 80

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L  +        + +   +     +          G    I           
Sbjct: 81  LAGMIAGGLIQQGLTLKMFGVTLYFSVPMVVIIT--AIIGALLGAINGIVITKFKVAPFI 138

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             +    I  G A +      +        L           +    +   ++ +  ++ 
Sbjct: 139 ATLGTMYIWRGFANLRSDGATFSELAGKEGLGNTGFEFFGRNLGGTGIPVGVIILAIIAV 198

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              + L++T       ++  N+KA       +   K+  +  S     + G    +    
Sbjct: 199 IAGILLKKTPFGWHVLSVGGNEKAAGLSGIKVDRVKIWVYTFSGFCSAIVGIIATSQLVS 258

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + V     + GG+ ++        ++  + +         F   +
Sbjct: 259 AHPATGDTWEMNAIAAAVLGGTSMAGGVGNIGGTVVGAFVIGVINDGMTMCGVTEFWQKV 318

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 319 IRGLVIILAVII 330


>gi|90425651|ref|YP_534021.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90107665|gb|ABD89702.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 297

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 102/306 (33%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A    ++  +  +++        IGA+    L ++Y +  +L +P+
Sbjct: 10  LVNGLVVGTLYGVVAMSFVLIYKATQVVNFAQGELLLIGAWVCWTLLTKYQVPFYLGMPI 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G+ + +  L+       I+ ++++     +         G +          
Sbjct: 70  TLAFMFCFGIAVQIVVLRPMIGEPIISVIMVTIALSTVFQAALKWIFGVSPQP------- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +        + +  +      L+    +   +  + + +    A R    NQ+
Sbjct: 123 ----FPRVFESQSVSFAGLQIQTVYVMSLVVSVAMMIGMAWFFKVSKYGLAMRATAFNQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  ++      A+A+S+    +AG   A      S         I V    ILGG+
Sbjct: 179 VAQSLGISVKSVFAMAWAISATVSAVAGVVVAVVNGVSSGLSTY---GIKVFPAAILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +  +   ++  Y +            +       L ++++++ + 
Sbjct: 236 DSIGGAVVGGLIIGLLENVAQYVDSEYLHW--------GNLYEVAPFYVLIIILMIKPYG 287

Query: 339 LLRLRT 344
           L   + 
Sbjct: 288 LFGTKD 293


>gi|199597762|ref|ZP_03211189.1| Ribose/xylose/arabinose/galactoside ABC-type transport system,
           permease component [Lactobacillus rhamnosus HN001]
 gi|229553413|ref|ZP_04442138.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Lactobacillus rhamnosus LMS2-1]
 gi|258538557|ref|YP_003173056.1| ribose ABC transporter permease [Lactobacillus rhamnosus Lc 705]
 gi|199591378|gb|EDY99457.1| Ribose/xylose/arabinose/galactoside ABC-type transport system,
           permease component [Lactobacillus rhamnosus HN001]
 gi|229313294|gb|EEN79267.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Lactobacillus rhamnosus LMS2-1]
 gi|257150233|emb|CAR89205.1| ABC transporter, ribose-transporter permease protein [Lactobacillus
           rhamnosus Lc 705]
          Length = 326

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 86/316 (27%), Gaps = 34/316 (10%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      S   + ++  Q+ I  + A+G++ V+   G + L+     A+       + + 
Sbjct: 37  VMSPTFVSPANLLNLLRQVSINAVIAFGMTFVI-LTGGIDLSVGSILALSGAVTASMLTS 95

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
              +   L     + +    +   L +      Y   A  I +     I      +    
Sbjct: 96  GFAAPLALTVGLILGAVFGLLNGVLIA------YGKAAPFIATLATMTIFRGATYVFTNG 149

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
             I  A                F  P             ++ M  +   + + L +TA  
Sbjct: 150 NPITGAKMNNSFLFQFMGRGYLFGIPFP-----------IIIMIVVYGVLFVLLHKTAFG 198

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N+ A            +  + +S     +AG    +      PD     E  
Sbjct: 199 RKTYALGGNETAARIAGVRTKVVTMLIYTISGLMAAIAGIILTSRLSSAQPDAGTSYEMD 258

Query: 268 IVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V     + GG   +        I+  +      +    F                
Sbjct: 259 AIAAVVLGGTSLAGGKGRIFGTLIGALIIGTLNNGMNLLGISSFYQ-----------QIV 307

Query: 323 LMVIALFLVILMRSHS 338
             ++ L  V+L R   
Sbjct: 308 KGIVILIAVLLDRRSG 323


>gi|188581220|ref|YP_001924665.1| inner-membrane translocator [Methylobacterium populi BJ001]
 gi|179344718|gb|ACB80130.1| inner-membrane translocator [Methylobacterium populi BJ001]
          Length = 289

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 90/304 (29%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      +Y + A G  I     G ++     A  +GA        + G  + L I  
Sbjct: 6   LVSGLGLGSMYGLVALGFHITFAVSGTVNFAQGSAVTLGAVLGYTFAVQLGWPMPLAIAA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G+++    ++      + A L+ +     IL      T G            
Sbjct: 66  ALAGCAGLGLVVERLLVRPFVTRGSDAWLLATVAGGIILDNVLLFTFG-----------K 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              ++ S++                  + +     + +I    R T +      +  N +
Sbjct: 115 EPRSLPSVLVAAPVQVLGAGIYPLQLLIPVVGIAAALAIRAVFRGTELGRVLLAVAQNSE 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +      AFA+S+   G AG   A                I   ++ ILGG+
Sbjct: 175 AARLMGIDVARTVACAFALSAVLAGAAGLLIAPLFSV--SAEMGALFGIKAFAVAILGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S + +  A  +   V                      +     ++   + L + +R + 
Sbjct: 233 GSATGVVLAGLLYGLVEAGVTATLG-------------SGATQIVVFSVIILALALRPNG 279

Query: 339 LLRL 342
           LL  
Sbjct: 280 LLGR 283


>gi|71908384|ref|YP_285971.1| inner-membrane translocator [Dechloromonas aromatica RCB]
 gi|71848005|gb|AAZ47501.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Dechloromonas aromatica RCB]
          Length = 288

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 90/301 (29%), Gaps = 26/301 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL++V G +G+++L     Y IGAY   +L S  G     ++   
Sbjct: 11  LNSLQYGLLLFLVASGLTLVFGIMGIINLAHGSFYMIGAYLAFVLTSTTGSLFMAILLGV 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +       +                 L+   +          +   +        ++  
Sbjct: 71  PLALIFGAFLEWALFSHLYKRDHLEQVLLTYGLILVFEELRSLLVGDEVHGIDIPAMFNG 130

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +             + Y ++   +      L+ ++   ++RT +    R    ++  
Sbjct: 131 SIQLSE----------VLSYPVYRLVISAVCVVLAVALYFVIQRTRLGMMIRAGNHDRTM 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   I       FA+  A   +AG   +                II   IV++GG+ 
Sbjct: 181 VEALGININMIYRVVFALGVALAALAGMLASPISSV--FPNMGSQVLIISFVIVVIGGIG 238

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  I+         +                     ++ I +  V+L R   +
Sbjct: 239 SVWGALAAALIVGFADTFGKVLLPELSG--------------MVVYIVMAGVLLWRPEGI 284

Query: 340 L 340
            
Sbjct: 285 F 285


>gi|322513126|ref|ZP_08066260.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Actinobacillus ureae ATCC 25976]
 gi|322121116|gb|EFX92931.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Actinobacillus ureae ATCC 25976]
          Length = 319

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 95/312 (30%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +    ++        S   + ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 17  IIALLALIAVVSFLNPNFFSVDNLLNILRQTSVNAIIAIGMTFVILIAG-IDLSVGSILA 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   +  +      LSI+L++P   ++  A G++ G      +        + M      
Sbjct: 76  LTG-AVAVTLIGLELSIYLVVPAVLLLGAAIGLLNGALVAFGKVQAFMATLITM------ 128

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G   IY+  R    G +  +               + ++ + +       
Sbjct: 129 ------LLLRGVTMIYMEGRPISTGFSDNADYFAEIGTGELFGVPVPVWLMFILFAIGWF 182

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +     +T I      +  N+ A       +   KL  FAVS     +AG    +    
Sbjct: 183 IL----TQTRIGRYIYALGGNESATALSGINVNKIKLFVFAVSGVLAALAGLIVTSRLGS 238

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+     +GG   +        I+  +      ++   +  L+
Sbjct: 239 AQPTAGTGYELDAIAAVVVGGTSLMGGKGRIIGTLIGALIIGFLSNALNLLDIDSYYQLV 298

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 299 AKALVILAAVIL 310


>gi|298291630|ref|YP_003693569.1| inner-membrane translocator [Starkeya novella DSM 506]
 gi|296928141|gb|ADH88950.1| inner-membrane translocator [Starkeya novella DSM 506]
          Length = 447

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 89/304 (29%), Gaps = 16/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   +Y + A G ++V G  G ++L        G    +I      L   L    
Sbjct: 148 VLGGLVMAGVYGLIAVGFALVHGLFGRINLAFGEIAVAGGTFMLIAVGVASLEGRLGPTA 207

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD--RL 156
             +   A      L S       +       +     ++           G+ +    R+
Sbjct: 208 LTLALLAGIAAAALLSWAIGQAVIMPVATRSTSPQPMLIATIATAIVLAEGLRITSTGRI 267

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
            +L   +   I                +          ++++  +  +    AWR    +
Sbjct: 268 NWLPALLNRPIYIAGKEGFVATATPAQFLAAGLTLSGISALLGLIAFSPFGRAWRAYAQD 327

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 L   +   + + FA++ A  G+AG     +   IS      S  +  +   I+G
Sbjct: 328 PLMAALLGVRVPLLRGATFALAGACAGLAGCAVVIAYGTIS-PGDGLSITLKALISAIIG 386

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+       A++ GV  +                         ++   L   +++R 
Sbjct: 387 GIGSVPGAFLGAALVAGVEIVWSSAFD-------------IAYRDVVIYSLLAAFLVLRP 433

Query: 337 HSLL 340
             +L
Sbjct: 434 GGIL 437


>gi|283787560|ref|YP_003367425.1| ribose ABC transporter permease [Citrobacter rodentium ICC168]
 gi|282951014|emb|CBG90692.1| ribose ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
          Length = 321

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 97/313 (30%), Gaps = 25/313 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  I-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           + GA +  I+G      + +   ++   +      + +   + +     +  +++     
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAVGAVTGVIVAKGRVQAFIATLVMMLLLRGVT 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +     PI  G                       F +        +     ++G+ FL+
Sbjct: 142 MVYTNGSPINTG----------------FTDNADLFGWFGIGRPLGVPTPVWIMGIVFLA 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +L   R  +      +  N+ A      ++   K+  +++      +AG    A   
Sbjct: 186 AWYMLHHTR--LGRYIYALGGNEAATRLSGISVSKIKVIVYSLCGLLASLAGIIEVARLS 243

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++V     + GG   +        IL  +      +    +  +
Sbjct: 244 SAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQM 303

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 304 IVKAVVILLAVLV 316


>gi|115525058|ref|YP_781969.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115519005|gb|ABJ06989.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 291

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 93/265 (35%), Gaps = 12/265 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+++ G L +++      Y +GA+    L + +G+  W  + +
Sbjct: 12  LLVGLINGSFYALLSLGLAVIFGMLNIINFAHGALYMMGAFCAYFLLNVFGIGYWYALIL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I G  G+++    L++      +  L+++     I+        G +G+  A     
Sbjct: 72  APVIVGLFGILLERTMLQWLSGLDHLYGLLLTFGLGLIIQGIFQNYFGSSGLPYAIPAEL 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G               F+   I+  +V++    +       + RT +    R   +N  
Sbjct: 132 QG----------GINLGFMFLPIYRGWVVVFSLVICLLTWYLIERTRLGANLRAATENPT 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       + +      +AG   A         +      I+V ++V++GGM
Sbjct: 182 LVRAFGINVPRMITLTYGLGVGLAALAGVLSAPINQV--RPLMGADLIIVVFAVVVIGGM 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNF 303
            S+         L  V  L      
Sbjct: 240 GSIMGSIITGFALGIVEGLTKYFYP 264


>gi|239905776|ref|YP_002952515.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
 gi|239795640|dbj|BAH74629.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
          Length = 291

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 95/295 (32%), Gaps = 14/295 (4%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
              + +Y+ S   Q   Y +   G +++  + G+++        +G     +     GL 
Sbjct: 2   FAGAPQYLVSGLTQGAAYGLIGLGFTMIFNTTGIINFAQGEFVMLGGMLS-VCLLGVGLP 60

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + L I ++ + + A G +M   +++      AI  +I++     +L     +  GK    
Sbjct: 61  LPLAIVLACLATAAIGGLMERLAIRPIAGAPAINAVIITIGVSILLRGGAMLAFGKDTHA 120

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                      + +        +     +    +VL     L A++ L+   T    A  
Sbjct: 121 -----------LPAFSGTAPILALGAAIQPQSLWVLAVTLALLAALKLFFTATIQGKAML 169

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
                +KA   +  ++    L +FA+S      AGA  A                +   +
Sbjct: 170 ACSCQKKAASLVGISVARMALLSFAISGLIGATAGAILAPITMTA--YDVGMMLGLKGFA 227

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             ILGG+ +    A    +L  +     G     +     F     +       +
Sbjct: 228 ACILGGLGNPFGAAAGGLVLGVLESFGAGFIASGYKDAFAFVVLLLLLFVKPSGL 282


>gi|241204690|ref|YP_002975786.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858580|gb|ACS56247.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 341

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 88/313 (28%), Gaps = 34/313 (10%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            +          + +    I ++ + + G + V+   G + L+     A+    +V   +
Sbjct: 20  AIINPRFLLPINLANTANLIGLFGILSIGQAFVI-ITGGIELSVGSLVALLGVLFVDFIA 78

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              +S  L +P    +    G + G    +       +    +              T G
Sbjct: 79  VQDMSWMLALPFILALGAVIGAVHGWLITRLNLQPFVVTLCGLLIYRGAARFYTADGTAG 138

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                                 F             +    + +  ++  + + L R+  
Sbjct: 139 ----------------FAFGQNFPDLEFLTAGRFYGVPNTFIALVIIAVVMWIMLHRSVF 182

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                 I  N++A            +SA+ +      ++  +FA     ISP        
Sbjct: 183 GRYLYAIGKNEEAARYSGIRTGRMIMSAYVICGLLTALSAIYFAMYTRSISPASHGQFYE 242

Query: 267 IIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           +  I+  +LGG        S+  +   T +L  +  L   +               ++  
Sbjct: 243 LYAIAAAVLGGFSLRGGEGSIVGVVLGTVLLQELQNLVNLL-----------GIPSSLNF 291

Query: 321 TTLMVIALFLVIL 333
             +  + L  V++
Sbjct: 292 AVMGGVILIGVLI 304


>gi|301059321|ref|ZP_07200248.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
 gi|300446550|gb|EFK10388.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
          Length = 291

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 92/294 (31%), Gaps = 26/294 (8%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           Y +    + ++  +  +++        + ++   ++   +GL  ++  P + + +   G 
Sbjct: 18  YALMGLAMVLIYKTSEVVNFAQGEMALVASFLTYMVLEYHGLPFYVAFPSALIFAAFLGF 77

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
            +    L+   +   +  +I++   + IL+       G     +   L            
Sbjct: 78  FLEFAVLRRAKEPNILGMIIITIGLEMILMGIVSWKFGADPKTMPFPLSPYD-------- 129

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                   V          +    +   + L+LR + +  A +  + N  A   +     
Sbjct: 130 --SVEVGEVFVSALEVLTFVVALSVMIILFLFLRYSKLGVAMKATQQNPMAARLMGIRTN 187

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
              +  + +SS    +AG   +            +   +   +  ++GGMTSL       
Sbjct: 188 RILMVTWGISSMVGCLAGLLISPVTM---QPYMMWDPMLKGFAGAVMGGMTSLPGSVFGA 244

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            ++  +  L        F S++ F               + LV+ ++   L   
Sbjct: 245 YLIGIIENLFGLYVSIEFKSVVAF-------------AIIVLVLCIKPSGLFAR 285


>gi|291486163|dbj|BAI87238.1| ribose ABC transporter, permease [Bacillus subtilis subsp. natto
           BEST195]
          Length = 322

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 102/312 (32%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L   +  +++ +   +      I ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 25  FLGLFILVIIVSILNPSFLEPLNILNLLRQVAINGLIAFGMTFVI-LTGGIDLSVGAILA 83

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     +         L I +  +I    GMI GL   K +      ATL    +F+ 
Sbjct: 84  LSSALVAGMIVSGVD-PVLAIILGCIIGAVLGMINGLLITKGKMAPFI-ATLATMTVFRG 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L   + F      Y + +    + M     
Sbjct: 142 LTL-----------------VYTDGNPITGLGTNYAFQMFGCGYFLGIPVPAITMVLAFV 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + + L +T        I  N+KA       +   K+  ++++     +AGA   +    
Sbjct: 185 ILWVLLHKTPFGRRTYAIGGNEKAALISGIKVTRVKVMIYSLAGLLSALAGAILTSRLHS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P   +  E   + ++V     + GG   +        I+  +      +    F  L+
Sbjct: 245 AQPTAGESYELDAIAAVVLGGTSLSGGRGRIVGTLIGVLIIGTLNNGLNLLGVSSFYQLV 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKGIVILIAVLL 316


>gi|190151000|ref|YP_001969525.1| ribose transporter permease RbsC [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307264357|ref|ZP_07545945.1| Ribose transport system permease protein rbsC [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189916131|gb|ACE62383.1| ribose transport system permease protein RbsC [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306870309|gb|EFN02065.1| Ribose transport system permease protein rbsC [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 319

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 94/312 (30%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +    ++        S   + ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 17  IIALLALIAVVSFLNPNFFSVDNLLNILRQTSVNAIIAIGMTFVILIAG-IDLSVGSVLA 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   +         LSI+L++P   +   A G++ G+     +        + M      
Sbjct: 76  LTG-AVAATLIGLDLSIYLVVPAVLLFGAAIGLMNGVLVAFGKVQAFMATLITM------ 128

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G   IY+  R    G +  +               + ++ + +       
Sbjct: 129 ------LLLRGVTMIYMEGRPISTGFSDNADYFAEIGTGELFGVPVPVWLMFILFAIGWF 182

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +     +T I      +  N+ A       +   KL  FAVS     +AG    +    
Sbjct: 183 IL----TQTRIGRYIYALGGNESATALSGINVNKIKLFVFAVSGVLAALAGLIVTSRLGS 238

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+     +GG   +        I+  +      ++   +  L+
Sbjct: 239 AQPTAGSGYELDAIAAVVVGGTSLMGGKGRIIGTLIGALIIGFLSNALNLLDIDSYYQLV 298

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 299 AKALVILAAVIL 310


>gi|152972659|ref|YP_001337805.1| ribose ABC transporter permease protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238892265|ref|YP_002916999.1| ribose ABC transporter permease protein [Klebsiella pneumoniae
           NTUH-K2044]
 gi|262040342|ref|ZP_06013588.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|330005157|ref|ZP_08305121.1| ribose ABC transporter permease protein [Klebsiella sp. MS 92-3]
 gi|150957508|gb|ABR79538.1| ribose high-affinity ABC transporter permease component [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238544581|dbj|BAH60932.1| D-ribose high-affinity transport system permease component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|259042283|gb|EEW43308.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|328536402|gb|EGF62759.1| ribose ABC transporter permease protein [Klebsiella sp. MS 92-3]
          Length = 321

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 90/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAVVSTMSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                   Q 
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVARGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        I     ++ + FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPINTGFSDNADLFGWFGIGRPLGIPTPVWIMAIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A      ++   K+  +A+      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGISVNKVKIIVYALCGMLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|146340682|ref|YP_001205730.1| putative branched-chain amino acid transport permease
           [Bradyrhizobium sp. ORS278]
 gi|146193488|emb|CAL77504.1| putative ABC transporter, permease protein; putative branched-chain
           amino acid transport permease [Bradyrhizobium sp.
           ORS278]
          Length = 287

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 94/265 (35%), Gaps = 12/265 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+++ G L +++      Y +GA+    L +  G++ W  + +
Sbjct: 8   LLVGLINGSFYALLSLGLAVIFGMLNIINFAHGALYMMGAFCAYFLLNLGGINYWWALLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I GA GM++    L++      +  L+++     I+        G +G+  A     
Sbjct: 68  APIIVGAFGMVLERTLLQWLTGLDHLYGLLLTFGIALIVQGIFQNYFGSSGLPYAIP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                            F+   ++  +V++    +  +    + RT +    R   +N  
Sbjct: 125 -------DQLRGGMNLGFMFLPVYRGWVVVFSLVVCLATWFLIERTRLGAYLRAATENPT 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       + +      +AG   A         +      I+V ++V++GGM
Sbjct: 178 LVRAFGINVPRMITLTYGLGVGLAALAGVLSAPINQV--RPLMGADLIIVVFAVVVIGGM 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNF 303
            S+         L  V  L      
Sbjct: 236 GSIMGSIITGFALGVVEGLTKYFYP 260


>gi|311281685|ref|YP_003943916.1| inner-membrane translocator [Enterobacter cloacae SCF1]
 gi|308750880|gb|ADO50632.1| inner-membrane translocator [Enterobacter cloacae SCF1]
          Length = 321

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 90/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTMSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                   Q 
Sbjct: 82  LTGAVAASIVGVEVNALVAVAAALALGAAIGAVTGVIVAKGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        I     ++ + FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPVNTGFTDNADLFGWFGIGRPLGIPTPVWIMAIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGISVNKVKIIVYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|298292600|ref|YP_003694539.1| inner-membrane translocator [Starkeya novella DSM 506]
 gi|296929111|gb|ADH89920.1| inner-membrane translocator [Starkeya novella DSM 506]
          Length = 305

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 99/313 (31%), Gaps = 31/313 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV---------IAYAIGAYSYVILGSRYG 89
           + +      IY + A G S++ G L ++  +               I A    +  +   
Sbjct: 9   LLNWITLGSIYALIAVGFSLLFGVLNIIHFSHGDVSLLAPFLALSVISAIGSALGDAGSL 68

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
            +  L + V+  I+G  G+++ L  ++      A+  L+ +     +L +          
Sbjct: 69  GTFLLALLVAIAITGVIGVLLDLVVIQRFRQAPAMMALVATVALGIVLRELIRHLF---- 124

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                            +       +     +F   V++       ++   L  T +   
Sbjct: 125 ------PNGSNPHAFPRLVEGNVTLAGFTIPLFSVTVIVVSVLAVCALFFMLNSTRLGLH 178

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            + +  ++ A   +         + F V+SA   + G FF++         F     +I 
Sbjct: 179 IKAVSQDRDAARLMAINPGRIFRATFFVASAIGAVGGLFFSSYAGMA-RFDFSIDVGLIG 237

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            S  ++GG+ S+      + ++ G+  L                 +        + + + 
Sbjct: 238 FSAAVVGGLGSMPGAIIGSLLIAGLDTLVQATVP-----------NGASYRLVFVFLLVI 286

Query: 330 LVILMRSHSLLRL 342
            V++ R   L+  
Sbjct: 287 GVLVFRPSGLMGR 299


>gi|261341593|ref|ZP_05969451.1| hypothetical protein ENTCAN_08055 [Enterobacter cancerogenus ATCC
           35316]
 gi|288315944|gb|EFC54882.1| ribose ABC transporter, permease protein [Enterobacter cancerogenus
           ATCC 35316]
          Length = 321

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 98/313 (31%), Gaps = 25/313 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTMSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  I-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           + GA +  I+G      + +   ++A  +      + +   + +     +  +++     
Sbjct: 82  LTGAIAASIVGIEVNALVAVAAALAAGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVT 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +     P+  G                       F +        I     ++G+ FL+
Sbjct: 142 MVYTNGSPVNTG----------------FTDNADLFGWFGIGRPLGIPTPVWIMGIVFLA 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +L   R  +      +  N+ A      ++   K+  +++      +AG    A   
Sbjct: 186 AWYMLHHTR--LGRYIYALGGNEAATRLSGISVNKVKIIVYSLCGLLASLAGIIEVARLS 243

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++V     + GG   +        IL  +      +    +  +
Sbjct: 244 SAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQM 303

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 304 IVKAVVILLAVLV 316


>gi|170695578|ref|ZP_02886722.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
 gi|170139565|gb|EDT07749.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
          Length = 349

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 91/285 (31%), Gaps = 11/285 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
             V  +   L   A  S   + ++ +Q+          + V+   G + L+     A+  
Sbjct: 39  LAVLVVAFSLTSAAFFSVGNLLTVALQVTSIAYLGVAATCVI-ITGGIDLSVGSVLALAG 97

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
            +  +L          ++    + +    +      +   G    IATL M  + + + +
Sbjct: 98  VAAALLVKAGVPVPVAMLGGMLVGAACGWV--NGICVTRMGLPPFIATLGMMLVARGVAL 155

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +                L        S I    FP +       + Y ++ M  L  ++ 
Sbjct: 156 QITGARPVSGLGDAFGELGNGALFKVSHIGADGFPDT---VFPGIPYPVVIMVVLFVAVS 212

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L RT++      +  N +A       +   KL  + +S    G  G    +      P
Sbjct: 213 ILLSRTSLGRHIYAVGSNAEAARLSGVNVQGVKLFTYVLSGVLAGATGCVLMSRLVTAQP 272

Query: 259 DMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +     E   + S VI     +GG+ ++S  A    ++  +    
Sbjct: 273 NEGVMYELDAIASAVIGGTSLMGGVGTISGTAIGAFVIGVLRNGL 317


>gi|238913136|ref|ZP_04656973.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
          Length = 321

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 89/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                     
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGRVQ--------AFIATLVM 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L+          G         + T        F +        +     ++ + F++A
Sbjct: 134 MLLLRGVTMVYTDG-------SPVNTGFTDNADLFGWFGIGRPLGVPTPVWIMAIVFIAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGISVSKVKIIVYSLCGLTASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|229591415|ref|YP_002873534.1| permease component of ABC transporter protein [Pseudomonas
           fluorescens SBW25]
 gi|229363281|emb|CAY50383.1| permease component of ABC transporter protein [Pseudomonas
           fluorescens SBW25]
          Length = 286

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 108/304 (35%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     +IY + A GL+I+ G L  ++      + +GAY           + WL + +
Sbjct: 9   ILNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYICY-TAVSLTGNFWLALLI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++  A   ++    ++       +  ++++     I+ +   +  G  G  VA     
Sbjct: 68  APLVVAALAWVIERLLIQRIYHLPHMFQILVTLGIALIIQEASVMIWGPVGKSVAVPELL 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                 +Y  +  ++++    +   + L L RT      R   ++ +
Sbjct: 128 RGV----------LVVGDFVYPYYRLFLIVFSGLVGLGLWLLLERTRFGALVRAGSESTE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L T I       FA+  A  G+AG  FA  R              +   +V++GGM
Sbjct: 178 TVSLLGTNIFRLFSMTFALGVALAGVAGVLFAPLRGA--QPFVGPEILGVAFVVVVIGGM 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S S       ++  V  L   +              +    + ++  A+ +VIL+R + 
Sbjct: 236 GSFSGALVGGLLVGVVQSLMTTL--------------WPQGASLMIYGAMAVVILVRPYG 281

Query: 339 LLRL 342
           L   
Sbjct: 282 LFGR 285


>gi|229827265|ref|ZP_04453334.1| hypothetical protein GCWU000182_02651 [Abiotrophia defectiva ATCC
           49176]
 gi|229788883|gb|EEP24997.1| hypothetical protein GCWU000182_02651 [Abiotrophia defectiva ATCC
           49176]
          Length = 336

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 95/312 (30%), Gaps = 27/312 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  +  V+  ++ +      S + + ++  Q+    M + G+++V+   G + L+     
Sbjct: 35  MLGVFCVFFAVMSIVSPNFLSSQNMLNVASQVSANAMLSVGMTLVI-ITGGIDLSVGGIL 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +      IL  +   S+ +       ++  CG+I G+     +     +          
Sbjct: 94  GLSGMIGSILMVQTKNSV-VGFITIMAVALICGLINGILIGYIKMPAFIVTL-------- 144

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                              D +     T     + ++F     +  I MY +L+ + F+ 
Sbjct: 145 ----------GMMNICRSLDYVISDANTQSGFPQSWQFIGKQRVMGIPMYLILMVIVFII 194

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            + IL  ++T           N  A       + +   +A+ V     G+A     +   
Sbjct: 195 FAFIL--QKTKFGRFLYACGSNADAAKLSGINVRWNVCAAYIVCGFMCGIAAWIMTSRMM 252

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P     +E   + + VI      GG  ++        ++  +      +    +   
Sbjct: 253 ACDPTYGSIAEMDAIAAAVIGGTSMSGGKGTIGGTVVGIFLVGFLRNALNLLGINPYWQG 312

Query: 310 LKFDCSFNMRHT 321
                   +   
Sbjct: 313 SALGAVIVVAVL 324


>gi|308175331|ref|YP_003922036.1| ribose ABC transporter permease [Bacillus amyloliquefaciens DSM 7]
 gi|307608195|emb|CBI44566.1| ribose ABC transporter (permease) [Bacillus amyloliquefaciens DSM
           7]
 gi|328913667|gb|AEB65263.1| ribose ABC transporter (permease) [Bacillus amyloliquefaciens LL3]
          Length = 323

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/300 (14%), Positives = 98/300 (32%), Gaps = 25/300 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +   +      I ++  Q+ I  + A+G++ V+   G + L+     A+ +     +   
Sbjct: 38  VLNPSFLEPLNILNLLRQVAINALIAFGMTFVI-LTGGIDLSVGAILALSSALVAGMMVS 96

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
               I  +I   A+ +    +   L +         IATL    +F+ + +         
Sbjct: 97  GIDPILAVILGCAIGAVLGMINGFLITKG--KMAPFIATLATMTVFRGLTL--------- 145

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                   +Y  G  +  L   + F      Y + +    + M    A++ + L +T   
Sbjct: 146 --------VYTDGNPITGLGTNYAFQLFGRGYFLGIPVPAITMLIAFAALWILLHKTPFG 197

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                I  N+KA       +   K+  ++++     +AGA   +  +   P   +  E  
Sbjct: 198 RRTYAIGGNEKAALISGIKVPRIKIMIYSLTGLLSALAGAILTSRLNSAQPTAGESYELD 257

Query: 268 IVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V     + GG   +        I+  +      +    F  L+       +    
Sbjct: 258 AIAAVVLGGTSLSGGRGRIIGTLIGVLIIGTLNNGLNLLGVSSFYQLVVKGIVILIAVLL 317


>gi|297199474|ref|ZP_06916871.1| urea ABC transporter, permease UrtB [Streptomyces sviceus ATCC
           29083]
 gi|197712983|gb|EDY57017.1| urea ABC transporter, permease UrtB [Streptomyces sviceus ATCC
           29083]
          Length = 294

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/294 (12%), Positives = 87/294 (29%), Gaps = 29/294 (9%)

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLIPVSAMISGACGMIMGLP 113
           ++  G +G++++        GAY+  +     S  G+S+ + +P++ +++GA G ++   
Sbjct: 26  TLTFGQMGVINMAHGEFIMAGAYTTYVLQKSISSAGISLLVALPLAFLVAGAMGALLEWL 85

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
            ++          L+   +   +    + +         A  +                 
Sbjct: 86  LIRRLYTRPLDTLLVTWGVSLMLQQLARDVFGAPNVQTAAPDILTGN-----------IS 134

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
           +  V +     ++L         + L LR T +    R +  N+                
Sbjct: 135 AGSVTFANNRLFILGLALLCVLGLTLVLRFTPLGRRIRAVVQNRDLAEVSGIATGQVDRI 194

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            F + S   G+AG                 +  +    +V++GG+  L         L  
Sbjct: 195 TFFIGSGLAGVAGVALTLVGPI--GPTMGTNYIVDAFLVVVVGGIGQLKGAVITAFALGV 252

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
           +  +           ++                     +  R   L  LRT S 
Sbjct: 253 LQSVLEYSTTVSVAKVVVLVAIVA-------------FLQWRPQGLYTLRTRSL 293


>gi|264679093|ref|YP_003279000.1| UrtA [Comamonas testosteroni CNB-2]
 gi|262209606|gb|ACY33704.1| UrtA [Comamonas testosteroni CNB-2]
          Length = 317

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 52/319 (16%), Positives = 115/319 (36%), Gaps = 27/319 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M + GL+++   +G+L+      Y +GAY          +  W  + +
Sbjct: 10  MLNGVSYGLLLFMLSSGLTLIFSMMGVLNFAHTSFYMLGAYFAY--TLSGIIGFWPALFL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ G  G +    SL+    Y  +  L+++     ++++   +  G+  +  A     
Sbjct: 68  CPVLVGVLGALFERYSLRRVHKYGHVPELLVTFGLSYLILEVVQLVWGRGTVPYA----- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + S ++   F      +     +V+L    +  ++ L L RT I    +    N +
Sbjct: 123 ----LPSALQGPLFTLYGTQFPKSRSFVMLVALLMLVAVWLLLTRTRIGLVIQAALKNPE 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    +  F    A  G+AG         ++      S   I+  +V++GGM
Sbjct: 179 MVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NTYVTEPAMAASVGSIIFVVVVVGGM 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFN--------------SLLKFDCSFNMRHTTLM 324
            SL+    A+ ++  V      +++                         + +     L 
Sbjct: 237 GSLAGAFVASLLIGVVQTFAVALDWSLAGLFTSMGHQVNESTFGWPVLRLTLSQVAPILP 296

Query: 325 VIALFLVILMRSHSLLRLR 343
            + L L+++ R   LL  R
Sbjct: 297 YLFLVLILIFRPKGLLGTR 315


>gi|225159234|ref|ZP_03725536.1| UreA ABC transporter, permease protein UrtC [Opitutaceae bacterium
           TAV2]
 gi|224802181|gb|EEG20451.1| UreA ABC transporter, permease protein UrtC [Opitutaceae bacterium
           TAV2]
          Length = 276

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 83/292 (28%), Gaps = 29/292 (9%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
               L +++G LG    +         Y  +        S    + ++  I G    I G
Sbjct: 1   MGIYLILMIGKLGQYKSDLPDFMVFLGYEKLPAHWLPFYSFTFALIMALAIPGLLAWIFG 60

Query: 112 LPSLKFRGD--YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
             + + R    Y +I T  ++     +  +      G  G             +    + 
Sbjct: 61  YLAFRSRMKGVYFSILTQALTYAAALMFFRNDFGFGGNNG-------------LTDFKKI 107

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
             F  +       +Y   +           WL RT      + +RD +            
Sbjct: 108 LGFDINAPATRRGLYIASILTLAGVFYFFRWLTRTKAGQILQAVRDGENRVRFSGYDTAR 167

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
            KL  F +++   G+ GA +      I+P      +++  +  V +GG  +L        
Sbjct: 168 YKLFVFVLAAMTSGLGGALYVGQVGIINPSEMTPDKSLEAVVWVAVGGRGTLLGPIIGAV 227

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            +  +                    +       +M     +V+L+    ++ 
Sbjct: 228 GVNALKSWATR--------------AAPELWLFIMAALFIVVVLLLPGGIVS 265


>gi|22127120|ref|NP_670543.1| sugar transport system permease [Yersinia pestis KIM 10]
 gi|45443292|ref|NP_994831.1| sugar transport system permease [Yersinia pestis biovar Microtus
           str. 91001]
 gi|150260127|ref|ZP_01916855.1| sugar transport system permease [Yersinia pestis CA88-4125]
 gi|218928035|ref|YP_002345910.1| sugar transport system permease [Yersinia pestis CO92]
 gi|21960179|gb|AAM86794.1|AE013926_2 D-ribose high-affinity transport system protein [Yersinia pestis
           KIM 10]
 gi|45438160|gb|AAS63708.1| sugar transport system permease [Yersinia pestis biovar Microtus
           str. 91001]
 gi|115346646|emb|CAL19529.1| sugar transport system permease [Yersinia pestis CO92]
 gi|149289535|gb|EDM39612.1| sugar transport system permease [Yersinia pestis CA88-4125]
          Length = 336

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/323 (13%), Positives = 91/323 (28%), Gaps = 24/323 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLG 64
               + L AV+     F     T S+ Y  S      +  Q+ I  + A G++ V+ + G
Sbjct: 21  ILAFVGLCAVIALAGEFAVNSGTWSENYFLSRDNTLIILRQVSINGILAIGMTFVIITAG 80

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+      +         +              ++     + +GL      G  L  
Sbjct: 81  -VDLSVGAVLGLAGIVAARFATNNSAIALGGTDWPLLVPIVIAIGIGLVCGAINGFILGK 139

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
             L    +   +L   + +T    G     +L      +               Y + + 
Sbjct: 140 YRLQPFIVTMGMLSVARGLTLLTTGGNPVSQLTDEFRWL------------GNGYILGIP 187

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +L    L A     L +         +  N+K+  +    ++  K++ + +      +
Sbjct: 188 VPVLIFIILFAIAWFVLNKMTFGRYVYAVGGNEKSARTSGINVLRIKVAVYTLCGILAAI 247

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
           AG    A             E   + ++VI      GG+ +L        I+  +     
Sbjct: 248 AGLILTARTGSAQTGAGVSYELDAIAAVVIGGTSMAGGIGTLRGTLFGVLIIGVMNNGLD 307

Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322
            +    +   +            
Sbjct: 308 LLGVQSYYQQIIKGVLIVFAVML 330


>gi|323691314|ref|ZP_08105589.1| hypothetical protein HMPREF9475_00451 [Clostridium symbiosum
           WAL-14673]
 gi|323504654|gb|EGB20441.1| hypothetical protein HMPREF9475_00451 [Clostridium symbiosum
           WAL-14673]
          Length = 291

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 96/299 (32%), Gaps = 25/299 (8%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            +Y + A G +++ G + +L +    AY +GAY    +    G      I    +     
Sbjct: 14  SVYALTAMGATLIYGIMRILDIANAGAYVVGAYIGYYIYITTGNLPLAFILSMGLTGTIG 73

Query: 107 GMIMGLPSLKF--RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
            ++          +   L I  LI S     +      +  G         L F    + 
Sbjct: 74  VLVHKCLYGPILAKPHILPIIPLITSVGLFTLTGDLVRLICGAGTKAYNAELGFGAVHLG 133

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           +           ++       +L+    L   +   L +T +  AW+   ++ +   ++ 
Sbjct: 134 NN----------IVIAPEWILILVLTAVLFLILWFILNKTTLGLAWKATAEDPEIARAVG 183

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                A   ++ +   F   AG       + I+      + +  +++I++LGG+ +    
Sbjct: 184 INTNSATALSYIIGYGFAAAAGIMVGILYNSIT-PALGETPSYKMLAIIVLGGLGNPVGT 242

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
             A   +     L       +                 +  I L L++L++   L+  +
Sbjct: 243 VIAGLFVGLSETLISVYIGSFIPKDS------------IAFIVLVLILLIKPSGLVSKK 289


>gi|329903348|ref|ZP_08273441.1| inner-membrane translocator [Oxalobacteraceae bacterium IMCC9480]
 gi|327548426|gb|EGF33104.1| inner-membrane translocator [Oxalobacteraceae bacterium IMCC9480]
          Length = 296

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 84/282 (29%), Gaps = 8/282 (2%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
             +IY + A+G  +   + G L+     A  +GA   + L        +L   +   +  
Sbjct: 14  LGMIYAVIAFGYQLTFATSGTLNFGQGEALMLGALVGLSLVGNIHGGPYLNYWLMIPVVI 73

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
             G + G+                   I   I +        +      D          
Sbjct: 74  VFGAMQGVFVEWIGVRPAIKIKSEFGWIMSTIALAIIFKNVAENIWGKDDLP------FP 127

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           + +    F       +     V+LG   +  ++ ++ R++    A     +++ A   + 
Sbjct: 128 TPLPATPFQVLGANVQPMQVVVVLGALAMMLAVEVFNRKSIYGKAVVATSNDRDAAGLMG 187

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                    ++A+SSA   +AG   A     ++      +  +   ++ I+GG+TS   +
Sbjct: 188 INTSMVITFSYALSSATAALAGVLIATL--TLTGATMGTALGLKAFAVAIIGGLTSGMGV 245

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
                IL              +  +        +       +
Sbjct: 246 IVGGLILGIAETTTGFYISTGYKEVPGLVLLLLVLAIKPAGL 287


>gi|319790853|ref|YP_004152493.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315593316|gb|ADU34382.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 320

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 52/299 (17%), Positives = 111/299 (37%), Gaps = 12/299 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +           +        ++  QI+I+ +FA  L + +G  G+L++     +  GAY
Sbjct: 13  IAEVAFWLALASSFFLLPDKLTLMSQIMIFGLFAVSLDMALGYAGILTVGHAAFFGAGAY 72

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  +L           +  + ++SG  G  +    ++       + T+ +  +   +  +
Sbjct: 73  AAGLLAKYGWSEPLTGLAFALVVSGLLGYALSYLVVRGADLTRLMITIGVCVLLYELANR 132

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              IT G  G+               +I        F +Y    +    G+      ++ 
Sbjct: 133 LSGITGGTDGLQGV------------VIAPVLGFFEFDLYGKTAFGYAFGVVLAMFLLVR 180

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            + R+    A R I D++K   ++ + +      A+A S+A  G+AGA  A +   +  +
Sbjct: 181 LVLRSPFGLALRGIHDSRKRMTAIGSPVEARLRMAYAFSAAVAGVAGALLAQTTQFVGIE 240

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
              F+ +  V+ I++LGG   L        + + V +    MN  Y+   L       +
Sbjct: 241 SIGFNRSAEVLIILVLGGTGRLYGGMIGAIVYMLVHDWFADMNPQYWMFWLGIFLIAAV 299


>gi|89902264|ref|YP_524735.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89347001|gb|ABD71204.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 291

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 89/305 (29%), Gaps = 25/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S   Q  IY + A G  ++  +   +S        +GA+  +   +  G   WL +  
Sbjct: 7   VISGIAQGCIYGLIALGFVLIYKATETVSFAQGELMMLGAFGGLAGMTLLGFPYWLSVLG 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       GM++    ++          ++    F  +++        +  I +   +  
Sbjct: 67  AIAAMALFGMVLERVVIRP---------ILGQPAFSIVMLTIGIGYVARGLITMIPNIGT 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +    +   +  + ++  +    V+     L   +    R + +  A +    NQ 
Sbjct: 118 ETHMLPVPYKDQIWHLAGLVLNVEQMVVIGVTGVLCVLLYTLFRYSKLGIAMQAASQNQL 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A + +   +      A+        +A                     +      ++GG 
Sbjct: 178 AAYYMGIPVKRLNGIAW---GLAAAVAAIAGLLLAPITFVHANMGFIGLKAFPAAVVGGF 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        I+  V  L        F                   I + ++++++ + 
Sbjct: 235 GSLPGAIVGGLIIGIVESLSGFYLPDGFKDTAA-------------YIVVLIMLVVKPNG 281

Query: 339 LLRLR 343
           L   +
Sbjct: 282 LFGEK 286


>gi|227327877|ref|ZP_03831901.1| ribose ABC transporter permease protein [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 322

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 95/312 (30%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLILIAVVSAMSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   +         ++  + +  +  +    G   G+   K +      ATL+M  + + 
Sbjct: 82  LTG-AVAASIVGLEVNALVAVFGALALGALIGAGTGVIVSKGKVQAFI-ATLVMMLLLRG 139

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + +   +    G                      F    +   + +   +  M  + A
Sbjct: 140 VTMVYTNGSPVNTGFSDVA---------------DAFGWFGIGRPLGIPTPIWIMAIVFA 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 185 AAWYMLHHTRLGRYIYALGGNESATRLSGISVDRVKIIVYSLCGLLSALAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|319762510|ref|YP_004126447.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|330825640|ref|YP_004388943.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317117071|gb|ADU99559.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|329311012|gb|AEB85427.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 285

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 50/288 (17%), Positives = 97/288 (33%), Gaps = 27/288 (9%)

Query: 53  AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112
           A GL+++ G LG+++      Y +GAY       R   S  + +  +   +   G ++  
Sbjct: 18  AAGLTLIFGMLGVINFAHGAIYMLGAYVSY-ETGRRTGSFLMGVLAATFFTALAGAVIEK 76

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
            +L+   +      LI++     IL        G     VA    + GT           
Sbjct: 77  LTLRPLYERPHFYQLILTFGLILILSDVVRFVWGPGYQEVAIPPLWNGT----------V 126

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
                   ++  +V+     +SA + L L ++      R    + +    L   +   ++
Sbjct: 127 DMLGSTIPMYRLFVIGFGALVSAGLYLVLEKSTFGMLVRAASSDAEMVRILGLPVGAIRM 186

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
           + FA      G+AGA  A             +  I    +VILGG+ ++     A+ ++ 
Sbjct: 187 AVFATGCGLSGLAGAIAAPLFPI--ELGMATNTIIDCFIVVILGGLGNIRGAIAASMLIG 244

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
            V  L       + +               +  + L   +L R   L 
Sbjct: 245 MVRALGYVYLPGWVD--------------IMTFVLLIGTLLTRPQGLF 278


>gi|261407500|ref|YP_003243741.1| inner-membrane translocator [Paenibacillus sp. Y412MC10]
 gi|261283963|gb|ACX65934.1| inner-membrane translocator [Paenibacillus sp. Y412MC10]
          Length = 339

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/311 (9%), Positives = 93/311 (29%), Gaps = 7/311 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ ++  + + +      +   +  +  Q    ++ A G + ++   G + L+     
Sbjct: 18  IFVVLILLVIGIAVADPNFLAFSTLRDILQQSSTRLIIALGAAFIL-ITGGVDLSAGRVV 76

Query: 75  AIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            + A     +L +    + +        +     + +    +    +   +A L +    
Sbjct: 77  GLTAVVSASMLQTEVYANRFFPDLPQVSVLLPILIGIVAGLIVGLINGFIVAKLHVPPFI 136

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +               +          +R     +            + Y+++   F+
Sbjct: 137 ATLGTMVGIYGVNSIYFDMEPNQSQPIGGLRPDFTVWGSGYIDFGGGYSLPYIVIIAIFV 196

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +    +   +T +      I  N +A       +    ++ +A+S A  G+AG   AA  
Sbjct: 197 AFVCWVIFNKTRLGKNMYAIGGNVQAAHVSGINVARNLIAIYAISGALYGIAGVLEAART 256

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              + +     E   + + V+      GG+ ++  +     I   +      +    +  
Sbjct: 257 GGATNNYGNMYELDAIAACVVGGVSTAGGIGTVPGVMAGVLIFGVINYGLTFIGVSPYWQ 316

Query: 309 LLKFDCSFNMR 319
           L+         
Sbjct: 317 LIIKGLIIVAA 327


>gi|331699977|ref|YP_004336216.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326954666|gb|AEA28363.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 293

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 90/306 (29%), Gaps = 25/306 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            ++        +Y +   G+  +    GL +        +GA   V +       +  L 
Sbjct: 6   YFVVIGLGVGSVYALSGLGIVTLFAGSGLANFAQGDFMVLGALVAVNVVGAGFGYLPALA 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +++ A  ++ GL +L  R   + +          +++I                  
Sbjct: 66  TAVVVVAAAGLVLGGLFTLPMRHRRVDV----------DVVIIGTLGVATTMTTLSGIWF 115

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + S +     P   +        +L G   +  ++  + R T +    R +  +
Sbjct: 116 GRQPQRLDSPLAGAFIPIGDLQVPAHYALLLAGAALVFGAVHWFHRHTDVGLQLRAVASS 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             A       +    + A+ +++   G+AG   A+              N    +  I+G
Sbjct: 176 VPAARDAGVRVGRMLVVAWTIAALVGGVAGVLVASVVPIAPEAALPLGVNG--FAAAIIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S +       ++     L  G         +               + L  V+++R 
Sbjct: 234 GLASPAGAVVGGLLIGVAEALAGGYLNDTLRQAVAP-------------VVLLAVLILRP 280

Query: 337 HSLLRL 342
             LL  
Sbjct: 281 GGLLGR 286


>gi|238792535|ref|ZP_04636168.1| Inner-membrane translocator [Yersinia intermedia ATCC 29909]
 gi|238728170|gb|EEQ19691.1| Inner-membrane translocator [Yersinia intermedia ATCC 29909]
          Length = 346

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/329 (14%), Positives = 99/329 (30%), Gaps = 25/329 (7%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLG-----ATKSQKYIDSMGIQILIYVMFAWGLSI 58
           F  RL K   I  ++  +  +  FL           +   +  + +Q+ I  + A G++ 
Sbjct: 24  FKGRLPKDTGIFIVMIGIALIFEFLGWFIRDQSFLLNPNRLLLIVLQVSIIGIIAVGVTQ 83

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           V+ + G + L+     A+ A     L              S  IS     ++ LP+    
Sbjct: 84  VIITTG-IDLSSGSLIALTAVVAASLAQ-----------TSESISPMYPHLLDLPAAIPI 131

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
              + +  L        I     P      G+ V+ R      T  + + F     + + 
Sbjct: 132 TAGVGVGILCGFINGFLITRTSIPPFIATLGMMVSARGLAQYYTKGNPVSFLSDDFTAIG 191

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                  + L +        + L+ T        I  N  +       +    ++ + ++
Sbjct: 192 QGAMPVIIFLVIA---VIFHIALKHTRYGKYVYAIGGNMISAKVSGINVNKYLVTVYTIA 248

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIG 293
               G+AG   AA        M +  E   + + VI     +GG+  ++       IL  
Sbjct: 249 GGLAGLAGVVLAARVSSGQSSMGQSYELDAIAAAVIGGSSLMGGVGRITGTVIGAVILGL 308

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           +      +    +   +            
Sbjct: 309 IKSGFTFIGVDSYIQDIIKGIIIVSAVAI 337


>gi|167461242|ref|ZP_02326331.1| RbsC [Paenibacillus larvae subsp. larvae BRL-230010]
 gi|322382062|ref|ZP_08055998.1| ribose ABC transporter-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153977|gb|EFX46321.1| ribose ABC transporter-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 322

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/302 (15%), Positives = 100/302 (33%), Gaps = 25/302 (8%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           + +   +      I ++  Q+ I  + A+G++ V+   G + L+     A+ +     + 
Sbjct: 35  VSVLNPSFLEPLNILNLLRQVSINALIAFGMTFVI-LTGGIDLSVGSILALSSAFIANML 93

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
                   L I +   + G  GMI GL   + +      ATL    IF+ + +       
Sbjct: 94  VSGFE-PILAIIIGCFLGGMMGMINGLMITQGKMAPFI-ATLATITIFRGLTL------- 144

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                     +Y  G  +  L     F      Y+  +    + M    A + + L +T+
Sbjct: 145 ----------VYTDGNPITGLGDSMTFQLLGRGYQFGIPVPAITMIITFAVLWVILHKTS 194

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
                  I  N+KA       +   K+  ++++  F  +AGA   +  +   P      E
Sbjct: 195 FGRKTYAIGGNEKAAIVSGIKVSRFKIMIYSLAGLFSALAGAILTSRLNSAQPTAGTSYE 254

Query: 266 NIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              + ++V     + GG   +        I+  +      +    F  ++       +  
Sbjct: 255 LDAIAAVVLGGTSLSGGRGRIVGTLIGALIIGTLNNGLNLLGVSSFYQMVVKGIVILIAV 314

Query: 321 TT 322
             
Sbjct: 315 LI 316


>gi|297190816|ref|ZP_06908214.1| ABC transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197722317|gb|EDY66225.1| ABC transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 344

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/318 (12%), Positives = 92/318 (28%), Gaps = 25/318 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +L +LAV+  +          +   +  +  Q  +  +   G++ V+ + G + L+
Sbjct: 37  RNLSLLGVLAVLVAVGGITKPDEFLATSNLQLVLTQASVIGVVTVGMTFVI-TSGGIDLS 95

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+ A  +    +        ++  + ++   CG++ GL     R      ATL M
Sbjct: 96  VGAIVAL-ASVWATTVATQEYGFTGILFTAVIVGVGCGLVNGLLIAYGRMVPFI-ATLAM 153

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
               + + ++                    G T    +           Y + +  ++L 
Sbjct: 154 LASARGLALQITD-----------------GKTQIVTVDSVLDLGIRDAYILGIPPLVLV 196

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              ++    L L RT        +  N +A       +   +L  + +S    G+A    
Sbjct: 197 FAAVTVIGWLVLNRTTFGRRTVAVGGNAEAARLAGIDVRRQRLYLYLLSGLCCGIAAFML 256

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFY 304
                          E   + + +I      GG  ++        +   +  +    N  
Sbjct: 257 IVLAGSGQNTNGNLYELDAIAAAIIGGTLLSGGRGTIVGSVLGVLVFTTITNIFALNNLE 316

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +            
Sbjct: 317 SAVQQIAKGAIIVAAVLV 334


>gi|145588543|ref|YP_001155140.1| inner-membrane translocator [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145046949|gb|ABP33576.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 292

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 88/280 (31%), Gaps = 12/280 (4%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           +IY + A+G  +   + G L+     A  +GA   +     +G++ W +IP+  +     
Sbjct: 16  MIYAVIAFGFQLTFATSGTLNFGQGEALMLGALVGLTCVDTFGMNYWAMIPIVCIFGMIQ 75

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G  + L  ++      +    IMS I   I+ K                         S 
Sbjct: 76  GSFVELIGVRPAIKIKSEFGWIMSTIALGIIFKNVAENI----------WGRDALPFPSP 125

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
           +                  V++G   +   +  + R+T    A     +++ A   +   
Sbjct: 126 LPMEPMSFLGANILPMEILVVVGALVMMLLVEFFNRKTIYGKAVVATSNDRDAAGLMGIN 185

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
                  ++A+SS     AG   A     ++      +  +   ++ I+GG++S   I  
Sbjct: 186 TSLVITFSYALSSLTAAFAGVLIAPL--TLTGATMGGALGLKAFAVAIIGGLSSGLGIIV 243

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
              IL  +           +  +        +       +
Sbjct: 244 GGLILGIIETATGFYFSTGYKDVPGLILLLLVLAYKPSGL 283


>gi|328555303|gb|AEB25795.1| ribose ABC transporter (permease) [Bacillus amyloliquefaciens
           TA208]
          Length = 323

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 97/300 (32%), Gaps = 25/300 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +   +      I ++  Q+ I  + A+G++ V+   G + L+     A+ +     +   
Sbjct: 38  VLNPSFLEPLNILNLLRQVAINALIAFGMTFVI-LTGGIDLSVGAILALSSALVAGMMVS 96

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
               I  +I   A+ +    +   L +         IATL    +F+ + +         
Sbjct: 97  GIDPILAVILGCAIGAVLGMINGFLITKG--KMAPFIATLATMTVFRGLTL--------- 145

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                   +Y  G  +  L   + F      Y + +    + M     ++ + L +T   
Sbjct: 146 --------VYTDGNPITGLGTNYAFQLFGRGYFLGIPVPAITMLIAFLALWILLHKTPFG 197

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                I  N+KA       +   K+  ++++     +AGA   +  +   P   +  E  
Sbjct: 198 RRTYAIGGNEKAALISGIKVPRIKIMIYSLTGLLSALAGAILTSRLNSAQPTAGESYELD 257

Query: 268 IVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V     + GG   +        I+  +      +    F  L+       +    
Sbjct: 258 AIAAVVLGGTSLSGGRGRIIGTLIGVLIIGTLNNGLNLLGVSSFYQLVVKGIVILIAVLL 317


>gi|323528177|ref|YP_004230329.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
 gi|323385179|gb|ADX57269.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
          Length = 353

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 96/310 (30%), Gaps = 23/310 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++ ++      L      + + +  + + + I  +   G+++V+  +  + L+     
Sbjct: 40  LFIVLILLIAGTALARPQFLNLQNLRDVLLNVSIISLLTAGMTVVI-LMRHIDLSVGSTV 98

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I AY+   L   +     ++   + +  G     +    +        +ATL    IF+
Sbjct: 99  GISAYAVGSLYVAFPQMPVIVALAAGLAIGLVAGGINALLVAVGRVPSLVATLSTLYIFR 158

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                W                        SL   F   ++   + I    ++  +  L+
Sbjct: 159 GADYAWVH---------------GGQINATSLPDAFSRLATGTFFGIPTLALIAVVVLLA 203

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +I L   R         I  N +A       +    ++ F +S A  G AGA + A   
Sbjct: 204 LAIYLKQFRG--GREHYAIGSNPEAARLAGVNVERRVMAGFLLSGAIAGFAGALWLARFG 261

Query: 255 RISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +          +     +V S+ I GG+ ++        +L  +      ++   F   
Sbjct: 262 TVDASTAKGIELQVVAAAVVGSVAITGGVGTILGATLGALVLGVISIALVVLHVSPFWEQ 321

Query: 310 LKFDCSFNMR 319
                     
Sbjct: 322 AIEGALIVAA 331


>gi|312198591|ref|YP_004018652.1| urea ABC transporter permease [Frankia sp. EuI1c]
 gi|311229927|gb|ADP82782.1| urea ABC transporter, permease protein UrtC [Frankia sp. EuI1c]
          Length = 415

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/328 (13%), Positives = 87/328 (26%), Gaps = 32/328 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSI--VVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                  Y   +  + L Y +   G+ +    G  G+L+L   +   +G Y+  +    +
Sbjct: 46  PLFLGASYQLPLFTKYLCYAIIGIGIGLAW--GQGGMLTLGQGLFVGLGGYAMGMYLKLH 103

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
                 +                 P         A+    +       L+ ++    G  
Sbjct: 104 DAGPGKVPDFMNWSGVEKLPAFWEPFRSPVVALAAVIVAPVVVATLLGLLVFRQRVRGAY 163

Query: 149 GIYVADRL--------------YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +   L                    + +   FF   +        +YY+  G+  + 
Sbjct: 164 FAILTQALAAAFVILLVGQQGYTGGTNGLTNFSSFFGIDTYADNGRRELYYITAGVLLVI 223

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             ++  +  +        IRD +     L       K  AFA+S+    + GA       
Sbjct: 224 FLLLRLVVLSRFGRLLLAIRDGEDRVRFLGYDPTVIKTIAFAMSAVTASVGGALIVPVIG 283

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            I+P M     +I ++  V +GG  SL                          +   F  
Sbjct: 284 IINPGMLDIVPSIELVIAVAVGGRYSLV--------------GAVVGAIVVNWAKSTFSD 329

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +    T         VI      +  L
Sbjct: 330 DYPSAWTYFQGALFIGVIAFLPRGISGL 357


>gi|302522408|ref|ZP_07274750.1| ABC transporter permease [Streptomyces sp. SPB78]
 gi|302431303|gb|EFL03119.1| ABC transporter permease [Streptomyces sp. SPB78]
          Length = 348

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 100/326 (30%), Gaps = 25/326 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + VV  L   L      SQ+ +  + +   I V+ A G ++VV     + L+     
Sbjct: 31  VAAVLVVMLLATQLTNTGFLSQQGVKDLLLNATILVLVATGQAVVV-LTRNVDLSVGSVL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I A++        G S W+ +  +       G++ G      +   L +    +  +  
Sbjct: 90  GISAFAAG-DYLHGGGSPWVAVLYAVAAGAVFGLLNGALVSLGKVPALVVTLGTLYIV-- 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                              D ++     + +      F          + Y+ +    + 
Sbjct: 147 ----------------RGIDSVWVGSRQIVAADLPNGFVDFGHDGVWAVPYLAVLALAVL 190

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++  +LR          +  + +A       +    L+A+ +     G+AGA + A   
Sbjct: 191 LAVGYYLRHYRGGRELYALGSSPEAATLAGIAVRKRVLTAYVLCGVLAGLAGALYLARFG 250

Query: 255 RISP-----DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +               ++V  +   GG  ++   A    +L  +  +   +        
Sbjct: 251 NVDSATGNGYELTVVSAVVVGGVAFTGGAGTVYGAALGALLLTSINSVLPAIGVSSVWVT 310

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMR 335
                   +      V+AL +  ++R
Sbjct: 311 AINGVLLLLAIAVDRVLALRVAAVLR 336


>gi|154244386|ref|YP_001415344.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154158471|gb|ABS65687.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 293

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 99/305 (32%), Gaps = 28/305 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +  + Y++ A GLS++    G+++L     YAIGAY  V +G+R+          
Sbjct: 12  VLNGLLVGVAYLLIALGLSLIFSLGGIVNLAHGGFYAIGAYIGVEIGNRF--GFPAAFVA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     GM++             I +L+++     ++ +   +T G   I  A   + 
Sbjct: 70  APLSVAVIGMVVERLLFSRFYRADPILSLLLTFGLAMVIEQALRMTFGATPIPFAIPEFL 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                 IY  +   +LL        + L L+RTA     R    N  
Sbjct: 130 KGQVF----------VGDFIYSRYRITILLVAAAAVLGLWLLLQRTAFGRVVRAGVQNPD 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L  ++     +  A+     G+AG   A                     +V++GG+
Sbjct: 180 MVGALGISLRPYLTAVAAIGIGLAGLAGIMLAP--ISGVHPAMGAEILTAAFVVVVIGGL 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S   +  A  ++  V  L          + +       +                R   
Sbjct: 238 GSFWGVVLAGLLVGLVRGLTVYFIPPAAEASMYLLMLMVLLL--------------RPRG 283

Query: 339 LLRLR 343
           L   R
Sbjct: 284 LFGER 288


>gi|311103747|ref|YP_003976600.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310758436|gb|ADP13885.1| inner-membrane translocator 7 [Achromobacter xylosoxidans A8]
          Length = 300

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 90/312 (28%), Gaps = 24/312 (7%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
               Q+ + S  +   +Y + A  + I+  +  + +      + +G Y  + L    G  
Sbjct: 7   WLFLQQGVLSGLVTGSVYALLAVAVVIIFKTTDVPNFAQGEIFMVGGYIALFLTLVMGWP 66

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             ++IP++ +       +     ++          +    +   ++I    +     G+ 
Sbjct: 67  YLVVIPITLLAVAVLSGLFQRVVMER--------VIASKGVGVQMVIATLGLAYALKGLV 118

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
               L     ++  L           +       +      +   +      T +  A R
Sbjct: 119 RQTGLGDTPRSLPPLASTDAIIIGDAVLTQLDLVIFAVAVAVMLLLFGMFTYTRVGRAMR 178

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +  N KA   +   +   ++  +A++     +A                          
Sbjct: 179 AVGMNPKAARLVGVNLTRIRMLVWALAGLISAVAALLITPKILITPDIGHIAILAYAAAI 238

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
              +GG+TSL        ++     L           +  F             +A+ +V
Sbjct: 239 ---VGGITSLPGAVVGGFVIGVAENLVGLFISTNAIVVAPF-------------VAIMVV 282

Query: 332 ILMRSHSLLRLR 343
           +L+R   LL  +
Sbjct: 283 LLLRPQGLLGGK 294


>gi|241763904|ref|ZP_04761947.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
 gi|241366799|gb|EER61231.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
          Length = 440

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/332 (13%), Positives = 110/332 (33%), Gaps = 33/332 (9%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L+      L+ +            +M  QI   ++     ++++G  G+LS    +   +
Sbjct: 25  LVVWGVFALVLIVAPMLFRSSLALTMLSQIGYLIIICLSYNMLLGQGGMLSFGHAVYTGL 84

Query: 77  GAYSYVILGS-----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           G++  +   +        + + L+  V  +      +++G  + K  G   A+ TL + E
Sbjct: 85  GSFIAIHAMNLAGKGALPVPLLLIPLVGGLAGMFFAVLLGFVTTKKSGTTFAMITLGIGE 144

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +  ++ + +     G+ GI                +             I +YY++   C
Sbjct: 145 LVASMALMFPEFFGGEGGIT------------TDRVYGQPLFGITFGPAIQVYYLIAAYC 192

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           F+  + +     T +      +RDN +    +       +  AF ++  F G+ G   A 
Sbjct: 193 FVCTAAMFAFTGTPLGRILNAVRDNPERVEFIGYNTQRVRYFAFIIAGFFAGIGGGLAAI 252

Query: 252 SRDRIS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           + + ++  D      +   +    LGG T          +L+    L   ++  +     
Sbjct: 253 NFEIVTGADSVNVVRSGGYLLFTFLGGATFFFGPIIGAVLLVFASVLLSELSKAW----- 307

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                        + +    +++     +  L
Sbjct: 308 ----------LLYLGLVFLFMVMYAPGGIASL 329


>gi|117927926|ref|YP_872477.1| inner-membrane translocator [Acidothermus cellulolyticus 11B]
 gi|117648389|gb|ABK52491.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Acidothermus cellulolyticus 11B]
          Length = 341

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 82/297 (27%), Gaps = 22/297 (7%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           L      S   +  M  ++ +  + A G +I++ + G + L+   A  +           
Sbjct: 49  LINTRFFSPANLSIMLQEVAVIGLLALGQTIIILTAG-IDLSVGAAMILAQMVMAGTEVN 107

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
            G+   L + +  +++   G+  G    + R          +       L          
Sbjct: 108 SGVPAGLALVIGLLVALLTGLANGFLVTRLRVPPFIATLGTLGVFTAAGLKY-------A 160

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
            G  V      +      L     F  +  +  + ++Y+         +    L RTA  
Sbjct: 161 NGQTVNPPQSSILLWSGKLFGAGSFRITTGVVTMLVFYL---------AFAYILGRTAWG 211

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                + D+ +A            LS + ++    G+AG          S ++       
Sbjct: 212 RHVYAVGDDIEAARLSGIHASRVLLSVYLIAGLIYGVAGWVQIGRVSSASTNISPTLNLD 271

Query: 268 IVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            + ++VI      GG  ++        I+                  L         
Sbjct: 272 SITAVVIGGVSLFGGRGAVLGTLLGALIVQVFQNGLALAGVQELYQQLAEGLLVIAA 328


>gi|171741555|ref|ZP_02917362.1| hypothetical protein BIFDEN_00641 [Bifidobacterium dentium ATCC
           27678]
 gi|283455115|ref|YP_003359679.1| sugar ABC transporter permease [Bifidobacterium dentium Bd1]
 gi|306823827|ref|ZP_07457201.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Bifidobacterium dentium ATCC 27679]
 gi|309802350|ref|ZP_07696457.1| ribose transport system permease protein RbsC [Bifidobacterium
           dentium JCVIHMP022]
 gi|171277169|gb|EDT44830.1| hypothetical protein BIFDEN_00641 [Bifidobacterium dentium ATCC
           27678]
 gi|283101749|gb|ADB08855.1| ABC-type sugar transporter permease component [Bifidobacterium
           dentium Bd1]
 gi|304552825|gb|EFM40738.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Bifidobacterium dentium ATCC 27679]
 gi|308220950|gb|EFO77255.1| ribose transport system permease protein RbsC [Bifidobacterium
           dentium JCVIHMP022]
          Length = 329

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 96/310 (30%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + L +   A  S   + ++GIQ     + A+G + V+ + G + L+     
Sbjct: 30  ALIGLIILCIALSIVAPAFLSASNLMNVGIQAATVAILAFGQTFVIVAAG-IDLSVGATA 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ +      G+  GL   + I V  +     G + G+ +   R         +MS    
Sbjct: 89  AVASMLVAYTGANMGLPAGVTIIVGLLAGAVFGALSGMMNAFLRLPSFIATLAMMSVARG 148

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+         +G+        +G  V  ++       + VI                
Sbjct: 149 LTLVISDGRPISTSGMVNFFGGTIIGIPVPIIMMVIMGIIASVILNF------------- 195

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                    T I  +   +  N +A      ++   ++  F +S  F  +AG   A    
Sbjct: 196 ---------TTIGRSMYAVGGNMEASRLSGISVHKTQIMVFVLSGIFAAVAGLVIAGRLH 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + S+VI      GG   +S       +L  +      +N   F   
Sbjct: 247 SAQPQAADGYEMDAIASVVIGGASLSGGKGKVSGTFIGAILLAVIRNGLNILNVSSFWQK 306

Query: 310 LKFDCSFNMR 319
           +         
Sbjct: 307 VVIGLVIAFA 316


>gi|119960934|ref|YP_946162.1| D-ribose ABC transporter permease protein [Arthrobacter aurescens
           TC1]
 gi|119947793|gb|ABM06704.1| putative D-ribose ABC transporter permease protein [Arthrobacter
           aurescens TC1]
          Length = 381

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/320 (13%), Positives = 100/320 (31%), Gaps = 27/320 (8%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
             L  +  +  L+         + + + S+ I   +  + A G  +V+   G + L+   
Sbjct: 36  GYLLAVGAIVLLVGSALSQHFMTSRNLISVLITASVVSVLAVGQYLVI-VTGGIDLSVGA 94

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
             A+ +    +   +     W +  + A+++     +     + + G    I TL M  I
Sbjct: 95  VAAVSSVIAGLALQQGT--PWPVALLLALLAAGLIGVFNGLMIVYGGITPFIVTLAMMSI 152

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            + +                    Y L T  +  I    F ++F      M   ++    
Sbjct: 153 ARGVA-------------------YMLQTGRQVAIEDQGFLAAFTSGVGPMPAPVMIALL 193

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           ++    + + +T        +  N +A       I    + A+ +SS   G+ G   AA 
Sbjct: 194 VTIVFAVVMSQTRFGRRLFALGGNPEAARLSGLPIKRDIIGAYFLSSLLAGLGGVMIAAQ 253

Query: 253 RDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
               S  + +  E   + ++V+      GG            I+  ++ +   +      
Sbjct: 254 LTEGSAIIGEGYELNAIAAVVVGGASLFGGTGDPVSAVLGGLIIAVILNIMDLLGIQAQP 313

Query: 308 SLLKFDCSFNMRHTTLMVIA 327
            L+       +       + 
Sbjct: 314 QLVVKGAVILLAVLFTSGVG 333


>gi|163846508|ref|YP_001634552.1| inner-membrane translocator [Chloroflexus aurantiacus J-10-fl]
 gi|222524293|ref|YP_002568764.1| inner-membrane translocator [Chloroflexus sp. Y-400-fl]
 gi|163667797|gb|ABY34163.1| inner-membrane translocator [Chloroflexus aurantiacus J-10-fl]
 gi|222448172|gb|ACM52438.1| inner-membrane translocator [Chloroflexus sp. Y-400-fl]
          Length = 388

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 88/305 (28%), Gaps = 24/305 (7%)

Query: 57  SI------VVGSLGLLSLNCVIAYAIGAYSYV-----------ILGSRYGLSIWLLIPVS 99
           +I      V G L  ++      + IG                +      + + L++ ++
Sbjct: 83  TIALGYTMVYGVLEFINFAHGEIFMIGGVVGATVSFILVSSGTLASVPPLVFVLLVVLIA 142

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI--TNGKAGIYVADRLY 157
               G   + +   + +   +   +  LI +     IL     +  TN   G     +  
Sbjct: 143 MAFCGTLAVTVERIAYRPLRNAPRLVPLISAIGMSLILQDLARLVMTNSPLGFNARYQTP 202

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
             G  +R         S  VI        ++    +   +   +  T +  A R    + 
Sbjct: 203 DFGQPIRLFEMQIGERSVPVILSPRDLIFIVAATLMLIVLNYVVNATKLGKAIRATAQDM 262

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                +   +       F +  A  G AGA F      ++P M      +   +  +LGG
Sbjct: 263 PTASLMGIDVNRIIALTFLIGGALGGAAGALFGLRIGTVNPYM-GLIPGLKAFTAAVLGG 321

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + +++       +L  +                  + S            L L+++ R  
Sbjct: 322 IGNITGAMVGGIVLGFLEAFVAAY----LAIFTGGNFSGAAYADIAAFSILILLLIFRPS 377

Query: 338 SLLRL 342
            LL  
Sbjct: 378 GLLGE 382


>gi|302340092|ref|YP_003805298.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
 gi|301637277|gb|ADK82704.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
          Length = 339

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 104/318 (32%), Gaps = 25/318 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           + +  + ++ +++ + L        +   I S+  QI I +  A G+++V+  LG + L+
Sbjct: 19  RNNAGILVVLILFGVFLSFTTDNFLTNGNIISVLRQISINMYIALGMTLVI-ILGGIDLS 77

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+     V      GL +WL I +  ++    G+I G+   KF+     +     
Sbjct: 78  VGSIVAMSGTLIVGFIVTQGLPLWLAIVLGLLLGTLAGLINGIIIAKFKVPAFIVTM--- 134

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                        + N  +G+                         F    + + Y+++ 
Sbjct: 135 ------------AMMNIASGVAYVYSGGRSTRITEDFFVQIGTGYIFGKIPLPVVYMIVL 182

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +    A  +  L +T        I  N+++       I+  +++ F ++      AG   
Sbjct: 183 I----AVFVFMLNKTKFGTYVYAIGGNRESAKVSGVPIMKVEIAVFTLTGLLSAFAGLVL 238

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A+      P +    E   + + V     + GG   +S       ++  +      M   
Sbjct: 239 ASRMYSGQPSVGSGYELDAIAACVLGGVSMAGGKGRISGTVIGAMVIGIISNGLNLMGVS 298

Query: 305 YFNSLLKFDCSFNMRHTT 322
            F  L+            
Sbjct: 299 SFWQLIVKGVIILFAILI 316


>gi|307727546|ref|YP_003910759.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|307588071|gb|ADN61468.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
          Length = 353

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 97/310 (31%), Gaps = 23/310 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++ ++      L      + + +  + + + I  +   G+++V+  +  + L+     
Sbjct: 40  LFIVLILLIAGTALARPQFLNMQNLRDVLLNVSIISLLTAGMTVVI-LMRHIDLSVGSTV 98

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I AY+   L   +     ++   + +  G     +    +        +ATL    IF+
Sbjct: 99  GISAYAVGSLYVAFPHMPVIVALAAGLAIGLVAGGINALLVAVGRVPSLVATLSTLYIFR 158

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                W                        SL   F   ++  ++ I    ++  +  L+
Sbjct: 159 GADYAWVH---------------GGQINATSLPEAFSRLATGTLFGIPTLALIALVVLLA 203

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++ L   R         I  N +A       +    ++ F +S A  G AGA + A   
Sbjct: 204 LALYLKQFRG--GREHYAIGSNPEAARLAGVNVERRVMAGFLLSGAIAGFAGALWLARFG 261

Query: 255 RISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +          +     +V S+ I GG+ ++        +L  +      ++   F   
Sbjct: 262 TVDASTAKGIELQVVAAAVVGSVAITGGVGTILGATLGALVLGVISIALVVLHVSPFWEQ 321

Query: 310 LKFDCSFNMR 319
                     
Sbjct: 322 AIEGALIVAA 331


>gi|284162420|ref|YP_003401043.1| inner-membrane translocator [Archaeoglobus profundus DSM 5631]
 gi|284012417|gb|ADB58370.1| inner-membrane translocator [Archaeoglobus profundus DSM 5631]
          Length = 304

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 96/301 (31%), Gaps = 14/301 (4%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   + V+ A GL+I   +  + +         G+Y  +       +  +  +P+  + 
Sbjct: 8   LIYANLMVLLALGLTITYITTSVPNFAQGSFAVFGSYVALTFLQICNIHPYHSLPLCFLF 67

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
            G  G+   L +L+      A    +M       ++    I         +  L  +   
Sbjct: 68  GGLLGLATYLIALRPLIGRGASVVTLMIATLAWDILLLGVI------GAYSGFLSSITKK 121

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             +   F       V     +    L +      +   L +T    A R   +N      
Sbjct: 122 STTNFLFTPLDFPVVGLHGRLVVSSLVILLTIVFLTFLLYKTKFGIALRASMENPALAEI 181

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   + + +L ++ +S A  G+AG      +      +      + + +  I+GG++SL 
Sbjct: 182 MGINVEYTRLFSWFLSGALAGLAGGILPFKQQI--FPVTGDVLIVSIFASSIVGGLSSLL 239

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  I+     L        +   L F  +       + +  L   +L+    ++ +
Sbjct: 240 GAVIGGYIVGLSESLAS------YALSLYFGPAILSYSKVIPLSILIATLLIAPKGIVSI 293

Query: 343 R 343
           R
Sbjct: 294 R 294


>gi|226356409|ref|YP_002786149.1| branched-chain amino acid ABC transporter permease [Deinococcus
           deserti VCD115]
 gi|226318399|gb|ACO46395.1| putative branched-chain amino acid ABC transporter, permease
           component [Deinococcus deserti VCD115]
          Length = 298

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/311 (15%), Positives = 104/311 (33%), Gaps = 19/311 (6%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
              + + +  +   IY + A G  ++  S  +++       A GA+      ++ G++ W
Sbjct: 3   LLPQLLIAGVVIGSIYALAALGFVLIYKSSRVINFAHGQIIATGAFI-AFALTQSGMNFW 61

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L   ++ + +   GM++    L+       I+ ++++    +++     +T   AG    
Sbjct: 62  LAGLLAMVATFLLGMLIERVFLRRMVGEPIISVIMVTIGLSSVIEGLIHLTPYGAGS--- 118

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                   T  +++                   +L    L A    +  ++ +    R +
Sbjct: 119 -----FSFTTPAVLAGDGLSVLGTQLSRTQIAGVLAALGLLAGFTYFFNKSTLGITMRAV 173

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            D+Q A  S+ T++      A+A +      AG             +        V  +V
Sbjct: 174 ADDQMAAMSVGTSVERVFALAWAAAGLSAAAAGVILGLMSGLTLGGLAGIGL--KVFPVV 231

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ILGG+ S+        ++  +  L  G                         I L  V+L
Sbjct: 232 ILGGLDSVVGAIVGGMLIGVLENLSAGYLDGLVPG--------GGTREVFPFIILIAVLL 283

Query: 334 MRSHSLLRLRT 344
           +R + L   + 
Sbjct: 284 LRPYGLFGTKE 294


>gi|222084829|ref|YP_002543358.1| branched-chain amino acid ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221722277|gb|ACM25433.1| branched-chain amino acid ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 295

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 46/316 (14%), Positives = 103/316 (32%), Gaps = 26/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    I    Y + + GL+I+ G L +++      Y +GA++  +L +
Sbjct: 4   IFGIPLQALLGQLLIGLINGSFYALLSLGLAIIFGMLRVINFAHGAFYMLGAFTAYLLLA 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+  W ++ ++ +I G  G ++    L+       +  L+ +      +        G
Sbjct: 64  YAGIGYWPVLVLAPLIVGLFGAVVERLCLRQLYTIDPLYGLLFTFGMALTIEGTFRYLYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G   A      G               F+   ++  +V++    +     L + +T +
Sbjct: 124 SSGQPYAVPSALAGAK----------NIGFMFLPVYRGWVVVASLVVCIGTWLLIEKTKL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N          +       +    A    AG   A         +   +  
Sbjct: 174 GAYLRAATENSVLVQVFGVNVPVLLTLTYGFGVALAAFAGVLAAPIYQV--SPLMGSNMI 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           IIV ++V++GGM S+        +L     L                  +      ++ +
Sbjct: 232 IIVFAVVVVGGMGSIMGAIVTGYMLGVAEGLTKVF--------------YPEASNIVIFV 277

Query: 327 ALFLVILMRSHSLLRL 342
            + +V+L+R   L   
Sbjct: 278 IMAIVLLLRPAGLFGR 293


>gi|218670721|ref|ZP_03520392.1| urea or short-chain amide ABC transporter, permease protein
           [Rhizobium etli GR56]
          Length = 183

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 61/185 (32%), Gaps = 15/185 (8%)

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                   F    ++      ++++    +  ++++ L+R+A     R +  N++   S+
Sbjct: 13  NPSWMSGAFDFGGLVITWNRLWIIVFSMMVFLTLLMLLKRSAFGLQMRAVTQNRRMASSM 72

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
                +     FA+ S   GMAG   A S+          +  I    +V+ GG+ +L  
Sbjct: 73  GIRTGWVDAFTFALGSGIAGMAGV--ALSQIDNVSPNLGQNYIIDSFMVVVFGGVGNLWG 130

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                  L  V +                          L+++ + L I  R   L  L+
Sbjct: 131 TLVGALSLGVVNKFLEPFAGAVLGK-------------ILVLVLIILFIQKRPRGLFALK 177

Query: 344 TPSNF 348
             +  
Sbjct: 178 GRAVE 182


>gi|72161695|ref|YP_289352.1| amino-acid transmembrane lipoprotein ABC transporter [Thermobifida
           fusca YX]
 gi|71915427|gb|AAZ55329.1| probable amino-acid transmembrane lipoprotein ABC transporter
           [Thermobifida fusca YX]
          Length = 295

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 96/306 (31%), Gaps = 18/306 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y++FA G+S+  G++G+L+      +   A           L +W +I +
Sbjct: 4   LINAVTLGSLYLLFALGMSVAWGTIGILNFAHGSTFMFSAMVAYYTVQMVALPMWAMILL 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A +     ++       F             +I    +     +         +    F
Sbjct: 64  GAAVGMVLSVLTQALIFNFILRRNPDLLKAEMQIVVGGIGAASVLLAIAQHYTKSVPFGF 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +T ++      +    +        +L+    L+     WL+      A R I  N +
Sbjct: 124 SASTFKTTT----YQLGAIHISNVQLVILVAAFGLAGLAAWWLKSARAGLALRAIGVNPE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        L   A + A  G AG         I+ +    S  I   + +ILGG+
Sbjct: 180 VASLMGVDRGRMALGTMAAAGALAGTAGILLTYYLGSIAAET-GDSFLISAFAAIILGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+  +   + IL     L        + S + F               +F+V+L     
Sbjct: 239 GSVIGVVVGSMILALAETLVVTQLSGTWASAVAFG-------------LIFVVLLFLPRG 285

Query: 339 LLRLRT 344
           +   + 
Sbjct: 286 IFGRKE 291


>gi|298246957|ref|ZP_06970762.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963]
 gi|297549616|gb|EFH83482.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963]
          Length = 305

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 99/304 (32%), Gaps = 12/304 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +   +Y + A G+ ++  + G+L+       +        L S   L+ WL   +
Sbjct: 8   LISGLVTGCLYGLLALGIVLIYRTTGVLNFAYGAIASFCTCFMYALMSLAHLNFWLAALL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   S   G ++     +           I +     +L     +               
Sbjct: 68  TLFGSLLFGALLEQGFARPVLRAPIFTKAIATLALALVLETVAQL---------IWPQLT 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +           +   +    V+  +  L  ++ L+L RT++  A R   DN  
Sbjct: 119 SPVRFSTPFEGLALHPGGLYLSLIDLLVVGVIVVLVLALNLFLTRTSLGIAMRATSDNLP 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L  +++++    +AG   A+ +  I          ++     +LGG+
Sbjct: 179 TARLMGIPVGLIFLLVWSLAALIAALAGILLASRQQLIEVRFMDPIL-LLAFVGAVLGGL 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        ++  V  L   +   +    L       +    L+ +A  LV+L+R   
Sbjct: 238 ESLPGALLGGILVGVVDNLLTLLLAGHTLGALNIGDRSIVE--MLIFVAFVLVLLLRPQG 295

Query: 339 LLRL 342
           LL  
Sbjct: 296 LLGR 299


>gi|258654039|ref|YP_003203195.1| inner-membrane translocator [Nakamurella multipartita DSM 44233]
 gi|258557264|gb|ACV80206.1| inner-membrane translocator [Nakamurella multipartita DSM 44233]
          Length = 292

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 89/288 (30%), Gaps = 8/288 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GLS++ G + +L+         GAY+  +   R         P+
Sbjct: 8   LVTGVGLGALYFLVASGLSLIYGLMHVLNFAHGAFLTAGAYAAWVAMGRLSGLGGWAFPL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +I    G I+G          L    +    +   + +    +  G  G         
Sbjct: 68  SVVIGMVVGAIIGAAVEFCLIRPLYQRHIEQVLVTVGLGLMAVALFTGIWGADPQPFARP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T   +                  + +++    L A ++  L+ T I    R   +N+ 
Sbjct: 128 EWTRQTT-------DLFGAAIPNDRFLLIVAAGLLLAGLLALLKYTRIGLVIRAGVENRT 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       FA+  A   + G   +     +S      +  I    +V++GG 
Sbjct: 181 MVQALGIDVRRTFTLVFALGGAAAALGGVLGSVYLGSVS-PGQGTALLIFAFIVVVIGGF 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            S+   A A  ++  V ++           +        +       +
Sbjct: 240 GSIGGTAIAALLVGLVQQMANYYVGSGIGDVSVVLLLAAVLLVRPAGL 287


>gi|144897499|emb|CAM74363.1| branched-chain amino acid ABC transporter, permease protein
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 295

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 111/318 (34%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           ++    +        +    I    Y M + GL+++ G L +++ +    Y +GA+   +
Sbjct: 1   MMTLFGIPTAALFGQLLLGLINGAFYAMLSLGLALIFGLLNIINFSHGAQYMMGAFVAWL 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
             +  G + W+ + ++ +I  A G+++    L        +  L+++     I+  +   
Sbjct: 61  GLTYLGANYWVALALAPVIVAAFGIVLERTMLSRLYKLDHLYGLLLTFGLALIIEGFFRQ 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G +G+  A                  +   F+   I+  +V+     L     L + +
Sbjct: 121 LYGISGMPYAVP----------KELAGGWNLGFMYLPIYRAWVVFASLVLCVGTWLLIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N     +    +       +    A    AG   A         +   
Sbjct: 171 TKLGAYLRAATENPALVQAFGINVPVMITLTYGFGVALAAFAGVLAAPIYSV--NPLMGS 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  I+V ++V++GGM S+        +L  +  L   +              +     T+
Sbjct: 229 NLIIVVFAVVVIGGMGSIMGSIVTGFMLGILEGLTKVV--------------YPEAAGTV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           + + + +V+L++   L  
Sbjct: 275 IFMVMVIVLLIKPAGLFG 292


>gi|221066311|ref|ZP_03542416.1| inner-membrane translocator [Comamonas testosteroni KF-1]
 gi|220711334|gb|EED66702.1| inner-membrane translocator [Comamonas testosteroni KF-1]
          Length = 317

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 52/319 (16%), Positives = 115/319 (36%), Gaps = 27/319 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M + GL+++   +G+L+      Y +GAY          +  W  +  
Sbjct: 10  MLNGVSYGLLLFMLSSGLTLIFSMMGVLNFAHTSFYMLGAYFAY--TLSGIIGFWPALFF 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++ G  G +    SL+    Y  +  L+++     ++++   +  G+  +  A     
Sbjct: 68  SPVLVGVLGALFERYSLRRVHKYGHVPELLVTFGLSYLILEVVQLVWGRGTVPYA----- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + + ++   F      +     +V+L    +  ++ L L RT I    +    N +
Sbjct: 123 ----LPTALQGPLFTLYGTQFPKSRSFVMLVALLMLVAVWLLLTRTRIGLVIQAALKNPE 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    +  F    A  G+AG         ++      S   I+  +V++GGM
Sbjct: 179 MVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NTYVTEPAMAASVGSIIFVVVVVGGM 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFN--------------SLLKFDCSFNMRHTTLM 324
            SL+    A+ ++  V      +++                         + +     L 
Sbjct: 237 GSLAGAFVASLLIGVVQTFAVALDWSLAGLFSSMGHQVNESTFGWPVLRLTLSQVAPILP 296

Query: 325 VIALFLVILMRSHSLLRLR 343
            + L L+++ R   LL  R
Sbjct: 297 YLFLVLILIFRPKGLLGTR 315


>gi|229827108|ref|ZP_04453177.1| hypothetical protein GCWU000182_02492 [Abiotrophia defectiva ATCC
           49176]
 gi|229788726|gb|EEP24840.1| hypothetical protein GCWU000182_02492 [Abiotrophia defectiva ATCC
           49176]
          Length = 333

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 111/321 (34%), Gaps = 14/321 (4%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           ++++Y KIL ++ V Y + + +   A  S   +  +       ++   GL +++   G +
Sbjct: 5   KIDQYQKILIIIIVAYSIFVGVMNPAFLSLGTLFDIIRTSSTTMIVVIGL-LLIMISGGI 63

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            ++ +     G+Y+ + +    G+   L   + +M  G    ++    + +      I T
Sbjct: 64  DVSFMAIALFGSYTGINIMIALGIDNLLFAFLISMTVGCMLGLVNAVLINWLKLPPFIIT 123

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L    +F  I+  +    +  AG+        L + +    +      +    +I +   
Sbjct: 124 LGTQNLFHGIMTTFIGDKSFGAGV--------LPSCLHEFGQATILDINASSGKIGLTVS 175

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            + +  +       L +T        I +++++           +L  +  S    G+ G
Sbjct: 176 FIPVIIVGIVSWFILYKTMTGRGIVAIGNSEESARRAGFNPARIRLFVYGYSGVLAGIMG 235

Query: 247 AFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
             + +  + + P+     E +IV + V     I GG+  +        I+  +      +
Sbjct: 236 IVYVSQVNALYPNKLVGDELMIVAAAVIGGTKITGGLGKIFGAVLGVVIIYLLNSTLILI 295

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
                 + L       +    
Sbjct: 296 GLSSSWNNLFVGAILVISIAV 316


>gi|163795563|ref|ZP_02189529.1| inner-membrane translocator [alpha proteobacterium BAL199]
 gi|159179162|gb|EDP63695.1| inner-membrane translocator [alpha proteobacterium BAL199]
          Length = 298

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/302 (9%), Positives = 97/302 (32%), Gaps = 19/302 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +      + + GL+I+ G + +L++     YA GAY+   L   +  + +     
Sbjct: 8   LLDGLVFSSYLFLVSVGLTIIFGVMKILNVAHGSLYAWGAYTSAYLIGVWSEAGFGDAGT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             MI+ A  ++  +           +   + +     +++           + +      
Sbjct: 68  FLMIAVAALVVGCVLGFVLERG---LIQFMYARDEVIVVLATFATFLILEDVILLVFGVD 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                + +          ++ +++   ++     +   + + L +T        +  +++
Sbjct: 125 PYFAYQPMAYLGSAELGGILRDVYSLTLIGLAAVVGIVLWVGLTQTRWGKLLAAVIHDRE 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              ++   +    +  F + +    + GA+ A          F     ++  ++V++GGM
Sbjct: 185 LSVAMGIDVTKVYVLTFMLGAVLGALGGAYVAPMVSVA--PGFGVEVIVLSFAVVVIGGM 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A    ++     +                         ++   + +V++ R   
Sbjct: 243 GSIPGAAIGALVVGIARAIAVH--------------KLPEVELFVVYGVMAVVLVFRPEG 288

Query: 339 LL 340
           L 
Sbjct: 289 LF 290


>gi|126727054|ref|ZP_01742892.1| Sugar (ribose) ABC transporter (permease) [Rhodobacterales
           bacterium HTCC2150]
 gi|126703726|gb|EBA02821.1| Sugar (ribose) ABC transporter (permease) [Rhodobacterales
           bacterium HTCC2150]
          Length = 380

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 90/298 (30%), Gaps = 14/298 (4%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
             +  ++  +  + +Q+ I  + A G++ V+ + G + L+     A    +  ++   +G
Sbjct: 83  FDSIFNEARLKIIILQVAIIGIIALGVTQVIITAG-IDLSSGPLVA----ATAMIAMSFG 137

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
            +  +    +         +     +         A +          ++  P      G
Sbjct: 138 QTELVNGFPNPKALFGTWAMDLPVIVPIVAGLAFGAFIGAINGTFIAFLRIPPFI-ATLG 196

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +++  R   L  +  + I F      F+   +      L +        L +R T     
Sbjct: 197 MFLICRGIALWWSGGNPISFPTASYKFIGSGMMPVVWFLSLA---VIFHLIMRYTVYGKH 253

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              I  N++A       +   K+  + ++S     AG   A+  +     M +F E   +
Sbjct: 254 TYAIGSNEEAARMSGINVKRHKVMVYTIASMLAAFAGIVLASKSETAQAGMGEFYELFAI 313

Query: 270 ISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
              VI      GG  S+        +L  +      +       L+            
Sbjct: 314 AMAVIGGISLQGGRGSIIGTVLGAMVLGVIRSGFTYIKLDGSYQLMAMGSIIIAAIVL 371


>gi|15807982|ref|NP_285645.1| urea/short chain-amide ABC transporter permease [Deinococcus
           radiodurans R1]
 gi|6460752|gb|AAF12457.1|AE001863_82 urea/short chain-amide ABC transporter, permease protein
           [Deinococcus radiodurans R1]
          Length = 358

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 52/329 (15%), Positives = 100/329 (30%), Gaps = 36/329 (10%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------- 84
                 Y  ++  ++L   + A G+ +V G  G+LSL   + + +G Y+  +        
Sbjct: 26  PFVLGGYALTLLGRVLALALAALGVCVVWGRAGILSLGQGLFFGLGGYALAMHLKLAATP 85

Query: 85  -----------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
                      G       W     +         + GL +              +    
Sbjct: 86  KGELPDFMLYNGVEKLPWFWQPFHSAPFALLMVVALPGLAAFLIGWLMFRRRITGVFVSI 145

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
               +    +T     +  A  L      +     F         +   +Y+  + +  L
Sbjct: 146 ITQALVLAFVTW----LSGAQGLTSGTNGITDFQTFLGLNMRSDAFARGLYWATVLLLAL 201

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           S +   WL RT   +    +RDN+     L       K++AF +     G++GA +    
Sbjct: 202 SLAGTAWLLRTPFGSLLTAVRDNENRTRFLGYNPAAFKVAAFVLGGVLSGLSGALYTLHL 261

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             ISP M   + +I ++  V LGG  SL   A    +     +              +  
Sbjct: 262 GTISPAMIGVAFSIELVVWVALGGRASLWGAAGGLVLGELAKD--------------RIS 307

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +       +M      V++     +  L
Sbjct: 308 SAAPDAWLYVMGGLFVGVVMFLPQGVAGL 336


>gi|320179867|gb|EFW54811.1| Ribose ABC transport system, permease protein RbsC [Shigella boydii
           ATCC 9905]
          Length = 321

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 89/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                     
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGRVQ--------AFIATLVM 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L+          G         + T        F +        +     ++G+ FL+A
Sbjct: 134 MLLLRGVTMVYTNG-------SPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A       +   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIATVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|225573814|ref|ZP_03782569.1| hypothetical protein RUMHYD_02016 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038842|gb|EEG49088.1| hypothetical protein RUMHYD_02016 [Blautia hydrogenotrophica DSM
           10507]
          Length = 223

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 14/169 (8%)

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
             +         L     +   + L+LRRT    A R+   + +A   +           
Sbjct: 66  GGITISNLQIITLAVAIVMMLGLTLYLRRTRSGKALRSTALDNEAARLMGINTNHVISMT 125

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           FA+ S    + G   AA  D I P M + S      +  ILGG+ ++        ++   
Sbjct: 126 FAIGSGLAAIGGFLVAAQYDAIYPTMSQ-SVGNKAFAAAILGGIGNIPGAMVGGILIGIA 184

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
             L        +   + F             I L LV+L++   ++  +
Sbjct: 185 ESLGATYISSQYRDAVAF-------------IVLILVLLIKPTGIMAKK 220


>gi|22298862|ref|NP_682109.1| branched-chain amino acid ABC transporter permease protein
           [Thermosynechococcus elongatus BP-1]
 gi|22295043|dbj|BAC08871.1| branched-chain amino acid ABC transporter permease protein
           [Thermosynechococcus elongatus BP-1]
          Length = 416

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 53/151 (35%), Gaps = 8/151 (5%)

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
               +      + IR++++   +L   +   K+ +  +  A   +AG+F+A     I+PD
Sbjct: 274 RWIHSPWGRVLKAIREDEEVAKALGKNVFAYKMQSLLLGGAIAAVAGSFYAWQLTFINPD 333

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            F         +IV+LGG  +        A+      L   +                  
Sbjct: 334 GFVSLITFQAWTIVVLGGAGNNMGPLLGAALFWAYTALTRFI--------PLDGGRLEAL 385

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              L+ + L L+++ R   +L  +   +   
Sbjct: 386 RMMLIGLVLILLMMWRPQGILGKKEELSLGR 416



 Score = 48.7 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 1/144 (0%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y+ S+GI    + +F+ GL++  G  GL++   V   AIG+Y+ ++LG       + ++ 
Sbjct: 4   YLISLGIFTATFALFSLGLNLHWGYTGLINFGHVGFLAIGSYTTILLGIAGVPMFFAVLA 63

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
              +++   G +MG+ +L+ R DYLAI T+ M+EI + I +    +T G  G+Y      
Sbjct: 64  -GVVLAMGLGFLMGMATLRLREDYLAIVTIGMAEIVRLIALNEDWLTRGGRGVYGFPLPL 122

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEI 181
                              V+   
Sbjct: 123 AQFNPNIPTKLGMIALFWAVVAGA 146


>gi|83594858|ref|YP_428610.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
 gi|83577772|gb|ABC24323.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
          Length = 454

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/332 (10%), Positives = 85/332 (25%), Gaps = 15/332 (4%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
              ++  + +      +   +    I +Y + A   +++      + L       IGA +
Sbjct: 136 ALAVVAEIPIDLAYFLQQTLNALPVIALYGLLAASYTLIYALGRTILLVFGELAMIGAMA 195

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS-LKFRGDYLAIATLIMSEIFQNILIK 139
                + +     L        +    ++         R   L  A              
Sbjct: 196 CFAGVALFSGLGGLGTAGVVGGAVVFALLASAVHGDALRRLVLQPAAGRTPLALLVASFA 255

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +      +        L T         R     V    F   ++ G   +  +++ 
Sbjct: 256 LAIVVQDYVRLSQDAGDRLLPTLPGRTHVLARAGEFVVAVTDFQLVLVGGAGIVLGALVW 315

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            + R      WR + ++ +       +        FA+++   G+AG          +  
Sbjct: 316 GMGRGRFGRCWRAMAEDPQMATLCGVSKTRLWAICFALAATLAGLAGVVVLLRFGLANAF 375

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           M         ++  ++GG+  +        ++ G+           +  +  F       
Sbjct: 376 M-GAMLGFKALTAAVVGGIGRIQGAILGAVVIGGLETYWAAYFDMAWRDVAVFALLAAAL 434

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                          R   L+ L    + + R
Sbjct: 435 VL-------------RPQGLVGLAERPDRVLR 453


>gi|186472436|ref|YP_001859778.1| monosaccharide-transporting ATPase [Burkholderia phymatum STM815]
 gi|184194768|gb|ACC72732.1| Monosaccharide-transporting ATPase [Burkholderia phymatum STM815]
          Length = 329

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 100/310 (32%), Gaps = 25/310 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +          S + +  +  Q ++  + A G +++V   G + L+C +  A
Sbjct: 27  LIALVIACIFFISQSNRFLSFQNLSLILQQTMVVAVIAIGQTLIV-LTGGIDLSCGMVMA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +G+          G+   + I      S   G++ G+   + +     +    ++  F  
Sbjct: 86  LGSIVMTKFAVVMGVPPVIAIVCGVGASTLFGLLNGVLITRIKLPAFIVTLGTLNIAFAV 145

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             I                      +          F ++F +    + Y  +    +  
Sbjct: 146 TQIY-----------------SNAESVSNLPDAIMFFGNTFNLGPATVTYGTVLTLLMYL 188

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    LR T        + +N +A   +  +     ++ + +S A  G+A A  A SR  
Sbjct: 189 ATWFVLRDTVPGRHLYALGNNPEAARLMGLSAQRILITVYTLSGAIYGIA-ALLAVSRTG 247

Query: 256 ISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           +       +EN+  I+ V+L      GG  S++       I+         M       +
Sbjct: 248 VGDPQAGQTENLDSITAVVLGGTSLFGGRGSIAGTLLGALIVGVFRNGLTLMGVSSVYQV 307

Query: 310 LKFDCSFNMR 319
           L       + 
Sbjct: 308 LITGILVILA 317


>gi|304406601|ref|ZP_07388257.1| inner-membrane translocator [Paenibacillus curdlanolyticus YK9]
 gi|304344659|gb|EFM10497.1| inner-membrane translocator [Paenibacillus curdlanolyticus YK9]
          Length = 339

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/323 (10%), Positives = 98/323 (30%), Gaps = 7/323 (2%)

Query: 3   IFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
           ++ +R     + + ++ ++  + + +      +     ++  Q    ++ A G + V+  
Sbjct: 6   LYKVRTYLAQRAIFVVLILLVIGIAIADPNFLAFSTFINIMQQSSTRLIIALGAAFVL-I 64

Query: 63  LGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
            G   L+      + A     +L      + +        +     + +    L    + 
Sbjct: 65  TGGTDLSSGRVVGLTAVISASMLQIDTYANKFYPDLPHLWVGLPVILGIVAGLLVGLVNG 124

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           L +A L +      +               +          +R+    +      +    
Sbjct: 125 LIVAKLHVPPFIATLGTMVGIYGLNSLYFDMKPNQSQPIGGLRADFMKWGSGYFDLGGGY 184

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            + Y+++    ++A   +   +T +      I  N +A       +    +  +AVS   
Sbjct: 185 TLPYIIIIAIVVAAICWVVFNKTRLGKNMYAIGGNVQAAHVSGINVARNLIIIYAVSGGL 244

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+AG   AA     + +     E   + + V+      GG+ ++  +A    I   +  
Sbjct: 245 YGLAGVLEAARTGGATNNYGNMYELDAIAACVVGGVSTAGGVGTVPGVAAGVLIFGVINY 304

Query: 297 LCCGMNFYYFNSLLKFDCSFNMR 319
               +    +  L+         
Sbjct: 305 GLTFVGVSPYYQLIIKGLIIVAA 327


>gi|288960369|ref|YP_003450709.1| ribose transport system permease protein [Azospirillum sp. B510]
 gi|288912677|dbj|BAI74165.1| ribose transport system permease protein [Azospirillum sp. B510]
          Length = 367

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 113/324 (34%), Gaps = 16/324 (4%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYI-----DSMGIQILIYVMFAWGLSIVVGSL 63
           ++   ++   A +  LL+ + + +  S  ++      ++ +Q+          + V+   
Sbjct: 43  DRRKDLIQKFAALAGLLVLVAVFSLTSDAFLSVGNGMTIALQVTSIAYLGVAATCVI-IT 101

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+     A+       L  + G  + L + +  ++   CG++ GL   + +     
Sbjct: 102 GGIDLSVGSVLALAG-VVAALAVKAGAPLPLGMGLGILVGAFCGLLNGLCVTRLKLPPFI 160

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
            ATL M  + + + ++   IT  +A   + +    LG      I          +    +
Sbjct: 161 -ATLGMMMVARGVALQ---ITGARAVSGLGEAFGELGNGAMFRIVRIGEDGFPDVVFPGI 216

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
            Y ++ M  ++ ++ + L RT +      +  N +A       +    L  + +S    G
Sbjct: 217 PYPVVLMVVIAIAVSVMLSRTTLGRHIYAVGSNAEAARLSGVNVAGVTLFTYVLSGTLAG 276

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           + G    +      P+     E   + S VI     +GG+ ++S  A    ++  +    
Sbjct: 277 LTGCVLMSRLVTAQPNEGVMYELDAIASAVIGGTSLIGGVGTISGTAIGAFVIGILRNGL 336

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTT 322
                  F   +       +    
Sbjct: 337 NMNGVSAFTQQIIIGLVILLTVWI 360


>gi|171058904|ref|YP_001791253.1| monosaccharide-transporting ATPase [Leptothrix cholodnii SP-6]
 gi|170776349|gb|ACB34488.1| Monosaccharide-transporting ATPase [Leptothrix cholodnii SP-6]
          Length = 319

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 49/328 (14%), Positives = 107/328 (32%), Gaps = 24/328 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLG-ATKSQKYIDSMGIQILIYVMFAWGLSIV 59
           M+    +L    ++   +A+     +F        S      +  Q+++  + A G +++
Sbjct: 1   MNTLKDKLPPISQLGPFIALAIACAIFGITTDNFFSGANFSLILQQVMVVGVIAIGQTLI 60

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           + + G + L+C +  A+G+     +   +GL   L I +   ++ A G+I GL   + + 
Sbjct: 61  ILTAG-IDLSCGMVMALGSIVMTKVAEDFGLPAPLAILLGISVTAAFGLINGLLVTRIKL 119

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
               +          NI      + +G   +                       ++F I 
Sbjct: 120 PPFIVTLGTF-----NIAFAVTQLYSGAQTVTQVP------------EMMTWLGNTFRIG 162

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              + Y  + M  L      WLR TA       + +N +A   +        L  + ++ 
Sbjct: 163 GTSVAYGTVFMIALYLGAWFWLRETASGRHVYAVGNNPEATRLVGIPTERVLLWVYVLAG 222

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGV 294
            F G+A     A      P+  +      + ++V     + GG   +        ++  +
Sbjct: 223 VFYGVASLLSVARTGVGDPNAGQTENLDAITAVVLGGTSLFGGRGVILGSLAGAIVVGVL 282

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                 M       +L       +  T 
Sbjct: 283 RNGLTLMGVSSVYQVLITGILVIVAVTV 310


>gi|326382668|ref|ZP_08204359.1| branched-chain amino acid abc transporter integral membrane subunit
           [Gordonia neofelifaecis NRRL B-59395]
 gi|326198787|gb|EGD55970.1| branched-chain amino acid abc transporter integral membrane subunit
           [Gordonia neofelifaecis NRRL B-59395]
          Length = 285

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 88/300 (29%), Gaps = 28/300 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                +YV+ A G +IV  S    +        +G +        + L  W+   V+ ++
Sbjct: 8   LALGAVYVLVAVGYNIVFVSSNTFNFAQAQLMMVGTFVAYTCLVTWKLPAWVAALVAGVV 67

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 +  L +   R        L+ +     +L     +  G               T
Sbjct: 68  VMVLAAVEDLIA--VRPVRDPHNQLVTTLGVATLLNGATQLIWG-----------NEPLT 114

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           V  L               +   +L+    +  ++  + +RT    A   + ++++A   
Sbjct: 115 VPFLGSDDPIEIFGGGTYGYEIALLVLAIVIVIALGQFSKRTMTGLALMGVSEDREAAML 174

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
               +    + AFA S    G+ G F       +       +  +     + +GG  SL 
Sbjct: 175 RGVNVRRLAVGAFAFSGFLAGVLGIFVGPKTYAV--ATLGAALALKGFVALAIGGFGSLP 232

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  ++  V           +++               +   L +V++++   L   
Sbjct: 233 GALIGGLVVGVVEAYTALWFGSQYSN-------------IAIFAVLLIVLMVKPAGLFGR 279


>gi|239627651|ref|ZP_04670682.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239517797|gb|EEQ57663.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47FAA]
          Length = 321

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 103/315 (32%), Gaps = 28/315 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    ++  +L  +F     S   I ++  QI    + A G+++V+   G + L+     
Sbjct: 22  IYFAFIIMCILFAVFNPVFLSLGNIMNIVRQISFNAILAMGMTMVI-ITGGIDLSVGSVL 80

Query: 75  AIGAYSYV--ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           AI A      I  +   L +   + +  +I   CG+  G+   K +     +  ++M+  
Sbjct: 81  AIAAVVSASFIKSASPILPMPSALLIGLLIGAVCGLFNGVFVTKGKLPPFIVTMVMMT-- 138

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
                     I  G A ++   R         + +        F+   + +Y +L+ +  
Sbjct: 139 ----------IARGAAQLFTKGRPVSGLLPEFTYL----GAGFFLGIPVPIYILLVVVAV 184

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               +      T +      +  N+ A  +    +   KL A+  S     + G    A 
Sbjct: 185 SHFIL----NNTRLGRYIYAVGGNEMAAEASGIKVHRIKLFAYIYSGILAALVGMILTAR 240

Query: 253 RDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +  SP +    E   + + VI      GG   +  +     I+  +      +N   + 
Sbjct: 241 LNSASPVVGSGYELDAIAASVIGGTSMEGGRGKVIGVLVGALIIGTISNGLDILNVSSYW 300

Query: 308 SLLKFDCSFNMRHTT 322
             +       +    
Sbjct: 301 QQIVKGLIILVAVLI 315


>gi|107022488|ref|YP_620815.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054]
 gi|116689437|ref|YP_835060.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
 gi|105892677|gb|ABF75842.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116647526|gb|ABK08167.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 409

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 54/301 (17%), Positives = 102/301 (33%), Gaps = 12/301 (3%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +   +                    +     Q    V+ A   ++ +G+ GLLS    
Sbjct: 4   RALAGCMRWALFAACVALPAWLWPHGAVLGYLAQTAALVVLALSYNLQLGTTGLLSFGHA 63

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               +GA++     +  G  + LL  V  M     G + GL + +  G   A+ TL + E
Sbjct: 64  AFAGLGAFAAAHWFNHIGGPLPLLPLVGGMAGAGFGFVAGLLATRRSGTAFAMITLGLGE 123

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                         G  G+ +                   + + +       Y V+   C
Sbjct: 124 CVAAAAWSVPAWFGGIGGVSI------------DRASGAPWGNGYFGAPAHAYAVIAAWC 171

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +SA+ +  L RT ++     +RDN     +L T     +L+    +S F G+AG     
Sbjct: 172 VVSAAAMHVLTRTPLARLANAVRDNPARVAALGTDPRRVRLAMVTCASFFAGVAGTLTLI 231

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
             +  +PD    + +  V+   ++GG  +    A   A+L  +     G++  +   L  
Sbjct: 232 DVELATPDSVSMARSATVLIAAVIGGTGAFFGPAAGAAVLTALSIGVAGVSRAWALYLGV 291

Query: 312 F 312
            
Sbjct: 292 L 292


>gi|320160698|ref|YP_004173922.1| branched-chain amino acid ABC transporter permease protein
           [Anaerolinea thermophila UNI-1]
 gi|319994551|dbj|BAJ63322.1| branched-chain amino acid ABC transporter permease protein
           [Anaerolinea thermophila UNI-1]
          Length = 417

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 56/328 (17%), Positives = 115/328 (35%), Gaps = 35/328 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    VV      L L     +           IY++ A GL+ +      +S+  + A 
Sbjct: 95  VLFFTVVLVGAAILILYRVFGKIRGVDPLSAFAIYLIAAIGLTALA-----VSIGNITAP 149

Query: 75  AIGAYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            +     V+  +     ++L  + +  +++     + GLP L    DY  IATL  + I 
Sbjct: 150 GVNGLLKVLPANIANTVVYLLAVIIGGVLAAEVSFLFGLPVLTLGSDYFGIATLGFTIIV 209

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           + +L     +                       +          I ++  +  ++    L
Sbjct: 210 KVLLDNSDVMFG--------------------FVEMKGARGMIGIPKLTSWIWVMLFLIL 249

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              I   L  ++   A  ++R+++ A  ++   I   K   F +   F G+AG  +A   
Sbjct: 250 VLVITRNLLHSSYGRAIISVREDEIAAKAMGIDIGHYKTLTFVLGCLFAGLAGGLYAHIN 309

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             + PD F F ++   + IV+ GG+ S++    A      V+E                 
Sbjct: 310 GFLHPDTFNFIKSFDPMIIVVFGGLGSVTGTIFAAFAWQLVLEGILRSI---------LP 360

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
             F      +  + L +++L++ + L  
Sbjct: 361 PGFETWRYVVYPLLLLVMMLLKPNGLFG 388



 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 39/82 (47%)

Query: 7  RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
          R+++   I     V + L++ + +       + +++  Q  +  + + GL+++ G  G  
Sbjct: 3  RISRTTLIFLGSIVAFTLVVQVLISLNVLSPFWNTILRQGAVMAIVSLGLNLIYGFNGQF 62

Query: 67 SLNCVIAYAIGAYSYVILGSRY 88
          SL     YAIGAYS   +  R+
Sbjct: 63 SLGQWGFYAIGAYSAADITYRW 84


>gi|194289446|ref|YP_002005353.1| branched-chain amino acid ABC transporter [Cupriavidus taiwanensis
           LMG 19424]
 gi|193223281|emb|CAQ69286.1| putative ABC-type branched-chain amino acid transport systems,
           membrane component [Cupriavidus taiwanensis LMG 19424]
          Length = 288

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 112/301 (37%), Gaps = 26/301 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL+++ G +G+++L     Y +GAY      +    ++++ IP+ 
Sbjct: 11  LNSVQYGLLLFLVASGLTLIFGIMGVINLAHGSFYMLGAYL-AFTLAGLTGNLFIAIPLG 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++ A G ++      +  +   +  ++M+     +  + + I  G             
Sbjct: 70  IVLAVAFGYVLEWAFFSYLYERDHLQQVLMTYGLILVFEELRSILVGDDVH--------- 120

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G  V +L+       + + Y ++  ++      ++ ++   +RRT +    R    N++ 
Sbjct: 121 GVQVPALLDGALPIGNDMTYPVYRLFISAVCLVVALAMYYVIRRTRLGMMIRAGATNREM 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             SL   I       FA+  A   +AG   A                I+   +V++GG+ 
Sbjct: 181 VQSLGINITVLYRFVFALGVALAVLAGMIAAPVSSV--YPGMGAQVLIVCFVVVVIGGIG 238

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A+ +L  V                     +      L+ + + +++L +   L
Sbjct: 239 SVKGALVASLLLGFVDTFGKVF--------------WQEAAGVLIYLLMAVILLWKPQGL 284

Query: 340 L 340
            
Sbjct: 285 F 285


>gi|126459460|ref|YP_001055738.1| inner-membrane translocator [Pyrobaculum calidifontis JCM 11548]
 gi|126249181|gb|ABO08272.1| inner-membrane translocator [Pyrobaculum calidifontis JCM 11548]
          Length = 321

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 111/324 (34%), Gaps = 31/324 (9%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           +  L +                  ++     ++I VG  G +        A+GAY   I+
Sbjct: 9   IYLLLIAVAVLYPEYSKAVATFAFFMALGQAVNIFVGLTGYVDFGYAAFLAMGAYGLGIV 68

Query: 85  GSRYGLSIWLLIPVSAMI----SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
              +       +P+  ++    + A    +G  +L+ RG Y AIAT+ ++E  ++++I  
Sbjct: 69  VYYWPQLGIYALPMGLLLGVFMAAALATAVGGIALRLRGAYFAIATIGVNEGLKHLIIGA 128

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
                G                  S+ + F   ++  +  +    +++    ++   +  
Sbjct: 129 NIWGGGA-----------GLILGTSMFKAFGRDTALFLANVGSTTLVIATGLIAVVAMYL 177

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF--AASRDRISP 258
           ++ +    A   +R ++ A   +       KL AF  S++  G+ GA      +      
Sbjct: 178 IQASKAGLALAAVRQDEDAAKVMGINPTKYKLLAFITSASLSGLLGAAHFPLGNMQIFPE 237

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           ++F     +  +++V LGG  +++       I + V  L                     
Sbjct: 238 NVFFIEYILDGLAVVFLGGAGTVTGPIVGGLIYVLVRNLVGLFAPG-------------- 283

Query: 319 RHTTLMVIALFLVILMRSHSLLRL 342
                  + L  V+++    ++  
Sbjct: 284 YQVLATALLLMAVVILMPKGIVGT 307


>gi|313680105|ref|YP_004057844.1| amino acid/amide ABC transporter membrane protein 1, haat family
           [Oceanithermus profundus DSM 14977]
 gi|313152820|gb|ADR36671.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Oceanithermus profundus DSM 14977]
          Length = 297

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 101/306 (33%), Gaps = 20/306 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +   +Y + A G  ++  +  +++       AIGA++   L +  GLS+W+   +
Sbjct: 8   LVSGIVVGSVYALAALGFVLIYKASRVINFAHGHFIAIGAFTAYALATSLGLSVWIAAAL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   +   G       LK       I+ ++++    ++      +T   +G +       
Sbjct: 68  ALAFTAVVGYFTERVFLKPLVGQPIISVIMVTIGLASVFGGLIHLTPYGSGNFSLP---- 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +       + +         ++      A+   + +R+ +  A R + D+Q 
Sbjct: 124 ------GFLPEGGVSFAGISVSYPQLLAVVFTAVFLAAFGWFFQRSTVGIAMRAVADDQM 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL  ++      A+A +      AG    A        +        V  +VILGG+
Sbjct: 178 ASMSLGVSVEKVFALAWAAAGITAAAAGLIVGAISGLNLEGLVGIGL--KVFPVVILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +  L  G    Y       D    +    ++          + H 
Sbjct: 236 DSIPGAVVGGIIIGILENLAAGYLDAYIPGGGTGDVFPFLVLLLVL--------WFKPHG 287

Query: 339 LLRLRT 344
           L     
Sbjct: 288 LFGTEE 293


>gi|304397996|ref|ZP_07379871.1| inner-membrane translocator [Pantoea sp. aB]
 gi|304354282|gb|EFM18654.1| inner-membrane translocator [Pantoea sp. aB]
          Length = 323

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 92/312 (29%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 24  LIALMVLIAVVASQSPNFFTVANLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L      ++  +    A+ +   G+   + +                + F  
Sbjct: 83  LTGAVGASLVGMEVNALVAVAASLALGAAIGGLTGTIVAR------------GKVQAFIA 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +    L+ +F      +   + +   +  M  +  
Sbjct: 131 TLVMMLLLRGVTMVYTDGSPINTGFSANADLLGWFG-----IGRPLGIPAPVWLMALVFI 185

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L+ T +      +  N+ A       +   K+  +++S     +AG    A    
Sbjct: 186 AAWYMLQHTRLGRYIYALGGNEAATRLSGINVNRVKIIVYSLSGMLAALAGTIEVARLSS 245

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      M    +  ++
Sbjct: 246 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIFGTLIGALILGFLNNGLNLMGVSSYYQMI 305

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 306 VKAVVILLAVLV 317


>gi|126731598|ref|ZP_01747403.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Sagittula stellata E-37]
 gi|126707764|gb|EBA06825.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Sagittula stellata E-37]
          Length = 277

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 46/295 (15%), Positives = 95/295 (32%), Gaps = 23/295 (7%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           + + + A GL+ V G L +L+L     + +GAY    +G  +  SIW+ + V+ + + A 
Sbjct: 1   MAFFLVAAGLTWVFGILKILNLAHGAFFMLGAYISYTIGGAWPGSIWIYLGVAVIAAAAV 60

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G +  L               +    +   LI    +     GI            +   
Sbjct: 61  GALGFLTDQIV-------LKRLRDVDYHYALIATFGLMLFCEGIAKLIWGADYYAVMPPP 113

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
              +          ++  +V+     + A + L + RT      R + ++     ++   
Sbjct: 114 ELDWPVQIGGTYISVYTLFVIATGLVVFAVLELIMNRTWAGKIMRAVSNDPWMAGTVGIN 173

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +    ++A   S A  G AG     ++         F         V++GG+ S+     
Sbjct: 174 VPMVLMAAVMASFALAGFAGGILVPNQALSPHVGASFILY--AFMAVVIGGLGSIRGTFI 231

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           A  +L  V                             + I L + ++ + + L  
Sbjct: 232 ACILLGIVESANATF--------------MAQYGGIAIFIMLAVFLIWKPNGLFP 272


>gi|91778709|ref|YP_553917.1| ABC sugar transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91691369|gb|ABE34567.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia xenovorans LB400]
          Length = 333

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/316 (11%), Positives = 83/316 (26%), Gaps = 26/316 (8%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           ++   +    A++  +  F       S     ++G Q  +  + A G++ V+     + L
Sbjct: 33  DRPYALYAAFAILLVVFSFA-SPWFLSIDNFLNIGRQTALVSIIAIGMTFVI-IARQIDL 90

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+   S  +  +  G +  +            G I G+ + +            
Sbjct: 91  SVGSTLALSGMSAALAMTYLGNNWVIGALAGIGTGAIVGAINGIVTTRVNIPSF------ 144

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                         +T G         L    T    +                +   ++
Sbjct: 145 -------------LVTLGTLSAARGLALMVTTTKPVIIDNDSFIAIFGEGDIFGVPVPII 191

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
                  + IL L  +           N  A              AF ++    G+A   
Sbjct: 192 WTVLAVIAGILLLHYSVFGRQIYAAGGNPTAALYSGINTRRVTTLAFILTGMLAGLAALV 251

Query: 249 FAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNF 303
            +A      PD+ +  E  ++ S+      + GG   +      + I+  +      +  
Sbjct: 252 LSARSHAARPDVVQGMELDVIASVTLGGCSLFGGRGFVLGTLLGSLIIGTLNNGLVLLGV 311

Query: 304 YYFNSLLKFDCSFNMR 319
                L+         
Sbjct: 312 SSSLQLVIKGVIIVAA 327


>gi|313673781|ref|YP_004051892.1| amino acid/amide abc transporter membrane protein 1, haat family
           [Calditerrivibrio nitroreducens DSM 19672]
 gi|312940537|gb|ADR19729.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Calditerrivibrio nitroreducens DSM 19672]
          Length = 294

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 99/304 (32%), Gaps = 23/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   IY + A G +++  S G+++        +GAY  + L   Y +       +
Sbjct: 8   IIAGIVIGSIYSLVALGFTLIYKSTGIVNFAQGELLLVGAYICLHLTVSYQIPFIFSFLI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G  +    L+       I+ ++++    ++L     I  G            
Sbjct: 68  TLIFMFFFGFFIERVFLRRMIGEPIISIIMLTIGLSSLLKSIVQIIWGTD---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T   +         F+       + L+ +         + + T    A R +  +Q+
Sbjct: 118 -TRTFPEIFSHEPVKIGFLNISTVYIFALISIAIFLGIFSYFFKTTKTGVAMRAVASDQQ 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +      ++A+++    + G          +         + V  +VILGG+
Sbjct: 177 AALSMGIDVRKIFALSWAIAAIVSTVGGVLLGNINGINTSLSQ---FGLKVFPVVILGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +  +  G                         +A+ +++L++ + 
Sbjct: 234 DSIMGAIVGGIIIGVLENIVGGYIDPLLGGG---------AKEVFPFVAMIIILLIKPYG 284

Query: 339 LLRL 342
           L   
Sbjct: 285 LFGT 288


>gi|226305048|ref|YP_002765006.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|229490176|ref|ZP_04384023.1| urea ABC transporter, permease protein UrtB [Rhodococcus
           erythropolis SK121]
 gi|226184163|dbj|BAH32267.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
 gi|229322924|gb|EEN88698.1| urea ABC transporter, permease protein UrtB [Rhodococcus
           erythropolis SK121]
          Length = 294

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/292 (11%), Positives = 92/292 (31%), Gaps = 29/292 (9%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILG---SRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
             G +G++++        G+Y+  ++    S    S+ + + V  ++ G  G+++ +  +
Sbjct: 28  TFGQMGVINMAHGEFIMAGSYTAYVVQQVISNATGSLIISLLVGFVVGGLMGVVLEVVLV 87

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                      L+   +   +    + I    A    A                      
Sbjct: 88  SRMYHRPLDTLLVTFGVGLILQQLARDIFGAPAVNVSAP-----------SWLSGGVDIF 136

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
             +      ++L+       ++ + L+++++    R +  N+    +   +     ++ F
Sbjct: 137 GAVVPKTRIFILVLAIAAVIALSVALKQSSMGRRIRAVVQNRDLAETSGISSRRTDITTF 196

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            + S   G+AG   A +    +      S  I    +V++GG+  +     A   L  + 
Sbjct: 197 FLGSGLAGVAGV--ALTLIGSTSPTIGQSYLIDAFLVVVVGGLGQMKGAVIAAFALGILN 254

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                        ++ F                   + +R   L  ++T S 
Sbjct: 255 SFIEYSTTASIAKVIVFVIIVVF-------------LQVRPQGLFAVKTRSL 293


>gi|229917241|ref|YP_002885887.1| inner-membrane translocator [Exiguobacterium sp. AT1b]
 gi|229468670|gb|ACQ70442.1| inner-membrane translocator [Exiguobacterium sp. AT1b]
          Length = 321

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 97/312 (31%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               +V  +++        S   I ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 24  LFGLLVIVVVVTALEPGFLSLNNIFNVLRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     +      ++  +     +I+GA         + +      IATL    I++ 
Sbjct: 83  LASALVAGMMVDGQHAVMAVAL--GLIAGAVLGAFNGAVITYGKVAPFIATLATMTIYRG 140

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y   +    L M     
Sbjct: 141 LTL-----------------VYTDGRPITGLGNSGWFEMLGRGYFWIIPVPALTMLLAFG 183

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A   +   +   K+  +++S     +AG    +  + 
Sbjct: 184 VLYFILKKTTFGRHTYAIGGNEEAAKLMGIGVNKVKIMIYSLSGMLAALAGIILTSRLNS 243

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F  L+
Sbjct: 244 AQPTAGTSYELDAIAAVVLGGTSLAGGRGWIVGTLIGALIIGTLNNGLNLLGVSSFFQLV 303

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 304 VKGAVILFAVLL 315


>gi|86748698|ref|YP_485194.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86571726|gb|ABD06283.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 315

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 49/318 (15%), Positives = 104/318 (32%), Gaps = 26/318 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +  ++  + A GL+++   LG+L+      Y +GA+    +   +    W  +  +
Sbjct: 10  LNGVLYGMLLFLMASGLTVIFSMLGVLNFAHASFYMLGAFFGFQISRWF--GFWPALIFA 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++GA G  +    L+       +A L+ +      + +   I  GK  +         
Sbjct: 68  PLLAGAIGAAVERFGLRRVHRNGHVAELLFTFGLAFAIEEIVSIIWGKVPVDFRPPAL-- 125

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                  + F  F      Y  +  ++L     +   ++L L+RT I    +    +   
Sbjct: 126 -------LDFPAFTIFSTNYPAYKMFMLAISIVIFIGLLLVLKRTRIGLIVQAALTHPHM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L   +    +  F V +A   +AG     S    S         + V+ +V    + 
Sbjct: 179 VGHLGHNVERIFMLVFGVGTALAAVAGVIAGPSLVTQSNMAAMLGPILFVVVVVGG--LG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT-------------TLMVI 326
           SL     A+ ++  V      +N    +                            +  +
Sbjct: 237 SLPGAFIASLLIGLVQTFAVSVNGSLASVFGPLGPDLAQSWLSDIWNVTIAQIAPIMPYL 296

Query: 327 ALFLVILMRSHSLLRLRT 344
            L L+++ R   LL  R 
Sbjct: 297 LLVLILIFRPMGLLGTRE 314


>gi|73541024|ref|YP_295544.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72118437|gb|AAZ60700.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 288

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 46/301 (15%), Positives = 103/301 (34%), Gaps = 26/301 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL+++ G +G+++L     Y +GAY    L S  G  +  +    
Sbjct: 11  LNSVQYGLLLFLVASGLTLIFGIMGVINLAHGSFYMLGAYLAFTLASLTGNLLIAVPLGI 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +      ++               + L   +  Q +L+ +  I   +    +       
Sbjct: 71  VLAVAFGYVLEWAF----------FSFLYERDHLQQVLMTYGLILVFEELRSILVGDDVH 120

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G ++ + +       + + Y ++   +      ++A +   +RRT +    R    N++ 
Sbjct: 121 GVSIPAFLDGALPIGNDMTYPVYRLCISAVCLLVAAGMYYVIRRTRLGMMIRAGATNREM 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             SL   +       FA+  A   +AG   A                I+   +V++GG+ 
Sbjct: 181 VQSLGINVTVLYRVVFALGVALAVLAGMIAAPVSSV--YPGMGAQVLIVCFVVVVIGGIG 238

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A+ +L  V                     +      L+ + + L++L +   L
Sbjct: 239 SVKGALVASLLLGFVDTFGKVF--------------WQEASGVLIYLLMALILLWKPQGL 284

Query: 340 L 340
            
Sbjct: 285 F 285


>gi|152977770|ref|YP_001343399.1| monosaccharide-transporting ATPase [Actinobacillus succinogenes
           130Z]
 gi|150839493|gb|ABR73464.1| Monosaccharide-transporting ATPase [Actinobacillus succinogenes
           130Z]
          Length = 342

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/325 (12%), Positives = 100/325 (30%), Gaps = 8/325 (2%)

Query: 3   IFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
           +FSL+       + L+ +   + +     A  S   I ++ +Q+ +  + + G++ V+  
Sbjct: 1   MFSLKKVISKLGIGLVLLFMIIGMSFTSEAFLSTNNIFNILLQVSVICVISVGMTYVI-L 59

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G + L+     A+ A    +        +       A+       I G   +     Y+
Sbjct: 60  TGGIDLSVGSIVALSAVCLGLFTHWGVAWLGENPSQGALWGVMVLSIAGAVLVGALCGYV 119

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
             A ++  ++     I    +     G+ +              +RFF      V     
Sbjct: 120 NGAIIVYGKVTS--FITTLGMMGIARGLALTLSNGKTIYNFPEQLRFFGNGRLAVTESFS 177

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +   ++    +       L +T        +  N++A       +   ++  + ++ A  
Sbjct: 178 IPIPVIIALIVVLISFYVLTQTVFGRQIYALGGNREAVRLSGINVNKLEIRTYVINGALA 237

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVEL 297
            +         +   P      E   + + VI     +GG+ S+   +    I+  +   
Sbjct: 238 AVGAVILVGRLNAAQPIAGTGYELDAIAATVIGGTSLMGGVGSVVSTSIGALIMGVLQNG 297

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTT 322
              +N   +   L       +    
Sbjct: 298 LTLLNVTSYLQRLIIGMVIILAVFL 322


>gi|295095376|emb|CBK84466.1| ribose ABC transporter membrane protein [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 321

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 97/313 (30%), Gaps = 25/313 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTMSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  I-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           + GA +  I+G      + +   ++A  +      + +   + +     +  +++     
Sbjct: 82  LTGAIAASIVGIEVNALVAVAAALAAGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVT 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +     PI  G                       F +        +     ++ + FL+
Sbjct: 142 MVYTNGSPINTG----------------FTDNADLFGWFGIGRPLGVPTPVWIMAIVFLA 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +L   R  +      +  N+ A      ++   K+  +++      +AG    A   
Sbjct: 186 AWYMLHHTR--LGRYIYALGGNEAATRLSGISVNKVKIIVYSLCGLLASLAGIIEVARLS 243

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++V     + GG   +        IL  +      +    +  +
Sbjct: 244 SAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQM 303

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 304 IVKAVVILLAVLV 316


>gi|224369600|ref|YP_002603764.1| LivH4 [Desulfobacterium autotrophicum HRM2]
 gi|223692317|gb|ACN15600.1| LivH4 [Desulfobacterium autotrophicum HRM2]
          Length = 304

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 92/306 (30%), Gaps = 15/306 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           + + +       Y + + G S+V G L L +      + +G Y      +   L+++  I
Sbjct: 6   QNLINALQWGSFYAVISIGYSMVYGVLMLFNFAHGDIFMVGTYI-GFGVATLFLTLFSAI 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +I     +I    +         +    +    +        +            L
Sbjct: 65  MPGWLIFIFTVVITMFLASFVGVFVEVVGYRPLRGAPRASAAITGLMIGIIFETGNLIIL 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                +   LI    +    +        +++    L   + L++++T    A R +  +
Sbjct: 125 GAKRFSFPPLIESITYNFGGIYVTNVKVMIVVISLLLMLGLHLFIQKTKWGMAMRAMSYD 184

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             A   +  +I       FA+ +    +AG  +  +   + P M             ILG
Sbjct: 185 FLAVPLMGVSINVIAPLTFAIGAGLASVAGILYGQAYPVLDPYM-GILIGWKAFVAAILG 243

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  S+   A A  +L  +      +    F  L+ +               + +++  R 
Sbjct: 244 GRGSIMGAALAGYMLGFIEIFVAMIFPSTFRDLIAYS-------------IILVILTFRP 290

Query: 337 HSLLRL 342
                +
Sbjct: 291 RGFFGM 296


>gi|13475975|ref|NP_107545.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14026735|dbj|BAB53331.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 302

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/317 (12%), Positives = 91/317 (28%), Gaps = 20/317 (6%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY-----VILGSRY 88
            S +++    +   +  + A G+++    L   +       A G Y+       I  +  
Sbjct: 1   MSLQFVVDGLLTGSMIGLGAIGVTLTYSILRFSNFAHGDFMAWGTYATLAVVSAIGATFG 60

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            ++    +     +  A  + M   +L        + + + S+    I++      +   
Sbjct: 61  KVAPIAPLSFGWPLLVALVVGMAFTALLALLLDRVLFSRLRSQGQAIIVVMASFGASMAL 120

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
              +        T     I+        +        +LL    L   + L + RT    
Sbjct: 121 RSLLEFTFSSRPTYFSRAIQIAMPVGFGIRVTPDQIALLLLTTVLVLGVHLLMTRTQTGR 180

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           A + +  N      +   +       + +  A   +AG                F   + 
Sbjct: 181 AMQALSQNAALARIVGIDVASVVRVTWIIGGALACVAGVMIGILVQI--RPFMGFDMLLP 238

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           + +  ILGG+ S+        I+         +    + + + F             I L
Sbjct: 239 MFAAAILGGIGSIPGAVLGGLIIGLAEAGAVQLIGAEWRAAVSF-------------IIL 285

Query: 329 FLVILMRSHSLLRLRTP 345
             V+ +R   L  +R  
Sbjct: 286 MAVLFVRPIGLFGVRER 302


>gi|310642572|ref|YP_003947330.1| ribose abc transporter permease protein [Paenibacillus polymyxa
           SC2]
 gi|309247522|gb|ADO57089.1| Probable ribose ABC transporter permease protein [Paenibacillus
           polymyxa SC2]
          Length = 328

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 95/322 (29%), Gaps = 13/322 (4%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +     ++ +         L    +   +  +   I I    A G+++ +   G   L+ 
Sbjct: 10  FRYGAVVVIIGVLAFFSATLPYFWTYDNLMDILGSIAIVTFVAIGVTLSLIVDG-FDLSV 68

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               ++       L   Y   + ++I V+ ++    G++  L  +K R   L        
Sbjct: 69  GATVSLTTVVSASLMVWYEQPVAVVIIVALVVGALVGLLNSLLIIKLRIPDLLAT----- 123

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                + I          G  + + + F   +         F        + +   ++ +
Sbjct: 124 --LAIMYIVSGVHQTYAQGYTIYNHMQFPDGSKAPGEISPAFLLLGQGKWLGIPISVILL 181

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
               A++ ++L  T           N++A       +   +  A+  S  F  +AG  +A
Sbjct: 182 LLAVAAVHVFLIYTKHGRQMYVTGGNEEAARLSGIRVKKVRTLAYIASGVFAAIAGILYA 241

Query: 251 ASRDRISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           +       D         V ++     V   G  ++        ++  +V     MN  Y
Sbjct: 242 SRVGSGQIDAGSPLLMEAVAAVFVGFSVFGAGKPNVIGTFIGAVLIGVLVNGLTMMNVQY 301

Query: 306 FNSLLKFDCSFNMRHTTLMVIA 327
           F   +       +       + 
Sbjct: 302 FAHDIVKGVVLVLALAVTFYVL 323


>gi|296534600|ref|ZP_06897012.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Roseomonas cervicalis
           ATCC 49957]
 gi|296265087|gb|EFH11300.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Roseomonas cervicalis
           ATCC 49957]
          Length = 317

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 88/301 (29%), Gaps = 25/301 (8%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
              GL ++ G + +++        +  Y+ +   +           ++ +++ A   +  
Sbjct: 27  MCAGLGLIFGIMRVINFAQGDFMMLAMYTGLAGVALLAPGRSWAFAIAMLVACAAAALFY 86

Query: 112 LPSLKFRGDYLAIATLI----------MSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
                     ++  +              ++   + +       G      +        
Sbjct: 87  GIGAATHWALVSRVSGARAIGTADAGHTGQLILTLGLSLVLQNGGLMLFGSSPVSIPNEA 146

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
             RS    F      +       +  +        +IL + R+ I    R + +N  A  
Sbjct: 147 ATRSWTMEFAGGDVMLFINQARAWSAVMAVAAVLLVILLMARSGIGRQLRAVANNPVAAL 206

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
            +   +  A  +AF +  A   +AG   A            F   II+ + V+LGGM S+
Sbjct: 207 YMGIHVDRAFRTAFGIGLALTAVAGVCVATFYPF--QAYTGFDFVIIMYAGVVLGGMGSV 264

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   I+  V +L   +      +   F             I    V+L+R   L  
Sbjct: 265 GGAFLGGLIIGLVQQLSNLVLPPQLQNTAVF-------------IVFLAVLLIRPQGLFG 311

Query: 342 L 342
            
Sbjct: 312 R 312


>gi|170742873|ref|YP_001771528.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168197147|gb|ACA19094.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 308

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 67/326 (20%), Positives = 119/326 (36%), Gaps = 37/326 (11%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           LL +    L    +       YI  +      + +F+    ++ G  G ++        +
Sbjct: 10  LLWLSLIGLALAAVLPLWVSGYILGLLTVAYYFGVFSMAWDLLFGFAGEVNFGPTFLIGL 69

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY+  IL         L +   A+ +   G+++ LP+L+ RG Y  + T+    I QN+
Sbjct: 70  GAYTAGILNGDGVSIP-LCLVAGAVAAVIGGLVLALPALRVRGPYFGLTTVTAVLILQNL 128

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           ++ +   T G+ G+ V D +                     +     Y++ LG   +S  
Sbjct: 129 IVVFADTTGGEIGLTVPDVIS--------------------VDAATNYWLALGFMTVSGL 168

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++L +  + +    +    +     +L   +   KL+AF VS+ F G+AGA F       
Sbjct: 169 VLLAIATSPVGLILQASGQDPVEAGALGFNVAKHKLAAFCVSAFFSGLAGALFVFYMGTA 228

Query: 257 SPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           S       S  + VI   +LGG  ++         LI   EL   +              
Sbjct: 229 SVGTLVDVSVGVQVIIGAVLGGRRTILGGVLGALFLITAGELLRPL-------------- 274

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                T ++  A   VIL     LL 
Sbjct: 275 -GALSTFVVSAAALAVILFVPAGLLG 299


>gi|52425665|ref|YP_088802.1| AraH protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307717|gb|AAU38217.1| AraH protein [Mannheimia succiniciproducens MBEL55E]
          Length = 342

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/325 (12%), Positives = 102/325 (31%), Gaps = 8/325 (2%)

Query: 3   IFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
           +FS +       + L+ +   + + L   A  S   I ++ +Q+ +  + + G++ V+  
Sbjct: 1   MFSFKKLISKLGIGLVLLFMIIGMSLTSQAFLSTNNIFNILLQVSVICVISVGMTYVI-L 59

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G + L+     A+ A    +        +       A+++     I+G   +     Y+
Sbjct: 60  TGGIDLSVGSIVALSAVCLGLFTHWGVAWLGENPSQGALLAVVLLSIVGAVLVGALCGYV 119

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
               ++  ++     I    +     G+ +              +RFF      V     
Sbjct: 120 NGVVIVYGKVTS--FITTLGMMGIARGLALTLSDGKTIYNFPEQLRFFGNGRLAVTENFS 177

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +   ++    +       L +T        +  N++A       +   ++  + ++ A  
Sbjct: 178 IPIPVIIALIVVLISFYVLTQTVFGRQIYALGGNREAVRLSGINVNKLEIKTYVINGALA 237

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVEL 297
            +         +   P      E   + + VI     +GG+ S+   +    I+  +   
Sbjct: 238 AVGAVILVGRLNAAQPIAGTGYELDAIAATVIGGTSLMGGVGSVVSTSIGALIMGVLQNG 297

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTT 322
              +N   +   L       +    
Sbjct: 298 LTLLNVTSYLQRLIIGMVIILAVFL 322


>gi|166365326|ref|YP_001657599.1| amino acid ABC-transporter permease protein [Microcystis aeruginosa
           NIES-843]
 gi|166087699|dbj|BAG02407.1| amino acid ABC-transporter permease protein [Microcystis aeruginosa
           NIES-843]
          Length = 317

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 58/308 (18%), Positives = 120/308 (38%), Gaps = 32/308 (10%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---------RYGLSI 92
           + + ++   +    + + +   G LSL     YA+G Y   IL +              +
Sbjct: 11  LIVSMIFGAILGISIYLPL-MAGQLSLATPGFYALGGYVAAILSTKVFTNTGSNYPLNLV 69

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           +L + ++ +I+G   +++G+P L+ RG YLAIAT+   EI + I +  + IT G  GI+ 
Sbjct: 70  FLEMLIAGIIAGILAIVLGIPVLRLRGIYLAIATIAWVEILRIIALNLE-ITGGAVGIFA 128

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
             + +                      ++   ++ L + FL+   +  L    I  A+  
Sbjct: 129 IPQPF--------------------TTQLAYLWLALPLLFLTMLFLYRLENIKIGRAFNA 168

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           IR ++ A  S+     + K+ +F   +    + GA  A   +  +     F  +II ++ 
Sbjct: 169 IRADELAAASMGINPTYHKVLSFTFGAVLAAVVGAVSAHFLNTWNSRQGTFDASIIFLAF 228

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           V++GG  +         +L  + E+   +        +            +  I + L  
Sbjct: 229 VLIGGSRTFVGPVVGGIVLTALPEVLRALGG-MNGLPIWLGNFLRDGRLIIFGILIVLGT 287

Query: 333 LMRSHSLL 340
           +     L+
Sbjct: 288 IFYPQGLI 295


>gi|158422105|ref|YP_001523397.1| branched-chain amino acid ABC transporter permease protein
           [Azorhizobium caulinodans ORS 571]
 gi|158328994|dbj|BAF86479.1| branched-chain amino acid ABC transporter permease protein
           [Azorhizobium caulinodans ORS 571]
          Length = 301

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 98/312 (31%), Gaps = 26/312 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
             +   + I +  +   IY++ A   ++ +G L  L+ +    + +G  +      + G 
Sbjct: 9   APSMLTQQIINGLMLGAIYMLVAVAFTLAIGVLNFLNFSLPGLFMLGGMA-AFGFLKLGW 67

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              +    + +I+    +++   + +          L+ S  F  +L     I  G    
Sbjct: 68  PFLVAAGGALLIAAFVSLLVERLAYRRMQGGDPEVPLVSSLGFLVLLENLVLIRYGSDQQ 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                                     ++  I     L     L A +  +LR T      
Sbjct: 128 AFPALFPD-----------MNLRIGGLVVGIAQMVSLAISLALVAWLSWFLRTTNTGRRI 176

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           RT+ ++++    +   I       F  S+    + G  FA +  ++SP M         +
Sbjct: 177 RTVAESRETALLMGINIQSLVPQLFVASALLAALGGLLFAVNYQQVSPFM-GEGIGFKGV 235

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           + +I+GGM S+        ++     L   +      +               +   L  
Sbjct: 236 AAMIIGGMGSIWGAVIGGLLIGLAEVLSISLIGADVVN-------------ITVYGLLLA 282

Query: 331 VILMRSHSLLRL 342
           ++++R   L   
Sbjct: 283 ILILRPQGLFGR 294


>gi|148827696|ref|YP_001292449.1| ribose ABC transporter permease protein [Haemophilus influenzae
           PittGG]
 gi|148718938|gb|ABR00066.1| ribose ABC transporter permease protein [Haemophilus influenzae
           PittGG]
 gi|301169220|emb|CBW28817.1| D-ribose transporter subunit [Haemophilus influenzae 10810]
          Length = 322

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 88/301 (29%), Gaps = 23/301 (7%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           + +      S   I ++  Q  +  + A G++ V+   G + L+     A+       + 
Sbjct: 30  VSMVNPDFFSVDNILNILRQTSVNAIIAVGMTFVILIAG-IDLSVGSVLALTGAIAASMV 88

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           S       ++  V  + +   G+   + +                + F   L+    +  
Sbjct: 89  SIELPIFLVIPVVLLIGTLLGGISGVIVAK------------GKVQAFIATLVTMTLLRG 136

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                     +    +    L     F S    Y + +   +  M  + A     L+ T 
Sbjct: 137 ITMVYTDGRPITTGFSDNADL-----FASIGTGYVLGIPVPIWIMSIVFAVAWYILKHTP 191

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           I      +  N+ A       +   K+  FAVS     +AG    +      P      E
Sbjct: 192 IGRYIYALGGNEAATQLSGINVNKIKVFVFAVSGFLSALAGLIVTSRLSSAQPTAGVSYE 251

Query: 266 NIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              + ++V+     +GG   +        I+  +      ++   +  ++       +  
Sbjct: 252 LDAIAAVVVGGTSLMGGKGRVMGTLIGALIIGFLNNALNLLDISSYYQMIAKALVILVAV 311

Query: 321 T 321
            
Sbjct: 312 L 312


>gi|86135881|ref|ZP_01054460.1| ABC transporter permease protein [Roseobacter sp. MED193]
 gi|85826755|gb|EAQ46951.1| ABC transporter permease protein [Roseobacter sp. MED193]
          Length = 306

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 103/306 (33%), Gaps = 15/306 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + A GL++V G +GL++L     Y                +  +    
Sbjct: 10  VLNGLQFGVMLFLMAAGLTLVFGVMGLINLAHGALYM----------VGAFAAAAVAGWT 59

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            + +      +    +     +   I  L   +    +L  +  I     G       + 
Sbjct: 60  GSFVLALMASLAAAAAAGALVEVTVIRRLYDRDHLDQVLATFALILIFSEGTRWLFGSFP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   V S +         + Y ++   +++    + A +   + RT I    R    +++
Sbjct: 120 LFLDVPSYLSGPVTLPGGIQYPLYRLAIIVIGLVVGAGLFWLIARTRIGVQIRAGEADRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+
Sbjct: 180 MIAALGVDISKLYTLVFALGAALAGLAGALVGAIQSV--QVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN---MRHTTLMVIALFLVILMR 335
            S+        ++     L        F  +++   + +      + L+ I +  V+L+R
Sbjct: 238 GSIKGALVGALLVGLTDTLGGVFLPRLFALMMEPASAASFGASLASMLIYILMAAVLLVR 297

Query: 336 SHSLLR 341
              L  
Sbjct: 298 PSGLFG 303


>gi|312796326|ref|YP_004029248.1| branched-chain amino acid transport system permease protein livH
           [Burkholderia rhizoxinica HKI 454]
 gi|312168101|emb|CBW75104.1| Branched-chain amino acid transport system permease protein livH
           [Burkholderia rhizoxinica HKI 454]
          Length = 305

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 93/307 (30%), Gaps = 16/307 (5%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     ++  + A GL++V G    ++L     Y IGA+    + +     +   + V 
Sbjct: 11  LNGLQLGILLFLMAAGLTLVFGIANFVNLAHGSLYMIGAFVGAFVYNLTSSFMLATLAVV 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             I      +      +          L    +        + +                
Sbjct: 71  PAIMVVGIALEAGIFRRLYARSHLDQVLATFGLILFFNELARTLWGPSPYYMEVPPSLSD 130

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                            + Y ++   ++     ++ S  + + RT I    R    ++  
Sbjct: 131 A-----------IDVFGINYPVYRLLIVAVGIGIALSCYVVIHRTRIGMLIRAGATHRDI 179

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   +       F V++A  G+AG                    I+ + ++++GG+ 
Sbjct: 180 VAALGVNMGLLNALLFGVAAALAGVAGLLAGPILSV--QSGMGEPVLILTMVVIVIGGIG 237

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLL---KFDCSFNMRHTTLMVIALFLVILMRS 336
           S+     A  I+  V  L   +       LL     D +     + L+ I +  V+  R 
Sbjct: 238 SVRGAFYAALIVGVVDTLGRTLLPVALRELLERSAADSAGPALASMLIYILMAAVLAWRP 297

Query: 337 HSLLRLR 343
             L  ++
Sbjct: 298 QGLFSVK 304


>gi|227113944|ref|ZP_03827600.1| ribose ABC transporter permease protein [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 322

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 95/312 (30%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLILIAVVSAMSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   +         ++  + +  +  +    G   G+   K +      ATL+M  + + 
Sbjct: 82  LTG-AVAASIVGLEVNALVAVFGALALGALIGAGTGVIVSKGKVQAFI-ATLVMMLLLRG 139

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + +   +    G                      F    +   + +   +  M  + A
Sbjct: 140 VTMVYTNGSPVNTGFSDVA---------------DAFGWFGIGRPLGIPTPIWIMAIVFA 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 185 AAWYMLHHTRLGRYIYALGGNESATRLSGISVDKIKIIVYSLCGLLSALAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|268593369|ref|ZP_06127590.1| ribose ABC transporter, permease protein [Providencia rettgeri DSM
           1131]
 gi|291311067|gb|EFE51520.1| ribose ABC transporter, permease protein [Providencia rettgeri DSM
           1131]
          Length = 330

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/313 (13%), Positives = 91/313 (29%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +   +L         S     ++  QI   ++ + G++ ++   G + L+     
Sbjct: 30  LIGALLAMIVLFSCLSTHFLSMNTFSTIANQIPDLIVMSVGMTFILIIAG-IDLSVGSLL 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +    +    WL      M++   G + G  ++ +R       +L M E+ +
Sbjct: 89  ALAAAVVSVTYLNFQWPPWLAALSGVMLATLVGSLTGFITVAWRIPAFI-VSLGMLEMAR 147

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  +         G         +   V                        +    + 
Sbjct: 148 GVAYQLTDSRTAYIGSIYDYIADPVFFGVSPS--------------------FIIAIVVI 187

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L RT        I  N++A           K++ FA+     G+A  F  A  +
Sbjct: 188 IVGHLVLTRTVFGRHLIGIGTNEEAVRLSGINPGPYKIAVFALMGGLSGLASLFQVARLE 247

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +      +        
Sbjct: 248 AADPNSGVGMELQVIAAVVIGGTSLMGGRGSIICTFLGALIISVLAAGLAQVGASEPTKR 307

Query: 310 LKFDCSFNMRHTT 322
                   +    
Sbjct: 308 FITGAVIIVAVVL 320


>gi|145637456|ref|ZP_01793115.1| ribose ABC transporter permease protein [Haemophilus influenzae
           PittHH]
 gi|148825219|ref|YP_001289972.1| ribose ABC transporter permease protein [Haemophilus influenzae
           PittEE]
 gi|319775574|ref|YP_004138062.1| D-ribose transporter subunit [Haemophilus influenzae F3047]
 gi|145269402|gb|EDK09346.1| ribose ABC transporter permease protein [Haemophilus influenzae
           PittHH]
 gi|148715379|gb|ABQ97589.1| ribose ABC transporter permease protein [Haemophilus influenzae
           PittEE]
 gi|317450165|emb|CBY86379.1| D-ribose transporter subunit [Haemophilus influenzae F3047]
          Length = 322

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 88/301 (29%), Gaps = 23/301 (7%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           + +      S   I ++  Q  +  + A G++ V+   G + L+     A+       + 
Sbjct: 30  VSMINPDFFSVDNILNILRQTSVNAIIAVGMTFVILIAG-IDLSVGSVLALTGAIAASMV 88

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           S       ++  V  + +   G+   + +                + F   L+    +  
Sbjct: 89  SIELPIFLVIPVVLLIGTLLGGISGVIVAK------------GKVQAFIATLVTMTLLRG 136

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                     +    +    L     F S    Y + +   +  M  + A     L+ T 
Sbjct: 137 ITMVYTDGRPITTGFSDNADL-----FASIGTGYVLGIPVPIWIMSIVFAVAWYILKHTP 191

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           I      +  N+ A       +   K+  FAVS     +AG    +      P      E
Sbjct: 192 IGRYIYALGGNEAATQLSGINVNKIKVFVFAVSGFLSALAGLIVTSRLSSAQPTAGVSYE 251

Query: 266 NIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              + ++V+     +GG   +        I+  +      ++   +  ++       +  
Sbjct: 252 LDAIAAVVVGGTSLMGGKGRVMGTLIGALIIGFLNNALNLLDISSYYQMIAKALVILVAV 311

Query: 321 T 321
            
Sbjct: 312 L 312


>gi|160898622|ref|YP_001564204.1| monosaccharide-transporting ATPase [Delftia acidovorans SPH-1]
 gi|160364206|gb|ABX35819.1| Monosaccharide-transporting ATPase [Delftia acidovorans SPH-1]
          Length = 348

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/318 (11%), Positives = 97/318 (30%), Gaps = 27/318 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +      +      LL  L   A  +   + ++ +Q+ I  + A+G++ V+  LG +
Sbjct: 42  RSLRRHAGTLMGLAALVLLFSLLSPAFLTGGNLRNVLLQVSIIAIVAFGMTYVL-LLGEI 100

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+      ++  +      +      + +     ++           L + +
Sbjct: 101 DLSVGSVVALAGSVAGLMLGQGLAPALV------LPAVLLCGLLLGALNGSLSALLHLPS 154

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
            I++     I      I +G            +   V +    +     ++   + ++ +
Sbjct: 155 FIVTVATMGIFRGLAYIVSGG-----------MPAPVDNEAFLWIGNGEWLGMPVPIWIL 203

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
              +      +     RT           N +A       +   K++ F +S     + G
Sbjct: 204 AALLAANHFVLA----RTVFGRKIYLAGGNAEAATYAGIRVGRLKIAIFMLSGLMAAVGG 259

Query: 247 AFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
               +      P+     E   + + V     + GG  S++       ++  +      M
Sbjct: 260 LLLTSRLYSAQPNAAMGWELDAIAAAVLGGTRLAGGHGSVAGTLIGALMIGVINNGMNLM 319

Query: 302 NFYYFNSLLKFDCSFNMR 319
           +  YF  L+       + 
Sbjct: 320 SVPYFYQLIVKGSVILVA 337


>gi|311103938|ref|YP_003976791.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310758627|gb|ADP14076.1| inner-membrane translocator 15 [Achromobacter xylosoxidans A8]
          Length = 300

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 89/303 (29%), Gaps = 18/303 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+I+ G L +++      + + A+   I  ++    +   + +
Sbjct: 13  LLVGLINGCFYAILSMGLAIIFGLLNIVNFTHGAQFMMAAFLAWIGFTQLPQLLGPGVQI 72

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   +     ++           L     +        L+    I     G +       
Sbjct: 73  NFWAALIVAPLLVGLVGVVIEKTL--LKRLYHLDHLYGLLLTFGIALMMEGGFRYFYGIS 130

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    F   F+    +  +V++    L  +      RT +    R   +N +
Sbjct: 131 GVGYEPPEILQGGFDLGFMFLPAYRAFVVVASLVLCLATWYLFERTRLGAMLRAGTENPR 190

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +    A  G+AG   A         +   +   IV ++V++GG+
Sbjct: 191 LLQAFGVNVPVMITLTYGFGVALAGVAGVLAAPVMQI--NPLMGSNLLNIVFAVVVIGGL 248

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+                                  +    T ++ I + +V+L R   
Sbjct: 249 GSIMGAIV--------------TGLALGLLEGLTKVFYPEASTVVVFIVMAIVLLTRPAG 294

Query: 339 LLR 341
           L  
Sbjct: 295 LFG 297


>gi|308188698|ref|YP_003932829.1| Ribose transport system permease protein rbsC [Pantoea vagans C9-1]
 gi|308059208|gb|ADO11380.1| Ribose transport system permease protein rbsC [Pantoea vagans C9-1]
          Length = 323

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 91/312 (29%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 24  LIALMVLIAVVASQSPNFFTVANLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L      ++  +    A+ +    +   + +                + F  
Sbjct: 83  LTGAVGASLVGMEVNALVAVAASLALGAAIGALTGTIVAR------------GKVQAFIA 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +    L+ +F      +   + +   +  M  +  
Sbjct: 131 TLVMMLLLRGVTMVYTDGSPINTGFSANADLLGWFG-----IGRPLGIPAPVWLMALVFI 185

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L+ T +      +  N+ A       +   K+  +++S     +AG    A    
Sbjct: 186 AAWYMLQHTRLGRYIYALGGNEAATRLSGINVNRVKIIVYSLSGMLAALAGTIEVARLSS 245

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      M    +  ++
Sbjct: 246 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIFGTLIGALILGFLNNGLNLMGVSSYYQMI 305

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 306 VKAVVILLAVLV 317


>gi|256371577|ref|YP_003109401.1| inner-membrane translocator [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008161|gb|ACU53728.1| inner-membrane translocator [Acidimicrobium ferrooxidans DSM 10331]
          Length = 292

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 92/309 (29%), Gaps = 27/309 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I    +  L Y +FA GL+IV G   +++L       +G ++   L S   +S  L   +
Sbjct: 7   IIGGVLLGLFYALFAMGLNIVFGVQRIINLAHGDVVMLGGFAAWDLYSALHMSPVLAAVI 66

Query: 99  SAMISGACGMIMGLPSLKF--RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                 A G       +    R   +   +L++      ++     I  G          
Sbjct: 67  VLPFGVAVGYGFHRLVVPRLARARDIETMSLVLFFGISQVIEALGAIGFGPN-------- 118

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
               T   + +           Y  +++ V      L    +L+L RT +    R +  +
Sbjct: 119 --ERTLPIAALPSHPIRFLGESYPAYLWIVGAVSLPLLVLFLLYLYRTPLGLETRAVMAD 176

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +   ++           F V  A    AG         +       S  I   +I++ G
Sbjct: 177 AREALAVGIDTRRISAITFGVGIALAAAAGVLAIVVFSGVD-PSEGASLTITAFAIIVFG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
            + +      A      + +L       + N               +  + +   +L+R 
Sbjct: 236 SLGNPIGTIVAGIAFGVLSQLAQVYLPEWSN--------------LVPYVLVLGTMLLRP 281

Query: 337 HSLLRLRTP 345
             L   R  
Sbjct: 282 EGLFGRRAR 290


>gi|168185683|ref|ZP_02620318.1| ribose transport system permease protein RbsC [Clostridium
           botulinum C str. Eklund]
 gi|169296274|gb|EDS78407.1| ribose transport system permease protein RbsC [Clostridium
           botulinum C str. Eklund]
          Length = 330

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 85/312 (27%), Gaps = 26/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  ++  ++L +      + K + ++  Q  I  + A G+ + + + G + L+     A
Sbjct: 29  LLGLILLCIVLAIASPMFLTFKNLMNIARQSAINSIIASGMLLAILTAG-IDLSVGSILA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +      +           ++      +                  L    L+      +
Sbjct: 88  LSTCIMGVAIKAGLNPFLGILLCIGSGAALG---------------LINGLLLTKLHLPH 132

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             I    + N   G+ +        +     + F        I   F+  +++ + +   
Sbjct: 133 PFISTLGMKNVARGLALIITAASPISGFSKSVTFLGGEFLGPIPISFILVIIVFIGYHIF 192

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +TA      ++  N +A       +    +  + +     G+AG       D 
Sbjct: 193 L-----NKTAQGRHIYSVGSNPEAARLSGVNVSRTLVLVYTLCGTMAGLAGLVLVGRVDA 247

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      +   + + +I     +GG  ++        I+  +      +        +
Sbjct: 248 AVPLAGLDFDLDAIAACIIGGASFMGGSGTIWGTLIGAMIISVLRNGLNLLGVSSDLQTV 307

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 308 AIGLVIIGAVYV 319


>gi|258654095|ref|YP_003203251.1| inner-membrane translocator [Nakamurella multipartita DSM 44233]
 gi|258557320|gb|ACV80262.1| inner-membrane translocator [Nakamurella multipartita DSM 44233]
          Length = 367

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/323 (12%), Positives = 92/323 (28%), Gaps = 23/323 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGA--TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
           RL K   +  L  ++   L+F         +   I ++   + I+ +   G++ V+ + G
Sbjct: 29  RLFKLQSVWILCVLIGICLIFSLAAGSKFFAWSNISTITQNVSIWAVLGVGMTFVIITSG 88

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+        +     +    G     +     + + A G+  GL +          
Sbjct: 89  -IDLSIGSVLVFSSVVSAKVMEAIGGDGVGVALAGVVAAVASGICWGLLNGVLIARAKIP 147

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
             ++        L   + IT G     V D L                        + + 
Sbjct: 148 PLIVTLGTLSIALGLAQIITGGLDIRAVPDSLTDTIGC---------------GRFLGIP 192

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            + L    +     + L +T        +  N++A   +   +    +  + ++    G 
Sbjct: 193 MLTLIALIILVIGGIILHKTRFGRYTYAVGSNEEAARRVGVKVSRHLIKVYGMTGMLAGF 252

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCC 299
           AG    A     +      +   ++ ++V     I GG  S+        I   ++    
Sbjct: 253 AGLLSLAQYSTTTIAGQSLTNLNVIAAVVIGGTSIFGGEGSIFGTVVGLFIPAVLLSGFT 312

Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322
            +    +   +            
Sbjct: 313 ILGVTPYWQTVAVGTVLIAAVYV 335


>gi|194016597|ref|ZP_03055211.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Bacillus pumilus ATCC 7061]
 gi|194012070|gb|EDW21638.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Bacillus pumilus ATCC 7061]
          Length = 317

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 100/312 (32%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  ++   ++ +   A      I ++  QI I  + A+G++ V+   G + L+     A
Sbjct: 20  FLGLIILVAIVSILNPAFLEPLNILNLLRQISINALIAFGMTFVI-LTGGIDLSVGAILA 78

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +               L I V  +I    GM+ GL   K +      ATL    IF+ 
Sbjct: 79  LSSALTAGFIVSGMD-PILAIIVGCIIGAILGMVNGLLITKGKMAPFI-ATLATMTIFRG 136

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L   + F      Y + +    + M     
Sbjct: 137 LTL-----------------VYTDGNPITGLGSNYAFQLFGRGYFLGIPVPAITMLLTFI 179

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + + L +T        I  N+KA       +   K+  ++++     +AGA   +  + 
Sbjct: 180 VLWVLLHKTPFGRRTYAIGGNEKAALISGIKVPRVKIMIYSLAGFMSALAGAILTSRLNS 239

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 240 AQPTAGTSYELDAIAAVVLGGTSLSGGRGRIVGTLIGVLIIGVLNNGMNLLGVSSFYQSV 299

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 300 VKGIVILIAVLL 311


>gi|239833433|ref|ZP_04681761.1| ribose ABC transporter permease [Ochrobactrum intermedium LMG 3301]
 gi|239821496|gb|EEQ93065.1| ribose ABC transporter permease [Ochrobactrum intermedium LMG 3301]
          Length = 346

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/309 (10%), Positives = 86/309 (27%), Gaps = 10/309 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +    +         +     +M   + I+ + A G+ ++V   G + L+      +  
Sbjct: 35  LIAIIAVFSFLSPNYFTVNNFLTMSSHVAIFGLLAIGM-LLVILNGGIDLSVGSTLGLAG 93

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
                L     L  + +I    + +           +      +    +    +   +  
Sbjct: 94  VVAGFLMQGVTLQHFGVILYFPVWAVVIITCALGAFVG----AINGVLIAYLRVPAFVAT 149

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                      + + + L +     R  +    F          +   +L +  L+    
Sbjct: 150 LGVLYCARGVALLMTNGLTYNNLGGRPELGNTGFDWLGFNKLFGVQIGVLVLVVLAIICA 209

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L RTA          N++A       +   K+S + +S     +AG   A+      P
Sbjct: 210 IVLNRTAFGRWLYASGGNERAAELSGVPVKRVKVSVYVISGICAAIAGLILASQLTSAGP 269

Query: 259 DMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
                 E   + ++VI      GG  ++        ++  + +    +    +   +   
Sbjct: 270 TAGTTYELTAIAAVVIGGAALTGGRGTIQGTLLGAFVIGFLSDGLVIIGVSSYWQTVFTG 329

Query: 314 CSFNMRHTT 322
               +    
Sbjct: 330 AVIVLAVLL 338


>gi|271966103|ref|YP_003340299.1| inner-membrane translocator [Streptosporangium roseum DSM 43021]
 gi|270509278|gb|ACZ87556.1| inner-membrane translocator [Streptosporangium roseum DSM 43021]
          Length = 292

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 94/306 (30%), Gaps = 24/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        IY   A  L +V  S G+++        +  Y      ++  + I L + +
Sbjct: 7   VIDGMTTGSIYGALALALVLVYRSTGMINFAQGQMAVLSTYL-AWAMTQADVPIVLAVVL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  I+   G  +    ++       + T+I++               G            
Sbjct: 66  AIFIAILVGAGVERLLIRRFEGRDHLTTIIVTVGLLTTFNGVVIWIWGAD---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+ SL          + + +    ++  +  +   +    R T +  A R + DN +
Sbjct: 116 -LKTIPSLFPERDLSVGAMHFTLQDIGIVGVLIAVILVMQALFRGTRLGLALRAVADNPQ 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           +       I    ++ +A++ A   + G   A         +      I  ++  ILGG+
Sbjct: 175 SSALSGLPIGVLLMTGWALAGAVGSLGGVLIAPKISLQPGMLDNVL--IYAVAAAILGGL 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S      A   L     L                         + ++ + +V+L+R   
Sbjct: 233 DSPIGAIVAAWTLGIAQNLAGTY----------IPLVGTDLQIAVPLVIMAVVLLIRPQG 282

Query: 339 LLRLRT 344
           LL  + 
Sbjct: 283 LLGRKE 288


>gi|111222774|ref|YP_713568.1| putative Sulfate-transporting ATPase [Frankia alni ACN14a]
 gi|111150306|emb|CAJ62003.1| putative Sulfate-transporting ATPase [Frankia alni ACN14a]
          Length = 989

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 85/283 (30%), Gaps = 14/283 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-ILGSRYGLSIWLL 95
            ++    +   +Y + A GL +   + G+ +L         AY++  +            
Sbjct: 10  PFVIIGLVSGSVYGLAATGLVLTYKTSGIFNLAHGAVATTAAYTFYFLRVQHGLPWGLAA 69

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +    ++  A G+++ L           +A  +        ++    I     G + A  
Sbjct: 70  LLSVGVVGPALGLLLEL-----------MARRLAEVRVVYKIVATIGIILAVQGFFTARY 118

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                T    L     F  S  +       +       +A + L+ R   +  A R + D
Sbjct: 119 GAQSQTFPTFLPTGSAFTLSGTVVTWDQIIITAIALIATAGLYLFFRFARLGLAMRGVVD 178

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           + +   S  T  +  +  ++ + S F  +AG   A S    +  +              L
Sbjct: 179 DPELLDSAGTNPVAVRRWSWVIGSTFACLAGVLLAPSLSLDALLLTLLVVQ--AFGAAAL 236

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           G  +SL        ++  +  +          + L      + 
Sbjct: 237 GYFSSLPLTYAGGLVVGVLASILTKYGAVTHPNALLTGLPPST 279



 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 106/288 (36%), Gaps = 16/288 (5%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                          L+ V+    L ++V + G +SL      AIGA S     +  GL 
Sbjct: 333 PFLVGSSRIPTYTDALLKVILFLSLGLLVRTSGQVSLAHAAFAAIGAASMGHFTTGLGLP 392

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             + + ++ +++   G ++ +P+++  G +LA+AT       + +    K +        
Sbjct: 393 WLVALLLAGLVAIPVGAVIAIPAIRLSGVFLALATFGFGIALEQMGYPLKILFGSSTSGV 452

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              R                   S    +   YY++L    L A++++ + R+ +    R
Sbjct: 453 RVPRP----------------GLSAFESDRGYYYLVLIFVALVAALVVGVHRSRLGRLLR 496

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            + D+  A  +   ++   ++  F +S+    + G  +  S   ++   F    ++++++
Sbjct: 497 GLSDSPTALATHGASVNTTRVLVFCLSAFVAAIYGGLYGGSVSAVTGSSFSSFSSLVILA 556

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           ++++           A A ++         N   + + L    +  + 
Sbjct: 557 VLVISLGGEPWYAFLAAAGMVLPSAYITNENTTNWLNFLFGVSAIAVS 604


>gi|119357484|ref|YP_912128.1| inner-membrane translocator [Chlorobium phaeobacteroides DSM 266]
 gi|119354833|gb|ABL65704.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Chlorobium phaeobacteroides DSM 266]
          Length = 294

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 87/301 (28%), Gaps = 27/301 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
           G+  + Y + A+G  +   +   ++        +GA++  I  +  GL  W+ +  + + 
Sbjct: 16  GLMGMAYALVAYGFQLTYAAGKAVNFGQGELVMLGAFT-GISLTHIGLPYWVSVIGAMVS 74

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
             A G  +   +++          ++++ I     +       G+  +            
Sbjct: 75  GAALGWFVERVAVRLAFQQRNEGWILLTIIIGLFGVSAAENIWGRDDMPYPAP------- 127

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                       S +        V  G   + A + L  R T    A + +  +  A   
Sbjct: 128 ----WPDTPIDLSGISVTWHELAVAAGALGIMALVELAKRYTMAGIAVQGVSADPDAAEL 183

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                  A   ++ VS    G AG                 +  +   S+ ++ G  S  
Sbjct: 184 CGIRSTSAISLSWVVSGIAAGFAGTIIGPVTTV--GPTMAAALTLKAFSVAVVAGFNSGF 241

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +  A  +L     L   +    +                   + L L ++ R   +   
Sbjct: 242 GLLIAGILLGTTENLSGFVLGSGWRETPGL-------------VLLILALVFRPQGIFGK 288

Query: 343 R 343
           +
Sbjct: 289 K 289


>gi|311109727|ref|YP_003982579.1| inner-membrane translocator 74 [Achromobacter xylosoxidans A8]
 gi|310764416|gb|ADP19864.1| inner-membrane translocator 74 [Achromobacter xylosoxidans A8]
          Length = 304

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 92/309 (29%), Gaps = 16/309 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + A GL++V G +  ++L     Y +GAY   +               
Sbjct: 9   LLNGLQYGVLLFLLAAGLTLVFGIMSFVNLAHGSLYMLGAYFAALTFKNTDSLTLAFFAA 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                    ++  L   +          L+   +        + +               
Sbjct: 69  IFGSIAVGVILERLAVSRLYSRDHLDHVLVTFGMVLFFNEMVQILWG-----------TQ 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             + Y  + + +++    ++      + +T +    R    N K
Sbjct: 118 PYFLPVPAWLDSTVSIFGINYPAYRFAIIVVGLLVAVGAHAVINKTRLGMLIRAGSVNPK 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I F     F + +A  G+AG   +                I  + ++++GG+
Sbjct: 178 MVGALGVNIKFLNALLFGLGAALAGLAGVMASPILSI--QSGMGDPVLITTLVVIVIGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335
            S+S    A  I+  V  L            +  D +        + L+ + + +V+ +R
Sbjct: 236 GSVSGAFYAALIVGVVDTLGRAFLPMILREFMARDIANAAGPAIASMLIYVLMAVVLALR 295

Query: 336 SHSLLRLRT 344
              L   R 
Sbjct: 296 PQGLFGARR 304


>gi|299533355|ref|ZP_07046738.1| UrtA [Comamonas testosteroni S44]
 gi|298718671|gb|EFI59645.1| UrtA [Comamonas testosteroni S44]
          Length = 317

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 53/319 (16%), Positives = 115/319 (36%), Gaps = 27/319 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M + GL+++   +G+L+      Y +GAY          +  W  +  
Sbjct: 10  MLNGVSYGLLLFMLSSGLTLIFSMMGVLNFAHTSFYMLGAYFAY--TLSGIIGFWPALFF 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++ G  G +    SL+    Y  +  L+++     ++++   +  G+  +  A     
Sbjct: 68  SPVLVGVLGALFERYSLRRVHKYGHVPELLVTFGLSYLILEVVQLVWGRGTVPYA----- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + S ++   F      +     +V+L    +  ++ L L RT I    +    N +
Sbjct: 123 ----LPSALQGPLFTLYGTQFPKSRSFVMLVALLMLVAVWLLLTRTRIGLVIQAALKNPE 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    +  F    A  G+AG         ++      S   I+  +V++GGM
Sbjct: 179 MVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NTYVTEPAMAASVGSIIFVVVVVGGM 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFN--------------SLLKFDCSFNMRHTTLM 324
            SL+    A+ ++  V      +++                         + +     L 
Sbjct: 237 GSLAGAFVASLLIGVVQTFAVALDWSLAGLFASMGHQVNESTFGWPVLRLTLSQVAPILP 296

Query: 325 VIALFLVILMRSHSLLRLR 343
            + L L+++ R   LL  R
Sbjct: 297 YLFLVLILIFRPKGLLGTR 315


>gi|237729061|ref|ZP_04559542.1| ribose ABC transporter permease [Citrobacter sp. 30_2]
 gi|226909683|gb|EEH95601.1| ribose ABC transporter permease [Citrobacter sp. 30_2]
          Length = 321

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 91/312 (29%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTMSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                   Q 
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        I     ++G+ FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPVNTGFTDNADLFGWFGIGRPLGIPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGISVSKIKIIVYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|22124153|ref|NP_667576.1| ABC transporter permease [Yersinia pestis KIM 10]
 gi|45443641|ref|NP_995180.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis biovar Microtus str. 91001]
 gi|108809639|ref|YP_653555.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis Antiqua]
 gi|108813695|ref|YP_649462.1| branched-chain amino acid transport system, permease component
           [Yersinia pestis Nepal516]
 gi|145597558|ref|YP_001161634.1| branched-chain amino acid transport system, permease component
           [Yersinia pestis Pestoides F]
 gi|153947385|ref|YP_001399359.1| carbohydrate ABC transporter permease [Yersinia pseudotuberculosis
           IP 31758]
 gi|153997427|ref|ZP_02022527.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis CA88-4125]
 gi|165927546|ref|ZP_02223378.1| carbohydrate uptake (CUT2 family) ABC transporter, permease protein
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165937501|ref|ZP_02226064.1| carbohydrate uptake (CUT2 family) ABC transporter, permease protein
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|166012014|ref|ZP_02232912.1| carbohydrate uptake (CUT2 family) ABC transporter, permease protein
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166214147|ref|ZP_02240182.1| carbohydrate uptake (CUT2 family) ABC transporter, permease protein
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167402021|ref|ZP_02307504.1| carbohydrate uptake (CUT2 family) ABC transporter, permease protein
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167420562|ref|ZP_02312315.1| carbohydrate uptake (CUT2 family) ABC transporter, permease protein
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167425507|ref|ZP_02317260.1| carbohydrate uptake (CUT2 family) ABC transporter, permease protein
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|167468437|ref|ZP_02333141.1| carbohydrate uptake (CUT2 family) ABC transporter, permease protein
           [Yersinia pestis FV-1]
 gi|170022684|ref|YP_001719189.1| monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|218930645|ref|YP_002348520.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis CO92]
 gi|229836778|ref|ZP_04456943.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis Pestoides A]
 gi|229839322|ref|ZP_04459481.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229899886|ref|ZP_04515027.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229904198|ref|ZP_04519309.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis Nepal516]
 gi|270488638|ref|ZP_06205712.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
 gi|294505233|ref|YP_003569295.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis Z176003]
 gi|21956909|gb|AAM83827.1|AE013623_4 putative permease of ABC transporter [Yersinia pestis KIM 10]
 gi|45438511|gb|AAS64057.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis biovar Microtus str. 91001]
 gi|108777343|gb|ABG19862.1| branched-chain amino acid transport system, permease component
           [Yersinia pestis Nepal516]
 gi|108781552|gb|ABG15610.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis Antiqua]
 gi|115349256|emb|CAL22223.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis CO92]
 gi|145209254|gb|ABP38661.1| branched-chain amino acid transport system, permease component
           [Yersinia pestis Pestoides F]
 gi|149289064|gb|EDM39144.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis CA88-4125]
 gi|152958880|gb|ABS46341.1| carbohydrate uptake (CUT2 family) ABC transporter, permease protein
           [Yersinia pseudotuberculosis IP 31758]
 gi|165914606|gb|EDR33220.1| carbohydrate uptake (CUT2 family) ABC transporter, permease protein
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165920440|gb|EDR37717.1| carbohydrate uptake (CUT2 family) ABC transporter, permease protein
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165989098|gb|EDR41399.1| carbohydrate uptake (CUT2 family) ABC transporter, permease protein
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166204634|gb|EDR49114.1| carbohydrate uptake (CUT2 family) ABC transporter, permease protein
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166961368|gb|EDR57389.1| carbohydrate uptake (CUT2 family) ABC transporter, permease protein
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167048607|gb|EDR60015.1| carbohydrate uptake (CUT2 family) ABC transporter, permease protein
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167055521|gb|EDR65314.1| carbohydrate uptake (CUT2 family) ABC transporter, permease protein
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|169749218|gb|ACA66736.1| Monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|229678316|gb|EEO74421.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis Nepal516]
 gi|229687378|gb|EEO79453.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229695688|gb|EEO85735.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229705721|gb|EEO91730.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis Pestoides A]
 gi|262363295|gb|ACY60016.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis D106004]
 gi|262367326|gb|ACY63883.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis D182038]
 gi|270337142|gb|EFA47919.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
 gi|294355692|gb|ADE66033.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis Z176003]
 gi|320017202|gb|ADW00774.1| putative branched-chain amino acid transport system, permease
           component [Yersinia pestis biovar Medievalis str. Harbin
           35]
          Length = 329

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 82/292 (28%), Gaps = 20/292 (6%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +   +  +     I  + A GL  VV   G + ++     AI  Y         G 
Sbjct: 33  PEFLTLGNLTDVATSYAILGILACGL-FVVLIAGGIDISFPAVTAIAQYVMASWVITQGG 91

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S  L + ++  +    G+I GL     +      A +I               TNG    
Sbjct: 92  SFPLALVMAMAVGLLLGLINGLLVYWLKV----PAIIITIATLNLFYGLLVYFTNGTWLY 147

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
              D                        Y+  +   LL +        + +  T +    
Sbjct: 148 GFPDWFMTGINWFSFE--------GSDGYDYGLTLPLLCLAGTIIFTGVMMNYTRLGRQI 199

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N+ A   L   I    L  +       G+A    A     ++P+       + V+
Sbjct: 200 FAMGSNKDAASRLGINIFRLHLYVYGYMGILAGVAAVVQAQISQSVAPNSL-MGFELTVL 258

Query: 271 SIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + V+L      GG  SL+       +L  +      ++   +   +      
Sbjct: 259 AAVVLGGTSMSGGRGSLTGTVLGVMLLAFLQNGLTLLSVSSYWHTVFSGVII 310


>gi|229173826|ref|ZP_04301366.1| Monosaccharide-transporting ATPase [Bacillus cereus MM3]
 gi|228609676|gb|EEK66958.1| Monosaccharide-transporting ATPase [Bacillus cereus MM3]
          Length = 334

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 98/311 (31%), Gaps = 22/311 (7%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +     +V  ++  +          I  + +   +  + A G ++++ + G + L+C   
Sbjct: 28  LAFASLIVLVVIFSIASANFLQFDNIIGIFLSTAVTGILALGATMIIVTSG-IDLSCGTV 86

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             + +    +     GL +W+ +    +I    G+I G    K +         +M    
Sbjct: 87  LTLSSVMTGVFAVNLGLPVWVAVIGGILIGAVVGLISGAAIAKLKIPPFIATLAMMMIAK 146

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
              L+  K                       S+  F +     +I    +   +     +
Sbjct: 147 GLALVISKA----------------TPIYFTSIPSFNKIAMGSIIPGFAIPNAVFIFFGM 190

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +    L L +T I      +  N++A       +   K+  + ++  F G+AG   A+  
Sbjct: 191 AIFASLILNKTIIGRYTFALGSNEEATRLSGVNVDKWKIIIYMIAGVFTGVAGIIMASRL 250

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +   P +    E   + ++VI      GG  ++        I+  +      ++      
Sbjct: 251 NSAQPALGAGYELEAIAAVVIGGTSLSGGKGTILGTVIGALIMSVLTNGLQILSVPQEWQ 310

Query: 309 LLKFDCSFNMR 319
            +       + 
Sbjct: 311 TVVVGAVILLA 321


>gi|134098458|ref|YP_001104119.1| inner-membrane translocator [Saccharopolyspora erythraea NRRL 2338]
 gi|291003325|ref|ZP_06561298.1| inner-membrane translocator [Saccharopolyspora erythraea NRRL 2338]
 gi|133911081|emb|CAM01194.1| inner-membrane translocator [Saccharopolyspora erythraea NRRL 2338]
          Length = 331

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 98/307 (31%), Gaps = 26/307 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +V  + L     +  +   + ++G Q  +  + A G+++V+   G + L+     
Sbjct: 27  AAGALIVAFIALSFVAPSFLTADNLFNLGSQTSVNAVMAVGVTLVI-ITGGIDLSVGSVA 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+     V+L + +G +  + +     +    G+I GL               ++S    
Sbjct: 86  ALSGVLGVMLMADFGFNPLIGVLGGIAVGAIAGLINGLLVSVVGLPPFIATLGMLSVGRG 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +LI                        V        F          +   ++ +  ++
Sbjct: 146 LVLI--------------------FTGAVAVFGAPESFRLLGQGVIGVIPIPIVLIAVVA 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +  L L RT +      +  N +A       +     S + +S A  G+ G   A+  +
Sbjct: 186 VAGHLVLTRTRLGRYAYVMGSNMEAARLSGVPVRKYTTSVYVLSGALAGLGGMIAASRIN 245

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+  +  E  ++ ++VI      GG  ++        ++  +      ++   F   
Sbjct: 246 SGQPNFGEGLELDVIAAVVIGGASLFGGRGTVVGSLIGAFLVAVIRNGAVQLDISTFYQN 305

Query: 310 LKFDCSF 316
           +      
Sbjct: 306 VLIGVII 312


>gi|304394976|ref|ZP_07376860.1| inner-membrane translocator [Pantoea sp. aB]
 gi|304357229|gb|EFM21592.1| inner-membrane translocator [Pantoea sp. aB]
          Length = 341

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 93/308 (30%), Gaps = 27/308 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ ++  L  F+      +   +  + +   +      G S V+   G + L+C    
Sbjct: 25  IAVVFLLVMLGGFIATPNFLTVSNMMVLLLNGAVIGFLCLGQSFVL-LTGGIDLSCGSIV 83

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      +L  ++G+   L +P+   +    G+I GL   +       +   +M     
Sbjct: 84  AMTCVVAALLMEKFGIPWPLAVPMVLAVGALSGLINGLIIERTGVPPFIVTFAMMGVAAS 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                   +       +    +        + + + ++ +    
Sbjct: 144 I--------------------PQIITGAESIRVTQIGYSLIGQSKPLGIPFPVIALLLAI 183

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +++LRRT        +  N  A      +I    L  +A+S       G  + +   
Sbjct: 184 VIGVIFLRRTITGTHIYAVGGNADAARLSGISIPRITLLVYAISGLCAACGGLIYGSRLM 243

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              P   +  E    I+  ++GG+       S+        ++  +  L   +N   +  
Sbjct: 244 TGYPTAGRGDELFFSIAGAVVGGVSLFGGTGSIIGAMIGAMLIAAISNLMNVLNVSAYWQ 303

Query: 309 LLKFDCSF 316
            L      
Sbjct: 304 PLVIGLII 311


>gi|317047261|ref|YP_004114909.1| inner-membrane translocator [Pantoea sp. At-9b]
 gi|316948878|gb|ADU68353.1| inner-membrane translocator [Pantoea sp. At-9b]
          Length = 287

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 92/305 (30%), Gaps = 28/305 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G  I       L+     A  +GA     L   +G  +WL +P 
Sbjct: 6   LSTGLSLGSMYALLALGFHITWIVSRTLNFAQGSAMMVGATLGYSLYVTFGWPLWLALPA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+++    ++      + A L+ +     ++      T GK           
Sbjct: 66  TLLCCALYGVVIERLLVRPFVARNSEAWLMATVAGGILVDNLAMFTFGKEPRQFPVTDVT 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S               +    + L    +  ++ L  R + I         N +
Sbjct: 126 FTLFGSSW-------------SLINLLIPLTGVVMVVALTLIRRYSRIGKVLEATVQNPR 172

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +      AFA+S+ F  +AG   A                +   ++ ILGG+
Sbjct: 173 AAQLMGIRVNTVVAVAFALSTVFAALAGLLIAPLFSI--QSDMGTLFGLKAFAVAILGGL 230

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S S I  A  +      L        F  +  F               + L + +R + 
Sbjct: 231 ASSSGIWVAGLLFGLSEALVTLWFGSAFTQIFTFS-------------LVILALALRPNG 277

Query: 339 LLRLR 343
           L   +
Sbjct: 278 LFGQK 282


>gi|254501005|ref|ZP_05113156.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222437076|gb|EEE43755.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 332

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 46/327 (14%), Positives = 99/327 (30%), Gaps = 24/327 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           S FS+R    +  + L  +   +   +F     +   I ++  QI I ++ A G++ V+ 
Sbjct: 14  SRFSVRTVLQNAGIGLALLALIIFFSVFTEHFLTPNNITNILTQITINLVLAVGMTFVIL 73

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G + L+     A  A       +  G      I ++ + +   G++ G  +      +
Sbjct: 74  IGG-IDLSVGSVMAFAAVVAGKAITLPGFGPAEAIALAVIAATLTGVLCGFINGAISAYW 132

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
              + +I   +          +++ +                                  
Sbjct: 133 ALPSFIITLGMLNIARGAALQVSDAQTIYSFPYAFEEF----------------GSAMIY 176

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +  V L    L       L  T        I +N++A      ++   K++AF +    
Sbjct: 177 GVPVVFLVALVLVFVAWFVLNFTVFGRLLYGIGNNEEAVRLAGHSVRRYKIAAFTICGFT 236

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVV 295
            G+A   + A  + IS  +      +  I+ VI+      GG  S+        I+  + 
Sbjct: 237 AGIAAVVYMARLN-ISSPIAGIGFELNAIAAVIIGGTSLSGGRGSVIGTLLGAFIIGVLA 295

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                +    F   +            
Sbjct: 296 NGLILIGLSDFMRQMITGVVIIFAVIL 322


>gi|172060308|ref|YP_001807960.1| monosaccharide-transporting ATPase [Burkholderia ambifaria MC40-6]
 gi|171992825|gb|ACB63744.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MC40-6]
          Length = 349

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 92/285 (32%), Gaps = 11/285 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            VV  +   L   A  S   + ++ +Q+          + V+   G + L+     A+  
Sbjct: 39  LVVLIVAFSLTSAAFFSVGNLMTVSLQVTSIAYLGVAATCVI-ITGGIDLSVGSVLALAG 97

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
            +  +L          ++    + +    +     +    G    IATL M  + + + +
Sbjct: 98  VAAALLVKAGIPVPVAMLGGMLVGAACGWVNGICVTHM--GLPPFIATLGMMLVARGLAL 155

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +                L        S I    FP +       + Y ++ M  L  ++ 
Sbjct: 156 QITGARPVSGLGDAFGELGNGALFKISHIGADGFPDT---IFPGIPYPVVIMVVLFVAVS 212

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L RT++      +  N +A       +   KL  + +S    G  G    +      P
Sbjct: 213 VLLSRTSLGRHIYAVGSNAEAARLSGVNVQGVKLFTYVLSGLLAGATGCVLMSRLVTAQP 272

Query: 259 DMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +     E   + S VI     +GG+ ++S  A    ++  +    
Sbjct: 273 NEGVMYELDAIASAVIGGTSLMGGVGTISGTAIGAFVIGVLRNGL 317


>gi|115351280|ref|YP_773119.1| inner-membrane translocator [Burkholderia ambifaria AMMD]
 gi|115281268|gb|ABI86785.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia ambifaria AMMD]
          Length = 349

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 92/285 (32%), Gaps = 11/285 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            VV  +   L   A  S   + ++ +Q+          + V+   G + L+     A+  
Sbjct: 39  LVVLIVAFSLTSAAFFSVGNLMTVSLQVTSIAYLGVAATCVI-ITGGIDLSVGSVLALAG 97

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
            +  +L          ++    + +    +     +    G    IATL M  + + + +
Sbjct: 98  VAAALLVKAGIPVPVAMLGGMLVGAACGWVNGICVTHM--GLPPFIATLGMMLVARGLAL 155

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +                L        S I    FP +       + Y ++ M  L  ++ 
Sbjct: 156 QITGARPVSGLGDAFGELGNGALFKISHIGADGFPDT---IFPGIPYPVVIMVALFVAVS 212

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L RT++      +  N +A       +   KL  + +S    G  G    +      P
Sbjct: 213 VLLSRTSLGRHIYAVGSNAEAARLSGVNVQGVKLFTYVLSGLLAGATGCVLMSRLVTAQP 272

Query: 259 DMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +     E   + S VI     +GG+ ++S  A    ++  +    
Sbjct: 273 NEGVMYELDAIASAVIGGTSLMGGVGTISGTAIGAFVIGVLRNGL 317


>gi|296156109|ref|ZP_06838948.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295893615|gb|EFG73394.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 333

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/316 (11%), Positives = 83/316 (26%), Gaps = 26/316 (8%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           ++   +    A++  +  F       S     ++G Q  +  + A G++ V+     + L
Sbjct: 33  DRPYALYGAFAILLVVFSFA-SPWFLSIDNFLNIGRQTALVSIIAIGMTFVI-IARQIDL 90

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+   S  +  +  G +  +            G I G+ + +            
Sbjct: 91  SVGSTLALSGMSAALAMTYLGNNWVIGALAGIGTGAIVGAINGIVTTRVNIPSF------ 144

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                         +T G         L    T    +                +   ++
Sbjct: 145 -------------LVTLGTLSAARGLALMVTTTKPVIIDNDSFIAIFGEGDIFGVPVPII 191

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
                  + IL L  +           N  A              AF ++    G+A   
Sbjct: 192 WTVLAVIAGILLLHYSVFGRQIYAAGGNPTAALYSGINTRRVTTLAFILTGMLAGLAALV 251

Query: 249 FAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNF 303
            +A      PD+ +  E  ++ S+      + GG   +      + I+  +      +  
Sbjct: 252 LSARSHAARPDVVQGMELDVIASVTLGGCSLFGGRGFVLGTLLGSLIIGTLNNGLVLLGV 311

Query: 304 YYFNSLLKFDCSFNMR 319
                L+         
Sbjct: 312 SSSLQLVIKGVIIVAA 327


>gi|283836174|ref|ZP_06355915.1| hypothetical protein CIT292_10600 [Citrobacter youngae ATCC 29220]
 gi|291068368|gb|EFE06477.1| ribose ABC transporter, permease protein [Citrobacter youngae ATCC
           29220]
          Length = 321

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 91/312 (29%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTMSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                   Q 
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        +     ++G+ FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPVNTGFTDNADLFGWFGIGRPLGVPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGISVSKIKIIVYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|229513638|ref|ZP_04403102.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           TMA 21]
 gi|229349515|gb|EEO14471.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae
           TMA 21]
          Length = 329

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/326 (11%), Positives = 90/326 (27%), Gaps = 26/326 (7%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            ++   Y      + +     + L      S   + ++  Q     + A G++ V+ +  
Sbjct: 17  PIQWRDYIIYFVFVGIFIFFSVMLHDKGFLSSVNLMNIARQTATITIMAVGMTFVLSAA- 75

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+     A+ A    +   +   SI + +  + ++    G I G+   +        
Sbjct: 76  EIDLSFGATVALAAIVSAL-TLQETDSILMAVSAALLVGTMIGFINGIFVTQVGIPSF-- 132

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
                             +T G  GI      +        +                  
Sbjct: 133 -----------------LVTLGTTGIITGIARWSTSLQSIPIDNDTYAFIFGSGDIGPFS 175

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            + +    ++A     LR T           N+ +       +   KL    ++     +
Sbjct: 176 VLFIWTLLVAAVGAFVLRNTTFGKHVLATGGNKVSAMYSGINVNRIKLYVLMLNGFLAAL 235

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
           AG  ++         + +    +++ +++I      GG  ++        I+  V     
Sbjct: 236 AGILYSGRLYSARYTLGESDLMLVIAAVIIGGTSLFGGKGTVIGSVIGALIMGMVNNGLI 295

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMV 325
            M       L+       +  T  M 
Sbjct: 296 LMGLNVDQQLILRGIIVIVAVTFTMG 321


>gi|116694454|ref|YP_728665.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
 gi|113528953|emb|CAJ95300.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
          Length = 294

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 93/274 (33%), Gaps = 12/274 (4%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +        +    +    Y M + GL+++ G L +++      + +GA       +  G
Sbjct: 6   IPLPALLSQLLLGLVNGAFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLAWAGMAYAG 65

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           LS W+++ +S ++  A G+ +    L++      I  L+++     ++        G +G
Sbjct: 66  LSYWVMLLLSPLVVAALGVGIEKTMLRWIYKLDHIYGLLLTLGITLVIEGIFRSVYGVSG 125

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +  A                      F+    +  +V+     +  S    + +T +   
Sbjct: 126 LPYAPP----------EALQGASDLGFMRLPNYRVWVVGASLAVCLSTWYVIEKTRLGAY 175

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R   +N K   +    +       +    A    AG   A         +   +  I+V
Sbjct: 176 LRAGTENAKVVEAFGVNVPRMVTLTYGFGVALAAFAGVLAAPVMQV--SPLMGQNLIIVV 233

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
            ++V++GGM S+         L  +  L   +  
Sbjct: 234 FAVVVIGGMGSIMGAILTGLGLGVIEGLAKVLYP 267


>gi|332799988|ref|YP_004461487.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp.
           Re1]
 gi|332697723|gb|AEE92180.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter
           sp. Re1]
          Length = 332

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/297 (11%), Positives = 83/297 (27%), Gaps = 31/297 (10%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             +   + ++  Q  IY + A G+ +V+ S G + L+      +      +  +     I
Sbjct: 52  FLTVNNLKTLARQASIYGIIAIGMLVVIISAG-IDLSVGSVTGLSGIVAALCMANGIS-I 109

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT--LIMSEIFQNILIKWKPITNGKAGI 150
           +  + ++ +     G+I G+     +          + +      +L     I+      
Sbjct: 110 FASLIIALVSGLVIGLINGILIHNGKVPPFIATMGTMTVVRALIMLLTNASMISGQPEAF 169

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               +  F                      + + ++ L    +    +    +T      
Sbjct: 170 RKITQTEF----------------------LNIPFLFLVWVVVIIIAMFITTKTVFGRNV 207

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N++A       I       +  S+    +AG    +      P      E   + 
Sbjct: 208 YAVGSNKEAARLSGINIKKTIYGVYIFSAFACSIAGILLTSRLGNGVPTAGDGYELDAIA 267

Query: 271 SIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           S V+      GG  S+      + I+  + +    +    F   +       +    
Sbjct: 268 SAVVGGASLDGGTGSVIGTVLGSMIMATLRQGGVLLGVNSFVLEIIIGSLIVVAVLV 324


>gi|319897981|ref|YP_004136178.1| d-ribose transporter subunit [Haemophilus influenzae F3031]
 gi|317433487|emb|CBY81870.1| D-ribose transporter subunit [Haemophilus influenzae F3031]
          Length = 322

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 88/301 (29%), Gaps = 23/301 (7%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           + +      S   I ++  Q  +  + A G++ V+   G + L+     A+       + 
Sbjct: 30  VSMINPDFFSVDNILNILRQTSVNAIIAVGMTFVILIAG-IDLSVGSVLALTGAIAASMV 88

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           S       ++  V  + +   G+   + +                + F   L+    +  
Sbjct: 89  SIELPIFLVIPVVLLIGTLLGGISGVIVAK------------GKVQAFIATLVTMTLLRG 136

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                     +    +    L     F S    Y + +   +  M  + A     L+ T 
Sbjct: 137 ITMVYTDGRPITTGFSDNADL-----FASIGTGYVLGIPAPIWIMSIVFAVAWYILKHTP 191

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           I      +  N+ A       +   K+  FAVS     +AG    +      P      E
Sbjct: 192 IGRYIYALGGNEAATQLSGINVNKIKVFVFAVSGFLSALAGLIVTSRLSSAQPTAGVSYE 251

Query: 266 NIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              + ++V+     +GG   +        I+  +      ++   +  ++       +  
Sbjct: 252 LDAIAAVVVGGTSLMGGKGRVMGTLIGALIIGFLNNALNLLDISSYYQMIAKALVILVAV 311

Query: 321 T 321
            
Sbjct: 312 L 312


>gi|319782467|ref|YP_004141943.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168355|gb|ADV11893.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 338

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 93/309 (30%), Gaps = 13/309 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  V   ++  +   +      + ++  QI I  + A G++ V+ + G + L+     A
Sbjct: 25  LLFLVALIIVFTVLKPSFMDPINLFNITRQISITGLIALGMTFVILTAG-IDLSVGSLLA 83

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                  ++             +S   SG  G       L       A   +    I + 
Sbjct: 84  FCGMVAAVVAKGGT-----ANTLSLSTSGTQGFGWFAALLAAIIVGAAAGGVQGLVITRL 138

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +  +     G             G  +       R+  + +I  + +  ++     +  
Sbjct: 139 KVPPFVVTLGGLTVFRGLTLTISNGGPISGFDASMRWFGTGLIGPVPVPALIFAAAAILC 198

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I+L   R     A   +  N +A       +    +S + +   F G+A    +A  + 
Sbjct: 199 HIVLRYTR--YGRAVYAVGGNAEAARLSGLRVDRILVSVYVIVGFFAGLAAFVLSARLNS 256

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                    E  ++ ++VI      GG+ S+       A++  +       N   +   +
Sbjct: 257 SEAVAGIGYELTVISAVVIGGTSLFGGIGSVGGTVVGAALIGVLQNGLQFNNVSSYTQSI 316

Query: 311 KFDCSFNMR 319
                  + 
Sbjct: 317 VIGLILILA 325


>gi|307299306|ref|ZP_07579107.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915102|gb|EFN45488.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 341

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/315 (12%), Positives = 94/315 (29%), Gaps = 27/315 (8%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
             L +  +V  ++  L      S   I ++  QI +  + + G+++++   G + ++   
Sbjct: 27  FYLLVAEIVIAVITGLVNPRFFSTSNIMNVLEQIAVLGVVSSGMTLLI-ISGEIDISVGA 85

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
              + +    ++        +L+  ++ +       ++   + +       I +L    +
Sbjct: 86  NIGLSSVVMAMIIKAGQ--PYLIAIIAGIALAVFNSLLVGITARAFKAPSFITSLAFISV 143

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           FQ + +     T                      I               +    L    
Sbjct: 144 FQGVALAITKGTFQT-------------------IYGKFEFIGTYRLWEIVPLSFLISIA 184

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               +   L  T +      +  N  A +    ++  AKLSAFA++  FIG+A     + 
Sbjct: 185 AYIVMHFLLSYTKLGRRTYAVGSNPSAAYLSGISVNKAKLSAFALNGLFIGVAAMVLLSR 244

Query: 253 RDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
                P      E   + ++VI      GG   +        ++  +      +    + 
Sbjct: 245 IGAAQPSTGTGIELKAIGAVVIGGTPLAGGKGRIIGTFFGVLLMGIISNSLNMLRVNPYF 304

Query: 308 SLLKFDCSFNMRHTT 322
             + F          
Sbjct: 305 QTVTFGLLIIASLAV 319


>gi|319765016|ref|YP_004128953.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|330827211|ref|YP_004390514.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317119577|gb|ADV02066.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|329312583|gb|AEB86998.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 286

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 108/297 (36%), Gaps = 27/297 (9%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           ++Y + A GLSIV G L  ++      Y +GAY      +R+G S W  + ++ +  GA 
Sbjct: 16  MLYFLLAVGLSIVFGLLRFVNFAHGAFYLMGAYFCY-QLTRWGWSFWWALLIAPLAVGAI 74

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G +     L+          ++++     ++ +   +  G  G  VA      G      
Sbjct: 75  GWLTEKLLLRHVYAKPHEFHILVTVGLALVVQELVILQWGPLGDSVATPDLLQGV----- 129

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                      +Y  +  +V+     L+  +   L  T + +A R   ++ +    L   
Sbjct: 130 -----VMWGGFVYPKYRLFVIGFTAVLAVLLWWVLEGTRLGSAVRAGSESTEMVSLLGLN 184

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +       FA+ +A   +AG   A  R              +   IV++GG+ S S    
Sbjct: 185 VFGIFSLVFALGAATAALAGVLAAPIRGA--EPFMGIEALGVAFVIVVVGGLGSFSGALV 242

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
              ++  V  +   +              +      ++ +A+  V+L+R H LL  +
Sbjct: 243 GGILIGVVQSVMSTL--------------WPEGARIMIYVAMAAVLLLRPHGLLGRK 285


>gi|292486512|ref|YP_003529378.1| ribose transport system permease rbsC [Erwinia amylovora CFBP1430]
 gi|292897751|ref|YP_003537120.1| ribose transport system permease [Erwinia amylovora ATCC 49946]
 gi|291197599|emb|CBJ44692.1| ribose transport system, permease protein [Erwinia amylovora ATCC
           49946]
 gi|291551925|emb|CBA18962.1| Ribose transport system permease protein rbsC [Erwinia amylovora
           CFBP1430]
          Length = 322

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 85/302 (28%), Gaps = 23/302 (7%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           +        +   + ++  Q  +  + A G+++V+ + G + L+     A+       L 
Sbjct: 33  VSSLSPNFFTVSNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLALTGAVAASLV 91

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
                ++  +     + +G   +   +                     Q  +     +  
Sbjct: 92  GLEVNALVAVASSLVLGAGIGAITGVIV---------------AKGNVQAFIATLVMMLL 136

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
            +    V      + T   +    F +        I     L+ + FL+A  +L   R  
Sbjct: 137 LRGVTLVYTNGSPVNTGFSANADLFGWFGIGRPLGIPTPVFLMAVVFLAAWYMLHHTR-- 194

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +      +  N+ A       +   K+  +++      +AG    A      P      E
Sbjct: 195 LGRYIYALGGNEAATRLSGIRVNRVKIIVYSLCGMLAALAGTIEVARLSSAQPTAGTGYE 254

Query: 266 NIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              + ++V     + GG   ++       IL  +      +    +   +       +  
Sbjct: 255 LDAIAAVVLGGTSLAGGKGRITGTLIGALILGFLNNGLNLLGVPSYYQTIVKAVVILLAV 314

Query: 321 TT 322
             
Sbjct: 315 LV 316


>gi|229197304|ref|ZP_04324034.1| Monosaccharide-transporting ATPase [Bacillus cereus m1293]
 gi|228586181|gb|EEK44269.1| Monosaccharide-transporting ATPase [Bacillus cereus m1293]
          Length = 334

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 98/311 (31%), Gaps = 22/311 (7%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +     +V  ++  +          I  + +   +  + A G ++++ + G + L+C   
Sbjct: 28  LAFASLIVLVVIFSIASANFLQFDNIIGIFLSTAVTGILALGATMIIVTSG-IDLSCGTV 86

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             + +    +     GL +W+ +    +I    G+I G    K +         +M    
Sbjct: 87  LTLSSVMTGVFAVNLGLPVWVAVLGGILIGAVVGLISGAAIAKLKIPPFIATLAMMMIAK 146

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
              L+  K                       S+  F +     +I    +   +     +
Sbjct: 147 GLALVISKA----------------TPIYFTSIPSFNKIAMGSIIPGFAIPNAVFIFFGM 190

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +    L L +T I      +  N++A       +   K+  + ++  F G+AG   A+  
Sbjct: 191 AIFASLILNKTIIGRYTFALGSNEEATRLSGVNVDKWKIIIYMLAGVFTGVAGIIMASRL 250

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +   P +    E   + ++VI      GG  ++        I+  +      ++      
Sbjct: 251 NSAQPALGAGYELEAIAAVVIGGTSLSGGKGTILGTVIGALIMSVLTNGLQILSVPQEWQ 310

Query: 309 LLKFDCSFNMR 319
            +       + 
Sbjct: 311 TVVVGAVILLA 321


>gi|163793665|ref|ZP_02187640.1| ABC-type transporter, permease component: HAAT family protein
           [alpha proteobacterium BAL199]
 gi|159181467|gb|EDP65982.1| ABC-type transporter, permease component: HAAT family protein
           [alpha proteobacterium BAL199]
          Length = 296

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 85/303 (28%), Gaps = 22/303 (7%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +Y + A G  +V+G++G ++        +G    V + S     + +   + 
Sbjct: 10  VNAVALGAVYALVALGFVLVIGAVGAVNFAHGELVMLGGMVAVGVASLLPADLPVPGLLV 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                A   + GL         L  A    S     I +         AGI    RL   
Sbjct: 70  LPAVLAVMAVAGLFVAGVAYAPLRRAPPT-SVFIATIALGLIIQHGVTAGIGPEPRLGPP 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                +      +  + +         +     L   + + L+RT      R    + + 
Sbjct: 129 MIDSGT------WHFAGIGLARQQLATIATAVALIVGVHILLQRTRFGRRLRAAAQDSEM 182

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             ++   +      +FA+++A  G AG     S   +          +      ++GG  
Sbjct: 183 ARAIGIRVNVTVAVSFALAAALAGAAGL--LLSNQYLVTPTDGAMLMLKAYVATVIGGWG 240

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
            +   A     +     L      Y                  L+ + +  V+  R   L
Sbjct: 241 RIWGAALGAFAIAVFETLVAAWTSYLVAEA-------------LLYVGVLAVLAFRPKGL 287

Query: 340 LRL 342
              
Sbjct: 288 FGE 290


>gi|118588421|ref|ZP_01545830.1| branched-chain amino acid ABC transporter, permease protein
           [Stappia aggregata IAM 12614]
 gi|118439127|gb|EAV45759.1| branched-chain amino acid ABC transporter, permease protein
           [Stappia aggregata IAM 12614]
          Length = 317

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 87/301 (28%), Gaps = 16/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y + A G  ++  + G+ +    I       + V L      +   LI    ++
Sbjct: 28  FVAGILYALIALGFVLIFKASGVFNFAQGIMVVFAGLTLVGLNENGVPAYLALILTIGVM 87

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 +  +           I  +    +   ++   + +  G+        +      
Sbjct: 88  GVLAYGVERVVMRPLVNQPEIILLMATIGLTYFLVGFGEFVFGGE----PKQMITEQLGL 143

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                 F       VI +       +    +  ++ ++  +T I  A R + D+ +A  S
Sbjct: 144 PTGSTAFEFGDRGLVILQHIDIAAAVIAVVMVTALGVFFNKTRIGRALRAVADDHQAALS 203

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +  ++       +  +       G  + A                  + ++ILGG TS+ 
Sbjct: 204 VGISLNQIWAIVWFAAGLVALATGIMWGARS---DVSFALEIVAFKALPVLILGGFTSIP 260

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  I+    ++            ++           L  I   + +L R   L   
Sbjct: 261 GAIVGGLIIGFGEKIGELYWGGLVGGGIESW---------LAYIIALIFLLFRPQGLFGE 311

Query: 343 R 343
           R
Sbjct: 312 R 312


>gi|108805787|ref|YP_645724.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
 gi|108767030|gb|ABG05912.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
          Length = 336

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 92/312 (29%), Gaps = 25/312 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +   + L +      +   + ++G Q  +  + A G+++V+ + G + L+     
Sbjct: 31  AAGALIAVFVFLSIASPNFLTADNLFNVGTQTAVTAVIAIGMTLVIITAG-IDLSVGSVA 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+     V++    GL + + I    ++   CG++ GL       +       ++S    
Sbjct: 90  ALSGVMGVMMMVDLGLPVLVAILGGTLVGALCGLVNGLLISVAGLNPFIATLGMLSV--- 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                         G+                 R            I +  +L+      
Sbjct: 147 ------------ARGLVYIVSDAQAVFGTPDSFRLLGQGVLAGGIPIPVVVILVVAVAGY 194

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +     RT +      I  N +A       I     + + +S A  G  G   ++   
Sbjct: 195 VVL----SRTKLGRYAYAIGSNMEAARLSGIPIRRYLTAVYVISGALAGFGGMIASSRVA 250

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ + VI      GG  ++        ++  +      ++   F   
Sbjct: 251 SGQPNFGMGLELDVIAAAVIGGASLFGGQGTVVGTLIGAFLIALIRNGAVLLDVNIFYQQ 310

Query: 310 LKFDCSFNMRHT 321
           +       +   
Sbjct: 311 VIIGVVIWLAVM 322


>gi|56698526|ref|YP_168902.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56680263|gb|AAV96929.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 343

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 44/336 (13%), Positives = 115/336 (34%), Gaps = 17/336 (5%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           RL  +  +L +  +V   LL +   ++     +  + + ++I+ + A GL++V G + ++
Sbjct: 19  RLAPWMPVLLVPLLVLAGLLAIPNTSSWLTLTVSGLAMGMMIF-LMASGLTLVFGLMDVI 77

Query: 67  SLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           +       ++GA+  V +L    G++    + ++    G   +   L +      +  + 
Sbjct: 78  NFGHGAFVSVGAFVGVSVLLLLGGMTGAPSLALNLAAMGLAVIGAMLATGAMGWAFEKVI 137

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
              +       ++           + +           R          +    E +   
Sbjct: 138 VEPVYGHHLKQILVTMGGLIVVEQLIIVLWGPEEIYISRPEALKGAITFAGAALEKYRLV 197

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            +     + A++   LRRT I    R   +N +   +L   +    +  F   SA  G+ 
Sbjct: 198 AVGLGLVVFAAMRWTLRRTKIGLIVRAGVENGEMVQALGYRLRLVFVGVFIAGSALAGLG 257

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  +   ++ +S  M      I++  +VI+GG+ S+        ++  +      +    
Sbjct: 258 GVMWGLYQEVVSAHM-GNQAMILIFIVVIIGGLGSVEGCFIGALLVGLMQNYVAFLE--- 313

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                              +  +  +++ R   ++ 
Sbjct: 314 -----------PKVALISNIGLMVAILMWRPMGMIP 338


>gi|126667834|ref|ZP_01738800.1| possible ABC transporter, permease protein precursor [Marinobacter
           sp. ELB17]
 gi|126627650|gb|EAZ98281.1| possible ABC transporter, permease protein precursor [Marinobacter
           sp. ELB17]
          Length = 331

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 91/292 (31%), Gaps = 34/292 (11%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             ++IL + +FA   ++++G  GLLS       A GAY+   L + +      L  ++  
Sbjct: 47  FLMKILCFALFAVAFNLLLGFTGLLSFGHAAFLASGAYTTGYLLTTFSGLSTELGIIAGT 106

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           +      +        R         +               T G+ G++   R      
Sbjct: 107 LVATLLGLGFALVAIRRQGIYFAMITLALSQLVFFFFVQSSFTGGEDGLHGIPR------ 160

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                          +   + MYY +L +      ++  +  +      + I+ N+    
Sbjct: 161 -------GQFLGLIDLNDNLNMYYFVLAVFLAGYLLVQRIVDSPYGQVLKAIKQNEPRAI 213

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           SL   +   K+ AF +S+   G+AG+         S +   +  +  VI + +LGG  +L
Sbjct: 214 SLGYNVNRYKIIAFVISAGLAGLAGSMKTVVFQLASLNDAHWHMSGEVILMTLLGGTGTL 273

Query: 282 SKIAKATAILI---------------------GVVELCCGMNFYYFNSLLKF 312
                  A ++                       V             + KF
Sbjct: 274 LGPVVGAAFVVNLEYQLSQGPLADWVDAILGTIFVLTVLMFQSGIVGQVQKF 325


>gi|237654481|ref|YP_002890795.1| ABC transporter permease [Thauera sp. MZ1T]
 gi|237625728|gb|ACR02418.1| inner-membrane translocator [Thauera sp. MZ1T]
          Length = 306

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 97/308 (31%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL++V G +  ++L     Y  GAY    +    G     ++  
Sbjct: 10  LLNGLGYGLMLFLIAAGLTLVFGIMDTMNLAHGSLYMAGAYIAARVHEASGAFALAVLVA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +      +   L   +              +    +L  +  I      +     +  
Sbjct: 70  VGVTVAIAAVAEFLVIRRLYRR----------DHLVQVLATFGIILIADDAVKAIWGVAP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L  +  + +         + Y  +   ++     ++  + L + +T I    R    N++
Sbjct: 120 LLASTPAALAGPVALLEGLPYPSYRLLLIGAGLTVALGLHLLVNKTRIGMLVRAGASNRQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       FA+ +A   +AGA  A             +  I  + ++++GG+
Sbjct: 180 MAEHMGVRVGGVFAFVFALGAALAALAGALMAP--ISAVQIGMGEAILIPALVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335
            S+     A  ++  V             ++L    +           M + +  V+ ++
Sbjct: 238 GSVRGAFVAALLVGLVDTAGRAFLPPALRAVLPPAVAADLGPALAGIAMYVLMAAVLSLK 297

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 298 PAGLFPAR 305


>gi|114762378|ref|ZP_01441836.1| probable sugar ABC transporter permease protein [Pelagibaca
           bermudensis HTCC2601]
 gi|114544996|gb|EAU48000.1| probable sugar ABC transporter permease protein [Roseovarius sp.
           HTCC2601]
          Length = 355

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/312 (9%), Positives = 76/312 (24%), Gaps = 10/312 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++  +   +F     S   +  M   + +    A G++ V+   G + L+      
Sbjct: 28  FIALILVFVFFSIFAPNFLSTANMVIMSKHVALNAFLAIGMTFVI-VSGGIDLSVGSIVG 86

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L                 +     + +   ++     +L     +   I   
Sbjct: 87  LCGMVAGYLLLNGIDIGLGWSVQFNTLEICLIVALVGIAIGAMNAFLVTKLNVAPFIATL 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             +         +            T   S          F+   I ++ ++        
Sbjct: 147 GTLYIARGAAMLSSEGETFPNLTGNTEYGSHTYRMIGSGDFLGIPISIWMLIAV----GL 202

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                 +RT +      +  N++A       +   K   +  S     + G   ++    
Sbjct: 203 LAAYIAKRTPLGRFIYAVGGNERAAGLSGVKVTRVKYFVYMFSGFCAALVGIIISSQLVA 262

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + V     + GG   +        ++  + +    M    F   +
Sbjct: 263 AHPATGDTFELNAIAAAVLGGTSMSGGRGKIGGTIVGAFVIGVLSDGLVMMGVSAFWQTV 322

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 323 IKGIVIIAAVVI 334


>gi|217960602|ref|YP_002339166.1| ribose transport system permease protein RbsC [Bacillus cereus
           AH187]
 gi|222096661|ref|YP_002530718.1| ribose ABC transporter , permease protein [Bacillus cereus Q1]
 gi|229139803|ref|ZP_04268370.1| Monosaccharide-transporting ATPase [Bacillus cereus BDRD-ST26]
 gi|217064642|gb|ACJ78892.1| ribose transport system permease protein RbsC [Bacillus cereus
           AH187]
 gi|221240719|gb|ACM13429.1| ribose abc transporter, permease protein [Bacillus cereus Q1]
 gi|228643683|gb|EEK99947.1| Monosaccharide-transporting ATPase [Bacillus cereus BDRD-ST26]
          Length = 334

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 98/311 (31%), Gaps = 22/311 (7%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +     +V  ++  +          I  + +   +  + A G ++++ + G + L+C   
Sbjct: 28  LAFASLIVLVVIFSIASANFLQFDNIIGIFLSTAVTGILALGATMIIVTSG-IDLSCGTV 86

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             + +    +     GL +W+ +    +I    G+I G    K +         +M    
Sbjct: 87  LTLSSVMTGVFAVNLGLPVWVAVLGGILIGAVVGLISGAAIAKLKIPPFIATLAMMMIAK 146

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
              L+  K                       S+  F +     +I    +   +     +
Sbjct: 147 GLALVISKA----------------TPIYFTSIPSFNKIAMGSIIPGFAIPNAVFIFFGM 190

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +    L L +T I      +  N++A       +   K+  + ++  F G+AG   A+  
Sbjct: 191 AIFASLILNKTIIGRYTFALGSNEEATRLSGVNVDKWKIIIYMLAGVFTGVAGIIMASRL 250

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +   P +    E   + ++VI      GG  ++        I+  +      ++      
Sbjct: 251 NSAQPALGAGYELEAIAAVVIGGTSLSGGKGTILGTVIGALIMSVLTNGLQILSVPQEWQ 310

Query: 309 LLKFDCSFNMR 319
            +       + 
Sbjct: 311 TVVVGAVILLA 321


>gi|318057769|ref|ZP_07976492.1| inner-membrane translocator [Streptomyces sp. SA3_actG]
 gi|318079481|ref|ZP_07986813.1| inner-membrane translocator [Streptomyces sp. SA3_actF]
          Length = 295

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 84/280 (30%), Gaps = 5/280 (1%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            +Y + A GLS++ G + +L+       +IGAY+     S +            +     
Sbjct: 16  ALYFLVASGLSLIFGLMDVLNFAHGALLSIGAYATWWAASGHLPGAGPGGFGFVLAVVFG 75

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
                + ++        +    +    +  ++    I+     +                
Sbjct: 76  VCAGTVAAVLVEL----LVVRPLYTRPREQVLATVGISLAVPALLAGIWGSDAHRFPGPE 131

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                F        +    ++     + A + L+L RT      R   +++    +L   
Sbjct: 132 ALGDTFGLLGARVPVNRLVLVAAAVVVWAGLKLFLDRTRYGLVVRAGVEDRAMVTALGID 191

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +  A    FA+  A   + GA        + P     S  I    +V+ GGM S+S  A 
Sbjct: 192 VRRAFTLVFAIGGAAAALGGALGGLYFGSVDPRQ-GTSLLIFAFVVVVTGGMGSVSGAAV 250

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           A+ ++  V +            L        +       +
Sbjct: 251 ASVVIGLVQQFANYYTTAGLGDLAVVVLLAALLLLRPRGL 290


>gi|260655231|ref|ZP_05860719.1| branched-chain amino acid ABC transporter, permease protein
           [Jonquetella anthropi E3_33 E1]
 gi|260629679|gb|EEX47873.1| branched-chain amino acid ABC transporter, permease protein
           [Jonquetella anthropi E3_33 E1]
          Length = 273

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/293 (12%), Positives = 87/293 (29%), Gaps = 25/293 (8%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           Y + A GL+++   + +++      Y +G +    +     L   + I  SA+   A G+
Sbjct: 3   YALVALGLTLIFALMNVMNFAHGQLYMLGGFVTYYVYGMMKLPYPVAIAASALSLAAVGV 62

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
           +  +   K    Y            +                 +A   +         + 
Sbjct: 63  LFQVFLFKPVLRY----------SLREESSMLLSAGTATFLESLALIFFGEKHRGVPAVV 112

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
              +             V+          IL++R T    A R +  +      +   + 
Sbjct: 113 NGVYRIGNAFLPKGRLLVIALAFAFIGIFILFMRYTKPGRALRAMAQDAPTARLMGINVD 172

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
              +  +A++    G+AG+         S      S  I    +V++GG  ++S      
Sbjct: 173 RYAVLGWALAVLLAGVAGSLLVPISGVDSGIGNGIS--IKAFIMVMIGGAGAVSGALLGG 230

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            IL  +      +                     ++ + L + + +R + L+ 
Sbjct: 231 FILGMLEAWGYYLFPGGET-------------YLIIFVGLMIFLSLRPNGLMG 270


>gi|167856116|ref|ZP_02478857.1| ribose transport system permease protein RbsC [Haemophilus parasuis
           29755]
 gi|167852757|gb|EDS24030.1| ribose transport system permease protein RbsC [Haemophilus parasuis
           29755]
          Length = 319

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 94/312 (30%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   + ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 17  IIALITMIVVVSFLNPDFFTTDNLLNILRQTSVNAIIAIGMTFVILIAG-IDLSVGSVLA 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   +         L ++++IP   +  G  G++ G      +        + M      
Sbjct: 76  LTG-AVAATLVGIDLPVYIVIPTVLVFGGLIGLLNGSLVAFGKVQAFMATLITM------ 128

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G   IY+  R    G +  +          ++   + ++ +         
Sbjct: 129 ------LLLRGVTMIYMGGRPISTGFSDNADAFAEIGTGIWLGIPVPIWLMFALFALGWF 182

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +     +T +      +  N+ A       +   KL  FAVS     +AG    +    
Sbjct: 183 VL----TQTRMGRYIYALGGNESATALSGINVNKVKLFVFAVSGVLAALAGLIITSRLGS 238

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+     +GG   +        I+  +      ++   +  L+
Sbjct: 239 AQPTAGTGYELDAIAAVVVGGTSLMGGKGRIIGTLIGALIIGFLSNALNLLDIDSYYQLV 298

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 299 AKALVILAAVIL 310


>gi|160940518|ref|ZP_02087862.1| hypothetical protein CLOBOL_05413 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436478|gb|EDP14245.1| hypothetical protein CLOBOL_05413 [Clostridium bolteae ATCC
           BAA-613]
          Length = 287

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/272 (12%), Positives = 87/272 (31%), Gaps = 12/272 (4%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +  +   IY +    L+++ G + +++        +G Y   +L  + GL  ++ IP+ A
Sbjct: 10  NGIMVGGIYALIGMSLTLIFGVMKIINFCQGELLMLGMYISFVLFDQCGLDPFVAIPIVA 69

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           ++  A G ++    +           ++   +   IL +   +                 
Sbjct: 70  VVMFAFGALLQSTLITRSLHGNDDTNVLFLTVGLGILFQNVALL----------YFKSDY 119

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
            T +S+          +   +      + +  ++  +  +L+ T I    R    N    
Sbjct: 120 RTAQSMFSEKIVQLGAINLSLPKVLSFVILLAVTILLFAFLKYTNIGKQIRATSQNSTGA 179

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
                       + + + +A  G+ GA   +                    +V +GG+ S
Sbjct: 180 QVCGIKTKLVYATTYGLGAAIAGITGACLMSFYYV--FPTVGAVYGTRSFIVVTMGGLGS 237

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           +     +  +L  +  +   +    F   + F
Sbjct: 238 VIGAFVSGIVLGLMETVGAVVVGSSFKDTIVF 269


>gi|299132189|ref|ZP_07025384.1| inner-membrane translocator [Afipia sp. 1NLS2]
 gi|298592326|gb|EFI52526.1| inner-membrane translocator [Afipia sp. 1NLS2]
          Length = 291

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 106/307 (34%), Gaps = 27/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +  + + GL+I+ G+LG+L+L     + +G Y+  +  +  G  I  ++  
Sbjct: 11  LFNGLVLGALLALISSGLTIIYGTLGVLNLAHGAMFMLGGYAGYVAFTYTGSFIIAVLAG 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S  +  A  ++  +    F G       L+   I   I+   +      +    A +++ 
Sbjct: 71  SLFVMLAGVVMERVIIRYFYGRPDEDQLLVTFGIGICIVEIVRFFFGSLSLTVPAPKIFS 130

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T              F+ Y  +   ++  +     ++ L L RT +    R   ++  
Sbjct: 131 GIT-----------SLGFMYYPTYRLALVGIVTVALLALYLVLYRTRLGMIVRAGIEDSM 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    +  F + +   G AG   A                     ++++GG+
Sbjct: 180 MVSTLGINVFRVFMIVFGIGAMAAGFAGIVNAPVVSLTPDMGEAILVQT--FVVIVIGGV 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         I   ++ +   +N                    ++  A+ LV+++R H 
Sbjct: 238 GSFPGAILGGLIAGEIISITSMINPG--------------YAYVMLFAAMTLVLVLRPHG 283

Query: 339 LLRLRTP 345
           L   ++ 
Sbjct: 284 LFGSQSR 290


>gi|296105456|ref|YP_003615602.1| ribose transport system permease protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295059915|gb|ADF64653.1| ribose transport system permease protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 321

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 91/312 (29%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTMSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +  V A+ +    +   + +                   Q 
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAVLALGAAIGAVTGVIVAKGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        I     ++ + FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPVNTGFTDNADLFGWFGIGRPLGIPTPVWIMAIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGISVNKVKIIVYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|119873013|ref|YP_931020.1| inner-membrane translocator [Pyrobaculum islandicum DSM 4184]
 gi|119674421|gb|ABL88677.1| inner-membrane translocator [Pyrobaculum islandicum DSM 4184]
          Length = 321

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 109/306 (35%), Gaps = 31/306 (10%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS--- 99
              +  ++     +++ VG  G +    V   A+GAY   +    +     L +PV    
Sbjct: 27  IASVAFFMALGQAVNVFVGLTGYVDFGYVAFLAMGAYGLGVTIYYWPQLGLLALPVGLAL 86

Query: 100 -AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++     ++G  +L+ RG Y AIAT+ ++E  ++++I       G            
Sbjct: 87  GVAMAALLAAVVGAIALRLRGAYFAIATIGVNEGVKHLIIGANIWGGGA----------- 135

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +   F    +  +  +    +++   FL+   +  ++      A   IR ++ 
Sbjct: 136 GLILGTKMFSAFGRDLALTLANVGSPLLIIATGFLAVVAMYLIQAGKSGYALAAIRQDED 195

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA--SRDRISPDMFKFSENIIVISIVILG 276
           A  ++       KL AF  S++  G+ GA +    +      ++F     +  ++++ LG
Sbjct: 196 AAKAMGINPTKYKLLAFTTSASLSGLLGAAYYPLGNMQVFPENVFFIEYILDGLAVMFLG 255

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  +++       I   +  +                         +  + +FLV++   
Sbjct: 256 GAGTVTGPIVGGLIYFYLRSIIGVY--------------LPGYQALVTALLVFLVVVAMP 301

Query: 337 HSLLRL 342
             ++  
Sbjct: 302 RGIIGT 307


>gi|229166841|ref|ZP_04294589.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus AH621]
 gi|228616644|gb|EEK73721.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus AH621]
          Length = 286

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 116/292 (39%), Gaps = 31/292 (10%)

Query: 54  WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY---GLSIWLLIPVSAMISGACGMIM 110
               +++G  G++S    + + IGAY   +L  R     ++ ++ I  + ++S     I+
Sbjct: 1   MSFDVLLGYTGIVSFGHCMFFGIGAYGVALLFDRQGVSIMNFFIGIAAAIIVSAIVSYII 60

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
           G+ SL+ +  + A+ TL +S++F  +  KW+ +T+G  G        F            
Sbjct: 61  GMLSLRLKSHFYAMLTLAISQLFFVLAEKWRSLTHGGDGFTFRVPDIFRDRF-------- 112

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
                        YYV L        ++    +++I    + I  N++   +L   ++  
Sbjct: 113 -----------TFYYVTLICLISIFILLRLFTKSSIGKVLKAISQNEQRVEALGYKVLHY 161

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           K+ A  V+     ++G  F  +   ++  +F     +  + + ++GG+ +L         
Sbjct: 162 KIIASVVAGVVAAISGGLFVITLRFVNTTVFSIEMTLNALLMTMIGGVGTLI-------- 213

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              +       +  Y+ S L  +     R T ++ +   +V+L+    L+  
Sbjct: 214 -GAIAGAGIIESLKYYLSELASEYPIFERWTIILGLLYIIVLLVFPKGLVGT 264


>gi|209514995|ref|ZP_03263864.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209504621|gb|EEA04608.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 321

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 57/332 (17%), Positives = 119/332 (35%), Gaps = 29/332 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
           +K++           FL +           +  ++ I ++ +   + + G  GL+SL   
Sbjct: 2   NKLVLRSIPFVLFAAFLAIAPLVLGDGALHLVNEMFIIIVISSMWNFLAGYAGLVSLGHQ 61

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           + +  G Y   +  +  G+S +  IPV+ +       I+     + R  Y AIA+ +++E
Sbjct: 62  MYFGAGGYVLFMFANSAGMSPYAGIPVAFVFGACAAAIIAPALFRLRDAYFAIASWVVAE 121

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +    + K   +                   +  +         F  +E  M+ +   M 
Sbjct: 122 VVTISVQKTDALGG-----------------ISGVSLSDISGIDFTRFESQMFLIGGAMV 164

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L+    LWL R+    A+  +RDN+ A  ++   +   +  A+ +S+A    AGA    
Sbjct: 165 LLTVLGFLWLLRSKPGLAFMCVRDNELAARTIGVDVWRNRFLAYVLSAAGCAAAGALSCL 224

Query: 252 SRDRISPDMFKFSENIIVI-SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           S   + P     ++   ++  +V++GG+ +L      T I   + +L   +         
Sbjct: 225 SGLTVQPGNALSADWTAIMTFVVVVGGIGTLEGPILGTLIYFVLRQLLTVVLP------- 277

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                    +   M       +L     L  L
Sbjct: 278 ----LSGTWYLVAMGAVAVATMLYSPAGLWPL 305


>gi|145224381|ref|YP_001135059.1| inner-membrane translocator [Mycobacterium gilvum PYR-GCK]
 gi|315444713|ref|YP_004077592.1| urea ABC transporter membrane protein [Mycobacterium sp. Spyr1]
 gi|145216867|gb|ABP46271.1| urea ABC transporter membrane protein [Mycobacterium gilvum
           PYR-GCK]
 gi|315263016|gb|ADT99757.1| urea ABC transporter membrane protein [Mycobacterium sp. Spyr1]
          Length = 294

 Score = 60.7 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 91/291 (31%), Gaps = 27/291 (9%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI--WLLIPVSAMISGACGMIMGLPSLK 116
             G +G++++        G Y+  ++      +    +L  V   + G     +   +L 
Sbjct: 28  TFGQMGVINMAHGEFIMAGCYTAYVVQQVVSNAGVSLILSLVIGFLVGGAMGALLEVTLI 87

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
            R  +  + TL+++     IL +      G   + V   ++  G                
Sbjct: 88  QRMYHRPLDTLLVTFGVGLILQQVARDIFGAPAVNVIAPVWLSG----------GVEIFG 137

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
            +      ++L+      A +   L+ + +    R +  N+    +   +     ++ F 
Sbjct: 138 AVVPKTRIFILVLAIACVAVLAAVLKVSPMGRRIRAVVQNRDLAETSGISSRKTDITTFF 197

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           + S    +AG   A +    +      S  I    +V++GG+  +     A   L  +  
Sbjct: 198 IGSGLAAVAGV--ALTLIGSTSPTIGQSYLIDAFLVVVIGGLGQIKGTVIAAFALGFLNS 255

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                       ++ F     +             + +R   L  +RT S 
Sbjct: 256 FIEYNTTASLAKVIVFVIIVIV-------------LQVRPQGLFTVRTRSL 293


>gi|317401391|gb|EFV82025.1| inner-membrane translocator [Achromobacter xylosoxidans C54]
          Length = 292

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 100/304 (32%), Gaps = 24/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I S      +Y + A G  +     G ++     +  +GA          G  +   +P+
Sbjct: 7   IVSGLGLGSMYGLMALGFYLTYAVSGTVNFAQGSSMMLGAVLTFTFAQTLGWPLLAALPL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +    G+++   +++      + A L+ +     +L      T GK    +   L  
Sbjct: 67  ALALCALYGLVVERLAVRPFASRGSNAWLMSTVALGIVLDNLVMFTFGKEPRSLPSALAQ 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +  +          +        + L    L+A++    RRT    A   +  N  
Sbjct: 127 TPLEIGGM---------GLGVYPLQLLIPLVGLALAAALHALSRRTRWGVALLAVVQNPN 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +  A + AFAVS+ F G+AGA  A   +            +    + ILGG+
Sbjct: 178 AARLMGIPVRRAIMVAFAVSTLFAGVAGALVAPLFNV--QADMGTLFGLKAFVVAILGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS   +  A  +      L        +  ++ F               +  ++ MR + 
Sbjct: 236 TSAWGVMLAGLLFGVAEGLITVALGSGYTQIISF-------------ALVIAILAMRPNG 282

Query: 339 LLRL 342
           L   
Sbjct: 283 LFGR 286


>gi|295700396|ref|YP_003608289.1| sugar ABC transporter ATPase [Burkholderia sp. CCGE1002]
 gi|295439609|gb|ADG18778.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 342

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/311 (13%), Positives = 100/311 (32%), Gaps = 18/311 (5%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +     ++  +       A      I  +     +  + A   + V+   G + L+    
Sbjct: 33  LAFASLILLLVFFSFASPAFMQMDNILGILQATAVNGVLAIAATFVI-ITGGIDLSVGTL 91

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
               A    +  + + L +W+ +  +      CG I G  + K +               
Sbjct: 92  MTFTAVICGVFLTYWHLPMWMGVLAALATGAVCGTISGTLTAKMKIPPFIAT-------- 143

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
               +    +  G + +  AD+  +   T             + +  + +   +L + FL
Sbjct: 144 ----LGMMMLLKGLSLVVSADKPIYFTDTENFYRISQDSLIGYFLPSVPIPNAVLILFFL 199

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +    + L RTA+      +  N++A       +   K++ + V  A  G+AG   A+  
Sbjct: 200 AIVSSITLNRTALGRYTFALGSNEEAVRLSGVNVDRWKIAIYGVGGAICGIAGLLIASRL 259

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +   P + +  E   + ++VI      GG  ++        I+  +      M+      
Sbjct: 260 NSAQPALGQGYELDAIAAVVIGGTSLSGGSGTILGTIIGAFIMSVLTNGLRIMSVAQEWQ 319

Query: 309 LLKFDCSFNMR 319
           ++       + 
Sbjct: 320 IVVTGLIIILA 330


>gi|56477371|ref|YP_158960.1| transmembrane ABC transporter protein [Aromatoleum aromaticum EbN1]
 gi|56313414|emb|CAI08059.1| probable transmembrane ABC transporter protein [Aromatoleum
           aromaticum EbN1]
          Length = 304

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 103/304 (33%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+I+ G L +++ +    Y +GA+   I  +  G++ W+ +  
Sbjct: 25  LLIGFINGSFYAILSLGLAIIFGLLNIINFSHGALYMMGAFVAWIGLTYLGINYWVALVA 84

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ G  GMI+    LK       +  L+++     I+        G +G         
Sbjct: 85  VPVVVGIFGMIIERTMLKHLYRLDHLYGLLLTFGLALIIEGLFRYRFGISGESYPVP--- 141

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +    F   F+    +  +V+     +       + RT + +  R   +N +
Sbjct: 142 -------ELLSGGFNLGFMFLPKYRAWVIAVSLVVCFGSWYIIERTKLGSYLRAGTENPQ 194

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +    A    AG   A         +   +  I+V ++V++GGM
Sbjct: 195 LLQAFGINVPLMITLTYGFGVALAAFAGVLAAPVFQV--NPVMGSNLIIVVFAVVVIGGM 252

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L  +  L                  +      ++ + + +V+L+R   
Sbjct: 253 GSIMGSIVTGLGLGLIEGLTRVF--------------YPEASAVVIFVIMGIVLLLRPAG 298

Query: 339 LLRL 342
           L   
Sbjct: 299 LFGR 302


>gi|320104822|ref|YP_004180413.1| monosaccharide ABC transporter membrane protein [Isosphaera pallida
           ATCC 43644]
 gi|319752104|gb|ADV63864.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Isosphaera pallida ATCC 43644]
          Length = 335

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 98/310 (31%), Gaps = 21/310 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L  V+  +       +  +   + ++   I ++ + + G + V+   G + L+     
Sbjct: 7   ILLALVLVTVATAWNTESFLTPYNVKNLLNWIGLFGVISLGAAFVI-IGGGIDLSIGSVV 65

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     L  + GLS W+ IP+      A G++ G+     +     +    +     
Sbjct: 66  GLSACLLPWLLVKQGLSPWVGIPLVLAACAAIGLLHGVLITFVKLQPFVVTLCGL----- 120

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY--VLLGMCF 192
                      G A  +  D+    G     L    +   +  I     Y     L M  
Sbjct: 121 -------LCYRGLARWFTDDKEMGFGQGFTGLRDLVKSSVNLPIGGTVYYIPTTFLLMVA 173

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L+ +    L  T      + +  N++A            + ++ + S   G+ G  FA  
Sbjct: 174 LALAAAFLLNLTVAGRHLKAVGRNEQAARYSGVITPRVVIFSYVICSTAAGLGGMLFALD 233

Query: 253 RDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYF 306
            + + P  F     +  I+  ++GG        S+  +    AI+  +      M F   
Sbjct: 234 LNSVQPAGFGNFYELYAIAAAVIGGCSLRGGEGSVLGVVAGVAIIRLLFNSINLMGFPSQ 293

Query: 307 NSLLKFDCSF 316
                     
Sbjct: 294 LEFAVIGLVI 303


>gi|311103784|ref|YP_003976637.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310758473|gb|ADP13922.1| inner-membrane translocator 8 [Achromobacter xylosoxidans A8]
          Length = 330

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 55/294 (18%), Positives = 110/294 (37%), Gaps = 29/294 (9%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +RL     I+    +   L L     +  S  +        ++++  A  ++I VG  G 
Sbjct: 22  VRLRTRIAIIVFAGLAAGLALIPMATSNISFAFYL------MLWITMASAMNICVGFTGY 75

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           L    V+ Y +G+Y+  I     G  I   +  +  +  A  ++   P+L+ RG Y  I 
Sbjct: 76  LPFGYVVFYGVGSYATGICYKILGWPILPSLLAAGGVGVAIALL-LAPTLRLRGVYFGIV 134

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           +L ++ I + I+        G +                          S        YY
Sbjct: 135 SLALATIVKLIISNLPQSFTGGS---------------------MGIILSNANNPTHSYY 173

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            +L +   + + + WL  +++  A + IRD+  A   +   +   +L A+ +++ F  +A
Sbjct: 174 AMLAVMGATLATVTWLSVSSLGRALKAIRDDDGAAACVGIHVPNTRLKAWLLAALFPALA 233

Query: 246 GAFFAASRDRISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           G   A   + + P+  F        I   + GG  ++      T  L+G+  + 
Sbjct: 234 GGIEAWYTNVVDPEYAFHVLITAKSIIYAMAGGFGTILGPVVGTLALLGIDHVI 287


>gi|259415764|ref|ZP_05739684.1| inner-membrane translocator [Silicibacter sp. TrichCH4B]
 gi|259347203|gb|EEW58980.1| inner-membrane translocator [Silicibacter sp. TrichCH4B]
          Length = 355

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 87/315 (27%), Gaps = 20/315 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +L +   +   L      S   +  +  Q+ I  + A   ++++ + G + L+     
Sbjct: 45  LIVLVMSVVIFGLLLGAKFFSPFALTLILQQVQIVGVLALAQTLIILTAG-IDLSVGAIA 103

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       +   YG+   L + V   +    G + G    + +                
Sbjct: 104 VLCTVIMGKVTFDYGVPPVLSLLVGLTVGTCIGAVSGFLVSRVKLPPF------------ 151

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    I      +Y A+                   S   I        +  M  L+
Sbjct: 152 IVTLGMWQIVLATNYLYSANETIRAQDIEAQAPFLRFLGSILKIGGANFTLGVFAMLSLA 211

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   LR TA       I D+ +A       +    +S + ++      A         
Sbjct: 212 IVLAYALRHTAWGRHVYAIGDDPEAAELAGVDVHRTLMSVYMLAGLICAFAAWVMIGRFG 271

Query: 255 RISPD-MFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +SP        NI  I+ V++GG+       S+      T I+                
Sbjct: 272 SVSPSASTGLLGNIQAITAVVIGGVSLFGGRGSILGALFGTMIVGVFELGLRMAGADAQW 331

Query: 308 SLLKFDCSFNMRHTT 322
           + L            
Sbjct: 332 TYLLIGVLIIAAVAV 346


>gi|304397274|ref|ZP_07379153.1| inner-membrane translocator [Pantoea sp. aB]
 gi|304355423|gb|EFM19791.1| inner-membrane translocator [Pantoea sp. aB]
          Length = 368

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 88/299 (29%), Gaps = 9/299 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      + +    +   +  M   I I    A G++ V+ + G + L+      
Sbjct: 33  FIALILIVGFFAITVPDFLATGSLVIMVKHIAINAFLALGITFVIITAG-IDLSIGATLG 91

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L ++  +     I  +   S    + + L      G          +     
Sbjct: 92  LCGMIAGWLITKGIVLPMFGI--AIFPSVWVIVPIVLLIGALIGAGNGWIITRYNVAPFI 149

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             +    I  G A +  +    F G     L+    F        + + Y +  M  L+ 
Sbjct: 150 CTLGTMYILRGAA-MLTSGGETFPGLQGNPLLGNTGFDRIGAGTFLGLPYAIWMMVVLAL 208

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I    RR         I DN++A           K+  + +S     +AG    +    
Sbjct: 209 VIAYIARRLPFGRQVYAIGDNERAAELSGVKTRQVKILVYTLSGFCAAIAGIVVTSQLVA 268

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             P      E   + ++V+      GG  ++        ++  + +    M    F  +
Sbjct: 269 SHPANGTAFEMNAIAAVVLGGTSLAGGRGTIVGTLIGAFVIGFLADGLIMMGVSEFWQM 327


>gi|83589478|ref|YP_429487.1| inner-membrane translocator [Moorella thermoacetica ATCC 39073]
 gi|83572392|gb|ABC18944.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Moorella thermoacetica ATCC 39073]
          Length = 331

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 86/313 (27%), Gaps = 22/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              + +   +LL + +      + + ++ IQI I  + A G++ V+   G + L+     
Sbjct: 27  FIFVFLALCILLSILVPTFLLPQNLLNVLIQISINALLAIGMTFVI-ISGGIDLSVGSVA 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+                      + +        M    + F    + I    +S +  
Sbjct: 86  ALAGIV----------------VTALLKQYPSSTPMMYVIIIFSVLAVGIVCGGISGLAI 129

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L     I             +    +         F      Y   +  ++L M F  
Sbjct: 130 AKLNVEPFIATLAMLSIARGFAFVYTQSKPIFGLPPAFSWIGQGYIGPIPVIVLIMIFCL 189

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L +T        I  N++        +   KL  + +S     + G   A+   
Sbjct: 190 VIAHIVLSKTCFGRYIYAIGSNEEVAKLCGINVARVKLIIYVISGVLSALGGVALASRLA 249

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++V     + GG  S+ K       +  +      +    +   
Sbjct: 250 TGQPAAASGYELNAIAAVVLGGTSLSGGKGSIGKTIIGIMTIGVINNGLSLLQISSYWQS 309

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 310 ITMGLIIMIAVIL 322


>gi|261823717|ref|YP_003261823.1| ribose ABC transporter permease [Pectobacterium wasabiae WPP163]
 gi|261607730|gb|ACX90216.1| inner-membrane translocator [Pectobacterium wasabiae WPP163]
          Length = 322

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 95/312 (30%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLILIAVVSAMSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   +         ++  + +  +  +    G   G+   K +      ATL+M  + + 
Sbjct: 82  LTG-AVAASIVGLEVNALVAVFGALALGALIGAGTGVIVSKGKVQAFI-ATLVMMLLLRG 139

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + +   +    G                      F    +   + +   +  M  + A
Sbjct: 140 VTMVYTNGSPVNTGFSDVA---------------DAFGWFGIGRPLGIPTPIWIMAIVFA 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 185 ATWYMLHHTRLGRYIYALGGNESATRLSGISVDKIKIIVYSLCGLLSALAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|322833292|ref|YP_004213319.1| inner-membrane translocator [Rahnella sp. Y9602]
 gi|321168493|gb|ADW74192.1| inner-membrane translocator [Rahnella sp. Y9602]
          Length = 358

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/334 (13%), Positives = 105/334 (31%), Gaps = 43/334 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            N  +    +  +    LL      + S + +  +     I ++ A G ++V+     + 
Sbjct: 6   QNNRELTALMAIIALFALLGAMDRQSFSFQTLSMIFGSAQILMLLAMGATVVM-LTRNID 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA-- 125
           ++      + A +  +     G+++ L   ++       G+  G+     R   +     
Sbjct: 65  VSVGSVTGLCAVTLGV-LLNGGVNLPLACLLTLGTGLLAGIFNGVLVAWLRIPAIVATLG 123

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL +      ++   K I    AG+       FL  +                       
Sbjct: 124 TLGLYRGLMLLMTGGKWIEGLPAGLKSLSEPVFLNVSPLGW------------------- 164

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
               +  L A++   L RTA   ++  + DN +    L   +   ++ AF ++     +A
Sbjct: 165 ---LVIVLLAAMFWMLGRTAFGRSFYAVGDNLQGARQLGVAVNRVRILAFGINGMMAAIA 221

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCG 300
           G  FA+    +        E   + + V     +LGG  S+         L  +  +   
Sbjct: 222 GIVFASQIGFVPNQTGSGLEMKAIAACVLGGISLLGGTGSILGAVLGAYFLTQIDSVLVL 281

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +    +             +  +  + L  V++ 
Sbjct: 282 LRLPAW------------WNDFIAGLVLLAVLVF 303


>gi|85706578|ref|ZP_01037671.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseovarius sp. 217]
 gi|85668990|gb|EAQ23858.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseovarius sp. 217]
          Length = 295

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/311 (15%), Positives = 103/311 (33%), Gaps = 24/311 (7%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                +   +  +  L+Y +FA GL ++  +  + +L       +GAY  + L    GL 
Sbjct: 3   WVFLTELAINGALTGLLYSLFAIGLVLIYKASSVPNLAQGGLTMLGAYVVLALARDAGLP 62

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           +WL IP++A++    G  +   +L+       +  L+++      L        G     
Sbjct: 63  MWLAIPLAAVLMFGLGFGIERVALRRLAGRPVVMILMLTLGLDIFLRGTTLAIWGGTSRP 122

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           +   + +    +  +           +        +L              RT      R
Sbjct: 123 IELGVSYEPLFLGDIFISRIHLVGAGVALALFVAFMLFF------------RTRTGIKLR 170

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            I D+  A +S+  ++      ++A++S      G  +   +     D       +  ++
Sbjct: 171 AIADDYMASWSVGISVERGVGLSWALASVVALATGVIWGEIQ---GVDQALSLLLLKGLT 227

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           + +LGG+ S+     A  IL  +  +                         ++   L L 
Sbjct: 228 VAVLGGLDSILGAVIAGIILGIIENVGADFLDPLVGGG---------SRELIVAAVLILT 278

Query: 332 ILMRSHSLLRL 342
           +++R H L   
Sbjct: 279 VMIRPHGLFGR 289


>gi|148255157|ref|YP_001239742.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146407330|gb|ABQ35836.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 287

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 93/265 (35%), Gaps = 12/265 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+++ G L +++      Y +GA+    L +  G++ W  + +
Sbjct: 8   LLVGLINGSFYALLSLGLAVIFGMLNIINFAHGALYMMGAFCAYFLLNLGGINYWWALLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I G  GMI+    L++      +  L+++     I+        G +G+  A     
Sbjct: 68  APIIVGIFGMILERTLLQWLTGLDHLYGLLLTFGIALIVQGLFQNYFGSSGLPYAIP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                            F+   I+  +V++    +  +    + RT +    R   +N  
Sbjct: 125 -------DQLRGGMNLGFMFLPIYRGWVVVFSLIVCLATWFLIERTRLGAYLRAATENPT 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       + +      +AG   A         +      I+V ++V++GGM
Sbjct: 178 LVRAFGVNVPRMITLTYGLGVGLAALAGVLSAPINQV--RPLMGADLIIVVFAVVVIGGM 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNF 303
            S+         L  +  L      
Sbjct: 236 GSIMGSIITGFALGVIEGLTKYFYP 260


>gi|327438181|dbj|BAK14546.1| ribose/xylose/arabinose/galactoside ABC-type transport systems,
           permease component [Solibacillus silvestris StLB046]
          Length = 313

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/306 (8%), Positives = 89/306 (29%), Gaps = 25/306 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             +++ +   +  +   I ++  Q+ I  + A+G++ V+   G + L+     A+     
Sbjct: 22  IVIVITILNPSFMTTDNILNILRQVSISALIAFGMTFVI-LTGGIDLSVGSTLALTGAVA 80

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
             + +     +  ++    + +    +   + +      ++A              +   
Sbjct: 81  ATMLASGIDPVLTILAALLLGAILGAVNGVIIAKGKVAPFIAT-------------LATM 127

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            I  G   +Y   R         +     +     +   +    +         ++ + +
Sbjct: 128 TIYRGLTLVYTDGRPVSDLGNEITFQMLGKGYFFGIPVPVCTMILAF------IALYVIM 181

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            +T        +  N+ A       +   K++ ++++     ++     +  +   P   
Sbjct: 182 HKTTFGRRVYAVGGNEAASKLSGINVDRVKIAVYSLTGMLAALSALILTSRLNSAQPTAG 241

Query: 262 KFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
              E   + ++V     + GG   +        I+  +      +    F   +      
Sbjct: 242 TSYELDAIAAVVLGGTSLTGGKGWIFGTLVGALIIGVLNNGLNLIGVSSFFQQVVKGIVI 301

Query: 317 NMRHTT 322
            +    
Sbjct: 302 LIAVLI 307


>gi|311070103|ref|YP_003975026.1| ribose ABC transporter permease [Bacillus atrophaeus 1942]
 gi|310870620|gb|ADP34095.1| ribose ABC transporter permease [Bacillus atrophaeus 1942]
          Length = 321

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 50/324 (15%), Positives = 108/324 (33%), Gaps = 27/324 (8%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F     K    L L  +V  L++ +   +      I ++  Q+ I  + A+G++ ++   
Sbjct: 14  FDTVFQKLVPFLGLFILV--LIVSILNPSFLEPLNILNLLRQVAINALIAFGMTFII-LT 70

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+     A+ +     +         L + +  +I    GMI GL   K +     
Sbjct: 71  GGIDLSVGAILALSSALVAGMIVSGID-PILAVIIGCVIGAVLGMINGLLITKGKMAPFI 129

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
            ATL    +F+ + +                 +Y  G  +  L   + F      Y + +
Sbjct: 130 -ATLATMTVFRGLTL-----------------VYTDGNPITGLGTNYAFQLFGRGYFLGI 171

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
               + M    A + + L +T        I  N+KA       +   K+  ++++     
Sbjct: 172 PVPAITMVIAFAILWILLHKTPFGRRTYAIGGNEKAALISGIKVPRVKVMIYSLAGLLSA 231

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELC 298
           +AGA   +  +   P   +  E   + ++V     + GG   +        I+  +    
Sbjct: 232 LAGAILTSRLNSAQPTAGESYELDAIAAVVLGGTSLSGGRGRMIGTLIGVLIIGTLNNGL 291

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTT 322
             +    F  ++       +    
Sbjct: 292 NLLGVSSFYQMVVKGIVILIAVLL 315


>gi|311109815|ref|YP_003982666.1| inner-membrane translocator 76 [Achromobacter xylosoxidans A8]
 gi|310764504|gb|ADP19951.1| inner-membrane translocator 76 [Achromobacter xylosoxidans A8]
          Length = 291

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/303 (9%), Positives = 86/303 (28%), Gaps = 21/303 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +       Y++F+ GL+++ G + +++      + +      +           L   
Sbjct: 8   IMNSMQIAAAYILFSLGLTLIFGVMRIVNFAHGEFFTLPLLVMGVTVPFLVSEQLPLFAS 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+       +  L         L      M+  F   +     +        +    + 
Sbjct: 68  YALSGALGIALTLLLGGVIYKFALQRFQRDMTGSFVVSVGLSLLLQG------IFLESFG 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +             +    +      ++  +   +  + +  A R + ++ +
Sbjct: 122 GVPNKLPALVEGTVNILGAYITMQRLIITCCALLVAVLMCWTITSSRLGKALRAVSEDHE 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A            L+ F ++++   +A    +     +S  +      I     +++GG+
Sbjct: 182 AAMLQGIPYRRIALAGFFIATSLAAIAAVLLSPV--TVSSPVIGSDYLIRGFIAIVIGGL 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+      + ++  +  L        + +               M      V+L+R   
Sbjct: 240 GSIPGAILGSLLIAVIESLGGYYFDPTWAT-------------ITMFALTMFVLLVRPKG 286

Query: 339 LLR 341
           +L 
Sbjct: 287 ILG 289


>gi|265986180|ref|ZP_06098737.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1]
 gi|264658377|gb|EEZ28638.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1]
          Length = 277

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 105/277 (37%), Gaps = 29/277 (10%)

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              AY        +G+S  L + +  + + A G+++G  +++ +G Y  + TL ++++F 
Sbjct: 27  GGAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 86

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              ++                       ++ + R F F    +   + MYY +L +  L 
Sbjct: 87  FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 132

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              I  +  +      +++R+N+    SL  ++   KL+AF +S+   G+AG   A    
Sbjct: 133 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 192

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             +     +  +  VI + +LGG+ +L       A ++ +       +F           
Sbjct: 193 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 243

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 T +  +     +L+    ++     S   ++
Sbjct: 244 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 274


>gi|326204422|ref|ZP_08194280.1| inner-membrane translocator [Clostridium papyrosolvens DSM 2782]
 gi|325985454|gb|EGD46292.1| inner-membrane translocator [Clostridium papyrosolvens DSM 2782]
          Length = 338

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/295 (14%), Positives = 108/295 (36%), Gaps = 28/295 (9%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            K    + ++  V  ++  L      +   + ++  Q+ +  + A+G +I++   G+L L
Sbjct: 12  AKKKYSIFMVLFVLFIICSLANPNFLTTSNLTNISRQLAVTTILAFGQTILI-ISGMLDL 70

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+    + I   +   S+ + + V  +    C  I  L    F+      ATL 
Sbjct: 71  SQGSVLALSG-VFAISAYKATGSLVIAVLVGIITGVVCNFINALMISTFKAPPFI-ATLA 128

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           M  + + + + +    N                    +++  +F          +   ++
Sbjct: 129 MLTMARGVALLYTKGQN--------------------ILQLDKFVVFGQGSVGVIPIPII 168

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  L+      L+ T +  +   +  N++A  +    +   K +AF ++  F+G+AG  
Sbjct: 169 FLVVLAIVTWYILKHTRVGRSLYAVGGNEEASVASGINVHKVKYTAFIINGIFVGLAGVL 228

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           F +  +   P+     E   + + +I      GG+ + +       I+  +  + 
Sbjct: 229 FMSRVNAGLPNGAVGYEFTALTAAIIGGTSFSGGVGTATGTLAGAFIVGFLDNIM 283


>gi|238025177|ref|YP_002909409.1| inner-membrane translocator [Burkholderia glumae BGR1]
 gi|237879842|gb|ACR32174.1| Inner-membrane translocator [Burkholderia glumae BGR1]
          Length = 344

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/296 (15%), Positives = 101/296 (34%), Gaps = 13/296 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K+  +  L+A+V          A  S   + ++ +Q+          + V+   G + 
Sbjct: 24  IQKFAALGSLVALVIAF--SAASPAFFSVDNLMTVCLQVTSIAYLGVAATCVI-IAGGID 80

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+   S  +L          ++    ++ GA   I+    +   G    IATL
Sbjct: 81  LSVGSVLALAGVSAALLTKSGVPVPVAMLC--GVLVGALCGIVNGICVTRMGLPPFIATL 138

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            M  + + + ++                L        + I    FP    +    + Y +
Sbjct: 139 GMMLVARGLALQITGARPVSDLGDAFGTLGNGALFRIARIGADGFPD---VTFPGIPYPV 195

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + M  L   + + L +T++      +  N +A       +    L  + +S A  G+ G 
Sbjct: 196 VVMVVLFVGVSVLLSKTSLGRHIYAVGSNAEAARLSGVDVRGVTLFTYVLSGAMAGVTGC 255

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
              +      P+     E   + S VI     +GG+ ++S  A  + ++  +    
Sbjct: 256 ILMSRLVTGQPNEGVMYELDAIASSVIGGTSLMGGVGTISGTAIGSFVIGVLRNGL 311


>gi|254501780|ref|ZP_05113931.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222437851|gb|EEE44530.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 317

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 95/301 (31%), Gaps = 16/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y + A G  ++  + G+ +        + A   ++     G+  +L + ++  +
Sbjct: 28  FVAGILYALIALGFVLIFKASGVFNFAQG-IMVVFAGLTLVGLHENGVPAYLALLLTIGV 86

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
            G     +    ++   +   I  L+ +      LI +     G     +  +   L T 
Sbjct: 87  MGVLAYSVERVVMRPLVNQPDIILLMATIGLTYFLIGFGEFVFGGEPKQMITQELGLPTG 146

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             +     R        +I    + + M      + L+  +T I  A R + D+ +A  S
Sbjct: 147 STAFEFGERGLVILQHIDIAAAVIAVIMVAS---LGLFFNKTRIGRALRAVADDHQAALS 203

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +  ++       +  +       G  + A                  + ++ILGG TS+ 
Sbjct: 204 VGISLNQIWAIVWFAAGLVALATGIMWGARS---DVSFALEIVAFKALPVLILGGFTSIP 260

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  I+    ++            ++           L  I   + +L R   L   
Sbjct: 261 GAIVGGLIIGFGEKIGELYWGGLVGGGIESW---------LAYIIALIFLLFRPQGLFGE 311

Query: 343 R 343
           +
Sbjct: 312 K 312


>gi|209520118|ref|ZP_03268892.1| Monosaccharide-transporting ATPase [Burkholderia sp. H160]
 gi|209499437|gb|EDZ99518.1| Monosaccharide-transporting ATPase [Burkholderia sp. H160]
          Length = 329

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 90/309 (29%), Gaps = 23/309 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+             S + +  +  Q ++  + A G +++V   G + L+C +  A
Sbjct: 28  LIALVLACAFFISQSSRFLSFQNLSLILQQTMVVAVIAIGQTLIV-LTGGIDLSCGMVMA 86

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            G+          G+   L I      S   G++ GL   + +     +    ++  F  
Sbjct: 87  FGSIIMTKFAVVLGVPPVLAILCGIGASTLFGLLNGLLITRIKLPAFIVTLGTLNIAFAL 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             I                      +          F ++F +    + Y  +    +  
Sbjct: 147 TQIY-----------------SNAESVSNLPDAIMFFGNTFSVGPAEVTYGTVLTLLMYL 189

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    LR T        + +N +A   +  +     L  + ++ A  G+A     +    
Sbjct: 190 ATWFVLRDTVPGRHLYALGNNAEAARLMGLSSQKILLIVYTLAGAIYGIAALLSVSRTGV 249

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P   +      + ++V+      GG  S+        I+         +       +L
Sbjct: 250 GDPQAGQTENLDSITAVVLGGTSLFGGRGSIVGTLLGALIVGVFRNGLTLIGVSSVYQVL 309

Query: 311 KFDCSFNMR 319
                  + 
Sbjct: 310 ITGMLVILA 318


>gi|116749571|ref|YP_846258.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
 gi|116698635|gb|ABK17823.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
          Length = 292

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 50/305 (16%), Positives = 93/305 (30%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y     G S+V G +G+++L       IGAY      + +GL  +L IP+
Sbjct: 8   IINGLLLGGLYATATIGFSMVWGVMGVINLAHGAFIMIGAYVGYWAFAHFGLDPFLTIPL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S  +    G ++    L        + +LI++       I    +               
Sbjct: 68  SMAVLFVIGYLLQELLLNRVMRTSLLLSLILTFGLDMFFINVVILLFSSDFHS------- 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V +                           L+    L+LRRT   +A      +++
Sbjct: 121 ----VNTSYTGSSLKVGTAFIPYVRLLTFTFALILAGGFYLFLRRTRAGHAILATALDKE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           F   +A  G AG+  +           +F     V  I +LGG+
Sbjct: 177 TARLMAINPSRVYSLTFGAGAALAGAAGSLASMLFPISPIMGREFIG--AVFVITVLGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  +   +  L   +                     +  I   L++++R   
Sbjct: 235 GSVEGCVLAGLLYGLIQALASLVLG-------------VSYQNIVAFIIFLLILVLRPQG 281

Query: 339 LLRLR 343
           L   R
Sbjct: 282 LFGKR 286


>gi|310815820|ref|YP_003963784.1| branched-chain amino acid ABC transporter, permease protein
           [Ketogulonicigenium vulgare Y25]
 gi|308754555|gb|ADO42484.1| branched-chain amino acid ABC transporter, permease protein
           [Ketogulonicigenium vulgare Y25]
          Length = 447

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 48/273 (17%), Positives = 97/273 (35%), Gaps = 20/273 (7%)

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + L  PV A+++ A   ++G  +L  R DYLAIATL ++EI   ++     ++ G   +
Sbjct: 175 PVVLSWPVGALMAAAVAWVIGKITLGLRSDYLAIATLGIAEIILAVMKNEDWLSRGVKNV 234

Query: 151 YVADRLYFLGTTVRSLIRF---------FRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
               R       +++   F             +S V   +    +   +  +   +    
Sbjct: 235 NGIPRPVPYELDLQNSPEFVAAAANLGMNAVTASTVFVRLNYSLMFAAVVIVLLVLAQLA 294

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
             +      R IRDN+ A  ++   +    L  F + S   G+AGA  A    ++    +
Sbjct: 295 LNSPWGRMMRAIRDNENAAGAMGKDVKKRHLQIFVIGSGLCGLAGAMMATMDGQLVMSSY 354

Query: 262 KFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK--------- 311
           +      ++  +VI+GG  +         ++  +  +   ++      +           
Sbjct: 355 QPLRFTFLIWVMVIVGGSGNNFGAVLGGMLVWWLWVMVEPISQQLVGYITAAMPEGWLRG 414

Query: 312 -FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                       LM + L LV+      LL  +
Sbjct: 415 RLTDVAPHTRLFLMGLLLLLVLRFSPRGLLPEK 447



 Score = 41.8 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/179 (10%), Positives = 50/179 (27%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           ++ G   +      +    LI  + A G+++  G  GL ++  +   A+G    V+    
Sbjct: 27  VWTGWAYNANLALIILNMGLISAVMALGVNLQWGYAGLFNIGVMGFVALGGLGAVLTAMP 86

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             +  W    +  +I    G    + ++             +      ++          
Sbjct: 87  PTIDAWQAGGLRIVIGLFIGGATIVIAVMTYQRLPTGPRRGLITTAIVLVGYALFRFVYV 146

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            G    + +    T     +      +  V+    +  ++          I    R+  
Sbjct: 147 PGTQAVEAVNPSSTGYLGGLGLPVGLALPVVLSWPVGALMAAAVAWVIGKITLGLRSDY 205


>gi|319784906|ref|YP_004144382.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170794|gb|ADV14332.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 302

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 92/317 (29%), Gaps = 20/317 (6%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY-----VILGSRY 88
            S +++    +   +  + A G+++    L   +       A G Y+       I  +  
Sbjct: 1   MSLQFVVDGLLTGSMIGLGAIGVTLTYSILRFSNFAHGDFMAWGTYATLAVVSAIGATVG 60

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            ++    +     +  A  + M   +L        + + + S+    I++      +   
Sbjct: 61  KVAPIAPLSFGWPLIVALVVGMAFTALLALLLDKVLFSRLRSQGQAIIVVMASFGASMAL 120

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
              +        T     I+        +        +LL    L  ++ L + RT    
Sbjct: 121 RSLLEFTFTSRPTYFSRAIQIAMPVGFGIRITSDQIALLLLTAVLVLAVHLLMTRTQTGR 180

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           + + +  N      +   +       + +  A   +AG                F   + 
Sbjct: 181 SMQALSQNAALARIVGIDVASVVRVTWVIGGALACVAGVMIGILVQI--RPFMGFDMLLP 238

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           + +  ILGG+ S+        I+         +    + + + F             I L
Sbjct: 239 MFAAAILGGIGSIPGAVLGGLIIGLAEAGAVQLIGAEWRAAVSF-------------IIL 285

Query: 329 FLVILMRSHSLLRLRTP 345
             V+ +R   L  +R  
Sbjct: 286 MAVLFVRPIGLFGVRER 302


>gi|260567790|ref|ZP_05838259.1| branched-chain amino acid ABC transporter [Brucella suis bv. 4 str.
           40]
 gi|261753906|ref|ZP_05997615.1| inner-membrane translocator [Brucella suis bv. 3 str. 686]
 gi|260154455|gb|EEW89536.1| branched-chain amino acid ABC transporter [Brucella suis bv. 4 str.
           40]
 gi|261743659|gb|EEY31585.1| inner-membrane translocator [Brucella suis bv. 3 str. 686]
          Length = 257

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 105/277 (37%), Gaps = 29/277 (10%)

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              AY        +G+S  L + +  + + A G+++G  +++ +G Y  + TL ++++F 
Sbjct: 7   GGAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 66

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              ++                       ++ + R F F    +   + MYY +L +  L 
Sbjct: 67  FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 112

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              I  +  +      +++R+N+    SL  ++   KL+AF +S+   G+AG   A    
Sbjct: 113 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 172

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             +     +  +  VI + +LGG+ +L       A ++ +       +F           
Sbjct: 173 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 223

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 T +  +     +L+    ++     S   ++
Sbjct: 224 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 254


>gi|119946433|ref|YP_944113.1| inner-membrane translocator [Psychromonas ingrahamii 37]
 gi|119865037|gb|ABM04514.1| inner-membrane translocator [Psychromonas ingrahamii 37]
          Length = 338

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 45/327 (13%), Positives = 100/327 (30%), Gaps = 28/327 (8%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           + FSLRL      +  + ++  +   +  G   S   +  +  Q  I  + A G++ V+ 
Sbjct: 23  NKFSLRLMLKTVGMLPVLIILCIGFEMLSGRFMSWSNLSIVAQQASINTVLAAGMTFVI- 81

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G + L+     A  A    ++ S++     L IP + ++    G++ G      +   
Sbjct: 82  LTGGIDLSVGSILAASAMV-AVIVSKFPELGMLGIPAALLVGTFFGLLNGSLIAYLKLPP 140

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
             +    ++ +     +                    +G           F         
Sbjct: 141 FIVTLGALTAVRGIARL--------------------MGNDTTVFNPDMPFDFIGNGTLF 180

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            + ++++   F+       L+RT +     ++  N+ A       +    L A+ +S   
Sbjct: 181 GIPWLIIIAFFVVIVSWFILKRTVLGIHIYSVGGNENAARLSGIKVAGVLLFAYGMSGLL 240

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVV 295
            G+ G   AA     +      +  +  I+ VIL      GG+ S+        I+  + 
Sbjct: 241 SGLGGVMSAARLYAANGTQLGTAYELDAIAAVILGGTSFVGGIGSIWGTLIGALIIAVLT 300

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                         +            
Sbjct: 301 NGLVLTGVPDVWQYIIKGLIIIGAVAL 327


>gi|296268394|ref|YP_003651026.1| inner-membrane translocator [Thermobispora bispora DSM 43833]
 gi|296091181|gb|ADG87133.1| inner-membrane translocator [Thermobispora bispora DSM 43833]
          Length = 297

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 93/303 (30%), Gaps = 17/303 (5%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +       Y + A G S+V G + LL+      Y +GA++           +   + +  
Sbjct: 7   NGLFVGSFYALVALGYSMVYGIIKLLNFAHGDIYMLGAFA-GFAILGATGGVSPDMQLPL 65

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           ++      +          + +A   L  +     ++       + + G+ V        
Sbjct: 66  LLGVLVVTMGFTGMCGVLLERIAYRRLRSAPRLSLLITAVGASFSLEYGVRVIAGPDPQV 125

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             VR  +             +    +++    L  ++ L + R+    A R I  + +  
Sbjct: 126 YPVR--LGGTTIHVLGASITVQQIVLMVVAVALMVALNLLVTRSREGRAMRAIALDPRTS 183

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             +   +       F + SA  G AG    A   +I   M  F   +   +  ++GG+ +
Sbjct: 184 ALMGINVNAVIARTFFLGSALAGAAGVMAGAYYGKIDF-MMGFLIGLKAFTAAVIGGIGN 242

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +        +L  +           +  +  F               L L + +R   LL
Sbjct: 243 IPGTMLGGLLLGMLESFGTYWLGGEWRDVFAFG-------------VLILFLTVRPTGLL 289

Query: 341 RLR 343
             R
Sbjct: 290 GER 292


>gi|222869883|gb|EEF07014.1| predicted protein [Populus trichocarpa]
          Length = 342

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 56/188 (29%), Gaps = 14/188 (7%)

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +RF       +        +++    L   + L++R + +  A R    +      
Sbjct: 24  LPGALRFGAEGGFEIYVPYSRILIIVVAIVLMVLLTLYIRHSRMGRASRACAQDMHMASL 83

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L           F + +    + G   A +  +++P    F   I   +  +LGG+ S+ 
Sbjct: 84  LGIDTNRVISFTFVLGAMLAAVGGVLIALAVGKLNPF-IGFLAGIKAFTAAVLGGIGSIP 142

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  +L              +  ++ F               L L++L R   LL  
Sbjct: 143 GAMLGGVLLGVAETFAAAYISSEYKDIVAFG-------------LLVLILLFRPTGLLGK 189

Query: 343 RTPSNFLE 350
                 L 
Sbjct: 190 PEVEKLLR 197



 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 53/120 (44%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++   LL        + +    +    +IYVM   GL+IVVG  GLL L  V  YA+GAY
Sbjct: 223 LILAALLIAVSWPFFAGRNAVDIATLAMIYVMLGLGLNIVVGFAGLLDLGFVGFYAVGAY 282

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +Y +L    G S W  +P++   +   G ++G P L+ R           S   +    +
Sbjct: 283 TYALLFHWAGWSFWEALPLAGAAAAMFGFVLGFPVLRLRASRAGRTASPASPSPRCWAWR 342


>gi|118471109|ref|YP_885759.1| ribose/xylose/arabinose/galactoside ABC-type transport systems,
           permeases [Mycobacterium smegmatis str. MC2 155]
 gi|118172396|gb|ABK73292.1| ribose/xylose/arabinose/galactoside ABC-type transport systems,
           permease components [Mycobacterium smegmatis str. MC2
           155]
          Length = 372

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/315 (11%), Positives = 89/315 (28%), Gaps = 21/315 (6%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            IL +L ++      L      S      +   + ++ +   G++ V+ + G + L+   
Sbjct: 41  WILGVLVLICLFFSVLAGDRFLSAGNFSLISQNVAVWAVLGVGMTFVIITAG-IDLSVGS 99

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
                +     + +  G +   +     + +   GM  G  +          A ++    
Sbjct: 100 VLVFSSVVAAKVMAAMGGNGPGVAAAGLVAAVLSGMAWGALNGVLVAKARVPALIVTLGT 159

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
               L   + IT G     V   L                  + V+    + +V L +  
Sbjct: 160 LSVALGLAQVITGGIDIRSVPAELTDFSAY------------TKVLGIPGLPFVALIILI 207

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +   ++    +T        I  N +A       +    ++ +A++    G+      A 
Sbjct: 208 VGGILL---HKTRFGRYTYAIGSNAEAARRTGIKVTRHLIAVYALAGTLAGIGALLSLAQ 264

Query: 253 RDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
               +      +   ++ ++V     I GG  ++        I   +      +    + 
Sbjct: 265 FGTTTIAGQSLTNLNVIAAVVIGGTSIFGGEGTIFGTVVGLFIPAVLQSGFVIIGVQPYW 324

Query: 308 SLLKFDCSFNMRHTT 322
             +            
Sbjct: 325 QGVAVGSVLIAAVYV 339


>gi|54023840|ref|YP_118082.1| putative branched-chain amino acid transporter permease [Nocardia
           farcinica IFM 10152]
 gi|54015348|dbj|BAD56718.1| putative branched-chain amino acid transporter permease protein
           [Nocardia farcinica IFM 10152]
          Length = 337

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/315 (11%), Positives = 91/315 (28%), Gaps = 29/315 (9%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL------------- 90
               IY + A G ++V G L L++      + +G +  ++    +G              
Sbjct: 29  TYGSIYALVAVGYTLVYGVLRLINFAHSEIFMLGMFGQLVGLMIFGFSAGPDVYDQGVVL 88

Query: 91  ---SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
               + L + V  ++SG   + +   + +      A     +        +  + +    
Sbjct: 89  TVVYLGLAMVVGMVVSGGAAVGLERVAYRPLRRRGAKPLAFLITAIGMSFVLQEFVHFIL 148

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
             I            ++ +    +F             +++    L+ +  + + RT   
Sbjct: 149 PKIDPDLGGTNAQQPIQLVEPTVQFSFGGADVTNIAILIVVAAVVLALATEMLINRTKFG 208

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
              R +  +      +  +     +  F +     G A   +A            F   I
Sbjct: 209 RGIRAVAQDPDTATLMGVSRERVIMLTFLIGGLLAGAAATLYAIKIPPAIIYSGGFILGI 268

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              +  +LGG+ +L        +L  V +    +    +  ++ F     +         
Sbjct: 269 KAFAAAVLGGIGNLRGALLGGLLLGIVEQYGQILLGIEWRDVVAFVVLVAVL-------- 320

Query: 328 LFLVILMRSHSLLRL 342
                ++R   +L  
Sbjct: 321 -----MVRPTGILGE 330


>gi|330888385|gb|EGH21046.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 338

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/341 (12%), Positives = 84/341 (24%), Gaps = 40/341 (11%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL--- 84
           + +       +   +  + L     A G+ ++ G  G+LSL   I + +G+Y   +    
Sbjct: 1   MVVLPLLLGDFRLGLAGKYLSLAFCAVGMVMIWGYGGILSLGQGIFFGLGSYMMAMYLKL 60

Query: 85  -------------GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                                  +I  S              +       +  A L    
Sbjct: 61  EATATDEAASALAAFYGSALPDFMIWNSVEALPWWWKPFESATFTLAAILILPALLAFLF 120

Query: 132 IFQNILIKWKPITNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
            +     +   +                I            +      F           
Sbjct: 121 SYAYFKKRVGGVYFSIITLSLASIMSIMIIGQQGYTGGVNGLTDFKTAFGMSLQAPQTPW 180

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +Y +   +   S ++  ++ R+ +      IRD +             K   FAV++  
Sbjct: 181 ILYLITTLLLLASVAMCGFILRSRLGKVVVAIRDREDRVRFSGYNTALFKAFIFAVAALI 240

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
             + G  F       SP +     +  ++    LGG  SL      T ++          
Sbjct: 241 SALGGVMFTLQVGLASPSLVGIIPSTEIVIYAALGGRLSLVGAVYGTLLIGAAKTYLSE- 299

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                        +F       +      V+L     L  L
Sbjct: 300 -------------NFVSFWQYFIGFLFMAVVLFLPTGLAGL 327


>gi|307729748|ref|YP_003906972.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|307584283|gb|ADN57681.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
          Length = 289

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 76/282 (26%), Gaps = 17/282 (6%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
               V+ A GL+++ G +G+++L        GAY  +I   R       ++  +   + A
Sbjct: 18  FAYLVLAALGLAVIFGMMGVINLAHGEFIMCGAYVTIIAAKRGVPLPLAMLLGAIAAALA 77

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
             ++  L                    +  +             +     L    +    
Sbjct: 78  GVIVERLVIRHL---------------YNRLFDSVVATWAISLIVQQTMLLVAGPSMEGI 122

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
              F  F      +  +   + L    +   + L   RT      R    N      L  
Sbjct: 123 GTPFGSFSVGDYSFSTYRALLPLIALAILFGLYLLFFRTNYGVCARATIQNANIAQCLGL 182

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                    FA+ +   G+ GA +A +   +      F         V++GG   ++   
Sbjct: 183 RTDRLYTLTFALGAGLAGLTGALYAPTMTAVPTMGSNFIVQ--AFVSVVVGGANVIAGTT 240

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            A  +L  +           F  +        +       + 
Sbjct: 241 PAAGVLAIIQTALTASYGQLFGQIGLLVTVIVVIRLLPQGLG 282


>gi|157376267|ref|YP_001474867.1| inner-membrane translocator [Shewanella sediminis HAW-EB3]
 gi|157318641|gb|ABV37739.1| inner-membrane translocator [Shewanella sediminis HAW-EB3]
          Length = 297

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 88/306 (28%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  I  L+Y +      +V  S  +++        +GA+          L   +   +
Sbjct: 10  IINGLIVGLLYGVVGMCFVLVYKSTQIVNFAQGEFLLVGAWVCWAFLIYMELPFVVGFLL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G+++ +  L+       I+ ++++               G +          
Sbjct: 70  TLCFMALFGVLLQMIVLRPMIGEPIISVIMVTIGLSIFFQSLTKWIFGVSPQSYP----- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +          +  E+      +    +      + + +    A R    +Q+
Sbjct: 125 ------KVFDTHSISLFGLNVELAYLMSTVIALCIMVGFFFFFKYSKHGLAMRATAFDQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  ++      ++ +++     AG                 +  I V   VILGG+
Sbjct: 179 VAQSLGISVKQVFAMSWGIAATVSATAGVVIGMVNGVSDSLS---AIGIKVFPAVILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +  +    +  Y +            +       L +++  + + 
Sbjct: 236 DSIVGAIVGGVIIGVLENVAEFFDSQYLH--------IGNMYDIAPFYVLLVILWFKPYG 287

Query: 339 LLRLRT 344
           L   R 
Sbjct: 288 LFGTRD 293


>gi|254710814|ref|ZP_05172625.1| hypothetical protein BpinB_11196 [Brucella pinnipedialis B2/94]
 gi|261318380|ref|ZP_05957577.1| inner-membrane translocator [Brucella pinnipedialis B2/94]
 gi|261297603|gb|EEY01100.1| inner-membrane translocator [Brucella pinnipedialis B2/94]
          Length = 256

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 105/277 (37%), Gaps = 29/277 (10%)

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              AY        +G+S  L + +  + + A G+++G  +++ +G Y  + TL ++++F 
Sbjct: 6   GGAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFF 65

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              ++                       ++ + R F F    +   + MYY +L +  L 
Sbjct: 66  FFCLQASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLG 111

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              I  +  +      +++R+N+    SL  ++   KL+AF +S+   G+AG   A    
Sbjct: 112 VFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQ 171

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             +     +  +  VI + +LGG+ +L       A ++ +       +F           
Sbjct: 172 FATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV--------- 222

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                 T +  +     +L+    ++     S   ++
Sbjct: 223 ------TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 253


>gi|90425642|ref|YP_534012.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90107656|gb|ABD89693.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 315

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 52/318 (16%), Positives = 111/318 (34%), Gaps = 26/318 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +  ++  + A GL+++   LG+L+      Y +GA+    +   +    W  + ++
Sbjct: 10  LNGVLYGMLLFLMASGLTVIFSMLGVLNFAHASFYMLGAFFGFQISRWF--GFWPALLIA 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++GA G  +    L+       +A L+ +      + +   I  GK+ +         
Sbjct: 68  PLLAGAIGAAVERYGLRRVHKNGHVAELLFTFGLAFAIEEIVQIIWGKSPVDFRVPPL-- 125

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                  + F  F      Y  F  ++LL    +   ++L L++T I    +    +   
Sbjct: 126 -------LDFPAFTLFSTNYPAFKMFMLLVSVAIFLGLLLALKKTRIGLIVQAALTHPHM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L   +    +  F V +A   +AG     +   ++          I+  +V++GG+ 
Sbjct: 179 VGHLGHNVGRIFMLVFGVGTALAAVAGVIAGPAL--VTQSNMAGLLGPILFVVVVVGGLG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT-------------TLMVI 326
           SL     A+ ++  +      MN      L                          +  +
Sbjct: 237 SLPGAFIASLLIGLLQTFAVSMNASLAGLLGPLSPDLAQSWLSDIWNVTIAQIAPIMPYL 296

Query: 327 ALFLVILMRSHSLLRLRT 344
            L LV++ R   LL  R 
Sbjct: 297 LLVLVLIFRPMGLLGTRD 314


>gi|317401334|gb|EFV81971.1| ABC branched chain amino acid family transporter [Achromobacter
           xylosoxidans C54]
          Length = 290

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/284 (11%), Positives = 76/284 (26%), Gaps = 13/284 (4%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               +IY + A+G  +   + G L+     A  +GA   + L         ++  V    
Sbjct: 11  IALGMIYAVIAFGYQLTFATSGTLNFGQGEALMLGALVGLTLVGLGVNYWVMIPIVCIFG 70

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                ++  +              ++ +     I         G                
Sbjct: 71  FAQGALVERVGVRPAIKTRSEFGWIMATIALGIIFKNVAENIWG-----------RDDLR 119

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             S +                  V+ G   +   + L+ R++    A+    +++ A   
Sbjct: 120 FPSPLPEAPIEVLGANVLPMELLVVFGALAMMLLVELFNRKSIYGKAFVATSNDRDAAGL 179

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +          ++A+SS     AG   A     ++         +   ++ I+GG++S  
Sbjct: 180 MGINTGMVITFSYALSSLTAAFAGVLVAPL--TLTGATMGAVLGLKAFAVAIIGGLSSGM 237

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            +     IL              +  +        +       +
Sbjct: 238 GVVVGGLILGIAETTTGFYLSTGYKDVPGLVLLLLVLTFKPAGL 281


>gi|271964459|ref|YP_003338655.1| leucine/isoleucine/valine transporter permease [Streptosporangium
           roseum DSM 43021]
 gi|270507634|gb|ACZ85912.1| leucine/isoleucine/valine transport system permease protein
           [Streptosporangium roseum DSM 43021]
          Length = 322

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 49/316 (15%), Positives = 95/316 (30%), Gaps = 27/316 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS-----------YVILGSRY 88
                   IY + A G ++V G L L++      + IG +              + G   
Sbjct: 14  IDGLAFGSIYALIALGYTMVYGVLRLINFAHSEVFMIGTFGAMFVPFVLGINSALTGLAL 73

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              I  +I    + S    + +   + +   +     +A LI +      L +   +   
Sbjct: 74  VGVIIAMILAGMLASAGTAIALEQIAYRPLRKRGASRLAALISAIGASIFLQELFALLVI 133

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                   +        R + R   F        +    V++    +  ++   + RT I
Sbjct: 134 PEVFNRPQQGRIQMGLPRLMERTELFSIFGHSVRVDQVLVIVAAIGMMIALDALVNRTKI 193

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R    N +A   +   I       F +     G+AGA +  S +  +     F   
Sbjct: 194 GRGIRATAQNPEAAVLMGVDINKIVRMTFLIGGGMAGVAGALYLISYEN-TNYYIGFLFG 252

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I   +  +LGG+ +L        +L  V           +  ++ F              
Sbjct: 253 IKAFTAAVLGGIGNLRGALVGGVVLGLVENYGAIFFGSDWKHVISFT------------- 299

Query: 327 ALFLVILMRSHSLLRL 342
            L LV++ R   +L  
Sbjct: 300 ILVLVLMFRPTGILGE 315


>gi|160898750|ref|YP_001564332.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160364334|gb|ABX35947.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 317

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 52/319 (16%), Positives = 115/319 (36%), Gaps = 27/319 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M + GL+++   +G+L+      Y +GAY          +  W  + V
Sbjct: 10  LLNGVSYGLLLFMLSSGLTLIFSMMGVLNFAHTSFYMLGAYFGY--TLSGIIGFWGALFV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ GA G +    SL+    Y  +  L+++     ++++   +  G+  +        
Sbjct: 68  APLLVGALGAMFERYSLRRVHKYGHVPELLVTFGLSYLILEVVQLVWGRGTVPYGLPPA- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   ++   F      +     +V+L    +  ++ L L RT I    +    N +
Sbjct: 127 --------LQGPLFTLYGTQFPRSRSFVMLLALLMLVAVWLLLTRTRIGLVIQAALKNPE 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    +  F    A  G+AG         ++      S   I+  +V++GGM
Sbjct: 179 MVEALGHNVPRVFMMVFGGGCALAGLAGVIGG--NTYVTEPAMAMSVGSIIFVVVVVGGM 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFN--------------SLLKFDCSFNMRHTTLM 324
            SL+    A+ ++  V      +++   +                     + +     L 
Sbjct: 237 GSLAGAFVASLLIGVVQTFAVAIDWSLASLLSSLGSPVGEQTFGWPLLKLTISQVAPILP 296

Query: 325 VIALFLVILMRSHSLLRLR 343
            + L L+++ R   LL  R
Sbjct: 297 YLFLVLILIFRPKGLLGTR 315


>gi|221196888|ref|ZP_03569935.1| ABC transporter permease protein [Burkholderia multivorans CGD2M]
 gi|221203558|ref|ZP_03576577.1| ABC transporter permease protein [Burkholderia multivorans CGD2]
 gi|221212529|ref|ZP_03585506.1| ABC transporter permease protein [Burkholderia multivorans CGD1]
 gi|221167628|gb|EEE00098.1| ABC transporter permease protein [Burkholderia multivorans CGD1]
 gi|221177492|gb|EEE09920.1| ABC transporter permease protein [Burkholderia multivorans CGD2]
 gi|221183442|gb|EEE15842.1| ABC transporter permease protein [Burkholderia multivorans CGD2M]
          Length = 289

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 50/305 (16%), Positives = 112/305 (36%), Gaps = 29/305 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +YV+ A GLSI+ G LG+++      +A+GAY  + L +++    W  + +
Sbjct: 9   VANGLVLGFLYVLLAIGLSIICGLLGIVNFAHGALFALGAYFAIALSTQF---GWAAVVL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++  A G+++ +  ++       + +LI++     ++     +  G  G+  +     
Sbjct: 66  APLLVAAVGVLIEVVFIRRLYGKEPLLSLIVTFALSLLITALTRLVWGAGGLPFSPPDAL 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                ++   +  +VL     +  ++  ++  T      R    + +
Sbjct: 126 GGL----------LVYGPLLITKYRLFVLGATVAILVALWWFMNYTPYGRILRAGSRDPE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +      AFA+ +   G AG   A             +  +    IV +GG+
Sbjct: 176 MVGLLGINLPRVLTGAFALGALLAGAAGVLAAPLLTV--TPGMATAAVMPAFVIVTIGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +    A  ++  V  L                  F    +  M + + +V+L+R   
Sbjct: 234 GSFAGAVVAGLLVGIVTALAVQF--------------FPEGSSVAMYVLMAVVLLVRPRG 279

Query: 339 LLRLR 343
           L   R
Sbjct: 280 LFGER 284


>gi|75909909|ref|YP_324205.1| inner-membrane translocator [Anabaena variabilis ATCC 29413]
 gi|75703634|gb|ABA23310.1| neutral amino acid ABC transporter membrane protein [Anabaena
           variabilis ATCC 29413]
          Length = 377

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 62/173 (35%), Gaps = 3/173 (1%)

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I +  +  V L +       + +L R+      + IR++++   ++   + + KL +  +
Sbjct: 208 IPKAGLMLVSLLVLAFVFWRLEYLVRSPWGRVLKAIREDEEIPKAMGKNVFWYKLQSLML 267

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
             A  G+AGAFFA     I PD F+         +VILGG  +         I      +
Sbjct: 268 GGAIAGVAGAFFAWQLSAIYPDNFQPQLTFDSWIMVILGGSGNNIGTILGAVIYFAYDAI 327

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              +                      + + L ++++ R   +L  +      +
Sbjct: 328 TREVLPKIIPLDEA---RLGAFRIMCIGLILMVLMIWRPQGILGKKEELTLGK 377



 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 62/155 (40%), Gaps = 1/155 (0%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y+  + I    + +F+ GL++  G  GL++   +    +GAY+ V+L  +        I 
Sbjct: 4   YLIFLAISTATFALFSLGLNLQWGFTGLINFGHIAFMTLGAYTTVLLSLKGVPLFISAIF 63

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            + + +   G+++G  +L+ R DYLAI T+   E+ + ++                    
Sbjct: 64  GA-IFAALLGLVIGFATLRLREDYLAIVTIGTGELIRLVVNNQDLPVGNTWVSGAFGVQS 122

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           +          FFR     ++  +F   V     +
Sbjct: 123 YPIPLSTEPNLFFRLLMIGILTLLFAVTVFSLWRW 157


>gi|330469208|ref|YP_004406951.1| inner-membrane translocator [Verrucosispora maris AB-18-032]
 gi|328812179|gb|AEB46351.1| inner-membrane translocator [Verrucosispora maris AB-18-032]
          Length = 298

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 91/308 (29%), Gaps = 27/308 (8%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI----------LGSRYGLSIWL 94
              IY + A G ++V G L L++      +  GA++ +             +    SI L
Sbjct: 1   MGAIYALVALGYTLVYGVLRLINFAHSEVFIAGAFAAIWGWAALGLDRDSVASGFGSIIL 60

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
            + V A+I+            +     L       +     ++              +  
Sbjct: 61  YLLVGALIAAVASAGTATVVERVAYRPLRKRN---APPLAFLITAIGASIAIAEAFGIYT 117

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
           R   +G           F  +     +    V++    +  ++ L++ R+ I    R + 
Sbjct: 118 RRLPVGAPTIVKPDLVLFEVAGTEVTVVQVLVIVSALAMMVALDLFINRSRIGRGIRAVA 177

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
            +Q     +        L  F +     G+AG  +      ++     F   +   +  +
Sbjct: 178 QDQNTAALMGINKDRIILVVFIIGGVMAGVAGMLYDIRIGTLTY-SVGFLLGLKAFTAAV 236

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           LGG+ +L        +L  V      +    +  L+ F     +              + 
Sbjct: 237 LGGIGNLRGALVGGLLLGLVENYASALFGANWKDLVAFVVLVVLL-------------MF 283

Query: 335 RSHSLLRL 342
           R   LL  
Sbjct: 284 RPTGLLGE 291


>gi|146342473|ref|YP_001207521.1| putative sugar (D-ribose) ABC transporter permease [Bradyrhizobium
           sp. ORS278]
 gi|146195279|emb|CAL79304.1| Putative Sugar (D-ribose) ABC transporter (permease protein)
           [Bradyrhizobium sp. ORS278]
          Length = 341

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 97/303 (32%), Gaps = 19/303 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           ++K D  L +L +V   ++            + +   Q+ ++ +F+   + V+   G + 
Sbjct: 1   MHKKDLSLLVLILVVGAVVAFINPRFLLVGNLSNTANQVGMFGIFSIAEAFVIIVGG-IE 59

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L      A+    ++ L     +   L   +  +   A G I G    K +     +   
Sbjct: 60  LAVGSVIALLGVLFIDLIVNRDVDWILAFVLIILGGVAIGTIHGTLVTKMKIQPFVVTLC 119

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +             I  G A  Y  D     G      +  +       +    + + +
Sbjct: 120 GL------------LIYRGAARYYTEDATAGFGYGASFPVLEWLTAGRTNVLGFPLPHSV 167

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +  ++    L L R+     +  +  N++A            +SA+ +      +A  
Sbjct: 168 VALVIVAGIAWLVLHRSVYGRYFYAVGKNEEAARYSGIRSDRVTISAYVICGGLTALAAV 227

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGM 301
             A     ISP +      +  I+  +LGG        S+  +   T +L  +  L   +
Sbjct: 228 LLAMYTRSISPAVHGSFYELYAIAAAVLGGCSLRGGEGSIIGVVLGTILLQVLQNLVNLL 287

Query: 302 NFY 304
              
Sbjct: 288 GIP 290


>gi|68249102|ref|YP_248214.1| ribose ABC transporter permease protein [Haemophilus influenzae
           86-028NP]
 gi|329122383|ref|ZP_08250970.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Haemophilus aegyptius ATCC 11116]
 gi|68057301|gb|AAX87554.1| Ribose transport system permease protein [Haemophilus influenzae
           86-028NP]
 gi|327473665|gb|EGF19084.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Haemophilus aegyptius ATCC 11116]
          Length = 323

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 88/301 (29%), Gaps = 23/301 (7%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           + +      S   I ++  Q  +  + A G++ V+   G + L+     A+       + 
Sbjct: 31  VSMINPDFFSVDNILNILRQTSVNAIIAVGMTFVILIAG-IDLSVGSVLALTGAIAASMV 89

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           S       ++  V  + +   G+   + +                + F   L+    +  
Sbjct: 90  SIELPIFLVIPVVLLIGTLLGGISGVIVAK------------GKVQAFIATLVTMTLLRG 137

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                     +    +    L     F S    Y + +   +  M  + A     L+ T 
Sbjct: 138 ITMVYTDGRPITTGFSDNADL-----FASIGTGYVLGIPVPIWIMSIVFAVAWYILKHTP 192

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           I      +  N+ A       +   K+  FAVS     +AG    +      P      E
Sbjct: 193 IGRYIYALGGNEAATQLSGINVNKIKVFVFAVSGFLSALAGLIVTSRLSSAQPTAGVSYE 252

Query: 266 NIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              + ++V+     +GG   +        I+  +      ++   +  ++       +  
Sbjct: 253 LDAIAAVVVGGTSLMGGKGRVMGTLIGALIIGFLNNALNLLDISSYYQMIAKALVILVAV 312

Query: 321 T 321
            
Sbjct: 313 L 313


>gi|119715097|ref|YP_922062.1| inner-membrane translocator [Nocardioides sp. JS614]
 gi|119535758|gb|ABL80375.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Nocardioides sp. JS614]
          Length = 288

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 86/296 (29%), Gaps = 29/296 (9%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLSIWLLIPVSAMISGA 105
           L+  + A G ++  G  G ++L     + + AY +  +  S + +++        ++S  
Sbjct: 18  LLLFLLASGFTLTFGLAGFVNLTHGAVFMVAAYVATALSSSSFPVAVLAAGATGTVLSTL 77

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
              +  L   K   D L+   L    +                 +               
Sbjct: 78  VYAVSRLRWTKLASDELSQVLLTFGLLLVFAETARVLWEGLPRSLPEPGFAS-------- 129

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                 +  +   +  +   +      L+ S+     RT      R   D++    +   
Sbjct: 130 ----GSWDLAGSAFPTYRVLMGGVALVLAGSLWWLQERTRFGAMVRAGVDDRDMLEATGV 185

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                 L+ FA+S    G+AG   A           +F   ++   IV+LGG  +L    
Sbjct: 186 ASGPLFLAVFALSGLLAGLAGGIGAPVLGAA--MGQEFGVLVLAFVIVVLGGPGNLKGAF 243

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            A+  +         +                      M+  + +V+  R   L  
Sbjct: 244 IASLTVGIADAYGKAL--------------LPTFAEFTMMALVVVVLAWRPQGLFG 285


>gi|324327130|gb|ADY22390.1| ribose abc transporter, permease protein [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 334

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 98/311 (31%), Gaps = 22/311 (7%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +     +V   +  +          I  + +   +  + A G ++++ + G + L+C   
Sbjct: 28  LAFASLIVLVFIFSIASANFLQFDNIIGIFLSTAVTGILALGATMIIVTSG-IDLSCGTV 86

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             + +    +     GL +W+ +    +I    G+I G    K +         +M    
Sbjct: 87  LTLSSVMTGVFAVNLGLPVWVAVIGGILIGAVVGLISGAAIAKLKIPPFIATLAMMMIAK 146

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
              L+  K                       S+  F +     +I    +   +     +
Sbjct: 147 GLALVISKA----------------TPIYFTSIPSFNKIAMGSIIPGFAIPNAVFIFFGM 190

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +    L L +T I      +  N++A       +   K+  + ++  F G+AG   A+  
Sbjct: 191 AIFASLILNKTIIGRYTFALGSNEEATRLSGVNVDKWKIIIYMLAGVFTGVAGIIMASRL 250

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +   P +    E   + ++VI      GG  ++        I+  +      ++      
Sbjct: 251 NSAQPALGAGYELEAIAAVVIGGTSLSGGKGTILGTVIGALIMSVLTNGLQILSVPQEWQ 310

Query: 309 LLKFDCSFNMR 319
           ++       + 
Sbjct: 311 IVVVGAVILLA 321


>gi|220929065|ref|YP_002505974.1| inner-membrane translocator [Clostridium cellulolyticum H10]
 gi|219999393|gb|ACL75994.1| inner-membrane translocator [Clostridium cellulolyticum H10]
          Length = 320

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/322 (11%), Positives = 88/322 (27%), Gaps = 32/322 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L K+  ++ L  V+    L            + ++  Q  I  + A G++ VV   G + 
Sbjct: 16  LEKFATLIGLFLVILIFALL--KPKFLDVNNVFNLLRQASINGLLALGMTFVV-LTGGID 72

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA-- 125
           L+             ++   + +  ++ + V   +    G + G+     +         
Sbjct: 73  LSVGSILGASGIFAALVAQNHDIPWFVAVFVGLGVGFILGSLNGIVISWLKVPAFVATLG 132

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            L ++     +    +P+     G                                 +  
Sbjct: 133 MLSVARGITYLASNAQPVPGLSEGFLKI----------------------GGGNVGIIPI 170

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            ++ +  +     + + +         +  N KA       +   K SA+ ++    G+A
Sbjct: 171 PVIILAVVFIICSVLIYKAKYGRYIFGVGGNAKAARLSGINVKKIKWSAYMIAGVLAGLA 230

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G    +          +  E   + ++V+      GG   L        I+  +      
Sbjct: 231 GVVLTSRVSSGLAMAGQNYETDAIAAVVMGGTSLAGGKGRLWGTLVGVLIIAVLNNGLDM 290

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           M    +  L+            
Sbjct: 291 MAVSSYWQLIIKGLIIIAAVMM 312


>gi|333023600|ref|ZP_08451664.1| putative branched-chain amino acid ABC transporter, permease
           [Streptomyces sp. Tu6071]
 gi|332743452|gb|EGJ73893.1| putative branched-chain amino acid ABC transporter, permease
           [Streptomyces sp. Tu6071]
          Length = 295

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/283 (15%), Positives = 84/283 (29%), Gaps = 11/283 (3%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL---SIWLLIPVSAMIS 103
            +Y + A GLS++ G + +L+       +IGAY+     S +            ++ +  
Sbjct: 16  ALYFLVASGLSLIFGLMDVLNFAHGALLSIGAYATWWAASGHLQGAGPGGFGFVLAVVFG 75

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
              G +  +         L             I +    +  G  G              
Sbjct: 76  VCAGTVAAVLVELLVVRPLYTRPREQVLATVGISLAVPALLAGIWG-------SDAHRFP 128

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                   F        +    ++     + A + L+L RT      R   +++    +L
Sbjct: 129 GPEALGDTFGLLGARVPVNRLVLVAAAVVVWAGLKLFLDRTRYGLVVRAGVEDRAMVTAL 188

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              +  A    FA+  A   + GA        + P     S  I    +V+ GGM S+S 
Sbjct: 189 GIDVRKAFTLVFAIGGAAAALGGALGGLYFGSVDPRQ-GTSLLIFAFVVVVTGGMGSVSG 247

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            A A+ ++  V +            L        +       +
Sbjct: 248 AAVASVVIGLVQQFANYYTTAGLGDLAVVVLLAALLLLRPRGL 290


>gi|159186662|ref|NP_396468.2| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|159141722|gb|AAK90909.2| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 269

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 47/284 (16%), Positives = 91/284 (32%), Gaps = 16/284 (5%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           +G++++       IGAY  V+ G     S+ L IP++ +++   G+I+    ++     L
Sbjct: 1   MGVINMAHGEMVMIGAYVAVLSGIWLKTSLLLAIPLAFVVTALLGLIIERVVVRRLYGRL 60

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR-FPSSFVIYEI 181
               L    I   +    +            + L      V         F  +      
Sbjct: 61  LDTLLATWGIAILLQQAVRLELGLTFLGIHIEGLGAGLQNVAVPSYLQGTFRFAGADINA 120

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
           +  +++     L+ +    L RT      R I  N K   +    +       FA  S  
Sbjct: 121 YRTFIIAVTAALTLATWFILYRTTAGMQVRAIIRNPKMAAACGIDVKRINALTFAFGSGL 180

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AG   +  +            +     +V+ GG+ SL   A ++ +L  +  L    
Sbjct: 181 AGVAGVMMSGFKTVFPDMGTTMVVDG--FMVVVTGGVGSLFGTALSSGLLGEINALVAIG 238

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                   + F               + LVIL++   L   +  
Sbjct: 239 TNDILARAVVFG-------------VVILVILVKPSGLFSFKGR 269


>gi|154244996|ref|YP_001415954.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154159081|gb|ABS66297.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 289

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/290 (11%), Positives = 77/290 (26%), Gaps = 15/290 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ S  +   IY +   G + +    G+++        +GA + + L S        ++
Sbjct: 6   QFLLSGIVVGSIYGLIGVGFTCIFNVTGIVNFAQGDFAMVGAMTTIALLSAGVPLPIAIV 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +      +I        R D +    + +        +           +      
Sbjct: 66  LAIVVTCLVAAIIERTAIRPVRSDVVRGIIVTIGIGVILHGVAALVWGTDAQPM------ 119

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   +                   +V+         + L  R+T +   +R    N
Sbjct: 120 -------PAFSGDAPIRIGGATISPQALWVVGAAMTAMVLLELLFRKTFLGQMFRACAIN 172

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             A   +   +    L +F +S A   +AG   A     ++         I      I+G
Sbjct: 173 PFAAGLVGIRVGTMSLISFVMSGALGAIAGIVVAP--IALTQYDSGLQLGIKGFVACIVG 230

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           G       A    +L  +     G     + + + F             +
Sbjct: 231 GFGGPIGAALGGILLGILEAFAAGYVSSGYKNAIAFVLLLVFLLFRPGGL 280


>gi|308186514|ref|YP_003930645.1| ABC transport system permease protein [Pantoea vagans C9-1]
 gi|308057024|gb|ADO09196.1| putative ABC transport system permease protein [Pantoea vagans
           C9-1]
          Length = 368

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 89/299 (29%), Gaps = 9/299 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      + +    +   +  M   I I    A G++ V+ + G + L+      
Sbjct: 33  FIALILIVGFFAITVPDFLATGSLVIMVKHIAINAFLALGITFVIITAG-IDLSIGATLG 91

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L ++  +     I  +   S    + + L      G          +     
Sbjct: 92  LCGMIAGWLITKGIVLPMFGI--AIFPSVWVIVPVVLLVGALIGAGNGWIITRYNVAPFI 149

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             +    I  G A +  +    F G     L+    F        + + Y +  M  L+ 
Sbjct: 150 CTLGTMYILRGAA-MLTSGGETFPGLQGNPLLGNTGFDRIGAGTFLGLPYAIWMMVLLAL 208

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I    RR         I DN++A           K+  + +S     +AG   ++    
Sbjct: 209 VIAYIARRLPFGRQVYAIGDNERAAELSGVKTRQVKILVYTLSGFCAAIAGIVVSSQLVA 268

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             P      E   + ++V+      GG  ++        ++  + +    M    F  +
Sbjct: 269 SHPANGTAFEMNAIAAVVLGGTSLAGGRGTIVGTLIGAFVIGFLADGLIMMGVSEFWQM 327


>gi|116253647|ref|YP_769485.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115258295|emb|CAK09397.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 303

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 89/303 (29%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y    +    GL     +  +
Sbjct: 25  VDALAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMIGGYIASYVARDLGLGYAAAVIAA 84

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +I+    + +     +       +  ++M+      +I       G            L
Sbjct: 85  VVITIIVAIPIERFLYRRIYGAPELTQVLMTIGITFCVIGIANYVMGP----------TL 134

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T   +          F    +   +V+L    ++ ++   + RT+     R   D+   
Sbjct: 135 KTIPLAGALQGSADLGFRTIPVHRLFVILCGLAVALALWFAIDRTSFGVKLRASVDDAAM 194

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FAV+       G   A          +     +  + +V +GG  
Sbjct: 195 AAALGVRTEIIYAVSFAVAVGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGAG 252

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L  +      +   +                    +A+  +I +    L
Sbjct: 253 SIPGALIACLLLGAIDTTGRYLMPEFGE--------------FFFYLAVIAIICVFPRGL 298

Query: 340 LRL 342
              
Sbjct: 299 AGR 301


>gi|163746734|ref|ZP_02154091.1| inner-membrane translocator [Oceanibulbus indolifex HEL-45]
 gi|161379848|gb|EDQ04260.1| inner-membrane translocator [Oceanibulbus indolifex HEL-45]
          Length = 305

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 113/307 (36%), Gaps = 15/307 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + A GL+++ G +GL++L     Y +GA++   + +  G  +  L+  
Sbjct: 10  VLNGVQSGVMLFLMAAGLTLIFGVMGLINLAHGSLYMVGAFAAAAVAAATGSFLLALVAA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A  + A  +I      +              +    +L  +  I     G       + 
Sbjct: 70  LAAAALAGCLIEMTVIRRLYDR----------DHLDQVLATFALILIFSEGTRFLFGSFP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   + S +         + Y ++   ++     ++A + L + RT I    R    +++
Sbjct: 120 LFLEIPSALSGPVMLPGGIQYPLYRLVIIGVGLVIAAGLFLLIARTRIGIQIRAGEADRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+
Sbjct: 180 MIAALGVDIAKLYTLIFALGAALAGLAGALVGAIQSV--QVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL---MVIALFLVILMR 335
            S+        ++     L   +   +F + ++   + ++  +     + I +  V+L +
Sbjct: 238 GSIKGALIGALLVGLTDTLGSVLLPLFFANFMEASAATSVGSSLASMSIYILMAGVLLFK 297

Query: 336 SHSLLRL 342
              L   
Sbjct: 298 PTGLFGE 304


>gi|157694018|ref|YP_001488480.1| ribose ABC transporter ATP-binding protein [Bacillus pumilus
           SAFR-032]
 gi|157682776|gb|ABV63920.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Bacillus pumilus SAFR-032]
          Length = 317

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 101/312 (32%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  ++   ++ +   A      I ++  QI I  + A+G++ V+   G + L+     A
Sbjct: 20  FLGLIILVAIVSILNPAFLEPLNILNLLRQISINALIAFGMTFVI-LTGGIDLSVGAILA 78

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +               L I V ++I    GM+ GL   K +      ATL    IF+ 
Sbjct: 79  LSSALTAGFIVSGMD-PILAIIVGSIIGAILGMVNGLLITKGKMAPFI-ATLATMTIFRG 136

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L   + F      Y + +    + M     
Sbjct: 137 LTL-----------------VYTDGNPITGLGSNYAFQLFGRGYFLGIPVPAITMLLTFI 179

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + + L +T        I  N+KA       +   K+  ++++     +AGA   +  + 
Sbjct: 180 VLWVLLHKTPFGRRTYAIGGNEKAALISGIKVPRVKIMIYSLAGFMSALAGAILTSRLNS 239

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 240 AQPTAGTSYELDAIAAVVLGGTSLSGGRGRIVGTLIGVLIIGVLNNGMNLLGVSSFYQSV 299

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 300 VKGIVILIAVLL 311


>gi|315647815|ref|ZP_07900916.1| inner-membrane translocator [Paenibacillus vortex V453]
 gi|315276461|gb|EFU39804.1| inner-membrane translocator [Paenibacillus vortex V453]
          Length = 322

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 97/311 (31%), Gaps = 18/311 (5%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +     VV  +   +          I  + +   +  + A G + V+   G + L+    
Sbjct: 14  LALASLVVLIVFFTISSSNFFQFSNIVGILLSTAVIGVLALGSTFVI-ITGGIDLSVGTV 72

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             +      +  + +GL + + I    +    CG++ G    K +               
Sbjct: 73  MTLSGVMTGVCITFWGLPVPVGILGGILTGALCGLLSGTAVAKMKIPPFIAT-------- 124

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
               +    I  G A I    +  +                 ++I  + +   ++     
Sbjct: 125 ----LAMMMIAKGLALIISGAKPVYFNDAESFAEVSQGSVLGWLIPGLDIPNAVVIFFVA 180

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +    L L +T I      +  N++A       + F K+  + ++ AF G+AG   A+  
Sbjct: 181 AIVGYLILSKTIIGRYNFALGSNEEATRLSGVNVGFWKIVIYTLTGAFTGLAGVMMASRL 240

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +  +P +    E   + ++VI      GG  ++        I+  +      ++      
Sbjct: 241 NSANPALGAGYELEAIAAVVIGGTSLSGGKGTIIGTVIGALIMSVLTNGLRILSVPQEWQ 300

Query: 309 LLKFDCSFNMR 319
            +       + 
Sbjct: 301 TVVVGFVIILA 311


>gi|242241370|ref|YP_002989551.1| ribose ABC transporter permease [Dickeya dadantii Ech703]
 gi|242133427|gb|ACS87729.1| inner-membrane translocator [Dickeya dadantii Ech703]
          Length = 322

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 88/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAVVSSMSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSVLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +        + +                     
Sbjct: 82  LTGAVAASIVGLEINALVAVFAALALGAVIGAGTGIIVAKGRVQ--------AFIATLVM 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L+          G         + T   S      +      + +     ++ + FL+ 
Sbjct: 134 MLLLRGVTMVYTNG-------SPVNTGFSSAADTLGWFGIGRPFGVPAPIWIMAVVFLAT 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGISVDKVKVVVYSLCGLLSALAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLSGGKGRVVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|220921541|ref|YP_002496842.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219946147|gb|ACL56539.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 287

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 88/304 (28%), Gaps = 28/304 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +Q L+  + A  +++V G     +        +GAY+  ++  R   S+      
Sbjct: 7   LLNGLVQGLVIGLSALAITLVFGIARFPNAATGDTMTLGAYA-ALMVHRATGSLAAAGVT 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +   A  ++      +   D   +A L+ S     ++     +  G         L  
Sbjct: 66  ALVAGAAASLLAYALVFRRLADRSVVALLVASIGVGFVIRAGLGVAFGHGQQVFRVPLAR 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I         V          L               T I  A R + DN+ 
Sbjct: 126 PYLVGGLRIAPIDLQLGAVALAALAVTFGLLYL------------TPIGRAMRAVADNRD 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                        ++ + ++ A  G AG         +      +   +   +  I GG+
Sbjct: 174 LARVSGIRPGRVMVALWLLAGAVAGTAGMMLG--IKTVVAPESGWEILLPAFTAAIFGGI 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +    A  +L    E+   +  + +   + F               +  V+L+R   
Sbjct: 232 GSPAGAVLAGLLLGMAQEVSTPIVGFTYKIAVAF-------------AIMLAVLLVRPRG 278

Query: 339 LLRL 342
           L   
Sbjct: 279 LFGR 282


>gi|145628884|ref|ZP_01784684.1| ribose ABC transporter permease protein [Haemophilus influenzae
           22.1-21]
 gi|145638581|ref|ZP_01794190.1| ribose ABC transporter permease protein [Haemophilus influenzae
           PittII]
 gi|144979354|gb|EDJ89040.1| ribose ABC transporter permease protein [Haemophilus influenzae
           22.1-21]
 gi|145272176|gb|EDK12084.1| ribose ABC transporter permease protein [Haemophilus influenzae
           PittII]
          Length = 322

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 88/301 (29%), Gaps = 23/301 (7%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           + +      S   I ++  Q  +  + A G++ V+   G + L+     A+       + 
Sbjct: 30  VSMINPDFFSVDNILNILRQTSVNAIIAVGMTFVILIAG-IDLSVGSVLALTGAIAASMV 88

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           S       ++  V  + +   G+   + +                + F   L+    +  
Sbjct: 89  SIELPIFLVIPVVLLIGTLLGGISGVIVAK------------GKVQAFIATLVTMTLLRG 136

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                     +    +    L     F S    Y + +   +  M  + A     L+ T 
Sbjct: 137 ITMVYTDGRPITTGFSDNADL-----FASIGTGYVLGIPVPIWIMSIVFAVAWYILKDTP 191

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           I      +  N+ A       +   K+  FAVS     +AG    +      P      E
Sbjct: 192 IGRYIYALGGNEAATQLSGINVNKIKVFVFAVSGFLSALAGLIVTSRLSSAQPTAGVSYE 251

Query: 266 NIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              + ++V+     +GG   +        I+  +      ++   +  ++       +  
Sbjct: 252 LDAIAAVVVGGTSLMGGKGRVMGTLIGALIIGFLNNALNLLDISSYYQMIAKALVILVAV 311

Query: 321 T 321
            
Sbjct: 312 L 312


>gi|160901455|ref|YP_001567037.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160367039|gb|ABX38652.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 286

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 57/297 (19%), Positives = 110/297 (37%), Gaps = 27/297 (9%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           ++Y + A GLSIV G L  ++      Y +GAY      +R+G+S WL + V  +  GA 
Sbjct: 16  MLYFLLAVGLSIVFGLLRFVNFAHGAFYLLGAYFCY-QMTRWGMSFWLSLVVVPLAVGAL 74

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G ++    L+          +I++     ++ +   +  G  G  VA      G      
Sbjct: 75  GWLVEKLMLRHVYAKAHEFHIIVTVGLALVVQELVIVQWGPLGDSVAVPDLLQGV----- 129

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                      +Y  +  +V+     L+  +   L  T + +A R   ++ +    L   
Sbjct: 130 -----VMWGSFVYPKYRLFVIGFTAVLAVLLWWLLEGTRLGSAVRAGSESTEMVSLLGVN 184

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           ++      FA+ +A   +AG   A  R              +   IV++GG+ S      
Sbjct: 185 VLRIFSLVFALGAATAALAGVLAAPIRGA--EPFMGVEALGVAFVIVVVGGLGSFGGALV 242

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
              ++  V  +   +              +      ++ +A+  V+L+R H LL  +
Sbjct: 243 GGLLIGIVQSVMSTL--------------WPEGARLMIYVAMAAVLLLRPHGLLGRK 285


>gi|110632839|ref|YP_673047.1| inner-membrane translocator [Mesorhizobium sp. BNC1]
 gi|110283823|gb|ABG61882.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Chelativorans sp. BNC1]
          Length = 290

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 91/305 (29%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GL ++  + G+++        +GA+S        GL   L   +
Sbjct: 7   LTAGLAHGGLYALVALGLVLIYKTQGIVNWAHGELLMVGAFSGYTAFVLVGLPYPLAFLI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G +M   + +           +++  F  I+     I  G     +   +  
Sbjct: 67  AVLAGALLGAVMERVAFRGIVHEHHATLALVAIGFSVIIKGLARIPFGADVYTLPPAVDA 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                           +  I        +     ++  ++   R T      +  + N  
Sbjct: 127 GPLRF-----------AGAIVTAQSVLTITISVGIALMLLAIFRYTRTGRQMQATQQNLN 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           +A+++A   +AG         +          +   +  +LGG 
Sbjct: 176 GARIVGVNTGRIFSITWALAAAVGAVAGLLAGP--TSLLYPDMGSEFLLKGFAAAVLGGF 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++       ++  +  L  G     F  +  F             + + +V+ +R H 
Sbjct: 234 YSVTGAIVGGLLVGVIEMLIGGYISTAFQQVSPF-------------LIIIIVLFVRPHG 280

Query: 339 LLRLR 343
           L   R
Sbjct: 281 LFGRR 285


>gi|239816457|ref|YP_002945367.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239803034|gb|ACS20101.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 291

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 101/298 (33%), Gaps = 26/298 (8%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           +    Y + + GL+++ G L +++      + +GA    +  + + ++ W+++ V+ +I 
Sbjct: 17  VNGSFYAILSLGLAVIFGLLNVINFAHGALFMMGAVLSWMAMNYFNVNYWVMLVVAPVIV 76

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
           G  G+++    L++      +  L+++     ++        G +G+  +          
Sbjct: 77  GLFGVLIERLLLRWIYKLDHLYGLLLTLGLTLLIEGGFRSVYGVSGLAYSTP-------- 128

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                       F+    +  +V++    +  +    + +T +    R   +N +   + 
Sbjct: 129 --EALSGGTNLGFMFLPNYRAWVVVASLVVCFATWYAIEKTRLGAYLRAGTENPRLVEAF 186

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              +       +    A    AG   A         +   +  IIV ++V++GGM S+  
Sbjct: 187 GVNVPLMVTLTYGFGVALAAFAGVLAAPVIQI--SPLMGQNLIIIVFAVVVIGGMGSIMG 244

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  L  V  L          +++                     +L+R   L  
Sbjct: 245 AILTGLGLGVVEGLTKVFYPEASATVVFVIMVVV--------------LLIRPAGLFG 288


>gi|113867429|ref|YP_725918.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113526205|emb|CAJ92550.1| ABC-type transporter, permease component: HAAT family [Ralstonia
           eutropha H16]
          Length = 288

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 112/301 (37%), Gaps = 26/301 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL+++ G +G+++L     Y +GAY      +    ++++ IP+ 
Sbjct: 11  LNSVQYGLLLFLVASGLTLIFGIMGVINLAHGSFYMLGAYL-AFTLAGLTGNLFIAIPLG 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++ A G ++      +  +   +  ++M+     +  + + I  G             
Sbjct: 70  IVLAVAFGYVLEWAFFSYLYERDHLQQVLMTYGLILVFEELRSILVGDDVH--------- 120

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G  V +L+       + + Y ++  ++      ++ ++   +RRT +    R    N++ 
Sbjct: 121 GVQVPALLDGALAIGNDMTYPVYRLFISAVCLVVALAMYYVIRRTRLGMMIRAGATNREM 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             SL   I       FA+  A   +AG   A                I+   +V++GG+ 
Sbjct: 181 VQSLGINITVLYRFVFALGVALAVLAGMIAAPVSSV--YPGMGAQVLIVCFVVVVIGGIG 238

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A+ +L  V                     +      L+ + + +++L +   L
Sbjct: 239 SVKGALVASLLLGFVDTFGKVF--------------WQEAAGVLIYLLMAVILLWKPQGL 284

Query: 340 L 340
            
Sbjct: 285 F 285


>gi|291166333|gb|EFE28379.1| ribose ABC transporter, permease protein [Filifactor alocis ATCC
           35896]
          Length = 317

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 96/312 (30%), Gaps = 17/312 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  +++ +++ +      +   + ++  Q  I  + A G++ V+   G + L+     A
Sbjct: 13  VLGLILFSVVITIIRPNFMTSANLLNVLRQTSINAIIAAGMTFVI-LTGGIDLSVGSILA 71

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             + +  +   + G  I + + V  +I    G+   +   +        ATL    + + 
Sbjct: 72  FSS-AVGVWMLQTGNGIAVSVLVCLVIGALAGLFNSVVITRGNIQPFI-ATLATMTLLRG 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             + +                        +L     F        + +   ++ M  +  
Sbjct: 130 ATLVFTGGK---------PLAISFSKDAINLSSLCIFQKIGSGKVLGIPIPIIIMIVVFL 180

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                LR  AI      I  N++A       +   K  A+  +     +AG   A+    
Sbjct: 181 LCWHILRNMAIGRYIYAIGGNEEAAKLSGLNVKKIKAMAYVFNGVLAALAGLILASRLVS 240

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG  S+        I+  +      M+   +  ++
Sbjct: 241 AQPTAGNGYELDAIAAVVLGGTSLAGGQGSVLGTILGALIIGVLNNALNLMDVSSYYQMI 300

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 301 CKAIVILIAVLL 312


>gi|163782933|ref|ZP_02177928.1| Putative high-affinity branched-chain amino acid transporter
           membrane protein [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881613|gb|EDP75122.1| Putative high-affinity branched-chain amino acid transporter
           membrane protein [Hydrogenivirga sp. 128-5-R1-1]
          Length = 291

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 88/301 (29%), Gaps = 26/301 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +    Y   + G S+  G L +++L       +G+Y    L +  GL   L +P+S   
Sbjct: 12  LLLGAFYAFMSLGFSLSWGVLNIINLAYGSFIVLGSYLSYSLYTILGLDPVLSLPLSFGC 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G ++    L+    Y     LI++     +L     +        +          
Sbjct: 72  GFLLGTLLQRLLLQRLMGYEPFMVLILTFGLDILLSHLLNLIFKADIRSLDVPYAEG--- 128

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                    F    VI      +V      L+A + L+L +T    A R +  +++    
Sbjct: 129 --------SFLLGNVIVPYVKLFVFFLAVLLTAGLFLFLTKTWTGRAIRAVALDREGAQL 180

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +        L    + +     +G  +   +     D       I    + I+GG+  + 
Sbjct: 181 VGIDPSRIFLVVSGLGTGIALSSGNMYGLLQGFTPFD--GGFLTIKAFLVSIIGGLGRVE 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   L  +           +                   + +  V+L+R   L   
Sbjct: 239 SAFVGGMFLGFMEIFVSFYWGEGWKLFASL-------------VVMTAVLLLRPRGLFGG 285

Query: 343 R 343
           +
Sbjct: 286 K 286


>gi|144899101|emb|CAM75965.1| inner-membrane translocator [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 290

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/307 (10%), Positives = 78/307 (25%), Gaps = 27/307 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ +      IY +   G +I+  +  +++        IG  +   L +        ++
Sbjct: 6   QYLFAGLTSGAIYALAGLGFAIIYNASHVINFAQGEFIMIGGMATATLNAAGVPLPAAIL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A+       +        R   +    +I       +    + +             
Sbjct: 66  AAMALTMLVGVALEKFAIEPARNADVVTIIIITIGASIFLRGAAQVVW------------ 113

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +                     +V        A++  +   T    A      N
Sbjct: 114 DKEFHALAPFSGETPIRILGATLMPQSLWVFGVSMAAIAALWWFFNHTLFGKAMLATSFN 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +    L +FA+S+    + G          +         +   S  +LG
Sbjct: 174 RLAAQLMGIGVKKVLLVSFALSALLGAVGGIVVTPIAF--TNYEAGIMLGLKGFSAAVLG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +         I+     L  G     +   + F             + +  V+    
Sbjct: 232 GLGNGMGAVVGGLIVGIAEALGAGYVSSAYKDAIAF-------------VIILFVLFFMP 278

Query: 337 HSLLRLR 343
           + L   +
Sbjct: 279 NGLFGKK 285


>gi|118588901|ref|ZP_01546308.1| possible ABC transporter subunit [Stappia aggregata IAM 12614]
 gi|118438230|gb|EAV44864.1| possible ABC transporter subunit [Stappia aggregata IAM 12614]
          Length = 342

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 46/341 (13%), Positives = 104/341 (30%), Gaps = 47/341 (13%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA-------------------- 78
           + +   +   Y + A GL+++ G+LG+++      + +GA                    
Sbjct: 8   LLNGLDKGGAYALIALGLTLIFGTLGVVNFAHGALFMLGAFCAVTFNKLLSLEIVTTDPT 67

Query: 79  --------------YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYL 122
                         Y    LG      +   +PVS +++    ++ G    +   +  Y 
Sbjct: 68  KTTAWGTPLEIRTPYIEAYLGDFGNWVLNYSVPVSILLAIPVMLLFGFIMERGLIKHFYN 127

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
                 +   F   ++  + I +      +             +          ++Y  +
Sbjct: 128 RAHADQILVTFGLAIVLQEIIKSIFGANPIPQTAPDAVRGAADIGAALGMDPGVIVYPYW 187

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
               L     + A++  +L+ T      R    ++     L   I       FA+++   
Sbjct: 188 RMVYLAFAGAIIAAVFAFLQFTTFGMVVRAGMADRHTVGLLGINIERRFTIVFAIAAVVA 247

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+AG  +             F     V+ +V    M SL     A  +L  +        
Sbjct: 248 GLAGVMYTPILPPDYHMGMDFLVLSFVVVVVGG--MGSLPGAVAAGFLLGILQS------ 299

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
              F S+ +           ++ +   +++L+R   LL  +
Sbjct: 300 ---FASMNEIKAILPGIDQIIIYLVAVVILLVRPRGLLGRK 337


>gi|86739568|ref|YP_479968.1| inner-membrane translocator [Frankia sp. CcI3]
 gi|86566430|gb|ABD10239.1| amino acid/amide ABC transporter membrane protein 1, HAAT family /
           amino acid/amide ABC transporter membrane protein 2,
           HAAT family [Frankia sp. CcI3]
          Length = 772

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 52/333 (15%), Positives = 99/333 (29%), Gaps = 38/333 (11%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            + D +  L      L    F  +     ++           +    + IV G  G LSL
Sbjct: 323 ARRDFLGKLGGAALLLAPLTFAPSDLRSAFMVPAL------ALIFLSVVIVTGYSGQLSL 376

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                  +GA    +L  +        +P    ++      + +  +     Y AI    
Sbjct: 377 GSAGYAGLGA----LLSLKLANGDLFGLPKLPGVASMFIGALLVAPIGLITGYPAIRRRG 432

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           ++       +          G  V+  ++   T    L         + + +   Y + L
Sbjct: 433 LTLALTTFAV----------GAVVSRFVFEQPTFATGLYLDPLTFFGWELPDEAFYVLEL 482

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
               L    +  L R  +  A   +RD+ +   ++   +   KL AF VSS   G+ GA 
Sbjct: 483 VCLGLGLFFVGNLHRGRLGRALLAVRDHAEGAAAVGVDVRNLKLLAFTVSSVVAGLGGAL 542

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              S    S D F   ++++  + V++ G  S                            
Sbjct: 543 LVHSSYSFSADDFAPLQSLLWFTAVVVFGADS------------------AAGAIVAAAF 584

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           ++  D       + L +  L L +      L  
Sbjct: 585 IVTIDVLAPAGSSILAIGILALALGWMPGGLAS 617



 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/280 (12%), Positives = 77/280 (27%), Gaps = 8/280 (2%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      I  +   GL +   + G+L+L       + AY +  +   +GL IWL    +
Sbjct: 8   LAGISLGAIAALSGIGLLVTYRTNGVLNLAQGGIATLVAYVFREMVVVWGLPIWLA---A 64

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +        +GL   +     LA      +E     L          AGI+        
Sbjct: 65  IIALAVVSPGIGLLLERLVFRPLARRRASAAESLVASLGVLVLTLGMTAGIWGLGSRSDA 124

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            +   +               +     L  +    A I +   RT      R + D+++ 
Sbjct: 125 PSIFPNSSVK---LFGDTRIGVDALAELAMVVVFCAVIGVIATRTVFGRQIRAVVDDRQL 181

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                        + +A  +   G+ G   A         +      +   ++V+   ++
Sbjct: 182 AELSGVPADQVAAAGWAAGTTLAGLTGILLAPRFQLTPYGLT--LLVLETFAVVVAARLS 239

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           S+         +  +               +      N+ 
Sbjct: 240 SMPVAVLTALGIAVLQSELKQFTLDGNAGQILTVLQSNLF 279


>gi|209885514|ref|YP_002289371.1| inner-membrane translocator [Oligotropha carboxidovorans OM5]
 gi|209873710|gb|ACI93506.1| inner-membrane translocator [Oligotropha carboxidovorans OM5]
          Length = 289

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 95/265 (35%), Gaps = 12/265 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+++ G L +++      Y +GA++   L    GL+ W  + +
Sbjct: 10  LLVGLINGSFYALLSLGLAVIFGMLNIINFAHGALYMMGAFAAYFLLQYGGLNYWWALLL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I GA GM++    L++      +  L+++     ++        G +G+  A     
Sbjct: 70  APLIVGAFGMLLERTLLRWLQGLDPLYGLLLTFGLALVIQGIFQNYFGSSGMPYAMPAEL 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G               F+   I+  +V++    +  +    + RT +    R   +N  
Sbjct: 130 RG----------GINLGFMYLPIYRGWVVIVSMVICLATWFLIERTRLGAYLRAATENPT 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       + +      +AG   A         +      I+V ++V++GGM
Sbjct: 180 LVRAFGINVPMMITLTYGLGVGLAALAGVLSAPINQV--GPLMGADLIIVVFAVVVIGGM 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNF 303
            S+         L  +  L      
Sbjct: 238 GSIMGSIITGFSLGVIEGLTKYFYP 262


>gi|160894335|ref|ZP_02075112.1| hypothetical protein CLOL250_01888 [Clostridium sp. L2-50]
 gi|156864036|gb|EDO57467.1| hypothetical protein CLOL250_01888 [Clostridium sp. L2-50]
          Length = 339

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 95/313 (30%), Gaps = 25/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ ++  + + L      +   I S+  QI I    A G+++++  LG + L+     
Sbjct: 29  IIVVLIIMCVAVALATDKFLTTNNIISVLRQISINTYIALGMTLII-ILGHIDLSVGSIV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+     V      GL + + I    ++  A G + G     F+     I          
Sbjct: 88  AMSGTLTVGFIVNQGLPLGVAIAAGLLVGTAAGFVSGFIVANFKVPAFIITM-------- 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                   + N  +GI               L         F +  + + Y+++ +   S
Sbjct: 140 -------AMMNIASGIAYVYTGGQSTRITNKLFIEIGTGYLFNVIPLPVVYMVVLIILFS 192

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +     +T        I  N++A       I   ++  F +S      AG    +   
Sbjct: 193 FIL----SKTKFGTYVYAIGGNREAARLSGVPIKKIEIIVFTISGLLSAFAGLVLCSRMY 248

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P +    E   + + V     + GG   +S       ++  +      +    +  L
Sbjct: 249 SGQPSVGSGYELDAIAACVLGGTSMTGGKGRISGTVFGAMVIGIISNGLNLIGVSSYWQL 308

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 309 IIKGLIIACAVLL 321


>gi|312170579|emb|CBX78843.1| Ribose transport system permease protein rbsC [Erwinia amylovora
           ATCC BAA-2158]
          Length = 322

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 85/302 (28%), Gaps = 23/302 (7%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           +        +   + ++  Q  +  + A G+++V+ + G + L+     A+       L 
Sbjct: 33  VSSLSPNFFTVSNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLALTGAVAASLV 91

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
                ++  +     + +G   +   +                     Q  +     +  
Sbjct: 92  GLEVNALVAVAASLVLGAGIGAITGVIV---------------AKGNVQAFIATLVMMLL 136

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
            +    V      + T   +    F +        I     L+ + FL+A  +L   R  
Sbjct: 137 LRGVTLVYTNGSPVNTGFSANADLFGWFGIGRPLGIPTPVFLMAVVFLAAWYMLHHTR-- 194

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +      +  N+ A       +   K+  +++      +AG    A      P      E
Sbjct: 195 LGRYIYALGGNEAATRLSGIRVNRVKIIVYSLCGMLAALAGTIEVARLSSAQPTAGTGYE 254

Query: 266 NIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              + ++V     + GG   ++       IL  +      +    +   +       +  
Sbjct: 255 LDAIAAVVLGGTSLAGGKGRITGTLIGALILGFLNNGLNLLGVPSYYQTIVKAVVILLAV 314

Query: 321 TT 322
             
Sbjct: 315 LV 316


>gi|288920416|ref|ZP_06414726.1| inner-membrane translocator [Frankia sp. EUN1f]
 gi|288348223|gb|EFC82490.1| inner-membrane translocator [Frankia sp. EUN1f]
          Length = 655

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 99/278 (35%), Gaps = 8/278 (2%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+   +   L            +      I+ M    + ++VG  G LSL  +      A
Sbjct: 311 ALGVAVAGALGCIWWLLPVPWVNALNANAIWAMIILSVVVLVGFTGQLSLAQLAFSGTAA 370

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
                L +  G  +   + V    +   G++  LP+L+ RG  LA+ TL +      +L 
Sbjct: 371 LIAGRLVAVQGWPLEAALVVGVAGTALVGVLFALPALRTRGLQLAVVTLGLGAAVDALLF 430

Query: 139 KWKPITNGKAGIYV--ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           +    +             L  L  T    +         V        + L    + A 
Sbjct: 431 QRGYHSPAPPSPLGDLFGDLSRLEGTEVGDVTLLGVHLDKVTDPRGFATLSLLAFTVLAL 490

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR- 255
           ++  LRR         +R N++A  +L  +++ AK+ AFA+S+A  G  G  +A      
Sbjct: 491 LVANLRRGRAGRRLIAVRTNERAAAALGISVVGAKIYAFALSAAIAGFGGVLYAFYAYGE 550

Query: 256 -----ISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
                    +F    +I++I+  ++GG+   S      
Sbjct: 551 RGNIDYGGGLFSPFASILLIAYAVVGGVGWTSGAFAGA 588



 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 92/290 (31%), Gaps = 12/290 (4%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y+        +Y + A G+ +V    G+L++      A  AY++    S +GL   L   
Sbjct: 7   YVLLSLGTGALYALVATGVVVVQRGAGVLNMAQGALLAWSAYAFHGASSVWGLPRALAAL 66

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           ++   + A G+      L+      A+  L+ +     ++     +  G         L 
Sbjct: 67  LAVGSTMAIGVAFQQLVLRPMRQATAVLRLMATLGLLIVIQSSLTLMYGSDVRNSPTVLP 126

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
               T+                 + ++  L  +  + A +    R T +  A   + +N 
Sbjct: 127 TSKVTLFD-----------TAVGVDVFTRLAVVVVVVAGLWAVFRFTTLGLAATAVTENA 175

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +A  +L  +       A+   SA  G+ G   A  ++ +S         +  +++ ++  
Sbjct: 176 RAAATLGWSPDAVASWAWLAGSALAGLGGVLLAPLQNPLSAGGL-MLLIVPGLAVALVAR 234

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             SL  +      L  V                  D +  +      +  
Sbjct: 235 FRSLPAVLVGAVALAAVELELQVHLVADHPVWRGVDRAVPLAVIVFYLAV 284


>gi|111017840|ref|YP_700812.1| sugar ABC transporter permease [Rhodococcus jostii RHA1]
 gi|110817370|gb|ABG92654.1| probable ABC ribose transporter, permease component [Rhodococcus
           jostii RHA1]
          Length = 339

 Score = 60.3 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 90/313 (28%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L  +V   +         S   +  +  QI +  +   GL+ V+   G + L+   A 
Sbjct: 36  VALALIVLIAVFSTVAPYFLSVDNLFDVARQISVTAILGAGLTFVI-MTGGIDLSVGSAV 94

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A+  V L      +   L+   A       +   L +    G    I TL      +
Sbjct: 95  GVTAFVAVALSINGAPAPVALLGALAAGLIIGLINGALVAGL--GLASFIVTLAALTYLR 152

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +                    Y              +        + +   +L M  + 
Sbjct: 153 GV-------------------TYVGTDGKTLFSTDLGYAVLGHGSLLGVPIPVLVMAAVF 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     L RT      R +  N +A       +     + + +S     + G   +A   
Sbjct: 194 AGGWYLLNRTVFGRWVRAVGGNAEAARLAGIPVRRVLTTVYVISGICAAVGGIIASARLQ 253

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              PD+    E   + ++V     ++GG  SL       AI+  +V     ++   F   
Sbjct: 254 SAVPDLGAGYELSAIAAVVLGGTSLMGGRGSLIGTLVGAAIIGVLVNGMTLLDVSTFYQQ 313

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 314 IIQGAVIVLAVAL 326


>gi|327310079|ref|YP_004336976.1| inner-membrane translocator [Thermoproteus uzoniensis 768-20]
 gi|326946558|gb|AEA11664.1| inner-membrane translocator [Thermoproteus uzoniensis 768-20]
          Length = 321

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 108/305 (35%), Gaps = 17/305 (5%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY----SYVIL 84
            L     +  +      I  Y+     ++I VG  G ++       A+GAY    +   +
Sbjct: 13  LLVLAFIKPDMSQTIATIAFYMALGQAVNIFVGLTGYVNFGYAAFLAMGAYGLGVAIAYM 72

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                 ++ + + +   ++G   + +G  +L+ R  Y AIAT+ ++E  ++++I      
Sbjct: 73  PQLGVWTLPVGLLLGMALAGGLALAIGAVALRLRSAYFAIATIGINEALKDLIIGAGIWG 132

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                               ++ + +   ++  +  +    ++L   FL+      L+  
Sbjct: 133 GSS-----------GLVLGYNMFQEYGRDTALFLSTVGSTVLILATGFLAVVATYLLQSK 181

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG--AFFAASRDRISPDMFK 262
               A   IR ++ A   +       KL AF +SS F  + G   F  A+        FK
Sbjct: 182 EAGYALAAIRQDEDAAKVMGINPTKYKLLAFTLSSIFSALLGSAVFPLAATQVFPDTAFK 241

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
               +  ++++ LGG  +++       + + +          Y + +        +    
Sbjct: 242 VDYILDGLAVMFLGGAGTVTGAIAGGLLYVPLRLFVGQFFPNYQSLVTPLLVLLLVLFAP 301

Query: 323 LMVIA 327
             +I 
Sbjct: 302 RGIIG 306


>gi|158315028|ref|YP_001507536.1| inner-membrane translocator [Frankia sp. EAN1pec]
 gi|158110433|gb|ABW12630.1| inner-membrane translocator [Frankia sp. EAN1pec]
          Length = 684

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 112/302 (37%), Gaps = 19/302 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L +V  L++ +         Y   +    L Y +     ++  G  G+L L+ +I    G
Sbjct: 329 LGLVPFLVVAILPLVFSGSPYWLGLTAVGLCYGVVYLTFTVATGEGGMLWLSQIIFAGAG 388

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A       + + L + + + +   ++   G ++GL +++    Y+ +ATL    + + ++
Sbjct: 389 AIGAAQFATVWHLPVLVAVVLGGAVAAVAGALLGLLTIRLGDLYVGLATLTFGLLVETLI 448

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                      G+ +                       +   ++   Y+ L +  + A++
Sbjct: 449 FTRNRFQQSGMGVLLPRP-------------------GWATDDLSFAYLALAVFVVFAAL 489

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRR+    A R +RD++ A  +L  +++  K+   A+++    + G F +       
Sbjct: 490 TWNLRRSTSGLALRGVRDSEPAARTLGLSVVQVKVIVGALAAFVAAVGGGFVSMYTMVAQ 549

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           P  +     ++ ++I++  G+ S++  A +      +  +           +L       
Sbjct: 550 PSSYATFAGLVWLAIMVSLGIRSITAAAVSGLSYTLLQGVLQTYAPARLGGILPILFGLA 609

Query: 318 MR 319
             
Sbjct: 610 AI 611



 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 89/295 (30%), Gaps = 11/295 (3%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA-YAIGAYSYVILGSRYGLSIWLL 95
           +Y+ +      IY + +  L I   S G+ +       + +  + Y +       ++   
Sbjct: 3   QYVLAGLALGSIYAIASSALVITYVSTGVFNFAFGSMAFFVARFYYWLNSEHGMSTVSAG 62

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +    +++   G+++     +F      +  ++ +      L     +  G   I  A  
Sbjct: 63  LLSILVMAPLLGVLLYGALFRFMRGSSMLVKIVSTIGLSVALPPISDLIFGTDTITSAPG 122

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           L  L      +          + Y   ++ V+ G   L          T +    R + D
Sbjct: 123 LASLNDKPYHVFGTVVTTDQLITYGFLVFTVVAGTAVLRL--------TDVGLRVRAMVD 174

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           ++       T      L  +A SS   G+AG   A +    +  M         I+ V+ 
Sbjct: 175 SEAMASLSGTNPGRVSLGVWAASSTLAGLAGILVAPTNGLNTGGMTSL--MCAAIAAVVA 232

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
             + SL     A   +  + ++                 S       + ++   +
Sbjct: 233 ARLRSLPGAVAAALAMGVITDVIQKYLPTNSTLTAAIVPSIPFAFMLVFLVFYVV 287


>gi|159898639|ref|YP_001544886.1| monosaccharide-transporting ATPase [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159891678|gb|ABX04758.1| Monosaccharide-transporting ATPase [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 368

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 92/319 (28%), Gaps = 18/319 (5%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQ-------KYIDSMGIQILIYVMFAWGLSI 58
           +R ++   +L   AV+            +           +  +       ++ A G+++
Sbjct: 10  IRESRLFWVLTAWAVILGFNALFIPEFFRINIQDGHLYGNLIDVLNNGAPLMLVALGMTL 69

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           V+   G + L+     AI A    +L +       +        +     +  +      
Sbjct: 70  VIA-TGGVDLSVGAVMAISAAMGAVLINPAPGDKLVS-NEILTRNATNTPLAIIVLATLA 127

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
              L      +      I      +    AG  +A  +            +F F + +++
Sbjct: 128 AGTLCGLWNGLLVSRAKIQPLVATLILMVAGRGIAQLITNGQIITIYYTPYFWFGNGYIL 187

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                 Y++  +        + +R+T I      +  N KA +    +    +L A+  S
Sbjct: 188 GLPVSIYIVTAVA---IIAWVGVRKTPIGLFIEAVGINPKATYYSGISAKNVQLLAYTFS 244

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT------SLSKIAKATAILI 292
                +AG   ++       +    +  +  I  V++GG        SL        ++ 
Sbjct: 245 GFCSALAGLILSSYVHSADGNNNGLNYELDAILAVVMGGTMLSGGRFSLLASVLGAMVIW 304

Query: 293 GVVELCCGMNFYYFNSLLK 311
                   +       L  
Sbjct: 305 TFTLSMYTLGVPANALLAG 323


>gi|222055888|ref|YP_002538250.1| inner-membrane translocator [Geobacter sp. FRC-32]
 gi|221565177|gb|ACM21149.1| inner-membrane translocator [Geobacter sp. FRC-32]
          Length = 291

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 88/308 (28%), Gaps = 26/308 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y  S      IY +   G SI+  + G+++        +G              +W  +
Sbjct: 6   QYSLSGLATGAIYALIGIGFSIIYNATGIINFAQGEFVMLGGILTFFFLDILQFPLWGAV 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++   +  CG++    +++       I  +I++     ++     +  GK         
Sbjct: 66  PMAVAGATLCGLLFERLAIRPLAKASPINLVIITIGGSILIRGLAMLVWGKDTHS----- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 V S                   +++     +      +   T    A R    N
Sbjct: 121 ------VPSFSGDDPISIGSATLLPQHLWIIGITLVVICLNKYFFYHTISGKAMRACAYN 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   +   +    L +F +SSA   MAG   A                +      I+G
Sbjct: 175 PRAAGLVGIDVKRMVLLSFVISSAMGSMAGIIIAPLTMTA--YDVGVMLGLKGFCAAIIG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM++   +     +L  +  L  GM    +   + F     +                R 
Sbjct: 233 GMSTGMSVVVGGLLLGVLESLGAGMISSGYKDAIAFIILLLILFI-------------RP 279

Query: 337 HSLLRLRT 344
             L     
Sbjct: 280 QGLFGKAE 287


>gi|271499284|ref|YP_003332309.1| inner-membrane translocator [Dickeya dadantii Ech586]
 gi|270342839|gb|ACZ75604.1| inner-membrane translocator [Dickeya dadantii Ech586]
          Length = 346

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 98/310 (31%), Gaps = 15/310 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  +          +++ I ++  ++ IY + A G++ V+ + G + L+     
Sbjct: 33  VLIFMILLLIFFQSQNSNFLTERNITNILTEVSIYGIMAVGMTFVILTAG-IDLSVGSIL 91

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +   +              +    G   ++     L        +  L ++   +
Sbjct: 92  AVCAMTAAYVIKGDN----FTTVDAQAWGGMSWLVGLGICLAMGTVIGFLHGLGVT---R 144

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L  +     G         +   G  +      +R+     +  + +   +  +  L 
Sbjct: 145 LRLSPFIVTLGGMTIWRGLTLVVNDGAPIAGFDPGYRWWGRGELLGVSIPIWIFALVALV 204

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + L   +T        I  N +A       +    +S + V     G+AG   +A   
Sbjct: 205 GWLAL--HKTRWGRFVYAIGGNTEAARLAGVNVQRVLVSVYVVIGMLAGLAGFILSARLG 262

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                     E  ++ S+VI     +GG   +S     + I+  ++     MN   +   
Sbjct: 263 SAEAVAGISFELRVIASVVIGGTSLMGGYGRISGTIIGSVIMGILINGLVLMNVSAYYQQ 322

Query: 310 LKFDCSFNMR 319
           +       + 
Sbjct: 323 IITGLIIVLA 332


>gi|158425729|ref|YP_001527021.1| putative branched-chain amino acid transport system permease
           protein [Azorhizobium caulinodans ORS 571]
 gi|158332618|dbj|BAF90103.1| putative branched-chain amino acid transport system permease
           protein [Azorhizobium caulinodans ORS 571]
          Length = 308

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 95/301 (31%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I   ++V+ + GL+I+ G +G++++       +GAY   +    +      L  +   +
Sbjct: 22  LILFSVFVLMSLGLAIIFGQMGVINMAHGEFMILGAYMTYLTSQLFQAYAPGLYGIYFFV 81

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           + A   ++           L     +       +L  W      +           +G  
Sbjct: 82  AMAVAFVVSGGLGMLVEWGL--IRFLYKRPLDTLLATWGLSLIMQQAFRSIFGAREVGVE 139

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   +      +  +  +I   +V+     ++ ++ L + R+      R +  N+    +
Sbjct: 140 LPEWMMGSLAVTDTIEVQINGLFVMGLTTLIAVAVYLLMFRSRWGLQVRAVVLNRTMAGA 199

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +  +        F +     G+AG+ F       +         +    +V+ GG  SL+
Sbjct: 200 VGISTERVDRMTFGIGCGIAGVAGSAFTMIGS--TGPTAGQLYIVDTFLVVVFGGAASLA 257

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               +   +                               L ++ +  ++++R   L  L
Sbjct: 258 GTIASAFTISQAQSTMEFFMSGSMAK-------------VLTLLVVVGILMLRPEGLFVL 304

Query: 343 R 343
           +
Sbjct: 305 K 305


>gi|229846588|ref|ZP_04466696.1| ribose ABC transporter permease protein [Haemophilus influenzae
           7P49H1]
 gi|229810681|gb|EEP46399.1| ribose ABC transporter permease protein [Haemophilus influenzae
           7P49H1]
          Length = 322

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 88/301 (29%), Gaps = 23/301 (7%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           + +      S   I ++  Q  +  + A G++ V+   G + L+     A+       + 
Sbjct: 30  VSMINPDFFSVDNILNILRQTSVNAIIAVGMTFVILIAG-IDLSVGSVLALTGAIAASMV 88

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           S       ++  V  + +   G+   + +                + F   L+    +  
Sbjct: 89  SIELPIFLVIPVVLLIGTLLGGISGVIVAK------------GKVQAFIATLVTMTLLRG 136

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                     +    +    L     F S    Y + +   +  M  + A     L+ T 
Sbjct: 137 ITMVYTDGRPITTGFSDNADL-----FASIGTGYVLGIPVPIWIMSIVFAVAWYILKHTP 191

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           I      +  N+ A       +   K+  FAVS     +AG    +      P      E
Sbjct: 192 IGRYIYALGGNEAATQLSGINVNKIKVFVFAVSGFLSALAGLIVTSRLSSAQPTAGVSYE 251

Query: 266 NIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              + ++V+     +GG   +        I+  +      ++   +  ++       +  
Sbjct: 252 LDAIAAVVVGGTSLMGGKGRVMGTLIGALIIGFLNNALNLLDISSYYQMIAKALVILVAV 311

Query: 321 T 321
            
Sbjct: 312 L 312


>gi|154249223|ref|YP_001410048.1| inner-membrane translocator [Fervidobacterium nodosum Rt17-B1]
 gi|154153159|gb|ABS60391.1| inner-membrane translocator [Fervidobacterium nodosum Rt17-B1]
          Length = 292

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 93/299 (31%), Gaps = 22/299 (7%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                +Y + A GL ++    G+++           Y    L S  GL++++ I +  + 
Sbjct: 9   LSTGAMYSLVAIGLVMMYKVSGVMNFAYGNMGMFATYIIWWLTSALGLNMYVSIIMGIIF 68

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +   G+ +    L+        + LI++     IL        G     + +        
Sbjct: 69  AALMGIFVERFGLRPIRHLSHGSMLIVTFGLLMILEGLAVQIWGTEYKSLPEL------- 121

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           V      F+     ++       V   +  +S  I L+++ T    A R + +N++    
Sbjct: 122 VTGTPYIFKGDFGIIVLRRQDVLVFTTLVVISVLIALFMKFTKFGIAVRAVSENEEIAGY 181

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +      ++A   +   + G   A                I   +  +LGG  + +
Sbjct: 182 MGINVGKILAFSWAFGVSMAALVGIIAAPKVFV--SPTMLTFYQIQGFTAAVLGGFETFT 239

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  IL  + +L        F + +                 + +V++     L  
Sbjct: 240 GAVFGGLILGVIEKLVGNYISEGFKATISL-------------AIIIIVLVFFPKGLFG 285


>gi|319785016|ref|YP_004144492.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170904|gb|ADV14442.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 287

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 88/304 (28%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   +Y +FA GLS+V G + L++L       + AY  ++  +  GLS W+   +
Sbjct: 7   LVQGILLGGLYALFAAGLSLVFGIMRLVNLAHGDLIILAAYLVLMGVTLLGLSPWIAALI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +    G ++    L        +  L+++      L              +      
Sbjct: 67  AMPVMFGLGWLLQAAVLNRVLGKDILPPLLVTFGLSVALQNGLLEAFSADSRRIP----- 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +         V   I              ++      TA+  A+R   D+  
Sbjct: 122 -----VGALEGASLDLGLVTVGIMPLMTFASAIVTIIALNALFYHTALGRAFRATSDDAV 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +          A  ++   + +A  +     +         +  I     VI+GG+
Sbjct: 177 TAGLMGIEPKRIFAIATGIAMVVVTLAALYLGMRANF--DPSIGPARLIYAFEAVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        I+         +N  +                    IA   V+L+R   
Sbjct: 235 GSLWGTLAGGIIIGVAQTFGAALNPEW--------------QILAGHIAFLAVMLLRPRG 280

Query: 339 LLRL 342
           L   
Sbjct: 281 LFPR 284


>gi|116248871|ref|YP_764712.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253521|emb|CAK11913.1| erythritol permease, component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 350

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/313 (9%), Positives = 86/313 (27%), Gaps = 10/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +V   +         +      M   + I+ + A G+ ++V   G + L+     
Sbjct: 31  AFFALIVIIAVFSFLSPYYFTLNNFLIMASHVAIFGILAIGM-LLVILNGGIDLSVGSTL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       L     L+ + +I    + +                  +    +   ++  
Sbjct: 90  GLAGCIAGFLMQGVTLTYFGVILYPPVWAVVVITCALGAL----VGAVNGVLIAYLKVPA 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +             + + + L +     R  +    F          +   ++ +  L+
Sbjct: 146 FVASLGVLYVARGIALLMTNGLTYNNLGGRPELGNTGFDWLGFNRLAGIPIGVIVLAVLA 205

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L RTA          N++A       +   K+  + +S     +AG   ++   
Sbjct: 206 IICGIVLSRTAFGRWLYASGGNERAADLSGVPVKRVKIIVYVLSGVCAAIAGLVLSSQLT 265

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG  ++        ++  + +    +    +   
Sbjct: 266 SAGPTAGTTYELTAIAAVVIGGAALTGGRGTVRGTMLGAFVIGFLSDGLVIIGVSAYWQT 325

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 326 VFTGAVIVLAVLM 338


>gi|148256990|ref|YP_001241575.1| putative high-affinity branched-chain amino acid transport system
           permease [Bradyrhizobium sp. BTAi1]
 gi|146409163|gb|ABQ37669.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 297

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 101/306 (33%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A    ++  +  +++        IGA+   +L ++Y +  W+ +P+
Sbjct: 10  LVNGLVVGTLYGVVAMSFVLIYKATQVVNFAQGELLLIGAWVCWLLLTKYQVPFWVGMPL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +   A G+ + +  L+       I+ ++++     +         G            
Sbjct: 70  TLVFMFAFGIAVQVVILRPMIGEPIISVIMVTIGLSTVFQAALKWMFGVNPQPFPPVFA- 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +  +      L     +   +  + + +    A R    NQ+
Sbjct: 129 ----------SKAVDLFGLQIQTVYVMSLAVSVAMMLGMAWFFKASKYGLAMRATAFNQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  ++      A+A+S+    +AG   A      S         I V    ILGG+
Sbjct: 179 VAQSLGISVKNVFAMAWAISATVSAVAGVVVAVVNGVSSGLSAY---GIKVFPAAILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +  +   ++  Y +            +       L L+++++ + 
Sbjct: 236 DSVGGAVLGGIIIGLLENIAQYVDSQYLHW--------GNLYEIAPFYVLILILMIKPYG 287

Query: 339 LLRLRT 344
           L   + 
Sbjct: 288 LFGTKD 293


>gi|229490219|ref|ZP_04384066.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           SK121]
 gi|229322967|gb|EEN88741.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           SK121]
          Length = 291

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 86/305 (28%), Gaps = 23/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +       + + A G+ +VV      +          A +   +   YGL++W+ +P+
Sbjct: 7   WLAAIEIGAFFSLIALGMYLVVVGADFFNFAMGPYAMAAAMASSWVAINYGLALWIAMPL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++ A  ++     +K          L        +L   + +     G         
Sbjct: 67  GIAVAVALSILTEKLVVKQVQKRSGRGELPALVAVTAVLFGIQQLAGTVFGRTPLPGQKI 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                     F          +     +++G   +   I LWL R+      R + DN  
Sbjct: 127 FD--------FDPISVLGATVDSSTVVLVVGTAVIFVGIGLWLNRSTSGRLLRAVGDNPD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +   +L AF ++     +AG  FA             S  +     +++GG 
Sbjct: 179 AARVLGLPVDRVRLIAFTLAGVIAAVAGLLFAPKAGV--QFTSGLSWTLTAFIALVIGGT 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                      +L  V                           T +++   +    R   
Sbjct: 237 GRSWAPLIGGMVLGVVQVFAPYYFGA-------------SAAQTAILLIALVFFAFRPEG 283

Query: 339 LLRLR 343
           LL  +
Sbjct: 284 LLSRK 288


>gi|209885978|ref|YP_002289835.1| inner-membrane translocator [Oligotropha carboxidovorans OM5]
 gi|209874174|gb|ACI93970.1| inner-membrane translocator [Oligotropha carboxidovorans OM5]
          Length = 293

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 89/303 (29%), Gaps = 21/303 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I        +  + A GL +V G   +++L C   YA+GAY  +                
Sbjct: 8   ILGGAFHAAVLFLVAAGLQLVFGVQKIINLACGSFYALGAYFGITAVGIAMSLGLPAASF 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++  A  +I  +     R            ++     +        +       R   
Sbjct: 68  FPVVIAAGLLIGLVGFPIERVLRAVYRRDESYQLLITFGLLLMFQDVFRFVWGATPR--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T   + + +       V    +   V+     ++ ++ L+L++T      R   +N+ 
Sbjct: 125 --TMDNAYLVYGVADIFGVRVPTYNLLVIAASIGIAVALGLFLQKTRTGRIVRATAENRD 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       F V      + GA    S    +         +   ++V++GG+
Sbjct: 183 MAEGLGVNVSKIFALVFTVGCMLGTVGGALVVPS--SAASLEMAVELVVEAFAVVVIGGL 240

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+S       I+  +      +                      + + +  V++++   
Sbjct: 241 GSMSGALVGALIVGLMRAASISI--------------MPEMELLSVYLVVVAVLILKPAG 286

Query: 339 LLR 341
           L  
Sbjct: 287 LFG 289


>gi|153011052|ref|YP_001372266.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
 gi|151562940|gb|ABS16437.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
          Length = 289

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 86/303 (28%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y       + GL+    I ++
Sbjct: 9   VDALAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMIGGYFASYAAQQLGLNYGFAIIIA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + +    + +     +       +  ++M+      +I       G            L
Sbjct: 69  VVGTMIIAVPVERLLYRRIYGAPELTQVLMTIGITFCIIGLTNYIFGPT----------L 118

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T     +        F        + +     ++  +   + RTA     R   DN   
Sbjct: 119 KTIPLPEMLRGSVDLGFRAIAKHRIFAIGCGFAVALGLWYIIERTAFGVKLRAAVDNANM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FA++       G   A          +     +  + +V +GG  
Sbjct: 179 AAALGVRTEIVYAISFALAIGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L  +      +                        +A+ +++ +    L
Sbjct: 237 SIPGALIACLLLGAIDTTGRYLA--------------PEYGEFFFYLAVIVIVTLFPRGL 282

Query: 340 LRL 342
              
Sbjct: 283 AGR 285


>gi|321313139|ref|YP_004205426.1| ribose ABC transporter permease [Bacillus subtilis BSn5]
 gi|320019413|gb|ADV94399.1| ribose ABC transporter (permease) [Bacillus subtilis BSn5]
          Length = 322

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 102/312 (32%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L   +  +++ +   +      I ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 25  FLGLFILVIIVSILNPSFLEPLNILNLLRQVAINGLIAFGMTFVI-LTGGIDLSVGAILA 83

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     +         L I +  +I    GMI GL   K +      ATL    +F+ 
Sbjct: 84  LSSALVAGMIVSGVD-PVLAIILGCIIGAVLGMINGLLITKGKMAPFI-ATLATMTVFRG 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L   F F      Y + +    + M     
Sbjct: 142 LTL-----------------VYTDGNPITGLGTNFAFQMFGRGYFLGIPVPAITMVLAFV 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + + L +T        I  N+KA       +   K+  ++++     +AGA   +    
Sbjct: 185 ILWVLLHKTPFGRRTYAIGGNEKAALISGIKVTRVKVMIYSLAGLLSALAGAILTSRLHS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P   +  E   + ++V     + GG   +        I+  +      +    F  L+
Sbjct: 245 AQPTAGESYELDAIAAVVLGGTSLSGGRGRIVGTLIGVLIIGTLNNGLNLLGVSSFYQLV 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKGIVILIAVLL 316


>gi|253987536|ref|YP_003038892.1| ribose ABC transporter permease protein [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253778986|emb|CAQ82146.1| ribose transport system permease protein [Photorhabdus asymbiotica]
          Length = 323

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/313 (9%), Positives = 86/313 (27%), Gaps = 25/313 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V  +++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 24  LIALLVLIIVVSSLSPNFFTLDNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L      ++  ++   A+ +        + +                + F  
Sbjct: 83  LTGAVAASLVGMDVNALVAIVSGLALGAAIGAGTGIIIAK------------GKIQAFIA 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +    L  +F       I       +++ +     
Sbjct: 131 TLVMMLLLRGITRVYTDGSPINTGFSDNADLFSWFGIGRPLGIPTPVWLMLIVFVIAWYI 190

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 191 L-----HYTRLGRYIYALGGNESATRLSGISVDKIKIIVYSLCGLLTALAGIIEVARLSS 245

Query: 256 ISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
               M      +  I+ V+LGG         +        IL  +      +       +
Sbjct: 246 AQ-PMAGNGYELDAIAAVVLGGTRLSGGKGLIVGTLIGALILGFLNNGLNLLGISSNYQM 304

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 305 IVKAIVILLAVLI 317


>gi|170693370|ref|ZP_02884530.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
 gi|170141900|gb|EDT10068.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
          Length = 328

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 49/323 (15%), Positives = 106/323 (32%), Gaps = 26/323 (8%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGA-TKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
           FS RL    ++  L+A+V     F+   +   S + +  +  Q ++  + A G +++V  
Sbjct: 14  FSDRLPSLAEVGPLIALVLACAFFISQSSRFLSFQNLSLILQQTMVVAVIAIGQTLIV-L 72

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G + L+C +  A G+          GL   + I      S   G++ G+   + +    
Sbjct: 73  TGGIDLSCGMVMAFGSIIMTKFAVTLGLPPAVAILCGIAASTLFGVLNGVLITRIKLPAF 132

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
            +    ++  F    I                      +          F ++F +    
Sbjct: 133 IVTLGTLNIAFALTQIY-----------------SNAESVSNLPDAIMFFGNTFKLGPAD 175

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           + Y  +    +  +    LR T        + +N +A   +  +     L+ + ++ A  
Sbjct: 176 VTYGTVLTLLMYLATWFVLRDTVPGRHLYALGNNAEAARLMGLSSQKILLTVYTLAGAIY 235

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVE 296
           G+A     +    +       +EN+  I+ V+L      GG  S+S       I+     
Sbjct: 236 GVAALLSVSRTG-VGDPQAGQTENLDSITAVVLGGTSLFGGRGSISGTLLGALIVGVFRN 294

Query: 297 LCCGMNFYYFNSLLKFDCSFNMR 319
               +       +L       + 
Sbjct: 295 GLTLIGVSSVYQVLITGMLVILA 317


>gi|154503239|ref|ZP_02040299.1| hypothetical protein RUMGNA_01063 [Ruminococcus gnavus ATCC 29149]
 gi|153796233|gb|EDN78653.1| hypothetical protein RUMGNA_01063 [Ruminococcus gnavus ATCC 29149]
          Length = 349

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 96/314 (30%), Gaps = 23/314 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              +  +L ++Y     L  G+    + I S           + G++ V+   G +  + 
Sbjct: 42  RIVLCFVLLLMYAFFCALTQGSFFGIERILSTLNYAYFLGFLSLGVTFVIA-TGGIDFSI 100

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                  A       + +G+ + + + +S +I    G+  G     +       +   M+
Sbjct: 101 GPVMFCCALISGYCFTSHGMPMPVALILSIVIGLIFGIFNGYLVAYWSVPSFITSMASMN 160

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                            +       + +                  +   + ++  +  +
Sbjct: 161 IS-----------KGVASVFTKTQSVSWPQEMQDGGWFRKIISIDGIPVGLIIFLAVAIV 209

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
           C       + L +T +      +  N++A       +   ++SA+ +    +G++  F+ 
Sbjct: 210 C------AILLNKTKLGRYILCLGSNKEAVRLSGVNVKKWEMSAYIICGILVGISAIFYT 263

Query: 251 ASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A+   + P       N  +   V+      GG+ S+S       I+  + E    + F  
Sbjct: 264 AAYTTVQPGYGDQYNNEAIAGCVMGGTSMAGGLASISGTVIGVFIIALLQEGILALGFTK 323

Query: 306 FNSLLKFDCSFNMR 319
              L+       + 
Sbjct: 324 DYQLIITGLIVIVA 337


>gi|127513537|ref|YP_001094734.1| inner-membrane translocator [Shewanella loihica PV-4]
 gi|126638832|gb|ABO24475.1| inner-membrane translocator [Shewanella loihica PV-4]
          Length = 297

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 92/306 (30%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  I  L+Y +      +V  S  +++        +GA+      + + L  ++    
Sbjct: 10  IINGLIVGLLYGVVGMCFVLVYKSTQIVNFAQGEFLLVGAWVCWAFLTYFQLPFFVGFLF 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G+++ +  L+       I+ ++++               G +          
Sbjct: 70  TLCFMAVFGVLLQMIVLRPMIGEPIISVIMVTIGLSIFFQSLTKWIFGVSPQSYPQVFDT 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +  E+      +    + A+  L+ + +    A R    +Q+
Sbjct: 130 -----------QSIAIFGLNIELAYLMSTVIAILIMAAFFLFFKYSKHGLAMRATAFDQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  ++      ++ +++     AG                 +  I V   VILGG+
Sbjct: 179 VAQSLGISVKQVFAMSWGIAATVSATAGVVIGMVNGVSDSLS---TIGIKVFPAVILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  +  +    +  + +            +       L +++  + + 
Sbjct: 236 DSIVGAIVGGVVIGVLENIAEFFDSQWLH--------IGNMYDIAPFYVLLVILWFKPYG 287

Query: 339 LLRLRT 344
           L   R 
Sbjct: 288 LFGTRD 293


>gi|33595109|ref|NP_882752.1| putative branched-chain amino acid transport permease [Bordetella
           parapertussis 12822]
 gi|33565186|emb|CAE35984.1| putative branched-chain amino acid transport permease [Bordetella
           parapertussis]
          Length = 329

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 59/314 (18%), Positives = 113/314 (35%), Gaps = 23/314 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A     +L L L          S    ++++V  A  ++I VG  G L    V+ Y +G
Sbjct: 27  IATGIFAVLTLSLAVVPMATSNISFAFYLMLWVTIASAMNICVGFTGYLPFGFVVFYGVG 86

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  I     G  I   +  ++++     ++   P+L+ RG Y  I +L ++ I + ++
Sbjct: 87  AYTTGICYKVLGWPILPSLAAASVVGLLIALL-FAPTLRLRGVYFGIVSLALATIMRLLI 145

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                   G +                          S        YY +L +   + + 
Sbjct: 146 SNLPDGFTGGS---------------------MGLILSSANSPTHSYYAMLAVMAATLAT 184

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           + WL  + +  A + IRD+  A   +   +   +L A+ +++ F  +AG   A   + + 
Sbjct: 185 VAWLSVSRLGKALKAIRDDDAAAACVGIHVPRTRLKAWLLAALFPALAGGIEAWYTNVVD 244

Query: 258 PD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P+  F        I   + GG  ++      T  L+G+  L           LL      
Sbjct: 245 PEYAFHVLITAKSIIYAMAGGFGTIIGPVVGTLALLGIDHLIWQKFPVLNLLLLGLVIVL 304

Query: 317 NMRHTTLMVIALFL 330
            M      ++   L
Sbjct: 305 LMLFLPRGIVGSLL 318


>gi|302562407|ref|ZP_07314749.1| branched-chain amino acid ABC transporter [Streptomyces
           griseoflavus Tu4000]
 gi|302480025|gb|EFL43118.1| branched-chain amino acid ABC transporter [Streptomyces
           griseoflavus Tu4000]
          Length = 298

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 86/307 (28%), Gaps = 19/307 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             I        +Y + A G  ++  + G+L+         G Y   +L    G +  L +
Sbjct: 6   DNILGGLALGAVYALVALGFVVIFKASGVLNFAHGSLLLFGGYLTAVLHDDLGFAGALAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V    + A  +   L     +  + A    I++     +L        G          
Sbjct: 66  AVLTTAALAGALDRFLLQRGGQDAHSAHVQTIVTIGIDIVLFTDLARRIGGD-------- 117

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                ++             +         ++    +  ++    R T+   + R   ++
Sbjct: 118 ---LLSLGDPWGDSVTRLGPLTVADSRLAAIVVSAVVIGAVFALFRYTSWGLSLRAAAED 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   +   +   +  A    +  +    A F A+      +       +      ILG
Sbjct: 175 LEAAALMGVRLGRVRAGA-WCLAGALAALAAVFLAAFPAPGLERTTGQIALNAFPAAILG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S +     + I+     L  G           F               + LV+L+R 
Sbjct: 234 GLASPAGALAGSLIIGLTEALVVGYQSDLHILGEGFGDVAP-------YAVMLLVLLVRP 286

Query: 337 HSLLRLR 343
             L   +
Sbjct: 287 TGLFGAK 293


>gi|238855926|ref|ZP_04646213.1| ribose transport system permease protein RbsC [Lactobacillus
           jensenii 269-3]
 gi|260664526|ref|ZP_05865378.1| ribose ABC transporter [Lactobacillus jensenii SJ-7A-US]
 gi|282933417|ref|ZP_06338797.1| ribose transport system permease protein RbsC [Lactobacillus
           jensenii 208-1]
 gi|313472027|ref|ZP_07812519.1| ribose ABC transporter, permease protein [Lactobacillus jensenii
           1153]
 gi|238831443|gb|EEQ23793.1| ribose transport system permease protein RbsC [Lactobacillus
           jensenii 269-3]
 gi|239530050|gb|EEQ69051.1| ribose ABC transporter, permease protein [Lactobacillus jensenii
           1153]
 gi|260561591|gb|EEX27563.1| ribose ABC transporter [Lactobacillus jensenii SJ-7A-US]
 gi|281302480|gb|EFA94702.1| ribose transport system permease protein RbsC [Lactobacillus
           jensenii 208-1]
          Length = 318

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/321 (13%), Positives = 90/321 (28%), Gaps = 23/321 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +L+    +  +  VV  +L+        +   + ++  Q  I  + A+G++ V+   G +
Sbjct: 7   KLDLSKYMALIALVVLVILITFLNPQFIAPSNLMNLLRQSSINCLIAFGMTFVI-LTGGI 65

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A        L           I    + +   G+   L S      Y  +  
Sbjct: 66  DLSVGSVLAFTGAVAATLILSGTPVWLACIVCLVLGAVLGGVNGFLIS------YGKVTA 119

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
            I +     I      +  G   I   +               F  P   +I  +     
Sbjct: 120 FIATLATMTIWRGATYVFTGGNPITGPNMNNSFFFQFIGNGYLFGIPFPVIITLLIF--- 176

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
                   A++ + L +TA       +  N+KA F          +  + +S     +A 
Sbjct: 177 --------AAVYILLHKTAFGRKTFALGGNEKAAFVAGVKTKKIIVVIYVISGLLAALAA 228

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
               +      PD     E   + S VI     +GG   +        ++  +      +
Sbjct: 229 LILTSRLSSAQPDAGTSYEMDAIASAVIGGASLMGGKGRMQGTLVGALLIATLSNGMNLL 288

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
               F   +       +    
Sbjct: 289 GINSFYQQIVKGLVILVAVMI 309


>gi|218782727|ref|YP_002434045.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218764111|gb|ACL06577.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 290

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 103/306 (33%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I       ++  + A GL+++ G +G+L+L     + + AY   +     G + WL +  
Sbjct: 12  IMHGLAYGMLLFLVASGLTLIFGMMGILNLAHASFFMLSAYFC-VSVIHMGGNFWLALLA 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I+ A G+++    L+       I  LI++     ++++   +  G     ++     
Sbjct: 71  APIITAAIGVMVERFLLRGIHASGHIGELILTVGVMMVIMEAVQVFWGTDSHMISVPPAL 130

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                + Y ++  +V+     +   ++L+L +T +    R    + +
Sbjct: 131 AGM----------VNIFGLQYPLYRLFVIFLALAILGLLVLFLFKTKMGMIIRAGVSDAE 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    +  FA  +   G+AG   +           +   +  V+ +V     
Sbjct: 181 MVEALGINMPLVFMMVFAAGTWLAGVAGVAISPLLSVFPGMADQMGMDAFVVVVVGG--F 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL     +      +                            LM + + LV+  +   
Sbjct: 239 GSLLGAFVSALFFGLLNSFGIQFLPRIAP--------------VLMFVFMVLVLSFKPKG 284

Query: 339 LLRLRT 344
           L   R 
Sbjct: 285 LFGERE 290


>gi|89899104|ref|YP_521575.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89343841|gb|ABD68044.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 290

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 103/305 (33%), Gaps = 22/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       ++  + A GL++ +G +  ++L       +G Y  V+L  ++G+   L +P+
Sbjct: 5   LFDGIAYGMLLFILAVGLAVTMGLMNFINLAHGAFAMVGGYITVLLMQKFGVPFLLCLPL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + S   G ++     +       +  ++ S     + +       G     +    + 
Sbjct: 65  AFVGSALLGALLERTLYRPLYHKPHLDQVLFSIGLTFMAVASADYFIGSGQQIIQLPEWL 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G T      +       +    +  +++     L+ ++   L +T   +  R   D+Q+
Sbjct: 125 KGRTEFGDGAWM------LGMGHYRLFIIAVCAALTVALQYVLTKTRFGSRLRASVDDQR 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L+ FAV S   G+ GA  A          F     I  + +V +GG 
Sbjct: 179 VAAGMGINVNLVFLTTFAVGSGLAGLGGALGAEVLGL--DPSFPLKFMIYFLIVVAVGGT 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S++    A  +L                               ++   +  +++ R   
Sbjct: 237 SSITGPLLAALLLGIADVAGKYYIPKLGG--------------FIVYSLMIAILIWRPQG 282

Query: 339 LLRLR 343
           L   +
Sbjct: 283 LFVRK 287


>gi|15804350|ref|NP_290389.1| ribose ABC transporter permease protein [Escherichia coli O157:H7
           EDL933]
 gi|25310293|pir||E86061 D-ribose high-affinity transport system [imported] - Escherichia
           coli (strain O157:H7, substrain EDL933)
 gi|12518610|gb|AAG58953.1|AE005606_9 D-ribose high-affinity transport system [Escherichia coli O157:H7
           str. EDL933]
          Length = 321

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 90/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                   Q 
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        +     ++G+ FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A       +   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYXLGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|329925984|ref|ZP_08280657.1| ribose transport system permease protein RbsC [Paenibacillus sp.
           HGF5]
 gi|328939515|gb|EGG35866.1| ribose transport system permease protein RbsC [Paenibacillus sp.
           HGF5]
          Length = 322

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 96/311 (30%), Gaps = 18/311 (5%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +     VV  L              I  + +   +  + A G + V+   G + L+    
Sbjct: 14  LALASLVVLVLFFTFSSSNFFQFSNIVGILLSTAVIGVLALGSTFVI-ITGGIDLSVGTV 72

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             +      +  + +GL + + I    +    CG++ G    K +               
Sbjct: 73  MTLSGVMTGVCITFWGLPVPVGILGGILTGALCGLLSGTAVAKMKIPPFIAT-------- 124

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
               +    I  G A I    +  +                 +++  + +   ++     
Sbjct: 125 ----LAMMMIAKGLALIISGAKPVYFNDAESFAEVSQGSVLGWLVPGLDIPNAVVIFFIA 180

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +    L L +T +      +  N++A       + F K+  + ++ AF G+AG   A+  
Sbjct: 181 AILGYLVLSKTILGRYNFALGSNEEATRLSGVNVGFWKIVIYTLTGAFTGLAGVMMASRL 240

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +  +P +    E   + ++VI      GG  ++        I+  +      ++      
Sbjct: 241 NSANPALGAGYELEAIAAVVIGGTSLSGGKGTIIGTVIGALIMSVLTNGLRILSVPQEWQ 300

Query: 309 LLKFDCSFNMR 319
            +       + 
Sbjct: 301 TVVVGFVIILA 311


>gi|297562984|ref|YP_003681958.1| inner-membrane translocator [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847432|gb|ADH69452.1| inner-membrane translocator [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 369

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 90/305 (29%), Gaps = 28/305 (9%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
            +    G   +      +  +  +    A G+++V+     L L+     A+        
Sbjct: 36  FVAARGGNLFTTANTVDLLTRSSLLGFLAVGMTLVI-LCRSLDLSVGYVAALSTVVAATT 94

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            +     I L +  +  ++   G++ GL     R +       +   I   +   ++   
Sbjct: 95  MAGDPSRIVLGVAAALGLAALIGLVNGLVVTGLRVNPFIATLGMGLVIKGYLDTNFQ--- 151

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G AG   A    F  T +                   +    L M  ++ + +L+L RT
Sbjct: 152 -GPAGAVPAAFQTFGYTRIG-----------------VLPVSTLVMLGVAVAAVLFLSRT 193

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            +      +  +               ++A  + S   G+AG   AA     S  ++   
Sbjct: 194 RMGYHIYAVGGDADVARLSGVRSGVPTVTAHVLCSVTAGVAGLLLAARFGTGSATVYSGG 253

Query: 265 ENIIVISIVI------LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             +  I+ V+      LGG   ++       IL  +  +   +    F   +        
Sbjct: 254 YELEAIAAVVLGGTYLLGGRGGVAGTVAGVLILATLDTVFNVLAVDPFVKDVLRGVIVIA 313

Query: 319 RHTTL 323
                
Sbjct: 314 AVAVY 318


>gi|167582182|ref|ZP_02375056.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis TXDOH]
          Length = 311

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 106/315 (33%), Gaps = 22/315 (6%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
            + +     L+  M   GL+++ G LG+L+      Y +GAY           S W+ + 
Sbjct: 7   NLLNGLSYGLLLFMLCAGLTLIFGMLGVLNFAHASFYMLGAY--AGCAIAARTSFWVALV 64

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            + +  GA G +     L+       +  L+++     ++ +   +  G         L 
Sbjct: 65  AAPLAVGAFGALCERTLLRRVRSGGHLDELLLTFGLAYLIGEGVKLVWG---------LA 115

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L   V +++    F     ++  +  ++      +  ++   LR +      R    ++
Sbjct: 116 PLTAPVPAVLDGAAFTVYGAVFPRYRVFMTSVSIAMLGALWAVLRVSQTGLVVRAALTHR 175

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A  +L   +       FA  +A   +AG   A     +       +   +V +++++GG
Sbjct: 176 AAVEALGHDVPRVMTLVFAAGTALAALAGVIGAPLA--VIEPAMAQTLGSVVFAVIVIGG 233

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT---------TLMVIAL 328
           + SL+    A+  +               ++      +                +  + L
Sbjct: 234 LGSLAGALVASLAVGCAQTFATASRASLGDAAQWAGIALPDAWRALTLAQLAPLIPYLLL 293

Query: 329 FLVILMRSHSLLRLR 343
             V+  R+  L   R
Sbjct: 294 VAVLPCRARGLFGER 308


>gi|121607292|ref|YP_995099.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121551932|gb|ABM56081.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 306

 Score = 59.9 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 86/308 (27%), Gaps = 20/308 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S       Y + A GL I   +   L+       + G++  + +      +       
Sbjct: 9   LVSGLASGGAYALVALGLGITFTTTKTLNFAHGDFVSAGSFIGLSVMLLLTGAPLGAGMD 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ----NILIKWKPITNGKAGIYVAD 154
           +  + G   ++    ++   G   ++  L     F        +                
Sbjct: 69  ALAVDGMAQLVALALAVLAMGLLGSVLYLTAVRPFAGKPGMAWVMSTIGFGIIVQSIGLA 128

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                   V +         + V        +++    + A     L+RT I  A R + 
Sbjct: 129 LWGPAPLKVPAPFGEEVIRIAGVGLRSQEILIIVTALAVMALFDFVLQRTMIGKALRAVA 188

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
            +++    +   +    L AF VS+   G+ G   A                +      I
Sbjct: 189 HDRRVASLMGIDVAAIMLGAFFVSAGLAGLCGYLLAPIASA--SLFMGLGIALKGFCGAI 246

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           LGG+T+         +L  +  L               +         ++   + LV+ +
Sbjct: 247 LGGLTNPRGCVLGGFVLGLLESLI--------------NLWQAQWREIVLFALVILVLAL 292

Query: 335 RSHSLLRL 342
           R + L   
Sbjct: 293 RPNGLFGR 300


>gi|330824085|ref|YP_004387388.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|329309457|gb|AEB83872.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 291

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 100/306 (32%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL---SIWLL 95
           + +      +Y++F+ GL+I+ G L +++      +  GA    ++           W  
Sbjct: 8   LFTALQISAVYILFSLGLTIIFGVLKVVNFAHGQFFTFGALVLSLVLRALAPSLGHGWAA 67

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
             ++ +   A  +  GL   +F    L    +    +   +++ ++ I     G  V   
Sbjct: 68  YLLAGLAGLAACLFAGLVVYQFGFKRLERDMIGSFILSAGLVLLFEGIMLEVFGGAVRPV 127

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
              L   VR            +        +L     L+A+II+ L+RT    A R +  
Sbjct: 128 PALLEGNVR---------LLGLTVSSQRLVLLAFAVLLTAAIIVLLQRTRFGKALRAVSI 178

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           + +A            L  F +++A   +AG   A            +         V++
Sbjct: 179 DHEAAMLQGVAYRQIALYGFLMATAVAAIAGMLIAPLAAVTPTLGDSYLVKG--FIAVVV 236

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S+      + ++  +             +               + + + +V+L+R
Sbjct: 237 GGMGSIVGAIVGSVLIALLESFVGFYFDPSLAN-------------LAIFVIVMVVLLVR 283

Query: 336 SHSLLR 341
                 
Sbjct: 284 PKGFFG 289


>gi|330468456|ref|YP_004406199.1| branched-chain amino acid ABC transporter permease [Verrucosispora
           maris AB-18-032]
 gi|328811427|gb|AEB45599.1| branched-chain amino acid ABC transporter permease protein
           [Verrucosispora maris AB-18-032]
          Length = 295

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 80/289 (27%), Gaps = 22/289 (7%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
             G +G++++        GAY+  +L      + W L+    +     G +  L      
Sbjct: 28  TFGQMGVINMAHGEFIMAGAYTTFVLQQVITAAGWSLLIALPVAFVVAGAMGVLL----- 82

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
                +   + +     +L+ W      +           + T    L+         + 
Sbjct: 83  --EFLLIRRLYARPLDTLLVTWGVSLILQQLARDIFGSPNVQTRAPELLTGNIALPGGIT 140

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                 ++L        ++ + LR T +    R +  N+                 F + 
Sbjct: 141 VANNRLFILALAGGAVVALTVALRITPLGRRIRAVVQNRDLAAVSGIATARVDRMTFFIG 200

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           S   G+AG                 +  I    +V++GG+  L         L  +    
Sbjct: 201 SGLAGIAGVALTLLGPI--GPTMGTNLIIDAFLVVVVGGIGQLKGTVIVAFALGVLQATG 258

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
             +                     ++ +A+   +  R   +  LRT S 
Sbjct: 259 EYLTTLSVAK-------------VMVFVAIVAFLQWRPQGMFTLRTRSL 294


>gi|306845723|ref|ZP_07478292.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO1]
 gi|306274044|gb|EFM55871.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO1]
          Length = 289

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 86/303 (28%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y       + GL+    I ++
Sbjct: 9   VDALAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMIGGYFASYAAQQLGLNYGFAIIIA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + +    + +     +       +  ++M+      +I       G            L
Sbjct: 69  VVGTMIIAVPVERLLYRRIYGAPELTQVLMTIGVTFCIIGITNYIFGP----------TL 118

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T     +        F        + +     ++  +   + RTA     R   DN   
Sbjct: 119 KTIPLPEMLRGSVDLGFRAIAKHRIFAIGCGLAVAVGLWYAVERTAFGVKLRAAVDNANM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FA++       G   A          +     +  + +V +GG  
Sbjct: 179 AAALGVRTEIVYAVSFALAIGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L  +      +                        +A+ +++ +    L
Sbjct: 237 SIPGALIACLLLGAIDTTGRYLA--------------PEYGEFFFYLAVIVIVTLFPRGL 282

Query: 340 LRL 342
              
Sbjct: 283 AGR 285


>gi|209515170|ref|ZP_03264038.1| Monosaccharide-transporting ATPase [Burkholderia sp. H160]
 gi|209504424|gb|EEA04412.1| Monosaccharide-transporting ATPase [Burkholderia sp. H160]
          Length = 328

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 51/322 (15%), Positives = 95/322 (29%), Gaps = 24/322 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R++K   I     V   L+  +F  +  S +YI           + A GL +V+  LG +
Sbjct: 19  RIDKPIVIAFACIVALLLVGGMFSRSFTSPEYILLQLKVGAFLGIIATGLMMVI-LLGHI 77

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+      +GA     +     L   L IPV        G++ G+     R   +    
Sbjct: 78  DLSLPWTITVGAMMACAVAGHGELGRILAIPVGIGCGALIGVVNGILVALLRIPSMI--- 134

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
                            TN  A   +            +        + +++  +     
Sbjct: 135 -------------ATLATNAVAQGIMIAYTGGSSPQDSAPEVMRWLAAGWLVPGVPNAVA 181

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           L  +   +   +L   RT        I + ++A +          ++AFAV SAF    G
Sbjct: 182 LWVVIGGATIFLL--SRTTFGRTLYAIGNTERAAYLSGINTRLVTVAAFAVCSAFAAFGG 239

Query: 247 AFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
              A    + +  M        + ++V     ILGG  S         ++  +  +    
Sbjct: 240 VLLAGYASKAAQSMGDAYLLPAIAAVVLGGTSILGGRGSYLGTVAGAILITLLQSILSVA 299

Query: 302 NFYYFNSLLKFDCSFNMRHTTL 323
                   + +           
Sbjct: 300 QMPEAGRQIIYGVVIAAMLLLY 321


>gi|161620706|ref|YP_001594592.1| hypothetical protein BCAN_B0649 [Brucella canis ATCC 23365]
 gi|163844786|ref|YP_001622441.1| hypothetical protein BSUIS_B0633 [Brucella suis ATCC 23445]
 gi|225629136|ref|ZP_03787169.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|254699879|ref|ZP_05161707.1| hypothetical protein Bsuib55_03327 [Brucella suis bv. 5 str. 513]
 gi|254705859|ref|ZP_05167687.1| hypothetical protein BpinM_02340 [Brucella pinnipedialis
           M163/99/10]
 gi|254711088|ref|ZP_05172899.1| hypothetical protein BpinB_12677 [Brucella pinnipedialis B2/94]
 gi|256015422|ref|YP_003105431.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella microti CCM 4915]
 gi|256029469|ref|ZP_05443083.1| hypothetical protein BpinM2_02240 [Brucella pinnipedialis
           M292/94/1]
 gi|256157665|ref|ZP_05455583.1| hypothetical protein BcetM4_02260 [Brucella ceti M490/95/1]
 gi|256253362|ref|ZP_05458898.1| hypothetical protein BcetB_03497 [Brucella ceti B1/94]
 gi|260167440|ref|ZP_05754251.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. F5/99]
 gi|260568070|ref|ZP_05838539.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40]
 gi|261220480|ref|ZP_05934761.1| inner-membrane translocator [Brucella ceti B1/94]
 gi|261313288|ref|ZP_05952485.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10]
 gi|261318678|ref|ZP_05957875.1| inner-membrane translocator [Brucella pinnipedialis B2/94]
 gi|261750353|ref|ZP_05994062.1| inner-membrane translocator [Brucella suis bv. 5 str. 513]
 gi|261756851|ref|ZP_06000560.1| bacterial inner-membrane translocator [Brucella sp. F5/99]
 gi|265986478|ref|ZP_06099035.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1]
 gi|265996170|ref|ZP_06108727.1| inner-membrane translocator [Brucella ceti M490/95/1]
 gi|161337517|gb|ABX63821.1| Hypothetical protein BCAN_B0649 [Brucella canis ATCC 23365]
 gi|163675509|gb|ABY39619.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|225615632|gb|EEH12681.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|255998082|gb|ACU49769.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella microti CCM 4915]
 gi|260154735|gb|EEW89816.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40]
 gi|260919064|gb|EEX85717.1| inner-membrane translocator [Brucella ceti B1/94]
 gi|261297901|gb|EEY01398.1| inner-membrane translocator [Brucella pinnipedialis B2/94]
 gi|261302314|gb|EEY05811.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10]
 gi|261736835|gb|EEY24831.1| bacterial inner-membrane translocator [Brucella sp. F5/99]
 gi|261740106|gb|EEY28032.1| inner-membrane translocator [Brucella suis bv. 5 str. 513]
 gi|262550467|gb|EEZ06628.1| inner-membrane translocator [Brucella ceti M490/95/1]
 gi|264658675|gb|EEZ28936.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1]
          Length = 289

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 86/303 (28%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y       + GL+    I ++
Sbjct: 9   VDALAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMIGGYFASYAAQQLGLNYGFAIIIA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + +    + +     +       +  ++M+      +I       G            L
Sbjct: 69  VVGTMIIAVPVERLLYRRIYGAPELTQVLMTIGVTFCIIGITNYIFGP----------TL 118

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T     +        F        + +     ++  +   + RTA     R   DN   
Sbjct: 119 KTIPLPEMLRGSVDLGFRAIAKHRIFAIGCGLAVAVGLWYAVERTAFGVKLRAAVDNANM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FA++       G   A          +     +  + +V +GG  
Sbjct: 179 AAALGVRTEIVYAVSFALAIGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L  +      +                        +A+ +++ +    L
Sbjct: 237 SIPGALVACLLLGAIDTTGRYLA--------------PEYGEFFFYLAVIVIVTLFPRGL 282

Query: 340 LRL 342
              
Sbjct: 283 AGR 285


>gi|110678206|ref|YP_681213.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter denitrificans OCh 114]
 gi|163732211|ref|ZP_02139657.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter litoralis Och 149]
 gi|109454322|gb|ABG30527.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter denitrificans OCh 114]
 gi|161394509|gb|EDQ18832.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter litoralis Och 149]
          Length = 289

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 97/295 (32%), Gaps = 26/295 (8%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG- 107
           Y M A GL+++   + +L+      Y IG +       ++G+   L + +S M     G 
Sbjct: 15  YAMIALGLTLIFALMNVLNFAHGQMYVIGGFVTYTFYGQWGVPFVLALFMSCMTLAIIGA 74

Query: 108 -MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
            +   L +   +G     +T++++     +L     +  G+               V  +
Sbjct: 75  LIERYLFAPVIKGSAREESTMLLAAGIAFLLDALILLIFGEK-----------QRGVPKI 123

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
           +         +I       + +       + I  ++ +    A R +  ++ A   +   
Sbjct: 124 VDGVFNWDFRLIMPYDRILICVLAILSIVAFIALMQYSKTGRALRALAQDRTAAQLMGVN 183

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +    +  FA+ +   G+ G                   +I    +V++GG   +S    
Sbjct: 184 VDRYSMIGFALGAMLAGLVGGLLVTITGV--NLGMGGPTSIKAFMMVMIGGAGVISGAIW 241

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              IL  +               L +   +      L+ ++L + + +R   L+ 
Sbjct: 242 GGFILGFMEAF-----------GLAYLSQYGDITYLLIFVSLMIFLAIRPQGLMG 285


>gi|300313932|ref|YP_003778024.1| branched-chain amino acid ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300076717|gb|ADJ66116.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 288

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 52/296 (17%), Positives = 106/296 (35%), Gaps = 27/296 (9%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           ++Y + A GLSIV G L  ++ +    + +GAY      +  GL  W  + ++ ++ G  
Sbjct: 16  MLYFLLAVGLSIVFGLLRFVNFSHGAFFLLGAYLC-FQVTDLGLGFWWSLLIAPLVVGLF 74

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
             I+    L+          ++ +     ++ +    T G  G  VA      G      
Sbjct: 75  AWIVERFVLRHVYALPHHFHILFTVGMALVIQEAVISTWGPLGNNVAPPDLLQGV----- 129

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                      +Y  +  +V+     ++  +   L  T + +  R   ++ +    L   
Sbjct: 130 -----VMWGGFVYPKYRLFVIGLTAVMALLLWWVLEGTRLGSIVRAGSESTEMVSLLGLN 184

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           I       FA+ +A  G+AGA  A  R              I   +V++GG+ S      
Sbjct: 185 INRIFSLVFALGAATAGLAGALAAPIRGA--DPFMGVEALGIAFVVVVIGGLGSFWGALI 242

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              ++  V  +   +              ++     ++ +A+  V+L+R + LL  
Sbjct: 243 GGILVGIVQSVMSTV--------------WSEGAHLMIYVAMAAVMLLRPNGLLGR 284


>gi|295699971|ref|YP_003607864.1| sugar ABC transporter inner membrane protein [Burkholderia sp.
           CCGE1002]
 gi|295439184|gb|ADG18353.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 329

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 90/309 (29%), Gaps = 23/309 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+             S + +  +  Q ++  + A G +++V   G + L+C +  A
Sbjct: 28  LIALVLACGFFISQSSRFLSFQNLSLILQQTMVVAVIAIGQTLIV-LTGGIDLSCGMVMA 86

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            G+          G+   L I      S   G++ GL   + +     +    ++  F  
Sbjct: 87  FGSIIMTKFAVVLGVPPILAILCGIGASTLFGLLNGLLITRIKLPAFIVTLGTLNIAFAL 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             I                      +          F S+F +    + Y  +    +  
Sbjct: 147 TQIY-----------------SNAESVSNLPDAIMFFGSTFKLGPAEVTYGTVLTLLMYL 189

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    LR T        + +N +A   +  +     L  + ++ A  G+A     A    
Sbjct: 190 ATWFVLRDTVPGRHLYALGNNAEAARLMGLSSQRILLIVYTLAGAIYGIAALLSVARTGV 249

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P   +      + ++V+      GG  S+        I+         +       +L
Sbjct: 250 GDPQAGQTENLDSITAVVLGGTSLFGGRGSIVGTLLGALIVGVFRNGLTLIGVSSVYQVL 309

Query: 311 KFDCSFNMR 319
                  + 
Sbjct: 310 ITGILVILA 318


>gi|224369227|ref|YP_002603391.1| LivH3 [Desulfobacterium autotrophicum HRM2]
 gi|223691944|gb|ACN15227.1| LivH3 [Desulfobacterium autotrophicum HRM2]
          Length = 286

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 89/303 (29%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I    +  ++Y + A GLS++ G + +++        I  Y    LG  + +        
Sbjct: 8   ILDGLMNGMLYALVAVGLSLIWGVMDVINFGHGEFLMIAMYVSYWLGFIFHIDPLFSWLA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S         +     +K       +++L+ +     +L                     
Sbjct: 68  SGAFVFFLAALTYQLIIKHTVGKPPLSSLLATFGLAMVLKNICLNRFSPN---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +++         VI  +      L    + A + + + RT +    +    +++
Sbjct: 118 FRLLSDTVLGGKVLHMGDVIVSMPQLITALFSLAVMAMVYVIIHRTRLGWTIQATAMDKE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +        L  F +  A +G+AG    +               +I   IV +GG 
Sbjct: 178 AAELMGINTEKIYLLVFGMGGACVGIAGGLMPSYLAV--HPEVGTLFGLIAFVIVAMGGF 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++  V  L        F  +  F                 +V+++R   
Sbjct: 236 GSIPGALLAALLIGLVEALSGFYIAPVFKYVAVFGLY-------------LVVVMIRPKG 282

Query: 339 LLR 341
              
Sbjct: 283 FFG 285


>gi|221639344|ref|YP_002525606.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131]
 gi|221160125|gb|ACM01105.1| Inner-membrane translocator precursor [Rhodobacter sphaeroides
           KD131]
          Length = 431

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 98/274 (35%), Gaps = 21/274 (7%)

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            + L  P   +++      +G  +L  R DYLAIATL ++EI   ++     +  G   +
Sbjct: 158 PVLLAWPAGGLLAALAAWAIGKTALGLRSDYLAIATLGIAEIIIAVMKNEDWLARGVKNM 217

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL--------- 201
               R       ++    F  +   +    +    +++ +C+ +  + +           
Sbjct: 218 ISLPRPVPYEVDLQQSAGFVAWAQGWGYDPVTASAIVVKLCYAALFVAVLAIIVTLSELA 277

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R+      R IRDN+ A  ++   +    L  F + +A IG+AGA       +++P  +
Sbjct: 278 LRSPWGRMMRAIRDNEVAAEAMGKDVTRRHLQIFVLGAAVIGIAGAMMTTLDSQLTPGTY 337

Query: 262 KFS-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR- 319
                  +V  +VI+GG  S         ++  +  +   +      ++       +   
Sbjct: 338 NPLRFTFLVWVMVIVGGSGSNWGAVLGGFLIWWLWVMVEPIGLSLLGAITAGMADGSWLK 397

Query: 320 ----------HTTLMVIALFLVILMRSHSLLRLR 343
                         M + L LV+      L+  R
Sbjct: 398 AHLQDSAAHMRLLTMGLILLLVLRFSPRGLIPGR 431



 Score = 36.8 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 27/69 (39%)

Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
          G  +S      +    LI  + A G+++  G  GL ++  +   A+G  + V+  ++   
Sbjct: 19 GVLQSWNSALGILNMALISAIMALGVNMQWGYAGLFNVGVMGFVALGGLAVVVTAAQPVP 78

Query: 91 SIWLLIPVS 99
            +      
Sbjct: 79 GAFAAGGWG 87


>gi|160938711|ref|ZP_02086063.1| hypothetical protein CLOBOL_03606 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438410|gb|EDP16169.1| hypothetical protein CLOBOL_03606 [Clostridium bolteae ATCC
           BAA-613]
          Length = 329

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/338 (11%), Positives = 99/338 (29%), Gaps = 36/338 (10%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M    ++         L  +   +L      +  + + + ++  Q  +  M A G+++V+
Sbjct: 1   MKRIQIKTLLKRHNAILGLIFMIILAACINKSFLTLENLTNVLRQASMNGMIAVGMTMVI 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
              G + L+      +  Y  +   +    S+ L + V  +     G I G    K +  
Sbjct: 61  -ICGSIDLSVGTMIGLCGYIALYFSNY---SLILAVIVPLLTGVIVGTINGFLINKIKIA 116

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
                   M  +    L+                 L    T   S            +  
Sbjct: 117 PFIATLATMMAVKGTTLV-----------------LTNENTYFASNSIEQFQYIGRGLLA 159

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
            ++    +     + +    LR T +      +  N +A   +   +    + +   +  
Sbjct: 160 PYVTVPSVMFICCAVAGAYILRHTMLGRNMYAVGGNTEAARMMGVNVEKTLMFSHIFTGG 219

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVV 295
              +AG    +      P   +  E  ++ + VI      GG   +S       I+  + 
Sbjct: 220 MAALAGITLVSRVGAAYPLAGEGKELDVIAACVIGGTALTGGKGHISGTFIGVLIMGMLT 279

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
            +            ++   +       + ++ L +V++
Sbjct: 280 NIFN----------MQSLLNPFWEKVIIGILVLIVVLI 307


>gi|55378709|ref|YP_136559.1| branched-chain amino acid ABC transporter permease [Haloarcula
           marismortui ATCC 43049]
 gi|55231434|gb|AAV46853.1| branched-chain amino acid ABC transporter permease protein
           [Haloarcula marismortui ATCC 43049]
          Length = 295

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 81/288 (28%), Gaps = 9/288 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I    +   +Y + A G ++V G  G+L+L        GAY+Y+ L S         I  
Sbjct: 9   IVDGALISAVYALIAIGFTMVFGVGGVLNLAHGALIMAGAYTYLSLVSD-------SILA 61

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S  +       + +  +      L +  +   E    I      +        V    + 
Sbjct: 62  SVTLHPIVAFPLTIVVVGLISYGLYVVLVRTIEENVVITFLATIVVAIAFTELVTLVFHA 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +    +  +             +        +  ++ +T    + R    +++
Sbjct: 122 QPYQYSVVPGVLQVQALGTRILYVELAAFVVSWVAMGLLWYYVTKTDSGRSIRATSMSER 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   +   +   + V+    G+AG F        +          +   IV++GG+
Sbjct: 182 GAMLTGVDVSGVRARTWLVAGGLAGIAGVFLGG--IGAAEPTMWLEPLALAFIIVVVGGI 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            S+     A  I+  +              ++       +       +
Sbjct: 240 GSIKGSVAAAYIVGYLQTATGQFLGQSVRGIMSLVVLVVVLLVLPQGL 287


>gi|296270843|ref|YP_003653475.1| inner-membrane translocator [Thermobispora bispora DSM 43833]
 gi|296093630|gb|ADG89582.1| inner-membrane translocator [Thermobispora bispora DSM 43833]
          Length = 348

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 84/317 (26%), Gaps = 37/317 (11%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             +   + S+        +   G++ V+   G + L+     A+ A  +    +      
Sbjct: 64  FATTSNLVSILALASTIGVITVGMTFVI-IGGGIDLSVGAIMAL-ASVWATTLATQSYGP 121

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            ++   + ++    G++ G      R      ATL      + +  +             
Sbjct: 122 LVMAMCAILVGTGAGLVNGFLVAYGRMAPFI-ATLATLVAARGLAQRISD---------- 170

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                    T                  + +  ++     +     L L RT        
Sbjct: 171 -------RKTQLIRPENQAIVELSTTRVLGLPLLVYIFAAVVLVGWLVLSRTTFGRRTYA 223

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +  N +A       +    +  +A+S    G+A     A     S       E   + ++
Sbjct: 224 VGGNPEAARLAGIDVRRHTMLLYALSGLCCGIAAILIMARTTTGSSTHGDLYELDAIAAV 283

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +I      GG  ++        +   +  L               +            + 
Sbjct: 284 IIGGTLLSGGRGTIIGSILGLMVFTVITNLFI------------LNGLDTSDQLIAKGLI 331

Query: 328 LFLVILMRSHSLLRLRT 344
           + + +L +  +L   RT
Sbjct: 332 IVVAVLFQRRALTAART 348


>gi|157144386|ref|YP_001451705.1| ribose ABC transporter permease protein [Citrobacter koseri ATCC
           BAA-895]
 gi|157081591|gb|ABV11269.1| hypothetical protein CKO_00090 [Citrobacter koseri ATCC BAA-895]
          Length = 321

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 91/312 (29%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTMSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                   Q 
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        +     ++G+ FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPVNTGFTDNADLFGWFGIGRPLGVPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGISVSKVKIIVYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|77463485|ref|YP_352989.1| branched chain amino acid ABC transporter inner membrane protein
           [Rhodobacter sphaeroides 2.4.1]
 gi|77387903|gb|ABA79088.1| ABC branched-chain amino acid transporter family, inner membrane
           subunit [Rhodobacter sphaeroides 2.4.1]
          Length = 431

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 53/315 (16%), Positives = 107/315 (33%), Gaps = 22/315 (6%)

Query: 50  VMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMI 109
            + A  +        +         AI    Y       GL + L  P   +++      
Sbjct: 118 ALLAVLIGGFFAYRAIFDPAVAAIEAINPALYG-NIGGLGLPVLLAWPAGGLLAALAAWA 176

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           +G  +L  R DYLAIATL ++EI   ++     +  G   +    R       ++    F
Sbjct: 177 IGKTALGLRSDYLAIATLGIAEIIIAVMKNEDWLARGVKNMISLPRPVPYEVDLQQSAGF 236

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWL---------RRTAISNAWRTIRDNQKAF 220
             +   +    +    +++ +C+ +  + +            R+      R IRDN+ A 
Sbjct: 237 VAWAQGWGYDPVTASAIVVKLCYAALFVAVLAIIVTLSELALRSPWGRMMRAIRDNEVAA 296

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS-ENIIVISIVILGGMT 279
            ++   +    L  F + +A IG+AGA       +++P  +       +V  +VI+GG  
Sbjct: 297 EAMGKDVTRRHLQIFVLGAAVIGIAGAMMTTLDSQLTPGTYNPLRFTFLVWVMVIVGGSG 356

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR-----------HTTLMVIAL 328
           S         ++  +  +   +      ++       +                 M + L
Sbjct: 357 SNWGAVLGGFLIWWLWVMVEPIGLSLLGAITAGMADGSWLKAHLQDSAAHMRLLTMGLIL 416

Query: 329 FLVILMRSHSLLRLR 343
            LV+      L+  R
Sbjct: 417 LLVLRFSPRGLIPGR 431



 Score = 36.4 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 27/69 (39%)

Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
          G  +S      +    LI  + A G+++  G  GL ++  +   A+G  + V+  ++   
Sbjct: 19 GVLQSWNSALGILNMALISAIMALGVNMQWGYAGLFNVGVMGFVALGGLAVVVTAAQPVP 78

Query: 91 SIWLLIPVS 99
            +      
Sbjct: 79 GAFSAGGWG 87


>gi|312197237|ref|YP_004017298.1| inner-membrane translocator [Frankia sp. EuI1c]
 gi|311228573|gb|ADP81428.1| inner-membrane translocator [Frankia sp. EuI1c]
          Length = 966

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 104/297 (35%), Gaps = 4/297 (1%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LR   + +      ++   LL + L    +Q     +   IL Y +    ++++ G  G 
Sbjct: 311 LRGTWWVRYAERTPLLLFGLLAVILPLLVTQPSRQLLYTVILGYAICGASVTVLTGWAGQ 370

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           LSL  +    IGA          G  +       ++ +      + + +L        + 
Sbjct: 371 LSLGQMAFAGIGALVAA--ALDRGTQLTFGSTTVSLNALPFPAAVAIAALVAAVVAGVVG 428

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
              +      + +                          +           V  +   YY
Sbjct: 429 VGALRVRGLLLAVSTFAFAVAADQYLYRLSFLHDTDATTATFPRTTVFGIDVSGQRAYYY 488

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++L +  +  +++  LRR+ +      +RDN     +        KL AFA++    G+ 
Sbjct: 489 LVLIVTVVVLAVVARLRRSGVGRTTIGVRDNPATAAAYTVNATRVKLRAFALAGGIAGVG 548

Query: 246 GAFFAASRDRISPDMFKFS--ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           GA  AA+   +      F   ++++++S+V++GG+ S++        +IG+     G
Sbjct: 549 GALLAAAGQSVPYADKYFLSADSLVIVSVVVIGGLGSVTGPVLGALWVIGLPSFFPG 605



 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 87/263 (33%), Gaps = 9/263 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
                +  L+  + A G+ +V  S  +++        IG+  + +L  R+ +  W+ + +
Sbjct: 9   WFDGLVTGLVIGLLAVGIVLVHRSTRVINFAVANMGLIGSVLFALLVVRWHVPYWIGLVI 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I    G I+    ++       +  L+ +     +               +      
Sbjct: 69  ALVIGAVFGAIVDGVVIRRLFSAPRVIVLVATVGVAQLAQTIVL--------ALPKMDDN 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +  +          P   +        V++ +  ++ ++ L+L RTA+  A     DN +
Sbjct: 121 VTDSYPVPWGGTWSPVHGLRITGAALSVVVAVPLVALALGLFLSRTALGKAVAASADNPE 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII-VISIVILGG 277
                  +      + +A +     +     +A    ++         ++  ++  ++  
Sbjct: 181 LARLQGISPKAVSTAVWAAAGLIGTLCLILISAQNQSLTQLTTLGPTTLLRALAAAVIAR 240

Query: 278 MTSLSKIAKATAILIGVVELCCG 300
           MTSL     A   L  +  +   
Sbjct: 241 MTSLRAALAAGVFLGLLQTVIQF 263


>gi|238787881|ref|ZP_04631678.1| Ribose transport system permease protein rbsC [Yersinia
           frederiksenii ATCC 33641]
 gi|238724224|gb|EEQ15867.1| Ribose transport system permease protein rbsC [Yersinia
           frederiksenii ATCC 33641]
          Length = 306

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 90/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 7   LIALLVLIAVVSSLSPNFFTLNNMFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 65

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +   G+   + +                + F  
Sbjct: 66  LTGAVAASIVGLEVNALVAVGAALALGAFVGGITGVIVAK------------GKVQAFIA 113

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    T V     +F      +   + +   +  M  +  
Sbjct: 114 TLVMMLLLRGVTMVYTNGSPVNTGFTDVADTFGWFG-----IGRPLGVPTPIWLMAIVFI 168

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T +      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 169 AAWYMLHHTRLGRYIYALGGNESATRLSGISVDKVKIIVYSLCGLLAALAGIIEVARLSS 228

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 229 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 288

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 289 VKAVVILLAVLV 300


>gi|256393633|ref|YP_003115197.1| Monosaccharide-transporting ATPase [Catenulispora acidiphila DSM
           44928]
 gi|256359859|gb|ACU73356.1| Monosaccharide-transporting ATPase [Catenulispora acidiphila DSM
           44928]
          Length = 377

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/324 (12%), Positives = 92/324 (28%), Gaps = 16/324 (4%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSM-----GIQILIYVMFAWGLSIVVGSLG 64
           +   +  LL  +   ++F    +T    ++          Q   + + A  + +++   G
Sbjct: 45  RRPALGALLGAIAVFVVFTITDSTPQHLWLTQTGFEAWAQQAAFFGIMAVPVGLLM-IGG 103

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
              L+        A    +L      + W  + V+       G + GL   +       +
Sbjct: 104 EFDLSTGGMTGFCAIIMALLVGNEHWNAWAAVAVTFAFGALIGAVNGLVVTRSGLPSFIV 163

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
                       +     + +G   I +            +   F    +          
Sbjct: 164 TLATYFVFRGLSVGGVLKVNHGSTNIGLTG--THHPGLKSAKDVFGGSFAHSTGLPAGYQ 221

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +L    ++ + +  L RT   N    +  +  A   +   +   K+  F  +S+   +
Sbjct: 222 TAILWFVGVTVAAVWLLGRTRFGNWVFAVGGDADAARKVGVPVRRTKVLLFVGTSSAAAL 281

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
            G       +    +     E   +I+ V+      GG  S    A    I+        
Sbjct: 282 VGVISFLQSNTAVSEQGVGYEFYYIIAAVVGGCLLTGGHGSAIGAALGACIIGM---ALQ 338

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTL 323
           G+ +  ++S   F     +    +
Sbjct: 339 GVIYSGWDSSWDFTFLGAILFLAV 362


>gi|227821229|ref|YP_002825199.1| hypothetical ABC transporter permease protein [Sinorhizobium fredii
           NGR234]
 gi|227340228|gb|ACP24446.1| hypothetical ABC transporter permease protein [Sinorhizobium fredii
           NGR234]
          Length = 328

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 87/311 (27%), Gaps = 27/311 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L+ +   +L         +     ++  Q  I  + A G++ V+     + L+     
Sbjct: 31  IILVFLAICVLFTSLNQYFLTWNNWLNLLRQSSINGILAIGVTFVI-LTKGIDLSVGSVM 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       L +     + +   ++A+ +GA   +     +        +ATL M  + +
Sbjct: 90  ALAGMMAANLVTTGNEHLVIWSILAALGTGAVVGLANGVLIARINVPPFVATLGMLSMAR 149

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                                          + +   +L    + 
Sbjct: 150 GLTL-------------------IYSDGRPIANLTASLRWIGSGNVLGLPVPVLIFFAVF 190

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L RT        +  N+KA  +   +      + + +     G+AG    A   
Sbjct: 191 LIGWLTLSRTTFGRYVYAVGGNEKAARTSGISTRTIIAATYVICGLLAGLAGLVLTART- 249

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
             +         +  I+ V++      GG  SL        I+  +      M    +  
Sbjct: 250 TAALPQAGIGYELDAIAAVVIGGTSLSGGRGSLVGTLFGALIIGTINNGMDLMGVSSYYQ 309

Query: 309 LLKFDCSFNMR 319
            L       + 
Sbjct: 310 QLLKGAIIVLA 320


>gi|168070084|ref|XP_001786687.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162660711|gb|EDQ48499.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 304

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 14/200 (7%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR- 87
              A  +  +I  +GIQI IY   A GL++VVG  GLL L     +A+GAY++ I GS  
Sbjct: 102 VPLAGFANTFIFELGIQIGIYAAMALGLNVVVGMAGLLDLGYAAFFAVGAYTWAIFGSEQ 161

Query: 88  -----------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                       G  ++L + ++ + +   G+++GLP+L+ RGDYLAI TL + E+ + +
Sbjct: 162 AKNFMQGNFPLPGEYMYLFMGIAIVTTAITGLLIGLPALRLRGDYLAIVTLGLGEVVRIL 221

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIR--FFRFPSSFVIYEIFMYYVLLGMCFLS 194
                   N   G      +          +             Y++F Y+++L M  L 
Sbjct: 222 ANNLDQPINFTNGPQGITPVQRPPIDWFRQLMATLGVHLDRTTDYQLFFYFLVLLMIGLV 281

Query: 195 ASIILWLRRTAISNAWRTIR 214
             + + L  +    AW  IR
Sbjct: 282 VLVNVNLANSRFGRAWVAIR 301


>gi|71084036|ref|YP_266756.1| branched chain amino acid ABC transporter permease [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|91762896|ref|ZP_01264861.1| Branched-chain amino acid transport system/permease component
           [Candidatus Pelagibacter ubique HTCC1002]
 gi|71063149|gb|AAZ22152.1| Branched-chain amino acid transport system/permease component
           [Candidatus Pelagibacter ubique HTCC1062]
 gi|91718698|gb|EAS85348.1| Branched-chain amino acid transport system/permease component
           [Candidatus Pelagibacter ubique HTCC1002]
          Length = 443

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 62/184 (33%), Gaps = 12/184 (6%)

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
              S V  ++    + L +      +      +      R IRDN++A  ++   ++   
Sbjct: 256 IEGSSVFVKLCYSGLFLIVVIALLIVTQKALYSPWGRMMRAIRDNEEAANAMGKNVVKQH 315

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS-ENIIVISIVILGGMTSLSKIAKATAI 290
           L  F + SA +G+AGA         +P  ++      ++  +VI+GG  +          
Sbjct: 316 LLIFILGSAIVGIAGAMLVTQDGLFTPGSYQPMRYTFLIWVMVIVGGSGNNFGAILGGFA 375

Query: 291 LIGVVELCCGMNFYYFNSLLK-----------FDCSFNMRHTTLMVIALFLVILMRSHSL 339
           +  +      +  +  N                  S       +M + L L++  R   +
Sbjct: 376 VWFLWIEAAPIALFLINLFTAGLADTHSLKIHLIESVPYFRYLMMGMGLLLIMRYRPKGI 435

Query: 340 LRLR 343
           L  +
Sbjct: 436 LPEK 439



 Score = 39.1 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 37/94 (39%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           L L + +G  +S     S+    LI  +   G +I  G  GL++   +   A+G  + V+
Sbjct: 2   LGLIILVGIFQSWNVALSIFNMCLISAVMTMGANIQWGYAGLINFGLMGYAALGGLAAVL 61

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           +        W+    S ++S    + M L     
Sbjct: 62  ISVEPVQEAWVAGGFSILMSLWLIVAMVLAIRFV 95


>gi|297559025|ref|YP_003677999.1| inner-membrane translocator [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296843473|gb|ADH65493.1| inner-membrane translocator [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 299

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 87/284 (30%), Gaps = 6/284 (2%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                +Y + A GLS++ G + +L+       A+GAY           +          +
Sbjct: 12  LGLGALYFLIASGLSLIFGLMDVLNFAHGAFLALGAYGTWWAAGHLPGAGTDGFGFLLAV 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +   G      +L             +    +  ++    ++     +  A       T 
Sbjct: 72  AFGVGAGTLAATLV-----ELCVIRPLYGRHREQILATVGLSLAVPALIQAVWGADPLTF 126

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
            +  +         V      + ++L    + A++ L+  RT      R    ++    +
Sbjct: 127 PKPELVSGTAAVLGVNIPRDRFLLILAAAAVFAALWLFNSRTRYGLVVRAGVQDRAMVTA 186

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   +  +    FA+  A   +AGA        ++P     S  +    +V++GG  SL+
Sbjct: 187 LGIDVRRSFTLVFAIGGAAAALAGALGGLYFGVVTPTQ-GMSLLVFAFIVVVIGGTASLT 245

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             A A   +  + +            +        +  T    +
Sbjct: 246 GCAIAAVAVGLIQQFANYYTVAGLGDIAVVIVLALVLLTRQGGL 289


>gi|297564665|ref|YP_003683637.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
 gi|296849114|gb|ADH62129.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
          Length = 326

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 97/320 (30%), Gaps = 26/320 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGA-TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           RL     +   +A+   ++ F        S      +  Q+++  + A G ++V+   G 
Sbjct: 15  RLPSLTVLGPFIALALAIIFFGIQSDRFLSGPNFSLILQQVMVVGVLAIGQTLVI-LTGG 73

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+G           GL   L +      + A G++ GL   + +     + 
Sbjct: 74  IDLSVGFVMALGTMVMTKFAVELGLPSLLAVLCGIAATTAFGLLNGLLITRIKLPPFIVT 133

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
              M+  F    I                      T          + ++F +    + Y
Sbjct: 134 LGTMNIAFALTQIY-----------------SKAQTVTGLPDPLLFWGNTFKVGGTVITY 176

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            +  M  L   +  +L  TA       + +N +A   +        L  + ++  F G+A
Sbjct: 177 GVALMIVLYLLVWFFLSETAPGRHLYAVGNNPEAARLMGIPTQRVLLLTYTIAGFFYGLA 236

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCC 299
           G    +    +       +EN+  I+ V+L      GG   +        I+        
Sbjct: 237 GWLLVSRT-SVGDPNAGQTENLETITAVVLGGTSLFGGRGMVLGTLLGAIIVGVFRNGLT 295

Query: 300 GMNFYYFNSLLKFDCSFNMR 319
                    +L       + 
Sbjct: 296 LTGISSVYQVLITGILVILA 315


>gi|119509432|ref|ZP_01628580.1| permease protein of ABC transporter [Nodularia spumigena CCY9414]
 gi|119465838|gb|EAW46727.1| permease protein of ABC transporter [Nodularia spumigena CCY9414]
          Length = 378

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 57/158 (36%), Gaps = 2/158 (1%)

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
                +  L R+      + IR++++   +L   + + K+ +  +  A  G+AGAFFA  
Sbjct: 223 FIFWRLEILVRSPWGRVLKAIREDEEVPKALGKNVFWYKVQSLMLGGAIAGIAGAFFAWQ 282

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              I PD F+         +VILGG  +         I               F +L   
Sbjct: 283 LSAIYPDNFQPQLTFDAWIMVILGGSGNNIGTILGAVIFFTYDAATREFLPKIFTNLSS- 341

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                     ++ + L ++++ R   +L  +      +
Sbjct: 342 -DQLGAFRIMVIGLILMILMVWRPQGILGKKEELTLGK 378



 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 69/153 (45%), Gaps = 6/153 (3%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y+  +     I+ +FA GL++  G  GL++   +    +GAY+ V+L  +  + +++   
Sbjct: 4   YLIFLATSTTIFALFALGLNLQWGYTGLINFGHIAFMTLGAYTTVLLSFQG-VPLFVSAV 62

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW-----KPITNGKAGIYV 152
           + A+++   G+I+G  +L+ R DYL+I T+ + E+ + ++            +G  G+  
Sbjct: 63  MGAIVAAFLGLIIGFATLRLREDYLSIVTIGVGELIRLVVNNQELPVKDSWISGTFGVQS 122

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                     +   +      +   I  +F  +
Sbjct: 123 YPIPLSTTPNLFVRVGMMGLLTLLAILTLFGLW 155


>gi|114707825|ref|ZP_01440719.1| inner-membrane translocator [Fulvimarina pelagi HTCC2506]
 gi|114536814|gb|EAU39944.1| inner-membrane translocator [Fulvimarina pelagi HTCC2506]
          Length = 294

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 48/315 (15%), Positives = 110/315 (34%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           FL +        +    I    Y + + GL+++ G L +++      Y +GA+   +L  
Sbjct: 3   FLGVPFPVFAGQLLIGLINGAFYAVLSLGLALIFGLLNIVNFAHGALYMVGAFVAFLLLD 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+  W  + +S +I G  GM++    L+   D   +  L+++     ++  +     G
Sbjct: 63  ILGIGYWPALLLSPIIVGLFGMVIERFLLRPIADLDHLYGLLLTFGLALLIEGFFRQMYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G   A             I    F   F+    +  +V++    +  +    + +T +
Sbjct: 123 VSGETYAIP----------SILQGGFNLGFMFLPTYRAWVIVAAIIVCGATWFLIEQTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N     +    +       + +  A    AG   A         +   +  
Sbjct: 173 GATMRAAVENADLVRAFGVNVPLLVTLTYGLGVALAAFAGVLAAPIYSV--NPLMGSNII 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V +IV++GG+ S+     +  +L     L                  +      ++ +
Sbjct: 231 IVVFAIVVIGGLGSIKGAIISGFLLGLCEGLTRVY--------------YPEASNIVIFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + +V+++R   L  
Sbjct: 277 VMAIVLVVRPAGLFG 291


>gi|260467512|ref|ZP_05813680.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259028739|gb|EEW30047.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 291

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 105/305 (34%), Gaps = 26/305 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
             Q  +Y M A GL++V  ++G+ + +  +   +GAY    L      +         ++
Sbjct: 12  LFQGSLYAMMAVGLALVWTTIGVFNFSHGVFMMLGAYIAWQLVELGLPAAVAFPIAVVVM 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +G   ++                   +      +++    +  G      A  ++   + 
Sbjct: 72  AGVGWILQASVVRPL-----------IGRPNIVLVVVITTLAAGSLIENGALTIWGPRSK 120

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +         V   +    +++    + A++ ++L R  +  A R +  N+ A   
Sbjct: 121 QIPALIDGNATIGGVGVSLHQIAIIVITPLILAALWMFLNRMRLGLALRAVAQNEDASHL 180

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +      AFA++++  G+AG F    R      +      +  + +V+ GG++S+S
Sbjct: 181 VGLNVTALYGLAFAIAASLAGLAGIFMGGYRFM--SPVMGSDPLLKALIVVVFGGISSIS 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A  ++      C      Y+   L F               L L +++R   +   
Sbjct: 239 GPIFAAYLIGFFEAACSYYFGLYWTPALLFG-------------VLILTLMVRPEGIFAS 285

Query: 343 RTPSN 347
           R+   
Sbjct: 286 RSRGL 290


>gi|295093933|emb|CBK83024.1| monosaccharide ABC transporter membrane protein, CUT2 family (TC
           3.A.1.2.-) [Coprococcus sp. ART55/1]
          Length = 339

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 95/313 (30%), Gaps = 25/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ ++  + + L      +   I S+  QI I    A G+++++  LG + L+     
Sbjct: 29  IIVVLIIMCVAVALATDKFLTTNNIISVLRQISINTYIALGMTLII-ILGHIDLSVGSIV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+     V      GL + + I    ++  A G I G     F+     I          
Sbjct: 88  AMSGTLTVGFIVNQGLPLGVAIVAGLLVGTAAGFISGFIVANFKVPAFIITM-------- 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                   + N  +GI               +         F +  + + Y+++ +   S
Sbjct: 140 -------AMMNIASGIAYVYTGGQSTRITNKIFIEIGTGYLFNVIPLPVVYMVVLIILFS 192

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +     +T        I  N++A       I   ++  F +S      AG    +   
Sbjct: 193 FIL----SKTKFGTYVYAIGGNREAARLSGVPIKKIEIIVFTISGLLSAFAGLVLCSRMY 248

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P +    E   + + V     + GG   +S       ++  +      +    +  L
Sbjct: 249 SGQPSVGSGYELDAIAACVLGGTSMTGGKGRISGTVFGAMVIGIISNGLNLIGVSSYWQL 308

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 309 IIKGLIIACAVLL 321


>gi|241113651|ref|YP_002973486.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240861859|gb|ACS59525.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 350

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/313 (9%), Positives = 86/313 (27%), Gaps = 10/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +V   +         +      M   + I+ + A G+ ++V   G + L+     
Sbjct: 31  AFFALIVIIAVFSFLSPYYFTLNNFLIMASHVAIFGILAIGM-LLVILNGGIDLSVGSTL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       L     L+ + +I    + +                  +    +   ++  
Sbjct: 90  GLAGCIAGFLMHGVTLTYFGVILYPPVWAVVVITCALGAL----VGAVNGVLIAYLKVPA 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +             + + + L +     R  +    F          +   ++ +  L+
Sbjct: 146 FVASLGVLYVARGIALLMTNGLTYNNLGGRPELGNTGFDWLGFNRLAGIPIGVIVLAVLA 205

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L RTA          N++A       +   K+  + +S     +AG   ++   
Sbjct: 206 IICGIVLSRTAFGRWLYASGGNERAADLSGVPVKRVKIIVYVLSGVCAAIAGLVLSSQLT 265

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG  ++        ++  + +    +    +   
Sbjct: 266 SAGPTAGTTYELTAIAAVVIGGAALTGGRGTVRGTMLGAFVIGFLSDGLVIIGVSAYWQT 325

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 326 VFTGAVIVLAVLM 338


>gi|83718581|ref|YP_443168.1| branched-chain amino acid ABC transporter permease [Burkholderia
           thailandensis E264]
 gi|167620339|ref|ZP_02388970.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis Bt4]
 gi|257139398|ref|ZP_05587660.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis E264]
 gi|83652406|gb|ABC36469.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia thailandensis E264]
          Length = 311

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 106/315 (33%), Gaps = 22/315 (6%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
            + +     L+  M   GL+++ G LG+L+      Y +GAY           S W+ + 
Sbjct: 7   NLLNGLSYGLLLFMLCAGLTLIFGMLGVLNFAHASFYMLGAY--AGCAIAARTSFWVALV 64

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            + +  GA G +     L+       +  L+++     ++ +   +  G         L 
Sbjct: 65  AAPLAVGAFGALCERTLLRRVRSGGHLDELLLTFGLAYLIGEGVKLVWG---------LA 115

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L   V +++    F     ++  +  ++      +  ++   LR +      R    ++
Sbjct: 116 PLTAPVPAVLDGAAFTVYGAVFPRYRVFMTSVSFAMLGALWAVLRVSQTGLVVRAALTHR 175

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A  +L   +       FA  +A   +AG   A     +       +   +V +++++GG
Sbjct: 176 AAVEALGHDVPRVMTLVFAAGTALAALAGVIGAPLA--VIEPAMAQTLGSVVFAVIVIGG 233

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT---------TLMVIAL 328
           + SL+    A+  +               ++      +                +  + L
Sbjct: 234 LGSLAGALVASLAVGCAQTFATASRASLGDAAQWAGIALPDAWRALTLAQLAPLIPYLLL 293

Query: 329 FLVILMRSHSLLRLR 343
             V+  R+  L   R
Sbjct: 294 VAVLACRARGLFGER 308


>gi|114047482|ref|YP_738032.1| inner-membrane translocator [Shewanella sp. MR-7]
 gi|113888924|gb|ABI42975.1| inner-membrane translocator [Shewanella sp. MR-7]
          Length = 405

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 91/296 (30%), Gaps = 27/296 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +  +  +     + + G+S+V+   G + L+     AI       L     +S+  +I  
Sbjct: 97  LIDILNRSAPVALLSIGMSLVIA-TGGIDLSVGAVMAIAGAVCANLLLVPDISLVTVIAA 155

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++    G I G          +    L+M                  AG  VA  +  
Sbjct: 156 GLIVGLLAGCINGGLVSFLGIQPIVATLLLM-----------------VAGRGVAQLINQ 198

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                     F        +      ++++GM   S  ++   R+TA+      +  N K
Sbjct: 199 GQIITFQHPGFAAIGVGQFLGLPMPVWIVIGMLTFSQLLL---RKTALGLFIEAVGCNAK 255

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L       KL A+ ++     +AG    A       +       +  +  V++GG 
Sbjct: 256 ASRYLGINDKSIKLFAYGIAGLCAALAGMISTADIQGSDANNAGLWLELDAVLAVVIGG- 314

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
                 A        ++ +   +      + +         +  +  I +  V+L+
Sbjct: 315 -----AALTGGRFSLILSVVGALIIQTLATTIIVSGLPAKFNLLIKAIVILTVLLL 365


>gi|254712451|ref|ZP_05174262.1| hypothetical protein BcetM6_03531 [Brucella ceti M644/93/1]
 gi|254715524|ref|ZP_05177335.1| hypothetical protein BcetM_03562 [Brucella ceti M13/05/1]
 gi|261217260|ref|ZP_05931541.1| inner-membrane translocator [Brucella ceti M13/05/1]
 gi|261320131|ref|ZP_05959328.1| inner-membrane translocator [Brucella ceti M644/93/1]
 gi|260922349|gb|EEX88917.1| inner-membrane translocator [Brucella ceti M13/05/1]
 gi|261292821|gb|EEX96317.1| inner-membrane translocator [Brucella ceti M644/93/1]
          Length = 289

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 86/303 (28%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y       + GL+    I ++
Sbjct: 9   VDALAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMIGGYFASYAAQQLGLNYGFAIIIA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + +    + +     +       +  ++M+      +I       G            L
Sbjct: 69  IVGTMIIAVPVERLLYRRIYGAPELTQVLMTIGVTFCIIGITNYIFGP----------TL 118

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T     +        F        + +     ++  +   + RTA     R   DN   
Sbjct: 119 KTIPLPEMLRGSVDLGFRAIAKHRIFAIGCGLAVAVGLWYAVERTAFGVKLRAAVDNANM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FA++       G   A          +     +  + +V +GG  
Sbjct: 179 AAALGVRTEIVYAVSFALAIGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L  +      +                        +A+ +++ +    L
Sbjct: 237 SIPGALVACLLLGAIDTTGRYLA--------------PEYGEFFFYLAVIVIVTLFPRGL 282

Query: 340 LRL 342
              
Sbjct: 283 AGR 285


>gi|220920378|ref|YP_002495679.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219944984|gb|ACL55376.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 293

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 97/288 (33%), Gaps = 9/288 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    Y +FA G +++ G +G+++L   + +AIGA++ +       L I   +PV
Sbjct: 6   LVNGVVLGATYALFAIGFTLMFGVMGVINLTYGVYFAIGAFAALWSTQSLNLGIAAALPV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+++G   + +    L       A     +       L  +  +         A     
Sbjct: 66  GALVAGLIAVAIDTALLTRLRKAKAPELASLMVTLGATLFLYAGL--------AAWLGTE 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +     ++     +    +        ++        +++  +R + +  A R + +N  
Sbjct: 118 IRRFPAAIFEGGAYSLGSIRIGTTQILIVGAAIAFVIALMALVRGSRLGLAIRAVAENPD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +             +S A  G AG     + + I P M      +   +++I+GG+
Sbjct: 178 AAALMGINGGLMLRVVSFLSGAIGGAAGVLVGLNFNAIQPFM-GEHMMLRGFAVIIVGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             L     A  +L     L        F  L  F           M +
Sbjct: 237 GDLRGALVAGLLLGFAEVLTAAYLSSTFKDLTAFALLVATLWFRPMGL 284


>gi|111220938|ref|YP_711732.1| branched chain amino acid ABC transporter permease [Frankia alni
           ACN14a]
 gi|111148470|emb|CAJ60141.1| Putative permease component of branched-chain amino acid transport
           system [Frankia alni ACN14a]
          Length = 763

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 51/312 (16%), Positives = 98/312 (31%), Gaps = 20/312 (6%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           + D +  L      L    F  +     ++           +    + IV G  G LSL 
Sbjct: 324 RRDYLGKLGGTALLLAPLTFAPSDLRSAFMVPAL------ALIFLSMVIVTGYSGQLSLG 377

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +GA    +L  +        +P    I+      + +  +     Y AI    +
Sbjct: 378 SAGFAGLGA----LLSLKLANGDLFGLPAIPGIASMFVGALFVAPIGLITGYPAIRRRGL 433

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +       +          G  V+  ++   T    L         + + E   Y   L 
Sbjct: 434 TLALTTFAV----------GAVVSRFVFEQPTFATGLYLDPLSLFGWELSEKAFYVFELI 483

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              +   ++  L    +  A   +RD+ +   ++   +   KL AF VSS   G+ G   
Sbjct: 484 CLGIGLLVVRNLHHGRLGRALLALRDHSEGAAAVGVDVRNLKLLAFTVSSVVAGLGGTLL 543

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             S    S D F   ++++  + VI+ G  S +    A A ++ +  L    +      +
Sbjct: 544 VHSSYSFSADDFAPLQSLLWFTAVIVFGADSAAGAIVAAAFMVTIDVLAPAGSSTLAIGI 603

Query: 310 LKFDCSFNMRHT 321
           L     +     
Sbjct: 604 LALALGWMPGGL 615



 Score = 47.2 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/280 (12%), Positives = 81/280 (28%), Gaps = 8/280 (2%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      I  +   GL +   + G+L+L       + AY +  +   + L IWL   V+
Sbjct: 8   LAGLSLGAIAALSGIGLLVTYRTNGVLNLAQGGIATLVAYVFREMVVEWDLPIWLAAVVA 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             +       +GL   +     LA      +E     L          AGI+        
Sbjct: 68  LAVVSPG---IGLLLERLVFRPLARRRASAAESLVASLGVLVLSLGITAGIWGLGARSDA 124

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            +   +        S   +  +    +++    +   I     RTA     R + D+++ 
Sbjct: 125 PSIFPNSSVRLFGDSRVGVDALAELIMVVVFAAVIGIIAA---RTAFGRQIRAVVDDRQL 181

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                        + +A  +   G+ G   A         +      +   ++V+   ++
Sbjct: 182 AELSGVPADKVAAAGWAAGTTMAGLTGILLAPRFQLTPYGLT--LLVLETFAVVVAARLS 239

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           S+         +  +         +     +      N+ 
Sbjct: 240 SMPVAVLTALGIAILQSELKQFTLHGDAGQILTVLQSNLF 279


>gi|84495196|ref|ZP_00994315.1| putative ABC transporter integral membrane protein [Janibacter sp.
           HTCC2649]
 gi|84384689|gb|EAQ00569.1| putative ABC transporter integral membrane protein [Janibacter sp.
           HTCC2649]
          Length = 351

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 96/322 (29%), Gaps = 29/322 (9%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +   ++   AV++ + +        S   I ++     +  + + G++ V+ S G + L
Sbjct: 40  TRNLGLVIAFAVLFIVGVATGGDRFASFDNILTILRFASVIGVVSIGMTFVI-SGGGIDL 98

Query: 69  NCVIAYAIG---AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           +     A+    A +             +++  + ++  ACG++ GL     +      A
Sbjct: 99  SVGAIVALSSVWATTLATQTMAENTHWIVMVGTALLVGAACGLVNGLLIAYGKVAAFI-A 157

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL M    + +                      +      +IR   F   F    + +  
Sbjct: 158 TLAMLAGARGLA-------------------EIIAQRKTQIIRDRGFIDFFGGSVLGIPV 198

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +++    ++ +  + L RT        I  N +A       +       + +     G+A
Sbjct: 199 LVIIFAAVAVAGWILLNRTTFGRRTLAIGGNPEAARLAGIKVQRQTAYLYVLLGLACGLA 258

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
                A     +    +  E   + ++VI      GG  ++        I   +  +   
Sbjct: 259 AVMLMARTTTGTSTHGQLLELDSIAAVVIGGTLLSGGRGTIVGTVLGVLIFATLTNVFTL 318

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
            N       +            
Sbjct: 319 NNLDTSTQAVAKGVIIVAAVLL 340


>gi|255291854|dbj|BAH90349.1| branched-chain amino acid ABC transporter, permease protein
           [uncultured bacterium]
 gi|255292655|dbj|BAH89764.1| branched-chain amino acid ABC transporter, permease protein
           [uncultured bacterium]
 gi|255292842|dbj|BAH89943.1| branched-chain amino acid ABC transporter, permease protein
           [uncultured bacterium]
          Length = 286

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 90/303 (29%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I    +   +Y +FA GLS++ G +  +++         AY  V   + + +   L I  
Sbjct: 7   IVQGVLLGGLYALFAAGLSLMFGVMRFINMAHGDFIVTAAYMIVAFIAGWSIHPALAIVA 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              + GA G +     L        +  ++++     I+              +      
Sbjct: 67  VLAVLGAAGYLNQRLLLNRVLGKDILPPVLVTFGMSIIIQNALLEIFSADNQRLQAGWLD 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +   S           +   +    + +    +   +     RT+I    R   D+ +
Sbjct: 127 TNSIRLSED---------ISIGLLPLLMFVAAVVVIGGLQFIFYRTSIGRLLRATSDDPE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +  +       A  ++S  + +AG F A   +         +  +     VI+GG+
Sbjct: 178 IVPLMGGSNAHIFAIATGIASVVVAIAGIFLAMKTNF--DPAAGPARLLFAFEAVIIGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        IL     L   ++                       +    ++++R   
Sbjct: 236 GSLWGTLAGGIILGVAQTLGAQID--------------AGYQILAGHLVFLALLVVRPRG 281

Query: 339 LLR 341
           L  
Sbjct: 282 LFP 284


>gi|108799257|ref|YP_639454.1| inner-membrane translocator [Mycobacterium sp. MCS]
 gi|119868373|ref|YP_938325.1| inner-membrane translocator [Mycobacterium sp. KMS]
 gi|126434915|ref|YP_001070606.1| inner-membrane translocator [Mycobacterium sp. JLS]
 gi|108769676|gb|ABG08398.1| urea ABC transporter membrane protein [Mycobacterium sp. MCS]
 gi|119694462|gb|ABL91535.1| urea ABC transporter membrane protein [Mycobacterium sp. KMS]
 gi|126234715|gb|ABN98115.1| urea ABC transporter membrane protein [Mycobacterium sp. JLS]
          Length = 294

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 88/291 (30%), Gaps = 27/291 (9%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI--WLLIPVSAMISGACGMIMGLPSLK 116
             G +G++++        G Y+  ++   +  +    L+  V     G     +   +L 
Sbjct: 28  TFGQMGVINMAHGEFIMAGCYTAYVVQQVFSSAGASLLISLVVGFFVGGAMGALLEVTLI 87

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
            R  +  + TL+++     IL +      G   + V    +  G                
Sbjct: 88  QRMYHRPLDTLLVTFGVGLILQQIARDIFGAPAVNVVAPSWLSG----------GVEILG 137

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
            +      ++L+      A +   L+ + +    R +  N+    +   +     ++ F 
Sbjct: 138 AVVPKTRIFILVLAVVCVAVLATVLKTSPMGRRIRAVVQNRDLAETSGISSRKTDITTFF 197

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           + S    +AG   A +    +      S  I    +V++GG+  +     A   L  +  
Sbjct: 198 IGSGLAAVAGV--ALTLIGSTSPTTGQSFLIDAFLVVVVGGLGQIKGTVIAALALGFLNS 255

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                       ++ F                   +  R   L  +RT S 
Sbjct: 256 FIEYNTTASLAKVIVFVIIVIF-------------LQARPQGLFTVRTRSL 293


>gi|323483241|ref|ZP_08088632.1| hypothetical protein HMPREF9474_00381 [Clostridium symbiosum
           WAL-14163]
 gi|323403514|gb|EGA95821.1| hypothetical protein HMPREF9474_00381 [Clostridium symbiosum
           WAL-14163]
          Length = 291

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 95/299 (31%), Gaps = 25/299 (8%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            +Y + A G +++ G + +L +    AY +GAY    +    G      I    +     
Sbjct: 14  SVYALTAMGATLIYGIMRILDIANAGAYVVGAYIGYYIYITTGNLPLAFILSMGLTGTIG 73

Query: 107 GMIMGLPSLKF--RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
            ++          +   L I  LI S     +      +  G         L F    + 
Sbjct: 74  VLVHKCLYGPILAKPHILPIIPLITSVGLFTLTGDLVRLICGAGTKAYNAELGFGAVHLG 133

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           +           ++       +L+    L   +   L +T +  AW+   +  +   ++ 
Sbjct: 134 NN----------IVIAPEWILILVLTAVLFLILWFILNKTTLGLAWKATAEAPEIARAVG 183

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                A   ++ +   F   AG       + I+      + +  +++I++LGG+ +    
Sbjct: 184 INTNSATALSYIIGYGFAAAAGIMVGILYNSIT-PALGETPSYKMLAIIVLGGLGNPVGT 242

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
             A   +     L       +                 +  I L L++L++   L+  +
Sbjct: 243 VIAGLFVGLSETLISVYIGSFIPKDS------------IAFIVLVLILLIKPSGLVSKK 289


>gi|288959987|ref|YP_003450327.1| ABC transporter permease protein [Azospirillum sp. B510]
 gi|288912295|dbj|BAI73783.1| ABC transporter permease protein [Azospirillum sp. B510]
          Length = 295

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 104/306 (33%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A    ++  +  +++        IGA++   L + + L  W+  P+
Sbjct: 8   LVNGLIVGALYGVVAMSFVLIYKASRIVNFAQGEFLLIGAWTCWWLLTSWQLPFWIGFPI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +     A G+I+ +  L+       I+ ++++     +         G            
Sbjct: 68  TLAFMLAFGVILQIVVLRPMIGEPIISVIMVTIGLSIVFQAAMKWMFGVFAKPFPPIFAS 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +             +  +      L+    + A    + + + +  A R    +Q+
Sbjct: 128 PTMNLFG-----------LEVQTVYVMSLVISILIMAGFGWFFKYSRVGLAMRATAFDQQ 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  ++      ++A+S+    +AG          S   F     I V   VILGG+
Sbjct: 177 VAQSLGISVRHMFAMSWAISAMVSAVAGVTVGVVNGVSSALSF---FGIKVFPAVILGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +  +   ++  + N    ++ +            L  +++++ + 
Sbjct: 234 DSVIGAVVGGLIVGVLENMAHYLDSQWLNWGNMYEIAP--------FYVLIAILMIKPYG 285

Query: 339 LLRLRT 344
           L   + 
Sbjct: 286 LFGTKD 291


>gi|206577292|ref|YP_002239789.1| sugar ABC transporter, permease protein [Klebsiella pneumoniae 342]
 gi|238893624|ref|YP_002918358.1| putative monosaccharide-transporting ATPase [Klebsiella pneumoniae
           NTUH-K2044]
 gi|288936628|ref|YP_003440687.1| inner-membrane translocator [Klebsiella variicola At-22]
 gi|206566350|gb|ACI08126.1| sugar ABC transporter, permease protein [Klebsiella pneumoniae 342]
 gi|238545940|dbj|BAH62291.1| putative monosaccharide-transporting ATPase [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
 gi|288891337|gb|ADC59655.1| inner-membrane translocator [Klebsiella variicola At-22]
          Length = 355

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/300 (11%), Positives = 84/300 (28%), Gaps = 10/300 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      + +    +   +  M   + I  + A G+++V+   G + L+      
Sbjct: 17  FIALLLVIAFFSVMVPNFLTASNLLIMTQHVAITGLLAIGMTLVI-LTGGIDLSVGAVAG 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I       L +         I    +      + +    +      +     +   I   
Sbjct: 76  ICGMVAGALLTNGLPLWNGDILFFNVPEVILCVAIFGVLVGLVNGAVITRFGVAPFICTL 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            ++         + +   D   +        +    F +      + +Y  +  M     
Sbjct: 136 GMMYVAR----GSALLFNDGSTYPNLNGMEALGNTGFATLGSGTLLGVYLPIWLMIGFLV 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +T +      I  N+ A       I+ AK+  +A S       G   A+    
Sbjct: 192 LGYWLTTKTPLGRYIYAIGGNESAARLAGVPIVKAKIFVYAFSGLCAAFVGLIVASQLQT 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + V     + GG   ++       +++ + +    M    F  ++
Sbjct: 252 AHPMTGNMFEMDAIGATVLGGTALAGGRGRVTGSIIGAFVIVFLADGMVMMGVSDFWQMV 311


>gi|261407685|ref|YP_003243926.1| inner-membrane translocator [Paenibacillus sp. Y412MC10]
 gi|261284148|gb|ACX66119.1| inner-membrane translocator [Paenibacillus sp. Y412MC10]
          Length = 322

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 96/311 (30%), Gaps = 18/311 (5%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +     VV  L              I  + +   +  + A G + V+   G + L+    
Sbjct: 14  LALASLVVLVLFFTFSSSNFFQFSNIVGILLSTAVIGVLALGSTFVI-ITGGIDLSVGTV 72

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             +      +  + +GL + + I    +    CG++ G    K +               
Sbjct: 73  MTLSGVMTGVCITFWGLPVPVGILGGILTGALCGLLSGTAVAKMKIPPFIAT-------- 124

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
               +    I  G A I    +  +                 +++  + +   ++     
Sbjct: 125 ----LAMMMIAKGLALIISGAKPVYFNDAESFAEVSQGSVLGWLVPGLDIPNAVVIFFIA 180

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +    L L +T I      +  N++A       + F K+  + ++ AF G+AG   A+  
Sbjct: 181 AILGYLILSKTIIGRYNFALGSNEEATRLSGVNVGFWKIVIYTLTGAFTGLAGVMMASRL 240

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +  +P +    E   + ++VI      GG  ++        I+  +      ++      
Sbjct: 241 NSANPALGAGYELEAIAAVVIGGTSLSGGKGTIIGTVIGALIMSVLTNGLRILSVPQEWQ 300

Query: 309 LLKFDCSFNMR 319
            +       + 
Sbjct: 301 TVVVGFVIILA 311


>gi|171058533|ref|YP_001790882.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
 gi|170775978|gb|ACB34117.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
          Length = 343

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 46/327 (14%), Positives = 105/327 (32%), Gaps = 37/327 (11%)

Query: 51  MFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIM 110
           M + GL+++   +G+L+      Y +GAY          L  W  + ++ +  G  G + 
Sbjct: 20  MLSAGLTLIFSMMGVLNFAHASFYMLGAYLG--HSLAAPLGFWPALLLAPIAVGLLGALF 77

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
               L+    +  +  L+++     ++++   +  G+  +         GT    +    
Sbjct: 78  ERGVLRRLRGHGHVPELLVTFGLSYVVLEGVQLLWGRGPVAFQPPALLQGTAFTIVQSSV 137

Query: 171 RFPSSFVI-------------------YEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              S                       + +   ++++    +  ++ L LRRT I    +
Sbjct: 138 HGLSLVAGQAGAELCRGGADELVSCARFPMTRAFMMVVALLMLLALGLLLRRTRIGLVIQ 197

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
               + +   +L   +    +  F    A   +AG         ++          IV  
Sbjct: 198 AALAHPQMVEALGHDVPRVFMWVFGGGCALAALAGVIGG--ITFVTEPSMAAVMGSIVFV 255

Query: 272 IVILGGMTSLSKIAKATAILIGVVEL--------------CCGMNFYYFNSLLKFDCSFN 317
           +V++GGM SL+     + ++  +  L                               +  
Sbjct: 256 VVVVGGMGSLAGAFVGSILIGLLQTLPLAVDGSLASLLNALGAGVDARTPGWPILRITLA 315

Query: 318 MRHTTLMVIALFLVILMRSHSLLRLRT 344
                L  + L L++++R   LL  R 
Sbjct: 316 QAAPILPYLLLVLMLIVRPRGLLGARD 342


>gi|170694689|ref|ZP_02885840.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
 gi|170140320|gb|EDT08497.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
          Length = 341

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 102/311 (32%), Gaps = 18/311 (5%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +     ++  +       A      I  +     +  + A   + V+   G + L+    
Sbjct: 33  LAFASLILLLVFFSFASPAFMQMDNILGILQATAVNGVLAIASTFVI-ITGGIDLSVGTL 91

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
               A    +  + + L +WL +  +      CG I G  + K +         +M  + 
Sbjct: 92  MTFTAVICGVFLTYWHLPMWLGVLAAIGTGAICGTISGTLTAKMKIPPFIATLGMMLLLK 151

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
              L+              AD+  +   T    +        + +  + +   +L + FL
Sbjct: 152 GLSLV------------VSADKPIYFTDTENFYMISQDSLIGYFVPSLPIPNAVLILFFL 199

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           + +  + L RTA+      +  N++A       +   K++ + +  A  G+AG   A+  
Sbjct: 200 AIASSITLNRTALGRYTFALGSNEEAVRLSGVNVDRWKIAIYGLGGAICGIAGLLIASRL 259

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +   P + +  E   + ++VI      GG  ++        I+  +      M+      
Sbjct: 260 NSAQPALGQGYELEAIAAVVIGGTSLSGGSGTILGTIIGAFIMSVLTNGLRIMSVAQEWQ 319

Query: 309 LLKFDCSFNMR 319
           ++       + 
Sbjct: 320 IVVTGLIIILA 330


>gi|163758142|ref|ZP_02165230.1| branched-chain amino acid ABC transporter, permease protein
           [Hoeflea phototrophica DFL-43]
 gi|162284431|gb|EDQ34714.1| branched-chain amino acid ABC transporter, permease protein
           [Hoeflea phototrophica DFL-43]
          Length = 336

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/332 (10%), Positives = 87/332 (26%), Gaps = 19/332 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L   A  S   +           + A G++++ G L   +       A G  + +++  
Sbjct: 3   ILNALALLSNFLVIPALAYGSQLALGALGVTLIYGILRFSNFAHGEMMAFGTMTVILVTW 62

Query: 87  RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
                           L +P   + +    +       +F     +   + +      + 
Sbjct: 63  FLQAQGISLGFLPTELLALPFGILGTVLLALGTDRIVYRFHRAKKSPPVIFLIVSLAVMF 122

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                I                        R +      +         ++      A++
Sbjct: 123 FYSGLIRFIIGPDDRNMGDGARFIFTAREFREWSGLDEGIALRTTQGITVVVTLICVAAL 182

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L RT    + R   DN+              L A+ +++A   +AG  +   +    
Sbjct: 183 FWFLNRTRAGKSMRAYSDNEDLALLSGVNPERVVLIAWTLAAALATIAGTMYGLDKTF-- 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309
                    + + +  I+GG+ S         ++             +   +    +   
Sbjct: 241 KPFIYLQLLLPIFASAIVGGLGSPIGAVAGGFVIAFSEITVTFAYKRVLTYLTPGDYVPD 300

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                        +  + L +V+L+R   + R
Sbjct: 301 GLVQLLSTEYKFAVSFVILVVVLLVRPTGIFR 332


>gi|83594837|ref|YP_428589.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
 gi|83577751|gb|ABC24302.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
          Length = 297

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 98/306 (32%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A    ++  S  +++        IGA+    L + + L   L    
Sbjct: 10  LLNGVIVGTLYGVVAMCFVLIYKSTQVVNFAQGEFLLIGAWVCFSLLTDFQLPFVLGFLF 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +   A G+++ +  L+       I+ ++++      L        G++          
Sbjct: 70  TLVFMMAFGVLLQVVVLRPMIGEPIISVIMVTIGLSIFLRALVNWVFGQSARS------- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +        + +  E            +      + R +    A R    +Q+
Sbjct: 123 ----FPKIFEAESVTIAGLNVEPAYLMSFAISIIIMIGFYYFFRYSRHGLAMRATAFDQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL  ++      A+A+S+    +AG          S   F     I V   VILGG+
Sbjct: 179 AAQSLGISVKRVFAMAWAISAMVSALAGVVMGMVNGVSSALSF---VGIKVFPAVILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +      ++  Y +       +            L  +++++ + 
Sbjct: 236 DSIIGAIVGGLIIGVLENGAEFVDGQYLHWGNMLTIAP--------FWVLIAILVIKPYG 287

Query: 339 LLRLRT 344
           L   + 
Sbjct: 288 LFGTKK 293


>gi|154252421|ref|YP_001413245.1| inner-membrane translocator [Parvibaculum lavamentivorans DS-1]
 gi|154156371|gb|ABS63588.1| inner-membrane translocator [Parvibaculum lavamentivorans DS-1]
          Length = 317

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 59/328 (17%), Positives = 113/328 (34%), Gaps = 39/328 (11%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           V   L    + A      + +    + + V+FA    ++ G +G  S   ++ + IG Y+
Sbjct: 9   VMAALAVFGIAAPFLLPGLVTQLAFLWLMVVFALTWDMLGGRMGYNSFGNIVFFGIGCYA 68

Query: 81  YVILGSRYGLSIW----LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
             ++    GL  +    L +   A+++    ++ G   L  RG Y AI TL +       
Sbjct: 69  AAVIQRDAGLPFFEGLALGLVAGAVLAVLAAVVFGAAMLGIRGHYFAIGTLGLGIAAGET 128

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
              W  +  G                    +    +P      E F  Y LL +  L   
Sbjct: 129 ASGWDYVGAGSG------------------LALPLYPGDLGSREFFFCYSLLALAALCFL 170

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
              WL  T    A   IRD+Q    ++       K+ A++VS+ F+G++G   A     I
Sbjct: 171 TCRWLYGTRFGLALNAIRDDQDKADAMGLRTTQIKIFAWSVSALFLGISGGLAANMIGFI 230

Query: 257 SPDMFKF---SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
            P    F   +  + ++ + ILGG  +L        +     E+       +        
Sbjct: 231 DPRDVAFAGATFGVWMVLMAILGGKGTLWGPVIGAFVFHVTQEIFWTYLLGW-------- 282

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     +   + ++++     ++ 
Sbjct: 283 ------QRVALGALIVIIVVFFPQGIMG 304


>gi|23012838|ref|ZP_00052832.1| COG0559: Branched-chain amino acid ABC-type transport system,
           permease components [Magnetospirillum magnetotacticum
           MS-1]
          Length = 295

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 107/318 (33%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           ++  L +        +    I    Y M + GL+++ G L +++ +    Y +GA+   +
Sbjct: 1   MMTILGIPTQALFGQLLLGLINGAFYAMLSLGLALIFGLLNIINFSHGALYMMGAFVAWL 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
             +  GL  W  +  + ++    G+I+    L        +  L+++     I+      
Sbjct: 61  ALNFLGLGYWGALIAAPLVVAVIGIIIERTMLCRLYKLDHLYGLLLTFGLALIIEGLFRE 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G +G   A      G           +   F+   I+  +V++    L       + +
Sbjct: 121 GYGVSGQPYAVPPALAG----------GWNLGFMFLPIYRGWVVVASLVLCLGTWYAIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N     +    +       +    A   +AG   A             
Sbjct: 171 TKLGAYLRAGTENPTLVQAFGINVPLMITLTYGFGVALAAIAGVLAAPIYQV--SPKMGS 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
              I+V ++V++GGM S+        +L  V  L                  +    +T+
Sbjct: 229 DLIIVVFAVVVIGGMGSIMGSILTGYMLGIVEGLTKVF--------------YPEAASTV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           + + + +V+L++   L  
Sbjct: 275 IFMVMVVVLLIKPAGLFG 292


>gi|332558363|ref|ZP_08412685.1| branched chain amino acid ABC transporter inner membrane protein
           [Rhodobacter sphaeroides WS8N]
 gi|332276075|gb|EGJ21390.1| branched chain amino acid ABC transporter inner membrane protein
           [Rhodobacter sphaeroides WS8N]
          Length = 431

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 53/315 (16%), Positives = 107/315 (33%), Gaps = 22/315 (6%)

Query: 50  VMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMI 109
            + A  +        +         AI    Y       GL + L  P   +++      
Sbjct: 118 ALLAVLIGGFFAYRAIFDPAVAAIEAINPALYG-NIGGLGLPVLLAWPAGGLLAALAAWA 176

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           +G  +L  R DYLAIATL ++EI   ++     +  G   +    R       ++    F
Sbjct: 177 IGKTALGLRSDYLAIATLGIAEIIIAVMKNEDWLARGVKNMISLPRPVPYEVDLQQSAGF 236

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWL---------RRTAISNAWRTIRDNQKAF 220
             +   +    +    +++ +C+ +  + +            R+      R IRDN+ A 
Sbjct: 237 VAWAQGWGYDPVTASAIVVKLCYAALFVAVLAIIVTLSELALRSPWGRMMRAIRDNEVAA 296

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS-ENIIVISIVILGGMT 279
            ++   +    L  F + +A IG+AGA       +++P  +       +V  +VI+GG  
Sbjct: 297 EAMGKDVTRRHLQIFVLGAAVIGIAGAMMTTLDSQLTPGTYNPLRFTFLVWVMVIVGGSG 356

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR-----------HTTLMVIAL 328
           S         ++  +  +   +      ++       +                 M + L
Sbjct: 357 SNWGAVLGGFLIWWLWVMVEPIGLSLLGAITAGMADGSWLKAHLQDSAAHMRLLTMGLIL 416

Query: 329 FLVILMRSHSLLRLR 343
            LV+      L+  R
Sbjct: 417 LLVLRFSPRGLIPGR 431



 Score = 36.4 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 27/69 (39%)

Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
          G  +S      +    LI  + A G+++  G  GL ++  +   A+G  + V+  ++   
Sbjct: 19 GVLQSWNSALGILNMALISAIMALGVNMQWGYAGLFNVGVMGFVALGGLAVVVTAAQPVP 78

Query: 91 SIWLLIPVS 99
            +      
Sbjct: 79 GAFSAGGWG 87


>gi|326203045|ref|ZP_08192911.1| inner-membrane translocator [Clostridium papyrosolvens DSM 2782]
 gi|325986691|gb|EGD47521.1| inner-membrane translocator [Clostridium papyrosolvens DSM 2782]
          Length = 320

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/322 (11%), Positives = 88/322 (27%), Gaps = 32/322 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L K+  ++ L  V+    L            + ++  Q  I  + A G++ VV   G + 
Sbjct: 16  LEKFATLIGLFLVILIFALL--KPKFLDVNNVFNLLRQASINGLLALGMTFVV-LTGGID 72

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA-- 125
           L+             ++   + +  ++ + V   +    G + G+     +         
Sbjct: 73  LSVGSILGASGIFAALVAQNHSIPWFVAVLVGLGVGFILGSLNGIVISWLKVPAFVATLG 132

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            L ++     +    +P+     G                                 +  
Sbjct: 133 MLSVARGITYLASNAQPVPGLSEGFLKI----------------------GGGNVGIIPI 170

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            ++ +  +     + + +         +  N KA       +   K SA+ ++    G+A
Sbjct: 171 PVIILVVVFIICSILIYKAKYGRYIFGVGGNAKAARLSGINVKKIKWSAYMIAGVLAGLA 230

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G    +          +  E   + ++V+      GG   L        I+  +      
Sbjct: 231 GVVLTSRVSSGLAMAGQNYETDAIAAVVMGGTSLAGGKGRLWGTLVGVLIIAALNNGLDM 290

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           M    +  L+            
Sbjct: 291 MAVSSYWQLIIKGLIIIAAVMM 312


>gi|253582998|ref|ZP_04860216.1| monosaccharide-transporting ATPase [Fusobacterium varium ATCC
           27725]
 gi|251835204|gb|EES63747.1| monosaccharide-transporting ATPase [Fusobacterium varium ATCC
           27725]
          Length = 320

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/314 (12%), Positives = 98/314 (31%), Gaps = 25/314 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +V  ++  +   +  S   + ++ +Q  I  + A G+++++   G + L+     
Sbjct: 19  FVFSFLVLVIIATVINHSFLSWTNLSTLMLQSSIKGIIALGMTLII-ISGQIDLSVGSQC 77

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    ++      S  +++    +     G I GL + K +     +    MS    
Sbjct: 78  ALVA-GLGVVVLNRTESPLIMLLFCMVFGALLGTINGLITNKGKMAPFIVTLATMSAY-- 134

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                            +  +L   G     +     F        + +  + +    ++
Sbjct: 135 ---------------RSIIVQLGQGGPFNIKMKILMSFRKIAAGKFLGIPNLAIIFIIIT 179

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +++ ++ T        +  N+ A F     ++  K   F ++    G+A    ++   
Sbjct: 180 ILMVILVKYTKFGRYVYAVGSNENATFLTGVNVVKVKTLCFTLTGFLTGIASFLLSSRLT 239

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            I+      S  +  I+ V +      GG   +        +L  +  +        F S
Sbjct: 240 SITAANVGMSFELDAIAAVAIGGTSMNGGRGKIMGTFLGAIMLQMIEGILIAARIPPFLS 299

Query: 309 LLKFDCSFNMRHTT 322
            L       +    
Sbjct: 300 GLVKGIIIILAVIF 313


>gi|254720370|ref|ZP_05182181.1| hypothetical protein Bru83_12740 [Brucella sp. 83/13]
 gi|265985389|ref|ZP_06098124.1| inner-membrane translocator [Brucella sp. 83/13]
 gi|306837465|ref|ZP_07470341.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. NF 2653]
 gi|264663981|gb|EEZ34242.1| inner-membrane translocator [Brucella sp. 83/13]
 gi|306407508|gb|EFM63711.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. NF 2653]
          Length = 289

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 85/303 (28%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y       + GL+    I ++
Sbjct: 9   VDALAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMIGGYFASYAAQQLGLNYGFAIIIA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + +    + +     +       +  ++M+      +I       G     +       
Sbjct: 69  VVGTMIIAVPVERLLYRRIYGAPELTQVLMTIGVTFCIIGITNYIFGPTLKTIPLP---- 124

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                  +        F        + +     ++  +   + RTA     R   DN   
Sbjct: 125 ------EMLRGSVDLGFRAIAKHRIFAIGCGLAVAIGLWYAVERTAFGVKLRAAVDNANM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FA++       G   A          +     +  + +V +GG  
Sbjct: 179 AAALGVRTEIVYAVSFALAIGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L  +      +                        +A+ +++ +    L
Sbjct: 237 SIPGALIACLLLGAIDTTGRYLA--------------PEYGEFFFYLAVIVIVTLFPRGL 282

Query: 340 LRL 342
              
Sbjct: 283 AGR 285


>gi|225573163|ref|ZP_03781918.1| hypothetical protein RUMHYD_01354 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039478|gb|EEG49724.1| hypothetical protein RUMHYD_01354 [Blautia hydrogenotrophica DSM
           10507]
          Length = 325

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 95/321 (29%), Gaps = 25/321 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           ++ +   I   + V+  +   +   A  +   +  +  Q     + A G + V+   G +
Sbjct: 13  KIPRNRLISLGILVLLMVAATVMNPAFLTADNLLGILAQNSARGILALGATFVL-MTGGI 71

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L       + A    +     G ++ +L     ++  A G + GL   + R        
Sbjct: 72  DLAAENGLTMIAVVASVSHIMTGENLLVLFGGCLILGAALGCVNGLLITRLRLLPFVATL 131

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
            +MS      L                           +        S  + + I M  V
Sbjct: 132 AMMSIAQGITLF-----------------ASEGKIMFLNHPVTVFIGSGKLFHIIPMPVV 174

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +     + A I+L   +T +  A   +  N++A       +   +   +      + +A 
Sbjct: 175 IFAGMCVVAYILLN--KTKMGTAVYALGGNKEAAEYSGIQVKREETKVYIFDGICVAVAA 232

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
                   +ISP++ + +    + + VI     LGG  S+        I+  ++     +
Sbjct: 233 LVTVCRVGQISPNLGEGAGMDAIAAAVIGGTSTLGGRGSIGGTVVGVCIIGVIINALTFL 292

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
           N                    
Sbjct: 293 NVPVIAQDAAKGLIIIFAVIF 313


>gi|134095849|ref|YP_001100924.1| high-affinity branched-chain amino acid ABC transporter membrane
           protein [Herminiimonas arsenicoxydans]
 gi|133739752|emb|CAL62803.1| Putative high-affinity branched-chain amino acid transport system
           permease protein LivH/BraD [Herminiimonas
           arsenicoxydans]
          Length = 291

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 91/310 (29%), Gaps = 26/310 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ S      IY + A G  I+  +   ++        +GA   V+           + 
Sbjct: 6   QYVLSGLSIGAIYSLVALGFYIMWSACRSVNFAHGDVMMVGAVLAVVSNDFGLSPYIGIP 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                      ++       +  +  AI  ++ +     ++  +  I  G          
Sbjct: 66  LSIVACVLYGVLVERFAVRPYTKEANAIGWMLTTIAIGIMVESFVTIKFGS--------- 116

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + S               +    + L +      + ++ RRT +  A R +  N
Sbjct: 117 --FARALPSPGVDKPITIFGAGIYLQEMLIPLFVILFMIGLEVFYRRTMLGRAMRAVAFN 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +      +FA+++   G+AG          S         +   ++ I+ 
Sbjct: 175 RIAAGMMGINVGMVTSFSFALAAGLGGIAGILIGPIIQVSS--TMGVLIGLKGFAVAIMA 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
            +TS   +     +   + +   G        ++ F               + LV+LM  
Sbjct: 233 SITSARGVVITGLLYGVLEKFVEGYISSAAREVVGFS-------------IMILVLLMFP 279

Query: 337 HSLLRLRTPS 346
             L   +  +
Sbjct: 280 QGLFGRKELT 289


>gi|330720844|gb|EGG99041.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [gamma proteobacterium IMCC2047]
          Length = 292

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 88/304 (28%), Gaps = 25/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I S      +Y +    LS++ GS+G+L++      AIG YS   + S        ++PV
Sbjct: 8   IVSGLTVGAMYAVGTLALSLLWGSMGMLNMAHGAFIAIGGYSAYWVMSVLDGHWIFVLPV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+     G             Y  +   +       + I    +            +  
Sbjct: 68  AALAGMIAGYA----------LYHLVVRWMYERDDFPVNIIIVTVAIAALVENSILNISG 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                +       F  + V+        L     +   +   + RT +    R +  N+ 
Sbjct: 118 PSALRQPFKIPSGFNVADVVVPYQTLLTLAIAIAMMILVSWMVNRTKVGYVIRAVSQNKD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +  A   A  ++     ++G                +   I    I I+ G+
Sbjct: 178 AALLMGINVRLAFSQALVIAGGIAAISGVMVTGMTQL--FPAVGYDTTIKSFIICIIAGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L         +    +                 M+  + LV++ R + 
Sbjct: 236 GNIPGAVIMAFVLGMFEISVQYIFGQRYGFPA-------------MLGLVVLVLIWRPYG 282

Query: 339 LLRL 342
           +   
Sbjct: 283 VFGR 286


>gi|148254333|ref|YP_001238918.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146406506|gb|ABQ35012.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 277

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 91/297 (30%), Gaps = 22/297 (7%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
             L+Y + A GL+++ G + +++        I  Y+   L + + L   L  P+ A    
Sbjct: 1   MGLLYGLIAVGLALIFGLMDVVNFAHGEFLMIAMYATFFLFAFFALDPLLSAPLVAAALF 60

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
             G ++ L  ++F       A    +      +     +     G+          +   
Sbjct: 61  IFGAVVYLLIVRF-------AVRAKANTGMVQIFSTFGLAVLMRGVAQYFFTPDYRSIPH 113

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           S +       + +          L      A +  ++ RT    A    R++  A   + 
Sbjct: 114 SWLGGKTISIAGIYLPQPQLVGALIAIAAFAGLYFFIHRTDFGRALEATREDAGAVALVG 173

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                     + + +A +G+AGA  A            F+    V   V LGG  S+   
Sbjct: 174 IDKNKVFALGWGLGAALVGLAGAVMAIFFYVFPDVGASFATIAYVT--VALGGFGSVFGA 231

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                ++  V  +   +      ++  +                 LV+ +R   L  
Sbjct: 232 FAGGIVVGLVEAITTLILPPSLKTVGIYGVY-------------LLVVFIRPRGLFG 275


>gi|332529304|ref|ZP_08405266.1| ABC transporter ATP-binding protein [Hylemonella gracilis ATCC
           19624]
 gi|332041221|gb|EGI77585.1| ABC transporter ATP-binding protein [Hylemonella gracilis ATCC
           19624]
          Length = 345

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 60/300 (20%), Positives = 114/300 (38%), Gaps = 25/300 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +     ++  L V+     +       + +++ SM +  L+YV  +    +  GS   LS
Sbjct: 4   MTSRQILIRDLLVLLAFTGWALALPAYASEFVASMALTCLMYVALSSSWGLFCGSTRYLS 63

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L     + IGAY+  IL   +  +   +I + A I+    ++MG   L  RG Y A+ T 
Sbjct: 64  LATSAFFGIGAYTSAILLGEF--AWLTVILIGAGIAVVVAVLMGAAVLHLRGTYFAVLTF 121

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            M+E+  + +  ++    G  G  +                              +Y  +
Sbjct: 122 GMTELILHAVTYFEKSVTGTVGRVLMVVPERET----------------------IYLTV 159

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +  L+ +  + +RRT    A   I  +++   +L       K++ FA+++AF G  GA
Sbjct: 160 LALAVLAVATSIVVRRTRFGLALLAIGADEQRAQTLGVNTRLVKVAGFALTAAFAGAVGA 219

Query: 248 FFAASRDRIS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             A     I    +F        + I ++GG+ +L     A  I   + E         +
Sbjct: 220 AMAVRWTYIDPHTVFNPFIGFQTVLITLIGGVLTLWGPLLAAIIFSVLAESLRLQFPQIY 279


>gi|260467379|ref|ZP_05813551.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259028839|gb|EEW30143.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 303

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 89/304 (29%), Gaps = 16/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I    Y + A G S+V G + LL+      Y  GA+  +I+ S  G+ +      
Sbjct: 10  LVNGLIVGSFYALIALGYSMVFGVIKLLNFAHGDIYMNGAFVGLIVFSFVGIWVGNGWLG 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                    +++GL  +                      +    + NG A      R   
Sbjct: 70  VVCALLVSMLVVGLLGVVIERFAYRPMRNAPRLSILITALGASMVLNGTALALTGGR--- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 + + F     S V        ++     L   +  ++ RT    A R +  +  
Sbjct: 127 -HYAFNTDLGFAGIDISTVHITYTQVVLVAASIALMTGMQAFVSRTMYGKAMRAVSIDMG 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       F + SA     G    A    +   M  F   +   +  ++GG+
Sbjct: 186 ASRLMGIDVDRVIALTFFMGSALAAGGGVMAGAYYGSVHFFM-GFIMGLKAFTAAVIGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L  +      +               +      +   L L ++ +   
Sbjct: 245 GSVPGAMLGGLLLGLLEAFGSSL-----------PFVGSEWRDVFVFGTLILFLVFKPTG 293

Query: 339 LLRL 342
           LL  
Sbjct: 294 LLGR 297


>gi|255264167|ref|ZP_05343509.1| RhaP [Thalassiobium sp. R2A62]
 gi|255106502|gb|EET49176.1| RhaP [Thalassiobium sp. R2A62]
          Length = 326

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 97/320 (30%), Gaps = 23/320 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L   +  L L   V   ++     A  +   + ++       ++ A G  IV+     + 
Sbjct: 5   LASREAFLMLAIAVLLAVVAWRFPAFVAPSNLLNVFNDTSPLILLAIGQMIVI-LTKCID 63

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+      ++         +LI + A+  G    +     +        + TL
Sbjct: 64  LSVAANLALTGMVVSLINISAPGLPVILIVLIAIGFGTLLGMFNGVLVWKLAIPPIVVTL 123

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               IF+ I+                      G  V S      F S      + +  + 
Sbjct: 124 GTMTIFRGIIFLLTE-----------------GKWVNSHEMSDSFKSVPRTDLLGLPILS 166

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                      + + RT++  A+     N  A       +   +  AF +S A  G+AG 
Sbjct: 167 WIAISTVILFTMVMTRTSLGRAFYAAGGNPHAATYAGINVGKTQFWAFTISGAIAGLAGY 226

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
            + +       D+    E  +V + V     I+GG+ ++         L  +      +N
Sbjct: 227 LWVSRFAVAYVDVAGGFELTVVAACVIGGVSIMGGVGTVFGALLGALFLGIIANALPVVN 286

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F+ +     +  +    
Sbjct: 287 ISPFSQMAISGGAIIIAVIL 306


>gi|225569661|ref|ZP_03778686.1| hypothetical protein CLOHYLEM_05755 [Clostridium hylemonae DSM
           15053]
 gi|225161131|gb|EEG73750.1| hypothetical protein CLOHYLEM_05755 [Clostridium hylemonae DSM
           15053]
          Length = 315

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 49/316 (15%), Positives = 87/316 (27%), Gaps = 26/316 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L  + +   ++L    G   +   + ++  QI I  + A G++IV    G + L+  
Sbjct: 15  TYMLIFIVIGLGIILSFISGNFLTGTNLLNVLRQISINGILAIGMTIVC-LTGGIDLSVG 73

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
              A        L       I L++ ++  I G  G+  G     +              
Sbjct: 74  SIVAFSGIIAAGLLRDKEYPIALIVLIAIAIGGLLGLYNGYFVAYWNAAPF--------- 124

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
               + +    I  G   +Y   R      T    I         V   I +   +L   
Sbjct: 125 ---VVTLSMMTIARGMTYVYSTGRPISNLPTEFLAIGKGSIAGVPVPTIILIIVFILASV 181

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                    L +         +  N+ A       +   K+  + +S    G+A     A
Sbjct: 182 M--------LTKLKFGRYVYAVGGNENAAMVSGINVKRIKMMVYVLSGIACGIAAIILTA 233

Query: 252 SRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                 P   +  E   + + VI      GG   L        +L  V      MN   F
Sbjct: 234 RVSAGLPTAGESYELDAIAATVIGGTSLSGGRGRLWGTIVGAILLGIVNNGLDLMNVSSF 293

Query: 307 NSLLKFDCSFNMRHTT 322
              +            
Sbjct: 294 YQQIVKGLIILGAILI 309


>gi|170748235|ref|YP_001754495.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
 gi|170654757|gb|ACB23812.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
          Length = 306

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 71/326 (21%), Positives = 121/326 (37%), Gaps = 36/326 (11%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             +    +L           YI  +      + +F+    ++ G  G ++        +G
Sbjct: 9   FWIAVLAVLAAATLPWWVSGYILGLLTIAYYFGVFSMAWDLLFGFAGEVNFGPTFLIGLG 68

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY   IL +RY L I   +    +++   G+ + LP+LK RG Y  + TL+   + QN++
Sbjct: 69  AYGAGILNNRYELPIPYCLAAGTVLAVVGGLALALPALKVRGPYFGLITLVAVLLLQNMI 128

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           + +  +T G+ G+ V D +                           Y++ LG   +S  I
Sbjct: 129 VVFSGLTGGEIGLTVPDVISIDAD--------------------TNYWLALGFMAVSGLI 168

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +  + R+      +    +     +L   +   KL+AFAVS+AF G+AG          S
Sbjct: 169 LTAIARSPAGLILQAAGQDPVVTGALGFNVAKHKLAAFAVSAAFSGLAGGLVVFYMGTAS 228

Query: 258 PDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
                  S  + VI   +LGG  ++   A     LI   EL   +               
Sbjct: 229 VGTLINTSVGVQVIIAAVLGGRRTIVGAALGAVFLIAAGELLRPLGG------------- 275

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRL 342
               T ++     LVIL     LL L
Sbjct: 276 --LSTFVVSAVALLVILFVPSGLLGL 299


>gi|23500393|ref|NP_699833.1| branched-chain amino acid ABC transporter permease [Brucella suis
           1330]
 gi|23464013|gb|AAN33838.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella suis 1330]
          Length = 289

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 86/303 (28%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y       + GL+    I ++
Sbjct: 9   VDALAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMIGGYFASYAAQQLGLNYGFAIIIA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + +    + +     +       +  ++M+      +I       G            L
Sbjct: 69  VVGTMIIAVPVERLLYRRIYGAPELTQVLMTIGVTFCIIGITNYIFGP----------TL 118

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T     +        F        + +     ++  +   + RTA     R   DN   
Sbjct: 119 KTIPLPEMLRGSVDLGFHAIAKHRIFAIGCGLAVAVGLWYAVERTAFGVKLRAAVDNANM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FA++       G   A          +     +  + +V +GG  
Sbjct: 179 AAALGVRTEIVYAVSFALAIGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L  +      +                        +A+ +++ +    L
Sbjct: 237 SIPGALVACLLLGAIDTTGRYLA--------------PEYGEFFFYLAVIVIVTLFPRGL 282

Query: 340 LRL 342
              
Sbjct: 283 AGR 285


>gi|295090709|emb|CBK76816.1| Ribose/xylose/arabinose/galactoside ABC-type transport systems,
           permease components [Clostridium cf. saccharolyticum
           K10]
          Length = 332

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 92/313 (29%), Gaps = 12/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + +   LL      A  +   +  +  Q  +Y + A G++ V+   G + L+     
Sbjct: 18  IVFVLLGLILLWSCLSDAFFTTNNLLLIIKQATLYGILAIGMTFVL-ITGGIDLSVGSIV 76

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A       S   + + +       +     + +G+      G  +A   +    +  
Sbjct: 77  ALSAVFAARYCSGDNIDLPIA------VPILISVAIGILCGAVNGFGIAFCRIPPFIMTM 130

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +++  +              L      + +      F  S  +    + Y++       
Sbjct: 131 CMMLAARGAAYVYTNAKAIFNLNQEFVNISNGFLGRTFDESGKVVNYGIPYMVFYFIAAM 190

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              ++ L  T        +  N++A           + S + +S    G+ G   A+   
Sbjct: 191 IIGVILLHFTTYGRKVYALGGNKEAARYSGINTKLIEFSVYVLSGLCAGICGFLMASRIS 250

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + +     E  ++ + VI      GG+ ++        I+  +      +    +   
Sbjct: 251 SGNANSADGYEMTVISAAVIGGVSLSGGVGTMYGTMIGVLIVGVISNGMDILGINTYFQQ 310

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 311 ILQAAIIFTAVYI 323


>gi|262041339|ref|ZP_06014546.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259041308|gb|EEW42372.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 355

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/300 (11%), Positives = 85/300 (28%), Gaps = 10/300 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      + +    +   +  M   + I  + A G+++V+   G + L+      
Sbjct: 17  FIALLLVIAFFSVMVPNFLTASNLLIMTQHVAITGLLAIGMTLVI-LTGGIDLSVGAVAG 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I +     L +         I    +      + +    +      +     +   I   
Sbjct: 76  ICSMVAGALLTNGLPLWNGDILFFNVPEVILCVAIFGVLVGLVNGAVITRFGVAPFICTL 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            ++         + +   D   +        +    F +      + +Y  +  M     
Sbjct: 136 GMMYVAR----GSALLFNDGSTYPNLNGMEALGNTGFATLGSGTLLGVYLPIWLMIGFLV 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +T +      I  N+ A       I+ AK+  +A S       G   A+    
Sbjct: 192 LGYWLTTKTPLGRYIYAIGGNESAARLAGVPIVKAKIFVYAFSGLCAAFVGLIVASQLQT 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + V     + GG   ++       +++ + +    M    F  ++
Sbjct: 252 AHPMTGNMFEMDAIGATVLGGTALAGGRGRVTGSIIGAFVIVFLADGMVMMGVSDFWQMV 311


>gi|227821176|ref|YP_002825146.1| branched-chain amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
 gi|227340175|gb|ACP24393.1| branched-chain amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 295

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 55/316 (17%), Positives = 108/316 (34%), Gaps = 26/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    I    Y + + GL+I+ G L +++      Y +G ++  +L S
Sbjct: 4   IFGVPIAVLLGQLLLGLINGSFYALLSLGLAIIFGMLNVINFAHGAFYMLGGFAAWLLLS 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL  W  +  + ++ GA G ++    LK       + +L+++     +L        G
Sbjct: 64  ALGLGYWETLIAAPLMVGALGAVVERLFLKRLYRVDHLYSLLLTFGIALMLEGLLRHVYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            AG          G               F+   ++  +V++    +  +  L + RT +
Sbjct: 124 AAGKPYPIPPSLTG----------GINLGFMFLPMYRAWVIVASLAVCIATWLAIERTKL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N     +    + F   + +A      G AGA  A             S  
Sbjct: 174 GAYLRAATENPGLVQAFGINVPFMLTATYAFCVGLAGFAGALAAPLYQV--SPGMGSSVI 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+         L  +  L                  +    +  + +
Sbjct: 232 IVVFAVVVIGGMGSIGGAIVTALALGIIEGLTKTF--------------YPAASSIAVFV 277

Query: 327 ALFLVILMRSHSLLRL 342
            + LVIL+R   L   
Sbjct: 278 VMVLVILIRPSGLFSR 293


>gi|163815863|ref|ZP_02207233.1| hypothetical protein COPEUT_02042 [Coprococcus eutactus ATCC 27759]
 gi|158448673|gb|EDP25668.1| hypothetical protein COPEUT_02042 [Coprococcus eutactus ATCC 27759]
          Length = 339

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 95/313 (30%), Gaps = 25/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ ++  + + L      +   I S+  QI I    A G+++++  LG + L+     
Sbjct: 29  IIVVLIIMCVAVALATDKFLTTNNIISVLRQISINTYIALGMTLII-ILGHIDLSVGSIV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+     V      GL + + I    ++  A G I G     F+     I          
Sbjct: 88  AMSGTLTVGFIVNQGLPLGVAIVAGLLVGTAAGFISGFIVANFKVPAFIITM-------- 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                   + N  +GI               L         F +  + + Y+++ +   S
Sbjct: 140 -------AMMNIASGIAYVYTGGQSTRITNKLFIEIGTGYLFNVIPLPVVYMVVLIILFS 192

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +     +T        I  N++A       I   ++  F +S      AG    +   
Sbjct: 193 FIL----SKTKFGTYIYAIGGNREAARLSGVPIKKIEIIVFTISGLLSAFAGLVLCSRMY 248

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P +    E   + + V     + GG   +S       ++  +      +    +  L
Sbjct: 249 SGQPSVGSGYELDAIAACVLGGTSMTGGKGRISGTVFGAMVIGIISNGLNLIGVSSYWQL 308

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 309 IIKGLIIACAVLL 321


>gi|55380245|ref|YP_138094.1| branched-chain amino acid ABC transporter permease protein
           [Haloarcula marismortui ATCC 43049]
 gi|55232970|gb|AAV48388.1| branched-chain amino acid ABC transporter permease protein
           [Haloarcula marismortui ATCC 43049]
          Length = 365

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 51/361 (14%), Positives = 106/361 (29%), Gaps = 42/361 (11%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQ--------KYIDSMGIQILIYVMFAWGLSIVVGSL 63
             +L + AV+   L+F  L    +          Y+ +  +  +   +   GLS+    L
Sbjct: 17  RPVLVIFAVIGVFLVFDILRQVGTGTVAITDLMSYLWNGLVLGMSLGLAGVGLSMTYSIL 76

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
              +         GA++               +    +I G   +      +      LA
Sbjct: 77  NFANFAHGDLITSGAFAGWATAFLIAGLGEFSVESLILIGGPIAVGSNELGINVVNTPLA 136

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR------------------- 164
           +   ++        +           +  AD +  +  +V                    
Sbjct: 137 LLAGLLVAAVLTAALSLLLDRIVFRPMRSADGVTLMIASVGVALFLRNFLTYSFLTDSRG 196

Query: 165 -SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
            +     +F  + V +      +++    L     + L+ T I  A R +  N+      
Sbjct: 197 LTGGNVPQFTVAGVTFGGHQITLVVVAALLMLGTHILLQYTKIGTAMRAMAANKDLAKVT 256

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
                      + +     G AG   A  +  ++  M  +   ++V + VILGG+ S+  
Sbjct: 257 GIPTERVVKLTWIIGGGLTGCAGFLIALQQGTLTVTM-GWDLLLLVFAAVILGGVGSIYG 315

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                 IL     L        F  +  F             + + +++L+R   L   R
Sbjct: 316 AMVGGVILGLASRLALVWIPASFLLVAAF-------------VIMIVMLLVRPSGLFSGR 362

Query: 344 T 344
           T
Sbjct: 363 T 363


>gi|37524089|ref|NP_927433.1| ribose ABC transporter permease protein [Photorhabdus luminescens
           subsp. laumondii TTO1]
 gi|36783512|emb|CAE12352.1| Ribose transport system permease protein RbsC [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 323

 Score = 59.9 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/312 (9%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 24  LIALLVLIAVVSSLSQNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L      ++  ++   A+ +        + +                + F  
Sbjct: 83  LTGAIVASLVGTEVNALVAIVSALALGAAIGACTGIIIAK------------GKVQAFIA 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +    L  +F       I       +++ +     
Sbjct: 131 TLVMMLLLRGITRVYTDGSPINTGFSDNADLFGWFGIGRPLGIPTPVWLMLIVFVITWYI 190

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T +      +  N+ A       I   K+  +++      +A     A    
Sbjct: 191 L-----HHTRLGRYIYALGGNESATRLSGINIDKIKIIVYSLCGFLTALASIIEVARLSS 245

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +       ++
Sbjct: 246 AQPMAGGGYELDAIAAVVLGGTRLAGGKGLIIGTLIGALILGFLNNGLNLLGISSNYQMI 305

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 306 VKAIVILLAVLV 317


>gi|225387369|ref|ZP_03757133.1| hypothetical protein CLOSTASPAR_01122 [Clostridium asparagiforme
           DSM 15981]
 gi|225046501|gb|EEG56747.1| hypothetical protein CLOSTASPAR_01122 [Clostridium asparagiforme
           DSM 15981]
          Length = 334

 Score = 59.9 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 86/296 (29%), Gaps = 26/296 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           LN    ++ +L +++             +K + ++     +  +   G+++    +G   
Sbjct: 16  LNDNSSVIAVLLLIFLGTAAYGTTFLNYKKNLINVLHTASMMGIMGLGVNLCF-LIGARD 74

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+ +     L         + +     +    G   G+    F+      ATL
Sbjct: 75  LSVGALAALVSMVTAWLA---PYGFPVAVAGGLTVGAVFGAFNGVIVSMFKVQPFI-ATL 130

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                 +   +      +   G       Y     V  LI F  F    +I         
Sbjct: 131 GTQLAARGFALLINKELSISLGTNAPQLKYVGNGNVFGLIPFPTFAFIILI--------- 181

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                    + + LR+         +  ++ +   +   +   K+  F +S      +G 
Sbjct: 182 -------LVLTVILRKKDFGRGVYAVGGDEGSAEMMGIHVNRTKIIVFTISGLMAACSGI 234

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELC 298
                     P   +  E  I+ ++V     + GG+  +  +      +  +  L 
Sbjct: 235 ILCGRLSAGQPTACEGWEMTIMAAVVLGGTSVRGGIGKIHGVFLGCLFVTFITNLI 290


>gi|297530334|ref|YP_003671609.1| inner-membrane translocator [Geobacillus sp. C56-T3]
 gi|297253586|gb|ADI27032.1| inner-membrane translocator [Geobacillus sp. C56-T3]
          Length = 286

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 102/304 (33%), Gaps = 28/304 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++Y M A GL+I++G + +++L     + +GAY          L+ W+ + +
Sbjct: 8   LLTGVAYGMLYFMIAAGLTIILGVMNVVNLAHGTLFMLGAYI-AFTFINEELNFWIALFL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  ++   G+ +    +K          L+   +   I    + I               
Sbjct: 67  AVFLTAIFGLFLEKWLIKHVYGKELEQVLLTFGLSFIIADAVEWIWG-----------TE 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           + T     +           + ++  +V+L  C L+  +     +T I    R   D++ 
Sbjct: 116 MHTLPVPDLLSGSLAIGSTAFPLYRLFVVLVGCLLALLLWYLETKTRIGAIIRAGVDDRA 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       FA  +A  G++G          +    +     ++  +V++GG+
Sbjct: 176 MVSALGINVGLVFTGVFAFGAALAGLSGVLGGPLIGMYTGMDSEILVTSLI--VVVIGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S          +  +  L                  F       + + + +V+++R   
Sbjct: 234 GSWKGSFIGAIAIGVIETLGK--------------VWFPSLSMLTVFLIMMIVLIIRPQG 279

Query: 339 LLRL 342
           L   
Sbjct: 280 LFGR 283


>gi|312196731|ref|YP_004016792.1| inner-membrane translocator [Frankia sp. EuI1c]
 gi|311228067|gb|ADP80922.1| inner-membrane translocator [Frankia sp. EuI1c]
          Length = 376

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 94/322 (29%), Gaps = 28/322 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             IL +  ++   +      A  S+  ID++     +  + A G+ I + + G   ++  
Sbjct: 24  LPILFVALILIFAIHPDSRDAFLSKANIDNILAGQSVTGIVALGMVIPL-TAGYFDVSIP 82

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               +   +      R+G  +W+ + V+ +I    G++ G+   + +             
Sbjct: 83  AIAGVANMACTAAIVRHGQPVWVGMLVALLIGVLLGVVNGVLVARLK------------- 129

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                L        G   +      Y  G T+  +        S     I     LL + 
Sbjct: 130 -----LNALIVTLGGFTVLQGLLNQYSDGATITGVPDSLGNWGSLKWLGIPRPLWLLFVV 184

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                +   L  T     +  +  ++ A   +   +      +F +S     +AG    +
Sbjct: 185 G--LILWYCLMHTPFGRQYEAVGSSEGAARLVGIRVERLVFLSFVLSGLTAAVAGILLTS 242

Query: 252 SRDRISPDMFKFSENIIVISIVILG------GMTSLSKIAKATAILIGVVELCCGMNFYY 305
                 P     S     ++ V LG      G  ++         +   +     +    
Sbjct: 243 RSGGADPTA-GPSYLFPGLAAVFLGATTIRPGTYNVWGTILGIFFVAVGINGFTLIGAKP 301

Query: 306 FNSLLKFDCSFNMRHTTLMVIA 327
           + + +    +         VI 
Sbjct: 302 WVNPVFDGAALIAAVLVSTVIG 323


>gi|226305052|ref|YP_002765010.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226184167|dbj|BAH32271.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 291

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 86/305 (28%), Gaps = 23/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +       + + A G+ +VV      +          A +   +   YGL++W+ +P+
Sbjct: 7   WLAAIEIGAFFSLIALGMYLVVVGADFFNFAMGPYAMAAAMASSWVAINYGLALWIAMPL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++ A  ++     +K          L        +L   + +     G         
Sbjct: 67  GIAVAVALSILTEKLVVKQVQKRSGRGELPALVAVTAVLFGIQQLAGTVFGRTPLPGQKI 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                     F          +     +++G   +   I LWL R+      R + D+  
Sbjct: 127 FD--------FDPISVLGATVDSSTVVLVVGTAVIFVGIGLWLNRSTSGRLLRAVGDSPD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +   +L AF ++     +AG  FA             S  +     +++GG 
Sbjct: 179 AARVLGLPVDRVRLIAFTLAGVIAAVAGLLFAPKAGV--QFTSGLSWTLTAFIALVIGGT 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                      +L  V                           T +++   +    R   
Sbjct: 237 GRSWAPLIGGMVLGVVQVFAPYYFGA-------------SAAQTAILLIALVFFAFRPEG 283

Query: 339 LLRLR 343
           LL  +
Sbjct: 284 LLSRK 288


>gi|307128772|ref|YP_003880788.1| D-ribose ABC transporter membrane protein [Dickeya dadantii 3937]
 gi|306526301|gb|ADM96231.1| D-ribose transporter subunit; membrane component of ABC superfamily
           [Dickeya dadantii 3937]
          Length = 322

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 94/313 (30%), Gaps = 25/313 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLILIAVVSSMSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  I-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           + GA +  I+G      + +   ++       G  + +   + +     +  +++     
Sbjct: 82  LTGAVAASIVGLEINALVAVFAALALGAVIGAGTGIVIAKGRVQAFIATLVMMLLLRGVT 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +     PI  G                         +        I     ++ + FL+
Sbjct: 142 MVYTNGSPINTG----------------FSDSADALGWFGIGRPLGIPTPIWIMAVVFLA 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +L   R  I      +  N+ A      ++   K+  +A+      +AG    A   
Sbjct: 186 TWYMLHHTR--IGRYIYALGGNEAATRLSGISVDRVKVVVYALCGLLSALAGIIEVARLS 243

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++V     + GG   +        IL  +      +    +  +
Sbjct: 244 SAQPTAGTGYELDAIAAVVLGGTSLSGGKGRVVGTLIGALILGFLNNGLNLLGVSSYYQM 303

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 304 IVKAVVILLAVLV 316


>gi|296156462|ref|ZP_06839300.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295893061|gb|EFG72841.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 328

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/322 (13%), Positives = 102/322 (31%), Gaps = 24/322 (7%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGA-TKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
           F+ RL    +I  L+A+V     F+   +   S + +  +  Q ++  + A G +++V  
Sbjct: 14  FADRLPSLAEIGPLIALVLACGFFISQSSRFLSFQNLSLILQQTMVVAVIAIGQTLIV-L 72

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G + L+C +  A G+          G+   L I      S   G + G+   + +    
Sbjct: 73  TGGIDLSCGMVMAFGSIIMTKFAVTLGVPPILAILCGIAASTLFGALNGVLITRIKLPAF 132

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
            +    ++  F    I                      +          F ++F +    
Sbjct: 133 IVTLGTLNIAFALTQIY-----------------SNAESVSNLPDALMFFGNTFRLGPAD 175

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           + Y  +    +  +    LR T        + +N +A   +  +     ++ ++++ A  
Sbjct: 176 VTYGTVLTLLMYLATWFVLRDTVPGRHLYALGNNAEAARLMGLSSQKILMTVYSLAGAIY 235

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVEL 297
           G+A     +      P   +      + ++V+      GG  S+        I+      
Sbjct: 236 GIAALLSVSRTGVGDPQAGQTENLDSITAVVLGGTSLFGGRGSIVGTLLGALIVGVFRNG 295

Query: 298 CCGMNFYYFNSLLKFDCSFNMR 319
              +       +L       + 
Sbjct: 296 LTLIGVSSVYQVLITGMLVILA 317


>gi|72384024|ref|YP_293378.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72123367|gb|AAZ65521.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 286

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 92/303 (30%), Gaps = 28/303 (9%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +  + A G +++ G + + ++     + +G Y  V L           +  +
Sbjct: 9   LNGLTFASVLFLMAAGFTLIFGLMSIPNMAHGALFMLGGYLCVTLVDAELPFSLATLGSA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            ++      +      +   + LA   L    I   I    K I  G         L   
Sbjct: 69  IVVGILGIALERAILRRIAHNELAQV-LATLGIAFVIADSCKTIWGGMPLEIGVPPLLTG 127

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                            + + ++  +V+      + ++ L L RT I    R   +++  
Sbjct: 128 AV-----------SLGELTFPLYRLFVMALSVVTAVALDLSLSRTPIGARLRAAVEDRTM 176

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             ++   +    ++ F   +A +G+ GA  A                 +V+ +V+LGG  
Sbjct: 177 ARAVGIRVDRLFMTIFFAGAALVGIGGAIGAPILSV--SPGLDMEVLPLVLIVVVLGGTG 234

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+      + I   V      +                     L+ + + +V+  R   L
Sbjct: 235 SIPGAMVGSLITGLVHSFGQSV--------------LPEMSYVLLFVPMIVVLAYRPQGL 280

Query: 340 LRL 342
              
Sbjct: 281 FGR 283


>gi|329904370|ref|ZP_08273776.1| Branched-chain amino acid transport protein [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327548016|gb|EGF32754.1| Branched-chain amino acid transport protein [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 287

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 102/303 (33%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +  LIY + A GL+++ G + +++ +       G YS   + S Y L     +P+
Sbjct: 9   LVSGLLIGLIYALVAIGLTMIFGVMDIINFSHGEFLMFGMYSSFWMYSLYALDPMFTLPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+   A G+++    +    +   ++ +  +     +                      
Sbjct: 69  TALFLFALGVVVYKLVISKITNAPMVSQIFTTFGLMLLFRGIAQFLWKPD---------- 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+   +    F  + +          +G   ++  + L++ +T +  A      +++
Sbjct: 119 -FRTIEKSMVSGHFSLAGIQVGTPQLTAGVGAILVTVGVYLFITKTRLGAALEATAADKE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +          A+ + +A  G+AG   +            F    I   +V LGG 
Sbjct: 178 AARLMGIDSQKMFALAWGIGAACAGVAGGLLSTFFPIFPDVGANFIL--IAFVVVNLGGF 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++  +  +   +                     ++++    V++ R   
Sbjct: 236 GSIVGALVAGILVGVIEVMGGFLLG-------------PQYKLAIVLVLFLAVLMFRPQG 282

Query: 339 LLR 341
           L+ 
Sbjct: 283 LMG 285


>gi|251778576|ref|ZP_04821496.1| ribose transport system permease protein RbsC [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243082891|gb|EES48781.1| ribose transport system permease protein RbsC [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 311

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 47/330 (14%), Positives = 92/330 (27%), Gaps = 30/330 (9%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F   L KY  I+ L+ +    ++     +  +   I ++  Q+    + A G++ V+   
Sbjct: 5   FKQNLVKYKSIIGLVLLCT--IITFVTPSFLTISNITNVFTQVSTNAIIAVGMTFVI-LT 61

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+     AI       +    G     +I  + +      +   L S         
Sbjct: 62  GGIDLSVGSTLAISGALAASIIKSTGNVFLAVIVAALVGIAVGFVNGMLISKGKLQ---- 117

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
                       + I          G  ++             I F   P    I    +
Sbjct: 118 ----AFIVTLATMTIFRGLTLVFTNGTPISKLPETFVKIGNGKIGFMPIPVIITIVIAIV 173

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
              LL              +T        +  N+ +           K  A+ +S     
Sbjct: 174 AIYLL-------------NKTRFGRYLYALGGNEDSARLSGINTDKIKTLAYVISGFASA 220

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           +AG    +     SP+       +  I+ V++GG              I    +   +  
Sbjct: 221 IAGVIITSRIASASPNA-GTGFELDAIAAVVIGGT-----SLAGGEGKISGTIIGALIIG 274

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
              N L   + S   +     ++ L  V+L
Sbjct: 275 ILNNGLNLMNVSPFYQSIVKGLVILMAVLL 304


>gi|84502254|ref|ZP_01000402.1| inner-membrane translocator [Oceanicola batsensis HTCC2597]
 gi|84389614|gb|EAQ02333.1| inner-membrane translocator [Oceanicola batsensis HTCC2597]
          Length = 330

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 45/340 (13%), Positives = 103/340 (30%), Gaps = 16/340 (4%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M   S    +   +  L  ++  +   L    +       +     ++  + A GLS+V 
Sbjct: 1   MDAISNTFERLGGVNLLPILLAAVAFVLIGAPSSWVTLTVAGLAMGMMVFLMASGLSLVF 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G + +L+       + GA+    + +     +         ++        +      G 
Sbjct: 61  GLMDVLNFGHSAFVSFGAFVAATVLAGLSGWLASDSVALGSLALILAFTAAILFGLVAGW 120

Query: 121 YLAIATL-IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           +     +  +       ++             +A       +  R       +    V  
Sbjct: 121 FFETVIIRPVYRDHLRQILITMGAMIVAEQTILAFWGGTPFSVPRPSFLEGAWIIGDVSI 180

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
           EI+  +  +    +   +   L RT I    R   ++++   +L   I    +  F + S
Sbjct: 181 EIYRGFAFVLGLIVFVGLYFVLNRTRIGLLVRAGVEDREMVEALGFRIDRLFIGVFMLGS 240

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A   + GA +A     I+         IIV  +VI+GG+ S+        ++  +     
Sbjct: 241 ALAALGGAMWAGYETLIT-PALGAELMIIVFIVVIIGGLGSIEGTLLGALLVGLMSNYLG 299

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
            +      +                 I +  ++L R + L
Sbjct: 300 FLAPKMALASNM--------------ILMVAILLWRPNGL 325


>gi|118593173|ref|ZP_01550559.1| ABC sugar (ribose) transporter, inner membrane subunit [Stappia
           aggregata IAM 12614]
 gi|118434258|gb|EAV40913.1| ABC sugar (ribose) transporter, inner membrane subunit [Stappia
           aggregata IAM 12614]
          Length = 338

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/289 (11%), Positives = 83/289 (28%), Gaps = 18/289 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++  ++ FL   A  S+  + ++  +     + A G + V+ + G + L+     A
Sbjct: 26  AVALLILCIIGFLLNPAFVSEGNLTNLLTRSAFIGIIAVGATFVI-TAGGIDLSVGSMAA 84

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             +   +I+ +    ++   +P   +  G   ++                          
Sbjct: 85  AISGVMIIIMNNAVETMGSGVPTVLLGCGLAIVLGIGAGWVNGALTTKGKIEAFIVTLGT 144

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + I    +T    G  ++      GT          +  +F+     ++  +        
Sbjct: 145 MGIYRSLVTYFADGGTLSLNFDIRGTYRP------VYYDTFLGLPFPVWVFIAVAICGWL 198

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +     RTA       I  N+         +   K   + +    +  A   +      
Sbjct: 199 LL----NRTAFGRYCTAIGSNEAVARYSAINVDRVKTLTYVIQGLCVSFATIIYVPRLGS 254

Query: 256 ISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELC 298
            S         +  I+ VI+GG         +        IL  +  + 
Sbjct: 255 ASA-STGVLWELEAIAAVIIGGTVLKGGYGRIGGTILGALILTTIGNIL 302


>gi|322835447|ref|YP_004215473.1| inner-membrane translocator [Rahnella sp. Y9602]
 gi|321170648|gb|ADW76346.1| inner-membrane translocator [Rahnella sp. Y9602]
          Length = 337

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 94/320 (29%), Gaps = 23/320 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L   + +L ++ V+  L + +          +  M     I ++ A G  +V+     + 
Sbjct: 6   LKYRELLLAVVIVLMVLGVGVRSPEFIGAGNLLEMFNDTSILIILALGQMMVL-LTKGID 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+      ++   +       + + A + G     +    +   G    + TL
Sbjct: 65  LSMAANLALTGMIVALINFHHPDIPVWSLVLLATVLGLVMGAINGLLVWKVGIPPIVVTL 124

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I++ I+                  L   G  + +      F S      I +  + 
Sbjct: 125 GTMSIYRGIIF-----------------LLSNGGWINAHQMSPEFLSLPRATFIGLPLLG 167

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                    +  +LR +    A  T   N  A +         +  +F +S A  G  G 
Sbjct: 168 WCAIAALILVAYFLRYSRTGRALYTAGGNATAAYYTGINAGKMQFVSFCLSGALAGFCGY 227

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
            + +       D+    E  IV + VI     +GG+ S+         L  +      + 
Sbjct: 228 LWISRFAVAYVDVANGFELQIVAACVIGGISTMGGIGSVVGCLLGALFLGVINNALPVIE 287

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F  +        +    
Sbjct: 288 VSPFWQMAISGGVIVIAVIL 307


>gi|299531989|ref|ZP_07045388.1| inner-membrane translocator [Comamonas testosteroni S44]
 gi|298720025|gb|EFI60983.1| inner-membrane translocator [Comamonas testosteroni S44]
          Length = 289

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 89/303 (29%), Gaps = 24/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GL++  G   +++L+        A+   I+       +W L+  
Sbjct: 7   LLTGATLGGLYALVAMGLTLQYGVARIMNLSYGEFLIGAAFIAWIVSKLGLSPLWGLLLA 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +  G   ++  +  +       A   L +  I     + +         +     L F
Sbjct: 67  VPLGFGVQWLVYRVLMVPLVKRTGAGPQLEVDSILATFGLLFI--------VQGLMLLQF 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                         VL      +A + L L RT +  + R +  + +
Sbjct: 119 TGNYHSYSYLAEPVQILGGTVAANRLLVLCVAAAAAAGLFLLLNRTRVGTSVRAVAVSPQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +      A+ +  A + + G   +                +  + +VI+GG+
Sbjct: 179 FAPLVGINVRQRAAQAYGLGGALVAVCGVLVSMFLPF--SATMGIMFTMKALIVVIMGGV 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L     A  +L     +   +                     +      LV+L+R   
Sbjct: 237 GNLMGALVAGLLLGFAETIVASIEPALI--------------LAVNYGLFLLVLLVRPTG 282

Query: 339 LLR 341
           L  
Sbjct: 283 LFG 285


>gi|288932494|ref|YP_003436554.1| branched-chain amino acid ABC transporter permease [Ferroglobus
           placidus DSM 10642]
 gi|288894742|gb|ADC66279.1| inner-membrane translocator [Ferroglobus placidus DSM 10642]
          Length = 303

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 93/296 (31%), Gaps = 14/296 (4%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           + V+ +  L+I   +  + +         G+Y        + +  +  IP+  ++ G  G
Sbjct: 13  LLVLLSMSLTITYITTSVPNFAQGSFAVFGSYLAFAFFKLFEIHPYKSIPLVFILGGFLG 72

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +      L+      A   ++M       LI    +      +      Y          
Sbjct: 73  IATYFLVLRPLIKKEASVLILMIATLAWDLILLGFLGIFSETLGKIIGGYASRFIFTPYD 132

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                 +           + L        + +   +T    A R   +N +    +   +
Sbjct: 133 FRAFGMNGIFFVSSAAIILCL------FGLAVLFYKTKFGIALRASMENPQLAEVMGVNV 186

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
            + ++ ++ +S +F  +AGA     ++ +          + + +  I+GG++S+      
Sbjct: 187 EYTRIFSWFLSGSFSALAGALLPFKQEIVQ--STGALIIVSIFAASIVGGLSSILGAILG 244

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
             ++     L              F     +    + ++ L +V+L     L+ +R
Sbjct: 245 GYLIGISETLVTFYLSKL------FGTGVLVYSKLVPLVILIVVLLYIPQGLVSIR 294


>gi|37521299|ref|NP_924676.1| sugar transporter permease protein [Gloeobacter violaceus PCC 7421]
 gi|35212296|dbj|BAC89671.1| glr1730 [Gloeobacter violaceus PCC 7421]
          Length = 326

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 95/312 (30%), Gaps = 30/312 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++  ++         + +   ++ +Q  I+ + A G+++V+   G + L+     A
Sbjct: 31  AIAVLIEIVVFSAIAPGFFTLENFINISLQTAIFGILAVGMTLVI-LTGGIDLSVGSVVA 89

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   S  ++    GL + + I V   +    G+++          Y  +A  +++     
Sbjct: 90  LAGVSGAMVAQAGGLGMPVAIVVGGGVGLLSGLLV---------AYFRVAPFVVTLAGLT 140

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I      +  G   I      +      +  +         V+     + +         
Sbjct: 141 IARGLAFLLTGGRSIGGLPPDFTFWGQKQLGLLPLPVLVLMVVVTGGYFLL--------- 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  RT        I  N +A +     +    ++ + ++    G+AG   AA    
Sbjct: 192 ------TRTVFGRQIYAIGGNAEASWLAGVPVQGVLVAVYLINGLLAGLAGGMLAARLGA 245

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P+  +  E  ++ ++V+      GG   +         +  +      +    +   +
Sbjct: 246 GIPNSGQLYELEVIAAVVVGGTSLSGGRGGVLGSLLGALFIGTLGNGLNLLGVDPYLQKI 305

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 306 VLGVVILAAVLV 317


>gi|23015869|ref|ZP_00055634.1| COG0559: Branched-chain amino acid ABC-type transport system,
           permease components [Magnetospirillum magnetotacticum
           MS-1]
          Length = 291

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 79/307 (25%), Gaps = 27/307 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ S      IY +   G +I+  +  +++        IG  +   + +        + 
Sbjct: 7   QYLFSGLTSGAIYALAGLGFAIIYNASHVINFAQGEFIMIGGMATATMVAAGVPVYLAIP 66

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A        +        R   +    +I       +    + I             
Sbjct: 67  LAMAASMLVGVAMEKFAIEPARNSDVVTIIIITIGASIFLRGAAQIIW------------ 114

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                ++ +                   +V        A +  +  RT    A      N
Sbjct: 115 DKEFHSLPAFSGETPIAVLGATLMPQSLWVFGISAVAIALLWYFFNRTMFGKAMLGTSHN 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +    L++FA+S+    + G          +         +   S  +LG
Sbjct: 175 RLAAQLVGVAVKKVLLASFALSALLGAVGGIVVTP--ITFTNYEAGIMLGLKGFSAAVLG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ + +       I+     +  G     +   + F             I +  V+    
Sbjct: 233 GLGNGTGAIVGGLIVGIAEAMASGYLSSAYKDAIAF-------------IIILFVLFFMP 279

Query: 337 HSLLRLR 343
             L   R
Sbjct: 280 SGLFGKR 286


>gi|318042030|ref|ZP_07973986.1| permease protein of branched-chain amino acid ABC transporter
           [Synechococcus sp. CB0101]
          Length = 287

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 59/307 (19%), Positives = 115/307 (37%), Gaps = 44/307 (14%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI---- 96
            + +Q+++  +    + + +   G LSL     YA+G     +L ++ G    + +    
Sbjct: 5   GLLVQMILGALLGLSVYLPMA-AGQLSLATPAFYAVGGTLAALLATQGGPQAGISLGAVL 63

Query: 97  ---PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
               ++A ++ A  +++GLP L+ RG YLAIAT+ + EI +  ++     T G  GI+  
Sbjct: 64  GEMLLAAALTAALAVLVGLPVLRLRGIYLAIATIALVEIVRVAILNLP-FTGGATGIFGI 122

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            + +                           ++  G+  L   +   L  + +  +   +
Sbjct: 123 PQPFRH--------------------PFGYVWLSGGLLALCGWLFQRLEASRLGRSMAAV 162

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           RD++ A   +       KLSAF  S+   G+ G   A   +  +     F   I  ++ V
Sbjct: 163 RDDELASRCMGINTTRVKLSAFVASAMLAGVTGVIAAHYLNTWNARQGSFDVAITTLAFV 222

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ILGG  S      +  +L  + EL                         L  + + L  +
Sbjct: 223 ILGGSRSWLGPVVSGLLLTALPELLR---------------PVGDLRLVLFGLVILLGPV 267

Query: 334 MRSHSLL 340
           +    L+
Sbjct: 268 LFPQGLI 274


>gi|167031680|ref|YP_001666911.1| inner-membrane translocator [Pseudomonas putida GB-1]
 gi|166858168|gb|ABY96575.1| inner-membrane translocator [Pseudomonas putida GB-1]
          Length = 286

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 102/304 (33%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     +IY + A GL+I+ G L  ++      + +GAY           + WL + +
Sbjct: 9   LLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCY-TAVAITGNFWLALLI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++  A    +    +K          ++++     I+ +   +  G  G  +A     
Sbjct: 68  APLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGPVGKNIAVPPEL 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                 IY  +  +++     +   + L L RT      R   ++ +
Sbjct: 128 RGV----------LILGDFIYPYYRLFLIGFAALIGVGLWLLLERTRFGALVRAGSESTE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L T I       FA+     G+AG  FA  R              I   +V++GGM
Sbjct: 178 TVSLLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGA--QPFVGPEILGIAFVVVVIGGM 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         ++  V  +   +              +    + ++  A+  VIL+R + 
Sbjct: 236 GSFGGALVGGLLVGVVQSMMTSL--------------WPQGASLMIYGAMAAVILVRPYG 281

Query: 339 LLRL 342
           L   
Sbjct: 282 LFGR 285


>gi|91774511|ref|YP_544267.1| inner-membrane translocator [Methylobacillus flagellatus KT]
 gi|91708498|gb|ABE48426.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Methylobacillus flagellatus KT]
          Length = 295

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 86/291 (29%), Gaps = 11/291 (3%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      IY   A G+SI   SLGL++++    +A   Y   ++         ++I   
Sbjct: 10  ITAVTLACIYGTLAIGVSITWSSLGLINMSYGFTFATAGYGAWLVSEYISSLGPVVILGG 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +     G+++   +     D        +       LI  + +              F 
Sbjct: 70  ILTGALVGVLVCAVAFIPIHDKPNFTVRGLIASLALSLIGTQALLYFFGPQSKTLPPLFG 129

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                     +      V+        +L    +    + WLR +      R +  N  A
Sbjct: 130 D---------WELELGEVVLTADKGGAILTSILMLTLALWWLRSSRRGLEIRAMMMNPHA 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +        A++    G+A    + +           +  I  +S+ + GG+ 
Sbjct: 181 ASLVGIGVRRTGFYVMALTGGLAGLASVLLSQTYFV--SPFSGVTPLIKGLSVALCGGLG 238

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           S+     A  ++     L   +    +  + +F     +       IA  L
Sbjct: 239 SVGGAMIAAVMIGVNEALTADILGGQYILITQFLLIILVLIIRPRGIAGIL 289


>gi|296532437|ref|ZP_06895162.1| ABC superfamily ATP binding cassette transporter permease
           [Roseomonas cervicalis ATCC 49957]
 gi|296267233|gb|EFH13133.1| ABC superfamily ATP binding cassette transporter permease
           [Roseomonas cervicalis ATCC 49957]
          Length = 291

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 92/305 (30%), Gaps = 28/305 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +    Y++ A GLS++    G+++L     YAIGAY  V       +       V
Sbjct: 10  ILNGLLIGAYYLLIALGLSLIFSLGGIVNLAHGAFYAIGAYLTV--ALAPHIGFGGAFVV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G+++    L+       I +L+++     +  +   +  G   +  +  +  
Sbjct: 68  APVLVALLGLVIERFLLRRFYRADPILSLLLTFGLAMVAEQSLRMIFGAPPLPFSIPVEL 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                 IY  +   +L         +   L+RT      R    N  
Sbjct: 128 RGQVF----------IGEFIYSRYRLMILAVAAICVLGLWFLLQRTHFGRVVRAGVQNPD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L  ++     +   ++     +AG   A                     +V++GG+
Sbjct: 178 MVGALGISLKPYMSAVVMIAVGLAALAGVMLAPVIGV--HPAMGAEILTFAFVVVVIGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S   +  A  I+  V  +          + +       +                R   
Sbjct: 236 GSFWGVVVAALIVGVVRGIAAYAFPPATEASVYLLMLLVLLL--------------RPRG 281

Query: 339 LLRLR 343
           L   R
Sbjct: 282 LFGER 286


>gi|269955683|ref|YP_003325472.1| Monosaccharide-transporting ATPase [Xylanimonas cellulosilytica DSM
           15894]
 gi|269304364|gb|ACZ29914.1| Monosaccharide-transporting ATPase [Xylanimonas cellulosilytica DSM
           15894]
          Length = 363

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 94/301 (31%), Gaps = 24/301 (7%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            +  G   S+     + +   I V+ A G ++VV     + L+      + AY    L +
Sbjct: 36  LVQPGFLVSRSGWRDLLLTPAILVVLAVGQAMVV-FTRNIDLSVGSVLGLTAYLTGRLFA 94

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL I +++ V+ +     G++ G      R   L + TL     ++ +++ W      
Sbjct: 95  DGGLPIPVVVLVTVLAGAVLGLVNGAVVAFARVPAL-VVTLGTMYAYRGVVLTWAG---- 149

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                           + +      F +        +  + +    + A    ++  +  
Sbjct: 150 -------------SDRIDADEMPRAFGALGTRQVATIPVLAIVAVVVLAVAAWFMHTSRA 196

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE- 265
                 I  +  A       +    L  F VS A  G+ GA FAA    +S       E 
Sbjct: 197 GRQLYAIGSDPDAAHLHGLPVARRVLWVFVVSGALAGLGGAMFAARYGTVSSGAGSGLEL 256

Query: 266 ----NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
                ++V  + I GG  ++   A    +L+ +      +    F               
Sbjct: 257 QVVGAVVVGGVAIFGGSGTVVGAAIGAVLLLTINRALPVVGVPDFWQRAVVGVLILSAIV 316

Query: 322 T 322
            
Sbjct: 317 L 317


>gi|222102154|ref|YP_002546744.1| ABC transporter permease protein [Agrobacterium radiobacter K84]
 gi|221728271|gb|ACM31280.1| ABC transporter permease protein [Agrobacterium radiobacter K84]
          Length = 280

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 87/303 (28%), Gaps = 29/303 (9%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            ++G  +L+  +   GL++ +G LG+L++       +GAY  + +          +    
Sbjct: 6   LNLGYDVLVLAILTLGLAVSMGLLGVLNIAHGEMVMVGAYCGLSVQHLELSYFLAVPLAF 65

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +      +   L     + D  A                      G A   +   L+  
Sbjct: 66  VVCGALGFLAERLIIRPLKYDGFATL--------------LGTWGLGMAIREIVKLLWGN 111

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G     L            +  +  +V+     +   + +W  RT+ +   R +  N   
Sbjct: 112 GYQSVDLPIAGTVNLFGSTFPGWRLFVMSCAFLVLVFVAIWYLRTSTALRIRAMVSNPVL 171

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             ++           F  SSA  G+AG   A +              +     +++GG  
Sbjct: 172 AQAVGINSSRLSTQTFVFSSAAAGIAGVLIAPTVPV--EPSMGILLVVNSFFSLVVGGYG 229

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           +++ +      + G   +                         +++    + +  R   L
Sbjct: 230 TIAGLLSGAVAIGGSQSILAT-------------QLSPSMAYLVVLAIAIIFLWRRPRGL 276

Query: 340 LRL 342
              
Sbjct: 277 FSR 279


>gi|187934522|ref|YP_001885724.1| ribose transport system permease protein RbsC [Clostridium
           botulinum B str. Eklund 17B]
 gi|187722675|gb|ACD23896.1| ribose transport system permease protein RbsC [Clostridium
           botulinum B str. Eklund 17B]
          Length = 311

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 48/330 (14%), Positives = 93/330 (28%), Gaps = 30/330 (9%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F   L KY  I+ L  V+  +++     +  +   I ++  Q+    + A G++ V+   
Sbjct: 5   FKQNLVKYKSIIGL--VLLCMIITFVTPSFLTISNITNVFTQVSTNAIIAVGMTFVI-LT 61

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+     AI       +    G     +I  + +      +   L S         
Sbjct: 62  GGIDLSVGSTLAISGALAASIIKSTGNVFLAVIVAALVGIAVGFVNGMLISKGKLQ---- 117

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
                       + I          G  ++             I F   P    I    +
Sbjct: 118 ----AFIVTLATMTIFRGLTLVFTNGTPISKLPETFVKIGNGKIGFMPIPVIITIVIAIV 173

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
              LL              +T        +  N+ +           K  A+ +S     
Sbjct: 174 AIYLL-------------NKTRFGRYLYALGGNEDSARLSGINTDKIKTLAYVISGFASA 220

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           +AG    +     SP+       +  I+ V++GG              I    +   +  
Sbjct: 221 IAGVIITSRIASASPNA-GTGFELDAIAAVVIGGT-----SLAGGEGKISGTIIGALIIG 274

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
              N L   + S   +     ++ L  V+L
Sbjct: 275 ILNNGLNLMNVSPFYQSIVKGLVILMAVLL 304


>gi|327193529|gb|EGE60421.1| putative branched-chain amino acid ABC transporter, permease
           protein [Rhizobium etli CNPAF512]
          Length = 345

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 52/309 (16%), Positives = 109/309 (35%), Gaps = 34/309 (11%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
              + IYV+ A   + + G  GL+S+   + + +GAY   I  +  GL  +L +  +A++
Sbjct: 50  MTALFIYVVLAAMWNALAGFGGLVSVGQQVFFGLGAYFT-IRLADAGLDPFLSVFAAAVV 108

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +GA  + + L  L+ +G   AI   ++     ++L+    +  G+ G  +     +    
Sbjct: 109 TGALSIPLSLFMLRLKGGEFAIGMWVV-AELVHLLVNLDRLIQGETGTSLISLNLYDSGM 167

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
            R                  +Y++ L         +  L R+    A + IRDN++A  S
Sbjct: 168 RR----------------AAIYWLALASMAALLGALFMLMRSRAGAAMQAIRDNEEAATS 211

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFF-AASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           +   +   K   F +++  I +AG  + A +        F       +I +V++GG+   
Sbjct: 212 VGVRVTATKRLLFVLAAFGIAVAGGLWLATATTFQPKTYFSVQWTAYMIFMVLVGGIGKF 271

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +   +     G                 + +   +     +  L     L  
Sbjct: 272 EGAILGAILFFVIETFFGG---------------TGVWYLIGLGATALIFSLYLPRGLWG 316

Query: 342 LRTPSNFLE 350
                   +
Sbjct: 317 EIERRFDFQ 325


>gi|296137603|ref|YP_003644845.1| inner-membrane translocator [Thiomonas intermedia K12]
 gi|294341961|emb|CAZ90390.1| putative High-affinity branched-chain amino acid transport system
           permease protein livH [Thiomonas sp. 3As]
 gi|295797725|gb|ADG32515.1| inner-membrane translocator [Thiomonas intermedia K12]
          Length = 301

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 96/305 (31%), Gaps = 17/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A G ++V G L L++         GAY  ++       +       
Sbjct: 9   IVNGLTVGGIYALIALGYTMVYGILKLINFAHGDLCIFGAYIGLVALGMGAGT---GQSH 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +++GA  +   +  +            +      + ++     +       +      
Sbjct: 66  LFLLAGAFILAAVVVGVAGLVLEFTAYRPLRKADRLSAVVSALGASLFIENGIMIIWGPQ 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L     +L+    +  +    ++    ++LG   L A +  ++  T    A R    +Q 
Sbjct: 126 LRVFPSNLLPAMHWEFAGARIDLIQVLIMLGSALLMALLYWFVHHTRFGTAMRASASDQD 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +     S F +  A   + G F      ++   M  ++  +      I+GG+
Sbjct: 186 AARLMGINVNRVIASVFVIGPAIGAIGGLFIGLYYRQVYFTM-GWNYGLSAFIAAIIGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L     L  G     +   + F               L  ++L+R   
Sbjct: 245 GNIPGAMLGGVLLGLFNALAAGFISSSWQEAITF-------------ALLIGILLVRPTG 291

Query: 339 LLRLR 343
           LL  R
Sbjct: 292 LLGER 296


>gi|218663011|ref|ZP_03518941.1| probable branched-chain amino acid ABC transporter, permease
           protein [Rhizobium etli IE4771]
          Length = 265

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 102/235 (43%), Gaps = 14/235 (5%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
             +++L + +FA   ++++G  GLLS      +   AY        +GL   L I +  +
Sbjct: 45  FLMKLLCFALFACAFNLLLGYTGLLSFGHATFFGGAAYFTAYTVKSWGLPPELGILIGVV 104

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
            +   G++MG  +++ +G Y A+ TL +S++F    ++ +                    
Sbjct: 105 GAAFLGLVMGFFAIRRQGIYFAMITLALSQMFFFFCLQAEFTEG--------------ED 150

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            ++S+ R   F    +     MYY +L +  +   II     +      ++IR+N+    
Sbjct: 151 GIQSVPRGHLFGFIDLSNSTNMYYFVLAVFLVGILIIWRFINSPFGMILKSIRENENRAI 210

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           SL  ++   KL AF +S+A  G+AGA  +      +     +  +  VI + +LG
Sbjct: 211 SLGYSVARYKLGAFVMSAALAGLAGAMKSLVFQFATLTDVAWQMSGEVILMTLLG 265


>gi|167043558|gb|ABZ08253.1| putative branched-chain amino acid transport system / permease
           component [uncultured marine microorganism
           HF4000_APKG2K17]
          Length = 344

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 100/316 (31%), Gaps = 15/316 (4%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             IL L+A++  +L  L      + + + ++  Q       A G+ IV+ + G + L+  
Sbjct: 28  YGILLLIALMMIILHILQPDVFFTWRNLTNVFKQTAWQATLALGMFIVIVTAG-IDLSVG 86

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               +   S  I+         +++    +      +  G+   K R  +  I TL    
Sbjct: 87  SILMLSLMSLAIVSKAGFPWFVVMVVPIVVGIICGCI-NGIGITKLRMPHPFIMTLGTLY 145

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +F+ +            G+ ++     +       I+      S     I +  + + + 
Sbjct: 146 LFRGVGNLI------SGGVPISGFSEQVNFLGSGRIKLEWLLGSGAREYIPVSLIFVIIM 199

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           +L     L    T        I  N  A  ++   +    +  + +     G A    A 
Sbjct: 200 YLVVWFYL--EHTQHGRWIFGIGGNPNAARAVGINVDNMLILVYTICGGLAGFAALILAG 257

Query: 252 SRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             +   P+    SE   + +++I      GG  ++  +     ++  +      M+   F
Sbjct: 258 RTNSGYPNAGLQSELDAIAAVIIGGASFFGGRGTVIGVFSGVFLMGLLRNGLNLMDVSVF 317

Query: 307 NSLLKFDCSFNMRHTT 322
              +       +    
Sbjct: 318 WQQITIGVIIIIAVYL 333


>gi|167769096|ref|ZP_02441149.1| hypothetical protein ANACOL_00419 [Anaerotruncus colihominis DSM
           17241]
 gi|167668736|gb|EDS12866.1| hypothetical protein ANACOL_00419 [Anaerotruncus colihominis DSM
           17241]
          Length = 328

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/322 (10%), Positives = 91/322 (28%), Gaps = 21/322 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LR    +  + L  +V  +   LF+    +   + ++ IQI I  + A G++ V+     
Sbjct: 17  LRKFAKEYTMLLFVIVLVIACMLFVDRFATPGNLMNVLIQIAINALIATGMTFVI-LSDG 75

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+           +  +   L  +  +++      +      F    L + 
Sbjct: 76  IDLSVGSVAALAGVVATATIKMFPDAGRGLSVLVILLAAIVVGGICGSINAFSVAKLNVP 135

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
             I +    NI      +      ++                    +    +     +  
Sbjct: 136 PFIATLAMMNIARGLAFVYTDSKPVFDLP---------------DSYGWVGLRSIGSIPV 180

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            ++ M  + A+  + L RT        +  N +        +   K   + +      + 
Sbjct: 181 TVIVMIIVLAAAYIILSRTCFGRYIYAVGSNAEVAKLSGINVKKIKYLVYIICGILAALG 240

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCG 300
           G   ++      P+  +  E   + ++      + GG   + +       +  +      
Sbjct: 241 GVVLSSKLQSGQPNAAQSYELNAIAAVAMGGTSMSGGRGGIIQTIFGLVAIGVINNALSL 300

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +    +   +       +    
Sbjct: 301 LGVSSYWQTITLGVIILIAVVI 322


>gi|51597885|ref|YP_072076.1| ABC sugar transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|186897082|ref|YP_001874194.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
 gi|51591167|emb|CAH22832.1| ABC sugar transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|186700108|gb|ACC90737.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
          Length = 329

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 82/292 (28%), Gaps = 20/292 (6%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +   +  +     I  + A GL  VV   G + ++     AI  Y         G 
Sbjct: 33  PEFLTLGNLTDVATSYAILGILACGL-FVVLIAGGIDISFPAVTAIAQYVMASWVITQGG 91

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S  L + ++  +    G+I GL     +      A +I               TNG    
Sbjct: 92  SFTLALVMAMAVGLLLGLINGLLVYWLKV----PAIIITIATLNLFYGLLVYFTNGTWLY 147

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
              D                        Y+  +   LL +        + +  T +    
Sbjct: 148 GFPDWFMTGINWFSFE--------GSDGYDYGLTLPLLCLAGTIIFTGVMMNYTRLGRQI 199

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N+ A   L   I    L  +       G+A    A     ++P+       + V+
Sbjct: 200 FAMGSNKDAASRLGINIFRLHLYVYGYMGILAGVAAVVQAQISQSVAPNSL-MGFELTVL 258

Query: 271 SIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + V+L      GG  SL+       +L  +      ++   +   +      
Sbjct: 259 AAVVLGGTSMSGGRGSLTGTVLGVMLLAFLQNGLTLLSVSSYWHTVFSGVII 310


>gi|16272447|ref|NP_438661.1| ribose ABC transporter permease [Haemophilus influenzae Rd KW20]
 gi|260580434|ref|ZP_05848262.1| ribose/xylose/arabinose/galactoside ABC-type transport system
           [Haemophilus influenzae RdAW]
 gi|1172867|sp|P44736|RBSC_HAEIN RecName: Full=Ribose transport system permease protein rbsC
 gi|1573484|gb|AAC22161.1| D-ribose ABC transporter, permease protein (rbsC) [Haemophilus
           influenzae Rd KW20]
 gi|260092776|gb|EEW76711.1| ribose/xylose/arabinose/galactoside ABC-type transport system
           [Haemophilus influenzae RdAW]
 gi|309750084|gb|ADO80068.1| D-ribose ABC transporter, permease protein [Haemophilus influenzae
           R2866]
          Length = 323

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 88/301 (29%), Gaps = 23/301 (7%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           + +      S   I ++  Q  +  + A G++ V+   G + L+     A+       + 
Sbjct: 31  VSMINPDFFSVDNILNILRQTSVNAIIAVGMTFVILIAG-IDLSVGSVLALTGAIAASMV 89

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           S       ++  V  + +   G+   + +                + F   L+    +  
Sbjct: 90  SIELPIFLVIPVVLLIGTLLGGISGVIVAK------------GKVQAFIATLVTMTLLRG 137

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                     +    +    L     F S    Y + +   +  M  + A     L+ T 
Sbjct: 138 ITMVYTDGRPITTGFSDNADL-----FASIGTGYVLGIPVPIWIMSIVFAVAWYILKDTP 192

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           I      +  N+ A       +   K+  FAVS     +AG    +      P      E
Sbjct: 193 IGRYIYALGGNEAATQLSGINVNKIKVFVFAVSGFLSALAGLIVTSRLSSAQPTAGVSYE 252

Query: 266 NIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              + ++V+     +GG   +        I+  +      ++   +  ++       +  
Sbjct: 253 LDAIAAVVVGGTSLMGGKGRVMGTLIGALIIGFLNNALNLLDISSYYQMIAKALVILVAV 312

Query: 321 T 321
            
Sbjct: 313 L 313


>gi|330837568|ref|YP_004412209.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Spirochaeta coccoides DSM 17374]
 gi|329749471|gb|AEC02827.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Spirochaeta coccoides DSM 17374]
          Length = 340

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 42/330 (12%), Positives = 88/330 (26%), Gaps = 23/330 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            I ++R       +    ++  ++  +      S + I ++  QI   ++   G S V+ 
Sbjct: 13  RILAIRGMGQVITVSAGLIILLIVFGILNPTFFSSRNIGNLLRQIAPILLIGIGQSYVL- 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G + L+      +       L ++     W  + ++ +     G   G+     +   
Sbjct: 72  ITGNIDLSIGSVVGMSCMISATLMTKGMN-PWFAVGLTLIACLLVGASNGMLVSFCKLPP 130

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                  M+       I          G        F                      +
Sbjct: 131 FIATLGTMTIARGIAQIANNNYNTDSIGEAARGFRNFFYY----------------GRTL 174

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +Y  +     L       L RT        +  N +A       ++     A+ +S+  
Sbjct: 175 GLYNTIWITVVLWLIFNFVLSRTRTGRHTYAVGSNIEAARLSGVNVLVTTTKAYVISAFL 234

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+ G    A+    S D     E   V + VI     LGG   L       +I   +  
Sbjct: 235 AGVVGLVITATSGMGSMDAGNSYEMYAVAASVIGGVSTLGGQGILLGTVIGASIWGVLQN 294

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
                        +       +     +++
Sbjct: 295 GLQFAGAPVAIRNIVIGIIVVVSVLLDVIV 324


>gi|296162346|ref|ZP_06845139.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295887379|gb|EFG67204.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 289

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 79/282 (28%), Gaps = 17/282 (6%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
               V+ A GL+++ G +G+++L        GAY  +I           ++  +   + A
Sbjct: 18  FAYLVLAALGLAVIFGMMGVINLAHGEFIMCGAYVTIITAKHGAPLPLAMLLGALAAALA 77

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
             +I  L               + +     I+ +   +  G +   ++           S
Sbjct: 78  GVIIERLVIRHLYDRLFDSV--VATWAISLIVQQTMLLVAGPSIEGISTPFGSFSLGEYS 135

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
              +        +  +F  Y+L               +T      R    N      L  
Sbjct: 136 FSTYRAVLPGIALAILFSLYLLFF-------------KTNYGVCARATIQNANIAQCLGL 182

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                    FA+ +   G+ GA +A +   +      F         V++GG   ++   
Sbjct: 183 RTDRLYTLTFALGAGLAGLTGALYAPTMTAVPTMGSNFIVQ--AFVSVVVGGANVIAGTT 240

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            A  +L  +           F  +        +       + 
Sbjct: 241 PAAGVLAIIQTALTASYGQLFGQIGLLVTVIVVIRLMPQGLG 282


>gi|255323883|ref|ZP_05365009.1| ABC transporter, carbohydrate uptake transporter-2 family, permease
           protein [Corynebacterium tuberculostearicum SK141]
 gi|255299063|gb|EET78354.1| ABC transporter, carbohydrate uptake transporter-2 family, permease
           protein [Corynebacterium tuberculostearicum SK141]
          Length = 313

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 98/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  +   + LF+      +   + ++GIQ     + A+G++ V+ + G + L+     
Sbjct: 15  ALVGLIALCIALFIATPYFLTVANLLNIGIQAATVAILAFGMTFVIVTAG-IDLSVGSVA 73

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GA     + S  GL  WL + +  ++    G I G+ +   +                
Sbjct: 74  ALGAMVSAYMFSTAGLPGWLTLLLGLVVGALAGAICGMATAWGKIPSFI----------- 122

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  S I      ++F          ++ M    
Sbjct: 123 -----------ATLAMMSIARGLTLVISQGSPIETAPSVNAFGGDIAGFPVPIIMMVIAG 171

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N +A       +   +++ FA+S  F   AG   A   +
Sbjct: 172 LICWFILERTVLGRSMYAIGGNLEAARLSGLPVKRIQIAVFALSGFFAAWAGMVMAGRLE 231

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG    +       +L  +      +N   F   
Sbjct: 232 SAQPQAGTGYELDAIAAVVIGGASLSGGQGKATGTLVGAILLAVIRNGLNLLNVSSFWQQ 291

Query: 310 LKFDCSFNMR 319
           +       + 
Sbjct: 292 IVIGLVIALA 301


>gi|157363223|ref|YP_001469990.1| monosaccharide-transporting ATPase [Thermotoga lettingae TMO]
 gi|157313827|gb|ABV32926.1| Monosaccharide-transporting ATPase [Thermotoga lettingae TMO]
          Length = 326

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 42/297 (14%), Positives = 83/297 (27%), Gaps = 27/297 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL-LSLNCVIAY 74
            +  +   +   +      +   + ++G QI I+ + A G + V+ S G  + L+     
Sbjct: 25  LVALMSLAIFTTVLNPRFLTAFNLQALGRQIAIFGLLAIGETFVIISGGGAIDLSPGSVV 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       L +        L  +     G         +                    
Sbjct: 85  ALTGVMVAWLMTHGVSVWISLFLILLFSLGIGAWHGVFVTKLKVP--------AFIITLG 136

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + I          G  V +         ++       P             +  +  ++
Sbjct: 137 TLTIARGMAAVITRGWPVINLPSSFLKIGQADFLKIPVP-------------VWILIGVT 183

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                +LR+T      R    N+ A       +   +  AF VS    G+ G   AA   
Sbjct: 184 LIADFFLRKTVYGKHLRASGGNEIAARFSGVNVDAVRTIAFMVSGFLAGLVGVIVAARLS 243

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +  P +    E   + S VI      GG  S+       +I+  +      +N   +
Sbjct: 244 QGQPGVGSMYELYAIASTVIGGTSLTGGEGSVLGAIIGASIISLLWNALVLLNVSTY 300


>gi|119961146|ref|YP_946341.1| sugar ABC transporter permease [Arthrobacter aurescens TC1]
 gi|119948005|gb|ABM06916.1| putative sugar ABC transporter, permease protein [Arthrobacter
           aurescens TC1]
          Length = 465

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 41/356 (11%), Positives = 85/356 (23%), Gaps = 56/356 (15%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F     +   I   L ++  L   L  G     + + ++ +Q    ++ A G+ +V+   
Sbjct: 48  FLTSRLRQVGIFVALILIVILFQVLTDGILLQPQNVTNLVVQNSYILILAIGMVMVI-IA 106

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+             ++   +G + WL IP   ++    G   G            
Sbjct: 107 GHIDLSVGSIAGFIGAVAGVMIVHWGWAWWLAIPACLLVGALVGAWQGYWIAYVGIPAFI 166

Query: 124 IATLIMSEIFQNILIK--------------------------------WKPITNGKAGIY 151
           +    M       LI                                 W  +  G  G  
Sbjct: 167 VTLAGMLIFRGLTLITLKNQQITPFPNELRALGGGFLPDISGGTSVLEWLTVILGVGGTA 226

Query: 152 VA------------------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
                               + + +       +       +  +        VL+ +  L
Sbjct: 227 AILFQAIKERRVRRKFNLENEPMAWFAVKNGFIAVLMLIITFLLASYRGTPIVLIVLAVL 286

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
                  +  +        I  N  A               F        +AG  F A  
Sbjct: 287 VIVYSALMNNSIFGRHTYAIGGNLHAAELSGIKTKKVTFRLFVNMGVLAALAGLVFTARL 346

Query: 254 DRISPDMFKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           +   P      E        +    + GG+ +++       I+  +      +   
Sbjct: 347 NSAQPAGGTGFELDSIAAAFIGGAAVQGGIGTVAGAMIGGLIMGVLNNGMSILGLG 402


>gi|319777975|ref|YP_004134405.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317171694|gb|ADV15231.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 303

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 90/304 (29%), Gaps = 16/304 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I    Y + A G S+V G + LL+      Y  GA+  +I+ S  G+ +      
Sbjct: 10  LVNGLIVGSFYALIALGYSMVFGVIKLLNFAHGDIYMNGAFVGLIVFSFVGIWVGNGWLG 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                    +++GL  +                      +    + NG A      R   
Sbjct: 70  VVCALLVSMLVVGLLGVVIERFAYRPMRNAPRLSILITALGASMVLNGTALALTGGR--- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 + + F     S V        ++     L A +  ++ RT    A R +  +  
Sbjct: 127 -HYAFNTDLGFAGIDISTVHITYTQMVLVAASIALMAGMQAFVSRTMYGKAMRAVSIDMG 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       F + SA     G    A    +   M  F   +   +  ++GG+
Sbjct: 186 ASRLMGIDVDRVIALTFFMGSALAAGGGVMAGAYYGSVHFFM-GFIMGLKAFTAAVIGGI 244

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L  +      +               +      +   L L ++ +   
Sbjct: 245 GSVPGAMLGGLLLGLLEAFGSSL-----------PFVGSEWRDVFVFGTLILFLVFKPTG 293

Query: 339 LLRL 342
           LL  
Sbjct: 294 LLGR 297


>gi|306841222|ref|ZP_07473937.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Brucella sp. BO2]
 gi|306288744|gb|EFM60066.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Brucella sp. BO2]
          Length = 329

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 52/317 (16%), Positives = 110/317 (34%), Gaps = 22/317 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I  L+  M + GL+++ G +G+L+      Y +GAY       +     WL I +
Sbjct: 24  VLNGAIYGLLLFMVSAGLTLIFGMMGVLNFAHASFYMMGAYFAY--TLQPLTGFWLAILI 81

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I G  G+++    L+    +     L+++     ++ +   I  G          + 
Sbjct: 82  APVIVGIVGVLVERFILRRVHAFGHAHELLVTFGLSVVIAEVIKIFYGN---------FA 132

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + + ++F  F    V Y  +  ++      +   I L L RT I    R+     +
Sbjct: 133 VEYRIPAALQFSAFDLGGVSYPFYRLFIGAVALVMFLLIYLLLTRTRIGIVVRSAIYRPR 192

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-----------FKFSENI 267
              +L   +    +  F V +   G+AG+   A                           
Sbjct: 193 TVEALGHNVPLVFMGVFGVGAFLAGLAGSVAGAFYTTNPNMALELGVMVFVVVVVGGLGS 252

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  ++     +  LS +A    + I  +    G+  Y            +    TL    
Sbjct: 253 LGGAMFASLLIGILSSVAVGVKVSIASLLDYVGLGDYACEIGGVLTLEVSSIAATLPFFL 312

Query: 328 LFLVILMRSHSLLRLRT 344
           + +V+L+R   L   + 
Sbjct: 313 MLIVLLVRPSGLFGAKE 329


>gi|241113153|ref|YP_002972988.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240861361|gb|ACS59027.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 304

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/270 (12%), Positives = 85/270 (31%), Gaps = 9/270 (3%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             +    +    Y + A GLS +   + +++L         AY   +L ++ G+  +  +
Sbjct: 3   NTLLQGILLGGYYAVIACGLSFMFSVMRIINLAHGSLAVAAAYGLWLLAAKAGIPPFAGL 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +   +  A G ++    L+       +  ++ +     ++        G     +A   
Sbjct: 63  LIVLPVMAAAGWLLQRFILERSARGGTLLPILTTFGLSIVIDNLLFEQFGADTRSLAP-- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + +L          +        +++    +   +  +L R A+  A R   ++
Sbjct: 121 -----FIGNLSYASWQLPGHIYVGKLAVLMMVTAILVLGGLQFFLSRFALGRAIRATAED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 +          A A++   +G+AGAF                + +      ++G
Sbjct: 176 PDTAGLVGIDARRVNAVATAITMVTVGIAGAFLGMRATF--SPYSGGPQLLFAFEAAVIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           G  SL        +L     L   ++   F
Sbjct: 234 GAGSLWGTLAGGIVLGLAQSLGAQLHPQGF 263


>gi|223041789|ref|ZP_03611980.1| ribose ABC transporter permease protein [Actinobacillus minor 202]
 gi|223017415|gb|EEF15835.1| ribose ABC transporter permease protein [Actinobacillus minor 202]
          Length = 319

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 95/312 (30%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++        +   + ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 17  IIALITLIVVVSFLNPDFFTTDNLLNILRQTSVNAIIAIGMTFVILIAG-IDLSVGSVLA 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   +         L ++++IP+  +  G  G++ G      +        + M      
Sbjct: 76  LTG-AVAATLVGMDLPVYVVIPIVLIFGGLIGLLNGSLVAFGKVQAFMATLITM------ 128

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +  G   IY+  R    G +  +          ++   + ++ +         
Sbjct: 129 ------LLLRGVTMIYMGGRPISTGFSENADAFAEIGTGIWLGIPVPVWLMFALFALGWF 182

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +     +T +      +  N+ A       +   KL  FAVS     +AG    +    
Sbjct: 183 VL----TQTRMGRYIYALGGNESATALSGINVNKVKLFVFAVSGVLAALAGLIVTSRLGS 238

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+     +GG   +        I+  +      ++   +  L+
Sbjct: 239 AQPTAGTGYELDAIAAVVVGGTSLMGGKGRIIGTLIGALIIGFLSNALNLLDIDSYYQLV 298

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 299 AKALVILAAVIL 310


>gi|13471992|ref|NP_103559.1| permease protein of ribose ABC transporter [Mesorhizobium loti
           MAFF303099]
 gi|14022737|dbj|BAB49345.1| permease protein of ribose ABC transporter [Mesorhizobium loti
           MAFF303099]
          Length = 338

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 91/309 (29%), Gaps = 13/309 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L      ++  +   +      + ++  QI I  + A G++ V+ + G + L+     A
Sbjct: 25  LLFLAALVVVFTVLKPSFIDPINLFNITRQISITGLIALGMTFVILTAG-IDLSVGSLLA 83

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                  ++      +   L        G    ++    +      +    +      + 
Sbjct: 84  FCGMVAAVVAKGGAANTLSLSTSGTQGYGWFAALLAAVIVGAAAGGVQGLAIT-----RL 138

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +  +     G             G  +       R+  + +I  + +  ++  +     
Sbjct: 139 KVPPFVVTLGGLTVFRGLTLTISNGGPISGFDASMRWFGTGLIGPVPVPAIIFAVAA--I 196

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              + LR T    A   +  N +A       +    +S + +   F G+A    +A  + 
Sbjct: 197 LCHIVLRYTRYGRAVYAVGGNAEAARLSGLRVDRILVSVYVIVGFFAGLAAFVLSARLNS 256

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                    E  ++ ++VI      GG+ S+       A++  +       N   +   +
Sbjct: 257 SEAVAGIGYELTVISAVVIGGTSLFGGIGSVGGTVVGAALIGVLQNGLQFNNVSSYTQSI 316

Query: 311 KFDCSFNMR 319
                  + 
Sbjct: 317 VIGLILILA 325


>gi|330873700|gb|EGH07849.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 268

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 75/282 (26%), Gaps = 17/282 (6%)

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G++++       +GAYS  ++           I    +I+      +             
Sbjct: 1   GVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEFYPLIALPVAFFVTAVIGMALER--T 58

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           +   +     + +L  W         + +A     +       +         ++     
Sbjct: 59  VIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNLVLPYNR 118

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
             ++    F+     L L +T +    R +  N+              + AF + S   G
Sbjct: 119 IVIIAFALFVVLLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGLGSGIAG 178

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           + G   A S+          S  I    +V+LGG+  L+    A   L    ++      
Sbjct: 179 LGGV--ALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVTAAFGLGIANKILEPQIG 236

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                +L                        R   L  L+  
Sbjct: 237 AVLGKILILALIILFIQK-------------RPQGLFALKGR 265


>gi|222081191|ref|YP_002540554.1| ribose ABC transporter [Agrobacterium radiobacter K84]
 gi|221725870|gb|ACM28959.1| ribose ABC transporter [Agrobacterium radiobacter K84]
          Length = 350

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/313 (10%), Positives = 87/313 (27%), Gaps = 10/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +V   +         S     +M   + I+ + A G+ ++V   G + L+     
Sbjct: 31  AFFALIVIIAVFSFLSPYYFSLSNFLTMASHVAIFGILAIGM-LLVILNGGIDLSVGSTL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       L     LS + +I    + +      +           +    +   ++  
Sbjct: 90  GLAGCIAGFLMQGVTLSSFGVILYPPVWAVVVITCVIGAI----VGAVNGVLIAYLKVPA 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +             + + + L +     R  +    F          +   ++ +  L+
Sbjct: 146 FVASLGVLYVARGIALLMTNGLTYNNLGGRPELGNTGFDWLGFNRLAGIPIGVIVLAALA 205

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L +TA          N++A       +   K+  +  S     +AG   ++   
Sbjct: 206 IICGLVLSKTAFGRWLYASGGNERAADLSGVPVKRVKILVYVFSGVCAAIAGLVLSSQLT 265

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG  ++        ++  + +    +    +   
Sbjct: 266 SAGPTAGTTYELTAIAAVVIGGAALTGGRGTVRGTMLGAFVIGFLSDGLVIIGVSAYWQT 325

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 326 VFTGAVIVLAVLM 338


>gi|148261193|ref|YP_001235320.1| inner-membrane translocator [Acidiphilium cryptum JF-5]
 gi|326404596|ref|YP_004284678.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|146402874|gb|ABQ31401.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Acidiphilium cryptum JF-5]
 gi|325051458|dbj|BAJ81796.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 302

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 51/291 (17%), Positives = 105/291 (36%), Gaps = 22/291 (7%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           S+   ++ ++  A GL+++ G  G L    V  +  GAY+  +L +  GL + + +    
Sbjct: 26  SVLFTMMTFMALAQGLNLLYGFTGYLPFGYVGFFGTGAYATSLLVTFTGLPVLVCVLGGG 85

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           + +   G+I+G P L+  G Y +IA L  S+I   ++                       
Sbjct: 86  LAAVVVGLILG-PLLRLSGAYFSIANLAASQIIYYVVANEALKH---------------- 128

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                    +      V      Y  +L +  L+  +  + RR+      R +  +  + 
Sbjct: 129 ----VTGGPYGVKIEQVYAPTASYATMLAILLLATGLAAYFRRSRFGLGLRAMHQDPISA 184

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVISIVILGGMT 279
                 I+  +L  +  S+   G+ G  +A +     PD  F    ++  I   + GG+ 
Sbjct: 185 GLAGVNIVRERLIVWLASAGIAGLVGGAYAWNLSVFYPDAVFTLQISVFAIVFALFGGVG 244

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           ++       A+L     +       YF  L        +      +++L +
Sbjct: 245 TVIGPLLGAALLYAFYAVIGVSAPQYFELLYGLLIVLLVLFLPNGLMSLLI 295


>gi|33599589|ref|NP_887149.1| putative branched-chain amino acid transport system permease
           protein [Bordetella bronchiseptica RB50]
 gi|33567185|emb|CAE31099.1| putative branched-chain amino acid transport system permease
           protein [Bordetella bronchiseptica RB50]
          Length = 291

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 97/306 (31%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLL 95
           + +      +Y++F+ GL+I+ G L +++      +   A    +     + +  + +++
Sbjct: 8   LFTALQISSVYILFSLGLTIIFGVLKVVNFAHGQFFTFSALVLSLALSWLAPHVGNPFVV 67

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
             ++ +   A  ++ GL   +F    L    +    +   +++ ++ +     G  V   
Sbjct: 68  YLLAGLAGLAACLLFGLVLYQFGFKRLERDMIGSFILSAGLVLFFEGLMLEIFGGAVRPV 127

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
              +   V             +        + +    L+  II  LR T    A R +  
Sbjct: 128 PALIDGNVD---------LLGLSVSKQRLVLFVFAVALTTLIITLLRSTKFGKALRAVAI 178

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           + +A            L  F +++    +AG   A            +         V++
Sbjct: 179 DHEAAMLQGIAYRKIALYGFLIATGVAAIAGMLIAPVAAVTPTLGDSYLVKG--FIAVVV 236

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S+      + ++  +                             + + + LV+L++
Sbjct: 237 GGMGSIVGAIFGSLLIALLESFIGFYFD-------------PSAANLTIFVIVMLVLLIK 283

Query: 336 SHSLLR 341
                 
Sbjct: 284 PKGFFG 289


>gi|332284849|ref|YP_004416760.1| inner-membrane translocator [Pusillimonas sp. T7-7]
 gi|330428802|gb|AEC20136.1| inner-membrane translocator [Pusillimonas sp. T7-7]
          Length = 301

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 91/302 (30%), Gaps = 18/302 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +  + + GL+++ G +G+L++     YA G Y+         ++       
Sbjct: 10  LVDGVAYACLLFLVSMGLTLIFGVMGILNVAHGAFYAFGGYAAA--SFIIMIAPSTESAW 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +IS     I+    L    + L I      +    +L+ +  +   +    +      
Sbjct: 68  IPLISLFLVAIVVGTVLGGLMELLLIRRAQAYDPILKLLLTFGALLMLEDIQRLIWGAQP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +                    +  V L        +  +LR T +      +  N++
Sbjct: 128 YSASEVVNRLGNIELGDITYTTYQLVVVPLTALVAYVGLEYFLRYTNLGKQMVAVTHNRE 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              S         +  F + +    + GA  + +   +          ++  ++V   G+
Sbjct: 188 VAISQGINARKIGMITFIIGAILGVLGGALASPTTSLV--PGVGADMIVLSFAVVATAGL 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             ++    A  ++  V  +   M                     +  I + LV+L+R H 
Sbjct: 246 GQITGALVAALLIGIVRSIAVYMA--------------PEFEVAVPYIIMCLVLLVRPHG 291

Query: 339 LL 340
           L 
Sbjct: 292 LF 293


>gi|290510316|ref|ZP_06549686.1| ribose transport system permease [Klebsiella sp. 1_1_55]
 gi|289777032|gb|EFD85030.1| ribose transport system permease [Klebsiella sp. 1_1_55]
          Length = 355

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/300 (11%), Positives = 84/300 (28%), Gaps = 10/300 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      + +    +   +  M   + I  + A G+++V+   G + L+      
Sbjct: 17  FIALLLVIAFFSVMVPNFLTASNLLIMTQHVAITGLLAIGMTLVI-LTGGIDLSVGAVAG 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I       L +         I    +      + +    +      +     +   I   
Sbjct: 76  ICGMVAGALLTNGLPLWNGDILFFNVPEVILCVAIFGVLVGLVNGAVITRFGVAPFICTL 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            ++         + +   D   +        +    F +      + +Y  +  M     
Sbjct: 136 GMMYVAR----GSALLFNDGGTYPNLNGMEALGNTGFATLGSGTLLGVYLPIWLMIGFLV 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +T +      I  N+ A       I+ AK+  +A S       G   A+    
Sbjct: 192 LGYWLTTKTPLGRYIYAIGGNESAARLAGVPIVKAKIFVYAFSGLCAAFVGLIVASQLQT 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + V     + GG   ++       +++ + +    M    F  ++
Sbjct: 252 AHPMTGNMFEMDAIGATVLGGTALAGGRGRVTGSIIGAFVIVFLADGMVMMGVSDFWQMV 311


>gi|256371323|ref|YP_003109147.1| inner-membrane translocator [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007907|gb|ACU53474.1| inner-membrane translocator [Acidimicrobium ferrooxidans DSM 10331]
          Length = 291

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 88/302 (29%), Gaps = 28/302 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   +  + A GLS+  G    ++       A+G +          L  WL   V  + 
Sbjct: 12  IVTSAVLALAAVGLSLQFGVTNYVNFAYGAYLAVGMFVTYTASVGLHLPFWLGGLVGVIA 71

Query: 103 SGACGMIMGLPS--LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           SG   + + +       R        LI++     IL+       G              
Sbjct: 72  SGLAAVAVDVAVLEPFVRRGTSGFFLLIVTFGLSLILLNLVQAIWGVGFDRYP------- 124

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                +                   V++    +   + L L RT +  A R + DN    
Sbjct: 125 -----IAAGNPLHLGPFSLTAAQIGVVIVAAVVMVGVHLLLTRTRLGMAMRAMSDNAPLA 179

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +            + +S A  G+ G   A +           +   ++ + VILGG+  
Sbjct: 180 AASGIDTRRTTRWTWFLSGALAGLGGITLALNTVEFQAFT-GNTFLFVIFAAVILGGIGK 238

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +        ++   + L   +    ++  + F             + L L +L+R   + 
Sbjct: 239 IYGAMVGALVIGLAISLSTLVISAAYSLDVAF-------------LVLVLTLLIRPQGIF 285

Query: 341 RL 342
             
Sbjct: 286 AT 287


>gi|226310269|ref|YP_002770163.1| galactoside ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226093217|dbj|BAH41659.1| galactoside ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
          Length = 339

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 90/312 (28%), Gaps = 9/312 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ V+    + ++     S   +  + +Q     + A G + V+   G   L+     
Sbjct: 18  IYIVLVLLIAGIAIYDPNFLSITTLRDILMQSSTRAIIALGAAFVL-ITGGTDLSAGRVV 76

Query: 75  AIGAYSYV--ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            + A      +    Y    +  +P   ++      I     +      + ++   +   
Sbjct: 77  GLTAVISASMLQTQDYPRRFFPDLPDLPLLIPILIAIAAGLLVGLING-IIVSRFSVPPF 135

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
              + +                        +RS                 + Y+++    
Sbjct: 136 IATLGMMVIVYGFNSIYFDREPNQSQPIAGLRSDFNQLGTGYIGPSGPYSIPYIVIIAIV 195

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           ++  + +   +T +      I  N +A       + F  +  +A++ A  G+ G   AA 
Sbjct: 196 VAFIVWVIFNKTRLGKNMYAIGGNMQAATVSGINVAFNLMMIYAIAGALYGLGGVLEAAR 255

Query: 253 RDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
               + +     E   + + V+      GG+ ++  +     I   +      +    + 
Sbjct: 256 TGGATNNYGNMYELDAIAACVVGGVSTSGGIGTVPGVLAGVLIFGVINYGLTFIGVSPYW 315

Query: 308 SLLKFDCSFNMR 319
            L+         
Sbjct: 316 QLIIKGLIIVAA 327


>gi|261346690|ref|ZP_05974334.1| ribose ABC transporter, permease protein [Providencia rustigianii
           DSM 4541]
 gi|282565089|gb|EFB70624.1| ribose ABC transporter, permease protein [Providencia rustigianii
           DSM 4541]
          Length = 320

 Score = 59.5 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 84/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + S    ++  +    A+ +        + +                + F  
Sbjct: 82  LTGAVAASMVSADVNALVAVAGALALGAAIGACTGVIVAK------------GKVQAFIA 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +    L  +F     F I       +++       
Sbjct: 130 TLVMMLLLRGVTRVYTDGSPINTGFSDNADLFGWFGIGRPFGIPTPVWLMIIVFAAAWYV 189

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T +      +  N+ A       +   K++ +A+      +A     A    
Sbjct: 190 L-----HHTRLGRYIYALGGNESATRLSGINVDRIKIAVYALCGLLAALASVIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +       ++
Sbjct: 245 AQPMAGNGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGISSNYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|188588927|ref|YP_001920834.1| ribose transport system permease protein RbsC [Clostridium
           botulinum E3 str. Alaska E43]
 gi|188499208|gb|ACD52344.1| ribose transport system permease protein RbsC [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 311

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 47/330 (14%), Positives = 92/330 (27%), Gaps = 30/330 (9%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F   L KY  I+ L+ +    ++     +  +   I ++  Q+    + A G++ V+   
Sbjct: 5   FKQNLVKYKSIIGLVLLCT--IITFVTPSFLTISNITNVFTQVSTNAIIAVGMTFVI-LT 61

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+     AI       +    G     +I  + +      +   L S         
Sbjct: 62  GGIDLSVGSTLAISGALAASIIKSTGNVFLAVIVAALVGIAVGFVNGMLISKGKLQ---- 117

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
                       + I          G  ++             I F   P    I    +
Sbjct: 118 ----AFIVTLATMTIFRGLTLVFTNGTPISKLPETFIKIGNGKIGFMPIPVIITIVIAIV 173

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
              LL              +T        +  N+ +           K  A+ +S     
Sbjct: 174 AIYLL-------------NKTRFGRYLYALGGNEDSARLSGINTDKIKTLAYVISGFASA 220

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           +AG    +     SP+       +  I+ V++GG              I    +   +  
Sbjct: 221 IAGVIITSRIASASPNA-GTGFELDAIAAVVIGGT-----SLAGGEGKISGTIIGALIIG 274

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
              N L   + S   +     ++ L  V+L
Sbjct: 275 ILNNGLNLMNVSPFYQSIVKGLVILMAVLL 304


>gi|91779203|ref|YP_554411.1| ABC sugar transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91691863|gb|ABE35061.1| ribose ABC transporter membrane protein / mannose ABC transporter
           membrane protein / fructose ABC transporter membrane
           protein [Burkholderia xenovorans LB400]
          Length = 328

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 102/322 (31%), Gaps = 24/322 (7%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGA-TKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
           F+ RL    +I  L+A+V     F+   +   S + +  +  Q ++  + A G +++V  
Sbjct: 14  FADRLPSLAEIGPLIALVLACGFFISQSSRFLSFQNLSLILQQTMVVAVIAIGQTLIV-L 72

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G + L+C +  A G+          G+   L I      S   G + G+   + +    
Sbjct: 73  TGGIDLSCGMVMAFGSIIMTKFAVTLGVPPILAILCGIAASTLFGALNGVLITRIKLPAF 132

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
            +    ++  F    I                      +          F ++F +    
Sbjct: 133 IVTLGTLNIAFALTQIY-----------------SNAESVSNLPDAIMFFGNTFRLGPAD 175

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           + Y  +    +  +    LR T        + +N +A   +  +     L+ ++++ A  
Sbjct: 176 VTYGTVLTLLMYLATWFVLRDTVPGRHLYALGNNAEAARLMGLSSQKILLTVYSLAGAIY 235

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVEL 297
           G+A     +      P   +      + ++V+      GG  S+        I+      
Sbjct: 236 GIAALLSVSRTGVGDPQAGQTENLDSITAVVLGGTSLFGGRGSIVGTLLGALIVGVFRNG 295

Query: 298 CCGMNFYYFNSLLKFDCSFNMR 319
              +       +L       + 
Sbjct: 296 LTLIGVSSVYQVLITGMLVILA 317


>gi|186684052|ref|YP_001867248.1| inner-membrane translocator [Nostoc punctiforme PCC 73102]
 gi|186466504|gb|ACC82305.1| inner-membrane translocator [Nostoc punctiforme PCC 73102]
          Length = 377

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 57/156 (36%), Gaps = 3/156 (1%)

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L R+      + IR++++   +L   + + KL +  +  A  G+AGAFFA    
Sbjct: 225 YWRLEILVRSPWGRILKAIREDEEIPKALGKNVFWYKLQSLILGGAIAGIAGAFFAWQLS 284

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            I PD F+         +VILGG  +         I      L   +     +       
Sbjct: 285 AIYPDNFQPQITFDTWIMVILGGSGNNVGTILGAVIFFAYDALTREVLPRIVHLDEA--- 341

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                   ++ + L ++++ R   +L  +      +
Sbjct: 342 RLGAFRIMVIGLILMILMIWRPQGILGKKEELTLGK 377



 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 54/112 (48%), Gaps = 1/112 (0%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+  + I   ++ +F  GL++  G  GL++   +    +GAY+ V+L  +  + + +  
Sbjct: 3   DYLIFLAISTALFALFGLGLNLQWGFTGLINFGHIAFMTLGAYTTVLLSLKG-VPLLISA 61

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
              A+++   G+I+G  +L+ R DYL I T+   E+ + ++           
Sbjct: 62  VAGAIVAALLGLIIGFATLRLREDYLGIVTIGTGELIRLVVNNQDLPVGDTW 113


>gi|220920344|ref|YP_002495645.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219944950|gb|ACL55342.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 297

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 95/306 (31%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I   +Y + A    ++  +  +++        IGA+    L + Y L   + + V
Sbjct: 10  VLNGLIVGALYGVVAMSFVLIYKASQVVNFAQGEFLLIGAWICWWLLTTYQLPFVVGMLV 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G+ + +  L+       I+ ++++               G            
Sbjct: 70  TFAFMLVFGIALQVVVLRPLIGEPIISVIMVTIGLSIFFQALCKWLFGVFAQPFPPIFAT 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +  +      L     + A+   + R +    A R    +Q+
Sbjct: 130 -----------QSVSILGLEIQTVYLMSLGISVAMMAAFAWFFRFSRHGLAMRATAFDQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL   +      A+A+S+    +AG          S         I V   VILGG+
Sbjct: 179 VAQSLGIPVRNVFAMAWAISAVVSSVAGIVVGIVNGVSSALSLY---GIKVFPAVILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  +  +   ++  Y +            +  +    L ++++++ + 
Sbjct: 236 DSVVGAVIGGLVIGLLENIAQYVDGQYLHW--------GNLYEIVPFYVLVVILMIKPYG 287

Query: 339 LLRLRT 344
           L   R 
Sbjct: 288 LFGTRD 293


>gi|297155683|gb|ADI05395.1| ABC transporter permease [Streptomyces bingchenggensis BCW-1]
          Length = 344

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 97/305 (31%), Gaps = 24/305 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           S+        +  +    V+  L  ++      + + +  + +   I V+ A G S+VV 
Sbjct: 20  SLVDTVFRAREISIAGALVLLVLFTWIAEPRFLNDQGVKDLLLNAAILVLLAVGQSVVV- 78

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
               + L+      + A++     S       L+  +   +  ACG++ G      +   
Sbjct: 79  VTRNIDLSVGSVVGLSAFACGKFVSGTDHGPLLVALLGIAVGMACGLVSGALVSFGKVPA 138

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           L +   ++  I                     D  +  G  + +               +
Sbjct: 139 LVVTLGMLYIIQ------------------GIDYWWAEGEQINAADVPQSVLDLGSGSVL 180

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            + Y+ L    + A    +LR          I  + +A       I    L A+  S A 
Sbjct: 181 GIPYLPLISFAVLAVTAYFLRSYRSGRELYAIGSSPEAARLAGVPIRRRVLGAYVFSGAV 240

Query: 242 IGMAGAFFAASRDRISPDMFKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVE 296
            G AG+ + A    +  D     E      ++V  + I+GG+ ++   A    +L  +  
Sbjct: 241 AGFAGSLWLARFGTVVADNAHGWELTVVSAVVVGGVAIVGGVGTVWGAALGALLLTTIGS 300

Query: 297 LCCGM 301
               +
Sbjct: 301 ALSVL 305


>gi|254503512|ref|ZP_05115663.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222439583|gb|EEE46262.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 304

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 40/315 (12%), Positives = 95/315 (30%), Gaps = 23/315 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG--------L 90
           +    +      + A GL++ +  L   + +     +IGAY  ++    +          
Sbjct: 5   LVDGILVGSFLSLGAIGLTMAMHILRFANFSHAELLSIGAYCALVFDKVFESLLPVLAAK 64

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              L +  +  IS    M +   S      ++        E    +   +      +  I
Sbjct: 65  IGPLSMTGALAISIVLSMAITGLSAVLIDRFIFQRVRQKGEELSMVFASFGMALIIRNII 124

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +   L     +              ++ +    +VL+    L  ++ L L RT    + 
Sbjct: 125 GLVFGLSAELYSGDIAFAMILSRDPLLLVKPDQVFVLIAALILMFALHLVLSRTTFGFSL 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R + +N          +     + + +      +AG F+  S       +      + + 
Sbjct: 185 RAVAENPSLAQVHGVNLKRMIAAVWIIGGGLGAVAGIFYGLSYQI--TPVMGRDLVLPIF 242

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +  I+GG+ S+        I+     L   +    ++  + F             + +  
Sbjct: 243 AATIVGGIGSVYGAVLGGFIVGIASNLALVILPSGYSPSVPF-------------LMILA 289

Query: 331 VILMRSHSLLRLRTP 345
           V+L+R + L      
Sbjct: 290 VLLVRPNGLFGEARA 304


>gi|254449771|ref|ZP_05063208.1| permease protein, haat family [Octadecabacter antarcticus 238]
 gi|198264177|gb|EDY88447.1| permease protein, haat family [Octadecabacter antarcticus 238]
          Length = 267

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 81/291 (27%), Gaps = 27/291 (9%)

Query: 54  WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113
              S++ G L   +        +GA++   L    GL + L    +   +G    +  + 
Sbjct: 1   MAFSLLFGILRFPNFAIGGYITVGAFAAYTLNVALGLPLALAAAGAMAFTGLVVWLAHVL 60

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
             +      ++  L++S     IL     +            L      + + I   +  
Sbjct: 61  VFRPMESQSSVTLLVVSIALTLILESIVRLFFSADVRGFDIPLERPWKFLGARITTEQIE 120

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
                  +     +L               T I  A R++ DN                 
Sbjct: 121 IIICAIVLATCLHILL------------HHTRIGRAMRSVSDNPMLASIRGVDAAKVTAF 168

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
              +  A  G+ G         +   +  ++  I + +  ILGG+ S         +L  
Sbjct: 169 TTVLCGAMFGLTGVLAGLDL--VIEPLIGWNLTIPIFAAAILGGIGSPYGAILGALMLGL 226

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             EL   +    +   + F             + + +++L R   L     
Sbjct: 227 AEELTVLVLPSTYKIGVGF-------------VIITVLLLFRPQGLFGTAE 264


>gi|89097291|ref|ZP_01170181.1| ribose ABC transporter (permease) [Bacillus sp. NRRL B-14911]
 gi|89088114|gb|EAR67225.1| ribose ABC transporter (permease) [Bacillus sp. NRRL B-14911]
          Length = 339

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 50/320 (15%), Positives = 102/320 (31%), Gaps = 13/320 (4%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y     LL  +  +   +   A  S   I  +   I I  + A G++  +   G   L+ 
Sbjct: 10  YKYGAILLMALILVYFTIVNPAFFSYGNISDILRSISIVTLLALGVTFTLIVDG-FDLSV 68

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               ++       L   + L +WL++ +  +   A G+   L  +K +        L+ +
Sbjct: 69  GSTMSLATVLTASLMVWFELPLWLVLILPILAGAAVGLFNSLLIVKIKIP-----DLLAT 123

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                I+            IY    L   G         F +     ++ I +  +++ +
Sbjct: 124 LGVMYIISGLHRTYTEGYSIYSHMELTAGGKAPGEFYPNFLWIGQGRLWGIPVPVIIMLI 183

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              +  ++L   +T           N +A     T +   K  A+ VS  F  +AG  FA
Sbjct: 184 LVAAVYVVLN--KTRWGRILYMTGGNAEAARLSGTNVNKVKTLAYVVSGIFASLAGILFA 241

Query: 251 ASRDRISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           +       D         V ++     V+  G  +        A++  ++     +N  Y
Sbjct: 242 SRVGSGQIDSGASLLMEAVAAVFVGFSVLGAGKPNALGTFFGAALIGVLLNGLTMLNLPY 301

Query: 306 FNSLLKFDCSFNMRHTTLMV 325
           +   +       +  T    
Sbjct: 302 YAFEIVKGTVLVLALTVTYF 321


>gi|293602422|ref|ZP_06684868.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292819184|gb|EFF78219.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 290

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/284 (10%), Positives = 76/284 (26%), Gaps = 13/284 (4%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               +IY + A+G  +   + G L+     A  +GA   + L         ++  V    
Sbjct: 11  IALGMIYAVIAFGYQLTFATSGTLNFGQGEALMLGALVGLTLVGLGVNYWVMIPIVCIFG 70

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                ++  +              ++ +     I         G                
Sbjct: 71  FAQGALVERVGVRPAIKTRSEFGWIMATIALGIIFKNVAENIWG-----------RDDLR 119

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             S +                  V+ G   +   + ++ R++    A+    +++ A   
Sbjct: 120 FPSPLPEAPIQVLGANVLPMELLVVFGALGMMILVEIFNRKSIYGKAFVATSNDRDAAGL 179

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +          ++A+SS     AG   A     ++         +   ++ I+GG++S  
Sbjct: 180 MGINTGMVITFSYALSSLTAAFAGVLVAPL--TLTGATMGAVLGLKAFAVAIIGGLSSGM 237

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            +     IL              +  +        +       +
Sbjct: 238 GVVVGGLILGIAETTTGFYLSTGYKDVPGLVLLLLVLTFKPAGL 281


>gi|284175780|ref|ZP_06389749.1| ABC transporter, permease (branched chain amino acid) [Sulfolobus
           solfataricus 98/2]
          Length = 171

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 59/168 (35%), Gaps = 4/168 (2%)

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            +LL    +   +   +  + +  A+R +R+N+     L   I   +  A A+     G+
Sbjct: 1   ILLLVFSLIMLLLFNLISNSPMGRAFRAVRENEDLVEVLGRDIGVIRGKAMALGGFLAGV 60

Query: 245 AGAFFAASRDRISPDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           AG+ +A     +    F   + +     ++ILGG  +         I   +  +   ++ 
Sbjct: 61  AGSLYAFYIGSVFAGAFDNLTWSFNPYLMLILGGAGTSIGALLGALIYSTLYHV---IDL 117

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
           Y                  L  + L +++++R   ++  +       +
Sbjct: 118 YKQTIGYYLHFDAVWLQYMLFGLVLTIILILRPQGIVVEKAKPLVKPK 165


>gi|218781341|ref|YP_002432659.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218762725|gb|ACL05191.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 291

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/294 (10%), Positives = 88/294 (29%), Gaps = 26/294 (8%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           Y +    + I+  +  +++           +   ++   YG+     +P++A+ +   G 
Sbjct: 18  YALMGIAMVIIYKTSEVVNFAQGEMALASVFFTYMILQNYGIPFVYAMPLAALFAVFVGC 77

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
           ++    L+       +  +I++   + IL+       G     +   +            
Sbjct: 78  VLEFAVLRRARRQTTLGMIIVTIGLEMILMGLVSWKFGADHKVMPFPITEFE-------- 129

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                 +              +  +   + ++ R T +    +  + N+ A   +     
Sbjct: 130 --SIWLAGFYVTTLEAVTFSVVWAVMLGLFVFYRCTRLGLIMKATQQNRSAAKLMGVRTN 187

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
              +  + +SS    +AG   A            +   +   +  ++GGMTS+       
Sbjct: 188 RVLMFTWGLSSLVGCIAGLLLAPRSM---EPFMMWDPMLKGFAGAVVGGMTSIPGAVFGA 244

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             +  V  L        F S + F               + +V+ ++   +   
Sbjct: 245 YFIGIVENLFGRYASMEFKSAVAF-------------ALIVIVLCVKPSGIFSR 285


>gi|83311425|ref|YP_421689.1| branched chain amino acid ABC transporter permease
           [Magnetospirillum magneticum AMB-1]
 gi|82946266|dbj|BAE51130.1| Branched-chain amino acid ABC-type transport system, permease
           components [Magnetospirillum magneticum AMB-1]
          Length = 295

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 107/318 (33%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           ++  L +        +    I    Y M + GL+++ G L +++ +    Y +GA+   +
Sbjct: 1   MMTILGIPTQALFGQLLLGLINGAFYAMLSLGLALIFGLLNIINFSHGALYMMGAFVAWL 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
             +  GL  W  + V+ ++    G+++    L        +  L+++     I+      
Sbjct: 61  ALNFLGLGYWGALIVAPLVVALVGIVIERTMLCRLYKLDHLYGLLLTFGLALIIEGLFRE 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G +G   +                  +   F+   I+  +V++    L       + +
Sbjct: 121 GYGVSGQPYSVP----------SALAGGWNLGFMFLPIYRGWVVVASLVLCLGTWYAIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N     +    +       +    A   +AG   A             
Sbjct: 171 TKLGAYLRAGTENPTLVQAFGINVPLMITLTYGFGVALAAIAGVLAAPIYQV--SPKMGS 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
              I+V ++V++GGM S+        +L  V  L                  +    +T+
Sbjct: 229 DLIIVVFAVVVIGGMGSIMGSILTGYMLGIVEGLTKVF--------------YPEAASTV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           + + + +V+L++   L  
Sbjct: 275 IFMVMVVVLLIKPAGLFG 292


>gi|330470240|ref|YP_004407983.1| inner-membrane translocator [Verrucosispora maris AB-18-032]
 gi|328813211|gb|AEB47383.1| inner-membrane translocator [Verrucosispora maris AB-18-032]
          Length = 296

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 89/279 (31%), Gaps = 6/279 (2%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           Y + A GLS+V G   +L+    +   +GAY+          +          ++     
Sbjct: 18  YFLVASGLSLVFGLADVLNFAHGLFLGVGAYATWWAAGNLPGAGSDGFGFVVAVAFGVAA 77

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
              +  L        + +  + ++   + +    +   +A      R +      R +  
Sbjct: 78  GTLMAVLVELVLIRPLYSRTIEQVLVTVGLSLAGVALLQATWGADARPFPRPEWTRQVTT 137

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                            +++    + A+I+ +L+ T      R   +N++   +L   + 
Sbjct: 138 ILG-----AQVPNGGLLLIVAAVLVLAAILAFLQWTRYGLIIRAGVENREMVTALGIDVR 192

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
            A    FA+  A   +AGA  +     +SP        I    +V++GGM S+   A A 
Sbjct: 193 KAFTLVFAIGGAAAALAGALGSVYFGTVSPQQGGSLL-IFAFIVVVIGGMGSVVGSAYAA 251

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +  + +            +        +       IA
Sbjct: 252 VAVGLLQQFVNYYGTSGLGDICVVALLAVVLLLRPQGIA 290


>gi|118587867|ref|ZP_01545277.1| inner-membrane translocator [Stappia aggregata IAM 12614]
 gi|118439489|gb|EAV46120.1| inner-membrane translocator [Stappia aggregata IAM 12614]
          Length = 332

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 46/328 (14%), Positives = 98/328 (29%), Gaps = 24/328 (7%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           FS+R   ++  + L  +   +   LF     +   I ++  QI I ++ A G++ V+   
Sbjct: 16  FSIRTVLHNAGIGLALLALIVFFSLFTEHFLTPNNITNILTQITINLVLAVGMTFVILIG 75

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+     A  A       +  G      I ++ + +   G+  G  +      +  
Sbjct: 76  G-IDLSVGSVMAFAAVVAGKAITLPGFGPAEAIALAVVAATLTGVFCGFLNGAISAYWSL 134

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
            + +I   +          ++  +                                   +
Sbjct: 135 PSFIITLGMLNIARGAALQVSEAQTIYSFPFAFEEF----------------GSAMIYGV 178

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
             V L    L       L  T        I +N++A      ++   K++AF +     G
Sbjct: 179 PVVFLVALVLVFIAWFVLNFTVFGRLIYGIGNNEEAVRLAGHSVARYKIAAFTICGLTAG 238

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVEL 297
           +A   + A  + IS  +      +  I+ VI+      GG  S+        I+  +   
Sbjct: 239 IAAVVYMARLN-ISSPIAGIGFELNAIAAVIIGGTSLSGGRGSVIGTLLGAFIIGVLANG 297

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
              +    F   +       +       
Sbjct: 298 LILIGLSDFMRQMITGVVIIVAVILDYY 325


>gi|330821586|ref|YP_004350448.1| Monosaccharide-transporting ATPase [Burkholderia gladioli BSR3]
 gi|327373581|gb|AEA64936.1| Monosaccharide-transporting ATPase [Burkholderia gladioli BSR3]
          Length = 332

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 84/293 (28%), Gaps = 26/293 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + +   +L+ LF     +   +  +     +  + A G+ +V+   G + L+     
Sbjct: 31  ILAVLIAVGVLISLFSPYFLTTNNLMGVFRSFSLTAIMAIGMMLVI-VTGGIDLSVGSVM 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +    +       S  L    + +++G     +    +        IATL    I +
Sbjct: 90  GLSSLVTALAFQHGLGS--LAAVAAGLVTGMLAGAVNGLLVTRIELPPFIATLGTLSIGR 147

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++                           +      F      Y  F+ + ++ M  L+
Sbjct: 148 GLMYIIT------------------KGVPVTPDVPDGFTFLGQGYLGFIPFPVIVMAALA 189

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A   + +RRT           N+ A           K   + +S     +AG    +   
Sbjct: 190 ACFAVIMRRTRFGRHVYATGGNETAAHLSGVRTRRVKFLVYLLSGTIAALAGVISFSRFV 249

Query: 255 RISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
              P               +    + GG+ S+       A+   +      +N
Sbjct: 250 SAEPAAGFGAELDVIAAAAIGGASLSGGIGSVEGAVIGAALAGIIANGVVLLN 302


>gi|309972344|gb|ADO95545.1| D-ribose ABC transporter, permease protein [Haemophilus influenzae
           R2846]
          Length = 323

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 88/301 (29%), Gaps = 23/301 (7%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           + +      S   I ++  Q  +  + A G++ V+   G + L+     A+       + 
Sbjct: 31  VSMINPDFFSVDNILNILRQTSVNAIIAVGMTFVILIAG-IDLSVGSVLALTGAIAASMV 89

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           S       ++  V  + +   G+   + +                + F   L+    +  
Sbjct: 90  SIELPIFLVIPVVLLIGTLLGGISGVIVAK------------GKVQAFIATLVTMTLLRG 137

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                     +    +    L     F S    Y + +   +  M  + A     L+ T 
Sbjct: 138 ITMVYTDGRPITTGFSDNADL-----FASIGTGYVLGIPVPIWIMSIVFAVAWYILKHTP 192

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           I      +  N+ A       +   K+  FAVS     +AG    +      P      E
Sbjct: 193 IGRYIYALGGNEAATQLSGINVNKIKVFVFAVSGFLSALAGLIVTSRLSSAQPTAGVSYE 252

Query: 266 NIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              + ++V+     +GG   +        I+  +      ++   +  ++       +  
Sbjct: 253 LDAIAAVVVGGTSLMGGKGRVMGTLIGALIIGFLNNALNLLDISSYYQMIAKALVILVAV 312

Query: 321 T 321
            
Sbjct: 313 L 313


>gi|225386520|ref|ZP_03756284.1| hypothetical protein CLOSTASPAR_00267 [Clostridium asparagiforme
           DSM 15981]
 gi|225047379|gb|EEG57625.1| hypothetical protein CLOSTASPAR_00267 [Clostridium asparagiforme
           DSM 15981]
          Length = 291

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 82/303 (27%), Gaps = 24/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G S++   L   +    I   IGA+      S+   +++L I +
Sbjct: 6   LINGLSIGSIYALMAVGYSLIYSLLNFTNFAHSITVTIGAFCAFFFLSQLVQNLFLGILI 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +G   M++ L         L    L+  +  +  L+      +      +      
Sbjct: 66  AVLAAGGLAMLIEL---------LGYRPLLKKKARRIYLLITGLGISTMCENLIIISFSS 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                      +          + L++R++ +  A R    +  
Sbjct: 117 RFRVYPVNFSNESINLFGASVGQVDLIIFAVSITALVLVELFIRKSRVGLAIRGASYDLD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    L  F ++ +      A         +      +         + GG+
Sbjct: 177 ATSLMGVNVQKLILLVFLIAGSL--AGLAGALLGAKYTAFPTLGTAMTNKAFISSVFGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L                  +      +          L +V+ +R   
Sbjct: 235 GSIPGAVLGAITLGIGET-------------MISSYISSSMRDIFAYALLVIVLFVRPSG 281

Query: 339 LLR 341
           L+ 
Sbjct: 282 LMG 284


>gi|33595298|ref|NP_882941.1| putative branched-chain amino acid transport system permease
           protein [Bordetella parapertussis 12822]
 gi|33565375|emb|CAE36178.1| putative branched-chain amino acid transport system permease
           protein [Bordetella parapertussis]
          Length = 291

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 98/306 (32%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLL 95
           + +      +Y++F+ GL+I+ G L +++      +   A    +     + +  + +++
Sbjct: 8   LFTALQISSVYILFSLGLTIIFGVLKVVNFAHGQFFTFSALVLSLALSWLAPHVGNPFVV 67

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
             ++ +   A  ++ GL   +F    L    +    +   +++ ++ +     G  V   
Sbjct: 68  YLLAGLAGLAACLLFGLVLYQFGFKRLERDMIGSFILSAGLVLFFEGLMLEIFGGAVRPV 127

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
              +   V             +        + +    L+  II  LR T    A R +  
Sbjct: 128 PALIDGNVD---------LLGLSVSKQRLVLFVFAVALTTLIITLLRSTKFGKALRAVAI 178

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +Q+A            L  F +++    +AG   A            +         V++
Sbjct: 179 DQEAAMLQGIAYRKIALYGFLIATGVAAIAGMLIAPVAAVTPTLGDSYLVKG--FIAVVV 236

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GGM S+      + ++  +                             + + + LV+L++
Sbjct: 237 GGMGSIVGAIFGSLLIALLESFIGFYFD-------------PSAANLTIFVIVMLVLLIK 283

Query: 336 SHSLLR 341
                 
Sbjct: 284 PKGFFG 289


>gi|115526207|ref|YP_783118.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115520154|gb|ABJ08138.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 288

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 100/304 (32%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       ++  + A GL++ +G +  ++L        G Y   +L +R G   +  +P+
Sbjct: 7   LFDGVAYGMLLFVLACGLAVTLGLMNFVNLAHGAFAMAGGYVCAVLVNRIGWPFFAALPM 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + S   G IM     +   +   +  ++ +     + +       G    ++      
Sbjct: 67  AFVASALIGAIMERSLYRHLYNRSHLDQVLFTVGLTFMAVTAVDYVMGSQQTFIQLP--- 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I   +     V    +   +++    L+ ++ L L +T   +  R   D+ +
Sbjct: 124 -------QILQGQIDLFGVGIGRYRLMIIVICGLLTLALQLILSKTRFGSRLRAAVDDPR 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +       FA      G+ GA  A          F     I  + +V +GG 
Sbjct: 177 AAIGLGINVPQVFALTFAFGCGLAGLGGALGAEILGL--DPYFPLKFLIYFLIVVTVGGS 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S++    A+ +L                  +            ++   + ++++ R + 
Sbjct: 235 SSITGPFLASLLLGI--------------GDVAGKYYVPKLGAFVIYTMMIVILIWRPNG 280

Query: 339 LLRL 342
           L   
Sbjct: 281 LFGR 284


>gi|311109338|ref|YP_003982191.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310764027|gb|ADP19476.1| inner-membrane translocator 65 [Achromobacter xylosoxidans A8]
          Length = 290

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/284 (10%), Positives = 76/284 (26%), Gaps = 13/284 (4%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               +IY + A+G  +   + G L+     A  +GA   + L         ++  V    
Sbjct: 11  IALGMIYAVIAFGYQLTFATSGTLNFGQGEALMLGALVGLTLVGLGVNYWVMIPIVCIFG 70

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                ++  +              ++ +     I         G                
Sbjct: 71  FAQGALVERVGVRPAIKTRSEFGWIMATIALGIIFKNVAENIWG-----------RDDLR 119

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             S +                  V+ G   +   + ++ R++    A+    +++ A   
Sbjct: 120 FPSPLPEAPIQVLGANVLPMELLVVFGALAMMLLVEIFNRKSIYGKAFVATSNDRDAAGL 179

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +          ++A+SS     AG   A     ++         +   ++ I+GG++S  
Sbjct: 180 MGINTGMVITFSYALSSLTAAFAGVLVAPL--TLTGATMGAVLGLKAFAVAIIGGLSSGM 237

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            +     IL              +  +        +       +
Sbjct: 238 GVVVGGLILGIAETTTGFYLSTGYKDVPGLVLLLLVLTFKPAGL 281


>gi|167908894|ref|ZP_02495985.1| ABC transporter, permease protein [Burkholderia pseudomallei 112]
          Length = 340

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 60/327 (18%), Positives = 117/327 (35%), Gaps = 23/327 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+A +  L     +    +  Y        L   + A G++++   LGL+ L+    +
Sbjct: 16  LALVATLGTLAAIALVVPAVADAYWIKTLTSALTVSIAAAGVALLYRQLGLVCLSQHALF 75

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G +   +  +  G    L +   A    A GMI GLP+L+ RG YLA+ TL+M+  FQ
Sbjct: 76  GVGGWI-ALRLAHLGAPFELCVLAGAAGGSAIGMIAGLPALRLRGLYLALVTLMMAGGFQ 134

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++        G                +    R           +   +  +     L+
Sbjct: 135 VVVSAIGFPDGGGG----------FTGHLSFGARQMMARPLVGQSDAAYFRYVAAWAALA 184

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++I   RR+    +W  IR  +    +    ++F +  AF ++    G++G   A S  
Sbjct: 185 FALIELHRRSKAGRSWALIRRGEMPALAAGVNVVFYQTWAFGLAGLLAGLSGGLLAGSVG 244

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           ++    F  SE++++ ++ ++GG+           +L  V  L                 
Sbjct: 245 QLDGRAFAASESVLLFALSVVGGVYHWFGALITGLLLRAVPALLTDFG------------ 292

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                       AL   ++     +  
Sbjct: 293 VNGYLAMIFFGAALLHALVTAPAGIAG 319


>gi|118431911|ref|NP_148667.2| branched-chain amino acid ABC transporter, permease protein
           [Aeropyrum pernix K1]
 gi|116063234|dbj|BAA81538.2| branched-chain amino acid ABC transporter, permease protein
           [Aeropyrum pernix K1]
          Length = 289

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 89/304 (29%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I    +    Y + A GL+++ G + +++        +GA +     +  GL       +
Sbjct: 10  IVDGLLIGGAYALVAMGLAMIWGVMEIINFAHGDFMMLGALAAYYAFTLMGLDPLAGGVL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++  A G+ +    +    D   +  +  +     I+        G            
Sbjct: 70  AFVMVFALGVGVQRGVINRILDAPLLTQIAATFAVLLIIRYGVQAVLGP----------- 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               + +  + +     F    +    + L    + A + + L RT +  A R    N+ 
Sbjct: 119 YTRRLVTWYQDYYVGLGFTTVPLSKLLIFLVSLVILALLYILLNRTDMGIAIRATSQNRM 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F +      + GA  A                +I    V+LGG 
Sbjct: 179 VAQLMGINVSRVYDVTFGIGVGVAAVGGALVALFYPI--FPEMGGFFALIAFIAVVLGGF 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        I+     +           ++ F             +   L+I+++   
Sbjct: 237 GNVYGAYVGGLIIGVTESVSALFIEPALKDVVAF-------------LLFILIIMIKPTG 283

Query: 339 LLRL 342
           L   
Sbjct: 284 LFGR 287


>gi|126462340|ref|YP_001043454.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
 gi|126104004|gb|ABN76682.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
          Length = 431

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 53/315 (16%), Positives = 107/315 (33%), Gaps = 22/315 (6%)

Query: 50  VMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMI 109
            + A  +        +         AI    Y       GL + L  P   +++      
Sbjct: 118 ALLAVLIGGFFAYRAIFDPAVAAIEAINPALYG-NIGGLGLPVLLAWPAGGLLAALAAWA 176

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
           +G  +L  R DYLAIATL ++EI   ++     +  G   +    R       ++    F
Sbjct: 177 IGKTALGLRSDYLAIATLGIAEIIIAVMKNEDWLARGVKNMISLPRPVPYEVDLQQSAGF 236

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWL---------RRTAISNAWRTIRDNQKAF 220
             +   +    +    +++ +C+ +  + +            R+      R IRDN+ A 
Sbjct: 237 VAWAQGWGYDPVTASAIVVKLCYAALFVAVLAIIVTLSELALRSPWGRMMRAIRDNEVAA 296

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS-ENIIVISIVILGGMT 279
            ++   +    L  F + +A IG+AGA       +++P  +       +V  +VI+GG  
Sbjct: 297 EAMGKDVTRRHLQIFVLGAAVIGIAGAMMTTLDSQLTPGTYNPLRFTFLVWVMVIVGGSG 356

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR-----------HTTLMVIAL 328
           S         ++  +  +   +      ++       +                 M + L
Sbjct: 357 SNWGAVLGGFLIWWLWVMVEPIGLSLLGAITAGMADGSWLKAHLQDSAAHMRLLTMGLIL 416

Query: 329 FLVILMRSHSLLRLR 343
            LV+      L+  R
Sbjct: 417 LLVLRFSPRGLIPGR 431



 Score = 36.8 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 27/69 (39%)

Query: 31 GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
          G  +S      +    LI  + A G+++  G  GL ++  +   A+G  + V+  ++   
Sbjct: 19 GVLQSWNSALGILNMALISAIMALGVNMQWGYAGLFNVGVMGFVALGGLAVVVTAAQPVP 78

Query: 91 SIWLLIPVS 99
            +      
Sbjct: 79 GAFAAGGWG 87


>gi|238787015|ref|ZP_04630815.1| Inner-membrane translocator [Yersinia frederiksenii ATCC 33641]
 gi|238724803|gb|EEQ16443.1| Inner-membrane translocator [Yersinia frederiksenii ATCC 33641]
          Length = 348

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 100/332 (30%), Gaps = 25/332 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLG-----ATKSQKYIDSMGIQILIYVMFAWG 55
           MS    +L K   I  ++  +  +  FL           +   +  + +Q+ I  + A G
Sbjct: 23  MSGLKGKLPKDTGIFIVMIGIALIFEFLGWFIRDQSFLLNPNRLLLIILQVAIIGIIAVG 82

Query: 56  LSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           ++ V+ + G + L+     A+ A     L                 IS     ++ LP++
Sbjct: 83  VTQVIITTG-IDLSSGSLIALTAVVAASLAQTTDS-----------ISPMYPHLLDLPAV 130

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                 + +  L        I     P      G+ V+ R      T  + + F     +
Sbjct: 131 VPITAGIGVGILCGFINGFLITRTGIPPFIATLGMMVSARGLAQYYTKGNPVSFLSDDFT 190

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
            +        + L +        + L+ T        I  N  +       +    ++ +
Sbjct: 191 AIGQGAMPVIIFLVIA---VIFHIALKHTRYGKYVYAIGGNMISAKVSGINVNKYLVTVY 247

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAI 290
            ++    G+AG   AA        M +  E   + + VI     +GG+  ++       I
Sbjct: 248 TIAGGLAGLAGVVLAARVSSGQSSMGQSYELDAIAAAVIGGSSLMGGVGRITGTVIGAVI 307

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           L  +      +    +   +            
Sbjct: 308 LGLIKSGFTFIGVDSYIQDIIKGIIIVSAVAI 339


>gi|163792463|ref|ZP_02186440.1| inner-membrane translocator [alpha proteobacterium BAL199]
 gi|159182168|gb|EDP66677.1| inner-membrane translocator [alpha proteobacterium BAL199]
          Length = 313

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/317 (11%), Positives = 80/317 (25%), Gaps = 17/317 (5%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                + + S      +Y + A G  ++  + G+ +          A  +V         
Sbjct: 4   FWFFLEVLLSGLFAGTMYSLVALGFVLIFKASGVFNFAQGTMVLFAALCFVGFLEMGWPV 63

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
               I    ++      +  L           I  +    I   +    + I        
Sbjct: 64  AVAAIVTVGIMVAWAYSVERLVLRHLVNQAPIILFMATIGIAFFLEGFAEFIWGSDVHPL 123

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                              +           +             + L+   T I  A R
Sbjct: 124 NVGIPNDAWFVGPEGEMMIQQFDLAAAIIAGLLV---------TVLALFFHYTRIGRALR 174

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            + D+ +A  S+   +    +  ++V+     +AG  + +               +  + 
Sbjct: 175 AVADDHQAALSVGIPLNQIWVIVWSVAGFVALVAGIIWGSRLGVQFALS---IIALKALP 231

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT-----LMVI 326
           ++ILGG TS+        I+    +L           L+ +    N             +
Sbjct: 232 VLILGGFTSVPGAIVGGLIIGAGEKLAEIYGAPAIAELVSYMSGINNISLGGVEEWFAYV 291

Query: 327 ALFLVILMRSHSLLRLR 343
                +L R   L   R
Sbjct: 292 LAMFFLLFRPQGLFGER 308


>gi|156740563|ref|YP_001430692.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941]
 gi|156231891|gb|ABU56674.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941]
          Length = 293

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 90/268 (33%), Gaps = 13/268 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            S      I+ + A G  ++  S  +++        IGAY         GL   L + V+
Sbjct: 9   LSGVANGAIFALVALGFVLIYKSSDVINFAQGELLLIGAYLTYTTVEMIGLWWPLGVIVA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             ++   G+++    L+       I+ ++++    ++L        G         L   
Sbjct: 69  VALAALVGVLIEQMVLRPLIGEPVISVIMVTIGLSSLLRAIIGAIWGVTPRTAPQFLPRD 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                                +   +       L A + L+ R +    A R + D+Q+A
Sbjct: 129 T-----------IALFGASVSVDRLWAFALALTLFALLTLFFRYSREGIAMRAVADDQQA 177

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             S+  ++      A+A+++    + G    +    +S  + +     +V  +VILGG+ 
Sbjct: 178 ALSMGISVKKVWAVAWAIAAVTASVGGILLMSIFGGVSGQIARVGL--LVFPVVILGGLD 235

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFN 307
           S+        I+  +     G       
Sbjct: 236 SIPGAIVGGLIIGLLQSFAGGYLPPELG 263


>gi|33599391|ref|NP_886951.1| putative branched-chain amino acid transport permease [Bordetella
           bronchiseptica RB50]
 gi|33566987|emb|CAE30900.1| putative branched-chain amino acid transport permease [Bordetella
           bronchiseptica RB50]
          Length = 329

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 59/314 (18%), Positives = 113/314 (35%), Gaps = 23/314 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A     +L L L          S    ++++V  A  ++I VG  G L    V+ Y +G
Sbjct: 27  IATGIFAVLTLSLAVVPMATSNISFAFYLMLWVTMASAMNICVGFTGYLPFGFVVFYGVG 86

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  I     G  I   +  ++++     ++   P+L+ RG Y  I +L ++ I + ++
Sbjct: 87  AYATGICYKVLGWPILPSLAAASVVGLLIALL-FAPTLRLRGVYFGIVSLALATIMRLLI 145

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                   G +                          S        YY +L +   + + 
Sbjct: 146 SNLPDGFTGGS---------------------MGLILSSANSPTHSYYAMLAVMAATLAT 184

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           + WL  + +  A + IRD+  A   +   +   +L A+ +++ F  +AG   A   + + 
Sbjct: 185 VAWLSVSRLGKALKAIRDDDAAAACVGIHVPRTRLKAWLLAALFPALAGGIEAWYTNVVD 244

Query: 258 PD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P+  F        I   + GG  ++      T  L+G+  L           LL      
Sbjct: 245 PEYAFHVLITAKSIIYAMAGGFGTIIGPVVGTLALLGIDHLIWQKFPVLNLLLLGLVIVL 304

Query: 317 NMRHTTLMVIALFL 330
            M      ++   L
Sbjct: 305 LMLFLPRGIVGSLL 318


>gi|86140098|ref|ZP_01058661.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85823193|gb|EAQ43405.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 333

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 42/336 (12%), Positives = 107/336 (31%), Gaps = 17/336 (5%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           RL  Y  +L +  +     L +   A+     +  + + ++I+ + A GL++V G + ++
Sbjct: 9   RLGPYMPVLLVPLLALAGFLAIMNPASWLTLTVSGLAMGMMIF-IMASGLTLVFGLMDVI 67

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           +       ++GA+  + +    G        +  + +    ++  + +    G       
Sbjct: 68  NFGHGAFVSVGAFVGITVLMTLGHMTQAPSLMLNLGAVLLAVLGAMLATGAMGWAFEKVI 127

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR-FPSSFVIYEIFMYY 185
           +          I             +                       +    E +   
Sbjct: 128 VAPVYGHHLKQILVTMGGLIVVEQLIIVLWGPEEIYFNRPEALKGAITFAGAAIEKYRLV 187

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            +     + A++   LRRT I    R   +N +   +L   +    +  F   SA  G+ 
Sbjct: 188 AVAVGLAVFAAMRWVLRRTKIGLIVRAGVENGEMVQALGYRLKLVFVGVFIAGSALAGLG 247

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  +A  ++ I+  M      I++  +VI+GG+ S+        ++  +      +    
Sbjct: 248 GVMWALYQEVITAHM-GNHAMILIFIVVIIGGLGSVEGCFIGALLVGLMQNYIAFIE--- 303

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                              +  +  +++ R   ++ 
Sbjct: 304 -----------PKAALISNIALMVTILMWRPMGMIP 328


>gi|254500350|ref|ZP_05112501.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222436421|gb|EEE43100.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 310

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 50/317 (15%), Positives = 110/317 (34%), Gaps = 22/317 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             + +  I  L+  M + GL+++   +G+L+      Y +GAY             W+ +
Sbjct: 6   FSLLNGVIYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAY--TIGSVTGFWIAL 63

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ ++ G  G  +    L+       +A L+ +     ++ +   I  GK  +      
Sbjct: 64  FLAPILVGLAGAGIERWGLRKVHANGHLAELLFTFGLAYLIDELVKIIWGKIPVPY---- 119

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + + + F  F      Y  +  ++L     + A +   L+RT      +    +
Sbjct: 120 -----EIPAALDFPLFTLFGAQYPAYRIFMLGVSIAMLAGLWFLLKRTRAGLIIQAALTH 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 L   +    +  F    A  G+AG         ++      S   IV  +V++G
Sbjct: 175 PHMVGHLGHNVPRVFMMVFGFGCALAGLAGVIGGNYL--VTEPAMALSIGPIVFVVVVVG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF------- 329
           GM SL     A+ ++  +      ++  +         +       + + +L        
Sbjct: 233 GMGSLEGAFIASLLIGLLQTFAISIDTTFAEIFAFTGLNPLSDLGGISIASLAPMLPFLL 292

Query: 330 --LVILMRSHSLLRLRT 344
             LV+++R   L+  R 
Sbjct: 293 LVLVLMIRPRGLMGERE 309


>gi|187924242|ref|YP_001895884.1| sugar ABC transporter ATPase [Burkholderia phytofirmans PsJN]
 gi|187715436|gb|ACD16660.1| Monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
          Length = 351

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 99/324 (30%), Gaps = 38/324 (11%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +   +L  L      +     ++  QI   V+ + G++ V+   G + L+     
Sbjct: 51  LAGALLGMIVLFSLLSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAG-IDLSVGSVL 109

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GA    +   ++G        +    +   G I G  ++ +R       +L + E  +
Sbjct: 110 ALGASVVSVAALKWGWGPLPSAVLGVAAAALTGTITGAVTVGWRIPSFI-VSLGVLEAAR 168

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  +         G                      F        + +    L    + 
Sbjct: 169 GMAYQMTNSRTAYIGDA--------------------FDFLSNPIALGISPAFLIAVAVM 208

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L RT        I  N++A           K+  FA+  A  G+A  F  +  +
Sbjct: 209 VIAQLVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKVIVFALMGALSGLAALFQISRLE 268

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+  +  E  ++ ++VI     +GG  S+        I+  +               
Sbjct: 269 AADPNAGQGVELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLA---------- 318

Query: 310 LKFDCSFNMRHTTLMVIALFLVIL 333
            +   +   +      + +  V+L
Sbjct: 319 -QIGANEPTKRMITGAVIVVAVVL 341


>gi|170740509|ref|YP_001769164.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168194783|gb|ACA16730.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 293

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 50/290 (17%), Positives = 104/290 (35%), Gaps = 13/290 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    Y +FA G +++ G +G+++L   + +A+GA++ +      GL I   +PV
Sbjct: 6   LVNGVVLGATYALFAVGFTLMFGVMGVINLTYGVYFALGAFAALWTTQGLGLGIAAALPV 65

Query: 99  SAMISGACGMIMG--LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            A+++G   + +   L +   R     +A+L+++      L        G         +
Sbjct: 66  GALVAGLVAVAIDSLLLTRLRRAKAPELASLMVTLGATLFLYAGMAAWLGTEIRRFPAAI 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           +  G                V        ++       A+++  +R + +  A R + +N
Sbjct: 126 FDGGAY----------SLGSVRVGTTQLLIIGAAFLFVAALLALVRGSRLGLAIRAVAEN 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   +             +S A  G AG     + + I P M      +   +++I+G
Sbjct: 176 PEAAALMGINGGLMVRVVSFLSGAIGGAAGVLVGLNFNAIQPFM-GEHMMLRGFAVIIVG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           G+  L     A  +L     L        F  L  F           M +
Sbjct: 235 GLGDLRGALVAGLLLGFAEVLTAAYISSTFKDLTAFALLVATLWFRPMGL 284


>gi|85704619|ref|ZP_01035721.1| branched-chain amino acid ABC transporter permease protein
           [Roseovarius sp. 217]
 gi|85671027|gb|EAQ25886.1| branched-chain amino acid ABC transporter permease protein
           [Roseovarius sp. 217]
          Length = 301

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 95/303 (31%), Gaps = 18/303 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +  + A GL+++ G + +L++     YAIGAY+ V L   +    +     
Sbjct: 10  LFDGVAYAALVFIVALGLTLIFGVMRILNVAHGSLYAIGAYTTVSLVGYFLALGFAPAFA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++  +  ++  +       +Y  +  +        +L+ +      +    +      
Sbjct: 70  FPLMIVSAILVGIVIGAPL--EYFLLRRIYQKSEVLQLLVTFAVFMILEDVQRLVWGTQP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +    +               +  + L    L   +  +LR T I        ++++
Sbjct: 128 YFNSSALQVLGNVTVFGVTYTAYQLILLPLIAVVLLLGMRFFLRHTIIGKLITATTEDRE 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+        L  F + +   G+ GA  + +   +          ++  ++V   G+
Sbjct: 188 AAQSIGIDADRVFLFTFVIGAVLAGLGGALASPTTSIL--PGMGADMIVLSFAVVATAGL 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +   A    ++         +              +      +  + + LV+L+R   
Sbjct: 246 GQIEGAALTALMIGLGRSFAVYL--------------YPEISVLVPYLIMVLVLLVRPEG 291

Query: 339 LLR 341
           L  
Sbjct: 292 LFG 294


>gi|187920169|ref|YP_001889200.1| monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
 gi|187718607|gb|ACD19830.1| Monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
          Length = 343

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 45/285 (15%), Positives = 93/285 (32%), Gaps = 11/285 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            VV  +   L   A  S   + ++ +Q+          + V+   G + L+     A+  
Sbjct: 33  LVVLIVAFSLTSAAFFSVGNLMTVALQVTSIAYLGVAATCVI-ITGGIDLSVGSVLALAG 91

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
            +  +L          ++    + +    +      +   G    IATL M  + + + +
Sbjct: 92  VAAALLVKAGVPIPVAMLGGMLVGAACGWV--NGICVTRMGLPPFIATLGMMLVARGLAL 149

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +                L        S I    FP +       + Y ++ M  L A++ 
Sbjct: 150 QITGARPVSGLGDAFGELGNGALFRISHIGADGFPDT---VFPGIPYPVVIMVVLFAAVS 206

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L RT++      +  N +A       +   KL  + +S    G  G    +      P
Sbjct: 207 ILLSRTSLGRHIYAVGSNAEAARLSGVNVQGVKLFTYVLSGLLAGATGCVLMSRLVTAQP 266

Query: 259 DMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +     E   + S VI     +GG+ ++S  A    ++  +    
Sbjct: 267 NEGVMYELDAIASAVIGGTSLMGGVGTISGTAIGAFVIGVLRNGL 311


>gi|217978163|ref|YP_002362310.1| inner-membrane translocator [Methylocella silvestris BL2]
 gi|217503539|gb|ACK50948.1| inner-membrane translocator [Methylocella silvestris BL2]
          Length = 301

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 102/310 (32%), Gaps = 21/310 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-WLLIP 97
           I +      ++V+ A GL++  G + ++++       +G Y   +           L+  
Sbjct: 11  IFNGFSVASLFVLAALGLALSFGLMRVINMAHGEMLMLGGYLAYLTLLVVPGPFGILVAM 70

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             A I  A    +   ++  R     + TL+ +     IL +      G  G+ V     
Sbjct: 71  PVAFIGAALVGAVIESTVIRRLSSRPLDTLLATWGVSLILQQAARNIFGAIGVGVTAP-- 128

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                +    R      + +       ++L     + A + L + +T I    R +  ++
Sbjct: 129 ---EWLNHSFRVESGLLAGLNLPATRIFILAVAIVVLAGLGLLMAKTRIGLLVRAVNQDR 185

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +    +    L+ F + +   G+AG   A             +  I    +VILGG
Sbjct: 186 FMAGASGINVRQVDLAVFCLGAGIAGLAGVVLALLGPV--TPNVGQTYIIPAFLVVILGG 243

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + SL     A+ ++     L                         L+++ +   I  R  
Sbjct: 244 LGSLVGTTIASVMVGLFSALVQIFVD-------------VSMSQVLLLLFVIAFIQFRPQ 290

Query: 338 SLLRLRTPSN 347
            ++ +R+ + 
Sbjct: 291 GVIAVRSRAL 300


>gi|153011738|ref|YP_001372952.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
 gi|151563626|gb|ABS17123.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
          Length = 288

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 100/303 (33%), Gaps = 23/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +       Y + A GL+++   + +L+      Y +G +    +  + GL   + +  
Sbjct: 5   IANGLYLGAQYALIALGLTLIFALMNVLNFAHGQMYVLGGFVTYTVYGQLGLPFVVALLA 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           SA+     G ++     +           ++    ++                V   L+ 
Sbjct: 65  SAVTLMIVGALIEKFLFRP----------VIKRSLRDESTMLLAAAVAFFLDAVILLLFG 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    F S  +I       + +      A+ +L+++ T    A R +  ++ 
Sbjct: 115 EKQRGVPKIVNGVFVSDSLIMPYDRILIGVLAVVFIAAFVLFMQYTKPGRAMRALAQDRV 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    +  FA+ +   G+ G    A     S      + +I    +V++GG 
Sbjct: 175 AAQLMGVNVDRYSMIGFALGAMLAGLVGGLLVAITGVNS--GIGGAISIKAFMMVMIGGA 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +S       IL  +  +            L    S+      ++  AL + + +R + 
Sbjct: 233 GVVSGAIAGGFILGMMESV-----------GLTVLRSYGDITYLVIFAALMVFLSIRPNG 281

Query: 339 LLR 341
           L+ 
Sbjct: 282 LMG 284


>gi|113970325|ref|YP_734118.1| inner-membrane translocator [Shewanella sp. MR-4]
 gi|113885009|gb|ABI39061.1| inner-membrane translocator [Shewanella sp. MR-4]
          Length = 405

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 91/296 (30%), Gaps = 27/296 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +  +  +     + + G+S+V+   G + L+     AI       L     +S+  +I  
Sbjct: 97  LIDILNRSAPVALLSIGMSLVIA-TGGIDLSVGAVMAIAGAVCANLLLVPDISLVTVIAA 155

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++    G I G          +    L+M                  AG  VA  +  
Sbjct: 156 GLIVGLLAGCINGGLVSFLGIQPIVATLLLM-----------------VAGRGVAQLINQ 198

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                     F        +      ++++GM   S  ++   R+TA+      +  N K
Sbjct: 199 GQIITFQHPGFAAIGVGQFLGLPMPVWIVIGMLTFSQLLL---RKTALGLFIEAVGCNAK 255

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L       KL A+ ++     +AG    A       +       +  +  V++GG 
Sbjct: 256 ASRYLGINDKSIKLFAYGIAGLCAALAGMISTADIQGSDANNAGLWLELDAVLAVVIGG- 314

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
                 A        ++ +   +      + +         +  +  I +  V+L+
Sbjct: 315 -----AALTGGRFSLILSVVGALIIQTLATTIIVSGLPAKFNLLIKAIVILTVLLL 365


>gi|294853564|ref|ZP_06794236.1| branched-chain amino acid transport system permease [Brucella sp.
           NVSL 07-0026]
 gi|294819219|gb|EFG36219.1| branched-chain amino acid transport system permease [Brucella sp.
           NVSL 07-0026]
          Length = 289

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 84/303 (27%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y       + GL+    I ++
Sbjct: 9   VDALAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMIGGYFASYAAQQLGLNYGFAIIIA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + +    + +     +       +  ++M+      +I       G     +       
Sbjct: 69  VVGTMIIAVPVERLLYRRIYGAPELTQVLMTIGVTFCIIGITNYIFGPTLKTIPLP---- 124

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                  +        F        + +     ++  +   + RTA     R   DN   
Sbjct: 125 ------EMLRGSVDLGFRAIAKHRIFAIGCGLAVAVGLWYAVERTAFGVKLRAAVDNANM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +           +FA++       G   A          +     +  + +V +GG  
Sbjct: 179 AAAFGVRTEIVYAVSFALAIGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L  +      +                        +A+ +++ +    L
Sbjct: 237 SIPGALVACLLLGAIDTTGRYLA--------------PEYGEFFFYLAVIVIVTLFPRGL 282

Query: 340 LRL 342
              
Sbjct: 283 AGR 285


>gi|91781342|ref|YP_556549.1| ABC sugar transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91694002|gb|ABE37199.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia xenovorans LB400]
          Length = 341

 Score = 59.5 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 101/311 (32%), Gaps = 18/311 (5%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +     ++  +       +      +  +     +  + A   + V+   G + L+    
Sbjct: 33  LAFASLLLMLIFFSFASPSFMQMDNMLGILQATAVNGVLAIACTFVI-ITGGIDLSVGTL 91

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
               A    +  S + L +W  +  +      CG + G  + K +               
Sbjct: 92  MTFTAVICGVFLSSWHLPMWTGVVAAIGTGAICGTVSGTLTAKMKIPPFIAT-------- 143

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
               +    +  G + +  AD+  +   T             +++  + +   +L + FL
Sbjct: 144 ----LGMMMLLKGLSLVVSADKPIYFTDTENFYRISQDSLIGYIVPSLPIPNAVLILFFL 199

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +    + L RTA+      +  N++A       +   K++ + +S A  G+AG   A+  
Sbjct: 200 AVVSSITLNRTALGRYTFALGSNEEAVRLSGVNVDRWKIAIYGLSGAICGIAGLLIASRL 259

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +   P + +  E   + ++VI      GG  ++        I+  +      M+      
Sbjct: 260 NSAQPALGQGYELEAIAAVVIGGTSLSGGSGTMLGTIIGAFIMSVLTNGLRIMSVAQEWQ 319

Query: 309 LLKFDCSFNMR 319
           ++       + 
Sbjct: 320 IVVTGLIIILA 330


>gi|121610465|ref|YP_998272.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121555105|gb|ABM59254.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 704

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 91/299 (30%), Gaps = 21/299 (7%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
            +    S   +     Q     +   GL++V+   G + L+    +A+  +  ++     
Sbjct: 46  LIPNFHSPVMLADTLRQAGEIGLIVLGLALVMIVGG-IDLSVGSIFALTNFCALMCMHVL 104

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
              +   + V+ +     G + GL     +        + +                   
Sbjct: 105 KWPMAASVLVTLLAGALLGAVNGLLIGYLQLRAFLTTLITLIIF---------------R 149

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
            IY    L +      ++     +        + +  V      ++    + L R  I  
Sbjct: 150 SIYEILSLQYSTAIAGAVPDSAAWDFLGNGTLLGLPTVAWVYAVVAIGGHVLLTRLRIGW 209

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  ++++ ++    +       +  S    G AG FFA+       D+    E ++
Sbjct: 210 HIMAIGGSRRSAYNGGIAVRRTVALCYLTSGLLCGAAGCFFASRLATAGADIGVGMEVLV 269

Query: 269 VISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + V     + GG  S++K    T +++ +      ++     + +       +    
Sbjct: 270 LTAAVLGGISLGGGRGSVTKALVGTLLVLLITNGLTSLSAPGGVTRMVLATILVLAAVI 328


>gi|192292937|ref|YP_001993542.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|192286686|gb|ACF03067.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 301

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 101/306 (33%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A    ++  +  +++        IGA+    L ++Y L  W+ +P+
Sbjct: 14  LVNGLVVGTLYGVVAMSFVLIYKATQVVNFAQGELLLIGAWVCWTLLAKYQLPFWVGMPI 73

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+ + +  L+       I+ ++++     +         G            
Sbjct: 74  TLVFMFIFGIAVQIIVLRPMIGEPIISVIMVTIALSTVFQAALKWIFGVNPQP------- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +          +  +      L+    +   +  + R +    A R    NQ+
Sbjct: 127 ----FPQIFTTQSISIGGLQIQTVYVMSLVVSVAMMIGMAWFFRVSKYGLAMRATAFNQQ 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  ++      A+A+S+    +AG   A      S         I V    ILGG+
Sbjct: 183 VAQSLGISVKSVFAMAWAISATVSAVAGVVVAVVNGVSSGLSAY---GIKVFPAAILGGL 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +  +   ++  Y +            +       L ++++++ + 
Sbjct: 240 DSIGGAVLGGIIIGLLENIAQYVDSEYLHW--------GNLYEIAPFYVLIIILMIKPYG 291

Query: 339 LLRLRT 344
           L   + 
Sbjct: 292 LFGTKD 297


>gi|296163081|ref|ZP_06845854.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295886669|gb|EFG66514.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 359

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 99/324 (30%), Gaps = 38/324 (11%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +   +L  L      +     ++  QI   V+ + G++ V+   G + L+     
Sbjct: 59  LAGALLAMIVLFSLLSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAG-IDLSVGSVL 117

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GA    +   ++G        +    +   G I G  ++ +R     ++  ++     
Sbjct: 118 ALGASVVSVAALKWGWGPLPSALLGVAAAALTGTITGAVTVGWRIPSFIVSLGVLEA--- 174

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                             A  + +  T  R+      F        + +    L    + 
Sbjct: 175 ------------------ARGMAYQMTNSRTAYIGDAFDFLSNPIAVGISPAFLIAVAVM 216

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L RT        I  N++A           K+  FA+     G+A  F  +  +
Sbjct: 217 VVAQLVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKVIVFALMGGLAGLAALFQISRLE 276

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +               
Sbjct: 277 AADPNAGVGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLA---------- 326

Query: 310 LKFDCSFNMRHTTLMVIALFLVIL 333
            +   +   +      + +  V+L
Sbjct: 327 -QIGANEPTKRMITGAVIVVAVVL 349


>gi|312141343|ref|YP_004008679.1| branched-chain amino acid ABC transporter transmembrane protein
           [Rhodococcus equi 103S]
 gi|325673817|ref|ZP_08153507.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Rhodococcus equi ATCC
           33707]
 gi|311890682|emb|CBH50001.1| putative branched-chain amino acid ABC transporter integral
           membrane subunit [Rhodococcus equi 103S]
 gi|325555082|gb|EGD24754.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Rhodococcus equi ATCC
           33707]
          Length = 285

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 90/300 (30%), Gaps = 28/300 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                +YV+ A G +IV  S    +        +G +          L + ++  ++ + 
Sbjct: 8   LALGAVYVLVAIGYNIVFVSSNTFNFAQAQLMMVGTFVAYTGLVTLKLPVLVVAVMATVT 67

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 I  + +++   D+               L     +      I+ ++ L      
Sbjct: 68  VMVLAAIEEVVAIRPVADH--------QNQLVTTLGAATLLNGATQLIWGSEPLTVPFFG 119

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               I      +  V   + +  ++L       ++    +RT    A   + ++++A   
Sbjct: 120 SNDPITLLGGRTYPVEIALLVLSIVLV-----IALGQLSKRTMTGLALMGVSEDREAAML 174

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
               +    + AFA S A  G+ G F       +       +  +     + +GG  SL 
Sbjct: 175 RGVNVRRIAMGAFAFSGALAGVLGLFVGPKTFAV--ATLGAALALKGFVALAIGGFGSLP 232

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   +  V           +++               + + L ++++++   L   
Sbjct: 233 GALIGGLTVGLVESFTALWFGSQYSN-------------IAVFVVLIVILMVKPAGLFGT 279


>gi|251790912|ref|YP_003005633.1| inner-membrane translocator [Dickeya zeae Ech1591]
 gi|247539533|gb|ACT08154.1| inner-membrane translocator [Dickeya zeae Ech1591]
          Length = 346

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 99/310 (31%), Gaps = 15/310 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  +          +++ I ++  ++ IY + A G++ V+ + G + L+     
Sbjct: 33  VFIFMILLLIFFQSQNSNFLTERNITNILTEVSIYGIMAVGMTFVILTAG-IDLSVGSIL 91

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +   +              +    G   ++     L        +  L ++   +
Sbjct: 92  AVCAMTAAYVIKGDN----FTTVDAQAWGGMSWLVGLGICLAMGTVIGFLHGLGVT---R 144

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L  +     G         +   G  +      +R+     +  + +   +  +  L 
Sbjct: 145 LRLSPFIVTLGGMTIWRGLTLVVNDGAPIAGFDPGYRWWGRGELLGVSIPIWIFALVALV 204

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + L   +T        I  N +A       +    +S + V  A  G+AG   +A   
Sbjct: 205 GWLAL--HKTRWGRFVYAIGGNTEAARLAGVNVQRVLVSVYVVIGALAGLAGFILSARLG 262

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                     E  ++ S+VI     +GG   +S     + I+  ++     MN   +   
Sbjct: 263 SAEAVAGISFELRVIASVVIGGTSLMGGYGRISGTIIGSVIMGILINGLVLMNVSAYYQQ 322

Query: 310 LKFDCSFNMR 319
           +       + 
Sbjct: 323 IITGLIIVLA 332


>gi|313126791|ref|YP_004037061.1| amino acid/amide ABC transporter membrane protein 1, haat family
           [Halogeometricum borinquense DSM 11551]
 gi|312293156|gb|ADQ67616.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Halogeometricum borinquense DSM 11551]
          Length = 315

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 94/320 (29%), Gaps = 14/320 (4%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY----SY 81
           L + L      +++ +  +   + V+ + GLS+V       +        +GA+    S 
Sbjct: 3   LLVPLQGLNPAQFLVNGIVFSSVIVLASIGLSLVYSIADFANFAHGDTMTVGAFGALASA 62

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +L       +    PV   ++   GM      +      +       S       I   
Sbjct: 63  GVLAPAMEGILIFGFPVWMFVALLVGMAAAAVVVVLTEFVIYRPLDTGSIELLITSIGVA 122

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
                   +         G      I   R   +  +    +  V+  +  +   + L L
Sbjct: 123 LAYRAVIFLAFGTGSSRYGVPREGPIPVLRELFNIAVTPRQVVAVVSALVLVGT-LHLVL 181

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
           + T +    R   D+               ++ + +  A     G F     + +     
Sbjct: 182 QYTTLGRKMRATADDPNLARVSGIRTKEVIIAMWVIGGALAAAGGVFLG--LETLIHPRM 239

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            F   +IV + VILGG+ S+        ++  + EL    +                   
Sbjct: 240 GFDILLIVFAAVILGGIGSVYGAMLGGLVIGLLYELTPLFSLVGIPIG-------TEYAA 292

Query: 322 TLMVIALFLVILMRSHSLLR 341
            +  + + +++L+R   +  
Sbjct: 293 AVAFVIMVVILLVRPQGIAG 312


>gi|187919896|ref|YP_001888927.1| monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
 gi|187718334|gb|ACD19557.1| Monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
          Length = 333

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/316 (11%), Positives = 83/316 (26%), Gaps = 26/316 (8%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           ++   +    A++  +  F       S     ++G Q  +  + A G++ V+     + L
Sbjct: 33  DRPYALYAAFAILLVVFSFA-SPWFLSIDNFLNIGRQTALVSIIAIGMTFVI-IARQIDL 90

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+   S  +  +  G +  +            G I G+ + +            
Sbjct: 91  SVGSTLALSGMSAALAMAYVGNNWVIGAIAGIGTGAIVGAINGIVTTRVNIPSF------ 144

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                         +T G         L    T    +                +   ++
Sbjct: 145 -------------LVTLGTLSAARGLALMVTTTKPVIIDNDSFISIFGEGDIFGVPVPII 191

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
                  + IL L  +           N  A              AF ++    G+A   
Sbjct: 192 WTLLAVIAGILLLHYSVFGRQIYAAGGNPTAALYSGINTRRVTTLAFILTGMLAGLAALV 251

Query: 249 FAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNF 303
            +A      PD+ +  E  ++ S+      + GG   +      + I+  +      +  
Sbjct: 252 LSARSHAARPDVVQGMELDVIASVTLGGCSLFGGRGFVLGTLLGSLIIGTLNNGLVLLGV 311

Query: 304 YYFNSLLKFDCSFNMR 319
                L+         
Sbjct: 312 SSSLQLVIKGVIIVAA 327


>gi|56709083|ref|YP_165128.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56680768|gb|AAV97433.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 289

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 96/295 (32%), Gaps = 26/295 (8%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG- 107
           Y M A GL+++   + +L+      Y IG +       ++G+   L + +S +     G 
Sbjct: 15  YAMIALGLTLIFALMNVLNFAHGQMYVIGGFVTYTFYGQWGIPFVLALVMSCVTLAILGA 74

Query: 108 -MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
            +   L +   +G     +T++++      L     +  G+               V  +
Sbjct: 75  LIEKFLFAPVIKGSAREESTMLLAAGIAFFLDALILLIFGEK-----------QRGVPKI 123

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
           +         +I       + +       + I  ++ T    A R +  ++ A   +   
Sbjct: 124 VDGVFNWDFRIIMPYDRILICVLAILSIVAFIGLMQYTKTGRALRALAQDRTAAQLMGVN 183

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +    +  FA+ +   G+ G                   +I    +V++GG   +S    
Sbjct: 184 VDRYSMIGFALGAMLAGLVGGLLVTITGV--NLGMGGPTSIKAFMMVMIGGAGVISGAIW 241

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              IL  +  +            L     +      L+ ++L + + +R   L+ 
Sbjct: 242 GGIILGFMEAI-----------GLALLYQYGDITYLLIFVSLMIFLAIRPQGLMG 285


>gi|152977858|ref|YP_001343487.1| monosaccharide-transporting ATPase [Actinobacillus succinogenes
           130Z]
 gi|150839581|gb|ABR73552.1| Monosaccharide-transporting ATPase [Actinobacillus succinogenes
           130Z]
          Length = 345

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 89/299 (29%), Gaps = 9/299 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++        +    +   +  M   I I  + A G++ V+ + G + L+      
Sbjct: 20  FIALIIILAFFTFTVDGFLNPSSLIIMIKHISINALLALGITFVIITAG-IDLSIGAILG 78

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L S+  +     I  +   S    + + L      G          +     
Sbjct: 79  LCGMVAGYLISKGIVLPMFGI--AIFPSVWVIVPLVLLLGAILGGINGYIITRYNVAPFI 136

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             +    I  G A +  ++   F G +    +    F          + Y +  M  ++ 
Sbjct: 137 CTLGTMYIIRGAA-MLTSNGETFPGLSGNPQLGNTGFDIIGAGSLFGVPYSIWLMFIVAG 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I    ++         I DN++A       +   K+  + +S     +AG    +    
Sbjct: 196 LIAYTAKKLPFGRHVYAIGDNERAAELSGIKVNNTKVWVYVISGLCAALAGIVVTSQLVA 255

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             P      E   + ++V     + GG  ++        ++  + +    M    F  +
Sbjct: 256 SHPATGNAFEMNAIAAVVLGGTSLAGGRGTVGGTLIGAFVIGILADGLVMMGVSEFWQM 314


>gi|332671250|ref|YP_004454258.1| inner-membrane translocator [Cellulomonas fimi ATCC 484]
 gi|332340288|gb|AEE46871.1| inner-membrane translocator [Cellulomonas fimi ATCC 484]
          Length = 355

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/321 (9%), Positives = 91/321 (28%), Gaps = 29/321 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  L +V  + +        S   + ++     +  + + G++ V+ + G + L+
Sbjct: 44  RNLGLVIALVLVCVVGVVTAGDRFASIDNLMTILRLAAVLGVLSIGMTFVI-TGGGIDLS 102

Query: 70  CVIAYAIG---AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
                 +    A +             +++  +  +    G++ G+     +      AT
Sbjct: 103 VGSVVGLSSVWASTLATQAMADDFHWSVIVVTALAVGLGAGLVNGVLIAYGKVVAFI-AT 161

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L M    + +                      +      ++R   F        + +  +
Sbjct: 162 LAMMVAARGLA-------------------EMIANRQTQVVRVQSFLDVMRQDVLGVPVL 202

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +     ++    + L RT        +  N +A       +    +  +A++    G+ G
Sbjct: 203 VWIFAVVAVVGWVLLNRTTFGRRTVAVGGNPEAARLAGIDVRRHTMYLYALAGLAAGIGG 262

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
                     S     + E   + ++V+      GG  ++        I   +  +    
Sbjct: 263 VMMLGRTTAGSSTNGLYYELDAIAAVVVGGTLLAGGRGTIVGTVLGVLIFTTLTNVFTQN 322

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
           N       +       +    
Sbjct: 323 NLSISAQAVAKGVIIVVAVIL 343


>gi|149174976|ref|ZP_01853600.1| ribose ABC transporter (permease) [Planctomyces maris DSM 8797]
 gi|148846313|gb|EDL60652.1| ribose ABC transporter (permease) [Planctomyces maris DSM 8797]
          Length = 313

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 86/300 (28%), Gaps = 17/300 (5%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +++    S + +  +  QI +  + A G+++V+   G + L+     A+         + 
Sbjct: 17  IWVPTFLSPENMLDLTQQISVNTILALGMTLVILIGG-IDLSVGAMVALVG-----TTTV 70

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
           Y LS       +A       +     +  F   +   A       F   L          
Sbjct: 71  YCLSAISGDTQNAGYLLLSILAGLGVASLFGIFHGIAAAKTAMPPFIITLASMLIARGCA 130

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                   +         L          V         ++ M  L   + L L RT   
Sbjct: 131 LRFNSGLPISIGDQQTFLLAIGNGRLFDVVPVP------VVIMLTLFVLMALLLHRTRFG 184

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N++A       ++  ++  + + S   G+AG    +      P   +  E  
Sbjct: 185 QHVYALGGNREAALYTGIPVVRVEVMVYLICSVLAGIAGMIHTSQLYSAEPGSGEMFELT 244

Query: 268 IVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V+      GG  ++        I+  + +       +Y    +       +    
Sbjct: 245 AIAAVVVGGTSFTGGRGTIFGTLIGAVIIGILDKGLNQAGIHYSLQYIVKGAVILIAVYI 304


>gi|220931799|ref|YP_002508707.1| Monosaccharide-transporting ATPase [Halothermothrix orenii H 168]
 gi|219993109|gb|ACL69712.1| Monosaccharide-transporting ATPase [Halothermothrix orenii H 168]
          Length = 322

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 86/283 (30%), Gaps = 26/283 (9%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                 +   I ++GIQ  +  +   G++ V+ + G + L+      +      I  +  
Sbjct: 37  ASPYFLTLTNIMAIGIQTTVIAILGIGVTFVIITAG-IDLSVGSVLGLAGVITTISMANG 95

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
              ++L I    ++  A G + GL + K +                        +     
Sbjct: 96  IN-MYLSIIFGLLVGAAIGFVNGLVTTKGKIHSFIAT---------------LGMMGIAR 139

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G+ +        + + S   F      F  + + ++ +++        +     +T I  
Sbjct: 140 GLALIITGGIPVSGLPSEFDFMGAGKIFGFFPVPVFILIIVAIIAHLIL----SKTRIGR 195

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N +A       +    +  F +S     + G   A+      P      E   
Sbjct: 196 YTYAIGSNAEATRLSGVKVDKYLIIVFTISGLMASLGGIVQASRLVTGQPTAGTGYELDA 255

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           + + VI     LGG  S+        I+  +      +N   F
Sbjct: 256 IAAAVIGGTSLLGGEGSILGTIIGALIMGVLRNGANLLNISEF 298


>gi|85702843|ref|ZP_01033947.1| branched-chain amino acid ABC transporter (permease) [Roseovarius
           sp. 217]
 gi|85671771|gb|EAQ26628.1| branched-chain amino acid ABC transporter (permease) [Roseovarius
           sp. 217]
          Length = 289

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 99/302 (32%), Gaps = 27/302 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +         + A GL ++ G +G+++      +  GAY+ V L +   L  ++ +P+ 
Sbjct: 10  LNAVYAASYISLVAVGLVLIFGVMGVVNFAHGELFMAGAYAVVALYADMHLPFFVAVPIG 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +  G  G++M     +   D      +        +                       
Sbjct: 70  MLFVGMLGLLMEWGLFRPLKDNPLGGLVASIGFLMILQSLAVMGFG------------VR 117

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +  + +     +  V   +   YV++    L +++  +L+RT    A R    + +A
Sbjct: 118 MEHIPPVTQEVWRITDKVGVPVARLYVIVAAVVLLSALWYFLKRTRFGWALRASAQDPEA 177

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                 +I      A  + +A  G+AGA  A             S  +    ++I+GG+ 
Sbjct: 178 AALQGISITQTARIAMFIGAALAGVAGALTAPLVSV--NPHMGHSVIVTAFIVIIVGGVG 235

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           SL     A+ +   V       +      ++                 + +V++++   L
Sbjct: 236 SLEGAIVASVVYAFVHTFVTTFSDGVLADIVGLS-------------LMLVVLIVKPTGL 282

Query: 340 LR 341
             
Sbjct: 283 FG 284


>gi|70731036|ref|YP_260777.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68345335|gb|AAY92941.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas fluorescens Pf-5]
          Length = 320

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 54/304 (17%), Positives = 106/304 (34%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     +IY + A GL+I+ G L  ++      + +GAY           + WL + +
Sbjct: 43  ILNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFVLGAYICY-TAVSLTGNFWLALVL 101

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++  A   I+    ++       +  ++++     I+ +   +  G  G  VA     
Sbjct: 102 APLVVAALAWIIERLLIQRIYHLPHMFQILVTLGIALIIQEASVMIWGPVGKAVAVPELL 161

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                 +Y  +  +++L    +   + L L RT      R   ++ +
Sbjct: 162 RGV----------LVIGDFVYPYYRLFLILFSALVGLGLWLLLERTRFGALVRAGSESTE 211

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L T I       FA+  A  G+AG  FA  R              +   +V++GGM
Sbjct: 212 TVSLLGTNIFRLFSMTFALGVALAGIAGVLFAPLRGA--QPFVGPEILGVAFVVVVIGGM 269

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         ++  V  L   +              +    + ++  A+  VIL+R + 
Sbjct: 270 GSFGGALVGGLLVGVVQSLMTSL--------------WPQGASLMIYGAMAAVILVRPYG 315

Query: 339 LLRL 342
           L   
Sbjct: 316 LFGR 319


>gi|258512242|ref|YP_003185676.1| inner-membrane translocator [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478968|gb|ACV59287.1| inner-membrane translocator [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 309

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 41/320 (12%), Positives = 89/320 (27%), Gaps = 27/320 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             +Y     L  V+  L+L +      +   +  + +Q  +  + A G++ V+ + G + 
Sbjct: 4   FRRYRLGPLLGLVLLILILAVASRQFFTASNLLDIALQTSVNALLAIGMTFVILTAG-ID 62

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+ +                 I    + + A      L +      Y  +A  
Sbjct: 63  LSVGSTLALTSAIAAQWMVGGTSPWLAGISALCIGAIAGAFNGVLVA------YARLAPF 116

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I++     +      I      I+                  + F        + +   +
Sbjct: 117 IVTLGTMTLFRGLTEIYTNGQPIFNLP---------------YSFNGLGNGAVLGVPVPV 161

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                +     + L RT        I  N+K  +          ++ + VS     +AG 
Sbjct: 162 WITMIVFLIAWMVLSRTVAGRRIYAIGGNEKVAYLAGVRAKRYLVAVYVVSGILAALAGL 221

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
              +      P   +  E   + ++V     + GG  +L        IL  +      +N
Sbjct: 222 ILTSRLATAEPTAGQGYELDAITAVVLGGTSLFGGEGTLVGTIIGALILGVIDNGLNLLN 281

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F           +    
Sbjct: 282 VSSFYQDAVKGLVILIAIML 301


>gi|313664966|ref|YP_004046837.1| amino acid or sugar ABC transport system, permease protein
           [Mycoplasma leachii PG50]
 gi|312949514|gb|ADR24110.1| amino acid or sugar ABC transport system, permease protein
           [Mycoplasma leachii PG50]
          Length = 852

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/338 (10%), Positives = 91/338 (26%), Gaps = 11/338 (3%)

Query: 2   SIFSLRLNKY-DKILCLLAVVYPLLLFLFLGATKSQKYIDSM-GIQILIYVMFAWGLSIV 59
           S+FS+ +      I   L  + P   F  L      K    +    + +Y++    +++ 
Sbjct: 32  SLFSIIMGFIVSGIFLSLLKINPFTYFALLFGINFDKNFYQISLNWMAVYIVAGLSMAVA 91

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
               G+ ++      A G        S            + + +    +++    +    
Sbjct: 92  FK-SGVFNIG-----APGQILTATSVSTILFFYIKGPKTTTINASMIVLMLIACIISASF 145

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
             L    L        ++       +           +   +   S           VI 
Sbjct: 146 LALIAGILKALFNIHEVVSTILLNWSVFYIFKWFFNKFKDFSGGLSFTSKNIPSDQLVIG 205

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              +   LL        + +   +T +    + I  +      +   +    +S+ A+S 
Sbjct: 206 SNTVIIPLLIALICVILVWVLFSKTTLGFKLKAIGSSITGSKYIGINVKTQIMSSLALSG 265

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-LGGMTSLSKIAKATAILIGVVELC 298
           A  G+AG     +    +         +   +I + L    +   I     +   +    
Sbjct: 266 AIAGIAGFILIFTVTPNNFFASNSLPTVGFDAIAVSLVAFNNPIGIIPIGWLWAVIKTGG 325

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
             ++  Y  S         +         + + I+ + 
Sbjct: 326 GPVSSLYGISTQISGLISGV--LIYFTAIVSIFIVFKP 361


>gi|163857890|ref|YP_001632188.1| putative branched-chain amino acid transport system, permease
           component [Bordetella petrii DSM 12804]
 gi|163261618|emb|CAP43920.1| putative branched-chain amino acid transport system, permease
           component [Bordetella petrii]
          Length = 293

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 46/301 (15%), Positives = 97/301 (32%), Gaps = 21/301 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL+++ G +G+++L     Y IGAY    LG             +
Sbjct: 11  LNALQHGLLLFLVASGLTLIFGIMGIINLAHGSFYMIGAYMAFALGPLVDRWAAGGFAAT 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            ++      ++G         YL           Q +L+ +  I   +    +       
Sbjct: 71  LLLCVLLAALLGYLLEAAFFSYLYR-----RNHLQQVLMTYGLILVFEEVRSLLVGNDVH 125

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G  + + +         + Y ++  ++      ++  +   + RT +    R    N++ 
Sbjct: 126 GVPMPAWLSGTIPLGGVMTYPVYRLFISAVGIGVALLLYWVITRTRLGMMVRAGASNREM 185

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             SL   I       FA   A   +AG   A                I+   +V++GG+ 
Sbjct: 186 IGSLGIDINRLYRIVFAAGVALAALAGTIAAPVSSV--YPGMGHGVLIVCFVVVVIGGIG 243

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  ++  V      +              F      L+ + +  ++L +   L
Sbjct: 244 SIRGAFLAAMLVGAVETFGQVL--------------FPAAAGVLVYLLMAAILLCKPEGL 289

Query: 340 L 340
            
Sbjct: 290 F 290


>gi|77404665|ref|YP_345239.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|221218330|ref|YP_002524357.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
 gi|332561554|ref|ZP_08415867.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides WS8N]
 gi|77390315|gb|ABA81498.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|221163357|gb|ACM04323.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
 gi|332274056|gb|EGJ19374.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides WS8N]
          Length = 293

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 99/303 (32%), Gaps = 23/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +   Q + + + A GL+ V G L +L+L     + +GAY    +G  +  SIW  + V
Sbjct: 9   LFNGMAQGMAFFLVAAGLTWVFGILKILNLAHGAFFMLGAYIAYSVGGAWPASIWTFLAV 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + + A G++  L  +            + +  +   LI    +     G+  A     
Sbjct: 69  ALVAAAAVGVLGYLTDVLV-------LRRLRNVDYHYALIATFGLMLFCEGVAKAIWGTD 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +                 ++  +V+     L A++ + + RT      R + ++  
Sbjct: 122 YFAVMPPPEVDRAIVVGGSYISVYTLFVIGTGLVLYAALEIVMHRTWAGKIMRAVSNDPW 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              ++   +    + +   S    G AG     ++         F         V++GG+
Sbjct: 182 MAGTVGINVPLVLMLSVVASFVLAGFAGGVLVPNQALSPHVGASFVLY--AFMAVVIGGL 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  +L  V                             + I L + ++ + + 
Sbjct: 240 GSIRGTFLACILLGIVESANATF--------------MAQYGGIAIYILLAVALVWKPNG 285

Query: 339 LLR 341
           L  
Sbjct: 286 LFP 288


>gi|329903087|ref|ZP_08273361.1| inner-membrane translocator [Oxalobacteraceae bacterium IMCC9480]
 gi|327548496|gb|EGF33165.1| inner-membrane translocator [Oxalobacteraceae bacterium IMCC9480]
          Length = 286

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 92/303 (30%), Gaps = 28/303 (9%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +    A G S++ G + + +L+    + +GAY  + + +        L+   
Sbjct: 9   LNSLALGGVLFTLAAGFSLIFGLMRIANLSHGAYFMLGAYVGLSVINHGHNFFVALLAAG 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             +     ++  L   +  G+ L      +   F                +   D L   
Sbjct: 69  LAVGVLGAVVERLILRRLAGNSLGQVLATLGIAFIIADFSLWVWGGDPQPVDAPDFLAGS 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                             ++ ++   V+     L+ S+ L L +T +    R   D+ + 
Sbjct: 129 TQLF------------GQVFPLYRVGVVGFAILLAISLWLLLDKTRLGMMIRASVDDMQM 176

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +           F + +A  G+ G   A                 + + +VILGG+ 
Sbjct: 177 ARGIGIPASRLFTIVFCLGTALAGIGGVIAAPILSVYPGMDSDMLP--LALVVVILGGLG 234

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           SL+     + ++  +      +              F      ++ + + +++ +R   L
Sbjct: 235 SLAGAFIGSFVIGFIYSFGQAL--------------FPDLAYIILFLPMVVILAVRPRGL 280

Query: 340 LRL 342
              
Sbjct: 281 FGR 283


>gi|293607751|ref|ZP_06690082.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292813889|gb|EFF73039.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 301

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 88/302 (29%), Gaps = 18/302 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +  + + GL++V G +G+L++     YA G Y+   L            P 
Sbjct: 10  LVDGVAYASLLFLVSMGLTLVFGVMGILNVAHGAFYAFGGYAAASLVMFLAPK--TDSPF 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               S     I     L    +++ I      +    +LI +      +    +      
Sbjct: 68  LLFASLFVAAIAIGLVLGSIMEFVLIRRAQNYDPILKLLITFGGFLMLEDIQRMLWGAQP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +                    +  V +        +  +LR T +         N++
Sbjct: 128 YSASEVVNRLGNIEIGDITYTTYQLVVVPVTAVLAYVCLEFFLRHTKLGKQTVATTHNRE 187

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL           F +++    + GA  A +   +          ++  ++V   G+
Sbjct: 188 VATSLGINAKKIGYVTFVIATILGALGGALAAPTTSLV--PGAGTDMTVLSFAVVATAGL 245

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             ++    A  ++  +  +                 +       +  I + LV+++R H 
Sbjct: 246 GQITGALIAALLIGIIRAIAV--------------YAAPELEVAVPYIIMVLVLIIRPHG 291

Query: 339 LL 340
           L 
Sbjct: 292 LF 293


>gi|218778555|ref|YP_002429873.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218759939|gb|ACL02405.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 291

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 85/303 (28%), Gaps = 23/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             S      +Y + A GL++V G     +      Y++G Y   +L +  G+ IW     
Sbjct: 9   FISGLTNGSVYALMAVGLTLVYGVSKAFNFAYGSFYSLGGYLAWVLLA--GIGIWGGYIS 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +++    M  G  + K     L   +         I +    +             + 
Sbjct: 67  VFIVALPLLMAFGYVTEKLIVAPLRSRSD------WEIKVMMITLGLALFMDNFYQVAFG 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    +    ++       +L+       +    L  T I  A R +  N +
Sbjct: 121 SRMKSLPPIVDGVWDLGDIVISYQDIVILVLSVSGILAFRWILNNTRIGMAVRAVAQNPE 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +         + FA+S+  +G  G   A          +       VI+    GGM
Sbjct: 181 GARIVGIPKDRVFAATFAISTVMVGAGGVLLAQKYFVSPTGGWDILVKSWVITA--FGGM 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  IL  +           +                 +   L   + +R   
Sbjct: 239 GSIQGGLYAAFILGMLEAFVGYWFGMTWV-------------LFALFAVLLATLAVRPQG 285

Query: 339 LLR 341
           L+ 
Sbjct: 286 LMG 288


>gi|153007635|ref|YP_001368850.1| monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC
           49188]
 gi|151559523|gb|ABS13021.1| Monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC
           49188]
          Length = 331

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/326 (10%), Positives = 97/326 (29%), Gaps = 27/326 (8%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           S+FS  L +    + +   V  ++  +      +     ++  Q+ +  + A+G++ V+ 
Sbjct: 19  SLFSSPLIRQYGGIIISLAVLCVVFAVLNPRFLAFNNFMNIMQQVAVIAVAAYGMTYVI- 77

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
            LG + L+     A+         +     +  ++   A  +                  
Sbjct: 78  LLGEIDLSIGSIIAVSGMVAAQAFAMGFGFVPTVVFTLAAGAIMG--------------- 122

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                  ++ +    L+    I            +         +I    + +      +
Sbjct: 123 ------GLNGVLSAKLMLPSFIVTVATMGIYRGMVSLPTNGAPEIIENDTWLAIGSENWL 176

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +  ++  +  L     + L +T           N++A       +   K+  F +S   
Sbjct: 177 GLPIIIWIVGVLFIFNYILLSKTVFGRRIYLSGGNKEAAIYSGIRVDRIKIIVFMLSGVM 236

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVE 296
             ++G   ++       +     E   + ++V     + GG+ ++        I+  +  
Sbjct: 237 AAISGILLSSRLSSAQTNAGMGYELDAIAAVVLGGTSLAGGVGTMVGTILGALIIGVINN 296

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               ++  YF  L+       +    
Sbjct: 297 GMNMLSVPYFYQLIVKGVVILVAVWL 322


>gi|329926574|ref|ZP_08280987.1| ribose transport system permease protein RbsC [Paenibacillus sp.
           HGF5]
 gi|328939115|gb|EGG35478.1| ribose transport system permease protein RbsC [Paenibacillus sp.
           HGF5]
          Length = 322

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 98/300 (32%), Gaps = 25/300 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +   +      I ++  Q+ I  + A+G++ V+   G + L+     A+ +     +   
Sbjct: 37  VLNPSFLEPLNILNLLRQVSINALIAFGMTFVI-LTGGIDLSVGSILALSSAFVANMMVA 95

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                 L I +   + G  GMI GL   K +      ATL    IF+ + +         
Sbjct: 96  GFD-PILSIIIGVALGGVMGMINGLMITKGKMAPFI-ATLATMTIFRGLTL--------- 144

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                   +Y  G  +  L     F      Y + +    + M    A + + L +T+  
Sbjct: 145 --------VYTNGNPITGLGDSLVFQLFGRGYLLGIPVPAITMIITFAVLWVILHKTSFG 196

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                I  N+KA       +   K+  ++++     +AGA   +  +   P      E  
Sbjct: 197 RKTYAIGGNEKASLVSGIKVPRVKIMIYSLAGMLSALAGAILTSRLNSAQPTAGTSYELD 256

Query: 268 IVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V     + GG   +        I+  +      +    F  ++       +    
Sbjct: 257 AIAAVVLGGTSLTGGRGRIVGTLIGVLIIGILNNGLNLLGVNSFYQMVVKGVVIAIAVLL 316


>gi|284045390|ref|YP_003395730.1| ABC transporter [Conexibacter woesei DSM 14684]
 gi|283949611|gb|ADB52355.1| ABC transporter related protein [Conexibacter woesei DSM 14684]
          Length = 839

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 74/277 (26%), Gaps = 25/277 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
           GA  S   +  M   + +    A G  + +   G + L+                     
Sbjct: 547 GAYLSSVSLSGMLTLLTVLAFIALGQQMAMLIGG-IDLSVGPLAGFAVVVG--------- 596

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S ++     A  +    + M            A+A  I        L+ +  +       
Sbjct: 597 SFFVTEGAGAGGTALGFLAMFGACAAVGLVNFALARWIGMSPVIATLVTFTMLQG----- 651

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                L  L       +      ++      F+    L +C L+  +   LRRT +    
Sbjct: 652 -----LGLLLRETPDGVIDTSVATALGTTVGFVPIAFLIVCGLALLLEFGLRRTRLGLEL 706

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +  + +A  +L   +    + A+   S    +      A                 + 
Sbjct: 707 RAVGSDAEAAHALGARVERMNVLAYVGCSTLTFLGAVLLMAQVGIGDSTAGSTFTLSSIT 766

Query: 271 SIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
           ++V     I GG  S        A++         + 
Sbjct: 767 AVVLGGASIFGGRGSFLGALLGAALVQCATTATTFLG 803


>gi|90417898|ref|ZP_01225810.1| putative permease protein, ABC-type branched chain amino acid
           transporter transporter [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337570|gb|EAS51221.1| putative permease protein, ABC-type branched chain amino acid
           transporter transporter [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 297

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 94/304 (30%), Gaps = 22/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I  ++Y + A    ++  S  +++        +GA+  + L    GL  WL    
Sbjct: 10  VINGVIVGMLYGIVAMCFVLIYKSTQVVNFAQGEFVVLGAWVCLALVVSLGLPFWLAFIF 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +     G+++ +  L+       I+ ++ +      +        G            
Sbjct: 70  SLVFMTLFGILVQVLLLRPLVGEPVISVIMATIGLSIFMRALMNWIFGNN---------- 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +          +  E      L+    +      + R +    A R    NQ+
Sbjct: 120 -AVRFPQVFDRSTVSIGGLNVETAYLMSLVLSLIVMVIFFWFFRYSRWGLAMRATAYNQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL   +      A+A+S+   G+AG          +         I V   VI+GG+
Sbjct: 179 VAQSLGVNVGRVFAMAWAISAVVSGIAGVVIGLVSAVSNSLA---IIGIKVFPAVIVGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +  +  L   ++  Y              +       L +++++R + 
Sbjct: 236 DSIVGAIVGGLTIGLLENLAEFVDGQYL--------QVGNMYQVAPFYVLIVILMIRPYG 287

Query: 339 LLRL 342
           L   
Sbjct: 288 LFGT 291


>gi|116749115|ref|YP_845802.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
 gi|116698179|gb|ABK17367.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
          Length = 291

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 96/307 (31%), Gaps = 26/307 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ S      +Y + A G S++    GL++        +GA   + L    GL +   I
Sbjct: 6   QYVFSGVTNGSVYAIIALGFSMLFSMTGLINFAQGEFVMLGALGMISLWKGAGLPLPAAI 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +S +   A G+++   +++       I  +I++      L     I  GK         
Sbjct: 66  VLSTIGVSAVGLLLERAAIRNVRKPHPIVLVIVTIGASIFLRGAGMIGWGKESYSSPAFS 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                          F  +         ++L  +  +   +  + RRT    A      +
Sbjct: 126 RQGA-----------FEVAGATLLPQSLFILAAVLLIVFGLQFFHRRTLTGKAMLACAIS 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++A +          L AFA+S+    + G   A     +S      +  +      +LG
Sbjct: 175 KRAAWLQGIPSERLVLLAFALSAGMGAIGGILIAP--ISMSSYDMGMTLGLKGFCAAMLG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S              +    G                +     +  + L  ++ +R 
Sbjct: 233 GLGS-------------SLGAVLGGLLLGLLEAFGVGFFSSSLKDAIAFVLLLGILYVRP 279

Query: 337 HSLLRLR 343
             +L  +
Sbjct: 280 GGILGAK 286


>gi|330813764|ref|YP_004358003.1| high-affinity branched-chain amino acid transport system permease
           protein LivH [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486859|gb|AEA81264.1| high-affinity branched-chain amino acid transport system permease
           protein LivH [Candidatus Pelagibacter sp. IMCC9063]
          Length = 297

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 94/302 (31%), Gaps = 14/302 (4%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L +F       + +    +  +++ + A+G+++  G + ++++       +G Y    L 
Sbjct: 3   LLIFEHPILIIQALMDGVLLGILFALIAYGMALQWGVMNIINIAQGELVIMGGYVAYFLY 62

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
                  + +I    ++      I  L   K     L  + L    I   ++     +  
Sbjct: 63  MYGIHPAYGVIVSPIVMYFVGIGIYKLVINKVVDKDLFTSILATFGISILMMQLMNFVFG 122

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                             +S         + V       +        +  ++L+++++ 
Sbjct: 123 A------------DVVVAQSNFGTTMLFDNSVTLPNSKIFASAVSVLAAIVLVLYMKKSK 170

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +  A R    N +A   L         S F +++A  G+AGA  A               
Sbjct: 171 LGRAIRATAQNARAAKILGVDTEKVYASTFGINAALCGVAGALIA--ITFTLHPYVGLPY 228

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
            +    IVI+ G+ +L  +A +   L    E    +    F     F     +       
Sbjct: 229 TVRSFMIVIVAGLGNLPGVALSGMGLGVFEEFADYLLGTEFRIAAVFLLLVLILVYRRFK 288

Query: 326 IA 327
           +A
Sbjct: 289 LA 290


>gi|289644421|ref|ZP_06476501.1| ABC transporter related protein [Frankia symbiont of Datisca
           glomerata]
 gi|289505775|gb|EFD26794.1| ABC transporter related protein [Frankia symbiont of Datisca
           glomerata]
          Length = 917

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/237 (9%), Positives = 68/237 (28%), Gaps = 10/237 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            ++ +      +Y +   GL +   +  L +        I A+ +  L  ++ +   L  
Sbjct: 6   PFLVAGLTTGSVYGIAGLGLVLTYKTSRLFNFAHGALATIAAFLFYTLHVQHQVPWPLAA 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +  +++G    ++     +   D      +  +     ++     +  G A        
Sbjct: 66  LICVLVAGPVLGLVFELVGRMISDRSLPVRVAGTVGILLVVQAVISLVYGTAETRKVPPF 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             +          + +     + ++ L  R T    A + + D+
Sbjct: 126 LGTHV----------LRVANTSITQDKIIIWIIGAAATLALFLVFRHTRQGLAMQAVVDD 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
                   T+ +  +  A+ +  +F  ++G   A         +   +      + +
Sbjct: 176 VDLLNCAGTSPVRVRRLAWVIGVSFAALSGVLLAPLITLDGVTLTLLAVQAFGAAAI 232



 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 96/232 (41%), Gaps = 14/232 (6%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
              L   +    L ++V S G +SL  V   AIGA ++  L   +GL  +  + +SA+++
Sbjct: 335 TLFLTSTILFLSLGLLVRSSGQVSLCHVGFTAIGAAAFSHLTVGHGLPWFFALLLSALVA 394

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
              G I+ +P+++  G YLA+ATL    +   +      +           R        
Sbjct: 395 VPIGAILAIPAIRLSGLYLALATLGFGILLAYMFYTQDYMFGSIGAGLTEPRP------- 447

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                  R     +  +   YY++L    +  +I + L  + +    R + D+     S 
Sbjct: 448 -------RLGGLDLESDRGYYYLVLVFTVVVTAITVVLVHSRLGRLLRALADSPTGLASS 500

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
            T+    ++  F +S+     +GA   ++   ++ D ++   +++  S++++
Sbjct: 501 GTSTNVTRVLVFCISAFLAAASGALAGSAVSTVTADSYQPLTSLLYFSLIVI 552


>gi|170694842|ref|ZP_02885992.1| inner-membrane translocator [Burkholderia graminis C4D1M]
 gi|170140202|gb|EDT08380.1| inner-membrane translocator [Burkholderia graminis C4D1M]
          Length = 289

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 78/282 (27%), Gaps = 17/282 (6%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
               V+ A GL+++ G +G+++L        GAY  +I           ++  +   + A
Sbjct: 18  FAYLVLAALGLAVIFGMMGVINLAHGEFIMCGAYVTIITAKHGAPLPLAMLFGALAAALA 77

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
             ++  L               + +     I+ +   +  G +   +            S
Sbjct: 78  GVIVERLVIRHLYDRLFDSV--VATWAISLIVQQTMLLVAGPSIEGIGTPFGSFSLGEYS 135

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
              +        +  +F  Y+L               +T      R    N      L  
Sbjct: 136 FSTYRAVLPGIALAILFGLYLLFF-------------KTNYGVCARATIQNASIAQCLGL 182

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                    FA+ +   G+ GA +A +   +      F         V++GG   ++   
Sbjct: 183 RTDRLYTLTFALGAGLAGLTGALYAPTMTAVPTMGSNFIVQ--AFVSVVVGGANVIAGTT 240

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            A  +L  +           F  +        +       + 
Sbjct: 241 PAAGVLAIIQTALTASYGQLFGQIGLLVTVIVVIRLMPQGLG 282


>gi|92113545|ref|YP_573473.1| inner-membrane translocator [Chromohalobacter salexigens DSM 3043]
 gi|91796635|gb|ABE58774.1| neutral amino acid ABC transporter membrane protein
           [Chromohalobacter salexigens DSM 3043]
          Length = 289

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 48/302 (15%), Positives = 96/302 (31%), Gaps = 24/302 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   +  M A G+S++ G L            +GAY  +   S +GLS W  +P 
Sbjct: 8   LIYGLVLGSVLTMGAIGVSMIFGILRFAHFAHGDFMTLGAYLGLSFISAFGLSSWWALPA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +      + +     +       +  LI S     IL     +  G         + F
Sbjct: 68  AMVGMAVIAVFIDQVLYRRIRRTQPVILLIASFGMALILRSLVQLIWGSDNQTYTSGIQF 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +  +    +++L    L A + L+L RT +  A R + DN  
Sbjct: 128 PW---------RLDWLGGMRLKPDHLWIMLISLGLVAGVHLFLTRTRLGKAMRAMSDNMD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                        +  + +  A  G AG F     D     +  ++  + V +  ILGG+
Sbjct: 179 LALVSGIPAERVIMVTWVIGGALAGAAGVFLG--IDTRLHPVMGWTALLPVFAAAILGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                      I+   +E+   +    +   + F               +  ++++R   
Sbjct: 237 GRPYGAIAGGMIIGVSMEMSTLLIPAAYKPAVAF-------------AIMVGMLILRPQG 283

Query: 339 LL 340
           + 
Sbjct: 284 IF 285


>gi|171060357|ref|YP_001792706.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
 gi|170777802|gb|ACB35941.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
          Length = 291

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 83/306 (27%), Gaps = 26/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      IY + A G +++  + G ++        + A+  +   +     +      
Sbjct: 8   LFSGVATGSIYALAALGFTLLWQASGTINFAQGEFVMLPAFIMLGFAAMGLPLL------ 61

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A  +     +  L     RG    +    +  I    +     + NG    Y A+   F
Sbjct: 62  AAFAATCFVSVFVLGWAFKRGIADPLLKFGLMPIVVATIGLAIAMRNGIRAGYSAEAHPF 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L        +        + +LL +   +        +T    A + +  N +
Sbjct: 122 PSLFADKLFNIGGVTITLADVGTLAFALLLVLATQAFL-----NKTVTGRAMQAVAQNTE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           +   L   +       FA+++     A          ++                I+GG 
Sbjct: 177 SATVLGINVPRMVFYTFAINALLACAAALLVTP--TYLAKFDMGEGLGNKAFFAAIIGGF 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +         I+     L        +   +               +   +VIL +   
Sbjct: 235 NNSRGALLGGVIVGVAENLAAAYISPAYKDAVAL-------------VLFMVVILFKPQG 281

Query: 339 LLRLRT 344
           LL  + 
Sbjct: 282 LLGTKE 287


>gi|163852781|ref|YP_001640824.1| inner-membrane translocator [Methylobacterium extorquens PA1]
 gi|163664386|gb|ABY31753.1| inner-membrane translocator [Methylobacterium extorquens PA1]
          Length = 291

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 39/308 (12%), Positives = 83/308 (26%), Gaps = 26/308 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y  S      IY + A G  I+  +   ++        IGA   V+            +
Sbjct: 6   QYTLSGLAIGGIYALVALGFHIMWSAAKAVNFAHGDTLMIGAVLAVMGIDAGLPLPLACL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                 +    ++       F G   +I  ++ +     +      +  G          
Sbjct: 66  LAILAGALFGVVLERFAVQPFIGSNASIGWMLTTIAVGIMAESLATMQFGG--------- 116

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + S                    +        A +    R T +  A + +  N
Sbjct: 117 --FSRPLPSPGVAGAISILGAGVYPQELVIPAVALLAMAGLYAMQRHTLVGRAMQAVAHN 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++A   +   +    + +F +++ F   AG   A                +   ++ I+G
Sbjct: 175 RQAAALMGINVDRIVMFSFGLAALFGAGAGVLVAPVIQA--SASMGVLLGLKGFAVAIIG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+TS   +  A      + +   G                      +   A+ LV++   
Sbjct: 233 GITSGPGVVLAGLAFGVMEKFVEGYVS-------------TAAREIVGFSAMILVLVAFP 279

Query: 337 HSLLRLRT 344
             L   R 
Sbjct: 280 QGLFGRRE 287


>gi|154247975|ref|YP_001418933.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154162060|gb|ABS69276.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 299

 Score = 59.1 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/293 (11%), Positives = 84/293 (28%), Gaps = 5/293 (1%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
              + I S     +IY + A+   +   +   L+     A  +GA    +    + +   
Sbjct: 3   ILSQLIVSGIAVGMIYGVIAFSYQLTFATSKTLNFGQGEALMLGALV-GLTTVNFLIGQA 61

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L  P++ ++        GL              +  +     I+         +      
Sbjct: 62  LGTPLAYLLMLPIVFAFGLAQGAVVEWLGVRPAVKANSEAGWIMATIALGIIFRNLAENI 121

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                      S +         V  +     +++G   +  ++ ++ RR+    A    
Sbjct: 122 WG--RDALRFPSPLPEASLNILGVRIQPMEIAIVVGALVIMLAVEVFNRRSIFGKAVVAT 179

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +++ A   +          ++A+SS     AG   A     ++         +   ++ 
Sbjct: 180 ANDRDAAGLMGIDTRRVITFSYALSSMTAAFAGVLIAPV--TLTGATMGAVLGLKAFAVA 237

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+GG++S   +     IL     L        +  +        +       +
Sbjct: 238 IIGGLSSGMGVIVGGLILGITETLTGYYISTGYKDVPGLVLLLLVLSLKPSGL 290


>gi|239927017|ref|ZP_04683970.1| branched-chain amino acid ABC transport protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291435364|ref|ZP_06574754.1| branched-chain amino acid ABC transport protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291338259|gb|EFE65215.1| branched-chain amino acid ABC transport protein [Streptomyces
           ghanaensis ATCC 14672]
          Length = 298

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 86/309 (27%), Gaps = 19/309 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G  ++  + G+L+         G Y   +L    G +  L + V
Sbjct: 8   VLGGLALGAVYALVALGFVVIFKASGVLNFAHGSLLLFGGYLIAVLHDDLGFAGALALAV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               + A  +   L     +  + A    I++     +L+       G            
Sbjct: 68  LTTAALAGALDRFLLQRGGQDAHSAHVQTIVTIGIDIVLLTDLARRIGGD---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              ++             V         +     +  ++    R T    + R   ++ +
Sbjct: 118 -LLSLGDPWGDAVTELGPVTVADSRLAAIAVSAVVIGAVFALFRFTPWGLSLRAAAEDLE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +   +  A    +  +    A F A+      +       +      ILGG+
Sbjct: 177 AAALMGVRLGRVRAGA-WCLAGALAALAAVFLAAFPAPGLERTTGQIALNAFPAAILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +     + ++     L  G           F               + LV+L+R   
Sbjct: 236 ASPAGALAGSLLIGLTEALVVGHQSDLHVLGEGFGDVAP-------YAVMLLVLLVRPTG 288

Query: 339 LLRLRTPSN 347
           L   +  + 
Sbjct: 289 LFGAKGATR 297


>gi|172060268|ref|YP_001807920.1| monosaccharide-transporting ATPase [Burkholderia ambifaria MC40-6]
 gi|171992785|gb|ACB63704.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MC40-6]
          Length = 348

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 92/315 (29%), Gaps = 23/315 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           + +  L ++ V       L      S + +  + + + I  +   G+++V+  +  + L+
Sbjct: 30  RREATLFVVLVALVTCTALARPQFLSMQNLRDVLLNVSIVGLLTAGMTVVM-LMRHIDLS 88

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 I AY    L   Y      +   + +  G     +    +        +ATL  
Sbjct: 89  IGSVVGISAYGVGALYVAYPAMPVPVALAAGLAIGLGAGAINASLVAIGRVPSLVATLST 148

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
             IF+     W  +  G+         +    T   L        + V+      Y+   
Sbjct: 149 LYIFRGADYAW--VHGGQINATSLPDAFSRLATGSVLGIPVLALVAAVVLAGLSIYL--- 203

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
                       ++         I  N +A       +    +S F +S A  G AGA +
Sbjct: 204 ------------KQFRAGREHYAIGSNPEAARLAGIRVDRRVMSGFMISGAIAGFAGALW 251

Query: 250 AASRDRISPDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            A    +          +     +V S+ I GG+ ++        +L  +      ++  
Sbjct: 252 LARFGTVDASTGKGIELQVVAAAVVGSVAINGGVGTILGATLGAVVLGVISIALAVLHVS 311

Query: 305 YFNSLLKFDCSFNMR 319
            F             
Sbjct: 312 PFWEQAIQGALIVAA 326


>gi|89070733|ref|ZP_01157995.1| hypothetical protein OG2516_14216 [Oceanicola granulosus HTCC2516]
 gi|89043691|gb|EAR49896.1| hypothetical protein OG2516_14216 [Oceanicola granulosus HTCC2516]
          Length = 287

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 92/304 (30%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       +I  M + GLS+ +G + +++L       +G      LG+R GL       +
Sbjct: 8   LVDGVAYGMILFMISVGLSVTMGLMRVINLAHGGFAMLGGAGVHYLGARLGLPFVPAALL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +     A  + M     +       +  ++ +     ++I    +  G   + +     +
Sbjct: 68  AIGAVVALAVPMERVLYRPIYRMGELQQVLATIGITFLMIASVNLWLGSTLLAIPLPDAW 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            GT              F    +    V+      +  +   + RT      R   DN+ 
Sbjct: 128 SGT----------VDLGFRSLPMHRLIVIGAGLATALGLWALIDRTGYGIRLRAAVDNRA 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L           FA+ +      G   A      +    ++  + +++  V  GGM
Sbjct: 178 TASALGIDTGRIFAITFALGAGLAAFGGILGAELLPVDAYYPLRYMVHFLIVVAV--GGM 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++    A   L  +      M                   T    +   LV+ +R   
Sbjct: 236 GSITGSFLAALGLGILDTTARYM--------------VPDFGTIFFFLVTILVLALRPQG 281

Query: 339 LLRL 342
           LL  
Sbjct: 282 LLGR 285


>gi|328543775|ref|YP_004303884.1| amino acid or sugar ABC transporter, permease [polymorphum gilvum
           SL003B-26A1]
 gi|326413519|gb|ADZ70582.1| Putative amino acid or sugar ABC transport system, permease protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 290

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 88/305 (28%), Gaps = 27/305 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ S      +Y + A G +I+  +  +++ +      +G  + V L +         I
Sbjct: 6   QFVFSGVTVGAVYALVALGFTIIYNASDVVNFSQGEFVMLGGMTTVFLHAAGLPLAAAAI 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               + +     +  L     R   +    +I       +    + +             
Sbjct: 66  LAVVIAAAVGIALNKLAIEPARNASVVTLIIITIGASIFLRGVAQIV------------F 113

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   S      F  +         +V+ G   +   +  +  RT    A     +N
Sbjct: 114 DKQLHRFPSFSGDAPFVVAGATILPQSLWVVFGAAVVFLGLYGFFTRTLTGKAVLATANN 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +     F    +FA+S+A   +AG         ++      +  +   +  +LG
Sbjct: 174 RLAAKLVGVNTNFVMTLSFALSAAIGAVAGVLVTP--ITLTSYDIGITLALKGFAAAMLG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM +          +  +  +  G     +     F             I +  V+ +  
Sbjct: 232 GMGNPFGALVGGLAVGLIEAMTAGYISSSYKDAAAF-------------IVILAVLFVMP 278

Query: 337 HSLLR 341
           + +  
Sbjct: 279 NGMFG 283


>gi|300310383|ref|YP_003774475.1| sugar ABC transporter permease [Herbaspirillum seropedicae SmR1]
 gi|300073168|gb|ADJ62567.1| ABC-type sugar transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 347

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/319 (12%), Positives = 97/319 (30%), Gaps = 18/319 (5%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +   +     ++  L              + S+     +  + A   + V+ + G + L
Sbjct: 33  ARQKLLAFASLLLMILFFSFASPNFMEVDNLVSILQSTAVNGVLAIACTYVIITSG-IDL 91

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +        A    ++ + +G+ + L I  +       G I G+   K +          
Sbjct: 92  SVGTMMTFCAVMAGVVLTNWGMPLPLGIAAAIFFGALSGWISGMVIAKLKVPPFIAT--- 148

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                    +    +  G + +    R  +   T              +I  + +   +L
Sbjct: 149 ---------LGMMMLLKGLSLVISGTRPIYFNDTEGFSAIAQDSLIGDLIPSLPIPNAVL 199

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  ++    + L +T        +  N++A       + F K++ +  S A  G+AG  
Sbjct: 200 ILFLVAIGASIILNKTVFGRYTFALGSNEEALRLSGVKVDFWKVAVYTFSGAICGIAGLI 259

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTS-----LSKIAKATAILIGVVELCCGMNF 303
            A+  +   P + +  E   + ++VI G   S     +        I+  +V     M+ 
Sbjct: 260 IASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGTGTILGTIIGAFIMSVLVNGLRIMSV 319

Query: 304 YYFNSLLKFDCSFNMRHTT 322
                 +       +    
Sbjct: 320 AQEWQTVVTGVIIILAVYL 338


>gi|239832607|ref|ZP_04680936.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301]
 gi|239835045|ref|ZP_04683373.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301]
 gi|239823108|gb|EEQ94677.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301]
 gi|239824874|gb|EEQ96442.1| inner-membrane translocator [Ochrobactrum intermedium LMG 3301]
          Length = 295

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 109/315 (34%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    I    Y M + GL+I+ G L +++      Y +GA+   +L S
Sbjct: 4   IFGIPLQALLGQLLVGLINGSFYAMLSLGLAIIFGLLRIINFAHGAQYMLGAFVGYLLLS 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+  W  + ++ +I G  G I+   +L    +   +  L+ +     ++        G
Sbjct: 64  WLGIGYWPALILAPLIVGLGGAIVERVALSRLYNLDPLYGLLFTFGLALVIEGTFRYYYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            AG   A      G               F+    +  +V++    +     L + +T +
Sbjct: 124 AAGQPYAVPPSLAG----------GHNLGFMFLPNYRAWVVVASLIVCLGTWLLIEKTKL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N     +    +       +A+ +A  G+AG   A         +   +  
Sbjct: 174 GAYLRAATENPTLVKAFGINVPLLLTFTYALGAALAGLAGIMAAPIYQV--SPLMGSNII 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+        +L     L                  +    + ++ +
Sbjct: 232 IVVFAVVVVGGMGSILGAIITGYVLGLAEGLTKVF--------------YPEASSIVIFV 277

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L+R   L  
Sbjct: 278 IMAIVLLVRPAGLFG 292


>gi|183597119|ref|ZP_02958612.1| hypothetical protein PROSTU_00359 [Providencia stuartii ATCC 25827]
 gi|188023430|gb|EDU61470.1| hypothetical protein PROSTU_00359 [Providencia stuartii ATCC 25827]
          Length = 320

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/312 (9%), Positives = 81/312 (25%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSSLSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      +   +    A+ +        + +                + F  
Sbjct: 82  LTGAVAASMVGADVNAFVAVAGALALGAAIGACTGVIVAK------------GKVQAFIA 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +    L  +F     F I       +++       
Sbjct: 130 TLVMMLLLRGVTRVYTDGSPINTGFSDNADLFGWFGIGRPFGIPTPVWLMIIVFAAAWYL 189

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T +      +  N+ A       +   K+  +A+      +A     A    
Sbjct: 190 L-----HHTRLGRYIYALGGNEAATRLSGINVDRIKIIVYALCGLLAALASVIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +       ++
Sbjct: 245 AQPMAGNGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGISSNYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|284114245|ref|ZP_06386659.1| urea ABC transporter, permease protein UrtC [Candidatus
           Poribacteria sp. WGA-A3]
 gi|283829621|gb|EFC33959.1| urea ABC transporter, permease protein UrtC [Candidatus
           Poribacteria sp. WGA-A3]
          Length = 188

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 60/179 (33%), Gaps = 14/179 (7%)

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +        F  +    ++ MY V +    L+  +  W+ R+        IRD ++  F 
Sbjct: 1   MTDFKHIQGFSLNDPATQLVMYMVTILFLGLAYLLCRWITRSRAGRVLIAIRDCEQRVFF 60

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
              +    KL  F +S+   G+AGA +      I+P+      +I ++  V +GG  +LS
Sbjct: 61  SGYSPASYKLFVFVISAGLAGLAGALYVPQVGIITPNQIGVLPSIEMVIWVAVGGRGTLS 120

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                 A +  +                     F       +      V++     ++ 
Sbjct: 121 GAIIGAAGVNYMRSTLTN--------------HFPELWPFFLGGLFIAVVMFFPKGIMG 165


>gi|271502648|ref|YP_003335674.1| inner-membrane translocator [Dickeya dadantii Ech586]
 gi|270346203|gb|ACZ78968.1| inner-membrane translocator [Dickeya dadantii Ech586]
          Length = 322

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/312 (8%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLILIAVVSSMSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +        + +                     
Sbjct: 82  LTGAVAASIVGLEINALVAVFAALALGAVIGAGTGIIIAKGRVQ--------AFIATLVM 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L+          G  V                        +   + +   +  M  +  
Sbjct: 134 MLLLRGVTMVYTNGSPVNTGFS---------DAADALGWFGIGRPLGVPTPIWIMAVVFL 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T I      +  N+ A      ++   K+  +++      +AG    A    
Sbjct: 185 ATWYMLHHTRIGRYIYALGGNEAATRLSGISVDRVKIVVYSLCGLLSALAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLSGGKGRVVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|190895257|ref|YP_001985550.1| putative branched-chain amino acid ABC transporter permease
           [Rhizobium etli CIAT 652]
 gi|190700918|gb|ACE95000.1| putative branched-chain amino acid ABC transporter, permease
           protein [Rhizobium etli CIAT 652]
          Length = 345

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 53/309 (17%), Positives = 109/309 (35%), Gaps = 34/309 (11%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
              + IYV+ A   + + G  GL+S+   + + +GAY   I  +  GL  +L +  +A++
Sbjct: 50  MTALFIYVVLAAMWNALAGFGGLVSVGQQVFFGLGAYFT-IRLANAGLDPFLSVFAAAVV 108

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +GA  + + L  L+ +G   AI   ++     ++L+    +  G+ G  +     +    
Sbjct: 109 TGALSIPLSLFMLRLKGGEFAIGMWVV-AELAHLLVNLDRLIQGETGTSLISLNLYDSGM 167

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
            R                  +Y++ L         +  L R     A + IRDN++A  S
Sbjct: 168 RR----------------AAIYWLALASMAALLGALFMLMRGRAGAAMQAIRDNEEAATS 211

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFF-AASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           +   +   K   F +++  I +AG  + A +        F       +I +V++GG+   
Sbjct: 212 VGVRVTATKRLLFVLAAFGIAVAGGLWLATATTFQPKTYFSVQWTAYMIFMVLVGGIGKF 271

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +   +     G                 + +   +     +  L     L  
Sbjct: 272 EGAILGAILFFVIETFFGG---------------TGVWYLIGLGATALIFSLYLPRGLWG 316

Query: 342 LRTPSNFLE 350
                  L+
Sbjct: 317 EIERRFDLQ 325


>gi|167587257|ref|ZP_02379645.1| ABC sugar transporter, inner membrane subunit [Burkholderia
           ubonensis Bu]
          Length = 351

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 88/313 (28%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L         L         +     ++  QI   V+ + G++ V+   G + L+     
Sbjct: 50  LAGALAAMIALFSALSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAG-IDLSVGSVL 108

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +   ++         +    + A G + G  ++ +R       +L + E  +
Sbjct: 109 ALAASMVSVAALKWQWGPLPAALIGIAAATATGTLTGAVTVGWRIPSFI-VSLGVLEAAR 167

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  +         G                      F        + +    L    + 
Sbjct: 168 GLAYQLTNSRTAYIGDA--------------------FDYLSNPLALGISPAFLIAVAVM 207

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT        I  N++A           K+  FA+  A  G+A  F  +  +
Sbjct: 208 IVAQFVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKILVFALMGALAGLASLFQISRLE 267

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +      +        
Sbjct: 268 AADPNAGSGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGANEPTKR 327

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 328 IITGAVIVVAVVL 340


>gi|82778719|ref|YP_405068.1| high-affinity branched-chain amino acid transport system, membrane
           component [Shigella dysenteriae Sd197]
 gi|309785776|ref|ZP_07680407.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Shigella dysenteriae 1617]
 gi|81242867|gb|ABB63577.1| high-affinity branched-chain amino acid transport system, membrane
           component [Shigella dysenteriae Sd197]
 gi|308926896|gb|EFP72372.1| high-affinity branched-chain amino acid transport system
           permeaseprotein braD [Shigella dysenteriae 1617]
          Length = 282

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 87/264 (32%), Gaps = 16/264 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW----- 93
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +        
Sbjct: 12  MFNGVTLGSTYTLIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWL 71

Query: 94  ---LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   + +I+ A G  +   + +   +   +  LI +      L  +  +T G    
Sbjct: 72  LVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGS--- 128

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R   L +            +           + +       ++ +++R + +  A 
Sbjct: 129 ----RDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRAC 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R   ++ K    L           F + +A   +AG         I+P    F   +   
Sbjct: 185 RACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAF 243

Query: 271 SIVILGGMTSLSKIAKATAILIGV 294
           +  +LGG+ S+        IL+ +
Sbjct: 244 TAAVLGGIGSIPGAMIVGLILVLL 267


>gi|163855474|ref|YP_001629772.1| putative branched-chain amino acid transport permease [Bordetella
           petrii DSM 12804]
 gi|163259202|emb|CAP41502.1| putative branched-chain amino acid transport permease [Bordetella
           petrii]
          Length = 287

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 92/303 (30%), Gaps = 21/303 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +       Y++F+ GL+++ G + +++      + +      +    + +S  L +  
Sbjct: 4   IMNSMQIAAAYILFSLGLTLIFGVMRIVNFAHGEFFTLPLLVMGV-TVPFLISEQLPLFA 62

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S  +SG  G+ + L        +              + +    +  G            
Sbjct: 63  SYALSGVLGIALTLLLGGVIYKFALQRFQRDMTGSFVVSVGLSLLLQGIFLESFGGVPNK 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   V   +       +     I    +L+               + +  A R + ++ +
Sbjct: 123 LPALVEGTVNIMGAYITIQRLIITCCALLVAALMCWTIA-----SSRLGKALRAVSEDHE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A            L+ F ++++   +A    +     +S  +      I     +++GG+
Sbjct: 178 AAMLQGIPYRRIALAGFFIATSLAAIAAVLLSPV--TVSSPIIGSDYLIRGFIAIVIGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+      + ++  +  L        + +               M      V+L+R   
Sbjct: 236 GSIPGAILGSLLIAVIESLGGYYFDPTWAT-------------ITMFALTMFVLLVRPKG 282

Query: 339 LLR 341
           +L 
Sbjct: 283 ILG 285


>gi|86360561|ref|YP_472449.1| sugar ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86284663|gb|ABC93722.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           CFN 42]
          Length = 333

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/317 (12%), Positives = 92/317 (29%), Gaps = 23/317 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K + +L  + VV   +         +   +  +     I ++ A    + V     + 
Sbjct: 5   MKKRETLLFAIIVVMIAVFSTRAADFATPDNLAGIFNDTAILIILALAQ-MTVILTKSID 63

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A    +  ++ + +     +++ ++A+  GA    +    +        + TL
Sbjct: 64  LSVAANLAFTGMAIAMMNAAFPGLPLMVLILAAVAIGAALGTINGFLVWRLEIPPIVVTL 123

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I++ +                       G  V +      F S      + +  + 
Sbjct: 124 GTLTIYRGMAFVLSG-----------------GAWVNAHQMTPNFLSVPRTPILGLPVLS 166

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                + A +   LR +    +      N  A           K  AF +S A  G++  
Sbjct: 167 WVAIIIVALMYTLLRYSQFGRSAYATGGNPTAAVYAGIDTGRTKFLAFVLSGALAGLSSY 226

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
            + +       D+    E   V + V     I GG+ S++        L  +      + 
Sbjct: 227 LWVSRYAVAYVDIANGFELDSVAACVIGGISIAGGVGSVAGTVLGALFLGVIKNALPVIG 286

Query: 303 FYYFNSLLKFDCSFNMR 319
              F  +        + 
Sbjct: 287 ISPFTQMAISGTVIILA 303


>gi|295680765|ref|YP_003609339.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295440660|gb|ADG19828.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 291

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 82/299 (27%), Gaps = 26/299 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               +IY + A+G  +   + G L+     A  +GA   + L S       ++  V A  
Sbjct: 12  IALGMIYAVIAFGYQLTFATSGTLNFGQGDALMLGALVGLTLVSLGVNYWLMIPLVCAFG 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 +  +              ++ +     I         G                
Sbjct: 72  LLQGAFVERIGVRPAIKIKSEFGWIMSTIALGIIFKNVAENVWG-----------RDDLR 120

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             S +                  V+ G   +  ++  + R+T    A     +++ A   
Sbjct: 121 FPSPLPEAPLKVFGANVLPMELLVVGGALAMMLAVEFFNRKTIFGKAVVATANDRDAAAL 180

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +          ++A+SS     AG   A     ++         +   ++ I+GG+TS  
Sbjct: 181 MGINTGLVITFSYALSSLTAAFAGVLIAPL--TLTGATMGAVLGLKAFAVAIIGGLTSGL 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            I     IL              +  +                + L +V+ M+   L  
Sbjct: 239 GILVGGVILGIAETTTGFYLSTGYKDVPGL-------------VLLLIVLAMKPAGLFG 284


>gi|212640487|ref|YP_002317007.1| ribose ABC transporter permease [Anoxybacillus flavithermus WK1]
 gi|212561967|gb|ACJ35022.1| ABC-type ribose transport system, permease component [Anoxybacillus
           flavithermus WK1]
          Length = 320

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/321 (10%), Positives = 97/321 (30%), Gaps = 25/321 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +LN       +  ++  ++L     +  +     ++  Q+ I  + A+G++ V+   G +
Sbjct: 14  KLNIKKLGPLVGLLLLCIVLTFLSDSFFTLDNWLNILRQVSINALIAFGMTFVI-LTGGI 72

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+ +     L +     I+ ++   +       +   + +      ++A   
Sbjct: 73  DLSVGSVLALSSAFAAGLMANGVNGIFAMMIGISAGLAMGALNGVIITKGRVAPFIATLA 132

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
            +       ++                         +        F      Y + +   
Sbjct: 133 TMTIFRGATLVYTEGR-------------------PITGFSDELAFQIIGRGYFLRIPVP 173

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           ++ M    A + + L++T        I  N++A       +   K+  ++++     +AG
Sbjct: 174 VVLMLVAYALLYVVLKKTTFGRHTYAIGGNEEATRLSGIRVDRLKIWIYSLTGGLAALAG 233

Query: 247 AFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
               +  +   P      E   + ++V     + GG   +        I+  +      +
Sbjct: 234 LILTSRLNSAQPTAGTAYELDAIAAVVLGGTSLSGGRGWIFGTLIGALIIGVLNNGLNLL 293

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
           N   F   +       +    
Sbjct: 294 NVSSFYQQVIKGVVILLAVIL 314


>gi|51596529|ref|YP_070720.1| ABC sugar/ribose transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|170024199|ref|YP_001720704.1| monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|51589811|emb|CAH21443.1| ABC sugar/ribose transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|169750733|gb|ACA68251.1| Monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
          Length = 353

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 90/313 (28%), Gaps = 10/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +V   +  L      S     +M   + I+ + A G+ ++V   G + L+     
Sbjct: 36  AFFALLVIIAVFSLLSPNYFSGANFLTMASHVAIFGLPAIGM-LLVILNGGIDLSVGSTL 94

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       L     +    ++    + +     +     +      L    + +  +  
Sbjct: 95  GLSGVFAGFLMQGISIESLGVVLYLPVWAVVIMTLALGALVGLINGIL----IAIFRVPA 150

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +           A + + + L +        +    F          +   +L +  ++
Sbjct: 151 FVATLGSLYVARGAALLMTNGLTYNKLAGSPELGNTGFDWLGFNRLFNIPIGVLALGVVA 210

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    L RTA          N++A       + F K+S + +S     +AG   ++   
Sbjct: 211 LACGFLLMRTAFGRWLYASGGNERAADLSGVPVKFVKISVYVLSGVCAALAGLVLSSQLT 270

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG  ++        ++  + +    +    +   
Sbjct: 271 SAGPTAGTTYELTAIAAVVIGGAALTGGRGNVRGTLLGAFVIGFLSDGLVIIGVSAYWQT 330

Query: 310 LKFDCSFNMRHTT 322
           +       M    
Sbjct: 331 VFTGAVIVMAVLL 343


>gi|238797811|ref|ZP_04641304.1| Inner-membrane translocator [Yersinia mollaretii ATCC 43969]
 gi|238718339|gb|EEQ10162.1| Inner-membrane translocator [Yersinia mollaretii ATCC 43969]
          Length = 346

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/332 (11%), Positives = 92/332 (27%), Gaps = 25/332 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLG-----ATKSQKYIDSMGIQILIYVMFAWG 55
           MS    +L K   I  ++  +  +  FL           +   +  + +Q+ I  + A G
Sbjct: 21  MSGLKGKLPKDTGIFIVMVGIALIFEFLGWFIRDQSFLLNPNRLLLIILQVAIIGIIAVG 80

Query: 56  LSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           ++ V+ + G + L+     A+ A               L     ++      ++    ++
Sbjct: 81  VTQVIITTG-IDLSSGSLIALTAVVAAS----------LAQTSDSISPMYPHLLDLPAAI 129

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                            F        P       +  A  L    T    +       ++
Sbjct: 130 PITAGIGVGIVCGFINGFLITRTGIPPFIATLGMMVSARGLAQYYTKGNPVSFLSDDFTA 189

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                + +   L+       ++    + T        I  N  +       +    ++ +
Sbjct: 190 IGQGAMPVIIFLVIAVIFHIAL----KHTRYGKYVYAIGGNMISAKVSGINVNKYLVTVY 245

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAI 290
            ++    G+AG   AA        M +  E   + + VI     +GG+  ++       I
Sbjct: 246 TIAGGLAGLAGVVLAARVSSGQSSMGQSYELDAIAAAVIGGSSLMGGVGRITGTVIGAVI 305

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           L  +      +    +   +            
Sbjct: 306 LGLIKSGFTFIGVDSYIQDIIKGIIIVSAVAI 337


>gi|328951648|ref|YP_004368983.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451972|gb|AEB12873.1| ABC-type transporter, integral membrane subunit [Marinithermus
           hydrothermalis DSM 14884]
          Length = 285

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 92/285 (32%), Gaps = 13/285 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A GL+I VG +G+++         GA++   L    G    L + V
Sbjct: 8   LLNGVLAAGVYALVASGLAIAVGVVGIVNFAHGEFLMAGAFASYWLYVARGADPLLSLGV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+     G++     ++       +  ++++     +L     +  G     V      
Sbjct: 68  AALALYLGGVLTYHALIRPVMTAPELNQMLLTFGLSVLLQNLALLLFGGDARVVHPP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                    +            +           + A++ L+L R+    A R +  N+ 
Sbjct: 125 --------YQGSAVTLGPFSVGLVPLGAFGLSAGILAALYLFLHRSRTGLAVRAVAQNRV 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L          AF +S+A  G+AG   +            F   +   +IV++ G+
Sbjct: 177 APGLLGIETERVYALAFGLSAALAGVAGVMLSVMLYA--SPTVGFLYTLKSFAIVVMAGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            +++ +  A  +L                 +             +
Sbjct: 235 GNITGVLWAALVLALAEAFVSTYVPGGGGWVEAVFFFVIFAALVV 279


>gi|226304845|ref|YP_002764803.1| branched-chain amino acid ABC transporter permease protein
           [Rhodococcus erythropolis PR4]
 gi|226183960|dbj|BAH32064.1| putative branched-chain amino acid ABC transporter permease protein
           [Rhodococcus erythropolis PR4]
          Length = 285

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/299 (12%), Positives = 86/299 (28%), Gaps = 28/299 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                +YV+ A G +IV  S    +        +G +          L + ++  ++ + 
Sbjct: 8   LALGAVYVLVAIGYNIVFVSSNTFNFAQAQLMMVGTFVAYTGLVTLKLPVLVVAVMATVT 67

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 +  + +   R        L+ +     +L     +  G   + V         T
Sbjct: 68  VMLLASVEEIVA--IRPVADHQNQLVTTLGVATLLNGATQLIWGSEPLTVPFFGSNEPIT 125

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +     +                +L+    L   +    ++T    A   I ++++A   
Sbjct: 126 LLGGRTYP-----------VEIALLVAAIALVIGLSYVSKKTMTGLALIGISEDREAAML 174

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
               +    L AFA S A  G+ G         +       +  +     + +GG  SL 
Sbjct: 175 RGVNVRRLALGAFAFSGALAGVLGLLVGPKTFAV--ATLGAALALKGFVALAIGGFGSLP 232

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  V           ++++  F               L ++++++   L  
Sbjct: 233 GALIGGLTVGLVESFTALWAGSQYSNIAVFT-------------VLIVILMVKPAGLFG 278


>gi|119899734|ref|YP_934947.1| ABC transporter permease [Azoarcus sp. BH72]
 gi|119672147|emb|CAL96061.1| ABC transporter permease protein [Azoarcus sp. BH72]
          Length = 308

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 97/308 (31%), Gaps = 15/308 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY-VILGSRYGLSIWLLIP 97
           +    +  ++Y + A G  ++  + G+ +          A ++        G +      
Sbjct: 8   LIGGLLSGVLYALVALGFVLIYKASGVFNFAQGAMVFFAALTFVGFQQVLPGWTGLEAGG 67

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL--IKWKPITNGKAGIYVADR 155
            +         +  +  L    + + +  L+        +  I    +  G A       
Sbjct: 68  RAVFWLAFVLALASMVVLGILTEKVVLRPLVNQPHITLFMATIGLTFLVEGIAQAIWGAN 127

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
           ++ L   +      +   S+ +I   F  +       L AS+ L+ + T +  A R + D
Sbjct: 128 VHGLDLGIADEPIEWVMDSADIIVSKFDVFAATLAGVLVASLALFFQYTKVGRALRAVAD 187

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           + +A  S+   +       +AV+     +AG  + A         F     +  + ++IL
Sbjct: 188 DHQAALSIGIPLQHIWAIVWAVAGFVALVAGLIWGARSGVQFALTFT---ALKALPVLIL 244

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG TS+        I+    +L            ++              +     +L+R
Sbjct: 245 GGFTSVPGAIVGGLIIGASEKLAEVYVGPMVGGGIEGWFP---------YVLALGFLLVR 295

Query: 336 SHSLLRLR 343
              L   R
Sbjct: 296 PEGLFGER 303


>gi|85703572|ref|ZP_01034676.1| ABC branched-chain amino acid transporter, inner membrane subunit
           [Roseovarius sp. 217]
 gi|85672500|gb|EAQ27357.1| ABC branched-chain amino acid transporter, inner membrane subunit
           [Roseovarius sp. 217]
          Length = 289

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 102/303 (33%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+++ G L +++      Y +GA++  +L    GL  W  + +
Sbjct: 10  LLVGLINGSFYALLSLGLAVIFGLLRVINFAHGAQYMLGAFAAYLLSLWLGLGYWSALIL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  G ++    L        +  L+ +      +        G AG         
Sbjct: 70  APVLVGLAGAVVERTMLSRLYKLDHLYGLLFTFGLALTIEGTFRYIYGAAGQPYPTP--- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                            F+   I+  +V++    +  ++ L + +T + +  R   +N  
Sbjct: 127 -------EALAGGVNLGFMFLPIYRGWVVVASMIVCLAVWLLIEKTKLGSYLRAATENPI 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              S    +    L  F         A A   A+       +   +  IIV ++V++GGM
Sbjct: 180 LVQSFGVNV--PLLLTFTYGLGAALAAFAGVLAAPIYQVSPLMGSNIIIIVFAVVVIGGM 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L     L                  +      ++ + + +V+++R   
Sbjct: 238 GSILGAIVTGYLLGIAEGLTKVF--------------YPEASNIVVFVIMAIVLILRPAG 283

Query: 339 LLR 341
           L  
Sbjct: 284 LFG 286


>gi|163747759|ref|ZP_02155100.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Oceanibulbus indolifex HEL-45]
 gi|161378945|gb|EDQ03373.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Oceanibulbus indolifex HEL-45]
          Length = 167

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 1/135 (0%)

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R  R+++ A  +    +   +L +  VS+ F G+AGA F  S   ++P+ F      I 
Sbjct: 26  LRASREDEVAADASGINMYGHRLISLVVSAFFAGVAGALFGHSLGVLNPNSFYLGITFIT 85

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           ++++++GG+ SL+       +L  ++E    M                 +   + +I + 
Sbjct: 86  LAMLVVGGIGSLTGAVMGVLVLSIIIEGLVRMERGMEIGETTLALPTGAQEIIIGIIMIL 145

Query: 330 LVILMRSHSLLRLRT 344
           ++IL R   L   R 
Sbjct: 146 VLIL-RPAGLTGGRE 159


>gi|153008730|ref|YP_001369945.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
 gi|151560618|gb|ABS14116.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
          Length = 295

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/315 (16%), Positives = 110/315 (34%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    I    Y M + GL+I+ G L +++      Y +GA+   +L S
Sbjct: 4   IFGIPLQALLGQLLVGLINGSFYAMLSLGLAIIFGLLRIINFAHGAQYMLGAFVGYLLLS 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+  W  + ++ +I G  G I+   +L    +   +  L+ +     ++        G
Sbjct: 64  WLGIGYWPALILAPLIVGLGGAIIERVALSRLYNLDPLYGLLFTFGLALVIEGTFRYYYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            AG   A      G               F+    +  +V++   F+     L + +T +
Sbjct: 124 AAGQPYAVPPSLAG----------GHNLGFMFLPNYRAWVVVASLFVCLGTWLLIEKTKL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N     +    +       +A+ +A  G+AG   A         +   +  
Sbjct: 174 GAYLRAATENPTLVKAFGINVPLLLTFTYALGAALAGVAGIMAAPIYQV--SPLMGSNII 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+        +L     L                  +    + ++ +
Sbjct: 232 IVVFAVVVVGGMGSILGAIITGYVLGLAEGLTKVF--------------YPEASSIVIFV 277

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L+R   L  
Sbjct: 278 IMAIVLLVRPAGLFG 292


>gi|119715416|ref|YP_922381.1| inner-membrane translocator [Nocardioides sp. JS614]
 gi|119536077|gb|ABL80694.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Nocardioides sp. JS614]
          Length = 313

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 54/325 (16%), Positives = 115/325 (35%), Gaps = 22/325 (6%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL-- 90
                ++ S    +++ +  A  L + +G   + +   V  + IG Y++ +L  R     
Sbjct: 1   MVLDTFLISGLFHVVMLIGLALLLHLQLGLSRIANFGVVGFWGIGLYAFGVLYVRVDWPF 60

Query: 91  ----SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
                  +   ++ M +G CG+++G        D + + TL  + +   +    + +T G
Sbjct: 61  EDPIQFLVCAALATMAAGLCGLLVGWLIADLDVDGVMVGTLGFATVVALLATTEQDLTGG 120

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             G+                +RF        + E+    VL+ +     + +  + R   
Sbjct: 121 ALGM--------------GGLRFPYDTGDVAVNELIWLLVLVALVTGILAYVWLVHRNPY 166

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                 I  N+    SL       KL  F V+SA +G+ GA +      +          
Sbjct: 167 GRLLIAIGSNEPLAKSLGKPATRTKLGLFTVTSALMGLLGAMYGVMVRFLEVSSLGIELT 226

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           +  +  +++GG   +        + +GV ++   +  Y       +  +  +    L  +
Sbjct: 227 LAAVVGLVVGGSVRVLGAVVGVILTVGVFDIV--IQSYIPLPAEWYTQTIPLLREVLFGL 284

Query: 327 ALFLVILMRSHSLLRLRTPSNFLER 351
           AL LV++ R   LL        + R
Sbjct: 285 ALILVLIFRPLGLLGHMRRDRLMRR 309


>gi|312890617|ref|ZP_07750152.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Mucilaginibacter paludis DSM 18603]
 gi|311296916|gb|EFQ74050.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Mucilaginibacter paludis DSM 18603]
          Length = 322

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 90/312 (28%), Gaps = 16/312 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  VV  ++L        +     ++  QI + +  A G+++VV + G + L+     A
Sbjct: 14  LIALVVLCIVLSCLSDKFLTVDNGWNVMRQISVNICIAVGMTLVVLTSG-IDLSVGSVLA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L           + +   + GA    +   +     +  AI    +      
Sbjct: 73  LCGAITAGLMKNGIEVHSSNLYIGFTLLGAILAGLFTGAGVGAFNGFAITRFKVPPFVAT 132

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +                              +   +F      + + +   +     +  
Sbjct: 133 L----------AMLTIARGLTLLWTQGFPISVFGEKFGYIGTGWFLGIPVPVWISAIVVL 182

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           + ++   +T +      I  N+ A       I   K+  ++++ A   + G    +  D 
Sbjct: 183 TAVVITMKTPLGRYIYAIGGNENAAKLSGINISKVKIIVYSMAGALAAVGGLIVTSRLDS 242

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P+     E   + ++VI      GG  ++        I+  +      +N   F   +
Sbjct: 243 AQPNAGISYELDAIAAVVIGGTSLSGGKGTIWGTVLGAVIIGVLNNGLVLLNVSPFWQQV 302

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 303 VKGGVILLAVII 314


>gi|158313873|ref|YP_001506381.1| inner-membrane translocator [Frankia sp. EAN1pec]
 gi|158109278|gb|ABW11475.1| inner-membrane translocator [Frankia sp. EAN1pec]
          Length = 309

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/311 (10%), Positives = 83/311 (26%), Gaps = 25/311 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
               +   +Y + A G ++V G L L++      + +GA+  +         +      S
Sbjct: 12  IDGLMVGALYAVIALGYTLVYGVLQLINFAHSEVFMLGAFGGLFASRAL---VPAGATPS 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + S    +   +                     +              G  +       
Sbjct: 69  GLTSAGLVLFGLVAGALAGAAAAYALERCAYRPLRRRGAPRLAYLISAIGASLFAFNLAG 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIF-------MYYVLLGMCFLSASIILWLRRTAISNAWRT 212
               R  I      ++  +  +F          +      +  ++   +  T +  + R 
Sbjct: 129 KEFGRQSIPVPDLFTNGTVVTVFGAEISTQSLVIACTALAMLLAVDHLVAGTRLGQSVRA 188

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +  + +    +   +    +  F +     G  G  +A + +        F   I   + 
Sbjct: 189 VAQDAECAGLMGVDVQKVIVVTFVLGGLLAGAGGFLYAMTFNA--SYTMGFVPGIKAFTA 246

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            +LGG+ ++        +L  V      +    + +++ F     +              
Sbjct: 247 AVLGGIGNVRGAVLGGLLLGLVESFGGYLFDASYKNVIAFTVLVLVLLV----------- 295

Query: 333 LMRSHSLLRLR 343
             R   LL  R
Sbjct: 296 --RPSGLLGTR 304


>gi|313893928|ref|ZP_07827494.1| ribose transport system permease protein RbsC [Veillonella sp. oral
           taxon 158 str. F0412]
 gi|313441492|gb|EFR59918.1| ribose transport system permease protein RbsC [Veillonella sp. oral
           taxon 158 str. F0412]
          Length = 284

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 89/295 (30%), Gaps = 25/295 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
           +      + ++  Q+ I  + A+G++ V+   G + L+     A+ +          G  
Sbjct: 4   SFLEFSNLRNLLRQVSINAIIAFGMTFVI-LTGGIDLSVGSILALSSAVMA-NLIVTGTD 61

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L I ++A      G I GL     R                   +    I  G   ++
Sbjct: 62  PVLAIVLAAGAGLVLGGINGLVITYGRVAPFIAT------------LATMTIYRGATLVF 109

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                    T       F +   + +       ++         ++   L RT++     
Sbjct: 110 TDGNPISGLTQDPLFHGFGQGDIAGLPVPAITMFLAF------IALWFVLSRTSLGRKTY 163

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +  ++K  +     I   K+  +A++    G+AGA   +  +   P      E   + +
Sbjct: 164 AVGGSEKVSYIAGIKIDRVKIFVYALTGMLCGIAGAIITSRLNSAQPTAGAGYELDAIAA 223

Query: 272 IV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
           +V     + GG   +        I+  +      ++   F   +       +   
Sbjct: 224 VVLGGTSLAGGRGHIVGTLIGALIIGTLNNGLNILDVSSFYQQVVKGIVILLAVL 278


>gi|296536663|ref|ZP_06898732.1| urea ABC superfamily ATP binding cassette transporter, permease
           protein [Roseomonas cervicalis ATCC 49957]
 gi|296263015|gb|EFH09571.1| urea ABC superfamily ATP binding cassette transporter, permease
           protein [Roseomonas cervicalis ATCC 49957]
          Length = 346

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 96/334 (28%), Gaps = 17/334 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +  +  +L  LA++   L  L         +        +   + A     + G  G++S
Sbjct: 1   MTAHSGLLSFLAMLGMGLALLIGAPMLFDLFALLQVTVFVAMAVLALSQGFIWGYGGIMS 60

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                 + +G Y+Y ++      + W +    A+ +     +          D       
Sbjct: 61  FGQSAFFGLGGYTYAVMAMNIPETGWAVAGAIALPALFAAALGYFMFYGRISDAYVGVIT 120

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           +   I    +I          G      L                     +    ++YV 
Sbjct: 121 LTVTIILFSVINSTAGDAYTIGN---APLGGFNGMPAVPPLTIPGHPDMPLEPEQLWYVS 177

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +G   L   ++  +  +        IR+N+     L       KL  FA+     G AG 
Sbjct: 178 MGCLLLVYVLLRGILASRFGRVVVAIRENETRAQLLGYDTRLYKLLVFAIGGGIAGAAGC 237

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            F      ISP +F  + +  V+  V+                 +G +       F    
Sbjct: 238 LFTNWGGFISPTVFSLATSAQVLIYVL--------------VGGLGTLLGPILGAFAIQY 283

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            +        +    ++ + L + +L+    ++ 
Sbjct: 284 LITALGAQQALNANLVLGVILAVFVLLVPQGVVP 317


>gi|291455649|ref|ZP_06595039.1| ribose ABC transporter, permease protein [Bifidobacterium breve DSM
           20213]
 gi|291382577|gb|EFE90095.1| ribose ABC transporter, permease protein [Bifidobacterium breve DSM
           20213]
          Length = 334

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 92/311 (29%), Gaps = 27/311 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            + +V  + + +      +   + ++   I I  + A G+++V+ + G + L+     A+
Sbjct: 20  FVLLVLIIFMLINAPNFGTVSNLFNVARSISISAILAAGMTLVIITTG-IDLSVGSTIAV 78

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                V+        I  +I    + +                 Y  +A  I++      
Sbjct: 79  SGCVAVLAARAGLNPILAVILGMFIGAVIG------LINGVLVAYCKLAAFIVTLGTMTF 132

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           +        G                +  +     F +    Y   +    + M  +   
Sbjct: 133 MRGLAYTITGG---------------LPIVDNNLSFRAIGNGYIFNIPIPFIIMIIVYLV 177

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           I + L +T   +    +  N +A       +    LS + ++    G+AG  FAA     
Sbjct: 178 IWVVLDKTKYGSHVYAVGGNAEAARLAGINVKAVLLSVYVIAGVCAGLAGCIFAARVVSA 237

Query: 257 SPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            P      E   + + V     + GG   +S       I   +      MN  +F   L 
Sbjct: 238 QPTAGDGYEMDAIAAAVLGGTALAGGKGKISGTFIGAVIFGVLTTGLVLMNVPFFTQQLI 297

Query: 312 FDCSFNMRHTT 322
                 +    
Sbjct: 298 KGVVIIVAVLI 308


>gi|284992240|ref|YP_003410794.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160]
 gi|284065485|gb|ADB76423.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160]
          Length = 388

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/326 (10%), Positives = 97/326 (29%), Gaps = 29/326 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  LAV+  +          +   + ++     +  + + G++ V+   G + L+
Sbjct: 35  RNLGLVVALAVLCIVGTATAPDRFLAVDNVLTILRLAAVIGVVSIGMTFVI-IGGGIDLS 93

Query: 70  CVIAYAIG---AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
                A+    A +             +++  + ++   CG++ G+     +        
Sbjct: 94  VGAIVALSSVWATTLATQAMAADFHWIVMVVTALLVGAGCGLVNGIVIAYGKLVAFIATL 153

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
            +++                            +      +++   F + F    + +  +
Sbjct: 154 AMLAAA--------------------RGLAEIIANRRTQIVQDRDFLAFFSGDVLGVPTL 193

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           ++    ++ +  + L RT        +  N +A       +    +  + +S    G+A 
Sbjct: 194 VVIFALVAIAGWVLLNRTTFGRRTFAVGGNAEAARLAGIRVQRHTMWLYVLSGVTCGIAA 253

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
               A     S       E   + ++VI     +GG  ++        I   +  +    
Sbjct: 254 VMLMARTTTGSSTHGTLYELDAIAAVVIGGTLLIGGRGTIVGTVLGVLIFTTLGNVFTLN 313

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIA 327
           N       +       +     M +A
Sbjct: 314 NLSSSAQAVARGVIIVVAVLLQMRLA 339


>gi|86158602|ref|YP_465387.1| chain amino acid ABC transporter inner membrane subunit
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775113|gb|ABC81950.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 277

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 88/282 (31%), Gaps = 14/282 (4%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
             L+Y + A+G  +   +   L+        + A+   +     G+  WL++P   +   
Sbjct: 1   MGLVYALIAYGFQLTYATSKSLNFGQGELVMVSAFFS-LTLLDLGVPYWLMVPGGLVFGA 59

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
             G+ +    ++   +  +   ++++ I    L        G+        +      V 
Sbjct: 60  LLGLAVERAGVRLALEQKSEGWILLTIILGLFLFSAAENVWGRDDRPFPTPISSDPIHVL 119

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
                       V        V +G+  + A I ++ RRT +  A+  +  ++ A   + 
Sbjct: 120 G-----------VDVTPLELSVAVGVIAVMALIEVFKRRTLLGKAFEAVSADRDAGELMG 168

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
            +     + ++A+S     +AG   +             +  +   S+ ++ G+ S   +
Sbjct: 169 ISATRTVMLSYALSGTVAALAGILVSPITTVGPTMAS--ALVLKAFSVAVVAGLDSGFGV 226

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
                +L  +  L        +                   +
Sbjct: 227 VLIGLLLGALESLASFYVGSGWREAPGLVLLILALAVRPTGV 268


>gi|237653749|ref|YP_002890063.1| inner-membrane translocator [Thauera sp. MZ1T]
 gi|237624996|gb|ACR01686.1| inner-membrane translocator [Thauera sp. MZ1T]
          Length = 288

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 95/281 (33%), Gaps = 12/281 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL++V G +G+++L     Y IGAY   +L S  G  +  ++   
Sbjct: 11  LNSLQYGLLLFLVASGLTLVFGIMGIINLAHGSFYMIGAYLAFVLTSATGSLVLAVVLGI 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +       +               + L   +  + +L+ +  I   +    +       
Sbjct: 71  PLALAFGAFLEWAL----------FSHLYKRDHLEQVLLTYGLILIFEQLRSLLVGDDVH 120

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G  + + +      +  + Y ++   +      L+ ++   ++RT +    R   D++  
Sbjct: 121 GVAIPAFLDASIQLTEVMSYPVYRLAISAICIVLAVALYYLIQRTRLGMMIRAGNDDRGM 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   I       FA+  A   +AG   A                II   IV++GG+ 
Sbjct: 181 VEALGININMIYRVVFALGVALAALAGMLAAPISSVFPNMGSHVL--IISFVIVVIGGIG 238

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           S+     A  I+         +       ++    +  +  
Sbjct: 239 SVWGALVAALIVGFADTFGKVLVPELSGIVVYVVMAVVLLW 279


>gi|23499792|ref|NP_699232.1| branched-chain amino acid ABC transporter permease [Brucella suis
           1330]
 gi|62316985|ref|YP_222838.1| branched-chain amino acid ABC transporter permease [Brucella
           abortus bv. 1 str. 9-941]
 gi|83268980|ref|YP_418271.1| inner-membrane translocator [Brucella melitensis biovar Abortus
           2308]
 gi|161620116|ref|YP_001594002.1| inner-membrane translocator [Brucella canis ATCC 23365]
 gi|225628509|ref|ZP_03786543.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ceti str. Cudo]
 gi|225685893|ref|YP_002733865.1| inner-membrane translocator [Brucella melitensis ATCC 23457]
 gi|237816548|ref|ZP_04595540.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus str. 2308 A]
 gi|254691528|ref|ZP_05154782.1| hypothetical protein Babob68_15560 [Brucella abortus bv. 6 str.
           870]
 gi|254695176|ref|ZP_05157004.1| hypothetical protein Babob3T_11118 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254698275|ref|ZP_05160103.1| hypothetical protein Babob28_11340 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254699344|ref|ZP_05161172.1| hypothetical protein Bsuib55_00572 [Brucella suis bv. 5 str. 513]
 gi|254702465|ref|ZP_05164293.1| hypothetical protein Bsuib36_00600 [Brucella suis bv. 3 str. 686]
 gi|254706411|ref|ZP_05168239.1| hypothetical protein BpinM_05322 [Brucella pinnipedialis
           M163/99/10]
 gi|254711299|ref|ZP_05173110.1| hypothetical protein BpinB_13790 [Brucella pinnipedialis B2/94]
 gi|254711900|ref|ZP_05173711.1| hypothetical protein BcetM6_00570 [Brucella ceti M644/93/1]
 gi|254714970|ref|ZP_05176781.1| hypothetical protein BcetM_00580 [Brucella ceti M13/05/1]
 gi|254720719|ref|ZP_05182530.1| hypothetical protein Bru83_14665 [Brucella sp. 83/13]
 gi|254731717|ref|ZP_05190295.1| hypothetical protein Babob42_11135 [Brucella abortus bv. 4 str.
           292]
 gi|256014820|ref|YP_003104829.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella microti CCM 4915]
 gi|256030071|ref|ZP_05443685.1| hypothetical protein BpinM2_05365 [Brucella pinnipedialis
           M292/94/1]
 gi|256059722|ref|ZP_05449917.1| hypothetical protein Bneo5_05160 [Brucella neotomae 5K33]
 gi|256112072|ref|ZP_05453008.1| hypothetical protein Bmelb3E_05255 [Brucella melitensis bv. 3 str.
           Ether]
 gi|256158243|ref|ZP_05456152.1| hypothetical protein BcetM4_05295 [Brucella ceti M490/95/1]
 gi|256252816|ref|ZP_05458352.1| hypothetical protein BcetB_00575 [Brucella ceti B1/94]
 gi|256256713|ref|ZP_05462249.1| hypothetical protein Babob9C_05000 [Brucella abortus bv. 9 str.
           C68]
 gi|260166878|ref|ZP_05753689.1| hypothetical protein BruF5_00555 [Brucella sp. F5/99]
 gi|294853056|ref|ZP_06793728.1| branched-chain amino acid transport system permease [Brucella sp.
           NVSL 07-0026]
 gi|297250072|ref|ZP_06933773.1| branched-chain amino acid transport system permease [Brucella
           abortus bv. 5 str. B3196]
 gi|23463358|gb|AAN33237.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella suis 1330]
 gi|62197178|gb|AAX75477.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|82939254|emb|CAJ12190.1| Bacterial inner-membrane translocator [Brucella melitensis biovar
           Abortus 2308]
 gi|161336927|gb|ABX63231.1| inner-membrane translocator [Brucella canis ATCC 23365]
 gi|225616355|gb|EEH13403.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ceti str. Cudo]
 gi|225641998|gb|ACO01911.1| inner-membrane translocator [Brucella melitensis ATCC 23457]
 gi|237787361|gb|EEP61577.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus str. 2308 A]
 gi|255997480|gb|ACU49167.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella microti CCM 4915]
 gi|294818711|gb|EFG35711.1| branched-chain amino acid transport system permease [Brucella sp.
           NVSL 07-0026]
 gi|297173941|gb|EFH33305.1| branched-chain amino acid transport system permease [Brucella
           abortus bv. 5 str. B3196]
          Length = 329

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/317 (16%), Positives = 110/317 (34%), Gaps = 22/317 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I  L+  M + GL+++ G +G+L+      Y +GAY       +     WL I +
Sbjct: 24  VLNGAIYGLLLFMVSAGLTLIFGMMGVLNFAHASFYMMGAYFAY--TLQPLTGFWLAILI 81

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I G  G+++    L+    +     L+++     ++ +   I  G          + 
Sbjct: 82  APVIVGIVGVLVERFILRRVHAFGHAHELLVTFGLSVVIAEVIKIFYGN---------FA 132

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + + ++F  F    V Y  +  ++      +   I L L RT I    R+     +
Sbjct: 133 VEYRIPAALQFSAFDLGGVSYPFYRLFIGAVALVMFLLIYLLLTRTRIGIVVRSAIYRPR 192

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-----------FKFSENI 267
              +L   +    +  F V +   G+AG+   A                           
Sbjct: 193 MVEALGHNVPLVFMGVFGVGAFLAGLAGSVAGAFYTTNPNMALELGVMVFVVVVVGGLGS 252

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  ++     +  LS +A    + I  +    G+  Y            +    TL    
Sbjct: 253 LGGAMFASLLIGILSSVAVGVKVSIASLLDYVGLGDYAREIGGVLTLEVSSIAATLPFFL 312

Query: 328 LFLVILMRSHSLLRLRT 344
           + +V+L+R   L   + 
Sbjct: 313 MLIVLLVRPSGLFGAKE 329


>gi|190895548|ref|YP_001985840.1| sugar ABC transporter, permease protein [Rhizobium etli CIAT 652]
 gi|190699493|gb|ACE93577.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           CIAT 652]
          Length = 333

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 94/317 (29%), Gaps = 23/317 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K + +L  + V+   +         +   +  +     I ++ A    + V     + 
Sbjct: 5   IRKRETLLFAIIVLMIAVFSTRAADFATPDNLAGIFNDTAILIILALAQ-MTVILTKSID 63

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A    +  ++ + +     +++ ++A++ GA    +    +        + TL
Sbjct: 64  LSVAANLAFTGMAIAMMNAAFPGLPLVVLILAAIVIGAALGTINGFLVWRLEIPPIVVTL 123

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I++ +                       G  V +      F S      + +  + 
Sbjct: 124 GTLTIYRGMAFVLSG-----------------GDWVNAHQMTPNFLSVPRAPILGLPVLS 166

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                + A + + LR +    +      N  A           K  AF +S A  G++  
Sbjct: 167 WVAIIIVALMYMLLRYSPFGRSAYATGGNPTAAVYAGIDTGRTKFFAFVLSGALAGLSSY 226

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
            + +       D+    E   V + V     I GG+ S++        L  +      + 
Sbjct: 227 LWVSRYAVAYVDIANGFELDSVAACVIGGISIAGGVGSVAGTVLGALFLGVIKNALPVIG 286

Query: 303 FYYFNSLLKFDCSFNMR 319
              F  +        + 
Sbjct: 287 ISPFTQMAISGTVIILA 303


>gi|149913985|ref|ZP_01902517.1| ABC transporter, membrane spanning protein [Roseobacter sp.
           AzwK-3b]
 gi|149812269|gb|EDM72100.1| ABC transporter, membrane spanning protein [Roseobacter sp.
           AzwK-3b]
          Length = 297

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 104/304 (34%), Gaps = 16/304 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                + ++ A GLSI  G++G++++       IGAY+ V+ G   G +I+L +P++ ++
Sbjct: 9   LSLTSVLLLIALGLSITYGAMGVINMAHGELVMIGAYTAVLAGIHLGFNIFLSLPLAFVV 68

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK-AGIYVADRLYFLGT 161
           +   G+++    ++     +    L    +   +    +        GI +      L  
Sbjct: 69  AALVGLLIERVVIRRLYGRIIDTLLATWGVAIILQQLIRLEFGLTFFGISIEGLGPGLQN 128

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F    +  + +  ++L     L+A     + RTAI    R I  N +   
Sbjct: 129 MRVPTFMMEPFDLMGLSIQPYRTFILCVTILLTALTWYLVYRTAIGVQVRAIMRNPQMAA 188

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           +    +       FA  S   G+AG   A  R  +         +  ++ +V        
Sbjct: 189 ACGIDVRRVSALTFAYGSGLAGVAGVLLAGFRTVMPEMGATVVVDGFLVVVVG------- 241

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +   +  +         N ++    +  +    +  +    +IL R   L  
Sbjct: 242 -------GVGSLLGTILSSALLGQINGIVSVFSNDIIARAVVFGVV-IAIILWRPRGLFS 293

Query: 342 LRTP 345
            ++ 
Sbjct: 294 FKSR 297


>gi|182433942|ref|YP_001821661.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326774480|ref|ZP_08233745.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|178462458|dbj|BAG16978.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326654813|gb|EGE39659.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 345

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/317 (14%), Positives = 101/317 (31%), Gaps = 21/317 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+  +  +    V+  LL  +          + ++G QI    + A G + V+   G + 
Sbjct: 31  LHAREAGVFAALVLIFLLGTVLSPTFAQSDNLLAVGQQIAQIGIMAVGATFVI-LNGEID 89

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+    YA+ A S  +L S        ++   A+ + A  +                   
Sbjct: 90  LSVGSTYALSAISTGMLISDGWSWPAAMLVGLAVGAVAGLLNGLAVV------------- 136

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           ++      + +    +  G A +        L ++   +  F       +   + M +V 
Sbjct: 137 VLGVPSFIVTLGTLSVFRGIALLISDGAPISLSSSQPGVSEFNLLGQGRLFGIVPMQFVF 196

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                    ++L   R+        +  NQ+A   +   +   KL+AF +S    G+AG 
Sbjct: 197 FAAVAAIGVVLLA--RSRFGFNTYAVGGNQEAARLVGVNVKRVKLTAFVLSGFCAGLAGV 254

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
              +    +     +  E  ++ +++I      GG  ++       A +  +  +     
Sbjct: 255 LGLSFLSYVQGVTGQGLELTVISAVIIGGAALFGGSGTMWGTVIGVAFIGLLQNILNIKG 314

Query: 303 FYYFNSLLKFDCSFNMR 319
              F   +         
Sbjct: 315 ISSFWQTVVTGLVIVAA 331


>gi|163844223|ref|YP_001621878.1| hypothetical protein BSUIS_B0027 [Brucella suis ATCC 23445]
 gi|163674946|gb|ABY39056.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 329

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 53/320 (16%), Positives = 114/320 (35%), Gaps = 28/320 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I  L+  M + GL+++ G +G+L+      Y +GAY       +     WL I +
Sbjct: 24  VLNGAIYGLLLFMVSAGLTLIFGMMGVLNFAHASFYMMGAYFAY--TLQPLTGFWLAILI 81

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I G  G+++    L+    +     L+++     ++ +   I  G          + 
Sbjct: 82  APVIVGIVGVLVERFILRRVHAFGHAHELLVTFGLSVVIAEVIKIFYGN---------FA 132

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + + ++F  F    V Y  +  ++      +   I L L RT I    R+     +
Sbjct: 133 VEYRIPAALQFSAFDLGGVSYPFYRLFIGAVALVMFLLIYLLLTRTRIGIVVRSAIYRPR 192

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM--------------FKFS 264
              +L   +    +  F V +   G+AG+   A                          S
Sbjct: 193 MVEALGHNVPLVFMGVFGVGAFLAGLAGSVAGAFYTTNPNMALELGVMVFVVVVVGGLGS 252

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
               + + +++G ++S+   A    + I  +    G+  Y            +    TL 
Sbjct: 253 LGGTMFASLLIGILSSV---AVGVKVSIASLLDYVGLGDYAREIGGVLTLEVSSIAATLP 309

Query: 325 VIALFLVILMRSHSLLRLRT 344
              + +V+L+R   L   + 
Sbjct: 310 FFLMLIVLLVRPSGLFGAKE 329


>gi|187920439|ref|YP_001889471.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
 gi|187718877|gb|ACD20100.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
          Length = 289

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 78/282 (27%), Gaps = 17/282 (6%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
               V+ A GL+++ G +G+++L        GAY  +I           ++  +   + A
Sbjct: 18  FAYLVLAALGLAVIFGMMGVINLAHGEFIMCGAYVTIITAKHGAPLPLAMLAGALAAALA 77

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
             ++  L               + +     I+ +   +  G +   +            S
Sbjct: 78  GVIVERLVIRHLYDRLFDSV--VATWAISLIVQQTMLLVAGPSIEGIGTPFGSFSLGEYS 135

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
              +        +  +F  Y+L               +T      R    N      L  
Sbjct: 136 FSTYRAVLPGIALAILFGLYLLFF-------------KTNYGVCARATIQNANIAQCLGL 182

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                    FA+ +   G+ GA +A +   +      F         V++GG   ++   
Sbjct: 183 RTDRLYTLTFALGAGLAGLTGALYAPTMTAVPTMGSNFIVQ--AFVSVVVGGANVIAGTT 240

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            A  +L  +           F  +        +       + 
Sbjct: 241 PAAGVLAIIQTALTASYGQLFGQIGLLVTVIVVIRLMPQGLG 282


>gi|154243963|ref|YP_001414921.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154158048|gb|ABS65264.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 294

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 94/311 (30%), Gaps = 20/311 (6%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                  + +  +   IY   A GLS++ G + +++        +  Y   +L +  G+ 
Sbjct: 3   PLTLSFAVINGLLLGGIYGGVALGLSLIFGVMRVINFAHGSFLMLAMYCSYLLWASLGVH 62

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            ++ I    +++      +G          L      +     + L+    +        
Sbjct: 63  PYVSI----LVTVPFLFAVGYVVQSVVISPLIRRERALVVEPTSALLLTAGVYLVVDN-S 117

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           V         +V + I +     + +   +           ++ ++  WL+ + +  A R
Sbjct: 118 VLMAFGPDVRSVTTDITYESIFVAGLPINMARLIGFAAAILVAFALSFWLKHSDMGRAIR 177

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
               N+ A       +       F +  A +G+ GA                S  I    
Sbjct: 178 ATAQNRDAAAMSGINVPLIYNVTFGLGCAVLGLFGALLVPFFSI--TPTIGLSFGIKSFL 235

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +V+LGG+ S+        +L     +          ++  F                 ++
Sbjct: 236 VVVLGGIGSIPGSILGGLLLGVFESVAAQFVTATSAAIFSFG-------------LFIVI 282

Query: 332 ILMRSHSLLRL 342
           +LMR   L+  
Sbjct: 283 LLMRPAGLMGR 293


>gi|117928115|ref|YP_872666.1| inner-membrane translocator [Acidothermus cellulolyticus 11B]
 gi|117648578|gb|ABK52680.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidothermus cellulolyticus 11B]
          Length = 292

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 51/299 (17%), Positives = 99/299 (33%), Gaps = 25/299 (8%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
              +Y + A G +++ G + +++L       + A+    L  R+ +  +L I ++  I  
Sbjct: 14  TGGVYALMASGQTLIFGVMRVINLAQGALVVVAAFLAYTLFGRFHIDPFLAILITTPILF 73

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
             G+ +           L +  L   ++ +  L+    +  G  GI          +   
Sbjct: 74  LIGVAIQW---------LFLRPLRADDLAEMSLLVTFAVALGLEGILTLVYKTDYRSIKP 124

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
                      + I  + +Y  LL +  L   + L L RT +  A R    N  A   L 
Sbjct: 125 VYANDSFVVLGYRITTVRLYAFLLSLAALGV-LYLVLYRTRLGRALRATVQNPTAAQLLG 183

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                     F + +A    AG+ F             +     ++SIVILGG+ S+   
Sbjct: 184 VEAKRVSAMGFGLGAATAAAAGSVFGVVYPF--NPNSHYDLISRLLSIVILGGLGSVGGA 241

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                ++  V  +   +    +                   + L  V+L+R      +R
Sbjct: 242 VLGAVVMGVVSSVVAVVASPTWADFS-------------FFVVLIAVLLVRPQGFFGMR 287


>gi|289582734|ref|YP_003481200.1| inner-membrane translocator [Natrialba magadii ATCC 43099]
 gi|289532287|gb|ADD06638.1| inner-membrane translocator [Natrialba magadii ATCC 43099]
          Length = 370

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/331 (12%), Positives = 87/331 (26%), Gaps = 36/331 (10%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+    +  LI  +   GLS+    L   +         GA+                I
Sbjct: 51  RYVMEGILYGLIMGLAGIGLSMTYSILNFANFAHGDTITAGAFIGWGGTYLIAGWGAASI 110

Query: 97  PVSAMIS----------GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              A++           G       +              L +  I +      +     
Sbjct: 111 GHLALVGPQRGLGGPQLGISVTSTPIAIFGGLLLAGVGTALFVVLIDRLAYKPMRGAGGI 170

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV-------------LLGMCFL 193
              I      + L   +  +       ++  +    +  V             +     L
Sbjct: 171 PLLITSIGVAFALRYIIMFVYSSQSRGTTASVPSADLLLVDGYVSLDAHDGTLIGAAVVL 230

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              + L L+RT +  A R + DN+                 + +     G AG       
Sbjct: 231 MLGVHLMLQRTKLGKAMRAMSDNKDLALVTGIPTERVIRWTWMIGGGLAGSAGYLMVLWT 290

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             I    F +   +++ + VILGG+ S+        ++                 +    
Sbjct: 291 GTIDW-QFGWLLLLLIFAAVILGGIGSIYGAIVGGLVIGV------------SMHMSMIW 337

Query: 314 CSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                  T    + + LV+L++   L   +T
Sbjct: 338 LPGGDFTTITAFLMMILVLLIKPSGLFGGKT 368


>gi|222112621|ref|YP_002554885.1| inner-membrane translocator [Acidovorax ebreus TPSY]
 gi|221732065|gb|ACM34885.1| inner-membrane translocator [Acidovorax ebreus TPSY]
          Length = 286

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 57/297 (19%), Positives = 108/297 (36%), Gaps = 27/297 (9%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           ++Y + A GLSIV G L  ++      Y +GAY      +R+GLS W+ + V  +  GA 
Sbjct: 16  MLYFLLAVGLSIVFGLLRFVNFAHGAFYLLGAYFCY-QMTRWGLSFWIALVVVPLAVGAI 74

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G       L+          +I++     ++ +   +  G  G  VA      G      
Sbjct: 75  GWFTEKLMLRHVYAKAHEFHIIITVGLALVVQELVILQWGPLGDSVAVPDLLQGV----- 129

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                      +Y  +  +V+     L+  +   L  T + +A R   ++ +    L   
Sbjct: 130 -----VMWGSFVYPKYRLFVIGFTAVLAVLLWWVLEGTRLGSAVRAGSESTEMVSLLGLN 184

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           ++      FA+ +A   +AG   A  R              +   IV++GG+ S      
Sbjct: 185 VLRIFSLVFALGAATAALAGVLAAPIRGA--EPFMGIEALGVAFVIVVVGGLGSFGGALV 242

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
              ++  V  +   +              +      ++ +A+  V+L+R H LL  +
Sbjct: 243 GGLLIGIVQSVMSTL--------------WPEGARLMIYVAMAAVLLLRPHGLLGRK 285


>gi|149202459|ref|ZP_01879431.1| branched-chain amino acid ABC transporter (permease) [Roseovarius
           sp. TM1035]
 gi|149143741|gb|EDM31775.1| branched-chain amino acid ABC transporter (permease) [Roseovarius
           sp. TM1035]
          Length = 289

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 98/302 (32%), Gaps = 27/302 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +         + A GL ++ G +G+++      +  GAY+ V L +   L  ++ +P+ 
Sbjct: 10  LNAVYAASYISLVAVGLVLIFGVMGVINFAHGELFMAGAYAVVALYADMHLPFFVAVPIG 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +  G  G++M     +          +        +                       
Sbjct: 70  MIFVGMLGLVMERGLFRPLKGNPLGGLVASIGFLMILQSLAVMGFG------------VR 117

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +  + +     S  V   +   YV++    L +++  +L+RT    A R    + +A
Sbjct: 118 MEHIPPVTQEVWRISDKVGLPVARIYVIVAAVVLLSALWYFLKRTRFGWALRASAQDPEA 177

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                 +I      A  + +A  G+AGA  A             S  +    ++I+GG+ 
Sbjct: 178 AALQGISITQTARIAMFIGAALAGVAGALTAPLVSV--NPHMGHSVIVTAFIVIIVGGVG 235

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           SL     A+ +   V       +      ++                 + +V++++   L
Sbjct: 236 SLEGAIIASVVYAFVHTFVTTFSDGVVADIVGLS-------------LMLVVLIVKPTGL 282

Query: 340 LR 341
             
Sbjct: 283 FG 284


>gi|84502439|ref|ZP_01000575.1| ABC transporter ATP-binding protein [Oceanicola batsensis HTCC2597]
 gi|84389251|gb|EAQ02048.1| ABC transporter ATP-binding protein [Oceanicola batsensis HTCC2597]
          Length = 288

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 93/305 (30%), Gaps = 26/305 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +Y + A G S++ G +  +++       +G Y    +    G     +I   
Sbjct: 9   LNGLTLAALYFLAATGFSLIFGLMRTVNMAHGALLLLGGYVGFSVVEATGSWGLGVIAGG 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
              + A  ++        +GD L      ++       +           + + + L   
Sbjct: 69  LAAALAGALVQFGILGWMQGDELRQTLASIAISIIMADLMLWHWGGITYQVTLPELLSGG 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                      R P   V Y      ++     +  ++   +++T      R   D+Q  
Sbjct: 129 ----------QRLPLLGVGYASIRLALMAFALVIGVALWFLIQKTRFGAVIRAGVDDQAM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   I    +S FA+     GMAG   A++         +F  +   + +VI+GGM 
Sbjct: 179 LRALGFPIKRIFISVFALGGMLAGMAGVVAASALSIAPGTDLQFLLSS--LVVVIVGGMG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+   A    ++    +                               + LV+ +R   L
Sbjct: 237 SVGGAALGALLVGLAEQYGLAYA--------------PTYGAVFTFAIMVLVLAVRPQGL 282

Query: 340 LRLRT 344
           L    
Sbjct: 283 LGRAE 287


>gi|320094320|ref|ZP_08026109.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319978749|gb|EFW10303.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 348

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 91/300 (30%), Gaps = 23/300 (7%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
                  + + I  + +   I ++ A G S+++ S G + L+        A+   +L   
Sbjct: 47  ALNPRFLTPQGIKDLFLNATIAMLMAAGQSLIIQSEG-VDLSVGSILGGSAFLTGVLFVS 105

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                 + + ++    GA    +    +        + TL    +F+  L  W   T   
Sbjct: 106 APGVPIIAVFLAGTALGAALGAVNGLLVTRARVPAMVITLGTLYVFRGALNWWAGSTQYF 165

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
           AG                      F    V   +    + L    + A+I L+ R     
Sbjct: 166 AGDR-----------------PQAFGDLGVATVMGFPLLTLLAVAVVAAISLFQRYARSG 208

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                I  ++ A       +    L AF V+ A +G+ G  +A+  + +        E  
Sbjct: 209 RDLYAIGSDRAAAAVYGIPVGSRVLMAFIVNGAMVGLGGVLYASRFNSVGATTGSGMELD 268

Query: 268 IVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           IV + V+      GG+ +    A    +L  +      +    F           +    
Sbjct: 269 IVAACVVGGVAMTGGVGTAYGAAIGALLLNTMTSALTAIGVDKFWQRAVVGALILVAIVI 328


>gi|295696194|ref|YP_003589432.1| inner-membrane translocator [Bacillus tusciae DSM 2912]
 gi|295411796|gb|ADG06288.1| inner-membrane translocator [Bacillus tusciae DSM 2912]
          Length = 291

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 92/300 (30%), Gaps = 28/300 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                IY + A G  +     G+L+L      A+GA +       +G ++W+ +      
Sbjct: 14  LTIGSIYALIAVGFVVTFSVTGILNLAQGEFAAVGALTAA-SLHMHGAALWVSVLAGTAA 72

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +   G++M    ++       ++ +I++     ++     +  G   + +A         
Sbjct: 73  AVLLGIVMERAVIRPARRIDLLSVVIITIGVDIVIRGAALMIWGADPLTLAPFTDRPPLH 132

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +      ++   +  I  +F   ++               RT    A R    N  A   
Sbjct: 133 LGGATLDWQTVWTVAISGVFFVALIWFF------------RTYQGKAVRAAVMNHTAARL 180

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +          AFAVS+   G+AG   A                +      ++GG+ +  
Sbjct: 181 VGIRPSRLSFYAFAVSAGLGGLAGTIVAPITGA--TYDMGLMLGLKAFVAAVIGGLNNAP 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  ++  +     G+               +     +  I L L++ +R   L   
Sbjct: 239 AAVLGGLLVGLLEAFTAGLIS-------------SDYRDAITFIVLLLMLFVRPSGLFGR 285


>gi|260757205|ref|ZP_05869553.1| LOW QUALITY PROTEIN: predicted protein [Brucella abortus bv. 6 str.
           870]
 gi|260883011|ref|ZP_05894625.1| LOW QUALITY PROTEIN: predicted protein [Brucella abortus bv. 9 str.
           C68]
 gi|260677313|gb|EEX64134.1| LOW QUALITY PROTEIN: predicted protein [Brucella abortus bv. 6 str.
           870]
 gi|260872539|gb|EEX79608.1| LOW QUALITY PROTEIN: predicted protein [Brucella abortus bv. 9 str.
           C68]
          Length = 499

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 57/137 (41%)

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            +  +L    + A ++ ++  + +  +W  +R +++A  +   +I  AKLSAFA+S+   
Sbjct: 84  YFLFVLLAYGIIAVVLEFISHSRLGASWLAVRHSERAAAANGISIPRAKLSAFAISAFIS 143

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G++G   A     +  + F   +++ + ++  + G            +++   EL   +N
Sbjct: 144 GISGGLLAGYLGTLVAENFSMMQSLALFAVATMAGAHFTLGALIGGVLIVLFPELLRRLN 203

Query: 303 FYYFNSLLKFDCSFNMR 319
                  + F       
Sbjct: 204 LPQDIGNVFFALGAVQA 220


>gi|255261288|ref|ZP_05340630.1| branched-chain amino acid ABC transporter, permease protein
           [Thalassiobium sp. R2A62]
 gi|255103623|gb|EET46297.1| branched-chain amino acid ABC transporter, permease protein
           [Thalassiobium sp. R2A62]
          Length = 291

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 97/295 (32%), Gaps = 26/295 (8%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG- 107
           Y M A GL+++   + +L+      Y IG +       ++G+   L + +S +     G 
Sbjct: 17  YAMIALGLTLIFALMNVLNFAHGQMYVIGGFVTYTFYGQWGVPFVLALFMSCITLAIVGA 76

Query: 108 -MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
            +   L +   +G     +T++++     +L     +  G+               V  +
Sbjct: 77  LIERYLFAPVIKGSAREESTMLLAAGIAFLLDALILLIFGEK-----------QRGVPKI 125

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
           +         +I       + +       + I  ++ +    A R +  ++ A   +   
Sbjct: 126 VDGVFNWDFRLIMPYDRILICILAILSIVAFIALMQYSKTGRALRALAQDRTAAQLMGVN 185

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +    +  FA+ +   G+ G                   +I    +V++GG   +S    
Sbjct: 186 VDRYSMIGFALGAMLAGLVGGLLVTITGI--NLGMGGPTSIKAFMMVMIGGAGVISGAIW 243

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              IL  +               L +   +      L+ ++L + + +R   L+ 
Sbjct: 244 GGFILGFMEAF-----------GLAYLSQYGDITYLLIFVSLMIFLAIRPQGLMG 287


>gi|194292065|ref|YP_002007972.1| branched-chain amino acid inner-membrane translocator [Cupriavidus
           taiwanensis LMG 19424]
 gi|193225969|emb|CAQ71916.1| Branched-chain amino acid inner-membrane translocator [Cupriavidus
           taiwanensis LMG 19424]
          Length = 285

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 110/304 (36%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++Y + A GLSIV G L  ++      YA+GAY       ++G++ W+ +  
Sbjct: 8   VINGVGIGMLYFLLAVGLSIVFGLLRFVNFAHGAFYALGAYLC-FQALQFGMNFWVALVF 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I GA   +     L+          ++++      + +   +  G  G+ V      
Sbjct: 67  APIIIGALAWLTEKVMLRHVYAQPHEFHILVTVGLALAIQELIIVGWGPLGVDVPPPDAL 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  +              +Y  +  +V+     L+  +   L  T + +A R   ++ +
Sbjct: 127 QGVVMWGDF----------VYPKYRLFVIAFTGLLAIGLWWLLEGTRLGSAVRAGSESTE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       FA+ +A   +AG   A  R              +   +V++GGM
Sbjct: 177 MVSLLGINVFRLFSLMFALGAATAAIAGVLAAPIRGA--EPFMGVEALGVAFIVVVVGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +       ++  V  L   +              +      ++ +A+  V+L+R H 
Sbjct: 235 GSFTGALVGGLLVGVVQSLMSTL--------------WPEGARLMIYVAMAAVLLLRPHG 280

Query: 339 LLRL 342
           LL  
Sbjct: 281 LLGR 284


>gi|169830853|ref|YP_001716835.1| inner-membrane translocator [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169637697|gb|ACA59203.1| inner-membrane translocator [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 294

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 50/309 (16%), Positives = 92/309 (29%), Gaps = 25/309 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ S      IY + A GL +     G+ +L       +GA   + L +     +    
Sbjct: 9   QYLISGLTLGSIYALIAIGLVVTFNITGIFNLALGEFVTLGALVSIALYAAGLPLVAAFA 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                 +    ++        R     I TL++  I   I I+   +       Y     
Sbjct: 69  LAVLFAAALGALMERAAIHPARKADATILTLVIITIGVGIAIRGASLLIWGTHPYTLPAF 128

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                          F     +     ++VL       A++  +   T +  A R    N
Sbjct: 129 SQHAP----------FTVGGAVVIPQSFWVLGLAVVCVAALFAFFEFTYLGKAVRACVMN 178

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +        L+AFA + A   +AG F        +     F   +      ILG
Sbjct: 179 RTAARLVGINPQRLSLAAFAATGALGALAGIFITP--ITFATYDMGFMLGLKGFVAAILG 236

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+T++        +L  +     G+        +               I +  V+L+R 
Sbjct: 237 GVTNVPGAIIGGFLLGILEAFGVGLVGSGLKDAVAM-------------IVMIAVMLVRP 283

Query: 337 HSLLRLRTP 345
             +L     
Sbjct: 284 TGILGAFRR 292


>gi|119896412|ref|YP_931625.1| ABC transporter permease [Azoarcus sp. BH72]
 gi|119668825|emb|CAL92738.1| ABC transporter permease protein [Azoarcus sp. BH72]
          Length = 294

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 103/315 (32%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              + +      +    I    Y + + GL+I+ G L +++      Y +GA+   I  +
Sbjct: 3   IFGVPSALFGSQLLIGLINGSFYAILSLGLAIIFGLLNIINFAHGAQYMMGAFVAWIALT 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
           ++G++ W+ + +S ++ GA G+++    L+       +  L+++     I         G
Sbjct: 63  KFGVNYWVALLLSPILIGALGVVLERTMLRKLYKLDHLYGLLLTFGLALIFEGIFRDQYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G                          F+   I+  +V++    +       + +T +
Sbjct: 123 ISGQAYEVP----------DALKGGVNLGFMFMPIYRGWVVVAALAVCFGTWFMIEKTKL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N +   +L   +       +    A    AG   A             +  
Sbjct: 173 GAYLRAGTENPQIVQALGINVPLLITFTYGYGVALAAFAGVLAAPIYQV--SPQMGANLI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+         L  +  L           ++ F              
Sbjct: 231 IVVFAVVVIGGMGSIMGSIVTGLGLGLIEGLTRVFYPEASAVVVFFIMVIV--------- 281

Query: 327 ALFLVILMRSHSLLR 341
                +L+R   L  
Sbjct: 282 -----LLVRPAGLFG 291


>gi|118473797|ref|YP_887300.1| branched-chain amino acid ABC-type transporter, permease
           [Mycobacterium smegmatis str. MC2 155]
 gi|118175084|gb|ABK75980.1| branched-chain amino acid ABC-type transport system, permease
           component [Mycobacterium smegmatis str. MC2 155]
          Length = 294

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 89/291 (30%), Gaps = 27/291 (9%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI--WLLIPVSAMISGACGMIMGLPSLK 116
             G +G++++        G Y+  ++      +    L+  V   + G     +   +L 
Sbjct: 28  TFGQMGVINMAHGEFIMAGCYTAYVVQQVISSAGASLLISLVVGFLVGGAMGALLEVTLI 87

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
            R  +  + TL+++     IL +      G   + V    +  G                
Sbjct: 88  QRMYHRPLDTLLVTFGVGLILQQIARDIFGAPAVNVVAPSWLSG----------GVEILG 137

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
            +      ++L+      A +   L+ + +    R +  N+    +   +     ++ F 
Sbjct: 138 AVVPKTRIFILVLAVVCVAVLATVLKASPMGRRIRAVVQNRDLAETSGISSRKTDITTFF 197

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
           + S    +AG   A +    +      S  I    +V++GG+  +     A   L  +  
Sbjct: 198 IGSGLAAVAGV--ALTLIGSTSPTIGQSFLIDAFLVVVVGGLGQIKGTVIAALTLGFLNS 255

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                       ++ F                   + +R   L  +RT S 
Sbjct: 256 FIEYNTTASLAKVIVFVIIVIF-------------LQVRPQGLFTVRTRSL 293


>gi|89096495|ref|ZP_01169387.1| beta-methylgalactoside transporter inner membrane component
           [Bacillus sp. NRRL B-14911]
 gi|89088510|gb|EAR67619.1| beta-methylgalactoside transporter inner membrane component
           [Bacillus sp. NRRL B-14911]
          Length = 339

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/296 (9%), Positives = 82/296 (27%), Gaps = 6/296 (2%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                 S     ++  Q    ++ A G++ ++ + G   L+      + A     +    
Sbjct: 33  ASPDFLSITNFINILSQSSSRIIIALGVAGILITAG-TDLSAGRLVGLAAVVSASMLQAS 91

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
             +  +   ++ +      +I    +  F      I +      F   L     +    +
Sbjct: 92  DYAYKMYPNLAELPIIVPILIAMAVTGLFGALNGVIVSKFHVPPFIATLGMMIGVYGVTS 151

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
             +             S            I +  + Y+++    +S  I +   +T +  
Sbjct: 152 IYFDRPPYGAQPIGGLSQSFTTFAQRGIPIGQYELPYLVIYAAIVSIIIWVIWNKTQLGK 211

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N +A       +    +  + ++    G +G   A      + +     E   
Sbjct: 212 NMYAIGGNPEAAKVSGVNVARNIILIYLIAGLLYGFSGTLEAGRVGSATNNTGNMYELDA 271

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           + + V+      GG+ ++  +     I   +      +    +   +       + 
Sbjct: 272 IAACVVGGVSLSGGIGTVPGVITGVLIFQIINYGLAFLGVSPYIQFIVKGAIIIVA 327


>gi|296533639|ref|ZP_06896199.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Roseomonas cervicalis ATCC 49957]
 gi|296266035|gb|EFH12100.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Roseomonas cervicalis ATCC 49957]
          Length = 304

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 96/297 (32%), Gaps = 15/297 (5%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           +  + A GL++V G +G+++L     Y +G             + W+     + +     
Sbjct: 17  MLFLLAAGLTLVFGIMGVINLAHGSLYMVG----------AFAAAWVAAETGSALLATLA 66

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
            +          ++L +  L   +    +L  +  I        +      L   + + +
Sbjct: 67  GLAAAALAGMAVEFLVLRRLYARDHLDQVLATFGLILFFNQATVLLFGRQPLFVDIPAPL 126

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
           R        + Y  +   ++L    ++  +   ++RT      R    +++   +L   +
Sbjct: 127 RGTVELLPGLPYPAYRLAIILVGLLVAGGLYWLIQRTRTGMLVRAGATHREMVRALGVDV 186

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
                  F + +   G+AG                    I    +V++GG+ S+      
Sbjct: 187 RLLYTLVFGLGALLAGLAGLMAGPLFSV--QVGMGEQILITTFVVVVIGGIGSVRGALAG 244

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL---MVIALFLVILMRSHSLLR 341
             ++  V  L           +++   +  +        + + + LV+L+R   L  
Sbjct: 245 AMLVGLVDTLLRAYLPATLRGVMQGPDADALAAGLASMGVYLLMALVLLLRPRGLFP 301


>gi|288922965|ref|ZP_06417123.1| inner-membrane translocator [Frankia sp. EUN1f]
 gi|288345677|gb|EFC80048.1| inner-membrane translocator [Frankia sp. EUN1f]
          Length = 439

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/316 (11%), Positives = 84/316 (26%), Gaps = 26/316 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +Y  +  L+AV            T        +        +     +++    G    +
Sbjct: 129 RYALVGLLVAVALFFCFLPASSETFPTAANLRILAANQAVTLLLALAALIPLVAGHFDFS 188

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
              + A  +     L       + L + V+       G++ G+     + +         
Sbjct: 189 VGASAATASVLCAGLMQNNHAPLALAVVVALAAGLGIGLVNGVAVAWLKMNAFVSTL--- 245

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                           G    + A           +LI F       +   +F+  ++  
Sbjct: 246 ----------ATATVLGGFIQWYAHGQSISNNISTALIDFGSTTWLGIPRPVFLVALVAA 295

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
             +          +T    +   I +N +A   +  +     L AFA +    G+AG   
Sbjct: 296 ALWYVLG------QTPYGRSLYAIGENPRAARLVGISTRGYPLLAFAGAGLVAGIAGVVL 349

Query: 250 AASRDRISPDMFKFSENIIVISIVILG------GMTSLSKIAKATAILIGVVELCCGMNF 303
            A     + D          ++ V LG      G  ++       A++   V        
Sbjct: 350 TARTAGATADNGTTML-FPALAAVFLGATAIRPGRFNVFGTVFGVALVAVSVSGLTLAGT 408

Query: 304 YYFNSLLKFDCSFNMR 319
             + + +    +  + 
Sbjct: 409 SDWVNPVFNGGALAVA 424


>gi|163736465|ref|ZP_02143884.1| inner-membrane translocator [Phaeobacter gallaeciensis BS107]
 gi|161390335|gb|EDQ14685.1| inner-membrane translocator [Phaeobacter gallaeciensis BS107]
          Length = 440

 Score = 59.1 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 94/270 (34%), Gaps = 21/270 (7%)

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
             P   +++     ++G  +L  R DYLAIATL ++EI  ++L     ++ G   +    
Sbjct: 171 AWPAGGLLAAGVAWLIGKTALGLRSDYLAIATLGIAEIIISVLKNEDWLSRGVKNVVGLP 230

Query: 155 RLYFLGTTVRSLIR---------FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           R       +++                 +S +  ++    +   +      +     ++ 
Sbjct: 231 RPLPYEVDLQNDAAFAAKAADYGLDPVLASTLYVKLGYSLLFTVVLLALLWMAQMALKSP 290

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS- 264
                R IRDN+ A  ++   +    L  F + SA  G+AGA       +++P  +    
Sbjct: 291 WGRMMRAIRDNEVAAEAMGKDVTRRHLQIFILGSAICGIAGAMMTTLDSQLTPGTYNPLR 350

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
              ++  +VI+GG  +         ++  +      M      +L       N     L+
Sbjct: 351 FTFLIWVMVIVGGSGNNFGAVLGGLLIWFLWIKVEPMGILLIETLTAGMADTNALKVHLL 410

Query: 325 -----------VIALFLVILMRSHSLLRLR 343
                       + L LV+      L+  R
Sbjct: 411 ESASHMRLLTMGLILLLVLRFSPRGLIPER 440



 Score = 38.3 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 39/96 (40%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
            L +  ++       FL  + S      +    L+  + A G+++  G  GL ++  +  
Sbjct: 11  FLFVGVLILLEGSTNFLFFSGSWNSALVILNMGLVSAIMAIGVNLQWGFAGLFNVGIMGF 70

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMI 109
            A+G  + V++ +      W    V  +++ A G +
Sbjct: 71  VALGGLAVVLVSTAPTPGAWSQGGVGIIMALAMGAM 106


>gi|299134326|ref|ZP_07027519.1| inner-membrane translocator [Afipia sp. 1NLS2]
 gi|298591073|gb|EFI51275.1| inner-membrane translocator [Afipia sp. 1NLS2]
          Length = 286

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 93/303 (30%), Gaps = 28/303 (9%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +  + A G S++ G + +++L+    + +GAY  +            ++   
Sbjct: 9   LNGLAFGSLLFILASGFSLIFGLMRIVNLSHGAYFMLGAYVGLSAIEAGVNFWVAILLGG 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             I     +I      +  G  LA   + +   F          T     + +   L   
Sbjct: 69  VAICILGTLIERFVLRRLNGQPLAQVLVTLGIAFIIADACVWIWTGDPRRVPMPSELT-- 126

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                       F  + + + I+  +V+     L+A++   L R+ +    R   D+   
Sbjct: 127 ----------GAFRVAHLAFPIYRLFVIGVAFALAAALWFLLERSRLGAMIRAGVDDLAM 176

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             ++           F + SA  G  G                     + + +VILGG+ 
Sbjct: 177 ARAMGIRTSLLFSVVFCLGSALAGAGGVLAGPILSVYPGLDTDMLP--LALVVVILGGVG 234

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           SL      + I+  +      +              F      ++ + + LV+ +R   L
Sbjct: 235 SLLGAFVGSLIIGFIYSYGQAL--------------FPDLAYVILFLPMVLVLTLRPTGL 280

Query: 340 LRL 342
              
Sbjct: 281 FGR 283


>gi|251791727|ref|YP_003006448.1| ribose ABC transporter permease protein [Dickeya zeae Ech1591]
 gi|247540348|gb|ACT08969.1| inner-membrane translocator [Dickeya zeae Ech1591]
          Length = 322

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/313 (10%), Positives = 92/313 (29%), Gaps = 25/313 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLILIAVVSSMSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  I-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           + GA +  I+G        +   ++       G  + +   + +     +  +++     
Sbjct: 82  LTGAVAASIVGLEINALAAVFAALALGAVIGAGTGIIVAKGRVQAFIATLVMMLLLRGVT 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +     PI  G +                            +   + +   +  M  + 
Sbjct: 142 MVYTNGSPINTGFS------------------DAADALGWFGIGRPLGVPTPIWIMAVVF 183

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    L  T I      +  N+ A      ++   K+  +++      +AG    A   
Sbjct: 184 LATWYMLHHTRIGRYIYALGGNEAATRLSGISVDRVKIVVYSLCGLLSALAGIIEVARLS 243

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++V     + GG   +        IL  +      +    +  +
Sbjct: 244 SAQPTAGTGYELDAIAAVVLGGTSLSGGKGRVVGTLIGALILGFLNNGLNLLGVSSYYQM 303

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 304 IVKAVVILLAVLV 316


>gi|261420679|ref|YP_003254361.1| inner-membrane translocator [Geobacillus sp. Y412MC61]
 gi|319768350|ref|YP_004133851.1| inner-membrane translocator [Geobacillus sp. Y412MC52]
 gi|261377136|gb|ACX79879.1| inner-membrane translocator [Geobacillus sp. Y412MC61]
 gi|317113216|gb|ADU95708.1| inner-membrane translocator [Geobacillus sp. Y412MC52]
          Length = 314

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 103/312 (33%), Gaps = 24/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  ++L +      +     ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 16  LIGLFLLCIVLSILSNDFLTMDNWLNLLRQVSINALIAFGMTFVI-LTGGIDLSVGSVLA 74

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + ++       ++    +++G     +    +        IATL     F+ 
Sbjct: 75  LSSAITAGMMTQGINGFVAILV--GLLAGMVMGALNGVIITKGKVAPFIATLATMTAFR- 131

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                        G+ +        T   S    F+       + I +  +L+ M +++ 
Sbjct: 132 -------------GLTLVYTDGRPITGFASDDILFQMMGRGYFFGIPVPIILMLMVYIAL 178

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++L  ++T        +  N++A       +   K+  +A++ A   +AG    +  + 
Sbjct: 179 YVVL--KKTTFGRHTYAVGGNEEASRLSGLGVDRLKIYVYALTGALSALAGLILTSRLNS 236

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +N   F   +
Sbjct: 237 AQPTAGTAYELDAIAAVVLGGTSLSGGKGWIFGTLVGALIIGVLNNGLNLLNVSSFYQQV 296

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 297 IKGAVILLAVLL 308


>gi|212712662|ref|ZP_03320790.1| hypothetical protein PROVALCAL_03757 [Providencia alcalifaciens DSM
           30120]
 gi|212684878|gb|EEB44406.1| hypothetical protein PROVALCAL_03757 [Providencia alcalifaciens DSM
           30120]
          Length = 320

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 83/312 (26%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      +   +    A+ +        + +                + F  
Sbjct: 82  LTGAVAASMVGADVNAFVAVAGALALGAAIGACTGVIVAK------------GKVQAFIA 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +    L  +F       I       V++      A
Sbjct: 130 TLVMMLLLRGVTRVYTDGSPINTGFSDNADLFGWFGIGRPLGIPTPVWLMVIVF-----A 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T +      +  N+ A       +   K+  +A+      +A     A    
Sbjct: 185 AAWYMLHHTRLGRYIYALGGNESATRLSGINVDKIKIIVYALCGLLAALASVIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +       ++
Sbjct: 245 AQPMAGNGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGISSNYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|239831064|ref|ZP_04679393.1| monosaccharide-transporting ATPase [Ochrobactrum intermedium LMG
           3301]
 gi|239823331|gb|EEQ94899.1| monosaccharide-transporting ATPase [Ochrobactrum intermedium LMG
           3301]
          Length = 330

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/326 (10%), Positives = 97/326 (29%), Gaps = 27/326 (8%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           S+FS  L +    + +   V  ++  +      +     ++  Q+ +  + A+G++ V+ 
Sbjct: 18  SLFSSPLVRQYGGIIISLAVLCVVFAVLNPRFLAFNNFMNIMQQVAVIAVAAYGMTYVI- 76

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
            LG + L+     A+         +     +  ++   A  +                  
Sbjct: 77  LLGEIDLSIGSIIAVSGMVAAQAFAMGFGFVPTVVFTLAAGAIMG--------------- 121

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                  ++ +    L+    I            +         +I    + +      +
Sbjct: 122 ------GLNGVLSAKLMLPSFIVTVATMGIYRGMVSLPTNGAPEIIDNDAWLAIGSESWL 175

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +  ++  +  L     + L +T           N++A       +   K+  F +S   
Sbjct: 176 GLPIIIWIVGVLFIFNYILLSKTVFGRRIYLSGGNKEAAIYSGIRVDRIKIIVFMLSGVM 235

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVE 296
             ++G   ++       +     E   + ++V     + GG+ ++        I+  +  
Sbjct: 236 AAISGILLSSRLSSAQTNAGMGYELDAIAAVVLGGTSLAGGVGTMVGTILGALIIGVINN 295

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               ++  YF  L+       +    
Sbjct: 296 GMNMLSVPYFYQLIVKGVVILVAVWL 321


>gi|297195951|ref|ZP_06913349.1| sugar ABC transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197718845|gb|EDY62753.1| sugar ABC transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 331

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 88/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               V+  L   L      S      +  Q+++    A G ++++ + G + L+C    A
Sbjct: 29  LAALVLACLFFSLTTEQFLSGGNFSLIVQQVMVVGTLAIGQTLIILTAG-IDLSCGAVMA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            G+       +   LS    I +  ++ G  G++ GL               I++    N
Sbjct: 88  FGSIVIARTAADGTLSPLAAIALGLVVCGGFGLLNGLLVQMIPLPPF-----IVTLGMLN 142

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +      I + +  +                        +F +    + Y  L    L  
Sbjct: 143 VAFALTHIYSAEQTVTDLPAP------------LTALGETFPLGGTDITYGSLVTIALFL 190

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T+       + ++ ++            +  + ++    G+A     +    
Sbjct: 191 AFAYALSSTSWGRHVYALGNSPESARLNGIRTSRLTIGIYTLAGLVYGVAALLLVSRTGV 250

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P   +      + ++V+      GG  ++        I+         M        L
Sbjct: 251 GDPQAGQTDNLDSITAVVLGGTSLFGGRGAVLGTFIGVLIVGVFRNGLQLMGVASIYQTL 310

Query: 311 KFDCSFNMRHTT 322
                  +  T 
Sbjct: 311 ITGILVILAVTV 322


>gi|94986782|ref|YP_594715.1| branched chain amino acid ABC transporter, permease protein
           [Lawsonia intracellularis PHE/MN1-00]
 gi|94731031|emb|CAJ54394.1| branched chain amino acid ABC transporter, permease protein
           [Lawsonia intracellularis PHE/MN1-00]
          Length = 300

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 91/305 (29%), Gaps = 17/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A G ++V G L L++      + IGAY    L    GLS       
Sbjct: 8   IINGVAIGGIYALVALGYTMVYGVLKLINFAHGELFTIGAYIGFTLLFSLGLSTLAEPIA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++     +I+    +                      +             +      
Sbjct: 68  IGLVMFTIFVIVAFLGVLLERTAYRPLRKANRLSAVVSALGASIFL---QNAIMLIYGGN 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +           V        ++    FL  ++  ++ +T+I  A + +  +Q 
Sbjct: 125 FYVYPETFFPSLSLDIFGVHISFMRLIIISISFFLMVTLYFFVNKTSIGMAIKAVAIDQI 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F + +   G+AG        +IS  M  +   +   +  ILGG+
Sbjct: 185 TARLMGINVNKIISLVFFIGAGLGGIAGVMVGMYYGQISFTM-GWLYGLKAFTAAILGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L  V  L        +   + F               L +++++R   
Sbjct: 244 GNIPGAMLGGLLLGVVETLAASYLSIGWKDAVAF-------------FILIIILVVRPTG 290

Query: 339 LLRLR 343
           LL  R
Sbjct: 291 LLGER 295


>gi|18314011|ref|NP_560678.1| branched-chain amino acid transport permease protein [Pyrobaculum
           aerophilum str. IM2]
 gi|18161587|gb|AAL64860.1| branched-chain amino acid transport permease protein [Pyrobaculum
           aerophilum str. IM2]
          Length = 319

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 84/297 (28%), Gaps = 12/297 (4%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           IYV+ + GL++   +  + S        IGAY          L   L   +         
Sbjct: 21  IYVLLSLGLNLTYITTKIPSFAHGDLATIGAYVSYYTIVFLLLPFGLSASIYLTFPLVAL 80

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +   +    +   +  +           I               +AD        +   +
Sbjct: 81  VTGLVALATYIAVFRPMIRRGAGITPLMIASFGVHYVLFAIVAIIADYTRNTYQILSRNV 140

Query: 168 RFFRFPSSFVIYEIFMYYVL---LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
              R+   +   +     ++   + +  ++  +   L RT      R   DN     ++ 
Sbjct: 141 LLSRWEFIWPGTDFLTSSLINTTIIVIVVTLLLYFLLYRTRYGVIMRASIDNLYLAKAVG 200

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
             I      A+ +  A  G+AG + A        +   +    ++    ++GG++S+   
Sbjct: 201 INIERVFAVAWLLIGAVTGIAGIYMAMFFPM--TEELGWLRLPVIFVASVVGGLSSIYGA 258

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                ++   + L             +F          +    +  ++L     L  
Sbjct: 259 VLGGYVVGLSLVLGATYILTPLGVPTEF-------QLVIPFAFVIAILLFAPQGLAG 308


>gi|162453767|ref|YP_001616134.1| D-xylose ABC transporter, permease protein [Sorangium cellulosum
           'So ce 56']
 gi|161164349|emb|CAN95654.1| D-xylose ABC transporter, permease protein [Sorangium cellulosum
           'So ce 56']
          Length = 366

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/342 (12%), Positives = 104/342 (30%), Gaps = 33/342 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  L  ++        G   + + +  +  Q+ +  + A G+ +V+   G + L+
Sbjct: 13  RALSMVGSLIAIWVAFSITTDGTFVTPRNLTLLARQMSVTSILAIGMVMVI-VAGQIDLS 71

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +   S  ++    G  +     +  ++    G + G    + R     +    M
Sbjct: 72  VGALAGLLGASSAMIYVSLGWPLPAAFILPLLLGAVLGFVQGTLVARLRIPPFIVTLGGM 131

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLG---------------------------TT 162
                ++L     ++   A  Y+     ++                              
Sbjct: 132 LIFQGSMLGLTGGVSISPARPYLFVGQAYVPHTLGWAGAGVLCVGLLYKAARATGTARYP 191

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
              L  F    ++ +     + + +L +  L+    +  + T        I  N++A F 
Sbjct: 192 WIGLAVFSLAFAALMNSYEGVPFPVLVVLVLATVFTVLAKHTTFGRHLYAIGGNREAAFY 251

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGG 277
              +I    ++ F +     G+AG    A     + D  +  E   + + VI     LGG
Sbjct: 252 SGISIDRHLIAVFTLMGVMAGIAGVVLTARVGSATSDAGRMMELDAIAAAVIGGTSLLGG 311

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
             ++        ++  +      MN   F   +       + 
Sbjct: 312 QGTIWGALLGALVMASLDNGMSLMNTESFWQPIIKGIILILA 353


>gi|126464302|ref|YP_001045415.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
 gi|221370037|ref|YP_002521133.1| Inner-membrane translocator precursor [Rhodobacter sphaeroides
           KD131]
 gi|126106113|gb|ABN78643.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
 gi|221163089|gb|ACM04060.1| Inner-membrane translocator precursor [Rhodobacter sphaeroides
           KD131]
          Length = 289

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 93/303 (30%), Gaps = 28/303 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A GL+++ G L + +      Y +GA+    +          +   
Sbjct: 9   LVNGLALGSTYALVALGLTLIFGVLLIPNFAHGEFYMLGAFLTYAMVLAGMNFWLAMALA 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +     ++  L              +        +      I  G+A    A     
Sbjct: 69  VGAVILLGCLVDRLAFKPVEQAPPLSMMISALAASIILQQSAMLIWGGEARTIPAPVTGV 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L T    +                   V+  +   +A + L L R+ +  A R +  N+ 
Sbjct: 129 LRTPFFIVTWMQ-------------LIVMASLLLAAAGVWLVLNRSRLGLAIRAVAQNRD 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +  ++   +L+ FA+ +A   +AGA   A+           +  +    +++LGG+
Sbjct: 176 AALLMGISMFQVRLATFAIGAALGAIAGALLGATFPI--YPTMGVNPVLKAFVVLVLGGI 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL         L  V  +  G      + +  F               L  V+L+R   
Sbjct: 234 GSLPGAVFGGLFLGVVEVMVAGYISSELSDIGAF-------------AILVAVLLLRPQG 280

Query: 339 LLR 341
              
Sbjct: 281 FFG 283


>gi|238023897|ref|YP_002908129.1| inner-membrane translocator [Burkholderia glumae BGR1]
 gi|237878562|gb|ACR30894.1| Inner-membrane translocator [Burkholderia glumae BGR1]
          Length = 345

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/311 (15%), Positives = 96/311 (30%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +V  L   L      + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 46  VLLVLCLGFGLLTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAS 104

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A + ++  +  G   WL +P++  +  A G   G+     R     +    M+       
Sbjct: 105 AVAALLASTIPGW-GWLGVPIALGVGLAFGAANGVLIAFLRLPPFIVTLGAMT------A 157

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++      G        +L               F          + ++++  C + A  
Sbjct: 158 VRGVARLIGNDTTVFNPQLP--------------FAFIGNGTVFGLPWLVVIACAVIALS 203

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +    L  +A S    G+     AA     +
Sbjct: 204 WFILRRTVLGMRIYSVGGNPEAARLSGINVRAINLFVYAASGLLAGLGAVMSAARLYAAN 263

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 264 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLTNGLVLLGVSDVWQYII 323

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 324 KGLVIIGAVAL 334


>gi|237730555|ref|ZP_04561036.1| ribose transport system permease rbsC [Citrobacter sp. 30_2]
 gi|226906094|gb|EEH92012.1| ribose transport system permease rbsC [Citrobacter sp. 30_2]
          Length = 355

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 85/300 (28%), Gaps = 10/300 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      + +    +   +  M   + I  + A G+++V+   G + L+      
Sbjct: 17  FIALLLVIAFFSVMVPNFLTTSNLLIMTQHVAITGLLAIGMTLVI-LTGGIDLSVGAVAG 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I       L +         I    +      + +    + F    +     +   I   
Sbjct: 76  ICGMVAGALLTNGLPIWGGNIIFFNVPEVIICVALFGVVVGFVNGAVITRFGVAPFICTL 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            ++         + +   D   +        +    F +      + +Y  +  M     
Sbjct: 136 GMMYVAR----GSALLFNDGSTYPNLNGMDALGNTGFATLGSGTLLGIYLPIWLMIAFLL 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +T +      I  N+ A       I+ AK+  +A S       G   A+    
Sbjct: 192 LGYWVTTKTPLGRYIYAIGGNESAARLAGVPIVKAKIFVYAFSGLCAAFVGLIVASQLQT 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + V     + GG   +S       +++ + +    M    F  ++
Sbjct: 252 AHPMTGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFLADGMVMMGVSDFWQMV 311


>gi|152981606|ref|YP_001351788.1| branched chain amino acid ABC transporter permease
           [Janthinobacterium sp. Marseille]
 gi|151281683|gb|ABR90093.1| Branched-chain amino acid ABC-type transport system, permease
           components [Janthinobacterium sp. Marseille]
          Length = 293

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 94/307 (30%), Gaps = 21/307 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +   Q  +  + A GL ++ G   +++L C   YA+GAY  + + S        +   
Sbjct: 8   LLAGIFQAAVLFLVASGLQLIFGVQRIINLACGSIYALGAYFGIFVTSWALSKGLPVHLF 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ GA  +I  +     R            ++     +        +       +   
Sbjct: 68  PFVLLGAGIVIGLIGIPLERLIRTIYNRPESFQLLLTFAVMLMFQDVLRFFWGADPQQLP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +     +  F      V    +   V+     L+  +  +L +T      R   +N++
Sbjct: 128 NVSMTFGTMSAFG-----VSMPTYNVMVIAVAVTLAIGMAYFLGKTKTGKILRATAENRE 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              ++   +    +  F + +    + GA      +  +         +   ++V++GG+
Sbjct: 183 TSAAMGINVTRVYVMVFTLGTMLGTIGGALVIP--NAAASLEMGVELVVEAFAVVVIGGL 240

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A    I+  +  L                  +       +   +  V++ +   
Sbjct: 241 GSMKGAAVGALIVGLIRALSAMY--------------YPEAEILAIYAIVLAVLIWKPAG 286

Query: 339 LLRLRTP 345
           L      
Sbjct: 287 LYGKAEA 293


>gi|329996170|ref|ZP_08302415.1| ribose ABC transporter permease protein [Klebsiella sp. MS 92-3]
 gi|328539470|gb|EGF65474.1| ribose ABC transporter permease protein [Klebsiella sp. MS 92-3]
          Length = 355

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/300 (11%), Positives = 83/300 (27%), Gaps = 10/300 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      + +    +   +  M   + I  + A G+++V+   G + L+      
Sbjct: 17  FIALLLVIAFFSVMVPNFLTASNLLIMTQHVAITGLLAIGMTLVI-LTGGIDLSVGAVAG 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I       L +         I    +      + +    +      +     +   I   
Sbjct: 76  ICGMVAGALLTNGLPLWNGDILFFNVPEVILCVAIFGVLVGLVNGAVITRFGVAPFICTL 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            ++         + +   D   +        +    F +      + +Y  +  M     
Sbjct: 136 GMMYVAR----GSALLFNDGSTYPNLNGMEALGNTGFATLGSGTLLGVYLPIWLMIGFLV 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +T +      I  N+ A       I+ AK+  +A S       G   A+    
Sbjct: 192 LGYWLTTKTPLGRYIYAIGGNESAARLAGVPIVKAKIFVYAFSGLCAAFVGLIVASQLQT 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + V     + GG    +       +++ + +    M    F  ++
Sbjct: 252 AHPMTGNMFEMDAIGATVLGGTALAGGRGRGTGSIIGAFVIVFLADGMVMMGVSDFWQMV 311


>gi|291558053|emb|CBL35170.1| monosaccharide ABC transporter membrane protein, CUT2 family (TC
           3.A.1.2.-) [Eubacterium siraeum V10Sc8a]
          Length = 345

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/319 (12%), Positives = 96/319 (30%), Gaps = 11/319 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  V+Y   +          +   ++  +    ++ + G+S+V+   G + ++     
Sbjct: 25  IAIFVVMYICAMIFIGSGFTKVQTFFNILNENAALIILSCGMSLVM-ITGGIDISVGAVT 83

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      +     G ++   I ++  I  A G++ G         YL I   I++    
Sbjct: 84  ALVCMCCAMNLDYGGGNVVTSILIALGIGTAFGLVQGYLI-----AYLEIQPFIVTLAGM 138

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                   I N        +    L     SL               ++   ++    + 
Sbjct: 139 FFAKGMTTIVNATQFNVENEEFQALKEIRVSLPGIGSTNKHGAFVPAYIEIGVIVALLIV 198

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A + ++L+       +  I  N ++   L   +   K  A+ +     G+ G  +     
Sbjct: 199 AILFVFLKWGKTGRGFYAIGGNSQSANMLGINVKRTKFFAYLMCGVLAGIGGFVYFLHVG 258

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             SP     +E   + S +I      GG  ++         L  +  +   +        
Sbjct: 259 SGSPSHASGAEMNAIASSIIGGTMLSGGSGNIIGTLFGVISLSTIKNIVSSLGLDDAWWT 318

Query: 310 LKFDCSFNMRHTTLMVIAL 328
                +       +  + L
Sbjct: 319 NITVAAMICLFLVIQSVVL 337


>gi|170695183|ref|ZP_02886330.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
 gi|170139803|gb|EDT07984.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
          Length = 357

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 93/293 (31%), Gaps = 27/293 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +   +L  L      +     ++  QI   V+ + G++ V+   G + L+     
Sbjct: 57  LAGALLAMIVLFSLLSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAG-IDLSVGSVL 115

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GA    +   ++G        +    +   G + G  ++ +R     ++  ++     
Sbjct: 116 ALGASVVSVAALKWGWGPLPSALLGVAAAALTGTVTGAVTVGWRIPSFIVSLGVLEA--- 172

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                             A  L +  T  R+      F        + +    L    + 
Sbjct: 173 ------------------ARGLAYQMTNSRTAYIGDAFDFLSNPIAVGISPAFLIAVAVM 214

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L RT        I  N++A           K+  FA+  A  G+A  F  +  +
Sbjct: 215 VIAQLVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKVIVFALMGALAGLASLFQISRLE 274

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
              P+     E  ++ ++VI     +GG  S+        I+  +      + 
Sbjct: 275 AADPNAGVGMELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIG 327


>gi|327189508|gb|EGE56663.1| sugar ABC transporter, permease protein [Rhizobium etli CNPAF512]
          Length = 333

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 94/317 (29%), Gaps = 23/317 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K + +L  + VV  ++         +   +  +     I ++ A    + V     + 
Sbjct: 5   IKKRETLLFAIIVVMIVVFSTRAADFATPDNLAGIFNDTAILIILALAQ-MTVILTKSID 63

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A    +  ++ + +     +++ ++A+  GA    +    +        + TL
Sbjct: 64  LSVAANLAFTGMAIAMMNAAFPGLPLVVLILAAVAIGAALGTINGFLVWRLEIPPIVVTL 123

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I++ +                       G  V +      F +      + +  + 
Sbjct: 124 GTLTIYRGMAFVLSG-----------------GAWVNAHQMTPTFLAVPRTPILGLPVLS 166

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                + A + + LR +    +      N  A           K  AF +S A  G++  
Sbjct: 167 WVAIIILALMYMLLRYSQFGRSAYATGGNPTAAVYAGIDTGRTKFLAFVLSGALAGLSSY 226

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
            + +       D+    E   V + V     I GG+ S++        L  +      + 
Sbjct: 227 LWVSRYAVAYVDIANGFELDSVAACVIGGISIAGGVGSVAGTVLGALFLGVIKNALPVIG 286

Query: 303 FYYFNSLLKFDCSFNMR 319
              F  +        + 
Sbjct: 287 ISPFTQMAISGTVIILA 303


>gi|325262439|ref|ZP_08129176.1| ribose transport system permease protein RbsC [Clostridium sp. D5]
 gi|324032271|gb|EGB93549.1| ribose transport system permease protein RbsC [Clostridium sp. D5]
          Length = 381

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 96/302 (31%), Gaps = 18/302 (5%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           ++     +L    ++  ++  +      +   I S           + G++ V+   G +
Sbjct: 65  KIGFNRVVLFCALILMYIIFAILSPTFLNYNRILSALNYAYFLGFLSLGVTFVIA-TGGI 123

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
             +        A     L ++ G+ + + + VS ++  A G++ G     ++      + 
Sbjct: 124 DFSIGPVMFCAALISGHLLTKAGVPLLIALLVSILVGMAFGVLNGYLVAYWKMPSFITSM 183

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
             M                       + R               +  +S  +       +
Sbjct: 184 SSMM---------LAKGIGSVFTKTQSVRWPQAAQENGEFRMLVKMTTSTGMQIPTGLIL 234

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           LL +  + A ++    +T I      I  N++A       +   ++ A+ +  +  G+A 
Sbjct: 235 LLVIAVICAIVL---NKTEIGRHILCIGGNKEAVRLSGVNVRKWEMLAYIICGSMAGIAA 291

Query: 247 AFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
             +  +   + P M     N  +   V     + GG+ S+S       I+  + E    M
Sbjct: 292 IAYVGAYSTVQPGMGDTFNNEAIAGCVMGGTSMTGGIASISGTLIGVMIIALLQEGILAM 351

Query: 302 NF 303
            F
Sbjct: 352 GF 353


>gi|218289074|ref|ZP_03493311.1| Monosaccharide-transporting ATPase [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218240899|gb|EED08077.1| Monosaccharide-transporting ATPase [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 337

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 80/312 (25%), Gaps = 20/312 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + ++  ++  L      S +   S  +     ++ A   + V+   G + L+      
Sbjct: 30  LGILILLVIVFSLAAPGFFSVQNWVSTTVAASNTIILAVAETFVI-LTGGIDLSVGAILG 88

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +          L  V  +++G     +                LI   +   
Sbjct: 89  LSGMVGAEVMQLLLPKGDALSLVLGILAGVFTGAVC--------------GLINGFVVSV 134

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + I     T G  GI           T    +          +      +  L    +  
Sbjct: 135 MDITPFIATLGMLGIATGATYLITNGTDIVNLPQEISKIGDWVIGGVFGFPALVALVVLL 194

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
               +LR+T        +  N +                + +S    G+AG    A    
Sbjct: 195 VAWYFLRKTRFGKYTYAVGSNMEGARRSGINTRAHLFKVYTLSGFLSGLAGMLIVARLAT 254

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            SP      E   + ++VI      GG  S+        I+  ++     M    +   +
Sbjct: 255 GSPLEGANDELNAIAAVVIGGASLFGGRGSVIGSTIGALIISVLISGLVIMGVQPYWQTV 314

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 315 TIGIIIILAVFV 326


>gi|163743290|ref|ZP_02150671.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161383478|gb|EDQ07866.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
          Length = 440

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 95/270 (35%), Gaps = 21/270 (7%)

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
             P   +++     ++G  +L  R DYLAIATL ++EI  ++L     ++ G   +    
Sbjct: 171 AWPAGGLLAAGVAWLIGKTALGLRSDYLAIATLGIAEIIISVLKNEDWLSRGVKNVVGLP 230

Query: 155 RLYFLGTTVRSLIRF---------FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           R       +++   F             +S +  ++    +   +      +     ++ 
Sbjct: 231 RPLPYEVDLQNDAAFVAKAADYGLDPVLASTLYVKLGYSLLFTVVLLALLWMAQMALKSP 290

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS- 264
                R IRDN+ A  ++   +    L  F + SA  G+AGA       +++P  +    
Sbjct: 291 WGRMMRAIRDNEVAAEAMGKDVTRRHLQIFILGSAICGIAGAMMTTLDSQLTPGTYNPLR 350

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
              ++  +VI+GG  +         ++  +      M      +L       N     L+
Sbjct: 351 FTFLIWVMVIVGGSGNNFGAVLGGLLIWFLWIKVEPMGILLIETLTAGMADTNALKVHLL 410

Query: 325 -----------VIALFLVILMRSHSLLRLR 343
                       + L LV+      L+  R
Sbjct: 411 ESASHMRLLTMGLILLLVLRFSPRGLIPER 440



 Score = 38.3 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 39/96 (40%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
            L +  ++       FL  + S      +    L+  + A G+++  G  GL ++  +  
Sbjct: 11  FLFVGVLILLEGSTNFLFFSGSWNSALVILNMGLVSAIMAIGVNLQWGFAGLFNVGIMGF 70

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMI 109
            A+G  + V++ +      W    V  +++ A G +
Sbjct: 71  VALGGLAVVLVSTAPTPGAWSQGGVGIIMALAMGAM 106


>gi|162450494|ref|YP_001612861.1| sugar ABC transport system permease protein [Sorangium cellulosum
           'So ce 56']
 gi|161161076|emb|CAN92381.1| Sugar ABC transport system permease protein [Sorangium cellulosum
           'So ce 56']
          Length = 328

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 83/265 (31%), Gaps = 27/265 (10%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            ++  Q    ++ A GL++V+   G + L+     A+   + VIL         L   +S
Sbjct: 42  INLLNQGSEVMLLAIGLTLVIAVRG-IDLSVGSVMALSGATCVILMKEAHCGPLLAAFLS 100

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             ++G  G+  G          + +            LI    +      I  A+ +   
Sbjct: 101 LAVAGGVGLFNGALVTALNIQPIIVT-----------LISMVGVRGVAMLITRAEPVTHT 149

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
             T                +   + + ++ +  +     L  RRTA+      I DN++A
Sbjct: 150 DATFA---------FIGNGHVGGLPFSMVLVAAVFVVAALLCRRTALGLFMEAIGDNERA 200

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                 +    KL  +  S    G+AG   A+      PD       +  I   ++GG  
Sbjct: 201 SRLAGVSDRRIKLWLYGFSGLCAGIAGLVAASYISTADPDRVGRLRELDAIFAAVIGGTA 260

Query: 280 ------SLSKIAKATAILIGVVELC 298
                  L        ++  +    
Sbjct: 261 LTGGRFYLGGTLIGALLIQTLSTTM 285


>gi|157148177|ref|YP_001455496.1| hypothetical protein CKO_03988 [Citrobacter koseri ATCC BAA-895]
 gi|157085382|gb|ABV15060.1| hypothetical protein CKO_03988 [Citrobacter koseri ATCC BAA-895]
          Length = 342

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 99/310 (31%), Gaps = 15/310 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +   +  +          S++ I ++  ++ IY + A G++ V+ + G + L+     
Sbjct: 29  VLIFMFLLLIFFQTQNSNFLSERNIFNILTEVSIYGIMAVGMTFVILTAG-IDLSVGSIL 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +   +    G +   + P +         +    ++     +L         + +
Sbjct: 88  AVCAMTAAYVIK--GDNFTTVDPSAWGGMSWLIGLGICLAMGTAIGFLHGL-----GVTR 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L  +     G         +   G  +    + +R+     +  I +   +  +  + 
Sbjct: 141 LRLPPFIVTLGGMTIWRGLTLVINDGAPIAGFDQGYRWWGRGELLGISIPIWIFALVAIG 200

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + L   +T        I  N +A       +    +S + V     G+AG   +A   
Sbjct: 201 GYLAL--HKTRWGRFVYAIGGNPEAARLAGVNVKRVLVSVYVVIGCLAGLAGFVLSARLG 258

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                     E  ++ S+VI     +GG   +      + I+  ++     MN   +   
Sbjct: 259 SAEAVAGISFELRVIASVVIGGTSLMGGYGRIGGTVIGSIIMGILINGLVLMNVSAYYQQ 318

Query: 310 LKFDCSFNMR 319
           +       + 
Sbjct: 319 IITGLIIVLA 328


>gi|241663651|ref|YP_002982011.1| inner-membrane translocator [Ralstonia pickettii 12D]
 gi|240865678|gb|ACS63339.1| inner-membrane translocator [Ralstonia pickettii 12D]
          Length = 289

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 96/305 (31%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +  + + GLS+ +G +  ++L        G Y  V+L +R G+     +P+
Sbjct: 8   LFDGLAYGSLLFLISIGLSVTMGLMNFINLAHGAFAMAGGYVCVVLMNRLGVPFLATLPI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++   G ++     +       +  ++ S     + +       G +   V      
Sbjct: 68  AFVVTAIIGFVLECTLYRRLYRASPLDQVLFSIALVFVAMAGATYVWGPSQQPVELPEM- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L   +R   S +    +  +++  +  L+A +   + RT      R   DNQ+
Sbjct: 127 -------LRGQWRVFDSGLEVGRYRLFLIGVVIALTALLAWLIERTRFGAQVRASVDNQQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +       FA+ S                     F     +  + +V +GG 
Sbjct: 180 ASAGLGINVSLVFSVTFALGSGL--AGLGGGLGIDVLGLDPAFPIKYMVYFLLVVAVGGA 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  +L                               ++   + +++++    
Sbjct: 238 GSIKGTLLAALVLGVFDVAGKYY--------------VPDVGAFVIYGLMVVLLVLFPGG 283

Query: 339 LLRLR 343
           LL  R
Sbjct: 284 LLGRR 288


>gi|90421638|ref|YP_530008.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90103652|gb|ABD85689.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 295

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 50/305 (16%), Positives = 102/305 (33%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     LIY + A G  ++  + G+++    +   +G      L +++GL ++L   +
Sbjct: 11  LVNGVGIGLIYGLVAIGFCVIYNASGIVNFAQGVFVMLGGMFAHALLTQFGLPMYLAAAL 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++    G+++ +  +       A    I+       L+  + +            L  
Sbjct: 71  SIVLVAGVGVLVQIFVINPMWRRKAPLFAIILATLAIQLLIEQVV---------ILTLGD 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T              +     +++VL     +  ++  +  RT I  A R    N++
Sbjct: 122 QPRTYPEFTSGGPLKIGPIAIGYQLFWVLGCGAVMVFALTQFFNRTRIGRALRACSQNRE 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +    + AFA+SSA    AG     ++         F  N       I+GG 
Sbjct: 182 AAALLGIPVERMLILAFALSSALGAAAGILITPTQYTAYSVGAPFGING--FIAAIIGGF 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S S       +L  +           F +++                 L +V+L   + 
Sbjct: 240 GSASAGLVGGILLGVIQSGAIVFFGAGFKNVIALT-------------ILLVVLLFFPNG 286

Query: 339 LLRLR 343
           L   R
Sbjct: 287 LFGGR 291


>gi|297184442|gb|ADI20557.1| hypothetical protein [uncultured alpha proteobacterium
           EB080_L84F03]
          Length = 289

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/293 (12%), Positives = 87/293 (29%), Gaps = 22/293 (7%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           Y M A GL+++   + +L+      Y IG +       ++G+   L + +S +     G 
Sbjct: 15  YAMIALGLTLIFALMNVLNFAHGQMYVIGGFVTYTFYGQWGVPFVLALVMSCVTLAILGA 74

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
           ++            +     M             I                   V  ++ 
Sbjct: 75  LIERFLFAPVIKGSSREESTMLLAAGIAFFLDAVI---------LLVFGEKQRGVPKIVD 125

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                   +I       + +       + I  ++ T    A R +  ++ A   +   + 
Sbjct: 126 GVFNWDFRLIMPYDRILICVLAILSIVAFIGLMQYTKTGRALRALAQDRTAAQLMGVNVD 185

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
              +  FA+ +   G+ G                 + +I    +V++GG   +S      
Sbjct: 186 RYSMIGFALGAMLAGLVGGLLVTITGV--NLGMGGATSIKAFMMVMIGGAGVISGAIWGG 243

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            IL  +  +            L     +      L+ ++L + + +R   L+ 
Sbjct: 244 IILGFMEAI-----------GLALLYQYGDITYLLIFVSLMIFLAIRPQGLMG 285


>gi|284162938|ref|YP_003401561.1| inner-membrane translocator [Archaeoglobus profundus DSM 5631]
 gi|284012935|gb|ADB58888.1| inner-membrane translocator [Archaeoglobus profundus DSM 5631]
          Length = 285

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 100/303 (33%), Gaps = 29/303 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +  L+Y + A GL+++ G + +++L+     A+G +    L +   L+ +L +P 
Sbjct: 9   LISGILLGLVYGLAAIGLNLIFGVMRVINLSHGAFIALGMFVAYYLFTYG-LNPYLGVPA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +    GM+    +L    D   ++TL+ +      +I                   +
Sbjct: 68  IFGLGLFLGMVTYFVALHRVIDAPELSTLLSTFSVSLFIIGVGTF-------------VW 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I         V          +    L+A + ++L RT +  A R +  N+ 
Sbjct: 115 TTIPYAIDIDLGYVAIGNVTILGTKVATGVISVILTALLYIFLYRTKLGKAVRAVSMNRT 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +          +F +  A    AGA  A         +      +    I +LGG+
Sbjct: 175 AAELMGINTTKILALSFGIGVALAMTAGALIATIFPF--TILSGGVYELKSFVICVLGGL 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +         +L  +  +            ++F               L  V++++   
Sbjct: 233 GNPLGALVGGLVLGIIENVATMQITTGLVPFIEF-------------AILVAVLVLKPRG 279

Query: 339 LLR 341
           LL 
Sbjct: 280 LLG 282


>gi|222109679|ref|YP_002551943.1| inner-membrane translocator [Acidovorax ebreus TPSY]
 gi|221729123|gb|ACM31943.1| inner-membrane translocator [Acidovorax ebreus TPSY]
          Length = 309

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/310 (10%), Positives = 92/310 (29%), Gaps = 18/310 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS-----IW 93
           +    +  ++Y + A G  ++  + G+ +          A +                  
Sbjct: 8   LIGGLMAGMLYALVALGFVLIFKASGVFNFAQGAMVLFAALAMARFAEWIPEWTGISNPI 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           +    + +I+G C   +     +    +L         +    +  +             
Sbjct: 68  VANLAAFLIAGLCMFAVAWFIERLVLRHLVNQEGATLLMATLGITYFLEGLGQTFFGSDI 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            ++          +    F    ++ +  +    +        + ++ ++T    A R +
Sbjct: 128 YKIDIGMPKDPVFLLDTVFEGGVLVNKEDVIAAGIAAAL-VVVLSIFFQKTKTGRALRAV 186

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            D+ +A  S+   +    +  + V+     +AG  + +            +  +  + +V
Sbjct: 187 ADDHQAAQSIGIPLNHIWVIVWCVAGVVALVAGMIWGSKL---GVQFSLTTVALRALPVV 243

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ILGG+TS+        I+    +L       +    ++   +          +   + +L
Sbjct: 244 ILGGLTSVPGAIIGGLIIGVGEKLSEVYLGPFVGGGIEIWFA---------YVLALVFLL 294

Query: 334 MRSHSLLRLR 343
            R   L   +
Sbjct: 295 FRPQGLFGEK 304


>gi|254562544|ref|YP_003069639.1| branched chain amino acid ABC transporter permease
           [Methylobacterium extorquens DM4]
 gi|254269822|emb|CAX25800.1| putative ABC transporter, permease precursor; putative
           branched-chain amino acid transporter [Methylobacterium
           extorquens DM4]
          Length = 291

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/308 (12%), Positives = 83/308 (26%), Gaps = 26/308 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y  S      IY + A G  I+  +   ++        IGA   V+            +
Sbjct: 6   QYTLSGLAIGGIYALVALGFHIMWSAAKAVNFAHGDTLMIGAVLAVMGIDAGLPLPLACL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                 +    ++       F G   +I  ++ +     +      +  G          
Sbjct: 66  LAILAGALFGVVLERFAVRPFIGSNASIGWMLTTIAVGIMAESLATMQFGG--------- 116

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + S                    +        A +    R T +  A + +  N
Sbjct: 117 --FSRPLPSPGVAGAISILGAGVYPQELVIPAVALLAMAGLYAMQRHTLVGRAMQAVAHN 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++A   +   +    + +F +++ F   AG   A                +   ++ I+G
Sbjct: 175 RQAAALMGINVDRIVMFSFGLAALFGAGAGVLVAPVIQA--SASMGVLLGLKGFAVAIIG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+TS   +  A      + +   G                      +   A+ LV++   
Sbjct: 233 GITSGPGVVLAGLAFGVMEKFVEGYVS-------------TAAREIVGFSAIILVLVAFP 279

Query: 337 HSLLRLRT 344
             L   R 
Sbjct: 280 QGLFGRRE 287


>gi|297566834|ref|YP_003685806.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
 gi|296851283|gb|ADH64298.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
          Length = 304

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/311 (13%), Positives = 94/311 (30%), Gaps = 15/311 (4%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
            + + + +      +Y + A G  +V  + G+ +        IGAY    L     + + 
Sbjct: 5   LTLQTLVNGLANGALYAVIAAGFVLVYRATGVTNFAISEFLLIGAYLTYTLSLFLPVLLA 64

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           +L+ + A       +  G               + +      +            G    
Sbjct: 65  MLLALPAAFVFGVLVERGFVRPLL-----GRNVVAVIMATIGLAATLDGAALIVWGPDQK 119

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                    +   +    F    V       + L+    ++  +I  L+ T      R +
Sbjct: 120 AMGAADIAQLPKELPNLAFNVGGVFLSSKAVWSLILALPIAIFLIAMLKYTRYGILLRAV 179

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            +++ A  +L          A+ +S+    + GAF A +     P        ++V  + 
Sbjct: 180 SESETAALALGINAPGVVAIAWGISAMMATIGGAFLAGAAGGGGPGHHLILLGLVVFPVA 239

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ILGG  S++    A  ++  V              +             +  + + LV++
Sbjct: 240 ILGGFDSVAGAVVAGLLIGLVEAFSQLYLEALLPGI----------SQAIPFVIVLLVLM 289

Query: 334 MRSHSLLRLRT 344
           +R + L     
Sbjct: 290 LRPYGLFGQHR 300


>gi|89902305|ref|YP_524776.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89347042|gb|ABD71245.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 309

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 101/309 (32%), Gaps = 16/309 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A +             +   +
Sbjct: 8   LLGGLMAGMLYSLVALGFVLIYKASGVFNFAQGAMVLFAALAMARFSEWIPGWTGIDNRI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATL----IMSEIFQNILIKWKPITNGKAGIYVAD 154
           +  ++      M +  + +  + LA+  L      + +   + I +     G+       
Sbjct: 68  AVNLAAFLLAGMVMFVVAWLIERLALRHLVNQEGTTLLMATLGIGYFLDGIGQTLFGSNI 127

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
               +G     ++ F       ++      Y  L    L A + L+ ++T+   A R + 
Sbjct: 128 YEINIGMPKDPMLAFESVFEGGILINKEDLYAALIAAVLVAMLSLFFQKTSTGRALRAVA 187

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           D+ +A  S+   +       + V+     +AG  + +            +  +  + +VI
Sbjct: 188 DDHQAAQSIGIPLNRIWFIVWCVAGVVALVAGVIWGSKL---GVQFSLTTVALRALPVVI 244

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           LGG+TS+        I+    ++       Y    ++   +          +   + +L 
Sbjct: 245 LGGLTSVPGAIIGGLIIGVGEKMSEVFVGPYVGGGIEIWFA---------YVLALVFLLF 295

Query: 335 RSHSLLRLR 343
           R   L   +
Sbjct: 296 RPQGLFGEK 304


>gi|293390842|ref|ZP_06635176.1| monosaccharide-transporting ATPase [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951376|gb|EFE01495.1| monosaccharide-transporting ATPase [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 342

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/325 (11%), Positives = 99/325 (30%), Gaps = 8/325 (2%)

Query: 3   IFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
           +FSL+       + L+     L +     A  S   I ++ +Q+ +  + + G++ V+  
Sbjct: 1   MFSLKKIISKLGIGLVLFFMILGMSFTSEAFLSTNNIFNILLQVSVICVISVGMTYVI-L 59

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G + L+     A+ A    +   R    +        +       ++G   +     Y+
Sbjct: 60  TGGIDLSVGSIVALSAVCLGLFTHRGVAILGENPTEPMLSIVVMVSVLGSIGVGALCGYV 119

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
               ++  ++     I    +     G+ +              +RFF      +     
Sbjct: 120 NGVIIVYGKVTS--FITTLGMMGIARGLALTLSNGKTIYNFPEALRFFGNGRLNITDGFG 177

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +   ++    +       L +T        +  N++A       +   ++  + ++ A  
Sbjct: 178 IPIPVIIALIVVLISFYILTQTVFGRQVYALGGNREAVRLSGINVNKLEIKTYVINGALA 237

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVEL 297
            +         +   P      E   + + VI     +GG+ S+   +    I+  +   
Sbjct: 238 AIGAMILVGRLNAAQPIAGTGYELDAIAATVIGGTSLMGGVGSVISTSIGALIMGVLQNG 297

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTT 322
              +N   +   L       +    
Sbjct: 298 LTLLNVTSYLQRLIIGLVIILAVFL 322


>gi|323528411|ref|YP_004230563.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
 gi|323385413|gb|ADX57503.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
          Length = 328

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 49/323 (15%), Positives = 104/323 (32%), Gaps = 26/323 (8%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGA-TKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
           FS RL    +   L+A+V     F+       S + +  +  Q ++  + A G +++V  
Sbjct: 14  FSDRLPSLAEAGPLVALVLACAFFISQSNRFLSFQNLSLILQQTMVVAVIAIGQTLIV-L 72

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G + L+C +  A G+          GL   + I      S   G++ G+   + +    
Sbjct: 73  TGGIDLSCGMVMAFGSIIMTKFAVTLGLPPVVAILCGIGASTLFGVLNGVLITRIKLPAF 132

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
            +    ++  F    I                      +          F ++F +    
Sbjct: 133 IVTLGTLNIAFALTQIY-----------------SNAESVSNLPDAIMFFGNTFKLGPAD 175

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           + Y  +    +  +    LR T        + +N +A   +  +     L+ + ++ A  
Sbjct: 176 VTYGTVLTLLMYLATWFVLRDTVPGRHLYALGNNAEAARLMGLSSQKILLTVYTLAGAIY 235

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVE 296
           G+A     +    +       +EN+  I+ V+L      GG  S+S       I+     
Sbjct: 236 GIAALLSVSRTG-VGDPQAGQTENLDSITAVVLGGTSLFGGRGSISGTLLGALIVGVFRN 294

Query: 297 LCCGMNFYYFNSLLKFDCSFNMR 319
               +       +L       + 
Sbjct: 295 GLTLIGVSSVYQVLITGMLVILA 317


>gi|190893259|ref|YP_001979801.1| branched-chain amino acid ABC transporter permease [Rhizobium etli
           CIAT 652]
 gi|190698538|gb|ACE92623.1| probable branched-chain amino acid ABC transporter, permease
           protein [Rhizobium etli CIAT 652]
          Length = 300

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y         GL   + +  +
Sbjct: 22  VDALAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMIGGYIASYAAHDLGLGYAVAVVAA 81

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + +    + +     +       +  ++M+      +I       G            L
Sbjct: 82  VVATIIIAIPLERFLYRQIYGAPELTQVLMTIGITFCVIGIANYAMGP----------TL 131

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T   +          F    +   +V+L    ++ S+   + RT+     R   D+   
Sbjct: 132 KTIPLAAALQGSADLGFRTIPVHRLFVILCGLVVAVSLWFAIDRTSFGVKLRASVDDAAM 191

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FAV+       G   A          +     +  + +V +GG  
Sbjct: 192 AAALGVRTEIIYAVSFAVAVGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGAG 249

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L  +      +   +                    +A+  +I +    L
Sbjct: 250 SIPGALIACLLLGAIDTTGRYLMPEFGE--------------FFFYLAVIAIICIFPRGL 295

Query: 340 LRL 342
              
Sbjct: 296 AGR 298


>gi|153010237|ref|YP_001371451.1| monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC
           49188]
 gi|151562125|gb|ABS15622.1| Monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC
           49188]
          Length = 346

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/313 (10%), Positives = 85/313 (27%), Gaps = 10/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +    +         S      M   + I+ + A G+ ++V   G + L+     
Sbjct: 31  AFFALIAIIAVFSFLSPYYFSVDNFLIMSSHVAIFGLLAIGM-LLVILNGGIDLSVGSTL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       L     L  + +I    + +           +      +    +    +  
Sbjct: 90  GLAGVVAGFLMQGVTLQEFGIILYFPVWAVVLITCALGAFVG----AVNGVLIAYLRVPA 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +             + + + L +     R  +    F          +   +L +  L+
Sbjct: 146 FVATLGVLYCARGVALLMTNGLTYNNLGGRPELGNTGFDWLGFNKLFGVPIGVLVLAVLA 205

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L RTA          N++A       +   K+S + +S     +AG   ++   
Sbjct: 206 IICAIVLNRTAFGRWLYASGGNERAAELSGVPVKRVKVSVYVISGICAAIAGLVLSSQLT 265

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG  ++        ++  + +    +    +   
Sbjct: 266 SAGPTAGTTYELTAIAAVVIGGAALTGGRGTIQGTLLGAFVIGFLSDGLVIIGVSSYWQT 325

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 326 VFTGAVIVLAVLL 338


>gi|111021741|ref|YP_704713.1| ABC branched-chain amino acid transporter, permease component
           [Rhodococcus jostii RHA1]
 gi|110821271|gb|ABG96555.1| ABC branched-chain amino acid transporter, permease component
           [Rhodococcus jostii RHA1]
          Length = 318

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 88/307 (28%), Gaps = 28/307 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y +   GL I+  S  +++        +  Y  +            L+  
Sbjct: 37  LTTGIANGAVYGLIGLGLVIIFRSTDVMNFAMASLSTLAIYVALSAYGAGVGIAVALVVA 96

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               + +  ++            L  A L+++     I+        G+        +  
Sbjct: 97  VVFGALSGVVVREALIRPLGQGKLFAA-LVVTMGLSIIVEHLIGHYWGEQPRRFPQLVEG 155

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +   S +      +            +L      ++I     RT + +A R + ++ +
Sbjct: 156 TISIGNSNLMLQDIAT------------ILLAAVAVSAIAYLFTRTPVGSAMRAVAESAE 203

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L          A+A+  A   +    +A         +          + ++LGG+
Sbjct: 204 TAEILGINAHKVARIAWALGMALAVLGVFLYAPKTGV--SPVILAPVLFRAFAGILLGGL 261

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+  +  L        F               T +     LV+L+R   
Sbjct: 262 TSMYGAVIGGLIIGVLDNLAAAYISASF-------------RDTFVFCVAVLVLLIRPQG 308

Query: 339 LLRLRTP 345
           +   +T 
Sbjct: 309 IFGRQTF 315


>gi|84685738|ref|ZP_01013635.1| hypothetical protein 1099457000253_RB2654_07194 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666404|gb|EAQ12877.1| hypothetical protein RB2654_07194 [Rhodobacterales bacterium
           HTCC2654]
          Length = 290

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/311 (15%), Positives = 101/311 (32%), Gaps = 26/311 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
            +     +       L+  M + GL++ +G +  ++L       IG Y+     +  GL 
Sbjct: 2   FSLIASILIDGIAYGLVLFMVSVGLTVTLGLMRFVNLAHGTFAMIGGYAAATAITALGLP 61

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L +  +A+ +GA    + +  ++       +  ++++     + I    +  G + + 
Sbjct: 62  YGLALICAALAAGAIAYGLEIALIRRLYHRPELDQVLLTIGLVFMGIALSGMMFGNSLVP 121

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           V    +  G T     +        ++  +               I L   RT      R
Sbjct: 122 VRLPEFLRGATDLGFRQVPTQRFVPLVLGLATL----------IGIWLLFERTRFGIRLR 171

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
              DN +A   L         +AFA+ +A  G+ G   A          +     ++ ++
Sbjct: 172 ATVDNPRAAGELGINTRHIYAAAFAIGAALAGLGGVAGAELLPV--EPYYPLKYLVLFLA 229

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +V +GG  ++     A  +L  V      +                   T  +   + LV
Sbjct: 230 VVAVGGPGNMLGSFVAALLLGTVETAGKYLA--------------PDFATIALYALMLLV 275

Query: 332 ILMRSHSLLRL 342
           +  R   L R 
Sbjct: 276 LSWRPEGLFRR 286


>gi|327398221|ref|YP_004339090.1| ABC transporter integral membrane subunit [Hippea maritima DSM
           10411]
 gi|327180850|gb|AEA33031.1| ABC-type transporter, integral membrane subunit [Hippea maritima
           DSM 10411]
          Length = 299

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 101/305 (33%), Gaps = 18/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G L L++       A+ AY  +++  +   ++  ++ +
Sbjct: 8   LVNGLTIGSIYALVALGYTMVYGVLKLINFAHGDLVALSAYIGLVIMMQLAGALSPVLLI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                    +I     +  R  Y  +          + L     I NG   I+       
Sbjct: 68  ITTFIATMIIIATAGVILERTAYRPLRKAPRLSAVVSALGASLVIENGIMLIWGPMP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S +    +    V   +    VL+    L  ++  ++ RT +  A R    +Q 
Sbjct: 125 -RIFPASAVPNANYNIGNVYISLMQVLVLIISFVLMVALYFFVNRTKLGTAMRACAIDQD 183

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    ++ F + SA   + G F       I  +M  +   +      I+GG+
Sbjct: 184 AARLMGIDVNRVIVTTFVIGSALGAVGGLFIGMYYRGIHFNM-GWIYGLNAFVAAIIGGI 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L        G     +                L  + L +++++R   
Sbjct: 243 GNIPGAMLGGILLGIFNAFISGYLSSSWA-------------LALTYVLLIVIMIIRPTG 289

Query: 339 LLRLR 343
           +L  R
Sbjct: 290 ILGER 294


>gi|320007525|gb|ADW02375.1| inner-membrane translocator [Streptomyces flavogriseus ATCC 33331]
          Length = 296

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 87/309 (28%), Gaps = 21/309 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G  ++  +  +++         G Y   +      +  W  + V
Sbjct: 8   LLGGLSIGSVYALIALGFVVIFKATEVVNFAHASLLLAGGYVTAV--LHDDIGFWPALGV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +   G  +    ++           I++     +L        G   + + D    
Sbjct: 66  GIAGAAVVGSAVEFLVMRRYRGSDQSVLAIVTIGVDILLTTELVRRMGTDVMALGDPWGD 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              TV  +       ++F++  + +   LL             R T+   + R   +N +
Sbjct: 126 DVVTVGGVTLAETRIAAFLVAGLLITVFLLAF-----------RFTSWGVSMRAAAENPQ 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    LSA+AV+ A   +A  F          +       +      ILGG+
Sbjct: 175 TAALMGIRLGRVSLSAWAVAGALAAVAALFLTV-FPTPGLERATSLAALKAFPAAILGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +       ++     L  G                      ++++        R   
Sbjct: 234 DSTTGALVGGLVVGVTESLATGYQSDLSFLGRGIGDLAPYLVMVVVLLV-------RPAG 286

Query: 339 LLRLRTPSN 347
           L   +  S 
Sbjct: 287 LFGTKELSR 295


>gi|154508208|ref|ZP_02043850.1| hypothetical protein ACTODO_00702 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797842|gb|EDN80262.1| hypothetical protein ACTODO_00702 [Actinomyces odontolyticus ATCC
           17982]
          Length = 356

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 100/313 (31%), Gaps = 15/313 (4%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
            + I+  + V+  +++     A  +   + S+    ++ +++A G+ ++V   G + ++ 
Sbjct: 19  REGIVLSVLVLLTIIMSAISPAFFTVSTLFSLLRSSIVPMIYALGV-LLVIISGGIDVSF 77

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               +  +Y+ ++     G++I L+    +         +      +      + TLI++
Sbjct: 78  AAIASFASYATIVFQLSRGINIGLV---GSFAMALAIGALLGLLNGYLISRFKLPTLIVT 134

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
              Q I   +     G   I            + S                 ++ +++  
Sbjct: 135 LGTQGIFQGFLLAYIGSKYIAQLP------EGMASASTANLVSVETSTGVALLHSMIIPA 188

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L+  I L L RT    A   I  + ++       +   ++  + ++      AG  + 
Sbjct: 189 IILAIVIALVLSRTMFGRAIYAIGGDTESAHRAGINVKRTQIWVYVIAGTLAATAGMVYM 248

Query: 251 ASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
                 +P      E  I+ ++V     I GG  S+        ++  +      +    
Sbjct: 249 ILGRSANPQELVGHELDIIAAVVLGGASIFGGRGSVRGTILGVLLVQLINNSLILIGVPS 308

Query: 306 FNSLLKFDCSFNM 318
                        
Sbjct: 309 AWQRAAVGLLLVA 321


>gi|116249154|ref|YP_764995.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253804|emb|CAK12199.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 302

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/270 (12%), Positives = 85/270 (31%), Gaps = 9/270 (3%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             +    +    Y + A GLS +   + +++L         AY   +L ++ G+  +  +
Sbjct: 3   NTLLQGILLGGYYAVIACGLSFMFSVMRIINLAHGSLAVAAAYGLWLLAAKAGIPPFAGL 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +   +  A G ++    L+       +  ++ +     ++        G     +A   
Sbjct: 63  LIVLPVMAAVGWLLQRFILERSARGGTLLPILTTFGLSIVIDNLLFEQFGADTRSLAP-- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + +L          +        +++    +   +  +L R A+  A R   ++
Sbjct: 121 -----FIGNLSYASWQLPGHIYVGKLAVMMMVTAVLILGGLQFFLSRFALGRAIRATAED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 +          A A++   +G+AGAF                + +      ++G
Sbjct: 176 PDTAGLVGIDARRVNAVATAITMVTVGIAGAFLGMRATF--SAYSGGPQLLFAFEAAVIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           G  SL        +L     L   ++   F
Sbjct: 234 GAGSLWGTLAGGIVLGLAQSLGAQLHPQGF 263


>gi|315646236|ref|ZP_07899356.1| inner-membrane translocator [Paenibacillus vortex V453]
 gi|315278435|gb|EFU41751.1| inner-membrane translocator [Paenibacillus vortex V453]
          Length = 322

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 97/300 (32%), Gaps = 25/300 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +   +      I ++  Q+ I  + A+G++ V+   G + L+     A+ +     +   
Sbjct: 37  VLNPSFLEPLNILNLLRQVSINALIAFGMTFVI-LTGGIDLSVGSILALSSAFVANMMLA 95

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                 L I +   + G  GMI GL   K +      ATL    IF+ + +         
Sbjct: 96  GFD-PILAIIIGVALGGVMGMINGLMITKGKMAPFI-ATLATMTIFRGLTL--------- 144

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                   +Y  G  +  L     F      Y   +    + M    A + + L +T+  
Sbjct: 145 --------VYTNGNPITGLGDSLAFQLFGRGYLFGIPVPAITMIITFAVLWVILHKTSFG 196

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                I  N+KA       +   K+  ++++     +AGA   +  +   P      E  
Sbjct: 197 RKTYAIGGNEKASLVSGIKVPRVKIMIYSLAGMLSALAGAILTSRLNSAQPTAGTSYELD 256

Query: 268 IVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V     + GG   +        I+  +      +    F  ++       +    
Sbjct: 257 AIAAVVLGGTSLTGGRGRIVGTLIGVLIIGILNNGLNLLGVNSFYQMVVKGVVIAIAVLL 316


>gi|257468742|ref|ZP_05632836.1| monosaccharide-transporting ATPase [Fusobacterium ulcerans ATCC
           49185]
 gi|317062996|ref|ZP_07927481.1| monosaccharide-transporting ATPase [Fusobacterium ulcerans ATCC
           49185]
 gi|313688672|gb|EFS25507.1| monosaccharide-transporting ATPase [Fusobacterium ulcerans ATCC
           49185]
          Length = 320

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/314 (12%), Positives = 98/314 (31%), Gaps = 25/314 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +V  ++  +   +  S   + ++ +Q  I  + A G+++++   G + L+     
Sbjct: 19  FVFSFLVLVVIATVINHSFLSWTNLSTLMLQSSIKGIIALGMTLII-ISGQIDLSVGSQC 77

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    ++      S ++++          G I GL + K +     +    MS    
Sbjct: 78  ALVA-GLGVVVLNRTESPFIMLLFCMAFGALLGTINGLITNKGKIAPFIVTLATMSAY-- 134

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                            +  +L   G     +     F        + +  + +    ++
Sbjct: 135 ---------------RSIIVQLGQGGPFNIKMKILMSFRKIAAGKFLGVPNLAIIFVIIT 179

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +++ ++ T        +  N+ A F     ++  K   F ++    G+A    ++   
Sbjct: 180 ILMVILVKYTKFGRYVYAVGSNENATFLTGVNVVKVKTLCFTLTGFLTGIASFLLSSRLT 239

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            I+      S  +  I+ V +      GG   +        +L  +  +        F S
Sbjct: 240 SITAANVGMSFELDAIAAVAIGGTSMSGGRGKIMGTFLGAIMLQMIEGILIAARIPPFLS 299

Query: 309 LLKFDCSFNMRHTT 322
            L       +    
Sbjct: 300 GLVKGIIIILAVIF 313


>gi|254691576|ref|ZP_05154830.1| high-affinity branched-chain amino acid transport system permease
           protein LIVM / high-affinity branched-chain amino acid
           [Brucella abortus bv. 6 str. 870]
 gi|256256762|ref|ZP_05462298.1| high-affinity branched-chain amino acid transport system permease
           protein LIVM / high-affinity branched-chain amino acid
           [Brucella abortus bv. 9 str. C68]
          Length = 483

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 57/137 (41%)

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            +  +L    + A ++ ++  + +  +W  +R +++A  +   +I  AKLSAFA+S+   
Sbjct: 68  YFLFVLLAYGIIAVVLEFISHSRLGASWLAVRHSERAAAANGISIPRAKLSAFAISAFIS 127

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G++G   A     +  + F   +++ + ++  + G            +++   EL   +N
Sbjct: 128 GISGGLLAGYLGTLVAENFSMMQSLALFAVATMAGAHFTLGALIGGVLIVLFPELLRRLN 187

Query: 303 FYYFNSLLKFDCSFNMR 319
                  + F       
Sbjct: 188 LPQDIGNVFFALGAVQA 204


>gi|154483815|ref|ZP_02026263.1| hypothetical protein EUBVEN_01519 [Eubacterium ventriosum ATCC
           27560]
 gi|149735306|gb|EDM51192.1| hypothetical protein EUBVEN_01519 [Eubacterium ventriosum ATCC
           27560]
          Length = 325

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/321 (12%), Positives = 97/321 (30%), Gaps = 25/321 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K + ++ L  +V  ++  +      +     ++  Q+++  + A G+   +   G + L+
Sbjct: 9   KREFVVLLATLVMAVVFTVLNSNFLNYNNFVTILQQMVLNGVLAVGMMFTI-ITGGIDLS 67

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
               YAI           YG++ +L I V  ++    G   G    K +           
Sbjct: 68  VGCTYAITGIIVASCTVNYGMNPFLGILVGLVVGAVLGAFNGFLINKMK----------- 116

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                  L  +       +       +   G  V ++   +R   +  +     YY+++ 
Sbjct: 117 -------LQPFIATLGTMSLYRGLAYVVTGGVPVTNVPDSYRNIFNGELVGGIRYYIIVM 169

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +     + IL   +    +    +  N++A       ++  K  A+        +AG   
Sbjct: 170 VVVFVVAHILLS-KMRSGDYLYAVGGNEEAAKLSGVNVVKTKYIAYIFCGVCSAIAGMIM 228

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            AS            E   + +       + GG  +         +L  +      +N  
Sbjct: 229 LASLGSAEATAGSGYETNAIAAAAIGGTRMAGGKGTALGTFIGALMLAVLKVGMVVINVD 288

Query: 305 YFNSLLKFDCSFNMRHTTLMV 325
            F   +       +      +
Sbjct: 289 SFWQFVVTGIIIIVASYFEFI 309


>gi|15966296|ref|NP_386649.1| putative permease protein [Sinorhizobium meliloti 1021]
 gi|307307765|ref|ZP_07587494.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
 gi|307317426|ref|ZP_07596866.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|15075567|emb|CAC47122.1| Ribose transport system permease [Sinorhizobium meliloti 1021]
 gi|306897015|gb|EFN27761.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|306901631|gb|EFN32233.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
          Length = 349

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 87/312 (27%), Gaps = 11/312 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+    L        +   + ++  Q     + A G + V+   G + L+     A
Sbjct: 33  LIALVLLMAYLAFATSNFLTLDNLSNVARQSAFVAILAVGQTFVI-LTGGIDLSVAAIAA 91

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + A    +L ++    +   I    +      +I  L  +        + +      F  
Sbjct: 92  LSASITAVLLTQPL--VLFGIDFGFVPPPVAILIGILIGMAAGALNGWLISKFKIPDFIA 149

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L            +     +       +            +        + L       
Sbjct: 150 TLGTMTAFRGAALLVTDGLPVPSFNAGRQLPESLIWVGGGQLFGVPVSALIALLCAAAGW 209

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++   R TA+  A   +  N+ A  S   +I   K+  +A+S     +AG       + 
Sbjct: 210 YVL---RYTALGRAIYAVGGNRAAAHSSGISISRTKIMTYAISGLLAAIAGIILVGRLNS 266

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            +  M    E   + S+VI      GG   +       AI+  +      ++   F   +
Sbjct: 267 ANALMADGEELRSIASVVIGGTNLFGGEGGVWGSIIGAAIIGVLGNGLNLLDVSPFWQRI 326

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 327 AQGVVIVVVVIF 338


>gi|217968023|ref|YP_002353529.1| sugar ABC transporter ATPase [Dictyoglomus turgidum DSM 6724]
 gi|217337122|gb|ACK42915.1| Monosaccharide-transporting ATPase [Dictyoglomus turgidum DSM 6724]
          Length = 317

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/322 (9%), Positives = 88/322 (27%), Gaps = 27/322 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LR    +  + L   V  + + +      +   +  +  QI IY + A G ++++   G 
Sbjct: 10  LRFYFRELNILLALAVLCVFITIMNPKFITPFNLQVVARQIAIYGLLAIGETLII-IGGG 68

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+      +        +  ++ V  +            +      ++   
Sbjct: 69  IDLSVGSLVALTGVLVALFMKNGIDMVVAILLVLIISCLIGFWHGFFVTKLNVPPFIITL 128

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
             + +      +I          G  +           +  +    FP+           
Sbjct: 129 GTLTAARGLASVI--------TKGWPIIGLPEKFFFIGQGDLWGIPFPT----------- 169

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
             + +   +       + T +      +  N +A       +   ++  +   S   G+ 
Sbjct: 170 --VILIVFAILAFFITKYTVLGRDLYAVGGNIEAARLSGIDVDKVRMFTYVFGSFLAGIT 227

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G   A+   +    +    E   + + VI      GG  ++       +I+  +      
Sbjct: 228 GIIIASRLSQGQAGVGGGYELSAIAAAVIGGTSLSGGEGTILGTIIGASIMSVIYNGLIL 287

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +    +   +          T 
Sbjct: 288 LEISSYWHDVVMGLVIVTAVTI 309


>gi|157364791|ref|YP_001471558.1| inner-membrane translocator [Thermotoga lettingae TMO]
 gi|157315395|gb|ABV34494.1| inner-membrane translocator [Thermotoga lettingae TMO]
          Length = 292

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 89/304 (29%), Gaps = 22/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      ++ + A G ++V G + L++      + +  +      + + +  WL    
Sbjct: 10  LANGIALGFVFGLVAIGYTLVYGVVKLVNFAHGDIFMMATFFVYYSITLFSIPWWLSFVF 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  ++   G+ +   + K       I++L  +     +L  +  +  G            
Sbjct: 70  AIFLTILLGISVEKIAYKPLRSAPRISSLCSAIGMSFLLENFATVVFGGRQKPFYQP--- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +         V  +      ++        +   + RT +  A R +  +  
Sbjct: 127 -------NVLNRTIEIYNVRIQFVTIITIVVSIVALLFLNYLVYRTKMGLAMRALAHDFD 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       FAV SA   ++  F+A    +I P             + +  G 
Sbjct: 180 TAKLMGINVDRTITFTFAVGSALAAISAIFWALRYPQIWP------------FMGVFPGW 227

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            + +         I        +       L+ F           + I L LV+L +   
Sbjct: 228 RAFTAAIIGGIGSIKGAMTGGFLIGMISILLVAFLPDLAGYRDAFIFIMLVLVLLFKPKG 287

Query: 339 LLRL 342
           L   
Sbjct: 288 LFGE 291


>gi|134093665|ref|YP_001098740.1| branched chain amino acid ABC transporter permease [Herminiimonas
           arsenicoxydans]
 gi|133737568|emb|CAL60611.1| putative Branched-chain amino acid ABC transporter permease protein
           [Herminiimonas arsenicoxydans]
          Length = 293

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 95/306 (31%), Gaps = 21/306 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +   Q  +  + A GL ++ G   +++L C   YA+GAY  + + S        +   
Sbjct: 8   LLAGVFQAAVLFLVASGLQLIFGVQRIINLACGSIYALGAYFGIFVTSWALSKGLPVHLF 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ GA  +I  +     R            ++     +        +       +   
Sbjct: 68  PFVLLGAGIVIGLIGIPLERLIRTIYNRPESFQLLLTFAVMLMFQDVLRFFWGADPQQLP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +    ++  F      V    +   V+     L+  +  +L +T      R   +N++
Sbjct: 128 NVSMTFGILSAFG-----VSMPTYNVMVIAVAVSLAIGMAYFLGKTKTGKILRATAENRE 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              ++   +    +  F + +    + GA      +  +         +   ++V++GG+
Sbjct: 183 TSAAMGINVTRVYVMVFTLGTMLGTIGGALVIP--NAAASLEMGVELVVEAFAVVVIGGL 240

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A    I+  +  L                  +       +   +  V++ +   
Sbjct: 241 GSMKGAAVGALIVGLIRALSAMY--------------YPEAEILAIYAIVLAVLIWKPAG 286

Query: 339 LLRLRT 344
           L     
Sbjct: 287 LYGKAE 292


>gi|126459440|ref|YP_001055718.1| inner-membrane translocator [Pyrobaculum calidifontis JCM 11548]
 gi|126249161|gb|ABO08252.1| inner-membrane translocator [Pyrobaculum calidifontis JCM 11548]
          Length = 318

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/323 (13%), Positives = 92/323 (28%), Gaps = 11/323 (3%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           V      +  L A    +      +   I  + A GL++   +  + +        +G  
Sbjct: 5   VALVFAAWAGLSAFFWPREAADAVLYSSILALAALGLTLAYQTTKVPNFAHGALINVGVV 64

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           S + +   +G   +  + +   ++    + + L  L                    +   
Sbjct: 65  SALTVAQAFGKPTYYALLIGVPLAVVSALALYLVLLPL-------YKRGTQAEVMMMATM 117

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              I         AD            I    +  +        Y +      L A ++ 
Sbjct: 118 AFNIIYIGLLNAYADWAGRSMGIFMRGITLRPYDVTIASVP-GAYIIAPATTALFALLLY 176

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
              +T +  A R   +N+    +L   +  A   A+A++    G+AG +     +     
Sbjct: 177 LFLKTKVGTALRAAVENEDLARTLGINVERAYAIAWAIAGTAAGVAGVYLPLYIEA--TP 234

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD-CSFNM 318
              +       +  I GG+ S+        ++  V  L         N            
Sbjct: 235 DVGWLMLASFFAASIAGGLGSIYGALAGGFLMGFVETLATLQFATLLNWAFGIPQYQITA 294

Query: 319 RHTTLMVIALFLVILMRSHSLLR 341
               + ++A+  V+L+    LL 
Sbjct: 295 YRPLVPLLAIATVLLISPRGLLG 317


>gi|76802700|ref|YP_330795.1| branched-chain/neutral amino acids ABC transporter permease I
           [Natronomonas pharaonis DSM 2160]
 gi|76558565|emb|CAI50157.1| ABC-type transport system permease protein (probable substrates
           branched-chain/neutral amino acids) I 1 [Natronomonas
           pharaonis DSM 2160]
          Length = 373

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/326 (10%), Positives = 85/326 (26%), Gaps = 39/326 (11%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  +I  +   GLS+    L   + +      +GA+S   +         +    
Sbjct: 57  LTQGIVIGVIIGLAGIGLSMTYSILNFANFSHGDLITVGAFSGWGVAYLILGWGIVATDP 116

Query: 99  SAMIS----------------GACGMIMGLPSLKFRGDYLAIATLIM--------SEIFQ 134
              I                  +  +             +  A L +            +
Sbjct: 117 EYGIGTLLLVRRPGVGFTELGASVLLSPWAILGGLVAAAVITALLALAIDRVVYKPMRDR 176

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           + +            +    +  +   T                 +  +  +++    L 
Sbjct: 177 SGISLLIVSIGVALVLRYGIQFIYGPGTRPVTSSERTLELGVASIDTHLATIVVVGVGLI 236

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L++T +  A R + DN+                 + +     G +G  +   + 
Sbjct: 237 IGTHYLLQQTKLGTAMRAMSDNKDLALVTGIPTERTITWTWLIGGGLAGASGFLYILIQT 296

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                   +   +++ + VILGG+ S+        ++  V +L                 
Sbjct: 297 L--QFDRGWLLLLLIFAAVILGGIGSIYGAIAGGLVIGLVFQL-------------SPIW 341

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLL 340
             +  +       + LV+L+R   L 
Sbjct: 342 VGSDFNYVAAYAIMILVLLLRPEGLF 367


>gi|316935606|ref|YP_004110588.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315603320|gb|ADU45855.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 297

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 101/306 (33%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A    ++  +  +++        IGA+    L ++Y +  WL +P+
Sbjct: 10  LVNGLVVGTLYGVVAMSFVLIYKATQVVNFAQGELLLIGAWVCWALLAKYQIPFWLGMPL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+ + +  L+       I+ ++++     +         G +          
Sbjct: 70  TLVFMFVFGIAIQIVVLRPMIGEPIISVIMVTIALSTVFQAALKWIFGTSPQPFPQVFTT 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +                 +      L+    +   +  + + +    A R    NQ+
Sbjct: 130 QSVSFAGFQ-----------LQTVYVMSLVVSVAMMIGMAWFFKVSKYGLAMRATAFNQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  ++      A+A+S+    +AG   A      S         I V    ILGG+
Sbjct: 179 VAQSLGISVKSVFAMAWAISATVSAVAGVVVAVVNGVSSGLSAY---GIKVFPAAILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +  +   ++  Y +            +       L ++++++ + 
Sbjct: 236 DSIGGAVLGGIIIGLLENIAQYIDSEYLHW--------GNLYEIAPFYVLIIILMIKPYG 287

Query: 339 LLRLRT 344
           L   + 
Sbjct: 288 LFGTKD 293


>gi|209886584|ref|YP_002290441.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH [Oligotropha carboxidovorans OM5]
 gi|209874780|gb|ACI94576.1| high-affinity branched-chain amino acid transport system
           permeaseprotein LivH [Oligotropha carboxidovorans OM5]
          Length = 295

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 86/308 (27%), Gaps = 26/308 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ S       Y + A G  I+  +   ++        +GA   ++   +       ++
Sbjct: 10  QYVLSGLAIGGCYALVALGFHIMWSTAKAVNFAHGDTLMLGAVLTIMALDQGAPLPLAIL 69

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A       ++       F     +I  ++ +     +L  +  +  G          
Sbjct: 70  GAIAASCVFGILLERFAVRPFAKTTSSIGWMLTTIAIGIMLQAYVTMEFGG--------- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + S                    + +        +    R T I  A + +  +
Sbjct: 121 --FSRALPSPGVEKAISVMGAGVYPQELVIPVVALLAMLGLGWMQRHTLIGRAMQAVSFD 178

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   + +    +F +++A  G AG   A             +  +   ++ I+G
Sbjct: 179 RNAAALMGINVNWMFGFSFGLAAALGGAAGILIAPITQA--SASMGLTLGLKGFAVAIIG 236

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+TS   +  A      V +   G                      +      LV+L+  
Sbjct: 237 GITSAPGVVLAGLGFGVVEKFVEGYIS-------------TAAREIVGFGLTILVLLVFP 283

Query: 337 HSLLRLRT 344
             L   R 
Sbjct: 284 QGLFGKRE 291


>gi|167903033|ref|ZP_02490238.1| ABC transporter, permease/ATP-binding protein [Burkholderia
           pseudomallei NCTC 13177]
          Length = 308

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 104/303 (34%), Gaps = 12/303 (3%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 4   ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 64  GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +   L     + 
Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAWLLYLGLLFVAV 291

Query: 317 NMR 319
            + 
Sbjct: 292 VLA 294


>gi|85705519|ref|ZP_01036617.1| Branched-chain amino acid ABC-type transport system, permease
           component [Roseovarius sp. 217]
 gi|149202324|ref|ZP_01879297.1| Branched-chain amino acid ABC-type transport system, permease
           component [Roseovarius sp. TM1035]
 gi|85669944|gb|EAQ24807.1| Branched-chain amino acid ABC-type transport system, permease
           component [Roseovarius sp. 217]
 gi|149144422|gb|EDM32453.1| Branched-chain amino acid ABC-type transport system, permease
           component [Roseovarius sp. TM1035]
          Length = 293

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 105/312 (33%), Gaps = 27/312 (8%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           + +      +        I+ + A GL+I+ G+ G++++       +GAY+   L +  G
Sbjct: 3   ISSIAFANSLILGLSIAGIFFVAALGLTIIYGTAGVINMAHGEFIMLGAYTVYALQTFMG 62

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +  +L IPV+ ++ GA G  +    +++  +      L    +   ++   + I      
Sbjct: 63  VPYFLCIPVAFVVVGAIGFAIEKSLIRYLYNRPLDTLLATWGVSLVLIQGTRLIFGSDPK 122

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                +                     +   +F  +++     L+A + L   +T     
Sbjct: 123 YVQIPQFLSSN-----------IEVGGLSLGVFRVFIIFMALVLAAGVWLIFYKTDFGIK 171

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R +  N++   S            FA+ +   G+AGA F A    I          +  
Sbjct: 172 IRAVTQNREIAASFGINSGQVYSFTFALGAGLAGVAGALFGAL--NIVLPTMGMGYVVEA 229

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
              V+ GG  +L   A A+  +  +      +    F                L+ + + 
Sbjct: 230 FLTVVTGG-GALLGSAIASLAIGELQSFFALITNSTFAK-------------FLIFVLIV 275

Query: 330 LVILMRSHSLLR 341
           + +  R   L+ 
Sbjct: 276 VFLRFRPQGLIS 287


>gi|322835574|ref|YP_004215600.1| inner-membrane translocator [Rahnella sp. Y9602]
 gi|321170775|gb|ADW76473.1| inner-membrane translocator [Rahnella sp. Y9602]
          Length = 297

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 89/304 (29%), Gaps = 16/304 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++    I+     + A GLS+V G +   ++  +    +G++               ++
Sbjct: 3   QFLIDTLIRTADLSLVALGLSLVYGLVRFANIAHMQYAMVGSFITAAGLRLGMPLALAIV 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + +      ++             A A +    +   ++     +       Y     
Sbjct: 63  FSALVCGMLSMILHHWVYQPLLKSGTANAMIGSLAVSMVLIALVLGVEGSAPVNYSLPVG 122

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
             L      +     +     I  + ++ +LL              RT    A R +  N
Sbjct: 123 ALLQVGDTRISSDELWGLGVTISLVVVFSLLLF-------------RTPQGRAIRALASN 169

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +    +          +   ++     + G+  A +              + V++  ILG
Sbjct: 170 RDLAAASGLNASAIIHTVNLLAGMLAAVGGSMLAMNASA--WVNQGNDLMLPVLAAAILG 227

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +         ++     L   +++ +              + +   + L L +L+R 
Sbjct: 228 GLGNPMGAIFGALLIAATETLVTNIDWSWLFGGDLLFIPVTWVNASSF-VILLLALLLRP 286

Query: 337 HSLL 340
           + L 
Sbjct: 287 YGLF 290


>gi|119719513|ref|YP_920008.1| inner-membrane translocator [Thermofilum pendens Hrk 5]
 gi|119524633|gb|ABL78005.1| inner-membrane translocator [Thermofilum pendens Hrk 5]
          Length = 299

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 98/304 (32%), Gaps = 15/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   +  + + GLS+ + +  + +        IG Y    L     ++ +  IPV
Sbjct: 7   LVDALVYGNLLALLSVGLSLTLLTTEVSNFAHGDFAVIGIYIAYTLSQVLNVTPYAFIPV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G+ +         D  +  TL++  +    ++++              +   
Sbjct: 67  AFAGGALVGLAVYFLVFDPLRDKASFVTLMIVSMALEFILRYS-----VQIYADVMQRLL 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +    R     +  +  + Y  +    L   + ++L RT    A R   +N +
Sbjct: 122 KTFGRGFMFNDVRLALLGLHVDGVVVYSSITTLSLLVLLYVFLYRTKTGTAMRAAIENPQ 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +      ++ +S+ F   A A        +      FS  + + + V +GG+
Sbjct: 182 LAQTLGINVKKVYAYSWMLSAGF--AAAAGVFLPFKIVVNPDTGFSLLLSMFAAVTVGGL 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL+       ++          +       L            +  +++ +V+L+    
Sbjct: 240 GSLAGSLVGAYLI--------SFSEIAATYFLSSLGLSTSYRALVSFLSIAVVLLLSPRG 291

Query: 339 LLRL 342
           L  L
Sbjct: 292 LAGL 295


>gi|83590850|ref|YP_430859.1| inner-membrane translocator [Moorella thermoacetica ATCC 39073]
 gi|83573764|gb|ABC20316.1| xylose ABC transporter membrane protein [Moorella thermoacetica
           ATCC 39073]
          Length = 397

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/359 (12%), Positives = 96/359 (26%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  L  ++ +  +   GA  + + + ++  Q+ I  + A G+  V+   G + L+
Sbjct: 30  RAYTMILALLGIWAIFTYTTQGAFLTSRNLSNLFRQMSITSILAIGMVFVI-VAGHIDLS 88

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT--- 126
                 +      IL   YG      I +S +I    G+  G      +     +     
Sbjct: 89  VGSLMGLTGGVAAILQVWYGWQTIPAIFISFLIGLLAGLWQGWWVAYKKVPAFIVTLGGM 148

Query: 127 --------------------------------------LIMSEIFQNILIKWKPITNGKA 148
                                                 L    I   I +  K       
Sbjct: 149 MVFRGILIGISHGETVSPLMDSFKQIGQSYVPESTGFLLAFLGIIYVIYVTVKQRYTRIK 208

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
             +    L                    +     +   +L +  ++        +T    
Sbjct: 209 YGFTVPSLALEIMRTIFYAFLIGLFVYLMNDYQGIPVPVLIVVAMAFIFTGLATKTRFGR 268

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N +A       I +  L+ F +S     ++G    A  +  S    + +E   
Sbjct: 269 YVYAIGGNSEAARLSGINIRYNILAVFVISGLMAALSGILLTARLNGASVAAGQNAELDA 328

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + VI     +GG  S+        ++  +      MN   F   +       +    
Sbjct: 329 IAACVIGGTSLMGGTGSIGGAMIGALVMASLDNGLSMMNTPTFWQFIVKGLILVLAVWI 387


>gi|126727104|ref|ZP_01742941.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2150]
 gi|126703532|gb|EBA02628.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2150]
          Length = 351

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 106/344 (30%), Gaps = 47/344 (13%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI--------------- 83
           + +   +   Y + A GL+++ G+LG+++      + IGA+  V                
Sbjct: 11  VLNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFCAVTLQKILNLSSITIDPT 70

Query: 84  ------------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
                                     +    S+ L I V+  +  A G +M    +K   
Sbjct: 71  QTDFLGNPLKVKTPYVINWFGEVAGSAIINWSVPLAILVAIPVMLAVGYVMERGLIKHFY 130

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
                  ++++     +L +      G   I       F G+    ++    F ++ +IY
Sbjct: 131 KRPHADQILVTFGLAIVLQEIIKANYGANPIPTPAPDAFHGSYDFGVM--IGFEANAIIY 188

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
            ++          +  ++  +LR T      R    +++    L   I       F +++
Sbjct: 189 PVWRLIYFCFSALVIGAVFAFLRFTTFGMVVRAGMADRETVGLLGINIDKRFTIMFGIAA 248

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  G+AG  +             F     V+ +V    M SL     A  +L  +     
Sbjct: 249 AVAGLAGVMYTPINSPNYHMGMDFLVLSFVVVVVGG--MGSLPGAVLAGFLLGVLE---- 302

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                                  ++ +   +V+L R   LL  +
Sbjct: 303 SFASMNAVKGFFEAIYLPSIDQIVIYLVAIIVLLTRPRGLLGRK 346


>gi|167630481|ref|YP_001680980.1| ribose transport system permease protein rbsc [Heliobacterium
           modesticaldum Ice1]
 gi|167593221|gb|ABZ84969.1| ribose transport system permease protein rbsc [Heliobacterium
           modesticaldum Ice1]
          Length = 313

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/322 (13%), Positives = 89/322 (27%), Gaps = 29/322 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +L +Y     +  V+  + L L      +   I ++  Q+ I  + A G++ V+   G +
Sbjct: 7   KLRRYRMGPLIGLVLICIALTLMSDRFFTPANILNIARQVSINTLLAVGMTFVI-ISGGI 65

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A          +    +  +L+    +      +            Y  IA 
Sbjct: 66  DLSVGSILAFAGALAAGALASGIDTGLVLLYACLIGLAGGTL------NGLLIAYGRIAP 119

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
            + +     +      I                            F +    Y   +   
Sbjct: 120 FVATLGTMTLFRGATLIY---------------TEGRPIRAVEEGFNAIGGGYLGPIPTP 164

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           ++    +       L R  +      +  N++A         ++K+  +AVS    G+AG
Sbjct: 165 VVITAVMVFLAWFVLNRMTVGRRVFAVGGNEEAAVLSGVKATYSKVFVYAVSGLMCGLAG 224

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCG 300
           A   +      P        +  I+ V+LGG         +        I+  +      
Sbjct: 225 AILTSRLMSAQPTA-GAGYELDAIAAVVLGGTSLSGGQGGVLGTLVGALIIGVLDNGLNI 283

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +N   F           +    
Sbjct: 284 LNVSSFYQQAVKGIVILIAVLL 305


>gi|91978520|ref|YP_571179.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91684976|gb|ABE41278.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 336

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 103/334 (30%), Gaps = 16/334 (4%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +  +    + L   +  L+L L    +       +     ++  + A GL++V G + +L
Sbjct: 12  KPKRDLAPVLLPVFLALLMLPLVGSFSSWVTLTVASLAMGMMIFIMASGLTLVFGLMDVL 71

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           +       A+GAY   ++            +  +  +     +     S         + 
Sbjct: 72  NFGHGAFIAVGAYVATLVLLPLAGMSQADSLLTNLAVLAPAALAAMAVSGALGLVVERLL 131

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            L +       ++              A     +            F    +    +   
Sbjct: 132 ILPVYGQHLKQILMTTGGLIVAEQALYALWGPQIIPVPLPTALRGSFIIGDIAIAKYRLL 191

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           V+L    +  +I L L RT I    R   +N++   +L   I    L  F V SA  G  
Sbjct: 192 VMLVGIAVFVAIQLVLNRTKIGLLIRAGVENREMVEALGYHIKRLFLGVFMVGSALAGFG 251

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  +A  R+++          ++V  +VI+GG+ S+        ++  V      +    
Sbjct: 252 GIMWALYREQV-HASMGNDLTVLVFIVVIIGGLGSIGGCFIGALLVAMVANYGGFL---- 306

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
                              ++ +  +++ R   L
Sbjct: 307 ----------VPKLALVSNILLMVAILMWRPRGL 330


>gi|121600520|ref|YP_992769.1| ABC transporter, permease protein [Burkholderia mallei SAVP1]
 gi|167001572|ref|ZP_02267367.1| ABC transporter, permease protein [Burkholderia mallei PRL-20]
 gi|121229330|gb|ABM51848.1| ABC transporter, permease protein [Burkholderia mallei SAVP1]
 gi|243062678|gb|EES44864.1| ABC transporter, permease protein [Burkholderia mallei PRL-20]
          Length = 308

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 105/314 (33%), Gaps = 25/314 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M   GL+++ G LG+L+      Y +GAY+   + +R    + L+   
Sbjct: 8   LLNGLSYGLLLFMLCAGLTLIFGMLGVLNFAHASFYMLGAYAGYAIAARTSFWVALVAAP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+ +        L        +L    L     +               G+ +   L  
Sbjct: 68  LAVGALGALCERTLLRRVRASGHLDELLLTFGLAYLI-----------AEGVKLVWGLAP 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   V + +    F     ++  +  +++L    +  ++   LR +      R     + 
Sbjct: 117 LAAPVPAALDGAAFTVYGAVFSRYRAFMMLVSIAMLGALWAVLRASRTGLVVRAALTRRA 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  +L   +       FA  +A  G+ GA  A     +       +   +V +++++GG+
Sbjct: 177 AVEALGHDVPRVMTLVFAAGTALAGVIGAPLA-----VIEPAMAQTLGSVVFAVIVIGGL 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT---------TLMVIALF 329
            SL+    A+ +L               ++      +                +  + L 
Sbjct: 232 GSLAGALVASLVLGCAQTFAAASRASLSDAAQLAGIALPDAWRALTLAQFAPLIPYLLLI 291

Query: 330 LVILMRSHSLLRLR 343
           +V+  R+  L   R
Sbjct: 292 VVLACRARGLFGER 305


>gi|260459977|ref|ZP_05808230.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259034188|gb|EEW35446.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 302

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 89/317 (28%), Gaps = 20/317 (6%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY-----VILGSRY 88
            S +++    +   +  + A G+++    L   +       A G Y+       I     
Sbjct: 1   MSLQFVVDGLLTGSMIGLGAIGVTLTYSILRFSNFAHGDFMAWGTYATLAVVSAIGVMFG 60

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            ++    +     +  A  + M   +L        +   + S+    I++      +   
Sbjct: 61  KVAPIAPLSFGWPLIVALIVGMAFTALLALLLDKVLFARLRSQGQAIIVVMASFGASMAL 120

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
              +        T     I+        +        +LL    L   + L + RT    
Sbjct: 121 RSLLEFTFTSRPTYFSRAIQIAMPVGFGIRITPDQIALLLLTAVLVLGVHLLMTRTQTGR 180

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
           A + +  N      +   +       + +  A   +AG                F   + 
Sbjct: 181 AMQALSQNAALARIVGIDVASVVRVTWIIGGALACVAGVMIGILVQI--RPFMGFDMLLP 238

Query: 269 VISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           + +  ILGG+ S+        I+         +    + + + F             + L
Sbjct: 239 MFAAAILGGIGSIPGAVLGGLIIGLAEAGAVQLVGAEWRAAVSF-------------VIL 285

Query: 329 FLVILMRSHSLLRLRTP 345
             V+ +R   L  +R  
Sbjct: 286 MAVLFVRPIGLFGVRER 302


>gi|148269947|ref|YP_001244407.1| monosaccharide-transporting ATPase [Thermotoga petrophila RKU-1]
 gi|170288632|ref|YP_001738870.1| monosaccharide-transporting ATPase [Thermotoga sp. RQ2]
 gi|281412172|ref|YP_003346251.1| inner-membrane translocator [Thermotoga naphthophila RKU-10]
 gi|147735491|gb|ABQ46831.1| Monosaccharide-transporting ATPase [Thermotoga petrophila RKU-1]
 gi|170176135|gb|ACB09187.1| Monosaccharide-transporting ATPase [Thermotoga sp. RQ2]
 gi|281373275|gb|ADA66837.1| inner-membrane translocator [Thermotoga naphthophila RKU-10]
          Length = 317

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 91/297 (30%), Gaps = 27/297 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL-LSLNCVIAY 74
            +  V   +   +      +   + ++G QI I+ + A G + V+ S G  + L+     
Sbjct: 16  LVALVSLAVFTAILNPRFLTAFNLQALGRQIAIFGLLAIGETFVIISGGGAIDLSPGSMV 75

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       L +   + +W+ + +  + S   G   GL   K R                
Sbjct: 76  ALTGVMVAWLMTH-SVPVWISVILILLFSIGAGAWHGLFVTKLRVP-------AFIITLG 127

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + I          G  +           +        P             +  +  ++
Sbjct: 128 TLTIARGMAAVITKGWPIIGLPSSFLKIGQGEFLKIPIP-------------VWILLAVA 174

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                +LR+T      R    N+ A       +   ++ AF VS    G+ G   AA   
Sbjct: 175 LVADFFLRKTVYGKHLRASGGNEVAARFSGVNVDRVRMIAFMVSGFLAGVVGIIIAARLS 234

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +  P +    E   + S VI      GG  S+       +I+  +      +N   +
Sbjct: 235 QGQPGVGNMYELYAIASTVIGGTSLTGGEGSVLGAIVGASIISLLWNALVLLNVSTY 291


>gi|22127924|ref|NP_671347.1| sugar transport system permease [Yersinia pestis KIM 10]
 gi|21961064|gb|AAM87598.1|AE014007_2 inner membrane permease of D-xylose ABC transporter [Yersinia
           pestis KIM 10]
          Length = 397

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 49/355 (13%), Positives = 97/355 (27%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  +A++     F   GA  S + I ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 36  MLAAIAIIMLFFTFTTEGAYLSARNISNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 94

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM---- 129
             +      I     G  + L I V+  +    G   G      +     +    M    
Sbjct: 95  MGLLGGIAAIFDVWLGWPLPLTIVVTLALGLVLGAWNGWWVAYRKVPSFIVTLAGMLAFR 154

Query: 130 -------------------------------------SEIFQNILIKWKPITNGKAGIYV 152
                                                  +   +  +W+   +       
Sbjct: 155 GILIGITNGTTVSPTSNAMSQIGQSYLPSGIGFGIGAIGLMLFVAWQWRRRNHRIRLGLP 214

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                   T               +     +   +L +  L  + +    RTA       
Sbjct: 215 VAAPQGDVTRQTITAVIVLGAIYLLNDYRGVPTPVLILTALMLAGVFMATRTAFGRRIYA 274

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N  A       +   KL+ FA++   + MAG   ++     SP     +E   + + 
Sbjct: 275 IGGNIDAARLSGINVERTKLAVFAINGLMVAMAGLILSSRLGAGSPSAGNIAELDAIAAC 334

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 335 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGAILLLAVWM 389


>gi|327399166|ref|YP_004340035.1| ABC transporter integral membrane subunit [Hippea maritima DSM
           10411]
 gi|327181795|gb|AEA33976.1| ABC-type transporter, integral membrane subunit [Hippea maritima
           DSM 10411]
          Length = 290

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/308 (11%), Positives = 89/308 (28%), Gaps = 27/308 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y  +  I  LIY + A G +I+  S+ +++        +G      L          L+
Sbjct: 6   QYTINGIITGLIYALVAIGFNIIYSSVRIVNFAQGEFIMLGGVVEFYLLGLGWPVFLSLL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             S  +     ++  +     +     ++ +I++     ++     +  GK    V + L
Sbjct: 66  VSSVFVGVVGILVYFIFIKNTK-RPTELSLIILTIGISVLIRGVTMVIFGKNAYPVGNFL 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                       F     + + +      V   + FL   +  +  +T     +     N
Sbjct: 125 S-----------FESINLANLTFSSQYLVVFFVVVFLVGILFWFFSKTLTGKLFLASSLN 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             A       +      +F +S     + GA  A                +   +  ++G
Sbjct: 174 PLACRLFGVNVSNLSAMSFFISGLVGAIGGAVIAP--ISFVKYDMGLMFGLKGFAASVVG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G  +         ++     L  G     +  ++ F             + +  V+ +  
Sbjct: 232 GFGNNIGAVVGGLVIGISESLAAGYVSSSYKDMVAF-------------VVMIAVLFIAP 278

Query: 337 HSLLRLRT 344
             +   + 
Sbjct: 279 EGIFGSKD 286


>gi|153949940|ref|YP_001400827.1| ribose ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|186895588|ref|YP_001872700.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
 gi|152961435|gb|ABS48896.1| ribose ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|186698614|gb|ACC89243.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
          Length = 353

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 89/313 (28%), Gaps = 10/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +V   +         S     +M   + I+ + A G+ ++V   G + L+     
Sbjct: 36  AFFALLVIIAVFSFLSPNYFSGANFLTMASHVAIFGLPAIGM-LLVILNGGIDLSVGSTL 94

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       L     +    ++    + +     +     +      L    + +  +  
Sbjct: 95  GLSGVFAGFLMQGISIESLGVVLYLPVWAVVIMTLALGALVGLINGIL----IAIFRVPA 150

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +           A + + + L +        +    F          +   +L +  ++
Sbjct: 151 FVATLGSLYVARGAALLMTNGLTYNKLAGSPELGNTGFDWLGFNRLFNIPIGVLALGVVA 210

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    L RTA          N++A       + F K+S + +S     +AG   ++   
Sbjct: 211 LACGFLLMRTAFGRWLYASGGNERAADLSGVPVKFVKISVYVLSGVCAALAGLVLSSQLT 270

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG  ++        ++  + +    +    +   
Sbjct: 271 SAGPTAGTTYELTAIAAVVIGGAALTGGRGNVRGTLLGAFVIGFLSDGLVIIGVSAYWQT 330

Query: 310 LKFDCSFNMRHTT 322
           +       M    
Sbjct: 331 VFTGAVIVMAVLL 343


>gi|296268409|ref|YP_003651041.1| inner-membrane translocator [Thermobispora bispora DSM 43833]
 gi|296091196|gb|ADG87148.1| inner-membrane translocator [Thermobispora bispora DSM 43833]
          Length = 288

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/300 (14%), Positives = 98/300 (32%), Gaps = 26/300 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                +Y + A GLS++ G + +L+        +GAY+  ++    G  +  +    A+ 
Sbjct: 12  LGLAALYFLVASGLSLIYGLMDVLNFAHGAFLTLGAYTAWVVVDATGSLLLGVAVAIAVG 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +    ++      +  G ++    L +  +     +              +         
Sbjct: 72  AVLAVLMETALLRRMYGSHVPQVLLTVGLLLAITAL------------IRSIFGTDALQL 119

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                                + +++    +  ++  +L +T      R   +N+    +
Sbjct: 120 ATPEWMNEVTEILGAPIPNNRFVLIVTAVLVYLAMSAFLAKTRYGLIIRAGVENRAMVTA 179

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   +  A    FA+  A   +AGA      + +SP+    S  I    +VI+GG+ S  
Sbjct: 180 LGIDVRRAFTLVFAIGGALAALAGALAGVINNAVSPEQ-GMSLLIFAFIVVIIGGLGSFR 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             A A  ++  + +                          ++V+ L  ++L+R   LL  
Sbjct: 239 GSALAAVLVGLLQQYANFYGAVGAGD-------------LIVVLMLAAILLVRPQGLLGR 285


>gi|260574705|ref|ZP_05842708.1| inner-membrane translocator [Rhodobacter sp. SW2]
 gi|259023122|gb|EEW26415.1| inner-membrane translocator [Rhodobacter sp. SW2]
          Length = 433

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 94/271 (34%), Gaps = 22/271 (8%)

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
             PV  +++ A    +G  +L  R DYLAIATL ++EI  +++     +  G   +    
Sbjct: 163 AWPVGGLLAAAAAWAIGKTALGLRSDYLAIATLGIAEIIISVMKNEDWMARGVKNVIGLP 222

Query: 155 RLY-----------FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
           R +                      F     S ++ ++    +   +      +      
Sbjct: 223 RPWPVPYEVELQQSQGFLGWAQSWGFDPVTGSSILVKLIYAGMFGLVLLAIIWLSELALN 282

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           +      R IRDN+ +  ++   +    L  F + SA +G+AGA   +   +++P  +  
Sbjct: 283 SPWGRMMRAIRDNEVSAAAMGKNVTRRHLQIFIIGSAIVGVAGAMMTSMDGQLTPGTYNP 342

Query: 264 S-ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM---- 318
                ++  +VI+GG  +         ++  +  +   +      ++        +    
Sbjct: 343 LRYTFLIWVMVIVGGSGNNWGAVLGGLLIGWLWLIVESLGPQVMGAITAGMADGALKTHL 402

Query: 319 ------RHTTLMVIALFLVILMRSHSLLRLR 343
                      + I L LV+      L+  +
Sbjct: 403 IDSAQHMRLLTLGIILLLVLRFSPRGLIPEK 433



 Score = 37.9 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 32/79 (40%)

Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
          +        LF+  G  +S     S+    L+  + A G+++  G  GL +   +   A+
Sbjct: 6  IGLFAGVAALFVATGMLQSWNLSLSILNMALLSSIMALGVNMQWGYAGLFNTGIMGFTAL 65

Query: 77 GAYSYVILGSRYGLSIWLL 95
          G  + V++ S+     W  
Sbjct: 66 GGLAVVLVSSKPTPGGWSA 84


>gi|73541342|ref|YP_295862.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72118755|gb|AAZ61018.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 340

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 95/311 (30%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+      +      S + +  +  Q  I ++ A G++ V+   G + L+     +I 
Sbjct: 41  VLVLLCAGFTVLTDNFASLQNLSIIAQQASINLVLAAGMTFVI-LTGGIDLSVGSILSIS 99

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S       L +P + +     G++ G      +     +             
Sbjct: 100 A-VAAMLTSLTPELSALSVPAALLCGLLFGLVNGALIAFMKLPPFIVTL----------- 147

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                       +    RL    +T+ +    F F  +  +  +    ++ G     + +
Sbjct: 148 -------GSLTAVRGLARLVGHDSTLYNPDIGFAFIGNGDVLGVPWLVIIAGAVIAVSWV 200

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +L  RRT +      +  N +A       +    L  +AVS    G+ G   A+     +
Sbjct: 201 VL--RRTVLGLQIYAVGGNAEAARLSGIKVWVVLLFVYAVSGLLAGLGGVMSASRLYAAN 258

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 259 GLQLGQSYELDAIAAVILGGTSFVGGVGSIGGTLIGALIIAALSNGLVLLGVSDIWQYII 318

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 319 KGLVIIGAVAL 329


>gi|13471676|ref|NP_103243.1| permease protein of sugar ABC transporter [Mesorhizobium loti
           MAFF303099]
 gi|14022420|dbj|BAB49029.1| permease protein of sugar ABC transporter [Mesorhizobium loti
           MAFF303099]
          Length = 707

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 72/261 (27%), Gaps = 16/261 (6%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
           + I  L  VV        +        +     Q+  + M   G+++V+   G + L+  
Sbjct: 31  NAIPFLALVVTLATFGSIIPGFFKLNALQESTRQLGEFSMVVTGMTVVM-LGGGIDLSVG 89

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +A+  +S V +      SIWL +  S       G I G      R        +    
Sbjct: 90  SIFALSCFSAVYVFFILEQSIWLALAASLATGLIFGAINGYLVGYLRLRAFLTTLVTFIF 149

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                 I                    L T    ++ F    + + +       ++L + 
Sbjct: 150 GRALFDILVT----------TYAADVQLSTATSDVLDFIGDSTFWGLSVSVWLAIILAIV 199

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
              A       R+        +  ++++  +    +       +  S     + G   A 
Sbjct: 200 THIAL-----TRSRPGWHVLAVGGSRRSAHNAGIRVRRTVFMTYVFSGFCASIGGFLIAC 254

Query: 252 SRDRISPDMFKFSENIIVISI 272
                 P      E + + + 
Sbjct: 255 RLSGAGPGTGLNLEIMALTAA 275


>gi|154503937|ref|ZP_02040997.1| hypothetical protein RUMGNA_01763 [Ruminococcus gnavus ATCC 29149]
 gi|153795364|gb|EDN77784.1| hypothetical protein RUMGNA_01763 [Ruminococcus gnavus ATCC 29149]
          Length = 311

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 86/312 (27%), Gaps = 25/312 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  V+  +++       ++     S+  Q  I  + A+G++ V+   G + L+     
Sbjct: 15  ALIALVLLIVVIGAISPEFRTVGNFLSLLRQSSINGLIAFGMTCVI-LTGGIDLSVGSVL 73

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+         S        +I    + +G   +   L +                + F 
Sbjct: 74  ALTTALCAGFISGGMPVGLAMILALVIGTGFGCISGFLVTKGR------------LQPFI 121

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             LI                 +  LG +    +          I  I    +        
Sbjct: 122 ATLITMTVFRGLTMIYMDGKPISNLGDSFTLKVVGKGNFYHIPIPVILFLLIF------- 174

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L++T           N KA       I   KL+A+A+S     ++G    +   
Sbjct: 175 VIFLFVLQKTTFGRHIYATGSNAKAANLAGVNIDCTKLAAYAISGCMAALSGLILLSRLG 234

Query: 255 RISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P + +  E   + ++ +      GG   +        I+  +      +    +   
Sbjct: 235 SAQPTLGEGYELDAIAAVALGGTSMNGGRGKIWGTFIGVLIIAVLNNGLNILGVSSYYQD 294

Query: 310 LKFDCSFNMRHT 321
           +       +   
Sbjct: 295 VVKGIVILIAVL 306


>gi|225569622|ref|ZP_03778647.1| hypothetical protein CLOHYLEM_05716 [Clostridium hylemonae DSM
           15053]
 gi|225161092|gb|EEG73711.1| hypothetical protein CLOHYLEM_05716 [Clostridium hylemonae DSM
           15053]
          Length = 319

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 86/324 (26%), Gaps = 25/324 (7%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F+++       + L  VV  +   +      +   + +M  Q  I  + A G++ VV   
Sbjct: 9   FNIKEFLAKYGVILGLVVIMIFFTVMKARFLTVTNMLNMLRQASINGLLALGMTFVV-LT 67

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+   A         ++        W +  ++ +  G     +    + +      
Sbjct: 68  GGIDLSVGSAVGAAGMYCALVARTETGMPWYVALLTGLAIGLLIGTINGVVIAYLRVPAF 127

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           IATL M  I + I               +                    P   +I  + +
Sbjct: 128 IATLGMLSIARGITFM------ASDAKPIPGLSKEFLVIGGGSAGIIPIPVLILIGVLIV 181

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
            Y++L              +T           N  +       I     S + +S    G
Sbjct: 182 CYIIL-------------YKTRYGRYVFATGGNATSARVSGINIKMVICSVYMISGLLAG 228

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +AG    +             E   + + VI      GG   L        I+  +    
Sbjct: 229 LAGVILTSRVTSGISQNGDGYEVDAIAAAVIGGNSLSGGRGRLWGTVVGFLIMGVMNNGL 288

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTT 322
             M    +  L+            
Sbjct: 289 DMMAVSSYWQLVIKGIIIIGAVML 312


>gi|225569685|ref|ZP_03778710.1| hypothetical protein CLOHYLEM_05779 [Clostridium hylemonae DSM
           15053]
 gi|225161155|gb|EEG73774.1| hypothetical protein CLOHYLEM_05779 [Clostridium hylemonae DSM
           15053]
          Length = 331

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 93/289 (32%), Gaps = 28/289 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ +   +L  +      S   + ++  Q+ +  + A+G  ++V   GL+ L+     
Sbjct: 17  IFIVLLAMFILCAVLNENFLSVNNLTNVARQLSVGTIIAYGEMLLV-IAGLIDLSVGSVL 75

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+     +      G  +  L+    +      +   L +         IATL M  + +
Sbjct: 76  ALAGVLSIACYQSTGSLLLALLLAVVVGVLCNLVNAVLVTHF--DVPAFIATLAMQTMAR 133

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              + +    N                    L++   F          +   ++ M  ++
Sbjct: 134 GAALLYTKGQN--------------------LLQLKDFTVFGQGSVGPIPMPIIFMVVIT 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 +  T    +   I  N+ A  +    +   K   + ++  F G+AG  F +  +
Sbjct: 174 IITWYIMNHTRYGRSLYAIGGNEGAAIASGINVKKNKYITYIINGVFAGIAGVLFMSRVN 233

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
              P+     E   + + ++      GG+ +         I+  +  + 
Sbjct: 234 AGLPNGAVGYEMEGLTATIVGGTSFSGGVGTTMGTLAGAFIIGFLNNIM 282


>gi|254504295|ref|ZP_05116446.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222440366|gb|EEE47045.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 343

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 54/344 (15%), Positives = 108/344 (31%), Gaps = 52/344 (15%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---------------- 82
           I +   +   Y + A GL+++ G+LG+++      + IGA+  V                
Sbjct: 8   ILNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFCAVTLNRLLSVSFTTIDDT 67

Query: 83  -----------------------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
                                  + G+    S+ L I  S  I    G+ M    +K+  
Sbjct: 68  RTDFLGNPLKVETPYVEAWFGPEMGGAIIDWSVPLAILFSIPIMALVGLFMERGLIKYFY 127

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
                  ++++     +L +      G   I       F G+             + +IY
Sbjct: 128 KRPHADQILVTFGLAIVLQEIIKYFYGANPIPTPAPEVFAGSFDFGA--LIGMDPNIIIY 185

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
             +     L    +   +  +L+ T      R    +++    L   I       FA+++
Sbjct: 186 PYWRIVYFLFATVIIGGVFAFLQFTTFGMVVRAGMADRQTVGLLGIDIDRRFTVMFALAA 245

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
              G+AG  +A            F     V+ +V    M SL     A  +L  +     
Sbjct: 246 IVAGLAGVMYAPINSPNYHMGMDFLVLSFVVVVVGG--MGSLPGAVAAGFLLGILES--- 300

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                 F S+ +        +  ++ +   +++L R   LL  +
Sbjct: 301 ------FASMAQVVALLPGINQIIIYLVAIVILLTRPRGLLGRK 338


>gi|146342119|ref|YP_001207167.1| putative high-affinity branched-chain amino acid transport system
           permease [Bradyrhizobium sp. ORS278]
 gi|146194925|emb|CAL78950.1| putative High-affinity branched-chain amino acid transport system
           permease protein [Bradyrhizobium sp. ORS278]
          Length = 297

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 100/306 (32%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A    ++  +  +++        IGA+    L +++ +  W  +P+
Sbjct: 10  LVNGLVVGTLYGVVAMSFVLIYKATQVVNFAQGELLLIGAWVCWTLLTKFQVPFWAGMPL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +   A G+ + +  L+       I+ ++++     +         G            
Sbjct: 70  SLIFMFAFGIAIQVVILRPMIGEPIISVIMVTIGLSTVFQAALKWIYGVNPQPFPPVFS- 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +  +      L+    +   +  + + +    A R    NQ+
Sbjct: 129 ----------SKAVDIFGLQIQTVYVMSLVVSVLMMLGMAWFFKASKYGLAMRATAFNQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  ++      A+A+S+    +AG   A      S         I V    ILGG+
Sbjct: 179 VAQSLGISVKSVFAMAWAISATVSAVAGVVVAVVNGVSSGLSAY---GIKVFPAAILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +  +   ++  Y +            +       L ++++++ + 
Sbjct: 236 DSVGGAVLGGIIIGLLENIAQYVDSQYLHW--------GNLYEIAPFYVLIIILMIKPYG 287

Query: 339 LLRLRT 344
           L   R 
Sbjct: 288 LFGTRD 293


>gi|323489173|ref|ZP_08094405.1| ribose ABC transporter (permease) [Planococcus donghaensis MPA1U2]
 gi|323397060|gb|EGA89874.1| ribose ABC transporter (permease) [Planococcus donghaensis MPA1U2]
          Length = 314

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 95/313 (30%), Gaps = 27/313 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +   ++ +      S   + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 17  FIGLFLIMTIITILNPDFLSVSNLMNVLRQVSINALIAFGMTFVI-LTGGIDLSVGSTLA 75

Query: 76  I-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           + GA +  ++ S       +L+ +           + +   K       +AT+ +     
Sbjct: 76  LTGAVTAGLMASGVDPIFAMLLGLLLGAILGAINGIIIAKGKVAPFIATLATMTIYRGLT 135

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +    +PI+                     L     F      Y + +   ++ M    
Sbjct: 136 LVYTDGRPISG--------------------LGDSLTFQMLGKGYFLGVPIPVVTMIISF 175

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A +   L++T        +  N++A           K+  +++      +A     +  +
Sbjct: 176 AILYFILKKTTFGRRVYAVGGNEEASILSGINADRIKIYVYSLLGLLAAVASLILTSRLN 235

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P   +  E   + ++V     + GG   +        I+  +      +    F   
Sbjct: 236 SAQPTAGEMFELDAIAAVVLGGTSLTGGRGWIVGTLIGALIIGVLNNGLNLIGVTSFFQQ 295

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 296 VVKGAVILLAVLL 308


>gi|239820781|ref|YP_002947966.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239805634|gb|ACS22700.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 290

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 97/303 (32%), Gaps = 21/303 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   +Y +FA G S++ G + L +        +GA++ +   S  G +   L+ +
Sbjct: 5   VIQGVLLGGLYTLFALGQSLMFGVMRLTNTAQGDFIILGAFAVIAGVSVAGDATPGLVAM 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+       + G    ++      +   +  +   ++++ +      +  +        
Sbjct: 65  VALAVLPVAFVFGYALQRY-----VLNGTLGKDPLPSLVVTFGLSIVIQNLLLELFSADP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L          +   +    VL      +A++     RTA+  ++R + D+++
Sbjct: 120 RAIETGGLSTQGVALGDTLSLGVLPLVVLAVALVATAALQWLFARTALGRSFRAVSDDRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +          A A++   I +AGA                   +     VI+GGM
Sbjct: 180 IAELMGLDAKKVYAFATAIAFVLIAIAGALQGMRTTV--SPSDGPLLLLFAFEAVIIGGM 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         IL    ++   ++  +                    I   +V+++R   
Sbjct: 238 GSFWGTLAGAMILGITQQIGFRLDPGWGIWFGH--------------IVFLVVLVLRPQG 283

Query: 339 LLR 341
           L  
Sbjct: 284 LFP 286


>gi|146339549|ref|YP_001204597.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146192355|emb|CAL76360.1| putative ABC transporter permiase component [Bradyrhizobium sp.
           ORS278]
          Length = 277

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 91/297 (30%), Gaps = 22/297 (7%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
             L+Y + A GL+++ G + +++        I  Y+   L + + L   L  P+ A    
Sbjct: 1   MGLLYGLIAVGLALIFGLMDVVNFAHGEFLMIAMYATFFLFAYFALDPLLSAPIVAAGLF 60

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
             G ++ L  ++F       A    +      +     +     G+          +   
Sbjct: 61  VFGAVVYLLIVRF-------AVRAKANTGMVQIFSTFGLAVLMRGVAQYFFTPDYRSIPH 113

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           S +       + +          L      A +  ++ RT    A    R++  A   + 
Sbjct: 114 SWLGGKTISIAGIYLPQPQLVGALIAIAAFAGLYFFIHRTDFGRALEATREDAGAVALVG 173

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                     + + +A +G+AGA  A            F+    V   V LGG  S+   
Sbjct: 174 IDKNKVFALGWGLGAALVGLAGAVMAIFFYVFPDVGASFATIAYVT--VALGGFGSVFGA 231

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                ++  V  +   +      ++              +     LV+ +R   L  
Sbjct: 232 FAGGIVVGLVEAITTLILPASLKTVG-------------IYAVYLLVVFIRPRGLFG 275


>gi|121592899|ref|YP_984795.1| inner-membrane translocator [Acidovorax sp. JS42]
 gi|120604979|gb|ABM40719.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidovorax sp. JS42]
          Length = 309

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/310 (10%), Positives = 94/310 (30%), Gaps = 18/310 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA-----YSYVILGSRYGLSIW 93
           +    +  ++Y + A G  ++  + G+ +          A     ++  I       +  
Sbjct: 8   LIGGLMAGMLYALVALGFVLIFKASGVFNFAQGAMVLFAALAMARFAEWIPAWTGISNPI 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           +    + +I+G C   +     +    +L         +    +  +             
Sbjct: 68  VANLAAFLIAGLCMFAVAWFIERLVLRHLVNQEGATLLMATLGITYFLEGLGQTLFGSDI 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            ++          +    F    ++ +            L   + ++ ++T    A R +
Sbjct: 128 YKIDIGMPKDPVFLLDTVFEGGVLVNK-EDVIAAGIAAALVVVLSIFFQKTKTGRALRAV 186

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            D+ +A  S+   +    +  + V+     +AG  + +            +  +  + +V
Sbjct: 187 ADDHQAAQSIGIPLNHIWVIVWCVAGVVALVAGMIWGSKLGV---QFSLTTVALRALPVV 243

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ILGG+TS+        I+    +L       +    ++   +          +   + +L
Sbjct: 244 ILGGLTSVPGAIIGGLIIGVGEKLSEVYLGPFVGGGIEIWFA---------YVLALVFLL 294

Query: 334 MRSHSLLRLR 343
            R   L   +
Sbjct: 295 FRPQGLFGEK 304


>gi|73541671|ref|YP_296191.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72119084|gb|AAZ61347.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 341

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 105/299 (35%), Gaps = 4/299 (1%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           ++ +    L L+ ++  L   L    +       +     +I  + + GL++V G + +L
Sbjct: 17  KVRRDWTPLALVPLLMLLAFPLVGSGSTWLTLTIAGLAMGMIIFVVSSGLTLVFGLMDVL 76

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI-- 124
           +       A+GAY    +       +        +   A  +   + +    G +     
Sbjct: 77  NFGHGAFIALGAYVAASVLLPLSGWVQADSLALNLAVFALAVFAAMAAAGAVGLFFERVV 136

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
              +  +  + ILI    +   +  I        +   V +  R         I +  + 
Sbjct: 137 VRPVYGQHLKQILITMGGMIVAEQLIRAIWGPETIALEVPAAFRGAVLLGDAAIEKYRLV 196

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            ++LG+     +++L L RT I    R   +N++   +L   +    +  F   +A  GM
Sbjct: 197 AMVLGLVV-FIAMLLLLNRTRIGLLIRAGVENREMVEALGYRVRRLFIGVFVAGAALAGM 255

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
            G  +   +  I+        N+++  ++I+GG+ S +       ++  +      +  
Sbjct: 256 GGVLWGLYQQNIT-AGIGAQVNVLIFIVIIIGGLGSTTGCFVGAVLVGLMANYTGFLFP 313


>gi|148259521|ref|YP_001233648.1| monosaccharide-transporting ATPase [Acidiphilium cryptum JF-5]
 gi|326402728|ref|YP_004282809.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|146401202|gb|ABQ29729.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Acidiphilium cryptum JF-5]
 gi|325049589|dbj|BAJ79927.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 336

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 96/323 (29%), Gaps = 27/323 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LRL     I  +LA++   +  L  G   +   I ++ +  +   + A   + V+   G 
Sbjct: 17  LRLPPETGIFVILALIMAGMEVL-TGNFLTIGNISTLLVNTITIGLLAVSETFVLLIGG- 74

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+   +  ++ +   L     I    +     G I G  +           
Sbjct: 75  IDLSVGAIQALSGVTAAVVINHTPLGWPGAILGGILAGALIGFINGSITHYINVPAFITT 134

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                                  G+  +  L         +                +  
Sbjct: 135 -------------------FATLGVAASIPLIVTQANPIPIFSNTFNALGQGYVLKIIPI 175

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            +L M  ++A+  + L RTA       +  N+ + +     I   ++  F +S    G+A
Sbjct: 176 GVLVMLVVAAAAHVVLSRTAFGVKVYAVGGNRHSAWLAGVNIARIEILCFTLSGTIAGLA 235

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCC 299
           G   AA      P     +     I+  ++GG+       S++       ++  + E   
Sbjct: 236 GVILAARLASGYPTAGSGASLFDGIASAVVGGVSLFGGSGSVAGALLGAIVIGTLTEGMD 295

Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322
            ++   +   L       +    
Sbjct: 296 VLDLNTYWQPLVIGIVILLAVML 318


>gi|253690596|ref|YP_003019786.1| inner-membrane translocator [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251757174|gb|ACT15250.1| inner-membrane translocator [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 322

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 91/302 (30%), Gaps = 23/302 (7%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           +        +   + ++  Q  +  + A G+++V+ + G + L+     A+   +     
Sbjct: 33  VSAMSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLALTG-AVAASI 90

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
               ++  + +  +  +    G   G+   K +      ATL+M  + + + + +   + 
Sbjct: 91  VGLEVNALVAVFGALALGALIGAGTGVIVSKGKVQAFI-ATLVMMLLLRGVTMVYTNGSP 149

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
              G                      F    +   + +   +  M  + A+    L  T 
Sbjct: 150 INTGFSDVA---------------DAFGWFGIGRPLGIPTPIWIMAIVFAAAWYMLHHTR 194

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +      +  N+ A      ++   K+  +++      +AG    A      P      E
Sbjct: 195 LGRYIYALGGNESATRLSGISVDKIKIIVYSLCGLLSALAGIIEVARLSSAQPTAGTGYE 254

Query: 266 NIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              + ++V     + GG   +        IL  +      +    +  ++       +  
Sbjct: 255 LDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAV 314

Query: 321 TT 322
             
Sbjct: 315 LV 316


>gi|118472054|ref|YP_887405.1| ribose transporter permease RbsC [Mycobacterium smegmatis str. MC2
           155]
 gi|118173341|gb|ABK74237.1| ribose transport system permease protein RbsC [Mycobacterium
           smegmatis str. MC2 155]
          Length = 333

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/317 (13%), Positives = 94/317 (29%), Gaps = 26/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +    +  +      + + + ++  Q  +  + A G+++V+ + G + L+     
Sbjct: 31  LLFIFIALFAVASVTAPQFLTSQNLANLLQQSSLTGIVAIGMTVVILTSG-IDLSVGSVA 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      IL         +  P++ +++   G+++G             A ++     Q
Sbjct: 90  ALSGMLVAILIGMG-----IAWPLAMVVAIMSGLVLGGIMGGLSAYLALPAFMVTLAGMQ 144

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           +I       TNG                                    +  V L     +
Sbjct: 145 SIRGLTFLTTNGTPTTAEIP---------------IGLRFLGAGSVAGIPVVGLIFVLTT 189

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + L LRRT        +  N KA       +     +A+ + S    + G    A   
Sbjct: 190 VIVGLVLRRTTFGEHVYAVGSNAKAARLSGLPVQRITTAAYVICSGLAALTGVLLTARLT 249

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++V     + GG   +     A  +L  +  L   +    F  +
Sbjct: 250 IGQPTANTGLELDAIAAVVLGGTSLFGGKGGVMGTFIAVLLLSVLRNLFNLLGLSSFFQM 309

Query: 310 LKFDCSFNMRHTTLMVI 326
           L              V+
Sbjct: 310 LVTGLILVAALIMNYVL 326


>gi|332284848|ref|YP_004416759.1| ABC-type transport system permease protein II [Pusillimonas sp.
           T7-7]
 gi|330428801|gb|AEC20135.1| ABC-type transport system permease protein II [Pusillimonas sp.
           T7-7]
          Length = 307

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/327 (15%), Positives = 119/327 (36%), Gaps = 28/327 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++  +  +     L A     ++ +  I  + Y + A G+S+++   G +S    +   I
Sbjct: 1   MIYAISIIGAVAALVAGYFTSWVITPIIIGITYAIAALGVSVMM-RAGQVSFGHAMYACI 59

Query: 77  GAYSYVILG-SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            AY+   L  +   L + +LI    +++ A  M++G+   ++RG +  +  L +S +   
Sbjct: 60  SAYTVAFLARAYPSLDVVVLILAGVLVAVAASMVIGVFVARYRGIFFGMLNLALSMVLFA 119

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L K   +T G  G+ +                          YE  +  + + +    A
Sbjct: 120 LLGKLYHLTGGTDGLRIERP------------TILGMELERAPYEFALLAITVFIALALA 167

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             I    R+    A   I+ N+     L  +        + +S+  +G +G+  A  +  
Sbjct: 168 WWIQRYFRSGDGEALAAIKTNETRLEYLGFSAYSVMWRGYLISAVVVGFSGSLLALIQGL 227

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           ++P++  +  +   + I ILGG   +        +   V  +                  
Sbjct: 228 VTPEIGLWLRSGEYVFIAILGGAGHVIGAFLGALVFEAVKLVSTAY-------------- 273

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRL 342
           F      ++ + L +VI +    ++  
Sbjct: 274 FPGLWQFILGLTLIIVIFLFPRGIVGE 300


>gi|220920118|ref|YP_002495419.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219944724|gb|ACL55116.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 308

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 65/326 (19%), Positives = 116/326 (35%), Gaps = 37/326 (11%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  +    L    +       Y+  +      + +F+    ++ G  G ++        +
Sbjct: 10  LFWLSLVGLALASVLPLWVSGYVLGLLTIAYYFGVFSMAWDLLFGFAGEVNFGPTFLIGL 69

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAYS  IL         L +   A+ +   G+++ LP+L+ RG Y  + T++   I QN 
Sbjct: 70  GAYSAGILNGHGVSIP-LCLAAGAVAAVIGGLVLALPALRVRGPYFGLTTVVAVLILQNF 128

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           ++ +   T G+ G+ V D +                     +     Y++ LG   +S  
Sbjct: 129 IVVFAETTGGEIGLTVPDVIS--------------------VDAATNYWIALGFMTVSGL 168

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           I+  +  + +    +    +     +L   +   KL+AF VS+ F G+AGA         
Sbjct: 169 ILFAIAASPVGLILQASGQDPVEAGALGFNVAKHKLAAFCVSAFFSGLAGALLVFYMGTA 228

Query: 257 SPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           S       S  + VI   +LGG  ++         LI   EL   +              
Sbjct: 229 SVGTLVDVSVGVQVIIGAVLGGRRTILGGVLGAVFLIAAGELLRPL-------------- 274

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLR 341
                T ++  A   VIL     LL 
Sbjct: 275 -GSLSTFVVSAAALAVILFVPAGLLG 299


>gi|121609006|ref|YP_996813.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121553646|gb|ABM57795.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 342

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 86/313 (27%), Gaps = 26/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +   V  ++L +   +  +     ++  Q  I  + A G++ V+     + L+     
Sbjct: 43  IFIAFAVLCVVLGIAQESFLTWGNWVNVLRQTSINAILAIGMTCVI-LTRGIDLSVGSLL 101

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A          S   +S+ L +          GM+ G    +       +   ++S    
Sbjct: 102 AFSGLVAASFVSGDNVSLALALAGGLGAGLLLGMLNGALVARLSVQPFVVTLGMLSVARG 161

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              I    +                            F          +   +L +    
Sbjct: 162 LTFIYNDGMPIAGLAPS--------------------FRFIGQGMIGGLPVPVLILAATF 201

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L+ TA       +  N+K+  +      +     +A+S     +AG   AA   
Sbjct: 202 GLFWFVLKYTAFGRYIYAVGGNEKSARTSGIRTKWVIFWVYAISGLLSALAGIILAARTT 261

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG+ +LS       I+  +      +    +   
Sbjct: 262 SALPQAGVAYELDAIAAVVIGGTSLSGGVGTLSGTLVGALIIGVINNGLDLLGVSSYYQQ 321

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 322 VIKGVIIVVAVLL 334


>gi|332530621|ref|ZP_08406554.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
 gi|332039904|gb|EGI76297.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
          Length = 292

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 101/305 (33%), Gaps = 21/305 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       ++  + A GLS+ +G +  ++L       +G Y  VIL  R+G+   L +P+
Sbjct: 5   LFDGIAYGMLLFILAVGLSVTMGLMNFINLAHGAFAMVGGYLTVILMQRHGVPFLLCLPL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + S   G ++     +       +  ++ S     + +         +   V      
Sbjct: 65  AFLGSALLGALLERTLYRPMYSKPHLNQVLFSIGLTFMAVAVMDYFFTSSQQIVQLP--- 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               ++         +  +    +  +++     L+ ++   L RT   +  R   D+Q+
Sbjct: 122 --EWLKGRTELGSGTAWELGMGHYRLFIVAVCLALTIALQTILSRTRFGSRLRASVDDQR 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +    L  FA  S   G+ GA  A     I    F     +  + +V +GG 
Sbjct: 180 VAAGLGINVNAVFLLTFAAGSGLAGLGGALGAEIL--ILDPSFPLRYMVYFLIVVAVGGT 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S++                         + +            ++   + ++++ R   
Sbjct: 238 SSITGP--------------LLAALLLGIADVAGKYYIPRFGAFIVYFLMIVILIWRPQG 283

Query: 339 LLRLR 343
           L   +
Sbjct: 284 LFVRK 288


>gi|312141173|ref|YP_004008509.1| branched-chain amino acid ABC transporter transmembrane protein
           [Rhodococcus equi 103S]
 gi|311890512|emb|CBH49830.1| putative branched-chain amino acid ABC transporter integral
           membrane subunit [Rhodococcus equi 103S]
          Length = 291

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 86/311 (27%), Gaps = 23/311 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
               +   +       + + A G+ +VV      +          A +   +   +G+ +
Sbjct: 1   MTDPQLWLAALEIGAFFSLIALGMYLVVVGADFFNFAMGPYAMAAAMACSFVVVDHGVPL 60

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           WL + +   +  A  +I     ++          L        +L   + +     G   
Sbjct: 61  WLALLLGLAVGMALSVITEKLVVQQVQKRSGRGELPALVAVTAVLFAVQQLAGTIFGRTP 120

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                           F     +    +     +++G   +   + LWL+ T      R 
Sbjct: 121 LPGQKLFD--------FQPITVAGATVDSSSIVLVVGTVVVFVVVGLWLQATQTGRLLRA 172

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           + DN +A   L   +   +L AF V+     +AG  FA             S  +     
Sbjct: 173 VGDNPEAARILGLPVNRVRLVAFTVAGLIAAIAGLLFAPKAGV--QFTSGLSWTLTAFIA 230

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           +++GG            +L  V                           T +++   +  
Sbjct: 231 LVIGGTGRSWAPLIGGLLLGFVQVFAPYYFGA-------------SAAQTAILLIALVFF 277

Query: 333 LMRSHSLLRLR 343
             R   LL  +
Sbjct: 278 AFRPEGLLSRK 288


>gi|251796412|ref|YP_003011143.1| inner-membrane translocator [Paenibacillus sp. JDR-2]
 gi|247544038|gb|ACT01057.1| inner-membrane translocator [Paenibacillus sp. JDR-2]
          Length = 329

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/315 (13%), Positives = 100/315 (31%), Gaps = 13/315 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L+  +  L   ++     +   +  +   I I    A G++  +   G   L+     +
Sbjct: 15  LLVIALVILFFSMWDEHFFTYANLSDILRSISITTFVAIGVTFSLTVDG-FDLSVGSTVS 73

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +           Y   + ++I V+ +I    G++  L  +K R     +ATL +  I   
Sbjct: 74  LTTVVTAAFMVWYEQPVVVVIIVALLIGALVGLLNALLIVKIRI-PDMLATLAVMYIVGG 132

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I   +    +    + + D     G    S +   +     +   + +  + +       
Sbjct: 133 IHKTYTKGYSIYNNMPMPDGSTAPGKFSESFLWLGQGKLLGIPVPVVLMIIAV------I 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           ++ L+ + T       T   N++A       +   +  A+  S  F  + G  +AA    
Sbjct: 187 AVHLFFKYTRWGRQMYTTGGNEEAARLSGVRVRRIRTFAYVASGIFAAIGGILYAARVGT 246

Query: 256 ISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
              D         V ++     V+  G  ++        ++  ++     M   Y+ + +
Sbjct: 247 GQIDAGAPMMMESVAAVFIGYSVLGAGRPNVIGTFFGAILIGVLLNGMTMMKVQYYANDI 306

Query: 311 KFDCSFNMRHTTLMV 325
                  +      +
Sbjct: 307 VKGVVLVLALAVTFI 321


>gi|154503215|ref|ZP_02040275.1| hypothetical protein RUMGNA_01039 [Ruminococcus gnavus ATCC 29149]
 gi|153796209|gb|EDN78629.1| hypothetical protein RUMGNA_01039 [Ruminococcus gnavus ATCC 29149]
          Length = 424

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/338 (13%), Positives = 104/338 (30%), Gaps = 44/338 (13%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILI-----YVMFAWGLSIVVG 61
           +++++     ++ V   +L+ L L  +++  Y     IQ +I           G+  ++ 
Sbjct: 22  KISRFLVSWEMVLVYILILINLVLMISRTNLYFSQGTIQSIIQSGMDVCPLVLGMIFIL- 80

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
            LG + ++        + +  +  S    +      ++ + +GA         + + G  
Sbjct: 81  MLGDIDVSVASIMIFSSMATGLCCSAGLPAF--AGVIAGIAAGALCGAFNGFLIAYVGMP 138

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
             I T+  S +F+              GI        +     S      + +   I   
Sbjct: 139 AVIVTIASSMLFR--------------GIVKIILDVNVLKEFPSFYTSVAWTNILGIPIA 184

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            + +  +   F+         ++        I +N          +   K++ F +    
Sbjct: 185 LLLFFAMASVFVFVL-----HKSKFGRKLYIIGNNPTCAQYSGIDVKKTKMTVFILMGVM 239

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVV 295
            G+A  FF                 +  I+I +LGG+        +     AT I+  + 
Sbjct: 240 CGIASIFFVGRMGGSVSSTMGTGYEMTAIAICVLGGVSTNGGKGKVYGPVIATLIMAFLT 299

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
                +           D   N R     +I +  V++
Sbjct: 300 YTLGLL-----------DVDANTRKIVTGLILIIAVLI 326


>gi|148256980|ref|YP_001241565.1| putative high-affinity branched-chain amino acid transport system
           permease [Bradyrhizobium sp. BTAi1]
 gi|146409153|gb|ABQ37659.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 289

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 97/306 (31%), Gaps = 26/306 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             +       ++  + A GL++ +G +  ++L        G Y   +L +R G   +  +
Sbjct: 6   TNLFDGVAYGMLLFVLACGLAVTLGLMNFVNLAHGAFAMAGGYVCAVLVNRVGWPFFAAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++ + S   G ++     +       +  ++ S     + +       G +        
Sbjct: 66  PLAFVASAVIGALLERTLYQHLYARSHLDQVLFSIGLVFMTVATVDYIMGSS-------- 117

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     I   +F    V    +   +++    L+  + L L +T   +  R   D+
Sbjct: 118 --RIFIKLPEILQGQFDIFGVGIGRYRLMIIVICGLLTVGLQLVLSKTRFGSRLRAAVDD 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   L   +       FA      G+ GA  A          F     I  + +V +G
Sbjct: 176 PRAASGLGINVPQVFAFTFAFGCGLAGLGGALSAEILGL--DPYFPLKFMIYFLIVVTVG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G +S++    A+ +L                               ++   + ++++ R 
Sbjct: 234 GSSSITGPFLASLLLGVADVAGKYYVPKLGP--------------FVIYTIMIVILIWRP 279

Query: 337 HSLLRL 342
           + L   
Sbjct: 280 NGLFGR 285


>gi|328544742|ref|YP_004304851.1| ABC transporter permease II ( substrates branched-chain/neutral
           amino acids) 2 [polymorphum gilvum SL003B-26A1]
 gi|326414484|gb|ADZ71547.1| ABC-type transport system permease protein II (Probable substrates
           branched-chain/neutral amino acids) 2 [Polymorphum
           gilvum SL003B-26A1]
          Length = 317

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 63/324 (19%), Positives = 123/324 (37%), Gaps = 39/324 (12%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +A V  + L L L       Y   + I +  YV  A   ++  G    +SL  V  + IG
Sbjct: 7   IAAVAAVFLALALAPFHLGTYGVGLLIGLTGYVTLASAWALFSGPTRFVSLATVAFFGIG 66

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           AY+  +      L   L++ V+ +I     +++GL +L+  G Y  I T  ++E+ + ++
Sbjct: 67  AYTTAV--LYEVLPPVLVLAVAGLIGFIVALVVGLSTLRLAGVYFVIFTFGLAELVRQLV 124

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
             ++    G  G Y                               +Y+ LL +C ++  +
Sbjct: 125 TWYEVNVTGTLGRY----------------------LFVDFGPEVVYWQLLALCAVTIGL 162

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              ++R+ +  A + I D++             KL+ FAVSS  I + GA  A     I 
Sbjct: 163 SFLIQRSRLGLALKMIGDDEVVAEHCGLPTARVKLALFAVSSVIITLVGAIQAPRWTYIE 222

Query: 258 PD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           P  +F  + + + + + +LGG   L         L  + E                  +F
Sbjct: 223 PTIVFNPTISFLTLIMALLGGAGRLWGPVVGAVPLFLLFEWLSA--------------NF 268

Query: 317 NMRHTTLMVIALFLVILMRSHSLL 340
              ++ ++ +    ++ +    +L
Sbjct: 269 PNHYSIILGLLFMAIVFVLPRGVL 292


>gi|328949178|ref|YP_004366515.1| ABC-type transporter, integral membrane subunit [Treponema
           succinifaciens DSM 2489]
 gi|328449502|gb|AEB15218.1| ABC-type transporter, integral membrane subunit [Treponema
           succinifaciens DSM 2489]
          Length = 349

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 95/319 (29%), Gaps = 11/319 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + + A +Y L +       +  +   ++  +    ++ +  LS+V+   G + ++     
Sbjct: 31  ISVFAAMYLLAVIFLGAGFRKPQTFLNLLNENASLIVLSCALSLVM-ITGGIDISVGTVT 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      +   + G +I   +  + +I  + G++ G            ++   M     
Sbjct: 90  ALVCMCCAVHLDKNGGTIAGAVIYALVIGVSFGLVQGFLVAFLDIQPFIVSLAGMF---- 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                   I N        +    L  T   +               ++   +L    + 
Sbjct: 146 -FAKGMTTIVNATQFNVKHEGFVKLIETRIYVPGMGSVNKVGKYIPAYVEPGVLIALLVV 204

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + L LR T +   +  +  NQ++   L   +   K  A  + S    + G  +     
Sbjct: 205 VILFLVLRWTKLGRNFYAVGGNQQSANMLGINVKMTKFLAHFICSVLAAVGGFVYFMHVG 264

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             SP      E   + S +I      GG+ +++        L  +  +   +        
Sbjct: 265 SASPSHASGYEMNAIASSIIGGTMLTGGVGNIAGTFFGVLSLATIKNIVSSLGLDDAWWT 324

Query: 310 LKFDCSFNMRHTTLMVIAL 328
                        +  + L
Sbjct: 325 NITVAFMICLFLLIQSVVL 343


>gi|320010755|gb|ADW05605.1| inner-membrane translocator [Streptomyces flavogriseus ATCC 33331]
          Length = 350

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 105/328 (32%), Gaps = 27/328 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           ++D  + +L V   ++         S + +      I    + A  ++++V   G + L+
Sbjct: 28  RWDTAVGVLLVAVLVVGLGTTEGFGSAENLAFAFNDIAEVAIIALPMTLLV-VAGQVDLS 86

Query: 70  CVIAYAIG-AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                 +G A +  +  + +     + + +   ++G       +  +      + I TL 
Sbjct: 87  VASMLGLGSALTGALWEAGWAFETIVPVVLLGGVAGGLLNGWLVTRVGLPSLAVTIGTLA 146

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +     ++++    +T+                     +       +  +   F+ Y +L
Sbjct: 147 LYRGLASVVLGSDAVTDFPQ------------------VYADWAVDTTTVPGTFLTYPVL 188

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
               L+A   + L  T    +   I   ++A +     +   KL  F  +  F   AG  
Sbjct: 189 LFIVLAAVTAVVLHATGPGRSLFAIGSQEEAAYFAGIRVKRIKLLLFVATGLFSAFAGVL 248

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMN 302
           F                 ++VI+ V+LGG+       +L        ++  +  L    +
Sbjct: 249 FTLRYGSA-RADNGLGFEMLVIASVLLGGIDFDGGKGTLFGAVAGVLLIGVLKNLLTLND 307

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFL 330
                 ++           T  VIA  +
Sbjct: 308 IANEVQVIVTGLLLVASVLTPRVIAAVV 335


>gi|229492973|ref|ZP_04386768.1| ABC amino acid transporter, permease component [Rhodococcus
           erythropolis SK121]
 gi|229320003|gb|EEN85829.1| ABC amino acid transporter, permease component [Rhodococcus
           erythropolis SK121]
          Length = 285

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/299 (12%), Positives = 87/299 (29%), Gaps = 28/299 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                +YV+ A G ++V  S    +        +G +          L + ++  ++ + 
Sbjct: 8   LALGAVYVLVAIGYNVVFVSSNTFNFAQAQLMMVGTFVAYTGLVTLKLPVLVVAVMATVT 67

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 +  + +   R        L+ +     +L     +  G   + V         T
Sbjct: 68  VMLLASVEEIVA--IRPVADHQNQLVTTLGVATLLNGATQLIWGSEPLTVPFFGSNEPIT 125

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +     +                +L+    L   +    ++T    A   I ++++A   
Sbjct: 126 LLGGRTYP-----------VEIALLVAAIALVVGLSYVSKKTMTGLALIGISEDREAAML 174

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
               +    L AFA S A  G+ G F       +       +  +     + +GG  SL 
Sbjct: 175 RGVNVRRLALGAFAFSGALAGVLGLFVGPKTFAV--ATLGAALALKGFVALAIGGFGSLP 232

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +  V           ++++  F               L ++++++   L  
Sbjct: 233 GALIGGLTVGLVESFTALWAGSQYSNIAVFT-------------VLIVILMVKPAGLFG 278


>gi|218674438|ref|ZP_03524107.1| ribose ABC transporter, ATP-binding protein [Rhizobium etli GR56]
          Length = 842

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/336 (10%), Positives = 91/336 (27%), Gaps = 39/336 (11%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLS-IVVGSLG 64
           +  ++   +   L +V  + + L      +   +    +     ++ A  L+ IV+   G
Sbjct: 528 ITQDRSLFVPAGLFIVLLVAVALRGHGLFTNNGLAGAILVATPLILTALALTPIVMAGRG 587

Query: 65  LLSLNCVIAYAIGAYSYVIL-GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
            + L+          + +         +   +I  +  +  A  ++  L  +  R   + 
Sbjct: 588 AVDLSVGPLMGFINVTLITWLVGNGITNPIAVIVWAVGLGAAFQLLQALVIIYVRVAPII 647

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           +       +   + +       G A  ++             L+      + +++     
Sbjct: 648 VTLSGF-LVLSGLNLMVMSRPGGVAPDWMLSWGAGTDIMSPVLLLLVAAYALWLLL---- 702

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
                             R T      R    +++  ++    +   ++ A  V  AF G
Sbjct: 703 ------------------RGTMFYRNLRMTGADERMAYTSGVRVDAVRIIAHVVGGAFAG 744

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +A   + A      P          V ++V+      GG             +  +  L 
Sbjct: 745 LAALSYTALISSGDPTQGSTYTLQAVTALVLGGASLSGGRGGALGSTLGAINMFLISYLL 804

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
              N         F             + L   +L+
Sbjct: 805 STFN---------FGTVSGFVTQMAFGLILVGSLLV 831


>gi|260427266|ref|ZP_05781245.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Citreicella sp. SE45]
 gi|260421758|gb|EEX15009.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Citreicella sp. SE45]
          Length = 289

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/301 (10%), Positives = 87/301 (28%), Gaps = 26/301 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
             Q +IY + A  L++V  S  +++         GA+   +L    G++      ++ + 
Sbjct: 10  LSQGMIYALIALSLTVVYRSTTVVNFGHGDFVMAGAFLSYVLVVLAGVAFLPAAALAMIA 69

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G++     ++       I   +M      +L     +  G+  + +          
Sbjct: 70  MFVLGVMFNRGLIRPILGGPHIGLALMCIAAGYVLRGLARMVWGREVLPMPPVFDMDPIF 129

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           V             ++      +++  +  L       +  T +    + +  + +    
Sbjct: 130 V-----------GDLVITGDAVFIIGTVLVLLLLFFGLMAMTDLGKMVQAVYQSPRGARL 178

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +      ++ + +A   + G   A     +       S  I   + + LGG  SL 
Sbjct: 179 IGLNVDRFNDFSWGIGAALGALGGILVAPV--SLLHPDLGASFLIKGFAAMTLGGFGSLG 236

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  +L    +            +                + +  V+ +R   L   
Sbjct: 237 GAVLGGVLLGLAEQYAGAYIDSALIEITA-------------YVVIVAVLFIRPQGLFGR 283

Query: 343 R 343
           +
Sbjct: 284 K 284


>gi|271501424|ref|YP_003334449.1| inner-membrane translocator [Dickeya dadantii Ech586]
 gi|270344979|gb|ACZ77744.1| inner-membrane translocator [Dickeya dadantii Ech586]
          Length = 297

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 89/304 (29%), Gaps = 16/304 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++    I+     + A GLS+V G +   ++  +    +G++               ++
Sbjct: 3   QFLIDTLIRTADLSLVALGLSLVYGLVRFANIAHMQYAMVGSFITAAGLRLGMPLSMAIV 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + +      M+             A A +    +   ++     +       Y     
Sbjct: 63  FSAMVCGMLSMMLHHWVYQPLLKRGTANAMIGSLAVSMVLIALVLGVEGSAPVNYSLPVG 122

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
             L      +     +     I  + M+ +LL              RT    A R +  N
Sbjct: 123 ELLLVGDTRISTDELWSLGVTISLVVMFSLLLF-------------RTPQGRAIRALASN 169

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +    +          +   V+     + G+  A +              + V++  ILG
Sbjct: 170 RDLAAASGLNASAIIHNVNLVAGMLAAVGGSMLAMNASA--WVNQGNDLMLPVLAAAILG 227

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +         ++     L   +++ +              + +   + L L +L+R 
Sbjct: 228 GLGNPMGAIFGALLIAATETLVTNIDWSWLFGGDLLFIPVTWVNASSF-VILLLALLLRP 286

Query: 337 HSLL 340
           + L 
Sbjct: 287 YGLF 290


>gi|212636245|ref|YP_002312770.1| branched-chain amino acid AbC transporter permease [Shewanella
           piezotolerans WP3]
 gi|212557729|gb|ACJ30183.1| Branched-chain amino acid ABC transporter, permease protein,
           putative [Shewanella piezotolerans WP3]
          Length = 297

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 91/306 (29%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  I  L+Y +      +V  S  +++        +GA+    L     L  +L   +
Sbjct: 10  IINGLIVGLLYGVVGMCFVLVYKSTQIVNFAQGEFLLVGAWVCWALLVYLQLPFFLGFLL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G+ + +  L+       I+ ++++               G +          
Sbjct: 70  TLCFMAVFGVFLQMIVLRPMIGEPIISVIMVTIGLSIFFQSLTKWIFGVSPQSYP----- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 ++          +  E+      +    +  S  L+ + +    A R    +Q+
Sbjct: 125 ------TVFDTQSISIFGLNIELAYLMSTVIALIIMVSFFLFFKYSKHGLAMRATAFDQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  ++      ++ +++     AG                 S  I V   VILGG+
Sbjct: 179 VAQSLGISVKQVFAMSWGIAATVSATAGVVIGMVNGVSDSLS---SIGIKVFPAVILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +  +  +    +  Y +            +       L +++  + + 
Sbjct: 236 DSIVGAIVGGITIGILENVAEFFDSQYLH--------IGNMYDIAPFYVLLIILWFKPYG 287

Query: 339 LLRLRT 344
           L   R 
Sbjct: 288 LFGTRD 293


>gi|148656844|ref|YP_001277049.1| monosaccharide-transporting ATPase [Roseiflexus sp. RS-1]
 gi|148568954|gb|ABQ91099.1| Monosaccharide-transporting ATPase [Roseiflexus sp. RS-1]
          Length = 340

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/329 (13%), Positives = 102/329 (31%), Gaps = 19/329 (5%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLF-LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
           +R  +  ++  ++ +V  LL+F + +    S +  + +   + I  M A G ++VV    
Sbjct: 8   IRPEQIRELSLVVLIVAALLIFAWQIENFLSARTFNRIAGSVAIIGMVAIGQTLVV-LTR 66

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+        AY      +       L     A   G    ++    + +      I
Sbjct: 67  NIDLSVGSIVGFTAYFVGAQLAANNDMWPLAAVALAAAVGGAMGLVNGLIVAYGRAPAII 126

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL    I++ +LI              ++       ++   +      + F+I +  + 
Sbjct: 127 TTLGTLAIYRMLLIN------------YSNARTVTVDSLPPWVVELSRQNLFMIGDFAVR 174

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            +++          L L  T        I  N +A            L+AF +     G+
Sbjct: 175 PLIVATLVTVVVFQLVLGYTVFGRRLYAIGSNPEAARFAGLPAQRIVLTAFTLCGMLAGL 234

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
           AG  F A    I+    +  E   V ++V+      GG  ++        ++  + +   
Sbjct: 235 AGFLFLARFGNITAVAGQGIELESVAAVVVGGVNTFGGSGTVFGALLGAFLIDLLGQGLL 294

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
                             +       + +
Sbjct: 295 RWLGISEFWRDALLGLLILLAVASDAVIM 323


>gi|152965426|ref|YP_001361210.1| Monosaccharide-transporting ATPase [Kineococcus radiotolerans
           SRS30216]
 gi|151359943|gb|ABS02946.1| Monosaccharide-transporting ATPase [Kineococcus radiotolerans
           SRS30216]
          Length = 333

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 96/317 (30%), Gaps = 26/317 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
             + + ++ ++             S + + ++ I    + + A G ++V+   G + L+ 
Sbjct: 29  IRRAMLIVMLLVIAFFSYRSLRFSSPENLQNILIAAAPFALIALGQTLVI-LTGGIDLSV 87

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A+   +   +       +WL +  +  +    G + G+   +           I +
Sbjct: 88  GSVIAVAGMTSAAVAKANPGQVWLTVLSAMAVGLLAGTVNGILVSRIDVPPF-----IAT 142

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                       +  G A I                     F S      + +   ++ M
Sbjct: 143 LGMLTAGSGIAYVIGGGAPINGLPAE---------------FGSIANTKVLGLQIPVIVM 187

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 + + +RRTA       +  N+ A             S +AVS    G++G   A
Sbjct: 188 IVGIVLLGIVMRRTAYGMRVYAVGGNRVAAEIAGVNARRTLFSVYAVSGLLAGLSGVMLA 247

Query: 251 ASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           +      P++ +  E   + ++VI     +GG  ++   A    ++  +      +    
Sbjct: 248 SRVISGPPNLGQGYELDAIAAVVIGGASLMGGRGTVWGTALGLLLIQTLNNGLDLLLVPA 307

Query: 306 FNSLLKFDCSFNMRHTT 322
           +   +            
Sbjct: 308 YWQDVIKGVLIVAAVAV 324


>gi|306841575|ref|ZP_07474273.1| ribose ABC transporter permease [Brucella sp. BO2]
 gi|306846078|ref|ZP_07478640.1| ribose ABC transporter permease [Brucella sp. BO1]
 gi|306273329|gb|EFM55190.1| ribose ABC transporter permease [Brucella sp. BO1]
 gi|306288412|gb|EFM59771.1| ribose ABC transporter permease [Brucella sp. BO2]
          Length = 346

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/313 (10%), Positives = 85/313 (27%), Gaps = 10/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +    +         +      M   + I+ + A G+ ++V   G + L+     
Sbjct: 31  AFFALIAIIAVFSFLSPYYFTVDNFLIMSSHVAIFGLLAIGM-LLVILNGGIDLSVGSTL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       L     L  + +I    + +           +      +    +    +  
Sbjct: 90  GLAGVVAGFLMQGVTLQEFGIILYFPVWAVVLITCALGAFVG----AVNGVLIAYLRVPA 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +             + + + L +     R  +    F          +   +L +  L+
Sbjct: 146 FVATLGVLYCARGVALLMTNGLTYNNLGGRPELGNTGFDWLGFNKLFGVPIGVLVLAVLA 205

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L RTA          N++A       +   K+S + +S     +AG   ++   
Sbjct: 206 IICAIVLNRTAFGRWLYASGGNERAAELSGVPVKRVKVSVYVISGICAAIAGLVLSSQLT 265

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG  ++        ++  + +    +    +   
Sbjct: 266 SAGPTAGTTYELTAIAAVVIGGAALTGGRGTIQGTLLGAFVIGFLSDGLVIIGVSSYWQT 325

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 326 VFTGAVIVLAVLL 338


>gi|298241070|ref|ZP_06964877.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963]
 gi|297554124|gb|EFH87988.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963]
          Length = 292

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 102/300 (34%), Gaps = 26/300 (8%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
              +Y + A GL++V G + ++++       +GAY   +L  +  + ++L + ++     
Sbjct: 15  TGGVYALMASGLTLVFGVMDIINIGQGALVILGAYLSYVLEQQLHIDLFLGLLITMPCLF 74

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
             G+++    ++       + +++++     I+     +                   + 
Sbjct: 75  LLGIVLEWLFIRPIKRDRTMLSILVTFGIALIIEGILNLLFSAD-----------YVQLH 123

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           +      F            +  L    L  ++ L L RT    + R   +N+ A   + 
Sbjct: 124 AWYVTASFRIGNFYLSYIYVFGFLLAVLLLGALYLLLYRTRFGRSMRAAMENRTAAELIG 183

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
             + +  +  F +  +     G  F A+    +   +     +  ++I+I GGM SL+  
Sbjct: 184 IDVEYVSMITFGIGISLAAAGGMAFGATNTFNAGSAYDLISRL--LAIIIFGGMGSLTGA 241

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             A+  ++ + ++        + + + F     +                R   L   R 
Sbjct: 242 LAASVGMLVIEDVTAVTWSPVWANTVFFLLLVLILVL-------------RPQGLFGRRE 288


>gi|15642887|ref|NP_227928.1| sugar ABC transporter, permease protein [Thermotoga maritima MSB8]
 gi|4980603|gb|AAD35206.1|AE001697_6 sugar ABC transporter, permease protein [Thermotoga maritima MSB8]
          Length = 317

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 90/297 (30%), Gaps = 27/297 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL-LSLNCVIAY 74
            +  V   +   +      +   + ++G QI I+ + A G + V+ S G  + L+     
Sbjct: 16  LVALVSLAVFTAILNPRFLTAFNLQALGRQIAIFGLLAIGETFVIISGGGAIDLSPGSMV 75

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       L +     +W+ + +  + S   G   GL   K R                
Sbjct: 76  ALTGVMVAWLMTHGVP-VWISVILILLFSIGAGAWHGLFVTKLRVP-------AFIITLG 127

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + I          G  +           +        P             +  +  ++
Sbjct: 128 TLTIARGMAAVITKGWPIIGLPSSFLKIGQGEFLKIPIP-------------VWILLAVA 174

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                +LR+T      R    N+ A       +   ++ AF VS    G+ G   AA   
Sbjct: 175 LVADFFLRKTVYGKHLRASGGNEVAARFSGVNVDRVRMIAFMVSGFLAGVVGIIIAARLS 234

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +  P +    E   + S VI      GG  S+       +I+  +      +N   +
Sbjct: 235 QGQPGVGSMYELYAIASTVIGGTSLTGGEGSVLGAIVGASIISLLWNALVLLNVSTY 291


>gi|317126142|ref|YP_004100254.1| inner-membrane translocator [Intrasporangium calvum DSM 43043]
 gi|315590230|gb|ADU49527.1| inner-membrane translocator [Intrasporangium calvum DSM 43043]
          Length = 291

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 52/287 (18%), Positives = 96/287 (33%), Gaps = 11/287 (3%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            S  +    Y   A+GL ++ G L +++L         AY   +L + + +  ++  P+ 
Sbjct: 9   VSAVLLAGFYASMAYGLGLIYGVLRVVNLAHGGMIMASAYVSWLLFTHFNIDPYVAAPLV 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +     G+ +    ++F     A     +  +F   L+         +G   A R  + 
Sbjct: 69  MIAFFFVGVGVYKGLVRFLPRGAAGGVQSLLLLFGVWLVIRNIAYLLFSGDDQAVRTSYS 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
             +V               + +    V L      A + LWL RT    A R + +N  +
Sbjct: 129 TASVS---------ILGSQFSVNRVVVFLISLVAVALLQLWLSRTYTGKAVRAVAENPGS 179

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                  +       F V +A  G+AG    AS        F   E +    I++LGG+ 
Sbjct: 180 STLAGIDVERVYALTFGVGTALAGLAGVL--ASTLFAFNPSFGSGELLKSFVIIVLGGLG 237

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           S+  I     IL         +   Y  + + F     +       +
Sbjct: 238 SVVGIGLGALILAFAEVFAIYIVPSYLTAAVGFVLLVVVLVVRPAGL 284


>gi|294787435|ref|ZP_06752688.1| ribose ABC transporter, permease protein [Parascardovia denticolens
           F0305]
 gi|315226996|ref|ZP_07868783.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Parascardovia denticolens DSM 10105]
 gi|294484791|gb|EFG32426.1| ribose ABC transporter, permease protein [Parascardovia denticolens
           F0305]
 gi|315119446|gb|EFT82579.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Parascardovia denticolens DSM 10105]
          Length = 326

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 89/301 (29%), Gaps = 28/301 (9%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
                A  +   + ++GIQ     + A+G +  + + G + L+     A  +      G+
Sbjct: 39  AFATPAFLTGANLLNVGIQASTIAILAFGETFAIVAAG-IDLSVGAVAAFSSMVVAYTGA 97

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+  WL + V  +     G + G+ +   +                            
Sbjct: 98  SLGMPAWLTVIVGVLAGAFFGALSGIANAFLKLPSFI----------------------A 135

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                   R   L  +    I      + F    + +   ++ M  +     + L  T+I
Sbjct: 136 TLATMSIARGLTLVISDGRPISTSGLVNFFGSTVLGIPVPIVTMIIMGVIAAVILNFTSI 195

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             +   +  N +A       +   ++  F +S  F  +AG   A     + P      E 
Sbjct: 196 GRSIYAVGGNMEASRLSGIHVHKTQIIVFVLSGIFAAVAGLVIAGRLHSVQPQAASGYEM 255

Query: 267 IIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             + S VI      GG   +S       +L  +      +N   F   +       +  +
Sbjct: 256 DAIASTVIGGASLSGGKGKISGTFVGAILLAVIRNGLNILNVSSFWQQVVIGLVIAIAVS 315

Query: 322 T 322
            
Sbjct: 316 I 316


>gi|295680805|ref|YP_003609379.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295440700|gb|ADG19868.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 328

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 94/322 (29%), Gaps = 24/322 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R++K   I     V   L+  +F  +  S +YI           + A GL +V+  LG +
Sbjct: 19  RIDKPIVIAFACIVALLLVGGMFSRSFTSPEYILLQLKVGAFLGIIATGLMMVI-LLGHI 77

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+      +GA     +     L   L IPV        G++ G+     R   +    
Sbjct: 78  DLSLPWTITVGAMMACAVAGHGELGQILAIPVGIGCGVLIGVVNGILVALLRIPSMI--- 134

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
                            TN  A   +            +        + +++  +     
Sbjct: 135 -------------ATLATNAVAQGIMIVYTGGSSPQDSAPQVMRWLAAGWLVPGVPNAVA 181

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           L  +   +   +L   RT        I + ++A +          ++AFAV S F    G
Sbjct: 182 LWVVIGGATVFLL--SRTTFGRTLYAIGNTERAAYLSGINTRLVTVAAFAVCSGFAAFGG 239

Query: 247 AFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
              A    + +  M        + ++V     ILGG  S         ++  +  +    
Sbjct: 240 VLLAGYASKAAQSMGDAYLLPAIAAVVLGGTSILGGRGSYLGTVAGAILITLLQSILSVA 299

Query: 302 NFYYFNSLLKFDCSFNMRHTTL 323
                   + +           
Sbjct: 300 QMPEAGRQIIYGVVIAAMLLLY 321


>gi|238790307|ref|ZP_04634080.1| Inner-membrane translocator [Yersinia frederiksenii ATCC 33641]
 gi|238721571|gb|EEQ13238.1| Inner-membrane translocator [Yersinia frederiksenii ATCC 33641]
          Length = 323

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/321 (12%), Positives = 94/321 (29%), Gaps = 27/321 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           + N  D    +  ++  +   L      +   + ++  Q  I  + A G+++V+   G +
Sbjct: 18  KFNLRDAGTLIGLLIIVVTFSLLTPGFLTVPNLLNILQQSSINGIIALGMTLVI-ISGGI 76

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+ A     L          ++    + +        L +            
Sbjct: 77  DLSVGPTAALSAVLGATLMVAGVPIPLAVMATLGVGALCGVFSGTLIA------------ 124

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
                     L  +     G +       ++  G  V  +   FR   +  I+ +    +
Sbjct: 125 -------YAGLQPFIVTLGGLSLFRAMALIFTNGNPVFGIPMEFRNFINSEIFGVPSPII 177

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           ++    +   +++   +T +      +  N++A       +   K++ F +S     +A 
Sbjct: 178 IVVTLAVILWVVMN--KTPLGEYILAVGGNEEAARVAGVPVKRTKVTVFVISGLLASLAS 235

Query: 247 AFFAASRDRISPDMFKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
                      P M    E        +    ++GG  S+        IL  +      +
Sbjct: 236 LILIGRLGAAEPTMGNLWELDAIAAAAIGGASLMGGKGSIIGTLVGAIILGSLRNGLTLL 295

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
           N   F  LL       +    
Sbjct: 296 NIQAFYQLLATGLIIIIAMLI 316


>gi|254462335|ref|ZP_05075751.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2083]
 gi|206678924|gb|EDZ43411.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 285

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 96/295 (32%), Gaps = 26/295 (8%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG- 107
           Y M A GL+++   + +L+      Y IG +       ++G+   L + +S +     G 
Sbjct: 11  YAMIALGLTLIFALMNVLNFAHGQMYVIGGFVTYTFYGQWGVPFVLALVMSCVTLAILGA 70

Query: 108 -MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
            +   L +   +G     +T++++      L     +  G+               V  +
Sbjct: 71  LIERFLFAPVIKGSAREESTMLLAAGIAFFLDAVILLVFGEK-----------QRGVPKI 119

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
           +         +I       + +       + I  ++ T    A R +  ++ A   +   
Sbjct: 120 VDGVFNYDFRLIMPYDRILICVLAILSIVAFIGLMQYTKTGRALRALAQDRTAAQLMGVN 179

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +    +  FA+ +   G+ G                   +I    +V++GG   +S    
Sbjct: 180 VDRYSMIGFALGAMLAGLVGGLLVTITGV--NLGMGGPTSIKAFMMVMIGGAGVISGAIW 237

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              IL  +  +            L     +      L+ ++L + + +R   L+ 
Sbjct: 238 GGIILGFMEAI-----------GLALLYQYGDITYLLIFVSLMIFLAIRPQGLMG 281


>gi|187919292|ref|YP_001888323.1| monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
 gi|187717730|gb|ACD18953.1| Monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
          Length = 328

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/323 (14%), Positives = 105/323 (32%), Gaps = 26/323 (8%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGA-TKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
           F+ R+    ++  L+A+V     F+   +   S + +  +  Q ++  + A G +++V  
Sbjct: 14  FAERMPSLAEVGPLIALVLACGFFISQSSRFLSFQNLSLILQQTMVVAVIAIGQTLIV-L 72

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G + L+C +  A G+          G+   L I      S   G + G+   + +    
Sbjct: 73  TGGIDLSCGMVMAFGSIIMTKFAVTLGVPPVLAILCGVGASALFGALNGVLITRIKLPAF 132

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
            +    ++  F    I                      +            ++F +    
Sbjct: 133 IVTLGTLNIAFALTQIY-----------------SNAESVSNLPDAIMFLGNTFKLGPAD 175

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           + Y  +    +  +    LR T        + +N +A   +  +     L+ ++++ A  
Sbjct: 176 VTYGTVLTLLMYLATWFVLRDTVPGRHLYALGNNPEAARLMGLSSQKILLTVYSLAGAIY 235

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVE 296
           G+A     +    +       +EN+  I+ V+L      GG  S+S       I+     
Sbjct: 236 GIAALLSVSRTG-VGDPQAGQTENLDSITAVVLGGTSLFGGRGSISGTLLGALIVGVFRN 294

Query: 297 LCCGMNFYYFNSLLKFDCSFNMR 319
               +       +L       + 
Sbjct: 295 GLTLIGVSSVYQVLITGMLVILA 317


>gi|332799689|ref|YP_004461188.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp.
           Re1]
 gi|332697424|gb|AEE91881.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter
           sp. Re1]
          Length = 295

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 87/305 (28%), Gaps = 28/305 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     +IY + A G+S++  + GL +        +G Y  + +     +        
Sbjct: 10  ILNGLAMGVIYSLPALGISLIWNASGLFNFAQGDLLTLGGYLMLSIFGALKIPYIPAFVT 69

Query: 99  SAMISGA--CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +I G     +                  LI +      +     +  G      A+  
Sbjct: 70  VIVIMGLLGYILSQIYFYPMLEQGVNPQIILIGTIALSVFIRNLILVIWGSTPKTYANPF 129

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                               +     +  +++ +  L   +  +LR T I  A R +  N
Sbjct: 130 G-----------SKVMQIGKLYLMPHVIGIVIIVTLLLILLQYFLRGTMIGTAMRAVAQN 178

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           Q A + +           F +S+A   ++G   +                +  +S V++G
Sbjct: 179 QTASWLMGIRNDRMIALTFLLSTAIAAVSGVLISPIIPL--TPSMGGIIAVKAMSAVVIG 236

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S +       ++     +   +                        + L + +L R 
Sbjct: 237 GLGSFTGALVGGIVVGVAETIFATLVD-------------PAYRDVFTFVVLVIFLLFRP 283

Query: 337 HSLLR 341
             + R
Sbjct: 284 GGIFR 288


>gi|313126035|ref|YP_004036305.1| amino acid/amide ABC transporter membrane protein 1, haat family
           [Halogeometricum borinquense DSM 11551]
 gi|312292400|gb|ADQ66860.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Halogeometricum borinquense DSM 11551]
          Length = 368

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/324 (13%), Positives = 93/324 (28%), Gaps = 37/324 (11%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---------------- 86
            ++ L+  +   GLS+    L   +         GA+S                      
Sbjct: 56  LMRGLVIGLAGIGLSMTYSILNFANFAHGDFITAGAFSGWATTYVLAGLGRADIGALVLV 115

Query: 87  -------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                     L I +     A+I+G          L    D      +   +    ++  
Sbjct: 116 GAGGSVFGGTLGIGITGTPLAVIAGLLVAGAFTIVLSLAVDRAIFRPIRDEDGITLLITS 175

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                  +  +         GTT +            V   +    +++    L   + L
Sbjct: 176 IGVAFALRYMMQFVFGSNVRGTTAQPPSFAVYLLDGAVRINMHDLTLVVVAGGLMLGVHL 235

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L+RT +  A R + DN+               S + +     G+AG  F   +  +  +
Sbjct: 236 LLQRTKLGKAMRAMADNEDLARVTGIPTERVVRSVWVIGGGLTGVAGYMFVLWKGTLGFN 295

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
              +   +++ + VILGG+ S+        ++                + L      +  
Sbjct: 296 D-GWLLLLLIFAAVILGGIGSIYGAIAGGLVIGL-------------TASLSVLWIPSAF 341

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
                 + + +++L++   L   R
Sbjct: 342 ARAAAFVVMIVILLVKPSGLFSGR 365


>gi|323525862|ref|YP_004228015.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
 gi|323382864|gb|ADX54955.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
          Length = 355

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 100/324 (30%), Gaps = 38/324 (11%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +   +L  L      +     ++  QI   V+ + G++ V+   G + L+     
Sbjct: 55  LAGALLGMIVLFSLLSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAG-IDLSVGSVL 113

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GA    +   ++G        +    +   G I G  ++ +R     ++  ++     
Sbjct: 114 ALGASVVSVAALKWGWGPLPSALLGVAAAALTGTITGAVTVGWRIPSFIVSLGVLEA--- 170

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                             A  L +  T  R+      F        + +    L    + 
Sbjct: 171 ------------------ARGLAYQMTNSRTAYIGDAFDFLSNPIAVGISPAFLIAVAVM 212

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L RT        I  N++A           K+  FA+  A  G+A  F  +  +
Sbjct: 213 VIAQLVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKVIVFALMGALAGLASLFQISRLE 272

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +               
Sbjct: 273 AADPNAGVGVELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLA---------- 322

Query: 310 LKFDCSFNMRHTTLMVIALFLVIL 333
            +   +   +      + +  V+L
Sbjct: 323 -QIGANEPTKRMITGAVIVVAVVL 345


>gi|262276904|ref|ZP_06054697.1| inner-membrane translocator [alpha proteobacterium HIMB114]
 gi|262224007|gb|EEY74466.1| inner-membrane translocator [alpha proteobacterium HIMB114]
          Length = 297

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 100/302 (33%), Gaps = 14/302 (4%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
             +F     + + I    +  +++ + A+G+++  G + ++++       +G Y    + 
Sbjct: 3   FLVFQVPALTAQAILDGILLGILFALIAYGMALQWGVMNIINIAQGELVIMGGYIAYFMY 62

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
                  W  I VS +I    G+ +    +    D     +++ +     ++++      
Sbjct: 63  MSGIHPAW-GIFVSPIIMFFVGVFIYKLVINKVVDRDMFISILATFGISILMMQLMNFGF 121

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G                 +S        ++ V       +  +     +  + ++++++ 
Sbjct: 122 GSD-----------VVVAQSDFGTTMLFNNSVTLPNSKIFSAVVSIVCAVLLTIYMKKSK 170

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +  A R    N +A   L         S F +++A  G+AGA  A               
Sbjct: 171 LGRAIRATAQNARAAKILGVDTEKVYASTFGINAALCGVAGALVA--ITFTLHPYVGLPY 228

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
            +    IVI+ G+ +L  +A +   L    E    +    F     F     +       
Sbjct: 229 TVRSFMIVIVAGLGNLPGVAMSGMGLGVFEEFADYLLGTEFRIATVFFLLVLILVYRRFK 288

Query: 326 IA 327
           +A
Sbjct: 289 LA 290


>gi|312879501|ref|ZP_07739301.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Aminomonas paucivorans DSM 12260]
 gi|310782792|gb|EFQ23190.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Aminomonas paucivorans DSM 12260]
          Length = 291

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 79/304 (25%), Gaps = 24/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G S+V   L   +        +GAY  + L S+    + L++  
Sbjct: 6   LVTGLSIGGIYALMAVGYSLVFSVLNFSNFAHGAVIMLGAYMGLGLVSKLHAGLGLVVAG 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S M +G   +     +      +    +L +        +  + +     G        F
Sbjct: 66  SMMGAGLLAVANEKLAYSL-LRHRKAPSLYLMISAMGCAVFLENLVYATIGSRFYAYPEF 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                 +               + L+L RT    A R    +  
Sbjct: 125 FSRQTVP-------LFGGATVSLLDLGAFALSLVSIGGLHLFLTRTRTGVAIRAGVSDMT 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F ++  F G+AG F            +            ++GG+
Sbjct: 178 MCSLMGVNLDRLISVVFLLAGLFGGIAGVFLGIKYLVYPTMGW---VTNKAYIAAVIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        +L  +              +  F               L  +++   + 
Sbjct: 235 GSLPGALVGGLVLGVLETFVSTYVSSVMRDVFSFG-------------LLIALLVCLPNG 281

Query: 339 LLRL 342
           L   
Sbjct: 282 LFGR 285


>gi|260893444|ref|YP_003239541.1| inner-membrane translocator [Ammonifex degensii KC4]
 gi|260865585|gb|ACX52691.1| inner-membrane translocator [Ammonifex degensii KC4]
          Length = 292

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 98/304 (32%), Gaps = 23/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G  ++  + G L+        +GAY  + L + Y +     I +
Sbjct: 6   LLTGLAIGSIYALVALGFVLIYKASGCLNFAQGEFLLLGAYVALTLVATYKVPFLPAIIL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  ++   G+++    L+       I+ ++++     ++        G            
Sbjct: 66  TLAVAALVGLVVERLVLRPFIGEPVISVIMVTLGLSALMRGIFQALWGTDTRVFPPIFPQ 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V       + L     L   + L+ + T      R + D+Q+
Sbjct: 126 -----------EPVSLGGVSVSAVYLWSLGLAVLLLLLLSLFFKFTTTGIVMRAVADDQQ 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+  ++       +A+++    + G   +        +    S  + V+ +VILGG+
Sbjct: 175 AALSVGISVKRVFGITWAIAAVVAAVGGILLSNIN---GVNASLASLGLKVLPVVILGGL 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  +     G         L+    F +    L+V         R + 
Sbjct: 232 ESVPGAVVGGFVIGLIESFVGGYLDPLVGGGLREVVPFVILLLVLLV---------RPYG 282

Query: 339 LLRL 342
           L   
Sbjct: 283 LFGE 286


>gi|225571326|ref|ZP_03780322.1| hypothetical protein CLOHYLEM_07424 [Clostridium hylemonae DSM
           15053]
 gi|225159802|gb|EEG72421.1| hypothetical protein CLOHYLEM_07424 [Clostridium hylemonae DSM
           15053]
          Length = 329

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/321 (14%), Positives = 114/321 (35%), Gaps = 18/321 (5%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +L+++  IL L+ ++Y + + +   A    + I  +       +M A GL +VV   G +
Sbjct: 5   KLDRFQGILLLIIILYSVFVAVKNPAFIHIETIFDITRVASTTLMVAIGL-LVVMISGGI 63

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            ++ +     G+Y+ + +    G+        S+ + G    ++    + +      I T
Sbjct: 64  DVSFMAVALFGSYTTINIMIGTGIDNLAFAFFSSALIGGILGVINALLISWLKLPPFIIT 123

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L    +F  I+  +    +  AG+            +   +  F   S F I ++ +   
Sbjct: 124 LGTQNLFHGIMTTFISDKSFGAGV------------LPESLHSFGQASVFKIKDVGLTAS 171

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           ++ +   +      L RT +      + +++++           +L  +  S    G+ G
Sbjct: 172 VIPVLLAALVTWFVLYRTMVGRGIFAVGNDEESARRAGFNPFRIRLFVYVYSGILAGIMG 231

Query: 247 AFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
             + A  + + P+     E I+V ++V     I GG   +        I+  +      +
Sbjct: 232 MMYVAQTNALYPNKLVGDELIVVAAVVIGGTKITGGQGKIFGAVLGVIIIYLLNTTLIMI 291

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
                 + L       +    
Sbjct: 292 GLSSSWNNLFVGTILVISVAV 312


>gi|152995882|ref|YP_001340717.1| monosaccharide-transporting ATPase [Marinomonas sp. MWYL1]
 gi|150836806|gb|ABR70782.1| Monosaccharide-transporting ATPase [Marinomonas sp. MWYL1]
          Length = 324

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/324 (10%), Positives = 93/324 (28%), Gaps = 24/324 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           RL+       +  ++  L   +        + I ++  Q+    + A G++ V+   G +
Sbjct: 15  RLDIATYAPFIALLLLVLFSSIASEHFLMPRNITNVLRQVSYTGIIALGMTFVI-IAGGI 73

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+     +++ +  G   W +    +      G+                A 
Sbjct: 74  DLSVGSMVALVGVLSIMIINGAGDGWWAVAMAVSSAIALGGVF--------------GAI 119

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
             +      +      +        +   +   G  V     F      ++    +  +V
Sbjct: 120 NGLVITRGKVASFIATLATMSIFRSMTLYISDAGEMVSQNQHFADIGGGYLWAIPYPVWV 179

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            L +      ++   + +A       +  N K        + +     F ++   +G++ 
Sbjct: 180 FLLLAVAYHILL---KHSAFGRHVCAVGSNAKVASYSAIKVRWVYFLTFLIAGVSVGISA 236

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCG 300
              A+  + +SP        +  I+ V++GG        ++        IL  +  +   
Sbjct: 237 VLLASRLNSVSPGDAGLFYELDAIAAVVIGGTALSGGKGTIWGTVIGAIILGIINNMLNL 296

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLM 324
           M    +   +              
Sbjct: 297 MGISPYLQGMVKGLVILTAVLVQF 320


>gi|238751543|ref|ZP_04613034.1| Inner-membrane translocator [Yersinia rohdei ATCC 43380]
 gi|238710261|gb|EEQ02488.1| Inner-membrane translocator [Yersinia rohdei ATCC 43380]
          Length = 346

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/317 (10%), Positives = 90/317 (28%), Gaps = 22/317 (6%)

Query: 13  KILCLLAVVYPLLLFLF--LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
            ++  +A+++ +L +         +   +  + +Q+ I  + A G++ V+ + G + L+ 
Sbjct: 36  IVMIGIALIFEILGWFIRDQSFLLNPNRLLLIILQVAIIGIIAVGVTQVIITTG-IDLSS 94

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A+ A               L     ++      ++    ++               
Sbjct: 95  GSLIALTAVVAAS----------LAQTSDSISPMYPHLLDLPAAIPITAGIGVGIVCGFI 144

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             F        P       +  A  L    T    +       ++     + +   L+  
Sbjct: 145 NGFLITRTGIPPFIATLGMMVSARGLAQYYTKGNPVSFLSDDFTAIGQGAMPVIIFLVVA 204

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                ++    + T        I  N  +       +    ++ + ++    G+AG   A
Sbjct: 205 VVFHIAL----KHTRYGKYVYAIGGNMISAKVSGINVNKYLVAVYTIAGGLAGLAGVVLA 260

Query: 251 ASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A        M +  E   + + VI     +GG+  ++       IL  +      +    
Sbjct: 261 ARVSSGQSSMGQSYELDAIAAAVIGGSSLMGGVGRITGTVIGAVILGLIKSGFTFIGVDS 320

Query: 306 FNSLLKFDCSFNMRHTT 322
           +   +            
Sbjct: 321 YIQDIIKGVIIVSAVAI 337


>gi|119716344|ref|YP_923309.1| inner-membrane translocator [Nocardioides sp. JS614]
 gi|119537005|gb|ABL81622.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Nocardioides sp. JS614]
          Length = 302

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 97/307 (31%), Gaps = 22/307 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +Q  +Y + A G+ +V  + G+ +         G ++       +G S    I  
Sbjct: 12  VVTGVLQGSVYALVALGIVLVYRASGVFNFAQAEFGTTGLFATYSALVLWGWSYPAAIAF 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++ A G++     +    +   +           +L+    +     G         
Sbjct: 72  GLGVAVAMGLVTERLVVHPLRNASRVT----------VLVGTAGVALAAVGFQFWRFNET 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L  ++  +   F     F         + LG+  ++   +    R+A   A +  +    
Sbjct: 122 LIMSMPKIDDGFFLVPPFGAPVTVQQLITLGVLIVACIGLALFFRSASGLAIQAAQQEPT 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV--ISIVILG 276
           A   +  ++    +  +A+++   G+AG     +    +  +   +   ++      +L 
Sbjct: 182 AAELVGISVRRVSMLTWAIAALLGGLAGILSGPNTTFTAGFLTFGAGRALLPGFMAAVLA 241

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM S+         +  V +L            L            L+   L  V+L+R 
Sbjct: 242 GMRSMPGAVAGGLAVGVVEQL----------GTLSIMIEVPGARAMLLFGFLLAVLLVRP 291

Query: 337 HSLLRLR 343
             +   R
Sbjct: 292 QGIFVRR 298


>gi|297528835|ref|YP_003670110.1| inner-membrane translocator [Geobacillus sp. C56-T3]
 gi|297252087|gb|ADI25533.1| inner-membrane translocator [Geobacillus sp. C56-T3]
          Length = 293

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 86/288 (29%), Gaps = 14/288 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      IY + A G  I     G+L+L       +GA    I     G+     I +
Sbjct: 11  LFSGLTVGSIYALVALGFVITYSVTGILNLAQGDFAMLGALFC-ITLVNNGVPFAAAIGL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +   A G +    +++          +I++     +   +  +  G     +      
Sbjct: 70  SMLAVMAVGTLFERLAIQPARRSPVAVLIIITIGVSFVFRGFALLVWGTDPYALRPFTGH 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V   +  ++             + ++      A++ L+  RT I  A      N  
Sbjct: 130 GALEVFGAVIQWQ-----------SVWAIVISLASFAALHLFFHRTYIGKAVAACVINPF 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   I    L A AVS+    +AG   A      +         +      ++GG+
Sbjct: 179 AARLMGIDIRKMSLGAMAVSAGLGALAGIIIAP--ISGASYDMGMMIGLKAFIAAVVGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           T+         ++  +     G     +   + F     +       +
Sbjct: 237 TNAPAAIAGAFLVGLLESFAEGYLSSGYKEAISFGLLLLVLLFMPNGL 284


>gi|283784348|ref|YP_003364213.1| sugar ABC transporter permease [Citrobacter rodentium ICC168]
 gi|282947802|emb|CBG87360.1| putative sugar ABC transporter, permease protein [Citrobacter
           rodentium ICC168]
          Length = 355

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/300 (11%), Positives = 84/300 (28%), Gaps = 10/300 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      + +    +   +  M   + I  + A G+++V+   G + L+      
Sbjct: 17  FIALLLVIAFFSVMVPNFLTTSNLLIMTQHVAITGLLAIGMTLVI-LTGGIDLSVGAVAG 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I       L +         I    +      + +    + F    +     +   I   
Sbjct: 76  ICGMVAGALLTNGLPIWGGNILFFNVPEVILCVALFGVVVGFINGAVITRFGVAPFICTL 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            ++         + +   D   +        +    F +      + +Y  +  M     
Sbjct: 136 GMMYVAR----GSALLFNDGSTYPNLNGMEALGNTGFATLGSGTLLGIYLPIWLMIAFLL 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +T +      I  N+ A       I+  K+  +A S       G   A+    
Sbjct: 192 LGYWITTKTPLGRYIYAIGGNESAARLAGVPIVKTKIFVYAFSGLCAAFVGLIVASQLQT 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + V     + GG   +S       +++ + +    M    F  ++
Sbjct: 252 AHPMTGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFLADGMVMMGVSDFWQMV 311


>gi|260430945|ref|ZP_05784916.1| branched-chain amino acid ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
 gi|260414773|gb|EEX08032.1| branched-chain amino acid ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
          Length = 343

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 50/344 (14%), Positives = 104/344 (30%), Gaps = 52/344 (15%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---------------- 82
           I +   +   Y + A GL+++ G+LG+++      + IGA+  V                
Sbjct: 8   ILNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFCAVTLQKIFNLSYEVIDET 67

Query: 83  -----------------------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
                                  +  +    S+ L I  +  I    G +M    +K   
Sbjct: 68  QTDFLGNPLKVKTPYVESWFGPEMGATIIDWSVPLSILFAIPIMLMVGYVMERGLIKHFY 127

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
                  ++++     +L +      G   I         G+    L     F  + ++Y
Sbjct: 128 KRPHADQILVTFGLAIVLQEIIKYFFGANPIQTPPPAALSGSVDLGLA--LGFDPNAIVY 185

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
            I+     L    +   +  +L+ T      R    +++    L   I       F +++
Sbjct: 186 PIWRLVYFLFAVVIIGGVFSFLQFTTFGMVVRAGMADRETVGLLGINIDRRFTIMFGIAA 245

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  G+AG  +             F     V+ +V    M SL     A  +L  +     
Sbjct: 246 AVAGLAGVMYGPLNPPNYHMGMDFLVLSFVVVVVGG--MGSLPGAVLAGFLLGILESFAS 303

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                          +    +  ++ +   +V+L R   L+  +
Sbjct: 304 T---------TWATTTIPGINQIIIYLVAIIVLLTRPRGLMGRK 338


>gi|218549838|ref|YP_002383629.1| transport system permease [Escherichia fergusonii ATCC 35469]
 gi|218357379|emb|CAQ90017.1| putative transport system permease for a carbohydrate-related
           molecule [Escherichia fergusonii ATCC 35469]
          Length = 355

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 83/312 (26%), Gaps = 10/312 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      + +    +   +  M   + I  + A G+++V+   G + L+      
Sbjct: 17  FIALLLVIAFFSVMVPNFLTASNLLIMTQHVAITGLLAIGMTLVI-LTGGIDLSVGAVAG 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I       L +         I    +      + +    +      +     +   I   
Sbjct: 76  ICGMVAGALLTNGLPLWSGNIIFFNVPEVILCVAVFGILVGLVNGAVITRFGVAPFICTL 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            ++         + +   D   +        +    F +      + +Y  +  M     
Sbjct: 136 GMMYVAR----GSALLFNDGSTYPNLNGIETLGNTGFATLGSGTFLGVYLPIWLMIGFLV 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +T +      I  N+ A       I+  K+  +A S       G   A+    
Sbjct: 192 LGYWITTKTPLGRYIYAIGGNESAARLAGVPIVKVKVFVYAFSGLCAAFVGLIVASQLQT 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + V     + GG   +S       +++ + +    M    F  ++
Sbjct: 252 AHPMTGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFLADGMVMMGVSDFWQMV 311

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 312 IKGLVIVTAVVV 323


>gi|152974390|ref|YP_001373907.1| monosaccharide-transporting ATPase [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023142|gb|ABS20912.1| Monosaccharide-transporting ATPase [Bacillus cytotoxicus NVH
           391-98]
          Length = 311

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 98/312 (31%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLVLIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        ++    +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMLASDMDPFLAIVV--GLLAGLAMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHVMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTLAIGGNEEAAILSGIHVTRIKVMIYGLSGVLAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGSSYELDAIAAVVLGGTSLSGGKGWIVGTFIGALIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|323483066|ref|ZP_08088459.1| inner membrane ABC transporter permease ytfT [Clostridium symbiosum
           WAL-14163]
 gi|323403606|gb|EGA95911.1| inner membrane ABC transporter permease ytfT [Clostridium symbiosum
           WAL-14163]
          Length = 319

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 96/287 (33%), Gaps = 23/287 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L + + LL  LF         ++++  Q+   ++   G+++V+ S G + ++     
Sbjct: 17  AITLLLFFVLLNSLFTPNFFRIGNLNNVITQLCPTILCGMGMTLVI-STGGIDISVGSVM 75

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       L    GL   +L  V+  +   C   + +  L+ +   + +  ++      
Sbjct: 76  ALAGVLTARLMPETGLPAAVLAAVAVSVVVGCFTGIMVGKLRLQAMVITLGLMLGLRGVA 135

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +L   + I   K G        +    +  +I     P    +                
Sbjct: 136 QVLCGGRDIYFNKLGEVGKQLSLWGTYKLGGVIPVQIIPIVLSV---------------- 179

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A++ + + +T +    + + DN ++            +  + +S+ F   AG F AA   
Sbjct: 180 AAVWVMIEKTVLGRQIQAVGDNLRSSSLAGINTSRTLMIVYGLSTFFAAFAGIFQAAKVS 239

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVV 295
             +         +  I+ V++GG         +        I+  + 
Sbjct: 240 VAAGSSLGQLAELDAIAAVVIGGTPMSGGKAHVLGTVVGALIMQMIT 286


>gi|282934812|ref|ZP_06340047.1| ribose transport system permease protein RbsC [Lactobacillus
           jensenii 208-1]
 gi|281301122|gb|EFA93431.1| ribose transport system permease protein RbsC [Lactobacillus
           jensenii 208-1]
          Length = 318

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/321 (13%), Positives = 90/321 (28%), Gaps = 23/321 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +L+    +  +  ++  +L+        +   + ++  Q  I  + A+G++ V+   G +
Sbjct: 7   KLDLSKYMALIALIILVVLITFLNPQFIAPSNLMNLLRQSSINCLIAFGMTFVI-LTGGI 65

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A        L           I    + +   G+   L S      Y  +  
Sbjct: 66  DLSVGSVLAFTGAVAATLILSGTPVWLACIACLILGAILGGVNGFLIS------YGKVTA 119

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
            I +     I      +  G   I   +               F  P   +I  +     
Sbjct: 120 FIATLATMTIWRGATYVFTGGNPITGPNMNNSFFFQFIGNGYLFGIPFPVIITLLIF--- 176

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
                   A++ + L +TA       +  N+KA F          +  + +S     +A 
Sbjct: 177 --------AAVYILLHKTAFGRKTFALGGNEKAAFVAGVKTKKIIVLIYIISGVLAALAA 228

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
               +      PD     E   + S VI     +GG   +        ++  +      +
Sbjct: 229 LILTSRLSSAQPDAGSAYEMDAIASAVIGGASLMGGKGRMQGTLVGALLIATLSNGMNLL 288

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
               F   +       +    
Sbjct: 289 GINSFYQQIVKGLVILVAVMI 309


>gi|17228542|ref|NP_485090.1| permease protein of ABC transporter [Nostoc sp. PCC 7120]
 gi|17130393|dbj|BAB73004.1| permease protein of ABC transporter [Nostoc sp. PCC 7120]
          Length = 377

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 62/173 (35%), Gaps = 3/173 (1%)

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I +  +  V L +       + +L R+      + IR++++   ++   + + KL +  +
Sbjct: 208 IPKAGLMLVSLLVLAFVFWRLEYLVRSPWGRVLKAIREDEEIPKAMGKNVFWYKLQSLML 267

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
             A  G+AGAFFA     I PD F+         +VILGG  +         I      +
Sbjct: 268 GGAIAGIAGAFFAWQISAIYPDNFQPQLTFDSWIMVILGGAGNNIGSILGAVIYFAYDAI 327

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              +                      + + L ++++ R   +L  +      +
Sbjct: 328 TREVLPKIIPLDEA---RLGAFRIMCIGLILMVLMIWRPQGILGKKEELTLGK 377



 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 62/155 (40%), Gaps = 1/155 (0%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y+  + I    + +F+ GL++  G  GL++   +    +GAY+ V+L  +        I 
Sbjct: 4   YLIFLAISTATFALFSLGLNLQWGFTGLINFGHIAFMTLGAYTTVLLSLKGVPLFISAIV 63

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            + + +   G+++G  +L+ R DYLAI T+   E+ + ++                    
Sbjct: 64  GA-IFAALLGLVIGFATLRLREDYLAIVTIGTGELIRLVVNNQDLPVGDTWVSGAFGVQS 122

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           +          FFR     ++  +F   V     +
Sbjct: 123 YPIPLSTEPNLFFRLLMIGILTLLFAVTVFSLWRW 157


>gi|108803789|ref|YP_643726.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
 gi|108765032|gb|ABG03914.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
          Length = 319

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 91/303 (30%), Gaps = 27/303 (8%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           ++ +   +  +     ++G QI + ++ A G + V+   G + L+     A+    +   
Sbjct: 29  VMAVLSPSFLTVTNFFNVGTQIAVILILALGQTFVI-VSGGIDLSVGSVLALAGVVFGWA 87

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            +  GL +   + +      A G++ GL               I +    +       + 
Sbjct: 88  TAVAGLPLAPALLLGLGAGAAAGLVNGLLITLGNLPPF-----IATLAMLSAARGLALVI 142

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
           +G   +                                +   ++ M  +       LR T
Sbjct: 143 SGGVPLSPIPEPVR--------------HLGSGDLFGAVPLPVVLMIAMWLLTAAILRYT 188

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                   I  N++A       +   KL  + +S  F G+AG    A      P    F+
Sbjct: 189 YPGRCMYAIGGNEEAARLSGIGVGRQKLLIYTLSGLFAGVAGILQTARLASAQPQA-GFT 247

Query: 265 ENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
             +  I+ V++      GG+ + S       IL  +      +N   F   +       +
Sbjct: 248 FELDAIAAVVIGGASLTGGVGTASGTLIGALILGVLRNGLNLLNVSAFWQQVVIGAVIAL 307

Query: 319 RHT 321
              
Sbjct: 308 AVM 310


>gi|284044190|ref|YP_003394530.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283948411|gb|ADB51155.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 328

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/313 (13%), Positives = 90/313 (28%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +V  +   +   A  S   ++S    I    + A G ++++   G   L+     
Sbjct: 29  LIFALLVAIVAFTIVSPAFASGATVESTIRTIAFVGLVAIGQTMLL-IAGEFDLSVGSVA 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           ++GA    +L +R  L I + I ++       G++ GL              L +     
Sbjct: 88  SLGAVVAAVLMTRASLPIPVAIALALCAGLGVGLVNGL--------------LTVKVGLP 133

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +++    +   + G YV      +      +                +   +     L+
Sbjct: 134 ALIVTLGMLFAARGGAYVISDGREVYPLPDGVRALAGSILG-------LPLSVWVFAALA 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 +RR+           N +A           K++AFA++     +AG    A   
Sbjct: 187 LVADAVVRRSGFGRRLYATGGNAEAAQLAGIRTDRVKIAAFAITGCLAALAGVLLMARLR 246

Query: 255 RISP-----DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P             ++V  + + GG+ S++        L  V               
Sbjct: 247 SGDPQIGIEWELSVIAAVVVGGVSLRGGIGSIAGALLGVLFLQVVSTGLVIAGVESALQP 306

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 307 VAVGVVMIAALAV 319


>gi|225686620|ref|YP_002734592.1| hypothetical protein BMEA_B0837 [Brucella melitensis ATCC 23457]
 gi|256262244|ref|ZP_05464776.1| monosaccharide-transporting ATPase [Brucella melitensis bv. 2 str.
           63/9]
 gi|225642725|gb|ACO02638.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
 gi|263091943|gb|EEZ16265.1| monosaccharide-transporting ATPase [Brucella melitensis bv. 2 str.
           63/9]
 gi|326411010|gb|ADZ68074.1| conserved hypothetical protein [Brucella melitensis M28]
 gi|326554301|gb|ADZ88940.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 346

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/313 (10%), Positives = 85/313 (27%), Gaps = 10/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +    +         +      M   + I+ + A G+ ++V   G + L+     
Sbjct: 31  AFFALIAIIAVFSFLSPYYFTVDNFLIMSSHVAIFGLLAIGM-LLVILNGGIDLSVGSTL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       L     L  + +I    + +           +      +    +    +  
Sbjct: 90  GLAGVVAGFLMQGVTLQEFGIILYFPVWAVVLITCALGAFVG----AVNGVLIAYLRVPA 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +             + + + L +     R  +    F          +   +L +  L+
Sbjct: 146 FVATLGVLYCARGVALLMTNGLTYNNLGGRPELGNTGFDWLGFNKLFGVPIGVLVLAILA 205

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L RTA          N++A       +   K+S + +S     +AG   ++   
Sbjct: 206 IICAIVLNRTAFGRWLYASGGNERAAELSGVPVKRVKVSVYVISGICAAIAGLVLSSQLT 265

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG  ++        ++  + +    +    +   
Sbjct: 266 SAGPTAGTTYELTAIAAVVIGGAALTGGRGTIQGTLLGAFVIGFLSDGLVIIGVSSYWQT 325

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 326 VFTGAVIVLTVLL 338


>gi|254486735|ref|ZP_05099940.1| inner-membrane translocator [Roseobacter sp. GAI101]
 gi|214043604|gb|EEB84242.1| inner-membrane translocator [Roseobacter sp. GAI101]
          Length = 305

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 105/306 (34%), Gaps = 15/306 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + A GL+++ G +GL++L     Y +              +  +    
Sbjct: 10  VLNGLQFGVMLFLMAAGLTLIFGVMGLINLAHGSLYMV----------GAFAAAAVAGFT 59

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            + +      +    +     + L I  L   +    +L  +  I     G       + 
Sbjct: 60  GSFVLALIAALAAAAAAGALIELLVIRRLYDRDHLDQVLATFALILIFSEGTRYIFGSFP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   + + +         + Y ++   ++     ++A + L + RT I    R    +++
Sbjct: 120 LFLDIPAALSGPILLPGGIYYPLYRLVIIGAGLLVAAGLFLLIARTRIGVQIRAGEADRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+
Sbjct: 180 MIAALGVDISKLYTLVFALGAALAGLAGALVGAIQSV--QVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMR 335
            S+      + ++     L   +    F + ++   +  +        + I +  V+L +
Sbjct: 238 GSIKGALVGSILVGLTDTLGGVLLPPLFATFMEPSSANAVGSAVASMAIYILMAGVLLFK 297

Query: 336 SHSLLR 341
              L  
Sbjct: 298 PSGLFG 303


>gi|299132368|ref|ZP_07025563.1| inner-membrane translocator [Afipia sp. 1NLS2]
 gi|298592505|gb|EFI52705.1| inner-membrane translocator [Afipia sp. 1NLS2]
          Length = 297

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 86/308 (27%), Gaps = 26/308 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ S       Y + A G  I+  +   ++        +GA   ++   R       ++
Sbjct: 12  QYVLSGLAIGGCYALVALGFHIMWSAAKAVNFAHGDTLMLGAVLTIMAIDRGIPLPLAIL 71

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A+      ++       F     +I  ++ +     +L     +  G          
Sbjct: 72  AAIAVSCLFGVLLERFAVRPFAKSASSIGWMLTTIAIGIMLEALVTMQFGG--------- 122

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + S                    + +        +    RRT I  A   +  +
Sbjct: 123 --FSRALPSPGVERAISIGGAGVYPQELVIPVFAVLAMLGLSWMQRRTLIGRAMHAVSFD 180

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   + +    +F +++A  G AG   A             +  +   ++ I+G
Sbjct: 181 RHAASLMGINVNWMFAFSFGLAAALGGAAGILIAPITQA--SASMGLTLGLKGFAVAIIG 238

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+TS   +  A      V +   G                      +      LV+L+  
Sbjct: 239 GITSGPGVVIAGLGFGIVEKFVEGYIS-------------TAAREIVGFGLTILVLLVFP 285

Query: 337 HSLLRLRT 344
             L   R 
Sbjct: 286 QGLFGKRE 293


>gi|294085324|ref|YP_003552084.1| branched-chain amino acid ABC transporter permease [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664899|gb|ADE40000.1| branched-chain amino acid ABC transporter, permease protein
           [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 292

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 100/306 (32%), Gaps = 25/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I S      +Y + + GL++  G++ + ++   +   +GAY    L  + GL +WL    
Sbjct: 8   ILSGLTLGAMYALGSIGLALTYGTMRMFNMAHGVFMTLGAYCAYTLAGQMGLPLWLSFLG 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             M +G                 +    L   +   NIL+    +      + +     +
Sbjct: 68  GVMFAG--------LVAGLMHLAMVRHMLGTRDFEINILVATAGVGMLLQDLVLKAYGAY 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +   FR   S + Y+     VL G+      +IL   +T    + R    N++
Sbjct: 120 PFAQPVQIEGVFRILGSSIPYQSVAILVLAGILLGCMGLIL--TKTRFGLSIRATAMNRE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +        L+   ++ A  G AG   ++            +  +    I ++ G+
Sbjct: 178 AAQLMGVRTEHTYLTVLLMAGALAGAAGVMISSLSTL--SPEMGTNPAVRAFVICVVAGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  IL     +        +                LM+  + +V++ R   
Sbjct: 236 GSVPGAGIAALILGLFEAVVQFYIGARYG-------------LPLMLGLVIIVLIFRPAG 282

Query: 339 LLRLRT 344
           L   + 
Sbjct: 283 LFGRQE 288


>gi|288931543|ref|YP_003435603.1| branched-chain amino acid ABC transporter permease [Ferroglobus
           placidus DSM 10642]
 gi|288893791|gb|ADC65328.1| inner-membrane translocator [Ferroglobus placidus DSM 10642]
          Length = 295

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 89/308 (28%), Gaps = 28/308 (9%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
                     I+ +   GLS    + G+ +        +G Y      +   L ++    
Sbjct: 14  NFFDGVFIGSIFAIATIGLSFFYTTTGVFNFAHGALLMLGGYLTYTALTHLKLPLFFAAI 73

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            S ++  +        SL         + +I   +   +      +              
Sbjct: 74  FSVLLVASFMTAFYYLSLLPIRKQHITSIIITLALLLMLERLITVLYG------------ 121

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                            + V   +   YV +    +     L + +T I    R   DN+
Sbjct: 122 -PWGLPFPTFFPGVVNFAGVEVSLQKIYVTISNILVIFVFWLLISKTWIGLGIRATIDNE 180

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +L        L +  +SSA     G   AA+       M +   N++ I++ IL G
Sbjct: 181 DVAEALGINASRMHLLSVFISSAITAFGGINIAATLFLSPILMSQM--NVVAITVSILAG 238

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+  +  A  IL     +   +   +F                 M + + LV+++R  
Sbjct: 239 LGSIWGVIPAAFILGFADVIGATIFGGWF-------------RFVSMTLVVILVLIVRPR 285

Query: 338 SLLRLRTP 345
            +      
Sbjct: 286 GIFGQMER 293


>gi|17988778|ref|NP_541411.1| ribose ABC transporter permease [Brucella melitensis bv. 1 str.
           16M]
 gi|62317311|ref|YP_223164.1| ribose ABC transporter permease [Brucella abortus bv. 1 str. 9-941]
 gi|83269292|ref|YP_418583.1| inner-membrane translocator [Brucella melitensis biovar Abortus
           2308]
 gi|237816868|ref|ZP_04595860.1| ribose ABC transporter permease [Brucella abortus str. 2308 A]
 gi|254690817|ref|ZP_05154071.1| inner-membrane translocator:Sodium:dicarboxylate symporter
           [Brucella abortus bv. 6 str. 870]
 gi|254698595|ref|ZP_05160423.1| inner-membrane translocator:Sodium:dicarboxylate symporter
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|254700065|ref|ZP_05161893.1| inner-membrane translocator:Sodium:dicarboxylate symporter
           [Brucella suis bv. 5 str. 513]
 gi|254720271|ref|ZP_05182082.1| inner-membrane translocator:Sodium:dicarboxylate symporter
           [Brucella sp. 83/13]
 gi|254732042|ref|ZP_05190620.1| inner-membrane translocator:Sodium:dicarboxylate symporter
           [Brucella abortus bv. 4 str. 292]
 gi|256015622|ref|YP_003105631.1| ribose ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|256043730|ref|ZP_05446652.1| inner-membrane translocator:Sodium:dicarboxylate symporter
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|256058968|ref|ZP_05449182.1| inner-membrane translocator:Sodium:dicarboxylate symporter
           [Brucella neotomae 5K33]
 gi|256111225|ref|ZP_05452261.1| inner-membrane translocator:Sodium:dicarboxylate symporter
           [Brucella melitensis bv. 3 str. Ether]
 gi|256256000|ref|ZP_05461536.1| inner-membrane translocator:Sodium:dicarboxylate symporter
           [Brucella abortus bv. 9 str. C68]
 gi|260564917|ref|ZP_05835402.1| monosaccharide-transporting ATPase [Brucella melitensis bv. 1 str.
           16M]
 gi|260756393|ref|ZP_05868741.1| monosaccharide-transporting ATPase [Brucella abortus bv. 6 str.
           870]
 gi|260759821|ref|ZP_05872169.1| monosaccharide-transporting ATPase [Brucella abortus bv. 4 str.
           292]
 gi|260763060|ref|ZP_05875392.1| monosaccharide-transporting ATPase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882217|ref|ZP_05893831.1| monosaccharide-transporting ATPase [Brucella abortus bv. 9 str.
           C68]
 gi|261322913|ref|ZP_05962110.1| monosaccharide-transporting ATPase [Brucella neotomae 5K33]
 gi|261750551|ref|ZP_05994260.1| monosaccharide-transporting ATPase [Brucella suis bv. 5 str. 513]
 gi|265985286|ref|ZP_06098021.1| monosaccharide-transporting ATPase [Brucella sp. 83/13]
 gi|265990153|ref|ZP_06102710.1| monosaccharide-transporting ATPase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265992740|ref|ZP_06105297.1| monosaccharide-transporting ATPase [Brucella melitensis bv. 3 str.
           Ether]
 gi|297249357|ref|ZP_06933058.1| ribose transport system permease [Brucella abortus bv. 5 str.
           B3196]
 gi|306838588|ref|ZP_07471424.1| ribose ABC transporter permease [Brucella sp. NF 2653]
 gi|17984595|gb|AAL53675.1| ribose transport system permease protein rbsc [Brucella melitensis
           bv. 1 str. 16M]
 gi|62197504|gb|AAX75803.1| ribose ABC transporter, permease protein [Brucella abortus bv. 1
           str. 9-941]
 gi|82939566|emb|CAJ12542.1| Bacterial inner-membrane translocator:Sodium:dicarboxylate
           symporter [Brucella melitensis biovar Abortus 2308]
 gi|237787681|gb|EEP61897.1| ribose ABC transporter permease [Brucella abortus str. 2308 A]
 gi|255998282|gb|ACU49969.1| ribose ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|260152560|gb|EEW87653.1| monosaccharide-transporting ATPase [Brucella melitensis bv. 1 str.
           16M]
 gi|260670139|gb|EEX57079.1| monosaccharide-transporting ATPase [Brucella abortus bv. 4 str.
           292]
 gi|260673481|gb|EEX60302.1| monosaccharide-transporting ATPase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260676501|gb|EEX63322.1| monosaccharide-transporting ATPase [Brucella abortus bv. 6 str.
           870]
 gi|260871745|gb|EEX78814.1| monosaccharide-transporting ATPase [Brucella abortus bv. 9 str.
           C68]
 gi|261298893|gb|EEY02390.1| monosaccharide-transporting ATPase [Brucella neotomae 5K33]
 gi|261740304|gb|EEY28230.1| monosaccharide-transporting ATPase [Brucella suis bv. 5 str. 513]
 gi|262763610|gb|EEZ09642.1| monosaccharide-transporting ATPase [Brucella melitensis bv. 3 str.
           Ether]
 gi|263000822|gb|EEZ13512.1| monosaccharide-transporting ATPase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|264663878|gb|EEZ34139.1| monosaccharide-transporting ATPase [Brucella sp. 83/13]
 gi|297173226|gb|EFH32590.1| ribose transport system permease [Brucella abortus bv. 5 str.
           B3196]
 gi|306406231|gb|EFM62474.1| ribose ABC transporter permease [Brucella sp. NF 2653]
          Length = 346

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/313 (10%), Positives = 85/313 (27%), Gaps = 10/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +    +         +      M   + I+ + A G+ ++V   G + L+     
Sbjct: 31  AFFALIAIIAVFSFLSPYYFTVDNFLIMSSHVAIFGLLAIGM-LLVILNGGIDLSVGSTL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       L     L  + +I    + +           +      +    +    +  
Sbjct: 90  GLAGVVAGFLMQGVTLQEFGIILYFPVWAVVLITCALGAFVG----AVNGVLIAYLRVPA 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +             + + + L +     R  +    F          +   +L +  L+
Sbjct: 146 FVATLGVLYCARGVALLMTNGLTYNNLGGRPELGNTGFDWLGFNKLFGVPIGVLVLAILA 205

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L RTA          N++A       +   K+S + +S     +AG   ++   
Sbjct: 206 IICAIVLNRTAFGRWLYASGGNERAAELSGVPVKRVKVSVYVISGICAAIAGLVLSSQLT 265

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG  ++        ++  + +    +    +   
Sbjct: 266 SAGPTAGTTYELTAIAAVVIGGAALTGGRGTIQGTLLGAFVIGFLSDGLVIIGVSSYWQT 325

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 326 VFTGAVIVLAVLL 338


>gi|293395748|ref|ZP_06640030.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Serratia odorifera DSM 4582]
 gi|291421685|gb|EFE94932.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Serratia odorifera DSM 4582]
          Length = 346

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/328 (14%), Positives = 98/328 (29%), Gaps = 25/328 (7%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFL-----GATKSQKYIDSMGIQILIYVMFAWGLSIV 59
           S ++ K   I  ++  +  +   L           +   +  + +Q+ I  + A G++ V
Sbjct: 25  SGKMPKDVGIFIVMLGIALIFELLGWYIRDQSFLMNPSRLLLIVLQVAIIGIIAVGVTQV 84

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           + + G + L+     A+ A     L              +  IS     ++ LP+    G
Sbjct: 85  IITTG-IDLSSGSLIALSAVVAASLAQ-----------TADSISPMYPGLLDLPAAVPIG 132

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
             + I  L        I     P      G+ V+ R      T  + I F     + +  
Sbjct: 133 AGIGIGILCGFINGFLITRTGIPPFIATLGMMVSARGLAQYYTKGNPISFLSDDFTAIGQ 192

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
                 + L +    A   + L+ T        I  N  +       +    +  + ++ 
Sbjct: 193 GAMPVIIFLVIA---AVFHIALKHTRYGKYVYAIGGNMVSAKVSGINVNKYLVIVYTIAG 249

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGV 294
              G+AG   AA        M    E   + + VI     +GG+  ++       IL  +
Sbjct: 250 GLAGLAGVVLAARVSSGQSSMGMSYELDAIAAAVIGGSSLMGGVGRITGTLIGAVILGLI 309

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                 +    +   +            
Sbjct: 310 KSGFTFIGVDSYIQDIIKGIIIVAAVAI 337


>gi|290961665|ref|YP_003492847.1| ribose ABC transporter transmembrane protein [Streptomyces scabiei
           87.22]
 gi|260651191|emb|CBG74312.1| putative ribose transporter transmembrane subunit [Streptomyces
           scabiei 87.22]
          Length = 348

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/318 (9%), Positives = 87/318 (27%), Gaps = 15/318 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              + V       L  G+ +    +      + +  +   G+++ +   G+  ++     
Sbjct: 34  FIFVTVALFAYFALSEGSFRESATLLDTLRYVSVAAILGLGVTLTMAVGGM-DMSVGAVA 92

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G          +     + I          G++  L  +  +          M     
Sbjct: 93  GLGVSVAAQSMVVFNQIGTVAILAVLAAGALAGLLNALLIVVMKIPD-------MLATLG 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +          G  +   +     +         F        + +   +L    L+
Sbjct: 146 TMFVIQGTKLILVDGQSITPGMTLEDGSTAPGRFTAGFLKIDRGTVLGIPVSVLIFGALT 205

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +  ++L RT     +  I  N +A       +   +  A+ +S     + G   A+   
Sbjct: 206 VAAWVFLARTRWGRVFYAIGANPEASRLAGIRVGAYRALAYVLSGVLASVGGLILASRIG 265

Query: 255 RISPDMFKFSENIIVISIVILG------GMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +        S+ +  +++ ++G      G  ++   A    ++  +          Y+  
Sbjct: 266 Q-GDVSAGTSQLLEAVAVALVGTSVLGRGRPNVWGTALGAVLIGIITTGLTIKGLPYYTQ 324

Query: 309 LLKFDCSFNMRHTTLMVI 326
            +       +       +
Sbjct: 325 DVVEGAVLILALVFSFTL 342


>gi|194016395|ref|ZP_03055009.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Bacillus pumilus ATCC 7061]
 gi|194011868|gb|EDW21436.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Bacillus pumilus ATCC 7061]
          Length = 337

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 93/320 (29%), Gaps = 18/320 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y     L   V  ++      A      I ++   I I  + A GL+I +   G   L+ 
Sbjct: 27  YRYGTILTIAVLIVVFAAANPAFLQSGNIINILRSISIVTIIAVGLTISLAVNG-FDLSV 85

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +     + +   +  +  + I  +   +   G++  L  +K +   + +      
Sbjct: 86  GSVATLSNAIVISMFVWFSQNPLIAILSALAAALIVGLLNALMIVKMKIPDMLMT----- 140

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                  +    I  G A  Y           +           +F      + Y++L M
Sbjct: 141 -------LAMMFIIQGLAQTYTKGATISENMVLPDGTFSTGTIPAFFSKIGQVPYIILLM 193

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +     +++  T        I  N++A       +   K++A+ +S+ F  + G   A
Sbjct: 194 AVIVLFAHVFMTYTKHGRYMYIIGGNKEAARLSGIHVNKYKIAAYLLSALFAAIGGIVLA 253

Query: 251 ASRDRISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           +       +         V +      V+  G  +         ++  +      M+  Y
Sbjct: 254 SRVMTAEINAGTPYLMDGVAAAFIGFSVMGAGKPNAFGTFIGAVLIGILQNGLVMMSVPY 313

Query: 306 FNSLLKFDCSFNMRHTTLMV 325
           +   +       +       
Sbjct: 314 YAMDIVKGSVLALALALTYY 333


>gi|146342109|ref|YP_001207157.1| putative high-affinity branched-chain amino acid transport system
           permease [Bradyrhizobium sp. ORS278]
 gi|146194915|emb|CAL78940.1| putative high-affinity branched-chain amino acid transport system
           permease protein [Bradyrhizobium sp. ORS278]
          Length = 289

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 97/306 (31%), Gaps = 26/306 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             +       ++  + A GL++ +G +  ++L        G Y   +L +R G   +  +
Sbjct: 6   TNLFDGVAYGMLLFVLACGLAVTLGLMNFVNLAHGAFAMAGGYVCAVLVNRIGWPFFAAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++ + S   G ++     +       +  ++ S     + +       G +        
Sbjct: 66  PLAFVASAMIGALLERTLYQHLYARSHLDQVLFSIGLVFMTVATVDYIMGSS-------- 117

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                     +   +F    V    +   +++    L+  + L L +T   +  R   D+
Sbjct: 118 --RIFIKLPDVLQGQFDIFGVGIGRYRLMIIVICGLLTVGLQLVLSKTRFGSRLRAAVDD 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   L   +       FA      G+ GA  A          F     I  + +V +G
Sbjct: 176 PRAASGLGINVPQVFAFTFAFGCGLAGLGGALSAEILGL--DPYFPLKFMIYFLIVVTVG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G +S++    A+ +L                               ++   + ++++ R 
Sbjct: 234 GSSSITGPFLASLLLGIGDVAGKYYVPKLGP--------------FVIYTIMIVILIWRP 279

Query: 337 HSLLRL 342
           + L   
Sbjct: 280 NGLFGR 285


>gi|27379151|ref|NP_770680.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27352301|dbj|BAC49305.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 289

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 90/267 (33%), Gaps = 14/267 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLI 96
           +    I    Y + + GL+++ G L +++      Y +GA+     +      +  W  +
Sbjct: 8   LLVGLINGSFYALLSLGLAVIFGMLNIINFAHGALYMMGAFVAYFLLNNDYLSIGYWPAL 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V+ ++ G  GMI+    L++      +  L+++     I+        G +G+  A   
Sbjct: 68  IVAPIVVGIFGMILERTMLQWLTGLDHLYGLLLTFGIALIVQGVFQNYFGSSGLPYAIP- 126

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                              F+   ++  +V++    +  +    + +T +    R   +N
Sbjct: 127 ---------DQLKGGMNLGFMFLPVYRGWVVVFSLIVCLATWYLIEKTRLGAYLRAATEN 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                +    +       + +      +AG   A         +      I+V ++V++G
Sbjct: 178 PTLVRAFGINVPRMITLTYGLGVGLAALAGVLSAPINQV--RPLMGADLIIVVFAVVVIG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNF 303
           GM S+         L  +  L      
Sbjct: 236 GMGSIMGSIITGFALGVIEGLTKYFYP 262


>gi|187929532|ref|YP_001900019.1| inner-membrane translocator [Ralstonia pickettii 12J]
 gi|309781692|ref|ZP_07676425.1| inner-membrane translocator [Ralstonia sp. 5_7_47FAA]
 gi|187726422|gb|ACD27587.1| inner-membrane translocator [Ralstonia pickettii 12J]
 gi|308919333|gb|EFP64997.1| inner-membrane translocator [Ralstonia sp. 5_7_47FAA]
          Length = 289

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 95/305 (31%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +  + + GLS+ +G +  ++L        G Y  V+L +R G+     +P+
Sbjct: 8   LFDGLAYGSLLFLISIGLSVTMGLMNFINLAHGAFAMAGGYVCVVLMNRLGVPFLATLPI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++   G ++     +       +  ++ S     + +       G +   V      
Sbjct: 68  AFVVTAIIGFVLECTLYRRLYRASPLDQVLFSIALVFMAMAGATYVWGPSQQPVELPEM- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L   +    S +    +  +++  +  L+A +   + RT      R   DNQ+
Sbjct: 127 -------LRGQWPVFDSGLEVGRYRLFLIGVVIALTALLAWLIERTRFGAQVRASVDNQQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +       FA+ S                     F     +  + +V +GG 
Sbjct: 180 ASAGLGINVSLVFSVTFALGSGL--AGLGGGLGIDVLGLDPAFPIKYMVYFLLVVAVGGA 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  +L                               ++   + +++++    
Sbjct: 238 GSIKGTLLAALVLGVFDVAGKYY--------------VPDVGAFVIYGLMVVLLVLFPGG 283

Query: 339 LLRLR 343
           LL  R
Sbjct: 284 LLGRR 288


>gi|319780087|ref|YP_004139563.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317165975|gb|ADV09513.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 301

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/285 (12%), Positives = 78/285 (27%), Gaps = 2/285 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIP 97
           + +      +Y + A+G  +  G L   +L     +A    + ++  +     +WL L+ 
Sbjct: 8   VLNGLHSGALYALLAFGYVLTNGILHRTNLAYGALFAFCGQTMILTAAFGYQVLWLTLLA 67

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             A+   A  +   L S                       +    + +  + I       
Sbjct: 68  AVALGVVAAFLYAALISHVLSRSVFEPLADRTPNAIVVTTLGILLLLSEASRIAADTHDL 127

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
           +L   +   I F +  +      +        +    A       R++    WR + D+ 
Sbjct: 128 WLPPMLAEPIVFAQGATFKATLTLIQLIDCAVVVAAIALASWAFARSSFGRRWRAVSDDP 187

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           KA       +      A         +AG         +S         + ++ +  +GG
Sbjct: 188 KAAAMCGVDVRAVFRHAVLFGGFCAALAGVMAGLYYGNVSFGS-GLVYGLKILFVTAVGG 246

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
             S  + A   A+      L  G     +     +          
Sbjct: 247 YLSPPRAALGAAVFGMAESLWAGYFPVEWRDAWMYLFLVTTLILI 291


>gi|261405853|ref|YP_003242094.1| inner-membrane translocator [Paenibacillus sp. Y412MC10]
 gi|261282316|gb|ACX64287.1| inner-membrane translocator [Paenibacillus sp. Y412MC10]
          Length = 322

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 98/300 (32%), Gaps = 25/300 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +   +      I ++  Q+ I  + A+G++ V+   G + L+     A+ +     +   
Sbjct: 37  VLNPSFLEPLNILNLLRQVSINALIAFGMTFVI-LTGGIDLSVGSILALSSAFVANMMVA 95

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                 L I +   + G  GMI GL   K +      ATL    IF+ + +         
Sbjct: 96  GFD-PILSIIIGVALGGVMGMINGLMITKGKMAPFI-ATLATMTIFRGLTL--------- 144

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                   +Y  G  +  L     F      Y + +    + M    A + + L +T+  
Sbjct: 145 --------VYTNGNPITGLGDSLVFQLFGRGYLLGIPVPAITMIITFAVLWVILHKTSFG 196

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                I  N+KA       +   K+  ++++     +AGA   +  +   P      E  
Sbjct: 197 RKTYAIGGNEKASLVSGIKVPRVKIMIYSLAGMLSALAGAILTSRLNSAQPTAGTSYELD 256

Query: 268 IVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V     + GG   +        I+  +      +    F  ++       +    
Sbjct: 257 AIAAVVLGGTSLTGGRGRIVGTLIGVLIIGILNNGLNLLGVNSFYQMVVKGVVIAIAVLL 316


>gi|218780942|ref|YP_002432260.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218762326|gb|ACL04792.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 289

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 96/303 (31%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I+  +Y + A G S+V+G   ++++     Y   AY   +     GL   L + V
Sbjct: 6   LIDGLIKGSVYALLAIGFSLVLGVARIINIAHTALYMTSAYMIYVGTKLLGLPAILCMLV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  ++   G+++    ++   ++ A   +    +   +   +  I  G           +
Sbjct: 66  AIALTILLGLLVYNFFIRPIQEHEAAMLISTIAVGMMLQEVFLMIFGGHYLGVEPLVRGY 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +           +  +    + L              +T    A R+  ++++
Sbjct: 126 TTILGVKVTNQHLLALGLALIVLVSVRLFL-------------MKTRTGLAIRSTANDRE 172

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +        AVS     +AGA  A                I++++IV+LGG+
Sbjct: 173 VANLMGMNVTGVAFVTMAVSVGLASIAGAIVAPLVTV--EPTMWMHPLIMMLAIVVLGGL 230

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL     L   M             +            + LV+L+R   
Sbjct: 231 GSIEGSFVGAYILGFAESLVVFMVPMGSFLKDSVALT-----------IMILVLLVRPEG 279

Query: 339 LLR 341
           L  
Sbjct: 280 LFG 282


>gi|159043413|ref|YP_001532207.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12]
 gi|157911173|gb|ABV92606.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12]
          Length = 305

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 104/306 (33%), Gaps = 15/306 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + A GL++V G +GL++L     Y                +  +    
Sbjct: 10  VLNGLQFGVMLFLMAAGLTLVFGVMGLINLAHGSLYM----------VGAFAAAAVAGAT 59

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            + + G    +    +     +   I  L   +    +L  +  I     G       + 
Sbjct: 60  GSFVLGLAAALAAAAAAGALIEVTIIRRLYARDHLDQVLATFALILIFSEGTRWIFGSFP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   V + +         + Y  +   ++     ++A++   + +T I    R    +++
Sbjct: 120 LFLEVPAALSGPVTLPFGIEYPAYRLAIIGIGLAIAAALFWLIAKTRIGVQIRAGEADRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+
Sbjct: 180 MIAALGVDIDRLYTLVFALGAALAGLAGALVGALQSV--QVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335
            S+        +L     L   +    F ++L+   +    +   +  + I +  V++ R
Sbjct: 238 GSIKGAFVGALLLGLTDTLGRTLLPVAFGTVLEPSMATAVGSALASMAIYILMAGVLIFR 297

Query: 336 SHSLLR 341
              L  
Sbjct: 298 PSGLFG 303


>gi|56421762|ref|YP_149080.1| ribose ABC transporter permease [Geobacillus kaustophilus HTA426]
 gi|56381604|dbj|BAD77512.1| ribose ABC transporter (permease) [Geobacillus kaustophilus HTA426]
          Length = 314

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 102/312 (32%), Gaps = 24/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  ++L +      +     ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 16  LIGLFLLCIVLSILSDDFLTMDNWLNLLRQVSINALIAFGMTFVI-LTGGIDLSVGSVLA 74

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + ++      + I V  +   A G++ G+   K +          M+     
Sbjct: 75  LSSTITAGMMAQGVNGF-VAIFVGLLAGAAMGVLNGVLVTKGKVAPFIATLATMTAF--- 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                        G+ +        T   S    F+       + I +  +L+   +++ 
Sbjct: 131 ------------RGLTLVYTDGRPITGFASDDILFQMMGRGYFFGIPVPIILMLTVYIAL 178

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++L  ++T        I  N++A       +   K+  +A++ A   +AG    +  + 
Sbjct: 179 YVVL--KKTTFGRHTYAIGGNEEASRLSGLRVDRLKIYVYALTGALSALAGLILTSRLNS 236

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +N   F   +
Sbjct: 237 AQPTAGTAYELDAIAAVVLGGTSLSGGRGWIFGTLVGALIIGVLNNGLNLLNVSSFYQQV 296

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 297 IKGAVILLAVLL 308


>gi|86357420|ref|YP_469312.1| ribose ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86281522|gb|ABC90585.1| ribose ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 326

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 84/316 (26%), Gaps = 24/316 (7%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I     ++  L   ++     S  Y+           + A G+  V+  LG + L+   
Sbjct: 24  AIAFGCIILLLLAGSIYSRNFLSLDYLLQQLKVASFLGVIATGMMAVI-LLGQIDLSVPW 82

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
               GA       +       + IP         G+            YL I ++I++  
Sbjct: 83  VVTTGAMMACAATAYGTTGSVMAIPFGIFCGCMIGL-----VNGLSVAYLRIPSMIVTLA 137

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
              +      +  G      +                     +       +   +L    
Sbjct: 138 TNAVAQGLMVVYTGGFSPQDSASPTMRF-------------LAAGYTVPGLPNGVLVWFL 184

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +    +  L RT    +  ++ + ++A +          L AF +S     + G   A  
Sbjct: 185 IGLLAVFMLTRTTFGRSLYSVGNRERAAYMSGIDTRRVTLLAFIMSGGLSALGGVLLAGY 244

Query: 253 RDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             + S  M        + ++V     +LGG  S         ++  +  +   M      
Sbjct: 245 ASKASQSMGDSYLLPSIAAVVLGGTHVLGGKGSYLGTVAGVILITLLQSILSVMQIEEAG 304

Query: 308 SLLKFDCSFNMRHTTL 323
             L +           
Sbjct: 305 RQLIYGAVIIGMLLLY 320


>gi|318607969|emb|CBY29467.1| xylose ABC transporter, permease protein XylH [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 392

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 50/353 (14%), Positives = 100/353 (28%), Gaps = 45/353 (12%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  +AV+     F   GA  S + I ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 33  MLAAIAVIMLFFTFTTEGAYLSARNISNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 91

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA-------- 125
             +   +  I     G  + L I V+  +    G+  G      +     +         
Sbjct: 92  MGLLGGAAAIFDVWLGWPLPLTIVVTLGLGLVLGVWNGWWVAYRKVPSFIVTLAGMLAFR 151

Query: 126 -------------------------------TLIMSEIFQNILIKWKPITNGKAGIYVAD 154
                                                +   ++ +W+  ++         
Sbjct: 152 GILIGITNGTTVSPTSNAMSQIGQSYLPNGFGFGAIGLMLFVVWQWRRRSHRIRLGLPVT 211

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                 T               +     +   +L +  L  + I    RTA       I 
Sbjct: 212 APQGDVTRQTITAVIVLGAIYLLNDYRGVPTPVLILTALMLAGIFMATRTAFGRRIYAIG 271

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
            N  A       +   KL+ FA++   + MAG   ++     SP     +E   + + VI
Sbjct: 272 GNIDAARLSGVNVERTKLAVFAINGLMVAMAGLILSSRLGAGSPSAGNIAELDAIAACVI 331

Query: 275 -----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                 GG+ S++       I+  +      ++   F   +       +    
Sbjct: 332 GGTSLAGGIGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGAILLLAVWM 384


>gi|284164603|ref|YP_003402882.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511]
 gi|284014258|gb|ADB60209.1| inner-membrane translocator [Haloterrigena turkmenica DSM 5511]
          Length = 293

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/288 (11%), Positives = 87/288 (30%), Gaps = 11/288 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A G +++ G  G+L+L        GAY +VIL             +
Sbjct: 9   LITGAMISALYALIAIGFTMIFGVGGVLNLAHGALIMAGAYVFVILNR---------DVI 59

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++    ++  +           +   ++  I  + +I +                 F
Sbjct: 60  WESVALPRLVVFPVAVGVIGLASYGLYAGLVRYIEDDPVITFLATVVVATMTTEIALGIF 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +   +   +            +        +  ++ +T    +      +++
Sbjct: 120 GDQPYAYTVVSGQVGIAGTSVSYNDLAGFVLSWIAIGLLWYYITQTDGGRSILAASMSER 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   +   +   + ++    G+AG F     D+ +  +   +   +   IV++GG+
Sbjct: 180 GAQLTGVDLHSVRTRTWLIAGGLAGLAGIFLGG--DQAATPLMWLNPLALAFIIVVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            S+     A  ++     L   M    F  +L       +       +
Sbjct: 238 GSIKGSIIAAYLIGYTETLTVSMLGQSFRGILSLIILLVVLFLLPQGL 285


>gi|209546944|ref|YP_002278862.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209538188|gb|ACI58122.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 304

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/270 (12%), Positives = 85/270 (31%), Gaps = 9/270 (3%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             +    +    Y + A GLS +   + +++L         AY   +L ++ G+  +  +
Sbjct: 3   NTLIQGLLLGGYYAVIACGLSFMFSVMRIINLAHGSLAVAAAYGLWLLAAKAGIPPFAGL 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +   +    G ++    L+       +  ++ +     ++        G     +A   
Sbjct: 63  LIVLPVMAVIGWLLQRFILERSARGGTLLPILTTFGLSIVIDNLLFEQFGADTRSLAP-- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + +L          +        +++    +  ++  +L R A+  A R   ++
Sbjct: 121 -----FIGNLSYASWQLPGHIFVGKLAVMMMVTAVLVLGALQFFLSRFALGRAIRATAED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 +          A A++   IG+AGAF                + +      ++G
Sbjct: 176 PDTAGLVGIDARRVNAVATAITMVTIGIAGAFLGMRATF--SPYAGGPQLLFAFEAAVIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           G  SL        +L     L   ++   F
Sbjct: 234 GAGSLWGTLAGGIVLGLAQSLGAQLHPQGF 263


>gi|222082764|ref|YP_002542129.1| branched-chain amino acid ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221727443|gb|ACM30532.1| branched-chain amino acid ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 287

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 84/303 (27%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       I  Y         GL     + ++
Sbjct: 9   VDALAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMISGYIASYAARDLGLGYAAAVLLA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + +    + +     +       +  ++M+      +I       G     +       
Sbjct: 69  VVGTVIISIPIERLLYRRIYGAPELTQVLMTIGITFCIIGIANYVFGPTLKTIPLPSELQ 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G               F        + ++    ++ ++   + +T+     R   DN   
Sbjct: 129 G----------SVDLGFRTIGTHRIFAIVCGLIVALALWFTIEKTSFGVKLRASVDNASM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FAV+       G   A          +     +  + +V +GG  
Sbjct: 179 AAALGVRTEIVYAVSFAVAVGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  IL G+      +                        +A+  ++ +    L
Sbjct: 237 SIGGALLACLILGGIDTTGRYL--------------MPEYGEFFFYLAVIAIVCVFPRGL 282

Query: 340 LRL 342
              
Sbjct: 283 AGR 285


>gi|167563032|ref|ZP_02355948.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia oklahomensis EO147]
 gi|167570220|ref|ZP_02363094.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia oklahomensis C6786]
          Length = 311

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 106/315 (33%), Gaps = 22/315 (6%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
            + +     L+  M   GL+++   LG+L+      Y +GAY    + +    + W+ + 
Sbjct: 7   NLLNGLSYGLLLFMLCAGLTLIFSMLGVLNFAHASFYMLGAYVGFAIAAHT--NFWIALA 64

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           V+ ++ GA G +     L+       +  L+++     ++ +   +  G A +       
Sbjct: 65  VAPLVVGAFGALCERTLLRRVRASGHLDELLLTFGLAYLIAEGVKLAWGLAPLAAPVPAA 124

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
             G                  +  +  +++     +  +    LR +      R    ++
Sbjct: 125 LDGPAFTVY---------GAAFSRYRVFMMAVSVAMLGASWAGLRVSQTGLVVRAALTHR 175

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A  +L   +       FA  +A   +AG   A     +       +   +V +++++GG
Sbjct: 176 TAVEALGHDVPRVMTLVFAAGTALAALAGVIGAPLA--VIEPAMAETLGSVVFAVIVIGG 233

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT---------TLMVIAL 328
           + SL+    A+ ++          +    ++      +                +  + L
Sbjct: 234 LGSLAGALAASLVVGCAQTFATASSASLNDAAEWAGIALPDAWRALTVAQLAPLIPYLLL 293

Query: 329 FLVILMRSHSLLRLR 343
             V+  R+  L   R
Sbjct: 294 VAVLACRARGLFGER 308


>gi|27381480|ref|NP_773009.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354648|dbj|BAC51634.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 344

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 59/333 (17%), Positives = 115/333 (34%), Gaps = 32/333 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
               L  +A +  + L   +  +     I S+  Q+LI V  A+ +  ++  + L++   
Sbjct: 10  RSGRLPAVASIAAIALTFVVPWSTENPAIYSLVDQMLIAVTAAFSV-FIMLRMNLMTFAV 68

Query: 71  VIAYAIGAYSYVILGS-RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
               AIGAY+  +LG       + +L   S ++     + +G   L+  G Y  + T ++
Sbjct: 69  PTFMAIGAYTSALLGLRHGVTDVLILGACSFLVPMLFALPLGALVLRLTGVYFVLVTFVL 128

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +EI Q +L +   +T G  G+     +   G  +              +    +   +  
Sbjct: 129 TEITQLVLFETPGLTGGSNGLVGMPAVTLFGFELGDNRGVLLITIGLALAGALITSAVTL 188

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
                 +                I +N+    SL   +   K   FAV++   G+AG   
Sbjct: 189 GLRQHFA---------------AIEENELLAQSLGLVVWHYKSFGFAVAAGVAGLAGFAL 233

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           A       P  F    ++  I+ VI+GG  ++        +L+   +       Y     
Sbjct: 234 ANMLLTAHPTSFSPLSSVNYIAYVIIGGKANMLGPIVGAILLVWAGDAFAFRGEY----- 288

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                        L    + LV+L+    +L  
Sbjct: 289 ----------SQLLFGSLIVLVVLVARDGVLGT 311


>gi|224826592|ref|ZP_03699693.1| Monosaccharide-transporting ATPase [Lutiella nitroferrum 2002]
 gi|224601193|gb|EEG07375.1| Monosaccharide-transporting ATPase [Lutiella nitroferrum 2002]
          Length = 342

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/329 (13%), Positives = 96/329 (29%), Gaps = 35/329 (10%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGA-------TKSQKYIDSMGIQILIYVMFAWGLSIV 59
           RL     +L +L V+Y     L L           +     ++  Q  I ++ A G++ V
Sbjct: 25  RLYSKVGMLPVLVVLYAAFYLLTLHFSEDGSTNFITLDNSLNILRQTSINLVLASGMTFV 84

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           + + G + L+     A+ A   ++        +  L            +           
Sbjct: 85  ILTAG-IDLSVGSMLAVAAVLGMLTSLPGHAPLLALPAFIVAGLAMGVL----------- 132

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
                       +   + I    +T G           F   T         F       
Sbjct: 133 ---------NGSMVAMLGINPFVVTLGTMTALRGAAYLFADGTTVLNSDIPSFEWIGNGN 183

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              + +++     +  +    L+RT +      +  N +A       +    L  +++S 
Sbjct: 184 LFAIPWLVWLAAAVVVASWFVLKRTVLGLHIYAVGGNPQAARLTGIKVNRVLLFVYSISG 243

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIG 293
            F G+AGA  A+     + + +     +  I+ V+L      GG+ S+        I+  
Sbjct: 244 LFAGLAGAMSASRLYGANGN-WGTGYELDAIAAVVLGGTSLMGGVGSIWGTVVGALIIGV 302

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           +      +    F   +       +    
Sbjct: 303 MNNGLTILGVSSFWQYVAKGAVIVLAVML 331


>gi|319785081|ref|YP_004144557.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170969|gb|ADV14507.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 301

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 84/305 (27%), Gaps = 14/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G++++ G + L++       A   ++ +   +     ++     
Sbjct: 5   LFDALSLGSLYALGALGIALIFGVMRLVNFAHGDVIAFCVFALLWPSTDAMAIVFAGQLP 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++     +     S+                           +      +  + R   
Sbjct: 65  WYLLLPFVLLCGAGLSVLCEIVVFRRFRQANPATMMIASFALGFVIRYFLLMLFSSRPKS 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +                     +     ++    +   + L+LR+T      R   +N  
Sbjct: 125 ISLL---PELSQPVEILGARLPLLQLITIVATMVILIGLTLFLRQTRFGLEMRAAAENFS 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L        + AFA+S A        F A    +   M   S  ++     ++GG+
Sbjct: 182 MARMLGVRANRVIMGAFALSGALAAAIALIFGAQTGTLDIQM-GASIMLMAFIATVIGGL 240

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL     A  +L     +            +             +  A+ LV+L R   
Sbjct: 241 GSLGGAVLAGFLLGAASVIMQ----------VMLPIDARPFRDAFVYGAVILVLLFRPQG 290

Query: 339 LLRLR 343
           L+  R
Sbjct: 291 LIAAR 295


>gi|293190844|ref|ZP_06609006.1| ribose ABC transporter permease [Actinomyces odontolyticus F0309]
 gi|292820743|gb|EFF79705.1| ribose ABC transporter permease [Actinomyces odontolyticus F0309]
          Length = 356

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 100/313 (31%), Gaps = 15/313 (4%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
            + I+  + V+  +++     A  +   + S+    ++ +++A G+ ++V   G + ++ 
Sbjct: 19  REGIVLSVLVLLTIIMSAISPAFFTVSTLFSLLRSSIVPMIYALGV-LLVIISGGIDVSF 77

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               +  +Y+ ++     G++I L+    +         +      +      + TLI++
Sbjct: 78  AAIASFASYATIVFQLSRGINIGLV---GSFAMALAIGALLGLLNGYLISRFKLPTLIVT 134

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
              Q I   +     G   I            + S                 ++ +++  
Sbjct: 135 LGTQGIFQGFLLAYIGSKYIAQLP------EGMASASTANLVSVETSTGVALLHSMIIPA 188

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L+  I L L RT    A   I  + ++       +   ++  + ++      AG  + 
Sbjct: 189 IILAIVIALVLSRTMFGRAIYAIGGDTESAHRAGINVKRTQIWVYVIAGTLAATAGMVYM 248

Query: 251 ASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
                 +P      E  I+ ++V     I GG  S+        ++  +      +    
Sbjct: 249 ILGRSANPQELVGHELDIIAAVVLGGASIFGGRGSVRGTILGVLLVQLINNSLILIGVPS 308

Query: 306 FNSLLKFDCSFNM 318
                        
Sbjct: 309 AWQRAAVGLLLVA 321


>gi|45443142|ref|NP_994681.1| sugar transport system permease [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51598173|ref|YP_072364.1| xylose ABC transporter permease [Yersinia pseudotuberculosis IP
           32953]
 gi|108810115|ref|YP_654031.1| sugar transport system permease [Yersinia pestis Antiqua]
 gi|108813842|ref|YP_649609.1| sugar transport system permease protein [Yersinia pestis Nepal516]
 gi|145601019|ref|YP_001165095.1| sugar transport system permease protein [Yersinia pestis Pestoides
           F]
 gi|150261017|ref|ZP_01917745.1| sugar transport system permease protein [Yersinia pestis CA88-4125]
 gi|153949642|ref|YP_001403043.1| xylose ABC transporter system permease [Yersinia pseudotuberculosis
           IP 31758]
 gi|162421562|ref|YP_001608432.1| sugar transport system permease [Yersinia pestis Angola]
 gi|165926954|ref|ZP_02222786.1| putative xylose transport system permease protein XylH [Yersinia
           pestis biovar Orientalis str. F1991016]
 gi|165936869|ref|ZP_02225435.1| putative xylose transport system permease protein XylH [Yersinia
           pestis biovar Orientalis str. IP275]
 gi|166009548|ref|ZP_02230446.1| putative xylose transport system permease protein XylH [Yersinia
           pestis biovar Antiqua str. E1979001]
 gi|166213336|ref|ZP_02239371.1| putative xylose transport system permease protein XylH [Yersinia
           pestis biovar Antiqua str. B42003004]
 gi|167401606|ref|ZP_02307100.1| putative xylose transport system permease protein XylH [Yersinia
           pestis biovar Antiqua str. UG05-0454]
 gi|167421028|ref|ZP_02312781.1| putative xylose transport system permease protein XylH [Yersinia
           pestis biovar Orientalis str. MG05-1020]
 gi|167425613|ref|ZP_02317366.1| putative xylose transport system permease protein XylH [Yersinia
           pestis biovar Mediaevalis str. K1973002]
 gi|167466876|ref|ZP_02331580.1| sugar transport system permease protein [Yersinia pestis FV-1]
 gi|186897396|ref|YP_001874508.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
 gi|218931023|ref|YP_002348898.1| sugar transport system permease [Yersinia pestis CO92]
 gi|229836246|ref|ZP_04456414.1| sugar transport system permease protein [Yersinia pestis Pestoides
           A]
 gi|229839740|ref|ZP_04459899.1| sugar transport system permease protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229841824|ref|ZP_04461980.1| sugar transport system permease protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229904359|ref|ZP_04519470.1| sugar transport system permease protein [Yersinia pestis Nepal516]
 gi|45438010|gb|AAS63558.1| sugar transport system permease protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51591455|emb|CAH23126.1| ABC xylose transporter, fused permease domains [Yersinia
           pseudotuberculosis IP 32953]
 gi|108777490|gb|ABG20009.1| sugar transport system permease protein [Yersinia pestis Nepal516]
 gi|108782028|gb|ABG16086.1| sugar transport system permease protein [Yersinia pestis Antiqua]
 gi|115349634|emb|CAL22611.1| sugar transport system permease protein [Yersinia pestis CO92]
 gi|145212715|gb|ABP42122.1| sugar transport system permease protein [Yersinia pestis Pestoides
           F]
 gi|149290425|gb|EDM40502.1| sugar transport system permease protein [Yersinia pestis CA88-4125]
 gi|152961137|gb|ABS48598.1| putative xylose transport system permease protein XylH [Yersinia
           pseudotuberculosis IP 31758]
 gi|162354377|gb|ABX88325.1| putative xylose transport system permease protein XylH [Yersinia
           pestis Angola]
 gi|165915111|gb|EDR33722.1| putative xylose transport system permease protein XylH [Yersinia
           pestis biovar Orientalis str. IP275]
 gi|165921060|gb|EDR38284.1| putative xylose transport system permease protein XylH [Yersinia
           pestis biovar Orientalis str. F1991016]
 gi|165991470|gb|EDR43771.1| putative xylose transport system permease protein XylH [Yersinia
           pestis biovar Antiqua str. E1979001]
 gi|166205634|gb|EDR50114.1| putative xylose transport system permease protein XylH [Yersinia
           pestis biovar Antiqua str. B42003004]
 gi|166961157|gb|EDR57178.1| putative xylose transport system permease protein XylH [Yersinia
           pestis biovar Orientalis str. MG05-1020]
 gi|167048988|gb|EDR60396.1| putative xylose transport system permease protein XylH [Yersinia
           pestis biovar Antiqua str. UG05-0454]
 gi|167055303|gb|EDR65097.1| putative xylose transport system permease protein XylH [Yersinia
           pestis biovar Mediaevalis str. K1973002]
 gi|186700422|gb|ACC91051.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
 gi|229678477|gb|EEO74582.1| sugar transport system permease protein [Yersinia pestis Nepal516]
 gi|229691163|gb|EEO83216.1| sugar transport system permease protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696106|gb|EEO86153.1| sugar transport system permease protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229706694|gb|EEO92700.1| sugar transport system permease protein [Yersinia pestis Pestoides
           A]
 gi|262363732|gb|ACY60453.1| sugar transport system permease protein [Yersinia pestis D106004]
 gi|262367666|gb|ACY64223.1| sugar transport system permease protein [Yersinia pestis D182038]
 gi|320017361|gb|ADW00933.1| sugar transport system permease protein [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 394

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/355 (13%), Positives = 97/355 (27%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  +A++     F   GA  S + I ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 33  MLAAIAIIMLFFTFTTEGAYLSARNISNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 91

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM---- 129
             +      I     G  + L I V+  +    G   G      +     +    M    
Sbjct: 92  MGLLGGIAAIFDVWLGWPLPLTIVVTLALGLVLGAWNGWWVAYRKVPSFIVTLAGMLAFR 151

Query: 130 -------------------------------------SEIFQNILIKWKPITNGKAGIYV 152
                                                  +   +  +W+   +       
Sbjct: 152 GILIGITNGTTVSPTSNAMSQIGQSYLPSGIGFGIGAIGLMLFVAWQWRRRNHRIRLGLP 211

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                   T               +     +   +L +  L  + +    RTA       
Sbjct: 212 VAAPQGDVTRQTITAVIVLGAIYLLNDYRGVPTPVLILTALMLAGVFMATRTAFGRRIYA 271

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N  A       +   KL+ FA++   + MAG   ++     SP     +E   + + 
Sbjct: 272 IGGNIDAARLSGINVERTKLAVFAINGLMVAMAGLILSSRLGAGSPSAGNIAELDAIAAC 331

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 332 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGAILLLAVWM 386


>gi|164687108|ref|ZP_02211136.1| hypothetical protein CLOBAR_00734 [Clostridium bartlettii DSM
           16795]
 gi|164603993|gb|EDQ97458.1| hypothetical protein CLOBAR_00734 [Clostridium bartlettii DSM
           16795]
          Length = 311

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 96/312 (30%), Gaps = 25/312 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++   ++ +     ++ K   S+  Q  I  + A+G++ V+   G + L+     
Sbjct: 15  AVIALILLVAVISIISPEFRTVKNFLSLLRQSSINGLIAFGMTCVI-LTGGIDLSVGSVL 73

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       L +     + + + V+ ++    G+I G+   K R        + M+    
Sbjct: 74  ALTTAICASLIANG-TPVAIAMIVALVLGVLFGIISGIFVTKGRLQPFIATLITMTV--- 129

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                ++  G  + +L   +          + + + ++    + 
Sbjct: 130 ---------------FRGLTMIFMDGKPISNLGDSYLLKFVGKGLILNIPFPVIMFILIF 174

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L RT           N+K+       I   K++ +A+S     M+G    +   
Sbjct: 175 IGFMFILERTTFGRKVYATGSNEKSAKLAGINIDRTKIATYAISGLMAAMSGLVLLSRLG 234

Query: 255 RISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P +    E   + ++ +      GG   +        I+  +      +    +   
Sbjct: 235 SAQPTLGTGYELDAIAAVALGGVSMNGGRGRIWGTFVGVLIIAVLNNGLNILGVSSYYQD 294

Query: 310 LKFDCSFNMRHT 321
           +       +   
Sbjct: 295 VVKGLVILIAVL 306


>gi|138896808|ref|YP_001127261.1| ribose ABC transporter permease [Geobacillus thermodenitrificans
           NG80-2]
 gi|196250383|ref|ZP_03149075.1| Monosaccharide-transporting ATPase [Geobacillus sp. G11MC16]
 gi|134268321|gb|ABO68516.1| Ribose ABC transporter (permease) [Geobacillus thermodenitrificans
           NG80-2]
 gi|196210042|gb|EDY04809.1| Monosaccharide-transporting ATPase [Geobacillus sp. G11MC16]
          Length = 314

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 91/312 (29%), Gaps = 24/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  ++L +      +     ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 16  LIGLALLCIVLSILSEDFLTMNNWLNLLRQVSINALIAFGMTFVI-LTGGIDLSVGSVLA 74

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     L ++      L I +  +     G++ G+   K R                 
Sbjct: 75  LSSAITAGLMAQGVDGF-LAILIGLLSGTVMGVLNGIIITKGRVAPFIAT---------- 123

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L                  +    +         R     V         ++ M  +  
Sbjct: 124 -LATMTAFRGLTLVYTDGRPITGFASDDIMFQMMGRGYFFGVPVP------IVLMLVVYI 176

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + + L++T        I  N++A       +   K+  +A++     +AG    +  + 
Sbjct: 177 VLYVVLKKTTFGRHTYAIGGNEEASRLSGLRVDRLKIYVYALTGTLSALAGLILTSRLNS 236

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +N   F   +
Sbjct: 237 AQPTAGTAYELDAIAAVVLGGTSLSGGKGWIFGTLVGALIIGVLNNGLNLLNVSSFYQQV 296

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 297 IKGAVILLAVLL 308


>gi|86749877|ref|YP_486373.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86572905|gb|ABD07462.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 335

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 100/334 (29%), Gaps = 40/334 (11%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI--------------- 83
           I +   +   Y + A GL++  G+LG+++      + +GA+  V+               
Sbjct: 8   ILNGLDKGGAYALIALGLTLAFGTLGVVNFAHGALFMLGAFCAVVFNKLLTLEIVKVDPT 67

Query: 84  --------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                                    ++   ++ +     I  +  +    +   I     
Sbjct: 68  RTTPWGSPLEVKTPYVQAMLGDWGKILIDYSVPASILLAIPVMLLIGIIIERGLIRFFYK 127

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 IL+ +      +  +        +  +   +       +  ++Y  +    L  
Sbjct: 128 RPHADQILVTFGLAIVLQEIVKHFFGANPIAQSAPQIFSGSLQLTEAIVYPYWRIVYLAF 187

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              + A++  +L+ T      R    +++    L   I       F +++   G+AG  +
Sbjct: 188 SLAVIAAVFAFLQLTTFGMVVRAGMQDRETVGLLGINIERRFTIVFGLAAVVAGLAGVMY 247

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                        F     V+ +V    M SL     A  +L  +           F S+
Sbjct: 248 TPIVPPDYHMGMDFLVLSFVVVVVGG--MGSLPGAVLAGFLLGILQS---------FASM 296

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            +           ++ +   +++L+R   LL  +
Sbjct: 297 NEVKSLVPGIDQIIIYLVAVVILLVRPRGLLGRK 330


>gi|107022615|ref|YP_620942.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054]
 gi|116689564|ref|YP_835187.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
 gi|105892804|gb|ABF75969.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054]
 gi|116647653|gb|ABK08294.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
          Length = 345

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 96/311 (30%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +V  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 46  VLLVLCVGFGFLTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 104

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A + +I  +  G   WL +P + ++    G I G      R     +    M+       
Sbjct: 105 AVAALIASTIPGW-GWLGVPFALVVGLVFGAINGGLISFLRLPPFIVTLGAMT------A 157

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++      G        +L               F        + + ++++  C + A  
Sbjct: 158 VRGVARLIGNDTTVFNPQLP--------------FAFIGNGSILGVPWLVVIACAVIAIS 203

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   ++  +A S    G+     AA     +
Sbjct: 204 WFILRRTVLGMRIYSVGGNPEAARLSGINVRAIQMFVYAASGLLAGLGAVMSAARLYAAN 263

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 264 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLTNGLVLLGVSDIWQYII 323

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 324 KGLVIIGAVAL 334


>gi|310830170|ref|YP_003965270.1| inner-membrane translocator [Ketogulonicigenium vulgare Y25]
 gi|308753076|gb|ADO44219.1| inner-membrane translocator [Ketogulonicigenium vulgare Y25]
          Length = 287

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 85/300 (28%), Gaps = 26/300 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               ++  + + GLS+ +G +  ++L       +G Y         G      +  +  +
Sbjct: 12  LAYGMVLFVISIGLSVTMGLMKFVNLAHGAFAMLGGYIASYATQSLGWHFGFALLAAVAL 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                + +     +       +  ++M+     ++I       G     +A      G  
Sbjct: 72  CMILAVPLERFLYRRFYGASELRQVLMTIGLTFMMIGIANWLMGPTLKTIALPPSLQGP- 130

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                        F  +     +        +  + L + RT      R   D+ K   +
Sbjct: 131 ---------VDIGFRSFPAHKIFAAAVGLITALGLWLLIERTFFGVKLRAAVDDAKMAEA 181

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L          +FA++     M G   A          +     +  + +V +GG  S+ 
Sbjct: 182 LGIRTKAVYAISFALAIGLAAMGGVVGAQLLPI--EPQYALHHMVTFLVVVCVGGAGSIG 239

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A  IL  V      +   + N                  +A+  ++ M  + L+  
Sbjct: 240 GALAACLILGMVKTTGAYLWPEFGN--------------FFFYLAVIAIVSMLPNGLMGR 285


>gi|222102248|ref|YP_002546838.1| ribose ABC transporter, permease protein [Agrobacterium radiobacter
           K84]
 gi|221728365|gb|ACM31374.1| ribose ABC transporter, permease protein [Agrobacterium radiobacter
           K84]
          Length = 322

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 103/313 (32%), Gaps = 25/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  V+  ++L +      S   + ++  Q+ I  + A G++ V+ + G + L+     
Sbjct: 22  IVISFVLLFVILSVASPNFLSANNLLNVLRQVSINGVLAVGMTFVILTAG-IDLSIGSIL 80

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       L +        +  V+ +  GA   ++             + TL M  + +
Sbjct: 81  ALSGAVAASLVTGPDALNPFVGVVAGLGVGAICGVVNGTLTAHFRVPAFVTTLGMLSVAR 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +                 L+  G  + +L   FR+    +++ + +  ++  + F  
Sbjct: 141 GATL-----------------LFSGGRPIPNLSTDFRWLGQGLLFGMPVPVIIFAIVFAI 183

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           ++++L  R +        +  N ++  +          S + +  A  G+AG    A   
Sbjct: 184 SAVVL--RYSIYGRRIYAVGGNPRSAKTSGINTSGIIFSVYVIMGALAGLAGVMLTARTT 241

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG+  +        I+  +      M    +   
Sbjct: 242 SALPQAGIGYELDAIAAVVIGGTSLTGGVGRIGYTLVGVLIIGMISNGLDLMGVSSYYQQ 301

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 302 IIKGSIIVLAVLI 314


>gi|119511899|ref|ZP_01630998.1| inner-membrane translocator [Nodularia spumigena CCY9414]
 gi|119463467|gb|EAW44405.1| inner-membrane translocator [Nodularia spumigena CCY9414]
          Length = 288

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 85/302 (28%), Gaps = 26/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      I  + A GL++  G L L +        +GAY  +++ +        +I  
Sbjct: 9   IVNGIAVGSIIALAAVGLTLTYGILRLSNFAHGDFLTLGAYLTLLVNAGGINIWLSMILA 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +     A  +   L   + R       TLI+  I   + ++   I               
Sbjct: 69  AVGTVAAMLLSEKLLWSRMRSIRATSTTLIIISIGLALFLRNGIIFLWGGQNQNYKLPVT 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +        VL        ++   L+ T I  A R + D+  
Sbjct: 129 -----------TALDIFGIRVPQNQLLVLGLAVGAILALHYLLQNTKIGKAMRAVADDID 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   +    L  + ++  F  + G+ +             +   + + + VILGG+
Sbjct: 178 LARVSGINVEQVILWTWIIAGTFTSLGGSMYG--LITAVRPNMGWFLILPLFASVILGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +                             L      +     + ++ + LV+ +R   
Sbjct: 236 GNPY-------------GAIAAAFIIGIAQELSTLWIGSQYKQGIALLMMILVLFIRPKG 282

Query: 339 LL 340
           L 
Sbjct: 283 LF 284


>gi|327539057|gb|EGF25690.1| ribose transport system permease protein rbsC [Rhodopirellula
           baltica WH47]
          Length = 323

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/317 (11%), Positives = 88/317 (27%), Gaps = 26/317 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   V  + +     +  + +   ++  QI + +  + G+++++   G + L+     A
Sbjct: 15  LIALAVMLIAMSFLSDSFFTPENGLNILRQISVNLSLSIGMTLII-LTGGIDLSVGAILA 73

Query: 76  IGAYSYVILGSRYGLSIWLLI-----PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           +       L     +   L +        A++SG                   +   + +
Sbjct: 74  LSGAVAAGLLKNGIMLEPLGVKLEFTVFGAIVSGLLVGSAAGLFNGVAVTRFKLPPFVAT 133

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
               +I      +  G                         F S      + +   +   
Sbjct: 134 LGMFSIARGLTMLWTGG---------------FPVTGLGSSFGSIGTGVFLQIPVPVWIT 178

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L    +L  R T        +  N++A       +   K++ + +     G+AG    
Sbjct: 179 GALVGVFVLLTRTTRFGRHVYAVGGNERASLLTGLPVDRIKVAVYTLGGLLAGVAGLIVT 238

Query: 251 ASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A  D   P+     E   + ++VI      GG  S+        I+  +      +N   
Sbjct: 239 ARLDSAQPNAGLGYELDSIAAVVIGGTSLSGGRGSVMGTVLGCLIIGVLNNSLFLLNVSP 298

Query: 306 FNSLLKFDCSFNMRHTT 322
           F   +            
Sbjct: 299 FWQQVVKGFVILAAVAV 315


>gi|325674005|ref|ZP_08153695.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Rhodococcus equi ATCC
           33707]
 gi|325555270|gb|EGD24942.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Rhodococcus equi ATCC
           33707]
          Length = 291

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 85/311 (27%), Gaps = 23/311 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
               +   +       + + A G+ +VV      +          A +   +   +G+ +
Sbjct: 1   MTDPQLWLAALEIGAFFSLIALGMYLVVVGADFFNFAMGPYAMAAAMACSFVVVDHGVPL 60

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           WL + +   +  A  +I     ++          L        +L   + +     G   
Sbjct: 61  WLALLLGLAVGMALSVITEKLVVQQVQKRSGRGELPALVAVTAVLFAVQQLAGTIFGRTP 120

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                           F          +     +++G   +   + LWL+ T      R 
Sbjct: 121 LPGQKLFD--------FQPITVVGATVDSSSIVLVVGTVVVFVVVGLWLQATQTGRLLRA 172

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           + DN +A   L   +   +L AF V+     +AG  FA             S  +     
Sbjct: 173 VGDNPEAARILGLPVNRVRLVAFTVAGLIAAIAGLLFAPKAGV--QFTSGLSWTLTAFIA 230

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           +++GG            +L  V                           T +++   +  
Sbjct: 231 LVIGGTGRSWAPLIGGLLLGFVQVFAPYYFGA-------------SAAQTAILLIALVFF 277

Query: 333 LMRSHSLLRLR 343
             R   LL  +
Sbjct: 278 AFRPEGLLSRK 288


>gi|260425497|ref|ZP_05779477.1| urea ABC transporter, permease protein UrtB [Citreicella sp. SE45]
 gi|260423437|gb|EEX16687.1| urea ABC transporter, permease protein UrtB [Citreicella sp. SE45]
          Length = 297

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 96/292 (32%), Gaps = 16/292 (5%)

Query: 55  GLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
           GLSI  G++G++++       IGAY+ V+ G    L+ +L +P++  +S   GM +    
Sbjct: 21  GLSITYGAMGVINMAHGELVMIGAYTAVLSGIYLNLNFFLALPLAFAVSALVGMALERLV 80

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF-FRFP 173
           ++     +    L    +   +    +            + L     ++         F 
Sbjct: 81  IRRLYGRIIDTLLATWGVAIVLQQLIRLEFGLSFFGIHVEGLGPGLQSMDVPSFLTQPFE 140

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
              V  + +  ++++    L+      + RT++    R I  N +   +    +      
Sbjct: 141 IGGVPIQPYRSFIIVVTLLLTLLTWFVMYRTSMGTQVRAIMRNPQIAAACGIDVRRVSAF 200

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            FA  S   G+AG   A  +  +         +  ++ +V                +   
Sbjct: 201 TFAYGSGLAGVAGVLLAGFKTVMPDMGASTVVDGFLVVVVG--------------GVGSL 246

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           +  +         N +     +  +    +  +    +IL R   L   R+ 
Sbjct: 247 LGTVLASGLLGQINGVFAILFNDILARAVVFGVV-IAIILWRPRGLFSFRSR 297


>gi|154244842|ref|YP_001415800.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154158927|gb|ABS66143.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 290

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 80/301 (26%), Gaps = 27/301 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                IY + A G +++  +  +++        IG  + V L S                
Sbjct: 12  LTVGAIYALIALGFTLIYNASDVINFAQGDFVMIGGMATVFLMSAGLALPVAAFIAVVAS 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
            G   ++        RG       +I       I    + +                  +
Sbjct: 72  VGVGLLLHRFAIEPARGASPVTLIMITIGASIFIKGVAQIV------------FDKQFHS 119

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           + +       P           +VL     L  ++ L+L  T    A      N+ A   
Sbjct: 120 LPAFSGDAPIPVGGATLLPQSLWVLGTTLGLVVALYLFLEHTLSGKALLATAANRLAARL 179

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +      AF +S+A   +AG         ++         +   +  +LGGM +  
Sbjct: 180 VGINVTLILAMAFGLSAAIGALAGVVATP--ITLTRYDIGTLFALKGFAAAMLGGMGNPV 237

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  ++  +     G     +   + F             + +  V+      L   
Sbjct: 238 GAVVGGLLIGLLETFGAGYVSSTYKDAVAF-------------LMILFVLFFLPRGLFGG 284

Query: 343 R 343
           R
Sbjct: 285 R 285


>gi|253573978|ref|ZP_04851320.1| ABC-type ribose transport system [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251846455|gb|EES74461.1| ABC-type ribose transport system [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 319

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/314 (12%), Positives = 103/314 (32%), Gaps = 31/314 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  + L +F     +   + ++  Q+ I  + A+G++ V+   G + L+    +A
Sbjct: 22  LIGLALIMIALSIFADNFLTVNNLLNVLRQVSINALIAFGMTFVI-LTGGIDLSVGSIFA 80

Query: 76  I-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           +  A +  ++       + + + +++  +      + +   +     + +AT+ +     
Sbjct: 81  LSSALTAGLMAGGMNTWLAVAVGIASGAAMGAVNGLIVAKGRLAPFIVTLATMTIYRGLT 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +    KPIT                           F      Y + +   ++ M    
Sbjct: 141 LVYTDGKPITG----------------------LNKDFALLGKGYFLQIPTPIIWMVLAF 178

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A + + L+ T        +  N++A +    +    KL  +++S     ++G    +  +
Sbjct: 179 AVVYIILKHTTFGRRVYAVGSNEEATWLSGISTSKVKLLVYSISGLLASISGLILTSRLN 238

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              P     S  +  I+ V+LGG         +        I+  +      +N   F  
Sbjct: 239 SAQPTA-GVSYELDAIAAVVLGGTSLSGGKGWIVGTLIGAVIIGVLNNGLNLLNVSSFYQ 297

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 298 QVVKGAVILIAVLL 311


>gi|226357989|ref|YP_002787729.1| ribose/xylose/arabinose/galactoside ABC transporter, permease
           component [Deinococcus deserti VCD115]
 gi|226320232|gb|ACO48225.1| putative ribose/xylose/arabinose/galactoside ABC transporter,
           permease component [Deinococcus deserti VCD115]
          Length = 330

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 96/303 (31%), Gaps = 24/303 (7%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI-GAYSYVILG 85
            LF     + + ++    Q+   V+ A G+++V+   G + L+     AI GA + ++  
Sbjct: 42  ALFTPNFLTPQTLNVNLTQVATTVIVAVGMTLVIA-TGGIDLSVGALMAISGALAPMLFL 100

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
                S  L + ++ ++        GL +      +     +    +F       + ITN
Sbjct: 101 HPPFGSPALGLALAFVLPVLAAGAFGLFNGTLVARFNIQPFIATLILFIAGRGIAQVITN 160

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G+   +                    F    +   + + + ++ M  +       +RRT 
Sbjct: 161 GQLQTFSHP----------------GFQYIGLGRPLGIPFQVILMVLVVGLFAWVMRRTV 204

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
                  +  N+ A       +   KL+ + ++    G+AG    A       +    + 
Sbjct: 205 FGRQVLAVGGNEAAARLAGVPVGRVKLAVYGITGLLAGLAGLIVIAINASSDANQVGLNM 264

Query: 266 NIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            +  I+ V +      GG  ++        I+  +             +L+       + 
Sbjct: 265 ELDAIAAVAVGGTVLTGGRATIIGTLIGALIIQLIRYTLLARGVPEAVALVVKAIIILVA 324

Query: 320 HTT 322
              
Sbjct: 325 VYI 327


>gi|261867411|ref|YP_003255333.1| monosaccharide-transporting ATPase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412743|gb|ACX82114.1| monosaccharide-transporting ATPase [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 342

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/325 (11%), Positives = 99/325 (30%), Gaps = 8/325 (2%)

Query: 3   IFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
           +FSL+       + L+     L +     A  S   I ++ +Q+ +  + + G++ V+  
Sbjct: 1   MFSLKKIISKLGIGLVLFFMILGMSFTSEAFLSTNNIFNILLQVSVICVISVGMTYVI-L 59

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G + L+     A+ A    +        +        +       ++G   +     Y+
Sbjct: 60  TGGIDLSVGSIVALSAVCLGLFTHWGVALLGENPTEPMLSIVVIVSVLGSIGVGALCGYV 119

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
               ++  ++     I    +     G+ +              +RFF      + Y   
Sbjct: 120 NGVIIVYGKVTS--FITTLGMMGIARGLALTLSNGKTIYNFPEALRFFGNGRLNITYGFG 177

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +   ++    +       L +T        +  N++A       +   ++  + ++ A  
Sbjct: 178 IPIPVIIALIVVLISFYILTQTVFGRQVYALGGNREAVRLSGINVNKLEIKTYVINGALA 237

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVEL 297
            +         +   P      E   + + VI     +GG+ S+   +    I+  +   
Sbjct: 238 AIGAVILVGRLNAAQPIAGTGYELDAIAATVIGGTSLMGGVGSVISTSIGALIMGVLQNG 297

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTT 322
              +N   +   L       +    
Sbjct: 298 LTLLNVTSYLQRLIIGLVIILAVFL 322


>gi|192292198|ref|YP_001992803.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|192285947|gb|ACF02328.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 335

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 106/334 (31%), Gaps = 40/334 (11%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-------------- 84
           I +   +   Y + A GL++  G+LG+++      + +GA+  V+               
Sbjct: 8   ILNGLDKGGAYALIALGLTLAFGTLGIVNFAHGALFMLGAFCAVVFNKLLTLEIVRVDPT 67

Query: 85  -GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
             + +G  + +  P    + G  G  +   S+           L++    +  LI++   
Sbjct: 68  RMTPWGSPMEIKTPYVQAMLGDWGKFLIDYSVPVSILLAIPVMLLIGIAIERGLIRFFYK 127

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF--------------VIYEIFMYYVLLG 189
                 I V   L  +   +          +                ++Y  +    L  
Sbjct: 128 RPHADQILVTFGLAIVLQEIVKNFFGANPIAQSAPQIFSGSLQLTETIVYPYWRIVYLAF 187

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              + A++  +L+ T      R    +++    L   I       F +++   G+AG  +
Sbjct: 188 SLVVIAAVFAFLQFTTFGMVVRAGMHDRETVGLLGINIERRFTIVFGLAAVVAGLAGVMY 247

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                        F     V+ +V    M SL     A  +L  +           F S+
Sbjct: 248 TPIVPPDYHIGMDFLVLSFVVVVVGG--MGSLPGAVLAGFLLGILQS---------FASM 296

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            +           ++ +   +++L+R   LL  +
Sbjct: 297 NEVKSLVPGIDQIIIYLVAVVILLVRPRGLLGRK 330


>gi|115526223|ref|YP_783134.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115520170|gb|ABJ08154.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 297

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 101/306 (33%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A    ++  +  +++        +GA+    L +++ +  +  +P+
Sbjct: 10  LVNGLVVGTLYGVVAMSFVLIYKATQVVNFAQGELLLVGAWVCWALLTKFQIPFYFGMPI 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +     A G+++ +  L+       I+ ++++     +         G +          
Sbjct: 70  TLAFMFAFGILVQIIFLRPMIGEPIISVIMVTIALSTVFQAALKWMFGTSPQPFPPIFES 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                           + +  +      L+    +   +  + R +    A R    NQ+
Sbjct: 130 QSVHF-----------AGLQIQTVYVMSLVVSVAMMIGMAWFFRVSKYGLAMRATAFNQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  ++      A+A+S+    +AG   A      S         I V    ILGG+
Sbjct: 179 VAQSLGISVKSVFAMAWAISATVSAVAGVVVAVVNGVSSGLSAY---GIKVFPAAILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +      ++  Y +            +       L ++++++ + 
Sbjct: 236 DSIGGAVLGGIIIGLLENFAQFIDSEYLHW--------GNLYEVAPFYVLIIILMIKPYG 287

Query: 339 LLRLRT 344
           L   + 
Sbjct: 288 LFGTKD 293


>gi|295097599|emb|CBK86689.1| autoinducer 2 ABC transporter membrane protein [Enterobacter
           cloacae subsp. cloacae NCTC 9394]
          Length = 343

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 89/301 (29%), Gaps = 27/301 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             L  +    +L     +  S + +  +     I ++ A G ++V+     + ++     
Sbjct: 12  AFLAILALFAVLVALNPSYLSLQTLGMIFASAQILILLAIGAALVM-LTRNIDVSVGSTV 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A +  +     G S+ + I  +  I    G   G   +  R                
Sbjct: 71  GLSAIAVGV-ALNGGYSLPVSILFALSIGALAGAFNGFLVVGLRIPA------------- 116

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             ++          G  +          +   ++    P++  I  + M  +++      
Sbjct: 117 --IVATLGTLGLYRGAMLLWTGGKWIEGLPPGLKSLSEPAAVGISPLGMLVLIIAATGGW 174

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                   RTA    +  + DN  A   L   +   ++ AF ++      AG  FA+   
Sbjct: 175 TL-----SRTAFGRDFYAVGDNLAAARQLGVAVNRTRMIAFTLNGMLAACAGIVFASQIG 229

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +        E   + + V     +LGG  +L         L  +  +        + + 
Sbjct: 230 FVPNQTGSGLEMKAIAACVLGGISLLGGTGTLVGALLGAFFLTQIDTVLVLFRLPAWWND 289

Query: 310 L 310
            
Sbjct: 290 F 290


>gi|225569565|ref|ZP_03778590.1| hypothetical protein CLOHYLEM_05659 [Clostridium hylemonae DSM
           15053]
 gi|225161773|gb|EEG74392.1| hypothetical protein CLOHYLEM_05659 [Clostridium hylemonae DSM
           15053]
          Length = 315

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 50/311 (16%), Positives = 97/311 (31%), Gaps = 28/311 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ +V  +   +      +   I S+  Q+ +Y + + G++ V+  LG + L      
Sbjct: 14  IWVVFLVLVIAFTIANPRFINPSNIFSLLRQVSMYGIASIGMTFVI-LLGDIDLATGSIM 72

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           +        L    G+++WL I V+ ++S   G++ G          L            
Sbjct: 73  SFVNIVCAYLMVNMGVNMWLAILVTLVVSTLIGVLNGFMVSTIGIPALIATF-------- 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                             A   Y L   +        F      Y   +   ++ M    
Sbjct: 125 ------------ATQTAFAGFAYILSGGLPINGFTDGFRIIGQGYVSVVPVPVIIMIVCF 172

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     L +T     +  +  N  A       +   K   FA+S  F G+AG    +  +
Sbjct: 173 AVGSFILNKTYFGRYFYAVGGNVDAARLSGIRVGRIKYLVFAISGFFAGLAGIVMLSRTN 232

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                         VI+ V+LGG+        +S +   T I+  +      MN   +  
Sbjct: 233 S-GMPNAGLGYEFKVITCVVLGGVSVTGGYGKISGVVAGTFIIGALTNGMVLMNINSYIQ 291

Query: 309 LLKFDCSFNMR 319
            +       + 
Sbjct: 292 DVVMGVVLALA 302


>gi|209520950|ref|ZP_03269688.1| Monosaccharide-transporting ATPase [Burkholderia sp. H160]
 gi|209498630|gb|EDZ98747.1| Monosaccharide-transporting ATPase [Burkholderia sp. H160]
          Length = 345

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 95/293 (32%), Gaps = 27/293 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +   +L  L      +     ++  QI   V+ + G++ V+   G + L+     
Sbjct: 45  LAGALLAMIVLFSLLSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAG-IDLSVGSVL 103

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GA    ++  ++G        +   ++   G + G  ++ +R     ++  ++     
Sbjct: 104 ALGASVVSVVTLKWGWGPAAGALLGVAVAALTGTVTGAVTVGWRIPSFIVSLGVLEA--- 160

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                             A  L +  T  R+      F        + +    L    + 
Sbjct: 161 ------------------ARGLAYQMTNSRTAYIGDAFDFLSNPIALGISPAFLIAVAVM 202

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L RT        I  N++A           K+  FA+  A  G+A  F  +  +
Sbjct: 203 VIAQLVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKVIVFALMGALSGLAALFQISRLE 262

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
              P+     E  ++ ++VI     +GG  S+        I+  +      + 
Sbjct: 263 AADPNAGVGVELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIG 315


>gi|160898751|ref|YP_001564333.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160364335|gb|ABX35948.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 454

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/328 (14%), Positives = 112/328 (34%), Gaps = 18/328 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L      L  +      +     +M  QI   ++     +I++G  G+LS    +   +
Sbjct: 40  ILIWGAFALALIVAPLVFTSSLALTMLSQIGYLIIICLSYNILLGQGGMLSFGHAVYTGL 99

Query: 77  GAYSYVILGSR-----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           G++  +   +R     +G+ + L+  +  +       ++G  + K  G   A+ T+ + E
Sbjct: 100 GSFIAIHAMNRASSGDWGIPLVLIPIIGGLGGMFFAALLGYVTTKKSGTTFAMITMGIGE 159

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +  ++ + +     G+ GI                +    F        + +YY++   C
Sbjct: 160 LVASMALMFPEFFGGEGGIT------------TDRVYGKPFFGLTFGSGMEVYYLIAAYC 207

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           F+  + +     T +      +RDN +    +       +  +F ++  F G+ G   A 
Sbjct: 208 FICTAAMFAFTGTPLGRMLNAVRDNPERVEFVGYNTQRVRYFSFIIAGFFAGVGGGLAAI 267

Query: 252 SRDRIS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           + + I+  D      +   +    LGG T          +L+    L   +   +   L 
Sbjct: 268 NFEIITAMDSVSVMRSGSYLLFTFLGGATFFFGPIIGAVLLVLASVLLSELTKAWLLYLG 327

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHS 338
                  M     +   + + + +    
Sbjct: 328 LVFLLMVMYAPGGVASLIMMNLRVARFG 355


>gi|22125584|ref|NP_669007.1| D-ribose high-affinity transport system [Yersinia pestis KIM 10]
 gi|45442104|ref|NP_993643.1| putative sugar transport system, permease [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51596854|ref|YP_071045.1| ABC sugar (sorbitol) transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|108807989|ref|YP_651905.1| putative sugar transport system, permease [Yersinia pestis Antiqua]
 gi|108812255|ref|YP_648022.1| sugar transport system, permease protein [Yersinia pestis Nepal516]
 gi|145599192|ref|YP_001163268.1| sugar transport system, permease protein [Yersinia pestis Pestoides
           F]
 gi|149365592|ref|ZP_01887627.1| putative sugar transport system, permease protein [Yersinia pestis
           CA88-4125]
 gi|153948349|ref|YP_001400487.1| ribose ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|162419177|ref|YP_001606248.1| ribose ABC transporter permease [Yersinia pestis Angola]
 gi|165925623|ref|ZP_02221455.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165937637|ref|ZP_02226199.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008105|ref|ZP_02229003.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166213787|ref|ZP_02239822.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167399331|ref|ZP_02304855.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167422296|ref|ZP_02314049.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167426958|ref|ZP_02318711.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167466410|ref|ZP_02331114.1| ribose ABC transporter, permease protein [Yersinia pestis FV-1]
 gi|170023854|ref|YP_001720359.1| monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|186895935|ref|YP_001873047.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
 gi|218929588|ref|YP_002347463.1| putative sugar transport system, permease [Yersinia pestis CO92]
 gi|229838032|ref|ZP_04458191.1| putative sugar transport system, permease protein [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229898592|ref|ZP_04513737.1| putative sugar transport system, permease protein [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229902591|ref|ZP_04517708.1| putative sugar transport system, permease protein [Yersinia pestis
           Nepal516]
 gi|270490230|ref|ZP_06207304.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
 gi|294504251|ref|YP_003568313.1| putative sugar transport system, permease protein [Yersinia pestis
           Z176003]
 gi|21958488|gb|AAM85258.1|AE013771_13 D-ribose high-affinity transport system [Yersinia pestis KIM 10]
 gi|45436967|gb|AAS62520.1| putative sugar transport system, permease protein [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51590136|emb|CAH21773.1| putative ABC sugar (sorbitol) transporter, permease subunit
           [Yersinia pseudotuberculosis IP 32953]
 gi|108775903|gb|ABG18422.1| sugar transport system, permease protein [Yersinia pestis Nepal516]
 gi|108779902|gb|ABG13960.1| putative sugar transport system, permease protein [Yersinia pestis
           Antiqua]
 gi|115348199|emb|CAL21127.1| putative sugar transport system, permease protein [Yersinia pestis
           CO92]
 gi|145210888|gb|ABP40295.1| sugar transport system, permease protein [Yersinia pestis Pestoides
           F]
 gi|149292005|gb|EDM42079.1| putative sugar transport system, permease protein [Yersinia pestis
           CA88-4125]
 gi|152959844|gb|ABS47305.1| ribose ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|162351992|gb|ABX85940.1| ribose ABC transporter, permease protein [Yersinia pestis Angola]
 gi|165914387|gb|EDR33002.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922732|gb|EDR39883.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992487|gb|EDR44788.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166204961|gb|EDR49441.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166958802|gb|EDR55823.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167051835|gb|EDR63243.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167054060|gb|EDR63888.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169750388|gb|ACA67906.1| Monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|186698961|gb|ACC89590.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
 gi|229680038|gb|EEO76137.1| putative sugar transport system, permease protein [Yersinia pestis
           Nepal516]
 gi|229688140|gb|EEO80211.1| putative sugar transport system, permease protein [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229694398|gb|EEO84445.1| putative sugar transport system, permease protein [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|262362370|gb|ACY59091.1| putative sugar transport system, permease protein [Yersinia pestis
           D106004]
 gi|262366323|gb|ACY62880.1| putative sugar transport system, permease protein [Yersinia pestis
           D182038]
 gi|270338734|gb|EFA49511.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
 gi|294354710|gb|ADE65051.1| putative sugar transport system, permease protein [Yersinia pestis
           Z176003]
 gi|320014671|gb|ADV98242.1| putative sugar transport system, permease protein [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 330

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 94/312 (30%), Gaps = 27/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  VV  +L+     +  +   + ++  Q+ I  + A G++  +   G + L+     A
Sbjct: 35  FIGFVVLFVLMSGLNDSFLTVNNLTNVARQVSINAIIAVGMTCAI-LTGGIDLSVGPVMA 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L         L +  + ++    G+  G      R   + +    M      
Sbjct: 94  LSGSIAAGLMLAGIPIP-LAMMAALLVGALFGLANGSCIAYLRMPPIIVTLASMGIA--- 149

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                               LY  G  +  L   F F     +  I +  +++   +L A
Sbjct: 150 ---------------RGLALLYTGGYPISGLPDMFSFFGRGTVLGIQVPILIMAGVYLFA 194

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I+L     +       I  N++A       +   K+  + VS     +AG    +    
Sbjct: 195 WIMLNHL--SFGRYIYAIGGNEEAARLSGIRVSRYKMLVYVVSGLTAALAGLVLTSRLMS 252

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P+  +  E   + ++V     I GG  ++        +L  +      M+   +   +
Sbjct: 253 GQPNAGEGFELDAIAAVVLGGAAISGGKGAIIGTLVGAMMLGVLNNGLNLMSVSPYIQNV 312

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 313 VKGGIILAAIYL 324


>gi|294638195|ref|ZP_06716449.1| ABC transporter, membrane spanning protein [Edwardsiella tarda ATCC
           23685]
 gi|291088631|gb|EFE21192.1| ABC transporter, membrane spanning protein [Edwardsiella tarda ATCC
           23685]
          Length = 329

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 92/313 (29%), Gaps = 20/313 (6%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +++  L LL V   L L L      S   +  +     I  + A GL  VV   G + ++
Sbjct: 12  RHEAYLGLLVVALALGLTLTTDEFFSLGNLTDVATSYAILGILACGL-FVVLIAGGIDIS 70

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                AI  Y        +G S  L   ++  +    G+  G      R   + I     
Sbjct: 71  FPAMTAIAQYVMASWIITHGGSFPLAFALAIAVGLLLGLCNGFLVYWLRVPAIIIT---- 126

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                   I    +  G           +           +   ++   Y+  +   LL 
Sbjct: 127 --------IATLNLYYGLLVYLTKGTWLYGFPDWFMEGVNYFSFTASDGYDYGLTLPLLC 178

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +    A   L +  T +      +  N+ A   L   ++      +       G+A    
Sbjct: 179 LGGTIALTALLMNYTRLGRQIYAMGGNRDAASRLGMNLLRLHFYVYGYMGILAGVAAVVQ 238

Query: 250 AASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNF 303
           A     ++P+       + V++ V+L      GG  +L+       +L  +      +  
Sbjct: 239 AQITQSVAPNSL-LGFELTVLAAVVLGGTSMSGGRGTLTGTLLGVILLAFLQNGLTLLGV 297

Query: 304 YYFNSLLKFDCSF 316
             +   +      
Sbjct: 298 SSYWHTVLSGVII 310


>gi|188587333|ref|YP_001918878.1| inner-membrane translocator [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179352020|gb|ACB86290.1| inner-membrane translocator [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 290

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/303 (10%), Positives = 89/303 (29%), Gaps = 27/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      +Y + A G+ ++  +  +++ +     A+ A        R  L   +    
Sbjct: 8   VISGLETGSLYALAALGIVLIYQTATIINFSQGE-MAMFASFLAFTLWRGDLPYIVAFLA 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G  +    ++       I  +I++      +        G    Y+   +  
Sbjct: 67  AIIFAVFLGGFVHRFCIRPAHKASKIGRMIITLGLIMAIDGLAAAIFGIDSHYMRPAVAA 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +I      +++     +   +   L  T    A R    ++ 
Sbjct: 127 DN-----------IVVGDLILRPNALFIIGVTIVIMLVLFYLLNNTFWGMAIRATSQDET 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    + ++ +++    + G   A + +           ++  I   +LGG 
Sbjct: 176 TARLMGIPVQRIHMLSWIIAATLGAVTGVLVAPTTNV--STTMMMEVHLKSIIAAVLGGF 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         I+     L        +              T ++   L +V++++ + 
Sbjct: 234 GSFIGPVVGGFIIGIADNLIGYYVSLTW-------------QTVIVYGLLIIVLIIKPYG 280

Query: 339 LLR 341
           +L 
Sbjct: 281 ILG 283


>gi|83720544|ref|YP_440607.1| branched-chain amino acid ABC transporter permease [Burkholderia
           thailandensis E264]
 gi|167579297|ref|ZP_02372171.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Burkholderia thailandensis TXDOH]
 gi|167617402|ref|ZP_02386033.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Burkholderia thailandensis Bt4]
 gi|83654369|gb|ABC38432.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Burkholderia thailandensis E264]
          Length = 349

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 60/327 (18%), Positives = 116/327 (35%), Gaps = 23/327 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+A +  L     +    +  Y        L   + A G++++   LGL+ L+     
Sbjct: 25  LPLVATLGTLAAIALVVPAVADAYWIKTLTSALTVSIAAAGVALLYRQLGLVCLSQHALL 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G +   +  +  G    L +   A    A GMI GLP+L+ RG YLA+ TL+M+  FQ
Sbjct: 85  GVGGWI-ALRLAHLGAPFELCVIAGAAGGSAVGMIAGLPALRLRGLYLALVTLMMAGGFQ 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++        G                +    R           +   +  +     L+
Sbjct: 144 VVVSAIGFPDGGGG----------FTGHLSFGARQMMARPLAGQSDAAYFRYVAAWAALA 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++I   RR+    +W  IR  +    +    ++F +  AF ++    G++G   A S  
Sbjct: 194 FALIELHRRSKAGRSWALIRRGEMPALAAGVNVVFYQTWAFGLAGLLAGLSGGLLAGSVG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           ++    F  SE++++ ++ ++GG+           +L  V  L                 
Sbjct: 254 QLDGRAFAASESVLLFALSVVGGVYHWFGALITGLLLRAVPALLTDFG------------ 301

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                       AL   ++     +  
Sbjct: 302 VNGYLAMIFFGAALLHALITAPAGIAG 328


>gi|317047841|ref|YP_004115489.1| inner-membrane translocator [Pantoea sp. At-9b]
 gi|316949458|gb|ADU68933.1| inner-membrane translocator [Pantoea sp. At-9b]
          Length = 355

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 84/312 (26%), Gaps = 10/312 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      L +    +   +  M   + I  + A G+++V+   G + L+      
Sbjct: 17  FIALLIVIGFFSLMVPNFLTTSNLLIMTQHVAITGLLAIGMTLVI-LTGGIDLSVGAVAG 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I       L +         +    +      + +    L      +     +   I   
Sbjct: 76  ICGMVAGALLTNGLPLWGGNVMFFNVPEVILLVALFGVLLGLINGAVVTRLGVAPFICTL 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            ++         + +   D   +        +    F        + +Y  +  M     
Sbjct: 136 GMMYVAR----GSALLFNDGSTYANLVGMPELGNTGFALLGSGTVLGIYIPIWLMVGFLL 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +   R+T +         N+ A       II  K+  +A S     + G   A+    
Sbjct: 192 LGLYLTRKTPLGRYIYATGGNESAARLAGVPIIKVKVFVYAFSGLCAALVGLVVASQLQT 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + V     + GG   +S       +++ + +    M    F  ++
Sbjct: 252 AHPMTGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFLADGMVMMGVSDFWQMV 311

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 312 IKGLVIVTAVVI 323


>gi|255532693|ref|YP_003093065.1| inner-membrane translocator [Pedobacter heparinus DSM 2366]
 gi|255345677|gb|ACU05003.1| inner-membrane translocator [Pedobacter heparinus DSM 2366]
          Length = 324

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 85/312 (27%), Gaps = 16/312 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  LL+ +      +     ++  QI + +  + G+++VV + G + L+     A
Sbjct: 16  LIALFILCLLISMVSDKFLTLSNGWNVMRQISVNICISVGMTLVVLTAG-IDLSVGSVLA 74

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L           + V   I GA             G     A    +     
Sbjct: 75  LCGALTAGLLKNGIAIPEANLFVGFTILGA----------MLAGILTGTALGTFNGWAIT 124

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  I                            F      + + +   +     +  
Sbjct: 125 KFKVPAFIATLAMLTIARGLTLLYTKGFPISGLGDDFSYLGTGWFLGIPVPVWISAIVVL 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           + ++   +T +      I  N+ A       I   K+  +A++ A   + G    +  D 
Sbjct: 185 AAVVLTTKTRLGRYIYAIGGNENASRLSGINISKVKIIVYAIAGALAAVGGLIVTSRLDS 244

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P+     E   + ++VI      GG  S+        I+  +      +N   F   +
Sbjct: 245 AQPNAGNSYELDSIAAVVIGGTSLSGGKGSIMGTVLGAVIIGVLNNGLVLLNVSPFWQQV 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKGAVILLAVIV 316


>gi|84683421|ref|ZP_01011324.1| inner-membrane translocator [Maritimibacter alkaliphilus HTCC2654]
 gi|84668164|gb|EAQ14631.1| inner-membrane translocator [Rhodobacterales bacterium HTCC2654]
          Length = 326

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/336 (14%), Positives = 112/336 (33%), Gaps = 18/336 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+++  +  L  ++  +   L    +       +     L+  + A GLS+V G + +L+
Sbjct: 2   LDRFGGVFWLPVILAIIAFVLIGAPSSWLTLTVAGLSMGLMIFLMASGLSLVFGLMDVLN 61

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                  + GA+    + + +G  +     +   ++    +   +      G +     +
Sbjct: 62  FGHSAFVSFGAFVAASVLAYFGGWLGSDSILLNSLALVFAIAAAVVFGAALGWFFERVIV 121

Query: 128 --IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
             + S+  + ILI    +   +  I        +       +       +  +    ++ 
Sbjct: 122 KPVYSDHLRQILITMGALIVAEQLILATWGGSPVNVPRPHFLEGAIIVGNSSLEVYRLFA 181

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
             LG        +L   RT +    R   +N++   +L   I    +  F + SA   M 
Sbjct: 182 FCLGALVYGGLFVLL-NRTRMGLLIRAGVENREMVEALGFKIDRLFIGVFMLGSALAAMG 240

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA +A   + I          +IV  +VI+GG+ S+        ++  +      +    
Sbjct: 241 GAMWAGY-ETIITPALGAEMMVIVFIVVIIGGLGSIQGTLLGAIVVALMQNYVGFLAPKL 299

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             +                 I + +++L R + L  
Sbjct: 300 ALASNM--------------ILMMVILLWRPYGLAP 321


>gi|125974933|ref|YP_001038843.1| inner-membrane translocator [Clostridium thermocellum ATCC 27405]
 gi|256003810|ref|ZP_05428797.1| inner-membrane translocator [Clostridium thermocellum DSM 2360]
 gi|281418602|ref|ZP_06249621.1| inner-membrane translocator [Clostridium thermocellum JW20]
 gi|125715158|gb|ABN53650.1| cellooligosaccharide ABC transporter membrane protein [Clostridium
           thermocellum ATCC 27405]
 gi|255992148|gb|EEU02243.1| inner-membrane translocator [Clostridium thermocellum DSM 2360]
 gi|281407686|gb|EFB37945.1| inner-membrane translocator [Clostridium thermocellum JW20]
 gi|316939143|gb|ADU73177.1| inner-membrane translocator [Clostridium thermocellum DSM 1313]
          Length = 327

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/327 (11%), Positives = 100/327 (30%), Gaps = 25/327 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+     L     ++ ++ ++  +++ L  G   +   I ++       ++  +G +IV+
Sbjct: 1   MNKVKKFLKSTAGMVLIVTILIGVIVHLATGNFFTSYNISTLTRAAAFVILVGFGQTIVL 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
              G + L+     +I      I   R GL+ +L I ++ ++    G I G     F+  
Sbjct: 61  -LTGGIDLSVASIASICGMFSAIFMVRLGLNPYLSIILACLLGLVFGAINGFFISYFKLT 119

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
              +    M      + +                          + +       +  +  
Sbjct: 120 PFIVTLATMEIYKGIVYV-------------------ITKGMPITGMPKSAQQFANGVIG 160

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             +  V++ M  +   + + L +T        +  N+     +   I   +L  +++S  
Sbjct: 161 GILPNVVIIMVVICILLTILLNKTKTGRYIYALGGNRNCARIVGIPIERIELLVYSLSGL 220

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVV 295
               AG   A         + +  +   + + V     + GG+ S+        +   + 
Sbjct: 221 LAATAGVLMACKLASFQASIGESWQMDSITAAVLGGTSMAGGIGSVVGTIIGGLLSGVIT 280

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                +    +   +       +    
Sbjct: 281 TCITLLRISSYWETIVTGAVVLIAVLV 307


>gi|319793321|ref|YP_004154961.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315595784|gb|ADU36850.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 343

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 105/324 (32%), Gaps = 30/324 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFL---GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           RL     +L L  V + L +++         +     ++  Q+ I ++ A G++ V+ + 
Sbjct: 32  RLGMLPALLILYVVFWGLTVYVSGDGGSNFATTANTMNILRQVSINLVLAAGMTFVILTA 91

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+     A+ A   ++        + L + ++A ++                    
Sbjct: 92  G-IDLSVGSMLAVSAVLGMLTSLTSHAGLSLPVFLAAGLAMG------------------ 132

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
              LI       + I    +T G           F   T         F        + +
Sbjct: 133 ---LINGTTVALLKINPFIVTLGTMTALRGAAYLFADGTTVLNSEIPSFGWIGNEDFLGL 189

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
            +++     ++    + LR+T +      +  N +A       +    L  +A+S  F G
Sbjct: 190 PWLVWIAAGVTLLSWVILRKTILGLHIYAVGGNPEAARLTGIGVGGVLLFVYAISGLFSG 249

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELC 298
           +AGA  A+     + +     E   + ++V     ++GG+ S+        I+  +    
Sbjct: 250 LAGAMSASRLFGANGNWGTGYELDAIAAVVLGGTSLMGGVGSIVGTVIGALIIGVINNGL 309

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTT 322
             M    F   +       +    
Sbjct: 310 TIMGVSSFWQYVAKGAVILLAVII 333


>gi|146342437|ref|YP_001207485.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. ORS278]
 gi|146195243|emb|CAL79268.1| Putative branched-chain amino acid ABC transporter (permease
           protein) [Bradyrhizobium sp. ORS278]
          Length = 291

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/307 (10%), Positives = 80/307 (26%), Gaps = 26/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A G +++  +   ++        + A+  + +          ++  
Sbjct: 8   IVAGLATGAIYALVAVGFTLLWQTSQTINFAQGEFVMLPAFLMLAVMHLGAPFWLAVLVG 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +   G+   L  +     +  +   I +      + +                   
Sbjct: 68  VLLSALLLGLAFKLLLVDPMLRHGVLPLAIATMALAIGIKEAVKQFFSAEASP------- 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S++             +    VL         + + L RT++ +  +    N  
Sbjct: 121 ----FPSIVPVGDVSILGRTISLQSLGVLAVAILAVVGLTMLLNRTSLGHQMQAAAQNPT 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L  F +++  + +A          ++                I+GG 
Sbjct: 177 VARIIGVPVERMILLTFLINAVLVALASLLITP--IYLAKFSSGEVLGQAAFIAAIVGGF 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        ++  V  L                         + ++ L LVIL R   
Sbjct: 235 NQVRGAIAGGLLIGVVDNLAAAYVS-------------TQYRAAVPMVLLILVILFRPQG 281

Query: 339 LLRLRTP 345
           LL     
Sbjct: 282 LLGRAEE 288


>gi|111018005|ref|YP_700977.1| ABC branched chain amino acid transporter, permease component
           [Rhodococcus jostii RHA1]
 gi|110817535|gb|ABG92819.1| ABC branched chain amino acid transporter, permease component
           [Rhodococcus jostii RHA1]
          Length = 279

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 88/301 (29%), Gaps = 27/301 (8%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           +  +   GLS++ G+ GL +        +GA +  ++   +G+ +     ++  +    G
Sbjct: 1   MIAIAGVGLSLIYGTTGLTNFAHGELVTLGAVAAWVINVTFGVQLIPATILAVFVGILIG 60

Query: 108 MIMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
           ++      K   R     IA L++S      L     I          D    +      
Sbjct: 61  LLNNAGIWKPLRRRKTGLIAQLVVSIGLAISLRYLILIFFSDRAEPFVDYQAQVERHW-- 118

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
                      +         +     +   + L L++T I  A R + DN+    S   
Sbjct: 119 ---------GPIAITDANLVSIGISLVVLVGVALLLQKTRIGKAMRAVSDNRDLAASSGI 169

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAAS-RDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
            +       + +      + G  F  S           F   +++ + + LGG+ +    
Sbjct: 170 DVERVIRFVWGLGGGLAALGGVLFGISELGGRVQWEMGFKLLLLMFAGITLGGLGTAYGA 229

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
                I+  +V+L   +       +        +                R   +L  R 
Sbjct: 230 LLGCVIVGLLVQLSTLVINPDLKYIGGLLILIVILVV-------------RPQGILGSRQ 276

Query: 345 P 345
            
Sbjct: 277 R 277


>gi|29832246|ref|NP_826880.1| sugar ABC transporter permease protein [Streptomyces avermitilis
           MA-4680]
 gi|29609364|dbj|BAC73415.1| putative simple sugar ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
          Length = 331

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 84/303 (27%), Gaps = 23/303 (7%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
              L      +      +  Q+++    A G ++++ + G + L+C    A G+     +
Sbjct: 38  FFSLSTDQFLTGGNFSLIVQQVMVVGTLAIGQTLIILTAG-IDLSCGAVMAFGSIVIAKM 96

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            +   +   + I +  ++ G  G++ GL   K       +   +++  F    I      
Sbjct: 97  AAEGSVPPLVAIALGLVVCGGFGLLNGLLVQKIPLPPFIVTLGMLNVAFALTHIY----- 151

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                           T             +F +    + Y  L    L   +   L  T
Sbjct: 152 ------------SEEQTVTNLPGPLTALGQTFPLGHTDITYGSLVTIALFLLLAYALSST 199

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                   + ++ +A            +  + V+    G+A     +      P   +  
Sbjct: 200 GWGRHVYALGNSAEAARLNGIRTSRLTIGIYTVAGLLYGIAALLLISRTGVGDPQAGQTD 259

Query: 265 ENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
               + ++V+      GG  S+        I+         M        L       + 
Sbjct: 260 NLDSITAVVLGGTSLFGGRGSVLGTFIGVLIVGVFRNGLQLMGVASIYQTLITGVLVILA 319

Query: 320 HTT 322
            T 
Sbjct: 320 VTV 322


>gi|311278525|ref|YP_003940756.1| inner-membrane translocator [Enterobacter cloacae SCF1]
 gi|308747720|gb|ADO47472.1| inner-membrane translocator [Enterobacter cloacae SCF1]
          Length = 329

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 96/303 (31%), Gaps = 20/303 (6%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +++  L LL V   + L +      S   +  +     I  + A GL  VV   G + ++
Sbjct: 12  QHEFWLGLLVVALAVGLSVGTDEFLSLGNLTDVATSYAILGILACGL-FVVLISGGIDIS 70

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                AI  Y        +G +  L + ++  +    G++ G      R          +
Sbjct: 71  FPAMTAIAQYVMASWVIAHGGNFALALAIAIAVGLLLGLLNGFLVYWLRVP-------AI 123

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 + + +  +     G ++     +    +      +   ++   Y+  +   LL 
Sbjct: 124 IITIATLNVYYGLLVYATKGTWLYGFPDWFMAGIN-----WFSFTAADGYDYGLTLPLLC 178

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +        + + RT +      +  N+ A   L   ++      +       G+A    
Sbjct: 179 LAGTILFTAVLMNRTRLGRQIYAMGGNRDAASRLGLNLLKLHFYVYGYMGILAGIAAVVQ 238

Query: 250 AASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNF 303
           A     ++P+       + V++ V+L      GG  +L        +L  +      +  
Sbjct: 239 AQITQSVAPNSL-LGFELTVLAAVVLGGTSMSGGRGTLIGTLLGVVLLAFLQNGLTLLGV 297

Query: 304 YYF 306
             +
Sbjct: 298 SSY 300


>gi|315505046|ref|YP_004083933.1| inner-membrane translocator [Micromonospora sp. L5]
 gi|315411665|gb|ADU09782.1| inner-membrane translocator [Micromonospora sp. L5]
          Length = 364

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 108/339 (31%), Gaps = 25/339 (7%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGA-------TKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           ++   +  L A++   ++ +             +   + ++   +    + A G++ VV 
Sbjct: 44  DRLFAVQSLFALLVIFVVAILASPRRDGEILFLTAGNLGNIVRAVSEIGIIAIGMTFVV- 102

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
            LG + L+      + A     L    GL I   +     I    G + G    +     
Sbjct: 103 LLGGIDLSVGAILGLSAVGTATLMVDSGLGILPAVAAVLAIGVLFGALQGYAVARLGIQS 162

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
             +    +      +      I +G  GI +A                  F         
Sbjct: 163 FIVTLAGLQ-----VARGIARIWSGGLGIPIA-------YGDGPQEAPPAFELLNGSING 210

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +    +    +  + ++ LR TA +     I  N+KA       +   K++ FAV+   
Sbjct: 211 VLPVPAVLFVLIGVAAVVVLRTTAFARHVCAIGGNEKAARLSGVPVTRVKVAVFAVTGLL 270

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
             +AG   A   ++ SP+       +  I+ V++GG TSL+     +  + G +     +
Sbjct: 271 AAVAGVVHAGQLNQGSPND-GAGYELDAIAAVVIGG-TSLAG---GSGSMGGTLAGALLL 325

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                   L    +        +VI L   +      + 
Sbjct: 326 GILNNILALNNIDANVQLLIKGLVIVLAAALQKLRRGIA 364


>gi|283832081|ref|ZP_06351822.1| ribose ABC transporter, permease protein [Citrobacter youngae ATCC
           29220]
 gi|291071706|gb|EFE09815.1| ribose ABC transporter, permease protein [Citrobacter youngae ATCC
           29220]
          Length = 329

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 100/303 (33%), Gaps = 20/303 (6%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +++  L LL V   + L +      S   +  +     I  + A GL  VV   G + ++
Sbjct: 12  QHEFWLGLLVVALAVGLSVSTDEFLSLGNLTDVATSYAILGILACGL-FVVLISGGIDIS 70

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                AI  Y+       +G +  L + ++  +    G+I G    + R          +
Sbjct: 71  FPAMTAIAQYAMASWVIAHGGNFALALAIAMAVGLLLGLINGFLVYRLRVP-------AI 123

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 + + +  +     G ++     +    +      +   ++   Y+  +   LL 
Sbjct: 124 IITIATLNVYYGLLVYATKGTWLYGFPDWFMNGIN-----WLSFTAADGYDYGLTLPLLC 178

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  +     + +  T +      +  N+ A   L   ++      +       G+A    
Sbjct: 179 LAAVIIFTAVLMNYTRLGRQVYAMGGNRDAASRLGLNLLKLHFYVYGYMGILAGVAAVVQ 238

Query: 250 AASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNF 303
           A     ++P+       + V++ V+L      GG  +L+       +L  +      ++ 
Sbjct: 239 AQITQSVAPNSL-LGFELTVLAAVVLGGTSMSGGRGTLTGTLLGVVLLAFLQNGLTLLSV 297

Query: 304 YYF 306
             +
Sbjct: 298 SSY 300


>gi|281177725|dbj|BAI54055.1| ribose ABC transporter permease component [Escherichia coli SE15]
          Length = 355

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 83/312 (26%), Gaps = 10/312 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      + +    +   +  M   + I  + A G+++V+   G + L+      
Sbjct: 17  FIALLLVIAFFSVMVPNFLTASNLLIMTQHVAITGLLAIGMTLVI-LTGGIDLSVGAVAG 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I       L +         I    +      + +    +      +     +   I   
Sbjct: 76  ICGMVAGALLTNGLPLWSGNIIFFNVPEVILCVAVFGILVGLVNGAVITRFGVAPFICTL 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            ++         + +   D   +        +    F +      + +Y  +  M     
Sbjct: 136 GMMYVAR----GSALLFNDGSTYPNLNGMETLGNTGFATLGSGTFLGIYLPIWLMIGFLI 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +T +      I  N+ A       I+  K+  +A S       G   A+    
Sbjct: 192 LGYWITTKTPLGRYIYAIGGNESAARLAGVPIVKVKVFVYAFSGLCAAFVGLIVASQLQT 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + V     + GG   +S       +++ + +    M    F  ++
Sbjct: 252 AHPMTGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFLADGMVMMGVSDFWQMV 311

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 312 IKGLVIVTAVVV 323


>gi|170022321|ref|YP_001718826.1| monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|169748855|gb|ACA66373.1| Monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
          Length = 394

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/355 (13%), Positives = 97/355 (27%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  +A++     F   GA  S + I ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 33  MLAAIAIIMLFFTFTTEGAYLSARNISNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 91

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM---- 129
             +      I     G  + L I V+  +    G   G      +     +    M    
Sbjct: 92  MGLLGGIAAIFDVWLGWPLPLTIVVTLALGLVLGAWNGWWVAYRKVPSFIVTLAGMLAFR 151

Query: 130 -------------------------------------SEIFQNILIKWKPITNGKAGIYV 152
                                                  +   +  +W+   +       
Sbjct: 152 GILIGITNGTTVSPTSNAMSQIGQSYLPSGIGFGIGAIGLMLFVAWQWRRRNHRIRLGLP 211

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                   T               +     +   +L +  L  + +    RTA       
Sbjct: 212 VAAPQGDVTRQTITAVIVLGAIYLLNDYRGVPTPVLILTALMLAGVFMATRTAFGRRTYA 271

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N  A       +   KL+ FA++   + MAG   ++     SP     +E   + + 
Sbjct: 272 IGGNIDAARLSGINVERTKLAVFAINGLMVAMAGLILSSRLGAGSPSAGNIAELDAIAAC 331

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 332 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGAILLLAVWM 386


>gi|32472550|ref|NP_865544.1| ribose transport system permease protein rbsC [Rhodopirellula
           baltica SH 1]
 gi|32443786|emb|CAD73228.1| ribose transport system permease protein rbsC [Rhodopirellula
           baltica SH 1]
          Length = 323

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/317 (11%), Positives = 88/317 (27%), Gaps = 26/317 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   V  + +     +  + +   ++  QI + +  + G+++++   G + L+     A
Sbjct: 15  LIALAVMLIAMSFLSDSFFTPENGLNILRQISVNLSLSIGMTLII-LTGGIDLSVGAILA 73

Query: 76  IGAYSYVILGSRYGLSIWLLI-----PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           +       L     +   L +        A++SG                   +   + +
Sbjct: 74  LSGAVAAGLLKNGIMLEPLGVKLEFTVFGAIVSGLLVGSAAGLFNGVAVTRFKLPPFVAT 133

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
               +I      +  G                         F S      + +   +   
Sbjct: 134 LGMFSIARGLTMLWTGG---------------FPVTGLGSSFGSIGTGVFLQIPVPVWIT 178

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L    +L  R T        +  N++A       +   K++ + +     G+AG    
Sbjct: 179 GALVGVFVLLTRTTRFGRHVYAVGGNERASLLTGLPVDRIKIAVYTLGGLLAGVAGLIVT 238

Query: 251 ASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A  D   P+     E   + ++VI      GG  S+        I+  +      +N   
Sbjct: 239 ARLDSAQPNAGLGYELDSIAAVVIGGTSLSGGRGSVMGTVLGCLIIGVLNNSLFLLNVSP 298

Query: 306 FNSLLKFDCSFNMRHTT 322
           F   +            
Sbjct: 299 FWQQVVKGFVILAAVAV 315


>gi|292656918|ref|YP_003536815.1| putative branched-chain amino acids ABC transporter permease
           [Haloferax volcanii DS2]
 gi|291372171|gb|ADE04398.1| ABC-type transport system permease protein (probable substrate
           branched-chain amino acids) [Haloferax volcanii DS2]
          Length = 368

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 98/324 (30%), Gaps = 37/324 (11%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS---------------- 86
            ++ L+  +   GLS+    L   + +       GA+S                      
Sbjct: 56  LMRGLVIGLAGIGLSMTYSILNFANFSHGDYITAGAFSGWATTYLIAGLGRADIGALLLV 115

Query: 87  -------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                     L I +L    A+++G         +L    D      +   +    ++  
Sbjct: 116 GAGGSVYGGTLGIGMLSTPLAVVAGIVVSGGFAIALSLAVDRTIFKPIRNEDGITLLITS 175

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                  +  +         GTT +       F    V        +L+    L   + +
Sbjct: 176 VGVAFALRYLMQFVFGSDVRGTTAQPPSLSLDFIDGTVFINAHDITLLVVASALMLGVHV 235

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L+RT +  A R + DN+        +      + + +     G+AG  F   +  +  +
Sbjct: 236 LLQRTKLGKAMRAMADNKDLALITGISTERVVRATWIIGGGLTGVAGYMFILWKGTLGFN 295

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
              +   +++ + VILGG+ S+        ++     +        F+    F       
Sbjct: 296 D-GWLLLLLIFAAVILGGIGSIYGAIAGGLVIGLTASMSVLWIPSAFSRAAAF------- 347

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
                 + + +++L++   L   R
Sbjct: 348 ------VVMIVILLVKPSGLFSGR 365


>gi|241666629|ref|YP_002984713.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240862086|gb|ACS59751.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 333

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/317 (13%), Positives = 97/317 (30%), Gaps = 23/317 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K + +L L+ VV   +         + + +  +     I ++ A    + V     + 
Sbjct: 5   IRKRETLLFLIIVVMIAIFSTRAADFATPENLAGIFNDTSILIILALAQ-MTVILTKSID 63

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A    +  ++ + Y     +++ ++A++ GAC   +    +        + TL
Sbjct: 64  LSVAANLAFTGMAIAMMNAAYPDLPLVVLILAAIVIGACLGAINGFLVWALEIPPIVVTL 123

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I++ +                       G  V +      F S      + +  + 
Sbjct: 124 GTLTIYRGMAFVLSG-----------------GAWVNAHQMTPVFLSVPRTPILGLPVLG 166

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                +   + + LR T    +      N  A         + K  AF +S A  G+A  
Sbjct: 167 WVGIVIVLLMYVLLRYTQFGRSAYATGGNPTAAVYAGIDTGWTKFLAFVLSGALAGLASY 226

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
            + +       D+    E   V + V     I GG+ S++        L  +      + 
Sbjct: 227 LWVSRYAVAYVDIANGFELDSVAACVIGGISIAGGVGSVAGTVLGALFLGVIKNALPVIG 286

Query: 303 FYYFNSLLKFDCSFNMR 319
              F  +        + 
Sbjct: 287 ISPFTQMAISGTVIILA 303


>gi|239932082|ref|ZP_04689035.1| putative ABC transporter permease protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291440448|ref|ZP_06579838.1| inner-membrane translocator [Streptomyces ghanaensis ATCC 14672]
 gi|291343343|gb|EFE70299.1| inner-membrane translocator [Streptomyces ghanaensis ATCC 14672]
          Length = 333

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/317 (15%), Positives = 106/317 (33%), Gaps = 21/317 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+  +  +    V+  +L  +   +      + S+G Q+    + A G++ V+   G + 
Sbjct: 19  LHAREAGVFAALVLLFVLGVVLSPSFAQSDNLLSVGQQVSQIGIMAIGVTFVI-LNGEID 77

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+    YA+ A S  IL S     + L   V   +    G++ GL  +            
Sbjct: 78  LSVGSTYALSAISTGILISDGWNWV-LASCVGLAVGAVAGLLNGLAVVVLGVPSFI---- 132

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                   + +    +  G A +        L ++   +  F       +   + M +V 
Sbjct: 133 --------VTLGTLSVFRGIALLISDGAPISLSSSQAGVADFNLLGQGLLFGVVPMQFVF 184

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  +   ++L   R+        +  NQ+A   +   +   KL+AF +S    G+AG 
Sbjct: 185 FAVIAVIGGVLLA--RSRFGFHTYAVGGNQEAARLVGVNVKRVKLTAFVLSGFTAGLAGV 242

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
              +    +     +  E  ++ +++I      GG  ++       A +  +  +     
Sbjct: 243 LGLSFLSYVQGVTGQGMELTVISAVIIGGAALFGGSGTIWGTVIGVAFIGLLQNILNVKG 302

Query: 303 FYYFNSLLKFDCSFNMR 319
              F   +         
Sbjct: 303 ISSFWQTVVTGLVIVAA 319


>gi|66046492|ref|YP_236333.1| inner-membrane translocator [Pseudomonas syringae pv. syringae
           B728a]
 gi|289678651|ref|ZP_06499541.1| inner-membrane translocator [Pseudomonas syringae pv. syringae FF5]
 gi|302186641|ref|ZP_07263314.1| inner-membrane translocator [Pseudomonas syringae pv. syringae 642]
 gi|63257199|gb|AAY38295.1| inner-membrane translocator [Pseudomonas syringae pv. syringae
           B728a]
 gi|330953955|gb|EGH54215.1| inner-membrane translocator [Pseudomonas syringae Cit 7]
          Length = 341

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/319 (14%), Positives = 96/319 (30%), Gaps = 26/319 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + L+ +   L+  LF    + Q ++ +      M +Q+ I  + A G++ V+ + G + L
Sbjct: 27  IFLVLIGIGLIFELFGWIVRDQSFLLNSQRLVLMILQVSIIGLLAIGVTQVIITTG-IDL 85

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+ A     L              S         +  LP        L +  L 
Sbjct: 86  SSGSVLALSAMIAASLAQ-----------TSDFSRAVFPSLTDLPVWIPVVVGLGVGLLA 134

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
            +     I I   P      G+ V+ R      T    +       + +        + L
Sbjct: 135 GAINGSIIAITGIPPFIATLGMMVSARGLARFYTEGQPVSMLSDSYTAIGQGAMPVIIFL 194

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +        + LR T        I  N +A  +    +    +  ++++    G+AG  
Sbjct: 195 VVA---VIFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLVIVYSIAGLLAGLAGVV 251

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            +A        M    E   + + VI      GG+  ++       IL  +      +  
Sbjct: 252 ASARAATGQAGMGMSYELDAIAAAVIGGTSLSGGVGRITGTVIGALILGVMASGFTFVGV 311

Query: 304 YYFNSLLKFDCSFNMRHTT 322
             +   +       +    
Sbjct: 312 DAYVQDIIKGLIIVVAVVI 330


>gi|327401811|ref|YP_004342650.1| ABC transporter integral membrane subunit [Archaeoglobus veneficus
           SNP6]
 gi|327317319|gb|AEA47935.1| ABC-type transporter, integral membrane subunit [Archaeoglobus
           veneficus SNP6]
          Length = 289

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/298 (11%), Positives = 92/298 (30%), Gaps = 22/298 (7%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           I   I+ + A G S+V G   +L+      +A+GAY  ++  +     +   + +   I 
Sbjct: 12  IIGGIWALVASGFSLVFGVARILNFAHGTYFALGAYVAIVANAALQNVMPEWLSLIFSIL 71

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
            +  ++       +          I       +++    +        +   ++   +  
Sbjct: 72  FSIFVVGLAGVAIYH-------VCIRPVRDYEVMVILVTLAIALLFEEILLAIFRDVSVS 124

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
              +       + +         L+    +   +  ++  T           + +A   +
Sbjct: 125 VPSLVSGVVNVAGIPIPYTRILALVVAVVVILLLDRFISTTRTGKEILATSQDVEAAMLV 184

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              +         +S+    +AG  +A  +             I   +IVILGG+ S+  
Sbjct: 185 GIDVERVYRIVMFISAMLAALAGVLYA--QIYAVNPQTALRVLIYAFAIVILGGLGSVRG 242

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              A  I+  +           ++ ++               +A+  ++++R   L+ 
Sbjct: 243 SIIAAFIIGFMQVAVSIALEARWSEIVAM-------------VAIIAILIVRPKGLMG 287


>gi|320450224|ref|YP_004202320.1| inner-membrane translocator [Thermus scotoductus SA-01]
 gi|320150393|gb|ADW21771.1| inner-membrane translocator [Thermus scotoductus SA-01]
          Length = 287

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 85/287 (29%), Gaps = 28/287 (9%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           + G   +++L     Y +GAY  +++ +        L+ V         ++  L      
Sbjct: 29  IFGVARVINLAHGAFYMLGAYLGLLISTALNNFWLSLLLVPLCTGFLGVLVERLLLKGLH 88

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           G  L    L +   F  ++        G +   VA      G                ++
Sbjct: 89  GKELEQVLLTIGLGF--VIADLLRAFFGASIRSVAPPPELSGPVF----------LGPLL 136

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
           Y  +  +VL         +   L +T +    R +  +     +L        L  F V 
Sbjct: 137 YPKYPLFVLALGIVAFTVVRTLLVKTPLGIKVRAVTADPSMASALGIPPAQISLVTFGVG 196

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           +A  G+ G   A           + +   + + +V++GG+  +        ++  V    
Sbjct: 197 TALAGLGGVVGAPLIALAPGLDAQMTL--LALIVVVIGGLGRIEGAFWGALLVGIVDGFG 254

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                                   L+   + LV+  R   LL  RT 
Sbjct: 255 KLF--------------LPQAAMFLIFALMALVLAFRPEGLLGRRTA 287


>gi|116249707|ref|YP_765545.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115254355|emb|CAK03983.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 286

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 100/304 (32%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       ++  + A GL+I +G +  ++L        G Y  V+L + YG+S +  +P+
Sbjct: 5   LFDGIAYGMLLFILACGLTITLGLMNFINLAHGAFAMAGGYITVVLMNSYGVSFYWCLPI 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+++     +       +  ++ S     + I       G     +      
Sbjct: 65  AFLAVALAGLVLERLLYRHLYSKPHLDQVLFSVGLVFMSIAGAYYFMGGQQQMIQLPQEL 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G          R+    V    +  ++++    L+ ++   L +T   +  R   D+ +
Sbjct: 125 SG----------RWDFYGVGIGRYRLFIIVVCILLTITLQFLLTKTRFGSQLRAAVDDGR 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       FAV S   G+ GA             F     I  + +V +GG 
Sbjct: 175 VARGLGINVSAVFALTFAVGSGLAGLGGAMGTEILGL--DPNFPLKFMIYFLIVVTVGGT 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S++    A  +L                               ++   +  V+L+R H 
Sbjct: 233 SSITGPFLAALLLGVADVAGKYY--------------VPQIGAFVIYGVMVAVLLLRPHG 278

Query: 339 LLRL 342
           L   
Sbjct: 279 LFSR 282


>gi|302337784|ref|YP_003802990.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
 gi|301634969|gb|ADK80396.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
          Length = 328

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 104/313 (33%), Gaps = 22/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ V+  L+  +      S + I ++  QI I  + + G++ V+  LG + L+     
Sbjct: 19  IGIILVLLFLIFAVTTPHFASFQNISNIFTQISINTIISVGMTFVI-LLGGIDLSVGSLL 77

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ + +  ++ S   LS    I  +  +S   GM  GL +      +   + ++   +  
Sbjct: 78  ALCSVAAGMVMSNGELSPGFSIFSAVFLSIVIGMFFGLANGAISEKWKIHSFIVTLGMLN 137

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                   ++N                          F S   I  + +  + +    L 
Sbjct: 138 ITRGMALQVSNS----------------RTFFDFPAGFNSFGNINIVGLPIIFVIALLLV 181

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L RT        I +N+++           K+ AF +  A +G+A   +    +
Sbjct: 182 ILGQVVLTRTVFGRMLIAIGNNEESVRLSGHNTALYKVLAFVICGASVGIAAIMYMLRLN 241

Query: 255 RISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             SP +    E   + ++VI      GG  SL        I+  +      +    F   
Sbjct: 242 IASPILGVGFELNAIAAVVIGGTSMNGGKGSLLGTFLGACIMGVLNNGLLLIGLGDFARQ 301

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 302 IVTGLIIILAVIL 314


>gi|291617428|ref|YP_003520170.1| RbsC [Pantoea ananatis LMG 20103]
 gi|291152458|gb|ADD77042.1| RbsC [Pantoea ananatis LMG 20103]
 gi|327393863|dbj|BAK11285.1| ribose transport system permease protein RbsC [Pantoea ananatis
           AJ13355]
          Length = 323

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 95/322 (29%), Gaps = 27/322 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           L+ N  D    +  ++  +          +   + ++  Q  I  + A G+++V+   G 
Sbjct: 17  LKFNLRDAGTLIGLLIIVVTFSFLSPVFFTVPNLLNILQQSSINALIALGMTLVI-ISGG 75

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+ A     L          ++    + + +      L +           
Sbjct: 76  IDLSVGPTAALSAVLGATLMVSGVPVPLAIMATLCVGAVSGIFSGTLIA----------- 124

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L  +     G +       +Y  G  V  +   FR   +  ++ +    
Sbjct: 125 --------YAGLQPFIVTLGGLSLFRAIALIYTGGNPVFGIPMSFRSLINSTVFGVPTPI 176

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           V++ +  L    ++   +T +      I  N++A       +   K++ + +S     +A
Sbjct: 177 VVVAVIALCLWTVMN--KTPLGEYILAIGGNEEAARVAGVPVKRTKVTVYVISGMLASLA 234

Query: 246 GAFFAASRDRISPDMFKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
                       P +    E        +    ++GG  S+        IL  +      
Sbjct: 235 SLILIGRLGAAEPTIGNLWELDAIAAAAIGGASLMGGKGSIFGTLIGVIILGALRNGLTL 294

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +N   F  LL       +    
Sbjct: 295 LNIQAFYQLLATGLIIIIAMLI 316


>gi|254295066|ref|YP_003061089.1| urea ABC transporter permease UrtB [Hirschia baltica ATCC 49814]
 gi|254043597|gb|ACT60392.1| urea ABC transporter, permease protein UrtB [Hirschia baltica ATCC
           49814]
          Length = 302

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/318 (15%), Positives = 103/318 (32%), Gaps = 21/318 (6%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS-RYG 89
                   I +      I+++ A GL++  G + ++++       +G Y   +      G
Sbjct: 3   SFALISNQIFNGFSVASIFLLAALGLALSFGLMRVINMAHGEMLMLGGYFAFLTMQIIPG 62

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
               L+    A I  A    +   +L  R     + TL+ +     IL +      G  G
Sbjct: 63  GMGLLVALPVAFIGAAATGGLLQTTLISRLAKRPLDTLLATWGVSLILQQASRDIFGAIG 122

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           + V        T +   I+      + V       +++     +   + L  R T I   
Sbjct: 123 VEVQAP-----TWLDGGIQITEGMFAGVSLPATRLFIIAVAILVLIGLTLIFRHTRIGLL 177

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R +  ++    +    +  A L  F + S   G+AG   A             S  +  
Sbjct: 178 IRAVNQDRMMAAATGIEVKRADLIIFCLGSGIAGLAGVVLAILGPV--TPSVGQSYIVPA 235

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             +V++GG+ S++    A  +L     L                         L+++ + 
Sbjct: 236 FLVVVMGGLGSIAGTTIAALMLGLFSALAQIYVD-------------VSMAQVLLLVFVI 282

Query: 330 LVILMRSHSLLRLRTPSN 347
           + I  R   ++  ++ + 
Sbjct: 283 VFIQFRPQGVIAQKSRAL 300


>gi|218290193|ref|ZP_03494352.1| Monosaccharide-transporting ATPase [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218239788|gb|EED06978.1| Monosaccharide-transporting ATPase [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 309

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/320 (12%), Positives = 89/320 (27%), Gaps = 27/320 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             +Y     L  V+  L+L +      +   +  + +Q  +  + A G++ V+ + G + 
Sbjct: 4   FRRYRLGPFLGLVLLILILAVASRQFFTASNLLDIALQTSVNALLAIGMTFVILTAG-ID 62

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+ +                 I    + + A      L +      Y  +A  
Sbjct: 63  LSVGSTLALTSAIAAQWMVGGTSPWLAGISALCIGAIAGAFNGVLVA------YARLAPF 116

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I++     +      I      I+                  + F        + +   +
Sbjct: 117 IVTLGTMTLFRGLTEIYTNGQPIFNLP---------------YSFNGLGNGAVLGVPVPV 161

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                +     + L RT        I  N+K  +          ++ + VS     +AG 
Sbjct: 162 WITMIVFLIAWMVLSRTVAGRRIYAIGGNEKVAYLAGVRAKRYLVAVYVVSGILAALAGL 221

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
              +      P   +  E   + ++V     + GG  +L        IL  +      +N
Sbjct: 222 ILTSRLATAEPTAGEGYELDAITAVVLGGTSLFGGEGTLVGTIIGALILGVIDNGLNLLN 281

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F           +    
Sbjct: 282 VSSFYQDAVKGLVILIAIML 301


>gi|119872105|ref|YP_930112.1| inner-membrane translocator [Pyrobaculum islandicum DSM 4184]
 gi|119673513|gb|ABL87769.1| inner-membrane translocator [Pyrobaculum islandicum DSM 4184]
          Length = 318

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 90/296 (30%), Gaps = 12/296 (4%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           IYV+   GL++   +  + S        +GAY              L   +         
Sbjct: 20  IYVLLGLGLNLTYITTKIPSFAHGDLATVGAYVSYFTIVFLLQPFGLPANIYLTFPLVAL 79

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +   +  L +   +  +           I           +   VAD +      +   I
Sbjct: 80  VTGLVAVLSYIAVFKPMIRRGAGITPLMIASFGLHYVIFASIAIVADYVQNTFGYLTRNI 139

Query: 168 RFFRFPSSFVIYEIFMYYVL---LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
              R+   +   +     ++   + +  ++  +   L +T      R   DN     ++ 
Sbjct: 140 LLTRWEYIWPGTDFLTSALINTTIMVAIITTLLYFLLYKTRYGIVMRASIDNLYLARAVG 199

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
             +     +A+ +  A  G+AG + A        +   +    +V  + ++GG++++   
Sbjct: 200 INVEKVFTAAWLLIGAVTGIAGVYMAMFFPM--TEELGWLRLAVVFIVSVVGGLSNIYGA 257

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                ++   + L         N   +F          +    + +++L     L+
Sbjct: 258 VLGGYVVGLSLVLGATYILTPLNIPTEF-------QLVIPFAFVIVILLFAPQGLV 306


>gi|160900593|ref|YP_001566175.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160366177|gb|ABX37790.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 294

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 103/303 (33%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +    Y + + GL+++ G L +++      + +GA    +  S + ++ W+++ +
Sbjct: 15  LLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMVTWMAMSYFNINYWVMLVL 74

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++ G  G+++    L++      +  L+++     ++        G +G         
Sbjct: 75  SPLLVGLLGVLIERFLLRWIYKLDHLYGLLLTLGLSLLIEGLFRSVYGVSG--------- 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +        F+I   +  +V+L    +  +    + +T I    R   +N +
Sbjct: 126 -LGYDTPELLEGATNLGFMILPNYRAWVVLASIVVCVATWFMIEKTRIGAYLRAGTENPR 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +A  +A    AG   A                +  + +  +GGM
Sbjct: 185 LVEAFGVNVPVMITLTYAFGAALAAFAGVLAAPVYQVTPLMGQNLIIVVFAVVV--IGGM 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L  +  L                  +    +T++   + +V+L+R   
Sbjct: 243 GSIMGSILTGLGLGVIEGLTKVF--------------WPEASSTVVFFIMVIVLLIRPAG 288

Query: 339 LLR 341
           L  
Sbjct: 289 LFG 291


>gi|78066152|ref|YP_368921.1| ABC sugar transporter, inner membrane subunit [Burkholderia sp.
           383]
 gi|77966897|gb|ABB08277.1| ABC sugar transporter, inner membrane subunit [Burkholderia sp.
           383]
          Length = 345

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 96/311 (30%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +V  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 46  VLLVLCIGFGFLTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 104

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A + ++  +  G   WL +P + ++    G I G      R     +    M+       
Sbjct: 105 AVAALLASTIPGW-GWLGVPFALIVGLVFGAINGGLISFLRLPPFIVTLGAMT------A 157

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++      G        +L               F        + + ++++  C + A  
Sbjct: 158 VRGVARLIGNDTTVFNPQLP--------------FAFIGNGTILGVPWLVVIACAVIAIS 203

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   ++  +A S    G+     AA     +
Sbjct: 204 WFILRRTVLGMRIYSVGGNPEAARLSGINVRAIQMFVYAASGLLAGLGAVMSAARLYAAN 263

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 264 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLTNGLVLLGVSDIWQYII 323

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 324 KGLVIIGAVAL 334


>gi|323691488|ref|ZP_08105759.1| inner membrane ABC transporter permease ytfT [Clostridium symbiosum
           WAL-14673]
 gi|323504461|gb|EGB20252.1| inner membrane ABC transporter permease ytfT [Clostridium symbiosum
           WAL-14673]
          Length = 319

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 96/287 (33%), Gaps = 23/287 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L + + LL  LF         ++++  Q+   ++   G+++V+ S G + ++     
Sbjct: 17  AITLLLFFVLLNSLFTPNFFRIGNLNNVITQLCPTILCGMGMTLVI-STGGIDISVGSVM 75

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       L    GL   +L  V+  +   C   + +  L+ +   + +  ++      
Sbjct: 76  ALAGVLTARLMPETGLPAAVLAAVAVSVVVGCFTGIMVGKLRLQAMVITLGLMLGLRGVA 135

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +L   + I   K G        +    +  +I     P    +                
Sbjct: 136 QVLCGGRDIYFNKLGEVGKQLSLWGTYKLGGVIPVQIIPIVLSV---------------- 179

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A++ + + +T +    + + DN ++            +  + +S+ F   AG F AA   
Sbjct: 180 AAVWVMIEKTVLGRQIQAVGDNLRSSSLAGINTARTLMIVYGLSTFFAAFAGIFQAAKVS 239

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVV 295
             +         +  I+ V++GG         +        I+  + 
Sbjct: 240 VAAGSSLGQLAELDAIAAVVIGGTPMSGGKAHVLGTVVGALIMQMIT 286


>gi|312795635|ref|YP_004028557.1| branched-chain amino acid transport system permease protein livH
           [Burkholderia rhizoxinica HKI 454]
 gi|312167410|emb|CBW74413.1| Branched-chain amino acid transport system permease protein livH
           [Burkholderia rhizoxinica HKI 454]
          Length = 321

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 105/314 (33%), Gaps = 24/314 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  +   GL++V   +G+++      Y +GAY         G +  L++  
Sbjct: 14  LLNGLSYGLLLFLLCAGLTLVFSLMGVMNFAHASFYMLGAYIGYTSARYGGFAAALILAP 73

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+   A    +G+     R   L  A L+ +     ++ ++  +  G            
Sbjct: 74  AAVAGLAAAFELGVLRRVHRQGPL--AQLLATFGLAYLIAEFVQLGWG---------RSP 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   V   +         V +     +++     +     L LR + +       R +  
Sbjct: 123 LPAVVPQWLDGALVNWHGVAFSRLRAFMMAISAGVLGLCALLLRYSRLGLVIAAARTHPH 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  +L   +    +  FA  +A    A A        ++      +   +V +IV+ GGM
Sbjct: 183 AVQALGHDVARVHIQVFACGAAL--AAVAGVLGGVAFVTDTSMAETLGSVVFAIVVAGGM 240

Query: 279 TSLSKIAKATAILIGVVELCCGM-----------NFYYFNSLLKFDCSFNMRHTTLMVIA 327
            SL+    A+ +   V  L  G+                 +      +          + 
Sbjct: 241 GSLAGAFAASLLFGIVQTLLVGLDIRLGSLLHWVLPTVDETGAWGRITLAQLAPVTPFVL 300

Query: 328 LFLVILMRSHSLLR 341
           L +++ +R   L+R
Sbjct: 301 LIIMLALRPGGLVR 314


>gi|206559915|ref|YP_002230679.1| putative sugar ABC transporter membrane protein [Burkholderia
           cenocepacia J2315]
 gi|198035956|emb|CAR51848.1| putative sugar ABC transport system, membrane protein [Burkholderia
           cenocepacia J2315]
          Length = 345

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 95/311 (30%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +V  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 46  VLLVLCVGFGFLTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 104

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A + +I  +  G   WL +P +  +    G I G      R     +    M+       
Sbjct: 105 AVAALIASTLPGW-GWLGVPFALAVGLVFGAINGGLISFLRLPPFIVTLGAMT------A 157

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++      G        +L               F        + + ++++  C + A  
Sbjct: 158 VRGVARLIGNDTTVFNPQLP--------------FAFIGNGSILGVPWLVVIACAVIAIS 203

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   ++  +A S    G+     AA     +
Sbjct: 204 WFILRRTVLGMRIYSVGGNPEAARLSGINVRAIQMFVYAASGLLAGLGAVMSAARLYAAN 263

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 264 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLTNGLVLLGVSDIWQYII 323

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 324 KGLVIIGAVAL 334


>gi|116255612|ref|YP_771445.1| putative substrate-binding component of ABC transporter involved in
           competition for nodulation [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115260260|emb|CAK03364.1| rhamnose permease protein of ABC transporter complex [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 333

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/317 (13%), Positives = 97/317 (30%), Gaps = 23/317 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K + +L L+ VV   +         + + +  +     I ++ A    + V     + 
Sbjct: 5   IRKRETLLFLIIVVMIAIFSTRAADFATPENLAGIFNDTSILIILALAQ-MTVILTKSID 63

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A    +  ++ + Y     +++ ++A++ GAC   +    +        + TL
Sbjct: 64  LSVAANLAFTGMAIAMMNAAYPDLPLVVLIIAAIVIGACLGAINGFLVWALEIPPIVVTL 123

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I++ +                       G  V +      F S      + +  + 
Sbjct: 124 GTLTIYRGMAFVLSG-----------------GAWVNAHQMTPVFLSVPRTPILGLPVLG 166

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                +   + + LR T    +      N  A         + K  AF +S A  G+A  
Sbjct: 167 WVGIVIVLLMYVLLRYTQFGRSAYATGGNPTAAVYAGIDTGWTKFLAFVLSGALAGLASY 226

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
            + +       D+    E   V + V     I GG+ S++        L  +      + 
Sbjct: 227 LWVSRYAVAYVDIANGFELDSVAACVIGGISIAGGVGSVAGTVLGALFLGVIKNALPVIG 286

Query: 303 FYYFNSLLKFDCSFNMR 319
              F  +        + 
Sbjct: 287 ISPFTQMAISGTVIILA 303


>gi|121611608|ref|YP_999415.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121556248|gb|ABM60397.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 296

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 79/285 (27%), Gaps = 28/285 (9%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           +    G+++L+    YAIGAY  V L    G +  L++    +          L    + 
Sbjct: 35  IFSLGGIVNLSHGAFYAIGAYLAVELTKHLGFAGALVLSPLLVGLLGVLFERFLLRRFYS 94

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
            D +    L        +  +   +  G A +  +    F G  V              +
Sbjct: 95  ADPILGLLLTF--GLAMVAEQVIRMVWGAAPLPASIPPAFKGQVV----------IGDFL 142

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
           Y  +   +L  +      I L L +TA     R           L   +     +   + 
Sbjct: 143 YSRYRLLMLGVVIAALVGIWLLLNKTAFGRVVRAGVQKPDMVAVLGIRLQPYMTAIVVLG 202

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
                +AG  FA                     +V++GG+ S   +  A  ++  V  + 
Sbjct: 203 VGLAALAGVLFAPISGV--HPAMGAEIMTAAFVVVVIGGLGSFWGVVIAALLVGVVRGVT 260

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                    + +       +                R   LL  R
Sbjct: 261 IHFYPPAGEASMYLLMLLVLM--------------FRPRGLLGER 291


>gi|311741930|ref|ZP_07715741.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Aeromicrobium marinum DSM
           15272]
 gi|311314936|gb|EFQ84842.1| branched chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Aeromicrobium marinum DSM
           15272]
          Length = 299

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 89/303 (29%), Gaps = 20/303 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                IY++ A  L +V  S   ++           Y      +  GL+IW+++    ++
Sbjct: 12  MTSGSIYILIALALVVVFRSSSTINFAQGEFALFTTYV-AWWLTERGLNIWVVLLPVIIL 70

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G +     ++        A LI+       L        G       +        
Sbjct: 71  GFIMGALAERFLIRPVRKRDETAILIIGLGLFTGLNGLDGWIWGSDEKVFPNMF------ 124

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                    F             V++    +   + L   RT +    R +  + ++   
Sbjct: 125 --PSAEGTYFTIMGARLHYDSLLVMITTAAVVLGLTLLFTRTNLGLQMRAVATSPESAAL 182

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENIIVISIVILGGMTSL 281
               +      ++ +S+A   +AG     +      +    F   I   +  +LGG+ S+
Sbjct: 183 CGIKVGRILTLSWGLSAAIGSLAGVMLVPTIPPGQLNLASMFHILIFAAAAALLGGLDSI 242

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   IL   + L  G   +   +             T  +I + LV+ +R   L  
Sbjct: 243 KGAVVGGLILGVGLALINGYVSFIGGT----------LSLTFALIVIVLVLTVRPTGLFG 292

Query: 342 LRT 344
            R 
Sbjct: 293 TRR 295


>gi|260461643|ref|ZP_05809890.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
 gi|259032713|gb|EEW33977.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
          Length = 336

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 50/311 (16%), Positives = 96/311 (30%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+             +Q  +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 37  VLVLLAAGFQFINPRFLTQTNLLIVTQQSSINIVLAAGMTFVI-LTGGIDLSVGSILAAS 95

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S       L +P + ++    G+I GL     +     +             
Sbjct: 96  AMV-AVLVSLVPDWGLLGVPAAILVGLGFGLINGLLVAYIKLPPFIVTL----------- 143

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                       +    RL    TTV +    F F  +  ++ I    V+     + + +
Sbjct: 144 -------GSLTAVRGVARLLGQDTTVFNSDLPFDFIGNGSLFGIPWLVVIALAVVVLSWL 196

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +L  +RT +      +  N +A       +    L  + VS    G+ GA  AA     +
Sbjct: 197 VL--KRTVLGTWIYAVGGNAEAARLTGIKVPLVLLFVYGVSGLLAGLGGAMSAARLYAAN 254

Query: 258 PDMFKFSENIIVISIVILGG------MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VILGG      + S+        I+  +               + 
Sbjct: 255 GLQLGQSYELDAIAAVILGGTSFVGGVGSIWGTLIGGLIIAVLSNGLILAGVSDIWQYII 314

Query: 312 FDCSFNMRHTT 322
                 +    
Sbjct: 315 KGLVIIVAVAL 325


>gi|170732868|ref|YP_001764815.1| monosaccharide-transporting ATPase [Burkholderia cenocepacia MC0-3]
 gi|254245544|ref|ZP_04938865.1| hypothetical protein BCPG_00252 [Burkholderia cenocepacia PC184]
 gi|124870320|gb|EAY62036.1| hypothetical protein BCPG_00252 [Burkholderia cenocepacia PC184]
 gi|169816110|gb|ACA90693.1| Monosaccharide-transporting ATPase [Burkholderia cenocepacia MC0-3]
          Length = 345

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 96/311 (30%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +V  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 46  VLLVLCVGFGFLTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 104

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A + +I  +  G   WL +P + ++    G I G      R     +    M+       
Sbjct: 105 AVAALIASTIPGW-GWLGVPFALIVGLVFGAINGGLISFLRLPPFIVTLGAMT------A 157

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++      G        +L               F        + + ++++  C + A  
Sbjct: 158 VRGVARLIGNDTTVFNPQLP--------------FAFIGNGSILGVPWLVVIACAVIAIS 203

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   ++  +A S    G+     AA     +
Sbjct: 204 WFILRRTVLGMRIYSVGGNPEAARLSGINVRAIQMFVYAASGLLAGLGAVMSAARLYAAN 263

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 264 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLTNGLVLLGVSDIWQYII 323

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 324 KGLVIIGAVAL 334


>gi|254186583|ref|ZP_04893100.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|157934268|gb|EDO89938.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
          Length = 349

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 60/327 (18%), Positives = 117/327 (35%), Gaps = 23/327 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+A +  L     +    +  Y        L   + A G++++   LGL+ L+    +
Sbjct: 25  LALVATLGTLAAIALVVPAVADAYWIKTLTSALTVSIAAAGVALLYRQLGLVCLSQHALF 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G +   +  +  G    L +   A    A GMI GLP+L+ RG YLA+ TL+M+  FQ
Sbjct: 85  GVGGWI-ALRLAHLGAPFELCVLAGAAGGSAIGMIAGLPALRLRGLYLALVTLMMAGGFQ 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++        G                +    R           +   +  +     L+
Sbjct: 144 VVVSAIGFPDGGGG----------FTGHLSFGARQMMARPLVGQSDAAYFRYVAAWAALA 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++I   RR+    +W  IR  +    +    ++F +  AF ++    G++G   A S  
Sbjct: 194 FALIELHRRSKAGRSWALIRRGEMPALAAGVNVVFYQTWAFGLAGLLAGLSGGLLAGSVG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           ++    F  SE++++ ++ ++GG+           +L  V  L                 
Sbjct: 254 QLDGRAFAASESVLLFALSVVGGVYHWFGALITGLLLRAVPALLTDFG------------ 301

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                       AL   ++     +  
Sbjct: 302 VNGYLAMIFFGAALLHALVTAPAGIAG 328


>gi|26987355|ref|NP_742780.1| inner-membrane translocator [Pseudomonas putida KT2440]
 gi|148545908|ref|YP_001266010.1| inner-membrane translocator [Pseudomonas putida F1]
 gi|24982007|gb|AAN66244.1|AE016252_12 branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas putida KT2440]
 gi|148509966|gb|ABQ76826.1| inner-membrane translocator [Pseudomonas putida F1]
 gi|313496993|gb|ADR58359.1| Inner-membrane translocator [Pseudomonas putida BIRD-1]
          Length = 286

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 102/304 (33%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     +IY + A GL+I+ G L  ++      + +GAY           + WL + +
Sbjct: 9   LLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCY-TAVAVTGNFWLALLI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++  A    +    +K          ++++     I+ +   +  G  G  +A     
Sbjct: 68  APLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGPVGKNIAVPPEL 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                 IY  +  +++     +   + L L RT      R   ++ +
Sbjct: 128 RGV----------LILGDFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVRAGSESTE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L T I       FA+     G+AG  FA  R              I   +V++GGM
Sbjct: 178 TVSLLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGA--QPFVGPEILGIAFVVVVIGGM 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         ++  V  +   +              +    + ++  A+  VIL+R + 
Sbjct: 236 GSFGGALVGGLLVGVVQSMMTSL--------------WPQGASLMIYGAMAAVILVRPYG 281

Query: 339 LLRL 342
           L   
Sbjct: 282 LFGR 285


>gi|56709038|ref|YP_165083.1| ribose ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
 gi|56680723|gb|AAV97388.1| ribose ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
          Length = 375

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/325 (14%), Positives = 103/325 (31%), Gaps = 28/325 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLG---ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           RL  Y  I+  + +++ +LLF+ +           ++ + +   +Y+  A  ++ V+   
Sbjct: 16  RLEPYLAIIGPMVMIFAILLFMGVAEPARYFRLSNLNLILLDAALYMPMAMAMTFVITQR 75

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+     A+       L  +YG   W+ +P++ ++    G+I GL   +F+   L 
Sbjct: 76  G-IDLSIGSIAALSGILMAFLIKQYGFPAWVAMPLAIVLGATMGLINGLIITRFKVPDLI 134

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
                                     +Y    L      V +                F+
Sbjct: 135 GTL-------------------AMDLVYRGLALVIAKGLVLARFPDLITEMGRGQIPGFI 175

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
              ++      A     L RT       +I  N +A       +   K+ A+ +  A   
Sbjct: 176 PVPVVIGLLTMALGYWALTRTHFGRYTISIGSNPEASEMTGIAVDRHKIYAYVLMGASAA 235

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +AG       + I      +    ++ ++V+      GG  S+        +L  ++   
Sbjct: 236 LAGVMLTGKLNAIQATSAPYFNLHVIAAVVVGGTSLFGGRASMLGSLAGVLLLSMMINAL 295

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTL 323
             +   +F   +             
Sbjct: 296 VTLRIEFFWQSVASGAVIVSSVALY 320


>gi|83594636|ref|YP_428388.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
 gi|83577550|gb|ABC24101.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
          Length = 295

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/316 (15%), Positives = 110/316 (34%), Gaps = 26/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L +        +    I    Y + + GL+++ G L +++      Y +GA+    L  
Sbjct: 4   LLGVPLPVLWGQVLIGLINGSFYAVLSLGLALIFGLLNIINFTHGAFYMLGAFVSWWLLR 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+  W  + ++ +  G  G+++    LK       +  L+++     IL        G
Sbjct: 64  ILGIGYWPALILAPLAVGLFGIVLERLLLKPLYKLDHLYGLLLTFGLALILEGALRQGYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+  A      G           +   F+   ++  +V+L    +   + L + +T  
Sbjct: 124 VSGLPYAIPPSLQGA----------WNLGFMFLPVYRGWVVLASAVVCLVVWLLIEKTRA 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N     +    +     + + + +A    AG   A         +   +  
Sbjct: 174 GAVMRAATENPTLVKAFGINVPLLVTATYGLGAALAAFAGVLAAPIYSV--NPLMGSNLI 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+         L  +  L   +              +     T++ +
Sbjct: 232 IVVFAVVVIGGMGSILGAVLTGFALGVIEGLTKVV--------------YPEASATVVFV 277

Query: 327 ALFLVILMRSHSLLRL 342
            + LV+L++   L   
Sbjct: 278 IMALVLLVKPAGLFGR 293


>gi|116670463|ref|YP_831396.1| inner-membrane translocator [Arthrobacter sp. FB24]
 gi|116610572|gb|ABK03296.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Arthrobacter sp. FB24]
          Length = 328

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 85/297 (28%), Gaps = 29/297 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             +Y   +  + V     + L      S   + ++  Q     + A G++ V+     + 
Sbjct: 27  WRRYVIYIGFVVVFLFFAILLRDQGFLSPNNLLNIFRQTATITVIAVGMTYVISCA-EID 85

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+      + +    +  S++GL   +L  ++  +                         
Sbjct: 86  LSVGSVAGLSSVCTAMALSQWGLIPGILAGLAVGLVVGS--------------------- 124

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I   +   + I    +T G  GI V    +   +  + ++               +  ++
Sbjct: 125 INGALVSLLGIPSFLVTLGMLGIAVGVAQWITASAPQPILNDTFNMLFGSGDFGPVPGLV 184

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +      A   + L RT           N+ A           K     +S     +AG 
Sbjct: 185 VWSAIFVAIGAVVLNRTKFGRQVLATGGNRNAAEFTGINTKRIKFQVLLISGMVASVAGM 244

Query: 248 FFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELC 298
            +A          +   + +  I+ VIL      GG  S+        ++  +    
Sbjct: 245 LYAGRLQS-GRFQWGSGDELSAIAAVILGGTSLFGGFGSIMGTLFGALLIGLINNGL 300


>gi|319763121|ref|YP_004127058.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|317117682|gb|ADV00171.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
          Length = 297

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 88/304 (28%), Gaps = 16/304 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++    ++     + A GLS++ G +   ++  V     GAY    L S     +  L+
Sbjct: 3   QFVVDTVLRASDLALIALGLSMLYGLVKFPNVAHVQYAMFGAYVTYALQSGGFPLVVALL 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             S         +  L   +      AIA +    +   ++   + +             
Sbjct: 63  AGSVAAGLLTLGLQVLVFQRLLRGGPAIAMIGSLAVAMLVIAIMQGLAG----------- 111

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + +L R                Y++     L    +L L RT +  + R +  N
Sbjct: 112 --SFPRMFNLPRVEPLVIGGARIAWTQLYLMGTTIVLLVLFMLVLFRTRLGRSMRALSSN 169

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                +               S A  G+ G+  A S              + V +  ILG
Sbjct: 170 PMLANASGLNAERITYFVSFASGAIAGLGGSMLALSTGA--HINLGNDLLLPVFAAAILG 227

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +         ++         +NF                     +I L L +L + 
Sbjct: 228 GLGNPIGAVFGALLIALTETAVTNLNFGPLLGRELAFMPVGYISAGSFLILL-LALLFKP 286

Query: 337 HSLL 340
           + L 
Sbjct: 287 YGLF 290


>gi|117920519|ref|YP_869711.1| inner-membrane translocator [Shewanella sp. ANA-3]
 gi|117612851|gb|ABK48305.1| inner-membrane translocator [Shewanella sp. ANA-3]
          Length = 405

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 91/296 (30%), Gaps = 27/296 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +  +  +     + + G+S+V+   G + L+     AI       L     +S+  +I  
Sbjct: 97  LIDILNRSAPVALLSIGMSLVIA-TGGIDLSVGAVMAIAGAVCANLLLVPDISLVTVIAA 155

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++    G I G          +    L+M                  AG  VA  +  
Sbjct: 156 GLIVGLLAGCINGGLVSFLGIQPIVATLLLM-----------------VAGRGVAQLINQ 198

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                     F        +      ++++GM   S  ++   R+TA+      +  N K
Sbjct: 199 GQIITFQHPGFAAIGVGQFLGLPMPVWIVIGMLTFSQLLL---RKTALGLFIEAVGCNAK 255

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L       KL A+ ++     +AG    A       +       +  +  V++GG 
Sbjct: 256 ASRYLGINDKSIKLFAYGIAGLCAALAGMISTADIQGSDANNAGLWLELDAVLAVVIGG- 314

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
                 A        ++ +   +      + +         +  +  I +  V+L+
Sbjct: 315 -----AALTGGRFSLILSVVGALIIQTLATTIIVSGLPAKFNLLIKAIVILTVLLL 365


>gi|76809827|ref|YP_331683.1| branched chain amino acid ABC transporter ATP-binding/permease
           [Burkholderia pseudomallei 1710b]
 gi|167822080|ref|ZP_02453551.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Burkholderia pseudomallei 9]
 gi|167900676|ref|ZP_02487881.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Burkholderia pseudomallei NCTC 13177]
 gi|226193104|ref|ZP_03788714.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|254260156|ref|ZP_04951210.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a]
 gi|76579280|gb|ABA48755.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Burkholderia pseudomallei 1710b]
 gi|225934704|gb|EEH30681.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|254218845|gb|EET08229.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a]
          Length = 349

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 59/327 (18%), Positives = 116/327 (35%), Gaps = 23/327 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+A +  L     +    +  Y        L   + A G++++   LGL+ L+    +
Sbjct: 25  LALVATLGTLAAIALVVPAVADAYWIKTLTSALTVSIAAAGVALLYRQLGLVCLSQHALF 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G +   +  +  G    L +   A    A GMI GLP+L+ RG YLA+ TL+M+  FQ
Sbjct: 85  GVGGWI-ALRLAHLGAPFELCVLAGAAGGSAIGMIAGLPALRLRGLYLALVTLMMAGGFQ 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++        G                +    R           +   +  +     L+
Sbjct: 144 VVVSAIGFPDGGGG----------FTGHLSFGARQMMARPLVGQSDAAYFRYVAAWAALA 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++I   RR+    +W  IR  +    +    ++  +  AF ++    G++G   A S  
Sbjct: 194 FALIELHRRSKAGRSWALIRRGEMPALAAGVNVVLYQTWAFGLAGLLAGLSGGLLAGSVG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           ++    F  SE++++ ++ ++GG+           +L  V  L                 
Sbjct: 254 QLDGRAFAASESVLLFALSVVGGVYHWFGALITGLLLRAVPALLTDFG------------ 301

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                       AL   ++     +  
Sbjct: 302 VNGYLAMIFFGAALLHALVTAPAGIAG 328


>gi|302384698|ref|YP_003820520.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
 gi|302195326|gb|ADL02897.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
          Length = 351

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 95/317 (29%), Gaps = 27/317 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQ---------KYIDSMGIQILIYVM 51
           M++F  +L      L L  +V  LL  L    T  Q          YI  +  +    V+
Sbjct: 4   MTVFVKKLTGTRLFLPLFCLVLVLLSNLIKTPTFFQVTIKNGVLYGYIIDVINRASDLVI 63

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A G+++VV + G   ++     ++       + +    ++        +   A  +   
Sbjct: 64  LAVGMTMVVAASGGTDISVGAVMSVAGAVCCYILAGGQQTVNEFQNPYLLGVAAAVLAGI 123

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           L              L+     Q ++      T G+    +  R       V S      
Sbjct: 124 LCGC-------FNGYLVAKMKIQPMVATLILFTAGRGIAQLITRGQITYIRVESYKML-- 174

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                 I  I +   +     +     + L++T +    +T+  N +A   +        
Sbjct: 175 ---GASIPGIPVPTPVFVALLVVVLTYVLLKKTTLGLYVQTVGINSRASRLMGIKSTMII 231

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT------SLSKIA 285
             ++A      G++G   ++       +    +  +  I  V LGG +      SL    
Sbjct: 232 FLSYAFCGLCAGVSGLVASSRIYSADANNIGLNLELDAILAVALGGNSLGGGKFSLLGSV 291

Query: 286 KATAILIGVVELCCGMN 302
                +  +      M 
Sbjct: 292 IGAYTIQALSTTLYAMG 308


>gi|167038828|ref|YP_001661813.1| monosaccharide-transporting ATPase [Thermoanaerobacter sp. X514]
 gi|166853068|gb|ABY91477.1| Monosaccharide-transporting ATPase [Thermoanaerobacter sp. X514]
          Length = 388

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/359 (11%), Positives = 93/359 (25%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   +L  L  ++ +      G   + + I ++  Q     + A G+  V+   G + L+
Sbjct: 24  KLYTMLIALIAIWAIFSIATDGNFITPRNISNLLRQATSTGILAIGMVFVI-IAGQIDLS 82

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT--- 126
                 +      IL   Y ++  + I V+  I    G+  G            +     
Sbjct: 83  VGSLLGLTGGIAAILNVWYHVNGIVSILVALAIGVIIGLWNGWWVAYRNVPAFIVTLAGM 142

Query: 127 --------------------------------------LIMSEIFQNILIKWKPITNGKA 148
                                                 L +   F  + +          
Sbjct: 143 LVFRGILIGISKGYTIAPLSSDFQFIGQAYLTQNSGYLLGIIAAFLIVYLVLNSRKTKAK 202

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                  L      +  LI         +     +   +L +  L+        +T    
Sbjct: 203 YNLDIPPLGIDILKMTFLIILVGLFVFILNLYQGVPLSVLILLILALIFSYISSKTVFGR 262

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N +A       +    L  FA++      AG    ++ +  S    + +E   
Sbjct: 263 RVYAIGGNVEAAKLSGIDVKKITLILFAINGLLAAFAGILLTSTLNAASVSAGQNAELDA 322

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + VI      GG+ ++        ++  +      +N   F   +       +    
Sbjct: 323 IAASVIGGASLSGGVGTVFGAVIGALVMASIDNGMSMLNSPPFWQFVVKGLILLIAVWI 381


>gi|329908902|ref|ZP_08274985.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Oxalobacteraceae bacterium IMCC9480]
 gi|327546569|gb|EGF31545.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Oxalobacteraceae bacterium IMCC9480]
          Length = 315

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 50/320 (15%), Positives = 116/320 (36%), Gaps = 27/320 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M + GL+++   +G+L+      Y +GAY    + S      W  + V
Sbjct: 8   LLNGLSYGLLLFMLSAGLTLIFSMMGVLNFAHASFYMLGAYFAYTISSVL--GFWPALLV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ GA G ++    L+    Y  I  L+ +     ++++   +  G            
Sbjct: 66  APLLVGALGALVERYGLRSVHKYGHIPELLFTFGLSYVILEVVQLLWG---------RAT 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   +   +    F      + ++  +++L    +  +I L L RT I    +    +  
Sbjct: 117 VPYKIPDELDGALFTLYTTTFPVYRGFMMLIALLMLLAIYLVLTRTRIGLVIQAALTHPG 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    +  F    A  G+AG         ++      +   I+  +V++GGM
Sbjct: 177 TVEALGHNVPRVLMLVFGGGCALAGLAGVIGG--NAFVTEPAMAGTVGSIIFVVVVVGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD--------------CSFNMRHTTLM 324
            SL     A+ ++  +      +++   + L  F                + +     + 
Sbjct: 235 GSLVGALIASLLIGVLQTFAVAIDYSMISLLEVFGAQVTAMTPGYAVLKLTISQIAPIMP 294

Query: 325 VIALFLVILMRSHSLLRLRT 344
            + L L+++ R   L+  R 
Sbjct: 295 YLLLVLILIFRPKGLMGTRE 314


>gi|327441689|dbj|BAK18054.1| branched-chain amino acid ABC-type transport system, permease
           component [Solibacillus silvestris StLB046]
          Length = 287

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/301 (14%), Positives = 98/301 (32%), Gaps = 27/301 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     ++  + A GL+++ G + +L+      +  GAY+ V         +  ++   
Sbjct: 9   INGLATGMLIFLLAAGLTLIFGLMDVLNFAHGGLFVWGAYTGVFTYLWSNSFLVGIVVAI 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                   +   L      G+++    ++++  F  +L +   +  G  G+ V    Y  
Sbjct: 69  LTGLVLGFITEKLIIKPVYGNHVQQ--ILITLGFMLVLQEMIKVVFGPNGVPVKVPSYLA 126

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G+     +   ++    +I    ++            +   L RT I    R    N++ 
Sbjct: 127 GSWQIGDLTIIKYRIFIIIVGFALF----------GVLYFILNRTKIGLVVRAGVMNREM 176

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   I    L  F   +A   + G   A     +  +M      I+   +V++GGM 
Sbjct: 177 TQALGINIKRVFLIVFMCGAALAALGGMLMAPYSGVVYAEM-GMEYAILGFIVVVIGGMG 235

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S      A  ++            +   ++                I +  V++ R   L
Sbjct: 236 SFQGSLMAAILVGLAGSFMAYYVPFLSVAVNM--------------ILMASVLIFRPQGL 281

Query: 340 L 340
            
Sbjct: 282 F 282


>gi|320539243|ref|ZP_08038913.1| branched amino acid transport domain-containing protein [Serratia
           symbiotica str. Tucson]
 gi|320030635|gb|EFW12644.1| branched amino acid transport domain-containing protein [Serratia
           symbiotica str. Tucson]
          Length = 339

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 86/310 (27%), Gaps = 15/310 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +   +  +          +++ I ++  ++ IY + A G++ V+ + G + L+     
Sbjct: 26  ILIFMFLLLIFFQSQNSNFLTERNIFNILTEVSIYGIIAVGMTFVILTAG-IDLSVGSIL 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +   +      +                 I           +    T +    F 
Sbjct: 85  AVCAMTAAYVIKGDNFTTVDPNAWGGFSWLLGLGICLALGTIIGFIHGLGVTRLRLPPFI 144

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L            I     +       R   R      S           +     ++
Sbjct: 145 VTLGSMTIWRGLTLVINDVAPIAGFDAGYRWWGRGEMLGISIP---------IWIFAIVA 195

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L +T        I  N +A       +    +S + V     G+AG   +A   
Sbjct: 196 ILGYLVLHKTRWGRFIYAIGGNPEAARLAGVNVKRVLVSVYVVIGCLAGLAGFVLSARLG 255

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                     E  ++ S+VI     +GG   +S       I+  ++     MN   +   
Sbjct: 256 SAEAVAGISFELRVIASVVIGGTSLMGGYGRISGTIIGAIIMGILINGLVLMNVSAYYQQ 315

Query: 310 LKFDCSFNMR 319
           +       + 
Sbjct: 316 IITGLIIVLA 325


>gi|311277945|ref|YP_003940176.1| inner-membrane translocator [Enterobacter cloacae SCF1]
 gi|308747140|gb|ADO46892.1| inner-membrane translocator [Enterobacter cloacae SCF1]
          Length = 344

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 80/301 (26%), Gaps = 27/301 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             L  +    +L     A  S + +  +     I  + A G ++V+     + ++     
Sbjct: 12  AFLAILALFAVLVALNPAYLSLQTLAMIFASSQILCLLALGATLVM-LTRNIDVSVGSTV 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A +  +  +        +    A+ + A      L         +A    +      
Sbjct: 71  GLCAIAVGVALNNGYGLAAAIAFALAIGALAGAFNGVLVVGLRIPAIVATLGTLGLYRGV 130

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +L        G                                  I +  +   +  L 
Sbjct: 131 MLLWTGGKWIEG---------------------LPDSLKLLSAPAFIGVSPLGWLVLALL 169

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RTA    +  + DN  A   L   +   +++AF ++       G  FAA   
Sbjct: 170 LVGAWLLSRTAFGRDFYAVGDNLAAARQLGVAVNRTRIAAFTLNGMLAACGGIVFAAQIG 229

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +        E   + + V     +LGG  +L         L  +  +        + + 
Sbjct: 230 FVPNQTGSGLEMKAIAACVLGGISLLGGTGTLIGAFLGAFFLTQIDTVLVLFKLPAWWND 289

Query: 310 L 310
            
Sbjct: 290 F 290


>gi|4499778|emb|CAB39281.1| NatC protein [Anabaena sp.]
          Length = 377

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 62/173 (35%), Gaps = 3/173 (1%)

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           I +  +  V L +       + +L R+      + IR++++   ++   + + KL +  +
Sbjct: 208 IPKAGLMLVSLLVLAFVFWRLEYLVRSPWGRVLKAIREDEEIGKAMGKNVFWYKLQSLML 267

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
             A  G+AGAFFA     I PD F+         +VILGG  +         I      +
Sbjct: 268 GGAIAGIAGAFFAWQISAIYPDNFQPQLTFDSWIMVILGGAGNNIGSILGAVIYFAYDAI 327

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              +                      + + L ++++ R   +L  +      +
Sbjct: 328 TREVLPKIIPLDEA---RLGAFRIMCIGLILMVLMIWRPQGILGKKEELTLGK 377



 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 62/155 (40%), Gaps = 1/155 (0%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y+  + I    + +F+ GL++  G  GL++   +    +GAY+ V+L  +        I 
Sbjct: 4   YLIFLAISTATFALFSLGLNLQWGFTGLINFGHIAFMTLGAYTTVLLSLKGVPLFISAIV 63

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            + + +   G+++G  +L+ R DYLAI T+   E+ + ++                    
Sbjct: 64  GA-IFAALLGLVIGFATLRLREDYLAIVTIGTGELIRLVVNNQDLPVGDTWVSGAFGVQS 122

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           +          FFR     ++  +F   V     +
Sbjct: 123 YPIPLSTEPNLFFRLLMIGILTLLFAVTVFSLWRW 157


>gi|89901167|ref|YP_523638.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89345904|gb|ABD70107.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 315

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/320 (15%), Positives = 115/320 (35%), Gaps = 27/320 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  M + GL+++   +G+L+      Y +GAY    + S   +  W  + V
Sbjct: 8   LLNGISYGMLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYTVTSL--IGFWAALLV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  G       L+    +  +  L+++     I+++   +  G            
Sbjct: 66  APVLVGLVGAAFEKYFLRRVHKFGHVPELLITFGLSYIILELVQLVWG---------RSS 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   V   +    F      + ++  +++     +  +I L L RT I    +    + +
Sbjct: 117 VDYRVPVALDGPLFTLFGTQFPMYRGFMMGVALLMLMAIWLLLTRTRIGLVIQAALTHPE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    +  F    A  G+AG         ++     FS   ++  +V++GGM
Sbjct: 177 MVEALGHNVPRVFMLVFGGGCALAGLAGVIGG--NAYVTEPSMAFSVGGVIFVVVVVGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT--------------TLM 324
            SL+    A+ ++  +      ++    ++L     +                     L 
Sbjct: 235 GSLAGAFLASILIGVLQTFAVAIDASLMSALQTVGVTLTPSTFGYALWKLKLSQVAPILP 294

Query: 325 VIALFLVILMRSHSLLRLRT 344
            + L L+++ R   LL  R 
Sbjct: 295 YLFLVLILIFRPKGLLGTRE 314


>gi|13475899|ref|NP_107469.1| ribose ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
 gi|14026658|dbj|BAB53255.1| ribose ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
          Length = 333

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 94/316 (29%), Gaps = 28/316 (8%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            +L  LA++  +   L      S + + ++G+ + I  + A   ++V+   G L +    
Sbjct: 32  SLLVALAILIIIFGSLRGDVFFSSRNLLNIGLGVTILGVLAMSQTVVI-VAGGLDIAVGA 90

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
              +   S  +             P + +++G     +          Y  +  +I +  
Sbjct: 91  TVGLTTVSTAMAIQAT------GSPAAGIVAGLVLGGLAGLVNGLIITYGRVNAVIATLG 144

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
              I      I +    I                I    F    +   + +  ++  +  
Sbjct: 145 TMAIFRGIAFIMSDGQSI---------------AIFSDTFRFIGIGRILGLPLLVWILVL 189

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            + +  L+L R+ +      +  N          I   ++  + +S    G+AG   AA 
Sbjct: 190 TAIAFHLFLARSIVGRNIYALGGNPVVARFSGININRYRVGIYIMSGVAAGLAGILLAAR 249

Query: 253 RDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                P        +  I+  +L      GG  ++       AI+  +       +   F
Sbjct: 250 TGSGQPVSGSQGLELEAITAAVLGGCALQGGKGTIVGALLGVAIIGVLNNGMILTSVPTF 309

Query: 307 NSLLKFDCSFNMRHTT 322
             LL       +    
Sbjct: 310 YQLLAKGSLLILAVVI 325


>gi|186683957|ref|YP_001867153.1| inner-membrane translocator [Nostoc punctiforme PCC 73102]
 gi|186466409|gb|ACC82210.1| inner-membrane translocator [Nostoc punctiforme PCC 73102]
          Length = 288

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 83/288 (28%), Gaps = 13/288 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      I  + A GL++  G L L +        +GAY   ++ S        +I  
Sbjct: 9   IINGIAVGSIIALAAVGLTLTYGILRLSNFAHGDFLTLGAYLTWLINSIGVNIWLSMILA 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +     A  +   L   K R       TLI+  I   + ++                ++ 
Sbjct: 69  AVGTVAAMLLSEKLLWSKMRSIRATSTTLIIISIGLALFLR-----------NGIIFIWG 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L          +        VL        ++   L+ T I  A R + D+  
Sbjct: 118 GKNQNYNLPVTTALDIFGLKVPQNQLLVLGLAILAIFALHYLLQNTKIGKAMRAVADDLD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   +       + ++     + G+ +             +   + + + VILGG+
Sbjct: 178 LARVSGINVDRVIFWTWLIAGTLTSLGGSMYG--LITAVRPNMGWFLILPLFASVILGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            +      A  I+  V E+        +   +       +       +
Sbjct: 236 GNPYGAIAAAFIIGIVQEISTPWLGSQYKQGVALLIMILVLLIRPKGL 283


>gi|225569919|ref|ZP_03778944.1| hypothetical protein CLOHYLEM_06014 [Clostridium hylemonae DSM
           15053]
 gi|225161389|gb|EEG74008.1| hypothetical protein CLOHYLEM_06014 [Clostridium hylemonae DSM
           15053]
          Length = 333

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/318 (13%), Positives = 95/318 (29%), Gaps = 29/318 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +  I  LL V+  +L  LF     S     ++ +      +   G+  V+ + G + L+ 
Sbjct: 15  FKNIPLLLFVIIFVLFGLFSPKFLSMASFSNIILNSSYVGIIGIGIMFVLLTAG-IDLSV 73

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                + A S  +L +R+ +   + +     ++   G+      +K +          M+
Sbjct: 74  GSVMYLSAASTGLLIARFHVPTAVGVCAGIGVALLVGLFNAFCIIKLKILPFVTTLGTMT 133

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                                    L    T   S+       S        +   +L  
Sbjct: 134 AG---------------------RALGTWMTHSESVNLPKSITSLGSQKIAGIPMAILLF 172

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++A+  L+L RT +      + ++ +       +      + + +S+   G+ G    
Sbjct: 173 LLIAAAAALFLARTRLGRQVYAVGNDPEDARKAGISNNKILFTVYMLSALLAGIGGIISV 232

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFY 304
           A    ++   F   E    I+  +LGG         +S       ++  +      M   
Sbjct: 233 AQIGIVNA-SFGKGEEFNAIAAAVLGGTSLAGGSGKVSGTILGAVMIQMIQSGLVYMQVD 291

Query: 305 YFNSLLKFDCSFNMRHTT 322
            +   L       +    
Sbjct: 292 MYIQPLISAGIIFLAVFL 309


>gi|154245448|ref|YP_001416406.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154159533|gb|ABS66749.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 291

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/299 (15%), Positives = 87/299 (29%), Gaps = 23/299 (7%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  LIY + A GLS++ G + +++        I  Y+   L     L   ++ P+   +
Sbjct: 14  LLMGLIYALIAVGLSLIFGLMDVVNFAHGEFLMIAMYATFGLVLWTTLDPIVVAPLVVGL 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G  + +  ++        A    +      +     +     G           + 
Sbjct: 74  MFCVGAFVYVAVVR-------YAMRTKANAGMVQIFSTFGLAILIQGGAQYFFTPDYRSI 126

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             S +       + +       Y  L      A++ L   RT    A    R++Q A   
Sbjct: 127 KTSWLGGHTLDLAGIFLPWPQIYGGLISIAAFAALSLIS-RTDFGKALEATREDQGAVAL 185

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +           + + +A +G+AG   A            F     V   V LGG  S+ 
Sbjct: 186 VGINRNKVFAVGWGLGAALVGLAGTVLAIFYYIHPQVGATFGTIAYVT--VALGGFGSVF 243

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
               A  I+  V  +   +      ++              +      V+  R   L  
Sbjct: 244 GALVAGVIVGLVEAITALILPPTMKAVG-------------IYALYLAVVFFRPSGLFG 289


>gi|332798482|ref|YP_004459981.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp.
           Re1]
 gi|332696217|gb|AEE90674.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter
           sp. Re1]
          Length = 344

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/317 (13%), Positives = 87/317 (27%), Gaps = 23/317 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    ++  ++  +      S + I ++  QI   ++   G S V+   G + L+     
Sbjct: 25  VTFGLIIICIVFGILNPIFFSSRNISNLLRQIAPILIIGIGQSFVL-ITGNIDLSIGSVI 83

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       + ++     W+ + ++       G+  G      +      ATL    I +
Sbjct: 84  GMSCMISATMMTKGVN-PWVAVVITFFCCLVVGVTNGQLVASCKLPPFI-ATLGTMTIAR 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I        N  +    A+                          + +Y  +     L 
Sbjct: 142 GIAQIVNNNYNTDSIGAAANGFRNFFYY---------------GKILGIYNTIWIAVVLW 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L +T        I  N +A       II    +A+ VSS      G    A   
Sbjct: 187 LVFNFILSKTRTGRYIYAIGSNIEASRLSGVNIIATTTTAYVVSSICACTVGLITCAISG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + D     E   V + VI     LGG   L       +I   +               
Sbjct: 247 MGTMDAGTGYEMFAVAASVIGGVSTLGGQGILLGTVVGASIWGVLQNGLQFAGAPVAIRN 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 IVIGIIVVVSVLLDVIV 323


>gi|307727314|ref|YP_003910527.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|307587839|gb|ADN61236.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
          Length = 328

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 98/310 (31%), Gaps = 25/310 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+             S + +  +  Q ++  + A G +++V   G + L+C +  A
Sbjct: 27  LIALVLACAFFISQSSRFLSFQNLSLILQQTMVVAVIAIGQTLIV-LTGGIDLSCGMVMA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            G+          GL   + I      S   G++ G+   + +     +    ++  F  
Sbjct: 86  FGSIIMTKFAVTLGLPPVVAILCGIGASTLFGVLNGVLITRIKLPAFIVTLGTLNIAFAL 145

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             I                      +          F ++F +    + Y  +    +  
Sbjct: 146 TQIY-----------------SNAESVSNLPDAIMFFGNTFKLGPADVTYGTVLTLLMYL 188

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    LR T        + +N +A   +  +     L+ + ++ A  G+A A  A SR  
Sbjct: 189 ATWFVLRDTVPGRHLYALGNNAEAARLMGLSSQKILLTVYTLAGAIYGIA-ALLAVSRTG 247

Query: 256 ISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           +       +EN+  I+ V+L      GG  S++       I+         +       +
Sbjct: 248 VGDPQAGQTENLDSITAVVLGGTSLFGGRGSIAGTLLGALIVGVFRNGLTLIGVSSVYQV 307

Query: 310 LKFDCSFNMR 319
           L       + 
Sbjct: 308 LITGMLVILA 317


>gi|229823067|ref|ZP_04449136.1| hypothetical protein GCWU000282_00362 [Catonella morbi ATCC 51271]
 gi|229787506|gb|EEP23620.1| hypothetical protein GCWU000282_00362 [Catonella morbi ATCC 51271]
          Length = 327

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/330 (16%), Positives = 112/330 (33%), Gaps = 28/330 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQIL----IYVMFAWGLSIVVG 61
           ++L K   +  L+A++  +++F F   +          + IL         A G++ V+ 
Sbjct: 9   MKLEKTVGLQKLIALIALIVIFGFFAISSESFRSFDTAVSILDASYYIGFLAIGVTFVII 68

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           + G + L+        A    +L ++ G  +WL +    +I G  G+  G+   KF    
Sbjct: 69  TSG-IDLSIGTVMMCSAIIGGVLHTKLGWPLWLSLLAILVIGGVFGLFNGILIAKFGLPP 127

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                           +    I+ G + I    +             +     +   +  
Sbjct: 128 FIAT------------LGTMMISRGLSSIVSNVQSVTFPLRGTGEGWYKDLFRTKDNFPT 175

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +  +++     +      L +T I      I  N++A       +I  +  A+ +S  F
Sbjct: 176 GLIVLIIIAIIAAIV----LNKTKIGRYIFAIGSNKEATRLSGVNVIKWEAMAYVISGLF 231

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+AG  +AA+   I P      E   +  +V+      GG+ S+        I+  +  
Sbjct: 232 AGLAGIAYAATYSTILPGTGNGMELDAIAGVVVGGTSLAGGVGSVLGTIIGVFIMSVLKI 291

Query: 297 LC--CGMNFYYFNSLLKFDCSFNMRHTTLM 324
                 +  +Y   +  F     +    L+
Sbjct: 292 GLPYIDLQPHYQLFITGFVVIIAVYSDILI 321


>gi|221369807|ref|YP_002520903.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131]
 gi|221162859|gb|ACM03830.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131]
          Length = 325

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 100/320 (31%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+  + ++ L+ +   +L+ L   A      + S+    ++  + A G+ +V+   G + 
Sbjct: 4   LHSTEFVIVLVLLAAMVLIGLVNPAFWGLDNLFSLAKSNVVIGIMALGVLLVM-ISGGID 62

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++         Y  V           L+  ++A   G          ++       I TL
Sbjct: 63  VSFPAIAVAALYIVVRAMVELNYDGVLVPFLAAAAIGLVLGGFNAFIIERFRMIPLIVTL 122

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             + I + +++       G  G  + +        +           +       +  ++
Sbjct: 123 GTASIVRGLVL-------GLLGSSIVNINKMPKELIEFGRHDLMTVEAANGATYGLTSMV 175

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    ++  + L LR T I  +      + ++               + ++    G AG 
Sbjct: 176 LVYLGIALVMHLVLRHTMIGRSVYAYGTDAESARRAGFNTRRTIWFVYCLAGLLAGFAGM 235

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
              +   + +P  F+  E  ++ ++V     I GG  S++       +L+ V      + 
Sbjct: 236 LHTSMIWQANPRDFQGLELDVIAAVVLGGASIFGGRGSVAGTLIGVFMLVMVKNSLILLK 295

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
                  +            
Sbjct: 296 VDTTWQRVVVGLIIVAATAI 315


>gi|84495368|ref|ZP_00994487.1| putative permease abc transporter protein [Janibacter sp. HTCC2649]
 gi|84384861|gb|EAQ00741.1| putative permease abc transporter protein [Janibacter sp. HTCC2649]
          Length = 340

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 88/303 (29%), Gaps = 21/303 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             L ++  +  F+      +   +  +  Q  +    A G ++V+ + G + L+      
Sbjct: 36  LFLLLIAFIAFFVATPTFLTASSMGILLQQTAVVAALAVGQTLVILTAG-IDLSVGSIMV 94

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L     +   + +    +++   G I GL   +                   
Sbjct: 95  LSMMVMATLSKDGNMPGIVGLIAGLLLATGAGAINGLLVTRINLPPF------------- 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I+        G   +  +       + +  LI F         + +    V++ + +L  
Sbjct: 142 IVTLGTLSIFGAIALLYSGGSSIQASHLPDLINFLGDGFGIGSFRLTWGIVVVALIYLVM 201

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           + +L   +TA       + D+ ++            L+ + V+    G+A          
Sbjct: 202 AFVL--SQTAWGRYVYAVGDDPESARLSGVPSKRILLTVYTVAGLIYGIAAWILIGRAGA 259

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            +P+    +    + ++VI      GG   L        I+         +        L
Sbjct: 260 ATPNAIPDANLQSITAVVIGGTSLFGGRGRLVGTLIGALIVQTFAFGLSQLGVDQQWRYL 319

Query: 311 KFD 313
              
Sbjct: 320 SIG 322


>gi|326800022|ref|YP_004317841.1| ABC transporter transmembrane protein [Sphingobacterium sp. 21]
 gi|326550786|gb|ADZ79171.1| ABC-type transporter, integral membrane subunit [Sphingobacterium
           sp. 21]
          Length = 322

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 85/312 (27%), Gaps = 16/312 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  ++L        +     ++  QI + +  + G+++++ + G + L+     A
Sbjct: 14  LIALVLMCVILSFLSDKFLTPANGWNVLRQISVNICISVGMTLIILTAG-IDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                   L           + V   + G     + + +          A    + +   
Sbjct: 73  FSGAVVAGLLKFGIEMPSYDLYVGFTLLGGVLSGLLVGA----------ALGAFNGLVIT 122

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  +                            F      + + +  ++     +  
Sbjct: 123 KFKVPPFVATLAMLTIARGFTMLWTKGYPISSLGKEFAYIGTGWFLGVPVLVWIAALIVI 182

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             I+   RTA       I  N+ A       I   K+  + ++     + G    +  + 
Sbjct: 183 GAIILTNRTAFGKYIYAIGGNENAARLSGININRVKIWVYTLAGILAAIGGIMVTSRLNS 242

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P+     E   + ++VI      GG  +++       I+  +      M+   F   +
Sbjct: 243 AQPNAGLSYELDSIAAVVIGGTSLAGGRGTIAGTVLGAMIIGILNNGLVLMDVSPFWQQV 302

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 303 VKGAVILLAVMI 314


>gi|254520058|ref|ZP_05132114.1| inner-membrane translocator [Clostridium sp. 7_2_43FAA]
 gi|226913807|gb|EEH99008.1| inner-membrane translocator [Clostridium sp. 7_2_43FAA]
          Length = 340

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/310 (10%), Positives = 86/310 (27%), Gaps = 6/310 (1%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  +   +      S K   ++  Q     + A G++ ++   G   L+     
Sbjct: 20  LYIVLFIMIVFFVIKEPGFLSLKNFTNILSQASTRGILALGVAGLIVLQG-TDLSAGRIL 78

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A     L      +  +   + A+      ++  +    F          +    F 
Sbjct: 79  GFTAIISASLLQSTTYAARMYPDLPALPLILPMLLAIVIGGIFGAINGFGVAKLKVHAFI 138

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L                  L                     +  + + Y++  +  ++
Sbjct: 139 ITLGTQLIAYGASCLYIDRPPLGAQPVANLDERYTRFVNGYLKLGSVEIPYLVFYLAIVA 198

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A +     +T +      I  N +A       ++   +  F +S    G+AG   AA   
Sbjct: 199 AIMWFVWNKTKLGKNMFAIGGNPEAAAVSGVNLVKNIMIIFVISGVLYGLAGFLEAARAG 258

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E   + + V+      GG+ ++  +   T +L  +      +    +   
Sbjct: 259 STTTSTGFNYELDAISACVVGGVSFTGGIGTIPGVLIGTVLLQVINYGLNFIGVNAYWQY 318

Query: 310 LKFDCSFNMR 319
           +       + 
Sbjct: 319 IIRGLIIIVA 328


>gi|209520092|ref|ZP_03268867.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209499465|gb|EDZ99545.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 291

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 85/289 (29%), Gaps = 7/289 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G +++ G  G+L+L       + A    +L    GL  +L   +
Sbjct: 7   LVDGFAISSLYALGAIGFTLIFGVSGILNLAHGGVMLVAALMGWMLAGEAGLGTYLGTLL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +                        +  +    + I +    +  G         L+ 
Sbjct: 67  GVLAGLVT-----AFVTYLMVVRPIQRSAAIPGEEKEIFVLTGTLLWGIMIQQGMAWLFT 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +         V        + +    +   + L++ RT    A      N +
Sbjct: 122 DNPVTIRPLISGVAMVGGVRVPFNEIMIAVVCWAVIGLLWLFVNRTRSGKALLAASMNPR 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +    L A+++     G+AG   A+     + +  + +      SIV+LGG+
Sbjct: 182 GLTLLGFELSRIYLLAWSIYGLLAGVAGVLLASFLGVSTNNAGQLT--ASAFSIVVLGGL 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            S+S    A  ++  +  +   +       L        + +       
Sbjct: 240 GSVSGSLMAAYVVGYLETITAYLVAPTLRPLPALLLLVLVVYVRPQGFL 288


>gi|167919288|ref|ZP_02506379.1| ABC transporter, permease/ATP-binding protein [Burkholderia
           pseudomallei BCC215]
          Length = 307

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 104/303 (34%), Gaps = 12/303 (3%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            LA +  + L +       + ++     Q    ++ A   ++++G+ GLLS        +
Sbjct: 4   ALAWLAFVALLVVPALAWPRGWMLGYLAQTAAMIVLALSYNLLLGTTGLLSFGHAAFAGL 63

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA+      +RYGL + L+         A G + G  + +  G   A+ TL + E+    
Sbjct: 64  GAFVAAHGFNRYGLPLPLVPLAGGAAGAAFGALFGFVATRRAGTAFAMITLGIGELVAAA 123

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G  G+ +                            +  Y ++   C ++A 
Sbjct: 124 AWSVPEWFGGAGGVSI------------DRAAGPALAGWEFGKPMHAYALIAAWCVVAAV 171

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +  L RT ++     +RDN     +L T     + +    ++ F G+AGA      +  
Sbjct: 172 AMRVLVRTRLARLANAVRDNPARVAALGTDPCRVRFAMAIAAAFFAGVAGALTLIDVEVA 231

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + +      +  V+   ++GG T+         +L         ++  +   L     + 
Sbjct: 232 TAESVGMLRSGAVLFATVIGGTTAFFGPVVGAVLLTFFSVFVASVSRAWLLYLGLLFVAV 291

Query: 317 NMR 319
            + 
Sbjct: 292 VLA 294


>gi|26989488|ref|NP_744913.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Pseudomonas putida KT2440]
 gi|24984358|gb|AAN68377.1|AE016470_6 branched-chain amino acid ABC transporter, permease protein,
           putative [Pseudomonas putida KT2440]
          Length = 329

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 60/337 (17%), Positives = 120/337 (35%), Gaps = 42/337 (12%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L      L  F+ +    +  +  ++ I  L+  +   GL+++ G  G LSL      A+
Sbjct: 27  LGLAALVLFAFIGVPLLGNDYWFSAILIPFLLLSLAGLGLNLLTGYAGQLSLGSAAFMAV 86

Query: 77  GAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GA++          L +   + +  +++    ++ GLPSL+ +G YL ++TL        
Sbjct: 87  GAFAAYNFELRVAWLPLLASLLLGGLVAALVAVVFGLPSLRIKGFYLLVSTLAAQFFVPW 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L ++   +N  A                                        G+     
Sbjct: 147 ALTRFSWFSNDSAS---------------------------------------GVISALF 167

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA-SRD 254
            +   L R+ +   W  +RD   A   +   ++  KL AFA+S  ++G+AG+ +A     
Sbjct: 168 WLGANLVRSELGRNWMAVRDMDTAAAVIGIPLLKTKLLAFAISGFYLGVAGSLWAFTYLG 227

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            + P  F  + +  ++ I+I+GG+ S+       A ++    L   +      + L    
Sbjct: 228 TVEPHGFDLNRSFQILFIIIIGGLGSILGNFLGAAFIVLFPVLLSNLAG-LLPTGLIDAG 286

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                        + + ++     L RL        R
Sbjct: 287 QIENLQKIAFGTLIIIFLIKEPEGLARLWQRFRERAR 323


>gi|115525849|ref|YP_782760.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115519796|gb|ABJ07780.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 335

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 101/334 (30%), Gaps = 40/334 (11%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-------------G 85
           I +   +   Y + A GL++  G+LG+++      + +GA+  V+               
Sbjct: 8   ILNGLDKGGAYALIALGLTLAFGTLGVVNFAHGALFMLGAFCAVVFNKLLTLETIRVDPT 67

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL--AIATLIMSEIFQNILIKWKPI 143
                   L I    + +        L         L      L++  I +  LI++   
Sbjct: 68  QMTPWGSPLEIKTPYVQAMLGDWGKLLIDYSVPVSILLAIPVMLLIGIIIERGLIRFFYK 127

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF--------------VIYEIFMYYVLLG 189
                 I V   L  +   +          +                ++Y  +    L  
Sbjct: 128 RPHADQILVTFGLAIVLQEIVKHFFGANPIAQSAPHVFSGSLQLTEAIVYPYWRIVYLAF 187

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              + A++  +L+ T      R    +++    L   I       F +++   G+AG  +
Sbjct: 188 SLVVIAAVFAFLQLTTFGMVVRAGMQDRETVGLLGINIERRFTIVFGLAAVVAGLAGVMY 247

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                        F     V+ +V    M SL     A  +L  +           F S+
Sbjct: 248 TPIVPPDYHMGMDFLVLSFVVVVVGG--MGSLPGAVLAGFLLGILQS---------FASM 296

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            +           ++ +   +++L+R   LL  +
Sbjct: 297 NEVKNLVPGIDQIIIYLVAVVILLVRPRGLLGRK 330


>gi|298491575|ref|YP_003721752.1| inner-membrane translocator ['Nostoc azollae' 0708]
 gi|298233493|gb|ADI64629.1| inner-membrane translocator ['Nostoc azollae' 0708]
          Length = 371

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/338 (12%), Positives = 100/338 (29%), Gaps = 12/338 (3%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG---------SLGLLSLNCVI 72
              +                +    +   + A  L +V+G          LG++++    
Sbjct: 37  IAFMTLGAYTTVLLSLKGVPLLFSTIAGAIVAALLGLVIGFATLRLREDYLGIVTIGTGE 96

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
              +   +  +  +   +S    +    +       +     +      L I T+     
Sbjct: 97  LVRLVINNQELPIANTWVSGAFGVQSYVIPLNTTPSLFLRLLMIGVLTLLTIITVFCLWR 156

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           +     K     N +           LG  + ++             +  +  + L +  
Sbjct: 157 WVKTARKSPSNCNNQEFFSGLIVGIILGVLLLTIYVAGVMGLYNYNPKAGLMLLALLVLA 216

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
                +  L ++      + IR++++   +L   + + KL +  +  A  G+AGAFFA  
Sbjct: 217 FVFWRLELLVKSPWGRILKAIREDEEIPKALGKNVFWYKLQSLMLGGAIAGIAGAFFAWQ 276

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              I PD F+         +VILGG  +         I      L   +        ++ 
Sbjct: 277 LSAIYPDNFQPQLTFDAWIMVILGGSGNNIGTILGAVIYFAYDALTRELLPKIVPLDVE- 335

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                      + + L ++++ R    L  +      +
Sbjct: 336 --RIGAFRIMFIGLILMVLMIWRPQGFLGKKEELTLGK 371



 Score = 46.4 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 67/159 (42%), Gaps = 1/159 (0%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y+  + I    + +F  GL++  G  GL++   +    +GAY+ V+L  +    ++  I 
Sbjct: 4   YLIFLAISTATFTLFGLGLNLQWGFTGLINFGHIAFMTLGAYTTVLLSLKGVPLLFSTIA 63

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            + +++   G+++G  +L+ R DYL I T+   E+ + ++   +                
Sbjct: 64  GA-IVAALLGLVIGFATLRLREDYLGIVTIGTGELVRLVINNQELPIANTWVSGAFGVQS 122

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           ++     +   F R     V+  + +  V     ++  +
Sbjct: 123 YVIPLNTTPSLFLRLLMIGVLTLLTIITVFCLWRWVKTA 161


>gi|220910931|ref|YP_002486240.1| Monosaccharide-transporting ATPase [Arthrobacter chlorophenolicus
           A6]
 gi|219857809|gb|ACL38151.1| Monosaccharide-transporting ATPase [Arthrobacter chlorophenolicus
           A6]
          Length = 332

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 90/313 (28%), Gaps = 26/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +L VV  + L        +   I ++  Q  I  + A G++ ++ + G + L+     
Sbjct: 35  IIILFVVILVFLAAAAPNFLTLNNIVNVVRQSSIIGLIALGMTFIMITAG-IDLSVGSVV 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +   ++ +L    G + WL +     +    G                 A +++     
Sbjct: 94  GLAGMTFALLAPDSGGAFWLPLIAGLGVGLLVG--------------FLSAAMVVWGAIL 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L     +   +    V      +                 V   + ++ V   +C   
Sbjct: 140 PFLATLATMAIARTAALVITDGQVVSGLSGPAEWLGSGFLGPVPVPVIIFLVAAIICEFV 199

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                   RT   +    +  N+++   +  +        + +      + G    A  D
Sbjct: 200 L------SRTKFGSHVYAVGGNEESAKKVGISTSRVLFMVYLIGGVTAALGGLVLTARLD 253

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +P      E  ++ ++VI      GG+ ++        +L  V+     M    +   
Sbjct: 254 GAAPVAGTGYELQVIAAVVIGGTSLFGGVGTIRGTVIGVLLLGVVMNGMNLMGVSSYFQQ 313

Query: 310 LKFDCSFNMRHTT 322
                   +    
Sbjct: 314 GVQGVILVLAVLL 326


>gi|114770346|ref|ZP_01447884.1| branched-chain amino acid ABC transporter, permease protein [alpha
           proteobacterium HTCC2255]
 gi|114549183|gb|EAU52066.1| branched-chain amino acid ABC transporter, permease protein [alpha
           proteobacterium HTCC2255]
          Length = 345

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/337 (12%), Positives = 89/337 (26%), Gaps = 40/337 (11%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---------------- 82
           I +   +   Y + A GL+++ G+LG+++      + +GA+  V                
Sbjct: 8   ILNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMLGAFCAVSLQKLMSVSKITIDPS 67

Query: 83  --------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSL--KFRGDYLAIATLIMSEI 132
                   +      +  W    V  +I      +  + ++       Y+    LI    
Sbjct: 68  QLDFLGNPLKVKTPYIVEWFGPNVGNVIIDWNVPLSIIVAIPVMLSIGYIMERGLIKHFY 127

Query: 133 FQNILIKWKPITNGK--------AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            +    +                A                              Y  +  
Sbjct: 128 KRPHADQILVTFGLAIVIQELVKANYGANPIPTPAPDQFVGSFNVGALIGLDASYPYWRL 187

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
                   + +++  +LR T      R    +++    L   I       F +++A  G+
Sbjct: 188 IYFAFSAVIISAVFAFLRFTTFGMVVRAGMADRETVGLLGINIDRRFTIMFGIAAAVAGL 247

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG  +             F     V+ +V    M SL     A  +L  +          
Sbjct: 248 AGVMYTPINSPNYHMGMDFLVLSFVVVVVGG--MGSLPGAVLAGFLLGILE----SFASM 301

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                             ++ +   +V+L R   L+ 
Sbjct: 302 NEVKGFFEMLYLPSIDQIIIYLVAIIVLLTRPRGLMG 338


>gi|86751525|ref|YP_488021.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86574553|gb|ABD09110.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 295

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 100/293 (34%), Gaps = 26/293 (8%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           IY + A GL+++ G L +++        +G Y+  +     GLS W  + V+ +++   G
Sbjct: 21  IYALIAVGLALIFGVLEVINFAHGELLMLGGYAMALTLPLVGLSYWPSLLVAVIVTSLVG 80

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +++    L+  G      +++ +     IL+             +          V +  
Sbjct: 81  VVLYEVFLRHIGQKEFERSILTTLGISMILL-----------YGMQYLFTATPMMVDTAY 129

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
            F       +   +               +   LR T    A R I  N++A   +    
Sbjct: 130 GFDGVQIGSIRITLTRLIAGALSVAAFTGLYCLLRFTQFGRAMRAIAQNREAALMVGIKP 189

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
                +A A+++A  G+AGA  A  +          +      ++V++GG+ +++     
Sbjct: 190 RHVARNAVALAAALCGLAGAALAPIQLL--HPAMGQAMIFKAFALVVIGGLGNMTGAVVV 247

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
              L  +     G     +                 + + + + +L+R   L 
Sbjct: 248 AIALGMIESWIGGFFSIVWQEGA-------------IFVIMIVAVLLRPDGLF 287


>gi|312126899|ref|YP_003991773.1| inner-membrane translocator [Caldicellulosiruptor hydrothermalis
           108]
 gi|311776918|gb|ADQ06404.1| inner-membrane translocator [Caldicellulosiruptor hydrothermalis
           108]
          Length = 332

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/321 (13%), Positives = 101/321 (31%), Gaps = 21/321 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +  V   +++ +      + + I  +     I  +   G+ +V+     + L+     
Sbjct: 20  LLIFIVGLSIVVQIRNPRFLTFENISDLLTNTAILAILTVGMMLVI-VTRGIDLSVGSVL 78

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      ++ S+Y     ++  +  +  GA   ++    +        IATL    I++
Sbjct: 79  ALAGMISALIVSKYQNVSPIVAILIGIFVGAICGVINGFLISKTNILPIIATLGTMNIYR 138

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I                       G  V +      F        + +  +++      
Sbjct: 139 GITYMISK-----------------GQWVSADEMPLSFKRIATGSILGINNLIVVAIITY 181

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                +++ T        I  N +A       +    L+ + +     G+AG  + +   
Sbjct: 182 IVFYYFVQHTRTGRQIYAIGSNPEAARISGINVSKLILTVYFLMGVLSGLAGVLWVSKFA 241

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
               D       + VI+  +LGG++            I +  L  G+       +     
Sbjct: 242 SAQSDTAT-GYEMNVIAAAVLGGVSIAGGS--GRISGIILGTLLLGILNNALPLVNVSPF 298

Query: 315 SFNMRHTTLMVIALFLVILMR 335
                   +++IA+ + +L+R
Sbjct: 299 WQQAIQGFIILIAVIVNVLVR 319


>gi|225627051|ref|ZP_03785089.1| ribose ABC transporter permease [Brucella ceti str. Cudo]
 gi|225617886|gb|EEH14930.1| ribose ABC transporter permease [Brucella ceti str. Cudo]
          Length = 342

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 93/319 (29%), Gaps = 17/319 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +       L ++  +L  +      S   + ++  +     + A G + V+ S G L L+
Sbjct: 29  RAVAPFVALLLLLLILGTIANPNFISIDNLLNVATRSAFIAIIALGATYVI-SSGGLDLS 87

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A  A   ++  +   ++  +L+ ++A++                     I   I 
Sbjct: 88  VGAMVAFVASIMILFMNSGMIADPVLMLIAAVMLALVVGAACGLLNGIITTVGGIEPFIA 147

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +     I                         T+R+      +  ++    + +   ++ 
Sbjct: 148 TLGTMGIYRGLTTW-----------LSQGGAITLRNPEIQSLYRPAYFGSVLGVPVPVIV 196

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +A     L RT        +  N+        ++   +  AF +    + +A   +
Sbjct: 197 IFVTAALAAFVLYRTRYGRHIIAVGSNEDVARYSGISVKKVRTIAFVIQGLCVAVAVLLY 256

Query: 250 AASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFY 304
                  S       E   + ++V+      GG+  +        IL  +  +    +F 
Sbjct: 257 VPRLGSTSATTGLMWELQAITAVVVGGTALRGGVGRIWGTICGAFILEIIGNIMLLSSFV 316

Query: 305 YFNSLLKFDCSFNMRHTTL 323
               L     +  +    +
Sbjct: 317 SEYLLGAIQGAIIIIAMLV 335


>gi|254505145|ref|ZP_05117296.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222441216|gb|EEE47895.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 338

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 80/281 (28%), Gaps = 18/281 (6%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           ++ FL   A  S+  + ++  +     + A G + V+ + G + L+     A  +   +I
Sbjct: 34  VIGFLLNPAFVSEGNLTNLLTRSAFIGIIAVGATFVI-TAGGIDLSVGSMAAAISGVMII 92

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           + +    ++   +P      G   ++                          + I    +
Sbjct: 93  VMNNAVETLGTGVPTVLFGCGLAILLGIGAGWINGALTTKGKIEAFIVTLGTMGIYRSLV 152

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
           T    G  ++      GT          +  SF+   I ++  +         +     R
Sbjct: 153 TYFADGGTLSLNFDIRGTYRP------VYYDSFLGLPIPVWVFIAVAICGWLLL----NR 202

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           TA       I  N+         +   K   + +    +  A   +       S      
Sbjct: 203 TAFGRYCTAIGSNEAVAKYSAINVDRVKTLTYIIQGLCVSFATIIYVPRLGSASA-STGV 261

Query: 264 SENIIVISIVILGGM------TSLSKIAKATAILIGVVELC 298
              +  I+ VI+GG         +        IL  +  + 
Sbjct: 262 LWELEAIAAVIIGGTVLKGGYGRIGGTILGALILTTIGNIL 302


>gi|171185018|ref|YP_001793937.1| inner-membrane translocator [Thermoproteus neutrophilus V24Sta]
 gi|170934230|gb|ACB39491.1| inner-membrane translocator [Thermoproteus neutrophilus V24Sta]
          Length = 291

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 97/306 (31%), Gaps = 19/306 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +  +  I   IY +   GLS++ G L + ++       IGAY      + +G       
Sbjct: 5   PFFITGLIIGSIYGLTTLGLSLIFGVLRVANVAHGSFIMIGAYMAFFAFTLWGWPPLATA 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V+A +    G ++ L ++K       + TL+        L +   +  G   +    RL
Sbjct: 65  AVAAAVGMGLGYLVYLVAIKPLKKAGELHTLVALFALGAALAEVARLLWGPDFVGYTWRL 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
             +                 +  EI            + ++ LWL+RT    A R +  +
Sbjct: 125 GSISLW-------------GLEVEIGKLMGAFVALATAVALDLWLQRTFFGRAVRAVVQD 171

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 +   +        A+      M G                    +I   + ++G
Sbjct: 172 PLGAQLVGVRVESVYAITAALGIGITTMGGVLLTLFIPVGINPYMGGPYTLIGFVVAVMG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+     A  +   +  +       Y+   L      +        +AL L++L R 
Sbjct: 232 GLGSVMGAYVAGLVFGVIESV------GYYLFSLAGFAEPSQMALFSAFVALLLLLLFRP 285

Query: 337 HSLLRL 342
             L RL
Sbjct: 286 TGLFRL 291


>gi|320179091|gb|EFW54050.1| Ribose ABC transport system, permease protein RbsC [Shigella boydii
           ATCC 9905]
          Length = 318

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/308 (11%), Positives = 91/308 (29%), Gaps = 23/308 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +         ++  + ++  Q  I ++ A G++ ++   G L L+     
Sbjct: 23  ILPILILIVAVFGFIAPNFFTESNLLNITRQASINIVLAAGMTFII-LTGGLDLSVGSIL 81

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A + +++      ++  +     +          L +      ++       +    
Sbjct: 82  GTTAVAAMVVSLSPEFAMLSIPAALMLGLLLGLFNGALVAFAGLPPFIVTLGTYTALRGA 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+                           +     F      Y   + ++++    + 
Sbjct: 142 AYLL---------------------ADGTTVINSNINFEWIGNNYLGPVPWLVVIALAVI 180

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 181 VLCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGIMSASRLY 240

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             + +       +  I+ VILGG+ +++       I+  +      M   YF  L+    
Sbjct: 241 SANGN-LGMGYELDAIAAVILGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQLVIKGA 299

Query: 315 SFNMRHTT 322
              +    
Sbjct: 300 VIIIAVLI 307


>gi|222099552|ref|YP_002534120.1| Sugar ABC transporter, permease protein [Thermotoga neapolitana DSM
           4359]
 gi|221571943|gb|ACM22755.1| Sugar ABC transporter, permease protein [Thermotoga neapolitana DSM
           4359]
          Length = 317

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 90/297 (30%), Gaps = 27/297 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL-LSLNCVIAY 74
            +  +   +   +      +   + ++G QI I+ + A G + V+ S G  + L+     
Sbjct: 16  LVALISLAVFTAVLNPRFLTTFNLQALGRQIAIFGLLAIGETFVIISGGGAIDLSPGSMV 75

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       L +     +WL + +    S   G   GL   K +                
Sbjct: 76  ALTGVMVAWLMTHGVP-VWLSLILILFFSIGVGAWHGLFVTKLKVP-------AFIITLG 127

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + I          G  +           +  +     P             +  +  ++
Sbjct: 128 TLTIARGMAAVITRGWPIIGLPSSFLKIGQGEVLKIPIP-------------VWILLVVA 174

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                +LR+T      R    N+ A       +   ++ AF VS    G+ G   AA   
Sbjct: 175 FVADFFLRKTVYGKHLRASGGNEIAARFSGVNVDRVRMIAFMVSGFLAGLVGIIVAARLS 234

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           +  P +    E   + S VI      GG  S+       +I+  +      +N   +
Sbjct: 235 QGQPGVGNMYELYAIASTVIGGTSLTGGEGSVLGAIIGASIISLLWNALVLLNVSTY 291


>gi|163732409|ref|ZP_02139855.1| branched-chain amino acid ABC transporter, permease component
           [Roseobacter litoralis Och 149]
 gi|161394707|gb|EDQ19030.1| branched-chain amino acid ABC transporter, permease component
           [Roseobacter litoralis Och 149]
          Length = 293

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 103/312 (33%), Gaps = 27/312 (8%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
             +      +        I+ + A GL+I+ G+ G++++       +GAY+   L +  G
Sbjct: 3   FSSIAFANSLILGLSIASIFFVAALGLTIIYGTAGVINMAHGEFIMLGAYTVYALQTFVG 62

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +  +L IP +  + GA G  +    +++  D      L    +   ++   + I      
Sbjct: 63  IPYFLCIPAAFFVVGAIGFAIEKSLIRYLYDRPLDTLLATWGVSLVLIQGTRLIFGSDPK 122

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                                   +  +    F  +++L    L+A++     RT     
Sbjct: 123 YVQIPSFLSTNV-----------EAGGLSLGAFRIFIILMALGLAAAVWFIFYRTDFGIK 171

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R +  N++   S            FA+ +   G+AGA F A    +      +     +
Sbjct: 172 VRAVTQNREMAASFGINAGQVYSFTFALGAGLAGVAGALFGALNIVLPTMGAGYVVEAFL 231

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
               ++ G  +L   A ++  +  +  +   +    F                L+ + + 
Sbjct: 232 ---TVVTGGGALMGSAISSFAIGELQSIFALITNSTFA-------------QFLIFVVII 275

Query: 330 LVILMRSHSLLR 341
           + +  R   L+ 
Sbjct: 276 VFLRFRPQGLIS 287


>gi|152967670|ref|YP_001363454.1| Monosaccharide-transporting ATPase [Kineococcus radiotolerans
           SRS30216]
 gi|151362187|gb|ABS05190.1| Monosaccharide-transporting ATPase [Kineococcus radiotolerans
           SRS30216]
          Length = 356

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/298 (11%), Positives = 86/298 (28%), Gaps = 29/298 (9%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG---AYSYVILGSRYG 89
             S   + ++     +  + + G++ V+ + G + L+      +    A +         
Sbjct: 69  FASVDNLLTILRFAAVIGVLSIGMTFVI-TGGGIDLSVGSVLGLASVWATTLATQTMAQD 127

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
               L++  + ++   CG++ G+     R      ATL M    + +             
Sbjct: 128 THWSLMVLTALLVGTVCGLVNGVLVAYGRVVAFI-ATLGMMVAARGLA------------ 174

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                    +      ++R   F  +F    + +  ++     ++ +  + L RT     
Sbjct: 175 -------EVIANRRTQIVRVQPFLDAFQGSVLGVPVLVWVFALVAVAGWVLLNRTTFGRR 227

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              +  N +A       +       +A+S    G+A     A     S       E   +
Sbjct: 228 TVAVGGNPEAARLAGIAVKRHTAYLYALSGLTAGIAAVMMLARTTAGSSTNGGLYELEAI 287

Query: 270 ISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            ++V+      GG  ++        I   +  +    N       +            
Sbjct: 288 AAVVVGGTLLAGGRGTVVGTVFGVLIFATLTNVFTQNNLSISAQSVAKGAIIVAAVML 345


>gi|319762060|ref|YP_004125997.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|330826122|ref|YP_004389425.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317116621|gb|ADU99109.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|329311494|gb|AEB85909.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 294

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 109/303 (35%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +    Y + + GL+++ G L +++      + +GA    +  + +G++ W+++  
Sbjct: 15  LLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGALITWMAMNYFGVNYWVMLIA 74

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  G+++    L++      +  L+++     ++        G +G         
Sbjct: 75  APLLVGVFGVVLERLLLRWIYKLDHLYGLLLTLGLTMVIEGVFRSIYGVSG--------- 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +        F+I   +  +V++    +  +    + +T +    R   +N +
Sbjct: 126 -LGYDTPELLEGATNLGFMILPNYRAWVVVASIVVCIATWYVIEKTKLGAYLRAGTENPR 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +A  +A    AG   A         +   +  I+V ++V++GGM
Sbjct: 185 LVEAFGVNVPVMITLTYAFGAALAAFAGVLAAPVYQV--TPLMGQNLIIVVFAVVVIGGM 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L  +                     +    +T++ + + +V+L+R   
Sbjct: 243 GSIMGSILTGLGLGVIEGFTKVF--------------YPEASSTVVFVIMAIVLLIRPAG 288

Query: 339 LLR 341
           L  
Sbjct: 289 LFG 291


>gi|254695878|ref|ZP_05157706.1| inner-membrane translocator:Sodium:dicarboxylate symporter
           [Brucella abortus bv. 3 str. Tulya]
 gi|261216301|ref|ZP_05930582.1| monosaccharide-transporting ATPase [Brucella abortus bv. 3 str.
           Tulya]
 gi|260917908|gb|EEX84769.1| monosaccharide-transporting ATPase [Brucella abortus bv. 3 str.
           Tulya]
          Length = 346

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/313 (10%), Positives = 84/313 (26%), Gaps = 10/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +    +         +      M   + I+ + A G+ ++V   G + L+     
Sbjct: 31  AFFALIAIIAVFSFLSPYYFTVDNFLIMSSHVAIFGLLAIGM-LLVILNGGIDLSVGSTL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       L     L  + +I    + +                  +    +    +  
Sbjct: 90  GLAGVVAGFLMQGVTLQEFGIILYFPVWAVVLITCALGAF----VGAVNGVLIAYLRVPA 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +             + + + L +     R  +    F          +   +L +  L+
Sbjct: 146 FVATLGVLYCARGVALLMTNGLTYNNLGGRPELGNTGFDWLGFNKLFGVPIGVLVLAILA 205

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L RTA          N++A       +   K+S + +S     +AG   ++   
Sbjct: 206 IICAIVLNRTAFGRWLYASGGNERAAELSGVPVKRVKVSVYVISGICAAIAGLVLSSQLT 265

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG  ++        ++  + +    +    +   
Sbjct: 266 SAGPTAGTTYELTAIAAVVIGGAALTGGRGTIQGTLLGAFVISFLSDGLVIIGVSSYWQT 325

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 326 VFTGAVIVLAVLL 338


>gi|134295667|ref|YP_001119402.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|134138824|gb|ABO54567.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia vietnamiensis G4]
          Length = 339

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 90/313 (28%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    V    L         +     ++  QI   V+ + G++ V+   G + L+     
Sbjct: 38  LAGALVAMVALFSALSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAG-IDLSVGSVL 96

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +   ++  +          ++   G + G  ++ +R       +L + E  +
Sbjct: 97  ALAASMVSVAALKWQWAPLPAALSGIAVATVTGSLTGAVTVGWRIPSFI-VSLGVLEGAR 155

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  +         G                      F        + +    L    + 
Sbjct: 156 GLAYQLTNSRTAYIGD--------------------AFDFLSNPIALGISPAFLIAVAVM 195

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    L RT        I  N++A           K+  FA+  A  G+A  F  +  +
Sbjct: 196 IAAQFVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKILVFALMGALAGLASLFQISRLE 255

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +      +        
Sbjct: 256 AADPNAGVGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGANEPTKR 315

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 316 IITGAVIVVAVVL 328


>gi|17988977|ref|NP_541610.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Brucella melitensis bv. 1 str. 16M]
 gi|225686428|ref|YP_002734400.1| hypothetical protein BMEA_B0622 [Brucella melitensis ATCC 23457]
 gi|256043535|ref|ZP_05446462.1| hypothetical protein Bmelb1R_03526 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256262432|ref|ZP_05464964.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2
           str. 63/9]
 gi|260564731|ref|ZP_05835216.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1
           str. 16M]
 gi|265989953|ref|ZP_06102510.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1]
 gi|17984813|gb|AAL53874.1| high-affinity branched-chain amino acid transport system permease
           protein livh [Brucella melitensis bv. 1 str. 16M]
 gi|225642533|gb|ACO02446.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
 gi|260152374|gb|EEW87467.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1
           str. 16M]
 gi|263000622|gb|EEZ13312.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1]
 gi|263092167|gb|EEZ16464.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2
           str. 63/9]
 gi|326410804|gb|ADZ67868.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Brucella melitensis M28]
 gi|326554096|gb|ADZ88735.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Brucella melitensis M5-90]
          Length = 289

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 85/303 (28%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y       + GL+    I ++
Sbjct: 9   VDALAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMIGGYFASYAAQQLGLNYGFAIIIA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + +    + +     +       +  ++M+      +I       G            L
Sbjct: 69  VVGTMIIAVPVERLLYRRIYGAPELTQVLMTIGVTFCIIGITNYIFGP----------TL 118

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T     +        F        + +     ++  +   + RTA     R   DN   
Sbjct: 119 KTIPLPEMLRGSVDLGFRAIAKHRIFAIGCGLAVAVGLWYAVERTAFGVKLRAAVDNANM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FA++       G   A          +     +  + +V +G   
Sbjct: 179 AAALGVRTEIVYAVSFALAIGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGRAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L  +      +                        +A+ +++ +    L
Sbjct: 237 SIPGALVACLLLGAIDTTGRYLA--------------PEYGEFFFYLAVIVIVTLFPRGL 282

Query: 340 LRL 342
              
Sbjct: 283 AGR 285


>gi|91974535|ref|YP_567194.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91680991|gb|ABE37293.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 291

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 95/305 (31%), Gaps = 28/305 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I  LI  + A G ++V+  +G+++    + +A+GAY  + L    G    LLI  
Sbjct: 11  LTNGVILGLILALVASGFTMVLSVMGVINFAHGLLFALGAYLALSLHKVVGYWPALLIAP 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +        +  D L +  L               I      +        
Sbjct: 71  LVVGALGVMLEQTFIRRLYGKDPLFVLLLTF------------GIAMAGEDVIQMIWGKL 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +     +        F++Y  +  ++         S+ L+L +T      R    + +
Sbjct: 119 AYSISPPDLAKGSIDLGFMVYSKYRLFMGGFALVAIFSVWLFLAKTPYGAMIRAGSHDSE 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +   +   F +++A   +AG   A                +    IV++GGM
Sbjct: 179 MVGILGKNLPRIRALVFGLAAAMAALAGIIAAPLWSV--RPQMGLDALLPAFLIVVIGGM 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S      A  ++         +                     +M +   +V++ R   
Sbjct: 237 GSFWGSVLAGLLVGVANSFAVMV--------------VPRFSDLMMYVLAVVVLIYRPRG 282

Query: 339 LLRLR 343
           LL  R
Sbjct: 283 LLGTR 287


>gi|119382932|ref|YP_913988.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119372699|gb|ABL68292.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 306

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 93/306 (30%), Gaps = 16/306 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     LI  + A GLS+V G +  ++L   + Y +GAY    +    G  I   +  
Sbjct: 10  LLNGIQLGLILFLLAAGLSLVFGIMDFINLAHGVFYMLGAYICATVAIASGSFILGFVVA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +         L    F         L+   +        K +               
Sbjct: 70  LPAVLVLGLATEWLIVRHFYKRDHLDQVLVTFGLVLCADTAVKYLWG-----------PQ 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +         +     +    +  +++     ++ ++   + RT +    R    N++
Sbjct: 119 GLSVPLPAWLGGQVALGGITLPAYRLFIVAVAAVVALALWQVIARTRVGMMVRASASNEE 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L           FA+ +   G+ G   A                I+ + ++I+GG+
Sbjct: 179 MARALGIETRMIFALVFAIGAVLAGIGGIMVAPITGA--SIGMGNQIVILALVVIIIGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMR 335
            S+     A   +  +  L          ++     +        + L+ + + LV++ R
Sbjct: 237 GSIFGAFVAAIGVGLIDTLGRAYLPSILGAVFSPSVASSAGPALASILIYLTMTLVLVFR 296

Query: 336 SHSLLR 341
              L  
Sbjct: 297 PSGLFP 302


>gi|271969454|ref|YP_003343650.1| ribose ABC transporter permease [Streptosporangium roseum DSM
           43021]
 gi|270512629|gb|ACZ90907.1| ribose ABC transporter (permease) [Streptosporangium roseum DSM
           43021]
          Length = 374

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 80/302 (26%), Gaps = 25/302 (8%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L        S   + S+        +   G + V+   G + L+     A+ A  +    
Sbjct: 84  LVTVPDTFASTSNLVSILALAATIGVITVGATFVI-IGGGIDLSVGAVMAL-ASVWATTL 141

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           +       ++I  + ++    G++ G      R      ATL M    + +  +      
Sbjct: 142 ATQSYGPLVMIVCAVLVGTGAGLVNGWLIAYGRLVPFI-ATLAMLVAARGLAQRMSD--- 197

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                           T                  + +  ++     +  +  + L RT 
Sbjct: 198 --------------RKTQLVQQGNEMIVELSTTRVLGVPVLVYVFAVVVVAGWVLLNRTT 243

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
                  +  N +A       +    +  +A+S    G+A     A     S       E
Sbjct: 244 FGRRTFAVGGNPEAARLAGIDVRRHTVWLYALSGLCCGIAAVLIMARTTTGSSTHGDLYE 303

Query: 266 NIIVISIVILGGMT-----SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              + +++I G +      S+        I   +  L         + L+       +  
Sbjct: 304 LDAIAAVIIGGTLLTGGRGSIVGSILGLLIFTVITNLFILNGLNTSDQLIAKGLIIVVAV 363

Query: 321 TT 322
             
Sbjct: 364 LL 365


>gi|307298158|ref|ZP_07577962.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916244|gb|EFN46627.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 321

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/321 (12%), Positives = 101/321 (31%), Gaps = 27/321 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LRL K +  L L+ V   ++  L      + + + ++  Q+ I ++ A G++ V+   G 
Sbjct: 18  LRLLKGELGLILILVALMVVFSLMSPYFFTSRNLLNITRQVSITLIVAIGMTFVI-LTGE 76

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+   + A+   +   + +  G           +I+G    +    +      Y  + 
Sbjct: 77  IDLSVGSSAALVGVATAAVLNATGSIFL------GLIAGLILGVGIGFANGVLTVYGRVQ 130

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           + I++     I      +  G   I                     F      Y   +  
Sbjct: 131 SFIVTLAMMGIARGAALVWTGGKPISRLP---------------VDFAIMGAGYLGPVPV 175

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
             +    +       L RT      ++I  N++A       +   ++ AF +S     + 
Sbjct: 176 STIIAAGVFILAFFVLNRTKHGVYVKSIGANREAARLSAIPVRKYRVLAFVISGLMSALG 235

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCG 300
           G    +      P   +  E  ++ +++     + GG+ ++        ++  +      
Sbjct: 236 GILITSKLLSAQPTAAEGLEMNVIAAVILGGASLSGGVGTVLGTLLGAMVIGVIDNGMNL 295

Query: 301 MNFYYFNSLLKFDCSFNMRHT 321
           +    F   +       +   
Sbjct: 296 VGVSSFFQQIVKGVIILVAVL 316


>gi|168333745|ref|ZP_02691995.1| ribose ABC transporter (permease) [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 315

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 91/311 (29%), Gaps = 20/311 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+   +L +     +S   I S+  Q     + A+G+++V+   G + L+     A
Sbjct: 15  LIALVLLVTILGVISPDFRSLDNIISVLRQSANNGLIAFGMTLVI-LTGGIDLSVGSILA 73

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L      +  + + V+ +     G I GL   + R                 
Sbjct: 74  LSVTICAQLLVMGITAP-IALLVALLAGTLLGAINGLMVTRGRLQPFIAT---------- 122

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            LI     +     +     +  L                  I  I M  ++L   F   
Sbjct: 123 -LITMTAYSGLTFILSDGKPISNLTEGDMFSTHVLSMIGRGSILSIPMPIIILVASF--I 179

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L  T        +  N KA       I   KL+ +A+S  F  ++G    +    
Sbjct: 180 VLYFLLHNTVFGRKVYAVGSNAKAAAIAGVNINKTKLTVYAMSGFFAALSGLILLSRLGS 239

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P +    E   + ++      + GG   +        I+  +      +N   +   +
Sbjct: 240 AQPTLGSGYELDAIAAVALGGTSLSGGRGKIFGTLIGVLIIAILNNGLNIINVSSYYQDV 299

Query: 311 KFDCSFNMRHT 321
                  +   
Sbjct: 300 IKGIVILIAVL 310


>gi|167583737|ref|ZP_02376125.1| Monosaccharide-transporting ATPase [Burkholderia ubonensis Bu]
          Length = 345

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 91/311 (29%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + ++  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 46  VLLLLCVGFGFLTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 104

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S      WL +P +  +    G + G      R     +    ++ +     
Sbjct: 105 A-VAALLASNIPNWGWLGVPAALAVGLVFGAVNGGLIALLRLPPFIVTLGALTAVRGVAR 163

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    +G           F        + + ++++    +  + 
Sbjct: 164 L--------------------MGNDTTIFNPQLPFAFIGNGSILGVPWLVVIAGAVIVAS 203

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   +L  +A S    G+     AA     +
Sbjct: 204 WFILRRTVLGMRIYSVGGNPEAARLSGINVRAIQLFVYAASGLLAGLGAVMSAARLYAAN 263

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 264 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLTNGLVLLGVSDIWQYII 323

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 324 KGLVIIGAVAL 334


>gi|220920271|ref|YP_002495572.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219944877|gb|ACL55269.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 317

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 47/321 (14%), Positives = 114/321 (35%), Gaps = 28/321 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +  ++  + A GL+++   +G+L+      Y +GA+    +        W+ + V+
Sbjct: 10  LNGVLYGMLLFLMASGLTLIFSMMGVLNFAHASFYMLGAFFGYQISR--FAGFWVGLVVA 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            ++ G  G ++    L+    +  +  L+ +     ++ +   +  G            L
Sbjct: 68  PVLVGGLGALVERYGLRNVHRHGHVPELLFTFGLAYVIEEVVQMIWG---------KLPL 118

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              V +L+ F  F      Y  +  ++LL    + A ++L L RT +    +    +   
Sbjct: 119 DYRVPALLDFPAFTIFDTNYPAYKLFMLLVSVVIFAGLLLVLTRTRVGLIIQAALTHPNM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L   +    +  F + +    +AG     +   ++          I+  +V++GG+ 
Sbjct: 179 VAMLGHDVAKVFMLVFGIGTGLAAVAGVIAGPAL--VTQSNMAGLLGPILFVVVVVGGLG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM--------------- 324
           SL+    A+ ++  +      ++    +    F  +       L                
Sbjct: 237 SLTGAFVASLLIGLIQTFAISLDVSIASLFEAFGIAAAPSGGVLGDLWTVTIAQIGPVIP 296

Query: 325 VIALFLVILMRSHSLLRLRTP 345
            + L +V++ R   LL  R  
Sbjct: 297 YLLLVIVLIFRPTGLLGSREA 317


>gi|153814558|ref|ZP_01967226.1| hypothetical protein RUMTOR_00772 [Ruminococcus torques ATCC 27756]
 gi|317501276|ref|ZP_07959480.1| hypothetical protein HMPREF1026_01423 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331089298|ref|ZP_08338199.1| hypothetical protein HMPREF1025_01782 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145848052|gb|EDK24970.1| hypothetical protein RUMTOR_00772 [Ruminococcus torques ATCC 27756]
 gi|316897343|gb|EFV19410.1| hypothetical protein HMPREF1026_01423 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330405479|gb|EGG85011.1| hypothetical protein HMPREF1025_01782 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 319

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 84/297 (28%), Gaps = 25/297 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            +    + + ++  Q  I  +   G++ V+   G + L+     A+       +      
Sbjct: 34  PSFFRGQNLLNIIKQASITGVIGVGMTFVL-ITGGIDLSVGSVMALSGTMAASVAVAEKN 92

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
               L+ +  +  GA   ++    + + G    I TL M  I + I              
Sbjct: 93  MPIALVILVGVGLGALCGLINGIGVSYIGFPPFIMTLGMMTIARGI-------------- 138

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                                F        + +  +++ +     +  + L +T +    
Sbjct: 139 -----PLVFTNGTPIFGLSEEFNMIANSRVLGVPSLVIFLVITVLAGHIILSKTVLGRRI 193

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N+ A      +    KL  +       G+AG    +     +  + +  E   + 
Sbjct: 194 YAVGGNEDAARLSGVSTAKVKLFVYVFCGILSGIAGILICSRITSGNGTVAEGYEMNAIS 253

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + VI      GG  ++  +     IL  +      M    F   +       +    
Sbjct: 254 AAVIGGVSMTGGSGNVLGMVVGAMILTIIQNSFDIMGVNSFYQNIIKGIIILLAVFL 310


>gi|89068974|ref|ZP_01156356.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
 gi|89045555|gb|EAR51619.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
          Length = 343

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/344 (13%), Positives = 99/344 (28%), Gaps = 52/344 (15%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS------------------ 80
             +   +   Y + A GL+++ G+LG+++      + IGA+                   
Sbjct: 8   FLNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFCAVTMSRLLSLSHQVVDET 67

Query: 81  ---------------------YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
                                          ++ + I ++  +    G++M    +K   
Sbjct: 68  RTDFLGNPMKVDVPYVNDWFGEATGALIIDWAVPISILLAIPVMLLVGIVMERGLIKHFY 127

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
                  ++++     +L +      G   I       F G+          F    + Y
Sbjct: 128 KRPHADQILVTFGLAIVLQEIIKQVYGANPIPTPAPEAFRGS--LDFGVMLGFDPYTITY 185

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
             +          +  ++  +L+ T      R    +++    L   I       F +++
Sbjct: 186 PYWRLVYFAFSVIIIGAVFAFLQFTTFGMVVRAGMADRETVGLLGIDIDRRFTLMFGLAA 245

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
              G+AG  +             F     V+ +V    M SL     A  +L  +     
Sbjct: 246 IVAGLAGVMYTPINSPNYHMGMDFLVLSFVVVVVGG--MGSLPGAVAAGFLLGILQS--- 300

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                 F S+             ++ +   L++L R   LL  +
Sbjct: 301 ------FASMNWIKDIIPGIDQIIIYLVAILILLTRPRGLLGRK 338


>gi|254460857|ref|ZP_05074273.1| hypothetical protein RB2083_1448 [Rhodobacterales bacterium
           HTCC2083]
 gi|206677446|gb|EDZ41933.1| hypothetical protein RB2083_1448 [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 360

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 93/298 (31%), Gaps = 14/298 (4%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
             +  ++  +  + +Q+ I  + A G++ V+ + G + L+     A  A   +  G    
Sbjct: 63  FDSIFNEARLKIIILQVAIIGIIALGVTQVIITAG-IDLSSGPLVAATAMIAMSFGQTE- 120

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
               L+   +   +      M LP +      LA    I +     I     P      G
Sbjct: 121 ----LVNGFANPKALFGPWAMDLPVIVPVVVGLAFGACIGAINGTFIAYMRIPPFIATLG 176

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +++  R   L  +  + I F      F+   +      L +        + +R T     
Sbjct: 177 MFLICRGIALWWSGGNPISFPTESFKFIGSGMMPVVWFLSLA---VVFHVIMRYTVYGKH 233

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              I  N++A       +   K++ + ++S     AG   AA  +     M +F E   +
Sbjct: 234 TYAIGSNEEAARMSGINVKRHKVTVYVIASMLAAFAGVVLAAKSETAQAGMGEFYELFAI 293

Query: 270 ISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
              VI      GG  S+        +L  +      +       L+            
Sbjct: 294 AMAVIGGISLQGGRGSIIGTVLGAMVLGVIRSGFTYIKLDGSYQLMAMGSIIIAAILF 351


>gi|123442969|ref|YP_001006944.1| putative branched-chain amino acid transport system, permease
           component [Yersinia enterocolitica subsp. enterocolitica
           8081]
 gi|332161154|ref|YP_004297731.1| putative branched-chain amino acid transport system, permease
           component [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|122089930|emb|CAL12787.1| putative branched-chain amino acid transport system, permease
           component [Yersinia enterocolitica subsp. enterocolitica
           8081]
 gi|318605043|emb|CBY26541.1| ribose/xylose/arabinose/galactoside ABC-type transport systems,
           permease component 2 [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325665384|gb|ADZ42028.1| putative branched-chain amino acid transport system, permease
           component [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|330860017|emb|CBX70344.1| hypothetical protein YEW_LE47430 [Yersinia enterocolitica W22703]
          Length = 340

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 107/317 (33%), Gaps = 18/317 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L +++ +L    ++    L        +   I  +     +  + A GL IV+   G + 
Sbjct: 23  LKRHEVMLAFTILIISTYLAFTSPDFLTLANIYDLINNYAMLTILACGLFIVL-ISGGID 81

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++      I  Y  V L  ++G +  +   ++  I    G+I  L   + R   + I   
Sbjct: 82  ISFPAMTIISQYVMVTLIVKFGGNFPVAFALAGGIGLLLGLINALLVNRLRVPSIIITIS 141

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++  +  +L   + +       +          T                Y+  +   +
Sbjct: 142 TLNIFYGLLLYLSRGVWLYTYPEWFEHGPMLFSFTAAD------------GYDYGLSLPI 189

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +        L + RT+I      +  NQ+A   +  +I+  +L  +       G+AG 
Sbjct: 190 LTLLATIIVTALLMTRTSIGRQIYALGGNQEAASRMGFSILKLQLFVYGYMGFLSGIAGV 249

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
             + +   ++PD     E  ++ ++V     I+GG  +L+       +L  +      + 
Sbjct: 250 VQSYTVLTVAPDSLLGYELTVLAAVVLGGTSIVGGRGTLTGTLLGVILLAILQNGLNLLG 309

Query: 303 FYYFNSLLKFDCSFNMR 319
              +   +       + 
Sbjct: 310 ISSYWHTVVIGLVIVIS 326


>gi|150376360|ref|YP_001312956.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
 gi|150030907|gb|ABR63023.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
          Length = 287

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 88/303 (29%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y         G+   L + ++
Sbjct: 9   VDALAYGMVLFVISIGLSVTLGLMRVVNLAHGAFAMIGGYIASYAARDLGVGYGLAVLIA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
              +    + +     +       +  ++M+      +I       G     +       
Sbjct: 69  VFGTIVIAIPIERLLYRRIYGRPELTQVLMTIGITFCIIGIANYVFGPTLKTIPLPPSLQ 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G               F    +   + ++    ++A++   + RTA     R   D+   
Sbjct: 129 G----------SADLGFRSIAVHRIFAIVCGLCVAAALWYAIERTAFGVRLRAAVDDAAM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FAV+       G   A          +     +  + +V +GG  
Sbjct: 179 AAALGVRTEVIYAVSFAVAVGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L G+      +   +                    +A+  ++ +    L
Sbjct: 237 SIPGALAACLLLGGIDTTGRYLMPEFGE--------------FFFYLAVIAIVCVFPRGL 282

Query: 340 LRL 342
              
Sbjct: 283 AGR 285


>gi|83319467|ref|YP_424035.1| ABC transporter, permease protein [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|83283353|gb|ABC01285.1| ABC transporter, permease protein [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 852

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 84/312 (26%), Gaps = 9/312 (2%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
             L  G    + +       + +Y++    +++     G+ ++              IL 
Sbjct: 58  FALLFGINFDKNFYQISLNWMAVYIVAGLSMAVAFK-SGVFNIGAPGQILTATSVSTILF 116

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
                S    I  S +I      I+    L      L  A   + E+   IL+ W     
Sbjct: 117 FYIKGSKAATIDGSMIILMLITCIVSASFLALIAGAL-KALFNIHEVVSTILLNWSVFYI 175

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
            K             +     I   +         + +    L        + +   +T 
Sbjct: 176 FKWFFNRFKDFSGGLSFTSKNIPSDQLVIGSNTVIVPL----LIALICVILVWILFSKTT 231

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +    + +  +      +   +    +S+ A+S A  G+AG     +    +        
Sbjct: 232 LGFKLKAVGSSITGSKYIGINVKTQIISSSALSGAIAGIAGFILIFTVTPNNFFASNSLP 291

Query: 266 NIIVISIVI-LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
            +   +I + L    +   I     +   +      ++  Y  S         +      
Sbjct: 292 TVGFDAIAVSLVAFNNPIGIIPIGWLWAVIKTGGGPVSSLYGISTQISGLISGV--LIYF 349

Query: 325 VIALFLVILMRS 336
              + + I+ + 
Sbjct: 350 TAIVSIFIVFKP 361


>gi|268593531|ref|ZP_06127752.1| ribose ABC transporter, permease protein [Providencia rettgeri DSM
           1131]
 gi|291310955|gb|EFE51408.1| ribose ABC transporter, permease protein [Providencia rettgeri DSM
           1131]
          Length = 320

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 85/312 (27%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +        + +                + F  
Sbjct: 82  LTGAVAASMVGAEVNALVAVAGALALGAAIGACTGVIVAK------------GKVQAFIA 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +    +    L  +F     F I       +++      A
Sbjct: 130 TLVMMLLLRGVTRVYTDGSPINTGFSDNADLFGWFGIGRPFGIPTPVWLMIIVF-----A 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L  T +      +  N+ A       +   K+  +A+      +A     A    
Sbjct: 185 AAWYMLHHTRLGRYIYALGGNEAATRLSGINVDRIKIVVYALCGLLAALASVIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +       ++
Sbjct: 245 AQPMAGNGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGISSNYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|293603385|ref|ZP_06685813.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292818295|gb|EFF77348.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 300

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 77/248 (31%), Gaps = 4/248 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+I+ G L +++      + + A+   I  ++    +   + +
Sbjct: 13  LLVGLINGCFYAILSMGLAIIFGLLNIVNFTHGAQFMMAAFLAWIGFTQLPQLLGPGVQI 72

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   +     ++           L     +        L+    I     G +       
Sbjct: 73  NFWAALILAPLLVGAVGVVIEKTL--LKRLYHLDHLYGLLLTFGIALMMEGGFRYFYGIS 130

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    F   F+    +  +V++    L  +      RT +    R   +N K
Sbjct: 131 GVGYEPPEILQGGFDLGFMFLPAYRGFVVVASLTLCIATWYLFERTRLGAMLRAGTENPK 190

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +    A  G+AG   A         +   +   IV ++V++GG+
Sbjct: 191 LLQAFGVNVPVMITLTYGFGVALAGVAGVLAAPVMQI--NPLMGSNLLNIVFAVVVIGGL 248

Query: 279 TSLSKIAK 286
            S+     
Sbjct: 249 GSIMGAIV 256


>gi|163859217|ref|YP_001633515.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella petrii DSM 12804]
 gi|163262945|emb|CAP45248.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella petrii]
          Length = 290

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 100/306 (32%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +         Y M A  +++V   + +++      + +GA+   +     GLS+WL  P+
Sbjct: 8   LIYGLSVGSTYAMIALAITLVFRGMDIINFAQGEIFMVGAFLGYVFHVDMGLSMWLAFPL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   +   G I+    ++   +   ++  +M+     +L     +  G +          
Sbjct: 68  AIASALLFGSILERVFMRRLENANQLSLFMMTVALFILLRSAAQLVFGSSAYRFPP---- 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +         V        V+     + A + +   RT +  + R +  ++ 
Sbjct: 124 --------LSAHTAKLGAVQISDQYLIVIGMTLLIMALLYVLFTRTPLGLSVRAVAQDKT 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +        A+ SA    AG  +A     +          +   +  +LGG+
Sbjct: 176 TARMMGINVSRINNFTVALCSALGAAAGIVYAP--IAVLSFDMGNLIMLKGFTAALLGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             LS       +L  + +    +    +  L+ F               L L+IL++ + 
Sbjct: 234 GLLSGAVVGGILLGVIEQFGTLLINSAYKDLVSFS-------------ILLLIILVKPNG 280

Query: 339 LLRLRT 344
           +L  + 
Sbjct: 281 ILGKKQ 286


>gi|37528962|gb|AAQ92409.1| RhaP [Rhizobium leguminosarum bv. trifolii]
          Length = 333

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/317 (13%), Positives = 96/317 (30%), Gaps = 23/317 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K + +L L+ VV  ++         +   +  +     I ++ A    + V     + 
Sbjct: 5   IRKRETLLFLIIVVMIVVFSTRAADFATPGNLAGIFNDTSILIILALAQ-MTVILTKSID 63

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A    +  ++ + +     +++ + A++ GAC   +    +        + TL
Sbjct: 64  LSVAANLAFTGMAIAMMNAAHPDLPLVVLILMAVVIGACLGAINGFLVWALEIPPIVVTL 123

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I++ +                       G  V +      F S      + +  + 
Sbjct: 124 GTLTIYRGMAFVLSG-----------------GAWVNAHQMTPIFLSVPRTPVLGLPVLS 166

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                +   + + LR T    +      N  A         + K  AF +S A  G+A  
Sbjct: 167 WVGIIIVILMYVLLRYTQFGRSAYATGGNPTAAVYAGIDTGWTKFLAFVLSGALAGLASY 226

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
            + +       D+    E   V + V     I GG+ S++        L  +      + 
Sbjct: 227 LWVSRYAVAYVDIANGFELDSVAACVIGGISIAGGVGSVAGTVLGALFLGVIKNALPVIG 286

Query: 303 FYYFNSLLKFDCSFNMR 319
              F  +        + 
Sbjct: 287 ISPFTQMAISGTVIILA 303


>gi|29828369|ref|NP_823003.1| ABC transporter integral membrane protein [Streptomyces avermitilis
           MA-4680]
 gi|29605472|dbj|BAC69538.1| putative simple sugar ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
          Length = 339

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/295 (12%), Positives = 90/295 (30%), Gaps = 25/295 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +L +LA +  +            + +  +  Q  +  +   G++ V+ + G + L+
Sbjct: 34  RTLSLLGVLAALVVIGGITKPDEFLDTRNLQLVLTQASVIGVVTVGMTFVI-TSGGIDLS 92

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+ A  +    +        ++  + ++   CG++ GL            ATL M
Sbjct: 93  VGAIVAL-ASVWATTVATQEYGFAGILFTAMIVGVGCGLVNGLLIAYGGLVPFI-ATLAM 150

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
               + + ++                    G T    +           Y + +  ++L 
Sbjct: 151 LASARGLALQITD-----------------GRTQIVTVDTVLKLGERDSYLLGIPPLVLV 193

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              ++    L L RT        +  N +A       +   +L  + +S    G+A    
Sbjct: 194 FAVVTVIGWLILNRTTFGRRTVAVGGNAEAARLAGIDVRRQRLYLYLLSGLCCGIAAFLL 253

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
                          E   + + +I      GG  +++       I   + ++  
Sbjct: 254 IILSGSGQNTNGNLYELDAIAAAIIGGTLLSGGRGTITGSVLGVLIFTTITDIFA 308


>gi|116669396|ref|YP_830329.1| inner-membrane translocator [Arthrobacter sp. FB24]
 gi|116609505|gb|ABK02229.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Arthrobacter sp. FB24]
          Length = 349

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/330 (12%), Positives = 102/330 (30%), Gaps = 13/330 (3%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           S F   L + +    + A+V  +   L          + ++        + A G+S+++ 
Sbjct: 21  SPFQKLLGRPEVGALVGAIVLFIFFALVSPTFTQPNALATILYGSSTIGIMAVGVSLLM- 79

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G   L+  +A    A +  +    +  ++W+ + ++ ++S   G I G   +K +   
Sbjct: 80  IGGEFDLSTGVAVISSALTASLFSWYFSTNVWVGVGLALLVSLGIGFINGWILMKTKLPS 139

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
               TL    +   + +    +  G         +    +               V   +
Sbjct: 140 FI-VTLATFLMLTGLNLGLTRLIGGSVSSPSISNMDGFASARAVFASSVTIGGVDVKNTV 198

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
           F+++ L+ +            RT + N    +  +  A  ++   +   K+  F      
Sbjct: 199 FIWFALVAVATWVL------MRTRVGNWIFAVGGDANAARAVGVPVKATKIGLFMAVGFC 252

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
             + G     + D +       +E + +I+ VI      GG  S    A    I     +
Sbjct: 253 GWILGMHNLFAFDTVQSGEGVGNEFLYIIAAVIGGCLLTGGYGSAIGGAIGAFIFGMANK 312

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
                 +              +     +++
Sbjct: 313 GIVYAQWNPDWFKFFLGLMLLLATIVNLIV 342


>gi|304392021|ref|ZP_07373963.1| inner-membrane translocator [Ahrensia sp. R2A130]
 gi|303296250|gb|EFL90608.1| inner-membrane translocator [Ahrensia sp. R2A130]
          Length = 460

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 86/286 (30%), Gaps = 12/286 (4%)

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
               +A GA   +   +    S +L I    +      M+     L      +      +
Sbjct: 168 VGGVFAAGAAWLIGKVALGLRSDYLAIATLGISEILIAMMKNEDWLTRGVKNVTGLDRPV 227

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +  ++  L               +      G    +L++      S +  ++    + L 
Sbjct: 228 TVPYEVDLQVSDTFIGWVEWWNASALSAVSGDERIALLKNLVIEQSSIFVKLSYMSLFLA 287

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  +  ++ ++   +      R IRDN+ +  ++   +    L  F + SA +G+AGA  
Sbjct: 288 VLLVILALCVFALASPWGRMVRAIRDNEVSAAAMGKNVKRRHLQIFVLGSAVVGIAGAML 347

Query: 250 AASRDRISPDMFKFS-ENIIVISIVILGGMTSLSKIAKATAILIGVV-----------EL 297
                   P  ++      ++  +VI+GG  +         ++  +            E 
Sbjct: 348 TTLDGAFFPTSYQPLRYTFLIWVMVIVGGSGNNLGSVLGAFLIWFIWIQAEYVGPLAMEW 407

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                            S       +M I +  V+      LL  R
Sbjct: 408 AVSSLDPASPIRAHLLDSAQHMRLFIMGIVMLTVMRFSPGGLLPER 453



 Score = 39.5 bits (90), Expect = 0.90,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 33/75 (44%)

Query: 21 VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
              +L + +G T+S     +M    +I  + A G++I  G  GL ++  +   A+G  +
Sbjct: 12 AIIAILLVLVGITQSWNVALAMANLGIISAIMALGVNIQWGYAGLFNVGIMGFAALGGMA 71

Query: 81 YVILGSRYGLSIWLL 95
           V++      + W  
Sbjct: 72 AVLVSRDPVATAWAA 86


>gi|255524006|ref|ZP_05390968.1| Monosaccharide-transporting ATPase [Clostridium carboxidivorans P7]
 gi|296186864|ref|ZP_06855265.1| ribose ABC transporter permease protein [Clostridium
           carboxidivorans P7]
 gi|255512293|gb|EET88571.1| Monosaccharide-transporting ATPase [Clostridium carboxidivorans P7]
 gi|296048578|gb|EFG88011.1| ribose ABC transporter permease protein [Clostridium
           carboxidivorans P7]
          Length = 309

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 97/313 (30%), Gaps = 29/313 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++  +++ L      +   I ++  Q+ +  + A G+  V+   G + L+     A
Sbjct: 15  LIGLLILCIVISLVTPRFLTVPNILNVFTQVSVNAIIAVGMCFVI-LTGGIDLSVGSTLA 73

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I   +     ++  ++I L++ ++ +I G  G++ G+   K +     +    M+     
Sbjct: 74  IAG-AIAASLAQKNVNIVLILILTVIIGGLIGLVNGIIVAKGKIQAFIVTLATMTVFRGV 132

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             +          G                      F        I +   ++ +  ++ 
Sbjct: 133 TYVYTNGTPISGLGTN--------------------FTFIGNGTIIGIPLPVIIIAIVAL 172

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L +T        +  N+ +           K   + +S A   ++     +    
Sbjct: 173 IAWYVLTQTRYGRYVYAVGGNEDSSRLSGINTDKIKALVYVLSGAAAALSAIVVTSRIGS 232

Query: 256 ISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            SP+       +  I+ V+LGG        SL+       I+  +      MN   F   
Sbjct: 233 ASPNA-GSGFELDAIAAVVLGGTSLSGGEGSLTGTIIGAMIIGVLNNGLNLMNVSPFYQS 291

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 292 IVKGLVILLAVML 304


>gi|110003957|emb|CAK98297.1| hypothetical abc transporter permease component transmembrane
           protein [Spiroplasma citri]
          Length = 719

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/351 (11%), Positives = 113/351 (32%), Gaps = 26/351 (7%)

Query: 4   FSLRLNKYDK----ILCLLAVVYPLLLFLFLGATKSQKYIDSM----------GIQILIY 49
           F  ++N +      I+  + + + ++            Y+  +               IY
Sbjct: 25  FKTKMNYFKASICAIIAGVLLSFIIIGANASDPLLFFSYVFRLAFHPLLKDSTLTYWAIY 84

Query: 50  VMFAWGLSIVVGS-LGLLSLNCVIAYAI-GAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           ++   GL++ VG   GL ++       + G+ + V+      +S    +  +  IS   G
Sbjct: 85  IVA--GLAVAVGFKAGLFNIGVPGQMLLAGSMTIVLGLKNPAISQGTGVIGALFISIIAG 142

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
             +   +   +      A   + E+   I++ W      K          +      ++ 
Sbjct: 143 AALATIAGALK------AYFNIHEVVSTIMLNWIVWYVMKWMFMNPAHGMWNSNQNSTID 196

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSA-SIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                P+  ++    ++ +   +  L    I+  +  T +    + +  ++ A     T 
Sbjct: 197 IVTTAPNFNLVLNGQLWIIPFIIAMLLLGIIVFIMNYTVLGFRIKAVGKSKNASLYAGTN 256

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +    + + A+S A  G+ G  +  ++  +          +   +I +     +      
Sbjct: 257 VKAYTIVSMALSGALAGVLGMLYYMTQSTVLQFTTDALPVVGFDAIAVALVAFTNGFAIL 316

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL-FLVILMRS 336
             A+L G+++          +  +       +    + + A+  L I  + 
Sbjct: 317 PIALLWGIIKTAALQATQLPDFQMSKQMGQLIFGIIIYMTAISTLFIYFKP 367


>gi|328545566|ref|YP_004305675.1| branched-chain amino acid ABC transporter permease [polymorphum
           gilvum SL003B-26A1]
 gi|326415306|gb|ADZ72369.1| Branched-chain amino acid ABC transporter, permease protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 288

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 82/304 (26%), Gaps = 22/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +    Y + A GL++  G   +++L        GA++     +   +S  L + +
Sbjct: 4   IITGLLLGGTYALIAMGLNLQYGMARIMNLANGEMLVAGAFAAFWFWTGGQISPLLTVFL 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A  +     ++ +        +L           Q  +                    F
Sbjct: 64  VAPAAFLLNWLVYVV-------FLRPLVRRARSRGQLEVDSILTTFGLSFVAVGLMLALF 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                  Y             +  ++ LWL R+      R I     
Sbjct: 117 GGDYFSYSYLSVPVHIFSSTYGANRIAAFAAAVVICGALWLWLNRSRAGMTIRAIAVAPD 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           +   +   ++     AFA+  A     GA  +                +  + IVI+GG+
Sbjct: 177 SARLVGIDVMRMAAFAFALGGAVTATGGALISTFLTL--DASTGGLFTLKALVIVIMGGV 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +     A  +L  +      +                        +   +V+L+R   
Sbjct: 235 GDVRGTVVAALLLGLLETFVATVIDPGLTLAAA-------------YLVFIIVLLVRPQG 281

Query: 339 LLRL 342
           L   
Sbjct: 282 LFGR 285


>gi|300950667|ref|ZP_07164561.1| ribose ABC transporter permease protein [Escherichia coli MS 116-1]
 gi|300958761|ref|ZP_07170876.1| ribose ABC transporter permease protein [Escherichia coli MS 175-1]
 gi|300314598|gb|EFJ64382.1| ribose ABC transporter permease protein [Escherichia coli MS 175-1]
 gi|300450037|gb|EFK13657.1| ribose ABC transporter permease protein [Escherichia coli MS 116-1]
          Length = 321

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 90/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +   + +                   Q 
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        +     ++G+ FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A       +   K+  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGINVNKIKIIIYSLCGLLASLAGIIEVARLSS 244

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 VKAVVILLAVLV 316


>gi|326775427|ref|ZP_08234692.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|326655760|gb|EGE40606.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 350

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/318 (12%), Positives = 90/318 (28%), Gaps = 25/318 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +L +LA +  +       A      +  +  Q  +  +   G++ V+   G + L+
Sbjct: 43  RILSLLGVLAALILVGGITEPDAFLDTGNLQLILTQASVIGVVTVGMTFVI-ISGGIDLS 101

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+   S            +  I  +A+I G    ++    + + G    IATL M
Sbjct: 102 VGAMVALA--SVWATTLATQEYGFAGIAFTAVIVGLAAGLVNGVLIAYGGMVPFIATLAM 159

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
               + + ++                    G T    +           Y + +  +++ 
Sbjct: 160 LASARGLALQITD-----------------GKTQIVTVDSVLDLGLPDSYILGIPPLVIM 202

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              ++A   L L RT        +  N +A       +   +L  + +S    G+A    
Sbjct: 203 FAVVTAVGWLILNRTTFGRRTVAVGGNAEAARLAGIDVRRQRLYLYLLSGLCCGIAAFML 262

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFY 304
                          E   + + +I      GG  ++        I   +  +    N  
Sbjct: 263 IVLAGSGQNTNGNLYELDAIAAAIIGGTLLSGGRGTIVGSVLGVLIFTTITNIFALNNLQ 322

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +            
Sbjct: 323 SDVQQIAKGAIIVAAVLV 340


>gi|256111435|ref|ZP_05452455.1| hypothetical protein Bmelb3E_02310 [Brucella melitensis bv. 3 str.
           Ether]
 gi|265992937|ref|ZP_06105494.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether]
 gi|262763807|gb|EEZ09839.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether]
          Length = 289

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 85/303 (28%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y       + GL+    I ++
Sbjct: 9   VDALAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMIGGYFASYAAQQLGLNYGFAIIIA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + +    + +     +       +  ++M+      +I       G            L
Sbjct: 69  VVGTMIIAVPVERLLYRRIYGAPELTQVLMTIGVTFCIIGITNYIFGP----------TL 118

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T     +        F        + +     ++  +   + RTA     R   DN   
Sbjct: 119 KTIPLPEMLRGSVDLGFRAIAKHRIFAIGCGLAVAVGLWYAVERTAFGVKLRAAVDNANM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FA++       G   A          +     +  + +V +G   
Sbjct: 179 VAALGVRTEIVYAVSFALAIGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGRAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L  +      +                        +A+ +++ +    L
Sbjct: 237 SIPGALVACLLLGAIDTTGRYLA--------------PEYGEFFFYLAVIVIVTLFPRGL 282

Query: 340 LRL 342
              
Sbjct: 283 AGR 285


>gi|332715988|ref|YP_004443454.1| ribose ABC transporter membrane spanning protein [Agrobacterium sp.
           H13-3]
 gi|325062673|gb|ADY66363.1| ribose ABC transporter, membrane spanning protein [Agrobacterium
           sp. H13-3]
          Length = 333

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/298 (11%), Positives = 85/298 (28%), Gaps = 17/298 (5%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                   + ++  +     + A G + V+ + G L L+     A  A   ++  +   +
Sbjct: 41  PNFIGIDNLLNVVTRSAFIAIIALGATYVI-TSGGLDLSVGAMVAFVASLMILFMNSGVI 99

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           +  L++ ++AM            +         I   I +     I              
Sbjct: 100 ANPLVMLLAAMALAIAIGAACGLANGLITTIGRIEPFIATLGTMGIYRGLTTW------- 152

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                      T+R+      +   +    I +   ++ +   +A     L RT      
Sbjct: 153 ----LSQGGAITLRNPEIQTLYRPVYFGNVIGVPVPIIVIFVTAAIAAFVLYRTRYGRHL 208

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  ++        +++  +  A+ V    + +A   +       S       E   + 
Sbjct: 209 TAVGSSEDVARYSGISVVRVRTIAYVVQGLCVAVAVLLYVPRLASTSATTGMLWELQAIT 268

Query: 271 SIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           ++V+      GG+  +        IL  V  +    NF     +     +  +    +
Sbjct: 269 AVVVGGTALRGGVGRIWGTICGAFILEIVGNIMILSNFVSEYLIGAIQGAIIIIAMLV 326


>gi|237814446|ref|YP_002898897.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
 gi|237503625|gb|ACQ95943.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
          Length = 349

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 59/327 (18%), Positives = 116/327 (35%), Gaps = 23/327 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+A +  L     +    +  Y        L   + A G++++   LGL+ L+     
Sbjct: 25  LALVATLGTLAAIALVVPAVADAYWIKTLTSALTVSIAAAGVALLYRQLGLVCLSQHALL 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G +   +  +  G    L +   A    A GMI GLP+L+ RG YLA+ TL+M+  FQ
Sbjct: 85  GVGGWI-ALRLAHLGAPFELCVLAGAAGGSAIGMIAGLPALRLRGLYLALVTLMMAGGFQ 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++        G                +    R           +   +  +     L+
Sbjct: 144 VVVSAIGFPDGGGG----------FTGHLSFGARQMMARPLVGQSDAAYFRYVAAWAALA 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++I   RR+ +  +W  IR  +    +    ++  +  AF ++    G++G   A S  
Sbjct: 194 FALIELHRRSKVGRSWALIRRGEMPALAAGVNVVLYQTWAFGLAGLLAGLSGGLLAGSVG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           ++    F  SE++++ ++ ++GG+           +L  V  L                 
Sbjct: 254 QLDGRAFAASESVLLFALSVVGGVYHWFGALITGLLLRAVPALLTDFG------------ 301

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                       AL   ++     +  
Sbjct: 302 VNGYLAMIFFGAALLHALVTAPAGIAG 328


>gi|27380894|ref|NP_772423.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354060|dbj|BAC51048.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 346

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/317 (13%), Positives = 93/317 (29%), Gaps = 22/317 (6%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L +L ++     +L  G   + + +  +  Q  +  + A G++ V+   G + L+  
Sbjct: 35  AGMLPVLLLLCAGFHYLSDGRFFTGQNLGIVLQQAAVNTVLAAGMTFVI-LTGGIDLSVG 93

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
              A  A +  +  S+      L +P + +     G++ G      R             
Sbjct: 94  SILAASAMA-GLTISKLPELGALWLPAAVLTGLGFGVVNGALIALLRLPPF--------- 143

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                ++    +T  +    +      +               + V     + ++ +   
Sbjct: 144 -----IVTLGSLTAVRGLARLLGADTTVFNPSIPYAFIGNGSLTLVPGVASIPWLSVIAL 198

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +     L LRRT +      +  N+ A       +    +  +  S    G+ GA  AA
Sbjct: 199 LVILVSWLVLRRTVLGVHIYAVGGNESAARLAGIKVWAVLIFVYGASGLLAGLGGAMQAA 258

Query: 252 SRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYY 305
                +      S  +  I+ VIL      GG+ S+        I+  +           
Sbjct: 259 RLYAANGLQLGQSYELDAITAVILGGTSFVGGIGSIWGTLVGALIIAVLSNGLILTGVSD 318

Query: 306 FNSLLKFDCSFNMRHTT 322
               +            
Sbjct: 319 IWQYVIKGLVIIGAVAL 335


>gi|271967282|ref|YP_003341478.1| inner-membrane translocator [Streptosporangium roseum DSM 43021]
 gi|270510457|gb|ACZ88735.1| inner-membrane translocator [Streptosporangium roseum DSM 43021]
          Length = 297

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 87/303 (28%), Gaps = 17/303 (5%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +       Y + A G S+V G + LL+      Y +GA+    +    G    +   ++ 
Sbjct: 7   NGLFVGSFYALVALGYSMVYGIIKLLNFAHGDLYMLGAFVGFAILGAVGG---VSSSMAL 63

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
            +     +   + +         IA   +    +  L+      +      +        
Sbjct: 64  PLLLVVLLATMVLTGLAGVALERIAYRPLRRAPRLSLLITAVGASFALEYGMRAAAGADP 123

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                 +             +    ++     L   + L + RT    A R I  + +  
Sbjct: 124 RVYPVRLGGTSVEVLGARLTLQQLVLVGVAVVLMIGLNLLITRTREGRAMRAIALDPRTS 183

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             +   +       F + SA  G AG    A   +I   M  F   +   +  ++GG+ +
Sbjct: 184 SLMGIDVNAVISRTFFIGSALAGAAGVMAGAYYGKIDFLM-GFLIGLKAFTAAVIGGIGN 242

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +        +L  +           +  +  F               L L + +R   LL
Sbjct: 243 IPGTMLGGLLLGLLESFGTFWLGGEWRDVFAFG-------------VLILFLTVRPTGLL 289

Query: 341 RLR 343
             R
Sbjct: 290 GER 292


>gi|119962431|ref|YP_947734.1| sugar ABC-type transport systems, permease components [Arthrobacter
           aurescens TC1]
 gi|119949290|gb|ABM08201.1| putative sugar ABC-type transport systems, permease components
           [Arthrobacter aurescens TC1]
          Length = 374

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/324 (12%), Positives = 100/324 (30%), Gaps = 13/324 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +    + A+V  +   L          + ++        + A G+S+++   G   
Sbjct: 52  LGRPEVGALVGAIVLFVFFALVSPTFTQPNALATVLYGSSTIGIMAVGVSLLM-IGGEFD 110

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A    A +  +    +  ++W+ + ++ ++S A G I G   +K +       TL
Sbjct: 111 LSTGVAVISSALTASMFSWYFSTNVWVGVILALLVSLAIGFINGWILMKTKLPSFI-VTL 169

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               +   + +    +  G         +    T               V   +F++  L
Sbjct: 170 ATFLMLTGLNLGLTRLIGGSVSSPSISTMDGFDTARGVFASSVTIAGIDVKITVFIWIAL 229

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +            RT + N    +  +  A  ++   +   K+  F        + G 
Sbjct: 230 VAVATWVL------MRTRVGNWIFAVGGDANAARAVGVPVKATKIGLFMGVGFCGWILGM 283

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
               + D +       +E + +I+ VI      GG  S    A    I     +      
Sbjct: 284 HNLFAFDTVQSGEGVGNEFLYIIAAVIGGCLLTGGYGSAVGGAIGAFIFGMANKGIVYAQ 343

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVI 326
           +              +     +++
Sbjct: 344 WNPDWFKFFLGLMLLLATIVNLIV 367


>gi|163847842|ref|YP_001635886.1| monosaccharide-transporting ATPase [Chloroflexus aurantiacus
           J-10-fl]
 gi|222525714|ref|YP_002570185.1| monosaccharide-transporting ATPase [Chloroflexus sp. Y-400-fl]
 gi|163669131|gb|ABY35497.1| Monosaccharide-transporting ATPase [Chloroflexus aurantiacus
           J-10-fl]
 gi|222449593|gb|ACM53859.1| Monosaccharide-transporting ATPase [Chloroflexus sp. Y-400-fl]
          Length = 343

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 48/299 (16%), Positives = 99/299 (33%), Gaps = 19/299 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLF-LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
           +R  +  ++  +  +V  LL+F + +    S +  + +   + I  M A G ++VV    
Sbjct: 8   IRPEQIRELSLIGLIVIALLIFGWQIENFLSARTFNRITSSVAIVGMVAIGQTLVV-LTR 66

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+        AY      +       L+    A++ G    ++    + +      I
Sbjct: 67  NIDLSVGSIVGFTAYFVGAQLAANNGLPPLVAVGLALLVGGTMGLINGLIVAYGRVPAII 126

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL    I++ +LI              A+       ++ S +      + F I +  + 
Sbjct: 127 TTLGTLAIYRMLLIN------------YANARTITVDSLPSWVVELSRQNLFSIGDFAVR 174

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            +            L L  T        I  N +A            L+AF +     G+
Sbjct: 175 PLFAITVVAVVVFQLVLGYTIFGRRLYAIGSNPEAARFAGLPAQRMVLAAFVLCGMLAGL 234

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           AG  F A    I+    +  E   V ++V+      GG  ++        ++  + +  
Sbjct: 235 AGFLFLARFGNITAVAGQGIELESVAAVVVGGVNTFGGSGTVLGALLGAFLIDLLGQGL 293


>gi|239905219|ref|YP_002951958.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
 gi|239795083|dbj|BAH74072.1| ABC transporter permease protein [Desulfovibrio magneticus RS-1]
          Length = 299

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 103/290 (35%), Gaps = 46/290 (15%)

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRY----------GLSIWLLIPVSAMISGACGMIMG 111
             G LSL  +  Y++G Y   I+G+                 L    + ++S   G+ +G
Sbjct: 30  MAGQLSLASIGFYSLGGYVAAIMGTHPALAPLREALGFWMFPLEWLGALILSVILGIAVG 89

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
            P+L+ RG YLA+AT+   ++    ++    I  G  G++   + +              
Sbjct: 90  YPALRLRGIYLALATVAFVQVVNVAVLNMP-IAGGAVGLFGIPQAFESRLD--------- 139

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                        +    +   +  ++  +       A+  +R+++ A  ++       K
Sbjct: 140 -----------YIWFFGPLFLFALFLVWRIGNMGRGLAFFAVREDELAAGAMGVATTGNK 188

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
           ++AF +  A  G+ GA  A   +  +     F  ++  ++ V++GG  S+       A+L
Sbjct: 189 VTAFVLGCALAGVTGAMSAPFLNTWNARQGTFDASVTCLAYVLIGGSRSIWGPLCGAALL 248

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           + + EL   +                     L  + L    +     ++ 
Sbjct: 249 VSLPELLRPLKDS---------------RMILNGVVLVAACVYLPQGIMG 283


>gi|222111636|ref|YP_002553900.1| inner-membrane translocator [Acidovorax ebreus TPSY]
 gi|221731080|gb|ACM33900.1| inner-membrane translocator [Acidovorax ebreus TPSY]
          Length = 294

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 103/303 (33%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +    Y + + GL+++ G L +++      + +GA    +  + +G++ W+++  
Sbjct: 15  LLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGALITWMAMNYFGVNYWVMLIC 74

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I G  G+++    L++      +  L+++     ++        G +G         
Sbjct: 75  APLIVGVIGVVIERLLLRWIYKLDHLYGLLLTLGLTLMIEGVFRSIYGVSG--------- 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +        F+I   +  +V++    +  +    + +T +    R   +N +
Sbjct: 126 -LGYDTPELLEGATNLGFMILPNYRAWVVVASIVVCVATWYVIEKTKLGAYLRAGTENPR 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +A  +A    AG   A                +  + +  +GGM
Sbjct: 185 LVEAFGVNVPVMVTLTYAFGAALAAFAGVLAAPVYQVTPLMGQNLIIVVFAVVV--IGGM 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L  +                     +    +T++ + + +V+L+R   
Sbjct: 243 GSIMGSILTGLGLGVIEGFTKVF--------------YPEASSTVVFVIMAIVLLIRPAG 288

Query: 339 LLR 341
           L  
Sbjct: 289 LFG 291


>gi|120403580|ref|YP_953409.1| inner-membrane translocator [Mycobacterium vanbaalenii PYR-1]
 gi|119956398|gb|ABM13403.1| urea ABC transporter membrane protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 294

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/289 (12%), Positives = 84/289 (29%), Gaps = 23/289 (7%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
             G +G++++        G Y+   +  +   S  + + +S ++    G  MG       
Sbjct: 28  TFGQMGVINMAHGEFIMAGCYT-AYVVQQLVSSAGVSLIISLVVGFFIGGAMGALLEVTL 86

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
              +    L    +   + +  + +     G    +        V              +
Sbjct: 87  IQRMYDRPLDTLLVTFGVGLILQQVARDIFGAPAVN-------VVAPEWLSGGVEILGAV 139

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                 ++L+      A + + L+ + +    R +  N+    +   +     ++ F + 
Sbjct: 140 VPKTRIFILVLAVVCVAVLAVVLKISPMGRRIRAVVQNRDLAETSGISSRRTDITTFFIG 199

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           S    +AG   A +    +      S  I    +V++GG+  +     A   L  +    
Sbjct: 200 SGLASVAGV--ALTLIGSTSPTIGQSYLIDAFLVVVVGGLGQIKGTVIAAFTLGFLNSFI 257

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                     ++ F                   +  R   L  +RT S 
Sbjct: 258 EYNTTASLAKVIVFVIIVIF-------------LQARPQGLFTVRTRSL 293


>gi|39934818|ref|NP_947094.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009]
 gi|39648668|emb|CAE27190.1| putative branched-chain amino acid transport system permease
           protein [Rhodopseudomonas palustris CGA009]
          Length = 277

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 89/297 (29%), Gaps = 22/297 (7%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
             L+Y + A GL+++ G + + +        +  Y    L + + +   L  P+      
Sbjct: 1   MGLLYGLVAVGLALIFGLMDVTNFAHGEFLMLAMYITFFLFAFFAIDPILAAPLVGAAMF 60

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
             G ++ L  ++F       A    + I    +     +     G+          +   
Sbjct: 61  VFGAVIYLLVVRF-------AMRARANIGMVQIFTTFGLAILMRGLAQYFFTPDYRSINV 113

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           S +         V   +      L       ++  ++++T    A    R++  A   + 
Sbjct: 114 SWLGGKTLEIGGVFLPVPQLVGALVSIAAFGALYFFMKKTDFGRALEATREDAGAVALVG 173

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                     + + SA IG+AGA  A             S  +I    V LGG  S+   
Sbjct: 174 IDKNKVFALGWGLGSALIGLAGAVMAIFFYI--YPDVGASFALIAYVTVALGGFGSVFGA 231

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                I+  V      +      S+              +     LV+ +R   L  
Sbjct: 232 FAGGIIVGLVEATTAMILPPSLKSIG-------------IYAVYLLVVFIRPRGLFG 275


>gi|241764227|ref|ZP_04762260.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
 gi|241366446|gb|EER60957.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
          Length = 309

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/310 (10%), Positives = 96/310 (30%), Gaps = 18/310 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA-----YSYVILGSRYGLSIW 93
           +    +  ++Y + A G  ++  + G+ +          A     ++  +       +  
Sbjct: 8   LIGGLMAGMLYSLVALGFVLIYKASGVFNFAQGAMVLFAALAMARFAEWLPAWTGIDNAI 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           +   ++ +I+G    ++     K    +L         +    +  +             
Sbjct: 68  VTTLIAFVIAGVAMFVVAWLIEKLVLRHLVNQEGATLLMATLGITYFLEGLGQTLFGSDI 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            ++               F    ++ +  +    +    ++   + +  +T+   A R +
Sbjct: 128 YKIDIGMPKEPIFALESVFEGGILVNKEDIIAAAIAAALVALLSVFFQ-KTSTGRALRAV 186

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            D+ +A  S+   +    +  + V+     +AG  + +            +  +  + +V
Sbjct: 187 ADDHQAAQSIGIPLNRIWVIVWCVAGVVALVAGMIWGSKL---GVQFSLTTVALRALPVV 243

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ILGG+TS+        I+    +L       Y    ++   +          +   + +L
Sbjct: 244 ILGGLTSVPGAIIGGLIIGVGEKLSEVYLGPYVGGGIEIWFA---------YVLALVFLL 294

Query: 334 MRSHSLLRLR 343
            R   L   +
Sbjct: 295 FRPQGLFGEK 304


>gi|254467446|ref|ZP_05080856.1| inner-membrane translocator [Rhodobacterales bacterium Y4I]
 gi|206684447|gb|EDZ44930.1| inner-membrane translocator [Rhodobacterales bacterium Y4I]
          Length = 306

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/306 (17%), Positives = 110/306 (35%), Gaps = 15/306 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++  + A GL++V G +GL++L     Y +GA++   +    G  +  LI  
Sbjct: 10  ILNGLQLGVMLFLMAAGLTLVFGVMGLINLAHGSLYMVGAFAAAAVAGWTGSFLLALIAS 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A  + A  ++  +   +              +    +L  +  I     G       + 
Sbjct: 70  LAAAAAAGALMELVVIRRLYRR----------DHLDQVLATFALILIFSEGTRWLFGSFP 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   V S +         + Y ++   ++L    ++A + L + RT I    R    +++
Sbjct: 120 LFLDVPSYLSGPVSLPGGIEYPLYRLTIILIGLGIAAGLFLLIARTRIGIQIRAGEADRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +A  G+AGA   A +             I+   ++++GG+
Sbjct: 180 MIAALGVDISKLYTLVFALGAALAGLAGALVGAIQSV--QVGMGEPVLILAFVVIVIGGI 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF---DCSFNMRHTTLMVIALFLVILMR 335
            S+        ++     L        F   L       +     + L+ I +  ++L+R
Sbjct: 238 GSIKGALAGALLVGMTDTLGGVFLPKLFALFLDPASAASAGASLASMLIYILMAAILLVR 297

Query: 336 SHSLLR 341
              L  
Sbjct: 298 PSGLYG 303


>gi|134281496|ref|ZP_01768204.1| ABC transporter, permease protein [Burkholderia pseudomallei 305]
 gi|134247163|gb|EBA47249.1| ABC transporter, permease protein [Burkholderia pseudomallei 305]
          Length = 349

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 59/327 (18%), Positives = 115/327 (35%), Gaps = 23/327 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+A +  L     +    +  Y        L   + A G++++   LGL+ L+     
Sbjct: 25  LALVATLGTLAAIALVVPAVADAYWIKTLTSALTVSIAAAGVALLYRQLGLVCLSQHALL 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G +   +  +  G    L +   A    A GMI GLP+L+ RG YLA+ TL+M+  FQ
Sbjct: 85  GVGGWI-ALRLAHLGAPFELCVLAGAAGGSAIGMIAGLPALRLRGLYLALVTLMMAGGFQ 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++        G                +    R           +   +  +     L+
Sbjct: 144 VVVSAIGFPDGGGG----------FTGHLSFGARQMMARPLVGQSDAAYFRYVAAWAALA 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++I   RR+    +W  IR  +    +    ++  +  AF ++    G++G   A S  
Sbjct: 194 FALIELHRRSKAGRSWALIRRGEMPALAAGVNVVLYQTWAFGLAGLLAGLSGGLLAGSVG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           ++    F  SE++++ ++ ++GG+           +L  V  L                 
Sbjct: 254 QLDGRAFAASESVLLFALSVVGGVYHWFGALITGLLLRAVPALLTDFG------------ 301

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                       AL   ++     +  
Sbjct: 302 VNGYLAMIFFGAALLHALITAPAGIAG 328


>gi|319785062|ref|YP_004144538.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170950|gb|ADV14488.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 705

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/256 (11%), Positives = 74/256 (28%), Gaps = 16/256 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
             V+   +    +        + ++  Q     +   G++IV+   G + L+    +A+ 
Sbjct: 37  ALVILCAIFGSIVPGFFDLATLTNLSGQTAELGLVVLGMTIVM-VSGGIDLSVGSTFALA 95

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
               +   +    S    +     +   CG I G      R        + +        
Sbjct: 96  VLVTLYGMNVEQWSFGTGLLACLGLGVVCGAINGFLVGFLRMRAFLTTLVTLIIYRSTF- 154

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                                    V S      +          +    +    ++  I
Sbjct: 155 --------------DIVFPQVSTRIVTSGPDSPAYDFLGFGTIRGVPTSFVVFVVIALII 200

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L + R         +   +++ ++    + F   SA+ + S  + ++G FF+A     +
Sbjct: 201 HLVMSRARYGWRLFAVGGARRSAYNAGINVRFILFSAYVLCSVLVALSGFFFSARIGSAA 260

Query: 258 PDMFKFSENIIVISIV 273
            D+    E  ++ + V
Sbjct: 261 SDIGTGLELQVLTATV 276


>gi|145595664|ref|YP_001159961.1| inner-membrane translocator [Salinispora tropica CNB-440]
 gi|145305001|gb|ABP55583.1| inner-membrane translocator [Salinispora tropica CNB-440]
          Length = 324

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/315 (10%), Positives = 83/315 (26%), Gaps = 30/315 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY---------------VILGSR 87
             +  IY + A G ++V G L L++      + +G ++                 +    
Sbjct: 18  LSKGAIYALVALGYTLVYGVLRLINFAHSEIFMVGTFAILGTWSLLGVADNPPIGMAIVY 77

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             + + +    S   +     +      +     L      +      + I    +    
Sbjct: 78  LLIGLVVGALASGATALTVERVAYRRLRRMNAPPLIFLITAIGLSLVLVEIFALWMAGFF 137

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
           +G    +    +G     L +      +          ++L    +   +  ++ RT   
Sbjct: 138 SGRGFTENRLVIGI-PPLLKQETVLSVAGADITNVQIIMVLSALLMLYGLDQFINRTRYG 196

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
              R +  +      +        +  F +     G A   +      I+     F   +
Sbjct: 197 RGVRAVAQSPDTAALMGVHQDRVIMLVFVLGGLMAGAAALLWNMRYG-ITKFDIGFVVGL 255

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              +  +LGG+ +L        +L  +      +    +  +  F     +         
Sbjct: 256 KAFTAAVLGGIGNLRGALLGGLLLGVIEVYAATLTRSTWEDVAAFVVLVVVL-------- 307

Query: 328 LFLVILMRSHSLLRL 342
                + R   LL  
Sbjct: 308 -----IFRPTGLLGE 317


>gi|238763402|ref|ZP_04624365.1| Xylose transport system permease protein xylH [Yersinia
           kristensenii ATCC 33638]
 gi|238763483|ref|ZP_04624445.1| Xylose transport system permease protein xylH [Yersinia
           kristensenii ATCC 33638]
 gi|238698265|gb|EEP91020.1| Xylose transport system permease protein xylH [Yersinia
           kristensenii ATCC 33638]
 gi|238698346|gb|EEP91100.1| Xylose transport system permease protein xylH [Yersinia
           kristensenii ATCC 33638]
          Length = 394

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 49/355 (13%), Positives = 100/355 (28%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  +A++     F   GA  S + I ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 33  MLAAIAIIMLFFTFTTEGAYLSARNISNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 91

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM---- 129
             +   +  I     G  + L I V+  +    G   G      +     +    M    
Sbjct: 92  MGLLGGAAAIFDVWLGWPLPLTIVVTLGLGLVLGAWNGWWVAYRKVPSFIVTLAGMLAFR 151

Query: 130 -------------------------------------SEIFQNILIKWKPITNGKAGIYV 152
                                                  +   ++ +W+  ++       
Sbjct: 152 GILIGITNGTTVSPTSNAMSQIGQSYLPNGFGFGIGAIGLMLFVVWQWRRRSHRIRLGLP 211

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                   T               +     +   +L +  L  + I    RTA       
Sbjct: 212 VAAPQGDVTRQTITAIIVLGAIYLLNDYRGVPTPVLILTALMLAGIFMATRTAFGRRIYA 271

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N  A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 272 IGGNIDAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 331

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 332 VIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGAILLLAVWM 386


>gi|291296751|ref|YP_003508149.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
 gi|290471710|gb|ADD29129.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
          Length = 304

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 15/305 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +Y + A G  +V  +  +++        IGAY    +   + L + +L+ + 
Sbjct: 11  LNGLANGALYAVIAAGFVLVYRATSVVNFAIAEFMLIGAYLTYTMSLFFPLFLAILLALP 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                   +  G               + +      +       T    G          
Sbjct: 71  LAFIFGVLVERGFVRPLL-----GRNVVAVIMATIGLAATLDGATLILWGPDQKAMGAAD 125

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            + +   +    F    V       + L+    L+  ++L L+ +      R + +++ A
Sbjct: 126 ISQLPKEMPNLAFSLGGVFLSSKAVWSLILALPLAILLVLALKYSRYGVLLRAVSESETA 185

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             ++          A+ +S+    + GAF A +     P        +IV  + ILGG  
Sbjct: 186 ALAMGINAPRVVAVAWGISAVMATIGGAFLAGAAGGGGPGHHLILLGLIVFPVAILGGFD 245

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  ++  +              + +      +    L           R + L
Sbjct: 246 SVPGAVVAGLLIGLIEAFSQLYLESLLPGITQAIPFLIVLLVLLF----------RPYGL 295

Query: 340 LRLRT 344
                
Sbjct: 296 FGQHR 300


>gi|170691039|ref|ZP_02882205.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
 gi|170144288|gb|EDT12450.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
          Length = 360

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 85/307 (27%), Gaps = 19/307 (6%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI- 83
           +  L      S   +  M   + I  + + G+++V+   G + L+      I   +    
Sbjct: 48  VFSLATENFLSTSNMLIMAKHVTIVAILSIGMTLVI-LTGGIDLSVGSIVGISGMAAGYL 106

Query: 84  ---LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                      ++       +I+ A G I+G  +            +    +   +    
Sbjct: 107 LLEGVKIGHHVVFFNPWGVTLIACALGAIIGAVNGYLITALNVAPFIATLGMLYVVRGAA 166

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             + NG           F        +    F        + +   +  +  L+A  I  
Sbjct: 167 LLVNNGS---------TFADLGGNPALGNTGFEFLGNGTILGLSMPVWILVILAAITIFV 217

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
            +RT +      I  N++A           KL  +  S     + G    A      P  
Sbjct: 218 AKRTPLGRRIYAIGGNEQAARFSGIRTNRVKLFVYMFSGFCAAIVGLVITAQLQTAHPLT 277

Query: 261 FKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            +  E   + ++V     ++GG  ++        ++  + +         F  ++     
Sbjct: 278 GQTFELNAIAAVVLGGTALMGGRGTVFGSVVGACVISILGDGMVMCGISDFWQMVIKGLV 337

Query: 316 FNMRHTT 322
                  
Sbjct: 338 IIFAVVI 344


>gi|319782730|ref|YP_004142206.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168618|gb|ADV12156.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 707

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/261 (12%), Positives = 71/261 (27%), Gaps = 16/261 (6%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
           + I  L  V         +        +     Q+  + M   G+++V+   G + L+  
Sbjct: 31  NAIPFLALVATLATFGSVIPGFFKLTALQESTRQLGEFSMVVTGMTVVM-LGGGIDLSVG 89

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +A+  +S V +      SIWL +  S       G I G      R        +    
Sbjct: 90  SIFALSCFSAVYVFFILEQSIWLALAASLATGLIFGAINGYLVGYLRLRAFLTTLVTFIF 149

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                 I                    L T    ++ F    + + +       ++L + 
Sbjct: 150 GRALFDILVT----------TYAADVQLSTATSDVLDFIGDSTFWGLSVSVWLAIILAIV 199

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
              A       R+        +  ++++  +    +       +  S     + G   A 
Sbjct: 200 THIAL-----TRSRPGWHVLAVGGSRRSAHNAGIRVRRTVFMTYVFSGFCASIGGFLIAC 254

Query: 252 SRDRISPDMFKFSENIIVISI 272
                 P      E + + + 
Sbjct: 255 RLSGAGPGTGLNLEIMALTAA 275


>gi|171778905|ref|ZP_02919967.1| hypothetical protein STRINF_00828 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282551|gb|EDT47975.1| hypothetical protein STRINF_00828 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 657

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 99/305 (32%), Gaps = 33/305 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +   Q L++ + A G+ I    L +  L+   ++ +GA S  I+     ++  L    
Sbjct: 361 ILTAISQGLLWAIMAIGVFITFRILDIADLSAEGSFPLGAASTAIMIVNG-INPLLATIG 419

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +     G + G    K +   L    ++++ ++   L+          G      +  
Sbjct: 420 GFVAGMLAGAVAGFLHTKMKIPALLTGIIVLTALYSVNLLVLGSANVSLVGQETLVTVMT 479

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +                    +  + +    L   +++ L  T +  A R   DN  
Sbjct: 480 SALSFSK--------------LYAVILIGVIFVALVILLLVVLLNTQMGLALRATGDNLA 525

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +   K+  + VS+  I +AG+  A +      +M   +         I+ G+
Sbjct: 526 MGEANGIKVDRMKILGYMVSNGLIALAGSLLAQNNGYADMNMGTGT---------IVNGL 576

Query: 279 TSLSKIAKATAILIGVV------ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            S+     A  I+  +        +  G   Y    ++    + + +   L    L  +I
Sbjct: 577 ASI---ILAEVIVKYLPLGKRLWSIVLGSILYRLVLVIILAMNVDAQMLKLASAVLLALI 633

Query: 333 LMRSH 337
           L    
Sbjct: 634 LYVPE 638


>gi|86139737|ref|ZP_01058304.1| putative ABC transporter, permease protein [Roseobacter sp. MED193]
 gi|85823628|gb|EAQ43836.1| putative ABC transporter, permease protein [Roseobacter sp. MED193]
          Length = 293

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 49/298 (16%), Positives = 94/298 (31%), Gaps = 29/298 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
             Q  +Y + A GL +V  +   ++        +GA+         G+  WL   ++ + 
Sbjct: 17  LSQGCLYSLIAIGLVLVYKATEQVNFAQGEFMMLGAFVGYQFIVLMGMPYWLGAMLTLVF 76

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
            GA G  +    ++           I++      L     I  G     +   +      
Sbjct: 77  MGAFGYGVEALVVRRLTGQPVFTVFILTLALGIALRAVAGIIWGFGNYSLPAPVD----- 131

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                         VI        ++    +++++ L+ R      A + +  NQ A F 
Sbjct: 132 -------GNLTLGPVIISWASVLSIVVTAVVASALYLFFRYARQGVAMQALSLNQLAAFY 184

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +     S +A+S+ F G+AG          +   F         +  I+GG  S+ 
Sbjct: 185 MGIPVKRLTSSIWAMSAIFGGIAGLLLGPMTLVSTQMGF---IGFKAFAGAIVGGFGSIP 241

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  ++                    FD  F         + +FLV+L+R   LL
Sbjct: 242 GAVIGCLLIGVTE--------------PFFDIMFPTLKGIGAYLIMFLVLLIRPQGLL 285


>gi|325521006|gb|EGC99954.1| simple sugar transporter permease [Burkholderia sp. TJI49]
          Length = 345

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 94/311 (30%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +V  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 46  VLLVLCIGFGFLTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 104

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A + ++  +  G   WL IP +  +    G + G      R     +    M+ +     
Sbjct: 105 AVASLLASTIPGW-GWLGIPAALAVGLVFGAVNGGLISLLRLPPFIVTLGAMTAVRGVAR 163

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    LG           F        + + ++++  C + A  
Sbjct: 164 L--------------------LGNDTTVFNPQLPFAFIGNGTILGVPWLVVIACAVIAIS 203

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   +L  +A S    G+     AA     +
Sbjct: 204 WFILRRTVLGMRIYSVGGNPEAARLSGINVRAIQLFVYAASGLLAGLGAVMSAARLYAAN 263

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 264 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLTNGLVLLGVSDIWQYII 323

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 324 KGLVIIGAVAL 334


>gi|296161989|ref|ZP_06844788.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295887733|gb|EFG67552.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 291

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/284 (11%), Positives = 75/284 (26%), Gaps = 13/284 (4%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               +IY + A+G  +   + G L+     A  +GA   + L +       ++  V    
Sbjct: 12  IALGMIYAVIAFGYQLTFATSGTLNFGQGDALMLGALVGLTLVTLGVNYWLMIPLVCVFG 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 +  +              ++ +     I         G                
Sbjct: 72  LLQGAFVERIGVRPAIRIKSEFGWIMSTIALGIIFKNVAENLWG-----------RDDLR 120

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             S +                  V+ G   +  ++  + R+T    A     +++ A   
Sbjct: 121 FPSPLPEAPLKIFGANVLPMELLVVGGALVMMLAVEFFNRKTIFGKAVVATANDRDAAAL 180

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +          ++A+SS     AG   A     ++         +   ++ I+GG++S  
Sbjct: 181 MGINTGLVITFSYALSSLTAAFAGVLIAPL--TLTGATMGAVLGLKAFAVAIIGGLSSGL 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            I     IL              +  +        +       +
Sbjct: 239 GIVVGGVILGIAETTTGFYLSTGYKDVPGLVLLLIVLALKPAGL 282


>gi|225019832|ref|ZP_03709024.1| hypothetical protein CLOSTMETH_03785 [Clostridium methylpentosum
           DSM 5476]
 gi|224947392|gb|EEG28601.1| hypothetical protein CLOSTMETH_03785 [Clostridium methylpentosum
           DSM 5476]
          Length = 323

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 88/313 (28%), Gaps = 23/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + +V   +  +   A      I  +  +  +  + A G+   +   G   L+     
Sbjct: 17  VFAILIVIAAVFAILNPAIIQFDQILDVLSRSALIGVAAAGMMFAI-CSGGFDLSVGSIL 75

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           ++      +  S+  + +WL I ++ +I   CG+I GL   K +                
Sbjct: 76  SLTTCVIAVTISKNNMPVWLAIVIALVIGCLCGVINGLLITKLKIQPFVAT--------- 126

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L                 R+   G    ++             +IF+  ++       
Sbjct: 127 --LATQLAFLGVALVYSDGSRVTISGGAGDAIKALSTSKVGPFQIQIFLLLLV------Y 178

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + L  + T      R +  N+ A  +    +    +  + ++      AG    +   
Sbjct: 179 VIVYLIYKFTPFGVKTRAVGSNEAATRTTGIKVDKTLIIIYVITGLTAACAGVIQTSRLA 238

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             S  +    E   + +++     + GG  ++        IL  V      +        
Sbjct: 239 TGSATLGNGFELDAITAVILGGTSLAGGKGNVWGTLIGAIILTFVRSGLNMLGVGEAYQK 298

Query: 310 LKFDCSFNMRHTT 322
           L            
Sbjct: 299 LAIAIILLFALAI 311


>gi|91782128|ref|YP_557334.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91686082|gb|ABE29282.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 291

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/284 (11%), Positives = 75/284 (26%), Gaps = 13/284 (4%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               +IY + A+G  +   + G L+     A  +GA   + L +       ++  V    
Sbjct: 12  IALGMIYAVIAFGYQLTFATSGTLNFGQGDALMLGALVGLTLVTLGVNYWLMIPLVCVFG 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 +  +              ++ +     I         G                
Sbjct: 72  LLQGAFVERIGVRPAIRIKSEFGWIMSTIALGIIFKNVAENLWG-----------RDDLR 120

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             S +                  V+ G   +  ++  + R+T    A     +++ A   
Sbjct: 121 FPSPLPEAPLKIFGANVLPMELLVVGGALVMMLAVEFFNRKTIFGKAVVATANDRDAAAL 180

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +          ++A+SS     AG   A     ++         +   ++ I+GG++S  
Sbjct: 181 MGINTGLVITFSYALSSLTAAFAGVLIAPL--TLTGATMGAVLGLKAFAVAIIGGLSSGL 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            I     IL              +  +        +       +
Sbjct: 239 GIVVGGVILGIAETTTGFYLSTGYKDVPGLVLLLMVLALKPAGL 282


>gi|300786421|ref|YP_003766712.1| sugar ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299795935|gb|ADJ46310.1| permease component of ABC-type sugar transport system
           [Amycolatopsis mediterranei U32]
          Length = 346

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/310 (13%), Positives = 92/310 (29%), Gaps = 23/310 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L  +V             S + I  + +   I  + A G +IV+     + L+     
Sbjct: 33  IVLALIVLVAFTATQNSRFLSGQSIRDILLGTAILAVLAVGQAIVM-ITRNIDLSVGSVL 91

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A++   L   +     +   +  ++ GA   ++    ++F      + TL     ++
Sbjct: 92  GLSAFAVGTLMKDHPGLPVIAAVLVGLVFGAVCGLVNGALVRFGQVPALVVTLGTLYAYR 151

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +   W                      + +      F        + + +++L    + 
Sbjct: 152 GVSYFWAGGQ-----------------QINADKLPASFLDFGTASVLGLPWLVLIALLVL 194

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + LR          +  + +A       +     +AF VS A  G+AG  FAA   
Sbjct: 195 VVAGIVLRSYRAGRELYAMGSSPQAAQLAGIRVGRNTSAAFLVSGALAGLAGVLFAARFG 254

Query: 255 RISPDMFKFSENIIVISIVILGGM-----TSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +        E  +V + V+ G        S+        +L  +      ++   F   
Sbjct: 255 TVDAAAGTGYELNVVAAAVVGGVAVFGGSGSVWGAGLGALLLTVIGSALAVLDINQFWQQ 314

Query: 310 LKFDCSFNMR 319
                   + 
Sbjct: 315 AIVGALILLA 324


>gi|262274834|ref|ZP_06052645.1| ribose/xylose/arabinose/galactoside ABC-type transport systems
           permease component 2 [Grimontia hollisae CIP 101886]
 gi|262221397|gb|EEY72711.1| ribose/xylose/arabinose/galactoside ABC-type transport systems
           permease component 2 [Grimontia hollisae CIP 101886]
          Length = 332

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 97/312 (31%), Gaps = 18/312 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +++  L L+ V+   +L +      +   I  M +   +  + A GL  VV   G + ++
Sbjct: 15  RHEFYLSLIIVLIVSVLAVISEDFLTLGNIFDMSVSSALLGIMACGL-FVVLISGGIDIS 73

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                AI  Y         G +  +   ++ ++    GM+      K +          +
Sbjct: 74  FPATAAIAQYVAATYILAEGGNFIVAFAIATVVGVLLGMVNATLVYKLKVP-------AI 126

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 + + +  +     G ++     +    +          +    Y+  +   +L 
Sbjct: 127 IITISTLNVFFGLLIYFSNGEWLYGFPDWFMDGIELFTF-----TGSDGYDYGLSLPILT 181

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  + A     + +T +      +  N  A   +   +    L  +    A  G+A    
Sbjct: 182 LIAMIALTAFLMSKTRLGRQIYAVGGNADAASRIGINLFGINLFVYGYMGALAGIASVVQ 241

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
                 ++P+     E  ++ ++V     + GG  +L  +     +L  V      +   
Sbjct: 242 TQITQSVAPNSLMGFELTVLAAVVLGGTSMTGGKGTLFGVVLGVILLAVVKNGLTLLGVP 301

Query: 305 YFNSLLKFDCSF 316
            +   +      
Sbjct: 302 SYWHTVVTGLII 313


>gi|288961220|ref|YP_003451559.1| ribose transport system permease protein [Azospirillum sp. B510]
 gi|288913528|dbj|BAI75015.1| ribose transport system permease protein [Azospirillum sp. B510]
          Length = 321

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 87/311 (27%), Gaps = 23/311 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  VV   ++ +   +  +   + ++  Q  I  + A G++ V+   G + L+     A
Sbjct: 22  LVGLVVLMAVVAILSPSFMTIDNLLNILRQTSINAVIAVGMTYVI-LSGGIDLSVGSVLA 80

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                   L +   +SIWL IP++ ++    G + G+                       
Sbjct: 81  FCGAVCAWLVA-GDMSIWLAIPLTLLLGAGLGAVNGIVVGTGGVQPFVAT---------- 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    +            +                     I    +   ++       
Sbjct: 130 -LVAMTMLRGATLVFTDGRPITTGTGAAADAFWSVGGGYLLGIPVPVVVAAVVFAVCGLV 188

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  RT        +  N+         +   K + +A+S     +AG    A  + 
Sbjct: 189 L-----TRTRFGRYTYAVGGNEVVARLSGIRVNVEKTTIYALSGLLAALAGVILTARLES 243

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+      GG  +L        I+  +      M+   +  ++
Sbjct: 244 AQPTAGAGYELDAIAAVVVGGTSLSGGKGTLFGTLVGALIIGVLNNALNLMDVSSYYQMI 303

Query: 311 KFDCSFNMRHT 321
                  +   
Sbjct: 304 AKGAVILLAVL 314


>gi|316932515|ref|YP_004107497.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315600229|gb|ADU42764.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 288

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 87/299 (29%), Gaps = 25/299 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               ++    + GLSI++G + +++L       IG Y         G+S  + I ++ + 
Sbjct: 12  LAYGMVLFTISIGLSIMMGLMRVVNLAHGAFAMIGGYLASFALVSLGVSYPIAILIAVIG 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +    +       +         T I+  I     I          GI            
Sbjct: 72  AVIISVPFEFLLYRRIYRRSDELTQILLTIGITFFI---------VGIANYIFGPTSKPI 122

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                    F   F +      +V+      + ++ L + +T      R   DN     +
Sbjct: 123 PLPEALRGPFDLGFRMIPAHRLFVIGCGVVTAVALWLMIEKTEFGVRLRAAVDNGDMAEA 182

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L         + FA++       G   A          +     +  + +V +GG  S++
Sbjct: 183 LGIRTQIVYSATFALAVGLAAFGGVVGAELLPV--EPFYALRYMVTFLVVVSVGGAGSVT 240

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
               A+ +L         +   +                    +A+ +++ +  H L  
Sbjct: 241 GAMAASLLLGLADTTGKYLAPEFGE--------------FFFYVAVIVIVYIFPHGLFG 285


>gi|300913587|ref|ZP_07130904.1| inner-membrane translocator [Thermoanaerobacter sp. X561]
 gi|307723398|ref|YP_003903149.1| inner-membrane translocator [Thermoanaerobacter sp. X513]
 gi|300890272|gb|EFK85417.1| inner-membrane translocator [Thermoanaerobacter sp. X561]
 gi|307580459|gb|ADN53858.1| inner-membrane translocator [Thermoanaerobacter sp. X513]
          Length = 389

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/359 (11%), Positives = 93/359 (25%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   +L  L  ++ +      G   + + I ++  Q     + A G+  V+   G + L+
Sbjct: 25  KLYTMLIALIAIWAIFSIATDGNFITPRNISNLLRQATSTGILAIGMVFVI-IAGQIDLS 83

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT--- 126
                 +      IL   Y ++  + I V+  I    G+  G            +     
Sbjct: 84  VGSLLGLTGGIAAILNVWYHVNGIVSILVALAIGVIIGLWNGWWVAYRNVPAFIVTLAGM 143

Query: 127 --------------------------------------LIMSEIFQNILIKWKPITNGKA 148
                                                 L +   F  + +          
Sbjct: 144 LVFRGILIGISKGYTIAPLSSDFQFIGQAYLTQNSGYLLGIIAAFLIVYLVLNSRKTKAK 203

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                  L      +  LI         +     +   +L +  L+        +T    
Sbjct: 204 YNLDIPPLGIDILKMTFLIILVGLFVFILNLYQGVPLSVLILLILALIFSYISSKTVFGR 263

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N +A       +    L  FA++      AG    ++ +  S    + +E   
Sbjct: 264 RVYAIGGNVEAAKLSGIDVKKITLILFAINGLLAAFAGILLTSTLNAASVSAGQNAELDA 323

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + VI      GG+ ++        ++  +      +N   F   +       +    
Sbjct: 324 IAASVIGGASLSGGVGTVFGAVIGALVMASIDNGMSMLNSPPFWQFVVKGLILLIAVWI 382


>gi|89900688|ref|YP_523159.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89345425|gb|ABD69628.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 319

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/309 (13%), Positives = 100/309 (32%), Gaps = 25/309 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +   V  L          S + +  +  Q+++  + A G ++++ + G + L+C +  A+
Sbjct: 18  IALAVTCLFFATQSARFLSGENLSLVLQQVMVVGVLAIGQTLIILTAG-IDLSCGMVMAL 76

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G          YGL+ +  I     ++   G++ GL   + +     +    ++  F   
Sbjct: 77  GGVVMTKFAVDYGLNPYAAIACGLGVTTGFGLLNGLLVTRIKLPPFIVTLGTLNIAFAI- 135

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                                   T + S++       +    E+ +  V + + +  A 
Sbjct: 136 --------------TQIYSESQTITNLPSVMTALGETFNLGSTEVSLGTVTMLLLYAMAW 181

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +L    TA       + +N +A      ++    +  ++++  F G+A     A    +
Sbjct: 182 FVLRE--TAPGRHLYAVGNNPEAARLTGISVDRVLVIVYSLAGLFYGIAAMLSVARTG-V 238

Query: 257 SPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                  +EN+  I+ V+L      GG   +        I+         M        L
Sbjct: 239 GDPNAGQTENLDAITAVVLGGTSLFGGRGIILGSLVGAVIVGVFRNGLTLMGVASVYQTL 298

Query: 311 KFDCSFNMR 319
                  + 
Sbjct: 299 ITGILVILA 307


>gi|325273292|ref|ZP_08139569.1| inner-membrane translocator [Pseudomonas sp. TJI-51]
 gi|324101577|gb|EGB99146.1| inner-membrane translocator [Pseudomonas sp. TJI-51]
          Length = 286

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 101/304 (33%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     +IY + A GL+I+ G L  ++      + +GAY           S WL + +
Sbjct: 9   LLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCY-TAVAITGSFWLALLI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++  A    +    +K          ++++     I+ +   +  G  G  +A     
Sbjct: 68  APLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGPVGKNIAVPPEL 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                 IY  +  +++     +   + L L RT      R   ++ +
Sbjct: 128 RGV----------LILGDFIYPYYRLFLIGFAALIGVGLWLLLERTRFGALVRAGSESTE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L T I       FA+     G+AG  FA  R              I   +V++GGM
Sbjct: 178 TVSLLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGA--QPFVGPEILGIAFVVVVIGGM 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         ++  V  +   +              +    + ++  A+   IL+R + 
Sbjct: 236 GSFGGALVGGLLVGVVQSMMTSL--------------WPQGASLMIYGAMAAGILVRPYG 281

Query: 339 LLRL 342
           L   
Sbjct: 282 LFGR 285


>gi|163745617|ref|ZP_02152977.1| ABC-type transporter, permease component [Oceanibulbus indolifex
           HEL-45]
 gi|161382435|gb|EDQ06844.1| ABC-type transporter, permease component [Oceanibulbus indolifex
           HEL-45]
          Length = 330

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/341 (15%), Positives = 109/341 (31%), Gaps = 18/341 (5%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M   S  L ++  +  L   +  L   L    +       +     ++  + A GLS++ 
Sbjct: 1   MDRISETLGRFGGVYLLPLALAALAFVLIGAPSSWATLTVAGLAMGMMVFLMASGLSLIF 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G + +L+       + GA+    + +     +          + A  +I  +      G 
Sbjct: 61  GLMDVLNFGHSAFVSFGAFVAASVLAALSGWLGADSVFLNAAALALAVIAAMSFGLAAGW 120

Query: 121 YLAIATL--IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           +     +  +  +  + ILI    +   +  I          T +R       +    V 
Sbjct: 121 FFETVIIRPVYHDHLRQILITMGALIVSEQIILAVWGGT-PITVLRPQFLEGAWIIGDVS 179

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
            EI+  +           + L L RT +    R   +N++   +L   I    +  F V 
Sbjct: 180 IEIYRVFAFGLGLAAFIGLYLVLNRTRLGLLVRAGVENREMVEALGFRIDRLFIGVFMVG 239

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           SA   + GA +A     I+         I+V  +VI+GG+ S+        ++       
Sbjct: 240 SALAAVGGAMWAGYETLIT-PALGGEMMIVVFIVVIIGGLGSIEGTLLGALLVGLTANYV 298

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
             +      +                 I +  ++L R + L
Sbjct: 299 GFLAPKLALASNM--------------ILMTAILLWRPNGL 325


>gi|332995969|gb|EGK15596.1| ribose transport system permease protein rbsC [Shigella flexneri
           VA-6]
          Length = 319

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 88/312 (28%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +     + +    +   + +                   Q 
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALTLGAAIGAVTGVIVAKGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        +     ++G+ FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A       +    +  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGINVNK--IIVYSLCGLLASLAGIIEVARLSS 242

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 243 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 302

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 303 VKAVVILLAVLV 314


>gi|307299183|ref|ZP_07578984.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306914979|gb|EFN45365.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 295

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 99/306 (32%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      I+ + A G ++V G + L++      + +  +      + + +  WL +  
Sbjct: 10  LVNGISLGFIFGLIAIGYTLVYGVVKLVNFAHGDVFMMATFFVYYGFTLFMMPWWLAVLF 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +++   G+ +   + +   D   I++L  +     +L     +  G            
Sbjct: 70  GIVVTILLGVGIERVAYRPLRDAPRISSLCAAIGMSFLLQNIATVVFGGRQKSFYVPPSL 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T          F    V  +      ++    +   +   ++RT +  A R +  +  
Sbjct: 130 TRT----------FVVGGVRIQAITITTIVVSIVVLLLLTFLVKRTKMGLAMRALSVDFD 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       FA+ SA   ++   +A    +I              +  I+GG+
Sbjct: 180 TAKLMGINVNRTIAFTFAIGSALAALSAILWALRYPQI-WPFMGVFPGWRAFTAAIIGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L  V  +            + F          L+ + L +++L++   
Sbjct: 239 GSIVGALVGGFMLGMVTIML-----------VAFFPEAAGYRDALIFVLLVVILLVKPTG 287

Query: 339 LLRLRT 344
           L   +T
Sbjct: 288 LFGEKT 293


>gi|241763309|ref|ZP_04761366.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
 gi|241367584|gb|EER61871.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
          Length = 299

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/298 (13%), Positives = 108/298 (36%), Gaps = 26/298 (8%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           +    Y + + GL+++ G L +++      + +GA    +  + +G+  W ++ ++ ++ 
Sbjct: 20  VNGSFYAILSLGLAVIFGLLNVINFAHGALFMMGAVITWMAMTYFGIGYWWMLVLAPLLV 79

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
           GA G+++    L++      +  L+++     ++        G +G              
Sbjct: 80  GAFGVVIERLLLRWIYKLDHLYGLLLTLGLTLLVEGVFRSIYGVSG----------LGYD 129

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
              +        F+I   +  +V++    +       + +T +    R   +N +   + 
Sbjct: 130 TPELLEGATSLGFMILPNYRAWVVVASIAVCIGTWYVIEKTKLGAYLRAGTENPRLVEAF 189

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              +       +A  +A    AG   A         +   +  I+V ++V++GGM S+  
Sbjct: 190 GVNVPLMITLTYAFGAALAAFAGVLAAPVYQV--SPLMGQNLIIVVFAVVVIGGMGSIMG 247

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  L  V      +              +    +T++ + + +V+L+R   L  
Sbjct: 248 SILTGLGLGIVEGFTKVI--------------YPEASSTVVFVIMVIVLLIRPAGLFG 291


>gi|116695440|ref|YP_841016.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113529939|emb|CAJ96286.1| ABC-type transporter, permease component: CUT2 family, fructose
           specific [Ralstonia eutropha H16]
          Length = 340

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 47/311 (15%), Positives = 95/311 (30%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+      L      S + +  +  Q  I ++ A G++ V+   G + L+     ++ 
Sbjct: 41  VLVLLCFGFTLLTENFASLQNLSIIAQQASINLVLAAGMTFVI-LTGGIDLSVGSILSVS 99

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S       L +P + +     G++ G      +     +             
Sbjct: 100 A-VVAMLVSLMPQLAALSVPAALLCGLLFGLVNGALIAFMKLPPFIVTL----------- 147

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                       +    RL    +TV +    F F  +  +  I    V+       + +
Sbjct: 148 -------GSLTAVRGLARLVGNDSTVYNPDIPFAFIGNGDLLGIPWLVVIAVAVVAVSWL 200

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +L  RRT +      +  N +A       +    L  +AVS    G+ G   A+     +
Sbjct: 201 VL--RRTVLGLQIYAVGGNAEAARLSGIKVWVVLLFVYAVSGLLSGLGGVMSASRLYAAN 258

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S++       I+  +      +        + 
Sbjct: 259 GLQLGQSYELDAIAAVILGGTSFVGGVGSIAGTLVGALIIAVLSNGLILLGVSDIWQYII 318

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 319 KGLVIIGAVAL 329


>gi|295680865|ref|YP_003609439.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295440760|gb|ADG19928.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 291

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 89/289 (30%), Gaps = 7/289 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G +++ G  G+L+L       + A    +L    GL  +L   +
Sbjct: 7   LIDGFAISSLYALGAIGFTLIFGVSGILNLAHGGVMLVAALMGWMLAGEAGLGTYLGTLL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +       I  L  ++         +  +    + I +    +  G         L+ 
Sbjct: 67  GVLAGLVTAFITYLLVVRP-----IQRSAAIPGEEKEIFVLTGTLLWGIMIQQGMAWLFT 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +         V        + +    +   + L++ RT    A      N +
Sbjct: 122 DNPVTMRPLISGVAMVGSVRVPYNEIMIAVVCWAVIGMLWLFVNRTRAGKALLAASMNPR 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +    L A+++     G+AG   A+     + +  + +      SIV+LGG+
Sbjct: 182 GLTLLGFELSRIYLLAWSIYGVLAGIAGVLLASFLGVSTNNAGQLT--ASAFSIVVLGGL 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            S+S    A  ++  +  +   +       L        + +       
Sbjct: 240 GSVSGSLMAAYVVGYLETVTAYLIAPTLRPLPALLLLVLVVYVRPQGFL 288


>gi|152997536|ref|YP_001342371.1| monosaccharide-transporting ATPase [Marinomonas sp. MWYL1]
 gi|150838460|gb|ABR72436.1| Monosaccharide-transporting ATPase [Marinomonas sp. MWYL1]
          Length = 352

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/291 (15%), Positives = 91/291 (31%), Gaps = 22/291 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +  +  +     + A G+++V+G+ G + L+     AI      +L       +WL+I  
Sbjct: 48  LLDILHRATPTALVALGMAVVIGTRG-IDLSVGAVIAISGAVTAVLTVNTDFPVWLVILC 106

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +      CG+  G+    F    +    ++M                             
Sbjct: 107 ALGTGVVCGLWNGILVSIFNIQPIVATLILMVAG--------------------RGIAQM 146

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +              +    Y +     +     +    +L +R+TA+      +  N +
Sbjct: 147 ITEGQIVTFHSDVLDAIGNGYFLAFPIRVWIAIGMIVLTVLVMRKTALGLFIEAVGANVR 206

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +        LSA+  S     M+G   AA       +       +  I  V+L G 
Sbjct: 207 ASRLVGIEARLLVLSAYVFSGFCAAMSGIILAADIRGADANNAGLWLELDAILAVVLAGA 266

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            SL+       + I  V +   +      S L    +  ++ T ++ + L 
Sbjct: 267 -SLAGGRIYLLLTIVGVLIIQTLTTAILTSGLPAQYNLVVKATIILAVLLI 316


>gi|146279381|ref|YP_001169539.1| hypothetical protein Rsph17025_3353 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145557622|gb|ABP72234.1| hypothetical protein Rsph17025_3353 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 325

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 100/320 (31%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L   + ++ L+ +   +L+ L   A      + S+    ++  + A G+ +V+   G + 
Sbjct: 4   LQSTEFVIALVLLAAMVLIGLVNPAFWGLDNLFSLAKSNVVIGIMALGVLLVM-ISGGID 62

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++         Y  V        +  L+  ++A   G          ++       I TL
Sbjct: 63  VSFPAIAVAALYIVVRAMVELNYNGVLVPFIAAAGIGLVLGGFNAFIIERFRMIPLIVTL 122

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             + I + +++       G  G  + +        +           +       +  ++
Sbjct: 123 GTASIVRGLVL-------GLLGSSIVNINKMPKELIEFGRHDLMTVQAANGATYGLTAMV 175

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    ++ ++ L LR T I  +      + ++               + ++    G AG 
Sbjct: 176 LVYLGIALAMHLVLRHTMIGRSVYAYGTDAESARRAGFNTRRTIWFVYCLAGLLAGFAGM 235

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
              +   + +P  F+  E  ++ ++V     I GG  S+        +L+ V      + 
Sbjct: 236 LHTSMIWQANPRDFQGLELDVIAAVVLGGASIFGGRGSVVGTLIGVFMLVMVKNSLILLK 295

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
                  +            
Sbjct: 296 VDTTWQRVVVGIIIVAATAI 315


>gi|187922915|ref|YP_001894557.1| branched-chain amino acid ABC transporter inner membrane protein
           [Burkholderia phytofirmans PsJN]
 gi|187714109|gb|ACD15333.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
          Length = 291

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/284 (11%), Positives = 75/284 (26%), Gaps = 13/284 (4%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               +IY + A+G  +   + G L+     A  +GA   + L +       ++  V    
Sbjct: 12  IALGMIYAVIAFGYQLTFATSGTLNFGQGDALMLGALVGLTLVTLGVNYWLMIPLVCVFG 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 +  +              ++ +     I         G                
Sbjct: 72  LLQGAFVERIGVRPAIRIKSEFGWIMSTIALGIIFKNVAENLWG-----------RDDLR 120

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             S +                  V+ G   +  ++  + R+T    A     +++ A   
Sbjct: 121 FPSPLPEAPLKVFGANVLPMELLVVGGALVMMLAVEFFNRKTIFGKAVVATANDRDAAAL 180

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +          ++A+SS     AG   A     ++         +   ++ I+GG++S  
Sbjct: 181 MGINTGLVITFSYALSSLTAAFAGVLIAPL--TLTGATMGAVLGLKAFAVAIIGGLSSGL 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            I     IL              +  +        +       +
Sbjct: 239 GIVVGGVILGIAETTTGFYISTGYKDVPGLVLLLIVLALKPAGL 282


>gi|261821905|ref|YP_003260011.1| inner-membrane translocator [Pectobacterium wasabiae WPP163]
 gi|261605918|gb|ACX88404.1| inner-membrane translocator [Pectobacterium wasabiae WPP163]
          Length = 365

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 91/299 (30%), Gaps = 9/299 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +        +    +   +  M   I I    A G++ V+ + G + L+      
Sbjct: 35  FIALFLILGFFAFTVPGFLATGSLIIMVKHIAINAFLALGITFVIITAG-IDLSIGATLG 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + ++  +     I +   +     +++ + +L    +   I    ++     
Sbjct: 94  LCGMVAGYMITQGIVLPMFGIAIFPSVWVIVPVVLVIGALIGAINGWIITRYNVAPFICT 153

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +   +       A + ++    F G      +    F        + +   +  M  L+ 
Sbjct: 154 LGTMYIVR---GASMLISGGETFPGLGGNPQLGNTGFELIGSGTILGLPLAIWLMLVLAL 210

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I    RR         I DN++A       +   K+  + +S     +AG   ++    
Sbjct: 211 VIAYVARRLPFGRHVYAIGDNERAAELSGVKVRQVKVWVYTISGFCAAIAGIVVSSQLVA 270

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             P      E   + ++V+      GG  ++        ++  + +    M    F  +
Sbjct: 271 SHPATGTAFEMNAIAAVVLGGTSLAGGRGTILGTLIGAFVIGILADGLVMMGVSEFWQM 329


>gi|239945474|ref|ZP_04697411.1| putative ABC transporter permease protein [Streptomyces roseosporus
           NRRL 15998]
 gi|239991940|ref|ZP_04712604.1| putative ABC transporter permease protein [Streptomyces roseosporus
           NRRL 11379]
 gi|291448932|ref|ZP_06588322.1| ABC transporter integral membrane protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291351879|gb|EFE78783.1| ABC transporter integral membrane protein [Streptomyces roseosporus
           NRRL 15998]
          Length = 350

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/318 (12%), Positives = 88/318 (27%), Gaps = 25/318 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +L +LA +  +       A      +  +  Q  +  +   G++ V+   G + L+
Sbjct: 43  RILSLLGVLAALILVGGITEPDAFLDTGNLQLILTQASVIGVVTVGMTFVI-ISGGIDLS 101

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+   S            +  I  +A+I G    ++    + +      IATL M
Sbjct: 102 VGAMVALA--SVWATTLATQEYGFAGIAFTAVIVGLAAGLVNGVLIAYGNMVPFIATLAM 159

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
               + + ++                    G T    +           Y + +  +++ 
Sbjct: 160 LASARGLALQITD-----------------GKTQIVTVDSVLDLGLPDSYILGIPPLVIM 202

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              ++    L L RT        +  N +A       +   +L  + +S    G+A    
Sbjct: 203 FAVVTVVGWLILNRTTFGRRTVAVGGNAEAARLAGIDVRRQRLYLYLLSGLCCGIAAFML 262

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFY 304
                          E   + + +I      GG  ++        I   +  +    N  
Sbjct: 263 IVLAGSGQNTNGNLYELDAIAAAIIGGTLLSGGRGTIVGSVLGVLIFTTITNIFALNNLQ 322

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +            
Sbjct: 323 SDVQQIAKGAIIVAAVLV 340


>gi|187921100|ref|YP_001890132.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
 gi|187719538|gb|ACD20761.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
          Length = 298

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 91/302 (30%), Gaps = 20/302 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +YV+FA GL+++ G +G+++      + +GA    +L      +  + + ++
Sbjct: 13  LNTLQAGSVYVLFALGLTLIFGVMGVVNFAHGQFFTLGALLTSVLVPALREAFGMGVALA 72

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
              + A  ++  L        +     L  +     + +       G            +
Sbjct: 73  FTFASAISIVAVLALAALVYQFGFRHYLRDTVGSFILSVGLLLFFEGVFLWVFGGVPRVV 132

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                  +R F         E+    V      ++  + L L  T    A R   D+  A
Sbjct: 133 PNIAPGELRVFG-----AAIELQRLVVFAIAVIITVLLYLMLAFTRFGRAIRATADDAGA 187

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                       L  F V S    ++G   A     +          I     +I+GG+ 
Sbjct: 188 ATLQGIRDKRTLLYGFMVGSFLSAVSGCLTAP--IAVITPAVGNDYLIKGFITIIIGGLG 245

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+         +  +  +          ++              M   + L++L+R   +
Sbjct: 246 SVPGAIFGGLTIALIESVVGYYFDGTMATIG-------------MFCVVALLLLIRPQGM 292

Query: 340 LR 341
           L 
Sbjct: 293 LG 294


>gi|33595075|ref|NP_882718.1| branched-chain amino acid transport system permease [Bordetella
           parapertussis 12822]
 gi|33565152|emb|CAE35948.1| branched-chain amino acid transport system permease [Bordetella
           parapertussis]
          Length = 291

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 92/302 (30%), Gaps = 21/302 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +       Y++F+ GL+++ G + +++      + +      +      +   L + VS
Sbjct: 9   MNSLQIAAAYILFSLGLTLIFGVMRIVNFAHGEFFTLPLLVMGV-LVPLLVGAQLPLIVS 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             +SG  G+   L        +     L        + +    +  G            L
Sbjct: 68  YALSGVLGIAATLLLGGLIYKFALKRFLRDMTGSFVVSVGLSLLLQGVFLETFGGVPTKL 127

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T V   +       +     I    +L+ +      +      + +  A R + ++ +A
Sbjct: 128 PTLVEGTVNILGAFVTVQRLIITGCALLVAVFMCWTIV-----SSRLGKALRAVAEDHEA 182

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                       L+ F +++    +A    +     +S  +      I     +++GG+ 
Sbjct: 183 AMLQGIPYRRIALAGFLIATVLAAIAAVLLSPV--TVSSPIIGNDYLIRGFIAIVIGGLG 240

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+      + ++  +  L        + +               M      V+L+R   +
Sbjct: 241 SIPGAILGSVLIAVIESLGGYYFDPTWAT-------------ITMFALTMFVLLVRPKGI 287

Query: 340 LR 341
           L 
Sbjct: 288 LG 289


>gi|121610992|ref|YP_998799.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121555632|gb|ABM59781.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 294

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 100/298 (33%), Gaps = 26/298 (8%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           +    Y + + GL+++ G L +++      +  GA    +  + +GL+ W ++ ++ ++ 
Sbjct: 20  VNGSFYAILSLGLAVIFGLLNVINFAHGALFMSGALMTWMALNYWGLNYWWMLVLAPLVV 79

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
           G  G ++    L++      +  L+++     ++        G +G+             
Sbjct: 80  GLFGALIERLLLRWIYRLDHLYGLLLTLGLTLLIEGVFRSVYGVSGLGYDPP-------- 131

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
              +        F+I   +  +V+L    +       + +T +    R   +N +   + 
Sbjct: 132 --ELLEGATGLGFMIMPNYRAWVVLASLVVCLGTWYVIEKTKLGAYLRAGTENPRLVEAF 189

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              +       +A  +A    AG   A                +  + +  +GGM S+  
Sbjct: 190 GINVPLMVTLTYAFGAALAAFAGVLAAPVYQVTPLMGQNLIIVVFAVVV--IGGMGSIMG 247

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  L  +                     +    +T++ + + +V+L+R   L  
Sbjct: 248 AILTGLGLGVIEGFTKVF--------------YPQASSTVVFVIMVIVLLIRPAGLFG 291


>gi|804652|gb|AAB46620.1| xylose transport permease [Bacillus sp.]
          Length = 392

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/359 (11%), Positives = 97/359 (27%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  L ++  +   L  G   S + + ++ +Q+ +  + A G+++V+   G + L+
Sbjct: 26  RSYTLVIALVLIALIFGVLTDGEFLSSRNLSNLFMQMSVISILAIGMTLVI-IAGHIDLS 84

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +      IL   YG     +I V+ ++    G+  G            +    M
Sbjct: 85  VGSVVGLTGGIAAILQVWYGWGTVSVIVVAIIVGALIGLWQGWWVSYRNVPAFIVTLGGM 144

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE--------- 180
                 ++      T                      +          ++          
Sbjct: 145 LIFRGILIGISNGETIAPLNKSFEAIGNSYLPYAVGYVLAIIGIIMLFVFVNRNRKKRKL 204

Query: 181 --------------------------------IFMYYVLLGMCFLSASIILWLRRTAISN 208
                                             +   +L +  L+   +    +T    
Sbjct: 205 LGLTVHTKANDYGKAAIYSLCILVLVYMLNRYYGIPIPMLIVVLLAILFVFIAVKTPFGR 264

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N +A       I    L+ F +  A  G+AG    +  +  +    +  E   
Sbjct: 265 YIYAIGGNIEAAALSGINIKRVVLTIFVLMGALSGVAGIILTSRLNAATVSSGEMYELDA 324

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + VI     +GG  ++        I+  +      MN   F   +       +    
Sbjct: 325 IAACVIGGTSLMGGRGNIIGAMIGALIMASIDNGMSMMNIETFWQFIVKGLILIIAVWI 383


>gi|71084047|ref|YP_266767.1| high-affinity branched-chain amino acid transport permease protein
           [Candidatus Pelagibacter ubique HTCC1062]
 gi|71063160|gb|AAZ22163.1| probable high-affinity branched-chain amino acid transport permease
           protein [Candidatus Pelagibacter ubique HTCC1062]
          Length = 286

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 89/285 (31%), Gaps = 14/285 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
               +  +++ + A+G+++  G + ++++       +G Y         G+     I VS
Sbjct: 6   MDGILLGILFALIAYGMALQWGVMNIINIAQGELVIMGGYI-AYFMYLSGIHPAFGIIVS 64

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            ++    G  M    +    D     +++ +     +  +      G             
Sbjct: 65  PIVMYCVGWGMYKLVINKVVDKDLFTSILATFGISILAQQLMNFAFGAD----------- 113

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
               +S        +  V       +        +  +++++R++ +  A R    N +A
Sbjct: 114 VVVAQSDFGTTMLFNDMVTIPNAKLFSGAVCVISAFILVIYMRKSKLGRAIRATAQNARA 173

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L         + F +++A  G+AGA  A                +    IVI+ G+ 
Sbjct: 174 AKILGVDTEKVYAATFGINAALCGIAGACVA--ITFTLHPYTGLPYTVRSFMIVIIAGLG 231

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
           +L  +A +   L    E    +    F     F     +      
Sbjct: 232 NLPAVAISGMGLGIFEEWADYLLGTEFRIAAVFSLLVLILVYRRF 276


>gi|327441810|dbj|BAK18175.1| ABC-type xylose transport system, permease component [Solibacillus
           silvestris StLB046]
          Length = 384

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/339 (12%), Positives = 88/339 (25%), Gaps = 47/339 (13%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             S + I ++  Q+ I  + A G+++V+   G + L+      +      +L    G S 
Sbjct: 43  FLSSRNISNLFTQMSIIAVLAVGMTLVI-VAGHIDLSVGSIVGVTGGIAAMLQVWQGWST 101

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            +++  + +I G  G+  G            +    M      ++      T        
Sbjct: 102 PVVVLAAIIIGGLIGLWQGWWVAYRAVPAFIVTLGGMLIFRGVLIGLSDGQTISSLNPSF 161

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEI------------------------------- 181
                     +   I         + + +                               
Sbjct: 162 KQIGNSYLPFIPGYIIAAIAVILMIAFTVNSRRKRKEMGLLLLPSVIDYGKVTVYSVVLV 221

Query: 182 ----------FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                      +    L +  ++   +    +TA       I  N +A       I    
Sbjct: 222 VITYMLNRYLGIPIPFLIVAVIALIFMFITTKTAFGRRIYAIGGNPEAAALSGINIKRNT 281

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAK 286
           L  F    A  G+AG    A  +  +       E   + + VI     +GG   +     
Sbjct: 282 LYVFISMGALAGVAGVLLTARLNAATVSAGNSYELDAIAACVIGGTSLMGGKGKIFGAII 341

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
              I+  +      MN   +   +       +     ++
Sbjct: 342 GALIMASIDNGMSMMNIGAYWQYIVKGLILILAVWVDII 380


>gi|294085355|ref|YP_003552115.1| ABC transporter ATP-binding protein [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664930|gb|ADE40031.1| ABC transporter ATP-binding protein [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 288

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 97/305 (31%), Gaps = 26/305 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +Y + A G +++ G +  +++       +GAY    + +  G  +  L+  +
Sbjct: 9   LNGLTLAALYFLAASGFTLIFGLMRTVNMAHGGLLLLGAYLGYEITTASGSWVIGLVGSA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
              +    +I      +++G+ L    L ++       +           I +   L   
Sbjct: 69  IGTAAVGALIQACLLGRYQGEELRQTLLTIALSIILADLMLAYWGGITYQIEMPALLSGS 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                        P   + Y     +V++    +   + L + RT +    R   D++  
Sbjct: 129 VF----------LPVLNIGYAAVRIFVMVLAIGIGVGLWLLISRTKLGMMIRAGVDDRDM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   +    +  FA+  A  G+AG   A++         ++      + +VI+GGM 
Sbjct: 179 LRALGFNVGRIFIYVFALGGALAGVAGNVAASALSVAPGTDVQYLL--FSLVVVIVGGMG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+   A    ++    +                               + LV+  R   L
Sbjct: 237 SVGGAALGALMVGLAEQYGLAYA--------------PTYSVVFTFGLMVLVLAFRPQGL 282

Query: 340 LRLRT 344
           +    
Sbjct: 283 IGKAE 287


>gi|167570219|ref|ZP_02363093.1| branched-chain amino acid ABC transporter, permease/ATP binding
           protein, putative [Burkholderia oklahomensis C6786]
          Length = 345

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 101/300 (33%), Gaps = 12/300 (4%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
            +  + L         + ++     Q    ++ A   ++++G+ GLLS        +GA+
Sbjct: 3   WLALIALLAVPALVWPRGWMLGYLAQTAALIVLALSYNLLLGATGLLSFGHAAFAGLGAF 62

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +   + +RYGL + L+     +     G + G  + +  G   A+ TL + E+       
Sbjct: 63  AAAHVFNRYGLPLPLVPLAGGVAGAGFGALFGFIATRRAGTAFAMITLGLGELVAAAAWS 122

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                 G  G+ +                     +      +  Y ++   C  +A+ + 
Sbjct: 123 VPGWFGGAGGVSI------------DRASGPALGAWHFARPMHAYALIALWCVGAAAAMR 170

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L  T  +     +RDN     +L T     + +    ++ F G++GA      +  + +
Sbjct: 171 ALAGTPFARLANAVRDNPARVAALGTDPRRVRYAMAVAAAFFAGVSGALTLIDVEVATSE 230

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                 +  V+   ++GG T          +L         ++  +   L     +  + 
Sbjct: 231 SVGMLRSGAVLFATVIGGATGFFGPVVGAVLLTFFSVFVASVSRAWLLYLGVLFVAVVLA 290


>gi|114769892|ref|ZP_01447502.1| Sugar (ribose) ABC transporter (permease) [alpha proteobacterium
           HTCC2255]
 gi|114549597|gb|EAU52479.1| Sugar (ribose) ABC transporter (permease) [alpha proteobacterium
           HTCC2255]
          Length = 357

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 91/298 (30%), Gaps = 14/298 (4%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
             +  ++  +  + +Q+ I  + A G+S V+ + G + L+     A  A   +  G    
Sbjct: 60  FDSIFNEARLKIIILQVAIIGIIALGVSQVIITAG-IDLSSGPLVAATAMIAMSFGQTE- 117

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
               L+   +   +      M LP +      L+    I +     I I   P      G
Sbjct: 118 ----LVNGYANPKALFGTWAMDLPVIIPIVVGLSFGAFIGAINGTFIAIFKIPPFIATLG 173

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +++  R   L  +  + I F       +   +      L +        L +R T     
Sbjct: 174 MFLICRGIALWWSSGNPISFPTDQYKAIGDGMMPVVWFLSLA---VIFHLIMRYTVYGKH 230

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              I  N++A       +   K+  + +++     AG   ++        M +F E   +
Sbjct: 231 TYAIGSNEEAARMSGINVKRHKIMVYMIAAMLAAFAGVVLSSKASTAQAGMGEFYELFAI 290

Query: 270 ISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
              VI      GG  S+        +L  +      +       L+            
Sbjct: 291 AMAVIGGISLTGGRGSIIGTVLGAMVLGVIRSGFTYIKLDGSYQLMAMGAIIISAVIL 348


>gi|62317501|ref|YP_223354.1| branched-chain amino acid ABC transporter permease [Brucella
           abortus bv. 1 str. 9-941]
 gi|83269483|ref|YP_418774.1| inner-membrane translocator [Brucella melitensis biovar Abortus
           2308]
 gi|189022754|ref|YP_001932495.1| Bacterial inner-membrane translocator [Brucella abortus S19]
 gi|237817052|ref|ZP_04596044.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus str. 2308 A]
 gi|254690997|ref|ZP_05154251.1| Bacterial inner-membrane translocator [Brucella abortus bv. 6 str.
           870]
 gi|254698781|ref|ZP_05160609.1| Bacterial inner-membrane translocator [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254732226|ref|ZP_05190804.1| Bacterial inner-membrane translocator [Brucella abortus bv. 4 str.
           292]
 gi|256256182|ref|ZP_05461718.1| Bacterial inner-membrane translocator [Brucella abortus bv. 9 str.
           C68]
 gi|260544736|ref|ZP_05820557.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038]
 gi|260756591|ref|ZP_05868939.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870]
 gi|260760022|ref|ZP_05872370.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292]
 gi|260763261|ref|ZP_05875593.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882410|ref|ZP_05894024.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68]
 gi|297249543|ref|ZP_06933244.1| branched-chain amino acid transport system permease [Brucella
           abortus bv. 5 str. B3196]
 gi|62197694|gb|AAX75993.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|82939757|emb|CAJ12758.1| Bacterial inner-membrane translocator:Kv channel [Brucella
           melitensis biovar Abortus 2308]
 gi|189021328|gb|ACD74049.1| Bacterial inner-membrane translocator [Brucella abortus S19]
 gi|237787865|gb|EEP62081.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella abortus str. 2308 A]
 gi|260098007|gb|EEW81881.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038]
 gi|260670340|gb|EEX57280.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292]
 gi|260673682|gb|EEX60503.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676699|gb|EEX63520.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870]
 gi|260871938|gb|EEX79007.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68]
 gi|297173412|gb|EFH32776.1| branched-chain amino acid transport system permease [Brucella
           abortus bv. 5 str. B3196]
          Length = 289

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 86/303 (28%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y       + GL+    I ++
Sbjct: 9   VDALAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMIGGYFASYAAQQLGLNYGFAIIIA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + +    + +     +       +  ++M+      +I          GI        L
Sbjct: 69  VVGTMIIAVPVERLLYRRIYGAPELTQVLMTIGVTFCII----------GITNYIFDPTL 118

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T     +        F        + +     ++  +   + RTA     R   DN   
Sbjct: 119 KTIPLPEMLRGSVDLGFRAIAKHRIFAIGCGLAVAVGLWYAVERTAFGVKLRAAVDNANM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FA++       G   A          +     +  + +V +G   
Sbjct: 179 AAALGVRTEIVYAVSFALAIGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGRAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L  +      +                        +A+ +++ +    L
Sbjct: 237 SIPGALVACLLLGAIDTTGRYLA--------------PEYGEFFFYLAVIVIVTLFPRGL 282

Query: 340 LRL 342
              
Sbjct: 283 AGR 285


>gi|330825184|ref|YP_004388487.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|329310556|gb|AEB84971.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 297

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 88/304 (28%), Gaps = 16/304 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++    ++     + A GLS++ G +   ++  +     GAY    L S     +  L+
Sbjct: 3   QFVVDTVLRASDLALIALGLSMLYGLVKFPNVAHMQYAMFGAYVTYALQSGGFPLVVALL 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             S         +  L   +      AIA +    +   ++   + +             
Sbjct: 63  AGSVAAGLLTLGLQVLVFQRLLRGGPAIAMIGSLAVAMLVIAIMQGLAG----------- 111

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + +L R                Y++     L    +L L RT +  + R +  N
Sbjct: 112 --SFPRMFNLPRVEPLVIGGARIAWTQLYLMGTTIVLLVLFMLVLFRTRLGRSMRALSSN 169

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                +               S A  G+ G+  A S              + V +  ILG
Sbjct: 170 PMLANASGLNAERITYFVSFASGAIAGLGGSMLALSTGA--HINLGNDLLLPVFAAAILG 227

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +         ++         +NF                     +I L L +L + 
Sbjct: 228 GLGNPIGAVFGALLIALTETAVTNLNFGPLLGRELAFMPVGYISAGSFLILL-LALLFKP 286

Query: 337 HSLL 340
           + L 
Sbjct: 287 YGLF 290


>gi|297531470|ref|YP_003672745.1| inner-membrane translocator [Geobacillus sp. C56-T3]
 gi|297254722|gb|ADI28168.1| inner-membrane translocator [Geobacillus sp. C56-T3]
          Length = 314

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 101/312 (32%), Gaps = 24/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  ++L +            ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 16  LIGLFLLCIVLSILSDDFLMMDNWLNLLRQVSINALIAFGMTFVI-LTGGIDLSVGSVLA 74

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + ++       ++    +++G     +    +        IATL     F+ 
Sbjct: 75  LSSAITAGMMAQGINGFVAILV--GLLAGMVMGALNGVIITKGKVAPFIATLATMTAFR- 131

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                        G+ +        T   S    F+       + I +  +L+ M +++ 
Sbjct: 132 -------------GLTLVYTDGRPITGFASDDILFQMMGRGYFFGIPVPIILMLMVYIAL 178

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++L  ++T        +  N++A       +   K+  +A++     +AG    +  + 
Sbjct: 179 YVVL--KKTTFGRHTYAVGGNEEASRLSGLRVDRLKIYVYALTGTLSALAGLILTSRLNS 236

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +N   F   +
Sbjct: 237 AQPTAGTAYELDAIAAVVLGGTSLSGGKGWIFGTLVGALIIGVLNNGLNLLNVSSFYQQV 296

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 297 IKGAVILLAVLL 308


>gi|238756919|ref|ZP_04618107.1| Inner-membrane translocator [Yersinia aldovae ATCC 35236]
 gi|238704749|gb|EEP97278.1| Inner-membrane translocator [Yersinia aldovae ATCC 35236]
          Length = 347

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 46/332 (13%), Positives = 97/332 (29%), Gaps = 25/332 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLG-----ATKSQKYIDSMGIQILIYVMFAWG 55
           M     RL K   I  ++  +  +   L           +   +  + +Q+ I  + A G
Sbjct: 22  MLGLKGRLPKDTGIFIVMIGIALVFELLGWFIREQSFLLNPNRLLLIVLQVAIIGIIAVG 81

Query: 56  LSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSL 115
           ++ V+ + G + L+     A+ A     L                 IS     ++ LP+ 
Sbjct: 82  VTQVIITTG-IDLSSGSLIALTAVVAASLAQTSDS-----------ISPMYPHLLDLPAA 129

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
                 + +  L        I     P      G+ V+ R      T  + + F     +
Sbjct: 130 IPITAGIGVGILCGFINGFLITRTGIPPFIATLGMMVSARGLAQYYTKGNPVSFLSDEFT 189

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
            +        + L +        + L+ T        I  N  +       +    ++ +
Sbjct: 190 VIGQGAMPVIIFLVVA---VIFHIALKHTRYGKYVYAIGGNMISAKVSGINVNKYLVTVY 246

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAI 290
            ++    G+AG   AA        M +  E   + + VI     +GG+  ++       I
Sbjct: 247 TIAGGLAGLAGVVLAARVSSGQSSMGQSYELDAIAAAVIGGSSLMGGVGRITGTVIGAVI 306

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           L  +      +    +   +            
Sbjct: 307 LGLIKSGFTFIGVDSYIQDIIKGMIIVSAVAI 338


>gi|220923854|ref|YP_002499156.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219948461|gb|ACL58853.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 288

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 83/303 (27%), Gaps = 28/303 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
                +  L+  + A  +++V G     +         GAY   +  +    S+ +   V
Sbjct: 8   FIGGLMSGLVVGLSALAITLVFGIARFPNAATGDVMTAGAYV-ALSMAALTDSVIVGGLV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM   A  ++  L   +      ++  L+ S      L     +  G         L  
Sbjct: 67  GAMTGAALAILSYLLVFRKLSGRSSVTNLLASIGIAFFLRAVIGVGFGHQQQVFQLPLER 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +    +        V         L+               T I    R + D+  
Sbjct: 127 PWRILDVRFQPADLNLVIVAVAALSVVFLILYA------------TPIGRCMRAVADDPG 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                  +     ++ +A++ +   +AG  +      +      +   +   +  ILGG+
Sbjct: 175 LAKVSGISPSRIMIALWALAGSVSAVAGVMYG--IKTVVTPEMGWDMLLPAFAAAILGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +      A  +L  + E+   +  + +   + F     +                R   
Sbjct: 233 GNPVGAICAGILLGTLQEVATPLVGFTYKIAISFVVLLLVLLV-------------RPRG 279

Query: 339 LLR 341
           L  
Sbjct: 280 LFG 282


>gi|170743714|ref|YP_001772369.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168197988|gb|ACA19935.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 289

 Score = 57.6 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 91/305 (29%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +  +   +Y +   G S+V G + +++L       +GAY   ++ +R G+  +L +P+
Sbjct: 6   FVNGLLLGGVYGVATIGFSMVWGVMSIINLAHGAYIMMGAYLAYLMAARLGIDPFLSMPL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                   G  +    L        + TL M+      L+                    
Sbjct: 66  VMAALFCVGFAVQSLLLNPVMRTSVLLTLAMTFGLDLFLV-----------DVFVALFTS 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +V +           V+         L    L+  + L L RT +  A      +++
Sbjct: 115 DIRSVNTSYSSEALAIGPVLVSYVRLAAALLSLALAGLLYLVLTRTRLGQAILATALDRE 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +        +  +           A   AS           S    V  I +LGG+
Sbjct: 175 AARLMGIVPER--IYGYTAGIGAALAGAAGSLASTLFPISPGLGNSFIGAVFVITVLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++    A  +   +           +  ++ F                 +++++R   
Sbjct: 233 GSVTGAVAAGFVYALIQSFAASYLGVNYQEIVAFG-------------LFLVILVVRPQG 279

Query: 339 LLRLR 343
           L   R
Sbjct: 280 LFGKR 284


>gi|157364530|ref|YP_001471297.1| monosaccharide-transporting ATPase [Thermotoga lettingae TMO]
 gi|157315134|gb|ABV34233.1| Monosaccharide-transporting ATPase [Thermotoga lettingae TMO]
          Length = 336

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 91/319 (28%), Gaps = 8/319 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    VV  +   L   A  S      +   + I  + A G++  V   G+  ++     
Sbjct: 14  VITALVVLIVFFSLSTRAFFSLDNFFDILRAVSILTIVAIGVTFSVVVNGM-DVSVGAVT 72

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA--TLIMSEI 132
                    L   + +  ++ I  + +     G++     LK R   L     TL +++ 
Sbjct: 73  GFAVIFSTALMVIWQIPWYIAIVGALLAGIGIGLLNSFLILKLRIPDLLATLGTLYLAQG 132

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            Q  + K   +  G    +   R    G   +  +   +           +   ++ M  
Sbjct: 133 LQMWITKGDAVYRGMTNPWDPMRQVTKGFIPKEFLTIGQGFVFKTENFRGIPVPVIIMLC 192

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +       L  T    A+  +  N +A       +   + +A+ +S+    + G   A+ 
Sbjct: 193 VVLITWFLLEFTRFGRAFYAVGGNIEAARLAGIPVKKYRTAAYVISALLATLGGLVLASR 252

Query: 253 RDRISPDMFKFSENIIV----ISIVILGGMT-SLSKIAKATAILIGVVELCCGMNFYYFN 307
               +           V        +LG    ++         +  ++     +N  ++ 
Sbjct: 253 IGSGAVKAGDPYLLDAVASTYFGFAVLGVRRPNVWGTFLGAVFVGVMLNGLTMLNTPWYI 312

Query: 308 SLLKFDCSFNMRHTTLMVI 326
                             I
Sbjct: 313 QDFIKGLVLVSALGISFAI 331


>gi|146341686|ref|YP_001206734.1| putative sugar ABC transporter permease ribose ABC transporter
           rbsC-like [Bradyrhizobium sp. ORS278]
 gi|146194492|emb|CAL78517.1| putative sugar ABC transporter, permease protein; putative ribose
           ABC transporter rbsC-like [Bradyrhizobium sp. ORS278]
          Length = 326

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 48/333 (14%), Positives = 97/333 (29%), Gaps = 36/333 (10%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R++          ++  L+  L+  +  S  Y+           + A G+ +V+  LG +
Sbjct: 19  RIDPAVAASFGCILLLLLVGSLYSRSFLSPDYLLQQLKVASFLGVIATGMMLVI-LLGQI 77

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+       GA       +       L IP   +   A G++ G+     R        
Sbjct: 78  DLSVPWVVTTGAMMACAAAAHGTTGAILAIPFGILCGAAIGLLNGIGVAYLRIP------ 131

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
             M        +    +     G    D        + +       P++           
Sbjct: 132 -SMIITLAANAVAQGLMVAYTGGFSPQDSASRAMRYLATGTAVPGLPNA----------- 179

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L    + A+ +  L RT    A   I + ++A +          + AF +S A     G
Sbjct: 180 VLAWAIIGAAAVWLLSRTTFGRAIYAIGNRERAAYLSGIDTRRITMLAFMLSGALSAFGG 239

Query: 247 AFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
              A    + +  M        + ++V     ILGG  S         ++  +  +   M
Sbjct: 240 VLLAGYASKAAQSMGDAYLLPSIAAVVLGGTHILGGRGSYLGTIAGVILITLLQSILSVM 299

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
                                +    + L++L+
Sbjct: 300 QISEAG------------RQLIYGAVIILMLLI 320


>gi|91976047|ref|YP_568706.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91682503|gb|ABE38805.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 297

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 103/306 (33%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A    ++  +  +++        IGA+    L ++Y +  +  +P+
Sbjct: 10  LVNGLVVGTLYGVVAMSFVLIYKATQVVNFAQGELLLIGAWVCWTLLAKYQVPFYFGMPI 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +   A G+ + +  L+       I+ ++++     +         G +          
Sbjct: 70  TLVFMFAFGIAIQIVILRPMIGEPIISVIMVTIALSTVFQAALKWIFGVSPQP------- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +        + +  +      L+    +   +  + R +    A R    NQ+
Sbjct: 123 ----FPQIFTSQSVSFAGLQIQTVYVMSLVVSIAMMIGMAWFFRVSKYGLAMRATAFNQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  ++      A+A+S+    +AG   A      S         I V    ILGG+
Sbjct: 179 VAQSLGISVKSVFAMAWAISATVSAVAGVVVAVVNGVSSGLSAY---GIKVFPAAILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +  L   ++  Y +            +       L ++++++ + 
Sbjct: 236 DSIGGAVLGGIIIGLLENLAQYVDSEYLHW--------GNLYEIAPFYVLIIILMIKPYG 287

Query: 339 LLRLRT 344
           L   + 
Sbjct: 288 LFGTKD 293


>gi|227328538|ref|ZP_03832562.1| putative sugar ABC transporter, permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 365

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 87/299 (29%), Gaps = 9/299 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +        +    +   +  M   I I    A G++ V+ + G + L+      
Sbjct: 35  FIALFLILGFFAFTVPGFLATGSLIIMVKHIAINAFLALGITFVIITAG-IDLSIGATLG 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + ++  +     +  +   S    + + L      G          +     
Sbjct: 94  LCGMVAGYMITQGIVLPMFGV--AIFPSVWVIVPVVLLIGALIGAINGWIITRYNVAPFI 151

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             +    I  G + + ++    F G      +    F        + +   +  M  L+ 
Sbjct: 152 CTLGTMYIVRGAS-MLISGGETFPGLGGNPQLGNTGFELIGSATILGLPLAIWLMLVLAV 210

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I    RR         I DN++A       +   K+  + +S     +AG   ++    
Sbjct: 211 VIAYVSRRLPFGRHVYAIGDNERAAELSGVKVRQVKVWVYTISGFCAAIAGIVVSSQLVA 270

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             P      E   + ++V+      GG  ++        ++  + +    M    F  +
Sbjct: 271 SHPATGTAFEMNAIAAVVLGGTSLAGGRGTILGTLIGAFVIGILADGLVMMGVSEFWQM 329


>gi|22124785|ref|NP_668208.1| putative D-ribose transport system permease [Yersinia pestis KIM
           10]
 gi|45440228|ref|NP_991767.1| putative sugar ABC transporter permease [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108808820|ref|YP_652736.1| putative sugar ABC transporter permease [Yersinia pestis Antiqua]
 gi|108810943|ref|YP_646710.1| sugar ABC transporter, permease protein [Yersinia pestis Nepal516]
 gi|145600300|ref|YP_001164376.1| sugar ABC transporter, permease protein [Yersinia pestis Pestoides
           F]
 gi|153997638|ref|ZP_02022738.1| putative sugar ABC transporter, permease protein [Yersinia pestis
           CA88-4125]
 gi|162421141|ref|YP_001605479.1| ribose ABC transporter permease [Yersinia pestis Angola]
 gi|165925766|ref|ZP_02221598.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165936823|ref|ZP_02225390.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010085|ref|ZP_02230983.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212990|ref|ZP_02239025.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167399162|ref|ZP_02304686.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167421693|ref|ZP_02313446.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167423746|ref|ZP_02315499.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467635|ref|ZP_02332339.1| ribose ABC transporter, permease protein [Yersinia pestis FV-1]
 gi|170025599|ref|YP_001722104.1| monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|218930336|ref|YP_002348211.1| putative sugar ABC transporter permease [Yersinia pestis CO92]
 gi|229838937|ref|ZP_04459096.1| putative sugar ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229896417|ref|ZP_04511585.1| putative sugar ABC transporter, permease protein [Yersinia pestis
           Pestoides A]
 gi|229899504|ref|ZP_04514645.1| putative sugar ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229901159|ref|ZP_04516282.1| Ribose ABC transport system, permease protein RbsC [Yersinia pestis
           Nepal516]
 gi|270489342|ref|ZP_06206416.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
 gi|294505027|ref|YP_003569089.1| putative sugar ABC transporter, permease protein [Yersinia pestis
           Z176003]
 gi|21957608|gb|AAM84459.1|AE013690_5 sugar (D-ribose) transport system permease protein [Yersinia pestis
           KIM 10]
 gi|45435084|gb|AAS60644.1| putative sugar ABC transporter, permease protein [Yersinia pestis
           biovar Microtus str. 91001]
 gi|108774591|gb|ABG17110.1| sugar ABC transporter, permease protein [Yersinia pestis Nepal516]
 gi|108780733|gb|ABG14791.1| putative sugar ABC transporter, permease protein [Yersinia pestis
           Antiqua]
 gi|115348947|emb|CAL21906.1| putative sugar ABC transporter, permease protein [Yersinia pestis
           CO92]
 gi|145211996|gb|ABP41403.1| sugar ABC transporter, permease protein [Yersinia pestis Pestoides
           F]
 gi|149289275|gb|EDM39355.1| putative sugar ABC transporter, permease protein [Yersinia pestis
           CA88-4125]
 gi|162353956|gb|ABX87904.1| ribose ABC transporter, permease protein [Yersinia pestis Angola]
 gi|165915472|gb|EDR34082.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922378|gb|EDR39555.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990992|gb|EDR43293.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166205777|gb|EDR50257.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166960612|gb|EDR56633.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167051666|gb|EDR63074.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167057916|gb|EDR67662.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169752133|gb|ACA69651.1| Monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|229681884|gb|EEO77977.1| Ribose ABC transport system, permease protein RbsC [Yersinia pestis
           Nepal516]
 gi|229686996|gb|EEO79071.1| putative sugar ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229695303|gb|EEO85350.1| putative sugar ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229700491|gb|EEO88522.1| putative sugar ABC transporter, permease protein [Yersinia pestis
           Pestoides A]
 gi|262363090|gb|ACY59811.1| putative sugar ABC transporter, permease protein [Yersinia pestis
           D106004]
 gi|262367017|gb|ACY63574.1| putative sugar ABC transporter, permease protein [Yersinia pestis
           D182038]
 gi|270337846|gb|EFA48623.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
 gi|294355486|gb|ADE65827.1| putative sugar ABC transporter, permease protein [Yersinia pestis
           Z176003]
 gi|320016508|gb|ADW00080.1| putative sugar ABC transporter, permease protein [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 381

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 92/299 (30%), Gaps = 9/299 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +      + +    +   +  M   I I    A G++ V+ + G + L+      
Sbjct: 35  FIALFLILGFFSIMVPGFLATGSLIIMVKHIAINAFLALGITFVIITAG-IDLSIGATLG 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + ++  +     I +   +     +++ + +L    +   I    ++     
Sbjct: 94  LCGMIAGWMITQGIVLPMFGIAIFPSVWVVVPVVLVIGALIGAVNGWIITRYNVAPFICT 153

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +   +       A + ++    F G      +    F        + +   +  M  L+ 
Sbjct: 154 LGTMYVVR---GASMLISGGETFPGLQGNPQLGNTGFDLLGSGTLLGLPIAIWIMFILAL 210

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I    RR         I DN++A       +   K+  + +S     +AG   +A    
Sbjct: 211 VIAYVARRLPFGRHVYAIGDNERAAELSGVKVRQVKVWVYTLSGFCAAIAGIIVSAQLVA 270

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             P      E   + ++V+      GG  ++        ++  + +    M    F  +
Sbjct: 271 SHPANGSGFEMNAIAAVVLGGTSLAGGRGTILGTLIGAFVIGILADGLVMMGISEFWQM 329


>gi|319792427|ref|YP_004154067.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315594890|gb|ADU35956.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 286

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 106/297 (35%), Gaps = 27/297 (9%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           ++Y + A GLSIV G L  ++      Y +GAY       ++GL+ W  + +  +  GA 
Sbjct: 16  MLYFLLAVGLSIVFGLLRFVNFAHGAFYLLGAYLC-FQAMQWGLNFWAALVLVPLFVGAL 74

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G +     L+          ++++      + +   +  G  G  VA      G  +   
Sbjct: 75  GWLAEKLLLRRVYAKPHEFHILVTVGLALAVQEIVIVFWGPLGNSVATPDLLQGVVMWGD 134

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                      +Y  +  +V+     L+  +   L  T + +A R   ++ +    L   
Sbjct: 135 F----------VYPKYRLFVIGFTAVLAVLLWWVLEGTRLGSAVRAGSESTEMVSLLGIN 184

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +       FA+ +A   +AG   A  R              +   +V++GG+ S      
Sbjct: 185 VFRVFSLVFALGAATAALAGVLAAPIRGA--EPFMGVEALGVAFVVVVIGGLGSFGGALV 242

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
              ++  V  L   +     +               ++ IA+  V+L+R H LL  R
Sbjct: 243 GGVLIGIVQSLMSTIWPPGAS--------------LMIYIAMGAVLLLRPHGLLGRR 285


>gi|91762885|ref|ZP_01264850.1| probable high-affinity branched-chain amino acid transport permease
           protein [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718687|gb|EAS85337.1| probable high-affinity branched-chain amino acid transport permease
           protein [Candidatus Pelagibacter ubique HTCC1002]
          Length = 297

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 92/299 (30%), Gaps = 14/299 (4%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
             +F       +      +  +++ + A+G+++  G + ++++       +G Y      
Sbjct: 3   FLIFQAPILMVQASMDGILLGILFALIAYGMALQWGVMNIINIAQGELVIMGGYI-AYFM 61

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
              G+     + VS +I    G  M    +    D     +++ +     +  +      
Sbjct: 62  YLSGIHPAFGVIVSPIIMYCVGWGMYKLVINKVVDKDLFTSILATFGISILAQQLMNFAF 121

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G                 +S         + V       +        +  ++++++++ 
Sbjct: 122 GAD-----------VVVAQSNFGTTMLFDNSVTLPNAKIFSGAICVISAIILVIYMKKSK 170

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +  A R    N +A   L         + F +++A  G+AGA  A               
Sbjct: 171 LGRAIRATAQNARAAKILGVDTEKVYAATFGINAALCGIAGACIA--ITFTLHPYTGLPY 228

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
            +    IVI+ G+ +L  +A +   L    E    +    F     F     +      
Sbjct: 229 TVRSFMIVIIAGLGNLPAVAISGMGLGIFEEWADYLLGTEFRIAAVFSLLVLILVYRRF 287


>gi|256059158|ref|ZP_05449367.1| hypothetical protein Bneo5_02215 [Brucella neotomae 5K33]
 gi|261323111|ref|ZP_05962308.1| inner-membrane translocator [Brucella neotomae 5K33]
 gi|261299091|gb|EEY02588.1| inner-membrane translocator [Brucella neotomae 5K33]
          Length = 289

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/279 (12%), Positives = 80/279 (28%), Gaps = 12/279 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y       + GL+    I ++
Sbjct: 9   VDALAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMIGGYFASYAAQQLGLNYGFAIIIA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + +    + +     +       +  ++M+      +I       G            L
Sbjct: 69  VVGTMIIAVPVERLLYRRIYGAPELTQVLMTIGVTFCIIGITNYIFGP----------TL 118

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T     +        F        + +     ++  +   + RTA     R   DN   
Sbjct: 119 KTIPLPEMLRGSVDLGFRAIAKHRIFAIGCGLAVAVGLWYAVERTAFGVKLRAAVDNANM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FA++       G   A          +     +  + +V +GG  
Sbjct: 179 AAALGVRTEIVYAVSFALAIGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           S+     A  +L  +      +   Y            +
Sbjct: 237 SIPGALVACLLLGAIDTTGRYLAPEYGEFFFYLAVIVIV 275


>gi|86749172|ref|YP_485668.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86572200|gb|ABD06757.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 293

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 97/303 (32%), Gaps = 24/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY   A G+S+   SLGL+++     +A+  Y   +     G    +++  
Sbjct: 7   VTNAITLACIYGTLAIGISVTWSSLGLVNMAYGFIFALSGYGAWMASVYIGPYPVVVMAA 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +     G+I+ L +     D        +       L+  + +               
Sbjct: 67  GILTGALGGLIVCLLAFIPIHDKPNFPLRALIATLAISLVGNQILLW---------WFGP 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              ++  L   +      V+         L    L   I+LW+R +      R +  N  
Sbjct: 118 RAKSLPRLFGNWNADILGVVVTSDKLGASLSAILLLTLILLWMRSSRRGLEIRAMMMNPH 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    +   A++ +  G+A    A +           +  I  +SI ++GG+
Sbjct: 178 AASIVGIGVRRTSIYVMALTGSLAGLAAVLLAQTYYVAPFS--GITPMIKGLSIALVGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L     L        +  + +F             + + +V+L+R   
Sbjct: 236 GSIPGAIIGAIMLGVNESLTSTFLGGQYVLITQF-------------LLIIVVLLIRPRG 282

Query: 339 LLR 341
           +  
Sbjct: 283 ISG 285


>gi|153948763|ref|YP_001402207.1| ribose ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|152960258|gb|ABS47719.1| ribose ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 31758]
          Length = 381

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 92/299 (30%), Gaps = 9/299 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +      + +    +   +  M   I I    A G++ V+ + G + L+      
Sbjct: 35  FIALFLILGFFSIMVPGFLATGSLIIMVKHIAINAFLALGITFVIITAG-IDLSIGATLG 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + ++  +     I +   +     +++ + +L    +   I    ++     
Sbjct: 94  LCGMIAGWMITQGIVLPMFGIAIFPSVWVVVPVVLVIGALIGAVNGWIITRYNVAPFICT 153

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +   +       A + ++    F G      +    F        + +   +  M  L+ 
Sbjct: 154 LGTMYVVR---GASMLISGGETFPGLQGNPQLGNTGFDLLGSGTLLGLPIAIWIMFILAL 210

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I    RR         I DN++A       +   K+  + +S     +AG   +A    
Sbjct: 211 VIAYVARRLPFGRHVYAIGDNERAAELSGVKVRQVKIWVYTLSGFCAAIAGIIVSAQLVA 270

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             P      E   + ++V+      GG  ++        ++  + +    M    F  +
Sbjct: 271 SHPANGSGFEMNAIAAVVLGGTSLAGGRGTILGTLIGAFVIGILADGLVMMGISEFWQM 329


>gi|327394734|dbj|BAK12156.1| ribose transport system permease protein RbsC [Pantoea ananatis
           AJ13355]
          Length = 368

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/323 (11%), Positives = 95/323 (29%), Gaps = 20/323 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LR +     L  + +++  +  L      S + +  +     +  +FA GL  VV   G 
Sbjct: 46  LRPHSSQGWLTWVLLLFIGVFSLSSDQFLSVQNLLDLAESYAVTGIFALGL-FVVLVTGG 104

Query: 66  LSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           + ++     ++  Y    +          L I ++       GMI        R   + I
Sbjct: 105 IDISFAAVASVVQYFIATLFVRYQFDHALLSIGLAVACGTLFGMINAWLITWLRVVSIII 164

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
              + S +F  ++      +  +   +       L    +        P   ++    + 
Sbjct: 165 TISMQSLLFGLLMWSTGGRSLYQLPEWWITLRSVLPFEWQGQTFQLGLPLLVLLVIATLT 224

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            VLL              +T +      +  + ++   +   +    L A+    A   +
Sbjct: 225 AVLL-------------NKTHLGRQLYAVGGDAESARRIGIRVGLIHLFAYGWLGAMAAI 271

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCC 299
            G         + P+     E  ++ + V     ++GG  ++S       ++  +     
Sbjct: 272 GGLVQVYRMGEVVPNALVGGELDVLAATVLGGASLMGGKGTVSGTLMGVFLIAILKNGLN 331

Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322
            +    +   +       +    
Sbjct: 332 LIGVSNYFMNIVVGGVIMVAIAV 354


>gi|33593105|ref|NP_880749.1| putative ABC-transporter permease component [Bordetella pertussis
           Tohama I]
 gi|33563480|emb|CAE42367.1| putative ABC-transporter permease component [Bordetella pertussis
           Tohama I]
 gi|332382517|gb|AEE67364.1| putative ABC-transporter permease component [Bordetella pertussis
           CS]
          Length = 290

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 89/307 (28%), Gaps = 27/307 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           ++I S      +Y + A G +I+  + G+++        +G    V             +
Sbjct: 6   QFIFSGVTVGAVYALVALGFAIIFNATGVVNFAQGEFVMLGGMITVFAHGAGLALPLAAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A+ +     +  L     RG  +    +I       I    + +             
Sbjct: 66  LAIAVTAATGVALNRLAIEPARGAPVVSLIIITIGASIFIRGAVQSLFG----------- 114

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                ++ +                   +++ G   +   + L+  RT I  A     +N
Sbjct: 115 -KQIHSLPAFSGDDPIHVLGATILSQSLWMIGGAVAVFIVLWLFFTRTLIGRAVLATSNN 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +     F    +FA+S+A   +AG         ++      +  +   +  +LG
Sbjct: 174 RLAARLVGINTRFIMTLSFALSAAIGALAGVLITP--ITLTSYDVDLTLALKGFAAAMLG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM S         +L  +  L  G     +     F             + +  V+    
Sbjct: 232 GMGSPKGALAGGILLGLLESLTAGYLSSQYKDAAAF-------------LTILAVLFFMP 278

Query: 337 HSLLRLR 343
             L   +
Sbjct: 279 QGLFGHK 285


>gi|242239265|ref|YP_002987446.1| inner-membrane translocator [Dickeya dadantii Ech703]
 gi|242131322|gb|ACS85624.1| inner-membrane translocator [Dickeya dadantii Ech703]
          Length = 297

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 89/304 (29%), Gaps = 16/304 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           ++I    I+     + A GLS+V G +   ++  +    +GA+               ++
Sbjct: 3   QFILDTLIRTADLSLVALGLSLVYGLVRFANIAHMQYAMVGAFLTAAGLQLGMHLSQAML 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + +      ++             A A +    +   ++     +       Y     
Sbjct: 63  FSAVICGLLSMLLHHWVFQPLLKTGTANAMIGSLAVSMVLIALMLGVEGSSPISYQLPIS 122

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                    +     +  +F    + ++  LL               T    A R +  N
Sbjct: 123 DIWQIAGSRISADEVWSLAFTAALVLIFGALLF-------------HTPQGRAIRALASN 169

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +    +          S   ++    G+ G+  A +              + V++  ILG
Sbjct: 170 RDLAAASGLNASAIVHSVNLLAGMLAGIGGSMMAMNASA--YINQGNDLMLPVLASAILG 227

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +         ++     L   +N+ +              +T+   + L L +L+R 
Sbjct: 228 GLGNPLGALFGALLIATTETLVTTINWGWLVDREMAFIPVTWVNTSSF-VMLLLALLLRP 286

Query: 337 HSLL 340
           + L 
Sbjct: 287 YGLF 290


>gi|110668855|ref|YP_658666.1| ABC-type branched-chain amino acid transport system, permease
           protein I [Haloquadratum walsbyi DSM 16790]
 gi|109626602|emb|CAJ53066.1| ABC-type branched-chain amino acid transport system, permease
           protein I [Haloquadratum walsbyi DSM 16790]
          Length = 368

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 103/359 (28%), Gaps = 45/359 (12%)

Query: 16  CLLAVVYPLLLFLFLGATKSQ--------KYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            LLA+V  +LLF   G   S           I    ++ L+  +   GLS+    L   +
Sbjct: 21  ILLAIVGFILLFDLAGQLTSGQITFSSVGSLIWDGLMRGLVIGLAGIGLSMTYSILNFAN 80

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                    GA+S               +    ++     +  G   +   G   AI   
Sbjct: 81  FAHGDYITAGAFSGWATTYLIAGLGRADVGALLLVGAGGSVFGGTLGINVTGTPFAIIAG 140

Query: 128 IMSEIFQNILIKWKPITNGKAG-----------------------IYVADRLYFLGTTVR 164
           I+      + +                                  +         GTT +
Sbjct: 141 IIVAGIAAVGLTLAVDKIAYKPIRDESGIALLITSVGVAFALRYLMQFVFGPSVRGTTSQ 200

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
                  F    V        +++    L   + L L+RT +  A R + DN+       
Sbjct: 201 PASLSLYFIDGVVRVNTHDAALIIIGGALMLGVHLLLQRTKLGKAMRAMSDNEDLARVTG 260

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                   S + +     G+AG  F   +  +  +   +   +++ + VILGG+ S+   
Sbjct: 261 IPTEQVVRSVWVIGGGLTGIAGYMFILWKGTLGFND-GWLLLLLIFAAVILGGIGSIYGA 319

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                ++     +        F     F             I + +++L++   +   R
Sbjct: 320 ITGGLVIGLTASVSVIWIPSTFARATAF-------------IMMIVILLVKPSGIFSGR 365


>gi|54027229|ref|YP_121471.1| putative branched-chain amino acid transporter [Nocardia farcinica
           IFM 10152]
 gi|54018737|dbj|BAD60107.1| putative branched-chain amino acid transporter [Nocardia farcinica
           IFM 10152]
          Length = 294

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 94/292 (32%), Gaps = 29/292 (9%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL---SIWLLIPVSAMISGACGMIMGLPSL 115
             G +G++++        G Y+  ++         S+ + + +  ++ GA G ++ +  +
Sbjct: 28  TFGQMGVINMAHGEFIMAGCYTTYVVQKVISDAGVSLIVALVIGFLVGGALGAVLEMGLI 87

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSS 175
           ++  D      L+   +   +    + +    A   +A                      
Sbjct: 88  RWMYDRPLDTLLVTFGVGLVLQQLARDVFGAPAKNVLAP-----------EWLGGGVTIL 136

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
             +      ++L+      A++   L+ T +    R +  N+    +   +  F  +S F
Sbjct: 137 GAVVPKTRIFILVLAVVAVAALAAVLKATPLGRRIRAVVQNRGLAETSGISSRFTDISTF 196

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            + S   G+AG   A +    +      S  I    +V++GG+  +     A   L  + 
Sbjct: 197 FIGSGLAGVAGV--ALTLIGSTSPTIGQSYLIDAFLVVVIGGLGQIKGTVIAAFALGLLN 254

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                        ++ F     +             + +R   L  +RT S 
Sbjct: 255 SYIEYETTASIAKVIVFVIIVIV-------------LQVRPQGLFTVRTRSL 293


>gi|33599356|ref|NP_886916.1| branched-chain amino acid transport system permease [Bordetella
           bronchiseptica RB50]
 gi|33566952|emb|CAE30865.1| branched-chain amino acid transport system permease [Bordetella
           bronchiseptica RB50]
          Length = 291

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 91/302 (30%), Gaps = 21/302 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +       Y++F+ GL+++ G + +++      + +      +      +   L + VS
Sbjct: 9   MNSLQIAAAYILFSLGLTLIFGVMRIVNFAHGEFFTLPLLVMGV-LVPLLVGAQLPLIVS 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             +SG  G+   L        +              + +    +  G            L
Sbjct: 68  YALSGVLGIAATLLLGGLIYKFALKRFQRDMTGSFVVSVGLSLLLQGVFLETFGGVPTKL 127

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T V   +       +     I    +L+ +      +      + +  A R + ++ +A
Sbjct: 128 PTLVEGTVNILGAFVTVQRLIITGCALLVAVFMCWTIV-----SSRLGKALRAVAEDHEA 182

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                       L+ F +++    +A    +     +S  +      I     +++GG+ 
Sbjct: 183 AMLQGIPYRRIALAGFLIATVLAAIAAVLLSPV--TVSSPIIGNDYLIRGFIAIVIGGLG 240

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+      + ++  +  L        + +               M      V+L+R   +
Sbjct: 241 SIPGAILGSVLIAVIESLGGYYFDPTWAT-------------ITMFALTMFVLLVRPKGI 287

Query: 340 LR 341
           L 
Sbjct: 288 LG 289


>gi|312109361|ref|YP_003987677.1| inner-membrane translocator [Geobacillus sp. Y4.1MC1]
 gi|311214462|gb|ADP73066.1| inner-membrane translocator [Geobacillus sp. Y4.1MC1]
          Length = 313

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 96/312 (30%), Gaps = 24/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  ++L +   +  +     ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 15  LIGFFLLCIVLSILSDSFLTVNNWMNVLRQVSINALIAFGMTFVI-LTGGIDLSVGSVLA 73

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +           +  +++G     +    +        IATL    +F+ 
Sbjct: 74  LSSAITAGIMASGTNGF--TAIIIGLLAGFLMGALNGVVITKGRIAPFIATLATMTMFRG 131

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + +                               F      Y + +   ++ M  +  
Sbjct: 132 LTLVYTD----------------GRPITGFASDDILFQMMGRGYFLGIPVPVVFMIVVYV 175

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           ++   L++T        I  N++A       +   K+  ++++     +AG    +  + 
Sbjct: 176 ALYFVLKKTTFGRHTYAIGGNEEASRLSGIRVDRLKIWIYSLTGGLSALAGIILTSRLNS 235

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +N   F   +
Sbjct: 236 AQPTAGTAYELDAIAAVVLGGTSLSGGRGWIFGTLVGALIIGVLNNGLNLLNVSSFYQQV 295

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 296 IKGLVILLAVLL 307


>gi|239815904|ref|YP_002944814.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239802481|gb|ACS19548.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 442

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 110/332 (33%), Gaps = 33/332 (9%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            L      ++ +            +M  Q+   ++     +I++G  G+LS    +   +
Sbjct: 27  FLIWSLFAIVLIVSPLLFKSSLALTMLSQMGYLIIICLSYNILLGQGGMLSFGHAVYVGL 86

Query: 77  GAYSYVILGSRY-----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           G++  +   +        + +  +  V  +      +++G  + K  G   A+ TL + E
Sbjct: 87  GSFLAIHAMNMGEKGGLQIPLVAIPLVGGLAGMFFAILLGFVTTKKSGTTFAMITLGIGE 146

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +  ++ + +     G+ GI              + +    F       +I +YY++   C
Sbjct: 147 LVASMALMFPSFFGGEGGIT------------TNRVYGPSFFGFNFGPQIQVYYLIAAYC 194

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           F+  +++     T +      +RDN +    +       +  AF ++  F G+ G   + 
Sbjct: 195 FVCTALMYAFTGTPLGRMLNAVRDNPERVEFIGYNTQRVRYFAFIIAGFFAGIGGGLASI 254

Query: 252 SRDRIS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           + + ++  D      +   +    LGG            +L+    L   ++  +     
Sbjct: 255 NFEIVNAADSLSAIRSGGYLLFTFLGGAVFFFGPIIGAVLLVFASILLSELSKAW----- 309

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                          +    +++     +  L
Sbjct: 310 ----------QLYFGLVFVFMVMFAPGGIASL 331


>gi|28901006|ref|NP_800661.1| putative ABC transporter membrane spanning protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153836702|ref|ZP_01989369.1| branched-chain amino acid ABC-type transport system, permease
           component [Vibrio parahaemolyticus AQ3810]
 gi|260366217|ref|ZP_05778677.1| inner-membrane translocator [Vibrio parahaemolyticus K5030]
 gi|260879858|ref|ZP_05892213.1| inner-membrane translocator [Vibrio parahaemolyticus AN-5034]
 gi|260894533|ref|ZP_05903029.1| inner-membrane translocator [Vibrio parahaemolyticus Peru-466]
 gi|260903070|ref|ZP_05911465.1| inner-membrane translocator [Vibrio parahaemolyticus AQ4037]
 gi|28809519|dbj|BAC62494.1| putative ABC transporter, membrane spanning protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149750051|gb|EDM60796.1| branched-chain amino acid ABC-type transport system, permease
           component [Vibrio parahaemolyticus AQ3810]
 gi|308086471|gb|EFO36166.1| inner-membrane translocator [Vibrio parahaemolyticus Peru-466]
 gi|308092396|gb|EFO42091.1| inner-membrane translocator [Vibrio parahaemolyticus AN-5034]
 gi|308108370|gb|EFO45910.1| inner-membrane translocator [Vibrio parahaemolyticus AQ4037]
 gi|308114831|gb|EFO52371.1| inner-membrane translocator [Vibrio parahaemolyticus K5030]
 gi|328470908|gb|EGF41819.1| putative ABC transporter membrane spanning protein [Vibrio
           parahaemolyticus 10329]
          Length = 297

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 88/306 (28%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I  ++Y + A    ++  S  +++        IGA+          L  ++   +
Sbjct: 10  VINGVIVGMLYGVVAMCFVLIYKSTQVVNFAQGEFLLIGAWVCWAALVHLQLPFFVGFLL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G+ +    L+       I+ ++++               G + +        
Sbjct: 70  TLAFMMVFGIAVQTIVLRPLIGEPIISVIMVTIGLSMFFQALMKWMFGVSAVSYPQVFET 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +  E      L+    +  +   + + + +  A R    NQ+
Sbjct: 130 -----------NVVNIGGLNVEFAYILSLIFSMIIMGAFYWFFKFSKMGLAMRATAFNQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  +I      ++A+S+     AG                    I V   VILGG+
Sbjct: 179 VAQSLGISIKKVFAISWAISAMVSATAGIVIGIVNGVSDALS---IIGIKVFPAVILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +  +  L    +  Y              +       L +++  + + 
Sbjct: 236 DSVVGAIVGGITIGVLENLAEFFDSQYL--------QVGNLYNIAPFYVLLIILAFKPYG 287

Query: 339 LLRLRT 344
           L   + 
Sbjct: 288 LFGTKD 293


>gi|84500502|ref|ZP_00998751.1| putative amino acid transmembrane transmembrane protein [Oceanicola
           batsensis HTCC2597]
 gi|84391455|gb|EAQ03787.1| putative amino acid transmembrane transmembrane protein [Oceanicola
           batsensis HTCC2597]
          Length = 310

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 113/315 (35%), Gaps = 22/315 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I  L+  M + GL+++   +G+L+      Y +GAY           + W+ + V
Sbjct: 8   LLNGVIYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFA--FTISGSTTFWIALFV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  G ++    L+       +A L+ +     ++ +   I  G            
Sbjct: 66  APVLVGLVGAVVERYGLRKVHANGHVAELLFTFGLAYLIEEIVKIVYG---------KTA 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   +  L+ F  F      +  +  ++L     +   +   L++T      +    +  
Sbjct: 117 VDYRIPDLLNFPAFTIYGASFPAYRIFMLFIAIGMLIGLWYLLKKTRAGLIIQAALTHPH 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +    ++ F +  A  G+AG         ++          IV  +V++GG+
Sbjct: 177 MVGHLGHNVPLIFMTVFGIGCAMAGLAGVIAG--NIFVTDPAMAVQMGPIVFVVVVVGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYF---------NSLLKFDCSFNMRHTTLMVIALF 329
            SL     A+ ++  +     G+N  +           +    D + +     +  + L 
Sbjct: 235 GSLEGAFLASLLIGLIQNFAVGINASFAEIFWFTGLSPTSEIGDITISSLAPVMPFLLLV 294

Query: 330 LVILMRSHSLLRLRT 344
           L+++ R   L+  + 
Sbjct: 295 LMLIFRPRGLMGEQE 309


>gi|126455437|ref|YP_001064339.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a]
 gi|167843687|ref|ZP_02469195.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210]
 gi|242314669|ref|ZP_04813685.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b]
 gi|254184117|ref|ZP_04890708.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655]
 gi|254298616|ref|ZP_04966067.1| ABC transporter, permease protein [Burkholderia pseudomallei 406e]
 gi|126229079|gb|ABN92619.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a]
 gi|157808673|gb|EDO85843.1| ABC transporter, permease protein [Burkholderia pseudomallei 406e]
 gi|184214649|gb|EDU11692.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655]
 gi|242137908|gb|EES24310.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b]
          Length = 349

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 60/327 (18%), Positives = 116/327 (35%), Gaps = 23/327 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+A +  L     +    +  Y        L   + A G++++   LGL+ L+     
Sbjct: 25  LALVATLGTLAAIALVVPAVADAYWIKTLTSALTVSIAAAGVALLYRQLGLVCLSQHALL 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G +   +  +  G    L +   A    A GMI GLP+L+ RG YLA+ TL+M+  FQ
Sbjct: 85  GVGGWI-ALRLAHLGAPFELCVLAGAAGGSAIGMIAGLPALRLRGLYLALVTLMMAGGFQ 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++        G                +    R           +   +  +     L+
Sbjct: 144 VVVSAIGFPDGGGG----------FTGHLSFGARQMMARPLVGQSDAAYFRYVAAWAALA 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++I   RR+    +W  IR  +    +    ++F +  AF ++    G++G   A S  
Sbjct: 194 FALIELHRRSKAGRSWALIRRGEMPALAAGVNVVFYQTWAFGLAGLLAGLSGGLLAGSVG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           ++    F  SE++++ ++ ++GG+           +L  V  L                 
Sbjct: 254 QLDGRAFAASESVLLFALSVVGGVYHWFGALITGLLLRAVPALLTDFG------------ 301

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                       AL   ++     +  
Sbjct: 302 VNGYLAMIFFGAALLHALVTAPAGIAG 328


>gi|153004539|ref|YP_001378864.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5]
 gi|152028112|gb|ABS25880.1| inner-membrane translocator [Anaeromyxobacter sp. Fw109-5]
          Length = 287

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 85/265 (32%), Gaps = 12/265 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+++ G L +++      Y +GA++  +  +  G+  +  + +
Sbjct: 8   LLVGLINGSFYALLSLGLAVIFGLLNVVNFAHGAQYMMGAFAAWMAATYLGVGYFWALLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                G  G+ +    L+       +  L+++     I         G +G   A     
Sbjct: 68  VPAAMGLVGVAVERLLLRRLYGLDNLYGLLLTFGLTLIAEGLFHHAYGNSGNTYAVPAAL 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G               F+   I+  +V++    + A+    + RT +    R   +N K
Sbjct: 128 RG----------GVNLGFMYLPIYRGWVVVVSIAVCAASWFVIERTKLGAYLRAGTENPK 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +    A    AG   A                +  + +  +GGM
Sbjct: 178 LLQAFGVNVPLMFTLTYGFGVALAAFAGVMAAPVYQVTPLMGSSVIMVVFAVVV--IGGM 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNF 303
            S++        +  V  L   +  
Sbjct: 236 GSIAGSIVTGIGIGLVEGLTRYLYP 260


>gi|18312607|ref|NP_559274.1| branched-chain amino acid transport permease protein [Pyrobaculum
           aerophilum str. IM2]
 gi|18160077|gb|AAL63456.1| branched-chain amino acid transport permease protein [Pyrobaculum
           aerophilum str. IM2]
          Length = 290

 Score = 57.2 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 80/270 (29%), Gaps = 14/270 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  +   IY +   GLS++ G L + ++       IGAY        + +   +  
Sbjct: 5   PYFLTGLVIGSIYGLTTLGLSLIFGVLRVANVAHGSFIMIGAYVAYTFFVAWAIPPIVSA 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + +I  A G ++ +  +K  G                 L     +    A +    RL
Sbjct: 65  TAALLIGMAAGYLVYVGVIKPLGKA--------------ELNILVALFALGALLAEVARL 110

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
            +    V           + +  EI      +    ++  + L LRRT    A + +  +
Sbjct: 111 IWGPDFVGYRWSIGSIEIAGLQLEITKLMGAVASLIIAVLLELTLRRTYFGRAIKAVVQD 170

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 +   +      + AV      + G                    +I   I +LG
Sbjct: 171 PIGAMVVGINVERILALSAAVGIGVTALGGVLLTLFIPVGINPYMGGPYTLIGFVIAVLG 230

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           G+ S+     A  +      +   +     
Sbjct: 231 GLGSVMGAYIAGLLFGVFESVGFYVFSSLG 260


>gi|269957256|ref|YP_003327045.1| Monosaccharide-transporting ATPase [Xylanimonas cellulosilytica DSM
           15894]
 gi|269305937|gb|ACZ31487.1| Monosaccharide-transporting ATPase [Xylanimonas cellulosilytica DSM
           15894]
          Length = 347

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 88/291 (30%), Gaps = 13/291 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L +      + A+V             S   I +      I  + A  + +++ + G   
Sbjct: 24  LRRPAVSAAIAALVIMAFFSAITPTFSSPAGIATWLESAAIIGIMAVPVGLLM-TAGEFD 82

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +          +L + YG+ +WL +  +A++  A G++ GL   + R     +   
Sbjct: 83  LSAGVMVGFSGLVTGVLTTHYGIDVWLAMGSAAIVCVAVGVLNGLLVTRTRLPSFIVTLG 142

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               +    L   K I    +   +A    F         R   F         +   V+
Sbjct: 143 TFFVLQGVNLAVLKLIIGQVSIQGMAAVPGFRDVQWLLASRTDLFGMQVQASVWWWLLVV 202

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                  A     L RT   N    +    ++   +   +   K++ FA ++    + G 
Sbjct: 203 -------AVGTWVLTRTRYGNWIFAVGGAFESAREVGVPVKRTKVALFAATALCGWLVGQ 255

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIG 293
                            E I +I  V+      GG+ S    A    I   
Sbjct: 256 IMLFRFGTAQSSTGVGQELIYIICAVVGGCVMTGGVGSAIGPALGALIYGM 306


>gi|259047235|ref|ZP_05737636.1| inner-membrane translocator [Granulicatella adiacens ATCC 49175]
 gi|259036285|gb|EEW37540.1| inner-membrane translocator [Granulicatella adiacens ATCC 49175]
          Length = 327

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 101/314 (32%), Gaps = 23/314 (7%)

Query: 12  DKILCLLAVVYPLLLFLFLG-ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
            K++ L+A++     F     + +S     S+          A G++ V+   G + L+ 
Sbjct: 18  QKLIALIALIVIFTFFAVSSESFRSFDTAVSILDASYYIGFLAIGVTFVI-ITGGIDLSI 76

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                  A    +L ++ G  +WL +    +I G  G+  G+   KF             
Sbjct: 77  GTVMMCSAIVGGVLHTKMGWPLWLALLAILVIGGVFGLFNGILIAKFGLPPFIAT----- 131

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                  +    I+ G + I    +             +     +   +   +  +++  
Sbjct: 132 -------LGTMMISRGLSSIVSNVQSVTFPLRGTGEGWYKDLFRTQDNFPTGLIVLIVVA 184

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              +      L +T I      I  N++A       +I  +  A+ +S    G+AG  +A
Sbjct: 185 IIAAIV----LNKTKIGRYIFAIGSNKEATRLSGVNVIKWEGMAYVISGLLAGLAGIAYA 240

Query: 251 ASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A+   I P      E   +  +V+      GG+ S+        I+  +      ++   
Sbjct: 241 ATYSTILPGTGNGMELDAIAGVVVGGTSLAGGVGSVVGTIIGVFIMSVLKIGLPYIDLQP 300

Query: 306 FNSLLKFDCSFNMR 319
              L        + 
Sbjct: 301 HYQLFITGFVVIVA 314


>gi|254711087|ref|ZP_05172898.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella pinnipedialis B2/94]
 gi|256029468|ref|ZP_05443082.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella pinnipedialis M292/94/1]
 gi|256157664|ref|ZP_05455582.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella ceti M490/95/1]
 gi|261220481|ref|ZP_05934762.1| inner-membrane translocator [Brucella ceti B1/94]
 gi|261318677|ref|ZP_05957874.1| inner-membrane translocator [Brucella pinnipedialis B2/94]
 gi|261756852|ref|ZP_06000561.1| branched-chain amino acid ABC transporter [Brucella sp. F5/99]
 gi|265986477|ref|ZP_06099034.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1]
 gi|265996169|ref|ZP_06108726.1| inner-membrane translocator [Brucella ceti M490/95/1]
 gi|260919065|gb|EEX85718.1| inner-membrane translocator [Brucella ceti B1/94]
 gi|261297900|gb|EEY01397.1| inner-membrane translocator [Brucella pinnipedialis B2/94]
 gi|261736836|gb|EEY24832.1| branched-chain amino acid ABC transporter [Brucella sp. F5/99]
 gi|262550466|gb|EEZ06627.1| inner-membrane translocator [Brucella ceti M490/95/1]
 gi|264658674|gb|EEZ28935.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1]
          Length = 281

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 47/282 (16%), Positives = 103/282 (36%), Gaps = 14/282 (4%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+  +  L +       L  +  ++    +G       +  +   I I  +    L +V 
Sbjct: 1   MTELTQPLPQTRHSYAGLIGIVAIIAASVVGWFLFPDNLALLTRVIAI-ALLVLSLDLVT 59

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           G  G+ +L     +  GAY   I  + +      L+  +  +     G++ G   L+  G
Sbjct: 60  GYCGIATLGHAALFGAGAYGAGIAAAHFGVTDPILMTVIGLLAGAVTGLVSGAVILRATG 119

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
               + ++ +  +F     K    T G  G+         G               F +Y
Sbjct: 120 LAQLVLSIAVVHLFHEAANKASGWTGGSDGLSGISPDPIFGI------------FEFDLY 167

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              +Y   + +  +S   + ++ R+      R ++++     ++  ++  A+L  + +S 
Sbjct: 168 GRTVYIYAVILLLISFIFLRYVVRSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISG 227

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           A  G+ GA  A S   +  D   F+ +   + +++LGG  S 
Sbjct: 228 AVAGIGGALNAISTQVVGLDSLSFTMSAEALVMLVLGGRISF 269


>gi|254455305|ref|ZP_05068734.1| ABC-type branched-chain amino acid transport system, permease
           protein I [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082307|gb|EDZ59733.1| ABC-type branched-chain amino acid transport system, permease
           protein I [Candidatus Pelagibacter sp. HTCC7211]
          Length = 294

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 94/298 (31%), Gaps = 14/298 (4%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            +F     S +      +  +++ + A+G+++  G + ++++       +G Y    +  
Sbjct: 1   MVFQYPMISVQACLDGVLLGILFALIAYGMALQWGVMNIINIAQGDLVILGGYIAYFMYL 60

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
                 W +I    ++      I  L   K     L I+ L  +     + ++      G
Sbjct: 61  YGIHPAWGVIVSPIIMFFVGIAIYKLVINKVVDRDLFISILA-TFGISILFMQLMNFAFG 119

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                             S        ++ V+      +        +  ++++++++ +
Sbjct: 120 AD-----------VVLANSDYGTTMLFNNNVVLPNSKIFSAFISVLFAICLVIYMKKSKL 168

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A R    N +A   L         + F +++A  G+AGA  +                
Sbjct: 169 GRAIRATAQNARAAKILGVDTEKVYAATFGINAALCGVAGALIS--ITFTIHPYMGLPYT 226

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
           I    IVI+ G+ +L  +A +   L    E    +    F     F     +      
Sbjct: 227 IRSFMIVIIAGLGNLPGVAMSGMGLGVFEEFADYILGTEFRIGSVFLLLVLILVYRRF 284


>gi|88856616|ref|ZP_01131272.1| putative ABC transporter permease [marine actinobacterium PHSC20C1]
 gi|88814077|gb|EAR23943.1| putative ABC transporter permease [marine actinobacterium PHSC20C1]
          Length = 341

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 93/320 (29%), Gaps = 23/320 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
               +  +    +   L+ ++      S +    + +   I V+ A   ++V+     + 
Sbjct: 20  FTAREIPVAGALIALILVTYIINPRFLSPQSTKDLMLNATIMVILAVAQALVI-ITRNVD 78

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+      + A+    +   +     +L+ V  MI G     +    +        + TL
Sbjct: 79  LSVGAILGLVAFGTGTVFDMFPTIPLVLVFVIGMIFGGLLGSINGMLVTSAKVPALVITL 138

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               IF+ +L  W                        S      F +  V   I +  + 
Sbjct: 139 GTLYIFRGVLSSWAG-----------------SKQFFSGDNPKAFGNLSVDTLIGIPIIT 181

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +    ++ ++ +++           I     A       +    LSAF    A  G+AG 
Sbjct: 182 IIAVVITVAVAMFMSSVRSGRDLYAIGSEPDAARLFGIPVGGRVLSAFIACGALTGLAGV 241

Query: 248 FFAASRDRI-----SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
            +A+  + +     S         ++V  + I GG  +++  A    +L  +        
Sbjct: 242 LYASRYNSVGALTGSGIELDVVAAVVVGGVAIFGGSGTVAGAAIGAVLLSTITGALTATR 301

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F                
Sbjct: 302 VDKFWQQAIVGVLILAAIII 321


>gi|301632066|ref|XP_002945112.1| PREDICTED: xylose transport system permease protein xylH-like
           [Xenopus (Silurana) tropicalis]
          Length = 318

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 91/284 (32%), Gaps = 30/284 (10%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           +         S     ++  QI +  + A+G ++++   GL+ L+     A+     V+ 
Sbjct: 4   ISSAISPVFFSVDNFSNISRQISVPTILAFGQTLLI-ICGLIDLSAGSVMALAGLLAVMF 62

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
               G     L   +  +  A G+  G  +      +   A +    +          +T
Sbjct: 63  YKATG-----LFYCAMGVGIAVGVACGYVNGFVVTRFGTPAFIATLAMMTVARGAALLLT 117

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
           NG+    + D   +                 F+     + ++LL        +      T
Sbjct: 118 NGQNVYQIGDFKEWGQ-------------GFFLGLPTPVIFLLLVTAMTWYVL----NHT 160

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            +      +  N++A  +    +   KL AF ++ A +G+AG  + +  +          
Sbjct: 161 RLGRYIYAVGGNEEAARASGVRVNSIKLKAFLLNGALVGLAGVLYMSRVN-AGLPNAGIG 219

Query: 265 ENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMN 302
                ++  I+      GG+ +         I+  +  +   +N
Sbjct: 220 FEFDAMTAAIIGGTSFSGGIGTAIGTLAGAFIMGFLGNIMNLLN 263


>gi|297624577|ref|YP_003706011.1| inner-membrane translocator [Truepera radiovictrix DSM 17093]
 gi|297165757|gb|ADI15468.1| inner-membrane translocator [Truepera radiovictrix DSM 17093]
          Length = 301

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 104/306 (33%), Gaps = 16/306 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G  ++  S  +++       AIGA++   L    GL+IWL + +
Sbjct: 8   LLTGVAVGCIYALAALGFVLIYKSSRVINFAHGELIAIGAFAVFGLTVWAGLNIWLALAL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +    G  +    L+       I+ ++++    ++L                     
Sbjct: 68  ALALMFFLGRGIERLFLRPMVGEPIISVIMVTIGLASLLSGLVYF------TPFGTLTAR 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +  +   F      +I        +L      A ++ + +R+ +  A R + D+Q 
Sbjct: 122 YPNFLPQVPLRFNVAGGTLILRWEQALAILFTLVFIALLMWFFKRSTLGIAMRAVADDQL 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+  ++      A+A +      AG                 +  + V   VILGG+
Sbjct: 182 ASLSVGVSVERVFGLAWAAAGLSATAAGFIVGGLYGL--EFSGLTAVGLRVFPAVILGGL 239

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++       ++  + +L  G    Y                    I L L++L++ H 
Sbjct: 240 DSIAGAVVGGILIGVLEQLSSGYLDTYVPG--------GGTGEVFPFIVLLLILLIKPHG 291

Query: 339 LLRLRT 344
           L     
Sbjct: 292 LFGTEE 297


>gi|254487205|ref|ZP_05100410.1| ABC transporter permease protein [Roseobacter sp. GAI101]
 gi|214044074|gb|EEB84712.1| ABC transporter permease protein [Roseobacter sp. GAI101]
          Length = 308

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 101/307 (32%), Gaps = 15/307 (4%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     ++  + A GL++V G +G ++L   + Y +GAY            ++ +    
Sbjct: 11  LNGLQYGMLLFLIAAGLTLVFGVMGFINLAHGVQYMVGAYLA----------VFYVGLTG 60

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           + I+     +          ++     L        +L  +  I        V      L
Sbjct: 61  SFIAAVFLSLGTALVFGLLLEHFIFRHLYTRSHLDQVLATFGIIIFLNELAKVLFGPATL 120

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                  +      +  + Y ++    +L    ++A++ L +  T I    R      + 
Sbjct: 121 SIAPPDFLSGSIQLTEQLRYPVYRAATILAGLLVAAALFLTVSYTRIGMLIRAGATTPEM 180

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   I    +  F V +   G AG   A             +  II   ++I+GG+ 
Sbjct: 181 VSALGVDIQRLFMIVFGVGAMLAGFAGVIAAPIFGI--EPGMGDNILIIAFVVIIIGGIG 238

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMRS 336
           S+     A  ++  +  L   +      ++     +        + L+ I +  +++ R 
Sbjct: 239 SIGGAFVAALLVGLIDTLGRSLATTLLTAVFSPSFANQVGPALASMLIYILMATILIFRP 298

Query: 337 HSLLRLR 343
             LL  +
Sbjct: 299 KGLLPAK 305


>gi|309389394|gb|ADO77274.1| ribose ABC transporter membrane protein [Halanaerobium praevalens
           DSM 2228]
          Length = 319

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 93/300 (31%), Gaps = 26/300 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
                  +   + ++  Q+ +  + ++G+++V+   G + L+     A        +   
Sbjct: 34  FMSPYFLTVPNLLNIVRQVSVIAIISFGMTMVI-LTGGIDLSVGSMLAFSGAIAAGMMVN 92

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
            GL+++L I V        G+  G+   K +     +   +M+      LI         
Sbjct: 93  SGLNVFLAILVGLAAGTVLGLFNGIAVAKAKLPAFIVTLAMMTIARGFTLI--------- 143

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                        +          F      Y + +   ++ M  L   I + L++T + 
Sbjct: 144 -----------YTSGRPISGFNDTFRFFGAGYLVKIPIPVVIMFILLFVIFILLKKTPLG 192

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                I  N+KA           K++ + ++      +G    +  +   P   +  E  
Sbjct: 193 RYIYAIGGNEKATRLSGINTDKIKIAVYGLNGFLAAASGIILTSRLNSAQPMAGEGYELD 252

Query: 268 IVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V     + GG   +        I+  +      +N   F  L+       +    
Sbjct: 253 AIAAVVLGGTSLSGGRGGVIGTIIGALIIAVLNNGLNLLNVSSFYQLVAKGAVILLAVFL 312


>gi|290956410|ref|YP_003487592.1| ABC transporter transmembrane protein [Streptomyces scabiei 87.22]
 gi|260645936|emb|CBG69027.1| probable ABC transport protein, membrane component [Streptomyces
           scabiei 87.22]
          Length = 358

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 98/320 (30%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +    + A+   +  F    + +    + ++  Q  +  + A  +++++   G   
Sbjct: 36  LARPEVGALIAAIGVYIFFFSVAPSFREASSLATVLYQASVMGIMAIPVALLM-IGGEFD 94

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A    A +  IL  +  +++W  + V+ ++S A G   G   ++       + TL
Sbjct: 95  LSAGVAVTTSALTAAILSFQLTVNVWTGVIVALIVSLAVGAFNGWLLIRTGLPSF-LVTL 153

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I Q   +    I  G         +                    V   +F +   
Sbjct: 154 GSFLILQGSNLAVTKIFTGNVASDSISDMDGFDQAKSVFASEVGIGGVEVKVTVFYWLAF 213

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +            RT   N    +  N+ +  ++   + F K++ F    A     G 
Sbjct: 214 AAIATWLLL------RTKFGNWIFAVGGNKDSARAVGVPVHFTKVALFMGVGAGAWFVGM 267

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
               S + +       +E + +I+ VI      GG  S         I   V +     N
Sbjct: 268 HLLFSFNTVQSGEGVGNEFLYIIAAVIGGCLLTGGYGSAVGPVIGAFIFGMVSQGIVYAN 327

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
           +              +    
Sbjct: 328 WNPDWFKAFLGVMLLIAALV 347


>gi|221633378|ref|YP_002522603.1| ABC-transporter [Thermomicrobium roseum DSM 5159]
 gi|221156988|gb|ACM06115.1| ABC-transporter [Thermomicrobium roseum DSM 5159]
          Length = 287

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 89/309 (28%), Gaps = 28/309 (9%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
            +   +        +  + A GLS+V G +  ++L     Y IG Y    +    G  + 
Sbjct: 3   VNTASLVIGLSYASLLFLVAVGLSVVFGLMRFINLATGSLYLIGGYIGWSVARSTGNFLL 62

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
            L+  +         I      +     L    L +      ++        G   + + 
Sbjct: 63  ALVAGALAALVVGIAIERGFLQRLHRKELLQVALTL--GVAYVVQDVTRWIWGGDPLRLR 120

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                 G+                +  I+   +++    L+  +   L RT      R  
Sbjct: 121 PPAMLRGSM----------ELFGSVVPIYRVALIVIGAVLAILVWYLLERTKWGAYVRAG 170

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            D+ +    L   +       F++ +   G+ GA                   ++ + +V
Sbjct: 171 VDDLEMVQCLGINVRRIFAIVFSLGALLSGLGGALGTPVTGVAPGTD--IQLQLMALIVV 228

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ILGG+ S+     A+ ++     +                  +       +     +V++
Sbjct: 229 ILGGLGSVLGAIAASIVVALTDTIVRTF--------------WPEASFFAVWALAAVVLI 274

Query: 334 MRSHSLLRL 342
           +R   L   
Sbjct: 275 VRPQGLFGR 283


>gi|300716428|ref|YP_003741231.1| sugar ABC transporter permease [Erwinia billingiae Eb661]
 gi|299062264|emb|CAX59381.1| Putative sugar ABC transporter, permease protein [Erwinia
           billingiae Eb661]
          Length = 355

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 84/312 (26%), Gaps = 10/312 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      + +    +   +  M   + I  + A G+++V+   G + L+      
Sbjct: 17  FIALLIVIGFFSVMVPNFLTPSNLLIMTQHVAITGLLAIGMTLVI-LTGGIDLSVGAVAG 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I       L +              +      + +    +      +     +   I   
Sbjct: 76  ICGMVAGALLTNGLPLWGGQTLFLNVPEVILVVTLFGIVVGLINGAVITRLGVAPFICTL 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            ++         A +   D   +        +    F        + +Y  +  M  L  
Sbjct: 136 GMMYVAR----GAALLWNDGSTYANLVGLPQLGNTGFAILGSGSILGVYIPIWMMVGLLL 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +   R+T +         N+ A       II  K+  +A S     + G   A+    
Sbjct: 192 VGLYITRKTPLGRYIYASGGNESAARLAGVPIIKVKVFVYAFSGMCAALVGLIVASQLQT 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + V     + GG   +S       +++ + +    M    F  ++
Sbjct: 252 AHPMTGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFLADGMVMMGVSDFWQMV 311

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 312 IKGLVIVTAVVI 323


>gi|154243898|ref|YP_001409471.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154163020|gb|ABS70235.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 315

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 97/303 (32%), Gaps = 15/303 (4%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG--AYSYVILGSRYGLSIWLLIPVSA 100
            +  ++Y + A G  ++  + G+ +        +   A    +      +  WL + ++ 
Sbjct: 21  LLSGILYALVALGFVLIFKASGVFNFAQGAMVLVAGLALVRALGWLETQVPFWLALMLAI 80

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
             SGA    +     +F    L      ++     I I +     G+           +G
Sbjct: 81  AFSGALMTGIAWAVERFALRKLVN-QTALTLFMATIGITFVLEGLGQQIFGAQVYKLDIG 139

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
               SL          ++      +  +    L  ++ ++ ++T +  A R + D+  A 
Sbjct: 140 LPRDSLFVLESVFDGGILLNQLDLWSAVLAALLVVALAVFFQKTQVGRALRAVADDHAAA 199

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            S+   +       + V+      A A + +    +          +  + ++I+GG+TS
Sbjct: 200 QSVGIPLTRVWFIVWMVAGFVAIAAAAVWGSK---VGVQFSLVYVALKALPVIIVGGLTS 256

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +        ++    +L            ++   ++ +    L+V         R   L 
Sbjct: 257 IPGAIVGGLLIGAGEKLAEVYLGPSVGGGIEHWFAYVVALLVLLV---------RPQGLF 307

Query: 341 RLR 343
             R
Sbjct: 308 GDR 310


>gi|170747855|ref|YP_001754115.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
 gi|170654377|gb|ACB23432.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
          Length = 297

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 86/301 (28%), Gaps = 24/301 (7%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y + A G  ++  + G+L+        + A ++V L  R       L    A +
Sbjct: 16  LLSGVMYALVAIGFVLIYKTSGVLNFAQGAMVLLAALTFVSLTERGLPFPAALAATLAAM 75

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 +                 +    +   I    +                     
Sbjct: 76  VVVGLAVERAVLRPLVNQPPITLFMATLGVAYVIEGAAQLAWG------------TQVHG 123

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   I         V+   F  +       + A +  + R T    A+R + D+  A  +
Sbjct: 124 LDLGIDDTPIDLGGVLVSRFDLFAAAVAGLMVALLSAFFRYTRTGLAFRAVADDPLAALN 183

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
               +     + +  +     +AG  + A               +  + +++LGG  S++
Sbjct: 184 TGLRLPRIWSAVWIAAGIVALVAGLLWGARLGVQFSLS---LVVLKALPVLVLGGFDSIA 240

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A  I+    +L            ++           +  +A    +L+R   L  L
Sbjct: 241 GAIVAGLIVGAAEKLSEVYLGPVIGGGIEGW---------IAYVAALGFLLVRPSGLFGL 291

Query: 343 R 343
           R
Sbjct: 292 R 292


>gi|163844977|ref|YP_001622632.1| hypothetical protein BSUIS_B0851 [Brucella suis ATCC 23445]
 gi|163675700|gb|ABY39810.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 346

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/313 (10%), Positives = 84/313 (26%), Gaps = 10/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +    +         +      M   + I+ + A G+ ++V   G + L+     
Sbjct: 31  AFFALIAIIAVFSFLSPYYFTVDNFLIMSSHVAIFGLLAIGM-LLVILNGGIDLSVGSTL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       L     L  + +I    + +           +      +    +    +  
Sbjct: 90  GLAGVVAGFLMQGVTLQEFGIILYFPVWAVVLITCALGAFVG----AVNGVLIAYLRVPA 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +             + + + L +     R  +    F          +   +L +  L+
Sbjct: 146 FVATLGVLYCARGVALLMTNGLTYNNLGGRPELGNTGFDWLGFNKLFGVPIGVLVLAILA 205

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L RTA          N++A       +   K+S + +S     +AG    +   
Sbjct: 206 IICAIVLNRTAFGRWLYASGGNERAAELSGVPVKRVKVSVYVISGICAAIAGLVLFSQLT 265

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG  ++        ++  + +    +    +   
Sbjct: 266 SAGPTAGTTYELTAIAAVVIGGAALTGGRGTIQGTLLGAFVIGFLSDGLVIIGVSSYWQT 325

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 326 VFTGAVIVLAVLL 338


>gi|218781638|ref|YP_002432956.1| branched-chain amino acid ABC transporter permease
           [Desulfatibacillum alkenivorans AK-01]
 gi|218763022|gb|ACL05488.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 294

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 104/303 (34%), Gaps = 23/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   IY + A G  I+    G+L+L       IGAY  +   +     I  ++  
Sbjct: 8   LITGILVGGIYALVALGWVIIYKCSGVLNLAMGELTLIGAYVTLSFYTAGVPFIPAVLLT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +   +   K  G+ + +A ++++      L        G         ++ 
Sbjct: 68  LVVGAALGYLTERIFLDKLIGEPI-LAVIMVTVGLSFFLKGLVEFLWGTDTRVFTPPVFS 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +               SF+       +  +    L   ++ + + T+   + +   D++ 
Sbjct: 127 IEP----------ITLSFLKISPVYLWSFILSIVLLVLLVSFFKFTSWGLSMQATADDET 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL  +  F   +++A++    G+ GA           ++      ++V+  V+LGG+
Sbjct: 177 AALSLGVSARFVYAASWAIAFMSAGVGGALLGNIN---GINISVGHLGLLVLPAVVLGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +  +  L       YF   +            +  + + + +L + + 
Sbjct: 234 NSIPGAIVGGITIGVLQNLAGTYLDVYFPGGV---------KEIVPFVFMTVFLLFKPYG 284

Query: 339 LLR 341
           L  
Sbjct: 285 LWG 287


>gi|161524885|ref|YP_001579897.1| monosaccharide-transporting ATPase [Burkholderia multivorans ATCC
           17616]
 gi|189350365|ref|YP_001945993.1| simple sugar transporter permease [Burkholderia multivorans ATCC
           17616]
 gi|160342314|gb|ABX15400.1| Monosaccharide-transporting ATPase [Burkholderia multivorans ATCC
           17616]
 gi|189334387|dbj|BAG43457.1| simple sugar transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 345

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 94/311 (30%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +V  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 46  VLLVLCIGFGFLTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 104

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A + ++  +  G   WL +P + ++    G I G      R     +    M+ +     
Sbjct: 105 AVASLLASTIPGW-GWLGVPAALVVGLVFGAINGGLISLLRLPPFIVTLGAMTAVRGVAR 163

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    LG           F          + ++++  C + A  
Sbjct: 164 L--------------------LGNDTTVFNPQLPFAFIGNGTIFGVPWLVVIACAVIAIS 203

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   +L  +A S    G+     AA     +
Sbjct: 204 WFILRRTVLGMRIYSVGGNPEAARLSGINVRAIQLFVYAASGLLAGLGAVMSAARLYAAN 263

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 264 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLTNGLVLLGVSDIWQYII 323

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 324 KGLVIIGAVAL 334


>gi|254426026|ref|ZP_05039743.1| amino acid or sugar ABC transport system, permease protein,
           putative [Synechococcus sp. PCC 7335]
 gi|196188449|gb|EDX83414.1| amino acid or sugar ABC transport system, permease protein,
           putative [Synechococcus sp. PCC 7335]
          Length = 275

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 94/295 (31%), Gaps = 26/295 (8%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           +Y + A G  I       ++ +      +GA     L   +G++  + +P++ ++    G
Sbjct: 1   MYGLVALGFQITYAVSNTMNFSQGAVVMVGAVVCYCLNITWGVNAVIAVPLTLILCAIFG 60

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +++    ++      + + L+ +     I      +T G                  S++
Sbjct: 61  LLIERWVVRPFARNGSQSWLLSTIALGIITENIAMLTFG-----------KEVRGYPSVL 109

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                             + +     + ++ L   RT    A+R   +N      L   +
Sbjct: 110 AETPVSILNFGVYPLELVIPVVGLASAIALRLLFTRTLWGKAFRAASENPDTARLLGVPV 169

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
            +    +F++S+   G+AG   A   +            +   +  ++GG+++   +  A
Sbjct: 170 TWLIALSFSLSTMLAGLAGMLIAPIANV--SATMGTLLGVKAFATAMIGGLSNPWGVMLA 227

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             +   V  +  G                      +  + +  V+ +R + L   
Sbjct: 228 GVMYGIVESVAAGTLG-------------GSYREIVGFLVVIAVLSVRPNGLFGR 269


>gi|209550984|ref|YP_002282901.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209536740|gb|ACI56675.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 334

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 86/313 (27%), Gaps = 17/313 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  ++  L          + ++  +     + A G + V+ S G L L+     A
Sbjct: 26  FVALALLLIVGALVNPNFIGITNLANVATRSAFIAIIAVGATFVI-SAGDLDLSVGSMVA 84

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             A   ++L +   +    L+   A++       +   +         I   I +     
Sbjct: 85  FVASLMILLMNSGAIENPALMLTVAVVFTLVAGALCGLANGLITTVGKIEPFIATLGTMG 144

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I                         T+RS      +  ++      +   ++ +  ++A
Sbjct: 145 IYRGLTTW-----------LSQGGAITLRSADIQTLYRPAYFGTIAGVPIPIVVILAVTA 193

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L RT        +  N          +   +  AF +    + +A   +      
Sbjct: 194 VAAFILYRTRYGRHVVAVGSNSDVARYSGIAVNRVRTIAFVIQGLCVAIAVLLYVPRLGS 253

Query: 256 ISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            S       E   + ++V+      GG   +        IL  V  +    NF     + 
Sbjct: 254 TSATTGILWELQAITAVVVGGTALKGGAGRVWGTICGAFILELVGNIMLLSNFISEYLIG 313

Query: 311 KFDCSFNMRHTTL 323
               +  +    +
Sbjct: 314 AIQGAIIIIAMFV 326


>gi|114761047|ref|ZP_01440962.1| putative ABC transporter, permease protein [Pelagibaca bermudensis
           HTCC2601]
 gi|114545295|gb|EAU48297.1| putative ABC transporter, permease protein [Roseovarius sp.
           HTCC2601]
          Length = 289

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 87/301 (28%), Gaps = 26/301 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
             Q +IY + A  L++V  S  +++         GA+   +L    G++      ++ + 
Sbjct: 10  LSQGMIYALIALSLTVVYRSTTVVNFGHGDFVMAGAFLSYVLVVLAGVAFLPAAALAMIA 69

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G++     ++       I   +M      +L     +  G+  + +          
Sbjct: 70  MFVLGVMFNRGLIRPIRGGPHIGLALMCIAAGYLLRGIARMVWGREVLPMPPVFDMAPIF 129

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           V             ++      +++  +  L       +  T +    + +  + +    
Sbjct: 130 V-----------GDLVITGDAVFIIGTVLVLLLLFFGLMALTDLGKMVQAVYQSPRGARL 178

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +      ++ V +A   + G   A     +       S  I   + + LGG  SL 
Sbjct: 179 IGLNVDRFNDFSWGVGAALGALGGILVAPV--SLLHPDLGASFLIKGFAAMTLGGFGSLG 236

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  +L    +            +                + +  V+ +R   L   
Sbjct: 237 GAVLGGVLLGIAEQYAGAYLDTALIEITA-------------YVVIVAVLFIRPQGLFGR 283

Query: 343 R 343
           +
Sbjct: 284 K 284


>gi|307729890|ref|YP_003907114.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|307584425|gb|ADN57823.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
          Length = 355

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 94/293 (32%), Gaps = 27/293 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +   +L  L      +     ++  QI   V+ + G++ V+   G + L+     
Sbjct: 55  LAGALLGMIVLFSLLSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAG-IDLSVGSVL 113

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GA    +   ++G        +    +   G I G  ++ +R     ++  ++     
Sbjct: 114 ALGASVVSVAALKWGWGPLPSALLGVAAAALTGTITGAVTVGWRIPSFIVSLGVLEA--- 170

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                             A  L +  T  R+      F        + +    L    + 
Sbjct: 171 ------------------ARGLAYQMTNSRTAYIGDAFDFLSNPIALGISPAFLIAVAVM 212

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L RT        I  N++A           K+  FA+  A  G+A  F  +  +
Sbjct: 213 VIAQLVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKVIVFALMGALAGLASLFQISRLE 272

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
              P+    +E  ++ ++VI     +GG  S+        I+  +      + 
Sbjct: 273 AADPNAGVGAELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIG 325


>gi|296127344|ref|YP_003634596.1| inner-membrane translocator [Brachyspira murdochii DSM 12563]
 gi|296019160|gb|ADG72397.1| inner-membrane translocator [Brachyspira murdochii DSM 12563]
          Length = 340

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 81/269 (30%), Gaps = 6/269 (2%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            +        ++  Q    ++ A G+  ++ + G   L    A  + A     L      
Sbjct: 36  PSFFKLSNFLNIFAQASTRMIIAVGVGTLLVTQGN-DLGAGRAVGLAAVVSASLLQSPSN 94

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              +   +  +      +++ L  + F      I + +    F   L     +    +  
Sbjct: 95  PTRMYPDLPMLPVILPILLVMLILMVFGFLNGFIISKLYVTPFIATLGMQLILYGVTSTY 154

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
           +                          +    + Y+++    ++A + +   +T +    
Sbjct: 155 FDRPPYGAQPIGGLDPRFSNLAQGGIKLGSYTISYLIIFAVIITAIMWVVWNKTKLGKNI 214

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N +A       I    +  + +S A  G+AG+   A     + ++    E   + 
Sbjct: 215 FAVGGNPEAAAVSGVNIPLTLMIVYTMSGALYGIAGSLEVARVGSATNNLGNGYELDAIA 274

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGV 294
           + V+      GG+ S+  I     I   +
Sbjct: 275 ACVVGGVSFSGGIGSILGIVSGVLIFQVI 303


>gi|218663012|ref|ZP_03518942.1| putative permease component of ABC transporter [Rhizobium etli
           IE4771]
          Length = 324

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 2/128 (1%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I    Y + + GL+I+ G L +++      Y +GA+   +L +  G+  W  + ++ +I
Sbjct: 4   LINGSFYALLSLGLAIIFGLLRVINFAHGAQYMLGAFVAYLLLTYAGIGYWPSLILAPVI 63

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
            G  G I+       R  Y       +          WK       G          G  
Sbjct: 64  VGLAGAIIERL--FLRRLYDLDPLYGLLFHPSGWRSPWKGTFRYLYGSSGQPYATPGGAR 121

Query: 163 VRSLIRFF 170
            R   R  
Sbjct: 122 RRGQSRLH 129


>gi|121605498|ref|YP_982827.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120594467|gb|ABM37906.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Polaromonas naphthalenivorans CJ2]
          Length = 317

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 98/309 (31%), Gaps = 23/309 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++  +          + +    +  Q+++  + A G ++++ + G + L+C +  A
Sbjct: 15  FIALLLACVFFATQNERFLTLQNFSLIMQQVMVVGVIAIGQTLIILTAG-IDLSCGMVMA 73

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +G      L + +GL   + I     ++   G+I GL   + +     +    ++  F  
Sbjct: 74  LGGIVMTKLSADFGLPTPVAIACGMAVTMLFGLINGLLVTRIKLPPFIVTLGTLNIAFAI 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             +                      T            ++F I    M Y ++ M  L  
Sbjct: 134 TQLY-----------------SQSQTVTDIPAGMTFLGNTFTIGNTSMGYGVVLMLALYV 176

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +  LWLR TA       + ++ +A            L  + ++  F G+A     A    
Sbjct: 177 ATWLWLRETAPGRHIYAVGNSPEATRLTGIATDRVLLGVYVLAGLFYGIASLLSVARTGA 236

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P+  +      + ++V     + GG   L        I+         M       +L
Sbjct: 237 GDPNAGQTENLDAITAVVLGGTSLFGGRGMLLGTLVGALIVGVFRNGLTLMGVSSVYQVL 296

Query: 311 KFDCSFNMR 319
                  + 
Sbjct: 297 VTGILVILA 305


>gi|163846660|ref|YP_001634704.1| inner-membrane translocator [Chloroflexus aurantiacus J-10-fl]
 gi|222524462|ref|YP_002568933.1| inner-membrane translocator [Chloroflexus sp. Y-400-fl]
 gi|163667949|gb|ABY34315.1| inner-membrane translocator [Chloroflexus aurantiacus J-10-fl]
 gi|222448341|gb|ACM52607.1| inner-membrane translocator [Chloroflexus sp. Y-400-fl]
          Length = 293

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 107/304 (35%), Gaps = 24/304 (7%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            S      I+ + A G  ++  S  +++        IGAY    +  ++GL     + ++
Sbjct: 9   LSGIANGAIFALVALGFVLIYKSSDVINFAQGELLLIGAYLTYAMVEQFGLWWPAGVVLA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++   G+++    L+      AI+ ++++    ++L        G         L   
Sbjct: 69  VVLAAVAGVLIEQLVLRPMIGEPAISVIMVTIGLSSLLRAIVGAIWGVTPRPAPQFLPTD 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
             T+                 +   +       L   + L+ R +    A R + D+Q+A
Sbjct: 129 TVTILG-----------ANVGVDRIWAFGLAITLFVILTLFFRYSRDGIAMRAVADDQQA 177

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             S+  ++      A+A+++    + G    +    +S  + +     IV  +VILGG+ 
Sbjct: 178 ALSMGISVKKVWAVAWAIAAITAAVGGILLMSIFGGVSGTIARVGL--IVFPVVILGGLD 235

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        I+  +     G     +                +  I L  ++L+R + L
Sbjct: 236 SIPGAIIGGLIIGLLQSFAGGYLPPEWGVGE-----------VVPFIILLFILLVRPYGL 284

Query: 340 LRLR 343
              R
Sbjct: 285 FGQR 288


>gi|332798718|ref|YP_004460217.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp.
           Re1]
 gi|332696453|gb|AEE90910.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter
           sp. Re1]
          Length = 337

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/314 (10%), Positives = 99/314 (31%), Gaps = 20/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             L  ++  ++         +   I ++ +Q  +  + A G+S+V+ S GL+ ++     
Sbjct: 28  FILSFILLVIIAASVNKNFFTWTNISNIFVQSSMVGLIAMGMSMVI-SAGLIDISVGSQV 86

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A      +++ +  G    +L+    ++ G     +    +   G    IAT+ M    +
Sbjct: 87  AFIGSFGILVLNNTGSIFIMLLF--CIVVGFILGGLNGLMVTKGGIPAMIATMAMQSACR 144

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           +I+  +                + +       +R       ++  +  + Y+++  C   
Sbjct: 145 SIINHFGS-----------GGPFTVNKEYYESLRMLAVGGIYITPKFKIPYLMIIFCAAG 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + ++ T        +  N+ +       +   K   F V+    G+    +A+   
Sbjct: 194 IIFDIIMKHTKFGKYIYAVGSNETSARLSGINVDLVKACTFIVTGIMCGITSLIYASRTT 253

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            ++         +  I+ V +GG         +        +   +  +    +   + +
Sbjct: 254 AVAAASAATGFEMDAIAAVAIGGTSMSGGKGKIIGTFIGVLMFKMISNILTAADVSTYLN 313

Query: 309 LLKFDCSFNMRHTT 322
                    +    
Sbjct: 314 GAISAAIIVIAVLM 327


>gi|307298149|ref|ZP_07577953.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916235|gb|EFN46618.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 324

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/313 (10%), Positives = 86/313 (27%), Gaps = 18/313 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  ++  +        + + ++  Q+    + A G++ V+   G + L+     A
Sbjct: 18  LIALAILFVISAIASPYFLQTQNLLNILRQVSYTGIIALGMTFVI-ISGGIDLSVGSMVA 76

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +               + L +     + G  G    +      G         ++ +   
Sbjct: 77  LVG-----------GVVILALNWLLTVFGEGGEAWAILFALIIGLLFGAGLGALNGLMVT 125

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I      I              ++G+          FP   +   + +   ++    L+ 
Sbjct: 126 IGKIAPFIATLGTMAIFRSMALYIGSAGVFRSESNLFPDLGMGNVLGIPNPVVVFISLAV 185

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              + L +T        +  N K        +   +  ++      +G +  F +A  + 
Sbjct: 186 IFAIILNKTRYGRYLCAVGSNPKVAKYSAIKVNLTRFISYVAVGITVGFSAVFLSARLNS 245

Query: 256 ISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           +S      +  +  I+ VI+      GG  S+         L  +  +   +    +   
Sbjct: 246 MSSTNGGLNYELDAIAAVIIGGTPMTGGAGSIFGTVIGAITLGIINNMLNMLGVSPYLQG 305

Query: 310 LKFDCSFNMRHTT 322
                        
Sbjct: 306 TVKGVVIIGAVLI 318


>gi|239814589|ref|YP_002943499.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239801166|gb|ACS18233.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 286

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 104/297 (35%), Gaps = 27/297 (9%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           ++Y + A GLSIV G L  ++      Y +GAY       ++GL  W  + +  +  GA 
Sbjct: 16  MLYFLLAVGLSIVFGLLRFVNFAHGAFYLLGAYLC-FQAMQWGLDFWAALVLVPLFVGAL 74

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G +     L+          ++++      + +   +  G  G  VA      G      
Sbjct: 75  GWLAEKLLLRRVYAKAHEFHILVTVGLALAVQEIVIVFWGPLGNSVATPDLLQGV----- 129

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                      IY  +  +V+     L+  +   L  T + +A R   ++ +    L   
Sbjct: 130 -----VMWGSFIYPKYRLFVIGFTAVLAVLLWWVLEGTRLGSAVRAGSESTEMVSLLGIN 184

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +       FA+ +A   +AG   A  R              +   +V++GG+ S      
Sbjct: 185 VFRVFSLVFALGAATAALAGVLAAPIRGA--EPFMGVEALSVAFVVVVIGGLGSFGGALV 242

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
              ++  V  L   +     +               ++ +A+  V+L+R H LL  R
Sbjct: 243 GGLLIGIVQSLMSTIWPPGAS--------------LMIYVAMGAVLLLRPHGLLGRR 285


>gi|107022809|ref|YP_621136.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054]
 gi|116686951|ref|YP_840198.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
 gi|105892998|gb|ABF76163.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia cenocepacia AU 1054]
 gi|116652666|gb|ABK13305.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia cenocepacia HI2424]
          Length = 353

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 88/302 (29%), Gaps = 12/302 (3%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            A  +   + S+   + I  +   G+++ +   G   L+     A    +   +   +  
Sbjct: 52  PAFLNLDNLFSILQAVSIVALLGIGVTVTLA-AGGFDLSVGSVAATAQMAASYVLVVWHG 110

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S W  +    ++  A G+  GL   + R     +ATL    +   + +      +   G 
Sbjct: 111 SAWAAVFACVVLGVAAGLFNGLLITRLR-VPDQLATLGTLFLLAGLQLIPTGGRSLATGS 169

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            + D      T    +          +     +   +L +  ++    + +  T      
Sbjct: 170 VLPDG-----TDATGVFPDAFLALGRLRVFDVVPLPVLLLAAVTVLACVTMEATRWGRVI 224

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR----DRISPDMFKFSEN 266
             I  N+ A           +++A+ VS A   + G   AA            +   +  
Sbjct: 225 YAIGGNETAARLAGAPAARYRIAAYVVSGAIASLGGVLIAARVGRGDVSAGHSLLLDAVA 284

Query: 267 IIVISIVILGGMT-SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
             +I   + G    ++         +  ++     +N  Y+           +       
Sbjct: 285 AALIGYAVWGAKRPNVFGTVVGAVFVGVLLNGLTMLNAPYYMQDFIKGVLLVLALAFTFG 344

Query: 326 IA 327
           I 
Sbjct: 345 IG 346


>gi|332297869|ref|YP_004439791.1| ABC-type transporter, integral membrane subunit [Treponema
           brennaborense DSM 12168]
 gi|332180972|gb|AEE16660.1| ABC-type transporter, integral membrane subunit [Treponema
           brennaborense DSM 12168]
          Length = 334

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 48/296 (16%), Positives = 83/296 (28%), Gaps = 23/296 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    VV   +  +      S + ++++  QI   ++   G S V+   G + L+     
Sbjct: 22  VAAGLVVLCAVFGILNPTFFSSRNMNNLLRQIAPILLIGIGQSYVL-ITGNIDLSIGSVV 80

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       L +      W+ + V+ +     G+  GL     +         I +    
Sbjct: 81  GMSTMISATLMTHGVD-PWIAVAVTFVCCILVGLANGLLVAGCKLPPF-----IATLGTM 134

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I      I NG                     + F   S+           +     L 
Sbjct: 135 TIARGIAQIANGNYNTDSIGPAAEGFRNFFYYGKVFGIFST-----------VWIAAVLW 183

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT        I  N +A      +I+   +  +AVS+    + G    AS  
Sbjct: 184 LLFNFLLARTRSGRHVYAIGSNPEAAKLSGISILSTTVKVYAVSAVCACVVGLTQCASAG 243

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
             + D     E   V + VI     LGG   L       AI   +           
Sbjct: 244 MGAMDAGNSYELYAVAASVIGGVSTLGGQGILLGTVIGAAIWGVLQNGLQFAGAPV 299


>gi|323487784|ref|ZP_08093042.1| inner-membrane translocator [Planococcus donghaensis MPA1U2]
 gi|323398518|gb|EGA91306.1| inner-membrane translocator [Planococcus donghaensis MPA1U2]
          Length = 345

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 87/316 (27%), Gaps = 13/316 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L V           A  +      +   I I  + A G++  +  +G   L+     
Sbjct: 29  AIALLVFIIFYFSTISDAFFTYDNFTDILRSISIVTLLALGVTFTL-VVGGFDLSVGSTM 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           +        L   Y + +WL++ +  +I    G+      +      L    L    +  
Sbjct: 88  SFSTVVSASLMVWYDMPLWLVLILPLLIGVLVGLFNSFLIVIIGIPDL----LATLSVMY 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +    +  T G +               +    F       ++      +++L M   S
Sbjct: 144 IVAGLHRTYTEGYSIYNNMPLTSGSTAPGQLSDAFLWIGQGQLMGLPVPVWIMLVMVTAS 203

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             ++     T           N +A       +   K +A+ VS  F  MAG  F A   
Sbjct: 204 YIVL---HHTRWGRILYMTGGNAEAATLSGVNVKKVKFTAYVVSGIFASMAGILFTARVG 260

Query: 255 RISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
               D         V ++     V+  G  +        A++  ++      N  Y+   
Sbjct: 261 SGQIDAGAPLMMEAVAAVFVGYSVLGAGKPNALGTFFGAAVIGILLNGLTIQNLPYYAFD 320

Query: 310 LKFDCSFNMRHTTLMV 325
           +              +
Sbjct: 321 IIKGSVLVAALAVTYI 336


>gi|312111216|ref|YP_003989532.1| inner-membrane translocator [Geobacillus sp. Y4.1MC1]
 gi|311216317|gb|ADP74921.1| inner-membrane translocator [Geobacillus sp. Y4.1MC1]
          Length = 392

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/359 (11%), Positives = 97/359 (27%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  L ++  +   L  G   S + + ++ +Q+ +  + A G+++V+   G + L+
Sbjct: 26  RSYTLVIALVLIALIFGVLTDGEFLSSRNLSNLFMQMSVISILAIGMTLVI-IAGHIDLS 84

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +      IL   YG     +I V+ ++    G+  G            +    M
Sbjct: 85  VGSVVGLTGGIAAILQVWYGWGTVSVIVVAIIVGALIGLWQGWWVSYRNVPAFIVTLGGM 144

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE--------- 180
                 ++      T                      +          ++          
Sbjct: 145 LIFRGILIGISNGETIAPLNKSFEAIGNSYLPYAVGYVLAIISIIMLFVFVNRNRKKRKL 204

Query: 181 --------------------------------IFMYYVLLGMCFLSASIILWLRRTAISN 208
                                             +   +L +  L+   +    +T    
Sbjct: 205 LGLTVHTKANDYGKAAIYSLCILVLVYMLNRYYGIPIPMLIVVLLAILFVFIAVKTPFGR 264

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N +A       I    L+ F +  A  G+AG    +  +  +    +  E   
Sbjct: 265 YIYAIGGNIEAAALSGINIKRVVLTIFVLMGALSGVAGIILTSRLNAATVSSGEMYELDA 324

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + VI     +GG  ++        I+  +      MN   F   +       +    
Sbjct: 325 IAACVIGGTSLMGGRGNIIGAMIGALIMASIDNGMSMMNIETFWQFIVKGLILIIAVWI 383


>gi|149178296|ref|ZP_01856888.1| ribose transport system permease protein RbsC [Planctomyces maris
           DSM 8797]
 gi|148842822|gb|EDL57193.1| ribose transport system permease protein RbsC [Planctomyces maris
           DSM 8797]
          Length = 335

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 93/313 (29%), Gaps = 26/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  +     L+  L      SQ+ + ++   I   ++ + G+++V+   G + L+     
Sbjct: 33  LLGVLAFLVLIFSLMSDHFLSQQTLVTVANNIPDLLVISVGMTLVLIIGG-IDLSVGSLL 91

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ +    +    +G  +W  +PV   +   CGM+ G+ S+K       +   ++     
Sbjct: 92  ALSSALLGVCMVDWGSPLWSAVPVCLGVGAVCGMLNGVISVKAGIPSFIVTLGMLEM--- 148

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                         G               S+         FV    F+  +++      
Sbjct: 149 ------------ARGSAYLITDSQTKYIGSSIEWIGVPLKGFVFSPAFLLALVIVAAGHY 196

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                   RT        I  N +A            ++ F +S    G+AG    +   
Sbjct: 197 LL-----TRTVFGRYCVAIGTNAEAVRMSGIRTAPYSVAVFTISGLLCGLAGVMQTSRLS 251

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E   + + VI     +GG  S+        I+  +      +        
Sbjct: 252 SADPNAAVGLELSAIAACVIGGTSLMGGRGSVINTFFGVLIIAVLQTGLAQIGATDPIKR 311

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 312 VITGAVIIVAVLL 324


>gi|293603203|ref|ZP_06685636.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292818434|gb|EFF77482.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 330

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 53/290 (18%), Positives = 108/290 (37%), Gaps = 23/290 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +  ++   +AV     L   L          S    +++++  A  ++I VG  G L   
Sbjct: 20  RAVRLRTRIAVTLFAALAAGLAVIPMASSNISFAFYLMLWITMASAMNICVGFTGYLPFG 79

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
            V+ Y +G+Y+  I          L   ++A  +G    ++  P+L+ RG Y  I +L +
Sbjct: 80  YVVFYGVGSYATGICYKI-MGWPILPSLLAAGGAGLAIAMLLAPTLRLRGVYFGIVSLAL 138

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           + I + ++        G +                          S        YY +L 
Sbjct: 139 ATIVKLVISDLPQSFTGGS---------------------MGIILSRANNPTHSYYAMLI 177

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   + + + WL  + +  A + IRD+  A   +   +   +L A+ +++ F  +AG   
Sbjct: 178 VMGATLATVTWLSVSRLGRALKAIRDDDGAAACVGIHVPNTRLKAWLLAALFPALAGGIE 237

Query: 250 AASRDRISPD-MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           A   + + P+  F        I   + GG  ++      T  L+G+  + 
Sbjct: 238 AWYTNVVDPEYAFNVLITAKSIIYAMAGGFGTILGPVVGTLALVGIDHMI 287


>gi|238795744|ref|ZP_04639258.1| Monosaccharide-transporting ATPase [Yersinia mollaretii ATCC 43969]
 gi|238720470|gb|EEQ12272.1| Monosaccharide-transporting ATPase [Yersinia mollaretii ATCC 43969]
          Length = 335

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 107/317 (33%), Gaps = 18/317 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L +++ +L    ++    L        +   I  +     +  + A GL IV+   G + 
Sbjct: 18  LKRHEVMLAFTILIISTYLAFTSPDFLTLANIYDLINNYAMLTILACGLFIVL-ISGGID 76

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++      I  Y  V L  ++G +  +   ++  I    G+I  L   + R   + I   
Sbjct: 77  ISFPAMTIISQYVMVTLIVKFGGNFPVAFALAGGIGLLLGLINALLVNRLRVPSIIITIS 136

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++  +  +L   + +       +          T                Y+  +   +
Sbjct: 137 TLNIFYGLLLYLSRGVWLYTYPEWFEHGPMIFSFTAAD------------GYDYGLSLPI 184

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +        L + RT+I      +  NQ+A   +  +I+  +L  +       G+AG 
Sbjct: 185 LTLLITIIVTALLMTRTSIGRQIYALGGNQEAASRMGFSILKLQLFVYGYMGFLSGIAGV 244

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
             + +   ++PD     E  ++ ++V     I+GG  +L+       +L  +      + 
Sbjct: 245 VQSYTVLTVAPDSLLGYELTVLAAVVLGGTSIVGGRGTLTGTLLGVILLAILQNGLNLLG 304

Query: 303 FYYFNSLLKFDCSFNMR 319
              +   +       + 
Sbjct: 305 ISSYWHTVVIGLVIVIS 321


>gi|149010624|ref|ZP_01831995.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP19-BS75]
 gi|147765105|gb|EDK72034.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae SP19-BS75]
          Length = 242

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 2/159 (1%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L+ + +       +   +  QI I ++ A GL+++VG  G  SL      AIGAY+  I+
Sbjct: 21  LISVLVSVGVLNLFYVQILQQIGINIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAAAII 80

Query: 85  G--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           G  S    + +  + V A++SGA  +++G+P+L+ +GDYLA+ATL +SEI +  +I    
Sbjct: 81  GSKSPTYGAFFGAMLVGALLSGAVALLVGIPTLRLKGDYLAVATLGVSEIIRIFIINGGS 140

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           +TNG AGI               ++       +F+   I
Sbjct: 141 LTNGAAGILGIPNFTTWQMVYFFVVITTIATLNFLRSPI 179


>gi|160896233|ref|YP_001561815.1| monosaccharide-transporting ATPase [Delftia acidovorans SPH-1]
 gi|160361817|gb|ABX33430.1| Monosaccharide-transporting ATPase [Delftia acidovorans SPH-1]
          Length = 344

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 90/314 (28%), Gaps = 17/314 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+     L L      LL         +      +     +  + A GL +VV   G + 
Sbjct: 9   LHHPVARLGLAIAAMALLFGALAPGFWTLGNWMDVAEGASVTAIMAVGL-LVVLVAGGID 67

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++      +  Y   +  +R G +    I +      A G    L   + R         
Sbjct: 68  ISFAATATVAQYLAALAATRLGWAPAASIALGLATGLALGAFNALLIHRLRAT------- 120

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +      + + +  + +G  G  + D            +   RF S+     + +   +
Sbjct: 121 SIIITISTLNLYFALLMHGTGGRSIYDLPS----WWSDSVVLARFASADGADPVRLTLPI 176

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                 +    L L  +A+         N +A   +   +   +  A+        +AG 
Sbjct: 177 AVAGAAAVLTALLLGHSALGRRLYAFGGNPEAAHRMGIGLGAIQGVAYGWLGMMAAIAGL 236

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
             A       P+    +E  ++ + V     + GG  S+  +     +L  +      M 
Sbjct: 237 VQAHRVGESVPNALVGTELFVLAAAVLGGASLFGGTGSVGGVLMGVLLLAVLRNGLNLMG 296

Query: 303 FYYFNSLLKFDCSF 316
              +   +      
Sbjct: 297 VSPYFFQVLLGAVV 310


>gi|237732518|ref|ZP_04562999.1| monosaccharide-transporting ATPase [Citrobacter sp. 30_2]
 gi|226908057|gb|EEH93975.1| monosaccharide-transporting ATPase [Citrobacter sp. 30_2]
          Length = 329

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 99/303 (32%), Gaps = 20/303 (6%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +++  L LL V   + L +      S   +  +     I  + A GL  VV   G + ++
Sbjct: 12  QHEFWLGLLVVALAVGLSISTDEFLSLGNLTDVATSYAILGILACGL-FVVLISGGIDIS 70

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                AI  Y+       +G +  L + ++  +    G+I G      R   + I    +
Sbjct: 71  FPAMTAIAQYAMASWVIGHGGNFALALIIAIAVGLLLGLINGFLVYWLRVPAIIITIATL 130

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +  +  ++   K         +  + + +   T                Y+  +   LL 
Sbjct: 131 NVYYGLLVYATKGTWLYGFPDWFMNGINWFSFTAAD------------GYDYGLTLPLLC 178

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  +     + +  T +      +  N+ A   L   ++      +       G+A    
Sbjct: 179 LAAVIIFTAVLMNYTRLGRQVYAMGGNRDAASRLGLNLLKLHFYVYGYMGILAGVAAVVQ 238

Query: 250 AASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNF 303
           A     ++P+       + V++ V+L      GG  +L+       +L  +      ++ 
Sbjct: 239 AQITQSVAPNSL-LGFELTVLAAVVLGGTSMSGGRGTLTGTLLGVVLLAFLQNGLTLLSV 297

Query: 304 YYF 306
             +
Sbjct: 298 SSY 300


>gi|255305331|ref|ZP_05349503.1| ribose ABC transporter, permease protein [Clostridium difficile
           ATCC 43255]
          Length = 332

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 96/280 (34%), Gaps = 26/280 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +      +  V+  +++ +      +   + ++G QI I  + A G++ V+   G + L+
Sbjct: 24  RDQGSAAVGLVIIFIIMSVASSNFLTLDNLINVGRQISINAILAVGMTFVI-ITGGIDLS 82

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+    +      Y   IW+ + ++  I    G+I G      +           
Sbjct: 83  VGAVIALVGTFWATTVVNYNAPIWVGMILALAIGTILGVIKGAIISTQKLPPF------- 135

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 + +    I +G + ++   R           +    F      Y   +   ++ 
Sbjct: 136 -----IVTLAMLTIISGASFVFTGGRPI--------SVNTDAFKMLGRGYIGPIPIPVII 182

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           M  +  +    L+RT        +  N++A       +    +  +A++     +AG   
Sbjct: 183 MIIVVIAGHFLLKRTNFGRHVHAVGGNEEAARLCGVKVNKVIVKVYALAGLLTALAGIIL 242

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKI 284
           ++     SP +   +E   + ++V     ++GG  S+   
Sbjct: 243 SSRLASGSPTVGDGAELDAIAAVVLGGTNMMGGSGSIVGT 282


>gi|86748683|ref|YP_485179.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86571711|gb|ABD06268.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 297

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 101/306 (33%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A    ++  +  +++        IGA+    L ++Y +  ++ +P+
Sbjct: 10  LVNGLVVGTLYGVVAMSFVLIYKATQVVNFAQGELLLIGAWVCWALLAKYQVPFYVGMPL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +   A G+ + +  L+       I+ ++++     +         G            
Sbjct: 70  TLVFMFAFGIAIQIIVLRPMIGEPIISVIMVTIALSTVFQATLKWIFGVNPQPFPQIFTT 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +                 +      L+    +   +  + + +    A R    NQ+
Sbjct: 130 QSVSFAGFQ-----------LQTVYVMSLVVSVAMMIGMAWFFKVSKYGLAMRATAFNQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  ++      A+A+S+    +AG   A      S         I V    ILGG+
Sbjct: 179 VAQSLGISVKSVFAMAWAISATVSAVAGVVVAVVNGVSSGLSAY---GIKVFPAAILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +  L   ++  Y +            +       L ++++++ + 
Sbjct: 236 DSIGGAVLGGIIIGLLENLAQYIDSEYLHW--------GNLYEIAPFYVLIIILMIKPYG 287

Query: 339 LLRLRT 344
           L   + 
Sbjct: 288 LFGTKD 293


>gi|254194530|ref|ZP_04900961.1| ABC transporter, permease protein [Burkholderia pseudomallei S13]
 gi|169651280|gb|EDS83973.1| ABC transporter, permease protein [Burkholderia pseudomallei S13]
          Length = 349

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 59/327 (18%), Positives = 114/327 (34%), Gaps = 23/327 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+A +  L     +    +  Y        L   + A G++++   LGL+ L+     
Sbjct: 25  LALVATLGTLAAIALVVPAVADAYWIKTLTSALTVSIAAAGVALLYRQLGLVCLSQHALL 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G +   +  +  G    L +   A    A GMI GLP+L+ RG YLA+ TL+M+  FQ
Sbjct: 85  GVGGWI-ALRLAHLGAPFELCVLAGAAGGSAIGMIAGLPALRLRGLYLALVTLMMAGGFQ 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++        G                +    R           +   +  +     L+
Sbjct: 144 VVVSAIGFPDGGGG----------FTGHLSFGARQMMARPLVGQSDAAYFRYVAAWAALA 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++I   RR+    +W  IR  +         ++  +  AF ++    G++G   A S  
Sbjct: 194 FALIELHRRSKAGRSWALIRRGEMPALVAGVNVVLYQTWAFGLAGLLAGLSGGLLAGSVG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           ++    F  SE++++ ++ ++GG+           +L  V  L                 
Sbjct: 254 QLDGRAFAASESVLLFALSVVGGVYHWFGALITGLLLRAVPALLTDFG------------ 301

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                       AL   ++     +  
Sbjct: 302 VNGYLAMIFFGAALLHALVTAPAGIAG 328


>gi|126439501|ref|YP_001057110.1| ABC transporter, permease protein [Burkholderia pseudomallei 668]
 gi|126218994|gb|ABN82500.1| ABC transporter, permease protein [Burkholderia pseudomallei 668]
          Length = 349

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 60/327 (18%), Positives = 116/327 (35%), Gaps = 23/327 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+A +  L     +    +  Y        L   + A G++++   LGL+ L+     
Sbjct: 25  LALVATLGTLAAIALVVPAVADAYWIKTLTSALTISIAAAGVALLYRQLGLVCLSQHALL 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G +   +  +  G    L +   A    A GMI GLP+L+ RG YLA+ TL+M+  FQ
Sbjct: 85  GVGGWI-ALRLAHLGAPFELCVLAGAAGGSAIGMIAGLPALRLRGLYLALVTLMMAGGFQ 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++        G                +    R           +   +  +     L+
Sbjct: 144 VVVSAIGFPDGGGG----------FTGHLSFGARQMMARPLVGQSDAAYFRYVAAWAALA 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++I   RR+    +W  IR  +    +    ++F +  AF ++    G++G   A S  
Sbjct: 194 FALIELHRRSKAGRSWALIRRGEMPALAAGVNVVFYQTWAFGLAGLLAGLSGGLLAGSVG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           ++    F  SE++++ ++ ++GG+           +L  V  L                 
Sbjct: 254 QLDGRAFAASESVLLFALSVVGGVYHWFGALITGLLLRAVPALLTDFG------------ 301

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                       AL   ++     +  
Sbjct: 302 VNGYLAMIFFGAALLHALVTAPAGIAG 328


>gi|300790937|ref|YP_003771228.1| sugar ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299800451|gb|ADJ50826.1| permease component of ABC-type sugar transport system
           [Amycolatopsis mediterranei U32]
          Length = 325

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 90/312 (28%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  VV  ++  L          + ++  Q L+    A G ++V+   G + L+   +  
Sbjct: 22  ALALVVAIVVFSLATDTFFDLDNLSTVVQQSLVVGTLALGQTLVILIAG-IDLSNAASMV 80

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L +            + +      +I+G+            A +I    F  
Sbjct: 81  VATLIMAKLAAAGTNGFV-----ALLAGVVLTIIVGIFIGGLATRIKLPAFIITLGTFTM 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +    K I  G+A              V   +  +     ++   I + Y +     +  
Sbjct: 136 LTAVSKLIAGGQA------------VPVTDGVLQWLGTKRYLFGGIPITYGMTLALLMYL 183

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L +TA       + +  ++       +    LS + V+    G+A          
Sbjct: 184 GVWYALTKTAWGKHVYAVGNAPESARLSGIKVNRTVLSVYIVAGLTFGIAAWQALGRTPN 243

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P+ F+      + ++V     + GG  S+        ++  +      MN       L
Sbjct: 244 ADPNQFQLGNLDSITAVVLGGTSLFGGRGSVLGTLMGALVVAVLRSGLTQMNVDGNYQDL 303

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 304 ATGALLIAAVVV 315


>gi|221197803|ref|ZP_03570849.1| ribose transport system permease protein RbsC [Burkholderia
           multivorans CGD2M]
 gi|221204639|ref|ZP_03577656.1| ribose transport system permease protein RbsC [Burkholderia
           multivorans CGD2]
 gi|221175496|gb|EEE07926.1| ribose transport system permease protein RbsC [Burkholderia
           multivorans CGD2]
 gi|221181735|gb|EEE14136.1| ribose transport system permease protein RbsC [Burkholderia
           multivorans CGD2M]
          Length = 345

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 93/311 (29%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +V  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 46  VLLVLCIGFGFLTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 104

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A + ++  +  G   WL +P +  +    G I G      R     +    M+ +     
Sbjct: 105 AVASLLASTIPGW-GWLGVPAALAVGLVFGAINGGLISLLRLPPFIVTLGAMTAVRGVAR 163

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    LG           F          + ++++  C + A  
Sbjct: 164 L--------------------LGNDTTVFNPQLPFAFIGNGTIFGVPWLVVIACAVIAIS 203

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   +L  +A S    G+     AA     +
Sbjct: 204 WFILRRTVLGMRIYSVGGNPEAARLSGINVRAIQLFVYAASGLLAGLGAVMSAARLYAAN 263

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 264 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLTNGLVLLGVSDIWQYII 323

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 324 KGLVIIGAVAL 334


>gi|218678391|ref|ZP_03526288.1| amino acid ABC transporter, permease protein [Rhizobium etli CIAT
           894]
          Length = 171

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 53/171 (30%), Gaps = 14/171 (8%)

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           +    +   +    +++    L       +  TA+  A R    ++K    L   +    
Sbjct: 9   YQFGNISVSLKQIIIIVITAVLLTIFWYIVNHTALGRAQRATEQDRKMAALLGVNVDQTI 68

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F + +A   +AG  +      ++     F+  +   +  +LGG+ SL        ++
Sbjct: 69  SITFVMGAALAAVAGTMY-LRYYGVASFADGFTPGVKAFTAAVLGGIGSLPGAVLGGLMI 127

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             +  L        +  +  F               L  V++ +   +L  
Sbjct: 128 GLIESLWSAYFTIAYKDVATF-------------AILAFVLIFKPTGILGR 165


>gi|121595423|ref|YP_987319.1| inner-membrane translocator [Acidovorax sp. JS42]
 gi|120607503|gb|ABM43243.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidovorax sp. JS42]
          Length = 294

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/298 (12%), Positives = 100/298 (33%), Gaps = 26/298 (8%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           +    Y + + GL+++ G L + +      + +GA    +  + +G+S W ++ ++ ++ 
Sbjct: 20  VNGSFYAILSLGLAVIFGLLNVNNFAHGALFMMGAMITWMAMNYFGISYWWMLVLAPLVV 79

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
           G  G+++    L++         L+++     ++        G +G              
Sbjct: 80  GVFGVVIERLLLRWIYKLDHSYGLLLTLGLALLIEGAFRSVYGVSG----------LGYD 129

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
              +        F++   +  +V++    +  +    + +T +    R   +N +   + 
Sbjct: 130 TPELLEGATNLGFMVMPNYRAWVVVASVTVCIATWYVIEKTKLGAYLRAGTENPRLVEAF 189

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              +       +A  +A    AG   A                +  + +  +GGM S+  
Sbjct: 190 GVNVPVMVTLTYAFGAALAAFAGVLAAPVYQVTPLMGQNLIIVVFAVVV--IGGMGSIMG 247

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  L  +                     +    +T++ + + +V+L+R   L  
Sbjct: 248 SILTGLGLGVIEGFTKVF--------------YPEASSTVVFVIMAIVLLIRPAGLFG 291


>gi|91783813|ref|YP_559019.1| ABC ribose transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91687767|gb|ABE30967.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia xenovorans LB400]
          Length = 360

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/293 (14%), Positives = 91/293 (31%), Gaps = 27/293 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +   +L  L      +     ++  QI   V+ + G++ V+   G + L+     
Sbjct: 60  LAGALLAMIVLFSLLSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAG-IDLSVGSVL 118

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+G     +   ++G        +    +   G + G  ++ +R     ++  ++     
Sbjct: 119 ALGGSVVSVAALKWGWGPLPSALLGVAAAALTGTLTGAVTVGWRIPSFIVSLGVLEA--- 175

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                             A  + +  T  R+      F        + +    L    + 
Sbjct: 176 ------------------ARGMAYQMTNSRTAYIGDAFDFLSNPIAVGISPAFLIAVAVM 217

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L RT        I  N++A           K+  FA+     G+A  F  +  +
Sbjct: 218 VIAQLVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKVIVFALMGGLAGLAALFQISRLE 277

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
              P+     E  ++ ++VI     +GG  S+        I+  +      + 
Sbjct: 278 AADPNAGVGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIG 330


>gi|83312689|ref|YP_422953.1| branched chain amino acid ABC transporter permease
           [Magnetospirillum magneticum AMB-1]
 gi|82947530|dbj|BAE52394.1| Branched-chain amino acid ABC-type transport system, permease
           components [Magnetospirillum magneticum AMB-1]
          Length = 297

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 100/305 (32%), Gaps = 22/305 (7%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  I   +Y + A    ++  S  +++        IGA++   L +   L  ++  P++
Sbjct: 11  VNGLIVGTLYGVVAMCFVLIYKSTQVVNFAQGEFLLIGAWTCWWLVTSMALPFYVAFPMT 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +     G+ + +  L+       I+ ++++               G             
Sbjct: 71  FLFMMVFGIALQMIVLRPLIGEPVISVIMVTIGLSIFFQAVMKSIFGV-----------W 119

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                 +          +  +      L+    +      + + + +  A R    NQ+ 
Sbjct: 120 AQPFPEIFPVKSVDILGLSVQPAYLMSLVVSIVIMGLFAWFFKYSRMGLAMRATAFNQQV 179

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             SL  ++     +A+A+S+    +AG          S   F     I V   VI+GG+ 
Sbjct: 180 AQSLGISVKAVFATAWAISAMVSALAGVVVGMVNGVSSALSF---FGIKVFPAVIVGGLD 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        I+  +  L    +  Y +            +T      L ++++++ + L
Sbjct: 237 SIIGAVLGGLIIGVLENLAEYADGQYLH--------LGNLYTVAPFYVLVIILMIKPYGL 288

Query: 340 LRLRT 344
              +T
Sbjct: 289 FGTKT 293


>gi|307129205|ref|YP_003881221.1| membrane protein of an ABC transporter [Dickeya dadantii 3937]
 gi|306526734|gb|ADM96664.1| membrane component of an ABC transporter [Dickeya dadantii 3937]
          Length = 355

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/316 (12%), Positives = 88/316 (27%), Gaps = 18/316 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++  +   L +    +   +  M   + I  + A G+++V+   G + L+      
Sbjct: 17  FIALLIVVVFFSLMVPNFLTPSNLLIMTQHVAITGLLAIGMTLVI-LTGGIDLSVGAVAG 75

Query: 76  IGAYSYVILGSRYGLSI----WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           I       L +            L     +++ A   +            L +A  I + 
Sbjct: 76  ICGMVAGALLTNGIPLWGGNVLFLNVPEVILTVAVLGMAIGLVNGVVITRLVVAPFICTL 135

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
               +      + N        D   +        +    F        + +Y  +  M 
Sbjct: 136 GMMYVARGVALLFN--------DGSTYANLNGMPALGNTGFAFLGSGTLLGIYLPIWLML 187

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                 +   R+T +      I  N+ A       I+  K+  +A S     + G   A+
Sbjct: 188 AFLLLGLYLTRKTPLGRYIYAIGGNESAARLAGVPIVNVKIFVYAFSGLCAALVGLVVAS 247

Query: 252 SRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                 P      E   + + V     + GG   +S       +++ + +    M    F
Sbjct: 248 QLQTAHPMTGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFLADGMVMMGVSDF 307

Query: 307 NSLLKFDCSFNMRHTT 322
             ++            
Sbjct: 308 WQMVIKGVVIVTAVVI 323


>gi|255261448|ref|ZP_05340790.1| inner-membrane translocator [Thalassiobium sp. R2A62]
 gi|255103783|gb|EET46457.1| inner-membrane translocator [Thalassiobium sp. R2A62]
          Length = 343

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 108/344 (31%), Gaps = 52/344 (15%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY----------------- 81
           I +   +   Y + A GL+++ G+LG+++      + +GA+                   
Sbjct: 8   ILNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMLGAFCTVTLSRLLGISRTVIDET 67

Query: 82  ----------------------VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
                                     +    ++ L I  +  I  + G+IM    +K   
Sbjct: 68  RTDFLGNPLKVEIPYLYDWFGEATGAAIIDWAVPLSIIFAIPIMISIGVIMERGLIKHFY 127

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
           +      ++++     +L +      G   I       F G+        F   +  +IY
Sbjct: 128 NRPHADQILVTFGLAIVLQEIIKYYFGANQIPAPAPEAFTGSF--DFGAAFGAKAGAIIY 185

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
             +          L  ++  +LR T      R    +++    L   I       F +++
Sbjct: 186 PYWRIVYFCFAMILIGAVFAFLRFTTFGMVVRAGMADRETVGLLGINIDRRFTIMFGIAA 245

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  G+AG  +             F     V+ +V    M SL     A  +L  +     
Sbjct: 246 AVAGLAGVMYTPINSPNYHMGMDFLVISFVVVVVGG--MGSLPGAVLAGFVLGILES--- 300

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                 F S+ +        +  ++ +A  +++L R   L+  +
Sbjct: 301 ------FASMREVIEFLPGINQVVIYLAAIIILLTRPRGLMGRK 338


>gi|239626294|ref|ZP_04669325.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239516440|gb|EEQ56306.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47FAA]
          Length = 317

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/320 (11%), Positives = 90/320 (28%), Gaps = 26/320 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +N          ++  +   +   +  +Q+ + ++  Q  + V+ A   + ++   G + 
Sbjct: 10  INTQIIFTLTGLLILCVFFSITTKSFLTQRNLLNIATQTSVAVIVAIAETYIIA-SGCID 68

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A                    + ++     A G                    
Sbjct: 69  LSVGAGVAFSGLVVASAMKAGIPVP-AAMLLALGTGMALGAFNAFVITVLGIVPFIATL- 126

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                             G   I+    L  +     S ++             ++ + +
Sbjct: 127 ------------------GTNSIFRGIVLVIMDGVPMSGLKSEFTWIGSGKLWGWLPWAV 168

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + M  ++  + + L+++        I  N++A +     +   K+  + +S A +  AG 
Sbjct: 169 VFMAVIAVVMAILLKKSKFGRYVYAIGSNEQAAYLSGIPVNRIKVLNYVISGALVAFAGM 228

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
             AA     +P      E   + + VI      GG  S++       I+  +      + 
Sbjct: 229 LLAARVSSAAPTAGDLYETNAIAASVIGGATLSGGKGSIAGTIVGAFIIGVLSNGLNLIG 288

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
             YF   +            
Sbjct: 289 LNYFWQQVAIGVVIISAVFL 308


>gi|225548184|ref|ZP_03769469.1| hypothetical protein RUMHYD_00163 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040623|gb|EEG50869.1| hypothetical protein RUMHYD_00163 [Blautia hydrogenotrophica DSM
           10507]
          Length = 320

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/336 (11%), Positives = 98/336 (29%), Gaps = 40/336 (11%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
             F +  N+ +  +  + +    + F+   A +S   + ++  Q  IY + A G+  V+ 
Sbjct: 9   KRFKISKNRREITMFFVMLGMFAVGFVISPAFRSVNNVLNILNQNAIYGIMALGMGCVI- 67

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G + L+     A+                 + +  + +      +      L      
Sbjct: 68  LTGAIDLSAGSIVAL-----------------VGVIATPLFRDYGFVAGLFGGLATGAGL 110

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
             I  LI+++      +    + +   G             V S           V+   
Sbjct: 111 GLINGLIITKGKIGYFVTTLGMMSIARGAVYIITGGVPIQGVPSEYNVIGMGKIGVVPVA 170

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            + +++  +   S       + T +      I  ++ A +         K+ AF +    
Sbjct: 171 ALIWLIALIVMYSVL-----KYTRLGQYLYAIGGSENASWLSGIDTDKMKIIAFTLEGFL 225

Query: 242 IGMAGAFFAASRDRISPDM-----FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
             +AG          + D           + I+  + I GG  ++   A    I+  ++ 
Sbjct: 226 CAIAGLILNTRVLMATADAADGYEMTVIASCIIGGMAIDGGKGNIVGSAVGAIIMGLILN 285

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           +   M    +                +  + + + +
Sbjct: 286 ILQLMGVSSY------------WQKAVTGLIIIVAV 309


>gi|319796130|ref|YP_004157770.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315598593|gb|ADU39659.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 345

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 84/288 (29%), Gaps = 16/288 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +   L      +     ++  +     + A G+  V+   G + L+     A
Sbjct: 39  VIGLVLLCIAGTLLNSDFATVDNAMNVLTRTAFIGIIAVGMCFVI-ISGGIDLSVGSMAA 97

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + A S ++  +      W      + +       +    L           +    I   
Sbjct: 98  LIAGSVIMFIN------WAGPASGSPMLAVVMGAVLAIVLGAVFGLAHGLLITKGRIEPF 151

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I+             Y AD          S +    + +S     + ++  ++       
Sbjct: 152 IVTLGTLGIFRAYLTYFADGGALTLDNELSDLYAPVYYASLAGIPVPVWVFVIVAIIGGV 211

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +     RTA     + I  N++        +   K+  + +    +G+A   +      
Sbjct: 212 IL----NRTAYGRYVQAIGSNEQVARYAAVDVDRVKIMTYVLLGVCVGIATLLYVPRLGS 267

Query: 256 ISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELC 298
            SP      E   + ++++      GG  S++       +L  +  + 
Sbjct: 268 ASPTTGLLWELEAIAAVIVGGTALKGGAGSITGTVVGAILLSVISNIL 315


>gi|295091367|emb|CBK77474.1| monosaccharide ABC transporter membrane protein, CUT2 family (TC
           3.A.1.2.-) [Clostridium cf. saccharolyticum K10]
 gi|295115587|emb|CBL36434.1| monosaccharide ABC transporter membrane protein, CUT2 family (TC
           3.A.1.2.-) [butyrate-producing bacterium SM4/1]
          Length = 343

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/343 (10%), Positives = 96/343 (27%), Gaps = 27/343 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R  +      +  +V  +   +      S + + ++   +  Y++   G S V+   G 
Sbjct: 15  IRGMRGAMTAFVGLIVIYIAFGMINPTVFSGQNVMNLLRSMSKYLIIGIGQSYVL-ITGN 73

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+      + A     L +               ++    +   L      G  +   
Sbjct: 74  IDLSIGSVVGMSAMISATLMTHGIT---------PAVAIMITLCCCLAIGVINGILVGKC 124

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            L         +   + +     G    D +        +      F           ++
Sbjct: 125 QLPPFIATLGTMFVARGVAYMVNGNRNTDAISSGIGKEAADGFQNLFYYGKTAGVYNTFW 184

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + + +  +   ++    +T        I  N +A      +++      + VS+    + 
Sbjct: 185 IAIILFVIFFFLL---SKTRTGRHIYAIGSNVEAAKLSGVSVVSTVTKTYIVSAFCSFVV 241

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G       +  + +     E   V + VI     LGG   L       A+   +      
Sbjct: 242 GLILCGQANMGNMEAGNMYEMYAVAAGVIGGISPLGGTGILLGTLAGAAVWQTLENGL-- 299

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                  +++            ++V+   L+ ++    L + R
Sbjct: 300 -------NMIGVQVGIQRLVIGVIVVFAVLLDVVFRKGLFKKR 335


>gi|261420463|ref|YP_003254145.1| inner-membrane translocator [Geobacillus sp. Y412MC61]
 gi|319768133|ref|YP_004133634.1| inner-membrane translocator [Geobacillus sp. Y412MC52]
 gi|261376920|gb|ACX79663.1| inner-membrane translocator [Geobacillus sp. Y412MC61]
 gi|317112999|gb|ADU95491.1| inner-membrane translocator [Geobacillus sp. Y412MC52]
          Length = 293

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 85/288 (29%), Gaps = 14/288 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      IY + A G  I     G+L+L       +GA    I     G+     I +
Sbjct: 11  LFSGLTVGSIYALVALGFVITYSVTGILNLAQGDFAMLGALFC-ITLVNNGVPFAAAIGL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +   A G +    +++          +I++     +      +  G     +      
Sbjct: 70  SMLAVMAVGALFERLAIQPARRSPVAVLIIITIGASFVFRGIALLVWGTDPYALRPFTGH 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V   +  ++             + ++      A++ L+  RT I  A      N  
Sbjct: 130 GALEVFGAVIQWQ-----------SVWAIVISLASFAALHLFFHRTYIGKAVAACVINPF 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   I    L A AVS+    +AG   A      +         +      ++GG+
Sbjct: 179 AARLMGIDIRKMSLGAIAVSAGIGALAGIVIAP--ISGASYDMGMMIGLKAFIAAVVGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           T+         ++  +     G     +   + F     +       +
Sbjct: 237 TNAPAAIAGAFLVGLLESFAEGYLSSGYKEAISFGLLLLVLLFMPNGL 284


>gi|163758196|ref|ZP_02165284.1| branched-chain amino acid ABC transporter, permease component
           [Hoeflea phototrophica DFL-43]
 gi|162284485|gb|EDQ34768.1| branched-chain amino acid ABC transporter, permease component
           [Hoeflea phototrophica DFL-43]
          Length = 291

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 90/299 (30%), Gaps = 27/299 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                ++++ A GL+I+ G+ G++++       +GAYS  ++ +  GL  ++ IP+S +I
Sbjct: 14  LSIGSVFLVAALGLAIIYGTAGVINMAHGELIMLGAYSTFMMQTVLGLPFFICIPLSFVI 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
            G  G ++    +    +      L    +   ++   + I                   
Sbjct: 74  VGFIGYLIEKVLISSLYNRPLDTLLATWGVSLVLMQGVRIIFGSDPKYVEVPSFLSTN-- 131

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                         V    F  +V+     +  +      RT      R +  N+    S
Sbjct: 132 ---------IDLGIVNLSTFRLFVMFICLIMVLATWYLFYRTTFGIKVRAVTQNKDMAAS 182

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
                       FA+ +   G+AG+ F A    +      +     ++ +          
Sbjct: 183 FGINSSRIYSITFAIGAGLAGVAGSLFGAMNIVLPTMGTSYVVEAFLMVV---------- 232

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                      +  +          S   F  +       +  + + + +  R   ++ 
Sbjct: 233 -----AGGGGLLGSILASALTGQIQSAFAFIYNDTYARFLVF-VLIVIFLRFRPQGMIS 285


>gi|13473105|ref|NP_104672.1| ribose ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
 gi|14023853|dbj|BAB50458.1| ribose ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
          Length = 330

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 96/311 (30%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+             ++  +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 31  VLVLLAAGFQFINPRFLTETNLLIVTQQSSINIVLAAGMTFVI-LTGGIDLSVGSILAAS 89

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S       L +P + ++    G++ GL     R     +             
Sbjct: 90  AMV-AVLVSLVPDWGLLGVPAAILVGLGFGLVNGLLVAYIRLPPFIVTL----------- 137

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                       +    RL    TTV +    F F  +  ++ I   ++++    +    
Sbjct: 138 -------GSLTAVRGVARLLGQDTTVFNSDLPFDFIGNGSLFGIP--WLVVIALSVVVLS 188

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L L+RT +      +  N +A       +    L  + VS    G+ GA  AA     +
Sbjct: 189 WLVLKRTVLGAWIYAVGGNAEAARLTGIKVPLVLLFVYGVSGLLAGLGGAMSAARLYAAN 248

Query: 258 PDMFKFSENIIVISIVILGG------MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VILGG      + S+        I+  +               + 
Sbjct: 249 GLQLGQSYELDAIAAVILGGTSFVGGVGSIWGTLIGGLIIAVLSNGLILAGVSDIWQYII 308

Query: 312 FDCSFNMRHTT 322
                 +    
Sbjct: 309 KGLVIIVAVAL 319


>gi|83950517|ref|ZP_00959250.1| putative ABC transporter, permease protein [Roseovarius nubinhibens
           ISM]
 gi|83838416|gb|EAP77712.1| putative ABC transporter, permease protein [Roseovarius nubinhibens
           ISM]
          Length = 289

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 83/304 (27%), Gaps = 26/304 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            S   Q  IY + A  L++V  S  +++         GA+   +L    G++      ++
Sbjct: 7   ISGISQGAIYALIALSLTVVYRSTTIVNFGHGDFVMAGAFLSYVLVVLLGVAFVPAAMLA 66

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +     G+      ++       I   +M      +      I  G+  + +       
Sbjct: 67  VVAMFLLGLAFSRGLVRPIRGGPHIGFALMCISAGYVFRGIARIVWGREVLPMPRVFDIN 126

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +  LI             I +      +             T I    + +  + + 
Sbjct: 127 PIFIGDLIITGDAIFILSTTAIMLAVFFGVLAL-----------TDIGKMVQAVYQSARG 175

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +   +       + + +A   + G   A     +       S  I   + + LGG  
Sbjct: 176 AQLIGINVDRFNDFTWGIGAALGAIGGILIAP--ISLLHPDLGASFLIKGFAAMTLGGFG 233

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           SL        IL    +            +                + + LV+ +R H L
Sbjct: 234 SLYGAVLGALILGLSEQYAGAYIDSALIDITA-------------YLVIVLVLFLRPHGL 280

Query: 340 LRLR 343
              +
Sbjct: 281 FGRK 284


>gi|170734681|ref|YP_001773795.1| monosaccharide-transporting ATPase [Burkholderia cenocepacia MC0-3]
 gi|169820719|gb|ACA95300.1| Monosaccharide-transporting ATPase [Burkholderia cenocepacia MC0-3]
          Length = 353

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 88/302 (29%), Gaps = 12/302 (3%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            A  +   + S+   + I  +   G+++ +   G   L+     A    +   +   +  
Sbjct: 52  PAFLNLDNLFSILQAVSIVALLGIGVTVTLA-AGGFDLSVGSVAATAQMAASYVLVVWHG 110

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S W  +    ++  A G+  GL   + R     +ATL    +   + +      +   G 
Sbjct: 111 SAWAAVFACVVLGVAAGLFNGLLITRLR-VPDQLATLGTLFLLAGLQLIPTGGRSLATGS 169

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            + D      T    +          +     +   +L +  ++    + +  T      
Sbjct: 170 VLPDG-----TDATGVFPDAFLALGRLRVFDVVPLPVLLLAAVTVLACVTMEATRWGRVI 224

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR----DRISPDMFKFSEN 266
             I  N+ A           +++A+ VS A   + G   AA            +   +  
Sbjct: 225 YAIGGNETAARLAGAPAARYRIAAYVVSGAIASLGGVLIAARVGRGDVSAGHSLLLDAVA 284

Query: 267 IIVISIVILGGMT-SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
             +I   + G    ++         +  ++     +N  Y+           +       
Sbjct: 285 AALIGYAVWGAKRPNVFGTVVGAVFVGVLLNGLTMLNAPYYMQDFIKGVLLVLALAFTFG 344

Query: 326 IA 327
           I 
Sbjct: 345 IG 346


>gi|56420428|ref|YP_147746.1| sugar ABC transporter permease [Geobacillus kaustophilus HTA426]
 gi|56380270|dbj|BAD76178.1| sugar ABC transporter (permease) [Geobacillus kaustophilus HTA426]
          Length = 334

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/320 (10%), Positives = 93/320 (29%), Gaps = 28/320 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ +   +L+ +      +   + ++  Q+ +  + A G++IV+ + G + L+     
Sbjct: 35  MLMILIGLVILMSILSPTFFTTGNLLNIVRQMSVVGIVAIGVTIVIITTG-IDLSSGSVI 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ +             + + I +   +    G+I G    K       +   +M+    
Sbjct: 94  ALVSVVAASFAHPDTYPVIVPILIGLGLGLLTGVINGTIISKANIAPFIVTLGMMTAARG 153

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+       G                  S    +      +   + +    L      
Sbjct: 154 AALLFSDGRPIGN----------------LSPSFLWIGQGDVLGIPVPILIFALVGVISY 197

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +     +T        I  N++A       +   K+  +  +    G+AG    +   
Sbjct: 198 ILL----NKTKFGKYVYAIGGNEQAAVIAGVNVDKYKIFVYGYAGLLSGLAGVILTSRIS 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                       +  I+  ++GG +       A  I      +   +     N+ L    
Sbjct: 254 S-GQPTAGMMYELDAIAAAVIGGTS------LAGGIGTIGGTIVGALIIGVMNNGLDLLN 306

Query: 315 SFNMRHTTLMVIALFLVILM 334
                   L  + + + + +
Sbjct: 307 VSPYWQQILKGVIITVAVFI 326


>gi|291086911|ref|ZP_06344846.2| ribose ABC transporter, permease protein [Clostridium sp. M62/1]
 gi|291077369|gb|EFE14733.1| ribose ABC transporter, permease protein [Clostridium sp. M62/1]
          Length = 345

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/343 (10%), Positives = 96/343 (27%), Gaps = 27/343 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R  +      +  +V  +   +      S + + ++   +  Y++   G S V+   G 
Sbjct: 17  IRGMRGAMTAFVGLIVIYIAFGMINPTVFSGQNVMNLLRSMSKYLIIGIGQSYVL-ITGN 75

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+      + A     L +               ++    +   L      G  +   
Sbjct: 76  IDLSIGSVVGMSAMISATLMTHGIT---------PAVAIMITLCCCLAIGVINGILVGKC 126

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            L         +   + +     G    D +        +      F           ++
Sbjct: 127 QLPPFIATLGTMFVARGVAYMVNGNRNTDAISSGIGKEAADGFQNLFYYGKTAGVYNTFW 186

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + + +  +   ++    +T        I  N +A      +++      + VS+    + 
Sbjct: 187 IAIILFVIFFFLL---SKTRTGRHIYAIGSNVEAAKLSGVSVVSTVTKTYIVSAFCSFVV 243

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G       +  + +     E   V + VI     LGG   L       A+   +      
Sbjct: 244 GLILCGQANMGNMEAGNMYEMYAVAAGVIGGISPLGGTGILLGTLAGAAVWQTLENGL-- 301

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                  +++            ++V+   L+ ++    L + R
Sbjct: 302 -------NMIGVQVGIQRLVIGVIVVFAVLLDVVFRKGLFKKR 337


>gi|219850162|ref|YP_002464595.1| monosaccharide-transporting ATPase [Chloroflexus aggregans DSM
           9485]
 gi|219544421|gb|ACL26159.1| Monosaccharide-transporting ATPase [Chloroflexus aggregans DSM
           9485]
          Length = 343

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 99/299 (33%), Gaps = 19/299 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLF-LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
           +R  +  ++  +  +V  LL+F + +    S +  + +   + I  M A G ++VV    
Sbjct: 8   IRPEQIRELSLIGLIVIALLIFGWQIENFLSARTFNRITSSVAIVGMVAIGQTLVV-LTR 66

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+        AY      +       ++    A+++G    ++    + +      I
Sbjct: 67  NIDLSVGSIVGFTAYFVGSQLAANPGIPPVMAVALAVLTGGVLGLVNGLIVAYGRVPAII 126

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL    I++ +LI              A+       ++ S +      + F I +  + 
Sbjct: 127 TTLGTLAIYRMLLIN------------YANARTITVDSLPSWVVELSRQTLFTIGDFAVR 174

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            +              L  T        I  N +A            L+AF +     GM
Sbjct: 175 PLFAITIAAVIVFQFVLAYTVFGRRLYAIGSNPEAARFAGLPAQRTVLAAFVLCGMLAGM 234

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           AG  F A    I+    +  E   V ++V+      GG  ++        ++  + +  
Sbjct: 235 AGFLFLARFGNITAVAGQGIELESVAAVVVGGVNTFGGAGTVFGALLGAFLIDLLGQGL 293


>gi|53717687|ref|YP_106673.1| hypothetical protein BPSL0048 [Burkholderia pseudomallei K96243]
 gi|67641550|ref|ZP_00440326.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4]
 gi|124386266|ref|YP_001027817.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia mallei NCTC 10229]
 gi|126451046|ref|YP_001082235.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia mallei NCTC 10247]
 gi|167916935|ref|ZP_02504026.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei BCC215]
 gi|217424070|ref|ZP_03455570.1| ABC transporter, permease protein [Burkholderia pseudomallei 576]
 gi|254174910|ref|ZP_04881571.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia mallei ATCC 10399]
 gi|254357336|ref|ZP_04973610.1| ABC transporter, permease protein [Burkholderia mallei 2002721280]
 gi|52208101|emb|CAH34031.1| putative membrane protein [Burkholderia pseudomallei K96243]
 gi|126243916|gb|ABO07009.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia mallei NCTC 10247]
 gi|148026400|gb|EDK84485.1| ABC transporter, permease protein [Burkholderia mallei 2002721280]
 gi|160695955|gb|EDP85925.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia mallei ATCC 10399]
 gi|217393133|gb|EEC33155.1| ABC transporter, permease protein [Burkholderia pseudomallei 576]
 gi|238522500|gb|EEP85944.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4]
          Length = 349

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 59/327 (18%), Positives = 115/327 (35%), Gaps = 23/327 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+A +  L     +    +  Y        L   + A G++++   LGL+ L+     
Sbjct: 25  LALVATLGTLAAIALVVPAVADAYWIKTLTSALTISIAAAGVALLYRQLGLVCLSQHALL 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G +   +  +  G    L +   A    A GMI GLP+L+ RG YLA+ TL+M+  FQ
Sbjct: 85  GVGGWI-ALRLAHLGAPFELCVLAGAAGGSAIGMIAGLPALRLRGLYLALVTLMMAGGFQ 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++        G                +    R           +   +  +     L+
Sbjct: 144 VVVSAIGFPDGGGG----------FTGHLSFGARQMMARPLVGQSDAAYFRYVAAWAALA 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++I   RR+    +W  IR  +    +    ++  +  AF ++    G++G   A S  
Sbjct: 194 FALIELHRRSKAGRSWALIRRGEMPALAAGVNVVLYQTWAFGLAGLLAGLSGGLLAGSVG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           ++    F  SE++++ ++ ++GG+           +L  V  L                 
Sbjct: 254 QLDGRAFAASESVLLFALSVVGGVYHWFGALITGLLLRAVPALLTDFG------------ 301

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                       AL   ++     +  
Sbjct: 302 VNGYLAMIFFGAALLHALVTAPAGIAG 328


>gi|77465740|ref|YP_355243.1| ABC sugar transporter, inner membrane subunit [Rhodobacter
           sphaeroides 2.4.1]
 gi|126464219|ref|YP_001045332.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
 gi|77390158|gb|ABA81342.1| ABC sugar transporter, inner membrane subunit [Rhodobacter
           sphaeroides 2.4.1]
 gi|126106030|gb|ABN78560.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
          Length = 325

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/320 (12%), Positives = 99/320 (30%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+  + ++ L+ +   +L+ L   A      + S+    ++  + A G+ +V+   G + 
Sbjct: 4   LHSTEFVIALVLLAAMVLIGLVNPAFWGLDNLFSLAKSNVVIGIMALGVLLVM-ISGGID 62

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++         Y  V            +  ++A   G          ++       I TL
Sbjct: 63  VSFPAIAVAALYIVVRAMVELNYDGVFIPFLAAAAIGLVLGGFNAFIIERFRMIPLIVTL 122

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             + I + +++       G  G  + +        +           +       +  ++
Sbjct: 123 GTASIVRGLVL-------GLLGSSIVNINKMPKELIEFGRHDLMTVEAANGATYGLTSMV 175

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    ++  + L LR T I  +      + ++               + ++    G AG 
Sbjct: 176 LVYLGIALVMHLVLRHTMIGRSVYAYGTDAESARRAGFNTRRTIWFVYCLAGLLAGFAGM 235

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
              +   + +P  F+  E  ++ ++V     I GG  S++       +L+ V      + 
Sbjct: 236 LHTSMIWQANPRDFQGLELDVIAAVVLGGASIFGGRGSVAGTLIGVFMLVMVKNSLILLK 295

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
                  +            
Sbjct: 296 VDTTWQRVVVGLIIVAATAI 315


>gi|317402526|gb|EFV83093.1| inner-membrane translocator [Achromobacter xylosoxidans C54]
          Length = 300

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 75/248 (30%), Gaps = 4/248 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+I+ G L +++      + + A+   I  ++    +     +
Sbjct: 13  LLVGLINGCFYAILSMGLAIIFGLLNIVNFTHGAQFMMAAFLAWIGFTQLPQLLGPGAQI 72

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   +     ++           L     +        L+    I     G +       
Sbjct: 73  NFWAALVLAPLIVGAVGVVIEKTL--LKRLYHLDHLYGLLLTFGIALMMEGGFRYFYGIS 130

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    F   F+    +  +V++    L         RT +    R   +N +
Sbjct: 131 GVGYEPPEILQGGFDLGFMFLPAYRAFVVVASLLLCLLTWYLFERTRLGALLRAGTENAR 190

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +    A  G+AG   A         +   +   IV ++V++GG+
Sbjct: 191 LLQAFGVNVPVMITLTYGFGVALAGVAGVLAAPVMQI--NPLMGSNLLNIVFAVVVIGGL 248

Query: 279 TSLSKIAK 286
            S+     
Sbjct: 249 GSIMGAIV 256


>gi|228951155|ref|ZP_04113271.1| Ribose ABC transporter [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229068349|ref|ZP_04201652.1| Ribose ABC transporter [Bacillus cereus F65185]
 gi|229177190|ref|ZP_04304579.1| Ribose ABC transporter [Bacillus cereus 172560W]
 gi|228606371|gb|EEK63803.1| Ribose ABC transporter [Bacillus cereus 172560W]
 gi|228714810|gb|EEL66682.1| Ribose ABC transporter [Bacillus cereus F65185]
 gi|228808565|gb|EEM55068.1| Ribose ABC transporter [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 311

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 97/312 (31%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLVLIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +     +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMAV--GLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|227111818|ref|ZP_03825474.1| putative sugar ABC transporter, permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 365

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 86/299 (28%), Gaps = 9/299 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +        +    +   +  M   I I    A G++ V+ + G + L+      
Sbjct: 35  FIALFLILGFFAFTVPGFLATGSLIIMVKHIAINAFLALGITFVIITAG-IDLSIGATLG 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + ++  +     +  +   S    + + L      G          +     
Sbjct: 94  LCGMVAGYMITQGIVLPMFGV--AIFPSVWVIVPVVLLIGALIGAINGWIITRYNVAPFI 151

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             +    I  G + + ++    F        +    F        + +   +  M  L+ 
Sbjct: 152 CTLGTMYIVRGAS-MLISGGETFPSLGGNPQLGNTGFELIGSATILGLPLAIWLMLVLAV 210

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I    RR         I DN++A       +   K+  + +S     +AG   ++    
Sbjct: 211 VIAYVARRLPFGRHVYAIGDNERAAELSGVKVRQVKVWVYTISGFCAAIAGIVVSSQLVA 270

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             P      E   + ++V+      GG  ++        ++  + +    M    F  +
Sbjct: 271 SHPATGTAFEMNAIAAVVLGGTSLAGGRGTILGTLIGAFVIGILADGLVMMGVSEFWQM 329


>gi|158523020|ref|YP_001530890.1| inner-membrane translocator [Desulfococcus oleovorans Hxd3]
 gi|158511846|gb|ABW68813.1| inner-membrane translocator [Desulfococcus oleovorans Hxd3]
          Length = 291

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 88/279 (31%), Gaps = 13/279 (4%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           Y +   G+ ++  +  + +           +   +L + YG  +W     +   +   G 
Sbjct: 18  YALMGLGMVLIYKASEVPNFVQGEMALAPVFISYLLMNSYGAPVWAAFAGALAFAMVLGC 77

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
           I+    L+   +   +  +I++   + IL+       G     +   +            
Sbjct: 78  ILEFAVLRRAKEPNVLGLIIITIGLEMILLGLVSWKFGADQRSLPFPISSYD-------- 129

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                   +         L+    +   + L+ R + +  A +  + N+ A   +     
Sbjct: 130 --SVMIGNIFISTLDLLTLVVALVIMTILFLFFRFSKLGVAMKATQQNETAARLMGIRTN 187

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
             K+  + +S+    +AG   A     I      +   +   +  ++GGMTSL       
Sbjct: 188 RIKMVTWGISAMVGSVAGLLAAP---VIMEPFMMWDPMLKGFAGAVVGGMTSLPGAVVGA 244

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            ++  +  L  G     F S++ F     +       + 
Sbjct: 245 YLVGVIEHLFGGYVSIEFKSVVAFVVIVIVLCVKPSGLL 283


>gi|302555598|ref|ZP_07307940.1| ABC transporter membrane protein [Streptomyces viridochromogenes
           DSM 40736]
 gi|302473216|gb|EFL36309.1| ABC transporter membrane protein [Streptomyces viridochromogenes
           DSM 40736]
          Length = 358

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 97/320 (30%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +  + L AV   +         +    + ++  Q     + A  +++++   G   
Sbjct: 36  LARPEVGVFLGAVAVLVFFLFAAPPVRDGSSMANILYQSSTIGIMALPVALLM-IGGEFD 94

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A    A +  +L  +  L++W+ + V+ ++S   G   G   +K       + TL
Sbjct: 95  LSAGVAVVTSALTASMLSYQLTLNVWVGVIVALLVSLGIGAFNGWLLVKTGLPSF-LVTL 153

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I Q + +    +  G         +       +     F+     V   +  + V 
Sbjct: 154 GTFLILQGVNLAVTKLVTGNVATDDISDMDGFTQAQKLFASTFQVGGVNVKITVVWWLVF 213

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +            RT   N    +  N+++  ++   + F K+S F +        G 
Sbjct: 214 AALATWVLL------RTKYGNWIFAVGGNKESARAVGVPVTFTKISLFMLVGFGAWFVGM 267

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
               S + +        E I + + VI      GG  S         +   V +      
Sbjct: 268 HQLFSFNTVQSGEGVGQELIYIAAAVIGGCLLTGGSGSAIGPVFGAFMFGMVQQGIVYAG 327

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
           +                   
Sbjct: 328 WNPDWFKAFLGVMLLGAVLI 347


>gi|126667833|ref|ZP_01738799.1| Branched-chain amino acid ABC-type transport system, permease
           components [Marinobacter sp. ELB17]
 gi|126627649|gb|EAZ98280.1| Branched-chain amino acid ABC-type transport system, permease
           components [Marinobacter sp. ELB17]
          Length = 295

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 98/284 (34%), Gaps = 12/284 (4%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L +        +    I    Y + + GL+++ G L +++      Y +GA + VIL  
Sbjct: 4   ILGVPVAVLFGQLLLGLINGAFYALLSLGLAVIFGLLKIINFAHGALYMLGAMATVILFD 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+S W  + V+ ++ G  G+ +    L+       I +L+++     I+        G
Sbjct: 64  TLGISYWAALFVAPILVGCVGVAIEYFLLRKIAGQDHIYSLLLTFGVALIIQGVLTNMYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G+  +             +        F+    +  +V++    +       + +T +
Sbjct: 124 VSGLRYSMP----------DVFKGGMNLGFMFLPYYRAWVIVIALLVCFGTWFMIEKTKL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   ++ +        +       +         AGA  A                
Sbjct: 174 GAYLRAGTEDSQLMQGFGINVPLLVSLTYGFGVMLAAFAGALAAPIYSVTPVMGSHIL-- 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           I+V ++V++GGM S++       ++  V  L         ++++
Sbjct: 232 IVVFAVVVIGGMGSIAGAIITGVLMGVVEGLTKTFYPPASSAVI 275


>gi|144898570|emb|CAM75434.1| branched-chain amino acid ABC transporter, permease protein
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 297

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 95/299 (31%), Gaps = 22/299 (7%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           I   +Y + A    ++  S  +++        IGA++   L    GL  W   P++ +  
Sbjct: 15  IVGTLYGVVAMCFVLIYKSTQVVNFAQGEFLLIGAWTCWWLVVDAGLPFWFSFPLTFLFM 74

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
              G+ + +  L+       I+ ++++               G                 
Sbjct: 75  MVFGIALQMVVLRPLIGEPIISVIMVTIGLSIFFQSVTKWIFGAD-----------VQPF 123

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
             +          +  +      L+    + A    + + + +  A R    NQ+   SL
Sbjct: 124 PEIFPVKSVDVLGLQVQPAYLMSLVVSVLVMAGFAWFFKYSRMGLAMRATAFNQQVAQSL 183

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
             ++      A+A+S+    +AG              F     I V   VI+GG+ S+  
Sbjct: 184 GISVKNVFAMAWAISAMVSALAGVVVGMVNGVSGALSF---FGIKVFPAVIVGGLDSIIG 240

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 I+  +      ++  + +            +T      L ++++++ + L   
Sbjct: 241 AIVGGLIIGLLENFAEYVDGQWLH--------LGNLYTVAPFYVLIIILMIKPYGLFGT 291


>gi|300853340|ref|YP_003778324.1| putative sugar ABC transporter permease [Clostridium ljungdahlii
           DSM 13528]
 gi|300433455|gb|ADK13222.1| putative ABC-type sugar transporter, permease component
           [Clostridium ljungdahlii DSM 13528]
          Length = 324

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 87/298 (29%), Gaps = 28/298 (9%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            +      + K + ++  QI    + + G++ V+  LG + L+     A       +   
Sbjct: 37  AVLSPDFLTVKNVFNILQQIAQIGIISVGMTFVI-LLGGIDLSVGSIIAFTGLIMALCMK 95

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              +S+ L I V  ++  A G + G+   K +                            
Sbjct: 96  AG-MSVVLAILVGIILGAAIGFLNGILISKVKLQPFIATL-------------------- 134

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
              + +A  L +  T  + +  F     SF  +   +    + M  + A     L+ T  
Sbjct: 135 -GTMTMARGLAYTITNGQPVYSFSAGFKSFAGFIGVVPIPAIIMAVIFALGYYVLKYTKF 193

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                 I  N+ A       +   ++  + +S     +A     A  D   P     +E 
Sbjct: 194 GRYMYAIGGNRVASKLSGINVDKYEMLVYTISGICCAIAAIILTARLDSAVPVAGDGNEL 253

Query: 267 IIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
             + ++ I      GG   +        I+  +      ++               + 
Sbjct: 254 DAIAAVAIGGTSMTGGEGGIVGTLIGALIMGVIANGMNLLDVQQGPQRFAKGAIIILA 311


>gi|291617223|ref|YP_003519965.1| RbsC [Pantoea ananatis LMG 20103]
 gi|291152253|gb|ADD76837.1| RbsC [Pantoea ananatis LMG 20103]
          Length = 360

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 87/312 (27%), Gaps = 10/312 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      + +    +   +  M   + I  + A G+++V+   G + L+      
Sbjct: 22  FIALLIVVGFFSVMVPNFLTPSNMLIMTQHVAITGLLAIGMTLVI-LTGGIDLSVGAVAG 80

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I      ++      S   L   + +      +I+ +         +    +    +   
Sbjct: 81  I----CGMVAGALLTSGVPLWNGARLFLNVPEVILTVALFGTLVGIVNGTIITRLGVAPF 136

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I           A +   D   +        +    F        + ++  +  M     
Sbjct: 137 ICTLGMMYVARGAALLFNDGATYANLVGMPALGNTGFALLGSGTVLGVFIPIWLMIGFLL 196

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +   R+T +         N+ A       II  K+  +A S    G+ G   A+    
Sbjct: 197 LGLYLTRKTPLGRYIYATGGNESAARLAGVPIIKVKVFVYAFSGLCAGLVGLVVASQLQT 256

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + V     + GG   +S       +++ + +    M    F  ++
Sbjct: 257 AHPMTGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFLADGMVMMGVSDFWQMV 316

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 317 IKGVVIVTAVVI 328


>gi|27378034|ref|NP_769563.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27351180|dbj|BAC48188.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 301

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 85/290 (29%), Gaps = 22/290 (7%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+++ G + +++        I  Y    L + + +   L  P+ A      G ++ 
Sbjct: 32  IAVGLALIFGLMDVVNFAHGEFLMIAMYVSFFLFAFFAIDPLLSAPLVAAALFVFGAVVY 91

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           L  ++F       A    +      +     +     G+          +  +S +    
Sbjct: 92  LLIVRF-------AMRAKANAGMVQIFSTFGLAIVMRGLAQFFFTPDYRSIPQSWLGGKT 144

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                +          L      A +  ++ RT    A    R++  A   +        
Sbjct: 145 ISIGGIFLPEPQLIGALVSIAAFAGLYFFINRTDFGRALEATREDPGAVALVGIDKNRVF 204

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              + + +A +G+AGA  A             S  +I    V LGG  S+        I+
Sbjct: 205 ALGWGLGAALVGLAGAIMAVFFYI--YPDVGASFALIAYVTVALGGFGSVFGAFAGGIIV 262

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             V      +      S+              +     LV+ +R   L  
Sbjct: 263 GLVEATTALVLPPSLKSVG-------------IYAVYLLVVFIRPRGLFG 299


>gi|88855586|ref|ZP_01130249.1| permease protein of sugar ABC transporter [marine actinobacterium
           PHSC20C1]
 gi|88814910|gb|EAR24769.1| permease protein of sugar ABC transporter [marine actinobacterium
           PHSC20C1]
          Length = 324

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 96/294 (32%), Gaps = 25/294 (8%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
            L    ++  +   +      +   + ++  Q  +  + A G+++V+   G + L+    
Sbjct: 28  FLYGAFLLLIIGFTVANPLFLTAGNLLNILNQTALVTIMAAGVALVI-ITGEIDLSVGSV 86

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            A+   S  +  + +G + +L   V  ++  + G I G+ + +       +   ++S   
Sbjct: 87  LALSGVSAALFMNNFGQNWFLGALVGILVGASVGFINGILTARLLIPSFLVTLGMLSI-- 144

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
                          GI +            +        + F+     + + ++ +  +
Sbjct: 145 -------------ARGIALIMTGTAPVLVTNATFWSVFAETPFLGIPAPIVWTIVVIIIV 191

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              +      +           N  A           K+S F +S A  G+AG   AA  
Sbjct: 192 WVLLHF----SVFGRRIFATGGNLDAAKFSGINTRAVKISVFLISGALAGLAGVIVAARG 247

Query: 254 DRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
             I PD     E  ++ +++     + GG   +  +   + I+  +      M 
Sbjct: 248 HAIRPDAAAGIELDVLAAVILGGTSLFGGKGKIYGVILGSLIIGILNNGLVLMG 301


>gi|254227654|ref|ZP_04921085.1| amino acid or sugar ABC transport systems, permease protein,
           putative [Vibrio sp. Ex25]
 gi|262395702|ref|YP_003287555.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Vibrio sp. Ex25]
 gi|151939696|gb|EDN58523.1| amino acid or sugar ABC transport systems, permease protein,
           putative [Vibrio sp. Ex25]
 gi|262339296|gb|ACY53090.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Vibrio sp. Ex25]
          Length = 297

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 89/306 (29%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I  ++Y + A    ++  S  +++        IGA+          L  ++   +
Sbjct: 10  VINGVIVGMLYGVVAMCFVLIYKSTQVVNFAQGEFLLIGAWVCWAALVHLQLPFFIGFLL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G+ +    L+       I+ ++++               G + +        
Sbjct: 70  TLAFMMVFGIAVQTIVLRPLIGEPIISVIMVTIGLSMFFQALMKWIFGVSAVSYPQVFET 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +  E      L+   F+  +   + + + +  A R    NQ+
Sbjct: 130 -----------NVVNIGGLNVEFAYILSLIFSMFIMGAFYWFFKFSKMGLAMRATAFNQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  +I      ++A+S+     AG                    I V   VILGG+
Sbjct: 179 VAQSLGISIKKVFAISWAISAMVSATAGIVIGIVNGVSDALS---IIGIKVFPAVILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +  +  L    +  Y              +       L +++  + + 
Sbjct: 236 DSVVGAIVGGITIGVLENLAEFFDSQYL--------QVGNLYNIAPFYVLLIILAFKPYG 287

Query: 339 LLRLRT 344
           L   + 
Sbjct: 288 LFGTKD 293


>gi|190895256|ref|YP_001985549.1| putative branched-chain amino acid ABC transporter permease
           [Rhizobium etli CIAT 652]
 gi|190700917|gb|ACE94999.1| putative branched-chain amino acid ABC transporter, permease
           protein [Rhizobium etli CIAT 652]
          Length = 304

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 84/270 (31%), Gaps = 9/270 (3%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             +    +    Y + A GLS +   + +++L         AY   +L ++ G+  +  +
Sbjct: 3   NSLLQGILLGGYYAVIACGLSFMFSVMRIINLAHGSLAIAAAYGLWLLAAKAGIPPFAGL 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +        G ++    L+       +  ++ +     ++        G     +A   
Sbjct: 63  LIVLPTMAVFGWLLQRFILERSARGGTLLPILTTFGLSIVIDNLLFEQFGADTRSLAP-- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + +L          +        +++    L  ++  +L R A+  A R   ++
Sbjct: 121 -----FIGNLSYASWQLPGHIFVGKLAVMMMVTAILLLGALQFFLSRFALGRAIRATAED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 +          A A++   IG+AGAF                + +      ++G
Sbjct: 176 PDTAGLVGIDARRVNAVATAITMVTIGIAGAFLGMRATF--SPYAGGPQLLFAFETAVIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           G  SL        +L     L   ++   F
Sbjct: 234 GSGSLWGTLAGGIVLGLAQSLGAQLHPQGF 263


>gi|134295487|ref|YP_001119222.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|134138644|gb|ABO54387.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia vietnamiensis G4]
          Length = 315

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 97/312 (31%), Gaps = 21/312 (6%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +     L+  M + GL+++    G+L+      Y +GAY    + +R G    L++   A
Sbjct: 13  NGLSYGLLLFMLSAGLTLIFSVQGVLNFAHASFYMLGAYVGYSIAARVGFWPALVLAPLA 72

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +     G    L              L+   +   I    K +            L  L 
Sbjct: 73  VGLLGAGCERWLLRRVQARGGHTSELLLTFGLAYLIGEAAKLLWG----------LAPLP 122

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             V  L+      +  V    +  +++     +  ++ + LR + I    R    ++ A 
Sbjct: 123 APVPPLLDGAPVSAFGVALPRYRLFMMAMSAAMLIALGVLLRASRIGLVVRAALTHRAAV 182

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +L   +       F   +A   +AG   A     +       +   +V +IV++GG+ S
Sbjct: 183 EALGYDVPRVMTGLFGAGTALAALAGVIGAPLA--VIEPALAETVGSVVFAIVVIGGLGS 240

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN---------MRHTTLMVIALFLV 331
           L     A+  +          +    +       +                +  + L  V
Sbjct: 241 LGGAFVASLAVGFAQTCAASSDTSLRDLAHWAGVALPDGVAAVSLAQLAPLVPYLLLVAV 300

Query: 332 ILMRSHSLLRLR 343
           +  R   L   R
Sbjct: 301 LAARPRGLFGER 312


>gi|121611382|ref|YP_999189.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121556022|gb|ABM60171.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 297

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 84/305 (27%), Gaps = 16/305 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           ++     ++     + A GLS++ G +   ++  V     GA+      S        L 
Sbjct: 3   QFFIDTLLRTTDLALIALGLSMLYGLVKFPNVAHVQYAMCGAFLAYAGHSAGAPLAAALA 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             SA+       +  L   +      AIA +    I   ++   + I             
Sbjct: 63  LASALTGLITLALQRLVFKRLLQGGPAIAMIGSLAIAMLLVAGVQGIAG----------- 111

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + SL                          L  S +  L RT    A R +  N
Sbjct: 112 --SFPRMFSLPSMDPVVIGAARITPVQLGFCATTMALLLSFVGLLFRTRAGRAMRALASN 169

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                +          +   +S A  G+ GA  A S          +   + V +  ILG
Sbjct: 170 PMLAEACGLDAQRITYAVTFISGAVAGLGGAMLALSTGA--HINLGYDLLLPVFAAAILG 227

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +         ++     +   ++F                     +I L  + L + 
Sbjct: 228 GLGNPVGAVAGALLIALTETIVTHLDFGPLVGQELRFLPVAYIGAASFLILLLTL-LFKP 286

Query: 337 HSLLR 341
           H L  
Sbjct: 287 HGLFG 291


>gi|27378295|ref|NP_769824.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351442|dbj|BAC48449.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 300

 Score = 57.2 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 94/299 (31%), Gaps = 26/299 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I  ++  + A GL+++ G L +++ +    Y  GAY + +       S  L +   A  
Sbjct: 24  LIIGMLLFLVAVGLTLIFGVLKVVNFSHGAFYMFGAY-FAMTAYHLTDSFALAMLAGAGG 82

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +   G+I     +        +  L++   F  I      I  G     +     F    
Sbjct: 83  TAILGLIFERVFMSRVYGADVLMQLLVCYAFVLIFDDVVRIIWGPEFKSMGMPAAF---- 138

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                +      +  +   +   ++      +  + + L R+ I    R    N     +
Sbjct: 139 -----QVMPLFIAGGVVPPYYLLLIGVALVAAIVLGIGLSRSRIGKVIRAAAHNPGMVSA 193

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L           FA+     G+AGA  A  R         FS  I    + ++GGM S+ 
Sbjct: 194 LGINTGLIYGGVFALGGMLAGLAGALAAPVRSL--TPGMGFSVLIESFIVTVIGGMGSIL 251

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  ++  +                     F +    LM + + +V++ +   L  
Sbjct: 252 GALIGALLIGLIRSFGS--------------LGFPLFTEGLMYLFMVIVLVSKPTGLFG 296


>gi|261216099|ref|ZP_05930380.1| ABC transporter [Brucella abortus bv. 3 str. Tulya]
 gi|260917706|gb|EEX84567.1| ABC transporter [Brucella abortus bv. 3 str. Tulya]
          Length = 282

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 105/278 (37%), Gaps = 14/278 (5%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+  +  L +       L  +  ++    +G       + ++  +I+   +    L +V 
Sbjct: 1   MTELTQPLPQTRHSYAGLIGIVAIIAASVVGWFLFPDNL-ALLTRIIAIALLVLSLDLVT 59

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           G  G+ +L     +  GAY   I  + +      L+  +  +     G++ G   L+  G
Sbjct: 60  GYCGIATLGHAALFGAGAYGAGIAAAHFGVTDPILMTVIGLLAGAVTGLVSGAVILRATG 119

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
               + ++ +  +F     K    T G  G+         G               F +Y
Sbjct: 120 LAQLVLSIAVVHLFHEAANKASGWTGGSDGLSGISPDPIFGI------------FEFDLY 167

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              +Y   + +  +S   + ++ R+      R ++++     ++  ++  A+L  + +S 
Sbjct: 168 GRTVYIYAVILLLISFIFLRYVVRSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISG 227

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           A  G++GA  A S   +  D   F+ +   + +++LGG
Sbjct: 228 AVAGISGALNAISTQVVGLDSLSFTMSAEALVMLVLGG 265


>gi|256752301|ref|ZP_05493163.1| Monosaccharide-transporting ATPase [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256748788|gb|EEU61830.1| Monosaccharide-transporting ATPase [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 389

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/359 (11%), Positives = 93/359 (25%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   +L  L  ++ +      G   + + I ++  Q     + A G+  V+   G + L+
Sbjct: 25  KLYTMLIALIAIWAIFSIATDGNFITPRNISNLLRQATSTGILAIGMVFVI-IAGQIDLS 83

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT--- 126
                 +      IL   Y ++  + I V+  I    G+  G            +     
Sbjct: 84  VGSLLGLTGGIAAILNVWYHVNGIVSILVALAIGVIIGLWNGWWVAYRNVPAFIVTLAGM 143

Query: 127 --------------------------------------LIMSEIFQNILIKWKPITNGKA 148
                                                 L +   F  + +          
Sbjct: 144 LVFRGILIGISKGYTIAPLSSDFQFIGQAYLTQNSGYLLGIIAAFLIVYLVLNSRKTKAK 203

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                  L      +  LI         +     +   +L +  L+        +T    
Sbjct: 204 YNLDIPPLGIDILKMTFLIILVGLFVFILNLYQGVPLSVLILLILALIFSYISSKTVFGR 263

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N +A       +    L  FA++      AG    ++ +  S    + +E   
Sbjct: 264 RVYAIGGNVEAAKLSGIDVKKIILILFAINGLLAAFAGILLTSTLNAASVSAGQNAELDA 323

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + VI      GG+ ++        ++  +      +N   F   +       +    
Sbjct: 324 IAASVIGGASLSGGVGTVFGAVIGALVMASIDNGMSMLNSPPFWQFVVKGLILLIAVWI 382


>gi|255291858|dbj|BAH90353.1| branched-chain amino acid ABC transporter, permease protein
           [uncultured bacterium]
 gi|255292659|dbj|BAH89768.1| branched-chain amino acid ABC transporter, permease protein
           [uncultured bacterium]
 gi|255292838|dbj|BAH89939.1| branched-chain amino acid ABC transporter, permease protein
           [uncultured bacterium]
          Length = 321

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 90/315 (28%), Gaps = 26/315 (8%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L            + S      +Y + A G S+V G + LL+L          +  + L 
Sbjct: 28  LIAITMGETLINLVLSGLSTGGLYAVIALGFSLVAGVMRLLNLAHGEILVGSVFLMLALM 87

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           +   L  ++ +  +  I      ++    L+    + A + L+ +            +  
Sbjct: 88  NMLHLDPFIAMLGALPIVFVIAYVVQRTLLQQLLSHSAESLLVATFGLSIAGQAIFQLVF 147

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G   + +   L F G  V      +                ++    L+    L L  T 
Sbjct: 148 GPNAVSLDSMLGFTGVDVLGHTMRW-----------ISVVAIVFGVGLTTLTYLLLTYTT 196

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
              + R   ++  A  SL   +         + +                          
Sbjct: 197 FGKSLRAAAEDVLAAQSLGVDVRHVFALCLGLGAVLTACGAVIVG--IGFSVSPTSGMLW 254

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
            I  +++V++GGM S+     A  ++    E+                         ++ 
Sbjct: 255 LIRAVTVVVIGGMGSVWGTLFAAILVGVAEEV-------------GVLTFGPAYRDLVVF 301

Query: 326 IALFLVILMRSHSLL 340
             L LV+++R   L 
Sbjct: 302 SILILVLVIRPSGLF 316


>gi|225420014|ref|ZP_03762317.1| hypothetical protein CLOSTASPAR_06357 [Clostridium asparagiforme
           DSM 15981]
 gi|225041365|gb|EEG51611.1| hypothetical protein CLOSTASPAR_06357 [Clostridium asparagiforme
           DSM 15981]
          Length = 335

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/310 (11%), Positives = 91/310 (29%), Gaps = 15/310 (4%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           +     L   +F+    S   + ++  Q  I ++ +  +S+ +   G + L+     ++ 
Sbjct: 23  IFAALFLAFVIFIPNFGSATNLSTLIGQAAILMVLSSAMSLAI-ITGGIDLSVGGLVSLI 81

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
                 L           I +  + + A G + G+  +K +         +M        
Sbjct: 82  GIVIAQLIGWGVNEG-AAILLGLLTAAAFGFLNGIVVVKLKVAPFIATFGMMGV------ 134

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
              + + N  +            T +  L              + +   +L    + A++
Sbjct: 135 --AQGLANTFSNSRAVYLPSENITVIPVLQMNLLEWMFPSGNILTINVQVLITVLVLAAV 192

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           IL  ++T +      +  N++A    N       +  + ++    G+A        +   
Sbjct: 193 ILLFKKTVLGTYLYALGGNREAAKLSNIRTDVWNIGVYVITGLLAGVAALLMLLRLNSAQ 252

Query: 258 PDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
           P      E   V++ V     + GG  S+        ++  V              ++  
Sbjct: 253 PTAGDGLEFQAVVAAVLGGNLLAGGKGSIPGAIIGALVVYTVRNGLSLAGVNTNAVMVIL 312

Query: 313 DCSFNMRHTT 322
                +    
Sbjct: 313 GIVLVLGMMM 322


>gi|332560492|ref|ZP_08414810.1| inner-membrane translocator [Rhodobacter sphaeroides WS8N]
 gi|332274290|gb|EGJ19606.1| inner-membrane translocator [Rhodobacter sphaeroides WS8N]
          Length = 325

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/320 (12%), Positives = 99/320 (30%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+  + ++ L+ +   +L+ L   A      + S+    ++  + A G+ +V+   G + 
Sbjct: 4   LHSTEFVIALVLLAAMVLIGLVNPAFWGLDNLFSLAKSNVVIGIMALGVLLVM-ISGGID 62

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++         Y  V            +  ++A   G          ++       I TL
Sbjct: 63  VSFPAIAVAALYIVVRAMVELNYDGVFIPFLAAAGIGLVLGGFNAFIIERFRMIPLIVTL 122

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             + I + +++       G  G  + +        +           +       +  ++
Sbjct: 123 GTASIVRGLVL-------GLLGSSIVNINKMPKELIEFGRHDLMTVEAANGATYGLTSMV 175

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    ++  + L LR T I  +      + ++               + ++    G AG 
Sbjct: 176 LVYLGIALVMHLVLRHTMIGRSVYAYGTDAESARRAGFNTRRTIWFVYCLAGLLAGFAGM 235

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
              +   + +P  F+  E  ++ ++V     I GG  S++       +L+ V      + 
Sbjct: 236 LHTSMIWQANPRDFQGLELDVIAAVVLGGASIFGGRGSVAGTLIGVFMLVMVKNSLILLK 295

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
                  +            
Sbjct: 296 VDTTWQRVVVGLIIVAATAI 315


>gi|254973970|ref|ZP_05270442.1| ribose ABC transporter, permease protein [Clostridium difficile
           QCD-66c26]
 gi|255091357|ref|ZP_05320835.1| ribose ABC transporter, permease protein [Clostridium difficile CIP
           107932]
 gi|255313014|ref|ZP_05354597.1| ribose ABC transporter, permease protein [Clostridium difficile
           QCD-76w55]
 gi|255515773|ref|ZP_05383449.1| ribose ABC transporter, permease protein [Clostridium difficile
           QCD-97b34]
 gi|255648866|ref|ZP_05395768.1| ribose ABC transporter, permease protein [Clostridium difficile
           QCD-37x79]
 gi|260682082|ref|YP_003213367.1| ribose ABC transporter permease [Clostridium difficile CD196]
 gi|260685680|ref|YP_003216813.1| ribose ABC transporter permease [Clostridium difficile R20291]
 gi|260208245|emb|CBA60633.1| ribose ABC transporter, permease protein [Clostridium difficile
           CD196]
 gi|260211696|emb|CBE01990.1| ribose ABC transporter, permease protein [Clostridium difficile
           R20291]
          Length = 332

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 96/280 (34%), Gaps = 26/280 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +      +  V+  +++ +      +   + ++G QI I  + A G++ V+   G + L+
Sbjct: 24  RDQGSAAVGLVIIFIIMSVASSNFLTLDNLINVGRQISINAILAVGMTFVI-ITGGIDLS 82

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+    +      Y   IW+ + ++  I    G+I G      +           
Sbjct: 83  VGAVIALVGTFWATTVVNYNAPIWVGMILALAIGTILGVIKGAIISTQKLPPF------- 135

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 + +    I +G + ++   R           +    F      Y   +   ++ 
Sbjct: 136 -----IVTLAMLTIISGASFVFTGGRPI--------SVNTDAFKMLGRGYIGPIPIPVII 182

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           M  +  +    L+RT        +  N++A       +    +  +A++     +AG   
Sbjct: 183 MIIVVIAGHFLLKRTNFGRHVHAVGGNEEAARLCGVKVNKVIVKVYALAGLLTALAGIIL 242

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKI 284
           ++     SP +   +E   + ++V     ++GG  S+   
Sbjct: 243 SSRLASGSPTVGDGAELDAIAAVVLGGTNMMGGSGSIVGT 282


>gi|302384464|ref|YP_003820286.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
 gi|302195092|gb|ADL02663.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
          Length = 333

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 88/307 (28%), Gaps = 20/307 (6%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            ++L L      +   + ++  Q  +  + +  + +V+ + G + L+      + A    
Sbjct: 23  FIVLSLATDKFFTLNNMMNILRQTAVNGLISAAMLVVLITAG-IDLSVGANAILCACMMG 81

Query: 83  I-LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
           +   S    +  +LI V  +     G + G+   K    +  ++TL M  +   + +   
Sbjct: 82  MLKTSFGITNSLVLILVCIITGVFVGFLNGILLTKMHLPHPFVSTLGMKNVLCGLALLVV 141

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
                          +    T       F+    F    +    ++L        +    
Sbjct: 142 STKTISD--------FPAAVTFLGSSNLFKVSGGFSGIPLCFLILILIYVVYHFFL---- 189

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            +TA+      +  N +A            +  +++S     +AG          +P   
Sbjct: 190 NKTALGRMIYCVGGNPEAARLSGINSDNILIFVYSLSGFMCAIAGLVIVGRSAVANPSAA 249

Query: 262 KFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
               +   I+  I+GG        ++        ++  +      +N       +     
Sbjct: 250 ISPYDTDAIAACIIGGASFMGGKGTIWGTLIGALMISTIRNGLTLLNTSSSVQYVVIGLV 309

Query: 316 FNMRHTT 322
                  
Sbjct: 310 IIAAVFI 316


>gi|289644286|ref|ZP_06476372.1| inner-membrane translocator [Frankia symbiont of Datisca glomerata]
 gi|289505898|gb|EFD26911.1| inner-membrane translocator [Frankia symbiont of Datisca glomerata]
          Length = 725

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 50/313 (15%), Positives = 97/313 (30%), Gaps = 20/313 (6%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            + D +  L   V       F        +I           +    L IV G  G +SL
Sbjct: 322 QRRDVLGKLAGAVLLAAPLTFAPINLRDAFIVPAL------ALIFLSLVIVTGYSGQISL 375

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                  +GA     L       +  L  ++A + GA  +        +         L 
Sbjct: 376 GVAGYAGLGALLSAKLADGDLFGLPALPALAAPLVGALLVAPVGLLTGYPAIRRRGLALA 435

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           ++                  G  ++  ++   T V  L       +   + + + Y V L
Sbjct: 436 LTTF--------------AVGAVMSRFVFQQQTFVSGLHVAPLSVAGHTLSDRWFYVVEL 481

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
               L   ++  L    +  A   +RD+ +   ++   +   KL +F VS+A  G+ GA 
Sbjct: 482 LCLGLGLLVVRNLHEGRLGRALLAVRDHPEGAAAVGVDVRNLKLLSFTVSAAVAGLGGAL 541

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              S      D F    +++  + V++ G  S +    A   ++ +  L    +      
Sbjct: 542 LMLSYASFDADAFSPLNSLLWFTAVVVFGADSAAGAVVAAGFIVTIDTLAPAGSATLAVG 601

Query: 309 LLKFDCSFNMRHT 321
           +L     +     
Sbjct: 602 ILALSLGWLPGGL 614



 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/272 (12%), Positives = 73/272 (26%), Gaps = 10/272 (3%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY-VILGSRYGLSIWLLIPVSAMISGA 105
            I  +   GL +   + G+L++      A+ AY +  ++           +   A++S  
Sbjct: 15  AIAALSGIGLLVTYRTNGVLNIAQGGIAALVAYVFRAMVVDWQLPVPVAALLSLAVVSPL 74

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
            G+++     +      A A   +      +++               D           
Sbjct: 75  IGIVLERFVFRPLARRRASAAESLVASLGVLVLTVGMTAGIWGLGSRNDAPSLFPEQTVG 134

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
           L    R     +     +  V +        + L   RT      R + D+++       
Sbjct: 135 LPGGSRIGVDALAELALVVAVCVT-------LGLITTRTRFGRQVRAVVDDRRLAELSAI 187

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                  + +AV +   G  G   A         +      +   ++V+   + SL    
Sbjct: 188 PADRVAAAGWAVGTTLAGFTGILLAPRLQLTPYGLT--LLVLETFAVVVAARLASLPGAV 245

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
                +  +             S L      N
Sbjct: 246 LTALAIGILQSELSQFQVTGEFSALYLAVQSN 277


>gi|241206165|ref|YP_002977261.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860055|gb|ACS57722.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 287

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 89/303 (29%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y    +    GL     +  +
Sbjct: 9   VDALAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMIGGYIASYVARDLGLGYAAAVIAA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +I+    + +     +       +  ++M+      +I       G            L
Sbjct: 69  VVITIIVAIPIERFLYRRIYGAPELTQVLMTIGITFCVIGIANYVMGPT----------L 118

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T   +          F    +   +V+L    ++ ++   + RT+     R   D+   
Sbjct: 119 KTIPLAGALQGSADLGFRTIPVHRLFVILCGLVVALALWFAIDRTSFGVKLRASVDDAAM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FAV+       G   A          +     +  + +V +GG  
Sbjct: 179 AAALGVRTEIIYAVSFAVAVGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L  +      +   +                    +A+  +I +    L
Sbjct: 237 SIPGALIACLLLGAIDTTGRYLMPEFGE--------------FFFYLAVIAIICVFPRGL 282

Query: 340 LRL 342
              
Sbjct: 283 AGR 285


>gi|121608917|ref|YP_996724.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121553557|gb|ABM57706.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 296

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 89/292 (30%), Gaps = 11/292 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   IY   A G+SI   S+GL++L     YA   Y   +       +  +++  
Sbjct: 10  LINAVVLACIYGTLAIGISITWSSVGLINLAYGFIYAAAGYGAWMTAQHITGNGAMVLAA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +     G+ +   +     D        M       LI  + +               
Sbjct: 70  GVLTGALAGLFVCALAFIPIHDKPNFPVRGMIATLAISLIGMQTLLW---------VFGP 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   +  +                    +L      A++++W+R +      R +  N  
Sbjct: 121 LSKNLPEIFGSGSVMLGDTALTADKIGNVLVSIGFVAAVVMWMRSSRRGLEIRAMMMNPH 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +        A++ A  G+A    + +           +  I  +SI + GG+
Sbjct: 181 AAAIVGIGVRRTGFYVMAITGAMAGLAAVLLSQTYYI--SPFGGLTPMIKGVSIALCGGL 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            S+     A  IL     L   +    +  + +F     +       IA  +
Sbjct: 239 GSVQGAIIAAVILGLNEALTSVVLGGQYVLITQFLLIIVILLIRPRGIAGIV 290


>gi|88801165|ref|ZP_01116709.1| branched-chain amino acid ABC transporter, permease protein
           [Reinekea sp. MED297]
 gi|88776102|gb|EAR07333.1| branched-chain amino acid ABC transporter, permease protein
           [Reinekea sp. MED297]
          Length = 423

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 51/346 (14%), Positives = 113/346 (32%), Gaps = 37/346 (10%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
              L LL  +  ++  + LG    ++ +  +   ILI + +   ++ +    G +     
Sbjct: 95  SVFLKLLIGIVLIVGSMQLGRFGVRQNVRRLITLILIAITYIVFMNSLDPVAGAIESEVG 154

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                G            L +W+      +++G     +G   L  R DYLA+ATL ++E
Sbjct: 155 FIGGFG------------LPVWIGWVFGGLVAGGIAYFIGHICLGLRSDYLAVATLGIAE 202

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I +  L     +T G   +                         FV+       +   M 
Sbjct: 203 IIKAFLKNADWLTRGTLTVSPLPWPTPGPA-----------ELGFVMARALYLSLTALMI 251

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +   ++            R IRDN+ +  ++   +   +L  F   +  +G+ GA   +
Sbjct: 252 VVIFFLLTRAYNAPWGRMLRAIRDNETSALAMGKNVNKRRLEVFVFGAILMGIGGAVLGS 311

Query: 252 SRDRISPDMFKFSEN-IIVISIVILGGMTSLSKIAKATAILIGVVELCCGM--------- 301
                 P  +    +  ++  +VILGG  +          +  +  +   +         
Sbjct: 312 FNGIFDPSGYIPLNHTFLIWVMVILGGAGNNLGTLFGAVFVYILWTMSEPVALWVFDVIR 371

Query: 302 ----NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                ++ + +    D         ++ + + LV+      ++  R
Sbjct: 372 NLGDAWFGWEAPGDLDSRALQARVFVIGLTITLVLRYAPKGVIPER 417



 Score = 41.4 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 30/77 (38%)

Query: 17 LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
          ++       L L + +     Y   M ++   Y + A GL+I  G  GL +   +   AI
Sbjct: 9  IILFSGLFALILLVMSFMGMAYSTRMLVEASCYAIIALGLTIQWGYAGLFNAGIMGFLAI 68

Query: 77 GAYSYVILGSRYGLSIW 93
          GA+  ++         W
Sbjct: 69 GAFLTMLFSYPVNEDFW 85


>gi|319781222|ref|YP_004140698.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317167110|gb|ADV10648.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 332

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 96/311 (30%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + ++             ++  +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 33  VLILLAAGFQFLNPRFLTETNLLIVTQQSSINIVLAAGMTFVI-LTGGIDLSVGAILAAS 91

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    ++ S       L +P + ++    G+I GL     +     +             
Sbjct: 92  AMV-AVIVSLVPDWGLLGVPAAILVGLGFGLINGLLIAYIKLPPFIVT------------ 138

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                       +    RL    TTV +    F F  +  ++ I    ++     + + +
Sbjct: 139 ------LGSLTAVRGVARLLGQDTTVFNSDLPFDFIGNGSLFGIPWLVIIALSVVVLSWL 192

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
           +L  +RT +      +  N +A       +    L  + VS    G+ GA  AA     +
Sbjct: 193 VL--KRTVLGTWIYAVGGNAEAARLTGIKVPLVLLFVYGVSGLLAGLGGAMSAARLYAAN 250

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +               + 
Sbjct: 251 GLQLGQSYELDAIAAVILGGTSFVGGVGSIWGTLIGGLIIAVLSNGLILAGVSDIWQYII 310

Query: 312 FDCSFNMRHTT 322
                 +    
Sbjct: 311 KGLVIIVAVAL 321


>gi|291617972|ref|YP_003520714.1| RbsC [Pantoea ananatis LMG 20103]
 gi|291153002|gb|ADD77586.1| RbsC [Pantoea ananatis LMG 20103]
          Length = 350

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 98/319 (30%), Gaps = 26/319 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + ++ V   L+  +F    + Q ++ +      + +Q+ I  + A G++ V+ + G + L
Sbjct: 38  IFVVMVGIALIFEIFGWYVRDQSFLMNTNRLILIVLQVAIIGIIAVGVTQVIITTG-IDL 96

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+ A     L                 ++     ++ +P+       + +  L 
Sbjct: 97  SSGSVIALTAVVAASLAQTSDT-----------LTPMFPSLVNMPAAVPIAAGIGVGLLC 145

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                  I     P      G+ V+ R      T  + I F     + +        + L
Sbjct: 146 GLINGVLITRTGIPPFIATLGMMVSARGLAQYYTQGNPISFLSDGFTSIGQGAMPVVIFL 205

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +        + L+ T        I  N  +       +    +  + ++ A  G+AG  
Sbjct: 206 VVA---LVFHVALKHTRYGKYVYAIGGNMTSAKVSGINVNKYLIIVYTIAGALSGLAGVV 262

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            AA        M    E   + + VI     +GG+  ++       IL  +      +  
Sbjct: 263 LAARVSSGQSSMGVGYELDAIAAAVIGGSSLMGGVGRITGTLIGAVILGLIKSGFTFVGV 322

Query: 304 YYFNSLLKFDCSFNMRHTT 322
             +   +          T 
Sbjct: 323 DAYIQDIIKGIIIVAAVTI 341


>gi|237805478|ref|ZP_04592182.1| inner-membrane translocator [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331026585|gb|EGI06640.1| inner-membrane translocator [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 245

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/236 (11%), Positives = 63/236 (26%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G +G+++      Y I AY   I  +          P 
Sbjct: 9   MVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGDVYMISAYLAAIGLAVLSFFGVESFPF 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    +++                   + +   I      +               
Sbjct: 69  LILGTLVFTIVVTGVYGFVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQ 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+          S FV       ++L+        +   ++ T +    R  + ++K
Sbjct: 129 GVPTLLEGAWRIEIGSGFVQITYTKIFILIAAFVGMGVLTYIIKYTKLGRMCRATQQDRK 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
               L           F + +A   +AG     +                  + V+
Sbjct: 189 MASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYAGFIIGIKAFTAAVL 244


>gi|229077977|ref|ZP_04210586.1| Ribose ABC transporter [Bacillus cereus Rock4-2]
 gi|228705315|gb|EEL57692.1| Ribose ABC transporter [Bacillus cereus Rock4-2]
          Length = 311

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 96/312 (30%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLVLIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +     +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMAV--GLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M     
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFV 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|209550760|ref|YP_002282677.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209536516|gb|ACI56451.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 287

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 87/303 (28%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y         GL   + +  +
Sbjct: 9   VDAFAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMIGGYIASYAARDLGLGYAIAVIAA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++    + +     +       +  ++M+      +I       G     +       
Sbjct: 69  IVVTILVAIPLERFLYRRIYGAPELTQVLMTIGITFCVIGLANYAMGPTLKTIPLPAALQ 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G               F    +   +V+     ++ ++   + RT+     R   D+   
Sbjct: 129 G----------SADLGFRTIPVHRLFVIFCGLAVALALWFAIERTSFGVKLRASVDDAAM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FAV+       G   A          +     +  + +V +GG  
Sbjct: 179 AAALGVRTEIIYAVSFAVAVGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L  +      +   +                    +A+  +I +    L
Sbjct: 237 SIPGALIACLLLGAIDTTGRYLMPEFGE--------------FFFYLAVIAIICVFPRGL 282

Query: 340 LRL 342
              
Sbjct: 283 AGR 285


>gi|171462841|ref|YP_001796954.1| inner-membrane translocator [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171192379|gb|ACB43340.1| inner-membrane translocator [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 306

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/317 (12%), Positives = 96/317 (30%), Gaps = 17/317 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L +        +    I    Y + + GL+I+ G L +++      Y +GA+   I  +
Sbjct: 4   LLGITPQGLVAQLLVGLINGSFYAILSLGLAIIFGLLNIINFAHGAQYTMGAFIAWIGLT 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
           +    +               + + L       +   +  L   +    +L+ +      
Sbjct: 64  QISQWLGFPELSINYWFALIIVPLVLAGFGLILERTMLRRLYHLDHLYGLLLTFGLALII 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRF-FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           +        +         +++      S  +I   +  +V++    +  S    + RT 
Sbjct: 124 EGMFRHWCGISGESYPAPEMLQGAIPLESIGIILPKYRVWVVVISLVVCFSTWYVIERTK 183

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +    R   +N K   +    +      A+A      G AG   A         +   + 
Sbjct: 184 LGAYLRAGTENPKLLQAFGINVPLMISLAYAYGVGLAGFAGVLAAPIFQV--NPLMGSNL 241

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
            I+V ++V++GGM S+                                  +      ++ 
Sbjct: 242 IIVVFAVVVIGGMGSIM--------------GAILTGLGLGLVEGLTKVFYPEASGVVIF 287

Query: 326 IALFLVILMRSHSLLRL 342
           + + +V+L+R   L   
Sbjct: 288 VIMAIVLLIRPAGLFGR 304


>gi|158422104|ref|YP_001523396.1| branched-chain amino acid ABC transporter permease protein
           [Azorhizobium caulinodans ORS 571]
 gi|158328993|dbj|BAF86478.1| branched-chain amino acid ABC transporter permease protein
           [Azorhizobium caulinodans ORS 571]
          Length = 279

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 56/316 (17%), Positives = 115/316 (36%), Gaps = 43/316 (13%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
             Y+  + + +   +M A+ + + +   G L+L      AIGAY+   L +  G S+W  
Sbjct: 2   SGYLTGVLVVLSFNIMAAYAVYLPLA-AGQLNLGIAGFMAIGAYAAAYLTNELGWSLWTA 60

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           IP  +  +G  G+I+G+P L+  G YLA+AT  + ++   I +    +            
Sbjct: 61  IPAGSAAAGLVGLIIGIPVLRTHGIYLALATFALGQVIAAIFLNLDVV------------ 108

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                             + + +       V+         ++L L RT  +     ++ 
Sbjct: 109 ---------------GAAAGYPVATYAAPPVVFAATAGVVLVMLLLSRTRYALYLTAVKS 153

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           +      +  ++   ++SAFA+ +A  G  GAF+A     I    F    ++  +  V+ 
Sbjct: 154 DPTVADLMGISVRGIQVSAFALGAAVAGFGGAFYAHHYSFIEAQHFNVLLSVFTVLYVLF 213

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ ++            V E+                 + +     L    + + + +R
Sbjct: 214 GGVQTVWGPLAGAIFFTLVPEVLR---------------ASDQWRYALFAFFIIIFMALR 258

Query: 336 SHSLLRLRTPSNFLER 351
              L+       F  +
Sbjct: 259 PQGLVTASLFRVFRRK 274


>gi|150388425|ref|YP_001318474.1| monosaccharide-transporting ATPase [Alkaliphilus metalliredigens
           QYMF]
 gi|149948287|gb|ABR46815.1| Monosaccharide-transporting ATPase [Alkaliphilus metalliredigens
           QYMF]
          Length = 329

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 105/290 (36%), Gaps = 28/290 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L+     ++ ++      S   + ++  QI +  + A+G +I++   G+L L+     
Sbjct: 19  IFLVLAALVIVSWIANENFLSVGNLSNVSRQIAVVTILAFGQTILI-ISGMLDLSSGSVL 77

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+     V           LL  + A+++     ++    +        IATL M  + +
Sbjct: 78  ALAGVLSV--SVYTMTESLLLAFIVAILASVACNMLNGLMVTKFKAPPFIATLAMMTMAR 135

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              + +    N                 +   ++F +  +  V   I    ++L + +  
Sbjct: 136 GAALLYTNGQN--------------IYQIGDYVKFGQGSTFGVPTPIVFMIIILFITWYI 181

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                  + T +  +   I  N++A  +    +   K+ AF V+  F+G+AG  F +  +
Sbjct: 182 L------KHTTLGRSVYAIGGNEEAANASGINVNKVKMKAFIVNGIFVGIAGVIFMSRVN 235

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
              P+     E   + + +I      GG+ +       + I+  +  +  
Sbjct: 236 GGMPNGAVGYEFKSLTAAIIGGTSFTGGIGTAVGTLAGSFIVGFLDNIMV 285


>gi|327193528|gb|EGE60420.1| putative branched-chain amino acid ABC transporter, permease
           protein [Rhizobium etli CNPAF512]
          Length = 304

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 84/270 (31%), Gaps = 9/270 (3%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             +    +    Y + A GLS +   + +++L         AY   +L ++ G+  +  +
Sbjct: 3   NSLLQGILLGGYYAVIACGLSFMFSVMRIINLAHGSLAIAAAYGLWLLAAKAGIPPFAGL 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +        G ++    L+       +  ++ +     ++        G     +A   
Sbjct: 63  LIVLPTMAVFGWLLQRFILERSARGGTLLPILTTFGLSIVVDNLLFEQFGADTRSLAP-- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + +L          +        +++    L  ++  +L R A+  A R   ++
Sbjct: 121 -----FIGNLSYASWQLPGHIFVGKLAVMMMVTAILLLGALQFFLSRFALGRAIRATAED 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 +          A A++   IG+AGAF                + +      ++G
Sbjct: 176 PDTAGLVGIDARRVNAVATAITMVTIGIAGAFLGMRATF--SPYAGGPQLLFAFETAVIG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           G  SL        +L     L   ++   F
Sbjct: 234 GAGSLWGTLAGGIVLGLAQSLGAQLHPQGF 263


>gi|50120877|ref|YP_050044.1| putative sugar ABC transporter permease [Pectobacterium
           atrosepticum SCRI1043]
 gi|49611403|emb|CAG74851.1| putative sugar ABC transporter, permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 365

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 91/299 (30%), Gaps = 9/299 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +        +    +   +  M   I I    A G++ V+ + G + L+      
Sbjct: 35  FIALFLILGFFAFTVPGFLATGSLIIMVKHIAINAFLALGITFVIITAG-IDLSIGATLG 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + ++  +     I +   +     +++ + +L    +   I    ++     
Sbjct: 94  LCGMVAGYMITQGIVLPMFGIAIFPSVWVIVPVVLVIGALIGAINGWIITRYNVAPFICT 153

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +   +       A + ++    F G      +    F        + +   +  M  L+ 
Sbjct: 154 LGTMYIVR---GASMLISGGETFPGLGGNPQLGNTGFELIGSGTILGLPLAIWLMLVLAL 210

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I    RR         I DN++A       +   K+  + +S     +AG   ++    
Sbjct: 211 VIAYVARRLPFGRHVYAIGDNERAAELSGVKVRQVKVWVYTISGFCAAIAGIVVSSQLVA 270

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             P      E   + ++V+      GG  ++        ++  + +    M    F  +
Sbjct: 271 SHPATGTAFEMNAIAAVVLGGTSLAGGRGTILGTLIGAFVIGILADGLVMMGVSEFWQM 329


>gi|317047771|ref|YP_004115419.1| inner-membrane translocator [Pantoea sp. At-9b]
 gi|316949388|gb|ADU68863.1| inner-membrane translocator [Pantoea sp. At-9b]
          Length = 369

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 89/299 (29%), Gaps = 9/299 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +        +    +   +  M   I I    A G++ V+ + G + L+      
Sbjct: 33  FIALFLIVGFFSATVPDFLALGSMVIMVKHIAINAFLALGITFVIITAG-IDLSIGATLG 91

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L ++  +     I  +   S    + + L      G          +     
Sbjct: 92  LCGMIAGWLITKGIVLPMFGI--AIFPSVWVIVPLVLLVGALIGAANGWIITRYNVAPFI 149

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             +    I  G A +  +    F G     L+    F      Y + + + +  M  L+ 
Sbjct: 150 CTLGTMYILRGAA-MLTSGGETFPGLQGNPLLGNTGFDKIGAGYFLGLPWAIWMMIVLAL 208

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I    RR         I DN++A       +   K+  + +S     +AG   ++    
Sbjct: 209 VIAYIARRLPFGRQVYAIGDNERAAELSGVKVRQVKIWVYTLSGFCAAIAGIVVSSQLVA 268

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             P      E   + ++V+      GG  ++        ++  + +    M    F  +
Sbjct: 269 SHPANGTSFEMNAIAAVVLGGTSLAGGRGTILGTLVGAFVIGFLADGLIMMGVSEFWQM 327


>gi|239628198|ref|ZP_04671229.1| inner membrane ABC transporter permease protein ydeY [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239518344|gb|EEQ58210.1| inner membrane ABC transporter permease protein ydeY [Clostridiales
           bacterium 1_7_47FAA]
          Length = 339

 Score = 56.8 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 81/312 (25%), Gaps = 26/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L       ++     A      I +     +++ + A G + V+   G + ++      
Sbjct: 16  FLFLAALIFIVGCVNPAFWQPTSILNCFNDSVVFTLLAVGSAFVI-LTGEIDVSVGATLG 74

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + A     L       +  ++   A+ +    +                    +S +   
Sbjct: 75  MSAAVGATLLRDGSNWLAAILAALAIGAVIGFV----------------NGFGVSVLQIP 118

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            LI    +     G+            + +                F    +L +     
Sbjct: 119 SLIFTLGVNGVVRGLIYVYTKGAWVENLPAEYTRMSNTLIAGQLTTFYAVTILIVVAGHL 178

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +     +T     +  + DN      +       K+ A+ +S  F   AG  + +    
Sbjct: 179 IL----TQTKKGKYFIAVGDNAAGATLVGIPATQTKIMAYILSGIFAAAAGMIYTSRIGF 234

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           I+P      E   + + V     + GG  SL   +    I+  +  +   + F       
Sbjct: 235 ITPTAGNSYEMKAIAACVLGGIALTGGQGSLIGASIGAIIMSSISRILVFLGFSSDYDNT 294

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 295 ITGILLITIVVI 306


>gi|282896715|ref|ZP_06304723.1| Permease protein of ABC transporter [Raphidiopsis brookii D9]
 gi|281198433|gb|EFA73321.1| Permease protein of ABC transporter [Raphidiopsis brookii D9]
          Length = 378

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 53/158 (33%), Gaps = 3/158 (1%)

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
                + +L ++      + IR++++   +L   +   KL +  +  A  G+AGAFFA  
Sbjct: 224 FVFWRLEFLVQSPWGRVLKAIREDEEVPKALGKNVFSYKLQSLILGGAIAGIAGAFFAWQ 283

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
              I PD F+         +VILGG  +         I      L               
Sbjct: 284 LSAIYPDNFQPQLTFDAWIMVILGGSGNNLGTILGAVIYFAYDALTREFLPKIVPLD--- 340

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                      + + L  +++ R   +L  +      +
Sbjct: 341 AERIGAFRIMFIGLILMSLMIWRPQGILGKKEELTLGK 378


>gi|119468887|ref|ZP_01611912.1| putative branched-chain amino acid ABC transporter, permease
           protein [Alteromonadales bacterium TW-7]
 gi|119447539|gb|EAW28806.1| putative branched-chain amino acid ABC transporter, permease
           protein [Alteromonadales bacterium TW-7]
          Length = 297

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 90/306 (29%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  I  L+Y +      +V  S  +++        +GA+    +     L   +   +
Sbjct: 10  IINGLIVGLLYGVVGMCFVLVYKSTQIVNFAQGEFLLVGAWVCWSVLIYLELPFIVGFLL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +     A G+++ +  L+       I+ ++++               G +          
Sbjct: 70  TMAFMAAFGILIQMIVLRPMIGEPIISVIMVTIGLSIFFQALMKWIFGVSAQSYPQ---- 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +          +  E       +    +  +  L+ + +    A R    NQ+
Sbjct: 126 -------VFDAQSIQIFGLNIESAYLMSTVIALIIMVAFYLFFKHSKYGLAMRATAFNQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  ++      ++ +++     AG          S         I V   VILGG+
Sbjct: 179 IAQSLGISVKQVFAMSWGIAATVSATAGIVIGMVNGVSSSLSM---MGIKVFPAVILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +  +  L    +  Y +            +       L +++  + + 
Sbjct: 236 DSIVGAIVGGLTIGVLENLAEFFDSQYLH--------VGNMYDIAPFYVLLIILWFKPYG 287

Query: 339 LLRLRT 344
           L   + 
Sbjct: 288 LFGTKD 293


>gi|186475994|ref|YP_001857464.1| monosaccharide-transporting ATPase [Burkholderia phymatum STM815]
 gi|184192453|gb|ACC70418.1| Monosaccharide-transporting ATPase [Burkholderia phymatum STM815]
          Length = 343

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 96/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    V    L  +      +     ++  QI   V+ + G++ V+   G + L+     
Sbjct: 43  LAGALVAMIALFSVLSSHFLTYDTFITIANQIPDLVVMSVGMTFVLIIAG-IDLSVGSVL 101

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GA    +   ++ L  +    +  + +   G I G  ++ +R     ++  ++     
Sbjct: 102 ALGASVVSVAALKWQLGPFAAAALGLVAAALTGTITGAVTVGWRIPSFIVSLGVLEA--- 158

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                             A  L +  T  R+      F        + +    L    + 
Sbjct: 159 ------------------ARGLAYQMTNSRTAYIGDAFDFLSNPIAVGISPAFLIAVAVM 200

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L RT        I  N++A           K+  FA+  A  G+A  F  +  +
Sbjct: 201 IVAQLVLTRTVFGRYLVGIGTNEEAVRLAGVNPKPYKVIVFALMGALSGLAALFQISRLE 260

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +      +        
Sbjct: 261 AADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGANEPTKR 320

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 321 IITGAVIVVAVVL 333


>gi|329908903|ref|ZP_08274986.1| inner-membrane translocator [Oxalobacteraceae bacterium IMCC9480]
 gi|327546570|gb|EGF31546.1| inner-membrane translocator [Oxalobacteraceae bacterium IMCC9480]
          Length = 425

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/339 (12%), Positives = 115/339 (33%), Gaps = 35/339 (10%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  +      ++ +       +    S+  Q+    +FA   ++++G  G+LS  
Sbjct: 6   RPLNLVRWVIWCCFAVILVVAPLIFHEGASLSLLSQVGTLTIFALSFNMLLGQGGMLSFG 65

Query: 70  C------VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
                     +AI A +     +   + + L+  +  +     G++ G  + K  G   +
Sbjct: 66  HAVYSGLGAFFAIHALNMA--TAGAPIPVMLVPLIGGVAGMGFGILFGYVTTKKSGTTFS 123

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           + TL + E+     + +     G+ GI              + +    F       +I +
Sbjct: 124 MITLGLVELVFAASLMFPEFFGGEGGIS------------TNRVIGEPFMGITFGPQIQV 171

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           YY++    F++   +    +T +      +RDN +    +     + +     +S+ F G
Sbjct: 172 YYLIAFWLFITTIGMYAFTQTPLGRLANAVRDNPERVEFIGYDTQWVRYMTLILSAFFAG 231

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           ++G   A + + +S +      +  V+    +GG+           I + +  +      
Sbjct: 232 ISGGLSAINFEIVSAENVSALRSGAVLLFTFIGGIGFFFGPMIGAVIGVFLTVMLSDFTK 291

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +                  + +   L+++     L  L
Sbjct: 292 AW---------------QLYLGVFFILIVMYAPGGLASL 315


>gi|307699902|ref|ZP_07636953.1| branched-chain amino acid ABC transporter, permease protein
           [Mobiluncus mulieris FB024-16]
 gi|307614940|gb|EFN94158.1| branched-chain amino acid ABC transporter, permease protein
           [Mobiluncus mulieris FB024-16]
          Length = 362

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 105/315 (33%), Gaps = 15/315 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL-L 66
           L+  +  L L+ +   LL+    G   +   +  +   +++  +FA G  +V+ S G+ +
Sbjct: 34  LHANEFYLFLVLLGVSLLIQARSGQFFTINNLLDLANAMIVPGLFAIGAHMVLVSGGIDV 93

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           S   + + A+ A +  ++   +     +++ +   +    G   GL + +     L I  
Sbjct: 94  SFPALGSLAVYAVARFMVDIDFRDPFLVVLLIIMAVGALLGAFNGLFTSQLAAPTLIITL 153

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
             M+         +  I  G  G     RL              R  +     +  +   
Sbjct: 154 GTMNV--------FAGIMQGALGAVQISRLPEPIDKF-GRAVLLRVENVHQGTQSILPAT 204

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            +    +   I   ++ T    A   +  +++A   +   + + K   + +      +AG
Sbjct: 205 FIFFVIVLVLIGFVMKYTMFGRALYAMGGDEQAAIRVGFRVKWIKFWLYVIVGVIAAIAG 264

Query: 247 AFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
               +   +++P      E +++ ++V     I GG  SL  +   T ++  +       
Sbjct: 265 LMSVSVTHQMNPTDLLGMEMMVIAAVVLGGTAITGGKGSLLGVVMGTMLIAIIQTNMIMA 324

Query: 302 NFYYFNSLLKFDCSF 316
                          
Sbjct: 325 GIPTTGKRFVLGLMI 339


>gi|254695696|ref|ZP_05157524.1| Bacterial inner-membrane translocator [Brucella abortus bv. 3 str.
           Tulya]
 gi|261216098|ref|ZP_05930379.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya]
 gi|260917705|gb|EEX84566.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya]
          Length = 289

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 86/303 (28%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y       + GL+    I ++
Sbjct: 9   VDALAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMIGGYFASYAAQQLGLNYGFAIIIA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + +    + +     +       +  ++M+      +I          GI        L
Sbjct: 69  VVGTMIIAVPVERLLYRRIYGAPELTQVLMTIGVTFCII----------GITNYIFDPTL 118

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T     +        F        + +     ++  +   + RTA     R   DN   
Sbjct: 119 KTIPLPEMLRGSVHLGFRAIAKHRIFAIGCGLAVAVGLWYAVERTAFGVKLRAAVDNANM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FA++       G   A          +     +  + +V +G   
Sbjct: 179 AAALGVRTEIVYAVSFALAIGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGRAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L  +      +                        +A+ +++ +    L
Sbjct: 237 SIPGALVACLLLGAIDTTGRYLA--------------PEYGEFFFYLAVIVIVTLFPRGL 282

Query: 340 LRL 342
              
Sbjct: 283 AGR 285


>gi|33597386|ref|NP_885029.1| putative ABC-transporter permease component [Bordetella
           parapertussis 12822]
 gi|33602126|ref|NP_889686.1| putative ABC-transporter permease component [Bordetella
           bronchiseptica RB50]
 gi|33573813|emb|CAE38121.1| putative ABC-transporter permease component [Bordetella
           parapertussis]
 gi|33576564|emb|CAE33642.1| putative ABC-transporter permease component [Bordetella
           bronchiseptica RB50]
          Length = 290

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 89/307 (28%), Gaps = 27/307 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           ++I S      +Y + A G +I+  + G+++        +G    V             +
Sbjct: 6   QFIFSGVTVGAVYALVALGFAIIFNATGVVNFAQGEFVMLGGMITVFAHGAGLALPLAAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A+ +     +  L     RG  +    +I       I    + +             
Sbjct: 66  LAIAVTAATGVALNRLAIEPARGAPVVSLIIITIGASIFIRGAVQSLFG----------- 114

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                ++ +                   +++ G   +   + L+  RT I  A     +N
Sbjct: 115 -KQIHSLPAFSGDDPIHVLGATILSQSLWMIGGAVAVFIVLWLFFTRTLIGRAVLATSNN 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +     F    +FA+S+A   +AG         ++      +  +   +  +LG
Sbjct: 174 RLAARLVGINTRFIMTLSFALSAAIGALAGVLITP--ITLTSYDVGLTLALKGFAAAMLG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM S         +L  +  L  G     +     F             + +  V+    
Sbjct: 232 GMGSPKGALAGGILLGLLESLTAGYLSSQYKDAAAF-------------LTILAVLFFMP 278

Query: 337 HSLLRLR 343
             L   +
Sbjct: 279 QGLFGHK 285


>gi|326330598|ref|ZP_08196904.1| ribose transport system permease protein RbsC [Nocardioidaceae
           bacterium Broad-1]
 gi|325951610|gb|EGD43644.1| ribose transport system permease protein RbsC [Nocardioidaceae
           bacterium Broad-1]
          Length = 351

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 88/297 (29%), Gaps = 27/297 (9%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG--L 90
             S   + ++     +  + + G++ V+ + G + L+     A+ +     L ++     
Sbjct: 65  FASVDNVMTILRLAAVIGVVSIGMTFVI-TGGGIDLSVGAMVALSSVWCTTLSTQAMAND 123

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W+ I  +A++ GA   ++    + + G    IATL M    + +              
Sbjct: 124 YHWIFIVTTALLVGAGAGLVNGLLVAYGGVVPFIATLAMMASARGLA------------- 170

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                   +      ++    F  +F    + +  ++     ++    + L RT      
Sbjct: 171 ------EIISARKTQIVSVPGFTDAFSRDILGISVLVWIFVIVAVIGWVVLNRTTFGRRT 224

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N +A       +    +  + +     G+A     +     S    +  E   + 
Sbjct: 225 LAIGGNPEASRLAGINVRRHTVLLYVLVGLCCGIAAVMLVSRTTTGSATHGQLYELDAIA 284

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           ++VI      GG  ++        I   +  +    N                    
Sbjct: 285 AVVIGGTLLAGGRGTIVGTVFGVLIFTTLTNVFVINNLSISAQAFTKGLIIVAAVLL 341


>gi|284045392|ref|YP_003395732.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283949613|gb|ADB52357.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 364

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 100/317 (31%), Gaps = 28/317 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGA-TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           L +   I  ++A      +   L A + +   + +M     +  + A G ++V+   G +
Sbjct: 27  LTRSPAIGIVIATAILFAVSPLLAADSLASTSLLTMLPFAAVMAIAALGQTLVIQQGG-I 85

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+   + ++ +    +        I   + +    +   G++ G       G    +AT
Sbjct: 86  DLSVAGSISLASVIVTVHADGDDGKILSALLLVLAAALVVGLLNGALVSFL-GIPPIVAT 144

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L M+ +    + +      G A                         +  +   + +   
Sbjct: 145 LGMNSLLLGAVQQLSGGATGAA--------------------PDGLTNVALDRTLGIPNT 184

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L    L+  + L +++T +   +  +  + ++  ++   +   + +A+  +S    +AG
Sbjct: 185 VLVAVPLTLLVYLLVKKTVVGRRFEAVGVSPRSARAMGIAVQRHRFAAYVAASLAYALAG 244

Query: 247 AFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
              A                  V ++V     + GG  ++   A     L  + +L   M
Sbjct: 245 VMLAGYVKTPGISGGDAYLLPSVAAVVLGGTALTGGRGNVLASALGALFLSQLNQLVLSM 304

Query: 302 NFYYFNSLLKFDCSFNM 318
                   L        
Sbjct: 305 GAPTAVQYLISGAIIAA 321


>gi|226364373|ref|YP_002782155.1| branched-chain amino acid ABC transporter permease protein
           [Rhodococcus opacus B4]
 gi|226242862|dbj|BAH53210.1| putative branched-chain amino acid ABC transporter permease protein
           [Rhodococcus opacus B4]
          Length = 285

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 82/305 (26%), Gaps = 28/305 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                +Y + A G +IV  S    +        +G +          L I ++   + + 
Sbjct: 8   LALGAVYTLVAIGYNIVFISSHTFNFAQAQLMMVGTFVAYTGLVTLKLPILVVAVTATVA 67

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 I  + +++   D+               L     I      I+ ++ L      
Sbjct: 68  VMILAGIEEIVAVRPVRDH--------QNQLVTTLGAATLINGATQLIWGSEPLTVPFFG 119

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               I      +  V   + +  V+L +            +T    A   I ++++A   
Sbjct: 120 SNDPITVLGGRTYPVEIVLLILAVVLVVALGRVG-----TKTMTGLALLGISEDREAALL 174

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
               +    L AFA S A  G  G F       +       +  I     + +GG  SL 
Sbjct: 175 RGVNVRALALGAFAFSGALAGFLGLFVGPKTFAV--ATLGSALAIKGFVALAIGGFGSLP 232

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   +  V                      +      + + L  ++++R   L   
Sbjct: 233 GALVGGLTVGLVESFAA-------------LELGSQYSNIAVFVVLITILMVRPAGLFGR 279

Query: 343 RTPSN 347
                
Sbjct: 280 TRERV 284


>gi|167571941|ref|ZP_02364815.1| ABC transporter permease protein [Burkholderia oklahomensis C6786]
          Length = 340

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 95/311 (30%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +   L      + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 41  VLVLLCIGFSLMTDGFFTLQNLSIVAQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 99

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S      WL IP + ++  A G++ G      R     +    ++ +     
Sbjct: 100 A-VASLLASNIPGWGWLGIPAALLVGLAFGVVNGGLISFLRLPPFIVTLGALTAVRGIAR 158

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    +G           F        + + ++++    + A  
Sbjct: 159 L--------------------MGNDTTIFNPQLPFAFIGNGSILGVPWLVVIALAVVAIS 198

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   +L  +A S    G+     AA     +
Sbjct: 199 WFILRRTVLGMRIYSVGGNPEAARLSGINVRGIELFVYASSGLLAGLGALMSAARLYAAN 258

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 259 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLSNGLVLLGVSDIWQYII 318

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 319 KGLVIIGAVAL 329


>gi|51595165|ref|YP_069356.1| ABC sugar transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|186894179|ref|YP_001871291.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
 gi|51588447|emb|CAH20055.1| ABC sugar transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|186697205|gb|ACC87834.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
          Length = 375

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 92/299 (30%), Gaps = 9/299 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +      + +    +   +  M   I I    A G++ V+ + G + L+      
Sbjct: 35  FIALFLILGFFSIMVPGFLATGSLIIMVKHIAINAFLALGITFVIITAG-IDLSIGATLG 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + ++  +     I +   +     +++ + +L    +   I    ++     
Sbjct: 94  LCGMIAGWMITQGIVLPMFGIAIFPSVWVVVPVVLVIGALIGAVNGWIITRYNVAPFICT 153

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +   +       A + ++    F G      +    F        + +   +  M  L+ 
Sbjct: 154 LGTMYVVR---GASMLISGGETFPGLQGNPQLGNTGFDLLGSGTLLGLPIAIWIMFILAL 210

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I    RR         I DN++A       +   K+  + +S     +AG   +A    
Sbjct: 211 VIAYVARRLPFGRHVYAIGDNERAAELSGVKVRQVKVWVYTLSGFCAAIAGIIVSAQLVA 270

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             P      E   + ++V+      GG  ++        ++  + +    M    F  +
Sbjct: 271 SHPANGSGFEMNAIAAVVLGGTSLAGGRGTILGTLIGAFVIGILADGLVMMGISEFWQM 329


>gi|95930555|ref|ZP_01313290.1| inner-membrane translocator [Desulfuromonas acetoxidans DSM 684]
 gi|95133390|gb|EAT15054.1| inner-membrane translocator [Desulfuromonas acetoxidans DSM 684]
          Length = 288

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 88/291 (30%), Gaps = 13/291 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           ++I +      IY + A G S+V  ++G+++   V   ++G           GL +   +
Sbjct: 9   QFIIAGLTNGAIYALIALGFSVVHNAMGIVNFVQVDFVSLGGMLMFSALLTLGLPMMPGV 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++        M++    L+    +  +  + ++     IL     +  G          
Sbjct: 69  LLAVAGVALVAMLVERFGLRPSRSHNELVLIFLTIGLSIILRGAMKMIWGTN-------- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +  L                  ++L+      + +  +   T +  A R +  N
Sbjct: 121 ---RMALPPLSGEKPIALFGATILPQAVWILVLTVVAISLLHWFFHHTPLGLAMRAVASN 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             A   +       +L+++ ++ A  G+AG                    +   +  ILG
Sbjct: 178 PTAAAVVGIRGGRIRLTSYGIAGALGGLAGVLVTPITTL--SYDVGVLLGLKGFAAAILG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           G  S          L  +  L  G     +  ++ F     +       + 
Sbjct: 236 GFGSFPGAILGGIGLGLLESLSAGYWSSAYKDVVAFVVLLLVLFVRPKGLL 286


>gi|304397587|ref|ZP_07379464.1| inner-membrane translocator [Pantoea sp. aB]
 gi|304354759|gb|EFM19129.1| inner-membrane translocator [Pantoea sp. aB]
          Length = 355

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 85/312 (27%), Gaps = 10/312 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      + +    +   +  M   + I  + A G+++V+   G + L+      
Sbjct: 17  FIALLIVVGFFSVMVPNFLTPSNLLIMTQHVAITGLLAIGMTLVI-LTGGIDLSVGAVAG 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I       L +              +      + +    +      +     +   I   
Sbjct: 76  ICGMVAGALLTNGIPLWGGNTLFLNVPEVILVVAIFGVLVGLINGTVITRLGVAPFICTL 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            ++         A +   D   +        +    F        + +Y  +  M     
Sbjct: 136 GMMYVAR----GAALLFNDGGTYANLIGLPALGNTGFALLGSGTVLGVYLPIWLMLGFLL 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +   R+T +      I  N+ A       II  K+  +A S    G+ G   A+    
Sbjct: 192 LGLYLTRKTPLGRYIYAIGGNESAARLAGVPIIKVKVFVYAFSGLCAGLVGLVVASQLQT 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + V     + GG   +S       +++ + +    M    F  ++
Sbjct: 252 AHPMTGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFLADGMVMMGVSDFWQMV 311

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 312 IKGLVIVTAVVI 323


>gi|170741353|ref|YP_001770008.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168195627|gb|ACA17574.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 317

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 114/321 (35%), Gaps = 28/321 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +  ++  + A GL+++   +G+L+      Y +GA+    +        W+ + V+
Sbjct: 10  LNGVLYGMLLFLMASGLTLIFSMMGVLNFAHASFYMLGAFFGYQISRFT--GFWVGLVVA 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +  G  G ++    L+    +  +  L+ +     ++ +   +  G            +
Sbjct: 68  PLAVGGIGALIERFGLRNVHRHGHVPELLFTFGLAYVIEEAVQMVWG---------KLPV 118

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              V +L+ F  F      Y  +  ++L+    + A ++L L RT I    +    +   
Sbjct: 119 DYRVPALLDFPAFTIFDTNYPAYKLFMLVVSVTIFAGLLLVLTRTRIGLIIQAALTHPSM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L   +    +  F + +    +AG     +   ++          I+  +V++GG+ 
Sbjct: 179 VAMLGHDVAKVFMLVFGIGTGLAAVAGVIAGPAL--VTQANMAGLLGPILFVVVVVGGLG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLK---------------FDCSFNMRHTTLM 324
           SL+    A+ ++  V      ++    +                   +  +       + 
Sbjct: 237 SLTGAFVASLLIGLVQTFAVSLDVSPASVAAALGIAAAPGAGVLGDLWTVTIAQVGPVIP 296

Query: 325 VIALFLVILMRSHSLLRLRTP 345
            + L +V+++R   LL  R  
Sbjct: 297 YLLLVIVLIVRPTGLLGNREA 317


>gi|160902111|ref|YP_001567692.1| monosaccharide-transporting ATPase [Petrotoga mobilis SJ95]
 gi|160359755|gb|ABX31369.1| Monosaccharide-transporting ATPase [Petrotoga mobilis SJ95]
          Length = 332

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/327 (13%), Positives = 93/327 (28%), Gaps = 12/327 (3%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F L L  Y     ++ V   L   + L    +   + ++   I I  + A  ++I +   
Sbjct: 9   FDLFLFLYKYGTIIVIVATILFFSITLDNFLNFTNVTNILRSISIVALIALAVTISLTIN 68

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G   L+        +     +   +G+     I V  ++    G I     +K +   L 
Sbjct: 69  G-FDLSVGAIAGFASVIAAKIMVIWGMGPVPAIIVPLIVGALIGAINAFLIIKMKIPDL- 126

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
                ++ +    L+    IT                  +   I    +          +
Sbjct: 127 -----LTTLSMMFLLTGISITFQSGSAIYNYMPLPNNAGIAPGIMSEAYLFIGRGELFHI 181

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
              ++ M  +   + ++L  T        I  N++A           KL A+ +S     
Sbjct: 182 PVPVIIMLSVVILVHIFLNLTKYGRFLYMIGGNEEAARLSGINTNKYKLIAYMLSGLIAA 241

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELC 298
           + G    A       D         V +      V   G  +         ++  ++   
Sbjct: 242 LGGLVLGARLGSGEVDAGSPYLMDAVAAAYIGFSVFGAGKPNAFGTLLGALLMGTLLNGL 301

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMV 325
             M+F Y++  +       +  T    
Sbjct: 302 IMMDFPYYSQDIVKGIVLILALTLTYY 328


>gi|107028474|ref|YP_625569.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054]
 gi|116686469|ref|YP_839716.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
 gi|105897638|gb|ABF80596.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652184|gb|ABK12823.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 308

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 104/304 (34%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++Y + A GLSIV G L  ++      Y +GAY       ++  + W+ + V
Sbjct: 30  IVNGIGVGMLYFLLAVGLSIVFGLLRFVNFAHGAFYLLGAYLCY-QALQWSANFWVALAV 88

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ GA   I+    L+          ++ +     +L +   +  G  G  V      
Sbjct: 89  VPLVVGAFAWIVEKLVLRHVYAQQHEFHILATVGLALVLQECAILAWGPLGDNVPPPDAL 148

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  +              +Y  +  +V+     L+A +   L  T + +  R   ++ +
Sbjct: 149 NGVVI----------WGGFVYPKYRLFVIAFTAVLAALLWWVLEGTRLGSTVRAGSESTE 198

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       FA+ +A   +AG   A  R        +      V+ +V    M
Sbjct: 199 MVSLLGINVTRVFSLVFALGAATAALAGVLAAPIRGVDPFMGIEALGVAFVVVVVGG--M 256

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +         ++  V  L   +              +      ++ +A+  V+L+R + 
Sbjct: 257 GNFLGALVGGLLVGIVQSLMSTL--------------WPEGARLMIYVAMAAVLLLRPNG 302

Query: 339 LLRL 342
           LL  
Sbjct: 303 LLGR 306


>gi|17987674|ref|NP_540308.1| ribose ABC transporter permease [Brucella melitensis bv. 1 str.
           16M]
 gi|17983389|gb|AAL52572.1| ribose transport system permease protein rbsc [Brucella melitensis
           bv. 1 str. 16M]
          Length = 341

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 87/301 (28%), Gaps = 17/301 (5%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      S   + ++  +     + A G + V+ S G L L+     A  A   ++  + 
Sbjct: 46  IANPNFISIDNLLNVATRSAFIAIIALGATYVI-SSGGLDLSVGAMVAFVASIMILFMNS 104

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             ++  +L+ ++A++                     I   I +     I           
Sbjct: 105 GMIADPVLMLIAAVMLALVVGAACGLLNGIITTVGGIEPFIATLGTMGIYRGLTTW---- 160

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                         T+R+      +  ++    + +   ++ +   +A     L RT   
Sbjct: 161 -------LSQGGAITLRNPEIQSLYRPAYFGSVLGVPVPVIVIFVTAALAAFVLYRTRYG 213

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N+        ++   +  AF +    + +A   +       S       E  
Sbjct: 214 RHIIAVGSNEDVARYSGISVKKVRTIAFVIQGLCVAVAVLLYVPRLGSTSATTGLMWELQ 273

Query: 268 IVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V+      GG+  +        IL  +  +    +F     L     +  +    
Sbjct: 274 AITAVVVGGTALRGGVGRIWGTICGAFILEIIGNIMLLSSFVSEYLLGAIQGAIIIIAML 333

Query: 323 L 323
           +
Sbjct: 334 V 334


>gi|331696087|ref|YP_004332326.1| monosaccharide-transporting ATPase [Pseudonocardia dioxanivorans
           CB1190]
 gi|326950776|gb|AEA24473.1| Monosaccharide-transporting ATPase [Pseudonocardia dioxanivorans
           CB1190]
          Length = 827

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/298 (14%), Positives = 86/298 (28%), Gaps = 29/298 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             ++ L  +   L   L      +   I  +   + +    A G ++ +   G + L+  
Sbjct: 521 MAMVALAVLGLGLWTSLTSSFYLTTPSIAGLLALVAVLGFVALGQTVALMI-GAVDLSVG 579

Query: 72  IAYA--IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 + A S+ +      L   L   +   I  A G++        R + + +ATLI 
Sbjct: 580 PLMGFVVVAESFFLTAESMPLDRVLGWVLLFAIPLAVGLVNWALVDVVRMNAI-VATLIT 638

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
               Q + +  +P   G                +           +     I    +++ 
Sbjct: 639 YIALQALSLVLRPQPGG----------------LFDSRITEALTFTLGPVPIAFILMVIV 682

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              +   +    RRT    A R++    +            +L  F + S   G+A  F 
Sbjct: 683 AAGMQFWL----RRTRTGIALRSVGSEPERARLNGLGAPRLRLVGFLLCSLLAGLAALFL 738

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
            A      P          + + V     I GG  S      A  ++   +     + 
Sbjct: 739 LAQVGSGDPTSGVDYTLTSISAAVIGGASIFGGRGSFVGTIAAALLVTQAIGAVTFLG 796


>gi|288922312|ref|ZP_06416506.1| inner-membrane translocator [Frankia sp. EUN1f]
 gi|288346337|gb|EFC80672.1| inner-membrane translocator [Frankia sp. EUN1f]
          Length = 346

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 49/319 (15%), Positives = 100/319 (31%), Gaps = 23/319 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +     V   +      A    + I  + +   I  + A G ++V+     + L+     
Sbjct: 32  IVFALAVLVAVTAGVRPAFVHSQSIRDILLGAAIVAVLAVGQTVVM-ITRSVDLSVGSIL 90

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + AY+   + S +     +L  V  M  GAC  ++    ++F      + TL    +F+
Sbjct: 91  GLSAYAAGTVLSDHPGLPVVLALVLGMAVGACCGVINGLLVRFGNVPALVVTLGTLYMFR 150

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +   W                   G  + +      F        + + Y+++    + 
Sbjct: 151 GVAYLWAD-----------------GEQIYADELPGGFLKLGTASLLGVPYLVVIALIVM 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + + LR   +      +  +          +    L AF VS    G+AG  FAA   
Sbjct: 194 VVVGVVLRNYPVGRQLYAMGSSPPGARLAGIPVGRRLLGAFVVSGTLAGLAGVLFAARFG 253

Query: 255 RI-----SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            I     +          +V  + + GG+ ++   A    +L  +      +N   F   
Sbjct: 254 TIDASAGNGYELNVVAAAVVGGVAVAGGVGTVWGAALGALLLTTISSALAVLNINQFWQQ 313

Query: 310 LKFDCSFNMRHTTLMVIAL 328
                   +      +IAL
Sbjct: 314 AIVGALILLAIGIDRLIAL 332


>gi|261750354|ref|ZP_05994063.1| branched-chain amino acid ABC transporter, permease [Brucella suis
           bv. 5 str. 513]
 gi|261740107|gb|EEY28033.1| branched-chain amino acid ABC transporter, permease [Brucella suis
           bv. 5 str. 513]
          Length = 282

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 104/278 (37%), Gaps = 14/278 (5%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+  +  L +       L  +  ++    +G       + ++  +I+   +    L +V 
Sbjct: 1   MTELTQPLPQTRHSYAGLIGIVAIIAASVVGWFLFPDNL-ALLTRIIAIALLVLSLDLVT 59

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           G  G+ +L     +  GAY   I  + +      L+  +  +     G++ G   L+  G
Sbjct: 60  GYCGIATLGHAALFGAGAYGAGIAAAHFGVTDPILMTVIGLLAGAVTGLVSGAVILRATG 119

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
               + ++ +  +F     K    T G  G+         G               F +Y
Sbjct: 120 LAQLVLSIAVVHLFHEAANKASGWTGGSDGLSGISPDPIFGI------------FEFDLY 167

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              +Y   + +  +S   + ++ R+      R ++++     ++  ++  A+L  + +S 
Sbjct: 168 GRTVYIYAVILLLISFIFLRYVVRSPFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISG 227

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           A  G+ GA  A S   +  D   F+ +   + +++LGG
Sbjct: 228 AVAGIGGALNAISTQVVGLDSLSFTMSAEALVMLVLGG 265


>gi|302540973|ref|ZP_07293315.1| putative ribose ABC transporter, permease protein [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302458591|gb|EFL21684.1| putative ribose ABC transporter, permease protein [Streptomyces
           himastatinicus ATCC 53653]
          Length = 344

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 49/305 (16%), Positives = 99/305 (32%), Gaps = 24/305 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           S+        +  +    V+  L  ++      + + +  + +   I V+ A G S+VV 
Sbjct: 20  SLVDAVFRAREISIAGALVLLVLFTWVAEPRFLNDQGVKDLLLNAAILVLLAVGQSVVV- 78

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
               + L+      + A++     S     +  ++ +  ++   CG++ G      +   
Sbjct: 79  ITRNIDLSVGSVVGLSAFACGKFVSGTDHGVLTVLLLGVVVGAVCGLVSGSLVSFGKVPA 138

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           L + TL M  I Q +   W                   G  + +               +
Sbjct: 139 L-VVTLGMLYIIQGLDYWWAQ-----------------GEQINAADVPQSVLDLGSGSVL 180

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            + Y+ L    + A     LR          I  + +A       I    L+A+  S A 
Sbjct: 181 GLPYLPLISIAVLAGTAYVLRTYRSGRELYAIGSSPEAARLAGVPIRRRVLAAYLFSGAV 240

Query: 242 IGMAGAFFAASRDRISPDMFKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVE 296
            G AGA + A    +  D     E      ++V  + I+GG  ++   A    +L  +  
Sbjct: 241 SGFAGALWLARFGTVVADNAHGWELTVVSAVVVGGVAIVGGTGTVWGAALGALLLTTIGS 300

Query: 297 LCCGM 301
               +
Sbjct: 301 ALAVL 305


>gi|255292340|dbj|BAH89461.1| ABC transporter, permease protein [uncultured bacterium]
          Length = 316

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/319 (13%), Positives = 109/319 (34%), Gaps = 27/319 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +  ++  + A GL+++   +G+L+      Y +GA+    +        W  + ++
Sbjct: 10  LNGVLFGMLLFLMASGLTVIFSMMGVLNFAHASFYMLGAFFGFEISRHV--GFWPGLVIA 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            ++ G  GM++    L+    +  +A L+ +     I+ +   +  GK  +         
Sbjct: 68  PVLVGGIGMLVERYGLRTVHKHGHVAELLFTFGLTFIIEELVQMIWGKLAVDYRVPPL-- 125

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                  + F  F      Y  F  + LL    +  +++L ++RT +    +    + + 
Sbjct: 126 -------LDFPAFTIFSTEYPAFKIFELLTSIAIFLALLLVIKRTRVGLVVQAALSHPEM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L   +    +  F V +    +AG     +    +         + V+ +V    + 
Sbjct: 179 VGMLGHNVDRIFMLVFGVGAGLAAVAGVIAGPALVTQANMAQSLGPILFVVVVVGG--LG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLL--------------KFDCSFNMRHTTLMV 325
           SLS    A+ ++  +       +                       ++ +       +  
Sbjct: 237 SLSGAFVASLLIGLLQTFAVASDASLAGLFGELTGDSALAAYVGDVWNVTVAQLSAVMPY 296

Query: 326 IALFLVILMRSHSLLRLRT 344
           + L L+++ R   L+  R 
Sbjct: 297 LLLVLILIFRPRGLMGTRE 315


>gi|254466700|ref|ZP_05080111.1| inner-membrane translocator [Rhodobacterales bacterium Y4I]
 gi|206687608|gb|EDZ48090.1| inner-membrane translocator [Rhodobacterales bacterium Y4I]
          Length = 287

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/274 (8%), Positives = 71/274 (25%), Gaps = 10/274 (3%)

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            +    L +    +  L +P   + + A  ++      +F     A   + +      + 
Sbjct: 14  MFQSAGLSAGPLPTALLALPFGILGTIALALVTDRTVYRFYRQQKAKPVIFVMVSLGVMF 73

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +    +                        +        +  +      ++    + A++
Sbjct: 74  LMNGIVRFIIGPGDQRFTDGERFVISARTFKQMTGLQEGLAIKTTEALTVITAVIVVAAL 133

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L +T    + R   DN+              +  + + +A   +AG  +   +    
Sbjct: 134 FWFLNKTRTGKSMRAYSDNEDLALLSGINPERVVMYTWMIVAALATIAGVLYGLDKSF-- 191

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309
                F   + + +  I+GG+ +         I+             +            
Sbjct: 192 KPFTYFQLLLPIFASAIVGGLGNPIGAIAGGFIIAFSEVTITYAWKKVLTYGLPDSLAPD 251

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                        +    L +V+L +   L + +
Sbjct: 252 GLVQLLSTDYKFAVSFAILIVVLLFKPTGLFKGK 285


>gi|115351558|ref|YP_773397.1| inner-membrane translocator [Burkholderia ambifaria AMMD]
 gi|115281546|gb|ABI87063.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia ambifaria AMMD]
          Length = 339

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 90/313 (28%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L         L         +     ++  QI   V+ + G++ V+   G + L+     
Sbjct: 38  LAGALAAMIALFSALSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAG-IDLSVGSVL 96

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +   ++         +   ++ A G + G  ++ +R       +L + E  +
Sbjct: 97  ALAASMVSVAALKWQWGPLPAALIGIAVATATGSLTGAITVGWRIPSFI-VSLGVLEAAR 155

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  +         G                      F        + +    L    + 
Sbjct: 156 GVAYQLTNSRTAYIGD--------------------AFDFLSNPIALGISPAFLIAVAVM 195

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    L RT        I  N++A           K+  FA+  A  G+A  F  +  +
Sbjct: 196 IAAQFVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKILVFALMGALAGLASLFQISRLE 255

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +      +        
Sbjct: 256 AADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGANEPTKR 315

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 316 IITGAVIVVAVVL 328


>gi|332163467|ref|YP_004300044.1| sugar transport system permease protein [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|325667697|gb|ADZ44341.1| sugar transport system permease protein [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330861685|emb|CBX71859.1| xylose transport system permease protein xylH [Yersinia
           enterocolitica W22703]
          Length = 394

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 57/355 (16%), Positives = 106/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  +AV+     F   GA  S + I ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 33  MLAAIAVIMLFFTFTTEGAYLSARNISNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 91

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +   +  I     G  + L I V+  +    G   G      +               
Sbjct: 92  MGLLGGAAAIFDVWLGWPLPLTIVVTLGLGLVLGAWNGWWVAYRKVPSFIVTLAGMLAFR 151

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+ +     +   + R  +   
Sbjct: 152 GILIGITNGTTVSPTSNAMSQIGQSYLPNGLGFGIGAIGLMLFVVWQWRRRSHRIRLGLP 211

Query: 171 RFPSSFVIYEIFMYYVL------------------LGMCFLSASIILWLRRTAISNAWRT 212
                  +    +  V+                  L +  L  + I    RTA       
Sbjct: 212 VTAPQGDVTRQTITAVIVLGAIYLLNDYRGVPTPVLILTALMLAGIFMATRTAFGRRIYA 271

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N  A       +   KL+ FA++   + MAG   ++     SP     +E   + + 
Sbjct: 272 IGGNIDAARLSGVNVERTKLAVFAINGLMVAMAGLILSSRLGAGSPSAGNIAELDAIAAC 331

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 332 VIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGAILLLAVWM 386


>gi|298293620|ref|YP_003695559.1| inner-membrane translocator [Starkeya novella DSM 506]
 gi|296930131|gb|ADH90940.1| inner-membrane translocator [Starkeya novella DSM 506]
          Length = 845

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 106/333 (31%), Gaps = 45/333 (13%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILI-YVMFAWGLSIVVGSLGLLS 67
           +    +    ++     L  ++       +   + +   I  V+ A     VVG    + 
Sbjct: 542 DWLVDLAPFASLAAVFALMAWVNPLTVSMFGLELLLGPAIALVLVALAQMFVVGGS-EID 600

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L       +     V+  +    + WL +   A+++G     +   +++ R     + TL
Sbjct: 601 LGVGAFAGL---VNVLSATLLVDTPWLGVL--ALVAGVLAYGLIGATIQLRRIPAIVVTL 655

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             S I+  +    +P   G A  +++    +    V +                      
Sbjct: 656 GASFIWIGVGYTLQPTPGGAAPEWLSAAFAWTIAEVPAT--------------------- 694

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +  ++  + L + R+ +    R   +N +A      + +   +  + V+S F   AG 
Sbjct: 695 LILIAVAGIVALAIDRSPLGVVLRGFGNNAQAMTLGGWSPLRYAVVRYMVASLFALAAGL 754

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
              A       +       I V ++V+     +GGM S   +      L  V  L   ++
Sbjct: 755 SLTAINTASDINAGGPFTLISVAAVVMGGCALIGGMISPLGVVAGALTLALVGALLGALS 814

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
                            +  +    L  ++++R
Sbjct: 815 VS------------TDYNAAVQGCLLLAMLVLR 835


>gi|229101424|ref|ZP_04232167.1| Ribose ABC transporter [Bacillus cereus Rock3-28]
 gi|228682000|gb|EEL36134.1| Ribose ABC transporter [Bacillus cereus Rock3-28]
          Length = 311

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 96/312 (30%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLVLIIVVITALNPAFIEISNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +              +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLA--MSVGLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|239817264|ref|YP_002946174.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239803841|gb|ACS20908.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 289

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 99/313 (31%), Gaps = 26/313 (8%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +        +       +I  M   GLS+ +G + +++L       +G +    +  R G
Sbjct: 1   MSLALLSSILIDGVAYAMILFMITVGLSMTMGLMRVVNLAHGAFAMLGGFLAATIPQRLG 60

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           + IWL   ++ ++ G   ++     L+       +  ++M+     +      +  G   
Sbjct: 61  VPIWLGFVLAIVLVGLVALLFERILLRRFYRRDDLDQMLMTIGLMFVATAAVNLLFGSTV 120

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             VA             +        F         V+     +   + L + +++    
Sbjct: 121 TSVALP----------ELFNGTVDLGFRSIPRHRLIVMACGLVVVCVLWLAVDKSSFGIR 170

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R   DN     ++         + F + +A   + G   A      S    K+   +I+
Sbjct: 171 VRAAVDNAPIARAIGIDTTKIYAATFVMGAALAALGGIAGAELLPMESTYASKYL--VIL 228

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           +++V +GG  +L     A  +L  V      M                   +    + + 
Sbjct: 229 LAVVAVGGNGNLFGSFFAALLLGIVETSMKYM--------------VPQLASAAFFLTMI 274

Query: 330 LVILMRSHSLLRL 342
           +V+L+R   L   
Sbjct: 275 IVLLVRPQGLFGR 287


>gi|91224788|ref|ZP_01260048.1| putative ABC transporter, membrane spanning protein [Vibrio
           alginolyticus 12G01]
 gi|91190334|gb|EAS76603.1| putative ABC transporter, membrane spanning protein [Vibrio
           alginolyticus 12G01]
          Length = 297

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 88/306 (28%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I  ++Y + A    ++  S  +++        IGA+          L  ++   +
Sbjct: 10  VINGVIVGMLYGVVAMCFVLIYKSTQVVNFAQGEFLLIGAWVCWAALVHLQLPFFIGFLL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G+ +    L+       I+ ++++               G + +        
Sbjct: 70  TLAFMMIFGIAVQTIVLRPLIGEPIISVIMVTIGLSMFFQALMKWIFGVSAVSYPQVFET 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +  E      L+    +  +   + + + +  A R    NQ+
Sbjct: 130 -----------NVVNIGGLNVEFAYILSLIFSMLIMGAFYWFFKFSKMGLAMRATAFNQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  +I      ++A+S+     AG                    I V   VILGG+
Sbjct: 179 VAQSLGISIKKVFAISWAISAMVSATAGIVIGIVNGVSDALS---IIGIKVFPAVILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +  +  L    +  Y              +       L +++  + + 
Sbjct: 236 DSVVGAIVGGITIGVLENLAEFFDSQYL--------QVGNLYNIAPFYVLLIILAFKPYG 287

Query: 339 LLRLRT 344
           L   + 
Sbjct: 288 LFGTKD 293


>gi|209546194|ref|YP_002278084.1| sugar ABC transporter ATPase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209539051|gb|ACI58984.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 333

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/317 (13%), Positives = 95/317 (29%), Gaps = 23/317 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K + +L L+ VV   +         +   +  +     I ++ A    + V     + 
Sbjct: 5   IRKRETLLFLIIVVMIAIFSTRAADFATPDNLAGIFNDTSILIILALAQ-MTVILTKSID 63

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A    +  ++ + Y     +++ + A++ GAC   +    +        + TL
Sbjct: 64  LSVAANLAFTGMAIAMMNAAYPDLPLVVLILMAIVIGACLGAINGFLVWALEIPPIVVTL 123

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I++ +                       G  V +      F S      + +  + 
Sbjct: 124 GTLTIYRGMAFVLSG-----------------GAWVNAHQMTPIFLSVPRTPILGLPVLG 166

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                +   + + LR T    +      N  A         + K  AF +S A  G++  
Sbjct: 167 WVGIIIVLLMYVLLRYTQFGRSAYATGGNPTAAVYAGIDTGWTKFLAFVLSGALAGLSSY 226

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
            + +       D+    E   V + V     I GG+ S++        L  +      + 
Sbjct: 227 LWVSRYAVAYVDIANGFELDSVAACVIGGISIAGGVGSVAGTVLGALFLGVIKNALPVIG 286

Query: 303 FYYFNSLLKFDCSFNMR 319
              F  +        + 
Sbjct: 287 ISPFTQMAISGTVIILA 303


>gi|83746541|ref|ZP_00943592.1| LivH [Ralstonia solanacearum UW551]
 gi|207743853|ref|YP_002260245.1| transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83726872|gb|EAP73999.1| LivH [Ralstonia solanacearum UW551]
 gi|206595253|emb|CAQ62180.1| transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 289

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 94/305 (30%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +  +   GLS+ +G +  ++L        G Y  V+L +R G+     +P+
Sbjct: 8   LFDGLAYGCLLFLIGIGLSVTMGLMHFINLAHGAFAMAGGYVCVVLMNRLGVPFLATLPI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + + A G ++     +       +  ++ S     + +       G +   V      
Sbjct: 68  AFLATAAVGFVLERTLYRRLYRASPLDQVLFSIALVFMAMAGATYIWGPSQQPVELP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L   +    + +    +  +++  +  L+A +   + RT      R   DN +
Sbjct: 125 -----EALRGQWSVFDTGLEVGRYRLFLVGVVVVLTALLGWLIERTRFGAQVRASVDNPQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +       FA+ S                     F     +  + +V +GG 
Sbjct: 180 ASAGLGINVGLVFSVTFALGSGL--AGLGGGLGIDVLGLDPAFPIKYMVYFLLVVAVGGA 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  +L                               ++   + L++++    
Sbjct: 238 GSIKGTLLAALVLGVFDVAGKYY--------------VPEVGAFVIYGLMVLLLVLFPGG 283

Query: 339 LLRLR 343
           LL  R
Sbjct: 284 LLGRR 288


>gi|284044093|ref|YP_003394433.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283948314|gb|ADB51058.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 292

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 91/304 (29%), Gaps = 24/304 (7%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y+        IY +   GL+++   +GL++         G ++  +      L   L++ 
Sbjct: 7   YLVDALSGGGIYALLTIGLALLFSVMGLMNFAYGELIMTGGFAMFL---LRDLPWPLMVA 63

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
              +      +I    + +       +  LI S     IL     +T G     V    +
Sbjct: 64  GVIVAVVVIALITERLAFRPLRGASPLTLLIGSFAVSVILQNAARMTVGPRAKGVEPYDW 123

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
              T               V  ++     +     L   +++ L+RT +    R   ++ 
Sbjct: 124 LDKT----------VSLGGVDVQMLDLVTIAVALALIGGLVVLLKRTQLGVQLRAAAEDF 173

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +    L         SAFA++     +A       +  +S  +      +I     ++GG
Sbjct: 174 EMAALLGVKSNRVIASAFAITGVLAAVAALMLVMKQGSVSVTIGSVPL-LIAFVGAVVGG 232

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           M SL   A    +L     +                          +   + +++  R  
Sbjct: 233 MGSLGGAALGGFLLGATTAVLDA----------ALPGDLAPFRDAFVFGLVIVMLATRPQ 282

Query: 338 SLLR 341
            L+ 
Sbjct: 283 GLVP 286


>gi|225569499|ref|ZP_03778524.1| hypothetical protein CLOHYLEM_05585 [Clostridium hylemonae DSM
           15053]
 gi|225161707|gb|EEG74326.1| hypothetical protein CLOHYLEM_05585 [Clostridium hylemonae DSM
           15053]
          Length = 327

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/314 (10%), Positives = 92/314 (29%), Gaps = 28/314 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L  + +V  + + +      S +   ++   +  Y + A G+++V+   G ++L+  
Sbjct: 17  QIVLFAIIIVIIIAMGIASPYFLSVRNAMNIVQYVSTYGIIAIGMTMVI-LTGGINLSVG 75

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
              A+  Y             W    +  +I G    ++   ++        IATL + +
Sbjct: 76  GTLALSVYVAAKCMLAGI--PWPAAILVCLIVGGMVGVVNGFAVAGLKIPPLIATLAVEQ 133

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           I + I +                                 F +      + +   ++   
Sbjct: 134 ITRGIHLGLAQ-------------------GAPLHGFPEHFLNIGAGELLGIPMAVIWTI 174

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L      +L +T        +  N +A            +  +  +     +AG     
Sbjct: 175 GLFLFFGFFLAKTKTGRLIYAVGGNPEATRIAGINNKRLIMLVYIFAGLLCSIAGIIVVG 234

Query: 252 SRDRISPDMFKFSENIIVISIVI------LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
             + ++  + +  +   + + V+      +GG   +S       I+  +      +N   
Sbjct: 235 RMNSVAVSIAQGIDMQAITACVLGGASVTIGGKGKVSGTFLGILIMGLIQNSLDLLNVSA 294

Query: 306 FNSLLKFDCSFNMR 319
           +           + 
Sbjct: 295 YWQTFIQGLILLLA 308


>gi|239820002|ref|YP_002947187.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239804855|gb|ACS21921.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 342

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/316 (11%), Positives = 95/316 (30%), Gaps = 18/316 (5%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +   +     +   +              + S+     +  + A   + V+ + G + L
Sbjct: 26  TRQKLLAFASLIALLVFFSFASPQFLQTDNLVSILQSTAVNGVLAIACTFVIITAG-IDL 84

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +        A    ++ +  G+ + L I  +       G + G+   K +          
Sbjct: 85  SVGTLMTFCAVMAGVVLTYMGMPLALGIAAAIFFGALAGFVSGVLIAKLKIPPFIAT--- 141

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                    +    +  G + +    +  +   T             + I  + +   +L
Sbjct: 142 ---------LGMMMLLKGLSLVISGTKPIYFNDTPDFPAISQDSLIGYFIPSLPIPNAVL 192

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  ++ +  + L +T +      +  N++A         F K+  + VS    G+AG  
Sbjct: 193 ILFLVAVAASIVLNKTILGRYTFALGSNEEAVRLSGVNTDFWKIVVYTVSGGICGIAGLL 252

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            A+  +   P + +  E   + ++VI      GG  ++        I+  +      ++ 
Sbjct: 253 IASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGTGTIVGTIIGAFIMSVLTNGLRILSV 312

Query: 304 YYFNSLLKFDCSFNMR 319
                 +       + 
Sbjct: 313 AQEWQTVVTGVIIILA 328


>gi|218779555|ref|YP_002430873.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218760939|gb|ACL03405.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 292

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 47/291 (16%), Positives = 91/291 (31%), Gaps = 13/291 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+        IY + A G S +  +  L++        +GA   V L    GL + L  
Sbjct: 7   QYLFGGITNGAIYAVIALGFSTLYSATDLINFAQGEFVMLGALLLVTLWLNLGLPLPLAF 66

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +  +  G  G+I    +++       I  +I++      L     +  G          
Sbjct: 67  VLVVLAVGLAGIIFERLAIRTVRKPDPIVLVIITVGASIFLRGLGMVGWG---------- 116

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + S  +      +         ++++ +  L A++  + ++T    A      N
Sbjct: 117 -RDPLAIPSFFKLDSIEIAGAYLLPQSLFIVITVTVLVAALTFFYKKTLTGKAMSACAIN 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +KA   L        L AFA+++    +AG   A                    ++  LG
Sbjct: 176 KKAASLLGIGTERMTLMAFALATGLGAVAGVMIAPITMATYDMGSMLGLKGFCAAM--LG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           G+ SL        +L     L  G         + F     + +     I 
Sbjct: 234 GLGSLWGALIGGLLLGIAEALGVGFVSSGLKDAIAFLLLLLILYIRPTGIL 284


>gi|229542799|ref|ZP_04431859.1| inner-membrane translocator [Bacillus coagulans 36D1]
 gi|229327219|gb|EEN92894.1| inner-membrane translocator [Bacillus coagulans 36D1]
          Length = 314

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 98/312 (31%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  ++  +++ +   +  +   + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 18  LLAFILLFIVVAILNPSFIAPLNLLNLLRQVSINALIAFGMTFVI-LTGGIDLSVGSTLA 76

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     +     L+  L I +SA+I    G + GL   K +          M+     
Sbjct: 77  LSSALMAGMIVAG-LNPILAIVLSALIGALLGAVNGLFITKGKVAPFIATLATMTI---- 131

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                               +Y  G  +  L     F      Y + +    + M     
Sbjct: 132 --------------YRGLTMVYTNGNPITGLGDNLAFQLFGRGYFLGIPVPAITMVITFF 177

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L +T+       +  N+KA       +   K   ++++     +AG+   +  + 
Sbjct: 178 ILWFILHKTSFGRKTYAVGGNEKAALVSGIKVDRVKWLIYSLAGLLAALAGSILTSRLNS 237

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 238 AQPTAGTSYEMDAIAAVVLGGTSLSGGKGRIFGTLVGALIIGTLNNGLNILGVSSFYQQV 297

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 298 VKGVVILIAVLI 309


>gi|145588198|ref|YP_001154795.1| inner-membrane translocator [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145046604|gb|ABP33231.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 294

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 103/299 (34%), Gaps = 26/299 (8%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           +    Y + + GL+++ G L +++ +    + +GA    + G  +G++ W+++ +S +I 
Sbjct: 20  VNGSFYAILSLGLAVIFGLLNVINFSHGAMFMLGAIVTWMAGQYFGINYWVMLLLSPLIV 79

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
           G  G+++    L+       +  L+++      +        G +G+         G T 
Sbjct: 80  GLVGIVIERLLLRHLYQLDHLYGLLLTFGLTLFIEGVLRSIYGASGLAYNTPEALGGAT- 138

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                       F++   +  +V+     +  +    + +T+I    R   +N K   + 
Sbjct: 139 ---------DLGFMVLPNYRAWVVFASLTVCFATWYIIEKTSIGAYLRAGTENPKLVQAF 189

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
                      +    A    +G   A         +   +  IIV ++V++GGM S+  
Sbjct: 190 GVNFPLMTTLTYGFGVALAAFSGVLAAPIIQI--SPLMGSNLIIIVFAVVVIGGMGSIM- 246

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                                           +    +T++   + +V+L R   L   
Sbjct: 247 -------------GSILTGLGLGLIEGLTKVFYPQASSTVVFAIMVIVLLFRPAGLFGR 292


>gi|300310397|ref|YP_003774489.1| ribose/xylose/arabinose/galactoside ABC transporter permease
           [Herbaspirillum seropedicae SmR1]
 gi|300073182|gb|ADJ62581.1| ABC-type ribose/xylose/arabinose/galactoside transport system,
           permease component protein [Herbaspirillum seropedicae
           SmR1]
          Length = 328

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 48/316 (15%), Positives = 95/316 (30%), Gaps = 26/316 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +     VV  LL+ L      +     ++  Q+ I  + A G+S V+   G + L+  
Sbjct: 29  LALPLAGLVVVSLLMGLASDNFFTLSNWFNVLRQVSIVGILAVGMSFVI-LTGGIDLSVG 87

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
            A A+       L    GL   L +     ++   G++ G      R   + +       
Sbjct: 88  AAMALAGTISAGLIVNSGLPAPLALLCGVGLATCIGLLNGALVAWGRMPAIIVT------ 141

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                            G+ +     +  + +   I +F      ++    +  +++   
Sbjct: 142 ---------LATMGVARGVGLIYSGGYPISGLPGWISWFGVGRIGMVPVPVILMLIV--- 189

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
              A   L L+RTA       I  N+ A           KL+ +A+S    G+A      
Sbjct: 190 --YALAWLLLQRTAFGRHVYAIGGNEMAARLSGVKTTRIKLAVYAISGFTSGLAAIILTG 247

Query: 252 SRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                 P+     E   + ++V     I GG   +        +L  +      M    +
Sbjct: 248 RLMSGQPNAGVGFELDAIAAVVLGGTAIAGGRGLVVGTLIGAVLLGILNNGLNLMGINPY 307

Query: 307 NSLLKFDCSFNMRHTT 322
              +       +    
Sbjct: 308 LQDIIRGVIILLAIYI 323


>gi|171186033|ref|YP_001794952.1| inner-membrane translocator [Thermoproteus neutrophilus V24Sta]
 gi|170935245|gb|ACB40506.1| inner-membrane translocator [Thermoproteus neutrophilus V24Sta]
          Length = 322

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/317 (13%), Positives = 94/317 (29%), Gaps = 16/317 (5%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                  + S  I   IYV+ + GL++   +  + S        +GAY          + 
Sbjct: 4   FGVDYNTLASAIIFSNIYVLLSLGLNLTYITTKIPSFAHGDLATVGAYISYFAIYFLLMP 63

Query: 92  -------IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                     +     +++ A G +  L  L      +     I   +  +  + +    
Sbjct: 64  YLSQLGIPVNVYLTFPLVALAGGAVAVLSYLLVFRPMIKRGAGITPLMIASFGLHFVIFA 123

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
           +           Y + T    L R+             +    L +   +A + + L RT
Sbjct: 124 SVALAADYVQSRYGVLTRNVLLSRWELIWPGTDFLTSSLINTTLSVVVTTALLYVLLYRT 183

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                 R   DN     ++   +      A+ +  A  G+AG + A        +   + 
Sbjct: 184 RYGVIMRASIDNLYLARAVGINVERVFAVAWLLIGAVTGIAGVYMAMYYPM--SEELGWL 241

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
              +V    ++GG++++        ++   + L         N   +F  +         
Sbjct: 242 RLALVFVASVVGGLSNIYGAVLGGYVVGLSMVLGAAYILTPLNIPTEFQLAIP------- 294

Query: 325 VIALFLVILMRSHSLLR 341
              +  ++L     L+ 
Sbjct: 295 FAFVIAILLFAPQGLVG 311


>gi|219849301|ref|YP_002463734.1| inner-membrane translocator [Chloroflexus aggregans DSM 9485]
 gi|219543560|gb|ACL25298.1| inner-membrane translocator [Chloroflexus aggregans DSM 9485]
          Length = 293

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 107/304 (35%), Gaps = 24/304 (7%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            S      I+ + A G  ++  S  +++        IGAY    +  ++GL   + + V+
Sbjct: 9   LSGIANGAIFALVALGFVLIYKSSDVINFAQGELLLIGAYLTYAMVEQFGLWWPIGVVVA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++   G+++    L+       I+ ++++    ++L        G         L   
Sbjct: 69  VVLAAVVGVLIEQLVLRPLIGEPVISVIMVTIGLSSLLRAIVGAIWGVTPRPAPQFLPTD 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
             T+                 +   +           + L+ R +    A R + D+Q+A
Sbjct: 129 TVTILG-----------ANVGVDRLWAFALAIIFFVILTLFFRFSREGIAMRAVADDQQA 177

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             S+  ++      A+A+++    + G    +    +S  + +     +V  +VILGG+ 
Sbjct: 178 ALSMGISVKKVWAVAWAIAAITAAVGGILLMSIFGGVSGTIGRVGL--LVFPVVILGGLD 235

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        I+  +     G+    +                   + L +++L+R + L
Sbjct: 236 SIPGAIIGGLIIGLLQSFAGGLLPPEWGLGEVAP-----------FVILLIILLVRPYGL 284

Query: 340 LRLR 343
              R
Sbjct: 285 FGQR 288


>gi|78066217|ref|YP_368986.1| ABC sugar transporter, inner membrane subunit [Burkholderia sp.
           383]
 gi|77966962|gb|ABB08342.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia sp. 383]
          Length = 339

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 95/320 (29%), Gaps = 28/320 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+ Y  +   LA +  L   L         +  ++  QI   V+ + G++ V+   G + 
Sbjct: 32  LSNYLGLAGALAAMIALFSVLSSHFLTYDTF-STIANQIPDLVVMSVGMTFVLIIAG-ID 89

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+ A    +   ++         +   ++   G + G  ++ +R       +L
Sbjct: 90  LSVGSVLALAASMVSVAALKWQWGPLPAALIGIAVATMTGALTGAVTVGWRIPSFI-VSL 148

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            + E  + +  +         G                      F        + +    
Sbjct: 149 GVLEAARGLAYQLTNSRTAYIGD--------------------AFDFLSNPIALGISPAF 188

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    +  +    L RT        I  N++A           K+  FA   A  G+A  
Sbjct: 189 LIAVAVMIAAQFVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKILVFASMGALAGLASL 248

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
           F  +  +   P+     E  ++ ++VI     +GG  S+        I+  +      + 
Sbjct: 249 FQISRLEAADPNAGVGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIG 308

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
                  +       +    
Sbjct: 309 ANEPTKRIITGAVIVVAVVL 328


>gi|87301714|ref|ZP_01084554.1| putative urea ABC transporter [Synechococcus sp. WH 5701]
 gi|87283931|gb|EAQ75885.1| putative urea ABC transporter [Synechococcus sp. WH 5701]
          Length = 385

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/203 (10%), Positives = 57/203 (28%), Gaps = 9/203 (4%)

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                  +  T    ++        +       +++L    L  +   +L ++      R
Sbjct: 183 PWFGPRNIDVTAPKWLQGSWGMIGTIELPGLRIFIILLSALLLLATYWFLNKSVWGLRIR 242

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +  N++    L           F + S   G+AG                 +  +    
Sbjct: 243 AVTQNRQMSNCLGIPTDRVDSITFGIGSGLAGVAGCAITLLGSV--GPNLGAAYIVSCFM 300

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF-------NSLLKFDCSFNMRHTTLM 324
           +++LGG+ +L     A  +L  +  +                   +    +       L+
Sbjct: 301 VIVLGGVGNLLGTVIAAILLGIIQSVIGSGTLLTIFPDMPEAARGVTEFFATTSMSLVLV 360

Query: 325 VIALFLVILMRSHSLLRLRTPSN 347
            I + + +  R + +   +  S 
Sbjct: 361 FIFIIVFLQFRPNGMFPQKGRSV 383



 Score = 36.0 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 32/79 (40%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I        + ++ A GL+IV G +G+++L       +GAY   ++ S +     ++  +
Sbjct: 8   ILDGLSIGSVLLLAATGLAIVFGLMGVINLAHGEFMMLGAYVTYVVQSAFKPMGGVIFEL 67

Query: 99  SAMISGACGMIMGLPSLKF 117
              +S     I+       
Sbjct: 68  YFPVSLVLAFIVTGLIGVL 86


>gi|217966828|ref|YP_002352334.1| sugar ABC transporter ATPase [Dictyoglomus turgidum DSM 6724]
 gi|217335927|gb|ACK41720.1| Monosaccharide-transporting ATPase [Dictyoglomus turgidum DSM 6724]
          Length = 335

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 98/313 (31%), Gaps = 23/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +     ++ L++ L      S + +  + +   I  + A G  +V+   G + L+     
Sbjct: 25  IIFPLFLFGLIIALRNPYFISWENLRYIFLDASILTIVAIGEMMVI-LTGGIDLSVGSNL 83

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+   +  ++   +     +L P+  ++ G     +    +        IATL    IF+
Sbjct: 84  ALTGMTVSMIYRDFHNFPVILAPLIGILIGGVCGAINGLFVAKGKVIPIIATLSTMYIFR 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+                  +   G  V +      +     +  + +  +++    + 
Sbjct: 144 GIVY-----------------IISGGRWVNAHEMPEGYKLLTRVEILGIPILVIYALIVF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L   AI  +   + +N ++   +    +      + +S    G++G  + +   
Sbjct: 187 LFFYYLLNYKAIGRSIYAVGNNPQSAIYIGINKVKVLFLVYLISGILAGLSGVLYTSRFA 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                     E   + ++VI      GG   +  +     +L  +V     M    F  L
Sbjct: 247 SAESSAAIGFELSAISAVVIGGVKTTGGSGKIGGVVLGALLLTMIVNGLNVMKISPFYKL 306

Query: 310 LKFDCSFNMRHTT 322
                 F +    
Sbjct: 307 ALQGLMFLIAVIV 319


>gi|16265174|ref|NP_437966.1| putative sugar uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|307308839|ref|ZP_07588527.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
 gi|307320331|ref|ZP_07599749.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|15141314|emb|CAC49826.1| putative sugar ABC transporter [Sinorhizobium meliloti 1021]
 gi|306894053|gb|EFN24821.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|306900644|gb|EFN31256.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
          Length = 336

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 85/305 (27%), Gaps = 17/305 (5%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           ++  +      S   + ++  +     + A G + V+ S G L L+     A  A   ++
Sbjct: 36  IVGAMVNPNFISLNNLANVATRSAFIAIIAVGATFVI-SAGDLDLSVGSMVAFVASLMIL 94

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
             +   ++   L+  +A++       +   +         I   I +     I       
Sbjct: 95  FMNSGVIADPALMLTAAVLFAVVAGSVCGLANGLITTVGRIEPFIATLGTMGIYRGLTTW 154

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
                             T+R       +  ++    + M   +  +  ++A     L R
Sbjct: 155 -----------LSQGGAITLREPELQELYRPAYFGSILGMPVPIAIILAVTAVAAFILYR 203

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T        +  N          +   +  AF +    + +A   +       S      
Sbjct: 204 TRYGRHVVAVGSNSDVARYSGIAVNRVRTIAFVIQGLCVAVAVLLYVPRLGSTSATTGIL 263

Query: 264 SENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            E   + ++V+      GG   +        IL  V  +    NF     +     +  +
Sbjct: 264 WELQAITAVVVGGTALKGGAGRVWGTICGAFILELVGNIMLLSNFISEYLIGAMQGAIII 323

Query: 319 RHTTL 323
               +
Sbjct: 324 IAMLV 328


>gi|319792122|ref|YP_004153762.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315594585|gb|ADU35651.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 343

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/316 (11%), Positives = 95/316 (30%), Gaps = 18/316 (5%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +   +     +   +              + S+     +  + A   + V+ + G + L
Sbjct: 27  TRQKLLAFASLIALMVFFSFASPQFLQTDNLVSILQSTAVNGVLAIACTFVIITAG-IDL 85

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +        A    ++ +  G+ + L I  +       G I G+   K +          
Sbjct: 86  SVGTLMTFCAVMAGVVLTYMGMPLALGIAAAIFFGALAGFISGVLIAKLKIPPFIAT--- 142

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                    +    +  G + +    +  +   T              +I  + +   +L
Sbjct: 143 ---------LGMMMLLKGLSLVISGTKPIYFNDTPGFTAISQDSLIGDLIPSLPIPNAVL 193

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  ++ +  + L RT +      +  N++A         F K+  + VS    G+AG  
Sbjct: 194 ILFLVAVAASILLNRTILGRYTFALGSNEEAVRLSGVNTNFWKVVVYTVSGGICGIAGLL 253

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            A+  +   P + +  E   + ++VI      GG  ++        I+  +      ++ 
Sbjct: 254 IASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGTGTIVGTIIGAFIMSVLTNGLRILSV 313

Query: 304 YYFNSLLKFDCSFNMR 319
                 +       + 
Sbjct: 314 VQEWQTVITGVIIILA 329


>gi|119718236|ref|YP_925201.1| inner-membrane translocator [Nocardioides sp. JS614]
 gi|119538897|gb|ABL83514.1| amino acid/amide ABC transporter membrane protein 2, HAAT family /
           amino acid/amide ABC transporter membrane protein 1,
           HAAT family [Nocardioides sp. JS614]
          Length = 697

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 55/280 (19%), Positives = 102/280 (36%), Gaps = 19/280 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
             +      Y M    L ++ G  G +SL       +GA +Y     +        + V+
Sbjct: 334 LLLVGTAATYAMVMLSLVLLTGYGGHVSLAQFTFAGVGALAYA----KLDEPNLFGLLVA 389

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           A I+   G ++ LP L+  G YLA++TL    +  + L+       G  G   A+RL  L
Sbjct: 390 AGIAAGVGALVALPVLRLTGLYLALSTLAF-GVLMDKLVFQADFAFGYNGTLHAERLSLL 448

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G    S   +    + F +       +L         I               +RD+  A
Sbjct: 449 GREFSSTGGYVLVMTVFFVLMALGLLLLRRGALGRLLI--------------AMRDSPAA 494

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   + + +++ F +S+   G+AG  FA  R  I    F+   ++ ++ + ++ G+T
Sbjct: 495 CGTLGLDMRWFRVALFGLSAGMAGLAGGLFAGLRGTIGAADFQLFNSLPLLLLAVVCGVT 554

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           S++  A     L+ +  L                      
Sbjct: 555 SVTGAALGGVGLMLLPVLQSSRPELAGLVFAVLGFGAVAL 594



 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 77/301 (25%), Gaps = 20/301 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +          Y + A GL +   +  + ++       + A+++     R G+  WL +
Sbjct: 9   SFTILGLFTGAAYAIAASGLVLTYTTTRVFNIAHGAFGMVMAFTFWDFSQRQGMPTWLAL 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +   +                        L    +  ++++                  
Sbjct: 69  TLVLGVVAPGIGWF--------VQRFVTRGLGEGPVSVSLVVTVGLFVGLIGVAQYIWPP 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                TV   +                   +     ++A++ + L RT I  A R   DN
Sbjct: 121 A--PRTVPPFLPDDGIRIGSTYVTAHQVITIALSALVAAALYVLLNRTRIGTAMRASVDN 178

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                            ++A+  +   +AG            D+      I   +  +LG
Sbjct: 179 PVLLRLFGGRPDLVASLSWAIGISLAALAGILLTPVIGLSYYDLT--LLVINAYAAAMLG 236

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
            + SL         L  +            N               +  + LF+VI+   
Sbjct: 237 RLKSLPLTFVGAMGLGILQSFSVAYLPSEGN--------LAGLRAVVPALFLFVVIVAMP 288

Query: 337 H 337
            
Sbjct: 289 Q 289


>gi|241206392|ref|YP_002977488.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860282|gb|ACS57949.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 334

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 85/313 (27%), Gaps = 17/313 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  ++  L          + ++  +     + A G + V+ S G L L+     A
Sbjct: 26  FVALALLLIVGALVNPNFIGITNLANVATRSAFIAIIAVGATFVI-SAGDLDLSVGSMVA 84

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             A   ++L +   +    L+   A +       +   +         I   I +     
Sbjct: 85  FVASLMILLMNSGAIENPALMLTVAAVFTIVAGALCGLANGLITTVGRIEPFIATLGTMG 144

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I                         T+RS      +  ++      +   ++ +  ++A
Sbjct: 145 IYRGLTTW-----------LSQGGAITLRSADIQTLYRPAYFGNVAGIPVPIVVILAVTA 193

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L RT        +  N          +   +  AF +    + +A   +      
Sbjct: 194 VAAFILYRTRYGRHVVAVGSNSDVARYSGIAVNRVRTIAFVIQGLCVAIAVLLYVPRLGS 253

Query: 256 ISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            S       E   + ++V+      GG   +        IL  V  +    NF     + 
Sbjct: 254 TSATTGILWELQAITAVVVGGTALKGGAGRVWGTICGAFILELVGNIMLLSNFISEYLIG 313

Query: 311 KFDCSFNMRHTTL 323
               +  +    +
Sbjct: 314 AIQGAIIIIAMFV 326


>gi|30018846|ref|NP_830477.1| ribose ABC transporter permease [Bacillus cereus ATCC 14579]
 gi|206967863|ref|ZP_03228819.1| ribose ABC transporter, permease protein [Bacillus cereus AH1134]
 gi|218235529|ref|YP_002365460.1| ribose ABC transporter, permease protein [Bacillus cereus B4264]
 gi|218895718|ref|YP_002444129.1| ribose ABC transporter, permease protein [Bacillus cereus G9842]
 gi|228919517|ref|ZP_04082881.1| Ribose ABC transporter [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228963764|ref|ZP_04124905.1| Ribose ABC transporter [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|229042525|ref|ZP_04190270.1| Ribose ABC transporter [Bacillus cereus AH676]
 gi|229095315|ref|ZP_04226307.1| Ribose ABC transporter [Bacillus cereus Rock3-29]
 gi|229114264|ref|ZP_04243685.1| Ribose ABC transporter [Bacillus cereus Rock1-3]
 gi|229126095|ref|ZP_04255117.1| Ribose ABC transporter [Bacillus cereus BDRD-Cer4]
 gi|229143390|ref|ZP_04271821.1| Ribose ABC transporter [Bacillus cereus BDRD-ST24]
 gi|229149003|ref|ZP_04277248.1| Ribose ABC transporter [Bacillus cereus m1550]
 gi|229159744|ref|ZP_04287752.1| Ribose ABC transporter [Bacillus cereus R309803]
 gi|229171450|ref|ZP_04299034.1| Ribose ABC transporter [Bacillus cereus MM3]
 gi|229188872|ref|ZP_04315905.1| Ribose ABC transporter [Bacillus cereus ATCC 10876]
 gi|296501420|ref|YP_003663120.1| ribose ABC transporter permease [Bacillus thuringiensis BMB171]
 gi|29894388|gb|AAP07678.1| Ribose transport system permease protein rbsC [Bacillus cereus ATCC
           14579]
 gi|206736783|gb|EDZ53930.1| ribose ABC transporter, permease protein [Bacillus cereus AH1134]
 gi|218163486|gb|ACK63478.1| ribose ABC transporter, permease protein [Bacillus cereus B4264]
 gi|218541644|gb|ACK94038.1| ribose ABC transporter, permease protein [Bacillus cereus G9842]
 gi|228594577|gb|EEK52363.1| Ribose ABC transporter [Bacillus cereus ATCC 10876]
 gi|228611988|gb|EEK69226.1| Ribose ABC transporter [Bacillus cereus MM3]
 gi|228623681|gb|EEK80499.1| Ribose ABC transporter [Bacillus cereus R309803]
 gi|228634543|gb|EEK91127.1| Ribose ABC transporter [Bacillus cereus m1550]
 gi|228640197|gb|EEK96596.1| Ribose ABC transporter [Bacillus cereus BDRD-ST24]
 gi|228657417|gb|EEL13233.1| Ribose ABC transporter [Bacillus cereus BDRD-Cer4]
 gi|228669284|gb|EEL24705.1| Ribose ABC transporter [Bacillus cereus Rock1-3]
 gi|228688174|gb|EEL42060.1| Ribose ABC transporter [Bacillus cereus Rock3-29]
 gi|228726878|gb|EEL78090.1| Ribose ABC transporter [Bacillus cereus AH676]
 gi|228795909|gb|EEM43376.1| Ribose ABC transporter [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228840160|gb|EEM85437.1| Ribose ABC transporter [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|296322472|gb|ADH05400.1| ribose ABC transporter permease [Bacillus thuringiensis BMB171]
          Length = 311

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 97/312 (31%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLVLIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +     +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMAV--GLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|83943123|ref|ZP_00955583.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
 gi|83846131|gb|EAP84008.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
          Length = 343

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/342 (12%), Positives = 97/342 (28%), Gaps = 48/342 (14%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS------------------ 80
           + +   +   Y + A GL+++ G+LG+++      + IGA+                   
Sbjct: 8   LLNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFCAVTLSKIFTLSHKASEPS 67

Query: 81  -------------------YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
                              +      + L   + + +   +     +   +     +  Y
Sbjct: 68  GVDFLGKPKYEDIPYIKDWFGETAGAWMLDWSVPLSILFAVPIMLAIGFVMERGLIKHFY 127

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                  +   F   ++  + I        +                   F  + +IY  
Sbjct: 128 KRPHADQILVTFGLAIVLQEVIKYFYGANPIPTSAPEAFRGSFDFGVMLGFDPNAIIYPY 187

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
           +          +   +  +L+ T      R    +++    L   I       F +++A 
Sbjct: 188 WRLIYFAFSAVIIGGVFAFLQFTTFGMVVRAGMADRETVGLLGINIDKRFTIMFGIAAAV 247

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AG  +A            F     V+ +V    M SL     A  +L  +       
Sbjct: 248 AGLAGVMYAPINSPNYHMGMDFLVLSFVVVVVGG--MGSLPGAVLAGFLLGILES----- 300

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
               F S+ +           ++ +   L++L R   L+  +
Sbjct: 301 ----FASMNEVKNILPGIDQIIIYVVAILILLTRPRGLMGRK 338


>gi|327192979|gb|EGE59894.1| putative branched-chain amino acid ABC transporter, permease
           protein [Rhizobium etli CNPAF512]
          Length = 287

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 88/303 (29%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y         GLS    I  +
Sbjct: 9   VDALAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMIGGYIASYAARDLGLSYAAAIIAA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + +    + +     +       +  ++M+      +I       G            L
Sbjct: 69  VIATIIIAIPLERFLYRRIYGAPELTQVLMTIGITFCVIGIANYAMGP----------TL 118

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T   +          F    +   +V+L    ++ S+   + RT+     R   D+   
Sbjct: 119 KTIPLAAALQGSADLGFRTIPVHRLFVILCGLMVAVSLWFAIDRTSFGVKLRASVDDAAM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FAV+       G   A          +     +  + +V +GG  
Sbjct: 179 AAALGVRTEIIYAVSFAVAVGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L  +      +   +                    +A+  +I +    L
Sbjct: 237 SIPGALIACLLLGAIDTTGRYLMPEFGE--------------FFFYLAVIAIICIFPRGL 282

Query: 340 LRL 342
              
Sbjct: 283 AGR 285


>gi|296534540|ref|ZP_06896958.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Roseomonas cervicalis ATCC 49957]
 gi|296265137|gb|EFH11344.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Roseomonas cervicalis ATCC 49957]
          Length = 318

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 93/303 (30%), Gaps = 23/303 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +++ D  L  L +V   +  +      S   + +M   I ++ +F+ G  +++   G + 
Sbjct: 1   MSRKDLGLAALLIVIGAITAVLNPLFLSTVNLLNMANLIGLFGIFSIGQGLII-ITGGID 59

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+    +A+    +V L   Y +     + +   +    G + GL   +       +   
Sbjct: 60  LSVGAMFALLGVIFVDLLVNYEIFWPYAVLIVLGLGLLLGALHGLLVTRLGMQPFVVTLC 119

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +             I  G A  Y  D     G      +  +               ++
Sbjct: 120 GL------------LIYRGAARYYTQDGTMGFGYAGDLDMLTWLASGRSFGIPHPFIALI 167

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +    +   +     R+        +  N++A            + A+ +     G++  
Sbjct: 168 VVAVIVGVLLH----RSVFGRYLYAVGRNEEAARHSGIDTRAVVIGAYLLGGLLAGLSTV 223

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGM 301
                   +SP  F     +  I+  +LGG        S+  I   T +L  +  L   +
Sbjct: 224 LLVFYTSSVSPSSFGNFYELYAIAAAVLGGCSLRGGEGSVLGIVLGTVLLQILQNLVNIL 283

Query: 302 NFY 304
              
Sbjct: 284 GIP 286


>gi|150376404|ref|YP_001313000.1| monosaccharide-transporting ATPase [Sinorhizobium medicae WSM419]
 gi|150030951|gb|ABR63067.1| Monosaccharide-transporting ATPase [Sinorhizobium medicae WSM419]
          Length = 336

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 80/300 (26%), Gaps = 17/300 (5%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                 S   + ++  +     + A G + V+ S G L L+     A  A   +I  +  
Sbjct: 41  VNPNFISLNNLANVATRSAFIAIIAVGATFVI-SAGDLDLSVGSMVAFVASLMIIFMNSG 99

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            ++   L+  +A++           +         I   I +     I            
Sbjct: 100 VIADPALMLTAAIVFAVAVGGACGLANGLITTVGRIEPFIATLGTMGIYRGLTTW----- 154

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                        T+R       +  ++      +   +  +  ++A     L RT    
Sbjct: 155 ------LSQGGAITLREPEIQELYRPAYFGSIFGVPVPIAIILAVTAVAAFILYRTRYGR 208

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               +  N          +   +  AF +    + +A   +       S       E   
Sbjct: 209 HVVAVGSNSDVARYSGIAVNRVRTIAFVIQGLCVAVAVLLYVPRLGSTSATTGILWELQA 268

Query: 269 VISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           + ++V+      GG   +        IL  V  +    NF     +     +  +    +
Sbjct: 269 ITAVVVGGTALKGGAGRVWGTICGAFILELVGNIMLLSNFISEYLIGAMQGAIIIIAMLV 328


>gi|121611555|ref|YP_999362.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121556195|gb|ABM60344.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 294

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 102/309 (33%), Gaps = 22/309 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      IY + A    ++    G+++       A+G ++  +  S++ L   + +  
Sbjct: 8   LVSAVSTGCIYGLVALAYLLIARPTGIINFAVGEWAALGGFAGYLALSKFELPYAVGMAA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +     G       ++   +  A     +  +   +++  + ++ G            
Sbjct: 68  VVIFMFFAGWATERTVVRPLIERHAPPLAPVLVLLGMLVVFRESLSLG---------FGP 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +V + + F RF            +++     + A+  L+  R+    ++  +  +++
Sbjct: 119 DPYSVPAGLGFGRFEFGLFAGAYQSLFIIATALTIFAAAWLFFERSLTGKSFAAVAIDRR 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +      +FA  +   GMAG   A +       M      I   + +++GG 
Sbjct: 179 VAALMGINLGRVTSMSFAGGAVVAGMAGLLSAPTTSV--HYMMGLPLAIQGFTALVIGGA 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             ++       +L  V +L                         + +I L + +L++   
Sbjct: 237 NRVAGALFGGLLLALVEQLTIRYLP-----------IAAGLSMGVPLIVLIVFLLVKPEG 285

Query: 339 LLRLRTPSN 347
           LL LR    
Sbjct: 286 LLGLRKERA 294


>gi|56421560|ref|YP_148878.1| branched amino acid ABC transporter permease [Geobacillus
           kaustophilus HTA426]
 gi|56381402|dbj|BAD77310.1| branched amino acid ABC transporter (permease) [Geobacillus
           kaustophilus HTA426]
          Length = 293

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 84/288 (29%), Gaps = 14/288 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      IY + A G  I     G+L+L       +GA    I     G+     I +
Sbjct: 11  LFSGLTVGSIYALVALGFVITYSVTGILNLAQGDFAMLGALFC-ITLVNNGVPFAAAIGL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +     G +    +++          +I++     +      +  G     +      
Sbjct: 70  SMLAVMVVGGLFERLAIQPARRSPVAVLIIITIGASFVFRGIALLVWGTDPYALRPFTGH 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V   +  ++             + ++      A++ L+  RT I  A      N  
Sbjct: 130 GALEVFGAVIQWQ-----------SVWAIVISLASFAALHLFFHRTYIGKAVAACVINPF 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   I    L A AVS+    +AG   A      +         +      ++GG+
Sbjct: 179 AARLMGIDIRKMSLGAIAVSAGLGALAGIVIAP--ISGASYDMGMMIGLKAFIAAVVGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           T+         ++  +     G     +   + F     +       +
Sbjct: 237 TNAPAAIAGAFLVGLLESFAEGYLSSGYKEAISFGLLLLVLFFMPNGL 284


>gi|134295614|ref|YP_001119349.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|134138771|gb|ABO54514.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
          Length = 345

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 97/311 (31%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +V  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 46  VLLVLCIGFGFLTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAS 104

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A + ++  +  G   WL +P++  +  A G I G      R     +    M+       
Sbjct: 105 AVAALLASTIPGW-GWLGVPIALAVGLAFGAINGGLISFLRLPPFIVTLGAMT------A 157

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++      G        +L               F        + + ++++  C + A  
Sbjct: 158 VRGVARLIGNDTTIFNPQLP--------------FAFIGNGTVLGVPWLVVIACAVIALS 203

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   +L  +A S    G+     AA     +
Sbjct: 204 WFILRRTVLGMRIYSVGGNPEAARLSGINVRAIQLFVYAASGLLAGLGAVMSAARLYAAN 263

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 264 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLTNGLVLLGVSDIWQYII 323

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 324 KGLVIIGAVAL 334


>gi|295703376|ref|YP_003596451.1| ribose ABC transporter permease RbsC [Bacillus megaterium DSM 319]
 gi|294801035|gb|ADF38101.1| ribose ABC transporter, permease protein RbsC [Bacillus megaterium
           DSM 319]
          Length = 344

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/314 (11%), Positives = 89/314 (28%), Gaps = 13/314 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L+  V  ++  +      + + I  +   I I  + A G++I +   G L L+      
Sbjct: 29  VLMIFVIMIIFSIATPNFLTGENISDILRSISIVTLIALGVTISLTVNG-LDLSVGSTAG 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +   +   I + I V  + S   G++     +K +   +             
Sbjct: 88  LATILSASMLVLHRQEIAVAIIVPIIASLLIGLVNAFLVVKVKIPDILAT-------LSM 140

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + I    +     G  +   +          I    F +    + + +   ++ M     
Sbjct: 141 MFIVQGILLTYTKGSAIYTNMPLPSGDRAPGIFIPSFLALGQGHLLGIPVPVIIMLLTVL 200

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + +    T     +     N +A       +   ++ A+  S    G+ G   AA    
Sbjct: 201 LVHIVFSYTKFGRFFYVTGGNIEAARLSGVPVNRYRMYAYMFSGLLAGIGGVVLAARIGV 260

Query: 256 ISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
              +         V +      V   G  ++      + ++  ++     +N  Y+   +
Sbjct: 261 GEVNAGSPFLMDAVAATYIGFSVFGAGKPNVFGTLIGSILIGVLLNGLTMLNVPYYMQDI 320

Query: 311 KFDCSFNMRHTTLM 324
                         
Sbjct: 321 IKGAVLAGALALTY 334


>gi|269964420|ref|ZP_06178662.1| putative ABC transporter, membrane spanning protein [Vibrio
           alginolyticus 40B]
 gi|269830917|gb|EEZ85134.1| putative ABC transporter, membrane spanning protein [Vibrio
           alginolyticus 40B]
          Length = 297

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 88/306 (28%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I  ++Y + A    ++  S  +++        IGA+          L  ++   +
Sbjct: 10  VINGVIVGMLYGVVAMCFVLIYKSTQVVNFAQGEFLLIGAWVCWAALVHLKLPFFIGFLL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G+ +    L+       I+ ++++               G + +        
Sbjct: 70  TLAFMMIFGIAVQTIVLRPLIGEPIISVIMVTIGLSMFFQALMKWIFGVSAVSYPQVFET 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +  E      L+    +  +   + + + +  A R    NQ+
Sbjct: 130 -----------NVVNIGGLNVEFAYILSLIFSMLIMGAFYWFFKFSKMGLAMRATAFNQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  +I      ++A+S+     AG                    I V   VILGG+
Sbjct: 179 VAQSLGISIKKVFAISWAISAMVSATAGIVIGIVNGVSDALS---IIGIKVFPAVILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         +  +  L    +  Y              +       L +++  + + 
Sbjct: 236 DSVVGAIVGGITIGVLENLAEFFDSQYL--------QVGNLYNIAPFYVLLIILAFKPYG 287

Query: 339 LLRLRT 344
           L   + 
Sbjct: 288 LFGTKD 293


>gi|157694242|ref|YP_001488704.1| sugar ABC transporter ATP-binding/membrane protein [Bacillus
           pumilus SAFR-032]
 gi|157683000|gb|ABV64144.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Bacillus pumilus SAFR-032]
          Length = 337

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/320 (12%), Positives = 94/320 (29%), Gaps = 18/320 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y     L  VV  ++      A      I ++   I I  + A GL+I +   G   L+ 
Sbjct: 27  YRYGTILTIVVLIVVFAAANPAFLQTGNIINILRSISIVTIIAVGLTISLAVNG-FDLSV 85

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +     + +   +  +  + I  +   +   G++  L  +K +   + +      
Sbjct: 86  GSVATLSNAIVISMFVWFSQNPLIAILSALAAALIVGLLNALMIVKMKIPDMLMT----- 140

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                  +    I  G A  Y           +           +F      + Y++L M
Sbjct: 141 -------LAMMFIIQGLAQTYTKGATISENMVLPDGTFSTGTIPAFFSKIGQVPYIILLM 193

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +     +++  T        I  N++A       +   K++A+ +S+ F  + G   A
Sbjct: 194 AVIVLFAHIFMTYTKHGRFMYIIGGNKEAARLSGIHVNKYKIAAYLLSALFAAIGGIVLA 253

Query: 251 ASRDRISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           +       +         V +      V+  G  +         ++  +      M+  Y
Sbjct: 254 SRVMTAEINAGTPYLMDGVAAAFIGFSVMGAGKPNAFGTFIGAVLIGILQNGLVMMSVPY 313

Query: 306 FNSLLKFDCSFNMRHTTLMV 325
           +   +       +       
Sbjct: 314 YAMDIVKGSVLALALALTYY 333


>gi|27376168|ref|NP_767697.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27349307|dbj|BAC46322.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 291

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 85/307 (27%), Gaps = 26/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G +++  +   ++        + A+   +     G   WL I +
Sbjct: 8   LVAGLATGAIYALVAVGFTLLWQTSQTINFAQGEFVMLPAFLM-LATMHVGAPFWLAIIL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++S     +     L        +  L ++ +   I IK            V      
Sbjct: 67  GILLSMILLGLAFKMLLVDPMMRHGVLPLAIATMALAIGIK----------ESVKQFFSA 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +   S++             +    VL+        +   L RT++ +  +    N  
Sbjct: 117 EASPFPSIVPTGDISILGHAVSLQSIGVLVVAILAVFGLTSLLNRTSLGHQMQAAAQNPT 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L  F +++  + +A          ++                I+GG 
Sbjct: 177 VARIIGVPVERMILLTFLINAFLVALASLLITP--IYLAKFSSGEVLGQAAFIAAIVGGF 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        ++  +  L                         + +I L +VIL R   
Sbjct: 235 NQVRGAIAGGLLIGVLDNLAASYVS-------------TQYRAAVPLIFLIVVILFRPQG 281

Query: 339 LLRLRTP 345
           LL     
Sbjct: 282 LLGRAEE 288


>gi|11497840|ref|NP_069062.1| branched-chain amino acid ABC transporter, permease protein
           (braD-1) [Archaeoglobus fulgidus DSM 4304]
 gi|2650417|gb|AAB91008.1| branched-chain amino acid ABC transporter, permease protein
           (braD-1) [Archaeoglobus fulgidus DSM 4304]
          Length = 284

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 101/302 (33%), Gaps = 30/302 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   I+ + A G S++ G   +L+     A+   A+         G +++L I    ++
Sbjct: 13  AVVGGIWGLVASGFSLIFGVSRILNFAHGAAFVSSAFL-AYALISEGYNLYLAILAGLLL 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           S   G+ +   +   R   + +  L +   F  ++ +   +  G  G+ +   +      
Sbjct: 72  SALIGLAVYALTKPVRDREVMVIILTL--AFALLVQQVLLVLYGDRGVSIEPFVSGFA-- 127

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                         V          +       ++ +++ RT +         + +A   
Sbjct: 128 ----------EIGGVKVTYMRILSFVLAVLCLTALEVFVTRTKLGKKVIATAQDSRAAMM 177

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   I    L    +SS   G AG  +A  +             I   +IVILGG+ SL 
Sbjct: 178 VGIDIEKIFLLVMVLSSVLAGFAGILYA--QIFAVSPEVSLRALIYAFAIVILGGLGSLR 235

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A+ I+  ++          ++               +M++ +  +++++   L  +
Sbjct: 236 GSVVASFIVGYILVTTITFLGARWSE-------------FVMLLTIVAILIVKPTGLFGV 282

Query: 343 RT 344
             
Sbjct: 283 EE 284


>gi|84501968|ref|ZP_01000126.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Oceanicola batsensis HTCC2597]
 gi|84389963|gb|EAQ02597.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Oceanicola batsensis HTCC2597]
          Length = 295

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 50/311 (16%), Positives = 104/311 (33%), Gaps = 24/311 (7%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                +   +  +  L+Y +FA GL ++  +  + +L       +GAY  + L    GL 
Sbjct: 3   WIFLAELAINGALTGLLYSLFAIGLVLIYKASSVPNLAQGGLTMVGAYVVLALSYDAGLP 62

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           +WL IP++A+I    G  +   +L+       +  L+++      L        G     
Sbjct: 63  LWLAIPLAAVIMFGLGFGIERVALRRLAGRPVVMILMLTLGLDIFLRGTTLAIWGGTSRS 122

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           +   + +    +  +           +        +L              RT      R
Sbjct: 123 MELGVSYEPLFLGDIFVSRIHLVGAGVALALFVAFMLFF------------RTRTGIKLR 170

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            I D+  A +S+  ++      ++A++S     AG  +   +     D       +  ++
Sbjct: 171 AIADDYMASWSVGVSVERGVGLSWALASVVAVAAGVIWGEIQ---GVDQALSLLLLKGLT 227

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           + +LGG+ S+     A  IL  V  +                         ++   L L 
Sbjct: 228 VAVLGGLDSILGAVVAGIILGVVENVGADFLDPLVGGG---------SRELIVAAVLILT 278

Query: 332 ILMRSHSLLRL 342
           +++R H L   
Sbjct: 279 VMIRPHGLFGR 289


>gi|238784344|ref|ZP_04628355.1| Monosaccharide-transporting ATPase [Yersinia bercovieri ATCC 43970]
 gi|238714772|gb|EEQ06773.1| Monosaccharide-transporting ATPase [Yersinia bercovieri ATCC 43970]
          Length = 335

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 107/317 (33%), Gaps = 18/317 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L +++ +L    ++    L        +   I  +     +  + A GL IV+   G + 
Sbjct: 18  LKRHEVMLAFTILIISTYLAFTSPDFLTLANIYDLINNYAMLTILACGLFIVL-ISGGID 76

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++      I  Y  V L  ++G +  +   ++  I    G+I  L   + R   + I   
Sbjct: 77  ISFPAMTIISQYVMVTLIVKFGGNFPVAFALAGGIGLLLGLINALLVNRLRVPSIIITIS 136

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++  +  +L   + +       +          T                Y+  +   +
Sbjct: 137 TLNIFYGLLLYLSRGVWLYTYPEWFEHGPMLFSFTAAD------------GYDYGLSLPI 184

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +        L + RT+I      +  NQ+A   +  +I+  +L  +       G+AG 
Sbjct: 185 LTLLITIIVTALLMTRTSIGRQIYALGGNQEAASRMGFSILKLQLFVYGYMGFLSGIAGV 244

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
             + +   ++PD     E  ++ ++V     I+GG  +L+       +L  +      + 
Sbjct: 245 VQSYTVLTVAPDSLLGYELTVLAAVVLGGTSIVGGRGTLTGTLLGVILLAILQNGLNLLG 304

Query: 303 FYYFNSLLKFDCSFNMR 319
              +   +       + 
Sbjct: 305 ISSYWHTVVIGLVIVIS 321


>gi|228957086|ref|ZP_04118857.1| Ribose ABC transporter [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229108275|ref|ZP_04237896.1| Ribose ABC transporter [Bacillus cereus Rock1-15]
 gi|228675188|gb|EEL30411.1| Ribose ABC transporter [Bacillus cereus Rock1-15]
 gi|228802594|gb|EEM49440.1| Ribose ABC transporter [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 311

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 98/312 (31%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLVLIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        ++    +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMVV--GLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|123444288|ref|YP_001008391.1| sugar transport system permease protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122091249|emb|CAL14135.1| sugar transport system permease protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 394

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 50/355 (14%), Positives = 100/355 (28%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  +AV+     F   GA  S + I ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 33  MLAAIAVIMLFFTFTTEGAYLSARNISNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 91

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA-------- 125
             +   +  I     G  + L I V+  +    G   G      +     +         
Sbjct: 92  MGLLGGAAAIFDVWLGWPLPLTIVVTLGLGLVLGAWNGWWVAYRKVPSFIVTLAGMLAFR 151

Query: 126 ---------------------------------TLIMSEIFQNILIKWKPITNGKAGIYV 152
                                             +    +   ++ +W+  ++       
Sbjct: 152 GILIGITNGTTVSPTSNAMSQIGQSYLPNGLGFGIGAIGLMLFVVWQWRRRSHRIRLGLP 211

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                   T               +     +   +L +  L  + I    RTA       
Sbjct: 212 VAAPQGDVTRQTITAVIVLGAIYLLNDYRGVPTPVLILTALMLAGIFMATRTAFGRRIYA 271

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N  A       +   KL+ FA++   + MAG   ++     SP     +E   + + 
Sbjct: 272 IGGNIDAARLSGVNVERTKLAVFAINGLMVAMAGLILSSRLGAGSPSAGNIAELDAIAAC 331

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 332 VIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGAILLLAVWM 386


>gi|319793847|ref|YP_004155487.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315596310|gb|ADU37376.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 317

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 110/320 (34%), Gaps = 27/320 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M + GL+++   +G+L+      Y +GAY          +  W  + +
Sbjct: 10  LLNGVSYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYIAY--TLSNIIGFWPALFI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  G      SL+    +  +  L+++     ++++   +  G            
Sbjct: 68  APLLVGMLGAAFERYSLRRVHKFGHVPELLVTFGLSYLILELVQLAWG---------RST 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + + ++   F      +     +++L    +  S+ L L RT I    +    +  
Sbjct: 119 VPYGLPTQLQGPLFSLYGTQFPKSRSFIMLVAVLMLISVWLLLTRTRIGLVIQAALKHPD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    +  F   +A      A        ++      S   I+  +V++GGM
Sbjct: 179 MVEALGHNVPRVFMLVFGGGAAL--AGLAGVVGGNTYVTEPAMAASVGSIIFVVVVVGGM 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT--------------TLM 324
            SL+    A+ ++  +      M+      L     +   +                 L 
Sbjct: 237 GSLAGAFLASLLIGIIQTFAVAMDQSLATGLRAIGVAVTDQTFGYELLKLTISQVAPILP 296

Query: 325 VIALFLVILMRSHSLLRLRT 344
            + L L+++ R   LL  R 
Sbjct: 297 YLFLVLILIFRPKGLLGKRE 316


>gi|237815012|ref|ZP_04594010.1| ribose ABC transporter permease [Brucella abortus str. 2308 A]
 gi|237789849|gb|EEP64059.1| ribose ABC transporter permease [Brucella abortus str. 2308 A]
          Length = 341

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 87/301 (28%), Gaps = 17/301 (5%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      S   + ++  +     + A G + V+ S G L L+     A  A   ++  + 
Sbjct: 46  IANPNFISIDNLLNVATRSAFIAIIALGATYVI-SSGGLDLSVGAMVAFVASIMILFMNS 104

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             ++  +L+ ++A++                     I   I +     I           
Sbjct: 105 GMIADPVLMLIAAVMLALVVGAACGILNGIITTVGGIEPFIATLGTMGIYRGLTTW---- 160

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                         T+R+      +  ++    + +   ++ +   +A     L RT   
Sbjct: 161 -------LSQGGAITLRNPEIQSLYRPAYFGSVLGVPVPVIVIFVTAALAAFVLYRTRYG 213

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N+        ++   +  AF +    + +A   +       S       E  
Sbjct: 214 RHIIAVGSNEDVARYSGISVKKVRTIAFVIQGLCVAVAVLLYVPRLGSTSATTGLMWELQ 273

Query: 268 IVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V+      GG+  +        IL  +  +    +F     L     +  +    
Sbjct: 274 AITAVVVGGTALRGGVGRIWGTICGAFILEIIGNIMLLSSFVSEYLLGAIQGAIIIIAML 333

Query: 323 L 323
           +
Sbjct: 334 V 334


>gi|221214963|ref|ZP_03587931.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia multivorans CGD1]
 gi|221165190|gb|EED97668.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia multivorans CGD1]
          Length = 311

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 99/312 (31%), Gaps = 22/312 (7%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +     L+  M + GL+++    G+L+      Y +GAY             W  + ++ 
Sbjct: 10  NGLSYGLLLFMLSAGLTLIFSVQGVLNFAHASFYMLGAYVGY--SIALRAGFWPALVLAP 67

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +  GA G       L+        + L+++     ++ +   +  G A +       F G
Sbjct: 68  LAVGALGAACERTLLRRVQARGHTSELLLTFGLAYLIGEGAKLAWGLAPLPAPVPASFEG 127

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             V             +    +  +++     +  ++   LR + +    R    ++ A 
Sbjct: 128 APVT---------VFGLALPRYRLFMMTMSAAMLIALGALLRTSRLGLVVRAALTHRAAV 178

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +L   +       F   +A   +AG   A     +       +   +V ++V++GG+ S
Sbjct: 179 EALGYDVPRLMTLLFGAGTALAALAGVIGAPLA--VIEPALAETVGSVVFAVVVIGGLGS 236

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN---------MRHTTLMVIALFLV 331
           L     A+  +     L    +            +                +  + L  V
Sbjct: 237 LGGAFVASLAVGFAQTLAASSDVTLRTLAQAAGLALPDGVAAVSIAQLAPLVPYLLLVAV 296

Query: 332 ILMRSHSLLRLR 343
           ++ R   L   R
Sbjct: 297 LVARPRGLFGER 308


>gi|221633384|ref|YP_002522609.1| ABC transporter permease [Thermomicrobium roseum DSM 5159]
 gi|221155988|gb|ACM05115.1| ABC transporter, permease protein [Thermomicrobium roseum DSM 5159]
          Length = 292

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 71/289 (24%), Gaps = 9/289 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A GL++  G   +L+L         A    +L  RY LS  + + +
Sbjct: 8   LVTGLVYGGVYALLALGLTLQYGVARILNLAYGDFLIAAALLTTLLFQRYQLSPLVALLL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A +S    +++                                       +       F
Sbjct: 68  LAPLSFLIHLLVYHLV-------FVPLERRSGSWRAMEASSILLAFGLSFVVSGTMLAIF 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                 +         +      A   L L RT I  A R I  +  
Sbjct: 121 GGKLFSYSYLLVPVKLLGSVVPANRLLAFVLALAFGALAYLLLVRTRIGTAIRAIAVDPD 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   +       FA        +G   +  +          +  +  + +VILGG+
Sbjct: 181 GAPLAGIDVRRWAGLTFAFGGIICAASGVLISMFQTF--NVPMGITFTLKALVVVILGGV 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            +      A  IL                    +        T    I 
Sbjct: 239 GNALGALVAGLILGVTESFVARFVSPGLTLAAVYALFILAVLTLRTGIL 287


>gi|158424495|ref|YP_001525787.1| ABC-type branched-chain amino acid transport permease component
           [Azorhizobium caulinodans ORS 571]
 gi|158331384|dbj|BAF88869.1| ABC-type branched-chain amino acid transport permease component
           [Azorhizobium caulinodans ORS 571]
          Length = 290

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 93/280 (33%), Gaps = 14/280 (5%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            +Y + A GL++  G++ +++L       + AY   ++  R GL  ++ IP++ ++  A 
Sbjct: 17  SVYALVALGLALAFGAMRIINLAHGELVLLAAYMAYVVEQRLGLEPYMAIPLALVVVSAV 76

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
            +++ +     + D+  + +LI++     IL     +                  +   +
Sbjct: 77  SIVLFMLVNMIK-DHRELNSLILTFAVGIILTNAILLVFASDMRTTTSVFLQDAISFGDV 135

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                   +F +  +               +  WL+ +    A R +  N+ A   +   
Sbjct: 136 FAMKGELVAFGLSIVL-----------MGFLWWWLKASWYGRAVRAVSSNRGAAKLMGIN 184

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
               +  AF V+ A   +AG   A     +       +  +    I +L G+ S+  +  
Sbjct: 185 PTRIETVAFLVAGALASVAGV--ALYTMSVVQPAVGHALTVKAFIITVLAGVGSIPGVLL 242

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
              +L     L           L        +       +
Sbjct: 243 GAVLLGVTEALTVTFASSALQELAGMVLFLLVLFLMPNGL 282


>gi|10954917|ref|NP_053337.1| hypothetical protein pTi-SAKURA_p099 [Agrobacterium tumefaciens]
 gi|6498270|dbj|BAA87722.1| tiorf97 [Agrobacterium tumefaciens]
          Length = 360

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/318 (14%), Positives = 89/318 (27%), Gaps = 23/318 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           + +      A+V   +  +      +   + S+        + + G++I++   G   L+
Sbjct: 7   RPEFTAVGAAIVVITVFSIMSPLFLTIPTLASVSSVAAELGIVSIGMTILL-IAGHFDLS 65

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 + ++  V L + +GLS    I  +   + A G++ GL   K       I     
Sbjct: 66  VGAILGLTSFFVVTLMNNFGLSPVFAIFFAIAGACALGLVNGLLQTKTGIHSFIITLGTS 125

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 +L                  +         +                    L+ 
Sbjct: 126 LVYRGMLLAFTGGFPKSVDMPREVSNVIAGPILFGGMRMS-----------------LVW 168

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              ++    + L RT + N  + +  N KA  +L   +    + AF +S    G+ G   
Sbjct: 169 FILITVLATILLLRTRLGNWIQAVGQNAKAAHNLGVNVNRTTILAFTLSGGLAGIVGVMQ 228

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AA    +        E   V   VI      GG  S         +L  +      ++  
Sbjct: 229 AARFASVDAMRGTGIELQAVAVSVIGGTLLSGGYGSAIGAMMGAIVLASIQTGLVLVSAP 288

Query: 305 YFNSLLKFDCSFNMRHTT 322
            F                
Sbjct: 289 GFLYTTIMGVIVVGAVLV 306


>gi|71733715|ref|YP_275345.1| sugar ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71554268|gb|AAZ33479.1| sugar ABC transporter, permease protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 341

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 47/319 (14%), Positives = 96/319 (30%), Gaps = 26/319 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + L+ +   L+  LF    + Q ++ +      M +Q+ I  + A G++ V+ + G + L
Sbjct: 27  IFLVLIGIGLIFELFGWIVRDQSFLLNSQRLVLMILQVSIIGLLAIGVTQVIITTG-IDL 85

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+ A     L              S         +  LP        L +  L 
Sbjct: 86  SSGSVLALSAMIAASLAQ-----------TSDFSRAVFPSLTDLPVWIPIVVGLGVGLLA 134

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
            +     I I   P      G+ V+ R      T    +       + +        + L
Sbjct: 135 GAINGSIIAITGIPPFIATLGMMVSARGLARFYTEGQPVSMLSDSYTAIGQGAMPVIIFL 194

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +        + LR T        I  N +A  +    +    +  ++++    G+AG  
Sbjct: 195 VVA---VIFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLVIVYSIAGLLAGLAGVV 251

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            +A        M    E   + + VI      GG+  ++       IL  +      +  
Sbjct: 252 ASARAATGQARMGMSYELDAIAAAVIGGTSLSGGVGRITGTVIGALILGVMASGFTFVGV 311

Query: 304 YYFNSLLKFDCSFNMRHTT 322
             +   +       +    
Sbjct: 312 DAYVQDIIKGLIIVVAVVI 330


>gi|325519806|gb|EGC99100.1| branched-chain amino acid ABC-type transport system permease
           component [Burkholderia sp. TJI49]
          Length = 222

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 55/253 (21%), Positives = 97/253 (38%), Gaps = 33/253 (13%)

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
            S  + IP +  I+   G ++  P+ + RG Y++IATL + E+   +++ W  +T G  G
Sbjct: 2   WSPAVTIPCAGAITAVLGTLLVYPAFRLRGHYVSIATLGIGEVVSLVILNWDGLTRGPLG 61

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           I     L +                         Y+  L +    A + + L R+ +   
Sbjct: 62  ITGIAPLPW------------------ASTAQAAYWFTLAVLVAFALVQVRLLRSHLGRT 103

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R +R++  A  +        K  AFAV     G++G   A     I+   F    +I+ 
Sbjct: 104 LRAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINHQTFDSQVSILA 163

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           +++VILGG+ ++         LIG+ EL      Y                  +  + L 
Sbjct: 164 LTMVILGGLGNVLGGIVGALALIGLPELFRWAADY---------------RMLIYGLVLL 208

Query: 330 LVILMRSHSLLRL 342
           L++  R   LL  
Sbjct: 209 LLVRFRPQGLLGT 221


>gi|225573816|ref|ZP_03782571.1| hypothetical protein RUMHYD_02018 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038844|gb|EEG49090.1| hypothetical protein RUMHYD_02018 [Blautia hydrogenotrophica DSM
           10507]
          Length = 144

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/129 (34%), Positives = 69/129 (53%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           ++ L   L       Q YI  + +   IY   A  ++I++G  GL SL     + IGAY+
Sbjct: 16  IFLLAFALIGPLVIHQNYIIHLMVMCAIYAGLACSMNIILGYTGLFSLAHAAFWGIGAYT 75

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             IL  + G  IW+ + +S +++   GMI+ +PSL  RGDYLAI TL   +I + I +  
Sbjct: 76  SGILVGKLGFPIWVGVLLSGVVACIFGMIIAIPSLNLRGDYLAIVTLGFGQIVRLIELNE 135

Query: 141 KPITNGKAG 149
           + +TNG  G
Sbjct: 136 QWLTNGAMG 144


>gi|218678485|ref|ZP_03526382.1| urea ABC transporter, permease protein UrtC [Rhizobium etli CIAT
           894]
          Length = 213

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 54/180 (30%), Gaps = 14/180 (7%)

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +        F          ++        LS  +   + R+        +RD +     
Sbjct: 28  LTDFKDILGFNVQADGTRAALFAATAIFLALSLLLASAIVRSKFGKVLVGVRDAESRTRF 87

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   +   KL  F VS+   G+AGA +      I+P  F  + +I V+    +GG  +L 
Sbjct: 88  LGYRVEHFKLFTFVVSAMMAGIAGALYVPQVGIINPGEFAPANSIEVVIWTAVGGRATLI 147

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  ++ G   +  G+              F       +      V L     ++  
Sbjct: 148 GPIIGAILVNGGKTIFTGL--------------FPEFWLFALGGLFVAVTLFLPKGVVGT 193


>gi|171322251|ref|ZP_02911092.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MEX-5]
 gi|171092424|gb|EDT37775.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MEX-5]
          Length = 345

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 97/311 (31%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +V  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 46  VLLVLCIGFGFLTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSILAAS 104

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A + ++  +  G   WL +P++  +    G+I G      R     +    M+       
Sbjct: 105 AVAALLASTIPGW-GWLGVPIALAVGLGFGVINGGLISFLRLPPFIVTLGAMT------A 157

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++      G        +L               F        + + ++++  C + A  
Sbjct: 158 VRGVARLIGNDTTIFNPQLP--------------FAFIGNGTILGVPWLVVIACSVIALS 203

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   +L  +A S    G+     AA     +
Sbjct: 204 WFILRRTVLGMRIYSVGGNPEAARLSGINVRAIQLFVYAASGLLAGLGAVMSAARLYAAN 263

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 264 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLTNGLVLLGVSDIWQYII 323

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 324 KGLVIIGAVAL 334


>gi|160901981|ref|YP_001567562.1| inner-membrane translocator [Petrotoga mobilis SJ95]
 gi|160359625|gb|ABX31239.1| inner-membrane translocator [Petrotoga mobilis SJ95]
          Length = 293

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/282 (10%), Positives = 89/282 (31%), Gaps = 10/282 (3%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
           Q  +Y + A+G++++  + G+L+     +  +G+Y   +       +I L +  +     
Sbjct: 13  QGALYGLTAFGIALIFRTTGVLNFAHGNSGMLGSYI-GLTVYLVSGNIILSLISAVFSGF 71

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
             GM++    ++        A L+++     ++     +  G       +          
Sbjct: 72  LIGMVVERFLMRPLKHLSHGAMLMVTLGLLMVIEGLVVLVWGTDYFSYPEL-------FS 124

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
                    +  ++       + +    +   + ++L+ T +  A R     +       
Sbjct: 125 GKPFILFLENGVLVMPSNDVVITIISIAVMLLLAMFLKYTKLGIAIRARSQEEIGSLVCG 184

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
             I       +++  A + + G   A             +  +  I+  +LGG ++L  +
Sbjct: 185 IDINRVDAIVWSIGIATVSLVGIIAAPKTYI--HPSMLINMQLYGITAGVLGGFSNLFGV 242

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
                IL  + +L        +   +       +       +
Sbjct: 243 IIGGLILGVLEKLVGVYISPDYQLSIILVLIILVLLFKPSGL 284


>gi|116253910|ref|YP_769748.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115258558|emb|CAK09662.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 334

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 87/313 (27%), Gaps = 17/313 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  ++  L          + ++  +     + A G + V+ S G L L+     A
Sbjct: 26  FVALALLLIVGALVNPNFIGITNLANVATRSAFIAIIAVGATFVI-SAGDLDLSVGSMVA 84

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             A   ++L +   +    L+ + A++       +   +         I   I +     
Sbjct: 85  FVASLMILLMNSGAIENPALMLLVAVVFTMVAGALCGLANGLITTVGRIEPFIATLGTMG 144

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I                         T+RS      +  ++      +   ++ +  ++A
Sbjct: 145 IYRGLTTW-----------LSQGGAITLRSADIQTLYRPAYFGNIAGVPVPIVVILAVTA 193

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L RT        +  N          +   +  AF +    + +A   +      
Sbjct: 194 VAAFILYRTRYGRHVVAVGSNSDVARYSGIAVNRVRTIAFVIQGLCVAIAVLLYVPRLGS 253

Query: 256 ISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            S       E   + ++V+      GG   +        IL  V  +    NF     + 
Sbjct: 254 TSATTGILWELQAITAVVVGGTALKGGAGRVWGTICGAFILELVGNIMLLSNFISEYLIG 313

Query: 311 KFDCSFNMRHTTL 323
               +  +    +
Sbjct: 314 AIQGAIIIIAMFV 326


>gi|150395570|ref|YP_001326037.1| monosaccharide-transporting ATPase [Sinorhizobium medicae WSM419]
 gi|150027085|gb|ABR59202.1| Monosaccharide-transporting ATPase [Sinorhizobium medicae WSM419]
          Length = 347

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/314 (12%), Positives = 93/314 (29%), Gaps = 21/314 (6%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   L ++  +   +   A  S   + +M I+  + ++ A G++ V+ + G + L+    
Sbjct: 40  IFGSLIIIIAIFTVMAPTAFLSGINLRNMAIEASMMMILAVGMTYVIITSG-IDLSVGAV 98

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
               + + +I     G     +  +   ++ A G   GL +            ++     
Sbjct: 99  LVFSSVASLIAMRATGSDAPWVPVLGLAVALASGAFWGLVNGLLIARARLTPLIVTLASM 158

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
              L   + +T G                  + +      S  +     +  ++L  C  
Sbjct: 159 GIALGLARLMTGGVD---------------LTGVPRSIVTSIGIGRIGGIPVIVLIACVF 203

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           ++   + L  T        +  N++        +    +S +  S    G+AG       
Sbjct: 204 ASVAGIALHMTRFGLYTYAVGSNEQGARRAGIKVDRHLISIYVFSGVCAGLAGYLTLTRF 263

Query: 254 DRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              +           + ++V     + GG+ S+   A    I + +      +    F  
Sbjct: 264 SSTTISGHAMDNLKAITAVVLGGASLFGGIGSMYGTAAGVFIPVVLASGLIIVGLPSFWQ 323

Query: 309 LLKFDCSFNMRHTT 322
            +            
Sbjct: 324 EVAVGIVLLAAVLL 337


>gi|23500587|ref|NP_700027.1| ribose ABC transporter permease [Brucella suis 1330]
 gi|161620913|ref|YP_001594799.1| hypothetical protein BCAN_B0876 [Brucella canis ATCC 23365]
 gi|254703185|ref|ZP_05165013.1| hypothetical protein Bsuib36_04489 [Brucella suis bv. 3 str. 686]
 gi|260567884|ref|ZP_05838353.1| monosaccharide-transporting ATPase [Brucella suis bv. 4 str. 40]
 gi|261753808|ref|ZP_05997517.1| monosaccharide-transporting ATPase [Brucella suis bv. 3 str. 686]
 gi|23464226|gb|AAN34032.1| ribose ABC transporter, permease protein [Brucella suis 1330]
 gi|161337724|gb|ABX64028.1| Hypothetical protein BCAN_B0876 [Brucella canis ATCC 23365]
 gi|260154549|gb|EEW89630.1| monosaccharide-transporting ATPase [Brucella suis bv. 4 str. 40]
 gi|261743561|gb|EEY31487.1| monosaccharide-transporting ATPase [Brucella suis bv. 3 str. 686]
          Length = 346

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/313 (10%), Positives = 84/313 (26%), Gaps = 10/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                +    +         +      M   + I+ + A G+ ++V   G + L+     
Sbjct: 31  AFFALIAIIAVFSFLSPYYFTVDNFLIMSSHVAIFGLLAIGM-LLVILNGGIDLSVGSTL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       L     L  + +I    + +           +      +    +    +  
Sbjct: 90  GLAGVVAGFLMQGVTLQEFGIILYFPVWAVVLITCALGAFVG----AVNGVLIAYLRVPA 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +             + + + L +     R  +    F          +   +L +  L+
Sbjct: 146 FVATLGVLYCARGVALLMTNGLTYNNLGGRPELGNTGFDWLGFNKLFGVPIGVLVLAILA 205

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L RTA          N++A       +   K+S + +S     +AG    +   
Sbjct: 206 IICAIVLNRTAFGRWLYASGGNERAAELSGVPVKRVKVSVYVISGICAAIAGLVLFSQLT 265

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG  ++        ++  + +    +    +   
Sbjct: 266 SAGPTAGTTYELTAIAAVVIGGAALTGGRGTIQGTLLGAFVIGFLSDGLVIIGVSSYWQT 325

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 326 VFTGAVIVLAVLL 338


>gi|299066149|emb|CBJ37332.1| putative transmembrane abc transporter protein [Ralstonia
           solanacearum CMR15]
          Length = 289

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 94/305 (30%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +  +   GLS+ +G +  ++L        G Y  V+L +R G+     +P+
Sbjct: 8   LFDGLAYGCLLFLIGIGLSVTMGLMRFINLAHGAFAMAGGYVCVVLMNRLGMPFLATLPI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + + A G ++     +       +  ++ S     + +       G +   V      
Sbjct: 68  AFLATAAAGFVLERTLYRRLYRASPLDQVLFSIALVFMAMAGATYVWGPSQQPVELP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L    R   S +    +  +++  +  L+A +   + RT      R   DNQ+
Sbjct: 125 -----DALRGQLRVFDSGLEVGRYRLFLVGVVVVLTALLAWLIERTRFGARVRASVDNQQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +       FA+ S                     F     +  + +V +GG 
Sbjct: 180 AAAGLGINVGLVFSVTFALGSGL--AGLGGGLGIDVLGLDPAFPIKYMVYFLLVVAVGGA 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  +L                               ++   + L++ +    
Sbjct: 238 GSIKGTLLAALVLGVFDVAGKYY--------------VPEVGAFVIYGLMVLLLALFPGG 283

Query: 339 LLRLR 343
           LL  R
Sbjct: 284 LLGRR 288


>gi|239624769|ref|ZP_04667800.1| ABC transporter permease protein [Clostridiales bacterium
           1_7_47_FAA]
 gi|239521155|gb|EEQ61021.1| ABC transporter permease protein [Clostridiales bacterium
           1_7_47FAA]
          Length = 292

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 86/303 (28%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V       +        +GA++         L ++  I +
Sbjct: 8   LVTGISIGSVYALLAVGYALVFSVFNFSNFGFGPVMMLGAFAAFYAIPALNLPLFPSILL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++G    IM L   +              +  +  L+      N             
Sbjct: 68  AMVVAGIVSFIMELTVYRPMRQ---------KKTLKLYLMIAGLGINTFVPNAAIQIFGG 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S           V          +    + A + ++L  T +    R    +  
Sbjct: 119 GVHAFPSDWARVTIQMGGVAVPRSDILAAVLSILMLAGLWIFLYNTRMGLGIRASSFDTN 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   + F  +  F +S A  G+AG F+              +          +GG+
Sbjct: 179 TASLMGINVNFVAMVVFLLSGAAAGLAGCFYGMKYSVFPSMG---AIANKGFVAATIGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL+    +  +L  +  +  G                +     +    L +V++   + 
Sbjct: 236 GSLTGAVISGLLLGFLETMIAGYVS-------------STYRDLIAYAMLVIVLIFMPNG 282

Query: 339 LLR 341
           +L 
Sbjct: 283 ILG 285


>gi|206900207|ref|YP_002250181.1| ribose transport system permease protein RbsC [Dictyoglomus
           thermophilum H-6-12]
 gi|206739310|gb|ACI18368.1| ribose transport system permease protein RbsC [Dictyoglomus
           thermophilum H-6-12]
          Length = 335

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 94/313 (30%), Gaps = 23/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +     ++ L++ L      S + +  + +   I  + A G  +V+   G + L+     
Sbjct: 25  IIFPLFLFGLIIALRNPYFISWENLRYIFLDASILTIVAVGEMMVI-LTGGIDLSVGSNL 83

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      +L         +L P+  ++ G     +    +        IATL    IF+
Sbjct: 84  ALTGMIVSMLYRDLPNFPVILAPLIGILIGGICGTINGLFVAKGKVIPIIATLSTMYIFR 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+                      G  V +      +     +  + +  +++    + 
Sbjct: 144 GIVYIISK-----------------GRWVNAHEMPEGYKLLTRVEILGIPILVIYAIIVF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L   AI  +   + +N ++   +    +      + +S    G+ G  + +   
Sbjct: 187 LLFYYLLNYKAIGRSIYAVGNNPQSAVYIGINRVKVLFLVYLISGILAGLGGVLYTSRFA 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                     E   + ++VI      GG   +  +     +L  +V     M    F  L
Sbjct: 247 SAESSAAMGFELSAISAVVIGGVKTTGGAGKIGGVVLGALLLTMIVNGLNVMKISPFYKL 306

Query: 310 LKFDCSFNMRHTT 322
                 F +    
Sbjct: 307 ALQGLMFLIAVIV 319


>gi|89055580|ref|YP_511031.1| inner-membrane translocator [Jannaschia sp. CCS1]
 gi|88865129|gb|ABD56006.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Jannaschia sp. CCS1]
          Length = 337

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 97/314 (30%), Gaps = 24/314 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L  V+  +   +      +   I ++  QI I ++ A G++ V+   G + L+     
Sbjct: 32  IGLALVLLIIFFSVTTEFFLTPNNITNILTQITINLILAVGMTFVILIGG-IDLSVGSVM 90

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  A     + +  G+    LI ++ +     GMI G+ +      +   + +I   +  
Sbjct: 91  AFSAVVAGKVITLPGMGPTELIILAVLAGLIAGMICGMINGAISAYWSLPSFIITLGMLN 150

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                   I+  +                              I    +  V L    L 
Sbjct: 151 IARGAGLQISGAQTIYAFPFAFEEF----------------GSILIYGVPVVFLVALALV 194

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L  T        I +N++A       + + K++AF +     G+A   + A  +
Sbjct: 195 GVAWFVLNSTVFGRLIYGIGNNEEAVRLAGHPVFWIKVAAFTICGMTAGIAAIIYMARLN 254

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            IS  +      +  I+ VI+      GG  S+        I+  +      +    F  
Sbjct: 255 -ISSPIAGIGFELNAIAAVIIGGTSLNGGRGSVIGTLLGAFIIGVLANGLILIGLSDFMR 313

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 314 QMITGVVIVVAVIL 327


>gi|302030319|gb|ADK91602.1| hypothetical protein [Streptococcus equinus]
          Length = 657

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 100/305 (32%), Gaps = 33/305 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +   Q L++ + A G+ I    L +  L+   ++ +GA S  I+     ++  L    
Sbjct: 361 ILTAISQGLLWAIMAIGVFITFRILDIADLSAEGSFPLGAASTAIMIVNG-INPLLATIG 419

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +     G + G    K +   L    ++++ ++   L+          G         
Sbjct: 420 GFVAGMLAGAVAGFLHTKMKIPALLTGIIVLTALYSVNLLVLGSANVSLVGQ-------- 471

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +      +  +     +  + +    L   +++ L  T +  A R   DN  
Sbjct: 472 ------ETLVTVMTSALSLSKLYAVILIGVIFVALVILLLVVLLNTQMGLALRATGDNLA 525

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +   K+  + VS+  I +AG+  A +      +M   +         I+ G+
Sbjct: 526 MGEANGIKVDRMKILGYMVSNGLIALAGSLLAQNNGYADMNMGTGT---------IVNGL 576

Query: 279 TSLSKIAKATAILIGVV------ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            S+     A  I+  +        +  G   Y    ++    + + +   L    L  +I
Sbjct: 577 ASI---ILAEVIVKYLPLGKRLWSIVLGSILYRLVLVIILAMNVDAQMLKLASAVLLALI 633

Query: 333 LMRSH 337
           L    
Sbjct: 634 LYVPE 638


>gi|134280713|ref|ZP_01767423.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 305]
 gi|134247735|gb|EBA47819.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 305]
          Length = 344

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 92/311 (29%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 45  VLVLLCVGFGFMTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 103

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S      WL IP +  +  A G++ G      R     +    ++ +     
Sbjct: 104 A-VASLLASNLPGWGWLGIPAALAVGLAFGVVNGGLISFLRLPPFIVTLGALTAVRGIAR 162

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    +G           F        + + ++++    + A  
Sbjct: 163 L--------------------MGNDTTIFNPQLPFAFIGNGSILGVPWLVVIALAVVAIS 202

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +      +  N +A       +   +L  +A S    G+     AA     +
Sbjct: 203 WFILRRTVLGMRIYAVGGNPEAARLSGINVRGIELFVYASSGLLAGLGALMSAARLYAAN 262

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 263 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLSNGLVLLGVSDIWQYII 322

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 323 KGLVIIGAVAL 333


>gi|123441173|ref|YP_001005160.1| putative sugar ABC transporter, permease protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122088134|emb|CAL10922.1| putative sugar ABC transporter, permease protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 372

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 92/299 (30%), Gaps = 9/299 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +      + +    +   +  M   I I    A G++ V+ + G + L+      
Sbjct: 35  FIALFLILGFFSVMVPGFLATGSLIIMVKHIAINAFLALGITFVIITAG-IDLSIGATLG 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + ++  +     I +   +     +++ + +L    +   I    ++     
Sbjct: 94  LCGMIAGWMITQGIVLPMFGIAIFPSVWVVVPVVLVIGALIGAVNGWIITRYNVAPFICT 153

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +   +       A + ++    F G      +    F        + +   +  M  L+ 
Sbjct: 154 LGTMYVVR---GAAMLISGGETFPGLQGNPQLGNTGFDLLGSGTLLGLPIAIWIMFILAL 210

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I    RR         I DN++A       +   K+  + +S     +AG   +A    
Sbjct: 211 VIAYVARRLPFGRHVYAIGDNERAAELSGVKVRQVKVWVYTISGFCAAIAGIIVSAQLVA 270

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             P      E   + ++V+      GG  ++        ++  + +    M    F  +
Sbjct: 271 SHPANGSGFEMNAIAAVVLGGTSLAGGRGTILGTLIGAFVIGILADGLVMMGVSEFWQM 329


>gi|332084644|gb|EGI89835.1| ribose transport system permease protein rbsC [Shigella boydii
           5216-82]
          Length = 319

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 90/312 (28%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A
Sbjct: 23  LIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +      ++  +    A+ +    +  G+ +                   Q 
Sbjct: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGGIVAKGR---------------VQA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +   +    V      + T        F +        +     ++G+ FL+A
Sbjct: 127 FIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   R  +      +  N+ A       +    +  +++      +AG    A    
Sbjct: 187 WYMLHHTR--LGRYIYALGGNEAATRLSGINVNK--IIVYSLCGLLASLAGIIEVARLSS 242

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        IL  +      +    +  ++
Sbjct: 243 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 302

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 303 VKAVVILLAVLV 314


>gi|238763015|ref|ZP_04623982.1| Inner-membrane translocator [Yersinia kristensenii ATCC 33638]
 gi|238698773|gb|EEP91523.1| Inner-membrane translocator [Yersinia kristensenii ATCC 33638]
          Length = 348

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 95/326 (29%), Gaps = 25/326 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLG-----ATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           +L K   I  ++  +  +   L           +   +  + +Q+ I  + A G++ V+ 
Sbjct: 29  KLPKDTGIFIVMVGIALIFELLGWFIRDQSFLLNPNRLLLIILQVAIIGIIAVGVTQVII 88

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           + G + L+     A+ A     L                 IS     ++ LP+       
Sbjct: 89  TTG-IDLSSGSLIALTAVVAASLAQTSDS-----------ISPMYPHLLDLPAAIPITAG 136

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           + +  +        I     P      G+ V+ R      T  + + F     + +    
Sbjct: 137 IGVGIICGFINGFLITRTGIPPFIATLGMMVSARGLAQYYTKGNPVSFLSDDFTAIGQGA 196

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
               + L +        + L+ T        I  N  +       +    +  + ++   
Sbjct: 197 MPVIIFLVIA---VIFHIALKHTRYGKYVYAIGGNMISAKVSGINVNKYLVLVYTIAGGL 253

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+AG   AA        M +  E   + + VI     +GG+  ++       IL  +  
Sbjct: 254 AGLAGVVLAARVSSGQSSMGQSYELDAIAAAVIGGSSLMGGVGRITGTVIGAVILGLIKS 313

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               +    +   +            
Sbjct: 314 GFTFIGVDSYIQDIIKGIIIVSAVAI 339


>gi|254362822|ref|ZP_04978900.1| possible sugar ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica PHL213]
 gi|153094453|gb|EDN75296.1| possible sugar ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica PHL213]
          Length = 342

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 99/309 (32%), Gaps = 27/309 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
           GA  SQ+ I ++  ++ I+ + A G++ V+ + G + L+     A+ A     +      
Sbjct: 45  GAFLSQRNIYNVLTEVSIFGIMAVGMTFVILTAG-IDLSVGSILAVTAMFAAYIIKGDNT 103

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
               +   +    G   +I     L        +  L ++++     I          G+
Sbjct: 104 ----VTLEAGAWGGMSWLIGLSICLGLGTFIGWLHGLGVTKLKLPPFIITLGGMTIWRGL 159

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +               R++       +    + + ++ +    A       +T      
Sbjct: 160 TLVLNNGSPIAGFDEGYRWWGRGDILGVPVPVVIFAVVAIIGYFAL-----HKTRWGRYV 214

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
            ++  N +A       I    +S + V  A  G+AG   +A             E  ++ 
Sbjct: 215 YSVGGNPEAARLAGVNINRTLVSVYVVIGALAGLAGFILSARLGSAESVAGVSFELRVIA 274

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           S+VI     +GG   ++     + I+  ++     M+   +                +M 
Sbjct: 275 SVVIGGTSLMGGYGRVTGTIIGSIIMGVLINGLVLMDVSAY------------YQQIIMG 322

Query: 326 IALFLVILM 334
           + + L +  
Sbjct: 323 LIIILAVAF 331


>gi|114563007|ref|YP_750520.1| inner-membrane translocator [Shewanella frigidimarina NCIMB 400]
 gi|114334300|gb|ABI71682.1| inner-membrane translocator [Shewanella frigidimarina NCIMB 400]
          Length = 297

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/306 (10%), Positives = 90/306 (29%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I  L+Y +      +V  S  +++        +GA+    +     L   +    
Sbjct: 10  VINGLIVGLLYGVVGMCFVLVYKSTQVVNFAQGEFLLVGAWVCWAMLIYLELPFIVGFLA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+++ +  L+       I+ ++++               G +          
Sbjct: 70  TMVFMAIFGILIQMIVLRPMIGEPIISVIMVTIGLSIFFQALMKWIFGVSAQS------- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +          +  E       +    +  +  L+ + +    A R    +Q+
Sbjct: 123 ----FPKVFETENIQIFGLNIESAYLMSTVIALIIMVAFFLFFKYSKYGLAMRATAFDQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  ++      ++ +++     AG          +         + V   VILGG+
Sbjct: 179 IAQSLGISVKQVFAMSWGIAATVSATAGIVIGMVNGVSNSLA---VMGVKVFPAVILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +  +    +  Y +            +       L +++  + + 
Sbjct: 236 DSIIGAIVGGLIIGVLENVAEFFDSQYLH--------IGNMYDIAPFYVLLIILWFKPYG 287

Query: 339 LLRLRT 344
           L   + 
Sbjct: 288 LFGTKD 293


>gi|207723720|ref|YP_002254118.1| transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206588924|emb|CAQ35886.1| transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 289

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 93/305 (30%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +  +   GLS+ +G +  ++L        G Y  V+L +R G+     +P+
Sbjct: 8   LFDGLAYGCLLFLIGIGLSVTMGLMHFINLAHGAFAMAGGYVCVVLMNRLGVPFLATLPI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + + A G ++     +       +  ++ S     + +       G +   V      
Sbjct: 68  AFLATAAVGFVLERTLYRRLYRASPLDQVLFSIALVFMAMAGATYIWGPSQQPVELP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L   +    + +    +  +++  +  L+  +   + RT      R   DN +
Sbjct: 125 -----EALRGQWSVFDTGLEVGRYRLFLVGVVVVLTVLLGWLIERTRFGAQVRASVDNPQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +       FA+ S                     F     +  + +V +GG 
Sbjct: 180 ASAGLGINVGLVFSVTFALGSGL--AGLGGGLGIDVLGLDPAFPIKYMVYFLLVVAVGGA 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  +L                               ++   + L++++    
Sbjct: 238 GSIKGTLLAALVLGVFDVAGKYY--------------VPEVGAFVIYGLMVLLLVLFPGG 283

Query: 339 LLRLR 343
           LL  R
Sbjct: 284 LLGRR 288


>gi|108803398|ref|YP_643335.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
 gi|108764641|gb|ABG03523.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
          Length = 334

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/321 (13%), Positives = 89/321 (27%), Gaps = 25/321 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +  +  +AV   +       A  +Q  + ++        + A GL +V+  LG + 
Sbjct: 22  LERREAGIFAVAVALVVYFQAANAAFLTQGNLRALAQFAATTAIIAVGLVMVM-ILGEID 80

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+        AY +  +         LL+   A+        +   +      Y  + + 
Sbjct: 81  LSVGQ-----AYGFAPIVMYLAYERLLLVLPLAIAVALAATAVVGFANGALRVYFGVPSF 135

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           + +     +L     I  G       +                           + Y  +
Sbjct: 136 VATLGTFFLLGGLNVILTGGFPRPAPEESALKQ-----------------ALGAYPYAGI 178

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    +   +   L  T           N          +   ++  F + S   G AG 
Sbjct: 179 LWATGIMIIMHAVLNHTRWGIHTFATGGNFTGAREAGIRVDRIRIGNFMLCSVLGGFAGI 238

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGG--MTSLSKIAKATAILIGVVELCCGMNFYY 305
             A   D I P +         I+  ++GG  +           I   V+ +        
Sbjct: 239 IEAMRIDSIDPLVGGAEIMFYAIAAAVIGGTPLAGGVGTVIGAFIGTLVISILRNGFTLQ 298

Query: 306 FNSLLKFDCSFNMRHTTLMVI 326
             +  +F+    +    +M +
Sbjct: 299 GVNANEFNIILGVAVLIVMAL 319


>gi|282865880|ref|ZP_06274929.1| inner-membrane translocator [Streptomyces sp. ACTE]
 gi|282559204|gb|EFB64757.1| inner-membrane translocator [Streptomyces sp. ACTE]
          Length = 339

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 106/328 (32%), Gaps = 27/328 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           ++D  + +L V   ++         S++ +      I    + A  ++++V   G + L+
Sbjct: 21  RWDTAVGVLLVAVLVVGLAGTEGFGSRENLAFAFNDIAEVALIALPMTLLV-VAGQVDLS 79

Query: 70  CVIAYAIG-AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                 +G A +  +  + +     + + +   ++G       +  +      + I TL 
Sbjct: 80  VASMLGLGSALTGALWEAGWAFETIVPVVLLVGVAGGLLNGWLVTRVGLPSLAVTIGTLA 139

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +     ++ +    +T+                             +  +   F+ Y +L
Sbjct: 140 LYRGLASVALGSDAVTDFPQ------------------AYADWAVDTTTVPGTFLTYPVL 181

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
               L+A   + L  T +  +   I   ++A +     +   KL  F V+  F   AG  
Sbjct: 182 LFVVLAAVTAVVLHATGLGRSLFAIGSQEEAAYFSGVRVKRIKLLLFVVTGLFSAFAGVV 241

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMN 302
           F                 ++VI+ V+LGG+       +L        ++  +  L    +
Sbjct: 242 FTLRYGSA-RADNGLGFEMLVIASVLLGGVDFDGGKGTLFGAVAGVLLIGVLKNLLTLND 300

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFL 330
                 ++           T  V+A  +
Sbjct: 301 VAGEVQVIVTGLLLVASVLTPRVVAGVV 328


>gi|239624978|ref|ZP_04668009.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521364|gb|EEQ61230.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 288

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/306 (10%), Positives = 88/306 (28%), Gaps = 25/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY +     +++  S GLL+ +       GAY +            +L  +
Sbjct: 8   LITGVAMGFIYALVGIEYTLIWNSTGLLNFSHDKFILFGAYMFAGSYVLSLGLPPVLAIL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +++     ++   ++      L+     +             +  G+        ++ 
Sbjct: 68  CTVLTMFLLGMVSAFAIFNPLSKLSTNLFAV----------IGTVILGRIITECVRLIWG 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        F    ++       +++    ++A + ++ + T +  A R + +N+ 
Sbjct: 118 PLPFTLDNFLRGSFHLGPIVVSKAHIVIIVVCSIITAGLQIFFKTTKMGKAMRCVSENKT 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +         +S+      G       +                +  ++GG 
Sbjct: 178 AASLMGINVPMNIAFTVGLSALICATIGVLVIPIFNVELQMSSMIGLKG--FASGVIGGF 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L        +L  V      +    +   L F             + L + +L++   
Sbjct: 236 GYLPGAIVGGILLGVVEIFGSMIIPSVYKDCLSF-------------VLLIIFLLIKPSG 282

Query: 339 LLRLRT 344
           +L  R 
Sbjct: 283 ILGNRR 288


>gi|159038916|ref|YP_001538169.1| inner-membrane translocator [Salinispora arenicola CNS-205]
 gi|157917751|gb|ABV99178.1| inner-membrane translocator [Salinispora arenicola CNS-205]
          Length = 324

 Score = 56.8 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/315 (10%), Positives = 84/315 (26%), Gaps = 30/315 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY---------------VILGSR 87
             +  IY + A G ++V G L L++      + +G ++                 +    
Sbjct: 18  LSKGAIYALVALGYTLVYGVLRLINFAHSEIFMVGTFAILGAWSLLGVGDTPSIGMAIVY 77

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             + + +    S   +     +      +     L      +      + I    +    
Sbjct: 78  LLIGLVVGALASGATALTVERVAYRRLRRMNAPPLIFLITAIGLSLVLVEIYALWMAGFF 137

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
           +G   ++    +G     L +      +          +++    +   +  ++ RT   
Sbjct: 138 SGRGFSENRLVIGIPAL-LKQETVISVAGADITNVQIIMVVSALVMLYGLDQFINRTRYG 196

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
              R +  +      +        +  F +     G A   +      I+     F   +
Sbjct: 197 RGVRAVAQSPDTAALMGVHQDRVIMLVFVLGGLMAGAAALLWNMRYG-ITKFDIGFVVGL 255

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              +  +LGG+ +L        +L  +      +    +  +  F     +         
Sbjct: 256 KAFTAAVLGGIGNLRGALLGGLLLGVIEVYAATLTRSTWEDVAAFVVLVVVL-------- 307

Query: 328 LFLVILMRSHSLLRL 342
                + R   LL  
Sbjct: 308 -----IFRPTGLLGE 317


>gi|282864543|ref|ZP_06273598.1| inner-membrane translocator [Streptomyces sp. ACTE]
 gi|282560482|gb|EFB66029.1| inner-membrane translocator [Streptomyces sp. ACTE]
          Length = 296

 Score = 56.8 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 86/306 (28%), Gaps = 21/306 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G  ++  +  +++         G Y   +      +  W  + V
Sbjct: 8   LLGGLAIGSVYALIALGFVVIFKATEVVNFAHASLLLAGGYVTAV--LHDDIGFWPALGV 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +   G  +    ++           I++     ++        G   + + D    
Sbjct: 66  GVAGAAVVGAAVEFLVMRRYRGSDHSVLAIVTIGVDILITTELTRRMGTEVLSLGDPWGD 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              TV  +       ++FV+  + +   LL             R T+   + R   +N +
Sbjct: 126 GVVTVGGITLAQTRIAAFVVAGLLITLFLLAF-----------RYTSWGVSMRAAAENPQ 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    LSA+AV+ A   +A  F          +       +      ILGG+
Sbjct: 175 TAALMGIRLGRVSLSAWAVAGALAAVAALFLTV-FPTPGLERATSFAALKAFPAAILGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +       ++     L  G                      ++++        R   
Sbjct: 234 DSTTGALVGGLVVGVTESLATGYQGDLSFLGRGIGDLAPYLVMLVVLLV-------RPAG 286

Query: 339 LLRLRT 344
           L   + 
Sbjct: 287 LFGTKE 292


>gi|288960968|ref|YP_003451307.1| ribose transport system permease protein [Azospirillum sp. B510]
 gi|288913276|dbj|BAI74763.1| ribose transport system permease protein [Azospirillum sp. B510]
          Length = 340

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/320 (11%), Positives = 97/320 (30%), Gaps = 22/320 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L  +   +   +      S + + ++  ++ IY + A G++ V+   G + L      
Sbjct: 32  VLLFLIFLCVAFGISSPNFLSVRNVTNILTEVSIYGIVAVGMTCVI-LTGGVDLAVGSVL 90

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A GA +   + +  G   +  +     +  +C +      +  +   L            
Sbjct: 91  AFGALAGAWVVTNVGAGAFFGMGFLVALIISCAIGTLTGYIHGKTITLFNVP-------- 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                +     G      A  L   G  +      +R+     +  + +  ++L     +
Sbjct: 143 ----PFIVTLGGMTIWRGATLLMNDGAPIAGFDAGYRWWGRGDVLGVPVPVLVLFAVAAA 198

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             ++L   R         +  N +A       +    +S + +     G+AG   +A   
Sbjct: 199 GYVVLRYTR--YGRQIYAVGGNPEAARLTGINVPRVLVSVYVIVGFLAGLAGFLLSARLG 256

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                    S  + +I+ V++GG +          +      +   +      + L    
Sbjct: 257 SAEAIA-GTSYELRIIASVVIGGTS------LFGGMGGIGGTMIGALLIGVLLNGLVMMN 309

Query: 315 SFNMRHTTLMVIALFLVILM 334
                   +M + + L +  
Sbjct: 310 VSPYFQQIVMGVIIVLAVAF 329


>gi|153010889|ref|YP_001372103.1| monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC
           49188]
 gi|151562777|gb|ABS16274.1| Monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC
           49188]
          Length = 332

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 89/303 (29%), Gaps = 23/303 (7%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L         S   + ++     I ++ A G   V+     + L+     A    +  +L
Sbjct: 22  LFASRAPGFASAHNLANIFNDTSILIIVALGQMAVI-LTKSIDLSVAANLAFTGMAVAML 80

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            + Y     + + V A+  GA    +    +        + TL    I++ +        
Sbjct: 81  NATYPGLPLVFLIVLAIGIGAVLGAINGILVWKLNIPAIVVTLGTLTIYRGMAFVLSG-- 138

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                          G  V +      F ++     + +  +      + A + + L RT
Sbjct: 139 ---------------GAWVNAHQMTAPFLNTPRTPFLGLPLLGWTAILIVALVYVLLTRT 183

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
               A      N  A       +   +  AF +S A  G+ G  + +       D+    
Sbjct: 184 FFGRALYASGGNPTAAVYTGIDVGRTRFFAFVLSGALAGLCGYLWVSRYAVAYVDVAAGF 243

Query: 265 ENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           E   V + VI     LGG+ S++        L  +      ++   F  +        + 
Sbjct: 244 ELDSVAACVIGGISTLGGIGSVAGAVLGALFLGVIKNALPVIDISPFWQMAISGSVIILA 303

Query: 320 HTT 322
              
Sbjct: 304 VIF 306


>gi|311281459|ref|YP_003943690.1| inner-membrane translocator [Enterobacter cloacae SCF1]
 gi|308750654|gb|ADO50406.1| inner-membrane translocator [Enterobacter cloacae SCF1]
          Length = 324

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 96/306 (31%), Gaps = 27/306 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             +L         S     ++  QI   ++ + G++ V+   G + L+     A+ A   
Sbjct: 31  MVVLFSFLSDHFLSLNTFSTIANQIPDLMVMSVGMTFVLIIAG-IDLSVGSVLALSAAVV 89

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +       S WL      +++ A G + GL ++ +R                 + +   
Sbjct: 90  SVTYLNLHWSPWLAAIAGIVVATAIGSLTGLIAVIWRIPTFI------------VSLGML 137

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            I  G A      R  ++G++   L     F  S       +  ++           L L
Sbjct: 138 EIARGSAYQLTDSRTAYIGSSFDFLADPIAFGISPSFVIAVLVILV---------GHLVL 188

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            RT        I  N++A           K+  FA+  A  G+A  F  A  +   P+  
Sbjct: 189 TRTIFGRHLIGIGTNEEAVRLSGINPAPYKVVVFALMGALAGLASLFQVARLEAADPNGG 248

Query: 262 KFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
              E  ++ ++VI     +GG  S+        I+  +      +        +      
Sbjct: 249 VGMELQVIAAVVIGGTSLMGGRGSVICTFLGALIISVLAAGLAQIGASEPTKRVITGLVI 308

Query: 317 NMRHTT 322
            +    
Sbjct: 309 VVAVVL 314


>gi|254466629|ref|ZP_05080040.1| ABC transporter, permease protein [Rhodobacterales bacterium Y4I]
 gi|206687537|gb|EDZ48019.1| ABC transporter, permease protein [Rhodobacterales bacterium Y4I]
          Length = 289

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 94/302 (31%), Gaps = 27/302 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +         + A GL ++ G +G+++      +  GAY+ V L +   +  +L +   
Sbjct: 10  LNAVYAASYISLVAVGLVLIFGVMGVINFAHGELFMAGAYAIVALYAGLNVPFFLAVAAG 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +  G  G++M     +   D      +        +                       
Sbjct: 70  LLFVGCLGLLMERALFRPLKDNPLGGLVASIGFLMILQALAVMGFG------------VR 117

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +  + +     S  V   +   YV++    L +++  +L+RT    A R    + +A
Sbjct: 118 MVHIPPVTQEVIAFSDKVRLPVARLYVIIAAIVLLSALWYFLKRTRFGWALRASAQDPEA 177

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                 +I      A  + +   G+AGA  A             S  +    ++I+GG+ 
Sbjct: 178 AALQGISITQTARIAMFIGAGLAGIAGALTAPLVSV--NPHMGHSVIVTAFIVIIVGGVG 235

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           SL     A+     V              ++                 + +V++++   L
Sbjct: 236 SLEGAIVASVAYALVHTFVTTFWDGVLADIVGLS-------------LMLVVLIVKPTGL 282

Query: 340 LR 341
             
Sbjct: 283 FG 284


>gi|254445905|ref|ZP_05059381.1| amino acid or sugar ABC transport system, permease protein,
           putative [Verrucomicrobiae bacterium DG1235]
 gi|198260213|gb|EDY84521.1| amino acid or sugar ABC transport system, permease protein,
           putative [Verrucomicrobiae bacterium DG1235]
          Length = 326

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/320 (11%), Positives = 95/320 (29%), Gaps = 18/320 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           LN++  +L L  +V  L          + +   ++  QI + +  + G+++V+   G + 
Sbjct: 10  LNRFRSLLALGLMVIAL--SFLSEQFLTPENGFNILRQISVNLCLSIGMTLVI-VSGGID 66

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+      +       L     +   L +  + + +    ++  +      G        
Sbjct: 67  LSVGAILGLAGAVAAGLLKNGLVLPPLGV--ALVFTTTGAILAAVLVGGAAGWINGFVIT 124

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                     +    I  G   ++               +    F    +         +
Sbjct: 125 RFRIPPFVATLGMLSIARGLTMLWTGGFPVTGLGETFGKLGTGAFLGVPMP--------V 176

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             M  L+A  +   ++         +  N++A       +   K++ + ++    G+AG 
Sbjct: 177 WIMLVLAAVFVGVTKKARFGRYLYAVGGNERAARLTGLRVNRIKIAVYTLAGGLAGVAGL 236

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
              +  D   P+     E   + ++VI      GG  ++        I+  +      MN
Sbjct: 237 IVTSRLDSAQPNAGLGYELDSIAAVVIGGTSLSGGRGTVMGTVLGCLIIGVLNNGLFLMN 296

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F   +       +    
Sbjct: 297 VSPFWQQVIKGGVILLAVAI 316


>gi|111224995|ref|YP_715789.1| putative high-affinity branched-chain amino acid transport
           ATP-binding protein braF [Frankia alni ACN14a]
 gi|111152527|emb|CAJ64265.1| hypothetical protein; putative membrane protein; putative
           High-affinity branched-chain amino acid transport
           ATP-binding protein braF [Frankia alni ACN14a]
          Length = 1040

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 91/247 (36%), Gaps = 4/247 (1%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
               +          ++ +    + ++VG  G LSL  +    I A     L +  G  +
Sbjct: 324 WLLPRDWVDALDANALWALIILSVVVLVGFTGQLSLAQLAFSGIAALIAGRLVATRGWPL 383

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
              + V    +   G++  LP+L+ RG  LA+ TL +      +L +    +    G   
Sbjct: 384 EAAMAVGVAGTAVVGLLFALPALRTRGLQLAVVTLGLGAAVDALLFQRGYHSPPPPGAGG 443

Query: 153 ADRLY----FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
              L+        TV    RF   P   V        V +    L A  +  LRR     
Sbjct: 444 LGSLFGDLASPEGTVVGRQRFLGVPLDKVTDPRGFATVSVLAFVLVALAVANLRRGRAGR 503

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               +R N++A  +L  +++ AKL AFA+S+A  G  G  +A        ++        
Sbjct: 504 RLIAVRTNERAAAALGISVVAAKLYAFALSAAIAGFGGVLYAFYVYGERGNIDYGDGTFA 563

Query: 269 VISIVIL 275
             S ++L
Sbjct: 564 PFSSILL 570



 Score = 36.4 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 49/161 (30%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           +         +Y + A G+ ++    G+L++      A  AY++  L   +GL + L   
Sbjct: 7   FALLSLGTGALYALVAAGVVVIARGAGVLNMAQGALVAWAAYAFHGLHGPWGLPLGLAAV 66

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           ++   +   G+   +  ++   +  A+  L+ +     IL     +    A       L 
Sbjct: 67  LAVASTAGIGVGFQVLVMRPLREATALLRLMATLGLLIILQSSLTLMFAGAVRTSPTVLP 126

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                +                   +        F +  + 
Sbjct: 127 TGTVELFGESVGVDVFVRLAAVVAVVAAAWAVFRFTTVGLA 167


>gi|75674862|ref|YP_317283.1| branched chain amino acid ABC transporter permease [Nitrobacter
           winogradskyi Nb-255]
 gi|74419732|gb|ABA03931.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Nitrobacter winogradskyi Nb-255]
          Length = 297

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 93/304 (30%), Gaps = 19/304 (6%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +Y + A G S++ G +  +++     + +GAY+ V +              +
Sbjct: 11  LNGLTVSALYFIVAIGFSLIFGLMRSVNMAHGTLFLVGAYAGVAVFYPLYDD---GNAYA 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +I+ A G+                           + I    I   +            
Sbjct: 68  WIIALAAGISASAILGVVLQIVFLGWMQGQELRQTLVTIGISIIVADQLLAIFGGLSQQF 127

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                              Y  F  + ++    +   + L L+RT +    R   D++  
Sbjct: 128 YAPDILFGSVPVPFVQGGQYSTFRLFQVVVAIGVGFGLWLILQRTKLGIVVRAGVDDRAM 187

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +    +    +  FA+ +A  G+AG     ++        +F      + +VI+GGM 
Sbjct: 188 LAAQGVNVPLISVVIFAIGAALAGLAGVIGGTAQPFGQEKDIEFLLTS--LVVVIVGGMG 245

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           SL   A    ++    +    +              F      L ++ +  V+  R H L
Sbjct: 246 SLPGTALGALLVGMAEQFGQSL--------------FPAYSVMLTLLIMVAVLAFRPHGL 291

Query: 340 LRLR 343
           L  +
Sbjct: 292 LGRK 295


>gi|119714671|ref|YP_921636.1| inner-membrane translocator [Nocardioides sp. JS614]
 gi|119535332|gb|ABL79949.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Nocardioides sp. JS614]
          Length = 361

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 45/317 (14%), Positives = 99/317 (31%), Gaps = 13/317 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              + V       L   + ++   + SM     +  +   G++ V+   G+  L+     
Sbjct: 42  FIAVTVGLFAYFALSEPSFRTSGALFSMLKFASVTAILGLGMTFVMAVGGM-DLSIGSTA 100

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +      +    Y L+    + V  +   A G++  +  +  +   L +ATL +  + Q
Sbjct: 101 GLSVQMAAMTMVFYNLNGGAAVVVVLLAGVAVGLLNAVLIVLCKIPDL-LATLGVMFVIQ 159

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +      +  +G+ + D     G    S +R        V Y + M  VL  + +  
Sbjct: 160 GSKLIPVDGQSVASGMVLPDGTPAPGKFTESFLRIDGGTLGPVPYPVIMMLVLTTVSWFI 219

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +      RT     +  I  N +A       +   +  A+ + S F  + G    +   
Sbjct: 220 LA------RTKWGRIFYAIGANPEASRLAGVRVGLYRGLAYVLCSVFASIGGLILVSRIG 273

Query: 255 RISPDMFKFSENIIVISIVI---LGGMT--SLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           +   +    S    V   ++   + GM   +         ++  V+       F Y+   
Sbjct: 274 QGDVNAGASSLLEAVAVALVGTSVLGMGKPNAWGTLLGALLIGIVLTGLTMKGFQYYYQD 333

Query: 310 LKFDCSFNMRHTTLMVI 326
                   +       I
Sbjct: 334 TAKGLVLIVALLFSFTI 350


>gi|218295335|ref|ZP_03496148.1| inner-membrane translocator [Thermus aquaticus Y51MC23]
 gi|218243967|gb|EED10493.1| inner-membrane translocator [Thermus aquaticus Y51MC23]
          Length = 298

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 57/310 (18%), Positives = 106/310 (34%), Gaps = 39/310 (12%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+   G+ +L+Y   A    +V    G LSL     + +GAY   +      +     +
Sbjct: 24  AYLLDAGVFLLLYTALALSWDLVA-RTGQLSLAHGAFFGLGAYGVGL--LEPHVGTLPAL 80

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              ++++G   +++G  +L+  G Y AIA+L  SE+ + + +K    T G  G+ V    
Sbjct: 81  LSGSLLAGLSALLLGSVTLRLHGLYFAIASLAFSEVLRTLALKLP-FTGGPIGLPVPP-- 137

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             +F    +  YY+   +  ++  + LW   +    A    R +
Sbjct: 138 ------------------AFGGAPLAPYYLAFAVLAVAVGLSLWAEHSPFRLAQAACRQS 179

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS-PDMFKFSENIIVISIVIL 275
           +     L   ++  KL +  + S   G+AG  +A     I+  + F     +  + I I 
Sbjct: 180 EPVARVLGVRVVRVKLLSLLLGSLVAGLAGGVYAMKALFINPYEAFSLGRAVEALVIPIF 239

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ +                                       +  +    L L IL  
Sbjct: 240 GGLYT--------------TLGPLLGGVVLVGLEQVLRLWIQEGYLVVYGAILILAILFL 285

Query: 336 SHSLLRLRTP 345
              LL L   
Sbjct: 286 PRGLLGLWRR 295


>gi|17988412|ref|NP_541045.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Brucella melitensis bv. 1 str. 16M]
 gi|17984194|gb|AAL53309.1| high-affinity branched-chain amino acid transport system permease
           protein livh [Brucella melitensis bv. 1 str. 16M]
          Length = 332

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 49/317 (15%), Positives = 103/317 (32%), Gaps = 19/317 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I  L+  M + GL+++ G +G+L+      Y +GAY    L    G  + +LI  
Sbjct: 24  VLNGAIYGLLLFMVSAGLTLIFGMMGVLNFAHASFYMMGAYFAYTLQPLTGFWLAILIAP 83

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +       ++    +  R      A  ++     +++I                  + 
Sbjct: 84  VIVGIVGIVGVLVERFILRRVHAFGHAHELLVTFGLSVVIAEVIKIFYGN--------FA 135

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + + ++F  F    V Y  +  ++      +   I L L RT I    R+     +
Sbjct: 136 VEYRIPAALQFSAFDLGGVSYPFYRLFIGAVALVMFLLIYLLLTRTRIGIVVRSAIYRPR 195

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-----------FKFSENI 267
              +L   +    +  F V +   G+AG+   A                           
Sbjct: 196 MVEALGHNVPLVFMGVFGVGAFLAGLAGSVAGAFYTTNPNMALELGVMVFVVVVVGGLGS 255

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  ++     +  LS +A    + I  +    G+  Y            +    TL    
Sbjct: 256 LGGAMFASLLIGILSSVAVGVKVSIASLLDYVGLGDYAREIGGVLTLEVSSIAATLPFFL 315

Query: 328 LFLVILMRSHSLLRLRT 344
           + +V+L+R   L   + 
Sbjct: 316 MLIVLLVRPSGLFGAKE 332


>gi|301052319|ref|YP_003790530.1| ribose ABC transporter permease [Bacillus anthracis CI]
 gi|300374488|gb|ADK03392.1| ribose ABC transporter, permease [Bacillus cereus biovar anthracis
           str. CI]
          Length = 311

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 96/312 (30%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLALIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +     +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMAV--GLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMVIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|317054294|ref|YP_004118319.1| inner-membrane translocator [Pantoea sp. At-9b]
 gi|316952289|gb|ADU71763.1| inner-membrane translocator [Pantoea sp. At-9b]
          Length = 297

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 83/304 (27%), Gaps = 16/304 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +I    ++     + A GLS+V G +   ++  +     GA+            +  ++
Sbjct: 3   SFILDTLMRTADLSLVALGLSLVYGLVRFANIAHMQYAMTGAFLTAGGLQLGMPLLLAML 62

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + +      ++             A A +    +   ++                   
Sbjct: 63  LSALLCGTLSVVLHHWVFQPLLKSGTANAMIGSLAVSMVVIAVMLGAEGSA--------P 114

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + S+        S       +  ++L + F           T    A R +  N
Sbjct: 115 VSFNLPLGSMWTLAGARISSDRLFSLVTTLVLILVFALVLFT-----TPQGRAVRALASN 169

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++   +          +   V+     + G+  A                + V++  ILG
Sbjct: 170 RELAAASGLNASAIVHTVNLVAGMLASLGGSMMAMQGSA--YINQGNDLMLPVLAAAILG 227

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +         ++     L   ++F    +           +    V+ L   + +R 
Sbjct: 228 GLGNPLGAVFGALLIAMTETLITNVDFGSLINGEMAFVPVTWVNACSFVMLLLA-LWLRP 286

Query: 337 HSLL 340
           + L 
Sbjct: 287 YGLF 290


>gi|209515449|ref|ZP_03264315.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209504169|gb|EEA04159.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 286

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 55/304 (18%), Positives = 107/304 (35%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       ++  + A GL+I +G +  ++L       +G Y+ V+  SR G+  +  +P+
Sbjct: 5   LFDGIAYGMLLFVLASGLAITLGLMNFVNLAHGAFAMVGGYATVLAMSRLGVPFFCALPL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + S   G I+     K       +  ++ +     + I       G    ++    + 
Sbjct: 65  AFVASALLGGILERTLYKRVYGQSELNQVLFTIGLTFMAIATVDYFMGSTQQFLNLPEWL 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G TV           + +    +  +V+L    L  ++ L L RT   +  R   D+ +
Sbjct: 125 QGRTV----------FAGIGIGYYRLFVILVCVVLVIALQLILTRTRFGSRLRASVDDPR 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   I F  L+ FA  S   G+ GA  A         +F     I  + +V +GG 
Sbjct: 175 AASGLGININFVFLTTFAFGSGLAGLGGALGANMLGL--DPIFPLKFMIYFLVVVAVGGT 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TSL+    A+ +L                               ++   + + ++ R   
Sbjct: 233 TSLTGPLLASLLLGIADVAGKYY--------------IPDLGAFIIYGVMIITLMWRPQG 278

Query: 339 LLRL 342
           L   
Sbjct: 279 LFAR 282


>gi|110634838|ref|YP_675046.1| inner-membrane translocator [Mesorhizobium sp. BNC1]
 gi|110285822|gb|ABG63881.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Chelativorans sp. BNC1]
          Length = 317

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 65/299 (21%), Positives = 117/299 (39%), Gaps = 25/299 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
               Q Y   + I ++ YV  A   ++  G  G +SL  V  + IGAY          L 
Sbjct: 21  PFFMQAYGLGLLIGLMGYVTLASAWALFSGRTGYISLATVAFFGIGAYMVA--AFNEVLP 78

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             L++ V+A+   A  +++GL +L+  G Y  I T  ++E+ + ++  ++    G  G Y
Sbjct: 79  YPLVLVVAALAGLALALVVGLSTLRLAGVYFVIFTFGLAELVRQLVTWYEINVTGTLGRY 138

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           +   L                          +Y+ LL +   +  I   + R+ +  A R
Sbjct: 139 IFMSLGPEH----------------------IYWQLLALAAATLFITWRIDRSRLGLALR 176

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENIIVI 270
            I D++     L   +   KL+ FA+SS  I + GA  A     I P   F  + + + +
Sbjct: 177 VIADDEVVAAHLGINLARTKLALFALSSVIITLVGAVQAPRWTYIEPAIAFNPTVSFLTL 236

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            + +LGG + L         L  + E        +++ LL       +      ++AL 
Sbjct: 237 VMALLGGASRLWGPVLGAVPLFLLFEWLSANFPNHYSILLGLLFIAIVFAVPKGIVALV 295


>gi|238750343|ref|ZP_04611845.1| Ribose transport system permease protein rbsC [Yersinia rohdei ATCC
           43380]
 gi|238711576|gb|EEQ03792.1| Ribose transport system permease protein rbsC [Yersinia rohdei ATCC
           43380]
          Length = 294

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/307 (9%), Positives = 88/307 (28%), Gaps = 23/307 (7%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +   ++        +   + ++  Q  +  + A G+++V+ + G + L+     A+    
Sbjct: 1   MLIAVVSSLSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLALTGAV 59

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
              +      ++  +    A+ +   G+   + +                + F   L+  
Sbjct: 60  AASIVGLEVNALVAVGAALALGAFVGGITGVIVAK------------GKVQAFIATLVMM 107

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +            +    T V     +F      +   + +   +  M  +  +    
Sbjct: 108 LLLRGVTMVYTNGSPVNTGFTEVADTFGWFG-----IGRPLGVPTPIWLMAIVFIAAWYM 162

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L  T +      +  N+ A      ++   K+  +++      +AG    A      P  
Sbjct: 163 LHHTRLGRYIYALGGNESATRLSGISVDRVKIIVYSLCGLLAALAGIIEVARLSSAQPTA 222

Query: 261 FKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
               E   + ++V     + GG   +        IL  +      +    +  ++     
Sbjct: 223 GTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVV 282

Query: 316 FNMRHTT 322
             +    
Sbjct: 283 ILLAVLV 289


>gi|254252500|ref|ZP_04945818.1| hypothetical protein BDAG_01731 [Burkholderia dolosa AUO158]
 gi|124895109|gb|EAY68989.1| hypothetical protein BDAG_01731 [Burkholderia dolosa AUO158]
          Length = 345

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 96/311 (30%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +V  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 46  VLLVLCVGFGFMTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 104

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A + ++  +  G   WL +PV+  +    G I G      R     +    M+       
Sbjct: 105 AVASLLASTIPGW-GWLGVPVALAVGLVFGAINGGLISLLRLPPFIVTLGAMT------A 157

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++      G        +L               F        + + ++++  C + A  
Sbjct: 158 VRGVARLIGNDTTVFNPQLS--------------FAFIGNGTILGVPWLVVIACAVIAIS 203

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   +L  +A S    G+     AA     +
Sbjct: 204 WFILRRTVLGMRIYSVGGNPEAARLSGINVRAIQLFVYAASGLLAGLGAVMSAARLYAAN 263

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 264 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLTNGLVLLGVSDIWQYII 323

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 324 KGLVIIGAVAL 334


>gi|119387493|ref|YP_918527.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119378068|gb|ABL72831.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Paracoccus denitrificans PD1222]
          Length = 322

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/323 (10%), Positives = 85/323 (26%), Gaps = 16/323 (4%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++++ +     +  V   +L      A  +   I ++  +     + A G++ V+ + G 
Sbjct: 1   MKIDLHTLGPLVALVALVILGAALNSAFLAPANITNVLARSAFIGLIAVGMTFVI-TAGG 59

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           L L+     A  A   +I  +    +  L      +  G   +   L             
Sbjct: 60  LDLSVGSMAAFLAGIAIIAMNAALPTTGLNWGTILIGMGVAILGGVLAGYLNGALVTKAR 119

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                     + I    +T    G  ++                  +          + +
Sbjct: 120 IEPFIVTLGTMSIFRSLVTWLADGGTLSLDYGLRTLYRPVYYGGIGW----------ITW 169

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            ++    ++      +R +        I  N +        +   +L  + +    +G+A
Sbjct: 170 PIITFAIVAILGEWTMRHSRFGRHVEAIGSNDRVARYSAIDVNRMRLLTYVLLGVLVGLA 229

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCG 300
              +       S       E   + +++I      GG   +        IL  +  +   
Sbjct: 230 VVLYVPRLGSASGSTGVLWELEAIAAVIIGGTALKGGRGRVWGTVVGVLILSLIDNILNL 289

Query: 301 MNFYYFNSLLKFDCSFNMRHTTL 323
            +               +    L
Sbjct: 290 ADLVSPYLNGAIQGVIIVLAVVL 312


>gi|330879250|gb|EGH13399.1| putative sugar transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330880241|gb|EGH14390.1| putative sugar transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 330

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 92/313 (29%), Gaps = 29/313 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V  L++ L   A  +   + ++  Q+ I  + A G++ V+   G + L+     A
Sbjct: 35  FVGLLVVTLVMILASDAFLTASNLSNIARQVSINAIIAVGMTCVI-LTGGIDLSVGPVMA 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L                + +G    ++          YL +  +I++     
Sbjct: 94  LSGTLTASLLIAGLPPGLA------IGAGMLTGVVFGIGNGLFVAYLHMPPIIVTLATMG 147

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I      +     G  ++    + G   R  +     P   ++   F+ YV+L       
Sbjct: 148 IARGLGLMY--TDGYPISGLPEWFGFFGRQSLFGIEVPILIMLITYFLTYVVL------- 198

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                 + T I      I  N++A           KL  + +S     +AG    +    
Sbjct: 199 ------QHTRIGRYIYAIGGNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMS 252

Query: 256 ISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                      +  I+ V+L      GG   +        +L  +      +    +   
Sbjct: 253 -GQPNAGIGFELDAIAAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQS 311

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 312 VIKGGIILLAIYI 324


>gi|312109601|ref|YP_003987917.1| inner-membrane translocator [Geobacillus sp. Y4.1MC1]
 gi|311214702|gb|ADP73306.1| inner-membrane translocator [Geobacillus sp. Y4.1MC1]
          Length = 293

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 73/288 (25%), Gaps = 14/288 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      IY + A G  I     G+L+L+      +GA   +   +     I  ++  
Sbjct: 11  LFSGLTVGSIYALVALGFVITYSITGILNLSQGDFAMLGALICISFVNSGFPFIIAILLS 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++    G+         R    A   +I              +               
Sbjct: 71  IVLVMIIGGLFERSAIHPARYSSTATLIIITIGAAFVFRGIAIFVWG------------T 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +R             + +    + +       A +  +  +T +  A      N  
Sbjct: 119 QPYALRPFTGNDSLQIFGAVIQTQNIWAIGISLVSLAVLYFFFNKTYMGKAVTACVVNPF 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +          A  +S+    +AG   A      +         +      ++GG+
Sbjct: 179 AARLMGIQPRKMSFGAIVISAGLGALAGIIIAP--ISGASYDMGVMIGLKAFIAAVIGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           T+         I+  +     G     +   + F     +       I
Sbjct: 237 TNAPAAIAGAFIIGILEAFTEGYFSSGYKDAISFGLLLLVLFFMPNGI 284


>gi|229083900|ref|ZP_04216207.1| Ribose ABC transporter [Bacillus cereus Rock3-44]
 gi|228699421|gb|EEL52099.1| Ribose ABC transporter [Bacillus cereus Rock3-44]
          Length = 311

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 95/312 (30%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLALIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +     +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAIAV--GLLAGLVMGIVNGIIITKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y   +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFFGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGVLAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|254475107|ref|ZP_05088493.1| inner-membrane translocator [Ruegeria sp. R11]
 gi|214029350|gb|EEB70185.1| inner-membrane translocator [Ruegeria sp. R11]
          Length = 440

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 85/248 (34%), Gaps = 21/248 (8%)

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF------- 169
            R DYLAIATL ++EI   ++     ++ G   +    R       +++   F       
Sbjct: 193 LRSDYLAIATLGIAEIIIAVMKNEDWLSRGVKNVIGLPRPMPYEVDLQNDAEFVAKAADY 252

Query: 170 --FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                 +S +  ++    +   +  +   +     ++      R IRDN+ A  ++   +
Sbjct: 253 GLDPVLASTLYVKLGYSLMFTVVLLVLLWMAQMALKSPWGRMMRAIRDNEVAAEAMGKNV 312

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS-ENIIVISIVILGGMTSLSKIAK 286
               L  F + SA  G+AGA       +++P  +       ++  +VI+GG  +      
Sbjct: 313 TRRHLQIFVLGSAICGIAGAMMTTLDSQLTPGTYNPLRFTFLIWVMVIVGGSGNNFGSVL 372

Query: 287 ATAILIGVVELCCGMNFYYFNSLLK-----------FDCSFNMRHTTLMVIALFLVILMR 335
              ++  +      M      ++                S        M + L LV+   
Sbjct: 373 GGLLIWFLWIKVEPMGLLLIETITAGLSDGSAVKAHLLDSAAHMRLLTMGLILLLVLRFS 432

Query: 336 SHSLLRLR 343
              LL  R
Sbjct: 433 PRGLLPER 440



 Score = 38.7 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 37/96 (38%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
            L +  ++        L  + S      +    L+  + A G+++  G  GL ++  +  
Sbjct: 11  FLFVGVLILLEGSTNALFFSGSWNSALLILNMGLVSAIMALGVNLQWGFAGLFNVGIMGF 70

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMI 109
            A+G  + V++ S      W    V  +++   G +
Sbjct: 71  VALGGLAVVLVSSAPTPGAWSQGGVGIIMALVMGAM 106


>gi|163798045|ref|ZP_02191985.1| ABC transporter permease protein [alpha proteobacterium BAL199]
 gi|159176702|gb|EDP61275.1| ABC transporter permease protein [alpha proteobacterium BAL199]
          Length = 312

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 46/325 (14%), Positives = 94/325 (28%), Gaps = 26/325 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L +    L               S  I  ++  + A G++++ G L +++      Y +
Sbjct: 9   ILMLELDALAACLSTPACLVNQTTSGLIIGMLLFLVASGVTLIFGVLHVINFAHGSFYML 68

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GAY    +    G         +   + +  +       +  G  L +  L+       I
Sbjct: 69  GAYFAFTVYQVTGNYFLAAAAGALGAAISGIVFERFIISRVYGQNLLMQLLVCYAFILII 128

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
               K +   +                    R   +  +      F  +++     +   
Sbjct: 129 DDLVKIVWGAEYLAMGIPA----------EFRLPPYRVAGGYVPPFYLFLVAMAVLIGIG 178

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +L + +T      R    N     +L   +       F +  A  G+AGA  A  R   
Sbjct: 179 SLLIVTKTRFGKIVRAAAQNAPMVSALGIRVNVYFALLFGLGCALAGVAGALAAPVRSL- 237

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
                     +    + ++GGM S+     A  IL     +       + +         
Sbjct: 238 -TPGMGLGILVESFIVTVIGGMGSIPGAFLAAIILGLTRSIGSVGFPLFVDGA------- 289

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                  M + + LV++ R   LL 
Sbjct: 290 -------MFMIMALVLIFRPTGLLG 307


>gi|89053873|ref|YP_509324.1| inner-membrane translocator [Jannaschia sp. CCS1]
 gi|88863422|gb|ABD54299.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Jannaschia sp. CCS1]
          Length = 343

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 47/344 (13%), Positives = 109/344 (31%), Gaps = 52/344 (15%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---------------- 82
           + +   +   Y + A GL+++ G+LG+++      + +GA+  V                
Sbjct: 8   VLNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMLGAFIAVTLRRVLNLSFETIDET 67

Query: 83  -----------------------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
                                  +  +    S+ + + ++  I    G+ M    +K   
Sbjct: 68  RTDFLGNPMAVDTPYVEYWFGPEMGSAIIDWSVPIAVLLAIPIMALIGVAMERGLIKHFY 127

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
                  ++++     +L +      G   I       F+G+          F    ++Y
Sbjct: 128 KRPHADQILVTFGLAIVLQEIIKAFYGANPIPTPAPQAFVGSFDFGA--LIGFDPFTIMY 185

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
             +          +  ++  +LR T      R    +++    L   I    +  FA+++
Sbjct: 186 PYWRLVYFAFSMVIIGAVFAFLRFTTFGMVVRAGMADRETVGLLGIDIDRRFVIMFAIAA 245

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
              G+AG  +            +F     V+ +V    M SL     A  +L  +     
Sbjct: 246 IVAGLAGVMYTPILSPNYHIGMEFLVLSFVVVVVGG--MGSLPGAVAAGFLLGILQS--- 300

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                 F S+ +        +  ++ +   +V+L R   L+  +
Sbjct: 301 ------FASMSQIIEIIPGINQVIIYLVAVIVLLTRPRGLMGRK 338


>gi|217958254|ref|YP_002336800.1| ribose ABC transporter, permease protein [Bacillus cereus AH187]
 gi|229137468|ref|ZP_04266079.1| Ribose ABC transporter [Bacillus cereus BDRD-ST26]
 gi|217063699|gb|ACJ77949.1| ribose ABC transporter, permease protein [Bacillus cereus AH187]
 gi|228646026|gb|EEL02249.1| Ribose ABC transporter [Bacillus cereus BDRD-ST26]
          Length = 311

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 95/312 (30%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLALIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +              +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLA--MTVGLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|161620707|ref|YP_001594593.1| inner-membrane translocator [Brucella canis ATCC 23365]
 gi|260568069|ref|ZP_05838538.1| branched-chain amino acid ABC transporter [Brucella suis bv. 4 str.
           40]
 gi|161337518|gb|ABX63822.1| inner-membrane translocator [Brucella canis ATCC 23365]
 gi|260154734|gb|EEW89815.1| branched-chain amino acid ABC transporter [Brucella suis bv. 4 str.
           40]
          Length = 328

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 43/343 (12%), Positives = 96/343 (27%), Gaps = 28/343 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+  +  L +       L  +  ++    +G       + ++  +I+   +    L +V 
Sbjct: 1   MTELTQPLPQTRHSYAGLIGIVAIIAASVVGWFLFPDNL-ALLTRIIAIALLVLSLDLVT 59

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           G  G+ +L     +  GAY   I  + +      L+  +  +     G++ G   L+  G
Sbjct: 60  GYCGIATLGHAALFGAGAYGAGIAAAHFGVTDPILMTVIGLLAGAVTGLVSGAVILRATG 119

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
               + ++ +  +F     K    T G  G+         G               F +Y
Sbjct: 120 LAQLVLSIAVVHLFHEAANKASGWTGGSDGLSGISPDPIFGI------------FEFDLY 167

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              +Y   + +  +S   + ++ R+ + +                        S      
Sbjct: 168 GRTVYIYAVILLLISFIFLRYVVRSPLWHVVPGREGRPDPHPRHGRFGARRATSHVCDFR 227

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
                             P   +             GG  SL      T + +   ++  
Sbjct: 228 RGCRYRRRSQRNLHTGRRPRQSQLHHVGGSPCHAGAGGAGSLFGGLVGTVVFMWFEDVVS 287

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             N +++               T++   L  V+L     L   
Sbjct: 288 TANPFHW--------------LTMVGALLIAVVLFAPRGLYGT 316


>gi|114763545|ref|ZP_01442950.1| putative permease of ABC transporter [Pelagibaca bermudensis
           HTCC2601]
 gi|114543825|gb|EAU46837.1| putative permease of ABC transporter [Roseovarius sp. HTCC2601]
          Length = 288

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 86/287 (29%), Gaps = 16/287 (5%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
             M   +   V+ A GL+I+ G + +++        +G Y+ VI           ++ ++
Sbjct: 9   LEMVRAVAWLVLLASGLAIIFGMMRIINFAHGEFLMLGGYTVVISTGHGVNEWIAMLVLA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            ++ G  G+++    ++     +  + L    +   ++     I                
Sbjct: 69  PIVVGIFGVLVERLVIQRLYGRILDSLLATWGLSMLMIGGVTMIFGNSVTGVATP----- 123

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                                 + + ++     L  +I   L+ T      R    N   
Sbjct: 124 ---------LGGMSIGAYQVPRYNFVLIFAAIALLLAIWAVLKFTKAGLIARATMQNPDM 174

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L     +  ++ F + SA  G AGA  A     +       +        VI GG +
Sbjct: 175 SEALGIPTRWVYMATFGIGSAITGFAGALLAPLTGVV--PTMGVNFIAQSFITVITGGAS 232

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            ++    A  +L  + +    +    +        +  +       I
Sbjct: 233 VITGTLSAATLLGSISQGMTFLTGPVYGDAALLLAALVLLRLLPQGI 279


>gi|29833694|ref|NP_828328.1| sugar ABC transporter permease protein [Streptomyces avermitilis
           MA-4680]
 gi|29610818|dbj|BAC74863.1| putative simple sugar ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
          Length = 357

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 100/320 (31%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +    + AV   +  F    + +    + ++  Q  +  + A  +++++   G   
Sbjct: 35  LARPEVGALIAAVGVYVFFFAVAPSFRDASALSTVLYQASVMGIMALPVALLM-IGGEFD 93

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A    A +  IL  +  +++W  + V+ ++S A G   G   +K       +   
Sbjct: 94  LSAGVAVTTSALTAAILSFQLTMNVWTGVFVALLVSLAVGAFNGWLLIKTGLPSFLVTLG 153

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               +                 +         G      +    F    V ++I + Y L
Sbjct: 154 SFLVLQGA---NLAVTKIFTDNVASDSIADMDGFEQAKKVFASEFDIGGVSFKITIVYWL 210

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +      A+    L RT   N    +  N+ +  ++   +   K++ F    A     G 
Sbjct: 211 VFA----AAATWLLLRTKFGNWIFAVGGNKDSARAVGVPVGLTKIALFMGVGAGAWFVGM 266

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
               S + +       +E + +I+ VI      GG  S         I   V +     N
Sbjct: 267 HLLFSFNTVQSGEGVGNEFLYIIAAVIGGCLLTGGYGSAIGPVIGAFIFGMVSQGIVYAN 326

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
           +              +    
Sbjct: 327 WNPDWFKAFLGAMLLVAALV 346


>gi|260463845|ref|ZP_05812042.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259030442|gb|EEW31721.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 707

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 72/261 (27%), Gaps = 16/261 (6%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
           + I  L  VV        +        +     Q+  + M   G+++V+   G + L+  
Sbjct: 31  NAIPFLALVVTLATFGSIIPGFFKLTSLQESTRQLGEFSMVVTGMTVVM-LGGGIDLSVG 89

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +A+  +S V +      SIWL +  S       G I G      R        +    
Sbjct: 90  SIFALSCFSAVYVFFILEQSIWLALAASLAAGLVFGAINGYLVGYLRLRAFLTTLVTFIF 149

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                 I                    L T    ++ F    + + +       ++L + 
Sbjct: 150 GRALFDILVT----------TYAADVQLSTATSDVLDFIGDSTFWGLSVSVWLAIILAIV 199

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
              A       R+        +  ++++  +    +       +  S     + G   A 
Sbjct: 200 THVAL-----TRSRPGWHVLAVGGSRRSAHNAGIRVRRTVFMTYVFSGFCASIGGFLIAC 254

Query: 252 SRDRISPDMFKFSENIIVISI 272
                 P      E + + + 
Sbjct: 255 RLSGAGPGTGLNLEIMALTAA 275


>gi|229010094|ref|ZP_04167308.1| Ribose ABC transporter [Bacillus mycoides DSM 2048]
 gi|229056436|ref|ZP_04195849.1| Ribose ABC transporter [Bacillus cereus AH603]
 gi|229131612|ref|ZP_04260494.1| Ribose ABC transporter [Bacillus cereus BDRD-ST196]
 gi|228651838|gb|EEL07793.1| Ribose ABC transporter [Bacillus cereus BDRD-ST196]
 gi|228720910|gb|EEL72459.1| Ribose ABC transporter [Bacillus cereus AH603]
 gi|228751227|gb|EEM01039.1| Ribose ABC transporter [Bacillus mycoides DSM 2048]
          Length = 311

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 98/312 (31%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLVLIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        ++    +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMVV--GLLAGLAMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|156742090|ref|YP_001432219.1| monosaccharide-transporting ATPase [Roseiflexus castenholzii DSM
           13941]
 gi|156233418|gb|ABU58201.1| Monosaccharide-transporting ATPase [Roseiflexus castenholzii DSM
           13941]
          Length = 340

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 96/321 (29%), Gaps = 22/321 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             + D  + L  +    L  L   +  +   + ++     ++V  A G +IV+   G ++
Sbjct: 27  FRRSDASVVLAVLFLFALFSLSNPSFLTSFNLFNISRTAALFVFIALGQAIVI-VAGGMN 85

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+      +            G S W+ + ++ +    CGM  G   +K R +       
Sbjct: 86  LSLGAIGGLTVVVAGWCMDTMGWSPWVGVSLALLTGMLCGMFNGFIVVKMRLN------- 138

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                  ++ I    I     G   ++         R                I + Y+L
Sbjct: 139 SFVVTLASLFIFTGLIQGISQGFPYSNIPKEFTILGRGDF-------------IGIPYLL 185

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    +   +    +   +         N +A              +  +S  F  +AG 
Sbjct: 186 LLALVVLMVMEYVFKFRIVGRHLLATGGNPEAARLSGIRTDRVIFLSHTLSGLFAAIAGL 245

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            + +               II  ++ I+GG         A  IL   + L    N     
Sbjct: 246 LWVSRMGSAQ-PSTGADWLIISFAVAIIGGTALNGGAFSALGILASALLLTLIRNGLIML 304

Query: 308 SLLKFDCSFNMRHTTLMVIAL 328
           ++  +     +    L+ +++
Sbjct: 305 NVNVYFEQTFLGLIVLLAVSI 325


>gi|293607542|ref|ZP_06689876.1| urea ABC superfamily ATP binding cassette transporter, membrane
           protein [Achromobacter piechaudii ATCC 43553]
 gi|292813975|gb|EFF73122.1| urea ABC superfamily ATP binding cassette transporter, membrane
           protein [Achromobacter piechaudii ATCC 43553]
          Length = 289

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 91/289 (31%), Gaps = 15/289 (5%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y   +   I I  + + GL++V G + +++L       +G Y  ++  +++G+ IW+ + 
Sbjct: 7   YAIDILGAIAILALLSVGLAVVFGMMKIINLAHGEFMMLGGYVAILATNQWGVPIWISML 66

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           V A +      ++    L        I T++ +      +I    +  G           
Sbjct: 67  VLAPLIVGIFGVLVEHLLVRHLYGRMIDTMLATWGLSLAVIGLATMVFG----------- 115

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
              TTV                  +  +++     +  ++   LR T      R    N 
Sbjct: 116 --NTTVGISSPLGGITIGARQASGYTLFLIALAAGVMLALWCLLRFTDFGLRARACMQNA 173

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +L           F + +A  G+AGA  A     I       +        VI GG
Sbjct: 174 AMANALGMNPNGVYKMTFGLGAALSGLAGAVLAPLTGVI--PTIGAAYIAKAFITVISGG 231

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
              ++    A  I   + +    +    +  +     +  +       I
Sbjct: 232 SAVIAGTVSAAGIFGAISQGVTFLATPVYGQVALLLAAIVLIRLLPQGI 280


>gi|239815905|ref|YP_002944815.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239802482|gb|ACS19549.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 317

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 111/320 (34%), Gaps = 27/320 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M + GL+++   +G+L+      Y +GAY          +  W  + +
Sbjct: 10  LLNGVSYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYIAY--TLSGIVGFWPALFI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  G      SL+    +  +  L+++     ++++   +  G++ +        
Sbjct: 68  APLLVGLLGAAFERYSLRRVHKFGHVPELLVTFGLSYLILELVQLAWGRSTVPYGLPP-- 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   ++   F      +     +++L    +  S+ L L RT I    +    +  
Sbjct: 126 -------QLQGPLFSLYGTQFPKSRSFIMLVAVLMLISVWLLLTRTRIGLVIQAALKHPD 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    +  F   +A      A        ++      S   I+  +V++GGM
Sbjct: 179 MVEALGHNVPRVFMLVFGGGAAL--AGLAGVVGGNTYVTEPAMAASVGSIIFVVVVVGGM 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT--------------TLM 324
            SL+    A+ ++  +      M+  +   L     +   +                 L 
Sbjct: 237 GSLAGAFLASLLIGIIQTFAVAMDQSFAGGLQMLGFTVTDQTFGYELLKLTISQVAPILP 296

Query: 325 VIALFLVILMRSHSLLRLRT 344
            + L L+++ R   LL  R 
Sbjct: 297 YLFLVLILIFRPKGLLGTRE 316


>gi|153010728|ref|YP_001371942.1| monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC
           49188]
 gi|151562616|gb|ABS16113.1| Monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC
           49188]
          Length = 333

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 91/313 (29%), Gaps = 17/313 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  +L  +      S   + ++  +     + A G + V+ S G L L+     A
Sbjct: 26  FIALALLLVLGTIANPNFISIDNLLNVATRSAFIAIIALGATYVI-SSGGLDLSVGAMVA 84

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             A   ++  +   ++  +++ ++A++                     I   I +     
Sbjct: 85  FVASIMILFMNSGVIADPVMMLIAAVMLALIVGAACGLLNGLITTVGGIEPFIATLGTMG 144

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I                         T+R+      +  ++    + +   ++ +   +A
Sbjct: 145 IYRGLTTW-----------LSQGGAITLRNPDIQALYRPAYFGSILGVPVPVIVIFVTAA 193

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L RT        +  N+        ++   +  AF +    + +A   +      
Sbjct: 194 LAAFVLYRTRYGRHVIAVGSNEDVARYSGISVKKVRTIAFIIQGLCVAVAVLLYVPRLGS 253

Query: 256 ISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            S       E   + ++V+      GG+  +        IL  +  +    NF     L 
Sbjct: 254 TSATTGLMWELQAITAVVVGGTALRGGVGRIWGTICGAFILEIIGNIMILSNFVSEYLLG 313

Query: 311 KFDCSFNMRHTTL 323
               +  +    +
Sbjct: 314 AIQGAIIIIAMLV 326


>gi|160901989|ref|YP_001567570.1| inner-membrane translocator [Petrotoga mobilis SJ95]
 gi|160359633|gb|ABX31247.1| inner-membrane translocator [Petrotoga mobilis SJ95]
          Length = 309

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 102/302 (33%), Gaps = 13/302 (4%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
               L+FL + A      +     +  +Y +    L++++G +G+L+L       +G Y 
Sbjct: 13  FLMFLVFLVIIAIWKPIPLIYGLQRGGLYSLIGLPLALILGIVGILNLAHGDFLTLGLYI 72

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             I  ++ GL   + +    ++     + +   S+++      +  L+++     ++I+ 
Sbjct: 73  GYIFFTQLGLDPLISVFPLFILMFLLAIGIYQISIRYVLKAGELNQLLLTFGISMVVIEL 132

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             I                   + +         S     I+ +   +    +   + L+
Sbjct: 133 IKIIW-----------TTRPRNIYTPYASSSITISNFSIGIYEFLYPIVAIGVLIFLQLF 181

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L++T +  A R +  N K    +        L  FA++   IG+A               
Sbjct: 182 LKKTLLGQATRAVGQNPKGAEIVGIDTNKVYLIVFAIAFGIIGIAAGIMLPRTSIFPLSG 241

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
             ++     ++   + G+ +L+ I      L  V  +   +  Y   S L F     +  
Sbjct: 242 NAYTLKSFALAA--MAGLGNLNGILIGGITLGVVEAVVQSIPGYSGWSDLVFFGVLIIVI 299

Query: 321 TT 322
             
Sbjct: 300 LI 301


>gi|157363052|ref|YP_001469819.1| monosaccharide-transporting ATPase [Thermotoga lettingae TMO]
 gi|157313656|gb|ABV32755.1| Monosaccharide-transporting ATPase [Thermotoga lettingae TMO]
          Length = 323

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 43/317 (13%), Positives = 102/317 (32%), Gaps = 29/317 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++ +  V+   L F   G   S   I ++  Q  I  + A  +  V+   G + L+    
Sbjct: 19  LIIIFLVLAVFLAFATKGTFLSFGNITNLLRQTSINGVVALAMLFVI-ITGGIDLSVGSV 77

Query: 74  YAIGAYSYVILGS---RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
             +    + +L S   ++  S +  + ++ ++S   G+  G      +      ATL M 
Sbjct: 78  VGLSGMVFAMLTSSRLQFQFSTFQAVVIALLVSIFVGVGDGFAVHDLKVPPFI-ATLGMM 136

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
              + +++                   ++ +        + F +      + +  ++   
Sbjct: 137 TFVRGLVM-------------------YISSGRMITGIPYSFVNFSSENILDIPKLVWLW 177

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++  + + L+ T        +  N++A      ++      A+AVS    G+AG   A
Sbjct: 178 VVMAVIVTIVLKYTKFGRNLYALGSNKEAARLSGISLRLNYYGAYAVSGLLSGIAGIMLA 237

Query: 251 ASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           +      P   +  E   + S+VI      GG  +         ++  +      +    
Sbjct: 238 SRLAAGVPTAGQGYELDAIASVVIGGASLSGGTGTALGTVIGALLIQTLRNGGNLLGIDP 297

Query: 306 FNSLLKFDCSFNMRHTT 322
           F   +            
Sbjct: 298 FVMQMAIGLIIIAAVFF 314


>gi|91789177|ref|YP_550129.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91698402|gb|ABE45231.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas sp. JS666]
          Length = 293

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 95/309 (30%), Gaps = 33/309 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS------YVILGSRYGLSI 92
           + +      +  + A GL ++ G   +++L C   YA+GAY+      + +         
Sbjct: 8   LLAGVFHAAVLFLVASGLQLIFGVQRIVNLACGSIYALGAYAGIAATHWALSIGLPPPWF 67

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            L +  + +  G  G+ +        G   +   L+   +   I    +           
Sbjct: 68  PLALLGAGLAVGLVGIPLERLLRTIYGRQESFQLLLTFALVLMIQDTLRFFWGA------ 121

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                         + +       V   ++   V+     L+A++  +L  T      R 
Sbjct: 122 -----NPQQLGNLSMLYGTLAIGEVSMPLYNACVIGAAIGLAAAMAFFLGHTRWGKIVRA 176

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
             +N+ A  ++   +    L  F + +    + GA  A      +         +   ++
Sbjct: 177 TAENRDASAAMGVNVQLVYLVVFTLGTMLGTVGGALVAP--TAAASLEMGVELVVEAFAV 234

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           V++GG+ S+   A    I   V      +              +       +   + +V+
Sbjct: 235 VVIGGLGSMKGAAVGALIAGLVRAAAVTV--------------YPEAEILAIYAIVLVVL 280

Query: 333 LMRSHSLLR 341
           + +   L  
Sbjct: 281 VWKPAGLFG 289


>gi|300871923|ref|YP_003786796.1| monosaccharide transporting ATPase QYMF [Brachyspira pilosicoli
           95/1000]
 gi|300689624|gb|ADK32295.1| monosaccharide transporting ATPase, QYMF [Brachyspira pilosicoli
           95/1000]
          Length = 326

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 97/283 (34%), Gaps = 27/283 (9%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           +         +     ++  Q+ +  + A G ++++   G++ L+C    A+      + 
Sbjct: 28  VSSFLNSNFLTFANFSNISSQLAVTTILACGATMLI-ISGMIDLSCGSVLALAG-VLSVA 85

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
             +   ++ L I V+ ++   C +I G+   KF+      ATL M  + +   +K+    
Sbjct: 86  SYKATNNMILAILVAIIVGVICNLINGIMITKFKVPPFI-ATLAMLTMARGAALKYTNGQ 144

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
           N                            +      I + +++L +      +       
Sbjct: 145 N---------------IYQIGKYTILGQGTLPGGIPISVLFLILFVILTWYIL----THK 185

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            +      I  N++A  +    +  +K+  F ++  F+G AG  F +  +   P+     
Sbjct: 186 KLGRELYAIGGNEEAAIASGINVNKSKIEVFIINGIFVGFAGVLFMSRNNVGLPNGAVSY 245

Query: 265 ENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
           E   + + VI      GG+ +         I+  +  +   + 
Sbjct: 246 ELKALTAAVIGGTSFSGGLGTAQGTIAGAFIVGFLDNIMTLIG 288


>gi|167564774|ref|ZP_02357690.1| ABC transporter permease protein [Burkholderia oklahomensis EO147]
          Length = 340

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 95/311 (30%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +   L      + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 41  VLVLLCIGFSLMTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 99

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S      WL IP + ++  A G++ G      R     +    ++ +     
Sbjct: 100 A-VASLLASNIPGWGWLGIPAALLVGLAFGVVNGGLISFLRLPPFIVTLGALTAVRGIAR 158

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    +G           F        + + ++++    + A  
Sbjct: 159 L--------------------MGNDTTIFNPQLPFAFIGNGSILGVPWLVVIALAVVAIS 198

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   +L  +A S    G+     AA     +
Sbjct: 199 WFILRRTVLGMRIYSVGGNPEAARLSGINVRGIELFVYASSGLLAGLGALMSAARLYAAN 258

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 259 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLSNGLVLLGVSDIWQYII 318

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 319 KGLVIIGAVAL 329


>gi|46198645|ref|YP_004312.1| branched-chain amino acid transport system permease protein livH
           [Thermus thermophilus HB27]
 gi|46196268|gb|AAS80685.1| branched-chain amino acid transport system permease protein livH
           [Thermus thermophilus HB27]
          Length = 285

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 91/284 (32%), Gaps = 13/284 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A GL++ +G +G+++        +GAY   +L +  G+   L + +
Sbjct: 8   LLNGVLMAGVYALVATGLALSLGVVGIVNFAHGEFLMLGAYLSYLLFAFRGVDPLLSLGL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G +     ++       +  ++++      L     +  G     VA     
Sbjct: 68  AFLAAFLVGALTYHGLIRPVLKAPELNQMLLTFGLSVFLQNLALLLFGADTRVVAPP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                    +                   L    L   +  +L R+ +  A R +  N+ 
Sbjct: 125 --------YQAATLALGPFFLGAVPLGAFLLSLALLLLLQAFLTRSRLGLAVRAVAQNRV 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L        L AF +S+A  G+AG   +            F   +   +IV L G+
Sbjct: 177 APGLLGIEAEAVYLLAFGLSAALAGVAGVMLSVMLYA--SPTVGFLFTLKSFAIVALAGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            +L  +  A  +L     L           +             
Sbjct: 235 GNLKGVIPAALVLALAEALVSTYVPGGGGLVEAVFFLVLFLALV 278


>gi|163938591|ref|YP_001643475.1| monosaccharide-transporting ATPase [Bacillus weihenstephanensis
           KBAB4]
 gi|163860788|gb|ABY41847.1| Monosaccharide-transporting ATPase [Bacillus weihenstephanensis
           KBAB4]
          Length = 311

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 97/312 (31%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLVLIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +     +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMAV--GLLAGLAMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|293396097|ref|ZP_06640378.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
 gi|291421595|gb|EFE94843.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
          Length = 323

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/322 (12%), Positives = 92/322 (28%), Gaps = 27/322 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           L+ N  D    +  ++             +   + ++  Q  I  + A G+++V+   G 
Sbjct: 17  LKFNLRDAGTVIGLLIIVATFSFLSPVFFTVPNLLNILQQSSINAIIALGMTLVI-ISGG 75

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+ A     L          ++    + +        L +           
Sbjct: 76  IDLSVGPTAALSAVLGATLMVSGVPVPLAIMATLGVGALCGVFSGTLVA----------- 124

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L  +     G +       ++  G  +  +   FR   +  +  I    
Sbjct: 125 --------YAGLQPFIVTLGGLSLFRALALIFTGGNPIFGIPLEFRMLINSSLLGIPTPI 176

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +++ +      +++   +T +      +  N++A       +   K++ F +S     +A
Sbjct: 177 IIVLVIATLLWVLMN--KTPLGEYILAVGGNEEAARVAGVPVRKTKVTVFIISGVLASLA 234

Query: 246 GAFFAASRDRISPDMFKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
                       P M    E        +    ++GG  S+        IL  +      
Sbjct: 235 SLILIGRLGAAEPTMGNLWELDAIAAAAIGGASLMGGKGSIIGTIVGAIILGALRNGLTL 294

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +N   F  LL       +    
Sbjct: 295 LNIQAFYQLLATGVIIIIAMLI 316


>gi|289705964|ref|ZP_06502338.1| amino acid or sugar ABC transport system, permease protein
           [Micrococcus luteus SK58]
 gi|289557301|gb|EFD50618.1| amino acid or sugar ABC transport system, permease protein
           [Micrococcus luteus SK58]
          Length = 471

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/298 (11%), Positives = 88/298 (29%), Gaps = 7/298 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +          ++ + G++I     GL ++     +  GA      G    L   + + +
Sbjct: 108 LTETLTVATPLIIISLGIAIAF-RAGLFNIGGQGQFIFGAMFATWFGVHLHLPAGVHLLL 166

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++    G++ G      +    A   ++   +    +     + N         R   
Sbjct: 167 VVVMGVLGGVLWGSVVGVLKAWTGAHEVILTIMLNYVAVNLLAYLLNTP-----VLRAPA 221

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V + +         +  +  +++               ++R+ +    R +  N  
Sbjct: 222 TTNPVSAPLDRSAMFPRLLGTDFRLHWGFFVALLAVLFTWWLMQRSTLGFRLRAVGANPD 281

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  +   ++  + L+A A+S    G+AGA   A  +         S     I++ +L G 
Sbjct: 282 AARTAGISVRGSYLAAMAISGGLAGLAGATHVAGTESTLNTSVAGSFGFDAITVALL-GR 340

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           +    +  A  +   +      M       +       ++    +    L   I    
Sbjct: 341 SHPVGVLFAGLLFGALRAGGVTMQTETGVPVDIVLVVQSVIVLLIAAPPLVRAIFRLP 398


>gi|126459461|ref|YP_001055739.1| inner-membrane translocator [Pyrobaculum calidifontis JCM 11548]
 gi|126249182|gb|ABO08273.1| inner-membrane translocator [Pyrobaculum calidifontis JCM 11548]
          Length = 291

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 43/282 (15%), Positives = 87/282 (30%), Gaps = 13/282 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +  S  I   IY +   GLS++ G L + ++       IGAY+     + +G+  +L  
Sbjct: 5   PFFLSGIIIGSIYGLTTLGLSLIFGVLRVANVAHGSFIMIGAYTAFFAFTLWGIVPFLSA 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +   +    G ++ L  +K       + TL+        + +   +  G          
Sbjct: 65  ALGFGLGALMGYLVYLGVIKPLRKMGELHTLVALFALGMFIAEVARVLWGPD-------- 116

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 V        F  + +  +       +    ++ +I   L++T +  A R +  +
Sbjct: 117 -----FVGYRWSIGSFSVAGLEVDYGKALGAVFALVVALAIDFMLKKTYLGRAVRAVVQD 171

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 +   +      A A+  A   M G                    +I   I +LG
Sbjct: 172 PVGAQVVGVNVDRVYAFAAALGIAITTMGGVLLTLFIPVGINPYMGGPYTLIGFVIAVLG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           G+ S+     A  I   +  +      Y   +       F  
Sbjct: 232 GLGSVLGAYVAGLIFGIIESVGFYAFSYLGFAEPSQMALFTA 273


>gi|330816620|ref|YP_004360325.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia gladioli BSR3]
 gi|327369013|gb|AEA60369.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia gladioli BSR3]
          Length = 311

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 48/299 (16%), Positives = 98/299 (32%), Gaps = 22/299 (7%)

Query: 55  GLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
           GL+++   LG+L+      Y +GAY  V+L +R+      ++    +      +   L  
Sbjct: 24  GLTLIFSLLGVLNFAHASFYLLGAYFGVLLAARFDPWAAFVLAPLLVGGLGALVERLLLR 83

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
                 +L    L     +               G  +A     L  TV + +    F  
Sbjct: 84  RVRAQGHLGEMLLTFGLAYLI-----------AEGAKLAWGAAPLAATVPAGLDGTWFTL 132

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
               +  +  +V+L    +  ++ L LR +      R    ++ A  +L   +       
Sbjct: 133 YGAAFPRYRGFVMLVSVAMLLALGLLLRVSQTGRIVRAALTHRAAVEALGHDVPRLTTLV 192

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
           FA  +A   +AGA  A     +       +   +V ++V++GG+ SL     A+ ++   
Sbjct: 193 FAAGTALAALAGAIGAPL--TVVEPSMAGTVGSVVFAVVVIGGLGSLGGAFLASLLVGCA 250

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHT---------TLMVIALFLVILMRSHSLLRLRT 344
                       +       +                +  + L  V++ R+  L   R 
Sbjct: 251 QTFAVASTASLGSLADALGAALPDAWRALSVARCAPLVPYLLLVAVLVGRARGLFGERE 309


>gi|325972009|ref|YP_004248200.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy]
 gi|324027247|gb|ADY14006.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp.
           Buddy]
          Length = 293

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/291 (11%), Positives = 82/291 (28%), Gaps = 13/291 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI--WLLI 96
           + +      +Y + A G ++V   L   +       +  AY        +  +    + I
Sbjct: 6   LINGISLGAVYALIAVGFAVVFSVLKFSNFAHGGMISACAYIGFFFQRSFDPAPSILVTI 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + +      +++ L + +      +             +I  + +  G +    A   
Sbjct: 66  LFTGLCGMGIALLLDLIAYRSIRKNKSPNIYYFLSSLTISIIIEQILNIGYSKNPYAYP- 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   ++     F    +        ++     +   +IL + +T +  A R +  N
Sbjct: 125 --------NIFSSNFFMIGSLRVSTMDTMIMAISLLILMLMILVITKTKMGLAIRAVAIN 176

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 +        +  F ++    G++G    A            +  I      ++G
Sbjct: 177 ADTSRLMGINSGVVVVMVFIIAGFLAGVSGVLLGAKYSV--YPDLGQTMMIKGFIASVIG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           G+ SL     A  +L  +          +   ++ F             IA
Sbjct: 235 GLGSLGGAIAAAVLLGVLEIFWTYFFGAFSAPVMLFILMLLFLFIRPQGIA 285


>gi|284161324|ref|YP_003399947.1| inner-membrane translocator [Archaeoglobus profundus DSM 5631]
 gi|284011321|gb|ADB57274.1| inner-membrane translocator [Archaeoglobus profundus DSM 5631]
          Length = 279

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/301 (10%), Positives = 87/301 (28%), Gaps = 32/301 (10%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           I   I  + A G ++  G   + +      +AI AY+     + +    +  + +  + S
Sbjct: 11  ILGGILTLVACGFTLTFGVGRIFNFAHGTFFAISAYTAY---ALFPYLGYSSLLIGVLAS 67

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
              G+ M       R + + +  L +S                     +   ++ +    
Sbjct: 68  ALFGLAMHYLIKPIRRNEIMVILLTLSLALLV--------------EQIILMIFGVDAIS 113

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
            + I         V                  ++   +++T +      +  + ++   +
Sbjct: 114 IAPIIKGSINLFGVEVTNVKILSFAITIASMIALERLIKKTRLGREISAVSQDVESAMIV 173

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              I    +    +SS   G+ G  +A           +     +  +IV++GG+ S++ 
Sbjct: 174 GIDIERVFMFTLLISSILAGIGGILYAQIYSLTPNSALEILL--LAFAIVVVGGLGSVNG 231

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
              +  I+  +      +    ++ L        +                R   L  + 
Sbjct: 232 SVVSAFIISYIKTAVSVLLGTRWSELAVLIVIIAILIV-------------RPQGLFGVE 278

Query: 344 T 344
            
Sbjct: 279 E 279


>gi|167834891|ref|ZP_02461774.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Burkholderia thailandensis MSMB43]
          Length = 324

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 59/325 (18%), Positives = 113/325 (34%), Gaps = 23/325 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L A +  L     +    +  Y        L   + A G++++   LGL+ L+      +
Sbjct: 2   LAATLGTLAAIALVVPAVADAYWIKTLTSALTVSIAAAGVALLYRQLGLVCLSQHALLGV 61

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G +   +  +  G    L +   A    A GMI GLP+L+ RG YLA+ TL+M+  FQ +
Sbjct: 62  GGWI-ALRLAHLGAPFELCVIAGAAGGSAIGMIAGLPALRLRGLYLALVTLMMAGGFQVV 120

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                    G                +    R           +   +  +     L+ +
Sbjct: 121 ASAIGFPDGGGG----------FTGHLSFGARQMMARPLAGQSDAAYFRYVAAWAALAFA 170

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +I   RR+    +W  IR  +    +    ++F +  AF ++    G++G   A S  ++
Sbjct: 171 LIELHRRSKAGRSWALIRRGEMPALAAGVNVVFYRTWAFGLAGLLAGLSGGLLAGSVGQL 230

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
               F  SE++++ ++ ++GG+           +L  V  L                   
Sbjct: 231 DGRAFAASESVLLFALSVVGGVYHWFGALITGLLLRAVPALLTDFG------------VN 278

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                     AL   ++     +  
Sbjct: 279 GYLAMIFFGAALLHALITAPAGIAG 303


>gi|86359235|ref|YP_471127.1| sugar ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86283337|gb|ABC92400.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           CFN 42]
          Length = 334

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 85/300 (28%), Gaps = 17/300 (5%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                     + ++  +     + A G + V+ S G L L+     A  A   ++L +  
Sbjct: 39  VNPNFIGITNLANVATRCAFIAIIAVGATFVI-SAGDLDLSVGSMVAFVASLMILLINSG 97

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            ++  +L+  +A++       +   +         I   I +     I            
Sbjct: 98  VIADPVLMLTAAVVFTVIAGALCGLANGLITTVGKIEPFIATLGTMGIYRGLTTW----- 152

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                        T+RS      +  ++    + +   ++ +  ++A     L RT    
Sbjct: 153 ------LSQGGAITLRSSDIQTLYRPAYFGNILGLPVPIVVILAVTAIAAFILYRTRYGR 206

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               +  N          +   +  AF +    + +A   +       S       E   
Sbjct: 207 HVVAVGSNSDVARYSGIAVNRVRTIAFVIQGLCVAIAVLLYVPRLGSTSATTGILWELQA 266

Query: 269 VISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           + ++V+      GG   +        IL  V  +    NF     +     +  +    +
Sbjct: 267 ITAVVVGGTALKGGAGRVWGTICGAFILELVGNIMLLSNFISEYLIGAIQGAIIIIAMLV 326


>gi|16331004|ref|NP_441732.1| high-affinity branched-chain amino acid transport permease
           [Synechocystis sp. PCC 6803]
 gi|1653499|dbj|BAA18412.1| high-affinity branched-chain amino acid transport permease protein
           [Synechocystis sp. PCC 6803]
          Length = 286

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/291 (12%), Positives = 80/291 (27%), Gaps = 13/291 (4%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            + I +      I  + A GL++  G L L +        + AY      +        +
Sbjct: 4   SQLIFNGIAVGSIIALGAVGLTLTYGILRLSNFAHGDFMTLAAYLTWWANTSGINLWLSM 63

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
                    A  +   L     R       TLI+  I   + ++   +            
Sbjct: 64  ALGCVGTIIAMFIGEWLLWKPMRARRATATTLIIISIGLALFLRNGILLIWGGNNQNYRV 123

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                + +E +   V+         + L L+RT +  A R + D
Sbjct: 124 PIVPAQDFMG-----------IKFEYYRLLVIAMAIAAMVVLHLILQRTKVGKAMRAVAD 172

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N          + +  +  + +++    + G+ +             +   + + + VIL
Sbjct: 173 NVDLAKVSGINVEWVVMWTWVMTAVLTALGGSMYG--LMTTLKPNMGWFLILPMFASVIL 230

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           GG+ +         I+    E+        +   +       +       +
Sbjct: 231 GGIGNPYGAIAGGIIIGVAQEVSVPWFGTSYKMGVALLLMIIILFIRPQGL 281


>gi|158315381|ref|YP_001507889.1| inner-membrane translocator [Frankia sp. EAN1pec]
 gi|158110786|gb|ABW12983.1| inner-membrane translocator [Frankia sp. EAN1pec]
          Length = 289

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/307 (10%), Positives = 82/307 (26%), Gaps = 28/307 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      +Y +   GL I+  +  +++           Y  ++        +  L+  
Sbjct: 8   VISGIASGAVYGLMGLGLVIIYRATDVVNFALASMATFAVYVALMCADNGWGVVGGLVAA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                    ++            L  A L+M+     I+        G         +  
Sbjct: 68  VVTAVVLGLVVREAVIRPLGSGQLFAA-LVMTMAVSLIMESVVSDIWGTQPRAFPPLVTG 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +   S +                  ++        ++     RT + +A R + ++  
Sbjct: 127 DTSIGASTLANQD------------LVMIGVAGLAMLAVGWLFTRTMLGSAMRAVAESSD 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +  +       A+ +      +A   +A         +          + + LGG+
Sbjct: 175 TAEIIGISSQRVARIAWGLGLGLAALAAVLYAPKSGLAPTVLSAPL--FRAFAGIFLGGL 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+         +  +  L        F               T +   + L++L+R   
Sbjct: 233 TSMYGAVVGGLAIGVLENLAASYVSANF-------------RDTFVFAFIVLILLVRPQG 279

Query: 339 LLRLRTP 345
           +   R+ 
Sbjct: 280 MFGTRSF 286


>gi|108804714|ref|YP_644651.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
 gi|108765957|gb|ABG04839.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
          Length = 347

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/313 (9%), Positives = 90/313 (28%), Gaps = 21/313 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +     +             + + + ++G Q+    + A G++ V+ +   + L+    Y
Sbjct: 38  VLTALAMLVFAGSFVAPGLWAPQNMLNVGQQVAQIGIMAVGMTFVIITA-QIDLSVGSIY 96

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +L ++   +          + G                YL I + I++    
Sbjct: 97  ALAAVVTGLLLTQGSPAWVAC------LGGLAVGFCAGLVNGLTTVYLHIPSFIVTLGTL 150

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           +       +         +                      F +  +   +++L   F  
Sbjct: 151 SAFRGLTLLL-----TNGSPISLDANQANVQTFSLLGQGLLFSVVPMEFAFLILTFIFGY 205

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +      T        +  + +A       +   +L++F +       +G    +  +
Sbjct: 206 VLLAW----TKYGFYVYAVGGSAEAARLCGINVARVRLTSFVILGTLSAFSGILGLSFLN 261

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +     +  E +++ +++I      GG  ++       A++  +  +        F  +
Sbjct: 262 YVQGVTGQGLELVVISAVIIGGTALFGGSGTMLGTLIGVALIGVLQNILVLSGLSSFWQI 321

Query: 310 LKFDCSFNMRHTT 322
           L       +    
Sbjct: 322 LVVGVVVILAVAL 334


>gi|295835196|ref|ZP_06822129.1| sugar uptake ABC transporter permease [Streptomyces sp. SPB74]
 gi|295825360|gb|EDY44840.2| sugar uptake ABC transporter permease [Streptomyces sp. SPB74]
          Length = 320

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 91/290 (31%), Gaps = 31/290 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    VV  L+   F     S +   +  +Q+   V+ A G+++ +G+ G + L+     
Sbjct: 25  VYAGVVVLLLVNIAFTPHFLSTENFRTQAVQVAPIVIVALGMALAIGTEG-VDLSVGAVM 83

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      +      +   L+  +  +++G                 LA   L+     Q
Sbjct: 84  ALATSLLSLYLGYGLVPALLMAALGGVLAG-----------------LASGALVAFVGVQ 126

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+     +  G         L  +       +R     +      + + Y+++    L+
Sbjct: 127 PIVATLALMVGG-------RGLALVLLPQLKDVRNSGMNTLGTGSVLGIPYLVIIAAVLA 179

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   +RRT        I D++ A       +    +  + VS     +AG    A   
Sbjct: 180 VVVAFVVRRTTFGRQLLAIGDSRAAAKLAGLPVRRVLVIVYVVSGLLAAVAGILATARLQ 239

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELC 298
              P        +  I+ V++      GG   +        ++  +    
Sbjct: 240 ASDPTSLGTLMELSAITAVVVGGTPLSGGRVRIGGTVAGAVLIQLLTATL 289


>gi|330977941|gb|EGH77844.1| inner-membrane translocator [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 259

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 79/259 (30%), Gaps = 9/259 (3%)

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           + V   A+   +  +      L +      + +++ A G  +   + +   +   +  LI
Sbjct: 2   SYVAFMALAGLAM-LGIHSLPLLMIAGFAAAIIVTSAYGYSIERVAYRPLRNSNRLIPLI 60

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
            +      L     ++ G     + + L          + F    +  V+       V +
Sbjct: 61  SAIGMSIFLQNSVQLSQGSGNFAIPNLL-------PGSLSFGPGGAEEVLISYMQIVVFV 113

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
                   + L++ R+ +  A R   ++ K    L           F V +A   +A   
Sbjct: 114 VTLVAMTGLTLFISRSRMGRACRACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAML 173

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            +     I+P+   F   +   +  +LGG+ S+        +L         +    +  
Sbjct: 174 LSMQYGVINPNA-GFLVGLKAFTAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKD 232

Query: 309 LLKFDCSFNMRHTTLMVIA 327
           ++ F     +       I 
Sbjct: 233 VVAFGLLVLVLLFRPTGIL 251


>gi|289625376|ref|ZP_06458330.1| sugar ABC transporter, permease protein [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289647524|ref|ZP_06478867.1| sugar ABC transporter, permease protein [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298487618|ref|ZP_07005659.1| Inositol transport system permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|298157710|gb|EFH98789.1| Inositol transport system permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|320327994|gb|EFW83999.1| sugar ABC transporter, permease protein [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330867785|gb|EGH02494.1| sugar ABC transporter permease [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330986320|gb|EGH84423.1| sugar ABC transporter permease [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 341

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 47/319 (14%), Positives = 96/319 (30%), Gaps = 26/319 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + L+ +   L+  LF    + Q ++ +      M +Q+ I  + A G++ V+ + G + L
Sbjct: 27  IFLVLIGIGLIFELFGWIVRDQSFLLNSQRLVLMILQVSIIGLLAIGVTQVIITTG-IDL 85

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+ A     L              S         +  LP        L +  L 
Sbjct: 86  SSGSVLALSAMIAASLAQ-----------TSDFSRAVFPSLTDLPVWIPIVVGLGVGLLA 134

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
            +     I I   P      G+ V+ R      T    +       + +        + L
Sbjct: 135 GAINGSIIAITGIPPFIATLGMMVSARGLARFYTEGQPVSMLSDSYTAIGQGAMPVIIFL 194

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +        + LR T        I  N +A  +    +    +  ++++    G+AG  
Sbjct: 195 VVA---VIFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLVIVYSIAGLLAGLAGVV 251

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            +A        M    E   + + VI      GG+  ++       IL  +      +  
Sbjct: 252 ASARAATGQAGMGMSYELDAIAAAVIGGTSLSGGVGRITGTVIGALILGVMASGFTFVGV 311

Query: 304 YYFNSLLKFDCSFNMRHTT 322
             +   +       +    
Sbjct: 312 DAYVQDIIKGLIIVVAVVI 330


>gi|229028467|ref|ZP_04184588.1| Ribose ABC transporter [Bacillus cereus AH1271]
 gi|228732848|gb|EEL83709.1| Ribose ABC transporter [Bacillus cereus AH1271]
          Length = 311

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 97/312 (31%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLVLIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +     +++G    I+    +        IATL    IF+ 
Sbjct: 73  LASALVAGMMASGMDPFLAMAV--GLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|251797607|ref|YP_003012338.1| inner-membrane translocator [Paenibacillus sp. JDR-2]
 gi|247545233|gb|ACT02252.1| inner-membrane translocator [Paenibacillus sp. JDR-2]
          Length = 293

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 87/306 (28%), Gaps = 25/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I S      +Y + A G S+     G L+++      +G           GL   L    
Sbjct: 8   IISGLAVGCLYAVIALGYSLTYVVNGTLNMSQGQLVMVGGVLLFGFSEHAGLPFPLAFAA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++     +++   +++           ++S I   I+I+   +        V      
Sbjct: 68  SILLVALLNLVIERLAIRKFDKGANSVEWVLSTIAVGIIIQDVALYFNGPDEGVVPSPAG 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G         +     F      +           A +IL+ +++      R   DN+ 
Sbjct: 128 SGMLRIMDAGIYWKEFIFFPIVGALL----------ALLILFYQKSHWGLWLRATADNRT 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +          A+ +S    G+ GA  +   +            +  IS+ IL G+
Sbjct: 178 AVEMMGINSGRVVAVAYVLSGLLAGIGGALMS--TNYAVSVDVGLPLGLKAISVAILAGV 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +   I     +L                                +   + LV+  +   
Sbjct: 236 NNPKGIVGTGLLLGVAEVFIGQYIS-------------TAFREMFVYGIVILVLYWKPMG 282

Query: 339 LLRLRT 344
           L  +R 
Sbjct: 283 LFNVRK 288


>gi|83644035|ref|YP_432470.1| ribose/xylose/arabinose/galactoside ABC-type transporter permease
           [Hahella chejuensis KCTC 2396]
 gi|83632078|gb|ABC28045.1| Ribose/xylose/arabinose/galactoside ABC-type transport system,
           permease components [Hahella chejuensis KCTC 2396]
          Length = 349

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 91/306 (29%), Gaps = 18/306 (5%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGI-QILIYVMFAWGLSIVV 60
                 L+    +  + A+   L  F+   +  +      + I Q+ +  + A G++ V+
Sbjct: 23  KRMPPELSILMVLFGIAALFEVLGWFIVGQSFLANMSRLQIIILQVSVIGIIAVGVTQVI 82

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
              G + L+     A+ A               +              ++ +P +     
Sbjct: 83  -ITGGIDLSSGSVVAMTAMIAATFAQDSNWPKII-----------YPALVDMPFVVPLAA 130

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
            L I  L        I     P      G+ V+ R      T  S +  F    + +   
Sbjct: 131 GLLIGALAGFINGWLITKTKIPPFIATLGMMVSARGIARWYTDGSPVSGFTESFTMLGSG 190

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  +  ++    ++A   + +R T        I  N +A       I    +  + ++  
Sbjct: 191 LGRWAPVVVFLLVAAFFHVIMRYTRFGKFTYAIGANPQAARVSGINIDAHLIKVYMIAGL 250

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVV 295
             G+A     A        M    E   + + VI      GG   ++       IL  ++
Sbjct: 251 LAGLAAMVAIARIKTAQAGMGLMYELDAIAAAVIGGVSLSGGRGRITGTVIGALILGVML 310

Query: 296 ELCCGM 301
                +
Sbjct: 311 SGFTFL 316


>gi|332160164|ref|YP_004296741.1| putative ABC transporter permease protein [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318607271|emb|CBY28769.1| autoinducer 2 (AI-2) ABC transport system,membrane channel protein
           LsrC [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325664394|gb|ADZ41038.1| putative ABC transporter permease protein [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330859757|emb|CBX70091.1| autoinducer 2 import system permease protein lsrC [Yersinia
           enterocolitica W22703]
          Length = 365

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 87/291 (29%), Gaps = 31/291 (10%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             + +    +     I ++ A G ++V+     + ++      + A +  +     G  +
Sbjct: 37  YFNLQTFTMIFSSAQILILLAIGATMVM-LTRNIDVSVGSITGLCAVTVGM-ALNAGFGL 94

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA--TLIMSEIFQNILIKWKPITNGKAGI 150
            L    + ++    G   G+     R   +     TL +      +L   K I    A  
Sbjct: 95  ALSCLFALLVGMGAGFFNGILVTWLRIPAIVATLGTLGLYRGLMLLLTGGKWIEGLPA-- 152

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                                  S        +  +   +  L  ++ L L +TA   ++
Sbjct: 153 --------------------DLKSLSTPILFSISPIGWLIMLLIVAMALLLGKTAFGRSF 192

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
               DN +    L       ++ AF+++     +AG  FA+    I        E   + 
Sbjct: 193 YATGDNLQGARQLGIRTDSIRIFAFSMNGVMAALAGIVFASQIGFIPNQTGSGLEMKAIA 252

Query: 271 SIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + V     +LGG  ++        +L  +  +   +    + +        
Sbjct: 253 ACVLGGISLLGGTGTIIGAILGAYLLTQIDSVLVLLRLPAWWNDFIAGLVL 303


>gi|229165608|ref|ZP_04293381.1| Ribose ABC transporter [Bacillus cereus AH621]
 gi|228617843|gb|EEK74895.1| Ribose ABC transporter [Bacillus cereus AH621]
          Length = 311

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 97/312 (31%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLVLIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        ++    +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMVV--GLLAGLAMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S      AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAAFAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|49480236|ref|YP_034925.1| ribose ABC transporter permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49331792|gb|AAT62438.1| ribose ABC transporter, permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 311

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 96/312 (30%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLALIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +     +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMAV--GLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGVVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|303248571|ref|ZP_07334827.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
 gi|302490012|gb|EFL49934.1| inner-membrane translocator [Desulfovibrio fructosovorans JJ]
          Length = 291

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/293 (12%), Positives = 81/293 (27%), Gaps = 14/293 (4%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
            + +Y+ S   Q   Y +   G +++  + G+++        +G    V           
Sbjct: 4   GAPQYLVSGLTQGAAYGLIGLGFTMIFNTTGIINFAQGEFVMLGGMLSVAFSGLGLPLPV 63

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
            ++      +    ++  L      G     A +I   +   +      +          
Sbjct: 64  AVLAACLATAVVGALMERLTIRPLAGAPAINAVIITIGVSILLRGGAMLVFG-------- 115

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                   ++ +        +     +    +VL     L A++ L+   T    A    
Sbjct: 116 ----KDTVSLPAFSGVKPILALGAAIQPQSLWVLAVTLALLAALKLYFSATIQGKAMLAC 171

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
              +KA   +  ++    L +F +S      AGA  A                +   +  
Sbjct: 172 ACQKKAASLVGISVARMALLSFGISGLIGAAAGAILAPITMTA--YDVGMMLGLKGFAAC 229

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           ILGG+ +    A    +L  +     G     +     F     +       +
Sbjct: 230 ILGGLGNPFGAAAGGLVLGVLEAFGAGYVSSGYKDAFAFIILLLLLFVKPSGL 282


>gi|284991093|ref|YP_003409647.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160]
 gi|284064338|gb|ADB75276.1| inner-membrane translocator [Geodermatophilus obscurus DSM 43160]
          Length = 338

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/314 (12%), Positives = 86/314 (27%), Gaps = 28/314 (8%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
            L  + V+  + +     +  S   ++++  Q     + A G+++++   GLL L+    
Sbjct: 34  YLLPILVLLTVAVGAARPSFWSGGNLENVLFQASFVGLAACGMTLLIA-GGLLDLSVAGV 92

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            A+ + +           +       A++       +          YL IA  I +   
Sbjct: 93  IAVSSIAVA-------TVLPYTTIGVAVLVALVVGAVLGALNGLLVTYLRIAPFIATLGT 145

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +      I                   + S         +     I     LL     
Sbjct: 146 LYLFQGGAFIWTSGN-----------VVPITSYFYRSMTTGTIGRLPISFLVFLLVAGLT 194

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              +     R+      R    N++A       +   K+  F V+     +AG F A   
Sbjct: 195 YLLL----NRSYFGRTLRAFGSNERAATLAGMPVNRTKVLVFVVAGVLFALAGVFMAGRL 250

Query: 254 DRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                 M +  E  ++ ++V+      GG  ++        +   +      +    +  
Sbjct: 251 ASAEGTMAQGFELDVIAAVVVGGTALRGGRGTVFGTIVGALLFAVLANALNLLGIASYWQ 310

Query: 309 LLKFDCSFNMRHTT 322
            +            
Sbjct: 311 YVVTGVVLVTAIAV 324


>gi|119873014|ref|YP_931021.1| inner-membrane translocator [Pyrobaculum islandicum DSM 4184]
 gi|119674422|gb|ABL88678.1| inner-membrane translocator [Pyrobaculum islandicum DSM 4184]
          Length = 291

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 93/306 (30%), Gaps = 19/306 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            +  +  I   IY +   GLS++ G L + ++       IGAY      + +        
Sbjct: 5   PFFITGVIIGSIYGLTTLGLSLIFGVLRVANVAHGSFIMIGAYMAFFAFTLWKWPPLATA 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++  +  A G ++ L ++K       +  L+        + +   +  G   +    RL
Sbjct: 65  VLAMAVGMALGYLVYLVAIKPLKKAGELHMLVALFALGIAVAEVARLLWGPDFVGYTWRL 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                           P   +  E+      +    ++ ++    R+T    A R +   
Sbjct: 125 G-------------SIPLFGLEVEVSKLLGAILALAIAVALEFLFRKTFFGRAVRAVVQE 171

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 +   +      + A+      + G                    +I   I ++G
Sbjct: 172 PLGAQLVGVKVENVYAFSAALGIGITTLGGVLLTLFIPVGINPYMGGPYTLIGFVIAVMG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+     A  I   +  +       Y+   L      +        + L L++L R 
Sbjct: 232 GLGSIMGAYVAGLIFGVIESV------GYYLFSLAGFAEPSQMALFTAFVVLLLLLLFRP 285

Query: 337 HSLLRL 342
             L RL
Sbjct: 286 TGLFRL 291


>gi|157370205|ref|YP_001478194.1| monosaccharide-transporting ATPase [Serratia proteamaculans 568]
 gi|157321969|gb|ABV41066.1| Monosaccharide-transporting ATPase [Serratia proteamaculans 568]
          Length = 342

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 98/328 (29%), Gaps = 25/328 (7%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFL-----GATKSQKYIDSMGIQILIYVMFAWGLSIV 59
           S ++ K   I  ++  +  +   L           +   +  + +Q+ I  + A G++ V
Sbjct: 21  SGKMPKDTGIFIVMIGIALVFEILGWYIRDQSFLMNPNRLLLIVLQVAIIGIIAVGVTQV 80

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           + + G + L+     A+ A     L                 IS     ++ LP+    G
Sbjct: 81  IITTG-IDLSSGSLIALTAVVAASLAQTSDS-----------ISPMYPALLDLPAAIPIG 128

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
             + +  +        I     P      G+ V+ R      T  + + F     + +  
Sbjct: 129 AGIGVGIICGFINGFLITRTGIPPFIATLGMMVSARGLAQYYTQGNPVSFLSDGFTSIGQ 188

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
                 + L +        + L+ T        I  N  +       +    ++ + ++ 
Sbjct: 189 GAMPVIIFLVIA---VIFHIALKHTRYGKYIYAIGGNMTSARVSGINVNKYLVTVYTIAG 245

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGV 294
              G+AG   AA        M    E   + + VI     +GG+  ++       IL  +
Sbjct: 246 GLAGLAGVVLAARVSSGQSSMGMSYELDAIAAAVIGGSSLMGGVGRITGTLIGAVILGLI 305

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                 +    +   +          + 
Sbjct: 306 KSGFTFIGVDSYIQDIIKGVIIVAAVSI 333


>gi|239834763|ref|ZP_04683091.1| monosaccharide-transporting ATPase [Ochrobactrum intermedium LMG
           3301]
 gi|239822826|gb|EEQ94395.1| monosaccharide-transporting ATPase [Ochrobactrum intermedium LMG
           3301]
          Length = 343

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 48/321 (14%), Positives = 92/321 (28%), Gaps = 16/321 (4%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            + +    LL +V  L++            I  +    ++  +FA G+ +V+ S G+   
Sbjct: 27  RRPEIFTLLLIIVTCLVVIGANPDFLQMSNIVDILRASVVRGLFAMGVLVVLASGGI--- 83

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
             V   AI A+    L          +     +I  A G              L   +LI
Sbjct: 84  -DVSFTAIAAFVMYALTMLVTNWFPEMPMTITLILAALGGAAFGALNGLLVQKLQAPSLI 142

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           ++   Q ++  +     G A                            V+    +  V  
Sbjct: 143 VTIGTQYVIRSFLLTFVGTALFMNIPAAMDAFGKASLFTHHASNGVVSVLPATVLVLVAA 202

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +            RT +  A   +  N      L   +   ++  FA +    G+AG  
Sbjct: 203 ALVTWFIL-----ERTLMGRAIFAVGGNPGIAERLGINLFRVRIFVFAYAGLLAGIAGVV 257

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMN 302
             +S    +P        + +I+ V+LGG        S+        ++  V  +   + 
Sbjct: 258 HVSSNRLANPFDL-AGMELEIIAAVVLGGARITGGSGSVIGTLLGVLLITIVSNVLIFVG 316

Query: 303 FYYFNSLLKFDCSFNMRHTTL 323
                 L        +  T  
Sbjct: 317 IPSTLQLAIVGIFILLAGTIF 337


>gi|228937908|ref|ZP_04100535.1| Ribose ABC transporter [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228970789|ref|ZP_04131429.1| Ribose ABC transporter [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228977364|ref|ZP_04137759.1| Ribose ABC transporter [Bacillus thuringiensis Bt407]
 gi|228782341|gb|EEM30524.1| Ribose ABC transporter [Bacillus thuringiensis Bt407]
 gi|228788914|gb|EEM36853.1| Ribose ABC transporter [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228821699|gb|EEM67700.1| Ribose ABC transporter [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326938388|gb|AEA14284.1| ribose ABC transporter permease [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 311

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 98/312 (31%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +++ +   A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLVLIIVVITVLNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +     +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMAV--GLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|254428928|ref|ZP_05042635.1| amino acid or sugar ABC transport system, permease protein,
           putative [Alcanivorax sp. DG881]
 gi|196195097|gb|EDX90056.1| amino acid or sugar ABC transport system, permease protein,
           putative [Alcanivorax sp. DG881]
          Length = 334

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/196 (10%), Positives = 56/196 (28%), Gaps = 15/196 (7%)

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
             AG               + +   ++    +     +Y  +     ++ + +    RT 
Sbjct: 62  AAAGQMFPSLFGGEAGIFANRMVGPQWFGLELSSARDVYGFIAFWTLVAVAAMWAFTRTP 121

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +      +RDN      +       +   F  S +F G+AG   A + + I+P+      
Sbjct: 122 LGRMSNAVRDNPDRMAFIGYQPRNIRYLIFIASGSFGGLAGGMAAVNYEIITPESLGLIP 181

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           + + + +  +GG+           ++  +  +                          + 
Sbjct: 182 SGMALLMAAVGGLGVFYGPIVGAIVVTLINSMLSDY---------------TDASILYVG 226

Query: 326 IALFLVILMRSHSLLR 341
           +    +++     L  
Sbjct: 227 LIFLSIVMFAPRGLAG 242


>gi|17546967|ref|NP_520369.1| transmembrane ABC transporter protein [Ralstonia solanacearum
           GMI1000]
 gi|17429268|emb|CAD15955.1| probable transmembrane abc transporter protein [Ralstonia
           solanacearum GMI1000]
          Length = 289

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 94/305 (30%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +  +   GLS+ +G +  ++L        G Y  V+L +R G+     +P+
Sbjct: 8   LFDGLAYGCLLFLIGIGLSVTMGLMRFINLAHGAFAMAGGYVCVVLMNRLGMPFLATLPI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + + A G ++     +       +  ++ S     + +       G +   V      
Sbjct: 68  AFLATAAAGFVLERTLYRRLYRASPLDQVLFSIALVFMAMAGATYVWGPSQQPVELP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L    R   + +    +  +++  +  L+A +   + RT      R   DNQ+
Sbjct: 125 -----DALRGQLRVFDTGLEVGRYRLFLVGVVVVLTALLAWLIERTRFGARVRASVDNQQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +       FA+ S                     F     +  + +V +GG 
Sbjct: 180 AAAGLGINVGLVFSVTFALGSGL--AGLGGGLGIDVLGLDPAFPIKYMVYFLLVVAVGGA 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  +L                               ++   + L++ +    
Sbjct: 238 GSIKGTLLAALVLGVFDVAGKYY--------------VPEVGAFVIYGLMVLLLALFPGG 283

Query: 339 LLRLR 343
           LL  R
Sbjct: 284 LLGRR 288


>gi|84687012|ref|ZP_01014895.1| branched-chain amino acid ABC transporter, permease protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84664986|gb|EAQ11467.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 281

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/298 (11%), Positives = 86/298 (28%), Gaps = 25/298 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                IY + A G  ++  +   ++        +GA+  +  G+   + +   + +   +
Sbjct: 1   MANGCIYGLVALGFVLIYKASEGVNFAQGDMMMLGAFVALGFGNSDQMGLPFGVAMILAM 60

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G+  G+  +  R          +    Q  L+                   +    
Sbjct: 61  VVMFGVGYGVERVVVRR---------IFGQPQFALVILTIAMGFVFRFVAGSIWGYSPLV 111

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           + +           ++  +     +     L+ ++  +   T I  A +    NQ A + 
Sbjct: 112 LETPFAGRNLYPGGIVVGLADLVTIGVTIALTLALWAFFAFTKIGLAAQAASQNQMAAYI 171

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   ++      + +S     +AG  +A        D       I   +  ++GG+ SL 
Sbjct: 172 VGVPVMRVNSLIWGLSGVVATVAGVLYATKGAI---DPNIGLLGIKAFAAAVIGGLGSLP 228

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                  I+  V  +           +                I + +V++ R   L 
Sbjct: 229 GALLGGLIIGVVEPIAGRYAPGELAKMSP-------------YIIMLVVLVTRPGGLF 273


>gi|119718334|ref|YP_925299.1| inner-membrane translocator [Nocardioides sp. JS614]
 gi|119538995|gb|ABL83612.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Nocardioides sp. JS614]
          Length = 287

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 49/301 (16%), Positives = 92/301 (30%), Gaps = 30/301 (9%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           +Q  +Y +   GL+I  G   +L+        IGAYS             +   V    +
Sbjct: 13  MQAGLYTLVGLGLTITFGVTHILNFAHGEFVTIGAYS------------LIGFVVLLPTA 60

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
            A  + + +        YL      + +  Q + +    +   +         +      
Sbjct: 61  LAIPLAVAVAVGVSAVIYLLGFVFTIGDHLQGLAVSLGLLLFSENLFLQM---FSAIPRT 117

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
              I                  V+L    +     + L+RT +  A R   D + A  +L
Sbjct: 118 GPRIEGTLGLPGDNQIAWARIVVILLTATIVVVAAIALKRTWVGLALRATGDERFAASTL 177

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
             +     L AF V+ A   +AG   A+            S  +    + I+GG+ S   
Sbjct: 178 GLSARRVGLYAFLVAGALAAIAGICIASVTPV--TPTIGMSYLLTGFVVAIIGGLGSPMG 235

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
           +  A+ +L  V             S+  F              A+ +V+L+    +   +
Sbjct: 236 VLVASLLLGLVEAFTARYADPSMTSVYTFT-------------AMIVVLLLMPQGIFNRK 282

Query: 344 T 344
            
Sbjct: 283 Q 283


>gi|325962482|ref|YP_004240388.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468569|gb|ADX72254.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 327

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 86/297 (28%), Gaps = 29/297 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             +Y   +  + V     + L      S   + ++  Q     + A G++ V+     + 
Sbjct: 26  WRRYVIYIGFVVVFIFFAILLRDQGFLSPNNLLNIFRQTATITVIAVGMTYVIACA-EID 84

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+      + +    +  S++GL   +L  ++  +                         
Sbjct: 85  LSVGSVAGLSSVCTAMALSQFGLVPGILAGLAVGLVVGS--------------------- 123

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I   +   + I    +T G  GI V    +   +  + ++               +  ++
Sbjct: 124 INGALVSLLGIPSFLVTLGMLGIAVGVAQWITASAPQPILNDTFNMLFGSGNFGPVPGLV 183

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +      A   + L RT           N+ A           K     +S+    +AG 
Sbjct: 184 VWSAIFVAIGAVVLNRTRFGRQVLATGGNRNAADFTGINTKRIKFQVLLISAMAASVAGM 243

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGG------MTSLSKIAKATAILIGVVELC 298
            +A          +   + +  I+ VILGG        S+        ++  +    
Sbjct: 244 LYAGRLQS-GRFQWGSGDELSAIAAVILGGTSLFGGFGSIIGTLFGALLIGLINNGL 299


>gi|323488292|ref|ZP_08093541.1| monosaccharide-transporting ATPase [Planococcus donghaensis MPA1U2]
 gi|323398044|gb|EGA90841.1| monosaccharide-transporting ATPase [Planococcus donghaensis MPA1U2]
          Length = 337

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/318 (12%), Positives = 102/318 (32%), Gaps = 22/318 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +N +  ++ ++A++    L   +    +   I ++   I I  + A GL++ +   G   
Sbjct: 25  INNWGTVIAIIALIVFFAL--AVPQFMTSSNIINIMRSISIVTIIAIGLTVSLTVNG-FD 81

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+      +     V     Y L   + I ++ +++    +      +K +   L  ATL
Sbjct: 82  LSIGSTATLANSLVVSFFVWYSLPTGVSIALALLLALGVALFNAFLIVKIKIPDLF-ATL 140

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I + + + +    +   G+                        +         Y++
Sbjct: 141 ATMFIIEGVAMTYTGGGSISVGMPR-----------LDGTPTTGTIPAVFSLLSQTPYII 189

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + M  + AS+  +L+ T        I  N +A       +   +  A+ +S+    + G 
Sbjct: 190 ILMLIVVASVYFFLKHTKHGRYLYMIGGNIEASRLSGIPVNRYRTLAYIISALLAALGGV 249

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILG------GMTSLSKIAKATAILIGVVELCCGM 301
             A+       +       +  ++   +G      G  +         ++  +      M
Sbjct: 250 VLASQIGSAQINAGG-GYLMPAVAAAFIGSSFAGQGKPNAIGTLVGATLIGVLENGLVMM 308

Query: 302 NFYYFNSLLKFDCSFNMR 319
           +  Y++  +       + 
Sbjct: 309 SVPYYSLNIIKGAVLALA 326


>gi|172038069|ref|YP_001804570.1| putative branched-chain amino acid ABC transporter permease
           [Cyanothece sp. ATCC 51142]
 gi|171699523|gb|ACB52504.1| putative branched-chain amino acid ABC transporter permease protein
           [Cyanothece sp. ATCC 51142]
          Length = 382

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 1/142 (0%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
               +Y +FA GL++  G  GL++   V    +GAY+ V+L     +   L +   A+++
Sbjct: 21  TSAGVYGIFALGLNLQWGFTGLINFGVVGFMTLGAYTSVLLTLTG-VPFVLAVLAGAILA 79

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
              G+++GL +L+ R DYLAI T+ +SE+ + + +  + +T G  G+        +  T 
Sbjct: 80  AILGLLIGLSTLRLREDYLAIVTIGVSELVRLVALNEEWLTKGALGLRQYPLPLNIEATF 139

Query: 164 RSLIRFFRFPSSFVIYEIFMYY 185
              +      +   IY  +  Y
Sbjct: 140 PIKLSLIAILTILAIYAEWTLY 161



 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 68/177 (38%), Gaps = 3/177 (1%)

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
            SF  Y+  +  ++L +  L+   + +L  +      + IR++++   +L   ++  KL 
Sbjct: 209 LSFYTYKAGLMVLVLLILALTYGCLEFLVNSPWGRILKAIREDEEIPRALGKNVLLYKLQ 268

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
           +F +  A  G+AGAFFA     I PD F          IV+LGG  S +       I   
Sbjct: 269 SFMLGGAIAGIAGAFFAWQLTTIYPDKFDPLITFNTWIIVVLGGSGSNAGTILGAIIFWA 328

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
              L   +        +            ++ + L ++++ R   +L  +       
Sbjct: 329 YDSLTRFLLPQLG---ILSPSQAGYFRIMIIGLILMILMVWRPQGILGKKEELTLGR 382


>gi|170703317|ref|ZP_02894108.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria
           IOP40-10]
 gi|170131771|gb|EDT00308.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria
           IOP40-10]
          Length = 339

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 97/320 (30%), Gaps = 28/320 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+ Y  +   LA +  L   L         +  ++  QI   V+ + G++ V+   G + 
Sbjct: 32  LSNYLGLAGALAAMIALFSLLSSHFLTYDTF-STIANQIPDLVVMSVGMTFVLIIAG-ID 89

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+ A    +   ++         +   ++ A G + G  ++ +R       +L
Sbjct: 90  LSVGSVLALAASMVSVAALKWQWGPLPAALIGIAVATATGSLTGAITVGWRIPSFI-VSL 148

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            + E  + +  +         G                      F        + +    
Sbjct: 149 GVLEAARGVAYQLTNSRTAYIGD--------------------AFDFLSNPIALGISPAF 188

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    +  +    L RT        I  N++A           K+  FA+  A  G+A  
Sbjct: 189 LIAVAVMIAAQFVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKILVFALMGALAGLASL 248

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
           F  +  +   P+     E  ++ ++VI     +GG  S+        I+  +      + 
Sbjct: 249 FQISRLEAADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIG 308

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
                  +       +    
Sbjct: 309 ANEPTKRIITGAVIVVAVVL 328


>gi|313679774|ref|YP_004057513.1| inner-membrane translocator [Oceanithermus profundus DSM 14977]
 gi|313152489|gb|ADR36340.1| inner-membrane translocator [Oceanithermus profundus DSM 14977]
          Length = 387

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/350 (11%), Positives = 86/350 (24%), Gaps = 58/350 (16%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI-- 96
             +      +Y + A G ++V G + L++      + +G+Y      +   +   L +  
Sbjct: 44  FLNALTLGSLYALIALGYTMVYGIIRLINFAHGEIFMLGSYFAFYAMTLTPMHWGLALLI 103

Query: 97  ------------------------------------------PVSAMISGACGMIMGLPS 114
                                                      +  + +    M+    +
Sbjct: 104 TVLLGGTVLLVLRSLFNLEEPKRTAALALLIFAGTFFLLAFRNMGWIEALLLSMLATGVA 163

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
                                I            G  +             L R   F  
Sbjct: 164 GVLLEAVAYRPLRGAPRESMLITAIAASFFLQNMGQLLFGPRVQGFNAETILNRPLNFTI 223

Query: 175 SFVIYEIFMYYVLLGMCFLSASII--LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
                      +++         +  L++ RT +  A R    + +    +   +     
Sbjct: 224 GEETVYYTGILIVVPTVTAVLLFVLNLFVSRTKLGKAMRATAQDAEVAQMMGVNVNQVIA 283

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
             F + S     AG  +A    +I P M      I   +  ++GG+ SL        +L 
Sbjct: 284 LTFFIGSILAAAAGVMYAIRFGQIHPLM-GLIPGIKAFTAAVIGGIGSLPGAVLGGLLLG 342

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +      +             + +        + L L++L R   L+  
Sbjct: 343 FIEIYVVSLFP-----------TLSAYKDVFAFVLLILILLFRPSGLVGE 381


>gi|310772427|dbj|BAJ23983.1| benzamide amidohydrolase [uncultured bacterium]
          Length = 306

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 93/305 (30%), Gaps = 16/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++  + + GL+++ G +  ++L     Y IGA+      +  G  ++ L+  
Sbjct: 10  LLNGLQLGVLLFLLSSGLTLIFGIMNFINLAHGSLYMIGAFVGAASYNASGSFLFSLLAA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A  +    ++  L +     +      L    +          I               
Sbjct: 70  VAAAAIVGLVMEHLVARPLYRNDHLYQVLATFGLMMFFNELAIVIWG-----------NR 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +           Y I+   ++     ++      ++RT      R    +  
Sbjct: 119 PYFVTIPEVIRGSVEILGAPYPIYRLLIIAVGVVVAFGAWFLIQRTRFGMLVRAGTTHAS 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +   K S F + +A  G+AG                    I+ + ++++GG+
Sbjct: 179 MVSVLGANVDLLKKSLFMLGAALAGLAGTLAGPILSV--QSGMGDPVLILALVVIVVGGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT---LMVIALFLVILMR 335
            S+     A  ++  +  L            L    +  +       L+ + +  V+  +
Sbjct: 237 GSIRGALFAAILIAVIDTLGRAYLPSLLTLFLAPTAANTVGSAVASMLIYLLMAFVLAFK 296

Query: 336 SHSLL 340
            H L+
Sbjct: 297 PHGLM 301


>gi|254252401|ref|ZP_04945719.1| Ribose/xylose/arabinose/galactoside ABC-type transport systems
           permease component [Burkholderia dolosa AUO158]
 gi|124895010|gb|EAY68890.1| Ribose/xylose/arabinose/galactoside ABC-type transport systems
           permease component [Burkholderia dolosa AUO158]
          Length = 339

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 90/313 (28%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    V    L         +     ++  QI   V+ + G++ V+   G + L+     
Sbjct: 38  LAGALVAMIALFSALSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAG-IDLSVGSVL 96

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +   ++         +   ++   G + G  ++ +R       +L + E  +
Sbjct: 97  ALAASMVSVAALKWQWGPLPAALIGIAVATVTGSLTGAVTVGWRIPSFI-VSLGVLEAAR 155

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  +         G                      F        + +    L    + 
Sbjct: 156 GLAYQLTNSRTAYIGDA--------------------FDILSNPIALGISPAFLIAVAVM 195

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    L RT        I  N++A           K+  FA+  A  G+A  F  +  +
Sbjct: 196 IAAQFVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKILVFALMGALAGLASLFQISRLE 255

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +      +        
Sbjct: 256 AADPNAGAGLELQVIAAVVIGGTSLMGGRGSVVSTFFGVLIISVLAAGLAQIGANEPTKR 315

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 316 IITGAVIVVAVVL 328


>gi|328542352|ref|YP_004302461.1| branched-chain amino acid ABC transporter permease [polymorphum
           gilvum SL003B-26A1]
 gi|326412099|gb|ADZ69162.1| Branched-chain amino acid ABC transporter, permease protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 304

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 79/305 (25%), Gaps = 14/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A G++++ G + L++       A   ++ +         ++     
Sbjct: 8   LFDALSLGSLYALGALGIALIFGVMRLVNFAHGDVIAFSLFALLWPSVDAVAIVFAGQLP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      +    S+                           +      +  + R   
Sbjct: 68  WFLLIPFMLAVGAGLSVLSELVVFRRFRRANPATMMIASFALGFVIRYFLLMLFSSRP-- 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             + +                 +     +     +  ++  +LRRT      R   +N  
Sbjct: 126 -KSILLLPGLAQPIELFGARIPLLQVITIAVTIAILLTLTAFLRRTRFGLEMRAAAENFT 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L        + AFA+S A          +        M   +  ++     ++GG+
Sbjct: 185 MARMLGVRANRVIMGAFALSGALAAAIALILGSQTGTADIQMGG-AVMLMAFIATVIGGL 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL     A  +L                                +  A+ LV++ R   
Sbjct: 244 GSLPGAVLAGFLLGAASVTMQ----------FALPVEARPFRDAFVYGAVILVLIWRPQG 293

Query: 339 LLRLR 343
           LL  R
Sbjct: 294 LLSAR 298


>gi|86739058|ref|YP_479458.1| inner-membrane translocator [Frankia sp. CcI3]
 gi|86565920|gb|ABD09729.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Frankia sp. CcI3]
          Length = 310

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/316 (11%), Positives = 87/316 (27%), Gaps = 40/316 (12%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG---------------SR 87
                +Y + A G ++V G L L++      + +G++  +                  S 
Sbjct: 15  LTVGSLYAVIALGYTLVYGVLQLINFAHSEVFMLGSFGGLFAARALLPGDGSVPGGLESV 74

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             +++ L          A  +         R     +A LI +       +       G+
Sbjct: 75  GLVTMGLGAGAICGGLAAFTLERVAYRPLRRRSAPRLAYLISAIGASLFAVNLAGKEFGR 134

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
             + + D                 F             +      +   +   +  T + 
Sbjct: 135 QNVALPDLFTDGTV----------FTLFGADVSTQSLVIFAVAIAILVGLDRLVAGTRLG 184

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
              R +  +      +   +    +  F +     G  G  +A + +        F   +
Sbjct: 185 QGIRAVAQDADTAVLMGVNVERIIIVTFVLGGLLAGAGGFLYAMTFNA--SYSMGFVPGV 242

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              +  +LGG+ ++        +L  V      +    +  ++ F             + 
Sbjct: 243 KAFTAAVLGGIGNVRGAMLGGLLLGLVESYGGYIFQASYKDVIAF-------------LV 289

Query: 328 LFLVILMRSHSLLRLR 343
           L  ++++R   LL  R
Sbjct: 290 LVGILMIRPSGLLGER 305


>gi|27381075|ref|NP_772604.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354241|dbj|BAC51229.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 297

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 101/304 (33%), Gaps = 22/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A    ++  +  +++        +GA+    L ++Y +  W+ +P+
Sbjct: 10  LVNGLVVGTLYGVVAMSFVLIYKATQVVNFAQGELLLVGAWVCWALLAKYQVPFWIGMPM 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +     G+ + +  L+       I+ ++++     +L        G            
Sbjct: 70  TLVFMFVFGIAIQVLILRPMIGEPIISVIMVTIGLSTVLQATLKWMFGVNPQP------- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +          +  +      L+    +   +  + R +    A R    NQ+
Sbjct: 123 ----FPRVFESQSVSLFGLQIQTVYVMSLVVSVAMMIGMAWFFRASKYGLAMRATAFNQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  ++      A+A+S+    +AG   A      S         I V    ILGG+
Sbjct: 179 VAQSLGISVKSVFAMAWAISATVSAVAGVVVAVVNGVSSGLAAY---GIKVFPAAILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +  +   ++  Y +            +       L +V++++ + 
Sbjct: 236 DSVGGAVLGGIIIGLLENVAQYVDSEYLHW--------GNLYEIAPFYVLIIVLMIKPYG 287

Query: 339 LLRL 342
           L   
Sbjct: 288 LFGT 291


>gi|271499019|ref|YP_003332044.1| inner-membrane translocator [Dickeya dadantii Ech586]
 gi|270342574|gb|ACZ75339.1| inner-membrane translocator [Dickeya dadantii Ech586]
          Length = 355

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 84/312 (26%), Gaps = 10/312 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      L +    +   +  M   + I  + A G+++V+   G + L+      
Sbjct: 17  FIALLIVIAFFSLMVPNFLTPSNLLIMTQHVAITGLLAIGMTLVI-LTGGIDLSVGAVAG 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I                     +  +      +++ +  +        + T ++   F  
Sbjct: 76  ICGMVAG--ALLTNGIPLWGGNILFLNVPEVILVVSVLGMLIGLVNGVVITRLVVAPFIC 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L                D   +        +    F        + ++  +  M     
Sbjct: 134 TLGMMYVARGAAL--LFNDGSTYANLNGMPELGNTGFAFLGSGTLLGIFLPIWLMLAFLL 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +   R+T +      I  N+ A       I+  K+  +A S     + G   A+    
Sbjct: 192 LGLYLTRKTPLGRYIYAIGGNESAARLAGVPIVNVKIFVYAFSGLCAALVGLVVASQLQT 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + V     + GG   +S       +++ + +    M    F  ++
Sbjct: 252 AHPMTGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFLADGMVMMGVSDFWQMV 311

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 312 IKGLVIVTAVVI 323


>gi|227876671|ref|ZP_03994780.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mobiluncus mulieris ATCC 35243]
 gi|269976199|ref|ZP_06183195.1| inner-membrane translocator [Mobiluncus mulieris 28-1]
 gi|306817620|ref|ZP_07451363.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mobiluncus mulieris ATCC 35239]
 gi|227842568|gb|EEJ52768.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mobiluncus mulieris ATCC 35243]
 gi|269935528|gb|EEZ92066.1| inner-membrane translocator [Mobiluncus mulieris 28-1]
 gi|304649662|gb|EFM46944.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mobiluncus mulieris ATCC 35239]
          Length = 362

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/314 (12%), Positives = 98/314 (31%), Gaps = 13/314 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+  +  L L+ +   LL+    G   +   +  +   +++  +FA G  +V+   G + 
Sbjct: 34  LHANEFYLFLVLLGVSLLIQARSGQFFTINNLLDLANAMIVPGLFAIGAHMVL-VSGGID 92

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++     ++  Y+              L+ +  +++    +             LA  TL
Sbjct: 93  VSFPALGSLAVYAVARFMVDIDFRGPFLVVLLIIMAVGALLG---AFNGLFTSQLAAPTL 149

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I++    N+         G   I               L        +  I      + +
Sbjct: 150 IITLGTMNVFAGIMQGALGAVQISRLPEPIDKFGRAVLLRVENVHQGTQSILPATFIFFV 209

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +      I   ++ T    A   +  +++A   +   + + K   + +      +AG 
Sbjct: 210 IVL----VLIGFVMKYTMFGRALYAMGGDEQAAIRVGFRVKWIKFWLYVIVGVIAAIAGL 265

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
              +   +++P      E +++ ++V     I GG  SL  +   T ++  +        
Sbjct: 266 MSVSVTHQMNPTDLLGMEMMVIAAVVLGGTAITGGKGSLLGVVMGTMLIAIIQTNMIMAG 325

Query: 303 FYYFNSLLKFDCSF 316
                         
Sbjct: 326 IPTTGKRFVLGLMI 339


>gi|75909217|ref|YP_323513.1| inner-membrane translocator [Anabaena variabilis ATCC 29413]
 gi|75702942|gb|ABA22618.1| neutral amino acid ABC transporter membrane protein [Anabaena
           variabilis ATCC 29413]
          Length = 288

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 85/288 (29%), Gaps = 13/288 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      I  + A GL++  G L L +        +GAY  +++ +        +I  
Sbjct: 9   IVNGIAVGSIIALAAVGLTLTYGILRLSNFAHGDFLTLGAYLTLLVNTFGVNIWLSMIVA 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                GA  +   L   + R       TLI+  I   + ++                ++ 
Sbjct: 69  VVGTVGAMLLSEKLLWSRMRSIRANSTTLIIISIGLALFLR-----------NGIILIWG 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L          V        VL        ++   L+ T I  A R + D+  
Sbjct: 118 GRNQNYNLPITPALDIFGVKVPQNQLLVLALAVLSIGALHYLLQNTKIGKAMRAVADDLD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   +       + ++     + G+ +             +   + + + VILGG+
Sbjct: 178 LAKVSGIDVEQVIFWTWLIAGTVTSLGGSMYG--LITAVRPNMGWFLILPLFASVILGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            +      A  I+  V E+   +    +   +       +       +
Sbjct: 236 GNPYGAIAAAFIIGIVQEVSTPLLGSQYKQGVALLIMILVLLIRPKGL 283


>gi|107022681|ref|YP_621008.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054]
 gi|116689630|ref|YP_835253.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
 gi|170732933|ref|YP_001764880.1| monosaccharide-transporting ATPase [Burkholderia cenocepacia MC0-3]
 gi|254245489|ref|ZP_04938810.1| L-arabinose ABC transporter, permease protein [Burkholderia
           cenocepacia PC184]
 gi|105892870|gb|ABF76035.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia cenocepacia AU 1054]
 gi|116647719|gb|ABK08360.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia cenocepacia HI2424]
 gi|124870265|gb|EAY61981.1| L-arabinose ABC transporter, permease protein [Burkholderia
           cenocepacia PC184]
 gi|169816175|gb|ACA90758.1| Monosaccharide-transporting ATPase [Burkholderia cenocepacia MC0-3]
          Length = 339

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 97/320 (30%), Gaps = 28/320 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+ Y  +   LA +  L   L         +  ++  QI   V+ + G++ V+   G + 
Sbjct: 32  LSNYLGLAGALAAMIALFSVLSSHFLTYDTF-STIANQIPDLVVMSVGMTFVLIIAG-ID 89

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+ A    +   ++         +   ++ A G + G  ++ +R       +L
Sbjct: 90  LSVGSVLALAASMVSVAALKWQWGPLPAALIGIAVATATGALTGAVTVGWRIPSFI-VSL 148

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            + E  + +  +         G                      F        + +    
Sbjct: 149 GVLEAARGLAYQLTNSRTAYIGD--------------------AFDFLSNPIALGISPAF 188

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    +  +    L RT        I  N++A           K+  FA+  A  G+A  
Sbjct: 189 LIAVAVMIAAQFVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKILVFALMGALAGLASL 248

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
           F  +  +   P+     E  ++ ++VI     +GG  S+        I+  +      + 
Sbjct: 249 FQISRLEAADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIG 308

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
                  +       +    
Sbjct: 309 ANEPTKRIITGAVIVVAVVL 328


>gi|163793938|ref|ZP_02187912.1| probable high-affinity branched-chain amino acid transport permease
           protein [alpha proteobacterium BAL199]
 gi|159181049|gb|EDP65566.1| probable high-affinity branched-chain amino acid transport permease
           protein [alpha proteobacterium BAL199]
          Length = 299

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 48/299 (16%), Positives = 103/299 (34%), Gaps = 15/299 (5%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L  L+         +        I+ + A+GL++V G + + +L       +G Y     
Sbjct: 5   LSLLWQAPIIGVDLLLQGLFIGAIFALVAYGLALVWGVMNVKNLAQGDMVILGGYI-AYQ 63

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            + +GL   + +P + ++    G  + +  ++   D     +L+ +     ++ +   + 
Sbjct: 64  ATLWGLHPIVALPAAIVLMFGLGWGIYVLIIRRVVDRDMFTSLLATFGLSLLIQQVLNLI 123

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G                V           SF+I +    Y LL    L+A+II++++R+
Sbjct: 124 YGP------------EVKVAESGFGSMEIGSFIIIQNVRLYSLLLAGVLAAAIIVFMKRS 171

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            +  A R    + +A   L           +A++++  G AG   A     +    +   
Sbjct: 172 RMGQAIRATAQDARAARVLGVNTDHVYAFTYALNASICGAAGVLVAM--IWVIQPYYGIV 229

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            +I    IV   G+ +L  +  A   L     +   +    F           +    L
Sbjct: 230 YSIRAFIIVTAAGLGNLPGVIIAGFGLGMWENVSGFVFGAEFAVAAVVLMLVFVLMYRL 288


>gi|331696386|ref|YP_004332625.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326951075|gb|AEA24772.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 303

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 97/309 (31%), Gaps = 26/309 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +Y + A  ++++  ++  ++       A  A+ +  +G+  GL     + V
Sbjct: 20  IVNGLMTGSVYALLALSIALIFKTMDTVNFATASMGAFCAFLFFQVGTVLGLGWGAGLAV 79

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A  +   G  +    ++  G       ++ +     +L     I  G     +   L  
Sbjct: 80  AAAGAVVLGWAVERGIVRPLGSGDLFRLVLATMGLDIVLNNATQIFFGSGVQNINAPLPS 139

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             V  ++    +L      +  + L LR T +    R    + +
Sbjct: 140 G-----------GLNVGGVNVDLARLVILGVAVAGAVVLALVLRYTNLGVGMRAYAQDPQ 188

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +           + +SS    +A    A+    +    F     I   +  +LGG+
Sbjct: 189 AATLMGVPARTVSRWTWIISSLLGLIAAIMVASV--SVLSVGFLQGTFISAFTAAVLGGL 246

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +SL        +L  +  L            L              V+ + +V+++R   
Sbjct: 247 SSLPGAVAGGFVLGVLEALSIAYAPRAVTIALP-------------VLIILVVLMIRPAG 293

Query: 339 LLRLRTPSN 347
           L    + + 
Sbjct: 294 LFGRLSATR 302


>gi|308186615|ref|YP_003930746.1| ABC transport system permease protein [Pantoea vagans C9-1]
 gi|308057125|gb|ADO09297.1| putative ABC transport system permease protein [Pantoea vagans
           C9-1]
          Length = 355

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 85/312 (27%), Gaps = 10/312 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      + +    +   +  M   + I  + A G+++V+   G + L+      
Sbjct: 17  FIALLIVVGFFSVMVPNFLTPSNLLIMTQHVAITGLLAIGMTLVI-LTGGIDLSVGAVAG 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I       L +              +      + +    +      +     +   I   
Sbjct: 76  ICGMVAGALLTSGIPLWGGNTLFLNVPEVILVVAIFGVLVGLINGTVITRLGVAPFICTL 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            ++         A +   D   +        +    F        + +Y  +  M     
Sbjct: 136 GMMYVAR----GAALLFNDGGTYANLVGMPALGNTGFALLGSGTVLGVYLPIWLMLGFLL 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +   R+T +      I  N+ A       II  K+  +A S    G+ G   A+    
Sbjct: 192 LGLYLTRKTPLGRYIYAIGGNESAARLAGVPIIKVKIFVYAFSGLCAGLVGLVVASQLQT 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + V     + GG   +S       +++ + +    M    F  ++
Sbjct: 252 AHPMTGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFLADGMVMMGVSDFWQMV 311

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 312 IKGLVIVTAVVI 323


>gi|238752819|ref|ZP_04614286.1| Autoinducer 2 import system permease protein lsrC [Yersinia rohdei
           ATCC 43380]
 gi|238708964|gb|EEQ01215.1| Autoinducer 2 import system permease protein lsrC [Yersinia rohdei
           ATCC 43380]
          Length = 336

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/296 (12%), Positives = 88/296 (29%), Gaps = 31/296 (10%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      S +    +     I ++ A G ++V+     + ++      + A +  +    
Sbjct: 1   MIDSNYFSMQTFTMIFSSAQILILLAIGATMVM-LTRNIDVSVGSITGLCAVTVGM-ALN 58

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA--TLIMSEIFQNILIKWKPITN 145
            G  + L    + ++    G   G+     R   +     TL +      +L   K I  
Sbjct: 59  AGFGLALSCLFALLVGMMTGFFNGILVTWLRIPAIVATLGTLGLYRGLMLLLTGGKWIEG 118

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
             A                         S        +  +   +  L  ++ L L +T+
Sbjct: 119 LPA----------------------DLKSLSTPILFSISPIGWLIMLLIVAMALLLGKTS 156

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
              ++    DN +    L       ++ AF+++     +AG  FA+    I        E
Sbjct: 157 FGRSFYATGDNLQGARQLGIRTDSIRIFAFSMNGVMAALAGIVFASQIGFIPNQTGSGLE 216

Query: 266 NIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
              + + V     +LGG  ++        +L  +  +   +    + +        
Sbjct: 217 MKAIAACVLGGISLLGGTGTIIGAILGAYLLTQIDSVLVLLRLPAWWNDFIAGLVL 272


>gi|254703275|ref|ZP_05165103.1| hypothetical protein Bsuib36_04981 [Brucella suis bv. 3 str. 686]
 gi|256029196|ref|ZP_05442810.1| hypothetical protein BpinM2_00760 [Brucella pinnipedialis
           M292/94/1]
          Length = 246

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 103/272 (37%), Gaps = 29/272 (10%)

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                   +G+S  L + +  + + A G+++G  +++ +G Y  + TL ++++F    ++
Sbjct: 1   MTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIRRQGIYSTMITLALAQMFFFFCLQ 60

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                                  ++ + R F F    +   + MYY +L +  L    I 
Sbjct: 61  ASFTHG--------------EDGLQGVPRGFLFGFIDLNQPMNMYYFVLAVFVLGVFAIW 106

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  +      +++R+N+    SL  ++   KL+AF +S+   G+AG   A      +  
Sbjct: 107 RITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAGGMKALVFQFATLT 166

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
              +  +  VI + +LGG+ +L       A ++ +       +F                
Sbjct: 167 DVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALQNWLATSDFPV-------------- 212

Query: 320 HTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
            T +  +     +L+    ++     S   ++
Sbjct: 213 -TIVTGLIFMACVLLFRKGIIGEFYASRIGKK 243


>gi|291296060|ref|YP_003507458.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
 gi|290471019|gb|ADD28438.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
          Length = 302

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 61/281 (21%), Positives = 107/281 (38%), Gaps = 37/281 (13%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G LSL     + +GAY+  +     G      + V  +++GA  + +GL +L+  G Y 
Sbjct: 49  TGQLSLAHGAFFGLGAYAAALAAPALGTLP--ALLVGGVVAGASSLFLGLATLRLHGMYF 106

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           AIATL  SE+ + +++K                           I     P+    + + 
Sbjct: 107 AIATLAFSEVMRTLVLKAPFTGGA--------------------IGLPVQPAFGGAFPLG 146

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            YY+ +G+  L+A I L L R+ +  A    R  +     L   ++  KL AF +S+   
Sbjct: 147 GYYLAVGVLALAAGISLLLSRSRLHYAMAATRQGEAVARVLGVPVVRVKLLAFMISAFLA 206

Query: 243 GMAGAFFAASRDRIS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
           G+AG  +A     +S  D F     +  + I I GG+ + +       I++ +       
Sbjct: 207 GLAGGVYAMKTLFLSPYDAFGLGRAVEALVIPIFGGLYTTTGPLLGGLIIVSLETWLR-- 264

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                             +  +  + L L IL     L+ L
Sbjct: 265 ------------LRIGEGYLVVYGVILVLTILFLPRGLVSL 293


>gi|111021854|ref|YP_704826.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
 gi|110821384|gb|ABG96668.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
          Length = 285

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 81/300 (27%), Gaps = 28/300 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                +Y + A G +IV  S    +        +G +          L I ++   +   
Sbjct: 8   LALGAVYTLVAIGYNIVFISSHTFNFAQAQLMMVGTFVAYTGLVTLKLPILVVAVTATAT 67

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 I  + +++   D+               L     I      I+ ++ L      
Sbjct: 68  VTILAGIEEIVAVRPVRDH--------QNQLVTTLGAATLINGATQLIWGSEPLTVPFFG 119

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               I      +  V   + +  ++L +            RT    A   I ++++A   
Sbjct: 120 SNDPITALGGRTYPVEIVLLILAIVLVVVLGRVG-----TRTMTGLALLGISEDREAALL 174

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
               +    L AFA S A  G  G F       +       +  I     + +GG  SL 
Sbjct: 175 RGVNVRALALGAFAFSGALAGFLGLFVGPKTFAV--ATLGSALAIKGFVALAIGGFGSLP 232

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   +  V                      +      + + L  ++++R   L   
Sbjct: 233 GALVGGLTVGLVESFAA-------------LELGSQYSNIAVFVVLIAILMVRPAGLFGR 279


>gi|301062181|ref|ZP_07202863.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
 gi|300443693|gb|EFK07776.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
          Length = 294

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 97/303 (32%), Gaps = 23/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   IY + A G  ++    G+L+L       IGAY         G+   L + +
Sbjct: 8   LTTGIMVGGIYALVALGWVLIYKCSGVLNLAMGELTLIGAYVTY-SFYEMGMPFILAVFL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G +     L        +A ++++      L        G            
Sbjct: 67  TLLVGIVLGFLTERIFLDRLIGEPILAVIMVTVGLSFFLKGLIGYLWGSDTRVFEP---- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S+          +       +  +    L    + + + T    + +   D++ 
Sbjct: 123 ------SVFDIKPISVGILKISPVYLWSFILAIVLLIVFVCFFKYTRWGLSMQATADDET 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL  +  F   +A+A++    G+ GA           ++      ++V+  V+LGG+
Sbjct: 177 AALSLGVSARFVYSAAWAIAFMSAGVGGALLGNIN---GINISVGYLGLLVLPAVVLGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  +          YF   +            +  + + + +L + + 
Sbjct: 234 NSVPGAIVGGILIGLLQNFSGTYLDQYFPGGV---------KEIVPFVFMAVFLLFKPYG 284

Query: 339 LLR 341
           L  
Sbjct: 285 LWG 287


>gi|197294993|ref|YP_002153534.1| putative transport system protein [Burkholderia cenocepacia J2315]
 gi|195944472|emb|CAR57074.1| putative transport system component [Burkholderia cenocepacia
           J2315]
          Length = 286

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 105/304 (34%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++Y + A GLSIV G L  ++      Y +GAY       ++  + W+ + +
Sbjct: 8   IVNGIGVGMLYFLLAVGLSIVFGLLRFVNFAHGAFYLLGAYLCY-QALQWSANFWVALAI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ GA    +    L+          ++ +     +L +   +  G  G  V      
Sbjct: 67  VPLVVGAFAWGVEKLVLRHVYAQQHEFHILATVGLALVLQECAILAWGPLGDNVPPPDAL 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  +              +Y  +  +V+     L+A +   L  T + +  R   ++ +
Sbjct: 127 NGVVI----------WGGFVYPKYRLFVIGFTAVLAALLWWVLDGTRLGSTVRAGSESTE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       FA+ +A   +AG   A  R              I   +V++GGM
Sbjct: 177 MVSLLGINVTRVFSLVFALGAATAALAGVLAAPIRGV--DPFMGIEALGIAFVVVVVGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +         ++  V  L   +              +      ++ +A+  V+L+R + 
Sbjct: 235 GNFLGALVGGLLVGIVQSLMSTL--------------WPEGARLMIYVAMAAVLLLRPNG 280

Query: 339 LLRL 342
           LL  
Sbjct: 281 LLGR 284


>gi|171318761|ref|ZP_02907901.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MEX-5]
 gi|171096034|gb|EDT40963.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MEX-5]
          Length = 350

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 78/263 (29%), Gaps = 25/263 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V  + + +   +  S   ++++  Q  I  + A G++ V+   G + L+     A
Sbjct: 40  LVGLIVVCIAMMIASPSFLSAANLENVLRQASINAIIAVGMTCVI-LTGGIDLSVGSVMA 98

Query: 76  I-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           + G  +  ++ +       L I ++          + +         + +AT+ ++    
Sbjct: 99  LSGTLAAGLMVAGVNAVAALAIGIAVGFGFGFLNGVFVAFAGMPPIIVTLATMGIARGLA 158

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I     PI                                     + +   +L M  + 
Sbjct: 159 LIYTGGYPIDGLPD----------------------WVAFFGSGKVLGIQAPVLIMLVVY 196

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A   L L R         I  N++A       +   KL  + +      +A         
Sbjct: 197 AIAWLLLDRMPFGRYVYAIGGNEQATRLTGVRVARVKLIVYTLGGLTSALAAIVLTGRLM 256

Query: 255 RISPDMFKFSENIIVISIVILGG 277
                       +  I+ V++GG
Sbjct: 257 S-GQPNAGVGFELDAIAAVVMGG 278


>gi|148271599|ref|YP_001221160.1| putative sugar ABC transporter membrane spanning protein
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
 gi|147829529|emb|CAN00442.1| putative sugar ABC transporter, membrane spanning protein
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
          Length = 352

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 45/336 (13%), Positives = 103/336 (30%), Gaps = 29/336 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLF-LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
           LRL+    +  L+ ++  L    +  G       + ++ I     ++ A GL+ V+   G
Sbjct: 31  LRLDSLPTVAALVILLAMLAYGEIAYGRILQAATLSNLLINNAHVIVLAVGLTFVI-LTG 89

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+     A+ + + VIL +       +++ +  + + +  +   L            
Sbjct: 90  GIDLSVGAIVAVSSVAGVILANAGWDPWVVMVLMILIGTASGVVSGVLI----------- 138

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
                 + F   L          + +          + +RSL    +      + ++   
Sbjct: 139 -QFFDVQPFIATLAMMFLGRGLASILSTVPERLDDESPLRSLATNMKVVDGPKVNDVVTT 197

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +L    + A     L RT +         ++++   +   +   KL+ + +S    G+
Sbjct: 198 PGVLIALVVVAVAFFVLHRTRLGRTVYATGGSEQSAALMGLPVRRTKLAVYVISGTLAGL 257

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS-----LSKIAKATAILIGVVELCC 299
           A   + A             E   + + VI G + +     +        +L  +  L  
Sbjct: 258 ASVIYTARLGSAQNITGIGWELDAIAATVIGGTLLTGGVGFVLGSVVGALVLGLMNVLIT 317

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
                                     I L  V+L R
Sbjct: 318 R----------DGGIPPEATTIITGGILLVFVLLQR 343


>gi|84501716|ref|ZP_00999888.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
 gi|84390337|gb|EAQ02896.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
          Length = 291

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 89/299 (29%), Gaps = 25/299 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                IY + A G  ++  +   ++        +GA+  +  G+   + +   + V   +
Sbjct: 11  LANGCIYGLVALGFVMIYKASEGVNFAQGDMMMLGAFIALGFGNTDQMGLPFGVAVLLAM 70

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G+  G+  +  R          +    Q  L+                   +    
Sbjct: 71  VLMFGIGWGVERVVVRQ---------IFGQPQFALVILTIALGFVFRFVAGSIWGYTPLV 121

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           + +        S  ++  +     +     L+ ++  +   T I  A +    NQ A + 
Sbjct: 122 LETPFAGQNLRSGGIVISLADLVTIGVTLVLTLALWAFFAFTRIGLAAQAASQNQMAAYI 181

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   ++      + +S A   +AG  +A      + D       I   +  ++GG+ SL 
Sbjct: 182 VGVPVMRVNSLIWGLSGAVATVAGVLYATR---GAIDPNIGLLGIKAFAAAVIGGLGSLP 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  I+  V  +           +                I + +V++ R   L  
Sbjct: 239 GALLGGLIIGVVEPVAGRYAPGELAKMSP-------------YIIMLIVLVTRPGGLFS 284


>gi|330837751|ref|YP_004412392.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Spirochaeta coccoides DSM 17374]
 gi|329749654|gb|AEC03010.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Spirochaeta coccoides DSM 17374]
          Length = 325

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 47/311 (15%), Positives = 101/311 (32%), Gaps = 25/311 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  V   ++  +   A  S   + ++ +Q  I  + A G+S+V+ S G++ L+   + A+
Sbjct: 26  LSFVFLFVVAIVVSPAFLSWSNLTNLFVQGAIVGICAMGMSLVI-SAGMIDLSTGSSVAL 84

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
            +    ++      S+ + +    +     G I GL   K       +    MS      
Sbjct: 85  LS-GLGVVVLNSSGSLLVALLFCLVGGLLVGTINGLLVTKGGIAPFIVTLATMSAW---- 139

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                          V ++L   G    S   +  F +      + + ++++ +  +S  
Sbjct: 140 -------------RSVINQLGQGGPFTVSPAMYQGFRNVAAGRILGIPHLMIFLIIISVI 186

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
             L + +T        +  NQ+A      ++   K   F  +    G+A    A+    I
Sbjct: 187 TALLMSKTKFGRYVYAVGSNQQAARLSGISVDRVKALIFMYAGTLYGLAAFLLASRLTSI 246

Query: 257 SPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                     +  I+ V +GG         +        +L  +  +    N   F + L
Sbjct: 247 QAASAGSGYEMDAIAAVAIGGTSMDGGKGKIIGTFLGILMLRIIHTVLIMANVPPFLNGL 306

Query: 311 KFDCSFNMRHT 321
                  +   
Sbjct: 307 VQGIIIIVAVL 317


>gi|310816373|ref|YP_003964337.1| inner-membrane translocator [Ketogulonicigenium vulgare Y25]
 gi|308755108|gb|ADO43037.1| inner-membrane translocator [Ketogulonicigenium vulgare Y25]
          Length = 291

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 80/303 (26%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +    Y + A GL++  G   +++L         A+   +L + YG+S  + + +
Sbjct: 6   LISGLVLGGTYALVAMGLTLQYGISRIMNLAYGEFVIFAAFCAFVLFTAYGISPLVGMLL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +   G ++    ++           +  +           +            + F
Sbjct: 66  VLPAAFVVGYVLYGVMMQPLVKRSGKTGALDVDAILATFGLMFVVQG-------VMLVTF 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                      F                 +    +  ++ + L RT    A R +    +
Sbjct: 119 GANYTSYSYMNFGVNILGASIAANRLLAFVLAVVIGGALYMVLARTRWGTAIRAVAVAPE 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +      AFA+        G   +  +             +  + IVI+GG 
Sbjct: 179 AAPLVGINVNHMARLAFALGMVLAAAGGIMISMYQTF--NASMGVVFAMKALIIVIMGGQ 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L     A  +L  V                                    V+L R   
Sbjct: 237 GNLLGALVAGLMLGLVETFVATYIDPGLTLAAT-------------YAIFLAVLLWRPSG 283

Query: 339 LLR 341
           L  
Sbjct: 284 LFG 286


>gi|121600296|ref|YP_994567.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia mallei SAVP1]
 gi|167001639|ref|ZP_02267433.1| ABC transporter, permease protein [Burkholderia mallei PRL-20]
 gi|121229106|gb|ABM51624.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia mallei SAVP1]
 gi|243062650|gb|EES44836.1| ABC transporter, permease protein [Burkholderia mallei PRL-20]
          Length = 349

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 59/327 (18%), Positives = 115/327 (35%), Gaps = 23/327 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+A +  L     +    +  Y        L   + A G++++   LGL+ L+     
Sbjct: 25  LALVATLGTLAAIALVVPAVADAYWIKTLTSALTISIAAAGVALLYRQLGLVCLSQHALL 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +G +   +  +  G    L +   A    A GMI GLP+L+ RG YLA+ TL+M+  FQ
Sbjct: 85  GVGGWI-ALRLAHLGAPFELCVLAGAAGGSAIGMIAGLPALRLRGLYLALVTLMMAGGFQ 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++        G                +    R           +   +  +     L+
Sbjct: 144 VVVSAIGFPDGGGG----------FTGHLSFGARQMMARPLVGQSDAAYFRYVAAWAALA 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++I   RR+    +W  IR  +    +    ++  +  AF ++    G++G   A S  
Sbjct: 194 FALIELHRRSKAGRSWALIRRGEMLALAAGVNVVLYQTWAFGLAGLLAGLSGGLLAGSVG 253

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           ++    F  SE++++ ++ ++GG+           +L  V  L                 
Sbjct: 254 QLDGRAFAASESVLLFALSVVGGVYHWFGALITGLLLRAVPALLTDFG------------ 301

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLR 341
                       AL   ++     +  
Sbjct: 302 VNGYLAMIFFGAALLHALVTAPAGIAG 328


>gi|288937854|ref|YP_003441913.1| inner-membrane translocator [Klebsiella variicola At-22]
 gi|288892563|gb|ADC60881.1| inner-membrane translocator [Klebsiella variicola At-22]
          Length = 335

 Score = 56.0 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 93/320 (29%), Gaps = 23/320 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L   + +L L+ ++    +     +  S   +  M     I ++ A G  +V+     + 
Sbjct: 7   LKHREALLALVIILMIGAIGSRAPSFVSPGNLVEMFNDTAILIILALGQMMVL-LTKGID 65

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+      +L + Y     + +   A + G    ++    +   G    + TL
Sbjct: 66  LSMAANLALTGMIVALLNAHYPGIPVVALLALATLLGLLMGMINGLLVWRLGIPAIVVTL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I++ I+                      G  V S      F S      + +  + 
Sbjct: 126 GTMSIYRGIIFLLTD-----------------GGWVNSHQMSADFLSLPRSTLLGLPLLS 168

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                    +  +LR +    A  T   N  A +         +  +F +S A  G  G 
Sbjct: 169 WCAIAALLLVGYFLRYSRTGRALYTAGGNATAAYYTGINAGKMQFVSFCLSGALAGFCGY 228

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
            + +       D+    E  ++ + VI     +GG   +         L  +      + 
Sbjct: 229 LWISRFAVAYVDVANGFELQVIAACVIGGISTMGGSGRVLGCLCGALFLGVINNALPVIG 288

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F  +        M    
Sbjct: 289 ISPFWQMAISGAVIVMAVLL 308


>gi|228906417|ref|ZP_04070300.1| Ribose ABC transporter [Bacillus thuringiensis IBL 200]
 gi|228853233|gb|EEM98007.1| Ribose ABC transporter [Bacillus thuringiensis IBL 200]
          Length = 311

 Score = 56.0 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 98/312 (31%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +++ +   A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLVLIIVVITVLNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +     +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMAV--GLLAGLVMGIINGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|213418271|ref|ZP_03351337.1| ribose ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 292

 Score = 56.0 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/305 (9%), Positives = 86/305 (28%), Gaps = 23/305 (7%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
             ++        +   + ++  Q  +  + A G+++V+ + G + L+     A+      
Sbjct: 1   IAIVSTLSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLALTGAVAA 59

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
            +      ++  +    A+ +    +   + +                     +L+    
Sbjct: 60  SIVGVEVNALVAVAAALALGAAIGAVTGVIVAKGRVQ--------AFIATLVMMLLLRGV 111

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
                 G         + T        F +        +     ++ + F++A  +L   
Sbjct: 112 TMVYTDG-------SPVNTGFTDNADLFGWFGIGRPLGVPTPVWIMAIVFIAAWYMLHHT 164

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R  +      +  N+ A      ++   K+  +++      +AG    A      P    
Sbjct: 165 R--LGRYIYALGGNEAATRLSGISVSKVKIIVYSLCGLTASLAGIIEVARLSSAQPTAGT 222

Query: 263 FSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
             E   + ++V     + GG   +        IL  +      +    +  ++       
Sbjct: 223 GYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVIL 282

Query: 318 MRHTT 322
           +    
Sbjct: 283 LAVLV 287


>gi|218296528|ref|ZP_03497256.1| inner-membrane translocator [Thermus aquaticus Y51MC23]
 gi|218243070|gb|EED09602.1| inner-membrane translocator [Thermus aquaticus Y51MC23]
          Length = 297

 Score = 56.0 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 91/306 (29%), Gaps = 20/306 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +  LIY + A G  ++  +  +++       AIGA++         L   L  P+
Sbjct: 8   LVSGIVLGLIYALVALGFVLIYKASRVVNFAQGELLAIGAFAAHFFLVTLKLPFLLAFPL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   +   G  +    LK       I+ ++ +      L           G+        
Sbjct: 68  ALGFTAVVGYTLERVFLKRLVGQPIISVIMATIGLAFFL----------DGVLHLTPYGA 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S +                   L     L  +   + +R+ +  A R++ D+Q 
Sbjct: 118 GSYGYPSFLPEGGVTLLGARISYAQLLALGLTLALILAFGWFFQRSTLGVAMRSVADDQM 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL  ++      A+A +       G             +        V  +VILGG+
Sbjct: 178 AAMSLGVSVAKVFALAWAAAGLTAAAGGVMVGTISGLNLDSLVHIGLR--VFPVVILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++  +  L  G                         + L LV+  + H 
Sbjct: 236 DSIPGAVVAGILIGVLENLAAGFLDPLVPG--------GGTREVFPFLVLLLVLWFKPHG 287

Query: 339 LLRLRT 344
           L     
Sbjct: 288 LFGTEE 293


>gi|322832400|ref|YP_004212427.1| inner-membrane translocator [Rahnella sp. Y9602]
 gi|321167601|gb|ADW73300.1| inner-membrane translocator [Rahnella sp. Y9602]
          Length = 329

 Score = 56.0 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 79/280 (28%), Gaps = 20/280 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             +   +  +     I  + A GL  VV   G + ++     +IG Y        +G S 
Sbjct: 35  FMTLGNLTDVATSYAILGILACGL-FVVLIAGGIDISFPAVTSIGQYVMASYIIHHGGSF 93

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            L   +S       G++ G      R      A +I              +TNG      
Sbjct: 94  PLAFAMSMGTGLLLGLVNGFLVYWLRV----PAIIITIATLNLFYGLLVYLTNGTWLYGF 149

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
            D                      +     +  ++             + RT +      
Sbjct: 150 PDWFMNGINWFSFTAADGYDYGLTLPLLSLLGVIIATGV--------LMNRTRVGRQIYA 201

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +  N+ A   L   I+      +       G+A    A     ++P+       + V++ 
Sbjct: 202 MGSNRDAASRLGLNILRLHFYVYGFMGLLAGIAAVVQAQITQSVAPNSL-LGYELTVLAA 260

Query: 273 VIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           V+L      GG  SL+       +L  +      ++   +
Sbjct: 261 VVLGGTSMTGGRGSLTGTILGVMLLAFLQNGLTLLSISSY 300


>gi|218459348|ref|ZP_03499439.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           Kim 5]
          Length = 279

 Score = 56.0 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 68/214 (31%), Gaps = 19/214 (8%)

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            LI     Q  ++    +   +            G       ++  F ++  +Y +   +
Sbjct: 30  WLITRLNLQPFVVTLCGLLIYRGAARFYTADGTAGFAFGQNFQYLEFLTAGRLYGVPNTF 89

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + L +  +   ++L   R+        I  N++A            +SA+ +      +A
Sbjct: 90  IALVIISVVMWVVL--HRSVFGRYLYAIGKNEEAARYSGIRTDRMVMSAYVICGLLTALA 147

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCC 299
             +FA     ISP        +  I+  +LGG        S+  +   T +L  +  L  
Sbjct: 148 AIYFAMYTRSISPASHGQFYELYAIAAAVLGGFSLRGGEGSIIGVVLGTVLLQELQNLVN 207

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
            +               ++    +  + L  V++
Sbjct: 208 LL-----------GIPSSLNFAVMGGVILIGVLI 230


>gi|295402505|ref|ZP_06812456.1| inner-membrane translocator [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294975452|gb|EFG51079.1| inner-membrane translocator [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 293

 Score = 56.0 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 73/288 (25%), Gaps = 14/288 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      IY + A G  I     G+L+L+      +GA   +   +     I  ++  
Sbjct: 11  LFSGLTVGSIYALVALGFVITYSITGILNLSQGDFAMLGALICISFVNSGFPFIIAILLS 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++    G+         R    A   +I              +               
Sbjct: 71  IVLVMIIGGLFERSAIRPARYSSTATLIIITIGAAFVFRGIAIFVWG------------T 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +R             + +    + +       A +  +  +T +  A      N  
Sbjct: 119 QPYALRPFTGNDSLQIFGAVIQTQNIWAIGISLVSLAVLYFFFNKTYMGKAVTACVVNPF 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +          A  +S+    +AG   A      +         +      ++GG+
Sbjct: 179 AARLMGIQPRKMSFGAIVISAGLGALAGIIIAP--ISGASYDMGVMIGLKAFIAAVIGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           T+         I+  +     G     +   + F     +       I
Sbjct: 237 TNAPAAIAGAFIIGILEAFTEGYFSSGYKDAISFGLLLLVLFFMPNGI 284


>gi|256059157|ref|ZP_05449366.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella neotomae 5K33]
 gi|261323110|ref|ZP_05962307.1| inner-membrane translocator [Brucella neotomae 5K33]
 gi|261299090|gb|EEY02587.1| inner-membrane translocator [Brucella neotomae 5K33]
          Length = 281

 Score = 56.0 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 97/266 (36%), Gaps = 13/266 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
              +    ++   +          ++  +I+   +    L +V G  G+ +L     +  
Sbjct: 16  AGLIGIVAIIAASVVGWFLFPDNLALLTRIIAIALLVLSLDLVTGYCGIATLGHAALFGA 75

Query: 77  GAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           GAY   I  + +      L+  +  +     G++ G   L+  G    + ++ +  +F  
Sbjct: 76  GAYGAGIAAAHFGVTDPILMTVIGLLAGAVTGLVSGAVILRATGLAQLVLSIAVVHLFHE 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
              K    T G  G+         G               F +Y   +Y   + +  +S 
Sbjct: 136 AANKASGWTGGSDGLSGISPDPIFGI------------FEFDLYGRTVYIYAVILLLISF 183

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             + ++ R+      R ++++     ++  ++  A+L  + +S A  G+ GA  A S   
Sbjct: 184 IFLRYVVRSLFGMLCRGVKEDPIRIHAMGASVQGAQLRMYVISGAVAGIGGALNAISTQI 243

Query: 256 ISPDMFKFSENIIVISIVILGGMTSL 281
           +  D   F+ +   + +++LGG  S 
Sbjct: 244 VGLDSLSFTMSAEALVMLVLGGRISF 269


>gi|196249321|ref|ZP_03148019.1| inner-membrane translocator [Geobacillus sp. G11MC16]
 gi|196211078|gb|EDY05839.1| inner-membrane translocator [Geobacillus sp. G11MC16]
          Length = 293

 Score = 56.0 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 83/288 (28%), Gaps = 14/288 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      IY + A G  I     G+L+L       +GA    I     G+   L I +
Sbjct: 11  LFSGLTIGSIYALVALGFVITYSVTGILNLAQGDFAMLGALIC-IALVNSGVPFVLAIGL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S M +   G +    +++          +I++     +      +  G     +      
Sbjct: 70  SMMAAMVIGGLFERLAIQPARHSSVAVLIIITIGASFVFRGIALLVWGTDPYALRPFAGG 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              ++              + +    + ++        + L+  RT    A      N  
Sbjct: 130 GSLSMFG-----------AVLQWQSVWAIVISLASFIGLHLFFHRTYFGKAVTACVINPF 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   I    L A AVS+    +AG   A      +         +      ++GG+
Sbjct: 179 AARLMGIDIRKMSLGAIAVSAGLGALAGIVIAP--ISGASYDMGIMIGLKAFIAAVVGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           T+         ++  +     G     +   + F     +       +
Sbjct: 237 TNAPAAIAGAFLVGLLESFAEGYLSSGYKDAVSFGLLLLVLFVMPNGL 284


>gi|27381063|ref|NP_772592.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354229|dbj|BAC51217.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 289

 Score = 56.0 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 100/306 (32%), Gaps = 26/306 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             +       ++  + A GL++ +G +  ++L        G Y  ++L +R G   +  +
Sbjct: 6   TNLFDGVAYGMLLFVLACGLAVTLGLMNFVNLAHGAFAMTGGYVCMVLVNRMGWPFFAAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++ + S A G+++     +       +  ++ +     + +       G +        
Sbjct: 66  PLAFVSSAAIGIVLERTLYRHLYTRSHLDQVLFTIGLTFMSVAAVDYIQGSS-------- 117

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                         +F    V    +   +++    L+ ++ + L +T   +  R   D+
Sbjct: 118 --RVFINLPAALQGQFDLFGVGIGRYRLMIIVICGLLTIALQMVLAKTRFGSRLRAAVDD 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   L   +       FA      G+ GA  A          F     I  + +V +G
Sbjct: 176 PRAASGLGINVPQVFAFTFAFGCGLAGLGGALSAEILGL--DPYFPLKFMIYFLIVVTVG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G +S++    A+ +L                               ++   + ++++ R 
Sbjct: 234 GSSSITGPFLASLLLGIGDVAGKYYVPKMGP--------------FVIYTMMIVILIWRP 279

Query: 337 HSLLRL 342
           + L   
Sbjct: 280 NGLFGR 285


>gi|167759813|ref|ZP_02431940.1| hypothetical protein CLOSCI_02176 [Clostridium scindens ATCC 35704]
 gi|167662432|gb|EDS06562.1| hypothetical protein CLOSCI_02176 [Clostridium scindens ATCC 35704]
          Length = 315

 Score = 56.0 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/317 (12%), Positives = 92/317 (29%), Gaps = 27/317 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y  IL ++  V   +L        S K   ++  Q  IY++ + G+++V+   G + L+ 
Sbjct: 10  YTVILVIVLAVLVGVLAAASPYFFSWKNCRNILNQSAIYLVLSVGMTLVI-CAGQIDLSV 68

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                    S  +L      +   ++   A+ +    +   + +      ++   + +  
Sbjct: 69  GAVIGFSGMSMGMLIKAGLPASAAILLGLAIAAFIGLVNGWIVAYGRINSFIVTLSTMTI 128

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                +++       G                         F          +   +L  
Sbjct: 129 IRGIILVLTNSKSVFG---------------------FGPEFGFIGSGKVGPVNMPILIS 167

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++    + L +T   N    I  N+ A       +   K+  F       G+AG    
Sbjct: 168 IMIAVIGAILLHKTRFGNYCLFIGSNEIALNRSGVNVRKYKVMVFTFCGLCAGIAGMIVT 227

Query: 251 ASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A  +   P   +  E   + + ++      GG  S+     A  IL  +      ++   
Sbjct: 228 ARLNSAEPLAGQGYEMDAIAATILGGTSMQGGKGSIIGTVIACFILNIMKNGLTLLSIST 287

Query: 306 FNSLLKFDCSFNMRHTT 322
               +       +    
Sbjct: 288 HYQEILTGLILLISVLI 304


>gi|163855103|ref|YP_001629401.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella petrii DSM 12804]
 gi|163258831|emb|CAP41130.1| branched-chain amino acid ABC transporter, permease protein
           [Bordetella petrii]
          Length = 290

 Score = 56.0 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 89/304 (29%), Gaps = 24/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      +Y + A G S++ G+  +  +     + +  + +  L +    +  L    
Sbjct: 7   FVNGIQTGALYALIAAGFSLIFGTTRVFHVAHGATFTLAGFVFYELYTVLAWAWPLAALG 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++   GM++          +      +    F   ++    IT G            
Sbjct: 67  AGVVAAVFGMLVDRYVYSVIQRHEGAFFTVFVASFGLAIVVQNLITIG---------FGR 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              TV + +         +         +L        +   L  T +  A R + +N  
Sbjct: 118 GLVTVPTPLSKSLELLPGLYVAPMAAVAVLCAVVAFGLLHWLLTHTNLGLALRALGENPD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                  T        F + S     A    AA+              +I I+  I+GG+
Sbjct: 178 LVRVYGMTPRRLSQYVFLIGSLLAVPAAILTAATSGL--NPSMGHHIMLISIAATIVGGV 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL   A A  +L     L        ++  + F             + LFL IL R   
Sbjct: 236 GSLRGAAVAGLLLGMAENLSLAWIDPQWSEAVTF-------------VVLFLFILFRPGG 282

Query: 339 LLRL 342
           +   
Sbjct: 283 VFGR 286


>gi|138896620|ref|YP_001127073.1| branched chain amino acid ABC transporter permease [Geobacillus
           thermodenitrificans NG80-2]
 gi|134268133|gb|ABO68328.1| Branched-chain amino acid ABC transporter (permease) [Geobacillus
           thermodenitrificans NG80-2]
          Length = 293

 Score = 56.0 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 84/288 (29%), Gaps = 14/288 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      IY + A G  I     G+L+L       +GA    I     G+   L I +
Sbjct: 11  LFSGLTIGSIYALVALGFVITYSVTGILNLAQGDFAMLGALIC-IALVNSGVPFVLAIGL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S M +   G +    +++          +I++     +      +  G     +      
Sbjct: 70  SMMAAMVIGGLFERLAIQPARHSSVAVLIIITIGASFVFRGIALLVWGTDPYALRPFAGG 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              ++   +  ++             + ++        + L+  RT    A      N  
Sbjct: 130 GSLSMFGAVIQWQ-----------SVWAIVISLASFIGLHLFFHRTYFGKAVTACVINPF 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   I    L A AVS+    +AG   A      +         +      ++GG+
Sbjct: 179 AARLMGIDIRKMSLGAIAVSAGLGALAGIVIAP--ISGASYDMGIMIGLKAFIAAVVGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           T+         ++  +     G     +   + F     +       +
Sbjct: 237 TNAPAAIAGAFLVGLLESFAEGYLSSGYKDAVSFGLLLLVLFVMPNGL 284


>gi|172060575|ref|YP_001808227.1| monosaccharide-transporting ATPase [Burkholderia ambifaria MC40-6]
 gi|171993092|gb|ACB64011.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MC40-6]
          Length = 339

 Score = 56.0 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 90/313 (28%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L         L         +     ++  QI   V+ + G++ V+   G + L+     
Sbjct: 38  LAGALAAMIALFSALSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAG-IDLSVGSVL 96

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +   ++         +   ++ A G + G  ++ +R       +L + E  +
Sbjct: 97  ALAASMVSVAALKWQWGPLPAALIGIAVATATGSLTGAITVGWRIPSFI-VSLGVLEAAR 155

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  +         G                      F        + +    L    + 
Sbjct: 156 GVAYQLTNSRTAYIGD--------------------AFDFLSNPIALGISPAFLIAVAVM 195

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    L RT        I  N++A           K+  FA+  A  G+A  F  +  +
Sbjct: 196 IAAQFVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKILVFALMGALAGLASLFQISRLE 255

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +      +        
Sbjct: 256 AADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGANEPTKR 315

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 316 IITGAVIVVAVVL 328


>gi|325109712|ref|YP_004270780.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Planctomyces brasiliensis DSM 5305]
 gi|324969980|gb|ADY60758.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Planctomyces brasiliensis DSM 5305]
          Length = 318

 Score = 56.0 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 85/295 (28%), Gaps = 26/295 (8%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
                 + S+  QI      A G+++V+  +G + L+     A+ +            S+
Sbjct: 34  FFQHSTLVSIANQIPDLTFLAVGMTLVL-VVGGIDLSVGSLLALSSAVLGYFMVDCEWSL 92

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           W  +P+  +    CG+  GL S+ FR     +   ++                   G   
Sbjct: 93  WAALPLCLLAGAVCGLFNGLISVGFRIPSFIVTLGMLEM---------------ARGATK 137

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                       ++  F    +  ++   F+      +            +T        
Sbjct: 138 VVTDSQTKYIGSAVESFGEPLAGIMLSPAFLLAFCTVLLGQVLL-----TQTVFGRYCVA 192

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A            ++ FA+S    G+AG    +      P+     E   + + 
Sbjct: 193 IGTNVEAVRMSGIKAAPYSIAVFAISGLMCGLAGLAQTSRLSSADPNAAIGIELSAIAAC 252

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI     +GG  ++        I+  +      +     N  +       +    
Sbjct: 253 VIGGTSLMGGRGNVISSFFGVLIIAVLQTGLAQLGVSDANKQIITGGVIVVAVIL 307


>gi|255099474|ref|ZP_05328451.1| ribose ABC transporter, permease protein [Clostridium difficile
           QCD-63q42]
          Length = 332

 Score = 56.0 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 95/280 (33%), Gaps = 26/280 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +      +  V+  +++ +      +   + ++G QI I  + A G++ V+   G + L+
Sbjct: 24  RDQGSAAVGLVIIFIIMSVASSNFLTLDNLINVGRQISINAILAVGMTFVI-ITGGIDLS 82

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+    +      Y   IW  + ++  I    G+I G      +           
Sbjct: 83  VGAVIALVGTFWATTVVNYNAPIWGGMILALAIGTILGVIKGAIISTQKLPPF------- 135

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 + +    I +G + ++   R           +    F      Y   +   ++ 
Sbjct: 136 -----IVTLAMLTIISGASFVFTGGRPI--------SVNTDAFKMLGRGYIGPIPIPVII 182

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           M  +  +    L+RT        +  N++A       +    +  +A++     +AG   
Sbjct: 183 MIIVVIAGHFLLKRTNFGRHVHAVGGNEEAARLCGVKVNKVIVKVYALAGLLTALAGIIL 242

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKI 284
           ++     SP +   +E   + ++V     ++GG  S+   
Sbjct: 243 SSRLASGSPTVGDGAELDAIAAVVLGGTNMMGGSGSIVGT 282


>gi|170741993|ref|YP_001770648.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168196267|gb|ACA18214.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 288

 Score = 56.0 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 82/303 (27%), Gaps = 28/303 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
                +  L+  + A  +++V G     +         GAY   +  +    S+ +    
Sbjct: 8   FIGGLMSGLVVGLSALAITLVFGIARFPNAATGDVMTAGAYI-ALSVAALTDSVIIGGLF 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+  GA  ++  L   +      ++  L+ S      L     +  G         L  
Sbjct: 67  GALTGGALAILAYLLVFRKLSGRSSVTNLLASIGIAFFLRAVIGVGFGHQQQVFQLPLER 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +    +        V         L+               T I    R + D+  
Sbjct: 127 PWRILDVRFQPADLNLVIVAVIALSVVFLILYA------------TPIGRCMRAVADDPG 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                  +     ++ + ++ +   +AG  +      +      +   +   +  ILGG+
Sbjct: 175 LAKVSGISPSRIMIALWVLAGSVSAVAGVMYG--IKTVVTPEMGWDMLLPAFAAAILGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +      A  +L  + E+   +  + +   + F     +                R   
Sbjct: 233 GNPVGAICAGILLGTLQEVATPLVGFTYKIAISFFVLLLVLLV-------------RPRG 279

Query: 339 LLR 341
           L  
Sbjct: 280 LFG 282


>gi|114763400|ref|ZP_01442807.1| putative permease abc transporter protein [Pelagibaca bermudensis
           HTCC2601]
 gi|114543938|gb|EAU46949.1| putative permease abc transporter protein [Roseovarius sp.
           HTCC2601]
          Length = 327

 Score = 56.0 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 90/295 (30%), Gaps = 23/295 (7%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
             A  +   + ++       ++ A G  IV+     + L+     A+      +L     
Sbjct: 28  FPAFVAPSNLIAVFNDTSPLMLLALGQMIVI-LTKCIDLSVAANLALTGMCVAMLNIMMP 86

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
                +I V A+  G    ++    +        + TL    IF+ I+            
Sbjct: 87  GLPVAVIIVIAVALGTLMGMINGLLVWKLDIPPIVVTLGTMTIFRGIIF----------- 135

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                 L   G  V +      F +      + +  +      +  +  + + RT++  A
Sbjct: 136 ------LISNGKWVNAHEMSPAFKAFPRAELLGLPMMSWVAILVILAFFVLMTRTSLGRA 189

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              +  N  A       +   K +A+ +S A  G+ G  + +       D+    E   V
Sbjct: 190 VYAVGGNPHAAVYTGIDVGRTKFTAYTISGALAGLTGYLWVSRYAVAYVDIAGGFELDTV 249

Query: 270 ISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            + V     I GG+ S+         L  +      +N   F  L     +  + 
Sbjct: 250 AAAVIGGVSIAGGVGSVFGAVLGALFLGVIKNALPVVNISPFWQLAISGSAIIVA 304


>gi|160881403|ref|YP_001560371.1| monosaccharide-transporting ATPase [Clostridium phytofermentans
           ISDg]
 gi|160430069|gb|ABX43632.1| Monosaccharide-transporting ATPase [Clostridium phytofermentans
           ISDg]
          Length = 334

 Score = 56.0 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 25/319 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF++R       + +  ++  ++  +      S K I ++  QI   ++   G S V+ 
Sbjct: 12  KIFAVRGMGQVITVTIGLIILCIVFSIVNPIFYSGKNIANLLRQIAPILIIGIGQSYVL- 70

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G + L+      +       + ++  ++ W  + ++ +   A G++ G    K +   
Sbjct: 71  ITGNIDLSIGSVVGMSCMISATMMTKG-VNPWAAVLITFICCLAVGILNGELVSKCKLPP 129

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                  M+       I       G  G        F                      +
Sbjct: 130 FIATLGTMTIARGVAQIVNNNYNTGSIGESAQGFRNFFYYGKT----------------V 173

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +Y  +     +       L +T        I  N  A       +    + A+ VS+  
Sbjct: 174 GLYNAIWITIVMWVVFNFLLSKTRTGRHIYAIGSNVDAARLSGVNVHSTTIKAYLVSAVC 233

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS------LSKIAKATAILIGVV 295
               G     +   +       S  +  ++  ++GG+++      L       +I   + 
Sbjct: 234 ACTVG-LMTCATTGMGTMDAGNSYEMYAVAASVIGGVSTLGGQGLLLGTVVGASIWGVLQ 292

Query: 296 ELCCGMNFYYFNSLLKFDC 314
                         +    
Sbjct: 293 NGLQFAGAPVAIRNITIGI 311


>gi|331019449|gb|EGH99505.1| sugar ABC transporter, permease protein [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 341

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 47/319 (14%), Positives = 95/319 (29%), Gaps = 26/319 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + L+ +   L+  LF    + Q ++ +      M +Q+ I  + A G++ V+ + G + L
Sbjct: 27  IFLVLIGIGLIFELFGWIVRDQSFLLNSQRLVLMILQVSIIGLLAIGVTQVIITTG-IDL 85

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+ A     L              S         +  LP        L +  L 
Sbjct: 86  SSGSVLALSAMIAASLAQ-----------TSDFSRAVFPSLTDLPVWIPIVVGLGVGLLA 134

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
            +     I I   P      G+ V+ R      T    +       + +        + L
Sbjct: 135 GAINGSIIAITGIPPFIATLGMMVSARGLARFYTEGQPVSMLSDSYTAIGQGAMPVIIFL 194

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +        + LR T        I  N +A  +    +    +  ++++    G+AG  
Sbjct: 195 VVA---VIFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLIIVYSIAGLLAGLAGVV 251

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            +A        M    E   + + VI      GG+  ++       IL  +      +  
Sbjct: 252 ASARAATGQAGMGMSYELDAIAAAVIGGTSLAGGVGRITGTVIGALILGVMASGFTFVGV 311

Query: 304 YYFNSLLKFDCSFNMRHTT 322
             +   +            
Sbjct: 312 DAYVQDIIKGLIIVAAVVI 330


>gi|295680880|ref|YP_003609454.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295440775|gb|ADG19943.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 286

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 54/302 (17%), Positives = 105/302 (34%), Gaps = 26/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       ++  + A GL+I +G +  ++L       +G Y+ V+  SR  +     +P+
Sbjct: 5   LFDGIAYGMLLFVLASGLAITLGLMNFVNLAHGAFAMVGGYATVLAMSRLSIPFLCALPI 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + S   G I+     K       +  ++ +     + I       G    ++    + 
Sbjct: 65  AFVASAVLGGILERTLYKRVYGQSELNQVLFTIGLTFMAIATVDYFMGSTQQFLTLPQWL 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G TV           + +    +  +V+L    L  ++ L L RT   +  R   D+ +
Sbjct: 125 QGRTV----------FAGIGIGYYRLFVILVCMVLVIALQLILTRTRFGSRLRASVDDPR 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   I F  L+ FA  S   G+ GA  A         +F     I  + +V +GG 
Sbjct: 175 AASGLGININFVFLTTFAFGSGLAGLGGALGANMLGL--DPIFPLKFMIYFLVVVAVGGT 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TSL+    A+ +L                               ++   + + ++ R   
Sbjct: 233 TSLTGPLLASLLLGIADVAGKYY--------------IPDLGAFIIYGVMIITLMWRPQG 278

Query: 339 LL 340
           L 
Sbjct: 279 LF 280


>gi|291302113|ref|YP_003513391.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728]
 gi|290571333|gb|ADD44298.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728]
          Length = 337

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/330 (12%), Positives = 98/330 (29%), Gaps = 28/330 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + V+  ++         S   I     +  +    A G ++V+     L L+     
Sbjct: 19  LAGVLVLGGVITAANGHNLFSTGNIVDTFGRSSLLGFIAIGQTLVI-LCRSLDLSVGYVM 77

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ +     L      ++ + +  +  ++G  G   GL   K + +      +    +  
Sbjct: 78  ALSSLVVAELMDGDAANMPMAVAATLGLAGLIGAANGLVITKLKVNAF----IATLGVGL 133

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I      +  G AG        F  T +                   +    L M   +
Sbjct: 134 IIKGFLDTVYAGPAGKVSDSFESFGYTRIGP-----------------LPLSTLLMLVTA 176

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A+ + +L R+   +    +  +++             ++A  + +   G+AG   A+   
Sbjct: 177 AAGVWFLARSRTGHHIYAVGGDREVARLSGVRTDRTVITAHVLCAMAAGVAGLLIASRFG 236

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
             S  ++    ++  I+ V+L      GG   ++       IL     +   +    F  
Sbjct: 237 TGSALVYDDGFDLESIAAVVLGGTALMGGRGGIAGTVAGVLILAVADTVFNLLRVDPFVK 296

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +       +         L +  +     
Sbjct: 297 DVLRGVIIIVAVAIYAGRRLGVTRVRFPSG 326


>gi|192292914|ref|YP_001993519.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|192286663|gb|ACF03044.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 290

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 87/308 (28%), Gaps = 27/308 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ S      +Y + A G ++V  +  +++        +G    V   +         +
Sbjct: 6   QFLISGLTVGAVYALVALGFTLVYHASDVVNFAQGEFVMLGGMVTVFAYAAGVPLPLAAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +      ++  L     RG       +I       +    + +             
Sbjct: 66  LAVIVAVVVGLLLYWLAIAPARGASAVSLIIITIGASILLRGAAQIV------------F 113

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + +            + +    +VL G   +  ++   + RT I  A      N
Sbjct: 114 DKQFHKLPAFSGDAPIHLLGAVIQPQSLWVLGGAALVVLTLYYVMERTLIGKAVVATAAN 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +      AF  S+A   +AG         ++         +   +  +LG
Sbjct: 174 RLAARLVGVNVATVMALAFGGSAAIGAIAGILITP--ITLTSYDVGTLLALKGFAAAMLG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM +         +L  +     G     +   + F             I +  V+ +  
Sbjct: 232 GMGNPLGAVIGGLLLGLLESFGAGYVSSTYKDAIAF-------------IVILAVLFVAP 278

Query: 337 HSLLRLRT 344
             L+  RT
Sbjct: 279 QGLVGRRT 286


>gi|159044973|ref|YP_001533767.1| putative-binding-protein-dependent transport system permease
           [Dinoroseobacter shibae DFL 12]
 gi|157912733|gb|ABV94166.1| putative binding-protein-dependent transport system permease
           [Dinoroseobacter shibae DFL 12]
          Length = 327

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/298 (13%), Positives = 86/298 (28%), Gaps = 23/298 (7%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
             A  +   +  +       ++ A G  IV+     + L+     A+      ++     
Sbjct: 28  FPAFIAPSNLAHVFNDTSPLILLAIGQMIVI-LTRCIDLSVAANLALTGMVVSMVNVAAP 86

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
               ++I   A+  G    +     +        + TL    IF+ I+            
Sbjct: 87  GLPIVVILAIAIGLGTLLGMFNGLLVWKLQIPPIVVTLGTMTIFRGIIF----------- 135

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                 L   G  V S      F +      + +  +            + + RT +  A
Sbjct: 136 ------LISDGKWVNSHEMSPAFKAFPRAELLGLPVLSWIAILAVILFTIVMTRTTLGRA 189

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
           +     N  A       +   +  AF +S A  G+ G  + +       D+    E  +V
Sbjct: 190 FYAAGGNPHAATYAGIDVGKTQFWAFTISGALAGLTGYLWVSRFAVSYVDIAGGFELDVV 249

Query: 270 ISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + V     I+GG+ ++         L  +      ++   F  L     +  +    
Sbjct: 250 AACVIGGVSIMGGVGTVGGALLGALFLGIIKNALPVVDISPFWQLAISGGAIIIAVAL 307


>gi|55822189|ref|YP_140630.1| ABC transporter permease [Streptococcus thermophilus CNRZ1066]
 gi|55738174|gb|AAV61815.1| ABC transporter permease protein [Streptococcus thermophilus
           CNRZ1066]
          Length = 659

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 90/308 (29%), Gaps = 34/308 (11%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
              + +   Q L++ + A G+ I    L L  L     + +GA +  I+           
Sbjct: 361 SNVVLTSISQGLLWAIMAIGVFITFRILDLADLTAEGTFPLGAATTTIMIIHGIN-PIFA 419

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
                +     G + G    K +   L    + ++ ++   L+         +G      
Sbjct: 420 TLGGFVAGMFAGAVSGFMHTKMKIPALLTGIITLTGLYSVNLLVLGSANISLSGHN---- 475

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                +     +  + L    L   +++ L  T +  A R   D
Sbjct: 476 -----------TLVTMVMGLGLSKLSGVILLGLIFVSLVVFMLVVLLNTQVGLALRATGD 524

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N     +    +   K+  + +S+  I ++GA  A +      +M   +    + +I   
Sbjct: 525 NLAMGEANGIKVDRMKILGYMISNGLIALSGALLAQNNGYADMNMGTGTIVTGLAAI--- 581

Query: 276 GGMTSLSKIAKATAILIGVV------ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
                      A  I+  +        +  G   Y    ++    + + +   L    L 
Sbjct: 582 ---------ILAEVIVKYLPLGKRLWSIVVGAVLYRLVLVMILAMNVDAQMLKLASAILL 632

Query: 330 LVILMRSH 337
            +IL    
Sbjct: 633 AIILYVPE 640


>gi|42779814|ref|NP_977061.1| ribose ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|52144644|ref|YP_082184.1| ribose ABC transporter, permease [Bacillus cereus E33L]
 gi|118476353|ref|YP_893504.1| ribose ABC transporter permease [Bacillus thuringiensis str. Al
           Hakam]
 gi|196047109|ref|ZP_03114327.1| ribose ABC transporter, permease protein [Bacillus cereus 03BB108]
 gi|222094422|ref|YP_002528481.1| ribose ABC transporter , permease [Bacillus cereus Q1]
 gi|225862646|ref|YP_002748024.1| ribose ABC transporter, permease protein [Bacillus cereus 03BB102]
 gi|228944420|ref|ZP_04106793.1| Ribose ABC transporter [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228983870|ref|ZP_04144064.1| Ribose ABC transporter [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|229089730|ref|ZP_04220991.1| Ribose ABC transporter [Bacillus cereus Rock3-42]
 gi|229154370|ref|ZP_04282490.1| Ribose ABC transporter [Bacillus cereus ATCC 4342]
 gi|229194987|ref|ZP_04321767.1| Ribose ABC transporter [Bacillus cereus m1293]
 gi|42735731|gb|AAS39669.1| ribose ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|51978113|gb|AAU19663.1| ribose ABC transporter, permease [Bacillus cereus E33L]
 gi|118415578|gb|ABK83997.1| ribose ABC transporter membrane protein [Bacillus thuringiensis
           str. Al Hakam]
 gi|196022090|gb|EDX60779.1| ribose ABC transporter, permease protein [Bacillus cereus 03BB108]
 gi|221238479|gb|ACM11189.1| ribose ABC transporter, permease [Bacillus cereus Q1]
 gi|225787618|gb|ACO27835.1| ribose ABC transporter, permease protein [Bacillus cereus 03BB102]
 gi|228588503|gb|EEK46541.1| Ribose ABC transporter [Bacillus cereus m1293]
 gi|228629194|gb|EEK85901.1| Ribose ABC transporter [Bacillus cereus ATCC 4342]
 gi|228693629|gb|EEL47331.1| Ribose ABC transporter [Bacillus cereus Rock3-42]
 gi|228775849|gb|EEM24221.1| Ribose ABC transporter [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228815322|gb|EEM61570.1| Ribose ABC transporter [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 311

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 96/312 (30%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLALIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +     +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMAV--GLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|324324709|gb|ADY19969.1| ribose ABC transporter, permease protein [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 311

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 96/312 (30%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLALIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +     +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMAV--GLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|256425030|ref|YP_003125683.1| inner-membrane translocator [Chitinophaga pinensis DSM 2588]
 gi|256039938|gb|ACU63482.1| inner-membrane translocator [Chitinophaga pinensis DSM 2588]
          Length = 286

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 88/302 (29%), Gaps = 29/302 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +  + A GL ++ G LG+++L     Y +GA            S WL + +
Sbjct: 5   LLNGLFWGSLIALIALGLCMIYGQLGIINLAHGECYMLGA-VIAFYVISITGSFWLSLII 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +    G+++    L+     ++   +    +   +         G            
Sbjct: 64  APALVTILGLLIERFVLRKIERDISATLIATYAVSLCLQYIVLYFFGGAPQRIADP---- 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        F      Y  +  ++++  C L A    +L  T      +    +  
Sbjct: 120 ---------IGIIFNLGGTGYPAYRIFIIIMACILFAGFTYFLNYTRYGLWVKGAGQDPY 170

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   I    L  F +SS F  +AG   A                ++    VI+GG 
Sbjct: 171 LAKVSGVPIKSIYLITFGLSSGFAALAGVLAAP--ITAVEFRMGTDIIVLAFMAVIIGGF 228

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL     A+ I+  +      +    +  +L    +              L I  R   
Sbjct: 229 GSLQGTFIASVIIGIIECELTSIMEAAYAKVLLLLLTC-------------LFIFFRPEG 275

Query: 339 LL 340
           L 
Sbjct: 276 LF 277


>gi|86750729|ref|YP_487225.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86573757|gb|ABD08314.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 305

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 84/290 (28%), Gaps = 22/290 (7%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+++ G + + +        +  Y    L + + +   L  P+        G +  
Sbjct: 36  VAVGLALIFGLMDVTNFAHGEFLMLAMYITFFLFTFFAIDPLLSAPLVGGAMFLFGAVAY 95

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           L  ++F       A    + I    +     +     G+          +   S +    
Sbjct: 96  LFVIRF-------AMRAKANIGMVQIFTTFGLAILMRGLAQYFFTPDYRSINVSWLGGKT 148

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                +   +      L       ++  ++++T    A    R++  A   +        
Sbjct: 149 ISFGGIFLPVPQLVGALVSLAAFGALYFFMKKTDFGRALEATREDAGAVALVGIDKNKVF 208

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              + + SA IG+AGA  A             S  +I    V LGG  S+        I+
Sbjct: 209 ALGWGLGSALIGLAGAVMAMFFYI--YPDVGASFALIAYVTVALGGFGSVFGAFAGGIIV 266

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             V      +      ++              +     LV+ +R   L  
Sbjct: 267 GLVEATTALLLPPSLKAVG-------------IYAVYLLVVFIRPRGLFG 303


>gi|83592674|ref|YP_426426.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
 gi|83575588|gb|ABC22139.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
          Length = 343

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 92/315 (29%), Gaps = 14/315 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   L V+  L++            +  M    ++  +F  G+ IV+ + GL     V  
Sbjct: 32  ITLGLIVLVSLVVGAISPEFWQVSNLFDMARASVVSGLFGLGVLIVLATGGL----DVSF 87

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            AI A +  ++                +  GA G  +           L   +LI++   
Sbjct: 88  TAIAALTMYVITKTVTDYAPGTPIAVILACGAAGGALIGALNGQLVHSLKAPSLIVTIGT 147

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           Q ++  +     G                           S  ++    +  V++ +   
Sbjct: 148 QYVIRGFLLTFIGTGLFMNIPLSMEAFGKYELWRSEAGNGSIAILPAYVLVLVVVSVVTW 207

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
                    RT I  A   +  +      L   +   ++ AF  +    G+AG    +S 
Sbjct: 208 WIL-----NRTLIGRAVYAVGGSPAIAERLGYNLRKVRVFAFMYAGLLAGIAGIIHVSSN 262

Query: 254 DRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              +P     SE  ++ ++V     I GG  S+        ++  +  +           
Sbjct: 263 RLANPFDLAGSELDVIAAVVLGGARITGGSGSVVGTLLGVVLVTLINNVLILAGVPSTWQ 322

Query: 309 LLKFDCSFNMRHTTL 323
            +       +  T  
Sbjct: 323 KVIVGIFIVLAGTLF 337


>gi|329935020|ref|ZP_08285034.1| putative sugar uptake ABC transporter permease protein
           [Streptomyces griseoaurantiacus M045]
 gi|329305265|gb|EGG49122.1| putative sugar uptake ABC transporter permease protein
           [Streptomyces griseoaurantiacus M045]
          Length = 321

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 92/290 (31%), Gaps = 31/290 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +     +  ++  +      S +   +  +Q+   ++ A G+++V+G+ G + L+     
Sbjct: 26  VYAGVALLLIVNIVITPHFLSAENFRTQAVQVAPVIIVALGMALVIGTEG-VDLSVGAVM 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +      L   L + + A ++G                 LA   L+     Q
Sbjct: 85  ALAASVLALYLGYGLLPALLAVALFAAVAG-----------------LANGALVALLGVQ 127

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+     +  G         +  +       +      S      + + Y++L    L+
Sbjct: 128 PIVATLALMVGG-------RGIALVMLPQLEDLHNPSLASLGSGDIVGVPYLILIAAALA 180

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I   +RRT        I D++ A       +    +  + VS     +AG    A   
Sbjct: 181 VLIAFVVRRTTFGRQLLAIGDSRPAAQLAGLPVRRVLMVVYVVSGLLAAVAGVLATARLQ 240

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELC 298
              P        +  I+ V++      GG  S+        ++  +    
Sbjct: 241 ASDPTSLGNLMELSAITAVVVGGTPLTGGRISIGGTVAGAVLIQLLTATL 290


>gi|289450553|ref|YP_003474384.1| putative ribose transport system permease RbsC [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|289185100|gb|ADC91525.1| putative ribose transport system permease protein RbsC
           [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 337

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/320 (10%), Positives = 97/320 (30%), Gaps = 20/320 (6%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + +      L ++  +L  +          + ++  Q  +  + + G+ + + + G + L
Sbjct: 11  SSWLGTFLALLLLCVVLAIVTPTTFLKADNLMNILKQTSVNALISTGMLVCLITAG-IDL 69

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +             +L ++   SI++ IP + ++    G+I G    +    +  ++TL 
Sbjct: 70  SVGANAIACTCLIGLLHTKGIDSIFVAIPAALILGTIIGVINGSLLTRLHLPHPFVSTLG 129

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           M  I     +                    +      ++    +    V     +    +
Sbjct: 130 MKNILAGAALLLVNSR-------------MVSGFKEPIMWLGSYSIIKVPGFPGIPVSFI 176

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  L A + ++L +TA+  +   +  N +A               +A+S    G+A   
Sbjct: 177 LVIVLFAVMHIFLTKTALGRSIYCVGGNPEAARLSGINSANVLTFCYALSGFMCGIAAIV 236

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMN 302
                   +        +   I+  I+GG        ++        I+  +      ++
Sbjct: 237 LIGRTSIANGANAIQPYDTDAIAACIIGGASFMGGKGTMIGTMIGALIISVLRNGFTLLS 296

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
                  +       +    
Sbjct: 297 ASAAVQYVILGLVIIIAVLI 316


>gi|228932095|ref|ZP_04094987.1| Ribose ABC transporter [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228827678|gb|EEM73420.1| Ribose ABC transporter [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 311

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 96/312 (30%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLALIIIVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +     +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMAV--GLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|226939145|ref|YP_002794216.1| ABC transporter permease protein [Laribacter hongkongensis HLHK9]
 gi|226714069|gb|ACO73207.1| ABC transporter permease protein [Laribacter hongkongensis HLHK9]
          Length = 293

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 96/305 (31%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A ++ +     GL  W  +  
Sbjct: 8   LVGGLLAGVMYSLVALGFVLIYKASGVFNFAQGALVLFAALTF-VSLQAMGLPFWGSLLA 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I    G+ +    L+   +   I   + +      +     +  G            
Sbjct: 67  TLVIMVGMGIAIERVVLRPLVNQPPITLFMATIGLSFFIEGLAQLVWGTE---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I    F  + V    F  +       L A +  + + T +  A R + D+ +
Sbjct: 117 -VHGLELGITDEPFEVAGVFISRFDLFAAGLSALLVAVLAAFFQYTKLGRALRAVADDHQ 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +       + V+     ++G  + +               +  + ++ILGG 
Sbjct: 176 AALSVGIPLQHIWAVVWGVAGFVALVSGLLWGSRL---GVQFALTLVVLKALPVLILGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+    +L       Y +  ++              +   + +L+R   
Sbjct: 233 TSVPGAIVGGLIVGAGEKLAEVYLGPYLSGGIENWFP---------YMLALVFLLVRPEG 283

Query: 339 LLRLR 343
           L   R
Sbjct: 284 LFGER 288


>gi|172060385|ref|YP_001808037.1| inner-membrane translocator [Burkholderia ambifaria MC40-6]
 gi|171992902|gb|ACB63821.1| inner-membrane translocator [Burkholderia ambifaria MC40-6]
          Length = 312

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 96/312 (30%), Gaps = 21/312 (6%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +     L+  M + GL+++    G+L+      Y +GAY    + +  G    L++   A
Sbjct: 10  NGLSYGLLLFMLSAGLTLIFSVQGVLNFAHASFYMLGAYVGYSIAAGAGFWPALVLAPLA 69

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +     G    L                       +L+ +        G  +   L  L 
Sbjct: 70  VGLLGAGCERWLL----------RRVQARGGHTSELLLTFGLAYLIGEGAKLVWGLTPLP 119

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             +  L       +  +    +  +++     +  ++   LR + I    R    ++ A 
Sbjct: 120 APMPPLFDGAPVTAFGLALPRYRLFMMAMSAAMLIALGALLRASRIGLVVRAALTHRAAV 179

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +L   +       F   +A   +AG   A     +       +   +V ++V++GG+ S
Sbjct: 180 EALGYDVPRVMTGLFGAGTALAALAGVIGAPLA--VIEPALAETVGSVVFAVVVIGGLGS 237

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN---------MRHTTLMVIALFLV 331
           L     A+  +          +    +   +   +                +  + L  V
Sbjct: 238 LGGAFVASLAVGFAQTFAASSDTSLRDLAQRAGVALPDSVAAVSIAQLAPLVPYLLLVAV 297

Query: 332 ILMRSHSLLRLR 343
           ++ R   L   R
Sbjct: 298 LVARPRGLFGER 309


>gi|312960517|ref|ZP_07775024.1| sugar ABC transporter, permease protein [Pseudomonas fluorescens
           WH6]
 gi|311285251|gb|EFQ63825.1| sugar ABC transporter, permease protein [Pseudomonas fluorescens
           WH6]
          Length = 340

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 95/320 (29%), Gaps = 24/320 (7%)

Query: 12  DKILCLLAVVYPLLLFLFLG----ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
              L L+ +     +F ++        + + +  M +Q+ I  + A G++ V+ + G + 
Sbjct: 25  SIFLVLIGIGLVFEVFGWIVRDQSFLMNSQRLVLMILQVSIIGLLAIGVTQVIITTG-ID 83

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+ A     L              S         +  LP        L +  L
Sbjct: 84  LSSGSVLALSAMIAASLAQ-----------TSDFSRAVFPSLTDLPVWIPVAMGLGVGLL 132

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +     I +   P      G+ V+ R      T    +       + + +      + 
Sbjct: 133 AGAINGSIIAVTGIPPFIATLGMMVSARGLARYYTEGQPVSMLSDSYTAIGHGAMPVIIF 192

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +        + LR T        I  N +A  +    +    +  ++++    G+AG 
Sbjct: 193 LVVA---VIFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLIIVYSIAGLLAGLAGV 249

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
             +A        M    E   + + VI      GG+  ++       IL  +      + 
Sbjct: 250 VASARAATGQAGMGMSYELDAIAAAVIGGTSLAGGVGRITGTVIGALILGVMASGFTFVG 309

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              +   +       +    
Sbjct: 310 VDAYIQDIIKGLIIVVAVVI 329


>gi|306841037|ref|ZP_07473761.1| monosaccharide-transporting ATPase [Brucella sp. BO2]
 gi|306288926|gb|EFM60226.1| monosaccharide-transporting ATPase [Brucella sp. BO2]
          Length = 332

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 93/311 (29%), Gaps = 23/311 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++  +   L         S   + ++     I ++ A G   V+     + L+     A 
Sbjct: 14  VIIALMVGLFTSRAPGFASAHNLANIFNDTSILIIIALGQMAVI-LTKAIDLSVAANLAF 72

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
              +  +L + Y     +L+ V A+  GA    +    +        + TL    I++ +
Sbjct: 73  TGMAVAMLNATYPGLPLVLLIVLAIGIGAVLGAINGILVWKLNIPAIVVTLGTLTIYRGM 132

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                                  G  V +      F ++     + +  +      + A 
Sbjct: 133 AFVLSG-----------------GAWVNAHQMTAPFLNTPRTPFLGLPLLGWTAILIIAL 175

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           I + + RT    A      N  A       +   +  AF +S A  G+ G  + +     
Sbjct: 176 IYVLMTRTFFGRALYASGGNPTAAIYTGIDVGRTRFFAFVLSGALAGLCGYLWVSRYAVA 235

Query: 257 SPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
             D+    E   V + VI     LGG+ +++        L  +      ++   F  +  
Sbjct: 236 YVDVAAGFELDSVAACVIGGISTLGGIGTVAGAVLGALFLGVIKNALPVIDISPFWQMAI 295

Query: 312 FDCSFNMRHTT 322
                 +    
Sbjct: 296 SGSVIILAVIF 306


>gi|316935582|ref|YP_004110564.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315603296|gb|ADU45831.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 290

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 87/308 (28%), Gaps = 27/308 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ S      +Y + A G ++V  +  +++        +G    V   +         +
Sbjct: 6   QFLISGLTVGAVYALVALGFTLVYHAADVVNFAQGEFVMLGGMVTVFAYAAGVPLPLAAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +      ++  L     RG       +I       +    + +             
Sbjct: 66  LAVIVAVVVGLLLYWLAIAPARGASAVSLIIITIGASILLRGAAQIV------------F 113

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + +            + +    +VL G   +  ++   + RT I  A      N
Sbjct: 114 DKQFHKLPAFSGDAPIHLLGAVIQPQSLWVLGGAALVVLTLYYVMERTLIGKAVVATAAN 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +      AF  S+A   +AG         ++         +   +  +LG
Sbjct: 174 RLAARLVGVNVATVMALAFGGSAAIGAIAGILITP--ITLTSYDVGTLLALKGFAAAMLG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM +         +L  +     G     +   + F             I +  V+ +  
Sbjct: 232 GMGNPLGAVIGGLLLGLLESFGAGYVSSTYKDAIAF-------------IVILAVLFVAP 278

Query: 337 HSLLRLRT 344
             L+  RT
Sbjct: 279 QGLVGRRT 286


>gi|227873289|ref|ZP_03991554.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Oribacterium sinus F0268]
 gi|227840856|gb|EEJ51221.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Oribacterium sinus F0268]
          Length = 324

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 86/320 (26%), Gaps = 16/320 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            +    ++    V+  ++  L            ++          A G++ V+ S G + 
Sbjct: 7   FSNQQAVVVAALVIICVVFSLLTDKFLQGTTFTNISKSAYYVAFMAIGVTFVI-STGGID 65

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+        A     L         +L+    ++ G+   ++    +        IATL
Sbjct: 66  LSIGTVAICCALIGGTLMENGLPMPLVLLV--ILLCGSLFGLINGILVSRLELPAFIATL 123

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               + + +                                 F       +         
Sbjct: 124 GTMMVSRGL--------GSIVSKTKTISFPQGSAEGAWFREIFMVTKDGGLLPKNFPTGF 175

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L + F +A + + L +T       +I  N++A       +   +  A+  S  F  +AG 
Sbjct: 176 LLLAFCAAVMAVVLNKTRTGRYILSIGSNKEATRLSGINVKKYETLAYVFSGFFAALAGI 235

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
            + A      P+     E   +  +VI      GG+ S+        I+  +      + 
Sbjct: 236 AYVAVFSTAQPNTGNGFELDAIAGVVIGGTSLSGGVGSILGTIIGVFIMTVLKIGFPYIG 295

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
                 L             
Sbjct: 296 VQSHYQLFITGIILVFAVYM 315


>gi|206560023|ref|YP_002230787.1| putative ribose transport system, permease [Burkholderia
           cenocepacia J2315]
 gi|198036064|emb|CAR51958.1| putative ribose transport system, permease protein [Burkholderia
           cenocepacia J2315]
          Length = 339

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 97/320 (30%), Gaps = 28/320 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+ Y  +   LA +  L   L         +  ++  QI   V+ + G++ V+   G + 
Sbjct: 32  LSNYLGLAGALAAMIALFSVLSSHFLTYDTF-STIANQIPDLVVMSVGMTFVLIIAG-ID 89

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+ A    +   ++         +   ++ A G + G  ++ +R       +L
Sbjct: 90  LSVGSVLALAASMVSVAALKWQWGPLPAALIGIAVATATGALTGAVTVGWRIPSFI-VSL 148

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            + E  + +  +         G                      F        + +    
Sbjct: 149 GVLEAARGLAYQLTNSRTAYIGDA--------------------FDFLSNPIALGISPAF 188

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    +  +    L RT        I  N++A           K+  FA+  A  G+A  
Sbjct: 189 LIAVAVMIAAQFVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKILVFALMGALAGLASL 248

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
           F  +  +   P+     E  ++ ++VI     +GG  S+        I+  +      + 
Sbjct: 249 FQISRLEAADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIG 308

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
                  +       +    
Sbjct: 309 ANEPTKRIITGAVIVVAVVL 328


>gi|17228779|ref|NP_485327.1| permease protein of ABC transporter [Nostoc sp. PCC 7120]
 gi|17130631|dbj|BAB73241.1| permease protein of ABC transporter [Nostoc sp. PCC 7120]
          Length = 288

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 81/288 (28%), Gaps = 13/288 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      I  + A GL++  G L L +        +GAY    + +        +I  
Sbjct: 9   IVNGIAVGSIIALAAVGLTLTYGILRLSNFAHGDFLTLGAYLTFFVNTFGVNIWLSMIVA 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                G   +   L   + R       TLI+  I   + ++                ++ 
Sbjct: 69  VVGTVGVMLLSEKLLWSRMRSIRANSTTLIIISIGLALFLR-----------NGIILIWG 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L          V        VL        ++   L+ T I  A R + D+  
Sbjct: 118 GRNQNYNLPITPALDIFGVKVPQNQLLVLALAVLSIGALHYLLQNTKIGKAMRAVADDLD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   +       + ++     + G+ +             +   + + + VILGG+
Sbjct: 178 LAKVSGIDVEQVIFWTWLIAGTVTSLGGSMYG--LITAVRPNMGWFLILPLFASVILGGI 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            +      A  I+  V E+        +   +       +       +
Sbjct: 236 GNPYGAIAAAFIIGIVQEVSTPFLGSQYKQGVALLIMILVLLIRPKGL 283


>gi|83954280|ref|ZP_00963000.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83841317|gb|EAP80487.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
          Length = 343

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/342 (12%), Positives = 97/342 (28%), Gaps = 48/342 (14%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS------------------ 80
           + +   +   Y + A GL+++ G+LG+++      + IGA+                   
Sbjct: 8   LLNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFCAVTLSKIFTLSHKASEPS 67

Query: 81  -------------------YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
                              +      + L   + + +   +     +   +     +  Y
Sbjct: 68  GVDFLGKPKYEDILYIKDWFGETAGAWMLDWSVPLSILFAVPIMLAIGFVMERGLIKHFY 127

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                  +   F   ++  + I        +                   F  + +IY  
Sbjct: 128 KRPHADQILVTFGLAIVLQEVIKYFYGANPIPTSAPEAFRGSFDFGVMLGFDPNAIIYPY 187

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
           +          +   +  +L+ T      R    +++    L   I       F +++A 
Sbjct: 188 WRLIYFAFSAVIIGGVFAFLQFTTFGMVVRAGMADRETVGLLGINIDKRFTIMFGIAAAV 247

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AG  +A            F     V+ +V    M SL     A  +L  +       
Sbjct: 248 AGLAGVMYAPINSPNYHMGMDFLVLSFVVVVVGG--MGSLPGAVLAGFLLGILES----- 300

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
               F S+ +           ++ +   L++L R   L+  +
Sbjct: 301 ----FASMNEVKNILPGIDQIIIYVVAILILLTRPRGLMGRK 338


>gi|260168306|ref|ZP_05755117.1| ribose ABC transporter, permease protein [Brucella sp. F5/99]
 gi|261757764|ref|ZP_06001473.1| tetracycline resistance protein TetB [Brucella sp. F5/99]
 gi|261737748|gb|EEY25744.1| tetracycline resistance protein TetB [Brucella sp. F5/99]
          Length = 334

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 93/319 (29%), Gaps = 17/319 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +       L ++  +L  +      S   + ++  +     + A G + V+ S G L L+
Sbjct: 21  RAVAPFVALLLLLLILGTIANPNFISIDNLLNVATRSAFIAIIALGATYVI-SSGGLDLS 79

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A  A   ++  +   ++  +L+ ++A++                     I   I 
Sbjct: 80  VGAMVAFVASIMILFMNSGMIADPVLMLIAAVMLALVVGAACGLLNGIITTVGGIEPFIA 139

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +     I                         T+R+      +  ++    + +   ++ 
Sbjct: 140 TLGTMGIYRGLTTW-----------LSQGGAITLRNPEIQSLYRPAYFGSVLGVPVPVIV 188

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +A     L RT        +  N+        ++   +  AF +    + +A   +
Sbjct: 189 IFVTAALAAFVLYRTRYGRHIIAVGSNEDVARYSGISVKKVRTIAFVIQGLCVAVAVLLY 248

Query: 250 AASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFY 304
                  S       E   + ++V+      GG+  +        IL  +  +    +F 
Sbjct: 249 VPRLGSTSATTGLMWELQAITAVVVGGTALRGGVGRIWGTICGAFILEIIGNIMLLSSFV 308

Query: 305 YFNSLLKFDCSFNMRHTTL 323
               L     +  +    +
Sbjct: 309 SEYLLGAIQGAIIIIAMLV 327


>gi|188035726|dbj|BAG32264.1| putative sugar ABC transporter, permease protein [Pantoea ananatis]
          Length = 355

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 87/312 (27%), Gaps = 10/312 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      + +    +   +  M   + I  + A G+++V+   G + L+      
Sbjct: 17  FIALLIVVGFFSVMVPNFLTPSNLLIMTQHVAITGLLAIGMTLVI-LTGGIDLSVGAVAG 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I      ++      S   L   + +      +I+ +         +    +    +   
Sbjct: 76  I----CGMVAGALLTSGVPLWNGARLFLNVPEVILTVALFGTLVGIVNGTIITRLGVAPF 131

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I           A +   D   +        +    F        + ++  +  M     
Sbjct: 132 ICTLGMMYVARGAALLFNDGATYANLVGMPALGNTGFALLGSGTVLGVFIPIWLMIGFLL 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +   R+T +         N+ A       II  K+  +A S    G+ G   A+    
Sbjct: 192 LGLYLTRKTPLGRYIYATGGNESAARLAGVPIIKVKVFVYAFSGLCAGLVGLVVASQLQT 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + V     + GG   +S       +++ + +    M    F  ++
Sbjct: 252 AHPMTGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFLADGMVMMGVSDFWQMV 311

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 312 IKGVVIVTAVVI 323


>gi|91789239|ref|YP_550191.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91698464|gb|ABE45293.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas sp. JS666]
          Length = 290

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 97/305 (31%), Gaps = 22/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       ++  + A GL++ +G +  ++L       +G Y  V+L  R G+   L +P+
Sbjct: 5   LFDGIAYGMLLFVLAVGLAVTMGLMNFINLAHGAFAMVGGYITVLLMQRLGMPFLLCLPL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   +   G ++     +       +  ++ S     + +       G     +      
Sbjct: 65  AFAGAALLGGVLERTLYRPMYARPHLDQVLFSIGLTFMAVASMDYFMGSTQQIIQLP--- 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                          S  +    +  +++     L+ ++   L RT   +  R   D+Q+
Sbjct: 122 ---DWLRGRTEIGSGSWILGMGHYRLFIVAVCAALTLALQYVLARTRFGSRLRASVDDQR 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +    LS FAV S   G+ GA  A          F     I  + +V +GG 
Sbjct: 179 VAAGLGINVNVVFLSTFAVGSGLAGLGGALGAEVLGL--DPTFPLKFMIYFLIVVAVGGT 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S++                         + +            ++   +  +++ R   
Sbjct: 237 SSITGP--------------LLAALLLGIADVAGKYYIPKLGAFIVYSLMIAILIWRPQG 282

Query: 339 LLRLR 343
           L   +
Sbjct: 283 LFVRK 287


>gi|162420094|ref|YP_001605770.1| sugar ABC transporter permease [Yersinia pestis Angola]
 gi|162352909|gb|ABX86857.1| ABC sugar transporter, permease subunit [Yersinia pestis Angola]
          Length = 314

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 75/262 (28%), Gaps = 20/262 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +   +  +     I  + A GL  VV   G + ++     AI  Y         G 
Sbjct: 33  PEFLTLGNLTDVATSYAILGILACGL-FVVLIAGGIDISFPAVTAIAQYVMASWVITQGG 91

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S  L + ++  +    G+I GL     +      A +I               TNG    
Sbjct: 92  SFPLALVMAMAVGLLLGLINGLLVYWLKV----PAIIITIATLNLFYGLLVYFTNGTWLY 147

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
              D                        Y+  +   LL +        + +  T +    
Sbjct: 148 GFPDWFMTGINWFSFE--------GSDGYDYGLTLPLLCLAGTIIFTGVMMNYTRLGRQI 199

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N+ A   L   I    L  +       G+A    A     ++P+       + V+
Sbjct: 200 FAMGSNKDAASRLGINIFRLHLYVYGYMGILAGVAAVVQAQISQSVAPNSL-MGFELTVL 258

Query: 271 SIVIL------GGMTSLSKIAK 286
           + V+L      GG  SL+    
Sbjct: 259 AAVVLGGTSMSGGRGSLTGTVL 280


>gi|160935656|ref|ZP_02083031.1| hypothetical protein CLOBOL_00546 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441400|gb|EDP19110.1| hypothetical protein CLOBOL_00546 [Clostridium bolteae ATCC
           BAA-613]
          Length = 313

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 84/312 (26%), Gaps = 25/312 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++    + +   + ++     S+  Q  I  + A+G++ V+     + L+     
Sbjct: 17  ALIALILLVAGISIASPSFRTGANFLSLLRQSSINGLIAFGMTFVI-LTDAIDLSVGSVL 75

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       + S    +   +I    +      +   + +                    
Sbjct: 76  ALSTALCAGMISAGVPAGLAMILALVLGCAMGVISGVMVTKGRLQP--------FIATLI 127

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +          G  +++        V    +F+  P             ++ +  L 
Sbjct: 128 TMTVYRGLTMIYTNGKPISNLGDSFILKVVGKGKFYGVPIP-----------VILLILLF 176

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L +T           N K+       I   K+ A+A+S     ++G    +   
Sbjct: 177 LLFYFLLNKTTFGRRIYATGSNWKSAKLAGVNIHRTKIIAYAISGTMAALSGLILLSRLG 236

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P +    E   + ++      + GG   +        I+  +      +    +   
Sbjct: 237 SAQPTLGNGYELDAIAAVALGGTSMSGGRGKIYGTLIGVLIIAVLNNGLNILGVSSYYQD 296

Query: 310 LKFDCSFNMRHT 321
           +       +   
Sbjct: 297 VIKGLVILIAVL 308


>gi|326389660|ref|ZP_08211226.1| inner-membrane translocator [Thermoanaerobacter ethanolicus JW 200]
 gi|325994375|gb|EGD52801.1| inner-membrane translocator [Thermoanaerobacter ethanolicus JW 200]
          Length = 288

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 84/289 (29%), Gaps = 14/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      +Y + A GL ++  +  +++           +      + YG+S W    +
Sbjct: 6   LISGFATGGLYALAALGLVLIYKTSDVVNFAQGEMAMFSTFIAYTTMTSYGMSYWEAFIL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G I+    ++   +   ++ LI++     I+        G            
Sbjct: 66  ALLFASVLGFIVERFFIRPIQNAPVLSLLIVTLGLMMIVNGIAGWAFG------------ 113

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T     I          +        L+   F+   +   L+      A R   +N  
Sbjct: 114 FETHSFPAIVGGELKIFGAVISKSNLLTLVITVFIMGILFYMLKYALAGIAIRATSENPT 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       + VSS    +AG F A +       M          +  +LGG 
Sbjct: 174 IARLMGIAVNHVYSITWVVSSILGAIAGMFIAPTTFLDVNMMSSVLL--KAFTAAVLGGF 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           T+         IL  +  +  G      +S   F     M       + 
Sbjct: 232 TTFVGPVVGGLILGVLENIASGYISAQLSSTFAFALIVIMLWIKPTGLV 280


>gi|288817718|ref|YP_003432065.1| ABC-type branched-chain amino acid transporter permease component
           [Hydrogenobacter thermophilus TK-6]
 gi|288787117|dbj|BAI68864.1| ABC-type branched-chain amino acid transporter permease component
           [Hydrogenobacter thermophilus TK-6]
 gi|308751317|gb|ADO44800.1| inner-membrane translocator [Hydrogenobacter thermophilus TK-6]
          Length = 287

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 93/295 (31%), Gaps = 27/295 (9%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           Y M + G S++ G  G+++L       +GAY              L +    +++    +
Sbjct: 18  YSMLSSGFSLMWGVTGIINLAYGSFVLLGAYLLYT----------LYLSGVGLLTAFFIV 67

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
           +          +      L+  E F  +++ +         + +  +      +V+ L  
Sbjct: 68  LAVGLLSGAVLEMFFFNKLMNYEPFTLLVLTFGLDILLTNFLNLLFKADIRSLSVKGLE- 126

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                    I       V L    + +++  +L+ +    A R I  +            
Sbjct: 127 -GSLLLGDFIVPYNKLSVFLLSSLVISALQFYLKFSWTGKAIRAISADPIGAQLCGINPK 185

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
                + ++++A   ++G F+A  +     D    +       + ++GG+ S   +   +
Sbjct: 186 RVYTVSTSLATALAMISGGFYAFLQGFTPFDSESITLR--AFFVCVVGGLGSTHGLLAGS 243

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            IL              + + +               + L   ++ R   L+ ++
Sbjct: 244 FILASSEVFSGFYLGEGWKTAVSL-------------LILVFFLIFRPRGLIGIK 285


>gi|225571610|ref|ZP_03780606.1| hypothetical protein CLOHYLEM_07708 [Clostridium hylemonae DSM
           15053]
 gi|225159687|gb|EEG72306.1| hypothetical protein CLOHYLEM_07708 [Clostridium hylemonae DSM
           15053]
          Length = 328

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/327 (11%), Positives = 92/327 (28%), Gaps = 29/327 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            + L        ++  +   A      + ++     I  +   GL+ +    G L  +  
Sbjct: 18  RRWLLFFTAATAIVFGIISPAFLQVTNLLNILSNACIVGVMGVGLTCIFA-TGELDFSAG 76

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
              ++ +    ++  R     ++   +  ++      I         G    IATL  S 
Sbjct: 77  AQVSLASCLMAVILGRTSFHNYIGAVLLTLLVLGLVGIYNAFLHVKIGIPAFIATLGTSY 136

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           + +          N            F+                       +   ++ + 
Sbjct: 137 LVKGAAKALTNSKNVNNLSAWPKEFTFM---------------GQGYLFGIIPMPVVILV 181

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
              A I+ +   T        +  N  A   +       K+  F +++   G+AG    +
Sbjct: 182 IAGALILFYTEYTRAGKYLYAVGANPTACDYIGIDGRMQKVKGFVITAVLCGLAGIMQGS 241

Query: 252 SRDRISPDMFKFSENIIVISIVILG------GMTSLSKIAKATAILIGVVELCCGMNFYY 305
             +  SP     +  +  ++ V LG      G+ ++        +   + +    +    
Sbjct: 242 QMNAASPT-LGENMFVPALTTVFLGAAYGKIGVFNVPGTLVGAVLYALINQGLLMITSEL 300

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVI 332
           +        ++      L  + + +VI
Sbjct: 301 WLK------NYVQGGMLLFALIMVVVI 321


>gi|222087162|ref|YP_002545697.1| sugar ABC transporter [Agrobacterium radiobacter K84]
 gi|221724610|gb|ACM27766.1| sugar ABC transporter [Agrobacterium radiobacter K84]
          Length = 341

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/298 (12%), Positives = 83/298 (27%), Gaps = 17/298 (5%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                   + ++  +     + A G + V+ S G L L+     A  A   ++L +   +
Sbjct: 48  PNFIGMTNLTNVATRCAFIAIIAVGATFVI-SAGDLDLSVGAMVAFVASLMILLMNSGVI 106

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           +   L+  +A +      ++   +         I   I +       +    +  G    
Sbjct: 107 ADPTLMLAAAALFAIVAGVLCGLANGLITTMGKIEPFIAT-------LGTMGVYRGLTTW 159

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                   L +     +    +  S     + +  +L   C  +  +     RT      
Sbjct: 160 LSQGGAITLRSAEVQALYKPAYYGSVFGVPVPIVVILAVTCVAAFILY----RTRYGRHV 215

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N+         +   +  AF +    + +A   +       S       E   + 
Sbjct: 216 IAVGSNRDVARYSGVAVNRVRTVAFVIQGLCVAIAVLLYVPRLGSTSATTGILWELQAIT 275

Query: 271 SIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           ++V+      GG   +        IL  V  +    NF     L     +  +    +
Sbjct: 276 AVVVGGTALKGGAGRVWGTICGAFILELVGNIMLLSNFISEYLLSAIQGAIIIIAMLV 333


>gi|209573103|sp|A1JJ54|LSRC_YERE8 RecName: Full=Autoinducer 2 import system permease protein lsrC;
           Short=AI-2 import system permease protein lsrC
          Length = 360

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 87/291 (29%), Gaps = 31/291 (10%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             + +    +     I ++ A G ++V+     + ++      + A +  +     G  +
Sbjct: 37  YFNLQTFTMIFSSAQILILLAIGATMVM-LTRNIDVSVGSITGLCAVTVGM-ALNAGFGL 94

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA--TLIMSEIFQNILIKWKPITNGKAGI 150
            L    + ++    G   G+     R   +     TL +      +L   K I    A  
Sbjct: 95  ALSCLFALLVGMGAGFFNGILVTWLRIPAIVATLGTLGLYRGLMLLLTGGKWIEGLPA-- 152

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                                  S        +  +   +  L  ++ L L +TA   ++
Sbjct: 153 --------------------DLKSLSTPILFSISPIGWLIMLLIVAMALLLGKTAFGRSF 192

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
               DN +    L       ++ AF+++     +AG  FA+    I        E   + 
Sbjct: 193 YATGDNLQGARQLGIRTDSIRIFAFSMNGVMAALAGIVFASQIGFIPNQTGSGLEMKAIA 252

Query: 271 SIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + V     +LGG  ++        +L  +  +   +    + +        
Sbjct: 253 ACVLGGISLLGGTGTIIGAILGAYLLTQIDSVLVLLRLPAWWNDFIAGLVL 303


>gi|188583091|ref|YP_001926536.1| inner-membrane translocator [Methylobacterium populi BJ001]
 gi|179346589|gb|ACB82001.1| inner-membrane translocator [Methylobacterium populi BJ001]
          Length = 293

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 93/301 (30%), Gaps = 24/301 (7%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y + A G  ++  + G+ +        + A    +  +   +  WL   ++  I
Sbjct: 12  LLAGVMYALVAIGFVLIYKASGVFNFAQGA-MVLCAALTFVTLTERDVPFWLAGLITLAI 70

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                + +    L+   +   I   + +     ++        G +   +   L  L   
Sbjct: 71  MVTLAVAVERIVLRPLVNRSQITLFMATLGLSYVIEGGSQFVMGASVHELDLGLSDLPV- 129

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                         +    F     L    L  ++ L+  RT I  + R + D+ +A  S
Sbjct: 130 ----------AIGPIQLSSFDLVAALTAGALVLALWLFFERTRIGVSLRAVADDPQAALS 179

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +     + +AV+     +AG  + A +             +  + ++I+GG TS++
Sbjct: 180 IGIRLPVLWATVWAVAGFVALVAGLLWGARQ---GVQFSLTFVVLKALPVLIIGGFTSIT 236

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  I+     L            +    +                +L+R   L   
Sbjct: 237 GAIVGGLIVGAADALAEIYLGPLLGGSVSTWFA---------YALAVAFLLVRPAGLFGE 287

Query: 343 R 343
           R
Sbjct: 288 R 288


>gi|225570276|ref|ZP_03779301.1| hypothetical protein CLOHYLEM_06372 [Clostridium hylemonae DSM
           15053]
 gi|225161071|gb|EEG73690.1| hypothetical protein CLOHYLEM_06372 [Clostridium hylemonae DSM
           15053]
          Length = 321

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 38/321 (11%), Positives = 98/321 (30%), Gaps = 28/321 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +  L ++ VV  L+         +   + ++  Q  I  + +   + ++   G + 
Sbjct: 13  LRRTEFSLVIIIVVIFLVAAFGTDNFLTNYNLTNILKQCSIIGVISISATFII-ITGGID 71

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+C     +      +  +++G+++ + I ++  +S  CG+   +   +F+      ATL
Sbjct: 72  LSCGAICGMSTLIVAMGQAKWGMTVSVSILLALAVSVICGLYNAVIINEFKVPPFI-ATL 130

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I + ++                     +           +F         F+  + 
Sbjct: 131 GSMTILRGLVK-------------------VISNASTIAGLDKKFGEFASESVAFIPKLA 171

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +    +       L  T        +   Q+       +I       + ++    G+AG 
Sbjct: 172 VIWVIVVLLGFFILHSTTFGRNLYVLGSGQEVARLCGISIRRVTYMTYGIAGFLCGVAGV 231

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGM 301
             A+  +   P        +  I+  ++GG        S+   A  T ++  +       
Sbjct: 232 MLASRINSAVPTA-GTGYEMNAIAASVIGGASLSGAKGSVWGTALGTILMTLIDNAGIQF 290

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
               F   +       +    
Sbjct: 291 GINSFIMEISTGVLITIAVII 311


>gi|312621494|ref|YP_004023107.1| inner-membrane translocator [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312201961|gb|ADQ45288.1| inner-membrane translocator [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 328

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 95/299 (31%), Gaps = 24/299 (8%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                 + + + +  + +    + A G+++V+   G + L+      + A     L   Y
Sbjct: 40  LSPNFLTAENLITTALGLAADGILAIGMTVVL-VSGGVDLSVGSVLGLSAVIAGGLYLSY 98

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           G++IW+   ++ +I    G+  G    +     L +   +M                   
Sbjct: 99  GVNIWIGSFIALVICALIGLFNGYFIARIGIPPLIVTLAMMGIA---------------- 142

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
               A  +   G+ +        F        + + + +L    L       +R++A   
Sbjct: 143 --RGAAYVLTQGSPLSLYGNLKGFDFLGQGKVLGIPFFILFFIILIILFDFLMRKSAPFR 200

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               +  N+ A       +   K+S + + S   G+AG F  +     +P     SE   
Sbjct: 201 LVYYVGSNENAAKLSGINVPKVKISVYVLMSVLAGIAGIFTLSRFSVAAPTAGNGSELNA 260

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + VI      GG  ++      T ++  +      +N   +   L          T 
Sbjct: 261 ISACVIGGASLAGGEGTVLGAILGTILVGIINNALVLLNVSVYWQNLVSGVILIAAVTI 319


>gi|90423451|ref|YP_531821.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90105465|gb|ABD87502.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 335

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 50/334 (14%), Positives = 107/334 (32%), Gaps = 40/334 (11%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-------------- 84
           I +   +   Y + A GL++  G+LG+++      + +GA+  V+               
Sbjct: 8   ILNGLDKGGAYALIALGLTLAFGTLGVVNFAHGALFMLGAFCAVVFNKLLTLEIIRVDPT 67

Query: 85  -GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
             + +G  + +  P    + G  G I    S+           L++  I +  LI++   
Sbjct: 68  KLTPWGSPLEVKTPYVQAMLGDWGKIFIDYSVPMSILMAIPVMLLIGIIIERGLIRFFYK 127

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF--------------VIYEIFMYYVLLG 189
                 I V   L  +   +          +                ++Y  +    L  
Sbjct: 128 RPHADQILVTFGLAIVLQEIVKHFFGANPIAQSAPQIFSGSLQLTEAIVYPYWRIVYLAF 187

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              + A++  +L+ T      R    +++    L   I       F +++   G+AG  +
Sbjct: 188 SLAVIAAVFAFLQLTTFGMVVRAGMQDRETVGLLGINIERRFTIVFGLATVVAGLAGVMY 247

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                        F     V+ +V    M SL     A  +L  +           F S+
Sbjct: 248 TPIVPPDYHMGMDFLVLSFVVVVVGG--MGSLPGAVLAGFMLGILQS---------FASM 296

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            +           ++ +   +++L+R   LL  +
Sbjct: 297 NEVKSLVPGIDQIIIYLVAVVILLVRPRGLLGRK 330


>gi|306846266|ref|ZP_07478827.1| monosaccharide-transporting ATPase [Brucella sp. BO1]
 gi|306273261|gb|EFM55130.1| monosaccharide-transporting ATPase [Brucella sp. BO1]
          Length = 332

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 93/311 (29%), Gaps = 23/311 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++  +   L         S   + ++     I ++ A G   V+     + L+     A 
Sbjct: 14  VIIALMVGLFTSRAPGFASAHNLANIFNDTSILIIIALGQMAVI-LTKAIDLSVAANLAF 72

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
              +  +L + Y     +L+ V A+  GA    +    +        + TL    I++ +
Sbjct: 73  TGMAVAMLNATYPGLPLVLLIVLAIGIGAVLGAINGILVWKLNIPAIVVTLGTLTIYRGM 132

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                                  G  V +      F ++     + +  +      + A 
Sbjct: 133 AFVLSG-----------------GAWVNAHQMTAPFLNTPRTPFLGLPLLGWTAILIIAF 175

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           I + + RT    A      N  A       +   +  AF +S A  G+ G  + +     
Sbjct: 176 IYVLMTRTFFGRALYASGGNPTAAVYTGIDVGRTRFFAFVLSGALAGLCGYLWVSRYAVA 235

Query: 257 SPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
             D+    E   V + VI     LGG+ +++        L  +      ++   F  +  
Sbjct: 236 YVDVAAGFELDSVAACVIGGISTLGGIGTVAGAVLGALFLGVIKNALPVIDISPFWQMAI 295

Query: 312 FDCSFNMRHTT 322
                 +    
Sbjct: 296 SGSVIILAVIF 306


>gi|126732426|ref|ZP_01748225.1| ABC transporter, membrane spanning protein (ribose) [Sagittula
           stellata E-37]
 gi|126707065|gb|EBA06132.1| ABC transporter, membrane spanning protein (ribose) [Sagittula
           stellata E-37]
          Length = 335

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 95/309 (30%), Gaps = 25/309 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  + L     +  + + + ++  QI +  + A G+++V+   G + L      A
Sbjct: 38  LIGLVLLCIFLSFATDSFFTMRNLLNVLDQITVLGIMAVGMTLVILIGG-IDLAVGSVLA 96

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + +  G  + L I V+   + A G + GL    F                  
Sbjct: 97  LAMMVMGYVANVAGFPLGLAIIVALACAAASGAVSGLLITLFNVP-------AFISTLAM 149

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + I          G  +     +                +F+ +  F+   +  M  + A
Sbjct: 150 MSIARGLANMITDGQQIVGFPAWFSM------------LAFIRHWGFLTTTVAVMLIVFA 197

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
               +LR T+   +   I  N +        +    +  + VSS   G+ G   A   D 
Sbjct: 198 LGWFFLRYTSAGRSLYAIGGNPEVARLAGINVSLMTVGVYVVSSLLAGLGGVVLAMRLDS 257

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           + P      E   + ++VI      GG   +        I+  +      +    F   +
Sbjct: 258 VQPTAGFTYELDTIAAVVIGGTSLSGGQGGIVGTIIGVLIIGVLRNGLNLLGVSPFTQAV 317

Query: 311 KFDCSFNMR 319
                  + 
Sbjct: 318 VIGVVIALA 326


>gi|196035742|ref|ZP_03103145.1| ribose ABC transporter, permease protein [Bacillus cereus W]
 gi|218901864|ref|YP_002449698.1| ribose ABC transporter, permease protein [Bacillus cereus AH820]
 gi|228925856|ref|ZP_04088940.1| Ribose ABC transporter [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229120318|ref|ZP_04249568.1| Ribose ABC transporter [Bacillus cereus 95/8201]
 gi|195991709|gb|EDX55674.1| ribose ABC transporter, permease protein [Bacillus cereus W]
 gi|218535809|gb|ACK88207.1| ribose ABC transporter, permease protein [Bacillus cereus AH820]
 gi|228663128|gb|EEL18718.1| Ribose ABC transporter [Bacillus cereus 95/8201]
 gi|228833871|gb|EEM79424.1| Ribose ABC transporter [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 311

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 96/312 (30%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLALIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +     +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMAV--GLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTKIKVMIYGLSGILAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|225387089|ref|ZP_03756853.1| hypothetical protein CLOSTASPAR_00839 [Clostridium asparagiforme
           DSM 15981]
 gi|225046833|gb|EEG57079.1| hypothetical protein CLOSTASPAR_00839 [Clostridium asparagiforme
           DSM 15981]
          Length = 295

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/303 (10%), Positives = 83/303 (27%), Gaps = 25/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G +++   L   + +      + AY   ++  R+ L+   ++ +
Sbjct: 11  LLNGLSLGAVYAIIALGFTLIYSILKFSNFSHGGIMVVCAYFAYVIQRRFQLNFVSMMLI 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A        ++                L        +               +      
Sbjct: 71  TAAFGAILACLVQFV---------GFENLRAKRSNIMLYFVSSSTLGVLLQNIIVITFSS 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +         +   + +    +L     +  +++  L RT +  + R +  + +
Sbjct: 122 TYYAYPAFFTPPFVEVNGFTFSVSDMIMLGISAVVIIALMFLLYRTRLGISIRALSMDSE 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F +S A   +AG F   +                 +   ILGG+
Sbjct: 182 TVKLMGINVSVVVALTFMISGALAAVAGIFCGVNYILYPQLNQ---LVFKGMIASILGGL 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++S       +L  +              +  F  S              + +L+R   
Sbjct: 239 GNISGALYGGIMLGVLEVCFNNAFGAGLVPVFSFVFS-------------MIFLLVRPQG 285

Query: 339 LLR 341
           +  
Sbjct: 286 IAG 288


>gi|90419101|ref|ZP_01227012.1| permease protein, ABC-type branched-chain amino acid transporter
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90337181|gb|EAS50886.1| permease protein, ABC-type branched-chain amino acid transporter
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 295

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 108/315 (34%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    I    Y + + GL+++ G L +++      Y +GA++  ++ +
Sbjct: 4   IFGIPLPALLGQLLIGFINGSFYALLSLGLAVIFGLLRVINFAHGAQYMLGAFTAYLVLA 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL  W  + V+ +I      ++    L    D   +  L+ +     I+        G
Sbjct: 64  YTGLGFWPALIVAPLIVAMLSAVIERTMLSRLYDLDHLYGLLFTFGLALIIEGTFRYYFG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            AG                 +        F+    +  +V++    +  S  L + +T +
Sbjct: 124 AAGNPYPTPA----------LLAGGTNLGFMFMPNYRGFVVVASLVICISTWLLIEKTRL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N +   +    +       +A+ +   G+AG   A         +   +  
Sbjct: 174 GAYLRAATENPQLVQAFGVNVPLLLTLTYALGAGLAGLAGVLAAPIYQV--SPLMGSNLI 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           IIV ++V++GGM S+     +  +L  +  L                  +      ++ +
Sbjct: 232 IIVFAVVVIGGMGSILGAIISGYMLGILEGLTKVF--------------YPEASNIVVFV 277

Query: 327 ALFLVILMRSHSLLR 341
            + +V+++R   L  
Sbjct: 278 IMAIVLMIRPAGLFG 292


>gi|15643715|ref|NP_228763.1| ribose ABC transporter, permease protein [Thermotoga maritima MSB8]
 gi|222100595|ref|YP_002535163.1| Ribose ABC transporter, permease protein [Thermotoga neapolitana
           DSM 4359]
 gi|4981492|gb|AAD36034.1|AE001758_12 ribose ABC transporter, permease protein [Thermotoga maritima MSB8]
 gi|221572985|gb|ACM23797.1| Ribose ABC transporter, permease protein [Thermotoga neapolitana
           DSM 4359]
          Length = 331

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/318 (13%), Positives = 84/318 (26%), Gaps = 18/318 (5%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R+++Y  I  LL ++           T    +I  +  Q  + +  A G++ V+   G +
Sbjct: 15  RISRYQSIFILLGLIVLFSFLSNRFLTLENFWI--ILRQTAVNLCIAVGMTFVI-LTGGI 71

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+              L                + +    +          G     A 
Sbjct: 72  DLSVGSILGFSGAVTAKLLKYGL----------ILSAFGVVLKFNPLGASIIGVLAGFAI 121

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
            + +            +        V   +  L            F      + + +   
Sbjct: 122 GLFNGFIITRFNIPPFVATLGTMTAVRGFIMLLTKGHPITRLGDSFDFIGSGWFLGIPMP 181

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +      +   I  LR+T        +  N+KA           KL  +A+S     +AG
Sbjct: 182 VWIAAIATGVGIFILRKTQFGRYVYAVGGNEKAAVLSGVNSKLTKLWVYAISGILSAVAG 241

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
               A  D   P+     E   + + VI      GG  +L        I+  + +    +
Sbjct: 242 LIVTARLDSAQPNAGLMYELDAIAATVIGGASLSGGKGTLIGTVVGALIIGVLNDGLVLV 301

Query: 302 NFYYFNSLLKFDCSFNMR 319
               F   +         
Sbjct: 302 GVSPFWQQVAKGFIIIAA 319


>gi|153011379|ref|YP_001372593.1| monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC
           49188]
 gi|151563267|gb|ABS16764.1| Monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC
           49188]
          Length = 343

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 48/320 (15%), Positives = 92/320 (28%), Gaps = 14/320 (4%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            + +    LL +V  +++            I  +    ++  +FA G+ +V+ S G+   
Sbjct: 27  RRPEMFTLLLIIVTCVVVIAANPDFLQMSNIVDILRASVVRGLFAMGVLVVLASGGI--- 83

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
             V   AI A+    L          +     +I  A G              L   +LI
Sbjct: 84  -DVSFTAIAAFVMYALTMLVTNWFPEMPMTIILILAAIGGAAFGALNGLLVQKLQAPSLI 142

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           ++   Q ++  +     G A                            V+    +  V  
Sbjct: 143 VTIGTQYVIRSFLLTFVGTALFMNIPVAMDAFGKTSLFTHHASNGVVSVLPATVLVLVAA 202

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +            RT +  A   +  N      L   +   ++  FA +    G+AG  
Sbjct: 203 ALVTWFIL-----ERTLMGRAIFAVGGNPGIAERLGVNLFRVRIFVFAYAGLLAGIAGVV 257

Query: 249 FAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNF 303
             +S    +P      E  I+ ++V     I GG  S+        ++  V  +   +  
Sbjct: 258 HVSSNRLANPFDLAGMELEIIAAVVLGGARITGGSGSVIGTLLGVLLITIVSNVLIFVGI 317

Query: 304 YYFNSLLKFDCSFNMRHTTL 323
                L        +  T  
Sbjct: 318 PSTLQLAIVGIFILLAGTIF 337


>gi|315650557|ref|ZP_07903623.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Eubacterium saburreum DSM 3986]
 gi|315487212|gb|EFU77528.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Eubacterium saburreum DSM 3986]
          Length = 324

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/320 (10%), Positives = 86/320 (26%), Gaps = 16/320 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            +    ++    V+  ++  L            ++          A G++ V+   G + 
Sbjct: 7   FSNQQAVVIAALVLICIVFSLLTNKFLQPTTFTNISKSAYYVAFMAIGVTFVIA-TGGID 65

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+        A        +      +++ + A+      +   L S      ++A    
Sbjct: 66  LSIGTVAICSALIGGTFMEKGTPMFIVILIMLAVGGIFGLINGILVSHFELPAFIATLGT 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           +M       ++      +   G         +    +             +         
Sbjct: 126 MMVSRGLGSIVSQTKTISFPQGNSAGAWFREIFMVTKD----------GGVLPKNFPTGF 175

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +   +  + + L +T +     +I  N++A       +   +  A+  S  F  +AG 
Sbjct: 176 ILLAVCAVVMAIVLNKTRLGRYILSIGSNKEATRLSGIDVKKYETLAYVFSGLFAALAGL 235

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
            + A      P+     E   +  +VI      GG+ S+        I+  +      + 
Sbjct: 236 AYVAVFSTAQPNTGNGFELDAIAGVVIGGTSLSGGVGSIVGTIIGVFIMTVLKIGFPYIG 295

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
                 L             
Sbjct: 296 VQSHYQLFITGIILVFAVYM 315


>gi|294633205|ref|ZP_06711764.1| branched-chain amino acid ABC transporter, permease [Streptomyces
           sp. e14]
 gi|292830986|gb|EFF89336.1| branched-chain amino acid ABC transporter, permease [Streptomyces
           sp. e14]
          Length = 290

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 84/287 (29%), Gaps = 5/287 (1%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +Y + A GLS++ G + +L+       + GAY      S +           
Sbjct: 4   LTGLGLGALYFLVASGLSLIFGLMDVLNFAHGALMSAGAYGTWWAASGHLPGAGSGGFGF 63

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +       +  L ++             +    +  ++    +      +  A      
Sbjct: 64  VLAVVFGTAVGTLAAVLLEL----AVIRPLYTRPREQILATVGVGLAVPALLSAIWGADA 119

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                       F        +    ++     +  ++ L+L RT      R   +++  
Sbjct: 120 RPFPGPEALSGTFGLLGAEVPLNRLVLIAAAVVVLVALKLFLGRTRHGLVVRAGVEDRAM 179

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   +  A    FA+  A   + GA        + P+    S  I    +V++GGM 
Sbjct: 180 VTALGIDVRKAFTLVFAIGGAAAALGGAIGGLYFGSVDPEQ-GTSLLIFAFVVVVMGGMG 238

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           SL+  A A+  +  V +            L        +       +
Sbjct: 239 SLTGAALASVAVGLVQQFANYYTSAGLGDLAVVVLLAALLLVRPRGL 285


>gi|312199489|ref|YP_004019550.1| inner-membrane translocator [Frankia sp. EuI1c]
 gi|311230825|gb|ADP83680.1| inner-membrane translocator [Frankia sp. EuI1c]
          Length = 370

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 51/316 (16%), Positives = 95/316 (30%), Gaps = 28/316 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +    + L A+++ +          + +    +     +  + A GL IV  S G++ L 
Sbjct: 35  RNASAVYLFALLFVVFAVWEPDTFLTLQTWRLLLDSQAVTGLVAVGL-IVSLSAGVIDLA 93

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 IG        +R GL I L I +S +   A G+++ L  ++ R   +       
Sbjct: 94  IGSEAGIGGILVAWFLARQGLPIPLAILLSLLAGAAVGVVLTLLIVRARVPSMIGT---- 149

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                +ILI      +G   I                     F          + Y +  
Sbjct: 150 -LAISSILIAMIDWISGSQQILDLGP---------------SFQKIGTDELFGVTYPVYV 193

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  +S  +  +L RTA+         N +A            L A       + MAG   
Sbjct: 194 LAAVSLIVWYFLDRTAVGRRIYATGGNVEAARLAGVRTSRMILLATVTCGVIVAMAGVLA 253

Query: 250 AASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNF 303
           ++            S  +   +   L      GG  +++    A A+L   V+       
Sbjct: 254 SSQLAT-GDPTITQSYLLPAFAAAFLGSTQFRGGRFNVAGTLMAVAVLAVGVKGLQLGGA 312

Query: 304 YYFNSLLKFDCSFNMR 319
             +   L    +    
Sbjct: 313 PIWLPDLFDGVALIAA 328


>gi|326316474|ref|YP_004234146.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323373310|gb|ADX45579.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 327

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/296 (12%), Positives = 85/296 (28%), Gaps = 11/296 (3%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
           A  +     ++ +Q+    +   G + V+   G + L+     A+      +        
Sbjct: 31  AFFTVGNGMTVALQVTSIALLGVGATFVI-IAGGIDLSVGSVLALAGVLAALAVKAGMPV 89

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
             + + +  +   ACG I GL   + +         +M       L           G  
Sbjct: 90  P-IGMALGILAGAACGAINGLLVTQAKLPPFIATLGMMLVARGVALQITGARAVSGLGES 148

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
             +        +  +        +F      +  +++     S  +     RT +     
Sbjct: 149 FGELGNGSLFRIERIDAQGFPDVTFPGIPYPVVLMVVIAVAASILL----TRTRLGRHIH 204

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +  N +A       +    L  + VS A  G+ G    +      P+     E   + +
Sbjct: 205 AVGSNAEAARLSGVKVNAVVLFTYVVSGALAGLTGCVLMSRLVTAQPNEGVMYELDAIAA 264

Query: 272 IVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            VI     +GG+ ++S  A  + ++  +           F   +       +    
Sbjct: 265 SVIGGTSLIGGVGTISGTAIGSFVIGILRNGLNMNGVSAFTQQIIIGLVILLTVWI 320


>gi|196231024|ref|ZP_03129884.1| Monosaccharide-transporting ATPase [Chthoniobacter flavus Ellin428]
 gi|196224854|gb|EDY19364.1| Monosaccharide-transporting ATPase [Chthoniobacter flavus Ellin428]
          Length = 338

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 87/297 (29%), Gaps = 25/297 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L +++ IL L+ V              +      +        + A  ++ ++   G + 
Sbjct: 18  LFRHETILLLVLVAEWFYFNSVGRRFGTLDNTFEIMRHSAEIGLLALVMTPII-LTGGID 76

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+      + A  +  L    G+S+ +    + +I    G +  +   + R   L     
Sbjct: 77  LSVGSLLGLCAILFGKLWRDVGMSLPVAAVCTLLIGALAGGLNAVLIARLRLPALI---- 132

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                          +T G   ++                    F +    +   +   +
Sbjct: 133 ---------------VTLGTYSLFRGLAEAITRGVDTFTNFPDSFLALGQQHFAGLPTQV 177

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                ++ +I L + RT    + R I  + +        +      A+ ++     +A  
Sbjct: 178 WFFLVVTIAIWLLVHRTTFGRSLRAIGFSPEGARYAGLPVERRIAQAYILAGVVSALAAI 237

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCC 299
            + A   +   D     E   + ++V     I GG+ ++       A +  +     
Sbjct: 238 IYTARLGQAKADAGTGYELFAITAVVLGGTSIFGGIGTVHGTLFGVAAIAVLDNGLV 294


>gi|47568120|ref|ZP_00238825.1| ribose ABC transporter, permease protein [Bacillus cereus G9241]
 gi|47555274|gb|EAL13620.1| ribose ABC transporter, permease protein [Bacillus cereus G9241]
          Length = 311

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 96/312 (30%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLALIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +     +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMAV--GLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|317048700|ref|YP_004116348.1| inner-membrane translocator [Pantoea sp. At-9b]
 gi|316950317|gb|ADU69792.1| inner-membrane translocator [Pantoea sp. At-9b]
          Length = 343

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/319 (11%), Positives = 92/319 (28%), Gaps = 26/319 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + ++ +   L+  +     + Q ++ +      + +Q+ I  + A G++ V+ + G + L
Sbjct: 31  IFVVMLGIALIFEIAGWYVRDQSFLMNTNRLVLIVLQVAIIGIIAVGVTQVIITTG-IDL 89

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+ A     L         +   +  + +    +      L        + T  
Sbjct: 90  SSGSVIALTAVVAASLAQTSDSLTPMYPSLVNLPAAIPIVAGIGVGLLCGLVNGVLITRT 149

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
               F   L                + + FL     S+ +                  ++
Sbjct: 150 GIPPFIATLGMMVSARGLAQYYTQGNPISFLSDGFTSIGQGAMP--------------VI 195

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
               ++    + L+ T        I  N  +       +    +  + ++ A  G+AG  
Sbjct: 196 IFLVVAFLFHIALKHTRYGKYVYAIGGNMTSAKVSGINVNKYLIIVYTIAGALSGLAGVV 255

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            AA        M    E   + + VI     +GG+  ++       IL  +      +  
Sbjct: 256 LAARVSSGQSSMGLAYELDAIAAAVIGGSSLMGGVGRITGTLIGAVILGLIKSGFTFVGV 315

Query: 304 YYFNSLLKFDCSFNMRHTT 322
             +   +          + 
Sbjct: 316 DAYVQDIIKGIIIVAAVSI 334


>gi|228989801|ref|ZP_04149781.1| Ribose ABC transporter [Bacillus pseudomycoides DSM 12442]
 gi|228995990|ref|ZP_04155646.1| Ribose ABC transporter [Bacillus mycoides Rock3-17]
 gi|229003607|ref|ZP_04161423.1| Ribose ABC transporter [Bacillus mycoides Rock1-4]
 gi|228757649|gb|EEM06878.1| Ribose ABC transporter [Bacillus mycoides Rock1-4]
 gi|228763763|gb|EEM12654.1| Ribose ABC transporter [Bacillus mycoides Rock3-17]
 gi|228769948|gb|EEM18531.1| Ribose ABC transporter [Bacillus pseudomycoides DSM 12442]
          Length = 311

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 97/312 (31%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLALIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +     +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMAV--GLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           ++   L++T        I  N++A       +   K+  + +S     +AG    +  D 
Sbjct: 174 ALYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGSSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|182415135|ref|YP_001820201.1| monosaccharide-transporting ATPase [Opitutus terrae PB90-1]
 gi|177842349|gb|ACB76601.1| Monosaccharide-transporting ATPase [Opitutus terrae PB90-1]
          Length = 327

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 41/316 (12%), Positives = 84/316 (26%), Gaps = 26/316 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
                 L  V  L   L      S      +  Q  +  + A G+++++   G + L+  
Sbjct: 22  AGPFLGLVAVVVLFAALRFETFASLDNAAIIFQQTAVIGVAALGMTLII-ISGGIDLSVG 80

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
              A+G     +L      ++   +    + +   G    L +                 
Sbjct: 81  SIIALGTVVIALLLQSGWPALAAALAGIGVSALCGGFSGLLITR---------------- 124

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
               + +    +T G  G          G         +      +     +   +  M 
Sbjct: 125 ----LHLLPFVVTLGMMGALRGAAKGLAGEQPIYPDETWLGGLMRLGERGSLPAGVWLMI 180

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
             S  + L LR+T        +  ++         +   KL  + +  AF G+A     A
Sbjct: 181 GFSVFVALTLRQTRFGRHVFAVGSSELTARLCGVPVERVKLLVYVLGGAFAGIAAVLQFA 240

Query: 252 SRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                 P      E  ++ ++VI      GG   +        I+  V   C  +    +
Sbjct: 241 YLTGGDPTTAVGLELNVIAAVVIGGASLNGGQGGVVGTLVGALIMSVVANGCTKLGLPNW 300

Query: 307 NSLLKFDCSFNMRHTT 322
              +            
Sbjct: 301 VQEIVTGAIIVAAVLL 316


>gi|121610233|ref|YP_998040.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121554873|gb|ABM59022.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 706

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/316 (11%), Positives = 101/316 (31%), Gaps = 21/316 (6%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
           + I  L+ V   ++    +    +   + +   Q   + +    + IVV   G + L+  
Sbjct: 31  NAIALLVMVCVVVVFGQLIPEFFTAGNLQTTSRQFGEFALVCLAMMIVVIVGG-IDLSVG 89

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
             +A+G +  + L +   L +  +IP+  ++  A G++ G+     R        + +  
Sbjct: 90  SNFALGNFLTLALLNLANLPLPAVIPIVMLVCAAVGLVNGVLIGYLRLRAFLTTLVTLII 149

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +   +                   L +             +    + +   + +  + + 
Sbjct: 150 VRAIV---------------DMLLLRYAQDMSVGFFESDLWDLMGLGHIAGLPFSFVVLA 194

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            ++    + L R+        I  ++++  ++   +      A+ +S    GM G  +AA
Sbjct: 195 AVAVVGHIALTRSRPGWRAMAIGGSRRSAHNIGLPVRATVCGAYVISGMLCGMGGILYAA 254

Query: 252 SRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                  D     E   + ++V     + GG  S+ K       ++ +      +     
Sbjct: 255 RLSGAGTDTGMGLEISALTAVVLGGNSLGGGRGSVVKALIGAVTVLILTNGVLRIGLNSG 314

Query: 307 NSLLKFDCSFNMRHTT 322
           +  +    +       
Sbjct: 315 SGPMVLGLTLLFAVFI 330


>gi|84503098|ref|ZP_01001194.1| hypothetical protein OB2597_01457 [Oceanicola batsensis HTCC2597]
 gi|84388642|gb|EAQ01514.1| hypothetical protein OB2597_01457 [Oceanicola batsensis HTCC2597]
          Length = 297

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 98/292 (33%), Gaps = 16/292 (5%)

Query: 55  GLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
           GLSI  G++G++++       IGAY+ VI G    ++++L +P++ ++S A G+ +    
Sbjct: 21  GLSITYGAMGVINMAHGELVMIGAYTAVISGIYLNINLFLALPLAFLVSAAVGLALEKLV 80

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF-FRFP 173
           ++     +    L    +   +    +            + L      +         F 
Sbjct: 81  IRRLYGRIIDTLLATWGVAIVLQQLIRLEFGLSFFGIHIEGLGPGLQNMNVPSFLTQPFE 140

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
              +  + +  +++L    L+      + RT++    R I  N +   +    +      
Sbjct: 141 IGGIPIQPYRSFIILVTVLLTLLTWFLMYRTSMGTQVRAIMRNPQIAAACGIDVKRVSAF 200

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            FA  S   G+AG   A  +  +         +  ++ +V                +   
Sbjct: 201 TFAYGSGLAGIAGVLLAGFKTVMPDMGASTVVDGFLVVVVG--------------GVGSL 246

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           +  +         N +     +  +    +  +    +IL R   L   ++ 
Sbjct: 247 LGTVLASALLGQINGIFAILTNDILARAVVFGVV-IAIILWRPRGLFAFKSR 297


>gi|148255808|ref|YP_001240393.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. BTAi1]
 gi|146407981|gb|ABQ36487.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 288

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 89/287 (31%), Gaps = 16/287 (5%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
             +   I    +   GL+I+ G + +++L       +GAY+ VI  +        ++ V+
Sbjct: 9   LDVLNGISSLFLLCLGLAIIFGMMKIINLAHGEFIMLGAYATVISANAGVNIWIAMLIVA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +  G  G+++    ++F    L  + L                      I       + 
Sbjct: 69  PLFVGIVGLVIERCLIRFLYGRLVDSMLA--------------TWGLSLLIIGIITTIYG 114

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T          F         +  ++ L    + A I   +R T      R    N   
Sbjct: 115 NTQQGVPTPLGGFSIGSYQSSYYTLFLALMAAVMMAIIYGVMRYTRFGLVARATMQNPAM 174

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L        +S FA+ +A  G+AG   A         +   +        V+ GG  
Sbjct: 175 AATLGVNPARVYMSTFALGAAVTGLAGGLLAPVSGI--TPVMGGAYVAKAFMTVVGGGAA 232

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            LS    A ++   V ++        +  ++ F  +  +       I
Sbjct: 233 ILSGTLSAASLFGSVNQIGAYFTTPVYGEVIVFTTAIVLIRLLPQGI 279


>gi|238794637|ref|ZP_04638243.1| Monosaccharide-transporting ATPase [Yersinia intermedia ATCC 29909]
 gi|238726026|gb|EEQ17574.1| Monosaccharide-transporting ATPase [Yersinia intermedia ATCC 29909]
          Length = 310

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 44/294 (14%), Positives = 88/294 (29%), Gaps = 18/294 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + ++  + L +      +   +  +     I  + A GL  VV   G + ++     AI 
Sbjct: 1   MVLLLVIGLSVKSPEFLTLGNLTDVATSYAILGILACGL-FVVLIAGGIDISFPAVTAIA 59

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            Y        +G S  L   ++  +    G+I GL     +      A +I         
Sbjct: 60  QYVMASWVITHGGSFALAFVLAMSVGLVLGLINGLLVYWLKVP----AIIITIATLNLFY 115

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                 TNG       D                   +    Y+  +   L  +       
Sbjct: 116 GLLVYFTNGTWLYGFPDWFMTGINWFS--------FTGSDGYDYGLTLPLFCLAATIIFT 167

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            + +  T +      +  N+ A   L   I+   L  +       G+A    A     ++
Sbjct: 168 GVLMNYTRLGRQIFAMGSNKDAASRLGINILRLHLYVYGYMGMLAGVAAVVQAQISQSVA 227

Query: 258 PDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           P+     E  ++ ++V     + GG  SLS       +L  +      ++   +
Sbjct: 228 PNSLMGFELTVLAAVVLGGTSMTGGRGSLSGTVLGVMLLAFLQNGLTLLSVSSY 281


>gi|171319123|ref|ZP_02908245.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MEX-5]
 gi|171095681|gb|EDT40639.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MEX-5]
          Length = 339

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 90/313 (28%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L         L         +     ++  QI   V+ + G++ V+   G + L+     
Sbjct: 38  LAGALAAMIALFSALSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAG-IDLSVGSVL 96

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +   ++         +   ++ A G + G  ++ +R       +L + E  +
Sbjct: 97  ALAASMVSVAALKWQWGPLPAALIGIAVATATGSLTGAITVGWRIPSFI-VSLGVLEAAR 155

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  +         G                      F        + +    L    + 
Sbjct: 156 GVAYQLTNSRTAYIGDA--------------------FDFLSNPIALGISPAFLIAVAVM 195

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    L RT        I  N++A           K+  FA+  A  G+A  F  +  +
Sbjct: 196 IAAQFVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKILVFALMGALAGLASLFQISRLE 255

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +      +        
Sbjct: 256 AADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGANEPTKR 315

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 316 IITGAVIVVAVVL 328


>gi|30260819|ref|NP_843196.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           Ames]
 gi|47525949|ref|YP_017298.1| ribose ABC transporter permease [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49183660|ref|YP_026912.1| ribose ABC transporter permease [Bacillus anthracis str. Sterne]
 gi|165872712|ref|ZP_02217341.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           A0488]
 gi|167640936|ref|ZP_02399194.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           A0193]
 gi|170689048|ref|ZP_02880248.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           A0465]
 gi|170708509|ref|ZP_02898951.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           A0389]
 gi|177652838|ref|ZP_02935211.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           A0174]
 gi|190568593|ref|ZP_03021499.1| ribose ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|227816461|ref|YP_002816470.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           CDC 684]
 gi|229602588|ref|YP_002865264.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           A0248]
 gi|254684254|ref|ZP_05148114.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           CNEVA-9066]
 gi|254722058|ref|ZP_05183847.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           A1055]
 gi|254738719|ref|ZP_05196422.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           Western North America USA6153]
 gi|254754944|ref|ZP_05206978.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           Vollum]
 gi|254762325|ref|ZP_05214169.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           Australia 94]
 gi|30254268|gb|AAP24682.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           Ames]
 gi|47501097|gb|AAT29773.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49177587|gb|AAT52963.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           Sterne]
 gi|164711573|gb|EDR17121.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           A0488]
 gi|167511156|gb|EDR86544.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           A0193]
 gi|170126630|gb|EDS95515.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           A0389]
 gi|170667033|gb|EDT17796.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           A0465]
 gi|172081872|gb|EDT66941.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           A0174]
 gi|190560387|gb|EDV14366.1| ribose ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|227007830|gb|ACP17573.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           CDC 684]
 gi|229266996|gb|ACQ48633.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           A0248]
          Length = 311

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 95/312 (30%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLALIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +     +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMAV--GLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S      AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTKIKVMIYGLSGILAAFAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|222530228|ref|YP_002574110.1| monosaccharide-transporting ATPase [Caldicellulosiruptor bescii DSM
           6725]
 gi|222457075|gb|ACM61337.1| Monosaccharide-transporting ATPase [Caldicellulosiruptor bescii DSM
           6725]
          Length = 328

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 95/299 (31%), Gaps = 24/299 (8%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                 + + + +  + +    + A G+++V+   G + L+      + A     L   Y
Sbjct: 40  LSPNFLTAENLITTALGLAADGILAIGMTVVL-VSGGVDLSVGSVLGLSAVIAGGLYLSY 98

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           G++IW+   ++ +I    G+  G    +     L +   +M                   
Sbjct: 99  GVNIWIGSLIALVICALIGLFNGYFIARIGIPPLIVTLAMMGIA---------------- 142

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
               A  +   G+ +        F        + + + +L    L       +R++A   
Sbjct: 143 --RGAAYVLTQGSPLSLYGNLKGFDFLGQGKVLGIPFFILFFIILIILFDFLMRKSAPFR 200

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               +  N+ A       +   K+S + + S   G+AG F  +     +P     SE   
Sbjct: 201 LVYYVGSNENAAKLSGINVPKVKISVYVLMSVLAGIAGIFTLSRFSVAAPTAGNGSELNA 260

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + VI      GG  ++      T ++  +      +N   +   L          T 
Sbjct: 261 ISACVIGGASLAGGEGTVLGAILGTILVGIINNALVLLNVSVYWQNLVSGVILIAAVTI 319


>gi|126666424|ref|ZP_01737403.1| inner-membrane translocator [Marinobacter sp. ELB17]
 gi|126629225|gb|EAZ99843.1| inner-membrane translocator [Marinobacter sp. ELB17]
          Length = 298

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 94/290 (32%), Gaps = 19/290 (6%)

Query: 51  MFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIM 110
           + + GL+++ G + +L+++    YA+GAYS   +   Y  +  +      ++ GA     
Sbjct: 20  IISAGLTLIYGVMRILNMSHGSFYALGAYSGASMVGWYFSTGSVPWLSFVVLIGAALAAG 79

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
               L      L         +   +      I      +      YF       L R  
Sbjct: 80  VTVGLLVERGLLRFMYGRDEVVMILVTYAVLLIMEDAIKLIWGVEPYFAYQPYTMLGRTK 139

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
               +F  Y+   + ++     +  ++   L RT      R I  +++   +L   +   
Sbjct: 140 FMGLTFANYD---FMLIGVSILIGLALWYGLNRTRNGKLLRVIIHDREIAGALGINVSKI 196

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
               F + +    +AGA  A     +          ++  ++V++GG+ S+S       I
Sbjct: 197 FTITFVIGAGIGALAGALTAPGLSVV--PGMGIEVIVLAFAVVVIGGLGSISGALVGALI 254

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +         +              +      ++   + LV+  R   L 
Sbjct: 255 VGMARATAVHL--------------YPEVELFVIYAVMGLVLAFRPQGLF 290


>gi|227819733|ref|YP_002823704.1| sugar ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227338732|gb|ACP22951.1| probable sugar ABC transporter, permease protein [Sinorhizobium
           fredii NGR234]
          Length = 336

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 83/298 (27%), Gaps = 17/298 (5%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               S   + ++  +     + A G + V+ S G L L+     A  A   ++  +   +
Sbjct: 43  PNFISINNLANVATRSAFIAIIAVGATFVI-SSGDLDLSVGAMVAFIASLMILFMNSGVI 101

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           +  +L+ V+A++       +   +         I   I +     I        +    I
Sbjct: 102 ADPVLMLVAAILFTVVAGALCGLTNGLITTAGKIEPFIATLGTMGIYRGLTTWLSQGGAI 161

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            + +               F  P             ++ +  ++A     L RT      
Sbjct: 162 TLKEPQLQEIYRPAYFGMIFGVPVP-----------IIVILSVTAVAAFILYRTRYGRHV 210

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N+         +   +  AF +    +  A   +       S       E   + 
Sbjct: 211 VAVGSNRDVARYSGIFVNGVRTVAFVIQGLCVAAAVLLYVPRLGSTSATTGILWELQAIT 270

Query: 271 SIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           ++V+      GG   +        IL  V  +    NF     +     +  +    +
Sbjct: 271 AVVVGGTALKGGAGRVWGTICGAFILELVGNIMLLSNFISEYLIGAIQGAIIIIAMLV 328


>gi|167635187|ref|ZP_02393503.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           A0442]
 gi|254742069|ref|ZP_05199756.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           Kruger B]
 gi|167529446|gb|EDR92197.1| ribose ABC transporter, permease protein [Bacillus anthracis str.
           A0442]
          Length = 311

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 95/312 (30%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLALIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +     +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMAV--GLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +S      AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTKIKVMIYGLSGILAAFAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + +IV     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAIVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|146313704|ref|YP_001178778.1| inner-membrane translocator [Enterobacter sp. 638]
 gi|145320580|gb|ABP62727.1| rhamnose ABC transporter membrane protein [Enterobacter sp. 638]
          Length = 334

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/320 (13%), Positives = 92/320 (28%), Gaps = 23/320 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L   + +L  + ++  L +   + +  +   +  M     I ++ A G  +V+     + 
Sbjct: 6   LKHREALLGAVIMLMILAIGSRVPSFIAPGNLVEMFNDTSILIILALGQMMVL-LTKGID 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+      ++   Y       + + A   G     +    +   G    + TL
Sbjct: 65  LSMAANLALTGMIVALINFHYPDVPVWALLILATGLGLLMGAINGLLVWKLGIPAIVVTL 124

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I++ I+                  L   G  V S      F +      + +  + 
Sbjct: 125 GTMSIYRGIIF-----------------LLSGGGWVNSNQMGTDFLALPRTAILGLPVLS 167

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                    +  +LR +    A  T   N  A +         +  +F +S A  G  G 
Sbjct: 168 WCAVAALLLVGYFLRYSRTGRALYTAGGNATAAYYTGINAGKMQFVSFCLSGALAGFCGY 227

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
            + +       D+    E  +V + VI     +GG   +         L  +      + 
Sbjct: 228 LWISRFAVAYVDVANGFELQVVAACVIGGISTMGGTGRVLGCLFGALFLGVINNALPVIG 287

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F  +        +    
Sbjct: 288 VSPFWQMAISGTVIVIAVLL 307


>gi|221068861|ref|ZP_03544966.1| inner-membrane translocator [Comamonas testosteroni KF-1]
 gi|220713884|gb|EED69252.1| inner-membrane translocator [Comamonas testosteroni KF-1]
          Length = 285

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 93/297 (31%), Gaps = 26/297 (8%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           ++  + A GLS+ +G +  ++L       +G Y+  +L +  G   +  +  S + +   
Sbjct: 13  MLLFLIAVGLSVTMGLMKFVNLAHGAFAMVGGYAAAVLMNSMGWGFFAALVASFIAAAVV 72

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G ++ L   +       +  +++S     + I       G +                  
Sbjct: 73  GGVLELSLYRRLYRSHPLDQVLLSIGLVFVSIASFTYFFGPSMQPFQLP----------E 122

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
               +   + +    +  +++     +   ++L L +T      R   DNQ+    +   
Sbjct: 123 ALTGQISVAGMEMGRYRLFLIASGVVVLVGLLLLLNKTRFGAMVRAAVDNQRVASGVGIP 182

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +       F +             +         F     ++ + +V +GG  ++     
Sbjct: 183 VQKLFFFTFVMGCGL--AGLGGALSLGVLGLEPTFPLKYLVLFLMVVCVGGAGTIIGPFV 240

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
           A  ++  V                            L+ + + + +L+R H L+  +
Sbjct: 241 AALVVGVVDVAGKYY--------------LPEAGAFLIYVFMVVALLVRPHGLIPRK 283


>gi|325109925|ref|YP_004270993.1| inner-membrane translocator [Planctomyces brasiliensis DSM 5305]
 gi|324970193|gb|ADY60971.1| inner-membrane translocator [Planctomyces brasiliensis DSM 5305]
          Length = 333

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 98/334 (29%), Gaps = 34/334 (10%)

Query: 10  KYDKILCLLAVVYPLLLFL-----FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
           +    L  L VV  +         F G   +      + +      + A G++ ++   G
Sbjct: 14  RLLGPLIALGVVVAVFGIADQYQEFGGKFLTFSNFQRISVNTATVAVAALGMTFII-IAG 72

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+     A+ A            S  + +    ++   CG++ G+     R     +
Sbjct: 73  GIDLSAGTGLALCATVVAYCLKA-DYSPLVSLGCGILMGCGCGLLNGVLISWLRMIPFIV 131

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
               MS          K  T                 + R        P           
Sbjct: 132 TLGTMSIYLGIAKQIAKETTVRPDRYEQVPVWMREFLSTRDSALVAGMPLG--------- 182

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +     L+  + + LR T  S     +  N+         +   K++ + ++  F+G+
Sbjct: 183 --VWVALGLAILVAIALRYTVFSRHVFALGSNEATARLCGINVTRTKIAVYTLAGFFVGI 240

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
           AG F  +     +P      E  I+ ++VI      GG  ++       AI+  +     
Sbjct: 241 AGLFQFSRLSVGNPTSGLGMELEIIAAVVIGGGSLNGGSGTVLGTLAGAAIMSVIQS--- 297

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
                      +   +   +   L  I +  V++
Sbjct: 298 --------GCTQLGINNPTQDMILGGIIIVAVLV 323


>gi|28870649|ref|NP_793268.1| sugar ABC transporter permease [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|213971330|ref|ZP_03399445.1| sugar ABC transporter, permease protein [Pseudomonas syringae pv.
           tomato T1]
 gi|301384658|ref|ZP_07233076.1| sugar ABC transporter, permease protein [Pseudomonas syringae pv.
           tomato Max13]
 gi|302059495|ref|ZP_07251036.1| sugar ABC transporter, permease protein [Pseudomonas syringae pv.
           tomato K40]
 gi|302134089|ref|ZP_07260079.1| sugar ABC transporter, permease protein [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|28853897|gb|AAO56963.1| sugar ABC transporter, permease protein [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213923868|gb|EEB57448.1| sugar ABC transporter, permease protein [Pseudomonas syringae pv.
           tomato T1]
 gi|330876721|gb|EGH10870.1| sugar ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330966083|gb|EGH66343.1| sugar ABC transporter permease [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 341

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 47/319 (14%), Positives = 95/319 (29%), Gaps = 26/319 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + L+ +   L+  LF    + Q ++ +      M +Q+ I  + A G++ V+ + G + L
Sbjct: 27  IFLVLIGIGLIFELFGWIVRDQSFLLNSQRLVLMILQVSIIGLLAIGVTQVIITTG-IDL 85

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+ A     L              S         +  LP        L +  L 
Sbjct: 86  SSGSVLALSAMIAASLAQ-----------TSDFSRAVFPSLTDLPVWIPIVVGLGVGLLA 134

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
            +     I I   P      G+ V+ R      T    +       + +        + L
Sbjct: 135 GAINGSIIAITGIPPFIATLGMMVSARGLARFYTEGQPVSMLSDSYTAIGQGAMPVIIFL 194

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +        + LR T        I  N +A  +    +    +  ++++    G+AG  
Sbjct: 195 VVA---VIFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLIIVYSIAGLLAGLAGVV 251

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            +A        M    E   + + VI      GG+  ++       IL  +      +  
Sbjct: 252 ASARAATGQAGMGMSYELDAIAAAVIGGTSLAGGVGRITGTVIGALILGVMASGFTFVGV 311

Query: 304 YYFNSLLKFDCSFNMRHTT 322
             +   +            
Sbjct: 312 DAYVQDIIKGLIIVAAVVI 330


>gi|116747762|ref|YP_844449.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
 gi|116696826|gb|ABK16014.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
          Length = 291

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 84/301 (27%), Gaps = 23/301 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   IY +   G+++++G + +++L       I  Y   +L   + +  +  +  
Sbjct: 8   LVAGILMGGIYALVGLGMTLIMGVMKIVNLAHGQLMMIAMYITFVLFDHFHIDPYFSL-- 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                    M        F   YL    L +  I     +             V      
Sbjct: 66  ------LVSMPALFLLGAFIQKYLLNPLLKVDSILPENQVLMTVGIGMILTEIVRFIFQS 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +V++   F       + +   M         L+  +  +L +T +  + R    N+ 
Sbjct: 120 DYKSVKTSYSFSTMYLGTISFNTSMVVAFCIAVLLTGGLFFFLAKTDVGKSVRATAQNKD 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +     +  +  + + +A +  AG                    +    I ILGGM
Sbjct: 180 AALLMGVNAEWITILTYGLGAALVAAAGTLLLPIYYL--FPDVGGRFTLKAFVITILGGM 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S          L     L         +  +               +   LV++     
Sbjct: 238 GSTVGAIVGGVFLGIAESLGATYISMALSDAVGL-------------VIFLLVLIFLPGG 284

Query: 339 L 339
           L
Sbjct: 285 L 285


>gi|329298326|ref|ZP_08255662.1| inner-membrane translocator [Plautia stali symbiont]
          Length = 343

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/319 (13%), Positives = 97/319 (30%), Gaps = 26/319 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + ++ +   L+  +     + Q ++ +      + +Q+ I  + A G++ V+ + G + L
Sbjct: 31  IFVVMLGIALIFEMAGWYVRDQSFLLNTNRLVLIVLQVAIIGIIAVGVTQVIITTG-IDL 89

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+ A     L                 +S     ++ LP+       + +  L 
Sbjct: 90  SSGSVIALTAVVAASLAQTSDS-----------LSPMYPSLVNLPAAIPIVAGIGVGLLC 138

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                  I     P      G+ V+ R      T  + I F     + +        + L
Sbjct: 139 GVVNGVLITKTGIPPFIATLGMMVSARGLAQYYTQGNPISFLSDGFTSIGQGAMPVIIFL 198

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +        + L+ T        I  N  +       +    +  + ++ A  G+AG  
Sbjct: 199 VVA---FLFHIALKHTRYGKFVYAIGGNMTSAKVSGINVNKYLIIVYTIAGALSGLAGVV 255

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            AA        M    E   + + VI     +GG+  ++       IL  +      +  
Sbjct: 256 LAARVSSGQSSMGMAYELDAIAAAVIGGSSLMGGVGRITGTLIGAVILGLIKSGFTFVGV 315

Query: 304 YYFNSLLKFDCSFNMRHTT 322
             +   +          + 
Sbjct: 316 DAYVQDIIKGMIIVAAVSI 334


>gi|255654368|ref|ZP_05399777.1| ribose ABC transporter, permease protein [Clostridium difficile
           QCD-23m63]
 gi|296452657|ref|ZP_06894349.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Clostridium difficile NAP08]
 gi|296880933|ref|ZP_06904880.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Clostridium difficile NAP07]
 gi|296258493|gb|EFH05396.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Clostridium difficile NAP08]
 gi|296428046|gb|EFH13946.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Clostridium difficile NAP07]
          Length = 332

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 96/280 (34%), Gaps = 26/280 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +      +  V+  +++ +      +   + ++G QI I  + A G++ V+   G + L+
Sbjct: 24  RDQGSAAVGLVIIFIIMSIASSNFLTLDNLINVGRQISINAILAVGMTFVI-ITGGIDLS 82

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+    +      Y   IWL + ++  I    G+I G      +           
Sbjct: 83  VGAVIALVGTFWATTVVNYNAPIWLGMILALAIGTILGVIKGAIISTQKLPPF------- 135

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 + +    I +G + ++   R           +    F      Y   +   ++ 
Sbjct: 136 -----IVTLAMLTIISGASFVFTGGRPI--------SVNTDAFKMLGRGYVGPIPIPVII 182

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           M  +  +    L+RT        +  N++A       +    +  +A++     +AG   
Sbjct: 183 MIIVVIAGHFLLKRTNFGRHVHAVGGNEEAARLCGVKVNKVIVKVYALAGLLTALAGIIL 242

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKI 284
           ++     SP +   +E   + ++V     ++GG  S+   
Sbjct: 243 SSRLASGSPTVGDGAELDAIAAVVLGGTNMMGGSGSIVGT 282


>gi|222082095|ref|YP_002541460.1| sugar ABC transporter [Agrobacterium radiobacter K84]
 gi|221726774|gb|ACM29863.1| sugar ABC transporter [Agrobacterium radiobacter K84]
          Length = 334

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 96/321 (29%), Gaps = 23/321 (7%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
                 + + +L  + +V      +          + ++     I ++ A    + V   
Sbjct: 1   MPRIFKRRETLLFAIIIVMIAGFAMRAAGFAEPSNLANIFNDTSILIILALAQ-MTVILT 59

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
             + L+     A    +  +L + Y     +++ ++A++ GA    +    +        
Sbjct: 60  KSIDLSVAANLAFTGMAVAMLNAAYPDLPLIVLVITAIVMGAALGAINGYLVWALEIPPI 119

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           + TL    I++ +      ++ G           FL      L+         +   + M
Sbjct: 120 VVTLGTLTIYRGMA---FVLSGGAWVNAHQFTPEFLSVPRTPLLGLPVLAWIGIAIVLMM 176

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           Y+VL              R T    +      N  A       + + +  AF +S A  G
Sbjct: 177 YFVL--------------RYTRFGRSAYASGGNPVAAVYAGIDVGWTRFLAFVLSGALAG 222

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELC 298
           + G  + +       D+    E   V + V     I GG+ S++        L  +    
Sbjct: 223 LCGYLWVSRYAVAYVDIANGFELDSVAACVIGGISIAGGVGSVAGTVLGALFLGVIKNAL 282

Query: 299 CGMNFYYFNSLLKFDCSFNMR 319
             +    F  +        + 
Sbjct: 283 PVIGISPFTQMAISGTVIILA 303


>gi|288921270|ref|ZP_06415554.1| inner-membrane translocator [Frankia sp. EUN1f]
 gi|288347360|gb|EFC81653.1| inner-membrane translocator [Frankia sp. EUN1f]
          Length = 752

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 50/301 (16%), Positives = 98/301 (32%), Gaps = 24/301 (7%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-----S 80
             L +               +    +    L I+ G  G LSL       +G+      +
Sbjct: 333 AALLMAPMTFAPADLRSAFMVPALALIFLSLVILTGYSGQLSLGVAGYAGLGSLFTLKLA 392

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
              L     +     + + A++    G+I G P+++ RG  LA+ T  +  +    + + 
Sbjct: 393 NGDLFGLPAVPGIWAMFIGAIMVAPIGLITGWPAIRRRGLVLALTTFAVGAVVSRFVFEQ 452

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
               +G                   L           + +   Y   L    L   ++  
Sbjct: 453 PDFASG-------------------LYVDPLELFGAELGDKAFYLFELFCLGLGLLVVRS 493

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L    I  A   +RD+ +   ++   +   KL AF +SSA  G+ GA    S    S D 
Sbjct: 494 LHHGRIGRALLAVRDHSEGAAAVGVDVRSLKLLAFTISSAVAGLGGALLTFSASSFSTDD 553

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F   ++++  + V++ G  S +    A   ++ +  L    +      +L     +    
Sbjct: 554 FAPMQSLLWFTAVVVFGADSAAGAIIAAGFIVAIDVLAPAGSSILAVGILALSLGWLPGG 613

Query: 321 T 321
            
Sbjct: 614 L 614



 Score = 45.2 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 78/287 (27%), Gaps = 9/287 (3%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             S     +      I  +   G+ +   + G+L+        + AY +  +   +GL I
Sbjct: 1   MTSINLALTAISLGAIAALSGIGVLVTYRTNGVLNFAQGGIATLVAYVFREMVVEWGLPI 60

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           WL   ++  +       +GL   +     LA      +E     L          AGI+ 
Sbjct: 61  WLAAVLALAVLSPG---IGLLLERLVFRPLARRRASAAESLVASLGVLVLTLGMTAGIWG 117

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                   +   +           V     +  V +        + +   +T      R 
Sbjct: 118 LGSRGDAPSIFPADTVKIGDTRVGVDALAELAMVAVF----CIVLGILGAKTKFGRQVRA 173

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           + D+++              + +A+ +   G+ G   A         +      +   ++
Sbjct: 174 VVDDRQLAELSGVPADKVAAAGWALGTTMAGLTGILLAPQFRLTPYGLT--LLVLETFAV 231

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           V+   + SL         +         +        +      N+ 
Sbjct: 232 VVAARLASLPVAVLTALGIAVAQSELKQVTLDGDAGTVLTVLQSNLF 278


>gi|297204221|ref|ZP_06921618.1| ABC transporter permease [Streptomyces sviceus ATCC 29083]
 gi|197714088|gb|EDY58122.1| ABC transporter permease [Streptomyces sviceus ATCC 29083]
          Length = 336

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 42/322 (13%), Positives = 101/322 (31%), Gaps = 29/322 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  ++D ++  L +V  LL F  +    +   +  +    L   + A  ++++V   G +
Sbjct: 7   RAIRWDTVVGALLIVVLLLSFGTVDGFGNALNLSFLIGNTLPIALIALPMTLLV-VSGEI 65

Query: 67  SLNCVIAYAI-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
            L+      + GA    +      + + + I +   +       + +  L      + I 
Sbjct: 66  DLSVASTAGLSGAVMGALWNQGLTIEVIIPICLVLGVVCGLVNGLLVTRLGLPSLAVTIG 125

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL        I++    +T         D            I     P +F+ + + +  
Sbjct: 126 TLAAYRGIAQIVLGSDAVT---------DFPTQYLDFAAGRIGDTFIPQAFLPFLVLLAI 176

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            ++ +             T    +      +++A       +   KL  F V+     + 
Sbjct: 177 AVVVLHA-----------TPFGRSVFATGASEEAARFAGIRVKRQKLILFTVTGLMASLT 225

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCC 299
           G F+A        D       + V++ V+LGG+       +L        +L  +  +  
Sbjct: 226 GIFWALHYASARYDNAT-GLELSVVAAVLLGGIDFDGGKGTLGGAIAGVFLLGALQNVMS 284

Query: 300 GMNFYYFNSLLKFDCSFNMRHT 321
             +    + ++       +   
Sbjct: 285 LQDVSAQSQIVVTGVLLVLSVL 306


>gi|161525073|ref|YP_001580085.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
 gi|189350184|ref|YP_001945812.1| branched-chain amino acid transporter permease [Burkholderia
           multivorans ATCC 17616]
 gi|160342502|gb|ABX15588.1| inner-membrane translocator [Burkholderia multivorans ATCC 17616]
 gi|189334206|dbj|BAG43276.1| branched-chain amino acid transport system permease protein
           [Burkholderia multivorans ATCC 17616]
          Length = 311

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 96/312 (30%), Gaps = 22/312 (7%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +     L+  M + GL+++    G+L+      Y +GAY    +  R G    L++   A
Sbjct: 10  NGLSYGLLLFMLSAGLTLIFSVQGVLNFAHASFYMLGAYVGYSIALRAGFWPALVLAPLA 69

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           + +        L              + +      +L+ +        G  +A  L  L 
Sbjct: 70  VGALGAACEHTLL-----------RRVQVRGHTSELLLTFGLAYLIGEGAKLAWGLAPLP 118

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             V +           +    +  +++     +  ++   LR + +    R    ++ A 
Sbjct: 119 APVPASFEGAPVTVFGLALPRYRLFMMTMSAAMLIALGALLRTSRLGLVVRAALTHRAAV 178

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +L   +       F   +A   +AG   A     +       +   +V ++V++GG+ S
Sbjct: 179 EALGYDVPRLMTLLFGAGTALAALAGVIGAPLA--VIEPALAETVGSVVFAVVVIGGLGS 236

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN---------MRHTTLMVIALFLV 331
           L     A+  +          +            +                +  + L  V
Sbjct: 237 LGGAFVASLAVGFAQTFAASSDLTLRTLAQAAGIALPDGVAAVSIAQLAPLVPYLLLVAV 296

Query: 332 ILMRSHSLLRLR 343
           ++ R   L   R
Sbjct: 297 LVARPRGLFGER 308


>gi|84684361|ref|ZP_01012262.1| ABC branched amino acid transporter family, inner membrane subunit
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84667340|gb|EAQ13809.1| ABC branched amino acid transporter family, inner membrane subunit
           [Rhodobacterales bacterium HTCC2654]
          Length = 328

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/324 (11%), Positives = 104/324 (32%), Gaps = 33/324 (10%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV----------------- 82
            +  +  ++Y + A G  ++  + G+ +    +     A + V                 
Sbjct: 13  LNGLMAGVLYALVALGFVLIFKASGIFNYAQGVMALFAALTLVGIQDGQVPFAHLINAIF 72

Query: 83  ---ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +    + +   L I ++ ++  A   I+    L+   +   I   + +      +  
Sbjct: 73  GTDVHHFGWHVPAILAILLTVVVMVAFAWIVERYILRHLVNQPGIILFMATIGLAYFMEG 132

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           +  +  G     +   L            F  F   F I  + +   ++ +  +  ++ +
Sbjct: 133 FGDMMWGSDIKKLDVGLPQGINIAIDDTTFNWFGYGFFIDNLDISATIVAVILV-VALTV 191

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           + + +    A R + D+ +A  S+  ++ F  +  ++++     +AG  + +        
Sbjct: 192 FSQYSKQGRALRAVADDHQAALSVGISLRFIWVLVWSIAGFVALVAGIMWGSKSGVQFSL 251

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                  +  + +++LGG TS+        I+    +L             +   +    
Sbjct: 252 S---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFAIGPLVGGATENWFA---- 304

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
                 +   L ++ R   L   +
Sbjct: 305 -----YVLALLFLVFRPQGLFGEK 323


>gi|330960391|gb|EGH60651.1| sugar ABC transporter permease [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 341

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 47/319 (14%), Positives = 96/319 (30%), Gaps = 26/319 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + L+ +   L+  LF    + Q ++ +      M +Q+ I  + A G++ V+ + G + L
Sbjct: 27  IFLVLIGIGLIFELFGWIVRDQSFLLNSQRLVLMILQVSIIGLLAIGVTQVIITTG-IDL 85

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+ A     L              S         +  LP        L +  L 
Sbjct: 86  SSGSVLALSAMIAASLAQ-----------TSDFSRAVFPSLTDLPVWIPIVVGLGVGLLA 134

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
            +     I I   P      G+ V+ R      T    +       + +        + L
Sbjct: 135 GAINGSIIAITGIPPFIATLGMMVSARGLARFYTEGQPVSMLSDSYTAIGQGAMPVIIFL 194

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +        + LR T        I  N +A  +    +    +  ++++    G+AG  
Sbjct: 195 VVA---VVFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLVIVYSIAGLLAGLAGVV 251

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            +A        M    E   + + VI      GG+  ++       IL  +      +  
Sbjct: 252 ASARAATGQAGMGMSYELDAIAAAVIGGTSLAGGVGRITGTVIGALILGVMASGFTFVGV 311

Query: 304 YYFNSLLKFDCSFNMRHTT 322
             +   +       +    
Sbjct: 312 DAYVQDIIKGLIIVVAVVI 330


>gi|167770317|ref|ZP_02442370.1| hypothetical protein ANACOL_01660 [Anaerotruncus colihominis DSM
           17241]
 gi|167667639|gb|EDS11769.1| hypothetical protein ANACOL_01660 [Anaerotruncus colihominis DSM
           17241]
          Length = 326

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 86/312 (27%), Gaps = 27/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             +     +++ +      +   ++++  Q  +  +   G  ++V   G + L      A
Sbjct: 8   LFILAGLIVIMAIASPYFLTADNLETVAKQTAVIGVLTIG-ELLVIITGGIDLTVGAVLA 66

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                  ++         ++  ++A+  GA    +    +        IATL M+ + + 
Sbjct: 67  FSMVISALMLKAGV--PLVVCILAALAIGAAVGYLNGFIVTKMKLPPFIATLGMTGVLRG 124

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             +                        +                 +F+   +L +  L+ 
Sbjct: 125 AALIITD-------------------GLPVSSLPESINWFGNGTVLFISVPILILAVLAI 165

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              + L +T        +  N +A       +       + +S     +AG         
Sbjct: 166 IFQIVLSKTIFGRQIYALGSNTEATRLAGINVGSRTRCIYLLSGMLAAVAGILLMGRLSA 225

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E+  + + VI     LGG+ ++        I+  +      ++   F    
Sbjct: 226 AQPTAATGYESNAIAASVIGGASMLGGVGTVWGAIVGAFIMSILTNGFTLLHVNTFFQQS 285

Query: 311 KFDCSFNMRHTT 322
                  M    
Sbjct: 286 AIGFILIMAVYL 297


>gi|56420414|ref|YP_147732.1| D-xylose ABC transporter permease [Geobacillus kaustophilus HTA426]
 gi|56380256|dbj|BAD76164.1| D-xylose ABC transporter (permease) [Geobacillus kaustophilus
           HTA426]
          Length = 399

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/356 (12%), Positives = 100/356 (28%), Gaps = 47/356 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  L  +  +   L  G   S + + ++ +Q+ +  + A G+++V+   G + L+
Sbjct: 33  RSYTLIIALVFIAVIFSVLTDGEFVSSRNLSNLFMQMSVISILAIGMTLVI-IAGHIDLS 91

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA------ 123
                 +      IL   YG     +I V+ +     G+  G                  
Sbjct: 92  VGSVVGLTGGIAAILQVWYGWGTVSVIVVAIVAGVLIGLWQGWWVAYRGVPAFIVTLGGM 151

Query: 124 -------------------------------IATLIMSEIFQNILIKWKPITNGKAGIYV 152
                                             +       +I++ +  +   +     
Sbjct: 152 LVFRGILIGISNGETVAPLDNSFEAIGNSYLPYVIGYILAAVSIILLFLSLGRNRKKRKQ 211

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL----LGMCFLSASIILWLRRTAISN 208
                            +      ++Y +  YY +    L +  L+   +    +T    
Sbjct: 212 LGLTLNSKINDYGKTAVYSLCIFVLVYMLNRYYGVPIPMLIVVLLALVFVFIAVKTPFGR 271

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N +A       I    L+ F +  A   +AG    +  +  +    +  E   
Sbjct: 272 YIYAIGGNIEAAALSGINIKRVVLAVFILMGALSAVAGIILTSRLNAATVSAGEMYELDA 331

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           + + VI     +GG  ++        I+  +      MN   F   +       + 
Sbjct: 332 IAACVIGGTSLMGGRGNIVGAIIGALIMASIDNGMSMMNIETFWQYIVKGLILIVA 387


>gi|300313727|ref|YP_003777819.1| sugar ABC transporter permease [Herbaspirillum seropedicae SmR1]
 gi|300076512|gb|ADJ65911.1| ABC-type sugar transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 352

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 96/296 (32%), Gaps = 23/296 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             + + +L LL VV  LL+ +      S + +D++     I +M A    +V+     + 
Sbjct: 24  WQRREPLLALLTVVLILLVGVRAPVFLSAQSMDNLLTDSAITIMLALAQMLVI-LTRGID 82

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+      +L   +      +  + A++ G    ++    + +      + TL
Sbjct: 83  LSVASNLALSGMMSALLAMHFPALPVGVFILMAVLIGLMLGLLNGWLIGYLELPPIVVTL 142

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               +++ ++                      G  V S      F +  +     + +++
Sbjct: 143 GSMSVYRGMVFVLSG-----------------GAWVSSRNMPADFIAFPLARLGGLTHLV 185

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                   +I    R T        I ++  A   +        L  + +S A  G+AG 
Sbjct: 186 WLGALAVVAIWFLARHTRFGRDLYAIGNDPAAAAYVGIASRGRLLWTYGLSGAMAGLAGY 245

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELC 298
            + A       ++    E  ++ + V     I GG+  +S        L  +    
Sbjct: 246 LWVARYAVAYTEIAYGFELTVIAACVIGGVSIAGGVGQVSGAVLGALFLSVINNAL 301


>gi|302562485|ref|ZP_07314827.1| ribose transport system permease RbsC [Streptomyces griseoflavus
           Tu4000]
 gi|302480103|gb|EFL43196.1| ribose transport system permease RbsC [Streptomyces griseoflavus
           Tu4000]
          Length = 320

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/276 (13%), Positives = 84/276 (30%), Gaps = 31/276 (11%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                 S +   +  +Q+   ++ A G+++V+G+ G + L+     A+ A    +     
Sbjct: 39  ITPHFLSAENFRTQAVQVAPVIIVALGMALVIGTEG-VDLSVGAVMALAASVTALYLGYG 97

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            L   L++ + A   G     +                +    I   +L + + + N   
Sbjct: 98  LLPALLVVALFAAGVGLANGALVAFVGVQPIVATLALMVGGRGIALVLLPQLEDLRN--- 154

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                                    S      + + Y++L    L+  +   +RRT    
Sbjct: 155 ---------------------PSLASLGSGDVLGVPYLILIAAGLALLVAFVVRRTTFGR 193

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I D++ A       +    +  + V +    +AG    A      P        + 
Sbjct: 194 QLLAIGDSRPAAQLAGLPVRRVLIVVYVVCALLAAVAGVLATARLQASDPTSLGNLMELS 253

Query: 269 VISIVIL------GGMTSLSKIAKATAILIGVVELC 298
            I+ V++      GG  +++       ++  +    
Sbjct: 254 AITAVVVGGTPLTGGRVNIAGTVAGAVLIQLLTATL 289


>gi|253581905|ref|ZP_04859129.1| galactoside transport system permease mglC [Fusobacterium varium
           ATCC 27725]
 gi|251836254|gb|EES64791.1| galactoside transport system permease mglC [Fusobacterium varium
           ATCC 27725]
          Length = 339

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/310 (10%), Positives = 88/310 (28%), Gaps = 8/310 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+  +  +L+     +  S +   ++  Q  +  + A G++ ++ + G   L+     
Sbjct: 21  LYLVLFLMLVLIIAKEPSFLSIRNFKNILTQSSVRAIIALGVAGLIVTQG-TDLSVGRQV 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A     L         +   +         +I+ +  +        I   +    F 
Sbjct: 80  GFSAVISATLLQATTNVNKVFPNLGEFPVIGAIIIVMIVGMVIGSINGIIVAKLNVHPFI 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L     +    +  Y       +    +S   F +       + +    +   +    
Sbjct: 140 ATLGMMTIVYGINSLYYDYVGASPISGFSKSYSSFAQGYIGTPSFNMSYLIIYAAVATAI 199

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I+    +T        +  N +A       + +  +  +A+S  +    G   A    
Sbjct: 200 MWILWN--KTKFGKNVFAVGGNPEAAKVSGVNVAWTLVKIYALSGMYYAFGGLLEAGRIG 257

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + + VI      GG+  +S +     IL  +      +    +   
Sbjct: 258 SATNNLGNMYEMDAIAACVIGGVSFYGGVGKISGVITGVIILTVINYGLTYVGVSPYWQY 317

Query: 310 LKFDCSFNMR 319
           +         
Sbjct: 318 IIKGMIIVAA 327


>gi|167771043|ref|ZP_02443096.1| hypothetical protein ANACOL_02397 [Anaerotruncus colihominis DSM
           17241]
 gi|167666713|gb|EDS10843.1| hypothetical protein ANACOL_02397 [Anaerotruncus colihominis DSM
           17241]
          Length = 293

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 85/303 (28%), Gaps = 22/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A G ++V   L   +       +  AY      + +     L + +
Sbjct: 6   IVNGISLGAVYALIAVGFALVFSILKFSNFAHGGMISAAAYIAYFFYASFETPPSLWVTL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                 + G+ + L +L +R      +  I   +                   +      
Sbjct: 66  LFTAVVSLGVALLLDTLCYRRIRKNNSPNIYYFVASITFAILIE-------QILTVFFGK 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +            +      VL     +   ++L + RT I  A R +  N +
Sbjct: 119 TSYGFPGMFEVASVRLLGASFATMDLVVLAVSIAMLVVLMLLINRTKIGLAIRAVAINPR 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +     F  L  FA++    G++G                 S  +      ++GG+
Sbjct: 179 ASRLMGINSGFIVLFTFALAGFLAGVSGTLLGIKYSV--YPALGSSMMVKGFIASVIGGL 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SLS    A  +L  +  +                         ++   + + + +R   
Sbjct: 237 GSLSGAIAAAILLGVIEMVSIYFLGSSVTPA-------------ILFGIMLVFLFLRPQG 283

Query: 339 LLR 341
           +  
Sbjct: 284 ISG 286


>gi|146341004|ref|YP_001206052.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. ORS278]
 gi|146193810|emb|CAL77827.1| Putative Branched-chain amino acid ABC transporter (permease
           protein) [Bradyrhizobium sp. ORS278]
          Length = 288

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 89/287 (31%), Gaps = 16/287 (5%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
             +   I    +   GL+I+ G + +++L       +GAY+ VI  +        ++ ++
Sbjct: 9   LDVLNGISSLFLLCLGLAIIFGMMKIINLAHGEFIMLGAYATVISANAGVNIWIAMLIIA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +  G  G+++    ++F    L  + L                      I       + 
Sbjct: 69  PLFVGIVGLVIERCLIRFLYGRLVDSMLA--------------TWGLSLLIIGIITTIYG 114

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T          F         +  ++ L    + A I   +R T      R    N   
Sbjct: 115 NTQQGVPTPLGGFSIGSYQSSYYTLFLALMAAVMMAIIYGVMRYTRFGLVARATMQNPAM 174

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L        +S FA+ +A  G+AG   A         +   +        V+ GG  
Sbjct: 175 AATLGVNPARVYMSTFALGAAVTGLAGGLLAPVSGI--TPVMGGAYVAKAFMTVVGGGAA 232

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            LS    A ++   V ++        +  ++ F  +  +       I
Sbjct: 233 ILSGTLSAASLFGSVNQVGAYFTTPVYGEVIVFTTAIVLIRLLPQGI 279


>gi|84499418|ref|ZP_00997706.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
 gi|84392562|gb|EAQ04773.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
          Length = 340

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 47/344 (13%), Positives = 102/344 (29%), Gaps = 55/344 (15%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---------------- 82
           I +   +   Y + A GL+++ G+LG+++      + IGA+  V                
Sbjct: 8   ILNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFCSVTLSKLLNLSFETVDPT 67

Query: 83  -----------------------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
                                  +  +    S+ L I  +  I    G +M    +K   
Sbjct: 68  QKDFLGNPLKVKTPYVESWFGPEVGATIIDWSVPLAILFAIPIMLVIGYVMERGLIKHFY 127

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
                  ++++     +L +      G   I            +  +          + Y
Sbjct: 128 KRPHADQILVTFGLAIVLQEIVKFYFGANPIQTPAPDA-----LSGVANLGGALGLQIAY 182

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
            I+    +     L      +L+ T      R    +++    L   I       F +++
Sbjct: 183 PIWRLVYIGFSLLLIFGAFAFLQFTTFGMVVRAGMADRETVQLLGIDIDRRFTIMFGLAA 242

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  G+AG  +                 ++   +V++GGM SL     A  +L  +     
Sbjct: 243 AIAGLAGVMYGP--INAPNYHMGMDFLVLSFVVVVVGGMGSLPGAVLAGFLLGILEAFAS 300

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                          +    +  ++ +   +V+L R   L+  +
Sbjct: 301 T---------TWATTTIPGINQIIIYLVAIIVLLTRPRGLMGKK 335


>gi|314982920|gb|EFT27012.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL110PA3]
 gi|315091226|gb|EFT63202.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL110PA4]
          Length = 333

 Score = 55.6 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +   I ++GIQ  +  + A+G++ V+ + G + L+     
Sbjct: 35  ALVGLIILCIALFIATPVFLTVPNIINIGIQAAVVAIMAFGMTFVIVTSG-IDLSVGSVA 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A     + S  GL  WL + +  +I    G + GL     +                
Sbjct: 94  ALSAMVSAWMFSNAGLPGWLTLIIGLLIGLLAGAVSGLAIAYGKLPAFI----------- 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  + +      +        +   ++ +    
Sbjct: 143 -----------ATLAMMSVARGLTLVISGGTPVATSDAVNQLGADVGPVPVPVIMLALAG 191

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N++A       +    ++ +A++  F G+AG   A    
Sbjct: 192 VVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALAGVFAGLAGLVLAGRLS 251

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLS-----KIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI G   S              +L  +      +N   F   
Sbjct: 252 SAQPQAGFGYELDAIAAVVIGGASLSGGSGKASGTFVGAVLLAVIRNGLNILNVSSFWQQ 311

Query: 310 LKFDCSFNMR 319
           +   C   + 
Sbjct: 312 VVIGCVIALA 321


>gi|260467510|ref|ZP_05813678.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259028737|gb|EEW30045.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 239

 Score = 55.6 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 101/244 (41%), Gaps = 27/244 (11%)

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +I+    +++ +P L+ +G Y+ + T   +++   +++    IT G  GI     LY 
Sbjct: 7   SGIIATLAAILVTIPILRLKGIYIILVTFGFAQLVMQVILSQSDITGGTQGIVRIPGLYV 66

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +    +F              +Y+ L +   S   +    R+    +   +RDN++
Sbjct: 67  FDHNMIRDGKF------------AYFYIALALLVASTLFLRVFVRSRAGASIVALRDNEE 114

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              S   +I+  ++   A S+ F G+AGAF+AA +   S D+F  S   I++S+V+LGG 
Sbjct: 115 YAISRGVSIVRQRMLTLAASAFFTGIAGAFYAAYQRNASIDVFGMSLATIILSMVLLGGT 174

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +++     A+ +L    E                   F      +  + +  V+L     
Sbjct: 175 STIYGAIVASFVLTIFAEWMA---------------DFGAWRPMITAVLIIGVMLAYPSG 219

Query: 339 LLRL 342
           L  +
Sbjct: 220 LAGM 223


>gi|88800383|ref|ZP_01115948.1| ribose ABC transporter permease [Reinekea sp. MED297]
 gi|88776830|gb|EAR08040.1| ribose ABC transporter permease [Reinekea sp. MED297]
          Length = 327

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/326 (11%), Positives = 95/326 (29%), Gaps = 28/326 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R++       +  VV  +   +      + + I ++  Q+    + A G + V+ + G +
Sbjct: 18  RIDFATYAPLIALVVLFIASSIASEYFLNARNITNILRQVSYTGIIAIGATFVIIAAG-I 76

Query: 67  SLNCVIAYAIGAY--SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            L+     A+      + I      +         A++ GA    +    +        I
Sbjct: 77  DLSVGSMVALVGVVTMFAINSIAGDVGGVFFGIAVALVFGAALGAINGVMVTKGRVTAFI 136

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL    IF+++ +             +   +                      Y + + 
Sbjct: 137 VTLATMSIFRSVALYLSDAGEVVGNNNLYPEI-------------------GGGYFMGVP 177

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           + +     L+    + LR TA       +  N          +       F ++   +G+
Sbjct: 178 FPVWVFFLLAVFAHILLRHTAYGRHVCAVGSNPNVARYSAIPVERVIFLTFVIAGFCVGV 237

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELC 298
           +    ++  + ++P        +  I+ V++      GG  ++        IL  +  + 
Sbjct: 238 SAVLLSSRLNSVAPGDMGAYFELDAIAAVVIGGTSLAGGRGTIVGTVIGALILGIINNML 297

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLM 324
             +    +   L       +      
Sbjct: 298 NLLGVSAYLQGLVKGLVILIAVLLQY 323


>gi|94984909|ref|YP_604273.1| inner-membrane translocator [Deinococcus geothermalis DSM 11300]
 gi|94555190|gb|ABF45104.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Deinococcus geothermalis DSM 11300]
          Length = 286

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 95/290 (32%), Gaps = 13/290 (4%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
              + + +  +Q  +Y + A GL++ VG +G+++        IGA+      +  G+   
Sbjct: 3   LFWQTLLNGLLQSGLYALVAAGLALAVGVVGIVNFAHGEFLMIGAFLAWGASTSLGVDPL 62

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L +P+ A+   A G +    S++       +  ++++     +L     +  G       
Sbjct: 63  LSLPLVAVAVFAVGALTYRVSIRHVLLAPELNQMLLTFGLGILLQNLALMWLGGN----- 117

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                   TV +  +        +               + A++   L RT +    R +
Sbjct: 118 ------TRTVTTPYQGSSIRLGDLSVGGPKAIAFGLAVVILAALYAVLYRTNLGRQMRAV 171

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             N++    +   +    L AF VS A   +AG   A                +   +I+
Sbjct: 172 AQNRRGSQLIGIHVDRVYLIAFGVSCALAAVAGVLVATLLFA--SPTVGLVFALKAFAII 229

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           ++ G+ +L+ +  A+ +L     L                          
Sbjct: 230 VMAGLGNLTGVLWASVVLGVSEALVQTYVPGGGGWSDAVFFLLIFATLVF 279


>gi|331011256|gb|EGH91312.1| sugar ABC transporter permease [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 342

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 96/320 (30%), Gaps = 26/320 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + L+ +   L+  LF    + Q ++ +      M +Q+ I    A G++ V+ + G + L
Sbjct: 27  IFLVLIGIGLIFELFGWIVRDQSFLLNSQRLVLMILQVSIIGFLAIGVTQVIITTG-IDL 85

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+ A     L              S         +  LP        L +  L 
Sbjct: 86  SSGSVLALSAMIAASLAQ-----------TSDFSRAVFPSLTDLPVWIPIVVGLGVGLLA 134

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
            +     I I   P      G+ V+ R      T    +       + +        + L
Sbjct: 135 GAINGSIIAITGIPPFIATLGMMVSARGLARFYTEGQPVSMLSDSYTAIGQGAMPVIIFL 194

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +        + LR T        I  N +A  +    +    +  ++++    G+AG  
Sbjct: 195 VVA---VIFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLVIVYSIAGLLAGLAGVV 251

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            +A        M    E   + + VI      GG+  ++       IL  +      +  
Sbjct: 252 ASARAATGQAGMGMSYELDAIAAAVIGGTSLSGGVGRITGTVIGALILGVMASGFTFVGV 311

Query: 304 YYFNSLLKFDCSFNMRHTTL 323
             +   +       +    +
Sbjct: 312 DAYVQDIIKGLIIVVAGWVI 331


>gi|239833872|ref|ZP_04682200.1| monosaccharide-transporting ATPase [Ochrobactrum intermedium LMG
           3301]
 gi|239821935|gb|EEQ93504.1| monosaccharide-transporting ATPase [Ochrobactrum intermedium LMG
           3301]
          Length = 332

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 92/311 (29%), Gaps = 23/311 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++  +   L         S   + ++     I ++ A G   V+     + L+     A 
Sbjct: 14  VIIALMVGLFASRAPGFASAGNLANIFNDTSILIIIALGQMAVI-LTKSIDLSVAANLAF 72

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
              +  +L + Y     +L+ V A+  GA    +    +        + TL    I++ +
Sbjct: 73  TGMAVAMLNATYPGLPLVLLIVLAVGIGAVLGAINGILVWKLNIPAIVVTLGTLTIYRGM 132

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                                  G  V +      F ++       +  +      + A 
Sbjct: 133 AFVLSG-----------------GAWVNAHQMTAPFLNTPRTVVFGLPLLGWTAILIVAL 175

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           I + L RT    A      N  A       +   +  AF +S A  G+ G  + +     
Sbjct: 176 IYVLLTRTFFGRALYASGGNPTAAVYTGIDVGRTRFFAFVLSGALAGLCGYLWVSRYAVA 235

Query: 257 SPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
             D+    E   V + VI     LGG+ +++        L  +      ++   F  +  
Sbjct: 236 YVDVAAGFELDSVAACVIGGISTLGGIGTVAGAVLGALFLGVIKNALPVIDISPFWQMAI 295

Query: 312 FDCSFNMRHTT 322
                 +    
Sbjct: 296 SGSVIILAVIF 306


>gi|126697874|ref|YP_001086771.1| ribose ABC transporter permease [Clostridium difficile 630]
 gi|115249311|emb|CAJ67124.1| ABC-type transport system, ribose-specific permease [Clostridium
           difficile]
          Length = 332

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 96/280 (34%), Gaps = 26/280 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +      +  V+  +++ +      +   + ++G QI I  + A G++ V+   G + L+
Sbjct: 24  RDQGSAAVGLVIIFIIMSVASSNFLTLDNLINVGRQISINAILAVGMTFVI-ITGGIDLS 82

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+    +      Y   IW+ + ++  I    G+I G      +           
Sbjct: 83  VGAVIALVGTFWATTVVNYNAPIWVGMILALTIGTILGVIKGAIISTQKLPPF------- 135

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 + +    I +G + ++   R           +    F      Y   +   ++ 
Sbjct: 136 -----IVTLAMLTIISGASFVFTGGRPI--------SVNTDAFKMLGRGYIGPIPIPVII 182

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           M  +  +    L+RT        +  N++A       +    +  +A++     +AG   
Sbjct: 183 MIIVVIAGHFLLKRTNFGRPVHAVGGNEEAARLCGVKVNKVIVKVYALAGLLTALAGIIL 242

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKI 284
           ++     SP +   +E   + ++V     ++GG  S+   
Sbjct: 243 SSRLASGSPTVGDGAELDAIAAVVLGGTNMMGGSGSIVGT 282


>gi|237808588|ref|YP_002893028.1| inner-membrane translocator [Tolumonas auensis DSM 9187]
 gi|237500849|gb|ACQ93442.1| inner-membrane translocator [Tolumonas auensis DSM 9187]
          Length = 360

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 92/299 (30%), Gaps = 9/299 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   V      + +        +  M   I I    A G+S V+ + G + L+      
Sbjct: 32  FIALFVILGFFTIMVDGFLEPTSLVIMVKHISINAFLALGISFVIITAG-IDLSIGATLG 90

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                   + ++    I L     A+      ++  +  +      +    +    +   
Sbjct: 91  FCGMVAGYMIAKG---IVLSPLGIAIFPSIWVVVPVVLVVGALIGAINGLIITRYNVAPF 147

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I           A + ++    F G +  S +    F        + + Y +  M  L+A
Sbjct: 148 ICTLGTMYIVRGAAMLLSGGETFPGLSGNSQLGNTGFEQIGAGTLLGLPYAIWMMFVLAA 207

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +    ++        +I DN++A       +   K+  + +S     +AG   ++    
Sbjct: 208 IVAYIAKKLPFGRHVYSIGDNERAAELSGIKVKNIKIWVYTISGFCAAIAGIVVSSQLVA 267

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             P      E   + ++V+      GG  +++       ++  + +    M    F  +
Sbjct: 268 SHPATGTAFEMNAIAAVVLGGTSLAGGRGTITGTLIGAFVIGILADGLVMMGVSEFWQM 326


>gi|118477394|ref|YP_894545.1| branched-chain amino acid ABC transporter permease [Bacillus
           thuringiensis str. Al Hakam]
 gi|118416619|gb|ABK85038.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bacillus thuringiensis str. Al Hakam]
          Length = 289

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 103/305 (33%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  +  LI  
Sbjct: 11  FVNGISTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYVLALIGA 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 71  IAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKVFWGPN 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L     F    VI   +  +V+L    +  ++++ L++T I    R    +++
Sbjct: 119 PIGAKLPLWLQGSFTFGGVILIKYRLFVILIGIIIYVALLVLLKKTKIGLMIRAGVMDKE 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 179 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++ + 
Sbjct: 238 GSVQGSAIASLIVGLAGAFTAYF--------------IPDLSLAINMLMLLFFLIVKPNG 283

Query: 339 LLRLR 343
           L+  +
Sbjct: 284 LVGEK 288


>gi|52143483|ref|YP_083347.1| branched-chain amino acid ABC transporter, permease [Bacillus
           cereus E33L]
 gi|196047037|ref|ZP_03114256.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus 03BB108]
 gi|225863897|ref|YP_002749275.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus 03BB102]
 gi|229184172|ref|ZP_04311381.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus BGSC 6E1]
 gi|301053494|ref|YP_003791705.1| branched-chain amino acid ABC transporter permease [Bacillus
           anthracis CI]
 gi|51976952|gb|AAU18502.1| branched-chain amino acid ABC transporter, permease [Bacillus
           cereus E33L]
 gi|196022141|gb|EDX60829.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus 03BB108]
 gi|225787002|gb|ACO27219.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus 03BB102]
 gi|228599287|gb|EEK56898.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus BGSC 6E1]
 gi|300375663|gb|ADK04567.1| branched-chain amino acid ABC transporter, permease [Bacillus
           cereus biovar anthracis str. CI]
          Length = 286

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 103/305 (33%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  +  LI  
Sbjct: 8   FVNGISTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYVLALIGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 68  IAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKVFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L     F    VI   +  +V+L    +  ++++ L++T I    R    +++
Sbjct: 116 PIGAKLPLWLQGSFTFGGVILIKYRLFVILIGIIIYVALLVLLKKTKIGLMIRAGVMDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++ + 
Sbjct: 235 GSVQGSAIASLIVGLAGAFTAYF--------------IPDLSLAINMLMLLFFLIVKPNG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|18312606|ref|NP_559273.1| branched-chain amino acid transport permease protein [Pyrobaculum
           aerophilum str. IM2]
 gi|18160076|gb|AAL63455.1| branched-chain amino acid transport permease protein [Pyrobaculum
           aerophilum str. IM2]
          Length = 320

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 113/310 (36%), Gaps = 31/310 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL--- 95
              +   I  Y+     ++I VG  G +    V   A+GAY   +  + +          
Sbjct: 23  YSKLIASIAFYMALGQAVNIFVGLTGYVDFGYVAFLAMGAYGVGVAITYWHYLGLFALPA 82

Query: 96  -IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
            + +  +++ +    +G  +L+ RG Y AIAT+ ++E  +++++                
Sbjct: 83  GLLLGVLLAASLAAAVGAIALRLRGAYFAIATIGVNEGIKHLIVGA-----------NIW 131

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
                     ++I+ F   ++  I  I    ++L    L+   +  ++ +    A   IR
Sbjct: 132 GGGAGLILGANMIKAFGRDTALFIANIGSTIMILLTGLLAVIAMYVIQASKAGYALAAIR 191

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF--AASRDRISPDMFKFSENIIVISI 272
            ++ A   +       KL AF  S+    + GA +    +      ++F     +  +++
Sbjct: 192 QDEDAAKVMGINPTKYKLMAFITSATLSSLLGASYFSLGNMQVFPENVFFVEYILDGLAV 251

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           + LGG  +++       +  GV  L                 +       +  + +FL++
Sbjct: 252 MFLGGAGTVTGPIVGGLVYFGVRYLV--------------GLAAPGMQALITALIVFLIV 297

Query: 333 LMRSHSLLRL 342
           ++    ++  
Sbjct: 298 ILMPKGIVGT 307


>gi|300172330|ref|YP_003771495.1| ribose transport system permease RbsC [Leuconostoc gasicomitatum
           LMG 18811]
 gi|299886708|emb|CBL90676.1| ribose transport system permease protein RbsC [Leuconostoc
           gasicomitatum LMG 18811]
          Length = 328

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/300 (10%), Positives = 83/300 (27%), Gaps = 23/300 (7%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
               +      + ++  Q+ I  + A+G++ V+   G + L+     A+ +    ++ + 
Sbjct: 41  AMNPSFLDPNNLLNLLRQVSINGLIAFGMTFVI-LTGGIDLSVGAILALTSALSAMMITS 99

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
              ++  ++    +     G+   + +               +  F   L          
Sbjct: 100 GVPTLIAMLVGIIIGGILGGVNGLIITK------------GGAAPFIASLATMTIFRGAT 147

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                 + +         + +F      F I    +  ++         + + L +    
Sbjct: 148 YVFTNGNPITGKAMNNSFVFQFIGRGYFFGIPVPVILMIIAF-----IILYVLLHKMTFG 202

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N+KA F     +   K   + +S      AG    +      PD     E  
Sbjct: 203 RKTYALGGNEKAAFVSGIKVNITKTWIYVISGIMSSAAGMILISRLSSAQPDAGTGFEMD 262

Query: 268 IVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V     + GG   +        I+  +      +    F   +       +    
Sbjct: 263 AIAAVVLGGTSLAGGRGRIFGTLIGALIIGTLNNGMNLIGISSFYQQIVKGIVIIIAVLL 322


>gi|163852905|ref|YP_001640948.1| inner-membrane translocator [Methylobacterium extorquens PA1]
 gi|218531731|ref|YP_002422547.1| inner-membrane translocator [Methylobacterium chloromethanicum CM4]
 gi|254562671|ref|YP_003069766.1| Branched-chain amino acid ABC transporter permease
           [Methylobacterium extorquens DM4]
 gi|163664510|gb|ABY31877.1| inner-membrane translocator [Methylobacterium extorquens PA1]
 gi|218524034|gb|ACK84619.1| inner-membrane translocator [Methylobacterium chloromethanicum CM4]
 gi|254269949|emb|CAX25927.1| Branched-chain amino acid ABC transporter, permease protein
           [Methylobacterium extorquens DM4]
          Length = 293

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 87/301 (28%), Gaps = 24/301 (7%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y + A G  ++  + G+ +          A ++V L  R        +   A++
Sbjct: 12  LLAGVMYALVAIGFVLIYKASGVFNFAQGAMVLCAALTFVTLTERDVPFWLAGLITLAIM 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 +  +              +    +   I    + +                   
Sbjct: 72  VTLAVAVERIVLRPLVNRSQITLFMATLGLSYIIEGGSQFVMGAS------------VHE 119

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   I         +    F          L  ++ L+  RT +  + R + D+ +A  S
Sbjct: 120 LDLGISDLPVAIGPIQLSSFDLVAAASAGALVIALWLFFERTRVGVSLRAVADDPQAALS 179

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +     + +AV+     +AG  + A +             +  + ++I+GG TS++
Sbjct: 180 IGIRLPVLWATVWAVAGFVALVAGLLWGARQ---GVQFSLTFVVLKALPVLIIGGFTSIT 236

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  I+     L            +    ++               +L+R   L   
Sbjct: 237 GAVVGGLIVGAADALAEIYLGPLLGGSVSTWFAYG---------LAVAFLLVRPAGLFGE 287

Query: 343 R 343
           R
Sbjct: 288 R 288


>gi|159043952|ref|YP_001532746.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12]
 gi|157911712|gb|ABV93145.1| inner-membrane translocator [Dinoroseobacter shibae DFL 12]
          Length = 343

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/344 (14%), Positives = 103/344 (29%), Gaps = 52/344 (15%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG------------- 85
           I +   +   Y + A GL+++ G+LG+++      + +GA+  V L              
Sbjct: 8   ILNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMLGAFCAVTLSQILTLSHEVIDDT 67

Query: 86  --------------------------SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
                                     +    ++ L I  +  I    G+ M    +K   
Sbjct: 68  RTDFLGNPLKVDVPYVYDIFGQAAGDTIIDWAVPLGILFAIPIMAGIGIAMERGLIKHFY 127

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
                  ++++     +L +      G   I       F+G+     +    F    +IY
Sbjct: 128 KRPHADQILVTFGLAIVLQEIIKYFYGANPIPTPAPDAFIGSFDFGAML--GFDPGSIIY 185

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
             +     L    + A++  +L+ T      R    +++    L   I       FA+++
Sbjct: 186 PYWRLVYFLFAMTIIAAVFAFLQFTTFGMVVRAGMADRETVGLLGINIDKRFTIMFAIAA 245

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
              G+AG  +A            F     V+ +V    M SL     A  +L  +     
Sbjct: 246 CVAGVAGVMYAPINSPNYHMGMDFLVLSFVVVVVGG--MGSLPGAVAAGFLLGILESFAS 303

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                     +     + +    L+          R   L+  +
Sbjct: 304 MSWAINLVPGINQIIIYLVAIIILLT---------RPRGLMGRK 338


>gi|302337230|ref|YP_003802436.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
 gi|301634415|gb|ADK79842.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
          Length = 325

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 89/311 (28%), Gaps = 25/311 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  ++  ++  +   +  +   I ++ +Q  +  + A G+S+V+ S G++ L+     A+
Sbjct: 26  LSFIILLIVAIVVSPSFLAWNNIANLFVQGAVIGICAMGMSLVI-SAGMIDLSVGSIVAL 84

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
            +  + +       SI L +          G++ GL   K R     +    MS     I
Sbjct: 85  IS-GFGVSVLNNTHSIVLTLLFCIGSGVILGLVNGLLVTKGRIAPFIVTLATMSAWRSVI 143

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
               +           A            +     F          +             
Sbjct: 144 NQMGQGGPFTVDNQMYAPFRNIAAGRFFGIPHLMIFFIIISFITAML------------- 190

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               + +T        +  NQ+A       +   K+  F  +    G++    A+    I
Sbjct: 191 ----MSKTKFGTYVYAVGSNQQAARLSGINVDRIKMFIFTYAGTLYGLSAFLLASRLTSI 246

Query: 257 SPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                     +  I+ V +GG         +        +L  +  +    N   F + L
Sbjct: 247 QAASAGSGYEMDAIAAVAIGGTSMEGGKGKIIGTFLGVLMLRIINTVLIMANVPPFLNGL 306

Query: 311 KFDCSFNMRHT 321
                  +   
Sbjct: 307 VTGIIIIVAVL 317


>gi|297155591|gb|ADI05303.1| putative ABC transporter permease protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 362

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 80/272 (29%), Gaps = 25/272 (9%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             +   +  +  Q  +  +   G++ V+ + G + L+     A+   S            
Sbjct: 79  FLTTDNLQLVLTQASVIGVVTVGMTFVI-TSGGIDLSVGAMVALA--SVWATTLATQDFG 135

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
              I + A++ G    ++    + + G    IATL M    + + +              
Sbjct: 136 LGGILMCAVLVGLGCGLVNGVLIAYGGLVPFIATLAMLASARGLALHLSD---------- 185

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                  G T    ++          Y + +  +++    ++    L L RT        
Sbjct: 186 -------GKTQVVTVQPVLDLGLPDAYVLGVPPLVMIFALVTVVGWLVLNRTTFGRRTVA 238

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   +L  + +S    G+A                   E   + + 
Sbjct: 239 IGGNPEAARLAGIDVRRQRLMLYLLSGLCCGIAAFMLIVLTGSGQNTNGNLYELDAIAAA 298

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCC 299
           +I      GG  +++       +   +  L  
Sbjct: 299 IIGGTLLSGGRGTITGSVLGVLVFTTITNLFA 330


>gi|262039334|ref|ZP_06012647.1| xylose transport system permease protein XylH [Leptotrichia
           goodfellowii F0264]
 gi|261746596|gb|EEY34122.1| xylose transport system permease protein XylH [Leptotrichia
           goodfellowii F0264]
          Length = 381

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/368 (12%), Positives = 95/368 (25%), Gaps = 59/368 (16%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I   L V++ + + +  G   + + I ++  Q+ I  + + G+  ++   G + L+   
Sbjct: 17  IIFLALLVIWAVFISVTGGNFINSRNISNLLRQMSITGILSIGMIFII-ISGEIDLSVGS 75

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
             A+      I+     +   L I V+ ++  A G+  G  +         +    M   
Sbjct: 76  QMALLGGIAAIMDVNLKMPFILTIIVTLILGFAFGIWNGYWTANKGVPSFIVTLSGMLVF 135

Query: 133 FQNILIKWKPITNGKAGIYV---------------------------------------- 152
              ++      T                                                
Sbjct: 136 RGVLIGITGGKTISPISKSFEILGQSYIPKSLSYIIVIIYIGYMIYSKYSERKAKTVNGI 195

Query: 153 -ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
               L    T +             +     +   +L M  L A       +TA      
Sbjct: 196 EVPTLREDLTGIIISGILMFLGIIILNSYEGIPTPVLLMGLLIAVFSFVSNKTAYGRIVY 255

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            I  N  A           K+  + V+   + +AG    +     S      +E   + +
Sbjct: 256 AIGGNINAVKYSGIDTKKIKMIIYIVNGFLVSIAGLVLTSRLGAGSVSAGTNAELDTIAA 315

Query: 272 IVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            VI      GG   ++       I+  +      +N                    +  +
Sbjct: 316 CVIGGASLSGGKGKVTGAILGALIMASLDNGMSMLN------------VEPSWQYVVKGL 363

Query: 327 ALFLVILM 334
            L   +L 
Sbjct: 364 ILLFAVLF 371


>gi|260584511|ref|ZP_05852258.1| ribose ABC transporter permease [Granulicatella elegans ATCC
           700633]
 gi|260158029|gb|EEW93098.1| ribose ABC transporter permease [Granulicatella elegans ATCC
           700633]
          Length = 327

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 98/309 (31%), Gaps = 24/309 (7%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
                +   + +S     S+          A G++ V+   G + L+        A +  
Sbjct: 30  FAFFAISSESFRSFDTAVSILDASYYIGFLAIGVTFVI-ITGGIDLSIGTVMMCAAITGG 88

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
           +L ++ G  +WL +    +I G  G+  G+   KF                    +    
Sbjct: 89  VLHTKMGWPLWLALLAILVIGGVFGLFNGVLIAKFGLPPFIAT------------LGTMM 136

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           I+ G + I    +             +     +       +  +++     +      L 
Sbjct: 137 ISRGLSSIVSNVQSITFPLRGTGEGWYKDLFRTQDNLPTGLVVLIVVALLAALV----LN 192

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           +T +      I  N++A       +I  + +A+ +S    G+AG  +AA+   I P    
Sbjct: 193 KTKVGRYIFAIGSNKEATRLSGVNVIKWEGTAYVISGLLAGLAGIAYAATYSTILPGTGN 252

Query: 263 FSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC--CGMNFYYFNSLLKFDCS 315
             E   +  +V+      GG+ S+        I+  +        +  +Y   +  F   
Sbjct: 253 GMELDAIAGVVVGGTSLAGGVGSVIGTIIGVFIMSVLKIGLPYIDLQPHYQLFITGFVVI 312

Query: 316 FNMRHTTLM 324
             +    L+
Sbjct: 313 VAVYSDILI 321


>gi|159036360|ref|YP_001535613.1| inner-membrane translocator [Salinispora arenicola CNS-205]
 gi|157915195|gb|ABV96622.1| inner-membrane translocator [Salinispora arenicola CNS-205]
          Length = 292

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 74/265 (27%), Gaps = 14/265 (5%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  L+    A GL+++VG  G+ SL     Y  GAY    L       + L + V+
Sbjct: 15  LDGVAYGLLLFTIAAGLTLIVGVAGVFSLAHGTLYLAGAYLAWHLADGGWGGLALALAVA 74

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            ++    G+ + +         L    L    I      ++  +   +       R    
Sbjct: 75  VVLGTPVGVGLAVVVRPLVDRPLDQV-LATLGIAYIAADQFSRVFGAEPRSVDPPRAVAG 133

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
             ++               Y I+    +     +   +   + R+      R +  +   
Sbjct: 134 SVSLGDYQ-----------YPIYRLLFIAIGLVVVVGLFWLVERSRAGAIVRAVVADPGM 182

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +        +       +     AG   A             +  +  + + ++GG+ 
Sbjct: 183 AAATGLRTGAVRAGVLVGGAVLAVTAGVLGAPVIG--PSPGVDTTVLVYSLIVCVVGGLG 240

Query: 280 SLSKIAKATAILIGVVELCCGMNFY 304
           S+     A   +   + L   +   
Sbjct: 241 SIRGALLAALGVGQTLTLGVAIAPG 265


>gi|330888852|gb|EGH21513.1| sugar ABC transporter permease [Pseudomonas syringae pv. mori str.
           301020]
          Length = 341

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/319 (14%), Positives = 95/319 (29%), Gaps = 26/319 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + L+ +   L+  LF    + Q ++ +      M +Q+ I  + A G++ V+ + G + L
Sbjct: 27  IFLVLIGIGLIFELFGWIVRDQSFLLNSQRLVLMILQVSIIGLLAIGVTQVIITTG-IDL 85

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+ A     L              S         +  LP        L +  L 
Sbjct: 86  SSGSVLALSAMIAASLAQ-----------TSDFSRAVFPSLTDLPVWIPIVVGLGVGLLA 134

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
            +     I I   P      G+ V+ R      T    +       + +        + L
Sbjct: 135 GAINGSIIAITGIPPFIATLGMMVSARGLARFYTEGQPVSMLSDSYTAIGQGAMPVIIFL 194

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +        + LR T        I  N +A  +    +    +  + ++    G+AG  
Sbjct: 195 VVA---VIFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLVIVYNIAGLLAGLAGVV 251

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            +A        M    E   + + VI      GG+  ++       IL  +      +  
Sbjct: 252 ASARAATGQAGMGMSYELDAIAAAVIGGTSLSGGVGRITGTVIGALILGVMASGFTFVGV 311

Query: 304 YYFNSLLKFDCSFNMRHTT 322
             +   +       +    
Sbjct: 312 DAYVQDIIKGLIIVVAVVI 330


>gi|315105180|gb|EFT77156.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL050PA2]
          Length = 333

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +   I ++GIQ  +  + A+G++ V+ + G + L+     
Sbjct: 35  ALVGLIILCIALFIATPVFLTVPNIINIGIQAAVVAIMAFGMTFVIVTSG-IDLSVGSVA 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A     + S  GL  WL + +  +I    G + GL     +                
Sbjct: 94  ALSAMVSAWMFSNAGLPGWLTLIIGLLIGLLAGAVSGLAIAYGKLPAFI----------- 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  + +      +        +   ++ +    
Sbjct: 143 -----------ATLAMMSVARGLTLVISGGTPVATSDAVNQLGADVGPVPVPVIMLALAG 191

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N++A       +    ++ +A++  F G+AG   A    
Sbjct: 192 VVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALAGVFAGLAGLVLAGRLS 251

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLS-----KIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI G   S              +L  +      +N   F   
Sbjct: 252 SAQPQAGFGYELDAIAAVVIGGASLSGGSGKASGTFVGAVLLAVIRNGLNILNVSSFWQQ 311

Query: 310 LKFDCSFNMR 319
           +   C   + 
Sbjct: 312 VVIGCVIALA 321


>gi|304392873|ref|ZP_07374805.1| ribose ABC transporter, permease protein [Ahrensia sp. R2A130]
 gi|303295041|gb|EFL89409.1| ribose ABC transporter, permease protein [Ahrensia sp. R2A130]
          Length = 373

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/318 (11%), Positives = 94/318 (29%), Gaps = 25/318 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +   + ++  +   +  +          ++ + +   +Y+  A  ++ V+   G + L+ 
Sbjct: 21  FLGPMAMILAILLFMGVVEPARYFRLSNLNQILLDAALYMPMAMAMTFVITQRG-IDLSI 79

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A+ +     L  +YG   W    ++  +    G+I GL   KF+   L     +  
Sbjct: 80  GSVAALSSIIMAFLIKQYGFPAWSAALIALCLGALMGLINGLVITKFKVPDLIGTLAMDL 139

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                 L+  K +                   V +               IF+   ++  
Sbjct: 140 VYRGFALVIAKGL-------------------VLARFPDMITEIGRGQSLIFLPTPVVIG 180

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                   + L+ T        I  N +A       +   ++ A+ +  A   +AG    
Sbjct: 181 LITLVGGYVLLKSTYFGRYTIAIGSNPEASEMTGIAVDRHRVYAYVLMGAMAALAGIMLT 240

Query: 251 ASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
              + I      +    ++ ++V+      GG  S+        +L  ++     +   +
Sbjct: 241 GKLNAIQATSAPYFNLHVIAAVVVGGTSLFGGRASIVGSLAGVLLLSMMINALVTLRIEF 300

Query: 306 FNSLLKFDCSFNMRHTTL 323
           F   +             
Sbjct: 301 FWQSVASGVVIIFSVALY 318


>gi|284042729|ref|YP_003393069.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283946950|gb|ADB49694.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 342

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 104/321 (32%), Gaps = 26/321 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  L V+    + +   A  +Q  + ++   + +  + A G ++V+   G L L+     
Sbjct: 43  LAGLIVLIGAAIGVSNDAFLTQGNLVNVMRAVAVIGIAAIGATLVI-IAGNLDLSVGSVL 101

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
                   +    +G    L IP +  +  A G+  GL     R +   +   ++     
Sbjct: 102 GYSGLVGALAM--HGQIPALGIPAAIAVGVAVGLANGLLVTYGRVNPFIVTLGML----- 154

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                            V   L  + T                     +   ++ +  L 
Sbjct: 155 ----------------SVVRGLALITTNGTPQEVPESLLFIGQGEVAGIPVSVILLLALV 198

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                +L RT        + DN KA F     +    ++AF +  AF  +AG   A++  
Sbjct: 199 VIAQWFLSRTITGRRITAVGDNPKAAFLAGIPVRRTIITAFVLGGAFAAIAGIVNASNLA 258

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             + D       + +I+ VI+GG  SL+    +    +    L   +   +    L    
Sbjct: 259 LATTDA-GAGLELDIIAAVIIGGA-SLTGGRGSIIGALLGATLLALLRNAFVLLQLSPYL 316

Query: 315 SFNMRHTTLMVIALFLVILMR 335
                   +++ AL   + +R
Sbjct: 317 QVTTIGAVIILAALIDQLRLR 337


>gi|229590053|ref|YP_002872172.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25]
 gi|229361919|emb|CAY48819.1| putative permease component of ABC transporter [Pseudomonas
           fluorescens SBW25]
          Length = 342

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 93/327 (28%), Gaps = 21/327 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGI-QILIYVMFAWGLSIVV 60
                 L+ +  ++ +  V       +   +         + I Q+ I  + A G++ V+
Sbjct: 20  RRMPTELSIFLVLIGIGLVFELFGWIVRDQSFLMNSQRLVLMILQVSIIGLLAIGVTQVI 79

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
            + G + L+     A+ A     L              S         +  LP       
Sbjct: 80  ITTG-IDLSSGSVLALSAMIAASLAQ-----------TSDFSRAVFPSLTDLPVWIPVAM 127

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
            L +  L  +     I +   P      G+ V+ R      T    +       + + + 
Sbjct: 128 GLGVGLLAGAINGSIIAVTGIPPFIATLGMMVSARGLARYYTEGQPVSMLSDSYTAIGHG 187

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
                + L +        + LR T        I  N +A  +    +    +  ++++  
Sbjct: 188 AMPVIIFLVVA---VIFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLIIVYSIAGL 244

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVV 295
             G+AG   +A        M    E   + + VI      GG+  ++       IL  + 
Sbjct: 245 LAGLAGVVASARAATGQAGMGMSYELDAIAAAVIGGTSLAGGVGRITGTVIGALILGVMA 304

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                +    +   +       +    
Sbjct: 305 SGFTFVGVDAYIQDIIKGLIIVVAVVI 331


>gi|119718333|ref|YP_925298.1| inner-membrane translocator [Nocardioides sp. JS614]
 gi|119538994|gb|ABL83611.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Nocardioides sp. JS614]
          Length = 321

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 61/324 (18%), Positives = 114/324 (35%), Gaps = 29/324 (8%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A+ +   + L + A         +    L Y      L ++VG+L LL       +  GA
Sbjct: 10  ALAFACAVVLLVLAFNVPDNRVVLFNTFLAYGALVLSLDLMVGNLNLLPAGHAAFFGAGA 69

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY-LAIATLIMSEIFQNIL 137
           Y+ V+L    G  + +   V+ +  G    ++GLP +        AI T  + E+   ++
Sbjct: 70  YASVVLNQTAGWPLPIAGLVAMVGCGLFAAVIGLPVVGRTAGMSFAIVTFAIGELMVRVV 129

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
            K   +  G  G+ V+  +        ++ R+F      V   + +  +           
Sbjct: 130 AKSPDLLGGTEGLTVSWGVGEDMPFGFTIYRYFSLWLVAVFVLVLLVVI----------- 178

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             W+R + +      IRD++ A   L    +  K   F +SS      G  +A     I 
Sbjct: 179 --WIRSSHLGLRLTAIRDDENATRGLGINPVAYKTVVFGISSGLAAAVGVAWAPMVGYIG 236

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           PD     E+I ++S++I+GG+ S+                           L  +     
Sbjct: 237 PDSMATGESIFLLSLLIVGGIRSVGGALAGVL---------------LLMILPLYLEIEP 281

Query: 318 MRHTTLMVIALFLVILMRSHSLLR 341
                 +  AL L+ L+    +  
Sbjct: 282 AARIAFVGGALALIALIEPGGIAG 305


>gi|331003221|ref|ZP_08326728.1| hypothetical protein HMPREF0491_01590 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412874|gb|EGG92254.1| hypothetical protein HMPREF0491_01590 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 324

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/320 (11%), Positives = 86/320 (26%), Gaps = 16/320 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            +    ++    VV  ++  L            ++          A G++ V+ S G + 
Sbjct: 7   FSNQQAVVIAALVVICIVFSLLTDKFLQATTFTNISKSAYYVAFMAIGVTFVI-STGGID 65

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+        A        +      +++ +  + +    +   L S      ++A    
Sbjct: 66  LSIGTVAICAALIGGTFMEKGTPMFIVILIMLLVGAVFGLINGILVSHFELPAFIATLGT 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           +M       ++      +   G                    F       I         
Sbjct: 126 MMVSRGLGSIVSKTKTISFPQGDSAGAWF----------REIFMVTKDGGILPKNFPTGF 175

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +   +  + + L +T +     +I  N++A       +   +  A+  S  F  +AG 
Sbjct: 176 ILLAICAIVMAVVLNKTRLGRYILSIGSNKEATRLSGIDVKKYETMAYVFSGVFAALAGL 235

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
            + A      P+     E   +  +VI      GG+ S+        I+  +      + 
Sbjct: 236 AYVAVFSTAQPNTGNGFELDAIAGVVIGGTSLSGGVGSIVGTIIGVFIMTVLKIGFPYIG 295

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
                 L             
Sbjct: 296 VQSHYQLFITGIILVFAVYM 315


>gi|302337687|ref|YP_003802893.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
 gi|301634872|gb|ADK80299.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
          Length = 326

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 90/285 (31%), Gaps = 19/285 (6%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                   + ++  QI +  + A G+++V+   G + L+    Y   A    ++ +  G 
Sbjct: 36  PFFFKLNNLINIVRQISLLGIIAMGMTMVI-VSGEIDLSVGAIYGAAAIVSGMVLTHGGS 94

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            ++L +  +       G++ G+ +   R   L             + +    I  G A +
Sbjct: 95  -VFLAVVAALATGIFFGVLNGILTTYGRIPALI------------VTLGMMNIARGAALV 141

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               R+  L            F          +  V +    +         +T +    
Sbjct: 142 LCNARVISLSKRTVESSGLGAFLFLGQGKVFHIPVVSIIFIIVVIIANFLYSKTLLGFRL 201

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +  N+ A  +        K++AF ++     +AG    +    +        E  ++ 
Sbjct: 202 RAVGGNKLAAKAAGLNQNLIKIAAFGITGLLCALAGILNLSFLANVQGTTGTGLEMDVIS 261

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           +++I      GG  ++        I+  +      +    F  +L
Sbjct: 262 AVIIGGTSLSGGEGTIIGTLIGVLIMGVLKNGIILLGVSPFFQML 306


>gi|301060174|ref|ZP_07201041.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [delta proteobacterium NaphS2]
 gi|300445686|gb|EFK09584.1| putative high-affinity branched-chain amino acid ABC transporter,
           permease protein LivH [delta proteobacterium NaphS2]
          Length = 307

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 87/308 (28%), Gaps = 16/308 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG--LSIWL 94
           + + +       Y + A G ++V   L L +      + +GAY    + +       +  
Sbjct: 6   QNLVNALQWGSFYALIALGYAMVYSILMLFNFAHGDIFMVGAYIGFGVAALLVALAKMGA 65

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
           +     +I     +I    +         +    + E  +        +           
Sbjct: 66  VAAPGWLILVLTIIISMFLTSFLGMLVERVGYRPLREAPRASAAITGLMIGIILETGNLM 125

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
            L         LI    +    V        ++L    L  ++  +++ +    A R + 
Sbjct: 126 LLGAQRVRFPRLIESVTYDMGGVFVTNKKIMIVLVSIALMVALHQFVKHSKWGMAMRAMA 185

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
            +      +  +I       FA+ SA    AG  F  +   + P M             I
Sbjct: 186 FDYAVVPLMGVSINKVARLTFAIGSALAAAAGILFGIAYPVLDPYM-GIVFGWKAFVAAI 244

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           LGG  S+   A A  +L  +      +               +     +    + L+++ 
Sbjct: 245 LGGRGSIMGAALAGFLLGFIEIFVAMIFP-------------STLRDLIAYSIILLILVF 291

Query: 335 RSHSLLRL 342
           R H     
Sbjct: 292 RPHGFFGE 299


>gi|115523408|ref|YP_780319.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115517355|gb|ABJ05339.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 345

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 110/336 (32%), Gaps = 17/336 (5%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
                 +  +L  + +   +L  +  G+T     + S+ + ++I+ + A GL++V G + 
Sbjct: 20  PKAPRDWLPLLLPVVLALAMLPLIGSGSTWITLTVASLAMGMMIF-IMASGLTLVFGLMD 78

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           +L+       A+GAY   ++       +    I ++  +    G+     S         
Sbjct: 79  VLNFGHGAFIAVGAYVATLVLLPLASLVQADSIWLNLAVLLPAGLAAAAVSGALGLVVER 138

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           +  L +       ++              A     +            F    V    + 
Sbjct: 139 VLILPVYGQHLKQILMTTGGLIVAEQALYALWGPAIIPLPLPTALRGSFIFGDVAIAKYR 198

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
              +     +  +I L L RT I    R   +N++   +L   I    L  F V SA  G
Sbjct: 199 LLAMAVGLAMFIAIQLVLTRTKIGLLIRAGVENREMVEALGYRIRRLFLGVFMVGSALAG 258

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           + G  +A  R+++           ++  +VI+GG+ S+        ++  V      +  
Sbjct: 259 LGGTMWALYREQV-HASMGNDLTTLIFIVVIIGGLGSIGGCFIGAILVAMVANYGGFL-- 315

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
                                ++ +  +++ R   L
Sbjct: 316 ------------LPKLALVSNILLMVAILMWRPRGL 339


>gi|90420045|ref|ZP_01227953.1| permease protein, ABC-type branched-chain amino acid transporter
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90335379|gb|EAS49129.1| permease protein, ABC-type branched-chain amino acid transporter
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 335

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 54/317 (17%), Positives = 109/317 (34%), Gaps = 26/317 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  M + GL+++ G +G+L+      Y +GAY    + S +    W+ + V+
Sbjct: 31  LNGVTYGLLLFMVSAGLTLIFGMMGVLNFAHASFYMLGAYVAYAVSSVF--GFWVGLLVA 88

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +  G  GM +    L     +     L+++     I+ +   +  G   +         
Sbjct: 89  PIFVGIVGMGVERFLLPRVHAHGHAHELLLTFGLALIIEELIKLFFGDFPVNYQMP---- 144

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                  +RF  F      Y  +  ++      +   + L L RT      R        
Sbjct: 145 -----GGLRFSAFSIFGSDYPFYRLFIGAIAVVMFTVLWLLLTRTRTGIVVRAAERLPAM 199

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   I    +  F   +A  G+AGA   A     +         +IV  +V++GG+ 
Sbjct: 200 AGALGHNIPMVFMFVFGTGAALAGLAGAVAGAFYP--TNPNMGLELGVIVFVVVVVGGLG 257

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS-------------FNMRHTTLMVI 326
           SL     A+ ++        G+++   +                      +    T+   
Sbjct: 258 SLKGSLLASLLIGLFSSFAVGLDWSLASLFGLVGLGEWARSLGGLMTLELSSISATIPFA 317

Query: 327 ALFLVILMRSHSLLRLR 343
            + +V+L+R   L+  R
Sbjct: 318 LMLIVLLVRPAGLMGER 334


>gi|115351477|ref|YP_773316.1| inner-membrane translocator [Burkholderia ambifaria AMMD]
 gi|115281465|gb|ABI86982.1| inner-membrane translocator [Burkholderia ambifaria AMMD]
          Length = 345

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 98/311 (31%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +V  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 46  VLLVLCIGFGFLTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAS 104

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A + ++  +  G   WL +P++  +  A G+I G      R     +    M+       
Sbjct: 105 AVAALLASTIPGW-GWLGVPIALAVGLAFGVINGGLISFLRLPPFIVTLGAMT------A 157

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++      G        +L               F        + + ++++  C + A  
Sbjct: 158 VRGVARLIGNDTTIFNPQLP--------------FAFIGNGTILGVPWLVVIACAVIALS 203

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   +L  +A S    G+     +A     +
Sbjct: 204 WFILRRTVLGMRIYSVGGNPEAARLSGINVRAIQLFVYAASGLLAGLGAVMSSARLYAAN 263

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 264 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLTNGLVLLGVSDIWQYII 323

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 324 KGLVIIGAVAL 334


>gi|261492733|ref|ZP_05989281.1| putative sugar ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261495653|ref|ZP_05992099.1| putative sugar ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261308760|gb|EEY10017.1| putative sugar ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261311586|gb|EEY12741.1| putative sugar ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 334

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 99/309 (32%), Gaps = 27/309 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
           GA  SQ+ I ++  ++ I+ + A G++ V+ + G + L+     A+ A     +      
Sbjct: 37  GAFLSQRNIYNVLTEVSIFGIMAVGMTFVILTAG-IDLSVGSILAVTAMFAAYIIKGDNT 95

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
               +   +    G   +I     L        +  L ++++     I          G+
Sbjct: 96  ----VTLEAGAWGGMSWLIGLSICLGLGTFIGWLHGLGVTKLKLPPFIITLGGMTIWRGL 151

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            +               R++       +    + + ++ +    A       +T      
Sbjct: 152 TLVLNNGSPIAGFDEGYRWWGRGDILGVPVPVVIFAVVAIIGYFAL-----HKTRWGRYV 206

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
            ++  N +A       I    +S + V  A  G+AG   +A             E  ++ 
Sbjct: 207 YSVGGNPEAARLAGVNINRTLVSVYVVIGALAGLAGFILSARLGSAESVAGVSFELRVIA 266

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           S+VI     +GG   ++     + I+  ++     M+   +                +M 
Sbjct: 267 SVVIGGTSLMGGYGRVTGTIIGSIIMGVLINGLVLMDVSAY------------YQQIIMG 314

Query: 326 IALFLVILM 334
           + + L +  
Sbjct: 315 LIIILAVAF 323


>gi|320323857|gb|EFW79941.1| sugar ABC transporter, permease protein [Pseudomonas syringae pv.
           glycinea str. B076]
          Length = 341

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 94/320 (29%), Gaps = 24/320 (7%)

Query: 12  DKILCLLAVVYPLLLFLFLG----ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
              L L+ +     LF ++        + + +  M +Q+ I  + A G++ V+ + G + 
Sbjct: 26  SIFLVLIGIGLIFELFGWIVRDQSILLNSQRLVLMILQVSIIGLLAIGVTQVIITTG-ID 84

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+ A     L              S         +  LP        L +  L
Sbjct: 85  LSSGSVLALSAMIAASLAQ-----------TSDFSRAVFPSLTDLPVWIPIVVGLGVGLL 133

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             +     I I   P      G+ V+ R      T    +       + +        + 
Sbjct: 134 AGAINGSIIAITGIPPFIATLGMMVSARGLARFYTEGQPVSMLSDSYTAIGQGAMPVIIF 193

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +        + LR T        I  N +A  +    +    +  ++++    G+AG 
Sbjct: 194 LVVA---VIFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLVIVYSIAGLLAGLAGV 250

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
             +A        M    E   + + VI      GG+  ++       IL  +      + 
Sbjct: 251 VASARAATGQAGMGMSYELDAIAAAVIGGTSLSGGVGRITGTVIGALILGVMASGFTFVG 310

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              +   +       +    
Sbjct: 311 VDAYVQDIIKGLIIVVAVVI 330


>gi|172060516|ref|YP_001808168.1| monosaccharide-transporting ATPase [Burkholderia ambifaria MC40-6]
 gi|171993033|gb|ACB63952.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MC40-6]
          Length = 345

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 97/311 (31%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +V  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 46  VLLVLCIGFGFLTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAS 104

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A + ++  +  G   WL +P++  +  A G+I G      R     +    M+ +     
Sbjct: 105 AVAALLASTIPGW-GWLGVPIALAVGLAFGVINGGLISFLRLPPFIVTLGAMTAVRGVAR 163

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    +G           F        + + ++++  C + A  
Sbjct: 164 L--------------------IGNDTTLFNPQLPFAFIGNGTILGVPWLVVIACAVIALS 203

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   +L  +A S    G+     +A     +
Sbjct: 204 WFILRRTVLGMRIYSVGGNPEAARLSGINVRAIQLFVYAASGLLAGLGAVMSSARLYAAN 263

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 264 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLTNGLVLLGVSDIWQYII 323

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 324 KGLVIIGAVAL 334


>gi|240140233|ref|YP_002964711.1| Branched-chain amino acid ABC transporter, permease protein
           [Methylobacterium extorquens AM1]
 gi|240010208|gb|ACS41434.1| Branched-chain amino acid ABC transporter, permease protein
           [Methylobacterium extorquens AM1]
          Length = 293

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 87/301 (28%), Gaps = 24/301 (7%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y + A G  ++  + G+ +          A ++V L  R        +   A++
Sbjct: 12  LLAGVMYALVAIGFVLIYKASGVFNFAQGAMVLCAALTFVTLTERDVPFWLAGLITLAIM 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 +  +              +    +   I    + +                   
Sbjct: 72  VTLAVAVERIVLRPLVNRSQITLFMATLGLSYIIEGGSQFVMGAS------------VHE 119

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +   I         +    F          L  ++ L+  RT +  + R + D+ +A  S
Sbjct: 120 LDLGISDLPVAIGPIQLSSFDLVAAASAGALVIALWLFFERTRVGVSLRAVADDPQAALS 179

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +     + +AV+     +AG  + A +             +  + ++I+GG TS++
Sbjct: 180 IGIRLPLLWATVWAVAGFVALVAGLLWGARQ---GVQFSLTFVVLKALPVLIIGGFTSIT 236

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  I+     L            +    ++               +L+R   L   
Sbjct: 237 GAVVGGLIVGAADALAEIYLGPLLGGSVSTWFAYG---------LAVAFLLVRPAGLFGE 287

Query: 343 R 343
           R
Sbjct: 288 R 288


>gi|228933266|ref|ZP_04096122.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228826427|gb|EEM72204.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
          Length = 286

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 103/305 (33%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  +  LI  
Sbjct: 8   FVNGISTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYVLALIGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 68  VAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKVFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L     F    VI   +  +V+L    +  ++++ L++T I    R    +++
Sbjct: 116 PIGAKLPLWLQGSFTFGGVILIKYRLFVILIGIIIYVALLVLLKKTKIGLMIRAGVMDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MIQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++ + 
Sbjct: 235 GSVQGSAIASLIVGLAGAFTAYF--------------IPDLSLAINMLMLLFFLIVKPNG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|149189639|ref|ZP_01867921.1| putative permease of ABC transporter [Vibrio shilonii AK1]
 gi|148836451|gb|EDL53406.1| putative permease of ABC transporter [Vibrio shilonii AK1]
          Length = 332

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 98/312 (31%), Gaps = 18/312 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +++  L ++  +  ++L        +   I  M +   +  + A GL  VV   G + ++
Sbjct: 15  RHEFYLLIMIALIVVVLTATTADFLTLGNIFDMSVSSALLGIMACGL-FVVLIAGGIDIS 73

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                AI  Y         G +  +   ++A++    GMI      K +   + I    +
Sbjct: 74  FPATAAIAQYVAATYILNIGGNFLIAFGLAAIVGILLGMINATLVYKLKVPSIIITISTL 133

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +  F  ++             +  D +     T                Y+  M   +L 
Sbjct: 134 NLFFGLLIYFSNGEWLYGFPDWFMDGVELFSFT------------GSDGYDYGMSLPILT 181

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  + A     + +T +      +  N  A   +   +    L  ++   A  G+A    
Sbjct: 182 LITMIALTSFLMSKTRLGRQIYAVGGNADAASRIGINLFGINLFVYSYMGALAGIASVVQ 241

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
                 ++P+     E  ++ ++V     + GG  +L  +     +L  V      +   
Sbjct: 242 TQITQSVAPNSLMGFELTVLAAVVLGGTSMTGGKGTLFGVILGVILLAVVKNGLTLLGVP 301

Query: 305 YFNSLLKFDCSF 316
            +   +      
Sbjct: 302 SYWHTVVTGLII 313


>gi|91977602|ref|YP_570261.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91684058|gb|ABE40360.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 335

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 100/334 (29%), Gaps = 40/334 (11%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL-------------G 85
           I +   +   Y + A GL++  G+LG+++      + +GA+  V+               
Sbjct: 8   ILNGLDKGGAYALIALGLTLAFGTLGVVNFAHGALFMLGAFCAVVFNKLLTLEIIRVDPT 67

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL--AIATLIMSEIFQNILIKWKPI 143
                   L +    + +        L         L      L++  I +  LI++   
Sbjct: 68  KMTPWGSPLEVKTPYVQAMLGDWGKFLIDYSVPASILLAIPVMLLIGIIIERGLIRFFYK 127

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF--------------VIYEIFMYYVLLG 189
                 I V   L  +   +          +                ++Y  +    L  
Sbjct: 128 RPHADQILVTFGLAIVLQEIVKHFFGANPIAQSAPQVFSGSLQLTEAIVYPYWRIVYLAF 187

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              + A +  +L+ T      R    +++    L   I       F +++   G+AG  +
Sbjct: 188 SLAVIAMVFAFLQLTTFGMVVRAGMQDRETVGLLGINIERRFTIVFGLAAVVAGLAGVMY 247

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                        F     V+ +V    M SL     A  +L  +           F S+
Sbjct: 248 TPIVPPDYHMGMDFLVLSFVVVVVGG--MGSLPGAVLAGFMLGILQS---------FASM 296

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            +           ++ +   +++L+R   LL  +
Sbjct: 297 NEVKSLVPGIDQIIIYLVAVVILLVRPRGLLGRK 330


>gi|113867260|ref|YP_725749.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113526036|emb|CAJ92381.1| ABC-type transporter, permease component: HAAT family [Ralstonia
           eutropha H16]
          Length = 295

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/306 (9%), Positives = 80/306 (26%), Gaps = 28/306 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--YVILGSRYGLSIWLLI 96
           I S      +Y +   G++I+     +++        IGA    + +       ++ +  
Sbjct: 10  ILSGITNGFVYALIGVGMAIIFKGTRIVNAMQGEFAVIGALVAVFALKALGLPYALAIAG 69

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++A       + +       R      + L+++      L        G+    +    
Sbjct: 70  GIAAGAVSGLAIDVLFVRPMLRRGAGEESFLLLTIGLAFALSAAALYFGGRDSHLLPALG 129

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +                 +    +      L  ++ L+  RT    A      +
Sbjct: 130 GEGVVELFG-----------ATTPVHALALTGIAVLLVGALRLFYTRTLAGLAMTAASLD 178

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                +    +   +   F +   F  +AG                    +   +  ILG
Sbjct: 179 PDGATTTGINVRRMRTYTFLLGGGFGAIAGVLVTPLLSM--NYQMGIGLTLKGFAAAILG 236

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +         +L     L        +  ++                 L +++++  
Sbjct: 237 GLGNPLGAVAGGLLLGLAESLAVVGFPSGYRDVIALS-------------ILIVIMILLP 283

Query: 337 HSLLRL 342
           + +L  
Sbjct: 284 NGVLGR 289


>gi|330962852|gb|EGH63112.1| inner-membrane translocator [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 263

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 79/259 (30%), Gaps = 9/259 (3%)

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           + V   A+   +  +      L +      + +++ A G  +   + +   +   +  LI
Sbjct: 6   SYVAFMALAGLAM-LGIHSLPLLMIAGFAAAIIVTSAYGYSIERVAYRPLRNSNRLIPLI 64

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
            +      L     ++ G     + + L          + F    S  V+       V +
Sbjct: 65  SAIGMSIFLQNSVQLSQGSGNYAIPNLL-------PGSLSFGPGGSQEVLISYMQIVVFV 117

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
                   + L++ R+ +  A R   ++ K    L           F V +A   +A   
Sbjct: 118 VTLLAMTGLTLFISRSRMGRACRACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAML 177

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            +     I+P+   F   +   +  +LGG+ S+        +L         +    +  
Sbjct: 178 LSMQYGVINPNA-GFLVGLKAFTAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKD 236

Query: 309 LLKFDCSFNMRHTTLMVIA 327
           ++ F     +       I 
Sbjct: 237 VVAFGLLVLVLLFRPTGIL 255


>gi|262283709|ref|ZP_06061473.1| ABC transporter, permease [Streptococcus sp. 2_1_36FAA]
 gi|262260555|gb|EEY79257.1| ABC transporter, permease [Streptococcus sp. 2_1_36FAA]
          Length = 657

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 98/305 (32%), Gaps = 33/305 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S   Q L++ + A G+ I    L +  L    ++ +GA +  IL  +  L+  L    
Sbjct: 361 VLSALSQGLLWSIMAIGVFITFRILDIADLTAEGSFPLGAATTAILIMKG-LNPLLATIG 419

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +     G + G    K +   L    + ++ ++   L+         +G         
Sbjct: 420 GFIAGMLAGAVSGFLHTKMKIPALLTGIITLTALYSINLLVLGSSNLSLSGQK------- 472

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +         +     +  + L        +++ L  T +  A R   DN  
Sbjct: 473 -------TLVTMMTSLLSLSKTASVIVLGLAFVAFVILLLIVLLNTQLGLALRATGDNLT 525

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +   K+  + +S+  I +AG+  A +      +M   +         I+ G+
Sbjct: 526 MGAANGIKVDRIKILGYMLSNGLIALAGSLLAQNNGYADMNMGTGT---------IVNGL 576

Query: 279 TSLSKIAKATAILIGVV------ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            S+     A  I+  +        +  G   Y    ++    + + +   L    L  +I
Sbjct: 577 ASI---ILAEVIVKYLPLGKRLWSIVVGSILYRLVLVVILAMNVDAQMLKLASAILLALI 633

Query: 333 LMRSH 337
           L    
Sbjct: 634 LYVPE 638


>gi|264679092|ref|YP_003278999.1| UrtC [Comamonas testosteroni CNB-2]
 gi|262209605|gb|ACY33703.1| UrtC [Comamonas testosteroni CNB-2]
          Length = 446

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 110/324 (33%), Gaps = 19/324 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L      L  +      +     +M  QI   ++     +I++G  G+LS    +   +
Sbjct: 33  ILVWGLFALALIVAPLIFTSSLALTMLSQIGYLIIICLSYNILLGQGGMLSFGHAVYTGL 92

Query: 77  GAYSYVILGS-----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           G++  +   +        + + L+  V  +       + G  + K  G   A+ T+ + E
Sbjct: 93  GSFLAIHAMNKAAAGEMAIPLVLIPVVGGLAGMFFAALFGYVTTKKSGTTFAMITMGLGE 152

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +  ++ + +     G+ G             + +   + +F        + +YY++   C
Sbjct: 153 LVASMALMFPEFFGGEGG-------------ITTDRVYSKFFGLDFGSGLQVYYLIAVYC 199

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           F+  + +     T +      +RDN +    +       +  AF ++  F G+ G   A 
Sbjct: 200 FVCTAAMFAFTGTPLGRMLNAVRDNPERVEFVGYNTQRVRYFAFIIAGFFAGIGGGLTAI 259

Query: 252 SRDRIS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           + + I+  D      +   +    LGG T          +L+    L   +   +   L 
Sbjct: 260 NFEIITAMDSVSVVRSGGYLLFTFLGGATFFFGPIIGAVLLVLASVLLSELTKAWLLYLG 319

Query: 311 KFDCSFNMRHTTLMVIALFLVILM 334
                  M     +   + + + +
Sbjct: 320 LVFLLMVMYAPGGVASLIMMNLRV 343


>gi|206577013|ref|YP_002241220.1| rhamnose ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|206566071|gb|ACI07847.1| rhamnose ABC transporter, permease protein [Klebsiella pneumoniae
           342]
          Length = 335

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 93/320 (29%), Gaps = 23/320 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L   + +L L+ ++    +     +  S   +  M     I ++ A G  +V+     + 
Sbjct: 7   LKHREALLALVIILMIGAIGSRAPSFFSPGNLVEMFNDTAILIILALGQMMVL-LTKGID 65

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+      +L + Y     + +   A + G    ++    +   G    + TL
Sbjct: 66  LSMAANLALTGMIVALLNAHYPGIPVVALLALATLLGLLMGMINGLLVWRLGIPAIVVTL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I++ I+                      G  V S      F S      + +  + 
Sbjct: 126 GTMSIYRGIIFLLTD-----------------GGWVNSHQMSADFLSLPRSTLMGLPLLS 168

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                    +  +LR +    A  T   N  A +         +  +F +S A  G  G 
Sbjct: 169 WCAIAALLLVGYFLRYSRTGRALYTAGGNATAAYYTGINAGKMQFVSFCLSGALAGFCGY 228

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
            + +       D+    E  +V + VI     +GG   +         L  +      + 
Sbjct: 229 LWISRFAVAYVDVANGFELQVVAACVIGGISTMGGSGRVLGCLCGALFLGVINNALPVIG 288

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F  +        M    
Sbjct: 289 ISPFWQMAISGAVIVMAVLL 308


>gi|56419481|ref|YP_146799.1| ribose ABC transporter permease [Geobacillus kaustophilus HTA426]
 gi|56379323|dbj|BAD75231.1| ribose ABC transporter (permease) [Geobacillus kaustophilus HTA426]
          Length = 337

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 102/320 (31%), Gaps = 15/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L K+  +L +LAV+    +        + +    +   I I  + A G++  +   G   
Sbjct: 22  LYKHGTLLAILAVIAYFGI--TQDRFFTYENFSDILRSISIVTLVAIGITFSLIVDG-FD 78

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     ++   +       Y   I++ + V  ++  A G++  L  +KF+   L +ATL
Sbjct: 79  LSVGSTVSLATIASAAALVLYRQEIFITLLVPLLLGIAVGLLNSLLIVKFKLPDL-LATL 137

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                   + + +        G  + + +               F          + + +
Sbjct: 138 ATMYAINGVQLTYTK------GFSIYNDMPLPDGGTAPGKFIPSFLFIGQGELFGVPFSV 191

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L M F+  +  L+L  T     +    +N++A       +   +  A+ +S  F  + G 
Sbjct: 192 LLMLFVVIAAHLFLTYTKPGRLFYLTGENREAARLSGIPVNRYRTYAYVISGFFAALGGI 251

Query: 248 FFAASRDRISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMN 302
             A+                 V +      V   G  ++      + ++  ++      N
Sbjct: 252 VLASRIGTGQVSAGASLLMDSVAAAYIGFSVFGAGKPNVIGTLFGSILMGVLLNGLTMAN 311

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
             Y+   +            
Sbjct: 312 VPYYAQDIIKGAILVGALAL 331


>gi|16264667|ref|NP_437459.1| putative sugar uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|307318670|ref|ZP_07598103.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|15140805|emb|CAC49319.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|306895697|gb|EFN26450.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
          Length = 334

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 97/313 (30%), Gaps = 20/313 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               +   L   +F     S + ++    Q+   V+ A G+++V+   G + L+     A
Sbjct: 29  VAAFLALILFNVVFTPNFLSLQTLNVNLTQVATIVIVAIGMTLVIA-TGGIDLSVGSLMA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IG     +    +  +++ +  +   ++ A  + +    L    + L +    +  I   
Sbjct: 88  IGG---ALAPMIFMGTLFPVSSMPVAVALAFVLPVVATGLLGLFNGLLVTRFAIQPIIAT 144

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +++                    +      + R   F    +     +   ++ M  ++A
Sbjct: 145 LVLFIAGRGIA----------QVMTNGNLQVFRNEGFQFIALGRVAGIPAQVILMIAIAA 194

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                +R T        +  N+KA       +   KL  + +S A  G+AG    A    
Sbjct: 195 IAWAAIRYTVFGRQVIAVGGNEKASRLTGIPVHRVKLLVYMISGALAGVAGLIVVARNSA 254

Query: 256 ISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              ++      +  I+ V +      GG  ++        ++  V             +L
Sbjct: 255 SDANLVGLGMELDAIAAVAVGGTLLTGGRANIVGTVIGALVIQLVRYTLLANGVPDAAAL 314

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 315 IVKAALILLAVFI 327


>gi|146279904|ref|YP_001170062.1| ABC-type branched-chain amino acid transport system permease
           component-like protein [Rhodobacter sphaeroides ATCC
           17025]
 gi|145558145|gb|ABP72757.1| ABC-type branched-chain amino acid transport system permease
           component-like protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 297

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/280 (16%), Positives = 94/280 (33%), Gaps = 14/280 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +    Y++ A GLS++    G+++L     + +GAY   +L    G    L++  
Sbjct: 15  LLNGLLDGFYYMLIALGLSLIFSLGGIVNLAHGAFFTLGAYLAFVLTPMLGFFGALIVAP 74

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               + A  +   L +  +R D L    L        I+ +      G      +     
Sbjct: 75  LVAAALAVVVERFLFTRFYREDPLYSLLLTF--GMAMIIEQSLRWYFGATPRAYSMPDIL 132

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                 +Y  +  +++       A + + L RTA     R    N  
Sbjct: 133 RGQVFMGDF----------VYSRYRLFLIAVAIVTVAGVWVLLNRTAFGRIVRAGIQNPD 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L  ++     +  A++     +AG   A  +      M           +VI+GG+
Sbjct: 183 ILGTLGISLRPYLSTVVALAIGIAALAGVLMAPIQPV--HPMMGVEVGTAAFVVVIIGGL 240

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            S   +  A  ++  V     G+    ++ L  +   F +
Sbjct: 241 GSFWGVVIAALLVGLVKGAIIGIGLSQYSMLAIYLLMFVV 280


>gi|290961549|ref|YP_003492731.1| ABC transporter [Streptomyces scabiei 87.22]
 gi|260651075|emb|CBG74196.1| putative ABC-transporter subunit [Streptomyces scabiei 87.22]
          Length = 1051

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/283 (12%), Positives = 72/283 (25%), Gaps = 27/283 (9%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +         +   GL +   + G+L+        + AY        +G  +WL   V+
Sbjct: 10  LAGLSVGSAAALTGIGLIVTYRATGVLNFAHGAIAMVCAYLLRQCTVEWGWPLWLGTLVT 69

Query: 100 AMISGACGMIMGLPSLKFRGDYL---AIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +++     +     +      L      TL+ S     +L+    +  G      A  L
Sbjct: 70  LLLAAPALGLALERLVFRPLAVLGGDPAQTLVASLGVFVLLVGGAVLVWGPGARDDAPTL 129

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                  +  +      +   +                       RRT      R + D+
Sbjct: 130 VPGDPWGQLAVVVAVASAVGAVT----------------------RRTRFGRELRAVVDD 167

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +               + +A  S   G+ G   A         M      ++ +++    
Sbjct: 168 RSLAVLAGVDADRVAAAGWAFGSFTAGLTGVLLAPYVRLDPYGMPLLVMEVVAVAVAAR- 226

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            M SL         +          +   +   L      N+ 
Sbjct: 227 -MRSLPVAVLVALGIGVAQSQLTRFHPPGWAEPLLQAVGANLF 268


>gi|227823572|ref|YP_002827545.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
 gi|227342574|gb|ACP26792.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 295

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/316 (14%), Positives = 107/316 (33%), Gaps = 26/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    I    Y + + GL+I+ G L +++      Y +GA+   +L +
Sbjct: 4   IFGIPLQAFLGQLLIGLINGSFYALLSLGLAIIFGLLRVINFAHGAQYMLGAFIAWLLLA 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +G+  W  + ++ ++ G  G  +    L+       +  L+ +      +        G
Sbjct: 64  HFGIGYWPALILAPLLVGLIGAAIERTMLRRLYSLDPLYGLLFTFGLALTVEGTFRYFYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G   A      G               F+   I+  + ++   F+     L + +T +
Sbjct: 124 ASGQPYATPALLTG----------GANLGFMFLPIYRGWAVVFSLFICIGTWLVIEKTKL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
            +  R   +N     S    + F     + + +A   +AG   A         +   +  
Sbjct: 174 GSYLRAATENPVLVQSFGINVPFLLTLTYGLGAALAALAGVLAAPIYQV--SPLMGSNII 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+        +L     L                  +      ++ +
Sbjct: 232 IVVFAVVVVGGMGSIMGAIVTGYLLGVAEGLTKVF--------------YPEASNIVIFV 277

Query: 327 ALFLVILMRSHSLLRL 342
            + +V+L+R   L   
Sbjct: 278 IMAIVLLLRPAGLFGR 293


>gi|213053210|ref|ZP_03346088.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E00-7866]
          Length = 210

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 52/180 (28%), Gaps = 14/180 (7%)

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                      +           + +       ++ +++R + +  A R   ++ K    
Sbjct: 39  FNGQWIVGSSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRACRACAEDLKMASL 98

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L           F + +A   +AG         I+P    F   +   +  +LGG+ S+ 
Sbjct: 99  LGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGGIGSIP 157

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  IL     L        +  ++ F               L LV+L+    +L  
Sbjct: 158 GAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLILVLLVMPTGILGR 204


>gi|218782590|ref|YP_002433908.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218763974|gb|ACL06440.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 329

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 90/297 (30%), Gaps = 2/297 (0%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++     V  LL    +          +     ++  + A G+SI++G + +L+      
Sbjct: 13  LVIAGVAVLFLLPLFGIPPKIYLTLTIAGMAMGMLLFLVASGVSIILGLMDVLNFAHGAL 72

Query: 74  YAIGAYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           +A GAY            +    + ++     A  +               +    +   
Sbjct: 73  FAWGAYVGFSTFKFLSRWVEADSVILNFGAFAAAIICAMAVVAVLGMVLERVLVRRVYGN 132

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
               ++     T     +                     +    VI + +    +L    
Sbjct: 133 HLFQILITFGATIVLVELIRVIWGPNDDVMTVPFTFRGNWDVFDVIIDRYRIICILIGAL 192

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +   + L L++T +    R   +N+    ++   I       FAV +    + G   +  
Sbjct: 193 VFGVVQLILKKTKLGLIVRAGVENRDMVQAMGHNIFLLFTGVFAVGAGLAALGGLAMSIF 252

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             ++ PDM   +  +    +VI+GG+ S++       I+         +  +    +
Sbjct: 253 SLQVYPDM-GSTYLLFAFIVVIIGGLGSVTGSLVGALIVGLSYNYVAYLVPWAAAGV 308


>gi|290513081|ref|ZP_06552444.1| rhamnose transport system permease [Klebsiella sp. 1_1_55]
 gi|289774463|gb|EFD82468.1| rhamnose transport system permease [Klebsiella sp. 1_1_55]
          Length = 335

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 93/320 (29%), Gaps = 23/320 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L   + +L ++ ++    +     +  S   +  M     I ++ A G  +V+     + 
Sbjct: 7   LKHREALLAVVIILMIGAIGSRAPSFVSPGNLVEMFNDTAILIILALGQMMVL-LTKGID 65

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+      +L + Y     + +   A + G    ++    +   G    + TL
Sbjct: 66  LSMAANLALTGMIVALLNAHYPGIPVVALLALATLLGLLMGMINGLLVWRLGIPAIVVTL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I++ I+                      G  V S      F S      + +  + 
Sbjct: 126 GTMSIYRGIIFLLTD-----------------GGWVNSHQMSADFLSLPRSTLMGLPLLS 168

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                    +  +LR +    A  T   N  A +         +  +F +S A  G  G 
Sbjct: 169 WCAIAALLLVGYFLRYSRTGRALYTAGGNATAAYYTGINAGKMQFVSFCLSGALAGFCGY 228

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
            + +       D+    E  +V + VI     +GG   +         L  +      + 
Sbjct: 229 LWISRFAVAYVDVANGFELQVVAACVIGGISTMGGSGRVLGCLCGALFLGVINNALPVIG 288

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F  +        M    
Sbjct: 289 ISPFWQMAISGAVIVMAVLL 308


>gi|302523412|ref|ZP_07275754.1| sugar uptake ABC transporter permease [Streptomyces sp. SPB78]
 gi|302432307|gb|EFL04123.1| sugar uptake ABC transporter permease [Streptomyces sp. SPB78]
          Length = 320

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 91/290 (31%), Gaps = 31/290 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    VV  L+   F     S +   +  +Q+   V+ A G+++ +G+ G + L+     
Sbjct: 25  VYAGVVVLLLVNIAFTPHFLSTENFRTQAVQVAPIVIVALGMALAIGTEG-VDLSVGAVM 83

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      +      +   L+  +  +++G                 LA   L+     Q
Sbjct: 84  ALATSLLSLYLGYGLVVALLMAALGGVLAG-----------------LASGALVAFVGVQ 126

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+     +  G         L  +       +R     +      + + Y+++    L+
Sbjct: 127 PIVATLALMVGG-------RGLALVLLPQLKDVRNSGMNTLGTGSVLGIPYLVIIAAVLA 179

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   +RRT        I D++ A       +    +  + VS     +AG    A   
Sbjct: 180 VVVAFVVRRTTFGRQLLAIGDSRAAAKLAGLPVRRVLVIVYVVSGLLAAVAGILATARLQ 239

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELC 298
              P        +  I+ V++      GG   +        ++  +    
Sbjct: 240 ASDPTSLGTLMELSAITAVVVGGTPLSGGRVRIGGTVAGAVLIQLLTATL 289


>gi|254454318|ref|ZP_05067755.1| high affinity branched-chain amino acid ABC transporter, permease
           protein, putative [Octadecabacter antarcticus 238]
 gi|198268724|gb|EDY92994.1| high affinity branched-chain amino acid ABC transporter, permease
           protein, putative [Octadecabacter antarcticus 238]
          Length = 287

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 98/309 (31%), Gaps = 27/309 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ +  +     ++   G S      G L++       + A++   L    G  I    
Sbjct: 6   QFVLTGVVTGSFLILATIGFSFTRRVEGFLNIAHPELLGVSAFTTWGLNVMLGWHIVPSA 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V  + +   G+I+G               LI S     +L        G     +   L
Sbjct: 66  VVGIIFTAFVGLIIGRVVYDPIRTLGPAILLITSVGVHYVLGGSVDALVGTGIRSLDIPL 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                               +    +   V++     +  + L+L +T +  A R +  N
Sbjct: 126 AESYRFW------------GLRITNYQLLVIVFAALATTGLALFLNKTPMGLAIRAMSAN 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +   S    +       + +SS   G+AG   A            F + + ++++ IL 
Sbjct: 174 PELAASRGIDVKSTSRITWLISSGLAGLAGVMLAVIATL--STDIAFHQILQILAVAILA 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ SL  +  A  I+   +++        +  L+ F               + LV++ R 
Sbjct: 232 GLGSLYAVVAAGLIIGIAMDVSVFWIPAGYRPLVAFS-------------VVILVLMFRP 278

Query: 337 HSLLRLRTP 345
             L   ++ 
Sbjct: 279 EGLAGKKSR 287


>gi|239917028|ref|YP_002956586.1| ABC-type uncharacterized transport system, permease component
           [Micrococcus luteus NCTC 2665]
 gi|239838235|gb|ACS30032.1| ABC-type uncharacterized transport system, permease component
           [Micrococcus luteus NCTC 2665]
          Length = 471

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/298 (11%), Positives = 88/298 (29%), Gaps = 7/298 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +          ++ + G++I     GL ++     +  GA      G    L   + + +
Sbjct: 108 LTETLTVATPLIIISLGIAIAF-RAGLFNIGGQGQFIFGAMFATWFGVHLHLPPGVHLLL 166

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++    G++ G      +    A   ++   +    +     + N         R   
Sbjct: 167 VVVMGVLGGVLWGSVVGVLKAWTGAHEVILTIMLNYVAVNLLAYLLNTP-----VLRAPG 221

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V + +         +  +  +++               ++R+ +    R +  N  
Sbjct: 222 TTNPVSAPLDRSAMFPRLLGTDFRLHWGFFVALLAVLFTWWLMQRSTLGFRLRAVGANPD 281

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  +   ++  + ++A A+S    G+AGA   A  +         S     I++ +L G 
Sbjct: 282 AARTAGISVKGSYVAAMAISGGLAGLAGATHVAGTESTLNTSVAGSFGFDAITVALL-GR 340

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           +    +  A  +   +      M       +       ++    +    L   I    
Sbjct: 341 SHPVGVLFAGLLFGALRAGGVTMQTETGVPVDIVLVVQSVIVLLIAAPPLVRAIFRLP 398


>gi|319793846|ref|YP_004155486.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315596309|gb|ADU37375.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 435

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 110/331 (33%), Gaps = 33/331 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L      ++ +            +M  Q+   ++     +I++G  G+LS    +   +G
Sbjct: 21  LIWTLFAVVLIVSPLLFKSSLALTMLSQMGYLIIICLSYNILLGQGGMLSFGHAVYVGLG 80

Query: 78  AYSYVILGSR-----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           ++  +   +        + + L+  V  +      +++G  + K  G   A+ T+ + E+
Sbjct: 81  SFLAIHAMNMGAKGGMQIPLVLIPLVGGLAGMFFAILLGFVTTKKSGTTFAMITMGIGEL 140

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
             ++ + +     G+ GI                +    F       +I +YY++   CF
Sbjct: 141 VASMALMFPSFFGGEGGIT------------TDRVYGPTFFGFNFGSQIQVYYLIAAYCF 188

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +  +++     T +      +RDN +    +       +  AF ++  F G+ G   + +
Sbjct: 189 VCTALMYAFTGTPLGRMLNAVRDNPERVEFIGYNTQRVRYFAFIIAGFFAGIGGGLASIN 248

Query: 253 RDRISP-DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            + ++  D      +   +    LGG            +L+    L   ++  +      
Sbjct: 249 FEIVNAADSLNAIRSGGYLLFTFLGGAVFFFGPIIGAVLLVFASILLSELSKAW------ 302

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                         +    +++     +  L
Sbjct: 303 ---------QLYFGLVFVFMVMFAPGGIASL 324


>gi|148255668|ref|YP_001240253.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. BTAi1]
 gi|146407841|gb|ABQ36347.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 296

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 92/305 (30%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+L+          A ++V L  R       L+  
Sbjct: 11  LVGGLLSGVMYSLVAIGFVLIYKTSGVLNFAQGAMLLFAALTFVSLVERGTPFALALLAT 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A++      I                 +    +   I    + +               
Sbjct: 71  LAIMVALGITIERTVLRPLINQPPITLFMATLGLSYVIEGAAQLLWG------------T 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   +    F    V    F  +       L A   L+ R T    A+R + D+Q 
Sbjct: 119 QVHGLDIGVSDIPFDIGGVFISRFDLFAAAVAGSLVALFTLFFRYTRTGLAFRAVADDQF 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +     + +  +     +AG  + A               +  + +++LGG 
Sbjct: 179 AALAVGLRLPRVWAAVWTAAGIVALVAGLLWGARLGVQFSLS---LVVLKALPVLVLGGF 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++       ++  + +L       +F   ++   +          +    ++L+R   
Sbjct: 236 DSITGAIVGGLLIGAIEKLAEVYVGPFFGGGIEAWAA---------YVVALALLLVRPSG 286

Query: 339 LLRLR 343
           L   +
Sbjct: 287 LFGQK 291


>gi|260220866|emb|CBA28860.1| Ribose transport system permease protein rbsC [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 314

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 84/313 (26%), Gaps = 26/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  +V   LL +      +   + ++ +Q  +  + A G + V+   G + L      
Sbjct: 12  ALVAVLVLGALLTVASPYFLTTGNLSNILVQASVIALLAGGQTFVI-LTGGVDLAVGALT 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       +  + GL  +L I  +  I  A G+  G            +    +     
Sbjct: 71  ALAGAVAGHMMIKLGLDPYLCIAAAFAIGAAVGLFNGYLVAFVGIPSFIVTLGGL----- 125

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                 +       +       P       + +   +       
Sbjct: 126 ---------------TLWRGLAFESTGGFDNSGMPDPMPFIGYGQLLGVPMPIWITGIFF 170

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L  T +      +  N+     +   I + KL  + VS     +      A  D
Sbjct: 171 VVMAFILSSTKLGRYVYAMGSNEMGARQVGINIRWYKLGVYVVSGLSCALGALVLMARMD 230

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             S  M +  E   + +++     + GG  S+        ++  +      M    F  +
Sbjct: 231 SSSGKMAQMFELDAIAAVILGGTSLFGGRGSIWGSLLGAVLITMIRNGMNLMEISQFKQM 290

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 291 MAIGAVVIVAVWI 303


>gi|227820220|ref|YP_002824191.1| sugar ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227339219|gb|ACP23438.1| probable sugar ABC transporter, permease protein [Sinorhizobium
           fredii NGR234]
          Length = 348

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/316 (14%), Positives = 102/316 (32%), Gaps = 14/316 (4%)

Query: 14  ILCLLAVVYPLL--LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
           +L  +A+V+ +L  +F+      +Q+ +  + +Q+ +  + A G++ V+ + G + L+  
Sbjct: 29  VLVGIALVFEILGWIFVGSSFLGNQQRLSIIILQVSVIGILAVGVTQVIITSG-IDLSSG 87

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               + A     L         L       ++    +   L  L        I  LI+++
Sbjct: 88  SVIGLAAMVAASLAQSSTDVRAL----YPALTDLLPIWPILAGLLVGLLAGLINGLIIAK 143

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                 I    +     G+     L      +     +       + + + +  ++    
Sbjct: 144 TNIPPFIATLGMMVCARGVAKWYTLGQPIGLLNPNFTWLGKSFFILGFPLPLPVIIFIAV 203

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            + + I L   R         I  N +A       I    +  +A++    G+AG   AA
Sbjct: 204 AIISHIALRYTR--YGKFTYAIGANPQAARVSGIDIGSHLIKVYAIAGLLSGLAGVVTAA 261

Query: 252 SRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                 P M    E   + + VI      GG+  ++     T IL  +      +    +
Sbjct: 262 RAASAQPTMGVAYELDAIAAAVIGGTSLAGGVGRITGTVIGTIILGVITSGFTFLKIGSY 321

Query: 307 NSLLKFDCSFNMRHTT 322
              +       +    
Sbjct: 322 YQEIIKGMIIVVAVII 337


>gi|227819495|ref|YP_002823466.1| ABC transporter transmembrane protein [Sinorhizobium fredii NGR234]
 gi|227338494|gb|ACP22713.1| putative transmembrane component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 288

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 85/303 (28%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y         GL     + ++
Sbjct: 9   VDALAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMIGGYIASYAARDLGLGYGFAVLLA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
              +    + +     +       +  ++M+      +I       G     V       
Sbjct: 69  VFGTIVIAVPIERLLYRRIYGAPELTQVLMTIGITFCIIGIANYVFGPTLKTVPLPPALQ 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G               F        + +     ++ ++   + +TA     R   DN   
Sbjct: 129 G----------SVDLGFRSIATHRIFAIGCGLGVAVALWYLIEKTAFGVKLRAAVDNAAM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FAV+     + G   A          +     +  + +V +GG  
Sbjct: 179 AAALGVRTEIVYAVSFAVAVGLAALGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L G+      +   +                    +A+  ++ +    L
Sbjct: 237 SIPGALVACLLLGGIDTAGRYLVPEFGE--------------FFFYLAVIAIVCVFPRGL 282

Query: 340 LRL 342
              
Sbjct: 283 AGR 285


>gi|91783057|ref|YP_558263.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91687011|gb|ABE30211.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 290

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 92/304 (30%), Gaps = 25/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I        +Y +    + +V+ +  + +           +    + + Y LS W+ +P 
Sbjct: 6   IIGGLASGSLYALIGIAVVLVLQATDVPNFAQGEMAMFSTFVAYTMLNTYSLSWWIALPA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++    ++       I  +I +      L     +  G         +  
Sbjct: 66  AIVFAALQGIVVQQLIIRPLLGSPTINAVIATLGLNMALHSVAGMIWGNLTNVFTSPVAD 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L            F    V         +L    +     L LR T    A R    +Q 
Sbjct: 126 LPM----------FRLFGVNVSPDSALTILVSVAMIIVFTLILRHTRAGIALRAASQDQA 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +  ++  +   A+A+ S    +AG   A                I   +  +LGG+
Sbjct: 176 VAKLMGISVSRSFALAWAMGSVAGLVAGILVAPILFL--DVNLMAPLLIKGFAGAVLGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +SL  +     +L  V  L        FN  L F             I + +V+++    
Sbjct: 234 SSLPGVFVGGLLLGVVENLLGAYVSGTFNEALSF-------------ILIIVVLIVAPAG 280

Query: 339 LLRL 342
           +   
Sbjct: 281 IFGR 284


>gi|325962471|ref|YP_004240377.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468558|gb|ADX72243.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 324

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 90/298 (30%), Gaps = 27/298 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
            +  + +  V   L   +      S +   ++G Q  I  + A G+++V+ +   + L+ 
Sbjct: 25  REYFVYIALVGLVLFFSIASPVFFSVQNFANVGRQTAIVSIIAVGVTLVIVNA-QIDLSV 83

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
              +A+   +  +          L    +  +    G + G  ++K              
Sbjct: 84  GSVFALSGMASALALQHVSNFWVLGALAAISVGVVFGFVNGFLTVKLGIPSF-------- 135

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                       +T G  G+     L    T    +     F        + +   ++  
Sbjct: 136 -----------LVTLGMLGVARGIALLITDTRPVIIANRPYFSIFGDSSILGVPIAVVWT 184

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             + A   L L ++           N +A            + +F ++ A +G+A   F 
Sbjct: 185 IVIVALGFLLLHKSVFGLRVFATGGNPQAARFTGVKTHRTVILSFVITGALVGVASLLFT 244

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMN 302
                 +         + VI+ VILGG+       ++      + I+  +      M 
Sbjct: 245 G-IAHAARPDVGVGLELDVIAAVILGGVSLFGGRGTVIGALAGSLIIGMMNNGLVLMG 301


>gi|283786153|ref|YP_003366018.1| ABC transporter membrane protein [Citrobacter rodentium ICC168]
 gi|282949607|emb|CBG89226.1| putative ABC transporter membrane protein [Citrobacter rodentium
           ICC168]
          Length = 329

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 96/300 (32%), Gaps = 20/300 (6%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
             L LL +   + L +      S   +  +     I  + A GL  VV   G + ++   
Sbjct: 15  FWLGLLVIALAVGLSVRTDEFLSLGNLTDVATSYAILGILACGL-FVVLISGGIDISFPA 73

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
             AI  Y+       +G +  L + ++  +    G+I G      R   + I    ++  
Sbjct: 74  MTAIAQYAMASWVIAHGGNFLLALALACAVGLLLGLINGFLVYWLRVPAIIITIATLNVY 133

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           +  ++   K         +  + + +   T                Y+  +   LL +  
Sbjct: 134 YGLLVYATKGTWLYGFPDWFMNGINWFSFTATD------------GYDYGLTLPLLCLAV 181

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +     + +  T +      +  N+ A   L   ++      +       G+A    A  
Sbjct: 182 VIIFTAVLMNFTRLGRQIYAMGGNRDAASRLGMNLLKLHFYVYGYMGILAGVAAVVQAQI 241

Query: 253 RDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
              ++P+       + V++ V+L      GG  +L+       +L  +      ++   +
Sbjct: 242 TQSVAPNSL-LGFELTVLAAVVLGGTSMSGGRGTLTGTLLGVILLAFLQNGLTLLSVSSY 300


>gi|282853053|ref|ZP_06262390.1| amino acid or sugar ABC transport system, permease protein
           [Propionibacterium acnes J139]
 gi|282582506|gb|EFB87886.1| amino acid or sugar ABC transport system, permease protein
           [Propionibacterium acnes J139]
          Length = 325

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +   I ++GIQ  +  + A+G++ V+ + G + L+     
Sbjct: 27  ALVGLIILCIALFIATPVFLTVPNIINIGIQAAVVAIMAFGMTFVIVTSG-IDLSVGSVA 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A     + S  GL  WL + +  +I    G + GL     +                
Sbjct: 86  ALSAMVSAWMFSNAGLPGWLTLIIGLLIGLLAGAVSGLAIAYGKLPAFI----------- 134

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  + +      +        +   ++ +    
Sbjct: 135 -----------ATLAMMSVARGLTLVISGGTPVATSDAVNQLGADVGPVPVPVIMLALAG 183

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N++A       +    ++ +A++  F G+AG   A    
Sbjct: 184 VVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALAGVFAGLAGLVLAGRLS 243

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLS-----KIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI G   S              +L  +      +N   F   
Sbjct: 244 SAQPQAGFGYELDAIAAVVIGGASLSGGSGKASGTFVGAVLLAVIRNGLNILNVSSFWQQ 303

Query: 310 LKFDCSFNMR 319
           +   C   + 
Sbjct: 304 VVIGCVIALA 313


>gi|170698714|ref|ZP_02889780.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria
           IOP40-10]
 gi|170136418|gb|EDT04680.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria
           IOP40-10]
          Length = 345

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 96/311 (30%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +V  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 46  VLLVLCIGFGFLTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAS 104

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A + ++  +  G   WL +P++  +    G I G      R     +    M+       
Sbjct: 105 AVAALLASTIPGW-GWLGVPIALAVGLVFGAINGGLISFLRLPPFIVTLGAMT------A 157

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++      G        +L               F        + + ++++  C + A  
Sbjct: 158 VRGVARLIGNDTTIFNPQLP--------------FAFIGNGTILGVPWLVVIACAVIALS 203

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   +L  +A S    G+     +A     +
Sbjct: 204 WFILRRTVLGMRIYSVGGNPEAARLSGINVRAIQLFVYAASGLLAGLGAVMSSARLYAAN 263

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 264 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLTNGLVLLGVSDIWQYII 323

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 324 KGLVIIGAVAL 334


>gi|56697378|ref|YP_167746.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56679115|gb|AAV95781.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 292

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 79/301 (26%), Gaps = 25/301 (8%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
               +Y + + GLS++ G+LG+ ++   +   +GAY      + + L + L    +    
Sbjct: 13  TLGAMYALASVGLSLIFGTLGMFNMAHGLFMTLGAYVAYSAANAFQLPLVLGFVAAMAAG 72

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
              G++  L               ++      + +       G     +  ++Y      
Sbjct: 73  AVIGVLTHLLI----------VRFMLGSPDFGMNVMVATAGLGIVLQDIVLKIYGGYPYP 122

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
           + +          V   +     +     L       L +T    A R    N++A   +
Sbjct: 123 QVVRVEGIAQLGGVSITLQALTNVAVALALILGTAWLLMKTRFGRAIRATAMNREAAMLM 182

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
                   L   A++    G+AG   +                +    I ++ G+ ++  
Sbjct: 183 GVKADTVFLQVMALAGMLAGVAGLMISTQATL--SPQMGGDPLLKAFVICVVAGLGNVWG 240

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                  L  +           F           +                R   L    
Sbjct: 241 AGVCAFGLALLEAAIGYYFGVRFGFPTMLMLVILLLI-------------WRPQGLFGRE 287

Query: 344 T 344
            
Sbjct: 288 R 288


>gi|315652893|ref|ZP_07905863.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Eubacterium saburreum DSM 3986]
 gi|315484851|gb|EFU75263.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Eubacterium saburreum DSM 3986]
          Length = 319

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 88/324 (27%), Gaps = 28/324 (8%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            L L+K+   + L  V     + L      +   + ++  Q  +  + A     V+G  G
Sbjct: 8   KLELSKFTVYIVLGIVFIFFSIALNGKGFIASGNLLNILRQTAMVSVMAVAGVFVLG-AG 66

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L      A+ A    +   +   +I L + VS +     G I GL   K +      
Sbjct: 67  QIDLTVGSTAAMSAMFSAL-VLQSTNNILLTVIVSMLFGIFVGCINGLLVTKLKLPSFLA 125

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
                                G         ++   T    +   F        Y     
Sbjct: 126 TL-------------------GMMQAIRGMAMWITNTAAVPIKNQFFNTVFGTGYIGGAS 166

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            ++L          +   +T           N+ A           K++ F +S AF   
Sbjct: 167 VLILWTAIFYIIGFVLFNKTRFGRHALATGGNELAAKYSGLKTEKIKMTIFMMSGAFAAF 226

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELC 298
           AG  +A          F   + + VI+ V+LGG        S+      + ++  +    
Sbjct: 227 AGIMYAGRMQS-GRYSFGDGDEMSVIASVVLGGAAMSGGTGSMIGALAGSLLMGMINNAL 285

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTT 322
                      +            
Sbjct: 286 ILAGLSSAQQKIVNGAIIIFAVAL 309


>gi|297566727|ref|YP_003685699.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
 gi|296851176|gb|ADH64191.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
          Length = 313

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 58/306 (18%), Positives = 107/306 (34%), Gaps = 38/306 (12%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            ++        I    A    ++    G LSL     + +GAY+  +     G      +
Sbjct: 24  AFLLDTAQFAFIVTGLAIAWDLLA-RTGQLSLAHGAFFGLGAYAAALATPGLGTIP--AL 80

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            V   I+    +++GL +L+  G Y AIATL  SE+ + +++K +  T G  G+ V    
Sbjct: 81  LVGMAIAATSSLLLGLATLRLHGMYFAIATLAFSEVMRTLVLKAQ-FTGGSIGLPVQPAF 139

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                 + +  YY+ L +  + A + L + R+ +  A    R  
Sbjct: 140 -------------------GGQFPLGAYYLALAVLAVCALVSLGVSRSRLHYAMAATRQG 180

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS-PDMFKFSENIIVISIVIL 275
           +     L   ++  KL  FA+S+A  G+AG  +      ++  D F  +  +  + I I 
Sbjct: 181 EAVARVLGVPVVRIKLLVFAISAALSGLAGGVYGMKTLFLTPYDAFGLARAVEALVIPIF 240

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
           GG+ +                                       +  +  + L L IL  
Sbjct: 241 GGLYT--------------TAGPLLGGILLVGLETWLRLRIGEGYLVVYGVILVLTILFL 286

Query: 336 SHSLLR 341
              L+ 
Sbjct: 287 PKGLVG 292


>gi|209516164|ref|ZP_03265023.1| Monosaccharide-transporting ATPase [Burkholderia sp. H160]
 gi|209503448|gb|EEA03445.1| Monosaccharide-transporting ATPase [Burkholderia sp. H160]
          Length = 328

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/316 (9%), Positives = 82/316 (25%), Gaps = 26/316 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +    +      +      + ++  QI +  +   G++ V+     + L+     
Sbjct: 27  LVWVLLGLCAIATWLSPSFLGVMNLVNVLRQIALLGIVGIGMTFVI-LARGIDLSVGSIV 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A    ++ ++       ++   A+      +     ++                   
Sbjct: 86  GLIAVCTALMLTQGYPVYLCVLAAIALGLALGALNGLGIAIGR----------------- 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +    +T G   ++    L        ++     F        + +  V+     ++
Sbjct: 129 ---LPAFIMTLGTMVMFRGMALSIANGQPINVSSAPGFDYIGSGEILGLPIVVWLFAAIA 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L LR T+       +  N +A               + +S     +    + +   
Sbjct: 186 LLAYLVLRYTSFGRYVYAVGSNTEAAHLAGINTRVISFIVYVISGLTAAITAIVYVSRLT 245

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   +   VI      GG   +       AI+  +  +   +    F   
Sbjct: 246 VGEPTAGTGLELEAIAVTVIGGTSLFGGEGGVMGTVLGAAIIAVLANVMNLLGISPFTQQ 305

Query: 310 LKFDCSFNMRHTTLMV 325
           +       +     M 
Sbjct: 306 IIKGAIIIVAVLFEMY 321


>gi|209884042|ref|YP_002287899.1| inner-membrane translocator [Oligotropha carboxidovorans OM5]
 gi|209872238|gb|ACI92034.1| inner-membrane translocator [Oligotropha carboxidovorans OM5]
          Length = 291

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 102/307 (33%), Gaps = 27/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +  + + GL+I+ G+LG+L+L     + +G Y+  +    Y  S    +  
Sbjct: 11  LFNGLVLGALLALISSGLTIIYGTLGVLNLAHGAMFMLGGYAGYV-AYTYTDSFIAAVLG 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            ++     G+++    +++         L+++      +++      G   + V      
Sbjct: 70  GSLFVMVAGVLIERVIIRYFYGRPDEDQLLVTFGIGICIVELVRFFFGSLSLTVPPP--- 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I        F+ Y  +   ++  +     S+ L L RT I    R   ++  
Sbjct: 127 -------KIFSGITSLGFMYYPTYRLALVGIITVALLSLYLVLYRTRIGMIVRAGIEDSV 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I    +  F + +   G AG   A                  V+ ++    +
Sbjct: 180 MVSTLGINIYRVFMIVFGIGAMAAGFAGIANAPVVSLTPDMGDAILVQTFVVVVIGG--V 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         I   ++ +   +N                    ++  A+ LV+++R H 
Sbjct: 238 GSFPGAILGGLIAGEIISITSMINPG--------------YAYVMLFAAMTLVLVLRPHG 283

Query: 339 LLRLRTP 345
           L   ++ 
Sbjct: 284 LFGTQSR 290


>gi|118473679|ref|YP_888920.1| ABC transporter [Mycobacterium smegmatis str. MC2 155]
 gi|118174966|gb|ABK75862.1| ABC transporter membrane protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 352

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 88/284 (30%), Gaps = 13/284 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             + A+   +L  +     +S + + ++        + A G+ +++   G   L+  +A 
Sbjct: 37  AAVGAIAIFILFLIVAPPFRSPESMATVLYASSTIGIMAVGVGLLM-IGGEFDLSAGVAV 95

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              + +  +L     L++W+   ++ ++S A G   G   ++ +     I        F 
Sbjct: 96  TTSSLAASMLAYNLHLNLWVGAALALVLSLAVGFFNGFLVMRTKIPSFLITLGTF---FM 152

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              I           +         G      +         +   I + + +L     +
Sbjct: 153 LAGINLAVTKLLSGQVATPSVSDMQGFDSGRTVFASVIKVGPIDVRITVLWWILFTLIAT 212

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +     +T I N    +  NQ +  ++   +   K+  F V        G     S +
Sbjct: 213 YVLF----KTRIGNWIFAVGGNQDSARAVGVPVTKVKIGLFMVVGFCAWFVGMHLLFSFN 268

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIG 293
            I       +E   +I+ VI      GG  +         I   
Sbjct: 269 TIQSGQGVGNEFFYIIAAVIGGCLLTGGYGTAIGTLIGALIFGM 312


>gi|115523712|ref|YP_780623.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115517659|gb|ABJ05643.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 292

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 88/290 (30%), Gaps = 22/290 (7%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+++ G + +++        I  Y    L + + +   L +P+ A      G ++ 
Sbjct: 23  IAAGLALIFGLMDVVNFAHGEFLMIAMYVTFFLFAFFAIDPLLAMPLVAAALFVFGAVVY 82

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           L  ++F       A    + +    +     +     G+          +   S +    
Sbjct: 83  LLVVRF-------AMRAKTNVGMVQIFATFGLAIAMRGLAQYFFTPDYRSINASWLGGQT 135

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                V   +              ++ +++++T    A    R++  A   +        
Sbjct: 136 ISLGGVFLPVPQLVGAGVSILAFTALFVFIKKTDFGRALEATREDAGAVALVGIDKNRVF 195

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              + + +A +G+AGA  A             S  +I    V LGG  S+        I+
Sbjct: 196 ALGWGLGAALVGLAGAIMATFFYI--YPDVGASFALIAYVTVALGGFGSVFGAFAGGIIV 253

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             V      +      ++              +     LV+ +R   L  
Sbjct: 254 GLVEATTALILPPSLKAVG-------------IYAVYLLVVFVRPRGLFG 290


>gi|319650493|ref|ZP_08004633.1| ribose ABC transporter [Bacillus sp. 2_A_57_CT2]
 gi|317397674|gb|EFV78372.1| ribose ABC transporter [Bacillus sp. 2_A_57_CT2]
          Length = 314

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 104/312 (33%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  ++  ++L +   +  +   I ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 17  VLGLILITIILTIMSPSFLTTDNIFNVLRQVSINALIAYGMTFVI-LTGGIDLSVGSILA 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +     +  +I    + +GA   ++    +        IATL    IF+ 
Sbjct: 76  LASALTAGMLASGMDPVLAVIV--GLAAGAAMGMVNGLIITKGKVAPFIATLATMTIFRG 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             +                 +Y  G  +  L     F      Y + + + ++ M     
Sbjct: 134 FTL-----------------VYTDGRPITGLSDAVSFQMLGKGYFLGIPFPVVTMLIAYF 176

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   LR+T        I  N++A       +   K+  ++++     +AG   A+  + 
Sbjct: 177 VLFFILRKTTFGRGVYAIGGNEEASRLSGLKVDRLKIGVYSITGFLSALAGITLASRLNS 236

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +N   F   +
Sbjct: 237 AQPTAGASYELDAIAAVVLGGTSLSGGRGWIFGTLIGALIIGVLNNGLNLLNVSSFYQQV 296

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 297 VKGGVILLAVLL 308


>gi|225386944|ref|ZP_03756708.1| hypothetical protein CLOSTASPAR_00694 [Clostridium asparagiforme
           DSM 15981]
 gi|225046956|gb|EEG57202.1| hypothetical protein CLOSTASPAR_00694 [Clostridium asparagiforme
           DSM 15981]
          Length = 350

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/320 (11%), Positives = 87/320 (27%), Gaps = 20/320 (6%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I+  + + + ++  +      + + +  +  Q    V+   G +IV+   G ++L+   
Sbjct: 20  IIMLAVLIFFAVVNGMNGINFLASENLSVIVNQASFLVIVGIGQAIVI-LTGGINLSMGA 78

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
             A  +     +  +       +  V  +++GA   ++    +        IAT  M   
Sbjct: 79  VMAFSSVLCGGMLLKESNMFIGVPIVLVLLTGAATGLLNGIMITKLNIPPFIATFAMMYT 138

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            +              G+        +   +    R       F I    +   +L    
Sbjct: 139 CR--------------GLAWVYLRNRVLYPLNESFRQIAMGRLFKIGGFTVTVPMLIAFL 184

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
                   LR T           N  A            +  + +SS     AG  + A 
Sbjct: 185 ALLLFFWLLRFTNFGRKVYFTGANPVAAKFSGIQTDRLLIIVYIISSMLAAFAGMMYVAR 244

Query: 253 RDRISPDMFKFSENIIVIS-----IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +   P +   +    +         + GG  ++  +A    ++  +      +      
Sbjct: 245 LNACEPGLATKTHFEAITVSLIGGFAMSGGYGNIWGVAGGAVVVYTIQAGMNSLQMPSEL 304

Query: 308 SLLKFDCSFNMRHTTLMVIA 327
             L       M       + 
Sbjct: 305 QTLVNGFLIIMAVFMNQGLI 324


>gi|315425209|dbj|BAJ46878.1| branched-chain amino acid transport system permease protein
           [Candidatus Caldiarchaeum subterraneum]
          Length = 284

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/287 (12%), Positives = 82/287 (28%), Gaps = 15/287 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A GLS++ G LG+++L       + AY   +  S  G    L  P+
Sbjct: 11  LVNGLLMGAVYGIAAVGLSLIWGVLGVVNLAHGSFIILAAYIAYVFFSAAGAPPLLTAPI 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +  A G ++     +         +L+       ++        G     +      
Sbjct: 71  AVAMGFAVGYLLYKGVGRKVVTLDPSTSLLFFFGLSLLISNSILNIWGPDVRGIP----- 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                 I     L+        + + L+ T    A R +  N+ 
Sbjct: 126 --------WLIQSLELGGTRIPIARLIALVSTIISFMLLYMLLQHTYYGKAIRAVVANRV 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              S+   +      +  ++      +G   +            +       + V+LGG+
Sbjct: 178 GAASVGIDVDNVFAISMGIALGVTFFSGTMISLVNPFTPSSGDGYLMYS--FASVVLGGV 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
            ++     A   +  V  L         +  + F     +       
Sbjct: 236 GNIIGTLLAGIFMGLVESLVGVYFSQSISPAVAFIILVIVIMVRYRG 282


>gi|294678182|ref|YP_003578797.1| monosacharide ABC transporter permease [Rhodobacter capsulatus SB
           1003]
 gi|294477002|gb|ADE86390.1| monosacharide ABC transporter, permease protein [Rhodobacter
           capsulatus SB 1003]
          Length = 352

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/311 (8%), Positives = 75/311 (24%), Gaps = 10/311 (3%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +  ++      +      S      +     +    A G++ V+   G + L+      +
Sbjct: 26  VALILVFGFFAIMAPNFLSVANSVIVAKHAALTAFLAIGMTFVI-ITGGIDLSVGSTVGL 84

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
            +     L         +       +     ++     + F    L     +   I    
Sbjct: 85  CSMVSGWLILYGIDLGTVGTMQFNTLEITLIVMCVGVFVGFVNGILITKLNVAPFIATLG 144

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            +         +                S         +F+   + ++ ++         
Sbjct: 145 TLYIARGAALLSSGGRTFPNLSGNPDYGSASFPAIGAGTFLGLPVQIWMLIAV----GLV 200

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
                +RT +      +  N++        +   KL  +  S     + G   A+     
Sbjct: 201 AAYIAKRTPLGRHIYAVGGNERGAALSGVKVNRVKLFVYMFSGFCAAIVGLIIASQLQAA 260

Query: 257 SPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            P   +  E   + + V     + GG   +        ++  + +    M+   F   + 
Sbjct: 261 HPATGETFELNAIAAAVLGGTSLSGGRGKIGGTIVGAFVISILSDGLVMMSVSSFWQTVI 320

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 321 KGLVIVAAVVI 331


>gi|269218777|ref|ZP_06162631.1| putative sugar ABC transporter, permease protein [Actinomyces sp.
           oral taxon 848 str. F0332]
 gi|269211888|gb|EEZ78228.1| putative sugar ABC transporter, permease protein [Actinomyces sp.
           oral taxon 848 str. F0332]
          Length = 484

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/289 (12%), Positives = 80/289 (27%), Gaps = 8/289 (2%)

Query: 51  MFAWGLSIVVGS-LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMI 109
           +   GL++ +G   GL ++        GA     +G +  +   + +    + +  CG I
Sbjct: 148 LIIAGLALALGFRGGLFNIGGTGQIVAGAIGAAWVGFQCHMPAGVHLLACLLAAVVCGGI 207

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
            G  +   +      AT   +E+   I++ +         +             RS    
Sbjct: 208 YGFIAGFLK------ATTGANEVIMTIMLNFVATLGLAQLLTYQSFRRPGSGDPRSPTID 261

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                        +   ++     +  +  +L R+      R +  N  A  +   +I  
Sbjct: 262 ATAQLPETAPPFQINGGVVVAILTTIFVWWYLERSTWGFELRAVGANPDAAKTAGMSIGK 321

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
                  +S A  G+AG        +   D          I++ +L G         A  
Sbjct: 322 VTTVTLTLSGALCGLAGGVTMTGDLKYLTDDVAGDTGFDAITVALL-GRNRPMGTFFAGI 380

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +          M+      +       ++    +   A    +      
Sbjct: 381 LFGVFRAGGRTMDAQADVPIDMVLILQSVIVLLIAAPAFVRWLFRLPTG 429


>gi|160896605|ref|YP_001562187.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160362189|gb|ABX33802.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 309

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 94/305 (30%), Gaps = 16/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   +Y + A G  ++  + G+ +          A +           I +       +
Sbjct: 12  LMVGTLYALIAIGFVLIFKASGVFNFAQGAMVLFSALAMARFSEWIPKWIGMEPGWFTNL 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT----NGKAGIYVADRLYF 158
              C  +  +  + +  + LA+  L+  E    ++            G      A     
Sbjct: 72  LAICVSLAIMVVVAWVIERLALRHLVNQEPITLLMATLGIAYLLDGLGPMIFGSAVYSIN 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G     +          V+      Y       L A++ ++ ++T    A R + D+ +
Sbjct: 132 VGMPKDPMFILEGLFQGGVLLSQEDLYAACIAALLVAALSVFFQKTKTGRALRAVADDHQ 191

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +    +  ++V+     + G  + +               +  + +VILGG+
Sbjct: 192 AAQSIGIPLSRIWVIVWSVAGGVALVVGIIWGSKLGVQYSLS---LVALKALPVVILGGL 248

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TSL        I+    +L            ++   ++ +             +L+R   
Sbjct: 249 TSLPGAIIGGLIIGVGEKLSEVYLGPMVGGGIETWFAYGLA---------LCFLLVRPQG 299

Query: 339 LLRLR 343
           L   +
Sbjct: 300 LFGDK 304


>gi|333023899|ref|ZP_08451963.1| putative ABC transporter permease [Streptomyces sp. Tu6071]
 gi|332743751|gb|EGJ74192.1| putative ABC transporter permease [Streptomyces sp. Tu6071]
          Length = 315

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/323 (13%), Positives = 100/323 (30%), Gaps = 25/323 (7%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + VV  L   L      SQ+ I  + +   I V+ A G ++VV     + L+      I 
Sbjct: 1   MLVVMLLATQLSHTGFLSQQGIKDLLLNATILVLVATGQAVVV-LTRNVDLSVGSVLGIS 59

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A++        G S W+ +  +  +    G++ G      +   L +    +  +     
Sbjct: 60  AFAAG-DYLHGGGSPWIAVLYAVAVGAVFGLLNGALVSLGKVPALVVTLGTLYIV----- 113

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
                           D ++     + +      F          + Y+ +    +  ++
Sbjct: 114 -------------RGIDSVWVGSRQIVAADLPDGFVDFGHDGVWAVPYLAVLALVVLLAV 160

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             WLR          +  + +A       +    L+A+ +     G+AGA + A    + 
Sbjct: 161 GYWLRHYRGGRELYALGSSPEAATLAGVAVRRRVLTAYVLCGVLAGLAGALYLARFGNVD 220

Query: 258 P-----DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
                         ++V  +   GG  ++   A    +L  +  +   +           
Sbjct: 221 SATGNGYELTVVSAVVVGGVAFTGGAGTVYGAALGALLLTSINSVLPAIGVNSVWVTAIN 280

Query: 313 DCSFNMRHTTLMVIALFLVILMR 335
                +      V+AL +  ++R
Sbjct: 281 GVLLLLAIAVDRVLALRVAAVLR 303


>gi|238789877|ref|ZP_04633658.1| Monosaccharide-transporting ATPase [Yersinia frederiksenii ATCC
           33641]
 gi|238722073|gb|EEQ13732.1| Monosaccharide-transporting ATPase [Yersinia frederiksenii ATCC
           33641]
          Length = 329

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 107/317 (33%), Gaps = 18/317 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L +++ +L    ++    L        +   I  +     +  + A GL IV+   G + 
Sbjct: 12  LKRHEVMLAFTILIISTYLAFTSPDFLTLANIYDLINNYAMLTILACGLFIVL-ISGGID 70

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++      I  Y  V L  ++G +  +   ++  I    G+I  L   + R   + I   
Sbjct: 71  ISFPAMTIISQYVMVTLIVKFGGNFPVAFALAGGIGLLLGLINALLVNRLRVPSIIITIS 130

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++  +  +L   + +       +          T                Y+  +   +
Sbjct: 131 TLNIFYGLLLYLSRGVWLYTYPEWFEHGPMLFSFTAAD------------GYDYGLSLPI 178

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +        L + RT+I      +  NQ+A   +  +I+  +L  +       G+AG 
Sbjct: 179 LTLLTTIIVTALLMTRTSIGRQIYALGGNQEAASRMGFSILKLQLFVYGYMGFLSGIAGV 238

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
             + +   ++PD     E  ++ ++V     I+GG  +L+       +L  +      + 
Sbjct: 239 VQSYTVLTVAPDSLLGYELTVLAAVVLGGTSIVGGRGTLTGTLLGVILLAILQNGLNLLG 298

Query: 303 FYYFNSLLKFDCSFNMR 319
              +   +       + 
Sbjct: 299 ISSYWHTVVIGLVIVIS 315


>gi|256394891|ref|YP_003116455.1| Monosaccharide-transporting ATPase [Catenulispora acidiphila DSM
           44928]
 gi|256361117|gb|ACU74614.1| Monosaccharide-transporting ATPase [Catenulispora acidiphila DSM
           44928]
          Length = 356

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/309 (13%), Positives = 91/309 (29%), Gaps = 22/309 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++ ++  +   L        + +  +  Q+ +    A G ++++ + G + L+      
Sbjct: 53  AIVLLLAGVTFALLNDRFYRLENLSLVAQQVAVVGSLAAGQTLIILTAG-IDLSVGAVMV 111

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     L S  G+   + + V A ++ A   + GL   K +     +    +S     
Sbjct: 112 LSSLVMAKLVSDQGVPGVVALLVGACVAVAAQAVNGLLVTKIKLPPFIVTLGTLSIFTAA 171

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            LI  K                     +              I  + +   +L M  L A
Sbjct: 172 TLIYAKG----------------QTIALHPDAFLLWSAKPVSIGSLHLTTGVLMMAVLYA 215

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I   LR T+          + +A      ++    LSA+ V+   I +A          
Sbjct: 216 VISFALRYTSWGRHLYATGGDPEAARLAGISVNRVLLSAYMVAGIAIAVAAWILVGRVGG 275

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P+    +    + ++VI      GG   +        I+           F     +L
Sbjct: 276 GDPNSGLNANLESITAVVIGGTSLFGGRGVVLGSLIGAFIVQVFDNGLALAGFDPNYQVL 335

Query: 311 KFDCSFNMR 319
                    
Sbjct: 336 AVGVLVIAA 344


>gi|221197675|ref|ZP_03570721.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia multivorans CGD2M]
 gi|221204767|ref|ZP_03577784.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia multivorans CGD2]
 gi|221175624|gb|EEE08054.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia multivorans CGD2]
 gi|221181607|gb|EEE14008.1| ABC branched chain amino acid family transporter, inner membrane
           subunit [Burkholderia multivorans CGD2M]
          Length = 311

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 97/312 (31%), Gaps = 22/312 (7%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +     L+  M + GL+++    G+L+      Y +GAY             W  + ++ 
Sbjct: 10  NGLSYGLLLFMLSAGLTLIFSVQGVLNFAHASFYMLGAYVGY--SIALRAGFWPALVLAP 67

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +  GA G       L+          L+++     ++ +   +  G A +       F G
Sbjct: 68  LAVGALGAACERTLLRRVQARGHTGELLLTFGLAYLIGEVAKLAWGLAPLPAPVPASFEG 127

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             V             +    +  +++     +  ++   LR + +    R    ++ A 
Sbjct: 128 APVT---------VFGLALPRYRLFMMTMSAAMLIALGALLRTSRLGLVVRAALTHRAAV 178

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +L   +       F   +A   +AG   A     +       +   +V ++V++GG+ S
Sbjct: 179 EALGYDVPRLMTLLFGAGTALAALAGVIGAPLA--VIEPALAETVGSVVFAVVVIGGLGS 236

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN---------MRHTTLMVIALFLV 331
           L     A+  +          +            +                +  + L  V
Sbjct: 237 LGGAFVASLAVGFAQTFAASSDVTLRTLAQAAGLALPDGVAAVSIAQLAPLVPYLLLVAV 296

Query: 332 ILMRSHSLLRLR 343
           ++ R   L   R
Sbjct: 297 LVARPRGLFGER 308


>gi|154496621|ref|ZP_02035317.1| hypothetical protein BACCAP_00913 [Bacteroides capillosus ATCC
           29799]
 gi|150274254|gb|EDN01345.1| hypothetical protein BACCAP_00913 [Bacteroides capillosus ATCC
           29799]
          Length = 354

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 97/294 (32%), Gaps = 11/294 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++ +V  + +     A  + + + ++      Y+  A G++  +   G   L+   A 
Sbjct: 29  LIIIMLVVAVYVAFTQPAFLTPRSLVNLLSLTAAYLPVALGIAGCIVLTG-TDLSAGRAV 87

Query: 75  AIGAYSYV-----ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
            I A            +         +P+  +I  A G+   + +              +
Sbjct: 88  GITACVSASLLQTTGAANKMWPNIGTLPIPVVILIAVGLGALIGAFNGFFVAKFKLHPFI 147

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
             +   +++    +   + G      +  L    R+ +       SF   +I +   ++ 
Sbjct: 148 VTLATQLILYTILLLYVQMGNNNGMAISSLDEGYRNFVVGDPPLLSFDGGKIQIPNYVIY 207

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              LSA +     +T        +  N++A       +    +  FA++ A  G AG   
Sbjct: 208 AVILSALMWFIWNKTTFGKNMFALGANEEAARVSGVNVFMTTILVFALAGAMYGWAGFVE 267

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +A     + +     E   + + VI     +GG+  +S +     +L  +    
Sbjct: 268 SARVASNTANTGVNYELDAIAACVIGGVSFVGGIGKISGVIIGVIMLRLIFVAL 321


>gi|327189559|gb|EGE56712.1| sugar ABC transporter, permease protein [Rhizobium etli CNPAF512]
          Length = 334

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 85/300 (28%), Gaps = 17/300 (5%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                     + ++  +     + A G + V+ S G L L+     A  A   ++L +  
Sbjct: 39  VNPNFIGITNLANVATRCAFIAIIAVGATFVI-SAGDLDLSVGSMVAFVASLMILLINSG 97

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            ++  +L+  +A++       +   +         I   I +     I            
Sbjct: 98  VIADPVLMLTAAVVFTVIAGALCGLANGLITTVGKIEPFIATLGTMGIYRGLTTW----- 152

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                        T+RS      +  ++    + +   ++ +  ++A     L RT    
Sbjct: 153 ------LSQGGAITLRSSDIQTLYRPAYFGNILGLPVPIVVILVVTAIAAFILYRTRYGR 206

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               +  N          +   +  AF +    + +A   +       S       E   
Sbjct: 207 HVVAVGSNSDVARYSGIAVNRVRTIAFVIQGLCVAIAVLLYVPRLGSTSATTGILWELQA 266

Query: 269 VISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           + ++V+      GG   +        IL  V  +    NF     +     +  +    +
Sbjct: 267 ITAVVVGGTALKGGAGRVWGTICGAFILELVGNIMLLSNFISEYLIGAIQGAIIIIAMLV 326


>gi|222081728|ref|YP_002541093.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726407|gb|ACM29496.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 293

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 94/305 (30%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+Y + A G  ++  + G+ +        + A ++ +     G+S W+   +
Sbjct: 8   LITGLFAGLMYGLVAIGFVLIYKASGVFNFAQGAMVFLSALTF-VTLVERGISFWVAFAI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +  A  + +    L+   +   +   + +     ++        G            
Sbjct: 67  TCGVMIATAVAIEALVLRPLRNRDPLTLFMATLGLSFVIEGATQFFLGTDVH-------- 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F     L +  L   + +   +T +  + R + D+  
Sbjct: 119 ---MLDIGIDDIASDFGGILISQFDIVASLIVVGLVIVLAIVFSKTRMGISLRAVADDTL 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +       ++V+     +AG  + A +             +  + ++I+GG 
Sbjct: 176 AAQSIGIRLPQIWRIVWSVAGIVALVAGLLWGARQGVQYSLS---LITLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S+        I+     L            +    +          I     +L+R   
Sbjct: 233 SSIPGAIVGGLIVGAAESLADIYIGPLVGGSVSTWFA---------YILAVAFLLVRPAG 283

Query: 339 LLRLR 343
           L   R
Sbjct: 284 LFGDR 288


>gi|239814754|ref|YP_002943664.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239801331|gb|ACS18398.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 290

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 95/305 (31%), Gaps = 22/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       ++  + A GL++ +G +  ++L        G Y  V    + G+     +P+
Sbjct: 5   LFDGIAYGMLLFVLAVGLAVTLGLMNFINLAHGAFAMAGGYLTVFAMQKLGVPFLACLPL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G ++     +       +  ++ S     + +       G +   +      
Sbjct: 65  AFIVVALAGALLERTLYRPMYGKPHLDQVLFSIGLAFMAVAAVDYFVGSSQQNIQLP--- 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                          +  +    +  +++     L+  + L L +T   +  R   D+ +
Sbjct: 122 ---EWLRGRTEVGDGALLLGMGHYRLFIIAVCAVLTVVLQLILSKTRFGSRLRAAVDDPR 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +    L  FAV S   G+ GA  A          F     I  + +V +GG 
Sbjct: 179 VAAGLGINVNIVFLLTFAVGSGLAGLGGALGAEILGL--DPTFPLKYMIYFLIVVSVGGT 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S++    A  +L                                + + + L+++ R   
Sbjct: 237 SSITGPLAAALLLGIADVAGKYFIPKMGA--------------FTVYLLMILILMWRPQG 282

Query: 339 LLRLR 343
           L   +
Sbjct: 283 LFTRK 287


>gi|190893489|ref|YP_001980031.1| sugar ABC transporter permease [Rhizobium etli CIAT 652]
 gi|190698768|gb|ACE92853.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           CIAT 652]
          Length = 334

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 84/300 (28%), Gaps = 17/300 (5%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                     + ++  +     + A G + V+ S G L L+     A  A   ++L +  
Sbjct: 39  VNPNFIGITNLANVATRCAFIAIIAVGATFVI-SAGDLDLSVGSMVAFVASLMILLINSG 97

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            +   +L+  +A++       +   +         I   I +     I            
Sbjct: 98  VIVDPVLMLTAAVVFTVIAGALCGLANGLITTVGKIEPFIATLGTMGIYRGLTTW----- 152

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                        T+RS      +  ++    + +   ++ +  ++A     L RT    
Sbjct: 153 ------LSQGGAITLRSSDIQTLYRPAYFGNILGLPVPIVVILVVTAIAAFILYRTRYGR 206

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               +  N          +   +  AF +    + +A   +       S       E   
Sbjct: 207 HVVAVGSNSDVARYSGIAVNRVRTIAFVIQGLCVAIAVLLYVPRLGSTSATTGILWELQA 266

Query: 269 VISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           + ++V+      GG   +        IL  V  +    NF     +     +  +    +
Sbjct: 267 ITAVVVGGTALKGGAGRVWGTICGAFILELVGNIMLLSNFISEYLIGAIQGAIIIIAMLV 326


>gi|157151647|ref|YP_001451154.1| permease protein [Streptococcus gordonii str. Challis substr. CH1]
 gi|157076441|gb|ABV11124.1| ABC transporter, permease protein [Streptococcus gordonii str.
           Challis substr. CH1]
          Length = 657

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 98/305 (32%), Gaps = 33/305 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S   Q L++ + A G+ I    L +  L    ++ +GA +  IL  +  L+       
Sbjct: 361 VLSALSQGLLWSIMAIGVFITFRILDIADLTAEGSFPLGAATTAILIMKG-LNPLFATIG 419

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +     G + G    K +   L    + ++ ++   L+         +G         
Sbjct: 420 GFIAGILAGAVSGFLHTKMKIPALLTGIITLTALYSVNLLVLGSSNLSLSGQ-------- 471

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 + +         +     +  + L        +++ L  T +  A R   DN  
Sbjct: 472 ------TTLVTMMTSLLSLSKTSSVIVLGLAFVAFVILLLIVLLNTQLGLALRATGDNLA 525

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +   K+  + +S+  I +AG+  A +      +M   +         I+ G+
Sbjct: 526 MGEANGIKVDRIKILGYMLSNGLIALAGSLLAQNNGYADMNMGTGT---------IVNGL 576

Query: 279 TSLSKIAKATAILIGVV------ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            S+     A  I+  +        +  G   Y    ++    + + +   L    L  +I
Sbjct: 577 ASI---ILAEVIVKYLPLGKRLWSIVVGSILYRLVLVVILAMNVDAQMLKLASAILLALI 633

Query: 333 LMRSH 337
           L    
Sbjct: 634 LYVPE 638


>gi|307301546|ref|ZP_07581306.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
 gi|306903603|gb|EFN34191.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
          Length = 287

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 86/303 (28%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y         GL     + ++
Sbjct: 9   VDALAYGMVLFVISIGLSVTLGLMRVVNLAHGAFAMIGGYIASYAARDLGLGYGAAVLIA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
              +    + +     +       +  ++M+      +I       G     +       
Sbjct: 69  VFGTIVIAIPIERLLYRRIYGQPELTQVLMTIGITFCIIGIANYVFGPTLKTIPLPPSLE 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G               F    +   + ++    ++ ++   + +TA     R   DN   
Sbjct: 129 G----------SADLGFRSIAVHRIFAIVCGLAVAGALWFAIEKTAFGVKLRAAVDNAAM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FAV+       G   A          +     +  + +V +GG  
Sbjct: 179 AAALGVRTEVVYAVSFAVAVGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L G+      +   +                    +A+  ++ +    L
Sbjct: 237 SIPGALAACLLLGGIDTTGRYLVPEFGE--------------FFFYLAVIAIVCVFPRGL 282

Query: 340 LRL 342
              
Sbjct: 283 AGR 285


>gi|295681379|ref|YP_003609953.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295441274|gb|ADG20442.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 336

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/330 (11%), Positives = 99/330 (30%), Gaps = 30/330 (9%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F+ +     +IL +  ++     F       +   + ++   I    + A+G  I++   
Sbjct: 23  FASQWAAELRILLVAVLLAAYFEFANHDFLLTNASLVNLSQFIAPVAIIAFG-EIMLMIG 81

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+  + +A   +   +  +  G  +WL +    + +G  G + G  ++  R     
Sbjct: 82  GDIDLSAGMVFAFAPFMM-VFANDAGAPMWLAVIAGLVAAGVVGFVNGAVTVWLRLPSFV 140

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
                                    G         L  +  +       P+   +   + 
Sbjct: 141 T----------------------TLGTLFLINGITLTISRGTPAPTPGSPAFAAVMGAWG 178

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           Y  ++    ++ ++ + LR T      +    N          +   +L  F +++   G
Sbjct: 179 YSEIIWTLVIAFAMHVLLRHTRWGLHTQAAGANPLGASEAGIHVKRLRLGNFILAAVLAG 238

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVEL 297
             G   A     I P         + ++  ++GG        ++       A+L  + + 
Sbjct: 239 FTGMLEAFRITSIDPQAGGNQIMFLAVAAAVIGGTPLTGGSGTIVGGLIGAAVLGILNDG 298

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              +    F   +    +        + + 
Sbjct: 299 FTLIGINAFTFNIILGAAILAAMIFNIHVG 328


>gi|55820299|ref|YP_138741.1| ABC transporter substrate binding/membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55736284|gb|AAV59926.1| ABC transporter substrate binding/membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
          Length = 659

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 91/308 (29%), Gaps = 34/308 (11%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
              + +   Q L++ + A G+ I    L L  L     + +GA +  I+  R        
Sbjct: 361 SNVVLTSISQGLLWAIMAIGVFITFRILDLADLTAEGTFPLGAATTTIMIIRGIN-PIFA 419

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
                +     G + G    K +   L    + ++ ++   L+         +G      
Sbjct: 420 TLGGFVAGMFAGAVSGFMHTKMKIPALLTGIITLTGLYSVNLLVLGSANISLSGHN---- 475

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                +     +  + L    L   +++ L  T +  A R   D
Sbjct: 476 -----------TLVTMVMGLGLSKLSGVILLGLIFVSLVVFMLVVLLNTQVGLALRATGD 524

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N     +    +   K+  + +S+  I ++GA  A +      +M   +    + +I   
Sbjct: 525 NLAMGEANGIKVDRMKILGYMISNGLIALSGALLAQNNGYADMNMGTGTIVNGLAAI--- 581

Query: 276 GGMTSLSKIAKATAILIGVV------ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
                      A  I+  +        +  G   Y    ++    + + +   L    L 
Sbjct: 582 ---------ILAEVIVKYLPLGKRLWSIVVGAVLYRLVLVMILAMNVDAQMLKLASAILL 632

Query: 330 LVILMRSH 337
            +IL    
Sbjct: 633 AIILYVPE 640


>gi|297623376|ref|YP_003704810.1| inner-membrane translocator [Truepera radiovictrix DSM 17093]
 gi|297164556|gb|ADI14267.1| inner-membrane translocator [Truepera radiovictrix DSM 17093]
          Length = 321

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/297 (10%), Positives = 79/297 (26%), Gaps = 27/297 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +     ++ + +   ++ A G++ V+   G + ++     A  A            
Sbjct: 24  PGFYNTSNALNLLVNMSYLMIAAVGMTAVI-LTGQIDISVGAILAACATVAGYSAKAGVP 82

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              + +   A  +    +   L +       +     +       ILI            
Sbjct: 83  IPAVFLLAVATGAALGAVNGALVAYVRVHSIVVTLATLAVVRGAIILITGGSWI------ 136

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                                F +      + +   +  M  ++      L  T    + 
Sbjct: 137 ---------------YDLPANFRALGTGTLLGVPIPVWLMAGVTLLGWYLLSHTRWGRSV 181

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  + +A       + + +LS F    A +G+A   FA     I  +     E +++ 
Sbjct: 182 YALGSSPEAARLAGIPVRWTQLSVFVFQGALVGVATMAFATRFTTIQSNTGSGFEFLVIT 241

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           ++V+      GG  +L        ++         +    F           +  T 
Sbjct: 242 AVVVGGTNIFGGSGTLLGTFLGALLVSATGTTLTFLRISAFWEGALQGLFILVSVTL 298


>gi|260222339|emb|CBA31804.1| hypothetical protein Csp_D28950 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 307

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 108/301 (35%), Gaps = 34/301 (11%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
              + ++++ A    ++ G   L+S+     + +GAY   +     G S +  +   A  
Sbjct: 4   LTTLFVFMLLASTWGLLAGQARLVSVGQQAFFGVGAYF-ALRLVDGGWSAYPALFAGAFG 62

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +    ++M    L+ +    AIAT +++E+ + +++    +                   
Sbjct: 63  AAVAALVMSFFVLRLKEGEFAIATWVIAEVIRILVMLNPMVQG----------------- 105

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                          +     +++ LG       + +W+ R+A+  A R I ++ +A  S
Sbjct: 106 ETGTSLLALNAVEPELRRNIGFWMALGSLAFMLGVTIWMMRSAVGTATRAIGEDDEAAAS 165

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFF-AASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           L   ++  +   + ++S    +AG  + A +   +    F    +++++ + ++GG+ S 
Sbjct: 166 LGVRVMSTRRWVYVLASLGAALAGVAWLATAITFLPRTNFGVQWSVLMLFMALVGGLRSQ 225

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                   +L  + E    +  +Y                  + +   +  L     L  
Sbjct: 226 WGPLLGALLLFVLQESIGHLGAWYLAG---------------LGVVAMVFALWLPRGLAG 270

Query: 342 L 342
           L
Sbjct: 271 L 271


>gi|222106259|ref|YP_002547050.1| ABC transporter membrane spanning protein (ribose) [Agrobacterium
           vitis S4]
 gi|221737438|gb|ACM38334.1| ABC transporter membrane spanning protein (ribose) [Agrobacterium
           vitis S4]
          Length = 348

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/326 (10%), Positives = 88/326 (26%), Gaps = 12/326 (3%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R       + +L     ++  L   A  +   + S+   + +  +   G+++ +   G 
Sbjct: 25  VRETIRRGAVFILLAGLIVIFSLAQPAFININNLMSILQAVAVVAIIGAGVTVTLAIGG- 83

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
             L+     A    +        GL+ +  +P+        G       +K +   L   
Sbjct: 84  FDLSVGAVAASSVMASSYAMIVLGLNAYQTVPLVLAFGALIGFANAFLIVKLKVPDL--- 140

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
              ++ +    L+    +            +   GTT                    + +
Sbjct: 141 ---LATLAMMFLLSGLQLIPTAGRSISVGLILPNGTTATGKYDPLFLTIGRSSLFGLIPF 197

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            ++ +  ++ ++ +   RT +         N+ A           K  A+ +S       
Sbjct: 198 PVILLAIVAVTLFVLTERTRLGRLLFATGGNEVATRLAGANTAKIKTFAYVLSGTLAAFG 257

Query: 246 GAFFAASRDRISPDMFKFSENIIVIS----IVILGGMT-SLSKIAKATAILIGVVELCCG 300
           G   AA   R             V +      +LG    ++         +  ++     
Sbjct: 258 GIIVAARVGRGDVSSGASLLMDSVAASLIGFAVLGLRRPNVLGTIIGAVFVGILLNGLTM 317

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVI 326
           +N  Y+                   +
Sbjct: 318 LNAPYYTQDFVKGFVLVGALALTYGV 343


>gi|221068590|ref|ZP_03544695.1| inner-membrane translocator [Comamonas testosteroni KF-1]
 gi|264677220|ref|YP_003277126.1| inner-membrane translocator [Comamonas testosteroni CNB-2]
 gi|299530764|ref|ZP_07044179.1| inner-membrane translocator [Comamonas testosteroni S44]
 gi|220713613|gb|EED68981.1| inner-membrane translocator [Comamonas testosteroni KF-1]
 gi|262207732|gb|ACY31830.1| inner-membrane translocator [Comamonas testosteroni CNB-2]
 gi|298721280|gb|EFI62222.1| inner-membrane translocator [Comamonas testosteroni S44]
          Length = 294

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 104/303 (34%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +    Y + + GL+++ G L +++      + +GA    +  S +G++ W+++ +
Sbjct: 15  LLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMCTWMAMSYFGINYWVMLIL 74

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++ G  G+++    L++      +  L+++     ++        G +G         
Sbjct: 75  SPVLVGILGVLIERFLLRWIYKLDHLYGLLLTLGLSLLIEGVFRSVYGVSG--------- 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +        F+I   +  +V++    +  +    + +T I    R   +N +
Sbjct: 126 -LGYDTPELLEGATNLGFMILPNYRAWVVVASIVVCVATWFVIEKTRIGAYLRAGTENPR 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +       +A  +A    AG   A                +  + +  +GGM
Sbjct: 185 LVEAFGVNVPVMITLTYAFGAALAAFAGVLAAPVYQVTPLMGQNLIIVVFAVVV--IGGM 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+         L  +  L                  +    +T++   + +V+L+R   
Sbjct: 243 GSIMGSILTGLALGVIEGLTKVF--------------WPEASSTVVFFIMVIVLLIRPAG 288

Query: 339 LLR 341
           L  
Sbjct: 289 LFG 291


>gi|312198719|ref|YP_004018780.1| inner-membrane translocator [Frankia sp. EuI1c]
 gi|311230055|gb|ADP82910.1| inner-membrane translocator [Frankia sp. EuI1c]
          Length = 314

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/310 (10%), Positives = 82/310 (26%), Gaps = 24/310 (7%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY--SYVILGSRYGLSIWLLIPVSA 100
                +Y + A G ++V G L L++      + +GA+   +       G +     P   
Sbjct: 15  LTVGALYAVIALGYTLVYGVLQLINFAHSEVFMLGAFGGLFAARAFVPGGAGGAGAPPGG 74

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           + +     +  +                     +              G  +        
Sbjct: 75  LAAVGLVAVGLVAGGLAGALAALALERAAYRPLRRRGAPRLAYLISAIGASMFAFNLAGK 134

Query: 161 TTVRSLIRFFRFPSSFVIYEI-------FMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
              R  +          ++ +           +      +   +   +R T +  + R +
Sbjct: 135 EFGRQNVPVPALFRDGTVFRVAGASVSTLTLVIGATALAMLLVVDRLVRATRLGQSIRAV 194

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            ++ +    L   +    ++ F +     G  G  +A + +        F   I   +  
Sbjct: 195 AEDAETATLLGVDVDRVIVATFVLGGLLAGAGGFLYAMTFNA--SYTMGFVPGIKAFTAA 252

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +LGG+ ++        +L  V      +    +  ++ F     +               
Sbjct: 253 VLGGIGNVRGAVLGGLLLGVVESFGGYLLEASYKDVIAFVVLVGVLLL------------ 300

Query: 334 MRSHSLLRLR 343
            R   LL  R
Sbjct: 301 -RPSGLLGAR 309


>gi|163760921|ref|ZP_02168000.1| ribose ABC transporter, permease protein [Hoeflea phototrophica
           DFL-43]
 gi|162281965|gb|EDQ32257.1| ribose ABC transporter, permease protein [Hoeflea phototrophica
           DFL-43]
          Length = 373

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/328 (14%), Positives = 109/328 (33%), Gaps = 28/328 (8%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFL---GATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           F+ RL  Y  I+  + ++  +L+F+ +           ++ + +   +Y+  A  ++ V+
Sbjct: 11  FTERLEPYIAIIGPMVMILAILVFMGIVEPARYFRATNLNLILLDAALYMPMAMAMTFVI 70

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
              G + L+     A+ A     L  +YG S+++ +P++  +    G++ GL   +F   
Sbjct: 71  TQRG-IDLSIGSIAALSAIIMAFLIKQYGFSVYVAVPIAIALGAVMGLVNGLIITRFNVP 129

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
            L     +        L+  K +                   V +    F          
Sbjct: 130 DLIGTLAMDLVYRGFALVLAKGL-------------------VLARFPDFLTDMGRGQIP 170

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
            F+   +L          + L+RT        I  N +A      ++   K+ A+ +  A
Sbjct: 171 GFVPIPVLIGLATMIGGYILLKRTYFGRYTVAIGSNPEAAELTGISVNRHKVYAYVLCGA 230

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVV 295
              +AG       + I      +    ++ ++V+      GG  S+        +L  ++
Sbjct: 231 CAALAGVMLTGKLNAIQATSAPYFNLHVIAAVVVGGTSLFGGRASIIGSFAGVLLLSMMI 290

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
                +   +F   +             
Sbjct: 291 NALVTLRIEFFWQSVASGVVIISSVALY 318


>gi|154503214|ref|ZP_02040274.1| hypothetical protein RUMGNA_01038 [Ruminococcus gnavus ATCC 29149]
 gi|153796208|gb|EDN78628.1| hypothetical protein RUMGNA_01038 [Ruminococcus gnavus ATCC 29149]
          Length = 335

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/285 (12%), Positives = 88/285 (30%), Gaps = 23/285 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           ++  +   +  S   I SM     ++ + A G  +V+ + G + ++   + ++       
Sbjct: 30  IIAAIVTPSMYSLNSILSMLQNNAVFGLLALGEMVVIITAG-IDISIGASLSLAGVVCCR 88

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
             +       ++  V AM+ GA    +    + +      IATL    IF+ +       
Sbjct: 89  FMAENPEIPAVVWVVVAMLVGALCGAINGILVGYLKMVPMIATLGTMYIFRGL------- 141

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
                       L   G           + +  +     +  +L  +       +L+L  
Sbjct: 142 ----------SFLLSDGEWWFPHQFTEGYQAFAIKKIAGVPSILWILVLAFILAVLFLGY 191

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T+       I  N+++              A  +   F G++G  + A+    S  +   
Sbjct: 192 TSRGRRIYAIGTNRESAQIAGIKEQRVIFLAMTICGMFAGLSGMLYTANYATCSYMIGDS 251

Query: 264 SENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNF 303
            E   +   +     I GG   +  +     ++  +      +  
Sbjct: 252 YEMTAIAICILGGVSITGGKGKVDGVIIGFLMMSVITYFISLLPG 296


>gi|56695921|ref|YP_166272.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56677658|gb|AAV94324.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 346

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/344 (13%), Positives = 99/344 (28%), Gaps = 52/344 (15%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI--------------- 83
           I +   +   Y + A GL+++ G+LG+++      + IGA+  V+               
Sbjct: 11  ILNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFCAVMLQRILNLSFQTIDET 70

Query: 84  ------------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
                                     +    S+ L +  +  I    G  M    +K   
Sbjct: 71  QKDFLGNPLKVDTPYVHSWFGPETGAAIIDWSVPLAVIFAIPIMLFIGYAMERGLIKHFY 130

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
                  ++++     +L +      G   I   +     G+    L+    F  + +IY
Sbjct: 131 KRPHADQILVTFGLAIVLQEIIKYFFGANPIQTPEPSALKGSLDIGLM--LGFDPNAIIY 188

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
            I+          +   +  +L+ T      R    +++    L   I       F +++
Sbjct: 189 PIWRLVYFAFAAVIIGGVFAFLQFTTFGMVVRAGMADRETVGLLGINIDKRFTIMFGIAA 248

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
              G+AG  +             F     V+ +V    M SL     A  +L  +     
Sbjct: 249 GVAGLAGVMYGPLNPPNYHMGMDFLVLSFVVVVVGG--MGSLPGAVAAGFLLGVLESFAS 306

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                     +     + +    L+          R   LL  +
Sbjct: 307 TTWATTTIPGINQIIIYLVAIIILLT---------RPRGLLGRK 341


>gi|319792602|ref|YP_004154242.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315595065|gb|ADU36131.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 290

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 95/305 (31%), Gaps = 22/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       ++  + A GL++ +G +  ++L        G Y  V    + G+     +P 
Sbjct: 5   LFDGIAYGMLLFVLAVGLAVTLGLMNFINLAHGAFAMAGGYLTVFAMQKLGMPFLACLPF 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++    G ++     +       +  ++ S     + +       G +   +      
Sbjct: 65  AFIVVALAGALLERTLYRPMYGKPHLDQVLFSIGLAFMAVSAVDYFVGSSQQNLQLP--- 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                      F   +  +    +  +++     L+  + L L +T   +  R   D+ +
Sbjct: 122 ---EWLRGRSEFGDGAFLLGMGHYRIFIIAVCAVLTVVLQLILSKTRFGSRLRAAVDDPR 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +    L  FAV S   G+ GA  A          F     I  + +V +GG 
Sbjct: 179 VAAGLGINVNIVFLMTFAVGSGLAGLGGALGAEILGL--DPTFPLKYMIYFLIVVSVGGT 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S++    A  +L                                + + + L+++ R   
Sbjct: 237 SSITGPLAAALLLGIADVAGKYFIPKMGA--------------FTVYLLMILILMWRPQG 282

Query: 339 LLRLR 343
           L   +
Sbjct: 283 LFTRK 287


>gi|121605623|ref|YP_982952.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120594592|gb|ABM38031.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 290

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 99/305 (32%), Gaps = 22/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       ++  + A GL++ +G +  ++L        G Y  V+L  R+G+   L +P+
Sbjct: 5   LFDGIAYGMLLFILAVGLAVTMGLMNFINLAHGAFAMAGGYITVLLMQRFGVPFLLCLPL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + S   G ++     +       +  ++ S     + +       G     +    + 
Sbjct: 65  AFIGSALLGGVLERTLYRPLYHKPHLDQVLFSIGLVFMAVASVDYFVGSTQQIIQLPEWL 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G T      +       +    +  +++     L+  +   L  T   +  R   D+Q+
Sbjct: 125 KGRTELGSGAWM------LGMGHYRLFIIAVCAALTVGLQYVLGYTRFGSRLRASVDDQR 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +    L+ FAV S   G+ GA  A          F     +  + +V +GG 
Sbjct: 179 VAAGLGINVNMVFLTTFAVGSGLAGLGGALGAEVLGL--DPSFPLKFMVYFLIVVAVGGT 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S++                         + +            ++   +  +++ R   
Sbjct: 237 SSITGP--------------LLAALLLGIADVAGKYYIPKLGAFIVYSLMIAILIWRPQG 282

Query: 339 LLRLR 343
           L   +
Sbjct: 283 LFVRK 287


>gi|228476522|ref|ZP_04061212.1| ABC transporter substrate binding/membrane-spanning protein
           [Streptococcus salivarius SK126]
 gi|228251943|gb|EEK10989.1| ABC transporter substrate binding/membrane-spanning protein
           [Streptococcus salivarius SK126]
          Length = 646

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 92/308 (29%), Gaps = 34/308 (11%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
              + +   Q L++ + A G+ I    L L  L    A+ +GA +  I+  R        
Sbjct: 348 SNVVLTAISQGLLWAIMAIGVFITFRILDLADLTAEGAFPLGAATTTIMIIRGIN-PIFA 406

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
                +     G + G    K +   L    + ++ ++   L+         +G      
Sbjct: 407 TLGGFVAGMLAGAVSGFMHTKMKIPALLTGIITLTGLYSVNLLVLGSANVSLSGHN---- 462

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                +     +  + L    L   +++ L  T +  A R   D
Sbjct: 463 -----------TLVTMVMDLGLSKLNGVILLGLIFVSLVVLMLVVLLNTQVGLALRATGD 511

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N     +    +   K+  + +S+  I ++GA  A +      +M   +    + +I   
Sbjct: 512 NLAMGEANGIKVDRMKILGYMISNGLIALSGALLAQNNGYADMNMGTGTIVNGLAAI--- 568

Query: 276 GGMTSLSKIAKATAILIGVV------ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
                      A  I+  +        +  G   Y    ++    + + +   L    L 
Sbjct: 569 ---------ILAEVIVKYLPLGKRLWSIVVGAVLYRLVLVIILAMNVDAQMLKLASAILL 619

Query: 330 LVILMRSH 337
            +IL    
Sbjct: 620 AIILYVPE 627


>gi|209546700|ref|YP_002278618.1| monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209537944|gb|ACI57878.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 348

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 97/322 (30%), Gaps = 21/322 (6%)

Query: 10  KYDKILCLLAVVYPLLLFLF----LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++  ++ L+ V    ++F      +        I ++   +    + A G++ V+ + G 
Sbjct: 27  RFQSLIGLVLVFAGGIIFSPRRHGVILFIQPDNIANIVRAVSETGIIAIGMTFVIITAG- 85

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+      + +     L    G  +   +    ++    G++ G  S KFR +   + 
Sbjct: 86  IDLSVGATLGLASVVTATLMVSGGFGLITTVLAVLLMGTCFGLVQGAISSKFRLEAFIVT 145

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L   +        +     +         L           ++   +  
Sbjct: 146 -----------LAGLQAARGLALVVSGNQYINISYGDGPGLAPPIFAVLGGRLFGNVVPV 194

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
             +     +    L L  T        +  N++A       +   K++ +A++     +A
Sbjct: 195 ATIVFLIFACIATLVLNTTRFGRYVYAVGGNERAARISGVPVSAIKIAVYAITGFASALA 254

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G   A   +  S +     E   + ++VI      GG  S+      T +L  +  +   
Sbjct: 255 GIVHAGQFNFGSANDGTGYELTAIAAVVIGGTSLFGGSGSMVGTIAGTIMLGALANILQL 314

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
            N      LL       +    
Sbjct: 315 NNITPAMQLLATAAIIVLAAVL 336


>gi|154247982|ref|YP_001418940.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154162067|gb|ABS69283.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 291

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 80/308 (25%), Gaps = 26/308 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +YI S      IY + A G  I+  S   ++        IG    V L +         +
Sbjct: 6   QYILSGLAIGGIYALVALGFHIMWSSAKAVNFAHGDTLMIGGLLAVYLLAAGLPLGLACL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                      ++  +    F     ++  ++ +     ++  +  I             
Sbjct: 66  AAVVAGGLFGLVLERIAVRPFLSQQGSVGWMLTTIAVGIMVESFATIQ-----------T 114

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + S                    + L        +    R T +  A R +  N
Sbjct: 115 QGYARPLPSPGVASSVHILGAGIYPQELVIPLVAVVAMLGLRALQRHTLVGRAMRAVAHN 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +      +FA++      AG   A                +   ++ I+G
Sbjct: 175 KNAAALMGINVNAVVAFSFALAGLLGAAAGVLVAPVVQA--SAAMGVLPGLKGFAVAIIG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+TS   +     +   + +   G                      +    + L +L+  
Sbjct: 233 GITSAPGVVITGLVYGVMEKFVEGYIS-------------TAAREIIGFSLMILTLLVFP 279

Query: 337 HSLLRLRT 344
             L   R 
Sbjct: 280 QGLFGKRE 287


>gi|301058597|ref|ZP_07199602.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
 gi|300447329|gb|EFK11089.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
          Length = 288

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 96/307 (31%), Gaps = 27/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I  ++  + A G ++V G   + +      Y +  +   I      L+  L I V
Sbjct: 4   LIYGIINSIMLALMALGFALVYGISRVPNFAHGAIYVLCGFLTWIFVRSLDLNYLLGILV 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++G  G +M    L           +    I   IL   +               + 
Sbjct: 64  ALVLTGILGALMYRFVLIRVRGMNISEIIASYAIGLAILEGLRY------------GGFK 111

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T    +          +  +     V+L    L A + L+   T I  A R +  +++
Sbjct: 112 GTTHTLPVFVEGSIIIGDIPVDYQRILVVLIGVLLVAFLWLFTHYTRIGLALRGMAQDER 171

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L        L A A      G+A        + +    +     I  I++ I+GG+
Sbjct: 172 AALMLGIDSDTMALVAMAFGCMLAGLAAILLLPLGNIVVEKGYDVL--IQAIAVCIVGGL 229

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S      A  ++     L       +F                + ++A+ + ++++   
Sbjct: 230 GSWMGAVLAAFLIGFAQILTTVYLGSHF-------------QMVVALLAIIVTLILKPSG 276

Query: 339 LLRLRTP 345
           L   +  
Sbjct: 277 LFGQQKE 283


>gi|294498023|ref|YP_003561723.1| ribose ABC transporter permease RbsC [Bacillus megaterium QM B1551]
 gi|294347960|gb|ADE68289.1| ribose ABC transporter, permease protein RbsC [Bacillus megaterium
           QM B1551]
          Length = 344

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/315 (11%), Positives = 89/315 (28%), Gaps = 13/315 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L+  +  ++  +      + + I  +   I I  + A G++I +   G L L+      
Sbjct: 29  VLMIFIIMIIFSIATPNFLTGENISDILRSISIVTLIALGVTISLTVNG-LDLSVGSTAG 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +   +   I + I V  + S   G++     +K +   +             
Sbjct: 88  LATILSASMLVLHRQEIAVAIIVPIIASLLIGLVNAFLVVKVKIPDILAT-------LSM 140

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + I    +     G  +   +          I    F +    + + +   ++ M     
Sbjct: 141 MFIVQGILLTYTKGSAIYTNMPLPSGDRAPGIFIPSFLALGQGHFLGIPVPVIIMLLTVL 200

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + +    T     +     N +A       +   ++ A+  S    G+ G   AA    
Sbjct: 201 LVHIVFSYTKFGRFFYVTGGNIEAARLSGVPVNRYRMYAYMFSGLLAGIGGVVLAARIGV 260

Query: 256 ISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
              +         V +      V   G  ++      + ++  ++     +N  Y+   +
Sbjct: 261 GEVNAGSPFLMDAVAATYIGFSVFGAGKPNVFGTLIGSILIGVLLNGLTMLNVPYYMQDI 320

Query: 311 KFDCSFNMRHTTLMV 325
                          
Sbjct: 321 IKGAVLAGALALTYY 335


>gi|284042923|ref|YP_003393263.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283947144|gb|ADB49888.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 373

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 94/290 (32%), Gaps = 28/290 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             + +V  + + +      +++ + ++G Q  I    A G  +V+   G + ++     A
Sbjct: 37  LFILLVVAVAMAILAPYFLTERNLQNLGAQTSIIAALAVGQLLVIVVRG-IDISVGATVA 95

Query: 76  IGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           +       I  + +G S ++++    ++  A G       +K R     I T+    I +
Sbjct: 96  LTGVLGAEIATTSWGSSSFVVVVAMLLVGLAVGTANAFLIVKGRLLQPLIVTVATLGIVR 155

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I +                    +   V          S    +   +   ++ +  ++
Sbjct: 156 GIAL-------------------VVSDGVTVNGMPGAVVSLGNGFVGPLPASVVLVGAVA 196

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + + + RT     +  +  N +    L        +SA+ V      +AG   A   +
Sbjct: 197 LVVYVLMSRTQWGRWFYAVGGNPEGADRLGVPSKRVVMSAYMVCGVTAAIAGLIVAGRTN 256

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELC 298
             S         +  I+ V++      GG  ++  +     IL  +    
Sbjct: 257 AGS-PSAGTLMELDAITAVVIGGASLAGGRGTVGNVLAGALILGIIRNGL 305


>gi|260466918|ref|ZP_05813101.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
 gi|259029314|gb|EEW30607.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
          Length = 333

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 89/314 (28%), Gaps = 25/314 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              +L +   V  ++  L      S     ++G Q  +  + A G++ V+     + L+ 
Sbjct: 34  RPYMLYVAFAVMLIVFSLASPWFLSIDNFLNIGRQTTLVSIIAVGMTFVI-ISRQIDLSV 92

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A+   S  +  +    +  +            G+I G+ + +              
Sbjct: 93  ASTLALSGMSASLAMAFLANNWVVGAVAGLGTGALIGLINGVLTTRLEIPSF-------- 144

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                       +T G         L    T    +   + F        + +   +L  
Sbjct: 145 -----------LVTLGTLSAARGLALMVTNTKPVIITNEYYFAIFGEGSVLGIPAPILWT 193

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++ + IL L  +           N  A       I      AF ++    G+A    +
Sbjct: 194 LGVTVAGILLLHYSVYGRRVYAAGGNPTAALYSGVHIKQVTTLAFVLTGTLAGLASLILS 253

Query: 251 ASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A      PD+ +  E  ++ S++     + GG   +      + I+  +      +    
Sbjct: 254 ARSHAARPDVVQGMELDVIASVILGGCSLFGGRGFVLGTLLGSLIIGTLNNGLVLLGVSS 313

Query: 306 FNSLLKFDCSFNMR 319
              L+         
Sbjct: 314 SLQLVIKGAIIVAA 327


>gi|167717420|ref|ZP_02400656.1| ABC transporter, permease protein [Burkholderia pseudomallei DM98]
          Length = 323

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 59/325 (18%), Positives = 115/325 (35%), Gaps = 23/325 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L+A +  L     +    +  Y        L   + A G++++   LGL+ L+      +
Sbjct: 1   LVATLGTLAAIALVVPAVADAYWIKTLTSALTVSIAAAGVALLYRQLGLVCLSQHALLGV 60

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G +   +  +  G    L +   A    A GMI GLP+L+ RG YLA+ TL+M+  FQ +
Sbjct: 61  GGWI-ALRLAHLGAPFELCVLAGAAGGSAIGMIAGLPALRLRGLYLALVTLMMAGGFQVV 119

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           +        G                +    R           +   +  +     L+ +
Sbjct: 120 VSAIGFPDGGGG----------FTGHLSFGARQMMARPLVGQSDAAYFRYVAAWAALAFA 169

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +I   RR+    +W  IR  +    +    ++F +  AF ++    G++G   A S  ++
Sbjct: 170 LIELHRRSKAGRSWALIRRGEMPALAAGVNVVFYQTWAFGLAGLLAGLSGGLLAGSVGQL 229

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
               F  SE++++ ++ ++GG+           +L  V  L                   
Sbjct: 230 DGRAFAASESVLLFALSVVGGVYHWFGALITGLLLRAVPALLTDFG------------VN 277

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                     AL   ++     +  
Sbjct: 278 GYLAMIFFGAALLHALVTAPAGIAG 302


>gi|121606419|ref|YP_983748.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120595388|gb|ABM38827.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 294

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 96/265 (36%), Gaps = 12/265 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +    Y M + GL+++ G LG+++      Y +GA++  I+  ++G++ W  + +
Sbjct: 15  LLLGLVNGAFYAMLSLGLAVIFGLLGVVNFAHGALYMLGAFAAWIMLDKFGINYWFALVL 74

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +  GA G+++    LK       +  L+++     I+        G +G         
Sbjct: 75  APLAVGAFGVVIERLFLKHLYKLDPLYGLLLTFGLALIVEGVFRELYGASGQTYPVP--- 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +        F++   +  +V+     +       + RT +    R   +N  
Sbjct: 132 -------ELLAGATNLGFMVLPNYRAWVVAVSLAVCLGTWFIIERTRLGAYLRAGTENAA 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +    +  +   +A   +AG   A         +   +  I+V ++V++GGM
Sbjct: 185 LVQTFGINVPMMVMLTYGAGAALAALAGVLAAPIIQV--NPLMGSNLIIVVFAVVVIGGM 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNF 303
            S+         L  V  +      
Sbjct: 243 GSILGSVVTGLALGLVEGMTRVFYP 267


>gi|327393678|dbj|BAK11100.1| ribose transport system permease protein RbsC [Pantoea ananatis
           AJ13355]
          Length = 355

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 87/312 (27%), Gaps = 10/312 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      + +    +   +  M   + I  + A G+++V+   G + L+      
Sbjct: 17  FIALLIVVGFFSVMVPNFLTPSNMLIMTQHVAITGLLAIGMTLVI-LTGGIDLSVGAVAG 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I      ++      S   L   + +      +I+ +         +    +    +   
Sbjct: 76  I----CGMVAGALLTSGVPLWNGARLFLNVPEVILTVALFGTLVGIVNGTIITRLGVAPF 131

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I           A +   D   +        +    F        + ++  +  M     
Sbjct: 132 ICTLGMMYVARGAALLFNDGATYANLVGMPALGNTGFALLGSGTVLGVFIPIWLMIGFLL 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +   R+T +         N+ A       II  K+  +A S    G+ G   A+    
Sbjct: 192 LGLYLTRKTPLGRYIYATGGNESAARLAGVPIIKVKVFVYAFSGLCAGLVGLVVASQLQT 251

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + V     + GG   +S       +++ + +    M    F  ++
Sbjct: 252 AHPMTGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFLADGMVMMGVSDFWQMV 311

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 312 IKGVVIVTAVVI 323


>gi|261419165|ref|YP_003252847.1| inner-membrane translocator [Geobacillus sp. Y412MC61]
 gi|297530865|ref|YP_003672140.1| inner-membrane translocator [Geobacillus sp. C56-T3]
 gi|319765982|ref|YP_004131483.1| inner-membrane translocator [Geobacillus sp. Y412MC52]
 gi|261375622|gb|ACX78365.1| inner-membrane translocator [Geobacillus sp. Y412MC61]
 gi|297254117|gb|ADI27563.1| inner-membrane translocator [Geobacillus sp. C56-T3]
 gi|317110848|gb|ADU93340.1| inner-membrane translocator [Geobacillus sp. Y412MC52]
          Length = 337

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 103/320 (32%), Gaps = 15/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L K+  +L +LAV+    +        + +    +   I I  + A G++  +   G   
Sbjct: 22  LYKHGTLLAILAVIAYFGI--TQDRFFTYENFSDILRSISIVTLVAIGITFSLIVDG-FD 78

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     ++   +       Y   I++ + V  ++  A G++  L  +KF+   L +ATL
Sbjct: 79  LSVGSTVSLATIASAAALVLYRQEIFITLLVPLLLGIAVGLLNSLLIVKFKLPDL-LATL 137

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                   + + +        G  + + +               F          + + +
Sbjct: 138 ATMYAINGVQLTYTK------GFSIYNDMPLPDGGTAPGKFIPSFLFIGQGELFGVPFSV 191

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L M F+  +  L+L  T     +    +N++A       +   +  A+ +S  F  + G 
Sbjct: 192 LLMLFVVIAAHLFLTYTKPGRLFYLTGENREAARLSGIPVNRYRTYAYVISGFFAALGGI 251

Query: 248 FFAASRDRISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMN 302
             A+                 V +      V   G  ++      + ++  ++     MN
Sbjct: 252 VLASRIGTGQVSAGASLLMDSVAAAYIGFSVFGAGKPNVIGTLFGSILMGVLLNGLTMMN 311

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
             Y+   +            
Sbjct: 312 VPYYAQDIIKGAILVGALAL 331


>gi|39934061|ref|NP_946337.1| urea/short-chain amide transport system permease [Rhodopseudomonas
           palustris CGA009]
 gi|192289588|ref|YP_001990193.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|39647909|emb|CAE26429.1| possible urea/short-chain amide transport system permease protein
           [Rhodopseudomonas palustris CGA009]
 gi|192283337|gb|ACE99717.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 288

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 75/268 (27%), Gaps = 11/268 (4%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               ++    + GLSI++G + +++L       IG Y         G+S  + I ++ + 
Sbjct: 12  LAYGMVLFTISIGLSIMMGLMRVVNLAHGAFAMIGGYLASFALVSLGVSYPIAILIAVIG 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +    +       +         T I+  I     I                    L   
Sbjct: 72  AVIISVPFEFLLYRRIYRRSDELTQILLTIGITFFIVGIANYIFGPTSKPIPLPEMLKGP 131

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                        F +      +V+      + ++ L + +T      R   DN     +
Sbjct: 132 FD---------LGFRMIPAHRLFVIGCGVVTAVALWLLIEKTEFGVRLRAAVDNGDMAEA 182

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L           FA++       G   A          +     +  + +V +GG  S++
Sbjct: 183 LGIRTQIVYSVTFALAVGLAAFGGVVGAELLPV--EPFYALRYMVTFLVVVSVGGAGSVT 240

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLL 310
               A+ +L         +   +     
Sbjct: 241 GAMAASLLLGLADTTGKYLAPEFGEFFF 268


>gi|255281960|ref|ZP_05346515.1| ribose ABC transporter, permease protein [Bryantella formatexigens
           DSM 14469]
 gi|255267633|gb|EET60838.1| ribose ABC transporter, permease protein [Bryantella formatexigens
           DSM 14469]
          Length = 346

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/310 (12%), Positives = 103/310 (33%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ +V  L+  L          + ++  Q+ + ++ A+G  I++   G L L+     
Sbjct: 30  IFIVLIVMFLVCSLLSPYFLKTNNLMNIARQLCVGILIAYGEMILI-VSGFLDLSVGSVL 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+     V      G      + ++ +++   GM   L +  F   +   A +    + Q
Sbjct: 89  ALAGVLSVACYKATG-----SMALAILVALLVGMACNLFNGIFVAQFEVPAFIATLGMQQ 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                    T G                   +++  ++ +       FM   ++ +  ++
Sbjct: 144 IARGIALYFTGGAN-----------------ILQIGKYVNIGQGMIGFMPVPVIIVIVIT 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++      T+   +   I  N+KA  +           ++ ++    G+AG  F A  +
Sbjct: 187 IAVWYMFNHTSYGRSLYAIGGNRKAAEASGINGKLVIYKSYLINGMLAGLAGVIFMARNN 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E   + + ++      GG+ ++        I+  +  +   +    +   
Sbjct: 247 SGLPNGAVGYEMTGLTAAIVGGTSFSGGVGTVMGTVAGAFIIGILENIMNLLGVNSYIQN 306

Query: 310 LKFDCSFNMR 319
           +       + 
Sbjct: 307 IIEGAIIVIA 316


>gi|238755690|ref|ZP_04617024.1| Monosaccharide-transporting ATPase [Yersinia ruckeri ATCC 29473]
 gi|238706057|gb|EEP98440.1| Monosaccharide-transporting ATPase [Yersinia ruckeri ATCC 29473]
          Length = 308

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 87/292 (29%), Gaps = 18/292 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  + L L      +   +  +     I  + A GL  VV   G + ++     AI  Y
Sbjct: 1   MLLAIGLSLKSPEFLTLGNLTDVATSYAILGILACGL-FVVLIAGGIDISFPAVTAIAQY 59

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                   +G S  L   ++  +    G++ GL     +      A +I           
Sbjct: 60  VMASWVITHGGSFPLAFVLAMTVGLVLGLVNGLLVYWLKV----PAIIITIATLNLFYGL 115

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
               TNG       D                   +    Y+  +   L  +        +
Sbjct: 116 LVYFTNGTWLYGFPDWFMTGINWFS--------FTGNDGYDYGLTLPLFCLAATIIFTGV 167

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  T +      +  N+ A   L   I+   L  +       G+A    A     ++P+
Sbjct: 168 LMNYTRLGRQIFAMGSNKDAASRLGINILRLHLYVYGYMGLLAGVAAVVQAQISQSVAPN 227

Query: 260 MFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                E  ++ ++V     + GG  +L+       +L  +      ++   +
Sbjct: 228 SLMGFELTVLAAVVLGGTSMSGGRGTLTGTVLGVMLLAFLQNGLTLLSVSSY 279


>gi|325264887|ref|ZP_08131615.1| ribose ABC transporter, permease protein [Clostridium sp. D5]
 gi|324029876|gb|EGB91163.1| ribose ABC transporter, permease protein [Clostridium sp. D5]
          Length = 353

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 90/273 (32%), Gaps = 24/273 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            +  + K I  M     + ++ A G+ + +  +G + ++   + A+   +  +L     +
Sbjct: 58  PSFMTYKSIIDMLRNNTVTMIMAVGM-LGILLVGGIDISVASSLALSGMTAGMLMKYGVV 116

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
               L+ + AM  G    ++    +        IAT+    +++ +              
Sbjct: 117 KNVFLLFLIAMAIGGLCGLINGLVISRGKVLPIIATMGAMYVYRGLAY------------ 164

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                         S      F S  +     + YV+  +  + A   + ++ T +    
Sbjct: 165 ------LVANNEWVSAEDLGTFSSFALDKFWGINYVIWVLIGVYALFFVMMKWTRLGRKV 218

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N++A       I   +L  + +     G+ G    +      P+M    E  I+ 
Sbjct: 219 YAVGSNKEAASISGINISNVELFVYVIMGILAGICGTIAVSVYSSAQPNMLYGKEMDIIA 278

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           + VI      GG  S++       +L  + +  
Sbjct: 279 ACVIGGVSMSGGRGSVAGALLGGLVLAVIAKAL 311


>gi|288919442|ref|ZP_06413774.1| inner-membrane translocator [Frankia sp. EUN1f]
 gi|288349136|gb|EFC83381.1| inner-membrane translocator [Frankia sp. EUN1f]
          Length = 757

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 58/319 (18%), Positives = 118/319 (36%), Gaps = 9/319 (2%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           RL +          V   +    L    +        +   I+ + A  + ++ G LG +
Sbjct: 323 RLPRVSVPRLRPLPVAGAVAVAGLVIALTSGTWRFSLVMSAIFTLIAVSVVLLTGYLGQI 382

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           SL  +       ++   L +  G+     + ++A++S   G+I+G+P+L+ RG  LA+AT
Sbjct: 383 SLATMAFAGAAGFALSKLTTNAGVPFPFSLFLAAVVSTLLGVIVGVPALRIRGAQLAVAT 442

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           +  +   +  +     +T     +     L+     VR          S         Y+
Sbjct: 443 VAAALAIEAFVFNNPSLTPYSGALIKDPSLFGYSLAVREGTNIITLRFS---------YL 493

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +  L    +  L   A   A+  +R N++A  S    +   KL  FA++S   G+ G
Sbjct: 494 VLAVVVLLLIAVARLFGGATGRAFLAVRSNERAASSAGVDVAATKLLGFAIASFLAGIGG 553

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                S  ++S   F     + V+++  +GG+T+++    A       V           
Sbjct: 554 GLIGYSSGQLSAASFTVLVGLTVLAMTYVGGITTITGAVIAGLAGPLGVLYLFLNQSLDL 613

Query: 307 NSLLKFDCSFNMRHTTLMV 325
           +       +  M    ++ 
Sbjct: 614 SKYYTLIAALGMLLRAVVF 632



 Score = 46.4 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 94/305 (30%), Gaps = 11/305 (3%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           ++         +Y +    L  +  + G+++         G +    L +   L + +  
Sbjct: 6   QFAVLGFSTGAVYAVLGSSLVSIYVATGIINFAQGSLALWGVWQTAALQANGTLVLPIGS 65

Query: 97  P----------VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
                       + +I  A  ++  + +       L  A ++   +    ++        
Sbjct: 66  FKLTDGPTDTVPALLIGAASCLVWAVLAHFLVFRPLRRAPVLGQVVASVGMMLLLQALVT 125

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                    L         ++    F  +     +    +      ++A +  +LR T +
Sbjct: 126 LRFDADTLGLDPTVLIPMPILPSDTFTLAGATIAVSNLILAGIAIAIAAGMWAYLRFTKM 185

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             A R   ++++A   L  +        +  +    G+     A +   + P        
Sbjct: 186 GTATRAGAEDERALRLLGYSPDRLAALVWGATGFVSGLIVVLAAPAIGGLDPTS-YMFYV 244

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           +  +S+ ++G +TS+  +  A   L  + ++        +          +     ++V+
Sbjct: 245 VPALSVALVGRLTSVGTVCAAGLALGALQQILLFGTTKDWWPSWAQAGVGDAIPFVIVVV 304

Query: 327 ALFLV 331
           ALF +
Sbjct: 305 ALFAL 309


>gi|91789685|ref|YP_550637.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91698910|gb|ABE45739.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas sp. JS666]
          Length = 294

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 104/305 (34%), Gaps = 27/305 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +Y +      ++  +  ++++       I AY +    +  GL +WL IP +
Sbjct: 13  LAGLGTGGLYALTGLAFVMIYKATRVVNIAIGEMLMISAYIFFAFSAGMGLPVWLAIPGA 72

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            ++SGA G ++    ++       I++ +++    +IL+    +        + + L   
Sbjct: 73  LLVSGAFGALVERTMIRPMLGESPISSFMVTVGLSSILVGLVELIWTADQQRLPEFLPSK 132

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +       +    F I  + +  VLL   F    +           A R    +Q A
Sbjct: 133 PIEIGEAFVSPKIFYGFWIAVLLIVVVLLVFRFWRGGV-----------ALRATASDQAA 181

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
            +S+   +      A+  ++   G+AG    +               + V+ +VI GG+ 
Sbjct: 182 AYSMGINVPRVFSLAWVAAAMIAGVAGIVVGS---IGGISSAMGVFGLSVLVVVIFGGLD 238

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        ++  V  L        +  L  F               L L++++R + L
Sbjct: 239 SVLGALVGGILVGLVEALTGFYLGGEYKILATFS-------------LLVLILMVRPYGL 285

Query: 340 LRLRT 344
                
Sbjct: 286 FGTHE 290


>gi|15669455|ref|NP_248265.1| high-affinity branched-chain amino acid transport protein BraD
           [Methanocaldococcus jannaschii DSM 2661]
 gi|18202575|sp|Q58665|LIVH_METJA RecName: Full=Probable branched-chain amino acid transport permease
           protein livH
 gi|1591904|gb|AAB99275.1| high-affinity branched-chain amino acid transport protein (braD)
           [Methanocaldococcus jannaschii DSM 2661]
          Length = 315

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 100/283 (35%), Gaps = 15/283 (5%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
              +  + +        +G+Y  + L   +G+  +L +PV  ++    G+I  L      
Sbjct: 35  TYITTNVPNFAQGSYAIVGSYVALTLLKLFGICPYLSLPVLFVVGAIVGLITYLALKPLI 94

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
               ++  L+++ +  ++++              ++ L  +  + ++   F     S   
Sbjct: 95  KRNASVEILMIATLAIDLILLGVI-------GAYSEILSQIVGSTQAKFVFANLDFSLFG 147

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
           ++  ++     +  L   + L L +T    A R   +N     ++   +   +L ++ +S
Sbjct: 148 FKGILFVSTFVVILLLIGLYLLLYKTKFGIALRASMENPSLAQTMGIDVEKTRLFSWILS 207

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
            A  G+AG      ++ +         +I   SIV  GG+  +S       I+     L 
Sbjct: 208 GALAGVAGGLLPFMQEIVPATGDLIIISIFAASIV--GGLRHISGALIGGYIIGISESLI 265

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                        F   F +    + +I +   +L+  + +  
Sbjct: 266 TYYLAS------AFGTGFLVYGKVISLIIMIATLLIAPYGITG 302


>gi|326316120|ref|YP_004233792.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323372956|gb|ADX45225.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 294

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 95/298 (31%), Gaps = 26/298 (8%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           +    Y + + GL+++ G L +++      + +GA    + GS +G++ W+++  + ++ 
Sbjct: 20  VNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGALLTWMAGSYFGINYWVMLVAAPLVV 79

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
           G  G+ +    L++      +  L+++     ++        G +G              
Sbjct: 80  GLFGVAIERLLLRWIYKLDHLYGLLLTLGLTLLIEGVFRSIYGVSG----------LGYD 129

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
              +        F+I   +  +V+     +       + +T +    R   +N +   + 
Sbjct: 130 TPELLEGATNLGFMILPNYRAWVVAASIVVCIGTWYVIEKTKLGAYLRAGTENPRLVEAF 189

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              +       +A  +A    AG   A                +  + +  +GGM S+  
Sbjct: 190 GINVPVMITLTYAFGAALAAFAGVLAAPVYQVTPLMGQNLIIVVFAVVV--IGGMGSIMG 247

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  L  V            ++++                     +L+R   L  
Sbjct: 248 SILTGLGLGVVEGFTKVFYPEASSTVVFVIMVVV--------------LLIRPAGLFG 291


>gi|237880788|gb|ACR33046.1| ABC sugar transport permease [Actinoplanes garbadinensis]
          Length = 352

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/316 (11%), Positives = 92/316 (29%), Gaps = 28/316 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +  + L+A+   +          S+  + ++        + A G+ +++   G + 
Sbjct: 39  LRRREASVLLVAIGLMIYFRASSPVFLSRDNLVNIAQATAPVAIIAVGIVLLL-VSGEID 97

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  I  A+  + +    + Y L +     V+  I+   G++ GL   +           
Sbjct: 98  LSVGIVAALAPFLFHFGINFYSLPVVPAFVVALAIAAGIGLVNGLIVTQLHVPSFVTTLG 157

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               +   +LI                  +     +    +              + + L
Sbjct: 158 TFFAVQGILLIT----------------SHAYPVPIPDAAKGTFQTWLGAGPWASITWAL 201

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +      + L    T       ++  N              K+  F ++S   G+ G 
Sbjct: 202 IIVAIFHTVLTL----TRWGLHTISVGGNPVGATEAGIRASRIKIGNFVITSTLGGLVGI 257

Query: 248 FFAASRDRISPD-MFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCG 300
             A   + I P+     +     IS  ++GG        ++        +L  +      
Sbjct: 258 MEAFRINTIDPNIGGGTTLTFYAISAAVIGGTALAGGSGTIVGAFLGALVLAELQNGFNL 317

Query: 301 MNFYYFNSLLKFDCSF 316
           + +      L    + 
Sbjct: 318 IGYSANTIFLILGLAI 333


>gi|152995619|ref|YP_001340454.1| monosaccharide-transporting ATPase [Marinomonas sp. MWYL1]
 gi|150836543|gb|ABR70519.1| Monosaccharide-transporting ATPase [Marinomonas sp. MWYL1]
          Length = 385

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 53/341 (15%), Positives = 92/341 (26%), Gaps = 30/341 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +  I   + V     +        +   I +         + A    +++   G   L+ 
Sbjct: 44  FGAISGAVLVFVFFFITAGDSGMFASDGIMNWTTVSAQLGLIAISACLLM-IAGEFDLSI 102

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLI 128
                       I    +G  IW  I  +   +   G + G   +K       +++A L 
Sbjct: 103 GSMIGFAGMMMTIPAVYWGWPIWGAILFAFAGALFIGFLNGYIVVKTGLPSFIVSLAFLF 162

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY---- 184
           M       L           GI       +L      +I    F     I  I  Y    
Sbjct: 163 MLRGLTIALSILFTNRTIVGGIDKYADGDWLAALFGGVIGKSLFVWFANIGLISSYDDGT 222

Query: 185 -------YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                   V++   FL+      L RT   N       + KA  ++   +   K+S F  
Sbjct: 223 PVVEGIPMVIVWCVFLAVVASWVLLRTKYGNWIFATGGDDKAARNVGVPVDKVKISLFMF 282

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILI 292
           ++    +  A         S D     E   +I++VI      GG  S+        I  
Sbjct: 283 TAFTATVYAACQVFEFGSASADRGVLKEFEAIIAVVIGGALLTGGYGSVIGACFGALIFG 342

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
            V              +       +     L  + L  V+ 
Sbjct: 343 VVQ-----------MGIFFTGIDSDWFRVFLGAMLLIAVLF 372


>gi|300117538|ref|ZP_07055325.1| branched-chain amino acid ABC transporter, permease [Bacillus
           cereus SJ1]
 gi|298725073|gb|EFI65728.1| branched-chain amino acid ABC transporter, permease [Bacillus
           cereus SJ1]
          Length = 286

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 102/305 (33%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  +  L   
Sbjct: 8   FVNGISTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYVLALTGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 68  IAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKVFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L     F    VI   +  +V+L    +  ++++ L++T I    R    +++
Sbjct: 116 PIGAKLPLWLQGSFTFGGVILIKYRLFVILIGIIIYVALLVLLKKTKIGLMIRAGVMDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++ + 
Sbjct: 235 GSVQGSAIASLIVGLAGAFTAYF--------------IPDLSLAINMLMLLFFLIVKPNG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|291296059|ref|YP_003507457.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
 gi|290471018|gb|ADD28437.1| inner-membrane translocator [Meiothermus ruber DSM 1279]
          Length = 285

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 98/283 (34%), Gaps = 13/283 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   IY + A GL++ VG +G+++        IGA+   +L    GL  +L + +
Sbjct: 8   LINGILAAGIYALVASGLALAVGVVGIVNFAHGEFTMIGAFIAYLLFVGTGLDPFLSLGL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A++    G I  L  ++       +  ++++      L     +  G            
Sbjct: 68  AALVLFGVGAITYLGLIRPVLAAPELNQMLLTFGLSVALQNIALLLFGAD---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V +  +        + + +           +  ++  +L RT +  A R +  N+ 
Sbjct: 118 -TRVVSTSYQGATLSLGGLSFGVPPLLAFGLSVVILGALYGFLDRTRLGLAVRAVAQNRL 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L        L AF +S+A  G+AG   +            F+  +   +I+++ G+
Sbjct: 177 APGLLGIETQRVYLLAFGLSAALAGVAGVMLSVMLYA--SPTVGFAYTLKAFAIIVMAGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            +L  +  A  IL     L           +            
Sbjct: 235 GNLRGVVPAAIILALAEALVSTYLPGGGGWVEAVFFLVIFVAL 277


>gi|188593487|emb|CAQ53856.1| ABC type branched chain amino acid transport system [uncultured
           bacterium]
          Length = 154

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 15/160 (9%)

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           MY  +L +      ++  +  +      + IR++Q    S        KL AF +S A  
Sbjct: 1   MYLFVLVIFLAGFLLLWRVVHSPFGQILKAIREHQDRATSPGYDTDTFKLLAFVISGALA 60

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G AGA  A      S     +S +  V+ + ++GGM +L       A+++ +      + 
Sbjct: 61  GTAGATKALVFQLASLTDVHWSMSGEVVLMTLVGGMGTLFGPVAGAAVIVSMQNYLAQL- 119

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                             T +  +   + +L     ++  
Sbjct: 120 --------------GAWVTVVQGVIFVVCVLAFRRGIIGE 145


>gi|30466151|gb|AAP33286.1| LivM [uncultured Acidobacterium sp.]
          Length = 277

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 55/260 (21%), Positives = 107/260 (41%), Gaps = 39/260 (15%)

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + L I V+A+ +G  G+++G+PSL+ RGDYLAI TL   EI + ++++     +G  G  
Sbjct: 52  LVLGISVAAIAAGLAGVVVGIPSLRLRGDYLAIVTLGFGEITRVLILR-HRCRSGARGFS 110

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
               L         L       +                       I  L  ++   A+ 
Sbjct: 111 DIPPLSNFFFFWVFLFVLVTVST-----------------------IHNLVNSSYGRAFI 147

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
           +IR+++ A  ++       K+ +F +SS F G+ G+ F      ++P+ F F  +  +I 
Sbjct: 148 SIREDEIAAEAMGVDTTRFKVLSFVISSMFAGIGGSLFGHYTAYLNPNTFTFVTSFYLII 207

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           ++++GG+ S+        ++  ++E    ++ +                     I L LV
Sbjct: 208 MIVVGGLGSIGGSILGAVLVTVILEAFRSLSEF---------------RLVGFSILLVLV 252

Query: 332 ILMRSHSLLRLRTPSNFLER 351
           ++ R   L+  R    F  +
Sbjct: 253 MIYRPQGLMGSRGMFKFRRK 272


>gi|172056474|ref|YP_001812934.1| monosaccharide-transporting ATPase [Exiguobacterium sibiricum
           255-15]
 gi|171988995|gb|ACB59917.1| Monosaccharide-transporting ATPase [Exiguobacterium sibiricum
           255-15]
          Length = 339

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 111/318 (34%), Gaps = 22/318 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           LN +  +L +LA++    +            + ++   I I  + A GL++ +   G   
Sbjct: 27  LNDWGIVLAILALILFFAMTA--PNFLQGTNLVNILRSISIVTIIAIGLTVSLTVNG-FD 83

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+        +   V     Y L + + I ++ +I+ A  ++  L  +KF+   L  ATL
Sbjct: 84  LSVGSTATFASSLVVSFFVWYSLPLGVSIGLALVIALAVALVNILLIVKFKIPDLF-ATL 142

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               IF+ + + +    +  AG+   D    +G    S ++  + P           +++
Sbjct: 143 ATMFIFEGVAMTYTGGGSISAGMPRLDGTPTVGLIPESFLKISQAP-----------WII 191

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L M  + A   ++L  T        I  N +A       +   +  A+ ++     + G 
Sbjct: 192 LIMLVVVAVTHVFLNHTRHGRFLYIIGGNPEAAHLTGIRVNRYRAVAYLIAGLLAAVGGI 251

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILG------GMTSLSKIAKATAILIGVVELCCGM 301
             A+     S         +  ++   +G      G  +         ++  +      +
Sbjct: 252 LLASQVGS-SQINAGSGYLMPAVAAAFIGSSFAGQGKPNALGTLVGACLVGILENGLVML 310

Query: 302 NFYYFNSLLKFDCSFNMR 319
           +  Y++  +       + 
Sbjct: 311 SVPYYSLNIIKGAVLAIA 328


>gi|170695610|ref|ZP_02886753.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
 gi|170139409|gb|EDT07594.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
          Length = 355

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/300 (10%), Positives = 78/300 (26%), Gaps = 10/300 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +      +          S + +  M   + +    A G++ V+   G + L+      
Sbjct: 28  FIALFAVVIFFSFAAHNFLSIENLLIMSRHVALNAFLAIGMTFVI-VAGGIDLSVGSIVG 86

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +      ++     L+   L     +      +I            +    +    +   
Sbjct: 87  LSG----MIAGGLILNGIPLGSSYTLYLSVPEVIGVALLSGVAVGAVNGLLITRLNVAPF 142

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I           A +  +    F   T         FP       + +   +  +  + A
Sbjct: 143 IATLGTLYIARGAALLSSGGETFPNLTGNPDFGTTGFPILGSSSILGIPLTIWLLVVVGA 202

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  RT +      I  N++A       +   K+  +  S     + G   ++    
Sbjct: 203 FAAYLAARTPLGRQIYAIGSNERAAQLSGVRVNRVKMFVYMFSGFCAAIVGLIISSELVA 262

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P   +  E   + + V     + GG   +        ++  + +    M    F   +
Sbjct: 263 SHPLSGETFELNAIAAAVLGGTSMSGGRGKIGGTIIGAFVIGILSDGLVMMGVSSFWQTV 322


>gi|62390140|ref|YP_225542.1| ribose/xylose/arabinose/galactoside ABC-type transporter permease
           [Corynebacterium glutamicum ATCC 13032]
 gi|21324020|dbj|BAB98646.1| ABC-type transporter, permease components [Corynebacterium
           glutamicum ATCC 13032]
 gi|41325476|emb|CAF19956.1| Ribose/xylose/arabinose/galactoside ABC-type transport system,
           permease component [Corynebacterium glutamicum ATCC
           13032]
          Length = 324

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 94/311 (30%), Gaps = 30/311 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  +   + LF+      +   + ++GIQ     + A+G++ V+ + G + L+     
Sbjct: 26  ALVGLIALCVGLFIATPHFLTIPNLINIGIQSATVAILAFGMTFVIVTAG-IDLSVGSVA 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GA +     +  GL  W+ + +   I    G I G+     +                
Sbjct: 85  ALGAMTSAYFFAEVGLPGWITLLIGLFIGLLAGAISGISIAYGKLPAFI----------- 133

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  S I      ++       +   +L M    
Sbjct: 134 -----------ATLAMMSIARGITLVISQGSPIPSAPAVNALGRTYFGIPMPILMMALAG 182

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N +A       +    +  +A++  +  +AG        
Sbjct: 183 IVCWFILSRTVLGRSMYAIGGNMEAARLSGLPVKKILVMVYALAGVYAALAGLVMTGRLS 242

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              P        +  I+ V++GG          +       +L  +      +N   F  
Sbjct: 243 SAQPQA-GVGYELDAIAAVVIGGASLAGGTGKATGTLIGAILLAVIRNGLNILNVSSFWQ 301

Query: 309 LLKFDCSFNMR 319
            +   C   + 
Sbjct: 302 QIVIGCVIALA 312


>gi|325525765|gb|EGD03501.1| putative ribose transport system, permease [Burkholderia sp. TJI49]
          Length = 339

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 91/313 (29%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L         L  +      +     ++  QI   V+ + G++ V+   G + L+     
Sbjct: 38  LAGALAAMIALFSVLSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAG-IDLSVGSVL 96

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +   ++         +   ++ A G + G  ++ +R       +L + E  +
Sbjct: 97  ALAASMVSVAALKWQWGPLPAALIGIAVATATGALTGAVTVGWRIPSFI-VSLGVLEAAR 155

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  +         G                      F        + +    L    + 
Sbjct: 156 GLAYQLTNSRTAYIGDA--------------------FDFLSNPIALGISPAFLIAVAVM 195

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    L RT        I  N++A           K+  FA+  A  G+A  F  +  +
Sbjct: 196 IAAQFVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKILVFALMGALAGLASLFQISRLE 255

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +      +        
Sbjct: 256 AADPNAGVGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGANEPTKR 315

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 316 IITGAVIVVAVVL 328


>gi|159185646|ref|NP_357403.2| ABC transporter, membrane spanning protein (ribose) [Agrobacterium
           tumefaciens str. C58]
 gi|159140780|gb|AAK90188.2| ABC transporter, membrane spanning protein (ribose) [Agrobacterium
           tumefaciens str. C58]
          Length = 333

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 86/301 (28%), Gaps = 17/301 (5%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +          + ++  +     + A G + V+ + G L L+     A  A   ++  + 
Sbjct: 38  IANPNFIGIDNLLNVVTRSAFIAIIALGATYVI-TSGGLDLSVGAMVAFVASLMILFMNS 96

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             ++  LL+ ++AM            +         I   I +     I           
Sbjct: 97  GVIASPLLMLLTAMALAIAIGAACGLTNGLITTIGRIEPFIATLGTMGIYRGLTTW---- 152

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                         T+R+      +   +    + +   ++ +   +A     L RT   
Sbjct: 153 -------LSQGGAITLRNPDIQTLYRPVYFGNVLGVPVPVIVIFVTAAIAAFVLYRTRYG 205

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  ++        +++  +  A+ V    + +A   +       S       E  
Sbjct: 206 RHLTAVGSSEDVARYSGISVVRVRTIAYVVQGLCVAVAVLLYVPRLASTSATTGMLWELQ 265

Query: 268 IVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V+      GG+  +        IL  V  +    NF     +     +  +    
Sbjct: 266 AITAVVVGGTALRGGVGRIWGTICGAFILEIVGNIMILSNFVSEYLIGAIQGAIIIIAML 325

Query: 323 L 323
           +
Sbjct: 326 V 326


>gi|134292098|ref|YP_001115834.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|134135255|gb|ABO56369.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia vietnamiensis G4]
          Length = 345

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/319 (11%), Positives = 92/319 (28%), Gaps = 18/319 (5%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +   +     V+  +              + ++     +  + A   + V+ + G + L
Sbjct: 32  ARQKLLAFASLVLLIVFFGFASPNFLEVDNLVAILQATAVNGVLAVACTYVIITSG-IDL 90

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +        A    ++ + +G+ + L I  +       G + G    K +          
Sbjct: 91  SVGTLMTFCAVMAGVVLTNWGMPLPLGIVAALGCGALSGCVSGFVIAKMKVPPFIAT--- 147

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                    +    +  G + +    R  +   T              VI  + +   +L
Sbjct: 148 ---------LGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQDSLIGSVIPALPIPNAVL 198

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  ++    + L RT        +  N++A       +   K++ +    A  G+AG  
Sbjct: 199 ILFVVAIGASIVLNRTLFGRYTFALGSNEEALRLSGVNVDAWKIAVYTFGGAVCGIAGLL 258

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI-----AKATAILIGVVELCCGMNF 303
            A+  +   P + +  E   + ++VI G   S              I+  +      M+ 
Sbjct: 259 IASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGSGSIVGTIIGAFIMSVLTNGLRIMSV 318

Query: 304 YYFNSLLKFDCSFNMRHTT 322
                 +       +    
Sbjct: 319 AQEWQTVVTGVIIILAVYV 337


>gi|282864177|ref|ZP_06273234.1| inner-membrane translocator [Streptomyces sp. ACTE]
 gi|282561255|gb|EFB66800.1| inner-membrane translocator [Streptomyces sp. ACTE]
          Length = 338

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/279 (12%), Positives = 80/279 (28%), Gaps = 30/279 (10%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            LF     +     +  +Q+   V+ A G+++V+G+ G + L+     A+ A    +   
Sbjct: 54  ALFTDHFMTADNFRTQLVQVAPIVIVALGMALVIGTEG-VDLSVGSTMALAAAFLPLYLG 112

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              +   ++  ++  + GA                     L+     Q I+        G
Sbjct: 113 YGLVPALVVALLAGAVVGAVNGA-----------------LVSLVGLQPIVATLALFVGG 155

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                       +       I      S      + +  V+     L+ ++   ++RT  
Sbjct: 156 ------RGLALVMADGQLKQIVNPDLLSLGTGSFLGVPLVVWIAGLLAVAVAFLVQRTTF 209

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                 +  N+ A       +    +  + +      +AG    A      P        
Sbjct: 210 GRQIVAVGGNRSAAALAGLPVKRVLIGVYVLCGVLAALAGILATARLTASDPSSLGTLME 269

Query: 267 IIVISIVILGGM------TSLSKIAKATAILIGVVELCC 299
           +  I+ V++GG         +        ++  +     
Sbjct: 270 LSAITAVVVGGTPLNGGSVRVLGTVAGALLMQLLRATLV 308


>gi|91786508|ref|YP_547460.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91695733|gb|ABE42562.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas sp. JS666]
          Length = 309

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 90/306 (29%), Gaps = 18/306 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS-----IWLLIP 97
            +  ++Y + A G  ++  + G+ +          A +                + L   
Sbjct: 12  LMAGMLYSLVALGFVLIFKASGVFNFAQGAMVLFAALAMARFSEWIPQWTGIDNLILANA 71

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            + +I+G     +     +    +L         +    +  +              ++ 
Sbjct: 72  AAFVIAGLIMFAVAWLIERLVLRHLVNQEGATLLMATLGIAYFMEGLGQTLFGSNIYKID 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                   +          ++         +    L A + L+ ++TA   A R + D+ 
Sbjct: 132 IGMPKEP-IFVADGMFPGGILINKEDLIAAVIAAALVALLSLFFQKTATGRALRAVADDH 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +A  S+   +    +  + V+     +AG  + +            +  +  + +VILGG
Sbjct: 191 QAAQSIGIPLNRIWVIVWCVAGVVALVAGMIWGSKL---GVQFSLTTVALRALPVVILGG 247

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           +TS+        I+    +L       +    ++   +          +     +L R  
Sbjct: 248 LTSVPGAIIGGLIIGVGEKLSEVYLGPFVGGGIEIWFA---------YVLALGFLLFRPQ 298

Query: 338 SLLRLR 343
            L   +
Sbjct: 299 GLFGEK 304


>gi|328478453|gb|EGF48183.1| ribose ABC transporter permease [Lactobacillus rhamnosus MTCC 5462]
          Length = 305

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 86/316 (27%), Gaps = 34/316 (10%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      S   + ++  Q+ I  + A+G++ V+   G + L+     A+       + + 
Sbjct: 16  VMSPTFVSPANLLNLLRQVSINAVIAFGMTFVI-LTGGIDLSVGSILALSGAVTASMLTS 74

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
              +   L     + +    +   L +      Y   A  I +     I      +    
Sbjct: 75  GFAAPLALTVGLILGAVFGLLNGVLIA------YGKAAPFIATLATMTIFRGATYVFTNG 128

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
             I  A                F  P             ++ M  +   + + L +TA  
Sbjct: 129 NPITGAKMNNSFLFQFMGRGYLFGIPFP-----------IIIMIVVYGVLFVLLHKTAFG 177

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N+ A            +  + +S     +AG    +      PD     E  
Sbjct: 178 RKTYALGGNETAARIAGVRTKVVTMLIYTISGLMAAIAGIILTSRLSSAQPDAGTSYEMD 237

Query: 268 IVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V     + GG   +        I+  +      +    F                
Sbjct: 238 AIAAVVLGGTSLAGGKGRIFGTLIGALIIGTLNNGMNLLGISSFYQ-----------QIV 286

Query: 323 LMVIALFLVILMRSHS 338
             ++ L  V+L R   
Sbjct: 287 KGIVILIAVLLDRRSG 302


>gi|328542661|ref|YP_004302770.1| amino acid ABC transporter permease [polymorphum gilvum
           SL003B-26A1]
 gi|326412407|gb|ADZ69470.1| Amino acid ABC transporter permease protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 292

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 100/305 (32%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +Y + A GL+++ G + +++L   I    GAY    L   YGL   L +P+
Sbjct: 8   LILGLALGGVYALMASGLTLIFGVMRIVNLAHPIMIIAGAYVSYWLFRLYGLDPILSMPI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+     G+I+     +        + + +   F   L     +               
Sbjct: 68  AAVFMFCVGLILYKLVFEREAASAKYSEMTVLLTFAVALCFDGAL---------GAMFSN 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +       Y  +    +  +++++L  T    A R    N+ 
Sbjct: 119 TQRVTSPSYATDAIFIGDLFIPTGQLYAGIASIAVIGALMVFLHFTRFGYAIRATTQNRA 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    L  F +     G AGA  +          +++   ++ +  V+LGGM
Sbjct: 179 AAQLMGVNVGLVSLITFGIGIGLAGAAGALVSFIFSFFPAKHWEWIAILMSL--VVLGGM 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L        +L  +           +++L                +ALF+++L+R   
Sbjct: 237 GKLVGAIVGAILLSVIAAFVGTYAGATWSTLT-------------FFLALFVILLVRPQG 283

Query: 339 LLRLR 343
           L   +
Sbjct: 284 LFGDK 288


>gi|251791203|ref|YP_003005924.1| inner-membrane translocator [Dickeya zeae Ech1591]
 gi|247539824|gb|ACT08445.1| inner-membrane translocator [Dickeya zeae Ech1591]
          Length = 355

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/316 (12%), Positives = 92/316 (29%), Gaps = 18/316 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++      L +    +   +  M   + I  + A G+++V+   G + L+      
Sbjct: 17  FIALLIVVAFFSLMVPNFLTLSNLLIMTQHVAITGLLAIGMTLVI-LTGGIDLSVGAVAG 75

Query: 76  IGAYSYVILGSR----YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           I       L +     +G ++  L     +++ +   ++           L +A  I + 
Sbjct: 76  ICGMVAGALLTNGIPLWGGNLLFLNVPEVILTVSVLGMLIGLVNGVVITRLVVAPFICTL 135

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
               +      + N        D   +        +    F        + +Y  +  M 
Sbjct: 136 GMMYVARGLALLFN--------DGSTYANLNGMPALGNTGFALLGSGTLLGIYLPIWLML 187

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                 +   R+T +      I  N+ A       I+  K+  +A S     + G   A+
Sbjct: 188 AFLLLGLYLTRKTPLGRYIYAIGGNESAARLAGVPIVNVKIFVYAFSGLCAALVGLVVAS 247

Query: 252 SRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                 P      E   + + V     + GG   +S       +++ + +    M    F
Sbjct: 248 QLQTAHPMTGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFLADGMVMMGVSDF 307

Query: 307 NSLLKFDCSFNMRHTT 322
             ++            
Sbjct: 308 WQMVIKGLVIVTAVVI 323


>gi|218679950|ref|ZP_03527847.1| inner-membrane translocator [Rhizobium etli CIAT 894]
          Length = 256

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/257 (12%), Positives = 70/257 (27%), Gaps = 9/257 (3%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +    + + A GL+I  G   ++++        G++   +  S  GL+ ++   +   +
Sbjct: 9   LVLGGTFALMALGLTIQYGVARIMNVAYGEFVIGGSFLTYLAVSAAGLNPFVAFLLVVPL 68

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 +     ++           +  +           +              F    
Sbjct: 69  CYLASHLCYDLIMRPLERRSRKTGRLEVDSILATFGLMFLLQG-------VYLSSFGSGF 121

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                                    L    +  S+ L +++T    A R +         
Sbjct: 122 RGYDWLEVPVDIFGTKISSGRLVGALLAVAVGGSLYLAMQKTRWGMATRAVATRPGFAPL 181

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +         SAFAV  A     G   +  +             +  + +VI+GG+ +L+
Sbjct: 182 VGIDNERQARSAFAVGGALAAAGGVVLSMYQPF--TPTDGVFLTMKALVVVIMGGVGNLA 239

Query: 283 KIAKATAILIGVVELCC 299
               A  IL  V     
Sbjct: 240 GATAAGLILGLVEAGVS 256


>gi|330836062|ref|YP_004410703.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Spirochaeta coccoides DSM 17374]
 gi|329747965|gb|AEC01321.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Spirochaeta coccoides DSM 17374]
          Length = 329

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 93/313 (29%), Gaps = 25/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    +V  +++ +      S   + ++  Q  +  + + G   +    G + L+     
Sbjct: 25  IVFSLIVLSIVIAILSPRFLSLDNLRNVLAQATVSAVISVG-EFLAILTGGIDLSIGSIL 83

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+   +  +   R G+  +L + +  +I    G+I GL   K +  +  I+T     I +
Sbjct: 84  AMSIMAMGVFVVRLGMDPFLGMLLCLLIGTLFGLINGLLLTKLKLPHPFISTTGTKMIGR 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I +                                        Y   +   ++ +  L 
Sbjct: 144 GIALAITAAM-------------------PISGFPMAVQFMGSHYFGPIPASIVLVIVLY 184

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +  +L  TA       I  N +A       +   K   +A+S     +AG       +
Sbjct: 185 IGMFFFLTHTATGRHIYAIGGNTEASRLSGINVSKVKCIVYALSGFTAALAGIVLVGRVN 244

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P   +  E+  + +++I      GG   +        I+  +      +N       
Sbjct: 245 AAYPLAGQDYESDAIAAVIIGGASFSGGTGKIGNTIIGVLIIAVLRNGLNLLNVDSAFQT 304

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 305 VTIGVVIILAVYI 317


>gi|242240923|ref|YP_002989104.1| inner-membrane translocator [Dickeya dadantii Ech703]
 gi|242132980|gb|ACS87282.1| inner-membrane translocator [Dickeya dadantii Ech703]
          Length = 355

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/320 (10%), Positives = 87/320 (27%), Gaps = 10/320 (3%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           ++       +  ++      L +    +   +  M   + I  + A G+++V+ + G + 
Sbjct: 9   MSLLKARTFIALLIVVAFFSLMVPNFLTTSNLLIMTQHVAITGLLAIGMTLVILTSG-ID 67

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+      I       L +         +    +      + +    +      +     
Sbjct: 68  LSVGAVAGICGMVAGALLTNGIPLWGGNVLFLNVPEVILVVALFGVLIGLVNGVVITRLG 127

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           +   I    ++         A +   D   +        +    F        + +Y  +
Sbjct: 128 VAPFICTLGMMYVAR----GAALLFNDGSTYANLNGMPELGNTGFAILGSGTLLGIYLPI 183

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             M       +   R+T +         N+ A       I+  K+  +A S     + G 
Sbjct: 184 WLMALFLLIGLYLTRKTPLGRYIYATGGNESAARLAGVPIVNVKIFVYAFSGLCAALVGL 243

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
             A+      P      E   + + V     + GG   +S       +++ + +    M 
Sbjct: 244 VVASQLQTAHPMTGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFLADGMVMMG 303

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F  ++            
Sbjct: 304 VSDFWQMVIKGVVIVTAVVI 323


>gi|187918881|ref|YP_001887912.1| monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
 gi|187717319|gb|ACD18542.1| Monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
          Length = 333

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 96/306 (31%), Gaps = 27/306 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             +L  L      +     ++  QI   V+ + G++ V+   G + L+     A+GA   
Sbjct: 40  MIVLFSLLSSHFLTYDTFSTIANQIPDLVVMSIGMTFVLIIAG-IDLSVGSVLALGAALT 98

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +   ++         +    +   G + G  ++ +R       +L + E  + +  +  
Sbjct: 99  SVAALQWHWPALPAALLGMAGATLTGCVTGAITVAWRIPSFI-VSLGVLEAARGLAYQLT 157

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
                  G                   F   P +F I   F+  +++ +           
Sbjct: 158 NSRTAYIG---------------DAFDFLSNPVAFGISPAFIIAIVVMVAAQFVL----- 197

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            RT        I  N++A           K++ FA+     G+A  F  +  +   P+  
Sbjct: 198 TRTVFGRYLVGIGTNEEAVRLAGVNPRPYKIAVFAMMGLLAGLASLFQISRLEAADPNAG 257

Query: 262 KFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +  E  ++ ++VI     +GG  S++       I+  +      +        +      
Sbjct: 258 QGIELQVIAAVVIGGTSLMGGRGSVTSTFFGVLIISVLAAGLAQIGATEPTKRIITGAVI 317

Query: 317 NMRHTT 322
            +    
Sbjct: 318 VVAVVL 323


>gi|222086385|ref|YP_002544919.1| urea or short-chain amide ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221723833|gb|ACM26989.1| urea or short-chain amide ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 284

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 106/304 (34%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       ++  + + GL++ +G +  ++L        G Y  VIL +R+G+   L +P+
Sbjct: 5   LFDGLAYGMLLFVLSCGLAVTLGLMNFINLAHGAFAMAGGYVTVILTNRWGVPFLLTLPI 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+I+         D   +  ++ S     + +       G     +    + 
Sbjct: 65  AFIATAIAGVILEKTLYARLYDKTPLDQVLFSIGIVFMAVAGIDYVMGSQQQILNLPDFL 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G          R     V   ++  +++L    L+ ++ + L RT   +  R   D+++
Sbjct: 125 RG----------RVDVLGVGIGVYRAFLILVCGALAVALQMILARTRFGSRLRASVDDRR 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       FAV S   G+ GA  A          F     +  + +V +GG 
Sbjct: 175 VARGVGIHVNTIFAVTFAVGSGLAGLGGALGAEILGL--DPTFPLKFMVYFLIVVSVGGT 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S+     A+ +L     L                         ++ I L  V+++R   
Sbjct: 233 SSMYGPLCASILLGVADVLGKYYVPSLGG--------------FIIYIILVAVLVVRPQG 278

Query: 339 LLRL 342
           L   
Sbjct: 279 LFAR 282


>gi|209543048|ref|YP_002275277.1| Monosaccharide-transporting ATPase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209530725|gb|ACI50662.1| Monosaccharide-transporting ATPase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 327

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 51/309 (16%), Positives = 101/309 (32%), Gaps = 11/309 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            VV  ++  L   A  S     ++ +Q         G + V+   G + L+     A+  
Sbjct: 18  LVVMIVIFALTSRAFFSVDNGLTVALQTTQIAYLGIGATCVI-ITGGIDLSVGSVLALSG 76

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               +          L   +  +  GACG I G+     +      ATL M  + + + +
Sbjct: 77  VVAALAVKAGVPVP-LGFAIGILTGGACGAINGIIITWMKLPPFI-ATLGMMMVARGVAL 134

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
           +   IT  +    + D    LG      I          +  + + Y ++ M  L+  + 
Sbjct: 135 Q---ITGARPVSGLGDAFGVLGNGALFRIVRDGSDGFPNVVFVGIPYPVILMVVLAVVVA 191

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + L R  I      +  + +A       +   K+ A+ +S    G+AG    +      P
Sbjct: 192 IMLGRMPIGRHAYAVGSSSEAARLSGVNVARVKMVAYGMSGLLAGLAGCVLMSRLVTAQP 251

Query: 259 DMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           +    +E   + S VI     +GG+ ++S       ++  +          YF   +   
Sbjct: 252 NEGIAAEMDAIASAVIGGTSLMGGVGTISGTMIGAFVIGILRNGLNMNGVSYFIQQIVIG 311

Query: 314 CSFNMRHTT 322
                    
Sbjct: 312 LVIIGTVWI 320


>gi|152995898|ref|YP_001340733.1| monosaccharide-transporting ATPase [Marinomonas sp. MWYL1]
 gi|150836822|gb|ABR70798.1| Monosaccharide-transporting ATPase [Marinomonas sp. MWYL1]
          Length = 354

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 91/312 (29%), Gaps = 9/312 (2%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +        +    +   +  M   I I    A G++ V+ + G + L+      
Sbjct: 30  FIALFLILAFFTFMVPGFLAASSVVIMVKHIAINAFLALGITFVIITAG-IDLSIGAILG 88

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                   L ++    I L +   A+      ++  +  +      +    +    +   
Sbjct: 89  FCGMVAGWLITKG---IVLPMFGIAIFPSVWLIVPMVLVIGGLIGAVNGILITRYNVAPF 145

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I           A + ++    F G +    +    F        + + Y +  M  L+ 
Sbjct: 146 ICTLGTMYIVRGAAMLLSGGETFTGLSGNEQLGNTGFELIGSAKLLGLPYAIWMMFILAG 205

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I    +RT        I DN+ +       +   K+  + +S     +AG   ++    
Sbjct: 206 VIAYIAKRTQFGRHVFAIGDNEHSAELSGVKVRSVKVWVYTISGLCAALAGIVVSSQLVA 265

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+      GG  ++        ++  + +    M    F  ++
Sbjct: 266 SHPATGVAFEMNAIAAVVLGGTSLAGGRGTIMGTLIGAFVIGILADGLVMMGVSEFWQMV 325

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 326 IKGVVIILAVII 337


>gi|16265227|ref|NP_438019.1| putative branched-chain amino acid uptake ABC transporter permease
           protein [Sinorhizobium meliloti 1021]
 gi|15141367|emb|CAC49879.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
          Length = 287

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 85/303 (28%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                   +  + + GLS+ +G + +++L       IG Y         GL     + ++
Sbjct: 9   VDALAYGTVLFVISIGLSVTLGLMRVVNLAHGAFAMIGGYIASYAARDLGLGYGAAVLIA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
              +    + +     +       +  ++M+      +I       G     +       
Sbjct: 69  VFGTIVIAIPIERLLYRRIYGQPELTQVLMTIGITFCIIGIANYVFGPTLKTIPLPPSLE 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G               F    +   + ++    ++ ++   + +TA     R   DN   
Sbjct: 129 G----------SADLGFRSIAVHRIFAIVCGLAVAGALWFAIEKTAFGVKLRAAVDNAAM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FAV+       G   A          +     +  + +V +GG  
Sbjct: 179 AAALGVRTEVVYAVSFAVAVGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L G+      +   +                    +A+  ++ +    L
Sbjct: 237 SIPGALAACLLLGGIDTTGRYLMPEFGE--------------FFFYLAVIAIVCVFPRGL 282

Query: 340 LRL 342
              
Sbjct: 283 AGR 285


>gi|260576998|ref|ZP_05844978.1| Monosaccharide-transporting ATPase [Rhodobacter sp. SW2]
 gi|259020754|gb|EEW24070.1| Monosaccharide-transporting ATPase [Rhodobacter sp. SW2]
          Length = 354

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/329 (11%), Positives = 92/329 (27%), Gaps = 8/329 (2%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L  ++ +L +  VV   +L +   A  + + +          ++ A GL++VV   G + 
Sbjct: 7   LRSWEAMLAVALVVEIAVLGMISPAFLNIENLLFSTSDFAHVIIAAVGLTLVV-ITGGID 65

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++ V    + +    +           +    A+ +G          +        + TL
Sbjct: 66  ISGVSVMGLASIVMGLAFVAGAPIGLAVAV--ALATGLGAGAFNGVVVARTDVNPLVITL 123

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               +F  I      + +           +              F         ++   L
Sbjct: 124 ATLFLFSGIATGLPTLLDLLGFKAYGAGGFEAYQYEGITGLPKSFTWLGTGSIGWVPLPL 183

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +    ++ +    L RT        I  +          +    +  +A +     +AG 
Sbjct: 184 IVTVMVALAGGALLSRTRFGRFLYFIGVSADVARFTGVPVRRTLILVYAFNGLCAAIAGL 243

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
              A       D+   +   I+ ++V     I GG  S+     A  +L  + +    + 
Sbjct: 244 VLTAYFTSARSDLGSEALLNIITAVVLGGTSIQGGSGSVLGTFLAGLVLGYLRQGLLALG 303

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
                  +             +  A   +
Sbjct: 304 ITSDVVPVIIGALLVGSVALKIGSAALAM 332


>gi|332717180|ref|YP_004444646.1| branched chain amino acid ABC transporter, membrane spanning
           protein [Agrobacterium sp. H13-3]
 gi|325063865|gb|ADY67555.1| branched chain amino acid ABC transporter, membrane spanning
           protein [Agrobacterium sp. H13-3]
          Length = 287

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 89/304 (29%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       ++  + + GLS+ +G + +++L       IG Y         GL     I V
Sbjct: 8   LVDALAYGMVLFIISIGLSVTMGLMRVVNLAHGAFAMIGGYLASYAAHGLGLGYAAAILV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +    + +     +       +  ++M+      +I       G     +      
Sbjct: 68  AIVGTIVIAIPLERFLYRRIYGAPELTQVLMTIGITFCIIGIANFVFGPTLKTIPLPQEL 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G T             F        + ++    ++A++     +TA     R   DN  
Sbjct: 128 AGPT----------DLGFRTIATHRIFAIVAGLVVAAALWFTFEKTAFGIKLRAAVDNAA 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L          +FA++     M G   A          +     +  + +V +GG 
Sbjct: 178 MAAALGVRTEIIYAVSFAIAVGLAAMGGVIGAELLPV--EPYYALRYMVTFLVVVSVGGA 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  +L  +      +                        +A+ ++I +    
Sbjct: 236 GSIPGALIACLLLGAIDTTGRYLA--------------PEYGEFFFYLAVIVIITLFPRG 281

Query: 339 LLRL 342
           LL  
Sbjct: 282 LLGR 285


>gi|307321317|ref|ZP_07600717.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|306893045|gb|EFN23831.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
          Length = 287

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 86/303 (28%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + +++L       IG Y         GL     + ++
Sbjct: 9   VDALAYGMVLFVISIGLSVTLGLMRVVNLAHGAFAMIGGYIASYAARDLGLGYGAAVLIA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
              +    + +     +       +  ++M+      +I       G     +       
Sbjct: 69  VFGTIVIAIPIERLLYRRIYGQPELTQVLMTIGITFCIIGIANYVFGPTLKTIPLPPSLE 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G               F    +   + ++    ++ ++   + +TA     R   DN   
Sbjct: 129 G----------SADLGFRSIAVHRIFAIVCGLAVAGALWFAIEKTAFGVKLRAAVDNAAM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FAV+       G   A          +     +  + +V +GG  
Sbjct: 179 AAALGVRTEVVYAVSFAVAVGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGAG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L G+      +   +                    +A+  ++ +    L
Sbjct: 237 SIPGALAACLLLGGIDTTGRYLMPEFGE--------------FFFYLAVIAIVCVFPRGL 282

Query: 340 LRL 342
              
Sbjct: 283 AGR 285


>gi|238794131|ref|ZP_04637747.1| Autoinducer 2 import system permease protein lsrC [Yersinia
           intermedia ATCC 29909]
 gi|238726529|gb|EEQ18067.1| Autoinducer 2 import system permease protein lsrC [Yersinia
           intermedia ATCC 29909]
          Length = 345

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 93/305 (30%), Gaps = 27/305 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +  +    LL +      + +    +     I ++ A G ++V+     + ++      +
Sbjct: 1   MAILALFALLGVIDSNYFTLQTFTMIFSSAQILILLAIGATMVM-LTRNIDVSVGSITGL 59

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
            A +  +     G  +      + ++    G   G+     R                  
Sbjct: 60  CAVTVGM-ALNAGFGLATSCLFALLVGMVTGFFNGILVTWLRIPA--------------- 103

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           ++          G+ +          + + ++    P  F I  I    +LL       +
Sbjct: 104 IVATLGTLGLYRGLMLLITGGKWIEGLPADLKSLSTPILFSISPIGWLIMLLI-----VA 158

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           + L L +TA   ++    DN +    L       ++ AF+++     +AG  FA+    I
Sbjct: 159 MALLLGKTAFGRSFYATGDNLQGARQLGIRTDSIRIFAFSMNGVMAALAGIVFASQIGFI 218

Query: 257 SPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                   E   + + V     +LGG  ++        +L  +  +   +    + +   
Sbjct: 219 PNQTGSGLEMKAIAACVLGGISLLGGTGTILGAILGAYLLTQIDSVLVLLRLPAWWNDFI 278

Query: 312 FDCSF 316
                
Sbjct: 279 AGLVL 283


>gi|92118312|ref|YP_578041.1| inner-membrane translocator [Nitrobacter hamburgensis X14]
 gi|91801206|gb|ABE63581.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Nitrobacter hamburgensis X14]
          Length = 291

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 104/308 (33%), Gaps = 27/308 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +  + + GL+I+ G+LG+L+L     + +G Y+  +    Y  S  + +  
Sbjct: 11  LFNGLVLGALLALISSGLTIIYGTLGVLNLAHGAMFMLGGYAGYV-AYTYTDSFIVAVIA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            ++     G+ M    ++          L+++       ++   +  G   + V     F
Sbjct: 70  GSLFVMVVGVAMERIIIRRFYGRPDEDQLLVTFGLGICFVEVVRLFFGSLSLTVPTPTIF 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G T             F+ Y  +   +++ +      + L L RT +    R   ++  
Sbjct: 130 AGIT----------SLGFMFYPTYRLALVVIIAVALLVLFLVLYRTRLGLIVRAGIEDSV 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL   +    +  F + +   G AG   A                  V+ ++    +
Sbjct: 180 MVSSLGIDVYRVFMVVFGIGAMAAGFAGIVNAPVVSLTPDMGEAILVQTFVVVVIGG--V 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         I   ++ +   +N                    ++  A+ LV+L+R H 
Sbjct: 238 GSFPGAIIGGLIAGEIISITAMINPG--------------YAYIMLFAAMTLVLLLRPHG 283

Query: 339 LLRLRTPS 346
           LL  +  S
Sbjct: 284 LLGAQGRS 291


>gi|194289899|ref|YP_002005806.1| ABC transporter [Cupriavidus taiwanensis LMG 19424]
 gi|193223734|emb|CAQ69741.1| putative ABC transporteur, membrane component [Cupriavidus
           taiwanensis LMG 19424]
          Length = 342

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/322 (13%), Positives = 99/322 (30%), Gaps = 18/322 (5%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
             L    +       +     +I  + + GL++V G + +L+       A+GAY    + 
Sbjct: 37  FPLVGSPSTWLTLTIAGLAMGMIIFVVSSGLTLVFGLMDVLNFGHGAFIALGAYVAASVL 96

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI--ATLIMSEIFQNILIKWKPI 143
                 +        +   A  +   + +    G +        +  +  + ILI    +
Sbjct: 97  LPLAGWVEADSLALNLSVFALAIAAAMVAAGAVGLFFERVVVRPVYGQHLKQILITMGGM 156

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
              +  I        +   V +  R         I +  +  + LG+     +++L L R
Sbjct: 157 IIAEQLIKAIWGPETIALQVPTTFRGAVLLGDAAIEKYRLIAMALGLVI-FIAMLLLLNR 215

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T I    R   +N++   +L   +    +  F   +A  G+ G  +   +  I+      
Sbjct: 216 TRIGLLIRAGVENREMVEALGYRVRRLFVGVFVAGAALAGLGGVLWGLYQQNIT-AAIGA 274

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
             N+++  ++I+GG+ S +       ++  +      +                +     
Sbjct: 275 QVNVLIFIVIIIGGLGSTTGCFVGALLVGLMANYTGFLFPKVALFSNILLMMLILL---- 330

Query: 324 MVIALFLVILMRSHSLLRLRTP 345
                      R   L  +   
Sbjct: 331 ----------WRPQGLFPVARR 342


>gi|319442888|ref|ZP_07992044.1| ABC transporter [Corynebacterium variabile DSM 44702]
          Length = 352

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/330 (10%), Positives = 103/330 (31%), Gaps = 24/330 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +++ +    + AV   +L  +   + +S     ++        + A  + +++       
Sbjct: 29  MHRPELASVIGAVGVFVLFMVVAPSFRSLDSFATVLYVSSTLGIVALAVGLLM-IADEFD 87

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A    A +  ++  ++ +  W+   ++ +++ A G   G    K          +
Sbjct: 88  LSTGVAVTSTALAATMMNYQWHMQSWVGSLLALVLALAIGFFNGWMVTKTGVPSFL---I 144

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++       +           +         G      +   ++    V  ++ +++ +
Sbjct: 145 TLATFLMLQGLNLALTKRIMDAVSTKSIADMQGFEFCRKLFAGQWDVFGVTLKVTIFWWI 204

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +      +     +T   N    +  N +A  ++   +   K+  F V +A     G 
Sbjct: 205 LFVLVAHFLLF----KTKFGNWIFAVGGNPEASRAVGVPVDRVKIILFMVVAASCWFVGQ 260

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
                 D I       +E   +I+ V+      GG  +    A    I     +      
Sbjct: 261 HNLYEFDSIQAGQGVGNEFFYIIAAVVGGVAMTGGKGTAIGTAIGALIYGMTTQ------ 314

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
                 ++    + +     +  + L  V+
Sbjct: 315 -----GIVYAGWNPDWLKFFVGGVLLLAVL 339


>gi|120609971|ref|YP_969649.1| inner-membrane translocator [Acidovorax citrulli AAC00-1]
 gi|120588435|gb|ABM31875.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 294

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 96/298 (32%), Gaps = 26/298 (8%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           +    Y + + GL+++ G L +++      + +GA    + GS +G++ W+++  + ++ 
Sbjct: 20  VNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGALLTWMAGSYFGINYWVMLVAAPLVV 79

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
           G  G+++    L++      +  L+++     ++        G +G              
Sbjct: 80  GLFGVVIERLLLRWIYKLDHLYGLLLTLGLTLLIEGVFRSIYGVSG----------LGYD 129

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
              +        F+I   +  +V+     +       + +T +    R   +N +   + 
Sbjct: 130 TPELLEGATNLGFMILPNYRAWVVAASIVVCIGTWYVIEKTKLGAYLRAGTENPRLVEAF 189

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              +       +A  +A    AG   A                +  + +  +GGM S+  
Sbjct: 190 GINVPVMITLTYAFGAALAAFAGVLAAPVYQVTPLMGQNLIIVVFAVVV--IGGMGSIMG 247

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                  L  V            ++++                     +L+R   L  
Sbjct: 248 SILTGLGLGVVEGFTKVFYPEASSTVVFVIMVVV--------------LLIRPAGLFG 291


>gi|91976326|ref|YP_568985.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91682782|gb|ABE39084.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 292

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 83/290 (28%), Gaps = 22/290 (7%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+++ G + + +        +  Y    L + + +   L  P+        G +  
Sbjct: 23  VAVGLALIFGLMDITNFAHGEFLMLAMYVTFFLFAFFAIDPLLSAPLVGAAMFLFGAVAY 82

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           L  ++F       A    S I    +     +     G+          +   S +    
Sbjct: 83  LLVVRF-------AMRAKSNIGMVQIFTTFGLAILMRGLAQYFFTPDYRSINVSWLGGKT 135

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                +   +      L       ++  ++++T    A    R++  A   +        
Sbjct: 136 VSFGGIFLPVPQLVGALVSLAAFGALYFFIKKTDFGRALEATREDAGAVALVGIDKNKVF 195

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              + +  A +G+AGA  A             S  +I    V LGG  S+        I+
Sbjct: 196 ALGWGLGGALVGLAGAVMATFFYI--YPDVGASFALIAYVTVALGGFGSVFGAFAGGIIV 253

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             V      M      S+              +     LV+ +R   L  
Sbjct: 254 GLVEATTALMLPPSLKSVG-------------IYAVYLLVVFIRPRGLFG 290


>gi|260425609|ref|ZP_05779589.1| branched-chain amino acid ABC transporter, permease protein
           [Citreicella sp. SE45]
 gi|260423549|gb|EEX16799.1| branched-chain amino acid ABC transporter, permease protein
           [Citreicella sp. SE45]
          Length = 317

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 99/301 (32%), Gaps = 16/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y + A G  ++  S  + +    I     A + V L +    +   +I    ++
Sbjct: 28  LVSGILYALIALGFVLIYRSSRIFNFAQGIMVVFAALTLVGLHAMGVPAWICVILTLGVM 87

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 I  +      G    I  +    I   ++   + I  G+  + + D L     +
Sbjct: 88  FVLAVSIERVVLRPLVGQPDIILFMATIGITLFLIGLGEIIFGGENKVMITDELGIPTDS 147

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +             +I E      ++    L  +++ +L +T +  A R + D+ +A  S
Sbjct: 148 LVLEPW-----GGLLILEQKDITAVVVAALLVVALLAFLNKTRMGRAIRALGDDHQAALS 202

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +  ++    +  + ++     + G  + A                  + +++LGG+ S++
Sbjct: 203 VGISLQQIWVLVWFIAGIIALVTGIAWGAR---AGVSFALEVIAYKALPVLMLGGLESIT 259

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  ++  + +L                       T    +   +V+L R   L   
Sbjct: 260 GAIVGGLLIGMLEKLFEIY--------WGQPLLGGNTETWFAFVLALIVLLFRPQGLFGE 311

Query: 343 R 343
           R
Sbjct: 312 R 312


>gi|260430001|ref|ZP_05783976.1| inner-membrane translocator [Citreicella sp. SE45]
 gi|260418924|gb|EEX12179.1| inner-membrane translocator [Citreicella sp. SE45]
          Length = 290

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 82/307 (26%), Gaps = 27/307 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ S      +Y + A G +I+  +  +++        +G    V             +
Sbjct: 6   QFLFSGLTVGAVYALVALGFTIIYNASDVVNFAQGEFVMLGGMITVFAFEAGLPLPLAAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               + S     +  L     RG  +    +I       I    + +             
Sbjct: 66  LAILVTSAIGVALNKLAIEPARGAPVVSLIIITIGASIVIRGATQLV------------F 113

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   S                   +V+ G   +   + ++  RT    A     +N
Sbjct: 114 DKQLHRFPSFSGDDPIHVLGATILPQSLWVIGGALAVFVGLWIFFTRTLTGKAVLATANN 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +     +    +F +S+A    AG         +       +  +   +  +LG
Sbjct: 174 RVAAQLVGINTGWVMTLSFGLSAAIGAFAGVLVTP--ITLVGYDVGVALALKGFAAAMLG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM +         +L     L  G     +   + F             I +  V+ +  
Sbjct: 232 GMGNPKGALVGGLLLGCFEALTAGYLSSQYKEAVAF-------------IVILGVLFVMP 278

Query: 337 HSLLRLR 343
             L   +
Sbjct: 279 QGLFGSK 285


>gi|256113087|ref|ZP_05453964.1| Monosaccharide-transporting ATPase [Brucella melitensis bv. 3 str.
           Ether]
 gi|265994496|ref|ZP_06107053.1| monosaccharide-transporting ATPase [Brucella melitensis bv. 3 str.
           Ether]
 gi|262765609|gb|EEZ11398.1| monosaccharide-transporting ATPase [Brucella melitensis bv. 3 str.
           Ether]
          Length = 333

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 87/301 (28%), Gaps = 17/301 (5%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      S   + ++  +     + A G + V+ S G L L+     A  A   ++  + 
Sbjct: 38  IANPNFISIDNLLNVATRSAFIAIIALGATYVI-SSGGLDLSVGAMVAFVASIMILFMNS 96

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             ++  +L+ ++A++                     I   I +     I           
Sbjct: 97  GMIADPVLMLIAAVMLALVVGAACGLLNGIITTVGGIEPFIATLGTMGIYRGLTTW---- 152

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                         T+R+      +  ++    + +   ++ +   +A     L RT   
Sbjct: 153 -------LSQGGAITLRNPEIQSLYRPAYFGSVLGVPVPVIVIFVTAALAAFVLYRTRYG 205

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N+        ++   +  AF +    + +A   +       S       E  
Sbjct: 206 RHIIAVGSNEDVARYSGISVKKVRTIAFVIQGLCVAVAVLLYVPRLGSTSATTGLMWELQ 265

Query: 268 IVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V+      GG+  +        IL  +  +    +F     L     +  +    
Sbjct: 266 AITAVVVGGTTLRGGVGRIWGTICGAFILEIIGNIMLLSSFVSEYLLGAIQGAIIIIAML 325

Query: 323 L 323
           +
Sbjct: 326 V 326


>gi|90420076|ref|ZP_01227984.1| putative permease protein, ABC-type sugar transporter [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90335410|gb|EAS49160.1| putative permease protein, ABC-type sugar transporter [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 337

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 105/331 (31%), Gaps = 14/331 (4%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M + S  L     ++ + A+++ L++  F     S   +  +    L+  +FA G+ +V+
Sbjct: 1   MRLVSNALASPQGVVLIAAILFALVIGGFNPDFLSLATLVDLMRNSLVTGIFALGVMMVL 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
            S G+     V   AIGA++     +        +  +   +  A               
Sbjct: 61  ASGGI----DVSFTAIGAFAMYTTMTLVLGIDIPMPVLGLFVISALIGASLGLVNGLLIG 116

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
            L + TLI++    ++         G   I    R          +        + V   
Sbjct: 117 GLGLPTLIVTLGTLSLFRGALLTFVGTTYITTVPRNVISFARTMIVRME-----NAVGQL 171

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           + +    + +   + ++ + +  T        I  +++    +   +   K+  + ++  
Sbjct: 172 VSLPLSFVVLILAALAVGVLMNLTRFGRTIYAIGGSEEGARRIGINVSRVKIWIYVIAGT 231

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVV 295
             G+AG          +P      E  ++ ++V     I GG  ++        ++  + 
Sbjct: 232 IAGLAGMTHMTLSRMANPFDLVGIELNVIAAVVLGGARISGGHGTVVGTLLGALVITMIN 291

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
                     +   +       +     +VI
Sbjct: 292 TSLISAGVPSYWQKVVVGILIILGTGLPIVI 322


>gi|307326702|ref|ZP_07605895.1| inner-membrane translocator [Streptomyces violaceusniger Tu 4113]
 gi|306887686|gb|EFN18679.1| inner-membrane translocator [Streptomyces violaceusniger Tu 4113]
          Length = 347

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 97/305 (31%), Gaps = 24/305 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           S+        +  +    ++  L  ++        + I  + +   I V+ A G S+VV 
Sbjct: 23  SLVDAVFRAREISIAGALLLLVLFTWIAEPRFLGGQGIKDLLLNAAILVLLAVGQSVVV- 81

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
               + L+      + A++     S     +  ++ +  ++   CG++ G+     R   
Sbjct: 82  ITRNIDLSVGSVVGLSAFACGKFVSGTDHGVLTVLLLGLLVGAGCGVVSGVLVSFGRVPA 141

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           L +   ++  I                     D  +  G  + +               +
Sbjct: 142 LVVTLGMLYIIQ------------------GVDYWWAQGEQINAADVPQSVLDLGNGSVL 183

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            + Y+ L    + A+    LR          I  + +A       I    L A+  S A 
Sbjct: 184 GIPYLPLIAFAVLAATAYVLRTYRAGRELYAIGSSPEAARLAGVPIRRRVLGAYLFSGAV 243

Query: 242 IGMAGAFFAASRDRISPDMFKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVE 296
            G AGA + A    +  D     E      ++V  + I+GG  ++   A    +L  +  
Sbjct: 244 SGFAGALWLARFGTVVADNAHGWELTVVSAVVVGGVAIVGGTGTVWGAALGALLLTTIGS 303

Query: 297 LCCGM 301
               +
Sbjct: 304 ALAVL 308


>gi|300310064|ref|YP_003774156.1| sugar ABC transporter permease [Herbaspirillum seropedicae SmR1]
 gi|300072849|gb|ADJ62248.1| ABC-type sugar transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 344

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 92/295 (31%), Gaps = 27/295 (9%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             S +   ++  Q+ I ++ A G++ V+ + G + L+     A+ A              
Sbjct: 60  FASAENTMNILRQVAINLVLAAGMTFVILTAG-IDLSVGSVLAVSA-------------- 104

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            +L    ++ +     I            +  A + +      + I    +T G    + 
Sbjct: 105 -VLGMQVSLGAAPGWAIPMFIFSGLVMGMVNGAMVAL------LNINAFVVTLGTMTAFR 157

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                    T         F        + + +++     +     + LR+T +      
Sbjct: 158 GAAYLLADGTTVLNNDIPSFEWIGNGDFLHVPWLIWVAVAVVLLSWVILRKTVLGMHIYA 217

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +    L  +++S  F G+AGA  A+     + +     E   + ++
Sbjct: 218 IGGNLQAARLTGIRVGLVLLFVYSISGLFSGLAGAMSASRLYGANGNWGSGYELDAIAAV 277

Query: 273 V-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           V     ++GG+ S+        I+  +      +    F   +       +    
Sbjct: 278 VLGGTSLMGGVGSIWGTVVGALIIGVMNNGLTILGLSSFWQYVAKGAVIVLAVIL 332


>gi|160937755|ref|ZP_02085115.1| hypothetical protein CLOBOL_02648 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439400|gb|EDP17152.1| hypothetical protein CLOBOL_02648 [Clostridium bolteae ATCC
           BAA-613]
          Length = 286

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 87/301 (28%), Gaps = 26/301 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I      + A G+++V G +G+LS        I  +    L   +GL   + +P+   I
Sbjct: 12  IINGSTLALVAMGIALVWGVMGILSFTQGEFLMIAMFCSFYLNLYFGLDPIVSLPICMAI 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G I+    +        ++  +++     +L+    +                  T
Sbjct: 72  MFGIGFIVYKLIIARALRGPVLSQRLITFALSMVLVNLALL-----------LFSGDFKT 120

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +  +         F++         +    ++  + L+L +T    A R    N+ A   
Sbjct: 121 IPEVAISGSIDLGFMVLSKQKIVPFVISVCVAGFMFLFLNKTRTGKAIRATSMNKTAAGL 180

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +          AF +S+A  G AG                 +  +     V++GG  S+ 
Sbjct: 181 VGINPEKTYALAFGLSAAIAGAAGCALTYFYYI--YPNVGANFQLFGFIAVVMGGFGSIP 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  I+                                + +   L++  +   L   
Sbjct: 239 GAFFGGLIMGLADSFTGVYMN-------------TAFKYVGICVVFLLLVQFKPKGLFGG 285

Query: 343 R 343
           +
Sbjct: 286 K 286


>gi|58040648|ref|YP_192612.1| ribose ABC transporter permease [Gluconobacter oxydans 621H]
 gi|58003062|gb|AAW61956.1| Ribose ABC transporter, permease protein [Gluconobacter oxydans
           621H]
          Length = 340

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 90/310 (29%), Gaps = 26/310 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    V+             +   +  +   +    +   G SI++  LG L L+     
Sbjct: 36  VIAALVIIFGASCALSPHFLTTFNMVIIARALAFIGLVTIGQSILM-ILGELDLSVGAIG 94

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +      IL  + GL+ WL + +  ++ GACG++ G    + R   L            
Sbjct: 95  GLAGVVGGILMVQLGLNPWLSLGLCLLMGGACGLLNGALITQLRLHSLV----------- 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + I    +  G                V                 + +    L +    
Sbjct: 144 -LTIGMAGVYGGAN--------LVATKGVAITGVPRDITFLGRGLVMGVPVPFLVLLVCL 194

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A +   + RT +      I  N  A   L   +   ++ AFA++     +AG    A   
Sbjct: 195 AIVAFVMLRTPVGRYIYAIGSNPDAARMLGIRVNAIRMGAFALAGFLSALAGILMVARLG 254

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P +        + + VI      GG+ S         I+  + ++        +   
Sbjct: 255 TAQPSIGDTWVLGPIAAAVIGGVATTGGIGSPIGAVLGAVIIGIIEDIIVLFGISPYWQS 314

Query: 310 LKFDCSFNMR 319
           +       + 
Sbjct: 315 VVSGGIVVLA 324


>gi|39937080|ref|NP_949356.1| branched chain amino acid ABC transporter permease
           [Rhodopseudomonas palustris CGA009]
 gi|39650938|emb|CAE29461.1| possible branched-chain amino acid transport system permease
           protein [Rhodopseudomonas palustris CGA009]
          Length = 290

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 87/308 (28%), Gaps = 27/308 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ S      +Y + A G ++V  +  +++        +G    V   +         +
Sbjct: 6   QFLISGLTVGAVYALVALGFTLVYHASDVVNFAQGEFVMLGGMVTVFAYAAGLPLPLAAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +      ++  L     RG       +I       +    + +             
Sbjct: 66  LAVIVAVVVGLLLYWLAIAPARGASAVSLIIITIGASILLRGAAQIV------------F 113

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + +            + +    +VL G   +  ++   + RT I  A      N
Sbjct: 114 DKQFHKLPAFSGDAPIHLLGAVIQPQSLWVLGGAALVVLTLYYVMERTLIGKAVVATAAN 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +      AF  S+A   +AG         ++         +   +  +LG
Sbjct: 174 RLAARLVGVNVATVMALAFGGSAAIGAIAGILITP--ITLTSYDVGTLLALKGFAAAMLG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM +         +L  +     G     +   + F             I +  V+ +  
Sbjct: 232 GMGNPLGAVIGGLLLGLLESFGAGYVSSTYKDAIAF-------------IVILAVLFVAP 278

Query: 337 HSLLRLRT 344
             L+  RT
Sbjct: 279 QGLVGRRT 286


>gi|18310325|ref|NP_562259.1| beta-methylgalactoside transporter inner membrane component
           [Clostridium perfringens str. 13]
 gi|110799291|ref|YP_695993.1| beta-methylgalactoside transporter inner membrane component
           [Clostridium perfringens ATCC 13124]
 gi|168207592|ref|ZP_02633597.1| galactoside ABC transporter, permease protein [Clostridium
           perfringens E str. JGS1987]
 gi|168214900|ref|ZP_02640525.1| galactoside ABC transporter, permease protein [Clostridium
           perfringens CPE str. F4969]
 gi|169342485|ref|ZP_02863542.1| galactoside ABC transporter, permease protein [Clostridium
           perfringens C str. JGS1495]
 gi|182626469|ref|ZP_02954220.1| galactoside ABC transporter, permease protein [Clostridium
           perfringens D str. JGS1721]
 gi|18145005|dbj|BAB81049.1| probable galactoside ABC transporter [Clostridium perfringens str.
           13]
 gi|110673938|gb|ABG82925.1| galactoside ABC transporter, permease protein [Clostridium
           perfringens ATCC 13124]
 gi|169299383|gb|EDS81449.1| galactoside ABC transporter, permease protein [Clostridium
           perfringens C str. JGS1495]
 gi|170661059|gb|EDT13742.1| galactoside ABC transporter, permease protein [Clostridium
           perfringens E str. JGS1987]
 gi|170713680|gb|EDT25862.1| galactoside ABC transporter, permease protein [Clostridium
           perfringens CPE str. F4969]
 gi|177908209|gb|EDT70770.1| galactoside ABC transporter, permease protein [Clostridium
           perfringens D str. JGS1721]
          Length = 342

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/314 (12%), Positives = 89/314 (28%), Gaps = 7/314 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ V   + + +      S K   ++  Q    ++ A G+  ++ + G   L+     
Sbjct: 21  IYIVLVALLIGICIISPDFLSLKNFINILSQSSSRIIIALGVGGILLTEG-TDLSAGRTV 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     L      +  +   +  +      +I              + +      F 
Sbjct: 80  GLAAVVSASLLQAGDYAYKMYPNLPELPIFIPILIAMAVCGIVGLVNGLVVSKFNVPPFI 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE-IFMYYVLLGMCFL 193
             L     I    +  +       +     S         S  IY  I + Y+++    +
Sbjct: 140 ATLGMMTGIYGLNSIYFDRPPYGAMPIGGLSQSFSNFTLGSIPIYGNIKIPYLVIYAIIV 199

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
            A I     +T        I  N++A       ++   L  + ++    G AG   A   
Sbjct: 200 IAVIWTLWNKTKFGKNLYAIGGNREAAVVSGVNVVRTLLLVYMLAGVLYGFAGTLEAGRV 259

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              +    +  E   + S V+      GG+ ++  I     I   +      +    +  
Sbjct: 260 GSATASTGEMYELDAIASCVVGGVSTAGGVGTVPGIVTGVLIFQVINYGLAFIGVSPYLQ 319

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 320 FVIKGLIIVLAVAL 333


>gi|284029320|ref|YP_003379251.1| inner-membrane translocator [Kribbella flavida DSM 17836]
 gi|283808613|gb|ADB30452.1| inner-membrane translocator [Kribbella flavida DSM 17836]
          Length = 428

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/329 (10%), Positives = 93/329 (28%), Gaps = 7/329 (2%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           +     R   +  ++  +  +   L +   G T          +     ++      ++ 
Sbjct: 91  LRRVPQRYAGWLAVVLGVCFIGAFLCWAAAGKTFPLANQFQGTLNFATPLILGALAGVLC 150

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
              G++++     + +GA++  ++ S  G +   L+  +        ++           
Sbjct: 151 ERAGVINIAIEGQFLVGAFTAAVVASTTGSAAAALVAAALTGVLMAALLAVFSIKYLVNQ 210

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
            +    L++        +  + +      +     L  +       I F           
Sbjct: 211 VVLGVVLVVFASGITGYLFDQFLQEDAENLNTPAVLSAVKIPGLGDIPFIGPILFNQTVL 270

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +++ Y+ + +            +T      R + ++ KA  ++   +   + SA   +  
Sbjct: 271 VYLTYLAVAVVTFVLF------QTRWGLRVRAVGEHPKAADTVGIKVKRVRYSAVLWAGV 324

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
             G+ GAFF                  I ++ +I+ G         A        +L   
Sbjct: 325 LAGLGGAFFTVGYAGSFSKEMTAGNGFIALAALIM-GRWHPIGAMVAALFFGFATQLQSQ 383

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           +         +         T + V  L 
Sbjct: 384 LQIIQTPIPGELLLMAPYLATVIAVAGLV 412


>gi|326408565|gb|ADZ65630.1| monosaccharide-transporting ATPase [Brucella melitensis M28]
 gi|326538284|gb|ADZ86499.1| monosaccharide-transporting ATPase [Brucella melitensis M5-90]
          Length = 333

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 87/301 (28%), Gaps = 17/301 (5%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      S   + ++  +     + A G + V+ S G L L+     A  A   ++  + 
Sbjct: 38  IANPNFISIDNLLNVATRSAFIAIIALGATYVI-SSGGLDLSVGAMVAFVASIMILFMNS 96

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             ++  +L+ ++A++                     I   I +     I           
Sbjct: 97  GMIADPVLMLIAAVMLALVVGAACGLLNGIITTVGGIEPFIATLGTMGIYRGLTTW---- 152

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                         T+R+      +  ++    + +   ++ +   +A     L RT   
Sbjct: 153 -------LSQGGAITLRNPEIQSLYRPAYFGSVLGVPVPVIVIFVTAALAAFVLYRTRYG 205

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N+        ++   +  AF +    + +A   +       S       E  
Sbjct: 206 RHIIAVGSNEDVARYSGISVKKVRTIAFVIQGLCVAVAVLLYVPRLGSTSATTGLMWELQ 265

Query: 268 IVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V+      GG+  +        IL  +  +    +F     L     +  +    
Sbjct: 266 AITAVVVGSTALRGGVGRIWGTICGAFILEIIGNIMLLSSFVSEYLLGAIQGAIIIIAML 325

Query: 323 L 323
           +
Sbjct: 326 V 326


>gi|302385610|ref|YP_003821432.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
 gi|302196238|gb|ADL03809.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
          Length = 316

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 86/314 (27%), Gaps = 27/314 (8%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  + V   L   +          +  +  Q  IY + A G++ V+ S G + L+    
Sbjct: 19  LLVGILVALFLFFGMKSPVFLKVDTLMKLLKQASIYGIIAIGMTFVITSSG-IDLSVGSV 77

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             +      +      + + + I ++   S   G+  G+     +         I +   
Sbjct: 78  VGLSGIIVSMCMVNG-VPVLVSILIAIGASVLVGLFNGVLVHNAKVPPF-----IATMAS 131

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             ++     +  G   I                     F +      + +  + L    +
Sbjct: 132 MTVVRNVILLMTGAKTISNLP---------------QGFTAFASGSVLGIPNMFLTWLAI 176

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
               I    RT           N+++       I       +  S+   G+AG   AA  
Sbjct: 177 ITLGIFITGRTVFGRNIYAYGSNKESARLSGINISSTVYGVYIFSAIVCGIAGILMAARL 236

Query: 254 DRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
               P      E   + + V+      GG  S+        I+  + +    +    F  
Sbjct: 237 GNGVPTSGVGYELDAIAASVVGGASLDGGEGSVIGTVLGAMIMATLRQGGTLLGINSFIM 296

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 297 EIMIGSLIAIAVVI 310


>gi|294339493|emb|CAZ87852.1| putative ABC-type branched-chain amino acid transport system,
           permease component [Thiomonas sp. 3As]
          Length = 414

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/178 (11%), Positives = 55/178 (30%), Gaps = 15/178 (8%)

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                   +     + +  +Y V      L A+++  L  T +    R +RDN       
Sbjct: 150 TDRTAGPVWLGLDFLSQRQVYGVSAAYVLLGAALMRGLDGTRLDLLARAVRDNPLRVAVS 209

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
             T    +L    VS+   G++GA      +++S       ++ + +   +  G  +   
Sbjct: 210 GATPRRVRLQLVLVSAFLAGLSGALQTLRLEQVSAGSLGLPQSSMALLFSLAAGSGTAWG 269

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                 +++G   +   ++  +                  + +    +++     L  
Sbjct: 270 ALLGAGLMVGSESVLASVSQAW---------------MLYVGLGFLAIVIWAPQGLSG 312


>gi|149204643|ref|ZP_01881608.1| ABC branched-chain amino acid transporter, inner membrane subunit
           [Roseovarius sp. TM1035]
 gi|149141902|gb|EDM29952.1| ABC branched-chain amino acid transporter, inner membrane subunit
           [Roseovarius sp. TM1035]
          Length = 295

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/318 (13%), Positives = 100/318 (31%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           ++    +        +    I    Y + + GL+++ G L +++      Y +GA++  +
Sbjct: 1   MITIFGVPTAALFGQLLVGLINGSFYALLSLGLAVIFGLLRVINFAHGAQYMLGAFAAYL 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L    GL  W  + ++ +I G  G ++    L        +  L+ +      +      
Sbjct: 61  LSLWLGLGYWSALILAPVIVGLLGALVERTMLSRLYKLDHLYGLLFTFGLALTIEGTFRY 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G AG   A      G               F+   I+  +V++    +  ++ L + +
Sbjct: 121 FYGAAGQPYATPAALSG----------GVNLGFMFLPIYRGWVVVASLIVCIAVWLLIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T + +  R   +N     S    +       + + ++    AG   A             
Sbjct: 171 TKLGSYLRAATENPTLVQSFGVNVPLLLTFTYGLGASLAAFAGVLAAPIYQVSPLMGSNI 230

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
              +  + +V    M S+        +L     L                  +      +
Sbjct: 231 IIIVFAVVVVGG--MGSILGAIVTGYMLGIAEGLTKVF--------------YPEASNIV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           + + + +V+++R   L  
Sbjct: 275 VFVIMAIVLILRPAGLFG 292


>gi|108799748|ref|YP_639945.1| inner-membrane translocator [Mycobacterium sp. MCS]
 gi|119868858|ref|YP_938810.1| inner-membrane translocator [Mycobacterium sp. KMS]
 gi|126435389|ref|YP_001071080.1| inner-membrane translocator [Mycobacterium sp. JLS]
 gi|108770167|gb|ABG08889.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Mycobacterium sp. MCS]
 gi|119694947|gb|ABL92020.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Mycobacterium sp. KMS]
 gi|126235189|gb|ABN98589.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Mycobacterium sp. JLS]
          Length = 342

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 95/313 (30%), Gaps = 26/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ ++             + + + ++ +    + + A G ++V+   G + L+     
Sbjct: 42  MFIILLMVIFYFSYRSARFSTVENLITILVAAAPFALIALGQTLVI-LTGGIDLSVGSVI 100

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +           +W+ + V+  +    G + G+   +           I +    
Sbjct: 101 AVSAMAGAATAKANPGQVWMTVLVAMGVGLIVGSLNGIMVSRLNVPPF-----IATLGTL 155

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                   +  G A I                     F S      + +   +L M    
Sbjct: 156 TAGSGAAYVIGGGAPINGLPAE---------------FGSIANTKILGLQIPVLLMIIGI 200

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++ + ++RT        +  N+ A             S +A S    G++G   A+   
Sbjct: 201 IALAVIMKRTTYGMRVYAVGGNRNAAEIAGINAKNVLFSVYAFSGLLAGLSGVMLASRVI 260

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P++ +  E   + ++VI     +GG  ++   A    ++  +      +    +   
Sbjct: 261 SGPPNLGQGYELDAIAAVVIGGASLMGGRGTIWGTALGLLMIQTLNNGLDILVVPAYWQD 320

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 321 VIKGVLIVSAVAI 333


>gi|13474313|ref|NP_105881.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14025065|dbj|BAB51667.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 301

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/285 (12%), Positives = 78/285 (27%), Gaps = 2/285 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A+G  ++ G L   +L     +A    + ++  +     +WL + V
Sbjct: 8   VLNGLHSGALYALLAFGYVLINGILHRTNLAYGALFAFSGQAMILSVAFGYQVLWLTLLV 67

Query: 99  SAMISGAC-GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           S +       +   L S                       +    + +  + I       
Sbjct: 68  SVLFGVVAAFLYAALISHVLSRSVFEPLADRSPNAIVVTTLGILIVLSEASRIAADTHDL 127

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
           +L   +   I F           +        +    A       R++    WR + D+ 
Sbjct: 128 WLPPMLAQPIVFAEGAGFKATLTLIQVLDCAVVLAAVALATSAFARSSFGRRWRAVSDDP 187

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +A       +      A  +      +AG   +     +S         + ++ +  +GG
Sbjct: 188 RAAALCGVDVRGVFRHAVLLGGFCAALAGVMASLYYGNVSFGS-GLVYGLKILFVTAVGG 246

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
             S  + A   A       L  G     +     +     M    
Sbjct: 247 YLSPPRAALGAAAFGMAESLWAGYFPIEWRDAWMYLFLVAMLILI 291


>gi|170740546|ref|YP_001769201.1| inner-membrane translocator [Methylobacterium sp. 4-46]
 gi|168194820|gb|ACA16767.1| inner-membrane translocator [Methylobacterium sp. 4-46]
          Length = 297

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 95/301 (31%), Gaps = 22/301 (7%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           I   +Y + A    ++  +  +++        IGA+    L + Y L  W+ + V+    
Sbjct: 15  IVGALYGVVAMSFVLIYKASQVVNFAQGEFLLIGAWICWWLLTTYQLPFWVGMLVTFAFM 74

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
              G+ + +  L+       I+ ++++               G               +V
Sbjct: 75  LVFGIALQVVVLRPLIGEPIISVIMVTIGLSIFFQALCKWLFGVFAQPFPPIFSAQQVSV 134

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                   +  S                 + A+   + R +    A R    +Q+   SL
Sbjct: 135 LGFEFQSAYVMSLG-----------ISLAMMAAFAWFFRYSRHGLAMRATAFDQQVAQSL 183

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              +      A+A+S+    +AG          S         I V   VILGG+ S+  
Sbjct: 184 GIPVRNVFAMAWAISAVVSSVAGVVVGIVNGVSSALSLY---GIKVFPAVILGGLDSVVG 240

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                 ++  +  L   ++  Y +            +  +    L ++++++ + L   R
Sbjct: 241 AVIGGLVIGLLENLAQYVDGQYLHW--------GNLYEIVPFYVLVVILMIKPYGLFGTR 292

Query: 344 T 344
            
Sbjct: 293 D 293


>gi|312126726|ref|YP_003991600.1| inner-membrane translocator [Caldicellulosiruptor hydrothermalis
           108]
 gi|311776745|gb|ADQ06231.1| inner-membrane translocator [Caldicellulosiruptor hydrothermalis
           108]
          Length = 328

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 95/299 (31%), Gaps = 24/299 (8%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                 + + + +  + +    + A G+++V+   G + L+      + A     L   Y
Sbjct: 40  LSPNFLTAENLITTALGLAADGILAIGMTVVL-VSGGVDLSVGSVLGLSAVIAGGLYLSY 98

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
           G++IW+   ++ +I    G+  G    +     L +   +M                   
Sbjct: 99  GVNIWIGSLIALVICALIGLFNGYFIARIGIPPLIVTLAMMGIA---------------- 142

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
               A  +   G+ +        F        + + + +L    L       +R++A   
Sbjct: 143 --RGAAYVLTQGSPLSLYGNLKGFDFLGQGKVLGIPFFILFFIILIILFDFLMRKSAPFR 200

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               +  N+ A       +   K+S + + S   G+AG F  +     +P     SE   
Sbjct: 201 LVYYVGSNENAAKLSGINVPKVKISVYVLMSVLAGIAGIFTLSRFSVAAPTAGNGSELNA 260

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + VI      GG  ++      T ++  +      +N   +   L          T 
Sbjct: 261 ISACVIGGASLAGGEGTVLGAILGTILVGIINNALVLLNVSVYWQNLVSGVILIAAVTI 319


>gi|262274627|ref|ZP_06052438.1| ribose ABC transport system permease protein RbsC [Grimontia
           hollisae CIP 101886]
 gi|262221190|gb|EEY72504.1| ribose ABC transport system permease protein RbsC [Grimontia
           hollisae CIP 101886]
          Length = 333

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 96/313 (30%), Gaps = 28/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L  ++      L      +   + ++  Q     + A G+++V+   G + L+     
Sbjct: 36  IWLFLLLAIATFSLASPYFLTVNNLSNVLTQSAFIGILAVGMTLVM-INGEIDLSVGAIL 94

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+   S + +G +  + +W  + V+ +   A G++ G   +        +          
Sbjct: 95  AL--ASALAIGLQPHIGVWPAVFVALLSGTALGLLNGTLVVLSGMHSFIVTL-------- 144

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                      G  GI     +Y     +      +       +  I +  ++       
Sbjct: 145 ----------GGLIGIRGLVFIYTGENALMVEDFTYTEYPEMYLGPISITAIIFLGLT-- 192

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++   L  T        I DN +A       +   K+  F +      +AG   +    
Sbjct: 193 FALQWMLSHTRHGRETYAIGDNIEAAHEAGIRVKRHKVINFVICGTLAAIAGILLSMRLG 252

Query: 255 RISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+  K  E   +I++V+      GG  SL K       L  +      +N   +  L
Sbjct: 253 TAEPNAGKIWELWAIIAVVLGGTRLQGGYGSLWKTLGGILTLAVLQNGLRLLNTPNYIEL 312

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 313 MVMGSVLVLALLL 325


>gi|327190726|gb|EGE57806.1| sugar ABC transporter permease [Rhizobium etli CNPAF512]
          Length = 348

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/318 (12%), Positives = 94/318 (29%), Gaps = 14/318 (4%)

Query: 12  DKILCLLAVVYPLL--LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
             +L  +A+++ +L  +F+      + + +  + +Q+ +  + A G++ V+   G + L 
Sbjct: 26  AFVLVGIALIFEVLGWIFVGTSFLGNDQRLSIIILQVSVTGILAVGVTHVI-ITGGIDLA 84

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 + A     L         L   ++ +      M   L  L        +     
Sbjct: 85  SGSVVGLSAMVAASLAQGSADVRALYPGLTDLFPLWPIMAGLLVGLITGWISGFLIAKTG 144

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
              F   L              +   +  L      + + +      V   + ++  +  
Sbjct: 145 IPPFIATLGMMVCARGAAKWYTLGQPIGLLTPQFTWIGKSYLILGFPVPLPVLIFLGVAI 204

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  ++     + + T        I  N +A       I    +  + V+    G+AG   
Sbjct: 205 ISHIALGYTRYGKYT------YAIGSNPQAARVSGIDIGSHLIKVYIVAGVLSGLAGVVT 258

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AA      P M    E   + + VI      GG   ++     T IL  +      +   
Sbjct: 259 AARAASAQPTMGTAYELDAIAAAVIGGTSLAGGSGRITGTLIGTIILGVITSGFTFLKIG 318

Query: 305 YFNSLLKFDCSFNMRHTT 322
            +   +       +    
Sbjct: 319 SYYQEIIKGAIIVLAVVI 336


>gi|294339506|emb|CAZ87865.1| putative ABC-type branched-chain amino acid transport system,
           permease component [Thiomonas sp. 3As]
          Length = 311

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 57/336 (16%), Positives = 123/336 (36%), Gaps = 41/336 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L ++   L +LA++  + LFL             +   ++ +++ A GL+++ G  G L 
Sbjct: 7   LQRWRPGLIVLALLIAVFLFLPHVYGNES-----LLFTLMTFIVLAQGLNLLYGFTGYLP 61

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
              V  +  GAY+  +L    GL + L +    + +     ++  P L+  G Y +IA+L
Sbjct: 62  FGYVGFFGCGAYATSLLVLHSGLPVLLCVVGGGL-AAVVMGLILGPLLRLSGAYFSIASL 120

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             S+I   ++                                +      V      Y+ +
Sbjct: 121 AASQILYFVVSN--------------------TNLADITGGPYGLKIEQVYAPSASYHTM 160

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +  L+ ++  + R +A     R +R +  +   +   I+ A+L  + +S+   G+AG 
Sbjct: 161 LAVLVLATALAAYFRVSAFGMGLRAMRQDPVSASMVGINIVRARLITWLISAGVAGLAGG 220

Query: 248 FFAASRDRISPDM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
            +A +     P+  F    ++  I   + GG+ ++        +L              +
Sbjct: 221 AYAWNLSVFYPEAVFTLQISVFAIVFSLFGGVGTVIGPIIGAGVL--------------Y 266

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +       S       +    + L++L     +L L
Sbjct: 267 SLYSAIGISEPQYFQLIYGGLIVLLVLFMPGGVLSL 302


>gi|238758377|ref|ZP_04619555.1| Monosaccharide-transporting ATPase [Yersinia aldovae ATCC 35236]
 gi|238703500|gb|EEP96039.1| Monosaccharide-transporting ATPase [Yersinia aldovae ATCC 35236]
          Length = 308

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 87/292 (29%), Gaps = 18/292 (6%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  + L +      +   +  +     I  + A GL  VV   G + ++     AI  Y
Sbjct: 1   MLLAIGLSVKSPEFLTLGNLTDVATSYAILGILACGL-FVVLIAGGIDISFPAVTAIAQY 59

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                   +G S  L   ++  +    G++ GL     +      A +I           
Sbjct: 60  VMASWVITHGGSFPLAFVLAMAVGLVLGLVNGLLVYWLKV----PAIIITIATLNLFYGL 115

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
               TNG       D                   +    Y+  +   L  +        +
Sbjct: 116 LVYFTNGTWLYGFPDWFMTGINWFS--------FTGGDGYDYGLTLPLFCLAATIIFTGV 167

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +  T +      +  N+ A   L   I+   L  +       G+A    A     ++P+
Sbjct: 168 LMNYTRLGRQIFAMGSNKDAASRLGINILRLHLYVYGYMGLLAGVAAVVQAQISQSVAPN 227

Query: 260 MFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
                E  ++ ++V     + GG  +L+       +L  +      ++   +
Sbjct: 228 SLMGFELTVLAAVVLGGTSMSGGRGTLTGTVLGVMLLAFLQNGLTLLSVSSY 279


>gi|300313286|ref|YP_003777378.1| branched-chain amino acid ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300076071|gb|ADJ65470.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 288

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 93/305 (30%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +  + + GLS+ +G +  ++L       +G Y  V L +  G+     +P+
Sbjct: 9   LFDGIAYGSLLFLISVGLSVTMGMMNFINLAHGAFAMLGGYVCVTLLNGMGVPFLATLPL 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++     +       +  ++ S     + +       G     V    + 
Sbjct: 69  AFIAAAIVGLVLERSLYRRLYKASHLDQVLFSIGLTFMAVAGATWQWGPTQQPVVLPDWL 128

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                +    +  +++  +  ++ ++ L + RT      R   DNQ 
Sbjct: 129 RGQ----------ISLLGLEVGAYRVFLIGVVVIVTVALGLLIERTRFGAQIRASVDNQV 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +       FA+ S                     F     +  + +V +GG 
Sbjct: 179 AAAGLGINVSRVFSLTFALGSGL--AGLGGGLGIDVLGLDPTFPVKYMVYFLLVVAVGGA 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++     A  IL                               ++   + +++++    
Sbjct: 237 GTIKGPLLAALILGVFDVAGKYY--------------VPEIGAFVIYGLMVVLLILFPAG 282

Query: 339 LLRLR 343
           L+R R
Sbjct: 283 LMRRR 287


>gi|225390328|ref|ZP_03760052.1| hypothetical protein CLOSTASPAR_04081 [Clostridium asparagiforme
           DSM 15981]
 gi|225043600|gb|EEG53846.1| hypothetical protein CLOSTASPAR_04081 [Clostridium asparagiforme
           DSM 15981]
          Length = 331

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/314 (12%), Positives = 96/314 (30%), Gaps = 10/314 (3%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           IL +  ++  +++ +   +  S + +  + IQ    ++ A G+ +VV   G + +     
Sbjct: 14  ILYICLLIMIVIIAVISPSFLSARVLSDVLIQSAPKILLAMGM-LVVIIAGGMDMTVGRL 72

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             +GA     L  +        +     +     ++  L S+       A+  +I+S+  
Sbjct: 73  AGLGAVIAGTLAQQADYY----LKFWPGLGELPIIVPMLVSVAAGLMVGAVTGIIISKFR 128

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
               +    +     G  +         +         F        + + Y+++    +
Sbjct: 129 VPAFLAGLGMQLIIYGGNLLFLKKAPNNSQPLAGYKQSFVQFGTGSFMGISYLIIVALLV 188

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              + + L  T +      I  N++A            +  + +S A    AG   AA  
Sbjct: 189 MIFVFVLLNMTTLGKNIYAIGGNREAAKVAGINAFKIDMFVYMLSGALAAFAGCMLAART 248

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              +    +  E   + S +I      GG+ ++        I   +      +    +  
Sbjct: 249 GSANAAFAEGYEMDAIASCIIGGASFAGGIGNVPGAFLGVIIFSVINYGLTFVGLSSYWQ 308

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 309 FIVKGLIIIVAVAL 322


>gi|154244004|ref|YP_001414962.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154158089|gb|ABS65305.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 290

 Score = 55.3 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 98/304 (32%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   IY++ A   ++ +G L  L+ +    +  G         + G    L    
Sbjct: 6   IVNGLMLGAIYMLVAVAFTLAIGVLNFLNFSLPGLFMAGGML-AFGLMKAGWPFLLAAAG 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   +    +++   + +          L+ S  F  +L     +  G         L  
Sbjct: 65  ALAAAAFISLLVERFAYRPMQGGDPEVPLVSSLGFLVLLENLMLVQFGSDQQAFPALLPD 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L                 ++        L+    + A++   L +TA     RT+ ++++
Sbjct: 125 LN-----------LRLGGLVIGYAQLASLVLSLGIVAALSFVLAKTAAGRRIRTVAESRE 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   I       F  S+A   +AG  FA +  ++SP M         ++ +I+GGM
Sbjct: 174 TALLMGIDIARLVPQLFVASAALAALAGILFAVNYQQVSPFM-GEGVGFKGVAAMIVGGM 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++     +          +               +   L L++++R   
Sbjct: 233 GSIWGAVLGGLLIGLAEVVSISFIGADVVN-------------ITVYGLLLLILIVRPQG 279

Query: 339 LLRL 342
           L+  
Sbjct: 280 LMGR 283


>gi|183598912|ref|ZP_02960405.1| hypothetical protein PROSTU_02350 [Providencia stuartii ATCC 25827]
 gi|188021122|gb|EDU59162.1| hypothetical protein PROSTU_02350 [Providencia stuartii ATCC 25827]
          Length = 339

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 89/320 (27%), Gaps = 17/320 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  V+  L          +++ I ++  ++ IY + A G+++V+ + G + L+     
Sbjct: 26  VLIFMVLLVLFFQTQNSNFLTERNITNILTEVSIYGIMAVGMTLVILTAG-IDLSVGSIL 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +   +     L          M       I           +    T +    F 
Sbjct: 85  AVCAMTAAFVIKGDNLVGLDPNAWGGMSWLVGLAICLAVGTGIGFLHGLGITRLNIPPFI 144

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L            I     +       R   R      S           +     ++
Sbjct: 145 VTLGGMTIWRGLTLVINDGAPISGFDAGYRWWGRGELLGISVP---------IWIFAIVA 195

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L ++        +  NQ+A       +    +S + V     G+AG   +A   
Sbjct: 196 LIGYLALHKSRWGRFVYAVGSNQEAARLAGVNVKRVLVSVYVVIGCLAGLAGFVLSARLG 255

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                    +  + VI+ V++GG +                 +   +      + L    
Sbjct: 256 SAEAVA-GMTFELRVIASVVIGGTS------LMGGYGRIGGTIIGSIIMGILINGLVLMN 308

Query: 315 SFNMRHTTLMVIALFLVILM 334
                   +  + + L +  
Sbjct: 309 VSAYYQQIITGLIIILAVAF 328


>gi|162146186|ref|YP_001600645.1| ribose transport system permease [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161784761|emb|CAP54301.1| putative ribose transport system permease protein
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 391

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/339 (11%), Positives = 92/339 (27%), Gaps = 32/339 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L +V     F    +  S     ++        + A  +++++   G   L+     
Sbjct: 54  IGGLVLVGIFFAFTADRSMFSLNGGLAIMNPSAQLGIMAVAVALLM-IGGEFDLSIGSMV 112

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A    ++ I   ++ L + L I ++ +++   G I G   +  R     +       +  
Sbjct: 113 AFSGLAFGIFLLQWHLPLLLSILLTLVVAAIVGTINGQLVIWTRLPSFIVTLAFFFILRG 172

Query: 135 NILIKWKPITNGKAG--------------IYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
             L+  K +T G                    +   +       +               
Sbjct: 173 LSLVGLKAVTGGTTQLRGFTEAASDSIFTPLFSGFAFGGPFRWAAHHGLIALLPDGTPAA 232

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             +   ++    L+A     L +T + N       + +A  +    +   K   F +++ 
Sbjct: 233 PGIPIAVMWFVGLTALSTWCLLKTKLGNWIFASGGDPRAARNSGVPVDQVKTGLFILTAC 292

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVV 295
              + G                  E   VI+ VI      GG  S         I   V 
Sbjct: 293 AAALVGILTVLDAGSTDAMRGTQKEFQAVIAAVIGGCLLTGGYGSTLGAFFGAIIFGVVS 352

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
                           +    +      + + L + ++ 
Sbjct: 353 IGLS------------YTTFDSDWFQVFLGVMLLIAVIF 379


>gi|148254177|ref|YP_001238762.1| high-affinity D-ribose ABC transporter membrane protein
           [Bradyrhizobium sp. BTAi1]
 gi|146406350|gb|ABQ34856.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Bradyrhizobium sp. BTAi1]
          Length = 365

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/325 (8%), Positives = 81/325 (24%), Gaps = 15/325 (4%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
              + L  +   +L+        ++  + ++        +   G++ V+   G + L+  
Sbjct: 34  TAYVTLALIALIILMSFASPYFLTEGNLQNVAKNFSFIAIATLGITFVI-ITGGIDLSVG 92

Query: 72  IAYAIGAYSYVILGSRYGLSI---------WLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
                 A    ++ +                     + + +    +++           L
Sbjct: 93  SLMCFAAMITSMVMTTLSTPGAPLSSLFVHLAADGKTVVANVPGLILVVSVLAGLVVSVL 152

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
                 M      +      +        +   +     +         F +        
Sbjct: 153 VGLVNGMCIAILGLSPFVTTLGMLSIVRGLCYVISNGRGSFPGGPDAEYFYALTQGDLWG 212

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +    + +  L+  + + L  +A       I  N+KA      ++   K+  + + +   
Sbjct: 213 LPAPFIYLVMLALVMAVVLHHSAFGRHVFAIGGNEKAAELTGISVTRVKIEVYVIGALAA 272

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVEL 297
           G+ G   +        +M    E  ++ + VI      GG+           +L  +   
Sbjct: 273 GLQGIIISGWLGSAPANMATSYELNVIAAAVIGGANLAGGIGGPLGAIVGCVLLEVIRNG 332

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTT 322
                   +                
Sbjct: 333 LVLAQVNSYWQQTLVGVIIIAAVLV 357


>gi|158316941|ref|YP_001509449.1| inner-membrane translocator [Frankia sp. EAN1pec]
 gi|158112346|gb|ABW14543.1| inner-membrane translocator [Frankia sp. EAN1pec]
          Length = 437

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/336 (12%), Positives = 94/336 (27%), Gaps = 49/336 (14%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  VV   +         +   + ++ +Q+      A G+ +V+  LG + L+     
Sbjct: 69  VIVGLVVIWTIFQFQNSNFLTSYNLTNLALQVAATGTIATGVFLVL-LLGEIDLSVGWVS 127

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A    +L  R+G +  L I  + ++  A G + G     F      +          
Sbjct: 128 GLCASVMAVLSVRHGWAPVLAIVAALVVGVAVGALQGSLFAVFGVPSFVVTLAGFIAWQG 187

Query: 135 NILI------------------------------------------KWKPITNGKAGIYV 152
             L                                           +   +   +     
Sbjct: 188 VQLKVLGRDGSLNLPDSEITKLTSTFFTDATGWVIAGIAVAGYAGAQLAEVRGRRRAGLR 247

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
              +  +   V  +        + +  +  +   LL    L   + L  RRT+       
Sbjct: 248 PRPIAEVAVRVVVVGGALIAAVAILNDDRGLPLALLIFGCLVLLVDLVSRRTSYGRHLYA 307

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +  N +A       +   ++SAFA +S   G+ G   AA    ++         +  I+ 
Sbjct: 308 VGGNVEAARRAGINVRALRVSAFAAASCLAGVGGVLAAARLTSVTQASGGSDTLLNAIAA 367

Query: 273 VIL------GGMTSLSKIAKATAILIGVVELCCGMN 302
            ++      GG            ++  +      + 
Sbjct: 368 AVIGGTSLFGGRGRAWSALLGILVIGSIANGMDLLG 403


>gi|314965779|gb|EFT09878.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL082PA2]
 gi|315094460|gb|EFT66436.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL060PA1]
 gi|327328955|gb|EGE70715.1| ribose ABC transporter, permease protein [Propionibacterium acnes
           HL103PA1]
          Length = 333

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 97/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +   I ++GIQ  +  + A+G++ V+ + G + L+     
Sbjct: 35  ALVGLIILCIALFIATPVFLTVPNIINIGIQAAVVAIMAFGMTFVIVTSG-IDLSVGSVA 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A     + S  GL  WL + +  +I    G + GL     +                
Sbjct: 94  ALSAMVSAWMFSNAGLPGWLTLIIGLLIGLLAGAVSGLAIAYGKLPAFI----------- 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  + +      +        +   ++ +    
Sbjct: 143 -----------ATLAMMSVARGLTLVISGGTPVATSDAVNQLGADVGPVPVPVIMLALAG 191

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N++A       +    ++ +A++  F G+AG   A    
Sbjct: 192 VVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALAGVFAGLAGLVLAGRLS 251

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLS-----KIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + + VI G   S              +L  +      +N   F   
Sbjct: 252 SAQPQAGFGYELDAIAAFVIGGASLSGGSGKASGTFVGAVLLAVIRNGLNILNVSSFWQQ 311

Query: 310 LKFDCSFNMR 319
           +   C   + 
Sbjct: 312 VVIGCVIALA 321


>gi|302388154|ref|YP_003823976.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
 gi|302198782|gb|ADL06353.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
          Length = 344

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/319 (13%), Positives = 107/319 (33%), Gaps = 13/319 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++  V   +++       +   I ++     +  +   G+ ++    G + L+     A
Sbjct: 24  FIIVFVLIFMVYALTSNGLTWSGIMNIFRHSAVVGIIGLGMGLIC-MTGEIDLSVGSMLA 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +   VIL +     +      + ++       +   +      Y+ +   I++     
Sbjct: 83  LNSGLSVILFNITDSIL------ATLVFALLFGAVCGLANGLLVGYVKMPAFIVTLATML 136

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I   +           +A     +   ++ L  +  F        + +  V + + F++A
Sbjct: 137 IFRSFAQYICQHIDKALAGGGSSVYRMIKELSSYQPFYGLGNGKVLTIPIVGVILIFITA 196

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +     T        +  N K        +   K+S FA+     G+A   + A    
Sbjct: 197 LFVYITTSTKYGKKVYAVGSNAKGAQMAGINVSLMKVSVFALGGILTGLASFLWVAMNAS 256

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
             P     S  +  I+ V+LGG++       +      +  L   M++   + ++     
Sbjct: 257 SDPATTGNSYEMYAIAAVVLGGIS------MSGGKGKCLGILFGAMSYTIIDKIIVALKM 310

Query: 316 FNMRHTTLMVIALFLVILM 334
            ++ +  +  I L LVI++
Sbjct: 311 DSLINDAIKGIILILVIVV 329


>gi|299531990|ref|ZP_07045389.1| inner-membrane translocator [Comamonas testosteroni S44]
 gi|298720026|gb|EFI60984.1| inner-membrane translocator [Comamonas testosteroni S44]
          Length = 305

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 51/308 (16%), Positives = 114/308 (37%), Gaps = 25/308 (8%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
            L       Y   + + +L+Y + A   ++  G    +SL  V  + +GAY+  +     
Sbjct: 21  MLPFGIESDYSLGLYLNMLMYSVLATAWALFSGPTRYVSLASVAFFGMGAYAAAV--LGE 78

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
            +S  +++  +  I     +++GL +L+  G Y  I +  ++E+ + ++  ++   +   
Sbjct: 79  VVSWPVVLLAATGIGIVMSLLVGLATLRLSGVYFVIFSFGLAELVKQLVSWYEVKFSKVL 138

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G YV   +       + L          V+                        R+ +  
Sbjct: 139 GRYVTADVTTQDIYWQLLALLAFILLIRVLIS----------------------RSRLGL 176

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENI 267
           A R I +++     +      AK+  F +S++F+ +AGA  A     + P   F  + + 
Sbjct: 177 ALRVIGEDETVARHVGINTTTAKVLLFMLSASFMTLAGAIMAPRWTYLDPSIAFSATVSF 236

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             + + +LGG ++L         L+ + E   G    ++  LL       +      ++ 
Sbjct: 237 QTLIMALLGGASALFGPILGAVPLVLLFEYLSGNFPNHYPILLGLIFILIVYLLPNGLVG 296

Query: 328 LFLVILMR 335
               +  R
Sbjct: 297 AVAQLRRR 304


>gi|291457018|ref|ZP_06596408.1| ABC transporter, membrane spanning protein [Bifidobacterium breve
           DSM 20213]
 gi|291381429|gb|EFE88947.1| ABC transporter, membrane spanning protein [Bifidobacterium breve
           DSM 20213]
          Length = 343

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/324 (13%), Positives = 111/324 (34%), Gaps = 14/324 (4%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           + N  +K L ++ V Y +++ +      S   +  +        + A G+ +++   G +
Sbjct: 15  KFNSMEKTLMVIIVAYAIIVSVINPNFLSLGTLADLTRNGTGMAILAAGVYVIM-IAGGI 73

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            ++      +  Y+ V++  R G+   L I V A + GA    +    + +      I T
Sbjct: 74  DVSFPAVAIMSGYTSVVIAVRTGIDSMLFIVVVAALIGALLGTVNALLIHWLELPTFIVT 133

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L  S IF  ++                  +  +  ++ S  R+     +    +  +   
Sbjct: 134 LGTSSIFYGLMTTLVG--------TKPVTISQMPKSMLSFGRWNVISFTVKGQQNGIAGF 185

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            L    + A++   +  T + ++   I +++++      + +  KL  + +      +  
Sbjct: 186 FLIAVIVYAAVWFVMNHTTLGHSVYAIGNSEESARRAGLSPLHIKLFIYPLMGVLAALMA 245

Query: 247 AFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
               ++   + P     +E  ++ ++V     I GG  +L       A++  +      M
Sbjct: 246 IISFSNLKFVDPTSIMGTELTVIAAVVIGGTRITGGYGTLLGTFLGVALVQLLNNTLVFM 305

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMV 325
                 + L            +  
Sbjct: 306 GIQSSWNNLFIGAVMIAAVVVIYY 329


>gi|156742274|ref|YP_001432403.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941]
 gi|156233602|gb|ABU58385.1| inner-membrane translocator [Roseiflexus castenholzii DSM 13941]
          Length = 289

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 80/270 (29%), Gaps = 10/270 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +      + + G S+  G   +L++       + AY      +R+G+   L +PV
Sbjct: 9   LTSGLLIGSALAVLSVGFSMAWGITHVLNVAHCAFAVLAAYLGYWSLNRWGIDPLLALPV 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +    GM M    ++          L                        +      
Sbjct: 69  MLPLFFLLGMAMHTLLIRATARRAHDLGLATMV--------LTFGLGVVMENGMQLAWTP 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +++      F    +I +               ++ L+  RT +  A R +     
Sbjct: 121 DPRVLKTAYSSLTFTLGPLIVQAPHLVAFGLAGLTIGALYLFAERTFMGRAVRAVWQQPM 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   +      A+ ++ A   + G   +             S  + V  +VILGG+
Sbjct: 181 GAALSGIDLDRVTTIAYGLAVATAAVGGVAMSLLYTF--DPASHLSWLVYVFLVVILGGV 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            S+   A A  I+  ++          +N+
Sbjct: 239 GSILGSALAGLIIGLIIGASSVFIPLAWNN 268


>gi|146278255|ref|YP_001168414.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025]
 gi|145556496|gb|ABP71109.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17025]
          Length = 329

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/324 (12%), Positives = 102/324 (31%), Gaps = 33/324 (10%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA--------------------Y 79
            +  +  ++Y + A G  ++  + G+ +    +     A                    +
Sbjct: 14  LNGLMAGVMYALVALGFVLIFKASGIFNYAQGVLALFAALTLVGLQNGQIPFAHLINATF 73

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +    + L   + I ++A++      ++    LK   +   I   + +      L  
Sbjct: 74  GTKLHHFGWTLPSVVAIALTALVMVGLAYLIERLVLKHLVNQEPIILFMATIGLAYFLEG 133

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +  G     +   L    +     +    F   F I ++ +    L    L A++ L
Sbjct: 134 LGDVMWGADIKKLDVGLPQGISESIESVTDAWFGYGFFIDKLDV-VAALVAAALVAALTL 192

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           + + T    A R + D+ +A  S+  ++ F  +  ++++     +AG  +          
Sbjct: 193 FSQYTKYGRALRAVADDHQAALSVGISLRFVWVLVWSIAGFVALIAGIMWGTKSGVQFSL 252

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                  +  + +++LGG TS+        I+    +L             +   +    
Sbjct: 253 S---LIALKALPVLMLGGFTSIPGAIVGGLIIGMGEKLFEFFAGPLIGGATENWFA---- 305

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
                 +   L ++ R   L   R
Sbjct: 306 -----YVLALLFLVFRPQGLFGER 324


>gi|327310793|ref|YP_004337690.1| branched-chain amino acid transport permease [Thermoproteus
           uzoniensis 768-20]
 gi|326947272|gb|AEA12378.1| branched-chain amino acid transport permease protein [Thermoproteus
           uzoniensis 768-20]
          Length = 333

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 95/321 (29%), Gaps = 11/321 (3%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           LL  +F         +    +   +Y + + GLS+   +  + S       A+GAY+   
Sbjct: 14  LLRAMFNTYDFVNNVLVPAIVYSNVYALASIGLSMTYITTKIPSFAHGDLAAVGAYAAFY 73

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L       +W      AM + A    +             I       +          +
Sbjct: 74  LLYFLYGGLWPGSVYLAMPAAALAGAVAAYLSYVGVFRPLIRRGASITVLMIASFGLHFL 133

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL--LGMCFLSASIILWL 201
             G   I  +      G   R+ +          + +     V   + +  + A++   L
Sbjct: 134 IFGILAILDSIAQTVYGWNTRNFLLSPGEIRIPGLTQSQTTAVTSTIALVLVLAALYYLL 193

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            RT      R   DN     +L   +      ++ +  A  G+AG + A        +  
Sbjct: 194 NRTKFGVVMRASIDNAPLAKALGIDVERVYALSWLIIGAVTGIAGIYMAMIFPV--TEEL 251

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            +    ++   V++GG+ S+          +    +        FN +L      +    
Sbjct: 252 GWLRLPLIFVAVVVGGLASIY-------GGVIGGYIVGFSMVLGFNYILNPLGLPSEYEL 304

Query: 322 TLMVIALFLVILMRSHSLLRL 342
            +    +   +L+    +  L
Sbjct: 305 AIPFAIVIATLLLAPQGIAGL 325


>gi|238782946|ref|ZP_04626974.1| Monosaccharide-transporting ATPase [Yersinia bercovieri ATCC 43970]
 gi|238716149|gb|EEQ08133.1| Monosaccharide-transporting ATPase [Yersinia bercovieri ATCC 43970]
          Length = 309

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 90/303 (29%), Gaps = 18/303 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++  + L +      +   +  +     I  + A GL  VV   G + ++     AI  
Sbjct: 1   MLLLAIGLSVKSPEFLTLGNLTDVATSYAILGILACGL-FVVLIAGGIDISFPAVTAIAQ 59

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y        +G S  L   ++  +    GMI GL     +      A +I          
Sbjct: 60  YVMASWVITHGGSFALAFILAMAVGLVLGMINGLLVYWLKVP----AIIITIATLNLFYG 115

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               ITNG       D                   +    Y+  +   L  +   +    
Sbjct: 116 LLVYITNGTWLYGFPDWFMTGINWFS--------FTGSDGYDYGLTLPLFCLAATTIFTG 167

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + +  T I      +  N+ A   L   I+   L  +       G+A    A     ++P
Sbjct: 168 VLMNYTRIGRQIFAMGSNKDAASRLGINILRLHLYVYGYMGILAGVAAVVQAQISQSVAP 227

Query: 259 DMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           +     E  ++ ++V     + GG  +L+       +L  +      ++   +   +   
Sbjct: 228 NSLMGFELTVLAAVVLGGTSMSGGRGTLTGTVLGVMLLAFLQNGLTLLSVSSYWHTVFSG 287

Query: 314 CSF 316
              
Sbjct: 288 VII 290


>gi|221066312|ref|ZP_03542417.1| inner-membrane translocator [Comamonas testosteroni KF-1]
 gi|220711335|gb|EED66703.1| inner-membrane translocator [Comamonas testosteroni KF-1]
          Length = 446

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 110/324 (33%), Gaps = 19/324 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L      L  +      +     +M  QI   ++     +I++G  G+LS    +   +
Sbjct: 33  ILVWGLFALALIVAPLIFTSSLALTMLSQIGYLIIICLSYNILLGQGGMLSFGHAVYTGL 92

Query: 77  GAYSYVILGS-----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           G++  +   +        + + L+  V  +       + G  + K  G   A+ T+ + E
Sbjct: 93  GSFLAIHAMNKAAAGEIAIPLVLIPIVGGLAGMFFAALFGYVTTKKSGTTFAMITMGLGE 152

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +  ++ + +     G+ G             + +   + +F        + +YY++   C
Sbjct: 153 LVASMALMFPEFFGGEGG-------------ITTDRVYSKFFGLDFGSGLQVYYLIAVYC 199

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           F+  + +     T +      +RDN +    +       +  AF ++  F G+ G   A 
Sbjct: 200 FVCTAAMFAFTGTPLGRMLNAVRDNPERVEFVGYNTQRVRYFAFIIAGFFAGIGGGLTAI 259

Query: 252 SRDRIS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           + + I+  D      +   +    LGG T          +L+    L   +   +   L 
Sbjct: 260 NFEIITAMDSVSVVRSGGYLLFTFLGGATFFFGPIIGAVLLVLASVLLSELTKAWLLYLG 319

Query: 311 KFDCSFNMRHTTLMVIALFLVILM 334
                  M     +   + + + +
Sbjct: 320 LVFLLMVMYAPGGVASLIMMNLRV 343


>gi|73537840|ref|YP_298207.1| inner-membrane translocator [Ralstonia eutropha JMP134]
 gi|72121177|gb|AAZ63363.1| inner-membrane translocator [Ralstonia eutropha JMP134]
          Length = 287

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 93/305 (30%), Gaps = 26/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +  + + GLS+ +G +  ++L       +G Y  V+L +R G+   L + +
Sbjct: 8   LFDGLAYGSLLFLISVGLSVTMGLMNFVNLAHGAFAMLGGYVAVVLMNRAGVPFLLSLLI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   + A G ++     +       +  ++ S     + +       G     V      
Sbjct: 68  AFAGAAAAGWVLERTLYRRLYQASHLDQVLFSIGLTFMAMAGANYLFGPGQQPVELPAAL 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                V   ++  +++  +  ++A++   + RT      R   DNQ+
Sbjct: 128 RGQ----------VRVGGVDLGVYRLFLIGVVVAITATLGWLVARTRFGAQVRAAVDNQQ 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +       FA+ S                     F     +  + +V +GG 
Sbjct: 178 AARGLGINVDRVFSLTFALGSGL--AGLGGGLGVDMLGLDPAFPLKYMVYFLLVVAVGGA 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  +L                               ++   + L++++    
Sbjct: 236 GSIRGPLLAALVLGVADVAGKYYVPAVGA--------------FVIYAMMVLLLVLFPAG 281

Query: 339 LLRLR 343
           L   R
Sbjct: 282 LYGRR 286


>gi|319794134|ref|YP_004155774.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315596597|gb|ADU37663.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 298

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 93/305 (30%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+L+          A ++V L  R       L+  
Sbjct: 13  LIGGLLSGVMYSLVAIGFVLIYKTSGVLNFAQGAQLLFAALTFVSLVERGVPFALALLLT 72

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A++     +I                 +    +   I    + +               
Sbjct: 73  FALMVLLGLVIERTVLRPLVNQPPITLFMATLGLSYVIEGVAQLVWG------------T 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F  +       + A++  + R T +  A+R + D+  
Sbjct: 121 QVHALELGIADEPLQFLGIMVSTFDLFAAATAGVMVAALSAFFRYTRVGLAFRAVADDTY 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +     + +A +     +AG  + A               +  + +++LGG 
Sbjct: 181 AAIAVGLRLPRIWATVWAAAGVIALVAGLLWGARLGVQFSLS---LVVLKALPVLVLGGF 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  + +L       +    ++   +          +A    +L+R   
Sbjct: 238 DSILGAIVGGLVIGALEKLAEVYIGPFVGGGIESWFA---------YVAALAFLLIRPSG 288

Query: 339 LLRLR 343
           L   +
Sbjct: 289 LFGQK 293


>gi|260463288|ref|ZP_05811489.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
 gi|259030878|gb|EEW32153.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
          Length = 351

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/334 (12%), Positives = 105/334 (31%), Gaps = 18/334 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFL----GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++  ++ L+ V    ++F           +   I ++   +    + A G++ V+ + G 
Sbjct: 30  RFQSLIGLVLVAIGGIIFSPRRHGEILFLNPDNIANIVRAVSETGIIAIGMTFVIITAG- 88

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+      + +     +    G  +   I    ++    G + G  S +FR +   + 
Sbjct: 89  IDLSVGAVLGLSSVVTASMMISGGFGLIPTILAVLVMGIVFGTLQGTISTRFRLEPFIVT 148

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L   +        +     +         L           ++   +  
Sbjct: 149 -----------LAGLQAARGLALVVSGNQYINISYGDGPGLAPPVFAVLGERLFNNTVPV 197

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
             L     +A   + L  T        +  N++A       +   K+S +A++     +A
Sbjct: 198 ATLVFIVFAAIATVVLNTTRFGRYVFAVGGNERAARISGVPVSMVKISVYAITGFAAALA 257

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G   A   +  S +       +  I+ V++GG TSL   A +    +    +   +    
Sbjct: 258 GIVHAGQFNFGSAND-GMGYELTAIAAVVIGG-TSLFGGAGSMVGTVAGTIMLGALANIL 315

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
             + +            +++ A+   ++ R   L
Sbjct: 316 QLNNITPAMQLLATAAIIVLAAVLQSLVRRREGL 349


>gi|146343567|ref|YP_001208615.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. ORS278]
 gi|146196373|emb|CAL80400.1| putative branched-chain amino acid ABC transporter, permease
           protein [Bradyrhizobium sp. ORS278]
          Length = 308

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 96/290 (33%), Gaps = 15/290 (5%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           V G + L++L     Y +GAY                    + + G    +     L   
Sbjct: 31  VFGIMDLVNLAHGSLYMMGAYFAAT----------FAAWTGSFVLGGIMALGATLLLGIV 80

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
            ++ A+  L   +   ++L  +  I      + +      L   V S + F       + 
Sbjct: 81  LEFTALRHLYGRDHLDHVLATFGLILFFNEAVRLIWGPAGLSLPVPSWLSFPVTIPPGIQ 140

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
           Y  +   +++    ++  + L + RT I    R    N++   +L   I       F + 
Sbjct: 141 YPAYRLAIIVVALLVALLLYLGVMRTRIGMLIRAGASNREMIGALGINIKLLYTLVFGLG 200

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           +A  G+AG   A             +  I+   ++++GG+ S+     A  ++  +  + 
Sbjct: 201 AALAGLAGLMQAPILTV--QIGMGENILILAFVVIVIGGIGSIRGAFVAAIMIGLIDTMG 258

Query: 299 CGMNFYYFNSLL---KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                     +L       +     + L+ + + +V++ R   L      
Sbjct: 259 RAFLPNLLRQVLNSAAASTAAPAMSSMLIYLLMAIVLVARPEGLFPANRR 308


>gi|312863982|ref|ZP_07724218.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus vestibularis F0396]
 gi|322517544|ref|ZP_08070413.1| ABC superfamily ATP binding cassette transporter permease protein
           [Streptococcus vestibularis ATCC 49124]
 gi|311100395|gb|EFQ58602.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus vestibularis F0396]
 gi|322123804|gb|EFX95378.1| ABC superfamily ATP binding cassette transporter permease protein
           [Streptococcus vestibularis ATCC 49124]
          Length = 646

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 92/308 (29%), Gaps = 34/308 (11%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
              + +   Q L++ + A G+ I    L L  L    A+ +GA +  I+  R        
Sbjct: 348 SNVVLTAISQGLLWAIMAIGVFITFRILDLADLTAEGAFPLGAATTTIMIIRGIN-PIFA 406

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
                +     G + G    K +   L    + ++ ++   L+         +G      
Sbjct: 407 TLGGFVAGMLAGAVSGFMHTKMKIPALLTGIITLTGLYSVNLLVLGSANVSLSGHN---- 462

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                +     +  + L    L   +++ L  T +  A R   D
Sbjct: 463 -----------TLVTMVMDLGLSKLNGVILLGLIFVSLVVLMLVVLLNTQVGLALRATGD 511

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N     +    +   K+  + +S+  I ++GA  A +      +M   +    + +I   
Sbjct: 512 NLAMGEANGIKVDRMKILGYMISNGLIALSGALLAQNNGYADMNMGTGTIVNGLAAI--- 568

Query: 276 GGMTSLSKIAKATAILIGVV------ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
                      A  I+  +        +  G   Y    ++    + + +   L    L 
Sbjct: 569 ---------ILAEVIVKYLPLGKRLWSIVVGAVLYRLVLVIILAMNVDAQMLKLASAILL 619

Query: 330 LVILMRSH 337
            +IL    
Sbjct: 620 AIILYVPE 627


>gi|300690834|ref|YP_003751829.1| transmembrane abc transporter protein [Ralstonia solanacearum
           PSI07]
 gi|299077894|emb|CBJ50533.1| putative transmembrane abc transporter protein [Ralstonia
           solanacearum PSI07]
          Length = 289

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 93/305 (30%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        +  +   GLS+ +G +  ++L        G Y  V+L +R G+     +P+
Sbjct: 8   LFDGLAYGCLLFLIGIGLSVTMGLMHFINLAHGAFAMAGGYVCVVLMNRLGVPFLATLPI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + + A G ++     +       +  ++ S     + +       G +   V      
Sbjct: 68  AFLATAAAGFVLERTLYRRLYRASPLDQVLFSIALVFMAMAGATYVWGPSQQPVELP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L    R   + +    +  +++  +  L+  +   + RT      R   DNQ+
Sbjct: 125 -----EALRGQLRVFDTGLEVGRYRLFLVGVVVVLTVLLAWLIERTRFGAQVRASVDNQQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   +       FA+ S                     F     +  + +V +GG 
Sbjct: 180 AAAGLGINVGLVFSVTFALGSGL--AGLGGGLGIDVLGLDPAFPIKYMVYFLLVVAVGGA 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  +L                               ++   + L++ +    
Sbjct: 238 GSIKGTLLAALVLGVFDVAGKYY--------------VPEVGAFVIYGLMVLLLALFPSG 283

Query: 339 LLRLR 343
           LL  R
Sbjct: 284 LLGRR 288


>gi|312196953|ref|YP_004017014.1| ABC transporter [Frankia sp. EuI1c]
 gi|311228289|gb|ADP81144.1| ABC transporter related protein [Frankia sp. EuI1c]
          Length = 919

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 111/305 (36%), Gaps = 12/305 (3%)

Query: 23  PLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV 82
            + L +       Q    ++    LI ++    L ++V   G +SL  +   A+GA ++ 
Sbjct: 315 LVALGVLAVIPVVQAGHLAVWSAALIDIILFLSLGLLVRQSGQISLCHLGFAAVGAAAFS 374

Query: 83  ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
            L     L   + + ++ +I+   G ++ +P+++  G +LA+ATL    I + +    + 
Sbjct: 375 HLAVGAHLPWLVALLLATLIAIPVGALVSIPAVRLSGVFLALATLGFGLILEEVFYTRRF 434

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +    +      R               R     +  +   YY++L +  L   ++  + 
Sbjct: 435 MFGTTSIGVPDPRP------------LVRLGGWDLSSDRGFYYLILVVVVLVVLVVTAIS 482

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           R+ +      + D+  A  +  TT    K+  F V++A   +AGA             F+
Sbjct: 483 RSRLGRLLEAMADSPVALETHGTTSTVLKVLVFCVAAAMASLAGALTGMLYQYSVASYFQ 542

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
              ++ ++++V++  +        A      +       +   +  +L    +    +  
Sbjct: 543 SFSSLTLVALVVIVTVGDPWYAVIAAIGYSVLPGYITSSDAATYLQVLFGVGAALAAYGV 602

Query: 323 LMVIA 327
                
Sbjct: 603 RAGTV 607



 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/266 (9%), Positives = 72/266 (27%), Gaps = 13/266 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            ++        +Y M   GL +   + G+ +       A+  + +  L +         +
Sbjct: 6   PFLVIGLASGAVYGMAGLGLVLTYKTSGVFNFGYGAVAALDVFLFYYLRTE--------L 57

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++  ++    + +  P L    + LA +    S+  + +      +     G       
Sbjct: 58  GLAWPLAALVSVGVFAPLLGLGLERLARSLENASDTIKVVATIGLVLIVAGLGQLWHPTT 117

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             +    +I ++   L      A +  +     +    R + D+
Sbjct: 118 APTFPHFLPRSTVRLLGVNVTWEQIIIFLFALAAS---AVLYRFFLSVRLGVVMRGVVDD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           Q          +  +  A+ + + F  +AG   A         +          +   +G
Sbjct: 175 QDLVAMCGDDPVRVRRWAWVIGAVFASVAGLMLAPGLALDGVTLTTAVFAAFGAAA--IG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMN 302
             + L        ++     +     
Sbjct: 233 YFSHLPLTFAGGLVIGVAGAIVDKYG 258


>gi|146340378|ref|YP_001205426.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. ORS278]
 gi|146193184|emb|CAL77196.1| putative branched-chain amino acid ABC transporter, permease
           protein [Bradyrhizobium sp. ORS278]
          Length = 296

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 92/305 (30%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+L+          A ++V L  R       L+  
Sbjct: 11  LVGGLLSGVMYSLVAIGFVLIYKTSGVLNFAQGAMLLFAALTFVSLVERGTPFALALLAT 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A++      I                 +    +   I    + +               
Sbjct: 71  LAIMVALGITIERAVLRPLINQSPITLFMATLGLSYVIEGAAQLLWG------------T 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   +    F    V    F  +       + A   L+ R T    A+R + D+Q 
Sbjct: 119 QVHGLEIGVSDIPFDIGGVFISRFELFAAAVAGSMVALFTLFFRYTRTGLAFRAVADDQF 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +     + +  +     +AG  + A               +  + +++LGG 
Sbjct: 179 AALAVGLRLPRVWAAVWTAAGIVALVAGLLWGARLGVQFSLS---LVVLKALPVLVLGGF 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++       ++  + +L       +F   ++   +          +    ++L+R   
Sbjct: 236 DSITGAIVGGLLIGAIEKLAEVYVGPFFGGGIEAWAA---------YVVALALLLVRPSG 286

Query: 339 LLRLR 343
           L   +
Sbjct: 287 LFGQK 291


>gi|318058191|ref|ZP_07976914.1| sugar uptake ABC transporter permease protein [Streptomyces sp.
           SA3_actG]
          Length = 320

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 87/290 (30%), Gaps = 31/290 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    VV  L+   F     S +   +  +Q+   V+ A G+++ +G+ G + L+     
Sbjct: 25  VYAGVVVLLLVNIAFTPHFLSTENFRTQAVQVAPIVIVALGMALAIGTEG-VDLSVGAVM 83

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      +      +   L+  +  +++G     +                +    +  
Sbjct: 84  ALATSLLSLYLGYGLVVALLMAALGGVLAGLASGALVAFVGVQPIVATLALMVSGRGLAL 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +L + K + N                            +      + + Y+++    L+
Sbjct: 144 VLLPQLKDVRNS------------------------GMNTLGTGSVLGIPYLVIIAAVLA 179

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   +RRT        I D++ A       +    +  + VS     +AG    A   
Sbjct: 180 VVVAFVVRRTTFGRQLLAIGDSRAAAKLAGLPVRRVLVIVYVVSGLLAAVAGILATARLQ 239

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELC 298
              P        +  I+ V++      GG   +        ++  +    
Sbjct: 240 ASDPTSLGTLMELSAITAVVVGGTPLSGGRVRIGGTVAGAVLIQLLTATL 289


>gi|296111330|ref|YP_003621712.1| ribose ABC transporter permease [Leuconostoc kimchii IMSNU 11154]
 gi|295832862|gb|ADG40743.1| ribose ABC transporter permease [Leuconostoc kimchii IMSNU 11154]
          Length = 328

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 87/312 (27%), Gaps = 23/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  +V  ++  +          + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 29  VLALIVLVIITTIMNRNFLDPNNLLNLLRQVSINGLIAFGMTFVI-LTGGIDLSVGAILA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +    ++ +    ++  ++    +     G+   + +          A  I S     
Sbjct: 88  LTSALSAMMITSGVPTVIAMVIGIVIGGLLGGVNGLIITKG------GAAPFIASLATMT 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I      +      I                  FF  P   +I  I    + + +     
Sbjct: 142 IFRGATYVFTDGNPITGKIMNNSFMFQFIGRGYFFGIPVPVIIMLIAFLILFILL----- 196

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +         +  N+KA F     +   K   + +S      AG    +    
Sbjct: 197 ------HKMTFGRKTYALGGNEKAAFVSGIKVNLTKTWIYVISGIMSSAAGMILISRLSS 250

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             PD     E   + ++V     + GG   L        I+  +      +    F   +
Sbjct: 251 AQPDAGTGFEMDAIAAVVLGGTSLAGGRGRLFGTLIGALIIGTLNNGMNLIGISSFYQQI 310

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 311 VKGIVIIIAVLL 322


>gi|282864176|ref|ZP_06273233.1| inner-membrane translocator [Streptomyces sp. ACTE]
 gi|282561254|gb|EFB66799.1| inner-membrane translocator [Streptomyces sp. ACTE]
          Length = 354

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 99/324 (30%), Gaps = 37/324 (11%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++  +          S      + IQ     + A G+++V+   G + L+    +
Sbjct: 51  VLAVLLIVVIAASFIYPTFASLDNARGVTIQASFLAVVALGMTLVI-ITGGIDLSVGSVF 109

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+G                  + V  ++ GA G++ GL              LI      
Sbjct: 110 ALGGVLAAWASQYG---FLAALLVPLVVCGAIGLLNGL--------------LIARGNMA 152

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +I    +   +  +            V     F       V    +   + L +    
Sbjct: 153 PFIITLATLLGARGLLLALTDEGATTYLVPKDSAFGELGQGSVWGFGYPIIIALVLFGAG 212

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             ++   +RT+       +  +  A   +   +   K+  + +S    G+AGA  AA   
Sbjct: 213 GLVL---QRTSFGQTLFAVGGSSDAATLMGLPVARTKILVYTLSGLLAGLAGALNAARLS 269

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                +    E   + ++VI     +GG  S+S       +L  +  L            
Sbjct: 270 SGVTIIGVGMELDAISAVVIGGTLLIGGAGSISGTLWGVLLLAVIQNLIN---------- 319

Query: 310 LKFDCSFNMRHTTLMVIALFLVIL 333
            +     +   + +    L +V++
Sbjct: 320 -QIGSLNSSYQSVVSGGFLIVVVV 342


>gi|149375097|ref|ZP_01892870.1| putative ABC-transporter [Marinobacter algicola DG893]
 gi|149360986|gb|EDM49437.1| putative ABC-transporter [Marinobacter algicola DG893]
          Length = 214

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 56/182 (30%), Gaps = 15/182 (8%)

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              ++     F      +      YY+ L   F +      L R+         + N   
Sbjct: 40  FIFMKPETSIFGLSFLNLDDPQHFYYLALFSLFNTLVFFKVLLRSRFGRIVEATKQNPDR 99

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   I   +++ + + S     AG  FA     ++P    +  +   + + ILGG+ 
Sbjct: 100 TEALGYNIFAFRITCYVIGSTLGAYAGFLFALQYGFVNPSFLAWEMSGTALVMSILGGLG 159

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           ++      T    G+      +   +                  M  A+ L++++    +
Sbjct: 160 TIYGAILGTFAYEGLQYFFEHLTEEW---------------LLFMGSAIILMVMLLRKGI 204

Query: 340 LR 341
             
Sbjct: 205 AG 206


>gi|134300362|ref|YP_001113858.1| inner-membrane translocator [Desulfotomaculum reducens MI-1]
 gi|134053062|gb|ABO51033.1| ribose ABC transporter membrane protein [Desulfotomaculum reducens
           MI-1]
          Length = 313

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/320 (10%), Positives = 87/320 (27%), Gaps = 27/320 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + +Y     L  ++  + L        +   + ++  Q+ I  +   G++ V+   G + 
Sbjct: 8   IQRYHLGPFLGLLIIIVALTFLSDRFFTTSNLLNVARQVSINTLLGVGMTFVI-LTGGID 66

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+          +   ++ +++    +   A  +   + +      Y  +A  
Sbjct: 67  LSVGSILALAGALGAGFLGQGNTTLMVVLYACLIGLLAGTVNGTIVA------YGRVAPF 120

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I +     +      I                            F      Y   +   +
Sbjct: 121 IATLATMTLFRGATLIY---------------TEGRPVRAVAEGFNELGGGYLGAIPTPV 165

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +    +       L +         +  N++A           K+  +++S    G+AG 
Sbjct: 166 IITSVIVLLAWFVLTQMTPGRRIFALGGNEEAAILSGIRTNHYKIMVYSISGLLAGLAGV 225

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
             ++      P      E   + ++VI      GG   +        I+  +      +N
Sbjct: 226 ILSSRLLSAQPTAGIGYELDAIAAVVIGGTSLTGGQGGVIGTLIGALIIGVIDNGLNLLN 285

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F           +    
Sbjct: 286 VSSFYQQAVKGLIILVAVLL 305


>gi|312142559|ref|YP_003994005.1| inner-membrane translocator [Halanaerobium sp. 'sapolanicus']
 gi|311903210|gb|ADQ13651.1| inner-membrane translocator [Halanaerobium sp. 'sapolanicus']
          Length = 324

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/317 (10%), Positives = 87/317 (27%), Gaps = 27/317 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y  I  ++ +V+ + L        S     ++  Q+ +  +    L+ V+ + G + L+ 
Sbjct: 22  YKYIYLVIILVFVVALTFLSPHFFSYNNFINIFRQVSVNFILGVALTYVIITAG-IDLSV 80

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A    +  +     G   ++L  + A++ G+   ++    +        IATL M 
Sbjct: 81  GSILAFAGVTAGLFLRTGGN--FILAILIALLIGSICGLINGILVSKAKLAPFIATLGMM 138

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            I + + +      +          L         +          +   +         
Sbjct: 139 SIARGLALVVTSGNSITIDNVNYTFLGSGIIYSIPMPVIIAIIVLLISSFVL-------- 190

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                      ++T        I  + +A       +    +  + +S    G+A     
Sbjct: 191 -----------KKTWFGRYLYAIGGSHEASRLSGIKVDKLIMITYTISGFLSGLAAVVLT 239

Query: 251 ASRDRISP-----DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A      P              ++    ++GG  ++        ++  +      +    
Sbjct: 240 ARLWSAPPIAGQGYELDAIAAAVIGGASLMGGKGTILGTLYGAMVIGIIRNGLNLLGVSS 299

Query: 306 FNSLLKFDCSFNMRHTT 322
           F   +       +    
Sbjct: 300 FLQQVVIGVIIILAVFL 316


>gi|260465473|ref|ZP_05812663.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259029777|gb|EEW31063.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 298

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/317 (12%), Positives = 95/317 (29%), Gaps = 27/317 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILG 85
           F         +   +  +   +Y + A GLS++ G++ L+ L       + AY    +  
Sbjct: 3   FNIPPPDILLQLSLNGALGGAMYGVAAVGLSLIFGTMRLIFLAQGAMIILAAYFVRALFY 62

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
                    L+ V  +      +I      K         +L+++     ++     +  
Sbjct: 63  GLGIDPFLSLLIVVPVGLVVGWLIYQGLFRKAAAAEDRNISLLIAVGLMFLIQNLMTVVW 122

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G                + +           V          L     +  ++L+LR+T 
Sbjct: 123 GGN-----------TAAIVTSYTASGIEILGVRTSFTRSMGFLIALAGTGLVVLFLRKTL 171

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +  A R   ++ +A   +  +       AFA+  A  G AG   A +          F  
Sbjct: 172 VGKAVRAASEDMEAATLMGISPHRVNAIAFAIGIALAGAAGVAVATTFPF--NPFAGFIF 229

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           ++  +  + LGG+ +++       +L  +           + + + +             
Sbjct: 230 SLKALVALALGGIGNVAGALAGGILLGLIEAYVQYFISGGWTNAIAYG------------ 277

Query: 326 IALFLVILMRSHSLLRL 342
                V++ +   L   
Sbjct: 278 -VFLAVLMFKPEGLFSR 293


>gi|116250680|ref|YP_766518.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115255328|emb|CAK06403.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 352

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 89/305 (29%), Gaps = 25/305 (8%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++   ++ L   A      + ++  Q  +  + A G  +V+     + L+     A+   
Sbjct: 45  IMLIAVVSLITPAFLKPVNLGNILAQTAVIAVVAMGQQLVI-LTRGIDLSVGSNLALATV 103

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              ++  +   SI ++I    +   A G + GL  +  R  +  I TL    I + + + 
Sbjct: 104 IGGLVYQQVDSSI-VVIMAMLLAGAAIGAVNGLVFVYGRLPHPFIITLATLSICRGLALA 162

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
             P      G+  A                    +      + +      +       ++
Sbjct: 163 LAPGHTTMRGMPDA------------------VTAIGGGTTLGVPNSFFAVAMFGLLFLI 204

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
             +          +     A  S+   +    L+ + +     G+     A      SP 
Sbjct: 205 LTKSMVFGRWIYAVGGAPNAARSMGIPVKGVLLATYIICGFCAGVGAVLLAGRTAAASPI 264

Query: 260 MFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                E   + +++I     LGG   L        ++  +      +    F  ++    
Sbjct: 265 YGNLLELDTIAAVIIGGASFLGGRGHLGHALIGAVLIGVIRNALNLLGVDVFFQMIAIGL 324

Query: 315 SFNMR 319
              + 
Sbjct: 325 VIVIA 329


>gi|325962290|ref|YP_004240196.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468377|gb|ADX72062.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 352

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/330 (12%), Positives = 100/330 (30%), Gaps = 13/330 (3%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           + F   L + +    + A+V  +                ++        + A G+S+++ 
Sbjct: 22  NPFQKLLARPEVGALVGAIVLFVFFASVSQTFIQPNAFATVLYGSSTIGIMAVGVSLLM- 80

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G   L+  +A    A +  +    + +++W+ + ++ ++S A G I G   +K +   
Sbjct: 81  IGGEFDLSTGVAVISSALTASMFSWYFSMNVWVGVVLALVVSLAIGFINGWILMKTKLPS 140

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
               TL    +   + +    +  G         +              +     V   +
Sbjct: 141 FI-VTLATFLMLTGLNLGLTRMIGGGVSSPSISDMDGYQAARAIFASSVKIGGVDVNNTV 199

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
           F++  L+ +            RT + N    +  +  A  ++   +   K+  F      
Sbjct: 200 FIWIALVAVASWVLL------RTKVGNWIFAVGGDANAARAVGVPVKATKIGLFMAVGFC 253

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
             + G     + D +       +E + +I+ VI      GG  S    A    I     +
Sbjct: 254 GWILGMHNLFAFDAVQSGEGVGNEFLYIIAAVIGGCLLTGGYGSAVGGAIGAFIFGMANK 313

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
                 +              +     + +
Sbjct: 314 GIVYAQWNPDWFKFFLGLMLLLATIVNLYV 343


>gi|225852075|ref|YP_002732308.1| monosaccharide-transporting ATPase [Brucella melitensis ATCC 23457]
 gi|256044252|ref|ZP_05447156.1| ribose ABC transporter permease [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256264419|ref|ZP_05466951.1| tetracycline resistance protein TetB [Brucella melitensis bv. 2
           str. 63/9]
 gi|260563605|ref|ZP_05834091.1| tetracycline resistance protein TetB [Brucella melitensis bv. 1
           str. 16M]
 gi|265990662|ref|ZP_06103219.1| monosaccharide-transporting ATPase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|225640440|gb|ACO00354.1| Monosaccharide-transporting ATPase [Brucella melitensis ATCC 23457]
 gi|260153621|gb|EEW88713.1| tetracycline resistance protein TetB [Brucella melitensis bv. 1
           str. 16M]
 gi|263001446|gb|EEZ14021.1| monosaccharide-transporting ATPase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263094712|gb|EEZ18491.1| tetracycline resistance protein TetB [Brucella melitensis bv. 2
           str. 63/9]
          Length = 333

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 87/301 (28%), Gaps = 17/301 (5%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      S   + ++  +     + A G + V+ S G L L+     A  A   ++  + 
Sbjct: 38  IANPNFISIDNLLNVATRSAFIAIIALGATYVI-SSGGLDLSVGAMVAFVASIMILFMNS 96

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             ++  +L+ ++A++                     I   I +     I           
Sbjct: 97  GMIADPVLMLIAAVMLALVVGAACGLLNGIITTVGGIEPFIATLGTMGIYRGLTTW---- 152

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                         T+R+      +  ++    + +   ++ +   +A     L RT   
Sbjct: 153 -------LSQGGAITLRNPEIQSLYRPAYFGSVLGVPVPVIVIFVTAALAAFVLYRTRYG 205

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N+        ++   +  AF +    + +A   +       S       E  
Sbjct: 206 RHIIAVGSNEDVARYSGISVKKVRTIAFVIQGLCVAVAVLLYVPRLGSTSATTGLMWELQ 265

Query: 268 IVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V+      GG+  +        IL  +  +    +F     L     +  +    
Sbjct: 266 AITAVVVGGTALRGGVGRIWGTICGAFILEIIGNIMLLSSFVSEYLLGAIQGAIIIIAML 325

Query: 323 L 323
           +
Sbjct: 326 V 326


>gi|209544547|ref|YP_002276776.1| Monosaccharide-transporting ATPase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209532224|gb|ACI52161.1| Monosaccharide-transporting ATPase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 391

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/339 (11%), Positives = 91/339 (26%), Gaps = 32/339 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L +V     F    +  S     ++        + A  +++++   G   L+     
Sbjct: 54  IGGLVLVGIFFAFTADRSMFSLNGGLAIMNPSAQLGIMAVAVALLM-IGGEFDLSIGSMV 112

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A    ++ I   ++ L + L I ++ +++   G I G   +  R     +       +  
Sbjct: 113 AFSGLAFGIFLLQWHLPLLLSILLTLVVAAIVGTINGQLVIWTRLPSFIVTLAFFFILRG 172

Query: 135 NILIKWKPITNGKAG--------------IYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
             L+  K +T G                    +   +       +               
Sbjct: 173 LSLVGLKAVTGGTTQLRGFTEAASDSIFTPLFSGFAFGGPFRWAAHHGLIALLPDGTPAA 232

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             +   ++    L+      L +T + N       + +A  +    +   K   F +++ 
Sbjct: 233 PGIPIAVMWFVGLTTLSTWCLLKTKLGNWIFASGGDPRAARNSGVPVDQVKTGLFILTAC 292

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVV 295
              + G                  E   VI+ VI      GG  S         I   V 
Sbjct: 293 AAALVGILTVLDAGSTDAMRGTQKEFQAVIAAVIGGCLLTGGYGSTLGAFFGAIIFGVVS 352

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
                           +    +      + + L + ++ 
Sbjct: 353 IGLS------------YTTFDSDWFQVFLGVMLLIAVIF 379


>gi|312277617|gb|ADQ62274.1| ABC transporter permease protein [Streptococcus thermophilus ND03]
          Length = 646

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 91/308 (29%), Gaps = 34/308 (11%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
              + +   Q L++ + A G+ I    L L  L     + +GA +  I+  R        
Sbjct: 348 SNVVLTSISQGLLWAIMAIGVFITFRILDLADLTAEGTFPLGAATTTIMIIRGIN-PIFA 406

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
                +     G + G    K +   L    + ++ ++   L+         +G      
Sbjct: 407 TLGGFVAGMFAGAVSGFMHTKMKIPALLTGIITLTGLYSVNLLVLGSANISLSGHN---- 462

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                +     +  + L    L   +++ L  T +  A R   D
Sbjct: 463 -----------TLVTMVMGLGLSKLSGVILLGLIFVSLVVFMLVVLLNTQVGLALRATGD 511

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N     +    +   K+  + +S+  I ++GA  A +      +M   +    + +I   
Sbjct: 512 NLAMGEANGIKVDRMKILGYMISNGLIALSGALLAQNNGYADMNMGTGTIVNGLAAI--- 568

Query: 276 GGMTSLSKIAKATAILIGVV------ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
                      A  I+  +        +  G   Y    ++    + + +   L    L 
Sbjct: 569 ---------ILAEVIVKYLPLGKRLWSIVVGAVLYRLVLVMILAMNVDAQMLKLASAILL 619

Query: 330 LVILMRSH 337
            +IL    
Sbjct: 620 AIILYVPE 627


>gi|91779517|ref|YP_554725.1| ABC sugar transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91692177|gb|ABE35375.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia xenovorans LB400]
          Length = 333

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 97/306 (31%), Gaps = 27/306 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             +L  L      + +   ++  QI   V+ + G++ V+   G + L+     A+GA   
Sbjct: 40  MIVLFSLLSSHFLTYETFSTIANQIPDLVVMSIGMTFVLIIAG-IDLSVGSVLALGAALT 98

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +   ++         +    +   G + G  ++ +R       +L + E  + +  +  
Sbjct: 99  SVAALQWHWPALPAALLGMAGATLTGCVTGAITVAWRIPSFI-VSLGVLEAARGLAYQLT 157

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
                  G                   F   P +F I   F+  +++ +           
Sbjct: 158 NSRTAYIG---------------DAFDFLSNPIAFGISPAFIIAIVVMVAAQFVL----- 197

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            RT        I  N++A           K++ FA+     G+A  F  +  +   P+  
Sbjct: 198 TRTVFGRYLVGIGTNEEAVRLAGVNPRPYKIAVFAMMGLLAGLASLFQISRLEAADPNAG 257

Query: 262 KFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +  E  ++ ++VI     +GG  S++       I+  +      +        +      
Sbjct: 258 QGIELQVIAAVVIGGTSLMGGRGSVTSTFFGVLIISVLAAGLAQIGATEPTKRIITGAVI 317

Query: 317 NMRHTT 322
            +    
Sbjct: 318 VVAVVL 323


>gi|326403559|ref|YP_004283641.1| sugar ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|325050421|dbj|BAJ80759.1| sugar ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 349

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/318 (10%), Positives = 87/318 (27%), Gaps = 19/318 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLF-LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           L+++ +I  L  ++  + +F +      S+    +     + Y++   G + V+   G +
Sbjct: 31  LSRHGEIWTLFILLALIAVFGIASPDFFSRASWLATSQFAVEYLLLGLGETFVI-ITGGI 89

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+      +      +            +  + + + A         +       A+  
Sbjct: 90  DLSVGAILGLSGMVGGL------------VMRALIHAHAANGETIAAGIAAALASGALVG 137

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
            +   +   + +    +T G   I         G      I      +       +M   
Sbjct: 138 WVNGTLITRLRLTPFVVTLGMLSICTGGIYLLNGGRNVGTIPDIVGTAGSFAIGGWMPVT 197

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L          + L +T        +  N          +    +  + ++     +AG
Sbjct: 198 VLVAAVFCIICAVVLAQTRFGLRTYAVGSNPLGAGRAGIDVRRHLVRIYTLAGFLAAVAG 257

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
               A     S       E   + ++VI      GG  ++        ++  +V     +
Sbjct: 258 LMVMARFASASVQAGANDELDAITAVVIGGASLFGGRGTILGTVVGGFVITVMVTGLILI 317

Query: 302 NFYYFNSLLKFDCSFNMR 319
               F   +       + 
Sbjct: 318 GVQPFWQQVAVGAILILA 335


>gi|222102694|ref|YP_002539733.1| ABC transporter membrane spanning protein (ribose) [Agrobacterium
           vitis S4]
 gi|221739295|gb|ACM40028.1| ABC transporter membrane spanning protein (ribose) [Agrobacterium
           vitis S4]
          Length = 325

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 95/312 (30%), Gaps = 27/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V   +    +    S++ + ++  Q  I    A G+++V+   G + L+     A
Sbjct: 28  LIGLIVIMAVFAALVPGFLSERNLTNILQQSSINACLALGMTLVI-ISGGIDLSVGPTAA 86

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I A     L                +++G     +          Y+ +   I++    +
Sbjct: 87  IAAVMTATLLLGGTPIPLA------ILAGLGVGAVCGFINGVLVAYIGLQPFIVTLGTLS 140

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  I  G   +                     F + F    I +   +L +  +S 
Sbjct: 141 TYRAIALIFTGGNPVLGIPP---------------GFRALFNGTLIGLPIPVLIVAGVSV 185

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +  + L++T I      +  N++A +     I   K++A+ +S     +A          
Sbjct: 186 AAWVLLKKTPIGEYLMAVGGNEEAAYVAGVPIARTKITAYVISGGLAALASLILIGRLGA 245

Query: 256 ISPDMFKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P +    E        +    ++GG  S+        IL  +      MN   F  LL
Sbjct: 246 AEPILGNLWELDAIAAAAIGGASLMGGKGSIVGTILGAIILGAMRNGLTLMNVQAFYQLL 305

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 306 ATGLIILVAMMI 317


>gi|254249324|ref|ZP_04942644.1| Inner-membrane translocator [Burkholderia cenocepacia PC184]
 gi|124875825|gb|EAY65815.1| Inner-membrane translocator [Burkholderia cenocepacia PC184]
          Length = 177

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 15/166 (9%)

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
              Y  +  +V+     ++A   +   RT      R +  +     ++          AF
Sbjct: 15  GGSYPAYRMFVIGVALAVTAGCWVLFTRTRFGTKLRAVIQHPAMAEAVGINTRRLNRVAF 74

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
              +A   +AG   A      S      S       +++LGG+ S++     +A +  + 
Sbjct: 75  CGGAALASLAGVLVAPMVSVESH--LGVSYLAKAFFVIVLGGIGSVAGSILGSAFVGTIE 132

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            L          S              +++I   ++I  R   LL 
Sbjct: 133 TLLSYRVDPSLASA-------------IVLIVSIVLIRFRPQGLLP 165


>gi|37527031|ref|NP_930375.1| ABC transporter permease protein (IM) LsrC [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|81418886|sp|Q7N2D8|LSRC_PHOLL RecName: Full=Autoinducer 2 import system permease protein lsrC;
           Short=AI-2 import system permease protein lsrC
 gi|36786464|emb|CAE15518.1| ABC transporter permease protein (IM) LsrC [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 333

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 96/334 (28%), Gaps = 43/334 (12%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            N  +    +  +    LL +      S + +  +     I ++ A G ++V+     + 
Sbjct: 6   QNNREITALIAILCLFGLLSVIDHQYFSLQTVTLVFSSAQILILLAMGATLVM-LTRNID 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA-- 125
           ++      + A    +     G S+ +   ++ ++    G   G      +   +     
Sbjct: 65  VSVGSIAGLCAVIMGM-SLNAGFSLSVSCLLTLLLGMCAGFFNGALVTWLKIPAIVTTLG 123

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL +      +L   K I      +       +L  +                       
Sbjct: 124 TLGLYRGLMLLLTDGKWIEGLPDELKRLSAPLWLNISPIGW------------------- 164

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
               +  L  ++   L +T    ++    DN +    L       ++ AF+V+     +A
Sbjct: 165 ---LLMILILAMAWILAKTPFGRSFYATGDNLQGARQLGVRTDSIQIIAFSVNGVMAALA 221

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCG 300
           G  FA+    I        E   + + V     +LGG  ++         L  +      
Sbjct: 222 GIVFASQIGFIPNQTGSGLEMRAIAACVLGGISLLGGTGTVIGAILGAFFLTQINSGLVL 281

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +    +             +  +    L  V++ 
Sbjct: 282 LKLPAW------------WNDFIAGFVLLAVLIF 303


>gi|99081353|ref|YP_613507.1| inner-membrane translocator [Ruegeria sp. TM1040]
 gi|99037633|gb|ABF64245.1| inner-membrane translocator [Ruegeria sp. TM1040]
          Length = 343

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/342 (12%), Positives = 98/342 (28%), Gaps = 48/342 (14%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY------------------- 79
           I +   +   Y + A GL+++ G+LG+++      + IGA+                   
Sbjct: 8   ILNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFCAVTLSRILTLSHTIIDET 67

Query: 80  ------------------SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
                              + +      +   + + V   I     + + +     +  Y
Sbjct: 68  KTDFLGNPLKVEVPYVHDIFGVEMGNAIIDWSVPLSVLFAIPIMIAVGVIMERGLIKHFY 127

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                  +   F   ++  + I        +                   F  + +IY  
Sbjct: 128 KRPHADQILVTFGLAIVLQEVIKYFYGANPIPTPAPEAFKGSLDFGAALGFDPNLIIYPY 187

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
           +          +   +  +L+ T      R    +++    L   I       F V++A 
Sbjct: 188 WRIIYFCFAAVIIGGVFAFLQFTTFGMVVRAGMADRETVGLLGINIDRRFTIIFGVAAAV 247

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AG  +             F     V+ +V    M SL     A  +L  +       
Sbjct: 248 AGLAGVMYTPINSPNYHMGMDFLVLSFVVVVVGG--MGSLPGAVLAGFLLGVLES----- 300

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
               F S+ +        +  ++ +   +++L R   L+  +
Sbjct: 301 ----FASMREVIDIIPGINQVIIYLVAIIILLTRPRGLMGRK 338


>gi|325529172|gb|EGD06148.1| leucine/isoleucine/valine transporter permease subunit
           [Burkholderia sp. TJI49]
          Length = 206

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/109 (38%), Positives = 62/109 (56%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +++ LL    +      +    +    LIYV+   GL+IVVG  GLL L  V  YA+G Y
Sbjct: 98  IIWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGGY 157

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +Y +L   +GL+ W  +P++A+ S   G ++G P L+ RGDYLAI TL 
Sbjct: 158 TYAMLNQYFGLTFWECLPLAAIASATFGFLLGFPVLRLRGDYLAIVTLG 206


>gi|304406951|ref|ZP_07388605.1| inner-membrane translocator [Paenibacillus curdlanolyticus YK9]
 gi|304343938|gb|EFM09778.1| inner-membrane translocator [Paenibacillus curdlanolyticus YK9]
          Length = 328

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 105/316 (33%), Gaps = 13/316 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             L+  +  L   L+     +   +  +   I I    A G++  +   G   L+     
Sbjct: 14  ALLVIGIVILFFSLWDEHFFTYANLSDILRSISIVTFVAIGVTFSLTVDG-FDLSVGSTV 72

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           ++   +   +   Y + + ++I V  +I    G++  L  ++ R   L +ATL +  I  
Sbjct: 73  SLTTVTAATIMVWYEMPLIVVIVVPILIGALIGLLNALLIVRVRIPDL-LATLAVMYIIS 131

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +   +    +    + + D     G    S +   +     +   + +  + +      
Sbjct: 132 GVQRTYTKGYSIYNNMAMEDGTTAPGKFTDSFLWIGQGKLLGIPVPVILMVIAV------ 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + L+ + T      +    N++A       +   + +A+ +S  F  + G  FAA   
Sbjct: 186 VLVHLFFKYTRYGRQMQMTGGNEEAARLSGVRVKRIRTAAYVISGVFAAIGGILFAARTG 245

Query: 255 RISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
               D         V S+     V+  G  ++        ++  ++     M+  Y+ + 
Sbjct: 246 TGQIDAGAPMLMEAVASVFVGYSVLGAGRPNVIGTFFGAVLIGVLLNGMTMMHIPYYTND 305

Query: 310 LKFDCSFNMRHTTLMV 325
           +       +      +
Sbjct: 306 IIKGAVLILALAVTFI 321


>gi|297622940|ref|YP_003704374.1| inner-membrane translocator [Truepera radiovictrix DSM 17093]
 gi|297164120|gb|ADI13831.1| inner-membrane translocator [Truepera radiovictrix DSM 17093]
          Length = 331

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/322 (11%), Positives = 82/322 (25%), Gaps = 16/322 (4%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R +       +  V   +   L      S   + ++  +     + A G + V+   G L
Sbjct: 13  RFDLRALGPLIGLVALFVAGALINPVFLSPTNLFNVLTRSAFIGIIAVGATFVI-ISGGL 71

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A  A   +I  +    +    +    +  G   ++     L           
Sbjct: 72  DLSVGSMAAFIAGVMIIAMNSAVATFGAGVVTVLLGIGVSLLLGLFAGLLNGLIITRGKI 131

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
                    + I    +T    G          GT          +   +    + + Y 
Sbjct: 132 AAFIVTLGTLGIFRSLVTYLADG----------GTLSLDFGVRGVYGPVYTGSLLGVPYP 181

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L    ++    + L RT        I  N++        +   +   + +    + +A 
Sbjct: 182 VLVFAAVAVLGSVLLHRTRFGRYCYAIGSNERVARYSAIDVDRVQTLTYVLQGLCVSVAT 241

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILG-----GMTSLSKIAKATAILIGVVELCCGM 301
             +       S       E   + +++I G     G   +        +L  +  +    
Sbjct: 242 IIYVPRLGSASASTGVLWELEAIAAVIIGGTALRGGSGHVWGTVVGAVMLSTIGNVLNLT 301

Query: 302 NFYYFNSLLKFDCSFNMRHTTL 323
            F              +    L
Sbjct: 302 GFISEYLNGAVQGLIIIAAVLL 323


>gi|239833711|ref|ZP_04682039.1| monosaccharide-transporting ATPase [Ochrobactrum intermedium LMG
           3301]
 gi|239821774|gb|EEQ93343.1| monosaccharide-transporting ATPase [Ochrobactrum intermedium LMG
           3301]
          Length = 333

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 87/302 (28%), Gaps = 17/302 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            +      S   + ++  +     + A G + V+ S G L L+     A  A   ++  +
Sbjct: 37  AIANPNFISIDNLLNVATRSAFIAIIALGATYVI-SSGGLDLSVGAMVAFVASIMILFMN 95

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              ++  +++ ++A++                     I   I +     I          
Sbjct: 96  SGMIADPVMMLIAAVMLALIVGAACGLLNGLITTVGGIEPFIATLGTMGIYRGLTTW--- 152

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                          T+R+      +  ++    + +   ++ +   +A     L RT  
Sbjct: 153 --------LSQGGAITLRNPDIQAIYRPAYFGSVLGVPVPVIVIFVTAALAAFVLYRTRY 204

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                 +  N+        ++   +  AF +    + +A   +       S       E 
Sbjct: 205 GRHVIAVGSNEDVARYSGISVKKVRTIAFVIQGLCVAVAVLLYVPRLGSTSATTGLMWEL 264

Query: 267 IIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             + ++V+      GG+  +        IL  +  +    +F     L     +  +   
Sbjct: 265 QAITAVVVGGTALRGGVGRVWGTICGAFILEIIGNIMLLSSFVSEYLLGAIQGAIIIIAM 324

Query: 322 TL 323
            +
Sbjct: 325 LV 326


>gi|218659906|ref|ZP_03515836.1| inner-membrane translocator [Rhizobium etli IE4771]
          Length = 153

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 17/167 (10%)

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y +LG   +   II     +   +    IR+N+    +L       KL AF +S+A  G+
Sbjct: 1   YTVLGGTVIGLVIIWRAVNSPFGHTLSAIRENETRVTALGLKPDRYKLIAFTLSAALSGL 60

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG+  A +    S     +  +  VI + +LGGM +L      + +++G+          
Sbjct: 61  AGSMKAIAFQLASLVDVTWHMSGEVILMTLLGGMGTLIGPIVGSTLVVGLEHFLSTSGLP 120

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
                           T ++ +   + ++M    +        FLER
Sbjct: 121 I---------------TFIIGLFFVICVMMFRRGVFG--ELKLFLER 150


>gi|307303480|ref|ZP_07583234.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
 gi|306902871|gb|EFN33463.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
          Length = 334

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 98/313 (31%), Gaps = 20/313 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               +   L   +F     S + ++    Q+   V+ A G+++V+   G + L+     A
Sbjct: 29  VAAFLALILFNVVFTPNFLSLQTLNVNLTQVATIVIVAIGMTLVIA-TGGIDLSVGSLMA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IG     +    +  +++ +  +   ++ A  + +    L    + L +    +  I   
Sbjct: 88  IGG---ALAPMIFMGTLFPVSSMPVAVALAFVLPVVATGLLGLFNGLLVTRFAIQPIIAT 144

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +++                    +      + R   F    +     +   ++ M  ++A
Sbjct: 145 LVLFIAGRGIA----------QVMTNGNLQVFRNEGFQFIALGRVAGIPAQVILMIAIAA 194

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                +R T +      +  N+KA       +   KL  + +S A  G+AG    A    
Sbjct: 195 IAWAAIRYTVLGRQVIAVGGNEKAARLTGIPVHRVKLLVYMISGALAGVAGLIVVARNSA 254

Query: 256 ISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              ++      +  I+ V +      GG  ++        ++  V             +L
Sbjct: 255 SDANLVGLGMELDAIAAVAVGGTLLTGGRANIVGTVIGALVIQLVRYTLLANGVPDAAAL 314

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 315 IVKAALILLAVFI 327


>gi|311281367|ref|YP_003943598.1| inner-membrane translocator [Enterobacter cloacae SCF1]
 gi|308750562|gb|ADO50314.1| inner-membrane translocator [Enterobacter cloacae SCF1]
          Length = 336

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 98/313 (31%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +  +      ++  + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 35  ILPILILIVAVFGVIAPNFFTESNLLNITRQASINIVLAAGMTFII-LTGGIDLSVGSIL 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A     +       + LL   +A++ G    +     + F G    I TL      +
Sbjct: 94  GTTA--VAAMVVSLIPELSLLSIPAALMLGLLLGLFNGALVAFAGLPPFIVTLGTYTALR 151

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                          +     F      Y   + ++++    + 
Sbjct: 152 GAAYLLAD-------------------GTTVINSSISFEWIGNNYLGPVPWLVVIALAVV 192

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     LRRT +      +  N +A       + F  L  + +S    G+ G   A+   
Sbjct: 193 AICWFILRRTTLGVHIYAVGGNMQAARLTGIKVWFVLLFVYGMSGLLSGLGGVMSASRLY 252

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 253 SANGNLGVGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 312

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 313 VIKGAVIIIAVLI 325


>gi|308067645|ref|YP_003869250.1| ribose/xylose/arabinose/galactoside ABC transporter permease
           [Paenibacillus polymyxa E681]
 gi|305856924|gb|ADM68712.1| Ribose/xylose/arabinose/galactoside ABC-type transport system,
           permease component [Paenibacillus polymyxa E681]
          Length = 329

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 93/297 (31%), Gaps = 28/297 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
              Y   +  + V+    + L+     S   + ++  Q  +  +    ++ V+ S G + 
Sbjct: 24  WRSYIVYIAFIVVLIYFSITLYSDGFLSVGNLLNIIRQTAMISIMGAAMTFVI-STGEID 82

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+ + +  +            + ++ +I    G+I+G+ +          + L
Sbjct: 83  LSVGSTAALASLTTALALENEW-----GLAIAIIIGLGTGLIIGIVNGLLVTKANIPSFL 137

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           +   +   +           +G+ +        T + S   F           I + + L
Sbjct: 138 VTLGMMSIV-----------SGLAMWITGTSPVTIIDSTFNFVFGGGDIGPVPILLIWTL 186

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +        +    R+T           N+ A        +  KL  F  +     +AG 
Sbjct: 187 VIAVIAHILL----RKTKFGRQTLATGGNENAARFSGINTLKIKLYVFVGTGVMAALAGM 242

Query: 248 FFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELC 298
            +A              + + VI+ VIL      GG+ ++      + ++  +    
Sbjct: 243 LYAGRLH-AGRYTLGTGDELSVIAAVILGGTSLFGGVGTVIGTIIGSLMIGTINNGL 298


>gi|239624896|ref|ZP_04667927.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239521282|gb|EEQ61148.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47FAA]
          Length = 320

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/316 (10%), Positives = 87/316 (27%), Gaps = 26/316 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+ +V  + + +      +   I ++  QI +Y + A G++  +   G + L      
Sbjct: 21  LILVIIVVSVFMSIRSENFMTPTNILNVLRQISVYGILACGMAFAM-MTGGIDLTVGSTA 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +             + +   I +  ++    G++ G+   K       +   +   +  
Sbjct: 80  GVCGALVTKFVVEGNMPLVPAILIGLLVGALLGLLSGIFIAKTGIPPFIMTLGMQITLRG 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +  +    G                              +     +   +  M    
Sbjct: 140 ACYLICEGKPIG--------------------NIPDSMLQLGIGSLGGIPIPIFFMLGTF 179

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + + L RT+   +   +  N +A            + A+ +S     +AG   +A   
Sbjct: 180 VVVGIILSRTSFGRSVYAVGGNYQAAHHSGINAQRVIMYAYMISGICAALAGVILSARNA 239

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + +  +      GG  ++  I     ++  +      +    +  L
Sbjct: 240 SAQPTAGNAFETEAIAACAMGGVSFSGGKGAVVGIFFGALLMGIINNGMNLLYISSYWQL 299

Query: 310 LKFDCSFNMRHTTLMV 325
           +             + 
Sbjct: 300 VVKGIIIIAAVIYSIF 315


>gi|218296529|ref|ZP_03497257.1| branched-chain amino acid ABC transporter, permease protein
           [Thermus aquaticus Y51MC23]
 gi|218243071|gb|EED09603.1| branched-chain amino acid ABC transporter, permease protein
           [Thermus aquaticus Y51MC23]
          Length = 168

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 1/100 (1%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            +    +   IL+Y +   GL+I  G  GL+++       +GAY+  +L    GL  WLL
Sbjct: 46  SRTQVFILDLILVYSVAVLGLNITTGYAGLINIGQAAFMGVGAYTAALLA-PLGLPFWLL 104

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IP+  +++   G ++G+PSL+ +  YLA+ATL    IF+ 
Sbjct: 105 IPIGGLVAAFFGFLVGIPSLRVKHLYLALATLAFQIIFEW 144


>gi|150388296|ref|YP_001318345.1| monosaccharide-transporting ATPase [Alkaliphilus metalliredigens
           QYMF]
 gi|149948158|gb|ABR46686.1| Monosaccharide-transporting ATPase [Alkaliphilus metalliredigens
           QYMF]
          Length = 325

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 94/313 (30%), Gaps = 25/313 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               ++  ++         +   + ++ +Q  I  + A G+++V+   G + L+     A
Sbjct: 25  VFSFIILVMIAIAVNNRFLTYNNLSTIVMQSSIKGIIALGMTLVI-ISGEIDLSVGSTCA 83

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             A   V++ +       +L+   A  +    +   L +                     
Sbjct: 84  FVAGLGVVVLNSTENIFIMLVFCMAFGTLLGTVNGLLITKG------------------K 125

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I      +    A   +  +L   G    S   +  F        + +  + +   F+S 
Sbjct: 126 IASFIVTLATMSAYRSIVVQLGQGGPFNVSSEMYPSFRMIASGKILGVPNLAIIFIFISV 185

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           ++   +R T        +  N  A       +   K+ +F+++    G++    +A    
Sbjct: 186 AMAFLMRETKFGKYVYAVGSNSNAAKLTGVNVERIKMLSFSITGLLTGISAFLLSARLTS 245

Query: 256 ISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           I+      +  +  I+ V +      GG   +        +L  +  +        F + 
Sbjct: 246 ITAANVAMAFELDAIAAVAIGGTAMSGGRGRIFGTFLGIIMLQMIEGILIAAKIPPFLNG 305

Query: 310 LKFDCSFNMRHTT 322
           L       +    
Sbjct: 306 LVKGVIIVVAVLL 318


>gi|300717394|ref|YP_003742197.1| sugar ABC transporter permease [Erwinia billingiae Eb661]
 gi|299063230|emb|CAX60350.1| Sugar ABC transporter, permease protein [Erwinia billingiae Eb661]
          Length = 338

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/322 (13%), Positives = 98/322 (30%), Gaps = 26/322 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + ++ V   L+   F    + Q ++ +      + +Q+ I  + A G++ V+ + G + L
Sbjct: 26  IFIVMVGIALIFEAFGWYVRDQSFLMNPNRLVLIVLQVAIIGIIAVGVTQVIITTG-IDL 84

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+ A     L                 ++     ++ LP++      + +  L 
Sbjct: 85  SSGSVIALTAVVAASLAQTSDS-----------LTPMYPSLVNLPAVVPIVAGVGVGFLA 133

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                  I     P      G+ V+ R      T  + I F     + +        + L
Sbjct: 134 GVINGVLITRTGIPPFIATLGMMVSARGLAQYYTQGNPISFLSDGFTSIGQGAMPVIIFL 193

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +        + L+ T        I  N  +       +    +  + ++    G+AG  
Sbjct: 194 VVA---VIFHIALKHTRYGKYVYAIGGNMTSAKVSGINVNKYLIIVYTIAGGLSGLAGVV 250

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            AA        M    E   + + VI     +GG+  ++       IL  +      +  
Sbjct: 251 LAARVSSGQSSMGMSYELDAIAAAVIGGSSLMGGVGRITGTLIGAVILGLIKSGFTFVGV 310

Query: 304 YYFNSLLKFDCSFNMRHTTLMV 325
             +   +          +  M 
Sbjct: 311 DAYVQDIIKGIIIVAAVSIDMY 332


>gi|261342979|ref|ZP_05970837.1| hypothetical protein ENTCAN_09581 [Enterobacter cancerogenus ATCC
           35316]
 gi|288314730|gb|EFC53668.1| ribose ABC transporter, permease protein [Enterobacter cancerogenus
           ATCC 35316]
          Length = 334

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/320 (12%), Positives = 92/320 (28%), Gaps = 23/320 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +   + +L  + V+  + +   + +  +   +  +     I ++ A G  +V+     + 
Sbjct: 6   MKHREALLGAVIVLMIVAIGSRVPSFLAPGNLVEIFNDTSILIVLALGQMMVL-LTKGID 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+      ++   Y       + + A   G    ++    +   G    + TL
Sbjct: 65  LSMAANLALTGMIVALINFHYPDVPVWGLLMLASALGLVMGMINGLLVWKLGIPAIVVTL 124

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I++ I+                  L   G  V +      F        + +  + 
Sbjct: 125 GTMSIYRGIIF-----------------LLSGGGWVNANQMSADFLGLPRAAVLGLPVLS 167

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                    +  +LR +    A  T   N  A +     +   +  +F +S    G  G 
Sbjct: 168 WCAVAALLLVGYFLRYSRTGRALYTAGGNATAAYYTGINVGKMQFVSFCLSGLLAGFCGY 227

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
            + +       D+    E  +V + VI     +GG   +         L  +      + 
Sbjct: 228 LWISRFAVAYVDVANGFELQVVAACVIGGISTMGGTGRVLGCLFGALFLGVINNALPVIG 287

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F  +        +    
Sbjct: 288 VSPFWQMAISGTVIVIAVLL 307


>gi|65318096|ref|ZP_00391055.1| COG1172: Ribose/xylose/arabinose/galactoside ABC-type transport
           systems, permease components [Bacillus anthracis str.
           A2012]
          Length = 311

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 94/312 (30%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLALIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +     +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMAV--GLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N++A       +   K+  + +       AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEEAAALSGINVTKIKVMIYGLXGILAAFAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|149913163|ref|ZP_01901697.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. AzwK-3b]
 gi|149813569|gb|EDM73395.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. AzwK-3b]
          Length = 328

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/325 (12%), Positives = 102/325 (31%), Gaps = 33/325 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---------------- 82
           + +  +  ++Y + A G  ++  + G+ +    +     A + V                
Sbjct: 12  LLNGLMAGVLYALVALGFVLIYKASGIFNFAQGVMALFAALTLVGIMEGQVPFAHLINSI 71

Query: 83  ----ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               I    + +  +L I ++ ++  A    +     K   +   I   + +      L 
Sbjct: 72  FGTEIHHFGWHVPAFLAILLTMVVMVALAWAVNKIVFKHLVNQEPIILFMATIGLAYFLE 131

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            +  I  G     +   L      V     +  F   F I  + ++   +    +   I+
Sbjct: 132 GFGDIMWGSDIKKLDVGLPQGINGVIDEATYQVFGYGFFIDNLDLFATAIAAALVFTLIV 191

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
            + + T    A R + D+ +A  S+  ++ F  +  ++++     +AG  +         
Sbjct: 192 -FAQYTKQGRAMRAVADDHQAALSVGISLNFIWVMVWSLAGFVALVAGIMWGTKSGVQFS 250

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                   +  + +++LGG TS+        ++    +L             +   +   
Sbjct: 251 LS---LIALKALPVLMLGGFTSIPGAIVGGLLIGMGEKLFEFAIGSAIGGATENWFA--- 304

Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343
                  +   L ++ R   L   +
Sbjct: 305 ------YVLALLFLVFRPQGLFGEK 323


>gi|269929397|ref|YP_003321718.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
 gi|269788754|gb|ACZ40896.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
          Length = 325

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/293 (11%), Positives = 90/293 (30%), Gaps = 28/293 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +     +  ++L L   A  S + + ++  Q     + A   ++V+   G   L+    +
Sbjct: 28  VVAAFALLFIILSLASPAFLSTRNLLNILDQSAPVAIIACAGTLVI-IAGGFDLSAGAVF 86

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       + +       + +  + +++   G+  GL       +              
Sbjct: 87  ALSGVIAAKVANAVD--PVVGMLAALVVATLLGVFNGLLVAGLHINPFVATF-------- 136

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                        + + +      +       +    +          + Y +  +   +
Sbjct: 137 ------------SSAMMIRGLAVVITGGFLVTVTDPAYTVIGRNSLFSVKYSVYILAAFA 184

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     L RT +      +  N +A       + + ++  FA+S    G+AG   ++   
Sbjct: 185 AVCWFLLVRTKLGRHIYAVGGNPEAARLSGIRVGWIRVLTFAISGFAAGLAGLIASSRVA 244

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
               D     E   + ++V     I+GG  ++ +      +L  +      ++
Sbjct: 245 TGQADAGTLIEFTAIAAVVIGGTSIMGGEGTIWRTVVGVLLLALIGNGFNMLS 297


>gi|167838570|ref|ZP_02465429.1| ABC transporter permease protein [Burkholderia thailandensis
           MSMB43]
          Length = 340

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 92/311 (29%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 41  VLVLLCVGFGFMTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 99

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S      WL IP +  +    G++ G      R     +    ++ +     
Sbjct: 100 A-VASLLASNIPGWGWLGIPAALAVGLVFGVVNGGLISFLRLPPFIVTLGALTAVRGIAR 158

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    +G           F        + + ++++    + A  
Sbjct: 159 L--------------------MGNDTTIFNPQLPFAFIGNGSILGVPWLVVIALAVVALS 198

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   +L  +A S    G+     AA     +
Sbjct: 199 WFILRRTVLGMRIYSVGGNPEAARLSGINVRGIELFVYATSGLLAGLGALMSAARLYAAN 258

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 259 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLSNGLVLLGVSDIWQYII 318

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 319 KGLVIIGAVAL 329


>gi|160936084|ref|ZP_02083457.1| hypothetical protein CLOBOL_00980 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440894|gb|EDP18618.1| hypothetical protein CLOBOL_00980 [Clostridium bolteae ATCC
           BAA-613]
          Length = 327

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 91/294 (30%), Gaps = 29/294 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ +V    + +F     +   I ++  Q+ I  + A G++ V+   G + L+     
Sbjct: 25  IIIIFIVLFAAMSIFAPNFLTGSNIANVLRQVSINGICAIGMTFVI-LTGGIDLSVGAII 83

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +      ++       I   +   A+ +        + S       +A    + S    
Sbjct: 84  GVSGVLTAMMMINNVNPIIASLISLALCTLIGFATGLVISHIGIPPMVATMGTMTSLRGV 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             LI       G                        R+      Y   +   ++ +    
Sbjct: 144 AYLITGGTPVFGFD---------------------SRYAVIGQGYVGAVPIPVIILVLSF 182

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A+ I +L +T  S     +  N++       ++   K   +AVS     +AG       +
Sbjct: 183 AAGIFFLSKTRHSRYIYGVGGNEEVARLSGISVHRIKAFVYAVSGFCSALAGLVMLGRLN 242

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMN 302
                    S  + VI+ V+L      GG+  +S +     I+  +      M 
Sbjct: 243 S-GQPRAGESYEMDVITAVVLGGVSLTGGVGKISHVVFGVLIIGVLTNGMTMMA 295


>gi|152969168|ref|YP_001334277.1| putative inner-membrane translocator [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150954017|gb|ABR76047.1| putative bacterial inner-membrane translocator [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
          Length = 362

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 89/299 (29%), Gaps = 9/299 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +      + +    S   +  M   I I    A G++ V+ + G + L+      
Sbjct: 32  FIALFLIVGFFTMTVPGFLSAGSMVIMIKHIAINAFLALGITFVIITAG-IDLSIGATLG 90

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L ++    I L +   A+      ++  +  +      +    +    +   
Sbjct: 91  LCGMIAGWLITKG---IVLPMFGIAIFPSVWVIVPLVLLIGALIGAVNGWIITRYNVAPF 147

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I           A +  +D   F G      +    F          + + +  M  L+ 
Sbjct: 148 ICTLGTMYVLRGAAMLTSDGQTFPGLAGNPQLGNTGFDEIGAGALFGIPWAIWLMILLAL 207

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I    RR         I DN++A       +   K+  + +S     +AG   +A    
Sbjct: 208 IIAYIARRLPFGRHVYAIGDNERAAELSGVKVKQIKVLVYTLSGFCAAIAGIVVSAQLLA 267

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             P      E   + ++V+      GG  ++        ++  + +    M    F  +
Sbjct: 268 SHPANGTAFEMNAIAAVVLGGTSLAGGRGTILGTLIGAFVIGFLADGLVMMGVSEFWQM 326


>gi|23501432|ref|NP_697559.1| ribose ABC transporter permease [Brucella suis 1330]
 gi|148560380|ref|YP_001258544.1| ribose ABC transporter permease [Brucella ovis ATCC 25840]
 gi|161618516|ref|YP_001592403.1| monosaccharide-transporting ATPase [Brucella canis ATCC 23365]
 gi|163842821|ref|YP_001627225.1| monosaccharide-transporting ATPase [Brucella suis ATCC 23445]
 gi|254693313|ref|ZP_05155141.1| monosaccharide-transporting ATPase [Brucella abortus bv. 3 str.
           Tulya]
 gi|254701341|ref|ZP_05163169.1| monosaccharide-transporting ATPase [Brucella suis bv. 5 str. 513]
 gi|254703885|ref|ZP_05165713.1| monosaccharide-transporting ATPase [Brucella suis bv. 3 str. 686]
 gi|254709679|ref|ZP_05171490.1| monosaccharide-transporting ATPase [Brucella pinnipedialis B2/94]
 gi|256031170|ref|ZP_05444784.1| monosaccharide-transporting ATPase [Brucella pinnipedialis
           M292/94/1]
 gi|256060675|ref|ZP_05450840.1| monosaccharide-transporting ATPase [Brucella neotomae 5K33]
 gi|256159260|ref|ZP_05457063.1| monosaccharide-transporting ATPase [Brucella ceti M490/95/1]
 gi|256254577|ref|ZP_05460113.1| monosaccharide-transporting ATPase [Brucella ceti B1/94]
 gi|256368985|ref|YP_003106491.1| ribose ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|260566867|ref|ZP_05837337.1| tetracycline resistance protein TetB [Brucella suis bv. 4 str. 40]
 gi|261213558|ref|ZP_05927839.1| monosaccharide-transporting ATPase [Brucella abortus bv. 3 str.
           Tulya]
 gi|261221751|ref|ZP_05936032.1| monosaccharide-transporting ATPase [Brucella ceti B1/94]
 gi|261317209|ref|ZP_05956406.1| monosaccharide-transporting ATPase [Brucella pinnipedialis B2/94]
 gi|261324667|ref|ZP_05963864.1| monosaccharide-transporting ATPase [Brucella neotomae 5K33]
 gi|261751876|ref|ZP_05995585.1| monosaccharide-transporting ATPase [Brucella suis bv. 5 str. 513]
 gi|261754535|ref|ZP_05998244.1| monosaccharide-transporting ATPase [Brucella suis bv. 3 str. 686]
 gi|265988247|ref|ZP_06100804.1| monosaccharide-transporting ATPase [Brucella pinnipedialis
           M292/94/1]
 gi|265997715|ref|ZP_06110272.1| monosaccharide-transporting ATPase [Brucella ceti M490/95/1]
 gi|306845158|ref|ZP_07477735.1| ribose ABC transporter permease [Brucella sp. BO1]
 gi|23347332|gb|AAN29474.1| ribose ABC transporter, permease protein [Brucella suis 1330]
 gi|148371637|gb|ABQ61616.1| ribose ABC transporter, permease protein [Brucella ovis ATCC 25840]
 gi|161335327|gb|ABX61632.1| Monosaccharide-transporting ATPase [Brucella canis ATCC 23365]
 gi|163673544|gb|ABY37655.1| Monosaccharide-transporting ATPase [Brucella suis ATCC 23445]
 gi|255999143|gb|ACU47542.1| ribose ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|260156385|gb|EEW91465.1| tetracycline resistance protein TetB [Brucella suis bv. 4 str. 40]
 gi|260915165|gb|EEX82026.1| monosaccharide-transporting ATPase [Brucella abortus bv. 3 str.
           Tulya]
 gi|260920335|gb|EEX86988.1| monosaccharide-transporting ATPase [Brucella ceti B1/94]
 gi|261296432|gb|EEX99928.1| monosaccharide-transporting ATPase [Brucella pinnipedialis B2/94]
 gi|261300647|gb|EEY04144.1| monosaccharide-transporting ATPase [Brucella neotomae 5K33]
 gi|261741629|gb|EEY29555.1| monosaccharide-transporting ATPase [Brucella suis bv. 5 str. 513]
 gi|261744288|gb|EEY32214.1| monosaccharide-transporting ATPase [Brucella suis bv. 3 str. 686]
 gi|262552183|gb|EEZ08173.1| monosaccharide-transporting ATPase [Brucella ceti M490/95/1]
 gi|264660444|gb|EEZ30705.1| monosaccharide-transporting ATPase [Brucella pinnipedialis
           M292/94/1]
 gi|306274463|gb|EFM56267.1| ribose ABC transporter permease [Brucella sp. BO1]
          Length = 333

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 87/301 (28%), Gaps = 17/301 (5%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      S   + ++  +     + A G + V+ S G L L+     A  A   ++  + 
Sbjct: 38  IANPNFISIDNLLNVATRSAFIAIIALGATYVI-SSGGLDLSVGAMVAFVASIMILFMNS 96

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             ++  +L+ ++A++                     I   I +     I           
Sbjct: 97  GMIADPVLMLIAAVMLALVVGAACGLLNGIITTVGGIEPFIATLGTMGIYRGLTTW---- 152

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                         T+R+      +  ++    + +   ++ +   +A     L RT   
Sbjct: 153 -------LSQGGAITLRNPEIQSLYRPAYFGSVLGVPVPVIVIFVTAALAAFVLYRTRYG 205

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N+        ++   +  AF +    + +A   +       S       E  
Sbjct: 206 RHIIAVGSNEDVARYSGISVKKVRTIAFVIQGLCVAVAVLLYVPRLGSTSATTGLMWELQ 265

Query: 268 IVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V+      GG+  +        IL  +  +    +F     L     +  +    
Sbjct: 266 AITAVVVGGTALRGGVGRIWGTICGAFILEIIGNIMLLSSFVSEYLLGAIQGAIIIIAML 325

Query: 323 L 323
           +
Sbjct: 326 V 326


>gi|94971927|ref|YP_593967.1| inner-membrane translocator [Deinococcus geothermalis DSM 11300]
 gi|94553978|gb|ABF43893.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Deinococcus geothermalis DSM 11300]
          Length = 341

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/326 (12%), Positives = 103/326 (31%), Gaps = 25/326 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L   +  L ++ +V   L         S + +  + + + +  +   G ++V+  +  + 
Sbjct: 22  LRAREASLTVILLVLIALTAALNPRFLSAQSLRDLALNVALVALVVVGETLVL-LMRHVD 80

Query: 68  LNCVIAYAIGAY-SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           L+      + A+ +  +  +   + IWL      +I    G + GL     +   L    
Sbjct: 81  LSVSSILGLTAFLAGALFVAHPEMPIWLAFLAGLVIGALLGAVNGLLVAYGKVPALVATL 140

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
             +                        D     G  + +      F +      + +  +
Sbjct: 141 GTLYV------------------FRGMDYAIVHGGQITAADLPATFSAFASRSFLGVPSL 182

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +  +     ++LR       +  +  N +A       +    L+ F +S A  G+AG
Sbjct: 183 MLLVLAVMVGFGVYLRSYRSGREYYAVGSNTEAARLAGINVDRRVLTGFILSGAIAGLAG 242

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
             + A    +        E  ++ + V+      GG+ +++       +L  +      +
Sbjct: 243 VLYLARFGTVDASAGSGLELQVIAAAVVGGVAITGGVGTIAGAGVGALLLGVIGSALVAL 302

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIA 327
               F           +  +  +V+A
Sbjct: 303 RAPAFWQQAIQGALLLLAISVDIVLA 328


>gi|239826365|ref|YP_002948989.1| Monosaccharide-transporting ATPase [Geobacillus sp. WCH70]
 gi|239806658|gb|ACS23723.1| Monosaccharide-transporting ATPase [Geobacillus sp. WCH70]
          Length = 336

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 93/312 (29%), Gaps = 13/312 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  +V      + L    + +    +   I I  + A G++  +   G   L+     +
Sbjct: 27  LLAILVVIAYFGITLDRFFTYENFSDILRSISIVTLVAIGITFSLIVDG-FDLSVGSTVS 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   +       Y   I + +    ++  A G++  L  +K +   L +ATL        
Sbjct: 86  LATIASAAALVLYRQEILVTLLAPLLLGVAVGLLNSLLIVKLKLPDL-LATLATMYAING 144

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + +        G  + + +               F          + + +L M  +  
Sbjct: 145 VQLTYTK------GFSIYNDMPLPDGGTAPGKFIPSFLFIGQGEVFGIPFSVLLMLVVVI 198

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +  L+L  T     +    +N++A       +   +  A+ +S  F  + G   A+    
Sbjct: 199 AAHLFLTYTKPGRLFYMTGENREAARLSGIPVNRYRTYAYVISGFFAALGGIVLASRIGT 258

Query: 256 ISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                        V +      V   G  ++      + ++  ++     MN  Y+   +
Sbjct: 259 GQVSAGASFLMDGVAAAYIGFSVFGAGKPNVIGTLFGSILMGVLLNGLTMMNVPYYAQDI 318

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 319 IKGAILVGALAL 330


>gi|27228493|ref|NP_758543.1| putative ABC transporter subunit [Pseudomonas resinovorans]
 gi|219856915|ref|YP_002473946.1| putative ABC transporter subunit [Pseudomonas sp. CA10]
 gi|26106081|dbj|BAC41521.1| putative ABC transporter subunit [Pseudomonas resinovorans]
 gi|219688842|dbj|BAH09933.1| putative ABC transporter subunit [Pseudomonas putida]
          Length = 273

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 95/284 (33%), Gaps = 15/284 (5%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
           +G+++L     Y +GA+      +    S WL    + + S   G+++    ++   +  
Sbjct: 1   MGVINLAHGAFYMVGAFCAAY-TASLSGSFWLAGLAAVIGSALYGLLIETSIMRRLYNRD 59

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
            +  ++ +        +   +  G++   +    ++                  ++Y + 
Sbjct: 60  HLDQVLATLAVVFFTNELITVLFGRSPPAMPTPEWYSSFVE---------VLPGLMYPVS 110

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
               +     ++ ++ L +  T +    R   D+ +   +L   I       F       
Sbjct: 111 RLLFIAAGAVVAIAMWLLINHTRLGMLIRAGADDHEMVGALGVNIARLYTLVFVFGCVLC 170

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+AG   A                I    ++++GG+ S+        ++  V  L     
Sbjct: 171 GLAGFMAAPLLSV--EIGMGEKVLITTFVVIVVGGVGSVRGALAGALLIGMVDGLGRAYI 228

Query: 303 FYYFNSLLKFDCSFNMRHTTL---MVIALFLVILMRSHSLLRLR 343
               + LL  + S  +    +     I + +V+L+R   LL  R
Sbjct: 229 PQLLDQLLPAEVSGTLSGGLISASAYIVMAVVLLVRPRGLLPAR 272


>gi|154245806|ref|YP_001416764.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154159891|gb|ABS67107.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 297

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 97/306 (31%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  I   +Y +      ++  +  +++        IGA++   L + + +  +    +
Sbjct: 10  IINGLIIGTLYGVVGMCFVLIYKASQVVNFAQGEFLLIGAWTCWWLLTAWNIPFFWGFLI 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G+++ +  L+       I+ ++++               G            
Sbjct: 70  AVCFMMVFGIVVQMVVLRPLIGEPIISVIMVTIGMSIFFQALMKWMFGTFAQPFPPIFSV 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +  L     +  S  +                A    + + + +  A R    +Q+
Sbjct: 130 DKVNIMGLQVQTAYLMSTGVSLAI-----------MAGFAWFFKYSRLGLAMRATAFSQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  ++      ++ +S+A   +AG          S   +     I V   VILGG+
Sbjct: 179 VAQSLGISVRQVFALSWGISAAVSAVAGVVVGIVNGVSSALSY---FGIKVFPAVILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +  L    +  Y              +  +   AL ++++++ + 
Sbjct: 236 DSVFGAVVGGLIMGLLENLAQFFDSQYLKW--------GNLYEIVPFYALIIILMIKPYG 287

Query: 339 LLRLRT 344
           L   R 
Sbjct: 288 LFGTRD 293


>gi|22127641|ref|NP_671064.1| ABC transport system permease [Yersinia pestis KIM 10]
 gi|45443502|ref|NP_995041.1| putative ABC transporter permease [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108809864|ref|YP_653780.1| putative ABC transporter permease [Yersinia pestis Antiqua]
 gi|108810447|ref|YP_646214.1| ABC transporter permease protein [Yersinia pestis Nepal516]
 gi|145600475|ref|YP_001164551.1| ABC transporter permease protein [Yersinia pestis Pestoides F]
 gi|150260547|ref|ZP_01917275.1| putative ABC transporter permease protein [Yersinia pestis
           CA88-4125]
 gi|162420955|ref|YP_001605432.1| autoinducer AI-2 ABC transporter permease LsrC [Yersinia pestis
           Angola]
 gi|165927271|ref|ZP_02223103.1| autoinducer AI-2 ABC transporter, permease protein LsrC [Yersinia
           pestis biovar Orientalis str. F1991016]
 gi|165936439|ref|ZP_02225007.1| autoinducer AI-2 ABC transporter, permease protein LsrC [Yersinia
           pestis biovar Orientalis str. IP275]
 gi|166008921|ref|ZP_02229819.1| autoinducer AI-2 ABC transporter, permease protein LsrC [Yersinia
           pestis biovar Antiqua str. E1979001]
 gi|166212180|ref|ZP_02238215.1| autoinducer AI-2 ABC transporter, permease protein LsrC [Yersinia
           pestis biovar Antiqua str. B42003004]
 gi|167400572|ref|ZP_02306081.1| autoinducer AI-2 ABC transporter, permease protein LsrC [Yersinia
           pestis biovar Antiqua str. UG05-0454]
 gi|167419403|ref|ZP_02311156.1| autoinducer AI-2 ABC transporter, permease protein LsrC [Yersinia
           pestis biovar Orientalis str. MG05-1020]
 gi|167426105|ref|ZP_02317858.1| autoinducer AI-2 ABC transporter, permease protein LsrC [Yersinia
           pestis biovar Mediaevalis str. K1973002]
 gi|167467750|ref|ZP_02332454.1| autoinducer AI-2 ABC transporter, permease protein LsrC [Yersinia
           pestis FV-1]
 gi|218927613|ref|YP_002345488.1| putative ABC transporter permease [Yersinia pestis CO92]
 gi|229837012|ref|ZP_04457177.1| putative ABC transporter permease protein [Yersinia pestis
           Pestoides A]
 gi|229840289|ref|ZP_04460448.1| putative ABC transporter permease protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842367|ref|ZP_04462522.1| putative ABC transporter permease protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229900632|ref|ZP_04515756.1| putative ABC transporter permease protein [Yersinia pestis
           Nepal516]
 gi|270488007|ref|ZP_06205081.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
 gi|294502513|ref|YP_003566575.1| putative ABC transporter permease protein [Yersinia pestis Z176003]
 gi|122382513|sp|Q1C137|LSRC_YERPA RecName: Full=Autoinducer 2 import system permease protein lsrC;
           Short=AI-2 import system permease protein lsrC
 gi|122385330|sp|Q1CN16|LSRC_YERPN RecName: Full=Autoinducer 2 import system permease protein lsrC;
           Short=AI-2 import system permease protein lsrC
 gi|123776534|sp|Q7CG49|LSRC_YERPE RecName: Full=Autoinducer 2 import system permease protein lsrC;
           Short=AI-2 import system permease protein lsrC
 gi|209573022|sp|A9R075|LSRC_YERPG RecName: Full=Autoinducer 2 import system permease protein lsrC;
           Short=AI-2 import system permease protein lsrC
 gi|209573023|sp|A4TQL6|LSRC_YERPP RecName: Full=Autoinducer 2 import system permease protein lsrC;
           Short=AI-2 import system permease protein lsrC
 gi|21960754|gb|AAM87315.1|AE013980_7 putative ABC transport system permease protein [Yersinia pestis KIM
           10]
 gi|45438371|gb|AAS63918.1| putative ABC transporter permease protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108774095|gb|ABG16614.1| ABC transporter permease protein [Yersinia pestis Nepal516]
 gi|108781777|gb|ABG15835.1| putative ABC transporter permease protein [Yersinia pestis Antiqua]
 gi|115346224|emb|CAL19092.1| putative ABC transporter permease protein [Yersinia pestis CO92]
 gi|145212171|gb|ABP41578.1| ABC transporter permease protein [Yersinia pestis Pestoides F]
 gi|149289955|gb|EDM40032.1| putative ABC transporter permease protein [Yersinia pestis
           CA88-4125]
 gi|162353770|gb|ABX87718.1| autoinducer AI-2 ABC transporter, permease protein LsrC [Yersinia
           pestis Angola]
 gi|165915555|gb|EDR34164.1| autoinducer AI-2 ABC transporter, permease protein LsrC [Yersinia
           pestis biovar Orientalis str. IP275]
 gi|165920733|gb|EDR37981.1| autoinducer AI-2 ABC transporter, permease protein LsrC [Yersinia
           pestis biovar Orientalis str. F1991016]
 gi|165992260|gb|EDR44561.1| autoinducer AI-2 ABC transporter, permease protein LsrC [Yersinia
           pestis biovar Antiqua str. E1979001]
 gi|166206926|gb|EDR51406.1| autoinducer AI-2 ABC transporter, permease protein LsrC [Yersinia
           pestis biovar Antiqua str. B42003004]
 gi|166963397|gb|EDR59418.1| autoinducer AI-2 ABC transporter, permease protein LsrC [Yersinia
           pestis biovar Orientalis str. MG05-1020]
 gi|167049940|gb|EDR61348.1| autoinducer AI-2 ABC transporter, permease protein LsrC [Yersinia
           pestis biovar Antiqua str. UG05-0454]
 gi|167055028|gb|EDR64828.1| autoinducer AI-2 ABC transporter, permease protein LsrC [Yersinia
           pestis biovar Mediaevalis str. K1973002]
 gi|229681971|gb|EEO78063.1| putative ABC transporter permease protein [Yersinia pestis
           Nepal516]
 gi|229690677|gb|EEO82731.1| putative ABC transporter permease protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696655|gb|EEO86702.1| putative ABC transporter permease protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229705955|gb|EEO91964.1| putative ABC transporter permease protein [Yersinia pestis
           Pestoides A]
 gi|262360544|gb|ACY57265.1| putative ABC transporter permease protein [Yersinia pestis D106004]
 gi|262364490|gb|ACY61047.1| putative ABC transporter permease protein [Yersinia pestis D182038]
 gi|270336511|gb|EFA47288.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
 gi|294352972|gb|ADE63313.1| putative ABC transporter permease protein [Yersinia pestis Z176003]
 gi|320017031|gb|ADW00603.1| putative ABC transporter permease protein [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 351

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/316 (12%), Positives = 91/316 (28%), Gaps = 31/316 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            N  +    L  +    LL +      S +    +     I ++ A G ++V+     + 
Sbjct: 6   QNNREGTALLAILTLFALLGIIDRNYFSLQTFTMIFSSAQILILLAIGATLVM-LTRNID 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA-- 125
           ++      + A +  +     G  +      + ++    G   G+     R   +     
Sbjct: 65  VSVGSITGLCAVTVGM-ALNAGFGLAASCLFALLVGMVAGFFNGILVTWLRIPAIVATLG 123

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL +      +L   K I    A                         S        +  
Sbjct: 124 TLGLYRGLMLLLTGGKWIEGLPA----------------------DLKSLSTPILFSISP 161

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +      L  ++   L +TA   ++    DN +    L       ++ AF+++     +A
Sbjct: 162 IGWLTMLLILAMAWLLGKTAFGRSFYATGDNLQGARQLGVRTDSLRIFAFSMNGVMAALA 221

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCG 300
           G  FA+    I        E   + + V     +LGG  ++        +L  +  +   
Sbjct: 222 GIVFASQIGFIPNQTGNGLEMKAIAACVLGGISLLGGTGTIIGAILGAFLLTQIDSVLVL 281

Query: 301 MNFYYFNSLLKFDCSF 316
           +    + +        
Sbjct: 282 LRLPAWWNDFIAGLVL 297


>gi|288920917|ref|ZP_06415212.1| inner-membrane translocator [Frankia sp. EUN1f]
 gi|288347678|gb|EFC81960.1| inner-membrane translocator [Frankia sp. EUN1f]
          Length = 296

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 82/306 (26%), Gaps = 21/306 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G  I+  S  +L+        +GAY               ++  
Sbjct: 8   LFNGLAVGAVYALIALGFVIIFRSSEVLNFAHGAIVLLGAYVVA-RTHDSLGFAGAVVLG 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A  +    +I  L   + R       T+++  +   I                      
Sbjct: 67  VAAAAAMAALIELLLVRRLRNAPAISLTIMLLGVDILITTDLTRRMGS------------ 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +             V          L    + A +    R T+   A R   ++ +
Sbjct: 115 DILGLGHPWGADVVSLGGVAISANRLIAFLVAAVVIAGLFAAFRFTSWGVAMRAAAEDPE 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    L+++ ++ A    AG F   S      +    +       + +LGG+
Sbjct: 175 AAQLMGIRLGRVALTSWLLAGALAAAAGLFLTGS-PTPGLEPGIRTVAFAAFPVAVLGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S      A  ++     L  G                      ++       +L+R   
Sbjct: 234 DSPGGALMAGLLIGVSESLAAGYQDDLLFLGRGIGEVVPYIVMVVV-------LLIRPSG 286

Query: 339 LLRLRT 344
           L   + 
Sbjct: 287 LAGTKE 292


>gi|222081837|ref|YP_002541202.1| urea or short-chain amide ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221726516|gb|ACM29605.1| urea or short-chain amide ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 282

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 88/287 (30%), Gaps = 16/287 (5%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
             +        +   GL+I+ G + +++L       +GAY+ VI  +        ++ V+
Sbjct: 3   LDVINGTASLFLLCLGLAIIFGMMKIINLAHGEFIMLGAYATVISANAGVNIWIAMLVVA 62

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +  G  G+++    ++F    L  + L    +   I+     I                
Sbjct: 63  PLFVGLVGLLVERCLIRFLYGRLVDSMLATWGLSLLIIGIVTTIFGNTIQGVPTP----- 117

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                       F         +  ++L     + A +   +R T      R    N   
Sbjct: 118 ---------LGGFSIGAYRSSYYTLFLLAMAIIMMALVYAVMRYTRFGLIARATMQNPAM 168

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L        ++ FA  +A  G+AG   A         +   +        V+ GG  
Sbjct: 169 ANTLGVNPARVYMTTFAAGAAITGLAGGLLAPVSGV--TPVMGGAYVAKAFITVVGGGAA 226

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            LS    A  +   + ++   +    +  ++ F  +  +       I
Sbjct: 227 ILSGTLSAATLFGSINQIGAYLTTPVYGEVIVFTAAIVLIRLLPQGI 273


>gi|39996832|ref|NP_952783.1| branched-chain amino acid ABC transporter permease [Geobacter
           sulfurreducens PCA]
 gi|39983720|gb|AAR35110.1| branched-chain amino acid ABC transporter, permease protein
           [Geobacter sulfurreducens PCA]
 gi|298505847|gb|ADI84570.1| branched-chain amino acid ABC transporter, membrane protein
           [Geobacter sulfurreducens KN400]
          Length = 294

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 96/305 (31%), Gaps = 26/305 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ S      IY +   G +I+  + G+++        +G    +   +   L + + I
Sbjct: 9   QYLLSGLSTGAIYSLIGVGFAIIHNATGIINFAQGELVMLGGMFTLFFLTALNLPLLVAI 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++   +   G++    +++   +   I+ +I++     ++     I  GK         
Sbjct: 69  ILAIGATTLVGVVFERLAIRPMKNASPISLVIITIGGSILIRGIAMIVWGKDTHA----- 123

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + +                   ++      +     L+   T    A R    N
Sbjct: 124 ------IPTFSGNEPIHLGEATILPQHLWIFAVTIVVMICSKLYFNYTISGKAMRACAYN 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++A   +   +    L +FA+SSA   +AG   A      +         +      I+G
Sbjct: 178 RRAAGLVGIDVRRMVLFSFAISSAMGSLAGIIIAPLTM--TSYDVGIMLGLKGFCAAIIG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM+S         +L  +  L  G+    +   + F     +               +R 
Sbjct: 236 GMSSGLGTILGGILLGILESLGAGLFSSGYKDAIAFIILLLILF-------------VRP 282

Query: 337 HSLLR 341
             L R
Sbjct: 283 QGLFR 287


>gi|330816800|ref|YP_004360505.1| Inner-membrane translocator [Burkholderia gladioli BSR3]
 gi|327369193|gb|AEA60549.1| Inner-membrane translocator [Burkholderia gladioli BSR3]
          Length = 343

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 91/313 (29%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +    L  +      +     ++  QI   V+ + G++ V+   G + L+     
Sbjct: 43  LAGALIAMIALFSVLSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAG-IDLSVGSVL 101

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +   ++         +    +   GM+ G  ++ +R       +L + E  +
Sbjct: 102 ALAASFVSVAALKWHWGPLPSALLGIAAAAVTGMLTGAVTVGWRIPSFI-VSLGVLEGAR 160

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  +         G                      F      + + +    +    + 
Sbjct: 161 GLAYQLTNSRTAYIGDA--------------------FDFLSNPFALGISPAFVIAVLVM 200

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT        I  N++A           K+  FA+  A  G+A  F  +  +
Sbjct: 201 IVAQFVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKIIVFALMGALAGLAALFQISRLE 260

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +      +        
Sbjct: 261 AADPNAGVGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGANEPTKR 320

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 321 IITGAVIVVAVVL 333


>gi|322831712|ref|YP_004211739.1| inner-membrane translocator [Rahnella sp. Y9602]
 gi|321166913|gb|ADW72612.1| inner-membrane translocator [Rahnella sp. Y9602]
          Length = 323

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/321 (11%), Positives = 88/321 (27%), Gaps = 27/321 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           + N  D    +  V+  +          +   + ++  Q  I  + A G+++V+   G +
Sbjct: 18  KFNVRDAGTLIGLVIIVITFSFLSPVFFTVPNLLNILQQSSINGIIALGMTLVI-ISGGI 76

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+ A     L          ++    + +        L +      ++    
Sbjct: 77  DLSVGPTAALSAVLGATLMVSGVPVPLAIMATLGVGALCGVFSGMLVAYAGLQPFIVTLG 136

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
            +       ++        G                         F +        +   
Sbjct: 137 GLSLFRALALIFTNGNPIFG---------------------IPMEFRTVINSTIFGVPAP 175

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           ++ +  ++A +   + +T +      +  N++A       +   K++ F +S     +A 
Sbjct: 176 IVIVIAIAAILWTVMNKTPLGEYILAVGGNEEAARVAGVPVKRTKVTVFVISGVLASLAS 235

Query: 247 AFFAASRDRISPDMFKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
                      P M    E        +    ++GG  S+        IL  +      +
Sbjct: 236 LILIGRLGAAEPTMGNLWELDAIAAAAIGGASLMGGKGSVIGTLIGAVILGSLRNGLTLL 295

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
           N   F  LL       +    
Sbjct: 296 NIQAFYQLLATGLIIIIAMLI 316


>gi|239625944|ref|ZP_04668975.1| inner-membrane translocator [Clostridiales bacterium 1_7_47_FAA]
 gi|239520174|gb|EEQ60040.1| inner-membrane translocator [Clostridiales bacterium 1_7_47FAA]
          Length = 350

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 83/280 (29%), Gaps = 32/280 (11%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-------ILGSRYGL 90
           YI  +  +    V+ A G+++VV +     ++     A+ A           +  + Y  
Sbjct: 46  YIIDVINRASELVVLAVGMTLVVSASAGTDISVGAVMAVAASVCTRILAAGEVSVNEYAN 105

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              L +     ++  CG   G    K +   +    ++ +                  GI
Sbjct: 106 PYILAVLGGLAVAIVCGCFNGFLVAKLKIQPMVATLILFT---------------AGRGI 150

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                   +        +        +     ++  ++ +      +    ++TA+    
Sbjct: 151 SQLVTNGQITYIRVDAYKLLGNNIPGIPIPTPIFVAVIVVALTYVLL----KKTALGMYI 206

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           + +  N++A   +          A+A      G+AG   ++       +    +  +  I
Sbjct: 207 QAVGINERASRLVGLKSTKIIWLAYAFCGLCAGIAGLVASSRIYSADANNIGLNMELDAI 266

Query: 271 SIVILGGMT------SLSKIAKATAILIGVVELCCGMNFY 304
           + V LGG +      SL         +  +      M+  
Sbjct: 267 AAVALGGNSLGGGKFSLLGSVIGAYTIQALTTTLYAMSVP 306


>gi|121607534|ref|YP_995341.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121552174|gb|ABM56323.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 322

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/309 (13%), Positives = 95/309 (30%), Gaps = 23/309 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++             S +    +  Q+++  + A G ++V+ + G + L+C +  A
Sbjct: 20  FIALILACAFFASQSERFLSAQNFSLILQQVMVVAVIAIGQTLVILTAG-IDLSCGMVMA 78

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +G+     + + + LS  L I     ++   G++ GL   K       +    M+  F  
Sbjct: 79  LGSIVMTKMAASHDLSAPLAIACGIAVTVLFGLVNGLLVTKIALPPFIVTLGTMNIAFAI 138

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             +                      T             +FV+ +  + +  + M  L  
Sbjct: 139 TQLY-----------------SDAQTITDIPEGMTLLGGTFVLGQTAIVWGAVLMLALYL 181

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   LR TA       + +N +A            L  + ++  F G+A     A    
Sbjct: 182 IVWFALRETAPGRHVYAVGNNPEATRLTGIATDRVLLGVYMLAGLFYGIAALLSVARTGA 241

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P+  +      + ++V+      GG   +        I+         M       +L
Sbjct: 242 GDPNAGQTENLDAISAVVLGGTSLFGGRGMILGTLVGALIVGVFRNGLTLMGVSSVYQIL 301

Query: 311 KFDCSFNMR 319
                  + 
Sbjct: 302 VTGILVILA 310


>gi|62289514|ref|YP_221307.1| ribose ABC transporter [Brucella abortus bv. 1 str. 9-941]
 gi|82699444|ref|YP_414018.1| tetracycline resistance protein TetB [Brucella melitensis biovar
           Abortus 2308]
 gi|189023769|ref|YP_001934537.1| Tetracycline resistance protein TetB [Brucella abortus S19]
 gi|254688829|ref|ZP_05152083.1| Tetracycline resistance protein TetB [Brucella abortus bv. 6 str.
           870]
 gi|254696959|ref|ZP_05158787.1| Tetracycline resistance protein TetB [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254729860|ref|ZP_05188438.1| Tetracycline resistance protein TetB [Brucella abortus bv. 4 str.
           292]
 gi|256257076|ref|ZP_05462612.1| Tetracycline resistance protein TetB [Brucella abortus bv. 9 str.
           C68]
 gi|260545734|ref|ZP_05821475.1| tetracycline resistance protein TetB [Brucella abortus NCTC 8038]
 gi|260754312|ref|ZP_05866660.1| monosaccharide-transporting ATPase [Brucella abortus bv. 6 str.
           870]
 gi|260757531|ref|ZP_05869879.1| monosaccharide-transporting ATPase [Brucella abortus bv. 4 str.
           292]
 gi|260761356|ref|ZP_05873699.1| monosaccharide-transporting ATPase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260883337|ref|ZP_05894951.1| monosaccharide-transporting ATPase [Brucella abortus bv. 9 str.
           C68]
 gi|297247925|ref|ZP_06931643.1| ribose transport system permease [Brucella abortus bv. 5 str.
           B3196]
 gi|62195646|gb|AAX73946.1| RbsC-1, ribose ABC transporter [Brucella abortus bv. 1 str. 9-941]
 gi|82615545|emb|CAJ10522.1| Tetracycline resistance protein TetB:Bacterial inner-membrane
           translocator [Brucella melitensis biovar Abortus 2308]
 gi|189019341|gb|ACD72063.1| Tetracycline resistance protein TetB [Brucella abortus S19]
 gi|260097141|gb|EEW81016.1| tetracycline resistance protein TetB [Brucella abortus NCTC 8038]
 gi|260667849|gb|EEX54789.1| monosaccharide-transporting ATPase [Brucella abortus bv. 4 str.
           292]
 gi|260671788|gb|EEX58609.1| monosaccharide-transporting ATPase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260674420|gb|EEX61241.1| monosaccharide-transporting ATPase [Brucella abortus bv. 6 str.
           870]
 gi|260872865|gb|EEX79934.1| monosaccharide-transporting ATPase [Brucella abortus bv. 9 str.
           C68]
 gi|297175094|gb|EFH34441.1| ribose transport system permease [Brucella abortus bv. 5 str.
           B3196]
          Length = 333

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 87/301 (28%), Gaps = 17/301 (5%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      S   + ++  +     + A G + V+ S G L L+     A  A   ++  + 
Sbjct: 38  IANPNFISIDNLLNVATRSAFIAIIALGATYVI-SSGGLDLSVGAMVAFVASIMILFMNS 96

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             ++  +L+ ++A++                     I   I +     I           
Sbjct: 97  GMIADPVLMLIAAVMLALVVGAACGILNGIITTVGGIEPFIATLGTMGIYRGLTTW---- 152

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                         T+R+      +  ++    + +   ++ +   +A     L RT   
Sbjct: 153 -------LSQGGAITLRNPEIQSLYRPAYFGSVLGVPVPVIVIFVTAALAAFVLYRTRYG 205

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N+        ++   +  AF +    + +A   +       S       E  
Sbjct: 206 RHIIAVGSNEDVARYSGISVKKVRTIAFVIQGLCVAVAVLLYVPRLGSTSATTGLMWELQ 265

Query: 268 IVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V+      GG+  +        IL  +  +    +F     L     +  +    
Sbjct: 266 AITAVVVGGTALRGGVGRIWGTICGAFILEIIGNIMLLSSFVSEYLLGAIQGAIIIIAML 325

Query: 323 L 323
           +
Sbjct: 326 V 326


>gi|296156866|ref|ZP_06839703.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295892752|gb|EFG72533.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 333

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 96/306 (31%), Gaps = 27/306 (8%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             +L  L      +     ++  QI   V+ + G++ V+   G + L+     A+GA   
Sbjct: 40  MIVLFSLLSSHFLTYDTFSTIANQIPDLVVMSIGMTFVLIIAG-IDLSVGSVLALGAALT 98

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +   ++         +    +   G + G  ++ +R       +L + E  + +  +  
Sbjct: 99  SVAALQWHWPALPAALLGMAGATLTGCVTGAITVAWRIPSFI-VSLGVLEAARGLAYQLT 157

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
                  G                   F   P +F I   F+  +++ +           
Sbjct: 158 NSRTAYIG---------------DAFDFLSNPVAFGISPAFIIAIVVMVAAQFVL----- 197

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            RT        I  N++A           K++ FA+     G+A  F  +  +   P+  
Sbjct: 198 TRTVFGRYLVGIGTNEEAVRLAGVNPRLYKIAVFAMMGLLAGLASLFQISRLEAADPNAG 257

Query: 262 KFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +  E  ++ ++VI     +GG  S++       I+  +      +        +      
Sbjct: 258 QGIELQVIAAVVIGGTSLMGGRGSVTSTFFGVLIISVLAAGLAQIGATEPTKRIITGAVI 317

Query: 317 NMRHTT 322
            +    
Sbjct: 318 VVAVVL 323


>gi|300788858|ref|YP_003769149.1| branched-chain amino acid ABC transporter permease [Amycolatopsis
           mediterranei U32]
 gi|299798372|gb|ADJ48747.1| permease component of ABC-type branched-chain amino acid transport
           system [Amycolatopsis mediterranei U32]
          Length = 292

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 92/310 (29%), Gaps = 27/310 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +   +  ++ + A G  I+  +  +++         G Y   ++        W+   +
Sbjct: 8   VVNGLGKGAVFALLALGFVIIFKATEVVNFAHGSLVLFGGY---LVVVTRDALGWVGASL 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++S     ++    L  R  +    +L +  I  ++++  + +           RL  
Sbjct: 65  AGIVSAGLLGLLVERLLLSRSRHADANSLALLTIGVDVIVTEEIVR----------RLGV 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +        F    +         L     L  +  L  + +    A R   +N++
Sbjct: 115 TLPFLGGAWDAKPFQLGGITLFRTHLVALGVAAVLITAFWLAFKYSNWGVAMRAQAENRE 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK-FSENIIVISIVILGG 277
           A   +         +A+ V+    G+A  F A      +       S  +      ILGG
Sbjct: 175 AAALMGIRSSRVTATAWLVAGLLAGVAVLFIATQDFSGAGLSRGTHSIALAAFPAAILGG 234

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S +       ++  V  L      + F+    F     +                R  
Sbjct: 235 LDSTAGAVVGGLVVGLVEALSAQYVSFDFSKSAVFLVMLVVLVV-------------RPS 281

Query: 338 SLLRLRTPSN 347
            L   R  + 
Sbjct: 282 GLFGTRERTR 291


>gi|260463143|ref|ZP_05811345.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
 gi|259030993|gb|EEW32267.1| inner-membrane translocator [Mesorhizobium opportunistum WSM2075]
          Length = 301

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/285 (11%), Positives = 76/285 (26%), Gaps = 2/285 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A+G  +  G L   +L     +A    + ++  +     +WL +  
Sbjct: 8   VLNGLHSGALYALLAFGYVLTNGILHRTNLAYGALFAFCGQAMILTVAFGYQVLWLTLLA 67

Query: 99  SAMISGACGMIMG-LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           S ++     ++   L S                       +    + +  + I       
Sbjct: 68  SVLLGVVAALLYAALISHVLSRSVFEPLADRTPNAIVVTTLGILLVLSEASRIAADTHDL 127

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
           +L   +   I F           +        +            R++   +WR + D+ 
Sbjct: 128 WLPPMLAQPIVFAEGAGFKATLTLIQVLDCAAVLAAVLLATWVFARSSFGRSWRAVSDDP 187

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A       +      A         +AG   +     +S         + ++ +  +GG
Sbjct: 188 GAAALCGVDVRTVFRRAVLYGGLCAALAGVMASLYYGNVSFGS-GLVYGLKILFVTAVGG 246

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
             S  + A   A       L  G     +     +     M    
Sbjct: 247 YLSPPRAALGAAAFGMAESLWAGYFPIEWRDAWMYLFLVAMLVLI 291


>gi|114706506|ref|ZP_01439407.1| Bacterial inner-membrane translocator:Sodium:dicarboxylate
           symporter [Fulvimarina pelagi HTCC2506]
 gi|114537898|gb|EAU41021.1| Bacterial inner-membrane translocator:Sodium:dicarboxylate
           symporter [Fulvimarina pelagi HTCC2506]
          Length = 365

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/325 (9%), Positives = 90/325 (27%), Gaps = 10/325 (3%)

Query: 3   IFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
            F +     +       +   ++  +      S      M   + I+ + A G+ ++V  
Sbjct: 19  RFDIARILLEGRAFFALIAIIIVFSILSPVYFSVNNFLIMSSHVAIFGLLAIGM-LLVIL 77

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G + L+     A+       L                +   A    +    +      L
Sbjct: 78  TGGIDLSVGSVLALAGVVAGALMQGVAFESLGFTAYPPVWVVAILTCLVGAFVGLVNGVL 137

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
               +   ++   +             + + + L +     R  +    F          
Sbjct: 138 ----IAFFKVPAFVATLGLLYVARGVALLMTNGLTYNNLGGREALGNTGFDWLGFNRLFG 193

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +   ++ +  ++   +L L+RTA      +   N +A       +    ++ + +S    
Sbjct: 194 IPIGVIVLAVVAVIAMLILKRTAFGRWIYSTGGNARAAELSGVPVRGVTIAVYVLSGICS 253

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVEL 297
            +AG   ++      P   +  E   + ++V+      GG   +        ++  + + 
Sbjct: 254 AIAGLVLSSQLTSAGPTAGQTYELTAIAAVVVGGAALSGGRGRVGGTLLGAFVIGFLADG 313

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTT 322
              +    +   +       +    
Sbjct: 314 LVIIGVSTYWQTVFTGAVIVLAVLL 338


>gi|284043491|ref|YP_003393831.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283947712|gb|ADB50456.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 356

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 89/316 (28%), Gaps = 24/316 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           L L +Y        +V+  L            + + +  Q     + A G+++VV   G 
Sbjct: 20  LSLGRYTGAAVGFVLVFAFLAVTEPIFLTWDNWQNIIRTQSATLAI-ALGMTVVV-ISGG 77

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A       +   + G S  + +  +  +  A G + GL   + R  +  + 
Sbjct: 78  IDLSAGSIAAAAGMMLGL-TVQAGWSWPMGVLAAIALGVAMGGVNGLLIGRLRVPFFVVT 136

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
              MS      L+                       ++     F             +  
Sbjct: 137 LGTMSVYQSEALLSSGG----------------DTVSLFETASFMSLADLVNGNVGPIPT 180

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           V L +  ++ ++ L LRR+    +   +  N+ A       +    L  + +S     + 
Sbjct: 181 VGLIVMAMAVAMSLLLRRSTFGRSVFAVGSNEDAARLNGLRVPRTVLGVYVISGVAAAIG 240

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G          SP         ++  ++I      GG   +       A L  +      
Sbjct: 241 GIVLTGRLTSASPVADPNLVLAVIAGVLIGGTAFTGGDGGIFGTVLGVAFLGVIQNGLQL 300

Query: 301 MNFYYFNSLLKFDCSF 316
            +   F          
Sbjct: 301 SDISSFWQGTVSGLIL 316


>gi|257093215|ref|YP_003166856.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257045739|gb|ACV34927.1| inner-membrane translocator [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 309

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 99/310 (31%), Gaps = 18/310 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS-----IW 93
           +    +  ++Y + A G  ++  + G+ +          A +                 +
Sbjct: 8   LIGGLMAGMLYSLVALGFVLIFKASGVFNFAQGAMVLFAALAMARFAVWIPAWLGLDSPF 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L   ++ + +GA   ++     +    +L       + +   + I +     G +     
Sbjct: 68  LANTIAFLAAGALMFVVAWLVERLVLRHLVNQE-GATLLMATLGIAYVLEGVGTSIFGSD 126

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                +G     ++         ++     +   L    L A + L+ ++T    A R +
Sbjct: 127 VYKIDIGMPKDPVMILEGSFEGGLLINKEDFVAALIAAVLVALLALFFQKTVTGRALRAV 186

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            D+ +A  S+   +    +  + V+     +AG  + +            +  +  + +V
Sbjct: 187 ADDHQAAQSIGIPLNRIWVIVWCVAGVVALVAGVIWGSKL---GVQFSLATVALRGLPVV 243

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ILGG+TS+        I+    +L            ++   ++ +           + +L
Sbjct: 244 ILGGLTSIPGAIIGGLIIGVGEKLSEVYLGPMIGGGIEIWFAYQLA---------LVFLL 294

Query: 334 MRSHSLLRLR 343
            R   L   +
Sbjct: 295 FRPQGLFGEK 304


>gi|302540972|ref|ZP_07293314.1| ribose ABC transporter, permease [Streptomyces hygroscopicus ATCC
           53653]
 gi|302458590|gb|EFL21683.1| ribose ABC transporter, permease [Streptomyces himastatinicus ATCC
           53653]
          Length = 320

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 91/297 (30%), Gaps = 27/297 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           ++D  + +L V   +          S+  +      I    + A  ++++V   G + L+
Sbjct: 4   RWDTAVGVLLVAVFVTGLGTTDGFASRDNLAFAFNDIAEVALMALPMTLLV-VAGQVDLS 62

Query: 70  CVIAYAIG-AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                 +  A +  +    +     + + +   ++G       +  +      + I TL 
Sbjct: 63  VASMLGLSSALTGELWDKGWAFETIVPVVLLVGVAGGLLNGWLVTRVGLPSLAVTIGTLA 122

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +     ++++    IT+                             +  +   F+ Y + 
Sbjct: 123 LYRGLASVVLGSNAITDFP------------------ETYAKWAVDTTTVPGTFLTYPVA 164

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
               L+    + L  T +  +   I   + A +     +   KL  F V+      AG  
Sbjct: 165 LFIVLAVVAAVVLHSTGLGRSLFAIGAQEDAAYFAGIRVKRIKLLLFVVAGLVSAFAGVV 224

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCC 299
           F                 ++VI+ V+LGG+       ++        ++  +  L  
Sbjct: 225 FTLRYGSA-RADNGQGFEMLVIAAVLLGGVDFDGGKGTVFGAVAGVLLIGVLKNLLT 280


>gi|83855169|ref|ZP_00948699.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83941691|ref|ZP_00954153.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
 gi|83843012|gb|EAP82179.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83847511|gb|EAP85386.1| branched-chain amino acid ABC transporter, permease protein
           [Sulfitobacter sp. EE-36]
          Length = 329

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/325 (11%), Positives = 99/325 (30%), Gaps = 32/325 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---------------- 82
             +  +  ++Y + A G  ++  + G+ +    +     A +                  
Sbjct: 12  FLNGLMAGVLYALVALGFVLIYKASGIFNYAQGVMALFAALTLAGIIDGQVPFSHLINAI 71

Query: 83  ----ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               I    + +  +L I ++ ++       +     +       I   + +      L 
Sbjct: 72  LGTDIHHFGWHVPAFLAILLTMVVMIGLAYAVQRLVFRHLVGQEPIILFMATIGLAYFLE 131

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +  G     +   L     T      F  F   F I  + +   ++    +   ++
Sbjct: 132 GVGDLMWGSDIKSMDVGLPQGLNTWIDDTTFNAFGYGFFIDNLDIVASIIAALLV-IGLV 190

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           ++ + T    A R + D+ +A  S+  ++ F  +  ++++     +AG  +         
Sbjct: 191 MFAQYTKQGRAMRAVADDHQAALSVGVSLNFIWILVWSLAGFVALVAGIMWGTKSGVQFS 250

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                   +  + +++LGG TS+        I+    +L   +    F      +     
Sbjct: 251 LS---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFLIGAPFLGGATENW---- 303

Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343
                  +   + ++ R   L   +
Sbjct: 304 ----FAYMLALIFLVFRPQGLFGEK 324


>gi|145295392|ref|YP_001138213.1| hypothetical protein cgR_1330 [Corynebacterium glutamicum R]
 gi|140845312|dbj|BAF54311.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 324

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 94/311 (30%), Gaps = 30/311 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  +   + LF+      +   + ++GIQ     + A+G++ V+ + G + L+     
Sbjct: 26  ALVGLIALCVGLFIATPHFLTIPNLINIGIQSATVAILAFGMTFVIVTAG-IDLSVGSVA 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GA +     +  GL  W+ + +   I    G I G+     +                
Sbjct: 85  ALGAMASAYFFAEVGLPGWITLLIGLFIGLLAGAISGISIAYGKLPAFI----------- 133

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  S I      ++       +   +L M    
Sbjct: 134 -----------ATLAMMSIARGITLVISQGSPIPSAPAVNALGRTYFGIPMPILMMALAG 182

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N +A       +    +  +A++  +  +AG        
Sbjct: 183 IVCWFILSRTVLGRSMYAIGGNMEAARLSGLPVKKILVMVYALAGVYAALAGLVMTGRLS 242

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              P        +  I+ V++GG          +       +L  +      +N   F  
Sbjct: 243 SAQPQA-GVGYELDAIAAVVIGGASLAGGTGKATGTLIGAILLAVIRNGLNILNVSSFWQ 301

Query: 309 LLKFDCSFNMR 319
            +   C   + 
Sbjct: 302 QIVIGCVIALA 312


>gi|91212681|ref|YP_542667.1| ribose transport system permease RbsC [Escherichia coli UTI89]
 gi|117625541|ref|YP_858864.1| putative ribose transport system permease protein RbsC [Escherichia
           coli APEC O1]
 gi|218560321|ref|YP_002393234.1| sugar transporter subunit: membrane component of ABC superfamily
           [Escherichia coli S88]
 gi|237705993|ref|ZP_04536474.1| ribose transport system permease RbsC [Escherichia sp. 3_2_53FAA]
 gi|91074255|gb|ABE09136.1| ribose transport system permease protein RbsC [Escherichia coli
           UTI89]
 gi|115514665|gb|ABJ02740.1| putative ribose transport system permease protein RbsC [Escherichia
           coli APEC O1]
 gi|218367090|emb|CAR04861.1| putative sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|226899033|gb|EEH85292.1| ribose transport system permease RbsC [Escherichia sp. 3_2_53FAA]
 gi|294492567|gb|ADE91323.1| putative sugar ABC transporter, permease protein [Escherichia coli
           IHE3034]
 gi|307625149|gb|ADN69453.1| putative sugar transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli UM146]
 gi|315289043|gb|EFU48441.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 110-3]
 gi|323951230|gb|EGB47105.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H252]
 gi|323957601|gb|EGB53315.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H263]
          Length = 329

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 103/321 (32%), Gaps = 27/321 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           ++ +    +    VV  +L      +  +   I ++ +Q+ I  + A+G++ V+  LG +
Sbjct: 22  KVFRQYGGILSGMVVLIILFSFINDSFFTANNITNIILQVSIIAITAYGMTYVL-LLGDI 80

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+      +  S      ++L+   ++I+     ++        G    I T
Sbjct: 81  DLSVGSTIALIGTFAALGAS--WGIPFVLLVPLSIIAALTLGMINGGLTAIAGIPSFIVT 138

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           +    IF+ I                             +I+   F +      +++   
Sbjct: 139 VATMGIFRGIAYIVTDGM-------------------PIMIKDDAFLALGNGEFLYIPIP 179

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  L       L +T           N++A       +   K+  F +++   G++G
Sbjct: 180 IWILIILLLINHFILTKTTFGRKIYITGGNKEAAIYSGINVTRLKIKVFMITAVLAGISG 239

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGM 301
              A+      P+     E   + + V+      GG  ++         +  +      M
Sbjct: 240 MILASRLYSGQPNSALSYELDAIAAAVLGGTSLNGGYGTVVGTVIGALTIGVINNGMNLM 299

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
           N  YF  ++       +    
Sbjct: 300 NVPYFYQMVVKGLVILVAVYF 320


>gi|220914814|ref|YP_002490122.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219952565|gb|ACL62955.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 322

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 81/282 (28%), Gaps = 15/282 (5%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
            V+FA   ++V+    + +        +  Y+     S  GL  WL   ++ + +     
Sbjct: 21  LVLFAVAFALVLKVNRIFNFAQAAVMTVAFYAAHATVSMAGLPGWLGCLLALVAAVTASA 80

Query: 109 IMGLPSLK--FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           ++ L   +   R     +   I + I   ++     +  G     +   L++  T V ++
Sbjct: 81  LLELVGFRSLRRRRATPMFVFIFTLIVSEMVAYLAMLIFGTWPTTIFPSLFWPVTLVGNV 140

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                   +           +  M    A +  +LR          + DN          
Sbjct: 141 AVSDWDLPA-----------IASMVGALALLFGFLRYAQTGRFMIAVADNPDLAELYGIE 189

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
                L+    +   +G+    + +               +  ++  I+GG+ +L   A 
Sbjct: 190 KDRVYLATIVTAGLLVGIGMCLYGSRAQV--QPTTSIELMLFAVAATIIGGIGNLWGAAL 247

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
               L  V           +   L +   F         I L
Sbjct: 248 TAVALGVVQNASVLFIPAEWQGFLLYVFLFLAIVFLPNGIRL 289


>gi|172040113|ref|YP_001799827.1| putative ABC transport system, permease protein [Corynebacterium
           urealyticum DSM 7109]
 gi|171851417|emb|CAQ04393.1| putative ABC transport system, permease protein [Corynebacterium
           urealyticum DSM 7109]
          Length = 382

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/291 (15%), Positives = 95/291 (32%), Gaps = 13/291 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             + +    + A++   L  +   A +S     ++        + A G+ +++       
Sbjct: 59  FKRPELTSLVGAILIFALFMILAPAFRSADAFATVLYSSSTLGIIALGVGLLM-IGDEFD 117

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A    A +  +L     L+ W  + +S +IS + G I G    K  G +  + TL
Sbjct: 118 LSSGVAVTTAALAATMLNYNLWLNSWTGVFLSLIISLSIGAINGYLVTKT-GIHSFLITL 176

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            M  + Q I +    +  G+        +    +        F      V   +  + + 
Sbjct: 177 AMFLMLQGINLAVTKLVTGQVATPTISDMEGYNSAKAFFASSFEVFGVDVQITVVWWLLF 236

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +            +T   N    +  +  A  ++   +   K++ F   +      G 
Sbjct: 237 VALASWLLF------KTRFGNWIFAVGGDADAARAVGVPVRRVKITLFMFVAFSAWFVGM 290

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIG 293
               + D I       +E + +I+ VI      GG  +    A    I   
Sbjct: 291 HNLFAFDSIQAGQGVGNEFLYIIAAVIGGCSLTGGRGTAIGTAIGALIFGM 341


>gi|332286185|ref|YP_004418096.1| inner-membrane translocator [Pusillimonas sp. T7-7]
 gi|330430138|gb|AEC21472.1| inner-membrane translocator [Pusillimonas sp. T7-7]
          Length = 306

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 95/305 (31%), Gaps = 16/305 (5%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     ++  + A GL++V G +  ++L     Y +GA+    L S  G  +   + + 
Sbjct: 11  LNGLQLGVLLFLMAAGLTLVFGIMSFVNLAHGSMYMMGAFFAASLYSYTGSFVLAALLLI 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             +      +  +   K          L    +        + I                
Sbjct: 71  PAMLALGLAVEWVALRKLYQRDHLDQVLATFGLILFFNEIARIIWG-----------PSP 119

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                            V Y  + + ++     ++    L + RT I    R    N+  
Sbjct: 120 YYMDVPEFLLGAINLFGVRYPAYRFVIIASGLLIALGCYLLIHRTRIGMLIRAGATNRTM 179

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   I+      FA+ +   G+AG                    I+ + ++++GG+ 
Sbjct: 180 VGALGVNIVMLNSLLFALGAVLAGLAGLLAGPIMSV--QAGMGEPILILTMVVIVIGGIG 237

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLL---KFDCSFNMRHTTLMVIALFLVILMRS 336
           S+     A  I+  V  L   +      S L     D +     + ++ + + +V+ ++ 
Sbjct: 238 SIRGAFYAALIVGVVDTLGRTLLPTLLRSFLERSSADIAGPALASMMIYLLMAVVLAIKP 297

Query: 337 HSLLR 341
             L  
Sbjct: 298 KGLFP 302


>gi|206896536|ref|YP_002247683.1| branched-chain amino acid ABC transporter permease protein
           [Coprothermobacter proteolyticus DSM 5265]
 gi|206739153|gb|ACI18231.1| branched-chain amino acid ABC transporter permease protein
           [Coprothermobacter proteolyticus DSM 5265]
          Length = 286

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 85/307 (27%), Gaps = 28/307 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        IY + A G+ +++ +  +++           Y       R       L  V
Sbjct: 5   VLRGLATGSIYSLTAVGIVLILSTTNVMNFAQGDTGMFLTYIAFFFILRGIAPSLTLPIV 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +    ++      K +        +I   +                          
Sbjct: 65  IVAGAVLGYLVYKGLISKAKKSSHLGMMIITLGLTMIFEGIVATFFG------------N 112

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +      LI         VI +      L+    +   +   L RT I  A R+I D++ 
Sbjct: 113 IPLLFPPLIPGDPVHFGSVILDRQDILCLVTALVVFGILSFILYRTKIGIAARSIADDEY 172

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L   I       +A+S    G+AG   A         +F     +   +  +LGGM
Sbjct: 173 ASRVLGIPIDRIHSFIWAISFGLAGLAGIMTAPRLSL--QPLFMVVVQLKAFTAAVLGGM 230

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++       IL  +  L          S                ++ +  ++L   + 
Sbjct: 231 NSVTGAIWGGLILGVMENLVAYYVPAIKES--------------FSLLLIVAILLFLPNG 276

Query: 339 LLRLRTP 345
           L   R  
Sbjct: 277 LFGSREA 283


>gi|254299644|ref|ZP_04967093.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 406e]
 gi|157809575|gb|EDO86745.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 406e]
          Length = 344

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 92/311 (29%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 45  VLVLLCVGFGFMTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 103

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S      WL IP +  +  A G++ G      R     +    ++ +     
Sbjct: 104 A-VASLLASNLPGWGWLGIPAALAVGLAFGVVNGGLISFLRLPPFIVTLGALTAVRGIAR 162

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    +G           F        + + ++++    + A  
Sbjct: 163 L--------------------MGNDTTIFNPQLPFAFIGNGSILGVPWLVVIALAVVAIS 202

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +      +  N +A       +   +L  +A S    G+     AA     +
Sbjct: 203 WFILRRTVLGMRIYAVGGNPEAARLSGINVRGIELFVYASSGLLAGLGALMSAARLYAAN 262

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 263 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLVGALIIAVLSNGLVLLGVSDIWQYII 322

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 323 KGLVIIGAVAL 333


>gi|323357104|ref|YP_004223500.1| ribose/xylose/arabinose/galactoside ABC transporters, permease
           components [Microbacterium testaceum StLB037]
 gi|323273475|dbj|BAJ73620.1| ribose/xylose/arabinose/galactoside ABC-type transport systems,
           permease components [Microbacterium testaceum StLB037]
          Length = 321

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 82/280 (29%), Gaps = 28/280 (10%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
                    +   I  +     +Y + A   ++V+   G L L+    +A+G  +  I  
Sbjct: 27  AQAANPQALAPANIVEILRSSALYFIGASAATLVL-VGGGLDLSIGSLFAVGGVTVGISM 85

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           +        +I   A+ +    +   L +      ++A   ++                 
Sbjct: 86  NAGVPWPLAIIVALAVCALLGLVNASLITWVGVPPFIATLGMLF---------------- 129

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
             +G+ V            S        + F I  +  Y V +G+           + T 
Sbjct: 130 AASGVVVVSTGGIPRFGFPSAFTDLAQLNLFGIPLLVYYAVAVGIAAHVVL-----QHTV 184

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
                R    N  A  +         +S + +S+   G+ G   A+      P       
Sbjct: 185 FGYNIRAFGGNATAARANGIRASRMNISLYVISAVVAGLCGVLLASRVATADPGAGGTGF 244

Query: 266 NIIVISIVIL------GGMTSLSKIAKATAILIGVVELCC 299
              V++ VI+      GG+ +++  A    +   +     
Sbjct: 245 AFQVLAAVIIGGTSLFGGVGTITGTALGALLFAVINNTLA 284


>gi|257056303|ref|YP_003134135.1| branched-chain amino acid ABC-type transport system, permease
           component [Saccharomonospora viridis DSM 43017]
 gi|256586175|gb|ACU97308.1| branched-chain amino acid ABC-type transport system, permease
           component [Saccharomonospora viridis DSM 43017]
          Length = 292

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 89/303 (29%), Gaps = 25/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +   Q  IY  FA  L ++  S  +++        +  Y   +     G   W+   V+
Sbjct: 9   LNGISQGAIYAAFALALVLIWRSTRIVNFAQGAMAMLTTYF-ALALIESGQPYWVGFVVA 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +     G+++    ++       +  +I++      L     I  G +           
Sbjct: 68  LIAGFVLGVVLERLLIRPVEGGPELNAVIVTLGLFVALQALAAILFGSSYESFPAPFS-- 125

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                  +  F    + V +  F  +V+L +  +  +++   R T +    R    +++ 
Sbjct: 126 -------LTGFSVGGTTVAFTPFNAFVVLAVLAVMLALVALFRLTDLGLRMRASALHKEV 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L   +       +A+++    +AG   A     +    +     +      +LGG+ 
Sbjct: 179 SRLLGIRVGHMLTLGWALAAVVGSLAGLLIAG--GSLIHPAYMEPVIVFGFVAAVLGGLD 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S +       ++   +    G       +L        +                R   L
Sbjct: 237 SPTGAVVGGLLVGLALSYVSGYLGSELVALAALAILVAVLLA-------------RPQGL 283

Query: 340 LRL 342
              
Sbjct: 284 FGR 286


>gi|159186199|ref|NP_356140.2| ABC transporter, membrane spanning protein (branched chain amino
           acid) [Agrobacterium tumefaciens str. C58]
 gi|159141333|gb|AAK88925.2| ABC transporter, membrane spanning protein (branched chain amino
           acid) [Agrobacterium tumefaciens str. C58]
          Length = 287

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 88/304 (28%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       ++  + + GLS+ +G + +++L       IG Y         GL   + I V
Sbjct: 8   LIDALAYGMVLFIISIGLSVTMGLMRVVNLAHGAFAMIGGYLASYAAHGLGLGYAMAILV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +    + +     +       +  ++M+      +I       G     +      
Sbjct: 68  AIVGTIVIAIPLERFLYRRIYGAPELTQVLMTIGITFCIIGIANYVFGPTLKTIPLPQQL 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G T             F        + +     ++ ++     +TA     R   DN  
Sbjct: 128 AGPT----------DLGFRTIATHRIFAIACGLAVAGALWFTFEKTAFGIKLRAAVDNAA 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L          +FA++     M G   A          +     +  + +V +GG 
Sbjct: 178 MAAALGVRTEIIYAVSFAIAVGLAAMGGVIGAELLPV--EPYYALRYMVTFLVVVSVGGA 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  +L  +      +                        +A+ ++I +    
Sbjct: 236 GSIPGALIACLLLGAIDTTGRYLA--------------PEYGEFFFYLAVIVIITLFPRG 281

Query: 339 LLRL 342
           LL  
Sbjct: 282 LLGR 285


>gi|126443646|ref|YP_001061291.1| carbohydrate ABC transporter permease [Burkholderia pseudomallei
           668]
 gi|126458106|ref|YP_001074239.1| carbohydrate ABC transporter permease [Burkholderia pseudomallei
           1106a]
 gi|217423096|ref|ZP_03454598.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 576]
 gi|237507730|ref|ZP_04520445.1| ABC transporter, carbohydrate uptake transporter-2 [Burkholderia
           pseudomallei MSHR346]
 gi|242311089|ref|ZP_04810106.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 1106b]
 gi|254195566|ref|ZP_04901994.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei S13]
 gi|126223137|gb|ABN86642.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 668]
 gi|126231874|gb|ABN95287.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 1106a]
 gi|169652313|gb|EDS85006.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei S13]
 gi|217394004|gb|EEC34024.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 576]
 gi|234999935|gb|EEP49359.1| ABC transporter, carbohydrate uptake transporter-2 [Burkholderia
           pseudomallei MSHR346]
 gi|242134328|gb|EES20731.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 1106b]
          Length = 344

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 92/311 (29%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 45  VLVLLCVGFGFMTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 103

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S      WL IP +  +  A G++ G      R     +    ++ +     
Sbjct: 104 A-VASLLASNLPGWGWLGIPAALAVGLAFGVVNGGLISFLRLPPFIVTLGALTAVRGIAR 162

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    +G           F        + + ++++    + A  
Sbjct: 163 L--------------------MGNDTTIFNPQLPFAFIGNGSILGVPWLVVIALAVVAIS 202

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +      +  N +A       +   +L  +A S    G+     AA     +
Sbjct: 203 WFILRRTVLGMRIYAVGGNPEAARLSGINVRGIELFVYASSGLLAGLGALMSAARLYAAN 262

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 263 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLSNGLVLLGVSDIWQYII 322

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 323 KGLVIIGAVAL 333


>gi|310816778|ref|YP_003964742.1| branched-chain amino acid ABC transporter, permease protein
           [Ketogulonicigenium vulgare Y25]
 gi|308755513|gb|ADO43442.1| branched-chain amino acid ABC transporter, permease protein
           [Ketogulonicigenium vulgare Y25]
          Length = 384

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 35/305 (11%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            +L L        L   +G       +  +  + L   + A  + ++ G  G+LSL  + 
Sbjct: 15  FLLVLAVFTVVATLLSQIGIGAVSTSMVKVLGRTLCLALVAVAMDVIWGYCGILSLGHMA 74

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVS-----------------AMISGACGMIMGLPSL 115
            + IG Y+           + +   ++                  +        +     
Sbjct: 75  FFGIGGYAIGQWLMYARTEMIVAGTLAASPLPPTALEVKNAVASQIFGVVGTSELPWVWG 134

Query: 116 KFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR---- 171
                 L +A +++      ++  W    +   G+Y++     +   +   +        
Sbjct: 135 FAHSLPLQLAMVVLVPGLVALVFGWLAFRSRVTGVYLSILTQAMTLALSLWLFQNDSGLR 194

Query: 172 --------------FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                                  +   +       L      ++    + +  R IRD++
Sbjct: 195 GNNGLSGLQNLPGLDHWGQDFIAVVFLWASALALGLGYVFFAFITSGKMGSVIRAIRDDE 254

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                L   +   KL  F V++    +AGA +      I+P       +I +   V +GG
Sbjct: 255 ARVRFLGYGVEGFKLFIFTVTACVAAIAGALYYPQAGIINPAEVAPIASIYLAVWVAIGG 314

Query: 278 MTSLS 282
              L 
Sbjct: 315 RGRLY 319


>gi|257468928|ref|ZP_05633022.1| beta-methylgalactoside transporter inner membrane component
           [Fusobacterium ulcerans ATCC 49185]
 gi|317063176|ref|ZP_07927661.1| galactoside transport system permease mglC [Fusobacterium ulcerans
           ATCC 49185]
 gi|313688852|gb|EFS25687.1| galactoside transport system permease mglC [Fusobacterium ulcerans
           ATCC 49185]
          Length = 339

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/310 (10%), Positives = 89/310 (28%), Gaps = 8/310 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+  +  +L+     +  S +   ++  Q  +  + A G++ ++ + G   L+     
Sbjct: 21  LYLVLFLMLILIIAKEPSFLSIRNFKNILTQSSVRAIIALGVAGLIVTQG-TDLSVGRQV 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A     L         +   +         +I+ +  +        I   +    F 
Sbjct: 80  GFSAVISATLLQATTNVNKVFPNLEEFPVIGAILIVMVVGMIIGSINGLIVAKLNVHPFI 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L     +    +  Y       +    +S   F +       + +    +   +  + 
Sbjct: 140 ATLGMMTIVYGINSLYYDYVGASPISGFSKSYSSFAQGYIGTPSFNMSYLIIYAAIATVI 199

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I+    +T        +  N +A       + +  +  +A+S  +    G   A    
Sbjct: 200 MWILWN--KTKFGKNVFAVGGNPEAAKVSGVNVAWTLVKIYALSGMYYAFGGLLEAGRIG 257

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + + VI      GG+  +S +     IL  +      +    +   
Sbjct: 258 SATNNLGNMYEMDAIAACVIGGVSFYGGVGKISGVITGVIILTVINYGLTYVGVSPYWQY 317

Query: 310 LKFDCSFNMR 319
           +         
Sbjct: 318 IIKGMIIVAA 327


>gi|255262235|ref|ZP_05341577.1| hypothetical protein TR2A62_0926 [Thalassiobium sp. R2A62]
 gi|255104570|gb|EET47244.1| hypothetical protein TR2A62_0926 [Thalassiobium sp. R2A62]
          Length = 357

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 91/298 (30%), Gaps = 14/298 (4%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
             +  ++  +  + +Q+ I  + A G++ V+ + G + L+     A  A   +  G    
Sbjct: 60  FDSIFNEARLQIIILQVAIIGIIALGVTQVIITAG-IDLSSGPLVAATAMIAMSFGQTE- 117

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
               L+   +   +      M LP +      LA   +I       I     P      G
Sbjct: 118 ----LVNGFANPKALFGSWAMDLPVIIPVVVGLAFGAMIGLINGTFIAYFRIPPFIATLG 173

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           +++  R   L  +  + I F     +++   +      + +        L +  T     
Sbjct: 174 MFLFCRGIALWWSGGNPISFPTDSYAWIGSGMMPVVWFVILA---IVFQLIMSYTVYGKH 230

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              I  N++A       +   KL  + ++S     AG   ++        M +F E   +
Sbjct: 231 TYAIGSNEEAARMSGINVKRHKLMVYMIASMLAAFAGIVLSSKAVTAQAGMGEFYELFAI 290

Query: 270 ISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
              VI      GG  S+        +L  +      +       L+            
Sbjct: 291 AMAVIGGISLQGGRGSIIGTVLGAMVLGVIRSGFTYIKLDGSYQLMAMGSIIVAAVIL 348


>gi|196041854|ref|ZP_03109143.1| ribose ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
 gi|228913357|ref|ZP_04076990.1| Ribose ABC transporter [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229183002|ref|ZP_04310234.1| Ribose ABC transporter [Bacillus cereus BGSC 6E1]
 gi|196027348|gb|EDX65966.1| ribose ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
 gi|228600459|gb|EEK58047.1| Ribose ABC transporter [Bacillus cereus BGSC 6E1]
 gi|228846266|gb|EEM91285.1| Ribose ABC transporter [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 311

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 95/312 (30%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +  +++     A      + ++  Q+ I  + A+G++ V+   G + L+     A
Sbjct: 14  LIGLALIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     + +        +     +++G    I+    +        IATL    IF+ 
Sbjct: 73  LSSALVAGMMASGMDPFLAMAV--GLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRG 130

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L     F      Y + +    + M    A
Sbjct: 131 LTL-----------------VYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFA 173

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L++T        I  N+ A       +   K+  + +S     +AG    +  D 
Sbjct: 174 VLYFILKKTTFGRRTFAIGGNEAAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDS 233

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V     + GG   +        I+  +      +    F   +
Sbjct: 234 AQPTAGTSYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQV 293

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 294 VKGLVILLAVLI 305


>gi|162451596|ref|YP_001613963.1| transport system permease protein [Sorangium cellulosum 'So ce 56']
 gi|161162178|emb|CAN93483.1| Transport system permease protein [Sorangium cellulosum 'So ce 56']
          Length = 313

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/322 (11%), Positives = 91/322 (28%), Gaps = 31/322 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +   +   L  L +VY L   L        + + +M  Q ++  + A G+++V+   G +
Sbjct: 3   KRPPWVGPLVALLLVYALFAALTPDTFLRSQNLLTMARQTVVVGICAVGMTLVIA-TGGI 61

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A            +   +   +  + + +    ++    +         +  
Sbjct: 62  DLSTGSLVA------------FTTVVLAKLLRAGVPALPAALVAAAAAGLVGALVGTLVG 109

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
                 F   L     +     G+    ++      + +L+          I       V
Sbjct: 110 RARMVPFVVTLGTMSALRGAAKGLASEQKIDADPRGLDALLSSDITAPGLWIAAALAILV 169

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
              + F           T        +  N+ A           K++ + +SS   G+AG
Sbjct: 170 FAVLMF-----------TRFGRHVFAVGSNEAAARLCGIDTGRVKIAVYTLSSLLAGVAG 218

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCG 300
                S   +          + VI+ V++GG        S++       ++  +      
Sbjct: 219 VME-FSTLTVGDPTDSIGLELEVIAAVVIGGAPLSGGEGSVAGSVIGALLITVIRTGGVH 277

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +    +   +       +    
Sbjct: 278 LGLPSWVQEIATGAIIVIAVAV 299


>gi|158423063|ref|YP_001524355.1| branched-chain amino acid uptake ABC transporter permease
           [Azorhizobium caulinodans ORS 571]
 gi|158329952|dbj|BAF87437.1| branched-chain amino acid uptake ABC transporter permease
           [Azorhizobium caulinodans ORS 571]
          Length = 287

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 85/303 (28%), Gaps = 26/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
                  ++  + + GLS+ +G + + +L       IG Y         GL   + + ++
Sbjct: 9   VDALAYGMVLFVISIGLSVTMGLMRVTNLAHGAFAMIGGYIASYAARDLGLGYGVAVLLA 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            + + A  + +     +       +  ++M+      +I       G     +       
Sbjct: 69  VVGTVAIAIPIERLLYRRIYGAPELTQVLMTIGITFCIIGIANYVFGPTLKTIPLPQTLR 128

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                           F        + ++    ++A++   + +T      R   DN   
Sbjct: 129 EP----------VDLGFRTIGAQRVFAIVCGLAVAAALWFLIEKTRFGVKLRASVDNAAM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L          +FA +       G   A          +     +  + +V +GG  
Sbjct: 179 AAALGVRTQVVYAVSFAAAVGLAAFGGVVGAELLPV--EPYYALRYMVTFLVVVSVGGTG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L  +      ++                       +A+  ++ +    L
Sbjct: 237 SIPGALLACLLLSAIDTTGRYLS--------------PEYGEFFFYLAVIAIVCLFPRGL 282

Query: 340 LRL 342
           +  
Sbjct: 283 IAR 285


>gi|254182854|ref|ZP_04889447.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 1655]
 gi|184213388|gb|EDU10431.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 1655]
          Length = 344

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 92/311 (29%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 45  VLVLLCVGFGFMTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 103

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S      WL IP +  +  A G++ G      R     +    ++ +     
Sbjct: 104 A-VASLLASNLPGWGWLGIPAALAVGLAFGVVNGGLISFLRLPPFIVTLGALTAVRGIAR 162

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    +G           F        + + ++++    + A  
Sbjct: 163 L--------------------MGNDTTIFNPQLPFAFIGNGSLLGVPWLVVIALAVVAIS 202

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +      +  N +A       +   +L  +A S    G+     AA     +
Sbjct: 203 WFILRRTVLGMRIYAVGGNPEAARLSGINVRGIELFVYASSGLLAGLGALMSAARLYAAN 262

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 263 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLSNGLVLLGVSDIWQYII 322

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 323 KGLVIIGAVAL 333


>gi|218515417|ref|ZP_03512257.1| amino acid ABC transporter, permease protein [Rhizobium etli 8C-3]
          Length = 85

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL+ IA A  +++G  E    M+  +  ++   D +  +    L  +A+ +V+L +   
Sbjct: 1   GSLTGIAIAAIVMVGGTEALREMD--FLKAVFGPDFTPELYRMLLFGLAMVVVMLFKPRG 58

Query: 339 LLRLRTPSNFLER 351
            +  R P+ FL+ 
Sbjct: 59  FVGSREPTAFLKE 71


>gi|254455457|ref|ZP_05068886.1| branched-chain amino acid transport system/permease component
           [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082459|gb|EDZ59885.1| branched-chain amino acid transport system/permease component
           [Candidatus Pelagibacter sp. HTCC7211]
          Length = 443

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 64/184 (34%), Gaps = 12/184 (6%)

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
              S V  ++    + L +  +   +      +      R IRDN++A  ++   ++   
Sbjct: 256 IEGSSVFVKLCYSGLFLTVVIILLILTQKALYSPWGRMMRAIRDNEEAANAMGKNVVKQH 315

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS-ENIIVISIVILGGMTSLSKIAKATAI 290
           L  F + SA +G+AGA         +P  ++      ++  +VI+GG  +         +
Sbjct: 316 LLIFILGSAIVGIAGAMLVTQDGLFTPGSYRPMRYTFLIWVMVIVGGSGNNFGAILGGFV 375

Query: 291 LIGVVELCCGMNFYYFNSLLK-----------FDCSFNMRHTTLMVIALFLVILMRSHSL 339
           +  +      +  +  N                  S       +M + L L++  R   +
Sbjct: 376 VWFLWIEAAPIALFLINFFTAGISETNALKAHLIESVPYFRFLMMGLGLLLIMRYRPKGI 435

Query: 340 LRLR 343
           L  +
Sbjct: 436 LPEK 439



 Score = 38.3 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 35/92 (38%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L + +G  +S     S+    LI  +   G +I  G  GL++   +   A+G  + V++ 
Sbjct: 4   LIILVGLFQSWNIALSIFNLCLISAVMTMGANIQWGYAGLINFGIMGYTALGGLAAVLIS 63

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
                  W       ++S    ++M L     
Sbjct: 64  VDPVQEAWSAGGFDILMSLWLIVVMVLVVRFI 95


>gi|170025866|ref|YP_001722371.1| monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|209573024|sp|B1JLQ1|LSRC_YERPY RecName: Full=Autoinducer 2 import system permease protein lsrC;
           Short=AI-2 import system permease protein lsrC
 gi|169752400|gb|ACA69918.1| Monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
          Length = 351

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/316 (12%), Positives = 90/316 (28%), Gaps = 31/316 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            N  +    L  +    LL +      S +    +     I ++ A G ++V+     + 
Sbjct: 6   QNNREGTALLAILTLFALLGIIDRNYFSLQTFTMIFSSAQILILLAIGATLVM-LTRNID 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA-- 125
           ++      + A +  +     G  +      + ++    G   G+     R   +     
Sbjct: 65  VSVGSITGLCAVTVGM-ALNAGFGLVASCLFALLVGMVAGFFNGILVTWLRIPAIVATLG 123

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL +      +L   K I    A                         S        +  
Sbjct: 124 TLGLYRGLMLLLTGGKWIEGLPA----------------------DLKSLSTPILFSISP 161

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +      L  ++   L  TA   ++    DN +    L       ++ AF+++     +A
Sbjct: 162 IGWLTMLLILAMAWLLGNTAFGRSFYATGDNLQGARQLGVRTDSIRIFAFSMNGVMAALA 221

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCG 300
           G  FA+    I        E   + + V     +LGG  ++        +L  +  +   
Sbjct: 222 GIVFASQIGFIPNQTGNGLEMKAIAACVLGGISLLGGTGTIIGAILGAFLLTQIDSVLVL 281

Query: 301 MNFYYFNSLLKFDCSF 316
           +    + +        
Sbjct: 282 LRLPAWWNDFIAGLVL 297


>gi|288930483|ref|YP_003434543.1| branched-chain amino acid ABC transporter permease [Ferroglobus
           placidus DSM 10642]
 gi|288892731|gb|ADC64268.1| inner-membrane translocator [Ferroglobus placidus DSM 10642]
          Length = 292

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/309 (10%), Positives = 90/309 (29%), Gaps = 27/309 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            ++    +Q     + A G S+  G   L +      Y +  +      + + +     +
Sbjct: 6   NFLIYGLVQSAFLSLVAIGFSLTYGISRLPNFAHGALYILAGFLIWNGLNVWKIGYLPSV 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ + +   G  +    +           +        ++   +          +   L
Sbjct: 66  VLAIIFTALIGYTLYYGIIIRVRGMEVSEVIATFAFSFVVVELLRYFGLFGLSYTLPPFL 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                             + ++ +     V++    L A + L+   T    A+R I  +
Sbjct: 126 R------------GSLEFAGIVLDYQRLIVIVSTLALVAFLYLFTHYTKTGLAFRAIAQD 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++    L          + A  SA   +A A +       S    +       + + ILG
Sbjct: 174 EQVAMMLGIDSDRVAALSLAFGSALAALAAAIWIPVSQLASESALEILLY--ALVVSILG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S++ +  A+ I+                               + ++A+ +++L + 
Sbjct: 232 GLGSVAGVIVASLIIGYAQVFTASFI-------------APHYQMIVALVAIIILLLTKP 278

Query: 337 HSLLRLRTP 345
             +   +  
Sbjct: 279 SGIFGKQKE 287


>gi|258510710|ref|YP_003184144.1| inner-membrane translocator [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257477436|gb|ACV57755.1| inner-membrane translocator [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 337

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/314 (10%), Positives = 82/314 (26%), Gaps = 24/314 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +   +  L ++      +      S + + +     L     A  +++V+   G + L+ 
Sbjct: 10  WSLAIAGLLILEIGFFGVLSPDFVSPQNLLASTENFLPVGFMALSMTLVI-ITGGIDLSV 68

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               ++      +L           +    + +    +   L                  
Sbjct: 69  GSMMSLCGVVMGLLWQHGVNIWLAALLSILLGALLGFINGQLIVRT-------------- 114

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            I   I         G   + +  +                  +      I + +  +  
Sbjct: 115 GIQPLIATLATLFIYGSLAMVLVGQGEGSIYGFPQSYLSLGTGTVLKWIPIQLIFYGVVA 174

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
           C     +    + T+       + +N+ A       +   K   + +S    G+A  F  
Sbjct: 175 CLFGFLL----KYTSYGRQVYFVGNNEGAALYSGLQVNRVKTITYVLSGCMSGVAAVFMG 230

Query: 251 ASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A    +  DM    E  ++ S ++      GG  ++      T +L  + +    +N   
Sbjct: 231 AYFASVRGDMGTNYELSVITSCLVGGVNVFGGSGTILGAFLGTFLLGVLQQGLNMLNVSS 290

Query: 306 FNSLLKFDCSFNMR 319
               +         
Sbjct: 291 VEQSVVTGAMLIAA 304


>gi|21225266|ref|NP_631045.1| ABC transporter membrane protein [Streptomyces coelicolor A3(2)]
 gi|7649625|emb|CAB88957.1| probable ABC transport protein, membrane component [Streptomyces
           coelicolor A3(2)]
          Length = 359

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/324 (12%), Positives = 98/324 (30%), Gaps = 13/324 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +  + L AV   +   +     +    + ++  Q     + A  +++++   G   
Sbjct: 37  LARPEVGVFLGAVAVFVFFLIAAPTLRDGGSMATVLYQSSTIGIMALPVALLM-IGGEFD 95

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A    A +  +L  +  +++W+ + V+ + S A G   G   +K       + TL
Sbjct: 96  LSAGVAVVTSALTAGMLSYQLTMNVWMGVVVALVASLAVGAFNGWVLVKTGLPSF-LVTL 154

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               + Q + +    +  G         +             F      V   +  + V 
Sbjct: 155 ATFLVLQGVNLAVTKLVTGNVATDDISDMDGFDQAKALFASSFDVGGVEVKITVVWWLVF 214

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +            RT   N    +  +Q++  ++   + F K++ F +        G 
Sbjct: 215 AALATWVLL------RTKYGNWIFAVGGSQESARAVGVPVTFTKITLFMLVGFGAWFVGM 268

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
               S + +        E I + + VI      GG  S         +   V +      
Sbjct: 269 HQLFSFNTVQSGEGVGQELIYIAAAVIGGCLLTGGYGSAIGPVFGAFMFGMVNQGIVFAG 328

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVI 326
           +                    + +
Sbjct: 329 WNPDWFKAFLGVMLLGAVLINLYV 352


>gi|307299818|ref|ZP_07579607.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306914539|gb|EFN44936.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 335

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/320 (11%), Positives = 102/320 (31%), Gaps = 23/320 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             K +  L L+ +V  L   +   +  +   +  M        + A G+ +VV   G + 
Sbjct: 15  FGKSEFYLLLVIIVVSLFFTILKPSFLTSTNLYGMVESNSFLAIMAAGV-LVVLISGGID 73

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++      +  Y    +   +G +++L   +  ++  A G++  L     +   + +   
Sbjct: 74  ISFTAIATVAQYIMATIVINWGGNMFLAFAIGGVVGIALGLVNALLIYFLKTPPIIVTIA 133

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            M+  +  ++                  +          + F             +   +
Sbjct: 134 TMNLFYGLLIF-----------------ISGGTWIYGFPLWFMERNLVRFGDSPGITIPI 176

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +        L L+ TA+      +  NQ+A   +  +++  +L  +       G+A  
Sbjct: 177 LVLVLSFILTWLILKYTALGRNIYAVGGNQEAARRVGISVLKTQLFVYCYMGFLAGIAST 236

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
             A     ++P+     E  ++ ++V     + GG  S+        +++ V      + 
Sbjct: 237 VQANMMLTVAPNALMGRELEVLAAVVLGGASLAGGTGSILGTVLGFGLIVIVQNGLTLLG 296

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              +   +       +  + 
Sbjct: 297 ISSYWHKVFVGAIIVISVSI 316


>gi|302386293|ref|YP_003822115.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
 gi|302196921|gb|ADL04492.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
          Length = 335

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/330 (13%), Positives = 97/330 (29%), Gaps = 23/330 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            +F++R       + L  +V  ++  +      S K + ++  QI   ++   G S V+ 
Sbjct: 11  RLFAVRGMGQVVTVGLGLIVMCIVFGIINPTFFSGKNVANLLRQIAPILLIGIGQSYVL- 69

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G + L+      +       + ++     W  + ++ +     G++ GL   K +   
Sbjct: 70  ITGNIDLSIGSVVGMSCMISATMMTKGMN-PWAAVLLTLLCCLIVGIVNGLLVAKCKLPP 128

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                          L            +        +G   +    FF +     +Y  
Sbjct: 129 FIAT-----------LGTMTIARGIAQIVNNNYNTDAIGDAAKGFRNFFYYGKIAGVYNT 177

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +  ++L + F          +T        I  N +A       I+     A+ VS+  
Sbjct: 178 VIISIVLWLVFNFLL-----SKTRTGRHIYAIGSNIEASKLSGVNIVATTTKAYLVSAFC 232

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
             + G    A+    + D     E   V + VI     LGG   L       +I   +  
Sbjct: 233 SCIVGLVICATSGMGTMDAGNAYEMYAVAASVIGGVSTLGGQGILIGTVIGASIWGVLQN 292

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
                        +       +     +++
Sbjct: 293 GLQFAGAPVAIRNIVIGAIVVISVLIDVIV 322


>gi|288962130|ref|YP_003452425.1| inner-membrane translocator [Azospirillum sp. B510]
 gi|288914396|dbj|BAI75881.1| inner-membrane translocator [Azospirillum sp. B510]
          Length = 289

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 86/299 (28%), Gaps = 25/299 (8%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           +I  + + GLS+ +G + +++L       +G Y         GL     + V+  ++   
Sbjct: 16  MILFIISVGLSVTLGLMRVVNLAHGAFAMVGGYVASYAAQVAGLPYAAALVVAVALTVLA 75

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
            + +           L       +     +L+         AGI            +  L
Sbjct: 76  TLPLERL--------LYRRIYGAANELSQVLLTIGLTFVIVAGINSLFGPTLKRIPLPEL 127

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
           +                 +V+         +   L RT      R   D+     +L   
Sbjct: 128 LTGT-VALGPKAIPAHRAFVIGAGAATLLGLWWLLERTDFGIRLRAAVDDPAMAAALGIR 186

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
                L+ FA+ +    + G   A          +     ++ +++V +GG  S+   A 
Sbjct: 187 TERLYLATFALGTGLAALGGVLGAELLPL--EPYYAIRYIVLFLAVVAVGGAGSIFGSAA 244

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
           A   L  +      +   +                     AL L++    H   + RT 
Sbjct: 245 AALALGIIDSAGKYLIPNFGE--------------FFFYAALILILFRWPHGFFKGRTA 289


>gi|312111905|ref|YP_003990221.1| inner-membrane translocator [Geobacillus sp. Y4.1MC1]
 gi|311217006|gb|ADP75610.1| inner-membrane translocator [Geobacillus sp. Y4.1MC1]
          Length = 336

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 95/312 (30%), Gaps = 13/312 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  +V      + L    + +    +   I I  + A G++  +   G   L+     +
Sbjct: 27  LLAILVVIAYFGITLDRFFTYENFSDILRSISIVTLVAIGITFSLIVDG-FDLSVGSTVS 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   +       Y   I + + V  ++  A G++  L  +K +   L +ATL        
Sbjct: 86  LATIASAAALVLYRQEILVTLLVPLLLGIAVGLLNSLLIVKLKLPDL-LATLATMYAING 144

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + +        G  + + +               F        + + + +L M  +  
Sbjct: 145 VQLTYTK------GFSIYNDMPLPDGGTAPGKFIPSFLFIGQGEVLGIPFSVLLMLVVVI 198

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +  L+L  T     +    +N++A       +   +  A+ +S  F  + G   A+    
Sbjct: 199 ATHLFLTYTKPGRLFYMTGENREAARLSGIPVNRYRTYAYVISGFFAALGGIVLASRIGT 258

Query: 256 ISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                        V +      V   G  ++      + ++  ++     MN  Y+   +
Sbjct: 259 GQVSAGASFLMDGVAAAYIGFSVFGAGKPNVIGTLFGSILMGVLLNGLTMMNVPYYAQDI 318

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 319 IKGAILVGALAL 330


>gi|241203458|ref|YP_002974554.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857348|gb|ACS55015.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 310

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 88/313 (28%), Gaps = 25/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +V  +   L      +   I ++  Q+ +Y +   G++ V+     + L+     
Sbjct: 10  LAGALIVLIIAASLISPHFLNPINILNVLRQVALYGILGIGMTFVI-LTKGIDLSVGSIV 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+   +  +L  +      +++   ++ +    +     S      ++     ++     
Sbjct: 69  ALVGVTGAVLMEQGVPIPLMVLICLSIGALVGCVNGLGISYFRIPAFIMTLGCMVMVRGF 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++I                     G TV        F      Y + +   +     + 
Sbjct: 129 ALMIA-------------------DGGTVNPGKLADSFFVLGGGYMLGVPTPIYVFAAVC 169

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L  T    A   +  N++A       +     S + +      ++G  F +   
Sbjct: 170 IIAAVVLSFTQFGRAIYAVGSNEEAARLSGINVPLVIFSVYIICGVLAALSGLIFLSRLS 229

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E   +   VI      GG  ++        +L  +  +        F+  
Sbjct: 230 VGDPNSGLGLELEAITIAVIGGTSLFGGEGTVLGTIGGAMVLAIIANILNLAGVSPFSQQ 289

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 290 VVKGAIIVLAVLL 302


>gi|328545565|ref|YP_004305674.1| ABC transporter permease II ( substrates branched-chain/neutral
           amino acids) 2 [polymorphum gilvum SL003B-26A1]
 gi|326415307|gb|ADZ72370.1| ABC-type transport system permease protein II (Probable substrates
           branched-chain/neutral amino acids) 2 [Polymorphum
           gilvum SL003B-26A1]
          Length = 312

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 56/305 (18%), Positives = 105/305 (34%), Gaps = 26/305 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 Y  ++G+ I +Y + A   ++  G    +SL     + +GAY   +        
Sbjct: 25  PWMIGPYGLTIGVTIAMYTVLATSWALFSGPTHYISLATAAFFGVGAYVTGLGIDALPY- 83

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            WLL+P++ +       ++GL +LK  G Y  I TL ++E  + ++   + I+       
Sbjct: 84  -WLLLPLAGLAGAVMAALIGLTTLKLSGVYFVIFTLGLAEFIRQLITWGQNISG------ 136

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                                     I E  +Y+ L+ +  L   +   + R+ +  A R
Sbjct: 137 -----------------TKGIYVLTSITEKHIYWQLMALAALVWLLGWLIARSRLGFALR 179

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD-MFKFSENIIVI 270
            I D+++           AK+  F +  A   +AGA  A     + P   F    +  V+
Sbjct: 180 IIGDDEQVARHSGINTARAKILLFMLPGAVAAIAGAIMAPRYVYLEPALAFTPMLSFQVV 239

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            + +LGG   L            + E            LL       +       + L  
Sbjct: 240 IMALLGGTGRLWGPLVGVIPFTFLWEAISISFPNQTTLLLGVCFLVIVYLLPKGFVGLID 299

Query: 331 VILMR 335
           ++  R
Sbjct: 300 MVRRR 304


>gi|323690993|ref|ZP_08105279.1| inner-membrane translocator [Clostridium symbiosum WAL-14673]
 gi|323504932|gb|EGB20708.1| inner-membrane translocator [Clostridium symbiosum WAL-14673]
          Length = 325

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 91/311 (29%), Gaps = 25/311 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  ++  ++  +   +  S   + +  +Q  I  + A G+S+V+ S G++ L+   + A+
Sbjct: 26  LSFILLMIVAVIINPSFLSVTNLTNQFVQGAIVGICAMGMSLVI-SAGMIDLSVGSSVAL 84

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
            +   V L ++       L+           +     +                    NI
Sbjct: 85  ISGLGVSLLNKTHSITLCLLFCLGFGLLLGLINGIFITKG------------------NI 126

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                 +    A   +  +L   G        +  F          + ++++    ++  
Sbjct: 127 APFIVTLATFSAYRSIITQLGQGGPFTVDKSMYDAFRYVASGKIFGIPHLMIIFILITLL 186

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               + +T        +  NQ+A       +   K   +  +    G+A    A+    I
Sbjct: 187 TGFIMAKTKFGRYVYAVGSNQQAARLTGIKVGNVKTMIYCYAGILYGLAAFLLASRLTSI 246

Query: 257 SPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                     +  I+ V +      GG   +        +L  +  +    N   F + L
Sbjct: 247 QAASAGDGYEMDAIAAVAIGGTAMEGGRGKIIGTFLGVLMLRIIQTILVMANVPPFLNGL 306

Query: 311 KFDCSFNMRHT 321
                  +   
Sbjct: 307 VRGLVIIVAVL 317


>gi|170696079|ref|ZP_02887215.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
 gi|170138982|gb|EDT07174.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
          Length = 400

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/349 (13%), Positives = 104/349 (29%), Gaps = 39/349 (11%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L  +A+V+    FL  G   S + + ++  Q  I  M A G+ +VV + G + L+  
Sbjct: 39  AGLLVAVALVWIAFSFLTDGVFVSDRNVTNLMRQTAITAMVALGM-LVVVAQGEIDLSVG 97

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIM--GLPSLKFRGDYLAIATLIM 129
              ++      +L + + +S W+ +  +  +    G+     +           +  L++
Sbjct: 98  SFMSLCVTVVALLEASHLVSPWVTVAAAIGMGVLVGVWNGTWVARFGLPSFVATLGGLML 157

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF-------------------- 169
                  L   + I+    GI      +  G  +   +                      
Sbjct: 158 FRGIALALSGGRTISGISEGIRFFGDAFLSGPVLWVFLAIAALISLLPLRQLKDPGRRRQ 217

Query: 170 -----------FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                          S   +  + +   +      +A +   L  T        +  N+ 
Sbjct: 218 ALVRAALGFASVALLSWSTLSYLGLPMPVAITLVAAAILSWMLTNTVWGRHVYAVGGNRA 277

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI---- 274
           A  S    I    +++F +     G+    F        P+   F E   + ++VI    
Sbjct: 278 AARSAGIPITRHLMTSFILIGVLTGLGTLMFVGRLGSAPPESGLFLELNAIAAVVIGGAS 337

Query: 275 -LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
             GG  ++  I     ++  +      +N       +       +    
Sbjct: 338 LYGGTGTVPGILLGALLMQSLSNGLSLLNVPTAYQNIVSGIVLMLAVYV 386


>gi|327394379|dbj|BAK11801.1| ribose transport system permease protein RbsC [Pantoea ananatis
           AJ13355]
          Length = 350

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 98/319 (30%), Gaps = 26/319 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + ++ V   L+  +F    + Q ++ +      + +Q+ I  + A G++ V+ + G + L
Sbjct: 38  IFVVMVGIALIFEIFGWYVRDQSFLMNTNRLILIVLQVAIIGIIAVGVTQVIITTG-IDL 96

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+ A     L                 ++     ++ +P+       + +  L 
Sbjct: 97  SSGSVIALTAVVAASLAQTSDT-----------LTPMFPSLVNMPAAVPIAAGIGVGLLC 145

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                  I     P      G+ V+ R      T  + I F     + +        + L
Sbjct: 146 GLINGVLITRTGIPPFIATLGMMVSARGLAQYYTQGNPISFLSDGFTSIGQGAMPVVIFL 205

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +        + L+ T        I  N  +       +    +  + ++ A  G+AG  
Sbjct: 206 VVA---LVFHVALKHTRYGKYVYAIGGNMTSAKVSGINVNKYLIMVYTIAGALSGLAGVV 262

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            AA        M    E   + + VI     +GG+  ++       IL  +      +  
Sbjct: 263 LAARVSSGQSSMGVGYELDAIAAAVIGGSSLMGGVGRITGTLIGAVILGLIKSGFTFVGV 322

Query: 304 YYFNSLLKFDCSFNMRHTT 322
             +   +          T 
Sbjct: 323 DAYIQDIIKGIIIVAAVTI 341


>gi|316935098|ref|YP_004110080.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315602812|gb|ADU45347.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 292

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 84/290 (28%), Gaps = 22/290 (7%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+++ G + + +        +  Y    L   + +   L  P+        G ++ 
Sbjct: 23  VAVGLALIFGLMDVTNFAHGEFLMLAMYITFFLFVFFAIDPILAAPLVGAAMFLFGAVIY 82

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           L  ++F       A    + I    +     +     G+          +   S +    
Sbjct: 83  LLVVRF-------AMRAKANIGMVQIFTTFGLAILMRGLAQYFFTPDYRSINVSWLGGKT 135

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                V   +      L       ++  ++++T    A    R++  A   +        
Sbjct: 136 IEIGGVFLPVPQLVGALVSIAAFGALYFFMKKTDFGRALEATREDAGAVALVGIDKNKVF 195

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              + + SA IG+AGA  A             S  +I    V LGG  S+        I+
Sbjct: 196 ALGWGLGSALIGLAGAVMAVFFYI--YPDVGASFALIAYVTVALGGFGSVFGAFAGGIIV 253

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             V      +      S+              +     LV+ +R   L  
Sbjct: 254 GLVEATTAMILPPSLKSIG-------------IYAVYLLVVFIRPRGLFG 290


>gi|238790035|ref|ZP_04633813.1| Autoinducer 2 import system permease protein lsrC [Yersinia
           frederiksenii ATCC 33641]
 gi|238721848|gb|EEQ13510.1| Autoinducer 2 import system permease protein lsrC [Yersinia
           frederiksenii ATCC 33641]
          Length = 337

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 84/296 (28%), Gaps = 31/296 (10%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      S +    +     I ++ A G ++V+     + ++      + A +  +    
Sbjct: 1   MIDSNYFSLQTFTMIFSSAQILILLAIGATMVM-LTRNIDVSVGSITGLCAVTVGM-ALN 58

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA--TLIMSEIFQNILIKWKPITN 145
            G  + L    + ++    G   G+     R   +     TL +      +L   K I  
Sbjct: 59  AGFGLALSCLFALLVGMLAGFFNGILVTWLRIPAIVATLGTLGLYRGLMLLLTGGKWIEG 118

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
             A +           +    +      +  ++                        +TA
Sbjct: 119 LPADLKSLSTPILFSISPIGWLIMLLIIAMALLLG----------------------KTA 156

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
              +     DN +    L       ++ AF+++     +AG  FA+    I        E
Sbjct: 157 FGRSIYATGDNLQGARQLGIRTDSIRIFAFSMNGVMAALAGIVFASQIGFIPNQTGNGLE 216

Query: 266 NIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
              + + V     +LGG  ++        +L  +  +   +    + +        
Sbjct: 217 MKAIAACVLGGISLLGGTGTIIGAILGAYLLTQIDSVLVLLRLPAWWNDFIAGLVL 272


>gi|167772412|ref|ZP_02444465.1| hypothetical protein ANACOL_03789 [Anaerotruncus colihominis DSM
           17241]
 gi|167665515|gb|EDS09645.1| hypothetical protein ANACOL_03789 [Anaerotruncus colihominis DSM
           17241]
          Length = 331

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/317 (12%), Positives = 84/317 (26%), Gaps = 23/317 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  L+      +  S K + ++  QI   ++   G S ++   G + L+     
Sbjct: 12  VTIGLIILCLVFGAMNPSFFSGKNMGNLLRQIAPTLIIGIGQSYIL-ITGNIDLSIGSVV 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       + ++     W+   ++       G + G    +++          M     
Sbjct: 71  GMSCMISATMMTKGVN-PWVAALITLACCLLIGFVNGELVARYKLPPFIATLGTMQIARG 129

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              I          G   A    F                        +Y  +     + 
Sbjct: 130 IAQIANNNYNTDSIGDAAAGFRDFFYY----------------GKLFGLYNTIWIAIVIW 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT        I  N +A       +I     A+ VS+    + G    A+  
Sbjct: 174 LVFNFILSRTRTGRHIYAIGSNVEASKLSGVNVISTTNKAYLVSAFCACVVGLIICATSG 233

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + D     E   V + VI     LGG   L       AI   +      +        
Sbjct: 234 MGTMDAGNTYEMYAVAASVIGGVSPLGGQGILLGTVIGAAIWGVLQNGLQFIGAPVAIRN 293

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     + +
Sbjct: 294 ILIGVIVVLSVLLDVFL 310


>gi|194337050|ref|YP_002018844.1| inner-membrane translocator [Pelodictyon phaeoclathratiforme BU-1]
 gi|194309527|gb|ACF44227.1| inner-membrane translocator [Pelodictyon phaeoclathratiforme BU-1]
          Length = 294

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 95/305 (31%), Gaps = 28/305 (9%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           ++ +   IY++ +   SI+  S+           ++GAY       +  L +++ IP + 
Sbjct: 10  NILVSFSIYLLISTSFSIIYNSVKFFHFAHGAIISLGAYFSYFFYLQLNLPLFIAIPFTV 69

Query: 101 MISGACGMIMGLPSLKF--RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            +S    +++ L   +   R    +++ LI+S     +L     +               
Sbjct: 70  FLSIFVSLLIELLIYRPLKRRKVSSLSLLIVSLGIYIVLQNVISLIW-----------SD 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              ++                       +   C +    +L+L+   I    R I  N +
Sbjct: 119 GVKSIVKNEIETGTEIFGAHITNIQIVTIGLSCIIFLIKMLFLQFHKIGRNIRAISTNTE 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +        L +FA+ S    + G   AA           FS  +  + ++I+ G+
Sbjct: 179 LANIMGINSNRIILWSFAIGSGIASIIGVLVAADTGL--TPTMGFSLLLYGVVVMIISGI 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S   +     +L  +  L        +   + +               L L ++ +   
Sbjct: 237 GSNWGLIGGALLLATIQHLTAFFLDGKWIDAITYS-------------ILILFLIWKPLG 283

Query: 339 LLRLR 343
               R
Sbjct: 284 FSGKR 288


>gi|254707737|ref|ZP_05169565.1| monosaccharide-transporting ATPase [Brucella pinnipedialis
           M163/99/10]
 gi|261315229|ref|ZP_05954426.1| monosaccharide-transporting ATPase [Brucella pinnipedialis
           M163/99/10]
 gi|261304255|gb|EEY07752.1| monosaccharide-transporting ATPase [Brucella pinnipedialis
           M163/99/10]
          Length = 333

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 87/301 (28%), Gaps = 17/301 (5%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      S   + ++  +     + A G + V+ S G L L+     A  A   ++  + 
Sbjct: 38  IANPNFISIDNLLNVATRSAFIAIIALGATYVI-SSGGLDLSVGAMVAFVASIMILFMNS 96

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             ++  +L+ ++A++                     I   I +     I           
Sbjct: 97  GMIADPVLMLIAAVMLALVVGAACGQLNGIITTVGGIEPFIATLGTMGIYRGLTTW---- 152

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                         T+R+      +  ++    + +   ++ +   +A     L RT   
Sbjct: 153 -------LSQGGAITLRNPEIQSLYRPAYFGSVLGVPVPVIVIFVTAALAAFVLYRTRYG 205

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N+        ++   +  AF +    + +A   +       S       E  
Sbjct: 206 RHIIAVGSNEDVARYSGISVKKVRTIAFVIQGLCVAVAVLLYVPRLGSTSATTGLMWELQ 265

Query: 268 IVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V+      GG+  +        IL  +  +    +F     L     +  +    
Sbjct: 266 AITAVVVGGTALRGGVGRIWGTICGAFILEIIGNIMLLSSFVSEYLLGAIQGAIIIIAML 325

Query: 323 L 323
           +
Sbjct: 326 V 326


>gi|229824534|ref|ZP_04450603.1| hypothetical protein GCWU000282_01878 [Catonella morbi ATCC 51271]
 gi|229785905|gb|EEP22019.1| hypothetical protein GCWU000282_01878 [Catonella morbi ATCC 51271]
          Length = 344

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/295 (12%), Positives = 88/295 (29%), Gaps = 9/295 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++      ++     +  S K   ++  Q    ++ A G + ++  LG   L+     
Sbjct: 23  LYIVLAALIAIIISMDTSFVSPKNFINILAQASTRIIMACGAAGLI-ILGGTDLSAGRVL 81

Query: 75  AIGAYSYV--ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            + +      +  + Y   ++  +P   +      +I+             +A L +   
Sbjct: 82  GLTSLIAASLLQSTTYASRMYPDLPQLPLWLPLIIVIVVGGIFGLING-FGVAILKVHAF 140

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
              +  +                            R     +     +I + YV+     
Sbjct: 141 IITLGTQLVAYGIALIYQQQQAGGAQPIANFDDRYRNLVNGTVNFTKDIQIPYVVFYAIV 200

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +   + +   +T +      I  N +A       I+   L  F +S    G+AG   AA 
Sbjct: 201 VCVIMWIIWNKTQLGKNMYAIGGNIEAAEVSGVNIVKNILIIFLISGILYGLAGYLEAAR 260

Query: 253 RDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
               + +     +   + + VI      GG+ ++  +     IL  +      + 
Sbjct: 261 VGSTTSNTGLNYDLDAISASVIGGVSFSGGIGTIPGVIIGAIILQFINYGLAYVG 315


>gi|297203616|ref|ZP_06921013.1| ABC transporter integral membrane protein [Streptomyces sviceus
           ATCC 29083]
 gi|197716080|gb|EDY60114.1| ABC transporter integral membrane protein [Streptomyces sviceus
           ATCC 29083]
          Length = 339

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/272 (12%), Positives = 82/272 (30%), Gaps = 25/272 (9%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
               + +  +  Q  +  +   G++ V+ + G + L+     A+ A  +    +      
Sbjct: 57  FLDTRNLQLVLTQASVIGVVTVGMTFVI-TSGGIDLSVGAIVAL-ASVWATTVATQEYGF 114

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
             ++  + ++   CG++ GL            ATL M    + + ++             
Sbjct: 115 AGILFTAVIVGVGCGLVNGLLIAYGAMVPFI-ATLAMLASARGLALQITD---------- 163

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                  G+T    +           Y + +  ++L    ++    L L RT        
Sbjct: 164 -------GSTQVVTVNSVLDLGERDAYVLGIPPLVLVFAVVTIIGWLVLNRTTFGRRTVA 216

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +  N +A       +   +L  + +S    G+A                   E   + + 
Sbjct: 217 VGGNAEAARLAGIDVRRQRLYLYLLSGLCCGIAAFLLIILSGSGQNTNGNLYELDAIAAA 276

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCC 299
           +I      GG  +++       I   +  +  
Sbjct: 277 IIGGTLLSGGRGTITGSVLGVLIFTTITNIFA 308


>gi|170696127|ref|ZP_02887262.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
 gi|170138942|gb|EDT07135.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
          Length = 359

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 87/303 (28%), Gaps = 14/303 (4%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            A  +   + S+   + I  +   G+++ +   G   L+     A    +   +   +  
Sbjct: 58  PAFLNIDNLFSILQSVSIVALLGIGVTVTLA-AGGFDLSVGSVAASAQMAASYVLIVWHG 116

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           +    +    ++    G+  GL   + R     +ATL    +   + +      +   G 
Sbjct: 117 NTLAAVAACLVLGVLAGLFNGLLITRLR-VPDQLATLGTLFLLAGLQLIPTGGRSLATGT 175

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            + D     G    + +   R     V+    +   +L          + +  T      
Sbjct: 176 ILPDGTETTGVFPDAFLALGRLRLFDVVPLPVIVLAVLT-----VVACVLMESTRWGRVI 230

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N+ A           +++A+ VS A   + G   AA   R        S  +  +
Sbjct: 231 YAIGGNETAARLAGAPTARYRIAAYVVSGAIASLGGVLIAARVGR-GDVSAGHSMLLDAV 289

Query: 271 SIVILG------GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
           +  ++G         ++         +  ++     +N  Y+                  
Sbjct: 290 AASLVGYAVWGAKRPNVFGTVVGAVFVGVLLNGLTMLNAPYYMQDFIKGVLLVGALAFTF 349

Query: 325 VIA 327
            + 
Sbjct: 350 SVG 352


>gi|114766294|ref|ZP_01445281.1| ABC branched amino acid transporter family, inner membrane subunit
           [Pelagibaca bermudensis HTCC2601]
 gi|114541495|gb|EAU44540.1| ABC branched amino acid transporter family, inner membrane subunit
           [Roseovarius sp. HTCC2601]
          Length = 317

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 101/301 (33%), Gaps = 16/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y + A G  ++  S  + +    I     A + V L +    +   ++   A++
Sbjct: 28  LVSGILYALIALGFVLIFRSSRIFNFAQGIMVVFAALTLVGLHAMGVPAWICVLLTLAVM 87

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
            G    I  +      G    I  +    I   ++   + I  G+  + + + L     +
Sbjct: 88  FGLAVTIERVVLRPLVGQPDIILFMATIGITLFLIGLGEIIFGGENKVMITEELGIPTDS 147

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           V             +I E      ++    L  +++ +L +T +  A R + D+ +A  S
Sbjct: 148 VVLEPW-----GGLLILEQKDITAVIVAALLVVALLAFLNKTRMGRAIRALGDDHQAALS 202

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +  ++    +  + ++     + G  + A                  + +++LGG+ S++
Sbjct: 203 VGISLQQIWVLVWFIAGIIALVTGIAWGAR---AGVSFALEVIAYKALPVLMLGGLESIT 259

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  ++  + +L                       T    +   +V+L R   L   
Sbjct: 260 GAIVGGLMIGMLEKLFEIY--------WGQPLLGGNTETWFAFVLALIVLLFRPQGLFGE 311

Query: 343 R 343
           R
Sbjct: 312 R 312


>gi|84684273|ref|ZP_01012175.1| possible ABC transport system permease protein [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84668026|gb|EAQ14494.1| possible ABC transport system permease protein [Rhodobacterales
           bacterium HTCC2654]
          Length = 310

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/315 (15%), Positives = 113/315 (35%), Gaps = 22/315 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M + GL+++   +G+L+      Y +GAY           S W+ + +
Sbjct: 8   LLNGVSYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFA--FTITGSTSFWIALFI 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  G ++    L+       +A L+ +     ++ +   I  G            
Sbjct: 66  APVLVGLVGALVERYGLRKVHANGHVAELLFTFGLAYLIEEVVKIVYG---------KTA 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   V  L+ F  F      +  +  +V+     +   +   L+RT      +    +  
Sbjct: 117 VDYRVPDLLNFAAFEIYGATFPAYRIFVIFIAIAMLVGLWFLLKRTRAGLIIQAALTHPH 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   + F  ++ F +  A  G+AG         ++          IV  +V++GG+
Sbjct: 177 MVGHLGHNVPFIFMTVFGIGCALAGLAGLMAG--NIFVTDPAMAVQMGPIVFVVVVVGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYF---------NSLLKFDCSFNMRHTTLMVIALF 329
            SL     A+ ++  +     G+N  +           +    D + +     L  + L 
Sbjct: 235 GSLEGAFLASLLIGLLQNFAVGINASFAEIFAFTGLSPTSEVGDITISSLAPVLPFLLLV 294

Query: 330 LVILMRSHSLLRLRT 344
           L+++ R   L+  + 
Sbjct: 295 LMLIFRPQGLMGEQE 309


>gi|295108775|emb|CBL22728.1| Ribose/xylose/arabinose/galactoside ABC-type transport systems,
           permease components [Ruminococcus obeum A2-162]
          Length = 335

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 85/292 (29%), Gaps = 24/292 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    +   ++L +   +  +     ++   I      A G+ + +  LG + L      
Sbjct: 29  ILGAFIALCVVLTIATDSFMTLNNWLTILRTISTTGFLALGVMLTI-MLGGIDLIAGAMI 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A      V+   R+G+ + + I +  ++    G I G                       
Sbjct: 88  ACSGCLVVVCMERFGIPMIVAIIIGLVLGLIVGAINGTIIAYAGIHPFV----------- 136

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +  + I  G A +    +   L +               V Y I    +   + ++ 
Sbjct: 137 -VTLAMQSILRGAAYLIANGQPVPLYSNTTFPKIGTGLAFGVVPYPIIYMLIFFFLQYML 195

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                   +T +      +  N+ A       I   K+  + +S      AG   +A   
Sbjct: 196 L------NKTKLGRYIYAVGGNETAAQFSGINIKKVKIIVWTISGFLASFAGIVLSARLA 249

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
              P     +E   +   V     + GG+ +   +     ++  +      M
Sbjct: 250 SGQPSTSIGAETDAIAGCVLGGTSMYGGVGNTGGVLIGIMVIGVISNGLTLM 301


>gi|217969799|ref|YP_002355033.1| inner-membrane translocator [Thauera sp. MZ1T]
 gi|217507126|gb|ACK54137.1| inner-membrane translocator [Thauera sp. MZ1T]
          Length = 293

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 105/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              + +      +    I    Y + + GL+I+ G L +++      Y +GA+   I  +
Sbjct: 3   IFGVPSALLGSQLLVGLINGSFYAILSLGLAIIFGLLNIINFTHGAQYMMGAFVAWIALN 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
           + G++ W+ +  + ++ GA G+++    L+       +  L+++     I         G
Sbjct: 63  KLGINYWVALLFAPIVIGALGVLIERTMLRKLYKLDHLYGLLLTFGLALIFEGIFRDQYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G                 +        F+   I+  +V++    +  +    + +T +
Sbjct: 123 ISGQSYPVP----------ELLQGGVNLGFMFLPIYRGWVVVAALTVCFATWFVIEKTKL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N +   +L   +       +    A    AG   A         +   +  
Sbjct: 173 GAYLRAGTENAQMVQALGINVPLLITFTYGFGVALAAFAGVLAAPVYQV--SPLMGSNLI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+                                  +      ++ +
Sbjct: 231 IVVFAVVVIGGMGSIM--------------GSILTGLGLGLIEGLTRVFYPEASAVVVFV 276

Query: 327 ALFLVILMRSHSLLR 341
            + +V+L+R   L  
Sbjct: 277 IMVIVLLVRPAGLFG 291


>gi|170693192|ref|ZP_02884352.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
 gi|170141722|gb|EDT09890.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
          Length = 333

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/315 (10%), Positives = 88/315 (27%), Gaps = 22/315 (6%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
             L    V+  + L +      +   + ++ +Q+ +  + A G + V+ + G + L+   
Sbjct: 27  GPLFAALVLICIALSIASPEFLTTSTLTNIMVQVSVVGIAAVGGTFVIITSG-IDLSVGS 85

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
             A+       + +       + + ++ +                   +L +   I++  
Sbjct: 86  LVALTGMVAATVMA-GSTPGAVGLGIAGLCVALAVGAAAGALNGLAVAWLRLVPFIVTLA 144

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
              +                      +            F +        +   ++ M  
Sbjct: 145 MMAMARGLT---------------LAISDGRTKFDFPNAFTAFGAKTVAGLPMPMIVMLV 189

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           + A   + LR+T   +    +  NQ+A       +       + ++     +AG   A  
Sbjct: 190 IFAIGHVLLRKTTFGHQVFAVGGNQEAARLAGIPVHRVVFLTYMLAGVTAAIAGIVLAGR 249

Query: 253 RDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +   P      E  ++ ++VI      GG  S+        ++  +      +    F 
Sbjct: 250 LNSALPSAANGLELQVIAAVVIGGTSLAGGRGSIVGTFIGVVLIGVINVGLSLLGVNPFW 309

Query: 308 SLLKFDCSFNMRHTT 322
           +              
Sbjct: 310 TQFIQGGVIFAAVLL 324


>gi|70725179|ref|YP_252093.1| ribose ABC transporter permease [Staphylococcus haemolyticus
           JCSC1435]
 gi|68445903|dbj|BAE03487.1| ribose ABC transporter permease [Staphylococcus haemolyticus
           JCSC1435]
          Length = 312

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/315 (13%), Positives = 103/315 (32%), Gaps = 25/315 (7%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I  +  ++  +++ +   +      + ++  QI I  + A+G++ ++   G + L+   
Sbjct: 14  IIPFIGLILLIIVVSILNPSFLDLSNLLNLLRQISINGLIAFGMTFII-LTGGIDLSVGS 72

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
             A+ +    ++ +   +   + + +  +I    G + GL   K        ATL    I
Sbjct: 73  ILALSSAFIALMITSG-VDPIIALIIGVLIGFVLGAVNGLLVTKGNMAPFI-ATLATMTI 130

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
           F+ + +                     G  + +L   + F      Y I +    + M  
Sbjct: 131 FRGLTLVITD-----------------GNPITNLGDSYLFQLFGKGYFIGIPVPAVTMII 173

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +   +++ L++T        I  N+ A       +   K+  + +S     +AG    + 
Sbjct: 174 VFVILLIILQKTTFGRHTYAIGGNEVAAKISGIKVNKIKILIYGISGLMSALAGGILTSR 233

Query: 253 RDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +   P      E   + ++V     + GG   +        I+  +      +    F 
Sbjct: 234 LNSAQPTAGTSYELDAIAAVVLGGTSLTGGKGRIVGTLIGVLIIGVLNNGLNLLGVSSFY 293

Query: 308 SLLKFDCSFNMRHTT 322
             +       +    
Sbjct: 294 QQVVKGVVILIAVLI 308


>gi|332289961|ref|YP_004420813.1| beta-methylgalactoside transporter inner membrane component
           [Gallibacterium anatis UMN179]
 gi|330432857|gb|AEC17916.1| beta-methylgalactoside transporter inner membrane component
           [Gallibacterium anatis UMN179]
          Length = 336

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/313 (9%), Positives = 89/313 (28%), Gaps = 8/313 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   ++        S     ++  Q  + ++ A G++ ++ + G   L+     
Sbjct: 18  IYFVLLILLGVIVSQDDTFLSLLNFSNILTQSSVRLIIALGMAGILITQG-TDLSAGRQV 76

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     +      +  +   ++ M      +I+             I   +    F 
Sbjct: 77  GLAAVVSATMLQALDNTNRVFPDLAEMPIPVVILIVCAIGAVIGMINGLIVAYLNVTPFI 136

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L     +    +  Y A     +    +S   F +       + +    +   +    
Sbjct: 137 ATLGTMIIVYGANSLYYDAVGSSPIAGFSKSFSEFTQGFFQLGDFRLSYITIYAAIAAFF 196

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             ++    +T        I  N +A       +    +  + ++ AF G AG        
Sbjct: 197 VWVVWN--KTRFGKNMFAIGGNPEAARVSGVNVARNLIFVYVLAGAFYGFAGMLEGGRIG 254

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + + V+      GG+ ++  +     I   +      +    +   
Sbjct: 255 SATNNLGFMYELDAIAACVVGGVSFAGGVGTVIGVITGVIIFTVINYGLTYIGVNPYWQY 314

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 315 IIKGTIIILAVAI 327


>gi|254504053|ref|ZP_05116204.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
 gi|222440124|gb|EEE46803.1| putative amino acid or sugar ABC transport system, permease protein
           [Labrenzia alexandrii DFL-11]
          Length = 290

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 85/308 (27%), Gaps = 27/308 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ S      +Y + A G +I+  +  +++        +G    V             I
Sbjct: 6   QFVFSGLTVGAVYALVALGFTIIYNASDVVNFAQGEFVMLGGMITVFAFDAGLPLPLAAI 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                 +     +        RG  +    +I       I    + +             
Sbjct: 66  LAIVATAAIGVALNKFAIEPARGAPVVSLIIITIGASILIRGATQVL------------F 113

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + +                   +V+ G   +  ++ L+  RT +  A     +N
Sbjct: 114 DKQLHRLPAFSGDDPIHLLGATLLPQSLWVIGGAIAIFIALWLFFTRTLLGKAVLATANN 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +     F    +FA+S+A   +AG         +          +   +  +LG
Sbjct: 174 RLAAQLVGINTGFVMTLSFALSAAIGALAGVLVTP--ITLVSYDVGVGLALKGFAAAMLG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM +         +L     L  G     +   + F             + +  V+ +  
Sbjct: 232 GMGNPKGALVGGLLLGLFEALTAGYISSQYKEAVAF-------------VVILAVLFVMP 278

Query: 337 HSLLRLRT 344
             L   +T
Sbjct: 279 QGLFGQKT 286


>gi|51594902|ref|YP_069093.1| ABC sugar transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|186893904|ref|YP_001871016.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
 gi|81640484|sp|Q66EZ0|LSRC_YERPS RecName: Full=Autoinducer 2 import system permease protein lsrC;
           Short=AI-2 import system permease protein lsrC
 gi|209573021|sp|B2K3G0|LSRC_YERPB RecName: Full=Autoinducer 2 import system permease protein lsrC;
           Short=AI-2 import system permease protein lsrC
 gi|51588184|emb|CAH19791.1| ABC sugar transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|186696930|gb|ACC87559.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
          Length = 351

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/314 (12%), Positives = 91/314 (28%), Gaps = 27/314 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            N  +    L  +    LL +      S +    +     I ++ A G ++V+     + 
Sbjct: 6   QNNREGTALLAILTLFALLGIIDRNYFSLQTFTMIFSSAQILILLAIGATLVM-LTRNID 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++      + A +  +     G  +      + ++    G   G+     R         
Sbjct: 65  VSVGSITGLCAVTVGM-ALNAGFGLVASCLFALLVGMVAGFFNGILVTWLRIPA------ 117

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                    ++          G+ +          + + ++    P  F I  I    +L
Sbjct: 118 ---------IVATLGTLGLYRGLMLLLTGGKWIEGLPADLKSLSTPILFSISPIGWLTML 168

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +             TA   ++    DN +    L       ++ AF+++     +AG 
Sbjct: 169 LILSMAWLLG-----NTAFGRSFYATGDNLQGARQLGVRTDSIRIFAFSMNGVMAALAGI 223

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
            FA+    I        E   + + V     +LGG  ++        +L  +  +   + 
Sbjct: 224 VFASQIGFIPNQTGNGLEMKAIAACVLGGISLLGGTGTIIGAILGAFLLTQIDSVLVLLR 283

Query: 303 FYYFNSLLKFDCSF 316
              + +        
Sbjct: 284 LPAWWNDFIAGLVL 297


>gi|288960158|ref|YP_003450498.1| inner-membrane translocator [Azospirillum sp. B510]
 gi|288912466|dbj|BAI73954.1| inner-membrane translocator [Azospirillum sp. B510]
          Length = 290

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 80/304 (26%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G  +V+ +   ++         G    V L     L   +L+PV
Sbjct: 7   LVNGVALGAAYALVALGFVLVLNATSAVNFTQGDLVMAGGLLAVALAPLIPLPGIVLLPV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +  A G+++ L +          +  I +     IL     I  G            
Sbjct: 67  VLALMAALGLLLALAAYLPLRRRPPASVFISTIAVGIILQNGAAILFGPEPRAAPP---- 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   + F     S     I     +L              RT +    R    + +
Sbjct: 123 --LFGDGTLSFAGLAVSEQSLAIVAVAAVLIGSQQWVFA-----RTQLGRRLRATAQDPE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +    L  FA+ +A  G AG   A                  +   V +GG 
Sbjct: 176 MARACGVPVTAMILLTFAIGAACAGAAGLLLANRYFVTPASGGDLILKAYI--AVTVGGW 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++         +  Y                   + + L  ++++R   
Sbjct: 234 GSVPGAVVGALLIALFEVGVSSVLSY-------------PAALGALYLTLLAILVLRPQG 280

Query: 339 LLRL 342
           L   
Sbjct: 281 LFGE 284


>gi|66045806|ref|YP_235647.1| inner-membrane translocator [Pseudomonas syringae pv. syringae
           B728a]
 gi|63256513|gb|AAY37609.1| inner-membrane translocator [Pseudomonas syringae pv. syringae
           B728a]
 gi|330900364|gb|EGH31783.1| inner-membrane translocator [Pseudomonas syringae pv. japonica str.
           M301072PT]
 gi|330942814|gb|EGH45335.1| inner-membrane translocator [Pseudomonas syringae pv. pisi str.
           1704B]
 gi|330971169|gb|EGH71235.1| inner-membrane translocator [Pseudomonas syringae pv. aceris str.
           M302273PT]
 gi|330981259|gb|EGH79362.1| inner-membrane translocator [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 325

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/322 (12%), Positives = 88/322 (27%), Gaps = 27/322 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LRL+     L L+ ++  L+L        + +    +  Q  I  + A G++ V+     
Sbjct: 18  LRLSLDRFGLPLVFILLCLVLAFASEYFMTWRNWMDILRQTSINGILAVGMTYVI-LTKG 76

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A       ++ ++    +   +          G++ G              
Sbjct: 77  IDLSVGSILAFAGLCSALVATQGYG-LLAAVSAGMFAGAMLGVVNGFMVANLSIPPFVAT 135

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
             ++S                  G+          T +              I    + +
Sbjct: 136 LGMLSI---------------ARGMTFILNDGSPVTDLPEEYLALGIGRIGPIGVPIIIF 180

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            ++ + F         R T        +  N+K+  +    +     S + VS    G+A
Sbjct: 181 AVVALIFWMVL-----RYTTYGRYVYAVGGNEKSARTSGIGVRKVMFSVYVVSGLLAGLA 235

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G   +A      P      E   + ++VI      GG  S+        ++  +      
Sbjct: 236 GVVLSARTTSALPQAGMSYELDAIAAVVIGGTSLSGGTGSIVGTLFGALLIGVINNGLNL 295

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +    +   +            
Sbjct: 296 LGVSSYYQQVAKGLIIVFAVLI 317


>gi|148261194|ref|YP_001235321.1| inner-membrane translocator [Acidiphilium cryptum JF-5]
 gi|326404597|ref|YP_004284679.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|146402875|gb|ABQ31402.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidiphilium cryptum JF-5]
 gi|325051459|dbj|BAJ81797.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 293

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 86/299 (28%), Gaps = 23/299 (7%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           + +   GL++V G + +++L       +G +   +L     L+    IP++ +     G 
Sbjct: 18  FSLVGIGLNLVFGVMRMINLAHGQFIMLGGFGAWLLVHDLHLNPIFGIPLAILGGILIGY 77

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
            +    +           L          I +  I      + +        +   + + 
Sbjct: 78  PLYYGVVPRLQRSQDPEMLSF--------ILFFGIAQMIEAVMLLIFGADQRSLPGNALG 129

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                +    +    +            + L+  RT +  A R I  ++    +    + 
Sbjct: 130 SGNIGAFGQEFPDSWWVAAAVSVICIGGLWLYFTRTRLGFATRAIMADRDEARATGIDVD 189

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
                AF +  +  G+AG F       +S             +I+I+G + +        
Sbjct: 190 RVSAIAFMIGLSLAGIAGVFVPYMVGSVS-PSIGDGLTTTSFAIIIIGSLGN-------- 240

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
                           +    +     +      +    L +++L+R   LL     S 
Sbjct: 241 ------PLGTVVGGLVFGVGTMLMQTYYASWSNLVPYALLLIIVLIRPSGLLGKAVRSA 293


>gi|325970849|ref|YP_004247040.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy]
 gi|324026087|gb|ADY12846.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp.
           Buddy]
          Length = 325

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 93/297 (31%), Gaps = 25/297 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            +  +   I +  +Q  I  + A G+S+++ S G++ L+     A+ +  + ++      
Sbjct: 40  PSFLTWNNITNQFVQGTIVGICAMGMSLII-SAGMIDLSVGSTVALIS-GFGVMVLNSTH 97

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           SI L            G+I GL   K R     +    MS                    
Sbjct: 98  SIVLAFLFCLGAGILAGLINGLLVTKGRIAPFIVTLATMSAW-----------------R 140

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            V +++   G        +  F +      + + ++++ +  ++    L + +T      
Sbjct: 141 SVINQMGQGGPFTVDKDMYAPFRAIAAGRILSIPHLMVFLILITVLTGLIMSKTKFGTYV 200

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  NQ+A       +   K   F  +    G+A    A+    I          +  I
Sbjct: 201 YAVGSNQQAARLSGINVNRVKTLIFTYAGLLYGLAAFLLASRLTSIQAASAGMGYEMDAI 260

Query: 271 SIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
           + V +      GG   +        +L  +  +    N   F + L       +   
Sbjct: 261 AAVAIGGTSMDGGRGKIIGTFLGVLMLRIINTVLIMANVPPFLNGLVTGVIIIVAVL 317


>gi|284035968|ref|YP_003385898.1| inner-membrane translocator [Spirosoma linguale DSM 74]
 gi|283815261|gb|ADB37099.1| inner-membrane translocator [Spirosoma linguale DSM 74]
          Length = 328

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/320 (11%), Positives = 94/320 (29%), Gaps = 28/320 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L   V  L L L      + + +  +  Q+ I  + A+G++ V+   G + L+     
Sbjct: 28  LLLAFFVICLTLSLITPKFLTVQNLMIIVTQVSINALLAFGVTFVI-IAGGIDLSIGSMV 86

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+               + + I +  +     G   G    + +     +    M+    
Sbjct: 87  AVTGVVAASFAHPDTYPVAVPIGMGLLAGLLFGAFNGFVITRSKVPPFIVTLGTMTIGRG 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             LI                    +            F        + +  +++ +  L 
Sbjct: 147 LALI--------------------VSKGRPVSNLSDSFNFLGGGKILGIPTLIIILVILF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L+RT +      +  N++A  +    +   K+  + +      +AG    +   
Sbjct: 187 VVCSILLKRTVLGRYIYAVGGNEQAAKASGIQLNRVKMVVYTLCGGLAALAGILLTSRIT 246

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
              P+     E   + + +I G        + +         L   +     ++ L    
Sbjct: 247 TGQPNAGTGFELDAIAAAIIGG-------TSTSGGTGTMTGTLIGALLIGVISNGLDLLN 299

Query: 315 SFNMRHTTLMVIALFLVILM 334
             +     +M + +   +++
Sbjct: 300 VTSYYQQVVMGVIIIGAVVL 319


>gi|156937522|ref|YP_001435318.1| inner-membrane translocator [Ignicoccus hospitalis KIN4/I]
 gi|156566506|gb|ABU81911.1| inner-membrane translocator [Ignicoccus hospitalis KIN4/I]
          Length = 437

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 64/187 (34%), Gaps = 9/187 (4%)

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             V S+     FP   + +     +  + +  +  ++    ++T I  AWR + DN    
Sbjct: 260 IKVPSVDLLLSFPQPLLSFTDLHVWSTVTVLVILIAMTTMFKKTKIGKAWRAVADNPVLA 319

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +    +      A+ V+ A  G+ G F+A            +   +   ++ +LGG+ S
Sbjct: 320 AACGIDVDSVINLAWLVAGALAGIGGLFWAMQTQI--YPELGWMVLLNAFAVAVLGGLGS 377

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                 A+ +L    +L   +       L   D         +      LV+ ++   + 
Sbjct: 378 FWGTFVASYLLAFAEQLGVSI-------LASIDPQLTGYRFMIPFSVFLLVLFVKPEGIA 430

Query: 341 RLRTPSN 347
            +R    
Sbjct: 431 GIRRRKA 437


>gi|323483501|ref|ZP_08088888.1| inner-membrane translocator [Clostridium symbiosum WAL-14163]
 gi|323403199|gb|EGA95510.1| inner-membrane translocator [Clostridium symbiosum WAL-14163]
          Length = 325

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 91/311 (29%), Gaps = 25/311 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  ++  ++  +   +  S   + +  +Q  I  + A G+S+V+ S G++ L+   + A+
Sbjct: 26  LSFILLMIVAVIINPSFLSVTNLTNQFVQGAIVGICAMGMSLVI-SAGMIDLSVGSSVAL 84

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
            +   V L ++       L+           +     +                    NI
Sbjct: 85  ISGLGVSLLNKTHSITLCLLFCLGFGLLLGLINGIFITKG------------------NI 126

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                 +    A   +  +L   G        +  F          + ++++    ++  
Sbjct: 127 APFIVTLATFSAYRSIITQLGQGGPFTVDKSMYDAFRYVASGKIFGIPHLMIIFILITLL 186

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               + +T        +  NQ+A       +   K   +  +    G+A    A+    I
Sbjct: 187 TGFIMAKTKFGRYVYAVGSNQQAARLTGIKVGNVKTMIYCYAGILYGLAAFLLASRLTSI 246

Query: 257 SPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                     +  I+ V +      GG   +        +L  +  +    N   F + L
Sbjct: 247 QAASAGDGYEMDAIAAVAIGGTAMEGGRGKIIGTFLGVLMLRIIQTILVMANVPPFLNGL 306

Query: 311 KFDCSFNMRHT 321
                  +   
Sbjct: 307 VRGLVIIVAVL 317


>gi|228997067|ref|ZP_04156698.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           mycoides Rock3-17]
 gi|229004723|ref|ZP_04162459.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           mycoides Rock1-4]
 gi|228756516|gb|EEM05825.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           mycoides Rock1-4]
 gi|228762692|gb|EEM11608.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           mycoides Rock3-17]
          Length = 286

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 99/305 (32%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  +  LI  
Sbjct: 8   FVNGVSTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYVLALIGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             M      ++         G+++    + +  +               +          
Sbjct: 68  ILMGMFLGFVLERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKVFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +               +I   +  +V++    +   ++L LR+T I    R    +++
Sbjct: 116 PISAKLPTWLQGSLTFDGIILIKYRLFVIIVGVLIYIGLMLLLRKTKIGLMIRAGVIDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINIKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++   
Sbjct: 235 GSVQGSAIASLIVGLAGAFTAYY--------------LPDLSLAINMLMLLFFLVVKPTG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|167759609|ref|ZP_02431736.1| hypothetical protein CLOSCI_01967 [Clostridium scindens ATCC 35704]
 gi|167662735|gb|EDS06865.1| hypothetical protein CLOSCI_01967 [Clostridium scindens ATCC 35704]
          Length = 329

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/321 (14%), Positives = 111/321 (34%), Gaps = 18/321 (5%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +++++  IL L+ ++Y + + +   A    + I  +       +M A GL +VV   G +
Sbjct: 5   KIDRFQGILLLIILLYSIFVAVKNPAFIHIETIFDIIRVASTTLMVAMGL-LVVMISGGI 63

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            ++ +     G+Y+ + +    G+   +     + + G    I+    + +      I T
Sbjct: 64  DVSFMSIALFGSYTTIHIMISMGIDNLIFAFGISALIGGLLGIINALLINWLKLPPFIIT 123

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L    +F  I+  +    +  AG+            +   I  F   +   I  + +   
Sbjct: 124 LGTQNLFHGIMTTFIGDKSFGAGV------------LPKSIHSFGQAAVIKIGGVGLTSS 171

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           ++ +    A     L RT        + ++++A           +L  +  S    G+ G
Sbjct: 172 IIPVLLAGALTWFILYRTMTGRGIFAVGNDEEAARRAGFNPFKIRLIVYVYSGILAGIMG 231

Query: 247 AFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
             + A  + + P+     E ++V ++V     I GG   +        I+  +      +
Sbjct: 232 MMYVAQTNALYPNKLVGDELMVVAAVVIGGTKITGGQGKILGAFLGVIIIYLLNTTLIMI 291

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
                 + L       +    
Sbjct: 292 GLSSSWNNLFVGTILVISVAV 312


>gi|115373170|ref|ZP_01460471.1| ribose transport system permease protein RbsC [Stigmatella
           aurantiaca DW4/3-1]
 gi|115369771|gb|EAU68705.1| ribose transport system permease protein RbsC [Stigmatella
           aurantiaca DW4/3-1]
          Length = 351

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 97/288 (33%), Gaps = 16/288 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  ++  ++         +   + ++  +     + A G+  V+  LG + L+     A
Sbjct: 45  VLGLILLCIIGTALNSDFAAVDNVMNVLTRTAFIGIIAVGMCFVI-ILGGIDLSVGSMAA 103

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + A + +++ ++ G ++   +   A+  G   ++  L         L    LI     + 
Sbjct: 104 LIAGAMILVMNKLGPALGSPVSAIALGIGFAVVLGALFG-------LGHGLLIAKGGIEP 156

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            ++    +   +A +        L         +     + ++      +V L +  +  
Sbjct: 157 FIVTLGTLGIFRAYLTYFADGGALTLDSDLSDAYSPVYYASILGIPVPVWVFLAVALVGG 216

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++    RTA     + I  N++        +   K+  + +    +G+A   +      
Sbjct: 217 LVL---NRTAFGRYVQAIGSNEQVARYAAVDVGRIKVLTYMLLGICVGIATVLYVPRLGS 273

Query: 256 ISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELC 298
            SP      E   + ++++      GG  +++       +L  +  + 
Sbjct: 274 ASPTTGLLWELEAIAAVIVGGTALKGGSGTVTGTVVGAVLLSVISNIL 321


>gi|110668136|ref|YP_657947.1| ABC-type branched-chain amino acid transport system, permease
           protein I [Haloquadratum walsbyi DSM 16790]
 gi|109625883|emb|CAJ52323.1| ABC-type branched-chain amino acid transport system, permease
           protein I [Haloquadratum walsbyi DSM 16790]
          Length = 372

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 60/183 (32%), Gaps = 14/183 (7%)

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G T+ S       P   V        +L    F+   + L L RT +  + R +  NQ+
Sbjct: 200 FGLTIDSWSYEVSLPGGTVTITSASVLLLFVSVFIMLGVHLLLTRTKLGKSMRAMAANQQ 259

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                           + +  A  G+AG   A  +  I+     ++  ++V + VI+GG+
Sbjct: 260 LARVTGIPSEKIIRRTWLIGGALAGVAGFMIALLQGTINY-QIGWTLLLLVFAGVIMGGI 318

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  +  +        F     F               + L++L R   
Sbjct: 319 GSVYGAIVGGILVGLITRVSLIWIPASFTEATGF-------------AVMILILLTRPAG 365

Query: 339 LLR 341
           +  
Sbjct: 366 IFG 368


>gi|314922694|gb|EFS86525.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL001PA1]
          Length = 333

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +   I ++GIQ  +  + A+G++ V+ + G + L+     
Sbjct: 35  ALVGLIILCIALFIATPVFLTVPNIINIGIQAAVVAIMAFGMTFVIVTSG-IDLSVGSVA 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A     + S  GL  WL + +  +I    G + GL     +                
Sbjct: 94  ALSAMVSAWMFSNAGLPGWLTLIIGLLIGLLAGAVSGLAIAYGKLPAFI----------- 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  + +      +        +   ++ +    
Sbjct: 143 -----------ATLAMMSVARGLTLVISGGTPVATSDAVNQLGADVGPVPVPVIMLALAG 191

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N++A       +    ++ +A++  F G+AG   A    
Sbjct: 192 VVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALAGFFAGLAGLVLAGRLS 251

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLS-----KIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI G   S              +L  +      +N   F   
Sbjct: 252 SAQPQAGFGYELDAIAAVVIGGASLSGGSGKASGTFVGAVLLAVIRNGLNILNVSSFWQQ 311

Query: 310 LKFDCSFNMR 319
           +   C   + 
Sbjct: 312 VVIGCVIALA 321


>gi|253579182|ref|ZP_04856452.1| inner-membrane translocator [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849280|gb|EES77240.1| inner-membrane translocator [Ruminococcus sp. 5_1_39BFAA]
          Length = 351

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 91/311 (29%), Gaps = 27/311 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQ---------KYIDSMGIQILIYVMFAWGLS 57
           ++      L ++ ++  LLL +                  YI  +  +    V+ A G++
Sbjct: 8   KITSARLFLPIVCLIAVLLLNVIRTPDFFNVSIRNGVLYGYIVDVINRASELVILAIGMT 67

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           +V  + G   ++     A+ A     + S   +S          ++     ++       
Sbjct: 68  LVTAASGGQDISVGAIMAVAAAVCCQILSGGQVS----------VNDYQNPVILAVIAAL 117

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
               L  A         NI      +    AG  +A  +     T   +  F        
Sbjct: 118 LASALCGAFNGFLVSKLNIQPMVATLILYTAGRGIAQLITNGQITYIRVDSFKMAGGYIG 177

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
              I        +  +   +IL  ++TA+     ++  N KA   +       K   + +
Sbjct: 178 KCPIPTPIFFAIITVVIVYLIL--KKTALGLYIESVGINGKAARLVGLNSTMIKFLTYVI 235

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAIL 291
                G+AG   ++       +    +  +  I  V L      GG  SL         +
Sbjct: 236 CGVLAGIAGIVASSRIYSADANNIGLNLEMDAILAVALGGNFLGGGKFSLIGSVIGAYTI 295

Query: 292 IGVVELCCGMN 302
             +      MN
Sbjct: 296 QALTTTLYAMN 306


>gi|253690512|ref|YP_003019702.1| inner-membrane translocator [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251757090|gb|ACT15166.1| inner-membrane translocator [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 393

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/357 (11%), Positives = 97/357 (27%), Gaps = 47/357 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             ++  +  +     ++  GA  S + + ++  Q  I  + A G+  V+ S   + L+  
Sbjct: 30  YVMIAAIIAIMLFFTYMTDGAYLSARNLSNLLRQTAITGILAVGMVFVIISA-EIDLSVG 88

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA------ 125
               +   +  I    +G  + L I V+  +    G   G      +     +       
Sbjct: 89  SMMGLLGGAAAIFDVWFGWPLPLTIVVTLALGLLLGAWNGWWVAYRKVPSFIVTLAGMLA 148

Query: 126 -----------------------------------TLIMSEIFQNILIKWKPITNGKAGI 150
                                                    +   I  +W+  ++     
Sbjct: 149 FRGILIGITNGTTVSPTSEAMSQIGQSYLPSGIGFMFGAIGLMVFIAWQWRRRSSRARLG 208

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
              +                      +     +   +L +  L    I    RTA     
Sbjct: 209 LPINPPAGDIGRQTVTALVVLGAIYLLNDYRGVPTPVLVLTLLMLGGIFLATRTAFGRRI 268

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N  A       +   K++ FA++   + +AG   ++     SP     +E   + 
Sbjct: 269 YAVGGNIDAARLSGVNVERTKMAVFAINGLMVAVAGLILSSRLGAGSPSAGNIAELDAIA 328

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 329 ACVIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYVVKGGILLLAVWM 385


>gi|212223305|ref|YP_002306541.1| hypothetical branched-chain amino acid transport ATP-binding
           protein livH [Thermococcus onnurineus NA1]
 gi|212008262|gb|ACJ15644.1| hypothetical branched-chain amino acid transport ATP-binding
           protein livH [Thermococcus onnurineus NA1]
          Length = 301

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 98/284 (34%), Gaps = 14/284 (4%)

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
             + G+ +        IG+Y    L    GL+ +L +  + +  G  G+ + L +LK   
Sbjct: 25  YITTGVPNFAHGSFAVIGSYLAYTLYVGLGLNPYLALIPAPITGGLFGIAVYLLTLKPLI 84

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
              A   ++M       +I +  +         +D +        S   F     +    
Sbjct: 85  RKGASVDMLMMATLAVDIILYGLL------GAYSDVISSAFKRNASKFVFTNADFAVSGI 138

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              +    L +     ++ + L RT    A R   +N     ++   +   +L ++ +++
Sbjct: 139 PGRLVVSSLLVVATLVALYILLYRTKFGTALRASMENPALAEAMGIDVERTRLFSWFLAA 198

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  GM GA     ++ +          + V +  I+GG+ ++S        LIG   +  
Sbjct: 199 ALAGMVGAVLPFLQETVPGTGGFII--VSVFAASIVGGLKNIS------GGLIGGYIIGL 250

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
             +   F           +    + ++ +  V+L+    +   +
Sbjct: 251 SESLVTFGLSDVLGTGILVYGKVVSLMIMIAVLLLMPEGITGTK 294


>gi|17942384|gb|AAL50008.1| putative channel-forming polypeptide [Burkholderia cepacia]
          Length = 294

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 93/306 (30%), Gaps = 29/306 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A G++++     +++        +GA   V   ++ GL  WL   +
Sbjct: 10  ILAGITSGFVYALIAVGIAVIFRGSHIINAMQGEFAVVGALVAVFALTKSGLPYWLAALL 69

Query: 99  SAMISGACGMIMGLPSLKF--RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                 A G  + +  ++   R +    + L+++      L        G+         
Sbjct: 70  GVAAGAAIGAAIDVLFVRPMKRRNASEESFLLLTIGLAFTLSAAALYFTGRD-------- 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
               + +           +         +++L    +   + L+ R+T +  +      +
Sbjct: 122 ----SHLLPSYAEGVVEIAGATIPKHALWLILISLLVVGGLRLFYRKTLLGLSMAAASAD 177

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                +    +  A+L  F +  A   +AG                    +   +  ILG
Sbjct: 178 PDGATTTGIDVNRARLYTFLLGGAVGALAGILVTPLIAM--NYHIGIVYTLKGFAAAILG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +         ++  +  L   +    +   +                 L L++++  
Sbjct: 236 GIANPIGAVLGGLMIGLIESLAAVVFPSGYRDAVAMAF-------------LILIMIVMP 282

Query: 337 HSLLRL 342
           + L+  
Sbjct: 283 NGLIGR 288


>gi|146279320|ref|YP_001169478.1| hypothetical protein Rsph17025_3289 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145557561|gb|ABP72173.1| hypothetical protein Rsph17025_3289 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 295

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 107/318 (33%), Gaps = 26/318 (8%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           ++    +        +    I    Y + + GL+++ G L +++      Y  GA++ ++
Sbjct: 1   MMTIFGIPTAALFGQLLVGLINGSFYALLSLGLAVIFGLLRVINFAHGAQYMAGAFAALL 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L ++ G+  W  + ++ +I G  G ++    L        +  L+ +      L      
Sbjct: 61  LLTQTGIGYWPALILAPLIVGLLGALIERTMLSRLYKLDHLYGLLFTFGLALTLEGTFRW 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G +G   A      G               F+   I+  +V++    +   + L + +
Sbjct: 121 FFGTSGQPYAPPAALTGA----------VNLGFMFLPIYRGWVVVASLAVCIGVWLLIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T +    R   +N     S    +    L  F         A A   A+       +   
Sbjct: 171 TKLGAYLRAATENPVLVQSFGVNV--PLLLTFTYGLGAALAAFAGVLAAPVYQVSPLMGS 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           +  I+V ++V++GGM S+        +L     L                  +      +
Sbjct: 229 NLIIVVFAVVVVGGMGSILGAIITGYMLGIAEGLTKVF--------------YPEASNIV 274

Query: 324 MVIALFLVILMRSHSLLR 341
           + + + +V+++R   L  
Sbjct: 275 IFVIMAIVLILRPAGLFG 292


>gi|328543486|ref|YP_004303595.1| Inner-membrane translocator [polymorphum gilvum SL003B-26A1]
 gi|326413230|gb|ADZ70293.1| Inner-membrane translocator [Polymorphum gilvum SL003B-26A1]
          Length = 304

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 95/305 (31%), Gaps = 15/305 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++  + A GL+++ G +G+++L     Y +GAY+            W+    
Sbjct: 8   ILNGLQYGVMLFLLAAGLTLIFGIMGVINLAHGSLYMVGAYAG----------TWVAAET 57

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            +   G    +          +   +  L   +    +L  +  I      I +      
Sbjct: 58  GSFWLGLPAALAAAAVTGLAIEAAVVRRLYARDHLDQVLATFALILTFNQLIVIGFGRQP 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           + T +             + Y  +   ++     ++  +   + RT I    R    N++
Sbjct: 118 VFTMLPEAFAGSIELIPGLHYPPYRLLIIAAGLLVAVGLYFLINRTRIGMLVRAGSTNRE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       F + +   G+AG               +      V+ ++    +
Sbjct: 178 MVRALGVDIRLLYTVVFGLGALLAGLAGYMAGPILAVQVGMGEQILLATFVVVVIGG--V 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM---RHTTLMVIALFLVILMR 335
            S+     A  +L  V              ++    +  +     +  + + + LV+L+R
Sbjct: 236 GSIRGAFVAGIVLGIVDTCLRAFLPGLLRQVMAGPEADALGIGISSMGIYLLMALVLLIR 295

Query: 336 SHSLL 340
              L 
Sbjct: 296 PKGLF 300


>gi|299533354|ref|ZP_07046737.1| UrtC [Comamonas testosteroni S44]
 gi|298718670|gb|EFI59644.1| UrtC [Comamonas testosteroni S44]
          Length = 438

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 110/324 (33%), Gaps = 19/324 (5%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +L      L  +      +     +M  QI   ++     +I++G  G+LS    +   +
Sbjct: 25  ILIWGLFALALIVAPLIFTSSLALTMLSQIGYLIIICLSYNILLGQGGMLSFGHAVYTGL 84

Query: 77  GAYSYVILGS-----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           G++  +   +        + + L+  V  +       + G  + K  G   A+ T+ + E
Sbjct: 85  GSFLAIHAMNKAAAGEMAIPLVLIPVVGGLAGMFFAALFGYVTTKKSGTTFAMITMGLGE 144

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +  ++ + +     G+ G             + +   + +F        + +YY++   C
Sbjct: 145 LVASMALMFPEFFGGEGG-------------ITTDRVYSKFFGLDFGSGLQVYYLIAVYC 191

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           F+  + +     T +      +RDN +    +       +  AF ++  F G+ G   A 
Sbjct: 192 FVCTAAMFAFTGTPLGRMLNAVRDNPERVEFVGYNTQRVRYFAFIIAGFFAGIGGGLTAI 251

Query: 252 SRDRIS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           + + I+  D      +   +    LGG T          +L+    L   +   +   L 
Sbjct: 252 NFEIITAMDSVSVVRSGGYLLFTFLGGATFFFGPIIGAVLLVLASVLLSELTKAWLLYLG 311

Query: 311 KFDCSFNMRHTTLMVIALFLVILM 334
                  M     +   + + + +
Sbjct: 312 LVFLLMVMYAPGGVASLIMMNLRV 335


>gi|226364272|ref|YP_002782054.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226242761|dbj|BAH53109.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 289

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 89/307 (28%), Gaps = 28/307 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y +   GL I+  S  +++        +  Y  +         +  L+  
Sbjct: 8   LTTGIANGAVYGLIGLGLVIIFRSTDVMNFAMASLSTLAIYVALSAYGAGVGIVVALVVA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A  + +  ++            L  A L+++     I+        G+        +  
Sbjct: 68  VAFGALSGVVVREALIRPLGQGKLFAA-LVVTMGLSIIVEHVIGQYWGEQPRRFPQLVDG 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +   S +                   +L      ++I     RT + +A R + ++ +
Sbjct: 127 TISIGNSNLMLQD------------LVTILLAALAVSAIAYLFTRTPVGSAMRAVAESAE 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +          A+A+  A   +    +A         +          + ++LGG+
Sbjct: 175 TAEIMGINAHKVARIAWALGMALAVLGVFLYAPKTGV--SPVILAPVLFRAFAGILLGGL 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        ++  +  L        F               T +     LV+L+R   
Sbjct: 233 TSMYGAVIGGLVIGVLDNLAAAYISASF-------------RDTFVFCVAVLVLLIRPQG 279

Query: 339 LLRLRTP 345
           +   +T 
Sbjct: 280 IFGRQTF 286


>gi|90417667|ref|ZP_01225579.1| putative ribose ABC transporter, permease protein [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90337339|gb|EAS50990.1| putative ribose ABC transporter, permease protein [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 335

 Score = 54.5 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 98/312 (31%), Gaps = 15/312 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  ++   +  +          I ++  Q+ I  + A G++ V+ + G + L+     A+
Sbjct: 22  LFLLLLVAIFAILEPRFLHPLNIFNVLRQVSIAGLIAIGMTFVILTAG-IDLSVGSLLAL 80

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                  +        + +    A  +     ++   ++   G  L    +      +  
Sbjct: 81  AGLVGAYVAKGGLDDRFAIAAGDAPGNPVIFAVLAALAVGMAGGALQGLAIT-----RLK 135

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           +  +     G      A  L+  G  +      + +     I  + +  ++  +  L+A 
Sbjct: 136 VPPFVVTLGGLTAFRGAALLFSGGGPISGFTADYAWWGQGRISMVPIPVIIFVLAALAAH 195

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++L  R TA          N +A       I    +  + +S  F G+A    +A  +  
Sbjct: 196 LVL--RYTAFGKHVYATGGNARAAALNGVPIRRIVMLVYVISGFFCGLAAFLLSARLNSA 253

Query: 257 SPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                  S  + VI+ V++      GG+ S+        ++  +      +N   F   +
Sbjct: 254 EAVA-GLSLELTVIASVVIGGTSLFGGVGSIFGTVVGALLIGVLTNGLVLLNVSSFIQQI 312

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 313 LIGVILVAAVAL 324


>gi|239816327|ref|YP_002945237.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239802904|gb|ACS19971.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 319

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 95/309 (30%), Gaps = 25/309 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  +   +          +   +  +  Q+++  + A G ++++ + G + L+C +  A+
Sbjct: 18  LALLGACIFFATQSDRFLTGDNLSLILQQVMVVGVIAIGQTLIILTAG-IDLSCGMVMAL 76

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G        +  GL + + I     ++   G++ GL   + +     +    ++  F   
Sbjct: 77  GGIIMSKFATELGLPVPVAILCGIGVTTLFGLVNGLLVTRIKLPPFIVTLGTLNIAFAIT 136

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            +                      T            ++F +    + +  + M  L A 
Sbjct: 137 QLY-----------------SSSQTVTDLPAGLTGLGTTFAVGGAAVAWGAVLMLVLYAL 179

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               LR TA       + +N +A   +        L  +  + A  G+A     A    +
Sbjct: 180 AWFVLRETAAGRHIYAVGNNAEATRLVGIPTQRVLLGVYVAAGALYGIASLLSVARTG-V 238

Query: 257 SPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                  +EN+  I+ V+L      GG   +        I+         M       +L
Sbjct: 239 GDPNAGQTENLDAITAVVLGGTSLFGGRGVVLGSLIGVLIVGVFRNGLTLMGVSSIYQVL 298

Query: 311 KFDCSFNMR 319
                  + 
Sbjct: 299 VTGVLVILA 307


>gi|167772554|ref|ZP_02444607.1| hypothetical protein ANACOL_03932 [Anaerotruncus colihominis DSM
           17241]
 gi|167665032|gb|EDS09162.1| hypothetical protein ANACOL_03932 [Anaerotruncus colihominis DSM
           17241]
          Length = 293

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 92/308 (29%), Gaps = 29/308 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I S      IY + +   +I+  + GLL+ +      +GAY +         +   +  +
Sbjct: 13  IVSGLALGFIYALVSIEYTIIFNATGLLNFSHDKLIMLGAYVFAGQFVLRMGAPPAIAII 72

Query: 99  SAMISGACG--MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           + + +      ++        R     +  +I + I   IL +   +  G     V   L
Sbjct: 73  ATVATMFLFGVLVATGIFNPLRNMASPVFAVIGTVILGRILTELARVIWGATPFTVPGFL 132

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                               ++       ++L    +  ++ ++ + T +  A R ++ N
Sbjct: 133 K------------GIVKIGSIVIPRANIAIILVSAVIVTALQIFFKTTKMGKAMRCVQQN 180

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   +        A+S+      G                        +  ++G
Sbjct: 181 KTAATLMGINVTANINLTIALSAVICSAIGILVIPLFTIDLTIANMIGLKG--FAAGVIG 238

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G   L        ++  +  L   +    +   + F             + L + +L++ 
Sbjct: 239 GFGYLPGAIAGGILIGILENLSTLVIPTLYKDCVAF-------------VLLIVFLLVKP 285

Query: 337 HSLLRLRT 344
             LL  R 
Sbjct: 286 SGLLGHRQ 293


>gi|70729963|ref|YP_259702.1| sugar ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68344262|gb|AAY91868.1| sugar ABC transporter, permease protein [Pseudomonas fluorescens
           Pf-5]
          Length = 340

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/329 (13%), Positives = 99/329 (30%), Gaps = 26/329 (7%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSI 58
             R    +  + L+ +   L+  LF    + Q ++ +      M +Q+ +  + A G++ 
Sbjct: 16  PRRRLPTELSIFLVLIGIGLVFELFGWIVRDQSFLLNSQRLVLMILQVSVIGLLAIGVTQ 75

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           V+ + G + L+     A+ A     L              S         +  LP     
Sbjct: 76  VIITTG-IDLSSGSVLALSAMIAASLAQ-----------TSDFTRAVFPSLTDLPVWIPV 123

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
              L +  L  +     I +   P      G+ V+ R      T    +       + + 
Sbjct: 124 LAGLGVGLLAGAINGSVIALTGIPPFIATLGMMVSARGLARYYTQGQPVSMLSDSYTAIG 183

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
           +      + L +        + LR T        I  N +A  +    +    +  ++++
Sbjct: 184 HGAMPVVIFLVVA---LIFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLVIVYSIA 240

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIG 293
               G+AG   +A        M    E   + + VI      GG+  ++       IL  
Sbjct: 241 GLLAGLAGVVASARAATGQAGMGMSYELDAIAAAVIGGTSLAGGVGRITGTVIGALILGV 300

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           +      +    +   +       +    
Sbjct: 301 MASGFTFVGVDAYIQDIIKGLIIVVAVVI 329


>gi|331649051|ref|ZP_08350139.1| ribose transport system permease protein RbsC [Escherichia coli
           M605]
 gi|330909300|gb|EGH37814.1| ribose ABC transport system, permease protein RbsC [Escherichia
           coli AA86]
 gi|331042798|gb|EGI14940.1| ribose transport system permease protein RbsC [Escherichia coli
           M605]
          Length = 329

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 103/321 (32%), Gaps = 27/321 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           ++ +    +    VV  +L      +  +   I ++ +Q+ I  + A+G++ V+  LG +
Sbjct: 22  KVFRQYGGILSGMVVLIILFSFINDSFFTANNITNIILQVSIIAITAYGMTYVL-LLGDI 80

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+      +  S      ++L+   ++I+     ++        G    I T
Sbjct: 81  DLSVGSTIALIGTFAALGAS--WGVPFVLLVPLSIIAALALGMINGGLTAIAGIPSFIVT 138

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           +    IF+ I                             +I+   F +      +++   
Sbjct: 139 VATMGIFRGIAYIVTDGM-------------------PIMIKDDAFLALGNGEFLYIPIP 179

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  L       L +T           N++A       +   K+  F +++   G++G
Sbjct: 180 IWILIILLLINHFILTKTTFGRKIYITGGNKEAAIYSGINVTRLKIKVFMITAVLAGISG 239

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGM 301
              A+      P+     E   + + V+      GG  ++         +  +      M
Sbjct: 240 MILASRLYSGQPNSALSYELDAIAAAVLGGTSLNGGYGTVVGTVIGALTIGVINNGMNLM 299

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
           N  YF  ++       +    
Sbjct: 300 NVPYFYQMVVKGLVILVAVYF 320


>gi|150398065|ref|YP_001328532.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
 gi|150029580|gb|ABR61697.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
          Length = 295

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 47/316 (14%), Positives = 106/316 (33%), Gaps = 26/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    I    Y + + GL+I+ G L +++      Y +GA+   +L S
Sbjct: 4   IFGIPLQAFLGQLLIGLINGSFYALLSLGLAIIFGLLRVINFAHGAQYMLGAFIAWLLLS 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+  W  + ++ ++ G  G  +    L+       +  L+ +      +        G
Sbjct: 64  YLGIGYWPALVLAPLLVGLIGAAIERTMLRQLYSLDPLYGLLFTFGLALTVEGTFRYIYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G   A             +        F+   I+  +V++    +     L + +T +
Sbjct: 124 ASGQPYATPA----------LLAGGANLGFMFLPIYRGWVIVFSLIVCLGTWLVIEKTKL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
            +  R   +N     S    + F     + + +A   +AG   A         +   +  
Sbjct: 174 GSYLRAATENPVLVQSFGINVPFLLTLTYGLGAALAALAGVLAAPIYQV--SPLMGSNII 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+        +L     L                  +      ++ +
Sbjct: 232 IVVFAVVVVGGMGSIMGAIVTGYLLGVAEGLTKVF--------------YPEASNIVIFV 277

Query: 327 ALFLVILMRSHSLLRL 342
            + +V+L+R   L   
Sbjct: 278 IMAIVLLLRPAGLFGR 293


>gi|84502414|ref|ZP_01000550.1| ABC transporter permease protein [Oceanicola batsensis HTCC2597]
 gi|84389226|gb|EAQ02023.1| ABC transporter permease protein [Oceanicola batsensis HTCC2597]
          Length = 292

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 83/304 (27%), Gaps = 25/304 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            S      IY   A  L ++  ++  L++       I  + +      +G+  W    ++
Sbjct: 9   LSGLANGAIYACIALALVMIYKTIDHLNIAQGEMAMISTF-FAWQLMEWGVPYWPAFFLT 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
             ++   G+ +     +       +  L        IL     +            ++  
Sbjct: 68  IFVAFCGGVAIDRVLFRPLAKAPVLTHLAGFVALFMILNSVAGL------------VWDF 115

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                             +       ++     L   + L+ + T I  A R      ++
Sbjct: 116 TIKPFPYPFGTSPFLGSSLISTHQAAMIGISMVLLFLLYLFFQFTRIGLAMRAAATLPES 175

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +           + ++SA   +AG   A         M          +  +LGG++
Sbjct: 176 ARLVGIRTGRMVSLGWGMASAIGAVAGMLIAPVVFLEPNMMAGILLYG--FAAAVLGGLS 233

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S +       ++     L         + +             L +  +  V+ ++ + L
Sbjct: 234 SPAGAVAGGLLVGVFENLVGTFVPGVGHEI----------KLPLALALIIAVLALKPNGL 283

Query: 340 LRLR 343
              +
Sbjct: 284 FGRK 287


>gi|323954796|gb|EGB50577.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H263]
          Length = 257

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/247 (12%), Positives = 73/247 (29%), Gaps = 2/247 (0%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +       Y + A G ++V G +G+++      Y IG+Y   ++ +   +       +
Sbjct: 12  MFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMLGIDTGWL 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI-LIKWKPITNGKAGIYVADRLY 157
             +      +++                     +   I  I           +    R  
Sbjct: 72  LVVAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGSRDV 131

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            L +            +           + +       ++ +++R + +  A R   ++ 
Sbjct: 132 ALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRACRACAEDL 191

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           K    L           F + +A   +AG         I+P    F   +   +  +LGG
Sbjct: 192 KMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGG 250

Query: 278 MTSLSKI 284
           + S+   
Sbjct: 251 IGSIPGA 257


>gi|312135937|ref|YP_004003275.1| inner-membrane translocator [Caldicellulosiruptor owensensis OL]
 gi|311775988|gb|ADQ05475.1| inner-membrane translocator [Caldicellulosiruptor owensensis OL]
          Length = 327

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/297 (14%), Positives = 94/297 (31%), Gaps = 24/297 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               + + + +  + +    + A G+++V+   G + L+      + A     L   YG+
Sbjct: 41  PNFLTAENLITTALGLAADGILAIGMTVVL-VSGGVDLSVGSVLGLSAVIAGGLYLNYGV 99

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           +IW+   ++ +I    G+  G    +     L +   +M                     
Sbjct: 100 NIWIGSLIALVICALIGLFNGYFIARIGIPPLIVTLAMMGIA------------------ 141

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
             A  +   G+ +        F          + + ++    L       +R++A     
Sbjct: 142 RGAAYVLTQGSPLSLYGNLKGFDFLGQGKIAGIPFFIIFFILLIILFDFLMRKSAPMRLV 201

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N+ A       +   K+S + + S   G+AG F  +     +P     SE   + 
Sbjct: 202 YYVGSNENAAKLSGINVPKVKISVYVLMSVLAGIAGIFTLSRFSVAAPTAGNGSELNAIS 261

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + VI      GG  ++      T ++  +      +N   +   L          T 
Sbjct: 262 ACVIGGASLAGGEGTVLGAILGTILVGIINNALVLLNVSVYWQNLVSGVILIAAVTI 318


>gi|302387363|ref|YP_003823185.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
 gi|302197991|gb|ADL05562.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
          Length = 322

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 93/262 (35%), Gaps = 21/262 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             L+  ++  +     GA  + K I ++  QI   +  A G+++V+  LG + L+     
Sbjct: 22  ALLILCIFLSVFPKTSGAFLTHKNIFNVLRQISSNLFLACGMTMVI-ILGGIDLSVGSII 80

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+         +RY L I+  I +  +I  A GM+ G+   K           I++    
Sbjct: 81  ALSGCVAAGCVARYNLPIFAAIIIGVLIGMAVGMMNGVVISKTTIPPF-----IVTLATM 135

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           N+      +  G + + V  +                +      Y   +   ++ + F+ 
Sbjct: 136 NVAKGLAYVYTGGSPVRVVTKA---------------WQFLGAGYIGGIPTPVILLVFVL 180

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + + +T +      +  N +A      +    KL     S    G+AG   A+   
Sbjct: 181 LITAIIMNKTKLGRHIYAVGGNSQAAKFSGISTARVKLLVHTYSGIMAGLAGVVLASRMY 240

Query: 255 RISPDMFKFSENIIVISIVILG 276
              P     +E   + ++V+ G
Sbjct: 241 SGQPTAGDGAEMDAIAAVVVGG 262


>gi|254469555|ref|ZP_05082960.1| ribose high-affinity ABC transporter permease component
           [Pseudovibrio sp. JE062]
 gi|211961390|gb|EEA96585.1| ribose high-affinity ABC transporter permease component
           [Pseudovibrio sp. JE062]
          Length = 314

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 80/313 (25%), Gaps = 25/313 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++    +            + ++  Q  I  + A G++ V+ + G + L      A
Sbjct: 13  LIGLIILMAAVSFANANFLGVDNMLNILRQTSINAVIAMGMTFVILTAG-IDLAVGSILA 71

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                   L       +  L     + +G       + S                + F  
Sbjct: 72  FAGAICASLIGMDTPLVIALFITIMVGAGLGATSGVIISYF------------NVQPFIA 119

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+    I            +      V      F     F I    +  V++       
Sbjct: 120 TLVGMTMIRGATLVYTQGRPISTGYFDVAESFYQFGGGYIFGIPNPVILMVVIFAICWFI 179

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  +T        I  N+         +   K+  +A+S A   +AG    A  + 
Sbjct: 180 L-----SQTRFGRYVYAIGGNENVARLSGINVKKVKILVYALSGALAALAGIILTARLES 234

Query: 256 ISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             P        +  I+ V+LGG         +        I+  +      M+   +  +
Sbjct: 235 AQPTA-GLGYELDAIAAVVLGGTSLAGGKGRIFGTIIGALIIGVLNNALNIMDVSSYYQM 293

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 294 IAKGAVILLAVVV 306


>gi|107022487|ref|YP_620814.1| inner-membrane translocator [Burkholderia cenocepacia AU 1054]
 gi|116689436|ref|YP_835059.1| inner-membrane translocator [Burkholderia cenocepacia HI2424]
 gi|105892676|gb|ABF75841.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116647525|gb|ABK08166.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 311

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 101/312 (32%), Gaps = 22/312 (7%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +     L+  M + GL+++    G+L+      Y +GAY    + +      W  + ++ 
Sbjct: 10  NGLSYGLLLFMLSAGLTLIFSVQGVLNFAHASFYMLGAYVGYSIAA--WAGFWPALVLAP 67

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +  G  G       L+        + L+++     ++ +   +  G A +       F G
Sbjct: 68  LAVGLLGAGCERALLRRVQARGHTSELLLTFGLAYLIGEGAKLAWGLAPLPAPVPPLFDG 127

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             V             +    +  +++     +  ++ + LR + I    R    ++ A 
Sbjct: 128 APVT---------VFGLALPRYRLFMMAMSTTMLVALGVLLRASRIGLVVRAALTHRAAV 178

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +L   +     + F   +A   +AG   A     +       +   +V ++V++GG+ S
Sbjct: 179 EALGYDVPRVMTALFGAGTALAALAGVIGAPLA--VIEPALAETVGSVVFAVVVIGGLGS 236

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN---------MRHTTLMVIALFLV 331
           L     A+  +               +       +                +  + L  V
Sbjct: 237 LGGAFVASLAVGFAQTFAAASGTSLRDLAQWTGIALPDSVAAVSIAQLAPLVPYLLLVAV 296

Query: 332 ILMRSHSLLRLR 343
           ++ R   L   R
Sbjct: 297 LVARPRGLFGER 308


>gi|160940527|ref|ZP_02087871.1| hypothetical protein CLOBOL_05422 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436487|gb|EDP14254.1| hypothetical protein CLOBOL_05422 [Clostridium bolteae ATCC
           BAA-613]
          Length = 331

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/325 (9%), Positives = 90/325 (27%), Gaps = 28/325 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  + +  + +  ++  +LL              ++  QI      + G+ + +  LG +
Sbjct: 22  RYCRENIGIIMGCLLLGILLTFASENFMKVSNWTNVLRQISTNFYLSVGIMLAI-ILGGI 80

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+       L +  G+ +   I +  +   A G++ GL           +  
Sbjct: 81  DLSVGSVLAVSGVISASLITNNGMPVGAAILLGCLAGTAIGLLNGLIIAFTDMPPFVVTI 140

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
             M+       +         +                       F +  + Y   +   
Sbjct: 141 ATMNIGRGVAYLYADGNPIRVSNDT--------------------FEAIGLGYLGPIPLP 180

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           ++ M  +   +   + ++ + +    +  N++A       +    +  + +S      AG
Sbjct: 181 VIYMAVILVFMYFLMNKSKMGSHIYAVGGNRQAAVYSGINVRKVIIFVYTLSGLAASWAG 240

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCG 300
              A+                  ++  +L      GG   +  +     ++  +      
Sbjct: 241 IVLASRMAS-GQPATGVGYEADAVAAAVLGGTSMTGGAGKVGGMVLGALLIGMLNNGLNL 299

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMV 325
           +    F   +       +     + 
Sbjct: 300 LGVNSFWQYVVKGTVILVAVYIDIF 324


>gi|320449659|ref|YP_004201755.1| branched-chain amino acid ABC transporter permease [Thermus
           scotoductus SA-01]
 gi|320149828|gb|ADW21206.1| branched-chain amino acid ABC transporter, permease protein
           [Thermus scotoductus SA-01]
          Length = 297

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 97/306 (31%), Gaps = 20/306 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I S  +  L+Y + A G  ++  +  +++       A+GA+         G    L   +
Sbjct: 8   IFSGIVLGLVYALAALGFVLIYKASRVVNFAQGQFIAVGAFLAYWAMVSLGAPFLLAAAL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  ++   G  +    LK       I+ ++ +    ++L     +T   AG +       
Sbjct: 68  ALALTALLGFGVERVFLKRLVGQPIISVIMATIGLASLLNGLIHLTPYGAGNFSYP---- 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S +         V         +        +   + +R+ +  A R++ D+Q 
Sbjct: 124 ------SFLPAGGVTLLGVQISYAQLLAVAFTLLFLLAFTWFFQRSTLGVAMRSVADDQM 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL  ++      A+A +      AG             +        V  +VILGG+
Sbjct: 178 AAMSLGVSVEKVFALAWAAAGLTAAAAGMVVGTISGLNLDGLVHIGLR--VFPVVILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++  +  L  G    Y                    + L LV+  + H 
Sbjct: 236 DSIPGAVVAGILIGVLENLAAGFLDPYIPG--------GGTRDVFPFLVLLLVLWFKPHG 287

Query: 339 LLRLRT 344
           L     
Sbjct: 288 LFGTEE 293


>gi|90422882|ref|YP_531252.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90104896|gb|ABD86933.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 336

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/298 (14%), Positives = 92/298 (30%), Gaps = 16/298 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAM 101
               ++  + A GL++V G + +L+       A+GAY   ++       +    + ++  
Sbjct: 48  LAMGMMIFIMASGLTLVFGLMDVLNFGHGAFIAVGAYVATLVLLPLAAWVQADSLWLNLA 107

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           +     +     S         +  L +       ++              A     +  
Sbjct: 108 VLAPAALAAMAMSGALGLVVERVLILPVYGQHLKQILMTTGGLIVAEQALYALWGPQIIP 167

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
                     F    V    +    +     +   I L L R+ I    R   +N++   
Sbjct: 168 LPLPTSLRGSFILGDVAIAKYRLLAMGVGLAVFVGIQLVLTRSKIGLLIRAGVENREMVE 227

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           +L   I    L  F V SA  G+ G  +A  R+++          ++V  +VI+GG+ S+
Sbjct: 228 ALGYHIKRLFLGVFMVGSALAGLGGIMWALYREQV-HASMGNDLTVLVFIVVIIGGLGSI 286

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
                   ++  V      +                       ++ +  +++ R   L
Sbjct: 287 GGCFIGALLVAMVANYGGFL--------------LPKLALVSNILLMVAILMWRPRGL 330


>gi|325527529|gb|EGD04852.1| putative transport system protein [Burkholderia sp. TJI49]
          Length = 286

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 104/304 (34%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++Y + A GLSIV G L  ++      Y +GAY       ++  + W+ + +
Sbjct: 8   IVNGIGVGMLYFLLAVGLSIVFGLLRFVNFAHGAFYLLGAYLCY-QALQWSANFWVALAI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ GA   ++    L+          ++ +     +L +   +  G  G  V      
Sbjct: 67  VPLVVGAFAWLVEKLVLRHVYAQQHEFHILATVGLALVLQECAILAWGPLGDNVPPPDAL 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  +              +Y  +  +V+     L+A +   L  T + +  R   ++ +
Sbjct: 127 SGVVI----------WGSFVYPKYRLFVIGFTAVLAALLWWVLEGTRLGSTVRAGSESSE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       FA+ +A   +AG   A  R        +      V+ +V    M
Sbjct: 177 MVSLLGINVTRVFSLVFALGAATAALAGVLAAPIRGVDPFMGIEALGVAFVVVVVGG--M 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +         ++  V  L   +              +      ++ +A+  V+L+R + 
Sbjct: 235 GNFLGALVGGLLVGIVQSLMSTL--------------WPEGARLMIYVAMAAVLLLRPNG 280

Query: 339 LLRL 342
           LL  
Sbjct: 281 LLGR 284


>gi|295401273|ref|ZP_06811245.1| inner-membrane translocator [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294976680|gb|EFG52286.1| inner-membrane translocator [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 336

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 95/312 (30%), Gaps = 13/312 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  +V      + L    + +    +   I I  + A G++  +   G   L+     +
Sbjct: 27  LLAILVVIAYFGITLDRFFTYENFSDILRSISIVTLVAIGITFSLIVDG-FDLSVGSTVS 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   +       Y   I + + V  ++  A G++  L  +K +   L +ATL        
Sbjct: 86  LTTIASAAALVLYRQEILVTLLVPLLLGIAVGLLNSLLIVKLKLPDL-LATLATMYAING 144

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + +        G  + + +               F        + + + +L M  +  
Sbjct: 145 VQLTYTK------GFSIYNDMPLPDGGTAPGKFIPSFLFIGQGEVLGIPFSVLLMLVVVI 198

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +  L+L  T     +    +N++A       +   +  A+ +S  F  + G   A+    
Sbjct: 199 ATHLFLTYTKPGRLFYMTGENREAARLSGIPVNRYRTYAYVISGFFAALGGIVLASRIGT 258

Query: 256 ISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                        V +      V   G  ++      + ++  ++     MN  Y+   +
Sbjct: 259 GQVSAGASFLMDGVAAAYIGFSVFGAGKPNVIGTLFGSILMGVLLNGLTMMNVPYYAQDI 318

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 319 IKGAILVGALAL 330


>gi|228990980|ref|ZP_04150943.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           pseudomycoides DSM 12442]
 gi|228768760|gb|EEM17360.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           pseudomycoides DSM 12442]
          Length = 286

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 99/305 (32%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  +  LI  
Sbjct: 8   FVNGVSTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYVLALIGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             M      ++         G+++    + +  +               +          
Sbjct: 68  ILMGMFLGFVLERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKVFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +               +I   +  +V++    +   ++L LR+T I    R    +++
Sbjct: 116 PISAKLPTWLQGSLTFDGIILIKYRLFVIIVGVLIYIGLMLLLRKTKIGLMIRAGVIDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINIKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++   
Sbjct: 235 GSVQGSALASLIVGLAGAFTAYY--------------LPDLSLAINMLMLLFFLVVKPTG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|288915955|ref|ZP_06410337.1| inner-membrane translocator [Frankia sp. EUN1f]
 gi|288352584|gb|EFC86779.1| inner-membrane translocator [Frankia sp. EUN1f]
          Length = 369

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/320 (11%), Positives = 87/320 (27%), Gaps = 25/320 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++ LL V++ +          S   + S+     +  + A G +++    G   + 
Sbjct: 14  RRISVVYLLVVIFAVFSITIPDLFLSSITLQSVASSQAVVGILAVG-ALLPFVAGEFDIT 72

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+       L + +     + + + A++      +     +   G    IATL  
Sbjct: 73  VGSNMALSVIIITSLSNSHPGVGVIPMCLIAVLVCGFVGLCNGLLVGRFGINSFIATLAT 132

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           S++   + +K                                F +      + +   +  
Sbjct: 133 SQVIVAVALKI------------------SNNQQVLASLPHAFMNLGQGRSLGLPNGVFV 174

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              L+  +   L+ T +         N++A            + +F  S    G+AG  +
Sbjct: 175 ALGLALVVWYILQFTKLGRHLYAAGFNREAARLSGVRTRPVVIGSFVASGLIAGVAGVVY 234

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMT-----SLSKIAKATAILIGVVELCCGMNFY 304
                  S +           + V LG        ++     A   L   V+     +  
Sbjct: 235 VGQVGTFS-NSIGAPLLFPAFAAVFLGATQFNFRPNVWGTLLAIFTLALGVQGLQLSSSS 293

Query: 305 YFNSLLKFDCSFNMRHTTLM 324
               +        +    + 
Sbjct: 294 GGFWITPLFNGVALVAAVMF 313


>gi|262276681|ref|ZP_06054482.1| inner-membrane translocator [alpha proteobacterium HIMB114]
 gi|262225153|gb|EEY75604.1| inner-membrane translocator [alpha proteobacterium HIMB114]
          Length = 297

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 101/302 (33%), Gaps = 14/302 (4%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
             +F     + + I    +  +++ + A+G+++  G + ++++       +G Y      
Sbjct: 3   FLVFQIPALTAQAILDGLLLGILFALIAYGMALQWGVMNIINIAQGELVIMGGYV-AYFM 61

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
              G+     I VS +I    G+ +    +    D     +++ +     ++++      
Sbjct: 62  YTAGIHPAFGIIVSPIIMFFVGVGIYKLVINKVVDRDMFISILATFGISILMMQLMNFGF 121

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G                 +S        ++ V       +  +     + ++ +++R++ 
Sbjct: 122 GSD-----------VVVAQSNFGTTMLFNNSVTLPNSKIFSAVVSILFAVALTMYMRKSK 170

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +  A R    N +A   L         S F +++A  G+AG+  A               
Sbjct: 171 LGRAIRATAQNARAAKILGVDTEKVYASTFGINAALCGVAGSLVA--ITFTLHPYVGLPY 228

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
            +    IVI+ G+ +L  +A +   L    E    +    F     F     +       
Sbjct: 229 TVRSFMIVIVAGLGNLPGVAMSGMGLGVFEEFADYILGTEFRIAAVFFMLVFILLYRRFK 288

Query: 326 IA 327
           +A
Sbjct: 289 LA 290


>gi|328479508|gb|EGF48761.1| branched-chain amino acid ABC transporter permease [Lactobacillus
           rhamnosus MTCC 5462]
          Length = 230

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 74/234 (31%), Gaps = 11/234 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A G ++V G + L++      Y +GA+      +         +  
Sbjct: 8   IINGLSLGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFWGYYAINYLHFGFVTALLS 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++   G+++   + +   +   IA LI +      L        G            
Sbjct: 68  AMLMASLSGVLIEYLAYRPLRNSPRIAALITAIGVSFFLENGMSFLFGAN---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +I    +    V        +L     L   +   +++T +  A R +  + +
Sbjct: 118 -ARNFPQVIATKTYHLGGVDILNVQLLILFTSLVLMILLQFIIKKTTMGKAMRAVAVDPQ 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           A   +           FA+ SA  G AG       + I P M         ++ 
Sbjct: 177 AAQLVGINPDHVISFTFALGSALAGAAGVMIGLYYNSIDPLMGMVPGIKAFVAA 230


>gi|238758513|ref|ZP_04619689.1| Autoinducer 2 import system permease protein lsrC [Yersinia aldovae
           ATCC 35236]
 gi|238703213|gb|EEP95754.1| Autoinducer 2 import system permease protein lsrC [Yersinia aldovae
           ATCC 35236]
          Length = 334

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 87/291 (29%), Gaps = 31/291 (10%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             + +    +     I ++ A G ++V+     + ++      + A +  +     G  +
Sbjct: 6   YFNLQTFTMIFSSAQILILLAIGATMVM-LTRNIDVSVGSITGLCAVTVGM-ALNAGFGL 63

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA--TLIMSEIFQNILIKWKPITNGKAGI 150
            L    + ++    G   G+     R   +     TL +      +L   K I    A  
Sbjct: 64  ALSCLFALLVGMGAGFFNGILVTWLRIPAIVATLGTLGLYRGLMLLLTGGKWIEGLPA-- 121

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                                  S        +  +   +  L  ++ L L +TA   ++
Sbjct: 122 --------------------DLKSLSTPILFSISPIGWLIMLLIVAMALLLGKTAFGRSF 161

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
               DN +    L       ++ AF+++     +AG  FA+    I        E   + 
Sbjct: 162 YATGDNLQGARQLGIRTDSIRIFAFSMNGVMAALAGIVFASQIGFIPNQTGSGLEMKAIA 221

Query: 271 SIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + V     +LGG  ++        +L  +  +   +    + +        
Sbjct: 222 ACVLGGISLLGGTGTIIGAILGAYLLTQIDSVLVLLRLPAWWNDFIAGLVL 272


>gi|84500038|ref|ZP_00998304.1| putative membrane protein [Oceanicola batsensis HTCC2597]
 gi|84391972|gb|EAQ04240.1| putative membrane protein [Oceanicola batsensis HTCC2597]
          Length = 328

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 83/301 (27%), Gaps = 19/301 (6%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
                        +   +     + A G   V+ + G   L+      +      +L + 
Sbjct: 35  FMNPGFVEPTGYMNFLKRAAPLAILAAGQVYVI-TSGGFDLSVGSLITLVVVGSSMLTNN 93

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
              + + ++PV   I    G I GL     R       +LI +      L     + +G 
Sbjct: 94  DPAATYWVVPVMLGIGVGVGAINGLIVCFLRVP-----SLIATLGMMITLNGLAFLWSGG 148

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
           A                +   F R     V    F+   ++ +  +       + RT + 
Sbjct: 149 APRGYLP---------DTFRFFGRELIRDVPLVRFIPVSVIVLVVVVGLFAWLMHRTNLG 199

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                I DN  A       +   +++AF +S     +AG          +     +    
Sbjct: 200 RQVHAIGDNPVAARLAGVAVNRVRITAFVLSGLSGAIAGILLGGFAGVSTDVGTGYELQA 259

Query: 268 IVISIV----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           I  +++    +LGG  S+         L  +  L   +        +             
Sbjct: 260 ITAAVLGGAQLLGGRGSVPAAFGGALALTAIFTLLNFLGLPQPVRQVVQGLILIAAVALA 319

Query: 324 M 324
           M
Sbjct: 320 M 320


>gi|148258977|ref|YP_001243562.1| sugar ABC transporter membrane protein [Bradyrhizobium sp. BTAi1]
 gi|146411150|gb|ABQ39656.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Bradyrhizobium sp. BTAi1]
          Length = 330

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/314 (11%), Positives = 87/314 (27%), Gaps = 25/314 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              +L +  V+  ++  L      S     ++G Q  +  + A G++ ++     + L+ 
Sbjct: 31  RPYMLYIAFVILLVVFSLSSPWFLSVDNFLNIGRQTTLVSIIAVGMTFII-IARQIDLSV 89

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A+   +  +  S+   S  +            G++ G+ + +              
Sbjct: 90  ASTLALSGMAAALAMSQINNSWIVGAVAGLGTGALVGLLNGILTTQLSIPSF-------- 141

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                       +T G   +     +    T    +     F        + +   +   
Sbjct: 142 -----------LVTLGSLSMARGLAMMVTNTKPVIITNETYFAIFGEGTLLGIPVPIAWT 190

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                  IL L           +  N  A             +AF ++    G+A    +
Sbjct: 191 LAAMIVGILLLHYNVFGRRIYAVGGNPTAALYSGINTKLITTAAFVLTGTLAGLAALVLS 250

Query: 251 ASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A      PD+ +  E  ++ +++     + GG   +      + I+  +      +    
Sbjct: 251 ARSHAARPDVVQGMELDVIAAVILGGCSLFGGRGYILGTLFGSLIIGTLNNGLVLLGVSS 310

Query: 306 FNSLLKFDCSFNMR 319
              L+         
Sbjct: 311 PMQLVIKGAIIVAA 324


>gi|229591426|ref|YP_002873545.1| putative sugar transporter permease [Pseudomonas fluorescens SBW25]
 gi|229363292|emb|CAY50397.1| putative sugar transport system, permease protein [Pseudomonas
           fluorescens SBW25]
          Length = 330

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 90/302 (29%), Gaps = 29/302 (9%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI-GAYSYVILG 85
            L      +   + ++  Q+ I  + A G++ V+   G + L+     A+ G  +  ++ 
Sbjct: 46  ILASDTFLTASNLSNIARQVSINAIIAVGMTCVI-LTGGIDLSVGPVMALSGTLTAGLMV 104

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           +     + +   +   ++   G  + +  L      + +AT+ ++     +     PI+ 
Sbjct: 105 AGLPPGLAIGAGMLIGVAFGIGNGLFVAYLHMPPIIVTLATMGIARGLGLMYTDGYPISG 164

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                    R    G  V                       +L M     +  + L+ T 
Sbjct: 165 LPDWFAFFGRESLFGIQVP----------------------ILIMLLTYLAAYVLLQHTR 202

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           I      I  N++A           KL  + +S     +AG    +      P+     E
Sbjct: 203 IGRYIYAIGGNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQPNAGVSFE 262

Query: 266 NIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              + ++V     I GG   +        +L  +      +    +   +       +  
Sbjct: 263 LDAIAAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKGGIILLAI 322

Query: 321 TT 322
             
Sbjct: 323 FI 324


>gi|302866452|ref|YP_003835089.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029]
 gi|302569311|gb|ADL45513.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029]
          Length = 326

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 84/319 (26%), Gaps = 26/319 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +    Y   +    V     +        +   + ++ IQ     + A GL  V+   G 
Sbjct: 19  INWRDYVVYIGFAVVFLFFAITQGGNGFLTTSNLTNIVIQTAPITIMAVGLVFVLA-AGE 77

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+ A    +        +  +    A  +    +     +L     +L   
Sbjct: 78  IDLSIGSVVALSALVGAVTMRETDSMLLGVAAGLAAGAAVGLVNGVFVTLVRLPSFL--- 134

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                            +T    G          G     +              + +  
Sbjct: 135 -----------------VTLATMGAVAGLAREVTGLQSVPVSNDAFLSFFGQGEILGIPG 177

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++L     +    L LR+T        I DN  A       +I  K+     S+    +A
Sbjct: 178 LVLWSVAAAVVGYLVLRQTRYGAHTLAIGDNVAAARVSGIKVIRVKIMVLMGSAMCAALA 237

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G  +A         + +     ++ ++++      GG  S+      + ++  +      
Sbjct: 238 GLLYAGRLQGARYTLGEADLMSVIAAVIVGGTSLFGGKGSIIGAVLGSLLMGMLNNGLIL 297

Query: 301 MNFYYFNSLLKFDCSFNMR 319
                   ++       + 
Sbjct: 298 AGLSVSQQMMARGAIILVA 316


>gi|167772575|ref|ZP_02444628.1| hypothetical protein ANACOL_03953 [Anaerotruncus colihominis DSM
           17241]
 gi|167665053|gb|EDS09183.1| hypothetical protein ANACOL_03953 [Anaerotruncus colihominis DSM
           17241]
          Length = 324

 Score = 54.5 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/316 (11%), Positives = 95/316 (30%), Gaps = 30/316 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ VV  +              + ++  Q+ + ++ A+G  +++   G L L+     
Sbjct: 14  IYIVLVVLFIACSFISPYFLQSNNLINVARQLSVGILIAYGEMLLI-ISGFLDLSVGSVL 72

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+     V +          +    A+  G                   +   I +   Q
Sbjct: 73  ALSGVLSVSVYKSTQSFTAAIAVALAVAVGC------NLVNALFVANFKVPAFIATLGMQ 126

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +         G                  ++++   F          +   ++ +  +S
Sbjct: 127 QVARGLALYYTGGQ----------------NILQLGNFVKIGQGAVGPIPVPVIIVICIS 170

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I   +  T        I  ++ A  +       +   ++ ++   IG+AG  F A  +
Sbjct: 171 VVIWYIVNNTRYGRGLYAIGGSRSAAEASGINTKKSIYKSYIINGILIGIAGMIFMARNN 230

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVEL--CCGMNFYYFN 307
              P+     E   + + ++      GG+ ++S       I+  +  +    G+N Y   
Sbjct: 231 SGLPNGAVGYEMTGLTAAIVGGTSFTGGIGTVSGTIAGAFIIGFLENVMNLAGVNPYIQQ 290

Query: 308 SLLKFDCSFNMRHTTL 323
            +  F     +    +
Sbjct: 291 IIEGFIIVLAVAFDVV 306


>gi|226323053|ref|ZP_03798571.1| hypothetical protein COPCOM_00825 [Coprococcus comes ATCC 27758]
 gi|225208620|gb|EEG90974.1| hypothetical protein COPCOM_00825 [Coprococcus comes ATCC 27758]
          Length = 341

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/315 (11%), Positives = 97/315 (30%), Gaps = 12/315 (3%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           IL  + +    ++          +   ++ I     ++ A G +IV+ + G + ++    
Sbjct: 23  ILLFVVMYAAGMIVFNDKGFAKPQMFLNLFISNAGLLVIAMGETIVMITAG-IDISVGSV 81

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            A+           +G S +  + ++ +I    G++ G            +    M    
Sbjct: 82  TALVCMVAANQMENHGASAYTALLMALVIGLLFGLVQGFLVSYLEIQPFIVTLAGM---- 137

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
                +          I + +  +      +  + F  +         ++Y  ++    +
Sbjct: 138 --FFGRGMTSIISTDMISIKNATFMAWAKYKIYMPFGSYSKRGKFLPAYIYPTVIIAIIV 195

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              II+ ++ T    +   I  N+++   +   +   K++A+ +     G+ G  F  + 
Sbjct: 196 LIVIIIVMKYTKFGRSVYAIGGNEQSALMMGLNVKRTKMAAYLLDGFLAGLGGFLFCMNS 255

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                +  K  E   + + VI      GG+ +         I   +  L           
Sbjct: 256 CAGFVEQAKGLEMDAISAAVIGGTLLSGGVGTPFGTLFGVLIKGTISSLITTQGTLSSWW 315

Query: 309 LLKFDCSFNMRHTTL 323
           +     +       L
Sbjct: 316 VRIVLSALLCFFIVL 330


>gi|197244416|emb|CAQ64721.1| sugar ABC transporter, permease protein [Streptomyces lasaliensis]
          Length = 341

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/318 (14%), Positives = 95/318 (29%), Gaps = 30/318 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              + V   L+      +  +     ++ +Q     + A G+++V+   G + L+    +
Sbjct: 39  AFAVLVALVLVSTFVFPSFGTLDNAQNVAVQASFIAVVALGMTLVI-ITGGIDLSVGSVF 97

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+G               W  + +  ++ GA G + GL   +                  
Sbjct: 98  ALGGVLAAWASQYG---FWAALLLPLVVCGAIGTLNGLLIARAGMAPF------------ 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                   +        +   L   G T   + R   F            Y +L    L 
Sbjct: 143 -----IVTLATLLGARGLLLALTHEGATTYLVPRDSAFAELGQGTLGGFGYPVLVALALF 197

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A   + L+RT+   +   +  +  A   +   +   ++  + +S    G AGA  AA   
Sbjct: 198 AVGGVVLQRTSFGQSLFAVGGSADAATLMGLPVARTRVLVYLLSGLLAGFAGALNAARLS 257

Query: 255 RISPDMFKFSENIIVISIVILGGM---------TSLSKIAKATAILIGVVELCCGMNFYY 305
                +    E   + ++VI G +          +L  +     I   + ++    + Y 
Sbjct: 258 SGVTIIGSGMELDAIAAVVIGGTLLTGGAGSVSGTLWGVLLLAVIQNLINQIGSLNSSYQ 317

Query: 306 FNSLLKFDCSFNMRHTTL 323
                 F     +    L
Sbjct: 318 SVVSGGFLIVVVVAQRYL 335


>gi|110803947|ref|YP_698663.1| beta-methylgalactoside transporter inner membrane component
           [Clostridium perfringens SM101]
 gi|110684448|gb|ABG87818.1| galactoside ABC transporter, permease protein [Clostridium
           perfringens SM101]
          Length = 342

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 91/314 (28%), Gaps = 7/314 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ VV  + + +      S K   ++  Q    ++ A G+  ++ + G   L+     
Sbjct: 21  IYIVLVVLLIGICIISLDFLSLKNFINILSQSSSRIIIALGVGGILLTEG-TDLSAGRTV 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     L      +  +   +  +      +I              + +      F 
Sbjct: 80  GLAAVVSASLLQAGDYAYKMYPNLPELPIFIPILIAMAVCGIVGLVNGLVVSKFNVPPFI 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE-IFMYYVLLGMCFL 193
             L     I    +  +       +     S         S  IY  I + Y+++    +
Sbjct: 140 ATLGMMTGIYGLNSIYFDRPPYGAMPIGGLSRSFSNFTLGSIPIYGNIKIPYLVIYAIIV 199

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
            A I     +T        I  N++A       ++   L  + ++    G AGA  A   
Sbjct: 200 IAVIWTLWNKTKFGKNLYAIGGNREAAVVSGVNVVRTLLLVYMLAGVLYGFAGALEAGRV 259

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              +    +  E   + S V+      GG+ ++  I     I   +      +    +  
Sbjct: 260 GSATASTGEMYELDAIASCVVGGVSTAGGVGTVPGIVTGVLIFQVINYGLAFIGVSPYLQ 319

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 320 FVIKGLIIVLAVAL 333


>gi|94986940|ref|YP_594873.1| branched chain amino acid ABC transporter, permease protein
           [Lawsonia intracellularis PHE/MN1-00]
 gi|94731189|emb|CAJ54551.1| branched chain amino acid ABC transporter, permease protein
           [Lawsonia intracellularis PHE/MN1-00]
          Length = 297

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 84/276 (30%), Gaps = 11/276 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +      +Y + A G ++V G L  ++        +GAY      + + L   + I +
Sbjct: 10  FFNALTLGSLYGLIAIGYTMVYGILRFINFAHGDLLMLGAYCLFYGTTLFLLPWKISIII 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       GM++   + +   D    + LI +      +     +               
Sbjct: 70  AIFGVSLIGMLIDQVAYRPLRDAPRTSILISAIAVSFFIESSAVVLFSGL---------- 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                +       F  S +        V +   FL  +++  + +T    A R I  + +
Sbjct: 120 PRPVFQPEWLISPFSISKIRILPLTLIVPIVSFFLVLALLWIIYKTKFGLAMRAISKDIE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   I       FA+ SA    +G  ++    +I+P M             +LGG+
Sbjct: 180 TTRLLGVPINRIIALTFALGSALAAASGIMWSLRYPQINPYM-GVFPGFKAFIAAVLGGI 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            S+        +L  +  +              F  
Sbjct: 239 GSIQGALIGGLLLGFIEIMTVAFLPTLSGYRDAFAF 274


>gi|256851051|ref|ZP_05556440.1| D-ribose ABC transporter permease [Lactobacillus jensenii 27-2-CHN]
 gi|260661263|ref|ZP_05862177.1| D-ribose ABC transporter permease [Lactobacillus jensenii
           115-3-CHN]
 gi|256616113|gb|EEU21301.1| D-ribose ABC transporter permease [Lactobacillus jensenii 27-2-CHN]
 gi|260548200|gb|EEX24176.1| D-ribose ABC transporter permease [Lactobacillus jensenii
           115-3-CHN]
          Length = 311

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/320 (12%), Positives = 89/320 (27%), Gaps = 23/320 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           ++    +  +  ++  +L+        +   + ++  Q  I  + A+G++ V+   G + 
Sbjct: 1   MDLSKYMALIALIILVVLITFLNPQFIAPSNLMNLLRQSSINCLIAFGMTFVI-LTGGID 59

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A        L           I    + +   G+   L S      Y  +   
Sbjct: 60  LSVGSVLAFTGAVAATLILSGTPVWLACIACLILGAILGGVNGFLIS------YGKVTAF 113

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I +     I      +  G   I   +               F  P   +I  +      
Sbjct: 114 IATLATMTIWRGATYVFTGGNPITGPNMNNSFFFQFIGNGYLFGIPFPVIITLLIF---- 169

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                  A++ + L +TA       +  N+KA F          +  + +S     +A  
Sbjct: 170 -------AAVYILLHKTAFGRKTFALGGNEKAAFVAGVKTKKIIVLIYIISGVLAALAAL 222

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
              +      PD     E   + S VI     +GG   +        ++  +      + 
Sbjct: 223 ILTSRLSSAQPDAGSAYEMDAIASAVIGGASLMGGKGRMQGTLVGALLIATLSNGMNLLG 282

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F   +       +    
Sbjct: 283 INSFYQQIVKGLVILVAVMI 302


>gi|197284003|ref|YP_002149875.1| ribose ABC transporter permease [Proteus mirabilis HI4320]
 gi|227358127|ref|ZP_03842468.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Proteus mirabilis ATCC 29906]
 gi|194681490|emb|CAR40346.1| ribose ABC transporter, permease protein [Proteus mirabilis HI4320]
 gi|227161463|gb|EEI46500.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Proteus mirabilis ATCC 29906]
          Length = 321

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/299 (10%), Positives = 82/299 (27%), Gaps = 23/299 (7%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                 +   I ++  Q  +  + A G+++V+ + G + L+     A+       +    
Sbjct: 37  LSPNFFTLNNIFNILQQTSVNAIMAVGMTLVILTSG-IDLSVGSLLALTGAVAASMVGAD 95

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
             ++  ++   A+ +   G+   + +                + F   L+    +     
Sbjct: 96  VNALVAVVGALALGAAIGGVTGVIIAK------------GKVQAFIATLVMMLLLRGVTR 143

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                  +    +    L  +F     F I       +++ +             T +  
Sbjct: 144 VYTDGSPINTGFSDNADLFSWFGIGRPFGIPTPIWLMMIVFLSAWYVL-----HHTRLGR 198

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               +  N+ A      ++   K+  +A+      +A     A      P      E   
Sbjct: 199 YIYALGGNEAATRLSGISVDKIKIIVYALCGLLAALASVIEVARLSSAQPMAGNGYELDA 258

Query: 269 VISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + ++V     + GG   +        IL  +      +       ++       +    
Sbjct: 259 IAAVVLGGTSLAGGKGRIMGTLIGALILGFLNNALNLLGISSNYQMIVKAVVILLAVLV 317


>gi|138894504|ref|YP_001124957.1| methylthioribose ABC transporter permease [Geobacillus
           thermodenitrificans NG80-2]
 gi|196247895|ref|ZP_03146597.1| Monosaccharide-transporting ATPase [Geobacillus sp. G11MC16]
 gi|134266017|gb|ABO66212.1| Methylthioribose transport system permease protein [Geobacillus
           thermodenitrificans NG80-2]
 gi|196212679|gb|EDY07436.1| Monosaccharide-transporting ATPase [Geobacillus sp. G11MC16]
          Length = 337

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 103/320 (32%), Gaps = 15/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L K+  +L +LAV+    +        + +    +   I I  + A G++  +   G   
Sbjct: 22  LYKHGTLLAILAVIAYFGI--TQDQFFTYENFSDILRSISIVTLVAIGITFSLIVDG-FD 78

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     ++   +       Y   I++ + V  ++  A G++  L  +KF+   L +ATL
Sbjct: 79  LSVGSTVSLATIASAAALVLYRQEIFVTLLVPLLLGIAVGLLNSLLIVKFKLPDL-LATL 137

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                   + + +        G  + + +               F          + + +
Sbjct: 138 ATMYAINGVQLTYTK------GFSIYNDMPLPDGGTAPGKFIPSFLFIGQGELFGIPFSV 191

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L M F+  +  L+L  T     +    +N++A       +   +  A+ +S  F  + G 
Sbjct: 192 LLMLFVVIAAHLFLTYTKPGRLFYLTGENREAARLSGIPVNRYRTYAYVISGFFAALGGI 251

Query: 248 FFAASRDRISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMN 302
             A+                 V +      V   G  ++      + ++  ++     MN
Sbjct: 252 VLASRIGTGQVSAGASFLMDGVAAAYIGFSVFGAGKPNVIGTLFGSILMGVLLNGLTMMN 311

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
             Y+   +            
Sbjct: 312 VPYYAQDIIKGAILVGALAL 331


>gi|121607329|ref|YP_995136.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121551969|gb|ABM56118.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 327

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 49/335 (14%), Positives = 113/335 (33%), Gaps = 18/335 (5%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           ++    L L+  +  L+L L            +     +I  + A GL++V G + +L+ 
Sbjct: 5   DRDWAPLALVPALALLVLPLIGSPGTWLTLTVAGLAMGMIIFIIASGLTLVFGLMDVLNF 64

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL--AIAT 126
              +   +GA+    +    G           +++    M++ +      G      I  
Sbjct: 65  GHGLFITLGAFIASTVLGAMGDWTGSEQLWRNLVAVLSAMLVAMAVAAAVGLAFERCIVR 124

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
            +  +  + ILI    +  G+  I +      +   +   +R         I +  +  V
Sbjct: 125 PVYGQHLKQILITMGGMIIGEELIKLIWGPAQIPLPLPEGLRGALLMGDAAIEKYRLVAV 184

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            +G+    A +   L RT +    R    +++   +L   I    ++ F + SA  G+ G
Sbjct: 185 AVGLLVFGA-LAWMLARTKLGLLIRAGVQDREMVEALGYRIRRLFVAVFVLGSALAGLGG 243

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             +   +  + P M     N+++  ++I+GG+ +         ++  V      +     
Sbjct: 244 VMWGLYQQYLVPQM-GTQVNVLIFIVIIIGGLGATGGALIGALLVGLVANYTGFLAPKVA 302

Query: 307 NSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                             +  +  ++L R   L  
Sbjct: 303 LFSN--------------IALMAAILLWRPQGLYP 323


>gi|86359569|ref|YP_471461.1| sugar ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86283671|gb|ABC92734.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           CFN 42]
          Length = 341

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 47/319 (14%), Positives = 90/319 (28%), Gaps = 26/319 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + L+ V   L+          Q ++ +      M +Q+ +  + A G++ V+   G + L
Sbjct: 27  IFLVLVGIALIYEALGWTFIGQSFLMNSQRLTIMILQVSVIGIIAVGVTQVI-ITGGIDL 85

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +      + A                              +  LP+L      L I    
Sbjct: 86  SSGSVVGMTAMIATSFAQSSTWG-----------RAVFPSLTDLPALVPIMIGLLIGAAA 134

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                  I     P      G++V+ R      T    +        F+  + +   V L
Sbjct: 135 GLANGALIAYTKIPPFIATLGMFVSARGVAKWYTKGQPVSGITEQFHFIGTKAWPVVVFL 194

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +        + LR T        I  N +A       I    +  + ++    G+AG  
Sbjct: 195 VVA---LIFHVALRYTRYGKFTYAIGANPQAARVSGINIEAHLVKVYVIAGLLAGLAGIV 251

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            AA  +     M    E   + + VI      GG+  ++     T IL  +      +  
Sbjct: 252 TAARAETAQASMGVGYELDAIAATVIGGTSLTGGVGRITGTVIGTIILGVMTSGFTFLRI 311

Query: 304 YYFNSLLKFDCSFNMRHTT 322
             +   +            
Sbjct: 312 DAYYQEIVKGFIIVAAVVI 330


>gi|110636032|ref|YP_676240.1| inner-membrane translocator [Mesorhizobium sp. BNC1]
 gi|110287016|gb|ABG65075.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Chelativorans sp. BNC1]
          Length = 335

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 87/313 (27%), Gaps = 28/313 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++ V+             + + + ++  Q    ++ A G+  VV     + L+     A
Sbjct: 36  LVIFVLLVAAAAYISTDFLTLRNVMNLLRQASTTIIMAIGMLFVV-LTRGIDLSIGSVLA 94

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +G     +L       +   I V+ +    CG+  G      R     I           
Sbjct: 95  VGGVIAALLA--PEWGLPASIAVALVAGLICGLACGTLIAYLRLPPFVIT---------- 142

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             +    +  G A I    +   L      L  F       V Y + +   ++ +     
Sbjct: 143 --LAMMTVARGSAFILTGGQPIMLNDAASGLSAFAGGYIGPVPYPVLLMAAIVLLGTFVL 200

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T+     + I  N++A            ++ + +S     +AG         
Sbjct: 201 MF------TSFGRLVKAIGSNEEAVRLSGIRTQRYIVAVYVISGFMAALAGVLITGRTG- 253

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSK------IAKATAILIGVVELCCGMNFYYFNSL 309
           +          + VI+ V++GG + +              IL  +  +    N   +   
Sbjct: 254 VGAPNVGVGFELQVIAAVVIGGASLMGGRGDALNTVLGALILAIIGNIMNLSNVPGYTQQ 313

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 314 VIMGAVIVAAVIL 326


>gi|288961428|ref|YP_003451767.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288913736|dbj|BAI75223.1| branched-chain amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 295

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 95/305 (31%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+L+          A ++V L  R       ++  
Sbjct: 10  LVGGLLSGVMYSLVAIGFVLIYKTSGVLNFAQGALLLFAALTFVSLAERGLPFWAAILLT 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A ++    +I                 +    +   I    + +               
Sbjct: 70  LAAMTLIGALIERTVLRPLVNQPPITLFMATLGVSYVIEGAAQLLWG------------T 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         V+   F  +       + A++ L+ R T I   +R + D+Q 
Sbjct: 118 QVHGLDLGIDDLPLEIGGVLISSFDLFAAAVAGAMVAALTLFFRYTRIGLGFRAVADDQL 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++  ++     + +  +     +AG  + A               +  + +++LGG 
Sbjct: 178 AALAVGLSLDRIWTAVWTAAGVVALVAGLLWGARLGVQFSLS---LVVLKALPVLVLGGF 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++       I+  V +L       +    ++           +  +A    +L+R   
Sbjct: 235 DSIAGAIVGGLIVGAVEKLAEVYLGPFVGGGIEGW---------IAYVAALGFLLIRPSG 285

Query: 339 LLRLR 343
           L   +
Sbjct: 286 LFGAK 290


>gi|239945952|ref|ZP_04697889.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998]
 gi|239992422|ref|ZP_04713086.1| ABC transporter permease [Streptomyces roseosporus NRRL 11379]
 gi|291449407|ref|ZP_06588797.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998]
 gi|291352354|gb|EFE79258.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998]
          Length = 330

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 97/300 (32%), Gaps = 29/300 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  ++D ++  L +V  LL F F+    +   +  +    L   + A  ++++V   G +
Sbjct: 8   RAVRWDTVVGALLIVVLLLSFGFVDGFGNALNLSFLIGNTLPIALIALPMTLLV-VSGEI 66

Query: 67  SLNCVIAYAI-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
            L+      + GA    +      +   + + +   +       + +  L      + I 
Sbjct: 67  DLSVASTAGLSGAVMGALWNQGLPIEAIIPVCLLLGVVCGLVNGLLVTRLGLPSLAVTIG 126

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL        I++    +                          +   ++  I + F+ Y
Sbjct: 127 TLAAYRGIAQIVLGSDAV--------------------TDFPSPYLDFAAGRIGDTFVPY 166

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
             L    L A  +L L  T    +      N++A       +   KL  F V+     + 
Sbjct: 167 AFLPFLALLAVAVLALHATPFGRSLFATGANEEAARFAGVRVKRQKLILFTVTGLMASLT 226

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCC 299
           G F+A        D       + V++ V+LGG+       +L        +L  +  +  
Sbjct: 227 GVFWALHYASARFDNAT-GLELSVVAAVLLGGIDFDGGKGTLGGAIAGVFLLGALQNVMS 285


>gi|322834184|ref|YP_004214211.1| inner-membrane translocator [Rahnella sp. Y9602]
 gi|321169385|gb|ADW75084.1| inner-membrane translocator [Rahnella sp. Y9602]
          Length = 329

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 102/323 (31%), Gaps = 20/323 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LR +  +  L  + +V  +   L      + + +  +     +  +FA GL  VV   G 
Sbjct: 7   LRPSSNEGYLAWVLLVVIVTFSLLTNQFLTLQNLLDLTESYAVSGIFALGL-FVVLVTGG 65

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + ++     ++  Y    L   YGLS      + A+  G    ++    +        I 
Sbjct: 66  IDISFAAVASVVQYLIATLAIHYGLSSPTGSILLAVAIGTVLGMINAILIYCLRIVSIIV 125

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           T+ M  +   +L+          G  + D   +L T +R L          +   + +  
Sbjct: 126 TISMQSLLFGMLMWL------TNGTSLYDLPDWLTTPIRVLPFSVGEQHYQIGLPVVVML 179

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            + G+ ++         +T +      +  +Q++   +   +    L A+    A   + 
Sbjct: 180 AVAGLSWILL------NKTHLGRQLFAVGGDQESARRIGIRVGLLHLFAYGYLGAMAAIG 233

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCC 299
           G         + P+       + V++  +LGG        S+        ++  +     
Sbjct: 234 GLVQVYRVGEVVPNAL-VGGELDVLAAAVLGGASLNGGKGSVVGTLMGVFLIGVLKNGLN 292

Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322
            +    +   +          T 
Sbjct: 293 LIGVSSYFMNIVIGVVIVAAITV 315


>gi|331659538|ref|ZP_08360480.1| ribose transport system permease protein RbsC [Escherichia coli
           TA206]
 gi|315300913|gb|EFU60133.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 16-3]
 gi|331054120|gb|EGI26149.1| ribose transport system permease protein RbsC [Escherichia coli
           TA206]
          Length = 329

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 103/321 (32%), Gaps = 27/321 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           ++ +    +    VV  +L      +  +   I ++ +Q+ I  + A+G++ V+  LG +
Sbjct: 22  KVFRQYGGILGGMVVLIILFSFINDSFFTANNITNIILQVSIIAITAYGMTYVL-LLGDI 80

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+      +  S      ++L+   ++I+     ++        G    I T
Sbjct: 81  DLSVGSTIALIGTFAALGAS--WGIPFVLLVPLSIIAALALGMINGGLTAIAGIPSFIVT 138

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           +    IF+ I                             +I+   F +      +++   
Sbjct: 139 VATMGIFRGIAYIVTDGM-------------------PIMIKDDAFLALGNGEFLYIPIP 179

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  L       L +T           N++A       +   K+  F +++   G++G
Sbjct: 180 IWILIILLLINHFILTKTTFGRKIYITGGNKEAAIYSGINVTRLKIKVFMITAVLAGISG 239

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGM 301
              A+      P+     E   + + V+      GG  ++         +  +      M
Sbjct: 240 MILASRLYSGQPNSALSYELDAIAAAVLGGTSLNGGYGTVVGTVIGALTIGVINNGMNLM 299

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
           N  YF  ++       +    
Sbjct: 300 NVPYFYQMVVKGLVILVAVYF 320


>gi|163746700|ref|ZP_02154057.1| inner-membrane translocator [Oceanibulbus indolifex HEL-45]
 gi|161379814|gb|EDQ04226.1| inner-membrane translocator [Oceanibulbus indolifex HEL-45]
          Length = 342

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/341 (12%), Positives = 94/341 (27%), Gaps = 47/341 (13%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS------------------ 80
           I +   +   Y + A GL+++ G+LG+++      + IGA+                   
Sbjct: 8   ILNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFCSVTLQRLLTLSVETVSET 67

Query: 81  -----------------YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
                                       I   +P++ + +    +++G    +    +  
Sbjct: 68  QKDFLGNPLKVKTPYVENWFGTETGQAIIDWSVPLAILFAIPVMLLIGFIMERGLIKHFY 127

Query: 124 IATLIMSEIFQN-ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
                   +    + I  + +     G                         + + Y  +
Sbjct: 128 KRPHADQILVTFGLAIVLQEVVKYFYGANPIPTPAPEVFKGSFDFAPLLGLDTSLAYPYW 187

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
                     + A++  +L+ T      R    +++    L   I       F +++A  
Sbjct: 188 RLVYFGFSTVIIAAVFAFLQFTTFGMVVRAGMADRETVGLLGIDIDRRFTIMFGIAAAVA 247

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+AG  +A            F     V+ +V    M SL     A  +L  +  L     
Sbjct: 248 GLAGVMYAPINSPNYHMGMDFLVLSFVVVVVGG--MGSLPGAVLAGFLLGILESLASMNE 305

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                  +     + +             +L+R   L+  R
Sbjct: 306 IKSIIYGIDQIIIYVVAIVI---------LLVRPRGLMGRR 337


>gi|158425702|ref|YP_001526994.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158332591|dbj|BAF90076.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 292

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 83/290 (28%), Gaps = 22/290 (7%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+++ G + + +           Y      S + L   L  P++A +    G  + 
Sbjct: 23  IAVGLALIFGLMDVTNFAHGEFLMFAMYITFFCFSWFALDPLLSAPIAAAVLFGFGAFVY 82

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           L  ++F       A    + +    +     +     G+          +   + +    
Sbjct: 83  LAIIRF-------AMRAKTNVGMVQIFATFGLAVVMRGLAQLLFTPDYRSIPHTWLGGKT 135

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                +                   +   +++T    A    R++  A   +        
Sbjct: 136 VSVFGIFLPAPQLAGGAVSILAFVGLFFLIKKTDFGKALEATREDAGAVALVGIDKNKVF 195

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              + + +A +G+AGA  A+            S  +I    V LGG  S+        ++
Sbjct: 196 ALGWGLGAALVGLAGAIMASFFYV--YPDVGASFALIAYVTVALGGFGSVFGAFAGGIVV 253

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             V  +   +      S+              + +   LV+  R   L  
Sbjct: 254 GLVEAMTAMVLPPSLKSVG-------------IYVVYLLVVFFRPRGLFG 290


>gi|153809845|ref|ZP_01962513.1| hypothetical protein RUMOBE_00226 [Ruminococcus obeum ATCC 29174]
 gi|149834023|gb|EDM89103.1| hypothetical protein RUMOBE_00226 [Ruminococcus obeum ATCC 29174]
          Length = 335

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/317 (12%), Positives = 88/317 (27%), Gaps = 18/317 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  +   +      S   I ++   +  Y++   G S V+   G + L+     
Sbjct: 22  AFIGLIIIYIAFGILNPKVFSLLNIQNLLRSMSKYLLIGIGQSFVM-ITGNIDLSIGSVV 80

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     + ++  ++  + I V+ +++   G++ G    KF+          M     
Sbjct: 81  GMSAMISATMMTKG-MNPVVAILVTIILALVVGVVNGYLVGKFKLPPFIATLGTMFV--- 136

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                 + I          D +               F           +++ L +    
Sbjct: 137 -----ARGIAYIVNNNRNTDNIASGIGKEAGDRFQNIFYYGKTAGIFNTFWIALIV---F 188

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                +L RT        I  N  A       ++     A+ VS     + G    A   
Sbjct: 189 LIFWFFLARTRSGRHIYAIGSNVDAARLSGVDVVKTTTKAYMVSGFCSAVVGFVLCAQAG 248

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + D     E   V + VI     LGG   L        +   +      ++       
Sbjct: 249 MGNMDAGNMYEMYGVAAGVIGGVSPLGGSGILLGTFAGAGVWQTLENGLNLIHAQVGFQR 308

Query: 310 LKFDCSFNMRHTTLMVI 326
           +             +V+
Sbjct: 309 IIIGVIVVGAVLLDVVV 325


>gi|26249841|ref|NP_755881.1| ribose ABC transporter permease [Escherichia coli CFT073]
 gi|218691542|ref|YP_002399754.1| putative sugar ABC transporter membrane protein [Escherichia coli
           ED1a]
 gi|227887976|ref|ZP_04005781.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Escherichia coli 83972]
 gi|300991047|ref|ZP_07179468.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 45-1]
 gi|306816406|ref|ZP_07450538.1| putative sugar transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli NC101]
 gi|26110269|gb|AAN82455.1|AE016767_215 Ribose transport system permease protein rbsC [Escherichia coli
           CFT073]
 gi|218429106|emb|CAR09913.1| putative sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli ED1a]
 gi|227835372|gb|EEJ45838.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Escherichia coli 83972]
 gi|300406968|gb|EFJ90506.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 45-1]
 gi|305849971|gb|EFM50430.1| putative sugar transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli NC101]
 gi|307555345|gb|ADN48120.1| ribose ABC transporter [Escherichia coli ABU 83972]
 gi|315294801|gb|EFU54144.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 153-1]
 gi|320194735|gb|EFW69365.1| Ribose ABC transport system, permease protein RbsC [Escherichia
           coli WV_060327]
          Length = 329

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 103/321 (32%), Gaps = 27/321 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           ++ +    +    VV  +L      +  +   I ++ +Q+ I  + A+G++ V+  LG +
Sbjct: 22  KVFRQYGGILSGMVVLIILFSFINDSFFTANNITNIILQVSIIAITAYGMTYVL-LLGDI 80

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+      +  S      ++L+   ++I+     ++        G    I T
Sbjct: 81  DLSVGSTIALIGTFAALGAS--WGIPFVLLVPLSIIAALALGMINGGLTAIAGIPSFIVT 138

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           +    IF+ I                             +I+   F +      +++   
Sbjct: 139 VATMGIFRGIAYIVTDGM-------------------PIMIKDDAFLALGNGEFLYIPIP 179

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  L       L +T           N++A       +   K+  F +++   G++G
Sbjct: 180 IWILIILLLINHFILTKTTFGRKIYITGGNKEAAIYSGINVTRLKIKVFMITAVLAGISG 239

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGM 301
              A+      P+     E   + + V+      GG  ++         +  +      M
Sbjct: 240 MILASRLYSGQPNSALSYELDAIAAAVLGGTSLNGGYGTVVGTVIGALTIGVINNGMNLM 299

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
           N  YF  ++       +    
Sbjct: 300 NVPYFYQMVVKGLVILVAVYF 320


>gi|330953470|gb|EGH53730.1| inner-membrane translocator [Pseudomonas syringae Cit 7]
          Length = 325

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/322 (12%), Positives = 96/322 (29%), Gaps = 27/322 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LRL+     L L+ ++  L+L        + +    +  Q  I  + A G++ V+     
Sbjct: 18  LRLSLDRFGLPLVFILLCLVLAFASEYFMTWRNWMDILRQTSINGILAVGMTYVI-LTKG 76

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A       ++ ++    +  +       +    +   + +      ++A  
Sbjct: 77  IDLSVGSILAFAGLCSALVATQGYGLLAAVSAGMFAGAMLGVVNGFMVANLSIPPFVATL 136

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            ++        ++                     G+ V  L   +       +  I +  
Sbjct: 137 GMLSIARGMTFILN-------------------DGSPVTDLPEEYLALGIGRVGPIGVPI 177

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++  +  L   ++L  R T        +  N+K+  +    +     S + VS    G+A
Sbjct: 178 IIFAVVALIFWMVL--RYTTYGRYVYAVGGNEKSARTSGIGVRKVMFSVYVVSGLLAGLA 235

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G   +A      P      E   + ++VI      GG  S+        ++  +      
Sbjct: 236 GVVLSARTTSALPQAGMSYELDAIAAVVIGGTSLSGGTGSIVGTLFGALLIGVINNGLNL 295

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +    +   +            
Sbjct: 296 LGVSSYYQQVAKGLIIVFAVLI 317


>gi|307298584|ref|ZP_07578387.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915749|gb|EFN46133.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 309

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 101/302 (33%), Gaps = 13/302 (4%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           ++ L+  + + A            +  +Y +    LS+ +G +G+++L      ++G Y 
Sbjct: 13  LFLLIAVIIVVAIWKPHAAIYGLQRGSLYSLVGLPLSLTLGVVGIMNLAHGDFLSLGIYF 72

Query: 81  YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +  +  G+   + I     +    G+++   ++        +  L+++     I+++ 
Sbjct: 73  VYLFATNLGMDPLVSIIPVFFLLFGLGVVIYKLTITRVMKSGHLNQLLLTFGISMIVLEA 132

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +                  +V           + V +  +    ++    +  ++ L+
Sbjct: 133 MNLIW-----------TSRPRSVYVEYSSSSTTIAGVRFGTYELLYVVFAFAVLIALQLF 181

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L++T +  A   +  N +    +     F  L  F +S A +G+A               
Sbjct: 182 LKKTRLGQATFAVGQNPQGAKIVGINTGFVYLFVFGISIAILGIAAGVMVPR--FAIFPS 239

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              +  +    +V + G+ +L  I  +  +L     +   +  Y   S + F        
Sbjct: 240 VGSAFTMKSFCLVAMAGLGNLPGILVSGIVLGVGEAIVQSIPGYAGWSDIVFFGVLIAVI 299

Query: 321 TT 322
             
Sbjct: 300 MI 301


>gi|295095059|emb|CBK84149.1| rhamnose ABC transporter membrane protein [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 334

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/320 (12%), Positives = 91/320 (28%), Gaps = 23/320 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L   + +L  + V+  + +   + +  +   +  M     I ++ A G  +V+     + 
Sbjct: 6   LKHREALLGAVIVLMVVAIGSRVPSFIAPGNLVEMFNDTAILIVLALGQMMVL-LTKGID 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+      ++   Y       + + A   G     +    +   G    + TL
Sbjct: 65  LSMAANLALTGMIVALINFHYPDVPVWALLILASALGLLMGAINGLLVWKLGIPAIVVTL 124

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I++ ++                  L   G  V S      F        + +  + 
Sbjct: 125 GTMSIYRGMIF-----------------LLSGGGWVNSNQMGADFLGLPRASVLGLPVLS 167

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                +   +  +LR +    A  T   N  A +         +  +F +S    G  G 
Sbjct: 168 WCAIAVLLLVGYFLRYSRTGRALYTAGGNATAAYYTGINAGKMQFISFCLSGLLAGFCGY 227

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
            + +       D+    E  +V + VI     +GG   +         L  +      + 
Sbjct: 228 LWISRFAVAYVDVANGFELQVVAACVIGGISTMGGTGRVLGCLFGALFLGVINNALPVIG 287

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F  +        +    
Sbjct: 288 VSPFWQMAISGSVIVIAVLL 307


>gi|294085026|ref|YP_003551786.1| inner-membrane translocator [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664601|gb|ADE39702.1| inner-membrane translocator [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 301

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 97/294 (32%), Gaps = 14/294 (4%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L        + + I        ++ + A+GL++V G + + +L       +G Y   +  
Sbjct: 7   LLFVWAPVINIQIILEGIFVGAVFALSAYGLALVWGVMNIKNLAQGDFVIMGGYM-ALAL 65

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           +   + + L + +  +     G I+ +  ++   D     +L+ +     ++ +   +  
Sbjct: 66  TSADVHLALTMAIVIVSMFIYGWIVYVVMIRRIIDQDMFVSLLATFGLSLLMQQVMNLIF 125

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G               T+   +  +      V         L+    ++  +IL+++++ 
Sbjct: 126 GPE-----------VQTIDMELPVYEAFDGMVTIPSSKIISLIMAAVIAIVVILFMKKSR 174

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
              A R    + +A   L           FA ++A  G AG   +     +    +  + 
Sbjct: 175 TGQAIRATAQDARAARVLGIDTDRVYAFTFAFNAALCGAAGVLVS--IIWVIQPFYGITY 232

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           ++   +IV   G+ +L  +  A   +    +    +    +           + 
Sbjct: 233 SVRTFAIVTAAGLGNLPGVITAGFGIGLFEKYTGMILGTAYEVAAPVSILLLVL 286


>gi|91790963|ref|YP_551914.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91700843|gb|ABE47016.1| inner-membrane translocator [Polaromonas sp. JS666]
          Length = 274

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 96/297 (32%), Gaps = 26/297 (8%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           ++  +   GLSI +G +  ++L       +G Y+   L +R+G+  +  +  + + +   
Sbjct: 1   MLLFLIGVGLSITMGLMNFVNLAHGTFAMVGGYAASALMNRFGMDFFPSLAAAFVAAALA 60

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G ++     +       +  +++S     + +       G      +             
Sbjct: 61  GAVLEFFFYRRLYRAHPLDQVLLSIGIVFVSVAVFTYFFGPTMQPFSLPP---------- 110

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
           I   R     +    +  +++L    + A ++L L +T      R   DNQ+        
Sbjct: 111 ILDGRVSLLGLEVGRYRLFLILCGVLVLACMLLVLGKTRYGAMVRAAVDNQRVAGGTGIH 170

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +       F++             +         F     +  + +V +GG  +++    
Sbjct: 171 VQRLFFLTFSLGCGL--AGLGGALSLGMLGLEPSFPLKYLVYFLIVVCVGGAGTITGPFV 228

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
           A  ++  +                            L+ + + +++L+R + ++  +
Sbjct: 229 AALLVGVIDVAGKYY--------------LPEAGAFLIYVVMIIMLLVRPNGIIPRK 271


>gi|311109157|ref|YP_003982010.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310763846|gb|ADP19295.1| inner-membrane translocator 63 [Achromobacter xylosoxidans A8]
          Length = 286

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 85/302 (28%), Gaps = 26/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   +Y + + GL++V G + +++        +G +         GL   L   +
Sbjct: 7   LVDGILLGGVYAVISIGLTLVFGVVSIVNFAQAEFLMVGMFVAYFAWKLLGLDPLLGSLL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S  ++   G++     +       A+A + ++     ++     I  G            
Sbjct: 67  SFAVAFVLGVLTQKYLINRVLKAPAVAQIFLTVGLLIVMENLALILFGSEFRS------- 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V++  +        ++                 ++   L++T    A R    +  
Sbjct: 120 ----VQTPYQMTALAVGPILLSAPYLLAFAVASVAGLALWWVLKKTWWGMAVRATAQDPM 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A      +       AF +      + G                   ++++ + V+LGG+
Sbjct: 176 AARLSGISTHRVHQLAFGLGVGMTALGGGIILPYLTA--STTVGAQFSVLMFTAVVLGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+                  G         L             +     LV+ +R   
Sbjct: 234 GSVI-------------GAVVGGVAVGVIQSLSSLALPMQLQNLALFAIFILVLAVRPEG 280

Query: 339 LL 340
           LL
Sbjct: 281 LL 282


>gi|227820496|ref|YP_002824467.1| branched-chain amino acid ABC transporter [Sinorhizobium fredii
           NGR234]
 gi|227339495|gb|ACP23714.1| putative branched-chain amino acid ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 292

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 88/306 (28%), Gaps = 25/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             S      IY + A G +++  +   ++        + A+  +      GLS  L + +
Sbjct: 8   FVSGLATGSIYALAAIGFTLLWQASQTINFAQGEFIMLPAFFVLAGTQFLGLSFPLAMAI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++S     +     +        +  ++++ I   IL+K        A       L+ 
Sbjct: 68  ALVLSLLLLGLGFKRIIIDPLLPHGVLPIVIATIALGILMKEGVKQFYTAEALPFPALFS 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T                   +    VLL      A + L+L  T I    +    N  
Sbjct: 128 DRT----------LNVFGAAISVQDIAVLLIALGAVALLQLFLNGTKIGRCMQATAQNPN 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +    L  F ++++   +A    +     ++      +  +I     I+GG 
Sbjct: 178 VAEILGVPVRRMILYTFLINASLAFLASVLISP--IYLAKFSNGETLGLIAFIAAIVGGF 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        ++  +  L        + S +       +               +R   
Sbjct: 236 NQIRGALAGGLLIGVIDNLSAAYVSASYRSAVPLILLIIIIL-------------VRPQG 282

Query: 339 LLRLRT 344
           LL    
Sbjct: 283 LLGKAE 288


>gi|157147986|ref|YP_001455305.1| hypothetical protein CKO_03793 [Citrobacter koseri ATCC BAA-895]
 gi|157085191|gb|ABV14869.1| hypothetical protein CKO_03793 [Citrobacter koseri ATCC BAA-895]
          Length = 331

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 95/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + V+   +         ++  + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 30  ILPILVLIVAVFGFIAPNFFTESNLLNITRQASINIVLAAGMTFII-LTGGIDLSVGSIL 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A     +         +L   +A++ G    ++    + F G    I TL      +
Sbjct: 89  GTTA--VAAMVVSLIPEFAMLSIPAALMLGLGLGLINGALVAFAGLPPFIVTLGTYTALR 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                          +     F      Y   + ++++    + 
Sbjct: 147 GAAYLLAD-------------------GTTVINSNISFEWIGNNYLGPIPWLVVIALAVI 187

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 188 VLCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGVMSASRLY 247

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 248 SANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 307

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 308 VIKGAVIIIAVLI 320


>gi|126724810|ref|ZP_01740653.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2150]
 gi|126705974|gb|EBA05064.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2150]
          Length = 332

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/327 (11%), Positives = 102/327 (31%), Gaps = 33/327 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA-------------------- 78
           + +  +  ++Y + A G  ++  S G+ +    +     A                    
Sbjct: 12  MINGLMAGVLYALVALGFVLIFKSSGIFNYAQGVFALFAALTLVGLQEGQIPFSHLINAI 71

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           +   I    + +   + I ++  +     +++    L+   +   I   + +      + 
Sbjct: 72  FGTHIHHFGWHIHSVIAIAMTVAVMVLLAILVERYILRHLVNQPDIILFMATIGLAYFME 131

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            +  +  G     +   L   G+        +    +F  + I    ++  +      + 
Sbjct: 132 GFGDLMWGSEIKTLDIGLPQGGSFWIEENTAWLGGENFYGFFIDRLDIVAAIVAAILVLA 191

Query: 199 L--WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           L  + + T    A R + D+ +A  S+  ++ +  +  +A++     +AG  + +     
Sbjct: 192 LTLFSQYTKQGRALRAVADDHQAALSVGISLRYIWVLVWAIAGIVALVAGIMWGSKSGVQ 251

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
                     +  + +++LGG TS+        I+    +L        F      +   
Sbjct: 252 FSLS---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFTIGAPFLGGATENW-- 306

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLR 343
                    +   L ++ R   L   +
Sbjct: 307 ------FAYVLALLFLVFRPQGLFGDK 327


>gi|323358507|ref|YP_004224903.1| ribose/xylose/arabinose/galactoside ABC transporters, permease
           components [Microbacterium testaceum StLB037]
 gi|323274878|dbj|BAJ75023.1| ribose/xylose/arabinose/galactoside ABC-type transport systems,
           permease components [Microbacterium testaceum StLB037]
          Length = 350

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/328 (10%), Positives = 102/328 (31%), Gaps = 27/328 (8%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           + F+    +   ++  L V++ +      G   +   +  +  Q  I  + A  +++V+ 
Sbjct: 32  AFFAGSAGRNIGLVIALLVMFVVGAITAPGTFLTLDNVFVILRQASIVGVIAVAMTLVI- 90

Query: 62  SLGLLSLNCVIAYAIGAY--SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
             G + L+      + +   +  ++        W++  + A+  GA   ++    + +  
Sbjct: 91  IAGGIDLSVGSVTGLASVVGTLAVVQDLADSMHWIVFVLLALAVGAVAGLINGVVIAYGN 150

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
               +ATL M    + +                             +++   F +     
Sbjct: 151 VVAFMATLAMLVGARGLAEILAE-------------------RRTLVVQDRGFITFMNAN 191

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
            + +  ++     ++    + L RT        I  N++A       +    +  + +  
Sbjct: 192 ILGVNMLIWIFLIVAVLGWVLLNRTTFGRRTVAIGGNREAARLAGIDVRRHVMWLYVLVG 251

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGV 294
              G+AG  F       S    +  E  ++ ++V+     +GG  +++       I   +
Sbjct: 252 LASGIAGVMFLGRTTAGSSTNGQLLELDVIAAVVVGGTLLVGGRGTITGTVFGVLIFATL 311

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTT 322
             +    N       +       +    
Sbjct: 312 TNVFVQNNLSSSVQAVAKGVIIVVAVLL 339


>gi|289767603|ref|ZP_06526981.1| ABC transporter membrane protein [Streptomyces lividans TK24]
 gi|289697802|gb|EFD65231.1| ABC transporter membrane protein [Streptomyces lividans TK24]
          Length = 358

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/324 (12%), Positives = 98/324 (30%), Gaps = 13/324 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +  + L AV   +   +     +    + ++  Q     + A  +++++   G   
Sbjct: 36  LARPEVGVFLGAVAVFVFFLIAAPTLRDGGSMATVLYQSSTIGIMALPVALLM-IGGEFD 94

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A    A +  +L  +  +++W+ + V+ + S A G   G   +K       + TL
Sbjct: 95  LSAGVAVVTSALTAGMLSYQLTMNVWMGVVVALVASLAVGAFNGWVLVKTGLPSF-LVTL 153

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               + Q + +    +  G         +             F      V   +  + V 
Sbjct: 154 ATFLVLQGVNLAVTKLVTGNVATDDISDMDGFDQAKALFASSFDVGGVEVKITVVWWLVF 213

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +            RT   N    +  +Q++  ++   + F K++ F +        G 
Sbjct: 214 AALATWVLL------RTKYGNWIFAVGGSQESARAVGVPVTFTKITLFMLVGFGAWFVGM 267

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
               S + +        E I + + VI      GG  S         +   V +      
Sbjct: 268 HQLFSFNTVQSGEGVGQELIYIAAAVIGGCLLTGGYGSAIGPVFGAFMFGMVNQGIVFAG 327

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVI 326
           +                    + +
Sbjct: 328 WNPDWFKAFLGVMLLGAVLINLYV 351


>gi|261823627|ref|YP_003261733.1| inner-membrane translocator [Pectobacterium wasabiae WPP163]
 gi|261607640|gb|ACX90126.1| inner-membrane translocator [Pectobacterium wasabiae WPP163]
          Length = 393

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/357 (11%), Positives = 97/357 (27%), Gaps = 47/357 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             ++  +  +     ++  GA  S + + ++  Q  I  + A G+  V+ S   + L+  
Sbjct: 30  YVMIAAIIAIMLFFTYMTDGAYLSARNLSNLLRQTAITGILAVGMVFVIISA-EIDLSVG 88

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA------ 125
               +   +  I    +G  + L I V+  +    G   G      +     +       
Sbjct: 89  SMMGLLGGAAAIFDVWFGWPLPLTIVVTLALGLLLGAWNGWWVAYRKVPSFIVTLAGMLA 148

Query: 126 -----------------------------------TLIMSEIFQNILIKWKPITNGKAGI 150
                                                    +   I  +W+  ++     
Sbjct: 149 FRGILIGITNGTTVSPTSESMSQIGQSYLPSGIGFMFGAIGLMVFIGWQWRRRSSRARLG 208

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
              +                      +     +   +L +  L    I    RTA     
Sbjct: 209 LPINPPAGDIGRQTVTALVVLGAIYLLNDYRGVPTPVLVLTLLMLGGIFLATRTAFGRRI 268

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N  A       +   K++ FA++   + +AG   ++     SP     +E   + 
Sbjct: 269 YAVGGNIDAARLSGVNVERTKMAVFAINGLMVAVAGLILSSRLGAGSPSAGNIAELDAIA 328

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 329 ACVIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYVVKGGILLLAVWM 385


>gi|262203475|ref|YP_003274683.1| inner-membrane translocator [Gordonia bronchialis DSM 43247]
 gi|262086822|gb|ACY22790.1| inner-membrane translocator [Gordonia bronchialis DSM 43247]
          Length = 352

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 101/301 (33%), Gaps = 13/301 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +    + A+   +   +     ++ + + ++        + A G+++++   G   
Sbjct: 30  LVRPEVGALVGAIAIFVFFCIVAPTFRTPEALATILYASSTIGIMACGVAVLM-IGGEFD 88

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A    + +  +L     L++WL   ++  ++   G   G   +K +     I   
Sbjct: 89  LSTGVAVTFSSLAASMLAYNLHLNVWLGAALALCLALVVGFFNGYLVMKTKIPSFLITLS 148

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               +    L   K +T   A   ++D   F             F SSF ++ + +   +
Sbjct: 149 TFLMLTGVNLAVTKMVTGQVATPSISDMQGFASAQ-------KVFASSFDLFGVSVRITV 201

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +     +      L RT + N    +  NQ +  ++   +   K+  F          G 
Sbjct: 202 VWWIVFTLVATWVLMRTRVGNWIFAVGGNQDSARAVGVPVTAVKIGMFMFVGFCAWFVGM 261

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
               + D +       +E   +I+ V+      GG  +    A    I   V +      
Sbjct: 262 HLLFAFDTVQSGQGVGNEFFYIIAAVVGGCLLTGGFGTAVGAAIGAFIYGMVNQGIVYAG 321

Query: 303 F 303
           +
Sbjct: 322 W 322


>gi|195940592|ref|ZP_03085974.1| inner-membrane translocator [Escherichia coli O157:H7 str. EC4024]
          Length = 334

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/320 (12%), Positives = 90/320 (28%), Gaps = 23/320 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L   + +L  + V+  + +   + +  +   +  M     I ++ A G  +V+     + 
Sbjct: 6   LKHREALLGAVIVLMVVAIGSRVPSFIAPGNLVEMFNDTAILIVLALGQMMVL-LTKGID 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+      ++   Y       + + A   G     +    +   G    + TL
Sbjct: 65  LSMAANLALTGMIVALINFHYPDVPVWALLILASALGLLMGAINGLLVWKLGIPAIVVTL 124

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I++ ++                  L   G  V S      F        + +  + 
Sbjct: 125 GTMSIYRGMIF-----------------LLSGGGWVNSNQMGADFLGLPRASVLGLPVLS 167

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                    +  +LR +    A  T   N  A +         +  +F +S    G  G 
Sbjct: 168 WCAIAALLLVGYFLRYSRTGRALYTAGGNATAAYYTGINAGKMQFISFCLSGLLAGFCGY 227

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
            + +       D+    E  +V + VI     +GG   +         L  +      + 
Sbjct: 228 LWISRFAVAYVDVANGFELQVVAACVIGGISTMGGTGRVLGCLFGALFLGVINNALPVIG 287

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F  +        +    
Sbjct: 288 VSPFWQMAISGTVIVIAVLL 307


>gi|126730464|ref|ZP_01746275.1| ABC branched amino acid transporter family, inner membrane subunit
           [Sagittula stellata E-37]
 gi|126709197|gb|EBA08252.1| ABC branched amino acid transporter family, inner membrane subunit
           [Sagittula stellata E-37]
          Length = 317

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 99/301 (32%), Gaps = 16/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y + A G  ++  S  + +    I     A +  +    +G+  W+ + ++  +
Sbjct: 28  LVSGVLYALIALGFVLIFRSSRIFNFAQGIMVVFAALTL-VGLHAFGVPAWIAVALTLGV 86

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                + +    L+       I   + +      LI +  I  G     +         +
Sbjct: 87  MFVLAVTIERVVLRPLVGQPDIILFMATIGITLFLIGFGEIIFGGENKVMI----TEELS 142

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           + +           +I +     V+   C L A ++ +L  T +  A R + D+ +A  S
Sbjct: 143 IPTGDTVLEPWGGLLILQHLDITVVAVACALVAGLLAFLNYTRMGRAIRALGDDHQAALS 202

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +  ++    +  + ++     + G  + A                  + +++LGG+ S++
Sbjct: 203 VGISLQTVWVLVWFIAGIIALVTGIAWGAR---AGVSFALEVIAYKALPVLMLGGLESIT 259

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  ++  + +L                       T    +   +V+L R   L   
Sbjct: 260 GAIIGGLMIGLLEKLFEIY--------WGQPLLGGNTETWFAFVLALIVLLFRPQGLFGE 311

Query: 343 R 343
           R
Sbjct: 312 R 312


>gi|302562133|ref|ZP_07314475.1| sugar ABC-type transport system, permease component [Streptomyces
           griseoflavus Tu4000]
 gi|302479751|gb|EFL42844.1| sugar ABC-type transport system, permease component [Streptomyces
           griseoflavus Tu4000]
          Length = 359

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 94/320 (29%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +  + L AV   +         +    + ++  Q  +  + A  +++++   G   
Sbjct: 37  LARPEVGVFLGAVAVVVFFLFAAPPVRDAGSMANILYQSSVIGIMALPVALLM-IGGEFD 95

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A    A +  +L  +  +++W+ + V+  +S   G   G   L   G    + TL
Sbjct: 96  LSAGVAVVTSALTASMLSYQLTMNVWMGVIVALAVSLGIGAFNGW-MLVRTGLPSFLVTL 154

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I Q + +    +  G         +             F      V   +  + V 
Sbjct: 155 GTFLILQGVNLAVTKLVTGNVATDDISDMDGFEQAKSLFASSFEVGGVQVKITVVWWLVF 214

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +            RT   N    +  N+ +  ++   + F K+S F +        G 
Sbjct: 215 AALATWVLL------RTKYGNWIFAVGGNKDSARAVGVPVTFTKISLFMLVGFGAWFVGM 268

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
               S + +        E I + + VI      GG  S         +   V +      
Sbjct: 269 HNLFSFNTVQSGEGVGQELIYIAAAVIGGCLLTGGYGSAIGPVFGAFMFGMVQQGIVYAG 328

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
           +                   
Sbjct: 329 WNPDWFKAFLGVMLLGAVLI 348


>gi|255291866|dbj|BAH90361.1| branched-chain amino acid ABC transporter, permease protein
           [uncultured bacterium]
 gi|255291993|dbj|BAH90477.1| branched-chain amino acid ABC transporter, permease protein
           [uncultured bacterium]
          Length = 288

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 88/307 (28%), Gaps = 26/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       +I  M A GLS+++G + +++L       +G         + G+       +
Sbjct: 8   LVDGVAYGMILFMIAVGLSVIMGLMRVINLAHGGFALMGGVLAHWFTVQLGMPFVAGAGL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + + A    M             +  ++ +     ++I       G            
Sbjct: 68  AVLATMALAYPMETLVYSRIYKMSDLQQVLATIGIVFLMIASANFLFGS----------T 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L                F +  +    V++    + A + L + RT      R   D+++
Sbjct: 118 LLPIRLPDWMQGSVDLGFRVLPVHRIVVIIAGLIVIAGLYLLIDRTRFGIRLRAAVDHRE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L           F + +    + G   A          +     ++ + +V +GG 
Sbjct: 178 TAATLGIDTDRVFALTFMLGAGLAALGGVLGAELLPI--DAYYPLRYMVLFLIVVSVGGY 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++    A   L  +      +                        +A+  V+  R   
Sbjct: 236 GSITGSFVAAIGLGILDTAARYL--------------VPDIAGIAFFLAVMAVLAFRPDG 281

Query: 339 LLRLRTP 345
           LL  +  
Sbjct: 282 LLIKKRA 288


>gi|238064076|ref|ZP_04608785.1| sugar transport integral membrane protein [Micromonospora sp. ATCC
           39149]
 gi|237885887|gb|EEP74715.1| sugar transport integral membrane protein [Micromonospora sp. ATCC
           39149]
          Length = 341

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 99/312 (31%), Gaps = 21/312 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L+ V+  ++         S   +  +  Q+ +    A G ++++ + G + L+      
Sbjct: 37  FLVLVISFVVFATLNPRFASPNSLSLVLQQVAVIGALAVGQTLIILTAG-IDLSVGAITI 95

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +    GL   L I ++ ++  A G + G    + +                 
Sbjct: 96  LAMMLGAKIAVGQGLPGLLAIGLAVVVGAAAGALNGGLVTRLKLPPF------------- 142

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I+           G+  ++     GT + +++ +         + I +  +++ + +L+ 
Sbjct: 143 IVTLGTLSVFTAVGLLYSEGRSVQGTDLPAVLSWTGETFPVGRFRITVGVIMVLLLYLAV 202

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              L   +TA       + D+++A       +    LS + V+ A  G+           
Sbjct: 203 GFALA--KTAWGRHVYAVGDDKEAARLAGIRVDRVLLSVYLVAGAIYGLTAWILIGRAGA 260

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            SP+    +    + ++VI      GG  ++        I+                 +L
Sbjct: 261 ASPNAITDANLESITAVVIGGTSLFGGRGAVLGTLLGALIVGFFRSGLSLAGVDDQYRVL 320

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 321 AVGVLVILAVAV 332


>gi|218702024|ref|YP_002409653.1| putative sugar ABC transporter membrane protein [Escherichia coli
           IAI39]
 gi|300937376|ref|ZP_07152211.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 21-1]
 gi|218372010|emb|CAR19866.1| putative sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli IAI39]
 gi|300457550|gb|EFK21043.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 21-1]
 gi|323979030|gb|EGB74108.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli TW10509]
          Length = 329

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/321 (12%), Positives = 95/321 (29%), Gaps = 27/321 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           ++ +    +    VV  +L      +  +   I ++ +Q+ I  + A+G++ V+  LG +
Sbjct: 22  KVFRQYGGILSGMVVLIILFSFINDSFFTANNITNIILQVSIIAITAYGMTYVL-LLGDI 80

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+      +  S     I L+            +                  
Sbjct: 81  DLSVGSTIALIGTFAALGASWGIPFILLVPLSIIAALALGMI------------------ 122

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
              +     I      I             Y +   +  +I+   F +      +++   
Sbjct: 123 ---NGGLTAIAGIPSFIVTVATMGIFRGIAYIVTDGMPIMIKDDAFLALGNGEFLYIPIP 179

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  L       L +T           N++A       +   K+  F +++   G++G
Sbjct: 180 IWILIILLLINHFILTKTTFGRKIYITGGNKEAAVYSGINVTRLKIKVFMITAVLAGISG 239

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGM 301
              A+      P+     E   + + V+      GG  ++         +  +      M
Sbjct: 240 MILASRLYSGQPNSALSYELDAIAAAVLGGTSLNGGYGTVVGTVIGALTIGVINNGMNLM 299

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
           N  YF  ++       +    
Sbjct: 300 NVPYFYQMVVKGLVILVAVYF 320


>gi|167760143|ref|ZP_02432270.1| hypothetical protein CLOSCI_02515 [Clostridium scindens ATCC 35704]
 gi|167662268|gb|EDS06398.1| hypothetical protein CLOSCI_02515 [Clostridium scindens ATCC 35704]
          Length = 315

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/298 (14%), Positives = 89/298 (29%), Gaps = 28/298 (9%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      +   + S+  Q+ ++ + + G++ V+  LG + L+                  
Sbjct: 27  IANPRFVNPNNLFSLLRQVSMFGIASIGMTFVI-LLGDIDLSIGSIITFVNIICAYFMVH 85

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
            G+++WL I ++ ++S   G + G          L                         
Sbjct: 86  MGMNMWLAILITLVVSTLIGTLNGFMVSTVGIPALIATF--------------------A 125

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                    Y +   +        F      Y   +   ++ M    A     L +T   
Sbjct: 126 TQTAFQGLAYLVSGGLPVNGFTESFKIFGQGYIGIVPVPVIIMVICFALGSFILNKTYFG 185

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
             +  +  N +A       +   K   F++S  F G+AG    +  +             
Sbjct: 186 RYFYAVGGNVEAARLSGIRVGRIKYLVFSISGFFAGLAGIVMLSRTNS-GMPNAGLGYEF 244

Query: 268 IVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            VI+ V+LGG+        +S +   T I+  +      MN   F   +       + 
Sbjct: 245 DVITCVVLGGVSVAGGYGKISGVVAGTFIIGALQNGMVLMNINSFIQDIVMGVVLALA 302


>gi|192290342|ref|YP_001990947.1| amino acid ABC transporter permease [Rhodopseudomonas palustris
           TIE-1]
 gi|192284091|gb|ACF00472.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 292

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 85/290 (29%), Gaps = 22/290 (7%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+++ G + + +        +  Y    L + + +   L  P+        G ++ 
Sbjct: 23  VAVGLALIFGLMDVTNFAHGEFLMLAMYITFFLFAFFAIDPILAAPLVGAAMFVFGAVIY 82

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           L  ++F       A    + I    +     +     G+          +   S +    
Sbjct: 83  LLVVRF-------AMRARANIGMVQIFTTFGLAILMRGLAQYFFTPDYRSINVSWLGGKT 135

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                V   +      L       ++  ++++T    A    R++  A   +        
Sbjct: 136 LEIGGVFLPVPQLVGALVSIAAFGALYFFMKKTDFGRALEATREDAGAVALVGIDKNKVF 195

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              + + SA IG+AGA  A             S  +I    V LGG  S+        I+
Sbjct: 196 ALGWGLGSALIGLAGAVMAIFFYI--YPDVGASFALIAYVTVALGGFGSVFGAFAGGIIV 253

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             V      +      S+              +     LV+ +R   L  
Sbjct: 254 GLVEATTAMILPPSLKSIG-------------IYAVYLLVVFIRPRGLFG 290


>gi|319792945|ref|YP_004154585.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315595408|gb|ADU36474.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 321

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 91/308 (29%), Gaps = 23/308 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L  +   +          + + +  +  Q+++  + A G ++++ + G + L+C +  A+
Sbjct: 20  LALLGACIFFATQSDRFLTGENLSLILQQVMVVGVIAIGQTLIILTAG-IDLSCGMVMAL 78

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           G        +  G+ + + I     ++   G+I GL   + +     +    ++  F   
Sbjct: 79  GGIIMTKFATELGMPVPIAILCGIGVTTLFGLINGLLVTRIKLPPFIVTLGTLNIAFAIT 138

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
            +                      T            ++F I    + +  + M  L   
Sbjct: 139 QLY-----------------SSSQTITDLPAGLTGLGTTFAIGSAEVAWGSVLMVALYGL 181

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               LR T        + +N +A   +        L  +  +    G+A     A     
Sbjct: 182 AWFVLRETGAGRHIYAVGNNAEATRLVGIPTQRVLLGVYVAAGVLYGIASLLSVARTGVG 241

Query: 257 SPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            P+  +      + ++V     + GG   +        I+         M       +L 
Sbjct: 242 DPNAGQTENLDAITAVVLGGTSLFGGRGIVLGSLIGVLIVGVFRNGLTLMGVSSIYQVLV 301

Query: 312 FDCSFNMR 319
                 + 
Sbjct: 302 TGVLVILA 309


>gi|315605554|ref|ZP_07880590.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315312699|gb|EFU60780.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 356

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/314 (12%), Positives = 100/314 (31%), Gaps = 17/314 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL-LSLN 69
            + I+  + VV  L++     A  +   + S+    ++  ++A G+ +V+ S G+ +S  
Sbjct: 19  REGIVLTVLVVLALVMSAISPAFFTVSTLFSLLRSSIVPTIYALGVLLVIISGGIDVSFA 78

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
            + ++A  A     L     + ++    ++ +I    G++ G    +F+   L +     
Sbjct: 79  AIASFASYATIVFQLSRGINIGLFGSFAMALIIGAVLGLLNGYLISRFKLPTLIVT---- 134

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                  L               +  +  L   + S                 ++ +++ 
Sbjct: 135 -------LGTQGIFQGFLLAYIGSTYIAQLPEGMASASTANIVSVDTDTGVALLHSMIIP 187

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              L+  I + L +T    +   I  + ++       +   ++  + ++      AG  +
Sbjct: 188 AIVLAIVIAVILSKTMFGRSIYAIGGDTESAHRAGINVKRTQICVYVIAGTLAATAGMVY 247

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
                  +P      E  I+ ++V     I GG  S+        ++  +      +   
Sbjct: 248 MILGRSANPQELVGHELDIIAAVVLGGASIFGGRGSVRGTILGVLLVQLINNSLILIGVP 307

Query: 305 YFNSLLKFDCSFNM 318
                         
Sbjct: 308 SAWQRAAVGLLLVA 321


>gi|301060551|ref|ZP_07201390.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
 gi|300445335|gb|EFK09261.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
          Length = 287

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 103/307 (33%), Gaps = 28/307 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I     ++ A G S++ G   + +      Y    +    L ++ GL+  L I +
Sbjct: 4   LIYGLINAASLILLAVGFSLIYGVSRVANFAHGAVYIATGFIAWALMNKAGLNYPLSIVL 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++S   G+ +    L       A   +    I   ++   K +              F
Sbjct: 64  SVVVSALLGVGIYQGLLIRVRGMPASEIIASFAIAMGMIEALKVV-------------GF 110

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G+    +          +  +      +L        + +++RRT I  + R I  +++
Sbjct: 111 VGSYGNPVFVRGSVEVLGIPVDYQRLISVLVAFGTVVFLYVFIRRTKIGLSLRGIAQDER 170

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           +   L      A   + A+ SA  G+A        +        +   I  +++ I+GG+
Sbjct: 171 SSMMLGINSDLAATISLAIGSALAGIAAVVLLPLGNM--YPGIGYEALIYAVAVCIVGGL 228

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL     A  ++     +        +                ++ +A+ ++++ +   
Sbjct: 229 GSLGGTVFAGLMIAFAQVITVRFLGGQW-------------RMLVIFLAILVILVFKPSG 275

Query: 339 LLRLRTP 345
           LL  +  
Sbjct: 276 LLGRQKE 282


>gi|170735070|ref|YP_001774184.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
 gi|169821108|gb|ACA95689.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
          Length = 286

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 50/304 (16%), Positives = 103/304 (33%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++Y + A GLSIV G L  ++      Y +GAY       ++  + W+ + V
Sbjct: 8   IVNGIGVGMLYFLLAVGLSIVFGLLRFVNFAHGAFYLLGAYLCY-QALQWSANFWVALAV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ GA   I+    L+          ++ +     +L +   +  G  G  V      
Sbjct: 67  VPLVVGAFAWIVEKLVLRHVYAQQHEFHILATVGLALVLQECAILAWGPLGDNVPPPDAL 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  +              +Y  +  +V+     L+A +   L  T + +  R   ++ +
Sbjct: 127 NGVVI----------WGGFVYPKYRLFVIGFTAVLAALLWWVLEGTRLGSTVRAGSESTE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       FA+ +    +AG   A  R        +      V+ +V    M
Sbjct: 177 MVSLLGINVTRVFSLVFALGATTAALAGVLAAPIRGVDPFMGIEALGVAFVVVVVGG--M 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +         ++  V  L   +              +      ++ +A+  V+L+R + 
Sbjct: 235 GNFLGALVGGLLVGIVQSLMSTL--------------WPEGARLMIYVAMAAVLLLRPNG 280

Query: 339 LLRL 342
           LL  
Sbjct: 281 LLGR 284


>gi|157371456|ref|YP_001479445.1| monosaccharide-transporting ATPase [Serratia proteamaculans 568]
 gi|157323220|gb|ABV42317.1| Monosaccharide-transporting ATPase [Serratia proteamaculans 568]
          Length = 331

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/321 (12%), Positives = 92/321 (28%), Gaps = 20/321 (6%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y   + L  V    L  L          I ++   I I  + A G+SI +   G   L+ 
Sbjct: 22  YKWGMLLTVVALIALFGLASDNFLDPNNIINILRSIAIVTVIAIGVSISLSVGG-FDLSV 80

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               ++              ++ + + V         +++ L      G + A   +++ 
Sbjct: 81  GSTASLA------------NALVVSLFVWYGFGTTGAIVLTLLICTLVGLFNAFLIVVLK 128

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                  +    +  G A  Y           + +                 +  ++L M
Sbjct: 129 IPDMLATLASLFVIQGVAMTYSYGGSITQNMLLPNGDMAEGLIPEIFSSLGQVPVIVLIM 188

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++  + L+L  T        I  N +A        +  +++A+ +S+    + G   A
Sbjct: 189 LAVTVVVQLFLSLTKHGRRMYAIGGNPEAARLSGIRTVRYRVAAYVISALLASLGGILLA 248

Query: 251 ASRDRISPDMFKFSENIIVISIVILG------GMTSLSKIAKATAILIGVVELCCGMNFY 304
           +     S         +  ++   +G      G  +         IL  +      ++  
Sbjct: 249 SRIGS-SQVNAGGGYLMDAVAAAYIGFSLAGSGKPNALGTLVGAVILGVLQNGLVMLSVP 307

Query: 305 YFNSLLKFDCSFNMRHTTLMV 325
           Y+   +       +      +
Sbjct: 308 YYAMDIIKGLVLALALAITYI 328


>gi|46204702|ref|ZP_00209521.1| COG4177: ABC-type branched-chain amino acid transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 273

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 58/167 (34%), Gaps = 1/167 (0%)

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
              V+    +Y++ L +  +   ++LW+ R+   +     R+N+     +       KL 
Sbjct: 79  FVGVLNTRNLYWLALAVLVVVYLVVLWVERSRAGHVAAATRENEMRVRVIGGRPYLVKLL 138

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            F +++    + G  +   +    P        + ++ +V+LGG+ S         +   
Sbjct: 139 VFVLAATLATVVGMAYLLLQSGAVPRATSADFTLTLLVMVVLGGVGSRWGAIVGGVLYTI 198

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRH-TTLMVIALFLVILMRSHSL 339
           + +    +      + L       +     L+     LV++     +
Sbjct: 199 LDQRLGTLASSAAVADLPAVLRVPLSEPLFLLGTLFILVVMFLPGGI 245


>gi|329936448|ref|ZP_08286213.1| ABC transporter permease [Streptomyces griseoaurantiacus M045]
 gi|329304244|gb|EGG48125.1| ABC transporter permease [Streptomyces griseoaurantiacus M045]
          Length = 346

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/320 (12%), Positives = 96/320 (30%), Gaps = 27/320 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L ++D  +  L +V  LL F F+    +   +  +    L   + A  ++++V   G + 
Sbjct: 14  LGRWDSAVGALLLVLLLLSFGFVDGFGNALNLSFLIGNTLPIALIALPMTLLV-VSGEID 72

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+      +       L ++      ++     + +    +   L +             
Sbjct: 73  LSVASTAGLSGSVMGALWNQGMSIETIIPLCLLLGAVCGLVNGLLVT------------- 119

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                 +  L          A      ++      V      +   ++  + + F+    
Sbjct: 120 ------RLGLPSLAVTIGTLAAYRGIAQIVLGSDAVTDFPTRYLDFAAGRLGDTFLPQAF 173

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    L A  ++ L  T    +   I   ++A       +   KL  F  +     + G 
Sbjct: 174 LPFLVLLAIAVVVLHATPFGRSLFAIGAGEEAARFAGIRVKRHKLILFVATGFMASLTGI 233

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGM 301
           F+A        D       + V++ V+LGG+       +L        +L  +      +
Sbjct: 234 FWALHYASARYDNAT-GLELSVVAAVLLGGIDFDGGKGTLGGAIAGVFLLGALQNAMSLL 292

Query: 302 NFYYFNSLLKFDCSFNMRHT 321
           N    + ++       +   
Sbjct: 293 NVSAQSQIVVTGVLLVVSVL 312


>gi|315502861|ref|YP_004081748.1| inner-membrane translocator [Micromonospora sp. L5]
 gi|315409480|gb|ADU07597.1| inner-membrane translocator [Micromonospora sp. L5]
          Length = 326

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 84/319 (26%), Gaps = 26/319 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +    Y   +    V     +        +   + ++ IQ     + A GL  V+   G 
Sbjct: 19  INWRDYVVYIGFAVVFLFFAITQGGNGFLTTSNLTNIVIQTAPITIMAVGLVFVLA-AGE 77

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+ A    +        +  +    A  +    +     +L     +L   
Sbjct: 78  IDLSIGSVVALSALVGAVTMRETDSMLLGVAAGLAAGAAVGLVNGVFVTLVRLPSFL--- 134

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                            +T    G          G     +              + +  
Sbjct: 135 -----------------VTLATMGAVAGLAREVTGLQSVPVSNDAFLSFFGQGEILGIPG 177

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++L     +    L LR+T        I DN  A       +I  K+     S+    +A
Sbjct: 178 LVLWSVAAAVVGYLVLRQTRYGAHTLAIGDNVAAARVSGIKVIRVKIMVLMGSAMCAALA 237

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G  +A         + +     ++ ++++      GG  S+      + ++  +      
Sbjct: 238 GLLYAGRLQGARYTLGEADLMSVIAAVIVGGTSLFGGKGSIVGAVLGSLLMGMLNNGLIL 297

Query: 301 MNFYYFNSLLKFDCSFNMR 319
                   ++       + 
Sbjct: 298 AGLSVSQQMMARGAIILVA 316


>gi|110643495|ref|YP_671225.1| putative sugar uptake ABC transporter permease protein [Escherichia
           coli 536]
 gi|191173855|ref|ZP_03035376.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Escherichia coli F11]
 gi|260870002|ref|YP_003236404.1| putative carbohydrate ABC transport system permease [Escherichia
           coli O111:H- str. 11128]
 gi|110345087|gb|ABG71324.1| putative sugar uptake ABC transporter permease protein [Escherichia
           coli 536]
 gi|190905905|gb|EDV65523.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Escherichia coli F11]
 gi|222034967|emb|CAP77710.1| ribose transport system permease protein rbsC [Escherichia coli
           LF82]
 gi|257766358|dbj|BAI37853.1| putative carbohydrate ABC transport system permease [Escherichia
           coli O111:H- str. 11128]
 gi|312947808|gb|ADR28635.1| putative carbohydrate ABC transport system permease [Escherichia
           coli O83:H1 str. NRG 857C]
 gi|323178571|gb|EFZ64147.1| ribose transport system permease protein rbsC [Escherichia coli
           1180]
 gi|324009079|gb|EGB78298.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 57-2]
 gi|324015858|gb|EGB85077.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 60-1]
          Length = 329

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/321 (12%), Positives = 95/321 (29%), Gaps = 27/321 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           ++ +    +    VV  +L      +  +   I ++ +Q+ I  + A+G++ V+  LG +
Sbjct: 22  KVFRQYGGILSGMVVLIILFSFINDSFFTANNITNIILQVSIIAITAYGMTYVL-LLGDI 80

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+      +  S     I L+            +                  
Sbjct: 81  DLSVGSTIALIGTFAALGASWGIPFILLVPLSIIAALALGMI------------------ 122

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
              +     I      I             Y +   +  +I+   F +      +++   
Sbjct: 123 ---NGGLTAIAGIPSFIVTVATMGIFRGIAYIVTDGMPIMIKDDAFLALGNGEFLYIPIP 179

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  L       L +T           N++A       +   K+  F +++   G++G
Sbjct: 180 IWILIILLLINHFILTKTTFGRKIYITGGNKEAAIYSGINVTRLKIKVFMITAVLAGISG 239

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGM 301
              A+      P+     E   + + V+      GG  ++         +  +      M
Sbjct: 240 MILASRLYSGQPNSALSYELDAIAAAVLGGTSLNGGYGTVVGTVIGALTIGVINNGMNLM 299

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
           N  YF  ++       +    
Sbjct: 300 NVPYFYQMVVKGLVILVAVYF 320


>gi|313806873|gb|EFS45371.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL087PA2]
          Length = 333

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +   I ++GIQ  +  + A+G++ V+ + G + L+     
Sbjct: 35  ALVGLIILCIALFIATPVFLTVPNIINIGIQAAVVAIMAFGMTFVIVTSG-IDLSVGSVA 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A     + S  GL  WL + +  +I    G + GL     +                
Sbjct: 94  ALSAMVSAWMFSNAGLPGWLTLIIGLLIGLLAGAVSGLAIAYGKLPAFI----------- 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  + +      +        +   ++ +    
Sbjct: 143 -----------ATLAMMSVARGLTLVISGGTPVATSDAVNQLGADVGPIPVPVIMLALAG 191

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N++A       +    ++ +A++  F G+AG   A    
Sbjct: 192 VVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALAGVFAGLAGLVLAGRLS 251

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLS-----KIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI G   S              +L  +      +N   F   
Sbjct: 252 SAQPQAGFGYELDAIAAVVIGGASLSGGSGKASGTFIGAVLLAVIRNGLNILNVTSFWQQ 311

Query: 310 LKFDCSFNMR 319
           +   C   + 
Sbjct: 312 VVIGCVIALA 321


>gi|238786904|ref|ZP_04630705.1| Sugar ABC transporter, permease protein [Yersinia frederiksenii
           ATCC 33641]
 gi|238725272|gb|EEQ16911.1| Sugar ABC transporter, permease protein [Yersinia frederiksenii
           ATCC 33641]
          Length = 340

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 92/299 (30%), Gaps = 9/299 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   +      + +    +   +  M   I I    A G++ V+ + G + L+      
Sbjct: 4   FIALFLILGFFSVMVPGFLATGSLIIMVKHIAINAFLALGITFVIITAG-IDLSIGATLG 62

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       + ++  +     I +   +     +++ + +L    +   I    ++     
Sbjct: 63  LCGMIAGWMITQGIVLPMFGIAIFPSVWVVVPVVLVIGALIGAVNGWIITRYNVAPFICT 122

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +   +       A + ++    F G      +    F        + +   +  M  L+ 
Sbjct: 123 LGTMYVVR---GAAMLISGGETFPGLQGNPQLGNTGFDLLGSGTLLGLPIAIWIMFILAL 179

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I    RR         I DN++A       +   K+  + +S     +AG   +A    
Sbjct: 180 VIAYVARRLPFGRHVYAIGDNERAAELSGVKVRQVKVWVYTISGFCAAIAGIIVSAQLVA 239

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             P      E   + ++V+      GG  ++        ++  + +    M    F  +
Sbjct: 240 SHPANGSGFEMNAIAAVVLGGTSLAGGRGTILGTLIGAFVIGILADGLVMMGVSEFWQM 298


>gi|238797901|ref|ZP_04641392.1| Monosaccharide-transporting ATPase [Yersinia mollaretii ATCC 43969]
 gi|238718206|gb|EEQ10031.1| Monosaccharide-transporting ATPase [Yersinia mollaretii ATCC 43969]
          Length = 309

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 89/303 (29%), Gaps = 18/303 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++  + L +      +   +  +     I  + A GL  VV   G + ++     AI  
Sbjct: 1   MLLLAIGLSVRSAEFLTLGNLTDVATSYAILGILACGL-FVVLIAGGIDISFPAVTAIAQ 59

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y        +G S  L   ++  +    G+I GL     +      A +I          
Sbjct: 60  YVMASWVITHGGSFALAFILAMAVGLVLGLINGLLVYWLKVP----AIIITIATLNLFYG 115

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +TNG       D                   +    Y+  +   L  +        
Sbjct: 116 LLVYVTNGTWLYGFPDWFMTGINWFS--------FTGSDGYDYGLTLPLFCLAATIIVTG 167

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           + +  T +      +  N+ A   L   I+   L  +       G+A    A     ++P
Sbjct: 168 VLMNYTRLGRQIFAMGSNKDAASRLGINILRLHLYVYGYMGMLAGVAAVVQAQISQSVAP 227

Query: 259 DMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           +     E  ++ ++V     + GG  +L+       +L  +      ++   +   +   
Sbjct: 228 NSLMGFELTVLAAVVLGGTSMSGGRGTLTGTVLGVMLLAFLQNGLTLLSVSSYWHTVFSG 287

Query: 314 CSF 316
              
Sbjct: 288 VII 290


>gi|213619178|ref|ZP_03373004.1| branched-chain amino acid transporter permease subunit LivH
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-2068]
          Length = 202

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 52/180 (28%), Gaps = 14/180 (7%)

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                      +           + +       ++ +++R + +  A R   ++ K    
Sbjct: 31  FNGQWIVGSSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRACRACAEDLKMASL 90

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L           F + +A   +AG         I+P    F   +   +  +LGG+ S+ 
Sbjct: 91  LGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPY-IGFMAGMKAFTAAVLGGIGSIP 149

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  IL     L        +  ++ F               L LV+L+    +L  
Sbjct: 150 GAMIGGLILGVAEALSSAYLSTEYKDVVSF-------------ALLILVLLVMPTGILGR 196


>gi|160941583|ref|ZP_02088914.1| hypothetical protein CLOBOL_06483 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435477|gb|EDP13244.1| hypothetical protein CLOBOL_06483 [Clostridium bolteae ATCC
           BAA-613]
          Length = 319

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/338 (12%), Positives = 90/338 (26%), Gaps = 41/338 (12%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            IF    N       +  ++  +   +     ++   I ++  Q  + ++ + GL+ V+ 
Sbjct: 5   KIFEEIRNSKVFYSLIGLIILVIFSAIAAPNFRTVDNIITVFRQASVLLVLSAGLTAVL- 63

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G + L+                          I    +      +   L  +      
Sbjct: 64  LTGGMDLSVGATAGFIGCICAQCIKNGVPIPAAFILGILIGLVVGVINGLLAGILPSFIA 123

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                 +MS +   ++                                  F    V Y  
Sbjct: 124 TYGTNWVMSGLAVLVMQGAVI-----------------------YDLPKGFTQIGVGYTG 160

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +  +++    +   I + L++T           N  A       +    LSAF + S  
Sbjct: 161 PVPNLIIIAAVVVILIYVLLQKTTYGRQVYAYGSNPVAAKYAAVPVKKVMLSAFMMCSMC 220

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+AG    A  +     M        V ++V+     LGG   +        IL  +V 
Sbjct: 221 AGLAGMLMTARLNAADAAMGDSYGLQTVAAVVVGGTSMLGGEGGVLGTVVGALILTIIVN 280

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +                   +     ++ I +  ++L 
Sbjct: 281 VM------------NLKGISSYAQGLVIGIVIIAMVLF 306


>gi|159036361|ref|YP_001535614.1| inner-membrane translocator [Salinispora arenicola CNS-205]
 gi|157915196|gb|ABV96623.1| inner-membrane translocator [Salinispora arenicola CNS-205]
          Length = 304

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 99/308 (32%), Gaps = 17/308 (5%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L            Y+ ++    L+  + A    ++VG  GL  L       +GAY+   +
Sbjct: 9   LAAAVALPWLVNGYVIALAATALVMAVLAMSAQLLVGWAGLSPLGQAAYLLVGAYTAASV 68

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            +   L    L+  +A  + A  +   L        +L +                +   
Sbjct: 69  ATVTSLGPVQLLAATAAGAIAAVLTGWLAVRARGITFLMVT---FGLGELVHAAANQWAP 125

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G  GI+ +  +                    ++   ++Y  +L    +  + +  L RT
Sbjct: 126 GGSEGIHTSPVVALP-------------GLPAMVRPGWVYLYVLACTLVVGAAVAVLVRT 172

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
             +   R I  ++    +         L+A+ ++    G +GA   A    +SP      
Sbjct: 173 RFALLLRGIAAHEPRVQAAGHHTGRLLLAAYTIAGGIAGASGALVIAVTRYVSPADAAMG 232

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
            + + ++  ++ G  S++       +L+   +   G+   +  +LL              
Sbjct: 233 VSALALAAALI-GSGSMTGACAGAFLLVAARDWASGLLGGHGPTLLGLCFLLLAYLPRRR 291

Query: 325 VIALFLVI 332
           +  L L +
Sbjct: 292 LAGLTLRL 299


>gi|146338476|ref|YP_001203524.1| sugar ABC transporter membrane protein [Bradyrhizobium sp. ORS278]
 gi|146191282|emb|CAL75287.1| ABC transporter, Membrane component (putative high-affinity
           D-ribose transport protein) [Bradyrhizobium sp. ORS278]
          Length = 343

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 98/319 (30%), Gaps = 22/319 (6%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +L +L ++      L  G   + + +  +  Q  +  + A G++ V+   G + L+
Sbjct: 30  RAAGMLPVLLILCIGFHMLSEGRFFTGQNLGIVLQQAAVNTVLAAGMTFVI-LTGGIDLS 88

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A  A +  +  S+      L +P + +   A G++ G      R         I+
Sbjct: 89  VGSILAAAAMA-GLTLSKMPELGALWLPAAVLTGLAFGVVNGALIALLRLPPF-----IV 142

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +      +     +  G   ++     Y                 + +   + + ++ + 
Sbjct: 143 TLGSLTAVRGLARLMGGDTTVFNPTIPYAFIGNAS---------LTIIPGVLSIPWLSVI 193

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              +     L LRRT +      +  N+ A       +    L  + +S    G+ G   
Sbjct: 194 ALLVILGSWLILRRTVLGVHIYAVGGNESAARLAGIKVWGVLLFVYGMSGLLAGLGGGMQ 253

Query: 250 AASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNF 303
           AA     +      S  +  I+ VIL      GG+ S+        I+  +      +  
Sbjct: 254 AARLYAANGLQLGQSYELDAITAVILGGTSFVGGIGSIWGTLVGALIIAVLSNGLILVGV 313

Query: 304 YYFNSLLKFDCSFNMRHTT 322
                 +            
Sbjct: 314 SDIWQYVIKGLVIIGAVAL 332


>gi|115351347|ref|YP_773186.1| inner-membrane translocator [Burkholderia ambifaria AMMD]
 gi|115281335|gb|ABI86852.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia ambifaria AMMD]
          Length = 313

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 97/312 (31%), Gaps = 21/312 (6%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +     L+  M + GL+++    G+L+      Y +GAY    + +  G    L++   A
Sbjct: 11  NGLSYGLLLFMLSAGLTLIFSVQGVLNFAHASFYMLGAYVGYSIAAGAGFWPALVLAPLA 70

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +     G    L                       +L+ +        G  +   L  L 
Sbjct: 71  VGLLGAGCERWLL----------RRVQARGGHTSELLLTFGLAYLIGEGAKLVWGLTPLP 120

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             V  L       +  +    +  +++     +  ++ + LR + I    R    ++ A 
Sbjct: 121 APVPLLFDGAPVTAFGLALPRYRLFMMAMSTAMLVALGVLLRASRIGLVVRAALTHRAAV 180

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +L   +       F   +A   +AG   A     +       +   +V ++V++GG+ S
Sbjct: 181 EALGYDVPRVMTGLFGAGTALAALAGVIGAPLA--VIEPALAETVGSVVFAVVVIGGLGS 238

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN---------MRHTTLMVIALFLV 331
           L     A+  +          +    +       +                +  + L  V
Sbjct: 239 LGGAFVASLAVGFAQTFAASSDTSLRDLAQWAGVALPDGVAAVSIAQLAPLVPYLLLVAV 298

Query: 332 ILMRSHSLLRLR 343
           ++ R H L   R
Sbjct: 299 LVARPHGLFGER 310


>gi|114762340|ref|ZP_01441798.1| Bacterial inner-membrane translocator:Sodium:dicarboxylate
           symporter [Pelagibaca bermudensis HTCC2601]
 gi|114544958|gb|EAU47962.1| Bacterial inner-membrane translocator:Sodium:dicarboxylate
           symporter [Roseovarius sp. HTCC2601]
          Length = 344

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/313 (10%), Positives = 88/313 (28%), Gaps = 10/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                V   ++  +      S      M   + I+ + A G+ ++V   G + L+     
Sbjct: 27  AFFALVAIIIVFSILSPVYFSVGNFLIMSSHVAIFGLLAIGM-LLVILNGGIDLSVGSTL 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       L     +    +I    + +     I     +      +    +    +  
Sbjct: 86  GLSGVVAGYLMQGVEIPAAGVILYPPVWAVVLLTICLGAFVG----AINGVLIAFFNVPA 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +             + + + L +      + +    F          +   ++ +  ++
Sbjct: 142 FVATLGMLYVARGVALLMTNGLTYNNLGGDAALGNTGFDWLGFNRIGGVPIGVIVLALVA 201

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++ L L RTA          N++A           K+S + +S     +AG   ++   
Sbjct: 202 LTVGLVLARTAFGRWLYASGGNERAAELSGVPTRKVKVSVYVLSGICAAIAGLVLSSQLT 261

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI      GG  ++        ++  + +    +    +   
Sbjct: 262 SAGPTAGTTYELTAIAAVVIGGAALTGGRGNVRGTMLGAFVIGFLSDGLVIIGVSAYWQT 321

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 322 VFTGAVIVLAVLL 334


>gi|111223237|ref|YP_714031.1| high-affinity branched-chain amino acid ABC transporter ATP-binding
           protein [Frankia alni ACN14a]
 gi|111150769|emb|CAJ62471.1| high-affinity branched-chain amino acid transport protein (ABC
           superfamily, atp_bind) (partial match) [Frankia alni
           ACN14a]
          Length = 1208

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 62/286 (21%), Positives = 112/286 (39%), Gaps = 9/286 (3%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I   + V    LL   +       +++++ IQ   Y +    L ++VG  G LSL    
Sbjct: 306 AINLPVLVGGFALLVALVWLVLPDPWVNAVAIQSG-YALILLSLVVLVGYAGQLSLAQSA 364

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
              I A     L +  G      + V  + + A G++  LP+L+ RG  LA+ TL +   
Sbjct: 365 LAGIAALVAGRLVAAEGWPFAAALVVGVLATTAVGVLFALPALRTRGLQLAVVTLGLGVT 424

Query: 133 FQNILIKWKPITNGKAGIYVA------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
              IL +    +    G   +      D+   +  T  + + F   P            +
Sbjct: 425 VSAILFQRGYSSPPADGQSSSIFGGVLDQQGTVVATADAPLHFLGIPVDRTDDPRAYATL 484

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            L +  L+   +  +RR         +R N++A  SL  ++  AK+ AF +S+A  G+ G
Sbjct: 485 ALILLLLAGLAVSAVRRGRAGRRLIAVRTNERAAASLGISVFAAKIYAFGLSAAIAGLGG 544

Query: 247 AFFAASRDRISPDMFKFSENIIVI--SIVILGGMTSLSKIAKATAI 290
              A +   IS D   F     ++  +  ++GG+  +S       +
Sbjct: 545 VLLAFADRNISYDDGDFLPFTGILVVAYAVVGGVGYISGAGIGALL 590



 Score = 37.5 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 42/130 (32%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y         +Y   A GL ++    G+L+L         AY +   G  +GL   L   
Sbjct: 7   YAVISLGTGALYAFVAAGLVLIHRGSGVLNLGQGALVMFAAYLFHEAGDGWGLPTALAAV 66

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           V  +++GA  ++     L+       +  ++ +     +L     +  G     V   L 
Sbjct: 67  VVVVLTGAVALLFHAAVLRPMRHAAPLNRVVATLGLLIVLQAAVVLAFGGQSRSVPSFLP 126

Query: 158 FLGTTVRSLI 167
                V    
Sbjct: 127 QSVVEVFGKP 136


>gi|51246341|ref|YP_066225.1| high-affinity branched-chain amino acid ABC-transporter, permease
           protein (BraD) [Desulfotalea psychrophila LSv54]
 gi|50877378|emb|CAG37218.1| probable high-affinity branched-chain amino acid ABC-transporter,
           permease protein (BraD) [Desulfotalea psychrophila
           LSv54]
          Length = 298

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 103/305 (33%), Gaps = 19/305 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      ++ M A G ++V G + L++       A  A+  + + +        ++  
Sbjct: 8   LVNGLTIGSMFAMIALGYTMVYGVMKLINFAHGDLVAASAFVGLFVFTELFGENGSILTA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+ +    ++     L  R  Y  + T        + L     I NG   ++       
Sbjct: 68  VAVFAVTAVIVAICGVLLERVAYRPLRTAPRLSAVVSALGASMVIQNGIMLLWGPQ---- 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  LI    +    V+  +    +++   FL  ++ L++ +T +  A R    +Q 
Sbjct: 124 -MKIFPDLIPQIYWELGGVVISLIQVIIMVLSLFLMIALYLFIEKTKMGTAIRASAIDQD 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    ++ F + S+   + G F       I+ DM  +   +      I+GG+
Sbjct: 183 AARLMGINVNNIIVTIFVIGSSLGAVGGLFIGMYYKGITFDM-GWQYGLNAFVAAIIGGI 241

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L        G     +     F               L +++++R   
Sbjct: 242 GNIPGAMLGGMLLGLFNAFIAGYVSSTWADAFTFT-------------LLIVILIVRPTG 288

Query: 339 LLRLR 343
           +L  R
Sbjct: 289 ILGER 293


>gi|322833283|ref|YP_004213310.1| inner-membrane translocator [Rahnella sp. Y9602]
 gi|321168484|gb|ADW74183.1| inner-membrane translocator [Rahnella sp. Y9602]
          Length = 399

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 102/355 (28%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  +AV+         GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 38  MLAAIAVIIVFFSVTTDGAYISARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 96

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             +   +  I     G  + L I V+  +    G   G      +     +    M    
Sbjct: 97  MGLLGGAAAIFDVWLGWPLPLTIVVTLALGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 156

Query: 134 QNIL--------------------------------IKWKPITNGKAGIYVADRLYFLGT 161
             ++                                     +  G        R      
Sbjct: 157 GILIGITSGTTVSPTTPAMSLIGQSYLPDSFGFGIGAIALALFIGWQWRRRKQRAVLGLP 216

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYV---------LLGMCFLSASIILWLRRTAISNAWRT 212
              +     R   + VI    +Y +         +L +  L    +    RTA       
Sbjct: 217 LTAAKSDVTRQALTAVIALGAIYLLNDYRGVPTPVLILVALMLGGMFMASRTAFGRRIYA 276

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +  +KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 277 IGGNIEAARLSGVNVERSKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 336

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 337 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGGILLLAVWM 391


>gi|229830055|ref|ZP_04456124.1| hypothetical protein GCWU000342_02161 [Shuttleworthia satelles DSM
           14600]
 gi|229791353|gb|EEP27467.1| hypothetical protein GCWU000342_02161 [Shuttleworthia satelles DSM
           14600]
          Length = 329

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/283 (10%), Positives = 80/283 (28%), Gaps = 24/283 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               S + I  +     + ++ + G+ +V+   G + ++          +  +       
Sbjct: 34  PGFLSMQNITEILKNNSVTMILSLGMLMVLLIGG-IDISVASTLGFAGMTVGM----LFK 88

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           +  +   +   +       +    +     Y  +A +I +     I      +       
Sbjct: 89  TGLVSSTLLGFVIAIGMGAVCGLVVGLIISYGRVAPIICTMGAMYIYRGLAYLV------ 142

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                                F S  +   + +  V+L          + L+ T      
Sbjct: 143 --------ANDQWAGADALGEFKSFALTSSLGINNVILVTIVCYLLFFVILKWTKFGRNI 194

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N++A       +   K++ + +     G++GA   +      P+M    E  ++ 
Sbjct: 195 YAVGSNEEAAGISGINVHGVKIAVYTLMGTLAGLSGALSTSVYASAQPNMQYGKEMDVIA 254

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           + VI      GG  S+        IL  + +    +       
Sbjct: 255 ACVIGGVSMSGGRGSVIGALLGALILAVISKALPLIGIGALAQ 297


>gi|206559788|ref|YP_002230552.1| putative branched amino acid transport system, membrane protein
           [Burkholderia cenocepacia J2315]
 gi|198035829|emb|CAR51720.1| putative branched amino acid transport system, membrane protein
           [Burkholderia cenocepacia J2315]
          Length = 311

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 103/312 (33%), Gaps = 22/312 (7%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +     L+  M + GL+++    G+L+      Y +GAY    + +      W  + ++ 
Sbjct: 10  NGLSYGLLLFMLSAGLTLIFSVQGVLNFAHASFYMLGAYVGYGIAA--WAGFWSALVLAP 67

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +  G  G       L+        + L+++     ++ +   +  G A +       F G
Sbjct: 68  LAVGLLGAGCERALLRRVQARGHTSELLLTFGLAYLIGEGAKLAWGLAPLPAPVPPLFDG 127

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             V             +    +  +++     +  ++ + LR + I    R    ++ A 
Sbjct: 128 APVT---------VFGLALPRYRLFMMAMSTTMLVALGVLLRASRIGLVVRAALTHRAAV 178

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +L   +     + F   +A   +AG   A     +       +   +V ++V++GG+ S
Sbjct: 179 EALGYDVPRVMTALFGAGTALAALAGVIGAPLA--VIEPALAETVGSVVFAVVVIGGLGS 236

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN---------MRHTTLMVIALFLV 331
           L     A+  +          +    + +     +                +  + L  V
Sbjct: 237 LGGAFVASLAVGFAQTFAAASDTSLRDLVQWTGIALPDSVAAVSIAQLAPLVPYLLLVAV 296

Query: 332 ILMRSHSLLRLR 343
           ++ R   L   R
Sbjct: 297 LVARPRGLFGER 308


>gi|170696100|ref|ZP_02887236.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
 gi|170139003|gb|EDT07195.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
          Length = 400

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 48/349 (13%), Positives = 102/349 (29%), Gaps = 39/349 (11%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L  +A+V+    FL  G   S + + ++  Q  I  M A G+ +VV + G + L+  
Sbjct: 39  AGLLVAVALVWIAFSFLTDGVFVSDRNVTNLMRQTAITAMVALGM-LVVVAQGEIDLSVG 97

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI--- 128
              ++      +L + + +S W+ +  +  +    G+  G    +F              
Sbjct: 98  SFMSLCVTVVALLEASHLVSPWVTVAAAIGMGVLVGVWNGTWVARFGLPSFVATLGGLML 157

Query: 129 -----------------------MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
                                    + F +  + W  +        +  R        R 
Sbjct: 158 FRGIALALSGGRTISGISEGIRFFGDAFLSGPVLWVFLAIAALISLLPLRHLNDPARRRQ 217

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLS-------ASIILWLRRTAISNAWRTIRDNQK 218
            +       + V    +     LG+           A +   L  T        +  N+ 
Sbjct: 218 ALVRAILGFASVALLSWSTLSYLGLPMPVAITLVAAAILSWMLTNTVWGRHVYAVGGNRA 277

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI---- 274
           A  S    I    +++F +     G+    F        P+   F E   + ++VI    
Sbjct: 278 AARSAGIPITRHLMTSFILIGVLTGLGTLMFVGRLGSAPPESGLFLELNAIAAVVIGGAS 337

Query: 275 -LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
             GG  ++  I     ++  +      +N       +       +    
Sbjct: 338 LYGGTGTVPGILLGALLMQSLSNGLSLLNVPTAYQNIVSGIVLMLAVYV 386


>gi|239817825|ref|YP_002946735.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239804402|gb|ACS21469.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 333

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 84/288 (29%), Gaps = 16/288 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +   L      +     ++  +     + A G+  V+   G + L+     A
Sbjct: 27  VIGLVLLCIGGTLLNSDFATVDNAMNVLTRTAFIGIIAVGMCFVI-ISGGIDLSVGSMAA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + A S ++  +      W      + +       +    L           +    I   
Sbjct: 86  LIAGSVIMFIN------WAGPASGSPLMAVVMGAVLAVVLGALFGLAHGLLITKGRIEPF 139

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I+             Y AD          S +    + +S     + ++  ++       
Sbjct: 140 IVTLGTLGIFRAYLTYFADGGALTLDNDLSDLYAPVYYASLAGIPVPVWVFVIVAIIGGV 199

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +     RTA     + I  N++        +   K+  + +    +G+A   +      
Sbjct: 200 IL----NRTAYGRYVQAIGSNEQVARYAAVDVDRVKILTYVLLGVCVGIATLLYVPRLGS 255

Query: 256 ISPDMFKFSENIIVISIVILG-----GMTSLSKIAKATAILIGVVELC 298
            SP      E   + ++++ G     G  S++       +L  +  + 
Sbjct: 256 ASPTTGLLWELEAIAAVIVGGTALKGGAGSITGTVVGAILLSVISNIL 303


>gi|221204555|ref|ZP_03577572.1| ribose ABC transporter, ATP-binding protein [Burkholderia
           multivorans CGD2]
 gi|221212978|ref|ZP_03585954.1| ribose ABC transporter, ATP-binding protein [Burkholderia
           multivorans CGD1]
 gi|221167191|gb|EED99661.1| ribose ABC transporter, ATP-binding protein [Burkholderia
           multivorans CGD1]
 gi|221175412|gb|EEE07842.1| ribose ABC transporter, ATP-binding protein [Burkholderia
           multivorans CGD2]
          Length = 339

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 91/313 (29%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +    L         +     ++  QI   V+ + G++ V+   G + L+     
Sbjct: 38  LAGALIAMIALFSALSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAG-IDLSVGSVL 96

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +   ++         +   ++ A G + G  ++ +R       +L + E  +
Sbjct: 97  ALAASMVSVAALKWQWGPLPAALIGIAVATATGSLTGAVTVGWRIPSFI-VSLGVLEAAR 155

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  +         G                      F        + +    L    + 
Sbjct: 156 GLAYQLTNSRTAYIGDA--------------------FDFLSNPIALGISPAFLIAVAVM 195

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    L RT        I  N++A           K+  FA+  A  G+A  F  +  +
Sbjct: 196 IAAQFVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKILVFALMGALAGLASLFQISRLE 255

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +      +        
Sbjct: 256 AADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGANEPTKR 315

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 316 IITGAVIVVAVVL 328


>gi|153950553|ref|YP_001402476.1| ABC transporter permease [Yersinia pseudotuberculosis IP 31758]
 gi|209573020|sp|A7FMJ8|LSRC_YERP3 RecName: Full=Autoinducer 2 import system permease protein lsrC;
           Short=AI-2 import system permease protein lsrC
 gi|152962048|gb|ABS49509.1| autoinducer AI-2 ABC transporter, permease protein LsrC [Yersinia
           pseudotuberculosis IP 31758]
          Length = 351

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/316 (12%), Positives = 90/316 (28%), Gaps = 31/316 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            N  +    L  +    LL +      S +    +     I ++ A G ++V+     + 
Sbjct: 6   QNNREGTALLAILTLFALLGIIDRNYFSLQTFTMIFSSAQILILLAIGATLVM-LTRNID 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA-- 125
           ++      + A +  +     G  +      + ++    G   G+     R   +     
Sbjct: 65  VSVGSITGLCAVTVGM-ALNAGFGLAASCLFALLVGMVAGFFNGILVTWLRIPAIVATLG 123

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL +      +L   K I    A                         S        +  
Sbjct: 124 TLGLYRGLMLLLTGGKWIEGLPA----------------------DLKSLSTPILFSISP 161

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +      L  ++   L  TA   ++    DN +    L       ++ AF+++     +A
Sbjct: 162 IGWLAMLLILAMAWLLGNTAFGRSFYATGDNLQGARQLGVRTDSIRIFAFSMNGVMAALA 221

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCG 300
           G  FA+    I        E   + + V     +LGG  ++        +L  +  +   
Sbjct: 222 GIVFASQIGFIPNQTGNGLEMKAIAACVLGGISLLGGTGTIIGAILGAFLLTQIDSVLVL 281

Query: 301 MNFYYFNSLLKFDCSF 316
           +    + +        
Sbjct: 282 LRLPAWWNDFITGLVL 297


>gi|329901849|ref|ZP_08272936.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Oxalobacteraceae bacterium IMCC9480]
 gi|327548941|gb|EGF33558.1| High-affinity branched-chain amino acid transport system permease
           protein LivH [Oxalobacteraceae bacterium IMCC9480]
          Length = 294

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 102/303 (33%), Gaps = 27/303 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +Y +      I+  +  +++L       IGAY +    +  GL +W+ IP +
Sbjct: 13  LAGLGTGGLYALTGLAFVIIYKATRVVNLAIGDMLMIGAYLFFAFSAGMGLPLWIAIPAA 72

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +   A G ++    ++       I++ +++    ++L+    +        + + L   
Sbjct: 73  LLSMAAIGALVERTIIRPMLGESPISSFMVTVGLSSVLVGLVELIWTADQRRLPEFLPTK 132

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +       +    F +  + +  VLL   F    +           A R    +Q A
Sbjct: 133 PIQIGEAFLAPKIFYGFWVAVVLIVIVLLVFRFWRGGV-----------ALRATASDQGA 181

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
            +S+   +       +++++   G+AG    A               + V+ +VI GG+ 
Sbjct: 182 AYSMGINVPRVFSLPWSLAAVIAGVAGIVVGA---IGGISSSMGIFGLSVLVVVIFGGLD 238

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+        ++  +           +  L  F               L L++L+R + L
Sbjct: 239 SVLGALVGGLLIGLIEAWTGTYLGGEYKLLATFS-------------LLVLILLIRPYGL 285

Query: 340 LRL 342
              
Sbjct: 286 FGT 288


>gi|302390404|ref|YP_003826225.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Thermosediminibacter oceani DSM 16646]
 gi|302201032|gb|ADL08602.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Thermosediminibacter oceani DSM 16646]
          Length = 319

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 89/313 (28%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++  ++  L      S + + ++ +Q +I  + A G + V+ + G + L+     
Sbjct: 20  VLSILIIMCIIFGLSSKVFFSTENLLTVALQTVIIAIIAIGQTFVIITTG-IDLSIGSTI 78

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      +L        +    +  ++ G     +    + +      I TL    I +
Sbjct: 79  ALSGIITSMLLVAKVPVFF--SIMVGLLVGIIIGFINGLVIVYGKVPPFIVTLGTMSIVR 136

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I +                        +        F        + +   +  M  L+
Sbjct: 137 GIALVLTN-------------------GIPITNLPPGFTVIGSGRVLGIPIPVYIMIVLA 177

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L +T +      I  N +A            +S +++S      AG    A   
Sbjct: 178 LVFGFILSKTKLGRYNYAIGSNFEAARLSGIDTNKVLISIYSISGFLAACAGIILTARIV 237

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   V + VI     LGG  ++        ++  +      +N   F   
Sbjct: 238 SGQPTAGTGYELDAVAASVIGGASLLGGEGTVLGAVIGAFVIGVLRNGLNLLNVSAFWQQ 297

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 298 IAIGIVIIAAVYF 310


>gi|296158841|ref|ZP_06841670.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295891046|gb|EFG70835.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 290

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 92/304 (30%), Gaps = 25/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I        +Y +    + +V+ +  + +           +    + + Y LS W+ +P 
Sbjct: 6   IIGGLASGSLYALIGIAVVLVLQATDVPNFAQGEMAMFSTFVAYTMLNTYSLSWWIALPA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   +   G+++    ++       I  +I +      L     +  G         +  
Sbjct: 66  AIAFAALQGIVVQQLIIRPLLGSPTINAVIATLGLNMALHSVAGMIWGNLTNVFTSPVAD 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L            F    V         +L    +     L LR T    A R    +Q 
Sbjct: 126 LPV----------FRLFGVNVSPDSALTILVSVAMIIVFTLILRHTRAGIALRAASQDQA 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +  ++  +   A+A+ S    +AG   A         M      I   +  +LGG+
Sbjct: 176 VAKLMGISVSRSFALAWAMGSVAGLVAGILVAPILFLDVNLMAPLL--IKGFAGAVLGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +SL  +     +L  V  L        FN  L F             I + +V+++    
Sbjct: 234 SSLPGVFVGGLLLGVVENLLGAYVSGTFNEALSF-------------ILIIVVLIVAPAG 280

Query: 339 LLRL 342
           +   
Sbjct: 281 IFGR 284


>gi|170694492|ref|ZP_02885645.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
 gi|170140626|gb|EDT08801.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
          Length = 317

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 94/328 (28%), Gaps = 29/328 (8%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            + LN    I+  L V+  +          +   + ++  Q     + A G ++ V   G
Sbjct: 8   HVPLNAAAYIVAGLIVMLFVAGASVNDRFSTLSNLLNVHQQATGLALVALGQTLAV-LTG 66

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+     ++ A     L         + I V+  +S   G++ GL  L  R   L +
Sbjct: 67  GIDLSVGSLISVSATLTSGLSEATQGGWGVAIAVAIALSVLVGLVNGLLVLWLRVHPLIV 126

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
              + + +   IL        G                         F +        + 
Sbjct: 127 TLGMGAVLQGGILYYANGPAGGV---------------------PDGFDALAYGRYANVP 165

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
                +  L   +  ++R T +      + D+  +            L  +  SS   G+
Sbjct: 166 VTATVVLLLYGCVSYFMRNTRLGRYVYLVGDDDNSATLSGIPRKRVILFVYTFSSLCAGL 225

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            G + AA      P +        +  +V+            +      +  L       
Sbjct: 226 TGIYLAAQFGSGQPYLGANYTLASITPVVV-------GGTILSGGRGGVIGTLLGVYLLS 278

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVI 332
             N+L+ F    +     +  +A+   +
Sbjct: 279 MLNNLINFAGVPSQYQLIVQGVAIIAAV 306


>gi|89899879|ref|YP_522350.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89344616|gb|ABD68819.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 294

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 106/315 (33%), Gaps = 26/315 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    +    Y M + GL+++ G LG+++      Y +GA++  I+  
Sbjct: 3   IFGIPLQAFLGQLMLGLVNGAFYAMLSLGLAVIFGLLGIVNFAHGALYMLGAFAAWIMLD 62

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
           ++G++ W  + ++ +  GA G+++    LK       I  L+++     I         G
Sbjct: 63  KFGINYWYALVLAPLTVGALGVVIERLFLKHLYKIDPIYGLLLTLGLALIAEGIFRELYG 122

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G          G T             F++   +  +V+L    +       + RT +
Sbjct: 123 VSGQNYNVPELLSGAT----------NLGFMVLPNYRAWVVLVSLAVCVGTWYLIERTRL 172

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N     +    +    +  +   +A   +AG   A         +   +  
Sbjct: 173 GAYLRAGTENAALVQAFGINVPLMVMLTYGAGAALAALAGVLAAPIIQV--NPLMGSNLI 230

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+         L  +  L         + ++                
Sbjct: 231 IVVFAVVVIGGMGSIMGSILTGLSLGVIEGLTRVFYPEASSIVVFIIMVIV--------- 281

Query: 327 ALFLVILMRSHSLLR 341
                +++R   L  
Sbjct: 282 -----LMIRPAGLFG 291


>gi|325968763|ref|YP_004244955.1| ribose ABC transporter permease [Vulcanisaeta moutnovskia 768-28]
 gi|323707966|gb|ADY01453.1| ribose ABC transporter, permease protein [Vulcanisaeta moutnovskia
           768-28]
          Length = 339

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 92/324 (28%), Gaps = 29/324 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
             + L    V+    + L      S   +  +  Q     + A G  +V+  +G + L  
Sbjct: 35  IARPLIPFIVILIASITLSPQYFLSPSNLKVVLFQSAPITLLALGEGMVI-IMGSIDLTP 93

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                + A    ++    G  I L + ++ +   A G I GL   KF+          + 
Sbjct: 94  GSVAGLSALITGLVTLSTGN-IVLAMTIAVLAGLAVGSINGLLVSKFKVYSFIATLAGLE 152

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                 L                       T    +    ++      +  F+  + +  
Sbjct: 153 IWRAVDLT---------------------ITGGSPIYGLTQYSFFMNDFHTFIPLIFIIA 191

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++      L RT        I  N++A     T    AK   FA++    G+AG    
Sbjct: 192 LAINLVFWYLLTRTTWGRIIYGIGSNEEAVRLAGTHADLAKFLTFAIAGLLYGLAGVMLV 251

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFY 304
            +   +      +   +  I+  +LGG+                 IL  + ++   M   
Sbjct: 252 PTGGYVVDPWTAYGYELYAIAAAVLGGIALTGGTGHPIGPFFGALILTILTDILIIMGIT 311

Query: 305 YFNSLLKFDCSFNMRHTTLMVIAL 328
            +           +     +   L
Sbjct: 312 QYTIQEIIIGIILIAAAPALTRGL 335


>gi|289524183|ref|ZP_06441037.1| ribose ABC transporter, permease protein [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289502839|gb|EFD24003.1| ribose ABC transporter, permease protein [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 283

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 86/288 (29%), Gaps = 25/288 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            ++  Q  I  + A G+ ++    G + L+     A           + G++  + + + 
Sbjct: 1   MNILKQSSINALLALGV-LLPILTGGIDLSVGSIQAFSMCVMAFFAVKMGVNPVIAVIMG 59

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                A G   GL   K +  +  I+TL M  I + + +         AG  ++     +
Sbjct: 60  IFAGTALGYCNGLLLTKLKLPHPFISTLGMMNIARGLSLII------TAGFPISGLPLLI 113

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                  +     P+  V+    +YYV+L               T        I  N++A
Sbjct: 114 RFFGTGEMMRIPVPAILVLIVYLIYYVIL-------------NHTPFGRYVYAIGSNREA 160

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI----- 274
                  +       FA +     ++    A   +   P     +E   +   VI     
Sbjct: 161 VRLSGVNVDRVLNIVFASAGFLASLSALVLAGRVNSAYPLAGLGAELDAIAGAVIGGASL 220

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            GG  ++        I+  +      +N   +   +       +    
Sbjct: 221 FGGEGTVGGTIIGVLIMGVLRNGLNLLNVSAYWQTVIIGAVVILAVWV 268


>gi|325264497|ref|ZP_08131227.1| ribose ABC transporter, permease protein [Clostridium sp. D5]
 gi|324030159|gb|EGB91444.1| ribose ABC transporter, permease protein [Clostridium sp. D5]
          Length = 319

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/266 (11%), Positives = 81/266 (30%), Gaps = 25/266 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +      ++L        +   + ++  QI    + A G++ ++   G + L+     
Sbjct: 18  IIIAFAAVFIVLSFASPFFLTLSNMVTVLRQISFNGIVALGMTFII-ITGGIDLSVGSLL 76

Query: 75  AIGAYSYVILG---SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
            +            S   + + + I    ++S A G++ GL   K +     +    M+ 
Sbjct: 77  CLAGLVSAHYSVAGSETEMPVLIAILAGVLVSTAFGLMNGLLVAKGKLPPFIVTMATMTI 136

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                            GI +        T      +     +   +      ++++ + 
Sbjct: 137 ---------------VRGIALVYSDGRPITGFNESYKAIGQGNVLNVPIPVAIFIVMLLV 181

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                     + T        +  N+ A  +        +   + +     G+AG    +
Sbjct: 182 SGVLL-----KYTRFGRHVYALGGNENAAIASGINTAKIQTMVYVIGGVMCGIAGVALTS 236

Query: 252 SRDRISPDMFKFSENIIVISIVILGG 277
             +  SP   +    +  I+ V++GG
Sbjct: 237 RLNAASPQAAE-GYELDAIASVVIGG 261


>gi|260857378|ref|YP_003231269.1| putative carbohydrate ABC transport system permease [Escherichia
           coli O26:H11 str. 11368]
 gi|257756027|dbj|BAI27529.1| putative carbohydrate ABC transport system permease [Escherichia
           coli O26:H11 str. 11368]
 gi|323154469|gb|EFZ40670.1| ribose transport system permease protein rbsC [Escherichia coli
           EPECa14]
          Length = 329

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/321 (12%), Positives = 96/321 (29%), Gaps = 27/321 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           ++ +    +    VV  +L      +  +   I ++ +Q+ I  + A+G++ V+  LG +
Sbjct: 22  KVFRQYGGILSGMVVLIILFSFINDSFFTANNITNIILQVSIIAITAYGMTYVL-LLGDI 80

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+      +  S     I L+            +                  
Sbjct: 81  DLSVGSTIALIGTFAALGASWGIPFILLVPLSIIAALALGMI------------------ 122

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
              +     I      I             Y +   +  +I+   F +      +++   
Sbjct: 123 ---NGGLTAIAGIPSFIVTVATMGIFRGIAYIVTDGMPIMIKDDAFLALGNGEFLYIPIP 179

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  L       L +T           N++A       +   K+  F +++   G++G
Sbjct: 180 IWILIILLLINHFILTKTTFGRKIYITGGNKEAAIYSGINVTRLKIKVFMITAVLAGISG 239

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGM 301
              A+ R    P+     E   + + V+      GG  ++         +  +      M
Sbjct: 240 MILASRRYSGQPNSALSYELDAIAAAVLGGTSLNGGYGTVVGTVIGALTIGVINNGMNLM 299

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
           N  YF  ++       +    
Sbjct: 300 NVPYFYQMVVKGLVILVAVYF 320


>gi|256394820|ref|YP_003116384.1| inner-membrane translocator [Catenulispora acidiphila DSM 44928]
 gi|256361046|gb|ACU74543.1| inner-membrane translocator [Catenulispora acidiphila DSM 44928]
          Length = 316

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 93/313 (29%), Gaps = 26/313 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-----------YGLS 91
                +Y + A G ++V G L L++      +  GA   V + +            +   
Sbjct: 15  IRLGSLYALIAIGYTMVYGVLQLINFAHSEVFMSGALGGVFMLTALVGTNGDVPSGFSAF 74

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            +  + + A  +    +   L  + +R      A  ++  I       +     GK    
Sbjct: 75  EYTALALIAGAAVGAAIAFSLEQVAYRPLRKRHAPKLVYLITAIGASIFLYNLAGKLFGR 134

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
              ++     + +  +     P+     +     ++     +   + L + RT +    R
Sbjct: 135 NNLQVPESFHSGKVFVLPGTGPAGPRTVKTLDVMIIAIAVIMMVLLDLLINRTKLGAGIR 194

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
           ++  + +    +   +       F +     G+ G  +A            F   I   +
Sbjct: 195 SVAQDSETAQLMGVDVSKVISRTFIIGGLLAGVGGVLYAMF--HAVNYTMGFVPGIKAFT 252

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             +LGG+ ++        +L  V     G+    +  ++ F     +             
Sbjct: 253 AAVLGGIGNVRGAMLGGLLLGIVETFSQGIFSLEWVDVVSFVVLVAVLLI---------- 302

Query: 332 ILMRSHSLLRLRT 344
              R   +L  RT
Sbjct: 303 ---RPTGILGERT 312


>gi|322833726|ref|YP_004213753.1| inner-membrane translocator [Rahnella sp. Y9602]
 gi|321168927|gb|ADW74626.1| inner-membrane translocator [Rahnella sp. Y9602]
          Length = 336

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/321 (11%), Positives = 89/321 (27%), Gaps = 20/321 (6%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y   + L  V+      L          I ++   I I  + A G+SI +   G   L+ 
Sbjct: 27  YKWGMLLTVVLLIAAFGLASDNFLEPSNIINILRSIAIVTVIAIGVSISLAVGG-FDLSV 85

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               ++     + +   +G      I ++  +    G+      +  +   +        
Sbjct: 86  GSTASLANALVISMFVWHGFGTTEAILITLALCTLVGLFNAFLIVILKIPDMLAT----- 140

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                  +    +  G A  Y           + S         +       +  +++ M
Sbjct: 141 -------LASLFVIQGAAMTYSYGGSITENMLLPSGDMAEGTVPAVFSLLGQVPVIVIVM 193

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++ ++ L++  T        I  N  A           ++ A+ +SS   G  G   A
Sbjct: 194 AVVTIAVQLFMSLTKHGRRMYAIGGNPLAARLAGIRTARYRVIAYVMSSVLAGAGGILLA 253

Query: 251 ASRDRISPDMFKFSENIIVISIVILG------GMTSLSKIAKATAILIGVVELCCGMNFY 304
           +     S         +  ++   +G      G  +         IL  +      ++  
Sbjct: 254 SRIGS-SQVNAGGGYLMDAVAAAYIGFSLAGSGKPNALGTLLGAVILGVLSNGLVMLSVP 312

Query: 305 YFNSLLKFDCSFNMRHTTLMV 325
           Y+   +       +      +
Sbjct: 313 YYAMDIIKGLVLAVALALTYI 333


>gi|312111208|ref|YP_003989524.1| sugar ABC transporter permease [Geobacillus sp. Y4.1MC1]
 gi|311216309|gb|ADP74913.1| inner-membrane translocator [Geobacillus sp. Y4.1MC1]
          Length = 332

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 83/250 (33%), Gaps = 22/250 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
                  +   + ++  Q+ +  + A G++IV+ + G + L+     A+ +         
Sbjct: 46  FLSPTFLTTGNLLNIVRQMSVVGIVAIGVTIVIITTG-IDLSSGSVIALVSVVAASFAHP 104

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
               + + I +   +    G+I G    K +     +   +M+      L+       G 
Sbjct: 105 DTYPVIVPILIGLGLGLLTGVINGTIISKAKIAPFIVTLGMMTAARGAALLLSDGRPIG- 163

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                            +L   FRF     +  I +  ++ G   L + I+L   +T   
Sbjct: 164 -----------------NLSDSFRFVGQGTVAGIPVPIIIFGFVGLVSYILLN--KTKFG 204

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                I  N++A       +   K+  +A +    G+AG    +      P        +
Sbjct: 205 KYVYAIGGNEQAAMIAGVNVDKYKIFVYAYAGLLSGLAGIILTSRISSGQPTA-GMMYEL 263

Query: 268 IVISIVILGG 277
             I+  ++GG
Sbjct: 264 DAIAAAVIGG 273


>gi|225568532|ref|ZP_03777557.1| hypothetical protein CLOHYLEM_04609 [Clostridium hylemonae DSM
           15053]
 gi|225162760|gb|EEG75379.1| hypothetical protein CLOHYLEM_04609 [Clostridium hylemonae DSM
           15053]
          Length = 409

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/295 (11%), Positives = 88/295 (29%), Gaps = 8/295 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  +++ +          +  +  Q    ++ A G+S  +   G   L+     
Sbjct: 88  IMIALLLMIIVIMIIQPRFMQLAVLLDILTQSSTKMIVALGISFTLLIAG-TDLSAGRMV 146

Query: 75  AIGAY--SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            + A   + ++  + Y    +  +P   +I      ++          +L     +   I
Sbjct: 147 GLAAVVSTSMLQTADYANRFFPDLPHMVLIVPIIVAVIACSLFGILNGFLVAKYDMHPFI 206

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
               +       N        ++   +G      +   +     +     +  ++     
Sbjct: 207 ATLAVQVIVYGANSLYFDMEPNKSQPIGGVRPDFVLLGQKKLFQIGDFPGISVLVPIAIA 266

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               I   L +T        I  N++A       +    +  F ++S   G+AG   AA 
Sbjct: 267 FVILIWFILNKTVFGKNVYAIGGNREAAIVSGVNVFRTIMCIFILASVLYGVAGVLEAAR 326

Query: 253 RDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMN 302
               + +     E   + + V+      GG+  +S I     I   +      + 
Sbjct: 327 TAGATNNYGNGYELDAIAACVVGGVSLNGGVGKVSGIVSGVLIFTVIQYGLQFIA 381


>gi|167771882|ref|ZP_02443935.1| hypothetical protein ANACOL_03255 [Anaerotruncus colihominis DSM
           17241]
 gi|167665680|gb|EDS09810.1| hypothetical protein ANACOL_03255 [Anaerotruncus colihominis DSM
           17241]
          Length = 312

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 88/314 (28%), Gaps = 21/314 (6%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I     +V      +F     +   + ++       +  A G++ ++   G + L+    
Sbjct: 2   IALCTLLVLFAFFSIFGKRFCTADTMINLVESSYYIICMALGMTFIIA-TGGIDLSIGTV 60

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
              GA    +  + +G  +W  + +    +   G + G      +         +M    
Sbjct: 61  GMCGAIVGGVAYNVWGFPMWAALLMIIATTTLFGALNGFLVAYCKLPAFVATMGVMMI-- 118

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
                          G+                     F   F          ++ +  L
Sbjct: 119 -------------SQGVGYIISKVQTMRFPIISEPDGWFKRVFFKSLNGFPMGIIYVVIL 165

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
                  LR T +      I  N++A           +LS + VS  F G AG F+AA+ 
Sbjct: 166 FLVAAFLLRYTKLGKYACAIGSNKEATRLSGVNTKRWELSVYVVSGIFTGFAGLFYAATY 225

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
             + P      E   V ++VI      GG  ++        I+  +      +       
Sbjct: 226 TSVLPGSGSGMEMQAVAAVVIGGTSLAGGFGTIVGTLIGVFIMNVLKNGLMTVGLQQQWQ 285

Query: 309 LLKFDCSFNMRHTT 322
           +     +  +    
Sbjct: 286 VFFTGIAVLLAVLL 299


>gi|325972234|ref|YP_004248425.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy]
 gi|324027472|gb|ADY14231.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp.
           Buddy]
          Length = 344

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/320 (11%), Positives = 98/320 (30%), Gaps = 14/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L K + +L ++ ++Y   + +      S   + ++     +  +F+ G+ I++ S G   
Sbjct: 8   LKKREALLAVIILIYSAFVAIMAPTFLSYGNLTNVLKACSVTGIFSLGVLIIIISGGF-- 65

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
              V   AI   +                 +  ++  +    +      F  D+  +  +
Sbjct: 66  --DVSFTAIAQVTEYFCVYFMVNWFTHGNLLLTLLLASLVGALMGLFNGFLIDHFKMPAI 123

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I++   QN+      +      +Y                      +  V       YV 
Sbjct: 124 IITISTQNLFYGLMYVVTRGKLLYTIP-----EYIWPLADGKLFKVAQAVGSPNGFSYVT 178

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +    ++  +   LR+T        +  N+ A   +   +    +  + ++ A +G+   
Sbjct: 179 VLWFVMAVILDFVLRKTTFGRTIYWVGGNRTAAKRVGVNMFRNTMLVYGIAGAIVGIGSI 238

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
              A    + P+    +E  ++ +I+     I GG  S+        +   V      + 
Sbjct: 239 AHVAIVQTVIPNSIVGTEMAVIAAIILGGASISGGRGSVLGSILGVLLFQIVNNSLTLLK 298

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              +   +       +    
Sbjct: 299 ISSYWYNVFTGAIIILSLIL 318


>gi|152972708|ref|YP_001337854.1| putative inner-membrane translocator [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238892316|ref|YP_002917050.1| inner-membrane translocator [Klebsiella pneumoniae NTUH-K2044]
 gi|150957557|gb|ABR79587.1| putative bacterial inner-membrane translocator [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238544632|dbj|BAH60983.1| bacterial inner-membrane translocator [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 335

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 93/320 (29%), Gaps = 23/320 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L   + +L ++ ++    +     +  S   +  M     I ++ A G  +V+     + 
Sbjct: 7   LKHREALLAVVIILMIGAIGSRAPSFVSPGNLVEMFNDTAILIILALGQMMVL-LTKGID 65

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+      +L + Y     + +   A + G    ++    +   G    + TL
Sbjct: 66  LSMAANLALTGMIVALLNAHYPGIPVVALLALATLLGLLMGVINGLLVWRLGIPAIVVTL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I++ I+                      G  V S      F S      + +  + 
Sbjct: 126 GTMSIYRGIIFLLTD-----------------GGWVNSHQMSADFLSLPRSPLLGLPLLS 168

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                    +  +LR +    A  T   N  A +         +  +F +S A  G  G 
Sbjct: 169 WCAIAALLLVGYFLRYSRTGRALYTAGGNATAAYYTGINAGKMQFVSFCLSGALAGFCGY 228

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
            + +       D+    E  +V + VI     +GG   +         L  +      + 
Sbjct: 229 LWISRFAVAYVDVANGFELQVVAACVIGGISTMGGSGRVLGCLCGALFLGVINNALPVIG 288

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F  +        M    
Sbjct: 289 ISPFWQMAISGAVIVMAVLL 308


>gi|309779627|ref|ZP_07674386.1| branched-chain amino acid ABC transporter, permease protein
           [Ralstonia sp. 5_7_47FAA]
 gi|308921568|gb|EFP67206.1| branched-chain amino acid ABC transporter, permease protein
           [Ralstonia sp. 5_7_47FAA]
          Length = 298

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 93/305 (30%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+L+          A ++V L  R       L+  
Sbjct: 13  LVGGLLSGVMYSLVAIGFVLIYKTSGVLNFAQGAQLLFAALTFVSLLERGVPFPLALLIT 72

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++      I  +              +    +   I    + +               
Sbjct: 73  FTLMVLLGLGIERVVLRPLVNQPPITLFMATLGLSYVIEGVAQLVWG------------T 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F  +       +  ++ ++ R T I  A+R + D+  
Sbjct: 121 QVHALNLGISDAPLQIGGILVSSFDLFAAAIAAVMVTALSVFFRYTRIGLAFRAVADDTY 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +     + +A +     +AG  + A               +  + +++LGG 
Sbjct: 181 AAIAVGLRLPRIWATVWAAAGVIALVAGLLWGARLGVQFSLS---LVVLKALPVLVLGGF 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  + +L       +    ++           +  +A    +L++   
Sbjct: 238 DSILGAVVGGLIIGALEKLAEVYLGPFVGGGIESW---------IAYVAALAFLLVKPGG 288

Query: 339 LLRLR 343
           L  LR
Sbjct: 289 LFGLR 293


>gi|238892575|ref|YP_002917309.1| putative ribose ABC transport system permease component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238544891|dbj|BAH61242.1| putative ribose ABC transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 332

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 95/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +         ++  + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 31  ILPILILIVAVFGFIAPNFFTESNLLNITRQASINIVLAAGMTFII-LTGGIDLSVGSIL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A     +         LL   +A++ G    +     + F G    I TL      +
Sbjct: 90  GTTA--VAAMVVSLIPEFALLSIPAALMLGLLLGLFNGALVAFAGLPPFIVTLGTYTALR 147

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                          +     F      Y   + ++++    + 
Sbjct: 148 GAAYLLAD-------------------GTTVINSDISFEWIGNDYLGPVPWLVVIALAVI 188

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 189 AVCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGVMSASRLY 248

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 249 SANGNLGVGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 308

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 309 VIKGAVIIIAVLI 321


>gi|218673563|ref|ZP_03523232.1| putative sugar permease component of ABC transporter [Rhizobium
           etli GR56]
          Length = 282

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 81/286 (28%), Gaps = 19/286 (6%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                +  + A G ++V+  +G + L+  +   I A     +   YG+   + +    ++
Sbjct: 1   LELAAVIGIVAAGQTLVI-LMGGIDLSVGVIMVISAVIMGNVAITYGIPTPIAVAAGMLV 59

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
            G CG++ G      +                 + +    I      IY A+        
Sbjct: 60  GGLCGLLNGFLVAFMKLPPFI------------VTLGTWNIVMATNFIYSANETIRDADV 107

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                    F  SF      +   ++ M  L   +   L  TA       + D+ +A   
Sbjct: 108 DAQAPLLHLFAMSFRAGTAVLTLGVIAMVLLVLLLWYVLNHTAWGRHVYAVGDDPEAAKL 167

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM---- 278
                    L+ + +S      A          ISP       N+  I+  ++GG+    
Sbjct: 168 SGIQTKKVLLTVYTLSGVIAAFAAWVSIGRNGSISPSSAVTDYNLQAITATVIGGISLFG 227

Query: 279 --TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
              S+        I+  V      +       +L            
Sbjct: 228 GRGSILGTLFGAMIVGVVSMGLNMLGADPQWKVLLTGVLIIAAVAI 273


>gi|91789917|ref|YP_550869.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91699142|gb|ABE45971.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas sp. JS666]
          Length = 294

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 96/265 (36%), Gaps = 12/265 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +    Y M + GL+++ G LG+++      Y +GA++  I+  ++GL+ W  + +
Sbjct: 15  LLLGLVNGAFYAMLSLGLAVIFGLLGIVNFAHGALYMLGAFAAWIMLDKFGLNYWAALVL 74

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +  GA G+++    LK       +  L+++     I         G +G         
Sbjct: 75  APLTVGALGVVIERLFLKHLYKLDPLYGLLLTFGLALIAEGIFRELYGVSGQNYNVPELL 134

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G T             F+    +  +V+L    +       + RT +    R   +N  
Sbjct: 135 SGAT----------NLGFMTLPNYRAWVVLVSLVVCLGTWFLIERTRLGAYLRAGTENAA 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +    +  +   +A   +AG   A         +   +  I+V ++V++GGM
Sbjct: 185 LVQAFGINVPMMVMLTYGAGAALAALAGVLAAPIIQV--NPLMGSNLIIVVFAVVVIGGM 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNF 303
            S+         L  V  +      
Sbjct: 243 GSILGSVITGLALGLVEGMTRVFYP 267


>gi|299134111|ref|ZP_07027304.1| inner-membrane translocator [Afipia sp. 1NLS2]
 gi|298590858|gb|EFI51060.1| inner-membrane translocator [Afipia sp. 1NLS2]
          Length = 286

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 95/297 (31%), Gaps = 29/297 (9%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           I  LI  + A GLS++ G L ++++     + +G      +    G      + V  +  
Sbjct: 14  IWGLIIALIALGLSVIFGLLDIINIAHGDFFMVGTVLAWFVLEATGNFWIGFLIVPLICF 73

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
               +I  +     RG      +++ +     IL +   +T G     +   +       
Sbjct: 74  ILGALIQRVVIQPIRGAA--ALSIVATFGVSLILQEVVRMTFGATPRRILPPVE------ 125

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                        + Y+I+  Y         A+  L+L  T I    R +R +++   ++
Sbjct: 126 ------GTLSLFGIQYDIYRLYAAGFSIAALAAFFLFLNYTKIGTWMRAVRHDRETATAM 179

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
                   +  FAV  A  G  G   A                 +    VI+GG+ +L  
Sbjct: 180 GIPAKLVYVLTFAVGFALAGFGGVVAAPITTV--DFRGGVDLLPVCFIAVIIGGLGNLPG 237

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
            A A  +L  +  +   +       +                + +  V+L+R   L 
Sbjct: 238 TAAAAILLALMEGIIQSVANPTVARISSL-------------VLMSAVLLLRPQGLF 281


>gi|222081063|ref|YP_002540426.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725742|gb|ACM28831.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 297

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 91/304 (29%), Gaps = 16/304 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++  + ++    V+ A G+S +   +   ++      A GA+   ++  R G+ I +  
Sbjct: 3   QFVVDVLLRASDLVLIAVGMSAIYSLMKFPNIAVAQYAASGAFI-ALVLQRSGIPIVVAA 61

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ +  G   + +            +   +I S     ++     +  G      +  +
Sbjct: 62  IIAVLCVGVAAVALNELLFNRMLKISSSTAMIGSLAVSMLVSAVFLLAIGPNPTRFSLPI 121

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + + +   +  S  +     + + LL              RT +    R    N
Sbjct: 122 TRPFRVLGARMTENQLASLSITTGAILCFALLLF------------RTDLGRCMRATATN 169

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                +        + +   +S     + G       +            + V S  ILG
Sbjct: 170 GLLAEATGIDTRRTRNAVVLISGMLAALGGICLTLKGEI--NIQTGLDLLLPVFSAAILG 227

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +    A    ++     L  G+NF                 T    + L + ++ R 
Sbjct: 228 GLGNPLGAAAGAVVIALAETLITGINFGTAFGR-DLLFMPAAYATAGSFVLLVVTLIWRP 286

Query: 337 HSLL 340
             L 
Sbjct: 287 RGLF 290


>gi|55379695|ref|YP_137545.1| branched-chain amino acid ABC transporter permease [Haloarcula
           marismortui ATCC 43049]
 gi|55232420|gb|AAV47839.1| branched-chain amino acid ABC transporter permease protein
           [Haloarcula marismortui ATCC 43049]
          Length = 214

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 51/185 (27%), Gaps = 15/185 (8%)

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   S             +  +   V+     L   +   +  T      +    +
Sbjct: 39  SSQPFPQPSWASGPIALPVVGNFPRWRLGVIAITAVLVLGVYALVEYTDFGLIVQAGTLD 98

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    L   +    L  F + +A  G+AG       +          + +     V++G
Sbjct: 99  GEMVRLLGIKLSRPYLVVFGIGAALAGVAGVVGGPLANV--NPNIGTEQLVPAFLTVVIG 156

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+  +     A  +L  +  L     +  ++ +              +     LV+L+R 
Sbjct: 157 GVGKIEGAVIAGLMLGTLQVLLIQTGYAAWSQVG-------------IYALAALVLLVRP 203

Query: 337 HSLLR 341
             LL 
Sbjct: 204 QGLLG 208


>gi|20806731|ref|NP_621902.1| ribose/xylose/arabinose/galactoside ABC-type transporter permease
           [Thermoanaerobacter tengcongensis MB4]
 gi|254478098|ref|ZP_05091481.1| putative amino acid or sugar ABC transport system, permease protein
           [Carboxydibrachium pacificum DSM 12653]
 gi|20515187|gb|AAM23506.1| Ribose/xylose/arabinose/galactoside ABC-type transport systems,
           permease components [Thermoanaerobacter tengcongensis
           MB4]
 gi|214035960|gb|EEB76651.1| putative amino acid or sugar ABC transport system, permease protein
           [Carboxydibrachium pacificum DSM 12653]
          Length = 318

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/312 (9%), Positives = 81/312 (25%), Gaps = 27/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +   +          + ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 23  LIGLLGLIIAFSILSPRFLDYYNLTNVLRQTSLNAIMAVGMTFVI-LTGGIDLSVGSILA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             +     +       I  L+    + +G       +        ++A   ++       
Sbjct: 82  FSSAVTAGMLKDGMPLIIALLAGLIIGTGLGLFNGFVIIRWNIPPFIATFAMMTIARGLT 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           ++        G                         F      Y   +   ++    +  
Sbjct: 142 LVYTNGQPITG---------------------LGKAFGYIGNGYVGSIPVPIIITILVFV 180

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L+   +         N +A            L  +A+S     ++G    +  + 
Sbjct: 181 IGYYILKNNRLGRYVYATGGNLQAAKLAGINTNKIILFVYALSGFLAAVSGLIITSRLNS 240

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            +P   + +E   + ++V     + GG   +        I+  +      +N   F   +
Sbjct: 241 AAPTAGQGAELDAIAAVVLGGTSLSGGEGGIIGTLIGALIIGVLNNGLNLLNVSPFYQYI 300

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 301 VKGVVILLAIAL 312


>gi|171741888|ref|ZP_02917695.1| hypothetical protein BIFDEN_00984 [Bifidobacterium dentium ATCC
           27678]
 gi|283456919|ref|YP_003361483.1| ribose transporter permease RbsC [Bifidobacterium dentium Bd1]
 gi|306824196|ref|ZP_07457567.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Bifidobacterium dentium ATCC 27679]
 gi|309801055|ref|ZP_07695185.1| putative ribose transport system permease protein RbsC
           [Bifidobacterium dentium JCVIHMP022]
 gi|171277502|gb|EDT45163.1| hypothetical protein BIFDEN_00984 [Bifidobacterium dentium ATCC
           27678]
 gi|283103553|gb|ADB10659.1| Ribose transport system permease protein RbsC [Bifidobacterium
           dentium Bd1]
 gi|304552584|gb|EFM40500.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Bifidobacterium dentium ATCC 27679]
 gi|308222281|gb|EFO78563.1| putative ribose transport system permease protein RbsC
           [Bifidobacterium dentium JCVIHMP022]
          Length = 334

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/314 (9%), Positives = 89/314 (28%), Gaps = 24/314 (7%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++    +V  +   +          I ++ +   +  + A G++  +   G + +   + 
Sbjct: 28  LIFATWIVLLIGFSIADPHFMRMGNIVALLLASAVTGIQALGVTFTIA-TGGIDITPGLG 86

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            A+      +  + + L IWL +    +     G I GL                     
Sbjct: 87  MAMTGVITAMCMTAFHLPIWLAVLAGILSGAVLGWINGLLIA------------GFGVQP 134

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
               +    +  G A I    +  +    V             +   ++++  +  + ++
Sbjct: 135 MIATLAMMLVAQGVALILSGSKPVYTTDEVGFDQIARGTQILGIPNAVWIFLAVAVISWI 194

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
                    +T +     ++  N++A       +   K + + ++  F G++G    +  
Sbjct: 195 VL------NKTRLGRYALSMGSNEEATRMSGVNVRRWKWAVYVLAGCFTGLSGVVMTSRL 248

Query: 254 DRI-----SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                   S          ++    + GG  S++       I+  +      M+      
Sbjct: 249 SAAQPATGSGYEMYAIAAAVIGGASLAGGRASITGTVIGALIITTINNGLQIMSVPDPWQ 308

Query: 309 LLKFDCSFNMRHTT 322
            +            
Sbjct: 309 KVFLGIVVIAAVLV 322


>gi|53721177|ref|YP_110162.1| sugar ABC transport system, membrane protein [Burkholderia
           pseudomallei K96243]
 gi|52211591|emb|CAH37586.1| putative sugar ABC transport system, membrane protein [Burkholderia
           pseudomallei K96243]
          Length = 344

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 92/311 (29%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 45  VLVLLCVGFGFMTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 103

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S      WL IP +  +  A G++ G      R     +    ++ +     
Sbjct: 104 A-VASLLASNLPGWGWLGIPAALAVGLAFGVVNGGLISFLRLPPFIVTLGALTAVRGIAR 162

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    +G           F        + + ++++    + A  
Sbjct: 163 L--------------------MGNDTTIFNPQLPFAFIGNGSILGVPWLVVIALAVVAVS 202

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +      +  N +A       +   +L  +A S    G+     AA     +
Sbjct: 203 WFILRRTVLGMRIYAVGGNPEAARLSGINVRGIELFVYASSGLLAGLGALMSAARLYAAN 262

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 263 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLVGALIIAVLSNGLVLLGVSDIWQYII 322

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 323 KGLVIIGAVAL 333


>gi|225386814|ref|ZP_03756578.1| hypothetical protein CLOSTASPAR_00562 [Clostridium asparagiforme
           DSM 15981]
 gi|225047076|gb|EEG57322.1| hypothetical protein CLOSTASPAR_00562 [Clostridium asparagiforme
           DSM 15981]
          Length = 326

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 92/305 (30%), Gaps = 26/305 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++L  Y     ++ +   L L L      S     ++   + I  + + G + V+  +G 
Sbjct: 5   VKLALYRFRYAIILLAVVLGLTLATPKFFSSNNFLNILWAVSIVGIISMGATFVI-LVGR 63

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+   +  +L          +     + +    +   L             
Sbjct: 64  IDLSVGQTAALSGITAALLIKGGTPIPAAIAAACCVGAAVGIVNGLLVIQF--------- 114

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                    ++      +  G     +A  +    T      + + F  S  I +I +  
Sbjct: 115 ---------HVPEFITTLATGSIITGIAQMISKGKTISIMESKAYIFLGSGKIADIPIPI 165

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
               + FL A  IL      +      +  N +A    N  +    + A+ +S       
Sbjct: 166 FCFLLSFLIAFFILNYM--VLGRKCYAVGGNARAARVSNINVKRVVVFAYVLSGIAAAFG 223

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G   +A   + S       E  ++ +IVI      GG+ ++        ++  +      
Sbjct: 224 GIILSALNQQASASTASGYELDVIAAIVIGGASMSGGVGTIPGTVFGVVLIGLINNGLNL 283

Query: 301 MNFYY 305
           ++   
Sbjct: 284 LSVPG 288


>gi|222082853|ref|YP_002542218.1| ribose ABC transporter [Agrobacterium radiobacter K84]
 gi|221727532|gb|ACM30621.1| ribose ABC transporter [Agrobacterium radiobacter K84]
          Length = 354

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/326 (11%), Positives = 94/326 (28%), Gaps = 28/326 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFL----GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           + +    L L A++    ++  +        S     S+ +  +  ++ A G + V+   
Sbjct: 32  IAQLRAWLFLAALIVTFEIWARIDFGGTFIGSSFNWQSVAVFAVAPLLLAIGQTFVI-IS 90

Query: 64  GLLSLNCVIAYAIGAYSYVILG--SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           G + L+      + A     +   +   + + + + +  +++     + G  +       
Sbjct: 91  GGIDLSTGFIMGLAAVVAAHVTNIAGLYMPLPMAMVLGILVAMLAATVPGFINGLLISRL 150

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                +    +F         +  G                    ++   F         
Sbjct: 151 KVPPFIGTLGMFGVARGTAFLLAGGT----------------TVPVKNSYFAELGNGRFY 194

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            + Y+++        +   L +T        I  N +A       I    L  + +S+  
Sbjct: 195 GVPYLVIVAFIFVLIMHYLLSQTRFGQHNYAIGANAQAARRAGIDIKSHLLRLYMLSAVC 254

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+ GA +AA     +    +      V ++VI      GG  ++        ++  +  
Sbjct: 255 AGLGGALYAARFTAGAAQAGEPLLLDSVAAVVIGGASLFGGSGTIIGTVAGALVIAVIQY 314

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               MN   F   +       +    
Sbjct: 315 GLVFMNVEPFWQFIAVGIVIIISVLI 340


>gi|189022257|ref|YP_001931998.1| Bacterial inner-membrane translocator [Brucella abortus S19]
 gi|260544224|ref|ZP_05820045.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038]
 gi|260568630|ref|ZP_05839099.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40]
 gi|260757153|ref|ZP_05869501.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870]
 gi|260759477|ref|ZP_05871825.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292]
 gi|260762721|ref|ZP_05875053.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882962|ref|ZP_05894576.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68]
 gi|261215534|ref|ZP_05929815.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya]
 gi|261216664|ref|ZP_05930945.1| inner-membrane translocator [Brucella ceti M13/05/1]
 gi|261219897|ref|ZP_05934178.1| inner-membrane translocator [Brucella ceti B1/94]
 gi|261313862|ref|ZP_05953059.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10]
 gi|261318898|ref|ZP_05958095.1| inner-membrane translocator [Brucella pinnipedialis B2/94]
 gi|261319533|ref|ZP_05958730.1| inner-membrane translocator [Brucella ceti M644/93/1]
 gi|261323700|ref|ZP_05962897.1| inner-membrane translocator [Brucella neotomae 5K33]
 gi|261749790|ref|ZP_05993499.1| inner-membrane translocator [Brucella suis bv. 5 str. 513]
 gi|261753033|ref|ZP_05996742.1| inner-membrane translocator [Brucella suis bv. 3 str. 686]
 gi|261756258|ref|ZP_05999967.1| bacterial inner-membrane translocator [Brucella sp. F5/99]
 gi|265985771|ref|ZP_06098506.1| inner-membrane translocator [Brucella sp. 83/13]
 gi|265987099|ref|ZP_06099656.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1]
 gi|265993514|ref|ZP_06106071.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether]
 gi|265996760|ref|ZP_06109317.1| inner-membrane translocator [Brucella ceti M490/95/1]
 gi|265998949|ref|ZP_05464423.2| bacterial inner-membrane translocator [Brucella melitensis bv. 2
           str. 63/9]
 gi|306839328|ref|ZP_07472144.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Brucella sp. NF 2653]
 gi|189020831|gb|ACD73552.1| Bacterial inner-membrane translocator [Brucella abortus S19]
 gi|260097495|gb|EEW81369.1| bacterial inner-membrane translocator [Brucella abortus NCTC 8038]
 gi|260155295|gb|EEW90376.1| bacterial inner-membrane translocator [Brucella suis bv. 4 str. 40]
 gi|260669795|gb|EEX56735.1| inner-membrane translocator [Brucella abortus bv. 4 str. 292]
 gi|260673142|gb|EEX59963.1| inner-membrane translocator [Brucella abortus bv. 2 str. 86/8/59]
 gi|260677261|gb|EEX64082.1| inner-membrane translocator [Brucella abortus bv. 6 str. 870]
 gi|260872490|gb|EEX79559.1| inner-membrane translocator [Brucella abortus bv. 9 str. C68]
 gi|260917141|gb|EEX84002.1| inner-membrane translocator [Brucella abortus bv. 3 str. Tulya]
 gi|260918481|gb|EEX85134.1| inner-membrane translocator [Brucella ceti B1/94]
 gi|260921753|gb|EEX88321.1| inner-membrane translocator [Brucella ceti M13/05/1]
 gi|261292223|gb|EEX95719.1| inner-membrane translocator [Brucella ceti M644/93/1]
 gi|261298121|gb|EEY01618.1| inner-membrane translocator [Brucella pinnipedialis B2/94]
 gi|261299680|gb|EEY03177.1| inner-membrane translocator [Brucella neotomae 5K33]
 gi|261302888|gb|EEY06385.1| inner-membrane translocator [Brucella pinnipedialis M163/99/10]
 gi|261736242|gb|EEY24238.1| bacterial inner-membrane translocator [Brucella sp. F5/99]
 gi|261739543|gb|EEY27469.1| inner-membrane translocator [Brucella suis bv. 5 str. 513]
 gi|261742786|gb|EEY30712.1| inner-membrane translocator [Brucella suis bv. 3 str. 686]
 gi|262551057|gb|EEZ07218.1| inner-membrane translocator [Brucella ceti M490/95/1]
 gi|262764384|gb|EEZ10416.1| inner-membrane translocator [Brucella melitensis bv. 3 str. Ether]
 gi|263091373|gb|EEZ15909.1| bacterial inner-membrane translocator [Brucella melitensis bv. 2
           str. 63/9]
 gi|264659296|gb|EEZ29557.1| inner-membrane translocator [Brucella pinnipedialis M292/94/1]
 gi|264664363|gb|EEZ34624.1| inner-membrane translocator [Brucella sp. 83/13]
 gi|306405576|gb|EFM61839.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Brucella sp. NF 2653]
 gi|326410211|gb|ADZ67275.1| inner-membrane translocator [Brucella melitensis M28]
 gi|326553504|gb|ADZ88143.1| inner-membrane translocator [Brucella melitensis M5-90]
          Length = 313

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 52/317 (16%), Positives = 110/317 (34%), Gaps = 22/317 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I  L+  M + GL+++ G +G+L+      Y +GAY       +     WL I +
Sbjct: 8   VLNGAIYGLLLFMVSAGLTLIFGMMGVLNFAHASFYMMGAYFAY--TLQPLTGFWLAILI 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I G  G+++    L+    +     L+++     ++ +   I  G          + 
Sbjct: 66  APVIVGIVGVLVERFILRRVHAFGHAHELLVTFGLSVVIAEVIKIFYGN---------FA 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + + ++F  F    V Y  +  ++      +   I L L RT I    R+     +
Sbjct: 117 VEYRIPAALQFSAFDLGGVSYPFYRLFIGAVALVMFLLIYLLLTRTRIGIVVRSAIYRPR 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-----------FKFSENI 267
              +L   +    +  F V +   G+AG+   A                           
Sbjct: 177 MVEALGHNVPLVFMGVFGVGAFLAGLAGSVAGAFYTTNPNMALELGVMVFVVVVVGGLGS 236

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  ++     +  LS +A    + I  +    G+  Y            +    TL    
Sbjct: 237 LGGAMFASLLIGILSSVAVGVKVSIASLLDYVGLGDYAREIGGVLTLEVSSIAATLPFFL 296

Query: 328 LFLVILMRSHSLLRLRT 344
           + +V+L+R   L   + 
Sbjct: 297 MLIVLLVRPSGLFGAKE 313


>gi|306518983|ref|ZP_07405330.1| ribose ABC transporter, permease protein [Clostridium difficile
           QCD-32g58]
          Length = 324

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 96/280 (34%), Gaps = 26/280 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +      +  V+  +++ +      +   + ++G QI I  + A G++ V+   G + L+
Sbjct: 24  RDQGSAAVGLVIIFIIMSVASSNFLTLDNLINVGRQISINAILAVGMTFVI-ITGGIDLS 82

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+    +      Y   IW+ + ++  I    G+I G      +           
Sbjct: 83  VGAVIALVGTFWATTVVNYNAPIWVGMILALAIGTILGVIKGAIISTQKLPPF------- 135

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 + +    I +G + ++   R           +    F      Y   +   ++ 
Sbjct: 136 -----IVTLAMLTIISGASFVFTGGRPI--------SVNTDAFKMLGRGYIGPIPIPVII 182

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           M  +  +    L+RT        +  N++A       +    +  +A++     +AG   
Sbjct: 183 MIIVVIAGHFLLKRTNFGRHVHAVGGNEEAARLCGVKVNKVIVKVYALAGLLTALAGIIL 242

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKI 284
           ++     SP +   +E   + ++V     ++GG  S+   
Sbjct: 243 SSRLASGSPTVGDGAELDAIAAVVLGGTNMMGGSGSIVGT 282


>gi|186476994|ref|YP_001858464.1| monosaccharide-transporting ATPase [Burkholderia phymatum STM815]
 gi|184193453|gb|ACC71418.1| Monosaccharide-transporting ATPase [Burkholderia phymatum STM815]
          Length = 337

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/288 (11%), Positives = 83/288 (28%), Gaps = 12/288 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               VV  +   L      +   + ++  +     + A G++ V+   G + L+     A
Sbjct: 27  LAGLVVLCIAGTLLNRDFATVDNMMNVLTRTSFIGIIAVGMTFVI-ISGGIDLSVGSMAA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +              ++       A       +I    +    G +     L++++    
Sbjct: 86  L----IAGSMIWLMNALAASPGGHAFAPLTIVLIGIASAFVLGGAFGCAHGLLITKGRIE 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             I           +          T   +L   +       ++ + +   +        
Sbjct: 142 PFIVTLGTLGIFRAVLTWLADGGALTLDNNLADLYGPVYYASLFGVPVPIWVFLCVAAGG 201

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           ++IL   RTA     + I  N++        +   K+  + +    +G+A   +      
Sbjct: 202 ALILN--RTAFGRHVQAIGSNEQVARYAAIRVDTVKIVTYVLLGVCVGVATVLYVPRLGS 259

Query: 256 ISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELC 298
            +P      E   + ++V+      GG   +        +L  +  + 
Sbjct: 260 ATPTTGLLWELEAIAAVVVGGTALKGGEGRVVGTVIGAVLLSVIANIL 307


>gi|52424254|ref|YP_087391.1| AraH protein [Mannheimia succiniciproducens MBEL55E]
 gi|52306306|gb|AAU36806.1| AraH protein [Mannheimia succiniciproducens MBEL55E]
          Length = 310

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 97/322 (30%), Gaps = 27/322 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++LN  D    +  V+  ++         +   + ++  Q  +    A G+++V+ S G 
Sbjct: 4   IKLNVRDAGTLVGLVIIFVVFSFLSPVFFTVPNLLNILQQSSLNAAIALGMTLVIISAG- 62

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+ A     L          ++    + S        L +      Y  + 
Sbjct: 63  IDLSVGPTAALSAVLGASLMVSGVPVPIAVLGALCIGSLGGLFNGVLIA------YAGLQ 116

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
             I++    ++      I  G   I+     +                         +  
Sbjct: 117 PFIVTLGSLSLYRALSLIYTGGNPIFGIPAEFRAFMN---------------GSLFGIPS 161

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            +L +  ++  + + L +T +      +  N++A    +  +   K++ + +S     +A
Sbjct: 162 SILIVASIALILWVVLNKTPLGEYIFAVGGNEEAARVCSVPVAKTKVAVYMISGFLASVA 221

Query: 246 GAFFAASRDRISPDMFKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G           P +    E        +    ++GG  S+        IL  +      
Sbjct: 222 GLVLVGRLGAADPTLGNLWELDAIAAAAIGGASLMGGKGSIIGTILGAVILGALRNGLTL 281

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +N   F  LL       +    
Sbjct: 282 LNIQAFYQLLATGLIIIVAMLI 303


>gi|297203932|ref|ZP_06921329.1| ABC transporter membrane protein [Streptomyces sviceus ATCC 29083]
 gi|297148533|gb|EDY57157.2| ABC transporter membrane protein [Streptomyces sviceus ATCC 29083]
          Length = 359

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/320 (13%), Positives = 98/320 (30%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +  + L AV   +   +     +    + ++  Q     + A  +++++   G   
Sbjct: 37  LARPEVGVFLGAVAVWVFFLIAAPPVREGSSMANILYQSSTIGIMALPVALLM-IGGEFD 95

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A    A +  +   +  L++W+ + V+ +++   G + G   +K       + TL
Sbjct: 96  LSSGVAVITSALTASMFAFQLTLNVWVGVVVALLVALGIGFLNGWLVVKTGLPSF-LITL 154

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I Q + +    +  G         +       +     F      +   I  + V 
Sbjct: 155 GTFLILQGVNLAVTKLVTGNVATDDISDMDGFDQAKKVFANSFEVAGVQIKITIIYWLVF 214

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +            RT   N    +  N+++  ++   + F K+S F +        G 
Sbjct: 215 AALATWVLL------RTKYGNWIFAVGGNKESARAVGVPVKFTKISLFMLVGFAAWFVGM 268

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
               S + +        E I + + VI      GG  S         +   V +     N
Sbjct: 269 HNLFSFNTVQSGEGVGQELIYISAAVIGGCLLTGGAGSAIGPVFGAFMFGMVQQGIVYAN 328

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
           +                   
Sbjct: 329 WNPDWFKAFLGVMLLGAVMI 348


>gi|328887132|emb|CCA60371.1| putative ABC transporter permease protein [Streptomyces venezuelae
           ATCC 10712]
          Length = 430

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/363 (12%), Positives = 95/363 (26%), Gaps = 61/363 (16%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L  ++   +         S + +  +  QI+   M A G+  V+  LG + L+     
Sbjct: 60  VVLAVIIIWTVFGSLNSTFLSAQNLSDLSQQIVGTGMIAVGIVFVL-LLGEIDLSVGSVS 118

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A  + +L    G++ WL + V+     A G+I G    K       +          
Sbjct: 119 GLCAAIFAVLNVLNGMNEWLALLVAIAGGAAVGLIHGFFFAKVGVPAFVVTLAGNLAWNG 178

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM---- 190
            +L        G +G         +     ++              + ++     +    
Sbjct: 179 LMLQVL-----GTSGTVNIPGESIVSKLYSTIYHSPAAAYVTAAVGVGLFLAASLLDAQR 233

Query: 191 ---------------------------------------------CFLSASIILWLRRTA 205
                                                          L   +   LRRT 
Sbjct: 234 RRAARVPFRPVGEIVLRTVVIAALAFAAAYILNQYQGLPLALLIFLILLVLLDFVLRRTT 293

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
                  +  N +       ++ F ++S F+++     + G F A      S      + 
Sbjct: 294 YGRRIFAVGGNIEGARRAGISVAFVRMSVFSIAGTMAAIGGIFLAGQIQSASQTSGGGNL 353

Query: 266 NIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            + VI+  ++      GG  S+        ++  +      M        +         
Sbjct: 354 LMNVIAAAVIGGTSLFGGRGSVWSALLGALVIGSIQSGMNIMGVSNAVQFMITGSVLLAA 413

Query: 320 HTT 322
              
Sbjct: 414 VVV 416


>gi|300311610|ref|YP_003775702.1| sugar ABC transporter permease [Herbaspirillum seropedicae SmR1]
 gi|300074395|gb|ADJ63794.1| ABC-type sugar transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 328

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 103/318 (32%), Gaps = 27/318 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K    L    +   ++         S     ++   I   V+ + G++ ++   G + L+
Sbjct: 21  KNYLGLMAALLAMCVMFAFLSENFLSAATFITLSNDIPPLVVMSVGMTFILIIGG-IDLS 79

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+ A    +   R+G  ++   P+  +++  CG + G+ S+ +R     ++  ++
Sbjct: 80  VGSVMALAASMLSMAMVRWGWPLYAAAPLGVVVAALCGTLTGMVSVHWRIPSFIVSLGVL 139

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                                 +A  L +  T  R+                 M    L 
Sbjct: 140 E---------------------IARGLAYQVTNSRTEYIGSAVDVISSPILFGMSPAFLS 178

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              +     L L RT +   W  I  N++A          +K+ AFA+  A  G+A  F 
Sbjct: 179 AIAIVIIAQLVLTRTVLGRYWIGIGTNEEAVRLSGVNPNPSKILAFALMGALAGIAALFQ 238

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            +  +   P+     E  ++ ++VI     +GG  S+        I+  +      +   
Sbjct: 239 VSRLEAADPNGGVGMELQVIAAVVIGGTSLMGGRGSIVSTFIGVLIISVLEAGLAQVGVS 298

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +       +    
Sbjct: 299 EPMKRIITGAVIVVAVIL 316


>gi|226362518|ref|YP_002780296.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226241003|dbj|BAH51351.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 304

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/296 (12%), Positives = 83/296 (28%), Gaps = 28/296 (9%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +   L  +L    + S   IDS+     I  + A G +IVV   G + L+      + A 
Sbjct: 1   MALFLFSWLIAPGSISGSAIDSLLPFAGILAIAAIGQTIVVMLKG-IDLSLPGMMTLAAL 59

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                   +         ++A++  A   ++            ++  L+ +     +L+ 
Sbjct: 60  VSSQYAQDH------GSILAALLVVAAIAVVVGLVNGIVVSAFSVTPLVATLAVNAVLMG 113

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                +G         +          +                   +     L    + 
Sbjct: 114 AALAYSGGTPTRAPQSVSDFALEKTVGVSNT----------------VWLAVLLMIVTVF 157

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
              RTA       +  N++   +        K+S +  ++     AG   A      + +
Sbjct: 158 ATGRTAWGRRVVAVGSNERTARAAGVRTSRIKISGYVAAALCYSGAGVLLAGYVSTPNTN 217

Query: 260 MFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                    + ++V+      GG  ++   A     L  + +L   +        L
Sbjct: 218 AGTSYLLPAIAAVVVGGTALTGGRGNIIGTAVGALFLSQLTQLVLSLGAPSSTQFL 273


>gi|209519241|ref|ZP_03268043.1| Monosaccharide-transporting ATPase [Burkholderia sp. H160]
 gi|209500321|gb|EEA00375.1| Monosaccharide-transporting ATPase [Burkholderia sp. H160]
          Length = 337

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 84/288 (29%), Gaps = 12/288 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               ++  +   L      +   + ++  +     + A G++ V+   G + L+     A
Sbjct: 27  LAGLILLCIAGTLLNRDFATLDNLMNVLTRTSFIGIIAVGMTFVI-ISGGIDLSVGSMAA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + A   + L +              +I     +   +    F   +  + T    E F  
Sbjct: 86  LIAGIMIWLMNGLAAGAAGHALPPLVIVTIGIVAAFVLGALFGCAHGLLITKGRIEPFIV 145

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L            +     L    +        +      V   I+++ V+       A
Sbjct: 146 TLGTLGIFRAVLTWLADGGALTLNDSLSDLYGPVYYASLFGVPVPIWVFLVVA------A 199

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              L L RTA     + I  N++        +   K+  + +    +G+A   +      
Sbjct: 200 GGALILNRTAFGRHVQAIGSNEQVARYAAIRVDTVKIVTYVLLGICVGVATVLYVPRLGS 259

Query: 256 ISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELC 298
            +P      E   + S+V+      GG   +        +L  +  + 
Sbjct: 260 ATPTTGLLWELEAIASVVVGGTALKGGEGRVIGTVIGAILLSVIANIL 307


>gi|126734291|ref|ZP_01750038.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter sp. CCS2]
 gi|126717157|gb|EBA14021.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter sp. CCS2]
          Length = 332

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/327 (11%), Positives = 96/327 (29%), Gaps = 33/327 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---------------- 82
           + +  +  ++Y + A G  ++  + G+ +    +     A +                  
Sbjct: 12  VINGLMAGVLYALVALGFVLIYKASGIFNYAQGVMALFSALTLAGIMSGQVPFAHLINAI 71

Query: 83  ----ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               I    + + +   I ++ ++       +     +       I   + +      L 
Sbjct: 72  FGTDIHYFGWNVPVLAAIILTLIVMVIFAWCVQRFVFRHLVGQEPIILFMATIGLAYFLE 131

Query: 139 KWKPITNGKAGIYVADRLYFLGTTV--RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
               +  G     +   L   G+     +              +       +    L A 
Sbjct: 132 GVGDLMWGSDIKTLNVGLPQGGSRFVEDATAGLGGDDFFGFFIDKLDMVATVVAIILVAG 191

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           +I + + T    A R + D+ +A  S+  ++ F  +  ++++     +AG  + A     
Sbjct: 192 LIAFSQYTKQGRAMRAVADDHQAALSVGISLNFIWVLVWSLAGLVALVAGIMWGAKSGVQ 251

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
                     +  + +++LGG TS+        I+    +L   +    +      +   
Sbjct: 252 FSLS---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEYLIGAPYLGGATENW-- 306

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLR 343
                    +   L ++ R   L   R
Sbjct: 307 ------FAYVLALLFLVFRPQGLFGER 327


>gi|86360552|ref|YP_472440.1| branched chain amino acid ABC transporter permease [Rhizobium etli
           CFN 42]
 gi|86284654|gb|ABC93713.1| probable branched-chain amino acid ABC transporter, permease
           protein [Rhizobium etli CFN 42]
          Length = 295

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 48/316 (15%), Positives = 104/316 (32%), Gaps = 26/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    I    Y + + GL+I+ G L +++      Y +GA+   +L +
Sbjct: 4   IFGIPLQALLGQLLIGLINGSFYALLSLGLAIIFGLLRVINFAHGAQYMLGAFVAYLLLT 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+  W  + ++ +I G  G I+    L+   D   +  L+ +      +        G
Sbjct: 64  YAGIGYWPSLILAPVIVGIAGAIIERLFLRRLYDLDPLYGLLFTFGLALAVEGTFRYLYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G   A      G               F+   I+  +V++    +     L + +T +
Sbjct: 124 SSGQPYATPAALAG----------GANLGFMFLPIYRGWVVVVSLVICLGTWLLIEKTKL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N          +       +A+ +     AG   A         +   +  
Sbjct: 174 GAYLRAATENAVLVQVFGVNVPVLLTLTYALGAGLAAFAGVLAAPIYQV--SPLMGSNMI 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+        +L     L                  +      ++ +
Sbjct: 232 IVVFAVVVVGGMGSIMGAIITGYVLGIAEGLTKVF--------------YPEASNIVIFV 277

Query: 327 ALFLVILMRSHSLLRL 342
            + +V+L+R   L   
Sbjct: 278 IMAIVLLIRPAGLFGR 293


>gi|122545615|sp|Q2PBM2|LSRC_PHOTE RecName: Full=Autoinducer 2 import system permease protein lsrC;
           Short=AI-2 import system permease protein lsrC
 gi|84452502|emb|CAI91186.1| LsrC protein [Photorhabdus temperata subsp. temperata]
          Length = 333

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 93/316 (29%), Gaps = 31/316 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            N  +    +  +    LL +      S + +  +     I ++ A G ++V+     + 
Sbjct: 6   QNNREITALIAILALFGLLGVIDRQYFSLQTVTLIFSSAQILILLAMGATLVM-LTRNID 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA-- 125
           ++      + A    +     G S+ +    + ++    G+  G+     +   +     
Sbjct: 65  VSVGSITGLCAVIMGM-SLNAGFSLPVSCLFTLLLGMCAGLFNGVLVTWLKIPAIVATLG 123

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL +   F  +L   K I      +       +L  +                       
Sbjct: 124 TLGLYRGFMLLLTDGKWIEGLPDELKSLSAPLWLNISPIGW------------------- 164

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
               +  L  ++   L +TA    +    DN +    L       ++ AF+V+     +A
Sbjct: 165 ---LLMILVLAMAWILAKTAFGRGFYATGDNLQGARQLGVRTNSIRIIAFSVNGVMAALA 221

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCG 300
           G  FA+    I        E   + + V     +LGG  S+         L  +      
Sbjct: 222 GIVFASQIGFIPNQTGNGLEMKAIAACVLGGISLLGGTGSVIGAILGAFFLTQINSGLVL 281

Query: 301 MNFYYFNSLLKFDCSF 316
           +    + +        
Sbjct: 282 LKLPAWWNDFIAGFVL 297


>gi|50119061|ref|YP_048228.1| xylose transport system permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49609587|emb|CAG73020.1| xylose transport system permease [Pectobacterium atrosepticum
           SCRI1043]
          Length = 393

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/357 (11%), Positives = 97/357 (27%), Gaps = 47/357 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             ++  +  +     ++  GA  S + + ++  Q  I  + A G+  V+ S   + L+  
Sbjct: 30  YVMIAAIIAIMLFFTYMTDGAYLSARNLSNLLRQTAITGILAVGMVFVIISA-EIDLSVG 88

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA------ 125
               +   +  I    +G  + L I V+  +    G   G      +     +       
Sbjct: 89  SMMGLLGGAAAIFDVWFGWPLPLTIVVTLALGLLLGAWNGWWVAYRKVPSFIVTLAGMLA 148

Query: 126 -----------------------------------TLIMSEIFQNILIKWKPITNGKAGI 150
                                                    +   I  +W+  ++     
Sbjct: 149 FRGILIGITNGTTVSPTSEAMSQIGQSYLPSGIGFMFGAIGLMVFIGWQWRRRSSRARLG 208

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
              +                      +     +   +L +  L    I    RTA     
Sbjct: 209 LPINPPAGDVGRQTVTALVVLGAIYLLNDYRGVPTPVLVLTLLMLGGIFLATRTAFGRRI 268

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N  A       +   K++ FA++   + +AG   ++     SP     +E   + 
Sbjct: 269 YAVGGNIDAARLSGVNVERTKMAVFAINGLMVAVAGLILSSRLGAGSPSAGNIAELDAIA 328

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 329 ACVIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYVVKGGILLLAVWM 385


>gi|290955509|ref|YP_003486691.1| ABC transporter permease [Streptomyces scabiei 87.22]
 gi|260645035|emb|CBG68121.1| putative ABC transporter permease [Streptomyces scabiei 87.22]
          Length = 339

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/321 (13%), Positives = 99/321 (30%), Gaps = 29/321 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L ++D  +    VV  LL F  +    +   +  +    L   + A  ++++V   G + 
Sbjct: 15  LKRWDSAVGATLVVVLLLSFSTVDGFGNALNLSFLIGNTLPIALVALPMTLLV-VSGEID 73

Query: 68  LNCVIAYAI-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           L+      + GA    +      +   + I +   +       + +  L      + I T
Sbjct: 74  LSVASTAGLSGAVMGALWNQGLTIEAIIPICLLLGVVCGLINGLLVTRLGLSSLAVTIGT 133

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L        I++    +T         D            I     P +F+ + + +   
Sbjct: 134 LAAYRGIAQIVLGSDAVT---------DFPTQYLDFAAGRIGDSFVPRAFIPFLVLLVIA 184

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           ++ +             T    +   I  +++A       +   KL  F V+     + G
Sbjct: 185 VIALHA-----------TPFGRSLFAIGASEEAARFTGIRVKRQKLILFTVTGLMASLTG 233

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCG 300
            F+A        D       + VI+ V+LGG+       +L        +L  +  +   
Sbjct: 234 IFWALHYASARYDNAT-GLELSVIAAVLLGGIDFDGGKGTLGGAIAGVFLLGTLQNVMSL 292

Query: 301 MNFYYFNSLLKFDCSFNMRHT 321
            +    + ++       +   
Sbjct: 293 QDVSAQSQIVVTGVLLVLSVL 313


>gi|76818816|ref|YP_336811.1| ABC transporter permease [Burkholderia pseudomallei 1710b]
 gi|226198722|ref|ZP_03794286.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei Pakistan 9]
 gi|254189587|ref|ZP_04896097.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|254263046|ref|ZP_04953911.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 1710a]
 gi|76583289|gb|ABA52763.1| ABC transporter permease protein [Burkholderia pseudomallei 1710b]
 gi|157937265|gb|EDO92935.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|225929162|gb|EEH25185.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei Pakistan 9]
 gi|254214048|gb|EET03433.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia pseudomallei 1710a]
          Length = 344

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 92/311 (29%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 45  VLVLLCVGFGFMTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 103

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S      WL IP +  +  A G++ G      R     +    ++       
Sbjct: 104 A-VASLLASNLPGWGWLGIPAALAVGLAFGVVNGGLISFLRLPPFIVTLGALT------A 156

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++      G        +L F      S++         +      +++L          
Sbjct: 157 VRGIARLMGNDTTIFNPQLPFAFIGNGSILGVPWLVVIALAVVAVSWFIL---------- 206

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
               RRT +      +  N +A       +   +L  +A S    G+     AA     +
Sbjct: 207 ----RRTVLGMRIYAVGGNPEAARLSGINVRGIELFVYASSGLLAGLGALMSAARLYAAN 262

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 263 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLSNGLVLLGVSDIWQYII 322

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 323 KGLVIIGAVAL 333


>gi|330836308|ref|YP_004410949.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Spirochaeta coccoides DSM 17374]
 gi|329748211|gb|AEC01567.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Spirochaeta coccoides DSM 17374]
          Length = 362

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 85/271 (31%), Gaps = 12/271 (4%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y   +  +    V+ A G+++VV S     ++     A+ A   V L      +  + + 
Sbjct: 54  YTVDIINRASELVILAVGMTLVVASSSGADISVGAVSALAAAVCVRLLGSSYETYAVPLF 113

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            S +     G++ G  +         +A + +  +   +++        +          
Sbjct: 114 ASVIFCLLTGLVCGSFNGFL------VAKMKIQPMVATLILFTAGRGIAQLVSAREINGT 167

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +   +  +           +  + +   +     +   + L LR+TA     +T+  N 
Sbjct: 168 MVSGQILYVRMDSFRDIGGFLPGVVVPTPVFIAAGVVLLVHLVLRKTAFGLYVKTVGINS 227

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           KA   +           +A+     G+AG   ++       +    +  +  I  V LGG
Sbjct: 228 KAGRLVGINSSRIIFLTYALCGLMAGVAGLIASSRIYSSDANNIGLNMELDAILAVALGG 287

Query: 278 MT------SLSKIAKATAILIGVVELCCGMN 302
            +      SLS        +  +      M 
Sbjct: 288 NSLGGGKFSLSGSVIGAITIQALTTSLYAMG 318


>gi|302188305|ref|ZP_07264978.1| inner-membrane translocator [Pseudomonas syringae pv. syringae 642]
          Length = 325

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/322 (12%), Positives = 96/322 (29%), Gaps = 27/322 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LRL+     L L+ ++  L+L        + +    +  Q  I  + A G++ V+     
Sbjct: 18  LRLSLDRFGLPLVFILLCLVLAFASEYFMTWRNWMDILRQTSINGILAVGMTYVI-LTKG 76

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A       ++ ++    +  +       +    +   + +      ++A  
Sbjct: 77  IDLSVGSILAFAGLCSALVATQGYGLLAAVSAGMFAGAMLGVVNGFMVANLSIPPFVATL 136

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            ++        ++                     G+ V  L   +       +  I +  
Sbjct: 137 GMLSIARGMTFILN-------------------DGSPVTDLPEEYLALGIGRVGPIGVPI 177

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++  +  L   ++L  R T        +  N+K+  +    +     S + VS    G+A
Sbjct: 178 IIFAVVALIFWMVL--RYTTYGRYVYAVGGNEKSARTSGIGVRKVMFSVYVVSGLLAGLA 235

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G   +A      P      E   + ++VI      GG  S+        ++  +      
Sbjct: 236 GVVLSARTTSALPQAGMSYELDAIAAVVIGGTSLSGGTGSIVGTLFGALLIGVINNGLNL 295

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +    +   +            
Sbjct: 296 LGVSSYYQQVAKGLIIVFAVLI 317


>gi|190893839|ref|YP_001980381.1| sugar ABC transporter permease [Rhizobium etli CIAT 652]
 gi|190699118|gb|ACE93203.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           CIAT 652]
 gi|327190144|gb|EGE57249.1| putative sugar ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 341

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 90/324 (27%), Gaps = 21/324 (6%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGI-QILIYVMFAWGLSIVVGSL 63
              L+ +  ++ +  +   L       +        ++ I Q+ +  + A G++ V+   
Sbjct: 22  PTELSIFLVLVGIALIYEALGWMFIGQSFLMNSQRLTIMILQVSVIGIIAVGVTQVI-IT 80

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+      + A                              +  LP+L      L 
Sbjct: 81  GGIDLSSGSVVGMTAMIATSFAQSSTWG-----------RAVFPSLTDLPALVPIMIGLL 129

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           I           I     P      G++V+ R      T    +        F+  + + 
Sbjct: 130 IGAAAGLANGALIAYTKIPPFIATLGMFVSARGVAKWYTKGQPVSGITEQFHFIGTKAWP 189

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
             V L +        + LR T        I  N +A       I    +  + ++    G
Sbjct: 190 VVVFLVVA---LIFHIALRYTRYGKFTYAIGANPQAARVSGINIEAHLVKVYVIAGLLAG 246

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +AG   AA  +     M    E   + + VI      GG+  ++     T IL  +    
Sbjct: 247 LAGIVTAARAETAQASMGVGYELDAIAATVIGGTSLTGGVGRITGTVIGTIILGVMTSGF 306

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTT 322
             +    +   +            
Sbjct: 307 TFLRIDAYYQEIVKGFIIVAAVVI 330


>gi|170696294|ref|ZP_02887425.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
 gi|170138775|gb|EDT06972.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
          Length = 364

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 78/266 (29%), Gaps = 10/266 (3%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
                L VV  L++            +  +        +FA G ++VV + G + ++   
Sbjct: 52  WFTVALIVVTCLIVGAINPRFFQLATLFDLLHSATTMSLFALG-TLVVLASGGIDVS--- 107

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
             AI A +   +                +++GA G +M           L   +LI++  
Sbjct: 108 FTAIAALTMYGITKAVFAFWPDAPFALILVAGAVGGVMLGVVNGLLVHRLKAPSLIVTIG 167

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            Q +         G                +           +       +   +L +  
Sbjct: 168 TQYLYRGLLLTFIGTTFFMNIPHSMDRFGRIPLFFYH-----TADGLRAVLPVSVLALVA 222

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +      L RT +      +  +      L   +    L  F  +    G+AG    ++
Sbjct: 223 AAFVTWWLLNRTMMGRGVYAMGGSLAIAERLGYNLRAIHLFVFGYTGMLAGIAGILHVSN 282

Query: 253 RDRISPDMFKFSENIIVISIVILGGM 278
               +P        + VI+ VILGG 
Sbjct: 283 NRLANPFDL-VGSELDVIAAVILGGA 307


>gi|281413189|ref|YP_003347268.1| inner-membrane translocator [Thermotoga naphthophila RKU-10]
 gi|281374292|gb|ADA67854.1| inner-membrane translocator [Thermotoga naphthophila RKU-10]
          Length = 306

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/317 (11%), Positives = 95/317 (29%), Gaps = 28/317 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
               + +  V   + L +      +   + ++  Q+ +  + A+G++IV+   G + L+ 
Sbjct: 9   RRYPVVVGFVALLVALSILSDRFLTISNLLNVLRQVSVQAIIAFGMTIVI-ISGGIDLSV 67

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
              +A  A     +  +  + + +L  +             +   K +   + +AT+ ++
Sbjct: 68  GSVFAFSAVVLASILKQGSIFLAMLAGLGVGALFGLFNGFVIAKAKLQPFIVTLATMAIA 127

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             F  +     PIT          R       V                       +  M
Sbjct: 128 RSFTLLYTNGMPITGFSDAFRFIGRGEIFSIPVP----------------------VFIM 165

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +       L +T +     +I  N++A       +   K+  + +S  +  ++     
Sbjct: 166 FGVFFLTWYLLSQTKLGLYAYSIGGNEEATRLSGVNVDRYKIIFYVISGVYSAVSAMILT 225

Query: 251 ASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A  +   P   +  E   + ++V     + GG  ++        I+  +      +N   
Sbjct: 226 ARLNSAQPIFGQGYELDAIAAVVLGGASLSGGKGTVFGTLFGALIMGIINNGLNLLNVSP 285

Query: 306 FNSLLKFDCSFNMRHTT 322
           F                
Sbjct: 286 FYQQAVKGSIILAAVLL 302


>gi|145590695|ref|YP_001152697.1| inner-membrane translocator [Pyrobaculum arsenaticum DSM 13514]
 gi|145282463|gb|ABP50045.1| inner-membrane translocator [Pyrobaculum arsenaticum DSM 13514]
          Length = 290

 Score = 54.1 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 49/305 (16%), Positives = 96/305 (31%), Gaps = 20/305 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y  +  I   IY +   GLS++ G L + ++       IGAY          +  +   
Sbjct: 5   PYFLTGIIIGSIYGLTTLGLSLIFGVLRVANVAHGAFIMIGAYVAYTAFVALAIPPFASS 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++  I  A G ++    +K  G                 L     +    A +    RL
Sbjct: 65  LLAFAIGIAAGYLVYAGVIKRLGKA--------------ELNILVALFALGALLAEVARL 110

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
            +    V           + +  E+      +    ++ ++ L LRRT    A R +  +
Sbjct: 111 IWGPDFVGYKWTIGSVEIAGLQIELTKLIGAVLALLITIALELVLRRTYFGRAVRAVVQD 170

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                 +   +      + A+  A   + G F                  +I   I ++G
Sbjct: 171 PVGAMVVGVNVDRVFAFSSALGIAITTLGGVFLTLFIPVGINPYMGGPYTLIGFVIAVMG 230

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S++    A  +      +       ++   L      +     L  + L L++L+R 
Sbjct: 231 GLGSVAGAYVAGLLFGVFESV------GFYFFSLAGFAEPSQMALFLAFVMLLLILLLRP 284

Query: 337 HSLLR 341
             L R
Sbjct: 285 TGLFR 289


>gi|197295283|ref|YP_002153824.1| putative transport system protein [Burkholderia cenocepacia J2315]
 gi|195944762|emb|CAR57367.1| putative transport system component [Burkholderia cenocepacia
           J2315]
          Length = 344

 Score = 54.1 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 86/302 (28%), Gaps = 12/302 (3%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            A  +   + S+   + I  +   G+++ +   G   L+     A    +   +   +  
Sbjct: 43  PAFLNVDNLFSILQAVSIVALLGVGVTVTLA-AGGFDLSVGSVAATAQMAASYVLVVWHG 101

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S    +    ++    G+  GL   + R     +ATL    +   + +      +   G 
Sbjct: 102 SALAAVIACVVLGVTAGLFNGLLITRLR-VPDQLATLGTLFLLAGLQLIPTGGRSLATGS 160

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            + D      T    +          +     +   +L +  ++    + +  T      
Sbjct: 161 VLPDG-----TDATGVFPDAFLALGRLRVFDVVPLPVLVLAAVTVLACVTMEATRWGRVI 215

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR----DRISPDMFKFSEN 266
             I  N+ A           +++A+ VS A   + G   AA            +   +  
Sbjct: 216 YAIGGNETAARLAGAPAARYRVAAYVVSGAIASLGGVLIAARVGRGDVSAGHSLLLDAVA 275

Query: 267 IIVISIVILGGMT-SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
             +I   + G    ++         +  ++     +N  Y+           +       
Sbjct: 276 AALIGYAVWGAKRPNVFGTVVGAVFVGVLLNGLTMLNAPYYMQDFIKGVLLVLALAFTFG 335

Query: 326 IA 327
           I 
Sbjct: 336 IG 337


>gi|303239450|ref|ZP_07325977.1| inner-membrane translocator [Acetivibrio cellulolyticus CD2]
 gi|302593013|gb|EFL62734.1| inner-membrane translocator [Acetivibrio cellulolyticus CD2]
          Length = 295

 Score = 54.1 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 79/286 (27%), Gaps = 12/286 (4%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
            + +   G      ++ + GL+I+ G +G+++        IGAY    L          +
Sbjct: 4   SQILYQFGNSFSFLIIASMGLAIIYGMMGIINFAHGEFLMIGAYMTTALAQSGIPLPLAI 63

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
           +  S +      ++  L   K     L             +      +   +    +   
Sbjct: 64  LAASIITGLIGFILDRLIISKLYARPLDSV----------VATWGVSMVIKQGMALLMTS 113

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                             S+   + ++   ++L    L   + +    T      R    
Sbjct: 114 FTGNLALSGVSTPLGSIKSANGSFSVYRLLLMLIALLLIVIVYVVFIYTKFGLQSRATMQ 173

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
                 SL           F + S   G+AG  FA +          F         V++
Sbjct: 174 RSDIAASLGVNTNKIYGMTFMIGSMLAGLAGGLFAPTMSITPEFGSTFLMPS--FITVLM 231

Query: 276 GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
           GG   L     +   L  V  +   ++  ++ +++    +      
Sbjct: 232 GGANPLIGTLASAIGLGTVDSVVTILSTAFYGTMVMLIIAIIFIRV 277


>gi|270262724|ref|ZP_06190995.1| transporter [Serratia odorifera 4Rx13]
 gi|270043408|gb|EFA16501.1| transporter [Serratia odorifera 4Rx13]
          Length = 331

 Score = 54.1 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/321 (12%), Positives = 92/321 (28%), Gaps = 20/321 (6%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y   + L  V    L  L          I ++   I I  + A G+SI +   G   L+ 
Sbjct: 22  YKWGMLLTVVALIALFGLASDNFLDPNNIINILRSIAIVTVIAIGVSISLSVGG-FDLSV 80

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               ++              ++ + + V         +++ L      G + A   +++ 
Sbjct: 81  GSTASLA------------NALVVSLFVWYGFGTTGAIVLTLLICTLVGLFNAFLIVVLK 128

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                  +    +  G A  Y           + +                 +  ++L M
Sbjct: 129 IPDMLATLASLFVIQGVAMTYSYGGSITQNMLLPNGDMAEGLIPDIFSALGQVPVIVLIM 188

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++  + L+L  T        I  N +A        +  K++A+ +SS    + G   A
Sbjct: 189 LAVTIVVQLFLSLTKHGRRMYAIGGNPEAARLSGIRTVRYKVAAYVISSLLASLGGILLA 248

Query: 251 ASRDRISPDMFKFSENIIVISIVILG------GMTSLSKIAKATAILIGVVELCCGMNFY 304
           +     S         +  ++   +G      G  +         IL  +      ++  
Sbjct: 249 SRIGS-SQVNAGGGYLMDAVAAAYIGFSLAGSGKPNALGTLVGAVILGVLQNGLVMLSVP 307

Query: 305 YFNSLLKFDCSFNMRHTTLMV 325
           Y+   +       +      +
Sbjct: 308 YYAMDIIKGLVLALALAITYI 328


>gi|254250446|ref|ZP_04943765.1| Branched-chain amino acid ABC-type transport system, permease
           component [Burkholderia cenocepacia PC184]
 gi|124879580|gb|EAY66936.1| Branched-chain amino acid ABC-type transport system, permease
           component [Burkholderia cenocepacia PC184]
          Length = 286

 Score = 54.1 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 50/304 (16%), Positives = 104/304 (34%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++Y + A GLSIV G L  ++      Y +GAY       ++  + W+ + +
Sbjct: 8   IVNGIGVGMLYFLLAVGLSIVFGLLRFVNFAHGAFYLLGAYLCY-QALQWSANFWVALAI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ GA   I+    L+          ++ +     +L +   +  G  G  V      
Sbjct: 67  VPLVVGAFAWIVEKLVLRHVYAQQHEFHILATVGLALVLQECAILAWGPLGDNVPPPDAL 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  +              +Y  +  +V+     L+A +   L  T + +  R   ++ +
Sbjct: 127 NGVVI----------WGGFVYPKYRLFVIGFTAVLAALLWWVLEGTRLGSTVRAGSESTE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       FA+ +A   +AG   A  R        +      V+ +V    M
Sbjct: 177 MVSLLGINVTRVFSLVFALGAATAALAGVLAAPIRGVDPFMGIEALGVAFVVVVVGG--M 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +         ++  V  L   +              +      ++ +A+  V+L+R + 
Sbjct: 235 GNFLGALVGGLLVGIVQSLMSTL--------------WPEGARLMIYVAMAAVLLLRPNG 280

Query: 339 LLRL 342
           LL  
Sbjct: 281 LLGR 284


>gi|22127737|ref|NP_671160.1| sugar transport system permease [Yersinia pestis KIM 10]
 gi|45443075|ref|NP_994614.1| sugar transport system permease [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51598096|ref|YP_072287.1| ABC ribose transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|108809782|ref|YP_653698.1| sugar transport system permease [Yersinia pestis Antiqua]
 gi|108813772|ref|YP_649539.1| sugar transport system permease protein [Yersinia pestis Nepal516]
 gi|145600581|ref|YP_001164657.1| sugar transport system permease protein [Yersinia pestis Pestoides
           F]
 gi|150261080|ref|ZP_01917808.1| sugar transport system permease protein [Yersinia pestis CA88-4125]
 gi|153946911|ref|YP_001402975.1| ribose ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|162420658|ref|YP_001608381.1| sugar transport system permease [Yersinia pestis Angola]
 gi|165926956|ref|ZP_02222788.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165936895|ref|ZP_02225461.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166009682|ref|ZP_02230580.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166213492|ref|ZP_02239527.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167400716|ref|ZP_02306225.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167420834|ref|ZP_02312587.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167426513|ref|ZP_02318266.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167468070|ref|ZP_02332774.1| ribose ABC transporter, permease protein [Yersinia pestis FV-1]
 gi|170022387|ref|YP_001718892.1| monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|186897299|ref|YP_001874411.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
 gi|218930959|ref|YP_002348834.1| sugar transport system permease [Yersinia pestis CO92]
 gi|229836458|ref|ZP_04456625.1| sugar transport system permease protein [Yersinia pestis Pestoides
           A]
 gi|229839662|ref|ZP_04459821.1| sugar transport system permease protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229841745|ref|ZP_04461901.1| sugar transport system permease protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229904283|ref|ZP_04519394.1| sugar transport system permease protein [Yersinia pestis Nepal516]
 gi|270488110|ref|ZP_06205184.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
 gi|294504311|ref|YP_003568373.1| sugar transport system permease protein [Yersinia pestis Z176003]
 gi|21960860|gb|AAM87411.1|AE013990_9 D-ribose high-affinity transport protein [Yersinia pestis KIM 10]
 gi|45437942|gb|AAS63491.1| sugar transport system permease protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51591378|emb|CAH23044.1| ABC ribose transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|108777420|gb|ABG19939.1| sugar transport system permease protein [Yersinia pestis Nepal516]
 gi|108781695|gb|ABG15753.1| sugar transport system permease protein [Yersinia pestis Antiqua]
 gi|115349570|emb|CAL22544.1| sugar transport system permease protein [Yersinia pestis CO92]
 gi|145212277|gb|ABP41684.1| sugar transport system permease protein [Yersinia pestis Pestoides
           F]
 gi|149290488|gb|EDM40565.1| sugar transport system permease protein [Yersinia pestis CA88-4125]
 gi|152958406|gb|ABS45867.1| ribose ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|162353473|gb|ABX87421.1| ribose ABC transporter, permease protein [Yersinia pestis Angola]
 gi|165915137|gb|EDR33748.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165921062|gb|EDR38286.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165991604|gb|EDR43905.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166205433|gb|EDR49913.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166960963|gb|EDR56984.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167050084|gb|EDR61492.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167054501|gb|EDR64309.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169748921|gb|ACA66439.1| Monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|186700325|gb|ACC90954.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
 gi|229678401|gb|EEO74506.1| sugar transport system permease protein [Yersinia pestis Nepal516]
 gi|229691084|gb|EEO83137.1| sugar transport system permease protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696028|gb|EEO86075.1| sugar transport system permease protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229706526|gb|EEO92533.1| sugar transport system permease protein [Yersinia pestis Pestoides
           A]
 gi|262363668|gb|ACY60389.1| sugar transport system permease protein [Yersinia pestis D106004]
 gi|262367599|gb|ACY64156.1| sugar transport system permease protein [Yersinia pestis D182038]
 gi|270336614|gb|EFA47391.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
 gi|294354770|gb|ADE65111.1| sugar transport system permease protein [Yersinia pestis Z176003]
 gi|320017290|gb|ADW00862.1| sugar transport system permease protein [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 330

 Score = 54.1 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 97/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + V+   +         ++  + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 30  ILPILVLIVAVFGFLAPNFFTESNLLNIARQSSINIVLAAGMTFII-LTGGIDLSVGSIL 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A    +  S       L IP + ++    G+  G+           +     + +  
Sbjct: 89  GTTA-VTAMAVSLMPGWEGLSIPAALLMGTGLGLFNGMLVAWAGLPPFIVTLGTYTALRG 147

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +     T   + I                     F      Y   + ++++    + 
Sbjct: 148 VAYLLADGTTIINSNIN--------------------FEWIGNAYLGPVPWLVVIALLVV 187

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 188 AVCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWMVLLFVYGMSGLLSGLGGVMSASRLY 247

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 248 SANGNLGMGYELDAIAAVILGGTSFVGGVGTITGTLVGALIIATLNNGMTLMGVSYFWQL 307

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 308 VIKGAVIIIAVLI 320


>gi|319652082|ref|ZP_08006202.1| hypothetical protein HMPREF1013_02814 [Bacillus sp. 2_A_57_CT2]
 gi|317396230|gb|EFV76948.1| hypothetical protein HMPREF1013_02814 [Bacillus sp. 2_A_57_CT2]
          Length = 294

 Score = 54.1 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 102/306 (33%), Gaps = 23/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A G  ++  S   ++        IG Y  + L + Y +     + +
Sbjct: 8   LVTGIVVGSVYALVALGFVLIYKSSDAINFAQGEFLLIGTYVCLTLITAYNIPFIAALLI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + M S   G ++    L+       I+ ++ +    ++L     I  G            
Sbjct: 68  ALMFSAVLGFVIERIVLRPFIGEPVISMIMATIGLSSVLAGIVHIIWG-----------H 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +          ++      + LL +  +     L+ + + +  A R   D+Q+
Sbjct: 117 ETRVFPKIFSEQPVNLGEIVIAPVYLWSLLIVVAMLIIFTLFFKYSKLGIAMRATADDQQ 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+  ++      A+A+++    + G            +    +  + V+ + ILGG+
Sbjct: 177 AAMSMGISVKMIFAVAWAIAAIVSAVGGILLGNIN---GVNASLSAIGLKVLPVAILGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +  L  G         L            +  + L  +++ + + 
Sbjct: 234 DSIPGAIIGGLIIGILESLTGGYLDPLVGGGL---------KEVMPFVILVFILMFKPYG 284

Query: 339 LLRLRT 344
           L   + 
Sbjct: 285 LFGKKE 290


>gi|227486031|ref|ZP_03916347.1| galactoside ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus lactolyticus ATCC 51172]
 gi|227236076|gb|EEI86091.1| galactoside ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus lactolyticus ATCC 51172]
          Length = 347

 Score = 54.1 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/282 (11%), Positives = 79/282 (28%), Gaps = 16/282 (5%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI------LG 85
              + K I ++  Q    +  A G   ++   G   L+        A             
Sbjct: 42  FITNPKNILNILSQTSTRLFIALGTGGLLILAG-TDLSAGRIVGFTAAIAGALLQSPGFA 100

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
            ++  +I     +  +++      +      F   YL +   I S   Q  +     +  
Sbjct: 101 QKFFPNIQNPSIIVGLLAAIAIGSICGAINGFGVAYLKLHAFISSLGVQLAIFGILQLFI 160

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                        +G          R        E+   Y+++     S ++     +T 
Sbjct: 161 AAN----PFGPQPIGGFDERYANLVRGGFHIPGTELQFPYLIIYAAIASVAMWFIWNKTV 216

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +      +  N +A       +    +  F +S    G++G         ++       +
Sbjct: 217 LGKNMFAVGGNPEAAEVSGINVTRTIMIVFIISGVMYGLSGFLEGPRLGSVTSTTGDAYD 276

Query: 266 NIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
              + + +I      GG+ ++  I   + IL  +      + 
Sbjct: 277 LDAIEACLIGGVSFSGGIGTIPGIVLGSIILQVINYGLLYIG 318


>gi|51981296|emb|CAF60514.1| putative sugar ABC-transproter transport permease [Streptomyces
           kanamyceticus]
 gi|85813946|emb|CAF31569.1| putative sugar ABC transporter [Streptomyces kanamyceticus]
 gi|108743494|dbj|BAE95597.1| putative sugar transport permease [Streptomyces kanamyceticus]
          Length = 413

 Score = 54.1 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/348 (11%), Positives = 95/348 (27%), Gaps = 55/348 (15%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +   +L  LA +  L      G       + ++  Q    ++ A G+ IV+   G + L
Sbjct: 37  TRQYGMLIALAFLVVLFQIWTDGTLLLPNNVSNLIQQNGYILILAIGMMIVI-IAGHIDL 95

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI--AT 126
           +     A       ++  ++ +   L + +S +I    G   G            +  A 
Sbjct: 96  SVGSLVAFVGAMSAVMMVKHDMPWVLALVLSLLIGAVAGAWQGFFIAYVGIPSFIVTLAG 155

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF---- 182
           +++      I+++ + +     G     + +       +           +   +     
Sbjct: 156 MLLFRGLTQIVLEGQSLAPFPDGFQNIAKGFIPEMGPYTQYHNPTLVLGLLAVALLLLRE 215

Query: 183 -------------------------------------------MYYVLLGMCFLSASIIL 199
                                                      +  V+L MC L  ++  
Sbjct: 216 RRARKRQLAYELDVLPTGLWAAKCVAMTAAVVAFTLTLASFHGVPVVMLIMCGLLIALGY 275

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            +R   I      +  N+ A            L  F        +AG  +AA  +  +P 
Sbjct: 276 VMRNAVIGRHVYALGGNKAAAKLSGVKDKRVTLLVFVNMGVLAALAGCVYAARLNAGTPQ 335

Query: 260 MFKFSENIIVIS-----IVILGGMTSLSKIAKATAILIGVVELCCGMN 302
                E   + +       + GG+ ++        +L  +      + 
Sbjct: 336 AGLNFELEAIAASFIGGASMSGGVGTVLGAVIGGLVLGVLNNGMSLVG 383


>gi|27367695|ref|NP_763222.1| beta-methylgalactoside transporter inner membrane component [Vibrio
           vulnificus CMCP6]
 gi|37675821|ref|NP_936217.1| beta-methylgalactoside transporter inner membrane component [Vibrio
           vulnificus YJ016]
 gi|320157980|ref|YP_004190358.1| galactose/methyl galactoside ABC transport system permease MglC
           [Vibrio vulnificus MO6-24/O]
 gi|27359267|gb|AAO08212.1| Galactose/methyl galactoside ABC transport system, permease protein
           MglC [Vibrio vulnificus CMCP6]
 gi|37200360|dbj|BAC96187.1| galactoside ABC transporter, permease protein [Vibrio vulnificus
           YJ016]
 gi|319933292|gb|ADV88155.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio vulnificus MO6-24/O]
          Length = 335

 Score = 54.1 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/326 (10%), Positives = 94/326 (28%), Gaps = 13/326 (3%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F+L+  K   I  +L ++  +++     +  S + + ++  Q  + V+ A G++ ++ + 
Sbjct: 7   FALKHLKESAIYAVLLILLAVIVIQ-EPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQ 65

Query: 64  GLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           G   L+      + A      +        ++  I    +++    + +    +      
Sbjct: 66  G-TDLSAGRQVGLAAVISATLLQSIDNVNKVFPGIGEVPIVAVIICVCLIGAIIGLVNGV 124

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           +     +   I     +      N      V            +             +  
Sbjct: 125 IVAYLKVTPFIATLGTMIIVYGINSLYYDAVGASPIAGFDERFTTFTQGFINLGGFRFSY 184

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +Y ++ + F+         +T        +  N +A       +    L  +A+S   
Sbjct: 185 ITFYAIIAIVFMWVL----WNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVL 240

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
               G   A      + ++    E   + + V+      GG+ S++ +     I   +  
Sbjct: 241 YAFGGMLEAGRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINY 300

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               +    +   +            
Sbjct: 301 GMTYIGVSPYWQYIIKGSIIVFAVAL 326


>gi|327189517|gb|EGE56672.1| branched chain amino acid ABC transporter permease [Rhizobium etli
           CNPAF512]
          Length = 295

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 48/316 (15%), Positives = 104/316 (32%), Gaps = 26/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    I    Y + + GL+I+ G L +++      Y +GA+   +L +
Sbjct: 4   IFGIPLQALLGQLLIGLINGSFYALLSLGLAIIFGLLRVINFAHGAQYMLGAFVAYLLLT 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+  W  + ++ +I G  G I+    L+   D   +  L+ +      +        G
Sbjct: 64  YAGIGYWPSLILAPVIVGFAGAIIERLFLRRLYDLDPLYGLLFTFGLALAVEGTFRYLYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G   A      G               F+   I+  +V++    +     L + +T +
Sbjct: 124 SSGQPYATPAALAG----------GANLGFMFLPIYRGWVVVVSLVICLGTWLLIEKTKL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N          +       +A+ +     AG   A         +   +  
Sbjct: 174 GAYLRAATENAVLVQVFGVNVPVLLTLTYALGAGLAAFAGVLAAPIYQV--SPLMGSNMI 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+        +L     L                  +      ++ +
Sbjct: 232 IVVFAVVVVGGMGSIMGAIITGYVLGIAEGLTKVF--------------YPEASNIVIFV 277

Query: 327 ALFLVILMRSHSLLRL 342
            + +V+L+R   L   
Sbjct: 278 IMAIVLLIRPAGLFGR 293


>gi|317046285|ref|YP_004113933.1| inner-membrane translocator [Pantoea sp. At-9b]
 gi|316947902|gb|ADU67377.1| inner-membrane translocator [Pantoea sp. At-9b]
          Length = 393

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 46/365 (12%), Positives = 98/365 (26%), Gaps = 47/365 (12%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F L   +   +L  + ++     +   GA  S + + ++  Q  I  + A G+  V+ S 
Sbjct: 22  FPLPNLQVLVMLGAIVLIALFFTWTTDGAWLSPRNVSNLLRQTAITGILAVGMVFVIISA 81

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
             + L+      +   +  I     G  + L I V+ ++    G   G      +     
Sbjct: 82  -EIDLSVGSMMGLLGGAAAIFDVWLGWPLPLTIAVTLVLGLLLGTWNGWWVAYRKVPSFI 140

Query: 124 IATLIMSEIFQNIL--------------------IKWKPITNGKAGIYVADRLYFLGTTV 163
           +    M      ++                               G             +
Sbjct: 141 VTLAGMLAFRGILVGITDGTTVAPTSPAMSQIGQSYLPGGVGFGFGFVGLALFILWQWRL 200

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI---------------------ILWLR 202
           R   +            +    +   +   +  +                     +    
Sbjct: 201 RLRRQQLGLSQPAAGGAVARQAITAVLVLGAIWLLNDYRGVPTPVLLLALLLLGGMFMAT 260

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           RTA       I  N  A       +   KL+ FA++   + +AG   ++     SP    
Sbjct: 261 RTAFGRRIYAIGGNLDAARLSGINVARTKLAVFAINGVMVAIAGLILSSRLGAGSPSAGN 320

Query: 263 FSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
            +E   + + VI      GG+ S++       I+  +      M+   F   +       
Sbjct: 321 IAELDAIAACVIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILL 380

Query: 318 MRHTT 322
           +    
Sbjct: 381 LAVWM 385


>gi|319426335|gb|ADV54409.1| arabinose-specific ABC-type transport system, permease component 1,
           AraW [Shewanella putrefaciens 200]
          Length = 372

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 95/307 (30%), Gaps = 24/307 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +  +  +     + A G+S+V+ + G + L+     AI       L     + +  ++  
Sbjct: 77  LIDILNRSAPVALLAIGMSLVIATSG-IDLSVGAVMAIAGAVCANLLLLPDIGLGTVVLA 135

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++    G I G          +    L+M        +  +                 
Sbjct: 136 GLVVGLLAGCINGSLVSFLGIQPIVATLLLMVAGRGVAQLINQG---------------- 179

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                    +   F +  V   + +   +  +  +     L LR+TA+      +  N K
Sbjct: 180 ----QIVTFQHQGFAAIGVGQFLGLPMPIWIVIGMLILTQLLLRKTALGLFIEAVGCNAK 235

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L       KL A+A++     +AG    A       +       +  I  V++GG 
Sbjct: 236 ASRYLGINDKSIKLFAYAIAGLCAALAGMISTADIQGSDANNAGLWLELDAILAVVIGGA 295

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH- 337
             L+    +  + I    +   +      S L    +  ++   ++ + L      R   
Sbjct: 296 A-LTGGRFSLFLSIIGALIIQTLATTIIVSGLPAKFNLLIKAIVILTVLLLQSEKFRRQL 354

Query: 338 -SLLRLR 343
             L +LR
Sbjct: 355 SGLFKLR 361


>gi|56696375|ref|YP_166732.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56678112|gb|AAV94778.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 282

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 93/293 (31%), Gaps = 16/293 (5%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
            S     ++  QI    + A GL+IV G L ++++       IGAY+ VI  S      W
Sbjct: 1   MSSVLFLNLAWQISTLALVALGLAIVFGKLRIMNMAHGEFVMIGAYAPVITSSLGLSGWW 60

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
            L      +     ++         G       L+ +     +L +   +  G+    V+
Sbjct: 61  QLPVCLLSVGLVAFVLERAIIRHLYGRMFDS--LLATWGIAILLRETVELIFGRGYQSVS 118

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             +                      Y  +   V++G+    A++  W  R+ ++   + +
Sbjct: 119 PPI------------GGTLRLFGADYPAYRIAVIVGIVLGFAALYWWSTRSRVAVRIKAM 166

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             N +   ++          AF       G+AG   A +       M      I     +
Sbjct: 167 VGNPELAEAVGIDTARLSAGAFVFGCCTAGLAGLVLAPTIRI--EPMMGLDYLIRSFFAL 224

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           ++GG+ SL  +     I+ G   +   +    +  L     S          I
Sbjct: 225 VVGGLGSLEGLGIGAGIIAGTQSVLGAVANQTYGYLAVLTLSILFLWVKPDGI 277


>gi|148261913|ref|YP_001236040.1| inner-membrane translocator [Acidiphilium cryptum JF-5]
 gi|326405417|ref|YP_004285499.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|146403594|gb|ABQ32121.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Acidiphilium cryptum JF-5]
 gi|325052279|dbj|BAJ82617.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 295

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 97/281 (34%), Gaps = 12/281 (4%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
           +L+ L   A      +    I    Y M + GL+I+ G L +++      + +GA+    
Sbjct: 1   MLMILGKPAPLLFGQLLLGIINGSFYAMLSLGLAIIFGLLNVINFAHGALFMVGAFVTWG 60

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
           L    G+  W  + ++ ++ GA G+ +    ++F      +  L+++     +L      
Sbjct: 61  LLHYLGIGYWPAMVLAPVMVGAFGLGLERTLIRFTYKLDILYGLLLTFGLALVLEGLFTN 120

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
             G +G+  +             I        F+   ++  +V++    +  ++   + +
Sbjct: 121 AYGSSGVSYSAP----------GILSGTLDLGFMYLPVYRGFVVVAAIVICVAVWFVIEK 170

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T++    R   +N     +    +       FA   A  G+AG   A             
Sbjct: 171 TSLGALLRAATENPSLVQAFGVNVPRVIALTFAAGVALAGLAGVLAAPLYSV--NPGMGT 228

Query: 264 SENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
                V ++V++GGM S+         L  +          
Sbjct: 229 DLINTVFAVVVIGGMGSIGGAILTGFGLGIIQGFTEVYYPA 269


>gi|299532981|ref|ZP_07046368.1| High-affinity branched-chain amino acidtransport system permease
           protein livH [Comamonas testosteroni S44]
 gi|298719205|gb|EFI60175.1| High-affinity branched-chain amino acidtransport system permease
           protein livH [Comamonas testosteroni S44]
          Length = 302

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 92/305 (30%), Gaps = 16/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   +Y + A G  ++  + G+ +          A +           + L   +   +
Sbjct: 5   LMVGTLYALIAIGFVLIFKASGVFNFAQGAMVLFSALAMARFSQWIPGWLGLEPGLVGNL 64

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT----NGKAGIYVADRLYF 158
                 +  +  + +  + LA+  L+  E    ++            G            
Sbjct: 65  LAIVVTLALMVGVAWVIERLALRHLVNQEPITLLMATLGIAYLLDGLGPMVFGSEVYKID 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G     +          V+  +   Y       L   + L+ ++T    A R + D+ +
Sbjct: 125 VGMPKDPVFIMDSLFQGGVMISLEDLYAACIAAILVICLSLFFQKTKTGRALRAVADDHQ 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +    +  ++V+     + G  + +               +  + +VILGG+
Sbjct: 185 AAQSIGIPLSRIWVIVWSVAGGVALVVGIIWGSKLGVQYSLS---LVALKALPVVILGGL 241

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TSL        I+    +L            ++   ++ +             +L+R   
Sbjct: 242 TSLPGAIIGGLIIGVGEKLSEVYIGPMVGGGIETWFAYGLA---------LCFLLVRPQG 292

Query: 339 LLRLR 343
           L   +
Sbjct: 293 LFGDK 297


>gi|209546203|ref|YP_002278093.1| branched-chain ABC transporter permease [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|209539060|gb|ACI58993.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 295

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 48/316 (15%), Positives = 104/316 (32%), Gaps = 26/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    I    Y + + GL+I+ G L +++      Y +GA+   +L +
Sbjct: 4   IFGIPLQALLGQLLIGLINGSFYALLSLGLAIIFGLLRVINFAHGAQYMLGAFVAYLLLT 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+  W  + ++ +I G  G I+    L+   D   +  L+ +      +        G
Sbjct: 64  YAGIGYWPSLILAPVIVGLGGAIIERLFLRRLYDLDPLYGLLFTFGLALAVEGTFRYLYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G   A      G               F+   I+  +V++    +     L + +T +
Sbjct: 124 SSGQPYATPAALAG----------GANLGFMFLPIYRGWVVVVSLVVCLGTWLLIEKTKL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N          +       +A+ +     AG   A         +   +  
Sbjct: 174 GAYLRAATENAVLVQVFGVNVPVLLTLTYALGAGLAAFAGVLAAPIYQV--SPLMGSNMI 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+        +L     L                  +      ++ +
Sbjct: 232 IVVFAVVVVGGMGSIMGAIITGYVLGIAEGLTKVF--------------YPEASNIVIFV 277

Query: 327 ALFLVILMRSHSLLRL 342
            + +V+L+R   L   
Sbjct: 278 IMAIVLLIRPAGLFGR 293


>gi|126738257|ref|ZP_01753978.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
 gi|126720754|gb|EBA17459.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
          Length = 331

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/334 (11%), Positives = 102/334 (30%), Gaps = 34/334 (10%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--------- 82
              + +   +  +  ++Y + A G  ++  + G+ +    +     A + V         
Sbjct: 5   FLFATEVFINGLMAGVLYALVALGFVLIYKASGIFNYAQGVMALFAAMTLVGIMEGQVPF 64

Query: 83  -----------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                      +    + +   L I ++  +      ++    ++       I   + + 
Sbjct: 65  SHIINAIFGTEVHHFGWHVPALLAILLTVGVMVGFAWLVQRVVMRHLVGQEPIILFMATI 124

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                L     +  G     +   L   G+     +  F    +F  + I    ++    
Sbjct: 125 GLAYFLEGVSDLMWGSEIKTLDVGLPQGGSFWIEDMTSFLGSDNFYGFFIDQLDIVATFV 184

Query: 192 FLSAS--IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
            +     ++L+ + T    A R + D+ +A  S+  ++ F  +  ++V+     +AG  +
Sbjct: 185 AILLVTGLVLFSQYTKQGRAMRAVADDHQAALSVGISLNFIWVLVWSVAGFVALVAGIMW 244

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                            +  + +++LGG TS+        I+    +L            
Sbjct: 245 GTKSGVQFSLS---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFAIGPMVGGA 301

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            +   +          +   L ++ R   L   +
Sbjct: 302 TENWFA---------YVLALLFLVFRPQGLFGEK 326


>gi|300310286|ref|YP_003774378.1| branched-chain amino acid ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300073071|gb|ADJ62470.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 298

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 93/305 (30%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+L+          A ++V L  R    +  L+  
Sbjct: 13  LTGGLLSGVMYALVAIGFVLIYKTSGVLNFAQGAQLLFAALTFVSLVERGIPFVLALLLT 72

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A +      I  +     +        +    +   I    + +               
Sbjct: 73  LAAMILLGLAIERVVLRPLQNQSPMSLFMATLGLSYVIEGAAQLLWG------------T 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F  +       + A + L+ R T +   +R + D+  
Sbjct: 121 QVHALELGIADTPLQLGGMMISSFDLFAAATAALMVALLSLFFRYTRLGLEFRALADDGF 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +     + +A +     +AG  + A               +  + +++LGG 
Sbjct: 181 AALAVGLRLPRILAAVWATAGLIALIAGLLWGARLGVQFSLS---LVVLKALPVLVLGGF 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++  + +L          S ++   +          +A    +L+R   
Sbjct: 238 DSVLGAIVGGLLIGALEKLAEVYLGPLVGSGIEGWFA---------YVAALAFLLVRPSG 288

Query: 339 LLRLR 343
           L   R
Sbjct: 289 LFGQR 293


>gi|291298183|ref|YP_003509461.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728]
 gi|290567403|gb|ADD40368.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728]
          Length = 350

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/320 (10%), Positives = 94/320 (29%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +    + A+    + +      ++     ++  +     + A  +++++   G   
Sbjct: 28  LTRPEFGSLVGAIAVFAVFYALAPTFRNASSWSTILYETSTIGIMAVAVALLM-IGGEFD 86

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +     A    I   +  +++W+ +  S     A G + G   ++ +     + TL
Sbjct: 87  LSAGVGVIATALFGAIFTYQLSVNVWVGVFASLAFGLAVGFVNGWLLVRTKLPSF-LVTL 145

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               + Q + +    +  G         +             F      +   +  + + 
Sbjct: 146 STFLMLQGLNVALTKLITGSTASDRISDMDGFAAAEAVFASEFSLFGVDIQITVLWWLLF 205

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +G+            RT + N       +  +  ++   +   K+  F V  A    +G 
Sbjct: 206 VGLATWVLL------RTRVGNWIYASGGDADSARAVGVPVNRVKIGLFMVMGAAAWFSGM 259

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
                 + +       +E + +++ VI      GG  +    A    I     +      
Sbjct: 260 HLLFEYNTVQSGEGIGNELLYIMAAVIGGCLLTGGYGTAVGAAIGALIYGMTKQGIVYAG 319

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
           +     +        +    
Sbjct: 320 WDDNWLMFFVGAMLLLATVI 339


>gi|304392022|ref|ZP_07373964.1| inner-membrane translocator [Ahrensia sp. R2A130]
 gi|303296251|gb|EFL90609.1| inner-membrane translocator [Ahrensia sp. R2A130]
          Length = 336

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/334 (9%), Positives = 88/334 (26%), Gaps = 19/334 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
           FL      +               + A G++++   L   +       A G    ++L  
Sbjct: 3   FLNAIVLFANFVFVPGLAYGAQLALGALGITLLYSILRFANFAHGDTMAFGTMVTILLTW 62

Query: 87  RYGLSIW---------LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
            +              L +P     +    ++      K      A+   ++      + 
Sbjct: 63  WFQSLGISFGPLPTALLALPFGVAATAGFALLTDKLVYKHYRQVKAVPIRMVMASVGVMF 122

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +    +         +              +     +  +  +      ++    L A++
Sbjct: 123 VMNGVVRFIIGPNDQSFFDGERFIIKAREFKKMTGLNEGLAIKSSQALTVVVAIILVAAL 182

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
             +L RT    + R   DN+        +        + +++    +AG  +   +    
Sbjct: 183 FWFLNRTRTGKSMRAFSDNEDLALLSGISPDKVVAVTWILAAGLATIAGVLYGLDKSF-- 240

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE--------LCCGMNFYYFNSL 309
                F   + + +  ++GG+           ++                 +    +   
Sbjct: 241 KPFTYFQLLLPMFAAAVVGGVGQPVGAILGGFVVAFSEVTVTYAYKKFITYLVPESWAPD 300

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                        +  I L +V+L+R   LL+ +
Sbjct: 301 GLMQLLSTDYKFAVSFIILVVVLLVRPTGLLKGK 334


>gi|265986278|ref|ZP_06098835.1| bacterial inner-membrane translocator:Sodium:dicarboxylate
           symporter [Brucella pinnipedialis M292/94/1]
 gi|264658475|gb|EEZ28736.1| bacterial inner-membrane translocator:Sodium:dicarboxylate
           symporter [Brucella pinnipedialis M292/94/1]
          Length = 230

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 55/188 (29%), Gaps = 5/188 (2%)

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W+ +       +   R +   +     +    F          +   +L +  L+    +
Sbjct: 35  WRSLLRAWRSAFDDQRSHLQQSRRSPELGNTGFDWLGFNKLFGVPIGVLVLAILAIICAI 94

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L RTA          N++A       +   K+S + +S     +AG   ++      P 
Sbjct: 95  VLNRTAFGRWLYASGGNERAAELSGVPVKRVKVSVYVISGICAAIAGLVLSSQLTSAGPT 154

Query: 260 MFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                E   + ++VI      GG  ++        ++  + +    +    +   +    
Sbjct: 155 ADTTYELTAIAAVVIGGAALTGGRGTIQGTLLGAFVIGFLSDGLVIIGVSSYWQTVFTGA 214

Query: 315 SFNMRHTT 322
              +    
Sbjct: 215 VIVLAVLL 222


>gi|260906882|ref|ZP_05915204.1| monosaccharide ABC transporter membrane protein [Brevibacterium
           linens BL2]
          Length = 364

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/316 (12%), Positives = 89/316 (28%), Gaps = 29/316 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + ++  +L+        S   I  +   + +    A G ++V+     L L+     
Sbjct: 18  LVGVLIIGAVLVATTGRNFFSPGNIRDILTGMSVLGFVAIGQTLVI-LGASLDLSVPYVM 76

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           ++ +       +     +   + ++ +++   G+  GL    F          +   +  
Sbjct: 77  SLASLIAAQTMNGSDAMVLPAVLLTLVVTACIGLANGLIVTVFGVHGFVATLGVGLMLKG 136

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +   ++                            + F          +    + M  L+
Sbjct: 137 YLDTNYQGTEGSV---------------------PWSFQLFGATGVGPVPISTIVMLALA 175

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L RT+  +    +  N +             + A   SS F G+AG   A+   
Sbjct: 176 GLVAFILVRTSFGHHLFAVGGNSEVARLSGVRQRLPLIGAHIGSSVFAGLAGLLLASRLG 235

Query: 255 RISPDMFKFSENIIVISIVIL-------GGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             SP +       ++    ++       GG  S+       AI   +  L   M F  F 
Sbjct: 236 VGSPTVGSQGSYDLLSIAAVVLGGTVLMGGRGSIWGTIGGVAIFAVLDNLMSVMQFNPFL 295

Query: 308 SLLKFDCSFNMRHTTL 323
             +       +     
Sbjct: 296 KDVIRGLVIIIAVALY 311


>gi|323946472|gb|EGB42498.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H120]
          Length = 327

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 81/262 (30%), Gaps = 21/262 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               ++  L          + + I ++ +Q  +  + A G++ V+ + G + L+     A
Sbjct: 28  LFSLIILVLFFSFSSPFFFNTENIMTIALQTSVIGIMAIGVTFVIITAG-IDLSLGSVVA 86

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
               +  I  +        +  ++ +++G     +    +        IATL +    + 
Sbjct: 87  FSGVAVGICATLGL--PLPVCIIAGVLAGGLCGYVNGLLVTKMTIPPFIATLGLMMSVR- 143

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                     G   +    R  +                  + Y +F   ++        
Sbjct: 144 ----------GINMVMTDGRAIYFADYPMFKTLAQGRLFDVLPYPVFYLVIVA------L 187

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L++T I      +  N+ A       +   K+  +A      G+AG   A+  + 
Sbjct: 188 VGAYILKKTVIGRYVYAVGSNEVAAHLSGIKVQRVKIFVYAFCGLLTGIAGVILASRLNS 247

Query: 256 ISPDMFKFSENIIVISIVILGG 277
                      +  I+ V++GG
Sbjct: 248 -GQPTVGVGYELEAIAAVVIGG 268


>gi|167758666|ref|ZP_02430793.1| hypothetical protein CLOSCI_01007 [Clostridium scindens ATCC 35704]
 gi|167663862|gb|EDS07992.1| hypothetical protein CLOSCI_01007 [Clostridium scindens ATCC 35704]
          Length = 409

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/295 (11%), Positives = 88/295 (29%), Gaps = 8/295 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  +V  +++ +          +  +  Q    ++ A G+S  +   G   L+     
Sbjct: 88  IMIALLVMIIVIMIIQPRFMQLAVLLDILTQSSTKMIVALGISFTLLIAG-TDLSAGRMV 146

Query: 75  AIGAY--SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            + A   + ++  + Y    +  +P   +I      ++          +L     +   I
Sbjct: 147 GLAAVVSTSMLQTADYANRFFPNLPHMVLIVPIIIAVIACGLFGILNGFLVAKYDMHPFI 206

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
               +       N        ++   +G      +   +     +     +  ++     
Sbjct: 207 ATLAVQVMVYGANSLYFDMEPNKSQPIGGVRPDFVLLGQKKLLAIGDFPGISVLVPIAIC 266

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               +   L +T        I  N++A       +    +  F ++S   G+AG   AA 
Sbjct: 267 FVLLVWFILNKTVFGKNVYAIGGNREAAVVSGVNVFKTIMGIFILASVLYGVAGVLEAAR 326

Query: 253 RDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMN 302
               + +     E   + + V+      GG+  +S I     I   +      + 
Sbjct: 327 TAGATNNYGNGYELDAIAACVVGGVSLNGGVGKVSGIVSGVLIFTVIQYGLQFIA 381


>gi|332799751|ref|YP_004461250.1| ABC transporter integral membrane subunit [Tepidanaerobacter sp.
           Re1]
 gi|332697486|gb|AEE91943.1| ABC-type transporter, integral membrane subunit [Tepidanaerobacter
           sp. Re1]
          Length = 289

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 89/304 (29%), Gaps = 29/304 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                IY + A   ++V  S GLL+ +      I AY +            ++  + +++
Sbjct: 13  IAMGFIYALVAIEYTLVWNSTGLLNFSHDKFIMISAYLFAGTFILRMNMTPMMGVIMSLL 72

Query: 103 SGACG--MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
                  ++        R     I  ++ + +   IL +   I  G A   +   L    
Sbjct: 73  VMFIFGAVVAMTIFNPLRNMSSPIFAVMGTIVLGRILTELARIIWGPAPFSLPKFLSGKY 132

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                           VI      ++++    + A +  + + T    A R +  N+ A 
Sbjct: 133 K------------IGNVIIARANVWIIVVSLIIVAVMQFFFKATKAGKAMRCVSQNKMAA 180

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             +   +    +   A+S+      G       +  +             +  ++GG   
Sbjct: 181 SLMGIDVTKNIVLTIALSAMICTAIGILVIPLFNIDNTMANMIGLKG--FAAGVVGGFGY 238

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           L        I+  +  +   +    +   + F             + L   +L +   +L
Sbjct: 239 LPGAIVGGLIIGILENISVTVFPAVYKDCVAF-------------VLLIAFLLFKPTGVL 285

Query: 341 RLRT 344
             R 
Sbjct: 286 GNRK 289


>gi|328886414|emb|CCA59653.1| ABC transporter integral membrane protein [Streptomyces venezuelae
           ATCC 10712]
          Length = 333

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 91/295 (30%), Gaps = 25/295 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +L +LAV+  +          +   +  +  Q  +  +   G++ V+ + G + L+
Sbjct: 26  RNLSLLGVLAVLIAVGGLTRPAEFLATSNLQLVLTQASVIGVVTVGMTFVI-TSGGIDLS 84

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+   S            +  I  +A++ G    ++    + + G    IATL M
Sbjct: 85  VGAIVALA--SVWATTLATQEFGFAGILFTAVVVGLGCGLVNGVLVAYGGMVPFIATLAM 142

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
               + + ++                    G T    +           Y + +  ++L 
Sbjct: 143 LASARGLALQITD-----------------GKTQIVTVPSVLDLGVPDAYVLGVPPLVLV 185

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              ++A+  L L RT        +  N +A       +   +L  + +S    G+A    
Sbjct: 186 FAAVTAAGWLLLNRTTFGRRTIAVGGNPEAARLAGIDVRRQRLLLYLLSGLCCGIAAFLL 245

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
                          E   + + +I      GG  ++        +   +  +  
Sbjct: 246 VVLAGSGQNTNGNLYELDAIAAAIIGGTLLSGGRGTIVGSVLGVLVFTTITNIFA 300


>gi|323356626|ref|YP_004223022.1| branched-chain amino acid ABC transporter permease [Microbacterium
           testaceum StLB037]
 gi|323272997|dbj|BAJ73142.1| branched-chain amino acid ABC-type transport system, permease
           components [Microbacterium testaceum StLB037]
          Length = 284

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/282 (11%), Positives = 69/282 (24%), Gaps = 17/282 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S       + +   G+ +V     +L+         GA+                 
Sbjct: 6   TYLLSGLALAGSFALVGSGIVVVYRVTHVLNFAQGSFVVFGAFLS--------------- 50

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                +    G+      +      L +  + + +   + +               A   
Sbjct: 51  QTFRQLGLPPGLSELAAVVVVGLIGLVVGAVAIGKPGTHPMTSLLITLGMSLVAAAAIIA 110

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
            +    V                E      L        ++ L   RT I  A      N
Sbjct: 111 VWGQNPVSPAGIGGTVQLFGAEIETQRLVTLAVAVATLGAMSLLFTRTDIGRALTAAASN 170

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +A   +        L +F ++    G+AG   A                +  ++  + G
Sbjct: 171 PRAARLVGIDTRAMGLLSFTIAGVLGGLAGVLIAP--TTAVSVTSDLPFVLSALAAAVFG 228

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           G+ S         +L    +L  G     + + +       +
Sbjct: 229 GLRSPWMTFVGALVLGVTGQLVAGYANGSYQTQIALIMMLAI 270


>gi|322417903|ref|YP_004197126.1| inner-membrane translocator [Geobacter sp. M18]
 gi|320124290|gb|ADW11850.1| inner-membrane translocator [Geobacter sp. M18]
          Length = 294

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 91/307 (29%), Gaps = 19/307 (6%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
              + +    +   IY+  A   S+  G + ++          GA++   L    GL  +
Sbjct: 3   LLPQALTDGILLGGIYITIAIAFSLTYGVMHVIDFAVGEWIMFGAFTGYYLNKWTGLDPF 62

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + +PV  ++    G I+     +          L+       + I +K +     G Y  
Sbjct: 63  IFLPVIFVLYFGVGYIIQPVIHRVLSGTKGNPFLMGLVFTFGLAIMFKGLALTAFGYYSN 122

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                      +L  F    +   +  + + Y L      + ++   L++T      R +
Sbjct: 123 SIPSAFSEGSFNLEPFGLTVTIPTVRLVGLCYALAI----TLALHYLLKKTNFGLGVRAL 178

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             ++ A   +           + +      M G                    I    +V
Sbjct: 179 AQHKDAAGLMGVNSKRTGSYVYGIYVGISAMTGVLLGCILSI--GAQMGNEYTIFAFFVV 236

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +L GM  L+ +  A  +L  V  +                          + + L++++L
Sbjct: 237 VLAGMGYLAGVPWAALLLGLVQSIFMIYFN-------------PSHTLLAVFVILYVILL 283

Query: 334 MRSHSLL 340
           +    L 
Sbjct: 284 ISPRGLF 290


>gi|33598592|ref|NP_886235.1| branched-chain amino acid transport system permease protein
           [Bordetella parapertussis 12822]
 gi|33574721|emb|CAE39378.1| branched-chain amino acid transport system permease protein
           [Bordetella parapertussis]
          Length = 290

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 85/306 (27%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +         Y M A  +++V   + +++      + +GA+   +     GLS+WL  P+
Sbjct: 8   LIYGLSVGSTYAMIALAITLVFRGMDIINFAQGEIFMVGAFLGYVFHVDLGLSMWLAFPL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   +   G  +    ++   +   ++  +M+     +L     +  G +          
Sbjct: 68  AIASALVFGSFLERVFMRRLENSNQLSLFMMTVALFILLRSAAQLVFGSSAYRFPP---- 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +         V        V+     +   + L   RT +  + R +  ++ 
Sbjct: 124 --------LSEHAASIGSVRISDQYLIVIGMTLLIMLLLYLLFTRTPLGLSVRAVAQDKT 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +        A+ SA    AG  +A                            
Sbjct: 176 TARMMGINVSRINNFTVALCSALGAAAGIVYAPIAVLSFDMGNLIMLKGF---------- 225

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                 A     L  +     G                +     +    L L+IL++ + 
Sbjct: 226 -----TAALLGGLGLLSGAVLGGIMLGVIEQFGTLLINSAYKDLVSFSILLLIILVKPNG 280

Query: 339 LLRLRT 344
           +L  + 
Sbjct: 281 ILGKKQ 286


>gi|148257365|ref|YP_001241950.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. BTAi1]
 gi|146409538|gb|ABQ38044.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 291

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/307 (9%), Positives = 76/307 (24%), Gaps = 26/307 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A G +++  +   ++        + A+  + +          ++  
Sbjct: 8   IVAGLATGAIYALVAVGFTLLWQTSQTINFAQGEFVMLPAFLMLAVMHLGAPFWLAVLVG 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+ +   G+   +  +     +  +   I +      + +                   
Sbjct: 68  IALSALLLGLAFKMLLVDPMLRHGVLPLAIATMALAIGIKEVVKQFFSAEASP------- 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S++             +    VL         +   L RT++ +  +    N  
Sbjct: 121 ----FPSIVPVGDVSILGRAISLQSLGVLAVAILAVVGLTTLLNRTSLGHQMQAAAQNPT 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L  F +++  + +A          ++                I+GG 
Sbjct: 177 VARIIGVPVERMILLTFLINAVLVALASVLITP--IYLAKFSSGEVLGQAAFIAAIVGGF 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             +        ++  V  L        + + +       M                R   
Sbjct: 235 NQVRGAIAGGLLIGVVDNLAAAYVSTQYRAAVPMLLLILMIL-------------FRPQG 281

Query: 339 LLRLRTP 345
           LL     
Sbjct: 282 LLGRAEE 288


>gi|307298821|ref|ZP_07578623.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915246|gb|EFN45631.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 330

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 96/314 (30%), Gaps = 23/314 (7%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L +L V++  L     G   S   I ++  Q  I  + A G+++++   G + L+    
Sbjct: 15  LLIILVVMWVFLAIATGGNFSSWANITNLIRQSSINGVVAIGMTLII-ITGGIDLSVGSI 73

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             +    + I  S  G   +  I    +  G   +I  +              + + +  
Sbjct: 74  VGLSGMVFAIFTSTRGEFQFPTIVGILLALGISALIGLV------------NAVAVHDGK 121

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
               I    +     G+ +      + T V    R F       I  +   +++L    +
Sbjct: 122 VPAFIATLGMMTLVRGVVMYISSGRMVTAVPLEYRRFAVLEFLGIPALAWTWIILAGFMM 181

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
                   + T        I  N++A       I     S + V++ F  +AG       
Sbjct: 182 LVL-----KYTKFGRNLYAIGSNEEAARLSGINIRLNMYSFYIVAALFSAIAGLMLGTRM 236

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
               P      E   + S+VI      GG+ ++   A    I+  +      +    F  
Sbjct: 237 AAGVPTGGDGYELDAIASVVIGGASLSGGVGTVLGTALGALIIQTIRNGGNLLGVDPFIM 296

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 297 QIVIGAIIILAVFF 310


>gi|304395918|ref|ZP_07377800.1| inner-membrane translocator [Pantoea sp. aB]
 gi|304356287|gb|EFM20652.1| inner-membrane translocator [Pantoea sp. aB]
          Length = 323

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 92/322 (28%), Gaps = 27/322 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           L+ N  D    +  ++  +          +   + ++  Q  I  + A G+++V+   G 
Sbjct: 17  LKFNVRDAGTLIGLLIIVVTFSFLSPVFFTLPNLLNILQQSSINALIALGMTLVI-ISGG 75

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+ A     L +        ++    + +        L +           
Sbjct: 76  IDLSVGPTAALSAVLGATLMTLGVPVPLAILATLGVGAMCGLFSGSLIA----------- 124

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L  +     G +       +Y  G  V  +   FR   +  +  I    
Sbjct: 125 --------YAGLQPFIVTLGGLSLFRAIALIYTGGNPVFGIPLAFRSLINSTVLGIPTPI 176

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           V++ +      +   + +T +      I  N++A       +   K++ +  S     +A
Sbjct: 177 VIVAVIA--LLLWTVMNKTPLGEYILAIGGNEEAARVAGVPVKRTKVTVYIFSGLLASLA 234

Query: 246 GAFFAASRDRISPDMFKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
                       P +    E        +    ++GG  S+        IL  +      
Sbjct: 235 SLILIGRLGAAEPTIGNLWELDAIAAAAIGGASLMGGKGSIFGTLIGVVILGVLRNGLTL 294

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +N   F  LL       +    
Sbjct: 295 LNIQAFYQLLATGLIIIIAMLI 316


>gi|260462627|ref|ZP_05810833.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
 gi|259031533|gb|EEW32803.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
          Length = 327

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 44/317 (13%), Positives = 105/317 (33%), Gaps = 26/317 (8%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L ++  V  + + +      S+  I ++  Q  + ++ A G+++++     + L+   +
Sbjct: 25  VLGVILAVLCIAISIAAPQFYSEANIIAILRQCALVLIVASGMTMLI-ITAEVDLSVGAS 83

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            A       +       S+ L +  +   +G  G+  GL   + R + L           
Sbjct: 84  LAFVGCI-GMAVLNSTHSLTLGMLAALAFAGGVGLFNGLVVTRLRVNSLIATI------- 135

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
                       G   +       F    V++  +   F      Y       ++    +
Sbjct: 136 ------------GTMMMLQGGVYLFTREAVQNHNQLASFTDLGAGYVGAAPVPVILAALI 183

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
                + LR T +      +  N+KA           KL AF V+   +G+AG   ++  
Sbjct: 184 FVVAYVTLRFTTLGRYLYAVGANEKAVRLSGLRSERLKLFAFVVTGLCVGIAGMILSSLM 243

Query: 254 DRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +   P   +  E  ++ +++     +LGG  SL        +L  +      + +     
Sbjct: 244 NAGQPTAGRGFELTVIAAVILGGTSLLGGRGSLFGTLLGVLVLKVIDNGIIILGWNQDLQ 303

Query: 309 LLKFDCSFNMRHTTLMV 325
           ++       +     ++
Sbjct: 304 MVVPGVVIILATYLDII 320


>gi|253687732|ref|YP_003016922.1| inner-membrane translocator [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251754310|gb|ACT12386.1| inner-membrane translocator [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 343

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/314 (13%), Positives = 105/314 (33%), Gaps = 11/314 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  +          S++ I ++  ++ IY + A G++ V+ + G + L+     
Sbjct: 30  VFIFMILLLIFFQSQNSNFLSERNITNILTEVSIYGIMAVGMTFVILTAG-IDLSVGSIL 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +        G +   + P +         +    ++     +L    +    +  
Sbjct: 89  AVCAITAA--SVIKGDNFTTVDPDAWFGLSWLVALGICLAMGTFIGFLHGLGVTKLRLPP 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+        G         +   G  +      +R+     I  I +   +  +  L 
Sbjct: 147 FIVT-----LGGMTIWRGLTLVMNDGAPIAGFDPGYRWWGRGEILGISVPIWIFALVALL 201

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + L   +T        I  N +A       +    +S + V     G+AG   +A   
Sbjct: 202 GYLAL--HKTRWGRFVYAIGGNTEAARLAGVNVQRVLVSVYVVIGCLAGLAGFILSARLG 259

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                    +  + VI+ V++GG + +    + +  +IG + +   +N     ++  +  
Sbjct: 260 SAEAVA-GITFELRVIASVVIGGTSLMGGYGRISGTIIGSIIMGILINGLVLMNVSAYYQ 318

Query: 315 SFNMRHTTLMVIAL 328
                   ++ +A 
Sbjct: 319 QIITGLIIVLAVAF 332


>gi|227818358|ref|YP_002822329.1| ribose ABC transporter [Sinorhizobium fredii NGR234]
 gi|227337357|gb|ACP21576.1| putative ribose ABC transporter [Sinorhizobium fredii NGR234]
          Length = 352

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 95/312 (30%), Gaps = 24/312 (7%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY------A 75
             L ++       S   ID++     IY + A G+++V+   G + L+           A
Sbjct: 40  VGLAIYWIQPRFLSAYSIDNILRTASIYGIVALGMTLVI-ITGGIDLSAGSMMALGGALA 98

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
            G        +       ++  + A+   A   ++   ++   G    + TL M  + + 
Sbjct: 99  AGLLGTAFGAANPLSFPPMVAILIALAVAASIGMLNGLAISALGMAPFVVTLGMMTVVRG 158

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +   +   T G         +  L + + S        ++ +   + +   ++       
Sbjct: 159 LTFIFADFTVGSVPGSPITFMDSLFSWLGSGSFGPIPTAAALFLTLAVILSIVL------ 212

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                 R T    +   I  + +        +    +  +A+     G+ G   A     
Sbjct: 213 ------RFTPFGRSIYAIGGDAEIARLAGINVPLVIVGVYALMGMLAGLGGVVQAGRLSS 266

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           +SP M    E  I+  +V+      GG  ++     A  ++  +      MN   F   L
Sbjct: 267 VSPLMGVGYELDIITIVVVGGASLAGGRGTVFGTVLAAILISLIDNGLTMMNVPSFYQYL 326

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 327 VKGSVLLAAVIL 338


>gi|254488583|ref|ZP_05101788.1| inner-membrane translocator [Roseobacter sp. GAI101]
 gi|214045452|gb|EEB86090.1| inner-membrane translocator [Roseobacter sp. GAI101]
          Length = 329

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/323 (10%), Positives = 99/323 (30%), Gaps = 32/323 (9%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV------------------ 82
           +  +  ++Y + A G  ++  + G+ +    +     A +                    
Sbjct: 14  NGLMAGVLYALVALGFVLIYKASGIFNYAQGVMALFAALTLAGIMDGQVPFSHLINAVFG 73

Query: 83  --ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
             +    + +  +L I ++ ++  A    +     +       I   + +      L   
Sbjct: 74  TDVHHFGWNVPAFLAILLTMVVMIALAYAVQRLVFRHLVGQEPIILFMATIGLAYFLEGV 133

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
             +  G     +   L     T      F      F I  + +   ++    +   ++++
Sbjct: 134 GDLMWGSDIKSMDVGLPQGINTWIDETTFEALGYGFFIDNLDIVASIIAALLV-IGLVMF 192

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
            + T    A R + D+ +A  S+  ++ F  +  ++++     +AG  +           
Sbjct: 193 AQYTKQGRAMRAVADDHQAALSVGVSLNFIWILVWSLAGFVALVAGIMWGTKSGVQFSLS 252

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
                 +  + +++LGG TS+        I+    +L   +    F      +       
Sbjct: 253 ---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFLIGAPFLGGATENW------ 303

Query: 321 TTLMVIALFLVILMRSHSLLRLR 343
                +   + ++ R   L   +
Sbjct: 304 --FAYMLALIFLVFRPQGLFGEK 324


>gi|315428065|dbj|BAJ49652.1| branched-chain amino acid ABC transporter permease [Candidatus
           Caldiarchaeum subterraneum]
          Length = 312

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 83/284 (29%), Gaps = 14/284 (4%)

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           + + +     +IG  + + + S +    +L +  + ++ G   + + L  L+      A 
Sbjct: 34  VPNFSHGSFASIGMMTMLTMTSAFNQPAYLSLLPAFLLGGLAALALYLLVLRPLISRDAS 93

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
               M       LI    +         AD                +F            
Sbjct: 94  LVSQMIATIAFELILIAVL------NIYADYFTQTFKVQSRGFLIRKFDVRIFGEPGVFI 147

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
                       + L L +T      R   +N     +L   +  A   ++ ++    G+
Sbjct: 148 IAPALAVSTVIFLYLLLNKTRFGIGLRAAIENPSLAGTLGINVKRAYTFSWFLAGGLGGV 207

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG+  A          +     I + +  I+GG+ ++        +L  V  L       
Sbjct: 208 AGSLLA--LWFQGSPNYGSELLISIFAAAIVGGLQNIYGAVAGGYLLGFVEILGTRQLG- 264

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                L       +    + + A+ + +L     L+ LR    F
Sbjct: 265 -----LTLGPWITVYRPLIPITAMAITLLFLPQGLVSLRLRRVF 303


>gi|302537881|ref|ZP_07290223.1| conserved hypothetical protein [Streptomyces sp. C]
 gi|302446776|gb|EFL18592.1| conserved hypothetical protein [Streptomyces sp. C]
          Length = 346

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 71/212 (33%), Gaps = 15/212 (7%)

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
                 +     ++ A G ++ LP+L   G  LA+ATL ++ +   +L + + +  G AG
Sbjct: 7   WPFAAALAAGTCVAAALGALVALPALHLGGRSLALATLALAFLADQVLFQMRWLRGGDAG 66

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
             V   +                     +    +  +               R +    A
Sbjct: 67  WAVPRPVIGPVDLSDDRALGVALVVLVSLVAAALGAL---------------RNSPSGRA 111

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              +R    A  +   +++  KL  F +S+   G  G  +A+   RI+   F     ++ 
Sbjct: 112 MLAVRSAPAAAMASGVSVLRTKLLLFTLSAGLAGFGGVLYASYNTRITATDFTAMTGLVW 171

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
           +++V+  G+        A  +      L    
Sbjct: 172 LAVVVAAGVRRAPYAVVAGLVFAVAPRLLSDY 203


>gi|300920708|ref|ZP_07137114.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 115-1]
 gi|300412279|gb|EFJ95589.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 115-1]
          Length = 340

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 88/317 (27%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 37  LLVVIAILYLVFSLNSPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 95

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A                      VS  ++      + L         L      ++ + +
Sbjct: 96  AF---------------------VSVCLAFLLQFEVPLAVACLLVLLLGALMGTLAGVLR 134

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +        +     F+   +   I             + +    L M  L 
Sbjct: 135 GVFNVPSFVATLGLWSALRGMGLFMTNALPVPIDENEVLDWLGGQFLGVPVSALIMMVLF 194

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 195 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 254

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 255 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 314

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 315 VVRGVIIVVAVLANILL 331


>gi|225573494|ref|ZP_03782249.1| hypothetical protein RUMHYD_01687 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039143|gb|EEG49389.1| hypothetical protein RUMHYD_01687 [Blautia hydrogenotrophica DSM
           10507]
          Length = 329

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/319 (12%), Positives = 92/319 (28%), Gaps = 24/319 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R +          +V  ++     G   S   I ++  Q  +  + A G + V+   G 
Sbjct: 19  MRRSPSTGAAVAFVLVLIVMTIFGKGVFFSTNNIINILRQGAVLSVVAIGQTFVI-VSGG 77

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     ++   +       Y +++ +   ++  I    G + G      +   +   
Sbjct: 78  IDLSVAPMVSLSTVAVSACIVNYEMNLAVACLIAVAICALLGCLNGALITFVKIPPIIAT 137

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L+          G  +        T V    +   FP S V+  +    
Sbjct: 138 LATSMAFQGLCLLY-------SEGYGINLPQGHPLTEVLGRGKIAGFPLSGVLMIVIYLI 190

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
             + +           R T +      I  N +A      ++    +  + +S    G+A
Sbjct: 191 FFVVL-----------RYTKMGRVTYGIGGNAEAVRLSGISLNKYSIYIYTISGFTAGVA 239

Query: 246 GAFFAASRDRISPDMFKFSENIIVIS-----IVILGGMTSLSKIAKATAILIGVVELCCG 300
           G       +   P   +  +   + +       + GG+ S+        IL  +      
Sbjct: 240 GILLTGRLNCGHPYNGEAMDLNSIAAVVLGGSSVSGGIGSIWGTLIGVFILTMIENGLNM 299

Query: 301 MNFYYFNSLLKFDCSFNMR 319
           MN   +   +       + 
Sbjct: 300 MNMNPYLQQMVKGLIIVIA 318


>gi|307129521|ref|YP_003881537.1| sugar ABC transporter permease [Dickeya dadantii 3937]
 gi|306527050|gb|ADM96980.1| sugar ABC transporter, permease protein [Dickeya dadantii 3937]
          Length = 346

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 105/314 (33%), Gaps = 11/314 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  +          +++ I ++  ++ IY + A G++ V+ + G + L+     
Sbjct: 33  VFIFMILLLIFFQSQNSNFLTERNITNILTEVSIYGIMAVGMTFVILTAG-IDLSVGSIL 91

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +   +              +    G   ++     L        +  L ++   +
Sbjct: 92  AVCAMTAAYVIKGDN----FTTVDAQAWGGMSWLVGLGICLAMGTVIGFLHGLGVT---R 144

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L  +     G         +   G  +      +R+     +  + +   +  +  L 
Sbjct: 145 LRLSPFIVTLGGMTIWRGLTLVINDGAPIAGFDPGYRWWGRGELLGVSIPIWIFALVALI 204

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + L   +T        I  N +A       +    +S + V  A  G+AG   +A   
Sbjct: 205 GWLAL--HKTRWGRFVYAIGGNTEAARLAGVNVQRVLVSVYVVIGALAGLAGFILSARLG 262

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                    S  + VI+ V++GG + +    + +  +IG + +   +N     ++  +  
Sbjct: 263 SAEAVA-GISFELRVIASVVIGGTSLMGGYGRISGTIIGSIIMGILINGLVLMNVSAYYQ 321

Query: 315 SFNMRHTTLMVIAL 328
                   ++ +A 
Sbjct: 322 QIITGLIIVLAVAF 335


>gi|171060110|ref|YP_001792459.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
 gi|170777555|gb|ACB35694.1| inner-membrane translocator [Leptothrix cholodnii SP-6]
          Length = 309

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 103/305 (33%), Gaps = 16/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y + A G  ++  + G+ +          A +           +     + A +
Sbjct: 12  LMAGMLYSLIALGFVLIYKASGVFNFAQGAMVLFAALAMARFAEWAPQLLGFDNKILANL 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL----IKWKPITNGKAGIYVADRLYF 158
            G    ++ + ++ +  +   +  L+  E    ++    I +     G+           
Sbjct: 72  IGFGMAMLAMIAVAWVIERFVLGKLVNQEGITLLMATLGITYFLDGFGQTLFGSDIYKID 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G     L  F       V+      Y  +    L A++ L+ ++TA   A R + D+ +
Sbjct: 132 VGLPKDPLFLFESVFQGGVLISQEDLYAAVIAAALVAALSLFFQKTATGRALRAVADDHQ 191

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +    +  ++V+     +AG  + +               +  + +VILGG+
Sbjct: 192 AAQSIGIPLSRIWVIVWSVAGFVALVAGMIWGSKLGVQFSLS---LVALKALPVVILGGL 248

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+    +L        F   ++   +          +   L +++R   
Sbjct: 249 TSVPGAIIGGLIIGVGEKLSEVYIGPMFGGGIEIWFA---------YVLALLFLVVRPQG 299

Query: 339 LLRLR 343
           L   +
Sbjct: 300 LFGEK 304


>gi|319790854|ref|YP_004152494.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315593317|gb|ADU34383.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 286

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 96/297 (32%), Gaps = 26/297 (8%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           ++  +   GLSI +G +  ++L       +G Y+  +L + +GL   L +  + + +   
Sbjct: 13  MLLFLIGVGLSITMGLMNFVNLAHGSFAMVGGYAASLLMNHWGLGFGLSLAAAFVSAALV 72

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G ++     +       +  +++S     + I       G             G      
Sbjct: 73  GAVLEFVFYRRLYRAHPLDQVLLSIGVVFVSIAAFTYFFGPTMQPFTLPPSLDGQ----- 127

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                     +    +  ++++    + A+++L L +T      R   DNQ+        
Sbjct: 128 -----VAIGGLEVGRYRLFLIVCGVAVLAALLLVLGKTRYGAMVRAAVDNQRVAGGTGIH 182

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +       F++             +         F     +  + +V +GG  +++    
Sbjct: 183 VQRLFFLTFSLGCGL--AGLGGALSLGMLGLEPSFPLKYLVYFLMVVCVGGAGTVTGPFI 240

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
           A  ++  V                     +      L+ + + +++L+R + ++  +
Sbjct: 241 AALLVGIVDVAGKYY--------------WPEAGAFLIYVFMIVMLLVRPNGIVAKK 283


>gi|227113179|ref|ZP_03826835.1| putative sugar ABC transporter, permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 343

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/314 (13%), Positives = 105/314 (33%), Gaps = 11/314 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  +          S++ I ++  ++ IY + A G++ V+ + G + L+     
Sbjct: 30  VFIFMILLLIFFQSQNSNFLSERNITNILTEVSIYGIMAVGMTFVILTAG-IDLSVGSIL 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +        G +   + P +         +    ++     +L    +    +  
Sbjct: 89  AVCAITAA--SVIKGDNFTTVDPDAWYGLSWLVALGVCLAMGTFIGFLHGLGVTKLRLPP 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+        G         +   G  +      +R+     I  I +   +  +  L 
Sbjct: 147 FIVT-----LGGMTIWRGLTLVMNDGAPIAGFDPGYRWWGRGEILGISVPIWIFALVALL 201

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + L   +T        I  N +A       +    +S + V     G+AG   +A   
Sbjct: 202 GYLAL--HKTRWGRFVYAIGGNTEAARLAGVNVQRVLVSVYVVIGCLAGLAGFILSARLG 259

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                    +  + VI+ V++GG + +    + +  +IG + +   +N     ++  +  
Sbjct: 260 SAEAVA-GITFELRVIASVVIGGTSLMGGYGRISGTIIGSIIMGILINGLVLMNVSAYYQ 318

Query: 315 SFNMRHTTLMVIAL 328
                   ++ +A 
Sbjct: 319 QIITGLIIVLAVAF 332


>gi|50120400|ref|YP_049567.1| putative sugar ABC transporter permease [Pectobacterium
           atrosepticum SCRI1043]
 gi|49610926|emb|CAG74371.1| putative sugar ABC transporter, permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 343

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/314 (13%), Positives = 105/314 (33%), Gaps = 11/314 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  +          S++ I ++  ++ IY + A G++ V+ + G + L+     
Sbjct: 30  VFIFMILLLIFFQSQNSNFLSERNITNILTEVSIYGIMAVGMTFVILTAG-IDLSVGSIL 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +        G +   + P +         +    ++     +L    +    +  
Sbjct: 89  AVCAITAA--SVIKGDNFTTVDPDAWYGLSWLVALGVCLAMGTFIGFLHGLGVTKLRLPP 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+        G         +   G  +      +R+     I  I +   +  +  L 
Sbjct: 147 FIVT-----LGGMTIWRGLTLVMNDGAPIAGFDPGYRWWGRGEILGISVPIWIFALVALL 201

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + L   +T        I  N +A       +    +S + V     G+AG   +A   
Sbjct: 202 GYLAL--HKTRWGRFVYAIGGNTEAARLAGVNVQRVLVSVYVVIGCLAGLAGFILSARLG 259

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                    +  + VI+ V++GG + +    + +  +IG + +   +N     ++  +  
Sbjct: 260 SAEAVA-GITFELRVIASVVIGGTSLMGGYGRISGTIIGSIIMGILINGLVLMNVSAYYQ 318

Query: 315 SFNMRHTTLMVIAL 328
                   ++ +A 
Sbjct: 319 QIITGLIIVLAVAF 332


>gi|145223193|ref|YP_001133871.1| inner-membrane translocator [Mycobacterium gilvum PYR-GCK]
 gi|315443651|ref|YP_004076530.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Mycobacterium sp. Spyr1]
 gi|145215679|gb|ABP45083.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Mycobacterium gilvum PYR-GCK]
 gi|315261954|gb|ADT98695.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Mycobacterium sp. Spyr1]
          Length = 352

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 93/284 (32%), Gaps = 13/284 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             + A+   +   +     +    + ++        + A G+++++   G   L+  +A 
Sbjct: 37  AGIGAIGIFVFFLVVAPPFREASSLATVLYASSTIGIMACGVAVLM-IGGEFDLSAGVAV 95

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              + +  +L     L++W+   ++ +++   G   G   +K +     I       +  
Sbjct: 96  TFSSLAASMLAYNLHLNLWVGALLALVLALTVGFFNGFLVMKTKIPSFLITLSTFFMLAG 155

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L   K +    A   V+D   +             F SSF ++ + +   ++     +
Sbjct: 156 INLAVTKLVAGQVATQSVSDMQGWDSAQ-------KVFASSFTLFGVGIRITVVWWLVFT 208

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     L +T + N    +  +  +  ++   +   K+  F          G     + +
Sbjct: 209 AVATWVLFKTKVGNWIFAVGGDADSARAVGVPVTKVKIGLFMFVGFCAWFVGMHLLFAFN 268

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIG 293
            +       +E   +I+ VI      GG  +    A    I   
Sbjct: 269 TVQSGQGIGNEFFYIIAAVIGGCLLTGGYGTAIGAAIGALIFGM 312


>gi|194439651|ref|ZP_03071722.1| ribose transport system permease protein RbsC [Escherichia coli
           101-1]
 gi|253772343|ref|YP_003035174.1| inner-membrane translocator [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254162731|ref|YP_003045839.1| Ribose transport system permease rbsC [Escherichia coli B str.
           REL606]
 gi|300931266|ref|ZP_07146606.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 187-1]
 gi|194421398|gb|EDX37414.1| ribose transport system permease protein RbsC [Escherichia coli
           101-1]
 gi|253323387|gb|ACT27989.1| inner-membrane translocator [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253974632|gb|ACT40303.1| Ribose transport system permease protein rbsC [Escherichia coli B
           str. REL606]
 gi|253978797|gb|ACT44467.1| Ribose transport system permease protein rbsC [Escherichia coli
           BL21(DE3)]
 gi|300460920|gb|EFK24413.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 187-1]
 gi|323960678|gb|EGB56302.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H489]
 gi|323971594|gb|EGB66825.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli TA007]
          Length = 327

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 81/262 (30%), Gaps = 21/262 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               ++  L          + + I ++ +Q  +  + A G++ V+ + G + L+     A
Sbjct: 28  LFSLIILVLFFSFSSPFFFNTENIMTIALQTSVIGIMAIGVTFVIITAG-IDLSLGSVVA 86

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
               +  I  +        +  ++ +++G     +    +        IATL +    + 
Sbjct: 87  FSGVAVGICATLGL--PLPVCIIAGVLAGGMCGYVNGLLVTKMTIPPFIATLGLMMSVR- 143

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                     G   +    R  +                  + Y +F   ++        
Sbjct: 144 ----------GINMVMTDGRAIYFADYPMFKTLAQGRLFDVLPYPVFYLVIVA------L 187

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L++T I      +  N+ A       +   K+  +A      G+AG   A+  + 
Sbjct: 188 VGAYILKKTVIGRYVYAVGSNEVAAHLSGIKVQRVKIFVYAFCGLLTGIAGVILASRLNS 247

Query: 256 ISPDMFKFSENIIVISIVILGG 277
                      +  I+ V++GG
Sbjct: 248 -GQPTVGVGYELEAIAAVVIGG 268


>gi|30261967|ref|NP_844344.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. Ames]
 gi|47527230|ref|YP_018579.1| branched chain amino acid ABC transporter permease [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49184807|ref|YP_028059.1| branched-chain amino acid ABC transporter permease [Bacillus
           anthracis str. Sterne]
 gi|65319250|ref|ZP_00392209.1| COG0559: Branched-chain amino acid ABC-type transport system,
           permease components [Bacillus anthracis str. A2012]
 gi|165870177|ref|ZP_02214833.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0488]
 gi|167633044|ref|ZP_02391370.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0442]
 gi|167638459|ref|ZP_02396736.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0193]
 gi|170686574|ref|ZP_02877795.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0465]
 gi|170706035|ref|ZP_02896497.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0389]
 gi|177650900|ref|ZP_02933797.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0174]
 gi|190566439|ref|ZP_03019357.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis Tsiankovskii-I]
 gi|196036758|ref|ZP_03104149.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus W]
 gi|218903087|ref|YP_002450921.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus AH820]
 gi|227815245|ref|YP_002815254.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. CDC 684]
 gi|228914556|ref|ZP_04078165.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228927029|ref|ZP_04090095.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228945579|ref|ZP_04107929.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|229090950|ref|ZP_04222174.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus Rock3-42]
 gi|229121515|ref|ZP_04250742.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus 95/8201]
 gi|229603414|ref|YP_002866338.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0248]
 gi|254684530|ref|ZP_05148390.1| branched-chain amino acid ABC transporter, permease [Bacillus
           anthracis str. CNEVA-9066]
 gi|254721288|ref|ZP_05183078.1| branched-chain amino acid ABC transporter, permease [Bacillus
           anthracis str. A1055]
 gi|254734833|ref|ZP_05192545.1| branched-chain amino acid ABC transporter, permease [Bacillus
           anthracis str. Western North America USA6153]
 gi|254741234|ref|ZP_05198922.1| branched-chain amino acid ABC transporter, permease [Bacillus
           anthracis str. Kruger B]
 gi|254755488|ref|ZP_05207522.1| branched-chain amino acid ABC transporter, permease [Bacillus
           anthracis str. Vollum]
 gi|254760024|ref|ZP_05212048.1| branched-chain amino acid ABC transporter, permease [Bacillus
           anthracis str. Australia 94]
 gi|30256593|gb|AAP25830.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. Ames]
 gi|47502378|gb|AAT31054.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. 'Ames Ancestor']
 gi|49178734|gb|AAT54110.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. Sterne]
 gi|164714065|gb|EDR19586.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0488]
 gi|167513760|gb|EDR89129.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0193]
 gi|167531856|gb|EDR94521.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0442]
 gi|170129037|gb|EDS97902.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0389]
 gi|170669650|gb|EDT20392.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0465]
 gi|172083361|gb|EDT68422.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0174]
 gi|190562574|gb|EDV16541.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis Tsiankovskii-I]
 gi|195990641|gb|EDX54618.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus W]
 gi|218538914|gb|ACK91312.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus AH820]
 gi|227007772|gb|ACP17515.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. CDC 684]
 gi|228661979|gb|EEL17592.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus 95/8201]
 gi|228692351|gb|EEL46086.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus Rock3-42]
 gi|228814097|gb|EEM60368.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228832764|gb|EEM78335.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228844875|gb|EEM89917.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|229267822|gb|ACQ49459.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus anthracis str. A0248]
          Length = 286

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 103/305 (33%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  +  LI  
Sbjct: 8   FVNGISTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYVLALIGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 68  IAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKVFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L     F    VI   +  +V+L    +  +++L L++T I    R    +++
Sbjct: 116 PIGAKLPLWLQGSFTFGGVILIKYRLFVILIGIIIYVALLLLLKKTKIGLMIRAGVMDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++ + 
Sbjct: 235 GSVQGSAIASLIVGLAGAFTAYF--------------IPDLSLAINMLMLLFFLIVKPNG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|328953696|ref|YP_004371030.1| ABC-type transporter, integral membrane subunit [Desulfobacca
           acetoxidans DSM 11109]
 gi|328454020|gb|AEB09849.1| ABC-type transporter, integral membrane subunit [Desulfobacca
           acetoxidans DSM 11109]
          Length = 290

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 98/307 (31%), Gaps = 27/307 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ S      IY +   G SI+  +  +++        +GA +  I    +GLS+ L  
Sbjct: 6   QYLFSGLTNGAIYALIGLGFSIIFNATAIINFAQGEFVMLGALT-AISFYSFGLSLPLAF 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +S ++  A G+     +++   +   I+ +I++     ++     +  GK    +    
Sbjct: 65  ILSVVVVTAVGLGFERLAIRPAREATPISLIIITVGGGVLIKGLAMLLWGKDAYSLPPFS 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                       +++  M  L A + L+LR T +  A R    N
Sbjct: 125 GR-----------EPLSIVGATILPQSLWIIGLMFILVAGLELFLRFTLLGKAMRAASFN 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             A   +   +      +F +SSA   +AG   A     +                 ++G
Sbjct: 174 PVAARLVGIRVSQMVQFSFGLSSALGAVAGVLIAPITMGVYDMGSMLGLKG--FCAAVIG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S         +L        G+    +   + F     +                R 
Sbjct: 232 GLGSSFGGVLGGLVLGVAEAFASGLLSSGYRDAVAFLILLLVLFL-------------RP 278

Query: 337 HSLLRLR 343
             L+ LR
Sbjct: 279 QGLIGLR 285


>gi|320159957|ref|YP_004173181.1| ribose ABC transporter permease protein [Anaerolinea thermophila
           UNI-1]
 gi|319993810|dbj|BAJ62581.1| ribose ABC transporter permease protein [Anaerolinea thermophila
           UNI-1]
          Length = 327

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/315 (10%), Positives = 87/315 (27%), Gaps = 26/315 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L+ +V  +   L      +   + ++ +Q  +  + A G+++ +   G + L+     A+
Sbjct: 21  LILLVILVWFALLSPEFLTVGNLLTVALQTSLIALVAIGMTLTI-ITGGIDLSVGSVAAL 79

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                  L +R GL  +  + +  +     G + G   +  R                  
Sbjct: 80  SGALAAGLATRGGLGTYPGLLIGLLTGLGIGFLNGAMIVWGRIPPFVATL---------- 129

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                      +                       F        + +   +  +  ++  
Sbjct: 130 ----------ASMAVARGLTLVYTQGRPIAGLDKAFTFWGGQGALGIPVPVWVLTVVAVL 179

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               L+ T +      +   ++        +   K S + +S     ++G    A     
Sbjct: 180 AYFLLKHTPLGLHIYAVGGGEETTRLAGVNVGLVKFSVYLLSGLCAALSGLILTARLWSA 239

Query: 257 SPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            P++    E   + + V     + GG+  +        I+  +      +    +N  + 
Sbjct: 240 QPNVGVGLELDAIAAAVLGGTSLAGGVGGIPGTLAGAFIIGVLSNGLNLLEMPSYNQQVV 299

Query: 312 FDCSFNMRHTTLMVI 326
               F +       I
Sbjct: 300 KGLVFILAVMLDYFI 314


>gi|190895539|ref|YP_001985831.1| branched-chain amino acid ABC transporter, permease protein
           [Rhizobium etli CIAT 652]
 gi|190699484|gb|ACE93568.1| putative branched-chain amino acid ABC transporter, permease
           protein [Rhizobium etli CIAT 652]
          Length = 295

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 48/316 (15%), Positives = 104/316 (32%), Gaps = 26/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    I    Y + + GL+I+ G L +++      Y +GA+   +L +
Sbjct: 4   IFGIPLQALLGQLLIGLINGSFYALLSLGLAIIFGLLRVINFAHGAQYMLGAFVAYLLLT 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+  W  + ++ +I G  G I+    L+   D   +  L+ +      +        G
Sbjct: 64  YAGIGYWPSLILAPVIVGFAGAIIERLFLRRLYDLDPLYGLLFTFGLALAVEGTFRYLYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G   A      G               F+   I+  +V++    +     L + +T +
Sbjct: 124 SSGQPYATPAALAG----------GANLGFMFLPIYRGWVVVVSLVVCLGTWLLIEKTKL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N          +       +A+ +     AG   A         +   +  
Sbjct: 174 GAYLRAATENAVLVQVFGVNVPVLLTLTYALGAGLAAFAGVLAAPIYQV--SPLMGSNMI 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+        +L     L                  +      ++ +
Sbjct: 232 IVVFAVVVVGGMGSIMGAIITGYVLGIAEGLTKVF--------------YPEASNIVIFV 277

Query: 327 ALFLVILMRSHSLLRL 342
            + +V+L+R   L   
Sbjct: 278 IMAIVLLIRPAGLFGR 293


>gi|120598770|ref|YP_963344.1| inner-membrane translocator [Shewanella sp. W3-18-1]
 gi|120558863|gb|ABM24790.1| inner-membrane translocator [Shewanella sp. W3-18-1]
          Length = 372

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/295 (12%), Positives = 87/295 (29%), Gaps = 26/295 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +  +  +     + A G+S+V+   G + L+     AI       L     + +  ++  
Sbjct: 77  LIDILNRSAPVALLAIGMSLVIA-TGGIDLSVGAVMAIAGAVCANLLLLPDIGLGTVVLA 135

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++    G I G          +    L+M        +  +                 
Sbjct: 136 GLVVGLLAGCINGSLVSFLGIQPIVATLLLMVAGRGVAQLINQG---------------- 179

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                    +   F +  V   + +   +  +  +     L LR+TA+      +  N K
Sbjct: 180 ----QIVTFQHQGFAAIGVGQFLGLPMPIWIVIGMLILTQLLLRKTALGLFIEAVGCNAK 235

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L       KL A+A++     +AG    A       +       +  I  V++GG 
Sbjct: 236 ASRYLGINDKSIKLFAYAIAGLCAALAGMISTADIQGSDANNAGLWLELDAILAVVIGGA 295

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
                        + +  +   +      +++              ++ L +++L
Sbjct: 296 -----ALTGGRFSLFLSIIGALIIQTLATTIIVSGLPAKFNLLIKAIVILTVLLL 345


>gi|258627587|ref|ZP_05722364.1| beta-methylgalactoside transporter inner membrane component [Vibrio
           mimicus VM603]
 gi|258580169|gb|EEW05141.1| beta-methylgalactoside transporter inner membrane component [Vibrio
           mimicus VM603]
          Length = 335

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/326 (9%), Positives = 95/326 (29%), Gaps = 13/326 (3%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F+++  K   I  +L ++  +++     +  S + + ++  Q  + V+ A G++ ++ + 
Sbjct: 7   FAIKHLKEGAIYAVLFILLAVIVIQ-EPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQ 65

Query: 64  GLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           G   L+      + A      +        ++  +    +++    + +    +      
Sbjct: 66  G-TDLSAGRQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGV 124

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           +     +   I     +      N      V            +             +  
Sbjct: 125 VVAYLKVTPFIATLGTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSY 184

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +Y ++ + F+         +T        +  N +A       +    L  +A+S  F
Sbjct: 185 ITFYAIIAIIFMWIL----WNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVF 240

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
               G   A      + ++    E   + + V+      GG+ S++ +     I   +  
Sbjct: 241 YAFGGMLEAGRIGSATNNLGSLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINY 300

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               +    +   +            
Sbjct: 301 GMTYIGVSPYWQYIIKGSIIIFAVAL 326


>gi|126440633|ref|YP_001058690.1| ABC transporter, permease protein [Burkholderia pseudomallei 668]
 gi|126220126|gb|ABN83632.1| ABC transporter, permease protein [Burkholderia pseudomallei 668]
          Length = 311

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 104/314 (33%), Gaps = 22/314 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M   GL+++ G LG+L+      Y +GAY+   + +R    + L+   
Sbjct: 8   LLNGLSYGLLLFMLCAGLTLIFGMLGVLNFAHASFYMLGAYAGYAIAARTSFWVALVAAP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+ +        L        +L    L     +               G+ +   L  
Sbjct: 68  LAVGALGALCERTLLRRVRASGHLDELLLTFGLAYLI-----------AEGVKLVWGLAP 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   V + +    F     ++  +  +++L    +  ++   LR +      R     + 
Sbjct: 117 LAAPVPAALDGAAFTVYGAVFSRYRAFMMLVSIAMLGALWAVLRASRTGLVVRAALTRRA 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  +L   +       FA  +A   +AG   A     +       +   +V +++++GG+
Sbjct: 177 AVEALGHDVPRVMTLVFAAGTALAALAGVIGAPLA--VIEPAMAQTLGSVVFAVIVIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT---------TLMVIALF 329
            SL+    A+ +L               ++      +                +  + L 
Sbjct: 235 GSLAGALVASLVLGCAQTFAAASRASLSDAAQWAGIALPDAWRALTLAQLAPLIPYLLLI 294

Query: 330 LVILMRSHSLLRLR 343
           +V+  R+  L   R
Sbjct: 295 VVLACRARGLFGER 308


>gi|209551425|ref|YP_002283342.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209537181|gb|ACI57116.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 341

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 90/324 (27%), Gaps = 21/324 (6%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGI-QILIYVMFAWGLSIVVGSL 63
              L+ +  ++ +  +   L       +        ++ I Q+ +  + A G++ V+   
Sbjct: 22  PTELSIFLVLVGIALIYEVLGWMFIGQSFLMNSQRLTIMILQVSVIGIIAVGVTQVI-IT 80

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+      + A                              +  LP++      L 
Sbjct: 81  GGIDLSSGSVVGMTAMIATSFAQSSTWG-----------RAVFPSLTDLPAVVPIMVGLL 129

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           I           I     P      G++V+ R      T    +        F+  + + 
Sbjct: 130 IGAAAGLANGALIAYTKIPPFIATLGMFVSARGVAKWYTKGQPVSGITEQFHFIGTKAWP 189

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
             V L +        + LR T        I  N +A       I    +  + ++    G
Sbjct: 190 VVVFLVVA---LIFHIALRYTRYGKFTYAIGANPQAARVSGINIEAHLVKVYVIAGLLAG 246

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +AG   AA  +     M    E   + + VI      GG+  ++     T IL  +    
Sbjct: 247 LAGIVTAARAETAQASMGVGYELDAIAATVIGGTSLTGGVGRITGTVIGTIILGVMTSGF 306

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTT 322
             +    +   +            
Sbjct: 307 TFLRIDAYYQEIVKGLIIVAAVVI 330


>gi|115526216|ref|YP_783127.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115520163|gb|ABJ08147.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 315

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 114/318 (35%), Gaps = 26/318 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +  ++  + A GL+++   LG+L+      Y +GA+    +   +    W  + ++
Sbjct: 10  LNGILFGMLLFLMASGLTVIFSMLGVLNFAHASFYMLGAFFGFQISRWF--GFWPALILA 67

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +++GA G  +    L+       +A L+ +      + +   I  G            +
Sbjct: 68  PLLAGALGTAVERYGLRHVHKNGHVAELLFTFGLAFAIEELVQIIWG---------KSPV 118

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              V +L+ F  F      Y  F  ++LL    +   ++L L++T I    +    +   
Sbjct: 119 DYRVPALLDFPAFTIFSTNYPAFKMFMLLVSVTIFIGLLLVLKKTRIGLIVQAALTHPHM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L   +    +  F V +A   +AG     +   ++          I+  +V++GG+ 
Sbjct: 179 VAHLGHNVGRIFMLVFGVGTALAAVAGVIAGPAL--VTQSNMAALLGPILFVVVVVGGLG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT-------------TLMVI 326
           SL     A+ ++  +      +N    +       ++                   +  +
Sbjct: 237 SLPGAFVASLLIGLIQTFAVSINGSLASLFGPLSPAWAASWVSDIWSVSVAQVAPIVPYL 296

Query: 327 ALFLVILMRSHSLLRLRT 344
            L LV++ R   LL  R 
Sbjct: 297 LLVLVLIFRPMGLLGTRE 314


>gi|315426937|dbj|BAJ48556.1| branched-chain amino acid ABC transporter permease [Candidatus
           Caldiarchaeum subterraneum]
 gi|315426980|dbj|BAJ48598.1| branched-chain amino acid ABC transporter permease [Candidatus
           Caldiarchaeum subterraneum]
          Length = 312

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 87/284 (30%), Gaps = 14/284 (4%)

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           + + +     +IG  + + + S +    +L +  + ++ G   + + L  L+      A 
Sbjct: 34  VPNFSHGSFASIGMMTMLTMTSAFNQPAYLSLLPAFLLGGLAALALYLLVLRPLISRDAS 93

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
               M       LI    +         AD                +F            
Sbjct: 94  LVSQMIATIAFELILIAVLN------IYADYFTQTFKVQSRGFLIRKFDVRIFGEPGVFI 147

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
                       + L L +T      R   +N     +L   +  A   ++ ++    G+
Sbjct: 148 IAPALAVSTVFLLYLLLNKTRFGIGLRAAIENPSLAGTLGINVKRAYTFSWFLAGGLGGV 207

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AG+  A          +     I + +  I+GG+ ++        +L  V  L       
Sbjct: 208 AGSLLA--LWFQGSPNYGSELLISIFAAAIVGGLQNIYGAVAGGYLLGFVEVLGTRQLG- 264

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                L F     +    + ++A+ + +L+    L+ LR  S F
Sbjct: 265 -----LSFGPWITVYRPLIPILAMAITLLLVPQGLVSLRLSSVF 303


>gi|241763905|ref|ZP_04761948.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
 gi|241366800|gb|EER61232.1| inner-membrane translocator [Acidovorax delafieldii 2AN]
          Length = 317

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 52/320 (16%), Positives = 117/320 (36%), Gaps = 27/320 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M + GL+++   +G+L+      Y +GAY          +  W  + V
Sbjct: 10  LLNGVSYGLLLFMLSSGLTLIFSMMGVLNFAHTSFYMLGAYFAY--TISSVVGFWPALLV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +  GA G      SL+    +  +  L+++     ++++   +  G            
Sbjct: 68  APLAVGALGAAFERYSLRRVHKFGHVPELLVTFGLSYLILELVQLVWG---------RST 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + + ++   F      +     +V+L    +  S+ L L RT I    +    + +
Sbjct: 119 VPYGLPTQLQGPLFTLYGTQFPKSRSFVMLVALLMLVSVWLLLTRTRIGLVIQAALKHPE 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +    +  F   +A  G+AG         ++      S   I+  +V++GGM
Sbjct: 179 MVEALGHNVPRVFMMVFGGGAALAGLAGVIGG--NTYVTEPAMAGSVGSIIFVVVVVGGM 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT--------------TLM 324
            SL+    A+ ++  V      +++   ++L     + +                   L 
Sbjct: 237 GSLAGAFLASLLIGLVQTFAVAIDYSLASALQSMGMAVSEATFGWPLLKLTVSQVAPILP 296

Query: 325 VIALFLVILMRSHSLLRLRT 344
            + L L+++ R   LL  R 
Sbjct: 297 YLFLVLILIFRPKGLLGTRE 316


>gi|206579032|ref|YP_002240951.1| putative ribose ABC transporter, permease protein [Klebsiella
           pneumoniae 342]
 gi|206568090|gb|ACI09866.1| putative ribose ABC transporter, permease protein [Klebsiella
           pneumoniae 342]
          Length = 332

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 97/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +         ++  + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 31  ILPILILIVAVFGFIAPNFFTESNLLNITRQASINIVLAAGMTFII-LTGGIDLSVGSIL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A     +       + LL   +A++ G    +     + F G    I TL      +
Sbjct: 90  GTTA--VAAMVVSLIPELALLSIPAALMLGLLLGLFNGALVAFAGLPPFIVTLGTYTALR 147

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                    T                     +     F      Y   + ++++    + 
Sbjct: 148 GAAYLLADGT-------------------TVINSDISFEWIGNDYLGPVPWLVVIALAVI 188

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 189 AVCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGVMSASRLY 248

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 249 SANGNLGVGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 308

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 309 VIKGAVIIIAVLI 321


>gi|329935519|ref|ZP_08285365.1| ABC transporter integral membrane protein [Streptomyces
           griseoaurantiacus M045]
 gi|329304990|gb|EGG48858.1| ABC transporter integral membrane protein [Streptomyces
           griseoaurantiacus M045]
          Length = 339

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 80/296 (27%), Gaps = 27/296 (9%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
               + +  +  Q  +  +   G++ V+ + G + L+     A+   S            
Sbjct: 57  FLDTRNLQLVLTQASVIGVVTVGMTFVI-TSGGIDLSVGAIVALS--SVWATTVATQSHG 113

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
              I ++A + G    ++    + + G    IATL M    + + ++          +  
Sbjct: 114 LAGILLAATLVGLGCGLVNGVLIAYGGVVPFIATLAMLASARGLALQITDGRTQVVTVRG 173

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
              L    T V  +       ++  +                    L   RT        
Sbjct: 174 VLDLGERETYVLGVPPLVLVFAAVAVAG-----------------WLLFHRTTFGRRTIA 216

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +  N +A       +   +L  + +S    G+A             +       +  I+ 
Sbjct: 217 VGGNPEAARLAGIDVRRQRLYLYLLSGLCCGIAAFLLIVLAGS-GQNTNGNLYELDAIAA 275

Query: 273 VIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI+      GG  +++       I   +  L    N       +            
Sbjct: 276 VIIGGTLLSGGRGTVTGSVLGVLIFTTITNLFALNNLQTDVQQIAKGAIIVAAVLV 331


>gi|307546558|ref|YP_003899037.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307218582|emb|CBV43852.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 354

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 81/313 (25%), Gaps = 11/313 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +      L   L +    +   +  M   I +  + + G+++V+ + G + L+     
Sbjct: 33  IFVALFAVLLYFSLTVDNFLTMNNMLIMAQHITVIGILSIGMTLVILTAG-IDLSVGSTV 91

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
                            I L      +      ++  L          A+ T +    F 
Sbjct: 92  GFSGMVSGF---LLMNGIPLGDYTLFLSVPEVILLTCLVGAFIGYINGALITYLNVAPFI 148

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L     +               L          F F  +  +  I +   LL +  L 
Sbjct: 149 ATLGMLYVVRGAALLFNDGGTFSQLQGHEELGNTGFSFLGNGSLLGIGIPVWLLLILTLV 208

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +    +T        I  N+ A       +   KL  +  S     + G    +   
Sbjct: 209 TWFV--SYKTPFGRYVYAIGGNENAAIFSGLRVRKIKLWVYVFSGFCAAIVGLVITSQLQ 266

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++V     + GG  S+        ++  + +         F  +
Sbjct: 267 TGHPMTGDTYELRAIAAVVLGGTALAGGRGSVIGSVIGACVISILNDGMVMSGVSDFWQM 326

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 327 VIMGLVIIIAVVI 339


>gi|281180293|dbj|BAI56623.1| ribose ABC transporter permease component [Escherichia coli SE15]
          Length = 329

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 103/321 (32%), Gaps = 27/321 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           ++ +    +    VV  +L      +  +   I ++ +Q+ I  + A+G++ V+  LG +
Sbjct: 22  KVFRQYGGILSGMVVLIILFSFINDSFFTANNITNIILQVSIIAITAYGMTYVL-LLGDI 80

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+      +  S      ++L+   ++I+     ++        G    I T
Sbjct: 81  DLSVGSTIALIGTFAALGAS--WGIPFVLLVPLSIIAALALGMINGGLTAIAGIPSFIVT 138

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           +    IF+ I                             +I+   F +      +++   
Sbjct: 139 VATMGIFRGIAYIVTDGM-------------------PIMIKDDAFLALGNGEFLYIPIP 179

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  L       L +T           N++A       +   K+  F +++   G++G
Sbjct: 180 IWILIILLLINHFILTKTTFGRKIYITGGNKEAAIYSGINVTRLKIKVFMITAVLAGISG 239

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGM 301
              A+      P+     E   + + V+      GG  ++         +  +      M
Sbjct: 240 MILASRLYSGQPNSALSYELDAIAAAVLGGTSLNGGYGTVVGTVIGALTIGVINNGMNLM 299

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
           N  YF  ++       +    
Sbjct: 300 NVPYFYQMVVKGLVILVAVYF 320


>gi|209520097|ref|ZP_03268872.1| Monosaccharide-transporting ATPase [Burkholderia sp. H160]
 gi|209499470|gb|EDZ99550.1| Monosaccharide-transporting ATPase [Burkholderia sp. H160]
          Length = 336

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/330 (11%), Positives = 96/330 (29%), Gaps = 30/330 (9%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F+ +     +IL +  ++     F       +   + ++   I    + A+G  I++   
Sbjct: 23  FASQWAAELRILLVAVILAAYFEFANHDFLFTNASLVNLSQFIAPVAIIAFG-EIMLMIG 81

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+  + +A   +   +     G  +WL +    + +   G + G  ++  R     
Sbjct: 82  GDIDLSAGMVFAFAPFMM-VFAYDAGAPMWLAVIAGLVAAAIIGFVNGAVTVWLRLPSFV 140

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
                                    G         L  +  +       P+       + 
Sbjct: 141 T----------------------TLGTLFLINGITLTVSRGTPAYTPGSPTFAGFMGAWG 178

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           Y  ++    ++ ++ + LR T      +    N          +   +L  F +++   G
Sbjct: 179 YSEIIWTLVIAFAMHVLLRHTRWGLHTQAAGANPLGASEAGIHVRRLRLGNFILAAVLAG 238

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVEL 297
             G   A     I P         + ++  ++GG        ++       A+L  + + 
Sbjct: 239 FTGMLEAFRITSIDPQAGGNQIMFLAVAAAVIGGTPLTGGSGTIVGGLIGAAVLGILNDG 298

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              +    F   +    +        + + 
Sbjct: 299 FTLIGINAFTFNIILGAAILAAMVFNIHVG 328


>gi|160937924|ref|ZP_02085282.1| hypothetical protein CLOBOL_02818 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439150|gb|EDP16904.1| hypothetical protein CLOBOL_02818 [Clostridium bolteae ATCC
           BAA-613]
          Length = 318

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/281 (11%), Positives = 85/281 (30%), Gaps = 28/281 (9%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
                  +   I ++ IQ     + A G++ V+   G + ++   + A+ +     L   
Sbjct: 32  ALSNIFLTPSNIRNILIQSGTNAIIAVGMTYVI-ISGNIDISVGASLALSSCVGATLMVG 90

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
            G           + +     I+          YL     I++     +      +  G 
Sbjct: 91  TGNVGL------GVAAVLLTGILLGLFNGSLVAYLGFPPFIVTLSTMWLFRGMAYLYTGG 144

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
             +                       S  +   +++  ++  +  +     + L++T   
Sbjct: 145 QAVVGLP---------------QGMTSFAMGSILYIPNIVWLIAIVYIIGHVALQKTTAG 189

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI------SPDMF 261
                + DN ++       +    L+AF +S     ++G  +    +        S +M+
Sbjct: 190 RKVCAVGDNSESARLSGINVKRVTLAAFVLSGFCAALSGIVYMGRLNSGQPIAGQSYEMY 249

Query: 262 KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
             +  +I  + +  GG+ S+         +  +      +N
Sbjct: 250 AIAAAVIGGASLTKGGIGSMVGTLIGAIFISVLQNGLTILN 290


>gi|304398033|ref|ZP_07379908.1| inner-membrane translocator [Pantoea sp. aB]
 gi|304354319|gb|EFM18691.1| inner-membrane translocator [Pantoea sp. aB]
          Length = 394

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 46/366 (12%), Positives = 101/366 (27%), Gaps = 47/366 (12%)

Query: 3   IFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
            F+L   +   +L  + ++     +   G+  S + + ++  Q  I  + A G+  V+ S
Sbjct: 22  RFTLPNLQVLVMLGAIVLIALFFTWTTDGSWLSARNVSNLLRQTAITGILAVGMVFVIIS 81

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
              + L+      +   +  I     G  + L I V+ ++    G   G      +    
Sbjct: 82  A-EIDLSVGSMMGLLGGAAAIFDVWLGWPLPLTIVVTLVMGLLLGTWNGWWVAYRKVPSF 140

Query: 123 AIATLIMSEIFQNIL--------------------IKWKPITNGKAGIYVADRLYFLGTT 162
            +    M      ++                               G+            
Sbjct: 141 IVTLAGMLAFRGILVGITDGTTVAPITPGMSQIGQSYLPGGVGFGFGVAGLALFTLWQWR 200

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI---------------------ILWL 201
           +R   +    P       +    +   +   +  +                     +   
Sbjct: 201 LRLRRQQLGLPQGAASGTVGRQAITAILVLGAIWLLNDYRGVPTPVLLLAVLLLAGMFMA 260

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            RTA       I  N  A       +   KL+ FA++   + +AG   ++     SP   
Sbjct: 261 TRTAFGRRIYAIGGNIDAARLSGINVARTKLAVFAINGVMVAIAGLILSSRLGAGSPSAG 320

Query: 262 KFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
             +E   + + VI      GG+ S++       I+  +      M+   F   +      
Sbjct: 321 NIAELDAIAACVIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAIL 380

Query: 317 NMRHTT 322
            +    
Sbjct: 381 LLAVWM 386


>gi|241666643|ref|YP_002984727.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240862100|gb|ACS59765.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 295

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 48/316 (15%), Positives = 104/316 (32%), Gaps = 26/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    I    Y + + GL+I+ G L +++      Y +GA+   +L +
Sbjct: 4   IFGIPLQALLGQLLIGLINGSFYALLSLGLAIIFGLLRVINFAHGAQYMLGAFVAYLLLT 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+  W  + ++ +I G  G I+    L+   D   +  L+ +      +        G
Sbjct: 64  YAGIGYWPSLILAPVIVGLAGAIIERLFLRRLYDLDPLYGLLFTFGLALAVEGTFRYLYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G   A      G               F+   I+  +V++    +     L + +T +
Sbjct: 124 SSGQPYATPAALAG----------GANLGFMFLPIYRGWVVVVSLVVCLGTWLLIEKTKL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R   +N          +       +A+ +     AG   A         +   +  
Sbjct: 174 GAYLRAATENAVLVQVFGVNVPVLLTLTYALGAGLAAFAGVLAAPIYQV--SPLMGSNMI 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+        +L     L                  +      ++ +
Sbjct: 232 IVVFAVVVVGGMGSIMGAIITGYVLGIAEGLTKVF--------------YPEASNIVIFV 277

Query: 327 ALFLVILMRSHSLLRL 342
            + +V+L+R   L   
Sbjct: 278 IMAIVLLIRPAGLFGR 293


>gi|146295308|ref|YP_001179079.1| monosaccharide-transporting ATPase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145408884|gb|ABP65888.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 328

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 46/326 (14%), Positives = 107/326 (32%), Gaps = 24/326 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           S F   +   +  L  + +V   ++ +      + + + +  + +    + A G++IV+ 
Sbjct: 13  SFFKKLMGFREITLIFIIIVISAIISILSPNFLTAENLITTALGLAADGILAIGMTIVL- 71

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G + L+      + A     L   +G++IW+   ++ ++    G+  G    +     
Sbjct: 72  VSGGVDLSVGSVLGLSAVIAGGLYLSFGVNIWIGSLIALIVCALIGLFNGYFIARVGIPP 131

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           L +   +M                       A  +   G+ +        F        +
Sbjct: 132 LIVTLAMMGIA------------------RGAAYVLTQGSPLALYGNLKGFDFLGQGKIL 173

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            + + ++   FL       +R++A       +  N+ A       +   K+S + + S  
Sbjct: 174 GIPFFIVFFIFLIILFDFLMRKSAPFRLVYYVGSNENAAKLSGINVPNVKISVYVLMSVL 233

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+AG F  +     +P     SE   + + VI      GG  ++      T ++  +  
Sbjct: 234 AGIAGIFTLSRFSVAAPTAGNGSELNAISACVIGGASLAGGEGTVLGAILGTILVGIINN 293

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               +N   +   L          T 
Sbjct: 294 ALVLLNVSVYWQNLVSGLILIAAVTI 319


>gi|298291553|ref|YP_003693492.1| inner-membrane translocator [Starkeya novella DSM 506]
 gi|296928064|gb|ADH88873.1| inner-membrane translocator [Starkeya novella DSM 506]
          Length = 341

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/320 (12%), Positives = 80/320 (25%), Gaps = 14/320 (4%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
               L  L ++  + +            I ++        + A G ++V+   G   L+ 
Sbjct: 25  RIGFLPALLILVIVGMSAVDPQFYGPINILNILRNAAFLTIIACGQALVI-IGGGFDLSV 83

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A+ +            S      +      A G+  G               L+  
Sbjct: 84  GAVVALASVVTAKTMGVIAASFPGNDALIIAGGLAAGLGSGA-----------AVGLVNG 132

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                + +    +T G         L          +               +   +   
Sbjct: 133 LCVARLKVSGFVVTLGTMSATAGVALMITSGIPVYGMPQSFVRDFGRAQFFGLPTAIYVA 192

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +   ++   RRT        I  N  A            +  + +S     + G    
Sbjct: 193 LIVLLVMVFVQRRTLFGRYVYAIGGNTDAAIVSGVGTRRHLVGTYVLSGVLAALTGILLT 252

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           A               +  I+  ++GG+ SL         ++ V  L   +     N L 
Sbjct: 253 AQVGSGQASFGGDRMMLQSIAAAVIGGV-SLRGGV-GRVEIVAVSALFLTILGNALNLLH 310

Query: 311 KFDCSFNMRHTTLMVIALFL 330
                  +    +MV+A+ L
Sbjct: 311 IDSRLQPVFLGIIMVVAVAL 330


>gi|167765796|ref|ZP_02437849.1| hypothetical protein CLOSS21_00287 [Clostridium sp. SS2/1]
 gi|317496886|ref|ZP_07955216.1| branched-chain amino acid transport system/permease component
           [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167712513|gb|EDS23092.1| hypothetical protein CLOSS21_00287 [Clostridium sp. SS2/1]
 gi|291559160|emb|CBL37960.1| monosaccharide ABC transporter membrane protein, CUT2 family (TC
           3.A.1.2.-) [butyrate-producing bacterium SSC/2]
 gi|316895898|gb|EFV18050.1| branched-chain amino acid transport system/permease component
           [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 346

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 85/310 (27%), Gaps = 31/310 (10%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQ---------KYIDSMGIQILIYVMFAWGLS 57
           ++  Y     ++ +   LL  L    +  +          Y+  +  +    ++ A G++
Sbjct: 6   KMTSYRLFWPIVCLALVLLFNLIKSPSFFEISIKNGVLYGYLVDIFNRSSELIILAVGMT 65

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           + V S     ++     A+     V L           I    +      +         
Sbjct: 66  LCVASSAGTDISVGAIMALSGAVSVYLLGSGETYAIPWIAAILIGLVVSVLCGM------ 119

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                    L+ +   Q ++      T G+    +      L   V S      F     
Sbjct: 120 -----WNGFLVANMKIQPMVATLILFTAGRGMAQLITGGNNLYVKVDSFKYLGGFLPHIP 174

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +    +  +++          L+L +TA      ++  N +A               +A 
Sbjct: 175 VPTPILVAIIVV-----ILATLFLNKTATKLYIESVGINPRASRLFGLNSTKIIFITYAA 229

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT------SLSKIAKATAIL 291
                G+AG    +    I  +       +  I  V LGG +      S++        +
Sbjct: 230 CGLCAGIAGMIATSRITSIDANNVGNLMELDAILAVALGGNSLAGGKFSVAGSVIGAITI 289

Query: 292 IGVVELCCGM 301
             +      M
Sbjct: 290 QALSTTLYAM 299


>gi|295111130|emb|CBL27880.1| monosaccharide ABC transporter membrane protein, CUT2 family (TC
           3.A.1.2.-) [Synergistetes bacterium SGP1]
          Length = 424

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 78/304 (25%), Gaps = 15/304 (4%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-------SYVI 83
                 +    +  Q    ++ A G+   +   G   L+      + A        +   
Sbjct: 116 PRFMQVRVALDVLTQSSTRLIIALGICFTLLIAG-TDLSAGRMVGLAAVVSTSMLQTSAY 174

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPI 143
               +     + + +  +++    M  G  +      Y     +        I       
Sbjct: 175 ANRFFPDLPQVSVWLPILLAVLACMAFGALNGFLVAKYDMHPFIATLATQVIIYGACSLY 234

Query: 144 TNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRR 203
            +                T    ++ F          I +   +  +  +    IL   +
Sbjct: 235 FDMPPNNSQPIGGIRPDFTALGQMKVFASSEPGGFPGISILIPIAAVICVLIWFILN--K 292

Query: 204 TAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           T        I  N++A      ++    +  F ++S   G+AG   AA     + +    
Sbjct: 293 TVFGKNVYAIGGNREAAVVAGISVFRNIMGIFILASCLYGIAGVLEAARTAGATNNYGNG 352

Query: 264 SENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            E   + + V+      GG+  +S I     I   +      +N       +        
Sbjct: 353 YELDAIAACVVGGVSLNGGIGRVSGIVSGVLIFTIIQYGLQFVNVSPMWQQVIKGVIIAA 412

Query: 319 RHTT 322
               
Sbjct: 413 AVAI 416


>gi|153011715|ref|YP_001372929.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
 gi|151563603|gb|ABS17100.1| inner-membrane translocator [Ochrobactrum anthropi ATCC 49188]
          Length = 304

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 106/306 (34%), Gaps = 15/306 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +  ++  + A GL+++ G +G+++L     Y IGA+    +  +   + WL +P 
Sbjct: 8   LLNGLLYGVMLFLLAAGLTLIFGIMGVINLAHGSLYMIGAFIGTWVAVQT-GNFWLGLPA 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G+++ L  ++       +  ++ +     I  +   +  G+  I+       
Sbjct: 67  AILAATIAGIVIELGVMRKLYQRDHLDQVLATFSLILIFNELTVLIFGRQPIFTQLPASL 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                           S + Y  F   +++    ++  + L + RT I    R    N+ 
Sbjct: 127 SQPIE---------LFSGLSYPPFRLLIIVAGLLVAGGLYLLINRTRIGMLVRAGSTNRD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       FA+ +AF G+AG               +      V+ ++    +
Sbjct: 178 MVRALGVDIRLLYTLVFALGAAFAGLAGFMTGPILAVQVGMGEQILLATFVVVVIGG--V 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL---MVIALFLVILMR 335
            S+     A   L  +               +    +  +        + + + +V+L R
Sbjct: 236 GSIKGAFIAGISLGIIDTCLRAFLPSILRQFMAGAEADALGVGIASMGIYLLMAIVLLFR 295

Query: 336 SHSLLR 341
              L  
Sbjct: 296 PRGLFP 301


>gi|150397642|ref|YP_001328109.1| monosaccharide-transporting ATPase [Sinorhizobium medicae WSM419]
 gi|150029157|gb|ABR61274.1| Monosaccharide-transporting ATPase [Sinorhizobium medicae WSM419]
          Length = 349

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 94/312 (30%), Gaps = 11/312 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+    L        +   + ++  Q     + A G + V+ + G+      IA  
Sbjct: 33  LIALVLLMAYLAFATSNFLTFDNLSNVARQSAFVAIIAVGQTFVILTGGIDLSVAAIAAL 92

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             + + V+L     L       V   ++   G+ +G+ +            LI      +
Sbjct: 93  AASITAVLLTQPLVLFGVDFGFVPPPVAVLIGLFIGVAAGAI------NGWLISKFKIPD 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +     +T  +    +      + +                     +    L     +A
Sbjct: 147 FIATLGTMTAFRGAALLVTDGLPVPSFNAGRQLPETLIWVGGGQLFGVPVSALIALLCAA 206

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    LR TA+  A   +  N+ A  S   +I   K+  +A+S     +AG       + 
Sbjct: 207 AGWYVLRYTALGRAIYAVGGNRAAAHSSGISISRTKIMTYAISGLLAAIAGIILVGRLNS 266

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            +  M +  E   + S+VI      GG   +       AI+  +      ++   F   +
Sbjct: 267 ANALMAEGEELRSIASVVIGGTNLFGGEGGVWGSIIGAAIIGVLGNGLNLLDVSPFWQRI 326

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 327 AQGIVIVVVVIF 338


>gi|323702360|ref|ZP_08114025.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574]
 gi|323532666|gb|EGB22540.1| inner-membrane translocator [Desulfotomaculum nigrificans DSM 574]
          Length = 312

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 98/321 (30%), Gaps = 23/321 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             +Y     +  ++  + L +      +   + ++  Q+ I  +   G++ V+   G + 
Sbjct: 8   FQRYRLGPLIGLILIGVFLSILSDRFLTTSNLLNVARQVSINALLGVGMTFVI-LTGGID 66

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+   +       +G++  L + V+ ++    G I G      R         
Sbjct: 67  LSVGSILALSG-ALAAGSLAFGVNPVLAVLVACLVGLVAGTINGTIIAVGRVAPFIAT-- 123

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                    L        G         +               F S    Y   +   +
Sbjct: 124 ---------LATMTLFRGGTLIYTEGRPV---------RAVAEGFNSLGGGYIGPIPTPV 165

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + M  +  +    L +  +      I  N++A           K+  ++VS    G+AGA
Sbjct: 166 IIMALVVLAAWFVLSQMTLGRRIFAIGGNEEAAILSGIKTNRYKILVYSVSGLLAGLAGA 225

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
              +      P        +  I+ V++GG +    +      L+G + +    N     
Sbjct: 226 ILTSRLLSAQPTA-GTGYELDAIAAVVIGGTSLNGGVGGVLGTLVGALIIGVIDNGLNLL 284

Query: 308 SLLKFDCSFNMRHTTLMVIAL 328
           ++  F          L+ + +
Sbjct: 285 NVSSFYQQAVKGLIILIAVLI 305


>gi|302337553|ref|YP_003802759.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
 gi|301634738|gb|ADK80165.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
          Length = 360

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/327 (11%), Positives = 91/327 (27%), Gaps = 11/327 (3%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             +    L +L V + LLL        S   + ++   + I  + A G++ V+   G + 
Sbjct: 16  QARTFIALFILTVAFTLLLSNRGINFLSPINLLTVTKHVAITAILAIGMTFVI-ITGGID 74

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+      +       L           + +   +     + + L +L    + L I   
Sbjct: 75  LSVGSIVGLCGMIAGGLIHEGLNLPMFHMTIYYHVWVIIILTLILGTLIGLVNGLVITRF 134

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++     + + +            +    F     ++ +    FP       I +   +
Sbjct: 135 NVAPFIGTLGMMYIARGFA---NIRSGGATFPNLQGQARLGNTGFPFLGAGKIIGIPVSI 191

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  + A  I   ++T +      I  N +A       +       +A S     + G 
Sbjct: 192 WILIIVLAIGIYVAKKTPLGRHIYAIGGNARAARLSGVKVKRITTIVYAFSGFCSAIVGL 251

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             A+      P   +  E   + + V       L   + +  I      +          
Sbjct: 252 IIASQLVAAHPATGETYEMSAIAAAV-------LGGTSLSGGIGTIGGTIIGAFVMGVLG 304

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILM 334
             L            +  + +   ++ 
Sbjct: 305 DGLVMMGVSEFWQNVIKGVVIVAAVIF 331


>gi|238920028|ref|YP_002933543.1| ribose transport system permease protein RbsC [Edwardsiella
           ictaluri 93-146]
 gi|238869597|gb|ACR69308.1| ribose transport system permease protein RbsC [Edwardsiella
           ictaluri 93-146]
          Length = 342

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/320 (11%), Positives = 98/320 (30%), Gaps = 17/320 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  +      G   S++ I ++  ++ IY + A G++ V+ + G + L+     
Sbjct: 29  VLIFMILLLIFFQSQNGNFFSERNIVNILTEVSIYGIMAVGMTFVILTAG-IDLSVGSIL 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +   +    G +   +   +         +    S+     +L         + +
Sbjct: 88  AVCAMTAAYVIK--GDNFTTVDVSAWGGMSWLIGLGICLSMGTVIGFLHGL-----GVTR 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L  +     G         +   G  +      +R+     +  I +   +  +  + 
Sbjct: 141 LRLPPFIVTLGGMTIWRGLTLVINDGAPIAGFDPGYRWWGRGELIGISIPIWIFALVAIG 200

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + L   +T        I  N +A       +    +S + +     G+AG   +A   
Sbjct: 201 GYLAL--HKTRWGRFVYAIGGNPEAARLAGVNVKRVLVSVYVLIGCLAGLAGFILSARLG 258

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                    S  + VI+ V++GG +                 +   +      + L    
Sbjct: 259 SAEAVA-GISFELRVIASVVIGGTS------LMGGYGRIGGTIIGSIIMGILINGLVLMN 311

Query: 315 SFNMRHTTLMVIALFLVILM 334
                   +  + + L +  
Sbjct: 312 VSAYYQQIITGLIIILAVAF 331


>gi|159042932|ref|YP_001531726.1| high-affinity branched-chain amino acid transport system permease
           livH [Dinoroseobacter shibae DFL 12]
 gi|157910692|gb|ABV92125.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Dinoroseobacter shibae DFL 12]
          Length = 329

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 100/324 (30%), Gaps = 32/324 (9%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV----------------- 82
            +  +  ++Y + A G  ++  + G+ +    +     A + V                 
Sbjct: 13  LNGLMAGVMYALVALGFVLIFKASGIFNYAQGVMALFAAMTLVGIQNGQVPFAHLINAIF 72

Query: 83  ---ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              I    + +   L I ++  +       +    L+   +   I   + +      L  
Sbjct: 73  GTNIHYFGWQVPALLAILLTVFVMIGFAWAVNRFVLRHLVNQEPIILFMATIGLAYFLEG 132

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +  G     +   L            F  F   F I  + +   ++    +S  +++
Sbjct: 133 TADLMWGAEIKKLDVGLPQGLNEAIDETTFNLFGYGFFIDNLDISAAIIATVLVS-GLVI 191

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           + + T    A R + D+ +A  S+  ++ F  +  ++++     +AG  + A        
Sbjct: 192 FSQYTKQGRALRAVADDHQAALSVGISLNFIWVLVWSIAGFVALVAGIMWGAKSGVQFSL 251

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                  +  + +++LGG TS+        I+    +L   +        +         
Sbjct: 252 S---LIALKALPVLMLGGFTSIPGAIVGGLIIGMGEQLFEFL--------IGQPYLGGAT 300

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
                 +   + ++ R   L   +
Sbjct: 301 QNWFAYVLALVFLVFRPQGLFGEK 324


>gi|49477443|ref|YP_036101.1| branched-chain amino acid ABC transporter permease [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|49328999|gb|AAT59645.1| branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 286

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 103/305 (33%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  +  LI  
Sbjct: 8   FVNGISTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYVLALIGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 68  VAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKVFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L     F    VI   +  +V+L    +  +++L L++T I    R    +++
Sbjct: 116 PIGAKLPLWLQGSFTFGGVILIKYRLFVILIGIIIYVALLLLLKKTKIGLMIRAGVMDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++ + 
Sbjct: 235 GSVQGSAIASLIVGLAGAFTAYF--------------IPDLSLAINMLMLLFFLIVKPNG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|116747833|ref|YP_844520.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
 gi|116696897|gb|ABK16085.1| inner-membrane translocator [Syntrophobacter fumaroxidans MPOB]
          Length = 293

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 87/312 (27%), Gaps = 26/312 (8%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +       +  S      IY + A G  ++  + GL++        +GA   + L +  G
Sbjct: 1   MPWQLIPHFFVSGVTNGSIYALIALGYCLIQNATGLVNFAQGEFVMLGAMIVITLHNVMG 60

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           L + L   +S       G  +    ++   +   +  ++++      +     +  GK+ 
Sbjct: 61  LPMPLAFVLSTAAVAIIGTALERGPIRLSRNRDVLTLIMITVGASIAIRGASMMLWGKSS 120

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                          S                   +++         + L+  RT +  A
Sbjct: 121 HV-----------FPSFGGDDPIIVLNAAILPQSLWIMALSLAALVLLYLFFHRTLLGKA 169

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
            R + DN      +  ++      +FA+S A   MAG                    +  
Sbjct: 170 IRGVADNSLGAVLIGISVRRLVALSFALSGALGAMAGVLITPITSM--SYDGGLMLGLKG 227

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            +  ILGG  S              +    G                +     +  + L 
Sbjct: 228 FAAGILGGYGS-------------TLGAVVGGLLLGVLEAFGAGLVSSAYKDAIAFLVLL 274

Query: 330 LVILMRSHSLLR 341
            ++ +R   L  
Sbjct: 275 TILFVRPAGLFG 286


>gi|229917157|ref|YP_002885803.1| inner-membrane translocator [Exiguobacterium sp. AT1b]
 gi|229468586|gb|ACQ70358.1| inner-membrane translocator [Exiguobacterium sp. AT1b]
          Length = 333

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/315 (11%), Positives = 90/315 (28%), Gaps = 14/315 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  +    +  +      +      +   + I  + A G++  +   G   L+     +
Sbjct: 22  LLAILGLIAVFTVTNDQFLTYANFSDIIKSVSIVSLLALGVTFSLIVGG-FDLSVGSTAS 80

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +           +   + + + +   +    G++  L ++KFR   L +ATL +  +   
Sbjct: 81  LATIGAAASLVLHRQELLVALLIPLALGILVGLLNALVTIKFRLPDL-LATLAIMYVING 139

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I + +    +    + +                   F          + +V L M     
Sbjct: 140 IQLTYTKGFSIYDNMPI-------EGGTAPGRFIPSFLFIGQGTIGPIPFVALLMLVFFI 192

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              L+L  T     +  +  N +A       +   KL A+ +S  F  + G   A+    
Sbjct: 193 GAHLFLTYTRTGREFYYVGSNAEAARRSGIAVNRIKLYAYVLSGLFAAIGGIILASRIGT 252

Query: 256 ISPDMFKFSENIIVISI----VILG-GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                        V +      + G G  ++        ++  ++      +  Y+   +
Sbjct: 253 GQVSAGAPLLMDAVAAAYIGYAVFGTGRPNVIGTLIGAILIGILLNGLTMWDVPYYAQDI 312

Query: 311 KFDCSFNMRHTTLMV 325
                         +
Sbjct: 313 VKGTILIGALGLSYI 327


>gi|227822282|ref|YP_002826253.1| ribose ABC transporter, permease protein [Sinorhizobium fredii
           NGR234]
 gi|227341282|gb|ACP25500.1| ribose ABC transporter, permease protein [Sinorhizobium fredii
           NGR234]
          Length = 335

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/295 (14%), Positives = 97/295 (32%), Gaps = 22/295 (7%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             S   I ++  QI I ++ A G++ V+   G + L+     A  A     + +   LS+
Sbjct: 48  FLSPNNISNILTQITINLILAIGMTFVILIGG-IDLSVGSMLAFCAVVGGSVLTIPDLSV 106

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           +  + ++ + +   G + G  +      +   + ++   +          +T+ +     
Sbjct: 107 FQAVSLATVAAVGTGALCGFLNGWISAFWGLPSFIVTLGMLNIARGAALQVTDARTIYSF 166

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                              F +        +  V L    L A     L +T        
Sbjct: 167 PA----------------SFNAFGSQMIYGVPVVFLIALALVAVAWFVLSKTVFGRLLYG 210

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I +N++A      +++  K++AF ++   +G+A   + A  +  SP +    E   + ++
Sbjct: 211 IGNNEEAVRLAGHSLMTYKIAAFTIAGILVGIAAMVYMARLNIASPIIGIGFELNAIAAV 270

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           +I      GG  S+        I+  +           F   L       +    
Sbjct: 271 IIGGTSLSGGRGSVIGTLLGACIIGVLANGLILFGLSDFMRQLITGVVIILAVII 325


>gi|325264486|ref|ZP_08131216.1| ribose ABC transporter, permease protein [Clostridium sp. D5]
 gi|324030148|gb|EGB91433.1| ribose ABC transporter, permease protein [Clostridium sp. D5]
          Length = 330

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 88/307 (28%), Gaps = 32/307 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            + +S   +    +   +Y++ + G+S ++   G + L+      +    + I  +    
Sbjct: 35  PSFRSAANLTQTLLSASVYMLLSMGMSFII-ITGGIDLSLGAVVGLAGGLFCIFLTWKES 93

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            ++       ++ G     +    +        IATL    I++ IL             
Sbjct: 94  LLFA--IAGTILVGVVCGAVNGFMITKMELIPFIATLGGQWIYRGILKLLND-------- 143

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                         S               + +   +  +   +A +   L++T      
Sbjct: 144 ----GATITLRGAVSEKTVKAVDFIGNGRILGLPVPVYIVFLCAAGLTFLLKKTVFGRNI 199

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N +A       +   K   + +  A  G+AG            +  +  E   + 
Sbjct: 200 YAIGSNVEAARMSGINVDRVKFLTYMLGGALAGLAGMIMTCRMLSAQSNTGQNYEFEGIF 259

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           + V+      GG  S+       AI+  +                  +   +     ++ 
Sbjct: 260 AAVVGGVSMAGGEGSVIGALVGAAIVAVLRNGL------------NLNGINSFWQQVILG 307

Query: 326 IALFLVI 332
           + + LV+
Sbjct: 308 VLIVLVV 314


>gi|315645466|ref|ZP_07898590.1| inner-membrane translocator [Paenibacillus vortex V453]
 gi|315278944|gb|EFU42254.1| inner-membrane translocator [Paenibacillus vortex V453]
          Length = 331

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/315 (12%), Positives = 92/315 (29%), Gaps = 18/315 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   V  L+         +   I ++   I I  + A GL++ +   G   L+     +
Sbjct: 26  LITVFVLILVFGTVADNFLNTSNIINILRSISIVTIIAVGLTVSLAVGG-FDLSVGSTAS 84

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +     + +   +G +I + I ++ +   A G+I                 +        
Sbjct: 85  LANALVISMFVWHGQNIGIGIGLTLLFCLAVGLINAFLV------------INFKIDDML 132

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +    I  G A  Y           + S         +       + ++++ M  +  
Sbjct: 133 MTLATMFIFQGVALTYTRGATISQNMILPSGDFATGKIPAVFEKIGQVPWIIVIMVLVVI 192

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + L+L  T        I  N++A       +   +L+A+ VS+ F  + G    A    
Sbjct: 193 VVHLFLTYTKHGRYMYMIGGNREAAALSGIPVSKYRLAAYLVSALFAAIGGIILGARVMT 252

Query: 256 ISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
              +         V +      V   G  +         ++  +      ++  Y+   +
Sbjct: 253 AEVNSGGPYLMDAVAATFIGYSVFGAGKPNALGTFVGAVLIGILQNGLIMLSVPYYAMDI 312

Query: 311 KFDCSFNMRHTTLMV 325
                  +       
Sbjct: 313 VKGSVLALALALTYY 327


>gi|302337344|ref|YP_003802550.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
 gi|301634529|gb|ADK79956.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
          Length = 322

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 84/313 (26%), Gaps = 26/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++       LF+     ++ +   ++  Q+ I  + A G++ V+   G + ++     
Sbjct: 23  ISIILFSMIAFLFIASPTFRTVQNTINVLNQVSINGIIAIGMTFVIICAG-IDISVGSII 81

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ +     + +  G     ++                 +                    
Sbjct: 82  ALASVVVGAVLTHGGNCFLAVVLAVMACGLVGVFNGFFIAKY--------NMFPFVVTIA 133

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           + LI          G              +  +               + Y +L    ++
Sbjct: 134 SQLIIRGLAYVISNGKSYILTDPVFKQIGQGRLFGK------------IPYSILVFASVA 181

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L R            N+ A  +    +   KL+ + +     G+AG    +  +
Sbjct: 182 IICYFLLSRMKYGRYLYATGGNEHAAIASGVNVQLIKLATYTIMGICTGIAGVLLTSRVN 241

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P M    E   + + VI     +GG+ S+        I+  +      M    F   
Sbjct: 242 AGQPAMGVGYETDAIAASVIGGVSFMGGIGSVEGTVIGVLIIGLINNGMNLMGVSSFYQQ 301

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 302 IVKGFIILLTVMM 314


>gi|226359935|ref|YP_002777713.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226238420|dbj|BAH48768.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 352

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/283 (16%), Positives = 95/283 (33%), Gaps = 13/283 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
              A+   +   +     +S + + ++        + A  +++++   G   L+  +A  
Sbjct: 38  LFGAIAIFVFFMIVAPPFRSPEALATVLYASSTIGIMACAVALLM-IGGEFDLSAGVAVT 96

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             + +  ++     L++W    ++ ++S A G   G   +K +     I       +   
Sbjct: 97  TSSLAASMIAYNLHLNLWAGAALALVVSLAVGFFNGYLVMKTKIPSFLITLSSFLMLTGI 156

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L   K IT   A   V+D   F             F SSF I  + +   +L     +A
Sbjct: 157 NLAVTKLITGQVATPSVSDMQGFDSAK-------KVFASSFTIAGVSVRITVLWWLLFTA 209

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L +T I N    +  NQ +  ++   +   K+  F          G     S + 
Sbjct: 210 VATWVLFKTRIGNWIFAVGGNQDSARAIGVPVTKVKIGLFMTVGFAAWFVGMHLLFSFNT 269

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIG 293
           +       +E + +I+ VI      GG  +    A    I   
Sbjct: 270 VQSGQGIGNEFLYIIAAVIGGCLLTGGYGTAIGAAIGAFIFGM 312


>gi|237806829|ref|YP_002891269.1| inner-membrane translocator [Tolumonas auensis DSM 9187]
 gi|237499090|gb|ACQ91683.1| inner-membrane translocator [Tolumonas auensis DSM 9187]
          Length = 333

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 98/314 (31%), Gaps = 29/314 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++  +   L      ++  I ++  Q  I  + A G++ V+   G + L+     
Sbjct: 32  ILPVLILIFIGFSLMTPNFATESNIMNIVRQSSINTVLAAGMTFVI-ITGGIDLSVGSI- 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GA + + + +     + LL    A++ G     +    + + G    IATL      +
Sbjct: 90  -LGATAVMAMVTSLSPELGLLSIPVALMGGLLMGTLNGVMVAYIGLPPFIATLGTYTALR 148

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                          +     F      Y   + ++++    + 
Sbjct: 149 GAAYLLAD-------------------GTTVINNDISFEWIGNAYLGPIPWLVVIGFVVI 189

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 LR+T +      +  N  A       +       +A+S    G+ G   A+   
Sbjct: 190 GICWFILRKTTLGMHVYAVGGNANAARLTGIKVGLVLTFVYAMSGLMAGLGGIMSASRLY 249

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
             + +       +  I+ V+L      GG+ S++       I+  +      M   YF  
Sbjct: 250 SANGN-LGVGYELDAIAAVVLGGTSLSGGIGSITGTLIGALIIAAMNNGMTLMGVSYFWQ 308

Query: 309 LLKFDCSFNMRHTT 322
           L+   C   +    
Sbjct: 309 LVIKGCVIIIAVLI 322


>gi|325261751|ref|ZP_08128489.1| ribose ABC transporter, permease protein [Clostridium sp. D5]
 gi|324033205|gb|EGB94482.1| ribose ABC transporter, permease protein [Clostridium sp. D5]
          Length = 313

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/297 (10%), Positives = 83/297 (27%), Gaps = 27/297 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
            + +L  + ++  ++  +      S   I ++  Q     + A G+++V+   G + L+ 
Sbjct: 13  RELLLVGVVIILCIIWTIMNSQFLSANNISNILRQASYTAIAAVGMTMVIII-GEIDLSA 71

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                       ++        + +I  +A+  GA    +             IA+L   
Sbjct: 72  GSLVCAAGLVGAVVCKNTDNVFFSVI--AAIAVGAVIGTVNGVLCAIGKLPGFIASLASM 129

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            + + +                             +     F      Y + +   ++ M
Sbjct: 130 TVLRGLAYIVTGGN-------------------SVVWSNENFTMIGTGYIVGIPVPVIIM 170

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +    ++   +T       ++  N +A       +   K+  + +      +AG    
Sbjct: 171 VIIIIFGVILTSKTRFGRYIYSVGGNMEASRWSGIAVEKVKILVYMIMGVLTAIAGLIIT 230

Query: 251 ASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
                  P      E   + + V+      GG   +        +L  +      + 
Sbjct: 231 TRLGSGQPSAGLNFEMDCITAAVVGGTSMSGGRGKVMGTIVGVLLLTVLTNGMTLVG 287


>gi|239982104|ref|ZP_04704628.1| putative sugar uptake ABC transporter permease protein
           [Streptomyces albus J1074]
 gi|291453952|ref|ZP_06593342.1| ribose/xylose/arabinose/galactoside ABC transporter permease
           [Streptomyces albus J1074]
 gi|291356901|gb|EFE83803.1| ribose/xylose/arabinose/galactoside ABC transporter permease
           [Streptomyces albus J1074]
          Length = 356

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 85/294 (28%), Gaps = 26/294 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + +   L+  L   +  S      + +Q     + A G+++V+   G + L+    +
Sbjct: 53  VLAVLLAVILVASLLYPSFASLDNARGVTVQASFLAIVALGMTLVI-ITGGIDLSVGSVF 111

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+G            L   L+  +     G                        +     
Sbjct: 112 ALGGVLAAWASQWGLLPALLVPLLVCGAIGLVN--------------------GLLIGRA 151

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +        +       G T   + +   F              LL    L 
Sbjct: 152 GLAPFIVTLATLLGARGLLLAFTDEGATTYLVPKGSAFAWLGGGTVWGFGIPLLIALALF 211

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L+RT+       +  +  A   +   +   K+  + +S    G+AGA  AA   
Sbjct: 212 GLGGLLLQRTSFGQGLFAVGGSSDAATLMGLPVARTKVLVYTLSGLLAGLAGALNAARLT 271

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
                +    E   + ++VI     +GG  S+S       +L  +  L   +  
Sbjct: 272 SGVTILGVGMELDAISAVVIGGTLLIGGAGSVSGTLWGVLLLAVIQNLINQIGS 325


>gi|239625490|ref|ZP_04668521.1| monosaccharide-transporting ATPase [Clostridiales bacterium
           1_7_47_FAA]
 gi|239519720|gb|EEQ59586.1| monosaccharide-transporting ATPase [Clostridiales bacterium
           1_7_47FAA]
          Length = 324

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 88/300 (29%), Gaps = 25/300 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             + +  L ++ V   ++  +      S   I ++  Q  I  + A   ++++ + G + 
Sbjct: 16  FQQTEFTLGVIIVALFVITSVCTDNFFSVYNITNLMKQCAIIGVLAVAQTMII-TTGGID 74

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++      +      +L    G++ +L + ++ M + A G   G+    F+   +     
Sbjct: 75  ISGGAITGLSCMVLALLQRDTGMNFYLTLLIAVMFAIAAGFANGIIVYDFKVPPMIATL- 133

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                             G + I              S +           +   +  + 
Sbjct: 134 ------------------GMSTIIRGIIKIISKALTVSGLDERILNMGNNSFFGLLPALA 175

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +    ++  + L LR T        I    +        +     S +A +    G+AG 
Sbjct: 176 IIWAVVALVVFLILRYTVFGRNLYVIGSGVEVAKLSGIKVRKMFYSVYAFAGLLYGIAGI 235

Query: 248 FFAASRDRI-----SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
             AA                     ++    + GG  ++S     T +++ +        
Sbjct: 236 MLAARVQSALPTGGEGYDMNAIAAAVIGGASLSGGRGAVSGTLLGTILMVLINNAGVQFG 295


>gi|146293153|ref|YP_001183577.1| inner-membrane translocator [Shewanella putrefaciens CN-32]
 gi|145564843|gb|ABP75778.1| inner-membrane translocator [Shewanella putrefaciens CN-32]
          Length = 372

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/295 (12%), Positives = 87/295 (29%), Gaps = 26/295 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +  +  +     + A G+S+V+   G + L+     AI       L     + +  ++  
Sbjct: 77  LIDILNRSAPVALLAIGMSLVIA-TGGIDLSVGAVMAIAGAVCANLLLLPDIGLGTVVLA 135

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++    G I G          +    L+M        +  +                 
Sbjct: 136 GLVVGLMAGCINGTLVSFLGIQPIVATLLLMVAGRGVAQLINQG---------------- 179

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                    +   F +  V   + +   +  +  +     L LR+TA+      +  N K
Sbjct: 180 ----QIVTFQHQGFAAIGVGQFLGLPMPIWIVIGMLILTQLLLRKTALGLFIEAVGCNAK 235

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L       KL A+A++     +AG    A       +       +  I  V++GG 
Sbjct: 236 ASRYLGINDKSIKLFAYAIAGLCAALAGMISTADIQGSDANNAGLWLELDAILAVVIGGA 295

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
                        + +  +   +      +++              ++ L +++L
Sbjct: 296 -----ALTGGRFSLFLSIIGALIIQTLATTIIVSGLPAKFNLLIKAIVILTVLLL 345


>gi|158317413|ref|YP_001509921.1| inner-membrane translocator [Frankia sp. EAN1pec]
 gi|158112818|gb|ABW15015.1| inner-membrane translocator [Frankia sp. EAN1pec]
          Length = 741

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 55/338 (16%), Positives = 100/338 (29%), Gaps = 48/338 (14%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            + D +  L      L    F  A     ++           +    L I+ G  G LSL
Sbjct: 323 ARRDILGKLGGAALLLAPLTFAPADLRSAFMVPAL------ALIFLSLVILTGYSGQLSL 376

Query: 69  NCVIAYAIGA-----YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
                  +GA      +   L     +     + + A++    G+I G P+++ RG  LA
Sbjct: 377 GVAGYAGLGALLTLKLANGDLFGIPAIPGMWAMFLGALLVAPIGLITGWPAIRRRGLTLA 436

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           + T  +  +    + +      G                   L           + +   
Sbjct: 437 LTTFAVGAVVSRFVFEQPTFATG-------------------LYVDPLTFFGSELTDEAF 477

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           Y   L    +   ++  L    +  A   +RD+ +   ++   +   KL AF VSS   G
Sbjct: 478 YIFELVCLAIGLLVVRNLHHGRLGRALLAVRDHTEGAAAVGVDVRNLKLLAFTVSSVVAG 537

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNF 303
           + G     S    S D F   ++++  + VI+ G                          
Sbjct: 538 LGGGLLTFSSSSFSADDFAPLQSLLWFTAVIVFGA------------------DSAAGAI 579

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                ++  D       + L V  L L +      L  
Sbjct: 580 IAAAFIVTIDVLAPAGSSILAVGILALALGWMPGGLAS 617



 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/273 (12%), Positives = 76/273 (27%), Gaps = 8/273 (2%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            I  +   GL +   + G+L+L       + AY +  +   + L IWL    + +  G  
Sbjct: 15  AIAALSGIGLLVTYRTNGVLNLAQGGIATLVAYVFREMVVEWDLPIWLA---AVIALGIL 71

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
              +GL   +     LA      +E     L          AGI+         +   + 
Sbjct: 72  SPGIGLLLERLVFRPLARRRASAAESLVASLGVLVLTLGMTAGIWGLGSRSDAPSIFPNE 131

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                         +     L  +      + L   +T      R + D+++        
Sbjct: 132 SVT---IFGDTRIGVDALAELAMVVAFCIVLGLIAAKTKFGRQIRAVVDDRQLAELSGVP 188

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
                 + +A+ +   G+ G   A         +      +   ++V+   ++S+     
Sbjct: 189 ADRVAAAGWALGTTMAGLTGILLAPRFQLNPYGLT--LLVLETFAVVVAARLSSMPVAVL 246

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
               +  +               +      N+ 
Sbjct: 247 TALGIAVLQSELKQFTLEGDAGQILIVLQSNLF 279


>gi|303251689|ref|ZP_07337860.1| xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307248987|ref|ZP_07530995.1| Xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|302649119|gb|EFL79304.1| xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306854445|gb|EFM86640.1| Xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 375

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/357 (13%), Positives = 99/357 (27%), Gaps = 47/357 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L  + V+         GA  S + I ++  Q  I  + A G+  V+ S   + L+  
Sbjct: 12  YIMLIAIVVIMSFFSVATDGAYLSARNISNLLRQTSITGILAIGMVFVIISA-EIDLSVG 70

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI------- 124
               +      I    +G  + L I V+ ++    G   G      +     +       
Sbjct: 71  SLMGLLGGFAAIADVWWGWPLPLTIAVTLVLGTLLGAWNGWWVSYRKVPSFIVTLAGMLA 130

Query: 125 ----------------------------------ATLIMSEIFQNILIKWKPITNGKAGI 150
                                               L +  +F  +          K   
Sbjct: 131 FRGILIGLTNGTTVSPISNDMTAIGQGYIPDVTGMILGLVAVFSFVTWGTYQRKARKNLN 190

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                                     +     + + +L +  L+   +   R+TA     
Sbjct: 191 LNVPDATKDIMKYGLFAICVLGAIYLLNDYRGIPFPVLVLAILTVVGMFIARKTAFGRHI 250

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N +A       +   KL+ FA++   + +AG   +A     +P   + +E   + 
Sbjct: 251 YAIGGNIEAARLSGINVEKVKLTIFAINGFMVAIAGLILSARLGAGAPSAGQNAELDAIA 310

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + VI      GG+ S+  +     I+  +      ++   F   +       +    
Sbjct: 311 ACVIGGVSLAGGIGSVYGVIIGAFIIALLDNGMSMLDVPTFWQYIVKGAILLLAVWV 367


>gi|296139084|ref|YP_003646327.1| inner-membrane translocator [Tsukamurella paurometabola DSM 20162]
 gi|296027218|gb|ADG77988.1| inner-membrane translocator [Tsukamurella paurometabola DSM 20162]
          Length = 352

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/294 (13%), Positives = 95/294 (32%), Gaps = 13/294 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             + A+   +   +     +S +   ++        + A G+++++   G   L+  +A 
Sbjct: 37  ALIGAIAIFVFFLVVAPPFRSPEAFATVLYASSTIGIMACGVAVLM-IGGEFDLSTGVAV 95

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              + +  +L     L+ W+   ++  +S A G+  G   ++ +     + TL    +  
Sbjct: 96  TFSSLAASMLAYNLHLNTWVGSLLALALSLAVGLFNGYMVMRTKIPSF-LITLASFLMIT 154

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I +    +  G+        +    +               V   +F + +       +
Sbjct: 155 GINLAVTKLVTGQVATPTVADMQGFESARSLFASTISVFGVNVKITVFWWLLF------T 208

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     L RT + N    +  NQ +  ++   +   K+  F          G     + D
Sbjct: 209 AVATYVLMRTRVGNWIFAVGGNQDSARAVGVPVTKVKIGMFMFVGLCAWFVGQHLLYAFD 268

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            +       +E + +I+ VI      GG  +    A    I   V +      +
Sbjct: 269 TVQSGQGVGNEFLYIIAAVIGGCLLTGGYGTAVGAAVGAFIFGMVNQGIVYAGW 322


>gi|170693486|ref|ZP_02884645.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
 gi|170141641|gb|EDT09810.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
          Length = 335

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/278 (11%), Positives = 73/278 (26%), Gaps = 27/278 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V  +++     +  S   I+++  Q+ I  + A G++ V+   G + L+     A
Sbjct: 40  FVGLLVVCIVMVFASDSFLSGANIENVLRQVSINAIIAVGMTCVI-LTGGIDLSVGSVMA 98

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +                        + +G     M   +    G  + +     +  F  
Sbjct: 99  LSG---------------------TLAAGLMVAGMNAVAALAVGVAVGLGFGAANGFFVA 137

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  I                                     + +   ++ M  +  
Sbjct: 138 FAGMPPIIVTLATMGIARGLALIYTGGYPIDGLPEWVSFFGSGKILGIQAPVVIMAVIYV 197

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              + L R         I  N++A       +   KL  + ++      A     A    
Sbjct: 198 IAWVLLERMPFGRYVYAIGGNEQATRLSGVRVARVKLIVYTIAGLTSSFAAIVLTARLMS 257

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKAT 288
             P+     E   + ++V     I GG  S+       
Sbjct: 258 GQPNAGVGFELDAIAAVVMGGTSISGGRGSIIGTLIGA 295


>gi|297567230|ref|YP_003686202.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
 gi|296851679|gb|ADH64694.1| inner-membrane translocator [Meiothermus silvanus DSM 9946]
          Length = 317

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 90/297 (30%), Gaps = 27/297 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  +    +L     +  S      + + I    + A G+ +V+   G + ++     
Sbjct: 11  IAVFLLALAGVLLAASPSFFSLGNFKDILVNISYVAIAAVGMMMVI-LTGQIDISVGATL 69

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           +I +               + +      +    +   L +      +  I TL    IF+
Sbjct: 70  SICSTLAATASKSGLPLGVVFLISIGAGAALGLVNGLLVTRF--KIHSIIVTLGTLSIFR 127

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             LI                   +             F    +   + + Y +  M  + 
Sbjct: 128 GALI-------------------YFTKGAWIYQLPEDFRRVGLGTFLGIPYPIWAMAVVL 168

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    L  T    A   +  N +A       + F + S F V  A +G+A  F+A    
Sbjct: 169 LAGAWVLSATPWGRALYAVGSNPEAARLSGIRVPFVQASVFVVCGALVGLATMFYATRFS 228

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
            I  +  +  E +++ ++V+      GG  ++  +     ++         +    +
Sbjct: 229 TIQSNTGQGFEFLVITAVVVGGTNIFGGAGTVLGVTLGALLVGVTGTALTFLKISAY 285


>gi|222082009|ref|YP_002541374.1| sugar ABC transporter [Agrobacterium radiobacter K84]
 gi|221726688|gb|ACM29777.1| sugar ABC transporter [Agrobacterium radiobacter K84]
          Length = 373

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 80/304 (26%), Gaps = 20/304 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L +V             S   + ++        + A   ++++   G   L+     
Sbjct: 36  VAGLVLVIVFFFLTADRTMFSLSGLMTIMAPASQLGILAIAAALLM-IGGEFDLSIGSMV 94

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A     + ++ + +G  + + I ++ + +   G I G   +  R     +    +  +  
Sbjct: 95  AFAGLIFGVILTNFGQPLSVAIVMTMLFAAFMGAINGQIVIHTRLPSFIVTLAFLFILRG 154

Query: 135 NILIKWKPITNGKAGIYVADR--------------LYFLGTTVRSLIRFFRFPSSFVIYE 180
             L+  K  T G   +                            +         + +   
Sbjct: 155 LTLVGLKWATGGSTQLRGIGDHVKDSPLLGLFSGDALKGTFIWLADHDLIDKFPNGMPKV 214

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             +   +L    ++ +    L RT   N       +  A  +    +   K   FA+++ 
Sbjct: 215 TGIPVSVLWFAAVALAATWVLLRTRTGNWIFAAGGDPNAARNSGVPVHRVKTGLFALTAC 274

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVV 295
              +                    E   +I+ VI      GG  S         I   V 
Sbjct: 275 AAALVAIITVLDAGSTDARRGFQKEFEAIIAAVIGGCLLTGGYGSAIGAFFGAIIFGSVS 334

Query: 296 ELCC 299
               
Sbjct: 335 IGLT 338


>gi|315427791|dbj|BAJ49385.1| branched-chain amino acid ABC transporter, permease [Candidatus
           Caldiarchaeum subterraneum]
          Length = 288

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 96/287 (33%), Gaps = 15/287 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
           G    +  + + G +++ G + + ++     +  GAY   +L S       L   +SA+I
Sbjct: 15  GTLGGVLALLSSGFTMIFGVVRMFNMAHGAYFVTGAYVTYLLTSALSADPTLSTALSAVI 74

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
            G  G ++    L  R        +I++     I  +   I  G+ G+ V      + T 
Sbjct: 75  VGLVGGVIYRALLS-RVKSHESTVIIITLALALIFEQLLLIRFGEHGVNVKTIASGVVTV 133

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +             V         L         +  ++ +T +         + +A   
Sbjct: 134 M------------GVPLPTMRLLALGVSLITLLLLGFFVAKTRVGKQIVAASQDLEAATI 181

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +      +  VSSA  G+ GA +A         +  F   +   +IVI GG+ S+ 
Sbjct: 182 IGLRVERLFFVSVLVSSALAGLGGALYAQVYGVTPFLV--FRVLVFAFAIVIFGGLGSVK 239

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
               A+ ++  V+ L        ++ L+       +       +   
Sbjct: 240 GSIVASFVIGYVIVLTTMFIGARWSDLVVLLVIVAILLLRPYGLFGV 286


>gi|261822245|ref|YP_003260351.1| inner-membrane translocator [Pectobacterium wasabiae WPP163]
 gi|261606258|gb|ACX88744.1| inner-membrane translocator [Pectobacterium wasabiae WPP163]
          Length = 343

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/314 (13%), Positives = 105/314 (33%), Gaps = 11/314 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  +          S++ I ++  ++ IY + A G++ V+ + G + L+     
Sbjct: 30  VFIFMILLLIFFQSQNSNFLSERNITNILTEVSIYGIMAVGMTFVILTAG-IDLSVGSIL 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +        G +   + P +         +    ++     +L    +    +  
Sbjct: 89  AVCAITAA--SVIKGDNFTTVDPDAWYGLSWLVALGVCLAMGTFIGFLHGLGVTKLRLPP 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+        G         +   G  +      +R+     I  I +   +  +  L 
Sbjct: 147 FIVT-----LGGMTIWRGLTLVMNDGAPIAGFDPGYRWWGRGEILGISVPIWIFALVALL 201

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + L   +T        I  N +A       +    +S + V     G+AG   +A   
Sbjct: 202 GYLAL--HKTRWGRFVYAIGGNTEAARLAGVNVQRVLVSVYVVIGCLAGLAGFILSARLG 259

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                    +  + VI+ V++GG + +    + +  +IG + +   +N     ++  +  
Sbjct: 260 SAEAVA-GITFELRVIASVVIGGTSLMGGYGRISGTIIGSIIMGILINGLVLMNVSAYYQ 318

Query: 315 SFNMRHTTLMVIAL 328
                   ++ +A 
Sbjct: 319 QIITGLIIVLAVAF 332


>gi|229895231|ref|ZP_04510405.1| Ribose ABC transport system, permease protein RbsC [Yersinia pestis
           Pestoides A]
 gi|229701717|gb|EEO89742.1| Ribose ABC transport system, permease protein RbsC [Yersinia pestis
           Pestoides A]
          Length = 297

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 86/263 (32%), Gaps = 23/263 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  VV  +L+     +  +   + ++  Q+ I  + A G++  +   G + L+     A
Sbjct: 35  FIGFVVLFVLMSGLNDSFLTVNNLTNVARQVSINAIIAVGMTCAI-LTGGIDLSVGPVMA 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L         L +  + ++    G+  G      R   +   TL    I + 
Sbjct: 94  LSGSIAAGLMLAGIPIP-LAMMAALLVGALFGLANGSCIAYLRMPPII-VTLASMGIARG 151

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 LY  G  +  L   F F     +  I +  +++   +L A
Sbjct: 152 LAL-----------------LYTGGYPISGLPDMFSFFGRGTVLGIQVPILIMAGVYLFA 194

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            I+L     +       I  N++A       +   K+  + VS     +AG    +    
Sbjct: 195 WIMLNHL--SFGRYIYAIGGNEEAARLSGIRVSRYKMLVYVVSGLTAALAGLVLTSRLMS 252

Query: 256 ISPDMFKFSENIIVISIVILGGM 278
                      +  I+ V+LGG 
Sbjct: 253 -GQPNAGEGFELDAIAAVVLGGA 274


>gi|53719612|ref|YP_108598.1| putative branched amino acid transport system, membrane protein
           [Burkholderia pseudomallei K96243]
 gi|76808628|ref|YP_333226.1| putative branched amino acid transport system, membrane protein
           [Burkholderia pseudomallei 1710b]
 gi|134282832|ref|ZP_01769535.1| ABC transporter, permease protein [Burkholderia pseudomallei 305]
 gi|167903034|ref|ZP_02490239.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia pseudomallei NCTC 13177]
 gi|226192961|ref|ZP_03788573.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|237811954|ref|YP_002896405.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
 gi|254180059|ref|ZP_04886658.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655]
 gi|254188532|ref|ZP_04895043.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254257970|ref|ZP_04949024.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a]
 gi|52210026|emb|CAH35999.1| putative branched amino acid transport system, membrane protein
           [Burkholderia pseudomallei K96243]
 gi|76578081|gb|ABA47556.1| putative branched amino acid transport system, membrane protein
           [Burkholderia pseudomallei 1710b]
 gi|134245918|gb|EBA46009.1| ABC transporter, permease protein [Burkholderia pseudomallei 305]
 gi|157936211|gb|EDO91881.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|184210599|gb|EDU07642.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655]
 gi|225935051|gb|EEH31026.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|237503605|gb|ACQ95923.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
 gi|254216659|gb|EET06043.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a]
          Length = 311

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 104/314 (33%), Gaps = 22/314 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M   GL+++ G LG+L+      Y +GAY+   + +R    + L+   
Sbjct: 8   LLNGLSYGLLLFMLCAGLTLIFGMLGVLNFAHASFYMLGAYAGYAIAARTSFWVALVAAP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+ +        L        +L    L     +               G+ +   L  
Sbjct: 68  LAVGALGALCERTLLRRVRASGHLDELLLTFGLAYLI-----------AEGVKLVWGLAP 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   V + +    F     ++  +  +++L    +  ++   LR +      R     + 
Sbjct: 117 LAAPVPAALDGAAFTVYGAVFSRYRAFMMLVSIAMLGALWAVLRASRTGLVVRAALTRRA 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  +L   +       FA  +A   +AG   A     +       +   +V +++++GG+
Sbjct: 177 AVEALGHDVPRVMTLVFAAGTALAALAGVIGAPLA--VIEPAMAQTLGSVVFAVIVIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT---------TLMVIALF 329
            SL+    A+ +L               ++      +                +  + L 
Sbjct: 235 GSLAGALVASLVLGCAQTFAAASRASLSDAAQWAGIALPDAWRALTLAQFAPLIPYLLLI 294

Query: 330 LVILMRSHSLLRLR 343
           +V+  R+  L   R
Sbjct: 295 VVLACRARGLFGER 308


>gi|327194371|gb|EGE61231.1| putative sugar ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 373

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 81/304 (26%), Gaps = 20/304 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L +V             S   + ++        + A   ++++   G   L+     
Sbjct: 36  VAGLVLVIVFFFLTADSTMFSLSGLMTIMAPASQLGILAIAAALLM-IGGEFDLSIGSMV 94

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A     + ++ + +G  + + I ++ + +   G I G   +  R     +    +  +  
Sbjct: 95  AFAGLIFGVILTNFGQPLSVAIVMTMLFAAFMGAINGQIVIHTRLPSFIVTLAFLFILRG 154

Query: 135 NILIKWKPITNGKAGIYVADR--------------LYFLGTTVRSLIRFFRFPSSFVIYE 180
             L+  K  T G   +                            +         + +   
Sbjct: 155 LTLVGLKWATGGSTQLRGIGDHVKDSPLLGLFSGDALKGLFVWLADHDLIDKFPNGLPKV 214

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             +   +L    L+ +    L RT + N       +  A  +    +   K   FA+++ 
Sbjct: 215 TGIPVSVLWFVVLALAATWVLLRTRMGNWIFAAGGDPNAARNSGVPVHRVKTGLFALTAC 274

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVV 295
              +                    E   +I+ VI      GG  S         I   V 
Sbjct: 275 AAALVAIITVLDAGSTDARRGFQKEFEAIIAAVIGGCLLTGGYGSAIGAFFGAIIFGSVS 334

Query: 296 ELCC 299
               
Sbjct: 335 IGLT 338


>gi|307246849|ref|ZP_07528914.1| Xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307255831|ref|ZP_07537632.1| Xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307260284|ref|ZP_07541991.1| Xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306852134|gb|EFM84374.1| Xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306861099|gb|EFM93092.1| Xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306865535|gb|EFM97416.1| Xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 375

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/357 (13%), Positives = 98/357 (27%), Gaps = 47/357 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L  + V+         GA  S + I ++  Q  I  + A G+  V+ S   + L+  
Sbjct: 12  YIMLIAIVVIMSFFSVATDGAYLSARNISNLLRQTSITGILAIGMVFVIISA-EIDLSVG 70

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI------- 124
               +      I    +G  + L I V+ ++    G   G      +     +       
Sbjct: 71  SLMGLLGGFAAIADVWWGWPLPLTIVVTLVLGTLLGAWNGWWVSYRKVPSFIVTLAGMLA 130

Query: 125 ----------------------------------ATLIMSEIFQNILIKWKPITNGKAGI 150
                                               L +  +F  +          K   
Sbjct: 131 FRGILIGLTNGTTVSPISNDMTAIGQGYIPDVTGMILGLVAVFCFVTWGTYQRKARKNLN 190

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                                     +     + + +L +  L+   +   R+TA     
Sbjct: 191 LNVPDATKDIMKYGLFAICVLGAIYLLNDYRGIPFPVLVLAILTVFGMFIARKTAFGRHI 250

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N  A       +   KL+ FA++   + +AG   +A     +P   + +E   + 
Sbjct: 251 YAIGGNIDAARLSGINVEKVKLTIFAMNGFMVAIAGLILSARLGAGAPSAGQNAELDAIA 310

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + VI      GG+ S+  +     I+  +      ++   F   +       +    
Sbjct: 311 ACVIGGVSLAGGIGSVYGVIIGAFIIALLDNGMSMLDVPTFWQYIVKGAILLLAVWV 367


>gi|239617003|ref|YP_002940325.1| inner-membrane translocator [Kosmotoga olearia TBF 19.5.1]
 gi|239505834|gb|ACR79321.1| inner-membrane translocator [Kosmotoga olearia TBF 19.5.1]
          Length = 309

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/317 (12%), Positives = 99/317 (31%), Gaps = 30/317 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
               + +  +   +L  +      +     ++  QI I  + A+G++ V+   G + L+ 
Sbjct: 10  RKFPIIVGFLGIVILFSILSDRFLTLSNFLNVLRQISINAIMAFGMTFVI-LSGGIDLSV 68

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
              +A+ A     +     +   +L  +    +        +  +K +   + ++T+ ++
Sbjct: 69  GSVFALSAVVGASILKGGSILWGVLAALGVGAAMGTFNGFIIARMKLQPFIVTLSTMAIA 128

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             F  +  + +PIT   A      R  +L   +                       +  M
Sbjct: 129 RSFTQVYTQGRPITGLPAAFREFGRGEWLQVPIP----------------------IYIM 166

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +  +    L  T +     +I  N++A       +   K+  + +S     ++     
Sbjct: 167 AGVFVAGFYILTNTKLGLYTYSIGGNEEATRLSGVKVDRYKVIIYMISGLLSALSALILT 226

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFY 304
           A  +   P  F     +  I+ V+LGG        S+        ++  +      +N  
Sbjct: 227 ARLNSAQPI-FGMGYELDAIAAVVLGGTSLSGGKGSIIGTLFGALVMGIINNGMNLVNVS 285

Query: 305 YFNSLLKFDCSFNMRHT 321
            F           +   
Sbjct: 286 PFYQQAVKGAVILLAVM 302


>gi|123440896|ref|YP_001004887.1| putative ABC transporter permease protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122087857|emb|CAL10645.1| putative ABC transporter permease protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 329

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 87/291 (29%), Gaps = 31/291 (10%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             + +    +     I ++ A G ++V+     + ++      + A +  +     G  +
Sbjct: 6   YFNLQTFTMIFSSAQILILLAIGATMVM-LTRNIDVSVGSITGLCAVTVGM-ALNAGFGL 63

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA--TLIMSEIFQNILIKWKPITNGKAGI 150
            L    + ++    G   G+     R   +     TL +      +L   K I    A  
Sbjct: 64  ALSCLFALLVGMGAGFFNGILVTWLRIPAIVATLGTLGLYRGLMLLLTGGKWIEGLPA-- 121

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                                  S        +  +   +  L  ++ L L +TA   ++
Sbjct: 122 --------------------DLKSLSTPILFSISPIGWLIMLLIVAMALLLGKTAFGRSF 161

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
               DN +    L       ++ AF+++     +AG  FA+    I        E   + 
Sbjct: 162 YATGDNLQGARQLGIRTDSIRIFAFSMNGVMAALAGIVFASQIGFIPNQTGSGLEMKAIA 221

Query: 271 SIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           + V     +LGG  ++        +L  +  +   +    + +        
Sbjct: 222 ACVLGGISLLGGTGTIIGAILGAYLLTQIDSVLVLLRLPAWWNDFIAGLVL 272


>gi|157368350|ref|YP_001476339.1| monosaccharide-transporting ATPase [Serratia proteamaculans 568]
 gi|157320114|gb|ABV39211.1| Monosaccharide-transporting ATPase [Serratia proteamaculans 568]
          Length = 394

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 53/355 (14%), Positives = 106/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  + V+     F   GA  S + I ++  Q  I  + A G+  V+     + L+    
Sbjct: 33  MLAAIVVIMLFFTFTTEGAYLSARNISNLLRQTAITGILAVGMVFVI-VSAEIDLSVGSM 91

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +   +  I     G  + L I V+ +     G   G      +               
Sbjct: 92  MGLLGGAAAIFDVWLGWPLPLTIVVTLLAGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 151

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+ +     +   + R+ +   
Sbjct: 152 GILIGITNGTTVAPTSGAMSQIGQSYLPNGLGFGIGAVGLMLFVAWQWRRRSRRAQLGLP 211

Query: 171 RFPSSFVIYEIFMYYV------------------LLGMCFLSASIILWLRRTAISNAWRT 212
              +   +    +  +                  +L +  L  + I    RTA       
Sbjct: 212 VATAGGDVTRQSILALLVLGAIYLLNDYRGVPTPVLILTALMLAGIFMATRTAFGRRIYA 271

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N  A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 272 IGGNIDAARLSGVNVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 331

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 332 VIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGAILLLAVWM 386


>gi|114328151|ref|YP_745308.1| branched-chain amino acid transport system permease livH
           [Granulibacter bethesdensis CGDNIH1]
 gi|114316325|gb|ABI62385.1| branched-chain amino acid transport system permease protein livH
           [Granulibacter bethesdensis CGDNIH1]
          Length = 293

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 90/303 (29%), Gaps = 24/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+L+          A +YV L  R       ++  
Sbjct: 8   LTGGLLSGVMYALVALGFVLIYKASGVLNFAQGSMLLFAALTYVSLVERGLPVWLAVLVT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +      I         G    +  +    +   I    + +               
Sbjct: 68  LLALILLGSAIERFVLRPLIGRPSIVLFMATLGVSYFIEGASQLVWGS------------ 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         V+              L   + L+ + T    A+R + D+Q+
Sbjct: 116 DVHALSLGISDSPVSLGGVLVSRLDLVAAAVAGVLVTVLALFFQYTPAGLAFRAVADDQR 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +       +AV+     +AG  + A               +  + +++LGG 
Sbjct: 176 AALAIGLRLTRIWALVWAVAGGVALVAGLLWGARLGVQFSLS---LVVLRALPVLVLGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++    +L          + ++   +          +   +V+L+R + 
Sbjct: 233 GSIPGAIAGGLLIGAAEKLAQVYLGDVLGNGIESWFA---------YVLALVVLLIRPNG 283

Query: 339 LLR 341
           L  
Sbjct: 284 LFG 286


>gi|121610214|ref|YP_998021.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121554854|gb|ABM59003.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 330

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 86/289 (29%), Gaps = 19/289 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL-LSLNCVIAY 74
            +  V+  +   L      +   + ++        + A G+  V+ S G+ LS+  + A 
Sbjct: 25  VIGLVLLCIAGMLLHENFATYDNLMNVLKNTSFIGIIAVGMCFVIISGGIDLSVGSMAAL 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
             G     +        +   + +  +++   G + GL              ++      
Sbjct: 85  IAGVVILSMNAMAPSFGMLTAVVIGMLLAVLLGALFGLVHGLLISKGRIEPFIVTLGTLG 144

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                    +NG A     D     G    + +     P    +    +  V+L      
Sbjct: 145 IFRAYLTYFSNGGAITLDNDLSDIYGPVYYADLAGVPIPVLVFLLVALLGGVIL------ 198

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                   RTA     + I  N++        +   K+  + +    +G+A   +     
Sbjct: 199 -------NRTAYGRYVQAIGSNEQVAQYAAVDVHRIKILTYMLLGICVGIATLLYVPRLG 251

Query: 255 RISPDMFKFSENIIVISIVILG-----GMTSLSKIAKATAILIGVVELC 298
             SP      E   + ++++ G     G  S++       +L  +  + 
Sbjct: 252 SASPTTGLLWELEAIAAVIVGGTVLKGGAGSITGTVVGAVLLSVIGNIL 300


>gi|306841223|ref|ZP_07473938.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO2]
 gi|306288745|gb|EFM60067.1| branched-chain amino acid ABC transporter, permease protein
           [Brucella sp. BO2]
          Length = 228

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 55/173 (31%), Gaps = 15/173 (8%)

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                        +YY+ L     S  ++  L  T        +R+N      L   +  
Sbjct: 15  MPAWGFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTVGLRENTHRLRFLGYNVHV 74

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
                FA+S+ F G+AGA  A + +  +  +F+   +  V+    +GG+ +    A   A
Sbjct: 75  LGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVLNSFIGGVGTFFGPAIGAA 134

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +     +   +   +                    +   LV++     L+  
Sbjct: 135 AMTFFGHVTSDVTRSW---------------LLYQGLIFVLVMMFLPRGLVGE 172


>gi|331694389|ref|YP_004330628.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326949078|gb|AEA22775.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 287

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 91/306 (29%), Gaps = 30/306 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I    +Q  +Y +   G+++  G   +L+        +GAY++V+     G  + L + +
Sbjct: 8   ILLGIMQGGLYTLVGLGVTLTFGVTHILNFAHGEFITVGAYAFVLFAGALGAGLALPLAL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                 A  +         R     +  L  S         +              R + 
Sbjct: 68  LVAGGVAAIL---YVVGFRRTIGNHLQGLAFSLGLLLFAEAFFV------------RTFT 112

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I             +    V+     +       +RRT I  A R   D++ 
Sbjct: 113 ATPRSGPRIEGTVSLIGEEQLPVGRLVVIGVTIVVVVVTAFAMRRTWIGLALRACGDDEF 172

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++        L AF V+ A   +AG   A            F     V++  I+GG+
Sbjct: 173 AASTVGLPARRVGLYAFVVAGALAAVAGICIALVVPITPATGLSFLLKGFVVA--IIGGL 230

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  +L  +  L          +   F             + + +++L+    
Sbjct: 231 GSIEGTFVAAMMLGLLEALGTRYVEAGLTNAYGF-------------VLMIVILLVAPAG 277

Query: 339 LLRLRT 344
           L   R 
Sbjct: 278 LFNRRQ 283


>gi|149916486|ref|ZP_01905003.1| inner-membrane translocator [Roseobacter sp. AzwK-3b]
 gi|149809588|gb|EDM69444.1| inner-membrane translocator [Roseobacter sp. AzwK-3b]
          Length = 269

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 88/263 (33%), Gaps = 36/263 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKS------QKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           K   +L L+A++  L  F+      S            +  + +I+ +FA G +I+ G  
Sbjct: 7   KDTSLLILVAILTMLAPFILNPFPASSGMAQFNAGYPDLMQRFVIFGIFAIGFNILFGLT 66

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G LS        +G+Y+ + +    G+++   + +S ++SG   +++G  SL+  G Y +
Sbjct: 67  GYLSFGHAAFIGVGSYAAMWMFKLVGMNVLPALALSIVMSGLFAVVIGYVSLRRSGIYFS 126

Query: 124 IATLIMSEIFQNILIKWKPITN------------------------------GKAGIYVA 153
           I TL  + +   +                                       G+      
Sbjct: 127 ILTLAFAMMSYALAYSVLATDMDGPDKQGLLQKGLTGGETGLQLTLQDPRILGQQSTVDG 186

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
           +        +            +V      YY    +  L+  + + + R+      R I
Sbjct: 187 NLPVPSLFGLEMRSSTDLVMGDWVFTFSTGYYFCAVVMLLAFYLSIRIFRSPFGMMLRAI 246

Query: 214 RDNQKAFFSLNTTIIFAKLSAFA 236
           + NQ+             L+AF 
Sbjct: 247 KSNQQRINYTGLNAKPYMLAAFV 269


>gi|154245300|ref|YP_001416258.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
 gi|154159385|gb|ABS66601.1| inner-membrane translocator [Xanthobacter autotrophicus Py2]
          Length = 301

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/296 (12%), Positives = 89/296 (30%), Gaps = 18/296 (6%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
             +  + A GL+ + G LG+L++     YA+GAY+ V  G     + +   P     +  
Sbjct: 17  ASLVFLVAVGLTFIFGVLGVLNIAHGSFYALGAYTAVSAGLALTKAGF--SPWLTFPALF 74

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
            G I     L    + L +  +   E    IL+ +      +    +   +     +   
Sbjct: 75  VGAIAVGVVLGGLMEKLLLQRIYDKEQVLQILVTFAVFMILENVQRLVWGVQPYFMSEPL 134

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
            +                 ++      +   +  +LR T+       + ++++A  ++  
Sbjct: 135 QLLGNVSLFGISYTAYQTLFLPALALIVLFGLRFFLRHTSAGAQILAVTEDREAASAIGI 194

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                    F   +    + GA  A +              ++  ++    G+  +   A
Sbjct: 195 DAQKVYFITFIAGATLAALGGALAAPTTSL--MPGMGAEMIVLSFAVAATAGLGQIEGAA 252

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
            A  ++     +   +                     +  I +  V++ R   L  
Sbjct: 253 VAALMIGLGRSVAVYLA--------------PEFEVLVPYILMVAVLIFRPSGLFG 294


>gi|311278581|ref|YP_003940812.1| inner-membrane translocator [Enterobacter cloacae SCF1]
 gi|308747776|gb|ADO47528.1| inner-membrane translocator [Enterobacter cloacae SCF1]
          Length = 342

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/320 (11%), Positives = 99/320 (30%), Gaps = 17/320 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  +   L      S++ I ++  ++ IY + A G++ V+ + G + L+     
Sbjct: 29  VLIFMILLLIFFQLQNSNFLSERNIFNILTEVSIYGIMAVGMTFVILTAG-IDLSVGSIL 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +   +    G +   + P +         +    ++     +L         + +
Sbjct: 88  AVCAMTAAYVIK--GDNFTTVDPNAWGGMSWLLGLGICLAMGTVIGFLHGL-----GVTR 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L  +     G         +   G  +      +R+     +  I +   +  +  + 
Sbjct: 141 LRLPPFIVTLGGMTIWRGLTLVINDGAPIAGFDAGYRWWGRGELLGISIPIWIFALVAVG 200

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + L   +T        I  N +A       +    +S + +     G+AG   +A   
Sbjct: 201 GYLAL--HKTRWGRFVYAIGGNPEAARLAGVNVKRVLVSVYVLIGCLAGLAGFILSARLG 258

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                    S  + VI+ V++GG +                 +   +      + L    
Sbjct: 259 SAEAVA-GISFELRVIASVVIGGTS------LMGGYGRIGGTIIGSIIMGILINGLVLMN 311

Query: 315 SFNMRHTTLMVIALFLVILM 334
                   +  + + L +  
Sbjct: 312 VSAYYQQIITGLIIVLAVAF 331


>gi|161524802|ref|YP_001579814.1| monosaccharide-transporting ATPase [Burkholderia multivorans ATCC
           17616]
 gi|189350444|ref|YP_001946072.1| simple sugar transporter permease [Burkholderia multivorans ATCC
           17616]
 gi|160342231|gb|ABX15317.1| Monosaccharide-transporting ATPase [Burkholderia multivorans ATCC
           17616]
 gi|189334466|dbj|BAG43536.1| simple sugar transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 339

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 91/313 (29%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +    L         +     ++  QI   V+ + G++ V+   G + L+     
Sbjct: 38  LAGALIAMIALFSALSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAG-IDLSVGSVL 96

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +   ++         +   ++ A G + G  ++ +R       +L + E  +
Sbjct: 97  ALAASMVSVAALKWQWGPLPAALIGIAVATATGSLTGAVTVGWRIPSFI-VSLGVLEAAR 155

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  +         G                      F        + +    L    + 
Sbjct: 156 GLAYQLTNSRTAYIGDA--------------------FDFLSNPIALGISPAFLIAVAVM 195

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    L RT        I  N++A           K+  FA+  A  G+A  F  +  +
Sbjct: 196 IAAQFVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKILVFALMGALAGLASLFQISRLE 255

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +      +        
Sbjct: 256 AADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGANEPTKR 315

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 316 IITGAVIVVAVVL 328


>gi|226946376|ref|YP_002801449.1| amino acid ABC transporter-like protein [Azotobacter vinelandii DJ]
 gi|226721303|gb|ACO80474.1| amino acid ABC transporter-like protein [Azotobacter vinelandii DJ]
          Length = 293

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 88/305 (28%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A ++V L  R    +   +  
Sbjct: 8   LIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGAMVLFAALTFVSLLERGVPFVLAFLVT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A +     +I                 +    +   +    + +               
Sbjct: 68  LAAMVALALLIERAVLRPLVNRSPITLFMATLGLSYMLEGFAQALWGA------------ 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F  +       L A + L   +T I  + R + D+  
Sbjct: 116 QVHGLDLGIGDEPLEIGGLLLSQFDLFAAGTAAVLVAVLSLLFNKTRIGLSLRAVADDPL 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  +L   +       +AV+     +AG  + A               +  + ++I+GG 
Sbjct: 176 AALALGIRLQRIWAVVWAVAGFVGLVAGLLWGARLGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+    +L       +    ++              +   L +L+R   
Sbjct: 233 TSIGGAIAGGLIVGASEKLAEVYLGPFVGGGIENWFP---------YVLALLFLLVRPAG 283

Query: 339 LLRLR 343
           L   R
Sbjct: 284 LFGER 288


>gi|51596024|ref|YP_070215.1| ABC sugar transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|153946998|ref|YP_001401276.1| carbohydrate ABC transporter permease [Yersinia pseudotuberculosis
           IP 31758]
 gi|170024633|ref|YP_001721138.1| monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|186895128|ref|YP_001872240.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
 gi|51589306|emb|CAH20927.1| ABC sugar transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|152958493|gb|ABS45954.1| carbohydrate uptake ABC transporter 2 (CUT2) family, permease
           protein [Yersinia pseudotuberculosis IP 31758]
 gi|169751167|gb|ACA68685.1| Monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|186698154|gb|ACC88783.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
          Length = 340

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 86/285 (30%), Gaps = 14/285 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L +      +L V+  + +     A      +  +    ++  +FA G+ IV+ S GL  
Sbjct: 23  LQRPSTFTFMLIVIVCVTVGAINPAFLQLSNLFDIARASVVVGLFALGVLIVLASGGL-- 80

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
              V   AI A     +             ++  I+ ACG  +           L  ++L
Sbjct: 81  --DVSFTAIAALCMYAVTKFVLWYWPDAPVIAMFIASACGGAILGGINGVLVHSLKTSSL 138

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I++   Q +         G A                            +     +    
Sbjct: 139 IVTIGTQYLYRGGLLTFIGTALYMNIPEQLEQFGKSPLYTVSNNNQGITI-----LPLFF 193

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L + F S      L RT +  A   I  N      L   +   ++  F  +    G+AG 
Sbjct: 194 LILVFASLLTWWLLNRTLLGRAIFAIGGNSDIAQRLGFDVRGVQIFVFTYAGLLAGIAGM 253

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKA 287
              AS    +P      E  ++ +++     I GG  ++      
Sbjct: 254 VHVASNRIANPFDLNGLELTVIAAVILGGARITGGSGTVLGTLMG 298


>gi|312961232|ref|ZP_07775737.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
 gi|311284890|gb|EFQ63466.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas fluorescens WH6]
          Length = 293

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 90/305 (29%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A ++V L  R     W  +  
Sbjct: 8   LIGGLLAGVMYALVAIGFVLIYKASGVFNFAQGAMVLFAALTFVSLLERGFPFAWAFLAT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A +     +I  +           I  +    +   I    + +               
Sbjct: 68  LASLVVLALLIEKVVLRPLVNRPPIILFMATLGLSYLIEGLAQFLWGA------------ 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F  +       L  ++ L   +T I  + R + D+  
Sbjct: 116 QVHGLDLGIADEPLEIRGMLLSQFDLFAAGTAALLVLALSLLFNKTRIGLSLRAVADDPM 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +       +AV+     +AG  + A               +  + ++I+GG 
Sbjct: 176 ASMAVGIRLPRIWALVWAVAGFVGLVAGLLWGARLGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S+        ++    ++          S ++              +   L +L+R   
Sbjct: 233 SSIGGAIVGGLVIGAAEKIAEIYLGPIIGSGIENWVP---------YVLALLFLLVRPAG 283

Query: 339 LLRLR 343
           L   R
Sbjct: 284 LFGER 288


>gi|229591162|ref|YP_002873281.1| putative ribose transporter permease [Pseudomonas fluorescens
           SBW25]
 gi|229363028|emb|CAY49998.1| putative ribose transport system permease protein [Pseudomonas
           fluorescens SBW25]
          Length = 335

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 85/292 (29%), Gaps = 27/292 (9%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +   ++  Q+ +  + A G++ V+   G + L+     A        L     + +   I
Sbjct: 54  RNGLNILDQVTVLGILAIGMTAVIVIGG-IDLSVGSVLAFSMMMLGWLYQDQAVPLGFAI 112

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P+S       G++ G      +                  L            +    ++
Sbjct: 113 PISIASGMLAGLVSGGLITYAKLPPFIAT-----------LTMMSVARGLANILTEGRQI 161

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   SL     F        +F+  +++          ++LR  A       +  +
Sbjct: 162 VGYPDWFTSLATVRHFGFLSATVGLFLVMLVVA--------WVFLRFRAGGRNLYAMGGS 213

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL- 275
            +        +    L  +A+S A  G+A    AA  D  S      S  +  I+ V++ 
Sbjct: 214 PEVARLSGIKVRAITLWVYAISGALAGIAAVTLAARLDS-SQPSAGLSLELDAIAAVVIG 272

Query: 276 -----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                GG+ S+        I+  +      +    F   +       +  T 
Sbjct: 273 GASLSGGVGSIGGTLVGVLIIGVLRNGLNLLGVSPFIQQVVIGVVIALAVTI 324


>gi|182440398|ref|YP_001828117.1| putative sugar uptake ABC transporter permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326781067|ref|ZP_08240332.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|178468914|dbj|BAG23434.1| putative sugar uptake ABC transporter permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326661400|gb|EGE46246.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 349

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 89/294 (30%), Gaps = 26/294 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + +   L+         S      + +Q     + A G+++V+   G + L+    +
Sbjct: 46  VLAVLLTVILIASFVYPTFASLDNARGVTVQASFLAIVALGMTLVI-ITGGIDLSVGSVF 104

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+G               +L   +  ++      ++    +        I TL      +
Sbjct: 105 ALGGVLAAWASQ----WGFLAALLVPLVVCGGIGLVNGLLIARANMAPFIVTLAALLAAR 160

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +L+ +        G                    + F              +L    L 
Sbjct: 161 GMLLAFTD-----EGATTYLVPKDSAFAELGQGSLWGFGHP-----------ILIALALF 204

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +  L L+RT+       +  +  A   +   +   K+  + +S    G+AGA  AA   
Sbjct: 205 GAGGLLLQRTSFGQTLFAVGGSSDAATLMGLPVARTKILVYTLSGLLAGLAGALNAARLS 264

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
                +    E   + ++VI     +GG  S+S       +L  +  L   +  
Sbjct: 265 SGVTIVGVGMELDAISAVVIGGTLLIGGAGSVSGTLWGVLLLAVIQNLINQIGS 318


>gi|111018356|ref|YP_701328.1| ABC sugar transporter, permease component [Rhodococcus jostii RHA1]
 gi|110817886|gb|ABG93170.1| ABC sugar transporter, permease component [Rhodococcus jostii RHA1]
          Length = 352

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 95/283 (33%), Gaps = 13/283 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
              A+   +   +     +S + + ++        + A  +++++   G   L+  +A  
Sbjct: 38  LFGAIAIFIFFMVVAPPFRSPEALATVLYASSTIGIMACAVALLM-IGGEFDLSAGVAVT 96

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             + +  ++     L++W    ++ ++S A G   G   +K +     I       +   
Sbjct: 97  TSSLAASMIAYNLHLNLWAGAALALVVSLAVGFFNGYLVMKTKIPSFLITLSSFLMLTGI 156

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L   K IT   A   V+D   F             F SSF +  + +   +L     +A
Sbjct: 157 NLAVTKLITGQVATPSVSDMAGFDSAK-------KVFASSFEVGGVSVRITVLWWLLFTA 209

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L +T I N    +  NQ +  ++   +   K+  F          G     S + 
Sbjct: 210 IATWVLFKTRIGNWIFAVGGNQDSARAIGVPVTKVKIGLFMTVGFAAWFVGMHLLFSFNT 269

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIG 293
           +       +E + +I+ VI      GG  +    A    I   
Sbjct: 270 VQSGQGIGNEFLYIIAAVIGGCLLTGGYGTAIGAAIGAFIFGM 312


>gi|91786263|ref|YP_547215.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91695488|gb|ABE42317.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas sp. JS666]
          Length = 294

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/307 (10%), Positives = 85/307 (27%), Gaps = 28/307 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                IY + A G ++++ + G+L         +GA + +       L   +++ V  + 
Sbjct: 14  FAIGCIYALIALGFTMIIRTTGVLHFAQGEVVMLGAMAGLTALQFAQLPFIVVLLVGMLF 73

Query: 103 SGACGMIMGLPSLKFRGD--YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
            G   +++ +   ++           +I +     +L     +  G              
Sbjct: 74  GGLVAVVVEVTVYRWLNYRKAPLANVIIATVGVSIVLQNVARLVWGSEARAYPKLFE--- 130

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                      +          + ++++    +   + L+L +T    A +    +  A 
Sbjct: 131 --------VDTYTLGSAHIPPQLIWIIVLGAMVMIVLQLFLSKTQTGRALQACAQDADAA 182

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
           + +   +    ++ +    A +   GA         +     F   I       +GG+ S
Sbjct: 183 YLMGIDVRR--MTTYTYGIAGLLGGGAGVLLGSMFYASFGMGFIVGIKAFVAATVGGLGS 240

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +        +   V      +    +   +       +               +    L 
Sbjct: 241 IGGAVLGGLVFGLVETATSVVISSAYRDAIGMILLILILL-------------VSPGGLA 287

Query: 341 RLRTPSN 347
            LR P  
Sbjct: 288 GLRRPQR 294


>gi|239813361|ref|YP_002942271.1| inner-membrane translocator [Variovorax paradoxus S110]
 gi|239799938|gb|ACS17005.1| inner-membrane translocator [Variovorax paradoxus S110]
          Length = 326

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 49/320 (15%), Positives = 99/320 (30%), Gaps = 27/320 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V   + +        S   + ++ +Q  I  + A G++  +   G + L+     A
Sbjct: 30  LVGLVAISVFMIAATDNFLSWGNLQNIALQSSINAIIAVGMTAAI-LTGGIDLSVGAVVA 88

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +  ++GL   L +P+   +    G+  G      R   + +    M      
Sbjct: 89  LSGTLASGMMVQFGLPPVLAVPLGLAVGVVIGLFNGYCVAYLRMPPIIVTLATMGIA--- 145

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                               +Y  G  +  L   F F    V+  I +  +++   +L A
Sbjct: 146 ---------------RGIALIYTGGYPIDGLPDSFAFLGGGVLAGIKVPILIMLATYLVA 190

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++L +           I  N++A       +   KL  +A+S     +AG   AA    
Sbjct: 191 YVLLNMA--PFGRYVYAIGGNEEATRLSGVRVSRYKLLVYALSGFTAAVAGIVQAARVTS 248

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
                      +  I+ V++GG              I    +   +     N L     S
Sbjct: 249 -GQPGVGVGFELDAIAAVVMGGT-----SIAGGRGAIVGTLVGALLLGVLNNGLNMIGVS 302

Query: 316 FNMRHTTLMVIALFLVILMR 335
             ++      I L  + + R
Sbjct: 303 PYLQLIIKGGIVLLAIFISR 322


>gi|166031381|ref|ZP_02234210.1| hypothetical protein DORFOR_01070 [Dorea formicigenerans ATCC
           27755]
 gi|166028786|gb|EDR47543.1| hypothetical protein DORFOR_01070 [Dorea formicigenerans ATCC
           27755]
          Length = 317

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 83/313 (26%), Gaps = 26/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + VV+ ++         +   + ++  Q  I  + A G S+V+   G + L+     
Sbjct: 17  MICIFVVFTIICSALGKQFLTLNNVMNIINQASINAVVAIGASLVI-LTGGIDLSVGSVV 75

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
                   +           +I    + +        L S      Y  +   I++    
Sbjct: 76  GFVGIFLALRLQEGMPIPVAIILCLVLGAAVGLFNGILIS------YGKVPAFIVTLGSM 129

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +     I NG   +                                +   +L +    
Sbjct: 130 QAVRGLAQIINGGQAVSGFP--------------LEIGAVMKTKLFGVIPIGVLYVIVFY 175

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A +IL L  T        +  N+ A       +   +++ + +   F   AG    +   
Sbjct: 176 AVMILILSYTKFGRRIYALGGNEHAARLSGIKVKRLEVAVYVLCGIFAAFAGVMLLSRLL 235

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + + VI      GG   L+       IL  +      MN   +   
Sbjct: 236 YADPSAGNSYEMNAIAASVIGGISMSGGKGRLANTVAGAIILATLTNGLQIMNVATYYQT 295

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 296 VITGLVVIVAVFV 308


>gi|126452113|ref|YP_001065942.1| branched chain amino acid ABC transporter permease [Burkholderia
           pseudomallei 1106a]
 gi|242316252|ref|ZP_04815268.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b]
 gi|254197765|ref|ZP_04904187.1| ABC transporter, permease protein [Burkholderia pseudomallei S13]
 gi|126225755|gb|ABN89295.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a]
 gi|169654506|gb|EDS87199.1| ABC transporter, permease protein [Burkholderia pseudomallei S13]
 gi|242139491|gb|EES25893.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b]
          Length = 311

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 104/314 (33%), Gaps = 22/314 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M   GL+++ G LG+L+      Y +GAY+   + +R    + L+   
Sbjct: 8   LLNGLSYGLLLFMLCAGLTLIFGMLGVLNFAHASFYMLGAYAGYAIAARTSFWVALVAAP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+ +        L        +L    L     +               G+ +   L  
Sbjct: 68  LAVGALGALCERTLLRRVRASGHLDELLLTFGLAYLI-----------AEGVKLVWGLAP 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   V + +    F     ++  +  +++L    +  ++   LR +      R     + 
Sbjct: 117 LAAPVPAALDGAAFTIYGAVFSRYRAFMMLVSIAMLGALWAVLRASRTGLVVRAALTRRA 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  +L   +       FA  +A   +AG   A     +       +   +V +++++GG+
Sbjct: 177 AVEALGHDVPRVMTLVFAAGTALAALAGVIGAPLA--VIEPAMAQTLGSVVFAVIVIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT---------TLMVIALF 329
            SL+    A+ +L               ++      +                +  + L 
Sbjct: 235 GSLAGALVASLVLGCAQTFAAASRASLSDAAQWAGIALPDAWRALTLAQFAPLIPYLLLI 294

Query: 330 LVILMRSHSLLRLR 343
           +V+  R+  L   R
Sbjct: 295 VVLACRARGLFGER 308


>gi|134102666|ref|YP_001108327.1| ribose ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291004648|ref|ZP_06562621.1| ribose ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133915289|emb|CAM05402.1| ribose ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 346

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 80/312 (25%), Gaps = 15/312 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +L  +  L   L   A  +   I ++ +Q    +M A G++ V+ + G + L+      
Sbjct: 34  LVLVALCLLFSALRPDAFPTLFNIQTLLVQAAPLLMLAVGMTFVIITSG-IDLSVGSVLV 92

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                                    + +G    + G          L             
Sbjct: 93  FAGVVSAQTMEALSGGDATHAGWGVIAAGLVVALAGGAVWGVLNGLLVAVAR-------- 144

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +               A +L   G  VR++    R           +  +++    ++ 
Sbjct: 145 -VPALIVTLGSFGAALGAAQLLTNGIDVRTVPTALRQTLGTGTSFGVVPNLVILAAVVTL 203

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L  T        I  N +A       +    ++ +A++    G+AG    A    
Sbjct: 204 LGAWLLHTTVFGRYTYAIGSNAEAARRSGIRVTRHLVAVYALTGVLSGLAGFMSLAYFGT 263

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            +           + ++V     + GG+ ++        I   +           F   +
Sbjct: 264 TTISGHSNDNLNAIAAVVLGGTSLFGGVGTVLGSVIGVFIPAVLDTGFVMAGVRPFWQPI 323

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 324 AVGAVLVAAVWM 335


>gi|53725044|ref|YP_102635.1| branched-chain amino acid ABC transporter permease [Burkholderia
           mallei ATCC 23344]
 gi|67642657|ref|ZP_00441410.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4]
 gi|124386437|ref|YP_001026441.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia mallei NCTC 10229]
 gi|126451326|ref|YP_001080286.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247]
 gi|254177505|ref|ZP_04884160.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399]
 gi|254199572|ref|ZP_04905938.1| ABC transporter, permease protein [Burkholderia mallei FMH]
 gi|254205891|ref|ZP_04912243.1| ABC transporter, permease protein [Burkholderia mallei JHU]
 gi|254358711|ref|ZP_04974984.1| ABC transporter, permease protein [Burkholderia mallei 2002721280]
 gi|52428467|gb|AAU49060.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Burkholderia mallei ATCC 23344]
 gi|124294457|gb|ABN03726.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia mallei NCTC 10229]
 gi|126244196|gb|ABO07289.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247]
 gi|147749168|gb|EDK56242.1| ABC transporter, permease protein [Burkholderia mallei FMH]
 gi|147753334|gb|EDK60399.1| ABC transporter, permease protein [Burkholderia mallei JHU]
 gi|148027838|gb|EDK85859.1| ABC transporter, permease protein [Burkholderia mallei 2002721280]
 gi|160698544|gb|EDP88514.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399]
 gi|238523844|gb|EEP87280.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4]
          Length = 311

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 104/314 (33%), Gaps = 22/314 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M   GL+++ G LG+L+      Y +GAY+   + +R    + L+   
Sbjct: 8   LLNGLSYGLLLFMLCAGLTLIFGMLGVLNFAHASFYMLGAYAGYAIAARTSFWVALVAAP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+ +        L        +L    L     +               G+ +   L  
Sbjct: 68  LAVGALGALCERTLLRRVRASGHLDELLLTFGLAYLI-----------AEGVKLVWGLAP 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   V + +    F     ++  +  +++L    +  ++   LR +      R     + 
Sbjct: 117 LAAPVPAALDGAAFTVYGAVFSRYRAFMMLVSIAMLGALWAVLRASRTGLVVRAALTRRA 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  +L   +       FA  +A   +AG   A     +       +   +V +++++GG+
Sbjct: 177 AVEALGHDVPRVMTLVFAAGTALAALAGVIGAPLA--VIEPAMAQTLGSVVFAVIVIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT---------TLMVIALF 329
            SL+    A+ +L               ++      +                +  + L 
Sbjct: 235 GSLAGALVASLVLGCAQTFAAASRASLSDAAQLAGIALPDAWRALTLAQFAPLIPYLLLI 294

Query: 330 LVILMRSHSLLRLR 343
           +V+  R+  L   R
Sbjct: 295 VVLACRARGLFGER 308


>gi|307315822|ref|ZP_07595333.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
 gi|307322580|ref|ZP_07601921.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|306891771|gb|EFN22616.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|306898531|gb|EFN29207.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
          Length = 293

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 48/316 (15%), Positives = 108/316 (34%), Gaps = 26/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    I    Y + + GL+I+ G L +++      Y +GA+   +L S
Sbjct: 2   IFGIPLQAFLGQLLIGLINGSFYALLSLGLAIIFGLLRVINFAHGAQYMLGAFMAWLLLS 61

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+  W  + ++ ++ G  G ++    L+       +  L+ +      +        G
Sbjct: 62  YLGIGYWPALILAPLLVGLIGAVIERTMLRRLYTLDPLYGLLFTFGLALTIEGTFRYLYG 121

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G   A     +G               F+   I+  +V++    +     L + +T +
Sbjct: 122 ASGQPYATPALLMG----------GANLGFMFLPIYRGWVIVFSLVICLGTWLMIEKTKL 171

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
            +  R   +N     S    + F     + + +A   +AG   A         +   +  
Sbjct: 172 GSYLRAATENPVLVQSFGINVPFLLTLTYGLGAALAAIAGVLAAPIYQV--SPLMGSNII 229

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+        +L     L                  +      ++ +
Sbjct: 230 IVVFAVVVVGGMGSIMGAIVTGYLLGIAEGLTKVF--------------YPEASNIVIFV 275

Query: 327 ALFLVILMRSHSLLRL 342
            + +V+L+R   L   
Sbjct: 276 IMAIVLLLRPAGLFGR 291


>gi|226360476|ref|YP_002778254.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226238961|dbj|BAH49309.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 352

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/283 (16%), Positives = 95/283 (33%), Gaps = 13/283 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
              A+   +   +     +S + + ++        + A  +++++   G   L+  +A  
Sbjct: 38  LFGAIAIFVFFMIVAPPFRSPEALATVLYASSTIGIMACAVALLM-IGGEFDLSAGVAVT 96

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             + +  ++     L++W    ++ ++S A G   G   +K +     I       +   
Sbjct: 97  TSSLAASMIAYNLHLNLWAGAALALVVSLAVGFFNGYLVMKTKIPSFLITLSSFLMLTGI 156

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L   K IT   A   V+D   F             F SSF I  + +   +L     +A
Sbjct: 157 NLAVTKLITGQVATPSVSDMQGFDSAK-------KVFASSFTIAGVSVRITVLWWLLFTA 209

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L +T I N    +  NQ +  ++   +   K+  F          G     S + 
Sbjct: 210 VATWVLFKTRIGNWIFAVGGNQDSARAIGVPVTKVKIGLFMTVGFAAWFVGMHLLFSFNT 269

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIG 293
           +       +E + +I+ VI      GG  +    A    I   
Sbjct: 270 VQSGQGIGNEFLYIIAAVIGGCLLTGGYGTAIGAAIGAFIFGM 312


>gi|320012439|gb|ADW07289.1| inner-membrane translocator [Streptomyces flavogriseus ATCC 33331]
          Length = 332

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/279 (12%), Positives = 80/279 (28%), Gaps = 30/279 (10%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            LF     +     +  +Q+   V+ A G+++V+G+ G + L+     A+ A    +   
Sbjct: 48  ALFTEHFMTADNFRTQLVQVAPIVIVALGMALVIGTEG-VDLSVGSTMALAAAFLPLYLG 106

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              +   ++  ++  + GA                     L+     Q I+        G
Sbjct: 107 YGLVPALIVSLLAGAVVGAVNGA-----------------LVSLVGLQPIVATLALFVGG 149

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                       +       I      S      + +  V+     L+ ++   ++RT  
Sbjct: 150 ------RGLALVMADGQLKQIVNPDLLSLGTGSFLGIPLVVWIAGVLAVAVAFLVQRTTF 203

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                 +  N+ A       +    +  + +      +AG    A      P        
Sbjct: 204 GRQVVAVGGNRSAAALAGLPVKRVLIGVYVICGVLAALAGILATARLTASDPSSLGTLME 263

Query: 267 IIVISIVILGGM------TSLSKIAKATAILIGVVELCC 299
           +  I+ V++GG         +        ++  +     
Sbjct: 264 LSAITAVVVGGTPLNGGSVRVLGTVAGALLMQLLRATLV 302


>gi|312794558|ref|YP_004027481.1| inner-membrane translocator [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181698|gb|ADQ41868.1| inner-membrane translocator [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 373

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/359 (10%), Positives = 93/359 (25%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  + +++ +   L  G   + + +  +  Q+ I  + A G+  V+   G + L+
Sbjct: 8   RTYTLIIAILLIWTIFTILTDGNFLTPRNLSMLARQMAITALVAIGMVFVI-VAGHIDLS 66

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                        +L    G S    +    +I    G+  G            +    M
Sbjct: 67  VGSVVGFTGAIAGVLQVWNGWSTPATVIAVLIIGILIGIWQGYWVAYRGVPAFIVTLAGM 126

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF------- 182
                 +L+  + IT                    S++        +++  I        
Sbjct: 127 LVFRGGVLLASRGITISPFKESFTFIGQGYLNKALSVVFGAVLIVGYLLLTISQRNRRKK 186

Query: 183 ----------------------------------MYYVLLGMCFLSASIILWLRRTAISN 208
                                             +   +L +   +  +    + T    
Sbjct: 187 YNLEVLPIGLEVAKAAVVIALIAAFTGVMISYEGISIPVLILVIFTILLTFVSQNTTFGK 246

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N++A       I    +  F +      +AG    +  D  +       E   
Sbjct: 247 YVYAIGGNKEAAKLSGINIKNVTMKIFILMGFLSALAGIVLTSRLDAATSGAGTNMELDA 306

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + ++     LGG  ++        I+  +      +N  Y   L+            
Sbjct: 307 IAAAILGGTSTLGGEGTVPGAIIGALIMASIDNGMSLLNLEYSYQLIVKGLVLVFAVWL 365


>gi|289192144|ref|YP_003458085.1| inner-membrane translocator [Methanocaldococcus sp. FS406-22]
 gi|288938594|gb|ADC69349.1| inner-membrane translocator [Methanocaldococcus sp. FS406-22]
          Length = 303

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 93/283 (32%), Gaps = 15/283 (5%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
              +  + +        +G+Y  + L   +G+  +L +PV  ++    G+I  L      
Sbjct: 23  TYITTNVPNFAQGSYAIVGSYVALTLLKLFGICPYLSLPVLFVVGAVVGLITYLALKPL- 81

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
                      S     I      +    A    ++ L  +  + ++   F     S   
Sbjct: 82  ------IKRGASVEILMIATLAIDLILLGAIGAYSEILSQIVGSTQAKFVFANLDFSLFG 135

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
           ++  ++     +  L   + L L +T    A R   +N     ++   +   +L ++ +S
Sbjct: 136 FKGILFVSTFVIILLLIGLYLLLYKTKFGIALRASMENPSLAQTMGIDVEKTRLFSWILS 195

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
            A  G+AG      ++ +         +I   SIV  GG+  +S       I+     L 
Sbjct: 196 GALAGVAGGLLPFMQEIVPATGDLIIISIFAASIV--GGLRHISGALIGGYIIGISESLI 253

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                        F   F +    + +I +   +L+  + +  
Sbjct: 254 TYYL------AQAFGTGFLVYGKVISLIIMIATLLIAPYGITG 290


>gi|225568519|ref|ZP_03777544.1| hypothetical protein CLOHYLEM_04596 [Clostridium hylemonae DSM
           15053]
 gi|225162747|gb|EEG75366.1| hypothetical protein CLOHYLEM_04596 [Clostridium hylemonae DSM
           15053]
          Length = 325

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/318 (12%), Positives = 88/318 (27%), Gaps = 27/318 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +  + +      L L        +   + ++        + A  +  V+   G + L+
Sbjct: 21  KTNGGILIALAAMFLFLSFANQYFFTSNNMANLFNYFTTNCVLAMCMMCVL-ITGEIDLS 79

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+      +  +R       L+    + +    +   + +               
Sbjct: 80  ISSFVALSGIVLCVFLNRGMSFGISLLLTILIGALVGILTGTVIAFSG------------ 127

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
              F   L     I      I   +R+      + +L              I +  VLLG
Sbjct: 128 MPSFIVTLAMQGVIRGSAYIISAGERISSADEWLFNLTSKRYLGVPLPTIIILVIAVLLG 187

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +            RT+          N++A       +    +  FA+S A   +AG+F 
Sbjct: 188 LLLY---------RTSFGKHMYAAGGNREAAIYSGINVKKIVIVTFAISGALACLAGSFV 238

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A+      P      E   V + V+      GG  ++S +     ++  +      +   
Sbjct: 239 ASRVTSGQPSAGAGYEGDAVAAAVLGGTAFTGGRGTVSGVIIGALVIGTLTNGMNLLEIN 298

Query: 305 YFNSLLKFDCSFNMRHTT 322
            +   +       +    
Sbjct: 299 AYWQQICKGLIIMLAVMI 316


>gi|254362339|ref|ZP_04978450.1| possible xylose ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica PHL213]
 gi|261491822|ref|ZP_05988401.1| putative xylose ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|153093923|gb|EDN74846.1| possible xylose ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica PHL213]
 gi|261312477|gb|EEY13601.1| putative xylose ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 375

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 107/357 (29%), Gaps = 47/357 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L  + V+         GA  S + I ++  Q  I  + A G+  V+ S   + L+  
Sbjct: 12  YIMLIAIVVIMSFFSIATDGAYLSARNISNLLRQTSITGILAIGMVFVIISA-EIDLSVG 70

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM-- 129
               +      I    +G  + L I V+ ++    G   G      +     +    M  
Sbjct: 71  SLMGLLGGFAAISNVWWGWPLSLTIIVTLILGVMLGAWSGWWVAYQKVPSFIVTLAGMLA 130

Query: 130 -----------------------------SEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
                                         ++   IL           G Y       L 
Sbjct: 131 FRGVLVGLTNGTTVSPISNEMTTIGQGYLPDMVGMILGTIGIFCFIVWGSYQRKARQKLN 190

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYV----------LLGMCFLSASIILWLRRTAISNAW 210
            TV S+ +         I  +   Y+          +L +  L+ +     R+TA     
Sbjct: 191 LTVPSMSKDTLKYGLVAIIVLGAIYLLNDYRGVPFPVLVLVILAIAGTFLARKTAFGRHI 250

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N  A      ++   KL+ FA++   + +AG   ++     +P   + +E   + 
Sbjct: 251 YAIGGNIDAARLSGISVEKVKLAIFALNGLLVAIAGLILSSRLGAGAPSAGQNAELDAIA 310

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + VI      GG+ S+  +     I+  +      ++   F   +       +    
Sbjct: 311 ACVIGGASLAGGIGSIYGVVIGAFIIALLDNGMSMLDVPTFWQYIVKGGILLLAVWV 367


>gi|72162182|ref|YP_289839.1| ABC transporter permease [Thermobifida fusca YX]
 gi|71915914|gb|AAZ55816.1| possible ABC transporter, permease protein [Thermobifida fusca YX]
          Length = 287

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/296 (12%), Positives = 82/296 (27%), Gaps = 30/296 (10%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            IY      L I+  +  +++       A+ A       ++   S WL    +       
Sbjct: 16  AIYAALGLSLVIIYQATRVVNFAQPA-LALMAVYLAYTVTQATGSYWLGFATAMASGTLL 74

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G++     ++   D   +  +I++     +L     +  G         + F        
Sbjct: 75  GVVTERLLVRPVQDKSPLNAIILTLGLLMVLQGLAGMIWGNLQHSFPPPMSFR------- 127

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                   + V       + L  +  ++  + L  R T +    R    + ++       
Sbjct: 128 ------DLAAVPISPEEIFALAAVGVVATVLFLLYRFTPLGLRMRAAAFHAESARLSGVR 181

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +       + ++SA   +AG          +     F      I+  +LGG+ +      
Sbjct: 182 VGLMLTLGWGIASAIGALAGMLAVPPLLSPTVLDAVFVYG---IAAAVLGGLDNPFGALA 238

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              +L   +    G       +L                  L  V+ +R   L   
Sbjct: 239 GGLVLGVGLSYVSGYVGSELTTLAAL-------------AILIAVLSLRPAGLFSR 281


>gi|271968705|ref|YP_003342901.1| monosaccharide-transporting ATPase [Streptosporangium roseum DSM
           43021]
 gi|270511880|gb|ACZ90158.1| monosaccharide-transporting ATPase [Streptosporangium roseum DSM
           43021]
          Length = 363

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 89/309 (28%), Gaps = 27/309 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++ +V   +L L      +   + ++  Q+ I+ + A G  +V+ + G + L+      
Sbjct: 62  LVVLLVAVGILTLASDEFLTGNNLANLARQVAIFGIIAVGQLLVILTAG-IDLSVGSVLG 120

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   S              L+    + +    +   L +                   + 
Sbjct: 121 LSGASTAQFLVAGMPIWPALLLGVGIGTVLGIVNGLLVT-------------------RA 161

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L  +               +     TV+ L   F+  ++  I  I    ++  +     
Sbjct: 162 LLPPFIATLGMLGIARGIVLVTTDAQTVQGLPAGFQAIANGTILGIPNLLIVAALVTGVM 221

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
             +L   RT        +  N ++       +    +S +A+S    G+ G   A+    
Sbjct: 222 WFVL--SRTVFGRYIYAVGSNPESARLAGVPVRMVTISVYAISGLLAGLGGVLLASRLGA 279

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + + VI      G   S    A    I+  +      +    F   +
Sbjct: 280 GIPTAGTGFELNAIAACVIGGASLFGAKGSAIGAATGALIMGVLNNGGNLLAINAFYLQI 339

Query: 311 KFDCSFNMR 319
                  + 
Sbjct: 340 AIGVLILVA 348


>gi|222102108|ref|YP_002546698.1| ABC-transporter [Agrobacterium radiobacter K84]
 gi|221728225|gb|ACM31234.1| ABC-transporter [Agrobacterium radiobacter K84]
          Length = 290

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 97/306 (31%), Gaps = 26/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL++V G LG+++L     Y +GAY             W  +  
Sbjct: 10  LLNAVQYGLVLFLVASGLTLVFGILGVINLAHGAFYMLGAYLA----------WWFTMAS 59

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            +++ G  G       +    +   I  L   +    +L+ +  I        +      
Sbjct: 60  GSLVVGILGASAVSFVVGLLLEAFFIRRLYGRDHLSQVLLSFGLILVIDEVRQMLFGRDV 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V   +      +    Y ++   +++    L+ SI L + +T I    R   +N+ 
Sbjct: 120 QSVPVPDWLSGSINLTDMQSYPLYRLALIVFCLILAMSIFLVINKTRIGMIVRAGAENRD 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L           FAV  A   +AGA  A                  V+ ++    +
Sbjct: 180 MTRALGIPFDRVNRLVFAVGIALAALAGAVIAPVSTVFPGMGDSMLILSFVVVVLGG--V 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A    ++  +          +                 L+ + +  V+L R   
Sbjct: 238 GSVPGAAIGALMIGLIDTFGKVFLPEFSG--------------MLIYVLMAAVLLWRPTG 283

Query: 339 LLRLRT 344
           +L  R 
Sbjct: 284 ILGKRE 289


>gi|150376872|ref|YP_001313468.1| monosaccharide-transporting ATPase [Sinorhizobium medicae WSM419]
 gi|150031419|gb|ABR63535.1| Monosaccharide-transporting ATPase [Sinorhizobium medicae WSM419]
          Length = 334

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 93/313 (29%), Gaps = 20/313 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               +   L   LF     S + ++    Q+   V+ A G+++V+   G + L+     A
Sbjct: 29  VAAFLALILFNVLFTPNFLSLQTLNVNLTQVATIVIVATGMTLVIA-TGGIDLSVGSLMA 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           IG        +   +     +   + +  A  +   LP +      L    L+     Q 
Sbjct: 88  IGG-------ALAPMIFMGALFPVSSMPVAVALAFILPVIATALLGLFNGLLVTRFAIQP 140

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I+        G            +      + R   F    +     +   ++ M  ++A
Sbjct: 141 IIATLVLFIAG------RGIAQVMTNGNLQVFRNEGFQFIALGRIAGIPAQVILMIVIAA 194

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                +R T        +  N+KA       +   KL  + +S A  G+AG    A    
Sbjct: 195 IAWAAVRHTVFGRQVIAVGGNEKAARLTGIPVHRVKLLVYMISGALAGVAGLIVVARNSA 254

Query: 256 ISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              ++      +  I+ V +      GG  ++        ++  V             +L
Sbjct: 255 SDANLVGLGMELDAIAAVAVGGTLLTGGRANIMGTLIGALVIQLVRYTLLANGVPDAAAL 314

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 315 IVKAALILLAVFI 327


>gi|311694907|gb|ADP97780.1| inner-membrane translocator [marine bacterium HP15]
          Length = 282

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 91/283 (32%), Gaps = 26/283 (9%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            GL+S    + Y +GAY   +L    G++  L+I ++++        +    L    +  
Sbjct: 16  AGLVSFGQGLYYCVGAYVAGMLTQFVGVTDILVIMLASVAVSVAIAAIIGLLLCRYREIF 75

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
                +   +    L+          G  VA+                 +          
Sbjct: 76  FAMFSMAFSMILYGLLVRNQFLGSTDGFNVANP------------SLLGWTPGAEASSDL 123

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +  V + +  +  ++     ++    A   +R+N+     L  ++       + +++A  
Sbjct: 124 VLIVAVFLVIVLGAVAWRYLKSLSGYAGEAVRENEIRLEYLGGSVFRVVYVKYIIAAALA 183

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
            + G   A     + P+M  ++ +   + I ++GG   ++    A  +   +      ++
Sbjct: 184 AIGGTITALVSGHVDPEMAYWTTSGEFVFIALMGGTAHVAAPIVAAVLFEALRTYAFAVS 243

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
            Y +                ++  AL  +IL     L  L   
Sbjct: 244 PYTW--------------QMILGFALLAIILFMPSGLWSLVER 272


>gi|148254023|ref|YP_001238608.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. BTAi1]
 gi|146406196|gb|ABQ34702.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 293

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 92/304 (30%), Gaps = 24/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  +V  + G+ +        + A    +      +  WL   +
Sbjct: 8   LVGGLLAGVMYSLVAIGFVLVFKASGVFNFAQGS-MVLCAALTFVTLRDKEIPFWLAAVI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  I  A  +++    L+   +   I   + +     ++     I  G +          
Sbjct: 67  TLAIMVAIAILIERVVLRPLVNRPQITLFMATLGLSFVIEGLAQIAMGAS---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         V    F          L A++ ++  RT    A R I D+ +
Sbjct: 117 -VHELDLGIIDTPVKFGDVQVSQFDLVAAGTAAVLVAALSIFFSRTRTGIALRAIADDPQ 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +       + V+     +AG  + A +             +  + ++I+GG 
Sbjct: 176 AALSIGIRLQSLWQIVWGVAGFVSLVAGLLWGARQ---GVQFALTLVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS++       I+     L            +    S          +     +L+R   
Sbjct: 233 TSIAGAIVGGLIVGASDSLAEIYLGNLLGGSVSTWFS---------YVLAVAFLLVRPAG 283

Query: 339 LLRL 342
           L   
Sbjct: 284 LFGE 287


>gi|270264516|ref|ZP_06192782.1| transporter [Serratia odorifera 4Rx13]
 gi|270041652|gb|EFA14750.1| transporter [Serratia odorifera 4Rx13]
          Length = 329

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 92/302 (30%), Gaps = 18/302 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +++  L LL ++  + L        +   +  +     I  + A GL  VV   G + ++
Sbjct: 12  RHEFYLGLLVLLLAIGLSAGTSEFLTLGNLTDVATSYAILGILACGL-FVVLIAGGIDIS 70

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                AI  Y       ++G    L   ++  +    G++ G      +          +
Sbjct: 71  FPAITAIAQYVMATWVIQHGGGFPLAFVLAMGVGLLLGLVNGFLVYWLKVP-------AI 123

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 + + +  +     G ++     +    +            + +    +  + + 
Sbjct: 124 IITIATLNLFYGLLVYATNGTWLYGFPDWFMDGINWFSFQGADGYDYGLTLPLLCLLAVV 183

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +          +  T +      +  N+ A   L   ++      +       G+A    
Sbjct: 184 IVTGVL-----MNFTRLGRQIFAMGGNRDAASRLGLNLLRLHFYVYGYMGILAGIAAVVQ 238

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A     ++P+     E  ++ ++V     + GG  SL+       +L  +      ++  
Sbjct: 239 AQITQSVAPNSLLGFELTVLAAVVLGGTSMTGGRGSLTGTLLGVVLLAFLQNGLTLLSVS 298

Query: 305 YF 306
            +
Sbjct: 299 AY 300


>gi|90423174|ref|YP_531544.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90105188|gb|ABD87225.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 292

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 86/290 (29%), Gaps = 22/290 (7%)

Query: 52  FAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMG 111
            A GL+++ G + +++        I  Y    L + + +   L  P+ A      G ++ 
Sbjct: 23  IAAGLALIFGLMDVVNFAHGEFLMIAMYVTFFLFAFFAIDPLLAAPLVAAALFVFGAVVY 82

Query: 112 LPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFR 171
           L  ++F       A    + +    +     +     G+          +   S +    
Sbjct: 83  LLVVRF-------AMRAKANVGMVQIFATFGLAIVMRGLAQFFFTPDYRSIPHSWLGGQT 135

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
                V   +              ++  ++++T    A    R++  A   +        
Sbjct: 136 ISLGGVFLPVPQLVGAGVSILAFTALFFFIKKTDFGRALEATREDAGAVALVGIDKNRVF 195

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              + + +A +G+AGA  A             S  +I    V LGG  S+        I+
Sbjct: 196 ALGWGLGAALVGLAGAIMAMFFYI--YPDVGASFALIAYVTVALGGFGSVFGAFAGGIIV 253

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             V      +      S+              +     LV+ +R   L  
Sbjct: 254 GLVEASTALLLPPSLKSVG-------------IYAVYLLVVFIRPRGLFG 290


>gi|190151269|ref|YP_001969794.1| sugar ABC transporter permease [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307251183|ref|ZP_07533104.1| Xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307258018|ref|ZP_07539770.1| Xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307262411|ref|ZP_07544056.1| Xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|307264620|ref|ZP_07546201.1| Xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189916400|gb|ACE62652.1| Xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306856699|gb|EFM88834.1| Xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306863381|gb|EFM95312.1| Xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306867788|gb|EFM99619.1| Xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306870036|gb|EFN01799.1| Xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 375

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/357 (13%), Positives = 99/357 (27%), Gaps = 47/357 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L  + V+         GA  S + I ++  Q  I  + A G+  V+ S   + L+  
Sbjct: 12  YIMLIAIVVIMSFFSVATDGAYLSARNISNLLRQTSITGILAIGMVFVIISA-EIDLSVG 70

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI------- 124
               +      I    +G  + L I V+ ++    G   G      +     +       
Sbjct: 71  SLMGLLGGFAAIADVWWGWPLPLTIAVTLVLGTLLGAWNGWWVSYRKVPSFIVTLAGMLA 130

Query: 125 ----------------------------------ATLIMSEIFQNILIKWKPITNGKAGI 150
                                               L +  +F  +          K   
Sbjct: 131 FRGILIGLTNGTTVSPISNDMTAIGQGYIPDVTGMILGLVAVFCFVTWGTYQRKARKNLN 190

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                                     +     + + +L +  L+   +   R+TA     
Sbjct: 191 LNVPDATKDIMKYGLFAICVLGAIYLLNDYRGIPFPVLVLAILTVVGMFIARKTAFGRHI 250

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N +A       +   KL+ FA++   + +AG   +A     +P   + +E   + 
Sbjct: 251 YAIGGNIEAARLSGINVEKVKLTIFAINGFMVAIAGLILSARLGAGAPSAGQNAELDAIA 310

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + VI      GG+ S+  +     I+  +      ++   F   +       +    
Sbjct: 311 ACVIGGVSLAGGIGSVYGVIIGAFIIALLDNGMSMLDVPTFWQYIVKGAILLLAVWV 367


>gi|330892813|gb|EGH25474.1| inner-membrane translocator [Pseudomonas syringae pv. mori str.
           301020]
          Length = 254

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/268 (9%), Positives = 75/268 (27%), Gaps = 17/268 (6%)

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +G+Y   +    +      L+    +I      ++                 + +     
Sbjct: 1   MGSYRTYVTSVVFQRYFPELMGWYFIIGIGMAFVVTFAFGLLLERCF--IRFMYNRPLDT 58

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +L  W      +           +       ++     S  +   +   +++     ++A
Sbjct: 59  LLATWGLSLVLQQLFRQVFGPKEVSVPTVQWLQGAWKISDGLELPLNRIFIIGLTFVIAA 118

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           ++ L+L R+      R +  N+    +            FA+     G+AG+ F      
Sbjct: 119 AVFLFLYRSRWGLRIRAVTQNRAMAGAAGINTARVDSVTFALGCGLAGIAGSSFTMLAS- 177

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            +  +      +    +V+ GG+ SL     +   +         +        +     
Sbjct: 178 -TGPVSGQQYLVDTFIVVVFGGVESLLGTFLSAFAIGQTQISLEYLTTGSMAKAITL--- 233

Query: 316 FNMRHTTLMVIALFLVILMRSHSLLRLR 343
                     + + +++  R + L   +
Sbjct: 234 ----------LVVIVLLFFRPNGLFATK 251


>gi|332286073|ref|YP_004417984.1| branched-chain amino acid ABC transporter, permease protein
           [Pusillimonas sp. T7-7]
 gi|330430026|gb|AEC21360.1| branched-chain amino acid ABC transporter, permease protein
           [Pusillimonas sp. T7-7]
          Length = 291

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 102/302 (33%), Gaps = 26/302 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                 Y + A  +++V   + +++      +  GA+   +     GLS+WL +P+S + 
Sbjct: 12  LSVGSTYALIALAITLVFRGMDVINFAQGEFFMAGAFMGFVFHVDLGLSMWLALPLSMIS 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +   G ++    L+   D +   +L++  I   I+++        +  Y    +      
Sbjct: 72  AFILGSLLERVFLRKLEDNVNGLSLLVMTIALFIILRSVAQLIFGSSAYRFPAMSDGV-- 129

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                         V        V+     + A + +   +TA+  + R +  ++     
Sbjct: 130 ---------LRLGGVQISAQYVIVIATTFIIMALLYVLFTKTALGLSLRAVAQDKTTARM 180

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +       F + S    +AG  +A     +          +   +  +LGG+  +S
Sbjct: 181 MGINVSRVNNVTFGLCSVLGAVAGIVYAPVA--VLTFDMGQLIILKGFTAALLGGLGLVS 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   L  + +    +    +  L+ F               L L+IL++ + LL  
Sbjct: 239 GAVLGGFTLGVIEQYGTLLLASAYKDLVSFS-------------ILLLIILVKPNGLLGK 285

Query: 343 RT 344
           + 
Sbjct: 286 KQ 287


>gi|301064229|ref|ZP_07204672.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
 gi|300441674|gb|EFK05996.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
          Length = 299

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 99/301 (32%), Gaps = 28/301 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR---YGLSIWLLIPVS 99
             + +I  +F+ GLS+V+G L + ++     Y IGA+    +         + W+ +  +
Sbjct: 20  LSRTVILFIFSSGLSLVLGVLRIPNVFHSSLYMIGAFMTFSIVQMVGGGHPAFWIALIGA 79

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +      + +     ++  +   +  ++ +     +L     I  G           + 
Sbjct: 80  PIGVAVLSLAIERGLFQYLYEREHLMLILFTFSMSLVLGDLVKIVWGT---------EYK 130

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +    +        + +  +  ++L     +   +   + RT I    +    +++ 
Sbjct: 131 SVPIPHAFQGVVSLFGGLPFPKYNVFLLCMGPIVGLLLWFLVTRTKIGKISQAAAVDREM 190

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             ++   + +     F +     G+ GA  A +           S  +    IVI+GG+ 
Sbjct: 191 VGAVGINVSWVFGFIFVIGCFLAGLGGALVAPTVSI--SLGMDTSLTMEGFLIVIMGGLG 248

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           ++      + I      L                  +         +A+ +V+L+R   L
Sbjct: 249 NIWGPLLGSLIFGLTQSLG--------------LLVWPQFGIIFPYLAVIVVLLVRPTGL 294

Query: 340 L 340
           L
Sbjct: 295 L 295


>gi|229828570|ref|ZP_04454639.1| hypothetical protein GCWU000342_00634 [Shuttleworthia satelles DSM
           14600]
 gi|229793164|gb|EEP29278.1| hypothetical protein GCWU000342_00634 [Shuttleworthia satelles DSM
           14600]
          Length = 326

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/323 (13%), Positives = 98/323 (30%), Gaps = 22/323 (6%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            + LN+   +  L+ +     L +   A   ++++ +    +      + G++ V+   G
Sbjct: 12  KIGLNRIILLGVLVLMFLACCLGIDGFAAAGKEHLLNTLNYVYFLGFLSLGVTFVIA-TG 70

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            +  +        A       + YG  + + I ++ +I    G   G             
Sbjct: 71  GIDFSIGPVMFCCALVAGYCLNSYGFPLVICIVLAVIIGLIFGAFNGWLVAYQSVPAF-- 128

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
              I+S    NI      +               +    R+LI +  FP   V++ +   
Sbjct: 129 ---IVSMASMNIAKGIAAVFTKTQSQSWPLSTDPVNGWFRNLISYKGFPVGLVVFLLVAA 185

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
                +             T        +  N++A       I   ++ A+ +    +G+
Sbjct: 186 LCSCIL-----------YNTKAGRYILCLGSNREAVRLSGVDIKRWEMLAYVICGLLVGL 234

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
           A  +F A    + P       N  +   V+     +GG+ S+       +I+  + E   
Sbjct: 235 ASVYFVACYTTVQPGYGDQYNNEAIAGCVMGGTSMVGGLASILGTVIGVSIISMLQEGLL 294

Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322
            +       L+       +    
Sbjct: 295 ALGLGKDIQLIITGIIVIVAVYI 317


>gi|182434910|ref|YP_001822629.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178463426|dbj|BAG17946.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 350

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/296 (12%), Positives = 77/296 (26%), Gaps = 25/296 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
           A      +  +  Q  +  +   G++ V+   G + L+     A+   S           
Sbjct: 65  AFLDTGNLQLILTQASVIGVVTVGMTFVI-ISGGIDLSVGAMVALA--SVWATTLATQEY 121

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            +  I  +A+I G    ++    + + G    IATL M    + + ++            
Sbjct: 122 GFAGIAFTAVIVGLAAGLVNGVLIAYGGMVPFIATLAMLASARGLALQITDGK------- 174

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                      V              I  I    ++  +      +IL   RT       
Sbjct: 175 --------TQIVTVDSVLDLGLPDSYILGIPPLVIMFAVVTAVGWLILN--RTTFGRRTV 224

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +  N +A       +   +L  + +S    G+A                   E   + +
Sbjct: 225 AVGGNAEAARLAGIDVRRQRLYLYLLSGLCCGIAAFMLIVLAGSGQNTNGNLYELDAIAA 284

Query: 272 IVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            +I      GG  ++        I   +  +    N       +            
Sbjct: 285 AIIGGTLLSGGRGTIVGSVLGVLIFTTITNIFALNNLQSDVQQIAKGAIIVAAVLV 340


>gi|71909654|ref|YP_287241.1| inner-membrane translocator [Dechloromonas aromatica RCB]
 gi|71849275|gb|AAZ48771.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Dechloromonas aromatica RCB]
          Length = 315

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 59/272 (21%), Positives = 117/272 (43%), Gaps = 15/272 (5%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
             Q++      ++LI+ + A  L++V+G  G+ SL     +  GAY+  I  S       
Sbjct: 31  FGQEFYIGFATRVLIFALAASSLNLVLGFGGMFSLGHAAFFGAGAYAAAICMSSGIADAL 90

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L  P++   +G   +++G  SL+ RG Y  + TL  +++   + +  +    G  G+ +A
Sbjct: 91  LAFPLAMAAAGLLALVVGAISLRTRGGYFIMITLAFAQMAYYLFVSARS-WGGDDGLPLA 149

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
            R+                    +  +  ++Y  LG   L       L         + I
Sbjct: 150 SRMT--------------LGGFSLTSDSALFYATLGCLALVMVFFGRLADARFGRVIQAI 195

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           R+N+    +L   +   +L  FA+  A  G+AGA  A      SP++ +++++  ++ +V
Sbjct: 196 RENETRMEALGYPVFRYRLICFALGGALAGLAGALLANLTGLASPNLLQWTQSGTLLVMV 255

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           I+GG+  L        IL+ + E   G+  ++
Sbjct: 256 IIGGVGYLYGGVVGAVILLMLEESLVGVTEHW 287


>gi|270261405|ref|ZP_06189678.1| transporter [Serratia odorifera 4Rx13]
 gi|270044889|gb|EFA17980.1| transporter [Serratia odorifera 4Rx13]
          Length = 342

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 98/328 (29%), Gaps = 25/328 (7%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFL-----GATKSQKYIDSMGIQILIYVMFAWGLSIV 59
           S ++ K   I  ++  +  +   L           +   +  + +Q+ I  + A G++ V
Sbjct: 21  SGKMPKDTGIFIVMIGIALIFEILGWYIRDQSFLMNPNRLLLIVLQVAIIGIIAVGVTQV 80

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           + + G + L+     A+ A     L                 IS     ++ LP+    G
Sbjct: 81  IITTG-IDLSSGSLIALTAVVAASLAQTSDS-----------ISPMYPALLDLPAAIPIG 128

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
             + +  +        I     P      G+ V+ R      T  + + F     + +  
Sbjct: 129 AGIGVGIVCGFINGFLITRTGIPPFIATLGMMVSARGLAQYYTQGNPVSFLSDGFTSIGQ 188

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
                 + L +        + L+ T        I  N  +       +    ++ + ++ 
Sbjct: 189 GAMPVIIFLVIA---VIFHIALKHTRYGKYIYAIGGNMTSARVSGINVNKYLVTVYTIAG 245

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGV 294
              G+AG   AA        M    E   + + VI     +GG+  ++       IL  +
Sbjct: 246 GLAGLAGVVLAARVSSGQSSMGMSYELDAIAAAVIGGSSLMGGVGRITGTLIGAVILGLI 305

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                 +    +   +          + 
Sbjct: 306 KSGFTFIGVDSYIQDIIKGVIIVAAVSI 333


>gi|288937604|ref|YP_003441663.1| inner-membrane translocator [Klebsiella variicola At-22]
 gi|290512342|ref|ZP_06551709.1| ribose transport system permease [Klebsiella sp. 1_1_55]
 gi|288892313|gb|ADC60631.1| inner-membrane translocator [Klebsiella variicola At-22]
 gi|289775337|gb|EFD83338.1| ribose transport system permease [Klebsiella sp. 1_1_55]
          Length = 332

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 96/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +         ++  + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 31  ILPILILIVAVFGFIAPNFFTESNLLNITRQASINIVLAAGMTFII-LTGGIDLSVGSIL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A     +       + LL   +A++ G    +     + F G    I TL      +
Sbjct: 90  GTTA--VAAMVVSLIPELALLSIPAALMLGLLLGLFNGALVAFAGLPPFIVTLGTYTALR 147

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                          +     F      Y   + ++++    + 
Sbjct: 148 GAAYLLAD-------------------GTTVINSDISFEWIGNDYLGPVPWLVVIALAVI 188

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 189 AVCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGVMSASRLY 248

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 249 SANGNLGVGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 308

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 309 VIKGAVIIIAVLI 321


>gi|217423614|ref|ZP_03455115.1| ABC transporter, permease protein [Burkholderia pseudomallei 576]
 gi|254297894|ref|ZP_04965347.1| ABC transporter, permease protein [Burkholderia pseudomallei 406e]
 gi|157807200|gb|EDO84370.1| ABC transporter, permease protein [Burkholderia pseudomallei 406e]
 gi|217393472|gb|EEC33493.1| ABC transporter, permease protein [Burkholderia pseudomallei 576]
          Length = 311

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 102/314 (32%), Gaps = 22/314 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M   GL+++ G LG+L+      Y +GAY+   + +R    + L+   
Sbjct: 8   LLNGLSYGLLLFMLCAGLTLIFGMLGVLNFAHASFYMLGAYAGYAIAARTSFWVALVAAP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+ +        L        +L    L     +               G+ +   L  
Sbjct: 68  LAVGALGALCERTLLRRVRASGHLDELLLTFGLAYLI-----------AEGVKLVWGLAP 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   V + +          ++  +  +++L    +  ++   LR +      R     + 
Sbjct: 117 LAAPVPAALDGAALTVYGAVFSRYRAFMMLVSIAMLGALWAVLRASRTGLVVRAALTRRA 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  +L   +       FA  +A   +AG   A     +       +   +V +++++GG+
Sbjct: 177 AVEALGHDVPRVMTLVFAAGTALAALAGVIGAPLA--VIEPAMAQTLGSVVFAVIVIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT---------TLMVIALF 329
            SL+    A+ +L               ++      +                +  + L 
Sbjct: 235 GSLAGALVASLVLGCAQTFAAASRASLSDAAQWAGIALPDAWRALTLAQLAPLIPYLLLI 294

Query: 330 LVILMRSHSLLRLR 343
            V+  R+  L   R
Sbjct: 295 AVLACRARGLFGER 308


>gi|307945067|ref|ZP_07660403.1| inner-membrane translocator [Roseibium sp. TrichSKD4]
 gi|307770940|gb|EFO30165.1| inner-membrane translocator [Roseibium sp. TrichSKD4]
          Length = 343

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 54/344 (15%), Positives = 110/344 (31%), Gaps = 52/344 (15%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---------------- 82
           I +   +   Y + A GL+++ G+LG+++      + IGA+  V                
Sbjct: 8   ILNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFCAVTLQRILTLSFETIDPE 67

Query: 83  -----------------------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
                                  +  +    S+ L I  S  I    G++M    +K   
Sbjct: 68  RLDFLGNPLKVKTPYVESWFGPEMGAAIIDWSVPLAILFSIPIMALVGLMMERGLIKHFY 127

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
                  ++++     +L +      G   I       F G+     +    F  + +IY
Sbjct: 128 KRPHADQILVTFGLAIVLQEIIKYFYGANPIPTPAPAAFAGSFDFGAM--LGFDPNVIIY 185

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
             +     L    +   +  +L+ T      R    +++    L   I       FA+++
Sbjct: 186 PYWRIVYFLFSAAIIGGVFAFLQFTTFGMVVRAGMADRQTVGLLGIDIDRRFTIMFALAA 245

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
              G+AG  +A            F     V+ +V    M SL     A  +L  +     
Sbjct: 246 VVAGLAGVMYAPINSPNYHMGMDFLVLSFVVVVVGG--MGSLPGAVLAGFVLGILES--- 300

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                 F S+ +    F   +  ++ +   +++L R   L+  +
Sbjct: 301 ------FASMAQVVALFPGINQIVIYLVAIIILLTRPRGLMGRK 338


>gi|269121643|ref|YP_003309820.1| inner-membrane translocator [Sebaldella termitidis ATCC 33386]
 gi|268615521|gb|ACZ09889.1| inner-membrane translocator [Sebaldella termitidis ATCC 33386]
          Length = 321

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 91/320 (28%), Gaps = 22/320 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L +      +L +V  +      G   S   I  + +Q  + ++ A G+   +   G + 
Sbjct: 8   LWQKYGTFGILILVAIVFGITQPGLFFSFNNITQIILQSSVNILIACGVFFAILIAG-ID 66

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+            G    L I +  +I+GA    M    +   G +  I TL
Sbjct: 67  LSVGSVIALTGMFTA-KLLLAGFHPILAILIGGVIAGAILGAMNGLLINVTGLHPFIITL 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               IF+ + +                          +             + I +    
Sbjct: 126 GTQSIFRGVALTISK---------------ANPIFGFNASFTNTVAGKIPFFGIDIPVPA 170

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    ++  +     +T +      +  N +A +     +    L  F +S    G+AG 
Sbjct: 171 LIAIGVALILSFITNKTKLGRNIYALGGNSQAAWFSGINVKLHTLIVFIISGVCAGIAGV 230

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
              A      P      E   + + +I      GG   +  +     I+  +       N
Sbjct: 231 VSTARVGSAEPQAGAGFETFAIAAAIIGGTSFFGGKGKIFGVVMGGLIIGVISNGLNLNN 290

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              +   +       +  T 
Sbjct: 291 VPPYYQQIVMGGLIILAVTV 310


>gi|225386812|ref|ZP_03756576.1| hypothetical protein CLOSTASPAR_00560 [Clostridium asparagiforme
           DSM 15981]
 gi|225047074|gb|EEG57320.1| hypothetical protein CLOSTASPAR_00560 [Clostridium asparagiforme
           DSM 15981]
          Length = 329

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 98/315 (31%), Gaps = 22/315 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            LL ++   +  +      +   + S+  +     + A G++ V+   G + ++     A
Sbjct: 12  ILLLLLMIAVFSVQTPLFFTVNNLSSILREASFVGIIACGMTFVI-ITGGIDISVGSTMA 70

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + A     L    G  +  ++ V+A++  A G + GL   K       +           
Sbjct: 71  LCAMVCSNLLRFTGAPLAAVLAVTALLGLALGGVNGLLVTKLNIPDFIVT---------- 120

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L            I   D        +++           +IY + + +  L +     
Sbjct: 121 -LATMNIYRGLTRAINATDVESLKNPMIKNASFKLLGGRIGLIYLVVIAFFALALVSHYL 179

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                 R T +      +  N +A      +    K+ AFA +    G+AG   AA    
Sbjct: 180 L-----RHTRLGLYTYAVGSNAQAARLTGISFAGIKIFAFAFTGLACGIAGIMTAARMMT 234

Query: 256 ISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            + ++    E  ++ +IVI      GG   ++     T ++  +      +    +   +
Sbjct: 235 ATTEIGVGMEFNVIAAIVIGGCSLQGGRGDMTGTLIGTLLMAVINSGIVQIGISTYYQPV 294

Query: 311 KFDCSFNMRHTTLMV 325
                        + 
Sbjct: 295 IKGGIILAAVLFDIF 309


>gi|55980418|ref|YP_143715.1| branched-chain amino acid ABC transporter permease [Thermus
           thermophilus HB8]
 gi|55771831|dbj|BAD70272.1| branched-chain amino acid ABC transporter, permease protein
           [Thermus thermophilus HB8]
          Length = 297

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 95/306 (31%), Gaps = 20/306 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +  L+Y + A G  ++  +  +++       AIGA+         G    L   +
Sbjct: 8   LFSGVVLGLVYALAALGFVLIYKASRVVNFAQGQFIAIGAFLAYWAMVALGAPFLLAAAL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  ++   G  +    LK       I+ ++ +    ++L           G+        
Sbjct: 68  ALALTALLGFGVERVFLKRMVGQPIISVIMATIGLASLL----------DGLIHLTPFGA 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +  + +         V         L       A    + +R+ +  A R++ D+Q 
Sbjct: 118 GNFSYPAFLPSGGVALLGVQVSYPQLLALGFTLAFLALFTWFFQRSTLGIAMRSVADDQM 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL  ++      A+A +      AG             +        V  +VILGG+
Sbjct: 178 AAMSLGVSVEKVFALAWAAAGLTAAAAGIVVGTIAGLNLDGLVHIGL--KVFPVVILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++  +  L  G    +                    + L LV+  + H 
Sbjct: 236 DSIPGAVVAGILIGVLENLAAGYLDPFVPG--------GGTRDVFPFLVLLLVLWFKPHG 287

Query: 339 LLRLRT 344
           L     
Sbjct: 288 LFGTEE 293


>gi|317047968|ref|YP_004115616.1| inner-membrane translocator [Pantoea sp. At-9b]
 gi|316949585|gb|ADU69060.1| inner-membrane translocator [Pantoea sp. At-9b]
          Length = 338

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 93/306 (30%), Gaps = 27/306 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
             +  +     + A G+++V+   G + L+     AI   +   L        ++++   
Sbjct: 57  IDILNRAAPVALLAVGMTLVIA-TGGIDLSVGAVMAIAGATAATLTVAGHSLPFIILATL 115

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                       L +L     ++A   L++                  AG  VA  +   
Sbjct: 116 GTGLACGLWNGVLVALLRIQPFVATLILMV------------------AGRGVAQLITQG 157

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                       F S  +       ++ L +     ++ L  R+TA+      +  N +A
Sbjct: 158 QIVTFDNDNLSWFGSGSLWLLPVPVWITLVVA---LAVWLLTRKTALGLFIEAVGINLRA 214

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +   T     +S +A+S     +AG   AA       +       +  I  V++GG  
Sbjct: 215 ARNAGVTGWLVVMSTYAISGVCAAVAGLIVAADIRGADANNAGLWLELDAILAVVIGGA- 273

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
                       + +  +   +       +L       +      V+ + ++++     L
Sbjct: 274 ----SLMGGRFNLVLSLIGALIIQSMNTGILLSGFPPELNQVVKAVVVMCVLLIQSPRFL 329

Query: 340 LRLRTP 345
             L+  
Sbjct: 330 AMLKRR 335


>gi|167772753|ref|ZP_02444806.1| hypothetical protein ANACOL_04135 [Anaerotruncus colihominis DSM
           17241]
 gi|167665231|gb|EDS09361.1| hypothetical protein ANACOL_04135 [Anaerotruncus colihominis DSM
           17241]
          Length = 316

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/321 (9%), Positives = 80/321 (24%), Gaps = 25/321 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
               L +   +  +          S   +  +  Q    ++ A G    +   G + L+ 
Sbjct: 12  RIGTLMIFVFMILVTSVFAPPQFLSPGNLVQILTQSATTMLIACGEFFAILIAG-IDLSV 70

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A+       +          ++     +    G I G      +            
Sbjct: 71  GSVLALSGVVTAKMMVAGMPFGLAVLLGGVGVGALLGAINGALINFTKLHPFI------- 123

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                       IT G   I+    +                 +   +    +   ++  
Sbjct: 124 ------------ITLGTQSIFRGVTMIISDAKPIFGFPQSFKTAFGGMIGGKIPMPVVWA 171

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++A +     ++ +   +  +  N++A +     +    L    +S    G+ G    
Sbjct: 172 LLVAAILWFVTTKSKMGRNFYALGGNKEAAWFSGINVRLHTLLVHIISGICAGICGVVMI 231

Query: 251 ASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A      P      E   + + +I      GG   +  +     I+  +      ++   
Sbjct: 232 ARLGSAEPMAGSGHETFAIAAAIIGGTSFFGGKGKIPNVIVGALIIGLINNALNMLSVET 291

Query: 306 FNSLLKFDCSFNMRHTTLMVI 326
           +   +          T  M I
Sbjct: 292 YFQQVATGALIIGAVTLDMFI 312


>gi|113474628|ref|YP_720689.1| beta-methylgalactoside transporter inner membrane component
           [Trichodesmium erythraeum IMS101]
 gi|110165676|gb|ABG50216.1| inner-membrane translocator [Trichodesmium erythraeum IMS101]
          Length = 334

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/297 (10%), Positives = 80/297 (26%), Gaps = 6/297 (2%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +      +  Q    ++ A G+  V+ + G   L+      +GA     L      
Sbjct: 30  PDFLTVNNFRLILTQASTRIIIALGVGGVLITQG-TDLSAGRIVGVGAVLSASLLQGADY 88

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              +   +  +      +   +    F      +  +     F   L     I    +  
Sbjct: 89  PYRMYPNLMELPLIIPMLFTLIICAFFGFINGVVVGMFKVPPFIATLGTMIIIYGLNSIY 148

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
           +    L        +           ++    + Y+++    +   I +   +T +    
Sbjct: 149 FDRPPLGAQPVGGLAENFTTFVQGDLILGSFEIPYLIIYAVIVIGVIWVLWNQTILGRNM 208

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N +A      ++I   L  + ++    G AG   A      + +     E   + 
Sbjct: 209 YAIGGNIEAATVSGVSVIKYLLIVYTLAGLLYGFAGILEAGRVGSATNNTGNMYELDAIA 268

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + V+      GG+ ++S +     I   +      +    +   +            
Sbjct: 269 ACVVGGVSTSGGIGTVSGVVTGVLIFQIINYGLVFIELSPYLQFIVKGLIIVSAVAI 325


>gi|307317725|ref|ZP_07597163.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|306896487|gb|EFN27235.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
          Length = 298

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 89/275 (32%), Gaps = 2/275 (0%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
             +Y   A+G +I         L     +A     +V+        +WL++P +  +  A
Sbjct: 15  AALYAALAFGYAIAFAVTRRADLTYGALFAFAGQIFVLFADVGWNRLWLVLPAALGLGAA 74

Query: 106 CGMIMGLPSLKFRGDYLA-IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
             +  GL +    G Y+        +       +    +    A +    R  +L   + 
Sbjct: 75  AALAFGLGAGLIAGRYVMRPLAFSSANAVVVASLGSLLVLMETARLASDTRSLWLPPFLH 134

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
            ++ F+  P+  V   +        M  L A     L R+     WR + ++++A     
Sbjct: 135 DVVVFWPNPAFPVALTVVQLVNTALMMALVAGGHWLLTRSYAGRYWRAVSEDREAAALCG 194

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                  ++A+ V+S      G   A+    +       +  + V+ I  +GG TS    
Sbjct: 195 IDPGAVYIAAYGVASLIAAFCGILAASYYGNMDF-GTGLTFGVKVLFIAAIGGQTSPLFA 253

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           A   A +  +  L        +     F     + 
Sbjct: 254 ALGAAGIGLMETLWSAYGPILWRDFAIFGFLVIVL 288


>gi|302522881|ref|ZP_07275223.1| ABC transporter integral membrane protein [Streptomyces sp. SPB78]
 gi|302431776|gb|EFL03592.1| ABC transporter integral membrane protein [Streptomyces sp. SPB78]
          Length = 347

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/318 (11%), Positives = 86/318 (27%), Gaps = 25/318 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++ +LA +  +          +   +  +  Q  +  +        V   G + L+
Sbjct: 42  RTLTLVGVLAALALVGAITKPDQFIATSNLQLILTQSSVIGVVVV-GVTFVIISGGIDLS 100

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+ A  +    +      W ++  + ++  ACG+I G+     R      ATL M
Sbjct: 101 VGAIVAL-ASVWATTVATQEYGFWSILFTALLVGLACGLINGVLVAYGRLVPFI-ATLAM 158

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
               + + ++          +     L      V  +                   +++ 
Sbjct: 159 LASARGLALQITDGQTQIVSVKSVLDLGRRENYVLGIPP-----------------LVIV 201

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              +     L L RT        +  N +A       +   +L  + +S    G+A    
Sbjct: 202 FLAVVIVGWLLLNRTTFGRRSVAVGSNPEAARLAGIDVRRQRLYLYLLSGLCCGIAAFLL 261

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFY 304
                          E   + + +I      GG  ++        I   +  +    N  
Sbjct: 262 VVLVGSGQSTNGNLYELDAIAAAIIGGTLLSGGRGTIVGSVLGVLIFTTINNIFALNNLQ 321

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +       +    
Sbjct: 322 TDVQQIAKGAIIVIAVLV 339


>gi|238761862|ref|ZP_04622836.1| Autoinducer 2 import system permease protein lsrC [Yersinia
           kristensenii ATCC 33638]
 gi|238699976|gb|EEP92719.1| Autoinducer 2 import system permease protein lsrC [Yersinia
           kristensenii ATCC 33638]
          Length = 329

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/307 (10%), Positives = 93/307 (30%), Gaps = 39/307 (12%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             + +    +     I ++ A G ++V+     + ++      + A +  +     G  +
Sbjct: 6   YFNLQTFTMIFGSAQILILLAIGATMVM-LTRNIDVSVGSITGLCAVTVGM-ALNAGFGL 63

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            +    + ++    G+  G+     R   +      +      +L+              
Sbjct: 64  AVSCLFALLVGMVAGLFNGILVTWLRIPAIVATLGTLGLYRGLMLL-------------- 109

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
              L                 +  +     + ++++ +    A ++    +TA   ++  
Sbjct: 110 ---LTGGKWIEGLPADLKSLSTPILFSISPIGWLIMLLIVSMALLL---GKTAFGRSFYA 163

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
             DN +    L       ++ AF+++     +AG  FA+    I        E   + + 
Sbjct: 164 TGDNLQGARQLGIRTDSIRIFAFSMNGVMAALAGIIFASQIGFIPNQTGSGLEMKAIAAC 223

Query: 273 V-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           V     +LGG  ++        +L  +  +   +    +             +  +  + 
Sbjct: 224 VLGGISLLGGTGTIIGAILGAYLLTQIDSVLVLLRLPAW------------WNDFIAGLV 271

Query: 328 LFLVILM 334
           L  V++ 
Sbjct: 272 LLAVLVF 278


>gi|227114474|ref|ZP_03828130.1| xylose transport system permease [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 393

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/357 (11%), Positives = 97/357 (27%), Gaps = 47/357 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             ++  +  +     ++  GA  S + + ++  Q  I  + A G+  V+ S   + L+  
Sbjct: 30  YVMIAAIIAIMLFFTYMTDGAYLSARNLSNLLRQTAITGILAVGMVFVIISA-EIDLSVG 88

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL--------- 122
               +   +  I    +G  + L I V+  +    G   G      +             
Sbjct: 89  SMMGLLGGAAAIFDVWFGWPLPLTIVVTLALGLLLGAWNGWWVAYRKVPSFIVTLAGMLA 148

Query: 123 --------------------------------AIATLIMSEIFQNILIKWKPITNGKAGI 150
                                                    +   I  +W+  ++     
Sbjct: 149 FRGILIGITNGTTVSPTSEAMSQIGQSYLPSGMGFMFGAIGLMVFIAWQWRRRSSRARLG 208

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            + +                      +     +   +L +  L    I    RTA     
Sbjct: 209 LLVNPPAGDIGRQTFTALVVLGAIYLLNDYRGVPTPVLVLTLLMLGGIFLATRTAFGRRI 268

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N  A       +   K++ FA++   + +AG   ++     SP     +E   + 
Sbjct: 269 YAVGGNIDAARLSGVNVERTKMAVFAINGLMVAVAGLILSSRLGAGSPSAGNIAELDAIA 328

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 329 ACVIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYVVKGGILLLAVWM 385


>gi|222082416|ref|YP_002541781.1| sugar ABC transporter [Agrobacterium radiobacter K84]
 gi|221727095|gb|ACM30184.1| sugar ABC transporter [Agrobacterium radiobacter K84]
          Length = 355

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 97/322 (30%), Gaps = 12/322 (3%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
               + +L     +       A  +   + S+   + +  +   G+++ +   G   L+ 
Sbjct: 37  RSGAVFILLAALIIGFTAAQPAFINLNNLMSILQAVSVVAILGAGVTVTLAVGG-FDLSI 95

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A    +       + L ++  +P+      A G+I     ++ R   L +ATL M 
Sbjct: 96  GAVAASSVMAASYAMIVWQLDVYATVPLVLSFGAAIGLINAFIIVRLRVPDL-LATLSMM 154

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +   + +      +  +G+ + +     G+   S +   R+    V+    +  +L+  
Sbjct: 155 FLLSGLQLIPTAGRSISSGLILPNGSKAAGSYDPSFLLIGRYSLFGVVPVSVVLMILVA- 213

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 + +   RT I         N+ A      +    K  A+ +S     + G   A
Sbjct: 214 ----LVLFVLTERTRIGRLLFATGGNEVATRLAGASTTRLKTLAYVISGTLASLGGIVIA 269

Query: 251 ASRDRISPDMFKFSENIIVIS----IVILGGMT-SLSKIAKATAILIGVVELCCGMNFYY 305
           A   R             V +      +LG    ++         +  ++     +N  Y
Sbjct: 270 ARVGRGDVSSGGSLLMDAVAASLIGFAVLGLRRPNVLGTLVGAVFVGVLLNGLTMLNAPY 329

Query: 306 FNSLLKFDCSFNMRHTTLMVIA 327
           +                   + 
Sbjct: 330 YTQDFVKGAVLVGALALTYGLG 351


>gi|254462194|ref|ZP_05075610.1| inner-membrane translocator [Rhodobacterales bacterium HTCC2083]
 gi|206678783|gb|EDZ43270.1| inner-membrane translocator [Rhodobacteraceae bacterium HTCC2083]
          Length = 343

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 54/344 (15%), Positives = 108/344 (31%), Gaps = 52/344 (15%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI--------------- 83
           I +   +   Y + A GL+++ G+LG+++      + IGA+  V                
Sbjct: 8   ILNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFCAVTLQRILSLSTVTLSKT 67

Query: 84  ------------------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
                                     +    S+ L I  S  +  A G IM    +K   
Sbjct: 68  ETNFLGQPAEIKTPYVESWFGPEAGAAIIDWSVPLAILFSIPVMIAIGFIMERGLIKHFY 127

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
                  ++++     +L +      G   I       F G+    +     F  + +IY
Sbjct: 128 KRPHADQILVTFGLAIVLQEVIKYFYGANPIPTGAPEVFKGSFDFGV--LLGFDPNAIIY 185

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
             +          + +++  +L+ T      R    +++    L   I       F +++
Sbjct: 186 PYWRLVYFGFSALIISAVFAFLQFTTFGMVVRAGMADRETVGLLGINIDKRFTIMFGLAA 245

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  G+AG  +A            F     V+ +V    M SL     A  +L  +     
Sbjct: 246 AVAGLAGVMYAPINSPNYHMGMDFLVLSFVVVVVGG--MGSLPGAVLAGFMLGILES--- 300

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                 F S+ +           ++ +   L++L R   L+  +
Sbjct: 301 ------FASMNEIKSLIPGIDQIIIYVVAILILLTRPRGLMGRK 338


>gi|254453748|ref|ZP_05067185.1| permease protein of ribose ABC transporter [Octadecabacter
           antarcticus 238]
 gi|198268154|gb|EDY92424.1| permease protein of ribose ABC transporter [Octadecabacter
           antarcticus 238]
          Length = 335

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/319 (9%), Positives = 95/319 (29%), Gaps = 18/319 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   ++             + ++  Q+ I+ + A G++ V+   G + L+     A
Sbjct: 26  LIFLLGLVVIFTSLQPRFLLPINLFNILRQVSIFGIIAVGMTFVILIRG-IDLSVGSLVA 84

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +      ++        +         S A    +   ++      +A+A L +      
Sbjct: 85  VAGLCAAVVAKGGIDGSFSSDGAGWHWSFAALAALTAGTVAGLLQGMAVAWLAVPAFVVT 144

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +         G             G  +      + +  + ++  + +  ++  +  L  
Sbjct: 145 L--------GGLTIFRGIALAIGNGGNIAGFSPEYGWWGTGLVGPVPVPLIVFAVVALIG 196

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++L   R     +   +  N +A       +    ++ + +     G++G   +A  + 
Sbjct: 197 YLVLTQTR--FGRSVYAVGSNPEAARLSGINVNRVTIATYGIIGFCAGLSGFVLSARLNS 254

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
                      + VI+ V++GG +              +  +   +      + L    +
Sbjct: 255 AEAVA-GTGYELTVIAAVVIGGTS------LHGGTGGVIGTVIGAILTGVLINGLVLLNT 307

Query: 316 FNMRHTTLMVIALFLVILM 334
                  ++ + +   +  
Sbjct: 308 PPYTQQIMIGLIIIAAVAF 326


>gi|148257928|ref|YP_001242513.1| sugar ABC transporter membrane protein [Bradyrhizobium sp. BTAi1]
 gi|146410101|gb|ABQ38607.1| ABC transporter, Membrane component (putative high-affinity
           D-ribose transport protein) [Bradyrhizobium sp. BTAi1]
          Length = 346

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/319 (12%), Positives = 96/319 (30%), Gaps = 22/319 (6%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +L +L ++      L  G   + + +  +  Q  +  + A G++ V+   G + L+
Sbjct: 33  RAAGMLPVLLILCIGFHMLSEGRFFTGQNLGIVLQQAAVNTVLAAGMTFVI-LTGGIDLS 91

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A  A +  +  S+      L +P + +   A G++ G      R           
Sbjct: 92  VGSILAAAAMA-GLTLSKMPDLGTLWLPAAVLTGLAFGVVNGALIALLRLPPF------- 143

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                  ++    +T  +    +      +               + +   + + ++ + 
Sbjct: 144 -------IVTLGSLTAVRGLARLMGSDTTVFNPSIPYAFIGNASLTLIPGVVSIPWLSVI 196

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              +     L LRRT +      +  N+ A       +    +  + +S    G+ G   
Sbjct: 197 ALLVILGSWLILRRTVLGVHIYAVGGNESAARLAGIKVWAVLIFVYGMSGLLAGLGGGMQ 256

Query: 250 AASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNF 303
           AA     +      S  +  I+ VIL      GG+ S+        I+  +      +  
Sbjct: 257 AARLYAANGLQLGQSYELDAITAVILGGTSFVGGIGSIWGTLVGALIIAVLSNGLILVGV 316

Query: 304 YYFNSLLKFDCSFNMRHTT 322
                 +            
Sbjct: 317 SDIWQYVIKGLVIIGAVAL 335


>gi|89053917|ref|YP_509368.1| inner-membrane translocator [Jannaschia sp. CCS1]
 gi|88863466|gb|ABD54343.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Jannaschia sp. CCS1]
          Length = 406

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 90/308 (29%), Gaps = 23/308 (7%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I+ ++AV     +        + + I +       +++ A G  +++   G   L+   
Sbjct: 64  GIVGVIAVFIFFGVLAGDSGMFNAQGIMNWSQISAQFMIIAVGACMLM-VAGEFDLSVGS 122

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSL------KFRGDYLAIAT 126
                  S  + G  +GL +W+ I ++  I    G I G+  +                 
Sbjct: 123 MIGFAGISIAMFGVVWGLPMWVAILITFAICLVIGAINGIIVVRTGLPSFIVTLAFLFIL 182

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI-------- 178
              +      +     I   +             T V   +  +   +  +         
Sbjct: 183 RGFTIFVPQTVESRTIIGGIEEAAEGDWLAAIFNTDVAGWLFVWMADNGIIGTFSRGTRE 242

Query: 179 ---YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +  +++    L  +  + L RT   N       + +A   +   +   K++ F
Sbjct: 243 GEPLISGIPMLIVWAFILVIAGHIILTRTKFGNWIFAAGGDAQAARYVGVPVDRVKITMF 302

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAI 290
             ++    +            + D     E   +I++VI      GG  S+   A    I
Sbjct: 303 MTTAFCSTVFACCQVFEFGSAAADRGILKEFEAIIAVVIGGALLTGGYGSVMGAALGALI 362

Query: 291 LIGVVELC 298
              V +  
Sbjct: 363 FGVVQQGL 370


>gi|28870167|ref|NP_792786.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|28853413|gb|AAO56481.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 293

 Score = 53.3 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 91/305 (29%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A ++V L  R     W  +  
Sbjct: 8   LIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGAMVLFAALTFVSLLERGVPFFWAFLAT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A ++    +I  L           I  +    +   I    + +               
Sbjct: 68  LASMAVLALLIERLVLRPLVNRPPIILFMATLGLSYMIEGLAQALWGA------------ 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F  +       L  ++ +   RT I  + R + D+  
Sbjct: 116 QVHGLELGIPDEPLEIRGMLLSQFDLFAAGTAAALVIALSVLFNRTRIGLSLRAVADDPL 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +       +AV+     +AG  + A               +  + ++I+GG 
Sbjct: 176 ASLAVGIRLPRIWAVVWAVAGFVGLVAGLLWGARLGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S+        I+    +L          S ++              +   L +L+R   
Sbjct: 233 SSIGGAIVGGLIIGASEKLAEIYLGPIIGSGIENWVP---------YVLALLFLLVRPAG 283

Query: 339 LLRLR 343
           L   R
Sbjct: 284 LFGER 288


>gi|295675767|ref|YP_003604291.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295435610|gb|ADG14780.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 337

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/288 (11%), Positives = 85/288 (29%), Gaps = 12/288 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               +V  ++  L      +   + ++  +     + A G++ V+   G + L+     A
Sbjct: 27  LAGLIVLCIVGTLLNRDFATLDNLMNVLTRTSFIGIIAVGMTFVI-ISGGIDLSVGSMAA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       +       +       A+       I  + +      +     L++++    
Sbjct: 86  L----IAGIMIWLMNGLAAGATGHALPPLLIVTIGIVAAFVLGALFGCAHGLLITKGRIE 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             I           +          T   SL   +       ++ + +   +  +     
Sbjct: 142 PFIVTLGTLGIFRAVLTWLADGGALTLNDSLSNLYGPVYYASLFGVPVPIWVFLVVAAGG 201

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           ++IL   RTA     + I  N++        +   K+  + +    +G+A   +      
Sbjct: 202 ALILN--RTAFGRHVQAIGSNEQVARYAAIRVDTVKIVTYVLLGICVGVATVLYVPRLGS 259

Query: 256 ISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELC 298
            +P      E   + S+V+      GG   +        +L  +  + 
Sbjct: 260 ATPTTGLLWELEAIASVVVGGTALKGGEGRVIGTVIGAILLSVIANIL 307


>gi|226312174|ref|YP_002772068.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599]
 gi|226095122|dbj|BAH43564.1| ABC transporter permease protein [Brevibacillus brevis NBRC 100599]
          Length = 286

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 95/305 (31%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +  + A GL+++ G + +L+      +A GA++ V L       +  ++  
Sbjct: 8   LVNGLATGTLIFLLASGLTLIFGLMSVLNFAHGGLFAWGAFAGVWLFGVTDSFLLAIVGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +      ++  +      GD++    + +  +     +                    
Sbjct: 68  AVIGMLLGFVLERVLIRPVYGDHIQQLLVTLGGMLVISEL------------LKVFWSPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +I   +  +V+     +   + L L RT +    R    +++
Sbjct: 116 PIRAGLPDYLQGSIELGDIILITYRLFVIAVGIAVYVGLHLLLTRTRLGLIVRAGVIDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       F + +    + G+  A     I  +M      I+   +VI+GGM
Sbjct: 176 MVQALGINIKQVFTFVFLLGAGMAALGGSLLAPYSGVIFAEM-GMQYAILAFIVVIVGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++  +                            + ++ +  V+L++   
Sbjct: 235 GSVQGSMIAALLVGVLGSFMAYF--------------VPELSLAVNMLLMLAVLLIKPSG 280

Query: 339 LLRLR 343
           L   +
Sbjct: 281 LFGAK 285


>gi|73662702|ref|YP_301483.1| ribose ABC transporter [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72495217|dbj|BAE18538.1| ribose ABC transporter [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 313

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 93/297 (31%), Gaps = 25/297 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            A      + ++  Q+ I  + A+G++ V+   G + L+     A+ +    IL      
Sbjct: 32  SAFLEPSNLFNLLRQVSINGLIAFGMTFVI-LTGGIDLSVGSTLALSSALIAILMVSGVD 90

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S+  L+    + +    +      +        IATL    +F+ + +            
Sbjct: 91  SMIALLVGCILGAILGAI--NGLLITLGKMAPFIATLATMTVFRGLTLVITD-------- 140

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                    G  + +L   + F      Y + +    + M      + + L +T      
Sbjct: 141 ---------GNPITNLNGSYAFQLFGRGYFLGIPVPAVTMFITFIILYIILHKTIFGRQT 191

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N+KA F     +   K+  ++++     MAGA   +  +   P      E   + 
Sbjct: 192 YAMGGNEKAAFISGIKVNKLKIMIYSLAGLMSAMAGAILTSRLNSAQPTAGMSYELDAIA 251

Query: 271 SIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           ++V     + GG   +        I+  +      +    F   +       +    
Sbjct: 252 AVVLGGTSLTGGKGRILGTLIGVLIIGVLNNGLNLLGVSSFYQQVVKGVVIIIAVLI 308


>gi|227821489|ref|YP_002825459.1| hypothetical ABC-transporter permease protein [Sinorhizobium fredii
           NGR234]
 gi|227340488|gb|ACP24706.1| hypothetical ABC-transporter permease protein [Sinorhizobium fredii
           NGR234]
          Length = 298

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 88/270 (32%), Gaps = 2/270 (0%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
             +Y   A+G +I         L     +A    ++V+        +WL++P +  +   
Sbjct: 15  AALYAALAFGYAIAFAVTRRADLTYGALFAFAGQTFVLFADFGWDRLWLVLPAALGVGAV 74

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD-RLYFLGTTVR 164
             +  GL +    G Y+       S     +      I   +     +D R  +L   + 
Sbjct: 75  AALTFGLGAGLVVGRYVMRPLAFSSANAVVVASLGTLIVLMETARLASDTRSLWLPPFLN 134

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
            +I F+  P   V   +        M  L A     L  + +   WR + ++++A     
Sbjct: 135 EVIVFWPDPEFPVTLTMVQLLNTGLMAVLVAGGHWLLTHSYVGRYWRAVSEDREAAALCG 194

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                  + A+ V+S      G   A+    +   M   S  + V+ I  +GG T+    
Sbjct: 195 VDPSTVYILAYGVASLVAAFCGILAASYYGNMDFGM-GLSFGVKVLFIAAIGGQTAPLYA 253

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           A   A +  +  L        +     F  
Sbjct: 254 ALGAAGVGLLETLWSAYGPILWRDFAIFGF 283


>gi|13472949|ref|NP_104516.1| ribose ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
 gi|14023696|dbj|BAB50302.1| ribose ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
          Length = 353

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 22/303 (7%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           L        +   + S+ I  +  ++ A G + V+   G + L+      + A       
Sbjct: 53  LAFGATFVLNPFNLQSIAIFAVAPLLLATGQTFVI-ISGGIDLSLGFIMGLAAVIAAHAT 111

Query: 86  SRYGLSIWLLIPV-SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
           +  G +I L + + + +++      +           L +   I +     +      + 
Sbjct: 112 NMAGAAIPLPLAMLAGILASVIVAGVPGVINGLLISRLKVPPFIGTLGMFGVARGAAFLL 171

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
            G                    ++   F          + Y++L       ++   L +T
Sbjct: 172 AGGT---------------TVPVQNSWFALLGNGKFYGVPYLVLITVVFVIAMHYLLSQT 216

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                   I  N +A       I    L  + +S+   G+ GA +AA     +    +  
Sbjct: 217 RFGQHNYAIGANVQAARRAGIDIRGHILRLYVLSAMCAGLGGALYAARFTAGAAQAGEPL 276

Query: 265 ENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
               V ++VI      GG  ++        ++  +      +N   F   +       + 
Sbjct: 277 LLDSVAAVVIGGASLFGGSGTIFGTVAGALVIAVIQYGLVFVNVEPFWQFIAVGVVIIIS 336

Query: 320 HTT 322
              
Sbjct: 337 VLI 339


>gi|218461043|ref|ZP_03501134.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           Kim 5]
          Length = 373

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 81/304 (26%), Gaps = 20/304 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L +V             S   + ++        + A   ++++   G   L+     
Sbjct: 36  VAGLVLVIVFFFLTADSTMFSLSGLMTIMAPASQLGILAIAAALLM-IGGEFDLSIGSMV 94

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A     + ++ + +G  + + I ++ + +   G I G   +  R     +    +  +  
Sbjct: 95  AFAGLIFGVILTNFGQPLSVAIVMTMLFAAFMGAINGQIVIHTRLPSFIVTLAFLFILRG 154

Query: 135 NILIKWKPITNGKAGIYVADR--------------LYFLGTTVRSLIRFFRFPSSFVIYE 180
             L+  K  T G   +                            +         + +   
Sbjct: 155 LTLVGLKWATGGSTQLRGIGDHVKDSPLLGLFSGDALKGLFVWLADHDLIDKFPNGLPKV 214

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             +   +L    L+ +    L RT + N       +  A  +    +   K   FA+++ 
Sbjct: 215 TGIPVSVLWFVVLALAATWVLLRTRMGNWIFAAGGDPNAARNSGVPVHRVKTGLFALTAC 274

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVV 295
              +                    E   +I+ VI      GG  S         I   V 
Sbjct: 275 AAALVAIITVLDAGSTDARRGFQKEFEAIIAAVIGGCLLTGGYGSAIGAFFGAIIFGSVS 334

Query: 296 ELCC 299
               
Sbjct: 335 IGLT 338


>gi|126669166|ref|ZP_01740091.1| Branched-chain amino acid ABC-type transport system, permease
           components [Marinobacter sp. ELB17]
 gi|126626377|gb|EAZ97049.1| Branched-chain amino acid ABC-type transport system, permease
           components [Marinobacter sp. ELB17]
          Length = 219

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/173 (11%), Positives = 48/173 (27%), Gaps = 1/173 (0%)

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
           R       +     F    +  +        + +        +  ++ R+    A R + 
Sbjct: 40  RNVGFPLLIEGGFNFGSDGAFQMSLSYMQITIFVTTLICMTVLSTFISRSRTGRACRAVS 99

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
            +      L         + F + +A   +AG         +   +F F   +   +  +
Sbjct: 100 QDLGMANLLGIDTNRIISATFIIGAALAAVAGLLLGMYYGSVD-PLFGFIAGLKAFTAAV 158

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           LGG+ S+        IL     +  G     +  ++ F     +       + 
Sbjct: 159 LGGIGSIPGAMLGGLILGIAESMTSGYLSGEYKDVISFSLLILILLFKPTGLL 211


>gi|56478451|ref|YP_160040.1| putative ABC-transporter [Aromatoleum aromaticum EbN1]
 gi|56314494|emb|CAI09139.1| putative ABC-transporter [Aromatoleum aromaticum EbN1]
          Length = 288

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 99/304 (32%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL+++ G +G+++L     Y +GAY    L S  G     ++  
Sbjct: 10  LLNALQYGLLLFLVASGLTLIFGIMGIINLAHGSFYMMGAYMAFALTSATGNLFVAILLG 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + +    ++               + L   +    +L+ +  I   +    +      
Sbjct: 70  IVLSALIGFLLEWGL----------FSRLYKRDHLDQVLLTYGLILMFEEIRSMIVGDDV 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  +  ++      S  + Y ++  ++ +    L+  +   +R T +    R    N++
Sbjct: 120 HGLRIPDMLSASVQLSETLSYPVYRLFMSVVCIVLAVLMYWLIRHTRLGMMIRAGSSNRE 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL   I       FA+       AG   A                II   +V++GG+
Sbjct: 180 MVQSLGINIDLIYRLVFALGVTLAAFAGMLAAPVSSV--YPGMGNQVLIICFVVVVIGGV 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++         +   +                  + + +  V+L R   
Sbjct: 238 GSVWGALVAALLIGLADTFGKVIIPDFAG--------------LTVYLLMAAVLLWRPEG 283

Query: 339 LLRL 342
           + R 
Sbjct: 284 IFRR 287


>gi|330875490|gb|EGH09639.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 293

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 90/305 (29%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A ++V L  R     W  +  
Sbjct: 8   LIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGAMVLFAALTFVSLLERGVPFFWAFLAT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A +     +I  L           I  +    +   I    + +               
Sbjct: 68  LASMIVLALLIEKLVLRPLVNRPPIILFMATLGLSYVIEGLAQALWGA------------ 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F  +       L  ++ L   RT I  + R + D+  
Sbjct: 116 QVHGLELGIPDEPLEIRGMLLSQFDLFAAGTAATLVIALSLLFNRTRIGLSLRAVADDPL 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +       +AV+     +AG  + A               +  + ++I+GG 
Sbjct: 176 ASLAVGIRLPRIWAVVWAVAGFVGLVAGLLWGARLGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S+        I+    +L          S ++              +   L +L+R   
Sbjct: 233 SSIGGAIVGGLIIGASEKLAEIYLGPIIGSGIENWVP---------YVLALLFLLVRPAG 283

Query: 339 LLRLR 343
           L   R
Sbjct: 284 LFGER 288


>gi|300902686|ref|ZP_07120648.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 84-1]
 gi|301304907|ref|ZP_07211011.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 124-1]
 gi|331671015|ref|ZP_08371848.1| ribose ABC transporter, permease protein [Escherichia coli TA271]
 gi|300405268|gb|EFJ88806.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 84-1]
 gi|300839836|gb|EFK67596.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 124-1]
 gi|315253311|gb|EFU33279.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 85-1]
 gi|331061604|gb|EGI33530.1| ribose ABC transporter, permease protein [Escherichia coli TA271]
          Length = 342

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/320 (11%), Positives = 99/320 (30%), Gaps = 17/320 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  +          S++ I ++  ++ IY + A G++ V+ + G + L+     
Sbjct: 29  VLIFMILLLIFFQSQNSNFFSERNIFNILTEVSIYGIMAVGMTFVILTAG-IDLSVGSIL 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +   +    G +   + P +         +    ++     +L         + +
Sbjct: 88  AVCAMTAAYVIK--GDNFTTVDPNAWGGMSWLIGLGICLTMGTAIGFLHGL-----GVTR 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L  +     G         +   G  +    + +R+     +  I +   +  +  + 
Sbjct: 141 LRLPPFIVTLGGMTIWRGLTLVINDGAPIAGFDQGYRWWGRGELLGISIPIWIFAIVAIG 200

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + L   +T        I  N +A       +    +S + +     G+AG   +A   
Sbjct: 201 GYLAL--HKTRWGRFVYAIGGNPEAARLAGVNVKRVLVSVYVLIGCLAGLAGFILSARLG 258

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                    S  + VI+ V++GG +                 +   +      + L    
Sbjct: 259 SAEAVA-GISFELRVIASVVIGGTS------LMGGYGRIGGTIIGSIIMGILINGLVLMN 311

Query: 315 SFNMRHTTLMVIALFLVILM 334
                   +  + + L +  
Sbjct: 312 VSAYYQQIITGLIIVLAVAF 331


>gi|319761266|ref|YP_004125203.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|330823133|ref|YP_004386436.1| ABC transporter integral membrane subunit [Alicycliphilus
           denitrificans K601]
 gi|317115827|gb|ADU98315.1| inner-membrane translocator [Alicycliphilus denitrificans BC]
 gi|329308505|gb|AEB82920.1| ABC-type transporter, integral membrane subunit [Alicycliphilus
           denitrificans K601]
          Length = 309

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 93/309 (30%), Gaps = 16/309 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   +Y + A G  ++  + G+ +          A +           + +   +
Sbjct: 8   LIGGLMVGTLYALIAIGFVLIFKASGVFNFAQGAMVLFSALAMARFAEWIPGWLGMTPGL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT----NGKAGIYVAD 154
              +      +  +  + +  +  A+  L+  E    ++            G      A 
Sbjct: 68  VGNLLAIVVTLALMVVVAWVIERFALRHLVNQEPIALLMATLGIAYLLDGLGPMVFGSAV 127

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
               +G     +          V+  +   Y       L   + L+ ++T    A R + 
Sbjct: 128 YSINVGMPKDPVFVMDGLIEGGVMISLEDLYAACIAALLVVCLSLFFQKTKTGRALRAVA 187

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           D+ +A  S+   +    +  ++V+     + G  + +               +  + +VI
Sbjct: 188 DDHQAAQSIGIPLSRIWVIVWSVAGGVALVVGIIWGSKLGVQYSLS---LVALKALPVVI 244

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           LGG+TSL        I+    +L            ++   ++ +             +L+
Sbjct: 245 LGGLTSLPGAIIGGLIIGVGEKLSEVYIGPMVGGGIETWFAYGLA---------LCFLLV 295

Query: 335 RSHSLLRLR 343
           R   L   +
Sbjct: 296 RPQGLFGDK 304


>gi|15966728|ref|NP_387081.1| ABC transporter permease [Sinorhizobium meliloti 1021]
 gi|15076000|emb|CAC47554.1| Putative methionine ABC transporter, permease component
           [Sinorhizobium meliloti 1021]
          Length = 295

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 48/316 (15%), Positives = 108/316 (34%), Gaps = 26/316 (8%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
              +        +    I    Y + + GL+I+ G L +++      Y +GA+   +L S
Sbjct: 4   IFGIPLQAFLGQLLIGLINGSFYALLSLGLAIIFGLLRVINFAHGAQYMLGAFMAWLLLS 63

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             G+  W  + ++ ++ G  G ++    L+       +  L+ +      +        G
Sbjct: 64  YLGIGYWPALILAPLLVGLIGAVIERTMLRRLYTLDPLYGLLFTFGLALTIEGTFRYLYG 123

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            +G   A     +G               F+   I+  +V++    +     L + +T +
Sbjct: 124 ASGQPYATPALLMG----------GANLGFMFLPIYRGWVIVFSLVICLGTWLMIEKTKL 173

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
            +  R   +N     S    + F     + + +A   +AG   A         +   +  
Sbjct: 174 GSYLRAATENPVLVQSFGINVPFLLTLTYGLGAALAAIAGVLAAPIYQV--SPLMGSNII 231

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           I+V ++V++GGM S+        +L     L                  +      ++ +
Sbjct: 232 IVVFAVVVVGGMGSIMGAIVTGYLLGIAEGLTKVF--------------YPEASNIVIFV 277

Query: 327 ALFLVILMRSHSLLRL 342
            + +V+L+R   L   
Sbjct: 278 IMAIVLLLRPAGLFGR 293


>gi|152966900|ref|YP_001362684.1| inner-membrane translocator [Kineococcus radiotolerans SRS30216]
 gi|151361417|gb|ABS04420.1| inner-membrane translocator [Kineococcus radiotolerans SRS30216]
          Length = 283

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/154 (11%), Positives = 41/154 (26%), Gaps = 1/154 (0%)

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
               +       V  L        +          VL+    +  ++  ++RR+ +    
Sbjct: 98  PYVRQARENTAFVNPLPNVQVLEVAGFQIRSNQLIVLVAAIVMMIALDQFVRRSRLGRGV 157

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           R +  N +A   +           F +     G A   +      ++     F   I   
Sbjct: 158 RAVSQNPEAAALMGVNQKRVVQLTFFIGGLMAGAAALLYLVHIG-VTRYNVGFILGIKAF 216

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           +  +LGG+ ++        +L             
Sbjct: 217 TAAVLGGIGNIRGALVGGLVLGLAENYATFFGLA 250


>gi|165977357|ref|YP_001652950.1| D-xylose transport system permease protein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|165877458|gb|ABY70506.1| D-xylose transport system permease protein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
          Length = 375

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 47/357 (13%), Positives = 98/357 (27%), Gaps = 47/357 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L  + V+         GA  S + I ++  Q  I  + A G+  V+ S   + L+  
Sbjct: 12  YIMLIAIVVIMSFFSVATDGAYLSARNISNLLRQTSITGILAIGMVFVIISA-EIDLSVG 70

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI------- 124
               +      I    +G  + L I V+  +    G   G      +     +       
Sbjct: 71  SLMGLLGGFAAIADVWWGWPLPLTIAVTLALGTLLGAWNGWWVSYRKVPSFIVTLAGMLA 130

Query: 125 ----------------------------------ATLIMSEIFQNILIKWKPITNGKAGI 150
                                               L +  +F  +          K   
Sbjct: 131 FRGILIGLTNGTTVSPISNDMTAIGQGYIPDVTGMILGLVAVFCFVTWGTYQRKARKNLN 190

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                                     +     + + +L +  L+   +   R+TA     
Sbjct: 191 LNVPDATKDIMKYGLFAICVLGAIYLLNDYRGIPFPVLVLAILTVVGMFIARKTAFGRHI 250

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N +A       +   KL+ FA++   + +AG   +A     +P   + +E   + 
Sbjct: 251 YAIGGNIEAARLSGINVEKVKLTIFAINGFMVAIAGLILSARLGAGAPSAGQNAELDAIA 310

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + VI      GG+ S+  +     I+  +      ++   F   +       +    
Sbjct: 311 ACVIGGVSLAGGIGSVYGVIIGAFIIALLDNGMSMLDVPTFWQYIVKGAILLLAVWV 367


>gi|261402795|ref|YP_003247019.1| inner-membrane translocator [Methanocaldococcus vulcanius M7]
 gi|261369788|gb|ACX72537.1| inner-membrane translocator [Methanocaldococcus vulcanius M7]
          Length = 303

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 101/283 (35%), Gaps = 15/283 (5%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
              +  + +        +G+Y  + L   +G+  +L +PV  ++    G++  L      
Sbjct: 23  TYITTNVPNFAQGSYAIVGSYVALTLLKLFGICPYLSLPVLFIVGAIVGLLTYLALKPLI 82

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
               ++  L+++ +  ++++              ++ L  +  + ++   F     S   
Sbjct: 83  KRNASVEMLMIATLAIDLILLGVI-------GAYSEVLSQIVGSTQAKFVFANLDFSIFG 135

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
           +   ++   L +  L   + L L +T    A R   +N     ++   +   +L ++ +S
Sbjct: 136 FRGILFVSTLVVILLLFGLYLLLYKTKFGIALRASMENPSLAQTMGIDVEKTRLFSWILS 195

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
            A  G+AG      ++ +         +I   SIV  GG+  +S       I+     L 
Sbjct: 196 GALAGVAGGLLPFMQEIVPATGDLIIISIFAASIV--GGLRHISGALIGGYIIGISESLI 253

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                      + F   F +    + +I +   +L+  + +  
Sbjct: 254 TYYL------AMAFGAGFLVYGKVVSLIIMIATLLIAPYGITG 290


>gi|238027463|ref|YP_002911694.1| inner-membrane translocator [Burkholderia glumae BGR1]
 gi|237876657|gb|ACR28990.1| Inner-membrane translocator [Burkholderia glumae BGR1]
          Length = 340

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 89/313 (28%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +    L         +     ++  QI   V+ + G++ V+   G + L+     
Sbjct: 40  LAGALLAMIALFSALSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAG-IDLSVGSVL 98

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +   ++  +      +    +   G + G  ++ +R       +L + E  +
Sbjct: 99  ALAASVVSVAALQWHWAPLPAALLGMAAAALAGTVTGAVTVGWRIPSFI-VSLGVLEGAR 157

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  +         G                      F      + + +         + 
Sbjct: 158 GLAYQLTNSRTAYIGDA--------------------FDFLSNPFALGISPAFAIAVVVM 197

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT        I  N++A           K+  FA+  A  G+A  F  +  +
Sbjct: 198 LVAQFVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKIVVFALMGALAGLAALFQISRLE 257

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +      +        
Sbjct: 258 AADPNAGVGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGANEPTKR 317

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 318 IITGAVIVVAVVL 330


>gi|237797397|ref|ZP_04585858.1| ribose ABC transporter ATP-binding protein [Pseudomonas syringae
           pv. oryzae str. 1_6]
 gi|237805949|ref|ZP_04592653.1| ribose ABC transporter ATP-binding protein [Pseudomonas syringae
           pv. oryzae str. 1_6]
 gi|331020247|gb|EGI00304.1| ribose ABC transporter ATP-binding protein [Pseudomonas syringae
           pv. oryzae str. 1_6]
 gi|331027059|gb|EGI07114.1| ribose ABC transporter ATP-binding protein [Pseudomonas syringae
           pv. oryzae str. 1_6]
          Length = 325

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/322 (11%), Positives = 96/322 (29%), Gaps = 27/322 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LRL+     L L+ ++  L++        + +    +  Q  I  + A G++ V+     
Sbjct: 18  LRLSLDRFGLPLVFILLCLVMTFASEYFMTWRNWMDILRQTSINGILAVGMTYVI-LTKG 76

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A       ++ ++    +  +       +    +   + +      ++A  
Sbjct: 77  IDLSVGSILAFAGLCSALVATQGYGLLAAVSAGMFAGAMLGVVNGFMVANLSIPPFVATL 136

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            ++        ++                     G+ V  L   +       +  I +  
Sbjct: 137 GMLSIARGMTFILN-------------------DGSPVTDLPEEYLALGIGKLGPIGVPI 177

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++  +  L   ++L  R T        +  N+K+  +    +     S + VS    G+A
Sbjct: 178 IIFAVVALIFWMVL--RYTTYGRYVYAVGGNEKSARTSGIGVRKVMFSVYVVSGLLAGLA 235

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G   +A      P      E   + ++VI      GG  S+        ++  +      
Sbjct: 236 GVVLSARTTSALPQAGMSYELDAIAAVVIGGTSLSGGTGSIVGTLFGALLIGVINNGLNL 295

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +    +   +            
Sbjct: 296 LGVSSYYQQVAKGLIIVFAVLI 317


>gi|257055274|ref|YP_003133106.1| monosaccharide ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
 gi|256585146|gb|ACU96279.1| monosaccharide ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
          Length = 309

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 94/316 (29%), Gaps = 29/316 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+ +V  +L+ L  G    Q  I ++ ++     + A G ++V+   G L L+     
Sbjct: 8   LLLVVIVGSVLVSLRGGVLLDQGGISNILVRSTALGLVAIGQTMVI-LAGKLDLSVAYLV 66

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +       +     I   + ++ + +   G++ GL   + + +      +       
Sbjct: 67  GLSSLIAAETMAGDPAMIGPAVALTIVCAAGVGLVNGLVVTRLKVNAF----IATLGTGL 122

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I    +   +G AG       +     +                   +    + M  L+
Sbjct: 123 VIRGYLEDSYDGPAGNVPTAFQHLGYDRIGP-----------------VPVSTVLMLGLA 165

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                +L RT        +   ++             + A  + S   G+AG F A+   
Sbjct: 166 VLAWWFLTRTRPGYHVYAVGGGEEVARFSGIRTERIVVLAHVLCSVAAGLAGLFLASRLG 225

Query: 255 R-ISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
                       ++  I+ V+L      GG   ++       IL  +  +   +    F 
Sbjct: 226 AGAPWVGTDGGYDLESIAAVVLGGTILAGGRGGVAGTIGGVLILATLDTIFDELGVDSFF 285

Query: 308 SLLKFDCSFNMRHTTL 323
             +             
Sbjct: 286 KDVVRGVVLIAAVALY 301


>gi|167848152|ref|ZP_02473660.1| ABC transporter permease protein [Burkholderia pseudomallei B7210]
          Length = 327

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 92/311 (29%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 28  VLVLLCVGFGFMTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 86

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S      WL IP +  +  A G++ G      R     +    ++ +     
Sbjct: 87  A-VASLLASNLPGWGWLGIPAALAVGLAFGVVNGGLISFLRLPPFIVTLGALTAVRGIAR 145

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    +G           F        + + ++++    + A  
Sbjct: 146 L--------------------MGNDTTIFNPQLPFAFIGNGSILGVPWLVVIALAVVAIS 185

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +      +  N +A       +   +L  +A S    G+     AA     +
Sbjct: 186 WFILRRTVLGMRIYAVGGNPEAARLSGINVRGIELFVYASSGLLAGLGALMSAARLYAAN 245

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 246 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLSNGLVLLGVSDIWQYII 305

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 306 KGLVIIGAVAL 316


>gi|116254378|ref|YP_770216.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115259026|emb|CAK10136.1| transmembrane component of inositol ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 341

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 89/324 (27%), Gaps = 21/324 (6%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGI-QILIYVMFAWGLSIVVGSL 63
              L+ +  ++ +  +   L       +        ++ I Q+ +  + A G++ V+   
Sbjct: 22  PTELSIFLVLVGIALIYEVLGWMFIGQSFLMNSQRLTIMILQVSVIGIIAVGVTQVI-IT 80

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+      + A                              +  LP+       L 
Sbjct: 81  GGIDLSSGSVVGMTAMIATSFAQSSTWG-----------RAVFPSLTDLPAFVPIVVGLL 129

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           I           I     P      G++V+ R      T    +        F+  + + 
Sbjct: 130 IGAAAGLANGALIAYTKIPPFIATLGMFVSARGVAKWYTKGQPVSGITEQFHFIGTKAWP 189

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
             V L +        + LR T        I  N +A       I    +  + ++    G
Sbjct: 190 VVVFLVVA---LIFHIALRYTRYGKFTYAIGANPQAARVSGINIEAHLVKVYVIAGLLAG 246

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +AG   AA  +     M    E   + + VI      GG+  ++     T IL  +    
Sbjct: 247 LAGIVTAARAETAQASMGVGYELDAIAATVIGGTSLTGGVGRITGTVIGTIILGVMTSGF 306

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTT 322
             +    +   +            
Sbjct: 307 TFLRIDAYYQEIVKGLIIVAAVVI 330


>gi|148260368|ref|YP_001234495.1| monosaccharide-transporting ATPase [Acidiphilium cryptum JF-5]
 gi|146402049|gb|ABQ30576.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Acidiphilium cryptum JF-5]
          Length = 349

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/318 (10%), Positives = 88/318 (27%), Gaps = 19/318 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLF-LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           L+++ +I  L  ++  + +F +      S+    +     + Y++   G + V+   G +
Sbjct: 31  LSRHGEIWTLFILLALIAVFGIASPDFFSRASWLATSQFAVEYLLLGLGETFVI-ITGGI 89

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+      +      +            +  + + + A   +     +       A+  
Sbjct: 90  DLSVGAILGLSGMVGGL------------VMRALIHAHAANGVTIAAGIAAALASGALVG 137

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
            +   +   + +    +T G   I         G      I      +       +M   
Sbjct: 138 WVNGTLITRLRLTPFVVTLGMLSICTGGIYLLNGGRNVGTIPDIVGTAGSFAIGGWMPVT 197

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L          + L +T        +  N          +    +  + ++     +AG
Sbjct: 198 VLVAAVFCIICAVVLAQTRFGLRTYAVGSNPLGAGRAGIDVRRHLVRIYTLAGFLAAVAG 257

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
               A     S       E   + ++VI      GG  ++        ++  +V     +
Sbjct: 258 LMVMARFASASVQAGANDELDAITAVVIGGASLFGGRGTILGTVVGGFVITVMVTGLILI 317

Query: 302 NFYYFNSLLKFDCSFNMR 319
               F   +       + 
Sbjct: 318 GVQPFWQQVAVGAILILA 335


>gi|330963569|gb|EGH63829.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 293

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 90/305 (29%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A ++V L  R     W  +  
Sbjct: 8   LIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGAMVLFAALTFVSLVERSVPFFWAFLAT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A +     +I  L           I  +    +   I    + +               
Sbjct: 68  LASMIVLALLIERLVLRPLVNRPPIILFMATLGLSYVIEGLAQALWGA------------ 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F  +       L  ++ L   RT I  + R + D+  
Sbjct: 116 QVHGLELGIPDEPLEIRGMLLSQFDLFAAGTAATLVIALSLLFNRTRIGLSLRAVADDPL 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +       +AV+     +AG  + A               +  + ++I+GG 
Sbjct: 176 ASLAVGIRLPRIWAVVWAVAGFVGLVAGLLWGARLGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S+        I+    +L          S ++              +   L +L+R   
Sbjct: 233 SSIGGAIVGGLIIGASEKLAEIYLGPIIGSGIENWVP---------YVLALLFLLVRPAG 283

Query: 339 LLRLR 343
           L   R
Sbjct: 284 LFGER 288


>gi|326389322|ref|ZP_08210890.1| inner-membrane translocator [Thermoanaerobacter ethanolicus JW 200]
 gi|325994685|gb|EGD53109.1| inner-membrane translocator [Thermoanaerobacter ethanolicus JW 200]
          Length = 318

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 84/312 (26%), Gaps = 27/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V   ++  +          + ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 23  LIGLVGLIVVFSILSPRFLDYYNLTNVLRQTSLNAIMAVGMTFVI-LTGGIDLSVGSILA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             +     +       I  ++    + +G       +        ++A   ++       
Sbjct: 82  FSSAITAGMLKDGSPLIIAVLAGLIIGTGLGFFNGFVIIRWNIPPFIATFAMMTIARGLT 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           ++        G  G                      F      Y   +   ++    +  
Sbjct: 142 LVYTNGQPITGLGG---------------------AFGYIGNGYIGPIPVPIILTVLIFV 180

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L+   +         N +A            L  +++S     ++G    +  + 
Sbjct: 181 VGYYILKNNRLGRYVYATGGNIQAAKLAGINTNNIILFVYSLSGFLAAISGLIITSRLNS 240

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            +P   + +E   + ++V     + GG   +        I+  +      +N   F  L+
Sbjct: 241 AAPTAGQGAELDAIAAVVLGGTSLSGGEGGVIGTLIGALIIGILNNGLNLLNVSPFYQLI 300

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 301 AKGAVILLAIAL 312


>gi|33603542|ref|NP_891102.1| branched-chain amino acid transport system permease protein
           [Bordetella bronchiseptica RB50]
 gi|33577666|emb|CAE34931.1| branched-chain amino acid transport system permease protein
           [Bordetella bronchiseptica RB50]
          Length = 290

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 85/306 (27%), Gaps = 27/306 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +         Y M A  +++V   + +++      + +GA+   +     GLS+WL  P+
Sbjct: 8   LIYGLSVGSTYAMIALAITLVFRGMDIINFAQGEIFMVGAFLGYVFHVDLGLSMWLAFPL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +   +   G  +    ++   +   ++  +M+     +L     +  G +          
Sbjct: 68  AIASALVFGSFLERMFMRRLENSNQLSLFMMTVALFILLRSAAQLVFGSSAYRFPP---- 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +         V        V+     +   + L   RT +  + R +  ++ 
Sbjct: 124 --------LSEHAASIGSVRISDQYLIVIGMTLLIMLLLYLLFTRTPLGLSVRAVAQDKT 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +        A+ SA    AG  +A                            
Sbjct: 176 TARMMGINVSRINNFTVALCSALGAAAGIVYAPIAVLSFDMGNLIMLKGF---------- 225

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                 A     L  +     G                +     +    L L+IL++ + 
Sbjct: 226 -----TAALLGGLGLLSGAVLGGIMLGVIEQFGTLLINSAYKDLVSFSILLLIILVKPNG 280

Query: 339 LLRLRT 344
           +L  + 
Sbjct: 281 ILGKKQ 286


>gi|289424333|ref|ZP_06426116.1| amino acid or sugar ABC transport system, permease protein
           [Propionibacterium acnes SK187]
 gi|289155030|gb|EFD03712.1| amino acid or sugar ABC transport system, permease protein
           [Propionibacterium acnes SK187]
 gi|332674415|gb|AEE71231.1| ribose ABC transporter [Propionibacterium acnes 266]
          Length = 325

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +   I ++GIQ  +  + A+G++ V+ + G + L+     
Sbjct: 27  ALVGLIILCIALFIATPVFLTVPNIINIGIQAAVVAIMAFGMTFVIVTSG-IDLSVGSVA 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A     + S  GL  WL + +  +I    G + GL     +                
Sbjct: 86  ALSAMVSAWMFSNAGLPGWLTLIIGLLIGLLAGAVSGLAIAYGKLPAFI----------- 134

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  + +      +        +   ++ +    
Sbjct: 135 -----------ATLAMMSVARGLTLVISGGTPVATSDAVNQLGADVGPIPVPVIMLALAG 183

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N++A       +    ++ +A++  F G+AG   A    
Sbjct: 184 VVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALAGVFAGLAGLVLAGRLS 243

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLS-----KIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI G   S              +L  +      +N   F   
Sbjct: 244 SAQPQAGFGYELDAIAAVVIGGASLSGGSGKASGTFIGAVLLAVIRNGLNILNVTSFWQQ 303

Query: 310 LKFDCSFNMR 319
           +   C   + 
Sbjct: 304 VVIGCVIALA 313


>gi|258510709|ref|YP_003184143.1| inner-membrane translocator [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257477435|gb|ACV57754.1| inner-membrane translocator [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 314

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/325 (9%), Positives = 89/325 (27%), Gaps = 29/325 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +  L +  +++ L++            + ++ + I    + A G  +V+     + 
Sbjct: 5   LKRREFSLVVFILIFLLVMLFVTPRFLQLGNLINILLNISTVGILAMGQCLVI-ITKGID 63

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIW-LLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           L+      +       L      +   + I V+  +       + +  L+     + + T
Sbjct: 64  LSVGANMGLVTLVVGTLLLNGVPTWLSIAIGVATGLVCGGLNAVLISLLRLPPIIVTLGT 123

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L +      ++   + I N  +          +G     ++         V         
Sbjct: 124 LSLFSGLMYMVTNGQWIQNLPSSFLAIGNSKVVGIPGPVIVLVIVLIVLSV--------- 174

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
                        ++ +T +      + +N  A      +     +  + +     G+AG
Sbjct: 175 -------------FMEQTVLGRYIYAVGNNPNAARLAGLSTNRTIIVPYVLMGLLAGIAG 221

Query: 247 AFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
             + +     +P          + + V     + GG  +         +L  + E     
Sbjct: 222 VLYLSYNGFSTPTTGADLNLESIAAAVIGGTNVFGGRGTALGSVLGAVLLGVITEALVFF 281

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVI 326
           +     +         +       +
Sbjct: 282 HLPAVWNDAVEGLIILIAVIADSGL 306


>gi|222102529|ref|YP_002539568.1| ABC transporter membrane spanning protein (branched chain amino
           acid) [Agrobacterium vitis S4]
 gi|221739130|gb|ACM39863.1| ABC transporter membrane spanning protein (branched chain amino
           acid) [Agrobacterium vitis S4]
          Length = 293

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 86/306 (28%), Gaps = 24/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   +Y + A G  ++  + G+ +          A +YV L  +   +   +   
Sbjct: 8   LIGGLLAGTMYSLVAIGFVLIYKASGVFNYAQGSLLLFAALTYVTLTDQGVPAFGAIAVT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A++      I  L              +    +   +    + I               
Sbjct: 68  IALLILTAIAIEKLLLRPLTNRSPMTLFMATLGLSYVVEGVAQGIMGS------------ 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F          +   + L   +T I    R++ D+ +
Sbjct: 116 QVRALDLGIEDLPIFLGDIMISQFDLIAAGVALAIVVILSLLFSKTRIGIQLRSVADDTR 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   I      A+AV+     +AG  + A +             +  + ++I+GG 
Sbjct: 176 AALSIGININRIWQIAWAVAGLVGLVAGLLWGARQGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+     L       +    +    +              + + +R   
Sbjct: 233 TSIPGAIVGGLIVGAGESLAETYLGPFLGGGITPWFA---------YALALVFLFIRPAG 283

Query: 339 LLRLRT 344
           L   R 
Sbjct: 284 LFGERQ 289


>gi|13471820|ref|NP_103387.1| permease protein of sugar ABC transporter [Mesorhizobium loti
           MAFF303099]
 gi|14022564|dbj|BAB49173.1| permease protein of sugar ABC transporter [Mesorhizobium loti
           MAFF303099]
          Length = 328

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/314 (12%), Positives = 89/314 (28%), Gaps = 25/314 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              +L +   V  ++  L      S     ++G Q  +  + A G++ V+     + L+ 
Sbjct: 29  RPYMLYVAFAVMLIVFSLASPWFLSIDNFLNIGRQTTLVSIIAVGMTFVI-ISRQIDLSV 87

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A+   S  +  +    +  +            G++ G+ + +              
Sbjct: 88  ASTLALSGMSASLAMAFVANNWVVGAAAGLGTGALIGLLNGVLTTRLEIPSF-------- 139

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                       +T G         L    T    +   + F        + +   +L  
Sbjct: 140 -----------LVTLGTLSGARGLALMVTNTKPVIITNEYYFAIFGEGSVLGIPAPILWT 188

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++ + IL L  +           N  A       I      AF ++    G+A    +
Sbjct: 189 LGVTIAGILLLHYSVYGRRVYAAGGNPTAALYSGVHIKQVTTLAFVLTGTLAGLASLILS 248

Query: 251 ASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A      PD+ +  E  ++ S++     + GG   +      + I+  +      +    
Sbjct: 249 ARSHAARPDVVQGMELDVIASVILGGCSLFGGRGFVLGTLLGSLIIGTLNNGLVLLGVSS 308

Query: 306 FNSLLKFDCSFNMR 319
              L+         
Sbjct: 309 SLQLVIKGAIIVAA 322


>gi|239625840|ref|ZP_04668871.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239520070|gb|EEQ59936.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47FAA]
          Length = 338

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 41/314 (13%), Positives = 97/314 (30%), Gaps = 16/314 (5%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +  +  +V  +  ++F         + S+          A G++ V+   G + L+    
Sbjct: 25  VAVIALIVLFMFFWIFGDNFAKYSTLVSIFDSSYYIGFMAIGVTFVI-ITGGIDLSIGTV 83

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
               +     L ++ GL + L + ++ ++ G  G+  GL     R          M    
Sbjct: 84  CICCSLISGTLYTKLGLPMPLCVILAILMGGLFGLANGLMVSVMRLPAFIATLGTMM--- 140

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
              + +               +    G + R + +                 +++    +
Sbjct: 141 ---ITRGLGSIVTNTATVTFPQASAPGGSFRGIFKLKGAGLPQAGIPTGFILLIVLAILM 197

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  +     +        ++  N++A       ++  +  A+ +S  F G+AG  +AA  
Sbjct: 198 AILL----NKARPGRYILSLGSNKEATRLSGVNVVKWETLAYVISGLFAGLAGVSYAAVY 253

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
             + P      E   +  +VI      GG+ S+S       I+  +      +       
Sbjct: 254 STLMPGTGNGFELDAIAGVVIGGTSLAGGVGSISGTLIGVFIMSVLKTGLPFVGVQPHYQ 313

Query: 309 LLKFDCSFNMRHTT 322
           LL       +    
Sbjct: 314 LLITGFVLIIAVFV 327


>gi|167736462|ref|ZP_02409236.1| branched chain amino acid ABC transporter, ATP-binding/permease
           protein [Burkholderia pseudomallei 14]
          Length = 310

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 55/312 (17%), Positives = 110/312 (35%), Gaps = 23/312 (7%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +    +  Y        L   + A G++++   LGL+ L+    + +G +   +  +  G
Sbjct: 1   VVPAVADAYWIKTLTSALTVSIAAAGVALLYRQLGLVCLSQHALFGVGGWI-ALRLAHLG 59

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
               L +   A    A GMI GLP+L+ RG YLA+ TL+M+  FQ ++        G   
Sbjct: 60  APFELCVLAGAAGGSAIGMIAGLPALRLRGLYLALVTLMMAGGFQVVVSAIGFPDGGGG- 118

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                        +    R           +   +  +     L+ ++I   RR+    +
Sbjct: 119 ---------FTGHLSFGARQMMARPLVGQSDAAYFRYVAAWAALAFALIELHRRSKAGRS 169

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
           W  IR  +    +    ++  +  AF ++    G++G   A S  ++    F  SE++++
Sbjct: 170 WALIRRGEMPALAAGVNVVLYQTWAFGLAGLLAGLSGGLLAGSVGQLDGRAFAASESVLL 229

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            ++ ++GG+           +L  V  L                             AL 
Sbjct: 230 FALSVVGGVYHWFGALITGLLLRAVPALLTDFG------------VNGYLAMIFFGAALL 277

Query: 330 LVILMRSHSLLR 341
             ++     +  
Sbjct: 278 HALVTAPAGIAG 289


>gi|307298927|ref|ZP_07578729.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915352|gb|EFN45737.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 296

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 97/311 (31%), Gaps = 21/311 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           + I S       Y +   G+  +  ++  ++   + +  +GAY +    ++  L  ++  
Sbjct: 7   QNIVSGASIGATYGLVGLGVVFLWLTISRINFANISSAMLGAYLFYSFYTQLNLGFFISF 66

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +S  I G  G+ + +   +          L        +   W        G       
Sbjct: 67  VLSIAIIGLYGLGLRIFIYEPIRKR-GGGRLEFVVATLMLCTFWLNFIIVTYGALPKPFP 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
              G +              +        + L +  L   I   L +T I  ++R    N
Sbjct: 126 PVFGGSND------FISLGGIRIPSLYLNIYLVIAILMVFIYFILNKTLIGKSFRAAAQN 179

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++A   +   +      +F +++  +G+AG   A     +S ++   S  +   +  +LG
Sbjct: 180 REAAALMGIDVKVTTSLSFILATVVVGIAGILLAP-IYFVSLELGGGSIGVKGFASAVLG 238

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+T+          L  +           +  ++ F               L  V++++ 
Sbjct: 239 GLTNPYGTILGGISLGLLENFSTLYISSTYRDVISFS-------------VLVAVLILKP 285

Query: 337 HSLLRLRTPSN 347
             +   +    
Sbjct: 286 SGIFNWKRKKI 296


>gi|330967465|gb|EGH67725.1| inner-membrane translocator [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 325

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/322 (11%), Positives = 96/322 (29%), Gaps = 27/322 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LRL+     L L+ ++  +++        + +    +  Q  I  + A G++ V+     
Sbjct: 18  LRLSLDRFGLPLVFILLCVVMAFASEYFMTWRNWMDILRQTSINGILAVGMTYVI-LTKG 76

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A       ++ ++    +  +       +    +   + +      ++A  
Sbjct: 77  IDLSVGSILAFAGLCSALVATQGYGLLAAVSAGMFAGAMLGVVNGFMVANLSIPPFVATL 136

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            ++        ++                     G+ V  L   +       +  I +  
Sbjct: 137 GMLSIARGMTFILN-------------------DGSPVTDLPEEYLALGVGKVGPIGVPI 177

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++  +  L   ++L  R T        +  N+K+  +    +     S + VS    G+A
Sbjct: 178 IIFAVVALIFWMVL--RYTTYGRYVYAVGGNEKSARTSGIGVRKVMFSVYVVSGLLAGLA 235

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G   +A      P      E   + ++VI      GG  S+        ++  +      
Sbjct: 236 GVVLSARTTSALPQAGMSYELDAIAAVVIGGTSLSGGTGSIVGTLFGALLIGVINNGLNL 295

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +    +   +            
Sbjct: 296 LGVSSYYQQVAKGLIIVFAVLI 317


>gi|222106406|ref|YP_002547197.1| ABC transporter membrane spanning protein (ribose) [Agrobacterium
           vitis S4]
 gi|221737585|gb|ACM38481.1| ABC transporter membrane spanning protein (ribose) [Agrobacterium
           vitis S4]
          Length = 348

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/326 (12%), Positives = 94/326 (28%), Gaps = 26/326 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFL----FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
           R+ +    + L A++    ++           S     S+ +  +  ++ A G + V+  
Sbjct: 25  RIAQLRAWVFLAALIVIFEIWAQTDFGGTFVGSPFNWQSVAVFAVAPLLLAIGQTFVI-I 83

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL-LIPVSAMISGACGMIMGLPSLKFRGDY 121
            G + L+      + A       + +G+ + L    V  ++       +           
Sbjct: 84  SGGIDLSAGFIMGLAAVVAAHATNYFGVFMPLPAAMVCGILVAILAATIPGIINGLLISR 143

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           L +   I +     +      +  G                    ++   F +       
Sbjct: 144 LNVPPFIGTLGMFGVARGAAFLLAGGT---------------TVPVKNSYFAALGNGRIE 188

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            + Y++L        +   L +T        I  N +A       I    L  + +SS  
Sbjct: 189 GIPYLVLVTAVFVLFMHYILSQTRFGQHNYAIGANAQASRRAGIDIKGHILRLYILSSVC 248

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+ GA +AA     +    +      V ++VI      GG  ++        ++  +  
Sbjct: 249 AGLGGALYAARFTAGAAQAGEPLLLDSVAAVVIGGASLFGGSGTIIGTVAGALVIAVIQY 308

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               MN   F   +       +    
Sbjct: 309 GLVFMNVEPFWQFIAVGVVIIISVLI 334


>gi|149916233|ref|ZP_01904754.1| branched-chain amino acid ABC transporter (permease) [Roseobacter
           sp. AzwK-3b]
 gi|149809893|gb|EDM69744.1| branched-chain amino acid ABC transporter (permease) [Roseobacter
           sp. AzwK-3b]
          Length = 289

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 98/302 (32%), Gaps = 27/302 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +         + A GL ++ G +G+++      Y  GAY+ V++ + + +  +L + + 
Sbjct: 10  LNAVYAASYISLIAVGLVLIFGVMGVINFAHGELYMAGAYTVVLMYTDFQVPFFLAVAMG 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +  GA G+ M     +   D      +        +                       
Sbjct: 70  LIFVGALGLAMERALFRPLRDNPLGGLVASIGFLMILQAVAAMGFG------------VR 117

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +  + +     S  V   +   YV++    L +++ ++L++T    A R    + +A
Sbjct: 118 MEHIAPVTQAVIEFSDRVRLPVARLYVIIAAVVLLSALWIFLKKTRFGWALRAAAQDPEA 177

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
                 +I      A  + +   G+AGA  A             S  I    ++I+GG+ 
Sbjct: 178 AALQGISIKQTARIAMFIGAGLAGIAGALTAPLVSV--NPHMGHSVIITAFIVIIVGGVG 235

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           SL     A+     +              ++                 + LV++++   L
Sbjct: 236 SLEGAVVASVAYAIIHTFVTTFYDGVIADIVGLS-------------LMLLVLIVKPTGL 282

Query: 340 LR 341
             
Sbjct: 283 FG 284


>gi|33866971|ref|NP_898530.1| putative urea ABC transporter [Synechococcus sp. WH 8102]
 gi|33639572|emb|CAE08956.1| putative urea ABC transporter [Synechococcus sp. WH 8102]
          Length = 384

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/191 (10%), Positives = 54/191 (28%), Gaps = 9/191 (4%)

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
                       + + +    +++        +  +L ++      R +  N+     L 
Sbjct: 195 PKWMRGGMEWMDITFPVPRLVIIVITIVAVVGVTWFLNKSVWGMRIRAVTQNRAMSDCLG 254

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                  +  F + S   G+AG   A S           S  +    +V+LGG+ +L   
Sbjct: 255 IPTQTVDVLTFGIGSGLAGVAGV--AVSLLGSVGPNVGGSYIVGCFMVVVLGGVGNLLGT 312

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT-------TLMVIALFLVILMRSH 337
             A+  +  + +L            +    +  +           ++   + + +  R  
Sbjct: 313 VLASFAIGWLTDLIGAGRLLTMWPDMPSPLAAAVEFFATTSMAQVMVFALIVVFLQFRPA 372

Query: 338 SLLRLRTPSNF 348
            L   +     
Sbjct: 373 GLFPQKGRMVE 383


>gi|46143597|ref|ZP_00134917.2| COG4214: ABC-type xylose transport system, permease component
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126209371|ref|YP_001054596.1| xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae L20]
 gi|126098163|gb|ABN74991.1| Xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 375

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 48/357 (13%), Positives = 100/357 (28%), Gaps = 47/357 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L  + V+         GA  S + I ++  Q  I  + A G+  V+ S   + L+  
Sbjct: 12  YIMLIAIVVIMSFFSVATDGAYLSARNISNLLRQTSITGILAIGMVFVIISA-EIDLSVG 70

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI------- 124
               +      I    +G S+ L I V+ ++    G   G      +     +       
Sbjct: 71  SLMGLLGGFAAIADVWWGWSLPLTIAVTLVLGTLLGAWNGWWVSYRKVPSFIVTLAGMLA 130

Query: 125 ----------------------------------ATLIMSEIFQNILIKWKPITNGKAGI 150
                                               L +  +F  +          K   
Sbjct: 131 FRGILIGLTNGTTVSPISNDMTAIGQGYIPDVTGMILGLVAVFCFVTWGTYQRKARKNLN 190

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                                     +     + + +L +  L+   +   R+TA     
Sbjct: 191 LNVPDATKDIMKYGLFAICVLGAIYLLNDYRGIPFPVLVLAILTVVGMFIARKTAFGRHI 250

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N +A       +   KL+ FA++   + +AG   +A     +P   + +E   + 
Sbjct: 251 YAIGGNIEAARLSGINVEKVKLTIFAINGFMVAIAGLILSARLGAGAPSAGQNAELDAIA 310

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + VI      GG+ S+  +     I+  +      ++   F   +       +    
Sbjct: 311 ACVIGGVSLAGGIGSVYGVIIGAFIIALLDNGMSMLDVPTFWQYIVKGAILLLAVWV 367


>gi|331015521|gb|EGH95577.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 293

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 90/305 (29%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A ++V L  R     W  +  
Sbjct: 8   LIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGAMVLFAALTFVCLLERGVPFFWAFLAT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A +     +I  L           I  +    +   I    + +               
Sbjct: 68  LASMIVLALLIERLVLRPLVNRPPIILFMATLGLSYMIEGLAQALWGA------------ 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F  +       L  ++ L   RT I  + R + D+  
Sbjct: 116 QVHGLELGIPDEPLEIRGMLLSQFDLFAAGTAAALVIALSLLFNRTRIGLSLRAVADDPL 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +       +AV+     +AG  + A               +  + ++I+GG 
Sbjct: 176 ASLAVGIRLPRIWAVVWAVAGFVGLVAGLLWGARLGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S+        I+    +L          S ++              +   L +L+R   
Sbjct: 233 SSIGGAIVGGLIIGASEKLAEIYLGPIIGSGIENWVP---------YVLALLFLLVRPAG 283

Query: 339 LLRLR 343
           L   R
Sbjct: 284 LFGER 288


>gi|303250296|ref|ZP_07336495.1| D-xylose transport system permease protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307253602|ref|ZP_07535469.1| Xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302650766|gb|EFL80923.1| D-xylose transport system permease protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306858838|gb|EFM90884.1| Xylose transport system permease protein xylH [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 375

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 47/357 (13%), Positives = 97/357 (27%), Gaps = 47/357 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L  + V+         GA  S + I ++  Q  I  + A G+  V+ S   + L+  
Sbjct: 12  YIMLIAIVVIMSFFSVATDGAYLSARNISNLLRQTSITGILAIGMVFVIISA-EIDLSVG 70

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI------- 124
               +      I    +G  + L I V+  +    G   G      +     +       
Sbjct: 71  SLMGLLGGFAAIADVWWGWPLPLTIAVTLALGTLLGAWNGWWVSYRKVPSFIVTLAGMLA 130

Query: 125 ----------------------------------ATLIMSEIFQNILIKWKPITNGKAGI 150
                                               L +  +F  +          K   
Sbjct: 131 FRGILIGLTNGTTVSPISNDMTAIGQGYIPDVTGMILGLVAVFCFVTWGTYQRKARKNLN 190

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                                     +     + + +L +  L+   +   R+TA     
Sbjct: 191 LNVPDATKDIMKYGLFAICVLGAIYLLNDYRGIPFPVLVLAILTVVGMFIARKTAFGRHI 250

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N  A       +   KL+ FA++   + +AG   +A     +P   + +E   + 
Sbjct: 251 YAIGGNIDAARLSGINVEKVKLTIFAINGFMVAIAGLILSARLGAGAPSAGQNAELDAIA 310

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + VI      GG+ S+  +     I+  +      ++   F   +       +    
Sbjct: 311 ACVIGGVSLAGGIGSVYGVIIGAFIIALLDNGMSMLDVPTFWQYIVKGAILLLAVWV 367


>gi|300716739|ref|YP_003741542.1| sugar ABC transporter permease [Erwinia billingiae Eb661]
 gi|299062575|emb|CAX59694.1| probable sugar ABC transporter, permease protein [Erwinia
           billingiae Eb661]
          Length = 323

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/322 (11%), Positives = 89/322 (27%), Gaps = 27/322 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++ N  D    +  ++  +          +   + ++  Q  I  + A G+++V+   G 
Sbjct: 17  IKFNVRDAGTLIGLLIIVITFSFLSPVFFTLPNLLNILQQSSINALIAMGMTLVI-ISGG 75

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+ A     L          +I    + +        L +      Y  + 
Sbjct: 76  IDLSVGPTAALSAVLGATLMVSGVPVPLAIIATLGVGAVCGVFSGSLIA------YAGLQ 129

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
             I++    ++      I  G   ++     +                   VI  +    
Sbjct: 130 PFIVTLGGLSLFRAIALIYTGGNPVFGIPSEFRSIINSSIFSIPTPIIIVAVIAVV---- 185

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
                      +   + +T +      I  N++A       +   K++ + +S     +A
Sbjct: 186 -----------LWTVMNKTPLGEFILAIGGNEEAARVAGVPVKRTKVTVYVISGTLASLA 234

Query: 246 GAFFAASRDRISPDMFKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
                       P +    E        +    ++GG  S+        IL  +      
Sbjct: 235 SLILIGRLGAAEPTIGNLWELDAIAAAAIGGASLMGGKGSMFGTIIGVIILGALRNGLTL 294

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +N   F  LL       +    
Sbjct: 295 LNIQAFYQLLATGLIIIIAMLI 316


>gi|296104141|ref|YP_003614287.1| ribose transport system permease protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295058600|gb|ADF63338.1| ribose transport system permease protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 342

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/320 (11%), Positives = 99/320 (30%), Gaps = 17/320 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  +          S++ I ++  ++ IY + A G++ V+ + G + L+     
Sbjct: 29  VLIFMILLLIFFQSQNSNFFSERNIFNILTEVSIYGIMAVGMTFVILTAG-IDLSVGSIL 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +   +    G +   + P +         +    ++     +L         + +
Sbjct: 88  AVCAMTAAYVIK--GDNFTTVDPNAWGGMSWLIGLGICLAMGTAIGFLHGL-----GVTR 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L  +     G         +   G  +    + +R+     +  I +   +  +  + 
Sbjct: 141 LRLPPFIVTLGGMTIWRGLTLVINDGAPIAGFDQGYRWWGRGELLGISIPIWIFAIVAVG 200

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + L   +T        I  N +A       +    +S + +     G+AG   +A   
Sbjct: 201 GYLAL--HKTRWGRFVYAIGGNPEAARLAGVNVKRVLVSVYVLIGCLAGLAGFILSARLG 258

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                    S  + VI+ V++GG +                 +   +      + L    
Sbjct: 259 SAEAVA-GISFELRVIASVVIGGTS------LMGGYGRIGGTIIGSIIMGILINGLVLMN 311

Query: 315 SFNMRHTTLMVIALFLVILM 334
                   +  + + L +  
Sbjct: 312 VSAYYQQIITGLIIVLAVAF 331


>gi|284029655|ref|YP_003379586.1| inner-membrane translocator [Kribbella flavida DSM 17836]
 gi|283808948|gb|ADB30787.1| inner-membrane translocator [Kribbella flavida DSM 17836]
          Length = 348

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 43/325 (13%), Positives = 110/325 (33%), Gaps = 10/325 (3%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L++ +    + A V  +   +     +      ++  Q  +  + A  +S+++   G   
Sbjct: 25  LSRPEIGSLVGAAVILVFFLVTAEPFRDLNNAGTILYQASLIGVMAVPVSLLM-IGGEFD 83

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A   G  +  I   ++ +++W+ + V+ +++ A G+  G   ++       + TL
Sbjct: 84  LSAGVAVTTGGLTAGIFAYQFSVNVWVGMAVALVLALAIGLFNGWLLMRTGLPSF-LVTL 142

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I Q + +    +T+G         +    +          F S F +  + +  ++
Sbjct: 143 GTFFILQGLNVAVTRLTSGAVASNSISDMDGFTSAKA------LFASEFKLGGLTIKIIV 196

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +      A     L RT I N    +  +  +  ++   +   K+  F     F    G 
Sbjct: 197 VWWTVFVAIAAWMLLRTKIGNWIFAVGGDAASARAVGVPVKKVKIGLFMTVGFFAWFTGM 256

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGG--MTSLSKIAKATAILIGVVELCCGMNFYY 305
                ++ +        +  + I   ++GG  +T         A+   +  +      Y 
Sbjct: 257 QLLFVQNGVVQSGEGVGKEFLYIIAAVVGGCLLTGGYGSVVGGAVGALIFGMVQLGVVYA 316

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFL 330
             +   F            ++ L +
Sbjct: 317 GWNPDWFKAFLGAMLLLATIVNLVV 341


>gi|284028249|ref|YP_003378180.1| inner-membrane translocator [Kribbella flavida DSM 17836]
 gi|283807542|gb|ADB29381.1| inner-membrane translocator [Kribbella flavida DSM 17836]
          Length = 341

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 87/294 (29%), Gaps = 23/294 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               S + I  + +   I  + A G ++VV     + L+      + A++   L      
Sbjct: 43  PRFLSAQSIRDILLGTAILAVLAVGQAVVV-ITRNIDLSVGSVLGLSAFTVGTLLRDNPG 101

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              ++  ++    G     +    +++      + TL    + + I   W          
Sbjct: 102 LPVVVALLAGAAVGGACGTVNGVLVRYGNVPALVVTLGTLYVVRGITYFWAG-------- 153

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                    G  + +      F        + + +++L    +     L LR        
Sbjct: 154 ---------GQQINADELPSGFLDFGNATLLGVPFLVLIAVVVLVVTGLVLRNYRAGREL 204

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  + +A       +    + AF VS A  G+AG  FAA    I        E  +V 
Sbjct: 205 YAMGSSPQAAELAGIPVGRRTVLAFLVSGALAGLAGVLFAARFGTIDAAAGTGYELNVVA 264

Query: 271 SIVILGGM-----TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           ++V+ G        S+   A    +L  +      +    F           + 
Sbjct: 265 AVVVGGVAVFGGSGSVWGAALGALLLTTIGSALAVLEINQFWQQAIVGGLILLA 318


>gi|317125047|ref|YP_004099159.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Intrasporangium calvum DSM 43043]
 gi|315589135|gb|ADU48432.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Intrasporangium calvum DSM 43043]
          Length = 294

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 75/236 (31%), Gaps = 6/236 (2%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
              +Y + A GLSI+ G +G+L+         G+Y+  +       S  +   +   +  
Sbjct: 14  LGALYFLAASGLSIIYGLMGVLNFAHGAFMMAGSYAGWLTMGALPGSWSVATRLLVAVVV 73

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
           A  +   +  L        +    + ++   + +    +   +       R       + 
Sbjct: 74  ALAVGAVIGLLVEVVLIRPLYRHHIQQVLVTVGLALASVAAAQGIWGADPRTVEKPEWMG 133

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
                              +  +L    +   ++  L  T +    R   +N+    +L 
Sbjct: 134 GTT-----LVLGARLPNDRFLFILVAVAVFLGLLALLHYTRLGLIIRAGVENRTMVEALG 188

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             +       FA+  A   +AG  ++     +SP        I    +V++GGM S
Sbjct: 189 INVHRTFTVVFALGGAAAALAGLLYSQYAGTVSPAQGGSLL-IYAFIVVVIGGMGS 243


>gi|307728881|ref|YP_003906105.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|307583416|gb|ADN56814.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
          Length = 337

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/288 (10%), Positives = 84/288 (29%), Gaps = 12/288 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               +   ++  L      +   + ++  +     + A G++ V+   G + L+     A
Sbjct: 27  FAGLIALCIVGTLLNPDFATLDNMMNVLTRTSFIGIIAVGMTFVI-ISGGIDLSVGSMAA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +              ++   +               + +L   G +     L++++    
Sbjct: 86  L----IAGSMIWLMNALAAGVGGHTFAPLTIVTFGIVFALVLGGLFGCAHGLLITKGRIE 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             I           +          T   SL   +       ++ + +   +  +     
Sbjct: 142 PFIVTLGTLGIFRAVLTWLADGGALTLDNSLSDLYGPVYYASLFGVPVPIWVFLVTAAGG 201

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           ++IL   RTA     + I  N++        +   K+  + +    +G+A   +      
Sbjct: 202 ALILN--RTAFGRHVQAIGSNEQVARYAAIRVDSVKIVTYVLLGICVGVATVLYVPRLGS 259

Query: 256 ISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELC 298
            +P      E   + S+V+      GG   +        +L  +  + 
Sbjct: 260 ATPTTGLLWELEAIASVVVGGTALKGGEGRVIGTVIGAILLSVIANIL 307


>gi|227328014|ref|ZP_03832038.1| xylose transport system permease [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 393

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/345 (12%), Positives = 94/345 (27%), Gaps = 47/345 (13%)

Query: 24  LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI 83
              ++  GA  S + + ++  Q  I  + A G+  V+ S   + L+      +   +  I
Sbjct: 42  FFTYMTDGAYLSARNLSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSMMGLLGGAAAI 100

Query: 84  LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA------------------ 125
               +G  + L I V+  +    G   G      +     +                   
Sbjct: 101 FDVWFGWPLPLTIVVTLALGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFRGILIGITNGT 160

Query: 126 -----------------------TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                                        +   I  +W+  ++        +        
Sbjct: 161 TVSPTSEAMSQIGQSYLPSGIGFMFGAIGLMVFIAWQWRRRSSRARLGLPVNPPAGDIGR 220

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +         +     +   +L +  L    I    RTA       +  N  A   
Sbjct: 221 QTVTVLVVLGAIYLLNDYRGVPTPVLVLTLLMLGGIFLATRTAFGRRIYAVGGNIDAARL 280

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGG 277
               +   K++ FA++   + +AG   ++     SP     +E   + + VI      GG
Sbjct: 281 SGVNVERTKMAVFAINGLMVAVAGLILSSRLGAGSPSAGNIAELDAIAACVIGGTSLAGG 340

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + S++       I+  +      ++   F   +       +    
Sbjct: 341 IGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYVVKGGILLLAVWM 385


>gi|116255604|ref|YP_771437.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115260252|emb|CAK03356.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 295

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 103/304 (33%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I    Y + + GL+I+ G L +++      Y +GA+   +L +  G+  W  + +
Sbjct: 16  LLIGLINGSFYALLSLGLAIIFGLLRVINFAHGAQYMLGAFVAYLLLTYAGIGYWPSLIL 75

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I G  G I+    L+   D   +  L+ +      +        G +G   A     
Sbjct: 76  APVIVGLAGAIIERLFLRRLYDLDPLYGLLFTFGLALAVEGTFRYLYGSSGQPYATPAAL 135

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G               F+   I+  +V++    +     L + +T +    R   +N  
Sbjct: 136 AG----------GANLGFMFLPIYRGWVVVVSLVVCLGTWLLIEKTKLGAYLRAATENAV 185

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   +       +A+ +     AG   A         +   +  I+V ++V++GGM
Sbjct: 186 LVQVFGVNVPVLLTLTYALGAGLAAFAGVLAAPIYQV--SPLMGSNMIIVVFAVVVVGGM 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        +L     L                  +      ++ + + +V+L+R   
Sbjct: 244 GSIMGAIITGYVLGIAEGLTKVF--------------YPEASNIVIFVIMAIVLLIRPAG 289

Query: 339 LLRL 342
           L   
Sbjct: 290 LFGR 293


>gi|309798597|ref|ZP_07692872.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus infantis SK1302]
 gi|308117833|gb|EFO55234.1| branched-chain amino acid ABC transporter, permease protein
           [Streptococcus infantis SK1302]
          Length = 224

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 59/179 (32%), Gaps = 14/179 (7%)

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               I+  R+    +        +L     L   + L +++T +  A R +  +  A   
Sbjct: 53  FPQAIQTVRYDLGPISLTNIQLLILTVSLVLMVLLQLIVQKTKMGKAMRAVSVDSDAAQL 112

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +       FA+ SA  G AG   A   + + P M   +  I      +LGG+  + 
Sbjct: 113 MGINVNRTISFTFALGSALAGAAGVLIALYYNSLEPLM-GMTPGIKSFVAAVLGGIGIIP 171

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             A    ++  +                      +     ++   L L++++R   +L 
Sbjct: 172 GAALGGFVIGLLETFATAFG-------------MSDFRDAIVYGILLLILIVRPAGILG 217


>gi|295095444|emb|CBK84534.1| Predicted ABC-type sugar transport system, permease component
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 331

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 94/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +         ++  + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 30  ILPILILIVAVFGFIAPNFFTESNLLNITRQASINIVLAAGMTFII-LTGGIDLSVGSIL 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A     +         +L   +A++ G    +     + F G    I TL      +
Sbjct: 89  GTTA--VAAMVVSLIPEFAMLSIPAALMLGMVLGLFNGALVAFAGLPPFIVTLGTYTALR 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                          +     F      Y   + ++++    + 
Sbjct: 147 GAAYLLAD-------------------GTTVINSNINFEWIGNNYLGPIPWLVVIALAVI 187

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 188 VVCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGVMSASRLY 247

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 248 SANGNLGTGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 307

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 308 VIKGAVIIIAVLI 320


>gi|302537882|ref|ZP_07290224.1| conserved hypothetical protein [Streptomyces sp. C]
 gi|302446777|gb|EFL18593.1| conserved hypothetical protein [Streptomyces sp. C]
          Length = 376

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 41/298 (13%), Positives = 88/298 (29%), Gaps = 10/298 (3%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS-----I 92
           ++ S  +   +Y + A GL +   + GL +        + A ++  L S  G       +
Sbjct: 7   FVLSGLVSGALYALLATGLVLSYSASGLFNFAHGATAYLCALTFYELHSGLGWPAAPAAL 66

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            ++  ++  +      +M     +       +AT+ +        +    +         
Sbjct: 67  LVVCVLAPGLGWGLDRLMFRRLARVGETAQIVATIGLLVALPAAGLWAVDVLTEAGLPLK 126

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                F    V          +  V  +       +    ++A++ + LR T +    R 
Sbjct: 127 PAENQFGLPGVGPSPARSWQLADGVGVDSDQLITWVVTAVVAAALWVLLRHTRLGLRLRA 186

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
             DN+        +       A+ ++SA  G+AG          + D   F    +  + 
Sbjct: 187 AVDNRSLTELRGISADRLSSVAWMIASALAGLAGVLATPLLGLSAHDFTLFL--FVSATA 244

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
            ++G   S+         L  V  L  G   +             +    L    L L
Sbjct: 245 AVIGRFASVPLAFAGGLGLGVVQNLVAGYASFAEGIT---GFRTAVPFLILFGGLLVL 299


>gi|110678079|ref|YP_681086.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
 gi|109454195|gb|ABG30400.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter denitrificans OCh 114]
          Length = 329

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/331 (11%), Positives = 100/331 (30%), Gaps = 32/331 (9%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---------- 82
             + +   +  +  ++Y + A G  ++  + G+ +    +     A +            
Sbjct: 6   LWTAEVFLNGLMAGVLYALVALGFVLIYKASGIFNFAQGVMALFAAMTLYGIMNGQVPFA 65

Query: 83  ----------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
                     I    + +     I ++  +      ++     +F      I   + +  
Sbjct: 66  HLINAIFGTEIHYFGWNVPALAAIFLTMCVMVLFSWLVQRYIFRFLVGQEPIILFMATIG 125

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
               L     +  G     +   L          + F  F   F I  + +   ++    
Sbjct: 126 LAYFLEGVGDLMWGSDIKTLEVGLPQGINETIDAVTFEAFGYGFFIDNLDIVASVVAAIL 185

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               ++L+ + T    A R + D+ +A  S+  ++ F  +  ++++     +AG  + A 
Sbjct: 186 -VLGLVLFAQYTKQGRAMRAVADDHQAALSVGVSLNFIWILVWSLAGFVALVAGIMWGAK 244

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
                         +  + +++LGG TS+        I+    +L   +    +      
Sbjct: 245 SGVQFSLS---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFLIGQPYLGGATE 301

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
           +            +   + +L R   L   +
Sbjct: 302 NW--------FAYMLALVFLLFRPQGLFGEK 324


>gi|89056497|ref|YP_511948.1| inner-membrane translocator [Jannaschia sp. CCS1]
 gi|88866046|gb|ABD56923.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Jannaschia sp. CCS1]
          Length = 328

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/324 (12%), Positives = 96/324 (29%), Gaps = 33/324 (10%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV----------------- 82
            +  +  ++Y + A G  ++  + G+ +    +     A + V                 
Sbjct: 13  LNGLLNGVMYALVALGFVLIFKASGIFNYAQGVMALFAAMTLVGIQQGRVPFGHLINEIF 72

Query: 83  ---ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              I    + +     I ++ +I  A   ++     K       I   + +      L  
Sbjct: 73  GTDIHYFGWEVPALGAILLTVLIMIAFAYLVQRFVFKHLVGQEPIILFMATIGLAYFLEG 132

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +  G     +   L         +  F  F   F I  + M   ++    +   I  
Sbjct: 133 VSDLMWGSEIRNLDVGLPQGINDWIDVTTFEIFGYGFFIDNLDMAAAVIAAILVMGLIAY 192

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
             + T    A R + D+ +A  S+  ++ +  +  ++++     +AG  + +        
Sbjct: 193 -SQYTKNGRAMRAVADDHQAALSVGISLNYVWVLVWSLAGIVALVAGIMWGSKSGVQFSL 251

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                  +  + +++LGG TS+        I+     L             +   +    
Sbjct: 252 S---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEALFEFAIGPMIGGATENWFA---- 304

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
                 +   L ++ R   L   +
Sbjct: 305 -----YVLALLFLVFRPQGLFGEK 323


>gi|22126495|ref|NP_669918.1| ribose ABC transporter permease [Yersinia pestis KIM 10]
 gi|45441267|ref|NP_992806.1| ribose transport system, permease [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108806845|ref|YP_650761.1| ribose transport system, permease [Yersinia pestis Antiqua]
 gi|108812588|ref|YP_648355.1| ribose transport system, permease protein [Yersinia pestis
           Nepal516]
 gi|145598708|ref|YP_001162784.1| ribose transport system, permease protein [Yersinia pestis
           Pestoides F]
 gi|149366474|ref|ZP_01888508.1| ribose transport system, permease protein [Yersinia pestis
           CA88-4125]
 gi|153950028|ref|YP_001401393.1| ribose ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|162420769|ref|YP_001607444.1| ribose ABC transporter permease [Yersinia pestis Angola]
 gi|165924321|ref|ZP_02220153.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939594|ref|ZP_02228139.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166009377|ref|ZP_02230275.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166211634|ref|ZP_02237669.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167400293|ref|ZP_02305806.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167421773|ref|ZP_02313526.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167424047|ref|ZP_02315800.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167469417|ref|ZP_02334121.1| ribose ABC transporter, permease protein [Yersinia pestis FV-1]
 gi|170024746|ref|YP_001721251.1| monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|218928694|ref|YP_002346569.1| ribose transport system, permease [Yersinia pestis CO92]
 gi|229841535|ref|ZP_04461694.1| ribose transport system, permease protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229843646|ref|ZP_04463789.1| ribose transport system, permease protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902982|ref|ZP_04518098.1| ribose transport system, permease protein [Yersinia pestis
           Nepal516]
 gi|270486767|ref|ZP_06203841.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
 gi|294503527|ref|YP_003567589.1| ribose transport system, permease protein [Yersinia pestis Z176003]
 gi|21959491|gb|AAM86169.1|AE013863_3 putative ABC transporter permease [Yersinia pestis KIM 10]
 gi|45436127|gb|AAS61683.1| ribose transport system, permease protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108776236|gb|ABG18755.1| ribose transport system, permease protein [Yersinia pestis
           Nepal516]
 gi|108778758|gb|ABG12816.1| ribose transport system, permease protein [Yersinia pestis Antiqua]
 gi|115347305|emb|CAL20199.1| ribose transport system, permease protein [Yersinia pestis CO92]
 gi|145210404|gb|ABP39811.1| ribose transport system, permease protein [Yersinia pestis
           Pestoides F]
 gi|149290848|gb|EDM40923.1| ribose transport system, permease protein [Yersinia pestis
           CA88-4125]
 gi|152961523|gb|ABS48984.1| ribose ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|162353584|gb|ABX87532.1| ribose ABC transporter, permease protein [Yersinia pestis Angola]
 gi|165912510|gb|EDR31142.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165923381|gb|EDR40513.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165991932|gb|EDR44233.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166207405|gb|EDR51885.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166960258|gb|EDR56279.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167050242|gb|EDR61650.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167056896|gb|EDR66659.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169751280|gb|ACA68798.1| Monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|229679892|gb|EEO75992.1| ribose transport system, permease protein [Yersinia pestis
           Nepal516]
 gi|229689254|gb|EEO81317.1| ribose transport system, permease protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229697901|gb|EEO87948.1| ribose transport system, permease protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|262361570|gb|ACY58291.1| ribose transport system, permease protein [Yersinia pestis D106004]
 gi|262365690|gb|ACY62247.1| ribose transport system, permease protein [Yersinia pestis D182038]
 gi|270335271|gb|EFA46048.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
 gi|294353986|gb|ADE64327.1| ribose transport system, permease protein [Yersinia pestis Z176003]
 gi|320015579|gb|ADV99150.1| ribose transport system, permease protein [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 331

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 44/321 (13%), Positives = 90/321 (28%), Gaps = 20/321 (6%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y   + L  V    L  L          I ++   I I  + A G+SI +   G   L+ 
Sbjct: 22  YKWGMLLTVVALIALFGLASDNFLDPNNIINILRSIAIVTVIAIGVSISLSIGG-FDLSV 80

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               ++     V L   YG      I ++ +I    G+      +  +   +        
Sbjct: 81  GSTASLANAVVVSLFVWYGFGTTGAIILTLLICTLVGLFNAFLIVVLKIPDMLAT----- 135

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                  +    +  G A  Y           + S                 +  ++L M
Sbjct: 136 -------LASLFVIQGVAMTYSRGGSITQSMLLPSGDMAEGVIPEIFSALGQVPVIVLIM 188

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++  + L+L  T        I  N +A        +  ++ A+ +S+    + G   A
Sbjct: 189 LAVTVVVQLYLSLTKHGRRMYAIGGNPQAARLAGIRTVRYRVLAYVLSAQLAALGGILLA 248

Query: 251 ASRDRISPDMFKFSENIIVISIVILG------GMTSLSKIAKATAILIGVVELCCGMNFY 304
           +     S         +  ++   +G      G  +         IL  +      ++  
Sbjct: 249 SRIGS-SQVNAGSGYLMDAVAAAYIGFSLAGSGKPNAFGTLIGAIILGVLQNGLVMLSVP 307

Query: 305 YFNSLLKFDCSFNMRHTTLMV 325
           Y+   +       M      +
Sbjct: 308 YYAMDIIKGLVLAMALALTYI 328


>gi|264680458|ref|YP_003280368.1| High-affinity branched-chain amino acidtransporter permease livH
           [Comamonas testosteroni CNB-2]
 gi|262210974|gb|ACY35072.1| High-affinity branched-chain amino acidtransport system permease
           protein livH [Comamonas testosteroni CNB-2]
          Length = 309

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 16/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   +Y + A G  ++  + G+ +          A +           + L   +   +
Sbjct: 12  LMVGTLYALIAIGFVLIFKASGVFNFAQGAMVLFSALAMARFSQWIPGWLGLEPGLVGNL 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT----NGKAGIYVADRLYF 158
                 +  +  + +  + LA+  L+  E    ++            G            
Sbjct: 72  LAIVVTLALMVGVAWVIERLALRHLVNQEPITLLMATLGIAYLLDGLGPMVFGSEVYKID 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G     +          V+  +   Y       L   + ++ ++T    A R + D+ +
Sbjct: 132 VGMPKDPVFIMDSLFQGGVMISLEDLYAACIAAILVICLSIFFQKTKTGRALRAVADDHQ 191

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +    +  ++V+     + G  + +               +  + +VILGG+
Sbjct: 192 AAQSIGIPLSRIWVIVWSVAGGVALVVGIIWGSKLGVQYSLS---LVALKALPVVILGGL 248

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TSL        I+    +L            ++   ++ +             +L+R   
Sbjct: 249 TSLPGAIIGGLIIGVGEKLSEVYIGPMVGGGIETWFAYGLA---------LCFLLVRPQG 299

Query: 339 LLRLR 343
           L   +
Sbjct: 300 LFGDK 304


>gi|46198388|ref|YP_004055.1| branched-chain amino acid transport system permease protein livH
           [Thermus thermophilus HB27]
 gi|46196010|gb|AAS80428.1| branched-chain amino acid transport system permease protein livH
           [Thermus thermophilus HB27]
          Length = 297

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 94/306 (30%), Gaps = 20/306 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +  L+Y + A G  ++  +  +++       AIGA+         G    L   +
Sbjct: 8   LFSGVVLGLVYALAALGFVLIYKASRVVNFAQGQFIAIGAFLAYWAMVALGAPFLLAAAL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  ++   G  +    LK       I+ ++ +    ++L           G+        
Sbjct: 68  ALALTALLGFGVERVFLKRMVGQPIISVIMATIGLASLL----------DGLIHLTPFGA 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +  + +                   L       A    + +R+ +  A R++ D+Q 
Sbjct: 118 GNFSYPAFLPSGGVALLGAQVSYPQLLALGFTLAFLALFTWFFQRSTLGIAMRSVADDQM 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL  ++      A+A +      AG             +        V  +VILGG+
Sbjct: 178 AAMSLGVSVEKVFALAWAAAGLTAAAAGIVVGTIAGLNLDGLVHIGLR--VFPVVILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A  ++  +  L  G    +                    + L LV+  + H 
Sbjct: 236 DSIPGAVVAGILIGVLENLAAGYLDPFVPG--------GGTRDVFPFLVLLLVLWFKPHG 287

Query: 339 LLRLRT 344
           L     
Sbjct: 288 LFGTEE 293


>gi|300783516|ref|YP_003763807.1| sugar ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299793030|gb|ADJ43405.1| permease component of ABC-type sugar transport system
           [Amycolatopsis mediterranei U32]
          Length = 349

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/320 (10%), Positives = 91/320 (28%), Gaps = 25/320 (7%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I  +L  +  +   +   +  +     ++ I+  + ++ + G++ V+ + G + L+   
Sbjct: 34  WIGLVLLALVIMFSVIAPDSFPTLFTFQTLFIESSVLLILSVGMTFVIITSG-IDLSVGS 92

Query: 73  AYAIGAY-----SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
              +           + G     + W +I V  +++   G I G+ +          A +
Sbjct: 93  VLILAGMVAGKVMEALSGGDASKAGWGVILVGLVVAVVTGTIWGVINGVLVAVAKIPALI 152

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           +        L     +  G     V   L        S           V+  +   ++L
Sbjct: 153 VTLGTMGAALATAYLLNGGSDLRTVPAELTKTLGYGTSFGVVPNLVIVAVVITVIGAWLL 212

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                         R T        +  N +        +    L  + ++    G+AG 
Sbjct: 213 --------------RTTKFGRYTFAVGSNAEGARRAGIGVTAHLLKVYTLTGFLAGIAGF 258

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
              A  +  +           + ++V+      GG+ ++        I   + +    ++
Sbjct: 259 LSLAYYNSTTISGHTTDNLNAIAAVVMGGTSLFGGVGTILGTVIGVFIPAVLRKGFNIIH 318

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F  +             
Sbjct: 319 VQDFWQMFIVSWVLVAAVWF 338


>gi|221064927|ref|ZP_03541032.1| inner-membrane translocator [Comamonas testosteroni KF-1]
 gi|220709950|gb|EED65318.1| inner-membrane translocator [Comamonas testosteroni KF-1]
          Length = 309

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 16/305 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   +Y + A G  ++  + G+ +          A +           + +   V   +
Sbjct: 12  LMVGTLYALIAIGFVLIFKASGVFNFAQGAMVLFSALAMARFSQWIPGWLGMEPGVVGNL 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT----NGKAGIYVADRLYF 158
                 +  +  + +  + LA+  L+  E    ++            G            
Sbjct: 72  LAIVVTLTLMVGVAWVIERLALRHLVNQEPITLLMATLGIAYLLDGLGPMVFGSEVYKID 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +G     +          V+  +   Y       L   + ++ ++T    A R + D+ +
Sbjct: 132 VGMPKDPVFIMDSLFQGGVMISLEDLYAACIAAILVICLSIFFQKTKTGRALRAVADDHQ 191

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +    +  ++V+     + G  + +               +  + +VILGG+
Sbjct: 192 AAQSIGIPLSRIWVIVWSVAGGVALVVGIIWGSKLGVQYSLS---LVALKALPVVILGGL 248

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TSL        I+    +L            ++   ++ +             +L+R   
Sbjct: 249 TSLPGAIIGGLIIGVGEKLSEVYIGPMVGGGIETWFAYGLA---------LCFLLVRPQG 299

Query: 339 LLRLR 343
           L   +
Sbjct: 300 LFGDK 304


>gi|209518080|ref|ZP_03266910.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209501486|gb|EEA01512.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 293

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 90/304 (29%), Gaps = 24/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   +Y + A G  ++  + G+ +         GA +  +     G++ WL I +
Sbjct: 8   LVGGLLAGTMYSVVAIGFVLIYKASGIFNFAQGALVLFGALT-YVCVVERGVAPWLAILI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +        ++ G   L+   +   I   + +     IL     +  G            
Sbjct: 67  TLAALVVIAVLTGRLVLRPLVNRPPITLFMATLGLSLILEGAAQLFWGAQ---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         V+   F  +       L   +    R + +    R + D+  
Sbjct: 117 -VHGLDLGIDDKPLHLGGVMISQFDLFAAAVAGALVIGLSALTRYSRLGLKLRAVADDPL 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +       +A++     +AG  + A               +  + ++I+GG 
Sbjct: 176 AALAVGVRLPQVWAIVWALAGFVSLVAGLLWGARLGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S++       ++    +L            ++              +   L +L R   
Sbjct: 233 SSITGAIVGGLLVGASEKLAEVYLGAVIGDGIENWFP---------YVIAMLFLLARPAG 283

Query: 339 LLRL 342
           L   
Sbjct: 284 LFGE 287


>gi|330976208|gb|EGH76270.1| inner-membrane translocator [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 334

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 47/319 (14%), Positives = 96/319 (30%), Gaps = 26/319 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + L+ +   L+  LF    + Q ++ +      M +Q+ I  + A G++ V+ + G + L
Sbjct: 27  IFLVLIGIGLIFELFGWIVRDQSFLLNSQRLVLMILQVSIIGLLAIGVTQVIITTG-IDL 85

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+ A     L              S         +  LP        L +  L 
Sbjct: 86  SSGSVLALSAMIAASLAQ-----------TSDFSRAVFPSLTDLPVWIPVVVGLGVGLLA 134

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
            +     I I   P      G+ V+ R      T    +       + +        + L
Sbjct: 135 GAINGSIIAITGIPPFIATLGMMVSARGLARFYTEGQPVSMLSDSYTAIGQGAMPVIIFL 194

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +        + LR T        I  N +A  +    +    +  ++++    G+AG  
Sbjct: 195 VVA---VIFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLVIVYSIAGLLAGLAGVV 251

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            +A        M    E   + + VI      GG+  ++       IL  +      +  
Sbjct: 252 ASARAATGQAGMGMSYELDAIAAAVIGGTSLSGGVGRITGTVIGALILGVMASGFTFVGV 311

Query: 304 YYFNSLLKFDCSFNMRHTT 322
             +   +       +    
Sbjct: 312 DAYVQDIIKGLIIVVAVVI 330


>gi|327194479|gb|EGE61339.1| ABC transporter membrane spanning protein (ribose) [Rhizobium etli
           CNPAF512]
          Length = 324

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 97/312 (31%), Gaps = 27/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V   ++  L      SQ+ + ++  Q  I    A G+++V+   G + L+     A
Sbjct: 27  LIGLVAIVVIFGLLAPDFLSQRNLLNILQQSSINACLALGMTLVI-ISGGIDLSVGPTAA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           I A     L          ++    +      +   L +                     
Sbjct: 86  ISAVICATLLVAGVPVPLAILAGLGIGVLCGLVNGVLVA-------------------YA 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L  +       +       +Y  G  V  + + FR   +  +  I    V++ +  L A
Sbjct: 127 GLQPFIVTLGTLSTYRAIALIYTGGNPVLGVPQSFRTLFNGTVAGIPNSVVMVAVVALLA 186

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++L  ++T +      +  N++A +     I   K++A+ +S A   +A          
Sbjct: 187 WVLL--KKTPLGEYLLAVGGNEEAAYVAGVPIAVTKITAYVISGALAALASMILIGRLGA 244

Query: 256 ISPDMFKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P +    E        +    ++GG  S+        IL  +      MN   F  LL
Sbjct: 245 AEPILGNLWELDAIAAAAIGGASLMGGKGSVIGTLLGAIILGAMRNGLTLMNVQAFYQLL 304

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 305 ATGLIILVAMMI 316


>gi|291279056|ref|YP_003495891.1| branched-chain amino acid ABC transporter permease [Deferribacter
           desulfuricans SSM1]
 gi|290753758|dbj|BAI80135.1| branched-chain amino acid ABC transporter, permease [Deferribacter
           desulfuricans SSM1]
          Length = 300

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/289 (11%), Positives = 85/289 (29%), Gaps = 4/289 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G ++V G + L++       A+ AY  +++  +   +      V
Sbjct: 8   LINGLTIGSIYALVALGYTMVYGVMKLINFAHGDLVALSAYIGLVIMMQLTGASIPNYIV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +     +++ +  +                      +    +      +    R   
Sbjct: 68  IPAVFIITAIVIAIIGVILERIAYRPLRHAPRLSAVVSALGAGMVIQNGIMLIWGPRP-- 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  ++    +    V   +    +L+    L   + +++ +T I  A R    +Q 
Sbjct: 126 -KIYPSDVVPAVYWNIGGVSIGLMQLIILVLSLILMVVLYIFVNKTKIGTAIRASAIDQL 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    +  F + S+   + G F       I  +M  +   +      I+GG+
Sbjct: 185 AAKLMGIDVNKIIVMIFVIGSSLGSVGGLFIGMYYKGIYFNM-GWIYGLNAFVAAIIGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            ++        +L        G     +     +     +       I 
Sbjct: 244 GNIPGAMLGGMLLGLFNAFIAGYVSTTWADAFTYILLIIILIFRPTGIL 292


>gi|225569344|ref|ZP_03778369.1| hypothetical protein CLOHYLEM_05426 [Clostridium hylemonae DSM
           15053]
 gi|225162143|gb|EEG74762.1| hypothetical protein CLOHYLEM_05426 [Clostridium hylemonae DSM
           15053]
          Length = 313

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/323 (11%), Positives = 104/323 (32%), Gaps = 26/323 (8%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            ++ ++   I  L A+V    + ++     S  +I  +  +  I  + A G + V+   G
Sbjct: 4   KVQRHQTLIISYLTALVLFAAISVYKPGFASIDHIRVLCSEAAIIGVVAIGQTFVI-ITG 62

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+      I A     +      S+   +P   +++   G++ G+         + +
Sbjct: 63  GIDLSVAWMVGIAAIMITNVTKGLDESLAWAVPFILVLTTCFGLVNGICIAYLNMPPIVM 122

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
              + + +   ++   +    G A  ++                            + + 
Sbjct: 123 TLGMNTVLQGGLVAVTQGAPGGAAPAFIKKM--------------------GQSSFLGIP 162

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y+++    L+A + + L +         + +N          +    L+A+AVS    G+
Sbjct: 163 YLIIIWAVLAAVVTVLLFKMKYGRELFAVGNNATVAAYSGINVRRVTLTAYAVSGLTAGI 222

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
           AG   A    +    +    +   + ++ I     +GG  +          +  ++ +  
Sbjct: 223 AGMLLAGKVGQSYLGIGDNFQFQSIAAVAIGGTSLMGGNGNYLGTVAGAFTITIILGILA 282

Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322
            +N  +    + +          
Sbjct: 283 ALNLPFGVQKMAYGIVVLASVLM 305


>gi|160937611|ref|ZP_02084972.1| hypothetical protein CLOBOL_02502 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439680|gb|EDP17430.1| hypothetical protein CLOBOL_02502 [Clostridium bolteae ATCC
           BAA-613]
          Length = 335

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/325 (11%), Positives = 106/325 (32%), Gaps = 25/325 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +  +L V+  L+     G   S   ++ +  +  I +M + G+ +V+   G + L+
Sbjct: 19  RELTLFAILIVIAVLVQVRTGGRFLSSSNLNDLLRETAILMMVSVGMMMVI-LTGCIDLS 77

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +      +    +  +  ++I + A+  G    ++    +     +  I TL +
Sbjct: 78  LGSTMGLAGMICALTLRDHRETPIIVIVLIALGIGLLAGLLNGFIVAKLRIFPLIGTLGV 137

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
            ++ + ++  +        G                   F    +  V     + ++ + 
Sbjct: 138 CDMLRGLVYVFSKGAWVGQGDM--------------TQEFMSISTGKVFGINNLVFIAIL 183

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  +    + + R          + +N+ +        +  K  A+ ++    G+AG  +
Sbjct: 184 ITVMGYIFLQYFRN---GRYMYAVGNNELSAKISGINPVRTKFLAYVINGMIAGLAGMLW 240

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                    +    S  + VI+ V+LGG+                  +   + F   N++
Sbjct: 241 ICKFGNAQGESCS-SYELNVIASVVLGGV------FITGGSGKVGGVVLGVLLFGTLNNI 293

Query: 310 LKFDCSFNMRHTTLMVIALFLVILM 334
           L      +     +    +   +++
Sbjct: 294 LPLIQVSSFWQMGIKGFVIIASVVI 318


>gi|157372927|ref|YP_001480916.1| monosaccharide-transporting ATPase [Serratia proteamaculans 568]
 gi|157324691|gb|ABV43788.1| Monosaccharide-transporting ATPase [Serratia proteamaculans 568]
          Length = 329

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 93/302 (30%), Gaps = 18/302 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +++  L LL ++  + L +      +   +  +     I  + A GL  VV   G + ++
Sbjct: 12  RHEFYLGLLVLLLAIGLSVSTSEFLTLGNLTDVATSYAILGILACGL-FVVLIAGGIDIS 70

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                AI  Y       ++G    L   ++  +    G++ G      +          +
Sbjct: 71  FPAITAIAQYVMASWVIQHGGGFPLAFALAIGVGLLLGLVNGFLVYWLKVP-------AI 123

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 + + +  +     G ++     +    +            + +    +  + + 
Sbjct: 124 IITIATLNLFYGLLVYATNGTWLYGFPDWFMDGISWFSFQGADGYDYGLTLPLLCLLAVI 183

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +          +  T +      +  N+ A   L   ++      +       G+A    
Sbjct: 184 IVTGVL-----MNFTRLGRQIFAMGGNRDAASRLGLNLLRLHFYVYGYMGILAGIAAVVQ 238

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A     ++P+     E  ++ ++V     + GG  SL+       +L  +      ++  
Sbjct: 239 AQITQSVAPNSLLGFELTVLAAVVLGGTSMTGGRGSLTGTLLGVVLLAFLQNGLTLLSVS 298

Query: 305 YF 306
            +
Sbjct: 299 AY 300


>gi|187925207|ref|YP_001896849.1| sugar ABC transporter ATPase [Burkholderia phytofirmans PsJN]
 gi|187716401|gb|ACD17625.1| Monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
          Length = 335

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 83/279 (29%), Gaps = 29/279 (10%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V  +++     +  S   I+++  Q+ I  + A G++ V+   G + L+     A
Sbjct: 40  FIGLLVVCIVMVFASDSFLSGANIENVLRQVSINAIIAVGMTCVI-LTGGIDLSVGSVMA 98

Query: 76  I-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           + G  +  ++ +       L I ++  +         +         + +AT+ ++    
Sbjct: 99  LAGTLAAGLMVAGMNAVAALAIGIAVGLGFGAANGFFVAFAGMPPIIVTLATMGIARGLA 158

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I     PI                                     + +   ++ M  + 
Sbjct: 159 LIYTGGYPIDGLPD----------------------WVSFFGSGKILGVQAPVVIMAVIY 196

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L R         I  N++A       +   KL  + ++      A     A   
Sbjct: 197 VIAWVLLERMPFGRYVYAIGGNEQATRLSGVRVARVKLIVYTIAGLTSAFAAIVLTARLM 256

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKAT 288
              P+     E   + ++V     I GG  S+       
Sbjct: 257 SGQPNAGVGFELDAIAAVVMGGTSISGGRGSIIGTLIGA 295


>gi|108799985|ref|YP_640182.1| inner-membrane translocator [Mycobacterium sp. MCS]
 gi|119869097|ref|YP_939049.1| inner-membrane translocator [Mycobacterium sp. KMS]
 gi|108770404|gb|ABG09126.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Mycobacterium sp. MCS]
 gi|119695186|gb|ABL92259.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Mycobacterium sp. KMS]
          Length = 345

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 81/305 (26%), Gaps = 17/305 (5%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL--------------- 84
                   IY + A G ++V G L L++      + +G +                    
Sbjct: 32  IDGLSWGAIYALVAVGYTLVFGVLRLINFAHSEIFMLGMFGAYFCLDFILGFTPSGNAYN 91

Query: 85  --GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
              +   L + + +  + ++SG+  + +   + +      A     +        +  + 
Sbjct: 92  KGIALTVLYLVIAMLFAMLVSGSAAVGLEAVAYRPLRRRGARPLTFLITAIGMSFVLQEF 151

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +      I            +  +    +F             ++      +    + + 
Sbjct: 152 VHFILPKIIKGYGGSNAQQPITLVQPKTQFEIFGASVSNITLVIIGAALLFALLTDIAIN 211

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           RT      R +  +      +  +     +  F +     G A   +     +       
Sbjct: 212 RTKFGRGIRAVAQDPNTATLMGVSRERVIMLTFMIGGLLAGAAALLYTLKVPQGIIYSGG 271

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F   I   S  +LGG+ +L        IL  +      +    +  ++ F     +    
Sbjct: 272 FLLGIKAFSAAVLGGIGNLRGALLGGLILGVMENYGQAVFGTQWRDVVAFVLLVLVLLFR 331

Query: 323 LMVIA 327
              I 
Sbjct: 332 PTGIL 336


>gi|148260846|ref|YP_001234973.1| monosaccharide-transporting ATPase [Acidiphilium cryptum JF-5]
 gi|326404240|ref|YP_004284322.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|146402527|gb|ABQ31054.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Acidiphilium cryptum JF-5]
 gi|325051102|dbj|BAJ81440.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 330

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/321 (10%), Positives = 83/321 (25%), Gaps = 26/321 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +      +  VV  +   +      S      +  Q+ +  + A G + ++ + G +
Sbjct: 23  RFVRQIAFALISIVVLVVAFGVLNPRFLSGGNWFHIAQQVAVIAILATGQTFIIATAG-I 81

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            ++     A+ +    I      +S  + I ++  +    G I+GL  +           
Sbjct: 82  DISQGSVVALSSMICAIAIVDAHMSSGVAIVLTLALGAVIGAIIGLSVVVLGVPPFIATL 141

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
            +++      L+                                 F        +    +
Sbjct: 142 GMLAVALGAALLT--------------------TNGTPVFGLPNGFQEISQGTVLGFPNM 181

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
                 L+      L +T        I  N +A   +   +    L  +        +AG
Sbjct: 182 AWIAVLLALFSAYLLNKTRFGRYTLAIGSNAEAARRVGINVPRHLLLVYVFGGIVSSLAG 241

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
             + A      P      E   + ++VI      GG+ ++        ++  +       
Sbjct: 242 VIYLAYTAAAQPTSGANYELYAIAAVVIGGGSLFGGVGTILGSILGALLMTILKNGTQLA 301

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
               +   +            
Sbjct: 302 GISPYVEQVILGIVVVGAVYV 322


>gi|332288646|ref|YP_004419498.1| ribose ABC transporter permease protein [Gallibacterium anatis
           UMN179]
 gi|330431542|gb|AEC16601.1| ribose ABC transporter permease protein [Gallibacterium anatis
           UMN179]
          Length = 375

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 48/357 (13%), Positives = 99/357 (27%), Gaps = 47/357 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L  + V+     F   GA  S + I ++  Q  I  + A G+  V+     + L+  
Sbjct: 12  YIMLIAIIVIMLFFSFATDGAYLSARNISNLLRQTSITGILAIGMLFVI-IAAEIDLSVG 70

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               +      I    +G  +   I  + ++    G+  G      R     +    +  
Sbjct: 71  SLMGLLGGFAAITNVWWGWPLPATILATLILGLIFGVWNGYWVAYQRVPSFIVTLAGLLA 130

Query: 132 I-----------------------------------------FQNILIKWKPITNGKAGI 150
                                                        IL   +     +   
Sbjct: 131 FRGILVGMTNGSTVSPTSQSMNLIGQAYIPDIFGLTIGGLAVLAFILWSSRQRHARQKRQ 190

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                L     T  +L          +     + + +L +  L+       ++TA     
Sbjct: 191 LPVPALSKDVLTYAALAVLLLGSIYLLNDYRGIPFPVLLLAILAVIGYFISKKTAFGRYI 250

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N  A       +   KL+ FA++   + +AG   +A     SP   + +E   + 
Sbjct: 251 YAIGGNIDAARLSGIKVEKIKLAIFAINGLMVAIAGLILSARLGAGSPSAGQNAELDAIA 310

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + VI      GG+ S+  +     I+  +      ++   F   +       +    
Sbjct: 311 ACVIGGASLAGGVGSIFGVIIGALIIAALDNGMSMLDVPTFWQYIVKGGILLLAVWV 367


>gi|159900851|ref|YP_001547098.1| inner-membrane translocator [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893890|gb|ABX06970.1| inner-membrane translocator [Herpetosiphon aurantiacus ATCC 23779]
          Length = 411

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/366 (9%), Positives = 92/366 (25%), Gaps = 59/366 (16%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  L+         +   + ++ +QI      + G+ +++  LG + L+     
Sbjct: 34  VIIGLIIIALVFQSINKNFLTPLNLTNLMVQIAAMGTISTGVVLIL-LLGEVDLSAGQVS 92

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A    +L SR+ L   + I  + ++    G++ G     FR     +    +     
Sbjct: 93  GLAAAVMAVLVSRHNLPAAVAIIGAIVVGALVGLLQGWWISTFRVPSFVVTLAGLLAWQG 152

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY--------- 185
           + L       +        + +      +                 +F  Y         
Sbjct: 153 SRLRVLGDTGSINITNKFINDIANYKLPIWLGWVLGIVSVVVYTLIVFNEYRSRRAAELP 212

Query: 186 -------------------------------------------VLLGMCFLSASIILWLR 202
                                                       ++             +
Sbjct: 213 TGSLNGVFWRVGVVGASVLAGVAMMSVNRNANAAGNPIQGVPSAVIIFLTFLIIFDFITQ 272

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           RT        +  N +A       +   +++ F ++SA     G   A+  +  +     
Sbjct: 273 RTRFGRYVYAVGGNTEAARRAGINVNRIRITIFMLASALAACGGILAASRLNAANQSSGD 332

Query: 263 FSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
               +  I+  ++      GG   +        ++  +      +        +      
Sbjct: 333 GDVLLNAIAAAVIGGTSLFGGRGRIWSALLGALVIGAIANGMDLLALKSSIKFIVTGSVL 392

Query: 317 NMRHTT 322
            +  T 
Sbjct: 393 LLAVTI 398


>gi|110668656|ref|YP_658467.1| ABC-type branched-chain amino acid transport system, permease
           protein I [Haloquadratum walsbyi DSM 16790]
 gi|109626403|emb|CAJ52863.1| ABC-type branched-chain amino acid transport system, permease
           protein I [Haloquadratum walsbyi DSM 16790]
          Length = 294

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 73/289 (25%), Gaps = 10/289 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    I+  +  + A GL++  G    ++         GAY  + L          L   
Sbjct: 12  LIYGLIEGSVISVGAVGLTLSYGVTRFINFAYGEFLTYGAYITLFLSGTGIGISLSLPVS 71

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
                   G+   + S  F         + +      +    +       G+        
Sbjct: 72  VVGAVLLVGVFGVIISRVFFEPLSTRGPIPLLITSIGVAFILRYSLTAAVGVSARQLPVP 131

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   V             V        V +        I + L+ T +    R    N+ 
Sbjct: 132 LMRPV---------EFFGVGTTPIRATVFVVAIATMLLIHILLKYTMLGKTMRATSGNRN 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                           + +S+    +AG  +A            F   I++ +  +LGG+
Sbjct: 183 LAEIAGIDTKGVIRRTWFISAGAGALAGVLYAILFAPF-RPTIGFEYLIVIFAATLLGGI 241

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
                      ++  V+ L        +     F     +       IA
Sbjct: 242 GRPYGAMLGAIVVGIVMSLGTTYLSAEYTMAYAFAILVGVLLLNPTGIA 290


>gi|51595902|ref|YP_070093.1| ABC sugar transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|186894990|ref|YP_001872102.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
 gi|51589184|emb|CAH20804.1| ABC sugar transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|186698016|gb|ACC88645.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
          Length = 331

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 44/321 (13%), Positives = 90/321 (28%), Gaps = 20/321 (6%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y   + L  V    L  L          I ++   I I  + A G+SI +   G   L+ 
Sbjct: 22  YKWGMLLTVVALIALFGLASDNFLDPNNIINILRSIAIVTVIAIGVSISLSIGG-FDLSV 80

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               ++     V L   YG      I ++ +I    G+      +  +   +        
Sbjct: 81  GSTASLANAVVVSLFVWYGFGTTGAIILTLLICTLVGLFNAFLIVVLKIPDMLAT----- 135

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                  +    +  G A  Y           + S                 +  ++L M
Sbjct: 136 -------LASLFVIQGVAMTYSRGGSITQSMLLPSGDMAEGVIPEIFSALGQVPVIVLIM 188

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++  + L+L  T        I  N +A        +  ++ A+ +S+    + G   A
Sbjct: 189 LAVTVVVQLYLSLTKHGRRMYAIGGNPQAARLAGIRTVRYRVLAYVLSAQLAALGGILLA 248

Query: 251 ASRDRISPDMFKFSENIIVISIVILG------GMTSLSKIAKATAILIGVVELCCGMNFY 304
           +     S         +  ++   +G      G  +         IL  +      ++  
Sbjct: 249 SRIGS-SQVNAGSGYLMDAVAAAYIGFSLAGSGKPNAFGTLIGAIILGVLQNGLVMLSVP 307

Query: 305 YFNSLLKFDCSFNMRHTTLMV 325
           Y+   +       M      +
Sbjct: 308 YYAMDIIKGLVLAMALALTYI 328


>gi|307326703|ref|ZP_07605896.1| inner-membrane translocator [Streptomyces violaceusniger Tu 4113]
 gi|306887687|gb|EFN18680.1| inner-membrane translocator [Streptomyces violaceusniger Tu 4113]
          Length = 323

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 92/297 (30%), Gaps = 27/297 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           ++D  + +L V   L          S+  +      I    + A  ++++V   G + L+
Sbjct: 4   RWDTAVGVLLVAVFLTGLGTTDGFASRDNLAFAFNDIAEVALMALPMTLLV-VAGQVDLS 62

Query: 70  CVIAYAIG-AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                 +G A +  +  + +     + + +   + G       +  +      + I TL 
Sbjct: 63  VASMLGLGSALTGQLWDAGWAFETIVPVVLLVGVVGGLINGWLVTRVGLPSLAVTIGTLA 122

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +     ++++                       T            +  +   F+ Y ++
Sbjct: 123 LYRGLASVVLG------------------TGAITDFPETYAKWAVDTTTVPGTFLTYPVV 164

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
               L+A   + L  T +  +   I   + A +     +   KL  F VS      AG  
Sbjct: 165 LFIVLAAIAAVVLHATGLGRSLFAIGAQEDAAYFAGIRVKRVKLLLFVVSGLISAFAGVV 224

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCC 299
           F                 ++VI+ V+LGG+       +L        ++  +  L  
Sbjct: 225 FTLRYGSA-RADNGQGFEMLVIASVLLGGVDFDGGKGTLFGAVAGVLLIGVLKNLLT 280


>gi|294815952|ref|ZP_06774595.1| ABC transporter integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|326444291|ref|ZP_08219025.1| putative ABC transporter permease protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294328551|gb|EFG10194.1| ABC transporter integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 347

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 91/318 (28%), Gaps = 25/318 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +L +LAV+  +       A      +  +  Q  I  +   G++ V+ + G + L+
Sbjct: 39  RTLSLLGVLAVLIAVGGITEPDAFLDTGNLQLVLTQASIIGVVTVGMTFVI-TSGGIDLS 97

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+   S            +  I  +A+  G    ++    + + G    IATL M
Sbjct: 98  VGAIVALA--SVWATTVATQEYGFTGILFTAVAVGLGCGLVNGVLIAYGGLVPFIATLAM 155

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
               + + ++                    G T    +           Y + +  ++L 
Sbjct: 156 LASARGLALQITD-----------------GRTQMVTVDSVLELGVKDSYVLGVPPLVLV 198

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              + A   L L RT        +  N +A       I   +L  + +S    G+A    
Sbjct: 199 FAAVVAIGWLLLNRTTFGRRTLAVGGNAEAARLAGIDIRRHRLLLYLLSGLCCGIAAFLL 258

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFY 304
                          E   + + +I      GG  +++       I   +  +    N  
Sbjct: 259 VVLSGSGQNTNGNLYELDAIAAAIIGGTLLSGGRGTVTGSVLGVLIFTTITNIFALNNLE 318

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +            
Sbjct: 319 SAVQQIAKGAIIVAAVLV 336


>gi|284045797|ref|YP_003396137.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283950018|gb|ADB52762.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 348

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 80/271 (29%), Gaps = 27/271 (9%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             +   + ++  Q  I  M A+G+++VV   G   L+     A+       L       +
Sbjct: 46  FFTSINLQNILDQGAILAMVAFGVTLVV-LSGEFDLSVGATVALSGVIGAKLAGSTDSVL 104

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
              +    + +    +   L +         I TL    I + + +              
Sbjct: 105 IGFLACVGVGAIVGLINGVLVAYV--QIPSFIVTLGALTIARGLALAATDGG-------- 154

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                                       + +  ++     +  +I    R+T++      
Sbjct: 155 -----------TVTGLPSGIDVFGDEQLLGLSLLVWLTAAVFLAIWFIQRQTSLGVRIYA 203

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
              N+ A       +   +L+ FA+S    G+AG    +      P   +  E   V +I
Sbjct: 204 TGGNRDAARLAGVPVARVRLAVFAISGITAGVAGMGLLSRVGSGQPSGAQLLELFAVAAI 263

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELC 298
           V+      GG  S+ +      +++ +    
Sbjct: 264 VVGGTSLYGGRGSVVRTLFGVLLIVVLQNGL 294


>gi|238764745|ref|ZP_04625688.1| Permease protein of ribose ABC transporter [Yersinia kristensenii
           ATCC 33638]
 gi|238697036|gb|EEP89810.1| Permease protein of ribose ABC transporter [Yersinia kristensenii
           ATCC 33638]
          Length = 336

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/317 (11%), Positives = 89/317 (28%), Gaps = 16/317 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+   L  L      S   + ++  Q+ IY + A G++ ++     + L+     A
Sbjct: 25  LIFLVLLMALFALLAPRFLSSINLFNIVRQVSIYGIIAVGMTFII-LTRGIDLSVGAIAA 83

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +      ++        ++L      I+     +  + +    G    +    ++     
Sbjct: 84  LSGVVAAVVAKGGIDGQFMLFSDGREIAWQWAALAAIITGGLAGALQGLIIARLAVPAFV 143

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +    +  G   +                          V   +F    ++    L  
Sbjct: 144 VTLGGLTVFRGLTLMISNGSPVSGFDDALGWWGRGMVGPVPVPVIVFAVVAIIASVTLHF 203

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                   T    +   I  N +A       +     S + ++    G+ G    A  + 
Sbjct: 204 --------TRYGRSIYAIGSNPEAARLCGLNVKGVVTSVYVLTGLLAGLGGFLLTARLNS 255

Query: 256 ISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                      + VI+ V++      GG  S+      T ++  ++     +N   +   
Sbjct: 256 AEAVA-GNQYELYVIAAVVIGGTSLYGGTGSIWGTVIGTLLIGVLLNGLVILNISPYIQQ 314

Query: 310 LKFDCSFNMRHTTLMVI 326
           L          T  + I
Sbjct: 315 LLIGVIIVAAVTFDIFI 331


>gi|71909653|ref|YP_287240.1| inner-membrane translocator [Dechloromonas aromatica RCB]
 gi|71849274|gb|AAZ48770.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Dechloromonas aromatica RCB]
          Length = 304

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 91/307 (29%), Gaps = 16/307 (5%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +     L+  + A GL++V G +  ++L     Y +GAY               L    
Sbjct: 10  LNGLQFGLMLFLLAAGLTLVFGIMDCINLAHGSLYMVGAYFVAAAALAADSFWIGLGAGV 69

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           A  +    ++      +          L    +        + I    A +         
Sbjct: 70  AGAAVLGLLLELSLFRQLYKRDHLSQVLATFALILIANEAVRWIWGPAALMLNPPEALSG 129

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                              Y  +   ++     ++  + L + ++ +    R    N++ 
Sbjct: 130 PV-----------EIGGFFYPAYRLVIIAFGLAVAGLLYLLVAKSRVGMWVRAGASNREM 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   +     + F   +A   +AG                 S  I+   ++I+GG+ 
Sbjct: 179 TEALGINVQGLFTAVFVFGAALCALAGGLLGPLLAV--QVGMGESVLILAFVVIIIGGIG 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMRS 336
           S+      + I+  V  L   +      +LL  D +        + L+ + +  ++  + 
Sbjct: 237 SIRGALVGSLIVGTVDTLGRALLPTLLRALLPADAAATLGPALASILIYLLMAGILFFKP 296

Query: 337 HSLLRLR 343
             L   R
Sbjct: 297 QGLFPAR 303


>gi|222106493|ref|YP_002547284.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221737672|gb|ACM38568.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 285

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 77/267 (28%), Gaps = 12/267 (4%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                +  + + GLS+ +G +G ++L   +    G Y      S +GL   L++  + + 
Sbjct: 11  LAYASVLYLISVGLSVTLGLMGFVNLAHGVFAMAGGYIAATAISAWGLPWPLMVICAPLA 70

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 +              +  ++       I+     +  G     V    +     
Sbjct: 71  VALLAAVAEKLLYARLYGRSELDQVLFCIGLIFIVGALARLFFGPLMRPVVIPEFLAQNL 130

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                 F+ +    +   I     +L +            R+ I    R   +N+    S
Sbjct: 131 TVGPFSFYLYKLVVIGIGILTAAFILFVL----------ERSRIGAIIRASVENRGMAES 180

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +        ++ FA   A   + G   A          F     + ++  V   G+ +L 
Sbjct: 181 IGIRTKHVFMATFAFGGALAALGGMLGADVFGLNPSYAFDILVYVQIVVAVA--GLGTLR 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSL 309
               A  ++  V  +       +   +
Sbjct: 239 GSFVAALLVGAVQTVSAYYVPAFGTVM 265


>gi|116669701|ref|YP_830634.1| inner-membrane translocator [Arthrobacter sp. FB24]
 gi|116609810|gb|ABK02534.1| nucleoside ABC transporter membrane protein [Arthrobacter sp. FB24]
          Length = 447

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/319 (12%), Positives = 91/319 (28%), Gaps = 15/319 (4%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS--------LGLLSLNC 70
            V   L +  FL          S+ +  LI       + +V GS         G++++  
Sbjct: 120 IVFIVLFVAAFLIWVVGGARTPSISLAGLIAGSVTLAVPLVFGSLSGVLCERAGVVNIAI 179

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                 GA++  ++ +        L+  +   +    ++            +    L + 
Sbjct: 180 EGQLLGGAFTAAMVATLTKSPFIGLLAAAVAGAVVSMVLAVFSIKYLVNQIIVGVVLNVL 239

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                  +    +   KA      RL  +   V S I              ++ Y+ + +
Sbjct: 240 VSGLTGFLFSTVMQANKAQFNSPGRLPIIDIPVLSSIPVIGPILFKQSVVGYLMYIAVAV 299

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
            ++         +T      R + ++ +A  ++   +   +     +  A  G+ G+FF 
Sbjct: 300 VWVGLF------KTKWGLRVRAVGEHPQAADTMGIKVNATRFWNVTLGGAVAGIGGSFFT 353

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                            I ++ +I  G  +      A  +      L   +         
Sbjct: 354 LVAIDSFTKEISGGRGFIALAALIF-GRWNPIGAFFAALLFGFADNLQSIVTIIGTPVPS 412

Query: 311 KFDCSFNMRHTTLMVIALF 329
           +F        T L V  L 
Sbjct: 413 QFMAMLPYLVTVLAVAGLV 431


>gi|296269443|ref|YP_003652075.1| inner-membrane translocator [Thermobispora bispora DSM 43833]
 gi|296092230|gb|ADG88182.1| inner-membrane translocator [Thermobispora bispora DSM 43833]
          Length = 296

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 85/309 (27%), Gaps = 21/309 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G  ++  +  +++        +G +          L  W  +  
Sbjct: 8   LVNGVSIGAVYALIALGFVVIFKATEVVNFAHASLLLVGGFLIAK--LHPVLGFWAALAA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               +   G ++    L+     +     I++     ++        G            
Sbjct: 66  GIAGAALIGALVEFLILRRARTGVHGVLAIVTIGVDIMITAELTRQIGTD---------- 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +    R        ++        L     L A+ +L  + T+   A R   ++ +
Sbjct: 116 -VLAMGDPWRDRVVHLGPILIAQTRLVALAVAATLIAAFLLAFKFTSWGVALRATAEDAE 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    L A    +  +    A F         D       +      ILGG+
Sbjct: 175 AAALMGIRLGRVSLGA-WAIAGALAAIAALFLCVFPTPGLDRNTAVAAMRAFPAAILGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +       I+     L  G           F  +          + +F+++L R   
Sbjct: 234 DSTTGALAGGLIIGVTESLVNGYQSELAFLGRGFGDAAP-------FLVMFVILLFRPSG 286

Query: 339 LLRLRTPSN 347
           L   +  + 
Sbjct: 287 LFGTKELTR 295


>gi|149200900|ref|ZP_01877875.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. TM1035]
 gi|149145233|gb|EDM33259.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. TM1035]
          Length = 320

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/325 (11%), Positives = 102/325 (31%), Gaps = 33/325 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---------------- 82
           + +  +  ++Y + A G  ++  + G+ +    +     A + V                
Sbjct: 4   VLNGLMAGVLYALVALGFVLIYKASGIFNYAQGVMALFAAMTLVGMMEGRVPFSHLINAI 63

Query: 83  ----ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               I    + L     I ++ ++  A   I+     +   +   I   + +      L 
Sbjct: 64  FGTEIHHFGWHLPGLAAILLTMVVMVALAWIVNQLIFRHLVNQEPIILFMATIGLAYFLE 123

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            +  +  G     +   L      +     F  F   F I  + +    +    +  +++
Sbjct: 124 GFGDMMWGSDIKKLDVGLPQGINLMIDETTFNIFGYGFFIDNLDLVATGVAALLV-IALV 182

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           ++ + +    A R + D+ +A  S+  ++ F  +  ++++     +AG  +         
Sbjct: 183 IFAQYSKQGRAMRAVADDHQAALSVGISLNFIWVMVWSLAGFVALVAGIMWGTKSGVQFS 242

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                   +  + +++LGG TS+        I+    +L             +   +   
Sbjct: 243 LS---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFTVGPLVGGATENWFA--- 296

Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343
                  +   L ++ R   L   +
Sbjct: 297 ------YVLALLFLVFRPQGLFGEK 315


>gi|126435613|ref|YP_001071304.1| inner-membrane translocator [Mycobacterium sp. JLS]
 gi|126235413|gb|ABN98813.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Mycobacterium sp. JLS]
          Length = 345

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 81/305 (26%), Gaps = 17/305 (5%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL--------------- 84
                   IY + A G ++V G L L++      + +G +                    
Sbjct: 32  IDGLSWGAIYALVAVGYTLVFGVLRLINFAHSEIFMLGMFGAYFCLDFILGFTPSGNAYN 91

Query: 85  --GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
              +   L + + +  + ++SG+  + +   + +      A     +        +  + 
Sbjct: 92  KGIALTVLYLVIAMLFAMLVSGSAAVGLEAVAYRPLRRRGARPLTFLITAIGMSFVLQEF 151

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +      I            +  +    +F             ++      +    + + 
Sbjct: 152 VHFILPKIIKGYGGSNAQQPITLVQPKTQFEIFGASVSNITLVIIGAALLFALLTDIAIN 211

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           RT      R +  +      +  +     +  F +     G A   +     +       
Sbjct: 212 RTKFGRGIRAVAQDPNTATLMGVSRERVIMLTFMIGGLLAGAAALLYTLKVPQGIIYSGG 271

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F   I   S  +LGG+ +L        IL  +      +    +  ++ F     +    
Sbjct: 272 FLLGIKAFSAAVLGGIGNLRGALLGGLILGVMENYGQAVFGTQWRDVVAFVLLVLVLLFR 331

Query: 323 LMVIA 327
              I 
Sbjct: 332 PTGIL 336


>gi|323487215|ref|ZP_08092518.1| hypothetical protein HMPREF9474_04269 [Clostridium symbiosum
           WAL-14163]
 gi|323399441|gb|EGA91836.1| hypothetical protein HMPREF9474_04269 [Clostridium symbiosum
           WAL-14163]
          Length = 338

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/350 (10%), Positives = 99/350 (28%), Gaps = 27/350 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            I  +R  +         +V  +   +      S + + ++   +  Y++   G S ++ 
Sbjct: 11  RILGVRGMRGALTAFAGLIVIYIAFGIINPTVFSGQNVMNLLRSMSKYLIIGIGQSYIL- 69

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G + L+      + A     L +           V+  ++    +   L      G  
Sbjct: 70  ITGNIDLSIGSVVGMSAMISATLMTHG---------VTPAVAILITLACCLVIGVINGIL 120

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           +    L         +   + +     G    D +        +      F         
Sbjct: 121 VGKFQLPPFIATLGTMFVARGVAYMVNGNRNTDAISSGIGKEAADKFQNFFYYGKTAGVY 180

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +++ + +  +   ++    +T        +  N +A      +++      + VS+  
Sbjct: 181 NTFWIAIVLFIIFFFLL---SKTRTGRHIYAVGSNVEAAKLSGVSVVATITKTYLVSAFC 237

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
             + G       +  + +     E   V + VI     LGG   L       ++   +  
Sbjct: 238 SFVVGLILCGQANMGNMEAGNMYEMYAVAAGVIGGISPLGGTGILLGTLAGASVWQTLEN 297

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPS 346
                      +++            ++V+   L+ ++    L + +  S
Sbjct: 298 GL---------NMIGVQVGIQRLVIGIIVVFAVLLDVVFRKGLFKKKRTS 338


>gi|318062057|ref|ZP_07980778.1| ABC transporter integral membrane protein [Streptomyces sp.
           SA3_actG]
 gi|318076475|ref|ZP_07983807.1| ABC transporter integral membrane protein [Streptomyces sp.
           SA3_actF]
          Length = 347

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/318 (11%), Positives = 86/318 (27%), Gaps = 25/318 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++ +LA +  +          +   +  +  Q  +  +        V   G + L+
Sbjct: 42  RTLTLVGVLAALALVGAITKPDQFIATSNLQLILTQSSVIGVVVV-GVTFVIISGGIDLS 100

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+ A  +    +      W ++  + ++  ACG+I G+     R      ATL M
Sbjct: 101 VGAIVAL-ASVWATTVATQEYGFWGILFTALLVGLACGLINGVLVAYGRLVPFI-ATLAM 158

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
               + + ++          +     L      V  +                   +++ 
Sbjct: 159 LASARGLALQITDGQTQIVSVKSVLDLGRRENYVLGIPP-----------------LVIV 201

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              +     L L RT        +  N +A       +   +L  + +S    G+A    
Sbjct: 202 FLAVVIVGWLLLNRTTFGRRSVAVGSNPEAARLAGIDVRRQRLYLYLLSGLCCGIAAFLL 261

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFY 304
                          E   + + +I      GG  ++        I   +  +    N  
Sbjct: 262 VVLVGSGQSTNGNLYELDAIAAAIIGGTLLSGGRGTIVGSVLGVLIFTTINNIFALNNLQ 321

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +       +    
Sbjct: 322 TDVQQIAKGAIIVIAVLV 339


>gi|310816372|ref|YP_003964336.1| inner-membrane translocator [Ketogulonicigenium vulgare Y25]
 gi|308755107|gb|ADO43036.1| inner-membrane translocator [Ketogulonicigenium vulgare Y25]
          Length = 308

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 61/299 (20%), Positives = 118/299 (39%), Gaps = 25/299 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
            ++   Y   + + +  YV  A   ++  G    +SL  V  + IGAY+  +L       
Sbjct: 23  PSQLDAYGVGLLLGMTGYVTLATAWALFSGPTRYISLATVAFFGIGAYTVAVLSEAMPYP 82

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + L    +A++ GA  +++GL +L+  G Y  I +  ++E+ + ++  ++    G  G Y
Sbjct: 83  MVL--ITAALVGGAVALVVGLATLRLAGVYFVIFSFGLAELVRQLVTWYEVNVTGTLGRY 140

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           +   +                          +Y+ LL +C L+  I   + R+ +  A R
Sbjct: 141 IFLPITAQQ----------------------IYWQLLALCALTFLIGWLIARSRLGLALR 178

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-FKFSENIIVI 270
            I D++         I  AKL+ F +S+  I + GA  A     + P M F  + + + +
Sbjct: 179 VIGDDEAVAAHTGINIAGAKLALFVISATLITLVGAIQAPRWTYVEPAMVFNPTTSFLTV 238

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            + +LGG   L         L  + E        ++  +L       +      V+AL 
Sbjct: 239 IMALLGGAHRLWGPILGAIPLFLLFEWLSANFPNHYAIILGLLFITIVFLVPKGVLALV 297


>gi|88854904|ref|ZP_01129570.1| putative high-affinity branched-chain amino acid transport permease
           abc transporter protein [marine actinobacterium
           PHSC20C1]
 gi|88816065|gb|EAR25921.1| putative high-affinity branched-chain amino acid transport permease
           abc transporter protein [marine actinobacterium
           PHSC20C1]
          Length = 291

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 101/303 (33%), Gaps = 24/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I  M      Y +   G++++ G LGL++        IGA++  +         ++ +  
Sbjct: 6   IVDMVGLGATYALLTIGIALLFGILGLMNFAYGEIIMIGAFAMYLF---KDYPWFVGVLA 62

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +    ++    + +   +   +  +I S      L     +T       V  + + 
Sbjct: 63  AVVFAVVVSVLTERLAFRPLRNADPVTLMIASFAVSLALQSVMRMTVLPRTQGVPPQPFL 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +   +     L+    L   + L +++T +    R   +N +
Sbjct: 123 TE----------SITVFGIRVTVLQIVTLVLCGVLLGGLALLMKKTPLGVQLRASAENFQ 172

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL     F  +SAFA++      +G    A +  +S +M   +  +I I   ++GGM
Sbjct: 173 VAKSLGVKGSFVIMSAFAIAGVMAAASGVILVARQGAVSAEM-GLTPLLIGIVGAVVGGM 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           ++          L G       +                      +  A+ +V+++R   
Sbjct: 232 SN----------LKGAALGGLLLGMGTGLLEATLPTDLIAFRDAFLYSAVMVVLVIRPQG 281

Query: 339 LLR 341
           LL 
Sbjct: 282 LLS 284


>gi|313839639|gb|EFS77353.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL086PA1]
          Length = 333

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +   I ++GIQ  +  + A+G++ V+ + G + L+     
Sbjct: 35  ALVGLIILCIALFIATPVFLTVPNIINIGIQAAVVAIMAFGMTFVIVTSG-IDLSVGSVA 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A     + S  GL  WL + +  +I    G + GL     +                
Sbjct: 94  ALSAMVSAWMFSNAGLPGWLTLIIGLLIGLLAGAVSGLAIAYGKLPAFI----------- 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  + +      +        +   ++ +    
Sbjct: 143 -----------ATLAMMSVARGLTLVISGGTPVATSDAVNQLGADVGPIPVPVIMLALAG 191

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N++A       +    ++ +A++  F G+AG   A    
Sbjct: 192 VVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALAGVFAGLAGLVLAGRLS 251

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLS-----KIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI G   S              +L  +      +N   F   
Sbjct: 252 SAQPQAGFGYELDAIAAVVIGGASLSGGSGKASGTFIGAVLLAVIRNGLNILNVSSFWQQ 311

Query: 310 LKFDCSFNMR 319
           +   C   + 
Sbjct: 312 VVIGCVIALA 321


>gi|307324498|ref|ZP_07603705.1| inner-membrane translocator [Streptomyces violaceusniger Tu 4113]
 gi|306889742|gb|EFN20721.1| inner-membrane translocator [Streptomyces violaceusniger Tu 4113]
          Length = 356

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 48/320 (15%), Positives = 103/320 (32%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +    + A+   L  F+     +      ++  Q     + A  +S+++   G   
Sbjct: 34  LARPEIGALVAAIGVYLFFFVAAPTFRQADSFATVLYQASTMGIMALAVSLLM-IGGEFD 92

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A    A +  +L  +   ++W+ + V+ ++S A G+I GL  +K       +   
Sbjct: 93  LSAGVAVTSSALTASMLSFQLTANVWVGVIVALLVSLAVGLINGLLLIKTGLPSFLVTLA 152

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               +    L   K +T+  A   + D   F             F S   ++ + +   +
Sbjct: 153 SFLMLQGANLAITKLLTDNVATDSITDMDGFDQAK-------SLFASEIDVFGVEVKSTV 205

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L     +A     L RT   N       ++++  ++   +   K++ F          G 
Sbjct: 206 LWWLIFAAIATWVLLRTKFGNWIFAAGGSKESARAVGVPVNLTKIALFMTVGFAAWFVGM 265

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
                 + +       +E   +I+ VI      GG  S         I   V +     N
Sbjct: 266 HLLFEYNTVQAGEGVGNEFYYIIAAVIGGCLLTGGYGSAIGAVLGAFIFGMVNQGIVYAN 325

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
           +              +    
Sbjct: 326 WNPDWFKFFVGVMLLLATLV 345


>gi|160937531|ref|ZP_02084892.1| hypothetical protein CLOBOL_02422 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439600|gb|EDP17350.1| hypothetical protein CLOBOL_02422 [Clostridium bolteae ATCC
           BAA-613]
          Length = 338

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/330 (11%), Positives = 95/330 (28%), Gaps = 20/330 (6%)

Query: 1   MSIFSLRLNKYDKI---LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLS 57
           M +FS +  K   +   + +L +V  + + +   +      I ++     +  + A+G+ 
Sbjct: 11  MELFSCKKTKNLILDHLIEILLLVLIIGVSIAAPSFLKSGNILNILRNAAMKGVIAYGMC 70

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           +V+   G + L+     A+       +      +  + I + A++  A   ++ L +  F
Sbjct: 71  LVI-ISGEIDLSVGSQVALSGVLAGFISKGLAEAGIMPIELGALVGIAAATLVALLTGLF 129

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                    +    I    L           G +     +          R    P    
Sbjct: 130 HAWARQKFNMPSFIITLATLNVMYGFAAIVCGGFPIANAFPTWYAFLGSGRILGIPFP-- 187

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                     +    +         +T +      +  N +A      ++   ++    +
Sbjct: 188 ---------AIVFILIFLFFWFLTEKTDLGRRIYAVGGNAEAARLNGISVWKTRIFVMCM 238

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILI 292
                 ++G   +A     +    +  E  I+ S+VI     LGG+ ++           
Sbjct: 239 VQLMCVLSGIMNSAQVRSATFTFGRGWETQIISSVVIGGTSMLGGIGTIWGTLIGVLFTG 298

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            +      +N   F   +            
Sbjct: 299 VITNAMTLLNVNEFMQYVINGALMFFAVMF 328


>gi|119962833|ref|YP_946670.1| ribose ABC transporter permease [Arthrobacter aurescens TC1]
 gi|119949692|gb|ABM08603.1| ribose ABC transporter, permease protein [Arthrobacter aurescens
           TC1]
          Length = 317

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 98/310 (31%), Gaps = 27/310 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  VV  + + L      +   + ++  Q+    M A G ++V+  LG + L+     A
Sbjct: 16  VVGLVVICIAMSLLSPYFLTPNNLINVLSQVSYIGMMAVGAALVI-ILGGIDLSVGSTMA 74

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   +   L    GL  WL +    ++    G++ GL                M      
Sbjct: 75  LSFMATAFLYKEIGLPFWLAMVCGLLLGAFIGLVNGLLVTFGHVQPFIATLATMF----- 129

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                       AG  +A  +      +     F     + ++      Y++L +     
Sbjct: 130 ------------AGAGLALYITNGNPVIGFPDWFLGLSRTRMLGIPLQVYLMLLV---FV 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              LWLR          I  N++       ++  A+   + ++     +AG    A  D 
Sbjct: 175 LAALWLRYRPSGRQLYAIGGNEEVARLSGISVRLAQARVYVIAGFLAALAGLAVGARLDS 234

Query: 256 ISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             P     S+ + VI+ V++      GG+ S+        I+  +      +N       
Sbjct: 235 AQPTAGSASDLLSVIAAVVIGGASLSGGVGSMFSTFIGLLIIGVLNNGLTLLNVSPNLQP 294

Query: 310 LKFDCSFNMR 319
           +       + 
Sbjct: 295 VVIGVVIVLA 304


>gi|300922103|ref|ZP_07138242.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 182-1]
 gi|300421505|gb|EFK04816.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 182-1]
          Length = 342

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/320 (11%), Positives = 99/320 (30%), Gaps = 17/320 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  +          S++ I ++  ++ IY + A G++ V+ + G + L+     
Sbjct: 29  VLIFMILLLIFFQSQNSNFFSERNIFNILTEVSIYGIMAVGMTFVILTAG-IDLSVGSIL 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +   +    G +   + P +         +    ++     +L         + +
Sbjct: 88  AVCAMTAAYVIK--GDNFTTVDPNAWGGMSWLIGLGICLTMGTAIGFLHGL-----GVTR 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L  +     G         +   G  +    + +R+     +  I +   +  +  + 
Sbjct: 141 LRLPPFIVTLGGMTIWRGLTLVINDGAPIAGFDQGYRWWGRGELLGISIPIWIFAIVAIG 200

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + L   +T        I  N +A       +    +S + +     G+AG   +A   
Sbjct: 201 GYLAL--HKTRWGRFVYAIGGNPEAARLAGVNVKRVLVSVYVLIGCLAGLAGFILSARLG 258

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                    S  + VI+ V++GG +                 +   +      + L    
Sbjct: 259 SAQAVA-GISFELRVIASVVIGGTS------LMGGYGRIGGTIIGSIIMGILINGLVLMN 311

Query: 315 SFNMRHTTLMVIALFLVILM 334
                   +  + + L +  
Sbjct: 312 VSAYYQQIITGLIIVLAVAF 331


>gi|241206866|ref|YP_002977962.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860756|gb|ACS58423.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 341

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 89/324 (27%), Gaps = 21/324 (6%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGI-QILIYVMFAWGLSIVVGSL 63
              L+ +  ++ +  +   L       +        ++ I Q+ +  + A G++ V+   
Sbjct: 22  PTELSIFLVLVGIALIYEVLGWMFIGQSFLMNSQRLTIMILQVSVIGIIAVGVTQVI-IT 80

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+      + A                              +  LP+       L 
Sbjct: 81  GGIDLSSGSVVGMTAMIATSFAQSSTWG-----------RAVFPSLTDLPAFVPIVVGLL 129

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           I           I     P      G++V+ R      T    +        F+  + + 
Sbjct: 130 IGAAAGLANGALIAYTKIPPFIATLGMFVSARGVAKWYTKGQPVSGITEQFHFIGTKAWP 189

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
             V L +        + LR T        I  N +A       I    +  + ++    G
Sbjct: 190 VVVFLVVA---LIFHIALRYTRYGKFTYAIGANPQAARVSGINIEAHLVKVYVIAGLLAG 246

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +AG   AA  +     M    E   + + VI      GG+  ++     T IL  +    
Sbjct: 247 LAGIVTAARAETAQASMGVGYELDAIAATVIGGTSLTGGVGRITGTVIGTIILGVMTSGF 306

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTT 322
             +    +   +            
Sbjct: 307 TFLRIDAYYQEIVKGLIIIAAVVI 330


>gi|88855355|ref|ZP_01130019.1| branched-chain amino acid ABC transporter permease protein [marine
           actinobacterium PHSC20C1]
 gi|88815262|gb|EAR25120.1| branched-chain amino acid ABC transporter permease protein [marine
           actinobacterium PHSC20C1]
          Length = 291

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 94/279 (33%), Gaps = 8/279 (2%)

Query: 49  YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGM 108
           Y + A GLS++ G +G+L+        +GA++   L  R G   W  +  S ++    G 
Sbjct: 18  YFLVASGLSLIYGLMGVLNFAHGSFLTLGAFAGWELARRMGGESWGTLIASLLLGMVVGA 77

Query: 109 IMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIR 168
           ++   +       L    +    +   + +    + +G  G            +  +   
Sbjct: 78  LVAAATEFLLIRRLYNRHIEQVLVTVGLALATVALFDGIWGTDPIYVTAPPWLSHTT--- 134

Query: 169 FFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTII 228
                          + ++     +   I+ +LR T      R   +N+    +L   + 
Sbjct: 135 ----EILGARVPNDRFLLIGAAVLVLLGIVAFLRYTRFGLVIRAGVENRSMVTALGIDVR 190

Query: 229 FAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKAT 288
            A    FA+  A  G+ G   +     +S      S  I    + ++GG+ SL+  A A+
Sbjct: 191 KAFTVVFAIGGAAAGLGGVLASHYFGYVS-PQLGGSLLIFAFIVTVIGGLGSLAGAAIAS 249

Query: 289 AILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +  + +          + ++    +  +      ++ 
Sbjct: 250 VAVAILQQFANYFLGGTGDLMVVLLLAVVLLVRPTGILG 288


>gi|50841510|ref|YP_054737.1| ribose ABC transporter [Propionibacterium acnes KPA171202]
 gi|50839112|gb|AAT81779.1| ribose ABC transporter [Propionibacterium acnes KPA171202]
          Length = 325

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +   I ++GIQ  +  + A+G++ V+ + G + L+     
Sbjct: 27  ALVGLIILCIALFIATPVFLTVPNIINIGIQAAVVAIMAFGMTFVIVTSG-IDLSVGSVA 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A     + S  GL  WL + +  +I    G + GL     +                
Sbjct: 86  ALSAMVSAWMFSNAGLPSWLTLIIGLLIGLLAGAVSGLAIAYGKLPAFI----------- 134

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  + +      +        +   ++ +    
Sbjct: 135 -----------ATLAMMSVARGLTLVISGGTPVATSDAVNQLGADVGPIPVPVIMLALAG 183

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N++A       +    ++ +A++  F G+AG   A    
Sbjct: 184 VVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALAGVFAGLAGLVLAGRLS 243

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLS-----KIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI G   S              +L  +      +N   F   
Sbjct: 244 SAQPQAGFGYELDAIAAVVIGGASLSGGSGKASGTFIGAVLLAVIRNGLNILNVSSFWQQ 303

Query: 310 LKFDCSFNMR 319
           +   C   + 
Sbjct: 304 VVIGCVIALA 313


>gi|119384890|ref|YP_915946.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119374657|gb|ABL70250.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Paracoccus denitrificans PD1222]
          Length = 325

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 91/321 (28%), Gaps = 28/321 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+    +  +  +V  +L+ L      S   I ++  Q+ +  + A G++ V+   G + 
Sbjct: 22  LHSPLALPLIGLIVVSILMGLASDNFFSLNNIMNVLRQVSVVGILAVGMTFVI-LTGGID 80

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+       L    GL   + +    +I    G+  G+     R        +
Sbjct: 81  LSVGAVMALVGTLSAGLMVNMGLPAPVALLTGLLIGLGIGLANGVLVAWGRMPA-----I 135

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I++     +      I +G   I             R  +         +IY        
Sbjct: 136 IVTLATMGMARGLGLIYSGGYPISGIPGWISWFGVGRVGVVPVPVIIMVLIY-------- 187

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                  A   + L+RTA       +  N+ A           KL+ + +S     +A  
Sbjct: 188 -------ALAWVLLQRTAFGRHVYALGGNETAARLSGVKTQRVKLAVYGISGLTSALAAV 240

Query: 248 FFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGM 301
                              +  I+ V+L      GG   +        +L  +      M
Sbjct: 241 ILTGRLMS-GQPNAGQGFELDAIAAVVLGGTAISGGRGLILGTLIGAVLLGILNNGLNLM 299

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
               +   +       +    
Sbjct: 300 GINPYLQDVIKGAIILLAIYI 320


>gi|327395864|dbj|BAK13286.1| xylose transport system permease protein XylH [Pantoea ananatis
           AJ13355]
          Length = 393

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 49/363 (13%), Positives = 101/363 (27%), Gaps = 47/363 (12%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LR  +   +L  + ++     +   GA  S + + ++  Q  I  + A G+  V+ S   
Sbjct: 24  LRNLQVLVMLGAIVLIALFFTWTTDGAWLSPRNVSNLLRQTAITGILAVGMVFVIISA-E 82

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+      +   +  I     G  + L I V+ ++    G   G      +     + 
Sbjct: 83  IDLSVGSMMGLLGGAAAIFDVWLGWPLPLTIVVTLVLGLLLGTWNGWWIAYRKVPSFIVT 142

Query: 126 TLIM-----------------------------------------SEIFQNILIKWKPIT 144
              M                                         + +   IL +W+   
Sbjct: 143 LAGMLAFRGILVGITDGTTVAPTSPAMSQIGQSYLSGGIGFGFGFAGLALFILWQWRLRL 202

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
             +                             +     +   +L +  L    +    RT
Sbjct: 203 RRQQLGLAQPAATGTVARQAITAVLVLGAIWLLNDYRGVPTPVLLLALLMLVGMFMATRT 262

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
           A       I  N  A       +   KL+ FA++   + +AG   ++     SP     +
Sbjct: 263 AFGRRIYAIGGNIDAARLSGINVARTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIA 322

Query: 265 ENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           E   + + VI      GG+ S++       I+  +      M+   F   +       + 
Sbjct: 323 ELDAIAACVIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLA 382

Query: 320 HTT 322
              
Sbjct: 383 VWM 385


>gi|254462429|ref|ZP_05075845.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2083]
 gi|206679018|gb|EDZ43505.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 434

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 87/244 (35%), Gaps = 10/244 (4%)

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
            I +  PV  +++ A   ++G  +L  R DYLAIATL ++EI   +L     +T G   I
Sbjct: 161 PILMSWPVGGLLAAAAAWLIGKTALGLRSDYLAIATLGIAEIVIAVLKNEDWLTRGVKNI 220

Query: 151 YVADRLYFLGTTVRSLIRF---------FRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
              +R       +++   F             +S +  +     +   +  +   +    
Sbjct: 221 AGLERPVPYEVDLQNSPAFVERANNFGLDAIEASTLFVKANYSLLFAAVLIILLVMFQLA 280

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR-ISPDM 260
             +      R IRDN+ A  ++   +    L  F + SA  G+AGA       + I    
Sbjct: 281 LNSPWGRMLRAIRDNEVAAEAMGKDVTARHLQVFILGSAICGLAGAMMTTLDGQLIPGTY 340

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
                  +V  +VI+GG  +         ++  +      +  +    +       +   
Sbjct: 341 QPLRFTFLVWVMVIVGGSGNNIGAILGGFLIWYLWIQVEPLGHWLMGIVTSGMAEGSALK 400

Query: 321 TTLM 324
             L+
Sbjct: 401 DHLL 404



 Score = 40.2 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 35/87 (40%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +        L ++ G T+S      +    LI  + A G+++  G  GL ++  +   A+
Sbjct: 8   VALFAIMAGLLVYTGMTESWNTALGLFNMCLISAIMALGVNLQWGYAGLFNVGVMGFVAL 67

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMIS 103
           G  + V++        W    +  +++
Sbjct: 68  GGLAAVLISHAPVTEAWSEGGLGVIVA 94


>gi|187927975|ref|YP_001898462.1| Monosaccharide-transporting ATPase [Ralstonia pickettii 12J]
 gi|187724865|gb|ACD26030.1| Monosaccharide-transporting ATPase [Ralstonia pickettii 12J]
          Length = 335

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 99/313 (31%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    V   +L         S     ++  +I   ++ A G++ ++   G + L+     
Sbjct: 32  LLAALVAMLVLFGTLSPTFFSLPTFTTIANEIPDLLVMAVGMTFILMIGG-IDLSVGSVL 90

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +  ++ G  +        +++ A GM+ G  ++ +        +L + E+ +
Sbjct: 91  ALSASVLSVAMTQLGWGLLPAALAGVVLATAAGMLTGAVTVHWGIPSFI-VSLGVLEMAR 149

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +                          + S + +   P +  I   F+  + + +    
Sbjct: 150 GLAYSLTDSR---------------TVYIGSAVDWLANPIALGIAPSFLIAIAITVVGQI 194

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +     RT        I  N++A           K++ FA+     G+A  F  +  +
Sbjct: 195 VLV-----RTVFGRYLVAIGTNEEAVRLAGVNPRPYKIAVFALMGLLSGLAALFQVSRLE 249

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+ +      I+  +      +        
Sbjct: 250 AADPNAGVGMELQVIAAVVIGGTSLMGGRGSVVRTLFGVLIISVLESGLAQIGASEPTKR 309

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 310 IITGAVIVAAVVM 322


>gi|76803453|ref|YP_327722.1| branched-chain/neutral amino acids ABC transporter permease
           [Natronomonas pharaonis DSM 2160]
 gi|76559268|emb|CAI50876.1| ABC-type transport system permease protein I (probable substrates
           branched-chain/neutral amino acids) 2 [Natronomonas
           pharaonis DSM 2160]
          Length = 294

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 95/307 (30%), Gaps = 22/307 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   IY+    G ++V G L ++         +GA++  IL    G+    L PV
Sbjct: 8   IINGLLLGGIYISVGIGFALVFGVLEVIDFAVGEYVMVGAFAGSILAVTVGVDALFLAPV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++    G  +           + +  L+       I    +       G    +    
Sbjct: 68  IFVLFYIVGFFVQPFLHHVTTSDVPMPVLMALVFTFGIAFFARGGVLTTFGPNTREVPTE 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           + T   +L      P++ +I  IF    +          + +L  T    A R I +++ 
Sbjct: 128 IATGGITLSSIGTIPTARLITGIFGVVAVSA-------FLYYLYNTDGGLAIRAIAEDRT 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   I   +  A+ + +     AG F        +              +V+L GM
Sbjct: 181 DARLMGINIARYQSVAYGMYAGLTATAGLFIG--IVFSADPGMGMQYTAFAFFMVVLAGM 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
             L  I  +  +L     +        +   + F   +             +V+L+    
Sbjct: 239 GYLPGIIVSGLLLGLAQTMFSTYVSGAWVFFVLFGIVY-------------VVLLVSPQG 285

Query: 339 LLRLRTP 345
           +L    P
Sbjct: 286 ILGRGEP 292


>gi|47568334|ref|ZP_00239036.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus G9241]
 gi|228985060|ref|ZP_04145228.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|229155546|ref|ZP_04283654.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus ATCC 4342]
 gi|47555027|gb|EAL13376.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus G9241]
 gi|228627864|gb|EEK84583.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus ATCC 4342]
 gi|228774748|gb|EEM23146.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 286

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 103/305 (33%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  +  LI  
Sbjct: 8   FVNGISTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYVLALIGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 68  IAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKVFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L     F    VI   +  +V+L    +  +++L L+RT +    R    +++
Sbjct: 116 PIGAKLPLWLQGSFTFGGVILIKYRLFVILIGIIIYIALLLLLKRTKVGLMIRAGVMDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++ + 
Sbjct: 235 GSVQGSAIASLIVGLAGAFTAYF--------------IPDLSLAINMLMLLFFLIVKPNG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|332298689|ref|YP_004440611.1| ABC-type transporter, integral membrane subunit [Treponema
           brennaborense DSM 12168]
 gi|332181792|gb|AEE17480.1| ABC-type transporter, integral membrane subunit [Treponema
           brennaborense DSM 12168]
          Length = 331

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 47/317 (14%), Positives = 94/317 (29%), Gaps = 23/317 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +     V  L+  +      S + + ++  QI   ++   G S V+   G + L+     
Sbjct: 21  VTAGLAVLCLVFGIINPTFFSGRNVSNLLRQIAPILIIGIGQSYVL-ITGNIDLSIGSVV 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       L ++     W+ + ++ +     G+I G     F+      ATL    + +
Sbjct: 80  GMSTMISATLMTKGVN-PWVSVAITLVCCLLIGLINGYLVAGFKIPPFI-ATLGTMTVAR 137

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I        N  +    A          ++   F     S +++ IF + +        
Sbjct: 138 GIAQIVNNNYNTNSIGEAAQGFRDFFYYGKTFGLFNTIWISVLLWAIFNFIL-------- 189

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                   +T        +  N +A       ++      F VS+    + G    AS  
Sbjct: 190 -------SKTRSGRYIYAVGSNPEAAKLSGVNLLGTVTKTFLVSAFCACVVGLIQCASAG 242

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + D     E   V + VI     LGG   L       +I   +               
Sbjct: 243 MGAMDAGSAYEMYAVAASVIGGISTLGGQGILLGTVVGASIWAVLQNGLQFAGAPVAIRN 302

Query: 310 LKFDCSFNMRHTTLMVI 326
           +   C   +     +V+
Sbjct: 303 IVIGCIVVVSVLLDIVV 319


>gi|225571430|ref|ZP_03780426.1| hypothetical protein CLOHYLEM_07528 [Clostridium hylemonae DSM
           15053]
 gi|225159906|gb|EEG72525.1| hypothetical protein CLOHYLEM_07528 [Clostridium hylemonae DSM
           15053]
          Length = 328

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 105/305 (34%), Gaps = 25/305 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +  +   +L+ L   +  +   + ++  Q  +  + + G+  V+   G + L+     + 
Sbjct: 18  IALMAIVVLMSLLESSFSTFDNVMTIFRQTSMLTIMSVGMLFVL-LTGAIDLSVSGILSF 76

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                 +  ++  L +   + +  + S   G++ G    K R   L    +    + Q I
Sbjct: 77  VGVFTALAATKMALPLPAAVFLGLVCSALFGLLNGFIVTKTRIPAL----IGTLAMQQVI 132

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           L     I  GK    ++     +   +   I       + V+  +  + +          
Sbjct: 133 LGISYTICGGKPVYGISPSFKQIARAMLFGIIPIPIVITVVVLALGEFLL---------- 182

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
                ++T + + +  +  N++A           +++A+ ++    G+AG    A  +  
Sbjct: 183 -----KKTYLGHYFYAVGSNEEATRLSGIDTDSVRIAAYTMNGFLAGVAGIIMLARVNSG 237

Query: 257 SPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
            P      E  ++ ++V+      GG   +S +   + I+  +      + F  +  +L 
Sbjct: 238 QPKAGSGYEMEVLTAVVVGGVRITGGEGRISSVIVGSLIMGFLSNGMVILGFNEYYQILI 297

Query: 312 FDCSF 316
                
Sbjct: 298 KGLVL 302


>gi|206901458|ref|YP_002251373.1| ribose transport system permease protein RbsC [Dictyoglomus
           thermophilum H-6-12]
 gi|206740561|gb|ACI19619.1| ribose transport system permease protein RbsC [Dictyoglomus
           thermophilum H-6-12]
          Length = 327

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 90/313 (28%), Gaps = 23/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++  +  L L L      +   I ++        +  +G+ +V+   G + L+     
Sbjct: 21  ILVILFLLSLFLSLTTETFLTSTNIFNILRAFSWIAISGFGILMVI-ITGGIDLSVGSVM 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      ++          ++    +      +                  LI      
Sbjct: 80  AMAGLITAMMLKANFGVFLSILGGIFIGGLIGFI---------------NGILISKTNLP 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +     +   +   Y     + +    +S I   ++   F+   I +  + + +    
Sbjct: 125 PFIATLGTMNIARGFCYGVTGGWPVRDLPKSFITLGQYDVPFLGVGIPLPVIFMIVLG-- 182

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               ++L RT+       +  N++A           K+  + +  A   + G    A   
Sbjct: 183 IITSIFLNRTSWGYKIYAVGGNEQAARLSGINTGRIKVLVYTLCGALTAIGGILMTARLG 242

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +P      E  ++ + VI      GG  ++  +    AI+  +      + F  +   
Sbjct: 243 VAAPTAALGYELDVIAAAVIGGASLTGGEGTVLGVIIGAAIMQVLRTGMVLLGFPAYWQP 302

Query: 310 LKFDCSFNMRHTT 322
                   +    
Sbjct: 303 SAIGAIIILAIMF 315


>gi|157149184|ref|YP_001456503.1| hypothetical protein CKO_05024 [Citrobacter koseri ATCC BAA-895]
 gi|157086389|gb|ABV16067.1| hypothetical protein CKO_05024 [Citrobacter koseri ATCC BAA-895]
          Length = 393

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 47/355 (13%), Positives = 100/355 (28%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  + V+     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIVIMLFFTWTTEGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM---- 129
             +      I     G  + L I V+  +    G   G      +     +    M    
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIVVTLALGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 130 --------------------SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
                                     +           + +      +      ++L   
Sbjct: 151 GILIGITNGTTVSPTSSAMSQIGQSYLSNGLGFTIGAISLMAFIGWQWRGRMRRQALALS 210

Query: 170 FRFPSSFVIYEIFMYYVLLGMCF-----------------LSASIILWLRRTAISNAWRT 212
               ++ V  +     ++LG  +                 L    +    RTA       
Sbjct: 211 TPASTAVVGRQALTAVIVLGAIWLLNDYRGVPTPVLLLVFLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|149188784|ref|ZP_01867075.1| putative sugar ABC transporter (permease) [Vibrio shilonii AK1]
 gi|148837445|gb|EDL54391.1| putative sugar ABC transporter (permease) [Vibrio shilonii AK1]
          Length = 339

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 92/300 (30%), Gaps = 15/300 (5%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      S   + ++  Q+    + A G++I++     + L+     A+ A     +   
Sbjct: 41  ILSPVFLSVANLLNVMTQMASIGLLALGVTIII-ITRGIDLSSGSVLAVAAVVSASMAQT 99

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
              S+        M      + + +P L           +  + I    +  +       
Sbjct: 100 IDWSM-------RMYPAMPELPIIVPILAALAVGALCGYINGALIAYTGIPPFIATLGMM 152

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                A  LY  G  V SLI  +++     I  I +  ++  +    + ++L   R    
Sbjct: 153 IVARGAALLYSDGRPVSSLIDSYQWIGQGSIVGIPVPVIIFAVMAFVSYVLLNYTR--FG 210

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                I  N+ A +     +   K+  +  +    G++    AA  +   P +    E  
Sbjct: 211 KYAYAIGGNETAAYVSGINVKRYKILVYTYAGLLAGISALILAARINSGQPGLGIMYELD 270

Query: 268 IVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + +  +      GG+ ++      T I+  +      +N   +   +            
Sbjct: 271 AIAAATVGGVSHAGGIGTIQGTIIGTMIMGVLQNGLDLLNVSAYWQQVVKGLVIIFAVMF 330


>gi|37520807|ref|NP_924184.1| branched-chain amino acid transport protein [Gloeobacter violaceus
           PCC 7421]
 gi|35211802|dbj|BAC89179.1| branched-chain amino acid transport protein [Gloeobacter violaceus
           PCC 7421]
          Length = 389

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 57/180 (31%), Gaps = 14/180 (7%)

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +  ++  + F  + V         +         +   ++ T +  A R    + +A   
Sbjct: 218 LPEVLPAWSFTLAGVQITAPQILTVGVSVTAMVLLTWLVQSTRLGKAMRATAQDIEAAQL 277

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +        +  F + S+   +AG  F      I+     F   +   +  +LGG+ ++ 
Sbjct: 278 MGINTRLIIVIVFVLGSSLAAVAGVLFGIFFKSINFF-IGFQAGLKAFTAAVLGGIGNIP 336

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  +L  +  L  G     +  +  F             I L  V+L+R   LL  
Sbjct: 337 GAVLGGLLLGLLESLGSGYISSEWKDVFAF-------------IVLVGVLLLRPSGLLGE 383


>gi|294678944|ref|YP_003579559.1| branched-chain amino acid ABC transporter permease LivH
           [Rhodobacter capsulatus SB 1003]
 gi|294477764|gb|ADE87152.1| branched-chain amino acid ABC transporter, permease protein LivH-3
           [Rhodobacter capsulatus SB 1003]
          Length = 328

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 101/324 (31%), Gaps = 33/324 (10%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV----------------- 82
            +  +  ++Y + A G  ++  S G+ +    +     A + V                 
Sbjct: 13  LNGLMAGVMYSLVALGFVLIYKSSGVFNYAQGVMALFAALTLVGIQNGQVPFAHLINAMT 72

Query: 83  ---ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +    + +   L I ++  +     + +    LK   +   I   + +      L  
Sbjct: 73  GGHLETFGWQVPAVLAILLTIGVMVGMAIAIEKLVLKHLVNQAPIILFMATIGLAYFLEG 132

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           +  +  G     +   L          +    F   F I  + +    +    L A++ +
Sbjct: 133 FGDVMWGADIKTLDVGLPQGINETVESLTGAWFGYGFFIDNLDI-VAAVVSVALVAALTV 191

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           + + +    A R + D+ +A  S+  ++ F  +  ++++     +AG  + +        
Sbjct: 192 FSQYSKQGRALRAVADDHQAALSVGISLRFIWILVWSIAGFVALVAGIMWGSKSGVQFSL 251

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                  +  + +++LGG TS+        I+    +L             +   +    
Sbjct: 252 S---LIALKALPVLMLGGFTSIPGAIVGGLIIGMGEKLFEFFIGPMIGGATENWFA---- 304

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
                 +   + ++ R   L   R
Sbjct: 305 -----YVLALIFLVFRPQGLFGER 323


>gi|302545294|ref|ZP_07297636.1| sugar ABC-type transport permease [Streptomyces hygroscopicus ATCC
           53653]
 gi|302462912|gb|EFL26005.1| sugar ABC-type transport permease [Streptomyces himastatinicus ATCC
           53653]
          Length = 356

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 97/320 (30%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +    + AV   +  F      +      ++  Q     + A  +S+++   G   
Sbjct: 34  LARPEIGALVAAVGVYIFFFAVAPTFRQADSFATVLYQGSTLGIMALAVSLLM-IGGEFD 92

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A    A +  +L  +   ++W+ + V+ +IS + G+I GL  +K       + +L
Sbjct: 93  LSAGVAVTSSALAASMLSFQLTANVWVGVGVALVISLSVGLINGLLLIKTGLPSF-LVSL 151

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               + Q + +    +          + +    +               V   +F +   
Sbjct: 152 ASFLMLQGLNLAITKLLTDNVATNAINDMDGFESAKAVFASEVTVFGVDVNITVFYWLAF 211

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
            G+            RT   N       ++++  ++   +   K++ F          G 
Sbjct: 212 AGLATWVLL------RTKFGNWIFAAGGSKESARAVGVPVNLTKIALFMTVGFAAWFVGM 265

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
                 + +       +E   +I+ VI      GG  S         I   V +     N
Sbjct: 266 HLLFEYNTVQAGEGVGNEFYYIIAAVIGGCLLTGGYGSAIGALLGAFIFGMVNQGIVYAN 325

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
           +              +    
Sbjct: 326 WNPDWFKFFVGVMLLLATLV 345


>gi|187476700|ref|YP_784723.1| branched-chain amino acid transport system permease [Bordetella
           avium 197N]
 gi|115421286|emb|CAJ47791.1| putative branched-chain amino acid transport system permease
           [Bordetella avium 197N]
          Length = 309

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 95/310 (30%), Gaps = 18/310 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS-----IW 93
                +  ++Y +   G  ++  + G+ +        + A S                + 
Sbjct: 8   FLGGLMSGMLYSLIGLGFVLIFKASGVFNFAQGAMVLVAALSMARFSEWIPRWLGFESML 67

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L   ++ ++S A   ++ +   K    +L    L    +    +  +             
Sbjct: 68  LANVLAFIVSAAIMFLLAVLIEKLVLRHLVNQDLTTLLMATLGISYFLDGLGQITFGSSV 127

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
             +          +         V+  +      L    L A++ L+ + T+   A R +
Sbjct: 128 YSINVGMPKEP-WLVLDSVFDGGVLINLEDLSAALIAALLVAALALFFQFTSTGRALRAV 186

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            D+ +A  S+   +    +  ++V+     +AG  + +            +  +  + +V
Sbjct: 187 ADDHQAAQSIGIPLNRIWVIVWSVAGLVALVAGIIWGSKFGVQFTLS---TAALRALPVV 243

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ILGG+TS+        I+    +L            ++   +          +   + +L
Sbjct: 244 ILGGLTSVPGAIIGGLIIGVGEKLSEVYLGSLVGGGIEIWFA---------YVLALVFLL 294

Query: 334 MRSHSLLRLR 343
            R   L   +
Sbjct: 295 FRPQGLFGEK 304


>gi|152996010|ref|YP_001340845.1| monosaccharide-transporting ATPase [Marinomonas sp. MWYL1]
 gi|150836934|gb|ABR70910.1| Monosaccharide-transporting ATPase [Marinomonas sp. MWYL1]
          Length = 312

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/328 (12%), Positives = 95/328 (28%), Gaps = 28/328 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLG-ATKSQKYIDSMGIQILIYVMFAWGLSIV 59
           M+    R  K      LL  ++  ++  F+     +   + ++  Q+ I  + A G++  
Sbjct: 1   MNNQLARWRKSPVFYPLLGFIFIFIMMAFINDNFLTANNLSNVARQVSINAIIAVGMTCA 60

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           +   G + L+     A+       L          ++    + +   G+     +     
Sbjct: 61  I-LTGGIDLSVGPVMALSGTIAAGLMMAGFPPEIGILGGLLVGALFGGLNGAFVA----- 114

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
            Y  +  +I++     I      I  G   I    + +        +             
Sbjct: 115 -YAKMPPIIVTLATMGIARGLGLIYTGGYPISGLPKEFAFFGRGDVMGIQTP-------- 165

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
                  ++ M  +     + L +T I      I  N++A       +   KL  + +S 
Sbjct: 166 -------IIVMVVVYIFAYILLNKTPIGRYIYAIGGNEEAARLSGVRVSRYKLMVYTISG 218

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGV 294
               +AG    +      P+     E   + ++V     I GG  ++        +L  +
Sbjct: 219 FTAAIAGMVLTSRLMSGQPNSGVGFELDAIAAVVLGGTAIAGGRGAIMGTLVGAMMLGVL 278

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                 M    +   +       +    
Sbjct: 279 NNGLNLMGVSPYVQNVIKGAIILLAIYI 306


>gi|241113623|ref|YP_002973458.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240861831|gb|ACS59497.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 373

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 85/304 (27%), Gaps = 20/304 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L +V          +  S   + ++        + A   ++++   G   L+     
Sbjct: 36  VAGLVLVVTFFFLTADRSMFSLSGVMTILAPASQLGILAIAAALLM-IGGEFDLSIGSMV 94

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A     +    + +G  +W+ I ++ +++ A G + G   ++ R     +    +  +  
Sbjct: 95  AFAGLIFGAALTNFGQPLWISIIITMLLAAAMGAVNGQIVIRTRLPSFIVTLAFLFILRG 154

Query: 135 NILIKWKPITNGKAGIYVADR--------------LYFLGTTVRSLIRFFRFPSSFVIYE 180
             L+  K  T G   +                    +    +  +         + V   
Sbjct: 155 LTLVGLKWATGGSTQLRGIGEVVGDGPLKRLFSGVAFQDLFSWLAAHGLIEKFDNGVPKV 214

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             +   ++    ++      L RT I N       +  A  +    +   K   FA+++ 
Sbjct: 215 TGVPVSVVWFIAIAGLATWVLLRTRIGNWVFAAGGDPNAARNSGVPVDRVKTGLFALTAC 274

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVV 295
              +                    E   +I+ VI      GG  S         I   V 
Sbjct: 275 AAALVAIITVLDAGSTDARRGFQKEFEAIIAAVIGGCLLTGGYGSAIGAFFGAIIFGLVS 334

Query: 296 ELCC 299
               
Sbjct: 335 IGLT 338


>gi|225571696|ref|ZP_03780660.1| hypothetical protein CLOHYLEM_07764 [Clostridium hylemonae DSM
           15053]
 gi|225159553|gb|EEG72172.1| hypothetical protein CLOHYLEM_07764 [Clostridium hylemonae DSM
           15053]
          Length = 350

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 96/319 (30%), Gaps = 10/319 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++ ++  +   +      S   + ++   + +Y + A G++ V+   G + L+      
Sbjct: 22  FIVLIILLIFFSITADNFLSAGALLTVAKHVALYGILAIGMTYVI-ITGGIDLSVGSVAG 80

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L           + +   +     + + L +L    + L I    ++     
Sbjct: 81  LAGMIAGGLIQEGLTLKMFGVTLYFSVPMIVLITVLLGALMGMINGLVITKCNVAPFIAT 140

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +   +            A      G+       F  F  +     I    ++L +  + A
Sbjct: 141 LGTMYIWRGFANIRSNGATFSEISGSEGLGNTGFEVFGRNLGGTSIPCGVLILAIIAVVA 200

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +IL  ++T       +I  N+KA       +   K+  +A S     + G    +    
Sbjct: 201 GLIL--KKTPFGWHVLSIGGNEKASKLSGIKVDRVKIWVYAFSGFCSAVVGIIATSQLVS 258

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            +P   +  E   + + V       L   + A  +      +         N  +     
Sbjct: 259 ATPKTGESWEMNAIAASV-------LGGTSMAGGVGTIGGTIVGAFVIGVINDGMTMCGV 311

Query: 316 FNMRHTTLMVIALFLVILM 334
                  +  + + + +++
Sbjct: 312 TEFWQKIIRGLVIIIAVII 330


>gi|161507800|ref|YP_001577764.1| sugar ABC transporter permease protein [Lactobacillus helveticus
           DPC 4571]
 gi|160348789|gb|ABX27463.1| Sugar ABC transporter permease protein [Lactobacillus helveticus
           DPC 4571]
          Length = 318

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/270 (11%), Positives = 73/270 (27%), Gaps = 2/270 (0%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G++++       +GA++ +I    +  +     P    + GA    +      F    L
Sbjct: 34  SGIVNIGLEGIMTVGAFTSIIFNLTFAHAFGSATPWIGALVGAIFSSIFSLLHAFATINL 93

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
               +I   +   +                            ++      P    I+   
Sbjct: 94  RADHIISGTVLNLLAPPLGVFLIKAIYEKGQTPNITANFGYTNIPGLANIPVIGKIFFTN 153

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
                     ++  +   L +T +    R+  +N +A  +L   +   +      S    
Sbjct: 154 TSAPAWWAIIITIFLWWVLYKTRLGLRLRSTGENPQAADTLGINVYKMRYIGVLTSGFMA 213

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+ GA FA S            +  + ++ VI  G  +      ++            + 
Sbjct: 214 GLGGAVFAQSISGNFSISTIVGQGFMALAAVIF-GKWNPIGAMLSSLFFGFAQS-LSIIG 271

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
                          +    + ++ L L +
Sbjct: 272 NQLPGIAKIPTVYMQIAPYVITIVVLVLFL 301


>gi|320449983|ref|YP_004202079.1| branched-chain amino acid transport system permease LivH [Thermus
           scotoductus SA-01]
 gi|320150152|gb|ADW21530.1| branched-chain amino acid transport system permease protein LivH
           [Thermus scotoductus SA-01]
          Length = 285

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 92/279 (32%), Gaps = 13/279 (4%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
              IY + A GL++ +G +G+++        +GA+   +L +  G+   L + ++ + + 
Sbjct: 14  MSGIYALVATGLALSLGVVGIVNFAHGEFLMMGAFLSYLLFAFRGVDPLLSLGLAFLAAF 73

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
             G +     ++       +  ++++     +L     +  G     VA           
Sbjct: 74  LVGALTYYGLIRPVLQAPELNQMLLTFGLSILLQNLALLLFGADTRVVAPP--------- 124

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
              +   F               L    L   +  +L R  +  A R +  N+ A   L 
Sbjct: 125 --YQGAAFHLGPFFVGAVPLGAFLLSLALLLGLHAFLTRVPLGLAMRAVAQNRLAPGLLG 182

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                  L AF +S+A  G+AG   +            F  N+   ++V L G+ +L  +
Sbjct: 183 IEAEGVYLLAFGLSAALAGVAGVMLSVMLYA--SPTVGFLFNLKAFAVVALAGLGNLKGV 240

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
             A  +L     L           +            TL
Sbjct: 241 IPAALVLALAEALVSTYVPGGGGLVEAVFFLVLFLALTL 279


>gi|319791049|ref|YP_004152689.1| inner-membrane translocator [Variovorax paradoxus EPS]
 gi|315593512|gb|ADU34578.1| inner-membrane translocator [Variovorax paradoxus EPS]
          Length = 329

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 53/333 (15%), Positives = 106/333 (31%), Gaps = 28/333 (8%)

Query: 4   FSLRLNKYDKILCLL-AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
           F  +L +    L L+  V   + + +      S   + ++ +Q  I  + A G++  +  
Sbjct: 20  FFTQLRRSTAFLPLVGLVAISVFMIVATDNFLSWGNLQNIALQSSINAIIAVGMTAAI-L 78

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G + L+     A+       +  ++GL   L +P+   +    G+  G      R   +
Sbjct: 79  TGGIDLSVGAVVALSGTLASGMMVQFGLPPMLAVPLGLAVGVVIGLFNGYCVAYLRMPPI 138

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
            +    M                          +Y  G  +  L   F F    V+  I 
Sbjct: 139 IVTLATMGIA------------------RGIALIYTGGYPIDGLPDSFAFLGGGVLAGIK 180

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +  +++   +L A ++L +           I  N++A       +   KL  +A+S    
Sbjct: 181 VPILIMLATYLVAYVLLNMA--PFGRYVYAIGGNEEATRLSGVRVSRYKLLVYALSGFTA 238

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
            +AG   AA               +  I+ V++GG              I    +   + 
Sbjct: 239 AIAGIVQAARVTS-GQPGVGVGFELDAIAAVVMGGT-----SIAGGRGAIVGTLVGALLL 292

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
               N L     S  ++      I L  + + R
Sbjct: 293 GVLNNGLNMIGVSPYLQLIIKGGIVLLAIFISR 325


>gi|317122616|ref|YP_004102619.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Thermaerobacter marianensis DSM 12885]
 gi|315592596|gb|ADU51892.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Thermaerobacter marianensis DSM 12885]
          Length = 288

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 96/296 (32%), Gaps = 28/296 (9%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            +  + A GLS++ G + L++L     Y +GAY   I  SR   + WL +    ++    
Sbjct: 18  CLLFLVAVGLSVIFGMMRLVNLATGSFYMLGAYV-GISISRATGNFWLALLGGGLVVAVL 76

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G +M    L+     L    L+   +        + I   +        +          
Sbjct: 77  GTVMERGLLRHLHGRLLEQVLLTLGLAYLFQDVARWIWGAEPQALPPPPMLAG------- 129

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                   +      +   +L     L+A + + L RT +    R   D+ +   SL   
Sbjct: 130 ----SVTVAGATIPAYRLGLLAAGAVLAAIVWVLLERTRVGAYVRAGVDDLETLASLGIN 185

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
                   FA+ +   G+ G   A          F+     +V+ ++    + S+S    
Sbjct: 186 TSRVFAVVFALGAFLSGLGGVLGAPVTGVAPGTDFEMLILALVVVVLGG--LGSVSGAIL 243

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            + +L  +  L   +              +      ++   +  ++++R   LL  
Sbjct: 244 GSLVLGVLDSLVRQL--------------WPEASLIVLYAIMAGILIVRPEGLLGR 285


>gi|265995974|ref|ZP_06108531.1| monosaccharide-transporting ATPase [Brucella ceti M490/95/1]
 gi|262550271|gb|EEZ06432.1| monosaccharide-transporting ATPase [Brucella ceti M490/95/1]
          Length = 230

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 55/188 (29%), Gaps = 5/188 (2%)

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
           W+ +       +   R +   +     +    F          +   +L +  L+    +
Sbjct: 35  WRSLLRAWRSAFDDQRSHLQQSRRSPELGNMGFDWLGFNKLFGVPIGVLVLAILAIICAI 94

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            L RTA          N++A       +   K+S + +S     +AG   ++      P 
Sbjct: 95  VLNRTAFGRWLYASGGNERAAELSGVPVKRVKVSVYVISGICAAIAGLVLSSQLTSAGPT 154

Query: 260 MFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                E   + ++VI      GG  ++        ++  + +    +    +   +    
Sbjct: 155 AGTTYELTAIAAVVIGGAALTGGRGTIQGTLLGAFVIGFLSDGLVIIGVSSYWQTVFTGA 214

Query: 315 SFNMRHTT 322
              +    
Sbjct: 215 VIVLAVLL 222


>gi|218289321|ref|ZP_03493556.1| Monosaccharide-transporting ATPase [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218240669|gb|EED07849.1| Monosaccharide-transporting ATPase [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 331

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 97/313 (30%), Gaps = 25/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L+ V   ++L     +  S   I +  + I++  + + G+++ +   G   L+     
Sbjct: 29  IVLVIVALCIILSFMSPSFLSVDNIVTTILSIVMTAIVSVGMTVAL-VSGGFDLSVGSVM 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           ++       L       +WL      + S   G+I GL   K + +   +          
Sbjct: 88  SMAGVVTGSLALNGMN-VWLAAIFGLLASLCSGLITGLFIGKVKINPFIMTL-------- 138

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                       +  +     +   G  +        F        + +  ++  +  + 
Sbjct: 139 ----------GMQGVVQGVAYVVTQGAPLSVTGVPKSFLYLGQGNLLGIPVLIWILAVVV 188

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 +RR  ++     I  N+ A +     +   K+  +  ++   G+AG    +   
Sbjct: 189 VVSDFIMRRAVVARKVYYIGSNEAAAYLSGIRVSKVKVWIYIFTALLAGIAGILTLSRFS 248

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +P   +  E   + + +I      GG  ++      + ++  V +    +N   +   
Sbjct: 249 VAAPTAGQGMELQAIAACIIGGASLTGGEGTVLGALLGSVLVGIVNDALVLLNVSVYWQS 308

Query: 310 LKFDCSFNMRHTT 322
           L          T 
Sbjct: 309 LVTGFVLIAAVTL 321


>gi|152972964|ref|YP_001338110.1| putative carbohydrate ABC transport system permease [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|329999328|ref|ZP_08303401.1| ribose ABC transporter permease protein [Klebsiella sp. MS 92-3]
 gi|150957813|gb|ABR79843.1| putative carbohydrate ABC transport system permease [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|328538354|gb|EGF64489.1| ribose ABC transporter permease protein [Klebsiella sp. MS 92-3]
          Length = 332

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 96/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +         ++  + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 31  ILPILILIVAVFGFIAPNFFTESNLLNITRQASINIVLAAGMTFII-LTGGIDLSVGSIL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A     +      +  LL   +A++ G    +     + F G    I TL      +
Sbjct: 90  GTTA--VAAMVVSLIPAFALLSIPAALMLGLLLGLFNGALVAFAGLPPFIVTLGTYTALR 147

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                          +     F      Y   + ++++    + 
Sbjct: 148 GAAYLLAD-------------------GTTVINSDISFEWIGNDYLGPVPWLVVIALAVI 188

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 189 AVCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGVMSASRLY 248

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 249 SANGNLGVGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 308

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 309 VIKGAVIIIAVLI 321


>gi|148270909|ref|YP_001245369.1| monosaccharide-transporting ATPase [Thermotoga petrophila RKU-1]
 gi|147736453|gb|ABQ47793.1| Monosaccharide-transporting ATPase [Thermotoga petrophila RKU-1]
          Length = 306

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 95/317 (29%), Gaps = 28/317 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
               + +  V   + L +      +   + ++  Q+ +  + A+G++IV+   G + L+ 
Sbjct: 9   RRYPVVVGFVALLVALSILSDRFLTISNLLNVLRQVSVQAIIAFGMTIVI-ISGGIDLSV 67

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
              +A  A     +  +  + + +L  +             +   K +   + +AT+ ++
Sbjct: 68  GSVFAFSAVVLASILKQGSIFLAMLAGLGVGALFGLFNGFVIAKAKLQPFIVTLATMAIA 127

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             F  +     PIT          R       V                       +  M
Sbjct: 128 RSFTLLYTNGMPITGFSDAFRFIGRGEIFSIPVP----------------------VFIM 165

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +       L +T +     +I  N++A       +   K+  + VS  +  ++     
Sbjct: 166 FGVFFLTWYLLSQTKLGLYAYSIGGNEEATRLSGVNVDNYKMIFYIVSGVYSAISAMILT 225

Query: 251 ASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A  +   P   +  E   + ++V     + GG  ++        I+  +      +N   
Sbjct: 226 ARLNSAQPIFGQGYELDAIAAVVLGGASLSGGKGTVFGTLFGALIMGIINNGLNLLNVSP 285

Query: 306 FNSLLKFDCSFNMRHTT 322
           F                
Sbjct: 286 FYQQAVKGSIILAAVLL 302


>gi|320012440|gb|ADW07290.1| inner-membrane translocator [Streptomyces flavogriseus ATCC 33331]
          Length = 346

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/324 (12%), Positives = 94/324 (29%), Gaps = 37/324 (11%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + +   +          S      + IQ     + A G+++V+   G + L+    +
Sbjct: 43  VLAVLLTVVIAASFVYPTFASLDNARGVTIQASFLAVVALGMTLVI-ITGGIDLSVGSVF 101

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+G            L+  LL  V     G    ++                 I      
Sbjct: 102 ALGGVLAAWASQYGFLAALLLPLVVCGGIGLLNGLL-----------------IARGNMA 144

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             ++    +   +  +            V     F       V    +   + L +    
Sbjct: 145 PFIVTLATLLGARGLLLALTDEGATTYLVPKDSAFGELGQGSVWGFGYPIVIALVLFGAG 204

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             ++   +RT+       +  +  A   +   +   K+  + +S    G+AGA  AA   
Sbjct: 205 GLVL---QRTSFGQTLFAVGGSSDAATLMGLPVARTKILVYTLSGLLAGLAGALNAARLS 261

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                +    E   + ++VI     +GG  S+S       +L  +  L            
Sbjct: 262 SGVTIVGVGMELDAISAVVIGGTLLVGGAGSISGTLWGVLLLAVIQNLIN---------- 311

Query: 310 LKFDCSFNMRHTTLMVIALFLVIL 333
            +     +   + +    L +V++
Sbjct: 312 -QIGSLNSSYQSVVSGGFLIVVVV 334


>gi|302669359|ref|YP_003832509.1| sugar ABC transporter permease [Butyrivibrio proteoclasticus B316]
 gi|302397023|gb|ADL35927.1| sugar ABC transporter permease protein [Butyrivibrio
           proteoclasticus B316]
          Length = 346

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 43/320 (13%), Positives = 98/320 (30%), Gaps = 11/320 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +   +Y   +    G     +   ++       ++ + GLSIV+   G + ++     
Sbjct: 25  IVIFFAMYLGAIIFQGGGFTKPQMFFNILNANAALIITSVGLSIVM-ISGGIDISVGGVV 83

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ +    +   ++  SI   + ++  I    G++ G         YL I   I+S    
Sbjct: 84  ALVSMCCAVYLDKHNGSILGSVCIALGIGLLYGLVQGFLV-----AYLDIQPFIVSLAGM 138

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                   I N             L  T   +     +    V    ++   L+    + 
Sbjct: 139 FFARGMTTIVNTAPFNVENPEFVALKDTKIVVPGLGSYSRKGVFIPAYVEIGLIVALVIV 198

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + + LR T +  ++  +  N+++   L   +   K  +  + S   G+AG  +     
Sbjct: 199 ILLFVVLRWTKLGRSFYAVGGNKQSALMLGINVKRTKFLSHVICSLLAGIAGYVYFLHVG 258

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             S       E   + S +I      GG+ +L         L  +  +            
Sbjct: 259 SGSASHAMGMEMNAIASSIIGGTMLTGGVGNLIGTFFGVLSLCTIQNIVASAGLDDAWWT 318

Query: 310 LKFDCSFNMRHTTLMVIALF 329
                +       +  + + 
Sbjct: 319 GITIAAMLCIFLIIQSVVMV 338


>gi|283836623|ref|ZP_06356364.1| ribose ABC transporter, permease protein [Citrobacter youngae ATCC
           29220]
 gi|291067353|gb|EFE05462.1| ribose ABC transporter, permease protein [Citrobacter youngae ATCC
           29220]
          Length = 331

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 94/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +         ++  + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 30  ILPILILIVAVFGFIAPNFFTESNLLNITRQASINIVLAAGMTFII-LTGGIDLSVGSIL 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A     +         +L   +A++ G    +     + F G    I TL      +
Sbjct: 89  GTTA--VAAMVVSLIPEFAMLSIPAALMLGLVLGLFNGALVAFAGLPPFIVTLGTYTALR 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                          +     F      Y   + ++++    + 
Sbjct: 147 GAAYLLAD-------------------GTTVINSNISFEWIGNNYLGPVPWLVVIALAVV 187

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 188 VVCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGVMSASRLY 247

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 248 SANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 307

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 308 VIKGAVIIIAVLI 320


>gi|255745720|ref|ZP_05419668.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholera CIRS 101]
 gi|262159002|ref|ZP_06030114.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae INDRE 91/1]
 gi|262169359|ref|ZP_06037051.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae RC27]
 gi|255736795|gb|EET92192.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholera CIRS 101]
 gi|262022172|gb|EEY40881.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae RC27]
 gi|262029187|gb|EEY47839.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae INDRE 91/1]
 gi|327484009|gb|AEA78416.1| Galactose/methyl galactoside ABC transport system, permease protein
           MglC [Vibrio cholerae LMA3894-4]
          Length = 335

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/326 (9%), Positives = 95/326 (29%), Gaps = 13/326 (3%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F+++  K   I  +L ++  +++     +  S + + ++  Q  + V+ A G++ ++ + 
Sbjct: 7   FAIKHLKEGAIYAVLFILLAIIVIQ-EPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQ 65

Query: 64  GLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           G   L+      + A      +        ++  +    +++    + +    +      
Sbjct: 66  G-TDLSAGRQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGV 124

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           +     +   I     +      N      V            +             +  
Sbjct: 125 IVAYLKVTPFIATLGTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSY 184

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +Y ++ + F+         +T        +  N +A       +    L  +A+S  F
Sbjct: 185 ITFYAIIAIIFMWVL----WNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVF 240

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
               G   A      + ++    E   + + V+      GG+ S++ +     I   +  
Sbjct: 241 YAFGGMLEAGRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINY 300

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               +    +   +            
Sbjct: 301 GMTYIGVSPYWQYIIKGSIIIFAVAL 326


>gi|134291967|ref|YP_001115736.1| inner-membrane translocator [Burkholderia vietnamiensis G4]
 gi|134135156|gb|ABO59481.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia vietnamiensis G4]
          Length = 286

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 104/304 (34%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++Y + A GLSIV G L  ++      Y +GAY       ++  + W+ + V
Sbjct: 8   IVNGIGVGMLYFLLAVGLSIVFGLLRFVNFAHGAFYLLGAYLCY-QALQWSANFWVALAV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ GA   I+    L+          ++ +     +L +   +  G  G  V      
Sbjct: 67  VPLVVGAFAWIVEKLVLRHVYAQQHEFHILATVGLALVLQECAILAWGPLGDNVPPPDAL 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  +              +Y  +  +V+     L+A +   L  T + +  R   ++ +
Sbjct: 127 SGVVI----------WGGFVYPKYRLFVIGFTAVLAALLWWVLDGTRLGSTVRAGSESSE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       FA+ +A   +AG   A  R        +      V+ +V    M
Sbjct: 177 MVSLLGINVTRVFSLVFALGAATAALAGVLAAPIRGVDPFMGIEALGVAFVVVVVGG--M 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +         ++  V  L   +              +      ++ +A+  V+L+R + 
Sbjct: 235 GNFLGALVGGLLVGIVQSLMSTL--------------WPEGARLMIYVAMAAVLLLRPNG 280

Query: 339 LLRL 342
           LL  
Sbjct: 281 LLGR 284


>gi|170719116|ref|YP_001784265.1| monosaccharide-transporting ATPase [Haemophilus somnus 2336]
 gi|168827245|gb|ACA32616.1| Monosaccharide-transporting ATPase [Haemophilus somnus 2336]
          Length = 375

 Score = 52.9 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 52/368 (14%), Positives = 109/368 (29%), Gaps = 47/368 (12%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M+ F     +   +L  + V+         GA  S + I ++  Q  I  + A G+  V+
Sbjct: 1   MNKFKSINLQVYIMLIAIMVIMFFFSIATEGAYLSARNISNLLRQTAITGILAIGMVFVI 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
            S   + L+      +      I    +G  + L I V+ ++    G   G      +  
Sbjct: 61  ISA-EIDLSVGSLMGLLGGFAAISNVWWGWPLPLTILVTLLLGLLIGAWSGWWVAYQKVP 119

Query: 121 YLAIATLIM----------------------------------SEIFQNILIKWKPITNG 146
              +    M                                    I    +I +  I  G
Sbjct: 120 SFIVTLAGMLAFRGILIGLTNGTTVSPISNDMTIIGQGYLSDTIGIILGSIIIFCFIAWG 179

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY-------YVLLGMCFLSASIIL 199
                    L      +      +   +  ++  I++          +L +C L+     
Sbjct: 180 SYQRKARQNLNLPVAKMPKETVKYGMIAILILGAIYLLNDYRGMPIPVLILCGLAIIGTF 239

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
             ++TA       I  N  A       +   KL+ FA++   + +AG   ++     +P 
Sbjct: 240 ISKKTAFGRHIYAIGGNIDAARLSGIAVEKVKLTIFALNGLLVAIAGLILSSRLGAGAPS 299

Query: 260 MFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             + +E   + + VI      GG+ S+  +     I+  +      ++   F   +    
Sbjct: 300 AGQNAELDAIAACVIGGASLAGGIGSIFGVVIGAFIIALLDNGMSMLDVPTFWQYIVKGG 359

Query: 315 SFNMRHTT 322
              +    
Sbjct: 360 ILLLAVWI 367


>gi|302870820|ref|YP_003839456.1| inner-membrane translocator [Caldicellulosiruptor obsidiansis OB47]
 gi|302573679|gb|ADL41470.1| inner-membrane translocator [Caldicellulosiruptor obsidiansis OB47]
          Length = 373

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 40/359 (11%), Positives = 94/359 (26%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  + +++ +   L  G   + + +  +  Q+ I  + A G+  V+   G + L+
Sbjct: 8   RTYTLIIAILLIWTIFTILTDGNFLTPRNLSMLARQMAITALVAIGMVFVI-VAGHIDLS 66

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                        +L   +G S    +    +I    G+  G            +    M
Sbjct: 67  VGSVVGFTGAIAGVLQVWHGWSTPATVLAVIVIGILIGIWQGYWIAYRGVPAFIVTLAGM 126

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI-------- 181
                 +L+  K IT                    S++        +++  I        
Sbjct: 127 LIFRGGVLLASKGITISPFKESFTFIGQGYLNKALSIVFGAVLIVGYLLLTINQRNRRKK 186

Query: 182 ---------------------------------FMYYVLLGMCFLSASIILWLRRTAISN 208
                                             +   +L +   +  +    + T    
Sbjct: 187 YNLEVLPMGLEIAKAAVVIALIAAFTGVMISYEGISIPVLILVIFTILLTFISQNTTFGK 246

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N++A       I    +  F +      +AG    +  D  +       E   
Sbjct: 247 YVYAIGGNKEAASLSGINIKNITMKIFILMGFLSALAGIVLTSRLDAATSGAGTNMELDA 306

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + ++     LGG  ++        I+  +      +N  Y   L+            
Sbjct: 307 IAAAILGGTSTLGGEGTVPGAIIGALIMASIDNGMSLLNMEYSYQLIVKGLVLVFAVWL 365


>gi|222094503|ref|YP_002528563.1| ribose ABC transporter , permease [Bacillus cereus Q1]
 gi|221238561|gb|ACM11271.1| ribose ABC transporter, permease [Bacillus cereus Q1]
          Length = 351

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/320 (10%), Positives = 90/320 (28%), Gaps = 18/320 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y      + +   +   +   +  +   I  +   I I  + A G++  +   G   L+ 
Sbjct: 40  YQFSTIAIIIGVTIFFSIVNDSFLTYNNISDILRSISIVTLLAIGVTFTLIVDG-FDLSV 98

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               ++   +       Y   + + + V  +     G++  L  ++ +   L        
Sbjct: 99  GSTASLATIAAASCLVLYRQELLVTLLVPILCGVLVGLLNALLVIRIKLPDLLAT----- 153

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                  +    I NG    +      + G +  +      F      + + +   ++ M
Sbjct: 154 -------LSIMYIVNGLHLTFSKGSSIYEGMSGATGHFIPSFLFIGQGFVLGIPVPVIIM 206

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +     L+L +T     +     N++A           ++ A+ +S     + G    
Sbjct: 207 LTVVLIAHLFLEKTTYGRFFYMTGGNREAARLAGIPTDRYRVYAYMISGLLASIGGIILC 266

Query: 251 ASRDRISPDMFKFSENIIVISI----VILGGMT-SLSKIAKATAILIGVVELCCGMNFYY 305
           +                 V +      + G    ++      + ++  ++     MN  Y
Sbjct: 267 SRVGTGQVSAGAPLLMDAVAAAYIGYAMFGAKKPNIVGTFLGSVLIGIILNGLTMMNVPY 326

Query: 306 FNSLLKFDCSFNMRHTTLMV 325
           +   +              +
Sbjct: 327 YAQDIIKGSILITALAFSFI 346


>gi|153825289|ref|ZP_01977956.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae MZO-2]
 gi|149741117|gb|EDM55176.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae MZO-2]
          Length = 337

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/326 (10%), Positives = 95/326 (29%), Gaps = 13/326 (3%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F+++  K   I  +L ++  +++     +  S + + ++  Q  + V+ A G++ ++ + 
Sbjct: 9   FAIKHLKEGAIYAVLFILLAIIVIQ-EPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQ 67

Query: 64  GLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           G   L+      + A      +        ++  +    +++    + +    +      
Sbjct: 68  G-TDLSAGRQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGV 126

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           +     +   I     +      N      V            +             +  
Sbjct: 127 IVAYLKVTPFIATLGTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSY 186

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +Y ++ + F+         +T        +  N +A       +    L  +A+S  F
Sbjct: 187 ITFYAIIAIIFMWVL----WNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVF 242

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
               G   A      + ++    E   + + V+      GG+ S+S +     I   +  
Sbjct: 243 YAFGGMLEAGRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSISGVVTGVLIFTVINY 302

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               +    +   +            
Sbjct: 303 GMTYIGVSPYWQYIIKGSIIIFAVAL 328


>gi|302524605|ref|ZP_07276947.1| sugar uptake ABC transporter [Streptomyces sp. AA4]
 gi|302433500|gb|EFL05316.1| sugar uptake ABC transporter [Streptomyces sp. AA4]
          Length = 322

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 89/302 (29%), Gaps = 30/302 (9%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
             F     S     +  +Q     + A G+++V+G+ G + L+     ++ A    +   
Sbjct: 38  IAFTKNFLSAANFRTQLVQAAPVCIVALGMALVIGTEG-IDLSVGSVMSVAAALVPLYLG 96

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
              + + ++  ++ + SG                 L    L+     Q I+     +  G
Sbjct: 97  AGPVMVIVVALIAGVASG-----------------LFSGFLVAQLGIQPIIATLALLVGG 139

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
           +    V      +            F +      + +  ++L    LS    L +RRT  
Sbjct: 140 RGLALVIAHGQLVQLHNPD------FLALGTGDVLGVPIMVLVAAVLSVLAGLLVRRTTF 193

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                 +  N+ A       +    +  +A+S A   +AG    A      P+       
Sbjct: 194 GRHLVAVGGNRPAATLAGLPVKRVLIGVYAMSGALAAIAGVLSTARLAASDPNDLGLLME 253

Query: 267 IIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           +  I+ V++      GG   +        ++  V       N     + +          
Sbjct: 254 LSAITAVVVGGTPLTGGRVRVLGTVFGALLMQLVHATLIKHNLPDSAAQMVQAAIIVAAV 313

Query: 321 TT 322
             
Sbjct: 314 YV 315


>gi|54302399|ref|YP_132392.1| putative permease of ABC transporter [Photobacterium profundum SS9]
 gi|46915821|emb|CAG22592.1| putative permease of ABC transporter [Photobacterium profundum SS9]
          Length = 332

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 41/314 (13%), Positives = 95/314 (30%), Gaps = 18/314 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + +++  L  L  +  + L +      +   I  M +   I  + A GL  VV   G + 
Sbjct: 13  IKRHEFYLAALIGLMVVGLGISSEDFLTLGNIFDMSVSSAILGIMACGL-FVVLIAGGID 71

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++     AI  Y         G + ++   ++A++    G+I  +   K +      A +
Sbjct: 72  ISFPATAAIAQYVMATYVLSIGGNFFIAFLIAAVVGMLLGLINAILVYKLKVP----AII 127

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I               +NG       D                        Y+  +   +
Sbjct: 128 ITISTLNVFFGLLIYFSNGAWLYGFPDWFMDGVELFT--------FVGSDGYDYGLSLPI 179

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +  +       + +T +      +  N  A   +   +    L  +    A  G+A  
Sbjct: 180 IMLVAVVLFTSFLMSKTRLGRQIYAMGGNADAASRIGINLFGIHLFVYGYMGALAGIASV 239

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
                   ++P+     E  ++ ++V     + GG  +L  +    A+L  +      + 
Sbjct: 240 VQTQITQSVAPNSLMGFELTVLAAVVLGGTSMTGGKGTLIGVVLGVALLAILKNGLTLLG 299

Query: 303 FYYFNSLLKFDCSF 316
              +   +      
Sbjct: 300 VPSYWHAVVTGLII 313


>gi|295129544|ref|YP_003580207.1| ribose ABC transport system, permease protein RbsC/ribose ABC
           transport system, periplasmic ribose-binding protein
           RbsB [Propionibacterium acnes SK137]
 gi|291377351|gb|ADE01206.1| ribose ABC transport system, permease protein RbsC/ribose ABC
           transport system, periplasmic ribose-binding protein
           RbsB [Propionibacterium acnes SK137]
 gi|313771192|gb|EFS37158.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL074PA1]
 gi|313811784|gb|EFS49498.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL083PA1]
 gi|313832318|gb|EFS70032.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL007PA1]
 gi|313832778|gb|EFS70492.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL056PA1]
 gi|314975212|gb|EFT19307.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL053PA1]
 gi|314977627|gb|EFT21722.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL045PA1]
 gi|315097148|gb|EFT69124.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL038PA1]
 gi|327332514|gb|EGE74249.1| ribose ABC transporter, permease protein [Propionibacterium acnes
           HL096PA2]
 gi|327334573|gb|EGE76284.1| ribose ABC transporter, permease protein [Propionibacterium acnes
           HL097PA1]
 gi|327448850|gb|EGE95504.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL043PA1]
 gi|328759798|gb|EGF73390.1| ribose ABC transporter, permease protein [Propionibacterium acnes
           HL099PA1]
          Length = 333

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 98/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +   I ++GIQ  +  + A+G++ V+ + G + L+     
Sbjct: 35  ALVGLIILCIALFIATPVFLTVPNIINIGIQAAVVAIMAFGMTFVIVTSG-IDLSVGSVA 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A     + S  GL  WL + +  +I    G + GL     +                
Sbjct: 94  ALSAMVSAWMFSNAGLPGWLTLIIGLLIGLLAGAVSGLAIAYGKLPAFI----------- 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  + I      +        +   ++ +    
Sbjct: 143 -----------ATLAMMSVARGLTLVISGGTPIATSDAVNQLGADVGPIPVPVIMLALAG 191

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N++A       +    ++ +A++  F G+AG   A    
Sbjct: 192 VVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALAGVFAGLAGLVLAGRLS 251

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLS-----KIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI G   S              +L  +      +N   F   
Sbjct: 252 SAQPQAGFGYELDAIAAVVIGGASLSGGSGKASGTFIGAVLLAVIRNGLNILNVSSFWQQ 311

Query: 310 LKFDCSFNMR 319
           +   C   + 
Sbjct: 312 VVIGCVIALA 321


>gi|296104813|ref|YP_003614959.1| AI-2 transport system permease protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295059272|gb|ADF64010.1| AI-2 transport system permease protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 343

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 91/306 (29%), Gaps = 26/306 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K  ++   LA++    + + L           M       ++     + +V     + ++
Sbjct: 6   KNRELSAFLAILALFAVLVALNPAYLSLQTLGMIFASAQILILLALGAALVMLTRNIDVS 65

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 + A +  +     G S+ + +  +  +    G   G   +  R   +       
Sbjct: 66  VGSTVGLSAIAVGV-ALNNGYSLPVSMLFALSVGALAGAFNGFLVVALRIPAIVATL--- 121

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                           G  G+Y    L + G      +      S      + +  + + 
Sbjct: 122 ----------------GTLGLYRGAMLLWTGGKWIEGLPP-GLKSLSEPVAVGISPLGMV 164

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           + FL+A     L RTA    +  + DN  A   L   +   ++ AF ++      AG  F
Sbjct: 165 VLFLAAVGAWTLSRTAFGRDFYAVGDNLAAARQLGVAVNRTRMIAFTLNGMLAACAGIVF 224

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AA    +        E   + + V     +LGG  +L         L  +  +       
Sbjct: 225 AAQIGFVPNQTGSGLEMKAIAACVLGGISLLGGTGTLIGALLGAFFLTQIDTVLVLFKLP 284

Query: 305 YFNSLL 310
            + +  
Sbjct: 285 AWWNDF 290


>gi|293393446|ref|ZP_06637757.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
 gi|291424047|gb|EFE97265.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
          Length = 329

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/289 (10%), Positives = 83/289 (28%), Gaps = 18/289 (6%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             +   +  +     I  + A GL  VV   G + ++     AI  Y        +G S 
Sbjct: 35  FLTLGNLTDVATSYAILGILACGL-FVVLIAGGIDISFPAITAIAQYVMASWIITHGGSF 93

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            L   ++  +    G++ G      +          +      + + +  +     G ++
Sbjct: 94  PLAFAMAIGVGLLLGLMNGFLVYWLKVP-------AIIITIATLNLFYGLLVYATNGTWL 146

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                +    +            + +    +  + + +          +  T +      
Sbjct: 147 YGFPDWFMDGINWFSFTAGDGYDYGLTLPLLCLLAVIIVTGVL-----MNFTRLGRQIFA 201

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +  N+ A   L   ++      +       G+A    A     ++P+     E  ++ ++
Sbjct: 202 MGGNRDAASRLGLNLLRLHFYVYGYMGILAGIAAVVQAQITQSVAPNSLLGFELTVLAAV 261

Query: 273 V-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           V     + GG  SL+       +L  +      ++   +   +      
Sbjct: 262 VLGGTSMTGGRGSLTGTLLGVVLLAFLQNGLTLLSVSSYWHTVFSGLII 310


>gi|220932782|ref|YP_002509690.1| Monosaccharide-transporting ATPase [Halothermothrix orenii H 168]
 gi|219994092|gb|ACL70695.1| Monosaccharide-transporting ATPase [Halothermothrix orenii H 168]
          Length = 383

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 45/359 (12%), Positives = 102/359 (28%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   ++  + +++ +   +  G+  + + + ++  Q +   + A G+ +V+  LG + L+
Sbjct: 13  KTYMMVIAVVLIWVIFTAITGGSFLTPRNLSNLFRQSVFTSILAIGMVMVI-ILGQIDLS 71

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +      I     GL+  + I V+ +I    G+  G      +     +    M
Sbjct: 72  VGSIVGLTGGIIAIFDVWMGLNPVISILVTLVIGVLLGLWNGYWVAYKKVPSFIVTLGGM 131

Query: 130 SEIFQNILIKWKPITNGKAGIYV--------------------ADRLYFLGTTVRSLIRF 169
                 ++   +  T G  G                          + +     R     
Sbjct: 132 LIFRGILIGITQGTTIGPMGDLYYYIGKEYLSKSLGIILSVLVIAYIIYYQYKTRRNKLQ 191

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASII---------------------LWLRRTAISN 208
           + F    +  EI     ++    +   ++                        R T    
Sbjct: 192 YNFEVLPMKLEIVKSIAVVLAVIIFVFVMNSYQGIPVPLLLLLVLLFLFSFVTRNTVFGR 251

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N +A       I    L  F ++     + G    +  +  S      +E   
Sbjct: 252 YIYAIGGNNEAASLSGINIKKITLIVFMLNGLLAAIGGILLTSRLNAASVAAGTNAELDA 311

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + VI     +GG+ S+        ++  +      MN   F   +       M    
Sbjct: 312 IAACVIGGASLMGGIGSVGGAVIGAIVMASLDNGMSLMNVPMFWQSIVKGLVLIMAVWF 370


>gi|331008179|gb|EGH88236.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 293

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 90/305 (29%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A ++V L  R     W  +  
Sbjct: 8   LIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGAMVLFAALTFVSLLERGVPFFWAFLAT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A +     +I  +           I  +    +   I    + +               
Sbjct: 68  LASMVVLALLIERMVLRPLVNRPPIILFMATLGLSYMIEGLAQALWGA------------ 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F  +       L  ++ L   RT I  + R + D+  
Sbjct: 116 QVHGLELGIPDEPLEIRGMLLSQFDLFAAGTAAALVIALSLLFNRTRIGLSLRAVADDPL 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +       +AV+     +AG  + A               +  + ++I+GG 
Sbjct: 176 ASLAVGIRLPRIWAVVWAVAGFVGLVAGLLWGARLGVQFSLS---LVGLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S+        I+    +L          S ++              +   L +L+R   
Sbjct: 233 SSIGGAIVGGLIIGAAEKLAEIYLGPIIGSGIENWVP---------YVLALLFLLVRPAG 283

Query: 339 LLRLR 343
           L   R
Sbjct: 284 LFGER 288


>gi|330985410|gb|EGH83513.1| inner-membrane translocator [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 325

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/322 (11%), Positives = 96/322 (29%), Gaps = 27/322 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LRL+     L L+ ++  L++        + +    +  Q  I  + A G++ V+     
Sbjct: 18  LRLSVDRFGLPLVFILLCLVMAFASEYFMTWRNWMDILRQTSINGILAVGMTYVI-LTKG 76

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A       ++ ++    +  +       +    +   + +      ++A  
Sbjct: 77  IDLSVGSILAFAGLCSALVATQGYGLLAAVSAGMFAGAMLGVVNGFMVANLSIPPFVATL 136

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            ++        ++                     G+ V  L   +       +  I +  
Sbjct: 137 GMLSIARGMTFILN-------------------DGSPVTDLPEEYLALGIGRVGPIGVPI 177

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++  +  L   ++L  R T        +  N+K+  +    +     S + VS    G+A
Sbjct: 178 IIFAVVALIFWMVL--RYTTYGRYVYAVGGNEKSARTSGIGVRKVMFSVYVVSGLLAGLA 235

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G   +A      P      E   + ++VI      GG  S+        ++  +      
Sbjct: 236 GVVLSARTTSALPQAGMSYELDAIAAVVIGGTSLSGGTGSIVGTLFGALLIGVINNGLNL 295

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +    +   +            
Sbjct: 296 LGVSSYYQQVAKGLIIVFAVLI 317


>gi|320665708|gb|EFX32745.1| putative permease of ribose ABC transport system [Escherichia coli
           O157:H7 str. LSU-61]
          Length = 324

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/313 (9%), Positives = 92/313 (29%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +         ++  + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 23  ILPILILIVAVFGFITPNFFTESNLLNITRQASINIVLAAGMTFII-LTGGIDLSVGSIL 81

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A + +++      ++  +     +          L +      ++            
Sbjct: 82  GTTAVAAMVVSLSPEFAMLSIPAALMLGLLLGLFNGALVAFAGLPPFIVTLGTYTELRGA 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+                           +     F      Y   + ++++    + 
Sbjct: 142 AYLL---------------------ADGTTVINSNINFEWIGNNYLGPVPWLVVIALAVI 180

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 181 VVCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGIMSASRLY 240

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 241 SANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 300

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 301 VIKGAVIIIAVLI 313


>gi|307941867|ref|ZP_07657221.1| monosaccharide-transporting ATPase [Roseibium sp. TrichSKD4]
 gi|307774964|gb|EFO34171.1| monosaccharide-transporting ATPase [Roseibium sp. TrichSKD4]
          Length = 370

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 43/332 (12%), Positives = 92/332 (27%), Gaps = 23/332 (6%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I+  +AV    LLF       + + + +  +    +++ A G  +++   G   L+   
Sbjct: 28  GIVGTIAVFVLFLLFASDSGMFASQGVLNWSLVSAQFMIIAVGACLLM-IAGEFDLSVGS 86

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
                     + G   G  +WL I  +  I  A G + G   +K       +    +  +
Sbjct: 87  MIGFAGMMVAVFGVVLGWPMWLTILTTFAICMAIGALNGWIVVKTGLPSFIVTLAFLFIL 146

Query: 133 FQNILIKWKPITNGK-----------------AGIYVADRLYFLGTTVRSLIRFFRFPSS 175
               +   + I                      G  +   L+     +  +  F R   +
Sbjct: 147 RGFTIFIPQTIERKTIIGGIRDAAEGDWLAPIFGGKIGQPLFQWLGDIGVIDVFERGSRA 206

Query: 176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +  +++    L     + L +T   N       + +A  +    +   K+  F
Sbjct: 207 GQPVVDGVPMLIVWAIALVIFGHILLTKTRFGNWIFASGGDAEAARNSGVPVNRVKILMF 266

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAI 290
             ++    +              D     E   +I++VI      GG  S+   A    I
Sbjct: 267 VFTAFCATVFATCQVMEFGSAGADRGLLKEFEAIIAVVIGGALLTGGYGSVLGAALGALI 326

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
              V +             +            
Sbjct: 327 FGVVQQGLFFAGVESSLFRVFLGIILLAAVIL 358


>gi|283835644|ref|ZP_06355385.1| ribose ABC transporter, permease protein [Citrobacter youngae ATCC
           29220]
 gi|291068859|gb|EFE06968.1| ribose ABC transporter, permease protein [Citrobacter youngae ATCC
           29220]
          Length = 342

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/320 (11%), Positives = 98/320 (30%), Gaps = 17/320 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  +          S++ I ++  ++ IY + A G++ V+ + G + L+     
Sbjct: 29  VLIFMILLLIFFQSQNSNFLSERNIFNILTEVSIYGIMAVGMTFVILTAG-IDLSVGSIL 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +   +    G +   + P +         +    ++     +L         + +
Sbjct: 88  AVCAMTAAYVIK--GDNFTTVDPNAWNGMSWLIGLGICLAMGTVIGFLHGL-----GVTR 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L  +     G         +   G  +      +R+     +  I +   +  +  + 
Sbjct: 141 LRLPPFIVTLGGMTIWRGLTLVINDGAPIAGFDAGYRWWGRGELLGISIPIWIFALVAVG 200

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + L   +T        I  N +A       +    +S + +     G+AG   +A   
Sbjct: 201 GYLAL--HKTRWGRFVYAIGGNPEAARLAGVNVRRVLVSVYVLIGCLAGLAGFILSARLG 258

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                    S  + VI+ V++GG +                 +   +      + L    
Sbjct: 259 SAEAVA-GISFELRVIASVVIGGTS------LMGGYGRIGGTIIGSIIMGILINGLVLMN 311

Query: 315 SFNMRHTTLMVIALFLVILM 334
                   +  + + L +  
Sbjct: 312 VSAYYQQIITGLIIVLAVAF 331


>gi|237729569|ref|ZP_04560050.1| sugar transport system permease [Citrobacter sp. 30_2]
 gi|226908175|gb|EEH94093.1| sugar transport system permease [Citrobacter sp. 30_2]
          Length = 342

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/320 (12%), Positives = 93/320 (29%), Gaps = 17/320 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  +   L      S++ I ++  ++ IY + A G++ V+ + G + L+     
Sbjct: 29  VLIFMILLLIFFQLQNSNFLSERNIFNILTEVSIYGIMAVGMTFVILTAG-IDLSVGSIL 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +   +      +         M       I           +    T +    F 
Sbjct: 88  AVCAMTAAYVIKGDNFTTVDPNAWGGMSWLIGLGICMAMGTAIGFLHGLGVTRLRLPPFI 147

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L        G         +   G  +      +R+     +  I +   +  +  + 
Sbjct: 148 VTL-------GGMTIWRGLTLVINDGAPIAGFDAGYRWWGRGELLGISIPIWIFALVAVG 200

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + L   +T        I  N +A       +    +S + +     G+AG   +A   
Sbjct: 201 GYLAL--HKTRWGRFVYAIGGNPEAARLAGVNVKRVLVSVYVLIGCLAGLAGFILSARLG 258

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                    S  + VI+ V++GG +                 +   +      + L    
Sbjct: 259 SAEAVA-GISFELRVIASVVIGGTS------LMGGYGRIGGTIIGSIIMGILINGLVLMN 311

Query: 315 SFNMRHTTLMVIALFLVILM 334
                   +  + + L +  
Sbjct: 312 VSAYYQQIITGLIIVLAVAF 331


>gi|89053374|ref|YP_508825.1| inner-membrane translocator [Jannaschia sp. CCS1]
 gi|88862923|gb|ABD53800.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Jannaschia sp. CCS1]
          Length = 316

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 40/317 (12%), Positives = 98/317 (30%), Gaps = 27/317 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L  Y   L  + +     + L      S + + ++ +Q     + A GL   + S G + 
Sbjct: 12  LQNYIVYLGFIVIFLFFAVTLHDAGFTSSRNLTNIVLQTAPATIMAIGLVFAL-SAGEID 70

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+   A A+ A S  ++     + + +L  + A ++      + +  L+     + +ATL
Sbjct: 71  LSFGSAVAVSALSAAVVMQVLPMPVAVLAGLGAGLAVGAFNGILVAWLRLPSFLVTLATL 130

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +       +   + I                     S+   F          + +  ++
Sbjct: 131 GLFAGVARTMTDLRSI---------------------SVTNDFFTGFFGSGDLLGIPSLV 169

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                  A      R T          DN +A       +   +     +     G+AG 
Sbjct: 170 WWTAIGVAIGHFVYRHTRFGAHVLATGDNARAAQVSGIKVPRVRFMVLTICGGCAGLAGL 229

Query: 248 FFAASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMN 302
            +A      +  + +    I++ ++++      GG  S+      + ++  +      M 
Sbjct: 230 LYAGRLQSATYTLGESDLMIVIAAVIVGGTALNGGKGSIIGALIGSLLMGMLNNGLILMG 289

Query: 303 FYYFNSLLKFDCSFNMR 319
               + ++       + 
Sbjct: 290 LQVSDQMIVRGLIILVA 306


>gi|329906615|ref|ZP_08274462.1| inner-membrane translocator [Oxalobacteraceae bacterium IMCC9480]
 gi|327547213|gb|EGF32070.1| inner-membrane translocator [Oxalobacteraceae bacterium IMCC9480]
          Length = 320

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 46/301 (15%), Positives = 105/301 (34%), Gaps = 18/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               +I  + A GL+++ G + +L+    +  A+GA+  V +       +        + 
Sbjct: 32  LAMGMIIFIIASGLTLIFGLMDVLNFGHGVFIALGAFVAVSVLGALPEWVNADHLGLNLS 91

Query: 103 SGACGMIMGLPSLKFRGDYLAI--ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           + A  MI  + +    G          +  +  + ILI    +  G+  I V      + 
Sbjct: 92  ALALAMIAAMLAAGAVGFVFERVIVRRVYGQHLKQILITMGGMVVGEELIKVIWGAQQIA 151

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             + + +R         I +  +  +++G+    A ++L L RT +    R    +++  
Sbjct: 152 LPLPAALRGALIVGDAAIEKYRVLAMVVGLVVFGA-MMLVLNRTKLGLLIRAGVQDREMV 210

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            SL   I    +  F V SA  G+ G  +   +  +         N+++  ++I+GG+ S
Sbjct: 211 ESLGYRIRQLFVGVFVVGSALAGLGGVMWGLYQQNV-IPQMGAQVNVLIFIVIIIGGLGS 269

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
                    ++  +      +                       ++ +  ++L R   L 
Sbjct: 270 TGGCFLGALLVGLLANYTGFLVPKVALFSN--------------ILLMGAILLWRPRGLF 315

Query: 341 R 341
            
Sbjct: 316 P 316


>gi|297625876|ref|YP_003687639.1| ABC transporter permease protein for sugars [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296921641|emb|CBL56198.1| Probable ABC transporter permease protein for sugars
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 342

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 42/337 (12%), Positives = 102/337 (30%), Gaps = 32/337 (9%)

Query: 6   LRLNKYDKILCLLAVVYPLLLF---LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
           L++++         V++ +++       G T +     ++ I     ++ A G++ V+  
Sbjct: 19  LKIDRKRIPTLASVVIFLIMIIYGQAAYGQTLTMSTASNLLINNAHLIILAVGMTFVI-L 77

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G + L+     A  +          G +  L++ +  ++ G  G+  G+    FR    
Sbjct: 78  TGGIDLSVGAVIAFSSVLGA-QLLNAGWNPVLVMGIIVVVGGLFGLASGVLVQYFRVQPF 136

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
                         L          + +          +  R+L   ++      + ++ 
Sbjct: 137 IAT-----------LAMMFLARGLASILSTTPIRLDDASGFRTLATQWKVIDGPKVNDLV 185

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +   +L    +  +    L RT        I  ++ +   +   +   K   + +S    
Sbjct: 186 ITPNVLIAVVVVVAGFFILHRTRTGRTVYAIGGSEPSAELMGLPVNRTKYLIYVISGLCA 245

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVEL 297
           G+A   + +             E   + ++VI     LGG   +        +L  +  L
Sbjct: 246 GIASVVYTSKLGMAQNVTGVGWELDAIAAVVIGGTLLLGGAGYVLGSVLGALVLGLMNVL 305

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
                                  T +    L L +L+
Sbjct: 306 IAR-----------DGSIPPEATTIITGAILLLFVLL 331


>gi|84501430|ref|ZP_00999635.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
 gi|84390721|gb|EAQ03209.1| branched-chain amino acid ABC transporter, permease protein
           [Oceanicola batsensis HTCC2597]
          Length = 320

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/325 (11%), Positives = 103/325 (31%), Gaps = 33/325 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---------------- 82
             +  +  ++Y + A G  ++  + G+ +    +     A + V                
Sbjct: 4   FLNGLMAGVLYALVALGFVLIYKASGIFNYAQGVMALFAALTLVGIMEGQVPFSHLINAI 63

Query: 83  ----ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               +    + L   + I ++ ++       +    ++   +   I   + +      + 
Sbjct: 64  FGTEVHHFGWHLPAVVGIVLTIVVMIGLAWAVNAFIMRHLVNQEPIILFMATIGLAYFME 123

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +  G     +   L     T      +  F   F I  + + +  +    L A+++
Sbjct: 124 GLGDLMWGADIKKLDVGLPQGINTAIDEATYDFFGYGFFIDNLDI-WATVIAIILVAALM 182

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           L+ + T    A R + D+ +A  S+  ++ F  +  ++++     +AG  + A       
Sbjct: 183 LFSQYTKQGRALRAVADDHQAALSVGISLNFIWVLVWSIAGFVALVAGIMWGAKSGVQFS 242

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                   +  + +++LGG TS+        I+    +L             +   +   
Sbjct: 243 LS---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFAIGPLVGGATENWFA--- 296

Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343
                  +   + ++ R   L   +
Sbjct: 297 ------YVLALIFLVFRPQGLFGEK 315


>gi|312961483|ref|ZP_07775985.1| ribose ABC transporter, permease protein [Pseudomonas fluorescens
           WH6]
 gi|311284280|gb|EFQ62859.1| ribose ABC transporter, permease protein [Pseudomonas fluorescens
           WH6]
          Length = 335

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 86/292 (29%), Gaps = 27/292 (9%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +   ++  Q+ +  + A G++ V+  +G + L+     A        L     + +   I
Sbjct: 54  RNGLNILDQVTVLGILAIGMTAVI-VIGGIDLSVGSVLAFSMMMLGWLYQDQAVPLGFAI 112

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P+S       G++ G      +                  L            +    ++
Sbjct: 113 PISIATGMLAGLVSGGLITYAKLPPFIAT-----------LTMMSVARGLANILTEGRQV 161

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                   SL     F        +F+  +L+          ++LR  A       +  +
Sbjct: 162 VGFPEWFTSLATVRHFGFLSATVGLFLVMLLVA--------WVFLRFRAGGRNLYAMGGS 213

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL- 275
            +        +    L  +A+S A  G+A    AA  D  S      S  +  I+ V++ 
Sbjct: 214 PEVARLSGIKVRAITLWVYAISGALAGIAAVTLAARLDS-SQPSAGLSLELDAIAAVVIG 272

Query: 276 -----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                GG+ S+        I+  +      +    F   +       +  T 
Sbjct: 273 GASLSGGVGSIGGTLVGVLIIGVLRNGLNLLGVSPFIQQVVIGVVIALAVTI 324


>gi|153809632|ref|ZP_01962300.1| hypothetical protein RUMOBE_00013 [Ruminococcus obeum ATCC 29174]
 gi|149833810|gb|EDM88890.1| hypothetical protein RUMOBE_00013 [Ruminococcus obeum ATCC 29174]
          Length = 341

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/316 (11%), Positives = 99/316 (31%), Gaps = 8/316 (2%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++  V   +++       +   + ++     +  +   G+ ++    G + L+     A+
Sbjct: 22  IIVFVAIFIVYALTTNGLTWSGMMNVFRHSAVIGIIGLGMGLIC-ITGEIDLSVGSMLAL 80

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                VI+      SI L    + +    CG+I G+     +         I++     I
Sbjct: 81  DGGFSVIIF-NMTNSIILTFLFAVLFGAFCGLINGVMVGWIQMPAF-----IVTLATMLI 134

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
              +           +      +     S   +    +        +  V L +  ++  
Sbjct: 135 YRSFAQYFCQHVDKALIGGGSSVYKMANSQSSYQTLYNFGNGKVSTIPIVGLILIIMTLV 194

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +     T        +  N K            K+S F ++ A +G+    + A     
Sbjct: 195 FVYITTSTKYGKKVYAVGSNMKGAQMAGINTAVVKISVFVIAGALVGIGAFLWIAMNASA 254

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
            P     S  +  I+  +LGG+ S+S        ++        ++    +  +    + 
Sbjct: 255 DPATTGNSYEMYAIAAAVLGGI-SMSGGKGKCLGILFGAMSYTIIDKIIVSLKMDSLINN 313

Query: 317 NMRHTTLMVIALFLVI 332
            ++   L+++ +  ++
Sbjct: 314 AIKGIILLIVIMVQIV 329


>gi|296161910|ref|ZP_06844710.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295887786|gb|EFG67604.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 343

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 55/305 (18%), Positives = 110/305 (36%), Gaps = 18/305 (5%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                 Y   +     +  + A  L+++ GS GL SL      AIGA+S  IL +++GL 
Sbjct: 37  PFALGGYGLYIASSGGVMALGAMALTVLSGSAGLPSLGTAAFMAIGAFSAGILATQWGLG 96

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           +   + ++ ++  A G  + L +L+  G YLA+ TL +  + Q +           +G  
Sbjct: 97  MLPALLLALVLGFAAGAGVALLTLRVSGLYLAVGTLALQHVVQIVATDLDLKFTYASGFM 156

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           +                +                + + +      +   L+R  +   W 
Sbjct: 157 LESPHIAGLAIDTPAKWWG---------------MTIVLLLGVYVLFRSLQRGHVGREWA 201

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +R    A  +L  + + A+L+ FA++SA I  +GA        +    +     I+ ++
Sbjct: 202 LLRMEPTAAATLGVSPVRARLTVFALTSAVIAASGAIDGYRLGNVQATGYSLHLAIMYLT 261

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
           +V LGG   L     A+  ++ + +    +                     L+   L   
Sbjct: 262 VVALGGAGGLVGAVVASYAIVVLPDAIAAVLATLGIDA---TTRLAGIDNMLLGALLVCA 318

Query: 332 ILMRS 336
           +L   
Sbjct: 319 LLDLP 323


>gi|261323699|ref|ZP_05962896.1| inner-membrane translocator [Brucella neotomae 5K33]
 gi|261299679|gb|EEY03176.1| inner-membrane translocator [Brucella neotomae 5K33]
          Length = 275

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 55/173 (31%), Gaps = 15/173 (8%)

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
                        +YY+ L     S  ++  L  T        +R+N      L   +  
Sbjct: 16  MPAWGFDFGSTTEVYYLALAWVVGSILLLFLLTLTPFGRVTVGLRENTHRLRFLGYNVHV 75

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA 289
                FA+S+ F G+AGA  A + +  +  +F+   +  V+    +GG+ +    A   A
Sbjct: 76  LGTLVFAISAMFAGIAGALQAINIEAANYVVFEAGISTAVVLNSFIGGVGTFFGPAIGAA 135

Query: 290 ILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            +     +   +   +                    +   LV++     L+  
Sbjct: 136 AMTFFGHVTSDVTRSW---------------LLYQGLIFVLVMMFLPRGLVGE 173


>gi|163735176|ref|ZP_02142612.1| ribose ABC transporter, permease protein [Roseobacter litoralis Och
           149]
 gi|161391634|gb|EDQ15967.1| ribose ABC transporter, permease protein [Roseobacter litoralis Och
           149]
          Length = 326

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 91/316 (28%), Gaps = 18/316 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
            + IL     V  +L+        +   + ++       ++ A G  +V+     + L+ 
Sbjct: 8   RETILAAAIAVLLILIASRFSGFVAPSNLVNVFNDTAPLIILALGQMVVI-LTRCIDLSV 66

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A+   +  ++   +       I   A+  G     +    +        + TL   
Sbjct: 67  AANLALTGMAVAMINVAFPGLPIPFIIAIAICLGGAMGAINGLLVWKLPIPPIVVTLGTM 126

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            IF+ I+                  L   G  V +      F        + +  +    
Sbjct: 127 TIFRGIIF-----------------LISDGKWVNAHEMSEGFTGFPRAAVLGLPILSWCA 169

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                   + + RT +  +   +  N  A       +   +  AF +S A  G+ G  + 
Sbjct: 170 VLTVIIFAVMMSRTPLGRSIFAVGGNPHAAVYTGIDVGKTQFKAFVISGALAGLTGYLWV 229

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           A       D+    E  +V + VI G   +    +   A+L  +            N   
Sbjct: 230 ARYAVAYVDIAGGFELEVVAACVIGGISIAGGIGSVGGAVLGALFLGVVKNALPVVNISP 289

Query: 311 KFDCSFNMRHTTLMVI 326
            +  + +     + V 
Sbjct: 290 FWQLAISGSAILIAVA 305


>gi|50085079|ref|YP_046589.1| branched chain amino acid ABC transporter permease [Acinetobacter
           sp. ADP1]
 gi|49531055|emb|CAG68767.1| putative branched-chain amino acid permease protein (ABC
           superfamily, membrane) [Acinetobacter sp. ADP1]
          Length = 293

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 83/295 (28%), Gaps = 24/295 (8%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           +Y + A G  ++  + G+ +          A ++V L       I        +I     
Sbjct: 17  MYSLVAIGFVLIYRASGVFNFAQGALVLFSALTFVNLTEHGVPFIVAFAVTLFIIFIVVL 76

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +I  L         +    +    +   +    + +                   +   I
Sbjct: 77  LIDALVLKHLVNRSVITLFMATLGLSYVLEGTAQAVWG------------TQVHGLDLGI 124

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                    +    F     L    L   +     +T    + R + D+  A  S+   +
Sbjct: 125 SDVPIDFYGIHLSKFDLVATLIAGSLVIILSFLFTKTRFGISLRAVADDPLASQSVGIRL 184

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
            +  +  ++V+     +AG  + A               +  + ++I+GG TS++     
Sbjct: 185 NYIWILVWSVAGLVALVAGLLWGARLGVQFSLS---LVVLKALPVLIIGGFTSITGAIVG 241

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
             I+    +L          S ++              +   L +L+R   L   
Sbjct: 242 GLIIGASEKLAEIYLGSLIGSGIENWFP---------YLIAILFLLIRPTGLFGE 287


>gi|327446708|gb|EGE93362.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL043PA2]
          Length = 333

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 98/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +   I ++GIQ  +  + A+G++ V+ + G + L+     
Sbjct: 35  ALVGLIILCIALFIATPVFLTVPNIINIGIQAAVVAIMAFGMTFVIVTSG-IDLSVGSVA 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A     + S  GL  WL + +  +I    G + GL     +                
Sbjct: 94  ALSAMVSAWMFSNAGLPGWLTLIIGLLIGLLAGAVSGLAIAYGKLPAFI----------- 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  + I      +        +   ++ +    
Sbjct: 143 -----------ATLAMMSVARGLTLVISGGTPIATSDAVNQLGADVGPIPVPVIMLALAG 191

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N++A       +    ++ +A++  F G+AG   A    
Sbjct: 192 VVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALAGVFAGLAGLVLAGRLS 251

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLS-----KIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI G   S              +L  +      +N   F   
Sbjct: 252 SAQPQAGFGYELDAIAAVVIGGASLSGGSGKASGTFIGAFLLAVIRNGLNILNVSSFWQQ 311

Query: 310 LKFDCSFNMR 319
           +   C   + 
Sbjct: 312 VVIGCVIALA 321


>gi|258621576|ref|ZP_05716609.1| beta-methylgalactoside transporter inner membrane component [Vibrio
           mimicus VM573]
 gi|262165573|ref|ZP_06033310.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio mimicus VM223]
 gi|262171639|ref|ZP_06039317.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio mimicus MB-451]
 gi|258586194|gb|EEW10910.1| beta-methylgalactoside transporter inner membrane component [Vibrio
           mimicus VM573]
 gi|261892715|gb|EEY38701.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio mimicus MB-451]
 gi|262025289|gb|EEY43957.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio mimicus VM223]
          Length = 335

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/326 (9%), Positives = 95/326 (29%), Gaps = 13/326 (3%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F+++  K   I  +L ++  +++     +  S + + ++  Q  + V+ A G++ ++ + 
Sbjct: 7   FAIKHLKEGAIYAVLFILLAVIVIQ-EPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQ 65

Query: 64  GLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           G   L+      + A      +        ++  +    +++    + +    +      
Sbjct: 66  G-TDLSAGRQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGV 124

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           +     +   I     +      N      V            +             +  
Sbjct: 125 VVAYLKVTPFIATLGTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSY 184

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +Y ++ +      + +   +T        +  N +A       +    L  +A+S  F
Sbjct: 185 ITFYAIIAI----IFMWILWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVF 240

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
               G   A      + ++    E   + + V+      GG+ S++ +     I   +  
Sbjct: 241 YAFGGMLEAGRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINY 300

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               +    +   +            
Sbjct: 301 GMTYIGVSPYWQYIIKGSIIIFAVAL 326


>gi|256810448|ref|YP_003127817.1| inner-membrane translocator [Methanocaldococcus fervens AG86]
 gi|256793648|gb|ACV24317.1| inner-membrane translocator [Methanocaldococcus fervens AG86]
          Length = 304

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 94/283 (33%), Gaps = 15/283 (5%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
              +  + +        +G+Y  + +   + +S +L +PV  ++    G+I  L      
Sbjct: 23  TYITTNVPNFAQGSYAIVGSYVALTMLKLFDISPYLSLPVLFIVGAIVGLITYLALKPL- 81

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
                      S     I      +         ++ L  +  + ++   F     +   
Sbjct: 82  ------IKREASVEILMIATLAIDLVLLGIIGAYSEILSVIVGSTQAKFVFANLDFTIFG 135

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
            +  ++   L +  L   + + L +T    A R   +N     ++   +   +L ++ +S
Sbjct: 136 LKGILFVSTLVIVILLIGLYILLYKTKFGIALRASMENPSLAQTMGINVERTRLFSWILS 195

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
            A  G+AG      ++ +         +I   SIV  GG+  +S       I+     L 
Sbjct: 196 GALAGVAGGLLPFMQEIVPATGDLIIISIFAASIV--GGLRHISGALIGGYIIGISESLI 253

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                      L F   F +    + +I + + +L+  + +  
Sbjct: 254 TYYLS------LAFGTGFLVYGKVISLIMMIITLLVAPYGITG 290


>gi|253771597|ref|YP_003034428.1| inner-membrane translocator [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254163492|ref|YP_003046600.1| D-xylose transporter subunit [Escherichia coli B str. REL606]
 gi|297516538|ref|ZP_06934924.1| D-xylose transporter subunit [Escherichia coli OP50]
 gi|242379086|emb|CAQ33888.1| xylH, subunit of XylF/XylG/XylH xylose ABC transporter [Escherichia
           coli BL21(DE3)]
 gi|253322641|gb|ACT27243.1| inner-membrane translocator [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253975393|gb|ACT41064.1| D-xylose transporter subunit [Escherichia coli B str. REL606]
 gi|253979549|gb|ACT45219.1| D-xylose transporter subunit [Escherichia coli BL21(DE3)]
          Length = 393

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMETRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|319782757|ref|YP_004142233.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168645|gb|ADV12183.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 328

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 48/328 (14%), Positives = 93/328 (28%), Gaps = 24/328 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M  F  R +          V+      L+  +  S +Y+           + A G+ +V+
Sbjct: 13  MPRFIRRADPAVLTAFACIVLLLFFGSLYSRSFLSPEYLLQQLKVASFLGVIATGMMLVI 72

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
             LG + L+   A A GA       +   + + L IP   +     G++ G+     R  
Sbjct: 73  -LLGQIDLSVPWAVAAGAMMACAAAAYGPVGVALAIPFGIICGMLIGVVNGIGVAYLRIP 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
            +                     TN  A   +            +        + F I  
Sbjct: 132 SMI----------------ITLATNAVAQGLMVVYTGGFSPQDSATGAMRYLATGFAIPG 175

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +    ++  +   +   +L   RT        I + ++A +          + AFAVS  
Sbjct: 176 VPNAVIIWALIGAAMVFVL--TRTGFGRTVYGIGNRERAAYLSGIDTRRVVMIAFAVSGG 233

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVV 295
                G   A    + +  M        + ++V     ILGG  S         ++  + 
Sbjct: 234 LSAFGGVLLAGYASKAAQSMGDAYLLPSIAAVVLGGTSILGGRGSYLGTVAGVILITLLQ 293

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            +   M        + +           
Sbjct: 294 SILSVMQMPEAGRQIIYGVVIVAMLLLY 321


>gi|312134134|ref|YP_004001472.1| inner-membrane translocator [Caldicellulosiruptor owensensis OL]
 gi|311774185|gb|ADQ03672.1| inner-membrane translocator [Caldicellulosiruptor owensensis OL]
          Length = 373

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/359 (10%), Positives = 94/359 (26%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  + +++ +   L  G   + + +  +  Q+ I  + A G+  V+   G + L+
Sbjct: 8   RTYTLIIAILLIWTIFTILTDGNFLTPRNLSMLARQMAITALVAIGMVFVI-VAGHIDLS 66

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                        +L    G S    +    ++    G+  G            +    M
Sbjct: 67  VGSVVGFTGAIAGVLQVWNGWSTPTTVIAVLIVGILIGIWQGYWVAYRGVPAFIVTLAGM 126

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI-------- 181
                 +L+  K IT                    S++      + +++  I        
Sbjct: 127 LIFRGGVLLASKGITISPFKDSFRFIGQGYLNKAVSIVFGVVLIAGYLLLTINQRNRRKK 186

Query: 182 ---------------------------------FMYYVLLGMCFLSASIILWLRRTAISN 208
                                             +   +L +   +  +    + T    
Sbjct: 187 YNLEVLPMSLEVAKAAVVIALIAAFTGVMISYEGISIPVLILVIFTILLTFISQNTTFGK 246

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N++A       I    +  F +      +AG    +  D  +       E   
Sbjct: 247 YVYAIGGNKEAASLSGINIKSVTMKIFILMGFLSALAGIVLTSRLDAATSGAGTNMELDA 306

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + ++     LGG  ++        I+  +      +N  Y   L+            
Sbjct: 307 IAAAILGGTSTLGGEGTVPGAIIGALIMASIDNGMSLLNLEYSYQLIVKGLVLVFAVWL 365


>gi|297578911|ref|ZP_06940839.1| D-galactose/D-glucose ABC transporter [Vibrio cholerae RC385]
 gi|297536505|gb|EFH75338.1| D-galactose/D-glucose ABC transporter [Vibrio cholerae RC385]
          Length = 337

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/326 (9%), Positives = 95/326 (29%), Gaps = 13/326 (3%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F+++  K   I  +L ++  +++     +  S + + ++  Q  + V+ A G++ ++ + 
Sbjct: 9   FAIKYLKEGAIYAVLFILLAIIVIQ-EPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQ 67

Query: 64  GLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           G   L+      + A      +        ++  +    +++    + +    +      
Sbjct: 68  G-TDLSAGCQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGV 126

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           +     +   I     +      N      V            +             +  
Sbjct: 127 IVAYLKVTPFIATLGTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSY 186

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +Y ++ + F+         +T        +  N +A       +    L  +A+S  F
Sbjct: 187 ITFYAIIAIIFMWVL----WNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVF 242

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
               G   A      + ++    E   + + V+      GG+ S++ +     I   +  
Sbjct: 243 YAFGGMLEAGRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINY 302

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               +    +   +            
Sbjct: 303 GMTYIGVSPYWQYIIKGSIIIFAVAL 328


>gi|281357967|ref|ZP_06244452.1| inner-membrane translocator [Victivallis vadensis ATCC BAA-548]
 gi|281315625|gb|EFA99653.1| inner-membrane translocator [Victivallis vadensis ATCC BAA-548]
          Length = 321

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/316 (10%), Positives = 82/316 (25%), Gaps = 23/316 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +   V   +  +     ++ + + ++  Q+    + A G++ V+   G + L      
Sbjct: 18  VYIALAVLLAVCSVSNEYFRNPQNLANITRQVSYSGIIALGMTFVIA-AGGIDLAVGSLL 76

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+     ++       S  L + ++   +   G + G  +    G       ++      
Sbjct: 77  ALAGVLSILSMDLAPGSPALQLALAFATALGVGALGGAVNGVLVGAARIQPFIVTLGTMS 136

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                  +             + ++       +    L M  L+
Sbjct: 137 ----------------IYRSLALYFADAGLVSTGNELYRTATSATFCMISVPALVMVLLT 180

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + +R T        +  N++            K   + ++    G++         
Sbjct: 181 VFFTVVMRSTRFGRHVCAVGSNERVARYAAIPTGRIKFRTYLLAGLLAGLSAFLLGGRLS 240

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            IS      S  +  I+ VI+      GG  S+        +L  V  +           
Sbjct: 241 SISSSGAGLSYELDAIAAVIIGGTAMTGGRASVPGTLAGVLLLGIVSNVLDMWGISVNLQ 300

Query: 309 LLKFDCSFNMRHTTLM 324
                    +      
Sbjct: 301 GTVKGLVIIIAVLIQY 316


>gi|23009960|ref|ZP_00050817.1| COG4177: ABC-type branched-chain amino acid transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 157

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 2/115 (1%)

Query: 229 FAKLSAFAVSSAFIGMAGAFFA-ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
             KL AFA+SS   G++   +A A    + P  F    +  ++ IVI+GG+ +L      
Sbjct: 31  RTKLLAFALSSFVFGLSCVLWAFAYLRTVEPAGFNLDRSFQILFIVIIGGLGTLRGAFLG 90

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              ++ +  L   +             +  M    ++   +  V++     L  L
Sbjct: 91  AGFIVVLPLLLSRLGATLLGDGFDSG-TLEMVQRIVLGALIVAVLIREPAGLAAL 144


>gi|313765008|gb|EFS36372.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL013PA1]
 gi|313803553|gb|EFS44735.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL110PA2]
 gi|313814205|gb|EFS51919.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL025PA1]
 gi|313815435|gb|EFS53149.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL059PA1]
 gi|313829000|gb|EFS66714.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL063PA2]
 gi|314916230|gb|EFS80061.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL005PA4]
 gi|314917498|gb|EFS81329.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL050PA1]
 gi|314921834|gb|EFS85665.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL050PA3]
 gi|314930902|gb|EFS94733.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL067PA1]
 gi|314955303|gb|EFS99708.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL027PA1]
 gi|314964264|gb|EFT08364.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL082PA1]
 gi|314980240|gb|EFT24334.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL072PA2]
 gi|314987096|gb|EFT31188.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL005PA2]
 gi|314990703|gb|EFT34794.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL005PA3]
 gi|315088031|gb|EFT60007.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL072PA1]
 gi|315099326|gb|EFT71302.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL059PA2]
 gi|315102335|gb|EFT74311.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL046PA1]
 gi|315109849|gb|EFT81825.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL030PA2]
 gi|327333689|gb|EGE75406.1| ribose ABC transporter, permease protein [Propionibacterium acnes
           HL096PA3]
 gi|327444452|gb|EGE91106.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL013PA2]
 gi|327454268|gb|EGF00923.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL087PA3]
 gi|327457398|gb|EGF04053.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL092PA1]
 gi|328756026|gb|EGF69642.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL087PA1]
 gi|328757959|gb|EGF71575.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL020PA1]
 gi|328758870|gb|EGF72486.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL025PA2]
          Length = 333

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +   I ++GIQ  +  + A+G++ V+ + G + L+     
Sbjct: 35  ALVGLIILCIALFIATPVFLTVPNIINIGIQAAVVAIMAFGMTFVIVTSG-IDLSVGSVA 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A     + S  GL  WL + +  +I    G + GL     +                
Sbjct: 94  ALSAMVSAWMFSNAGLPGWLTLIIGLLIGLLAGAVSGLAIAYGKLPAFI----------- 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  + +      +        +   ++ +    
Sbjct: 143 -----------ATLAMMSVARGLTLVISGGTPVATSDAVNQLGADVGPIPVPVIMLALAG 191

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N++A       +    ++ +A++  F G+AG   A    
Sbjct: 192 VVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALAGVFAGLAGLVLAGRLS 251

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLS-----KIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI G   S              +L  +      +N   F   
Sbjct: 252 SAQPQAGFGYELDAIAAVVIGGASLSGGSGKASGTFIGAVLLAVIRNGLNILNVTSFWQQ 311

Query: 310 LKFDCSFNMR 319
           +   C   + 
Sbjct: 312 VVIGCVIALA 321


>gi|210610834|ref|ZP_03288609.1| hypothetical protein CLONEX_00799 [Clostridium nexile DSM 1787]
 gi|210152281|gb|EEA83288.1| hypothetical protein CLONEX_00799 [Clostridium nexile DSM 1787]
          Length = 366

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/321 (11%), Positives = 88/321 (27%), Gaps = 31/321 (9%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATK-------------SQKYIDSMGIQIL 47
           M  F+    K   I     V+  L   +   +                  Y+ ++     
Sbjct: 12  MDRFNGLFRKQIFIPIAALVILALFNLIVDPSFFKITLGHNAAGDPVLSGYLITILDYGS 71

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
              + A G+++V  + G   ++   A AI     + +          L     +      
Sbjct: 72  ELAILAIGMTLVTAASGGQDISVGAAIAISGSVVLRVLCGTNSRPDELQAPIIVAFLISC 131

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           ++  L              L+     Q ++      T G++     +       + ++  
Sbjct: 132 LVAMLFGA-------FNGVLVAHFKIQPMVATLILYTAGRSIAAWINNNELPIVSDKTFS 184

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
               F        I +  +          I L ++ T +    + +  N+ +        
Sbjct: 185 YIGGFIPG-----IPIPTLFFIAVLCMIIIALAMKFTNLKLYTQAVGINEFSSRLNGLNP 239

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT------SL 281
            F K  +F +    + + G    +    I+  +      +  I  V LGG        ++
Sbjct: 240 TFIKFLSFVILGVCVAVTGLIKVSRLSSINYSVIAKDIEMDAILAVALGGNALNGGKFNM 299

Query: 282 SKIAKATAILIGVVELCCGMN 302
           +       ++  +       N
Sbjct: 300 AASILGAYVIQFLTTTLYKFN 320


>gi|300871337|ref|YP_003786210.1| beta methylgalactoside transporter inner membrane protein
           [Brachyspira pilosicoli 95/1000]
 gi|300689038|gb|ADK31709.1| beta methylgalactoside transporter inner membrane component
           [Brachyspira pilosicoli 95/1000]
          Length = 340

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/269 (11%), Positives = 81/269 (30%), Gaps = 6/269 (2%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            +        ++  Q    ++ A G+  ++ + G   L    A  + A     L      
Sbjct: 36  PSFFRLSNFVNIFAQASTRMIIAVGIGTLLVTQGN-DLGAGRAVGLAAVVSASLLQSMSN 94

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              +   +  +      +++ +  + F      I + +    F   L     +    +  
Sbjct: 95  PTRMYPDLPLLPVIVPILLVMVILMIFGFINGFIISKLYVTPFIATLGMQLILYGVTSTY 154

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
           +                          I  + + Y+++    ++  + +   +T +    
Sbjct: 155 FDRPPYGAQPIGGLDPRFTNLAQGGIKIGGLTISYLIIFAVIITLIMWVIWNKTKLGKNI 214

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N +A       I    +  + ++ A  G+AG+   A     + ++    E   + 
Sbjct: 215 FAVGGNPEAAAVSGVNIPLTLMIVYTMAGALYGIAGSLEVARVGSATNNLGNGYELDAIA 274

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGV 294
           + V+      GG+ S+  I     I   +
Sbjct: 275 ACVVGGVSFSGGIGSILGIVSGVLIFQVI 303


>gi|262402326|ref|ZP_06078887.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio sp. RC586]
 gi|262351108|gb|EEZ00241.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio sp. RC586]
          Length = 335

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/326 (9%), Positives = 95/326 (29%), Gaps = 13/326 (3%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F+++  K   I  +L ++  +++     +  S + + ++  Q  + V+ A G++ ++ + 
Sbjct: 7   FAIKHLKEGAIYAVLFILLAVIVIQ-EPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQ 65

Query: 64  GLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           G   L+      + A      +        ++  +    +++    + +    +      
Sbjct: 66  G-TDLSAGRQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGV 124

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           +     +   I     +      N      V            +             +  
Sbjct: 125 IVAYLKVTPFIATLGTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSY 184

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +Y ++ +      + +   +T        +  N +A       +    L  +A+S  F
Sbjct: 185 ITFYAIIAI----IFMWILWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVF 240

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
               G   A      + ++    E   + + V+      GG+ S++ +     I   +  
Sbjct: 241 YAFGGMLEAGRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINY 300

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               +    +   +            
Sbjct: 301 GMTYIGVSPYWQYIIKGSIIIFAVAL 326


>gi|33596766|ref|NP_884409.1| amino acid ABC transporter [Bordetella parapertussis 12822]
 gi|33600535|ref|NP_888095.1| amino acid ABC transporter [Bordetella bronchiseptica RB50]
 gi|33568134|emb|CAE32047.1| Putative amino acid ABC transport system, membrane protein
           [Bordetella bronchiseptica RB50]
 gi|33573467|emb|CAE37453.1| Putative amino acid ABC transport system, membrane protein
           [Bordetella parapertussis]
          Length = 290

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 99/303 (32%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      IY + A GLS++ G L +++        +G ++     S  GL  W  I V
Sbjct: 9   IINGLAIGAIYALVAVGLSLIYGVLEIVNFAHGELVMLGGFAAFFAVSTLGLGYWPSILV 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++  A G+++    L           ++++     I+                  L  
Sbjct: 69  ATLLVAAAGLLLFDSVLFTLKSDDFQKGILLTLGLAMIIQNGALY-----------LLRA 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+ +   F  F    +   +               +  +L+ T    + R +  N++
Sbjct: 118 TPRTITTEYGFDAFQVGNLSIGVLRLIAFCLAIAAIVLLHAFLKWTRSGKSMRALAQNRE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +         + F + +A  G+AG   A         +          +I+I+GG+
Sbjct: 178 AALMVGMRPRTIARTVFVLGAALCGLAGGVLAPLYTV--HPLMGMPFVFKAFAIIIIGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++     A  I+     L  G         L F             I + L++L+R   
Sbjct: 236 GNIWGAIIAALIVGMTESLAGGFGSVVLQDALAF-------------IIMILILLVRPLG 282

Query: 339 LLR 341
           L  
Sbjct: 283 LFG 285


>gi|315425102|dbj|BAJ46774.1| branched-chain amino acid transport system permease protein
           [Candidatus Caldiarchaeum subterraneum]
          Length = 291

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 90/300 (30%), Gaps = 26/300 (8%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           +   +Y + A GL+++ G   L++        +  Y   +          L    +  + 
Sbjct: 18  MLGGVYALAAMGLALLFGVANLVNFAHGEYIMLAMYMAFVFSVTIFQDPVLTPMFNIPLF 77

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
            A G+I  L   K       ++ +  +     +L                          
Sbjct: 78  FAIGVITYLGIFKRLIKAPPLSQIAATVGILVLLRNLALAIWAAEPKAPPY--------- 128

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
              +    F    VI  +     +L        + L+L RT +  A R   D+ +A   +
Sbjct: 129 --TVFATSFNIGPVIVPLDKLLAMLVSLVTLLVLNLFLERTRLGVAMRASADDVEAVSLM 186

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
                   L    +S A +G++G+     +             ++  +IV L G+ ++  
Sbjct: 187 GVDTNRLFLLTAGISLALVGLSGSLIMTYQAV--TPTSGLLFGLLTWAIVALAGLGTVKG 244

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
           I  A+ I      L  G+                     ++     L++ +R   L   R
Sbjct: 245 ILIASIIFGLADSLASGLWDPRG-------------REIVLYGLFILILWIRPKGLFGRR 291


>gi|196041873|ref|ZP_03109161.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus NVH0597-99]
 gi|196027245|gb|EDX65864.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus NVH0597-99]
          Length = 284

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 102/305 (33%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  +  LI  
Sbjct: 6   FVNGISTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYVLALIGA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 66  IAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKVFWGPN 113

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L     F    VI   +  +V+L    +   ++L L++T I    R    +++
Sbjct: 114 PIGAKLPLWLQGSFTFGGVILIKYRLFVILIGIIIYVVLLLLLKKTKIGLMIRAGVIDKE 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 174 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++ + 
Sbjct: 233 GSVQGSAIASLIVGLAGAFTAYF--------------IPDLSLAINMLMLLFFLIVKPNG 278

Query: 339 LLRLR 343
           L+  +
Sbjct: 279 LVGEK 283


>gi|163736022|ref|ZP_02143447.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
 gi|161390689|gb|EDQ15033.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Roseobacter litoralis Och 149]
          Length = 329

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/331 (11%), Positives = 100/331 (30%), Gaps = 32/331 (9%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---------- 82
             + +   +  +  ++Y + A G  ++  + G+ +    +     A +            
Sbjct: 6   LWTAEVFLNGLMAGVLYALVALGFVLIYKASGIFNFAQGVMALFAAMTLYGIMNGQVPFA 65

Query: 83  ----------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
                     I    + +     I ++  +      ++     +F      I   + +  
Sbjct: 66  HLINAIFGTEIHYFGWNVPALAAIFLTMGVMVLFSWLVQRYIFRFLVGQEPIILFMATIG 125

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
               L     +  G     +   L          + F  F   F I  + +   ++    
Sbjct: 126 LAYFLEGVGDLMWGSDIKTLEVGLPQGINETIDAVTFEAFGYGFFIDNLDIVASIVAAIL 185

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               ++L+ + T    A R + D+ +A  S+  ++ F  +  ++++     +AG  + A 
Sbjct: 186 -VLGLVLFAQYTKQGRAMRAVADDHQAALSVGVSLNFIWILVWSLAGFVALVAGIMWGAK 244

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
                         +  + +++LGG TS+        I+    +L   +    +      
Sbjct: 245 SGVQFSLS---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFLIGQPYLGGATE 301

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
           +            +   + +L R   L   +
Sbjct: 302 NW--------FAYMLALVFLLFRPQGLFGEK 324


>gi|300783438|ref|YP_003763729.1| L-arabinose ABC transporter permease [Amycolatopsis mediterranei
           U32]
 gi|299792952|gb|ADJ43327.1| permease component of ABC-type L-arabinose transport system
           [Amycolatopsis mediterranei U32]
          Length = 341

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 85/314 (27%), Gaps = 26/314 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L +  +   +LL +          +  +G  I I  + A   ++V+  LG L ++     
Sbjct: 34  LIITLIALVILLSVLNENFFRTNNLLLIGSAITIMGLLALVQTLVI-ILGALDISVGSMA 92

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +    ++ +  G +   ++    +      +   +         +A   ++ +    
Sbjct: 93  GLASVISAMVFTSTGNAEVGILAAVGVGILCGLVNGMIIIFGRVNPVVATLAMLATYKGI 152

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +I          G                               + +  ++     ++
Sbjct: 153 AQVISNGKAQGYTGGD-------------------DLLIFLAKGTVLGLPSLVWVFLIVA 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A +   L+ T I      I  N  A       I    +  +A+      +AG    A   
Sbjct: 194 ALLHFLLKYTDIGRNVYAIGGNDTAARLAGININRYIIGVYALVGVVAAIAGVLITARTG 253

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              P        +  ++   L      GG  S+     A  IL  +     G+    F  
Sbjct: 254 SGQPTSGSEGLELQAVTGAALGGTMLKGGRGSIISTVLAVVILGVLDNGMSGLGINPFWQ 313

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 314 NVAHGALLVIAVVL 327


>gi|295109342|emb|CBL23295.1| Ribose/xylose/arabinose/galactoside ABC-type transport systems,
           permease components [Ruminococcus obeum A2-162]
          Length = 341

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/312 (8%), Positives = 81/312 (25%), Gaps = 13/312 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           ++  V   +++       +   + ++     +  +   G+ ++    G + L+     A+
Sbjct: 22  IIVFVAIFIVYALTTNGLTWSGMMNVFRHSAVIGIIGLGMGLIC-ITGEIDLSVGSMLAL 80

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                VI+ +     +         +                  ++ +   I++     I
Sbjct: 81  DGGFSVIIFNMTNSIVL------TFLFAVLFGAFCGLINGVMVGWIQMPAFIVTLATMLI 134

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
              +           +      +     S   +    +        +  V L +  ++  
Sbjct: 135 YRSFAQYFCQHVDKALIGGGSSVYKMANSQSSYQTLYNFGNGKVSTIPIVGLILIIMTLV 194

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +     T        +  N K            K+S F ++ A +G+    + A     
Sbjct: 195 FVYITTSTKYGKKVYAVGSNMKGAQMAGINTAAVKISVFVIAGALVGIGAFLWIAMNASA 254

Query: 257 SPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            P     S  +  I+  +LGG+           I         + ++   +      +  
Sbjct: 255 DPATTGNSYEMYAIAAAVLGGISMSGGKGKCLGILFGAMSYTIIDKIIVSLKMDSLINNA 314

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 315 IKGIILLIVIMV 326


>gi|157369273|ref|YP_001477262.1| monosaccharide-transporting ATPase [Serratia proteamaculans 568]
 gi|157321037|gb|ABV40134.1| Monosaccharide-transporting ATPase [Serratia proteamaculans 568]
          Length = 341

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 94/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +         +   + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 41  ILPILILIVAVFGFVAPNFFTDANLLNIARQASINIVLAAGMTFII-LTGGIDLSVGSML 99

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A     +       +  L    A+++G    +     + + G    I TL      +
Sbjct: 100 GTTAVVA--MAVSLMPGLAGLSIPLALLAGLGMGLFNGFLVAYAGLLPFIVTLGTYTALR 157

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                          +     F      Y   + ++++    + 
Sbjct: 158 GAAYLLAD-------------------GTTIINSDISFEWIGNSYLGPIPWLVIIAFAVI 198

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 199 ALCWFILRRTTLGVHIYAVGGNMQAARLTGIKVGAVLLFVYGMSGLLSGLGGIMSASRLY 258

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 259 SANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 318

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 319 VIKGAVIIIAVLI 331


>gi|320182086|gb|EFW56991.1| Xylose ABC transporter, permease protein XylH [Shigella boydii ATCC
           9905]
          Length = 393

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMDFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|315425580|dbj|BAJ47240.1| branched-chain amino acid ABC transporter permease [Candidatus
           Caldiarchaeum subterraneum]
          Length = 290

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 93/290 (32%), Gaps = 11/290 (3%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y+    +  L+  + A GL+++ G  G+L+L       +   +  +L    GL + L + 
Sbjct: 8   YLLDGVVFGLVLSLIAAGLTLIYGLAGVLNLAHGELLVVTTVTAAVLSGLLGLPLPLALI 67

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           V    + A  +++    L           +++          +                 
Sbjct: 68  VGIAATLAVAVVLDRVVLSPIYKLEGEERVLLGLYITLAFSIFLHSGIIT---------T 118

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
           F    +   +         + +        +    +   I L+L++T    A R++  N+
Sbjct: 119 FPLAYLTVNLPTPNIEVLGLSFRTAQLLAGVLSAVILLGIYLFLKKTWSGRAIRSLTQNE 178

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
                +  ++   ++  F V    +G+AG   +                I+ + + ++GG
Sbjct: 179 TGALLVGVSVKKYRMLVFMVGGVLVGLAGIVRSIIATVAPES--GLEFTILGLLVTVVGG 236

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           + S+S    A  ++  V      +   Y   +        +  T    I 
Sbjct: 237 IRSVSGTIAAGLVIGVVYTFLVVVVGTYLAYVALLILIMVLLLTRPYGIL 286


>gi|86139337|ref|ZP_01057906.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85823840|gb|EAQ44046.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 331

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/334 (11%), Positives = 103/334 (30%), Gaps = 34/334 (10%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--------- 82
              + +   +  +  ++Y + A G  ++  + G+ +    +     A + V         
Sbjct: 5   FLFATEVFFNGLMAGVLYALVALGFVLIYKASGIFNYAQGVMALFAAMTLVGIMQGQVPF 64

Query: 83  -----------ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                      +    + +   L I ++  +      ++    ++       I   + + 
Sbjct: 65  SHIINAVFGTEVHHFGWHVPALLAILLTVGVMVIFAWLVQRIVMRHLVGQEPIILFMATI 124

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL--LG 189
                L  +  +  G     +   L   G+     +       +F  + I    ++  + 
Sbjct: 125 GLAYFLEGFSDLMWGSEIKKLDVGLPQGGSFWIEDMTAGLGSDNFYGFFIDQLDIVATVI 184

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              L   ++L+ + T    A R + D+ +A  S+  ++ F  +  ++V+     +AG  +
Sbjct: 185 AALLVIGLVLFAQYTKQGRAMRAVADDHQAALSVGISLNFIWVLVWSVAGFVALVAGIVW 244

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                            +  + +++LGG TS+        I+    +L            
Sbjct: 245 GTKSGVQFSLS---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFAIGPMVGGA 301

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            +   +          +   L ++ R   L   +
Sbjct: 302 TENWFA---------YVLALLFLVFRPQGLFGEK 326


>gi|239625720|ref|ZP_04668751.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239519950|gb|EEQ59816.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47FAA]
          Length = 343

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/350 (11%), Positives = 98/350 (28%), Gaps = 27/350 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R  +         ++  +          S + + ++   +  Y++   G S V+   G 
Sbjct: 15  IRGMRGALTAFAGLIIIYIAFGAINPTVFSGQNVTNLFRSMSKYLIIGIGQSYVL-ITGN 73

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+      + A     L +     +      +A++      +              + 
Sbjct: 74  IDLSIGSVVGMSAMISATLMTHGVNPM------AAILITLICCLAIGVINGILVGKFQLP 127

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
             I +     +      + NG                 +    F+   ++ V    ++  
Sbjct: 128 PFIATLGTMFVARGVAYMVNGNRNTDAISSGIGKEAADKFQAFFYYGKTAGVFNTFWIAL 187

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           VL        +    L +T        I  N +A      +++      + VS+    + 
Sbjct: 188 VLF------IAFFFLLSKTRTGRHIYAIGSNVEAAKLSGVSVVATVTKTYLVSAFCSFVV 241

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G       +  + +     E   V + VI     LGG   L       A+   +      
Sbjct: 242 GLILCGQANMGNMEAGNMYEMYAVAAGVIGGISPLGGTGILLGTFAGAAVWQTLENGL-- 299

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLE 350
                  +++            ++V+   L+ ++    +L  + P    +
Sbjct: 300 -------NMIGVQVGIQRLVIGIIVVFAVLLDVVLRKGMLIRKRPMAEKK 342


>gi|308188733|ref|YP_003932864.1| Xylose transport system permease protein xylH [Pantoea vagans C9-1]
 gi|308059243|gb|ADO11415.1| Xylose transport system permease protein xylH [Pantoea vagans C9-1]
          Length = 394

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 47/366 (12%), Positives = 101/366 (27%), Gaps = 47/366 (12%)

Query: 3   IFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS 62
            F+L   +   +L  + ++     +   GA  S + + ++  Q  I  + A G+  V+ S
Sbjct: 22  RFTLPNLQVLVMLGAIVLIALFFTWTTDGAWLSARNVSNLLRQTAITGILAVGMVFVIIS 81

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
              + L+      +   +  I     G  + L I V+ ++    G   G      +    
Sbjct: 82  A-EIDLSVGSMMGLLGGAAAIFDVWLGWPLPLTIVVTLVMGLLLGTWNGWWVAYRKVPSF 140

Query: 123 AIATLIMSEIFQNIL--------------------IKWKPITNGKAGIYVADRLYFLGTT 162
            +    M      ++                               G+            
Sbjct: 141 IVTLAGMLAFRGILVGITDGTTVAPITPGMSQIGQSYLPGGVGFGFGVAGLALFMLWQWR 200

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI---------------------ILWL 201
           +R   +    P       +    +   +   +  +                     +   
Sbjct: 201 LRLRRQQLGLPQGAASSTVGRQAITAILVLGAIWLLNDYRGVPTPVLLLAVLLLAGMFMA 260

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            RTA       I  N  A       +   KL+ FA++   + +AG   ++     SP   
Sbjct: 261 TRTAFGRRIYAIGGNIDAARLSGINVARTKLAVFAINGVMVAIAGLILSSRLGAGSPSAG 320

Query: 262 KFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
             +E   + + VI      GG+ S++       I+  +      M+   F   +      
Sbjct: 321 NIAELDAIAACVIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAIL 380

Query: 317 NMRHTT 322
            +    
Sbjct: 381 LLAVWM 386


>gi|302868553|ref|YP_003837190.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029]
 gi|302571412|gb|ADL47614.1| inner-membrane translocator [Micromonospora aurantiaca ATCC 27029]
          Length = 332

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 96/304 (31%), Gaps = 17/304 (5%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            +R +++     L       L            Y+ S+    L+  + A    ++ G  G
Sbjct: 17  PIRRSRFGPAWLLPTAAAGALAAAVGLPWLVNAYLISLAATALVMAVLAMSTQLLAGLAG 76

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           L  L       +GAY+   + +   L    L+  +A  + A  +   L        +L +
Sbjct: 77  LAPLGQAAYLTVGAYTAASVAALTSLGPVQLLAAAAAGAIAAAVTGLLAVRARGTTFLMV 136

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
                           +    G  G++    +                    ++   ++Y
Sbjct: 137 T---FGLGELVHAAANQWAPGGSEGVHAPPVVALP-------------GLPSMVQPGWVY 180

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             +L    L    +    R+  +   R I  ++    +         L+A+ ++    G 
Sbjct: 181 LYVLACTLLIGVAVAVAVRSRFALLLRGIAAHEPRVQATGHHTGGLLLTAYVLAGGIAGA 240

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AGA   A    +SP       + + ++  ++ G  S++    A  +L+   +   G+   
Sbjct: 241 AGALLIAVTRYVSPADAAMGVSALALAAALI-GSGSMTGACAAAVLLVAARDWAGGLLGG 299

Query: 305 YFNS 308
           +  +
Sbjct: 300 HGPT 303


>gi|254302987|ref|ZP_04970345.1| galactoside ABC superfamily ATP binding cassette transporter
           membrane protein [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323179|gb|EDK88429.1| galactoside ABC superfamily ATP binding cassette transporter
           membrane protein [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 339

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/310 (10%), Positives = 87/310 (28%), Gaps = 8/310 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+     + + +      S +   ++  Q  +  + A G++ ++ + G   L+     
Sbjct: 21  LYLVLFCMLIAIIIKEPTFLSIRNFKNILTQSSVRTIIALGVAGLIVTQG-TDLSAGRQV 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     L             +         +I+ +  +        +   +    F 
Sbjct: 80  GLSAVISGTLLQSMTNVNKAFPTLGEFSIFTTILIVVVVGIVIASINGIVVATLNVHPFI 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +     +    +  Y       +   V    +F +       Y I    +   +  L 
Sbjct: 140 ATMGTMTIVYGINSLYYDKAGAAPISGFVEKYSKFAQGYIQIGSYTIPYLIIYAAIATLI 199

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             ++    +T        +  N +A       ++   +  +A+S A+    G   A    
Sbjct: 200 MWVLWN--KTKFGKNVFAVGGNPEAAKVSGVNVVLTLIGIYALSGAYYAFGGFLEAGRIG 257

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + + VI      GG+  +S +     IL  +           +   
Sbjct: 258 SATNNLGFMYEMDAIAACVIGGVSFYGGVGRISGVITGVIILTIINYGLTYTGVSPYWQY 317

Query: 310 LKFDCSFNMR 319
           +         
Sbjct: 318 IIKGIIIVTA 327


>gi|125974090|ref|YP_001038000.1| inner-membrane translocator [Clostridium thermocellum ATCC 27405]
 gi|256004434|ref|ZP_05429414.1| inner-membrane translocator [Clostridium thermocellum DSM 2360]
 gi|281418235|ref|ZP_06249255.1| inner-membrane translocator [Clostridium thermocellum JW20]
 gi|125714315|gb|ABN52807.1| nucleoside ABC transporter membrane protein / laminaribiose ABC
           transporter membrane protein [Clostridium thermocellum
           ATCC 27405]
 gi|255991575|gb|EEU01677.1| inner-membrane translocator [Clostridium thermocellum DSM 2360]
 gi|281409637|gb|EFB39895.1| inner-membrane translocator [Clostridium thermocellum JW20]
 gi|316941335|gb|ADU75369.1| inner-membrane translocator [Clostridium thermocellum DSM 1313]
          Length = 311

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 79/267 (29%), Gaps = 7/267 (2%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G++++       IGA+      + +  + WL      ++    G+I  +  + F  D  
Sbjct: 35  SGVVNIGIEGMMTIGAFVGA-AVAHFTGNAWLAFLCGGLVGALFGLIHAIACVSFGADQT 93

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
              T I        +   K +    +     D    L      +     F ++ +   + 
Sbjct: 94  ISGTAINFLAPGVAIFVCKALFEQSSNTPPLDTAQKLPKLFNGVFEVGSFWNNVLNTYVA 153

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y   + +    A +     +T      R + ++ KA  +    +   +  A   S  F 
Sbjct: 154 TYLAFVAV----AIVWFIFYKTRFGMRLRAVGEHPKACETQGINVFRIRYIAVIASGFFA 209

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+ GA+                +  I I+ VI G  T     A    +L G+      + 
Sbjct: 210 GLGGAYVTLCTVSQFRPEVIVGQGFIAIAAVIFGKFT--PHGAMGACLLFGLCNGLKVLL 267

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALF 329
                             T + ++   
Sbjct: 268 GSGNVISPNLISMIPYVVTIITLVLFV 294


>gi|315107482|gb|EFT79458.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL030PA1]
          Length = 333

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +   I ++GIQ  +  + A+G++ V+ + G + L+     
Sbjct: 35  ALVGLIILCIALFIATPVFLTVPNIINIGIQAAVVAIMAFGMTFVIVTSG-IDLSVGSVA 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A     + S  GL  WL + +  +I    G + GL     +                
Sbjct: 94  ALSAMVSAWMFSNAGLPSWLTLIIGLLIGLLAGAVSGLAIAYGKLPAFI----------- 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  + +      +        +   ++ +    
Sbjct: 143 -----------ATLAMMSVARGLTLVISGGTPVATSDAVNQLGADVGPIPVPVIMLALAG 191

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N++A       +    ++ +A++  F G+AG   A    
Sbjct: 192 VVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALAGVFAGLAGLVLAGRLS 251

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLS-----KIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI G   S              +L  +      +N   F   
Sbjct: 252 SAQPQAGFGYELDAIAAVVIGGASLSGGSGKASGTFIGAVLLAVIRNGLNILNVSSFWQQ 311

Query: 310 LKFDCSFNMR 319
           +   C   + 
Sbjct: 312 VVIGCVIALA 321


>gi|291301097|ref|YP_003512375.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728]
 gi|290570317|gb|ADD43282.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728]
          Length = 334

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 43/313 (13%), Positives = 95/313 (30%), Gaps = 27/313 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +  V+  +          +   +  +  Q+++    A G ++++   G + L+     A 
Sbjct: 33  VALVLATVFFATQSATFLTGPSLSLILQQVMVVGTLAIGQTLIILVAG-IDLSVGTIMAF 91

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA--TLIMSEIFQ 134
           G+     L    GL   + +          G++ GL   + +     +    L ++    
Sbjct: 92  GSIVMAKLAVDSGLPWPVAVGAGIATCTVFGLVNGLLVTRIKLPPFIVTLGMLNIAYALT 151

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           ++    + +TN  AG+                        +F I +  + Y  + M  L 
Sbjct: 152 HMYSAEETVTNLPAGMT-------------------ALGETFAIGDTRVTYGSVLMLVLF 192

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   L  TA       +  N +        +   +L+AF  + A  G+A     A   
Sbjct: 193 GVVAYILGGTAWGQRLYAVGSNAEGTRLTGIPVDRVRLAAFTAAGAIYGIAALLLIARTG 252

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P +        + ++V     + GG  ++        I+         M       +
Sbjct: 253 VGDPKVGLTENLESITAVVLGGTSLFGGRGAVLGTLVGVLIVGVFRSGLQQMGVGATPQI 312

Query: 310 LKFDCSFNMRHTT 322
           L       +  T 
Sbjct: 313 LVTGILVILAVTV 325


>gi|213970651|ref|ZP_03398777.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
 gi|301382034|ref|ZP_07230452.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato Max13]
 gi|302060940|ref|ZP_07252481.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato K40]
 gi|302133929|ref|ZP_07259919.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213924648|gb|EEB58217.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. tomato T1]
          Length = 293

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 90/305 (29%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A ++V L  R     W  +  
Sbjct: 8   LIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGAMVLFAALTFVSLLERGVPFFWAFLAT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A +     +I  L           I  +    +   I    + +               
Sbjct: 68  LASMVVLALLIERLVLRPLVNRPPIILFMATLGLSYMIEGLAQALWGA------------ 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F  +       L  ++ +   RT I  + R + D+  
Sbjct: 116 QVHGLELGIPDEPLEIRGMLLSQFDLFAAGTAAALVIALSVLFNRTRIGLSLRAVADDPL 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +       +AV+     +AG  + A               +  + ++I+GG 
Sbjct: 176 ASLAVGIRLPRIWAVVWAVAGFVGLVAGLLWGARLGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S+        I+    +L          S ++              +   L +L+R   
Sbjct: 233 SSIGGAIVGGLIIGASEKLAEIYLGPIIGSGIENWVP---------YVLALLFLLVRPAG 283

Query: 339 LLRLR 343
           L   R
Sbjct: 284 LFGER 288


>gi|297585389|ref|YP_003701169.1| inner-membrane translocator [Bacillus selenitireducens MLS10]
 gi|297143846|gb|ADI00604.1| inner-membrane translocator [Bacillus selenitireducens MLS10]
          Length = 329

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 43/320 (13%), Positives = 91/320 (28%), Gaps = 18/320 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y     +L VV  +   L      S   I ++   I I  + A G++I +   G   L+ 
Sbjct: 20  YRYGTLILIVVLIIFFTLMNPNFLSTGNIINILRSISIVTIIAVGITISLSVNG-FDLSV 78

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               ++     + +   Y     + I    + + A G       +K R   L +      
Sbjct: 79  GSVASLANAVVISMFVWYQQPTMIAIAAGILAALAVGAFNAFMIVKVRIPDLLMT----- 133

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                  +    I  G A  Y           +           +       + ++++ M
Sbjct: 134 -------LATMFIIQGVALTYTRGATVSQNMIMPDGTFAEGQIPALFAALGRVPWIIIIM 186

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 + ++L  T        I  NQ+A       +   K+ A+ +S+ F  + G   A
Sbjct: 187 AITVLVVHIFLTYTKHGRYMYVIGGNQEAARLSGIPVNKYKVIAYLLSATFAAIGGMILA 246

Query: 251 ASRDRISPDMFKFSENIIVIS-----IVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           +       +         V +      V+  G  +         ++  +      M+  Y
Sbjct: 247 SRIMTAEINAGGPYLMDAVAAAFIGFAVLGAGKPNAFGTFIGAVLIGILANGLVMMSVPY 306

Query: 306 FNSLLKFDCSFNMRHTTLMV 325
           +   +       +       
Sbjct: 307 YAMDIVKGTILALALALTYY 326


>gi|159186115|ref|NP_356332.2| ABC transporter, membrane spanning protein (ribose) [Agrobacterium
           tumefaciens str. C58]
 gi|159141249|gb|AAK89117.2| ABC transporter, membrane spanning protein (ribose) [Agrobacterium
           tumefaciens str. C58]
          Length = 325

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 47/325 (14%), Positives = 91/325 (28%), Gaps = 28/325 (8%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           FS  L     +     +V  +L+ L      S   I ++  Q+ +  + A G++ V+   
Sbjct: 18  FSAMLRSPLALPLAGLIVVSILMGLASDNFFSVNNIMNVLRQVSVVGILAVGMTFVI-LT 76

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+     A+       L    GLS  + +P    I    G+  G      R     
Sbjct: 77  GGIDLSVGAVMALVGTLSAGLMVNTGLSPAIALPAGLFIGLGIGIFNGALVAWGRMPA-- 134

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
              +I++     +      I +G   +                          V     +
Sbjct: 135 ---IIVTLATMGMARGLGLIYSGGYPVSGIP---------------SWISWFGVGRVGIV 176

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
              ++ M  + A   + L+RTA       +  N+ A           KL+ + +S     
Sbjct: 177 PVPVIIMVVIYAVAWVLLQRTAFGRHVYALGGNELAARLSGVKTRRVKLAVYGISGVTAA 236

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVEL 297
            A                     +  I+ V+L      GG   +        +L  +   
Sbjct: 237 FAALILTGRLMS-GQPNAGVGFELDAIAAVVLGGTAIAGGRGLILGTLIGAVLLGILNNG 295

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTT 322
              M    +   +       +    
Sbjct: 296 LNLMGINPYLQDVIKGGIILLAIYI 320


>gi|85704378|ref|ZP_01035480.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. 217]
 gi|85670786|gb|EAQ25645.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. 217]
          Length = 328

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/325 (11%), Positives = 99/325 (30%), Gaps = 33/325 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---------------- 82
           + +  +  ++Y + A G  ++  + G+ +    +     A + V                
Sbjct: 12  VLNGLMAGVLYALVALGFVLIYKASGIFNYAQGVMALFAAMTLVGMMEGRVPFSHLINAI 71

Query: 83  ----ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               I    + L   L I ++ +I      I+     +   +   I   + +      L 
Sbjct: 72  FGTEIHHFGWHLPGLLAILLTMVIMVVLAWIVNQLIFRHLVNQEPIILFMATIGLAYFLE 131

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
            +  +  G     +   L            F      F I  + +    +    +  +++
Sbjct: 132 GFGDMMWGSDIKKLDVGLPQGINDWIDATTFEIMGYGFFIDNLDIVATGVAALLV-IALV 190

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
            + + +    A R + D+ +A  S+  ++ F  +  ++++     +AG  +         
Sbjct: 191 AFAQYSKQGRAMRAVADDHQAALSVGISLNFIWVMVWSLAGFVALVAGIMWGTKSGVQFS 250

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                   +  + +++LGG TS+        I+    +L             +   +   
Sbjct: 251 LS---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFAIGPMVGGATENWFA--- 304

Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343
                  +   + ++ R   L   +
Sbjct: 305 ------YVLALIFLVFRPQGLFGEK 323


>gi|329936352|ref|ZP_08286117.1| ABC transporter membrane protein [Streptomyces griseoaurantiacus
           M045]
 gi|329304148|gb|EGG48029.1| ABC transporter membrane protein [Streptomyces griseoaurantiacus
           M045]
          Length = 359

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 41/320 (12%), Positives = 95/320 (29%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +  + L AV   +   +     +    + ++  Q     + A  +++++   G   
Sbjct: 37  LARPEVGVFLGAVAVFVFFLVEAPTVRQGSSMATVLYQASTIGIMALPVALLM-IGGEFD 95

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A    A +  ++  +  +++W+ + V+ ++S A G   G   +   G    + TL
Sbjct: 96  LSAGVAVISSALTAAMISFQLTMNVWVGVLVALVLSLAVGAFNGW-MMVRTGLPSFLVTL 154

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                 Q + +    +  G         +             F      V   +  + V 
Sbjct: 155 GTFLGLQGVNLAVTKLVTGNVATDDISDMDGFDQAKSVFSSSFHLGDVQVKITVVWWLVF 214

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +            RT   N    +  N+ +  ++   + F K+S F +        G 
Sbjct: 215 AALATWVLL------RTKYGNWIFAVGGNKDSARAVGVPVTFTKISLFMLVGFGAWFVGM 268

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
               + + +        E I + + VI      GG  S         +   V +      
Sbjct: 269 HQLFAFNTVQSGEGVGQELIYIAAAVIGGCLLTGGYGSAIGPVFGAFMFGMVSQGIVFAG 328

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
           +                   
Sbjct: 329 WNPDWFKAFLGVMLLGATLI 348


>gi|313792552|gb|EFS40638.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL110PA1]
 gi|314969065|gb|EFT13163.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL037PA1]
 gi|315083097|gb|EFT55073.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL027PA2]
          Length = 333

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +   I ++GIQ  +  + A+G++ V+ + G + L+     
Sbjct: 35  ALVGLIILCIALFIATPVFLTVPNIINIGIQAAVVAIMAFGMTFVIVTSG-IDLSVGSVA 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A     + S  GL  WL + +  +I    G + GL     +                
Sbjct: 94  ALSAMVSAWMFSNAGLPGWLTLIIGLLIGLLAGAVSGLAIAYGKLPAFI----------- 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  + +      +        +   ++ +    
Sbjct: 143 -----------ATLAMMSVARGLTLVISGGTPVATSDAVNQLGADVGPIPVPVIMLALAG 191

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N++A       +    ++ +A++  F G+AG   A    
Sbjct: 192 VVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALAGVFAGLAGLVLAGRLS 251

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLS-----KIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI G   S              +L  +      +N   F   
Sbjct: 252 SAQPQAGFGYELDAIAAVVIGGASLSGGSGKASGTFIGAFLLAVIRNGLNILNVTSFWQQ 311

Query: 310 LKFDCSFNMR 319
           +   C   + 
Sbjct: 312 VVIGCVIALA 321


>gi|296135386|ref|YP_003642628.1| inner-membrane translocator [Thiomonas intermedia K12]
 gi|295795508|gb|ADG30298.1| inner-membrane translocator [Thiomonas intermedia K12]
          Length = 414

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 92/284 (32%), Gaps = 32/284 (11%)

Query: 63  LGLLSLNCVIAYAIGAYSYV-----ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
            GLLS    +   + AY+       I  S + L   L+     M + A  ++ G  S++ 
Sbjct: 56  AGLLSFGQAMYAGLAAYAAAHAMNTIAASGWPLPFALVPLYGGMFAVAVALVFGPISVRR 115

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
            G   A+ TL +  +        +    G+ G+                     +    +
Sbjct: 116 GGLSFAMITLGLGLLVALAAPMLQGFFGGEGGVS------------TDRTAGTVWLGLDL 163

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           + +  +Y V      L A+++  L  T +    R +RDN         T    +L    V
Sbjct: 164 LSQRQVYGVSAAYVLLGAALLRGLDGTRLDLLARAVRDNPLRVAVSGATPRRVRLQLVLV 223

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           S+   G++GA      +++S       ++ + +   +  G  +         +++G   +
Sbjct: 224 SAFLAGLSGALQTLRLEQVSAGSLGLQQSSMALLFSLAAGSGTAWGALLGAGLMVGSESV 283

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              ++  +                  + +    +++     L  
Sbjct: 284 LASVSQAW---------------MLYVSLGFLAIVIWAPQGLSG 312


>gi|261405100|ref|YP_003241341.1| inner-membrane translocator [Paenibacillus sp. Y412MC10]
 gi|261281563|gb|ACX63534.1| inner-membrane translocator [Paenibacillus sp. Y412MC10]
          Length = 331

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/315 (12%), Positives = 91/315 (28%), Gaps = 18/315 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   V  L+         +   I ++   I I  + A GL++ +   G   L+     +
Sbjct: 26  LITVFVLILVFGTVADNFLNTSNIINILRSISIVTIIAVGLTVSLAVGG-FDLSVGSTAS 84

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +     + +   +G +I + I ++ +   A G+I                 +        
Sbjct: 85  LANALVISMFVWHGQNIGIGIGLTLLFCLAVGLINAFLV------------INFKIDDML 132

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +    I  G A  Y           + S         +       + ++++ M  +  
Sbjct: 133 MTLATMFIFQGVALTYTRGATISQNMIMPSGDFATGKIPALFEKIGQVPWIIIIMVLVVL 192

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + L+L  T        I  N++A       +   +L A+ VS+ F  + G    A    
Sbjct: 193 VVHLFLTYTKHGRYMYMIGGNREAAALSGIPVSKYRLIAYLVSALFAAIGGIILGARVMT 252

Query: 256 ISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
              +         V +      V   G  +         ++  +      ++  Y+   +
Sbjct: 253 AEVNSGGPYLMDAVAATFIGYSVFGAGKPNALGTFVGAVLIGILQNGLIMLSVPYYAMDI 312

Query: 311 KFDCSFNMRHTTLMV 325
                  +       
Sbjct: 313 VKGSVLALALALTYY 327


>gi|15641340|ref|NP_230972.1| beta-methylgalactoside transporter inner membrane component [Vibrio
           cholerae O1 biovar El Tor str. N16961]
 gi|121586559|ref|ZP_01676345.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae 2740-80]
 gi|121726830|ref|ZP_01680042.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae V52]
 gi|147675406|ref|YP_001216891.1| beta-methylgalactoside transporter inner membrane component [Vibrio
           cholerae O395]
 gi|153213485|ref|ZP_01948796.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae 1587]
 gi|153802273|ref|ZP_01956859.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae MZO-3]
 gi|153818363|ref|ZP_01971030.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae NCTC 8457]
 gi|153822087|ref|ZP_01974754.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae B33]
 gi|153830679|ref|ZP_01983346.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae 623-39]
 gi|227081499|ref|YP_002810050.1| galactoside ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|229505088|ref|ZP_04394598.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae BX 330286]
 gi|229511242|ref|ZP_04400721.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae B33]
 gi|229515702|ref|ZP_04405161.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae TMA 21]
 gi|229518360|ref|ZP_04407804.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae RC9]
 gi|229521438|ref|ZP_04410857.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae TM 11079-80]
 gi|229525917|ref|ZP_04415322.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae bv. albensis VL426]
 gi|229529592|ref|ZP_04418982.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae 12129(1)]
 gi|229608092|ref|YP_002878740.1| beta-methylgalactoside transporter inner membrane component [Vibrio
           cholerae MJ-1236]
 gi|254225373|ref|ZP_04918985.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae V51]
 gi|254848449|ref|ZP_05237799.1| D-galactose/D-glucose ABC transporter [Vibrio cholerae MO10]
 gi|298498584|ref|ZP_07008391.1| galactoside ABC transporter [Vibrio cholerae MAK 757]
 gi|9655818|gb|AAF94486.1| galactoside ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121549238|gb|EAX59270.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae 2740-80]
 gi|121630734|gb|EAX63119.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae V52]
 gi|124115949|gb|EAY34769.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae 1587]
 gi|124122209|gb|EAY40952.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae MZO-3]
 gi|125622214|gb|EAZ50536.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae V51]
 gi|126511110|gb|EAZ73704.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae NCTC 8457]
 gi|126520420|gb|EAZ77643.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae B33]
 gi|146317289|gb|ABQ21828.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae O395]
 gi|148873830|gb|EDL71965.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae 623-39]
 gi|227009387|gb|ACP05599.1| galactoside ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|227013245|gb|ACP09455.1| galactoside ABC transporter, permease protein [Vibrio cholerae
           O395]
 gi|229333366|gb|EEN98852.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae 12129(1)]
 gi|229339498|gb|EEO04515.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae bv. albensis VL426]
 gi|229341536|gb|EEO06539.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae TM 11079-80]
 gi|229345075|gb|EEO10049.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae RC9]
 gi|229347471|gb|EEO12431.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae TMA 21]
 gi|229351207|gb|EEO16148.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae B33]
 gi|229357311|gb|EEO22228.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae BX 330286]
 gi|229370747|gb|ACQ61170.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae MJ-1236]
 gi|254844154|gb|EET22568.1| D-galactose/D-glucose ABC transporter [Vibrio cholerae MO10]
 gi|297542917|gb|EFH78967.1| galactoside ABC transporter [Vibrio cholerae MAK 757]
          Length = 337

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/326 (9%), Positives = 95/326 (29%), Gaps = 13/326 (3%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F+++  K   I  +L ++  +++     +  S + + ++  Q  + V+ A G++ ++ + 
Sbjct: 9   FAIKHLKEGAIYAVLFILLAIIVIQ-EPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQ 67

Query: 64  GLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           G   L+      + A      +        ++  +    +++    + +    +      
Sbjct: 68  G-TDLSAGRQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGV 126

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           +     +   I     +      N      V            +             +  
Sbjct: 127 IVAYLKVTPFIATLGTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSY 186

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +Y ++ + F+         +T        +  N +A       +    L  +A+S  F
Sbjct: 187 ITFYAIIAIIFMWVL----WNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVF 242

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
               G   A      + ++    E   + + V+      GG+ S++ +     I   +  
Sbjct: 243 YAFGGMLEAGRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINY 302

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               +    +   +            
Sbjct: 303 GMTYIGVSPYWQYIIKGSIIIFAVAL 328


>gi|22126375|ref|NP_669798.1| ABC transporter permease [Yersinia pestis KIM 10]
 gi|45441396|ref|NP_992935.1| putative permease of ABC transporter [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108807186|ref|YP_651102.1| putative sugar ABC transporter permease [Yersinia pestis Antiqua]
 gi|108812470|ref|YP_648237.1| sugar ABC transporter, permease [Yersinia pestis Nepal516]
 gi|145598597|ref|YP_001162673.1| sugar ABC transporter, permease [Yersinia pestis Pestoides F]
 gi|166210780|ref|ZP_02236815.1| carbohydrate uptake ABC transporter 2 (CUT2) family, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167467504|ref|ZP_02332208.1| sugar ABC transporter, permease [Yersinia pestis FV-1]
 gi|229896259|ref|ZP_04511429.1| putative sugar ABC transporter, permease [Yersinia pestis Pestoides
           A]
 gi|229897196|ref|ZP_04512352.1| putative sugar ABC transporter, permease [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229897923|ref|ZP_04513074.1| putative sugar ABC transporter, permease [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902846|ref|ZP_04517963.1| putative sugar ABC transporter, permease [Yersinia pestis Nepal516]
 gi|270486632|ref|ZP_06203706.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
 gi|294504017|ref|YP_003568079.1| permease of ABC transporter [Yersinia pestis Z176003]
 gi|21959360|gb|AAM86049.1|AE013852_11 putative permease of ABC transporter [Yersinia pestis KIM 10]
 gi|45436256|gb|AAS61812.1| putative permease of ABC transporter [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108776118|gb|ABG18637.1| sugar ABC transporter, permease [Yersinia pestis Nepal516]
 gi|108779099|gb|ABG13157.1| putative sugar ABC transporter, permease [Yersinia pestis Antiqua]
 gi|145210293|gb|ABP39700.1| sugar ABC transporter, permease [Yersinia pestis Pestoides F]
 gi|166207960|gb|EDR52440.1| carbohydrate uptake ABC transporter 2 (CUT2) family, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|229680293|gb|EEO76392.1| putative sugar ABC transporter, permease [Yersinia pestis Nepal516]
 gi|229688964|gb|EEO81029.1| putative sugar ABC transporter, permease [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229693533|gb|EEO83582.1| putative sugar ABC transporter, permease [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701182|gb|EEO89211.1| putative sugar ABC transporter, permease [Yersinia pestis Pestoides
           A]
 gi|262366067|gb|ACY62624.1| permease of ABC transporter [Yersinia pestis D182038]
 gi|270335136|gb|EFA45913.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
 gi|294354476|gb|ADE64817.1| permease of ABC transporter [Yersinia pestis Z176003]
          Length = 340

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 86/285 (30%), Gaps = 14/285 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L +      +L V+  + +     A      +  +    ++  +FA G+ IV+ S GL  
Sbjct: 23  LQRPSTFTFMLIVIVCVTVGAINPAFLQLSNLFDIARASVVVGLFALGVLIVLASGGL-- 80

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
              V   AI A     +             ++  I+ ACG  +           L  ++L
Sbjct: 81  --DVSFTAIAALCMYAVTKFVLWYWPDAPVIAMFIASACGGAILGGINGVLVHSLKTSSL 138

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I++   Q +         G A                            +     +    
Sbjct: 139 IVTIGTQYLYRGGLLTFIGTALYMNIPEQLEQFGKSPLYTVSNINQGITI-----LPLFF 193

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L + F S      L RT +  A   I  N      L   +   ++  F  +    G+AG 
Sbjct: 194 LILVFASLLTWWLLNRTLLGRAIFAIGGNSDIAQRLGFDVRGVQIFVFTYAGLLAGIAGM 253

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKA 287
              AS    +P      E  ++ +++     I GG  ++      
Sbjct: 254 VHVASNRIANPFDLNGLELTVIAAVILGGARITGGSGTVLGTLMG 298


>gi|256377147|ref|YP_003100807.1| Monosaccharide-transporting ATPase [Actinosynnema mirum DSM 43827]
 gi|255921450|gb|ACU36961.1| Monosaccharide-transporting ATPase [Actinosynnema mirum DSM 43827]
          Length = 340

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 92/305 (30%), Gaps = 23/305 (7%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                 S + +  + +   I  + A G ++VV     + L+      + A++   L   +
Sbjct: 40  ANPRFLSAQSLRDVLLGASILTVLAVGQTVVV-ITRNIDLSVGSVLGLSAFAVGSLVRDH 98

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
             +      ++    G    ++    +++ G    + TL     ++ ++  W        
Sbjct: 99  PGTPVAAALLAGAGIGVACGLLNAVLVRYGGVPALVVTLGTLYAYRGLVHTWAG------ 152

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                      G  + +      F +      + + ++++    ++ +  + LR   +  
Sbjct: 153 -----------GGQITADELPRGFLAFADGGVLGVPWLVVVALVVTTAATVLLRDFRLGR 201

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE--- 265
               +  + +A            L AFA S A  G+ G   A     +        E   
Sbjct: 202 ELYAMGSSPRAAQLAGIRTGRNTLIAFAASGALAGLGGVLHAVRFGTVDAAAGTGFELTV 261

Query: 266 --NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
               +V  + + GG  +    A    +L  +      +    F           +     
Sbjct: 262 VAAAVVGGVAVFGGSGTAWGAALGALLLTTIGSALPVLEIDQFWQQTIVGALILVAIGLD 321

Query: 324 MVIAL 328
            ++AL
Sbjct: 322 RLVAL 326


>gi|254453864|ref|ZP_05067301.1| inner-membrane translocator [Octadecabacter antarcticus 238]
 gi|198268270|gb|EDY92540.1| inner-membrane translocator [Octadecabacter antarcticus 238]
          Length = 325

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/319 (9%), Positives = 94/319 (29%), Gaps = 26/319 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +   +    +C   V+    + +      +   + ++     +  + +  ++ ++ S G 
Sbjct: 19  INWRENIVYICFAGVLVFFAITIGDKGFLTVTNLFNISRTTAMIAVISIAMTFII-SSGE 77

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           L L+     A+ A    ++        +L   V+ ++SG    ++    +        + 
Sbjct: 78  LDLSVGSTAALSALVSALVMQAGY--GFLAGVVAGLLSGFAVGLVNGFFVTGLSIPSFLV 135

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL M ++ + I ++                     T   ++                +  
Sbjct: 136 TLGMMQLVRGIDMRITY------------------TNPVAVRNETFDMVFGPGTIGVVPI 177

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + +    ++    + LR T           N +A           K+  F ++     +A
Sbjct: 178 LFIWAVGVAIVGHIALRYTPFGRQVLATGGNSEAARYSGINTNRTKVICFLITGVGAALA 237

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G  +         +  + +E   + ++++      GG  ++        ++  +      
Sbjct: 238 GMLWTGMMGTARYNFGEGAELAAIAAVILGGTSLFGGKGTIIGTLVGALLIGTINNGLII 297

Query: 301 MNFYYFNSLLKFDCSFNMR 319
           M       ++       + 
Sbjct: 298 MGLDVSEQMMVAGGIIVLA 316


>gi|302555954|ref|ZP_07308296.1| ABC transporter permease [Streptomyces viridochromogenes DSM 40736]
 gi|302473572|gb|EFL36665.1| ABC transporter permease [Streptomyces viridochromogenes DSM 40736]
          Length = 324

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 44/322 (13%), Positives = 102/322 (31%), Gaps = 29/322 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  ++D ++  L +V  L  F F+    +   +  +    L   + A  ++++V   G +
Sbjct: 8   RAVRWDTVVGALLIVVLLFSFGFVDGFGNALNLSFLIGNTLPIALIALPMTLLV-VSGEI 66

Query: 67  SLNCVIAYAI-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
            L+      + GA    +      +   + I +   +       + +  L      + I 
Sbjct: 67  DLSVASTAGLSGAVMGALWNQGMAIETIIPICLLLGVVCGLVNGLLVTRLGLPSLAVTIG 126

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL        I++    +T+  +                          +  + + F+ Y
Sbjct: 127 TLAAYRGIAQIVLGSDAVTDFPSQYLDFA--------------------AGRLGDTFIPY 166

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
             L    L A  ++ L  T    +      +++A       +   KL  F V+     + 
Sbjct: 167 AFLPFLVLLAIAVVALHATPFGRSLFATGASEEAARFAGVRVKRQKLILFTVTGLMASLT 226

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCC 299
           G F+A        D       + V++ V+LGG+       +L        +L  +  +  
Sbjct: 227 GIFWALHYASARYDNAT-GLELSVVAAVLLGGIDFDGGKGTLGGAIAGVFLLGALQNVMS 285

Query: 300 GMNFYYFNSLLKFDCSFNMRHT 321
             +    + ++       +   
Sbjct: 286 LQDVSAQSQIVVTGVLLVLSVL 307


>gi|254286576|ref|ZP_04961532.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae AM-19226]
 gi|150423334|gb|EDN15279.1| D-galactose/D-glucose ABC transporter, permease protein [Vibrio
           cholerae AM-19226]
          Length = 337

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/326 (9%), Positives = 95/326 (29%), Gaps = 13/326 (3%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F+++  K   I  +L ++  +++     +  S + + ++  Q  + V+ A G++ ++ + 
Sbjct: 9   FAIKHLKEGAIYAVLFILLAIIVIQ-EPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQ 67

Query: 64  GLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           G   L+      + A      +        ++  +    +++    + +    +      
Sbjct: 68  G-TDLSAGRQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGV 126

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           +     +   I     +      N      V            +             +  
Sbjct: 127 IVAYLKVTPFIATLGSMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSY 186

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +Y ++ + F+         +T        +  N +A       +    L  +A+S  F
Sbjct: 187 ITFYAIIAIIFMWVL----WNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVF 242

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
               G   A      + ++    E   + + V+      GG+ S++ +     I   +  
Sbjct: 243 YAFGGMLEAGRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINY 302

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               +    +   +            
Sbjct: 303 GMTYIGVSPYWQYIIKGSIIIFAVAL 328


>gi|146309954|ref|YP_001175028.1| inner-membrane translocator [Enterobacter sp. 638]
 gi|145316830|gb|ABP58977.1| inner-membrane translocator [Enterobacter sp. 638]
          Length = 331

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 95/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +         ++  + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 30  ILPILILIVAVFGFIAPNFFTESNLLNITRQASINIVLAAGMTFII-LTGGIDLSVGSIL 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A     +         +L   +A++ G    +     + F G    I TL      +
Sbjct: 89  GTTA--VAAMVVSLIPEFAMLSIPAALMLGMVLGLFNGALVAFAGLPPFIVTLGTYTALR 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                          +     F      Y   + ++++    + 
Sbjct: 147 GAAYLLAD-------------------GTTVINSNISFEWIGNNYLGPIPWLVVIALAVI 187

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 188 AICWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGVMSASRLY 247

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 248 SANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 307

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 308 VIKGAVIIIAVLI 320


>gi|77462829|ref|YP_352333.1| branched chain amino acid ABC transporter inner membrane protein
           [Rhodobacter sphaeroides 2.4.1]
 gi|126461721|ref|YP_001042835.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
 gi|332557717|ref|ZP_08412039.1| inner-membrane translocator [Rhodobacter sphaeroides WS8N]
 gi|77387247|gb|ABA78432.1| ABC branched amino acid transporter family, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|126103385|gb|ABN76063.1| inner-membrane translocator [Rhodobacter sphaeroides ATCC 17029]
 gi|332275429|gb|EGJ20744.1| inner-membrane translocator [Rhodobacter sphaeroides WS8N]
          Length = 329

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 102/324 (31%), Gaps = 33/324 (10%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV----------------- 82
            +  +  ++Y + A G  ++  + G+ +    +     A + V                 
Sbjct: 14  LNGLMAGVMYALVALGFVLIFKASGIFNYAQGVLALFAALTLVGLQNGQIPFAHLINAAL 73

Query: 83  ---ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +    + L   L I ++A++       +    LK   +   I   + +      L  
Sbjct: 74  GTNLHSFGWTLPAALAIALTALVMVGLAWAIERLILKHLVNQEPIILFMATIGLAYFLEG 133

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +  G     +   L    +     +    F   F I  + +    L    L A++ L
Sbjct: 134 LGDVMWGADIKMLDVGLPQGISEGIEAVTAEWFGYGFFIDRLDI-VATLVAAALVAALTL 192

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           + + T    A R + D+ +A  S+  ++ F  +  ++++     +AG  + A        
Sbjct: 193 FSQYTKYGRALRAVADDHQAALSVGISLRFVWVLVWSIAGFVALIAGIMWGAKSGVQFSL 252

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                  +  + +++LGG TS+        I+    +L             +   +    
Sbjct: 253 S---LIALKALPVLMLGGFTSIPGAIVGGLIIGMGEKLFEFFAGPLIGGATENWFA---- 305

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
                 +   L ++ R   L   R
Sbjct: 306 -----YVLALLFLVFRPQGLFGER 324


>gi|313672856|ref|YP_004050967.1| amino acid/amide abc transporter membrane protein 1, haat family
           [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939612|gb|ADR18804.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Calditerrivibrio nitroreducens DSM 19672]
          Length = 287

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 94/290 (32%), Gaps = 13/290 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ S      IY + A G +I+  + GL++        +G        + +G++++   
Sbjct: 2   QFLYSGITSGSIYALVAIGYNIIYNTTGLINFAQGEFVVLGGMLMYTTLTMFGVNLFYAF 61

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ ++    G++     L++      I  + ++     IL     +  G          
Sbjct: 62  LITFILMFFVGILFERVFLRYVRLKTEINLITVTIALAIILRGIAMVIWG---------- 111

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 V S +       +          V++   F +  +  + + T    A+R   D+
Sbjct: 112 -RDSLAVPSYVEEKTVMLAGGSITSQSMVVIVVCFFTAIVLSTFFKYTKYGKAFRACHDD 170

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           Q A       +   ++ +FA++S    +AGA  A                +   S  ILG
Sbjct: 171 QVASTICGIDVNLIRMLSFAIASLLGALAGAIIAPITFV--TYTDGVMSGLKGFSAAILG 228

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           GM S         +L  +      +    F     F     +       +
Sbjct: 229 GMGSFWGGLFGGFLLGIIEAFFAFILPSGFKDAFAFIILLLILFIKPSGL 278


>gi|309781140|ref|ZP_07675877.1| ribose ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA]
 gi|308919961|gb|EFP65621.1| ribose ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA]
          Length = 335

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 99/313 (31%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +   +L         S     ++  +I   ++ A G++ ++   G + L+     
Sbjct: 32  LLAALIAMLVLFGTLSPTFFSLPTFTTIANEIPDLLVMAVGMTFILMIGG-IDLSVGSVL 90

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +  S+ G  +        +++ A GM+ G  ++ +        +L + E+ +
Sbjct: 91  ALSASVLSVAMSQLGWGLLPAALAGVVLATAAGMLTGAVTVHWGIPSFI-VSLGVLEMAR 149

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +                          + S + +   P +  I   F+  + + +    
Sbjct: 150 GLAYSLTDSR---------------TVYIGSAVDWLANPIALGIAPSFLIAIAITVVGQI 194

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +     RT        I  N++A           K++ FA+     G+A  F  +  +
Sbjct: 195 VLV-----RTVFGRYLVAIGTNEEAVRLAGVNPRPYKIAVFALMGLLSGLAALFQVSRLE 249

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+ +      I+  +      +        
Sbjct: 250 AADPNAGVGMELQVIAAVVIGGTSLMGGRGSVVRTLFGVLIISVLESGLAQIGASEPTKR 309

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 310 IITGAVIVAAVVM 322


>gi|186475914|ref|YP_001857384.1| monosaccharide-transporting ATPase [Burkholderia phymatum STM815]
 gi|184192373|gb|ACC70338.1| Monosaccharide-transporting ATPase [Burkholderia phymatum STM815]
          Length = 332

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 93/328 (28%), Gaps = 26/328 (7%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
           +IL +  ++             +   + ++   I    + A+G  I++   G + L+  +
Sbjct: 28  RILLVAIILCAYFETANHDFLLTDASLRNLSQFIAPVAIIAFG-EIMLMIGGEIDLSAGM 86

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            +A   +         G   WL +    + +G  G+I G  S+  R              
Sbjct: 87  VFAFAPFVM-HFAHEAGAPAWLAVIAGVVAAGLIGLINGAVSVYLRIPSFVT-------- 137

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
                           G       + L  +  + +              + Y  ++    
Sbjct: 138 --------------TLGTLFFVNGFTLTISRGTPVSPPEDGMFAEFMGAWGYSEIIWTTA 183

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L+A + + LR T           N          +   KL  F +++   G  G      
Sbjct: 184 LAAIMHVTLRHTRWGLHTIASGANPLGASEAGIHVRRLKLGNFILAAVLAGFTGILEGFR 243

Query: 253 RDRISPDMFKFSENIIVISIVILGG--MTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
              I P         + ++  ++GG  +   S       I   V+ +          +  
Sbjct: 244 ISSIDPQAGGNQIMFLAVAAAVIGGTPLAGGSGTIIGGLIGAAVLGILNDGFTLIGINAF 303

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHS 338
            F+          M+  + +V L R   
Sbjct: 304 TFNMILGAAILAAMIFNIHVVRLARKGG 331


>gi|239927406|ref|ZP_04684359.1| ABC transporter membrane protein [Streptomyces ghanaensis ATCC
           14672]
 gi|291435750|ref|ZP_06575140.1| sugar ABC transporter permease protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291338645|gb|EFE65601.1| sugar ABC transporter permease protein [Streptomyces ghanaensis
           ATCC 14672]
          Length = 358

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 94/320 (29%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +  + L AV   +         +    + ++  Q     + A  +++++   G   
Sbjct: 36  LARPEVGVFLGAVAVAVFFLFTAPPVRDGSSMANILYQSSTIGIMALPVALLM-IGGEFD 94

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A    A +  +L  +  L++W  + V+  +S A G   G   +K       + TL
Sbjct: 95  LSAGVAVVASALTASMLSYQLTLNVWTGVIVALAVSLAVGAFNGWMLVKTGLPSF-LVTL 153

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               I Q + +    +  G         +             F      V   +  + V 
Sbjct: 154 GTFLILQGVNLAVTKLVTGNVATDDISDMAGFDQAKAIFASSFEVAGVQVKITVVWWLVF 213

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +            RT   N    +  N+++  ++   + F K+S F +        G 
Sbjct: 214 AALATWVLL------RTKYGNWIFAVGGNKESARAVGVPVTFTKISLFMLVGFGAWFVGM 267

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
               S + +        E I + + VI      GG  S         +   V +      
Sbjct: 268 HNLFSFNTVQSGEGVGQELIYIAAAVIGGCLLTGGYGSAIGPVFGAFMFGMVQQGIVYAG 327

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
           +                   
Sbjct: 328 WNPDWFKAFLGVMLLGAVLI 347


>gi|167768701|ref|ZP_02440754.1| hypothetical protein ANACOL_00017 [Anaerotruncus colihominis DSM
           17241]
 gi|167669099|gb|EDS13229.1| hypothetical protein ANACOL_00017 [Anaerotruncus colihominis DSM
           17241]
          Length = 325

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/318 (12%), Positives = 89/318 (27%), Gaps = 28/318 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              I  +L +++  L         +   + ++  QI +  + A G +IVV   G L L+ 
Sbjct: 18  KLGIWAILVLLFLFLSVTTGDTFLTASNLINLIRQICVTGVCAIGAAIVV-CGGELDLSS 76

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A+   +  +L   +G   WL    +         ++G      R         +M 
Sbjct: 77  GSLAALAGCASAMLAVNFGWPTWLAFVAAIAGGACIDALIGCVIAFLRVPAFIATLGMMY 136

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +    L+                    +            +      Y   + ++++ +
Sbjct: 137 VLDGFTLL--------------------MTRGTPITNLPDSYKFVGRGYIGPIPFIVVIL 176

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L A      + T       ++ +N  A       +   K+++FA +     +AG    
Sbjct: 177 LILVAVFAFIFKYTQFGRNIVSVGENATAAHLSGINVRLIKIASFACAGILSSLAGIMLM 236

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFY 304
           A      P        +  ++ V +GG        +  K       +  +      +   
Sbjct: 237 ARLGSGQPTAAS-DLCLTAMAAVFVGGTSAINTQGAAFKTLAGALFIGMINNGLNMLEIN 295

Query: 305 YFNSLLKFDCSFNMRHTT 322
            +   +            
Sbjct: 296 AYWQKIVLGFIIISAIAL 313


>gi|157364182|ref|YP_001470949.1| monosaccharide-transporting ATPase [Thermotoga lettingae TMO]
 gi|157314786|gb|ABV33885.1| Monosaccharide-transporting ATPase [Thermotoga lettingae TMO]
          Length = 343

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 78/309 (25%), Gaps = 16/309 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++     +L         +   + ++  Q  + +  A G++ V+   G + L+      
Sbjct: 35  VIILFGLFILFSFLSNRFLTVGNLWTILRQTSVNLCIAVGMTYVI-LAGGIDLSVGSTLG 93

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                  +          +      +  G  G  +          +L    +    +   
Sbjct: 94  FAG---AVTARLLKYGFTMSTFGVVLQFGVVGASVIGILAGLIVGFLNGFIITFFNVPAF 150

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           +             +     L+  G  +  L   F    S     I     +  +     
Sbjct: 151 VAT-----LGTMTAVRGFVMLWTKGYPITKLGNTFNMIGSGWFLGIPTPVWIAALITFIG 205

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           SI L   R         +  N+KA           KL  + +S     +AG    +  D 
Sbjct: 206 SIFLRASR--FGRYVYAVGGNEKAAILSGVNSKATKLVTYMISGTLAALAGLIITSRLDS 263

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P+     E   + + VI      GG  ++        I+  +           F   +
Sbjct: 264 AQPNAGLQYELDAIAATVIGGASLSGGKGTIEGTLIGALIIGVLNNGLVLTGVSPFWQQV 323

Query: 311 KFDCSFNMR 319
                    
Sbjct: 324 AKGFIIIAA 332


>gi|241662557|ref|YP_002980917.1| monosaccharide-transporting ATPase [Ralstonia pickettii 12D]
 gi|240864584|gb|ACS62245.1| Monosaccharide-transporting ATPase [Ralstonia pickettii 12D]
          Length = 335

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 99/313 (31%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +   +L         S     ++  +I   ++ A G++ ++   G + L+     
Sbjct: 32  LLAALIAMLVLFGTLSPTFFSLPTFTTIANEIPDLLVMAVGMTFILMIGG-IDLSVGSVL 90

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +  S+ G  +        +++ A GM+ G  ++ +        +L + E+ +
Sbjct: 91  ALSASVLSVAMSQLGWGLLPAALAGVVLATAAGMLTGAVTVHWGIPSFI-VSLGVLEMAR 149

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +                          + S + +   P +  I   F+  + + +    
Sbjct: 150 GLAYSLTDSR---------------TVYIGSAVDWLANPIALGIAPSFLIAIAITVVGQI 194

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +     RT        I  N++A           K++ FA+     G+A  F  +  +
Sbjct: 195 VLV-----RTVFGRYLVAIGTNEEAVRLAGVNPRPYKIAVFALMGLLSGLAALFQVSRLE 249

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+ +      I+  +      +        
Sbjct: 250 AADPNAGVGMELQVIAAVVIGGTSLMGGRGSVVRTLFGVLIISVLESGLAQIGASEPTKR 309

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 310 IITGAVIVAAVVM 322


>gi|218508120|ref|ZP_03505998.1| sugar ABC transporter, permease protein [Rhizobium etli Brasil 5]
          Length = 323

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 90/311 (28%), Gaps = 23/311 (7%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  + VV  ++         +   +  +     I ++ A    + V     + L+    
Sbjct: 1   MLFAIIVVMIVIFSTRAADFATPDNLAGIFNDTAILIILALAQ-MTVILTKSIDLSVAAN 59

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            A       ++ + +     +++ ++A+  GA    +    +        + TL    I+
Sbjct: 60  LAFTGMVIAMMNAAFPGLPLIVLILAAVAIGAALGTINGFLVWRLEIPPIVVTLGTLTIY 119

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           + +                       G  V +      F +      + +  +      +
Sbjct: 120 RGMAFVLSG-----------------GAWVNAHQMTPTFLAVPRTPILGLPVLSWVAIII 162

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
            A + + LR +    +      N  A           K  AF +S A  G++   + +  
Sbjct: 163 VALMYMLLRYSQFGRSAYATGGNPTAAVYAGIDTGRTKFLAFVLSGALAGLSSYLWVSRY 222

Query: 254 DRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                D+    E   V + V     I GG+ S++        L  +      +    F  
Sbjct: 223 AVAYVDIANGFELDSVAACVIGGISIAGGVGSVAGTVLGALFLGVIKNALPVIGISPFTQ 282

Query: 309 LLKFDCSFNMR 319
           +        + 
Sbjct: 283 MAISGTVIILA 293


>gi|167841877|ref|ZP_02468561.1| inner-membrane translocator [Burkholderia thailandensis MSMB43]
          Length = 286

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 103/304 (33%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++Y + A GLSIV G L  ++      Y +GAY       ++  S W+ +  
Sbjct: 8   IVNGIGVGMLYFLLAVGLSIVFGLLRFVNFAHGAFYLLGAYFCY-QALQWSASFWVALAA 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +  GA   I+    L+          ++ +     +L +   +  G  G  V      
Sbjct: 67  VPLAVGAFAWIVEKLVLRHVYAQQHEFHILATVGLALVLQECAILAWGPLGDNVPVPDAL 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  +              +Y  +  +V+     L+A +   L  T + +A R   ++ +
Sbjct: 127 NGVVI----------WGGFVYPKYRLFVIGFTAVLAALLWWVLDGTRLGSAVRAGSESSE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       FA+ +A   +AG   A  R        +      V+ +V    M
Sbjct: 177 MVSLLGINVSRVFSLVFALGAATAALAGVLAAPIRGVDPFMGIEALGVAFVVVVVGG--M 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +         ++  V  +   +              +      ++ +A+  V+L+R + 
Sbjct: 235 GNFPGALVGGLLVGIVQSVMSTL--------------WPEGARLMIYVAMAAVLLLRPNG 280

Query: 339 LLRL 342
           LL  
Sbjct: 281 LLGR 284


>gi|162456521|ref|YP_001618888.1| ribose ABC transporter permease [Sorangium cellulosum 'So ce 56']
 gi|161167103|emb|CAN98408.1| Ribose ABC transporter permease protein [Sorangium cellulosum 'So
           ce 56']
          Length = 351

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 52/327 (15%), Positives = 106/327 (32%), Gaps = 6/327 (1%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LR N+   +   L +V+  L  L      S   +     +  + V  A   +I V   G 
Sbjct: 8   LRQNQGLLVAVGLCIVFYGLYSLSHPKGFSASLVGQNANESFVLVAAAMAQTIPV-LTGG 66

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           L L+      +       + +   L+++L I +   +  A G++ G   +  R   +   
Sbjct: 67  LDLSVGAVITLVNCVASHVLAGSALTMFLGILLCLAVGMAAGLLNGCLVVYGRLQPIIAT 126

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
               +      L           G       + L   +++        +   + +I    
Sbjct: 127 LASGTIFLGVALFLRPTPGGQVDGDLAFAATFDLNELLQAAGAAPLDGALGFVGQIPSPA 186

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + + +    A +  + RRT        +  +Q+A +     I   KL+A+ +S  F  + 
Sbjct: 187 IWMALL---ALLWAYYRRTRYGLGAYAVGASQEAAYMSGVRIKRVKLAAYTLSGFFASVG 243

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA--ILIGVVELCCGMNF 303
           G + A      + D+ +     +     ++ G TSL          +   +V      NF
Sbjct: 244 GLYLALQTTSGNADIPQAGSYTLNSIASVVIGGTSLYGGIGGAIGSLFGALVLRSVAFNF 303

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFL 330
             F+         N  +  L    + L
Sbjct: 304 RVFDEGSALGLLANPLYQPLFEGLILL 330


>gi|291523087|emb|CBK81380.1| monosaccharide ABC transporter membrane protein, CUT2 family (TC
           3.A.1.2.-) [Coprococcus catus GD/7]
          Length = 345

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 38/315 (12%), Positives = 94/315 (29%), Gaps = 11/315 (3%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I     +    ++          +   ++ I     ++ A G +IV+   G + ++    
Sbjct: 25  IALFAIMYIAGMVIFADKGFAKPQMFLNLFISNAGLLVIAVGQTIVM-ITGGIDISVGSI 83

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            A+           +G+S +  I V+ +I  A G++ G            ++   +    
Sbjct: 84  TALVCMVMANQMENHGMSAYAAIAVALLIGLAFGIVQGFLISYLEIQPFIVSLAGLFFGR 143

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
               +    + + K   ++A     +            +  S   +  ++Y  ++    +
Sbjct: 144 GMTSMVSTEMISIKNETFLAWANAKIYLPFIG-----SYSKSGKFHPAYIYPTVIIALII 198

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
            A I + ++ T        +  N ++   +   +   K  A+ +     G  G  F  + 
Sbjct: 199 VAIIAVVMKYTKFGREVYAVGGNAQSALMMGLNVKRIKFKAYVLEGLLAGCGGFLFCLNS 258

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                +  K  E   + + VI      GG+ +         I   +  L           
Sbjct: 259 CAGFVEQAKGLEMDAISASVIGGTLLSGGVGTPFGTIFGVLIKGTITSLITTQGTLSSWW 318

Query: 309 LLKFDCSFNMRHTTL 323
           +     +       L
Sbjct: 319 VRIVLSALLCFFIVL 333


>gi|291616059|ref|YP_003518801.1| RbsC [Pantoea ananatis LMG 20103]
 gi|291151089|gb|ADD75673.1| RbsC [Pantoea ananatis LMG 20103]
          Length = 350

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 92/313 (29%), Gaps = 25/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L  V   ++  L  G   S     ++  Q    ++ A  +++V+ + G + L+     
Sbjct: 44  IALFFVFCCVVFSLITGNFLSSANWLNIIRQSAPLLIVATAMTLVI-TTGGIDLSVGSTL 102

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      I  + +GL   +++    ++    G I G            +    ++ +  
Sbjct: 103 ALVGALSAIALNNWGLPWPVVLLGGLLLGALVGAINGFFIAYEGIPAFIVTLATLAVVRG 162

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+                 +    +        F F     +  + M  ++  +  + 
Sbjct: 163 VALL-----------------ITQGYSIPIPADSLFAFMGRAKVLGVPMPALIGIVVLIV 205

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I+L   R         I  N +             +  + +S     +AG    A   
Sbjct: 206 GHIVLNHMR--FGRYVTAIGANAEGARRSGINTKAVTMKVYIISGMAAALAGMIITARLG 263

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             S +  +  E  ++ ++V     + GG  ++         +  +       +   F + 
Sbjct: 264 SGSSNQGEGFELQVIAAVVLGSTSLFGGFGTIIGTLLGALSIAIIQNGLILSHISPFYTQ 323

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 324 IATGTIILLAIWL 336


>gi|190895038|ref|YP_001985331.1| putative sugar ABC transporter permease [Rhizobium etli CIAT 652]
 gi|190700699|gb|ACE94781.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           CIAT 652]
          Length = 373

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 80/304 (26%), Gaps = 20/304 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L  V             S   + ++        + A   ++++   G   L+     
Sbjct: 36  VAGLVFVIVFFFLTADSTMFSLSGLMTIMAPASQLGILAIAAALLM-IGGEFDLSIGSMV 94

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A     + ++ + +G  + + I ++ + +   G I G   +  R     +    +  +  
Sbjct: 95  AFAGLIFGVILTNFGQPLSVAIVMTMLFAAFMGAINGQIVIHTRLPSFIVTLAFLFILRG 154

Query: 135 NILIKWKPITNGKAGIYVADR--------------LYFLGTTVRSLIRFFRFPSSFVIYE 180
             L+  K  T G   +                            +         + +   
Sbjct: 155 LTLVGLKWATGGSTQLRGIGDHVKDSPLLGLFSGDALKGLFVWLADHDLIDKFPNGLPKV 214

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             +   +L    L+ +    L RT + N       +  A  +    +   K   FA+++ 
Sbjct: 215 TGIPVSVLWFVVLALAATWVLLRTRMGNWIFAAGGDPNAARNSGVPVHRVKTGLFALTAC 274

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVV 295
              +                    E   +I+ VI      GG  S         I   V 
Sbjct: 275 AAALVAIITVLDAGSTDARRGFQKEFEAIIAAVIGGCLLTGGYGSAIGAFFGAIIFGSVS 334

Query: 296 ELCC 299
               
Sbjct: 335 IGLT 338


>gi|13471127|ref|NP_102696.1| permease protein of sugar ABC transporter [Mesorhizobium loti
           MAFF303099]
 gi|14021871|dbj|BAB48482.1| permease protein of sugar ABC transporter [Mesorhizobium loti
           MAFF303099]
          Length = 331

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/313 (10%), Positives = 81/313 (25%), Gaps = 25/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + +V          +      + ++G Q+ ++ + + G++ V+     + L+     
Sbjct: 30  LLWVLIVLCAFAVYLSPSFIQTGNMLNVGRQVALFGIVSVGMTFVI-LTRGIDLSVGSIV 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A +  ++ S        +I    M +    +            ++     ++     
Sbjct: 89  GVVAVATALMLSSGVPIPLAMIAALGMGAVFGAINGAGVVFFGMPPFIMTLGTLVMG--- 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                    G           F      +   +   +     ++
Sbjct: 146 ----------------RGIAMTIANGEPKTLGDASDAFSYLGSGFLFGIPVPIWIFVAIA 189

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A   + LR T        +  N +A       +    +S +A+S     +    F +   
Sbjct: 190 AVAFVVLRHTPFGRQIYAVGSNTEAARLAGINVPRVLMSVYAISGVLSALTALVFVSRLT 249

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   +  +VI      GG   +       AI+  +  +   +    F   
Sbjct: 250 VGEPTAGTNLELEAISIVVIGGTSLFGGEGGVIGTVIGAAIIAVMANILNLLGISPFTQQ 309

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 310 IVKGAIIIAAVMF 322


>gi|260882993|ref|ZP_05894607.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
           abortus bv. 9 str. C68]
 gi|260872521|gb|EEX79590.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
           abortus bv. 9 str. C68]
          Length = 185

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 51/170 (30%), Gaps = 15/170 (8%)

Query: 172 FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAK 231
           F    +   +      +    +S  +  ++  T +  A R    N  A            
Sbjct: 28  FNVYGITIPLMNLLAFIAAFVVSGFMFFFMMTTKLGRAIRATAQNLTAARLYGVEPRHLY 87

Query: 232 LSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAIL 291
              F +  A  G+AG  +A                    +I I+GG+ +   +     IL
Sbjct: 88  AVTFGIGVAIAGVAGGLYATVNQL--NPYIGVPLTAKSFAITIIGGLDNPLGVILGGLIL 145

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
             +  L        + +++ F               L LV+++R   LL 
Sbjct: 146 GVIESLTVLYLGDTYRNVVSFS-------------ILVLVLIIRPGGLLG 182


>gi|254254328|ref|ZP_04947645.1| Ribose/xylose/arabinose/galactoside ABC-type transport systems
           permease component [Burkholderia dolosa AUO158]
 gi|124898973|gb|EAY70816.1| Ribose/xylose/arabinose/galactoside ABC-type transport systems
           permease component [Burkholderia dolosa AUO158]
          Length = 346

 Score = 52.6 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 99/320 (30%), Gaps = 28/320 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  VV  + + +   +  S   ++++  Q+ I  + A G++ V+   G + L+     A
Sbjct: 51  LVGLVVVCIAMMIASPSFLSAANLENVLRQVSINAIIAVGMTCVI-LTGGIDLSVGSVMA 109

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L      +   L    A+  G   +     +    G    I TL    I + 
Sbjct: 110 LSGTLAAGLMVAGVNAAAALAIGIAVGFGFGFVNGIFVAFA--GMPPIIVTLATMGIARG 167

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +                 +Y  G  +  L  +  F  S  +  I    +++ + +  A
Sbjct: 168 LAL-----------------IYTGGYPIDGLPDWVSFFGSGKVLGIQAPVLIMIVVYAIA 210

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++L   R         I  N++A       +   KL  + ++     +A          
Sbjct: 211 WLLL--ERMPFGRYVYAIGGNEQATRLTGVRVARVKLIVYTLAGVTSALAAIVLTGRLMS 268

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
                      +  I+ V++GG              I    +   +     N L     +
Sbjct: 269 -GQPNAGVGFELDAIAAVVMGGT-----SISGGRGAILGTLVGALLLGVLNNGLNMVGVN 322

Query: 316 FNMRHTTLMVIALFLVILMR 335
             +++     I L  + + R
Sbjct: 323 PYVQNVIKGGIILLAIYISR 342


>gi|296273329|ref|YP_003655960.1| inner-membrane translocator [Arcobacter nitrofigilis DSM 7299]
 gi|296097503|gb|ADG93453.1| inner-membrane translocator [Arcobacter nitrofigilis DSM 7299]
          Length = 300

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 70/225 (31%), Gaps = 3/225 (1%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G + L++       A  AY  + L +++  S  L +  
Sbjct: 8   LINGLTVGSLYALVALGYTMVYGVMKLINFAHGDLVAFSAYVGLTLFTQFYGSNALTLVN 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++     +I+    +                      +    +      +     +  
Sbjct: 68  IIIVFTLTAIIVAFVGVLLERLAYRPLRTAPRLSAVVSALGASLVIQNGIMLIWGPNMEI 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V        +    VI       +L     L  ++ L++ +T +  A R    +Q 
Sbjct: 128 FPANVFPST---SWNFGGVIISFTQLVILALSAVLMVALYLFINKTKMGTAIRATAIDQD 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF 263
           A   +   +    ++ F + S    + G F       ++ DM   
Sbjct: 185 AAKLMGINVNRVIMTIFIIGSMLGAIGGLFIGMYYRGLTFDMGWL 229


>gi|260102685|ref|ZP_05752922.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus helveticus DSM 20075]
 gi|260083509|gb|EEW67629.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus helveticus DSM 20075]
 gi|328464887|gb|EGF36184.1| sugar ABC transporter permease protein [Lactobacillus helveticus
           MTCC 5463]
          Length = 318

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/270 (11%), Positives = 73/270 (27%), Gaps = 2/270 (0%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G++++       +GA++ +I    +  +     P    + GA    +      F    L
Sbjct: 34  SGIVNIGLEGIMTVGAFTSIIFNLTFAHAFGSATPWIGALVGAIFGSIFSLLHAFATINL 93

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
               +I   +   +                            ++      P    I+   
Sbjct: 94  RADHIISGTVLNLLAPPLGVFLIKAIYEKGQTPNITANFGYTNIPGLANIPVIGKIFFTN 153

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
                     ++  +   L +T +    R+  +N +A  +L   +   +      S    
Sbjct: 154 TSAPAWWAIIITIFLWWVLYKTRLGLRLRSTGENPQAADTLGINVYKMRYIGVLTSGFMA 213

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+ GA FA S            +  + ++ VI  G  +      ++            + 
Sbjct: 214 GLGGAVFAQSISGNFSISTIVGQGFMALAAVIF-GKWNPIGAMLSSLFFGFAQS-LSIIG 271

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
                          +    + ++ L L +
Sbjct: 272 NQLPGIAKIPTVYMQIAPYVITIVVLVLFL 301


>gi|116627142|ref|YP_819761.1| ribose/xylose/arabinose/galactoside ABC-type transporter permease
           [Streptococcus thermophilus LMD-9]
 gi|116100419|gb|ABJ65565.1| Ribose/xylose/arabinose/galactoside ABC-type transport system,
           permease component [Streptococcus thermophilus LMD-9]
          Length = 584

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 77/239 (32%), Gaps = 16/239 (6%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
              + +   Q L++ + A G+ I    L L  L     + +GA +  I+  R        
Sbjct: 348 SNVVLTSISQGLLWAIMAIGVFITFRILDLADLTAEGTFPLGAATTTIMIIRGIN-PIFA 406

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
                +     G + G    K +   L    + ++ ++   L+         +G      
Sbjct: 407 TLGGFVAGMFAGAVSGFMHTKMKIPALLTGIITLTGLYSVNLLVLGSANISLSGHN---- 462

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                +     +  + L    L   +++ L  T +  A R I D
Sbjct: 463 -----------TLVTMVMGLGLSKLSGVILLGLIFVSLVVFMLVVLLNTQVGLALRAIGD 511

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           N     +    +   K+  + +S+  I ++GA  A +      +M   +    + +I++
Sbjct: 512 NLAMGEANGIKVDRMKILGYMISNGLIALSGALLAQNNGYADMNMGTGTIVNGLAAIIL 570


>gi|297190139|ref|ZP_06907537.1| ribose transport system permease rbsC [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197722475|gb|EDY66383.1| ribose transport system permease rbsC [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 323

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 83/291 (28%), Gaps = 30/291 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +        L    F     +   + +  IQ+   V+ A G+++V+G+ G + L+   A 
Sbjct: 27  VYAAVAALLLFNAFFTEHFLTADNLRTQLIQVAPVVIVALGMALVIGTEG-VDLSVGSAM 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +      +   L+  ++  + GA                     L+     Q
Sbjct: 86  ALAAAVLPLYLGYGLVPALLIALLAGAVVGAVNGT-----------------LVSVVGLQ 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+        G            +       I      +      + +  V+L    L+
Sbjct: 129 PIVATLALFVGG------RGIALVMADGQLKQIANPDLLALGTGSFLGIPLVVLIAGVLA 182

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++   + RT        I  N+ A       +       + +      +AG    A   
Sbjct: 183 LAVAFLVHRTTFGRQVVAIGGNRPAAALAGLPVKRVLTGVYILCGVLAALAGILATARLT 242

Query: 255 RISPDMFKFSENIIVISIVILGGM----TSL--SKIAKATAILIGVVELCC 299
              P        +  I+ V++GG      S+          ++  +     
Sbjct: 243 ASDPSSLGNLMELSAITAVVVGGTPLSGGSIRVLGTVAGALLMQLLRATLV 293


>gi|71734046|ref|YP_274570.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|289626465|ref|ZP_06459419.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289647183|ref|ZP_06478526.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|71554599|gb|AAZ33810.1| branched-chain amino acid ABC transporter, permease protein
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|330868316|gb|EGH03025.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330988867|gb|EGH86970.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 293

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 90/305 (29%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A ++V L  R     W  +  
Sbjct: 8   LIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGAMVLFAALTFVSLLERGVPFFWAFLAT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A +     +I  +           I  +    +   I    + +               
Sbjct: 68  LASMVVLALLIERMVLRPLVNRPPIILFMATLGLSYMIEGLAQALWGA------------ 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F  +       L  ++ L   RT I  + R + D+  
Sbjct: 116 QVHGLELGIPDEPLEIRGMLLSQFDLFAAGTAAALVIALSLLFNRTRIGLSLRAVADDPL 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +       +AV+     +AG  + A               +  + ++I+GG 
Sbjct: 176 ASLAVGIRLPRIWAVVWAVAGFVGLVAGLLWGARLGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S+        I+    +L          S ++              +   L +L+R   
Sbjct: 233 SSIGGAIVGGLIIGAAEKLAEIYLGPIIGSGIENWVP---------YVLALLFLLVRPAG 283

Query: 339 LLRLR 343
           L   R
Sbjct: 284 LFGER 288


>gi|284045774|ref|YP_003396114.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283949995|gb|ADB52739.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 355

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/314 (13%), Positives = 96/314 (30%), Gaps = 21/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +        L+ +L   A  S   + SM   +    + A G ++++   G   L+     
Sbjct: 49  VIAALAGLVLVFWLLEPAFLSSTNVRSMLTAVSFVGIIAIGQTLLL-VAGEFDLSVGSVA 107

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     L ++  L + + I          G+I G+  +                   
Sbjct: 108 GLSAIVSAWLMTKGNLPVPVGILGGLATGALVGLINGVLVVGVGIP-------AFIATLG 160

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      I     G  +      +G                      + +  + +  L+
Sbjct: 161 MLYAARGFIYVITNGYPIYPLPRSVG------------EIGSAEVLFGLGWSFVLLVVLA 208

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + LRRT +         N++    +  +    K++ F V  A   +AG    A   
Sbjct: 209 VVADVVLRRTTVGRNLYATGGNREVARLVGISTGRVKIACFMVVGALSAVAGMLVLADGA 268

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                       + VI+ V++GG++    +    A ++G++ L    +      +     
Sbjct: 269 S-GTPSIGTGWELTVIAGVVIGGVSLFGGVGTVAAGIVGMLLLQVVQSGLVVVGVNPNWQ 327

Query: 315 SFNMRHTTLMVIAL 328
           +  +    ++ + +
Sbjct: 328 TVAVGLIMVLAVGV 341


>gi|269837567|ref|YP_003319795.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
 gi|269786830|gb|ACZ38973.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
          Length = 292

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 48/289 (16%), Positives = 98/289 (33%), Gaps = 10/289 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +YV  A G ++  G L ++         +G +    L    G+  + L+PV
Sbjct: 8   IANGVLIGGLYVGIAIGFALAFGVLDVVDFAVGEWVMLGGFLGFYLWQWLGVDPFFLLPV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  G ++     + R    A   L+       I +  +  T    G         
Sbjct: 68  AFLVFGVAGYLLAPLIYRVRSGSYARPALMALAFTFGISLIMRGSTLTLLGFN------- 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              TV + +    F    +               + A+ +++L RT +  A R +  N++
Sbjct: 121 -TRTVTTQVGQQTFMLGQIALPGLRVVAFAFALLVIAAFLIFLYRTRLGLAIRAVAQNRQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       +A+ +A  GM G   AA               +    +V+L G+
Sbjct: 180 TAGLMGIDVKRVSAIVYALYAALTGMVGVLMAAIYSV--NAEVGIRYTLFAFFVVVLAGL 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            S+S +  A   L  +  L        +  L+ F   +     +   + 
Sbjct: 238 GSISGVLAAGLFLGILEALSAVYVGGSYTYLIVFGVLYLALVVSPHGLL 286


>gi|167818243|ref|ZP_02449923.1| sugar ABC transport system, membrane protein [Burkholderia
           pseudomallei 91]
          Length = 326

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 92/311 (29%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 27  VLVLLCVGFGFMTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 85

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S      WL IP +  +  A G++ G      R     +    ++ +     
Sbjct: 86  A-VASLLASNLPGWGWLGIPAALAVGLAFGVVNGGLISFLRLPPFIVTLGALTAVRGIAR 144

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    +G           F        + + ++++    + A  
Sbjct: 145 L--------------------MGNDTTIFNPQLPFAFIGNGSILGVPWLVVIALAVVAVS 184

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +      +  N +A       +   +L  +A S    G+     AA     +
Sbjct: 185 WFILRRTVLGMRIYAVGGNPEAARLSGINVRGIELFVYASSGLLAGLGALMSAARLYAAN 244

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 245 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLVGALIIAVLSNGLVLLGVSDIWQYII 304

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 305 KGLVIIGAVAL 315


>gi|163794272|ref|ZP_02188244.1| inner-membrane translocator [alpha proteobacterium BAL199]
 gi|159180440|gb|EDP64961.1| inner-membrane translocator [alpha proteobacterium BAL199]
          Length = 307

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 86/268 (32%), Gaps = 9/268 (3%)

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
            +++G + +++L     + IGAY  + + +  G   +  +     +      ++ L    
Sbjct: 27  MLIIGVMEVINLAHGSLFTIGAYVALAVMAPDGGLPYAFMEPYYALPAIPRYLIALVVGP 86

Query: 117 FRGDY------LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                      L +     S+    +L+ +      +  I            V   I   
Sbjct: 87  LVAGAVGMGLELCLRRTYGSDPLYGLLLTFGAALVLEELIREIWGSSEYYLPVPQQISG- 145

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
            F +  +IY  +  Y  +    +   + L+L +T      +    + +   +L   +   
Sbjct: 146 GFIAGNLIYSTYRIYAAVFAAGMIGVLWLFLNKTPYGAVIKAGAHDSEMVRALGYNLTRL 205

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           +L  F   +A  G+AG   A         +      I    I++LGG+ S      A  +
Sbjct: 206 RLLVFGFGAALAGIAGVIMAP--IWGIRPVVGVDAVIPAFVIIVLGGVGSFWGAVSAGIM 263

Query: 291 LIGVVELCCGMNFYYFNSLLKFDCSFNM 318
           +  VV L       +    +       +
Sbjct: 264 VGLVVALTAAFLTDWSLLSMYLLLLAVV 291


>gi|83950607|ref|ZP_00959340.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
 gi|83838506|gb|EAP77802.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
          Length = 320

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/325 (11%), Positives = 101/325 (31%), Gaps = 33/325 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---------------- 82
             +  +  ++Y + A G  ++  + G+ +    +     A + V                
Sbjct: 4   FFNGLMAGVLYALVALGFVLIFKASGIFNYAQGVMALFAALTLVGIMEGQVPFAHLINAI 63

Query: 83  ----ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               I    + +   L I ++ ++  A    +     +   +   I   + +      L 
Sbjct: 64  FGTEIHHFGWHVPGLLAILLTMVVMIALAWAVNQFIFRHLVNQEPIILFMATIGLAYFLE 123

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               I  G     +   L          + +  F   F I  + +   L+    +  +++
Sbjct: 124 GVGDIMWGSDIKKLDVGLPQGINGPIDELTYNIFNYGFFIDNLDLVATLVAALLV-IALV 182

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           ++ + +    A R + D+ +A  S+  ++ F  +  ++++     +AG  +         
Sbjct: 183 IFAQYSKQGRAMRAVADDHQAALSVGISLNFIWVMVWSLAGFVALVAGIMWGTKSGVQFS 242

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                   +  + +++LGG TS+        I+    +L             +   +   
Sbjct: 243 LS---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFAVGPMVGGATENWFA--- 296

Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343
                  +   L ++ R   L   +
Sbjct: 297 ------YVLALLFLVFRPQGLFGEK 315


>gi|254476091|ref|ZP_05089477.1| inner-membrane translocator [Ruegeria sp. R11]
 gi|214030334|gb|EEB71169.1| inner-membrane translocator [Ruegeria sp. R11]
          Length = 328

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/324 (11%), Positives = 100/324 (30%), Gaps = 33/324 (10%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV----------------- 82
            +  +  ++Y + A G  ++  + G+ +    +     A + V                 
Sbjct: 13  LNGLMAGVLYALVALGFVLIYKASGIFNYAQGVMALFAAMTLVGIMNGQVPFSHLINAIF 72

Query: 83  ---ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              I    + +  ++ I ++  +      ++    ++       I   + +      L  
Sbjct: 73  GGHITHFGWTVPSFVAILLTVGVMVLLAWMVQQFVMRHLVGQEPIILFMATIGLAYFLEG 132

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +  G     +   L            F  F   F I  + +   ++    + A ++ 
Sbjct: 133 VADLMWGSEIKTLDVGLPQGINLWIDERTFEIFDYGFFIDNLDLVATIIAALLV-AGLVA 191

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           + + T    A R + D+ +A  S+  ++ F  +  ++V+     +AG  +          
Sbjct: 192 FAQYTKQGRAMRAVADDHQAALSVGISLNFIWVLVWSVAGFVALVAGIMWGTKSGVQFSL 251

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                  +  + +++LGG TS+        I+    +L   +         +   +    
Sbjct: 252 S---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFLVGPLVGGATENWFA---- 304

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
                 +   L ++ R   L   +
Sbjct: 305 -----YVLALLFLVFRPQGLFGEK 323


>gi|167761428|ref|ZP_02433555.1| hypothetical protein CLOSCI_03838 [Clostridium scindens ATCC 35704]
 gi|167661094|gb|EDS05224.1| hypothetical protein CLOSCI_03838 [Clostridium scindens ATCC 35704]
          Length = 324

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/314 (12%), Positives = 103/314 (32%), Gaps = 25/314 (7%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L +  +V+ +L   +     +     ++ +Q  +  +   GL+  +  LG + L+CV  
Sbjct: 20  LLLIGVIVFIILKPNYFNPIANPSLYLNIPMQASVMGVMTIGLAGTI-LLGDIDLSCVGI 78

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            A+ A + +++     + I + + +  ++    G + G+   K +   L    L M+ + 
Sbjct: 79  MAVSAATGILIFKNGIVPIPIAMIIILIMGALLGFVNGVLIAKLKAVALIET-LAMNTLL 137

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +++                                           F+ ++++    +
Sbjct: 138 AGVVLAITRGRTITINEKGYT------------------ILGQGKIGGFLPFLVIIFLLV 179

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              +     RTA+  +   +  N +        +   +++AF +S    G+AG   ++  
Sbjct: 180 YIIMYFVWNRTALGRSLFAVGGNARCAKVSGINVDRIRIAAFTISGLMAGLAGLMLSSKM 239

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
             I+          I+ + VI      GG+  +S +     +L  +           +  
Sbjct: 240 GSINSVFGSSYSMDIIAAAVIGGTSLAGGVGKVSGVLGGVLLLNFIQVGLQVFGMDSYYV 299

Query: 309 LLKFDCSFNMRHTT 322
                    +    
Sbjct: 300 EAATGLIILLAVLI 313


>gi|116255148|ref|YP_770982.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259796|emb|CAK02888.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 329

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 89/307 (28%), Gaps = 20/307 (6%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
             L  + +V  L L     +  + + +  +        + A GL +VV   G + ++   
Sbjct: 14  FWLLAVVIVLSLFLTAATDSFLTLQNLFDLLTSTSFAGILAAGL-LVVLVFGGIDISFTA 72

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
             ++  Y  +++   Y +  + +  V+      CG+       K R          +   
Sbjct: 73  IASVAQYVALMIAKTYPIGWFGVFLVACCTGILCGLFNAAIIHKVRIS-------SVIVT 125

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
              + I +  +     G Y+     +    +            + I    +  V+     
Sbjct: 126 ISTLNIFYGLLIYITRGDYITSLPSYFREGIWWFEFTDSNGFPYAINFQALLLVVAFFMT 185

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
                     +T I      +  N+ A   L   +   +   +        +A    A  
Sbjct: 186 WVLL-----NKTNIGRQIYAMGGNEIAAERLGFHVFGLRCLVYGYMGFMAAIASISQAQL 240

Query: 253 RDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYF 306
              ++P      + + V++ V+LGG        S+        ++  +      +    +
Sbjct: 241 AQSVTPTTL-IGKELEVLAAVVLGGASLAGGNGSVFGAVLGVMLIAILQNGLILLGVSSY 299

Query: 307 NSLLKFD 313
            +     
Sbjct: 300 WNQFFVG 306


>gi|150396137|ref|YP_001326604.1| monosaccharide-transporting ATPase [Sinorhizobium medicae WSM419]
 gi|150027652|gb|ABR59769.1| Monosaccharide-transporting ATPase [Sinorhizobium medicae WSM419]
          Length = 336

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 89/313 (28%), Gaps = 24/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +   A+V  + L        ++  + S+  QI +  + A G + V    G + L+    +
Sbjct: 35  VIFAALVMFVALSFSTDTFFTELNLLSLLRQISVIGIIAVGSTFVF-ISGEIDLSVGALH 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     L    G+ ++ +  V  ++      I G+ + K R                
Sbjct: 94  GLLAMVCAKLAINMGIDMYAVALVGVLLGATLSGINGVITTKLRIPSFITT--------- 144

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                        +    A  +   G  +  L               F+   +L M    
Sbjct: 145 ---------LGMLSIYSGATLVLSTGMPISGLQDPGFRSLVAGRAFGFIPAQVLWMVAAG 195

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L  T           N+ A  ++       K+ AF  S A +G++         
Sbjct: 196 IFGTYLLLFTRFGYNVFATGGNKAAAKAVGINTDRVKILAFVCSGALVGVSSFILLGWFR 255

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            + P      E  ++ +++I      GG  S+        I+  +      +    +   
Sbjct: 256 GVDPQTGNGLELSVIAAVIIGGTGLFGGQGSVLGTLVGALIIGMISNGTVLLGVDSYYEP 315

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 316 VAHGAVILLAVII 328


>gi|319652359|ref|ZP_08006476.1| hypothetical protein HMPREF1013_03089 [Bacillus sp. 2_A_57_CT2]
 gi|317396020|gb|EFV76741.1| hypothetical protein HMPREF1013_03089 [Bacillus sp. 2_A_57_CT2]
          Length = 289

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/309 (13%), Positives = 100/309 (32%), Gaps = 27/309 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL+++ G + +L+      +  GA+S   +       +  +   
Sbjct: 8   LVNGVSTGLLIFLLAAGLTLIFGLMSVLNFAHGGLFVWGAFSGAWIFKETNSFLLAIAGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+      ++         G+++    + +  +               +          
Sbjct: 68  AAVGVVLGWVLERFLIRPVYGNHVRQLLITLGGMLVL------------SESIKIFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        +    +I   +  +V++    L  ++ L L RT I    R    +++
Sbjct: 116 PIRVNLPAWLEGSYQFDGIIIIKYRVFVIVVGLLLYLALWLLLSRTQIGLMIRAGVLDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + GA  A     +  +M      I+   +VI+GGM
Sbjct: 176 MVQALGINVKGLFTFVFLLGAGLAALGGALLAPYSGVVFAEM-GMQYAILAFIVVIIGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL   A A+ I+                               L ++ L +V+L++   
Sbjct: 235 GSLQGSALASLIVGVAGAFMAYY--------------MPDLSLALNMLLLAIVLLVKPTG 280

Query: 339 LLRLRTPSN 347
           LL  +  + 
Sbjct: 281 LLGEKGSTV 289


>gi|293413003|ref|ZP_06655671.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291468650|gb|EFF11143.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 393

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 52/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KLS FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLSVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIIASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|291615595|ref|YP_003518337.1| XylH [Pantoea ananatis LMG 20103]
 gi|291150625|gb|ADD75209.1| XylH [Pantoea ananatis LMG 20103]
          Length = 396

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/363 (13%), Positives = 101/363 (27%), Gaps = 47/363 (12%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LR  +   +L  + ++     +   GA  S + + ++  Q  I  + A G+  V+ S   
Sbjct: 27  LRNLQVLVMLGAIVLIALFFTWTTDGAWLSPRNVSNLLRQTAITGILAVGMVFVIISA-E 85

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+      +   +  I     G  + L I V+ ++    G   G      +     + 
Sbjct: 86  IDLSVGSMMGLLGGAAAIFDVWLGWPLPLTIVVTLVLGLLLGTWNGWWIAYRKVPSFIVT 145

Query: 126 TLIM-----------------------------------------SEIFQNILIKWKPIT 144
              M                                         + +   IL +W+   
Sbjct: 146 LAGMLAFRGILVGITDGTTVAPTSPAMSQIGQSYLPGGIGFGFGFAGLALFILWQWRLRL 205

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
             +                             +     +   +L +  L    +    RT
Sbjct: 206 RRQQLGLAQPAATGTVARQAITAVLVLGAIWLLNDYRGVPTPVLLLALLMLVGMFMATRT 265

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
           A       I  N  A       +   KL+ FA++   + +AG   ++     SP     +
Sbjct: 266 AFGRRIYAIGGNIDAARLSGINVARTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIA 325

Query: 265 ENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           E   + + VI      GG+ S++       I+  +      M+   F   +       + 
Sbjct: 326 ELDAIAACVIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLA 385

Query: 320 HTT 322
              
Sbjct: 386 VWM 388


>gi|119383003|ref|YP_914059.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119372770|gb|ABL68363.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Paracoccus denitrificans PD1222]
          Length = 320

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 92/322 (28%), Gaps = 27/322 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           L +N  D       V+   +         +   + ++  Q  I    A G++ V+   G 
Sbjct: 13  LPINLRDAGTLFGLVLIFAVFAALNPVFLTGPNLINILQQSAINACIALGMTFVI-ISGG 71

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+       L          ++   A           L ++          
Sbjct: 72  IDLSVGPTAAVSVIVGATLMIAGVPIPLAVVAAIATGMACGLFNGTLVAIA--------- 122

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L  +       +       ++  G  +  +   FR   + ++  + +  
Sbjct: 123 ----------GLQPFIVTLGALSLYRALALIFTGGNPIFGIPTEFRQAINSLVLGVPVPV 172

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +++ +      ++L   R+ +      +  NQ+A       +   +++ + +S     +A
Sbjct: 173 IIVAVIAAVLWVVLN--RSPLGEYILAVGGNQEAARIAGVPVARTRITVYVLSGGLAAVA 230

Query: 246 GAFFAASRDRISPDMFKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G           P M    E        +    ++GG  S+        IL G+      
Sbjct: 231 GLILTGRLGAADPTMGNLWELDAIAAAAIGGASLMGGKGSVIGTLMGAVILGGLRNGLTL 290

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           MN   F  LL       +    
Sbjct: 291 MNVQAFYQLLATGIIILVAMLI 312


>gi|330898274|gb|EGH29693.1| inner-membrane translocator [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 312

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/297 (14%), Positives = 86/297 (28%), Gaps = 20/297 (6%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               + + +  M +Q+ I  + A G++ V+ + G + L+     A+ A     L      
Sbjct: 20  SFLLNSQRLVLMILQVSIIGLLAIGVTQVIITTG-IDLSSGSVLALSAMIAASLAQ---- 74

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                   S         +  LP        L +  L  +     I I   P      G+
Sbjct: 75  -------TSDFSRAVFPSLTDLPVWIPVVVGLGVGLLAGAINGSIIAITGIPPFIATLGM 127

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            V+ R      T    +       + +        + L +        + LR T      
Sbjct: 128 MVSARGLARFYTEGQPVSMLSDSYTAIGQGAMPVIIFLVVA---VIFHIALRYTKYGKYT 184

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N +A  +    +    +  ++++    G+AG   +A        M    E   + 
Sbjct: 185 YAIGGNMQAARTSGINVKRHLVIVYSIAGLLAGLAGVVASARAATGQAGMGMSYELDAIA 244

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + VI      GG+  ++       IL  +      +    +   +       +    
Sbjct: 245 AAVIGGTSLSGGVGRITGTVIGALILGVMASGFTFVGVDAYVQDIIKGLIIVVAVVI 301


>gi|300311563|ref|YP_003775655.1| branched-chain amino acid ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300074348|gb|ADJ63747.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 311

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 104/298 (34%), Gaps = 23/298 (7%)

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
           +++   +G+ +      Y +GAY          L  W  + ++ ++ G  G ++    L+
Sbjct: 26  TLIYSMMGVPNFAHASFYMLGAYVAY--AIAGVLGFWPALLIAPLVVGVAGALVEHYGLR 83

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
               Y  +  L+ +     ++++   +  G++ +         GT               
Sbjct: 84  IVHRYGHVPELLFTFGLSYLVVELVQLVWGRSPVPYRIPPALDGTLFTLYT--------- 134

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
             + ++  ++LL    +  ++ L LR T I    +    + +   +L   +    +  F 
Sbjct: 135 TAFPVYRGFMLLVAALMLLALWLLLRHTRIGLVIQAALTHPQMVEALGHNVPRVFMLVFG 194

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVE 296
              A   +AG         ++      +   I+  +V++GG+ SL+     + ++  +  
Sbjct: 195 GGCALAALAGVIGG--NAFVTEPGMAAAVGSIIFVVVVVGGLGSLAGAFITSLLIGMMQT 252

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT----------LMVIALFLVILMRSHSLLRLRT 344
               ++    +  L       +              L  + L +++++R   L+  R 
Sbjct: 253 FAVALDVSLASLGLSVAPDSALAPLLRLTLAQVAPVLPYLLLVVMLIVRPKGLMGQRE 310


>gi|218697284|ref|YP_002404951.1| D-xylose transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli 55989]
 gi|218354016|emb|CAV00514.1| D-xylose transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli 55989]
          Length = 393

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAENIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|121611011|ref|YP_998818.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121555651|gb|ABM59800.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 294

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 100/304 (32%), Gaps = 25/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S   Q  IY + A G  ++  +   +S        +GA+  + L +  G   WL +P 
Sbjct: 10  LISGISQGCIYGLMALGFVLIYKATETVSFAQGELMMLGAFCALALMTVAGFPFWLAVPA 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S    G  GM +    ++      A + ++++     +L              +   +  
Sbjct: 70  SIAAMGLFGMGLERAVIRPILGQPAFSIVMLTIGIGYVLRGLV---------TMIPVIGT 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +    +   F    ++       V+L    L A++    R + +  A +    NQ 
Sbjct: 121 ETHQLPVPYQDLSFRLGALVLSAGQLVVMLATGLLCAALFALFRYSKLGVAMQAAAQNQL 180

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A + +   +       +A+++A   +AG   A                +      ++GG 
Sbjct: 181 AAYYMGIPVQRLDGLVWALAAAVAAVAGLLLAPVTFV---HANMGLIGLKAFPAAVVGGF 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +SL        ++  V  L        F  +  F             I + +++++R + 
Sbjct: 238 SSLPGAIVGGLLIGIVESLSGFYLPEGFKDIAAF-------------IVVLVMLMLRPNG 284

Query: 339 LLRL 342
           L   
Sbjct: 285 LFGE 288


>gi|114766023|ref|ZP_01445035.1| ABC sugar (ribose) transporter, inner membrane subunit [Pelagibaca
           bermudensis HTCC2601]
 gi|114541741|gb|EAU44780.1| ABC sugar (ribose) transporter, inner membrane subunit [Roseovarius
           sp. HTCC2601]
          Length = 335

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 85/288 (29%), Gaps = 16/288 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   L+         S   I ++  +     + A G++ V+ + G L L+     A
Sbjct: 26  VVALIALILIGMALNSNFLSYANITNVLARSAFIGIIAVGMTFVI-TAGGLDLSVGSMAA 84

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             A   ++  +    S+ + +PV  +          +  +        +           
Sbjct: 85  FVAGLMILTMNTLTESMGVTLPVILLGVALALAAGLIAGIINGVLITRVGIEAFIVTLGT 144

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + I    IT    G  ++                             + + ++    ++ 
Sbjct: 145 MGIYRSLITWLADGGTLSLGFEMRELYRPVYY----------GGIAGISWPIIAFAVVAI 194

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              + +R TA       I  N++     +  ++  +L+ +A+    +G A   +      
Sbjct: 195 IGEIVMRHTAFGRHCAAIGSNERVARYSSIAVLKVRLATYALLGLLVGFAVVMYVPRLGS 254

Query: 256 ISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELC 298
            S       E   + +++I      GG   +        IL  +  + 
Sbjct: 255 ASASTGLLWELEAIAAVIIGGTLLKGGFGRVWGTVVGVLILSLIGNIL 302


>gi|260767512|ref|ZP_05876448.1| putative sugar ABC transport system permease protein YjfF [Vibrio
           furnissii CIP 102972]
 gi|260617412|gb|EEX42595.1| putative sugar ABC transport system permease protein YjfF [Vibrio
           furnissii CIP 102972]
          Length = 332

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/330 (12%), Positives = 89/330 (26%), Gaps = 22/330 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           L+ N    I   + ++          A  S + I ++        + A G++ V+   G 
Sbjct: 2   LKRNFPLFITISVFLLGYAFCMAEFPAFLSTRVICNILTDNAFLGILAVGMTFVI-LSGG 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A        L   +G   W+ I V+ ++    G +MG      +     + 
Sbjct: 61  IDLSVGSVVAFTGVLLATLIGDWGWHPWMAIGVALVMGALFGGLMGWVIDTLKIPAFIVT 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
              M                G + +     +       R L R            +    
Sbjct: 121 LAGMF------------FLRGVSFLISEQSIPIEHPLYRDLSRSAWHIIGGGRLSLMAVV 168

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +L+ +            RT   N    +  N  +   +   +    +  + +S+     A
Sbjct: 169 MLVVVALGMLLAH----RTRFGNNVYAVGGNPASAALMGVPVKRTTIGIYMLSTFLATCA 224

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G  F+       P      E   + ++VI      GG+ ++        I   +      
Sbjct: 225 GIVFSIYTSAGYPLAAVGVELDAIAAVVIGGTLLSGGVGTVFGSLFGVLIQGLIQTYITF 284

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
                                 L  + + +
Sbjct: 285 DGTLSSWWTKIIVGILLFSFIALQRLLIIM 314


>gi|260574305|ref|ZP_05842310.1| Monosaccharide-transporting ATPase [Rhodobacter sp. SW2]
 gi|259023771|gb|EEW27062.1| Monosaccharide-transporting ATPase [Rhodobacter sp. SW2]
          Length = 345

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/266 (10%), Positives = 71/266 (26%), Gaps = 14/266 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++             S      +   + +    A G++ V+   G + L+      
Sbjct: 20  FVALILVLGFFSFAAPNFLSAANAVIVSKHVALNAFLAIGMTFVI-ITGGIDLSVGSIVG 78

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSA----MISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           + A     L        +           +       +            L +A  I + 
Sbjct: 79  LCAMVAGWLVLNGVDPGFGWAVWFNTYEIVGIVVLVGVAVGFINGLLITRLNVAPFIATL 138

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
               I      +++G           F   +         FP     + + +  ++  + 
Sbjct: 139 GTLYIARGAALLSSGGR--------TFPNLSGNPDYGTQSFPLLGAGHFLGLPLMIWMLV 190

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +  +     RRT +      +  N++        +   K+  +  S     + G   A+
Sbjct: 191 VVGLAAHYISRRTPLGRHIYAVGGNERGAALSGVKVNRIKMFVYMFSGFCAAIVGLIIAS 250

Query: 252 SRDRISPDMFKFSENIIVISIVILGG 277
                S      +  +  I+  +LGG
Sbjct: 251 QLQ-ASHPATGETFELNAIAAAVLGG 275


>gi|167841868|ref|ZP_02468552.1| inner-membrane translocator [Burkholderia thailandensis MSMB43]
          Length = 351

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/318 (12%), Positives = 93/318 (29%), Gaps = 12/318 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L+ +   +   L   A  +   + S+   + I  +   G++I +   G   L+     
Sbjct: 34  ILLVLIFLVIGFALREPAFLNVDNLFSILQSVSIVALLGIGVTITLA-AGGFDLSVGSVA 92

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A    +   +   +  S    +     +  A G+  G+   + R     +ATL    +  
Sbjct: 93  ATAQMAASYVLVVWHGSTLAAVIACVTLGVAAGLFNGVLITRLR-VPDQLATLGTLFLMA 151

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +      +   G  + D      T    +          +     +   +L +  ++
Sbjct: 152 GLQLIPTGGRSLATGSVLPDG-----TDATGVFPDAFLALGRLRVFDVVPLPVLLLAAVT 206

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR- 253
           A+  + +  T        I  N+ A           + +A+ VS A   + G   AA   
Sbjct: 207 AATCVAMEATRWGRVIYAIGGNETAARLAGAPAARYRGAAYVVSGAIASLGGVLIAARVG 266

Query: 254 ---DRISPDMFKFSENIIVISIVILGGMT-SLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                    +   +    +I   + G    ++         +  ++     +N  Y+   
Sbjct: 267 RGDVSAGHSLLLDAVAAALIGYAVWGAKRPNVFGTVVGAVFVGVLLNGLTMLNAPYYMQD 326

Query: 310 LKFDCSFNMRHTTLMVIA 327
                   +       I 
Sbjct: 327 FIKGALLVLALAFTFGIG 344


>gi|29832708|ref|NP_827342.1| branched-chain amino acid ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
 gi|29609828|dbj|BAC73877.1| putative branched-chain amino acid ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
          Length = 296

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 89/307 (28%), Gaps = 21/307 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G  I+  +  +++        +G Y   +L  R G +  L + V
Sbjct: 8   VLNGLALGSVYALVALGFVIIFKASAVMNFAHGSLLLLGGYLTAVLHDRLGFAGALALAV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A  + A  +   L   +       + T++   +   ++        G            
Sbjct: 68  LATAAAAGLI-DWLLLRRLDPHAAHVLTILTIGVDILLMTDLTRRIGG------------ 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              T+             +         +L    + A++    R T+   + R   ++ +
Sbjct: 115 DLLTLGDPWGSDVTELGPITVADSRIASILVSLVVIAAVFAVFRFTSWGLSLRAAAEDHE 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +   +  A    +  +    A F A+      +       +      ILGGM
Sbjct: 175 AAALMGIRLARIRTLA-WCLAGALAALAAVFLAAFPAPGLERTTGQIALKAFPAAILGGM 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S       + ++     L  G           F               + LV+L+R   
Sbjct: 234 ASPPGALAGSLLIGVTEALAAGYQSELSALGEGFGDVVP-------YAVMVLVLLVRPAG 286

Query: 339 LLRLRTP 345
           L   R  
Sbjct: 287 LFGTREA 293


>gi|260773745|ref|ZP_05882660.1| ribose/xylose/arabinose/galactoside ABC-type transport systems
           permease component 2 [Vibrio metschnikovii CIP 69.14]
 gi|260610706|gb|EEX35910.1| ribose/xylose/arabinose/galactoside ABC-type transport systems
           permease component 2 [Vibrio metschnikovii CIP 69.14]
          Length = 332

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 93/309 (30%), Gaps = 18/309 (5%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
             L ++ V+    L        +   +  M +   I  + A GL  VV   G + ++   
Sbjct: 18  FYLSMMIVLIVGALTATSEDFLTLGNLFDMSVSSAILGIMACGL-FVVLIAGGIDISFPA 76

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
             AI  Y         G +  L   ++ M+    GMI  +   K +          +   
Sbjct: 77  TAAIAQYVMATYLLTLGGNFMLAFAIATMVGILLGMINAILVYKLKVP-------AIIIT 129

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
              + + +  +     G ++     +    +          +    Y+  +   +L +  
Sbjct: 130 ISTLNVFFGLLIYVSNGEWLYGFPDWFMDGIELFTF-----TGSDGYDYGLSLPILTLIV 184

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +  +    + +T +      +  N  A   +   +    L  +    A  G+A       
Sbjct: 185 MVLATSFLMTKTRLGRQIYAVGGNADAASRIGINLFGIHLFVYGYMGALAGIASVVQTQI 244

Query: 253 RDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
              ++P+     E  ++ ++V     + GG  +L  +     +L  V      +    + 
Sbjct: 245 TQSVAPNSLMGFELTVLAAVVLGGTSMTGGKGTLMGVILGVILLAIVKNGLTILGVPSYW 304

Query: 308 SLLKFDCSF 316
             +      
Sbjct: 305 HTVVTGLII 313


>gi|258653589|ref|YP_003202745.1| inner-membrane translocator [Nakamurella multipartita DSM 44233]
 gi|258556814|gb|ACV79756.1| inner-membrane translocator [Nakamurella multipartita DSM 44233]
          Length = 343

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/321 (14%), Positives = 102/321 (31%), Gaps = 19/321 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +    +  L V+  +   L      +   + ++  Q    ++   G ++V+  +G + L+
Sbjct: 30  RSLGEVGALVVLIVVFAALNPSTFLTIDNVRTILDQSATPLIVGVGATLVI-LMGSIDLS 88

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                  G  ++++       S  L      +      ++  L         L + T I+
Sbjct: 89  VEGLMGAGGMAFILATENSRGSTDLGAAAFVIGILVGALLGMLA--GLIHTRLKVPTFIV 146

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +  F  I +    +  G   I +                     +      + + +    
Sbjct: 147 TIGFWFIGLGIATVLFGTDSIPLLP--------------DGGLKTWPNTVFLGLPFSFWL 192

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              + A   +  R T +      I +N++   S   ++   K+  FA + A  G+AG   
Sbjct: 193 AGLIVALGWVITRYTKLGRFTYAIGNNEEVARSNGVSVSRIKVFVFAFAGACSGLAGILA 252

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                  SP +      + V ++VI  G TSLS         +  V +   +N     S 
Sbjct: 253 TLRLGAGSPTVGGGILFVTVAAVVI--GGTSLSGGKGGVLRTMLGVMILTVLNNGLILSG 310

Query: 310 LKFDCSFNMRHTTLMVIALFL 330
           +       +    L+V  +  
Sbjct: 311 VSSSIQSGVSGAILIVAIIVA 331


>gi|297197854|ref|ZP_06915251.1| ribose/xylose/arabinose/galactoside ABC-type transporter permease
           [Streptomyces sviceus ATCC 29083]
 gi|197716499|gb|EDY60533.1| ribose/xylose/arabinose/galactoside ABC-type transporter permease
           [Streptomyces sviceus ATCC 29083]
          Length = 339

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/314 (12%), Positives = 89/314 (28%), Gaps = 28/314 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  VV  + +        +   +  MG  +    + A G S+V+   G + L+     
Sbjct: 35  VIIACVVVFVAIAANAETYTAVGNLQVMGRDLSQVGILAIGESLVI-LTGGIDLSVGALA 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       +    GL   L I ++ +I+ A G+  G+   +       I  +  +    
Sbjct: 94  GLAGILAAWMNVNEGLPAPLAILLTLVITAAVGLWHGVMVTRLNVPPFVITLVTYTV--- 150

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                         G  +A         +  L           +    +++V        
Sbjct: 151 ------------AQGTALAITSGSPINNLDPLFSSLSQYYVGEVPVPALFFVGAAAVAWF 198

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                   RT +      +  N++A             S +  S+   G+ G        
Sbjct: 199 VL-----ERTYVGRQIYAVGGNKEAARLAGIPTGRRITSTYVASAVLAGVVGVLVIGR-M 252

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            ++         +  I+  ++GGM        ++ IA    +L  +      +    ++ 
Sbjct: 253 NVADPSVGAGWELTAIAAAVVGGMSLSGGEGRIAGIAAGAILLEFITNGLLALKVSPYDQ 312

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 313 QVVQGAVLGVAILL 326


>gi|146313170|ref|YP_001178244.1| inner-membrane translocator [Enterobacter sp. 638]
 gi|209573017|sp|A4WER3|LSRC_ENT38 RecName: Full=Autoinducer 2 import system permease protein lsrC;
           Short=AI-2 import system permease protein lsrC
 gi|145320046|gb|ABP62193.1| autoinducer 2 ABC transporter membrane protein [Enterobacter sp.
           638]
          Length = 343

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 42/130 (32%), Gaps = 5/130 (3%)

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + + + FL       L RT     +  + DN  A   L   +   ++ AF ++      A
Sbjct: 161 LGMAVLFLVLIGAWTLSRTVSGRDFYAVGDNLAAARQLGVAVNRTRMLAFTINGMLAACA 220

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCG 300
           G  FA+    +        E   + + V     +LGG  +L         L  +  +   
Sbjct: 221 GIVFASQIGFVPNQTGSGLEMKAIAACVLGGISLLGGTGTLIGAFLGAFFLTQIDTVLVL 280

Query: 301 MNFYYFNSLL 310
                + +  
Sbjct: 281 FRLPAWWNDF 290


>gi|304397726|ref|ZP_07379603.1| inner-membrane translocator [Pantoea sp. aB]
 gi|304354898|gb|EFM19268.1| inner-membrane translocator [Pantoea sp. aB]
          Length = 338

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 93/306 (30%), Gaps = 27/306 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
             +  +     + A G+++V+   G + L+     AI   +   L        ++++   
Sbjct: 57  IDILNRAAPVALLAIGMTLVIA-TGGIDLSVGAVMAIAGATAATLTVAGHGVPFIILCTL 115

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           A                     L    L+     Q  +     +  G+    +  +   +
Sbjct: 116 ATGLACG---------------LWNGVLVALLRIQPFVATLILMVAGRGIAQLITQGQIV 160

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                SL  F       +   +++  V+        ++ L  R+TA+      +  N +A
Sbjct: 161 TFDSDSLGWFGNGSLWMLPVPVWITLVVA------LAVWLLTRKTALGLFIEAVGINLRA 214

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +   T     +S +A+S     +AG   AA       +       +  I  V++GG  
Sbjct: 215 ARNAGVTGWLVVMSTYAISGVCAAVAGLIVAADIRGADANNAGLWLELDAILAVVIGGA- 273

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
                       + +  +   +       +L       +      V+ + +++L     +
Sbjct: 274 ----SLMGGRFNLVLSLIGALIIQSMNTGILLSGFPPELNQVVKAVVVMCVLLLQSPRFI 329

Query: 340 LRLRTP 345
             L+  
Sbjct: 330 AMLKRR 335


>gi|299530827|ref|ZP_07044242.1| inner-membrane translocator [Comamonas testosteroni S44]
 gi|298721343|gb|EFI62285.1| inner-membrane translocator [Comamonas testosteroni S44]
          Length = 280

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 79/299 (26%), Gaps = 22/299 (7%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           +   +Y + A GL++  G   +++L+        A+      S +G+S  LL+ +   + 
Sbjct: 1   MLGGLYGLVAMGLTLQYGVARIMNLSYGEFLIAPAFLAFFAVSSWGISPLLLVLLVVPLG 60

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
                ++    L            +  +           +            + F G   
Sbjct: 61  FVIQWLIYQLLLTPLVRRAKGGPALEVDSILATFGMLFVVQG-------VMLVMFGGDYH 113

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                                 VL     L   + L L RT      R +    +    +
Sbjct: 114 SYSYLADPVEILGSKVAANRLLVLGFAIVLGGGLYLLLTRTRTGAVVRAVSVAPQFAHLV 173

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
              +      A+ +  A + + G   +                +  + +VI+GG+ +L  
Sbjct: 174 GINVRSTAALAYGLGGALVAVCGVLVSMFLPF--SAGMGTMFAMKALIVVIMGGVGNLMG 231

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              A  +L     L            +                   LV+L +   L   
Sbjct: 232 CLVAGMLLGFAETLVASFVDPGLTLAVN-------------YAVFLLVLLFKPTGLFGR 277


>gi|307727378|ref|YP_003910591.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|307587903|gb|ADN61300.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
          Length = 326

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 101/314 (32%), Gaps = 27/314 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++ V   +   LF     S +  +    Q++  V+   G+++VV   G + L+   + A
Sbjct: 28  IVVLVAMIVFNLLFTQHFVSLQTFNVNLTQVVTIVIVGIGMTLVVA-TGGIDLSVGASMA 86

Query: 76  I-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           I GA + ++  +  G +  +L     +I+ A   +     +        +ATL++     
Sbjct: 87  IAGALAPMLFMNIAGPAGIVLAFTLPIIAAALCGVFNGLLVTRLRVQPIVATLVLFI--- 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                        AG  +A  +        +   F       V    F   ++L +    
Sbjct: 144 -------------AGRGIAQVVTDGSLQAFTNPTFQWIALGKVAGVPFQILLMLALV--- 187

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 +R+T           N+ A +         K+ A+ V +A  G+AG    +   
Sbjct: 188 VVFAWIVRKTLFGKYLLVTGGNEDAAYLSGIPTARVKMIAYTVCAALAGLAGLISISVNS 247

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
               ++      +  I+ V +GG        S++       I+  +             +
Sbjct: 248 SSDANVIGLGVELDAIAAVAVGGTALTGGKASITGTLIGALIIQLLRYTLLAHGIPDAAA 307

Query: 309 LLKFDCSFNMRHTT 322
           L+       +    
Sbjct: 308 LVLKAAIIIVAVYV 321


>gi|118470725|ref|YP_887559.1| branched-chain amino acid ABC transporter permease [Mycobacterium
           smegmatis str. MC2 155]
 gi|118172012|gb|ABK72908.1| ABC transporter branched chain amino acid transport permease
           [Mycobacterium smegmatis str. MC2 155]
          Length = 345

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 84/305 (27%), Gaps = 17/305 (5%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL--------------- 84
                   IY + A G ++V G L L++      + +G +                    
Sbjct: 32  IDGLSWGAIYALVAVGYTLVFGVLRLINFAHSEIFMLGMFGAYFCLDVILGFTPSGNAYN 91

Query: 85  --GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
                  L + + +  + ++SG+  + +   + +      A A   +        +  + 
Sbjct: 92  KGIGLTVLYLGIAMLFAMLVSGSAAIGLEFIAYRPLRKRNARALTFLITAIGMSFVLQEF 151

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
           +      +            +  +    +F             +++    L+    + L 
Sbjct: 152 VHFVLPKLMKGYGGSNAQQPITLVQPKAQFTVFGATVSNVTLVIVVSALILALLTDIALN 211

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
           RT      R +  +      +  +     ++ F +     G A   +     +       
Sbjct: 212 RTKFGRGIRAVAQDPTTATLMGVSRERIIMTTFLIGGLLAGAAALLYTLKVPQGIIYSGG 271

Query: 263 FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           F   I   S  +LGG+ +L        +L  +      +    +  ++ F     +    
Sbjct: 272 FLLGIKAFSAAVLGGIGNLRGALLGGLLLGIMENYGQAVFGTQWRDVVAFVLLVLVLLFR 331

Query: 323 LMVIA 327
              I 
Sbjct: 332 PTGIL 336


>gi|90414345|ref|ZP_01222323.1| putative permease of ABC transporter [Photobacterium profundum
           3TCK]
 gi|90324569|gb|EAS41121.1| putative permease of ABC transporter [Photobacterium profundum
           3TCK]
          Length = 332

 Score = 52.6 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/314 (13%), Positives = 94/314 (29%), Gaps = 18/314 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + +++  L  L  +  + L +      +   I  M +   I  + A GL  VV   G + 
Sbjct: 13  IKRHEFYLAALIGLMVVGLGISSEDFLTLGNIFDMSVSSAILGIMACGL-FVVLIAGGID 71

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++     AI  Y         G + ++   ++A +    G+I  +   K +      A +
Sbjct: 72  ISFPATAAIAQYVMATYVLSIGGNFFIAFLIAAAVGMLLGLINAVLVYKLKVP----AII 127

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I               +NG       D                        Y+  +   +
Sbjct: 128 ITISTLNLFFGLLIYFSNGAWLYGFPDWFMDGVEWFT--------FVGSDGYDYGLSLPI 179

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +  +       + +T +      +  N  A   +   +    L  +    A  G+A  
Sbjct: 180 ITLVAVVLFTSFLMSKTRLGRQIYAMGGNADAASRIGINLFGIHLFVYGYMGALAGIASV 239

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
                   ++P+     E  ++ ++V     + GG  +L  +    A+L  +      + 
Sbjct: 240 VQTQITQSVAPNSLMGFELTVLAAVVLGGTSMTGGKGTLMGVVLGVALLAIMKNGLTLLG 299

Query: 303 FYYFNSLLKFDCSF 316
              +   +      
Sbjct: 300 VPSYWHAVVTGLII 313


>gi|330820990|ref|YP_004349852.1| ABC transporter permease protein [Burkholderia gladioli BSR3]
 gi|327372985|gb|AEA64340.1| ABC transporter permease protein [Burkholderia gladioli BSR3]
          Length = 339

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/311 (15%), Positives = 97/311 (31%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  L   L      S + I  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 41  VLVLLCLGFGLLTDGFASWQNISIVAQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 99

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +LGS      WL +P++  +    G++ G      R     +    ++       
Sbjct: 100 A-VASLLGSNIAGWGWLGVPIALAVGLVFGLVNGSLIAFLRLPPFIVTLGALT------A 152

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           ++      G        +L               F        + + ++++    + A+ 
Sbjct: 153 VRGVARLLGNDSTIFNPQLP--------------FAFIGNGAILGVPWLVVIALVVVAAA 198

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N++A       +   +L  +  S    G+     AA     +
Sbjct: 199 WFILRRTVLGMRIYSVGGNREAARLSGINVRAIELFVYGASGLLAGLGALMSAARLYAAN 258

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 259 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLSNGLVLLGVSDIWQYII 318

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 319 KGLVIIGAVAL 329


>gi|325962582|ref|YP_004240488.1| hypothetical protein Asphe3_11720 [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323468669|gb|ADX72354.1| uncharacterized ABC-type transport system, permease component
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 440

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/332 (13%), Positives = 93/332 (28%), Gaps = 15/332 (4%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL-- 63
           L+         L      L +  FL          S+ +  LI       + +V GSL  
Sbjct: 100 LKTKDRPAPGWLTVAFIVLFVAAFLIWVVGGARTPSISLAGLIAGSVTLAVPLVFGSLSG 159

Query: 64  ------GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
                 G++++        GA++  I+ S        L+  +   +    ++        
Sbjct: 160 VLCERVGVVNIAIEGQLLGGAFTAAIVASMTQNPFIGLLAAAVAGAVVSMVLALFSIKYL 219

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
               +    L +        +    +   KA       L  +   V S I          
Sbjct: 220 VNQIIVGVVLNVLVSGVTGFLFSTVMQANKAQFNSPPGLDIIEIPVLSSIPVIGPILFRQ 279

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
               ++ YV + + ++         +T      R + ++ +A  +L   +   +     +
Sbjct: 280 SLVGYLMYVAVLVVWVGLF------KTRWGLRVRAVGEHPQAADTLGINVNATRFWNVTL 333

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
             A  G+ G+FF                  I ++ +I  G  +      A  +      L
Sbjct: 334 GGAVAGIGGSFFTLVAIDSFTKEISGGRGFIALAALIF-GRWNPIGAFFAALLFGFADNL 392

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
              +         +F        T L V  L 
Sbjct: 393 QSIVTIIGTPVPSQFMAMLPYLVTVLAVAGLV 424


>gi|301020263|ref|ZP_07184381.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 69-1]
 gi|300398840|gb|EFJ82378.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 69-1]
          Length = 393

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLMLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|268679117|ref|YP_003303548.1| inner-membrane translocator [Sulfurospirillum deleyianum DSM 6946]
 gi|268617148|gb|ACZ11513.1| inner-membrane translocator [Sulfurospirillum deleyianum DSM 6946]
          Length = 294

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 79/269 (29%), Gaps = 11/269 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G ++V G L L++        +G +         GL     + +
Sbjct: 6   MVNGFSLGSMYALIAIGYTMVYGVLRLINFAHGDIMMVGGFLGFFGIEVLGLPFAAAVLL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   GM     + +   +   I+ LI +      L     +  G          Y 
Sbjct: 66  AIVGAALLGMASDRVAYRPLREAPKISLLITAIGVSFFLENAFNVFFGGVPRAFPVPAYL 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             ++  +    V L    L   I+  L +T    A R +  +  
Sbjct: 126 EVM----------VEFFGLMMPMSAVIVPLLTAILLGIILWILFKTKYGMAIRALAFDVG 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +           F + SA   + G F+A +   +   M      +   +  ++GG+
Sbjct: 176 TVNLMGIDANRVITLVFGMGSALAAVGGIFWAVNYPSVE-PMMGVLVGLKAFAAAVVGGI 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFN 307
            S+        I+     +          
Sbjct: 235 GSVGGAVLGGLIIGFTEVVVVAFFPELGG 263


>gi|288931423|ref|YP_003435483.1| branched-chain amino acid ABC transporter permease [Ferroglobus
           placidus DSM 10642]
 gi|288893671|gb|ADC65208.1| inner-membrane translocator [Ferroglobus placidus DSM 10642]
          Length = 285

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 95/306 (31%), Gaps = 29/306 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   ++ + + G +++ G   +L+      + + AY  +            +I  
Sbjct: 9   LIYGAVISGMWALVSSGFTLIFGVSRILNFAHGTFFVLAAYFAITFYKSGLNLYLSVILG 68

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +I      I        R   + +  +I++     +  +   +T G+ G+ +   +  
Sbjct: 69  VLLIGALAVAIYRFLLAPIREHEVMV--IIVTLALALLFEQIILLTYGEHGVSLPSFVGG 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +                 V          +    +   + +++ +T           N +
Sbjct: 127 VVRIYD------------VPVTYKRILAFVFSIAILVILEIFINKTRTGKMISAASQNYE 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +         VS+   G AG F+A  +   +         I   +IVILGG+
Sbjct: 175 GAMLIGINVERIFTVTMFVSAILAGFAGIFYA--QIFSANPFAAIKSLIFAFAIVILGGL 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A+ I+  V+          +                ++++ +  V++ +   
Sbjct: 233 GSVKGSIVASFIVGYVLATTIVFLGARWAE-------------FVVMLLIIAVLIFKPTG 279

Query: 339 LLRLRT 344
           L  +  
Sbjct: 280 LFGVEE 285


>gi|182679734|ref|YP_001833880.1| monosaccharide-transporting ATPase [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182635617|gb|ACB96391.1| Monosaccharide-transporting ATPase [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 338

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 95/308 (30%), Gaps = 26/308 (8%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSI 58
            +R       +  + V   L+          Q ++ +      M +Q+ +  + A G++ 
Sbjct: 16  PVRRLPAGMSILFVLVAIALIFEALGWLLVGQSFLMNTQRLTIMILQVSVIGIIAVGVTQ 75

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           V+   G + L+     A+ A                              +  LP++   
Sbjct: 76  VI-ITGGIDLSSGSVVAMTAMIAASFAQSSTW-----------ARAVYPSLTDLPAIVPI 123

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
           G  + I  +        I     P      G+ V+ R      T    +       + + 
Sbjct: 124 GIGIGIGLIAGLINGMLITYTKIPPFIATLGMMVSARGVARWYTNGQPVSGLEKSFTVIG 183

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
             I+   + L +  +   ++ + R    +     I  N +A       +    +  +A++
Sbjct: 184 SGIWPVVIFLVVAAIFHVVLRYTRYGKFTY---AIGANVQAARVSGINVERHLIKVYAIA 240

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIG 293
            A  G+AG   AA       +M    E   + + VI     +GG   +      TAIL  
Sbjct: 241 GALAGVAGLVTAARAQTAQANMGINYELDAIAATVIGGTSLVGGSGRILGTIIGTAILGV 300

Query: 294 VVELCCGM 301
           +      +
Sbjct: 301 MTSGFTFL 308


>gi|311105751|ref|YP_003978604.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310760440|gb|ADP15889.1| inner-membrane translocator 30 [Achromobacter xylosoxidans A8]
          Length = 285

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/295 (16%), Positives = 98/295 (33%), Gaps = 27/295 (9%)

Query: 53  AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGL 112
           A GL+++ G LG+++      Y +GAY           S    + V+ +  G  G+ M  
Sbjct: 18  ASGLTLIFGMLGVINFAHGALYMLGAYL-AFDIQLRTGSFIAGLVVATVGVGLVGVAMER 76

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
            +L+   +      LI++  F  ++ +      G             GT           
Sbjct: 77  LALRPLYNRPHFYQLILTFGFILVISEAVKFVWGLGYQETPMPALLAGT----------V 126

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
             +     ++  +V+     +SA++   L ++      R    + +    L       + 
Sbjct: 127 ELAGSTIPVYRLFVIAFGLAVSAALFFVLEKSTFGMLVRAASSDGEMVRILGLPAAAIRS 186

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
           + F V +A  G+AGA  A             +  I    +VILGG+ ++  +  A+ ++ 
Sbjct: 187 AVFGVGAALAGLAGAISAPLFPI--ELGMATNTIIDCFIVVILGGLGNIRGVVAASLLIG 244

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSN 347
            V  +       + +               L    L   +L R   L   +    
Sbjct: 245 MVRAVGYTFMPSWVD--------------ILTFAMLIATLLTRPQGLFSRQARLA 285


>gi|295677531|ref|YP_003606055.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295437374|gb|ADG16544.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 335

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/278 (11%), Positives = 73/278 (26%), Gaps = 27/278 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++  +++     +  S   I+++  Q+ I  + A G++ V+   G + L+     A
Sbjct: 40  FIGLLMVCIVMVFASDSFLSAANIENVLRQVSINAIIAVGMTCVI-LTGGIDLSVGSVMA 98

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +                        + +G     M   +    G  + +     +  F  
Sbjct: 99  LAG---------------------TLSAGLMVAGMNAVAALAVGLAVGLGFGAANGFFVA 137

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  I                                     + +   ++ M  +  
Sbjct: 138 FAGMPPIIVTLATMGIARGLALIYTGGYPIDGLPDWVSFFGSGKILGIQAPVVIMAVIYV 197

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              + L R         I  N++A       +   KL  + ++      A     A    
Sbjct: 198 IAWVLLERMPFGRYVYAIGGNEQATRLSGVRVARVKLIVYTIAGLTSAFAAIVLTARLMS 257

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKAT 288
             P+     E   + ++V     I GG  S+       
Sbjct: 258 GQPNAGVGFELDAIAAVVMGGTSISGGRGSIIGTLIGA 295


>gi|120404964|ref|YP_954793.1| inner-membrane translocator [Mycobacterium vanbaalenii PYR-1]
 gi|119957782|gb|ABM14787.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 352

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 93/284 (32%), Gaps = 13/284 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             + A+   +   +     +    + ++        + A G+++++   G   L+  +A 
Sbjct: 37  AGIGAIGIFVFFLVVAAPFREASSLATVLYASSTIGIMACGVAVLM-IGGEFDLSAGVAV 95

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              + +  +L     L++W+   ++ ++S   G   G   ++ +     I       +  
Sbjct: 96  TFSSLAASMLAYNLHLNLWVGALLALILSLTVGFFNGFLVMRTKIPSFLITLSTFFMLAG 155

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L   K +    A   V+D   +             F SSF ++ + +   ++     +
Sbjct: 156 INLAVTKLVAGQVATQSVSDMQGWDSAQ-------KVFASSFTLFGVSIRITVVWWLVFT 208

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     L +T I N    +  +  +  ++   +   K+  F          G     + +
Sbjct: 209 AIATWVLFKTKIGNWIFAVGGDADSARAVGVPVTKVKIGLFMFVGFCAWFVGMHLLFAFN 268

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIG 293
            +       +E   +I+ VI      GG  +    A    I   
Sbjct: 269 TVQSGQGIGNEFFYIIAAVIGGCLLTGGYGTAVGAAIGAFIFGM 312


>gi|311109567|ref|YP_003982420.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310764256|gb|ADP19705.1| inner-membrane translocator 70 [Achromobacter xylosoxidans A8]
          Length = 307

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 79/310 (25%), Gaps = 21/310 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY--SYVILGSRYGLSIWLLI 96
           + S       Y + A G SI   +   L+       ++GA+     +             
Sbjct: 9   LVSGLAVGGAYALVALGFSITFTTTRTLNFGHGEFVSVGAFIGVGALFLLAGKPVTTAAF 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A+      +      L      + +    +        + W   T G   +  +   
Sbjct: 69  TGLALSGWEYLLAGLAAVLVMGLLGVLLYVFGVRPFASRPGMAWVMSTLGFGILLQSAAF 128

Query: 157 YFLGTTVRSLIRFFR---FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
              G    ++   F                  +L     +       + RT +  A R +
Sbjct: 129 AVWGPAPVTVPAPFGDEVIRVFGAGVRSQELLLLAVAVAVMVLFDRIMNRTMLGKAMRAV 188

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             N      +   +      AF  SSA  G+AG   A                    ++ 
Sbjct: 189 AANPAVANLMGINVNAVMTGAFFASSALAGLAGFLVAPITSASIFMGLAIGLKGFSGAM- 247

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
            +GG+++         +L  +                  +   +      +   + LV+ 
Sbjct: 248 -IGGLSNPRGCVLGGFVLGLLESYV--------------NLWQSQWREVAIFGLVILVLA 292

Query: 334 MRSHSLLRLR 343
           +R   L   R
Sbjct: 293 VRPTGLFGKR 302


>gi|306816078|ref|ZP_07450216.1| D-xylose transporter subunit ; membrane component of ABC
           superfamily protein [Escherichia coli NC101]
 gi|305850474|gb|EFM50931.1| D-xylose transporter subunit ; membrane component of ABC
           superfamily protein [Escherichia coli NC101]
          Length = 393

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGTLGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|304393395|ref|ZP_07375323.1| inner-membrane translocator [Ahrensia sp. R2A130]
 gi|303294402|gb|EFL88774.1| inner-membrane translocator [Ahrensia sp. R2A130]
          Length = 318

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 98/301 (32%), Gaps = 17/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y + A G  ++  + G+ +    I     A + V L      +   +I    ++
Sbjct: 30  FVSGVLYALIALGFVLIYKASGVFNFAQGIMVVFAALALVSLHEVGVPAWLAVILTLGIM 89

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +     +  +   K    + AI  +    +   +    + I  G+        +      
Sbjct: 90  ALLAIGVERIVLRKLVNQHDAILLMATIGLTLFLEGLGETIFGGE-----PKSMITEELG 144

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           + + +  +      V ++      ++    + A + L+   + I  A R + D+ +A  S
Sbjct: 145 LPTGVSDWEVFGGLVSFQHIDIAAVVIAVIMVAGLALFFNYSRIGRALRAVADDHQAALS 204

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +  ++       +  +     + G  + A               +  ++++ILGG TS+ 
Sbjct: 205 VGISLNQIWAIVWFAAGVVALVTGIMWGARS---DVSFALEVIALKALAVLILGGFTSIP 261

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  I+    ++        F   ++   +          +   + +L R   L   
Sbjct: 262 GAIVGGLIIGIGEKVFEVYWGAIFGGGVEAWFA---------YVLALIFLLFRPQGLFGE 312

Query: 343 R 343
           +
Sbjct: 313 K 313


>gi|293390424|ref|ZP_06634758.1| monosaccharide-transporting ATPase [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290950958|gb|EFE01077.1| monosaccharide-transporting ATPase [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 317

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/301 (9%), Positives = 88/301 (29%), Gaps = 26/301 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           + +    S + + S+  Q+ ++ + A G++ ++ + G + L+     A+ A     + + 
Sbjct: 28  VSIDGFFSARTVWSIVEQVSMFGIIAIGVTFIIITTG-IDLSSGSVVALTAVVSASVVTG 86

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                  L+  +  I    G+             L    L         +     +   +
Sbjct: 87  GDTFFAALLAFAVSILIGAGLG------------LINGGLTAIGSIPPFIATLGMMIIAR 134

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
               +      +  +  +           +   + +Y +++ +        + L R+   
Sbjct: 135 GAAQLYSDGRPIDASSEAFTWIADVNILGLPGLVLLYILIVIVS------HILLSRSTFG 188

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N  A            +  + +  A  G+AGA  AA         +  +  +
Sbjct: 189 RHVYAVGGNLNAAKICGINTNRTLIWVYVLGGALSGLAGALLAART-YAGNPSYGLAWEL 247

Query: 268 IVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             I+  ++GG+       ++        I+    +    +    +   +       +   
Sbjct: 248 DAIAAAVIGGVSLSGGFGTIPMCVIGALIIGTTNKGLNMLGVDPYWQQIVKGAIIVVAVL 307

Query: 322 T 322
            
Sbjct: 308 L 308


>gi|194288818|ref|YP_002004725.1| branched-chain amino acid ABC transporter permease [Cupriavidus
           taiwanensis LMG 19424]
 gi|193222653|emb|CAQ68656.1| putative branched-chain amino acid transport system permease,
           membrane component [Cupriavidus taiwanensis LMG 19424]
          Length = 295

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/306 (9%), Positives = 83/306 (27%), Gaps = 28/306 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS--YVILGSRYGLSIWLLI 96
           + S      +Y +   G+SI+     +++        IGA    + +        + +  
Sbjct: 10  VLSGITNGFVYALIGVGISIIFKGTRIVNAMQGEFAVIGALVAVFALKSLGLPYPVAIAG 69

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++A  +    +         R      + L+++      L        G+         
Sbjct: 70  GIAAGAASGLAIDTLFVRPMMRRGAGEESFLLLTIGLAFALSAAALYFGGRDSHL----- 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + ++              +    ++     L A++ L+  +T +  A      +
Sbjct: 125 ------LPAIGGEGVVELLGATAPVHALALVGIAVLLVAALRLFYTKTLVGLAMTAASLD 178

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                +    +   +   F +   F  +AG                    +   +  ILG
Sbjct: 179 PDGATTTGINVRRMRTLTFLLGGGFGAVAGVLVTPLLSM--NYQMGIGLTLKGFAAAILG 236

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +         +L     L        +  ++                 L +++++  
Sbjct: 237 GLGNPLGAVVGGLLLGLTESLAVVGFPSGYRDVVALS-------------ILVVIMILLP 283

Query: 337 HSLLRL 342
           + +L  
Sbjct: 284 NGVLGR 289


>gi|162456039|ref|YP_001618406.1| ABC transporter permease [Sorangium cellulosum 'So ce 56']
 gi|161166621|emb|CAN97926.1| similar to ABC transporter (permease proteins) [Sorangium
           cellulosum 'So ce 56']
          Length = 372

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 93/303 (30%), Gaps = 3/303 (0%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +  GA  S + +    +    Y++    +S+ +   GL ++      A+GA S    G  
Sbjct: 51  MLEGALGSPRAVSETLVWATPYILAGLSVSLALK-GGLFNIGAEGQLALGALSAAWAGHW 109

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
               +   +P +  +     +      L         A     E+   I++ +  +    
Sbjct: 110 LPQLVGGGLPAALHVPVTLLLGALAGGLWAAVPGWIKARAGGHEVISTIMLNYVALNAVS 169

Query: 148 AGIYVADR-LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             +    +         R+ +         ++    +++        +A +   LRRT  
Sbjct: 170 FLLNGPMKDPEASNVLSRTPLIDESARIPALVDGFRLHWGFPLALLAAALVGWALRRTTF 229

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               RT   +  A       +    ++  A+S +F G+AGA   ++        F     
Sbjct: 230 GFEIRTAGQSPDAARYAGVRVSRTVIATMALSGSFAGLAGAIEVSALHHRHELGFSQGYG 289

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
              I+I +L G T       A  +   +      M +     +        +    +   
Sbjct: 290 FDAIAIALL-GKTHPGGTVLAALLFSVMRSGATRMQYLTQVPIDVISIIQALILLFVAAD 348

Query: 327 ALF 329
           AL 
Sbjct: 349 ALV 351


>gi|331001851|ref|ZP_08325372.1| hypothetical protein HMPREF0491_00234 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412174|gb|EGG91568.1| hypothetical protein HMPREF0491_00234 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 349

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 78/271 (28%), Gaps = 18/271 (6%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           YI  +  +    V+ A G+++VV S G   ++     A+       + S         + 
Sbjct: 47  YIIDVINRASELVILAVGMTLVVASSGGTDISVGAVCALSGAVACFILSGGE------VS 100

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            S   S      +    +           +    I   +               V +   
Sbjct: 101 TSVYHSPYIVAFVSAIIVGLVCGSFNGFLVAKMNIQPMVATLILFTAGRGMAQLVTNGQI 160

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                    +         +   +F+   ++ + F+        +RTA+     T+  N 
Sbjct: 161 TYIRVESFKMLGNSVKGIPLPTPVFIAIAVVILTFIIL------KRTALGLYIETVGINN 214

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           KA   +    +  +  A+A      G+AG   ++       +    +  +  I  V LGG
Sbjct: 215 KAAKLVGLNPVLIRFIAYAFCGLLAGLAGMIVSSRVYSADANNAGLNIELDAILAVALGG 274

Query: 278 MT------SLSKIAKATAILIGVVELCCGMN 302
            +      SL         +  +      M+
Sbjct: 275 NSLGGGKFSLLGSVIGAYTIQALTTTLYAMS 305


>gi|329922775|ref|ZP_08278310.1| branched-chain amino acid ABC transporter, permease protein
           [Paenibacillus sp. HGF5]
 gi|328941917|gb|EGG38201.1| branched-chain amino acid ABC transporter, permease protein
           [Paenibacillus sp. HGF5]
          Length = 331

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/315 (12%), Positives = 91/315 (28%), Gaps = 18/315 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   V  L+         +   I ++   I I  + A GL++ +   G   L+     +
Sbjct: 26  LITVFVLILVFGTVADNFLNTSNIINILRSISIVTIIAVGLTVSLAVGG-FDLSVGSTAS 84

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +     + L   +G +I + I ++ +   A G+I                 +        
Sbjct: 85  LANALVISLFVWHGQNIGIGIGLTLLFCLAVGLINAFLV------------INFKIDDML 132

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + +    I  G A  Y           + S         +       + ++++ M  +  
Sbjct: 133 MTLATMFIFQGVALTYTRGATISQNMIMPSGDFATGKIPALFEKIGQVPWIIIIMVLVVL 192

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + L+L  T        I  N++A       +   +L A+ VS+ F  + G    A    
Sbjct: 193 VVHLFLTYTKHGRYMYMIGGNREAAALSGIPVSKYRLIAYLVSALFAAVGGIILGARVMT 252

Query: 256 ISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
              +         V +      V   G  +         ++  +      ++  Y+   +
Sbjct: 253 AEVNSGGPYLMDAVAATFIGYSVFGAGKPNALGTFVGAVLIGILQNGLIMLSVPYYAMDI 312

Query: 311 KFDCSFNMRHTTLMV 325
                  +       
Sbjct: 313 VKGSVLALALALTYY 327


>gi|218663107|ref|ZP_03519037.1| branched chain amino acid ABC transporter permease [Rhizobium etli
           IE4771]
          Length = 241

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 89/242 (36%), Gaps = 14/242 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             + D +   LA +  ++    +G       + ++  +++   +    L +V G  G+ +
Sbjct: 13  QQRRDYVSRDLAGIMVIIAVAAIGYFAFPDNL-ALLTRMITIALLVLSLDLVTGYCGVAT 71

Query: 68  LNCVIAYAIGAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           L     +  GAY+  IL + Y      L++        A G++ G   L+  G    + +
Sbjct: 72  LGHAALFGSGAYAAGILSAHYGINDPLLMLLAGIAGGVASGLLSGAIILRAHGLPQLVLS 131

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           + +  +F     K    T G  G+        LG               F +Y    ++ 
Sbjct: 132 IALIHLFHEFANKASSWTGGSDGLSGIAPDPVLGL------------FEFDLYGRTAFFF 179

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            + +  +   ++  L R+      R I+ +     ++  +   A +  +A+S A  G+ G
Sbjct: 180 GMTLLLVVFVLLRLLVRSPFGMLCRAIKQDPLRIRAMGGSPKGALIRMYAISGAVAGVGG 239

Query: 247 AF 248
           A 
Sbjct: 240 AL 241


>gi|266621774|ref|ZP_06114709.1| galactoside ABC transporter, permease protein MglC [Clostridium
           hathewayi DSM 13479]
 gi|288866540|gb|EFC98838.1| galactoside ABC transporter, permease protein MglC [Clostridium
           hathewayi DSM 13479]
          Length = 333

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/324 (11%), Positives = 91/324 (28%), Gaps = 10/324 (3%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F ++    +  + L+ +   +++ +   A  S +    + +Q    ++ A G   V+   
Sbjct: 6   FDIKKWAQNNAIYLVLIAIIIMITVKNPAFLSLRVFRDILMQSSTRLIMAMGCMFVI-LS 64

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G   L+        A     L      +      ++ +      +   L  +        
Sbjct: 65  GGADLSGGRMLGAAAVLAGSLAQMSTYANKFFPNLAELPIIVPIIACLLMGMAMGLLNGI 124

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           +   +    F   L     I  G +  Y  +                    SF      +
Sbjct: 125 VVAKLNVPAFIGTLGVQLIIYGGISIYYNMEPNRSQPLGGFLKTYSKLGTGSFFGIPYIL 184

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
              ++ M      +               +  NQ+A       +    +  + ++ AF G
Sbjct: 185 IIAVVLMIACHIVL----NYHRFGKTLFAVGGNQEAARVSGINVQKIIMVVYIIAGAFYG 240

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           + GA  AA     + +  +  E   + + V+      GG+ ++  +A    +   +    
Sbjct: 241 LTGALEAARTGGATNNYGQGYELDAIAACVVGGCSVAGGVGAVPGVAIGVTVFTVIQYGM 300

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTT 322
             +    +   +       +    
Sbjct: 301 TFVGINPYWQNVVKGAIIVIAVAI 324


>gi|33599564|ref|NP_887124.1| putative branched-chain amino acid transport system permease
           protein [Bordetella bronchiseptica RB50]
 gi|33567160|emb|CAE31074.1| putative branched-chain amino acid transport system permease
           protein [Bordetella bronchiseptica RB50]
          Length = 291

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/295 (11%), Positives = 84/295 (28%), Gaps = 26/295 (8%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           LI  + + G ++ +G   +++           Y+  +L    G++ +L + +   ++ A 
Sbjct: 19  LILALLSTGFNLALGVSRVVNFQHGAVVLWSMYAAYVLWEATGINPYLGLLLIVPVAFAI 78

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G  +    +         + ++ S                                +   
Sbjct: 79  GYFLHRWLIIRSLQTPEDSQILFSIGLLIAFQYLAQFVYSTDARS-----------LTEE 127

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                     VI +            +   + L L RT +         N          
Sbjct: 128 SLQHSLIIGPVILQYTQLAAAAVSLLVLVLLHLMLTRTDLGRKLHACAQNPVGARVAGLN 187

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +      A  +++A   ++G   A            F  ++  + + +LGGM S+S    
Sbjct: 188 VEHLSAVALGIAAACAAVSGTALATMAPIFPERA--FEYSLAAVVVSVLGGMGSMSGSIL 245

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
              I+  ++ +                         ++   +FL+ L+R   L+ 
Sbjct: 246 GGLIVGVIIAVSQV-------------TGHGDLALAIVYALVFLIFLVRPTGLIS 287


>gi|262068088|ref|ZP_06027700.1| galactoside ABC transporter, permease protein MglC [Fusobacterium
           periodonticum ATCC 33693]
 gi|291378174|gb|EFE85692.1| galactoside ABC transporter, permease protein MglC [Fusobacterium
           periodonticum ATCC 33693]
          Length = 339

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/310 (11%), Positives = 87/310 (28%), Gaps = 8/310 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+     + + +      S +   ++  Q  +  + A G++ ++ + G   L+     
Sbjct: 21  LYLVLFCMLIAIIIKEPTFLSLRNFKNILTQSSVRTIIALGVAGLIVTQG-TDLSAGRQV 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     L             +         +I+ L  +        +   +    F 
Sbjct: 80  GLSAVISGTLLQSMTNVNKAFPTLGEFSIFTTVLIVVLVGVIIASINGIVVATLNVHPFI 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +     +    +  Y       +   V    +F +       Y I    +   +  L 
Sbjct: 140 ATMGTMTIVYGINSLYYDKAGAAPISGFVEKYSKFAQGYIQIGSYTIPYLIIYAAIATLI 199

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I+    +T        +  N +A       ++   +  +A+S A+    G   A    
Sbjct: 200 MWILWN--KTKFGKNVFAVGGNPEAAKVSGVNVVLTLIGIYALSGAYYAFGGFLEAGRIG 257

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + + VI      GG+  +S +     IL  +           +   
Sbjct: 258 SATNNLGFMYEMDAIAACVIGGVSFYGGVGRISGVITGVIILTIINYGLTYTGVSPYWQY 317

Query: 310 LKFDCSFNMR 319
           +         
Sbjct: 318 IIKGIIIVTA 327


>gi|297561794|ref|YP_003680768.1| inner-membrane translocator [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846242|gb|ADH68262.1| inner-membrane translocator [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 426

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/368 (12%), Positives = 105/368 (28%), Gaps = 61/368 (16%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  ++         S + + ++ +QI    +   G+ +V+  LG + L+     
Sbjct: 55  VVVGLILIAVVFQSANDRFLSPQNLSNLTVQIAAIGLMTTGVIMVL-LLGEIDLSIGSVA 113

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF- 133
            + A    +L  + G+S WL I  +  +    G++ G+   K       +    +     
Sbjct: 114 GLAAAVLGVLAVKQGVSEWLAIGAALAVGLVVGLLHGVVFAKLGVPAFVVTLAGLLGWQG 173

Query: 134 ------------------------QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
                                   Q   +           + +           R     
Sbjct: 174 LHLYLMGADGTINTSPSGPISLLTQTFFVPVVGWALAVLAVVLYVVSVAAVERRRRQANL 233

Query: 170 FRFPSSFVIYEIFMYYV------------------LLGMCFLSASIILWLRRTAISNAWR 211
              P + +++   + +V                   L        + L LR+T       
Sbjct: 234 PYKPWTEILFRAALLFVPILVAVWVLNQYKGVPLAFLIFVGFVVVLDLVLRKTRYGRMVY 293

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +  N +A       +   ++S F ++SA   + G    +     S       E ++ I+
Sbjct: 294 AVGGNAEAARRAGINVDMIRISVFGIASALAALGGIMLTSRNFAASVATGGGEELMMAIA 353

Query: 272 IVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
             ++      GG  +         +L  +               L      ++R      
Sbjct: 354 AAVIGGTSLFGGRGNAYSALLGGLVLGAITSGL-----------LLLQMDTSVRFMITAA 402

Query: 326 IALFLVIL 333
           + L  VIL
Sbjct: 403 VLLIAVIL 410


>gi|222099750|ref|YP_002534318.1| Monosaccharide-transporting ATPase [Thermotoga neapolitana DSM
           4359]
 gi|221572140|gb|ACM22952.1| Monosaccharide-transporting ATPase [Thermotoga neapolitana DSM
           4359]
          Length = 316

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 93/297 (31%), Gaps = 26/297 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L+ V   + L +      + + I ++ + +    + ++G+++V+ + G + L+     
Sbjct: 16  IFLILVAIVIFLGITTEEFLTVENIFTVILNVSFIAIMSFGMTMVIITAG-IDLSVGSVL 74

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +    +L +  GLS +  + +  ++    G+  G    K +         ++S    
Sbjct: 75  GVASVVMGLLMNERGLSPFWSVVLGLLVGVGFGLANGFLITKAKLAPFISTLGMLSV--- 131

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                         G+       +  +                +    +Y  ++G+    
Sbjct: 132 ------------GRGLAYVLSGGWPISPFPESFTIHGQGMVGPVPVPVIYMAVIGVISHI 179

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                  + T        I  N++A   +        +  + ++      AG    A   
Sbjct: 180 FL-----KYTVTGRRIYAIGGNEEASRLVGIKTDRILIMVYTINGFLAAFAGFLLTAWLG 234

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
              P+  +  E  ++ + VI      GG  ++        I+  +      +    F
Sbjct: 235 VAQPNAGQGYELDVIAATVIGGTSLSGGEGTILGAFLGAVIMGVLRNGMILLGVSSF 291


>gi|113461715|ref|YP_719784.1| sugar ABC transporter permease [Haemophilus somnus 129PT]
 gi|112823758|gb|ABI25847.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Haemophilus somnus 129PT]
          Length = 318

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 89/313 (28%), Gaps = 24/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + +   L L   +    S + + S+  Q+ ++ + A G++  + + G + L+     
Sbjct: 15  MVFILIALFLALSASIDGFFSTRTVWSIIEQVSMFGIIAIGVTFAIITTG-IDLSSGSMV 73

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ +     + +        L+  +  I     M                 +L       
Sbjct: 74  AMTSVVAASIVTGGDTVSSALLAFAISIVLGAAMGAI------------NGSLTAFGSIP 121

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +     +   + G  +      +  +  S           +   + +Y V++      
Sbjct: 122 PFIATLGMMIIARGGAQLYSSGRPIDASSESFTWISDVDFFGLPGLVLVYIVIVIAS--- 178

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L R+        +  N  A            +  +  + A  G+ GA  AA   
Sbjct: 179 ---HILLSRSTFGRHVYAVGGNLNAAKICGINTTKTLIWVYVFAGALSGLVGALLAARTY 235

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +P      E   + + VI      GG+ ++        I+    +    +    +   
Sbjct: 236 AGNPSYGLSWELDAIAAAVIGGVSLSGGIGTIPMCVIGALIIGTTNKGLNMLGVDPYWQQ 295

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 296 IIKGLIIVVAVLI 308


>gi|302340096|ref|YP_003805302.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
 gi|301637281|gb|ADK82708.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
          Length = 386

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/363 (11%), Positives = 90/363 (24%), Gaps = 47/363 (12%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++  +   ++  L V++ L   L  G   S + + ++     I  +   G+   +   G 
Sbjct: 16  IKGIRSYAMVGALIVIWVLFAILTGGTFLSVRNLSNLFRLTGIKGILVIGMVGCL-VSGE 74

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
             L+      +      +L ++Y ++    I +S +     G+  G            + 
Sbjct: 75  FDLSIGSVVGVTGAITALLQTQYDMNCVCAIAISLLAGLLIGVWQGYWIAYQNVPAFIVT 134

Query: 126 TLIMSEIFQNILI--------------------KWKPITNGKAGIYVADRLYFLGTTVRS 165
              M       ++                          +   GI       F    +R 
Sbjct: 135 LGGMMIFRGATVLVTKGCSIPVSNPDFALLGQEYLPGWLSILLGIICIGGFIFFEQGMRR 194

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS---------------------IILWLRRT 204
               + F  +        Y+++L +                                 +T
Sbjct: 195 RRSSYGFDIASKRVLFGKYFLVLVLVGCFVFGFNSYQGIPVPVLILLILYFIFAFLYNKT 254

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                   +  N KA       I    +  F +      +A     +     +P+     
Sbjct: 255 QYGRYIYAVGGNSKAAKLSGIDIRKVYMKVFVMMGFLSAVASNVLTSRLASATPNAGNSF 314

Query: 265 ENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           E   + + VI      GG   L        ++  +      +N       +       M 
Sbjct: 315 EMDSIAACVIGGISLTGGRGMLFGALVGALVMTSLGNGMSLLNLTAAWQDVIKGLILLMA 374

Query: 320 HTT 322
              
Sbjct: 375 VWF 377


>gi|237808686|ref|YP_002893126.1| inner-membrane translocator [Tolumonas auensis DSM 9187]
 gi|237500947|gb|ACQ93540.1| inner-membrane translocator [Tolumonas auensis DSM 9187]
          Length = 323

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/321 (13%), Positives = 95/321 (29%), Gaps = 27/321 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           + N  D    +  ++      +      +   I ++  Q  I    A G+++V+   G +
Sbjct: 18  KFNLRDAGTLIGLLIIVGTFAVLSPVFMTVPNILNILQQSSINAAIALGMTLVI-ISGGI 76

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+ A     L          ++    + +        L +            
Sbjct: 77  DLSVGPTAALSAVLGATLMVAGVPVPLAIMATLGIGALCGLFSGTLVA------------ 124

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
                     L  +     G +       +Y  G  +  +   FR   +  ++ I    V
Sbjct: 125 -------YAGLQPFIVTLGGLSLFRAGALIYTGGNPIFGIPMEFRNFITSELFGIPCPIV 177

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           ++ +  L+A I++   +T +      +  N++A       +   K++ + +S     +A 
Sbjct: 178 IVMIIALAAWILMN--KTPLGEYILAVGGNEEAARVAGVPVKRTKVTVYVISGVLASLAS 235

Query: 247 AFFAASRDRISPDMFKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
                      P M    E        +    ++GG  S+        IL  +      M
Sbjct: 236 LILVGRLGAAEPTMGSLWELDAIAAAAIGGTSLMGGKGSIIGTIMGAIILGSLRTGLTLM 295

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
           N   F  LL       +    
Sbjct: 296 NIQAFYQLLATGLIIIIAMLI 316


>gi|315178702|gb|ADT85616.1| inner membrane ABC transporter permease protein YjfF [Vibrio
           furnissii NCTC 11218]
          Length = 332

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/330 (12%), Positives = 89/330 (26%), Gaps = 22/330 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           L+ N    I   + ++          A  S + I ++        + A G++ V+   G 
Sbjct: 2   LKRNFPLFITISVFLLGYAFCMAEFPAFLSTRVICNILTDNAFLGILAVGMTFVI-LSGG 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A        L   +G   W+ + V+ ++    G +MG      +     + 
Sbjct: 61  IDLSVGSVVAFTGVLLATLIGDWGWHPWMAMGVALVMGALFGGLMGWVIDTLKIPAFIVT 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
              M                G + +     +       R L R            +    
Sbjct: 121 LAGMF------------FLRGVSFLISEQSIPIEHPLYRDLSRSAWHIIGGGRLSLMAVV 168

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +L+ +            RT   N    +  N  +   +   +    +  + +S+     A
Sbjct: 169 MLVVVALGMLLAH----RTRFGNNVYAVGGNPVSAALMGVPVKRTTIGIYMLSTFLATCA 224

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G  F+       P      E   + ++VI      GG+ ++        I   +      
Sbjct: 225 GIVFSIYTSAGYPLAAVGVELDAIAAVVIGGTLLSGGVGTVFGSLFGVLIQGLIQTYITF 284

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
                                 L  + + +
Sbjct: 285 DGTLSSWWTKIIVGILLFSFIALQRLLIIM 314


>gi|296100569|ref|YP_003610715.1| inner-membrane translocator [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295055028|gb|ADF59766.1| inner-membrane translocator [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 393

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/355 (12%), Positives = 97/355 (27%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     ++  G+  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWMTDGSYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             +      I     G  + L + V+ ++    G   G      +     +    M    
Sbjct: 91  MGLLGGVAAIFDVWLGWPLPLTVAVTLVLGLVLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 134 QNIL--------------------IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
             ++                               G+             R   +     
Sbjct: 151 GVLIGITNGTTVSPTSAAMSQIGQSYLSDSMGFTIGVVGLLAFVVWQWRGRMRRQSLGLA 210

Query: 174 SSFVIYEIFMYYVLLGMCFLSASI---------------------ILWLRRTAISNAWRT 212
           SS     +    +   +   +  +                     +    RTA       
Sbjct: 211 SSPSTSVVGRQALTAVIVLGAIWLLNDYRGVPTPVLLLALLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|328544139|ref|YP_004304248.1| High-affinity branched-chain amino acid transporter permease
           [polymorphum gilvum SL003B-26A1]
 gi|326413882|gb|ADZ70945.1| High-affinity branched-chain amino acid transport system permease
           protein [Polymorphum gilvum SL003B-26A1]
          Length = 292

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 96/305 (31%), Gaps = 27/305 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +  + A    ++  +  +++L       +GAY +    S  G+  W  IP++
Sbjct: 11  LAGLGSGALLSLTALAFVLIYKATRVINLAVGEVLMLGAYLFFAFASGLGMPAWAAIPLA 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
               GA G ++    ++       IA  +++    ++L+    +T G     +   +   
Sbjct: 71  IAGGGAIGAVVERGMIRPMLGENPIAVFMVTIGLGSVLVGLVELTWGTDPRALPAFMGNA 130

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +       +   +FV+  + +   L    F    +           A R    +Q A
Sbjct: 131 PIFLGEAYVSRKIAIAFVVAALVIALFLALFRFWRGGV-----------ALRATATDQAA 179

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
            +S    +      A+ +       AG    A               +  + +VI+GG+ 
Sbjct: 180 AYSCGINVPGVFSLAWIIGCGTAAGAGVLLGA---IGGISPAMGVFGLSALVVVIVGGLD 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S++        +  +           +  +  F               L + +++R + L
Sbjct: 237 SVAGALLGGLAIGLIEAWAGTYLGGEYKLVTTFG-------------LLIVALMIRPYGL 283

Query: 340 LRLRT 344
              R 
Sbjct: 284 FGTRE 288


>gi|314959176|gb|EFT03278.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL002PA1]
          Length = 333

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 97/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +   I ++GIQ  +  + A+G++ V+ + G + L+     
Sbjct: 35  ALVGLIILCIALFIATPVFLTVPNIINIGIQAAVVAIMAFGMTFVIVTSG-IDLSVGSVA 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A     + S  GL  WL + +  +I    G + GL     +                
Sbjct: 94  ALSAMVSAWMFSNAGLPGWLTLIIGLLIGLLAGAVSGLAIAYGKLPAFI----------- 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  + +      +        +   ++ +    
Sbjct: 143 -----------ATLAMMSVARGLTLVISGGTPVATSDAVNQLGADVGPIPVPVIMLALAG 191

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N++A       +    ++ +A+   F G+AG   A    
Sbjct: 192 VVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALVGVFAGLAGLVLAGRLS 251

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLS-----KIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI G   S              +L  +      +N   F   
Sbjct: 252 SAQPQAGFGYELDAIAAVVIGGASLSGGSGKASGTFIGAVLLAVIRNGLNILNVTSFWQQ 311

Query: 310 LKFDCSFNMR 319
           +   C   + 
Sbjct: 312 VVIGCVIALA 321


>gi|167568224|ref|ZP_02361098.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia oklahomensis C6786]
          Length = 292

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 81/287 (28%), Gaps = 14/287 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S      +Y +   GL ++  + G+L+       A+GAY              L  
Sbjct: 8   PYLISGLGVGAVYALSGVGLVVLYRASGVLNFAFGATGALGAYVAAACLDADYPQT-LAW 66

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +   S    ++ GL           +   + +  F  IL+ +     G     +    
Sbjct: 67  AAAIAASTVASLVYGLVLAPRLAARDRVVRSVATLGFALILLGFCEWYWGDTPRRLVLPT 126

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                    +   +       +    M  + + +            RT +    R + +N
Sbjct: 127 DSEALDFGDVRFTYTRIVGLALAFAMMAAIGVVLA-----------RTRLGLQMRALSNN 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +     L   ++   ++A+ +S  F G+ G   A                I   +  I+G
Sbjct: 176 RHLSGLLGIRVLRVDVAAWVISGVFAGITGLLLANLVRL--QAAVLTFLVIPAFAAAIVG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            + SL     A   +     L   +  +             +    +
Sbjct: 234 RLASLPATVAAGIAIGLAEALAITVPGFAQYRSATPFLIALVAMLFI 280


>gi|163759677|ref|ZP_02166762.1| inner-membrane translocator [Hoeflea phototrophica DFL-43]
 gi|162283274|gb|EDQ33560.1| inner-membrane translocator [Hoeflea phototrophica DFL-43]
          Length = 374

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 91/308 (29%), Gaps = 23/308 (7%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I   + V     +F       + + + +  +    +++ A G  +++   G   L+   
Sbjct: 32  GICGTVIVFVLFAIFAGDSGMFNSQGVLNWSVVSAQFMIIAVGACLLM-IAGEFDLSVGS 90

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMS 130
                     I        +W  I V+ ++  A G + G+  ++       + +A L + 
Sbjct: 91  MIGFAGMMIAIFSITLEWPVWQAIIVTFVLCTAIGALNGIIVVRTGLPSFIVTLAFLFIL 150

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY------ 184
             F   L +         GI  A    +L       I    F        I ++      
Sbjct: 151 RGFTIYLPQLIERKTIIGGIDKAAEGDWLAVLFGGKILGGLFTWLGDAGIIAVFERGNRA 210

Query: 185 ---------YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                     +++    L A   + L RT   N       + ++  +    +   K+  F
Sbjct: 211 GQPVVDGIPMLIIWALVLVAFGHILLTRTQFGNWIFASGGDAESARNSGVPVNRVKVLMF 270

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAI 290
             ++    +              D     E   +I++VI      GG  S+   A    I
Sbjct: 271 MFTAFCACVFATCQVMEFGSAGADRGLLKEFEAIIAVVIGGALLTGGYGSVIGAALGALI 330

Query: 291 LIGVVELC 298
              V +  
Sbjct: 331 FGVVQQGL 338


>gi|332983248|ref|YP_004464689.1| CUT2 family monosaccharide ABC transporter membrane protein
           [Mahella australiensis 50-1 BON]
 gi|332700926|gb|AEE97867.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Mahella australiensis 50-1 BON]
          Length = 344

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/316 (12%), Positives = 82/316 (25%), Gaps = 25/316 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +  +   LL      +  S + I ++  QI   ++   G   V+   G + L+      +
Sbjct: 27  IGLIALCLLFSFLNPSFYSARNIGNLLRQIAPILIIGIGQGYVL-ITGNIDLSIGSVVGM 85

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
                  L +R     W  + V+ +     G++ G    K +      ATL    + + I
Sbjct: 86  STMISATLMTRGVD-PWTAVLVTLISCLGVGILNGALVAKCKLPPFI-ATLGTMTVARGI 143

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                   N               T              +      +Y  +     +   
Sbjct: 144 AQIVNNNYN---------------TDAIGKAAQGFRDFFYYGSVAGVYNTIWIALAIFLV 188

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
               L RT        +  N +A            +  + +SS    + G     +   +
Sbjct: 189 FNFILSRTRTGRYIYAVGSNIEAAKLSGVNTDMTVIITYVISSFCAAVVG-LITCATAGM 247

Query: 257 SPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                     +  ++  ++GG+        L       AI   +               +
Sbjct: 248 GTMDAGTMYEMYAVAAAVIGGISTLGGQGILLGTVVGAAIWGVLQNGLQFAGAPVAIRNI 307

Query: 311 KFDCSFNMRHTTLMVI 326
                  +     +VI
Sbjct: 308 VIGTIVVVSVLLDVVI 323


>gi|264677282|ref|YP_003277188.1| inner-membrane translocator [Comamonas testosteroni CNB-2]
 gi|262207794|gb|ACY31892.1| inner-membrane translocator [Comamonas testosteroni CNB-2]
          Length = 291

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 81/304 (26%), Gaps = 22/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A GL++  G   +++L+        A+      S +G+S  LL+ +
Sbjct: 7   LLAGAMLGGLYGLVAMGLTLQYGVARIMNLSYGEFLIAPAFLAFFAVSSWGISPLLLVLL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +      ++    L            +  +           +            + F
Sbjct: 67  VLPLGFVIQWLIYQLLLTPLVRRAKGGPALEVDSILATFGMLFVVQG-------VMLVMF 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                         VL     L   + L L RT      R +    +
Sbjct: 120 GGDYHSYSYLSEPVEILGSKVAANRLLVLGFAIVLGGGLYLLLTRTRAGAVVRAVSVAPQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +      A+ +  A + + G   +                +  + +VI+GG+
Sbjct: 180 FAHLVGINVRSTAALAYGLGGALVAVCGVLVSMFLPF--SAGMGTMFAMKALIVVIMGGV 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L     A  +L     L            +                   LV+L +   
Sbjct: 238 GNLMGCLVAGMLLGFAETLVASFVDPGLTLAVN-------------YAVFLLVLLFKPTG 284

Query: 339 LLRL 342
           L   
Sbjct: 285 LFGR 288


>gi|254511127|ref|ZP_05123194.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacteraceae bacterium KLH11]
 gi|221534838|gb|EEE37826.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacteraceae bacterium KLH11]
          Length = 328

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/324 (11%), Positives = 98/324 (30%), Gaps = 33/324 (10%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR------------ 87
            +  +  ++Y + A G  ++  + G+ +    +     A + V + +             
Sbjct: 13  LNGLMAGVLYALVALGFVLIYKASGIFNYAQGVMALFAAMTLVGIMNGQVPFAHLINAIF 72

Query: 88  --------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                   + +  ++ I ++  +       +    ++       I   + +      L  
Sbjct: 73  GTHVHEFGWSVPGFVAILLTLAVMVLLAWAVQRFVMRHLVGQEPIILFMATIGLAFFLEG 132

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +  G     +   L            F  F   F I  + +    L    L  +++ 
Sbjct: 133 VADLMWGSEIKTLDVGLPQGINLWIDETTFQIFDYGFFIDNLDI-VATLIAALLVIALVA 191

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           + + T    A R + D+ +A  S+  ++ F  +  ++V+     +AG  +          
Sbjct: 192 FSQYTKQGRAMRAVADDHQAALSVGISLNFIWVMVWSVAGFVALVAGIMWGTKSGVQFSL 251

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                  +  + +++LGG TS+        I+    +L             +   +    
Sbjct: 252 S---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFALGPALGGATENWFA---- 304

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
                 +   + ++ R   L   +
Sbjct: 305 -----YVLALIFLVFRPQGLFGEK 323


>gi|186475270|ref|YP_001856740.1| monosaccharide-transporting ATPase [Burkholderia phymatum STM815]
 gi|184191729|gb|ACC69694.1| Monosaccharide-transporting ATPase [Burkholderia phymatum STM815]
          Length = 333

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 85/279 (30%), Gaps = 29/279 (10%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V  +++     +  S   ++++  Q+ I  + A G++ V+   G + L+     A
Sbjct: 38  FIGLLVVCIVMVFASDSFLSGANLENVLRQVSINAIIAVGMTAVI-LTGGIDLSVGSVMA 96

Query: 76  I-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           + G  +  ++ +       ++I V+  +         +         + +AT+ ++    
Sbjct: 97  LSGTLAAGLMVAGLNGVAAIVIGVAVGLGFGVANGFFVAFAGMPPIIVTLATMGIARGLA 156

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I     PI                                       +   +L M  + 
Sbjct: 157 LIYTGGYPIDGLP----------------------EWVSFFGSGKVFGIQAPVLIMLVVY 194

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A   L L R         I  N++A       +   KL  + ++     +A     +   
Sbjct: 195 AIAWLLLERMPFGRYVYAIGGNEQATRLSGVRVARVKLIVYTIAGLTSSLAAIVLTSRLM 254

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKAT 288
              P+     E   + ++V     I GG  S+       
Sbjct: 255 SGQPNAGVGFELDAIAAVVMGGTSISGGRGSIIGTLIGA 293


>gi|289427355|ref|ZP_06429068.1| amino acid or sugar ABC transport system, permease protein
           [Propionibacterium acnes J165]
 gi|289159285|gb|EFD07476.1| amino acid or sugar ABC transport system, permease protein
           [Propionibacterium acnes J165]
          Length = 334

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +   I ++GIQ  +  + A+G++ V+ + G + L+     
Sbjct: 36  ALVGLIILCIALFIATPVFLTVPNIINIGIQAAVVAIMAFGMTFVIVTSG-IDLSVGSVA 94

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A     + S  GL  WL + +  +I    G + GL     +                
Sbjct: 95  ALSAMVSAWMFSNAGLPGWLTLIIGLLIGLLAGAVSGLAIAYGKLPAFI----------- 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  + +      +        +   ++ +    
Sbjct: 144 -----------ATLAMMSVARGLTLVISGGTPVATSDAVNQLGADVGPIPVPVIMLALAG 192

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N++A       +    ++ +A++  F G+AG   A    
Sbjct: 193 VVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALAGVFAGLAGLVLAGRLS 252

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLS-----KIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI G   S              +L  +      +N   F   
Sbjct: 253 SAQPQAGFGYELDAIAAVVIGGASLSGGSGKASGTFIGAVLLAVIRNGLNILNVTSFWQQ 312

Query: 310 LKFDCSFNMR 319
           +   C   + 
Sbjct: 313 VVIGCVIALA 322


>gi|167919289|ref|ZP_02506380.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia pseudomallei BCC215]
          Length = 311

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 103/314 (32%), Gaps = 22/314 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M   GL+++ G LG+L+      Y +GAY+   + +R    + L+   
Sbjct: 8   LLNGLSYGLLLFMLCAGLTLIFGMLGVLNFAHASFYMLGAYAGYAIAARTSFWVALVAAP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+ +        L        +L    L     +               G+ +   L  
Sbjct: 68  LAVGALGALAERTLLRRVRASGHLDELLLTFGLAYLI-----------AEGVKLVWGLAP 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L   V + +    F     ++  +  +++L    +  ++   LR +      R     + 
Sbjct: 117 LAAPVPAALDGAAFTVYGAVFSRYRAFMMLVSIAMLGALWAVLRASRTGLVVRAALTRRA 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  +L   +       FA  +A   +AG   A     +       +   +V +++++GG+
Sbjct: 177 AVEALGHDVPRVMTLVFAAGTALAALAGVIGAPLA--VIEPAMAQTLGSVVFAVIVIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT---------TLMVIALF 329
            SL+    A+ +L               ++      +                +  + L 
Sbjct: 235 GSLAGALVASLVLGCAQTFAAASRASLSDAAQWAGIALPGAWRALTLAQLAPLIPYLLLI 294

Query: 330 LVILMRSHSLLRLR 343
            V+  R+  L   R
Sbjct: 295 AVLACRARGLFGER 308


>gi|294633036|ref|ZP_06711595.1| ribose transport system permease RbsC [Streptomyces sp. e14]
 gi|292830817|gb|EFF89167.1| ribose transport system permease RbsC [Streptomyces sp. e14]
          Length = 322

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/275 (13%), Positives = 78/275 (28%), Gaps = 30/275 (10%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            +  S   +     Q+   +M A G+++V+G+ G + L+     A+ A    +       
Sbjct: 42  SSFLSAGNVRIQLFQVAPTLMVALGMALVIGTEG-VDLSVGAVIALAASVVPLYVGYGAP 100

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              L+  V   +SGA G  M   +            + +  + + I              
Sbjct: 101 LAVLVALVFGAVSGAVGGTMVAFARIQPIVATLSLMIGLRGVAELINGNSAK-------- 152

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                           +      S        +  +       +    L +RRT      
Sbjct: 153 ---------------PVMNSGLLSLGSDGFAGVPLMAWIAGVCAVLTALLVRRTTFGRQL 197

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I DN++A       +    ++ + +S      AGA          P     +  +  I
Sbjct: 198 VAIGDNRQASKLAGLPVRRVLVTVYVLSGVLAAFAGAMIVGHGAEADPAHQGLNMELNAI 257

Query: 271 SIVIL------GGMTSLSKIAKATAILIGVVELCC 299
           + V++      GG   +         +  +  +  
Sbjct: 258 TAVVVGGTPLTGGRVRVLGTVAGALFMQLITAVLT 292


>gi|315079010|gb|EFT51022.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL053PA2]
          Length = 333

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 97/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +   I ++GIQ  +  + A+G++ V+ + G + L+     
Sbjct: 35  ALVGLIILCIALFIATPVFLTVPNIINIGIQAAVVAIMAFGMTFVIVTSG-IDLSVGSVA 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A     + S  GL  WL + +  +I    G + GL     +                
Sbjct: 94  ALSAMVSAWMFSNAGLPGWLTLIIGLLIGLLAGAVSGLAIAYGKLPAFI----------- 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  + +      +        +   ++ +    
Sbjct: 143 -----------ATLAMMSVARGLTLVISGGTPVATSDAVNQLGADVGPIPVPVIMLALAG 191

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N++A       +    ++ +A++  F G+AG   A    
Sbjct: 192 VVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALAGVFAGLAGLVLAGRLS 251

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLS-----KIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI G   S              +L  +      +N   F   
Sbjct: 252 SAQPQAGFGYELDAIAAVVIGGASLSGGSGKASGTFIGAVLLAVIRNGLNILNVTSFWQQ 311

Query: 310 LKFDCSFNMR 319
           +       + 
Sbjct: 312 VVIGWVIALA 321


>gi|302525080|ref|ZP_07277422.1| ribose/xylose/arabinose/galactoside ABC-type transport system
           [Streptomyces sp. AA4]
 gi|302433975|gb|EFL05791.1| ribose/xylose/arabinose/galactoside ABC-type transport system
           [Streptomyces sp. AA4]
          Length = 338

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 74/290 (25%), Gaps = 19/290 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    VV  ++  L      +   I S+        +   G S+V+   G   L+     
Sbjct: 30  LLPALVVVFVIGGLISDTFFTFDNIISILSAAAALSLVVLGESLVL-LTGKFDLSLESTM 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I      +L      S +     SA+   A  ++  L         + +          
Sbjct: 89  GIAPAIGAMLVIPAASSGFGTEWPSALGLVAIPVVGALIGFVNGFLIVKLKLNAFIVTLA 148

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +          G                  +   F +        +   +     L 
Sbjct: 149 MLTVLRGTQIGTTNGK-------------TLFDQLDAFTALATTTFAGLPMSVWLAAVLF 195

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L LR   +  +   I  N++A  +    +       F V+     + G  +     
Sbjct: 196 VVFGLGLRYHRVGRSLYAIGGNREAARAAGIRVDRISWVVFVVAGVLAAIGGLAYTGYVG 255

Query: 255 RISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCC 299
            +  D        +  + VI      GG  +L        +L  V  L  
Sbjct: 256 ALGADQGDGLILQVFAAAVIGGVSLDGGRGTLVGALTGVLLLQSVDSLLR 305


>gi|228991778|ref|ZP_04151717.1| Monosaccharide-transporting ATPase [Bacillus pseudomycoides DSM
           12442]
 gi|228767981|gb|EEM16605.1| Monosaccharide-transporting ATPase [Bacillus pseudomycoides DSM
           12442]
          Length = 316

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 85/294 (28%), Gaps = 27/294 (9%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           + +   +      +  +    LI V+ A G S V+     + ++      + A    +  
Sbjct: 17  VGIINPSFVQFSSLSLIMKSSLILVILAIGQSFVL-FTKNIDVSVGSIMGLSAAICGMFL 75

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           +     +  +I    + +                    +  +IM+     I+     I  
Sbjct: 76  TNGNSILISIIVAILLGAVIGM------INGVGVTKFRVPAIIMTLGMLGIIRGAMLIYT 129

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G   I    + Y                    +  + +   +  +  +   + ++L++  
Sbjct: 130 GGKWIEDIPKSYKQM---------------SSVMILGLPVTVWIILAILLLLYIFLKKAP 174

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
               +    DN+     +   +   K+ AF +S    G+AG  F  +   +        E
Sbjct: 175 FGRYFYAAGDNEDGARLIGIPVDKVKIYAFIISGMSAGVAGCIFVMNIGFVPNQTGTGIE 234

Query: 266 NIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             ++ + V+      GG  S+   A     L  +      +    F +      
Sbjct: 235 LQVIAAAVLGGIHLKGGTGSIFGAALGAIFLEVISSSLVFLKIPAFWNSAISGF 288


>gi|122545613|sp|Q2PBL9|LSRC_PHOLU RecName: Full=Autoinducer 2 import system permease protein lsrC;
           Short=AI-2 import system permease protein lsrC
 gi|84452508|emb|CAI91191.1| LsrC protein [Photorhabdus luminescens subsp. luminescens]
          Length = 331

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/320 (11%), Positives = 89/320 (27%), Gaps = 27/320 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            N  +    +  +    LL +      S + +  +     I ++ A G ++V+     + 
Sbjct: 6   QNNREITALIAILCLFGLLSVIDHQYFSLQTVTLVFSSAQILILLAIGATLVM-LTRNID 64

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++      + A    +     G ++ +   ++ ++    G I G      +         
Sbjct: 65  VSVGSIAGLCAVIMGM-SLNAGFNLPVSCLLTLLLGMCAGFINGALVTWLKIPA------ 117

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                    ++          G+ +          +   ++    P    I  I    ++
Sbjct: 118 ---------IVTTLGTLGLYRGLMLLLTDGKWIEXLPDELKRLSAPLWLNISPIGWLLMI 168

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +            +T     +    DN +    L       ++ AF+V+     +AG 
Sbjct: 169 LILAMAWILA-----KTTFGRNFYATGDNLQGARQLGVRTDSIQIIAFSVNGIMAALAGI 223

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
            FA+    I        E   + + V     +LGG  ++         L  +      + 
Sbjct: 224 VFASQIGFIPNQTGSGLEMRAIAACVLGGISLLGGTGTVIGAILGAFFLTQINSGLVLLK 283

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              + +              
Sbjct: 284 LPAWWNDFIAGFVLLAVLIF 303


>gi|119387571|ref|YP_918605.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119378146|gb|ABL72909.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Paracoccus denitrificans PD1222]
          Length = 325

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/314 (10%), Positives = 96/314 (30%), Gaps = 29/314 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  +V  ++  +      +   + ++  Q+ +  + A+G++ V+  LG + L+     
Sbjct: 26  ILVSLIVLCVIFTVLNERFMTVANLTNILQQVAVVAIAAFGMTWVI-LLGEIDLSIGSII 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+   +     +        L+   A  +                        +++ +  
Sbjct: 85  AVAGMAGAQALAFGWGFAPALLFTLAAGAAMG---------------------LVNGVLT 123

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+    I            +        ++I    + +      + +  ++  +  L 
Sbjct: 124 AKLMLPSFIVTVATMGIYRGLVSLPTNGAPAMISDPAWTAIGGSSWLGLPIIIWIVVALF 183

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L RT           N++A       +   K++ F +S     ++G   ++   
Sbjct: 184 LFNHILLSRTTFGRRAYLTGGNREAALYSGIKVDRLKIAIFTLSGVMAAVSGILLSSRLY 243

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
               +    S  +  I+  +L      GG+ ++        I+  +      ++  YF  
Sbjct: 244 SAQTNA-GMSYELDAIAAAVLGGTSLAGGVGTMVGTLIGALIIGVMNNGMNMLSVPYFYQ 302

Query: 309 LLKFDCSFNMRHTT 322
           L+       +    
Sbjct: 303 LIVKGLVILIAVWL 316


>gi|94313703|ref|YP_586912.1| putative branched-chain amino acid ABC transport system permease
           [Cupriavidus metallidurans CH34]
 gi|93357555|gb|ABF11643.1| putative branched-chain amino acid ABC transport system permease
           protein [Cupriavidus metallidurans CH34]
          Length = 288

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 90/297 (30%), Gaps = 26/297 (8%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            +  + + GLS+ +G +  ++L       +G Y  V+L +R G+     +P++ + + A 
Sbjct: 17  SLLFLISIGLSVTMGLMNFVNLAHGAFAMLGGYVAVVLMNRAGVPFLAALPLAFLGAAAA 76

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G ++     +       +  ++ S     + +       G     V              
Sbjct: 77  GWVLERTLYRRLYRASHLDQVLFSIGLTFMAMAGATWLFGPGQQPVVLP----------D 126

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
               +     V    +  +++  +  ++ ++   + RT      R   D+Q+A   L   
Sbjct: 127 FLIGQVRVGGVDLGAYRLFLIAVVIAITLALGWLVARTRFGAQVRAAVDHQQAARGLGID 186

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +       FA+ S                     F     +  + +V +GG  S+     
Sbjct: 187 VERVFSLTFALGSGL--AGLGGGLGIDVLGLDPTFPLKYMVYFLLVVAVGGAGSIRGSLV 244

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
           A  +L                               ++   + L+++     L   R
Sbjct: 245 AAIVLGVADVAGKYY--------------VPEIGAFVIYAMMVLLLVAFPAGLYGRR 287


>gi|323144926|ref|ZP_08079489.1| ribose ABC transporter permease protein [Succinatimonas hippei YIT
           12066]
 gi|322415324|gb|EFY06095.1| ribose ABC transporter permease protein [Succinatimonas hippei YIT
           12066]
          Length = 325

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/293 (12%), Positives = 88/293 (30%), Gaps = 27/293 (9%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           MS F     +      +  ++  +++ +   +  +   + ++G Q+ I  + A G++  +
Sbjct: 12  MSTFKALSKQPIFYPLIGFLLVFIIMTVVSDSFLTYNNLSNIGRQVSINAIIAVGMTFAI 71

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
              G + L      A+       L +        ++   A+     G+   + +      
Sbjct: 72  -LTGGIDLAVGSVMALSGTIMAGLMAGGMPMTVAIVAGIALGCVLGGLNGMMVA------ 124

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           Y  +   I++     I      I  G                +  + + F F     +  
Sbjct: 125 YAKMPPFIVTLAMMTIARGLALIYTGG-------------YPIAGIDQAFAFFGRGSVLG 171

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           I    ++  + +  A I+L    T           N +A       +       + +S  
Sbjct: 172 IETPIIITVIVYAIAYIVLN--HTPFGRHVYATGGNYEASRLSGIKVSRILFLVYTISGL 229

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG-----GMTSLSKIAKAT 288
              +AG    +      P+     E   + ++V+ G     G  ++       
Sbjct: 230 TSALAGLIITSRLMSGQPNAGVAFELDAIAAVVLGGAAMNGGKGTILGTLMGA 282


>gi|296100713|ref|YP_003610859.1| ribose ABC superfamily permease component [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295055172|gb|ADF59910.1| ribose ABC superfamily permease component [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 331

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 93/313 (29%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +         ++  + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 30  ILPILILIVAVFGFIAPNFFTESNLLNITRQASINIVLAAGMTFII-LTGGIDLSVGSIL 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A     +          L   +A++ G    +     + F G    I TL      +
Sbjct: 89  GTTA--VAAMVVSLIPEFAGLSIPAALMLGLVLGLFNGALVAFAGLPPFIVTLGTYTALR 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                          +     F      Y   + ++++    + 
Sbjct: 147 GAAYLLAD-------------------GTTVINSNINFEWIGNNYLGPVPWLVVIALAVI 187

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 188 VVCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGVMSASRLY 247

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 248 SANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 307

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 308 VIKGAVIIIAVLI 320


>gi|260768342|ref|ZP_05877276.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio furnissii CIP 102972]
 gi|260616372|gb|EEX41557.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio furnissii CIP 102972]
 gi|315180052|gb|ADT86966.1| beta-methylgalactoside transporter inner membrane component [Vibrio
           furnissii NCTC 11218]
          Length = 335

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/326 (10%), Positives = 94/326 (28%), Gaps = 13/326 (3%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F+L+  K   I  +L V+  +++     +  S + + ++  Q  + ++ A G++ ++ + 
Sbjct: 7   FALKHLKEGAIYAVLFVLLAVIVIQ-EPSFLSLRNLSNILTQSSVRIIIALGVAGLIVTQ 65

Query: 64  GLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           G   L+      + A      +        ++  I    +I+    + +    +      
Sbjct: 66  G-TDLSAGRQVGLAAVISATLLQSIDNVNKVFPSIGEVPIIAVIICVCLIGAIIGLVNGV 124

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           +     +   I     +      N      V            +             +  
Sbjct: 125 IVAYLKVTPFIATLGTMIIVYGINSLYYDAVGASPIAGFDDRFTAFTQGFIRIGGFRFSY 184

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +Y ++   F+         +T        +  N +A       +    L  +A+S  F
Sbjct: 185 ITFYAIIATVFMWIL----WNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVF 240

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
               G   A      + ++    E   + + V+      GG+ S++ +     I   +  
Sbjct: 241 YAFGGMLEAGRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINY 300

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               +    +   +            
Sbjct: 301 GMTYIGVSPYWQYIIKGSIIVFAVAL 326


>gi|237728170|ref|ZP_04558651.1| inner-membrane translocator [Citrobacter sp. 30_2]
 gi|226910181|gb|EEH96099.1| inner-membrane translocator [Citrobacter sp. 30_2]
          Length = 331

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 95/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +         ++  + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 30  ILPILILIVAVFGFIAPNFFTESNLLNITRQASINIVLAAGMTFII-LTGGIDLSVGSIL 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A     +       + +L   +A++ G    +     + F G    I TL      +
Sbjct: 89  GTTA--VAAMVVSLIPELAMLSIPAALMLGLVLGLFNGALVAFAGLPPFIVTLGTYTALR 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                          +     F      Y   + ++++    + 
Sbjct: 147 GAAYLLAD-------------------GTTVINSNISFEWIGNNYLGPVPWLVVIALAVV 187

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 188 VVCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGVMSASRLY 247

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 248 SANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 307

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 308 VIKGAVIIIAVLI 320


>gi|222102236|ref|YP_002546826.1| sugar ABC transporter, permease protein [Agrobacterium radiobacter
           K84]
 gi|221728353|gb|ACM31362.1| sugar ABC transporter, permease protein [Agrobacterium radiobacter
           K84]
          Length = 335

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/263 (11%), Positives = 85/263 (32%), Gaps = 19/263 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +     +  + L        +   I ++  Q+ I  + A GL+ V+ + G + L+     
Sbjct: 33  IAFGFAILCVFLAFASPYFATWDNIGNILAQVSINGIMAVGLTFVILAAG-IDLSVGSVL 91

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       + +  G+ + +   V   ++                     A +  S    
Sbjct: 92  ALAGIVAASVVTNSGMDLGVTAAVIVGLAVGGLAG-----------ATNGAIISASSRIP 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             ++    ++  +    V +    +       +         +   ++++ ++  + +++
Sbjct: 141 PFIVTLGMLSAARGITQVYNHGSQISDLSDDFMLLGNGQIGGIQISVYLFALVALIGYIA 200

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                  + T        +  N++   +    +   K S + +S    G++G  F +   
Sbjct: 201 L------KYTRFGRYVYAVGGNERGARTAGVNVGLIKFSVYLISGICAGLSGIIFTSRAT 254

Query: 255 RISPDMFKFSENIIVISIVILGG 277
             S         +  I+ V++GG
Sbjct: 255 SASLQA-GLGYELDAIAAVVIGG 276


>gi|218678579|ref|ZP_03526476.1| probable branched-chain amino acid ABC transporter, permease
           protein [Rhizobium etli CIAT 894]
          Length = 234

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 14/221 (6%)

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           G  GLLS     ++   AY        +GL   L I V    +   G+IMG  +++ +G 
Sbjct: 28  GYTGLLSFGHATSFGGAAYFTAYTVKAWGLPPELGILVGVAGAAFLGLIMGFFAIRRQGI 87

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
           Y A+ TL +S++F    ++ K                     ++S+ R   F    +   
Sbjct: 88  YFAMITLALSQMFFFFCLQAKFTEG--------------EDGIQSVPRGHLFGVIDLNSS 133

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             MYY +L +  +   II     +      ++IR+N++   SL  ++   KL AF +S+A
Sbjct: 134 TNMYYFVLAVFLIGVLIIWRFINSPFGMILKSIRENEQRAISLGYSVARYKLGAFVMSAA 193

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
             G+AGA  +      +     +  +  VI + +LGG+ +L
Sbjct: 194 LAGLAGAVKSIVFQFATLTDVAWQMSGEVILMTLLGGIGTL 234


>gi|238786875|ref|ZP_04630676.1| Amino acid or sugar ABC transport system, permease protein
           [Yersinia frederiksenii ATCC 33641]
 gi|238725243|gb|EEQ16882.1| Amino acid or sugar ABC transport system, permease protein
           [Yersinia frederiksenii ATCC 33641]
          Length = 311

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/282 (12%), Positives = 75/282 (26%), Gaps = 17/282 (6%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
               V+ A GL+++ G +G+++L        GAY  +++        + ++  +   +  
Sbjct: 40  FAYLVLAALGLAVIFGMMGVINLAHGEFIMCGAYVTILMNKAGLPLPFAMLAGTLAAAFF 99

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
            G++  L      G                +             +  +  L    +    
Sbjct: 100 GGVVERLVVRHLYGR---------------LYDSVVATWAISLIVQQSMLLIAGPSLEGL 144

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
              F  F      +  +   +      +   +      T      R    N +    L  
Sbjct: 145 STPFGSFTLGEYSFATYRALLPFFAIAILMVLYWLFFHTNYGVCARATIQNARMASCLGL 204

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                    FA+ +   G+AGA +A +   +      F         V++GG   L    
Sbjct: 205 ETDRIYTLTFALGAGLAGLAGAIYAPTLTAVPTMGSSFIVQ--AFVSVVVGGANVLVGTI 262

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            A   L  +              +     +  +       I 
Sbjct: 263 PAAIALGAIQTGLNSWYGQLAGQIGLLVTAVLVIRLLPNGIG 304


>gi|330810205|ref|YP_004354667.1| ribose ABC transporter permease [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327378313|gb|AEA69663.1| putative ribose ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 340

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/319 (14%), Positives = 97/319 (30%), Gaps = 26/319 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + L+ +   L+  +F    + Q ++ +      M +Q+ I  + A G++ V+ + G + L
Sbjct: 26  IFLVLIGIGLVFEMFGWIMRDQSFLMNSQRLVLMILQVSIIGLLAIGVTQVIITTG-IDL 84

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+ A     L              S         +  LP        L +  L 
Sbjct: 85  SSGSVLALSAMIAASLAQ-----------TSDFARAVFPSLTDLPVWIPVVAGLGVGLLA 133

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
            +     I +   P      G+ V+ R      T    +       + + +      + L
Sbjct: 134 GAINGSIIAVTGIPPFIATLGMMVSARGLARYYTEGQPVSMLSDSYTAIGHGAMPVIIFL 193

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +        + LR T        I  N +A  +    +    +  ++++    G+AG  
Sbjct: 194 VVA---VIFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLVIVYSIAGLLAGLAGVV 250

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            +A        M    E   + + VI      GG+  ++       IL  +      +  
Sbjct: 251 ASARAATGQAGMGMSYELDAIAAAVIGGTSLAGGVGRITGTVIGALILGVMASGFTFVGV 310

Query: 304 YYFNSLLKFDCSFNMRHTT 322
             +   +       +    
Sbjct: 311 DAYIQDIIKGLIIVVAVVI 329


>gi|311030915|ref|ZP_07709005.1| sugar ABC transporter ATP-binding/membrane protein [Bacillus sp.
           m3-13]
          Length = 333

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/315 (12%), Positives = 96/315 (30%), Gaps = 18/315 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +   V   +  L   A      + ++   I I  + A G++I +   G   L+     +
Sbjct: 29  IITIFVLIAVFALANPAFIQSNNVINILRSISIVTIIAIGITISLTVNG-FDLSVGSVAS 87

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +     + +   +  +  + I  +   +   G       +K +     + TL    I Q 
Sbjct: 88  LSNAIVISMFVWFSQNTAVAIFSAIAAALLVGAFNSFMIVKLKI-PDMLMTLATMFIIQG 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I + +   +     + ++D  +  GT      +F + P           ++++ M  +  
Sbjct: 147 IALTYTKGSTISQNMVMSDGTFATGTISPLFQKFGQVP-----------WIIVIMLTIVV 195

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + ++L  T        I  N +A       +   K++A+  S+    + G   A+    
Sbjct: 196 VVHIFLTYTKHGRFMYIIGGNAEAAKLSGIAVNKYKVAAYLFSALLAAIGGMVLASRIMT 255

Query: 256 ISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
              +         V +      V+  G  +         ++  +      M+  Y+   +
Sbjct: 256 AEINAGTPYLMDSVAAAFIGFAVLGAGKPNAFGTFIGAVLIGILQNGLVMMSVPYYAMDI 315

Query: 311 KFDCSFNMRHTTLMV 325
                          
Sbjct: 316 VKGLVLAFALGITYY 330


>gi|160937826|ref|ZP_02085185.1| hypothetical protein CLOBOL_02718 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439265|gb|EDP17018.1| hypothetical protein CLOBOL_02718 [Clostridium bolteae ATCC
           BAA-613]
          Length = 326

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/298 (8%), Positives = 74/298 (24%), Gaps = 25/298 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                  ++  +        + A G ++ +   G + L+              +      
Sbjct: 42  PGYLKPTHVAGILRLASFMGIAAIGQNLTI-LTGGIDLSIANTITFANVIAAQIMMGRNE 100

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           ++   +    ++    G I G+     +     +                     G   +
Sbjct: 101 NLPAALFAVIVMGVMVGFINGVGIHWLKIPPFIMTL-------------------GVGTV 141

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                L +     +              +   +  +++    ++A  I+ LR T      
Sbjct: 142 IQGVFLIYTKGAPKGNASPLLKAICGQSFIGILSGIVVIWAVMAAVTIVLLRNTPYGRKI 201

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
            ++  N++A             S + +S+    ++G F          D+        + 
Sbjct: 202 YSVGTNEQAARFSGIHTGRVTFSVYLISAVIAAVSGFFLVGYTGTSFLDVGTSYNTKTIA 261

Query: 271 SI-----VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
           ++      I GG            I+  + +    +N       +       +     
Sbjct: 262 AVIIGGTAITGGKGGYIGTIAGAIIMTILDDFLTIVNIPEAGRQIMQGVIIVLLVLIY 319


>gi|27377786|ref|NP_769315.1| sugar ABC transporter permease protein [Bradyrhizobium japonicum
           USDA 110]
 gi|27350931|dbj|BAC47940.1| sugar ABC transporter permease protein [Bradyrhizobium japonicum
           USDA 110]
          Length = 325

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 90/313 (28%), Gaps = 29/313 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L A++   +L +   +  S   I ++  Q  +    A GL++VV + G L L+     A
Sbjct: 27  LLAALLICAVLAVLSDSFLSLGNILNVLRQASLTFFIASGLTLVVLTAG-LDLSVGANVA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + A            S  L I       G  G++ G+     R         ++      
Sbjct: 86  LSACIAG-TVIHKTGSPALGILTGLACGGIVGLLNGVMVTALRIPSFIATYGMLW----- 139

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                           +    Y+             F      Y   +   +  +     
Sbjct: 140 ---------------VLNGLTYWYMAGETLHGFPAGFRQIGSGYLFGLPIPVYLLLVFLG 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              L+ +RT        I  N  A       +    L  +AVS    G+A   F +  + 
Sbjct: 185 IGTLFAQRTIWGQEIYAIGANPVAARLSGIPVARRLLLVYAVSGTMAGLASIIFLSRLNS 244

Query: 256 ISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              D    S  +  I+ V++      GG+ ++        IL  V+     ++       
Sbjct: 245 AEAD-IGESLTLPAIAAVLIGGTSLFGGVGTVFGTFIGALILTLVLNGMNLLSVSANWQP 303

Query: 310 LKFDCSFNMRHTT 322
           L       +    
Sbjct: 304 LVTGVIVILAVWL 316


>gi|325261576|ref|ZP_08128314.1| ribose ABC transporter, permease protein [Clostridium sp. D5]
 gi|324033030|gb|EGB94307.1| ribose ABC transporter, permease protein [Clostridium sp. D5]
          Length = 326

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/289 (11%), Positives = 83/289 (28%), Gaps = 23/289 (7%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               S   + ++ +     ++ + G  ++      + ++     A   Y+  +L   Y  
Sbjct: 32  PRFFSTTSLVNILLFFPFLLIVSLG-EMIEIVSRNVDMSLGAILACSGYAAGLLFKTYSG 90

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
                  + A+  G    ++    +        I TL    +++ ++     I  GK   
Sbjct: 91  LPIAAAFIVAIALGCVLGLINGFIVTRFQIPSVIVTLGTMNVYRGVIF----ILGGKQID 146

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                   +  +                  I + Y +L     +  + ++L+        
Sbjct: 147 NSVIPQSLMALSQPKQ------------SIIGIPYSVLIALLAAVLLAVFLKYFRAGREI 194

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N  A      +    +L  F ++    G+AG  F +    + P           I
Sbjct: 195 YEIGCNPAAASLRGISNNRVQLFVFTLAGGLSGLAGMVFISRIGYMDPGAAGRGLEFTAI 254

Query: 271 SIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
           + V++      GG+  ++       +L  +           +     + 
Sbjct: 255 AAVVIGGTSMNGGVGKVTGTVLGCLLLGVIQNAISITGISGYWQEAIYG 303


>gi|163868305|ref|YP_001609514.1| permease protein of ABC transporter [Bartonella tribocorum CIP
           105476]
 gi|161017961|emb|CAK01519.1| permease protein of ABC transporter [Bartonella tribocorum CIP
           105476]
          Length = 356

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/342 (9%), Positives = 87/342 (25%), Gaps = 50/342 (14%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y  +      +Y + A G ++V G L L++      + +GAY        +  +   L+
Sbjct: 8   QYFFNALALGSLYGLIAIGYTMVYGILRLINFAHGDIFMLGAYFVFFSTISFMPAWAALL 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL------------------- 137
            +         + +G               L +  ++   +                   
Sbjct: 68  LLFFAALIYYSVFVGFKRRPPTYWGAVFFILALGFVYYLKISPQDFTPIWILALCFSIFI 127

Query: 138 ------------------------------IKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
                                         + +              +       + +  
Sbjct: 128 TSAVGITVDQLAYKPLRHAPRISALIGAIGVSFFIENLATVLFSGVPKGVKQPDFLVTPF 187

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
            +       +        V +    L   ++  + +T    A R I  + +    +  ++
Sbjct: 188 LWHLGSGGIIRIAPMSLIVPIVSLILIVLLLWIIHKTKPGLAMRAISHDIETTRLMGVSV 247

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
                  F + SA   +AG  ++    +I P M      +      ++GG+ S+      
Sbjct: 248 NKVIAFTFGIGSALAAIAGIMWSLRYPQIQPYM-GVLPGLKAFIAAVIGGIGSIPGAMLG 306

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             +L  +  +              F     +    ++   L 
Sbjct: 307 GLLLGFIEIMIIAFFPALSGYRDAFAFILLILILLVLPTGLM 348


>gi|15964920|ref|NP_385273.1| branched chain amino acid ABC transporter permease [Sinorhizobium
           meliloti 1021]
 gi|307300991|ref|ZP_07580760.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
 gi|15074099|emb|CAC45746.1| Putative branched-chain amino acid transport permease
           [Sinorhizobium meliloti 1021]
 gi|306903946|gb|EFN34532.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
          Length = 298

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 88/275 (32%), Gaps = 2/275 (0%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
             +Y   A+G +I         L     +A     +V+        +WL++P +  +   
Sbjct: 15  AALYAALAFGYAIAFAVTRRADLTYGALFAFAGQIFVLFADVGWNRLWLVLPAALGLGAT 74

Query: 106 CGMIMGLPSLKFRGDYLA-IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
             +  GL +    G Y+        +       +    +    A +    R  +L   + 
Sbjct: 75  AALAFGLGAGLIAGRYVMRPLAFSSANAVVVASLGSLLVLMETARLASDTRSLWLPPFLN 134

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
            ++ F+  P+  V   +        M  L A     L R+     WR + +++KA     
Sbjct: 135 DVVVFWPNPAFPVALTVVQLVNTALMMALVAGGHWLLTRSYAGRYWRAVSEDRKAAALCG 194

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                  ++A+ V+S      G   A+    +       +  + V+ I  +GG TS    
Sbjct: 195 IDPGAVYIAAYGVASLIAAFCGILAASYYGNMDF-GTGLTFGVKVLFIAAIGGQTSPLFA 253

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           A   A +  +  +        +     F     + 
Sbjct: 254 ALGAAGIGLMETVWSAYGPILWRDFAIFGFLVIVL 288


>gi|302343904|ref|YP_003808433.1| branched-chain amino acid ABC transporter permease [Desulfarculus
           baarsii DSM 2075]
 gi|301640517|gb|ADK85839.1| protein of unknown function DUF534 [Desulfarculus baarsii DSM 2075]
          Length = 946

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 83/292 (28%), Gaps = 19/292 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
                +   +Y   + G+ I         +    ++  GA +   L          L+  
Sbjct: 4   WVGAVVLGFLYAFMSMGVFITFRVYNFPDITVDGSFTTGAATCAALIVAGLHPALALLGA 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+   A        +       L +  L+   +    L        G        R   
Sbjct: 64  LAVGMAAG------AATGLIHTRLGVNGLLSGILVMTGLYSVNLHIMG--------RSNI 109

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +L+      +  +  E+++   L  +      +     ++ +  A R   DN  
Sbjct: 110 PLLQHATLMSGLEGLNPGLPSEVWLILHLSLIMAGFWLLTTAFFKSDLGMAMRATGDNAV 169

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG-- 276
              +    +    +   AV++  +G++G   A  +      M      ++ ++ VI+G  
Sbjct: 170 MAAANGVGVNRLTVFGLAVANGLVGVSGGLVAQYQGFADVTM-GVGTIVVGLASVIIGES 228

Query: 277 --GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
              + SL        +   V  L   +  Y   + +             +V+
Sbjct: 229 LLRVKSLYGQVLGAIVGSVVFRLMIAVALYLGLNPIDLKILTAAFVLLTLVL 280


>gi|262045485|ref|ZP_06018507.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259037178|gb|EEW38427.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 332

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 96/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +         ++  + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 31  ILPILILIVAVFGFIAPNFFTESNLLNITRQASINIVLAAGMTFII-LTGGIDLSVGSIL 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A     +      +  LL   +A++ G    +     + F G    I TL      +
Sbjct: 90  GTTA--VAAMVVSLIPAFALLSIPAALMLGLLLGLFNGALVAFAGLPPFIVTLGTYTALR 147

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                          +     F      Y   + ++++    + 
Sbjct: 148 GAAYLLAD-------------------GTTVINSDISFEWIGNDYLGPVPWLVVIALAVI 188

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 189 AMCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGVMSASRLY 248

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 249 SANGNLGVGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 308

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 309 VIKGAVIIIAVLI 321


>gi|89899816|ref|YP_522287.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
 gi|89344553|gb|ABD68756.1| inner-membrane translocator [Rhodoferax ferrireducens T118]
          Length = 298

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 86/302 (28%), Gaps = 19/302 (6%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +           + + G+++V G L +L++     YAIGAY+     +            
Sbjct: 8   VIDAVAYASWLFIVSLGMTLVFGVLKILNMAHGSVYAIGAYAAATAVALAAALGLPPAFS 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +  +   +            LA        +   +      +      +      Y+
Sbjct: 68  LVAMLLSAVAVAVTVGPLLERGLLARYYGRDEVVLLLVTYALFLMLEDVTKLIWGVNPYY 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +         F     + +    +  ++++            L RT        +  N +
Sbjct: 128 VS---EPAQLFGNVLFAGMRIGGYDLFLMVLAAVCGLITWYVLNRTTSGKIVLAVIHNPE 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              S+   I    + AF V      + GAF A             S  II  ++VI+GG+
Sbjct: 185 MSASMGVNIQRVYVVAFTVGVFLAALGGAFTAPMISV--QPGLSVSVIIISFAVVIIGGL 242

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A    ++     L   +                      + + +  V++ R   
Sbjct: 243 GSIQGAAVGALVVGVARSLAVHL--------------LPEIELFSIYLVMAAVLIFRPEG 288

Query: 339 LL 340
           L 
Sbjct: 289 LF 290


>gi|318059434|ref|ZP_07978157.1| ABC transporter permease [Streptomyces sp. SA3_actG]
          Length = 347

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/318 (13%), Positives = 95/318 (29%), Gaps = 27/318 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           ++D  +  L VV  L  F F+    +   +  +    L   + A  ++++V   G + L+
Sbjct: 27  RWDTAVGALLVVLLLCSFSFVDNFGNALNLSFLIGNTLPIALIALPMTMLV-VSGEVDLS 85

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +       L +            + +       ++           L + +L +
Sbjct: 86  VGSTVGLSGAVMGALWNHGM------AIETIIPLCVLLGVVCGLVNGLLVTRLGLPSLAV 139

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +            I  G   +      Y                 +    E F+ Y  + 
Sbjct: 140 TIGTMAAYRGIAQIVLGSDSVTDFPSPYLDF-------------GAGRFGETFLPYAAVP 186

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              L    ++ L  T +  +   I  +++A       +   +LS F  +     + G F+
Sbjct: 187 FLVLLVLAVVVLHATRVGRSLFAIGASEEAARFAGVRVKRLRLSMFVTTGVLSALTGVFW 246

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNF 303
           A        D       + VI+ V+LGG+       +L        +L  +  +   +N 
Sbjct: 247 ALHYASARYDNAT-GLELSVIAAVLLGGIDFDGGRGTLGGAIAGVFLLGTLQNVMSLLNV 305

Query: 304 YYFNSLLKFDCSFNMRHT 321
              + ++       +   
Sbjct: 306 SAQSQIVVTGVLLVVSVL 323


>gi|304317774|ref|YP_003852919.1| inner-membrane translocator [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779276|gb|ADL69835.1| inner-membrane translocator [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 386

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/359 (11%), Positives = 95/359 (26%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  L  ++ +   L  G   S + +  +  Q+ I  + A G+ +V+   G + L+
Sbjct: 21  RAYTMILALLGIWVIFTVLMHGDFLSSRNLSMLARQMSITAILATGMVLVI-VAGHIDLS 79

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA------ 123
                        IL   Y  +    I ++ ++    G   G      +           
Sbjct: 80  VGSVAGFTGAVAAILQVIYHWNTVPTIIITLLVGFIIGTWQGFWIAYRKVPAFIVTLSSM 139

Query: 124 -----------------------------------IATLIMSEIFQNILIKWKPITNGKA 148
                                                 L +      I+I      +   
Sbjct: 140 LVFRGGILLITKGVTISPLHQDFGIIGQGYIPPSLSIALGVIASLAYIIIDINNRKSRIK 199

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                  L    + +  +I      +  +I    +   +L +  L   +      T    
Sbjct: 200 YGLSVPSLSIEISKIIGVIALIALFTGVMISYEGIPVPVLIVLVLVLVLTFVANNTTFGR 259

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N++A       ++   ++ F +      +AG    +  +  +       E   
Sbjct: 260 YVYAIGGNKEAAIYSGINVVKTNMTIFLIMGILSAIAGIVLTSRLNAATTSAGNLFELDA 319

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + S +I     LGG  ++        I+  +      MN  Y    +       +    
Sbjct: 320 IASAIIGGASTLGGEGTVPGAILGALIMASIDNGMSLMNIDYSILTIVKGLVLVIAVWV 378


>gi|328544750|ref|YP_004304859.1| ABC branched-chain amino acid transporter, permease protein
           [polymorphum gilvum SL003B-26A1]
 gi|326414492|gb|ADZ71555.1| ABC-type branched-chain amino acid transport system, permease
           component protein [Polymorphum gilvum SL003B-26A1]
          Length = 287

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 89/304 (29%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       ++  +F+ GLSI +G +  ++L        G Y  V+L +R+G+   L +P 
Sbjct: 8   VVDGIAYGMLLFLFSIGLSITLGLMRFVNLAHGAFAMCGGYVAVMLLNRFGVPFLLTLPA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +G  GM+     ++       +  ++ S            I  G     V      
Sbjct: 68  AFVGAGLIGMVAERTVIRHVYGMPELRQVLFSIGLAFAAGAIANILFGPQQQPVLLPA-- 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                       R     V   ++  +V          +      T      R   D+++
Sbjct: 126 --------ALTMRIEVFGVGTTVYRLFVTFCGIVAVVGLTYLFNNTRFGAKVRAAVDSRR 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +    L   A                        F F   +IV+ +V++GG 
Sbjct: 178 TAEGIGINVDR--LFVMAFGLGAAFAGLGGALGVGIVGLDPSFPFKYLVIVLMVVVIGGP 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+     A   L     +   +     +               ++   L LV++     
Sbjct: 236 GSILGSFAAANFLGVTDAVFKYLVPEVGS--------------FVIYGLLVLVLIFFPKG 281

Query: 339 LLRL 342
           L   
Sbjct: 282 LAGR 285


>gi|260466998|ref|ZP_05813179.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
 gi|259029198|gb|EEW30493.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
          Length = 353

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 86/297 (28%), Gaps = 22/297 (7%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
              +   + S+ I  +  ++ A G + V+   G + L+      + A       +  G +
Sbjct: 59  FVLNPFNLQSIAIFAVAPLLLATGQTFVI-ISGGIDLSLGFIMGLAAVIAAHATNMAGAA 117

Query: 92  IWLLIPV-SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           I L + + + +++      +           L +   I +     +      +  G    
Sbjct: 118 IPLPLAMLAGILAAVIVAGVPGVINGLLISRLRVPPFIGTLGMFGVARGAAFLLAGGT-- 175

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                           ++   F          + Y+++        +   L +T      
Sbjct: 176 -------------TVPVQNSWFALLGNGKFHGVPYLVMIAAVFVVVMHYLLSQTRFGQHN 222

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N +A       I    L  + +S+   G+ GA +AA     +    +      V 
Sbjct: 223 YAIGANVQAARRAGIDIRGHILRLYVLSAMCAGLGGALYAARFTAGAAQAGEPLLLDSVA 282

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           ++VI      GG  ++        ++  +      +N   F   +       +    
Sbjct: 283 AVVIGGASLFGGSGTIFGTVAGALVIAVIQYGLVFVNVEPFWQFIAVGIVIIISVLI 339


>gi|302546875|ref|ZP_07299217.1| ribose ABC transporter, permease [Streptomyces hygroscopicus ATCC
           53653]
 gi|302464493|gb|EFL27586.1| ribose ABC transporter, permease [Streptomyces himastatinicus ATCC
           53653]
          Length = 337

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/316 (12%), Positives = 83/316 (26%), Gaps = 26/316 (8%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
              VV  + L    G     +    +        + A G+++V+   G + ++   A A 
Sbjct: 34  AAIVVLYIALSASAGGFLDTQNQLGILRDAASVGIPALGVTLVI-IAGEIDISIGPAVAF 92

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
            +  +    S + L I   + ++ +                       A    +   +  
Sbjct: 93  ASVIFAKGASEWHLGIAGALALTLVAGI--------------------AWGAFAGWLRAR 132

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
                 I        +     +    +   +    F  S     + +    +    L   
Sbjct: 133 FAVPSFIATLGLWSALGGLALYATDALPVPLPASSFIDSLGGKFLGVPTPAVVFIVLFFV 192

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
                RRTA   +      N  A       I   +++ FA +     + G   AA     
Sbjct: 193 FWYLARRTAYGRSVYATGGNAAAAQLAGIPIRRIRVTLFATTGVLAALTGILLAARLGSG 252

Query: 257 SPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
           +       E  ++ ++VI      GG  SL         +  +      +    F   + 
Sbjct: 253 NGGAAAGLEFDVIAAVVIGGTALAGGRGSLIGTMLGVIFISVIANGLVLLGVNPFLQNVV 312

Query: 312 FDCSFNMRHTTLMVIA 327
                       ++I 
Sbjct: 313 RGVIIVAAVLANVIIG 328


>gi|212710468|ref|ZP_03318596.1| hypothetical protein PROVALCAL_01530 [Providencia alcalifaciens DSM
           30120]
 gi|212686888|gb|EEB46416.1| hypothetical protein PROVALCAL_01530 [Providencia alcalifaciens DSM
           30120]
          Length = 329

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/321 (12%), Positives = 98/321 (30%), Gaps = 20/321 (6%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            LR    +  L  + +V  +   L      + + +  +     +  +FA GL  VV   G
Sbjct: 6   KLRPQSVEGWLIWVILVMVVFFTLMSPQFLTIQNLLDLSESYAVTGIFALGL-FVVLVTG 64

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYG-LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
            + ++     ++  Y       +    S  L I ++ +I    G+I  +         + 
Sbjct: 65  GIDISFAAVASVVQYVIATFLLQGLLESPTLSIALAIVIGITFGLINAILIYSLNVVSII 124

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           I   + S +F  ++      +      +  D +  L   V         P   ++   F+
Sbjct: 125 ITISMQSLLFGMLMWLTNGHSIYDLPDWWVDPVTILPFEVDGEYYQIGLPLVVMLGIAFL 184

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
            ++L+              +T I      +  +Q++   +   +    L A+    A   
Sbjct: 185 TWILM-------------NKTHIGRQLYAVGGSQESASRIGIRVWVIYLFAYGYLGAMAA 231

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELC 298
           + G         + P      E  ++ + V     + GG  S+        ++  +    
Sbjct: 232 IGGMLQTYRMSEVVPSALVGGELDVLAAAVLGGASLSGGRGSVIGTLMGVFLIGILKNGL 291

Query: 299 CGMNFYYFNSLLKFDCSFNMR 319
             +    +   +       + 
Sbjct: 292 NLIGVSNYFVNIVIGMVILIA 312


>gi|160898467|ref|YP_001564049.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160364051|gb|ABX35664.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 305

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 97/308 (31%), Gaps = 23/308 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS-----YVILGSRYGLSIW 93
           + +      IY + A G S++ G L ++  +      +  +        +  +  G + W
Sbjct: 9   LINWLTLGCIYSLLALGFSLLFGVLQVIHFSHGDVAMVAPFIALAAVQALAAALGGAAPW 68

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L++ ++ +++ A    +G+   +        A  +M  +    L            +   
Sbjct: 69  LVLGLACLVAIAAVGGLGVALDRLVISRFRNAPAMMPLVATVALGIVIRE------LIRH 122

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                        I     P+ F    +     +L    L   ++  L  T +    R +
Sbjct: 123 LYPQGSNPHAFPAIAQGAVPTPFGPLPLISVVSVLVAVALVGVLLYALHHTPMGMRIRAV 182

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             +++     +        + F ++SA   + G F A+    +    F     +I  S  
Sbjct: 183 SQDRETARLFSIAPGPVFRNTFFIASATGAVGGIFLASYAGVV-RFDFGVQAGLIGFSAA 241

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           ++GG+  L      + ++  +  +  G              +        +   + LV++
Sbjct: 242 VVGGLGRLGGAIVGSLLIAAIETIVQGYVP-----------NGTSYRLVFVFALVILVLI 290

Query: 334 MRSHSLLR 341
            R   L  
Sbjct: 291 FRPAGLFG 298


>gi|293417016|ref|ZP_06659653.1| xylose ABC transporter [Escherichia coli B185]
 gi|291431592|gb|EFF04577.1| xylose ABC transporter [Escherichia coli B185]
          Length = 393

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSTAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|225414532|ref|ZP_03761721.1| hypothetical protein CLOSTASPAR_05755 [Clostridium asparagiforme
           DSM 15981]
 gi|225041955|gb|EEG52201.1| hypothetical protein CLOSTASPAR_05755 [Clostridium asparagiforme
           DSM 15981]
          Length = 293

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 102/299 (34%), Gaps = 26/299 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               L+  + A G+S++V   G ++      Y +GAY    + S   L   + + V  ++
Sbjct: 16  LSSGLMTYLTASGMSLIVAGTGNINFGQGAFYIVGAYICYYVTSAG-LPFGVALLVGMLV 74

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
            GA G ++ +      G  +  + LIM      +      I   K               
Sbjct: 75  PGAVGALLEIVLRPVHGKDMTFSWLIMLGFSYIMCDVLVFICGYKVRATPIPAFLKGVVR 134

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           V S           + + I+  + +     +   + + L  + +   +R I  ++K   +
Sbjct: 135 VES---------LGLAFPIYYLFTIAISLAIGVILWVVLNYSKLGMYFRAIISDRKMVEN 185

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L   +    ++ F + +   G+AGA  A             +    V+  + +GGM ++ 
Sbjct: 186 LGINVNLLYIAMFMIGTGLGGVAGALNAPISGI--SPKAGLTVFASVMPALQIGGMGNMK 243

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
               A A L  +  +   +   Y+N +                  + +++  + H L  
Sbjct: 244 GCLPAAATLGVITGIASLVIPTYYNCVAS--------------ACMVIILFFKPHGLFS 288


>gi|217968046|ref|YP_002353552.1| sugar ABC transporter ATPase [Dictyoglomus turgidum DSM 6724]
 gi|217337145|gb|ACK42938.1| Monosaccharide-transporting ATPase [Dictyoglomus turgidum DSM 6724]
          Length = 327

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/297 (10%), Positives = 87/297 (29%), Gaps = 23/297 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++  +  L L L      +   I ++        +  +G+ +V+   G + L+     
Sbjct: 21  ILVILFLLSLFLSLTTETFLTSTNIFNILRAFSWIAISGFGILMVI-ITGGIDLSVGSVM 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      ++          ++    +      +                  LI      
Sbjct: 80  AMAGLITAMMLKANFGVFLSILGGIFIGGLIGFI---------------NGILISKTNLP 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +     +   +   Y     + +    +S     ++   F+   I +  + + +    
Sbjct: 125 PFIATLGTMNIARGFCYGVTGGWPVRDLPKSFNFLGQYDVPFLGVGIPLPVIFMIILG-- 182

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               ++L RT+       +  N++A           K+  + +      + G    A   
Sbjct: 183 VITSIFLNRTSWGYKIYAVGGNEQAARLSGINTGRIKILVYTLCGVLTAIGGILMTARLG 242

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
             +P      E  ++ + VI      GG  ++  +    AI+  +      + F  +
Sbjct: 243 VAAPTAALGYELDVIAAAVIGGASLAGGEGTVLGVIIGAAIMQVLRTGMVLLGFPAY 299


>gi|308186754|ref|YP_003930885.1| ABC transport system, permease protein [Pantoea vagans C9-1]
 gi|308057264|gb|ADO09436.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 338

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 92/306 (30%), Gaps = 27/306 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
             +  +     + A G+++V+   G + L+     AI   +   L        ++++   
Sbjct: 57  IDILNRASPVALLAIGMTLVIA-TGGIDLSVGAVMAIAGATAATLTVAGHGVPFIILCTL 115

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                                 L    L+     Q  +     +  G+    +  +   +
Sbjct: 116 GTGLACG---------------LWNGVLVALLRIQPFVATLILMVAGRGIAQLITQGQIV 160

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                SL  F       +   +++  V+        ++ L  R+TA+      +  N +A
Sbjct: 161 TFDSDSLGWFGNGSLWMLPVPVWITLVVA------LAVWLLTRKTALGLFIEAVGINLRA 214

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +   T     +S +A+S     +AG   AA       +       +  I  V++GG  
Sbjct: 215 ARNAGVTGWLVVMSTYAISGVCAAVAGLIVAADIRGADANNAGLWLELDAILAVVIGGA- 273

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
                       + +  +   +       +L       +      V+ + +++L     +
Sbjct: 274 ----SLMGGRFNLVLSLIGALIIQSMNTGILLSGFPPELNQVVKAVVVMCVLLLQSPRFI 329

Query: 340 LRLRTP 345
             L+  
Sbjct: 330 AMLKRR 335


>gi|300311740|ref|YP_003775832.1| sugar ABC transporter permease [Herbaspirillum seropedicae SmR1]
 gi|300074525|gb|ADJ63924.1| ABC-type sugar transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 379

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/331 (11%), Positives = 85/331 (25%), Gaps = 20/331 (6%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +  +  ++ V     L        +   + +         + A    +++   G   L+ 
Sbjct: 38  FASLAGVILVFLVFGLTAGDSGMFNLDGVVNWMQVAAYLGIIAVAACLLM-IGGEFDLSI 96

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +      I    +G   WL +  +   S   G + G   +K R     +    + 
Sbjct: 97  GSMIGLAGMMVAIPTVYFGWPFWLAVLFAFAASMGLGWLNGYLVMKTRLPSFIVTLAFLF 156

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLG--------------TTVRSLIRFFRFPSSF 176
            +    L       N      V +R                    +  +   +    +  
Sbjct: 157 ILRGLTLALSILFANRTIVSGVGERAAHDWLGQLLFSGNVGAGLFSWLARHGWIATVADG 216

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
                 +  V+L    ++ +    L RT + N    +  +  A  ++   +   K+  F 
Sbjct: 217 TPLVTGIPKVILWWAVVALAASFVLARTRLGNWIFAVGGDAVAAKNMGVPVRKVKIGLFV 276

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAIL 291
            ++    +            + D     E   +I+ VI      GG  S+        I 
Sbjct: 277 FTAFCACLFAVLQVGDFGSAAADRGLQKEFEAIIAAVIGGALLTGGYGSVIGACFGALIF 336

Query: 292 IGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
             V       N       +       +    
Sbjct: 337 GVVQIGITYTNLSSDWFRVFLGVMLLVAVLF 367


>gi|170694527|ref|ZP_02885680.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
 gi|170140661|gb|EDT08836.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
          Length = 326

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 98/314 (31%), Gaps = 27/314 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++ V   +   LF     S +  +    Q++  V+   G+++VV   G + L+   + A
Sbjct: 28  IVVLVAMIVFNLLFTPHFVSLQTFNVNLTQVVTIVIVGIGMTLVVA-TGGIDLSVGASMA 86

Query: 76  I-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           I GA + ++  +  G     L     +++ A   +     +        +ATL++    +
Sbjct: 87  IAGAVAPMLFMNIAGPPGIALAFTLPIVAAALCGVFNGLLVTRLRVQPIVATLVLFIAGR 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I       +                           F    +     + + +L M  L 
Sbjct: 147 GIAQVVTDGSLQAFSNP-------------------AFQWIALGKVAGVPFQILLMLALV 187

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     +R+T           N+ A +      +  K+ A+ V +A  G+AG    +   
Sbjct: 188 AVFTWIVRKTLFGKYLLVTGGNEDAAYLSGIPTVRVKMIAYTVCAALAGLAGLISISVNS 247

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
               ++      +  I+ V +GG         ++       I+  +             +
Sbjct: 248 SSDANVIGLGVELDAIAAVAVGGTALTGGKAYITGTLIGALIIQLLRYTLLAHGIPDAAA 307

Query: 309 LLKFDCSFNMRHTT 322
           L+       +    
Sbjct: 308 LVLKAAIIIVAVYV 321


>gi|167905132|ref|ZP_02492337.1| ABC transporter permease protein [Burkholderia pseudomallei NCTC
           13177]
          Length = 323

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 92/311 (29%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 24  VLVLLCVGFGFMTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 82

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S      WL IP +  +  A G++ G      R     +    ++ +     
Sbjct: 83  A-VASLLASNLPGWGWLGIPAALAVGLAFGVVNGGLISFLRLPPFIVTLGALTAVRGIAR 141

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    +G           F        + + ++++    + A  
Sbjct: 142 L--------------------MGNDTTIFNPQLPFAFIGNGSILGVPWLVVIALAVVAIS 181

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +      +  N +A       +   +L  +A S    G+     AA     +
Sbjct: 182 WFILRRTVLGMRIYAVGGNPEAARLSGINVRGIELFVYASSGLLAGLGALMSAARLYAAN 241

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 242 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLSNGLVLLGVSDIWQYII 301

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 302 KGLVIIGAVAL 312


>gi|149189742|ref|ZP_01868023.1| beta-methylgalactoside transporter inner membrane component [Vibrio
           shilonii AK1]
 gi|148836391|gb|EDL53347.1| beta-methylgalactoside transporter inner membrane component [Vibrio
           shilonii AK1]
          Length = 335

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/326 (10%), Positives = 94/326 (28%), Gaps = 13/326 (3%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F+L+  K   I  +L ++  +++     +  S +   ++  Q  + V+ A G++ ++ + 
Sbjct: 7   FALKHLKEGAIYAVLFILLAVIVIQ-EPSFLSLRNFSNILTQSSVRVIIALGVAGLIVTQ 65

Query: 64  GLLSLNCVIAYAIGAYSYV--ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           G   L+      + A      +        ++  I    +++    +      +      
Sbjct: 66  G-TDLSAGRQVGLAAVVSATLLQSVDNVNKVFPSIGEVPIVAVILVVCAIGAIIGLVNGI 124

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           +     +   I     +      N      V            S+            +  
Sbjct: 125 IVAYLKVTPFIATLGTMIIVYGINSLYYDSVGASPIAGFDERFSVFTQGFIRMGDFRFSY 184

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +Y ++ +      + +   +T        +  N +A       +    L  +A+S  F
Sbjct: 185 ITFYAIIAI----IFMWILWNKTVFGKNIFAVGGNPEAAKVSGVNVPMTLLKVYALSGVF 240

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
               G   A      + ++    E   + + V+      GG+ S++ +     I   +  
Sbjct: 241 YAFGGMLEAGRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINY 300

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               +    +   +            
Sbjct: 301 GMTYIGVSPYWQYIIKGSIIIFAVAL 326


>gi|121603462|ref|YP_980791.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120592431|gb|ABM35870.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 293

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A ++V L  R           
Sbjct: 8   LIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGSMVLFAALTFVSLHERGMPFWLAFAVT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A +     ++  L              +    +   I    + +               
Sbjct: 68  LAAMVAIALLVERLVLRPLVNRSPITLFMATLGLSYMIEGAAQALWGA------------ 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         V+   F  +       L  ++ L   +T I  + R + D+  
Sbjct: 116 QVHGLELGISDEPLALGGVLLSQFDLFAAGTAAVLVTALSLLFSKTRIGLSLRAVADDPL 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +       +AV+     +AG  + A               +  + ++I+GG 
Sbjct: 176 AALAVGIRLQRIWAVVWAVAGFVGLVAGLLWGARLGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S+        I+    +L            L+              +   L +L+R   
Sbjct: 233 SSIGGAIVGGLIIGASEKLAEIYLGPVIGGGLENWFP---------YVLALLFLLVRPAG 283

Query: 339 LLRLR 343
           L   R
Sbjct: 284 LFGER 288


>gi|323939531|gb|EGB35739.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli E482]
          Length = 393

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 52/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     SE   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNISELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|160938406|ref|ZP_02085761.1| hypothetical protein CLOBOL_03304 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438779|gb|EDP16536.1| hypothetical protein CLOBOL_03304 [Clostridium bolteae ATCC
           BAA-613]
          Length = 322

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 90/262 (34%), Gaps = 21/262 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             L+  ++  +     G+  +QK I ++  QI   +  A G+++V+  LG + L+     
Sbjct: 22  ALLILCIFLSVFPKTSGSFLTQKNIFNVLRQISSNLFLACGMTMVI-ILGGIDLSVGSII 80

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+         SRYGL I + +    ++    GM  G+   K           I++    
Sbjct: 81  ALSGCFAAGCVSRYGLPIAVGVLGGVLVGTVVGMFNGVVISKTTIPPF-----IVTLATM 135

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           N+      +  G + + V  +                +      Y   +   ++ +  + 
Sbjct: 136 NVAKGLAYVYTGGSPVRVVTKE---------------WQFLGAGYVGGVPTPVILLAVVL 180

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + + +T +      +  N +A      +    K      S    G+AG   A+   
Sbjct: 181 VITAIIMNKTKLGRHIYAVGGNSQAARFSGISTAKVKFLVHTYSGIMAGLAGVVLASRMY 240

Query: 255 RISPDMFKFSENIIVISIVILG 276
              P     +E   + ++V+ G
Sbjct: 241 SGQPTAGDGAEMDAIAAVVVGG 262


>gi|160941559|ref|ZP_02088891.1| hypothetical protein CLOBOL_06457 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435524|gb|EDP13291.1| hypothetical protein CLOBOL_06457 [Clostridium bolteae ATCC
           BAA-613]
          Length = 320

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/292 (11%), Positives = 87/292 (29%), Gaps = 27/292 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L+ +V  +   +   +  S   + ++  QI +  +   G++ V+   G + L+      
Sbjct: 19  VLILLVICVFATILSPSFLSVANLFNVFKQITVAGIVGCGMTFVI-LTGGIDLSVGSILG 77

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +              +    I V+  +   CG + G                +M+ +   
Sbjct: 78  LAG-VLASGILESTGNAGAAILVALAVGIGCGAVNGFFVAVCEIPPFISTLGMMTLLRGC 136

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           IL+                            I+   +          +   ++ +  L  
Sbjct: 137 ILV--------------------YTKGSPIPIKVDAYKFFGKGTVAGVPVPVIILIILFL 176

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L +T+   +      N++A      ++ F +  A+ ++    G+AG    A    
Sbjct: 177 IAHYVLTQTSYGRSIYAFGGNREAARLSGISVRFTEWMAYTLNGLMCGVAGVILTARLGS 236

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
                    E   + ++++      GG+  +        I+  +  +   MN
Sbjct: 237 AQSTSGTGIEMDAIAAVILGGTSLSGGVGFVLPTVVGAMIMGIIDNILTLMN 288


>gi|86360003|ref|YP_471893.1| putative sugar ABC transporter, permease protein [Rhizobium etli
           CFN 42]
 gi|86284105|gb|ABC93166.1| putative sugar ABC transporter, permease protein [Rhizobium etli
           CFN 42]
          Length = 352

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/322 (11%), Positives = 96/322 (29%), Gaps = 12/322 (3%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
               + +L  +  +   +   A  +   + S+   + +  +   G+++ +   G   L+ 
Sbjct: 34  RAGAVFILLALLVVGFTIAQPAFINFANLMSILQAVSVVAILGAGVTVTLAVGG-FDLSI 92

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A    +       +G  ++  +P+        G++  L  ++ +   L +ATL M 
Sbjct: 93  GAVAASSVMAASYAMIVWGFDVYATVPLVLAFGAVVGLVNALLIVRLKVPDL-LATLAMM 151

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +   + +      +  +G+ + D      +                     +   +L M
Sbjct: 152 FLLSGLQLIPTAGRSISSGLTLPDG-----SKATGAYDPAFLLIGRYSILGTLPVSVLLM 206

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++ ++ +   RT I         N+ A      + +  K  A+ +S     + G   A
Sbjct: 207 ATVAVALFVLTERTRIGRLLFATGGNELATRLAGASTVRLKTLAYVISGTLASLGGIVIA 266

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSL-----SKIAKATAILIGVVELCCGMNFYY 305
           A   R             V + +I   + +L              +  ++     +N  Y
Sbjct: 267 ARVGRGDVSSGGSLLMDSVAAALIGFAVLNLRRPNVLGTIAGAVFVGVLLNGLTMLNAPY 326

Query: 306 FNSLLKFDCSFNMRHTTLMVIA 327
           +                   + 
Sbjct: 327 YTQDFVKGAVLVGALALTYGLG 348


>gi|298242194|ref|ZP_06966001.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963]
 gi|297555248|gb|EFH89112.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963]
          Length = 423

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/290 (12%), Positives = 86/290 (29%), Gaps = 6/290 (2%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +       +  ++   L          +M   IL+  +  +   I +  L + S   V  
Sbjct: 96  LSLAAVGTFAAVVTGVLSTRLGVDPYVAMAAGILVGALAGFINGIFIAVLRVPSF-IVTL 154

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
                Y+ ++L    G S  ++     +             L      + +      +I 
Sbjct: 155 AGSIGYAGLLLYLLNGQSTLIVHDPVIVSIAGTPFSFLPDWLGVGAPTVILILYAAWQII 214

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
           + +  K + +        VA+           +      P       + +   +     +
Sbjct: 215 EQMRRKQQGLRVKSTLSLVANIAIPFVIVEGVIAVLENTPGPVNGTFLGVPNSVAIFFGM 274

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              + L + +T        +  N +A       ++F ++  F + SAF  + G   A+  
Sbjct: 275 LLVMWLIMTKTRFGRHVYAVGGNMEAARRAGINVVFIRIVVFTLCSAFAALGGILAASRA 334

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
             ++  +        + + VI      GG  ++  +     I+ G+    
Sbjct: 335 TAVASAVSPTLTLQAIAAAVIGGVSLFGGRGTVWAVVLGALIIGGLENGL 384


>gi|253579529|ref|ZP_04856798.1| ribose ABC transporter [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849030|gb|EES76991.1| ribose ABC transporter [Ruminococcus sp. 5_1_39BFAA]
          Length = 325

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 92/317 (29%), Gaps = 22/317 (6%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              + C+L +++ +   +          I S    +      + G++ V+   G +  + 
Sbjct: 17  RILLACILVLMFVVFKVVLGSKFPVGDSIKSTLNYVYFLGFLSLGVTFVIA-TGGIDFSI 75

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                  A       + Y +     + +  +I  A G+  G         Y+++   I+S
Sbjct: 76  GPVMFCCALISGYCMTSYHVPCAAAMVICILIGFAFGVFNGWMV-----SYMSVPPFIIS 130

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
               NI      +      +        +    R+LI +  FP   VI+        + +
Sbjct: 131 MASMNIAKGIASVFTKTQSVSWPLGSDPVNGWFRNLISYKGFPVGLVIFLAAAVICGIIL 190

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                        T        +  N +A           ++ A+ +    +G+   FF 
Sbjct: 191 -----------YNTKPGRYILCLGSNSEAVRLSGVNTKKWRMLAYVICGVLVGIGAIFFV 239

Query: 251 ASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
            +   + P       N  +   V+     +GG+ S+        I+  + +         
Sbjct: 240 GAYTTVQPGYGDQYNNEAIAGCVMGGTSMVGGLASIGGTVIGVFIISLLQQGIMAFGLGK 299

Query: 306 FNSLLKFDCSFNMRHTT 322
              ++       +    
Sbjct: 300 GQQMIITGLIVIVAVYV 316


>gi|187922964|ref|YP_001894606.1| sugar ABC transporter ATPase [Burkholderia phytofirmans PsJN]
 gi|187714158|gb|ACD15382.1| Monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
          Length = 337

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 87/288 (30%), Gaps = 12/288 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   ++  L      +   + ++  +     + A G++ V+   G + L+     A
Sbjct: 27  LVGLIALCVIGTLLNRDFATVDNLMNVLTRTSFIGIIAVGMTFVI-ISGGIDLSVGSMAA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + A S + L +     +        MI     +   +    F   +  + T    E F  
Sbjct: 86  LIAGSMIWLMNGLAAGVGGHAFPPLMILTLGIVGALMLGGLFGCAHGLLITKGRIEPFIV 145

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L            +     L    +        +      V   I+++ V+       A
Sbjct: 146 TLGTLGIFRAVLTWLADGGALTLDNSLSDLYGPVYYASLFGVPVPIWVFLVVA------A 199

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              L L RTA     + I  N++        +   K+  + +    +G+A   +      
Sbjct: 200 GGALILNRTAFGRHVQAIGSNEQVARYAAIRVDTVKIVTYVLLGICVGVATVLYVPRLGS 259

Query: 256 ISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELC 298
            +P      E   + S+V+      GG   +        +L  +  + 
Sbjct: 260 TTPTTGLLWELEAIASVVVGGTALKGGEGRVIGTVIGAILLSVIANIL 307


>gi|327193811|gb|EGE60688.1| ABC transporter, permease protein [Rhizobium etli CNPAF512]
          Length = 441

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 97/324 (29%), Gaps = 34/324 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + V + LL      +        ++  +I I  +   GL ++    G + L+     
Sbjct: 130 LIAVFVFFALLGGKVFLSAAGYASWLNVAAEIGIVAL-PIGLLMI---SGEMDLSIGAVI 185

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              + +  I+   YGL   + I     +    G+  G    + R   L   T+       
Sbjct: 186 PASSLTVAIISGHYGLPEIVGISAGLGVGLLVGLFNGYLVNRTRVPSLI-VTIGSMFAVM 244

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + + +  +  G  G+ +              ++         ++++ +++ LL      
Sbjct: 245 GLTLGFTVLIAGSTGVSLVPSPA---------VKAILGDFIGGMFQVTIFWWLLFAAAFF 295

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + +    + + N    +  ++ +  +         ++ + +S       G        
Sbjct: 296 CLLHI----SPVGNWIFALGGDKVSARNAGIPTEKLTIALYMLSGFSAAFVGVSQVLVYQ 351

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                  +      ++ +VI      GG  S+  I   T     V +            +
Sbjct: 352 SAQVLGGQSFIFNSIMCVVIGGVLLTGGAGSVVGIVFGTLTFAIVNQ-----------GI 400

Query: 310 LKFDCSFNMRHTTLMVIALFLVIL 333
                  N+    +  + L  V++
Sbjct: 401 YFTGIDPNLGSVIIGALLLLAVMM 424


>gi|256042953|ref|ZP_05445899.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Brucella melitensis bv. 1 str. Rev.1]
 gi|260564187|ref|ZP_05834672.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1
           str. 16M]
 gi|265989386|ref|ZP_06101943.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1]
 gi|260151830|gb|EEW86923.1| bacterial inner-membrane translocator [Brucella melitensis bv. 1
           str. 16M]
 gi|263000055|gb|EEZ12745.1| inner-membrane translocator [Brucella melitensis bv. 1 str. Rev.1]
          Length = 316

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/317 (15%), Positives = 103/317 (32%), Gaps = 19/317 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I  L+  M + GL+++ G +G+L+      Y +GAY    L    G  + +LI  
Sbjct: 8   VLNGAIYGLLLFMVSAGLTLIFGMMGVLNFAHASFYMMGAYFAYTLQPLTGFWLAILIAP 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +       ++    +  R      A  ++     +++I                  + 
Sbjct: 68  VIVGIVGIVGVLVERFILRRVHAFGHAHELLVTFGLSVVIAEVIKIFYGN--------FA 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + + ++F  F    V Y  +  ++      +   I L L RT I    R+     +
Sbjct: 120 VEYRIPAALQFSAFDLGGVSYPFYRLFIGAVALVMFLLIYLLLTRTRIGIVVRSAIYRPR 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-----------FKFSENI 267
              +L   +    +  F V +   G+AG+   A                           
Sbjct: 180 MVEALGHNVPLVFMGVFGVGAFLAGLAGSVAGAFYTTNPNMALELGVMVFVVVVVGGLGS 239

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  ++     +  LS +A    + I  +    G+  Y            +    TL    
Sbjct: 240 LGGAMFASLLIGILSSVAVGVKVSIASLLDYVGLGDYAREIGGVLTLEVSSIAATLPFFL 299

Query: 328 LFLVILMRSHSLLRLRT 344
           + +V+L+R   L   + 
Sbjct: 300 MLIVLLVRPSGLFGAKE 316


>gi|167758513|ref|ZP_02430640.1| hypothetical protein CLOSCI_00853 [Clostridium scindens ATCC 35704]
 gi|167663709|gb|EDS07839.1| hypothetical protein CLOSCI_00853 [Clostridium scindens ATCC 35704]
          Length = 350

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/319 (10%), Positives = 91/319 (28%), Gaps = 10/319 (3%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            ++ +V  +   +      S   + ++   + +Y + A G++ V+   G + L+      
Sbjct: 22  FIVLIVLLIFFSITADNFLSAGALLTVAKHVALYGILAIGMTYVI-ITGGIDLSVGSVAG 80

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L  +        + +   +     +   +      G    I     +     
Sbjct: 81  LAGMIAGGLIQQGLTLKMFGVTLYFSVPMIVLIT--VLLGALMGMINGIVITKFNVAPFI 138

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             +    I  G A I      +   +    L           +    +   +L +  ++ 
Sbjct: 139 ATLGTMYIWRGFANIRSNGATFSELSGSEGLGNTGFEIFGRNLGGTSIPCGVLILAIIAV 198

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              L L++T       +I  N++A       +   K+  +A S     + G    +    
Sbjct: 199 IAGLILKKTPFGWHVLSIGGNERASKLSGIKVDKVKIWVYAFSGFCSAIVGIIATSQLVS 258

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
            +P   +  E   + + V       L   + A  +      +         N  +     
Sbjct: 259 ATPKTGESWEMNAIAASV-------LGGTSMAGGVGTIGGTIVGAFVIGVINDGMTMCGV 311

Query: 316 FNMRHTTLMVIALFLVILM 334
                  +  + + + +++
Sbjct: 312 TEFWQKIIRGLVIIIAVII 330


>gi|164687670|ref|ZP_02211698.1| hypothetical protein CLOBAR_01312 [Clostridium bartlettii DSM
           16795]
 gi|164603444|gb|EDQ96909.1| hypothetical protein CLOBAR_01312 [Clostridium bartlettii DSM
           16795]
          Length = 311

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 83/272 (30%), Gaps = 10/272 (3%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G++++       IGA+           + WL +  + +  G   +I G+ ++ F  D+ 
Sbjct: 31  SGIVNIGLEGMMTIGAFVGA-TAGYLTGNPWLGLLCAGIAGGIFALIHGIATISFNADHT 89

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
                I        L   K + NG            +   +  +        +       
Sbjct: 90  ISGVAINLLAPGVALFACKILFNGSVTTPTIAMENKIPRPLNGVFESGSILDTIFNTYAT 149

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y  L  +  +   +     +T      R + ++  A  +L   +   +  +  +S    
Sbjct: 150 TYIALALIVVVWFVLY----KTKFGLRVRAVGEHPGAADTLGINVSRVRYISVILSGILA 205

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+ GA  + +            +  I ++ VI G                 +     G+ 
Sbjct: 206 GIGGASMSLAIVSTFRPALISGQGYIALAAVIFGKWRPQW-----AGAACLLFGFSTGLT 260

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
            Y  N  L    + N+      ++ L +++L 
Sbjct: 261 VYLGNPSLGMTINENLLSMLPYIVTLVMLVLF 292


>gi|90412426|ref|ZP_01220430.1| putative sugar ABC transporter (permease) [Photobacterium profundum
           3TCK]
 gi|90326688|gb|EAS43087.1| putative sugar ABC transporter (permease) [Photobacterium profundum
           3TCK]
          Length = 338

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/313 (9%), Positives = 90/313 (28%), Gaps = 15/313 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + +   +++ +      +   + ++  Q+    + A G++I++     + L+     
Sbjct: 27  IYFVFIAMCIVMSILSPVFLTVANLLNVMTQMASIGLLALGVTIII-ITRGIDLSSGSVL 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A              W +     +      + + +         L    LI      
Sbjct: 86  AVAAVVSASTAQSLD---WGMRMYPNLPELPIIVPILVALAVGALCGLINGALIAYTGIP 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +     +   +    +      + + + S     +   + V   + ++ V+  + ++ 
Sbjct: 143 PFIATLGMMIIARGAALLYSDGRPVSSLIESYQWIGQGTIANVPVPVVIFLVMAFITYVL 202

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                    T        I  N+ A +     +   K+  +  +    G+A     A  +
Sbjct: 203 L------NYTRFGKYAYAIGGNETAAYVSGINVTKYKILVYVYAGLLAGIAALILTARIN 256

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P +    E   + S  +      GG+ ++        I+  +      +N   +   
Sbjct: 257 SGQPGLGVMYELDAIASATVGGVSHAGGIGTIQGTIVGVMIMGVLQNGLDLLNVSAYWQQ 316

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 317 VVKGLVIVVAVIF 329


>gi|54307677|ref|YP_128697.1| putative inner membrane permease of D-xyloseABC transporter
           [Photobacterium profundum SS9]
 gi|46912100|emb|CAG18895.1| putative inner membrane permease of D-xyloseABC transporter
           [Photobacterium profundum SS9]
          Length = 391

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/359 (11%), Positives = 101/359 (28%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           ++  +  ++ ++      +   +  S + I ++  Q  I  + + G+  V+   G + L+
Sbjct: 26  QFIVMAAVIVIIMLFFSVMTEWSYLSPRNISNLFRQTAITGILSIGMVFVI-ISGEIDLS 84

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +      IL   +GL + L I ++ +     G+  G      +     +    M
Sbjct: 85  VGSMMGLLGGVAAILDVWFGLPLPLTIVLTLIAGFLLGLWNGWWVAYRKVPSFIVTLAGM 144

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV--- 186
                 ++      T       +         +   ++      S ++ ++     +   
Sbjct: 145 LAFRGILIGITDGTTVAPTSQAMGFIGQSYLPSWFGMLLGVGSLSLYIYWQQRRRSMRQQ 204

Query: 187 --------------------------------------LLGMCFLSASIILWLRRTAISN 208
                                                 +L +            +T +  
Sbjct: 205 YNLPVPMASTSLVKQAAVGVAVLSIILVLNDYRGVPTPVLLLVTFLIVGSFIASKTRLGR 264

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N +A       +   KLS FA+S   + +A    ++     SP     +E   
Sbjct: 265 RVYAIGGNIEASRLSGINVEKTKLSVFAMSGFLVAVAALILSSRLGAGSPSAGNIAELDA 324

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + VI      GG+ ++        I+  +      M+   F   +       +    
Sbjct: 325 IAACVIGGTSMAGGVGTVIGAVIGAFIMASLDNGMSMMDVPTFWQYIVKGGILLLAVWM 383


>gi|331685231|ref|ZP_08385817.1| xylose transport system permease protein XylH [Escherichia coli
           H299]
 gi|331077602|gb|EGI48814.1| xylose transport system permease protein XylH [Escherichia coli
           H299]
          Length = 393

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQSLTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|301061420|ref|ZP_07202190.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
 gi|300444459|gb|EFK08454.1| amino acid or sugar ABC transport system, permease protein [delta
           proteobacterium NaphS2]
          Length = 329

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 88/292 (30%), Gaps = 2/292 (0%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
           A +  LL    +          +     ++  + A G+SI+ G + +L+      +A GA
Sbjct: 18  AGILFLLPLFGIEPKTYLTLTIAGLAMGMLLFLVASGVSIIFGLMDVLNFAHGALFAWGA 77

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL-AIATLIMSEIFQNIL 137
           Y    +       +     +  +      +   + ++   G  L       +       +
Sbjct: 78  YVGFTVFQFMMPWVEAHSVLQNVAVFLIAVAAAMAAVAVLGIILERFVVRRVYGNHLFQI 137

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +     T     +                     +    VI   +    +L    +   I
Sbjct: 138 LITFGTTIVLVELIRVFWGPNDEVMTVPFTFSGNWDIMDVIVSRYRIICILIGAAVYGVI 197

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
            L L++T +    R   +++    ++   I       FA  +    + G   +    ++ 
Sbjct: 198 QLILKKTKLGTIVRAGVEDRDMVQAMGHNIYLLFTGVFAAGAGLAALGGVAMSIFSLQVY 257

Query: 258 PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           PDM   +  +    +VI+GG+ S++       I+         +  +     
Sbjct: 258 PDMGG-TYLLFAFIVVIIGGLGSVTGSLVGALIVGLSYNYVAYLVPWAAAGA 308


>gi|297158063|gb|ADI07775.1| putative sugar ABC transporter permease protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 458

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 85/270 (31%), Gaps = 3/270 (1%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           +  Q   Y + A  ++I    + L ++     Y + A +  ++G+   L   L I +  +
Sbjct: 144 IVNQASSYYLAALAVAIGF-RMNLFNIGVDGQYRVAAMAAALVGANVDLPGPLSIALIVI 202

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           ++   G      +   +     ++ ++ + +   I               V  +     T
Sbjct: 203 VAMLVGAFWAGIAGILKTTR-GVSEVVSTIMLNAIATSLIAYLILPEQFGVQPKGSNNLT 261

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
           T       +            +Y  +        +  L L RT      R    ++ A  
Sbjct: 262 TGDLPESSWFPGLHVSDVAGDIYGFVFVAIGCGVAYSLVLGRTRFGFDLRATGASESAAA 321

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           +         L++  +S A  G+AG              F+       I+I +L G  + 
Sbjct: 322 ASGVDAKRMVLTSMLISGAVAGLAGMPVLLGDSHTYSLNFQTGIGFTGITIALL-GRNNA 380

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLK 311
             IA    ++  + +    +++  +   + 
Sbjct: 381 VGIAFGALLIAFLDKASQTLDYNGYEKEIA 410


>gi|222083221|ref|YP_002542624.1| ABC transporter membrane spanning protein (ribose) [Agrobacterium
           vitis S4]
 gi|221738601|gb|ACM39439.1| ABC transporter membrane spanning protein (ribose) [Agrobacterium
           vitis S4]
          Length = 350

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/321 (13%), Positives = 92/321 (28%), Gaps = 10/321 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L  VV    +     +      + ++   ++   M A+   +++  LG + L+    Y
Sbjct: 19  LVLAIVVIAAFVQSQHDSFLGINNLTTLLRSMVALAMIAFAQKLII-LLGEIDLSVGSVY 77

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + + +   L    G   + L  + A++              +      + + I++    
Sbjct: 78  GLTSITMATLWLGGGALPFTLPLIPALLVSLAIAAFVGLLNGWFVVKARLPSFIVTLGML 137

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           N+    + + +       A           S+ +                +++       
Sbjct: 138 NVAEGLQLLISNAQTFTPAYSDPAPPEWELSIFKAIGQAPLLWNIPSATLWLVA----SF 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                   RT        I  N +A       I+  KL  F +S    G+AG    +   
Sbjct: 194 LLFWFIRHRTVFGFRLAAIGGNAEAARIARLPIVKYKLLVFLISGLMAGLAGIVDFSYVG 253

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            + P      +  +V ++VI      GG  ++        +L  +      M    F  L
Sbjct: 254 SVGPRQAGSLQFSVVAAVVIGGASLAGGRGTIVGTLLGAILLSLLTNGLALMGVGSFAQL 313

Query: 310 LKFDCSFNMRHTTLMVIALFL 330
           L                 + +
Sbjct: 314 LFIGIVTIGAVWLDQGSQILI 334


>gi|218707202|ref|YP_002414721.1| D-xylose ABC transporter membrane protein [Escherichia coli UMN026]
 gi|293407191|ref|ZP_06651115.1| xylose ABC transporter [Escherichia coli FVEC1412]
 gi|298382940|ref|ZP_06992535.1| xylose ABC transporter [Escherichia coli FVEC1302]
 gi|300898719|ref|ZP_07117031.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 198-1]
 gi|331665194|ref|ZP_08366095.1| xylose transport system permease protein XylH [Escherichia coli
           TA143]
 gi|218434299|emb|CAR15221.1| D-xylose transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli UMN026]
 gi|291426002|gb|EFE99036.1| xylose ABC transporter [Escherichia coli FVEC1412]
 gi|298276776|gb|EFI18294.1| xylose ABC transporter [Escherichia coli FVEC1302]
 gi|300357637|gb|EFJ73507.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 198-1]
 gi|331057704|gb|EGI29690.1| xylose transport system permease protein XylH [Escherichia coli
           TA143]
          Length = 393

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPTSTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|307318701|ref|ZP_07598134.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|306895728|gb|EFN26481.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
          Length = 320

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/322 (10%), Positives = 94/322 (29%), Gaps = 27/322 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R  K    + L  V+  ++   F     +     ++  Q+ +  + A+G++ V+  LG 
Sbjct: 12  VRPLKQYGGIFLSLVMLCIVFSFFNPRFMTVVNFMNILQQVAVVAIAAFGMTWVI-LLGE 70

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+         +     +  +    A  +    +   L +      ++   
Sbjct: 71  IDLSVGSIIAVAGMVGAQCFAFGMGFVPAIALTLAAGALMGMLNGVLTAKLLLPSFIVTV 130

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                                         +        ++I    + +      + +  
Sbjct: 131 ---------------------ATMGIYRGMVSLPTNGAPAMIENETWTAIGTESFLGLPI 169

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++  +  L     + L +T+          N++A       +   K+  F +S     ++
Sbjct: 170 IIWVVAVLFVINQIVLSKTSFGRRAYLTGGNREAAVYSGIKVDRLKILIFMISGVMAAIS 229

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCG 300
           G   ++       +     E   + + V     + GG+ ++        I+  +      
Sbjct: 230 GVLLSSRLFSAQTNAGMSYELDAIAAAVLGGTSLAGGVGTMVGTLIGALIIGVMNNGMNM 289

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           ++  YF  L+       +    
Sbjct: 290 LSVPYFYQLIVKGLVILVAVWL 311


>gi|284046779|ref|YP_003397119.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283951000|gb|ADB53744.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 409

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/338 (11%), Positives = 96/338 (28%), Gaps = 49/338 (14%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L  VV   +  +      +   + ++ +QI    M + G+ +V+  LG + L+  I  
Sbjct: 41  VILALVVIWTVFTVANDRFLTSTNLVNLALQIAGIGMISVGVVMVL-LLGEIDLSVGIVS 99

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A    +L  ++G   +L I  + ++  A G+  G            +    +     
Sbjct: 100 GLCAAVMAVLNVQHGWDPYLAIAAALVVGAAIGLFQGTIVTALGIPSFVVTLAGLIGWQG 159

Query: 135 NILIKWKP-----------------ITNGKAGI-------------------------YV 152
            +L                         G                               
Sbjct: 160 VLLWVLGDTGTVNLTDPKIIGLAGTFYRGATAWALGAIVVVLFALACINARRRRVKAGVP 219

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
           A     +   V  +        + +  +  +   +L +          +RRT        
Sbjct: 220 AATPLLVALRVIGVAVIVFGVIAVLTDDRGVPLAILILIGTVVIFDYIVRRTTFGRHVLA 279

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +  N++A       +   +++ F +SS      G   A+    ++         ++ I+ 
Sbjct: 280 VGGNEEAARRAGIRVRRIRVAVFMISSVMAACGGILLASRLLAVNQGSGGSDLLLLAIAG 339

Query: 273 VIL------GGMTSLSKIAKATAILIGVVELCCGMNFY 304
            ++      GG  ++        ++  +      + F 
Sbjct: 340 PVIAGTSLFGGRGTVWSALLGALVIGSISNGMDLLAFP 377


>gi|297568092|ref|YP_003689436.1| inner-membrane translocator [Desulfurivibrio alkaliphilus AHT2]
 gi|296924007|gb|ADH84817.1| inner-membrane translocator [Desulfurivibrio alkaliphilus AHT2]
          Length = 296

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 94/309 (30%), Gaps = 26/309 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y  +     +IY + A G +I+  + G+++        +G      +       + L I
Sbjct: 8   QYFFAGITYGIIYAIVAIGFNIIYNTTGIINFAQGEFVMLGGMIS--ISLNAFFPLPLAI 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             + +I+   G ++ +  +++      I  +I++     ++ +      G++   +   L
Sbjct: 66  AGAVLITMMVGALVEVSFIRWLKSPSVIRMIIITIGVSILIREIALHIWGESVRALPYFL 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                                     + +++     +  ++ L+ R T      R    N
Sbjct: 126 ---------GDEITTIQILGARISPQVLWIIGVCTIIVIALSLFFRYTMHGQMMRACAAN 176

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A      +       +F +S+    +AGA  +      +         I   ++ ILG
Sbjct: 177 RTAATLCGISAKNMVTFSFMLSAGIGALAGAVMSPVTY--TEYDIGTGLAIKGFTVAILG 234

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +                                          + +  L L+I +R 
Sbjct: 235 GLGNSM-------------AAVAAGLLLGLLEAFSVTVVPLAYQDVIAITILLLIIFIRP 281

Query: 337 HSLLRLRTP 345
           H L   +  
Sbjct: 282 HGLFGRKDA 290


>gi|239624644|ref|ZP_04667675.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239521030|gb|EEQ60896.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47FAA]
          Length = 334

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 103/289 (35%), Gaps = 22/289 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  L +VY +++    G   +   I+++  +I++Y + A  L+  +   G   L+     
Sbjct: 26  LVCLIIVYSVIVQSRSGNFLTLGNINNVLKEIVVYGILASALTFPL-INGTFDLSIESTC 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+G     +L +     +   +  + ++S     I+G+ +                   +
Sbjct: 85  ALGGTCCALLITDGLFGLKTNLFFAVILSVLICSIVGVANGLLVS--------------R 130

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +  +      +  +     +    + V SL   F++ SS  I  I +   +L + F+ 
Sbjct: 131 TKIDPFIVTLGTQTAVRGIVYIVCNNSAVTSLPDSFKYLSSGKILGISVSIWILILVFVM 190

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +++L   +T+       I  +  A +     +   + S + +S+A   +AG    A   
Sbjct: 191 MALVL--GKTSYGRKIYAIGGSYTAAYISGINVKKIRFSTYIISAALSCIAGILSTARVG 248

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
             +P+       I + +  I      GG      +     ++  +    
Sbjct: 249 SATPNAASGYATIAISACAIGGVALTGGKGLTIGVFLGALMMGMITNGM 297


>gi|167913392|ref|ZP_02500483.1| sugar ABC transport system, membrane protein [Burkholderia
           pseudomallei 112]
          Length = 323

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 92/311 (29%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 24  VLVLLCVGFGFMTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 82

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S      WL IP +  +  A G++ G      R     +    ++ +     
Sbjct: 83  A-VASLLASNLPGWGWLGIPAALAVGLAFGVVNGGLISFLRLPPFIVTLGALTAVRGIAR 141

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    +G           F        + + ++++    + A  
Sbjct: 142 L--------------------MGNDTTIFNPQLPFAFIGNGSILGVPWLVVIALAVVAIS 181

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +      +  N +A       +   +L  +A S    G+     AA     +
Sbjct: 182 WFILRRTVLGMRIYAVGGNPEAARLSGINVRGIELFVYASSGLLAGLGALMSAARLYAAN 241

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 242 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLVGALIIAVLSNGLVLLGVSDIWQYII 301

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 302 KGLVIIGAVAL 312


>gi|325264832|ref|ZP_08131560.1| ABC transporter, membrane spanning protein [Clostridium sp. D5]
 gi|324029821|gb|EGB91108.1| ABC transporter, membrane spanning protein [Clostridium sp. D5]
          Length = 340

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 91/302 (30%), Gaps = 13/302 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
               +  + L+ +   +L+ +  G   +   +  +   +++  MFA     +    G + 
Sbjct: 9   FKSNEIYIFLIIIALGILVQIRSGQFFTGNNMVDLLSAMIVPGMFAVA-EFLAIIAGGID 67

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++     ++ AY+   +         +++     ++    +        F   YL +  +
Sbjct: 68  VSFPALASLSAYASTRILLDQNYDGNVILAFVIAMAIGALLG---AVNGFLIGYLNLNAM 124

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I++    ++   +         + V       G        F    +        + Y  
Sbjct: 125 IVTLGTSSVFQGFMQGALRAKQLSVIP----SGMKEFGTNSFITATNKTNNLTSILPYTF 180

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +  + A +   LR T        I  N  +  ++   +   K   + +        G 
Sbjct: 181 IILLIVCAVMFFILRYTIFGRGIYAIGGNPVSAHTVGFNVKRTKFFMYIIIGMIAAAGGI 240

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
                  ++ P      E  I+  +V+      GG  +L      T ++I V      + 
Sbjct: 241 CRVCMMQQMHPTNMLGMEMNIIAGVVLGGVALTGGAGTLIGCILGTFLIILVQNSMILLG 300

Query: 303 FY 304
             
Sbjct: 301 VP 302


>gi|311109057|ref|YP_003981910.1| inner-membrane translocator [Achromobacter xylosoxidans A8]
 gi|310763746|gb|ADP19195.1| inner-membrane translocator 57 [Achromobacter xylosoxidans A8]
          Length = 304

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 92/309 (29%), Gaps = 15/309 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +  + + GL++V G + +++L     Y +GA+      +  G     L+  
Sbjct: 8   VLNGLQYSALLFLLSAGLTLVFGIMNVINLTHGSFYMVGAFCAASAAAATGSFAAALLAA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A  +    ++  L              L    +          +               
Sbjct: 68  LAGAALYGLVVELLVIRHLYRRDHLDQVLATLGLTLFTNEMVTVLFGRSPPFMDIPPFLS 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +             + Y +     +     ++  + L + RT +    R   D+ +
Sbjct: 128 GSVEILP----------GLNYPLMRLAFIGAGVLVALGLWLLISRTRVGMLVRAGADDGE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       F + +   G AG   A           +      V+ +V    +
Sbjct: 178 MVDALGVNIQRLFTLIFTLGALLCGFAGVMAAPLLAVEIGMGERILITTFVVIVVGG--V 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF---DCSFNMRHTTLMVIALFLVILMR 335
            S+      + ++     L      ++ + LL     D + +   +  + I + +V+L +
Sbjct: 236 GSVRGALVGSLMIGMTDALGRAYIPFWMSRLLPPELSDSASSSLVSASIYILMAIVLLFK 295

Query: 336 SHSLLRLRT 344
              L+  + 
Sbjct: 296 PRGLVPAQR 304


>gi|221195984|ref|ZP_03569031.1| ribose transport system permease protein RbsC [Burkholderia
           multivorans CGD2M]
 gi|221202657|ref|ZP_03575676.1| ribose transport system permease protein RbsC [Burkholderia
           multivorans CGD2]
 gi|221176591|gb|EEE09019.1| ribose transport system permease protein RbsC [Burkholderia
           multivorans CGD2]
 gi|221182538|gb|EEE14938.1| ribose transport system permease protein RbsC [Burkholderia
           multivorans CGD2M]
          Length = 340

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 98/322 (30%), Gaps = 28/322 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           RL     +L +L ++  +  F+  G   + + I  +G Q  I  + A G++ V+   G +
Sbjct: 30  RLVGAVGMLPVLVILCLVFNFMTQGTFFTAENIAIVGQQAAINTVLAAGMTFVI-LTGGI 88

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A  A + ++      L  +  +PV        G+  G+     +     +  
Sbjct: 89  DLSVGSMLATAAMTAMLCSLSPALGAF-ALPVGLATGVVLGLFNGILIAYLKLPPFIVTL 147

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
             ++       ++      G  G  +   L F                    + + +  +
Sbjct: 148 GSLT------AVRGLARLIGDDGTVMNPNLSFAWI--------------GNAHILGVPVL 187

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            +    +       LRRT +      +  N  A       +    L  ++VS    G+ G
Sbjct: 188 AIIALAVIVISWFILRRTVLGIWIYALGGNTAAARLSGIKVSLILLFVYSVSGLLSGLGG 247

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI------LGGMTSLSKIAKATAILIGVVELCCG 300
              AA     +         +  I+ VI      +GG+ S+        I+  +      
Sbjct: 248 VMSAARLYAANGLQIGQGYELDAIAAVILGGTSFIGGVGSIWGTLVGALIIAVLSNGLII 307

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +        +          T 
Sbjct: 308 VGVSDIWQFIIKGLVIIAAVTL 329


>gi|220910897|ref|YP_002486206.1| sugar ABC transporter permease [Arthrobacter chlorophenolicus A6]
 gi|219857775|gb|ACL38117.1| inner-membrane translocator [Arthrobacter chlorophenolicus A6]
          Length = 348

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/330 (13%), Positives = 99/330 (30%), Gaps = 13/330 (3%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           + F   L + +    + AVV  +      G         ++        + A G+S+++ 
Sbjct: 20  NPFQKLLGRPEVGALVGAVVLFIFFSSVSGTFLQPNAFATVLYGASTIGIMAVGVSLLM- 78

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G   L+  +A    A +  +    + ++IW+ + ++  +S   G I G   +K +   
Sbjct: 79  IGGEFDLSTGVAVISSALTASLFSWYFSMNIWVGVLLALAVSLGIGFINGWILVKTKLPS 138

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
               TL    +   + +       G         +    +               +   +
Sbjct: 139 FI-VTLATFLMLTGLNLALTRAIGGGVSSPSIADMDGFDSARAIFASSVTLAGVEIKVTV 197

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
           F + VL+ +            RT + N    +  +  A  ++   +   K+  F      
Sbjct: 198 FFWIVLVAVASWVLL------RTRVGNWIFAVGGDANAARAVGVPVTRTKIGLFMAVGFC 251

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
             + G     + D +       +E + +I+ VI      GG  S    A    I     +
Sbjct: 252 GWVLGMHNLFAFDAVQSGEGVGNEFLYIIAAVIGGCLLTGGYGSAVGGAIGAFIFGMANK 311

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
                 +              +     +++
Sbjct: 312 GIVYAQWNPDWFKFFLGLMLLLATIVNLIV 341


>gi|134281606|ref|ZP_01768314.1| ABC transporter, permease protein [Burkholderia pseudomallei 305]
 gi|134247273|gb|EBA47359.1| ABC transporter, permease protein [Burkholderia pseudomallei 305]
          Length = 292

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 84/289 (29%), Gaps = 15/289 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S      +Y +   GL ++  + G+L+       A+GAY                 
Sbjct: 8   PYLISGLGVGAVYALSGVGLVVLYRASGVLNFAFGATGALGAYVAAACLDADYPQALAWG 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A  + A  +   + + +       +   + +  F  +L+ +     G     +    
Sbjct: 68  AAVAASTAASLVYGLVLAPRLAARE-RVVRSVATLGFALVLLGFCEWYWGDTPRRLVLPT 126

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                    +   +       +    M  + + +            RT +    R + ++
Sbjct: 127 DSEALDFGDVRFTYTRIVGLALACAMMAAIGVVLA-----------RTRLGLHMRALSND 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +     L   ++    +A+A+S  F G+ G   A                I   +  I+G
Sbjct: 176 RHLSGVLGIRVLSVDAAAWAISGVFAGITGLLLANLVRL--QAAVLTFLVIPAFAAAIVG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
            + SL     A  ++IG+ E        +            +     + 
Sbjct: 234 RLASLP-ATVAAGVVIGLAEALAITVPGFAPYRSATPFLIALVAMLFIG 281


>gi|110680268|ref|YP_683275.1| ribose ABC transporter, permease protein [Roseobacter denitrificans
           OCh 114]
 gi|109456384|gb|ABG32589.1| ribose ABC transporter, permease protein [Roseobacter denitrificans
           OCh 114]
          Length = 320

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/316 (13%), Positives = 93/316 (29%), Gaps = 18/316 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
            + IL    VV  +L+        +   + ++       ++ A G  +V+     + L+ 
Sbjct: 2   RETILAAAIVVLLILIASRFSGFVAPSNLVNVFNDTAPLIILALGQMVVI-LTRCIDLSV 60

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A+   +  ++   +       I   A+  G     +    +        + TL   
Sbjct: 61  AANLALTGMAVAMINVAFPGLPIPFIIAIAICLGGAMGAINGLLVWKLAIPPIVVTLGTM 120

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            IF+ I+                  L   G  V +      F        + +  +    
Sbjct: 121 TIFRGIIF-----------------LISDGKWVNAHEMSEGFTGFPRAAVLGLPILSWCA 163

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                   + + RTA+  +   +  N  A       +   +  AF +S A  G+ G  + 
Sbjct: 164 VLSVIVFAVMMSRTALGRSIFAVGGNPHAAVYTGIDVGKTQFKAFVISGALAGLTGYLWV 223

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           A       D+    E  +V + VI G   +    +   A+L  +            N   
Sbjct: 224 ARYAVAYVDIAGGFELEVVAACVIGGISIAGGIGSVGGAVLGALFLGVVKNALPVVNISP 283

Query: 311 KFDCSFNMRHTTLMVI 326
            +  + +     + V 
Sbjct: 284 FWQLAISGSAILIAVA 299


>gi|320661674|gb|EFX29089.1| Xylose transport system permease protein xylH [Escherichia coli
           O55:H7 str. USDA 5905]
          Length = 393

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIIST-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|317404405|gb|EFV84823.1| hypothetical protein HMPREF0005_02557 [Achromobacter xylosoxidans
           C54]
          Length = 304

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 91/306 (29%), Gaps = 15/306 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +  + + GL++V G + +++L     Y +GA+      +  G     L+  
Sbjct: 8   VLNGLQYSALLFLLSAGLTLVFGIMNVINLTHGSFYMVGAFCAASAAAATGSFFAALLAA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A  +    ++  L              L    +          +               
Sbjct: 68  LAGAALYGLVVELLVIRHLYRRDHLDQVLATLGLTLFTNELVTVLFGRSPPFMDIPPFLA 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +             + Y +     +     ++  + L + RT +    R   D+ +
Sbjct: 128 GSVALLP----------GLNYPVMRLAFIGAGVLVALGLWLLISRTRVGMLVRAGADDGE 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   I       F + +   G AG   A           +      V+ +V    +
Sbjct: 178 MVDALGVNIQRLFTLIFTLGALLCGFAGVMAAPLLAVEIGMGERILITTFVVIVVGG--V 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF---DCSFNMRHTTLMVIALFLVILMR 335
            S+      + ++     L      ++ + LL     D + +   +  + I + +V+L +
Sbjct: 236 GSVRGALAGSLMIGMTDALGRAYIPFWMSRLLPPQLSDSASSSLVSASIYILMAIVLLFK 295

Query: 336 SHSLLR 341
              L+ 
Sbjct: 296 PRGLVP 301


>gi|310814956|ref|YP_003962920.1| ABC transporter, membrane spanning protein (ribose)
           [Ketogulonicigenium vulgare Y25]
 gi|308753691|gb|ADO41620.1| ABC transporter, membrane spanning protein (ribose)
           [Ketogulonicigenium vulgare Y25]
          Length = 323

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 96/316 (30%), Gaps = 25/316 (7%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV-GSLGLLSLNCVI 72
           +  L +V   ++  L        + I S+     I  + A G ++V+ G    + L+   
Sbjct: 19  LAILASVALLIIGELISPGFARGRQIVSLLTVAAILGIVAAGQNLVILGGREGIDLSVGA 78

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
             ++GA       +     I + + ++  +    G++ G+     R   L +        
Sbjct: 79  MISLGAVLAGNAMNGMNSGIGIAMLMALGVPFLVGIVNGIGVTIVRIPPLVMTL------ 132

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
                        G   +     + +                        +  +L     
Sbjct: 133 -------------GMTAVLQGALVVYSQGVPSGRAAPALASFVNQPLAFGIPGILFVWVA 179

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L+  +   LRRTA  +A   +  N++A   +   +   ++  + +S  F G+ G      
Sbjct: 180 LALFMWFLLRRTAFGHAVYAMGANERAATLVGIPVRRVRVLLYGLSGLFAGLTGLCVIGY 239

Query: 253 RDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
                  +        VI++VI      GG+            L  +  +   +N  ++ 
Sbjct: 240 TGSSFISVGDQYVLPSVIAVVIGGTSLAGGIGGYWGTMAGAVALTLLQSVLITLNMDFWA 299

Query: 308 SLLKFDCSFNMRHTTL 323
             + F  +  +     
Sbjct: 300 RQMVFGVTLLLMMLLY 315


>gi|237814366|ref|YP_002898817.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia pseudomallei MSHR346]
 gi|237506292|gb|ACQ98610.1| branched-chain amino acid ABC transporter, permease protein
           [Burkholderia pseudomallei MSHR346]
          Length = 168

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 63/157 (40%), Gaps = 1/157 (0%)

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L +   +   I+ +  +        I++N+    SL       KL AF +S+A  G+AG
Sbjct: 1   MLVVIACACFFIVRIVHSPFGQVLVAIKENEPRAISLGYDTDRFKLLAFILSAALAGLAG 60

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           A         +     ++ + +V+ + ++GGM +L       A+++ + +    +  +  
Sbjct: 61  ALKVVVLGFETLSDAYWTMSGLVVLMTLVGGMGTLFGPLVGAALIVALEDRLGDIGGWLA 120

Query: 307 NSL-LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           +   + +  S     T +  +   + +L     ++  
Sbjct: 121 SVTHIDWFRSLGESATIVTGLIFIVCVLAFRRGIVGE 157


>gi|83593635|ref|YP_427387.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
 gi|83576549|gb|ABC23100.1| inner-membrane translocator [Rhodospirillum rubrum ATCC 11170]
          Length = 325

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 91/299 (30%), Gaps = 13/299 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             + + ++  + +   +L+     A      + S+    +I  + A G+ +V+   G + 
Sbjct: 4   FQRSEVVIGAILLGAMVLIGFINPAFWHLDNLFSLLRSNVIIGIMALGVLLVM-ISGGID 62

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++         Y  +      G    +L  + A + GA    +    +        I TL
Sbjct: 63  VSFPAFAVAAMYLTIKGMILLGYDGVVLPLIVATLMGAAFGAVNAFFVHKIRMIPLIVTL 122

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               + +  L+       G  G  + +        +    +      +       +  ++
Sbjct: 123 GTGSMVRGFLL-------GVVGTSMINIDKMPRALIDFAKQDAISMRNADGTTYGLTAMV 175

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    L+  I   LR T I         +++A               +  + A  G AG 
Sbjct: 176 LVYIGLAILIGWILRHTMIGRGIYAYGGDKEAASRAGFNTGAIVFFVYCTAGALAGFAGL 235

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
                    +P  F   E  ++ ++V     I GG   +        +L+ +      +
Sbjct: 236 LHGGMIWLANPRDFVGLELDVIAAVVLGGASIFGGRGGVVGTMLGVFMLVMIKNSLIIL 294


>gi|300866035|ref|ZP_07110767.1| inner-membrane translocator [Oscillatoria sp. PCC 6506]
 gi|300335950|emb|CBN55925.1| inner-membrane translocator [Oscillatoria sp. PCC 6506]
          Length = 334

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 99/314 (31%), Gaps = 29/314 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + +V  ++  L      S   + ++  Q  I ++ A G++ V+   G + L+     
Sbjct: 34  ILPILIVICIVFSLVTPNFLSLGNLINVIRQASINIVLATGMTFVI-LTGGIDLSVGSIL 92

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A   V++    GL  + +        G   +   L +      YL +   I++    
Sbjct: 93  GVTAVVGVLVSLLPGLGWFAVPAALLAGIGLGLLNGSLIA------YLGLPPFIVTLGSY 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L     +                      + R   F      Y   + ++++      
Sbjct: 147 TALRGVAYLV---------------ANGTTVINRNLNFAWVGNNYLGPIPWLVIIAFLAV 191

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    LRRT +      +  N +A       +    L  + VS    G+ G   A+   
Sbjct: 192 LASWFVLRRTVLGRHIYAVGGNSRAARLTGIKVNRVLLFVYGVSGLLSGLGGIMSASRLY 251

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
             +  M      +  I+ VIL      GG+ ++        I+  +      MN  +F  
Sbjct: 252 SAT-GMLGQGYELDAIAAVILGGTSFTGGIGTIWGTLLGALIIALLNNGLTLMNVSFFWQ 310

Query: 309 LLKFDCSFNMRHTT 322
           L+       +  T 
Sbjct: 311 LVVKGLVIIIAVTI 324


>gi|269128389|ref|YP_003301759.1| inner-membrane translocator [Thermomonospora curvata DSM 43183]
 gi|268313347|gb|ACY99721.1| inner-membrane translocator [Thermomonospora curvata DSM 43183]
          Length = 428

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/315 (10%), Positives = 82/315 (26%), Gaps = 8/315 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L A V   L++   G   +   + +  +     ++      ++    G++++     +
Sbjct: 106 VYLAAFVAAFLVWAAAGHNLNFTSVLNAMVLAATPLILGALCGVLCERSGVINVAIEGQF 165

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GA+   +L S  G     L+           M+    +       +    L +     
Sbjct: 166 LVGAFCASLLASISGSLWVGLVAGCLGGGLLGAMLAVFANRYLVQQVVLGVVLNLFAAGL 225

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +  + +                   + SL           +       ++  +    
Sbjct: 226 TGFLYERLMQTNPDYNKTMAFPAIDIPGLSSLPVVGPVLFGQNVIFYITVALIAIVHIGL 285

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                    T      R + ++  A  ++   ++  +     +     GM GA+     +
Sbjct: 286 F-------HTRWGLRTRAVGEHPTAADTVGIRVVAMRYRNVILGGLIAGMGGAWLTIGLN 338

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                     +  I ++ +I  G  S      A  +      +   +          F  
Sbjct: 339 ITFNKNMAAGQGFIALAALIF-GRWSPLGAVWAALLFGFAGGVSVSLQPLQTPVPTAFLS 397

Query: 315 SFNMRHTTLMVIALF 329
                 T   V  L 
Sbjct: 398 MTPYLATIFAVAGLV 412


>gi|318076581|ref|ZP_07983913.1| sugar uptake ABC transporter permease protein [Streptomyces sp.
           SA3_actF]
          Length = 284

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 83/263 (31%), Gaps = 25/263 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    VV  L+   F     S +   +  +Q+   V+ A G+++ +G+ G + L+     
Sbjct: 25  VYAGVVVLLLVNIAFTPHFLSTENFRTQAVQVAPIVIVALGMALAIGTEG-VDLSVGAVM 83

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      +      +   L+  +  +++G     +                +    +  
Sbjct: 84  ALATSLLSLYLGYGLVVALLMAALGGVLAGLASGALVAFVGVQPIVATLALMVSGRGLAL 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +L + K + N                            +      + + Y+++    L+
Sbjct: 144 VLLPQLKDVRNS------------------------GMNTLGTGSVLGIPYLVIIAAVLA 179

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   +RRT        I D++ A       +    +  + VS     +AG    A   
Sbjct: 180 VVVAFVVRRTTFGRQLLAIGDSRAAAKLAGLPVRRVLVIVYVVSGLLAAVAGILATARLQ 239

Query: 255 RISPDMFKFSENIIVISIVILGG 277
              P        +  I+ V++GG
Sbjct: 240 ASDPTSLGTLMELSAITAVVVGG 262


>gi|261210947|ref|ZP_05925237.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio sp. RC341]
 gi|260839922|gb|EEX66522.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio sp. RC341]
          Length = 335

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/315 (9%), Positives = 88/315 (27%), Gaps = 12/315 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  +  +   ++ +   +  S + + ++  Q  + V+ A G++ ++ + G   L+     
Sbjct: 17  IYAVLFILLAVIVIQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQG-TDLSAGRQV 75

Query: 75  AIGAYSYV--ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            + A      +        ++  +    +++    + +    +      +     +   I
Sbjct: 76  GLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAYLKVTPFI 135

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
                +      N      V            S             +    +Y ++ + F
Sbjct: 136 ATLGTMIIVYGINSLYYDSVGASPIAGFDERFSTFTQGFIRIGDFRFSYITFYAIIAIIF 195

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +         +T        +  N +A       +    L  +A+S  F    G   A  
Sbjct: 196 MWVL----WNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLEAGR 251

Query: 253 RDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
               + ++    E   + + V+      GG+ S++ +     I   +      +    + 
Sbjct: 252 IGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGVSPYW 311

Query: 308 SLLKFDCSFNMRHTT 322
             +            
Sbjct: 312 QYIIKGSIIIFAVAL 326


>gi|258620155|ref|ZP_05715194.1| Ribose transport system permease protein rbsC [Vibrio mimicus
           VM573]
 gi|262174021|ref|ZP_06041698.1| possible fucose ABC transporter permease component [Vibrio mimicus
           MB-451]
 gi|258587513|gb|EEW12223.1| Ribose transport system permease protein rbsC [Vibrio mimicus
           VM573]
 gi|261891379|gb|EEY37366.1| possible fucose ABC transporter permease component [Vibrio mimicus
           MB-451]
          Length = 331

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 79/262 (30%), Gaps = 21/262 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +   L      +   + ++ +Q  +  + A G + V+ + G + L+     A
Sbjct: 32  LISLVLLMIFFSLGTPYFLNVDNLLTVALQTSVIGIIAIGCTYVIITAG-IDLSVGSVMA 90

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                  +  S        ++  +   +    +   L +      ++A   L+MS     
Sbjct: 91  FSGVCVGLAASIGLPLPICIMVGALAGALCGVLNGALITHITIPPFIATLGLMMS----- 145

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                     G   +    R  +        +         + Y +  + V+        
Sbjct: 146 --------IRGLNLVLTDGRALYFTEYPSFKLLAQGKLFGAIPYPVIYFAVIA------F 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L+RT I      +  ++ A       +   K+  +       G+AG    A  + 
Sbjct: 192 IAAYLLKRTVIGRYIYAVGSSEGAAHLSGIKVNRVKMFVYTFCGLMTGIAGVIITARLNS 251

Query: 256 ISPDMFKFSENIIVISIVILGG 277
             P        +  I+ VI+GG
Sbjct: 252 GQPTA-GMGYELEAIAAVIIGG 272


>gi|222035283|emb|CAP78028.1| Xylose transport system permease protein xylH [Escherichia coli
           LF82]
 gi|312948134|gb|ADR28961.1| putative xylose transport, membrane component [Escherichia coli
           O83:H1 str. NRG 857C]
          Length = 393

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGTLGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|148261303|ref|YP_001235430.1| inner-membrane translocator [Acidiphilium cryptum JF-5]
 gi|146402984|gb|ABQ31511.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Acidiphilium cryptum JF-5]
          Length = 355

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/320 (12%), Positives = 100/320 (31%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +      A++  +L F+     +      ++  Q     + A  +S+++   G   
Sbjct: 32  LKRPEAGALGGAILVFVLFFVVAPPFRQVDAFTTVLYQSATIGIPAVAVSLLM-IGGEFD 90

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L   +A    + +  +  ++   ++W  I  + ++S A G + G   ++ R     + TL
Sbjct: 91  LTAGVAVTTSSLAASMFATKVAGNMWAGIVFALLVSLAIGALNGYLLIRTRLHSF-LVTL 149

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               + Q + I    +  G         +    +        FR   + V   I  +++ 
Sbjct: 150 STFLMLQGLNIALTKLVTGNVATGDISHVPGFASAHAIFASTFRIGGADVSIAILYWFLF 209

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +            RT   N    +  + ++  ++   +   K++ F +        G 
Sbjct: 210 ILVATWVLL------RTRFGNWIFAVGGSDESARAVGVPVRRMKIALFMLVGFSAWFLGM 263

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
                 + +       +E + + + V+      GG  S         I     E     +
Sbjct: 264 HMLFEYNEVQSGAGVGNELLYIAAAVVGGCLMTGGYGSAIGSGFGAFIFGMTTEGVIYAD 323

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
           +     +     +       
Sbjct: 324 WDPDWFMFFVGATLLTATVV 343


>gi|111021069|ref|YP_704041.1| ABC sugar transporter, permease component [Rhodococcus jostii RHA1]
 gi|110820599|gb|ABG95883.1| ABC sugar transporter, permease component [Rhodococcus jostii RHA1]
          Length = 351

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 78/243 (32%), Gaps = 18/243 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    +V  ++  +      S + I  + +   I  +   G ++V+     + L+     
Sbjct: 37  ILAALIVLIVVTTMQNSNFLSSQSIRDILLAASIVGVLVVGQTVVM-ITKNIDLSVGSVL 95

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A++   +      +  ++  ++ +  GA   +     ++F G    + TL    IF+
Sbjct: 96  GLSAFAAGSVMKGADGAPIVVGILAGIAVGAICGLANALLVRFGGVPALVVTLGTMYIFR 155

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I   W                   G  + +      F +        +  +++      
Sbjct: 156 GIAYLWAG-----------------GEQITADEMPSNFLTLGTATLFGVPVLVVVAVVAV 198

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               ++LRR         I  N  A       +    L AF  S A  G+AG  FAA   
Sbjct: 199 VLAGVYLRRYRSGRDLYAIGSNGHAAELAGIAVGKRILLAFVFSGAMAGIAGVMFAARFG 258

Query: 255 RIS 257
            + 
Sbjct: 259 TVD 261


>gi|308234699|ref|ZP_07665436.1| inner-membrane translocator [Gardnerella vaginalis ATCC 14018]
 gi|311115125|ref|YP_003986346.1| ABC transporter membrane protein [Gardnerella vaginalis ATCC 14019]
 gi|310946619|gb|ADP39323.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Gardnerella vaginalis ATCC 14019]
          Length = 342

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 106/324 (32%), Gaps = 14/324 (4%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R N  +K L  + ++Y + + +      +   +  +        + A G+ +++   G +
Sbjct: 14  RPNSMEKTLLTIIILYAMTVSVVNKHFFTLGTLADLTRNGATMAILAAGVYVIM-IAGGI 72

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            ++      +  Y+ V+      ++  L+I + A + GA    +    + +      I T
Sbjct: 73  DVSFPAVAIMSGYTSVVFAVNAKINSILVILIIAAVIGAVLGAINALLIHWLELPTFIVT 132

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L  S IF  ++                  +  + +++    R      +    +  +   
Sbjct: 133 LGTSSIFYGLMTTTVG--------TKPVTISKMPSSLLEFGRCNIVSFTVNGQQNGISIF 184

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            L   F+   +   +  T++ ++   I ++++        ++  KL  + +      +  
Sbjct: 185 FLISIFVYIFVWFIMNHTSLGHSIYAIGNSEEFARRAGLPVLGIKLFIYPLMGVLAAIMA 244

Query: 247 AFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
               A+   + P     +E  ++ ++V     I GG  +L       A+   +      +
Sbjct: 245 IISFANLKFVDPTSIMGTELTVIAAVVIGGTRITGGYGTLFGTFLGVALTQLLNNTLVFL 304

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMV 325
                 + L            +  
Sbjct: 305 GLKSSWNNLFIGGVMIAAVVAIYY 328


>gi|269928713|ref|YP_003321034.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
 gi|269788070|gb|ACZ40212.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
          Length = 296

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 99/320 (30%), Gaps = 29/320 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
           + +  ++I S      IY + A G   +     ++++       +GA           + 
Sbjct: 4   SLELPQWIISGITIGGIYALVALGFVTIYSVTRVINIAQGEFVMLGAMLTA--TLHNRMP 61

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           + L I V+ +   A G  +   +L        +  ++++     +L     I  G A   
Sbjct: 62  LALAILVAVIAVTAIGAGVQRVALYPARRASMVTLIMITIGVDIVLRGIALIIWGTAPYS 121

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           V                         +      +V+  +  +     L+ +RT    A R
Sbjct: 122 VRPFTPGPP-----------IIVGPAVITRQALWVIASVIVIVVVTYLFFQRTMAGRALR 170

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
               N  A   +        L A+A S+A   + GA  A      +         +    
Sbjct: 171 ASAANPVAARLVGIRPERMALLAWAGSAALAALGGAVVAP--ITFATYSMGLDLGLKGFV 228

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             + GG+T+ +       +L  +  +  G++              +     +    L +V
Sbjct: 229 AAVAGGLTNPAAAVIGGLLLGVLESVGAGLH--------------SGLQDVIAFAVLLVV 274

Query: 332 ILMRSHSLLRLRTPSNFLER 351
           +++R   +L LR       R
Sbjct: 275 LIVRQVGILGLRGRFGPRPR 294


>gi|226357856|ref|YP_002787596.1| ribose/xylose/arabinose/galactoside ABC transporter, permease
           component [Deinococcus deserti VCD115]
 gi|226320099|gb|ACO48092.1| putative ribose/xylose/arabinose/galactoside ABC transporter,
           permease component [Deinococcus deserti VCD115]
          Length = 321

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 94/305 (30%), Gaps = 23/305 (7%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
                  + + +  + + + I  +   G ++V+  +  + L+      + A+    L   
Sbjct: 22  AINPRFLTPQSMRDLALNVAIIGLVVVGQTLVL-LMKHVDLSVSSTLGLTAFLTGSLFVA 80

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                  L  V+ +  GA    +    + +      +ATL    +F+ +   +  +  G+
Sbjct: 81  NPSMPIGLAFVAGVGIGALLGAVNGLLVAYGKVPALVATLGTLYVFRGV--DYAVVQGGQ 138

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                    +    +   L          V+  +F  Y+               R     
Sbjct: 139 ITASNLPAAFSSFASSSVLGVPSLVLLVLVVMALFSIYL---------------RSYRAG 183

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
             +  +  N +A       +    ++ F +S A  G+AG  + A    +        E  
Sbjct: 184 REYYAVGSNVEAASLAGINVSRRVMTGFILSGAIAGLAGVLYLARYGTVDAAAGTGLELQ 243

Query: 268 IVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           ++ + V+      GG+ +++       +L  +      +    F           +  + 
Sbjct: 244 VIAAAVVGGVAITGGVGTIAGAGIGALLLGVIGSALVALRAPAFWQQAIQGALLLLAISI 303

Query: 323 LMVIA 327
            +V+A
Sbjct: 304 DIVVA 308


>gi|254513037|ref|ZP_05125103.1| ABC sugar transporter, inner membrane subunit [Rhodobacteraceae
           bacterium KLH11]
 gi|221533036|gb|EEE36031.1| ABC sugar transporter, inner membrane subunit [Rhodobacteraceae
           bacterium KLH11]
          Length = 331

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/315 (13%), Positives = 100/315 (31%), Gaps = 25/315 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  +   ++  L        + +     Q+    + A G+++V+   G + L+     A
Sbjct: 28  FLALIALIVINMLITPNFLQLQTLYVNLTQVATIAIVALGMTMVIA-SGGIDLSVGAVMA 86

Query: 76  I-GAYSYVILGSRY-GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
           + GA +  I  S +   +  + + ++ +I    G++ G+ +      +     +    +F
Sbjct: 87  LSGALAPYIFLSDFGVANPTMGLVLAILIGLLAGLVCGMFNGFLINQFAIQPIVATLVLF 146

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
                  + +TNG   ++                    F        + + +  L    L
Sbjct: 147 IAARGLAQVLTNGNLQVFDNPA----------------FEFLGTGRILGLPFQALAAVVL 190

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           + ++   +RRT+       +  N KA      ++   +L  +A+     G AG   +A  
Sbjct: 191 ALALSWVVRRTSYGRYLLAVGGNPKAANLSGISVNRVRLLTYAICGVLAGFAGMVVSAIN 250

Query: 254 DRISPDMFKFSENIIVISIV------ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
                +       +  I+        ++GG   +        I+  V         +   
Sbjct: 251 SASDANQTGQLMELDAIAAAVVGGASLMGGKAPIIGALIGACIIQLVKYTLLANGVHDAV 310

Query: 308 SLLKFDCSFNMRHTT 322
           +L+       +    
Sbjct: 311 ALIAKAVIIILAVYV 325


>gi|270488300|ref|ZP_06205374.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
 gi|270336804|gb|EFA47581.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
          Length = 362

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/355 (13%), Positives = 97/355 (27%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  +A++     F   GA  S + I ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 1   MLAAIAIIMLFFTFTTEGAYLSARNISNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 59

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM---- 129
             +      I     G  + L I V+  +    G   G      +     +    M    
Sbjct: 60  MGLLGGIAAIFDVWLGWPLPLTIVVTLALGLVLGAWNGWWVAYRKVPSFIVTLAGMLAFR 119

Query: 130 -------------------------------------SEIFQNILIKWKPITNGKAGIYV 152
                                                  +   +  +W+   +       
Sbjct: 120 GILIGITNGTTVSPTSNAMSQIGQSYLPSGIGFGIGAIGLMLFVAWQWRRRNHRIRLGLP 179

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                   T               +     +   +L +  L  + +    RTA       
Sbjct: 180 VAAPQGDVTRQTITAVIVLGAIYLLNDYRGVPTPVLILTALMLAGVFMATRTAFGRRIYA 239

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N  A       +   KL+ FA++   + MAG   ++     SP     +E   + + 
Sbjct: 240 IGGNIDAARLSGINVERTKLAVFAINGLMVAMAGLILSSRLGAGSPSAGNIAELDAIAAC 299

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 300 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGAILLLAVWM 354


>gi|242237541|ref|YP_002985722.1| inner-membrane translocator [Dickeya dadantii Ech703]
 gi|242129598|gb|ACS83900.1| inner-membrane translocator [Dickeya dadantii Ech703]
          Length = 390

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/357 (12%), Positives = 99/357 (27%), Gaps = 47/357 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             ++  +  +      +  GA  S + I ++  Q  I  + A G+  V+ S   + L+  
Sbjct: 27  YVMIAAVVAIGLFFTLMTDGAYLSARNISNLLRQTAITGILAVGMVFVIISA-EIDLSVG 85

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM-- 129
               +   +  I    +G  + L I V+ ++    G   G      R     +    M  
Sbjct: 86  SMMGLLGGAAAIFDVWFGWPLPLTIVVTLLLGLLLGAWNGWWVAYRRVPSFIVTLAGMLA 145

Query: 130 ------------------------------SEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                                           +     +    +           R    
Sbjct: 146 FRGVLIGVTSGTTVSPTSPAMSRIGQSYLPDGVGFLFGVLGLLLFVAWQWRQRRSRQRLG 205

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYV---------LLGMCFLSASIILWLRRTAISNAW 210
                S     R      +    +Y +         +L +  +  + +    RTA     
Sbjct: 206 LPVAPSSADVGRQALMAAVVLGAIYLLNDYRGVPTPVLLLTLIMLAGVFMAARTAFGRRI 265

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N  A       +   KL+ FA++   + +AG   ++     SP     +E   + 
Sbjct: 266 YAVGGNLDAARLSGINVERTKLAVFAINGLLVAVAGLVLSSRLGAGSPSAGNIAELDAIA 325

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 326 ACVIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGGILLLAVWM 382


>gi|269838172|ref|YP_003320400.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
 gi|269787435|gb|ACZ39578.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
          Length = 359

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 48/358 (13%), Positives = 93/358 (25%), Gaps = 34/358 (9%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
             RL +       + +   + LF+   A        +  +   +  + A GL+++ G L 
Sbjct: 14  PTRLGRLGDAAGSVVLFGAIGLFVIWSALTHPSQFVAGLVVGSVLALGALGLTLIYGVLK 73

Query: 65  LLSLNCVIAYAIGAYSYVILGS---------------RYGLSIWLLIPVSAMISGACGMI 109
                   +  + AY      S                +         +     G   ++
Sbjct: 74  FAHFAHGDSMMLAAYLAFFALSGNLVGTRGTDVRLPWSFADLPGATERIWRFSFGYGLLL 133

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
             + +       L +    +    +              G+ +A R   L     +   +
Sbjct: 134 SIVVAAALSAVILILVDRWVYRPLRQRRAGLAIFAIVSLGVAIAMRSLVLMIWGPTPRFY 193

Query: 170 FR------FPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                                +++     L+A +   L RT    A R + DN       
Sbjct: 194 VSGIRPTLQIPGGPRIPTDQLFIVAAAIVLAAVVYFLLYRTTTGRAMRAMADNPDLARVS 253

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSK 283
                    + + VS   I +AG   A            F   + V +  ILGG+ S   
Sbjct: 254 GIDTEAVVRTTWLVSGGLIAVAGVLLALQSQL--KPELGFILLLPVFAAAILGGIGSPHG 311

Query: 284 IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                        +   +        +           ++  + L LVIL R   L  
Sbjct: 312 A-----------LVGGLVVGVVQEVAVAVGPLSPGYKFSIAFVILILVILARPRGLFG 358


>gi|159899524|ref|YP_001545771.1| inner-membrane translocator [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892563|gb|ABX05643.1| inner-membrane translocator [Herpetosiphon aurantiacus ATCC 23779]
          Length = 337

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/329 (13%), Positives = 93/329 (28%), Gaps = 44/329 (13%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY------------GL 90
             +     + A G ++V G L L++      + IGA+  +I  S +              
Sbjct: 16  LTKGTYIAVIALGYTLVYGILELINFAHGDLFMIGAFLSLIFISLFGLDPKTSSGLTIFF 75

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           S+  ++ +  + +      +   + +   +   +A LI +     +L             
Sbjct: 76  SLIAILGLVMLCTAFLNAGIERFAYRPLRNAPRLAPLISAIGMSFVLQNVGIFLGDGLIW 135

Query: 151 ------------------YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
                               +  +               F    + Y      V++    
Sbjct: 136 GKAADALGSDALERVSTAMGSQSVAPKNIPDLLPNGQVFFIPDSLKYTYKDLLVVVVSLG 195

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L A +  ++R T +  A R    ++ A   +           F +  A  G AG      
Sbjct: 196 LLAGLYSFVRFTKLGKAIRATAQDRDAARLMGINADRTISVTFLIGGALGGAAGMIVGLY 255

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
                  M  F+  ++  +  +LGG+ +             ++    G         L  
Sbjct: 256 NGTALFTM-GFTAGLLSFTAAVLGGIGN-------------ILGSALGGLLIGLILALSD 301

Query: 313 DCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                     ++   L L++L R   LL 
Sbjct: 302 QYIGARWSNAVIFAILVLILLFRPTGLLG 330


>gi|87121003|ref|ZP_01076895.1| Ribose/xylose/arabinose/galactoside ABC-type transport
           systems,permease component [Marinomonas sp. MED121]
 gi|86163841|gb|EAQ65114.1| Ribose/xylose/arabinose/galactoside ABC-type transport
           systems,permease component [Marinomonas sp. MED121]
          Length = 344

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/314 (12%), Positives = 87/314 (27%), Gaps = 17/314 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              +L  L +   ++  L      + + + ++  Q    ++ A G    +   G   L+ 
Sbjct: 27  RLGVLPFLLLAAIIIFSLLSENFLTGRNVMNVFRQSSYLMLIAMGQMFAL-LTGGFDLSV 85

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               AI +    I+ S         I +S  +    G+ +G               LI  
Sbjct: 86  GTIVAITSVVSAIVMSTLFSLYPDAIWLSISVGALVGLFVG-----------TSIGLING 134

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                  +    +T G + +     LY  G +    +      +      + +   +   
Sbjct: 135 IGVAIFKVNPFMMTLGMSSVGFGAALYLTGGSPVYGMPMDFSDTFGFGKLLGIPAPIWIC 194

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
               A++ L +  T     +  +  N KA            + A+ +S     + G    
Sbjct: 195 FLCFAALALLVNWTRTGRYFYAVGGNLKAAQLSGINTKKMLMLAYMISGLVAAVCGILLT 254

Query: 251 ASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A  D    ++        + + VI      GG+  +  +      +  +           
Sbjct: 255 ARLDTGEANIGASFPLESIAACVIAGVSLRGGVGRIGNVVLGALFIGLITNGMNLARIES 314

Query: 306 FNSLLKFDCSFNMR 319
           +   +         
Sbjct: 315 YLQTVVIGLLLIFA 328


>gi|319785054|ref|YP_004144530.1| sugar ABC transporter ATPase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170942|gb|ADV14480.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 332

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 84/313 (26%), Gaps = 18/313 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L      ++ +L      S   + ++  +     + A G + V+ S G L L+     A
Sbjct: 26  FLALAALLVVGYLINPDFLSATNLANVITRSAFIAIIAVGATFVI-SSGGLDLSVGSMAA 84

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                 ++  +       +    + M       ++   +         I   I +     
Sbjct: 85  FITGITIMFMNAVAPHAGIWAIPAGMAVAILVGLVCGLANGLIVTVGRIEPFIATLGTMG 144

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I                   L   GT          +   +      +   +L    ++A
Sbjct: 145 IFRAL------------ITYLTDGGTIPIDRSLREAYRPVYFGTVGGIPVPILISIAVAA 192

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L +         +  N+        ++I  +  A+ V    + +A   +      
Sbjct: 193 VASFILYKMKYGRKCAAVGANEDVARYSGISVIRTRTVAYIVQGVCVAIAAICYVPRLGA 252

Query: 256 ISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            +P   +  E  ++ ++VI      GG   +        IL  +  L    +F     + 
Sbjct: 253 ATPTTGQLWELQVITAVVIGGTALRGGKGHVWGTVAGAVILELIANLMVLSDFVSEYLVA 312

Query: 311 KFDCSFNMRHTTL 323
                  +    +
Sbjct: 313 AVQGVIIIIAMLI 325


>gi|296141232|ref|YP_003648475.1| inner-membrane translocator [Tsukamurella paurometabola DSM 20162]
 gi|296029366|gb|ADG80136.1| inner-membrane translocator [Tsukamurella paurometabola DSM 20162]
          Length = 329

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 85/312 (27%), Gaps = 26/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               +V  ++ F+      +   I  +  Q ++  + A   S+++ + G + L+      
Sbjct: 30  LAALIVACVVFFILTPRFATGYNISLILQQSMVIGILAVAQSLIILTAG-IDLSIGATCV 88

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +G      +         L + ++       G + G      +     +   +       
Sbjct: 89  LGTVILAKVAG---TDPVLAMVIALGACVVIGAVNGALVTLLKLPPFIVTLGMF-----T 140

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           I+     +  G     VAD                   +SF ++   +   L+ +  +  
Sbjct: 141 IVAAATQLYAGSQTYRVADGP------------LTALGTSFDVFGFPLTLGLVVLLLVYG 188

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +    L RTA       +  N  +               + VS     +A          
Sbjct: 189 AAWYILTRTATGRHIYAVGGNPVSASLAGIKTTKTVFGVYLVSGVIAAIAAWAALGRIPT 248

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P+ F+ +    + ++VI      GG  ++        I+  +      +        +
Sbjct: 249 ADPNAFQTANLDTITAVVIGGTSLFGGRGAILGTLVGALIVGVLRNGLTLVGIDNLYQNI 308

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 309 ATGVLVIAAVAL 320


>gi|261218543|ref|ZP_05932824.1| monosaccharide-transporting ATPase [Brucella ceti M13/05/1]
 gi|261320608|ref|ZP_05959805.1| monosaccharide-transporting ATPase [Brucella ceti M644/93/1]
 gi|260923632|gb|EEX90200.1| monosaccharide-transporting ATPase [Brucella ceti M13/05/1]
 gi|261293298|gb|EEX96794.1| monosaccharide-transporting ATPase [Brucella ceti M644/93/1]
          Length = 337

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 90/301 (29%), Gaps = 21/301 (6%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      S   + ++  +     + A G + V+ S G L L+     +I           
Sbjct: 46  IANPNFISIDNLLNVATRSAFIAIIALGATYVI-SSGGLDLSVAFVASIMILFMNSGMIA 104

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             + + +   + A++ GA   ++        G    IATL    I++ +           
Sbjct: 105 DPVLMLIAAVMLALVVGAACGLLNGIITTVGGIEPFIATLGTMGIYRGLTTWLSQ----- 159

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                         T+R+      +  ++    + +   ++ +   +A     L RT   
Sbjct: 160 ----------GGAITLRNPEIQSLYRPAYFGSVLGVPVPVIVIFVTAALAAFVLYRTRYG 209

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N+        ++   +  AF +    + +A   +       S       E  
Sbjct: 210 RHIIAVGSNEDVARYSGISVKKVRTIAFVIQGLCVAVAVLLYVPRLGSTSATTGLMWELQ 269

Query: 268 IVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V+      GG+  +        IL  +  +    +F     L     +  +    
Sbjct: 270 AITAVVVGGTALRGGVGRIWGTICGAFILEIIGNIMLLSSFVSEYLLGAIQGAIIIIAML 329

Query: 323 L 323
           +
Sbjct: 330 V 330


>gi|258624017|ref|ZP_05718970.1| Ribose transport system permease protein rbsC [Vibrio mimicus
           VM603]
 gi|258583811|gb|EEW08607.1| Ribose transport system permease protein rbsC [Vibrio mimicus
           VM603]
          Length = 331

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 79/262 (30%), Gaps = 21/262 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V+  +   L      +   + ++ +Q  +  + A G + V+ + G + L+     A
Sbjct: 32  LISLVLLMIFFSLGTPYFLNVDNLLTVALQTSVIGIIAIGCTYVIITAG-IDLSVGSVMA 90

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                  +  S        ++  +   +    +   L +      ++A   L+MS     
Sbjct: 91  FSGVCVGLAASIGLPLPICIMLGALAGALCGVLNGALITHITIPPFIATLGLMMS----- 145

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                     G   +    R  +        +         + Y +  + V+        
Sbjct: 146 --------IRGLNLVLTDGRALYFTEYPSFKLLAQGKLFGAIPYPVIYFTVIA------F 191

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L+RT I      +  ++ A       +   K+  +       G+AG    A  + 
Sbjct: 192 IAAYLLKRTVIGRYIYAVGSSEGAAHLSGIKVNRVKMFVYTFCGLMTGIAGVIITARLNS 251

Query: 256 ISPDMFKFSENIIVISIVILGG 277
             P        +  I+ VI+GG
Sbjct: 252 GQPTA-GMGYELEAIAAVIIGG 272


>gi|238059506|ref|ZP_04604215.1| ribose transport system permease rbsC [Micromonospora sp. ATCC
           39149]
 gi|237881317|gb|EEP70145.1| ribose transport system permease rbsC [Micromonospora sp. ATCC
           39149]
          Length = 356

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 84/270 (31%), Gaps = 22/270 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +  +       ++ A G+S+V+   G + L+     A+      +  S       L   +
Sbjct: 51  LIDIVRLSAPLILVALGMSLVIA-TGGIDLSVGSVAAVSGAIACLYISEQPDQNSLGAVL 109

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+       ++           + I  +I + I          +      I +      
Sbjct: 110 TALAIAFGIALLLGAWNGILVAGIGIQPIIATLILMVAGRGLAQLITSGQIITINSEP-- 167

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                        + +  V + + + + ++    ++  + +  RRTA+      +  N +
Sbjct: 168 -------------YKTIGVGHLLTLPFAIIIALAVTLLVAVLTRRTALGMIIEAVGGNAE 214

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A            L  + VS+A   +AG    A+      +       +  I  V++GG 
Sbjct: 215 ASRLAGIRSRRITLLVYVVSAACAAIAGFMMTANVSSADGNAVGLWVELDAILAVVIGGT 274

Query: 279 T------SLSKIAKATAILIGVVELCCGMN 302
           +       LS       I+  +      MN
Sbjct: 275 SLAGGRFYLSGTIVGALIIQTLTTSVYAMN 304


>gi|218691856|ref|YP_002400068.1| D-xylose ABC transporter membrane protein [Escherichia coli ED1a]
 gi|331659884|ref|ZP_08360822.1| xylose transport system permease protein XylH [Escherichia coli
           TA206]
 gi|218429420|emb|CAR10385.2| D-xylose transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli ED1a]
 gi|320193919|gb|EFW68552.1| Xylose ABC transporter, permease protein XylH [Escherichia coli
           WV_060327]
 gi|331053099|gb|EGI25132.1| xylose transport system permease protein XylH [Escherichia coli
           TA206]
          Length = 393

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|167576693|ref|ZP_02369567.1| ABC transporter permease protein [Burkholderia thailandensis TXDOH]
          Length = 343

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 92/311 (29%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 44  VLVLLCVGFAFMTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 102

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S      WL IP +  +    G++ G      R     +    ++ +     
Sbjct: 103 A-VASLLASNIPGWGWLGIPAALAVGLVFGVVNGGLISLLRLPPFIVTLGALTAVRGIAR 161

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    +G           F        + + ++++    + A  
Sbjct: 162 L--------------------MGNDTTIFNPQLPFAFIGNGSILGVPWLVVIALAVVAIS 201

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   +L  +A S    G+     AA     +
Sbjct: 202 WFILRRTVLGMRIYSVGGNPEAARLSGINVRGIELFVYATSGLLAGLGALMSAARLYAAN 261

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 262 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLSNGLVLLGVSDIWQYII 321

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 322 KGLVIIGAVAL 332


>gi|121607351|ref|YP_995158.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121551991|gb|ABM56140.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 290

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 86/288 (29%), Gaps = 16/288 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +  +   +    + + GL+++ G + +++L       +G Y+ ++           ++ V
Sbjct: 10  VFDLAYTVATLALVSAGLALIFGLMRVINLAHGEFIVLGGYTTIVALRMGCNIWLAMLIV 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ G  G ++    ++          L    +   +      I               
Sbjct: 70  APIVVGCFGFLVERLVIRHLYGRTVDTMLATWGLSLALSGALSMIFGTTTTGVPNP---- 125

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                                  +  +++     L AS+   LR   +    R    + +
Sbjct: 126 ----------VGSLSIGQYQVGGYSLFIIAVSTLLLASLYFVLRSMRVGMIVRGAMQSAE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L  +     ++ F   S   G+AG   +                      VI GG 
Sbjct: 176 IAAALGHSPQRIYMATFVAGSMVSGLAGGVLSPLVGL--TPSAGGQFIAKAFITVIAGGA 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           + ++    A+A+L  V ++   ++      +    C+  +       I
Sbjct: 234 SVVAGTVSASALLGTVAKVFELLSSPVVGEMALLICAVILLRVLPQGI 281


>gi|237786119|ref|YP_002906824.1| ABC transporter permease [Corynebacterium kroppenstedtii DSM 44385]
 gi|237759031|gb|ACR18281.1| ABC-type transport system, permease protein [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 354

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/301 (16%), Positives = 98/301 (32%), Gaps = 13/301 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +    L AV+   L      + +S     ++        + +  + +++   G   
Sbjct: 32  LMRPEAASILGAVIVFALFMAVAPSFRSFAAFSTVLYASSTIGIMSLAVGLLM-IGGEFD 90

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A   GA +  ++   + L+ W  + +S +I+ A G   G+  +K   D   I   
Sbjct: 91  LSSGVAVTTGALAATMMNYNWHLNSWTGVVLSLLIAVAIGTFNGVLVMKTGLDSFLITLA 150

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               +    L   K +TN  +   ++D   F             F SS  I  + +   +
Sbjct: 151 SFLMLQGLNLAITKWVTNAVSTPSISDMQGFGSAK-------DVFASSITIGSVSVKITV 203

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L      A     L  T   N    +  +  +  +    +   K+  F   S      G 
Sbjct: 204 LWWLVFVAIATYVLYSTRFGNWIFAVGGDHNSARAQGIPVTRVKVLLFIGVSVAAWFVGM 263

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILG-----GMTSLSKIAKATAILIGVVELCCGMN 302
               + D +       +E + +I  VI G     G  +    A    I   + +      
Sbjct: 264 HTLFAFDSVQAGQGVGNEFLYIIGAVIGGVSMKGGKGTAIGTAIGAFIFGMINQGIVYAG 323

Query: 303 F 303
           +
Sbjct: 324 W 324


>gi|167834893|ref|ZP_02461776.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia thailandensis MSMB43]
          Length = 292

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/287 (12%), Positives = 81/287 (28%), Gaps = 14/287 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S      +Y +   GL ++  + G+L+       A+GAY                 
Sbjct: 8   PYLISGLGVGAVYALSGVGLVVLYRASGVLNFAFGATGALGAYVAAACLDADYPQALAWG 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A  + A  +     + +       +   + +  F  +L+ +     G     +    
Sbjct: 68  AAIAASTAASLVYGLAIAPRLAAR-DRVVRSVATLGFALVLLGFCEWHWGDTPRRLVLPT 126

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                    +   +       +    M  + L +            RT +    R + ++
Sbjct: 127 DSEALDFGDVRFTYTRIVGLALAFAMMAAIGLVLA-----------RTRLGLQMRALSND 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++    L   ++    +A+A+S  F G+ G   A                I   +  I+G
Sbjct: 176 RRLSGLLGIRVLSVDAAAWAISGVFAGITGLLLANLVRL--QAAVLTFLVIPAFAAAIVG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            + SL     A   +     L   +  +             +    +
Sbjct: 234 RLASLPATVAAGVAIGLAEALAITVPGFAPYRSATPFLIALVAMLFI 280


>gi|221068525|ref|ZP_03544630.1| inner-membrane translocator [Comamonas testosteroni KF-1]
 gi|220713548|gb|EED68916.1| inner-membrane translocator [Comamonas testosteroni KF-1]
          Length = 291

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 82/304 (26%), Gaps = 22/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   +Y + A GL++  G   +++L+        A+      S +G+S  LL+ +
Sbjct: 7   LLAGAMLGGLYGLVAMGLTLQYGVARIMNLSYGEFLIAPAFLAFFAVSSWGISPLLLVLL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +  A   ++    L            +  +           +            + F
Sbjct: 67  VVPLGFAIQWLIYQLLLTPLVRRARGGPALEVDSILATFGMLFVVQG-------VMLVMF 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                         VL     L   + L L RT      R +    +
Sbjct: 120 GGDYHSYSYLSEPVEILGSKVAANRLLVLGFAIVLGGGLYLLLTRTRAGAVVRAVSVAPQ 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +      A+ +  A + + G   +                +  + +VI+GG+
Sbjct: 180 FAHLVGINVRSTAALAYGLGGALVAICGVLVSMFLPF--SAGMGTMFAMKALIVVIMGGV 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +L     A  +L     L            +                   LV+L +   
Sbjct: 238 GNLMGCLVAGMLLGFAETLVASFVDPGLTLAVN-------------YAVFLLVLLFKPTG 284

Query: 339 LLRL 342
           L   
Sbjct: 285 LFGR 288


>gi|152967996|ref|YP_001363780.1| inner-membrane translocator [Kineococcus radiotolerans SRS30216]
 gi|151362513|gb|ABS05516.1| inner-membrane translocator [Kineococcus radiotolerans SRS30216]
          Length = 353

 Score = 51.8 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/316 (15%), Positives = 98/316 (31%), Gaps = 13/316 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            + AV   +L  +     ++   + ++        + A  +++++   G   L+  +   
Sbjct: 39  LIGAVAVFVLFCVVAPTFRTAPSLATVAYSASTIGIMAVAVALLM-IGGEFDLSAGVVVT 97

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             A +      + GL++W+ +  + +++   G   G   ++       I       +   
Sbjct: 98  TTALAASTFAYQLGLNLWVGVLAALVLALGIGAFNGWLLMRTGLPSFLITLGTFFMLQGL 157

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L   K +T G +   VAD   F             F S+  +  I +   +L      A
Sbjct: 158 NLGVTKLLTGGVSSDSVADMDGFASAQA-------VFASTIDVGGIGIKITVLWWILFVA 210

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L RT + N    +  + KA  ++   +   K+  F          G     S D 
Sbjct: 211 IATWTLLRTRVGNWIFAVGGDDKAARAVGVPVRRTKIGLFMTVGFAGWFVGMHQLFSFDS 270

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           I        E I +I+ V+      GG  S    A    I            +      L
Sbjct: 271 IQSGGGVGQEFIYIIAAVVGGCLLTGGYGSAVGSAIGALIFGMTSLGIVYAGWDANWFKL 330

Query: 311 KFDCSFNMRHTTLMVI 326
                  +     +V+
Sbjct: 331 FLGVMLLLATIVNLVV 346


>gi|306830375|ref|ZP_07463545.1| ABC superfamily ATP binding cassette transporter substrate
           binding/membrane-spanning protein [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|304427400|gb|EFM30502.1| ABC superfamily ATP binding cassette transporter substrate
           binding/membrane-spanning protein [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
          Length = 689

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 99/305 (32%), Gaps = 33/305 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S   Q L++ + A G+ I    L +  L+   ++ +GA S  I+     ++  +    
Sbjct: 393 VLSAISQGLLWSIMAIGVFITFRILDIADLSAEGSFPLGAASTAIMIVNG-INPLIATIG 451

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +     G + G    K +   L    + ++ ++   L+         AG      L  
Sbjct: 452 GFLAGMIAGAVSGFMHTKMKIPALLTGIITLTALYSINLLVLGSANVSLAGQETLVTLMT 511

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +                   +  + +    L   +++ L  T +  A R   DN  
Sbjct: 512 SALNLSK--------------LYAVILIGVIFVALVIILLVVLLNTQVGLALRATGDNIA 557

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +   K+  + +S+  I +AG+  A +      +M   +         I+ G+
Sbjct: 558 MGEANGIKVDRMKILGYMISNGLIALAGSLLAQNNGYADMNMGTGT---------IVNGL 608

Query: 279 TSLSKIAKATAILIGVV------ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            S+     A  I+  +        +  G   Y    ++    + + +   L    L  +I
Sbjct: 609 ASI---ILAEVIVKYLPLGKRLWSIVLGSILYRLVLVIILAMNVDAQMLKLASAILLALI 665

Query: 333 LMRSH 337
           L    
Sbjct: 666 LYVPE 670


>gi|291285505|ref|YP_003502323.1| putative permease of ribose ABC transport system [Escherichia coli
           O55:H7 str. CB9615]
 gi|290765378|gb|ADD59339.1| Putative permease of ribose ABC transport system [Escherichia coli
           O55:H7 str. CB9615]
 gi|320638848|gb|EFX08494.1| putative permease of ribose ABC transport system [Escherichia coli
           O157:H7 str. G5101]
 gi|320644216|gb|EFX13281.1| putative permease of ribose ABC transport system [Escherichia coli
           O157:H- str. 493-89]
 gi|320649535|gb|EFX18059.1| putative permease of ribose ABC transport system [Escherichia coli
           O157:H- str. H 2687]
 gi|320654931|gb|EFX22892.1| putative permease of ribose ABC transport system [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320660438|gb|EFX27899.1| putative permease of ribose ABC transport system [Escherichia coli
           O55:H7 str. USDA 5905]
          Length = 324

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/313 (9%), Positives = 93/313 (29%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +         ++  + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 23  ILPILILIVAVFGFITPNFFTESNLLNITRQASINIVLAAGMTFII-LTGGIDLSVGSIL 81

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A + +++      ++  +     +          L +      ++       +    
Sbjct: 82  GTTAVAAMVVSLSPEFAMLSIPAALMLGLLLGLFNGALVAFAGLPPFIVTLGTYTALRGA 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+                           +     F      Y   + ++++    + 
Sbjct: 142 AYLL---------------------ADGTTVINSNINFEWIGNNYLGPVPWLVVIALAVI 180

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 181 VVCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGIMSASRLY 240

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 241 SANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 300

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 301 VIKGAVIIIAVLI 313


>gi|22125054|ref|NP_668477.1| sugar transport system permease [Yersinia pestis KIM 10]
 gi|45440962|ref|NP_992501.1| sugar transport system permease [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51595423|ref|YP_069614.1| ABC type sugar transport system permease protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808511|ref|YP_652427.1| sugar transport system permease [Yersinia pestis Antiqua]
 gi|108811231|ref|YP_646998.1| sugar transport system permease protein [Yersinia pestis Nepal516]
 gi|145599934|ref|YP_001164010.1| sugar transport system permease protein [Yersinia pestis Pestoides
           F]
 gi|149365516|ref|ZP_01887551.1| sugar transport system permease protein [Yersinia pestis CA88-4125]
 gi|153948364|ref|YP_001401933.1| ribose ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|162420614|ref|YP_001606359.1| sugar transport system permease [Yersinia pestis Angola]
 gi|165925299|ref|ZP_02221131.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165937636|ref|ZP_02226198.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008247|ref|ZP_02229145.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212260|ref|ZP_02238295.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167398866|ref|ZP_02304390.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167422570|ref|ZP_02314323.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167423635|ref|ZP_02315388.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467250|ref|ZP_02331954.1| ribose ABC transporter, permease protein [Yersinia pestis FV-1]
 gi|170025264|ref|YP_001721769.1| monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|186894453|ref|YP_001871565.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
 gi|218929664|ref|YP_002347539.1| sugar transport system permease [Yersinia pestis CO92]
 gi|229838128|ref|ZP_04458287.1| sugar transport system permease protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229895919|ref|ZP_04511089.1| sugar transport system permease protein [Yersinia pestis Pestoides
           A]
 gi|229898764|ref|ZP_04513909.1| sugar transport system permease protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229901465|ref|ZP_04516587.1| sugar transport system permease protein [Yersinia pestis Nepal516]
 gi|270489652|ref|ZP_06206726.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
 gi|294504392|ref|YP_003568454.1| sugar transport system permease protein [Yersinia pestis Z176003]
 gi|21957906|gb|AAM84728.1|AE013719_3 D-ribose high-affinity transport system [Yersinia pestis KIM 10]
 gi|45435821|gb|AAS61378.1| sugar transport system permease protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51588705|emb|CAH20316.1| ABC type sugar transport system permease protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108774879|gb|ABG17398.1| sugar transport system permease protein [Yersinia pestis Nepal516]
 gi|108780424|gb|ABG14482.1| sugar transport system permease protein [Yersinia pestis Antiqua]
 gi|115348275|emb|CAL21206.1| sugar transport system permease protein [Yersinia pestis CO92]
 gi|145211630|gb|ABP41037.1| sugar transport system permease protein [Yersinia pestis Pestoides
           F]
 gi|149291929|gb|EDM42003.1| sugar transport system permease protein [Yersinia pestis CA88-4125]
 gi|152959859|gb|ABS47320.1| ribose ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|162353429|gb|ABX87377.1| ribose ABC transporter, permease protein [Yersinia pestis Angola]
 gi|165914386|gb|EDR33001.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922906|gb|EDR40057.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992629|gb|EDR44930.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166206191|gb|EDR50671.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166958584|gb|EDR55605.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167051370|gb|EDR62778.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167057805|gb|EDR67551.1| ribose ABC transporter, permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169751798|gb|ACA69316.1| Monosaccharide-transporting ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|186697479|gb|ACC88108.1| inner-membrane translocator [Yersinia pseudotuberculosis PB1/+]
 gi|229681394|gb|EEO77488.1| sugar transport system permease protein [Yersinia pestis Nepal516]
 gi|229688312|gb|EEO80383.1| sugar transport system permease protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229694494|gb|EEO84541.1| sugar transport system permease protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229700842|gb|EEO88871.1| sugar transport system permease protein [Yersinia pestis Pestoides
           A]
 gi|262362619|gb|ACY59340.1| sugar transport system permease protein [Yersinia pestis D106004]
 gi|270338156|gb|EFA48933.1| amino acid or sugar ABC transport system, permease protein
           [Yersinia pestis KIM D27]
 gi|294354851|gb|ADE65192.1| sugar transport system permease protein [Yersinia pestis Z176003]
 gi|320016214|gb|ADV99785.1| sugar transport system permease protein [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 342

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 96/320 (30%), Gaps = 17/320 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +   +  +   L      S++ I ++  ++ IY + A G++ V+ + G + L+     
Sbjct: 29  VLIFMFLLLIFFQLQNSNFLSERNIFNILTEVSIYGIMAVGMTFVILTAG-IDLSVGSIL 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +   +      +           +   GM   +           I  L    + +
Sbjct: 88  AVSAMTAAYVIKGDNFTTIDP-------NAWGGMSWLIGLSICLAMGTLIGFLQGLGVTR 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L  +     G         +   G  +      +R+     +  I +   +  +  ++
Sbjct: 141 LRLPPFIVTLGGMTIWRGLTLVINDGAPIAGFDAGYRWWGRGDLLGISIPIWIFAIVAIA 200

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + L   +T        I  N +A       +    +S + V     G+AG   +A   
Sbjct: 201 GYLAL--HKTRWGRFVYAIGGNPEAARLAGVNVKRVLVSVYVVIGCLAGLAGFILSARLG 258

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                    S  + VI+ V++GG +                 +   +      + L    
Sbjct: 259 SAEAVA-GISFELRVIASVVIGGTS------LMGGYGRIGGTIIGSIIMGILINGLVLMN 311

Query: 315 SFNMRHTTLMVIALFLVILM 334
                   +  + + L +  
Sbjct: 312 VSAYYQQIITGLIIVLAVAF 331


>gi|121604741|ref|YP_982070.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120593710|gb|ABM37149.1| amino acid/amide ABC transporter membrane protein 2, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 434

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 106/295 (35%), Gaps = 17/295 (5%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS-----RYGLSIWLLIPVS 99
           Q    V+     +I++G  G+LS    +   +G++  +   +     R+ + + L+  V 
Sbjct: 44  QAGYLVIICLSYNILLGQGGMLSFGHAVYSGLGSFLAIHAMNLAASGRFYIPLSLIPLVG 103

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            +       ++G  S K  G   A+ TL M E+   + + +     G+AGI         
Sbjct: 104 GLSGLFFAALLGYVSTKKAGTTFAMITLGMGELVFAMSLMFPEFFGGEAGIT-------- 155

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                +              +I +YY++   CF   + +    RT +      +RDN + 
Sbjct: 156 ----TNRAYGKPLWGITFGPQIQVYYLIAVYCFFCTAAMFAFTRTPLGRMLNAVRDNPER 211

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              +       +  AF ++  F G+ G   A + + ++ ++     +  ++    LGG T
Sbjct: 212 VEFIGYNPRCVRYHAFIIAGFFAGIGGGLAAINSEIVTAEVVGSVRSGSLLLFTFLGGAT 271

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
                     +++  +     ++  +   +        M     +   + + + +
Sbjct: 272 FFFGPILGAVLMVLALVWLSELSMAWLLYVGLMFLFMVMHAPGGIASLIVMNLRV 326


>gi|307298310|ref|ZP_07578114.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916396|gb|EFN46779.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 316

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 90/310 (29%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +   V  L++ L      S + I ++  Q  I  + A G + V+   G   ++     
Sbjct: 19  IIIAFFVLALVISLMTPNFLSWRNIINIFRQSSIIGIMAIGSTFVI-IGGGFDISVGSLL 77

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +         W L  +  ++ GA                  IATL    I +
Sbjct: 78  ALSA---AMAVGLQSSMHWFLAVIVVLLVGAAFGAANGFLSSKIHIPPIIATLGTMTIIR 134

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+                   Y         +    F      Y   + + ++ +  L 
Sbjct: 135 GIV-------------------YMYTGGYPLYVDSEGFAFIGNGYIGPIPFPIILLLILV 175

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     L +T        I  N++A       + F     F        M+G  +A+   
Sbjct: 176 ALGQFILVKTKFGRYSCAIGGNKEAARLSGIKVDFYMTLTFVAGGVMAAMSGVVYASRLL 235

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            ++P   +  E   + S V     + GG  S+ +      +L  +      +    +   
Sbjct: 236 SVTPLAGQGYELDAIASAVIGGTSVSGGEGSVVRTLIGALLLTMITNAFNLIGIDLYVQY 295

Query: 310 LKFDCSFNMR 319
           +         
Sbjct: 296 VFKGLVILAA 305


>gi|329934740|ref|ZP_08284781.1| putative sugar transport permease [Streptomyces griseoaurantiacus
           M045]
 gi|329305562|gb|EGG49418.1| putative sugar transport permease [Streptomyces griseoaurantiacus
           M045]
          Length = 414

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/350 (12%), Positives = 97/350 (27%), Gaps = 55/350 (15%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +   +L  L ++  L      G     + + ++ +Q    ++ A G+ +V+   G +
Sbjct: 36  RNMRQYGMLIALGLIVVLFEVWTDGDLLLPRNVSNLVLQNSYILILAIGMMLVI-IAGHI 94

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI-- 124
            L+     A    +  +L  R+ +   L + +  ++  A G + G            +  
Sbjct: 95  DLSVGSLTAFVGAAAAVLMVRHDVPWPLAVVLCLLLGAAAGSLQGFFIAYLGIPSFIVTL 154

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           A +++      I++K + +     G+  A   +       +           V+    +Y
Sbjct: 155 AGMLLFRGLTEIVLKGQTLGPFPEGLQKASNGFLPEVGPDTNYHNLTVLLGLVVIAFVVY 214

Query: 185 -----------------------------------------------YVLLGMCFLSASI 197
                                                           VL+ +  L    
Sbjct: 215 QEVRDRRRQLEFDLDVLPTKMFLTKLVALIAAVLVVTLLLASYKGAPVVLIILGVLVVGF 274

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +R   I      I  N  A               F        +AG  FAA  +  S
Sbjct: 275 GYLMRNAIIGRHVYAIGGNLPAAKLSGVKDKKVVFLVFLNMGMLAALAGLVFAARFNAAS 334

Query: 258 PDMFKFSENIIVIS-----IVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           P      E   + +       + GG+ ++        +L  +      + 
Sbjct: 335 PKAGLNFELEAIAASFIGGASMSGGVGTVLGAIIGGLVLGVLNNGMNLVG 384


>gi|266620553|ref|ZP_06113488.1| ribose ABC transporter, permease protein [Clostridium hathewayi DSM
           13479]
 gi|288867847|gb|EFD00146.1| ribose ABC transporter, permease protein [Clostridium hathewayi DSM
           13479]
          Length = 319

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 88/293 (30%), Gaps = 26/293 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  VV      +      S   + ++  Q+ ++ +   G+++V+   G + L+     
Sbjct: 17  IYIFLVVVCAFFSVAAPNFLSASNLINILRQVSMFGIVVIGVTMVM-IGGGMDLSVGGQM 75

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       L  +  L I +   V  +   A G + G+ ++K +        +I++    
Sbjct: 76  AVVGMVVGFLLVKLNLPIPVTALVGILTGIAFGTVNGIVAIKLKIMP-----IIVTLSTM 130

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            IL     +  G   I    +                F      Y   +   ++      
Sbjct: 131 LILQGVAYLITGGYPITGMPKP---------------FLMLGQGYIGPIPIPVIIFVLFI 175

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + + +T +      +  N++A       +    +  +A +     +A     A  +
Sbjct: 176 LFGWIVMNKTYLGRMIYALGGNKEAARLAGINVDKLTVMVYAFAGFAASIAALIMVARTN 235

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
              P          + +       I GG   +S       I+  +      M 
Sbjct: 236 ASQPGAGSSYPFDCMTAACLGGISIAGGEGKISGAVIGVIIIGVLDNGLVLMG 288


>gi|239625989|ref|ZP_04669020.1| ABC transporter [Clostridiales bacterium 1_7_47_FAA]
 gi|239520219|gb|EEQ60085.1| ABC transporter [Clostridiales bacterium 1_7_47FAA]
          Length = 326

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/322 (11%), Positives = 86/322 (26%), Gaps = 25/322 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R +    ++ ++ V+  L   +         +I  +        + A G ++ +   G +
Sbjct: 18  RTDSSQVMVYVILVLLLLAAQILSPGYLKPTHIAGILRLASFMGIAAIGQNLTI-LTGGI 76

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+              +      +    +    M+  A G+I G      R     +  
Sbjct: 77  DLSIANTITFANVIAAQIMVGRNENTLTALLAVIMMGMAVGLINGAGIQWLRIPPFIMTL 136

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
                              G   +     L +     +     F        +   +  +
Sbjct: 137 -------------------GVGTVIQGVFLIYTKGAPKGNASPFLKAVCGQSFIGIVSGI 177

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           ++    ++A  I++LR T       +I  N++A             S + +S+    M G
Sbjct: 178 VIIWAVMAAVTIVFLRSTPYGRKIYSIGINEQAARFSGIQTRRVTFSVYLLSAVIAAMTG 237

Query: 247 AFFAASRDRISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGM 301
            F          D+        + ++      I GG  S         I+  + +    +
Sbjct: 238 FFLVGYTGTSFLDVGTSYNTKTIAAVIIGGTAITGGRGSYVGTIAGAVIMTILDDFLTIV 297

Query: 302 NFYYFNSLLKFDCSFNMRHTTL 323
           N       +       +     
Sbjct: 298 NIPEAGRQIMQGVIIILLVLIY 319


>gi|221638697|ref|YP_002524959.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131]
 gi|221159478|gb|ACM00458.1| Inner-membrane translocator [Rhodobacter sphaeroides KD131]
          Length = 329

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 102/324 (31%), Gaps = 33/324 (10%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV----------------- 82
            +  +  ++Y + A G  ++  + G+ +    +     A + V                 
Sbjct: 14  LNGLMAGVMYALVALGFVLIFKASGIFNYAQGVLALFAALTLVGLQNGQIPFAHLINAAF 73

Query: 83  ---ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              +    + L   L I ++A++       +    LK   +   I   + +      L  
Sbjct: 74  GTNLHSFGWTLPAALAIALTALVMVGLAWAIERLILKHLVNQEPIILFMATIGLAYFLEG 133

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +  G     +   L    +     +    F   F I  + +    L    L A++ L
Sbjct: 134 LGDVMWGADIKMLDVGLPQGISEGIEAVTAEWFGYGFFIDRLDI-VATLVAAALVAALTL 192

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           + + T    A R + D+ +A  S+  ++ F  +  ++++     +AG  + A        
Sbjct: 193 FSQYTKYGRALRAVADDHQAALSVGISLRFVWVLVWSIAGFVALIAGIMWGAKSGVQFSL 252

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                  +  + +++LGG TS+        I+    +L             +   +    
Sbjct: 253 S---LIALKALPVLMLGGFTSIPGAIVGGLIIGMGEKLFEFFAGPLIGGATENWFA---- 305

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
                 +   L ++ R   L   R
Sbjct: 306 -----YVLALLFLVFRPQGLFGER 324


>gi|30021077|ref|NP_832708.1| sugar transport system permease protein [Bacillus cereus ATCC
           14579]
 gi|29896630|gb|AAP09909.1| Sugar transport system permease protein [Bacillus cereus ATCC
           14579]
          Length = 338

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/331 (13%), Positives = 102/331 (30%), Gaps = 33/331 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +++ +L +L +V  +L  L      +   +       L   + A  ++ V+   G + ++
Sbjct: 15  RWEGVLIVLLLVEFILFSLINSDFLNISNLLFSTNDFLFIAIAAIPMTFVI-VTGGIDVS 73

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 + +    +L       ++ +I    +   A  +   +  +      +     + 
Sbjct: 74  IGSIMGLTSILIGVLWMNGIPILFAVIIALIISCLAGALNGLIIKMTDVEPLVVTLGTMF 133

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 ++I      +G  GI                        SF+     ++ +++ 
Sbjct: 134 LYGGIALVISGGAGASGYEGISGLP-----------DTFVQLANGSFIGIPNLLWLLIVL 182

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
               +        RT      +    N+              + A+ +S    G+ GAF 
Sbjct: 183 TVLCTVLFH----RTIYGRHVKLTGANENTAKYTGIKTKKVVIIAYILSGLGGGLGGAFL 238

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            A       DM   +   I+ ++V     I GG  S+     A+  +  +          
Sbjct: 239 TAYFGSARADMGSETILPIITAVVLGGTLITGGKGSIIGTVLASIFIGLMQ--------- 289

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
                L+     N +   ++ I L L ++MR
Sbjct: 290 ---YGLQMTGLTNEQSNVVIGIILILSVIMR 317


>gi|296156891|ref|ZP_06839728.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295892777|gb|EFG72558.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 347

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 90/319 (28%), Gaps = 27/319 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +    L  ++V       +      S   + ++ +     ++ A+G  +V+  LG L L+
Sbjct: 32  RTAIALFAISVALIAASRVLGPNFGSLAQMKAILVISSFLMVVAFGQQMVI-LLGGLDLS 90

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +G             ++   +P    I+ A G   G+     +     +     
Sbjct: 91  VASMMTLGGVLAFKWIGGPDSNVVWGVPAILAITAALGACSGIGVSLVKIPPFIMT---- 146

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                        +  G     V         T +          S       +Y ++  
Sbjct: 147 -------------LAMGVILYGVTLGFTQGTPTGQPSAALSALFGSTAAGVPVLYLMVAA 193

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +            RT+       +  N  A +     +    ++ +A+S A  G+AG   
Sbjct: 194 IAAGCFL----QMRTSFGRKLYALGTNPTAAYVAGLPVHRLTIATYAISGASAGLAGILM 249

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
                 ++  + +      V ++V     I+GG       A    +L  +  +   +   
Sbjct: 250 LGYVRGVTLTLGQSYLLPSVAAVVIGGTSIVGGRGIYLGAAAGAILLTTLSTIVSSLGIA 309

Query: 305 YFNSLLKFDCSFNMRHTTL 323
                + +     +    L
Sbjct: 310 EGWRTIIYGAVIFVALVLL 328


>gi|316933490|ref|YP_004108472.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gi|315601204|gb|ADU43739.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 335

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/334 (12%), Positives = 99/334 (29%), Gaps = 40/334 (11%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI--------------- 83
           I +   +   Y + A GL++  G+LG+++      + +GA+  V+               
Sbjct: 8   IMNGLDKGGAYALIALGLTLAFGTLGVVNFAHGALFMLGAFCAVVFNKLLTLEIVKVDPT 67

Query: 84  --------------LGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                                    ++   ++       I  +  +    +   I     
Sbjct: 68  RTTPWGSPLEIKTPYVQDMLGDWGKVLIDYSVPMSILLAIPVMLLIGILIERGLIRFFYK 127

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 IL+ +      +  +        +  +  +L       +  ++Y  +    L  
Sbjct: 128 RPHADQILVTFGLAIVLQEIVKHFFGANPISQSAPALFSGSLQITEAIVYPYWRIVYLCF 187

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              + A +  +L+ T      R    +++    L   I       F +++   G+AG  +
Sbjct: 188 SLVVIALVFAFLQLTTFGMVVRAGMQDRETVGLLGINIERRFTIVFGLAAVVAGLAGVMY 247

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                        F     V+ +V    M SL     A  +L  +           F S+
Sbjct: 248 TPIVPPDYHMGMDFLVLSFVVVVVGG--MGSLPGAVLAGFLLGILQS---------FASM 296

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            +           ++ +   +V+L+R   LL  +
Sbjct: 297 NEVKALVPGIDQIIIYLVAVVVLLVRPRGLLGRK 330


>gi|256393507|ref|YP_003115071.1| Monosaccharide-transporting ATPase [Catenulispora acidiphila DSM
           44928]
 gi|256359733|gb|ACU73230.1| Monosaccharide-transporting ATPase [Catenulispora acidiphila DSM
           44928]
          Length = 323

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 81/301 (26%), Gaps = 30/301 (9%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
              G   S         Q    V+ A G+++V+G+ G + L+     A+ A    +    
Sbjct: 40  AMNGDFMSTSNWRVQLFQAAPTVLVALGMALVIGTEG-VDLSVGATIALAASVIPLYIGY 98

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             +    L  V    +G  G  M   +            ++ +      L     + NG 
Sbjct: 99  GPVPAIALALVLGAAAGLVGGAMVAFAGVQ--------PIVATLSLMIGLRGLAELLNGA 150

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
               VAD                            +  +       +  +   +RRT   
Sbjct: 151 TAKPVADA---------------SILDLGEQSVAGLPLMAWLALAATGVVAYTVRRTTFG 195

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                I DN++A       +    ++ + +S     +AG           P     +  +
Sbjct: 196 RQLVAIGDNKRASLLAGLPVSRVLVTVYVLSGVLAALAGVLIVGHGAEADPANQGLNMEL 255

Query: 268 IVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             I+ V++      GG   +         +  V  +    N     + +       +   
Sbjct: 256 SAITAVVVGGTPLSGGRVRVLGTVAGAMFMQLVSAVLIQHNVPTSTTQIVEAVLICLAVY 315

Query: 322 T 322
            
Sbjct: 316 V 316


>gi|159043082|ref|YP_001531876.1| ribose/xylose/arabinose/galactoside ABC-type transport system
           protein [Dinoroseobacter shibae DFL 12]
 gi|157910842|gb|ABV92275.1| ribose/xylose/arabinose/galactoside ABC-type transport system
           protein [Dinoroseobacter shibae DFL 12]
          Length = 333

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/315 (11%), Positives = 102/315 (32%), Gaps = 16/315 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             + + ++  + +++  +  +      +   +  +    ++  + A G  +V+   G + 
Sbjct: 10  WTRNETLVAGVIMLFCFVATVSDPRFLTITTVSDLLRASIVIGILAVGAMLVL-VSGGID 68

Query: 68  LNCVIAYAIGAYS-YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           ++         YS  V+  + +    W +I V +++ GA    +    + F G    I T
Sbjct: 69  VSFTAIAVFAMYSSTVLSLTIWPEIPWPVIFVISVVFGAALGAINGFFIAFLGLPTLIVT 128

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L    IF+  L+ +                        +                 + + 
Sbjct: 129 LGTLSIFRGFLLTFIGSQRISDLPPSMRDFSRGVIARGTTE---------AGNFYSIPWA 179

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            L + F+       L++T +  +   I  + ++   +   + + +   +    A  G+AG
Sbjct: 180 ALALLFVIVLTWFILKKTMLGRSIYAIGGSVESARRIGINVKWTQFFVYVYVGALAGLAG 239

Query: 247 AFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
               +      P      E  ++ ++V     ++GG  +L+      A+++ V      +
Sbjct: 240 IIHGSVGRMADPFSLVGLELSVIAAVVLGGARLIGGYGTLTGTMLGVALIVIVQNSLIVI 299

Query: 302 NFYYFNSLLKFDCSF 316
                   +      
Sbjct: 300 GIPTTWQSVTIGILI 314


>gi|320329069|gb|EFW85068.1| ribose ABC transporter, ATP-binding protein [Pseudomonas syringae
           pv. glycinea str. race 4]
          Length = 328

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/322 (11%), Positives = 96/322 (29%), Gaps = 27/322 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LRL+     L L+ ++  L++        + +    +  Q  I  + A G++ V+     
Sbjct: 21  LRLSVDRFGLPLVFILLCLVMAFASEYFMTWRNWMDILRQTSINGILAVGMTYVI-LTKG 79

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A       ++ ++    +  +       +    +   + +      ++A  
Sbjct: 80  IDLSVGSILAFAGLCSALVATQGYGLLAAVSAGMFAGAMLGVVNGFMVANLSIPPFVATL 139

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            ++        ++                     G+ V  L   +       +  I +  
Sbjct: 140 GMLSIARGMTFILN-------------------DGSPVTDLPEEYLALGIGRVGPIGVPI 180

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++  +  L   ++L  R T        +  N+K+  +    +     S + VS    G+A
Sbjct: 181 IIFAVVALIFWMVL--RYTTYGRYVYAVGGNEKSARTSGIGVRKVMFSVYVVSGLLAGLA 238

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G   +A      P      E   + ++VI      GG  S+        ++  +      
Sbjct: 239 GVVLSARTTSALPQAGMSYELDAIAAVVIGGTSLSGGTGSIVGTLFGALLIGVINNGLNL 298

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +    +   +            
Sbjct: 299 LGVSSYYQQVAKGLIIVFAVLI 320


>gi|270264580|ref|ZP_06192846.1| transporter [Serratia odorifera 4Rx13]
 gi|270041716|gb|EFA14814.1| transporter [Serratia odorifera 4Rx13]
          Length = 340

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/324 (12%), Positives = 103/324 (31%), Gaps = 23/324 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
            +L     IL + ++V P    + +   +    +  +  +     + A G+++V+   G 
Sbjct: 24  TQLGALAAILLIDSLVAPNFFSIHIQDGRLFGSVIDIVNRGAPVALLALGMTLVIA-TGG 82

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     AI   +   L S      ++L    A+ +        L ++      +A  
Sbjct: 83  IDLSVGAVMAIAGATAATLTSAGYPLGYVLAAALAVGALCGLWNGFLVAVLQIQPIVATL 142

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            L+++      LI    I                                     +++  
Sbjct: 143 MLMVAGRGIAQLITEGQIV---------------------TFEREGLAQLGSGALMYLPM 181

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
             +    +   I L  R+TA+      +  N ++  +   +  +  ++ + +      +A
Sbjct: 182 PAIIAAVMLLLIWLLTRKTALGLFIEAVGINLRSARNAGVSTRWVVMAVYVICGLCAAVA 241

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G    A       +       +  I  V++GG  SL        + +    +  GMN   
Sbjct: 242 GIIVTADIRGADANNAGLWLELDAILAVVIGG-GSLLGGRFNLLLSVVGALIIQGMNTGI 300

Query: 306 FNSLLKFDCSFNMRHTTLMVIALF 329
             S  + + +  ++   ++ + + 
Sbjct: 301 LLSGYRPEFNLVLKAIVVLAVLMI 324


>gi|254461376|ref|ZP_05074792.1| inner-membrane translocator [Rhodobacterales bacterium HTCC2083]
 gi|206677965|gb|EDZ42452.1| inner-membrane translocator [Rhodobacteraceae bacterium HTCC2083]
          Length = 328

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/324 (10%), Positives = 95/324 (29%), Gaps = 31/324 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR----------- 87
             +  +  ++Y + A G  ++  + G+ +    +     A + V +              
Sbjct: 12  FLNGLMAGVLYALVALGFVLIFKASGIFNYAQGVMALFSAMTLVGIMKGQVPFAHVINAI 71

Query: 88  --YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
               +  +     + +       +M L +   +             I     I       
Sbjct: 72  FGTDVHYFGWTVPALLAIILTVAVMVLFAWAVQKYIFRHLVGQEPIILFMATIGLAYFLE 131

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY------VLLGMCFLSASIIL 199
           G   +     +  L   +   I       +F I++   +         L    L   +++
Sbjct: 132 GVGDLMWNSEIKKLDVGLPQGINEAIDNYTFNIFDYGFFIDNLDIVATLIAALLVGGLVI 191

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           + + +    A R + D+ +A  S+  ++ F  +  ++V+     +AG  +          
Sbjct: 192 FSQYSKEGRAMRAVADDHQAALSVGVSLNFIWIMVWSVAGFVALVAGIMWGTKSGVQFSL 251

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                  +  + +++LGG TS+        I+    +L             +   +    
Sbjct: 252 S---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFAIGPMVGGATENWFA---- 304

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
                 +   + ++ R   L   +
Sbjct: 305 -----YVLALIFLVFRPQGLFGEK 323


>gi|328479482|gb|EGF48746.1| branched-chain amino acid ABC transporter permease [Lactobacillus
           rhamnosus MTCC 5462]
          Length = 146

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 2/138 (1%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   I   + V   +L+ +         +I++  + I I ++ A GL++++G  G  SL 
Sbjct: 6   RSKLIWLAIMVAGFVLIDIGEFTGIVNSFIENALVTIGINIILAVGLNLIIGFSGQFSLG 65

Query: 70  CVIAYAIGAYSYVILGSRYGLS--IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                AIGAY+  I+           L      +I+    +I+G+P+L+ RGDYLAIAT+
Sbjct: 66  HAGFMAIGAYATAIVTQDMATPLGFTLPCYWGMVIAVIAALIVGIPTLRLRGDYLAIATM 125

Query: 128 IMSEIFQNILIKWKPITN 145
             +EI + I+   K    
Sbjct: 126 GAAEIIRVIINNLKITNG 143


>gi|320175873|gb|EFW50953.1| Xylose ABC transporter, permease protein XylH [Shigella dysenteriae
           CDC 74-1112]
          Length = 393

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGIKVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|168748057|ref|ZP_02773079.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC4113]
 gi|168755268|ref|ZP_02780275.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC4401]
 gi|168766357|ref|ZP_02791364.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC4486]
 gi|168774456|ref|ZP_02799463.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC4196]
 gi|168780510|ref|ZP_02805517.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC4076]
 gi|195935877|ref|ZP_03081259.1| putative carbohydrate ABC transport system permease [Escherichia
           coli O157:H7 str. EC4024]
 gi|208809210|ref|ZP_03251547.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC4206]
 gi|208812740|ref|ZP_03254069.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC4045]
 gi|208819344|ref|ZP_03259664.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC4042]
 gi|209400838|ref|YP_002273633.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC4115]
 gi|254796111|ref|YP_003080948.1| putative permease of ribose ABC transport system [Escherichia coli
           O157:H7 str. TW14359]
 gi|187769906|gb|EDU33750.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC4196]
 gi|188017499|gb|EDU55621.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC4113]
 gi|189001868|gb|EDU70854.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC4076]
 gi|189357522|gb|EDU75941.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC4401]
 gi|189364312|gb|EDU82731.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC4486]
 gi|208729011|gb|EDZ78612.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC4206]
 gi|208734017|gb|EDZ82704.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC4045]
 gi|208739467|gb|EDZ87149.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC4042]
 gi|209162238|gb|ACI39671.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC4115]
 gi|254595511|gb|ACT74872.1| putative permease of ribose ABC transport system [Escherichia coli
           O157:H7 str. TW14359]
          Length = 324

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/313 (9%), Positives = 93/313 (29%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +         ++  + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 23  ILPILILIVAVFGFITPNFFTESNLLNITRQASINIVLAAGMTFII-LTGGIDLSVGSIL 81

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A + +++      ++  +     +          L +      ++       +    
Sbjct: 82  GTTAVAAMVVSLSPEFAMLSIPAALMLGLLLGLFNGALVAFAGLPPFIVTLGTYTALRGA 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+                           +     F      Y   + ++++    + 
Sbjct: 142 AYLL---------------------ADGTTVINSNINFEWIGNNYLGPVPWLVVIALAVI 180

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 181 VVCWFILRRTTLGVHIYAVGSNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGIMSASRLY 240

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 241 SANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 300

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 301 VIKGAMIIIAVLI 313


>gi|146342686|ref|YP_001207734.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. ORS278]
 gi|146195492|emb|CAL79517.1| putative branched-chain amino acid ABC transporter (permease
           protein) [Bradyrhizobium sp. ORS278]
          Length = 307

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 93/304 (30%), Gaps = 18/304 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                +Y + A G+ ++    G+++        +GAY    L          L+    ++
Sbjct: 14  IATGSVYALIALGIVLIYKCSGVVNFAQGAFVMLGAYLTYGLVKLGLPPYVALLGAMILM 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +G       L         L     +   +   +      +                   
Sbjct: 74  AGCGVASERLVLRPMMKAPLVAVMTVTLGMLILVKAVCLAVWG------------PDQLA 121

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
              L          +          +    LS   + + + T I    R   DN +A  +
Sbjct: 122 FPRLFPDGALDVFGIFITYNYLAAFVLSICLSVGFLAFYQLTPIGLMQRCTADNPRAALA 181

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +          A+++S+A  G+ GA  A+        +      ++   +++LGG+TSL+
Sbjct: 182 IGIHTSNQISLAWSMSAALAGIGGALLASLN---GLSLGLSDIGLVAFPVIVLGGLTSLT 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF---NMRHTTLMVIALFLVILMRSHSL 339
               A  +L  +  L  G+        L+   S          +    L +V+L+R   +
Sbjct: 239 GALVAGLLLGVLQALTDGLLTPVAEQFLRTHTSIYSAGALQQVVPYALLVVVLLVRPEGI 298

Query: 340 LRLR 343
              R
Sbjct: 299 FGQR 302


>gi|13476787|ref|NP_108356.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14027548|dbj|BAB53817.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 324

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/324 (12%), Positives = 97/324 (29%), Gaps = 21/324 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLF----LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           + ++  ++ L+ V    ++F               I ++   +    + A G++ V+ + 
Sbjct: 1   MVRFQSLIGLVVVAIGGIIFSPRRHGQILFLDPDNIANIVRAVSETGIIAIGMTFVIITA 60

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+      + +     +    G  +   I    ++    G I G  S +FR +   
Sbjct: 61  G-IDLSVGAVLGLSSVVTASMMISGGFGLIPTILAVLIMGVVFGAIQGTISTRFRLEPFI 119

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           +            L   +        +     +         L           ++   +
Sbjct: 120 VT-----------LAGLQAARGLALVVSGNQYINISYGDGPGLAPPVFAILGERLFNNTV 168

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
               +     +A   + L  T        +  N++A       +   K+S +A++     
Sbjct: 169 PVATIVFIVFAAIATIVLNTTRFGRYVFAVGGNERAARISGVPVSMVKISVYAITGFASA 228

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +AG   A   +  S +     E   + ++VI      GG  S+      T +L  +  + 
Sbjct: 229 LAGIVHAGQFNFGSANDGMGYELTAIAAVVIGGTSLFGGAGSMVGTVAGTIMLGALANIL 288

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTT 322
              N      LL       +    
Sbjct: 289 QLNNITPAMQLLATAAIIVLAAVL 312


>gi|306842185|ref|ZP_07474854.1| ribose ABC transporter permease [Brucella sp. BO2]
 gi|306287772|gb|EFM59203.1| ribose ABC transporter permease [Brucella sp. BO2]
          Length = 305

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/310 (11%), Positives = 91/310 (29%), Gaps = 17/310 (5%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            ++  +L  +      S   + ++  +     + A G + V+ S G L L+     A  A
Sbjct: 1   MLLLLILGTIANPNFISIDNLLNVATRSAFIAIIALGATYVI-SSGGLDLSVGAMVAFVA 59

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
              ++  +   ++  +L+ ++A++                     I   I +     I  
Sbjct: 60  SIMILFMNSGMIADPVLMLIAAVMLALVVGAACGLLNGIITTVGGIEPFIATLGTMGIYR 119

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                                  T+R+      +  ++    + +   ++ +   +A   
Sbjct: 120 GLTTW-----------LSQGGAITLRNPEIQSLYRPAYFGSVLGVPVPVIVIFVTAALAA 168

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
             L RT        +  N+        ++   +  AF +    + +A   +       S 
Sbjct: 169 FVLYRTRYGRHIIAVGSNEDVARYSGISVKKVRTIAFVIQGLCVAVAVLLYVPRLGSTSA 228

Query: 259 DMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
                 E   + ++V+      GG+  +        IL  +  +    +F     L    
Sbjct: 229 TTGLMWELQAITAVVVGGTALRGGVGRIWGTICGAFILEIIGNIMLLSSFVSEYLLGAIQ 288

Query: 314 CSFNMRHTTL 323
            +  +    +
Sbjct: 289 GAIIIIAMLV 298


>gi|288915926|ref|ZP_06410308.1| inner-membrane translocator [Frankia sp. EUN1f]
 gi|288352555|gb|EFC86750.1| inner-membrane translocator [Frankia sp. EUN1f]
          Length = 477

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 98/302 (32%), Gaps = 21/302 (6%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           ++         +Y + A GL ++  + G+++         GAY Y  LG+   L++ +++
Sbjct: 5   RFALLGLGIGALYTVCAQGLVLIYRASGVVNFAQGAFVMTGAYVYYELGTVRELAMPIVL 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +   + G  G++M    +        +   + +     +L     +           R 
Sbjct: 65  VLVIAVGGVLGLLMHRVLMAPLRHASPLVRAVATLGVLALLQSIAVL-----------RY 113

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                T  +++         V+       +      ++A + +  R +        + +N
Sbjct: 114 THSIVTADAILPHGPVDLGGVVVTEDRMILFGFGLLITAVLWVVYRFSRFGRITAAVAEN 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A      +      + +AV SA   + GA  A  +  +       +  +  ++  +LG
Sbjct: 174 ELAASVTGHSPDVVATANWAVGSALATLTGALVA--QITVLEPSQLAALLLPALAAALLG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G +S      A   +  V  +            +     +      L  I + + ++ R 
Sbjct: 232 GFSSFPLALVAALGIGVVQSVLTF--------EVSQHGWWTGWPQALPFIVVIIYLVFRG 283

Query: 337 HS 338
             
Sbjct: 284 RG 285



 Score = 36.8 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 52/144 (36%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           ++ +            +     L   +    + +V G  G LSL   +  AIGA+  V L
Sbjct: 313 IIAVTGVILVLSDGWVTAMSVTLANAVVGLSVLLVTGYAGQLSLAQYLIGAIGAFIAVKL 372

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
               GL   L      + +   G ++G P+L+ RG  LA++TL ++     + +    + 
Sbjct: 373 MDALGLPFELSFLGGVVSAMIIGAVLGAPALRTRGVNLAVSTLGIAISLYALFLANTQLA 432

Query: 145 NGKAGIYVADRLYFLGTTVRSLIR 168
               G+ V     F          
Sbjct: 433 GSTDGLPVTTPSLFGLDLDPGEHP 456


>gi|254038755|ref|ZP_04872811.1| D-xylose ABC transporter membrane protein [Escherichia sp. 1_1_43]
 gi|226839261|gb|EEH71284.1| D-xylose ABC transporter membrane protein [Escherichia sp. 1_1_43]
          Length = 393

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 52/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GGM S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGMGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|297203071|ref|ZP_06920468.1| ABC transporter permease [Streptomyces sviceus ATCC 29083]
 gi|197712069|gb|EDY56103.1| ABC transporter permease [Streptomyces sviceus ATCC 29083]
          Length = 438

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/347 (11%), Positives = 90/347 (25%), Gaps = 65/347 (18%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  +V   +         S   + ++   +    M A GL  V+  LG + L+     
Sbjct: 64  VVVGLIVIWAIFQFKNDRFLSADNVSNISYYLSATGMIAIGLVFVL-LLGEIDLSVGSVS 122

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +  + +    +G+++WL + ++ +   A G + G    K       +    +     
Sbjct: 123 GLASTLFAVWVVNHGMNVWLALLLAIVTGVAIGSLHGWFFAKVGVPAFVVTLAGLLGW-- 180

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL------- 187
                      G +G                   F             +  VL       
Sbjct: 181 ---NGLMLWLLGSSGTINIPSDSGPIHLFGQSSFFMDQAIVGAYLLAGLAVVLTLVGNFS 237

Query: 188 ----------------------------------------------LGMCFLSASIILWL 201
                                                         +        +   L
Sbjct: 238 EQRRRKAAGVPFRPTVEILVRVGALAIASFLAAAVLNNAAGVSNSLVIFLAALVVVDFVL 297

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
           RRT        +    +A       +   +++ FA+S  F  + G FFA      +    
Sbjct: 298 RRTTYGRQVFAVGGGIEAARRAGINVPMVRITVFAISGGFAAIGGMFFAGQTASATLSAG 357

Query: 262 KFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMN 302
             +  ++ I+  ++      GG  S+        ++  +      +N
Sbjct: 358 GGNTLMLAIAAAVIGGTSLFGGRGSVWSALLGMLVIQSITTGLDLLN 404


>gi|167892164|ref|ZP_02479566.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 7894]
          Length = 310

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 55/312 (17%), Positives = 110/312 (35%), Gaps = 23/312 (7%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +    +  Y        L   + A G++++   LGL+ L+      +G +   +  +  G
Sbjct: 1   VVPAVADAYWIKTLTSALTISIAAAGVALLYRQLGLVCLSQHALLGVGGWI-ALRLAHLG 59

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
               L +   A    A GMI GLP+L+ RG YLA+ TL+M+  FQ ++        G   
Sbjct: 60  APFELCVLAGAAGGSAIGMIAGLPALRLRGLYLALVTLMMAGGFQVVVSAIGFPDGGGG- 118

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                        +    R           +   +  +     L+ ++I   RR+    +
Sbjct: 119 ---------FTGHLSFGARQMMARPLVGQSDAAYFRYVAAWAALAFALIELHRRSKAGRS 169

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
           W  IR  +    +    ++  ++ AF ++    G++G   A S  ++    F  SE++++
Sbjct: 170 WALIRRGEMPALAAGVNVVLYQIWAFGLAGLLAGLSGGLLAGSVGQLDGRAFAASESVLL 229

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
            ++ ++GG+           +L  V  L                             AL 
Sbjct: 230 FALSVVGGVYHWFGALITGLLLRAVPALLTDFG------------VNGYLAMIFFGAALL 277

Query: 330 LVILMRSHSLLR 341
             ++     +  
Sbjct: 278 HALVTAPAGIAG 289


>gi|54302152|ref|YP_132145.1| putative sugar ABC transporter (permease) [Photobacterium profundum
           SS9]
 gi|46915573|emb|CAG22345.1| putative sugar ABC transporter (permease) [Photobacterium profundum
           SS9]
          Length = 338

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/313 (8%), Positives = 90/313 (28%), Gaps = 15/313 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + +   +++ +      +   + ++  Q+    + A G++I++     + L+     
Sbjct: 27  IYFVFIAMCIVMSILSPVFLTVANLLNVMTQMASIGLLALGVTIII-ITRGIDLSSGSVL 85

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A              W +     +      + + +         L    LI      
Sbjct: 86  AVAAVVSASTAQSLD---WGMRMYPNLPELPIIVPILVALAVGALCGLINGALIAYTGIP 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +     +   +    +      + + + S     +   + +   + ++ V+  + ++ 
Sbjct: 143 PFIATLGMMIIARGAALLYSDGRPVSSLIESYQWIGQGTIAGIPVPVVIFLVMAFITYIL 202

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                    T        I  N+ A +     +   K+  +  +    G+A     A  +
Sbjct: 203 L------NYTRFGKYAYAIGGNETAAYVSGINVTKYKILVYVYAGLLAGIAALILTARIN 256

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P +    E   + S  +      GG+ ++        I+  +      +N   +   
Sbjct: 257 SGQPGLGVMYELDAIASATVGGVSHAGGIGTIQGTIVGVMIMGVLQNGLDLLNVSAYWQQ 316

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 317 VVKGLVIVVAVIF 329


>gi|14601324|ref|NP_147859.1| ABC transporter, permease protein [Aeropyrum pernix K1]
 gi|5104982|dbj|BAA80296.1| ABC transporter, permease protein [Aeropyrum pernix K1]
          Length = 294

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 91/297 (30%), Gaps = 27/297 (9%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
             L+Y + A G +IV      ++        + AY   I     G  +  +    A    
Sbjct: 18  MGLLYSLIALGYNIVYRVNKSINFAVPEVVLLAAYLAWIASIATGNLLAAVAIALAASIA 77

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
               +    +    G            +F  +      +  G+  +              
Sbjct: 78  VSMAMERFVAKPLLGRPPIALIGATLGLFYMLKGVVLIVGKGEVAVLPFYP--------- 128

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
                  +   F+         LLG   + A II+  R+T+   A R + ++ +   +  
Sbjct: 129 -----EVYRLGFLTLGTNDVIALLGSIAVLAGIIVLHRKTSFGAAMRGVAEDAEGAAAYG 183

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
             +    L+ +A++    G+A    +          F     II ++  ++ G+ SL  I
Sbjct: 184 LPVRRLMLAGWALAGLVSGLAALLLSIKTQVSPDLEF---FAIIALAASLIAGLDSLGGI 240

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                 L    ++       Y   + +           +    LFLV+L++ + L  
Sbjct: 241 VVGGVFLGLAEQIASKTLDPYLPGIGRD----------IAFFILFLVLLVKPYGLFG 287


>gi|322373817|ref|ZP_08048352.1| ABC transporter, permease protein [Streptococcus sp. C150]
 gi|321277189|gb|EFX54259.1| ABC transporter, permease protein [Streptococcus sp. C150]
          Length = 646

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 92/308 (29%), Gaps = 34/308 (11%)

Query: 36  QKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLL 95
              + +   Q L++ + A G+ I    L L  L    A+ +GA +  I+  R        
Sbjct: 348 SNVVLTAISQGLLWAIMAIGVFITFRILDLADLTAEGAFPLGAATTTIMIIRGIN-PIFA 406

Query: 96  IPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR 155
                +     G + G    K +   L    + ++ ++   L+         AG      
Sbjct: 407 TIGGFVAGMFAGAVSGFMHTKMKIPALLTGIITLTGLYSVNLLVLGSANVSLAGHN---- 462

Query: 156 LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRD 215
                                +     +  + L    L   +++ L  T +  A R   D
Sbjct: 463 -----------TLVTMVMGLGLSKLNGVILLGLIFVSLVVLMLVVLLNTQVGLALRATGD 511

Query: 216 NQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL 275
           N     +    +   K+  + +S+  I ++GA  A +      +M   +    + +I   
Sbjct: 512 NLAMGEANGIKVDRMKILGYMISNGLIALSGALLAQNNGYADMNMGTGTIVNGLAAI--- 568

Query: 276 GGMTSLSKIAKATAILIGVV------ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
                      A  I+  +        +  G   Y    ++    + + +   L    L 
Sbjct: 569 ---------ILAEVIVKYLPLGKRLWSIVLGAVLYRLVLVIILAMNVDAQMLKLASAILL 619

Query: 330 LVILMRSH 337
            +IL    
Sbjct: 620 SIILYVPE 627


>gi|319785008|ref|YP_004144484.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170896|gb|ADV14434.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 287

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 93/303 (30%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   +Y  +A G++++ G + +++++      + +   + + + +GL    ++ V
Sbjct: 7   LVQGVLLGGMYAQYALGMALMFGVMRIVNISHGDLVILLSLIGISIATAWGLGPLPVLIV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++   G ++    L        + +LI +      L              +      
Sbjct: 67  LVPLAVLMGWVLQKAVLNRVVGSDPLPSLIATFGLSIALQNLMLQIWSANSRSLP----- 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I         +   +    VL     L+  + L L+RT    A R    + +
Sbjct: 122 -----GHGIESQSIEIGGIYVGLLPLIVLAVATGLTGGLDLTLKRTRFGRALRAASADVE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A              A A +   +G A  F A        D    ++ I     VI+GGM
Sbjct: 177 AAAMTGINPRAVYAMATAAAVGILGFAAVFQALRSTVAPAD--GPAQLIYAFEAVIIGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++      + +L     +   ++  +                    I   +V+  R   
Sbjct: 235 GTVWGAFVGSMVLGISQAIGFRIDPGFGVLAGH--------------IVFLVVLATRPQG 280

Query: 339 LLR 341
           L  
Sbjct: 281 LFG 283


>gi|262191270|ref|ZP_06049465.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae CT 5369-93]
 gi|262032844|gb|EEY51387.1| galactose/methyl galactoside ABC transport system permease protein
           MglC [Vibrio cholerae CT 5369-93]
          Length = 335

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/315 (8%), Positives = 88/315 (27%), Gaps = 12/315 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  +  +   ++ +   +  S + + ++  Q  + V+ A G++ ++ + G   L+     
Sbjct: 17  IYAVLFILLAVIVIQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQG-TDLSAGRQV 75

Query: 75  AIGAYSYV--ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            + A      +        ++  +    +++    + +    +      +     +   I
Sbjct: 76  GLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAYLKVTPFI 135

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
                +      N      V            +             +    +Y ++ + F
Sbjct: 136 ATLGTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSYITFYAIIAIIF 195

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           +         +T        +  N +A       +    L  +A+S  F    G   A  
Sbjct: 196 MWVL----WNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLEAGR 251

Query: 253 RDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
               + ++    E   + + V+      GG+ S++ +     I   +      +    + 
Sbjct: 252 IGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGVSPYW 311

Query: 308 SLLKFDCSFNMRHTT 322
             +            
Sbjct: 312 QYIIKGSIIIFAVAL 326


>gi|329902909|ref|ZP_08273307.1| Ribose ABC transport system, permease protein RbsC
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327548573|gb|EGF33234.1| Ribose ABC transport system, permease protein RbsC
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 319

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/318 (13%), Positives = 101/318 (31%), Gaps = 27/318 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K    L    V   +L         +   + ++   +   ++ A G++ V+   G + L+
Sbjct: 14  KNYAGLLGTLVALCVLFSFLSDYFFTLNTLRTLANDVPTLLVMAVGMTFVLIIGG-IDLS 72

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+ A    +    +G  ++    +  + + + GM+ GL S+ +R     ++  ++
Sbjct: 73  VGSVMALAASIMSLAMVHWGWPVYAAGMLGMLAAASLGMVTGLISVGWRVPSFIVSLGML 132

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                                 +A  + +  T  R+               + M    + 
Sbjct: 133 E---------------------IARGMAYEVTNSRTEYIGGIVAGISAPVFMGMSPAFMA 171

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              +  +  L L RT +   W  I  N++A          +K+  FA+     G+   F 
Sbjct: 172 AILIVIAGQLVLTRTVLGRLWIGIGTNEEAVRLSGIDPRPSKVLVFALMGLLAGVGALFQ 231

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            +  +   P+     E  ++ ++VI     +GG  S+        I++ +      +   
Sbjct: 232 ISRLEAADPNGGVGLELQVIAAVVIGGTSLMGGRGSVISTFIGVLIIVVLEAGLAQIGVS 291

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +            
Sbjct: 292 EPLKRIVTGLVIVTAVVL 309


>gi|284042031|ref|YP_003392371.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283946252|gb|ADB48996.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 338

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/302 (15%), Positives = 91/302 (30%), Gaps = 29/302 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           RL+     L  +  +  +   +            ++G  + I  + A G +IV+   G  
Sbjct: 29  RLDVVSLALIAVLAIEIVAFSIASPYFLDADNFSNIGRAMTIVGIAAIGQTIVI-IAGGF 87

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A        L +        L    A+++     +           YL I  
Sbjct: 88  DLSVGSVMAAAGMLAAWLVNE------GLTLPLALLAAVVLGVGVGLLNGAVAGYLRINP 141

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           LI +     I+     + +G     VAD                 F +        +  V
Sbjct: 142 LITTLATLAIVRGLAFVISGGEAEVVADA---------------GFLAIGTDSVAGIPVV 186

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           ++ +  L  ++   + RT        +  N +A       +   +L  + +S +   +AG
Sbjct: 187 VVILVVLFLAVGCLMPRTRFGRYTYAVGSNARAARLAGVAVNRWRLVFYGLSGSLAAIAG 246

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCG 300
               A   +  P        + VI+ VIL      GG   L       A+L  +      
Sbjct: 247 CVTVARTGQAEPAAN-MGAELDVITAVILGGTSLNGGRGRLFGTFLGLAVLAVLNNGLIL 305

Query: 301 MN 302
           + 
Sbjct: 306 VG 307


>gi|228997886|ref|ZP_04157489.1| Monosaccharide-transporting ATPase [Bacillus mycoides Rock3-17]
 gi|228761884|gb|EEM10827.1| Monosaccharide-transporting ATPase [Bacillus mycoides Rock3-17]
          Length = 316

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 84/294 (28%), Gaps = 27/294 (9%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           + +   +      +  +    LI V+ A G S V+     + ++      + A    +  
Sbjct: 17  VGIINPSFVQFSSLSLIMKSSLILVILAIGQSFVL-FTKNIDVSVGSIMGLSAAICGMFL 75

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           +     +  +I    + +                    +  +IM+     I+     I  
Sbjct: 76  TNGNSILISIIVAILLGAVIGM------INGVGVTKFRVPAIIMTLGMLGIIRGAMLIYT 129

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
           G   I    + Y                    +  + +   +  +  +   + ++L +  
Sbjct: 130 GGKWIEDIPKSYKQM---------------SSVMILGLPVTVWIILAILLLLYIFLTKAP 174

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
               +    DN+     +   +   K+ AF +S    G+AG  F  +   +        E
Sbjct: 175 FGRYFYAAGDNEDGARLIGIPVDKVKIYAFIISGMSAGVAGCIFVMNIGFVPNQTGTGIE 234

Query: 266 NIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             ++ + V+      GG  S+   A     L  +      +    F +      
Sbjct: 235 LQVIAAAVLGGIHLKGGTGSIFGAALGAIFLEVISSSLVFLKIPAFWNSAISGF 288


>gi|226947021|ref|YP_002802094.1| ABC transporter permease [Azotobacter vinelandii DJ]
 gi|226721948|gb|ACO81119.1| ABC transporter permease [Azotobacter vinelandii DJ]
          Length = 343

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 92/299 (30%), Gaps = 26/299 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + L+ +   L+  LF    + Q ++ +      M +Q+ +  + A G++ V+ + G + L
Sbjct: 29  ILLVLIGIGLVFELFGWVMRDQSFLMNSQRLVLMILQVSVIGLLAIGVTQVIITTG-IDL 87

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +     A+ A     L              S         +  LP+       + +  L 
Sbjct: 88  SSGSVLALSAMVAASLAQ-----------TSEFGRAVFPALTDLPAWVPVMAGIGVGLLA 136

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                  I     P      G+ V+ R      T    I       + +        + L
Sbjct: 137 GLVNGSLIAATGIPPFIVTLGMMVSARGLARYYTEGQPISMLSDSYTAIGSGAMPVIIFL 196

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +    A   + LR T        I  N +A       +    +  ++++    G+AG  
Sbjct: 197 VVA---AIFHIALRYTKYGKYTYAIGGNMQAARISGINVKRHLIIVYSIAGLLAGLAGVV 253

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
            +A        M    E   + + VI      GGM  ++       IL  +      + 
Sbjct: 254 ASARAATGQAGMGLSYELDAIAAAVIGGTSLAGGMGRITGTVIGALILGVMASGFTFLG 312


>gi|329945939|ref|ZP_08293626.1| branched-chain amino acid ABC transporter, permease protein
           [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328528387|gb|EGF55365.1| branched-chain amino acid ABC transporter, permease protein
           [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 439

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/299 (10%), Positives = 82/299 (27%), Gaps = 6/299 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I          ++   G+++     GL ++       +GA +    G  + +     + V
Sbjct: 119 ITDTLTNATPLIIAGLGMAVAF-RAGLFNIGGQGQMILGAITACYAGISWNMPPAAHLIV 177

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + + +   G++ G  +   +    A   ++   +          + + KA     +    
Sbjct: 178 AVVGAALGGLVWGGIAGVLKARTGANEVIVTIMLNSIAAHLLSQLLSLKAFNGEGETGNR 237

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V    ++     S           LL       ++   + R+ +    R    N  
Sbjct: 238 KSLAVADTAQYPSLAGSSFRLHAGFILALLVA----VAVWWLMERSRLGFQLRATGLNAD 293

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  +   ++ +       +S A  G+A         +   +    +     I++ +L G 
Sbjct: 294 AARTAGMSVPWVTSLVMMISGALCGLAATAPVLGTQKGMDESVVGTIGFDAITVALL-GR 352

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           +       A  +   +      M       +       +     +    L   I     
Sbjct: 353 SRPVGTVLAGLLFGALRAGGTAMQAAPGTHIKIVLVLQSTIVLFIAAPPLVRTIFRLPE 411


>gi|326385668|ref|ZP_08207298.1| urea ABC transporter, permease protein UrtB [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326209826|gb|EGD60613.1| urea ABC transporter, permease protein UrtB [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 296

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/310 (17%), Positives = 104/310 (33%), Gaps = 26/310 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY-SYVILGSRYGLSIWLLIP 97
           + +      IY++ A GL++  G + ++++       +G Y ++  LG   G    L+  
Sbjct: 10  LFNGLSLASIYLLAALGLALSFGLMRVINMAHGELLMLGGYFAWGTLGLVPGPLGILVAL 69

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             A +  A    +   +L  R     + TL+ +     IL +      G  G+ V    +
Sbjct: 70  PVAFLGSAAVGAVIETTLIRRLSARPLDTLLGTWGVSLILQQAARDLFGAIGVEVRAPDW 129

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
             G                V       +++L    +  ++ L LRR+ +    R +  ++
Sbjct: 130 LSGAW----------TLGGVTLPSARLFIMLVALAVLGALALLLRRSRLGLLVRAVNQDR 179

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               +         L+ F + S   GMAG   A                +    +V++GG
Sbjct: 180 MMASACGIDAGRVDLAVFCLGSGIAGMAGVMLALLGPV--TPNVGQGYIVPAFLVVVMGG 237

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+     A  IL   + L                         LM++ + + I  R  
Sbjct: 238 LGSILGTTVAALILGLFLALSQIFVD-------------VSIAQMLMLVFVIVFIQFRPQ 284

Query: 338 SLLRLRTPSN 347
            +   RT + 
Sbjct: 285 GVAPARTRAL 294


>gi|291457934|ref|ZP_06597324.1| ABC transporter, permease protein, carbohydrate uptake 2 family
           [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291419478|gb|EFE93197.1| ABC transporter, permease protein, carbohydrate uptake 2 family
           [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 309

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 73/270 (27%), Gaps = 10/270 (3%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G++++       IGA+   +            +      +    +             +
Sbjct: 33  SGVVNIGIEGMMTIGAFVGALAAYYTSNGWIGFLCGGLAGALLGLIHAAACISLHADQTI 92

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           A   +        + +      N                 +  +        SF    I 
Sbjct: 93  AGTAINFIGPGCAVFLCKAIFENSSD-----SPALDTAAKLPKMFVGVFPAGSFAYNVIS 147

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
            Y V      L   +     +T      R + ++ +A  +L   +   + +A  +S    
Sbjct: 148 TYSVAYLSFLLVLLLWFVFFKTRYGMRLRAVGEHPEACATLGINVYRIRYTAVILSGFLA 207

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+ GAF   +            +  I I+ VI G   +         I      LC G+ 
Sbjct: 208 GLGGAFVTLATVSQFRPSVIVGQGFIAIAAVIFGKF-TPQGTLLGCLIFG----LCNGLR 262

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
                S L      +M    + ++ L L +
Sbjct: 263 SLLGGSNLISPHLLSMIPYVVTLLTLILFV 292


>gi|242238428|ref|YP_002986609.1| inner membrane ABC transporter permease YjfF [Dickeya dadantii
           Ech703]
 gi|242130485|gb|ACS84787.1| inner-membrane translocator [Dickeya dadantii Ech703]
          Length = 329

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/339 (13%), Positives = 99/339 (29%), Gaps = 24/339 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++ N    I   + V+  L          S + I ++        + A G++ V+   G 
Sbjct: 2   IKRNLPLMITLAVFVLGYLYCLTRFPGFASTRVICNILTDNAFLGIIAVGMTFVI-LSGG 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A            +GLS  +  P+  ++  A G  MG      +     I 
Sbjct: 61  IDLSVGSVIAFTGVFLAKAIGAWGLSPLVAFPLILLMGCAFGAFMGWLIDALKIPAFIIT 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L     +      +                   +R P    +  + +  
Sbjct: 121 -----------LAGMFFLRGASYLVSEESLPINHPIYDTLSSLAWRIPGGGRLSAMGLLM 169

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +L+         I+  R T   N    I  N  +   +  +     L  + +S+    +A
Sbjct: 170 LLIV-----VLGIVLARHTRFGNQVYAIGGNSTSANLMGISTRSTTLRIYMLSTGLATLA 224

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  F+         +      +  I+ V++GG         +  +   +  L        
Sbjct: 225 GIVFSLYT-SAGYALAGVGVELDAIASVVIGG------TLLSGGVGTVLGTLFGVAIQGL 277

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             + + FD + +   T + +  L  + +     L  L  
Sbjct: 278 IQTYINFDGTLSSWWTKIAIGILLFIFIALQRGLTSLWE 316


>gi|256393840|ref|YP_003115404.1| Monosaccharide-transporting ATPase [Catenulispora acidiphila DSM
           44928]
 gi|256360066|gb|ACU73563.1| Monosaccharide-transporting ATPase [Catenulispora acidiphila DSM
           44928]
          Length = 339

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 85/313 (27%), Gaps = 26/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  V+   ++        S   +  MG  +    + A G S+V+   G + L+     
Sbjct: 35  VIVACVLVFAIIAANAPTYTSVGNLQVMGRDLAQVGILAVGESVVI-LTGGIDLSVGALA 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +            GL   + I ++ +I    G+  G    +       I  +  +    
Sbjct: 94  GLAGILTAWFNVNQGLPAPVAIVLTLVICAGVGLWHGTMVTRLNVPPFVITLVTYTVAQG 153

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L                     + T          F +    Y   +    L      
Sbjct: 154 LAL--------------------AITTGTPINGIDPLFSNLSQYYIGRVPVPALFFLGAV 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     L RT +      +  N++A       +     SA+  S+   G+ G       +
Sbjct: 194 AIAWFALERTYVGRQIYAVGGNREAARLAGIPVARRVTSAYVSSAVLAGVVGVLVIGRMN 253

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P +    E   + + V+      GG   +  IA    +L  +      ++   +   
Sbjct: 254 VADPSVGSGWELTAIAAAVVGGVSLFGGEGRMVGIAAGAILLEFIANGLLALHVNTYYQT 313

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 314 VVQGAVLGAAILL 326


>gi|72160481|ref|YP_288138.1| branched-chain amino acid ABC transporter permease [Thermobifida
           fusca YX]
 gi|71914213|gb|AAZ54115.1| branched-chain amino acid ABC transporter permease protein
           [Thermobifida fusca YX]
          Length = 298

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 88/289 (30%), Gaps = 6/289 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GLS++ G + +L+        IGAY+          +    +  
Sbjct: 8   VVTGLGLGALYFLIASGLSLIFGLMDVLNFAHGAFLTIGAYATWWASVYLPGAGGDGVGF 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              ++          +L             +    +  ++    ++     +  A     
Sbjct: 68  LVAVAFGVAAGTLAATLV-----ELGVIRPLYGRHREQILVTVGLSLAVPALVQAIWGAD 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                R  +                + ++     + A ++L+  RT      R   +++ 
Sbjct: 123 PLPFPRPELVSGTVTLLGAAIPTDRFLLIAVAALVLAGLLLFGTRTRYGLIVRAGVEDRA 182

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +  +    FA+  A   +AGA        I+P     S  +    +V++GG 
Sbjct: 183 MVTALGIDVRKSFTLVFAIGGAAAALAGALGGLYFGVITPFQ-GTSLLVFAFIVVVIGGT 241

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           TS    A A+  +  V +            +        +  T    +A
Sbjct: 242 TSTVGCAVASVAVGMVQQFANYYTVAGLGDIAVVIVLAAVLLTRQGGLA 290


>gi|333000527|gb|EGK20106.1| ribose transport system permease protein rbsC [Shigella flexneri
           VA-6]
          Length = 332

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/317 (11%), Positives = 88/317 (27%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +     L          +  +  ++ GA    +             +ATL +    +
Sbjct: 88  AFVSVCLAFLLQ--FEVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALR 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                            I             + +    L M  L 
Sbjct: 146 GMGLFMTNAQ-------------------PVPIDENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|320332872|ref|YP_004169583.1| ABC transporter integral membrane subunit [Deinococcus maricopensis
           DSM 21211]
 gi|319754161|gb|ADV65918.1| ABC-type transporter, integral membrane subunit [Deinococcus
           maricopensis DSM 21211]
          Length = 322

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 89/286 (31%), Gaps = 23/286 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  +   L   +      +   ++    Q    ++ A G++ V+   G + L+     
Sbjct: 21  ALIALLGLVLFNVVTTPNFLTLNTLNINMTQTATILIVAVGMTYVIA-TGGIDLSVGSIM 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AI      +L     LS  + + ++ ++      + G+              L+     Q
Sbjct: 80  AISGAIAPLLFLNAHLSPGVALGLAVLLPLTAAGLCGVF----------NGLLVTRFHVQ 129

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+        G+    V      +     +           V  ++F+  ++L +    
Sbjct: 130 PIIATLVLFIAGRGIAQVISGGALVNFPPSTFTFLGTARFFGVNIQVFLMLLILAVATWV 189

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                  R T        +  N +A +     +   +++ +A+S    G+AG    A  +
Sbjct: 190 L------RSTLFGRHVVAVGGNAQAAWLSGVPVARTRVAVYAISGMLAGLAGLITIAVNN 243

Query: 255 RISPDMFKFSENIIVISIVILGGMT------SLSKIAKATAILIGV 294
               ++   +  +  I+ V +GG        +L         +  +
Sbjct: 244 SSDANLVGQNMELDAIAAVAVGGTALSGGKVTLFGTLVGALFIQLL 289


>gi|309811303|ref|ZP_07705090.1| branched-chain amino acid ABC transporter, permease protein
           [Dermacoccus sp. Ellin185]
 gi|308434610|gb|EFP58455.1| branched-chain amino acid ABC transporter, permease protein
           [Dermacoccus sp. Ellin185]
          Length = 359

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 99/291 (34%), Gaps = 13/291 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L++ +       +   +   L     +      ++  Q     + A  +++++   G   
Sbjct: 37  LSRPEIGALFGVLAIAVFFLLVAEPFRHMANTGTILYQSATIGIMAVPVALLM-VAGEFD 95

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A      S  +L   +   +W  + +S +I+ A G + G    +       I   
Sbjct: 96  LSAGVAVTTAGLSASLLAWYFNFHVWAAVGLSLLIALAIGALNGFMLNRSGLPSFLITLA 155

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               +    L   + +T G A   ++D   F             F +S  I  + +   +
Sbjct: 156 TFFVLQGVNLGVTRSVTGGVASNDISDMAGFDSAHA-------FFAASMKIGPVNLKIPV 208

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    L+      L RT + N    I D++KA  ++   +   ++  +        ++G 
Sbjct: 209 LFWIVLTIIAAFVLLRTKVGNWIFAIGDDEKAARAVGVPVWKVRVGLYMFVGFCAWLSGM 268

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIG 293
               + +++       +E I +I+ V+      GG  S    +    +   
Sbjct: 269 HLLFAFNQVQSGEGIGNEFIYIIAAVVGGCLLTGGYGSAVGASFGALMFGM 319


>gi|16265169|ref|NP_437961.1| putative sugar uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|307308845|ref|ZP_07588533.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
 gi|307320325|ref|ZP_07599743.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|15141309|emb|CAC49821.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|306894047|gb|EFN24815.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|306900650|gb|EFN31262.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
          Length = 341

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/295 (17%), Positives = 99/295 (33%), Gaps = 22/295 (7%)

Query: 14  ILCLLAVVYPLLLFLFLG--ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
           +L  +A+VY +L +LF+G     + + +  M +Q+ +  + A G++ V+   G + L+  
Sbjct: 30  VLIGIALVYEVLGWLFVGQSFLMNSQRLTIMILQVSVIGIIAVGVTQVI-ITGGIDLSSG 88

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               + A     +                        +  LP++   G  + I  L    
Sbjct: 89  SVVGMTAMISASVAQASTWP-----------RALYPSLTDLPAIVPIGLGVGIGLLAGFI 137

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
             Q I     P      G+ V+ R      T    +       +F+   I+   V L + 
Sbjct: 138 NGQLIARTKIPPFIATLGMMVSARGVSKWYTKGQPVSGLTEQFNFIGTGIWPVIVFLVVA 197

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                  + LR T        I  N +A       +    +  +A++    G+AG   AA
Sbjct: 198 ---LIFHIALRYTRYGKFTYAIGANVQAARVSGINVEAHLVKVYAIAGMLAGLAGVVTAA 254

Query: 252 SRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
                   M    E   + + VI      GG+  ++     T IL  +      +
Sbjct: 255 RAQTAQAGMGVMYELDAIAATVIGGTSLTGGVGRVTGTVIGTVILGVMTSGFTFL 309


>gi|302384524|ref|YP_003820346.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
 gi|302195152|gb|ADL02723.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
          Length = 328

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/322 (13%), Positives = 95/322 (29%), Gaps = 23/322 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +++N    +L    VV   L         S   + ++ +   +  + A G + ++   G 
Sbjct: 9   IKINGDKIVLLAAIVVVFGLFTSLNRNFLSVTNLINILVAASLVGLVAVGHTYLI-IAGQ 67

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
             L+     A    +  +L  +      +    + +++ A G++MGL +          A
Sbjct: 68  NDLSPGSVAAFSGVAAALLVGKG-----VPFGAAVLLTIAGGVLMGLFNSFMVNRIHLEA 122

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            +        I      I  G                    I    F        + +  
Sbjct: 123 FIATLVTQSIIRGFAYIICGG----------------KPISISNKTFLILGKARILNIPL 166

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            +  M        + L +T    +   I  + +A             + + +      + 
Sbjct: 167 SVWIMVICIIIFGIILSKTKFGRSVYAIGGSMEAARLAGLNPQRIIATCYVMMGVLCSIG 226

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  FAA  +         +     I+ VILGG++ +  +      ++G++ +        
Sbjct: 227 GIIFAARMNS-GQPAANVNLEFDAITAVILGGVSFIGGVGNMGGTILGIILIQSFNTGLT 285

Query: 306 FNSLLKFDCSFNMRHTTLMVIA 327
             ++  F          L  +A
Sbjct: 286 MVNVPSFWQFVAKGGLLLFALA 307


>gi|300937176|ref|ZP_07152029.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 21-1]
 gi|300457762|gb|EFK21255.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 21-1]
          Length = 393

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSEINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|284044435|ref|YP_003394775.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283948656|gb|ADB51400.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 328

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 85/309 (27%), Gaps = 36/309 (11%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                   I ++  Q     + A G ++V+   G L L+      + +            
Sbjct: 37  PGGYEPDRILTILGQNAQLGIAAIGQTVVL-LSGGLDLSIGPVMNMASVVSSAGMRGQDG 95

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
           +I   + ++       G++ GL   + +   L                    +  G    
Sbjct: 96  NIAQGVALAIACGAGVGLVNGLLVSRAKIPPL-----------------LATLAVGTIVQ 138

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                                   + V   I  ++++L +      +   L RT     +
Sbjct: 139 GGYYVYTEGQPKGGVAPGLQSAADARVFDTIVPWWLVLWIAVW-VVVAFLLYRTTWGRRF 197

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
                + +A +     +    + A+ +S     +AG    A     S           V 
Sbjct: 198 YAAGASPRAAWLSGVAVSRYVVGAYVLSGICAAIAGVALTAYTGSPSVSGADSYTLQTVA 257

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           + VI      GG+  L+      ++L+ +  +   +N              +     +  
Sbjct: 258 AAVIGGVAFSGGIGRLAGAFAGVSVLVFLSTILDTLN------------VDSAAQYIVQG 305

Query: 326 IALFLVILM 334
             L  ++++
Sbjct: 306 AVLIGMMVV 314


>gi|118592481|ref|ZP_01549872.1| probable D-ribose ABC transporter, permease protein [Stappia
           aggregata IAM 12614]
 gi|118434828|gb|EAV41478.1| probable D-ribose ABC transporter, permease protein [Stappia
           aggregata IAM 12614]
          Length = 336

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 85/270 (31%), Gaps = 17/270 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + K D  L LL +V   ++ L      S   + +    I ++ +F+   + V+ + G + 
Sbjct: 1   MQKKDIGLALLVLVVGSVVALINPRFLSPINLANTANLIGLFGLFSLAEAFVIVTAG-IE 59

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+    +V L    G+   +   +        G I G    + +     +   
Sbjct: 60  LSVGSLIALLGVLFVDLIVVQGVPWPVAALIVLTCGAIFGSIHGWLITRLQLQPFIVTLC 119

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            +           K  T G +       L +L +     +                   +
Sbjct: 120 GLLIYRGVARFYTKDGTAGFSFGDEFPVLEWLISGRTGGVPHS----------------I 163

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +    ++      L RT        +  N++A            + A+ + +   G++  
Sbjct: 164 IAFTVIAVIAWFVLHRTVFGRHLFAVGKNEEAARFTGINTRRVIVLAYVICAVLTGLSAI 223

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGG 277
           FFA     I P        +  I+  +LGG
Sbjct: 224 FFAMYTRSIHPASHGNFYELYAIAAAVLGG 253


>gi|325113107|ref|YP_004277053.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
 gi|326404696|ref|YP_004284778.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|325051558|dbj|BAJ81896.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
 gi|325052574|dbj|BAJ82911.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 355

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 98/320 (30%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +      A++  LL F+     +      ++  Q     + A  +S+++   G   
Sbjct: 32  LKRPEAGALGGAILVFLLFFVVAPPFRQVDAFTTVLYQSATIGIPAVAVSLLM-IGGEFD 90

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L   +A    + +  +  ++   ++W  I  + ++S A G + G   ++ R     + TL
Sbjct: 91  LTAGVAVTTSSLAASMFATKVAGNMWAGIVFALLVSLAIGALNGYLLIRTRLHSF-LVTL 149

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               + Q + I    +  G         +    +        FR     V   I  +++ 
Sbjct: 150 STFLMLQGLNIALTKLVTGNVATGDISHVPGFASAHAIFASTFRIGGVDVSIAILYWFLF 209

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +            RT   N    +  + ++  ++   +   K+  F +        G 
Sbjct: 210 ILVATWVLL------RTRFGNWIFAVGGSDESARAVGVPVRRMKIVLFMLVGFSAWFLGM 263

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
                 + +       +E + + + V+      GG  S         I     E     +
Sbjct: 264 HMLFEYNEVQSGAGVGNELLYIAAAVVGGCLMTGGYGSAIGSGFGAFIFGMTTEGVIYAD 323

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
           +     +     +       
Sbjct: 324 WDPDWFMFFVGATLLTATVV 343


>gi|302340669|ref|YP_003805875.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
 gi|301637854|gb|ADK83281.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
          Length = 337

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 99/315 (31%), Gaps = 18/315 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  + ++Y +++ +      +      +       ++ A GL +VV   G + ++ +   
Sbjct: 15  LFAIILIYSIVVGVVNSGFFNIDTQFDIIRSSSYVMVLAMGL-LVVMLSGGIDISFMAMA 73

Query: 75  AIGAYS-YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             G+Y+   IL S    SI L   +S  +    G+I  L     R         I++   
Sbjct: 74  LFGSYTATKILVSTGSSSILLAFAISMGVGIGLGIINALLVSWLRLPPF-----IITLGT 128

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
            N+         G                  S +         V     + +VL  +   
Sbjct: 129 SNLFHGVMATFIGAKTYGGGRLPPSYSNFGSSTLFKVHTDIGDVGLSTSILFVLGAVLLT 188

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              I     RT +      + ++++A   +    +  ++ A+       G AG  +    
Sbjct: 189 YFLIY----RTTVGRGIVALGNSEEATKRIGYKPLLLRIVAYGYMGLLAGCAGMIYVCQV 244

Query: 254 DRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFN 307
           + + PD       ++V++ VI+GG+        +        I+  +      +      
Sbjct: 245 NAVYPDKM-VGNELMVVAGVIIGGVSISGGKGRILGALLGIFIIYLLNSTLIFLGLTSSW 303

Query: 308 SLLKFDCSFNMRHTT 322
           + L       +    
Sbjct: 304 NQLFVGAILIISVAV 318


>gi|170018006|ref|YP_001728925.1| ABC transporter, permease protein [Leuconostoc citreum KM20]
 gi|169804863|gb|ACA83481.1| ABC transporter, permease protein [Leuconostoc citreum KM20]
          Length = 378

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 86/309 (27%), Gaps = 1/309 (0%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L   A  S + I S+  Q+   ++ A G + V  + G  ++        G    V    
Sbjct: 39  ALLGSAFGSTQDIGSVLTQMTPLILTALGFT-VAQTAGFFNIGLSGQALAGWVGAVWYAL 97

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +      L+  SA+I GA    +      +       + +I++ +   IL+        
Sbjct: 98  SFPNMPVYLMLPSALIIGAGLGALAGAIPGWLRAQFGASEVIVTIMMNYILLFLGNNILQ 157

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                           V +         + +     +   +    F+   +   +++T +
Sbjct: 158 NTMSKGIKVSAETTKQVGANASLQMKWLTDLTQGSSISAGIFISVFMIFVVWFVMKKTTL 217

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R +  N  A      +     + A A+S    G+AG                    
Sbjct: 218 GFEIRAVGLNSDAAKYAGMSAKRNAVIAMAISGGLAGLAGTIEGLGNYLNFFTQNGSPSI 277

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
                 V L G  S   +  A AI   +     GM           D         +   
Sbjct: 278 GFDGMAVALLGGGSYLGVLAAAAIFSVLKIGGLGMPMSSGVPFELVDIVTASIIFFVGAS 337

Query: 327 ALFLVILMR 335
            L  +I  R
Sbjct: 338 YLIKLIQKR 346


>gi|167772145|ref|ZP_02444198.1| hypothetical protein ANACOL_03520 [Anaerotruncus colihominis DSM
           17241]
 gi|167665943|gb|EDS10073.1| hypothetical protein ANACOL_03520 [Anaerotruncus colihominis DSM
           17241]
          Length = 291

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/299 (12%), Positives = 100/299 (33%), Gaps = 28/299 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               +IY M + G+ ++V ++G+L+      + +GAY    L  +  L ++ +  V+ +I
Sbjct: 14  LSMGMIYAMISMGIVLLVRAVGVLNFAQGDLFMLGAYVTYALTYQAHLPLYAMALVALVI 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G +               AT+++S +  +++IK                ++     
Sbjct: 74  FALFGTLFMFSVYWPLRRSTWSATVLISTLGASVVIKEL-----------VKLIWGTVPL 122

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           V   I            E    ++++    L   +     +       +    ++ A   
Sbjct: 123 VSEPIVKGVLVIGTARLEYQYLFIIVIASALILGVFCLFDKLYAGRVMQAAAQDKYAAEL 182

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L    I   ++ + +S + +G+ G   A      +      S  +   + +++GG+ ++ 
Sbjct: 183 LGIPTILTTIATYIISMSLVGIGGYLVAPLFLVSTSLG---SFMLKGFAGMVIGGIGNVK 239

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
                + ++  +                            ++ + L +V+++R      
Sbjct: 240 GAVLGSLLIGIIESFATLFT--------------TTYKDAVVFMVLIVVLIVRPEGFFG 284


>gi|167569980|ref|ZP_02362854.1| hypothetical protein BoklC_09058 [Burkholderia oklahomensis C6786]
          Length = 319

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 78/278 (28%), Gaps = 27/278 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  VV  + +     +  S   ++++  Q+ I  +   G++ V+   G + L+     A
Sbjct: 24  LVGLVVVCIAMVFASDSFLSAANLENVLRQVSINAIIGVGMTCVI-LTGGIDLSVGSVMA 82

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +                        +++G  G       +       A   L ++     
Sbjct: 83  LSGTLTA----------------GLLVAGINGAAALAAGVGVGLALGAANGLFVAFAGMP 126

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +I          G  +     +    +   IRFF       +    +  +++      A
Sbjct: 127 PIIVTLATMGIARGFALIYTGGYPIDGLPDWIRFFGSGKVLGVQMPVLTMLVV-----YA 181

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              L L R         I  N+ A       +   KL  +  +     +A          
Sbjct: 182 LAWLLLERMPFGRYVYAIGGNEHATRLSGVRVARVKLVVYTFAGLTSALAALVLTGRLMS 241

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKAT 288
             P+     E   + ++V     I GG  S+       
Sbjct: 242 GQPNAGVGFELDAIAAVVMGGTSIAGGRGSIVGTLIGA 279


>gi|99078318|ref|YP_611576.1| inner-membrane translocator [Ruegeria sp. TM1040]
 gi|99035456|gb|ABF62314.1| inner-membrane translocator [Ruegeria sp. TM1040]
          Length = 373

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 93/308 (30%), Gaps = 23/308 (7%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            ++  +AV    LLF F     + + + +       +++ A G  +++   G   L+   
Sbjct: 31  GMVGTVAVFTFFLLFAFDSGMFNSQGMMNWATVSAQFMIIAVGACLLM-IAGEFDLSVGS 89

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMS 130
                     I     G  +W+ I ++ ++  A G + G   ++       + +A L + 
Sbjct: 90  MIGFAGMLIAIFSVTLGWPVWMAIMLTFVLCVAIGALNGFIVIRTGLPSFIVTLAFLFIL 149

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY------ 184
             F   L +         GI  A    +L       +    F        I  +      
Sbjct: 150 RGFAIFLPQVIERKTIIGGIKDAAEGDWLAPIFGGKVLTGLFQWMGEAGLIATFERGTRQ 209

Query: 185 ---------YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                     +++    L     + L +T   N       + +A  +    +   K+  F
Sbjct: 210 GQPVVDGVPMLIIWAIVLILFGHILLTKTKFGNWIFAAGGDAEAARNSGVPVNKVKILMF 269

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAI 290
             ++    +              D     E   +I++VI      GG  S+   A    I
Sbjct: 270 MFTAFCATVFAVCQVMEFGSAGADRGLLKEFEAIIAVVIGGALLTGGYGSVLGAALGALI 329

Query: 291 LIGVVELC 298
              V +  
Sbjct: 330 FGVVQQGL 337


>gi|15804114|ref|NP_290153.1| putative xylose transport, membrane component [Escherichia coli
           O157:H7 EDL933]
 gi|15833705|ref|NP_312478.1| membrane component of xylose transport system [Escherichia coli
           O157:H7 str. Sakai]
 gi|16131439|ref|NP_418025.1| D-xylose ABC transporter permease subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|24114844|ref|NP_709354.1| putative xylose transporter, membrane component [Shigella flexneri
           2a str. 301]
 gi|26250210|ref|NP_756250.1| xylose transport system permease xylH [Escherichia coli CFT073]
 gi|30065146|ref|NP_839317.1| putative xylose transporter, membrane component [Shigella flexneri
           2a str. 2457T]
 gi|82545939|ref|YP_409886.1| xylose transport, membrane component [Shigella boydii Sb227]
 gi|89110444|ref|AP_004224.1| D-xylose transporter subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|91213082|ref|YP_543068.1| putative xylose transport system permease xylH [Escherichia coli
           UTI89]
 gi|110643816|ref|YP_671546.1| xylose transport system permease protein XylH [Escherichia coli
           536]
 gi|117625851|ref|YP_859174.1| DNA-binding transcriptional activator, xylose-binding [Escherichia
           coli APEC O1]
 gi|157163045|ref|YP_001460363.1| D-xylose ABC transporter, permease protein [Escherichia coli HS]
 gi|168746886|ref|ZP_02771908.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|168753388|ref|ZP_02778395.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|168759660|ref|ZP_02784667.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|168765983|ref|ZP_02790990.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|168772470|ref|ZP_02797477.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|168779719|ref|ZP_02804726.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|168785440|ref|ZP_02810447.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC869]
 gi|168797406|ref|ZP_02822413.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC508]
 gi|170018201|ref|YP_001723155.1| monosaccharide-transporting ATPase [Escherichia coli ATCC 8739]
 gi|170083077|ref|YP_001732397.1| D-xylose ABC transporter membrane protein [Escherichia coli str.
           K-12 substr. DH10B]
 gi|170683622|ref|YP_001745856.1| D-xylose ABC transporter permease [Escherichia coli SMS-3-5]
 gi|187733005|ref|YP_001882236.1| D-xylose ABC transporter permease [Shigella boydii CDC 3083-94]
 gi|188492792|ref|ZP_03000062.1| D-xylose ABC transporter, permease protein [Escherichia coli 53638]
 gi|191165325|ref|ZP_03027168.1| D-xylose ABC transporter, permease protein [Escherichia coli B7A]
 gi|191170608|ref|ZP_03032161.1| D-xylose ABC transporter, permease protein [Escherichia coli F11]
 gi|193061718|ref|ZP_03042815.1| D-xylose ABC transporter, permease protein [Escherichia coli E22]
 gi|194427411|ref|ZP_03059960.1| D-xylose ABC transporter, permease protein [Escherichia coli B171]
 gi|194435740|ref|ZP_03067843.1| D-xylose ABC transporter, permease protein [Escherichia coli 101-1]
 gi|195935099|ref|ZP_03080481.1| D-xylose ABC transporter membrane protein [Escherichia coli O157:H7
           str. EC4024]
 gi|208807292|ref|ZP_03249629.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208812540|ref|ZP_03253869.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208820273|ref|ZP_03260593.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209398987|ref|YP_002273054.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|209921034|ref|YP_002295118.1| D-xylose ABC transporter permease [Escherichia coli SE11]
 gi|215488853|ref|YP_002331284.1| putative xylose transport, membrane component; membrane component
           of ABC superfamily XylH [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217325095|ref|ZP_03441179.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|218556128|ref|YP_002389041.1| D-xylose ABC transporter membrane protein [Escherichia coli IAI1]
 gi|218560644|ref|YP_002393557.1| D-xylose transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|218702334|ref|YP_002409963.1| D-xylose ABC transporter membrane protein [Escherichia coli IAI39]
 gi|237703340|ref|ZP_04533821.1| D-xylose ABC transporter [Escherichia sp. 3_2_53FAA]
 gi|238902658|ref|YP_002928454.1| D-xylose transporter subunit [Escherichia coli BW2952]
 gi|254795525|ref|YP_003080362.1| D-xylose ABC transporter membrane protein [Escherichia coli O157:H7
           str. TW14359]
 gi|256020916|ref|ZP_05434781.1| D-xylose transporter subunit, membrane component of ABC superfamily
           protein [Shigella sp. D9]
 gi|256025703|ref|ZP_05439568.1| D-xylose transporter subunit, membrane component of ABC superfamily
           protein [Escherichia sp. 4_1_40B]
 gi|260846717|ref|YP_003224495.1| putative xylose transport, membrane component [Escherichia coli
           O103:H2 str. 12009]
 gi|260858036|ref|YP_003231927.1| putative xylose transport, membrane component [Escherichia coli
           O26:H11 str. 11368]
 gi|260870299|ref|YP_003236701.1| putative xylose transport, membrane component [Escherichia coli
           O111:H- str. 11128]
 gi|261224887|ref|ZP_05939168.1| D-xylose transporter subunit, membrane component of ABC superfamily
           protein [Escherichia coli O157:H7 str. FRIK2000]
 gi|261254214|ref|ZP_05946747.1| putative xylose transport, membrane component [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291284945|ref|YP_003501763.1| Xylose transport system permease protein xylH [Escherichia coli
           O55:H7 str. CB9615]
 gi|293453878|ref|ZP_06664297.1| xylose ABC transporter [Escherichia coli B088]
 gi|300815202|ref|ZP_07095427.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 107-1]
 gi|300822029|ref|ZP_07102172.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 119-7]
 gi|300902760|ref|ZP_07120715.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 84-1]
 gi|300920453|ref|ZP_07136887.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 115-1]
 gi|300930921|ref|ZP_07146286.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 187-1]
 gi|300950341|ref|ZP_07164271.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 116-1]
 gi|300971428|ref|ZP_07171463.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 45-1]
 gi|300976968|ref|ZP_07173703.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 200-1]
 gi|301047077|ref|ZP_07194178.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 185-1]
 gi|301304622|ref|ZP_07210731.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 124-1]
 gi|301645997|ref|ZP_07245903.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 146-1]
 gi|307140260|ref|ZP_07499616.1| Xylose transport system permease protein xylH [Escherichia coli
           H736]
 gi|307314637|ref|ZP_07594237.1| inner-membrane translocator [Escherichia coli W]
 gi|309797574|ref|ZP_07691963.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 145-7]
 gi|312968089|ref|ZP_07782300.1| branched-chain amino acid transport system / permease component
           family protein [Escherichia coli 2362-75]
 gi|312972154|ref|ZP_07786328.1| branched-chain amino acid transport system / permease component
           family protein [Escherichia coli 1827-70]
 gi|331644281|ref|ZP_08345410.1| xylose transport system permease protein XylH [Escherichia coli
           H736]
 gi|331649399|ref|ZP_08350485.1| xylose transport system permease protein XylH [Escherichia coli
           M605]
 gi|331655204|ref|ZP_08356203.1| xylose transport system permease protein XylH [Escherichia coli
           M718]
 gi|331670402|ref|ZP_08371241.1| xylose transport system permease protein XylH [Escherichia coli
           TA271]
 gi|331675057|ref|ZP_08375814.1| xylose transport system permease protein XylH [Escherichia coli
           TA280]
 gi|331679649|ref|ZP_08380319.1| xylose transport system permease protein XylH [Escherichia coli
           H591]
 gi|332282137|ref|ZP_08394550.1| xylose transport system permease XylH [Shigella sp. D9]
 gi|84029536|sp|P0AGI6|XYLH_ECO57 RecName: Full=Xylose transport system permease protein xylH
 gi|84029537|sp|P0AGI5|XYLH_ECOL6 RecName: Full=Xylose transport system permease protein xylH
 gi|84029538|sp|P0AGI4|XYLH_ECOLI RecName: Full=Xylose transport system permease protein xylH
 gi|84029539|sp|P0AGI7|XYLH_SHIFL RecName: Full=Xylose transport system permease protein xylH
 gi|12518306|gb|AAG58717.1|AE005583_9 putative xylose transport, membrane component [Escherichia coli
           O157:H7 str. EDL933]
 gi|26110639|gb|AAN82824.1|AE016768_242 Xylose transport system permease protein xylH [Escherichia coli
           CFT073]
 gi|466706|gb|AAB18545.1| xylH [Escherichia coli str. K-12 substr. MG1655]
 gi|1789992|gb|AAC76592.1| D-xylose ABC transporter permease subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|13363925|dbj|BAB37874.1| putative membrane component of xylose transport system [Escherichia
           coli O157:H7 str. Sakai]
 gi|24054078|gb|AAN45061.1| putative xylose transporter, membrane component [Shigella flexneri
           2a str. 301]
 gi|30043407|gb|AAP19128.1| putative xylose transporter, membrane component [Shigella flexneri
           2a str. 2457T]
 gi|81247350|gb|ABB68058.1| putative xylose transport, membrane component [Shigella boydii
           Sb227]
 gi|85676475|dbj|BAE77725.1| D-xylose transporter subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|91074656|gb|ABE09537.1| putative xylose transport system permease protein xylH [Escherichia
           coli UTI89]
 gi|110345408|gb|ABG71645.1| xylose transport system permease protein XylH [Escherichia coli
           536]
 gi|115514975|gb|ABJ03050.1| DNA-binding transcriptional activator, xylose-binding [Escherichia
           coli APEC O1]
 gi|157068725|gb|ABV07980.1| D-xylose ABC transporter, permease protein [Escherichia coli HS]
 gi|169753129|gb|ACA75828.1| Monosaccharide-transporting ATPase [Escherichia coli ATCC 8739]
 gi|169890912|gb|ACB04619.1| D-xylose transporter subunit; membrane component of ABC superfamily
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170521340|gb|ACB19518.1| D-xylose ABC transporter, permease protein [Escherichia coli
           SMS-3-5]
 gi|187429997|gb|ACD09271.1| D-xylose ABC transporter, permease protein [Shigella boydii CDC
           3083-94]
 gi|187771365|gb|EDU35209.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|188018239|gb|EDU56361.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|188487991|gb|EDU63094.1| D-xylose ABC transporter, permease protein [Escherichia coli 53638]
 gi|189002598|gb|EDU71584.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|189359133|gb|EDU77552.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|189364735|gb|EDU83154.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|189369900|gb|EDU88316.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|189374513|gb|EDU92929.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC869]
 gi|189379993|gb|EDU98409.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC508]
 gi|190904727|gb|EDV64433.1| D-xylose ABC transporter, permease protein [Escherichia coli B7A]
 gi|190909416|gb|EDV69002.1| D-xylose ABC transporter, permease protein [Escherichia coli F11]
 gi|192932508|gb|EDV85105.1| D-xylose ABC transporter, permease protein [Escherichia coli E22]
 gi|194414451|gb|EDX30724.1| D-xylose ABC transporter, permease protein [Escherichia coli B171]
 gi|194425283|gb|EDX41267.1| D-xylose ABC transporter, permease protein [Escherichia coli 101-1]
 gi|208727093|gb|EDZ76694.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208733817|gb|EDZ82504.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208740396|gb|EDZ88078.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209160387|gb|ACI37820.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|209755110|gb|ACI75867.1| putative membrane component of xylose transport system [Escherichia
           coli]
 gi|209755112|gb|ACI75868.1| putative membrane component of xylose transport system [Escherichia
           coli]
 gi|209755114|gb|ACI75869.1| putative membrane component of xylose transport system [Escherichia
           coli]
 gi|209755116|gb|ACI75870.1| putative membrane component of xylose transport system [Escherichia
           coli]
 gi|209914293|dbj|BAG79367.1| D-xylose ABC transporter permease component [Escherichia coli SE11]
 gi|215266925|emb|CAS11368.1| putative xylose transport, membrane component; membrane component
           of ABC superfamily XylH [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217321316|gb|EEC29740.1| D-xylose ABC transporter, permease protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|218362896|emb|CAR00530.1| D-xylose transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI1]
 gi|218367413|emb|CAR05195.1| D-xylose transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|218372320|emb|CAR20188.1| D-xylose transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI39]
 gi|226902604|gb|EEH88863.1| D-xylose ABC transporter [Escherichia sp. 3_2_53FAA]
 gi|238861021|gb|ACR63019.1| D-xylose transporter subunit [Escherichia coli BW2952]
 gi|254594925|gb|ACT74286.1| D-xylose transporter subunit, membrane component of ABC superfamily
           [Escherichia coli O157:H7 str. TW14359]
 gi|257756685|dbj|BAI28187.1| putative xylose transport, membrane component [Escherichia coli
           O26:H11 str. 11368]
 gi|257761864|dbj|BAI33361.1| putative xylose transport, membrane component [Escherichia coli
           O103:H2 str. 12009]
 gi|257766655|dbj|BAI38150.1| putative xylose transport, membrane component [Escherichia coli
           O111:H- str. 11128]
 gi|260447414|gb|ACX37836.1| Monosaccharide-transporting ATPase [Escherichia coli DH1]
 gi|281180613|dbj|BAI56943.1| D-xylose ABC transporter permease component [Escherichia coli SE15]
 gi|281602935|gb|ADA75919.1| Xylose transport system permease protein xylH [Shigella flexneri
           2002017]
 gi|290764818|gb|ADD58779.1| Xylose transport system permease protein xylH [Escherichia coli
           O55:H7 str. CB9615]
 gi|291322004|gb|EFE61435.1| xylose ABC transporter [Escherichia coli B088]
 gi|294493343|gb|ADE92099.1| D-xylose ABC transporter, permease protein [Escherichia coli
           IHE3034]
 gi|300300994|gb|EFJ57379.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 185-1]
 gi|300308438|gb|EFJ62958.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 200-1]
 gi|300405188|gb|EFJ88726.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 84-1]
 gi|300411262|gb|EFJ94800.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 45-1]
 gi|300412586|gb|EFJ95896.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 115-1]
 gi|300450307|gb|EFK13927.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 116-1]
 gi|300461240|gb|EFK24733.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 187-1]
 gi|300525392|gb|EFK46461.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 119-7]
 gi|300532094|gb|EFK53156.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 107-1]
 gi|300840100|gb|EFK67860.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 124-1]
 gi|301075749|gb|EFK90555.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 146-1]
 gi|306905850|gb|EFN36374.1| inner-membrane translocator [Escherichia coli W]
 gi|307628650|gb|ADN72954.1| Xylose transport system permease protein xylH [Escherichia coli
           UM146]
 gi|308118844|gb|EFO56106.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 145-7]
 gi|309703971|emb|CBJ03314.1| D-xylose ABC transporter, permease protein [Escherichia coli ETEC
           H10407]
 gi|310334531|gb|EFQ00736.1| branched-chain amino acid transport system / permease component
           family protein [Escherichia coli 1827-70]
 gi|312287348|gb|EFR15257.1| branched-chain amino acid transport system / permease component
           family protein [Escherichia coli 2362-75]
 gi|313647561|gb|EFS12011.1| branched-chain amino acid transport system / permease component
           family protein [Shigella flexneri 2a str. 2457T]
 gi|315062855|gb|ADT77182.1| D-xylose transporter subunit [Escherichia coli W]
 gi|315138146|dbj|BAJ45305.1| xylose transport system permease protein xylH [Escherichia coli
           DH1]
 gi|315254098|gb|EFU34066.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 85-1]
 gi|315285336|gb|EFU44781.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 110-3]
 gi|315294124|gb|EFU53476.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 153-1]
 gi|315300111|gb|EFU59349.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 16-3]
 gi|315618392|gb|EFU98979.1| branched-chain amino acid transport system / permease component
           family protein [Escherichia coli 3431]
 gi|320187725|gb|EFW62400.1| Xylose ABC transporter, permease protein XylH [Shigella flexneri
           CDC 796-83]
 gi|320191375|gb|EFW66025.1| Xylose ABC transporter, permease protein XylH [Escherichia coli
           O157:H7 str. EC1212]
 gi|320201410|gb|EFW75991.1| Xylose ABC transporter, permease protein XylH [Escherichia coli
           EC4100B]
 gi|320639889|gb|EFX09483.1| Xylose transport system permease protein xylH [Escherichia coli
           O157:H7 str. G5101]
 gi|320655894|gb|EFX23817.1| Xylose transport system permease protein xylH [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320666698|gb|EFX33681.1| Xylose transport system permease protein xylH [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323155471|gb|EFZ41651.1| branched-chain amino acid transport system / permease component
           family protein [Escherichia coli EPECa14]
 gi|323160663|gb|EFZ46602.1| branched-chain amino acid transport system / permease component
           family protein [Escherichia coli E128010]
 gi|323179467|gb|EFZ65034.1| branched-chain amino acid transport system / permease component
           family protein [Escherichia coli 1180]
 gi|323376554|gb|ADX48822.1| inner-membrane translocator [Escherichia coli KO11]
 gi|323934877|gb|EGB31259.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli E1520]
 gi|323944534|gb|EGB40605.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H120]
 gi|323949812|gb|EGB45696.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H252]
 gi|323954887|gb|EGB50667.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H263]
 gi|323959385|gb|EGB55045.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H489]
 gi|323966000|gb|EGB61442.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli M863]
 gi|323971330|gb|EGB66572.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli TA007]
 gi|323975019|gb|EGB70128.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli TW10509]
 gi|324007355|gb|EGB76574.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 57-2]
 gi|324014223|gb|EGB83442.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 60-1]
 gi|324017924|gb|EGB87143.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 117-3]
 gi|324116552|gb|EGC10469.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli E1167]
 gi|326337427|gb|EGD61262.1| Xylose ABC transporter, permease protein XylH [Escherichia coli
           O157:H7 str. 1044]
 gi|326339952|gb|EGD63759.1| Xylose ABC transporter, permease protein XylH [Escherichia coli
           O157:H7 str. 1125]
 gi|327251220|gb|EGE62913.1| branched-chain amino acid transport system / permease component
           family protein [Escherichia coli STEC_7v]
 gi|330909631|gb|EGH38145.1| xylose ABC transporter, permease protein XylH [Escherichia coli
           AA86]
 gi|331036575|gb|EGI08801.1| xylose transport system permease protein XylH [Escherichia coli
           H736]
 gi|331041897|gb|EGI14041.1| xylose transport system permease protein XylH [Escherichia coli
           M605]
 gi|331047219|gb|EGI19297.1| xylose transport system permease protein XylH [Escherichia coli
           M718]
 gi|331062464|gb|EGI34384.1| xylose transport system permease protein XylH [Escherichia coli
           TA271]
 gi|331067966|gb|EGI39364.1| xylose transport system permease protein XylH [Escherichia coli
           TA280]
 gi|331072821|gb|EGI44146.1| xylose transport system permease protein XylH [Escherichia coli
           H591]
 gi|332089448|gb|EGI94552.1| branched-chain amino acid transport system / permease component
           family protein [Shigella boydii 3594-74]
 gi|332104489|gb|EGJ07835.1| xylose transport system permease XylH [Shigella sp. D9]
 gi|332345537|gb|AEE58871.1| conserved hypothetical protein [Escherichia coli UMNK88]
 gi|332749982|gb|EGJ80394.1| branched-chain amino acid transport system / permease component
           family protein [Shigella flexneri K-671]
 gi|332750139|gb|EGJ80550.1| branched-chain amino acid transport system / permease component
           family protein [Shigella flexneri 4343-70]
 gi|332751427|gb|EGJ81830.1| branched-chain amino acid transport system / permease component
           family protein [Shigella flexneri 2747-71]
 gi|332764229|gb|EGJ94466.1| xylH [Shigella flexneri 2930-71]
 gi|332996361|gb|EGK15988.1| branched-chain amino acid transport system / permease component
           family protein [Shigella flexneri VA-6]
 gi|332996933|gb|EGK16552.1| branched-chain amino acid transport system / permease component
           family protein [Shigella flexneri K-272]
 gi|332997406|gb|EGK17022.1| branched-chain amino acid transport system / permease component
           family protein [Shigella flexneri K-218]
 gi|333012903|gb|EGK32280.1| branched-chain amino acid transport system / permease component
           family protein [Shigella flexneri K-304]
 gi|333013380|gb|EGK32752.1| branched-chain amino acid transport system / permease component
           family protein [Shigella flexneri K-227]
          Length = 393

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|293417595|ref|ZP_06660217.1| ribose transport system permease [Escherichia coli B185]
 gi|331655918|ref|ZP_08356906.1| sugar transport system permease protein [Escherichia coli M718]
 gi|291430313|gb|EFF03311.1| ribose transport system permease [Escherichia coli B185]
 gi|331046272|gb|EGI18362.1| sugar transport system permease protein [Escherichia coli M718]
          Length = 324

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/313 (9%), Positives = 93/313 (29%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +         ++  + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 23  ILPILILIVAVFGFIAPNFFTESNLLNITRQASINIVLAAGMTFII-LTGGIDLSVGSIL 81

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A + +++      ++  +     +          L +      ++       +    
Sbjct: 82  GTTAVAAMVVSLSPEFAMLSIPAALMLGLLLGLFNGALVAFAGLPPFIVTLGTYTALRGA 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+                           +     F      Y   + ++++    + 
Sbjct: 142 AYLL---------------------ADGTTVINSNINFEWIGNNYLGPVPWLVVIALAVI 180

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 181 VVCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGIMSASRLY 240

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 241 SANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 300

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 301 VIKGAVIIIAVLI 313


>gi|320010974|gb|ADW05824.1| inner-membrane translocator [Streptomyces flavogriseus ATCC 33331]
          Length = 414

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/350 (12%), Positives = 84/350 (24%), Gaps = 55/350 (15%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +   +L  L ++  L      G     + + ++ +Q    ++ A G+ +V+   G +
Sbjct: 36  RNMRQYGMLMALGLIVVLFAVWSDGDLLLPRNVSNLVLQNSYILILAIGMMLVI-IAGHI 94

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A       +L   + +   L + +   I    G + G            +  
Sbjct: 95  DLSVGSLTAFIGAMAAVLMVEHDMPWPLAVVLCLAIGAVAGSVQGFFIAYLGIPSFIVTL 154

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
             M        I  K  T G     + +        V     +           I    +
Sbjct: 155 AGMLLFRGLTEIFLKGQTLGPFPKDLQEIANGFLPEVGPNTNYHNLTLLLGFALIAFVVL 214

Query: 187 -------------------------------------------------LLGMCFLSASI 197
                                                            LL +  L    
Sbjct: 215 QEVRDRKRQQEFALEVLPGKLFVLKLVALVSAVLVVTLLLASYKGAPVVLLILGVLVVGF 274

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +R   I      I  N  A               F        +AG  FAA  +  S
Sbjct: 275 GYLMRNAIIGRHIYAIGGNLPAAKLSGVKDKKVTFLVFLNMGMLAALAGLVFAARFNAAS 334

Query: 258 PDMFKFSENIIVIS-----IVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           P      E   + +       + GG+ ++        +L  +      + 
Sbjct: 335 PKAGLNFELEAIAASFIGGASMSGGVGTVLGAIIGGLVLGVLNNGMNLVG 384


>gi|269121636|ref|YP_003309813.1| inner-membrane translocator [Sebaldella termitidis ATCC 33386]
 gi|268615514|gb|ACZ09882.1| inner-membrane translocator [Sebaldella termitidis ATCC 33386]
          Length = 381

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/336 (11%), Positives = 87/336 (25%), Gaps = 47/336 (13%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            +   L V++ + + +  G   + + I ++  Q+ I  + + G+  V+   G + L+   
Sbjct: 17  ILFLALLVIWGVFIAITGGNFINFRNISNLLRQMSITGILSIGMIFVI-ISGEIDLSVGS 75

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA------- 125
             A+      I+     L   + + V+ ++    G+  G    K       +        
Sbjct: 76  QMALLGGIAAIMDVTLKLPFIVTVLVTLVLGLVFGVWNGYWIAKKNVPSFIVTLSGMLVF 135

Query: 126 ----------------------------------TLIMSEIFQNILIKWKPITNGKAGIY 151
                                              + +  +   +  K        A   
Sbjct: 136 RGILIGITGGQTISPISGAFKILGQSYIPKSLSYIIGILFVLLLVYSKMSDRKAKIANKI 195

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                      +             +     +   +L M  L         +TA      
Sbjct: 196 ETGDFKNDLMWIIGNSILIFLGIIILNSYEGIPTPVLLMAVLIIIFSFVSNKTAYGRTVY 255

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            I  N  A           K+  + V+   +  AG    +     S      +E   + +
Sbjct: 256 AIGGNINAAKYSGIDTQKIKMIIYIVNGFLVATAGLVLTSRLGAGSVSAGTNAELDTIAA 315

Query: 272 IVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
            VI      GG   ++       I+  +      +N
Sbjct: 316 CVIGGASLSGGKGKVTGAILGALIMASLDNGMSMLN 351


>gi|239625801|ref|ZP_04668832.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239520031|gb|EEQ59897.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47FAA]
          Length = 323

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/321 (14%), Positives = 90/321 (28%), Gaps = 28/321 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             K    L  L  +         G   ++  I ++  QI I  +   G+++++   G + 
Sbjct: 16  FAKKYGTLVALFAICVFFTIRCPGVFLTKSNIITVLRQISILAVMGAGMTVIM-IGGGID 74

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+C    +        L  +YGL +WL    +       G+  GL     R         
Sbjct: 75  LSCGYNVSFCGIIAATLYQQYGLPLWLAAIGALAFGSLIGLFNGLLVAYVRIPAFICTM- 133

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                               AG  +                   F +  +     +   +
Sbjct: 134 -------------------SAGFLIQGLNQAYTKGYPISGLNNAFDTYALKTTFGIPNAI 174

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             M      I + L  T        +  N +A       I   +L A+ +S   + +A  
Sbjct: 175 YIMAAFMILIYVLLNHTKFGRNCYAMGGNAEATMMSGVNINMTQLLAYVLSGFGMAVASL 234

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILG------GMTSLSKIAKATAILIGVVELCCGM 301
              +      P       N+  +++V LG      G  +L        I+  +V     M
Sbjct: 235 ILLSRLGAAHPTA-GDGYNMTCVAVVFLGSTMFREGEHNLMGSFFGALIMGILVNGMTLM 293

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
           N  Y+   +       +    
Sbjct: 294 NLPYYYQNIAQGAVILLAVAV 314


>gi|330467270|ref|YP_004405013.1| D-ribose transport system permease [Verrucosispora maris AB-18-032]
 gi|328810241|gb|AEB44413.1| D-ribose transport system permease protein [Verrucosispora maris
           AB-18-032]
          Length = 342

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 91/293 (31%), Gaps = 26/293 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L      +   + + +      +     + +   +   GL+ V+   G + L+     
Sbjct: 19  ILLAFTAVAIGFAVAVPSFAEGDSVRYYLNEEVPIFIITAGLAFVI-IAGGIDLSVGAVL 77

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A +  +  S  G +  L + V      A G++ GL  +KFR                
Sbjct: 78  GLSAGTS-LWASMQGFNPLLSVFVGVGTGLAFGLVNGLVIVKFR---------------- 120

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +    +T G   I     +               F          +   ++      
Sbjct: 121 ---LNDFIVTLGTLNIAAGLLVVLTNHVQLVGTSDETFLGIAGTTVGGLTSAMVLTAGTI 177

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A++ L L +TA     R           L   +   +L A+ VS A  G+ G   AA  +
Sbjct: 178 AALHLVLVKTAFGRRIRAAGMGSAPALVLGLDVGRLRLYAYLVSGALAGLGGVLLAARLN 237

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
            +   M    E I + + V     + GG   + +      +L+ + +    M 
Sbjct: 238 SVQSGMAGGYELIAIAAAVLGGVSLTGGRGGIWQAVLGALLLVTLKQGFRLMG 290


>gi|330809451|ref|YP_004353913.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327377559|gb|AEA68909.1| putative branched-chain amino acid ABC transporter, permease
           component [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 293

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 95/305 (31%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A ++ +     G+  WL   +
Sbjct: 8   LIGGLLAGVMYALVAIGFVLIYKASGVFNFAQGAMVLFSALTF-VSLLERGVPFWLAFLI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S        + +    L+   +   I   + +     ++  +     G            
Sbjct: 67  SLAAMLLIAVAVERVVLRPLVNRSPITLFMATLGLSYVIEGFAQALWGAQ---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F  +  L    L   +     +T +  + R + D+  
Sbjct: 117 -VHGLELGISDEPLELGGMLLSQFDIFAALTAALLVLLLSWLFNKTRLGLSLRAVADDPL 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +    +  +AV+     +AG  + A               +  + ++I+GG 
Sbjct: 176 AALAVGIRLQRVWVVVWAVAGFVGLVAGLLWGARLGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+S       I+    +L       +  S ++              +   L +L+R   
Sbjct: 233 TSISGAIVGGLIIGASEKLAEVYLGPFIGSGIENWFP---------YVLALLFLLVRPAG 283

Query: 339 LLRLR 343
           L   R
Sbjct: 284 LFGER 288


>gi|300785714|ref|YP_003766005.1| branched-chain amino acid ABC transporter ATPase/permease
           [Amycolatopsis mediterranei U32]
 gi|299795228|gb|ADJ45603.1| fused ATPase and permease components of ABC-type branched-chain
           amino acid transport system [Amycolatopsis mediterranei
           U32]
          Length = 894

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 64/217 (29%), Gaps = 9/217 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            ++ +      IY +   GL +   S G+ +        + AY +  L +  GL   L +
Sbjct: 6   PFVVAGVAAGAIYGLAGTGLVLTYKSSGIFNFGHGAIATVAAYVFYALHTGLGLPWVLAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +  I+G    ++                ++ +      +     +  G   I V   L
Sbjct: 66  IAAVGIAGPVIGLLMEVIAARLAPQRVALQIVGTVGIILAVQGLATLGYGANTIQVDQWL 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                T R             +       ++       A++    R + I  A R + D+
Sbjct: 126 PAGQATFR---------LFGTVVTWGQVTIVAIAVVAVAALYAMFRFSRIGLAMRAVVDD 176

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
                   T     +  A+ + S F  ++G       
Sbjct: 177 PDLLAMQATDPRRVRRIAWVIGSTFTALSGVLVMPLI 213



 Score = 36.8 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 85/207 (41%), Gaps = 18/207 (8%)

Query: 44  IQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS 103
           I  LI  +    L ++V + G +SL      AIGA ++       GL   + + +  ++ 
Sbjct: 338 IAALIGAVLLLSLGLLVRTSGQVSLCHAAFAAIGAVAFSQFAVDLGLPWVVSLLLGGLVV 397

Query: 104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTV 163
              G ++ LP+++  G +LA+AT     + Q +L     +    +      R        
Sbjct: 398 VPVGALVALPAIRLSGLFLALATFGFGILVQQLLYHEPYMFTSLSQGRTMPRP------- 450

Query: 164 RSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSL 223
                       F   +   YYV+L +  + A +++ ++R  +    + + D+  A  S+
Sbjct: 451 -----------DFAPDDGAFYYVVLAVLVVVAVLLVTIQRGRLGRLLQGMSDSPTAVTSM 499

Query: 224 NTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +   +K+  F VS+   G+AGA   
Sbjct: 500 GLSTTVSKVIVFCVSAFLAGVAGALLG 526


>gi|254464807|ref|ZP_05078218.1| inner-membrane translocator [Rhodobacterales bacterium Y4I]
 gi|206685715|gb|EDZ46197.1| inner-membrane translocator [Rhodobacterales bacterium Y4I]
          Length = 328

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 99/324 (30%), Gaps = 33/324 (10%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR------------ 87
            +  +  ++Y + A G  ++  + G+ +    +     A + V +               
Sbjct: 13  LNGLMAGVLYALVALGFVLIYKASGIFNYAQGVMALFAAMTLVGIMQGQVPFSHVINAVF 72

Query: 88  --------YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
                   + +   L I ++  +      ++ +  +K       I   + +      L  
Sbjct: 73  GGHVTHFGWNVPGVLAIALTVAVMVLLAWLVQVLVMKHLVGQEPIILFMATIGLAYFLEG 132

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +  G     +   L            F  F   F I  + +   ++    + A ++ 
Sbjct: 133 VADLMWGSEIKTLDVGLPQGINLWIDETTFNLFGYGFFIDNLDVVATVIAALLV-AGLVA 191

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           + + T    A R + D+ +A  S+  ++ F  +  ++V+     +AG  +          
Sbjct: 192 FSQYTKQGRAMRAVADDHQAALSVGISLNFIWVLVWSVAGFVALVAGIVWGTKSGVQFSL 251

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                  +  + +++LGG TS+        I+    +L             +   +    
Sbjct: 252 S---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFAIGPMVGGATENWFA---- 304

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
                 +   L ++ R   L   +
Sbjct: 305 -----YVLALLFLVFRPQGLFGEK 323


>gi|86136692|ref|ZP_01055271.1| ABC transporter, permease protein [Roseobacter sp. MED193]
 gi|85827566|gb|EAQ47762.1| ABC transporter, permease protein [Roseobacter sp. MED193]
          Length = 350

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 96/322 (29%), Gaps = 21/322 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R       + ++ V     +F F     S     +         + A  ++ ++   G 
Sbjct: 27  IRSPAMGAFVGMVIVFAIFAMFGFSRNFLSIAGFANWMNFASTVGIIAIPVAFLM-IAGE 85

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           L ++        A    I  + Y   +WL I ++  ++ + G++ GL   + +     + 
Sbjct: 86  LDISTGAVLPASAMMLGISVNHYDFPMWLGIIMTLTMAASVGLVNGLLVTRTQVPSFIVT 145

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                                  G+ +A   + +  T  SL       + F         
Sbjct: 146 ---------------LATLFAVGGLTLALSDFLINNTNVSLQSPDWAKALFGTRYFGFRS 190

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            +     L      +L ++   N    +  + ++  +    +   K+  F + S    +A
Sbjct: 191 AVYWWIGLIVIFWFFLHKSPWGNWVFAVGGDSESARNAGIPVNKLKIWLFVLCSVCTALA 250

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCG 300
           G       +      F       +I+ V+      GG  S++ +   T  L  V +    
Sbjct: 251 GMCQVIQFNSAQSATFFNMIFFTIIASVVGGVLLNGGFGSVAGVVFGTMTLGIVQQGINY 310

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
            +     SLL       +    
Sbjct: 311 TDIDRNLSLLIIGVMLLIAVLM 332


>gi|119386976|ref|YP_918031.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119377571|gb|ABL72335.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 314

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 99/304 (32%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++Y + A GLS++ G L  ++      Y +GAY    L  R   S W  +P+
Sbjct: 37  VLNGIGLGMLYFLLAVGLSVIFGLLQFVNFAHGAFYLLGAYLTYDLTMRG-FSFWAAMPL 95

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I      ++    L           ++++     ++ +   I  G  G  V      
Sbjct: 96  ATLIVAGIAALIEALLLHRIYKLPHTFHILVTVGLALVVQELVIIAWGPLGGSVPAPEGL 155

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  +              IY  +  + +     L+  +   L  T +    R   +   
Sbjct: 156 QGVVI----------LGDFIYPQYRLFTIGFTAVLAGLLWWLLEGTRLGAIVRGGSELPS 205

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L    +    + F   +   G+AGA  A  R              +   +V++GGM
Sbjct: 206 NMALLGYNTLRINTAVFGFGAGLAGLAGALAAPIRGV--EPFMGIEALSVAFVVVVIGGM 263

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +    A  ++  V  +   +              +      ++ + + LVI +    
Sbjct: 264 GSYTGALVAGLLVGVVQSVMTTL--------------WPEGARLMIYVGMALVIALMPRG 309

Query: 339 LLRL 342
           LL  
Sbjct: 310 LLGR 313


>gi|312621252|ref|YP_004022865.1| inner-membrane translocator [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312201719|gb|ADQ45046.1| inner-membrane translocator [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 373

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/359 (10%), Positives = 92/359 (25%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  + +++ +   L  G   + + +  +  Q+ I  + A G+  V+   G + L+
Sbjct: 8   RTYTLIIAILLIWTIFTVLTDGNFLTPRNLSMLARQMAITALVAIGMVFVI-VAGHIDLS 66

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                        +L    G S    +    ++    G+  G            +    M
Sbjct: 67  VGSVVGFTGAIAGVLQVWNGWSTPATVIAVLIVGIIIGIWQGYWVAYRGVPAFIVTLAGM 126

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF------- 182
                 +L+  K IT                    S+         +++  I        
Sbjct: 127 LVFRGGVLLASKGITISPFKDSFRFIGQGYLNKALSIAFGAVLIVGYLLLTISQRNRRKK 186

Query: 183 ----------------------------------MYYVLLGMCFLSASIILWLRRTAISN 208
                                             +   +L +   +  +    + T    
Sbjct: 187 YNLEVLPMGLEIAKATVVIALIVAFTGVMISYEGISIPVLILVVFTILLTFVSQNTTFGK 246

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N++A       I    +  F +      +AG    +  D  +       E   
Sbjct: 247 YVYAIGGNKEAASLSGINIRNVTMKIFILMGFLSALAGIVLTSRLDAATSGAGTNMELDA 306

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + ++     LGG  ++        I+  +      +N  Y   L+            
Sbjct: 307 IAAAILGGTSTLGGEGTVPGAIIGALIMASIDNGMSLLNLEYSYQLIVKGLVLVFAVWL 365


>gi|301017841|ref|ZP_07182484.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 196-1]
 gi|299882633|gb|EFI90844.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 196-1]
          Length = 393

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/355 (13%), Positives = 100/355 (28%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             +      I     G  + L I V+ ++    G   G      +     +    M    
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 134 QNILI-----------------------KWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
             ++                               G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYPPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|323189389|gb|EFZ74671.1| branched-chain amino acid transport system / permease component
           family protein [Escherichia coli RN587/1]
          Length = 393

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASIGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTFLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|291575292|gb|ADE10217.1| ABC transporter permease [Actinoplanes liguriensis]
          Length = 319

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/321 (13%), Positives = 92/321 (28%), Gaps = 29/321 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    V+  ++   F     +   +    IQ    V+ A G+++V+G+ G + L+     
Sbjct: 23  VYAAIVLLIVVNIAFTPYFLTLSNLRIQLIQAAPVVIVALGMALVIGTEG-IDLSVGSVM 81

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +       +  L+  ++ +  G                 L    L+     Q
Sbjct: 82  ALAAAFIPLYLGYGVTAAILVSLLAGVAVG-----------------LINGVLVAKAGLQ 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+        G+    V             L+             + +  ++     L 
Sbjct: 125 PIVATLALFVGGRGLAVVISGGQLKDVRNADLLYL------GSGDLLGVPVLVWIAALLV 178

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   +RRT        +  N+ A       +    +  +   +    +AG    A   
Sbjct: 179 LVVAFVVRRTVFGRRLLAVGGNRPAAELAGLPVKRVLIGVYVFCAVLASIAGLLSVARIQ 238

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                       +  I+ V++GG            + +        +      +++K D 
Sbjct: 239 SSDASAVGLLIELSAITAVVVGGT-----PLTGGRVRVLGTVAGALLMQLVVATMIKHDL 293

Query: 315 SFNMRHTTLMVIALFLVILMR 335
             +       VI L  V + R
Sbjct: 294 PPSTTEMVQAVIILVAVYVAR 314


>gi|297162865|gb|ADI12577.1| inner-membrane translocator [Streptomyces bingchenggensis BCW-1]
          Length = 409

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/357 (12%), Positives = 96/357 (26%), Gaps = 46/357 (12%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    VV   +  +      S   + ++   ++   + A G+  V+  +G + L+     
Sbjct: 39  VIAGIVVIWTIFQVLNPTFLSSTNLVNLSFDMVPIGVIALGIVCVL-LVGQIDLSVGSVS 97

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL------------ 122
            +      ++  R+    WL +  +   S   G + G    +                  
Sbjct: 98  GLSGAITAVVMVRFEQPTWLAVLAALAASCLIGWLYGQGFNRIGVPSFVVTLAGLLAFLG 157

Query: 123 ----------------------AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
                                       + +     L     +    AG   A      G
Sbjct: 158 VQLLVLQGENAINLPFDSTLVKFAQLWFVPDWLAYTLAVAAGMGFSAAGWVRARTRRRAG 217

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMY----------YVLLGMCFLSASIILWLRRTAISNAW 210
            + +S           +   +FM           ++ +    L  ++   L RT    + 
Sbjct: 218 LSAQSPQWLVAKSVLLLAALLFMVSYLCRTRGVAWMFVLFVALVLALNYVLTRTKYGRSV 277

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N +A       +     S F + S    + G   A+     +        N+  I
Sbjct: 278 YAVGGNAEAARRAGINVRRVYTSVFVICSGLAALGGVLAASRLAAANQSAGGGDVNLNAI 337

Query: 271 SIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  ++GG TSL     +    +    +   ++       L     F +    L +  
Sbjct: 338 AAAVIGG-TSLFGGRGSAFAALLGTLVIQSISSGLTLLNLDSSYRFVITGLVLFIAV 393


>gi|317054149|ref|YP_004118174.1| inner-membrane translocator [Pantoea sp. At-9b]
 gi|316952144|gb|ADU71618.1| inner-membrane translocator [Pantoea sp. At-9b]
          Length = 289

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/289 (16%), Positives = 96/289 (33%), Gaps = 15/289 (5%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
           Y   +   I + ++ + GL++V G + ++++       +G YS ++  +  G+ IW+ + 
Sbjct: 7   YGIEVLNAIAVLIIMSLGLAVVFGMMKIVNMAHGEFMMLGGYSAILATNHLGVPIWIAML 66

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           V A +      I+    +        I T++ +      LI    +  G           
Sbjct: 67  VIAPLVVGVFGIVIERVIIRHLYGRMIDTMLATWGLSLALIGAATMLFG----------- 115

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
              TT+                  +  + +L    L  ++ L LR T +    R    N 
Sbjct: 116 --NTTLGISSPLPSVSVGSYSTSGYSLFTILFALCLVGALWLLLRYTTLGLCARATMQNA 173

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +   +L T         F + +A  G+ GA  A     I       S        VI GG
Sbjct: 174 RMAAALGTNPGKIYSLTFGLGAALSGLGGALLAPITGVI--PTIGISFIAKAFITVIGGG 231

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
              ++    ++ +   + +L        F ++     +  +       I
Sbjct: 232 SAIIAGTLSSSTLFGTISQLATYAWTPVFGAVALLLSAIVLLRLLPQGI 280


>gi|254445732|ref|ZP_05059208.1| amino acid or sugar ABC transport system, permease protein,
           putative [Verrucomicrobiae bacterium DG1235]
 gi|198260040|gb|EDY84348.1| amino acid or sugar ABC transport system, permease protein,
           putative [Verrucomicrobiae bacterium DG1235]
          Length = 333

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 57/344 (16%), Positives = 106/344 (30%), Gaps = 33/344 (9%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQ-------KYIDSMGIQILIYVMFA 53
           MS  + R N        LA+V    LF                  +  +  Q    ++ +
Sbjct: 1   MSKRNWRENPLIWPTAGLALVVAFNLFFGAEFFSISIQDGHLYGNLVDILSQGARVMLLS 60

Query: 54  WGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLP 113
            G+++V+   G + L+     AI       L  R GL  ++  P +  +S   G+  G  
Sbjct: 61  LGMTLVIA-TGGVDLSVGAVMAIAGALVAALVERAGLGFFVAFPAAMAVSMLLGVFNGSL 119

Query: 114 SLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
            +  R   +    ++M                  AG  VA  +      +          
Sbjct: 120 VVFARIQPIIATLILM-----------------VAGRGVAQLITTSDVIIFEDPVLEFMG 162

Query: 174 SSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLS 233
             +++   F  +++  +      +I   R+TAI      + DN+ A           KL 
Sbjct: 163 QGYLLGIPFSLWLVAAIFVGMVLLI---RKTAIGLLIEAVGDNENASRFSGINASQLKLI 219

Query: 234 AFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIG 293
            + V     G+AG   AAS     P        +  I  V++GG             L+ 
Sbjct: 220 VYGVCGLLAGLAGVLEAASLSAADPIKSGELRELDAIFAVVIGGT-----ALTGGRFLLL 274

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
              L   +      +L        +      ++ + + +L    
Sbjct: 275 GSILGAILLQALTVTLYNVGVPAAVAPVPKAIVIVAVCLLQAPR 318


>gi|33600578|ref|NP_888138.1| ABC transporter [Bordetella bronchiseptica RB50]
 gi|33568177|emb|CAE32090.1| Putative ABC transport system, membrane protein [Bordetella
           bronchiseptica RB50]
          Length = 287

 Score = 51.8 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 92/265 (34%), Gaps = 13/265 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +  ++  M + GLS++ G + ++++     + IGA++     +++  + W  + V
Sbjct: 8   LLNSLVLGVLLFMMSAGLSLIFGLMNVVNIAHGSFFMIGAFT-AYTLAQFSGNFWFALGV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + + A  ++M    ++       +  ++++  F  +         G     VA     
Sbjct: 67  GWIPAVAAAVLMERVFIRPLYKRGHLDQVLLTFGFIFVFGDICKYLWGADIRNVAPP--- 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +       +  I   +  +++     ++A++  +L R+ I    R   D+  
Sbjct: 124 -------EMLEGSLELAGAIVPKYRLFLVCFGGVVAAALWWFLERSRIGAMVRAGVDDAA 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       FA+ +A   + G   +                I    + ++GGM
Sbjct: 177 TAAGIGINVPLLFGCIFALGAALAAIGGIVASPILGV--YLGMDVEILIPAFIVTVVGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNF 303
            SL     A  ++  +         
Sbjct: 235 GSLRGALVAAMLVGAIDTFGKAYFP 259


>gi|307298140|ref|ZP_07577944.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916226|gb|EFN46609.1| inner-membrane translocator [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 307

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 94/316 (29%), Gaps = 28/316 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
               + +  V   L+         +     ++  Q+ I  + A+G++ V+   G + L+ 
Sbjct: 9   RRFPIVVGFVGIVLVFSFLSDRFFTVSNFMNVLRQVSINGIIAFGMTFVI-ISGGIDLSV 67

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
              +A  A     +       + +L  +           + +  +K +   + +AT+ ++
Sbjct: 68  GSIFAFSAVVGASVIKSTSTFLGILAALGIGALMGAFNGVIIAKMKLQPFIVTLATMAIA 127

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             F     + +P+T   A      R    G  V                       +L M
Sbjct: 128 RSFTQAFTQGRPVTGFPASFREIGRGEIFGIPVP----------------------VLIM 165

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +       L  T +     +I  N++A       +   K+  + +S     ++     
Sbjct: 166 LGVFVFAWYLLFNTKLGLYTYSIGGNEEATRLSGVKVDRYKIVIYTISGLLAALSALILT 225

Query: 251 ASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A  +   P   +  E   + ++V     + GG  S+        +L  +      +    
Sbjct: 226 ARLNSAQPIFGEGYELDAIAAVVLGGTSLSGGKGSIIGTIFGVMVLGIINNGMNLVIISP 285

Query: 306 FNSLLKFDCSFNMRHT 321
           F           +   
Sbjct: 286 FYQQAVKGAVILLAVM 301


>gi|227883736|ref|ZP_04001541.1| xylose ABC superfamily ATP binding cassette transporter, membrane
           protein [Escherichia coli 83972]
 gi|227839316|gb|EEJ49782.1| xylose ABC superfamily ATP binding cassette transporter, membrane
           protein [Escherichia coli 83972]
 gi|307555673|gb|ADN48448.1| xylose transport system permease protein XylH [Escherichia coli ABU
           83972]
          Length = 393

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYSGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|268590965|ref|ZP_06125186.1| ribose ABC transporter, permease protein [Providencia rettgeri DSM
           1131]
 gi|291313766|gb|EFE54219.1| ribose ABC transporter, permease protein [Providencia rettgeri DSM
           1131]
          Length = 329

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/321 (12%), Positives = 100/321 (31%), Gaps = 20/321 (6%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            LR    +  L  + ++  +   L      + + +  +     +  +FA GL  VV   G
Sbjct: 6   KLRPQSVEGWLTWVILIMVVFFTLMSPQFLTIQNLLDLSESYAVTGIFALGL-FVVLVTG 64

Query: 65  LLSLNCVIAYAIGAYSYVILGSR-YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
            + ++     ++  Y       + +  S  + I ++ +I  A G+I  +         + 
Sbjct: 65  GIDISFAAVASVVQYVIATWLLQGFIASPAVSITLAIIIGIAFGLINAILIYSLNVVSII 124

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           I   + S +F  ++      +      +  D +  L   V         P   ++   F+
Sbjct: 125 ITISMQSLLFGMLMWLTNGHSIYDLPDWWVDPVTILPFEVDGEYYQVGLPLIVMLGIAFL 184

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
            ++L+              +T I      +  +Q++   +   +    L A+    A   
Sbjct: 185 TWILM-------------NKTHIGRQLYAVGGSQESASRIGIRVSVIYLFAYGYLGAMAA 231

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELC 298
           + G         + P      E  ++ + V     + GG  S+        ++  +    
Sbjct: 232 IGGMLQTYRMSEVVPSALVGGELDVLAAAVLGGASLSGGRGSVIGTLMGVFLIGILKNGL 291

Query: 299 CGMNFYYFNSLLKFDCSFNMR 319
             +    +   +       + 
Sbjct: 292 NLIGVSNYFVNIVIGLVILIA 312


>gi|239625988|ref|ZP_04669019.1| sugar ABC transporter ATP-binding protein [Clostridiales bacterium
           1_7_47_FAA]
 gi|239520218|gb|EEQ60084.1| sugar ABC transporter ATP-binding protein [Clostridiales bacterium
           1_7_47FAA]
          Length = 316

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/314 (11%), Positives = 92/314 (29%), Gaps = 27/314 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +  I+ +  +   + + +F     +     ++       +M A G ++++   G + L+ 
Sbjct: 15  HTVIIYIFLLALMVFVSVFSEDFFTLGNFKNLLRSSFPLLMAALGQTLII-LTGGIDLSL 73

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A+     V+      +  ++    +A++ G     +    +        I T+  +
Sbjct: 74  GGIVALCNVVCVLSMDPDTVFGFVPALSAAVVVGLLCGALNGILITKGRLAPIIVTIATT 133

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +F  + +   P   G                        R  + F+   +      +  
Sbjct: 134 AVFDGLALLLMPNPGGS---------------------VHRGFAKFLTRGLSGAIPFILF 172

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
            F+   +      T    A R I  ++ A +S    +   K  A+ ++      AG F +
Sbjct: 173 LFILCLVRSLANSTPFGKALRAIGGSENAAYSTGIRVGKIKFKAYCLAGVLCAAAGIFLS 232

Query: 251 ASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A  +     + K      + + V+      G +           I+  +  +        
Sbjct: 233 AQMNSADATIGKNYAMNAITAAVVGGTAMTGAVGDPLGTIAGVFIISIINNMLNLFGVSS 292

Query: 306 FNSLLKFDCSFNMR 319
           F   +         
Sbjct: 293 FYQFICQGLILIAA 306


>gi|90422200|ref|YP_530570.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gi|90104214|gb|ABD86251.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 290

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 82/307 (26%), Gaps = 27/307 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ S      +Y + A G +++  +  +++        +G    V   +         +
Sbjct: 6   QFLVSGLTVGAVYALVALGFTLIYNASDVVNFAQGEFVMLGGMVTVFASAAGVPLPLAAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               +      ++        RG       +I       +    + +             
Sbjct: 66  IAIGVAVAVGLLLYWCAIAPARGASAVSLIIITIGASILLRGAAQIV------------F 113

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + S              +   ++VL G   +   + L++ RT +  A      N
Sbjct: 114 DKQFHKLPSFSGDAPVGLFGAAVQPQSFWVLGGTAVIVLLLYLFMERTLLGKAVVATAAN 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +          AF  S+A   +AG         ++         +   +  +LG
Sbjct: 174 RLAAKLVGINTSTVMALAFGGSAAIGAIAGILITP--ITLTSYDVGTLLALKGFAAAMLG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM +         +L  +     G     +     F             + +  V+    
Sbjct: 232 GMGNPLGAVAGGLLLGLLEAFGAGYLSSTYKDAFAF-------------LVILGVLFAAP 278

Query: 337 HSLLRLR 343
             L   R
Sbjct: 279 QGLFGRR 285


>gi|295680553|ref|YP_003609127.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295440448|gb|ADG19616.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 352

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 79/302 (26%), Gaps = 12/302 (3%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            A  +   + S+   + I  +   G++I +   G   L+     A        +   +  
Sbjct: 51  PAFLNVDNLLSILQAVSIVALLGIGVTITLA-AGGFDLSVGSVAATAQMVASYVLIVWHG 109

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
             W  +          G+  G+   + R     +ATL    +   + +      +   G 
Sbjct: 110 GAWSAVLACLAFGVVAGLFNGVLITRLR-VPDQLATLGTLFLLAGLQLIPTGGRSLATGT 168

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
            + D     G+     +   R     ++    +    L            +  T      
Sbjct: 169 VLPDGTEATGSFPDLFLALGRSRLLDIVPLPVLLLAALTAVACFV-----MEATRWGRVI 223

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR----DRISPDMFKFSEN 266
             I  N+ A           +++A+  SS    + G   AA            +   +  
Sbjct: 224 YAIGGNETAARLAGAPTARYRIAAYVASSTIAALGGVLIAARVGRGDVSAGHSLLLDAVA 283

Query: 267 IIVISIVILGGMT-SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
             ++   + G    ++         +  ++     +N  Y+                   
Sbjct: 284 AALVGYAVWGAKRPNVPGTVVGAVFVGVLLNGLTMLNAPYYMQDFIKGVLLVFALAFTFS 343

Query: 326 IA 327
           + 
Sbjct: 344 VG 345


>gi|281413104|ref|YP_003347183.1| inner-membrane translocator [Thermotoga naphthophila RKU-10]
 gi|281374207|gb|ADA67769.1| inner-membrane translocator [Thermotoga naphthophila RKU-10]
          Length = 317

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/319 (10%), Positives = 87/319 (27%), Gaps = 26/319 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K    L +  ++   +L +      + K +       +   + +  +++++   G + L+
Sbjct: 2   KKTLPLFIFLMIEFFVLSILSKEFLTIKNLLETLRYAVELGIMSIPMTMIIA-TGGIDLS 60

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+      I+           +    + SG  G+   + +         I  +++
Sbjct: 61  VASLLALTGILMGIIWKHTSNIWIGSLVSILISSGLGGLNGWMITKM------KIPPIVV 114

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +               G  GI      +                         + Y    
Sbjct: 115 TIATMAAYRGLANGLGGGRGITNFPEKFQ--------------TFGQGSLFNLIPYSAFV 160

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           M  +     + + R+ +     +I  N+   +     +   KL  +  S    G+AG  +
Sbjct: 161 MVLVVVFGYIIMERSKLGRYITSIGYNETGAYYSGVKVNRIKLMLYIFSGMMAGLAGIIY 220

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            A       + F   E  +V ++V     + GG  ++        I+  +          
Sbjct: 221 TARLGAAKANAFTGGELEVVTAVVLGGTSVTGGENNIVGTIIGVLIITFLKNGLNLARVP 280

Query: 305 YFNSLLKFDCSFNMRHTTL 323
           +    +             
Sbjct: 281 HSVQTMLIGIILISAIVVY 299


>gi|217973324|ref|YP_002358075.1| Monosaccharide-transporting ATPase [Shewanella baltica OS223]
 gi|217498459|gb|ACK46652.1| Monosaccharide-transporting ATPase [Shewanella baltica OS223]
          Length = 372

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 50/309 (16%), Positives = 97/309 (31%), Gaps = 24/309 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +  +  +     + A G+S+V+   G + L+     AI       L     +S+  ++  
Sbjct: 77  LIDILNRSAPVALLAIGMSLVIA-TGGIDLSVGAVMAIAGAVCANLLLVPDISLVTVVFA 135

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             M+  A G I G          +    L+M                  AG  VA  +  
Sbjct: 136 GLMVGLAAGCINGALVSFLGIQPIVATLLLM-----------------VAGRGVAQLINQ 178

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                     F        +      ++++GM  L+  ++      A+      +  N K
Sbjct: 179 GQIITFQNEAFAAIGVGQFLGLPMPIWIVIGMLLLTQLLLRRT---ALGLFIEAVGCNAK 235

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   L       KL  +A++     +AG    A       +       +  I  V++GG 
Sbjct: 236 ASRYLGINDKSIKLFVYAIAGLCAALAGMISTADIQGSDANNAGLWLELDAILAVVIGGA 295

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH- 337
             L+    +  + I    +   +      S L    +  ++   ++ + L      R   
Sbjct: 296 A-LTGGRFSLVLSIIGALIIQTLATTIIVSGLPAKFNLLIKAIVILSVLLLQSEKFRRQL 354

Query: 338 -SLLRLRTP 345
             L +LRT 
Sbjct: 355 SGLFKLRTF 363


>gi|33596806|ref|NP_884449.1| ABC transporter [Bordetella parapertussis 12822]
 gi|33573507|emb|CAE37496.1| Putative ABC transport system, membrane protein [Bordetella
           parapertussis]
          Length = 287

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 91/265 (34%), Gaps = 13/265 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +  ++  M + GLS++ G + ++++     + IGA++     +++  + W  + V
Sbjct: 8   LLNSLVLGVLLFMMSAGLSLIFGLMNVVNIAHGSFFMIGAFT-AYTLAQFSGNFWFALGV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             + + A  ++M    ++       +  ++++  F  +         G     VA     
Sbjct: 67  GWIPAVAAAVLMERVFIRPLYKRGHLDQVLLTFGFIFVFGDICKYLWGADIRNVAPP--- 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +       +  I   +  +++     ++ ++  +L R+ I    R   D+  
Sbjct: 124 -------EMLEGSLELAGAIVPKYRLFLVCFGGVVAVALWWFLERSRIGAMVRAGVDDAA 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       FA+ +A   + G   +                I    + ++GGM
Sbjct: 177 TAAGIGINVPLLFGCIFALGAALAAIGGIVASPILGV--YLGMDVEILIPAFIVTVVGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNF 303
            SL     A  ++  +         
Sbjct: 235 GSLRGALVAAMLVGAIDTFGKAYFP 259


>gi|114565980|ref|YP_753134.1| sugar ABC transporter permease [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114336915|gb|ABI67763.1| putative sugar ABC transporter, permease protein [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 317

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 94/322 (29%), Gaps = 22/322 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            +K D  L    V+  L +         QK + ++     +Y + A G+++++   G + 
Sbjct: 8   FSKRDLYLIFTIVILGLFISYNAPEFMQQKNLSNILGNNSVYGIMAIGMTLIL-VTGNID 66

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++    +AI         +   ++          +S   G ++G  +          A +
Sbjct: 67  ISVGAVFAITGIIAANFANYADIAGITTPLPVFAVSMLAGAVLGFINGYLVAKIKLPAII 126

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I       +      +T G     +   L  L                     + +Y   
Sbjct: 127 ITLGNMSIMRGLLLLLTGGAWVSSMPGWLTTLAR----------------SKYLGLYAST 170

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
               F +  I + L+ T +      +  N  A   +   +    +  F+V  A  G+A  
Sbjct: 171 YLWLFTALLIFILLKCTVLGRNILAVGGNPTAAQRIGINLKKVYVFIFSVFGALTGLAST 230

Query: 248 FFAASRDRISPDMFKFSENIIVIS-----IVILGGMTSLSKIAKATAILIGVVELCCGMN 302
            + A+     P      E  ++ +       I GG  S+        +L  +       +
Sbjct: 231 IYIANLGCAQPVAGMGYELTLIAASIIGGASIFGGKASILGTCLGVILLGIIANAMVLAH 290

Query: 303 FYYFNSLLKFDCSFNMRHTTLM 324
              +   L       +      
Sbjct: 291 IPIYWQSLVTGLVIILAILFSY 312


>gi|260432028|ref|ZP_05785999.1| branched-chain amino acid ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415856|gb|EEX09115.1| branched-chain amino acid ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
          Length = 328

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/325 (11%), Positives = 100/325 (30%), Gaps = 33/325 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS------------------ 80
             +  +  ++Y + A G  ++  + G+ +    +     A +                  
Sbjct: 12  FLNGLMAGVLYALVALGFVLIYKASGIFNYAQGVMALFAAMTLVGIMNGQVPFAHLINAT 71

Query: 81  --YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               +    + +  +L I ++  +       +    ++       I   + +      L 
Sbjct: 72  FGTHVYTFGWTVPAFLAIILTMGVMVLLAWAVQRFVMRHLVGQEPIILFMATIGLAYFLE 131

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +  G     +   L     T    + F  F   F I  + ++  +     L A+++
Sbjct: 132 GVADLMWGSEIKTLDVGLPQGINTWLDEVTFEIFGYGFFIDNLDIFASI-IAALLVAALV 190

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
            + + T    A R + D+ +A  S+  ++ F  +  ++V+     +AG  +         
Sbjct: 191 AFSQYTKQGRAMRAVADDHQAALSVGISLNFIWIMVWSVAGFVALVAGIVWGTKSGVQFS 250

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                   +  + +++LGG TS+        I+    +L             +   +   
Sbjct: 251 LS---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFAVGPLVGGATENWFA--- 304

Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343
                  +   + ++ R   L   +
Sbjct: 305 ------YVLALIFLVFRPQGLFGEK 323


>gi|91975619|ref|YP_568278.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gi|91682075|gb|ABE38377.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 287

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 96/293 (32%), Gaps = 26/293 (8%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
             Y + A G+ +V G  G+++       ++  +  + L S + L  ++ + ++  +  A 
Sbjct: 16  STYGLLALGMGLVYGVSGIVNFAHGDFISLAMFISLALFSAFALDPYVSVLITIPVMAAL 75

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G ++    L+    +  +  + ++     +L     +  G                  S+
Sbjct: 76  GALVYRFLLRPMAGHQFLMIVQLTLGLSLLLQNGIMMVFGGQ-----------PARTPSI 124

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
           +         V+  +      +    ++  + + LR T    + R +  N +A   +   
Sbjct: 125 VESKLIILGDVVLRMPHVIAFVVAFAMAIGLYVMLRSTDFGRSIRAVHQNARAAALMGVD 184

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +   ++  FA+    + +A A                   +I + +V+LGGMT+   I  
Sbjct: 185 VGRVQVVTFAIGLGILAVAAALLLPGTPI--QPTQGLQYTVITLLVVVLGGMTNFVSIMI 242

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           +  ++                 L+                   L++L R   L
Sbjct: 243 SGLVIGIAEAFGTVYVSDTLGRLVP-------------YAIFVLIMLFRPQGL 282


>gi|269118914|ref|YP_003307091.1| inner-membrane translocator [Sebaldella termitidis ATCC 33386]
 gi|268612792|gb|ACZ07160.1| inner-membrane translocator [Sebaldella termitidis ATCC 33386]
          Length = 323

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 93/310 (30%), Gaps = 26/310 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  V+  ++  L      S   I  +  Q  I  +   G+++ +   G + L+    +
Sbjct: 12  IVVALVMMIIVFSLIDPIYLSSSNIVDIVKQSTINGLLGIGITLAI-ITGGIDLSIGSTF 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AI   S   L        +L   +  ++  + G++ G+   K +                
Sbjct: 71  AIVIVSVGKLLVSGVN-PFLAFAIGIILGFSLGIVNGILVAKVKLQPFIATL-------- 121

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                      G   IY        G      I      +        +   ++ +  + 
Sbjct: 122 -----------GTMSIYRGVAYIITGGWPVLDIPENFRKALDGDIFGVIPSSVVLLFVVG 170

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I + L+ T   N    +  N++A       + F K+ A+A+      +AG    A   
Sbjct: 171 IIIWIILKYTRFGNYIYALGSNEEATKLSGVNVDFNKMMAYAICGVGAALAGMVLLARLG 230

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P   +  E   + +  +     +GG  ++      T +L  +      +    F   
Sbjct: 231 TGEPTAGQGYELNAIAAAAVGGTSLMGGKGTMLGTILGTILLSALRVGLIVVGVDSFWQY 290

Query: 310 LKFDCSFNMR 319
           +       + 
Sbjct: 291 IATGIIIVIA 300


>gi|116254575|ref|YP_770411.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259223|emb|CAK10352.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 319

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/329 (14%), Positives = 111/329 (33%), Gaps = 31/329 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              +AV   L+L +   A  +  ++ S+G   L   +   GL +++   GL+S    + Y
Sbjct: 8   FVPVAVGAALILIVAAWALPTWNFVISIG---LAKGLAVLGLVLMM-RAGLVSFGQGLYY 63

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AIG Y   ++ + + ++  +L+ ++ +I  A    +    L    D       +   +  
Sbjct: 64  AIGGYCVGLMVNLWKINEAVLLLIAPVIIAAATAAVAGLLLSRYRDIFFAMLTLALSMLL 123

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+       G  G  +     F      +                    +L+ +CF +
Sbjct: 124 YGLLVKSVELGGTDGFNIRGVTLFGLPLSGTARFNG-------------LVILVLICFTA 170

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +    +TA+      I+DN+     L  +       ++ +++    + G+       
Sbjct: 171 VITVWCFGKTALGRLLPGIKDNEIRVEYLGASASKTIYLSYILAAILAAVGGSMSGILVA 230

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
            + P+M  ++ +   + I +L G  ++     A   L  V                    
Sbjct: 231 HVDPEMAFWATSGEFVVIAVLAGTGNIFTPFIAALALEFVRTFA--------------YQ 276

Query: 315 SFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                   ++ + +  +IL     L  +R
Sbjct: 277 HAPNTWQLVLGVIILSMILFLPTGLGGVR 305


>gi|91782161|ref|YP_557367.1| ABC sugar transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|296162023|ref|ZP_06844822.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|91686115|gb|ABE29315.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia xenovorans LB400]
 gi|295887767|gb|EFG67586.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 337

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/288 (11%), Positives = 85/288 (29%), Gaps = 12/288 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   ++  L      +   + ++  +     + A G++ V+   G + L+     A
Sbjct: 27  LVGLIALCIVGTLLNRDFATVDNMMNVLTRTSFIGIIAVGMTFVI-ISGGIDLSVGSMAA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +               +   I            +  + +L   G +     L++++    
Sbjct: 86  L----IAGSMIWLMNGLAAGIGGHTFAPLLILTLGIVFALVLGGLFGCAHGLLITKGRIE 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             I           +          T   SL   +       ++ + +   +  +     
Sbjct: 142 PFIVTLGTLGIFRAVLTWLADGGALTLDNSLSDLYGPVYYASLFGVPVPIWVFLVVAAGG 201

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           ++IL   RTA     + I  N++        +   K+  + +    +G+A   +      
Sbjct: 202 ALILN--RTAFGRHVQAIGSNEQVARYAAIRVDTVKIVTYVLLGICVGVATVLYVPRLGS 259

Query: 256 ISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELC 298
            +P      E   + S+V+      GG   +        +L  +  + 
Sbjct: 260 ATPTTGLLWELEAIASVVVGGTALKGGEGRVIGTVIGAILLSVIANIL 307


>gi|284162419|ref|YP_003401042.1| inner-membrane translocator [Archaeoglobus profundus DSM 5631]
 gi|284012416|gb|ADB58369.1| inner-membrane translocator [Archaeoglobus profundus DSM 5631]
          Length = 343

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 57/341 (16%), Positives = 109/341 (31%), Gaps = 53/341 (15%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLN----------------------------- 69
           + ++     +Y + A  L++  G  G+ +                               
Sbjct: 6   VTTVLFWFGLYAIVAISLNLEYGYAGIPNFGRCLAVVVGAVAVGGVVVRLLMFMFNVNGQ 65

Query: 70  ----CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
                  A +I               + L + ++ +I    G I  LPS K   DYLAI 
Sbjct: 66  FLVASGQASSIANDIIAHNPLFGIGLLILSLVIACLIGMLVGAIFILPSAKLSEDYLAIT 125

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            L +SE+   IL     I  G  G+ + D                         ++    
Sbjct: 126 LLAISEVVLQILYYSTDIAGGYYGVSIPD----------------VLNFVPSGRDVVFIG 169

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++L + FL       L  T      R +R+N+    +    I+  ++   A+ S    +A
Sbjct: 170 IILVVAFLVFVFAEKLLNTPYGRILRAMRENENVVKAFGRDIMVLRVKIVAIGSGIAALA 229

Query: 246 GAFFAASRDRIS---PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           GA +A     ++       +F    +   ++ILGG+++   +     +      L     
Sbjct: 230 GALYALYTANVAGILNLYSRFYWTFLPFLMIILGGLSNNRGVLAGAFVFATTKVLLETY- 288

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
            +   +LL    S       L      L++  R   L++ +
Sbjct: 289 KFEIKTLLHIPFSSTWLGYMLFGAVTLLILYYRPEGLIKEK 329


>gi|19552474|ref|NP_600476.1| ABC-type transporter, permease component [Corynebacterium
           glutamicum ATCC 13032]
          Length = 304

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 94/311 (30%), Gaps = 30/311 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  +   + LF+      +   + ++GIQ     + A+G++ V+ + G + L+     
Sbjct: 6   ALVGLIALCVGLFIATPHFLTIPNLINIGIQSATVAILAFGMTFVIVTAG-IDLSVGSVA 64

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+GA +     +  GL  W+ + +   I    G I G+     +                
Sbjct: 65  ALGAMTSAYFFAEVGLPGWITLLIGLFIGLLAGAISGISIAYGKLPAFI----------- 113

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  S I      ++       +   +L M    
Sbjct: 114 -----------ATLAMMSIARGITLVISQGSPIPSAPAVNALGRTYFGIPMPILMMALAG 162

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N +A       +    +  +A++  +  +AG        
Sbjct: 163 IVCWFILSRTVLGRSMYAIGGNMEAARLSGLPVKKILVMVYALAGVYAALAGLVMTGRLS 222

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              P        +  I+ V++GG          +       +L  +      +N   F  
Sbjct: 223 SAQPQA-GVGYELDAIAAVVIGGASLAGGTGKATGTLIGAILLAVIRNGLNILNVSSFWQ 281

Query: 309 LLKFDCSFNMR 319
            +   C   + 
Sbjct: 282 QIVIGCVIALA 292


>gi|167038422|ref|YP_001666000.1| monosaccharide-transporting ATPase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167038835|ref|YP_001661820.1| monosaccharide-transporting ATPase [Thermoanaerobacter sp. X514]
 gi|300913580|ref|ZP_07130897.1| inner-membrane translocator [Thermoanaerobacter sp. X561]
 gi|307723405|ref|YP_003903156.1| inner-membrane translocator [Thermoanaerobacter sp. X513]
 gi|320116820|ref|YP_004186979.1| inner-membrane translocator [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|166853075|gb|ABY91484.1| Monosaccharide-transporting ATPase [Thermoanaerobacter sp. X514]
 gi|166857256|gb|ABY95664.1| Monosaccharide-transporting ATPase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|300890265|gb|EFK85410.1| inner-membrane translocator [Thermoanaerobacter sp. X561]
 gi|307580466|gb|ADN53865.1| inner-membrane translocator [Thermoanaerobacter sp. X513]
 gi|319929911|gb|ADV80596.1| inner-membrane translocator [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 318

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 84/312 (26%), Gaps = 27/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V   ++  +          + ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 23  LIGLVGLIVVFSILSPRFLDYYNLTNVLRQTSLNAIMAVGMTFVI-LTGGIDLSVGSILA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             +     +       I  ++    + +G       +        ++A   ++       
Sbjct: 82  FSSAITAGMLKDGSPLIIAVLAGLIIGTGLGFFNGFVIIRWNIPPFIATFAMMTVARGLT 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           ++        G                         F      Y   +   ++    + A
Sbjct: 142 LVYTNGQPITG---------------------LGAAFGYIGNGYIGPIPVPIILTVLIFA 180

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L+   +         N +A            L  +++S     ++G    +  + 
Sbjct: 181 IGYYILKNNRLGRYVYATGGNIQAAKLAGINTNNIILFVYSLSGFLAAISGLIITSRLNS 240

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            +P   + +E   + ++V     + GG   +        I+  +      +N   F  L+
Sbjct: 241 AAPTAGQGAELDAIAAVVLGGTSLSGGEGGVIGTLIGALIIGILNNGLNLLNVSPFYQLI 300

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 301 AKGAVILLAIAL 312


>gi|296328380|ref|ZP_06870906.1| galactoside ABC superfamily ATP binding cassette transporter,
           membrane protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296154454|gb|EFG95246.1| galactoside ABC superfamily ATP binding cassette transporter,
           membrane protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 339

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/310 (10%), Positives = 85/310 (27%), Gaps = 8/310 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+     + + +      S +   ++  Q  +  + A G++ ++ + G   L+     
Sbjct: 21  LYLVLFCMLIAIIIKEPTFLSLRNFKNILTQSSVRTIIALGVAGLIVTQG-TDLSAGRQV 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     L             +         +I+ +  +        +   +    F 
Sbjct: 80  GLSAVISGTLLQSMTNVNKAFPKLGEFSIFTTILIVVVVGVVIASINGVVVATLNVHPFI 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +     +    +  Y       +   V    +F +       Y I    +   +    
Sbjct: 140 ATMGTMTIVYGINSLYYDKAGAAPISGFVEKYSKFAQGYIKIGSYTIPYLIIYAAIAT-- 197

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +     +T        +  N +A       ++   +  +A+S A+    G   A    
Sbjct: 198 LIMWTLWNKTKFGKNVFAVGGNPEAAKVSGVNVVLTLMGIYALSGAYYAFGGFLEAGRIG 257

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + + VI      GG+  +S +     IL  +           +   
Sbjct: 258 SATNNLGFMYEMDAIAACVIGGVSFYGGVGRISGVITGVIILTIINYGLTYTGVSPYWQY 317

Query: 310 LKFDCSFNMR 319
           +         
Sbjct: 318 IIKGIIIVTA 327


>gi|288922313|ref|ZP_06416507.1| inner-membrane translocator [Frankia sp. EUN1f]
 gi|288346338|gb|EFC80673.1| inner-membrane translocator [Frankia sp. EUN1f]
          Length = 377

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/321 (10%), Positives = 86/321 (26%), Gaps = 25/321 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           RL  +D  +  LA +  +L  +F+    S +    + + +L  V+ A  ++ V+   G +
Sbjct: 45  RLAGWDVAVIALAALVIVLASVFVDNFGSSRNFTFLVLDLLPIVLIALPMTFVIA-TGEI 103

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+      + +     L ++      ++     + +                  L + +
Sbjct: 104 DLSVASVLGLSSAVMGYLWNQGMTIETIIPLCVLLGAALG------AVNGLFVTALGLPS 157

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L ++     +      +  G   +              S   +                +
Sbjct: 158 LAVTIGTLALYRGLAFVVLGDTAVADFP---------SSYTSWVTGTIGGTSIPNVAIII 208

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +         +      T I          ++A       I   K   +  + A  G+ G
Sbjct: 209 VALAVVFGVLLHA----TPIGRWTFAAGAGEQAARFAGVRIPMLKFWLYVATGAVAGLTG 264

Query: 247 AFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
             +         D     E  +V +++     I GG  +L  +     +L  +       
Sbjct: 265 VLWTLRYSSARADNGSGLELAVVAAVLLGGVSIFGGRGTLPGVLGGVVLLASLQNALRLS 324

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
           +       +            
Sbjct: 325 DVSNEALNIVVGALLVASVLL 345


>gi|227822611|ref|YP_002826583.1| branched-chain amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
 gi|227341612|gb|ACP25830.1| branched-chain amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 288

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 90/303 (29%), Gaps = 23/303 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +       Y + A GL+++   + +L+      Y +G +    +  +  L   + +  
Sbjct: 5   IANGLYLGAQYALIALGLTLIFALMNVLNFAHGQMYVLGGFVTYTIYGQLKLPFVVALIC 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +     G +M     +            M                      V   L+ 
Sbjct: 65  SGVTLAIFGGLMEKFLFRPVVRRSKREESTMLLAAATAFFL----------DAVMLLLFG 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I    F S  VI       V +    + A+ +L+++ +    A R +  ++ 
Sbjct: 115 EKQRGVPKIISGVFVSDRVILPYDRILVGVIAILMIAAFMLFMQYSKPGRAMRALAQDRV 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +    +  FA+ +   G+ G    +     S      S    ++ ++     
Sbjct: 175 AAQLMGVKVERYSMIGFALGAMLAGVVGGLLVSITGVNSGIGGPISIKAFLMVMIGG--- 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                     A ++G       +     +  L     +      ++   L + + +R H 
Sbjct: 232 ----------AGVVGGAIAGGFILGMMESVGLTVLREYGDITYLVIFALLMIFLSIRPHG 281

Query: 339 LLR 341
           L+ 
Sbjct: 282 LMG 284


>gi|217958334|ref|YP_002336882.1| methylthioribose transport system permease protein [Bacillus cereus
           AH187]
 gi|217065322|gb|ACJ79572.1| methylthioribose transport system permease protein [Bacillus cereus
           AH187]
          Length = 329

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/320 (10%), Positives = 88/320 (27%), Gaps = 18/320 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y      + +   +   +   +  +   I  +   I I  + A G++  +   G   L+ 
Sbjct: 18  YQFSTIAIIIGVTIFFSIVNDSFLTYNNISDILRSISIVTLLAIGVTFTLIVDG-FDLSV 76

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               ++   +       Y   + + + V  +     G+   L  ++ +   L        
Sbjct: 77  GSTASLATIAAASCLVLYRQELLVTLLVPILCGVLVGLFNALLVIRIKLPDLLAT----- 131

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                  +    I NG    +      + G +  +      F        + +   ++ M
Sbjct: 132 -------LSIMYIVNGLHLTFSKGSSIYEGMSGATGHFIPSFLFIGQGSVLGIPVPVIIM 184

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +     L+L +T     +     N++A           ++ A+ +S     + G    
Sbjct: 185 LIVVLIAHLFLEKTTYGRFFYMTGGNREAARLAGIPTDRYRVYAYMISGLLASIGGIILC 244

Query: 251 ASRDRISPDMFKFSENIIVISI----VILGGMT-SLSKIAKATAILIGVVELCCGMNFYY 305
           +                 V +      + G    ++      + ++  ++     MN  Y
Sbjct: 245 SRVGTGQVSAGAPLLMDAVAAAYIGYAMFGAKKPNIVGTFLGSVLIGIILNGLTMMNVPY 304

Query: 306 FNSLLKFDCSFNMRHTTLMV 325
           +   +              +
Sbjct: 305 YAQDIIKGSILITALAFSFI 324


>gi|26989179|ref|NP_744604.1| monosaccharide-transporting ATPase [Pseudomonas putida KT2440]
 gi|24984018|gb|AAN68068.1|AE016439_3 ribose ABC transporter, permease protein [Pseudomonas putida
           KT2440]
          Length = 331

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/313 (13%), Positives = 94/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +   +L         S     ++  QI   ++ A G++ V+   G + L+     
Sbjct: 29  LAGALLAMIVLFSFLSSHFWSYGTFSTLANQIPDLMVLAVGMTFVLIIGG-IDLSVGSVL 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +  +    +G  +     +   ++   G I G  ++ +R       +L + E+ +
Sbjct: 88  ALAASTVSVAILGWGWGVLPSALLGMAVAALAGSITGGVTVAWRIPSFI-VSLGVLEMAR 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  ++        G   A     +   V                        +    + 
Sbjct: 147 GLAYQFTDSRTAYIGDAYAWFSNPVAFGVSP--------------------AFIIALLVI 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L RT        I  N++A           K+  FA+     G+A  F  +  +
Sbjct: 187 VLAQLVLTRTVFGRYLIGIGTNEEAVRLAGIDPRPYKVLVFALMGLLAGLAALFQISRLE 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +      +        
Sbjct: 247 AADPNAGSGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGASEPTKR 306

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 307 IITGAVIVIAVVL 319


>gi|323184575|gb|EFZ69949.1| putative ABC transporter permease protein yphD [Escherichia coli
           1357]
          Length = 332

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 88/317 (27%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A                      VS  ++      + L         L      ++ + +
Sbjct: 88  AF---------------------VSVCLAFLLQFEVPLAVACLLVLLLGALMGTLAGVLR 126

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +        +     F+   +   I             + +    L M  L 
Sbjct: 127 GVFNVPSFVATLGLWSALRGMGLFMTNALPVPIDENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVILG-----GMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+ G     G  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSSGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|323525083|ref|YP_004227236.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
 gi|323382085|gb|ADX54176.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
          Length = 337

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/288 (11%), Positives = 86/288 (29%), Gaps = 12/288 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               +   ++  L      +   + ++  +     + A G++ V+   G + L+     A
Sbjct: 27  FAGLIALCVVGTLLNRDFATLDNMMNVLTRTSFIGIIAVGMTFVI-ISGGIDLSVGSMAA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +               +   +        A  ++  + +L   G +     L++++    
Sbjct: 86  L----IAGSMIWLMNGLAAGVGGHTFAPLAIVILGIVFALVLGGLFGCAHGLLITKGRIE 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
             I           +          T   SL   +       ++ + +   +  +     
Sbjct: 142 PFIVTLGTLGIFRAVLTWLADGGALTLDNSLSDLYGPVYYASLFGVPVPIWVFLVTAAGG 201

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           ++IL   RTA     + I  N++        +   K+  + +    +G+A   +      
Sbjct: 202 ALILN--RTAFGRHVQAIGSNEQVARYAAIRVDTVKIITYVLLGICVGVATVLYVPRLGS 259

Query: 256 ISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELC 298
            +P      E   + S+V+      GG   +        +L  +  + 
Sbjct: 260 ATPTTGLLWELEAIASVVVGGTALKGGEGRVIGTVIGAILLSVIANIL 307


>gi|260463871|ref|ZP_05812068.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
 gi|259030468|gb|EEW31747.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
          Length = 328

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/328 (15%), Positives = 95/328 (28%), Gaps = 24/328 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M  F  R +          V+  LL  L+  +  S +Y+           + A G+ +VV
Sbjct: 13  MPKFIRRADPAVLTAFACIVMLLLLGSLYSRSFLSPEYLLQQLKVASFLGVIATGMMLVV 72

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
             LG + L+   + A GA       +   + + L IP         G++ G+     R  
Sbjct: 73  -LLGQIDLSVPWSVAAGAMMACAAAAYGPVGVALAIPFGIFCGVLIGIVNGIGVAYLRIP 131

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
            +                     TN  A   +            +        + F I  
Sbjct: 132 SMI----------------ITLATNAVAQGLMVVYTGGFSPQDSATGAMRYLATGFAIPA 175

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +    ++  +   +   +L   RTA       I + ++A +          + AFAVS  
Sbjct: 176 VPNAVIIWALIGAAMVFVL--TRTAFGRTVYGIGNRERAAYLSGIDTRRVVMIAFAVSGG 233

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVV 295
                G   A    + +  M        + ++V     ILGG  S         ++  + 
Sbjct: 234 LSAFGGVLLAGYASKAAQSMGDAYLLPSIAAVVLGGTSILGGRGSYLGTVAGVILITLLQ 293

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            +   M        + +           
Sbjct: 294 SILSVMQMPEAGRQIIYGVVIVAMLLLY 321


>gi|170288769|ref|YP_001739007.1| monosaccharide-transporting ATPase [Thermotoga sp. RQ2]
 gi|170176272|gb|ACB09324.1| Monosaccharide-transporting ATPase [Thermotoga sp. RQ2]
          Length = 313

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/297 (11%), Positives = 93/297 (31%), Gaps = 26/297 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L+ +   + L +      + + I ++ + +    + ++G+++V+ + G + L+     
Sbjct: 13  IFLILIAIVVFLGVTTREFLTVENIFTVILNVSFIAIMSFGMTMVIITAG-IDLSVGSVL 71

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +    +L +  GLS +  + +  ++    G+  G    K +         ++S    
Sbjct: 72  GVASVVMGLLMNERGLSPFWSVVLGLLVGVGFGLANGFLITKAKLAPFISTLGMLSV--- 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                         G+       +  +                +    +Y  ++G+    
Sbjct: 129 ------------GRGLAYVLSGGWPISPFPESFTIHGQGMVGPVPVPVIYMAVIGVISHI 176

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                  + T        I  N++A   +        +  + ++      AG    A   
Sbjct: 177 FL-----KYTVTGRRIYAIGGNEEASRLVGIKTDRILIMVYTINGFLAAFAGFLLTAWLG 231

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
              P+  +  E  ++ + VI      GG  ++        I+  +      +    F
Sbjct: 232 VAQPNAGQGYELDVIAATVIGGTSLSGGEGTILGAFLGAVIMGVLRNGMILLGVSSF 288


>gi|160937250|ref|ZP_02084612.1| hypothetical protein CLOBOL_02140 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439814|gb|EDP17563.1| hypothetical protein CLOBOL_02140 [Clostridium bolteae ATCC
           BAA-613]
          Length = 338

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 98/314 (31%), Gaps = 16/314 (5%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +  +  +V  +  ++F         + S+          A G++ V+   G + L+    
Sbjct: 25  VAVIALIVLFMFFWIFGDNFAKYSTLVSIFDSSYYIGFMAIGVTFVI-ITGGIDLSIGTV 83

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
               +     L ++ GL + L + ++ ++ G  G+  GL     R               
Sbjct: 84  CICCSLISGTLYTKLGLPMPLCVILAILMGGLFGLANGLMVSVMRLPAF----------I 133

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +         G      A   +   +      R         + +  +    + +  L
Sbjct: 134 ATLGTMMITRGLGSIVTNTATVTFPQASAPGGSFRGIFKLKGAGLPQAGIPTGFILLIIL 193

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  + + L +        ++  N++A       ++  +  A+ +S  F G+AG  +AA  
Sbjct: 194 AILMAILLNKARPGRYILSLGSNKEATRLSGVNVVKWETLAYVISGLFAGLAGVSYAAVY 253

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
             + P      E   +  +VI      GG+ S+S       I+  +      +       
Sbjct: 254 STLMPGTGNGFELDAIAGVVIGGTSLAGGVGSISGTLIGVFIMSVLKTGLPFVGVQPHYQ 313

Query: 309 LLKFDCSFNMRHTT 322
           LL       +    
Sbjct: 314 LLITGFVLIIAVFV 327


>gi|119717542|ref|YP_924507.1| inner-membrane translocator [Nocardioides sp. JS614]
 gi|119538203|gb|ABL82820.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Nocardioides sp. JS614]
          Length = 340

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 91/283 (32%), Gaps = 16/283 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L   A  S     ++    ++ ++FA G+ ++V   G + ++        AY+ V    
Sbjct: 29  ALASPAFFSPSTFFALVRSSMVPLVFALGV-LLVLISGGIDVSFPAIAIFAAYATVKWLL 87

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
             GL    ++     ++    + +    +  R                 + +  + I  G
Sbjct: 88  EAGLDPSPVVVFIIAMTVGGLLGLLNGVVIAR----------FRLPTLIVTLGTQSIFKG 137

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
               Y+             +          V    +++++++ +  ++  I L L+RT  
Sbjct: 138 VLIAYIGSVYIASADLPTPINDLSGAHLVEVSGGGYLHFMIIPVAIVTVLIALMLKRTMF 197

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             +   I  + +A   +   ++  ++  + +  +     G  F       +P      E 
Sbjct: 198 GRSIYAIGGDTEAARRVGIRVVRTQVWLYVLVGSLAAFGGLTFVILGRNANPQSLVGIEL 257

Query: 267 IIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            I+ ++V     I GG  S+        ++  +      +   
Sbjct: 258 DIIAAVVLGGASIFGGRGSVLGTVLGVVLVQLINNNLVLLGIP 300


>gi|295098700|emb|CBK87790.1| xylose ABC transporter membrane protein [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 393

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/355 (12%), Positives = 97/355 (27%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  + V+     ++  G+  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIVIMLFFTWMTDGSYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             +      I     G  + L I V+ ++    G   G      +     +    M    
Sbjct: 91  MGLLGGVAAIFDVWLGWPLPLTIAVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 134 QNIL--------------------IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
             ++                               G+             R   +     
Sbjct: 151 GILIGITNGTTVSPTSASMSQIGQSYLSDGVGFTIGVVGLMAFVAWQWRGRMRRQALGLA 210

Query: 174 SSFVIYEIFMYYVLLGMCFLSASI---------------------ILWLRRTAISNAWRT 212
           S      +    +   +   +  +                     +    RTA       
Sbjct: 211 SPASTSVVGRQALTAVIVLGAIWLLNDYRGVPTPVLLLALLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|311742885|ref|ZP_07716693.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Aeromicrobium marinum DSM 15272]
 gi|311313565|gb|EFQ83474.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Aeromicrobium marinum DSM 15272]
          Length = 381

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 87/295 (29%), Gaps = 41/295 (13%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
             +I +  + A GL++V+  +G L L+      +              +I + + ++ ++
Sbjct: 85  LSRIALVGLVALGLTVVI-LMGELDLSVASTAVLAGVVMA-----QTDNIAVGVLLALLV 138

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
             A G++     +K   +    ATL M  + + + I                      + 
Sbjct: 139 GVAVGLVNAFFVIKVGINSFI-ATLGMLFVLRGLAI------------------VVSNSE 179

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
              L       S  +     +   ++    +   + L+L R      +  +  N++A   
Sbjct: 180 PIPLENISFAISFGLPIVGPLTPRIVIFILVFLVLHLFLTRVRAGREFYAVGGNRQAARD 239

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGG 277
               +    ++ F V S     AGA     R    P            + +I      GG
Sbjct: 240 AGIPVDRRLVTGFVVCSVIAAGAGAINTLERTAADPTSGSTVLLASFAAAIIGGVALTGG 299

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
             S+         L  +                      +++   +  + L  V+
Sbjct: 300 RGSILGTLIGAISLGTLEVGLTL-----------TGVQVDIQQIFIGGVLLLAVM 343


>gi|152997118|ref|YP_001341953.1| monosaccharide-transporting ATPase [Marinomonas sp. MWYL1]
 gi|150838042|gb|ABR72018.1| Monosaccharide-transporting ATPase [Marinomonas sp. MWYL1]
          Length = 313

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 100/315 (31%), Gaps = 26/315 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +    +    ++  L+         S   + ++ +Q  I  + A+G++  +   G + L+
Sbjct: 7   REYAGILGGLLILCLVSSFLSEYFWSVNNVTNIILQTSIVAIVAFGMTYAILLAG-IDLS 65

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+     VI  +       L++P++ +++  CG   G  +         +    M
Sbjct: 66  VGSIVALTGLVLVIGLTNGLP-FGLMLPIALLVAVFCGFSNGFITTWLGVHPFIVTMSFM 124

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                              GI+    +        SL     F   F  Y   + + ++ 
Sbjct: 125 -------------------GIWRGVAMLTSDGQAVSLYDNAPFEYIFNGYLFGIPFPIII 165

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  + A     L +T        +  N +A       +    + ++ ++    G+ G   
Sbjct: 166 LLSMIALNHFVLSKTTFGRRVYIVGGNPEAAAYSGINVSKTTIYSYMITGLMAGVGGVML 225

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A+      P      E   + + V     + GG  ++        I+  +  +   MN  
Sbjct: 226 ASRMFSAQPTAANGMELDAIAACVLGGTSLTGGRGTIIGTLIGALIIAVLSNVMSLMNVD 285

Query: 305 YFNSLLKFDCSFNMR 319
           +F SL+       + 
Sbjct: 286 FFVSLIVKGVVILIA 300


>gi|326789624|ref|YP_004307445.1| ABC transporter transmembrane protein [Clostridium lentocellum DSM
           5427]
 gi|326540388|gb|ADZ82247.1| ABC-type transporter, integral membrane subunit [Clostridium
           lentocellum DSM 5427]
          Length = 351

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/318 (15%), Positives = 99/318 (31%), Gaps = 37/318 (11%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQ---------KYIDSMGIQILIYVMF 52
            +F  +L  +     L+ +   LL  L    T  +          Y+  +  +    ++ 
Sbjct: 5   QVFLKKLMSHRLFWPLVCLAVVLLFNLIKTPTFFKITINNGVFYGYLIDVLNRSSELIIL 64

Query: 53  AWGLSIVVGSLGLLSLNCVIAYAIGAYSYVI---LGSRYGLSIWLLIPVSAMISGACGMI 109
           A G+++VV S G   ++     A+     V     G  Y +   + + +  +   ACG  
Sbjct: 65  AVGMTLVVASSGGTDISVGAVSALAGAVCVFSLGTGEAYNMPYAMGLCLGVLAGVACGAW 124

Query: 110 MGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRF 169
            G    K +   +    ++                   AG  +A  +         +  F
Sbjct: 125 NGFLVAKMKIQPMVATLILF-----------------TAGRGIAQLITGGNILYVKVPSF 167

Query: 170 FRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIF 229
            R  +      +     +     L    IL  ++TA+    +T+  N KA   +      
Sbjct: 168 KRLGAFLPHVPLPTPIFIAIAVVLITIFIL--KKTALGLYIQTVGINAKAGKLVGLNSTL 225

Query: 230 AKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT------SLSK 283
            +   +A      G+AG    +    I  +    +  +  I  V LGG +      S++ 
Sbjct: 226 IQFVTYAFCGLCAGIAGLIITSRIYSIDANNAGLNIELDAILAVALGGNSLSGGKFSIAG 285

Query: 284 IAKATAILIGVVELCCGM 301
                  +  +      M
Sbjct: 286 SIIGAITIQALTTSLYAM 303


>gi|261342542|ref|ZP_05970400.1| inner membrane ABC transporter permease protein YdeY [Enterobacter
           cancerogenus ATCC 35316]
 gi|288315184|gb|EFC54122.1| inner membrane ABC transporter permease protein YdeY [Enterobacter
           cancerogenus ATCC 35316]
          Length = 343

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 90/306 (29%), Gaps = 26/306 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K  ++   LA++   ++ + L           M       ++     + +V     + ++
Sbjct: 6   KNRELSAFLAILALFVVLVALNPAYLSLQTLGMIFASAQILILLALGAALVMLTRNIDVS 65

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 + A +  +     G S+ + I  +  I    G   G+  +  R   +       
Sbjct: 66  VGSTVGLSAIAVGV-ALNSGYSLPVAILFALSIGALAGAFNGVLVVGLRIPAIVATL--- 121

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                           G  G+Y    L + G      +       S  +       +   
Sbjct: 122 ----------------GTLGLYRGAMLLWTGGKWIEGLPPDLKALSAPVALGISP-LGFV 164

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           + F +A     L RTA    +  + DN  A   L   +   ++ AF ++      AG  F
Sbjct: 165 VLFFAAVGAWTLSRTAFGRDFYAVGDNLAAARQLGVAVNRTRIIAFTLNGMLAACAGIVF 224

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AA    +        E   + + V     +LGG  +L         L  +  +       
Sbjct: 225 AAQIGFVPNQTGSGLEMKAIAACVLGGISLLGGTGTLIGALLGAFFLTQIDTVLVLFRLP 284

Query: 305 YFNSLL 310
            + +  
Sbjct: 285 AWWNDF 290


>gi|255283992|ref|ZP_05348547.1| ribose ABC transporter, permease protein [Bryantella formatexigens
           DSM 14469]
 gi|255265445|gb|EET58650.1| ribose ABC transporter, permease protein [Bryantella formatexigens
           DSM 14469]
          Length = 338

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/317 (13%), Positives = 83/317 (26%), Gaps = 18/317 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                ++  +   L   A  S + I ++   +  Y++     S ++   G + L+     
Sbjct: 24  AFAGLIIIYIAFGLINPAVFSGQNILNLLRSMSKYLLIGIAQSYIL-ITGNIDLSIGSMV 82

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     L +   +     I V+ +   A G++ G    KF+                
Sbjct: 83  GMSAMISATLMTHG-VHPLFAILVALLACLATGVVNGYLVGKFKLPPFIAT--------- 132

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L            +        + T +            +    + +Y        + 
Sbjct: 133 --LGTMFVTRGVAYMVNSNRNTDAIATGIGKEAADKFQNFFYYGKTLGVYNTFWIAILVF 190

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L +T        I  N  A       ++     A+ VSS    + G    A   
Sbjct: 191 ILFFFILSKTRTGRHIYAIGSNIDAAKLSGVNVVGTTTKAYLVSSVCSCLVGLILCAQAG 250

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + +     E   V + VI     LGG   L       A+   +      +        
Sbjct: 251 MGNMEAGNMYEMYGVAAGVIGGVSPLGGTGILLGTLAGAAVWQTLENGLNMIGAQVGIQR 310

Query: 310 LKFDCSFNMRHTTLMVI 326
           L             +V+
Sbjct: 311 LVIGIIVVGAVLLDVVV 327


>gi|167617403|ref|ZP_02386034.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia thailandensis Bt4]
          Length = 292

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 80/287 (27%), Gaps = 14/287 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S      +Y +   GL ++  + G+L+       A+GAY                 
Sbjct: 8   PYLISGLGVGAVYALSGVGLVVLYRASGVLNFAFGATGALGAYVAAACLDAGYPQALAWG 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A  + A  +     + +       +   I +  F  +L+ +     G     +    
Sbjct: 68  AAIAASTAASLVYGLALAPRLAAR-DRVVRSIATLGFALVLLGFCEWYWGDTPRRLVLPT 126

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                    +   +       +    M  + + +            RT +    R + ++
Sbjct: 127 DSEALDFGDVRFTYTRIVGLALAFAMMAAIGVVLA-----------RTRLGLQMRALSND 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +     L   ++   ++A+A+S  F G+ G                    I   +  I+G
Sbjct: 176 RHLSGLLGIRVLRVDVAAWAISGVFAGITGLLLGNLVRL--QAAVLTFLVIPAFAAAIVG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            + SL     A   +     L   +  +             +    +
Sbjct: 234 RLASLPATVAAGVAIGLAEALAITVPGFAPYRSATPFLIALVAMLFI 280


>gi|167570014|ref|ZP_02362888.1| ribose ABC transporter, permease protein [Burkholderia oklahomensis
           C6786]
          Length = 337

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 86/299 (28%), Gaps = 27/299 (9%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                 +     ++  QI   V+ + G++ V+   G + L+     A+ A    +   R+
Sbjct: 51  LSSHFLTYDTFSTIANQIPDLVVLSVGMTFVLIIAG-IDLSVGSVLALAASVVSVAALRW 109

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
                    V    + A G + G  ++ +R       +L + E  + +  +         
Sbjct: 110 QWPPLAAALVGVAAAAATGTLTGAVTVGWRIPSFI-VSLGVLEAARGVAYQLTNSRTAYI 168

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G                      F        + +    L    +       L RT    
Sbjct: 169 GDA--------------------FDFLSNPIALGISPAFLIAVAVMVVAQFVLARTVFGR 208

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N++A           K+  FA+  A  G+A  F  +  +   P+     E  +
Sbjct: 209 YLVGIGTNEEAVRLAGVNPRPYKIIVFALMGALAGLAALFQISRLEAADPNAGAGLELQV 268

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + ++VI     +GG  S+        I+  +      +        +       +    
Sbjct: 269 IAAVVIGGTSLMGGRGSVVSTFFGVLIISVLAAGLAQIGANEPTKRIITGAVIVVAVVL 327


>gi|160902387|ref|YP_001567968.1| monosaccharide-transporting ATPase [Petrotoga mobilis SJ95]
 gi|160360031|gb|ABX31645.1| Monosaccharide-transporting ATPase [Petrotoga mobilis SJ95]
          Length = 309

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 95/312 (30%), Gaps = 28/312 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  ++L +F  +  +   I ++  Q+ I  +  +G+++V+   G + L+    +
Sbjct: 16  ALVGFIILFVVLSIFTDSFFNLYNIVNVIRQVSIMAILGFGMTLVI-ISGGIDLSVGSTF 74

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  A     +       + L I V  +I  A G   G+   K +     +    M+    
Sbjct: 75  AFSAVVMASIVKDG--RVLLGIIVGLLIGAAIGAFNGIVISKGKIQPFIVTLATMAIGRS 132

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L                         +   +    F          +   +L M  + 
Sbjct: 133 LTL--------------------AYTEGIPISLFPDSFRFLGRGDIFGIPVPILIMLGIF 172

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
              +  L++T +      I  N++A       +   K   + +S  F  ++     A  +
Sbjct: 173 FLSLYILKKTKLGLYIYAIGGNEEATKLSGVNVDRYKTVVYMLSGLFSAISAIILTARLN 232

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                  +  E   + ++V     + GG   +        +L  +      MN   F   
Sbjct: 233 SAQATFGQGYELDAIATVVLGGASLAGGKGGVLGTLFGALLLGTINNGMNLMNISPFYQD 292

Query: 310 LKFDCSFNMRHT 321
           L       +   
Sbjct: 293 LVKGVIILLAVL 304


>gi|148548442|ref|YP_001268544.1| monosaccharide-transporting ATPase [Pseudomonas putida F1]
 gi|148512500|gb|ABQ79360.1| Monosaccharide-transporting ATPase [Pseudomonas putida F1]
          Length = 331

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/313 (13%), Positives = 94/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +   +L         S     ++  QI   ++ A G++ V+   G + L+     
Sbjct: 29  LAGALLAMIVLFSFLSSHFWSYGTFSTLANQIPDLMVLAVGMTFVLIIGG-IDLSVGSVL 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +  +    +G  +     +   ++   G I G  ++ +R       +L + E+ +
Sbjct: 88  ALAASTVSVAILGWGWGVLPSALLGMAVAALAGSITGGVTVAWRIPSFI-VSLGVLEMAR 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  ++        G   A     +   V                        +    + 
Sbjct: 147 GLAYQFTDSRTAYIGDAYAWFSNPVAFGVSP--------------------AFIIALLVI 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L RT        I  N++A           K+  FA+     G+A  F  +  +
Sbjct: 187 VLAQLVLTRTVFGRYLIGIGTNEEAVRLAGIDPRPYKVLVFALMGLLAGLAALFQISRLE 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +      +        
Sbjct: 247 AADPNAGSGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGASEPTKR 306

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 307 IITGAVIVIAVVL 319


>gi|302555953|ref|ZP_07308295.1| ABC transporter permease [Streptomyces viridochromogenes DSM 40736]
 gi|302473571|gb|EFL36664.1| ABC transporter permease [Streptomyces viridochromogenes DSM 40736]
          Length = 346

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/319 (14%), Positives = 101/319 (31%), Gaps = 25/319 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ +V   +         S++ I  + +   I V+ A G S+VV     + L+     
Sbjct: 34  ILVVFLVMIAVTQAGNSEFLSEQGIKDLLLNATILVLVATGQSLVV-ITRNVDLSVGSTL 92

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I A++      + G + ++ I ++ ++    G++ GL     +   L +    +  I  
Sbjct: 93  GISAFAAGTY-LQGGGNPFVAIALAILLGIGFGLLNGLLVSLGQVPALVVTLGTLYII-- 149

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                              D ++     + +      F          + Y+ L    + 
Sbjct: 150 ----------------RGIDSIWVGSRQITAADLPGGFVDFGSGGISAVPYLALIALAVL 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    L+          +  N +A       +    L+A+    A  G+AGA + A   
Sbjct: 194 IATAYCLKHFVSGRELYALGSNPEAARLAGIPVRKRILAAYTFCGALAGLAGAMYLARFG 253

Query: 255 RISPDMFK-----FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +               ++V  +V  GG  S+   A    +L  +  +   +       L
Sbjct: 254 NVDSGTGNGYELTVVSAVVVGGVVFTGGSGSVYGAALGALLLTSINSVLPALGVSSVWVL 313

Query: 310 LKFDCSFNMRHTTLMVIAL 328
                   +      V+AL
Sbjct: 314 AINGILLILAIAVDRVVAL 332


>gi|145299109|ref|YP_001141950.1| inner membrane ABC transporter permease protein YjfF [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142851881|gb|ABO90202.1| ABC-type sugar transporter, permease protein [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 337

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/323 (14%), Positives = 98/323 (30%), Gaps = 20/323 (6%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +  ++ +V  L+      A  S + I ++        + A G++ V+   G + L+    
Sbjct: 10  VTIMVFLVGYLVCLASFPAFLSTRIICNILTDNAFLGIVAVGMTFVI-LSGGIDLSVGAV 68

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            A        L    G+S +L IP+  M+  + G +MG      +     I    M    
Sbjct: 69  IAFTGVLLAKLIGDLGVSPYLAIPLVMMLGASFGALMGWLIDTLKIPAFIITLAGMF--- 125

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
                       G + +     L     T   L       +           + L M  +
Sbjct: 126 ---------FLRGASFLISEQSLPIDHPTFTYLSSLSWKMAGGGRLS----LLALIMLAV 172

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
               +L   RT   N    I  N  +   +  ++    +  + +S+    +AG  FA   
Sbjct: 173 VLLGMLLANRTRFGNNVYAIGGNATSAALMGISVRQTTIRIYLLSTTLATLAGIVFALYT 232

Query: 254 DRISPDMFKFSENIIVISIVILGG--MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 +      +  I+ V++GG  ++        +   + +  L      +       
Sbjct: 233 -SAGYPLAAVGVELDAIAAVVIGGTLLSGGVGTVFGSLFGVLIQGLIQTYINFDGTLSSW 291

Query: 312 FDCSFNMRHTTLMVIALFLVILM 334
           +            +    ++I+ 
Sbjct: 292 WTKIIIGLLLFCFIALQRMLIVF 314


>gi|157158260|ref|YP_001465044.1| D-xylose ABC transporter, permease protein [Escherichia coli
           E24377A]
 gi|300925645|ref|ZP_07141510.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 182-1]
 gi|301328334|ref|ZP_07221438.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 78-1]
 gi|157080290|gb|ABV19998.1| D-xylose ABC transporter, permease protein [Escherichia coli
           E24377A]
 gi|300418263|gb|EFK01574.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 182-1]
 gi|300845229|gb|EFK72989.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 78-1]
          Length = 393

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|152978178|ref|YP_001343807.1| monosaccharide-transporting ATPase [Actinobacillus succinogenes
           130Z]
 gi|150839901|gb|ABR73872.1| Monosaccharide-transporting ATPase [Actinobacillus succinogenes
           130Z]
          Length = 375

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/368 (12%), Positives = 98/368 (26%), Gaps = 47/368 (12%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           MS F     +   +   + V+         GA  S + I ++  Q  I  + A G+  V+
Sbjct: 1   MSKFKSINLQVYIMFIAIVVIMAFFFVTTDGAYLSARNISNLLRQTSITGILAIGMIFVI 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
            S   + L+      +      I    +G  + L I V+       G   G      +  
Sbjct: 61  ISA-EIDLSVGSMMGLLGGFAAIADVWWGWPLPLTIVVTLAAGVLFGTFTGWWVAYRKVP 119

Query: 121 YLAI-----------------------------------------ATLIMSEIFQNILIK 139
              +                                           L +  +    L  
Sbjct: 120 SFIVTLAGMLIFRGMLVGATNGTTVSPISKEMTAIGQGYLSDTTGMILGIVAVVCFFLWG 179

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                  K                             +     + + +L +  L+   + 
Sbjct: 180 SYQRKARKNLNLTVPNAGKETMKYGLFTICVLGAIYLLNDYRGIPFPVLLLALLAVIGMF 239

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
             R+TA       I  N +A       +   KL  F+++   + +AG   ++     +P 
Sbjct: 240 IARKTAFGRHIYAIGGNIEAARLSGINVEKIKLMIFSMNGFMVAIAGLILSSRLGAGAPS 299

Query: 260 MFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             + +E   + + VI      GG+ S+  +     I+  +      ++   F   +    
Sbjct: 300 AGQNAELDAIAACVIGGASLAGGIGSVYGVVIGALIIALLDNGMSMLDVPTFWQYIVKGS 359

Query: 315 SFNMRHTT 322
              +    
Sbjct: 360 ILLLAVWM 367


>gi|119382807|ref|YP_913863.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119372574|gb|ABL68167.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 326

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/332 (10%), Positives = 100/332 (30%), Gaps = 33/332 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS----------- 80
              + + + +  +  ++Y + A G  ++  + G+ +    +     A +           
Sbjct: 3   FLYASEVLLNGLMAGVMYSLVALGFVLIYKASGIFNYAQGVMALFAAMTLVGIMEGRVPF 62

Query: 81  -------YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI- 132
                  + +  S +G ++  L+ +        G+ + +  L  +        ++     
Sbjct: 63  AHLINAAFGVHLSSFGWTVPGLLAILLTALIMVGLAIAIEKLVLKHLVGQEPIILFMATI 122

Query: 133 -FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                L     +  G     +   L    +                  +    +  +   
Sbjct: 123 GLAWFLEGLGDVMWGADVKVLDVGLPQGISE-TVETMTDGLFGYGFFIDRLDIWATVIAA 181

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L A+++ + + T    A R + D+ +A  S+  ++ F  +  ++++     +AG  +  
Sbjct: 182 VLVAALVGFSQYTKQGRAMRAVADDHQAALSVGISLQFIWIMVWSIAGFVALVAGIMWGT 241

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                          +  + +++LGG TS+        I+    +L             +
Sbjct: 242 KSGVQFSLS---LIALKALPVLMLGGFTSIPGAIVGGLIIGMGEKLFEYFVGPAVGGATE 298

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
              +          +   L ++ R   L   R
Sbjct: 299 NWFA---------YVLALLFLVFRPQGLFGER 321


>gi|297184435|gb|ADI20550.1| hypothetical protein [uncultured alpha proteobacterium
           EB080_L84F03]
          Length = 328

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/324 (10%), Positives = 94/324 (29%), Gaps = 31/324 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR----------- 87
             +  +  ++Y + A G  ++  + G+ +    +     A + V +              
Sbjct: 12  FLNGLMAGVLYALVALGFVLIFKASGIFNYAQGVMALFSAMTLVGIMKGQVPFAHVINAI 71

Query: 88  --YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
               +  +     +         +M L +   +             I     I       
Sbjct: 72  FGTDVHYFGWTVPALFAIILTVAVMVLFAWAVQKYVFRHLVGQEPIILFMATIGLAYFLE 131

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY------VLLGMCFLSASIIL 199
           G   +     +  L   +   I       +F I++   +         L    L   +++
Sbjct: 132 GVGDLMWNSEIKKLDVGLPQGINDAIDNYTFNIFDYGFFIDNLDIVATLIAALLVGGLVI 191

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           + + +    A R + D+ +A  S+  ++ F  +  ++V+     +AG  +          
Sbjct: 192 FSQYSKEGRAMRAVADDHQAALSVGVSLNFIWIMVWSVAGFVALVAGIMWGTKSGVQFSL 251

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                  +  + +++LGG TS+        I+    +L             +   +    
Sbjct: 252 S---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFAIGPMVGGATENWFA---- 304

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
                 +   + ++ R   L   +
Sbjct: 305 -----YVLALIFLVFRPQGLFGEK 323


>gi|304393634|ref|ZP_07375562.1| branched-chain amino acid ABC transporter, permease protein
           [Ahrensia sp. R2A130]
 gi|303294641|gb|EFL89013.1| branched-chain amino acid ABC transporter, permease protein
           [Ahrensia sp. R2A130]
          Length = 291

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 90/305 (29%), Gaps = 29/305 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL--SIWLLI 96
           I S      +Y + A G  ++  +   ++        +GA+  V   ++     S WL +
Sbjct: 7   IVSGIANGCVYGLIALGFVLIYKATEAVNFAQGDFMMLGAFLTVGFANQQFFGLSFWLAV 66

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P++ ++            L+       ++ +I++     IL        G          
Sbjct: 67  PLAIVVLALISGAFDATVLRRMAGESQVSVVILTIALGFILRFAAGTIWG---------- 116

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                ++ +           V+  +     +L    L+A + L+  +T +  A +    N
Sbjct: 117 -HEPVSLETPFAGADVRLGGVVLGVDEIATILVTLLLTALLYLFFSKTKLGLAMQAASQN 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
             A + +   +   +   + +S A   +AG  FAA             +     +I    
Sbjct: 176 MLAAYYMGVPVKRVQTLVWMLSGAVAAVAGVLFAARGAIDPSAGLLGIKAFAAAAIGG-- 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
              SL        I+  +  L           +                  L LV+  + 
Sbjct: 234 -FGSLPGAFVGGLIVGVIEPLAARYGPAGVAQIAP-------------YAILLLVLAFKP 279

Query: 337 HSLLR 341
             L  
Sbjct: 280 GGLFS 284


>gi|291547675|emb|CBL20783.1| Ribose/xylose/arabinose/galactoside ABC-type transport systems,
           permease components [Ruminococcus sp. SR1/5]
          Length = 346

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/317 (13%), Positives = 102/317 (32%), Gaps = 19/317 (5%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             I  ++A +  L + +  G    +  I S+   + +  M   GL  V  S  +  ++  
Sbjct: 32  LGIWIIVAGLIILGMIISKGQFFGKSNIQSILEAVALTGMVCAGLFYVTYSGNMTDMSVP 91

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           I  A G    V   +   +   +   ++  + G     M          +     L++S 
Sbjct: 92  ITMAFGGVMAVQCINFGFVGSIIAGLLAGALIGLINGFMIGKMRANAIIWTLAVNLLISG 151

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           + + +            G  +        +   S  +F+    +++   I +  +++ + 
Sbjct: 152 VIRVVW----------QGKMLYAEDIAKESMQSSAEKFYAISRTYIGGAISLMAIVMLVM 201

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           F+ + +I    +TA     + I  N +             + A+ ++      AG F+AA
Sbjct: 202 FVISWVI--HTKTAFGQKLKIIGTNYEVAKFSGINCTKQIIIAYVINGLCSATAGIFYAA 259

Query: 252 SRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYY 305
            R   S +      +   ++ ++LGG+       S+            +  +   +    
Sbjct: 260 LRKCASYEN-GTGYDFDALTAILLGGVSLNGGKGSIVGTFGGVLAYGILNNILSWIGLGT 318

Query: 306 FNSLLKFDCSFNMRHTT 322
           +   L     F      
Sbjct: 319 YTKYLVQGIVFLFIVWL 335


>gi|19704502|ref|NP_604064.1| beta-methylgalactoside transporter inner membrane component
           [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
 gi|19714778|gb|AAL95363.1| Galactoside transport system permease protein mglC [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 339

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/310 (10%), Positives = 85/310 (27%), Gaps = 8/310 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+     + + +      S +   ++  Q  +  + A G++ ++ + G   L+     
Sbjct: 21  LYLVLFCMLVAIIIKEPTFLSLRNFKNILTQSSVRTIIALGVAGLIVTQG-TDLSAGRQV 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     L             +         +I+ +  +        +   +    F 
Sbjct: 80  GLSAVISGTLLQSMTNVNKAFPKLGEFSIFTTILIVVVVGVVIASINGVVVATLNVHPFI 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +     +    +  Y       +   V    +F +       Y I    +   +    
Sbjct: 140 ATMGTMTIVYGINSLYYDKAGAAPISGFVEKYSKFAQGYIKIGSYTIPYLIIYAAIAT-- 197

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +     +T        +  N +A       ++   +  +A+S A+    G   A    
Sbjct: 198 LIMWTLWNKTKFGKNVFAVGGNPEAAKVSGVNVVLTLMGIYALSGAYYAFGGFLEAGRIG 257

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + + VI      GG+  +S +     IL  +           +   
Sbjct: 258 SATNNLGFMYEMDAIAACVIGGVSFYGGVGRISGVITGVIILTIINYGLTYTGVSPYWQY 317

Query: 310 LKFDCSFNMR 319
           +         
Sbjct: 318 IIKGIIIVTA 327


>gi|15804681|ref|NP_290722.1| putative permease of ribose ABC transport system [Escherichia coli
           O157:H7 EDL933]
 gi|15834326|ref|NP_313099.1| carbohydrate ABC transporter permease [Escherichia coli O157:H7
           str. Sakai]
 gi|168760947|ref|ZP_02785954.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC4501]
 gi|168784714|ref|ZP_02809721.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC869]
 gi|168798242|ref|ZP_02823249.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC508]
 gi|217325030|ref|ZP_03441114.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. TW14588]
 gi|261225210|ref|ZP_05939491.1| putative carbohydrate ABC transport system permease [Escherichia
           coli O157:H7 str. FRIK2000]
 gi|261255538|ref|ZP_05948071.1| putative carbohydrate ABC transport system permease [Escherichia
           coli O157:H7 str. FRIK966]
 gi|12519052|gb|AAG59287.1|AE005642_6 putative permease of ribose ABC transport system [Escherichia coli
           O157:H7 str. EDL933]
 gi|13364549|dbj|BAB38495.1| putative carbohydrate ABC transport system permease [Escherichia
           coli O157:H7 str. Sakai]
 gi|189368561|gb|EDU86977.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC4501]
 gi|189374908|gb|EDU93324.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC869]
 gi|189379099|gb|EDU97515.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. EC508]
 gi|217321251|gb|EEC29675.1| ribose transport system permease protein RbsC [Escherichia coli
           O157:H7 str. TW14588]
 gi|320190781|gb|EFW65431.1| Ribose ABC transport system, permease protein RbsC [Escherichia
           coli O157:H7 str. EC1212]
 gi|326341860|gb|EGD65643.1| Ribose ABC transport system, permease protein RbsC [Escherichia
           coli O157:H7 str. 1125]
 gi|326346565|gb|EGD70299.1| Ribose ABC transport system, permease protein RbsC [Escherichia
           coli O157:H7 str. 1044]
          Length = 324

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/313 (9%), Positives = 93/313 (29%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +         ++  + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 23  ILPILILIVAVFGFITPNFFTESNLLNITRQASINIVLAAGMTFII-LTGGIDLSVGSIL 81

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A + +++      ++  +     +          L +      ++       +    
Sbjct: 82  GTTAVAAMVVSLSPEFAMLSIPAALMLGLLLGLFNGALVAFAGLPPFIVTLGTYTALRGA 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+                           +     F      Y   + ++++    + 
Sbjct: 142 AYLL---------------------ADGTTVINSNINFEWIGNNYLGPVPWLVVIALAVI 180

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 181 VVCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGIMSASRLY 240

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 241 SANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 300

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 301 VIKGAMIIIAVLI 313


>gi|84686568|ref|ZP_01014461.1| branched-chain amino acid ABC transporter, permease protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84665481|gb|EAQ11958.1| branched-chain amino acid ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 343

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 52/343 (15%), Positives = 106/343 (30%), Gaps = 52/343 (15%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG--------- 89
           I +   +   Y + A GL+++ G+LG+++      + IGA+  V L   +          
Sbjct: 8   ILNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFVAVTLQRIFNLSFEQIDPT 67

Query: 90  ------------------------------LSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
                                          S+ L I  +  +    G +M    +K   
Sbjct: 68  KKDFLGNPLKVEVPYVEAWFGADVGDWLIDWSVPLAIIFAIPVMLLVGFVMERGLIKHFY 127

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
                  ++++     +L +      G   I       F G+    +     F  + +IY
Sbjct: 128 KRPHADQILVTFGLAIVLQELIKYFFGANPIQTGAPDAFSGSMDFGV--LLGFDPNVIIY 185

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
             +     L    +  ++  +L+ T      R    +++    L   I       F +++
Sbjct: 186 PYWRLVYFLFAAIVIGAVFSFLQFTTFGMVVRAGMADRETVGLLGINIDKRFTLMFGLAA 245

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  GMAG  +             F     V+ +V    M SL     A  +L  +     
Sbjct: 246 AVAGMAGVMYTPILAPNYHMGMDFLVLSFVVVVVGG--MGSLPGAVAAGFLLGVLQS--- 300

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 F S+ +           ++ +   +++L R   L+  
Sbjct: 301 ------FASMNEIKSLIPGIDQVIIYLVAIIILLTRPRGLMGR 337


>gi|332717023|ref|YP_004444489.1| ribose transport system permease protein [Agrobacterium sp. H13-3]
 gi|325063708|gb|ADY67398.1| ribose transport system permease protein [Agrobacterium sp. H13-3]
          Length = 325

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/321 (13%), Positives = 89/321 (27%), Gaps = 28/321 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L     +     +V  +L+ L      S   I ++  Q+ +  + A G++ V+   G + 
Sbjct: 22  LRSPLALPLAGLIVVSILMGLASDNFFSVNNIMNVLRQVSVVGILAVGMTFVI-LTGGID 80

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+       L    GL   L +P    I    G+  G      +        +
Sbjct: 81  LSVGAVMALVGTLSAGLMVNTGLPASLALPAGLFIGLGIGIFNGALVAWGKMPA-----I 135

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I++     +      I +G   +                          V     +   +
Sbjct: 136 IVTLATMGMARGLGLIYSGGYPVSGIP---------------SWISWFGVGRVGVVPVPV 180

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + M  + A   + L+RTA       +  N+ A           KL+ + +S     +A  
Sbjct: 181 IIMVVIYAVAWVLLQRTAFGRHVYALGGNELAARLSGVKTRRVKLAVYGISGVTAALAAL 240

Query: 248 FFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGM 301
                              +  I+ V+L      GG   +        +L  +      M
Sbjct: 241 ILTGRLMS-GQPNAGVGFELDAIAAVVLGGTAIAGGRGLILGTLIGAVLLGILNNGLNLM 299

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
               +   +       +    
Sbjct: 300 GINPYLQDVIKGGIILLAIYI 320


>gi|307729834|ref|YP_003907058.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|307584369|gb|ADN57767.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
          Length = 368

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/318 (13%), Positives = 88/318 (27%), Gaps = 16/318 (5%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
                L VV  L++            +  +        +FA G ++VV + G + ++   
Sbjct: 56  WFTVALIVVTCLIVGAINPRFFQFATLFDLLHSATTMSLFALG-TLVVLASGGIDVS--- 111

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
             AI A +   +                +++GA G ++           L   +LI++  
Sbjct: 112 FTAIAALTMYGITKAVFAWWPDAPFALILVTGALGGVLLGVVNGLLVHRLKAPSLIVTIG 171

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            Q +         G                +           +       +   +L +  
Sbjct: 172 TQYLYRGLLLTFIGTTFFMNIPHSMDHFGRIPLFFYH-----TADGLRAVLPASVLALVA 226

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
            +      L RT +      +  +      L   +    L  F  +    G+AG    ++
Sbjct: 227 TALVTWWLLNRTMMGRGVYAMGGSLAIAERLGYNLRAIHLFVFGYTGMLAGIAGILHVSN 286

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
               +P        + VI+ VILGG                   L   +      S+L  
Sbjct: 287 NRLANPFDL-VGSELDVIAAVILGGAR------ITGGTGTVAGTLLGVVLVTLIKSVLIL 339

Query: 313 DCSFNMRHTTLMVIALFL 330
               +     ++   + L
Sbjct: 340 VGVPSTWQKVIIGAFILL 357


>gi|158423042|ref|YP_001524334.1| sugar ABC transporter permease protein [Azorhizobium caulinodans
           ORS 571]
 gi|158329931|dbj|BAF87416.1| sugar ABC transporter permease protein [Azorhizobium caulinodans
           ORS 571]
          Length = 324

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/316 (15%), Positives = 87/316 (27%), Gaps = 29/316 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L A +  L L +   A  +   I ++  Q  +    A GL++V+   G L L+      
Sbjct: 27  LLAAGLICLALGIATDAFFTTNNILNVLRQASLLFFLASGLTLVI-LTGGLDLSIGANIG 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + A        +   S  L          A G+  GL   K R         ++  +   
Sbjct: 86  LSACLAA-TVIKATGSPVLGTLTGLATGCAIGICNGLMVAKLRIPSFIATYGMLWVLHGI 144

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                                Y+             F      + + +   +  M     
Sbjct: 145 --------------------TYYYMAGETIHGFPPGFRQIGSGHFLGIPIPVYLMVVFLV 184

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
           +  ++ +RT        I  N  A       I    +  +  S A  G+A   F A  + 
Sbjct: 185 AGTIFAQRTVWGQQIYAIGANPVAARLTGIPIHRRLILVYGFSGAMAGVASIVFLARLNS 244

Query: 256 ISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              D    +  +  I+ V++      GG+ S+        IL  V+     +        
Sbjct: 245 AEGD-IGEAMTLPAIAAVLIGGASLFGGIGSVFGTFIGALILTLVLNGMNLLAINASWQP 303

Query: 310 LKFDCSFNMRHTTLMV 325
           L             M 
Sbjct: 304 LVTGAILVFAVWLDMY 319


>gi|148548196|ref|YP_001268298.1| inner-membrane translocator [Pseudomonas putida F1]
 gi|148512254|gb|ABQ79114.1| inner-membrane translocator [Pseudomonas putida F1]
          Length = 293

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 88/305 (28%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A ++V L  R        +  
Sbjct: 8   LIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGAMVLFAALTFVSLLERGVPFWLSFLVT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A +     +I         G       +    +   I    + +               
Sbjct: 68  LATMIALALLIERAVLRPLVGRSPITLFMATLGLAYIIEGAAQALWGA------------ 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F  +       L   + L   RT I  A R + D+ +
Sbjct: 116 QVHGLELAISDAPLELGGLLLSQFDLFAAATAAALVVLLSLLFNRTRIGLALRAVADDPR 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +       +AV+     +AG  + A               +  + ++I+GG 
Sbjct: 176 AAMSVGIRLPRVWAVVWAVAGFVGLVAGLLWGARLGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+S       I+    +L            ++              +   L +L+R   
Sbjct: 233 TSISGAIVGGLIIGASEKLAEVYLGPLIGGGIENWFP---------YVLALLFLLVRPAG 283

Query: 339 LLRLR 343
           L   R
Sbjct: 284 LFGER 288


>gi|330810603|ref|YP_004355065.1| ribose ABC transporter permease [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327378711|gb|AEA70061.1| ribose ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 325

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 99/313 (31%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +    L         S     ++  QI   ++ A G++ ++   G + L+     
Sbjct: 23  LAGALLAMVALFSALSSHFLSYDTFSTLANQIPDLMVLAVGMTFILIIGG-IDLSVGSVL 81

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +  +    +G S+W    +   ++   G + G  ++ +R       +L + E+ +
Sbjct: 82  ALAASTVSVAVLGWGWSVWPSALLGMAVAALAGTVTGSITVAWRIPSFI-VSLGVLEMAR 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  +         G   A               +   P +F I   F+  +L+     +
Sbjct: 141 GLAYQMTGSRTAYIGDSFA---------------WLSNPIAFGISPSFIIALLVIFIAQA 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                   RT        I  N++A           K+  F++     G+A  F  +  +
Sbjct: 186 VL-----TRTVFGRYLIGIGTNEEAVRLAGINPKPYKILVFSLMGLLAGVAALFQISRLE 240

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +      +        
Sbjct: 241 AADPNAGSGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGATEPTKR 300

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 301 IITGAVIVVAVVL 313


>gi|312126364|ref|YP_003991238.1| inner-membrane translocator [Caldicellulosiruptor hydrothermalis
           108]
 gi|311776383|gb|ADQ05869.1| inner-membrane translocator [Caldicellulosiruptor hydrothermalis
           108]
          Length = 373

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/359 (10%), Positives = 92/359 (25%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  + +++ +   L  G   + + +  +  Q+ I  + A G+  V+   G + L+
Sbjct: 8   RTYTLIIAILLIWTIFTILTDGNFLTPRNLSMLARQMAITALVAIGMVFVI-VAGHIDLS 66

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                        +L    G S    +    ++    G+  G            +    M
Sbjct: 67  VGSVVGFTGAIAGVLQVWNGWSTPATVIAVLIVGIIIGIWQGYWVAYRGVPAFIVTLAGM 126

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF------- 182
                 +L+  K IT                    S+         +++  I        
Sbjct: 127 LVFRGGVLLASKGITISPFKDSFRFIGQGYLNKALSIAFGAVLIVGYLLLTISQRNRRKK 186

Query: 183 ----------------------------------MYYVLLGMCFLSASIILWLRRTAISN 208
                                             +   +L +   +  +    + T    
Sbjct: 187 YNLEVLPMGLEIAKAAVVIALIVAFTGVMISYEGISIPVLILVVFTILLTFVSQNTTFGK 246

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N++A       I    +  F +      +AG    +  D  +       E   
Sbjct: 247 YVYAIGGNKEAASLSGINIKNVTMKIFILMGFLSALAGIVLTSRLDAATSGAGTNMELDA 306

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + ++     LGG  ++        I+  +      +N  Y   L+            
Sbjct: 307 IAAAILGGTSTLGGEGTVPGAIIGALIMASIDNGMSLLNLEYSYQLIVKGLVLVFAVWL 365


>gi|288922721|ref|ZP_06416893.1| inner-membrane translocator [Frankia sp. EUN1f]
 gi|288345940|gb|EFC80297.1| inner-membrane translocator [Frankia sp. EUN1f]
          Length = 375

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 82/299 (27%), Gaps = 29/299 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++             +     S+     I  + A GL ++  S G   L+C    
Sbjct: 51  IVIFVLIVTTFSIWIPDLFLTTSNWQSIAQTGAITAILAVGL-LIPLSAGAYDLSCAQCL 109

Query: 75  AIGAYSY-VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
              +     ++     LS+ + I ++ ++    G++ G      R D         S + 
Sbjct: 110 GFTSLVCSWLMIQGPRLSVPVAIAITLLVGLVVGLLNGFLVAFLRLDSFIATLGSTSLLL 169

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
              ++       G                         F S      + +  + L +  L
Sbjct: 170 AGCILIANSEYLGP--------------------FPSDFASLTSGRFLGVPTICLYLAAL 209

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              +   L  T +    +    N +A              +   S+    +AG  +A+  
Sbjct: 210 GLLVWYVLEHTPLGRRIQATGANAEAARLAGLRTRRLIFGSLVASAVVASIAGILYASVI 269

Query: 254 DRISPDMFKFSENIIVISIVILG------GMTSLSKIAKATAILIGVVELCCGMNFYYF 306
              +         +   +   LG      G  ++     A  +L   V+    +    +
Sbjct: 270 GT-TNQNDGPPYLLPAFTAAFLGATQLKPGTFNVGGTVIAVYLLGTGVQGLQLIGGQIW 327


>gi|283853485|ref|ZP_06370727.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
 gi|283571110|gb|EFC19128.1| inner-membrane translocator [Desulfovibrio sp. FW1012B]
          Length = 291

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/293 (12%), Positives = 81/293 (27%), Gaps = 14/293 (4%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
            + +Y+ S   Q   Y +   G +++  + G+++        +G    V   +     + 
Sbjct: 4   GAPQYLVSGLTQGAAYGLIGLGFTMIFNTTGIINFAQGEFVMLGGMLAVFFAASGLPLVL 63

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
            ++      +    ++  L      G     A +I   +   +                 
Sbjct: 64  AVLLACLATAVVGAIMERLAIRPLAGAPAINAVIITIGVSILLRGGAMLAFG-------- 115

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                    + +        +     +    +VL     L A++ L+   T    A    
Sbjct: 116 ----KDTVALPAFSGVAPILAMGAAIQPQSLWVLAVTLALLAALKLFFSATIQGKAMLAC 171

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
              +KA   +  ++    L +F +S      AGA  A                +   +  
Sbjct: 172 ACQKKAASLVGISVARMALLSFGLSGLIGAAAGAILAPITMTA--YDVGMMLGLKGFAAC 229

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           ILGG+ +    A    +L  +     G     +     F     +       +
Sbjct: 230 ILGGLGNPFGAAAGGILLGVLEAFGAGYVASGYKDAFAFIVLLLLLFVKPSGL 282


>gi|237742090|ref|ZP_04572571.1| galactoside transport system permease mglC [Fusobacterium sp.
           4_1_13]
 gi|229429738|gb|EEO39950.1| galactoside transport system permease mglC [Fusobacterium sp.
           4_1_13]
          Length = 339

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/310 (10%), Positives = 85/310 (27%), Gaps = 8/310 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+     + + +      S +   ++  Q  +  + A G++ ++ + G   L+     
Sbjct: 21  LYLVLFCMLVAIIIKEPTFLSIRNFKNILTQSSVRTIIALGVAGLIVTQG-TDLSAGRQV 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     L             +         +I+ +  +        +   +    F 
Sbjct: 80  GLSAVISGTLLQSMTNVNKAFPKLGEFSIFTTILIVVVVGVVIASINGIVVATLNVHPFI 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +     +    +  Y       +   V    +F +       Y I    +   +    
Sbjct: 140 ATMGTMTIVYGINSLYYDKAGAAPISGFVEKYSKFAQGYIQIGSYTIPYLIIYAAIAT-- 197

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +     +T        +  N +A       ++   +  +A+S A+    G   A    
Sbjct: 198 LIMWTLWNKTKFGKNVFAVGGNPEAAKVSGVNVVLTLMGIYALSGAYYAFGGFLEAGRIG 257

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + + VI      GG+  +S +     IL  +           +   
Sbjct: 258 SATNNLGFMYEMDAIAACVIGGVSFYGGVGRISGVITGVIILTIINYGLTYTGVSPYWQY 317

Query: 310 LKFDCSFNMR 319
           +         
Sbjct: 318 IIKGIIIVTA 327


>gi|209755108|gb|ACI75866.1| putative membrane component of xylose transport system [Escherichia
           coli]
 gi|320645052|gb|EFX14076.1| Xylose transport system permease protein xylH [Escherichia coli
           O157:H- str. 493-89]
 gi|320650319|gb|EFX18802.1| Xylose transport system permease protein xylH [Escherichia coli
           O157:H- str. H 2687]
          Length = 393

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVSTFWQYIVKGAILLLAVWM 385


>gi|20807248|ref|NP_622419.1| ribose/xylose/arabinose/galactoside ABC-type transporter permease
           [Thermoanaerobacter tengcongensis MB4]
 gi|20515754|gb|AAM24023.1| Ribose/xylose/arabinose/galactoside ABC-type transport systems,
           permease components [Thermoanaerobacter tengcongensis
           MB4]
          Length = 324

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 95/324 (29%), Gaps = 29/324 (8%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           FS RL  +     L  +V    +        +   + ++ +Q  I  + A G + V+   
Sbjct: 19  FSTRLQLFSTWGALAILVVFFSI--TSDKFLTVDNLLTVALQTSIIAIIAMGQTYVI-IT 75

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+     A+G     +L +       + I ++ ++    G + G      +     
Sbjct: 76  GGIDLSIGSNIALGGVVAALLMANGFSIP-VSIVIALLVGLFVGTLNGTLIAYGKIPPFI 134

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           +    MS I     +                    L   +        F +  +   + +
Sbjct: 135 VTLGAMSIIRGTAYV--------------------LTGGIPITNVPLEFSAFGMGRILRI 174

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
              ++ M  L A     L +T +      +  N++A       I    ++ +A+S     
Sbjct: 175 PVPVIIMVILIAIFGFILAKTKLGRYIYAVGSNREAARLAGINIPTVLIAVYAISGFLAV 234

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
            AG   A       P      E   V + VI      GG  ++        ++  +    
Sbjct: 235 WAGIIVAGRIISGQPAAGMGYELDAVAASVIGGASLFGGEGTILGTIAGAFVMGVLRNGL 294

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTT 322
             +N   F   +            
Sbjct: 295 NLLNVSAFWQQIIIGAVIIGAVFL 318


>gi|193068432|ref|ZP_03049395.1| putative sugar ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|260856640|ref|YP_003230531.1| putative sugar transporter subunit [Escherichia coli O26:H11 str.
           11368]
 gi|260869235|ref|YP_003235637.1| putative sugar transporter subunit [Escherichia coli O111:H- str.
           11128]
 gi|293410961|ref|ZP_06654537.1| sugar ABC transport system [Escherichia coli B354]
 gi|307313883|ref|ZP_07593499.1| inner-membrane translocator [Escherichia coli W]
 gi|192958384|gb|EDV88824.1| putative sugar ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|257755289|dbj|BAI26791.1| predicted sugar transporter subunit [Escherichia coli O26:H11 str.
           11368]
 gi|257765591|dbj|BAI37086.1| predicted sugar transporter subunit [Escherichia coli O111:H- str.
           11128]
 gi|291471429|gb|EFF13913.1| sugar ABC transport system [Escherichia coli B354]
 gi|306906384|gb|EFN36899.1| inner-membrane translocator [Escherichia coli W]
 gi|315061865|gb|ADT76192.1| predicted sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli W]
 gi|323156203|gb|EFZ42362.1| ribose transport system permease protein rbsC [Escherichia coli
           EPECa14]
 gi|323177327|gb|EFZ62915.1| ribose transport system permease protein rbsC [Escherichia coli
           1180]
 gi|323377554|gb|ADX49822.1| inner-membrane translocator [Escherichia coli KO11]
          Length = 332

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 88/317 (27%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A                      VS  ++      + L         L      ++ + +
Sbjct: 88  AF---------------------VSVCLAFLLQFEVPLAVACLLVLLLGALMGTLAGVLR 126

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +        +     F+   +   I             + +    L M  L 
Sbjct: 127 GVFNVPSFVATLGLWSALRGMGLFMTNALPVPIDENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|217423917|ref|ZP_03455417.1| ABC transporter, permease protein [Burkholderia pseudomallei 576]
 gi|217392980|gb|EEC33002.1| ABC transporter, permease protein [Burkholderia pseudomallei 576]
          Length = 292

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 81/287 (28%), Gaps = 14/287 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S      +Y +   GL ++  + G+L+       A+GAY                 
Sbjct: 8   PYLISGLGVGAVYALSGVGLVVLYRASGVLNFAFGATGALGAYVAAACLDADYPQALAWG 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A  + A  +   + + +       +   + +  F  +L+ +     G     +    
Sbjct: 68  AAVAASTAASLVYGLVLAPRLAARE-RVVRSVATLGFALVLLGFCEWYWGDTPRRLVLPT 126

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                    +   +       +    M  + + +            RT +    R + ++
Sbjct: 127 DSEALDFGDVRFTYTRIVGLALACAMMAAIGVVLA-----------RTRLGLHMRALSND 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +     L   ++    +A+A+S  F G+ G   A                I   +  I+G
Sbjct: 176 RHLSGVLGIRVLSVDAAAWAISGVFAGITGLLLANLVRL--QAAVLTFLMIPAFAAAIVG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            + SL     A   +     L   +  +             +    +
Sbjct: 234 RLASLPATVAAGVAIGLAEALAITVPGFAPYRSATPFLIALVAMLFI 280


>gi|94967934|ref|YP_589982.1| ABC sugar transporter, inner membrane subunit [Candidatus
           Koribacter versatilis Ellin345]
 gi|94549984|gb|ABF39908.1| xylose ABC transporter membrane protein [Candidatus Koribacter
           versatilis Ellin345]
          Length = 400

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/360 (9%), Positives = 94/360 (26%), Gaps = 47/360 (13%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
            +   +   L  ++ +  +   G   + +   ++  Q+ +  + + G+ +V+  +G + L
Sbjct: 33  ARAYTMAAALVAIWIVFEYTTHGVFLNARNFSNLTRQMAVTGVLSVGMLMVI-VIGEIDL 91

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +      +   +  ++ +     +   + ++ +     G   G+ +   R     +    
Sbjct: 92  SVGSLVGLTGMAAALVQANNAWGVTATLTIALVFGLIIGCAQGILTSYARVPSFIVTLGG 151

Query: 129 MSEI----------------FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
           +                     N     +   +   G   A          +   +  R 
Sbjct: 152 LLAWRGVTKAISAGQTIPIQLYNFNSIGQSYLDKPIGWAFAALAVVAIIVTQLRWQSSRK 211

Query: 173 PSSFVIYEIFMYYV-------------------------LLGMCFLSASIILWLRRTAIS 207
                        +                         +L    ++ +    +  T   
Sbjct: 212 RLGLSTLSSTQLALRIGIPSVLSVALVAMLNAYEGIPVPVLLFLIVALAGAFVMSNTTWG 271

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N++A            ++ F V     G+AG  + A     SPD     E  
Sbjct: 272 RYMYAVGGNREAARLSGINTRALTIATFGVLGLLAGLAGVIYTARVGSASPDAGLLLELD 331

Query: 268 IVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + + VI     +GG  +++        +  +       N   F   +            
Sbjct: 332 AIAACVIGGASLMGGRGTIAGACMGALFMASLDNGMSLKNVPDFTQDIVKGTILVAAVAL 391


>gi|23098138|ref|NP_691604.1| branched-chain amino acid ABC transporter permease [Oceanobacillus
           iheyensis HTE831]
 gi|22776363|dbj|BAC12639.1| branched-chain amino acid ABC transporter permease [Oceanobacillus
           iheyensis HTE831]
          Length = 287

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 102/302 (33%), Gaps = 27/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A GL++V G L + +      Y IG Y  + +    GLS WL + +
Sbjct: 8   LFNGLTIGSVYSLVALGLTLVYGILHVPNFAHGAIYMIGGYVTLTMMVYLGLSYWLSMLI 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S ++ G   ++M         + ++I ++I +      L  +  +  G     +      
Sbjct: 68  SVLVVGTLALLMERLIFHPLRNSISINSMIAAIGMLLFLEAFAQLFWGPDFREMPTP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             + + +    +++    +   +  +L++T I      +  N++
Sbjct: 125 ---------YNEVVNVFGLTFTVQRILIVVAAIVVMILLYAFLKKTFIGRTIIALSQNRE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
             F +        +  F ++ A   +A +  +     +          +    I+I+GGM
Sbjct: 176 GAFLVGINANKVAMLTFFIAGALAAIAASLTSP--INLVFPGMGHLVILKAFVIIIIGGM 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL     +                   +     +  + L +++ ++ + 
Sbjct: 234 GSIPGAIVGGYILGFSESIGATYIS-------------SDYKDIIAFVLLIIILSIKPNG 280

Query: 339 LL 340
           + 
Sbjct: 281 IF 282


>gi|229132805|ref|ZP_04261650.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus BDRD-ST196]
 gi|228650632|gb|EEL06622.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus BDRD-ST196]
          Length = 286

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 101/305 (33%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +     +  LI  
Sbjct: 8   FVNGISTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTDSYLLALIGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 68  VAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKIFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L     F    VI   +  +V+L    +  +++L L++T I    R    +++
Sbjct: 116 PIAAKLPLWLQGSFTFGGVILIKYRLFVILVGILIYIALLLLLKKTKIGLMIRAGVMDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++   
Sbjct: 235 GSVQGSAIASLIVGLAGAFTAYY--------------IPDLSLAINMLMLLFFLIVKPTG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|311280681|ref|YP_003942912.1| inner-membrane translocator [Enterobacter cloacae SCF1]
 gi|308749876|gb|ADO49628.1| inner-membrane translocator [Enterobacter cloacae SCF1]
          Length = 327

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 90/317 (28%), Gaps = 27/317 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               ++  L          + + + ++ +Q  +  + A G++ V+ + G + L+     A
Sbjct: 28  LFSLILLVLFFSFSSPFFFNTENLMTIALQTSVIGIMAIGVTFVIITAG-IDLSLGSVVA 86

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                  I  S        ++  + +I+G     +    +        IATL +    + 
Sbjct: 87  FSGVVVGICASFGLPLPLCVL--AGVIAGGLCGYVNAFLVTKAAIPPFIATLGLMMSVR- 143

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                     G   +    R  +        +         + Y +F   ++        
Sbjct: 144 ----------GINMVMTDGRAIYFSDYPMFKMLAQGRLFDVLPYPVFYLAIVALGS---- 189

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L++T I      +  N+ A       +   K+  +A      G+AG   A+  + 
Sbjct: 190 --AYLLKKTVIGRYVYAVGSNETAAHLSGIKVQRVKIFVYAFCGLLTGIAGVILASRLNS 247

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
                      +  I+ V++GG +          I      +          + L     
Sbjct: 248 -GQPTVGVGYELEAIAAVVIGGTS------LMGGIGTIGGTIIGAFIMSVLKNGLNLMGV 300

Query: 316 FNMRHTTLMVIALFLVI 332
                   M I +   +
Sbjct: 301 SQFWQMVAMGIVVVAAV 317


>gi|302531143|ref|ZP_07283485.1| ribose transport system permease RbsC [Streptomyces sp. AA4]
 gi|302440038|gb|EFL11854.1| ribose transport system permease RbsC [Streptomyces sp. AA4]
          Length = 329

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/296 (13%), Positives = 88/296 (29%), Gaps = 24/296 (8%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
                  + ++  Q L+    A G ++++   G + L+   +  +       L +   + 
Sbjct: 43  TFFDLDNLSTVVQQSLVVGTLALGQTLIILIAG-IDLSNASSMVVATLVMAKLAAVTNVF 101

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
                  + +   A  +++GL            A +I    F  +    K I  G+A   
Sbjct: 102 F------ALLAGVALTVVVGLFIGTLATRIKLPAFIITLGTFTGLTAVAKLIAGGQAVPV 155

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
               L +LGT              ++   I + Y +     +  ++   L +TA      
Sbjct: 156 SDGLLTWLGTKR------------YLFGGIPITYGMTLALLMFLAVWYALTKTAWGKHVY 203

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            + +  ++       +    LS + V+    G+A            P+ F+      + +
Sbjct: 204 AVGNAPESARLSGIKVNRTVLSVYLVAGLCFGIAAWQALGRTPNADPNQFQLGNLDSITA 263

Query: 272 IV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           +V     + GG  S+        ++  +      M        L            
Sbjct: 264 VVLGGTSLFGGRGSVLGTLFGALVVAVLRSGLTQMGVDGNYQDLATGALLIAAVVV 319


>gi|283796140|ref|ZP_06345293.1| ribose ABC transporter, permease protein [Clostridium sp. M62/1]
 gi|291076357|gb|EFE13721.1| ribose ABC transporter, permease protein [Clostridium sp. M62/1]
 gi|295092220|emb|CBK78327.1| monosaccharide ABC transporter membrane protein, CUT2 family (TC
           3.A.1.2.-) [Clostridium cf. saccharolyticum K10]
          Length = 351

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 95/309 (30%), Gaps = 27/309 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQ---------KYIDSMGIQILIYVMFAWGLSI 58
           +      L +  +   LL+ +       Q          YI  +  +    V+ A G+++
Sbjct: 8   ITSKRLFLPIFCLALVLLINVITTPDFFQISVRDGVLYGYIIDIINRASELVILAIGMTL 67

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           VV +     ++     A+ A     L +                +     +         
Sbjct: 68  VVSASAGTDISVGAIMAVSAAVCCNLLTGGE----------RAATELAAPLFMGFGAALL 117

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
              L            NI      +    AG  +A  +     T   +  +    +SF  
Sbjct: 118 VGILIGCFNGFLVAKLNIQPMVATLIMFTAGRGIAQLITDGQITYVRVDSYKLLGASFPG 177

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
           + +   +++  +     ++IL  ++TA+    +++  N++A   +    +F     +A  
Sbjct: 178 FPVPTPFIVAVIMVAVTALIL--KKTALGMYIQSVGINKRASRLIGIKAVFIIFLTYAYC 235

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT------SLSKIAKATAILI 292
               G++G   ++       +    +  +  I  V +GG +      SL+        + 
Sbjct: 236 GLCAGLSGLIASSRIYSADANNIGLNMELDAILAVAIGGNSLGGGKFSLAGSVIGAYTIQ 295

Query: 293 GVVELCCGM 301
            +      M
Sbjct: 296 ALTTTLYAM 304


>gi|220916873|ref|YP_002492177.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219954727|gb|ACL65111.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 292

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 94/297 (31%), Gaps = 14/297 (4%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           + A+   +   S  +  L+Y + A+G  +   +   L+        + A+   +     G
Sbjct: 1   MPASIIAQMAISGALMGLVYALIAYGFQLTYATSKSLNFGQGELVMVSAFFS-LTLLDLG 59

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +  WL++P   +     G+ +    ++   +  +   ++++ I    L        G+  
Sbjct: 60  VPYWLMVPGGLVFGALLGLAVERAGVRLALEQRSEGWILLTIILGLFLFSAAENVWGRDD 119

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                 +      V             V        V +G+  + A I ++ RRT +  A
Sbjct: 120 RPFPTPISSDPIHVLG-----------VDVTPLELSVAVGVLAVMALIEVFKRRTLLGKA 168

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
           +  +  ++ A   +  +     + ++A+S     +AG   +             +  +  
Sbjct: 169 FEAVSADRDAGELMGISATRTVMLSYALSGTVAALAGILVSPITTVGPTMAS--ALVLKA 226

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            S+ ++ G+ S   +     +L  +  L        +                   +
Sbjct: 227 FSVAVVAGLDSGFGVVLVGVLLGALESLASFYVGSGWREAPGLALLILALAVRPTGV 283


>gi|326793624|ref|YP_004311444.1| ABC-type transporter integral membrane subunit [Marinomonas
           mediterranea MMB-1]
 gi|326544388|gb|ADZ89608.1| ABC-type transporter, integral membrane subunit [Marinomonas
           mediterranea MMB-1]
          Length = 368

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 89/304 (29%), Gaps = 20/304 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    +V    LF   G+  +   I ++        + A   ++++   G   L+     
Sbjct: 31  VAGALLVAIFFLFTADGSMFTLSGIINVLSPAAQLGILAIAAALLM-IGGEFDLSIGSMV 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A     +      + L + L IP++ +++   G I G   L+       +    +  +  
Sbjct: 90  AFAGLIFGFCVVNFELPLILAIPITLILAAGVGSINGQIVLRTGLPSFIVTLAFLFILRG 149

Query: 135 NILIKWKPITNGKAGIYVA--------------DRLYFLGTTVRSLIRFFRFPSSFVIYE 180
             L+  K  T G   +                    +       + + +     S +   
Sbjct: 150 LSLVGLKAATGGSTQLRGIREAVEGDPLVPFFSGDAFTGFFQWAASMGWIDTFRSGLPKV 209

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             +   +L    L+A     L +T   N       ++ A  +    +   K++ F +++ 
Sbjct: 210 PGIPVEILWFLGLAALATYVLLKTPAGNWIFAAGGDKNAASNSGVPVRKVKVALFMLTAG 269

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVV 295
              +                    E   +I+ VI      GG  S       + I   VV
Sbjct: 270 CAALLAITQVLDAGSTDARRGFMKEFEAIIAAVIGGCLLTGGYGSAIGAFFGSIIFGMVV 329

Query: 296 ELCC 299
               
Sbjct: 330 IGLT 333


>gi|325479126|gb|EGC82223.1| galactoside transport system permease protein MglC [Anaerococcus
           prevotii ACS-065-V-Col13]
          Length = 343

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/279 (10%), Positives = 78/279 (27%), Gaps = 10/279 (3%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYG 89
              + + I ++  Q    +  A G   ++   G   L+        A      +    + 
Sbjct: 38  FITNPRNIINILSQTATRLFIALGTGGLLILAG-TDLSAGRIVGFTAAIAGALLQSPDFA 96

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
              +  I   ++++G    +    +      +      + + I    +            
Sbjct: 97  QKFFPNIQKPSILAGLFAAVAIGAACGAFNGFGVAYLKLHAFIASLGVQLAIFGILQLFI 156

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                    +G          R   +    E+   Y+++     S  +     +T +   
Sbjct: 157 AANPYGPQPIGGFDEKYANIVRGGFTIPGTELQFPYLIIYAAIASVVMWFIWNKTVLGKN 216

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              +  N +A       +    +  F +S    G++G         ++      + ++  
Sbjct: 217 MFAVGGNPEAAEVSGINVTRTIMIVFIISGIMYGLSGFLEGPRLGSVTTTT-GEAYDLDA 275

Query: 270 ISIVIL------GGMTSLSKIAKATAILIGVVELCCGMN 302
           I   ++      GG+ ++  I   + IL  +      + 
Sbjct: 276 IEACLIGGVSFSGGIGTIPGIVLGSIILQVINYGLLYIG 314


>gi|167769017|ref|ZP_02441070.1| hypothetical protein ANACOL_00338 [Anaerotruncus colihominis DSM
           17241]
 gi|167668657|gb|EDS12787.1| hypothetical protein ANACOL_00338 [Anaerotruncus colihominis DSM
           17241]
          Length = 418

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/320 (10%), Positives = 82/320 (25%), Gaps = 15/320 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L  +V  +++ +        + +  +  Q    ++ A G+   +   G   L+     
Sbjct: 94  IILALLVLVVIICIKERKFMQVRVVLDILTQSSTKLIIALGICFTLLIAG-TDLSAGRMV 152

Query: 75  AIGAYSYVILGS-------RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
            + +     +          +     + I +   +S    M+ G  +      Y     +
Sbjct: 153 GLASVISCSMLQTATYANRFFPDLPQVPIILPVALSILACMMFGGLNGFLVAKYDMHPFI 212

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                   I        +                 +    +F           I +   +
Sbjct: 213 ATLATQVIIYGACSLYFDMPPNNSQPIGGVRPDFALLGQFKFAEKAFGTKFPGISILVPI 272

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  +    +L   +T        I  N++A       +    +  F ++    G AG 
Sbjct: 273 ALIVLVVIWFVLN--KTVFGKNVYAIGGNREAAVVSGVNVFRTTMGIFILAGGLYGFAGV 330

Query: 248 FFAASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMN 302
              A     + +     E   + + V+      GG+  +  I     I   +      +N
Sbjct: 331 LEGARTAGATNNYGNGYELDAIAACVVGGVSLNGGIGKVGGILSGVLIFTVIQYGLQFIN 390

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
                  +       +    
Sbjct: 391 VSPMWQQVIKGIIIAVAVAI 410


>gi|291618342|ref|YP_003521084.1| RbsC [Pantoea ananatis LMG 20103]
 gi|291153372|gb|ADD77956.1| RbsC [Pantoea ananatis LMG 20103]
          Length = 708

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/323 (11%), Positives = 95/323 (29%), Gaps = 20/323 (6%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LR +     L  + +++  +  L      S + +  +     +  +FA GL  VV   G 
Sbjct: 30  LRPHSSQGWLTWVLLLFIGVFSLSSDQFLSVQNLLDLAESYAVTGIFALGL-FVVLVTGG 88

Query: 66  LSLNCVIAYAIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           + ++     ++  Y    +          L I ++       GMI        R   + I
Sbjct: 89  IDISFAAVASVVQYFIATLFVRYQFDHALLSIGLAVACGTLFGMINAWLITWLRVVSIII 148

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
              + S +F  ++      +  +   +       L    +        P   ++    + 
Sbjct: 149 TISMQSLLFGLLMWSTGGRSLYQLPEWWITLRSVLPFEWQGQTFQLGLPLLVLLVIATLT 208

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            VLL              +T +      +  + ++   +   +    L A+    A   +
Sbjct: 209 AVLL-------------NKTHLGRQLYAVGGDAESARRIGIRVGLIHLFAYGWLGAMAAI 255

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCC 299
            G         + P+     E  ++ + V     ++GG  ++S       ++  +     
Sbjct: 256 GGLVQVYRMGEVVPNALVGGELDVLAATVLGGASLMGGKGTVSGTLMGVFLIAILKNGLN 315

Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322
            +    +   +       +    
Sbjct: 316 LIGVSNYFMNIVVGGVIMVAIAV 338



 Score = 36.8 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 40/325 (12%), Positives = 91/325 (28%), Gaps = 34/325 (10%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDS---------MGIQILIYVMFAWGLSIVVGS 62
             +L L+A    L   L  G   +     S         +    +   + + GL++ + +
Sbjct: 372 TGLLLLIAFAMALFSILLPGRFFTDSTFLSMAFQLPELGLLTLAMFIAILSGGLNLAIIT 431

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
              L+   +    +G         +    + L +  + +I+   G+I G+          
Sbjct: 432 TANLTSLFIAWVLLGMLPDGAGTGQQLAWLLLAVLGAMLIAALIGLITGV---------- 481

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
            +  +    I   +         G           +L              +      + 
Sbjct: 482 MVTRIGAHPILVTLATMITLNGIG----------IWLTKGAAVSGMPPVVRALGADTLLG 531

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +   L      +A + ++L +T           N  A +          +  + +SS   
Sbjct: 532 IPLPLWVFFVAAALLAVFLGKTRAGKCIYMGGSNINATWFSGINTHRMIVLVYVISSLLC 591

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVEL 297
            +AG    A  +            + V++I++      GG   ++ +  A   L  +   
Sbjct: 592 VLAGLVMMARFNSARMGYGDAYLLLTVLAIILGGTDPNGGFGRVTGVVLALIALQILSTG 651

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTT 322
              MN     SL  +     +    
Sbjct: 652 FNLMNISQHVSLAMWGAVLIVVLAV 676


>gi|261868470|ref|YP_003256392.1| monosaccharide-transporting ATPase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413802|gb|ACX83173.1| monosaccharide-transporting ATPase [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 317

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/300 (11%), Positives = 88/300 (29%), Gaps = 24/300 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           + +    S + + S+  Q+ ++ + A G++ ++ + G + L+     A+ A     + + 
Sbjct: 28  VSIDGFFSARTVWSIVEQVSMFGIIAIGVTFIIITTG-IDLSSGSVVALTAVVSASVVTG 86

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                  L+  +  I    G+             L    L         +     +   +
Sbjct: 87  GDTFSAALLAFAVSILIGAGLG------------LINGGLTAIGSIPPFIATLGMMIIAR 134

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
               +      +  +  +           +   + +Y +++ +        + L R+   
Sbjct: 135 GAAQLYSDGRPIDASSDAFTWIADVNILGLPGLVLLYILIVIVS------HILLSRSTFG 188

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N  A            +  + +  A  G+AGA  AA     +P      E  
Sbjct: 189 RHVYAVGGNLNAAKICGINTNRTLIWVYILGGALSGLAGALLAARTYAGNPSYGLAWELD 248

Query: 268 IVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            +++ VI      GG  ++        I+    +    +    +   +       +    
Sbjct: 249 AIVAAVIGGVSLSGGFGTIPMCVIGALIIGTTNKGLNMLGVDPYWQQIVKGAIIVVAVLL 308


>gi|163939781|ref|YP_001644665.1| inner-membrane translocator [Bacillus weihenstephanensis KBAB4]
 gi|163861978|gb|ABY43037.1| inner-membrane translocator [Bacillus weihenstephanensis KBAB4]
          Length = 286

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 101/305 (33%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +     +  LI  
Sbjct: 8   FVNGVSTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTDSYLLALIGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 68  VAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKIFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L     F    VI   +  +V+L    +  +++L L++T I    R    +++
Sbjct: 116 PIAAKLPLWLQGSFTFGGVILIKYRLFVILVGILIYIALLLLLKKTKIGLMIRAGVMDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++   
Sbjct: 235 GSVQGSALASLIVGLAGAFTAYF--------------LPDLSLAINMLMLLFFLIVKPTG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|222528156|ref|YP_002572038.1| monosaccharide-transporting ATPase [Caldicellulosiruptor bescii DSM
           6725]
 gi|222455003|gb|ACM59265.1| Monosaccharide-transporting ATPase [Caldicellulosiruptor bescii DSM
           6725]
          Length = 373

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/359 (10%), Positives = 92/359 (25%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  + +++ +   L  G   + + +  +  Q+ I  + A G+  V+   G + L+
Sbjct: 8   RTYTLIIAILLIWTIFTVLTDGNFLTPRNLSMLARQMAITALVAIGMVFVI-VAGHIDLS 66

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                        +L    G S    +    ++    G+  G            +    M
Sbjct: 67  VGSVVGFTGAIAGVLQVWNGWSTPATVIAVLIVGIIIGIWQGYWVAYRGVPAFIVTLAGM 126

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF------- 182
                 +L+  K IT                    S+         +++  I        
Sbjct: 127 LVFRGGVLLASKGITISPFKDSFRFIGQGYLNKALSIAFGAVLIVGYLLLTISQRNRRKK 186

Query: 183 ----------------------------------MYYVLLGMCFLSASIILWLRRTAISN 208
                                             +   +L +   +  +    + T    
Sbjct: 187 YNLEVLPMGLEIAKAAVVIALIVAFTGVMISYEGISIPVLILVVFTILLTFVSQNTTFGK 246

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N++A       I    +  F +      +AG    +  D  +       E   
Sbjct: 247 YVYAIGGNKEAASLSGINIRNVTMKIFILMGFLSALAGIVLTSRLDAATSGAGTNMELDA 306

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + ++     LGG  ++        I+  +      +N  Y   L+            
Sbjct: 307 IAAAILGGTSTLGGEGTVPGAIIGALIMASIDNGMSLLNLEYSYQLIVKGLVLVFAVWL 365


>gi|167579298|ref|ZP_02372172.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia thailandensis TXDOH]
          Length = 292

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 80/287 (27%), Gaps = 14/287 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S      +Y +   GL ++  + G+L+       A+GAY                 
Sbjct: 8   PYLISGLGVGAVYALSGVGLVVLYRASGVLNFAFGATGALGAYVAAACLDAGYPQALAWG 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A  + A  +     + +       +   + +  F  +L+ +     G     +    
Sbjct: 68  AAIAASTAASLVYGLALAPRLAAR-DRVVRSVATLGFALVLLGFCEWYWGDTPRRLVLPT 126

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                    +   +       +    M  + + +            RT +    R + ++
Sbjct: 127 DSEALDFGDVRFTYTRIVGLALAFAMMAAIGVVLA-----------RTRLGLQMRALSND 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +     L   ++   ++A+A+S  F G+ G                    I   +  I+G
Sbjct: 176 RHLSGLLGIRVLRVDVAAWAISGVFAGITGLLLGNLVRL--QAAVLTFLVIPAFAAAIVG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            + SL     A   +     L   +  +             +    +
Sbjct: 234 RLASLPATVAAGVAIGLAEALAITVPGFAPYRSATPFLIALVAMLFI 280


>gi|227818674|ref|YP_002822645.1| AraH, Ribose/xylose/arabinose/galactoside ABC-type transport
           system, permease components AraH [Sinorhizobium fredii
           NGR234]
 gi|36958929|gb|AAQ87354.1| Ribose transport system permease protein rbsC [Sinorhizobium fredii
           NGR234]
 gi|227337673|gb|ACP21892.1| predicted AraH, Ribose/xylose/arabinose/galactoside ABC-type
           transport system, permease components AraH
           [Sinorhizobium fredii NGR234]
          Length = 326

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 82/280 (29%), Gaps = 27/280 (9%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
                    + I ++  Q     + A G+++V+       L+   +YA GA  +  L   
Sbjct: 41  FLYPRFLDPQNIKNILSQNAPLGIVAVGMTLVM-ITRGFDLSVGASYAAGATVFASLAVA 99

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                W       ++ G    ++    +        +ATL  + +F  + + +       
Sbjct: 100 GWSLWWAGAV--TLLIGLVAGLINGTIITRINVNPFVATLGTTSVFSGLALLYSN----- 152

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                          V           SF+   I ++ +   +      +     RT   
Sbjct: 153 ----------SSPFVVSDKTFAMIGRGSFLDVPISIWILAAVLVVGELVLA----RTVYG 198

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
            +   I  N +A           + S + +      + G   A+       D+       
Sbjct: 199 RSLYAIGGNDEAARLAGLPTAMLRTSTYVICGVCAALGGMIIASRLSIGQADIGTSMALD 258

Query: 268 IVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
            +  +VI     +GG  S+ + A    I+  +  L   + 
Sbjct: 259 SIAVVVIGGTSLMGGEGSVWRSAIGLMIVAVLTNLLDSLA 298


>gi|328545422|ref|YP_004305531.1| branched-chain amino acid ABC transporter permease [polymorphum
           gilvum SL003B-26A1]
 gi|326415164|gb|ADZ72227.1| Branched-chain amino acid ABC transporter, permease protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 290

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 85/280 (30%), Gaps = 8/280 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  ++ ++  + A GL+++ G   +++      Y +GA+    L              
Sbjct: 6   LVNGLMEGMMLFLIASGLTLIFGVSRIVNFAHGSLYMLGAFLTYALVPVIAPGTVAGFFA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++G     +G          +  A  +M  I    L+           +        
Sbjct: 66  AVILAGIGVAAIGTAFEVLALRRVYGADSLMQLIITIALVFVIRD------VVRWIWGAN 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +                 + +F + +      + A++I  +R T      R   D++ 
Sbjct: 120 SLSVPMPDALMGALVIGDTYFPVFPFVIFAAGLAVVAAMIGVIRFTRTGILLRAATDDRG 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L         + FA  S   G+AG   A   D     +   +  +    + ++GG+
Sbjct: 180 MAALLGINERMIFTAVFAAGSFLAGIAGGMAAPWGDV--NYLLDTTVIVSAFIVCVIGGL 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
            +L        ++     +           L+    +  +
Sbjct: 238 GNLYGALAGAMLVGITKAVGVLYFPRLSMVLIFLIMAVVL 277


>gi|314985189|gb|EFT29281.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL005PA1]
          Length = 333

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 99/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +   I ++GIQ  +  + A+G++ V+ + G + L+     
Sbjct: 35  ALVGLIILCIALFIATPVFLTVPNIINIGIQAAVVAIMAFGMTFVIVTSG-IDLSVGSVA 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A     + S  GL  WL + +  +I    G + GL     +                
Sbjct: 94  ALSAMVSAWMFSNAGLPGWLTLIIGLLIGLLAGAVSGLAIAYGKLPAFI----------- 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  + I      +        +   ++ +    
Sbjct: 143 -----------ATLAMMSVARGLTLVISGGTPIATSDAVNQLGADVGPIPVPVIMLALAG 191

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N++A       +    ++ +A++  F G+AG   A    
Sbjct: 192 VVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALAGVFAGLAGLVLAGRLS 251

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLS-----KIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI G   S        I     +L  +      +N   F   
Sbjct: 252 SAQPQAGFGYELDAIAAVVIGGASLSGGSGKASGIFIGAVLLAVIRNGLNILNVSSFWQQ 311

Query: 310 LKFDCSFNMR 319
           +   C   + 
Sbjct: 312 VVIGCVIALA 321


>gi|284043762|ref|YP_003394102.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283947983|gb|ADB50727.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 327

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 96/313 (30%), Gaps = 28/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  L L L   A  SQ    ++  Q     + A G ++V+   G   L+    +
Sbjct: 29  IVVCFLLLFLTLTLTSDAFFSQANFLNILDQSAPIGIIACGATLVL-IAGGFDLSVGAIF 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+   +     S              +++G    I+    + + G    +ATL  + IF+
Sbjct: 88  ALAGVTAA---SLTNSVGVEAGIAGGVLAGTAAGIVNGVLVNYAGVNPFVATLGSALIFR 144

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                    +  TV             +     +  ++  +    
Sbjct: 145 GLAVVIT---------------TGMLITVTDRAFSNLGQGDVLGLRYSVLILIAFIAISW 189

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +     RT +      +  N +A      ++   +   +A S    G+AG   A+   
Sbjct: 190 VILA----RTKLGRHIYAVGGNAEAARLSGISVERVRAFTYAFSGMAGGVAGVIAASRVA 245

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
               D+    E   + ++VI      GG  ++ +      +L  +      ++   +   
Sbjct: 246 TGQSDVGIGLEFTAISAVVIGGTSIYGGEGAIWRTVLGVLLLALIQNGFNLLDVQPYYQQ 305

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 306 MFLGSIIILAVAI 318


>gi|332285834|ref|YP_004417745.1| putative branched-chain amino acid transport system permease
           [Pusillimonas sp. T7-7]
 gi|330429787|gb|AEC21121.1| putative branched-chain amino acid transport system permease
           [Pusillimonas sp. T7-7]
          Length = 309

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 99/306 (32%), Gaps = 18/306 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI-----WLLIP 97
            +  ++Y + A G  ++  + G+ +        I A +   L       +     +L   
Sbjct: 12  LMTGMLYSLVALGFVLIFKASGVFNFAQGAMVLIAALAMARLSEWIPQWLGIESLFLANV 71

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           ++ + +     ++ +   ++   YL       + +   I I +     G+     +    
Sbjct: 72  LAFIGAALFMWLIAMAIERWVLRYLVNQE-GTTLLMATIGISYFLDGMGQIIFGSSVYTI 130

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +G     +          ++  +           L A +  + + T +  A R + D+ 
Sbjct: 131 DVGMPKDPVFILDTVFEGGLLISLEDLTAAGISALLVAVLAFFFQYTTVGRALRAVADDH 190

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
           +A  S+   +    +  + V+     +AG  + +            +  +  + +VILGG
Sbjct: 191 QAAQSIGIPLNRIWVVVWTVAGLVALVAGIIWGSKFGVQFTLS---TAALRALPVVILGG 247

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           +TS+        I+    +L       Y    ++   +          +   + +L R  
Sbjct: 248 LTSVPGAIIGGLIIGVGEKLSEIYLGPYVGGGIEIWFA---------YMLALVFLLFRPQ 298

Query: 338 SLLRLR 343
            L   +
Sbjct: 299 GLFGEK 304


>gi|307300781|ref|ZP_07580556.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
 gi|306904315|gb|EFN34900.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
          Length = 318

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/311 (15%), Positives = 94/311 (30%), Gaps = 30/311 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + V   L L          + + ++G Q  +  + A G ++V+     + L+     
Sbjct: 19  VLAMLVAVALYLTFASDYFLEPRNLLNVGRQASVVAIVALGQALVI-IARGIDLSVGSVI 77

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A    +L    G     L+                                   ++ 
Sbjct: 78  GLSAVVAAVLMRDTGSETVGLLGGLLTGLACGL--------------------ANGLLYT 117

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + I     T G   I     L   G    S   F  F  +  I++I + ++L+ +    
Sbjct: 118 RLRINPFIATLGTLSIARGIALLMTGGIPVSFGGFAEFVGAGRIFDIPVSFLLMIVLA-- 175

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + ++  RT        I DN KA       +   +L  FA+     G+ G   A +  
Sbjct: 176 VIVHVFASRTVKGREIYAIGDNPKASRLAGVNLRSTRLFVFALCGLLAGLGGLILAGNLA 235

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              P+       + VI+ VIL      GG  S+  +     ++  +      +    +  
Sbjct: 236 SADPN-LGMGYELDVIAAVILGGTALSGGRGSVPGVVIGALLMALLNNAFVLLGISAYWQ 294

Query: 309 LLKFDCSFNMR 319
           ++         
Sbjct: 295 VVTKGLVIIFA 305


>gi|299144234|ref|ZP_07037314.1| ABC transporter, permease protein [Peptoniphilus sp. oral taxon 386
           str. F0131]
 gi|298518719|gb|EFI42458.1| ABC transporter, permease protein [Peptoniphilus sp. oral taxon 386
           str. F0131]
          Length = 316

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 73/271 (26%), Gaps = 6/271 (2%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G++++       IGA         +  + WL      +   A  ++  + ++ F  D++
Sbjct: 31  GGVVNIGIEGMMTIGALIGA-TVGYFSGNPWLAFLCGGLAGMALALLHAIATVNFAADHV 89

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADR----LYFLGTTVRSLIRFFRFPSSFVI 178
                I        L   +    G A                      +        ++ 
Sbjct: 90  VSGIAINLIGPGLALFLSRIFFEGAAMTKSIPFENQLPQVFNGVFTKELIEAYPWMRYMK 149

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
                Y V+     L   +   L +T +    R + ++ +A  +L       K      S
Sbjct: 150 MVFQQYIVVYIAFALVFVVWYLLYKTKLGLRIRAVGEHPQAAETLGVDAYKIKYICVLAS 209

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
               G+ GA  + +            +  I ++ VI GG         A  +      L 
Sbjct: 210 GFLAGLGGASMSLAVVSNYRQTLISGQGFIALAAVIFGGW-KPQGAFAACLLFGAAQGLS 268

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             +                   T L++I   
Sbjct: 269 VTLGNIGIKIDSNLLSMLPYIITLLVLIIFV 299


>gi|150376408|ref|YP_001313004.1| monosaccharide-transporting ATPase [Sinorhizobium medicae WSM419]
 gi|150030955|gb|ABR63071.1| Monosaccharide-transporting ATPase [Sinorhizobium medicae WSM419]
          Length = 341

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 92/306 (30%), Gaps = 21/306 (6%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGI-QILIYVMFAWGLSIVV 60
                 L+ +  ++ +  V   L       +        ++ I Q+ +  + A G++ V+
Sbjct: 19  RRMPPELSIFLVLIGIALVYEILGWLFVGQSFLMNTQRLTIMILQVSVIGIIAVGVTQVI 78

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
              G + L+      + A     +                        +  LP++   G 
Sbjct: 79  -ITGGIDLSSGSVVGMTAMISASVAQASTWP-----------RALYPSLTDLPAIIPIGL 126

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
            + I  L      Q I     P      G+ V+ R      T    +       +F+   
Sbjct: 127 GVGIGLLAGFINGQLIARTKIPPFIATLGMMVSARGVSKWYTKGQPVSGLTEQFNFIGTG 186

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           I+   V L +        + LR T        I  N +A       +    +  +A++  
Sbjct: 187 IWPVIVFLVVA---LIFHIALRYTRYGKFTYAIGANVQAARVSGINVEAHLVKVYAIAGM 243

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVV 295
             G+AG   AA        M    E   + + VI      GG+  ++     T IL  + 
Sbjct: 244 LAGLAGVVTAARAQTAQAGMGVMYELDAIAATVIGGTSLTGGVGRITGTVIGTVILGVMT 303

Query: 296 ELCCGM 301
                +
Sbjct: 304 SGFTFL 309


>gi|104781097|ref|YP_607595.1| ribose ABC transporter permease RbsC [Pseudomonas entomophila L48]
 gi|95110084|emb|CAK14789.1| putative ribose ABC transporter, permease protein RbsC [Pseudomonas
           entomophila L48]
          Length = 330

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 100/313 (31%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +   +L  +      S     ++  QI   ++ A G++ V+   G + L+     
Sbjct: 28  LAGALLAMIVLFSMLSSHFLSYATFSTLANQIPDLMVLAVGMTFVLIIGG-IDLSVGSVL 86

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +  +    +G S+     +   ++   G I G  ++ +R       +L + E+ +
Sbjct: 87  ALAASTVSVAILGWGWSVLPAALLGMAVAALAGSITGSITVAWRIPSFI-VSLGVLEMAR 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  ++        G                   +F  P +F I   F+  +L+ +    
Sbjct: 146 GLAYQFTDSRTAYIG---------------DAFAWFSNPIAFGISPAFIIALLVIVLAQL 190

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                   RT        I  N++A           K+  F +     G+A  F  +  +
Sbjct: 191 VL-----TRTVFGRYLIGIGTNEEAVRLAGIDPRPYKILVFTLMGVLAGLAALFQISRLE 245

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +      +        
Sbjct: 246 AADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGASEPTKR 305

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 306 IITGAVIVIAVVL 318


>gi|16130471|ref|NP_417041.1| predicted sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. MG1655]
 gi|89109352|ref|AP_003132.1| predicted sugar transporter subunit [Escherichia coli str. K-12
           substr. W3110]
 gi|157158445|ref|YP_001463868.1| putative sugar ABC transporter, permease protein [Escherichia coli
           E24377A]
 gi|170082156|ref|YP_001731476.1| sugar ABC transporter membrane protein [Escherichia coli str. K-12
           substr. DH10B]
 gi|194437615|ref|ZP_03069711.1| putative sugar ABC transporter, permease protein [Escherichia coli
           101-1]
 gi|238901711|ref|YP_002927507.1| putative sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli BW2952]
 gi|253772558|ref|YP_003035389.1| inner-membrane translocator [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254162520|ref|YP_003045628.1| putative sugar transporter subunit membrane component of ABC
           superfamily [Escherichia coli B str. REL606]
 gi|256021769|ref|ZP_05435634.1| predicted sugar transporter subunit: membrane component of ABC
           superfamily protein [Escherichia sp. 4_1_40B]
 gi|300930192|ref|ZP_07145609.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 187-1]
 gi|300951742|ref|ZP_07165561.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 116-1]
 gi|300958818|ref|ZP_07170930.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 175-1]
 gi|301648305|ref|ZP_07248045.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 146-1]
 gi|307139182|ref|ZP_07498538.1| predicted sugar transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli H736]
 gi|331643168|ref|ZP_08344303.1| putative ABC transporter permease protein YphD [Escherichia coli
           H736]
 gi|3025271|sp|P77315|YPHD_ECOLI RecName: Full=Probable ABC transporter permease protein yphD
 gi|1788896|gb|AAC75599.1| predicted sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. MG1655]
 gi|1799963|dbj|BAA16448.1| predicted sugar transporter subunit [Escherichia coli str. K12
           substr. W3110]
 gi|157080475|gb|ABV20183.1| putative sugar ABC transporter, permease protein [Escherichia coli
           E24377A]
 gi|169889991|gb|ACB03698.1| predicted sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|194423421|gb|EDX39412.1| putative sugar ABC transporter, permease protein [Escherichia coli
           101-1]
 gi|238863117|gb|ACR65115.1| predicted sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli BW2952]
 gi|242378146|emb|CAQ32919.1| yphD, subunit of YphD/YphE/YphF ABC transporter [Escherichia coli
           BL21(DE3)]
 gi|253323602|gb|ACT28204.1| inner-membrane translocator [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253974421|gb|ACT40092.1| predicted sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli B str. REL606]
 gi|253978588|gb|ACT44258.1| predicted sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli BL21(DE3)]
 gi|260448374|gb|ACX38796.1| Monosaccharide-transporting ATPase [Escherichia coli DH1]
 gi|300314566|gb|EFJ64350.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 175-1]
 gi|300449026|gb|EFK12646.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 116-1]
 gi|300461912|gb|EFK25405.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 187-1]
 gi|301073581|gb|EFK88387.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 146-1]
 gi|309702878|emb|CBJ02209.1| ABC transporter, permease protein [Escherichia coli ETEC H10407]
 gi|315137170|dbj|BAJ44329.1| putative sugar transporter subunit, membrane component of ABC
           superfamily [Escherichia coli DH1]
 gi|315615807|gb|EFU96439.1| ribose transport system permease protein rbsC [Escherichia coli
           3431]
 gi|323936286|gb|EGB32577.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli E1520]
 gi|323944603|gb|EGB40671.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H120]
 gi|323961362|gb|EGB56974.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H489]
 gi|323971040|gb|EGB66288.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli TA007]
 gi|331039966|gb|EGI12186.1| putative ABC transporter permease protein YphD [Escherichia coli
           H736]
          Length = 332

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 88/317 (27%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A                      VS  ++      + L         L      ++ + +
Sbjct: 88  AF---------------------VSVCLAFLLQFEVPLAVACLLVLLLGALMGTLAGVLR 126

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +        +     F+   +   I             + +    L M  L 
Sbjct: 127 GVFNVPSFVATLGLWSALRGMGLFMTNALPVPIDENEVLDWLGGQFLGVPVSALIMIVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|322515467|ref|ZP_08068454.1| xylose ABC superfamily ATP binding cassette transporter, membrane
           protein [Actinobacillus ureae ATCC 25976]
 gi|322118483|gb|EFX90731.1| xylose ABC superfamily ATP binding cassette transporter, membrane
           protein [Actinobacillus ureae ATCC 25976]
          Length = 375

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/345 (14%), Positives = 102/345 (29%), Gaps = 47/345 (13%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L  + V+         GA  S + I ++  Q     + A G+  V+ S   + L+  
Sbjct: 12  YIMLIAIVVIMAFFSVATDGAYVSARNISNLLSQTSTTGILAIGMVFVIISA-EIDLSVG 70

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM-- 129
               +      I    +G S+ + I V+  +    G   G      +     +    M  
Sbjct: 71  SMMDLLGGFVAITNVWWGWSLSVTIIVTLALGLLLGAWNGWWVAYQKVPSFIVTLAGMLA 130

Query: 130 -----------------------------SEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
                                         +    IL     +     G Y       L 
Sbjct: 131 FRGVLIGLTNGTTVSPISQDMTVIGQGYLPDTVGMILGTIGMLLFIAWGSYQRKARQNLN 190

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYV----------LLGMCFLSASIILWLRRTAISNAW 210
             V ++ +         I  +   Y+          +L +  L+ +     R+TA     
Sbjct: 191 LNVPAMGKETMKYGLVAIVVLGAIYLLNDYRGVPFPVLLLALLTIASTFIARKTAFGRHI 250

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N  A       +   KL  F ++   +G+AG   ++     +P   + +E   + 
Sbjct: 251 YAIGGNIDAARLSGIAVEKVKLMIFVINGLLVGIAGLILSSRLGAGAPSAGQNAELDAIA 310

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           + VI      GG+ S+  +     I+  +      ++   F   +
Sbjct: 311 ACVIGGASLAGGIGSIYGVVIGAFIIALLDNGMSMLDVPTFWQYI 355


>gi|227820287|ref|YP_002824258.1| sugar ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227339286|gb|ACP23505.1| probable sugar ABC transporter, permease protein [Sinorhizobium
           fredii NGR234]
          Length = 341

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 52/295 (17%), Positives = 99/295 (33%), Gaps = 22/295 (7%)

Query: 14  ILCLLAVVYPLLLFLFLG--ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
           +L  +A+VY +L +LF+G     + + +  M +Q+ +  + A G++ V+   G + L+  
Sbjct: 30  VLIGIALVYEILGWLFVGQSFLMNSQRLTIMILQVSVIGIIAVGVTQVI-ITGGIDLSSG 88

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               + A     +                        +  LP++   G  + I  +    
Sbjct: 89  SVVGMTAMISASVAQASTWP-----------RALYPSLTDLPAIVPIGLGVGIGLVAGYI 137

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
             Q I     P      G+ V+ R      T    +       +F+   I+   V L + 
Sbjct: 138 NGQLIAKTKIPPFIATLGMMVSARGISKWYTKGQPVSGLTDQFNFIGTGIWPVIVFLVVA 197

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                  + LR T        I  N +A       +    +  +A++    G+AG   AA
Sbjct: 198 ---LIFHIALRYTRYGKFTYAIGANVQAARVSGINVEAHLIKVYAIAGMLAGLAGVVTAA 254

Query: 252 SRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
                   M    E   + + VI      GG+  ++     T IL  +      +
Sbjct: 255 RAQTAQAGMGVMYELDAIAATVIGGTSLTGGVGRITGTVIGTIILGVMTSGFTFL 309


>gi|222082931|ref|YP_002542296.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727610|gb|ACM30699.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 299

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 92/305 (30%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+L+          A ++V L  R           
Sbjct: 14  LVGGLLSGVMYSLVAIGFVLIYKTSGVLNFAQGSMLLFAALTFVSLVERGVPFALAFAIT 73

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A++      I                 +    +   I    + I               
Sbjct: 74  FAVMVLIGIAIERTVLRPLTNKPPITLFMATLGLSYIIEGAAQLIWG------------T 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I    F    V+   F  +       + A + ++ R T I  A+R + D+Q 
Sbjct: 122 QVHGLDLGIEDVPFEVGGVLISQFDMFAAAVAAGMVALLSVFFRYTRIGLAFRAVADDQF 181

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   + +   + +A +     +AG  + A               +  + +++LGG 
Sbjct: 182 AALAVGLKLPWIWATVWAAAGIVALVAGLLWGARLGVQFSLS---LVVLKALPVLVLGGF 238

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++    +L       YF   ++   +          +     +L+R   
Sbjct: 239 DSILGAIVGGLLIGATEKLAEVYIGEYFGGGIESWFA---------YVVALAFLLIRPSG 289

Query: 339 LLRLR 343
           L   +
Sbjct: 290 LFGQK 294


>gi|330837595|ref|YP_004412236.1| inner-membrane translocator [Spirochaeta coccoides DSM 17374]
 gi|329749498|gb|AEC02854.1| inner-membrane translocator [Spirochaeta coccoides DSM 17374]
          Length = 362

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/331 (10%), Positives = 103/331 (31%), Gaps = 36/331 (10%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             +++ +L ++ ++  L              + +   Q     + A  +  ++   G + 
Sbjct: 28  FTQWEVLLGIIFILMVLFFTGRTPYFLDWFNLMNASFQFSEKAIMALPMVFII-MCGDID 86

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++     A+  +   ++    G ++ +++   A  + A  +   L +             
Sbjct: 87  ISVASIIALCGFLMGMVADAGGSTVQIIVVGLATGTVAGLINGLLIT------------- 133

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                   + +  + I  G A   + +  +               P + + +++ +Y VL
Sbjct: 134 GFRMPAIAVTLATQAIYRGIAKAIMTEHAFTRYPEGFGYFGQGYIPGTVIPFQLVLYLVL 193

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +            RT        I ++Q+A       +  A++  + +   F G+A  
Sbjct: 194 ALIMGFIL------HRTMFGWNLYAIGNSQEAARFSGINVQKARVINYMLMGFFTGIASI 247

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
              +       ++    +  ++  +V     I GG  ++  +  A  ++           
Sbjct: 248 LLLSRILSARSNIATGYDMEVITLVVLGGVSINGGKGNMGGVVIAAFLVG---------- 297

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
            Y    +     S  +       + +  V+L
Sbjct: 298 -YLKFGMGLLKLSSTVMSIVTGGLLIVAVLL 327


>gi|288961452|ref|YP_003451791.1| simple sugar transport system permease protein [Azospirillum sp.
           B510]
 gi|288913760|dbj|BAI75247.1| simple sugar transport system permease protein [Azospirillum sp.
           B510]
          Length = 325

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 103/320 (32%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + + ++  + ++  +L+     A      + S+    +I  + A G+ ++V   G + 
Sbjct: 4   LRRSETVIAGILLLAMVLIGTINPAFWQLDNLFSLMRSNVIIGIMAMGV-LLVLISGGID 62

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++         Y  +      G +  +L  ++A + G     +    +        I TL
Sbjct: 63  VSFPAFAVAAMYLTIKGMLALGYNGVVLPLLAATLMGLAFGAVNGFFVYKFRMIPLIVTL 122

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             S + +  L+       G  G  + +        +          +        +  ++
Sbjct: 123 GTSAMVRGFLL-------GVVGTSMININKMPTALIDFARTDVVSVTKADGTTYGLTAMV 175

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    L+ ++ L LR T I  +   +  + +A       +       + V+ A  G AG 
Sbjct: 176 LIYLGLALAMHLVLRYTMIGRSAYALGGDPEAARRAGFDLRKTIFFIYCVAGALAGFAGL 235

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
             +      +P  F   E  ++ ++V     I GG  S+        +L+ V      M 
Sbjct: 236 LHSGMIWLANPRDFVGLELDVIAAVVLGGASIFGGRGSVLGTMLGVFMLVMVKNSLIIMR 295

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
                 L+            
Sbjct: 296 VDTTWQLVVVGLIVIAATAL 315


>gi|269928617|ref|YP_003320938.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
 gi|269787974|gb|ACZ40116.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
          Length = 285

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 85/261 (32%), Gaps = 14/261 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                +  + + GLS+V G +  ++L     Y +G Y      +    + WL +P  A++
Sbjct: 12  LSYASLLFLISVGLSVVFGLMRFVNLATGALYIVGGYV-AWSVANRTDNFWLALPAGAIM 70

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +   G+++    L        +   +   +   +    + I  G      A  +    T 
Sbjct: 71  ALIIGVVIERGFLDRLLGKELMQVSLTLGVAYIVADVTRWIWGGDPLRVRAPEMLRGSTR 130

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +              ++  +   +++    L+  +   L RT      R   D+ +    
Sbjct: 131 LFG-----------SVFPTYRLALIVIGAVLAIIVWYLLERTRWGAYVRAGVDDMEMLEC 179

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L           FA+ +   G+ GA              +       + +V+LGG+ S+ 
Sbjct: 180 LGVNGRRVFSVVFALGALLCGLGGALGTPVTGVSPGIDSQMLLM--ALIVVVLGGLGSVL 237

Query: 283 KIAKATAILIGVVELCCGMNF 303
               A+ ++  V  +      
Sbjct: 238 GAIVASGVVGMVDNMVRTFWP 258


>gi|270263516|ref|ZP_06191785.1| transporter [Serratia odorifera 4Rx13]
 gi|270042400|gb|EFA15495.1| transporter [Serratia odorifera 4Rx13]
          Length = 329

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 94/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +         +   + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 29  ILPILILIVAVFGFVAPNFFTDANLLNIARQASINIVLAAGMTFII-LTGGIDLSVGSML 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A     +       +  L    A+++G    +     + + G    I TL      +
Sbjct: 88  GTTAVVA--MAVSLMPGMAGLSIPLALLAGLGMGLFNGFLVAYAGLPPFIVTLGTYTALR 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                                          +     F      Y   + ++++    + 
Sbjct: 146 GAAYLLAD-------------------GTTIINSNISFEWIGNAYLGPIPWLVIIAFAVI 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 187 ALCWFILRRTTLGVHIYAVGGNIQAARLTGIKVGAVLLFVYGMSGLLSGLGGVMSASRLY 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 247 SANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 306

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 307 VIKGAVIIIAVLI 319


>gi|300713120|ref|YP_003738932.1| sugar ABC transporter membrane protein [Halalkalicoccus jeotgali
           B3]
 gi|299126804|gb|ADJ17141.1| sugar ABC transporter membrane protein [Halalkalicoccus jeotgali
           B3]
          Length = 325

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 90/296 (30%), Gaps = 27/296 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+  D I+ +  +    L  L      + + + ++  Q  +  +   GL++V+ S   + 
Sbjct: 18  LSWRDHIVLVSLLALMGLFSLTSSYFLTIENLLNIARQTAVVAVLGVGLTMVIISA-EID 76

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++     A+ A    +  +     I       A++       +   +  F   Y  I + 
Sbjct: 77  VSVGSVMALSAVLAAMALNAGFGWI------GAVVVALGVGTIVGLTNGFFTVYFGIPSF 130

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           +++            I  G   I V D                 F + F      +  ++
Sbjct: 131 LVTLGMLAAARGAALIVTGTETIVVRDP---------------GFFNVFAGSIGPIPAIV 175

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +        +   L  T       T  D+ +A           KL+   V+    G AG 
Sbjct: 176 IWAGLAVVLVHYVLSYTRFGRHIYTTGDDSQAARYNGIDTAKVKLTTLGVTGTLAGFAGL 235

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELC 298
                     PDM    E  ++ +++     + GG   ++       +L  +    
Sbjct: 236 LMIGRLSAARPDMGMGIELAVIAAVILGGTSLFGGRGWVTGTIIGALLLSVIDNGL 291


>gi|329117603|ref|ZP_08246320.1| ribose transport system permease protein RbsC [Streptococcus
           parauberis NCFD 2020]
 gi|326908008|gb|EGE54922.1| ribose transport system permease protein RbsC [Streptococcus
           parauberis NCFD 2020]
          Length = 316

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/312 (9%), Positives = 88/312 (28%), Gaps = 24/312 (7%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   +++ L      +   + ++ +Q+      A+G++ V+   G + L+     A
Sbjct: 14  LVALIGLMIIITLLNPNFLTTNNLMNLLLQVTANGFIAFGMTFVI-LTGGIDLSVGSILA 72

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +     L  +       +I    +      +   L +                  F  
Sbjct: 73  LSSALTAGLIGKGVPVGVAIILALGLGGIFGMLNGLLIAY------------GKLAPFIV 120

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L                + +    +         +     V + + + +++        
Sbjct: 121 TLATMTIFRGATLVYSNGNPITKGLSDSFFFQFLGQGYLLGVPFPVILMFIIF------L 174

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + + L +TA   +   +  N+KA +     +   K+  + +S     M+G    +    
Sbjct: 175 ILYVLLHKTAFGKSVYALGGNEKAAYISGVKLNKVKIIIYTISGMMAAMSGLIITSRLSS 234

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+      GG   +        I+  +      +    F   +
Sbjct: 235 AQPTAGASYEMDAIAAVVLGGTSLSGGKGRILGTLIGALIIGVLNNGLNIIGVSAFWQQV 294

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 295 VKGVVILIAVLL 306


>gi|297204220|ref|ZP_06921617.1| ABC transporter permease [Streptomyces sviceus ATCC 29083]
 gi|197714089|gb|EDY58123.1| ABC transporter permease [Streptomyces sviceus ATCC 29083]
          Length = 346

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/326 (12%), Positives = 106/326 (32%), Gaps = 25/326 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ +V  ++  +      +++ I  + +   I V+ A G S+VV     + L+     
Sbjct: 34  ILVVFLVMIVVTQIGNSDFLTEQGIKDLLLNATILVLVATGQSLVV-ITRNVDLSVGSIL 92

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            I A++        G +  + I ++ ++    G++ GL     +   L +    +  I  
Sbjct: 93  GISAFAAGTY-LHGGGNPVVAIVLAVLLGIGFGLLNGLLVSLGQVPALVVTLGTLYII-- 149

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                              D ++     + +      F +        + ++ L    + 
Sbjct: 150 ----------------RGIDSIWVGSRQITAADLPDSFVNFGSGGISAVPWLALIALAVL 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +   +L+          +  N +A       +    L+A+       G+AGA + A   
Sbjct: 194 IATAYYLKHFGSGRELYALGSNPEAARLAGIPVRKRILAAYTFCGGLAGLAGAMYLARFG 253

Query: 255 RISPDMFK-----FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +               ++V  +V  GG  S+   A    +L  +  +   +       L
Sbjct: 254 NVDSGTGTGYELTVVSAVVVGGVVFTGGSGSVYGAALGALLLTSINSVLPALGVSSVWVL 313

Query: 310 LKFDCSFNMRHTTLMVIALFLVILMR 335
                   +      ++AL + + ++
Sbjct: 314 AINGILLILAIAVDRIVALRVALALK 339


>gi|148252319|ref|YP_001236904.1| putative branched-chain amino acid ABC transporter permease
           [Bradyrhizobium sp. BTAi1]
 gi|146404492|gb|ABQ32998.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 305

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 98/290 (33%), Gaps = 15/290 (5%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           V G + L++L     Y +GAY               +    + + GA   +     L   
Sbjct: 28  VFGIMDLVNLAHGSLYMMGAYFAAT----------FVAWTGSFVLGAVMALGATLLLGIV 77

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
            ++ A+  L   +   ++L  +  I      + +      L   + S + F       + 
Sbjct: 78  LEFTALRHLYGRDHLDHVLATFGLILFFNEAVRLIWGPAGLALPLPSWLAFPVTIMPGIQ 137

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
           Y  +   +++    ++  + L + RT I    R    N++   +L   I       F + 
Sbjct: 138 YPAYRLAIIVVALLVALLLYLGVMRTRIGMLIRAGASNREMIGALGINIKLLYTLVFGLG 197

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           +A  G+AG   A             +  I+   ++++GG+ S+     A  ++  +  + 
Sbjct: 198 AALAGLAGLMQAPILTV--QIGMGENILILAFVVIVIGGIGSIRGAFIAAIMIGLIDTMG 255

Query: 299 CGMNFYYFNSLL---KFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTP 345
                     +L       +     + L+ + + +V++ R   L      
Sbjct: 256 RAFLPNLLRQVLNSAAASTAAPAMSSMLIYLLMAIVLVARPEGLFPANRR 305


>gi|191168871|ref|ZP_03030643.1| putative sugar ABC transporter, permease protein [Escherichia coli
           B7A]
 gi|190901077|gb|EDV60854.1| putative sugar ABC transporter, permease protein [Escherichia coli
           B7A]
          Length = 332

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 88/317 (27%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A                      VS  ++      + L         L      ++ + +
Sbjct: 88  AF---------------------VSVCLAFLLQFEVPLAVACLLVLLLGALMGTLAGVLR 126

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +        +     F+   +   I             + +    L M  L 
Sbjct: 127 GVFNVPSFVATLGLWSALRGMGLFMTNALPVPIDENEVLDWLGGQFLGVPVSALIMIVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGFIIVVAVLANILL 323


>gi|229084927|ref|ZP_04217180.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus Rock3-44]
 gi|228698400|gb|EEL51132.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus Rock3-44]
          Length = 273

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 92/278 (33%), Gaps = 13/278 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  +  LI  
Sbjct: 8   FVNGVSTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYMLALIGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             M      ++         G+++    + +  +               +          
Sbjct: 68  VVMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKVFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +          F    +I   +  +V++    +   ++L LR+T I    R    +++
Sbjct: 116 PISAKLPSWLQGSFTFDGIILIKYRLFVIIVGVVIYIGLMLLLRKTKIGLMIRAGVMDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
            S+   A A+ I+                ++      F
Sbjct: 235 GSVQGSALASLIVGLAGAFTAYYIPDLSLAINMLMLLF 272


>gi|225570339|ref|ZP_03779364.1| hypothetical protein CLOHYLEM_06436 [Clostridium hylemonae DSM
           15053]
 gi|225160871|gb|EEG73490.1| hypothetical protein CLOHYLEM_06436 [Clostridium hylemonae DSM
           15053]
          Length = 316

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/320 (16%), Positives = 104/320 (32%), Gaps = 28/320 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFL--GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
           +  KY ++  +  V+  L++   +   A      I S+  QI +  + A G+ + +  LG
Sbjct: 5   KFQKYIRLYAMFIVLLILVIVFSVMTPAFLKSSNISSVLRQISMLGITAVGMMLPI-LLG 63

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+              +    G +    + V+ +IS   GMI G+   K     L +
Sbjct: 64  GIDLSVGAIITFVNIICAYMMVNKGWNAVAAVAVTLIISILIGMIDGIIIAKVNIPPLIM 123

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
                                    + +    Y L   +       +F      Y  F  
Sbjct: 124 TF--------------------AMQMILEGASYVLSDGLPIYGFPEKFAVIGQGYIAFAP 163

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
             ++ M    A     L +T     +  +  N++A       +   K  A+ +S  F G+
Sbjct: 164 IPVIIMILCFAFGAFVLNKTYFGRFFYAVGGNEEASKLSGINVFSVKTLAYTLSGLFAGI 223

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCC 299
           AG    +  +  +P+  K  E  ++ +IV     I GG   +  +     I+  +     
Sbjct: 224 AGIVMLSRTNSGTPNAGKGFEMDVLTAIVLGGVSINGGRGRIHNVIAGVLIIGVLQNGLI 283

Query: 300 GMNFYYFNSLLKFDCSFNMR 319
            MN   +   +         
Sbjct: 284 LMNVGTYVQYIVKGIVLAAA 303


>gi|121607605|ref|YP_995412.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121552245|gb|ABM56394.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 304

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 78/284 (27%), Gaps = 13/284 (4%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               +IY + A+G  +   +   L+     A  +GA   + L         +L  V    
Sbjct: 25  IALGMIYAVIAFGYQLTFQTSDTLNFGQGDALMLGAMVGLTLVGLGLNYWLMLPIVILFG 84

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G++  L              ++ +     I         G                
Sbjct: 85  MLQGGLVEWLGVRPALKIKSEFGWIMSTIALGIIFKNVAENLWG-----------RDDLK 133

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             S +                  V+ G   +  ++ L+ R+T    A     +++ A   
Sbjct: 134 FPSPLPESPLSLLGAKVLPMEILVVFGAIAMMLAVELFNRKTIYGKAVVATFNDRDAAGL 193

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +          ++A+SSA   +AG   A     ++         +   ++ I+GG+TS  
Sbjct: 194 MGINTGLVITFSYALSSASAALAGVLIAPL--TLTGATMGAVLGLKAFAVAIIGGLTSGL 251

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            I     +L              +  +        +       +
Sbjct: 252 GIIVGGIMLGAAEMFTGYYVSSGYKDVPGLLLLLLVLALKPSGL 295


>gi|29827510|ref|NP_822144.1| sugar uptake ABC transporter permease protein [Streptomyces
           avermitilis MA-4680]
 gi|29604610|dbj|BAC68679.1| putative simple sugar ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
          Length = 321

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 85/290 (29%), Gaps = 31/290 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    VV  L    F     S     +  +Q+   ++ A G+++ +G+ G + L+     
Sbjct: 26  VYAGVVVLLLFNVAFTDHFLSAANFRTQAVQVAPVLVVALGMALAIGTEG-IDLSVGSVM 84

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A S  +L    G   W+ +    +     G+  G                       
Sbjct: 85  ---ALSTSLLSLYLGYGPWVALLTVVVGGVVIGLANGTLIAFVGVQP------------- 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             ++    +  G  G+ +            +        S      + + Y++L    L+
Sbjct: 129 --IVATLALMVGTRGLALVMLPQLKDVRDPT------LLSLGSGDVVGVPYLVLIAAALA 180

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +   +RRT        I D++ A       +    ++ +  S     +AG    A   
Sbjct: 181 VVVAFVVRRTTFGRQLLAIGDSRPAAQLAGLPVRRVLITVYVCSGVLAAVAGFLSTARLS 240

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELC 298
              P        +  I+ V++      GG   +        ++  +    
Sbjct: 241 ASDPTSLGQLMELSAITAVVVGGTPLTGGRVRVGGTVAGALLIQLLTATL 290


>gi|193064034|ref|ZP_03045119.1| putative sugar ABC transporter, permease protein [Escherichia coli
           E22]
 gi|194427324|ref|ZP_03059874.1| putative sugar ABC transporter, permease protein [Escherichia coli
           B171]
 gi|218696173|ref|YP_002403840.1| putative sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli 55989]
 gi|256017305|ref|ZP_05431170.1| putative sugar transporter subunit: membrane component of ABC
           superfamily protein [Shigella sp. D9]
 gi|260845176|ref|YP_003222954.1| putative sugar transporter subunit [Escherichia coli O103:H2 str.
           12009]
 gi|300817683|ref|ZP_07097898.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 107-1]
 gi|309794406|ref|ZP_07688829.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 145-7]
 gi|332278300|ref|ZP_08390713.1| conserved hypothetical protein [Shigella sp. D9]
 gi|192929269|gb|EDV82878.1| putative sugar ABC transporter, permease protein [Escherichia coli
           E22]
 gi|194414645|gb|EDX30917.1| putative sugar ABC transporter, permease protein [Escherichia coli
           B171]
 gi|218352905|emb|CAU98704.1| putative sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli 55989]
 gi|257760323|dbj|BAI31820.1| predicted sugar transporter subunit [Escherichia coli O103:H2 str.
           12009]
 gi|300529671|gb|EFK50733.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 107-1]
 gi|308121862|gb|EFO59124.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 145-7]
 gi|320200110|gb|EFW74699.1| putative sugar ABC transport system, permease protein YphD
           [Escherichia coli EC4100B]
 gi|323159270|gb|EFZ45257.1| ribose transport system permease protein rbsC [Escherichia coli
           E128010]
 gi|324118244|gb|EGC12140.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli E1167]
 gi|332100652|gb|EGJ03998.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 332

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 88/317 (27%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A                      VS  ++      + L         L      ++ + +
Sbjct: 88  AF---------------------VSVCLAFLLQFEVPLAVACLLVLLLGALMGTLAGVLR 126

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +        +     F+   +   I             + +    L M  L 
Sbjct: 127 GVFNVPSFVATLGLWSALRGMGLFMTNALPVPIDENEVLDWLGGQFLGVPVSALIMIVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|126452864|ref|YP_001064340.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a]
 gi|167843688|ref|ZP_02469196.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210]
 gi|167908895|ref|ZP_02495986.1| ABC transporter, permease protein [Burkholderia pseudomallei 112]
 gi|242317505|ref|ZP_04816521.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b]
 gi|254186584|ref|ZP_04893101.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254298615|ref|ZP_04966066.1| ABC transporter, permease protein [Burkholderia pseudomallei 406e]
 gi|126226506|gb|ABN90046.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106a]
 gi|157808710|gb|EDO85880.1| ABC transporter, permease protein [Burkholderia pseudomallei 406e]
 gi|157934269|gb|EDO89939.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|242140744|gb|EES27146.1| ABC transporter, permease protein [Burkholderia pseudomallei 1106b]
          Length = 292

 Score = 51.4 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 81/287 (28%), Gaps = 14/287 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S      +Y +   GL ++  + G+L+       A+GAY                 
Sbjct: 8   PYLISGLGVGAVYALSGVGLVVLYRASGVLNFAFGATGALGAYVAAACLDADYPQALAWG 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A  + A  +   + + +       +   + +  F  +L+ +     G     +    
Sbjct: 68  AAVAASTAASLVYGLVLAPRLAARE-RVVRSVATLGFALVLLGFCEWYWGDTPRRLVLPT 126

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                    +   +       +    M  + + +            RT +    R + ++
Sbjct: 127 DSEALDFGDVRFTYTRVVGLALACAMMAAIGVVLA-----------RTRLGLHMRALSND 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +     L   ++    +A+A+S  F G+ G   A                I   +  I+G
Sbjct: 176 RHLSGVLGIRVLSVDAAAWAISGVFAGITGLLLANLVRL--QAAVLTFLVIPAFAAAIVG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            + SL     A   +     L   +  +             +    +
Sbjct: 234 RLASLPATVAAGVAIGLAEALAITVPGFAPYRSATPFLIALVAMLFI 280


>gi|256752979|ref|ZP_05493801.1| Monosaccharide-transporting ATPase [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256748139|gb|EEU61221.1| Monosaccharide-transporting ATPase [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 318

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 83/312 (26%), Gaps = 27/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V   ++  +            ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 23  LIGLVGLIVVFSILSPRFLDYYNFTNVLRQTSLNAIMAVGMTFVI-LTGGIDLSVGSILA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             +     +       I  ++    + +G       +        ++A   ++       
Sbjct: 82  FSSAITAGMLKDGSPLIIAVLAGLIIGTGLGFFNGFVIIRWNIPPFIATFAMMTVARGLT 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           ++        G                         F      Y   +   ++    + A
Sbjct: 142 LVYTNGQPITG---------------------LGAAFGYIGNGYIGPIPVPIILTVLIFA 180

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L+   +         N +A            L  +++S     ++G    +  + 
Sbjct: 181 IGYYILKNNRLGRYVYATGGNIQAAKLAGINTNNIILFVYSLSGFLAAISGLIITSRLNS 240

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            +P   + +E   + ++V     + GG   +        I+  +      +N   F  L+
Sbjct: 241 AAPTAGQGAELDAIAAVVLGGTSLSGGEGGVIGTLIGALIIGILNNGLNLLNVSPFYQLI 300

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 301 AKGAVILLAIAL 312


>gi|319781411|ref|YP_004140887.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317167299|gb|ADV10837.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 321

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/276 (11%), Positives = 73/276 (26%), Gaps = 27/276 (9%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
           +  S   I ++  Q  +  + A G + V+   G + L+             ++ +     
Sbjct: 40  SFASANNIANLLRQGSMIAIMAVGQTFVI-ITGGIDLSVGAVVGFATVVVAMMINAGFPI 98

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
              ++    +                   ++     + S     +L+      N      
Sbjct: 99  WLAILVTLLVGVAIGMFHGFGIVKMGLPPFIITLATLTSLRGIGLLMTNGNSIN------ 152

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                      + S        +SF+      + V+L        +      +       
Sbjct: 153 -----------INSDTFTAFSRNSFIGIPNLFWMVILVGIPAYIFLH----HSRWGRYLF 197

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
           ++  N +A       +      A+ +S       G   AA     +P   +  E   + S
Sbjct: 198 SVGSNAEASRLSGVNVQRTIYMAYTLSGLCAAFVGVLLAARIGIGNPTQAEGWELQAIAS 257

Query: 272 IVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
            VI      G + S+        IL  +      +N
Sbjct: 258 SVIGGTSLFGAVGSVHGPLLGAFILATINNGANLLN 293


>gi|260427008|ref|ZP_05780987.1| inner-membrane translocator [Citreicella sp. SE45]
 gi|260421500|gb|EEX14751.1| inner-membrane translocator [Citreicella sp. SE45]
          Length = 255

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 74/214 (34%), Gaps = 15/214 (7%)

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           ++ +   I  K    T G        RL          I       +  +    M+ V +
Sbjct: 28  VTMVVTLIFRKLINRTAGPEYSVGDARLGGYNGIPSVPILNVPGDPAAWLDPAQMFQVFM 87

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
           G+  +    +  +  +        I +N+     L   +   ++  FA+ S   GMAGA 
Sbjct: 88  GILIVVYVFLRVIIASDFGRISVGIPENETRSSLLGYDVRRHEVIVFAIGSGIAGMAGAM 147

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +A  +     + F    +   +  V+ GG+ +L+    A  +L  +      +       
Sbjct: 148 WATCQTFTDSNAFSLEMSAKALVRVMAGGVGTLAGPILAVILLQWLSLKFGTL------- 200

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                   ++ +  +++ A+ +V+++    LL  
Sbjct: 201 --------HILNNYVILRAIMMVLVLLPKGLLPT 226


>gi|197122105|ref|YP_002134056.1| inner-membrane translocator [Anaeromyxobacter sp. K]
 gi|196171954|gb|ACG72927.1| inner-membrane translocator [Anaeromyxobacter sp. K]
          Length = 292

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 94/297 (31%), Gaps = 14/297 (4%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           + A+   +   S  +  L+Y + A+G  +   +   L+        + A+   +     G
Sbjct: 1   MPASIIAQMAISGALMGLVYALIAYGFQLTYATSKSLNFGQGELVMVSAFFS-LTLLDLG 59

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
           +  WL++P   +     G+ +    ++   +  +   ++++ I    L        G+  
Sbjct: 60  VPYWLMVPGGLVFGALLGLAVERAGVRLALEQKSEGWILLTIILGLFLFSAAENVWGRDD 119

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                 +      V             V        V +G+  + A I ++ RRT +  A
Sbjct: 120 RPFPTPISSDPIHVLG-----------VDVTPLELSVAVGVLAVMALIEVFKRRTLLGKA 168

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
           +  +  ++ A   +  +     + ++A+S     +AG   +             +  +  
Sbjct: 169 FEAVSADRDAGELMGISATRTVMLSYALSGTVAALAGILVSPITTVGPTMAS--ALVLKA 226

Query: 270 ISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
            S+ ++ G+ S   +     +L  +  L        +                   +
Sbjct: 227 FSVAVVAGLDSGFGVVLVGVLLGALESLASFYVGSGWREAPGLALLILALAVRPTGV 283


>gi|170718577|ref|YP_001783781.1| monosaccharide-transporting ATPase [Haemophilus somnus 2336]
 gi|168826706|gb|ACA32077.1| Monosaccharide-transporting ATPase [Haemophilus somnus 2336]
          Length = 318

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 89/313 (28%), Gaps = 24/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + +   L L   +    S + + S+  Q+ ++ + A G++  + + G + L+     
Sbjct: 15  MVFILIALFLALSASIDGFFSARTVWSIIEQVSMFGIIAIGVTFAIITTG-IDLSSGSMV 73

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ +     + +        L+  +  I     M                 +L       
Sbjct: 74  AMTSVVAASIVTGGDTVSSALLAFAISIVLGAAMGAI------------NGSLTAFGSIP 121

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +     +   + G  +      +  +  +           +   + +Y V++      
Sbjct: 122 PFIATLGMMIIARGGAQLYSSGRPIDASSEAFTWISDVDFFGLPGLVLVYIVIVIAS--- 178

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L R+        +  N  A            +  +  + A  G+ GA  AA   
Sbjct: 179 ---HILLSRSTFGRHVYAVGGNLNAAKICGINTTKTLIWVYVFAGALSGLVGALLAARTY 235

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +P      E   + + VI      GG+ ++        I+    +    +    +   
Sbjct: 236 AGNPSYGLSWELDAIAAAVIGGVSLSGGIGTIPMCVIGALIIGTTNKGLNMLGVDPYWQQ 295

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 296 IIKGLIIVVAVLI 308


>gi|257141449|ref|ZP_05589711.1| ribose ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 343

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 92/311 (29%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 44  VLVLLCVGFAFMTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 102

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S      WL IP +  +    G++ G      R     +    ++ +     
Sbjct: 103 A-VASLLASNIPGWGWLGIPAALAVGLVFGVVNGGLISLLRLPPFIVTLGALTAVRGIAR 161

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    +G           F        + + ++++    + A  
Sbjct: 162 L--------------------MGNDTTIFNPQLPFAFIGNGSILGVPWLVVIALAVVAIS 201

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   +L  +A S    G+     AA     +
Sbjct: 202 WFILRRTVLGMRIYSVGGNPEAARLSGINVRGIELFVYATSGLLAGLGALMSAARLYAAN 261

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 262 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLSNGLVLLGVSDIWQYII 321

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 322 KGLVIIGAVAL 332


>gi|253575163|ref|ZP_04852502.1| ABC-type ribose transport system [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251845619|gb|EES73628.1| ABC-type ribose transport system [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 397

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/362 (10%), Positives = 97/362 (26%), Gaps = 47/362 (12%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +++     +    V+  +L  L      + + + ++  Q+ +  + A G+ +V+   G +
Sbjct: 27  KMDVRAYTMVGALVLIWVLFGLLDPTFLTARNLSNLFTQMSVTSILAIGMVLVI-VAGHI 85

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+      +      I  +  GL   ++I  +       G++ G            +  
Sbjct: 86  DLSVGSIVGLTGGLAAIFSNWLGLPAIVVILATLAAGAILGLLQGWLVAYKMIPAFIVTL 145

Query: 127 LIMSEIFQNIL--------------------IKWKPITNGKAGIYVADRLYFLGTTVRSL 166
             M      ++                      +        GI     + +     R  
Sbjct: 146 GGMMVFRGTLMGVTKSMTIPVSDKVLALLGNAYFASGFGIILGILAIGLIVWSTLRKRRS 205

Query: 167 IRFFRFPSSFVIYEIF---------------------MYYVLLGMCFLSASIILWLRRTA 205
            + + F  +    ++                      + + ++ +  L+A       +T 
Sbjct: 206 RQKYGFEVAPFAVDVIKMAALSLLVVAFVLVMNAYKGIPFPIIFVIALAAIFYFLSTKTT 265

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
                  I  N +A       I    +  F +S     +A     +     +      +E
Sbjct: 266 FGRHIYAIGGNLEAARLSGINIRRKTMIVFLLSGLLASIASIVLTSRLASATITAGNMAE 325

Query: 266 NIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              + + VI     +GG  ++        ++  +      M    F   +          
Sbjct: 326 MDAIAACVIGGTSLMGGAGTVLGALIGALVMTSLDNGMSLMGLESFWQYVVKGSILVFAV 385

Query: 321 TT 322
             
Sbjct: 386 WL 387


>gi|238782769|ref|ZP_04626799.1| Autoinducer 2 import system permease protein lsrC [Yersinia
           bercovieri ATCC 43970]
 gi|238716429|gb|EEQ08411.1| Autoinducer 2 import system permease protein lsrC [Yersinia
           bercovieri ATCC 43970]
          Length = 342

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 91/302 (30%), Gaps = 27/302 (8%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           +   +LL +      S +    +     I ++ A G ++V+     + ++      + A 
Sbjct: 1   MALFVLLGVIDSNYFSMQTFTMIFSSAQILILLAIGATLVM-LTRNIDVSVGSITGLCAV 59

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
           +  +     G  + L    + ++    G   G+     R                  ++ 
Sbjct: 60  TVGM-ALNAGFGLALSCLFALLVGMVAGCFNGILVTWLRIPA---------------IVA 103

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
                    G+ +          + + ++    P  F +  I    +LL +         
Sbjct: 104 TLGTLGLYRGLMLLLTGGKWIEGLPADLKSLSTPILFSVSPIGWLIMLLILTMAGLLG-- 161

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
              +TA   ++    DN +    L       ++ AF+++     +AG  FA+    I   
Sbjct: 162 ---KTAFGRSFYATGDNLQGARQLGVRTDSIRIFAFSMNGVMAALAGIVFASQIGFIPNQ 218

Query: 260 MFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                E   + + V     +LGG  ++        +L  +  +   +    + +      
Sbjct: 219 TGSGLEMKAIAACVLGGISLLGGTGTIIGAILGAYLLTQIDSVLVLLRLPAWWNDFIAGL 278

Query: 315 SF 316
             
Sbjct: 279 VL 280


>gi|220911984|ref|YP_002487293.1| inner-membrane translocator [Arthrobacter chlorophenolicus A6]
 gi|219858862|gb|ACL39204.1| inner-membrane translocator [Arthrobacter chlorophenolicus A6]
          Length = 440

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 90/321 (28%), Gaps = 15/321 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL--------GLLSL 68
           L      L +  FL          S+ +  LI       + +V GSL        G++++
Sbjct: 111 LTVTFIVLFVAAFLIWVVGGARTPSISLAGLIAGSVTLAVPLVFGSLSGVLCERVGVVNI 170

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                   GA++  I+ +        L   +   +    ++            +    L 
Sbjct: 171 AIEGQLLGGAFTAAIVATMTQNPFIGLAAAAVAGAVVSMVLALFSIKYLVNQIIVGVVLN 230

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +        +    +   KA       L  +   V S +              ++ YV +
Sbjct: 231 VLVSGVTGFLFSTVMQEDKARYNSPPGLDIIQIPVLSEVPIIGPILFRQSLVGYLMYVAV 290

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            + ++         +T      R + ++ +A  +L   +   +     +  A  G+ G+F
Sbjct: 291 LVVWVGLF------KTRWGLRVRAVGEHPQAADTLGINVNATRFWNVTLGGAVAGIGGSF 344

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           F                  I ++ +I  G  +      A  +      L   +       
Sbjct: 345 FTLVAIDSFTKEISGGRGFIALAALIF-GRWNPIGAFFAALLFGFADNLQSIVTIIGTPV 403

Query: 309 LLKFDCSFNMRHTTLMVIALF 329
             +F        T L V  L 
Sbjct: 404 PSQFMAMLPYLVTVLAVAGLV 424


>gi|26989487|ref|NP_744912.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Pseudomonas putida KT2440]
 gi|24984357|gb|AAN68376.1|AE016470_5 branched-chain amino acid ABC transporter, permease protein,
           putative [Pseudomonas putida KT2440]
          Length = 293

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 88/305 (28%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A ++V L  R        +  
Sbjct: 8   LIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGAMVLFAALTFVSLLERGVPFWLSFLVT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A +     +I         G       +    +   I    + +               
Sbjct: 68  LATMIALALLIERAVLRPLVGRSPITLFMATLGLAYIIEGAAQALWGA------------ 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F  +       L   + L   RT I  A R + D+ +
Sbjct: 116 QVHGLELAISDAPLELGGLLLSQFDLFAAATAAALVVLLSLLFNRTRIGLALRAVADDPR 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +       +AV+     +AG  + A               +  + ++I+GG 
Sbjct: 176 AAMSVGIRLPRVWAVVWAVAGFVGLVAGLLWGARLGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+S       I+    +L            ++              +   L +L+R   
Sbjct: 233 TSISGAIVGGLIIGASEKLAEVYFGPLIGGGIENWFP---------YVLALLFLLVRPAG 283

Query: 339 LLRLR 343
           L   R
Sbjct: 284 LFGER 288


>gi|323967994|gb|EGB63406.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli M863]
 gi|327252254|gb|EGE63926.1| ribose transport system permease protein rbsC [Escherichia coli
           STEC_7v]
          Length = 332

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/317 (11%), Positives = 89/317 (28%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +     L          +  +  ++ GA    +             +ATL +    +
Sbjct: 88  AFVSVCLAFLLQ--FDVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALR 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                        +   I             + +    L M  L 
Sbjct: 146 GMGLFMTN-------------------ALPVPIDENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|238896489|ref|YP_002921227.1| sugar ABC transport system permease component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238548809|dbj|BAH65160.1| sugar ABC transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 430

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/361 (9%), Positives = 85/361 (23%), Gaps = 51/361 (14%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
              +    +V  L+         +   + ++          + G+  V+  LG + L+  
Sbjct: 57  TAPVIAGLIVISLVFTFLNPVYIAPNNLVNLLFDCATVGFISLGIVCVL-MLGEIDLSVG 115

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               + +    +L    G  +   I V+     A G++  L   +            +  
Sbjct: 116 SMSGLASAIVGVLWVNAGWPLAGAIAVALACGVAVGLVYALLYTRVGMPSFVATLAGLLA 175

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF--------- 182
           +    L    P  +           +     +             +   IF         
Sbjct: 176 LLGMQLYILGPSGSINLPYTSPLVRFGQLLVMPGWFSHLMALLPGLAILIFGLKKRSRRL 235

Query: 183 -----------------------------------MYYVLLGMCFLSASIILWLRRTAIS 207
                                              + ++          +   L+RT   
Sbjct: 236 AANLSAEGVSSLVARAIALTIIFEAAVLYLNQGRGIPWIFGLFVACVMILNYALKRTKWG 295

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
            +   +  N++A       +    +SAF + +      G   A+     S        N+
Sbjct: 296 RSMFAVGGNREAARRSGINVRAIYVSAFVLCTTLATFGGILAASRLASASQQAGTGDVNL 355

Query: 268 IVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             I+  ++      GG  S         ++  +      +N       +       +   
Sbjct: 356 NAIAAAVIGGTSLFGGRGSAWSALLGIIVIQSISNGLTLLNLPSSLRYIITGAVLAIAVI 415

Query: 322 T 322
            
Sbjct: 416 I 416


>gi|229590869|ref|YP_002872988.1| putative branched-chain amino acid transporter permease
           [Pseudomonas fluorescens SBW25]
 gi|229362735|emb|CAY49645.1| putative branched-chain amino acid transport system permease
           [Pseudomonas fluorescens SBW25]
          Length = 293

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 90/305 (29%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A ++V L  R     W  +  
Sbjct: 8   LIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGAMVLFAALTFVSLLERGFPFAWAFLLT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A +     +I  +           I  +    +   I    + +               
Sbjct: 68  LASMVVLALLIEKVVLRPLVNRPPIILFMATLGLSYLIEGFAQFLWGA------------ 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F  +       L  ++ L   +T +  + R + D+  
Sbjct: 116 QVHGLDLGIADEPLEIRGMLLSQFDLFAAGTAAVLVIALSLLFNKTRVGLSLRAVADDPL 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +       +AV+     +AG  + A               +  + ++I+GG 
Sbjct: 176 ASMAVGIRLPRIWALVWAVAGFVGLVAGLLWGARLGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S+        I+    ++          S ++              +   L +L+R   
Sbjct: 233 SSIGGAIVGGLIIGASEKIAEIYLGPIIGSGIENWVP---------YVLALLFLLVRPAG 283

Query: 339 LLRLR 343
           L   R
Sbjct: 284 LFGER 288


>gi|229160943|ref|ZP_04288932.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus R309803]
 gi|228622511|gb|EEK79348.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus R309803]
          Length = 286

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 102/305 (33%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G     L+  
Sbjct: 8   FVNGVSTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYFLALVGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 68  VAMGMLLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKIFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +    L     F    VI   +  +V++    +  +++L L++T I    R    +++
Sbjct: 116 PISAKLPLWLQGSFTFGGVILIKYRLFVIVIGILIYIALLLLLKKTKIGLMIRAGVMDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++   
Sbjct: 235 GSVQGSAIASLIVGLAGAFTAYF--------------MPDLSLAINMLMLLFFLIVKPTG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|209549627|ref|YP_002281544.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209535383|gb|ACI55318.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 326

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 98/312 (31%), Gaps = 21/312 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   + L L      S +   ++  QI +  + A G++ V+   G + L+   A A
Sbjct: 27  LVGLLALCVFLSLSTDTFLSVRNGLNILDQITVLGIMAVGMTFVILIGG-IDLSVGSALA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +         +  GL + + I  + + SG  G+I+GL   +FR                 
Sbjct: 86  LAMMVMGWTANVAGLPLPVAIAFALVASGVSGLIVGLLVTQFRVPAFIAT---------- 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  + +   G+                         F +    ++ +L  +     
Sbjct: 136 -----LAMMSAARGVANMITDGQQIVGFPDWFMMLAIDRHFGVLTATVFLMLAVVLAAWL 190

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +               +  N +        +    +  + VSS   G+AG   AA  D 
Sbjct: 191 FLHFRSE----GRMLYAVGGNPEVARLAGINVPLVTIGVYVVSSVLAGLAGIVLAARLDS 246

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           + P        +  I+ V++GG +           LIGV+ +    N     ++  F   
Sbjct: 247 VQPSS-GLGYELDTIAAVVIGGTSLSGGAGGIGGTLIGVLIIGVLRNGLNLLNVSPFLQQ 305

Query: 316 FNMRHTTLMVIA 327
             +    ++ + 
Sbjct: 306 VIIGIVIVLAVG 317


>gi|172060269|ref|YP_001807921.1| monosaccharide-transporting ATPase [Burkholderia ambifaria MC40-6]
 gi|171992786|gb|ACB63705.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MC40-6]
          Length = 333

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/318 (11%), Positives = 94/318 (29%), Gaps = 27/318 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           ++ +L ++     ++             + ++ + I    + A  ++++V   G + L+ 
Sbjct: 19  WEVLLVVILAASLVMARALSPVFLDAANLTNILLDIAEISLMALTMTLIV-VTGEIDLSV 77

Query: 71  VIAYAI-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                   A   V+      + + +++ ++            +   +     + I TL +
Sbjct: 78  ASVLGASSALMGVLWHLGLPMPVVIVLVLAGGALAGFFNGWVIVRFELPSLAVTIGTLAL 137

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 +L+  + I +  A            T +                        + 
Sbjct: 138 FRGLAYVLLGDQAIADFPAAYTSFGMNTVGATFIPEP--------------------FVI 177

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +    + L+ TA   +   I  N +A       +   KL  F +S     +AG  +
Sbjct: 178 VIVAAVLFTVLLQATAFGRSLYAIGSNHQAAAFSGIDVKKTKLKLFVLSGVMSAIAGIVY 237

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
                    D  +  E  ++ +++     I GG  SL  +  +  I+  +      ++  
Sbjct: 238 TLRFTSARGDNGEGFELAVIAAVLFGGVSIFGGRGSLYGVLLSLLIVGVLKNALTLVDVS 297

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +            
Sbjct: 298 SETLTIVTGVLLLSSVLI 315


>gi|32474002|ref|NP_866996.1| ribose transport system permease protein RbsC [Rhodopirellula
           baltica SH 1]
 gi|32444539|emb|CAD74538.1| ribose transport system permease protein RbsC [Rhodopirellula
           baltica SH 1]
          Length = 326

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 98/303 (32%), Gaps = 26/303 (8%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           +  +          + S+  Q+        G+++V+   G + L+     A+ +    +L
Sbjct: 35  IFSMLSNNFFQISTVISIANQVPDLTFLVVGMTLVLIIGG-IDLSVGSLLAVSSAVLGVL 93

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            + Y  SIW+ +PV+ +++   G + G  S+        I + I++     I      + 
Sbjct: 94  MANYDWSIWMALPVALLVASIGGGLNGAISIG-----FGIPSFIVTLGMLEIARGATKVV 148

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                IY+  R+ + G  +  +     F  +     +   ++                RT
Sbjct: 149 TDSQAIYIGSRIEWFGQPLPGVFVSPAFMFAIATVVLGQLFL---------------TRT 193

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                   I  N +A            ++ FA+S    G+AG    +      P+     
Sbjct: 194 VWGRYCIAIGTNAEAVRMSGIRSAPLCIAIFAISGMMCGLAGLAQTSRLSTADPNAAIGI 253

Query: 265 ENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           E   + + VI     +GG  ++ +      I+  +      +     +  +       + 
Sbjct: 254 ELAAIAACVIGGTSLMGGRGNVVRSFIGVLIIQVLQTGLAQVGVSDASKQIITGVVIVVA 313

Query: 320 HTT 322
              
Sbjct: 314 VLI 316


>gi|157162021|ref|YP_001459339.1| putative sugar ABC transporter, permease protein [Escherichia coli
           HS]
 gi|188495378|ref|ZP_03002648.1| putative sugar ABC transporter, permease protein [Escherichia coli
           53638]
 gi|300820783|ref|ZP_07100933.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 119-7]
 gi|300904276|ref|ZP_07122135.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 84-1]
 gi|331669294|ref|ZP_08370142.1| putative ABC transporter permease protein YphD [Escherichia coli
           TA271]
 gi|331678539|ref|ZP_08379214.1| putative ABC transporter permease protein YphD [Escherichia coli
           H591]
 gi|157067701|gb|ABV06956.1| putative sugar ABC transporter, permease protein [Escherichia coli
           HS]
 gi|188490577|gb|EDU65680.1| putative sugar ABC transporter, permease protein [Escherichia coli
           53638]
 gi|300403809|gb|EFJ87347.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 84-1]
 gi|300526536|gb|EFK47605.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 119-7]
 gi|315256568|gb|EFU36536.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 85-1]
 gi|323941192|gb|EGB37377.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli E482]
 gi|324020001|gb|EGB89220.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 117-3]
 gi|331064488|gb|EGI36399.1| putative ABC transporter permease protein YphD [Escherichia coli
           TA271]
 gi|331074999|gb|EGI46319.1| putative ABC transporter permease protein YphD [Escherichia coli
           H591]
          Length = 332

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/317 (11%), Positives = 89/317 (28%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +     L          +  +  ++ GA    +             +ATL +    +
Sbjct: 88  AFVSVCLAFLLQ--FEVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALR 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                        +   I             + +    L M  L 
Sbjct: 146 GMGLFMTN-------------------ALPVPIDENEVLDWLGGQFLGVPVSALIMIVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|167921333|ref|ZP_02508424.1| ABC transporter permease protein [Burkholderia pseudomallei BCC215]
          Length = 320

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 92/311 (29%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 21  VLVLLCVGFGFMTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 79

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S      WL IP +  +  A G++ G      R     +    ++ +     
Sbjct: 80  A-VASLLASNLPGWGWLGIPAALAVGLAFGVVNGGLISFLRLPPFIVTLGALTAVRGIAR 138

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    +G           F        + + ++++    + A  
Sbjct: 139 L--------------------MGNDTTIFNPQLPFAFIGNGSILGVPWLVVIALAVVAIS 178

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +      +  N +A       +   +L  +A S    G+     AA     +
Sbjct: 179 WFILRRTVLGMRIYAVGGNPEAARLSGINVRGIELFVYASSGLLAGLGALMSAARLYAAN 238

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 239 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLSNGLVLLGVSDIWQYII 298

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 299 KGLVIIGAVAL 309


>gi|330951897|gb|EGH52157.1| inner-membrane translocator [Pseudomonas syringae Cit 7]
          Length = 325

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/274 (13%), Positives = 71/274 (25%), Gaps = 26/274 (9%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL------------ 84
            +   +  + L     A G+ ++ G  G+LSL   I + +G+Y   +             
Sbjct: 52  DFRLGLAGKYLSLAFCAVGMVMIWGYGGILSLGQGIFFGLGSYMMAMYLKLEATATDEAA 111

Query: 85  ----GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKW 140
                         +I  S              +       +  A L     +     + 
Sbjct: 112 SALAAFYGSALPDFMIWNSVEALPWWWKPFESATFTLAAILILPALLAFLFSYAYFKKRV 171

Query: 141 KPITNG----------KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
             +                I            +      F            +Y +   +
Sbjct: 172 GGVYFSIITLSLASIMSIMIIGQQGYTGGVNGLTDFKTAFGLSLQTPQTPWILYLITTLL 231

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              S ++  ++ R+ +      IRD +             K   FAV++    + G  F 
Sbjct: 232 LLASVAMCGFILRSRLGKVIVAIRDREDRVRFSGYNTALFKAFIFAVAALISALGGVMFT 291

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                 SP +     +  ++    LGG  SL   
Sbjct: 292 LQVGLASPSLVGIIPSTEIVIYAALGGRLSLVGA 325


>gi|297182990|gb|ADI19137.1| ribose/xylose/arabinose/galactoside ABC-type transport systems,
           permease components [uncultured alpha proteobacterium
           HF0070_34E11]
          Length = 351

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 90/291 (30%), Gaps = 13/291 (4%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILI-----YVMFAWGLSIVVGSLGLLS 67
            +  L  +V   +    +  T S  + + +GIQ  +       + A G S+++   G   
Sbjct: 23  SVFGLAIIVLTFMSLTTVSGTFSAMWTNPIGIQAWVELAAFVGILAIGASLLM-IAGEFD 81

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+  +S+ +L +     +  ++     ++    ++  +      G    I TL
Sbjct: 82  LSMGANIALAGHSFALLLTFGVPVLPAILITFIELAFLGFIMGTIVV--RTGLPSFIVTL 139

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                 +   +        ++ + V   L                 +    + +     +
Sbjct: 140 GFWFASRGFAVFLSQTLVNQSRLSVKPYLKPPAGGGEDPTLIDNIFAFDKAFGLPFDAEV 199

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                L       L RT   N       + +A  ++   +   K+S F +S+    + G 
Sbjct: 200 YYFAILVIITAFMLHRTRFGNWIYASGGDAQAARAVGVPVNRVKISLFMISTCLACLLGV 259

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIG 293
               +     P    F E   + + VI     +GG  S+        I   
Sbjct: 260 LTVMTSGASDPKAGDFRELHAIAAAVIGGCALMGGYGSVIGAVLGAFIFAI 310


>gi|74313071|ref|YP_311490.1| putative transport system permease [Shigella sonnei Ss046]
 gi|209920024|ref|YP_002294108.1| putative ABC transporter permease [Escherichia coli SE11]
 gi|218555070|ref|YP_002387983.1| putative sugar ABC transporter membrane protein [Escherichia coli
           IAI1]
 gi|218706049|ref|YP_002413568.1| putative sugar ABC transporter membrane protein [Escherichia coli
           UMN026]
 gi|291283771|ref|YP_003500589.1| putative transport system permease protein [Escherichia coli O55:H7
           str. CB9615]
 gi|293405987|ref|ZP_06649979.1| sugar ABC transport system [Escherichia coli FVEC1412]
 gi|293415814|ref|ZP_06658457.1| simple sugar transport system permease [Escherichia coli B185]
 gi|293446900|ref|ZP_06663322.1| simple sugar transport system permease [Escherichia coli B088]
 gi|298381787|ref|ZP_06991386.1| simple sugar transport system permease [Escherichia coli FVEC1302]
 gi|300898343|ref|ZP_07116691.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 198-1]
 gi|301024829|ref|ZP_07188466.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 69-1]
 gi|331664111|ref|ZP_08365021.1| putative ABC transporter permease protein YphD [Escherichia coli
           TA143]
 gi|331673999|ref|ZP_08374762.1| putative ABC transporter permease protein YphD [Escherichia coli
           TA280]
 gi|331684195|ref|ZP_08384791.1| putative ABC transporter permease protein YphD [Escherichia coli
           H299]
 gi|73856548|gb|AAZ89255.1| putative transport system permease protein [Shigella sonnei Ss046]
 gi|209763094|gb|ACI79859.1| putative transport system permease protein [Escherichia coli]
 gi|209913283|dbj|BAG78357.1| putative ABC transporter permease component [Escherichia coli SE11]
 gi|218361838|emb|CAQ99438.1| putative sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli IAI1]
 gi|218433146|emb|CAR14042.1| putative sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli UMN026]
 gi|284922496|emb|CBG35583.1| ABC transporter, permease protein [Escherichia coli 042]
 gi|290763644|gb|ADD57605.1| Putative transport system permease protein [Escherichia coli O55:H7
           str. CB9615]
 gi|291323730|gb|EFE63158.1| simple sugar transport system permease [Escherichia coli B088]
 gi|291428195|gb|EFF01222.1| sugar ABC transport system [Escherichia coli FVEC1412]
 gi|291433462|gb|EFF06441.1| simple sugar transport system permease [Escherichia coli B185]
 gi|298279229|gb|EFI20743.1| simple sugar transport system permease [Escherichia coli FVEC1302]
 gi|300358005|gb|EFJ73875.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 198-1]
 gi|300396360|gb|EFJ79898.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 69-1]
 gi|320657228|gb|EFX25037.1| putative sugar transporter subunit [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|323170177|gb|EFZ55830.1| ribose transport system permease protein rbsC [Escherichia coli
           LT-68]
 gi|331059910|gb|EGI31887.1| putative ABC transporter permease protein YphD [Escherichia coli
           TA143]
 gi|331069272|gb|EGI40664.1| putative ABC transporter permease protein YphD [Escherichia coli
           TA280]
 gi|331079147|gb|EGI50349.1| putative ABC transporter permease protein YphD [Escherichia coli
           H299]
          Length = 332

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/317 (11%), Positives = 89/317 (28%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +     L          +  +  ++ GA    +             +ATL +    +
Sbjct: 88  AFVSVCLAFLLQ--FEVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALR 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                        +   I             + +    L M  L 
Sbjct: 146 GMGLFMTN-------------------ALPVPIDENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|52142549|ref|YP_084281.1| sugar ABC transporter, permease [Bacillus cereus E33L]
 gi|51976018|gb|AAU17568.1| sugar ABC transporter, permease [Bacillus cereus E33L]
          Length = 338

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/331 (13%), Positives = 102/331 (30%), Gaps = 33/331 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +++ +L +L ++  +L  L      +   +       L   + A  ++ V+   G + ++
Sbjct: 15  RWEGVLIVLLLIEFILFSLINSDFLNISNLLFSTNDFLFIAIAAIPMTFVI-VTGGIDVS 73

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 + +    +L       ++ +I    +   A  +   +  +      +     + 
Sbjct: 74  VGSIMGLTSILIGVLWMNGISILFAVIISLIISCLAGALNGLIIKMTDVEPLVVTLGTMF 133

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 ++I      +G  GI                     F        I +  +L  
Sbjct: 134 LNGGIALVISGGAGASGYEGISGLP---------------DAFVQLASGSFIGIPNLLWL 178

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+    +   RT      +    N+ A            + A+ +S    G+ G F 
Sbjct: 179 LIVLTVLCAVLFHRTIYGRHVKLTGANENAAKYTGIKTKKVVIIAYMLSGLGGGLGGTFL 238

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            A       DM   +   I+ ++V     I GG  S+     A+  +  +          
Sbjct: 239 TAYFGSARADMGSETILPIITAVVLGGTLITGGKGSIIGTVLASIFIGLMQ--------- 289

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
                L+     N +   ++ I L L ++MR
Sbjct: 290 ---YGLQMTGLTNEQSNVVIGIILILSVIMR 317


>gi|30018925|ref|NP_830556.1| methylthioribose ABC transporter permease [Bacillus cereus ATCC
           14579]
 gi|29894467|gb|AAP07757.1| Methylthioribose transport system permease protein [Bacillus cereus
           ATCC 14579]
          Length = 331

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/320 (10%), Positives = 89/320 (27%), Gaps = 18/320 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y      + +   +   +   +  +   I  +   I I  + A G++  +   G   L+ 
Sbjct: 20  YQFSTIAIIIGVTIFFSIVNDSFLTYNNISDILRSISIVTLLAIGVTFTLIVDG-FDLSV 78

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               ++   +       Y   + + + V  +     G++  L  ++ +   L        
Sbjct: 79  GSTASLATIAAASCLVLYRQELLVTLLVPILCGLLVGLLNALLVIRIKLPDLLAT----- 133

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                  +    I NG    +      + G +  +      F        + +   ++ M
Sbjct: 134 -------LSIMYIVNGLHLTFSKGSSIYEGMSGATGHFIPSFLFIGQGSVLGIPVPVIIM 186

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +     L+L +T     +     N++A           ++ A+ +S     + G    
Sbjct: 187 LTVVLIAHLFLEKTTYGRFFYMTGGNREAARLAGIPTDRYRVYAYMISGLLASIGGIILC 246

Query: 251 ASRDRISPDMFKFSENIIVISI----VILGGMT-SLSKIAKATAILIGVVELCCGMNFYY 305
           +                 V +      + G    ++      + ++  ++     MN  Y
Sbjct: 247 SRVGTGQVSAGAPLLMDAVAAAYIGYAMFGAKKPNIVGTFLGSVLIGIILNGLTMMNVPY 306

Query: 306 FNSLLKFDCSFNMRHTTLMV 325
           +   +              +
Sbjct: 307 YAQDIIKGSILITALAFSFI 326


>gi|146295452|ref|YP_001179223.1| monosaccharide-transporting ATPase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409028|gb|ABP66032.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 323

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 91/301 (30%), Gaps = 27/301 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
            + ++ +  V+  +L  +F+    S   I ++   + I  +   G++ V+ ++G + ++ 
Sbjct: 15  KNLVIYITMVIMIILFSIFVPGFLSLDGIITLLTTMAIVCILGIGVTFVL-TVGEIDIST 73

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               ++ +    +L          L+           +                     +
Sbjct: 74  GALMSVPSVVVAVLLKNGVSLFIALMLALLSALLIGYL---------------------N 112

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +    +     IT              +       +      S F    + +  ++L M
Sbjct: 113 GVVTTKIGIPSFITTLGTSGIAMGLSRIISGNTPVSVEDKFILSLFGKDLLGLPKIILWM 172

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             L+      L +T        + DN++A +     +    + AF V S ++  AG    
Sbjct: 173 ILLTIIGYFLLHKTRFGRNLHCVGDNREAAYLYGINVKRTIILAFVVCSIYVFFAGMLMI 232

Query: 251 ASRDRISPDMFKFSENIIVISIVILG-----GMTSLSKIAKATAILIGVVELCCGMNFYY 305
                 +P   +      +++ VI G     G  S+         L  V      + F  
Sbjct: 233 GKTSFATPGEGESLVLDAIVAPVIGGTSIRGGKGSIIGTFIGALFLAIVSSGLFYLAFPS 292

Query: 306 F 306
           +
Sbjct: 293 W 293


>gi|328958555|ref|YP_004375941.1| galactoside transport system permease protein MglC [Carnobacterium
           sp. 17-4]
 gi|328674879|gb|AEB30925.1| galactoside transport system permease protein MglC [Carnobacterium
           sp. 17-4]
          Length = 339

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 88/313 (28%), Gaps = 6/313 (1%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++     L++ +   +  S + I ++  Q    ++ A G + ++   G   L+     
Sbjct: 19  LYMVLGALMLVVIIMEPSFISLQNITNILGQASTRIIMALGAAGLIILKG-TDLSAGRIL 77

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     L      +  +   + A+      +      + F          +    F 
Sbjct: 78  GLCAVVASSLAQSTTYASRMYPNLPALPLIVPLLAAIAVGMTFGAINGFGVAKLKVHAFI 137

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L                            +       ++  I  + + YV+     +S
Sbjct: 138 ITLGTQLIAYGLSCIYIDRPPNGAQPIGSLDVRYTNLVRNTVDIGPVKLPYVIFYAAIIS 197

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +     +T +      I  N +A       I+   +  F +S    G+AG   AA   
Sbjct: 198 VIMWFVWNKTKLGKNMYAIGGNTEAAEVSGVNIVKNIMIIFIISGVLYGVAGFLEAARIG 257

Query: 255 RISPDMFKFSENIIVISIVILGGMT-----SLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + +     +   + + VI G        ++  +     IL  +      +    +   
Sbjct: 258 STTSNTGLNYDLDAISASVIGGVSFSGGVGTIPGVIMGAVILQFINYGLTFVGVSPYLQY 317

Query: 310 LKFDCSFNMRHTT 322
           +       +  + 
Sbjct: 318 IIKGLIIILAVSI 330


>gi|167588056|ref|ZP_02380444.1| hypothetical protein BuboB_22096 [Burkholderia ubonensis Bu]
          Length = 260

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 80/228 (35%), Gaps = 22/228 (9%)

Query: 113 PSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRF 172
            +L+      ++ATL  +E  +  L   +    G  G  V          +R +      
Sbjct: 9   LTLRLHALGFSLATLAAAETVRQALAVVRVQRPGADGEPVGPNGAEGFAGIRYVFEHGMT 68

Query: 173 PSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKL 232
           P    +    +  ++L         ++ L RT    A R   ++     +L   +   KL
Sbjct: 69  PGDVALVVWSVLALVLAG-------LVVLERTRFGRALRMTGEDPALAGALGIDVRRTKL 121

Query: 233 SAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILI 292
            A A++     + GA +A     + PD F     I  +S  ++GG+ +        A+ +
Sbjct: 122 GAAALAGGIAALGGALYAHCNTYVEPDNFDVMLGIHGLSYALIGGLGAPLGAFAGVAVDL 181

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           G++E     + Y                  +    + +++++R   L+
Sbjct: 182 GLLEGSRLFHGY---------------RMIVFGGLVAVILVVRPRGLI 214


>gi|91779501|ref|YP_554709.1| ABC sugar transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91692161|gb|ABE35359.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia xenovorans LB400]
          Length = 347

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/319 (12%), Positives = 88/319 (27%), Gaps = 27/319 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +    L  ++V       +      S   + ++ +     ++ A+G  +V+  LG L L+
Sbjct: 32  RTAIALFAISVALIAASRVLGPNFGSLAQMKAILVISSFLMVVAFGQQMVI-LLGGLDLS 90

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +G             ++   +P    I+ A G   G+     +           
Sbjct: 91  VASMMTLGGVLAFKWIGGPDSNVVWGVPAILAITAALGACSGIGVSLVKIPP-------F 143

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                  +I +        G         L     S                    +L  
Sbjct: 144 IMTLAMGVILYGVTLGFTQGTPTGQPSAALSALFASTAAGVP--------------ILYL 189

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           M    A       RT+       +  N  A +     +    ++ +A+S A  G+AG   
Sbjct: 190 MVAAIAVGCFLQMRTSFGRKLYALGTNPTAAYVAGLPVHRLTIATYAISGASAGLAGILM 249

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
                 ++  + +      V ++V     I+GG       A    +L  +  +   +   
Sbjct: 250 LGYVRGVTLTLGQSYLLPSVAAVVIGGTSIVGGRGIYLGAAAGAILLTTLSTIVSSLGIA 309

Query: 305 YFNSLLKFDCSFNMRHTTL 323
                + +     +    L
Sbjct: 310 EGWRTIIYGAVIFVALVLL 328


>gi|21220873|ref|NP_626652.1| sugar transport permease [Streptomyces coelicolor A3(2)]
 gi|256787973|ref|ZP_05526404.1| sugar transport permease [Streptomyces lividans TK24]
 gi|289771860|ref|ZP_06531238.1| sugar transport permease [Streptomyces lividans TK24]
 gi|6562807|emb|CAB62738.1| putative sugar transport permease [Streptomyces coelicolor A3(2)]
 gi|289702059|gb|EFD69488.1| sugar transport permease [Streptomyces lividans TK24]
          Length = 414

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/350 (12%), Positives = 92/350 (26%), Gaps = 55/350 (15%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +   +L  L ++  L      G     + + ++ +Q    ++ A G+ +V+   G +
Sbjct: 36  RNMRQYGMLMALGLIVVLFAVWSDGDLLLPRNVSNLVLQNSYILILAIGMMLVI-IAGHI 94

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI-- 124
            L+     A    +  +L   + L   + + +   I  A G + G            +  
Sbjct: 95  DLSVGSLTAFVGATAAVLMVNHDLPWPVAVILCLAIGAAAGAVQGFFIAYLGIPSFIVTL 154

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           A +++      I +K + +      +      +       +          F +    +Y
Sbjct: 155 AGMLLFRGLTEIFLKGQTLGPFPKDLQKIANGFLPEVGPNTNYHNLTLLLGFALIAFVVY 214

Query: 185 -----------------------------------------------YVLLGMCFLSASI 197
                                                           VLL +  L    
Sbjct: 215 QEVRDRKRQLEFSLDVPPLKLFLLKLVALVAAVLVVTLLLASYKGAPIVLLILGVLVVGF 274

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +R   I      I  N  A               F        +AG  FAA  +  S
Sbjct: 275 GYLMRNAIIGRHIYAIGGNLPAAKLSGVKDKKVTFLVFLNMGMLAALAGLVFAARFNAAS 334

Query: 258 PDMFKFSENIIVIS-----IVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           P      E   + +       + GG+ ++        +L  +      + 
Sbjct: 335 PKAGLNFELEAIAASFIGGASMSGGVGTVLGAIIGGLVLGVLNNGMNLVG 384


>gi|298246327|ref|ZP_06970133.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963]
 gi|297553808|gb|EFH87673.1| inner-membrane translocator [Ktedonobacter racemifer DSM 44963]
          Length = 459

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 80/289 (27%), Gaps = 13/289 (4%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           LF G+    + +    +++   ++    ++I     GL ++      A+GA +  I+   
Sbjct: 71  LFQGSFGDPQSLSYTLVRVGPLILTGLSVAIAY-RAGLFNIGAAGQLAVGAMTAGIIAYT 129

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG- 146
           +     +++    ++       +    +     +     ++ + +   I           
Sbjct: 130 FPTLPGIVLVPLMLLGSIVAGGIWGGIVGLLKAWRGAHEVVTTIMLNWIAFYVTDYLISG 189

Query: 147 -----KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV----LLGMCFLSASI 197
                                  +                   Y+    LL    +    
Sbjct: 190 PYKAPHQATQTPSLPTQAQLPFLATTYNNTLGQFLPQITNPEQYLTDVGLLIALVVLIFY 249

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
                RTA     R I  N +A                A+S AF G+AGA     +    
Sbjct: 250 WFLTSRTAFGYEIRVIGQNPRAAQYAGIRTKRNMFLVMALSGAFSGLAGAIHLMGQPPYQ 309

Query: 258 PDMFKFSENIIVI--SIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
                F+ +        V L G T+   I  +  +  G+ +    M  +
Sbjct: 310 LFGSTFAIDPTGFDAIGVSLLGRTTGVGILLSALLFGGLRQGGTTMQLF 358


>gi|323525925|ref|YP_004228078.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
 gi|323382927|gb|ADX55018.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
          Length = 368

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 80/274 (29%), Gaps = 11/274 (4%)

Query: 6   LRLNKYD-KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
           +RL +        L VV  L++            +  +        +FA G ++VV + G
Sbjct: 48  MRLARNPEWFTVALIVVTCLIVGAINPRFFQFATLFDLLHSATTMSLFALG-TLVVLASG 106

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + ++     AI A +   +                +++GA G ++           L  
Sbjct: 107 GIDVS---FTAIAALTMYGITKAVFAWWPDAPFALILVTGALGGVVLGVVNGLLVHRLKA 163

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            +LI++   Q +         G                +             V+    + 
Sbjct: 164 PSLIVTIGTQYLYRGLLLTFIGTTFFMNIPHSMDHFGRIPLFFYHTADGLRAVLPASVLA 223

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            V   +            RT +      +  +      L   +    L  F  +    G+
Sbjct: 224 LVAAALVTWWLL-----NRTMMGRGVYAMGGSLAIAERLGYNLRAIHLFVFGYTGMLAGI 278

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           AG    ++    +P        + VI+ VILGG 
Sbjct: 279 AGILHVSNNRLANPFDL-VGSELDVIAAVILGGA 311


>gi|297155682|gb|ADI05394.1| ABC transporter permease [Streptomyces bingchenggensis BCW-1]
          Length = 330

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 92/297 (30%), Gaps = 27/297 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           ++D  + +L V   +          S+  +      I    + A  ++++V   G + L+
Sbjct: 9   RWDTAVGVLLVAVFVTGLGTTDGFASRDNLAFAFNDIAEVALMALPMTLLV-VAGQVDLS 67

Query: 70  CVIAYAIG-AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                 +  A +  +  S +     + + +   ++G       +  +      + I TL 
Sbjct: 68  VASMLGLSSALTGQLWDSGWAFETIVPVVLLVGVAGGLLNGWLVTKVGLPSLAVTIGTLA 127

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +     ++++    IT+                             +  I   F+ Y + 
Sbjct: 128 LYRGLASVVLGSNAITDFP------------------ETYAKWAVDTTTIPGTFITYPMA 169

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
               L+    + L  T +  +   I   + A +     +   KL  F V+      AG  
Sbjct: 170 LFIVLAVVAAVVLHATGLGRSLFAIGAQEDAAYFAGIRVKRIKLLLFVVTGLVSAFAGVV 229

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCC 299
           F                 ++VI+ V+LGG+       +L        ++  +  L  
Sbjct: 230 FTLRYGSA-RADNGSGFEMLVIASVLLGGIDFDGGKGTLFGAVAGVLLIGILKNLLT 285


>gi|229096478|ref|ZP_04227449.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus Rock3-29]
 gi|229102569|ref|ZP_04233273.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus Rock3-28]
 gi|229115451|ref|ZP_04244857.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus Rock1-3]
 gi|228667864|gb|EEL23300.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus Rock1-3]
 gi|228680796|gb|EEL34969.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus Rock3-28]
 gi|228686684|gb|EEL40591.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus Rock3-29]
          Length = 286

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 104/305 (34%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  +  L+  
Sbjct: 8   FVNGVSTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYVLALVGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 68  VAMGMLLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKIFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +    +     +    VI   +  +V+L    +  +++L L++T I    R    +++
Sbjct: 116 PISAKLPIWLQGSYTFGGVILIKYRLFVILVGILIYIALLLLLKKTKIGLMIRAGVMDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G  FA     +  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINVKAIFSFVFLLGAGMAALGGFLFAPYSGVVFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++   
Sbjct: 235 GSVQGSAIASLIVGLAGAFTAYF--------------MPDLSLAINMLMLLFFLIVKPTG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|225571351|ref|ZP_03780347.1| hypothetical protein CLOHYLEM_07449 [Clostridium hylemonae DSM
           15053]
 gi|225159827|gb|EEG72446.1| hypothetical protein CLOHYLEM_07449 [Clostridium hylemonae DSM
           15053]
          Length = 321

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/332 (10%), Positives = 92/332 (27%), Gaps = 38/332 (11%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             K    + L+ V+  L+  LF     S   + ++  Q +   + A G++ V+   G + 
Sbjct: 8   FMKSQGSVFLILVLMCLVASLFTDKFFSPSNLSNVLAQSVTCGISALGMTFVI-LTGGID 66

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+        A   +   +   + +   + +   +    GM  G+     +         
Sbjct: 67  LSVGGCIVFTATIGMKFLAEGTVGVETAVLMMLGLGILVGMFNGILITVLKMPSFIATL- 125

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                               +    A    ++      +     +    +   + +   +
Sbjct: 126 -------------------ASSSVTAGLALYISMGKTIIGLPIEYSVIGLKKVMGLPICV 166

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             M  L     + LR T           N+K+ +     +   + S + ++     + G 
Sbjct: 167 WLMFALYILSYVILRYTGYGRKVYATGSNRKSAWLSGINVRLVEFSVYVINGLMSALVGI 226

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
              +     +  +    E   + ++VI      GG   ++       IL  +        
Sbjct: 227 VLTSKLLSSTSTIGNGMEVNSIAAVVIGGASMTGGEGGVAGTIVGALILTIISNAM---- 282

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
                               +M + + + +L 
Sbjct: 283 --------NLMSVNAYLQEVVMGLIIIIALLF 306


>gi|170692037|ref|ZP_02883201.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
 gi|170143321|gb|EDT11485.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
          Length = 337

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 83/288 (28%), Gaps = 12/288 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               +   +   L      +   + ++  +     + A G++ V+   G + L+     A
Sbjct: 27  FAGLIALCIAGTLLNRDFATLDNMMNVLTRTSFIGIIAVGMTFVI-ISGGIDLSVGSMAA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + A S + L +     +        +I         +    F   +  + T    E F  
Sbjct: 86  LIAGSMIWLMNGLAAGVGGHTFPPLVIVTLGIAFALVLGGLFGCAHGLLITKGRIEPFIV 145

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L            +     L    +        +      V   I+++ V        A
Sbjct: 146 TLGTLGIFRAVLTWLADGGALTLDNSLSDLYGPVYYASLFGVPVPIWVFLVTA------A 199

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              L L RTA     + I  N++        +   K+  + +    +G+A   +      
Sbjct: 200 GGALILNRTAFGRHVQAIGSNEQVARYAAIRVDTVKIVTYVLLGICVGVATVLYVPRLGS 259

Query: 256 ISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELC 298
            +P      E   + S+V+      GG   +        +L  +  + 
Sbjct: 260 ATPTTGLLWELEAIASVVVGGTALKGGEGRVVGTVVGAILLSVIANIL 307


>gi|163849165|ref|YP_001637209.1| inner-membrane translocator [Chloroflexus aurantiacus J-10-fl]
 gi|222527142|ref|YP_002571613.1| inner-membrane translocator [Chloroflexus sp. Y-400-fl]
 gi|163670454|gb|ABY36820.1| inner-membrane translocator [Chloroflexus aurantiacus J-10-fl]
 gi|222451021|gb|ACM55287.1| inner-membrane translocator [Chloroflexus sp. Y-400-fl]
          Length = 491

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 52/188 (27%), Gaps = 4/188 (2%)

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                               +  +  +++     +   I L LRRT +    R    + +
Sbjct: 306 PNLIAWLRDNCASIDVLGRPFPSYRIFIIALGIAMFIGIALLLRRTRLGMIIRAGVQDGE 365

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       FA+ +    + G   A                +     V++GGM
Sbjct: 366 MVQALGINVRRVFTLVFALGAGLAALGGVAAAPFLGI--SPGLGQEFQLQAFIAVVIGGM 423

Query: 279 TSLSKIAKATAILIGVVELC--CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
            S +  A    ++           +       + +             V+ + LV+L+R 
Sbjct: 424 GSFTGAAMGALLVGLARAFGDQIVLTGIQLPWMSEAITFSPSIARASTVLIMALVLLLRP 483

Query: 337 HSLLRLRT 344
             L   + 
Sbjct: 484 AGLFGKKE 491


>gi|110597477|ref|ZP_01385764.1| inner-membrane translocator [Chlorobium ferrooxidans DSM 13031]
 gi|110341021|gb|EAT59492.1| inner-membrane translocator [Chlorobium ferrooxidans DSM 13031]
          Length = 289

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 78/235 (33%), Gaps = 10/235 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +   +Y +   G+S+V G + + +        +G Y      +   +  +L + +
Sbjct: 7   LVSGILSGGVYALAGIGMSLVFGVMNISNFAHGDLMMLGMYLAYFAFTLLHIDPYLALLL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +S   G I+    +    D+     ++++     I+     +               
Sbjct: 67  IIPVSFLFGFILEKVFIHRVIDHPHQNQILLTIGLGLIMSNTALL----------AFTSD 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 +        +S +   + +    +    ++A + L+L +++   A R    N++
Sbjct: 117 PKILTTTYSSSAINTASGLSISVPLLLSFVITSVITAVLYLFLAKSSTGMALRATSQNRE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
           A   +   +      AF + +A    AGA  A +          F      I ++
Sbjct: 177 AAQLMGINVAKMSAIAFGIGTALAATAGALIAPTYYIHPLAGHSFLLKSFTICVL 231


>gi|90417877|ref|ZP_01225789.1| permease protein, branched-chain amino acid ABC transporter
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90337549|gb|EAS51200.1| permease protein, branched-chain amino acid ABC transporter
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 337

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/336 (13%), Positives = 103/336 (30%), Gaps = 42/336 (12%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA-------------------- 78
           I +   +   Y + A GL+++ G+LG+++      + +GA                    
Sbjct: 8   ILNGLDKGGAYALIALGLTLIFGTLGVVNFAHGALFMLGAFCAVAFSMVLSISERVRDES 67

Query: 79  -----------YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
                      Y  +  G      +   +P+S +++    +++GL   +    +    + 
Sbjct: 68  VTFFEAYKEVPYLEIWFGETGRTILDWSVPLSILLAIPFMLLVGLAMERGLIRFFYKRSH 127

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               +    L                  +        S      F  + + Y ++     
Sbjct: 128 AEQILVTFGLAIVLQEIVKHYFGANPIPMTAPPAFAGSADVGQWFGIAGLSYPMWRIVYF 187

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    +  ++  +L+ T      R    +++    L   I       F +++   G+AG 
Sbjct: 188 LFSLAIIGAVFAFLQLTTFGMVVRAGMADRETVGLLGINIGRKFSIVFGLAAVVAGLAGV 247

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +             F     V+ +V    M SL     A  +L  +           F+
Sbjct: 248 MYTPILSPNYHLGMDFLVLSFVVVVVGG--MGSLGGAVVAGFLLGILQS---------FS 296

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
           S+ +           ++ +   +V+L+R   L+  +
Sbjct: 297 SMTEIKAIVPGIDQIIIYLVAVVVLLVRPRGLMGRK 332


>gi|323188340|gb|EFZ73632.1| ribose transport system permease protein rbsC [Escherichia coli
           RN587/1]
          Length = 332

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/317 (11%), Positives = 89/317 (28%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPTV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +     L          +  +  ++ GA    +             +ATL +    +
Sbjct: 88  AFVSVCLAFLLQ--FEVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALR 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                        +   I             + +    L M  L 
Sbjct: 146 GMGLFMTN-------------------ALPVPIDENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|145640477|ref|ZP_01796061.1| ribose ABC transporter permease protein [Haemophilus influenzae
           R3021]
 gi|145275063|gb|EDK14925.1| ribose ABC transporter permease protein [Haemophilus influenzae
           22.4-21]
          Length = 271

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 80/261 (30%), Gaps = 19/261 (7%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           + +      S   I ++  Q  +  + A G++ V+   G + L+     A+       + 
Sbjct: 30  VSMINPDFFSVDNILNILRQTSVNAIIAVGMTFVILIAG-IDLSVGSVLALTGAIAASMV 88

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           S       ++  V  + +   G+   + +                + F   L+    +  
Sbjct: 89  SIELPIFLVIPVVLLIGTLLGGISGVIVAK------------GKVQAFIATLVTMTLLRG 136

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                     +    +    L     F S    Y + +   +  M  + A     L+ T 
Sbjct: 137 ITMVYTDGRPITTGFSDNADL-----FASIGTGYVLGIPVPIWIMSIVFAVAWYILKHTP 191

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           I      +  N+ A       +   K+  FAVS     +AG    +      P     S 
Sbjct: 192 IGRYIYALGGNEAATQLSGINVNKIKVFVFAVSGFLSALAGLIVTSRLSSAQPTA-GVSY 250

Query: 266 NIIVISIVILGGMTSLSKIAK 286
            +  I+ V++GG + +     
Sbjct: 251 ELDAIAAVVVGGTSLMGGKVV 271


>gi|297623231|ref|YP_003704665.1| inner-membrane translocator [Truepera radiovictrix DSM 17093]
 gi|297164411|gb|ADI14122.1| inner-membrane translocator [Truepera radiovictrix DSM 17093]
          Length = 322

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 97/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + +V  +L  L      +   + ++  Q  I ++ A G++ V+   G + L+     
Sbjct: 23  ILPVLLVICVLFALLTPNFLTANNLLNVVRQASINIVLAAGMTFVI-LTGGIDLSVGSI- 80

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +GA +   +                +++G    +     + + G    I TL      +
Sbjct: 81  -LGATAVAGVLVSLVPEWSWAAVPVTLLAGLAMGLFNGALVAYVGLPAFIVTLGSYTGLR 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +                             +     F      Y   + ++++    + 
Sbjct: 140 GLAYLLAN-------------------GTTVINNNLPFAWIGNAYLGPLPWLVVIALAVV 180

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     LRRT +      +  N +A       +    L  +  S    G+ G   AA   
Sbjct: 181 AMSWFILRRTVLGVHIYAVGGNLQAARLTGIKVGLVLLFVYGFSGLMSGLGGVMSAARLY 240

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++ +  E   + ++++     +GG+ ++        I+  +      MN  +F  L
Sbjct: 241 SANGNLGQGYELDAIAAVILGGTSFVGGVGTIIGTLFGALIIAVLNNGLTLMNVSFFWQL 300

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 301 VVKGLVIIVAVII 313


>gi|326781066|ref|ZP_08240331.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|326661399|gb|EGE46245.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 325

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 85/291 (29%), Gaps = 30/291 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +        L   LF     +   + +  +Q+   V+ A G+++V+G+ G + L+     
Sbjct: 29  VYAAVAAVLLFNALFTEHFMTADNLRTQLVQVAPIVIVALGMALVIGTEG-IDLSVGSTM 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +      +   L+  ++  + GA                     L+     Q
Sbjct: 88  ALAAALLPLYLGYGLVPALLIALLAGAVVGAVNGT-----------------LVSLVGLQ 130

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+        G            +       I      +      + +  V+L    L+
Sbjct: 131 PIVATLALFVGG------RGLALVMADGRLKQIVNPDILALGTGSFLGIPTVVLIAGVLA 184

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++   ++RT        I  N+ A       +    +  + +      +AG    A   
Sbjct: 185 LAVAFLVQRTTFGRQIVAIGGNRSASALSGLPVKRVLIGVYVLCGVMAALAGILATARLT 244

Query: 255 RISPDMFKFSENIIVISIVILGGM----TSL--SKIAKATAILIGVVELCC 299
              P        +  I+ V++GG      S+          ++  +     
Sbjct: 245 ASDPSSLGTLMELSAITAVVVGGTPLNGGSIRVLGTVAGALLMQLLRATLV 295


>gi|162148440|ref|YP_001602901.1| ribose transport system permease rbsC [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161787017|emb|CAP56602.1| putative ribose transport system permease protein rbsC
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 307

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 96/306 (31%), Gaps = 11/306 (3%)

Query: 22  YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSY 81
             ++  L   A  S     ++ +Q         G + V+   G + L+     A+     
Sbjct: 1   MIVIFALTSRAFFSVDNGLTVALQTTQIAYLGIGATCVI-ITGGIDLSVGSVLALSGVVA 59

Query: 82  VILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWK 141
            +                 +++G     +    + +      IATL M  + + + ++  
Sbjct: 60  ALAVKAGVPVPL--GFAIGILTGGACGAINGIIITWMKLPPFIATLGMMMVARGVALQ-- 115

Query: 142 PITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWL 201
            IT  +    + D    LG      I          +  + + Y ++ M  L+  + + L
Sbjct: 116 -ITGARPVSGLGDAFGVLGNGALFRIVRDGSDGFPNVVFVGIPYPVILMVVLAVVVAIML 174

Query: 202 RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF 261
            R  I      +  + +A       +   K+ A+ +S    G+AG    +      P+  
Sbjct: 175 GRMPIGRHAYAVGSSSEAARLSGVNVARVKMVAYGMSGLLAGLAGCVLMSRLVTAQPNEG 234

Query: 262 KFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
             +E   + S VI     +GG+ ++S       ++  +          YF   +      
Sbjct: 235 IAAEMDAIASAVIGGTSLMGGVGTISGTMIGAFVIGILRNGLNMNGVSYFIQQIVIGLVI 294

Query: 317 NMRHTT 322
                 
Sbjct: 295 IGTVWI 300


>gi|56420443|ref|YP_147761.1| L-arabinose ABC transporter permease [Geobacillus kaustophilus
           HTA426]
 gi|56380285|dbj|BAD76193.1| L-arabinose ABC transporter (permease) [Geobacillus kaustophilus
           HTA426]
          Length = 407

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/350 (11%), Positives = 99/350 (28%), Gaps = 55/350 (15%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  L ++  L   L  G       I ++ +Q    ++ A G+ +V+   G + L+
Sbjct: 33  RSYSMVIALILIMLLFQVLTGGILLRPLNITNLILQNSYILVLAVGMMLVI-ITGHIDLS 91

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD--------- 120
                A       IL  ++ +S+WL + +  ++    G   G      +           
Sbjct: 92  VGSVAAFVGALAGILMVQHHVSVWLTVLICLLLGALIGAWQGFWVAYVKIPSFIVTLAGM 151

Query: 121 ----------------------------------------YLAIATLIMSEIFQNILIKW 140
                                                   +L    +  +     ++++W
Sbjct: 152 LLFRGLTMVILEGQSIAPFPKTFQNMSSGFLPDVFHGGEIHLFTIVIGFAASLLFVVLEW 211

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           +   + K   +           +  +       +  +     +  +L+ +  L  +    
Sbjct: 212 RKRNSQKKYGFAVTPASMFTLKLAVIAAVIMIFTYILATYEGIPTILVILAALIIAYSFV 271

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             RT +      I  N+KA               F        ++G  FAA  +  +P  
Sbjct: 272 ANRTVVGRHIYAIGGNEKAAQLSGIKTKRVTFWVFVNMGVLAALSGLIFAARLNAATPKA 331

Query: 261 FKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
               E   + +  I      GG+ ++S       ++  +      +    
Sbjct: 332 GNLFELDAIAACFIGGASAYGGIGTISGAIIGGLVMGVMNNGMSLLGLGI 381


>gi|320011060|gb|ADW05910.1| inner-membrane translocator [Streptomyces flavogriseus ATCC 33331]
          Length = 295

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 82/287 (28%), Gaps = 5/287 (1%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +Y + A GLS++ G + +L+       +IGAY      S             
Sbjct: 9   MTGLGLGALYFLVASGLSLIFGLMDVLNFAHGALLSIGAYGTWWAASGRLPGAGPGGWGF 68

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           A+       +  L ++             +    +  ++    +      +         
Sbjct: 69  ALAVLFGTAVGTLAAVVLEL----AVVRPLYTRPREQVLATVGVGLAVPALLSGVWGSDA 124

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
            T          F        +    ++     +  ++ L+L RT      R   +++  
Sbjct: 125 RTFPGPEALSGTFALLGADVPVNRLVLVAAAVVVLVALRLFLGRTRHGLVVRAGVEDRAM 184

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +L   +  A    FA+      + GA        + P     S  I    +V+ GGM 
Sbjct: 185 VTALGIDVRKAFTLVFAIGGCAAALGGALGGLYFGSVDPRQ-GTSLLIFAFVVVVTGGMG 243

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           S++  A A  ++  V +            L        +       +
Sbjct: 244 SVTGAAVAAVVIGLVQQFANYYTAAGLGDLAVVVLLAALLLVRPRGL 290


>gi|315426797|dbj|BAJ48420.1| branched-chain amino acid ABC transporter permease [Candidatus
           Caldiarchaeum subterraneum]
 gi|315426810|dbj|BAJ48432.1| branched-chain amino acid ABC transporter permease [Candidatus
           Caldiarchaeum subterraneum]
          Length = 288

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 87/300 (29%), Gaps = 29/300 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I  L+Y +FA G S++ G   ++     + Y   AY    L + Y +   +    +   
Sbjct: 15  FITSLVYALFAEGFSLIFGVARMIDAAYGMWYTAAAYMAFALVTVYNIPSLVTFFATVAA 74

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
             A G I     L+   +++ +             +     TN                 
Sbjct: 75  LFAAGFIYYWAVLRRIKEHIEMIMTTFLIALVIQNLIVLLFTNFPWSTPAVFPGSTPVFG 134

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           V    +      +     I ++ ++               RT +  A R++  +  A   
Sbjct: 135 VSVFNQQLAAAVAASALLILLWLLI--------------YRTKVGLAIRSVAQDVDAAVC 180

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +             +S+A  G+A              +  +    +  +IV+LGG+    
Sbjct: 181 VGIRPERTMALVLGLSTALAGLASLLVTPQSTI--TPVLGWPMLTLAFAIVVLGGLGDYR 238

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A  ++  V      +    ++                  IA+ L + +R   +   
Sbjct: 239 GTLLAAFVIGYVEITVQNLVSPLYSGAASL-------------IAVLLTLWLRPKGIFGR 285


>gi|296280689|gb|ADH04632.1| unknown [Sorangium cellulosum]
          Length = 344

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 49/327 (14%), Positives = 103/327 (31%), Gaps = 6/327 (1%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R N+   +   L + +  L  L      S   +     +  + V  A   ++ V   G 
Sbjct: 1   MRQNQGLLVAVGLCIFFYGLYSLSHPKGFSASLVGQNANESFVLVAAAMAQTVPV-LTGG 59

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           L L+      +       + +   L  +L I +   +  A G++ G   +  R   +   
Sbjct: 60  LDLSVGAVITLVNCVASHVLAGGALENFLGILLCLAVGMAAGLLNGCLVVYGRLQPIIAT 119

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
               +      L           G       + L   +++        +   + +I    
Sbjct: 120 LASGTIFMGVALFLRPTPGGQVDGDLAFAATFDLDELLQAAGAAPLDGALGFVGKIPSPA 179

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + + +    A +  + RRT        +  +Q+A +     I   KL+A+ +S  F  + 
Sbjct: 180 IWMALL---ALLWAYYRRTRYGLGAYAVGASQEAAYMSGVRIQRVKLAAYTLSGFFASVG 236

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATA--ILIGVVELCCGMNF 303
           G + A      + D+ +     +     ++ G TSL          +   +V      NF
Sbjct: 237 GLYLALQTMSGNADIPQAGSYTLNSIASVVIGGTSLYGGIGGALGSLFGALVLRSVAFNF 296

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFL 330
             F+         N  +  L    + L
Sbjct: 297 RVFDEGSTLGLLANPLYQPLFEGLILL 323


>gi|167826632|ref|ZP_02458103.1| ABC transporter permease protein [Burkholderia pseudomallei 9]
          Length = 321

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 92/311 (29%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 22  VLVLLCVGFGFMTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 80

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S      WL IP +  +  A G++ G      R     +    ++ +     
Sbjct: 81  A-VASLLASNLPGWGWLGIPAALAVGLAFGVVNGGLISFLRLPPFIVTLGALTAVRGIAR 139

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    +G           F        + + ++++    + A  
Sbjct: 140 L--------------------MGNDTTIFNPQLPFAFIGNGSILGVPWLVVIALAVVAVS 179

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +      +  N +A       +   +L  +A S    G+     AA     +
Sbjct: 180 WFILRRTVLGMRIYAVGGNPEAARLSGINVRGIELFVYASSGLLAGLGALMSAARLYAAN 239

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 240 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLSNGLVLLGVSDIWQYII 299

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 300 KGLVIIGAVAL 310


>gi|160900252|ref|YP_001565834.1| inner-membrane translocator [Delftia acidovorans SPH-1]
 gi|160365836|gb|ABX37449.1| inner-membrane translocator [Delftia acidovorans SPH-1]
          Length = 290

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/305 (9%), Positives = 75/305 (24%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY   A  L ++  +   ++           +    L        W  +  
Sbjct: 8   LLAGLATGGIYATVALALVMIYQATHHINFAQGEMAMFSTFIAWALLQAGLPYWWAFLAT 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+       +                 ++   +          I       + +     
Sbjct: 68  VALSFVLGAAVEFAIIRPMHKAADLAQVVVFIGLLIVFHSLAGWIFGYTIKEFPSPFPAD 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                              +        +     + A +  + R T +  A R    N  
Sbjct: 128 AW-------------YGSALMSAHEVGTIFVALAIVALLFAFFRLTPLGLAMRAAAQNPA 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           +   +  ++    +  + ++ A   +AG   A         M          +  +LGG+
Sbjct: 175 SSRLVGISVGRMLMLGWGLAGAIGAVAGMMVAPVVFLDPHMMSGVLLY--AFAGALLGGI 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +       I+  +  L                        ++ ++ +  V+++R   
Sbjct: 233 DSPAGAVLGGFIVGVLENLVGSYVVG------------TELKLSVALVLIVGVLIVRPAG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LMGRK 285


>gi|15803071|ref|NP_289102.1| putative transport system permease protein [Escherichia coli
           O157:H7 EDL933]
 gi|15832666|ref|NP_311439.1| transport system permease protein [Escherichia coli O157:H7 str.
           Sakai]
 gi|168748389|ref|ZP_02773411.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|168757797|ref|ZP_02782804.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|168761162|ref|ZP_02786169.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|168768645|ref|ZP_02793652.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|168773533|ref|ZP_02798540.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|168778518|ref|ZP_02803525.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|168787898|ref|ZP_02812905.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC869]
 gi|168798923|ref|ZP_02823930.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC508]
 gi|195936692|ref|ZP_03082074.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. EC4024]
 gi|208806948|ref|ZP_03249285.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208812059|ref|ZP_03253388.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208819773|ref|ZP_03260093.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209399954|ref|YP_002272019.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|217327558|ref|ZP_03443641.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|254794495|ref|YP_003079332.1| putative sugar ABC transporter membrane protein [Escherichia coli
           O157:H7 str. TW14359]
 gi|261223019|ref|ZP_05937300.1| predicted sugar transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261259430|ref|ZP_05951963.1| predicted sugar transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK966]
 gi|12516953|gb|AAG57660.1|AE005484_10 putative transport system permease protein [Escherichia coli
           O157:H7 str. EDL933]
 gi|13362883|dbj|BAB36835.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|187770579|gb|EDU34423.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|188017116|gb|EDU55238.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|189003444|gb|EDU72430.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|189355276|gb|EDU73695.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|189362287|gb|EDU80706.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|189368423|gb|EDU86839.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|189372317|gb|EDU90733.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC869]
 gi|189378550|gb|EDU96966.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC508]
 gi|208726749|gb|EDZ76350.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208733336|gb|EDZ82023.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208739896|gb|EDZ87578.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209161354|gb|ACI38787.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|209763088|gb|ACI79856.1| putative transport system permease protein [Escherichia coli]
 gi|209763090|gb|ACI79857.1| putative transport system permease protein [Escherichia coli]
 gi|209763092|gb|ACI79858.1| putative transport system permease protein [Escherichia coli]
 gi|209763096|gb|ACI79860.1| putative transport system permease protein [Escherichia coli]
 gi|217319925|gb|EEC28350.1| putative sugar ABC transporter, permease protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|254593895|gb|ACT73256.1| predicted sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|320188886|gb|EFW63545.1| putative sugar ABC transport system, permease protein YphD
           [Escherichia coli O157:H7 str. EC1212]
 gi|320640895|gb|EFX10383.1| putative sugar transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           G5101]
 gi|320646337|gb|EFX15264.1| putative sugar transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli O157:H- str.
           493-89]
 gi|320651517|gb|EFX19904.1| putative sugar transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli O157:H- str. H
           2687]
 gi|320667638|gb|EFX34553.1| putative sugar transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326340351|gb|EGD64155.1| putative sugar ABC transport system, permease protein YphD
           [Escherichia coli O157:H7 str. 1125]
 gi|326345035|gb|EGD68779.1| putative sugar ABC transport system, permease protein YphD
           [Escherichia coli O157:H7 str. 1044]
          Length = 332

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/317 (11%), Positives = 89/317 (28%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +     L          +  +  ++ GA    +             +ATL +    +
Sbjct: 88  AFVSVCLAFLLQ--FEVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALR 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                        +   I             + +    L M  L 
Sbjct: 146 GMGLFMTN-------------------ALPVPIDENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|222087785|ref|YP_002546323.1| sugar ABC transporter [Agrobacterium radiobacter K84]
 gi|221725233|gb|ACM28389.1| sugar ABC transporter [Agrobacterium radiobacter K84]
          Length = 341

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/319 (14%), Positives = 93/319 (29%), Gaps = 26/319 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSM------GIQILIYVMFAWGLSIVVGSLGLLSL 68
           + L+ +   LL  +       Q ++ ++       +Q+ +  + + G++ V+   G   L
Sbjct: 27  IFLVLIGIALLCEILGWIFVGQSFLLNLQRLKIMILQVSVIGIISVGVTQVI-ITGGNDL 85

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +      + A                              +  +P     G  L I    
Sbjct: 86  SSGSVVGLTAMVAASFAQSSTWG-----------RALYPSLTDMPFFVPIGIGLLIGLAA 134

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                Q +     P      G+ V+ R      T    I       +F+   I+   V L
Sbjct: 135 GYINGQLVTRMKIPPFIATLGMMVSARGLSKLYTKGQPISGLTDQFNFIGSGIWPVIVFL 194

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +      ++ + R    +     I  N +A       +    +  +A++    G+AG  
Sbjct: 195 VVAIAFHIVLRYTRYGKFTY---AIGANVQAARVSGINVEAHLVKVYAIAGLLAGLAGII 251

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            AA        M    E   + + VI      GG+  +S     T IL  ++     +N 
Sbjct: 252 TAARVQTAQAGMGVTYELDAIAAAVIGGTSLTGGVGRISGTVIGTVILGVMISGFTFLNV 311

Query: 304 YYFNSLLKFDCSFNMRHTT 322
             +   +            
Sbjct: 312 DAYYQEIAKGVIIITAVAV 330


>gi|195940785|ref|ZP_03086167.1| branched-chain amino acid transporter permease subunit LivH
           [Escherichia coli O157:H7 str. EC4024]
          Length = 143

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 49/151 (32%), Gaps = 14/151 (9%)

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
               ++ L++R + +  A R   ++ K    L           F + +A   +AG     
Sbjct: 1   MAMLALTLFIRYSRMGRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQ 60

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               I+P    F   +   +  +LGG+ S+        IL     L        +  ++ 
Sbjct: 61  FYGVINPY-IGFMAGMKAFTAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVS 119

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           F               L LV+L+    +L  
Sbjct: 120 F-------------ALLILVLLVMPTGILGR 137


>gi|167568118|ref|ZP_02361034.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia oklahomensis EO147]
          Length = 292

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/287 (12%), Positives = 81/287 (28%), Gaps = 14/287 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S      +Y +   GL ++  + G+L+       A+GAY                 
Sbjct: 8   PYLISGLGVGAVYALSGVGLVVLYRASGVLNFAFGATGALGAYVAAACLDAGYPQTLAWA 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A  + A  +   + + +       +   + +  F  IL+ +     G     +    
Sbjct: 68  AAIAASTAASLVYGLVLAPRLAAR-DRVVRSVATLGFALILLGFCEWYWGDTPRRLVLPT 126

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                    +   +       +    M  + + +            RT +    R + +N
Sbjct: 127 DSEALDFGDVRFTYTRIVGLALAFAMMAAIGVVLA-----------RTRLGLQMRALSNN 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +     L   ++   ++A+ +S  F G+ G   A                I   +  I+G
Sbjct: 176 RHLSGLLGIRVLRVDVAAWVISGVFAGITGLLLANLVRL--QAAVLTFLVIPAFAAAIVG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            + SL     A   +     L   +  +             +    +
Sbjct: 234 RLASLPATVAAGIAIGLAEALAITVPGFAQYRSATPFLIALVAMLFI 280


>gi|91791095|ref|YP_552045.1| inner-membrane translocator [Polaromonas sp. JS666]
 gi|91700976|gb|ABE47147.1| inner-membrane translocator [Polaromonas sp. JS666]
          Length = 295

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 106/303 (34%), Gaps = 24/303 (7%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +  +  L+Y + A G+ I+  S  + +L       +GAY  + + +  G+S+W  IP++
Sbjct: 11  INGALSGLMYSLVAMGIVIIYKSSSVPNLAQGAMTMLGAYVVLAIANGLGVSMWAAIPLA 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                  GM +   +L+       I  L+M+      +        G  G  ++  +   
Sbjct: 71  MGTMFFLGMGIERVALRRLAGRPIIMILMMTLGLDIFIRATAMAIWGGGGSTLSIGISDE 130

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +  L+    +    V+       ++         +             R I D+  A
Sbjct: 131 PLFLGPLLLNRAYVVGAVVAVALFLVLMFFFQTRRGIV------------LRAISDDYIA 178

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
            +S+  ++      ++A+SS     AG  + + +     +       +  +++ +LGG+ 
Sbjct: 179 SWSIGISVERGVAFSWAMSSVLATTAGVLWGSVQ---GVNQGLALLLLKGLTVAVLGGLD 235

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S+     A  +L  +  +  G                      ++   L L IL+R H L
Sbjct: 236 SIGGAILAGLLLGLLEGVASGYLDPLLGGG---------SRDLVVAATLILTILIRPHGL 286

Query: 340 LRL 342
              
Sbjct: 287 FGR 289


>gi|237740760|ref|ZP_04571241.1| galactoside transport system permease mglC [Fusobacterium sp.
           2_1_31]
 gi|229422777|gb|EEO37824.1| galactoside transport system permease mglC [Fusobacterium sp.
           2_1_31]
          Length = 339

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/310 (11%), Positives = 87/310 (28%), Gaps = 8/310 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+     + + +      S +   ++  Q  +  + A G++ ++ + G   L+     
Sbjct: 21  LYLVLFCMLIAIIIKEPTFLSLRNFKNILTQSSVRTIIALGVAGLIVTQG-TDLSAGRQV 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     L             +         +I+ L  +        +   +    F 
Sbjct: 80  GLSAVISGTLLQSMTNVNKAFPKLGEFSIFTTILIVVLVGVIIASINGIVVATLNVHPFI 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +     +    +  Y       +   V    +F +       Y I    +   +  L 
Sbjct: 140 ATMGTMTIVYGINSLYYDKAGAAPISGFVDKYSKFAQGYIQIGSYTIPYLIIYAAIATLI 199

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I+    +T        +  N +A       ++   +  +A+S A+    G   A    
Sbjct: 200 MWILWN--KTKFGKNVFAVGGNPEAAKVSGVNVVLTLIGIYALSGAYYAFGGFLEAGRIG 257

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + + VI      GG+  +S +     IL  +           +   
Sbjct: 258 SATNNLGFMYEMDAIAACVIGGVSFYGGVGRISGVITGVIILTIINYGLTYTGVSPYWQY 317

Query: 310 LKFDCSFNMR 319
           +         
Sbjct: 318 IIKGIIIVTA 327


>gi|170019171|ref|YP_001724125.1| monosaccharide-transporting ATPase [Escherichia coli ATCC 8739]
 gi|312973210|ref|ZP_07787382.1| ribose transport system permease protein rbsC [Escherichia coli
           1827-70]
 gi|169754099|gb|ACA76798.1| Monosaccharide-transporting ATPase [Escherichia coli ATCC 8739]
 gi|310331805|gb|EFP99040.1| ribose transport system permease protein rbsC [Escherichia coli
           1827-70]
 gi|323977271|gb|EGB72357.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli TW10509]
          Length = 332

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/317 (11%), Positives = 89/317 (28%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +     L          +  +  ++ GA    +             +ATL +    +
Sbjct: 88  AFVSVCLAFLLQ--FEVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALR 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                        +   I             + +    L M  L 
Sbjct: 146 GMGLFMTN-------------------ALPVPIDENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|53717688|ref|YP_106674.1| putative branched-chain amino acid transport system permease
           [Burkholderia pseudomallei K96243]
 gi|53723880|ref|YP_104193.1| branched-chain amino acid ABC transporter permease [Burkholderia
           mallei ATCC 23344]
 gi|67641549|ref|ZP_00440325.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4]
 gi|121599112|ref|YP_994568.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia mallei SAVP1]
 gi|124385019|ref|YP_001027816.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia mallei NCTC 10229]
 gi|126448818|ref|YP_001082236.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia mallei NCTC 10247]
 gi|167001640|ref|ZP_02267434.1| ABC transporter, permease protein [Burkholderia mallei PRL-20]
 gi|167736463|ref|ZP_02409237.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 14]
 gi|167822081|ref|ZP_02453552.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 9]
 gi|167892166|ref|ZP_02479568.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei 7894]
 gi|167900677|ref|ZP_02487882.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei NCTC 13177]
 gi|167916936|ref|ZP_02504027.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia pseudomallei BCC215]
 gi|226193036|ref|ZP_03788646.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|254175016|ref|ZP_04881677.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia mallei ATCC 10399]
 gi|254184118|ref|ZP_04890709.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655]
 gi|254194605|ref|ZP_04901036.1| ABC transporter, permease protein [Burkholderia pseudomallei S13]
 gi|254201263|ref|ZP_04907627.1| ABC transporter, permease protein [Burkholderia mallei FMH]
 gi|254206604|ref|ZP_04912955.1| ABC transporter, permease protein [Burkholderia mallei JHU]
 gi|254261149|ref|ZP_04952203.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a]
 gi|254357335|ref|ZP_04973609.1| ABC transporter, permease protein [Burkholderia mallei 2002721280]
 gi|52208102|emb|CAH34032.1| putative branched-chain amino acid transport system permease
           protein [Burkholderia pseudomallei K96243]
 gi|52427303|gb|AAU47896.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Burkholderia mallei ATCC 23344]
 gi|121227922|gb|ABM50440.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia mallei SAVP1]
 gi|124293039|gb|ABN02308.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia mallei NCTC 10229]
 gi|126241688|gb|ABO04781.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia mallei NCTC 10247]
 gi|147747157|gb|EDK54233.1| ABC transporter, permease protein [Burkholderia mallei FMH]
 gi|147752146|gb|EDK59212.1| ABC transporter, permease protein [Burkholderia mallei JHU]
 gi|148026399|gb|EDK84484.1| ABC transporter, permease protein [Burkholderia mallei 2002721280]
 gi|160696061|gb|EDP86031.1| putative branched-chain amino acid ABC transporter, permease
           protein [Burkholderia mallei ATCC 10399]
 gi|169651355|gb|EDS84048.1| ABC transporter, permease protein [Burkholderia pseudomallei S13]
 gi|184214650|gb|EDU11693.1| ABC transporter, permease protein [Burkholderia pseudomallei 1655]
 gi|225934636|gb|EEH30613.1| ABC transporter, permease protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|238522499|gb|EEP85943.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4]
 gi|243062651|gb|EES44837.1| ABC transporter, permease protein [Burkholderia mallei PRL-20]
 gi|254219838|gb|EET09222.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710a]
          Length = 292

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 81/287 (28%), Gaps = 14/287 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S      +Y +   GL ++  + G+L+       A+GAY                 
Sbjct: 8   PYLISGLGVGAVYALSGVGLVVLYRASGVLNFAFGATGALGAYVAAACLDADYPQALAWG 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A  + A  +   + + +       +   + +  F  +L+ +     G     +    
Sbjct: 68  AAVAASTAASLVYGLVLAPRLAARE-RVVRSVATLGFALVLLGFCEWYWGDTPRRLVLPT 126

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                    +   +       +    M  + + +            RT +    R + ++
Sbjct: 127 DSEALDFGDVRFTYTRIVGLALACAMMAAIGVVLA-----------RTRLGLHMRALSND 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +     L   ++    +A+A+S  F G+ G   A                I   +  I+G
Sbjct: 176 RHLSGVLGIRVLSVDAAAWAISGVFAGITGLLLANLVRL--QAAVLTFLVIPAFAAAIVG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            + SL     A   +     L   +  +             +    +
Sbjct: 234 RLASLPATVAAGVAIGLAEALAITVPGFAPYRSATPFLIALVAMLFI 280


>gi|99079956|ref|YP_612110.1| inner-membrane translocator [Ruegeria sp. TM1040]
 gi|99036236|gb|ABF62848.1| inner-membrane translocator [Ruegeria sp. TM1040]
          Length = 328

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/324 (11%), Positives = 102/324 (31%), Gaps = 33/324 (10%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV----------------- 82
            +  +  ++Y + A G  ++  + G+ +    +     A + V                 
Sbjct: 13  LNGLMAGVLYALVALGFVLIYKASGIFNYAQGVMALFAAMTLVGIMQGQVPFSHLINAVF 72

Query: 83  ---ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              I    + +  ++ I ++  +      ++ +  +K       I   + +      L  
Sbjct: 73  GGHITHFGWTVPSFVAIMMTVAVMVLLAWLVQVLVMKHLVGQEPIILFMATIGLAYFLEG 132

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +  G     +   L            F  F   F I  + +   ++    ++  ++L
Sbjct: 133 VADLMWGSEIKTLDVGLPQGINLWIDETTFGIFGYGFFIDNLDIVATVIAALLVT-GLVL 191

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           + + T    A R + D+ +A  S+  ++ +  +  ++V+     +AG  +          
Sbjct: 192 FSQYTKQGRAMRAVADDHQAALSVGISLNYIWVLVWSVAGFVALVAGIMWGTKSGVQFSL 251

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                  +  + +++LGG TS+        I+    +L   +         +   +    
Sbjct: 252 S---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFLIGPMVGGATENWFA---- 304

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
                 +   + ++ R   L   +
Sbjct: 305 -----YVLALIFLVFRPQGLFGEK 323


>gi|315187060|gb|EFU20817.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Spirochaeta thermophila DSM 6578]
          Length = 334

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/327 (11%), Positives = 99/327 (30%), Gaps = 25/327 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L +++ IL +L +   ++  +        + + +         + A  +++V+   G + 
Sbjct: 14  LQRWEVILSILLLTIMVVNGILSPYFWDVRNLFNTTFNFTEKSIIALSMALVI-ITGSID 72

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++     A+ ++   ++ S       +++    ++    GM+ G      R   +A+   
Sbjct: 73  ISVGSIVALSSFCMGLVASYGAPVPVIVLV-GLLVGTVAGMLNGFLVGYLRIPAIAVTI- 130

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                               +      +         +    F +     +    + + L
Sbjct: 131 -----------------GTMSFFRGIPQGILGDKAFTTYPEEFAWLGQGYVGGTLVPFQL 173

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +    L+  + L L  T        +  N+ A           K + F ++  F G++  
Sbjct: 174 VVFLALALVVGLVLHYTIFGRMVYAVGRNEVAAVFSGIPAKRVKFAVFTLNGLFSGISSV 233

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
              +      P++ +  E   +   V     I GG   +  +  A+ ++  +      MN
Sbjct: 234 LLTSRILSTRPNIAQGFELEAITIAVLGGVAITGGFGGIPGVVIASFVIGFIRFGMGLMN 293

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALF 329
                  L       +       IA  
Sbjct: 294 VPGRVMNLVTGALLIVAIVIPEFIAFM 320


>gi|114707583|ref|ZP_01440479.1| ribose ABC transporter (permease) [Fulvimarina pelagi HTCC2506]
 gi|114537142|gb|EAU40270.1| ribose ABC transporter (permease) [Fulvimarina pelagi HTCC2506]
          Length = 316

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/327 (14%), Positives = 96/327 (29%), Gaps = 26/327 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M++ +  L +++ IL +L V+   L+        +   + +    +    + A  ++ V+
Sbjct: 1   MAVMTRILIRHETILAILFVIALFLMAAQSDRFLTTANLLNQARLMTEVGLIAIPMTFVI 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
              G + L+      + A    +     GL +   + +S +   A G+  G+   +FR  
Sbjct: 61  -VTGGIDLSVGSIMGLCAILVGVFWQNAGLPLPAAVGLSLVAGTAAGLANGIIITRFRVP 119

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
            L              L           GI  A  +         L +            
Sbjct: 120 PLIAT-----------LATLALYRGLAEGISQARSVRGYPEWFAQLGQGQILGIPTQ--- 165

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
                 L     ++ + I  LR T        I +N+ A       +   KL  +  S  
Sbjct: 166 ------LWLFALVAIAGIFILRFTTFGRTTYAIGNNEAAAEFSGLPVERTKLLIYTASGF 219

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVV 295
              +A   F +       DM    E  ++ ++V     I GG   +        ++  + 
Sbjct: 220 ISALAAIVFVSRVSTTRSDMGNGIELEVITAVVLGGTSIFGGRGMVIGTLIGLCLMQILQ 279

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                       + +       +    
Sbjct: 280 NGLSLAGVRGDGTTVVIGAILIVAVLI 306


>gi|91211870|ref|YP_541856.1| ABC transporter permease [Escherichia coli UTI89]
 gi|110642707|ref|YP_670437.1| ABC transporter permease [Escherichia coli 536]
 gi|117624768|ref|YP_853681.1| ABC-type sugar transport system permease component YphD
           [Escherichia coli APEC O1]
 gi|170680743|ref|YP_001744735.1| putative sugar ABC transporter permease [Escherichia coli SMS-3-5]
 gi|191172626|ref|ZP_03034165.1| putative sugar ABC transporter, permease protein [Escherichia coli
           F11]
 gi|215487890|ref|YP_002330321.1| predicted sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O127:H6 str. E2348/69]
 gi|218559466|ref|YP_002392379.1| sugar transporter subunit: membrane component of ABC superfamily
           [Escherichia coli S88]
 gi|218690661|ref|YP_002398873.1| putative sugar ABC transporter membrane protein [Escherichia coli
           ED1a]
 gi|218701058|ref|YP_002408687.1| putative sugar ABC transporter membrane protein [Escherichia coli
           IAI39]
 gi|237705053|ref|ZP_04535534.1| ABC-type sugar transport system permease component YphD
           [Escherichia sp. 3_2_53FAA]
 gi|300974187|ref|ZP_07172505.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 200-1]
 gi|312965460|ref|ZP_07779692.1| ribose transport system permease protein rbsC [Escherichia coli
           2362-75]
 gi|331648238|ref|ZP_08349328.1| putative ABC transporter permease protein YphD [Escherichia coli
           M605]
 gi|331658688|ref|ZP_08359632.1| putative ABC transporter permease protein YphD [Escherichia coli
           TA206]
 gi|91073444|gb|ABE08325.1| hypothetical ABC transporter permease protein yphD [Escherichia
           coli UTI89]
 gi|110344299|gb|ABG70536.1| hypothetical ABC transporter permease protein YphD [Escherichia
           coli 536]
 gi|115513892|gb|ABJ01967.1| ABC-type sugar transport system permease component YphD
           [Escherichia coli APEC O1]
 gi|170518461|gb|ACB16639.1| putative sugar ABC transporter, permease protein [Escherichia coli
           SMS-3-5]
 gi|190907099|gb|EDV66699.1| putative sugar ABC transporter, permease protein [Escherichia coli
           F11]
 gi|215265962|emb|CAS10371.1| predicted sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O127:H6 str. E2348/69]
 gi|218366235|emb|CAR03982.1| putative sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|218371044|emb|CAR18871.1| putative sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli IAI39]
 gi|218428225|emb|CAR09001.1| putative sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli ED1a]
 gi|226901419|gb|EEH87678.1| ABC-type sugar transport system permease component YphD
           [Escherichia sp. 3_2_53FAA]
 gi|294490312|gb|ADE89068.1| putative sugar ABC transporter, permease protein [Escherichia coli
           IHE3034]
 gi|300308926|gb|EFJ63446.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 200-1]
 gi|307625906|gb|ADN70210.1| putative sugar transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli UM146]
 gi|312289880|gb|EFR17768.1| ribose transport system permease protein rbsC [Escherichia coli
           2362-75]
 gi|315288020|gb|EFU47422.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 110-3]
 gi|315300531|gb|EFU59760.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 16-3]
 gi|320196382|gb|EFW71006.1| putative sugar ABC transport system, permease protein YphD
           [Escherichia coli WV_060327]
 gi|323949200|gb|EGB45091.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H252]
 gi|323955781|gb|EGB51539.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H263]
 gi|324013589|gb|EGB82808.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 60-1]
 gi|330912316|gb|EGH40826.1| putative sugar ABC transport system, permease protein YphD
           [Escherichia coli AA86]
 gi|331043098|gb|EGI15238.1| putative ABC transporter permease protein YphD [Escherichia coli
           M605]
 gi|331054353|gb|EGI26380.1| putative ABC transporter permease protein YphD [Escherichia coli
           TA206]
          Length = 332

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/317 (11%), Positives = 89/317 (28%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +     L          +  +  ++ GA    +             +ATL +    +
Sbjct: 88  AFVSVCLAFLLQ--FDVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALR 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                        +   I             + +    L M  L 
Sbjct: 146 GMGLFMTN-------------------ALPVPINENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|332528990|ref|ZP_08404956.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
 gi|332041540|gb|EGI77900.1| inner-membrane translocator [Hylemonella gracilis ATCC 19624]
          Length = 285

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 92/297 (30%), Gaps = 27/297 (9%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           ++  + A GLSI +G +  ++L       +G Y+  ++ ++ GL     +  + +++   
Sbjct: 13  MLLFLMAVGLSITMGLMNFVNLAHGSFAVVGGYAAAVVMNQLGLGYATALACAFVVAALV 72

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G ++     +       +  +++S     + I       G +                  
Sbjct: 73  GAVLEFLLYRRLYRAHPLDQVLLSIGLVFVSIASLTYFFGPS-----------MLPFHLP 121

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                  +   +        L+G   L   ++L + RT      R   DNQ+        
Sbjct: 122 EALQGQVTIGGVGVGRYRLFLIGAGLLILVLLLGMLRTRYGAMVRAAVDNQRVAAGTGIH 181

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +    L  FA+             +         F     +  + +V +GG  ++     
Sbjct: 182 VQRLFLLTFALGCGL--AGLGGALSLGMLGLEPYFPLKYMVYFLIVVCVGGAGTIVGPFV 239

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
           A  ++  V                            L+ + +  ++L+R + ++  +
Sbjct: 240 AALLVGIVDVAGKYY--------------LPEAGAFLIYVFMIGMLLLRPNGIIPRK 282


>gi|254250227|ref|ZP_04943547.1| Inner-membrane translocator [Burkholderia cenocepacia PC184]
 gi|124876728|gb|EAY66718.1| Inner-membrane translocator [Burkholderia cenocepacia PC184]
          Length = 347

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/321 (12%), Positives = 95/321 (29%), Gaps = 30/321 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V  + + +   +  S   ++++  Q+ I  + A G++ V+   G + L+     A
Sbjct: 52  LVGLIVVCIAMMIASPSFLSAANLENVLRQVSINAIIAVGMTCVI-LTGGIDLSVGSVMA 110

Query: 76  I-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           + G  +  ++ +       L I ++  +       + +         + +AT+ ++    
Sbjct: 111 LSGTLAAGLMVAGVNAVAALAIGIAVGLGFGFLNGVFVAFAGMPPIIVTLATMGIARGLA 170

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I     PI                                     + +   +L M  + 
Sbjct: 171 LIYTGGYPIDGLPD----------------------WVAFFGSGKVLGIQAPVLIMLVVY 208

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A   L L R         I  N++A       +   KL  + ++     +A         
Sbjct: 209 AIAWLLLDRMPFGRYVYAIGGNEQATRLTGVRVARVKLIVYTLAGLTSALAAIVLTGRLM 268

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                       +  I+ V++GG              I    +   +     N L     
Sbjct: 269 S-GQPNAGVGFELDAIAAVVMGGT-----SISGGRGAILGTLVGALLLGVLNNGLNMIGV 322

Query: 315 SFNMRHTTLMVIALFLVILMR 335
           +  +++     I L  + + R
Sbjct: 323 NPYVQNVIKGGIILLAIYISR 343


>gi|172063678|ref|YP_001811329.1| monosaccharide-transporting ATPase [Burkholderia ambifaria MC40-6]
 gi|171996195|gb|ACB67113.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MC40-6]
          Length = 331

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 98/313 (31%), Gaps = 15/313 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             ++ +V  ++  +   A  SQ+ + ++  Q+   +  + G+ ++V + G + L+     
Sbjct: 23  ALIMLIVLFVVSSVMSPAFLSQENLYNLLRQLTPLLFVSLGM-LLVINTGGIDLSVGSIA 81

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A G     +L           + ++ +++   G + G  +                    
Sbjct: 82  AAGGLLVAMLVPVMPFGGSSGLLIAVVLAVMLGALFGAFNGVLVT--------AFGLAPF 133

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +    I  G   +    +   L   + +      F S  V + I + + ++    ++
Sbjct: 134 IVTLAMMTIARGITYMMSNGQPTMLPLDLPAAELLNEFGSGSVPW-INVPWPVVLGVVVA 192

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 +  T           N+ A      +    K   + +S A   +AG  F A   
Sbjct: 193 LLFYFLMTYTTFGRMVVATGSNETAVRLAGISERGYKFCVYVISGALSAVAGIVFTARTG 252

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +P      E   + + VI      GG  S+        +L  +  +   ++   +   
Sbjct: 253 VGTPITGVGLELDGIATCVIGGALLSGGKGSVLNTVIGVLVLGLIGNVMNLLSVPVYPQQ 312

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 313 IIKGAIIVLAVLV 325


>gi|193068506|ref|ZP_03049468.1| D-xylose ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|192958157|gb|EDV88598.1| D-xylose ABC transporter, permease protein [Escherichia coli
           E110019]
          Length = 393

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 FPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|328542453|ref|YP_004302562.1| branched-chain amino acid ABC transporter permease [polymorphum
           gilvum SL003B-26A1]
 gi|326412200|gb|ADZ69263.1| Branched-chain amino acid ABC transporter, permease protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 317

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 97/301 (32%), Gaps = 16/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y + A G  ++  + G+ +        + A   ++     G+  +L + ++  +
Sbjct: 28  FVSGILYALIALGFVLIFKASGVFNFAQG-IMVVFAGLTLVGLHENGVPAFLALLLTIGV 86

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
            G     +    ++   +   I  L+ +      LI +  +  G     +     +L T 
Sbjct: 87  MGVLAYGVERVVMRPLVNQPDIILLMATIGLTYFLIGFGELVFGGEPKRMIADELWLPTG 146

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             ++             +I    + + M    A + ++  +T I  A R + D+ +A  S
Sbjct: 147 STAIEMGDGGLVILQHIDIAAAVIAMVMV---AGLGVFFNKTRIGRALRAVADDHQAALS 203

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +  ++       +  +       G  + A                  + ++ILGG TS+ 
Sbjct: 204 VGISLNQIWAIVWFAAGIVALATGIMWGARS---DVSFALEIIAFKALPVLILGGFTSIP 260

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  I+    +L            ++           L  I   + +L R   L   
Sbjct: 261 GAIIGGLIIGFGEKLGEIYWGPMVGGGIESW---------LAYIIALIFLLFRPQGLFGE 311

Query: 343 R 343
           R
Sbjct: 312 R 312


>gi|294782093|ref|ZP_06747419.1| galactoside ABC transporter, permease protein MglC [Fusobacterium
           sp. 1_1_41FAA]
 gi|294480734|gb|EFG28509.1| galactoside ABC transporter, permease protein MglC [Fusobacterium
           sp. 1_1_41FAA]
          Length = 339

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/310 (11%), Positives = 87/310 (28%), Gaps = 8/310 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+     + + +      S +   ++  Q  +  + A G++ ++ + G   L+     
Sbjct: 21  LYLVLFCMLIAIIIKEPTFLSLRNFKNILTQSSVRTIIALGVAGLIVTQG-TDLSAGRQV 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     L             +         +I+ L  +        +   +    F 
Sbjct: 80  GLSAVISGTLLQSMTNVNKAFPKLGEFSIFTTVLIVVLVGIIIASINGIVVATLNVHPFI 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +     +    +  Y       +   V    +F +       Y I    +   +  L 
Sbjct: 140 ATMGTMTIVYGINSLYYDKAGAAPISGFVDKYSKFAQGYIQIGSYTIPYLIIYAAIATLI 199

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I+    +T        +  N +A       ++   +  +A+S A+    G   A    
Sbjct: 200 MWILWN--KTKFGKNVFAVGGNPEAAKVSGVNVVLTLIGIYALSGAYYAFGGFLEAGRIG 257

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + + VI      GG+  +S +     IL  +           +   
Sbjct: 258 SATNNLGFMYEMDAIAACVIGGVSFYGGVGRISGVITGVIILTIINYGLTYTGVSPYWQY 317

Query: 310 LKFDCSFNMR 319
           +         
Sbjct: 318 IIKGIIIVTA 327


>gi|91778701|ref|YP_553909.1| ABC sugar transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91691361|gb|ABE34559.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia xenovorans LB400]
          Length = 352

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/319 (14%), Positives = 89/319 (27%), Gaps = 10/319 (3%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
                L  V  L++            +  +        +FA G ++VV + G + ++   
Sbjct: 40  WFTVALIAVTCLIVGAINPRFFQLATLFDLLHSATTMSLFALG-TLVVLASGGIDVS--- 95

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
             AI A +   +                +++GA G ++           L   +LI++  
Sbjct: 96  FTAIAALTMYGITKAVFAWWPDAPFALILLTGALGGVVLGVVNGLLVHRLKAPSLIVTIG 155

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            Q +         G        R       +             V+    +  V   +  
Sbjct: 156 TQYLYRGLLLTFIGTTFFMNIPRSMDHFGRIPLFFYHTADGLRAVLPVSVVALVAAAVLT 215

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
                     RT +      +  +      L   +    L  F  +    G+AG    ++
Sbjct: 216 WWLL-----NRTMMGRGVYAMGGSLAIAERLGYNLRAIHLFVFGYTGMLAGIAGILHVSN 270

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
               +P        + VI+ VILGG             L+GV  +    +      +   
Sbjct: 271 NRLANPFDL-VGSELDVIAAVILGGARITGGTGTVAGTLLGVALVTLINSVLILVDVPST 329

Query: 313 DCSFNMRHTTLMVIALFLV 331
                +    L+   LF +
Sbjct: 330 WQKVIIGAFILIAGTLFAL 348


>gi|258545663|ref|ZP_05705897.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Cardiobacterium hominis ATCC 15826]
 gi|258519130|gb|EEV87989.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Cardiobacterium hominis ATCC 15826]
          Length = 319

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/321 (9%), Positives = 91/321 (28%), Gaps = 27/321 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
            L +    + +  ++   +  +      S     ++  Q+ +  + A+G++ V+  LG +
Sbjct: 12  PLLRQYGGIVIALIILCTVFTIANSRFLSLANFMNIFQQVAVVAIAAFGMTWVI-LLGEI 70

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+         +        L+      +                       
Sbjct: 71  DLSVGSIIAVAGMVGAQSLALGTGFPAALLITIIAGAILG-------------------- 110

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
             ++ +    L+    I            +         +I    + +    + + +  +
Sbjct: 111 -AVNGLLTARLLLPSFIVTVATMSIYRGLVSLPTGGAPLMISDPNWQAIGASHFLGVPLI 169

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  L  +  + L  T           N++A       +   K+  F +S     +AG
Sbjct: 170 IWILLVLFLANHIALSMTVFGRETYLTGGNREAALYSGIRVNRIKIIIFTLSGVMSAIAG 229

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
              ++       +     E   + + V+      GG+ ++        I+  +      +
Sbjct: 230 ILLSSRLYSAQTNAGLSYELDAIAAAVLGGTSLSGGVGTMPGTLIGALIIGVLNNGMNML 289

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
           +  YF  L+       +    
Sbjct: 290 SVPYFYQLIVKGVVIIIAVWL 310


>gi|15966284|ref|NP_386637.1| ABC transporter permease [Sinorhizobium meliloti 1021]
 gi|307307753|ref|ZP_07587482.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
 gi|307317413|ref|ZP_07596853.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|15075555|emb|CAC47110.1| Putative organic acid ABC transporter, permease component
           [Sinorhizobium meliloti 1021]
 gi|306897002|gb|EFN27748.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|306901619|gb|EFN32221.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
          Length = 334

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 84/313 (26%), Gaps = 24/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L A+   + L L      ++  + ++  QI +  + A G + +    G + L+     
Sbjct: 33  VILAALAMFVALSLSTDTFFTELNLLNLLRQISVIGILAVGSTFIF-ISGEIDLSVGALL 91

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     L  +   +I+    V   +      I G+ + K R                
Sbjct: 92  GLLAMICAALAIKMEGNIYGAALVVVALGAILSGINGVITTKLRIPSFITTL-------- 143

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                        +    A  +   G  +  L                +   ++ M    
Sbjct: 144 ----------GMLSIYSGATLVLSKGMPISGLQNDLFRSLVAGRLFGVVPAQVIWMVAAG 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L  T           N+ A  ++       K+ AF VS   +G+          
Sbjct: 194 IFGTYLLLFTRFGYNVFATGGNKNAAKAVGINTDRVKILAFVVSGIMVGVTSFILVGWFR 253

Query: 255 RISPDMFKFSENIIVISIVILGGMT-----SLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            + P      E  ++ +++I G        S+        I+  +      +    +   
Sbjct: 254 GVDPQTGNGLELSVIAAVIIGGTGLFGGQGSVLGTLVGALIIGMISNGTVLLGVDSYYEP 313

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 314 VAHGTVILLAVII 326


>gi|194431345|ref|ZP_03063638.1| D-xylose ABC transporter, permease protein [Shigella dysenteriae
           1012]
 gi|194420800|gb|EDX36876.1| D-xylose ABC transporter, permease protein [Shigella dysenteriae
           1012]
 gi|332084443|gb|EGI89638.1| branched-chain amino acid transport system / permease component
           family protein [Shigella dysenteriae 155-74]
          Length = 393

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLHQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+ ++    G   G      +               
Sbjct: 91  MGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+       + G   R  +   
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQ 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  +++                           +    RTA       
Sbjct: 211 SPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|39934492|ref|NP_946768.1| transport system permease [Rhodopseudomonas palustris CGA009]
 gi|39648341|emb|CAE26861.1| possible transport system permease protein [Rhodopseudomonas
           palustris CGA009]
          Length = 287

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 101/307 (32%), Gaps = 29/307 (9%)

Query: 36  QKYIDSMGIQILI---YVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
            ++  ++   +LI   Y + A G+ +V G  G+++       ++  +  + L S + L  
Sbjct: 2   SEFWQALAQGVLIGSTYGLLALGMGLVYGVSGIVNFAHGDFISLAMFMALALFSAFALDP 61

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           ++   ++  +    G ++    L+    +  +  + ++     +L     +  G      
Sbjct: 62  YVSALITIPVMALIGGLVYRYLLRPMAGHQFLMIVQLTLGLSLVLQNGILMVFGGQ---- 117

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                       S++         V+  +           ++  + + LR T    + R 
Sbjct: 118 -------PARTPSIVESKLIILGDVVLRLPHLIAFAVAFAMAIGLYVMLRSTDFGRSIRA 170

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +  N +A   +   +   ++  FA+  A + +A A                   +I + +
Sbjct: 171 VHQNARAAALMGVDVGRVQVVTFAIGVAILAVAAALLLPGTPI--TPTQGLQYTVITLLV 228

Query: 273 VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
           V+LGGMT+   I  +  ++                 L+                   L++
Sbjct: 229 VVLGGMTNFVSIMLSGLVIGISEAFGQIYVSDTLGRLVP-------------YAIFVLIM 275

Query: 333 LMRSHSL 339
           L R   L
Sbjct: 276 LFRPQGL 282


>gi|194432154|ref|ZP_03064443.1| putative sugar ABC transporter, permease protein [Shigella
           dysenteriae 1012]
 gi|194419683|gb|EDX35763.1| putative sugar ABC transporter, permease protein [Shigella
           dysenteriae 1012]
          Length = 332

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 88/317 (27%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A    S  +           +  +  ++ GA    +             +ATL +    +
Sbjct: 88  AF--VSVCLTFLLQFEVPLAVACLMVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALR 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                        +   I             + +    L M  L 
Sbjct: 146 GMGLFMTN-------------------ALPVPIDENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+T    +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTVFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|302339176|ref|YP_003804382.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
 gi|301636361|gb|ADK81788.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
          Length = 320

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 100/308 (32%), Gaps = 27/308 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + V+  +   +      +   + S+G QI    + + G+++V+   G + ++     
Sbjct: 22  ILFILVLEIIFFAIAHENFLTSTNLLSVGRQISFIGIASIGMTMVM-ITGGIDISVGSML 80

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       L    G+ + L I ++ ++    G+I G+ S       L            
Sbjct: 81  ALAGVVSAKLLVDGGVPLPLAIILTLLVGTFFGLINGVTSEIMHVPPLIST--------- 131

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L     +      I  A  +  +  + + L + + +    V +   +   ++G     
Sbjct: 132 --LAMQTILKGIAFLITNALPVKGVSDSFKYLGQGYLWGWIPVPFLTMLLLFVVG----- 184

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                +L ++        +  N++A            +S +A+   F  +AG   A    
Sbjct: 185 ---WWFLEKSYFGRRIYVVGGNKEAARLSGIDTKKVIISTYALCGFFAALAGILMAGRLG 241

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                    +  + V++  +LGG+       S+  +     I+  +      +    +  
Sbjct: 242 S-GQPSIGTNFPMDVLTATVLGGISVNGGKGSIVNVFFGAFIMGILSNGMIMLGLNEYWQ 300

Query: 309 LLKFDCSF 316
            L      
Sbjct: 301 WLVKGFVL 308


>gi|156936260|ref|YP_001440176.1| hypothetical protein ESA_04159 [Cronobacter sakazakii ATCC BAA-894]
 gi|156534514|gb|ABU79340.1| hypothetical protein ESA_04159 [Cronobacter sakazakii ATCC BAA-894]
          Length = 396

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 59/355 (16%), Positives = 112/355 (31%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  + V+     F+  GA  S + I ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 35  MIAAIVVIMLFFTFMTDGAYLSARNISNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 93

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +   +  I     G  + L I V+ ++    G   G      +               
Sbjct: 94  MGLLGGAAAIFDVWLGWPLPLTIVVTLLLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 153

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+ +     + G   R  +   
Sbjct: 154 GVLIGITNGTTVSPTSPAMSQIGQSYLPGGVGFAIGALGLALFIFWQWRGRMRRQALGLT 213

Query: 171 RFPSSFVIYEIFMYYVL------------------LGMCFLSASIILWLRRTAISNAWRT 212
             PSS V+ +  +  V+                  L + FL  + +     TA       
Sbjct: 214 STPSSAVVSKQALTAVIVLGAIWLLNDYRGVPTPVLILTFLLLAGMFMALHTAFGRRIYA 273

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N  A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 274 IGGNIDAARLSGINVERTKLAVFAINGVMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 333

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 334 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 388


>gi|116252467|ref|YP_768305.1| ribose transport system permease protein [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115257115|emb|CAK08209.1| putative ribose transport system permease protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 325

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 97/312 (31%), Gaps = 21/312 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   + L L      S +   ++  QI +  + A G++ V+   G + L+   A A
Sbjct: 26  LVGLLALCVFLSLSTDTFLSVRNGLNILDQITVLGIMAVGMTFVILIGG-IDLSVGSALA 84

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +         +  GL + + I  + + SG  G+I+GL   +FR                 
Sbjct: 85  LAMMVMGWTANVAGLPLPVGIVFALVASGVSGLIVGLLVTQFRVPAFIAT---------- 134

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  + +   G+                         F +    ++ +L  +     
Sbjct: 135 -----LAMMSAARGVANMITDGQQIVGFPDWFMMLAIDRHFGVLTATVFLMLAVVLAAWL 189

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +               +  N +        +    +  +  SS   G+AG   AA  D 
Sbjct: 190 FLHFRSE----GRMLYAVGGNPEVARLAGINVPLVTIGVYVASSVLAGLAGIVLAARLDS 245

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           + P        +  I+ V++GG +           LIGV+ +    N     ++  F   
Sbjct: 246 VQPSS-GLGYELDTIAAVVIGGTSLSGGAGGIGGTLIGVLIIGVLRNGLNLLNVSPFLQQ 304

Query: 316 FNMRHTTLMVIA 327
             +    ++ + 
Sbjct: 305 VIIGIVIVLAVG 316


>gi|281179594|dbj|BAI55924.1| putative ABC transporter permease component [Escherichia coli SE15]
          Length = 332

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/317 (11%), Positives = 89/317 (28%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +     L          +  +  ++ GA    +             +ATL +    +
Sbjct: 88  AFVSVCLAFLLQ--FEVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALR 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                        +   I             + +    L M  L 
Sbjct: 146 GMGLFMTN-------------------ALPVPINENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|256397409|ref|YP_003118973.1| inner-membrane translocator [Catenulispora acidiphila DSM 44928]
 gi|256363635|gb|ACU77132.1| inner-membrane translocator [Catenulispora acidiphila DSM 44928]
          Length = 652

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/266 (19%), Positives = 112/266 (42%), Gaps = 19/266 (7%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           +      +LL +  G     +   +     L + + A  L  + G  G +SL     + +
Sbjct: 310 VAVASALVLLAVVFGNAVLSEVNVNRMALGLCFAILALSLVPLTGFSGYVSLAQFSFFGV 369

Query: 77  GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           GA +      +   S    +   A+++   G+++ LPSL+ +G YLA++T+  ++I   +
Sbjct: 370 GALTVA----KMHSSAPTAVLAGAVLAAVAGILVALPSLRLQGLYLALSTIAFAQIMDTM 425

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           + +   +  G  G     RL   G    S                    +   +  +  +
Sbjct: 426 VFQNPSL-GGFGGSLTTKRLDMFGYRFTSDK--------------AYALLAAAVFCVLGA 470

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            ++ LR+         +RD+  A  +L      A+++ FA S+A  G+ G  +A  ++++
Sbjct: 471 AVIVLRKGRYGRVLIALRDSPAACATLGLNPRTARVAVFAGSAAVAGLGGGLYAGLQNQV 530

Query: 257 SPDMFKFSENIIVISIVILGGMTSLS 282
               F+F  ++ ++ IV+  G+TS+S
Sbjct: 531 GSTNFQFFNSLPLLLIVVCAGVTSVS 556



 Score = 44.1 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 78/272 (28%), Gaps = 10/272 (3%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y     +    Y + A GL +   +  + ++       + A+ Y  L    GLS WL +
Sbjct: 6   TYTVLGLVIGASYAIAASGLVLTYATTRIFNVAHGATAMVMAFVYWELADNQGLSTWLSV 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +           +    +  R     +   ++      + +          G++   + 
Sbjct: 66  LIVVFGVAPLFGALLERWVIRRVADAGVGVTLVVTCAVLVGLIGAAEKIWPPGVHQVQQF 125

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
           +                   V         +     + A +  +L  T +  A R   D+
Sbjct: 126 FAG----------HGVTVGTVRITGNELLTVALAVVVGAVLWAFLTFTRLGVAMRAAVDD 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           ++               A+A+ SA   +AG    +S       +      +   +  + G
Sbjct: 176 KELLALHGGRPNLMSSIAWAMGSALAALAGILLVSSEPSELNYISLTLLVVNSYAAAMAG 235

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            +TSL +      +L  +     G  +     
Sbjct: 236 RLTSLPRTFVGALVLGLLNAYASGYLWTGPGW 267


>gi|239617343|ref|YP_002940665.1| inner-membrane translocator [Kosmotoga olearia TBF 19.5.1]
 gi|239506174|gb|ACR79661.1| inner-membrane translocator [Kosmotoga olearia TBF 19.5.1]
          Length = 636

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 97/295 (32%), Gaps = 26/295 (8%)

Query: 14  ILCLLAVVYPLLLF----------LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
            + L  +   +L+F          +F  A  S+  +     + +   + A+GL+I     
Sbjct: 302 FVALGIIAVLILIFGENPLYGIREMFSYAFLSRAGLSETLNKAVPITIDAFGLAIAF-YA 360

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGL--SIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           GL ++     + +GA   V +         +W+   +  + S   G I GL     +  +
Sbjct: 361 GLWNIGMEGQFYLGAIGAVWISVFLIPGAPVWIYFIIIPLFSILMGAIWGLIPGFLKVRF 420

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                L         +     +  G    + +  +     +    ++  + P + V   I
Sbjct: 421 GVNEILSTLMFNYVAIRIVDYLVYGP---WKSSSVRNFPLSDPIPVKLPKIPGTDVHVGI 477

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
           F+  V+         +    ++T +   W+ IR N +A            L A  +S AF
Sbjct: 478 FLLPVIA------LLLWFVFQKTTLGFKWKAIRLNNRAARYAGMNPRRFLLLAMVISGAF 531

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS----LSKIAKATAILI 292
            G++GA        +    F        I +  L G+      +S    A   + 
Sbjct: 532 GGLSGAIHMMGAQYVLQSHFSPGYGYTAIIVAWLSGLNPCGIMISGPLLAGLFVG 586


>gi|300927082|ref|ZP_07142834.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 182-1]
 gi|301330355|ref|ZP_07223002.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 78-1]
 gi|300416966|gb|EFK00277.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 182-1]
 gi|300843689|gb|EFK71449.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 78-1]
          Length = 332

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/317 (11%), Positives = 89/317 (28%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +     L          +  +  ++ GA    +             +ATL +    +
Sbjct: 88  AFVSVCLAFLLQ--FEVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALR 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                        +   I             + +    L M  L 
Sbjct: 146 GMGLFMTN-------------------ALPVSIDENEVLDWLGGQFLGVPVSALIMIVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|297543755|ref|YP_003676057.1| inner-membrane translocator [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841530|gb|ADH60046.1| inner-membrane translocator [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 318

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 84/312 (26%), Gaps = 27/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  V   ++  +          + ++  Q  +  + A G++ V+   G + L+     A
Sbjct: 23  LIGLVGLIVVFSILSPRFLDYYNLTNVLRQTSLNAIMAVGMTFVI-LTGGIDLSVGSILA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             +     +       I  ++    + +G       +        ++A   ++       
Sbjct: 82  FSSAITAGMLKDGSPLIIAVLAGLIIGTGLGFFNGFVIIRWNIPPFIATFAMMTVARGLT 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           ++        G                         F      Y   +   ++    + A
Sbjct: 142 LVYTNGQPITG---------------------LGAAFGYIGNGYIGPIPVPIILTVLIFA 180

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L+   +         N +A            L  +++S     ++G    +  + 
Sbjct: 181 IGYYILKNNRLGRYVYATGGNIQAAKLAGINTNNIILFVYSLSGFLAAISGLIITSRLNS 240

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            +P   + +E   + ++V     + GG   +        I+  +      +N   F  L+
Sbjct: 241 AAPTAGQGAELDAIAAVVLGGTSLSGGEGGVIGTLIGALIIGILNNGLNLLNVSPFYQLI 300

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 301 AKGAVILLAIAL 312


>gi|238750240|ref|ZP_04611742.1| Xylose transport system permease protein xylH [Yersinia rohdei ATCC
           43380]
 gi|238711473|gb|EEQ03689.1| Xylose transport system permease protein xylH [Yersinia rohdei ATCC
           43380]
          Length = 362

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 55/355 (15%), Positives = 106/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  +AV+     F   GA  S + I ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 1   MLAAIAVIMLFFTFTTEGAYLSARNISNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 59

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +   +  I     G  + L I V+  +    G   G      +               
Sbjct: 60  MGLLGGAAAIFDVWLGWPLPLTIVVTLGLGLVLGAWNGWWVAYRKVPSFIVTLAGMLAFR 119

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+ +     +   + R  +   
Sbjct: 120 GILIGITNGTTVSPTSNAMSQIGQSYLPNGLGFGIGAIGLMLFVAWQWRRRSHRIRLGLP 179

Query: 171 RFPSSFVIYEIFMYYVL------------------LGMCFLSASIILWLRRTAISNAWRT 212
                  +    +  ++                  L +  L  + I    RTA       
Sbjct: 180 VAAPQGDVTRQSITAIIVLGAIYLLNDYRGVPTPVLILTALMLAGIFMATRTAFGRRIYA 239

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N  A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 240 IGGNIDAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 299

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 300 VIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGAILLLAVWM 354


>gi|167722064|ref|ZP_02405300.1| ABC transporter permease protein [Burkholderia pseudomallei DM98]
          Length = 317

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 92/311 (29%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 18  VLVLLCVGFGFMTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 76

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S      WL IP +  +  A G++ G      R     +    ++ +     
Sbjct: 77  A-VASLLASNLPGWGWLGIPAALAVGLAFGVVNGGLISFLRLPPFIVTLGALTAVRGIAR 135

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    +G           F        + + ++++    + A  
Sbjct: 136 L--------------------MGNDTTIFNPQLPFAFIGNGSILGVPWLVVIALAVVAIS 175

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +      +  N +A       +   +L  +A S    G+     AA     +
Sbjct: 176 WFILRRTVLGMRIYAVGGNPEAARLSGINVRGIELFVYASSGLLAGLGALMSAARLYAAN 235

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 236 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLSNGLVLLGVSDIWQYII 295

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 296 KGLVIIGAVAL 306


>gi|300716535|ref|YP_003741338.1| sugar ABC transporter permease [Erwinia billingiae Eb661]
 gi|299062371|emb|CAX59488.1| Putative sugar ABC transporter, permease protein [Erwinia
           billingiae Eb661]
          Length = 328

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 91/318 (28%), Gaps = 20/318 (6%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I  L+ V   L          S + I ++        + A G++ V+   G + L+    
Sbjct: 10  ITLLVFVAGYLFCLSQFPGFASTRVIANILTDNAFLGIIAVGMTFVI-LSGGIDLSVGAV 68

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            A            + L  WL   +  ++  A G  MG      +     I    M    
Sbjct: 69  IAFTGVFLARAIGDFHLDPWLAFALVMVMGSAFGAFMGWLIDALKIPAFIITLAGMF--- 125

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
                       G + +     L        +L              +    +L+ + F 
Sbjct: 126 ---------FLRGSSFLVSESSLPIDHPLYSTLSSLAWKIPGGGRLSLLAVIMLVVVVFG 176

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
                    R+   N    I  N  +   +  +     +  + +SSA   +AG  F+   
Sbjct: 177 IVLAH----RSRFGNQVYAIGGNVTSAQLMGISTRSTTIRIYMLSSALATLAGIVFSIYT 232

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
                 +      +  I+ V++GG  +L      T +      L  G+   + N      
Sbjct: 233 SS-GYALAGMGVELDAIASVVIGG--TLLSGGVGTVLGTLFGVLIQGLIQTWINFDGTLS 289

Query: 314 CSFNMRHTTLMVIALFLV 331
             +      +++ A   +
Sbjct: 290 SWWTKIAIGILLFAFIAL 307


>gi|167562835|ref|ZP_02355751.1| ribose ABC transporter, permease protein [Burkholderia oklahomensis
           EO147]
          Length = 337

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 86/299 (28%), Gaps = 27/299 (9%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                 +     ++  QI   V+ + G++ V+   G + L+     A+ A    +   R+
Sbjct: 51  LSSHFLTYDTFSTIANQIPDLVVLSVGMTFVLIIAG-IDLSVGSVLALAASVVSVAALRW 109

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
                    V    + A G + G  ++ +R       +L + E  + +  +         
Sbjct: 110 QWPPLAAALVGVAAAAATGTLTGAVTVGWRIPSFI-VSLGVLEAARGVAYQLTNSRTAYI 168

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G                      F        + +    L    +       L RT    
Sbjct: 169 GDA--------------------FDFLSNPIALGISPAFLIAVAVMVVAQFVLARTVFGR 208

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N++A           K+  FA+  A  G+A  F  +  +   P+     E  +
Sbjct: 209 YLVGIGTNEEAVRLAGVNPRPYKIIVFALMGALAGLAALFQISRLEAADPNAGAGLELQV 268

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + ++VI     +GG  S+        I+  +      +        +       +    
Sbjct: 269 IAAVVIGGTSLMGGRGSVVSTFFGVLIISVLAAGLAQIGANEPTKRIITGAVIVVAVVL 327


>gi|186472318|ref|YP_001859660.1| monosaccharide-transporting ATPase [Burkholderia phymatum STM815]
 gi|184194650|gb|ACC72614.1| Monosaccharide-transporting ATPase [Burkholderia phymatum STM815]
          Length = 342

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/295 (9%), Positives = 86/295 (29%), Gaps = 25/295 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +++ +L ++ +    L  +      +   + ++   +    + A  +++++     + L+
Sbjct: 18  RWETLLVVVLIASLGLGRVLSPVFLTGANLSNVLADLAEIALMALPMTLII-VAAEIDLS 76

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                   +    +L         +      ++      ++           L + +L +
Sbjct: 77  VASVLGASSALMGVLWHMGLPMPVV------IVLVLASGMIAGLLNGLVIVKLNLPSLAV 130

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +     +      +  G   +      Y                    ++  F+      
Sbjct: 131 TIGTLALFRGLSYVLLGDQAVADFPPNYTAFGMDT-------------LFGTFVPLPFAI 177

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +   +    + L+ TA       I  N  A       +   +L  F +S     +AG  +
Sbjct: 178 VIVCAVLFTVLLQATAFGRCLYAIGANSTAAAFSGIEVAKVRLLLFVLSGFMSALAGIVY 237

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCC 299
                    D  +  E  ++ +++     I GG  S+  +  +  I+  +     
Sbjct: 238 TLRFTSARGDNGEGFELSVIAAVLFGGVSIFGGRGSMVGVLLSLLIIGVLKNALT 292


>gi|56708885|ref|YP_164928.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56680570|gb|AAV97235.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 289

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 80/256 (31%), Gaps = 12/256 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y +F  GL+++ G + + ++        GA +   LG    +   +L+PV
Sbjct: 8   LINGLFLGGLYALFGLGLTLIFGVMRIANIAHGEIAVAGALALFTLGGNLPVHPLVLLPV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +++   G ++    +        +  L+++     +L        G            
Sbjct: 68  VMVLAFGLGWLLQAQLINRVLSADPMPALLLTFGLSVVLQNLMVEIYGADNRS------- 120

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   I+   F    V        + L    L   + L L+ T +  A R    +  
Sbjct: 121 ---IDIGTIKTAGFQIGGVTLGYLPLAIFLLALVLFGLLHLGLQHTRLGRAIRATSQDAD 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                            A+++ F  +AG   A                +I   ++++GG+
Sbjct: 178 IVALFGIRQKRVFALVMALAAGFAALAGMLLAMRSTI--TPFSGAERLLIAFEVIVIGGL 235

Query: 279 TSLSKIAKATAILIGV 294
            S+         L  V
Sbjct: 236 GSIWASYLGGIALALV 251


>gi|320180543|gb|EFW55474.1| putative sugar ABC transport system, permease protein YphD
           [Shigella boydii ATCC 9905]
 gi|332089719|gb|EGI94820.1| putative ABC transporter permease protein yphD [Shigella
           dysenteriae 155-74]
          Length = 332

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 88/317 (27%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +     L          +  +  ++ GA    +             +ATL +    +
Sbjct: 88  AFVSVCLAFLLQ--FEVPLAVACLMVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALR 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                        +   I             + +    L M  L 
Sbjct: 146 GMGLFMTN-------------------ALPVPIDENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+T    +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTVFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|297539871|ref|YP_003675640.1| inner-membrane translocator [Methylotenera sp. 301]
 gi|297259218|gb|ADI31063.1| inner-membrane translocator [Methylotenera sp. 301]
          Length = 294

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 91/306 (29%), Gaps = 24/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A ++ +      +  WL   +
Sbjct: 9   LIGGLLSGVMYSLVAIGFVLIYKASGVFNFAQGSMVLFSALTF-VSLLERHVPFWLAFGM 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +   A    +    L+   +   I   + +     I+        G            
Sbjct: 68  TMLTMIALAWAVERFVLRPLVNRPPITLFMATLGLSYIVEGLAQAVWGAQ---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I    F    ++   F  +       L   +     +T      R + D+Q 
Sbjct: 118 -VHGLELGISDEPFEFLGLLLSQFDLFAAGVAGALVLLLSFLFNKTRTGIELRAVADDQL 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +    L  +AV+     +AG  + A               +  + ++I+GG 
Sbjct: 177 AALSVGIKLQKLWLIVWAVAGFVGLVAGLLWGARLGVQFSLS---LIVLKALPVLIIGGF 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+    +L            ++              +   + +L+R   
Sbjct: 234 TSIEGAIVGGLIVGASEKLAEVYIGPIIGGGIENWFP---------YVLATVFLLIRPTG 284

Query: 339 LLRLRT 344
           L   +T
Sbjct: 285 LFGEQT 290


>gi|291300615|ref|YP_003511893.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728]
 gi|290569835|gb|ADD42800.1| inner-membrane translocator [Stackebrandtia nassauensis DSM 44728]
          Length = 335

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 88/311 (28%), Gaps = 27/311 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               ++             S      +  Q+ +    A G ++++ S G + L+     A
Sbjct: 33  LCALLIAIAFFSTMADNFLSLNTAALVLQQVTVIGTLALGQTLIILSAG-IDLSVGAVMA 91

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA--TLIMSEIF 133
            G+     L    GL   L I     + G  G+  G+   K +     +    L ++   
Sbjct: 92  FGSIVMTKLAVDSGLPPVLAILAGIAVCGLFGLANGMLVTKIKLPPFIVTLGMLNVAYAL 151

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
            +I      IT                              +F + +  + Y  L M  L
Sbjct: 152 THIYSNEATITGVP-------------------ATLTALGETFPVGDARVSYGSLLMLVL 192

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
            A+  + L  TA         +N +        +     S + V+    G+A     A  
Sbjct: 193 FAAFAVVLANTAWGRRLYATGNNFEGTRLTGVPVRRHLQSVYLVAGLVFGVAALLMVART 252

Query: 254 DRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
               P + +      + ++V     + GG  ++        I+  V      M       
Sbjct: 253 GVGDPKVGQTENLESITAVVLGGTSLFGGRGAVLGTLLGVLIVGVVRSGLQMMGVLPIYQ 312

Query: 309 LLKFDCSFNMR 319
           +L       + 
Sbjct: 313 ILVTGILVILA 323


>gi|162451825|ref|YP_001614192.1| putative simple sugar transport system permease protein [Sorangium
           cellulosum 'So ce 56']
 gi|161162407|emb|CAN93712.1| putative simple sugar transport system permease protein [Sorangium
           cellulosum 'So ce 56']
          Length = 347

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 79/266 (29%), Gaps = 14/266 (5%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G+++L+   A  + A                   ++   + A    +    +   G YL
Sbjct: 41  AGVINLSAEGAMMLSAMVGFAAALST------GSVLAGFAAAAATGALVALVVAIGGIYL 94

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
             + + +  +   +      +  G         +      V   +             ++
Sbjct: 95  GRSQIAVGFVLAMLCADLSSVLGGPYVRVPGPTVPAASIPVLRDVPLVGPLLFQSDPLVY 154

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
             YVL+   +      L+L RT      R + +   A  +    +   + +A  V  A +
Sbjct: 155 GSYVLVACAW------LFLYRTRAGLLLRAVGEQPAAAHARGAHVTRVRTAATLVGGALV 208

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+AGA ++                 I ++IVI GG   +   A    +   +      + 
Sbjct: 209 GLAGAAYSLDFKAGWSHRHTAGYGWIALAIVIFGGFHPVR-AALGAYLFGVLSSA-ASLG 266

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIAL 328
                S+     S       + V+ L
Sbjct: 267 QSALPSVPTQVFSVAPFALMIAVLGL 292


>gi|289675635|ref|ZP_06496525.1| inner-membrane translocator [Pseudomonas syringae pv. syringae FF5]
          Length = 279

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 55/194 (28%), Gaps = 2/194 (1%)

Query: 58  IVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
           I  G LG++++       +GAYS  ++           I    +I+      +       
Sbjct: 88  ITFGLLGVINMAHGEMLMLGAYSTYVVQLMLQRYAPGAIEYYPLIALPVAFFVTAVIGMA 147

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
                 +   +     + +L  W         + +A     +       +         +
Sbjct: 148 LER--TVIRHLYGRPLETLLATWGISLMLIQAVRLAFGAQNVEVANPQWLSGGIQVLPNL 205

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++    F+     L L +T +    R +  N+              + AF +
Sbjct: 206 VLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRIDMMAFGL 265

Query: 238 SSAFIGMAGAFFAA 251
            S   G+ G   + 
Sbjct: 266 GSGIAGLGGVALSQ 279


>gi|254476045|ref|ZP_05089431.1| inner-membrane translocator [Ruegeria sp. R11]
 gi|214030288|gb|EEB71123.1| inner-membrane translocator [Ruegeria sp. R11]
          Length = 373

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/308 (12%), Positives = 89/308 (28%), Gaps = 23/308 (7%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I+  + V    L+F       + + + + G     +++ A G  +++   G   L+   
Sbjct: 31  GIIGTILVFAMFLIFAGDSGMFNSQGVLNWGQISAQFMIIAVGACLLM-IAGEFDLSVGS 89

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSL------KFRGDYLAIAT 126
                     I     G  +W+ I V+ +I+ A G + G   +                 
Sbjct: 90  MIGFAGMLIAIFSVTLGWPVWMAIIVTFVIALAIGALNGYIVVRTGLPSFIVTLAFLFIL 149

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI----- 181
              +      + +   I                G  + + +  +   + ++         
Sbjct: 150 RGFAIYLPQTIERKTIIGGVSDAAQGDWLAAVFGGKILTGLFQWLGDNGWIAVFERGTRK 209

Query: 182 ------FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +  +++    L     + L +T   N       + +A  +    +   K+  F
Sbjct: 210 GQPVVDGLPMLVVWAIVLVIVGHVILTKTRFGNWIFAAGGDAEAARNSGVPVNRVKILMF 269

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAI 290
             ++    +  A           D     E   +I++VI      GG  S+   A    I
Sbjct: 270 MFTAFCATVFAACQVMEFGGAGSDRGLLKEFEAIIAVVIGGALLTGGYGSVIGAALGALI 329

Query: 291 LIGVVELC 298
              V +  
Sbjct: 330 FGVVQQGL 337


>gi|170767467|ref|ZP_02901920.1| putative sugar ABC transporter, permease protein [Escherichia
           albertii TW07627]
 gi|170123801|gb|EDS92732.1| putative sugar ABC transporter, permease protein [Escherichia
           albertii TW07627]
          Length = 332

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/317 (11%), Positives = 90/317 (28%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +     L          +  +  ++ GA    +             +ATL +    +
Sbjct: 88  AFVSVCLAFLLQ--FDVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALR 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                        +   I             + +    L M  L 
Sbjct: 146 GMGLFMTN-------------------ALPVPIDENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +  +    E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGVANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|237812147|ref|YP_002896598.1| membrane protein component of ABC ribose transporter [Burkholderia
           pseudomallei MSHR346]
 gi|237505499|gb|ACQ97817.1| membrane protein component of ABC ribose transporter [Burkholderia
           pseudomallei MSHR346]
          Length = 337

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 85/300 (28%), Gaps = 27/300 (9%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      +     ++  QI   V+ + G++ V+   G + L+     A+ A    +   R
Sbjct: 50  VLSSHFLTYDTFSTIANQIPDLVVLSVGMTFVLIIAG-IDLSVGSVLALAASVVSVAALR 108

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                          + A G + G  ++ +R       +L + E  + +  +        
Sbjct: 109 GQWPPLPAALAGVAAAAATGTLTGAVTVGWRIPSFI-VSLGVLEAARGVAYQLTNSRTAY 167

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
            G                      F        + +    L    +       L RT   
Sbjct: 168 IGDA--------------------FDFLSNPIALGISPAFLIAVAVMIVAQFVLARTVFG 207

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                I  N++A           K+  FA+  A  G+A  F  +  +   P+     E  
Sbjct: 208 RYLVGIGTNEEAVRLAGVKPRPYKIIVFALMGALAGLAALFQISRLEAADPNAGAGLELQ 267

Query: 268 IVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           ++ ++VI     +GG  S+        I+  +      +        +       +    
Sbjct: 268 VIAAVVIGGTSLMGGRGSVVSTFFGVLIISVLAAGLAQIGANEPTKRIITGAVIVVAVVL 327


>gi|13474169|ref|NP_105737.1| sugar (ribose) ABC transporter (permease) [Mesorhizobium loti
           MAFF303099]
 gi|14024921|dbj|BAB51523.1| Sugar (ribose) ABC transporter (permease) [Mesorhizobium loti
           MAFF303099]
          Length = 358

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 76/277 (27%), Gaps = 13/277 (4%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +    ++  +  + +Q+ I  + A G++ V+   G + L+          +  ++   + 
Sbjct: 57  VSGIFNEARLQIIILQVSIVGIIAIGVTQVI-ICGGIDLSSGSIVG----ATAMIAMSFA 111

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
               +    +            LP +      +    L        I     P      G
Sbjct: 112 QVATVNGNPNPKAMFLAQGWTDLPVIVPLLVAIGCGLLAGLVNGSLIAYTRIPPFIATLG 171

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           + V  R      +    I F     + +   +    + L +        L +  T     
Sbjct: 172 MMVTARGIAKWWSKGQPISFPTDSFAAIGKGLMPVIIFLSLA---VLFQLIMSYTRYGKH 228

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              I  N+ A       I   K+  + ++     +A     +        M    E   +
Sbjct: 229 CYAIGSNEDAARMSGIKIANHKILVYVIAGILASLAAVVLCSKNLTAQAGMGVMYELDAI 288

Query: 270 ISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
              VI      GG  S+      + I   ++     +
Sbjct: 289 AMAVIGGVSLSGGRGSIVGTVIGSLIFGVIISGFTFL 325


>gi|302669360|ref|YP_003832510.1| sugar ABC transporter permease [Butyrivibrio proteoclasticus B316]
 gi|302397024|gb|ADL35928.1| sugar ABC transporter permease protein [Butyrivibrio
           proteoclasticus B316]
          Length = 356

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 85/312 (27%), Gaps = 17/312 (5%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           L+    G       + ++        + A G+++V  + G   ++     AI      +L
Sbjct: 41  LVTNNAGNPMLSGSLITILDFGSELGILAIGMTLVTAASGGQDISVGATIAIAG--SAML 98

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
               G         + +I       +   +       L     I   I   IL       
Sbjct: 99  RILCGKEAHPETIQAPIILAFLVACLVGMACGLFNGTLVAVFKIQPMIATLILFTAGRSI 158

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                      +                    VI  I +   +  +      + L L+ T
Sbjct: 159 GAWINHNQLPIVPDPKFAY----------FGGVIPGIPIPTTVFIVIACIIVMALILKFT 208

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            +    + +  N+K+           K+ +F +    + +A     +    I+  +    
Sbjct: 209 NLGLYTQAVGINEKSARLNGINPTAIKILSFVILGLCVAVAALIKVSRLSTINYSVIAKD 268

Query: 265 ENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
             +  I  V LGG              +    L   +  +   +L KFD   +       
Sbjct: 269 IEMDAILAVALGGN-----ALSGGKFNMWASILGAYVIQFLTTTLYKFDVQSDALAAYKA 323

Query: 325 VIALFLVILMRS 336
           V+ + LV+    
Sbjct: 324 VVVIILVVFSAP 335


>gi|300979725|ref|ZP_07174675.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 200-1]
 gi|300307943|gb|EFJ62463.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 200-1]
          Length = 329

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/321 (12%), Positives = 95/321 (29%), Gaps = 27/321 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           ++ +    +    VV  +L      +  +   I ++ +Q+ I  + A+G++ V+  LG +
Sbjct: 22  KVFRQYGGILSGMVVLIILFSFINDSFFTANNITNIILQVSIIAITAYGMTYVL-LLGDI 80

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+      +  S     I L+            +                  
Sbjct: 81  DLSVGSTIALIGTFAALGASWGIPFILLVPLSIIAALALGMI------------------ 122

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
              +     I      I             Y +   +  +I+   F +      +++   
Sbjct: 123 ---NGGLTAIAGIPSFIVTVATMGIFRGIAYIVTDGMPIMIKDDAFLALGNGEFLYIPIP 179

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  L       L +T           N++A       +   K+  F +++   G++G
Sbjct: 180 IWILIILLLINHFILTKTTFGRKIYITGGNKEAAIYSGINVTRLKIKVFMITAVLAGISG 239

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGM 301
              A+      P+     E   + + V+      GG  ++         +  +      M
Sbjct: 240 MILASRLYSGQPNSALSYELDAIAAAVLGGTSLNGGYGTVVVTVIGALTIGVINNGMNLM 299

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
           N  YF  ++       +    
Sbjct: 300 NVPYFYQMVVKGLVILVAVYF 320


>gi|165976853|ref|YP_001652446.1| beta-methylgalactoside transporter inner membrane component
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
 gi|165876954|gb|ABY70002.1| galactoside ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
          Length = 337

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/297 (9%), Positives = 79/297 (26%), Gaps = 7/297 (2%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            +  S +   ++  Q  + ++ A G++ ++ + G   L+      + A     L      
Sbjct: 34  PSFLSLRNFSNILSQSSVRLIIALGVAGLIVTQG-TDLSAGRQVGLAAVITATLMQSMEN 92

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              +   ++ +      + +        G  L    +    +   I      I       
Sbjct: 93  MNRVFPNLAEIPIPVVILAVCAIGCNLIGL-LNGFVIAYLNVTPFIATMGTMIIVYGINS 151

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
              D +        S          F   +  + Y+ +     +  +     +T      
Sbjct: 152 LYYDAVGGSPIAGFSDSFSTFAQGFFRFGDFKLSYITIYAIIATLIMWTLWNKTRFGKNI 211

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N +A       +    +  + +S  F    G   A      + ++    E   + 
Sbjct: 212 FAIGGNPEAARVSGVNVPLNLMGIYMLSGVFYAFGGMLEAGRIGSATNNLGFMYEMDAIA 271

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + V+      GG+ ++  +     I   +      +    +   +       +    
Sbjct: 272 ACVVGGVSFAGGVGTIIGVVTGVIIFTVINYGLTYIGVNPYWQYIIKGGIIVLAVAI 328


>gi|83721448|ref|YP_442994.1| ribose ABC transporter permease [Burkholderia thailandensis E264]
 gi|167581979|ref|ZP_02374853.1| ribose ABC transporter, permease protein [Burkholderia
           thailandensis TXDOH]
 gi|167620144|ref|ZP_02388775.1| ribose ABC transporter, permease protein [Burkholderia
           thailandensis Bt4]
 gi|257139220|ref|ZP_05587482.1| ribose ABC transporter, permease protein [Burkholderia
           thailandensis E264]
 gi|83655273|gb|ABC39336.1| ribose ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 337

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 86/299 (28%), Gaps = 27/299 (9%)

Query: 29  FLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY 88
                 +     ++  QI   V+ + G++ V+   G + L+     A+ A    +   R+
Sbjct: 51  LSSHFLTYDTFSTIANQIPDLVVLSVGMTFVLIIAG-IDLSVGSVLALAASVVSVAALRW 109

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
                    +    + A G + G  ++ +R       +L + E  + +  +         
Sbjct: 110 QWPPLAAALIGVAAAAATGTLTGAVTVGWRIPSFI-VSLGVLEAARGVAYQLTNSRTAYI 168

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
           G                      F        + +    L    +       L RT    
Sbjct: 169 GDA--------------------FDFLSNPIALGISPAFLIAVAVMIVAQFVLARTVFGR 208

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N++A           K+  FA+  A  G+A  F  +  +   P+     E  +
Sbjct: 209 YLVGIGTNEEAVRLAGVNPRPYKIIVFALMGALGGLAALFQISRLEAADPNAGAGLELQV 268

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + ++VI     +GG  S+        I+  +      +        +       +    
Sbjct: 269 IAAVVIGGTSLMGGRGSVVSTFFGVLIISVLAAGLAQIGANEPTKRIITGAVIVVAVVL 327


>gi|119387722|ref|YP_918756.1| inner-membrane translocator [Paracoccus denitrificans PD1222]
 gi|119378297|gb|ABL73060.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Paracoccus denitrificans PD1222]
          Length = 321

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 83/284 (29%), Gaps = 26/284 (9%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           + G   +++      ++ GA + V L +        L+     +     +I      + R
Sbjct: 60  IYGVGRIVNFAHGALFSAGAMAGVWLVASGVPFGVALVVAPVAVGLIGVLIDWAILARIR 119

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
              +  + L+   +   I      +      I    ++                    + 
Sbjct: 120 DRPMVDSLLLTFGLALLITGILYELGGRNVQIMPVPQVLGGV-----------ISLGGIS 168

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
              +  +V +    L+ ++IL+L+ +      R   D+ +        I   +L    V 
Sbjct: 169 LPTYRVFVSVLAIALTIALILFLKNSKWGLRVRAANDDPE--MGACIGIDRERLMHSVVG 226

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
            +    A +  AA+    +  +      I+    VILGG+ SL     A   +  ++   
Sbjct: 227 VSAALAAASGVAAAPIFTAHAVVGDKILILAFMTVILGGLGSLRGAVVAAYAVGLILVFG 286

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
            G                      L+ I +  +++         
Sbjct: 287 EGYFG-------------GQLALMLLFIVVMAMLINWPRGFFGE 317


>gi|332529857|ref|ZP_08405810.1| putative amino acid transmembrane protein [Hylemonella gracilis
           ATCC 19624]
 gi|332040699|gb|EGI77072.1| putative amino acid transmembrane protein [Hylemonella gracilis
           ATCC 19624]
          Length = 343

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 48/339 (14%), Positives = 119/339 (35%), Gaps = 35/339 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  M + GL+++   +G+L+      Y +GAY      +R     WL + V
Sbjct: 8   MLNGLSYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYL-GYTVARDFTGFWLGLIV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADR--- 155
           + ++ GA G +    +L+    +  +  L+++     I+++   +  G+  +        
Sbjct: 67  APLLVGALGALFERLALRKVHAHGHVPELLITFGLSYIILELVQLIWGRLPLEFRPPELL 126

Query: 156 ---------------LYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
                          L  +              ++   +     ++++    +  ++ L 
Sbjct: 127 QGPVFTLVHDSGVNALSGMHLVWGRASAEACAVAACSPFPATRGFMMVVALLMLVALWLM 186

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           L ++ I    R    + +   +L   +    +  F   +A  G+AG    +    ++   
Sbjct: 187 LTKSRIGLVIRASLSHPEMAEALGHNVPRVFMLVFGAGAALAGLAGVIGGS--TFVTEPA 244

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              +   ++  +V++GG+ SLS    A+ ++  +       ++   + L       +   
Sbjct: 245 MAATVGSVIFVVVVVGGLGSLSGAFLASVLIGVIQTFAVAFDYSLVHLLQALGMELSAAA 304

Query: 321 T--------------TLMVIALFLVILMRSHSLLRLRTP 345
                           L  + L LV++ R   LL  R  
Sbjct: 305 RNHSILKLTLAQVAPILPYLFLVLVLIFRPKGLLGTREE 343


>gi|118478299|ref|YP_895450.1| sugar ABC transporter permease [Bacillus thuringiensis str. Al
           Hakam]
 gi|118417524|gb|ABK85943.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Bacillus thuringiensis str. Al Hakam]
          Length = 338

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/331 (13%), Positives = 101/331 (30%), Gaps = 33/331 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +++ +L +L ++  +L         +   +       L   + A  ++ V+   G + ++
Sbjct: 15  RWEGVLIVLLLLEFILFSFINSDFLNISNLLFSTNDFLFIAIAAIPMTFVI-VTGGIDVS 73

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 + +    +L       ++ +I    +   A  +   +  +      +     + 
Sbjct: 74  VGSIMGLTSILIGVLWMNEISILFAVIIALIISCLAGALNGLIIKMTDVEPLVVTLGTMF 133

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 ++I      +G  GI                     F        I +  +L  
Sbjct: 134 LYGGIALVISGGAGASGYEGISGLP---------------DAFVQLANGSFIGIPNLLWL 178

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+    +   RT      +    N+              + A+ +S    G+ GAF 
Sbjct: 179 LIVLTVLCAVLFHRTIYGRHVKLTGANENTAKYTGIKTKKVVIIAYILSGLGGGLGGAFL 238

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            A       DM   +   I+ ++V     I GG  S+     A+  +  +          
Sbjct: 239 TAYFGSARADMGSETILPIITAVVLGGTLITGGKGSIIGTVLASIFIGLMQ--------- 289

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
                L+     N +   ++ I L L ++MR
Sbjct: 290 ---YGLQMTGLTNEQSNVVIGIILILSVIMR 317


>gi|209550519|ref|YP_002282436.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209536275|gb|ACI56210.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 332

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/316 (10%), Positives = 93/316 (29%), Gaps = 23/316 (7%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
              + +  ++  L L     +  + K + ++   +    + A G+++V+   G + L+  
Sbjct: 25  TFWVLIAVLLACLFLSFATDSFATSKNLYNITRNVTFVAIIALGMTLVI-ITGGIDLSVG 83

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               + +    +  +                  +  + +    +           LI   
Sbjct: 84  SVLCLCSMVLAVTMN---------------AGYSIEVGITAAIVTALVIGAFNGVLIAYL 128

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            F   ++    ++  ++   VA     +        +          + I    + + + 
Sbjct: 129 NFPPFVVTLGMLSIARSLAMVASNNTVVFQFGPDHDKLLALGGGAWFFGIANPVLYMVIL 188

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L    +L   R         I  N+ A       +   K++ + +S+   G+AG     
Sbjct: 189 ALITGFVLRWTR--FGRYIFAIGGNEHAATLTGVPVRSIKVAVYMISALSAGIAGIVQTG 246

Query: 252 SRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
               ++ ++    E  ++ + VI      GG+ +        A++  +      +    F
Sbjct: 247 WLGAVTTNIGAGMELQVIAAAVIGGANLAGGIGTAFGALVGAALIEVIRNSLGLLGINAF 306

Query: 307 NSLLKFDCSFNMRHTT 322
                   +  +    
Sbjct: 307 WQGTFIGGAIVLAVLF 322


>gi|53719445|ref|YP_108431.1| putative ribose transport system, permease [Burkholderia
           pseudomallei K96243]
 gi|126442247|ref|YP_001058891.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|134282342|ref|ZP_01769047.1| putaive ribose ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|226196316|ref|ZP_03791898.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|254179890|ref|ZP_04886489.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|52209859|emb|CAH35831.1| putative ribose transport system, permease protein [Burkholderia
           pseudomallei K96243]
 gi|126221740|gb|ABN85246.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|134246380|gb|EBA46469.1| putaive ribose ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|184210430|gb|EDU07473.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|225931533|gb|EEH27538.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
          Length = 337

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 85/300 (28%), Gaps = 27/300 (9%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      +     ++  QI   V+ + G++ V+   G + L+     A+ A    +   R
Sbjct: 50  VLSSHFLTYDTFSTIANQIPDLVVLSVGMTFVLIIAG-IDLSVGSVLALAASVVSVAALR 108

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                          + A G + G  ++ +R       +L + E  + +  +        
Sbjct: 109 GQWPPLPAALAGVAAAAATGTLTGAVTVGWRIPSFI-VSLGVLEAARGVAYQLTNSRTAY 167

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
            G                      F        + +    L    +       L RT   
Sbjct: 168 IGDA--------------------FDFLSNPIALGISPAFLIAVAVMIVAQFVLARTVFG 207

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                I  N++A           K+  FA+  A  G+A  F  +  +   P+     E  
Sbjct: 208 RYLVGIGTNEEAVRLAGVNPRPYKIIVFALMGALAGLAALFQISRLEAADPNAGAGLELQ 267

Query: 268 IVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           ++ ++VI     +GG  S+        I+  +      +        +       +    
Sbjct: 268 VIAAVVIGGTSLMGGRGSVVSTFFGVLIISVLAAGLAQIGANEPTKRIITGAVIVVAVVL 327


>gi|324326934|gb|ADY22194.1| sugar ABC transporter permease [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 317

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 91/313 (29%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + LL ++Y  ++ +   +      +  +    +I V+ A G S V+     + ++     
Sbjct: 12  IILLLLMYIAIVGIINPSFIQFNSLSLLMKSSVILVVLAIGQSFVL-FTKNIDVSVGSIM 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A    +L +             ++ +      +             +  +IM+    
Sbjct: 71  GLSAAVCGMLLTNEYS------ASLSIFAAITLGTIIGFVNGVGVAKFRVPAIIMTLGML 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+     I  G   I                     F     I  + +   +  +  + 
Sbjct: 125 GIIRGAMLIFTGGKWIEDIP---------------HDFKQLSSIVILGLPITVWFVLIIL 169

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +  +LR+      +  + DN+     +   +   K+ AF +S     +AG  F  +  
Sbjct: 170 LLLYFFLRKVPFGRYFYAVGDNEDGARLIGIPVNKVKICAFIISGISAALAGCIFVMNIG 229

Query: 255 RISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            I        E  ++ + V+      GG  SL   A     L  +      +    F + 
Sbjct: 230 FIPNQTGTGLELQVIAAAVLGGIHLKGGTGSLFGAALGALFLETISSSLVFLKIPAFWNN 289

Query: 310 LKFDCSFNMRHTT 322
                   +    
Sbjct: 290 AISGFLLLLIVIL 302


>gi|307718525|ref|YP_003874057.1| transporter [Spirochaeta thermophila DSM 6192]
 gi|306532250|gb|ADN01784.1| transporter [Spirochaeta thermophila DSM 6192]
          Length = 334

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/327 (10%), Positives = 95/327 (29%), Gaps = 25/327 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L +++ IL LL +   ++  +        + + +         + A  +++V+   G + 
Sbjct: 14  LQRWEVILSLLLLAIMVVNGILSPYFWDVRNLFNTTFNFTEKSIIALSMALVI-ITGSID 72

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++     A+ ++   ++ S       +++    + + A  +   L               
Sbjct: 73  ISVGSIVALSSFCMGLVASYGAPVPVIVLVGLLVGTAAGMLNGFLVGYLR---------- 122

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                    +          +      +         +    F +     +    + + L
Sbjct: 123 ---------IPAIAVTIGTMSFFRGIPQGILGDKAFTTYPEEFAWLGQGYVGGTLVPFQL 173

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +    L+  + L L  T        +  N+ A           K + F ++  F G++  
Sbjct: 174 VLFLALALMVGLVLHYTVFGRMVYAVGRNEVAAVFSGIPSKRVKFAVFTLNGLFSGISSV 233

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
              +      P++ +  E   +   V     I GG   +  +  A+ ++  +      MN
Sbjct: 234 LLTSRILSTRPNIAQGFELEAITIAVLGGVAITGGFGGIPGVVIASFVIGFIRFGMGLMN 293

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALF 329
                  L       +       +A  
Sbjct: 294 VPGRVMNLVTGALLIVAIVIPEFMAFV 320


>gi|293393795|ref|ZP_06638102.1| xylose ABC superfamily ATP binding cassette transporter, membrane
           protein [Serratia odorifera DSM 4582]
 gi|291423622|gb|EFE96844.1| xylose ABC superfamily ATP binding cassette transporter, membrane
           protein [Serratia odorifera DSM 4582]
          Length = 381

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/355 (12%), Positives = 95/355 (26%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  +  +     F   GA  S + I ++  Q  I  + A G+  V+     + L+    
Sbjct: 20  MLAAIVAIMLFFTFTTEGAYLSARNISNLLRQTAITGILAVGMVFVI-VSAEIDLSVGSM 78

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM---- 129
             +   +  I     G  + L I V+ +     G   G      +     +    M    
Sbjct: 79  MGLLGGAAAIFDVWLGWPLPLTIVVTLLAGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 138

Query: 130 -------------------------------------SEIFQNILIKWKPITNGKAGIYV 152
                                                  +   +  +W+  +        
Sbjct: 139 GILIGITNGTTVAPTSSAMSQIGQSYLPDGLGFGFGALGLMLFVAWQWRRRSKRVQLGLP 198

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                   T               +     +   +L +  L  + +    RTA       
Sbjct: 199 VAAAGGDVTRQSITAVIVLGAVYLLNDYRGVPTPVLILTALMLTGMFMATRTAFGRRIYA 258

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N  A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 259 IGGNIDAARLSGVNVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 318

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 319 VIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGAILLLAVWM 373


>gi|289577508|ref|YP_003476135.1| inner-membrane translocator [Thermoanaerobacter italicus Ab9]
 gi|297543818|ref|YP_003676120.1| inner-membrane translocator [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|37549273|gb|AAQ93073.1| xylose ABC transport permease [Thermoanaerobacter ethanolicus]
 gi|289527221|gb|ADD01573.1| inner-membrane translocator [Thermoanaerobacter italicus Ab9]
 gi|296841593|gb|ADH60109.1| inner-membrane translocator [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 388

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/359 (12%), Positives = 96/359 (26%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  L  ++ +   L  G   S + +  +  Q+ I  + A G+ +V+   G + L+
Sbjct: 23  RSYTMILALLGIWIIFSILTHGDFLSPRNLSMLARQMSITAILASGMVLVI-VAGHIDLS 81

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL------- 122
                        IL   Y       I V+ M   A G+  G      +           
Sbjct: 82  VGSVAGFTGAIAAILQVIYHWDTVPTIIVTLMAGLAIGVWQGFWIAYRKVPAFIVTLSSM 141

Query: 123 ----------------------------------AIATLIMSEIFQNILIKWKPITNGKA 148
                                                 L +      +++  K   +   
Sbjct: 142 LVFRGGILLITKGVTISPLKQDFTVVGQGYIPPLFSVILAVVAGVLYVIMDLKNRNSRIK 201

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                         +  ++ F    +S +I    +   +L +  +   +    + T    
Sbjct: 202 YGLSVSSWGIELAKIAGVLIFIALFTSVMISYEGIPVPVLLVLVIVILLTFVAQNTTFGR 261

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N++A       I    ++ F +      +AG    +  +  +       E   
Sbjct: 262 YVYAIGGNKEAAAYSGINIAKTNMTIFLIMGVLSAIAGIVLTSRLNAATTSAGNLFELDA 321

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + S +I     LGG  ++        I+  +      MN  Y    +       +    
Sbjct: 322 IASAIIGGTSTLGGEGTVPGAILGALIMASIDNGMSLMNIDYSILTIVKGLVLVLAVWV 380


>gi|126440386|ref|YP_001057111.1| ABC transporter, permease protein [Burkholderia pseudomallei 668]
 gi|126219879|gb|ABN83385.1| ABC transporter, permease protein [Burkholderia pseudomallei 668]
          Length = 292

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 81/287 (28%), Gaps = 14/287 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S      +Y +   GL ++  + G+L+       A+GAY                 
Sbjct: 8   PYLISGLGVGAVYALSGVGLVVLYRASGVLNFAFGATGALGAYVAAACLDADYPQALAWG 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A  + A  +   + + +       +   + +  F  +L+ +     G     +    
Sbjct: 68  AAVAASTAASLVYGLVLAPRLAARE-RVVRSVATLGFALVLLGFCEWYWGDTPRRLVLPT 126

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                    +   +       +    M  + + +            RT +    R + ++
Sbjct: 127 DSEALDFGDVRFTYTRIVGLALACAMMAAIGVLLA-----------RTRLGLHMRALSND 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +     L   ++    +A+A+S  F G+ G   A                I   +  I+G
Sbjct: 176 RHLSGVLGIRVLSVDAAAWAISGVFAGITGLLLANLVRL--QAAVLTFLVIPAFAAAIVG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            + SL     A   +     L   +  +             +    +
Sbjct: 234 RLASLPATVAAGVAIGLAEALAITVPGFAPYRSATPFLIALVAMLFI 280


>gi|320450033|ref|YP_004202129.1| branched-chain amino acid ABC transporter permease [Thermus
           scotoductus SA-01]
 gi|320150202|gb|ADW21580.1| branched-chain amino acid ABC transporter permease protein [Thermus
           scotoductus SA-01]
          Length = 291

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 91/308 (29%), Gaps = 26/308 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+        +Y + A G  +V  +  +++        +GAY          L + +L 
Sbjct: 6   PYLIGGLANGALYGLLALGFVLVYRATSVVNFAIGEFLLVGAYLTYTFALFLPLPLAILA 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +         +  G            +A ++ +      L     +  G          
Sbjct: 66  ALPLAFLFGLLVERGFVRPLL--GRSVVAVIMATIGLAAALDGVVQLLWGPD-------- 115

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +   +    F +  +       + LL    L   ++  LRR+      R I + 
Sbjct: 116 ---LKYLSGSLPNLGFQAGGIFVSSRAVWNLLLALPLGLGLLFALRRSRYGILVRAISER 172

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  +L           + +S+    +AGA  AA+       +F     + V  + ILG
Sbjct: 173 EVAALALGIPTARILAGVWGISALLATLAGALLAAASGVGPNLVF---LGLKVFPVAILG 229

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+     A  IL  +  L             +      +    L+          R 
Sbjct: 230 GLDSVGGALLAGLILGVLEALSQRYLEPLLPGFTEALPFVVVLLVLLV----------RP 279

Query: 337 HSLLRLRT 344
           + LL  R 
Sbjct: 280 YGLLGERQ 287


>gi|253579181|ref|ZP_04856451.1| inner-membrane translocator [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849279|gb|EES77239.1| inner-membrane translocator [Ruminococcus sp. 5_1_39BFAA]
          Length = 340

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 92/319 (28%), Gaps = 12/319 (3%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I   + +    ++          +   ++ +     ++ A GL+IV+   G + ++    
Sbjct: 21  IALFVVMYVAGMIVFADKGFAKPQMFLNLFVSNAGLLVIACGLTIVM-ITGGIDISVGSV 79

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            A+       L    G++ +  + V+ +I  A G++ G            +    M    
Sbjct: 80  TALVCMVLADLMENKGVNAYAAVLVALLIGVAFGIVQGFLVAYLDIQPFIVTLAGM---- 135

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
                +          I + + L+      R  + F            ++   ++    +
Sbjct: 136 --FFGRGLTAIISTDMISIKNELFLKWANYRFYMPFGSTSKKGKFIPAYIPPTVVIALIV 193

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              I + L+          I  ++++   +   +     +A+ +     G+ G  F  + 
Sbjct: 194 VILIAVLLKYRKFGRKLYAIGGSRQSALMMGLNVKKTIFNAYVLDGFLAGLGGFLFCLNS 253

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                +  K  E   + S VI      GG+ +         I   +  L           
Sbjct: 254 CAGFVEQAKGLEMDAISSAVIGGTLLSGGVGTPIGTLFGVLIKGTISSLITTQGTLSSWW 313

Query: 309 LLKFDCSFNMRHTTLMVIA 327
                 +       +  + 
Sbjct: 314 TRIILSALLCFFIVIQSVV 332


>gi|145590696|ref|YP_001152698.1| inner-membrane translocator [Pyrobaculum arsenaticum DSM 13514]
 gi|145282464|gb|ABP50046.1| inner-membrane translocator [Pyrobaculum arsenaticum DSM 13514]
          Length = 320

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/322 (16%), Positives = 116/322 (36%), Gaps = 31/322 (9%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L +           +   I  ++      +I VG  G ++   V   A+GAY   +   
Sbjct: 11  LLLMALAFVFPEYSKLIASIAFFMALGQAGNIFVGLTGYVNFGFVAFLAMGAYGLGVTVY 70

Query: 87  RYGLSIWLLIPVSAMI----SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKP 142
                  L +PV  ++    + A   ++G  +L+ RG Y AIAT+ ++E  + +++    
Sbjct: 71  YITWLGILALPVGLLLGVGLAAALASVVGAIALRLRGAYFAIATIGVNEGVKYLIVGANI 130

Query: 143 ITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLR 202
              G                  S+ R F   ++  +  +    ++L    ++   +  ++
Sbjct: 131 WGGGA-----------GLILSSSMFRAFGRETALFLANVGSTVLILATGLIAVVAMYLIQ 179

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF--AASRDRISPDM 260
                 A   IR ++ A  ++       KL AF  S++  G+ GA +    +      ++
Sbjct: 180 AGKAGYALAAIRQDEDAAKAIGINPTKYKLLAFITSASLSGLLGAAYFSLGNMQIFPENV 239

Query: 261 FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           F     +  ++++ LGG T+++       I  GV  L                       
Sbjct: 240 FFVDYILDGLAVMFLGGATTVTGPIIGGLIYFGVRYLV--------------GIYLPGLQ 285

Query: 321 TTLMVIALFLVILMRSHSLLRL 342
             +  + +F+V++     ++  
Sbjct: 286 ALVTALIVFVVVVFMPKGIVGT 307


>gi|170718997|ref|YP_001784158.1| monosaccharide-transporting ATPase [Haemophilus somnus 2336]
 gi|168827126|gb|ACA32497.1| Monosaccharide-transporting ATPase [Haemophilus somnus 2336]
          Length = 322

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 95/303 (31%), Gaps = 27/303 (8%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           +         S+  + ++  Q  I ++ A G++ ++   G + L+      + A   ++ 
Sbjct: 33  VFSFIAPNFMSEANMMNIARQASINIVLAAGMTFII-LTGGIDLSVGSILGVTAVMALVC 91

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                L+ + +    A+++G    +     + + G    I TL      +          
Sbjct: 92  SLNPALADFAV--PIALVAGLGMGVFNGLLVAYAGLPPFIVTLGTYTALRGAAYLVAD-- 147

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                                +     F      Y   + ++++    + A     LRRT
Sbjct: 148 -----------------GTTVINSKISFDWIGNGYLGSIPWLVIIAFAVIAVCWFILRRT 190

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            +      +  N +A       +    +  +A S    G+ G   A+     + ++    
Sbjct: 191 TLGTHIYAVGGNLQAAHLTGIKVSLVLIFVYATSGLLSGLGGVMSASRLYSANGNLGVGY 250

Query: 265 ENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           E   + ++++     +GG+ +++       I+  +      M   YF  L+       + 
Sbjct: 251 ELDAIAAVILGGTSFVGGIGTITGTLIGALIIATLNNGMTLMGVSYFWQLVIKGGVIIVA 310

Query: 320 HTT 322
              
Sbjct: 311 VLI 313


>gi|307730839|ref|YP_003908063.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|307585374|gb|ADN58772.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
          Length = 335

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 72/278 (25%), Gaps = 27/278 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V  +++     +  S   I+++  Q+ I  + A G++ V+   G + L+     A
Sbjct: 40  FIGLLVVCIVMVFASDSFLSAANIENVLRQVSINAIIAVGMTCVI-LTGGIDLSVGSVMA 98

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +       L      ++  L    A+  G                         +  F  
Sbjct: 99  LAGTLAAGLMVAGMNALAALAIGVAVGLGFG---------------------AANGFFVA 137

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  I                                     + +   ++ M  +  
Sbjct: 138 FAGMPPIIVTLATMGIARGLALIYTGGYPIDGLPEWVSFFGSGKILGIQAPVVIMAVIYV 197

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              + L R         I  N++A       +   KL  + ++      A     A    
Sbjct: 198 IAWVLLERMPFGRYVYAIGGNEQATRLSGVRVARVKLIVYTIAGLTSSFAAIVLTARLMS 257

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKAT 288
             P+     E   + ++V     I GG  S+       
Sbjct: 258 GQPNAGVGFELDAIAAVVMGGTSISGGRGSIVGTLIGA 295


>gi|24113874|ref|NP_708384.1| putative transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|30063935|ref|NP_838106.1| putative transport system permease protein [Shigella flexneri 2a
           str. 2457T]
 gi|110806477|ref|YP_689997.1| putative transport system permease [Shigella flexneri 5 str. 8401]
 gi|24052970|gb|AAN44091.1| putative transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|30042191|gb|AAP17916.1| putative transport system permease protein [Shigella flexneri 2a
           str. 2457T]
 gi|110616025|gb|ABF04692.1| putative transport system permease protein [Shigella flexneri 5
           str. 8401]
 gi|281601948|gb|ADA74932.1| putative Ribose/xylose/arabinose/galactoside ABC-type transport
           systems, permease components [Shigella flexneri 2002017]
 gi|332754078|gb|EGJ84449.1| ribose transport system permease protein rbsC [Shigella flexneri
           4343-70]
 gi|332754156|gb|EGJ84525.1| ribose transport system permease protein rbsC [Shigella flexneri
           K-671]
 gi|332756258|gb|EGJ86609.1| ribose transport system permease protein rbsC [Shigella flexneri
           2747-71]
 gi|333000881|gb|EGK20452.1| ribose transport system permease protein rbsC [Shigella flexneri
           K-218]
 gi|333016199|gb|EGK35530.1| ribose transport system permease protein rbsC [Shigella flexneri
           K-304]
          Length = 332

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/317 (11%), Positives = 89/317 (28%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +     L          +  +  ++ GA    +             +ATL +    +
Sbjct: 88  AFVSVCLAFLLQ--FEVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALR 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                        +   I             + +    L M  L 
Sbjct: 146 GMGLFMTN-------------------ALPVPIDENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|13476367|ref|NP_107937.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14027128|dbj|BAB54082.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 337

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/315 (11%), Positives = 92/315 (29%), Gaps = 26/315 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L  +V  ++  L  G+  +   + ++  Q    ++ A  ++ V+ + G + L+     
Sbjct: 34  IALFFIVVCVVFSLVTGSFLTTPNLLNIVRQSAPLLIVAAAMTFVI-TTGGIDLSVGSVL 92

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +          +++ + A+ +    +     + +    ++     +      
Sbjct: 93  ALTATLSAVALQAGLPWPLVVVGMLALGAAIGALQGFFIAYERIPAFIVTLAGLSVIRGV 152

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +LI          G Y                 F   P   ++  + +           
Sbjct: 153 ALLIT---------GGYSIPVEPTSFFVNIGRAWFLGVPVPALLALVVL----------- 192

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A   L   +T        I  N +A         F  L  + +S      AG   AA   
Sbjct: 193 AIAYLAFNQTPFGRYVTGIGANAEAVRRAGVDTRFMTLFVYVLSGMAAASAGVILAARLG 252

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             S +  +  E  ++ ++V     + GG  ++         +  +       +   F + 
Sbjct: 253 SGSSNSGQGFELDVIAAVVLGGTSLFGGRGTIIGTVLGALTVAVIGNGLILAHMSPFLTP 312

Query: 310 LKFDCSFNMRHTTLM 324
           +       +      
Sbjct: 313 IVTGTIILVAIWLNF 327


>gi|84516704|ref|ZP_01004063.1| permease protein of sugar ABC transporter [Loktanella vestfoldensis
           SKA53]
 gi|84509740|gb|EAQ06198.1| permease protein of sugar ABC transporter [Loktanella vestfoldensis
           SKA53]
          Length = 371

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 96/308 (31%), Gaps = 23/308 (7%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I+  +AV    ++F       + + + +       +++ A G  +++   G   L+   
Sbjct: 29  AIVGTIAVFAFFIIFAGNSGMFNAQGVLNWSTVSAQFMIIAVGACMLM-IAGEFDLSVGS 87

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMS 130
                  S  I+    G  IW+ I ++  +  A G + G+  ++       + +A L + 
Sbjct: 88  MIGFAGMSIAIISVTLGWPIWVAILLTFALCIAIGALNGIIVVRTGLPSFIVTLAFLFIL 147

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY------ 184
             F     +         GI  A    +L       +    F     +  I ++      
Sbjct: 148 RGFTIFFPQLIERRTIIGGISEAAEGDWLAPLFGGKVGGGFFIWLGDLGVIEVFSRGTRA 207

Query: 185 ---------YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                     +++    L A   + L RT   N       + +A   +   +   K+  F
Sbjct: 208 GQPVVDGIPMLIIWALGLVAIAHIILTRTQFGNWIFAAGGDAQAARYVGVPVNRVKIQMF 267

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAI 290
             ++    +              D     E   +I++VI      GG  S+   A    I
Sbjct: 268 MFTAFCACVFATCQVIEFGSAGADRGLLKEFEAIIAVVIGGALLTGGYGSVIGAALGALI 327

Query: 291 LIGVVELC 298
              V +  
Sbjct: 328 FGVVQQGL 335


>gi|313499455|gb|ADR60821.1| Monosaccharide-transporting ATPase [Pseudomonas putida BIRD-1]
          Length = 331

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/313 (13%), Positives = 94/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    +   +L         S     ++  QI   ++ A G++ V+   G + L+     
Sbjct: 29  LAGALLAMIVLFSFLSSHFWSYGTFSTLANQIPDLMVLAVGMTFVLIIGG-IDLSVGSVL 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A +  +    +G  +     +   ++   G I G  ++ +R       +L + E+ +
Sbjct: 88  ALAASTVSVAILGWGWGVLPSALLGMAVAALAGSITGGVTVAWRIPSFI-VSLGVLEMAR 146

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +  ++        G   A     +   V                        +    + 
Sbjct: 147 GLAYQFTDSRTAYIGDAYAWFSNPVAFGVSP--------------------AFIIALLVI 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L L RT        I  N++A           K+  FA+     G+A  F  +  +
Sbjct: 187 VLAQLVLTRTVFGRYLIGIGTNEEAVRLAGIDPRPYKVLVFALMGLLAGLAALFQISRLE 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+        I+  +      +        
Sbjct: 247 AADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGASEPTKR 306

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 307 IITGAVIVIAVVL 319


>gi|331653980|ref|ZP_08354981.1| putative ABC transporter permease protein YphD [Escherichia coli
           M718]
 gi|331048829|gb|EGI20905.1| putative ABC transporter permease protein YphD [Escherichia coli
           M718]
          Length = 332

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/317 (11%), Positives = 89/317 (28%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +     L          +  +  ++ GA    +             +ATL +    +
Sbjct: 88  AFVSVCLAFLLQ--FEVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALR 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                        +   I             + +    L M  L 
Sbjct: 146 GMGLFMTN-------------------ALPVPIDENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|297190990|ref|ZP_06908388.1| ABC transporter sugar permease [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197721460|gb|EDY65368.1| ABC transporter sugar permease [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 353

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 81/267 (30%), Gaps = 14/267 (5%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
           A      + ++        + A  +++++   G   L+  +     A    +   +   +
Sbjct: 55  AFLRTSSLATVLYAASTLGIMAVPVALLM-IGGEFDLSAGVMVTSSALISSMFSYQMTAN 113

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           +W+   VS +++   G   GL   + +     I  L    +   + +    + +G     
Sbjct: 114 VWVGALVSLLVTLGLGAFNGLMLTRTKLPSFIIT-LGTFLMLTGLNLGLTKLISGTVSTK 172

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
               +    +       F    ++     ++   ++       A     L RT   N   
Sbjct: 173 SIGDMEGFPSAKSVFGEFTVGDTTVKATIVWWIVLI-------ALATWILLRTRFGNWIF 225

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +     A  ++   +   K+  +   +    ++G     S D +       +E   +I+
Sbjct: 226 AVGGGADAARAVGVPVKRTKILLYMGVAFAAWVSGQHLLFSFDVVQSGEGVGNELTYIIA 285

Query: 272 IV-----ILGGMTSLSKIAKATAILIG 293
            V     I GG  S    A    I   
Sbjct: 286 AVIGGCLITGGYGSAIGSAVGALIFGM 312


>gi|294632179|ref|ZP_06710739.1| sugar ABC-type transport system, permease component [Streptomyces
           sp. e14]
 gi|292835512|gb|EFF93861.1| sugar ABC-type transport system, permease component [Streptomyces
           sp. e14]
          Length = 349

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/320 (11%), Positives = 93/320 (29%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L++ +    + AV   +              + ++        + A  +++++   G   
Sbjct: 26  LSRPELGSVVGAVAVLVFFAFAADGFLRASSLSTVLYASSTIGIMAVPVALLM-IGGEFD 84

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +     A    +   +    +W+ + VS +++ A G   G    + +     I  L
Sbjct: 85  LSAGVMVTSSALISSMFSYQMTADVWVGVGVSLLVTLAIGAFNGFMLTRTKLPSFIIT-L 143

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               +   + + +  + +G         +                        I  +  L
Sbjct: 144 GTFLMLTGMNLGFTKLIDGTVSTKTIGDMEGFPAAHAVFASTIGIGGVDFKVTILWWLGL 203

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +            RT   N    +  NQ+A  ++   ++  K+  +   +    ++G 
Sbjct: 204 VLLASWILL------RTRTGNWIFAVGGNQEAARAVGVPVVRTKIGLYMGVAFGAWISGQ 257

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
               S D +       +E I +I+ V     I GG  S    A    +   V +      
Sbjct: 258 HLLFSFDAVQSGEGVGNELIYIIAAVIGGCLITGGYGSAVGSAVGALLFGMVSKGIVFAE 317

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
           +              +    
Sbjct: 318 WNPDWFKFFLGAMLLLATLL 337


>gi|332296923|ref|YP_004438845.1| ABC-type transporter, integral membrane subunit [Treponema
           brennaborense DSM 12168]
 gi|332180026|gb|AEE15714.1| ABC-type transporter, integral membrane subunit [Treponema
           brennaborense DSM 12168]
          Length = 312

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/281 (10%), Positives = 74/281 (26%), Gaps = 25/281 (8%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
              ++     S+  Q  +  + A+G++ V+   G + L+      + A     +      
Sbjct: 32  PEFRTVNNALSLLRQSAVNGLIAFGMTFVI-LTGGIDLSVGSVLCLTALLCAGMIKAAVP 90

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
               L+   A+      +   +                        L  +          
Sbjct: 91  VPAALLLAFALGIVLGFLNGLMIVKGR-------------------LQPFIATLVSMTAY 131

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                +Y  G  V  L +          + + +   +  +  +    +  L++T      
Sbjct: 132 RGIGMIYSNGRPVSDLGQSALLAGLGKGHFLGIPVPVWILLIVFFIFLFILQKTVFGRQV 191

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N KA      +        + +S A   +AG    +      P M    E   + 
Sbjct: 192 YAVGCNPKAAALAGISTGRVTYLVYVISGAAAAVAGLILVSRLGSAQPTMGSGYELDAIA 251

Query: 271 SIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
           ++      + GG   +        I+  +      +    +
Sbjct: 252 AVALGGTSMSGGRGRILGTLTGVLIIAILNNGMNILGISSY 292


>gi|15603140|ref|NP_246212.1| hypothetical protein PM1275 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12721634|gb|AAK03359.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 330

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/308 (11%), Positives = 91/308 (29%), Gaps = 28/308 (9%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +  + A+     L    G+    + +  +     I ++ A G + V+     + ++    
Sbjct: 11  LTIVFAIGLLFTLLSLGGSGFHLQTLAMIFNSAQIVILLAIGATFVI-LTRNIDVSVGST 69

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             + A     L +    +   +I +   +       + +  L+       + TL + +  
Sbjct: 70  MGLCAVIAGSLLNAGFGASAFVITLCCGLLAGLFNGILVTLLRIPAIVATLGTLGLYKGI 129

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             ++   K I      +       FL  +    +       +                  
Sbjct: 130 MLLITGGKWIEGLPQDLKTLSAPAFLHISPIGWLLLGLIGLT------------------ 171

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
                 +L +      +  + DN +    L   +   +++AFA++     +AG  FA+  
Sbjct: 172 ----YFFLTKMKAGRDFYAVGDNLQGALQLGVRVNQVRIAAFAINGTMAALAGIVFASQI 227

Query: 254 DRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
             +        E   + + V     +LGG  ++         LI +  +   +    + +
Sbjct: 228 GFVPNSTGNGLEMKAIAACVLGGISLLGGAGNIIGAVLGAYFLIQIDSILVLLKVPAYWN 287

Query: 309 LLKFDCSF 316
                   
Sbjct: 288 NFVAGLVL 295


>gi|307546826|ref|YP_003899305.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307218850|emb|CBV44120.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 374

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 78/302 (25%), Gaps = 21/302 (6%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            +   + V+   ++        +   I +         + A   ++++   G   L+   
Sbjct: 36  ALAGTVLVLAFFIVAASGTGMFTPAGIVNFLEVAAQLGIIATAAALLM-IGGEFDLSIGS 94

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
              +      I    YG  +W  I ++   +   G I G    K         TL    I
Sbjct: 95  MIGLAGILIAIPAVEYGWPLWAAIILAFSCAALVGWINGNLVNKTGLPSFI-VTLGFLFI 153

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTT--------------VRSLIRFFRFPSSFVI 178
            + + I    +  G+  I                            +   +     +   
Sbjct: 154 LRGLAIGISRLLTGRTQIGGIHDHIPGDWFAALFSGEVATGLFSWMASQGWIATNFAGNP 213

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
               +   ++    L+A     L  T   N       +  A  +    +   K+S F  +
Sbjct: 214 VVTGIPVSIVWWLALTALATWVLLCTPYGNWIFASGGDANAARNSGVPVHRVKISLFMFT 273

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIG 293
           +    +                    E   +I++VI      GG  S    A    I   
Sbjct: 274 ALSATVFACLQVMDTGSADTIRGLLKELEAIIAVVIGGALLTGGYGSAIGAALGALIFGL 333

Query: 294 VV 295
           V 
Sbjct: 334 VQ 335


>gi|218515904|ref|ZP_03512744.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           8C-3]
          Length = 389

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/248 (10%), Positives = 74/248 (29%), Gaps = 18/248 (7%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
              + +  ++  L L +   +  + K + ++   +    + A G+++V+   G + L+  
Sbjct: 25  TFWVLIAVILACLFLSVATDSFATAKNLYNITRNVTFVAIIALGMTLVI-ITGGIDLSVG 83

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               + +    +                 + +     ++          YL     +++ 
Sbjct: 84  SVLCLCSMVLAVTMHAGYG------IEIGIAAAIGTALLVGAFNGVMIAYLDFPPFVVTL 137

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
              ++      +            ++  G     L+          I    +Y V+L + 
Sbjct: 138 GMLSVARSLAMV------ASNNTVVFQFGPDHDKLLALGGGAWFLGIANPVLYMVILALL 191

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                     R T        I  N+ A       +   K++ + +S+   G+AG     
Sbjct: 192 TGFVL-----RWTRFGRYIFAIGGNEHAATLTGVPVRSIKVAVYMISALSAGIAGIVQTG 246

Query: 252 SRDRISPD 259
               ++ +
Sbjct: 247 WLGAVTTN 254


>gi|49479580|ref|YP_037038.1| sugar ABC transporter permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|225864939|ref|YP_002750317.1| putative ribose ABC transporter, permease protein [Bacillus cereus
           03BB102]
 gi|49331136|gb|AAT61782.1| sugar ABC transporter, permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|225788812|gb|ACO29029.1| putative ribose ABC transporter, permease protein [Bacillus cereus
           03BB102]
          Length = 338

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/331 (13%), Positives = 102/331 (30%), Gaps = 33/331 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +++ +L +L ++  +L  L      +   +       L   + A  ++ V+   G + ++
Sbjct: 15  RWEGVLIVLLLIEFILFSLINSDFLNISNLLFSTNDFLFIAIAAIPMTFVI-VTGGIDVS 73

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 + +    +L       ++ +I    +   A  +   +  +      +     + 
Sbjct: 74  VGSIMGLTSILIGVLWMNGISILFAVIISLIISCLAGALNGLIIKMTDVEPLVVTLGTMF 133

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 ++I      +G  GI                     F        I +  +L  
Sbjct: 134 LYGGIALVISGGAGASGYEGISGLP---------------DAFVQLASGSFIGIPNLLWL 178

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+    +   RT      +    N+ A            + A+ +S    G+ G F 
Sbjct: 179 LIVLTVLCAVLFHRTIYGRHVKLTGANENAAKYTGIKTKKVVIIAYMLSGLGGGLGGTFL 238

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            A       DM   +   I+ ++V     I GG  S+     A+  +  +          
Sbjct: 239 TAYFGSARADMGSETILPIITAVVLGGTLITGGKGSIIGTVLASIFIGLMQ--------- 289

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
                L+     N +   ++ I L L ++MR
Sbjct: 290 ---YGLQMTGLTNEQSNVVIGIILILSVIMR 317


>gi|72080572|ref|YP_287630.1| putative ribose ABC transporter [Mycoplasma hyopneumoniae 7448]
          Length = 330

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 98/323 (30%), Gaps = 27/323 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            K+L L  ++  +   L +    S  +  ++    +     A G ++V+   G + L+  
Sbjct: 14  TKLLILFLIIAFITGALNVNFFSSYNWFVAILKNNIFIGFIALGQTLVI-LTGGIDLSVG 72

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                GA  Y++L  + GL    ++ +  +I  A G++ G+   KF+     +    +  
Sbjct: 73  SLIGFGATIYLLLTVKLGLHFVAVLFILIIILAAIGILNGILISKFKIPPFIVTLAGLLS 132

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +   I I  K                    T  +  +   F             ++L   
Sbjct: 133 LRGAIAILLKG-------------------TPITNAQDPIFNFFNYNLGSNFSVLVLVFI 173

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
              A +I +++ +        + DN  A            +  +  S  F  +     ++
Sbjct: 174 ITVAVLIFFIKFSKFGRYVYAVGDNPVAATFSGIKNNKILILVYMFSGIFAILGALSISS 233

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               +SP+     E   V ++V       L   A           +          +   
Sbjct: 234 GTTSVSPNTGYGFELDTVTAVV-------LGGTALTGGKGGVGKTIIGWFAMALLLNTFS 286

Query: 312 FDCSFNMRHTTLMVIALFLVILM 334
           F    +        I + L IL 
Sbjct: 287 FFQLDSNFRLVAKGIIIVLAILF 309


>gi|56698118|ref|YP_168490.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
 gi|56679855|gb|AAV96521.1| branched-chain amino acid ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 328

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/325 (11%), Positives = 99/325 (30%), Gaps = 33/325 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---------------- 82
           I +  +  ++Y + A G  ++  + G+ +    +     A + V                
Sbjct: 12  ILNGLMAGVLYALVALGFVLIYKASGIFNYAQGVMALFAAMTLVGIMNGQVPFSHLINAV 71

Query: 83  ----ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               I    + +  ++ I ++  +       +    ++       I   + +      L 
Sbjct: 72  FGGHITHFGWNVPGFVAILLTMAVMVLLAWAVQQFVMRHLVGQEPIILFMATIGLAYFLE 131

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +  G     +   L            +  F   F I  + +    +    L A+++
Sbjct: 132 GVADLMWGSEIKTLDVGLPQGLNVWIDDTTYGIFGYGFFIDNLDI-VATVIAALLVAALV 190

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
            + + T    A R + D+ +A  S+  ++ F  +  ++V+     +AG  +         
Sbjct: 191 AFSQYTKQGRAMRAVADDHQAALSVGISLNFIWVLVWSVAGFVALVAGIMWGTKSGVQFS 250

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                   +  + +++LGG TS+        I+    +L             +   +   
Sbjct: 251 LS---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFAIGPMVGGATENWFA--- 304

Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343
                  +   + ++ R   L   +
Sbjct: 305 ------YVLALIFLVFRPQGLFGEK 323


>gi|88799289|ref|ZP_01114868.1| ABC transporter, membrane spanning protein (sugar) [Reinekea sp.
           MED297]
 gi|88778048|gb|EAR09244.1| ABC transporter, membrane spanning protein (sugar) [Reinekea sp.
           MED297]
          Length = 402

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/368 (11%), Positives = 90/368 (24%), Gaps = 57/368 (15%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +L  L V+     FL  G       + ++ +Q    ++ A G+ ++V   G + L+
Sbjct: 28  REYGMLIALVVIMLFFQFLTDGVLLKPLNLTNLVLQNSYIIIMAIGM-LLVIVAGHIDLS 86

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                        +L   +  ++   + V     G  G   G     +R     +    M
Sbjct: 87  VGSVVGFIGALAAVLMVNFDWAVVPTVVVCLATGGLIGAAQGYWIAYYRIPAFIVTLAGM 146

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV--- 186
                  L      + G                +     F        +  I   ++   
Sbjct: 147 LVFKGLTLALLNGQSVGPFPETFQRLSSGFIPDLFGEGGFHMTSFLIGLALIAFLFITGY 206

Query: 187 ----------------------------------------------LLGMCFLSASIILW 200
                                                         L+ M  L ++   +
Sbjct: 207 KTRQKQIAHQIAVEPFKFFLIKNAILSVAAGYILYLLSTYKGLPNVLIIMALLVSAYTFF 266

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             ++        I  N+KA               F        +AG  FAA  +  +P  
Sbjct: 267 TNKSTTGRRIYAIGGNEKAAMLSGINTKRLTFLTFVNMGVLAALAGMVFAARLNTATPKA 326

Query: 261 FKFSENIIVISIVILGG------MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
              +  + VI+ V +GG      +  ++       ++  +      M        +    
Sbjct: 327 -GLAFELDVIAAVFIGGASMQGGVGKVTGAVIGALVMGVMNNGMSIMGIGIDWQQVIKGL 385

Query: 315 SFNMRHTT 322
                   
Sbjct: 386 VLLAAVIF 393


>gi|254440891|ref|ZP_05054384.1| amino acid or sugar ABC transport system, permease protein,
           putative [Octadecabacter antarcticus 307]
 gi|198250969|gb|EDY75284.1| amino acid or sugar ABC transport system, permease protein,
           putative [Octadecabacter antarcticus 307]
          Length = 343

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/342 (12%), Positives = 101/342 (29%), Gaps = 48/342 (14%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS------------------ 80
             +   +   Y + A GL+I+ G+LG+++      + +GA+                   
Sbjct: 8   FLNGLDKGSAYALIALGLTIIFGTLGVVNFAHGALFMLGAFCAVITSKILSASHKIVDAT 67

Query: 81  -------------------YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
                              + +   +  +   + I +   +     +   +     +  Y
Sbjct: 68  RTDFLGNPMQVDTFYVQDWFGMAAGQTIMDWAVPIAILFAVPVMIFVGFAMERGLIKHFY 127

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                  +   F   L+  + I        +        T       F  + +  ++Y  
Sbjct: 128 KRPHADQILVTFGLALVIGEIIKYFFGANPIQTPAPPAFTGSLDFGVFLGYEAQTIMYPY 187

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
           +          + A++  +L+ T      R    +++    L   I       F +++A 
Sbjct: 188 WRLVYFSFSAVIIAAVFAFLQFTTFGMVVRAGMADRETVGLLGIDIDKRFTFMFGLAAAV 247

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AG  +A            F     V+ +V    M SL     A  +L  +       
Sbjct: 248 AGVAGVMYAPIVAPNYFMGMDFLVLSFVVVVVGG--MGSLPGAVAAGFLLGILES----- 300

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
               F S+          +  ++ +   +++L R   L+  +
Sbjct: 301 ----FASMPVVIDLLPGINQIIIYLVAIVILLTRPRGLMGRK 338


>gi|26248910|ref|NP_754950.1| ABC transporter permease [Escherichia coli CFT073]
 gi|227887578|ref|ZP_04005383.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Escherichia coli 83972]
 gi|306814390|ref|ZP_07448552.1| putative sugar transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli NC101]
 gi|26109316|gb|AAN81518.1|AE016764_200 Hypothetical ABC transporter permease protein yphD [Escherichia
           coli CFT073]
 gi|222034251|emb|CAP76992.1| ABC transporter permease protein yphD [Escherichia coli LF82]
 gi|227835928|gb|EEJ46394.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Escherichia coli 83972]
 gi|305851784|gb|EFM52236.1| putative sugar transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli NC101]
 gi|307554564|gb|ADN47339.1| putative sugar ABC transporter [Escherichia coli ABU 83972]
 gi|312947117|gb|ADR27944.1| putative sugar transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315292482|gb|EFU51834.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 153-1]
          Length = 332

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/317 (11%), Positives = 97/317 (30%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +         + L   + + ++ ++    G +MG  +   RG +   + +    ++ 
Sbjct: 88  AFVSVCLA-----FLLQFDVPLAIACLLVLLLGALMGTLAGVLRGVFSVPSFVATLGLWS 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +TN                 +   I             + +    L M  L 
Sbjct: 143 ALRGMGLFMTNA----------------LPVPINENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|33595273|ref|NP_882916.1| putative branched-chain amino acid transport system permease
           protein [Bordetella parapertussis 12822]
 gi|33565350|emb|CAE36153.1| putative branched-chain amino acid transport system permease
           protein [Bordetella parapertussis]
          Length = 291

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/281 (11%), Positives = 78/281 (27%), Gaps = 13/281 (4%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           LI  + + G ++ +G   +++           Y+  +L    G++ +L + +   ++ A 
Sbjct: 19  LILALLSTGFNLALGVSRVVNFQHGAVVLWSMYAAYVLWEATGINPYLGLLLIVPVAFAI 78

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G  +    +         + ++ S                                +   
Sbjct: 79  GYFLHRWLIIRSLQTPEDSQILFSIGLLIAFQYLAQFVYSTDARS-----------LTEE 127

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                     VI +            +   + L L RT +         N          
Sbjct: 128 SLQHSLIIGPVILQYTRLAAAAVSLLVLVLLHLMLTRTDLGRKLHACAQNPVGARVAGLN 187

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +      A  +++A   ++G   A            F  ++  + + +LGGM S+S    
Sbjct: 188 VEHLSAVALGIAAACAAVSGTALATMAPIFPERA--FEYSLAAVVVSVLGGMGSMSGSIL 245

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
              I+  ++ +            + +   F +       + 
Sbjct: 246 GGLIVGVIIAVSQVTGHGDLALAIVYALVFLIFLVHPTGLI 286


>gi|13471799|ref|NP_103366.1| permease protein of ribose ABC transporter [Mesorhizobium loti
           MAFF303099]
 gi|14022543|dbj|BAB49152.1| permease protein of ribose ABC transporter [Mesorhizobium loti
           MAFF303099]
          Length = 350

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/315 (13%), Positives = 92/315 (29%), Gaps = 8/315 (2%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           ++    L +L V+  ++L +      ++++I +     +   + A   ++ +   G + L
Sbjct: 23  DRPLVPLIILLVILVVILQILRPGIVNERWIANTIKFAIPLAILAGCQTMTM-LTGGIDL 81

Query: 69  NCVIAYAIGAYSYV--ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
           +      + A+     I+     ++  L +  + +I    G+ +G+  +      L  + 
Sbjct: 82  SVGTVATMSAFIMATQIVNQDPAVAFLLAMMPAVLIGLVNGIGVGVFRVHPLIMTLGTSL 141

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           +    +                 +                    R   +           
Sbjct: 142 IGTGCLQVYQRTVIASGAKIPDFLAWLGTGVTRLPDAWVPSEAARQWLTDAGIGFSFPNA 201

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           LL    L+A I+  L RT        + DN+ A             + +  SS   G+ G
Sbjct: 202 LLLYVPLAALIVFTLARTGFGRLLYAVGDNEHATRLSGVQYWQVITALYVTSSLLAGITG 261

Query: 247 AFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
             +       S  + +      V + V     I GG    +       IL  +  L   +
Sbjct: 262 LLYIGLIKAPSLSLAEPLVLPSVAAAVIGGTSIFGGRGGYTGTIVGALILTVLTTLLTIL 321

Query: 302 NFYYFNSLLKFDCSF 316
                   + F    
Sbjct: 322 QMPEGARRILFGLIV 336


>gi|323466222|gb|ADX69909.1| Sugar ABC transporter permease protein [Lactobacillus helveticus
           H10]
          Length = 318

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 74/270 (27%), Gaps = 2/270 (0%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G++++       +GA++ +I    +        P    + GA   ++      F    L
Sbjct: 34  SGVVNIGLEGIMTVGAFTSIIFNLTFAQDFGTATPWLGALVGAIFGLIFSLLHAFATINL 93

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
               +I   +   +                            ++      P    I+   
Sbjct: 94  HADHIISGTVLNLLAPPLGVFLIKAIYEKGQTPNITANFGYTNIPGLADIPVIGKIFFTN 153

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
                     ++  +   L +T I    R+  +N +A  +L   +   +     +S    
Sbjct: 154 TSAPAWLAIIITVLLWWILYKTRIGLRLRSTGENPQAADTLGVNVYKMRYIGVLISGFMA 213

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+ GA FA S            +  + ++ VI  G  +      ++            + 
Sbjct: 214 GLGGAVFAQSISGNFSISTIVGQGFMALAAVIF-GKWNPIGAMLSSLFFGFAQS-LSIIG 271

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
                          +    + +I L + +
Sbjct: 272 NQLPGFEKIPTVYMQIAPYVITIIVLVIFL 301


>gi|218295356|ref|ZP_03496169.1| inner-membrane translocator [Thermus aquaticus Y51MC23]
 gi|218243988|gb|EED10514.1| inner-membrane translocator [Thermus aquaticus Y51MC23]
          Length = 291

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 88/308 (28%), Gaps = 26/308 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+        +Y + A G  +V  +  +++        +GAY          L + +L 
Sbjct: 6   PYLIGGLANGALYGLLALGFVLVYRATSVVNFAIGEFLLVGAYLTYTFALFLPLPLAILA 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +         +  G        +   +A ++ +      L     +  G          
Sbjct: 66  ALPLAFLFGLLVERGFVRPLLGRN--VVAVIMATIGLAAALDGGVQLLWGPD-------- 115

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +   +    F    V       + LL    L   ++  LRR+      R I + 
Sbjct: 116 ---LKYLPGSLPDLGFAMGEVFVPSRAVWNLLLAVPLGLLLLFLLRRSRYGVLVRAISER 172

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  +L           + VS+    +AGA  A +       +F     + V  + ILG
Sbjct: 173 EVAALALGIPTARILAGVWGVSALLATLAGALLAVASGVGHNLVF---LGLKVFPVAILG 229

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ S+     A  +L  +  L             +      +    L           R 
Sbjct: 230 GLDSVGGALVAGFLLGALEALSQRYLEPILPGFTEALPFVVVLLVLLA----------RP 279

Query: 337 HSLLRLRT 344
           + L   R 
Sbjct: 280 YGLFGERQ 287


>gi|163761265|ref|ZP_02168341.1| ribose ABC transporter, permease protein [Hoeflea phototrophica
           DFL-43]
 gi|162281604|gb|EDQ31899.1| ribose ABC transporter, permease protein [Hoeflea phototrophica
           DFL-43]
          Length = 358

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/317 (12%), Positives = 97/317 (30%), Gaps = 8/317 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
              L +   +   +F       +    +   + I  + A G++  +  +G   L+     
Sbjct: 37  FLALLLGLVIFFSVFANGFAGPRSAVFIFQSVAITGILALGVTCTL-VVGGFDLSIGSVA 95

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
                    +      S ++ I     +    G++ GL  +K +   L +ATL M  +  
Sbjct: 96  TSSMMLSAYMMVVLEQSAFVAILACLAMGAFIGLVNGLLIVKTKIPDL-LATLGMMFLLV 154

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +        +   G+ + D     G      +   R    F++  + +   ++ +  + 
Sbjct: 155 GLQRIPTEGRSIAMGMTLPDGSTAEGVFSPLFLSLGRHRFDFMLENL-LPAPVIFLIIIG 213

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS-- 252
             +  +L  T        I  N++A     T +   K+ A+ +S     + G   AA   
Sbjct: 214 ILVWGFLELTRHGRLMYAIGSNERAASLTGTNVNNYKILAYMISGVLASVGGMLLAARLG 273

Query: 253 ---RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
                  +  +       ++   V+     +    A     +  +++    MN  Y+   
Sbjct: 274 RGDIASGTNLLLDAVAAALIGFAVLGAAKPNAFGTAMGALFVGILLQGLTMMNAPYYTQD 333

Query: 310 LKFDCSFNMRHTTLMVI 326
                   +       +
Sbjct: 334 FIKGLVLVIALVFTFSL 350


>gi|121609038|ref|YP_996845.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121553678|gb|ABM57827.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 333

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/319 (12%), Positives = 99/319 (31%), Gaps = 28/319 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
             +     L   +      +   + ++  QI  + + + G+ +VV   G + L+     A
Sbjct: 34  LFILAGLVLAASMVSADFFTAPNLSNISRQIAGFGIMSMGMLLVV-LTGGIDLSIGSVAA 92

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             +    +L   +GL + L+  +   ++                  L    LI +     
Sbjct: 93  FSSVVTAMLIPGHGLGMGLMAGLGTGLACG----------------LINGLLIANYRLSP 136

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            ++    +T  +    +      +       +      ++ +   +    +LL  C  + 
Sbjct: 137 FVVTLAMMTVARGLALMVSHGAPILVDETGALLLDFGRATLLHIPLPTALMLLVFCAGAL 196

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +      T      R +  N++A       +    L  + VS A   +AG    A    
Sbjct: 197 FLGW----TRPGRIVRAVGSNEEAVRLSGVPVGRHVLLTYLVSGALASVAGIISTARAG- 251

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           +        + + VI+ V++GG       + A      +  L   +      +++     
Sbjct: 252 VGAPTVGVGDELTVIAAVVIGG------ASLAGGRGNVLNTLVGVVILGVIANIMNLASV 305

Query: 316 FNMRHTTLMVIALFLVILM 334
                  +M + +   IL+
Sbjct: 306 PGYHQQVVMGVIILAAILV 324


>gi|320007454|gb|ADW02304.1| inner-membrane translocator [Streptomyces flavogriseus ATCC 33331]
          Length = 350

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 90/295 (30%), Gaps = 25/295 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +L +LAV+  +       A      +  +  Q  +  +   G++ V+   G + L+
Sbjct: 43  RNLSLLGVLAVLIAVGGITEPDAFLDTGNLQLILTQSSVIGVVTVGVTFVI-ISGGIDLS 101

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+   S            +  I  +A++ G    ++    + + G    IATL M
Sbjct: 102 VGAMVALA--SVWATTLATQEYGFAGILFTAVVVGLAAGLVNGLLISYGGMVPFIATLAM 159

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
               + + ++                    G T    ++          Y + +  ++L 
Sbjct: 160 LASARGLALQITD-----------------GKTQIVTVQSVLDLGLPDSYVLGIPPLVLV 202

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              ++ +  L L RT        +  N +A       +   +L  + +S    G+A    
Sbjct: 203 FAAVTVAGWLILNRTTFGRRTVAVGGNAEAARLAGIDVRRQRLYLYLLSGLCCGIAAFML 262

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
                          E   + + +I      GG  ++        +   +  +  
Sbjct: 263 VILSGSGQNTNGNLYELDAIAAAIIGGTLLSGGRGTIVGSVLGVLVFTTITNIFA 317


>gi|296269686|ref|YP_003652318.1| inner-membrane translocator [Thermobispora bispora DSM 43833]
 gi|296092473|gb|ADG88425.1| inner-membrane translocator [Thermobispora bispora DSM 43833]
          Length = 344

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 91/293 (31%), Gaps = 13/293 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            + A+             +S   + +         + A  +S+++   G   L+  +   
Sbjct: 28  VVGAIAVFGFFAAQSPVFRSADGVANWLDPASTLGIMAVAISLLM-IGGEFDLSAGVLTG 86

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
                 V L ++ G ++W  +  S  ++   G + GL  ++ +     +       +   
Sbjct: 87  TCGLIVVTLATQAGWNVWAAMLASLAVALLIGFLNGLLVVRTKLPSFIVTLGTFLMLQGL 146

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L   K +T       + D   +             F  S  I        +L    ++A
Sbjct: 147 NLGVTKALTGTVQVGGLRDASGYESAHA-------VFAGSVTIGGTDFRIAILWWLAVTA 199

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L RT   N    +  +++A  ++       K++ F  ++    + G+  A     
Sbjct: 200 IATYVLTRTRPGNWVFAVGGDERAARAVGVPAARVKIALFMTTAGAAWLVGSILALRFAS 259

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
           +  +     E I +++ VI      GG  S    A    I     +      +
Sbjct: 260 VQANAGIGQEFIYIVAAVIGGCLLTGGYGSPVGAAIGALIFGMADKGIVFAGW 312


>gi|238893524|ref|YP_002918258.1| sugar ABC transport system permease component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|288936720|ref|YP_003440779.1| inner-membrane translocator [Klebsiella variicola At-22]
 gi|330004438|ref|ZP_08304934.1| branched-chain amino acid ABC transporter, permease protein
           [Klebsiella sp. MS 92-3]
 gi|238545840|dbj|BAH62191.1| sugar ABC transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|288891429|gb|ADC59747.1| inner-membrane translocator [Klebsiella variicola At-22]
 gi|328536623|gb|EGF62948.1| branched-chain amino acid ABC transporter, permease protein
           [Klebsiella sp. MS 92-3]
          Length = 343

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 97/326 (29%), Gaps = 25/326 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFL-----GATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           ++ K   I  ++ V+                  +   +  + +Q+ I  + A G++ V+ 
Sbjct: 24  KMPKDTGIFVVMLVIALTFEIAGWYVRDQSFLLNTNRLVLIVLQVAIIGIIAVGVTQVII 83

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           + G + L+              + +   +    L   S  +S     ++ LP++      
Sbjct: 84  TTG-IDLSSG-----------SVIALAAVVAASLAQTSDSLSPMFPALVNLPAVIPICAG 131

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           + +  L        +     P      G+ V+ R      T  + I F     + +    
Sbjct: 132 IGVGLLCGLTNGFLVTRTGIPPFIATLGMMVSARGLAQYYTQGNPISFLSDSFTAIGQGA 191

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
               +   +    A   + L+ T        I  N  +       +    +  + ++ A 
Sbjct: 192 MPVIIFFVIA---AVFHIALKHTRYGKYVYAIGGNMTSAKVSGINVNKYLVIVYTIAGAL 248

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+AG   AA        M    E   + + VI     +GG+  ++       IL  +  
Sbjct: 249 SGLAGVVLAARVSSGQSSMGMSYELDAIAAAVIGGSSLMGGVGRITGTLIGAMILGLIKS 308

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               +    +   +          T 
Sbjct: 309 GFTFVGVDAYVQDIIKGIIIVAAVTI 334


>gi|227820396|ref|YP_002824367.1| ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227339395|gb|ACP23614.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 330

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 92/307 (29%), Gaps = 36/307 (11%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             S  Y+           + A G+ IV+  LG + L+      +GA              
Sbjct: 47  FLSPDYLLQQLKVASFLGVVAAGMMIVI-LLGHIDLSVPWVMTMGAMMACAAAGFGPAGA 105

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           ++ IPV  +   A G++ G      R       ++I++     +      +  G      
Sbjct: 106 FVAIPVGVLSGMAFGLLNGFGVAYLRIP-----SMIVTLASNVVAQGLMVVYTGGFSPQD 160

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
           +                     +       +   +L    +SA+++  L RTA   A   
Sbjct: 161 SAPPAIRW-------------LATGALVPGVPNAILVWFAVSAAMVFLLTRTAFGRAVYG 207

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I ++++A F          + AF  S       G   A    + +  M        + ++
Sbjct: 208 IGNSERAAFLSGVGTRRVIMIAFVFSGGLSAFGGVLLAGYASKAAQAMGDAYLLPSIAAV 267

Query: 273 V-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           V     ILGG  S         ++  +  +   M                     +  + 
Sbjct: 268 VLGGTSILGGRGSYLGTVAGVILITLLQSILSVMQMPEAG------------RQIVYGVV 315

Query: 328 LFLVILM 334
           + +++L+
Sbjct: 316 IIVMLLL 322


>gi|225570195|ref|ZP_03779220.1| hypothetical protein CLOHYLEM_06291 [Clostridium hylemonae DSM
           15053]
 gi|225160990|gb|EEG73609.1| hypothetical protein CLOHYLEM_06291 [Clostridium hylemonae DSM
           15053]
          Length = 341

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/318 (14%), Positives = 101/318 (31%), Gaps = 28/318 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +      + +V+  ++     G+  S   I ++ IQ ++  + A  L+ V+  LG + ++
Sbjct: 34  RPSTPSIVFSVILIVVFSAAAGSFLSFDNIQAILIQTVVIGIMAIALNFVI-LLGEIDIS 92

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+ AY +  + S      W       +++      +           L +++ I+
Sbjct: 93  VGSQLAVCAYVFGYVVS------WSDSLALGLVAAMSAGGILGLINGLLVAKLNLSSFIV 146

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +   QN+L     +  G   +              +         +F+   I +Y  LL 
Sbjct: 147 TLATQNVLRGILLVYAGGGALN------------LTAEHRTLGIGTFLGINISVYVFLLV 194

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
                    +  R T        +  NQ+A       +I   L A+ +     G+ G  F
Sbjct: 195 F----IICAMLSRHTVWGRDVFAVGGNQRAAVMAGLPVINTYLKAYVLLGVCCGLTGGIF 250

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFY 304
                ++   +    E  ++ ++ I      GG  S       + ++  ++     M   
Sbjct: 251 LCQIGQLQAAIANGYEMRVIAAVAIGGTSMAGGRGSALSPLVGSILIGIILNGMSVMAVP 310

Query: 305 YFNSLLKFDCSFNMRHTT 322
                L       +    
Sbjct: 311 STFESLVLGAIILLAVAV 328


>gi|206577047|ref|YP_002236057.1| D-xylose ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288933055|ref|YP_003437114.1| inner-membrane translocator [Klebsiella variicola At-22]
 gi|290511849|ref|ZP_06551217.1| D-xylose transport system permease [Klebsiella sp. 1_1_55]
 gi|206566105|gb|ACI07881.1| D-xylose ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288887784|gb|ADC56102.1| inner-membrane translocator [Klebsiella variicola At-22]
 gi|289775639|gb|EFD83639.1| D-xylose transport system permease [Klebsiella sp. 1_1_55]
          Length = 393

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/355 (12%), Positives = 99/355 (27%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  + V+     ++  GA  S + I ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIVVIMLFFTWVTDGAYLSARNISNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             +   +  I     G  + L I V+ ++    G   G      +     +    M    
Sbjct: 91  MGLLGGAAAIFDVWLGWPLPLTILVTLVMGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 134 QNIL--------------------IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
             ++                               G+             R   +     
Sbjct: 151 GILIGITNGTTVSPTSPAMAQIGQSYLPDGIGFGIGVVGMAAFIVWQWRGRMRRQALGLA 210

Query: 174 SSFVIYEIFMYYVLLGMCFLSASII---------------------LWLRRTAISNAWRT 212
           +S     +    +   +   +  ++                         RTA       
Sbjct: 211 TSSSTAAVGRQAITAVIVLGAIWLLNDYRGVPTPVLILAALLLAGLFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGIGSVAGAVMGAFIMSALDNGMSMMDVATFWQYIVKGAILLLAVWM 385


>gi|239623135|ref|ZP_04666166.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239522502|gb|EEQ62368.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47FAA]
          Length = 323

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 94/314 (29%), Gaps = 26/314 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L+ +V  ++         S   I ++  Q  I ++ A G + V+   G + ++     
Sbjct: 28  IVLVMIVLTVIFTSMEPGFISTANIINIIRQASIMIIVACGATFVM-VAGGIDVSVGGVA 86

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +       L S        L+  + +          + S      +  IA +I +    
Sbjct: 87  CLTGIIVAKLLSIGMPVALALLLGAGVGGVLGLCSGMMVS------HFHIAPMIATLAIM 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           N+      +T G   +Y     +                         +   ++ M  ++
Sbjct: 141 NLANGAANLTTGGTAVYNLPESF--------------IMLGRGYIAGIIPLQVIIMLGIA 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A   + L +TA       I  N+         +   K+  + +S     +AG    +   
Sbjct: 187 AVSYIVLSKTAFGRRVYAIGGNEMVAELSGINVRKNKIIYYILSGICASIAGMIMTSRMG 246

Query: 255 RISPDMFKFSENIIVISIVILG-----GMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P M        + +IVI G     G  S++     T +++ +      +    F  +
Sbjct: 247 SGQPSMGATWNMDSITAIVIGGTSLNGGSGSITGSVLGTIMMVMITNGLNIVGVNSFWQM 306

Query: 310 LKFDCSFNMRHTTL 323
           +       +     
Sbjct: 307 VISAMILIITIIVY 320


>gi|183393136|gb|ACC61730.1| ribose/xylose/arabinose/galactoside ABC-type transport system
           permease component [Lactobacillus rhamnosus HN001]
          Length = 278

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 73/250 (29%), Gaps = 19/250 (7%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      S   + ++  Q+ I  + A+G++ V+   G + L+     A+       + + 
Sbjct: 37  VMSPTFVSPANLLNLLRQVSINAVIAFGMTFVI-LTGGIDLSVGSILALSGAVTASMLTS 95

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
              +   L     + +    +   L +      Y   A  I +     I      +    
Sbjct: 96  GFAAPLALTVGLILGAVFGLLNGVLIA------YGKAAPFIATLATMTIFRGATYVFTNG 149

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
             I  A                F  P   +I  +    + + +            +TA  
Sbjct: 150 NPITGAKMNNSFLFQFMGRGYLFGIPFPIIIMIVVYGVLFVLL-----------HKTAFG 198

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N+ A            +  + +S     +AG    +      PD    S  +
Sbjct: 199 RKTYALGGNETAARIAGVRTKVVTMLIYTISGLMAAIAGIILTSRLSSAQPDA-GTSYEM 257

Query: 268 IVISIVILGG 277
             I+ V+LGG
Sbjct: 258 DAIAAVVLGG 267


>gi|331696300|ref|YP_004332539.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326950989|gb|AEA24686.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 287

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 81/310 (26%), Gaps = 30/310 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + ++ +   I+ +   GL ++  S G+LS         GAY    +    G    L + V
Sbjct: 8   VANVVLLAAIFGLVNVGLVVLYRSTGVLSFAQGHLLMFGAYIMSTVQPSLGYWGGLAVTV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +      +                  +                        V D ++ 
Sbjct: 68  GVIAVMGVVIYATTMRFMLGKSEFEKVVMSFLVALII--------------TQVIDLIWS 113

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +   S                     L     +   +   + RT      R +  N+ 
Sbjct: 114 TQSRSISPPTSAVIGIGAGRLPWSSVISLGIAVGVVGVLTFLIFRTVPGLRMRALAHNET 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                   +      A+ V+ A   +AG  FA      S         ++     +LGG+
Sbjct: 174 LAVYSGMRVHRLSGLAWVVAGATAAIAGVVFAQ---TSSVTFSLADIGLLAFPAAVLGGL 230

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+      + +L  +  +   +                     ++ + +  V+L+    
Sbjct: 231 KSIPGSLIGSVVLAAIFTVANYLLGGVLGGS-------------VVYLFMLAVLLVLPFG 277

Query: 339 LLRLRTPSNF 348
           L   RT    
Sbjct: 278 LFGRRTAQRL 287


>gi|310817465|ref|YP_003949823.1| ribose transport system permease [Stigmatella aurantiaca DW4/3-1]
 gi|309390537|gb|ADO67996.1| Ribose transport system permease protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 329

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 97/288 (33%), Gaps = 16/288 (5%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  ++  ++         +   + ++  +     + A G+  V+  LG + L+     A
Sbjct: 23  VLGLILLCIIGTALNSDFAAVDNVMNVLTRTAFIGIIAVGMCFVI-ILGGIDLSVGSMAA 81

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + A + +++ ++ G ++   +   A+  G   ++  L         L    LI     + 
Sbjct: 82  LIAGAMILVMNKLGPALGSPVSAIALGIGFAVVLGALFG-------LGHGLLIAKGGIEP 134

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            ++    +   +A +        L         +     + ++      +V L +  +  
Sbjct: 135 FIVTLGTLGIFRAYLTYFADGGALTLDSDLSDAYSPVYYASILGIPVPVWVFLAVALVGG 194

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            ++    RTA     + I  N++        +   K+  + +    +G+A   +      
Sbjct: 195 LVL---NRTAFGRYVQAIGSNEQVARYAAVDVGRIKVLTYMLLGICVGIATVLYVPRLGS 251

Query: 256 ISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELC 298
            SP      E   + ++++      GG  +++       +L  +  + 
Sbjct: 252 ASPTTGLLWELEAIAAVIVGGTALKGGSGTVTGTVVGAVLLSVISNIL 299


>gi|257452405|ref|ZP_05617704.1| beta-methylgalactoside transporter inner membrane component
           [Fusobacterium sp. 3_1_5R]
 gi|257466274|ref|ZP_05630585.1| beta-methylgalactoside transporter inner membrane component
           [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917431|ref|ZP_07913671.1| galactoside transport system permease mglC [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|317058948|ref|ZP_07923433.1| galactoside transport system permease mglC [Fusobacterium sp.
           3_1_5R]
 gi|313684624|gb|EFS21459.1| galactoside transport system permease mglC [Fusobacterium sp.
           3_1_5R]
 gi|313691306|gb|EFS28141.1| galactoside transport system permease mglC [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 339

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/310 (11%), Positives = 87/310 (28%), Gaps = 8/310 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+     L++     +  S +   ++  Q  +  + A G++ ++ + G   L+     
Sbjct: 21  LYLVLFCMLLVIIWKEPSFLSIRNFKNILTQSSVRAIIALGVAGLILTQG-TDLSAGRQV 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     +         +      +      +++ L  L        I   +    F 
Sbjct: 80  GLAAVISATMLQAVTNVNRVFGLDRELPIIYAIIVVCLVGLVIGVVNGLIVAKLNVHPFI 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L     +    +  Y       +         F +       + I   Y+++     +
Sbjct: 140 ATLGSMTVVYGINSLYYDIVGASPISGFSSKYSSFAQGAVDLGGFSIP--YLIIYATIAT 197

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +     +T        +  N +A       ++   +  +A+S  F    G   A    
Sbjct: 198 IIMWTLWNKTKFGKNIFAVGGNPEAAKVSGVNVVLTLVGIYALSGVFYAFGGFLEAGRIG 257

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   +   VI      GG+  +S +     IL  +      +    +   
Sbjct: 258 SATNNLGFMYEMDAIAGCVIGGVSFYGGVGRISGVITGVIILTVINYGLTYVGVSPYWQY 317

Query: 310 LKFDCSFNMR 319
           +         
Sbjct: 318 IIKGIIIVAA 327


>gi|288555727|ref|YP_003427662.1| branched chain amino acid ABC permease [Bacillus pseudofirmus OF4]
 gi|288546887|gb|ADC50770.1| branched chain amino acid ABC permease [Bacillus pseudofirmus OF4]
          Length = 287

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 96/302 (31%), Gaps = 27/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +      +Y + A GL++V G L + +      Y +GAY  + + +  G+  W+ + +
Sbjct: 8   ILNGLTIGSVYSLVALGLTLVFGILHVPNFAHGALYMVGAYIALTVMTALGVHYWIGLII 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++     ++M             +  +I S      L  +     G     +      
Sbjct: 68  AVIVIALLSVLMERLVFSRLDSKDPLPIMIASIGILFFLESFAQYMWGSQYQRMVTP--- 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +   +    V++    L  ++ L+L +T    A   +  ++ 
Sbjct: 125 ---------YGDTIQIFGLTVTMQRLLVIIAAVALMYALHLFLTKTMTGAAIIAMSQSKN 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
             F +        +  FA++      A    A     +          +    I+I+GGM
Sbjct: 176 GAFLVGINATRVSMLTFAIAGGLAAAAATLAAP--INLVFPSMGNLVIMKAFVIIIIGGM 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        IL     L        +  L+ F             + L L++ M+ + 
Sbjct: 234 GSIPGAIIGGYILGMAESLGATYISGDYKDLIAF-------------VLLVLILTMKPNG 280

Query: 339 LL 340
           L 
Sbjct: 281 LF 282


>gi|206973696|ref|ZP_03234614.1| putative ribose ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|206747852|gb|EDZ59241.1| putative ribose ABC transporter, permease protein [Bacillus cereus
           H3081.97]
          Length = 317

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/294 (10%), Positives = 81/294 (27%), Gaps = 27/294 (9%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           + +   +      +  +    +I V+ A G S V+     + ++   +  + A    ++ 
Sbjct: 23  VGMINPSFIQFNSLSLLMKSSVILVVLAIGQSFVL-FTKNIDVSVGSSMGLSAAVCGMML 81

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
           +    +   +     + +    +     +       +    ++       ++        
Sbjct: 82  TNGYSAFLSIFAAITLGAIIGFVNGIGVAKFRVPAIIMTLGMLGIVRGTMLIFTGGKWI- 140

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                                     F     I  + +   +  +  +   +  +LR+  
Sbjct: 141 --------------------EDIPNDFKQLSSIVILGLPITVWFVLIILLLLYFFLRKVP 180

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
               +  + DN+     L   +   K+ AF +S     +AG  F  +   +        E
Sbjct: 181 FGRYFYAVGDNEDGARLLGIPVNKVKIYAFMISGISAALAGCIFVMNIGFVPNQTGTGLE 240

Query: 266 NIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             ++ + V+      GG  SL   A     L  +      +    F +      
Sbjct: 241 LQVIAAAVLGGIHLKGGTGSLFGAALGALFLETISSSLVFLKIPAFWNNAISGF 294


>gi|160936558|ref|ZP_02083925.1| hypothetical protein CLOBOL_01448 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440349|gb|EDP18094.1| hypothetical protein CLOBOL_01448 [Clostridium bolteae ATCC
           BAA-613]
          Length = 324

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/327 (11%), Positives = 94/327 (28%), Gaps = 27/327 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M     + ++  +++  LAV+  ++  +      S   +  +  Q +I  + A G+++V+
Sbjct: 1   MKNVIKKFSRELEVVAALAVIM-VVFGVIQPIYFSPSNLLDILDQSVINGLLAIGMTLVI 59

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
            + G + L      AI   S              ++  +A+  G   +   L +      
Sbjct: 60  ITAG-IDLTVGSTLAIVIVSVGNFLVMGLNPFAAVLAGAAIGFGLGLVNGILVAKM---- 114

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
              +   + +    ++      +  G   +    + +        +         F++  
Sbjct: 115 --KLQPFVATLGMMSVYRGVAYLITGGWPVLNIPQNFRDIMDGDVIGTLSSSMILFLVVT 172

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +  Y +L              + T       +I  N++A       + F K+ ++A+   
Sbjct: 173 VAAYILL--------------KHTKFGTYLYSIGSNEEATRLSGVNVDFNKIMSYAICGV 218

Query: 241 FIGMAGAFFAASRDRISP-----DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVV 295
            +  AG    A      P               +    + GG  S+        +L  + 
Sbjct: 219 CVAFAGMVMLAKLGTGEPAAGASYETNAIAAAAIGGTSLAGGKGSIIGTFLGAILLQALK 278

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                     F   +            
Sbjct: 279 VGLVVCGVDTFWQYIATGLIIVFAVYV 305


>gi|83311128|ref|YP_421392.1| branched chain amino acid ABC transporter [Magnetospirillum
           magneticum AMB-1]
 gi|82945969|dbj|BAE50833.1| Branched-chain amino acid ABC-type transport system
           [Magnetospirillum magneticum AMB-1]
          Length = 289

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/228 (13%), Positives = 73/228 (32%), Gaps = 11/228 (4%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  L+Y + A GLS++ G + +++        +  Y+  +L ++ G+     +P+ A  
Sbjct: 14  LLTGLVYGLMALGLSVIFGVMRVVNFAHGDMMVVAMYAAFLLFTKLGIEPVPALPLVAGG 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G ++    +            ++      I+     +  G                
Sbjct: 74  LFVVGYLLQRFLINHFLGVTEHIQFLLLLSVAMIITNVVLMVFGPD-----------ARN 122

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           ++    F  +   +++ +            ++A +  + R T    A R   DN      
Sbjct: 123 IQLDASFESYNLGWLVLDKVRVIAAFTAGGVAALLWAFFRYTTTGTAIRACADNPVGARV 182

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           +   +       F + +A +G AG       D        ++    +I
Sbjct: 183 VGLDVEKLYAITFGIGTACVGAAGCLLLLLVDVHPHLSSDYTLLGFII 230


>gi|238793210|ref|ZP_04636837.1| Xylose transport system permease protein xylH [Yersinia intermedia
           ATCC 29909]
 gi|238727378|gb|EEQ18905.1| Xylose transport system permease protein xylH [Yersinia intermedia
           ATCC 29909]
          Length = 362

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 50/355 (14%), Positives = 98/355 (27%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  +A++     F   GA  S + I ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 1   MLAAIAIIMLFFTFTTEGAYLSARNISNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 59

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM---- 129
             +      I     G  + L I V+  +    G   G      +     +    M    
Sbjct: 60  MGLLGGVAAIFDVWLGWPLPLTIVVTLGLGLVLGAWNGWWVAYRKVPSFIVTLAGMLAFR 119

Query: 130 -------------------------------------SEIFQNILIKWKPITNGKAGIYV 152
                                                  +   +  +W+  ++       
Sbjct: 120 GILIGITNGTTVSPTSNAMSQIGQSYLPNGFGFGIGAIGLMLFVAWQWRRRSHRIRLGLP 179

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                   T               +     +   +L +  L  + I    RTA       
Sbjct: 180 VAAPQGDVTRQSITAVIVLGAIYLLNDYRGVPTPVLILTALMLAGIFMATRTAFGRRIYA 239

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N  A       +   KL+ FA++   + MAG   ++     SP     +E   + + 
Sbjct: 240 IGGNIDAARLSGVNVERTKLAVFAINGLMVAMAGLILSSRLGAGSPSAGNIAELDAIAAC 299

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 300 VIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGAILLLAVWM 354


>gi|152972439|ref|YP_001337585.1| D-xylose transport permease ABC transporter membrane protein
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238897033|ref|YP_002921779.1| D-xylose transport system permease component [Klebsiella pneumoniae
           NTUH-K2044]
 gi|262040640|ref|ZP_06013878.1| D-xylose ABC superfamily ATP binding cassette transporter, membrane
           protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|330002341|ref|ZP_08304304.1| branched-chain amino acid ABC transporter, permease protein
           [Klebsiella sp. MS 92-3]
 gi|150957288|gb|ABR79318.1| D-xylose transport permease (ABC superfamily, membrane) [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238549361|dbj|BAH65712.1| D-xylose transport system permease component [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
 gi|259042004|gb|EEW43037.1| D-xylose ABC superfamily ATP binding cassette transporter, membrane
           protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|328537326|gb|EGF63578.1| branched-chain amino acid ABC transporter, permease protein
           [Klebsiella sp. MS 92-3]
          Length = 393

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/355 (12%), Positives = 99/355 (27%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  + V+     ++  GA  S + I ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIVVIMLFFTWVTDGAYLSARNISNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             +   +  I     G  + L I V+ ++    G   G      +     +    M    
Sbjct: 91  MGLLGGAAAIFDVWLGWPLPLTILVTLVMGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 134 QNIL--------------------IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
             ++                               G+             R   +     
Sbjct: 151 GILIGITNGTTVSPTSPAMSQIGQSYLPDGIGFGIGVVGMAVFIVWQWRGRMRRQALGLA 210

Query: 174 SSFVIYEIFMYYVLLGMCFLSASII---------------------LWLRRTAISNAWRT 212
           +S     +    +   +   +  ++                         RTA       
Sbjct: 211 TSSSTAAVGRQAITAVIVLGAIWLLNDYRGVPTPVLILAALLLAGLFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGIGSVAGAVMGAFIMSALDNGMSMMDVATFWQYIVKGAILLLAVWM 385


>gi|325972052|ref|YP_004248243.1| ABC transporter inner membrane protein [Spirochaeta sp. Buddy]
 gi|324027290|gb|ADY14049.1| ABC-type transporter, integral membrane subunit [Spirochaeta sp.
           Buddy]
          Length = 333

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 55/327 (16%), Positives = 108/327 (33%), Gaps = 19/327 (5%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           S+    L + +  L LL VV  + + +      S + I+ +   + I  + A G   V+ 
Sbjct: 8   SLLKKALERRELTLMLLLVVLLVPITIRSPQFLSAENINRILNDMAILSIVAIGEFFVIL 67

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           S G + L+     A    +  ++   Y      ++ +  M  G    +     + +    
Sbjct: 68  SNG-IDLSVGSIIAFTGMACGMINESYAAVPPFVLLLVGMGIGLMMGLFNGVLVAYGKIP 126

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
             I TL    I++ +                   L   GT V +      +        +
Sbjct: 127 PIITTLGTVNIYRGLTF-----------------LLSKGTWVTAHEMSPSYIGFPRTTFL 169

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            + Y+L     +   +  + R T        I  N  A   +       ++  F +S   
Sbjct: 170 GLSYLLWIAFVVIVILYYFSRYTRTGREVYAIGGNPTAAKFVGVNENRVRVVVFLISGTL 229

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+AGA + A       +M      +  ++  +LGG+           +++G + L    
Sbjct: 230 CGLAGALWTARYASAVNEMAT-GFEMQAVAACVLGGVNFSGGAGGIIGVVLGTLFLGVVT 288

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           N      L  F  +F      L+ +AL
Sbjct: 289 NALPVIYLSVFWQTFVQGLIILIALAL 315


>gi|301047179|ref|ZP_07194272.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 185-1]
 gi|300300927|gb|EFJ57312.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 185-1]
          Length = 332

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/317 (11%), Positives = 96/317 (30%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +         + L   + + ++ ++    G +MG  +   RG +   + +    ++ 
Sbjct: 88  AFVSVCLA-----FLLQFDVPLAIACLLVLLLGALMGTLAGVLRGVFSVPSFVATLGLWS 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +TN                 +   I             + +    L M  L 
Sbjct: 143 ALRGMGLFMTNA----------------LPVPINENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   A    
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAGRLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|294010931|ref|YP_003544391.1| branched-chain amino acid transport system permease protein
           [Sphingobium japonicum UT26S]
 gi|292674261|dbj|BAI95779.1| branched-chain amino acid transport system permease protein
           [Sphingobium japonicum UT26S]
          Length = 297

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 101/310 (32%), Gaps = 26/310 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR-YGLSIWLLIP 97
           + +      +Y++ A GL++  G + ++++       +G+Y   +      G    ++  
Sbjct: 10  LFNGFSVASLYILAALGLALSFGLMRVINMAHGEILMVGSYLAYLTILFVPGPMGIIVAM 69

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
           + A +       +   +L  +     + TL+ +     IL +      G  G+ V    +
Sbjct: 70  LVAFLGAGMLGGLLEVTLVSKLTSRPLDTLLATWGVSLILQQAARDLFGATGVSVTAPAW 129

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
             G           F    +       ++LL    +   +   LR T I    R +  ++
Sbjct: 130 LDG----------GFALGPLQLPTIRLFILLLAALILGGLAALLRYTRIGLLVRAVNQDR 179

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
               ++   +       FA+ +   G+ G   A                +    +VILGG
Sbjct: 180 ATAAAMGVNVRQVDAFIFALGAGVAGVGGVVLALLGPV--TPTVGQGYIVTAFLVVILGG 237

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S+     A  ++   + L                         L +I + L +  R  
Sbjct: 238 LGSVVGTTLAALMIGLFMALSQIFVD-------------VSFAQVLTLIFVILFLQFRPQ 284

Query: 338 SLLRLRTPSN 347
            ++ +R+ + 
Sbjct: 285 GVIAVRSRAL 294


>gi|291459693|ref|ZP_06599083.1| ribose ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291417725|gb|EFE91444.1| ribose ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 325

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 83/288 (28%), Gaps = 16/288 (5%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             ++ L   V  +   L            ++          A G + V+ S G + L+  
Sbjct: 13  QAVVLLALFVICIAFSLITPKFMKATTFTNIAKSAYYVAFMAIGTTFVI-STGGIDLSIG 71

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                 A     L  R      +L+ +    +    +   + S      ++A    +M  
Sbjct: 72  TVAICSALIGGTLMERGLPMGAVLLVMLLTGALFGLLNGIMVSRMGLPAFIATLGTMMMS 131

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                ++      +   G              R             +         + + 
Sbjct: 132 RGLGSIVSKTKTISFPQGDAPGAWFREFFMITRE----------GGVLPKNFPTGFILLA 181

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            LSA + L L +T       +I  N++A       I   +  A+ +S  F  +AG  + A
Sbjct: 182 LLSAVMALVLNKTKAGRYILSIGSNKEATRLSGINIARYETLAYVLSGIFAALAGIAYVA 241

Query: 252 SRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGV 294
                 P+     E   +  IVI      GG+ S+        I+  +
Sbjct: 242 VFTTAQPNTGNGFELDAIAGIVIGGTSLSGGVGSIFGTIIGVFIMTVL 289


>gi|326319513|ref|YP_004237185.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323376349|gb|ADX48618.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 286

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 56/305 (18%), Positives = 108/305 (35%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++Y + A GLSIV G L  ++      Y +GAY      +R+GLS WL + V
Sbjct: 8   VINGIGIGMLYFLLAVGLSIVFGLLRFVNFAHGAFYLLGAYFCY-QMTRWGLSFWLALAV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ GA G +     L+          ++++      + +   +  G  G  VA     
Sbjct: 67  VPLVVGALGWLTEKLVLRHVYAKPHEFHILVTVGLALAVQELVILQWGPLGDSVAVPDLL 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                 +Y  +  +V+     L+  +   L  T + +A R   ++ +
Sbjct: 127 QGV----------VMWGSFVYPKYRLFVIGFTAVLAVGLWWVLEGTRLGSAVRAGSESTE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       FA+ +A   +AG   A  R        +      V+ +V    M
Sbjct: 177 MVSLLGINVFRIFSLVFALGAATAAIAGVLAAPIRGAEPFMGIEALGVAFVVVVVGG--M 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S         ++  V  +   +              +      ++ +A+  V+L+R H 
Sbjct: 235 GSFGGALVGGLLIGIVQSVMSTV--------------WPEGARLMIYVAMAAVLLLRPHG 280

Query: 339 LLRLR 343
           LL  +
Sbjct: 281 LLGRK 285


>gi|256394145|ref|YP_003115709.1| Monosaccharide-transporting ATPase [Catenulispora acidiphila DSM
           44928]
 gi|256360371|gb|ACU73868.1| Monosaccharide-transporting ATPase [Catenulispora acidiphila DSM
           44928]
          Length = 346

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 95/314 (30%), Gaps = 19/314 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L    V   +L         S + I  +   + I  + A   ++V+   G L ++     
Sbjct: 38  LVAALVFVLVLFGSLNANYLSWQNIQVIAEAVTISGLLAVVQTVVIII-GALDISVGSQA 96

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + + +  ++ +  G + +  I  +  I    G++ G   +  R                
Sbjct: 97  GLASVTSAMVFTSAGSNAFAGIGAALAIGAVIGVVNGAIIVYGR---------------- 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +        G A      +L   G     ++    F          +  ++  +  ++
Sbjct: 141 --VNAVIATLAGLAAYKGVAQLVSDGRAQGYVLNDSIFVFLGRGKIAGLPVMVWLLLVVA 198

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A++ + L+ T I      I  N  A       +    L+ +A+S A   +AG    A   
Sbjct: 199 AAVHVLLKYTDIGRNLYAIGGNDTAARLAGINLNKYILAVYALSGAVAAVAGILLTARTG 258

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
              P        +  I+   LGG             L+ V  L    N      +  F  
Sbjct: 259 SGQPVSGSEGLELQSITAAALGGCALKGGKGGVGGTLLAVALLGALQNGLTVQGINAFWQ 318

Query: 315 SFNMRHTTLMVIAL 328
           +       ++ + L
Sbjct: 319 NIAQGALLVVAVVL 332


>gi|238787772|ref|ZP_04631569.1| Xylose transport system permease protein xylH [Yersinia
           frederiksenii ATCC 33641]
 gi|238724115|gb|EEQ15758.1| Xylose transport system permease protein xylH [Yersinia
           frederiksenii ATCC 33641]
          Length = 362

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 50/355 (14%), Positives = 98/355 (27%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  +AV+     F   GA  S + I ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 1   MLAAIAVIMLFFTFTTEGAYLSARNISNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 59

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA-------- 125
             +      I     G  + L I V+  +    G   G      +     +         
Sbjct: 60  MGLLGGIAAIFDVWLGWPLPLTIVVTLGLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 119

Query: 126 ---------------------------------TLIMSEIFQNILIKWKPITNGKAGIYV 152
                                             +    +   +  +W+  ++       
Sbjct: 120 GILIGITNGTTVSPTSNAMSQIGQSYLPNGLGFGIGAIGLMLFVAWQWRRRSHRIRLGLP 179

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                   T               +     +   +L +  L  + I    RTA       
Sbjct: 180 VAAPQGDVTRQSITAVIVLGAIYLLNDYRGVPTPVLILTALMLAGIFMATRTAFGRRIYA 239

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N  A       +   KL+ FA++   + MAG   ++     SP     +E   + + 
Sbjct: 240 IGGNIDAARLSGVNVERTKLAVFAINGLMVAMAGLILSSRLGAGSPSAGNIAELDAIAAC 299

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 300 VIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGAILLLAVWM 354


>gi|187921211|ref|YP_001890243.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
 gi|187719649|gb|ACD20872.1| inner-membrane translocator [Burkholderia phytofirmans PsJN]
          Length = 286

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 52/304 (17%), Positives = 110/304 (36%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++Y + A GLSIV G L  ++      Y +GAY       ++ +S W  + V
Sbjct: 8   IVNGIGVGMLYFLLAVGLSIVFGLLRFVNFAHGAFYLLGAYFCY-QAMQWSMSFWTALVV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ GA   ++    L+          ++++     ++ +   +  G  G  VA     
Sbjct: 67  VPVVVGALAWVVEKLILRHVYAQQHEFHILVTVGLALVVQECAILIWGPLGDNVAVPDVL 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  +              +Y  +  +V+     L+A +   L  T + +A R   ++ +
Sbjct: 127 NGVVI----------WGSFVYPKYRLFVIGFTAVLAALLWWVLEGTRLGSAVRAGSESTE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   ++      FA+ +A   +AG   A  R              +   +V++GGM
Sbjct: 177 MVSLLGINVLRVFSLVFALGAATAALAGVLAAPIRGV--DPFMGIEALSVAFVVVVVGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +         ++  V  +   +              +      ++ +A+  V+L+R + 
Sbjct: 235 GNFLGALVGGLLVGIVQSVMSTL--------------WPEGARLMIYVAMAAVLLLRPNG 280

Query: 339 LLRL 342
           LL  
Sbjct: 281 LLGR 284


>gi|310657997|ref|YP_003935718.1| methylthioribose transport system permease [Clostridium sticklandii
           DSM 519]
 gi|308824775|emb|CBH20813.1| Methylthioribose transport system permease protein [Clostridium
           sticklandii]
          Length = 331

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/320 (11%), Positives = 100/320 (31%), Gaps = 20/320 (6%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
              L  + V++        G       + ++   + I  + A G+ I +  +G   L+  
Sbjct: 22  YGTLLTIVVIFAFFTIATDGRFMQAANLVNILRAMSITTVIATGVMISL-VVGGFDLSVG 80

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
              ++       +   Y  +I++ I  S +I+   G +  +  +K R   +      M  
Sbjct: 81  SVASMTMAVSTAMFVWYDQNIFVAIAASVVIAAVIGYLNSILIIKGRIPDMLATLAAMF- 139

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                      I NG +  +   ++      +          +        +  +++ M 
Sbjct: 140 -----------IFNGVSSTFSQGKIISQNMIMADGTTSTGLIAPMFRELGKVPTIIIIMV 188

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +   + ++L+ T        +  N++A       +    + A+ +S+   G+ G   AA
Sbjct: 189 LIMVVVHIFLKYTKHGRYMYVVGGNKEAARLSGVKVNKYIIVAYVMSAILAGIGGILLAA 248

Query: 252 SRDRISPDMFKFSENIIVISIVILG------GMTSLSKIAKATAILIGVVELCCGMNFYY 305
              + S         +  ++   +G      G  +         +++ +      ++  Y
Sbjct: 249 RIGQ-SNPSGGAGYLMESVAAAYIGFSVAGAGKPNAIGTFFGALLMVSLSNGLVMLSVPY 307

Query: 306 FNSLLKFDCSFNMRHTTLMV 325
           ++  +       +       
Sbjct: 308 YSMDIIKGAVLVLALGLTYY 327


>gi|260431807|ref|ZP_05785778.1| sugar ABC transporter, permease protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415635|gb|EEX08894.1| sugar ABC transporter, permease protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 368

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 87/305 (28%), Gaps = 22/305 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    +V    L     A  +   + +         + A G ++++   G   L+     
Sbjct: 31  IAGAILVCIFFLITADPAMFTLSGVMNFMTPAAQLGILAIGAALLM-IGGEFDLSIGSMV 89

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A     + +    + L + L IP++   + A G I G   +   G    I TL    I +
Sbjct: 90  AFSGLFFGVCVVTWQLPLVLSIPMTFAFAAAVGAINGNIVI-RSGLPSFIVTLAFLFILR 148

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY--------------- 179
            + +    +  G +      R       +  +     F   F                  
Sbjct: 149 GLSLVGLKMATGGSTQLRGVRDQVENDWLAPVFSGEAFGGLFAWLAELGVVETFKNGAPK 208

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
              +   +L    ++ +    L RT   N       ++ A  +    +   K+S F +++
Sbjct: 209 VPGIPVEILWFIAITLAATYVLLRTPAGNWIFASGGDKVAASNSGVPVNRVKISLFMLTA 268

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGV 294
               +                    E   +I+ VI      GG  S       + I   V
Sbjct: 269 CCAALVAIITVMDAGSTDARRGFQKEFEAIIAAVIGGCLLTGGYGSAIGAFFGSIIFGMV 328

Query: 295 VELCC 299
           V    
Sbjct: 329 VIGLT 333


>gi|209552398|ref|YP_002284313.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209539510|gb|ACI59442.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 352

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/322 (10%), Positives = 93/322 (28%), Gaps = 12/322 (3%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
               + +L  +  +   +   A  +   + S+   + +  +   G+++ +   G   L+ 
Sbjct: 34  RAGAVFILLALLIVGFTIAEPAFINIANLMSILQAVSVVAILGAGVTVTLAVGG-FDLSI 92

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A    +       +GL  +  + +        G++     ++ +   L +ATL M 
Sbjct: 93  GAVAASSVMAASYAMIVWGLDAYATVALVLAFGALVGLVNAFLIVRLKVPDL-LATLAMM 151

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +   + +      +  +G+ + D      +                     +   ++ M
Sbjct: 152 FLLSGLQLIPTAGRSISSGLTLPDG-----SKATGAYDPTFLLIGRYSILGTLPVSVVLM 206

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++  + +   RT I         N+ A      + +  K  A+ +S     + G   A
Sbjct: 207 ATVAVLLFVLTERTRIGRLLFATGGNEVATRLAGASTVRLKTLAYVLSGTLASLGGIVIA 266

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMT-----SLSKIAKATAILIGVVELCCGMNFYY 305
           A   R             V + +I   +      ++         +  ++     +N  Y
Sbjct: 267 ARVGRGDISSGGSLLMDSVAAALIGFAVLNLRRPNVLGTIAGAVFVGVLLNGLTMLNAPY 326

Query: 306 FNSLLKFDCSFNMRHTTLMVIA 327
           +                   + 
Sbjct: 327 YTQDFVKGAVLVGALALTYGLG 348


>gi|306832616|ref|ZP_07465755.1| ABC superfamily ATP binding cassette transporter [Streptococcus
           bovis ATCC 700338]
 gi|304425224|gb|EFM28351.1| ABC superfamily ATP binding cassette transporter [Streptococcus
           bovis ATCC 700338]
          Length = 658

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 99/305 (32%), Gaps = 33/305 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S   Q L++ + A G+ I    L +  L+   ++ +GA S  I+     ++  +    
Sbjct: 362 VLSAISQGLLWSIMAIGVFITFRILDIADLSAEGSFPLGAASTAIMIVNG-INPLIATIG 420

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +     G + G    K +   L    + ++ ++   L+         AG      L  
Sbjct: 421 GFVAGMVAGAVSGFMHTKMKIPALLTGIITLTALYSINLLVLGSANVSLAGQETLVTLMT 480

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +                   +  + +    L   +++ L  T +  A R   DN  
Sbjct: 481 SALNLSK--------------LYAVILIGVIFVALVIILLVVLLNTQVGLALRATGDNIA 526

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +   K+  + +S+  I +AG+  A +      +M   +         I+ G+
Sbjct: 527 MGEANGIKVDRMKILGYMISNGLIALAGSLLAQNNGYADMNMGTGT---------IVNGL 577

Query: 279 TSLSKIAKATAILIGVV------ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            S+     A  I+  +        +  G   Y    ++    + + +   L    L  +I
Sbjct: 578 ASI---ILAEVIVKYLPLGKRLWSIVLGSILYRLVLVIILAMNVDAQMLKLASAILLALI 634

Query: 333 LMRSH 337
           L    
Sbjct: 635 LYVPE 639


>gi|284046438|ref|YP_003396778.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
 gi|283950659|gb|ADB53403.1| inner-membrane translocator [Conexibacter woesei DSM 14684]
          Length = 358

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/314 (12%), Positives = 83/314 (26%), Gaps = 25/314 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  +A +  +   +F     +   +  M       ++    L+++      + ++    Y
Sbjct: 39  LTAVAALLFVFFSIFGTRFLTLDNVYDMARISTFLLIVGVPLTMLF-IAREIDISVGSQY 97

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +      +    +GL  WL   ++ +  G  G I  +                      
Sbjct: 98  GLATVLMAVFIVNWGLDPWLAAGLTVIAGGLMGSINAVVCTVVGVPSFICT-----LGMY 152

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           ++L     +  G   I     L     T+ +                     +L    + 
Sbjct: 153 SLLRGLSYVITGGQPITYPMELESSFFTIANGTIGD------------FPVEVLWAAAVV 200

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     L  T           N KA  +   +    +   F +     G++GA       
Sbjct: 201 AIGAFALHFTPFGAHVYATGGNDKAARASGISTRRVRFLCFVLVGLSCGLSGAITGGWLL 260

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
             S         + V + +I+GG+       S+       AI+  +      +      +
Sbjct: 261 EGS-PSTGTGFELQVFAAIIIGGVALTGGDGSIYGAVLGVAIVGMLANGLVLIGAQANWN 319

Query: 309 LLKFDCSFNMRHTT 322
                    +  T 
Sbjct: 320 DFFVGLIIVLVATI 333


>gi|190891911|ref|YP_001978453.1| branched-chain amino acid ABC transporter permease [Rhizobium etli
           CIAT 652]
 gi|190697190|gb|ACE91275.1| putative branched-chain amino acid ABC transporter, permease
           protein [Rhizobium etli CIAT 652]
          Length = 281

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 86/275 (31%), Gaps = 15/275 (5%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG 104
              IY + A GLS+  G L L++L+      +GAY    LG+ +G+  +L      +   
Sbjct: 16  LGGIYGLLAMGLSLSWGLLKLVNLSHFALAFLGAYLTYQLGTVHGVPAYLSAL--LIAPL 73

Query: 105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
              + + L S+  R      A+L+++     ++                           
Sbjct: 74  FFALGIALHSVFVRFKVKEFASLLVTFGVTILIESLIQWIWSPD-----------FLRYE 122

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
           +           +   +           L+ +    L +T +  A R    +     +  
Sbjct: 123 TPYAQTTIRLGPIFVPVLELSAFACAGVLAGAAWYALNKTMLGKALRAAAHDAPVASAFG 182

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                         SA  G+AG F A         +  +    +V ++ I+GG+ S    
Sbjct: 183 INSTRVSYILAGFCSATAGIAGVFIALIGTLAPSQIEAWIG--VVFAVAIIGGLGSPIGA 240

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
             A  ++     L   +    +  L+ F     + 
Sbjct: 241 LGAGMLIGVAENLTMSVVNPAWAPLVAFSVLIVIL 275


>gi|84685699|ref|ZP_01013596.1| hypothetical protein 1099457000253_RB2654_06999 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666365|gb|EAQ12838.1| hypothetical protein RB2654_06999 [Rhodobacterales bacterium
           HTCC2654]
          Length = 287

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 84/304 (27%), Gaps = 26/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +       +I  M + GLS+ +G + +++L       +G     +L S  G+       +
Sbjct: 8   LIDGVAYGMILFMISVGLSVTMGLMRVINLAHGGFAMLGGVVAHVLMSEAGVGYVPAALL 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
               + A    +     +    +  +  ++ +     ++I       G            
Sbjct: 68  GIAATVALAWPLERLIYRRIYGFGDLQQVLATIGLTFLMIATVNRLQGST---------- 117

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           L                F    +    V+     +   + L + RT      R   DN+ 
Sbjct: 118 LLALPLPGGLAQSVDLGFRTLPLHRIVVIGVGVAVIIGLWLLIDRTRFGIRLRAAVDNRA 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              ++         + F + +    + G   A          +     ++ + +V +GGM
Sbjct: 178 TAGAIGINTGLIYSATFCLGAGLAALGGILGAEMLPI--EAYYPLRYMVLFLVVVAVGGM 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +    A   L  +      +                   T      + + + +R   
Sbjct: 236 GSFAGSFAAALGLGLIETASRYL--------------VPEYGTIFYFACIIVFLAVRPKG 281

Query: 339 LLRL 342
           L   
Sbjct: 282 LWGR 285


>gi|251788598|ref|YP_003003319.1| inner membrane ABC transporter permease protein YjfF [Dickeya zeae
           Ech1591]
 gi|247537219|gb|ACT05840.1| inner-membrane translocator [Dickeya zeae Ech1591]
          Length = 330

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/339 (13%), Positives = 99/339 (29%), Gaps = 24/339 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++ N    I   + V+  L          S + I ++        + A G++ V+   G 
Sbjct: 2   VKRNLPLMITLAVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVI-LSGG 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A            +GLS  +  P+  ++  A G  MGL     +     I 
Sbjct: 61  IDLSVGSVIAFTGVFLAKAIGVWGLSPLVAFPLILLMGCAFGAFMGLLIDALKIPAFIIT 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L     +      +                   +  P    +  + +  
Sbjct: 121 -----------LAGMFFLRGASYLVSKESLPINHPIYETLSSLAWTIPGGGRLSAMGLLM 169

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +++    +  +     R T   N    I  N  +   +  +     L  + +S+    +A
Sbjct: 170 LMVVAVGIVLA-----RHTRFGNQVYAIGGNSTSANLMGISTRSTTLRIYMLSTGLATLA 224

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  F+         +      +  I+ V++GG         +  +   +  L        
Sbjct: 225 GIVFSIYT-SAGYALAGVGVELDAIASVVIGG------TLLSGGVGTVLGTLFGVAIQGL 277

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             + + FD + +   T + +  L  V +     L  L  
Sbjct: 278 IQTYINFDGTLSSWWTKIAIGVLLFVFIALQRGLTSLWE 316


>gi|13471645|ref|NP_103211.1| permease protein of ribose ABC transporter [Mesorhizobium loti
           MAFF303099]
 gi|14022388|dbj|BAB48997.1| permease protein of ribose ABC transporter [Mesorhizobium loti
           MAFF303099]
          Length = 316

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 48/328 (14%), Positives = 93/328 (28%), Gaps = 24/328 (7%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M  F  R +          V+   +  L+  +  S +Y+           + A G+ +V+
Sbjct: 1   MPKFIRRADPAVLTAFACIVLLLFVGSLYSRSFLSPEYLLQQLKVASFLGVIATGMMLVI 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
             LG + L+   + A GA       +   L + L IP         G++ G+     R  
Sbjct: 61  -LLGQIDLSVPWSVAAGAMMACAAAAYGPLGVALAIPFGIFCGVLIGVVNGIGVAYLRIP 119

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
            +                     TN  A   +            +        + F I  
Sbjct: 120 SMI----------------ITLATNAVAQGLMVVYTGGFSPQDSATGAMRFLATGFAIPG 163

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           +    ++  +   +   +L   RT        I + ++A +          + AFAVS  
Sbjct: 164 VPNAVIIWALIGAAMVFVL--TRTGFGRTVYGIGNRERAAYLSGIDTRRVVMIAFAVSGG 221

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVV 295
                G   A    + +  M        + ++V     ILGG  S         ++  + 
Sbjct: 222 LSAFGGVLLAGYASKAAQSMGDAYLLPSIAAVVLGGTSILGGRGSYLGTVAGVILITLLQ 281

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            +   M        + +           
Sbjct: 282 SILSVMQMPEAGRQIIYGVVIVAMLLLY 309


>gi|238757353|ref|ZP_04618539.1| Xylose transport system permease protein xylH [Yersinia aldovae
           ATCC 35236]
 gi|238704392|gb|EEP96923.1| Xylose transport system permease protein xylH [Yersinia aldovae
           ATCC 35236]
          Length = 362

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 56/355 (15%), Positives = 104/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  +A++     F   GA  S + I ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 1   MLAAIAIIMLFFTFTTEGAYLSARNISNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 59

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+  +    G   G      +               
Sbjct: 60  MGLLGGVAAIFDVWLGWPLPLTIVVTLGLGLVLGAWNGWWVAYRKVPSFIVTLAGMLAFR 119

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+ +     +     R  +   
Sbjct: 120 GILIGITNGTTVSPTSNAMSQIGQSYLPNGLGFGIGAIGLMLFVAWQWRQRNHRIRLGLP 179

Query: 171 RFPSSFVIYEIFMYYVL------------------LGMCFLSASIILWLRRTAISNAWRT 212
                  +    +  V+                  L +  L  + I    RTA       
Sbjct: 180 VAAPQGDVTRQSITAVIVLGAIYLLNDYRGVPTPVLILTALMLAGIFMATRTAFGRRIYA 239

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N  A       +   KL+ FA++   + MAG   ++     SP     +E   + + 
Sbjct: 240 IGGNIDAARLSGVNVERTKLAVFAINGLMVAMAGLILSSRLGAGSPSAGNIAELDAIAAC 299

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 300 VIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGAILLLAVWM 354


>gi|293392969|ref|ZP_06637286.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
 gi|291424503|gb|EFE97715.1| ribose ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
          Length = 329

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/321 (11%), Positives = 89/321 (27%), Gaps = 29/321 (9%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+    +  +  V+   L+ +   +  S   + ++  Q+ I  + A G++  +   G + 
Sbjct: 26  LHHPAVLPFIGFVILFALMSVLNDSFLSVNNLTNVARQVSINAIIAVGMTCAI-LTGGID 84

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+       L          ++   A+ +          +      YL +  +
Sbjct: 85  LSVGPVMALAGSVAAGLMLAAIPIPLAMVAALAVGALFGLANGACIA------YLRMPPI 138

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I++     I      +  G   I                     F        + +   +
Sbjct: 139 IVTLASMGIARGLALLYTGGYPISGLP---------------DVFAFFGRGTVLGIQVPI 183

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L M  +     L L +         +  N++A       +   K+  + +S     +AG 
Sbjct: 184 LIMLGVYLLAWLMLNQLPFGRYIYAMGGNEEAARLSGIRVPRYKMLVYVISGLTAALAGL 243

Query: 248 FFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGM 301
              +               +  I+ V+L      GG  ++        +L  +      M
Sbjct: 244 VLTSRLMS-GQPNAGEGFELDAIAAVVLGGAAISGGRGAIVGTLVGAMMLGVLNNGLNLM 302

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
           +   +   +            
Sbjct: 303 SVSPYIQNVVKGGIILAAIYL 323


>gi|150377795|ref|YP_001314390.1| monosaccharide-transporting ATPase [Sinorhizobium medicae WSM419]
 gi|150032342|gb|ABR64457.1| Monosaccharide-transporting ATPase [Sinorhizobium medicae WSM419]
          Length = 318

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 88/311 (28%), Gaps = 30/311 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  +     + L          + + ++G Q  +  + A G ++V+     + L+     
Sbjct: 19  VLAMLAAVAIYLSFASDYFLEPRNLLNVGRQASVVAIVALGQALVI-IARGIDLSVGSVI 77

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A    +L                ++ G    +              I   I +    
Sbjct: 78  GLSAVVGAVLMRDT------GSETIGLVGGLATGLACGVVNGLLYTRFRINPFIATLGTL 131

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           +I      +  G          +          R    P SF           L M  L+
Sbjct: 132 SIARGIALLMTGG-----IPVPFGGFAEFVGAGRIHNIPVSF-----------LLMIVLA 175

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + ++  RT        I DN KA       I + +L  FA+     G+ G   A +  
Sbjct: 176 IIVHIFAVRTVTGREIYAIGDNPKASRLAGVNIHYIRLFVFALCGLLAGLGGLILAGNLA 235

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              P+       + VI+ VIL      GG  S+  +     ++  +      +    +  
Sbjct: 236 SADPN-LGMGYELDVIAAVILGGTALSGGRGSIIGVIIGALLMALLNNAFVLLGISAYWQ 294

Query: 309 LLKFDCSFNMR 319
           ++         
Sbjct: 295 VVTKGLVIIFA 305


>gi|332344421|gb|AEE57755.1| ABC transporter permease YphD [Escherichia coli UMNK88]
          Length = 332

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/317 (11%), Positives = 98/317 (30%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +         + L   + + ++ ++    G +MG  +   RG +   + + +  ++ 
Sbjct: 88  AFVSVCLA-----FLLQFEVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVAILGLWS 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +TN                 +   I             + +    L M  L 
Sbjct: 143 ALRGMGLFMTNA----------------LPVPIDENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|302556053|ref|ZP_07308395.1| inner-membrane translocator [Streptomyces viridochromogenes DSM
           40736]
 gi|302473671|gb|EFL36764.1| inner-membrane translocator [Streptomyces viridochromogenes DSM
           40736]
          Length = 290

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 85/296 (28%), Gaps = 24/296 (8%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
            +Y   A  L ++    G+++        I  Y         G+S WL +PV+  +S   
Sbjct: 13  AVYASLALALVLIHRFTGIVNFAQGELAMISTYV-AWQLVSSGMSFWLALPVTLAVSFVG 71

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           GM++    ++   +   + T+I++      +     +              F        
Sbjct: 72  GMLVERIVIRPVRNSPELTTVIVTVGLFIFVNAMAGLIW-----------SFTVKDFPQP 120

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                   + V  +     +++ +  +   + L  + T+     R    N  +       
Sbjct: 121 FPDGGIDLAGVRVDWSTLGIIVVVAVVMGLLYLLFQHTSAGLVMRAAACNPASARLSGIR 180

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +    +  + +++    ++G   A         M      I   +   LGG  S      
Sbjct: 181 VGRVLMLGWGLAATVGAVSGVLVAPVLFLEPNMMGGVL--IYAFAAATLGGFDSPVGAVV 238

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              ++     L                         + ++ +  V+L+R   L   
Sbjct: 239 GGVVVGVAETLAGAY----------VGVIGADLKVGVPLVIILAVLLVRPQGLFGR 284


>gi|225570196|ref|ZP_03779221.1| hypothetical protein CLOHYLEM_06292 [Clostridium hylemonae DSM
           15053]
 gi|225160991|gb|EEG73610.1| hypothetical protein CLOHYLEM_06292 [Clostridium hylemonae DSM
           15053]
          Length = 317

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 86/302 (28%), Gaps = 26/302 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R +     + LL +V   ++F   G   +   I       +   + A G++ V+ + G 
Sbjct: 8   IRKDSARICMLLLIIVVECIVFSSTGYFFTASNIFDALRASVEIGLAALGMTFVIMTTG- 66

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+ + +           +  L+    +          L             
Sbjct: 67  IDLSVGSLLALVSVTIGFTYQAGCPFVLSLLLGLLVGIAGGAFNGALIVYGR-------- 118

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                       +    +T G    Y             S+       +        +  
Sbjct: 119 ------------LHPFVVTLGTFSFYRGIAYAATNAGAVSVFPDGYALAGRAYILGVVPV 166

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            ++    L+  I +  ++T        +  N++A       I   K+  + +    +  A
Sbjct: 167 QVVVFVVLTILIWILSKKTPFGTYVTAMGYNEEAARFSGVQIRKIKMLVYILIGFLVAAA 226

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCG 300
              + +       +     E  ++ ++V     I GG  +++       IL  +      
Sbjct: 227 AIIYTSRVSTARGNAAIGMELNVIAAVVLGGTDIKGGKGTIAGTFLGVVILAFLKNGLAM 286

Query: 301 MN 302
           ++
Sbjct: 287 LS 288


>gi|269928992|ref|YP_003321313.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
 gi|269788349|gb|ACZ40491.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745]
          Length = 419

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/374 (11%), Positives = 95/374 (25%), Gaps = 58/374 (15%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
            R N     + L   V  ++  +      +   + ++ IQI      A G+++V+  LG 
Sbjct: 33  TRSNIGALPVLLGLAVIAVIFQIANRNFLTALNLTNLMIQIAAVGTIAVGVTLVL-LLGE 91

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+      + A    +L  + G      +  + ++  A G + G  S K       + 
Sbjct: 92  IDLSVGAVSGLAAGVMAVLSVKQGWPALAAVAAAILVGTAIGFLQGAWSFKLGVPSFIVT 151

Query: 126 TLIMSEIF------------------------QNILIKWKPITNGKAGIYVADRLYFLGT 161
              +                              +L  W     G A + +         
Sbjct: 152 LAGLLGWQGALLRVLGSTGTINLNDPFITGIANRLLPLWLGWAAGIAFVLIYAGTALWSR 211

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYV---------------------------LLGMCFLS 194
             R            V   I +  +                           +L      
Sbjct: 212 RERLRAGLPVPAVGGVALRIAVVSLGVLAAVALMSVDRSPNPRVQIAGVPSGVLIFLIFV 271

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               L  RRT        +  N +A       +   +++ F + S      G   A+   
Sbjct: 272 VVFDLITRRTRFGRHIYAVGGNAEAARRAGINVDRVRITVFMLGSTLAACGGILAASRLY 331

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            ++         +  I+  ++      GG  ++        ++  +      +       
Sbjct: 332 AVNQASGSGDVLLNSIAAAVIGGTSLFGGRGTVWSALLGALVIGAISNGMDLLALSAAIK 391

Query: 309 LLKFDCSFNMRHTT 322
            +       +  T 
Sbjct: 392 FMITGGVLLLAVTI 405


>gi|261368567|ref|ZP_05981450.1| inner membrane ABC transporter permease protein YjfF
           [Subdoligranulum variabile DSM 15176]
 gi|282569283|gb|EFB74818.1| inner membrane ABC transporter permease protein YjfF
           [Subdoligranulum variabile DSM 15176]
          Length = 344

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/327 (9%), Positives = 92/327 (28%), Gaps = 4/327 (1%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           SI S  L  +  I   + +     +        + +   ++ I     +  A G++ V+ 
Sbjct: 9   SINSNTLLLFITIGLFIVLYAAGCIVYASKGFTNLQTFLNLFINNAGLICVACGMTCVM- 67

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G + ++     A+           + ++ WL+  +  ++    GM+ G      R   
Sbjct: 68  LTGGIDISVGSLVALDCMLLAYGMGEWKINAWLMCLIVLVVGVVFGMVQGFCVGYLRIQP 127

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
             +    M        +      +    +      +                   V+  I
Sbjct: 128 FIVTMAGMFFARGMTAVISTNQLSITQDVSEIFYNWANYRIYLPFGGVMNKAGKMVMPYI 187

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +  V+  +  +   ++L   R     +   +  ++++   +   +   ++ A  + S  
Sbjct: 188 RIGVVVAMLVLVVVFLLLRYTR--FGRSLYAVGGSEQSAAMMGLDVKRTRMKAHVLCSFL 245

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI-AKATAILIGVVELCCG 300
             + G  +  +    S       E   + S VI G + +        +   + +      
Sbjct: 246 CSIGGICYCLNTTSASVSQATGMEMDAIASSVIGGTLLTGGVGNVIGSFFGVLITGTIST 305

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +          +            ++ 
Sbjct: 306 IVKANGKLASSWPNILTAALLCFFIVL 332


>gi|254449453|ref|ZP_05062890.1| ribose ABC transporter permease [Octadecabacter antarcticus 238]
 gi|198263859|gb|EDY88129.1| ribose ABC transporter permease [Octadecabacter antarcticus 238]
          Length = 331

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 48/319 (15%), Positives = 100/319 (31%), Gaps = 27/319 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  +V  + L +      S   +  +  Q     + A G ++V+   G + L+     
Sbjct: 34  ILVALIVLTVALSIAADNFLSTYNMSVVARQAAFVGLLALGQTLVLLVGG-IDLSVGATA 92

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A    I  +++G+  WL+IP +     + G I G+     R +   +          
Sbjct: 93  GLSAIVGSIALTQWGIHPWLIIPFTMAFGFSLGAINGIFVAGLRLNPFIVTLATWEIFAG 152

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+  K       G                      F        + + + ++    + 
Sbjct: 153 MTLVITKGYPIRPLGPA--------------------FTIFGQGEIMGVPFPVVLFLVVG 192

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +I  L +T        +  N+ A           +  AF ++ AF  +AG  +A+  D
Sbjct: 193 LVLIWMLSQTRFGRNIFAVGGNRDAAILAGIRARRVEFIAFGMAGAFSALAGILYASRMD 252

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                       +  I+  ILGG        +     I    L   +     N  +  + 
Sbjct: 253 G-GQPSVGEGWLMGAITAAILGGT-----SLRGGQGSIVGTMLGALLLAVLANGTVLMNV 306

Query: 315 SFNMRHTTLMVIALFLVIL 333
           S   +   +  + L  V++
Sbjct: 307 SGFWQRVIVGGVILVAVLV 325


>gi|158187221|gb|ABW22841.1| putative inner-membrane translocator [Burkholderia sp. NCIMB 10467]
          Length = 282

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 89/300 (29%), Gaps = 28/300 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +   +  + + GL ++ G   +++      + IG Y                + V
Sbjct: 5   ILNGLVYGSLLYVLSVGLVLIFGLRRVVNFAHGGMFMIGGYIGY--TVSAVAGFGTGVFV 62

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S +     G+++     +   D+  I T++++     +L        G   + +      
Sbjct: 63  SVLAMAVFGVLLDRFVFRQLQDHDPIVTVLVTFGILLVLEDVAKTVWGNDILSLPMPQAL 122

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G                  + ++  +V++    ++  + LWLR +      R    +  
Sbjct: 123 SGV----------LMLGETGFPVYRLFVVVVAIVVALGLSLWLRFSRAGLFVRAASVDPI 172

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                             V     G+AG   A             S  I    +V+ GG+
Sbjct: 173 TTGMQGVNTERLSAIVVGVGIGLAGLAGTVSAPLLALA--PSIGASIVIDAFIVVVTGGL 230

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS +    A  ++  V                          + + ++ +  V++ R H 
Sbjct: 231 TSFTGAFIAAMLIGQVHNWGVAF--------------VPAAASLIPLLLMVCVLIWRPHG 276


>gi|323142689|ref|ZP_08077407.1| branched-chain amino acid ABC transporter, permease protein
           [Succinatimonas hippei YIT 12066]
 gi|322417530|gb|EFY08146.1| branched-chain amino acid ABC transporter, permease protein
           [Succinatimonas hippei YIT 12066]
          Length = 350

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/269 (10%), Positives = 78/269 (28%), Gaps = 21/269 (7%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
             +  +    ++ + G++ V+   G + ++     AI A     +       +     + 
Sbjct: 49  IDILYRASSLIILSLGMTFVIA-TGGIDISVGAVVAISAAVCCYMLGGDISGVPQHPFII 107

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           A+++  C  I+             I  ++ + I          +      I V  + +  
Sbjct: 108 AILAALCAGIISGIWNGTLVAKFKIQAMVATLILMTAGRGIAQLITDGQIITVYYKPFSY 167

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                             I  + +   +L    +   +I+  R+T++    +++  NQ A
Sbjct: 168 --------------IGGNIPGVMLPTAMLIALAMVILVIVLDRKTSLGLMIQSVGINQTA 213

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV------ 273
                  +     + +  S    G AG    +       +    +  +  I  V      
Sbjct: 214 SRYAGIKVTAVLFAVYIFSGFCAGTAGLIEGSLIRAADANNAGLNMEMDAILAVTLGGTL 273

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMN 302
           ++GG   +         +  +      + 
Sbjct: 274 MVGGRYYIGGTIIGAITIQTLTTTMYAVG 302


>gi|300940198|ref|ZP_07154799.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 21-1]
 gi|300454986|gb|EFK18479.1| putative ribose ABC transporter permease protein [Escherichia coli
           MS 21-1]
          Length = 331

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/317 (11%), Positives = 89/317 (28%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +     L          +  +  ++ GA    +             +ATL +    +
Sbjct: 88  AFVSVCLAFLLQ--FEVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALR 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                        +   I             + +    L M  L 
Sbjct: 146 GMGLFMTN-------------------ALPVPINENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|281412027|ref|YP_003346106.1| inner-membrane translocator [Thermotoga naphthophila RKU-10]
 gi|281373130|gb|ADA66692.1| inner-membrane translocator [Thermotoga naphthophila RKU-10]
          Length = 313

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 93/297 (31%), Gaps = 26/297 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L+ +   + L +      + + I ++ + +    + ++G+++V+ + G + L+     
Sbjct: 13  IFLILIAIVVFLGVTTREFLTVENIFTVILNVSFIAIMSFGMTMVIITSG-IDLSVGSIL 71

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              +    +L    GLS +L + +   +    G+  GL   K R         ++S    
Sbjct: 72  GAASVVMGLLMDEKGLSPFLSVVIGLAVGVGFGLANGLLITKARLAPFISTLGMLSV--- 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                         G+       +  +                +    +Y  ++G     
Sbjct: 129 ------------GRGLAYVLSGGWPISPFPESFTVHGQGMVGPVPVPVIYMAVIG----- 171

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               ++L+ T        I  N +A   +        +  + ++      AG    A   
Sbjct: 172 VIAHIFLKYTVTGRRIYAIGGNMEASKLVGIKTDRILIMVYTINGFLAAFAGFLLTAWLG 231

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
              P+  +  E  ++ + VI      GG  ++        I+  +      +    F
Sbjct: 232 VAQPNAGQGYELDVIAATVIGGTSLSGGEGTILGAFLGAVIMGVLRNGMILLGVSSF 288


>gi|226305522|ref|YP_002765482.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|229489402|ref|ZP_04383265.1| ABC sugar transporter, permease component [Rhodococcus erythropolis
           SK121]
 gi|226184639|dbj|BAH32743.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
 gi|229323499|gb|EEN89257.1| ABC sugar transporter, permease component [Rhodococcus erythropolis
           SK121]
          Length = 352

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 98/283 (34%), Gaps = 13/283 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            + A+   +   +     ++ + + ++        + A  +++++   G   L+  +A  
Sbjct: 38  LVGAIAIFIFFCIVAAPFRTPEALATVLYSSSTIGIMACAVALLM-IGGEFDLSAGVAVT 96

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             + +  ++     L++W+   ++ ++S A G   G   +K +     I       +   
Sbjct: 97  TSSLAASMIAYNLHLNLWVGAILALVVSLAVGFFNGYLVMKTKIPSFLITLSSFLMLTGI 156

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L   K ++   A   V+D   F             F SSF ++ + +   ++     +A
Sbjct: 157 NLAVTKLVSGQVATPSVSDMAGFDSAK-------KVFASSFSVFGVSVKITVVWWLLFTA 209

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L +T I N    +  NQ +  ++   +   K+  F          G     S + 
Sbjct: 210 IATFVLFKTKIGNWIFAVGGNQDSARAIGVPVTAVKIGLFMTVGFAAWFVGMHLLFSFNT 269

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIG 293
           +       +E + +I+ VI      GG  +    A    I   
Sbjct: 270 VQSGQGVGNEFLYIIAAVIGGCLLTGGYGTAIGAAIGAFIFGM 312


>gi|226325937|ref|ZP_03801455.1| hypothetical protein COPCOM_03750 [Coprococcus comes ATCC 27758]
 gi|225205479|gb|EEG87833.1| hypothetical protein COPCOM_03750 [Coprococcus comes ATCC 27758]
          Length = 356

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/294 (10%), Positives = 78/294 (26%), Gaps = 11/294 (3%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL-----SLNCVIAY 74
            +Y L++   +          S+   + I  + A  + I  G  G +      L+     
Sbjct: 34  AIYLLIIIAVIYTYTQNSRFLSVASIVNIISLSAANIPIACGIAGTIVLTGTDLSAGRVV 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     L      +  +   +  +      +I+ +                    F 
Sbjct: 94  GLTACISASLLQSVTYATKIFPDLPVLPIPLVILIVIVVGGIVGWVNGFFVAKFHLHPFI 153

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV-IYEIFMYYVLLGMCFL 193
             L     +        + +       +            SF+ I  + +   +   C +
Sbjct: 154 VTLATQLIVYGILLMYIMLNGNNGQPLSGLDKSFKNFVTGSFLKIRGVPIPNYVWYACVV 213

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              +     +T        +  N +A       ++   +    ++    G+ G   +A  
Sbjct: 214 VVFMWFMWNKTTFGKNMFAVGSNPEAANVSGVNVMRTTILVHTLAGCMYGITGFIESARI 273

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
                +     E   + + VI     +GG   +S +     IL  +      + 
Sbjct: 274 GSNQANTGLNYECDAIAACVIGGVSFVGGTGKISGVVLGVFILRIIFVALQFLA 327


>gi|146309820|ref|YP_001174894.1| inner-membrane translocator [Enterobacter sp. 638]
 gi|145316696|gb|ABP58843.1| xylose ABC transporter membrane protein [Enterobacter sp. 638]
          Length = 393

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 105/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     ++  G+  S + I ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWMTDGSYLSARNISNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM---- 129
             +      I     G  +   I V+ ++    G   G      +     +    M    
Sbjct: 91  MGLLGGVAAIFDVWLGWPLPFTIVVTLVLGLLLGTWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 130 -------------------SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                              S+I Q+ L      T G  G+       +     R  +   
Sbjct: 151 GILIGITNGTTVSPTSASMSQIGQSYLSDGLGFTFGAIGLMAFIAWQWRARMRREALGLA 210

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSA------------------SIILWLRRTAISNAWRT 212
              S+ V+    +  V++                         + +    RTA       
Sbjct: 211 APASTSVVGRQALTAVIVLGAIWLLNDYRGVPTPVLILTLLLLAGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNIEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|121611024|ref|YP_998831.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121555664|gb|ABM59813.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 283

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 92/306 (30%), Gaps = 28/306 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  +   + ++ + GL+++ G   +++      Y +GAY           + WL +  
Sbjct: 6   LFNGLVYGALLIVMSSGLALIYGLRRVVNFAHGALYMLGAYIGY--SVALRSNFWLALLA 63

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G+++    L+   D   +  ++++     IL        GK           
Sbjct: 64  APAAMAVVGLLLDRYGLRLLQDREPLTVMLVTFGLLLILEDLVAFIWGKGNHS------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +  F           +   V+     ++  + LWLR + I    R    +  
Sbjct: 117 ---LFTPDLLDFPVHLLGHEVPAYRMGVIAVGALVAVGLTLWLRLSKIGLYVRAASTDPV 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
                             + SA  G+AG   A                I    +V++GG+
Sbjct: 174 TSAMQGVDTDLISAVVVGLGSALAGLAGVVAAPFLSLSPHMSSDVL--IDSFVVVVIGGL 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL+    A  +L  V  +                         L  I +  +++ +   
Sbjct: 232 GSLAGAFAAALLLGMVQAIGAVYMPGV--------------SVLLPFIFMIAILICKPSG 277

Query: 339 LLRLRT 344
           L   RT
Sbjct: 278 LAGSRT 283


>gi|86358789|ref|YP_470681.1| sugar ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86282891|gb|ABC91954.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           CFN 42]
          Length = 332

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/316 (10%), Positives = 92/316 (29%), Gaps = 23/316 (7%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
              + +  ++  L L     +  + K + ++   +    + A G+++V+   G + L+  
Sbjct: 25  TFWVLIAVILACLFLSFATDSFATAKNLYNITRNVTFVAIIALGMTLVI-ITGGIDLSVG 83

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               + +    +                 + +     ++          YL     +++ 
Sbjct: 84  SVLCLCSMVLAVTMHAGYG------IEIGIAAAIGTALVVGAFNGVMIAYLDFPPFVVTL 137

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
              ++      +            ++  G     L+          I    +Y ++L + 
Sbjct: 138 GMLSVARSLAMVA------SNNTVVFQFGPDHDKLLALGGGAWFLGIANPVLYMIILALL 191

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                     R T        I  N+ A       +   K++ + +S+   G+AG     
Sbjct: 192 TGFVL-----RWTRFGRYVFAIGGNEHAATLTGVPVRRIKIAVYMISALSAGIAGIVQTG 246

Query: 252 SRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
               ++ ++    E  ++ + VI      GG+ +        A++  +      +    F
Sbjct: 247 WLGAVTTNIGAGMELQVIAAAVIGGANLAGGVGTAFGALVGAALIEVIRNSLGLLGINAF 306

Query: 307 NSLLKFDCSFNMRHTT 322
                   +  +    
Sbjct: 307 WQGTFIGGAIVLAVLF 322


>gi|115360937|ref|YP_778074.1| inner membrane ABC transporter permease protein YjfF [Burkholderia
           ambifaria AMMD]
 gi|115286265|gb|ABI91740.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia ambifaria AMMD]
          Length = 362

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 90/309 (29%), Gaps = 27/309 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILI----YVMFAWGL 56
           M+ F  RL     +  ++ +V    LF F     +  +   +   +L+     ++ A G+
Sbjct: 1   MNRFLTRLADPRTLPIVVTIVLFAALFGFGSVMYTGFFSMQVLTGLLVDNAFLLIVAIGM 60

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
           + V+   G + L+     A+      +   R    +W ++P+  +     G  MG     
Sbjct: 61  TFVI-VSGGIDLSVGSVVALTTIFCAVGAERLHWPVWAIVPLVLLFGALYGAAMGALIHY 119

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
           FR     +    M        +                 +     T+           S 
Sbjct: 120 FRLQPFIVTLAGMFLARGACFL-----------------ITTQSITINEPTFHALAGISV 162

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
            I    +    L       + I     T        I  N+++   +   +   K+  +A
Sbjct: 163 PIGGGTLSAGALIALATLTAAIYVAHFTRFGRNVYAIGGNERSALLMGLPVARTKVGVYA 222

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAIL 291
           +S     + G  F            +  E   + + VI      GG+  +        IL
Sbjct: 223 LSGFCSALGGVVFTLYVLSGYGLQAQGMELDAIAATVIGGTLLTGGVGYVIGSVFGVGIL 282

Query: 292 IGVVELCCG 300
             +  L   
Sbjct: 283 GTIQVLITF 291


>gi|320536863|ref|ZP_08036857.1| ribose ABC transporter permease protein [Treponema phagedenis
           F0421]
 gi|320146279|gb|EFW37901.1| ribose ABC transporter permease protein [Treponema phagedenis
           F0421]
          Length = 314

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 96/310 (30%), Gaps = 25/310 (8%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           S F+ R+   D    L  +   LL+ +F    ++     S+  Q  I  + A+G++ V+ 
Sbjct: 5   SKFTNRIKLQDIGSFLALLFLILLISIFSPDFRTFNNFLSLLRQSAINGLIAFGMTFVI- 63

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G + L+     ++ A     L         +++  + ++    G+I G+   K +   
Sbjct: 64  LTGGIDLSVGSVLSLTAALSAGLIKAGAPVPLVMLL-ALLMGLCFGLINGIMVAKTKIQP 122

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                + M+      +I        + G               S + F       +   I
Sbjct: 123 FIATLITMTAFRGFTMIYTNGKPISQLG--------------DSALLFNLGKGFILGIPI 168

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            ++ ++L        +     +T +         N KA           K   + +S   
Sbjct: 169 PVWILVLLFGVFWTLL----NKTTLGRKIYASGSNAKAAELSGIRTNRIKFFVYGISGVT 224

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVE 296
             ++G    +      P +    E   + ++      + GG  S+        I+  +  
Sbjct: 225 AALSGLVLLSRLGSAQPTLGVGYELDAIAAVALGGTSMSGGKGSIRGTLIGILIIAVLNN 284

Query: 297 LCCGMNFYYF 306
               +    +
Sbjct: 285 GLNIIGISSY 294


>gi|288904343|ref|YP_003429564.1| ABC transporter substrate-binding protein [Streptococcus
           gallolyticus UCN34]
 gi|288731068|emb|CBI12614.1| putative ABC transporter substrate binding/membrane-spanning
           protein [Streptococcus gallolyticus UCN34]
          Length = 658

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 99/305 (32%), Gaps = 33/305 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S   Q L++ + A G+ I    L +  L+   ++ +GA S  I+     ++  +    
Sbjct: 362 VLSAISQGLLWSIMAIGVFITFRILDIADLSAEGSFPLGAASTAIMIVNG-INPLIATIG 420

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +     G + G    K +   L    + ++ ++   L+         AG      L  
Sbjct: 421 GFLAGMIAGAVSGFMHTKMKIPALLTGIITLTALYSINLLVLGSANVSLAGQETLVTLMT 480

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +                   +  + +    L   +++ L  T +  A R   DN  
Sbjct: 481 SALNLSK--------------LYAVILIGVIFVALVIILLVVLLNTQVGLALRATGDNIA 526

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +   K+  + +S+  I +AG+  A +      +M   +         I+ G+
Sbjct: 527 MGEANGIKVDRMKILGYMISNGLIALAGSLLAQNNGYADMNMGTGT---------IVNGL 577

Query: 279 TSLSKIAKATAILIGVV------ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            S+     A  I+  +        +  G   Y    ++    + + +   L    L  +I
Sbjct: 578 ASI---ILAEVIVKYLPLGKRLWSIVLGSILYRLVLVIILAMNVDAQMLKLASAILLALI 634

Query: 333 LMRSH 337
           L    
Sbjct: 635 LYVPE 639


>gi|118592042|ref|ZP_01549436.1| ABC transporter, permease protein [Stappia aggregata IAM 12614]
 gi|118435338|gb|EAV41985.1| ABC transporter, permease protein [Stappia aggregata IAM 12614]
          Length = 342

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 100/317 (31%), Gaps = 8/317 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +L     L   L+     S +    +   + I  + A G++  +  +G   L+     
Sbjct: 19  FLVLLGGLALFFSLYASGFASPRSAVFILQSVAITGILALGVTCTL-VVGGFDLSIGSVA 77

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
                           S ++ + +  ++    G+I G   +K R   L +ATL M  +  
Sbjct: 78  TSALMLSAYSMVVLEQSAFVAVALCLVMGAVVGLINGFLIVKMRVPDL-LATLGMMFLLI 136

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +        +   G+ + + +   GT   + +   R     +  +  +   ++    ++
Sbjct: 137 GLQRIPTQGNSIATGMSLGEGVVAEGTFSEAFLWLGRHRFD-LFLDRLLPVPVVVFLLIA 195

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I L+L  T        I  N++A   + T +   K+ A+ +S     + G   AA   
Sbjct: 196 LLIWLFLGYTRHGRLMYAIGSNERAAELVGTNVQRYKIVAYMISGMLASVGGILLAARLG 255

Query: 255 RISPDMFKFSENIIVISI----VILGGMT-SLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           R             V +      +LG    +    A     +  +++    MN  Y+   
Sbjct: 256 RGDIASGNNLLLDSVAAALIGFAVLGAARPNAFGTAAGALFVGILLQGLTMMNAPYYMQD 315

Query: 310 LKFDCSFNMRHTTLMVI 326
                           +
Sbjct: 316 FVKGAVLVAALVFTFYL 332


>gi|114707584|ref|ZP_01440480.1| Sugar transport system permease protein [Fulvimarina pelagi
           HTCC2506]
 gi|114537143|gb|EAU40271.1| Sugar transport system permease protein [Fulvimarina pelagi
           HTCC2506]
          Length = 316

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 95/299 (31%), Gaps = 28/299 (9%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            +L ++ +    ++        S+  + S+ +      + A G+S+V+   G + ++   
Sbjct: 16  ILLVVVILALFAVVGWINPRFVSENNLTSIFVGNAYIAVAAIGMSLVI-ISGNIDVSIGA 74

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
              + A    +L +      +  +    + +    ++  L +       +A   ++    
Sbjct: 75  LIGVLAVISGLLVTNGYPVWFAWLAPLLIGAAINTLVGCLIAYARVPSIIATLAMLSILS 134

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
              I        +G  G Y   +   LG                          +  M  
Sbjct: 135 GGLITFTGGQWISGLPGAYQLAQFRLLGVPSP----------------------IWFMVG 172

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           ++    L +R TA   +   +  N +A  +         +  FA+  A  G+A   FA  
Sbjct: 173 MTIIAALLMRYTAFGRSVYAVGSNPEAARASGIGHASTVVKVFAIHGAIAGVAAVLFATQ 232

Query: 253 RDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
              I        E +I+ + V+     LGG+ ++     A  +   +      +N   +
Sbjct: 233 LQVIQSTTPVGLELVIITASVVGGVSILGGVGTVVGSTLAAILFAAIGSSLIFLNVSAY 291


>gi|239931494|ref|ZP_04688447.1| sugar transport permease [Streptomyces ghanaensis ATCC 14672]
 gi|291439870|ref|ZP_06579260.1| sugar transport permease [Streptomyces ghanaensis ATCC 14672]
 gi|291342765|gb|EFE69721.1| sugar transport permease [Streptomyces ghanaensis ATCC 14672]
          Length = 414

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/350 (12%), Positives = 88/350 (25%), Gaps = 55/350 (15%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +   +L  L ++  L      G     + + ++ +Q    ++ A G+ +V+   G +
Sbjct: 36  RNMRQYGMLIALGLIVALFAVWTDGDLLLPRNVSNLVLQNSYILILAIGMMLVI-ISGHI 94

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI-- 124
            L+     A       +   R  L   L + +   +    G I G            +  
Sbjct: 95  DLSVGSLTAFVGSMAAVFMVRNDLPWPLAVVLCLAVGAIAGAIQGFFIAYGGIPSFIVTL 154

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
           A ++       I ++ + +     G+      +       +          F +  + + 
Sbjct: 155 AGMLTFRGLTEIFLEGQTLGPFPKGLQKIANGFMPEVGPETNYHNLTLLLGFALIALVVL 214

Query: 185 -----------------------------------------------YVLLGMCFLSASI 197
                                                           VLL +  L    
Sbjct: 215 QEVRDRRRQQEFALDVLPAKLFLLKLVALAAAILMVTLLLASYKGAPIVLLILGALLVGF 274

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +R   I      I  N  A               F        +AG  FAA  +  S
Sbjct: 275 GYVMRNAVIGRHIYAIGGNLPAAKLSGVRDKKVTFLVFLNMGMLAALAGLVFAARFNAAS 334

Query: 258 PDMF-----KFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           P        +      +    + GG+ ++        +L  +      + 
Sbjct: 335 PKAGLNFELEAIAAAFIGGASMSGGVGTVLGAIIGGLVLGVLNNGMNLVG 384


>gi|289811933|ref|ZP_06542562.1| putative ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 193

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 49/154 (31%), Gaps = 17/154 (11%)

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +      L+  +   L +TA    +    DN +    L       ++ AF+++     +A
Sbjct: 8   IGWFTLVLALLMAWLLAKTAFGRNFYATGDNLQGARQLGVRTEMVRIMAFSLNGGMAALA 67

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCG 300
           G  FA+    I        E   + + V     +LGG  ++         L  +  +   
Sbjct: 68  GIVFASQIGFIPNQTGTGLEMKAIAACVLEGISLLGGSGTVIGAILGAYFLTQIDSVLVL 127

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
           +    +             +  +  + L  V++ 
Sbjct: 128 LRIPAW------------WNDFIAGLVLLGVLVF 149


>gi|167622204|ref|YP_001672498.1| monosaccharide-transporting ATPase [Shewanella halifaxensis
           HAW-EB4]
 gi|167352226|gb|ABZ74839.1| Monosaccharide-transporting ATPase [Shewanella halifaxensis
           HAW-EB4]
          Length = 332

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 85/290 (29%), Gaps = 20/290 (6%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             +   I  M +   I  + A GL  VV   G + ++     AIG Y         G + 
Sbjct: 38  FMTLGNIFDMTVSSAILGIMACGL-FVVLIAGGIDISFPAIAAIGQYLMATFVLANGGNF 96

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            +   ++A+   A GM+  +   K +          +      + + +  +     G ++
Sbjct: 97  AIAFAIAALTGIALGMVNAVLVYKLKAP-------AIIITIAMLNVYFGLLIYFSNGEWL 149

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                +    V  L         + +    M  + +            + +T I      
Sbjct: 150 YGFPDWFMDGVEVLRFTASDGYDYGLNLPMMTLLAVIALTSIL-----MNKTRIGRQIYA 204

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +  N  A   +        L  +    A  G+A          ++P+       + V++ 
Sbjct: 205 MGGNSDAASRIGINGFGLNLFVYGYMGAMAGIAAVVQTQITQSVAPNSL-MGFELTVLAA 263

Query: 273 VILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           V+LGG        +L  +     +L  +      +    +   +      
Sbjct: 264 VVLGGTSMSGGKGTLLGVILGVVLLAVLKNGLTLLGVPSYWHTVVTGLII 313


>gi|163739382|ref|ZP_02146793.1| inner-membrane translocator [Phaeobacter gallaeciensis BS107]
 gi|161387452|gb|EDQ11810.1| inner-membrane translocator [Phaeobacter gallaeciensis BS107]
          Length = 328

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/324 (11%), Positives = 98/324 (30%), Gaps = 33/324 (10%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV----------------- 82
            +  +  ++Y + A G  ++  + G+ +    +     A + V                 
Sbjct: 13  LNGLMAGVLYALVALGFVLIYKASGIFNYAQGVMALFAAMTLVGIMNGQVPFSHVINAIF 72

Query: 83  ---ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              I    + +  ++ I ++  +      ++    ++       I   + +      L  
Sbjct: 73  GGHITHFGWTVPSFVAIVMTVGVMVLLAWMVQHFVMRHLVGQEPIILFMATIGLAYFLEG 132

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +  G     +   L            +  F   F I  + +   ++    +   +  
Sbjct: 133 VADLMWGSEIKALDVGLPQGINLWIDETTYQIFDYGFFIDNLDIVATVIAALLVMGLVA- 191

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           + + T    A R + D+ +A  S+  ++ F  +  ++V+     +AG  +          
Sbjct: 192 FAQYTKQGRAMRAVADDHQAALSVGISLNFIWVLVWSVAGFVALVAGIMWGTKSGVQFSL 251

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                  +  + +++LGG TS+        I+    +L   M         +   +    
Sbjct: 252 S---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFMIGPMVGGATENWFA---- 304

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
                 +   L ++ R   L   +
Sbjct: 305 -----YVLALLFLVFRPQGLFGEK 323


>gi|91781259|ref|YP_556466.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693919|gb|ABE37116.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia xenovorans LB400]
          Length = 285

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 81/271 (29%), Gaps = 16/271 (5%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           +   +G+ +        +G Y   ++      S WL I ++ ++ G  G  +    ++  
Sbjct: 28  IASLMGIFNFAHGEFVLLGGYILFLVQRAGYPS-WLGILLAPVVVGLLGWGVERLVVRRF 86

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
            D    A L    +   I    +    G                         +    + 
Sbjct: 87  YDEPVGAMLATFALGLIIRESVRYALGGNYFQVAEP-------------ISGSYVLGSLH 133

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
           +  +  +++     + A+  L LR T +    R   +N     +   +      +AF   
Sbjct: 134 FSTWRIFLIGAAIAIVAASWLLLRCTRLGLLVRATLENPSLTRASGFSTASFYTAAFVFG 193

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           SA  G+AGA    S    +    +F         V+ GG+ +          + G+    
Sbjct: 194 SALAGLAGALIVPSFSLFADLGTRFLIQG--FISVLTGGIGTFEGPLAGAFAVGGLSAGL 251

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             +     + +L F  +          + + 
Sbjct: 252 PWLISPVLSDVLVFVLAILFVKFRSDGLLVI 282


>gi|291519924|emb|CBK75145.1| nucleoside ABC transporter membrane protein [Butyrivibrio
           fibrisolvens 16/4]
          Length = 381

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 77/270 (28%), Gaps = 10/270 (3%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            GL ++     Y +G  + +      G +  L I  + +     G I G     F  + +
Sbjct: 90  AGLFNIGVAGQYTVGIIASLYTSLALGWNWALCILAAIVAGAVWGFIAGCFKAFFNVNEV 149

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
               ++         I    I  G   +  +    +  + V        F   F     +
Sbjct: 150 IAGIMLNWIGLYICNI----ILGGAKCMNQSKSETYEISDVNPSGLLPGFMQDFFGGNQY 205

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           M   +     ++  I++ L +T      +    N++A            +    +S A  
Sbjct: 206 MTIAIPITVIVAIIILVVLNKTTFGYELKATGHNKEAAKYSGMNAKRNIILTLVISGAIA 265

Query: 243 GMAGAFFAAS-RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
           GMA   +  +  +               I++  LGG+  +        I    VE     
Sbjct: 266 GMAAGLYYLTGVEHFKIASSVPGMGFSGIAVAFLGGLHPI-----GAIIAGLFVEYITLG 320

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             Y   +      +  M    + +    L 
Sbjct: 321 GQYLNTNYYNPQVADLMISIIIYLCGFVLF 350


>gi|224367609|ref|YP_002601772.1| LivH2 [Desulfobacterium autotrophicum HRM2]
 gi|223690325|gb|ACN13608.1| LivH2 [Desulfobacterium autotrophicum HRM2]
          Length = 300

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 92/305 (30%), Gaps = 17/305 (5%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      I+ + A G ++V G + L++       A+ ++  + +  ++       I  
Sbjct: 8   LVNGLTIGSIFALVALGYTMVYGIMKLINFAHGDLVAMASFVGLTVYDQFLGKTTNSILA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +I    G I+ +  +                      +    +      +    R+ F
Sbjct: 68  VIIIFAVTGTIIAMAGIVLERVAYRPLRKAPRLSAVVSALGASLVIQNGIMLIWGPRMRF 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I    +    V        +L+    +   +I ++ +T +  A R    +  
Sbjct: 128 FPADILPAIT---WNIGGVYISFIQVVILVISLLIMVGLIFFIDKTRVGAAIRATSIDHD 184

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +       F + +    + G F       I+ +M  ++  +      I+GG+
Sbjct: 185 ASRLMGIDVNGIITLIFVIGTFLGAVGGLFIGLYYRGINFNM-GWNYGLYAFVAAIIGGI 243

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            ++        +L        G     +     F               L  +++++   
Sbjct: 244 GNIPGAMVGGMLLGIFKAFIAGYVSSTWADAFTFT-------------LLIAILVVKPTG 290

Query: 339 LLRLR 343
           ++  R
Sbjct: 291 IMGER 295


>gi|49477917|ref|YP_037039.1| sugar ABC transporter permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49329473|gb|AAT60119.1| sugar ABC transporter, permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 317

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 90/305 (29%), Gaps = 27/305 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L ++Y  ++ +   +      +  M    +I V+ A G S V+     + ++   + 
Sbjct: 12  IITLLLIYIAIVGMINPSFIQFNSLSLMVKSSVILVVLAIGQSFVL-FTKNIDVSVGSSM 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A    +L +             ++ +      +             +  +IM+    
Sbjct: 71  GLSAAVCGMLLTNEYS------ASLSIFAAITLGAIIGFVNGIGVAKFRVPAIIMTLGML 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+     I  G   I                     F     I  + +   +  +  + 
Sbjct: 125 GIIRGAMLIFTGGKWIEDIP---------------NDFKQLSSIVILGLPITVWFVLIIL 169

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +  +LR+      +  + DN+     +   +   K+ AF +S     +AG  F  +  
Sbjct: 170 LLLYFFLRKVPFGRYFYAVGDNEDGARLIGIPVNKVKICAFIISGISAALAGCIFVMNIG 229

Query: 255 RISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            I        E  ++ + V+      GG  SL   A     L  +      +    F + 
Sbjct: 230 FIPNQTGTGLELQVIAAAVLGGIHLKGGTGSLFGAALGALFLETISSSLVFLKIPAFWNN 289

Query: 310 LKFDC 314
                
Sbjct: 290 AISGF 294


>gi|13472896|ref|NP_104463.1| permease protein, sugar ABC transporter (ribose) [Mesorhizobium
           loti MAFF303099]
 gi|14023643|dbj|BAB50249.1| permease protein, sugar ABC transporter (ribose) [Mesorhizobium
           loti MAFF303099]
          Length = 322

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/309 (10%), Positives = 80/309 (25%), Gaps = 39/309 (12%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            +  S   I ++  Q  +  + A G + V+   G + L+             +L +    
Sbjct: 39  SSFASANNISNLLRQGSMIAILAVGQTFVI-ITGGIDLSVGAVVGFATVIAAMLINAGIP 97

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
               ++    +                   ++     + S     +L+            
Sbjct: 98  VFLAILITLLVGVAIGLFHGFGIVKMGLPPFIITLATLTSLRGIGLLMTNGN-------- 149

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                      ++ +        +SF+      + V+L        +      +      
Sbjct: 150 ---------SISINNDAFQEFSRNSFLGVPNLFWMVILVGIPAYIFLH----HSRWGRYL 196

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
            ++  N +A       +      A+ +S       G   A+     +P   +  E   + 
Sbjct: 197 FSVGSNAEASRLSGVNVQRTIYMAYTLSGLCAAFVGVLLASRIGIGNPTQAEGWELQAIA 256

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           S VI      G + S+        IL  +      +N   F                +  
Sbjct: 257 SSVIGGTSLFGAVGSVHGPLLGAFILATINNGANLLNVNAF------------WQRIITG 304

Query: 326 IALFLVILM 334
           + + +++  
Sbjct: 305 VLIIVIVYF 313


>gi|331697000|ref|YP_004333239.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326951689|gb|AEA25386.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 366

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/320 (10%), Positives = 92/320 (28%), Gaps = 28/320 (8%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
              L +    L ++ +   L       +  +   ID++ +Q  +  +   G + ++   G
Sbjct: 31  PNDLLRSALPLVVVIIALSLFTNSHNASFLTGDNIDNILVQSAVLGILVVGQTFLI-IGG 89

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
            + L+     +  +     + +     + + + +  + +G   +   L +          
Sbjct: 90  EVDLSVGSMVSFTSVLGAWMYTHGWSPVVVAVTLLVVGTGVGLLWGLLVAH--------- 140

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
                      + +    +T G  G + +  L        S+              +   
Sbjct: 141 -----------VGVPSFILTVGGLGFFSSLALILSQNRPISVASVLGNLGFATWLGLPAL 189

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            V+     +  +++L   R         +  +++  F         K++ F V+   +G+
Sbjct: 190 AVIFLAVCVVGAVVLHSTR--FGRQVFAVGSSEQTAFLAGLPTKRIKVTLFVVNGLLVGL 247

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
           AG    A      P      E   + ++V+      GG  S+      T +   +     
Sbjct: 248 AGIVQLARLSAGDPTSGAGLELSCIAAVVLGGAALTGGRGSMIGGLLGTLLFGVISASLV 307

Query: 300 GMNFYYFNSLLKFDCSFNMR 319
            +N                 
Sbjct: 308 FLNIGGSWKDFVTGAVLIFA 327


>gi|301155587|emb|CBW15055.1| D-ribose transporter subunit [Haemophilus parainfluenzae T3T1]
          Length = 317

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/301 (10%), Positives = 89/301 (29%), Gaps = 26/301 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           + +    S + + S+  Q+ ++ + A G++ ++ + G + L+     A+ A     + + 
Sbjct: 28  VSIDGFFSARTVWSIIEQVSMFGIIAIGVTFIIITTG-IDLSSGSVVALTAVVSASIVTG 86

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                       ++ S        +      G +    T +         +    I  G 
Sbjct: 87  GD----------SVSSALLAFAASILIGALLGLFNGGFTALGGIPPFISTLGMMIIARGA 136

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
           A +Y   R     +   + I          +  +++  V+           + L R+   
Sbjct: 137 AQLYSDGRPIDASSEAFTWIADVNIFGLPGLVLLYILIVIAS--------HILLSRSTFG 188

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N  A            +  + +  A  G+AGA  A+         +  +  +
Sbjct: 189 RHVYAVGGNLNAAKICGINTNRTLIWVYVLGGALSGLAGALLASRT-YAGNPSYGLAWEL 247

Query: 268 IVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             I+  ++GG+       ++        I+    +    +    +   +       +   
Sbjct: 248 DAIAAAVIGGVSLSGGFGTIPMCVIGALIIGTTNKGLNMLGVDPYWQQIVKGAIIVIAVL 307

Query: 322 T 322
            
Sbjct: 308 L 308


>gi|65320247|ref|ZP_00393206.1| COG1172: Ribose/xylose/arabinose/galactoside ABC-type transport
           systems, permease components [Bacillus anthracis str.
           A2012]
          Length = 317

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 89/297 (29%), Gaps = 27/297 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L ++Y  ++ +   +      +  M    +I V+ A G S V+     + ++   + 
Sbjct: 12  IITLLLIYIAIVGMINPSFIQFNSLSLMVKSSVILVVLAIGQSFVL-FTKNIDVSVGSSM 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A    +L +             ++ +      +             +  +IM+    
Sbjct: 71  GLSAAVCGMLLTNEYS------ASLSIFAAITLGAIIGFVNGMGVAKFRVPAIIMTLGML 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+     I  G   I                     F     I  + +   +  +  + 
Sbjct: 125 GIIRGAMLIFTGGKWIEDIP---------------NDFKQLSSIVILGLPITVWFVLIIL 169

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +  +LR+      +  + DN+     +   +   K+ AF +S     +AG  F  +  
Sbjct: 170 LLLYFFLRKVPFGRYFYAVGDNEDGARLIGIPVNKVKICAFIISGISAALAGCIFVMNIG 229

Query: 255 RISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
            I        E  ++ + V+      GG  SL   A     L  +      +    F
Sbjct: 230 FIPNQTGTGLELQVIAAAVLGGIHXKGGTGSLFGAALGALFLETISSSLVFLKIPAF 286


>gi|212639147|ref|YP_002315667.1| ribose ABC transporter permease [Anoxybacillus flavithermus WK1]
 gi|212560627|gb|ACJ33682.1| ABC-type ribose transport system, permease component [Anoxybacillus
           flavithermus WK1]
          Length = 389

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/362 (8%), Positives = 91/362 (25%), Gaps = 47/362 (12%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           +++     +    +   +   +      S + + ++  Q+ +  + A G+ +V+   G +
Sbjct: 19  KIDIRAYTMIGALIAIWIFFGMLNETFLSARNLSNLFTQMSVTAILAIGMVLVI-VAGHI 77

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL---- 122
            L+      +      IL +  G+   ++I  + +     G + G               
Sbjct: 78  DLSVGSIVGLTGGVAAILSNWMGMPTSVVIVCTLLAGALVGFVQGWLVAYRAIPAFIVTL 137

Query: 123 -------------------------------------AIATLIMSEIFQNILIKWKPITN 145
                                                    L    I    +  ++   +
Sbjct: 138 GGMMIFRGVLMGITKSTTIPIFDAQFIALGSAYFTDIFGMILAAIAIVALFISTFRKRKS 197

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
            +   +    L      +  +          +     + + ++ +  L+        +T 
Sbjct: 198 RQQYGFTVSPLPLELAKLFVISVLIFVFVVTMNSYKGIPFPIIFVIALALIFSFIATKTT 257

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
                  I  N +A       I    +  F  +     +A     A     +    +  E
Sbjct: 258 FGRHVYAIGGNVEAARLSGINIQRHTMMLFVFTGLLSAIAALVLTARLSSATISAGQMYE 317

Query: 266 NIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
              + + VI     +GG  ++        ++  +      +    F   +       +  
Sbjct: 318 LDAIAACVIGGTSLMGGSGTIIGAIIGAMVMTSLDNGMSLLGMETFWQYIVKGSILILAV 377

Query: 321 TT 322
             
Sbjct: 378 WI 379


>gi|117617979|ref|YP_858522.1| beta-methylgalactoside transporter inner membrane component
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117559386|gb|ABK36334.1| galactoside ABC transporter, permease protein MglC [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 336

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/313 (8%), Positives = 92/313 (29%), Gaps = 8/313 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ +V  +++ +   +  S     ++  Q  + V+ A G++ ++ + G   L+     
Sbjct: 18  IYVVLLVLLMIIVIKEPSFLSLTNFSNILTQSSVRVIIALGVAGIIITQG-TDLSAGRQV 76

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     +         +   +  +   A  +++ +           I   +    F 
Sbjct: 77  GLAALIAATMLQALTNVNKVFPSLGEVPIPAVILLVCVVGALIGLVNGLIVAYLNVTPFI 136

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L     +    +  + +     +         F +       +++        +  + 
Sbjct: 137 TTLGTMIIVYGINSLYFDSVGASPVAGFDPRFSSFAQGFIKLGGFKLSYLTFYAAIASVF 196

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             ++    +T        I  N +A       +    +  +A++  F    G   A    
Sbjct: 197 VWVLWN--KTRFGKNIFAIGGNPEAAKVSGVNVAVNLVMIYALAGVFYAFGGMLEAGRIG 254

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + + V+      GG+ +++ +     I   +      +    +   
Sbjct: 255 SATNNLGFMYELDAIAACVVGGVSFAGGVGTVAGVITGVLIFTLINYGLTYIGVSPYWQF 314

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 315 IIKGGIIILAVAL 327


>gi|29833960|ref|NP_828594.1| ABC transporter permease [Streptomyces avermitilis MA-4680]
 gi|29611085|dbj|BAC75129.1| putative simple sugar ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
          Length = 332

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 103/323 (31%), Gaps = 29/323 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
            R  ++D ++  L VV  LL F F+    +   +  +    L   + A  ++++V   G 
Sbjct: 7   TRAIRWDTVVGALLVVVLLLSFGFVDGFGNGLNLSFLIGNTLPIALIALPMTLLV-VAGE 65

Query: 66  LSLNCVIAYAI-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           + L+      + G+    +      +   + + +   +       + +  L      + I
Sbjct: 66  IDLSVASTAGLSGSVLGALWNQGMAIETIIPLCLLLGVVCGLVNGLLVTRLGLPSLAVTI 125

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL        I++    +                          +   ++  I + F+ 
Sbjct: 126 GTLAAYRGIAQIVLGSDAV--------------------TDFPTQYLDFAAGRIGDTFLP 165

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y  L    L A  ++ L  T    +   I  +++A       +   KL  F ++     +
Sbjct: 166 YAFLPFLVLLAIAVVALHATPFGRSLFAIGASEEAARFAGLRVKRQKLILFTLTGLMASL 225

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELC 298
            G  +A        D       + V++ V+LGG+       +L        +L  +  + 
Sbjct: 226 TGVLWALHYASARYDNAT-GLELSVVAAVLLGGIDFDGGKGTLGGAIAGVFLLGALQNVM 284

Query: 299 CGMNFYYFNSLLKFDCSFNMRHT 321
             +N    + ++       +   
Sbjct: 285 SLVNVSAQSQIVVTGVLLVVSVL 307


>gi|46202445|ref|ZP_00053198.2| COG0559: Branched-chain amino acid ABC-type transport system,
           permease components [Magnetospirillum magnetotacticum
           MS-1]
          Length = 289

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 73/228 (32%), Gaps = 11/228 (4%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  L+Y + A GLS++ G + +++        +  Y+  +L ++ G+     +P+ A +
Sbjct: 14  LLTGLVYGLMALGLSVIFGVMRVVNFAHGDMMVVAMYAAFLLYTKMGIEPVPALPLVAGL 73

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
               G ++    +            ++      I+     +  G                
Sbjct: 74  LFVVGYLLQRFLINHFLGVTEHIQFLLLLSVAMIITNIVLMVFGPD-----------ARN 122

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           ++    F  +    ++ +            ++A +  + + T    A R   DN      
Sbjct: 123 IQLDASFESYSLGPLVLDKVRVTAAFTAGGVAALLWAFFKYTTTGTAIRACADNPVGARV 182

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
           +   +       F + +A +G AG       D        ++    +I
Sbjct: 183 VGLNVEKLYAITFGIGTACVGAAGCLLLLLVDVHPHLSSDYTLLGFII 230


>gi|327400894|ref|YP_004341733.1| ABC transporter integral membrane subunit [Archaeoglobus veneficus
           SNP6]
 gi|327316402|gb|AEA47018.1| ABC-type transporter, integral membrane subunit [Archaeoglobus
           veneficus SNP6]
          Length = 292

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 100/306 (32%), Gaps = 23/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      IY + A G  ++  +  +L+         GA+   +     GL +W  + +
Sbjct: 6   LINGITMGGIYALIALGFVLIYKASKVLNFAQGELVMAGAFIC-LALFDSGLPLWASVII 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++S   G I+    LK       ++ ++++     ++        G            
Sbjct: 65  AVILSAFVGFIIEKAVLKPLIGEPILSVIMVTLGLAYMIRGLVLAIWGPD---------- 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  +     F    VI        L+      A  IL+  RT I  A R + D+Q 
Sbjct: 115 -IRAFPQIFPPGSFEVFGVIIPYVYLGGLVLSLVAIAVFILFFTRTTIGIAMRAVADDQS 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL  ++      ++A+S+    + G         I+ +         V ++VILGG+
Sbjct: 174 AAMSLGISVEKIFAISWAISAMVAAIGGILVGNIYGGINVNFAFIGL--KVFAVVILGGL 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+     L                           ++ + +++ ++ + 
Sbjct: 232 DSIPGAIVGGIIIGVAEALGGTYLEPVVGGGF---------KDVFPLLLMLVIMAVKPYG 282

Query: 339 LLRLRT 344
           L     
Sbjct: 283 LFGTER 288


>gi|162147287|ref|YP_001601748.1| ribose ABC transporter permease [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209544333|ref|YP_002276562.1| Monosaccharide-transporting ATPase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161785864|emb|CAP55435.1| Ribose transport system permease protein rbsC [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209532010|gb|ACI51947.1| Monosaccharide-transporting ATPase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 325

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 60/331 (18%), Positives = 105/331 (31%), Gaps = 36/331 (10%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV-GSLGLLSLN 69
              IL L A++             S   + SM +  +   + A+G  +V+ G  G + L+
Sbjct: 8   RIVILGLFALLVLGGFAFGNPTILSADNVSSMAVFAVELGIIAFGQGLVIQGGDGAIDLS 67

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +      +  SR     W +     + SGA        ++        IATL  
Sbjct: 68  VGAMSGLAQVLTALFISRGL--PWPVGVGIGIASGAAMGGCNAAAIARFRIPPIIATLGT 125

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
              F  + +              A  L     TV  +                   +L  
Sbjct: 126 MFAFSGLALIASDGNTIDLTAAPAPFLAMGQGTVLGVPFQ----------------ILCL 169

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              L A +++   R+    A   +  N  A +     +   + + + +S A  G+AG   
Sbjct: 170 YLPLLAVLVVVQHRSRFGRALYLVGTNATAAWLAGIPVKRLRAATYVLSGALSGLAGVIA 229

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           AA     +PD    +  I +  +V     I GG  S    A AT  +  V          
Sbjct: 230 AARLGTATPDGVPEANLISIAIVVLGGASIFGGDGSPIGTAIATIAIAVV---------- 279

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
             N  L ++         +M + L L++L+ 
Sbjct: 280 --NYGLNYNDFNPTLQAGMMGLILVLIVLVE 308


>gi|311277505|ref|YP_003939736.1| inner-membrane translocator [Enterobacter cloacae SCF1]
 gi|308746700|gb|ADO46452.1| inner-membrane translocator [Enterobacter cloacae SCF1]
          Length = 393

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/355 (12%), Positives = 97/355 (27%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     +   GA  S + + ++  Q  I  + A G+  V+     + L+    
Sbjct: 32  MIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVI-VSAEIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA-------- 125
             +      I    +G  + L + V+  +    G   G      +     +         
Sbjct: 91  MGLLGGVAAIFDVWFGWPLPLTVIVTLALGLVLGAWNGWWVAYRKVPSFIVTLAGMLAFR 150

Query: 126 ---------------------------------TLIMSEIFQNILIKWKPITNGKAGIYV 152
                                             L +  +   +  +W+     +A    
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLPDGVGFILGVLGLMLFVAWQWRGRMRRQALGLE 210

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                 +                 +     +   +L +  L    +    RTA       
Sbjct: 211 TPAPTGVVGRQSLTAVIVLGAIWMLNDYRGVPTPVLLLALLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMGMMDVPTFWQYIVKGAILLLAVWM 385


>gi|296135400|ref|YP_003642642.1| inner-membrane translocator [Thiomonas intermedia K12]
 gi|295795522|gb|ADG30312.1| inner-membrane translocator [Thiomonas intermedia K12]
          Length = 296

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 55/325 (16%), Positives = 118/325 (36%), Gaps = 39/325 (12%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            +   + +FLFL      +   S+   ++ +++ A GL+++ G  G L    V  +  GA
Sbjct: 1   MLALLIAVFLFLPHVYGNE---SLLFTLMTFIVLAQGLNLLYGFTGYLPFGYVGFFGCGA 57

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
           Y+  +L    GL + L +    + +     ++  P L+  G Y +IA+L  S+I   ++ 
Sbjct: 58  YATSLLVLHSGLPVLLCVAGGGL-AAVVMGLILGPLLRLSGAYFSIASLAASQILYFVVS 116

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
                                          +      V      Y+ +L +  L+ ++ 
Sbjct: 117 N--------------------TNLADITGGPYGLKIEQVYAPTASYHTMLAVLVLATALA 156

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
            + R +A     R +R +  +       I+ A+L  + +S+   G+AG  +A +     P
Sbjct: 157 AYFRVSAFGMGLRAMRQDPVSASMAGIDIVRARLITWLISAGVAGLAGGAYAWNLSVFYP 216

Query: 259 DM-FKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFN 317
           +  F    ++  I   + GG+ ++        +L              ++       S  
Sbjct: 217 EAVFTLQISVFAIVFSLFGGVGTVIGPIIGAGVL--------------YSLYSAIGISEP 262

Query: 318 MRHTTLMVIALFLVILMRSHSLLRL 342
                +    + L++L     +L L
Sbjct: 263 QYFQLIYGGLIVLLVLFMPGGVLSL 287


>gi|163745500|ref|ZP_02152860.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Oceanibulbus indolifex HEL-45]
 gi|161382318|gb|EDQ06727.1| branched-chain amino acid ABC transporter, permease protein,
           putative [Oceanibulbus indolifex HEL-45]
          Length = 330

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/325 (10%), Positives = 100/325 (30%), Gaps = 32/325 (9%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---------------- 82
             +  +  ++Y + A G  ++  + G+ +    +     A + V                
Sbjct: 13  FMNGLMAGVLYALVALGFVLIYKASGIFNYAQGVMALFAALTLVGIMDGQVPFSHLINAI 72

Query: 83  ----ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               +    + +  +L I ++ ++       +     ++      I   + +      L 
Sbjct: 73  LGTEVHHFGWHVPAFLAILLTMVVMIVLAYCVQRFVFRYLVGQEPIILFMATIGLAYFLE 132

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASII 198
               +  G     +   L            F      F I  + +   ++    +   ++
Sbjct: 133 GVGDLMWGSEIKTLDVGLPQGINVWIDEFTFEATGYGFFIDNLDIVASIVAAILV-IGLV 191

Query: 199 LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISP 258
           ++ + T    A R + D+ +A  S+  ++ F  +  ++++     +AG  + A       
Sbjct: 192 MFAQYTKQGRAMRAVADDHQAALSVGVSLNFIWILVWSLAGFVALVAGIMWGAKSGVQFS 251

Query: 259 DMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM 318
                   +  + +++LGG TS+        I+    +L   +    F      +     
Sbjct: 252 LS---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFLIGAPFLGGATENW---- 304

Query: 319 RHTTLMVIALFLVILMRSHSLLRLR 343
                  +   + ++ R   L   +
Sbjct: 305 ----FAYMLALVFLVFRPQGLFGEK 325


>gi|121608760|ref|YP_996567.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121553400|gb|ABM57549.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 422

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/332 (12%), Positives = 103/332 (31%), Gaps = 33/332 (9%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
           L+      +  L            +M  QI   ++     ++++G  G+LS    +   +
Sbjct: 12  LIVWTLFAITLLVAPMLLRSGLALTMLSQIGYMIIICLSYNMLLGQGGMLSFGHAVYTGL 71

Query: 77  GAYSYVILGS-----RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
           G++  +   +      + + + L+  V  +   +  +++G  + K  G   A+ T+ + E
Sbjct: 72  GSFIAIHAMNLAGKGSWQIPLVLIPLVGGLAGASFAVLLGFVTTKKAGTTFAMITMGVGE 131

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +  ++ +       G+ GI                +    F        I +YY++   C
Sbjct: 132 LVASMALMLPEFFGGEGGIT------------TDRVYGQPFLGWSFGPAIEVYYLIAAYC 179

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           F+  + +     T +      +RDN +    +       +  AF ++  F G+ G     
Sbjct: 180 FVCTAAMFAFTGTPLGRILNAVRDNPERVEFIGYDTQRVRYFAFIIAGFFAGIGGGLTTI 239

Query: 252 SRDRIS-PDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           + + I+  D      +   +    LGG T                               
Sbjct: 240 NFEIITGADSLSIVRSGGYLLFTFLGGATFFFGPIIG---------------AVLLVLAS 284

Query: 311 KFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                        + +    +++     +  L
Sbjct: 285 VLLAELTKAWPLYLGLVFLFMVMYAPGGVASL 316


>gi|291617344|ref|YP_003520086.1| YtfT [Pantoea ananatis LMG 20103]
 gi|291152374|gb|ADD76958.1| YtfT [Pantoea ananatis LMG 20103]
          Length = 345

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 91/298 (30%), Gaps = 27/298 (9%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
             +  +     + A G+++V+   G + L+     AI   +   L        ++ I V+
Sbjct: 64  IDIINRAAPVALLAIGMTLVIA-TGGIDLSVGAVMAIAGATAATLTVAGHGVPFI-IMVT 121

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                ACG+  G+     R        ++M                  AG  +A  +   
Sbjct: 122 LASGLACGIWNGILVALLRIQPFVATLILM-----------------VAGRGIAQLITQG 164

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                +      F +  +       ++ + +      + L  R+TA+      +  N +A
Sbjct: 165 QIVTFNNDSLGWFGNGALWLLPVPVWITVAVA---LLVWLLARKTALGLFIEAVGINLRA 221

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +         +S +A+S     +AG   AA       +       +  I  V++GG  
Sbjct: 222 ARNAGVNGWLVVMSTYAISGLCAAVAGLIVAADIRGADANNAGLWLELDAILAVVIGGA- 280

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
                       I +  +   +       +L       +      ++ + +++L    
Sbjct: 281 ----SLMGGRFNIVLSLIGALIIQSMNTGILLSGFPPELNQVVKAIVVMCVLLLQSPR 334


>gi|257462218|ref|ZP_05626635.1| beta-methylgalactoside transporter inner membrane component
           [Fusobacterium sp. D12]
 gi|317059888|ref|ZP_07924373.1| galactoside transport system permease mglC [Fusobacterium sp. D12]
 gi|313685564|gb|EFS22399.1| galactoside transport system permease mglC [Fusobacterium sp. D12]
          Length = 339

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/310 (11%), Positives = 87/310 (28%), Gaps = 8/310 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+     L++     +  S +   ++  Q  +  + A G++ ++ + G   L+     
Sbjct: 21  LYLVLFCMLLVIIWKEPSFLSIQNFKNILTQSSVRAIIALGVAGLILTQG-TDLSAGRQV 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     +         +      +      +++ L  L        I   +    F 
Sbjct: 80  GLAAVISATMLQAVTNVNRVFGLNRELPIIYAIIVVCLVGLVIGIINGLIVAKLSVHPFI 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L     +    +  Y       +         F +       + I   Y+++     +
Sbjct: 140 ATLGSMTVVYGINSLYYDIVGASPISGFSSKYSAFAQGAIELGGFSIP--YLIIYASIAT 197

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +     +T        +  N +A       ++   +  +A+S  F    G   A    
Sbjct: 198 IIMWTLWNKTKFGKNIFAVGGNPEAAKVSGVNVVLTLVGIYALSGVFYAFGGFLEAGRIG 257

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   +   VI      GG+  +S +     IL  +      +    +   
Sbjct: 258 SATNNLGFMYEMDAIAGCVIGGVSFYGGVGRISGVITGVIILTVINYGLTYVGVSPYWQY 317

Query: 310 LKFDCSFNMR 319
           +         
Sbjct: 318 IIKGIIIVAA 327


>gi|25169056|emb|CAD47892.1| putative ribose ABC transporter [Arthrobacter nicotinovorans]
          Length = 347

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 98/322 (30%), Gaps = 29/322 (9%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +  L+      L  L   +  ++  I  +     +  +   G ++V+  LG L L+  
Sbjct: 22  YLVWILVLCCGGALTGLSGRSFFTEGNITDLLTSTTVLGLVVVGQTLVI-LLGSLDLSVP 80

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
              ++ +     + +    +    I  + ++S A G++ GL     + +           
Sbjct: 81  FVLSLSSVLAAGVMAGRSENSTAGIVTAILVSLAIGLVNGLLVGLVKINGFIATLGTGLV 140

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +   +   ++  T   +                         +        + +  + M 
Sbjct: 141 VSGYLFTNYRGSTGKASPE---------------------LAAIGSASWGVVPWTTVAMV 179

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
               +  L+L RT        +  +               + A ++S  F G+AG    A
Sbjct: 180 LCLVATALFLNRTRTGLHIYAVGGDPAVTRMSGIRESLPAIVAHSLSGLFAGLAGLVIVA 239

Query: 252 SRDRISPDMFK-FSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                SP++      +++ I+ V++GG         A         L   + F   +SLL
Sbjct: 240 RLGVGSPEVGTQGGYDLLSIAAVVVGG------AVLAGGKGSIWGSLGGILIFATIDSLL 293

Query: 311 KFDCSFNMRHTTLMVIALFLVI 332
                       +  + + + +
Sbjct: 294 GIMEVNPYLKEVVRGLIIIIAV 315


>gi|82544996|ref|YP_408943.1| transport system permease protein [Shigella boydii Sb227]
 gi|81246407|gb|ABB67115.1| putative transport system permease protein [Shigella boydii Sb227]
 gi|320186342|gb|EFW61076.1| putative sugar ABC transport system, permease protein YphD
           [Shigella flexneri CDC 796-83]
 gi|332092726|gb|EGI97795.1| ribose transport system permease protein rbsC [Shigella boydii
           3594-74]
          Length = 332

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/317 (11%), Positives = 89/317 (28%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +     L          +  +  ++ GA    +             +ATL +    +
Sbjct: 88  AFVSVCLAFLLQ--FEVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALR 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                        +   I             + +    L M  L 
Sbjct: 146 GMGLFMTN-------------------ALPVPIDENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|71893582|ref|YP_279028.1| putative ribose ABC transporter [Mycoplasma hyopneumoniae J]
          Length = 330

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 98/323 (30%), Gaps = 27/323 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
            K+L L  ++  +   L +    S  +  ++    +     A G ++V+   G + L+  
Sbjct: 14  TKLLILFLIIAFITGALNVNFFSSYNWFVAILKNNIFIGFIALGQTLVI-LTGGIDLSVG 72

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
                GA  Y++L  + GL    ++ +  +I  A G++ G+   KF+     +    +  
Sbjct: 73  SLIGFGATIYLLLTVKLGLHFVAVLFILIIILAAIGILNGILISKFKIPPFIVTLAGLLS 132

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +   I I  K                    T  +  +   F             ++L   
Sbjct: 133 LRGAIAILLKG-------------------TPITNAQDPIFNFFNYNLGSNFSVLVLVFI 173

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
              A +I +++ +        + DN  A            +  +  S  F  +     ++
Sbjct: 174 ITVAVLIFFIKFSKFGRYVYAVGDNPVAATFSGIKNNKILILVYMFSGIFAILGALSISS 233

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
               +SP+     E   V ++V       L   A           +          +   
Sbjct: 234 GTTSVSPNTGYGFELDTVTAVV-------LGGTALTGGKGGVGKTIIGWFAMALLLNTFS 286

Query: 312 FDCSFNMRHTTLMVIALFLVILM 334
           F    +        I + L IL 
Sbjct: 287 FFQLDSNFQLVAKGIIIVLAILF 309


>gi|304372965|ref|YP_003856174.1| Xylose ABC transporter permease protein [Mycoplasma hyorhinis
           HUB-1]
 gi|304309156|gb|ADM21636.1| Xylose ABC transporter permease protein [Mycoplasma hyorhinis
           HUB-1]
 gi|330723433|gb|AEC45803.1| Xylose ABC transporter permease protein [Mycoplasma hyorhinis MCLD]
          Length = 439

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/350 (12%), Positives = 96/350 (27%), Gaps = 58/350 (16%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   +L +  +++ + L +  G          +       ++ A G+ ++V   G + L+
Sbjct: 62  KKFSMLYIFVIIFAIFLGITNGTLLQPDTFSLLFQNNAYIIILAMGM-LLVILSGNIDLS 120

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +     V + +  G SIWL   ++ +I  A G+I G            +     
Sbjct: 121 VGTLVGLLGLFSVYIYNNTGQSIWLTFILTTLIGAAIGLIQGYLIGYGNIPAFIVTLGGF 180

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                  L      T    G   +  +      +  +     +  S ++  IF   ++  
Sbjct: 181 LAFKGAQLFYSGGSTLTPIGSRSSTYITGTIEGIPDIQVGSVWIFSLILPIIFGAIIVGL 240

Query: 190 MCFLSA----------------------------------------------------SI 197
             +                                                         
Sbjct: 241 RVWGYFSKQKFGIRTQNIYIFIVIQIIIFLLFTGSGVIFGLGTKSMKYFVLYTGIALALF 300

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
               + TA   +   I  N+KA       +    +  F +  A  G +   + A+    +
Sbjct: 301 TFLTQNTAFGRSVYAIGGNRKAAKLSGVNVKRTTMIIFVIIGALAGFSSIIYTATFSSAT 360

Query: 258 PDMFKFSENIIVIS-----IVILGGMTSLSKIAKATAILIGVVELCCGMN 302
                     ++         + GG+ ++S     T+I+  + +    +N
Sbjct: 361 SSRGDDLALDVISVVFTGGASVYGGIGTVSGTILGTSIIGVINQGLLVLN 410


>gi|239943775|ref|ZP_04695712.1| putative sugar ABC transporter permease protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239990228|ref|ZP_04710892.1| putative sugar ABC transporter permease protein [Streptomyces
           roseosporus NRRL 11379]
 gi|291447237|ref|ZP_06586627.1| sugar ABC transporter integral membrane protein [Streptomyces
           roseosporus NRRL 15998]
 gi|291350184|gb|EFE77088.1| sugar ABC transporter integral membrane protein [Streptomyces
           roseosporus NRRL 15998]
          Length = 372

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 85/288 (29%), Gaps = 3/288 (1%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           +  Q   Y + A  +++    + L ++     Y + A    ++G+   L   L I +  +
Sbjct: 58  IINQAGTYYLAALAVAVGF-RMNLFNIGVDGQYRLAAMMAALVGASVDLPGPLHIALIVI 116

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           ++   G      +   +     ++ ++ + +  +I                        T
Sbjct: 117 VAMLVGAFWSGIAGFLKTTR-GVSEVVSTIMLNSIATALVAWMILPKNFGEQPAGSNNLT 175

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
           T       +            +Y                L RT      R    ++ A  
Sbjct: 176 TGEIPESGWFPGLPMADGAGEIYGFTFVAAGCGVLYWFALNRTRFGFDLRATGASESAAQ 235

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           +         L++  +S A  G+AG              F        I+I +L G  + 
Sbjct: 236 ASGVDAKKMVLTSMLISGAVAGLAGMPTLLGDTHTYSLDFPTGIGFTGITIALL-GRNNP 294

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             IA +  ++  + +    ++ Y +   +       +  + ++   L 
Sbjct: 295 LGIALSALLIAFLDKSSASLDQYGYEKEIATIMQGLIVISVVVSYELV 342


>gi|163738489|ref|ZP_02145904.1| inner-membrane translocator [Phaeobacter gallaeciensis BS107]
 gi|163743601|ref|ZP_02150978.1| inner-membrane translocator [Phaeobacter gallaeciensis 2.10]
 gi|161383186|gb|EDQ07578.1| inner-membrane translocator [Phaeobacter gallaeciensis 2.10]
 gi|161388410|gb|EDQ12764.1| inner-membrane translocator [Phaeobacter gallaeciensis BS107]
          Length = 373

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 86/308 (27%), Gaps = 23/308 (7%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I+  + V    L+F       + + + +       +++ A G  +++   G   L+   
Sbjct: 31  GIIGTITVFAMFLIFAGDSGMFNSQGVMNWSQISAQFMIIAVGACLLM-IAGEFDLSVGS 89

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSL------KFRGDYLAIAT 126
                     I     G  +WL I V+  I+ A G + G   +                 
Sbjct: 90  MIGFAGMLIAIFSVTLGWPVWLAILVTFAIATAIGALNGFIVVRTGLPSFIVTLAFLFIL 149

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY------- 179
              +      + +   I                G  + + +  +   + ++         
Sbjct: 150 RGFAIYLPQTIERKTIIGGVADAAEGDWLAALFGGKILTGLFQWFGDNGWIAVFERGTRK 209

Query: 180 ----EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                  +  +++    L     + L +T   N       + +A  +    +   K+  F
Sbjct: 210 GQPVVEGLPMLIVWAILLVIIGHVILTKTRFGNWIFAAGGDAEAARNSGVPVNRVKILMF 269

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAI 290
             ++    +              D     E   +I++VI      GG  S+   A    I
Sbjct: 270 MFTAFCATVFATCQVMEFGGAGSDRGLLKEFEAIIAVVIGGALLTGGYGSVLGAALGALI 329

Query: 291 LIGVVELC 298
              V +  
Sbjct: 330 FGVVQQGL 337


>gi|163940713|ref|YP_001645597.1| monosaccharide-transporting ATPase [Bacillus weihenstephanensis
           KBAB4]
 gi|163862910|gb|ABY43969.1| Monosaccharide-transporting ATPase [Bacillus weihenstephanensis
           KBAB4]
          Length = 322

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/295 (10%), Positives = 81/295 (27%), Gaps = 27/295 (9%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
            + +   +      +  +    +I V+ A G S V+     + ++      + A    +L
Sbjct: 22  FVGVMNPSFVQFSSLSLIMKSSVILVILAIGQSFVL-FTKNIDVSVGSIMGLSAAVCGML 80

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            +    +   +     + +    +     +       +    ++       +L       
Sbjct: 81  LTDGYSAFISIFMAIILGALIGMVNGIGVTKFRVPAIIMTLGMLGIIRGAMLLFTGGKWI 140

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                                      +     I  + +   +  +  +   +  +L + 
Sbjct: 141 ---------------------EDIPNEYKQISSIMMLGIPVTVWTVLIILLLLYFFLMKV 179

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            I   +  + DN+     +   +   K+ AF +S    G+AG  F  +   +        
Sbjct: 180 QIGRYFYAVGDNEDGARLIGIHVDKVKIYAFIISGISAGLAGCIFVMNIGFVPNQTGTGI 239

Query: 265 ENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           E  ++ + V+      GG  S+   A     L  +      +    F +      
Sbjct: 240 ELQVIAAAVLGGIHLKGGTGSIFGAALGAFFLEVISSSLVFLKIPAFWNSAISGF 294


>gi|323357113|ref|YP_004223509.1| ribose/xylose/arabinose/galactoside ABC transporters, permease
           components [Microbacterium testaceum StLB037]
 gi|323273484|dbj|BAJ73629.1| ribose/xylose/arabinose/galactoside ABC-type transport systems,
           permease components [Microbacterium testaceum StLB037]
          Length = 344

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/300 (10%), Positives = 88/300 (29%), Gaps = 28/300 (9%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           + +   +    + I  +     +  + A  +++++   G + L+   + A+G     ++ 
Sbjct: 40  VQIATDSFFGWQNIRGILQDSAVIAIVAIPVAMLL-IAGYIDLSVGSSLALGGVVASLVM 98

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
            +      + I ++ +     G++  +       +        ++               
Sbjct: 99  DKGAGQPAVAIVLAILAGALVGLVNAVIITILGLNSFITTLGTLTA-------------- 144

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                     +  L +         +F    V     +   +     L  +  ++L  T 
Sbjct: 145 -------VRGVAQLISPTPRNNFGDQFGLLGVGTVAGVPLSVWIAALLLIAAGIFLSLTP 197

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
                  +  N++A +     +     + F +S A  G AG   AA  +           
Sbjct: 198 TGRHVYAVGVNRQAAYLSGVPVRRLPFALFVLSGAMSGFAGTIVAARLNSAPAGQLGAGF 257

Query: 266 NIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            ++V++ V+LGG+       ++  +         +      +    F   +    +    
Sbjct: 258 ELVVLTAVLLGGVALTGGEGTIFGVVVGVLFYGALNNSLVLLGVTTFWQAVASGLALVAA 317


>gi|313651036|gb|EFS15436.1| ribose transport system permease protein rbsC [Shigella flexneri 2a
           str. 2457T]
 gi|332765898|gb|EGJ96109.1| branched-chain amino acid transport system / permease component
           family protein [Shigella flexneri 2930-71]
          Length = 325

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/317 (11%), Positives = 89/317 (28%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 22  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 80

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +     L          +  +  ++ GA    +             +ATL +    +
Sbjct: 81  AFVSVCLAFLLQ--FEVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALR 138

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                        +   I             + +    L M  L 
Sbjct: 139 GMGLFMTN-------------------ALPVPIDENEVLDWLGGQFLGVPVSALIMMVLF 179

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 180 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 239

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 240 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 299

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 300 VVRGVIIVVAVLANILL 316


>gi|302338378|ref|YP_003803584.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
 gi|301635563|gb|ADK80990.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
          Length = 393

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/355 (11%), Positives = 99/355 (27%), Gaps = 55/355 (15%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   ++ +L  ++ +   L  G   + +   ++  Q     + A G+ +V+   G + L+
Sbjct: 20  KQYMMVLILGGIWLIFTILTGGLFFTARNYTNLLQQTAYTAIAAMGVVLVI-VAGHIDLS 78

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA---- 125
                 +       L   +G+  ++ I  + ++    G   G            +     
Sbjct: 79  IGSVVGLAGAVAAYLQVYHGMPTFIAILAALLVGALIGAWQGYWISYRNIPAFIVTLAGM 138

Query: 126 ---------------------------------------------TLIMSEIFQNILIKW 140
                                                         L +  +F   +++ 
Sbjct: 139 TLFRGILIYITQGQTISPIWDSFSAIGQGYLPKINNACRIHDSTLYLTVVVVFLYNILQV 198

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
                 +  + +             +     F S F+I    + Y ++ + F++      
Sbjct: 199 SFYLRKQRNLLITLPGALQFIKQLLVSIAIIFFSGFLILYRGIPYSIILVFFVALLYSFI 258

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             +T        I  N++A       I     S F        ++G  F A     +   
Sbjct: 259 ATKTPFGRYVYAIGGNREAARYSGINIRKVNFSIFVSMGILASLSGVVFTARLSSAAAST 318

Query: 261 FKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
            +  E  ++ S +I     LGG  ++        I+  +      MN      ++
Sbjct: 319 GQGFELDVIASAIIGGANPLGGEGTIIGALLGALIMSSINNGMSLMNMSADIQMI 373


>gi|266619266|ref|ZP_06112201.1| ABC transporter, membrane spanning protein [Clostridium hathewayi
           DSM 13479]
 gi|288869181|gb|EFD01480.1| ABC transporter, membrane spanning protein [Clostridium hathewayi
           DSM 13479]
          Length = 335

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 113/302 (37%), Gaps = 16/302 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K +  + L+ ++  +++    G   +   I  +   I++  ++A    +   S G   ++
Sbjct: 10  KNETYILLIILLLSMVIQGISGMFFASNNILDLIRSIIVNAIYALCALLAFISTG-PDVS 68

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
             +  A+ +Y     G+++ L + +LIP++ +I   CG + G   +K+R   L +     
Sbjct: 69  FPMIGALASYLTFAAGNKFDLPVIILIPIALIIGAMCGSVNGFFVVKYRFRSLIVTLATS 128

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +  +         I  G  G   +     L +     +       + +   +   ++++ 
Sbjct: 129 TMCY--------GIIFGAFGGSRSAVPKSLSSLAGWKLFTVTSVRTGLSSVLPGMFLVMV 180

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
             +L   ++L    T +      I  ++ A       +   +   F  +     + G  +
Sbjct: 181 ALYLIVYLVLNF--TTVGRGIYAIGGDEVAAKRAGYNVNAIRFGIFVANGMIAAIGGLAY 238

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           A   +  +P  +   E I++ +IV     + GG+ SL+     T +L  V      +   
Sbjct: 239 ALMSNNCTPTEYYGGEMIVIAAIVLGGVRLTGGVGSLTGCILGTLLLSMVTSSLTMVGIS 298

Query: 305 YF 306
            +
Sbjct: 299 VY 300


>gi|257167902|gb|ACV49725.1| autoinducer-2 ABC transporter permease protein [Klebsiella
           pneumoniae]
          Length = 344

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 89/304 (29%), Gaps = 33/304 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
                V   ++L     A  S + +  +     I  + A G ++V+     + ++     
Sbjct: 12  AFFAIVALFVVLVALNPAYFSLQTLAMIFASSQILCLLALGATLVM-LTRNIDVSVGSTV 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA--TLIMSEI 132
            + A +  +     G  +   I  +  I    G   GL  ++ R   +     TL +   
Sbjct: 71  GLCAIAVGV-ALNNGYGLATAIAFALAIGALAGAFNGLLVVELRIPAIVATLGTLGLYRG 129

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
              +    K I      +       F+G +    +      +   +              
Sbjct: 130 VMLLWTGGKWIEGLPDSLKSLSEPAFIGVSPLGWLVLALLLAGGWLLS------------ 177

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
                     RT     +  + DN  A   L   +   ++ AF ++      AG  FAA 
Sbjct: 178 ----------RTDFGRDFYAVGDNLAAARQLGVAVNRTRMLAFTLNGMLAACAGIVFAAQ 227

Query: 253 RDRISPDMFKFSENIIVISIVILGGMT------SLSKIAKATAILIGVVELCCGMNFYYF 306
              + P+       +  I+  +LGG++      +L         L  +  +        +
Sbjct: 228 IGFV-PNQTGSGLEMKAIAACVLGGISLLGGTGTLLGAFLGAFFLTQIDTVLVLFRLPAW 286

Query: 307 NSLL 310
            +  
Sbjct: 287 WNDF 290


>gi|218515124|ref|ZP_03511964.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           8C-3]
          Length = 320

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 90/324 (27%), Gaps = 21/324 (6%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGI-QILIYVMFAWGLSIVVGSL 63
              L+ +  ++ +  +   L       +        ++ I Q+ +  + A G++ V+   
Sbjct: 1   PTELSIFLVLVGIALIYEALGWMFIGQSFLMNSQRLTIMILQVSVIGIIAVGVTQVI-IT 59

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+      + A                              +  LP+L      L 
Sbjct: 60  GGIDLSSGSVVGMTAMIATSFAQSSTWG-----------RAVFPSLTDLPALVPIMIGLL 108

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           I           I     P      G++V+ R      T    +        F+  + + 
Sbjct: 109 IGAAAGLANGALIAYTKIPPFIATLGMFVSARGVAKWYTKGHPVSGITEQFHFIGTKAWP 168

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
             V L +        + LR T        I  N +A       I    +  + ++    G
Sbjct: 169 VVVFLVVA---LIFHIALRYTRYGKFTYAIGANPQAARVSGINIEAHLVKVYVIAGLLAG 225

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +AG   AA  +     M    E   + + VI      GG+  ++     T IL  +    
Sbjct: 226 LAGIVTAARAETAQASMGVGYELDAIAATVIGGTSLTGGVGRITGTVIGTIILGVMTSGF 285

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTT 322
             +    +   +            
Sbjct: 286 TFLRIDAYYQEIVKGFIIVAAVVI 309


>gi|182440397|ref|YP_001828116.1| putative sugar uptake ABC transporter permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|178468913|dbj|BAG23433.1| putative sugar uptake ABC transporter permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 325

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 85/291 (29%), Gaps = 30/291 (10%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +        L   LF     +   + +  +Q+   V+ A G+++V+G+ G + L+     
Sbjct: 29  VYAAVAAVLLFNALFTEHFMTADNLRTQLVQVAPIVIVALGMALVIGTEG-IDLSVGSTM 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A    +      +   L+  ++  + GA                     L+     Q
Sbjct: 88  ALAAALLPLYLGYGLVPALLIALLAGALVGAVNGT-----------------LVSLVGLQ 130

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+        G            +       I      +      + +  V+L    L+
Sbjct: 131 PIVATLALFVGG------RGLALVMADGRLKQIVNPDILALGTGSFLGIPTVVLIAGVLA 184

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            ++   ++RT        I  N+ A       +    +  + +      +AG    A   
Sbjct: 185 LAVAFLVQRTTFGRQIVAIGGNRSASALSGLPVKRVLIGVYVLCGVMAALAGILATARLT 244

Query: 255 RISPDMFKFSENIIVISIVILGGM----TSL--SKIAKATAILIGVVELCC 299
              P        +  I+ V++GG      S+          ++  +     
Sbjct: 245 ASDPSSLGTLMELSAITAVVVGGTPLNGGSIRVLGTVAGALLMQLLRATLV 295


>gi|217976264|ref|YP_002360411.1| inner-membrane translocator [Methylocella silvestris BL2]
 gi|217501640|gb|ACK49049.1| inner-membrane translocator [Methylocella silvestris BL2]
          Length = 292

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 91/288 (31%), Gaps = 10/288 (3%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +  +    Y +FA G ++  G L +++L     ++ GAY  +            L   
Sbjct: 6   IINGFVAGSAYALFALGFTLTFGVLKIVNLTYGFYFSAGAYLALFAALHGAPIALALPLA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +        ++      + R         +M  +   + +         + I        
Sbjct: 66  AFATGLIAVVLDSALLSRLRQQQAPELASLMITLGATLFLYTGMTALIGSEIRRFP---- 121

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  LI    F  +     +    +++    L+A++I  LR T    A R + +N +
Sbjct: 122 -----IGLIEAAPFRLNGASISLTQIIIVVTAGLLAAALIGVLRATRTGLAMRAMAENPQ 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +             +  A  G +G       + I+P M   +  +   +++ILGG+
Sbjct: 177 AAELMGINTGAIMRRVSFLCGAIAGASGVLIGLEHNAITPYM-GETMALKGFAVIILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
             +     A  ++  +  L  G     +   + F             +
Sbjct: 236 GDVGGALIAGLLIGLLEALTAGYVSSVYKDAVGFLLLVLTLWARPFGL 283


>gi|166031584|ref|ZP_02234413.1| hypothetical protein DORFOR_01284 [Dorea formicigenerans ATCC
           27755]
 gi|166028561|gb|EDR47318.1| hypothetical protein DORFOR_01284 [Dorea formicigenerans ATCC
           27755]
          Length = 361

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/318 (12%), Positives = 91/318 (28%), Gaps = 28/318 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFL----------GATKSQKYIDSMGIQILIYV 50
           M++FS +         LL  V+ L+               G      Y+ ++        
Sbjct: 13  MNMFSGKQILIPIAALLLLAVFNLIADPSFYKISMDVNSAGNHVLSGYLITILDYGSELA 72

Query: 51  MFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIM 110
           + A G+++V  + G   ++     AI     + +          L     +      ++ 
Sbjct: 73  ILAIGMTLVTAASGGQDISVGAGIAIAGSVILRVLCGTNSRPDKLQAPIIVAFLVACVVS 132

Query: 111 GLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
            L              L+     Q ++      T G++     +       +  +   F 
Sbjct: 133 MLFGA-------FNGILVAGFKIQPMVATLILYTAGRSIAAWINNNELPVVSDPTFAYFG 185

Query: 171 RFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
            F        I +             I L ++ T +    + +  N+ +         F 
Sbjct: 186 GFIPG-----IPIPTPFFIAVACMIVIALAMKFTNLRLYTQAVGINEHSSRLNGLNPAFI 240

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT------SLSKI 284
           K  +F +    + +AG    +    I+  +      +  I  V LGG +      +++  
Sbjct: 241 KFLSFVILGLCVAVAGLIKVSRISSINYSVIAKDIEMDAILAVALGGNSLSGGKFNMTAS 300

Query: 285 AKATAILIGVVELCCGMN 302
                ++  +       N
Sbjct: 301 ILGAYVIQFLTTTLYKFN 318


>gi|212696640|ref|ZP_03304768.1| hypothetical protein ANHYDRO_01181 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676371|gb|EEB35978.1| hypothetical protein ANHYDRO_01181 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 311

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 79/266 (29%), Gaps = 7/266 (2%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G++++       IGA         Y  + WL      +     G+I  + S+ F GD  
Sbjct: 34  SGVVNIGLEGMMTIGALVAA-TVGYYVGNPWLGFLAGGLAGMFFGLIHAIVSVTFAGDQT 92

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
                I +      L   +   +G            +      LI+     + F  Y   
Sbjct: 93  ISGIAINTLAPGLALFLARLFFDGATQTPSIPLENKIPRLFDGLIKNQGLKNIFSQYATV 152

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
              ++         + ++L +T        + ++ KA  +L+ ++   +  A   S    
Sbjct: 153 YLALISV-----ILLYVFLYKTKWGLRLIAVGEHPKAAETLDISVRKIRYLAVMFSGFMG 207

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+ GA  + +   +        +  I +  VI G       +   +        +   + 
Sbjct: 208 GLGGASMSLAVVSVFSPTLIAGQGYIALVCVIFGNW-KPQGVLIGSLFFGLTQAIATYLT 266

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIAL 328
                  ++F          L +I  
Sbjct: 267 GTSIQLPMEFISMIPYISILLFLILF 292


>gi|152969082|ref|YP_001334191.1| putative inner-membrane translocator [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|206576711|ref|YP_002239881.1| sugar ABC transporter, permease protein [Klebsiella pneumoniae 342]
 gi|290510224|ref|ZP_06549594.1| simple sugar transport system permease [Klebsiella sp. 1_1_55]
 gi|150953931|gb|ABR75961.1| putatiive bacterial inner-membrane translocator [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206565769|gb|ACI07545.1| sugar ABC transporter, permease protein [Klebsiella pneumoniae 342]
 gi|289776940|gb|EFD84938.1| simple sugar transport system permease [Klebsiella sp. 1_1_55]
          Length = 340

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 97/326 (29%), Gaps = 25/326 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFL-----GATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           ++ K   I  ++ V+                  +   +  + +Q+ I  + A G++ V+ 
Sbjct: 21  KMPKDTGIFVVMLVIALTFEIAGWYVRDQSFLLNTNRLVLIVLQVAIIGIIAVGVTQVII 80

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           + G + L+              + +   +    L   S  +S     ++ LP++      
Sbjct: 81  TTG-IDLSSG-----------SVIALAAVVAASLAQTSDSLSPMFPALVNLPAVIPICAG 128

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           + +  L        +     P      G+ V+ R      T  + I F     + +    
Sbjct: 129 IGVGLLCGLTNGFLVTRTGIPPFIATLGMMVSARGLAQYYTQGNPISFLSDSFTAIGQGA 188

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
               +   +    A   + L+ T        I  N  +       +    +  + ++ A 
Sbjct: 189 MPVIIFFVIA---AVFHIALKHTRYGKYVYAIGGNMTSAKVSGINVNKYLVIVYTIAGAL 245

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+AG   AA        M    E   + + VI     +GG+  ++       IL  +  
Sbjct: 246 SGLAGVVLAARVSSGQSSMGMSYELDAIAAAVIGGSSLMGGVGRITGTLIGAMILGLIKS 305

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               +    +   +          T 
Sbjct: 306 GFTFVGVDAYVQDIIKGIIIVAAVTI 331


>gi|259418150|ref|ZP_05742069.1| inner-membrane translocator [Silicibacter sp. TrichCH4B]
 gi|259347056|gb|EEW58870.1| inner-membrane translocator [Silicibacter sp. TrichCH4B]
          Length = 328

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/324 (11%), Positives = 102/324 (31%), Gaps = 33/324 (10%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV----------------- 82
            +  +  ++Y + A G  ++  + G+ +    +     A + V                 
Sbjct: 13  LNGLMAGVLYALVALGFVLIYKASGIFNYAQGVMALFAAMTLVGIMQGQVPFSHVINAVF 72

Query: 83  ---ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              I    + +  ++ I ++  +      ++ +  +K       I   + +      L  
Sbjct: 73  GGHITHFGWTVPSFVAILMTVAVMVLLAWLVQVLVMKHLVGQEPIILFMATIGLAYFLEG 132

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +  G     +   L            F  F   F I  + +   ++    ++  ++L
Sbjct: 133 VADLMWGSEIKTLDVGLPQGINLWIDETTFGIFGYGFFIDNLDIVATVIAALLVT-GLVL 191

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           + + T    A R + D+ +A  S+  ++ F  +  ++V+     +AG  +          
Sbjct: 192 FSQYTKQGRAMRAVADDHQAALSVGISLNFIWVLVWSVAGFVALVAGIMWGTKSGVQFSL 251

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                  +  + +++LGG TS+        I+    +L   +         +   +    
Sbjct: 252 S---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFLIGPMVGGATENWFA---- 304

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
                 +   + ++ R   L   +
Sbjct: 305 -----YVLALIFLVFRPQGLFGEK 323


>gi|84499454|ref|ZP_00997742.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Oceanicola batsensis HTCC2597]
 gi|84392598|gb|EAQ04809.1| ABC branched chain amino acid transporter, inner membrane subunit
           [Oceanicola batsensis HTCC2597]
          Length = 294

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 84/301 (27%), Gaps = 21/301 (6%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +     +   + A GL++V G L +L+ +    + IGAY    +  ++G  I L   + A
Sbjct: 11  NALNWAMATFLVASGLTLVFGILHVLNFSHGGFFMIGAYVAHTVLVQFGFDIPLWAYLIA 70

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
            +  A  +      +             +  +     +          G   A       
Sbjct: 71  AVLAAVVVGAAGTGVDRLIFQRLKNLDGIYVLIATYALLLVC-----NGFVKAVWGLNYL 125

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
           +             +  I   F  +V+         +   L  T I    + I  +    
Sbjct: 126 SVSPPEGLGGAIFFADAILPTFSVFVIGCGILTFLLLEAVLNHTTIGRTLQAIAVDPWMA 185

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
             +   +            A  G+AG    A++         F        +VI+GGM S
Sbjct: 186 RVIGIDVSSVYRWTMIAGFALAGLAGGLLVANQSLSPDLAGIFVLQ--AFGVVIVGGMGS 243

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLL 340
           +     A+ +L  V  L                         L    +  V+++    + 
Sbjct: 244 IRGAFVASILLGLVEALSAVF--------------LPDYPGVLFFATIAAVLIISPGGIF 289

Query: 341 R 341
            
Sbjct: 290 G 290


>gi|110632624|ref|YP_672832.1| inner-membrane translocator [Mesorhizobium sp. BNC1]
 gi|110283608|gb|ABG61667.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Chelativorans sp. BNC1]
          Length = 330

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 88/302 (29%), Gaps = 25/302 (8%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV-GSLGLLSLNCVIAYAIGAYSYVILGS 86
           +      S + I  + I   +  + A G ++V+ G    + L+     ++ A     + +
Sbjct: 40  MLSPGFASPQQILRLLIVAALLGIVAAGQNLVILGGREGIDLSVGGIVSLSAIIAGNVMN 99

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
                I   I          G   G+     R   L +                     G
Sbjct: 100 GADSGILPAILACVAAGALFGTFNGIGVTLLRIPPLVMTL-------------------G 140

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             G+     +                      + + +  ++     +   +   LRRT  
Sbjct: 141 MLGVLQGLLVVIRQGVPSGRAAPALSEFVTRPFLLGLPGIIWLWVLIGLLMAFLLRRTVF 200

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                 I  N++A F     +   ++S F +S AF G+AG            ++ +    
Sbjct: 201 GYRVYAIGSNEQAAFLAGVPVRLIRISLFTLSGAFAGLAGLCLIGYAGSSFANVGELYML 260

Query: 267 IIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             +I++V     + GG    +       +L+ +  +   +N       + F  +  +   
Sbjct: 261 PSIIAVVLGGTPLSGGKGGYTGTMAGAVLLVILQSILTTINIDESGRQMIFGATLLVLML 320

Query: 322 TL 323
             
Sbjct: 321 FY 322


>gi|121610349|ref|YP_998156.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121554989|gb|ABM59138.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 316

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/318 (13%), Positives = 97/318 (30%), Gaps = 27/318 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R+ +    + L  +   LL  L   A  +   + ++ +Q+ I  + A+G++ V+  LG +
Sbjct: 9   RIARRYGGILLGLIALVLLFALLSPAFLTTGNLLNIVLQVSIIAIVAFGITYVL-LLGEI 67

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+      +L +R    +W++   + +  G     +        G    I T
Sbjct: 68  DLSVGAIIALCGSVAGLLLAREMPLLWVV--GATLACGLVLGAVNGALSALLGIPSFIVT 125

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           +    IF+ +                          V             +   + ++ +
Sbjct: 126 VATMGIFRGLAFIASDGM---------------PVPVDDEAFIRIGNGHMLGLPVPIWIL 170

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
              +      +     +T           N +A       +   K++ F +S     + G
Sbjct: 171 AALLALNHCVL----SKTVFGRKAYLAGGNAEAAVYAGIRVKRLKIAIFTLSGLMAAVGG 226

Query: 247 AFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
               A      P+     E   + + V     + GG  ++        I+  +      M
Sbjct: 227 MVLTARLYSAQPNAALGWELDAIAAAVLGGTSLAGGYGTMVGTLIGALIIGVINNGMNLM 286

Query: 302 NFYYFNSLLKFDCSFNMR 319
           +  YF  L+       + 
Sbjct: 287 SVPYFYQLIVKGAVILVA 304


>gi|86749391|ref|YP_485887.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gi|86572419|gb|ABD06976.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 289

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 83/300 (27%), Gaps = 25/300 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
               ++    + GLSI++G + +++L       IG Y         G+S  + I ++ + 
Sbjct: 13  LAYGMVLFTISIGLSIMMGLMRVVNLAHGAFAMIGGYLASFALVSLGVSYPVAILIAVIG 72

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +    +       +         T I+  I     I          G+            
Sbjct: 73  AVIISVPFEFLLYRRIYRKSDELTQILLTIGITFFI---------VGVANYIFGPTSKPI 123

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
               +    F     +      +V+      + ++ L + +T      R   DN     +
Sbjct: 124 PLPELLKGPFDLGVRMIPTHRLFVIGCGVVTAVALWLLIEKTEFGVRLRAAVDNGDMAEA 183

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L         + FA++       G   A          +     +  + +V +GG  S+S
Sbjct: 184 LGIRTQIVYSATFALAVGLAAFGGVVGAELLPV--EPFYALRYMVTFLVVVSVGGAGSVS 241

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                              +     +                 +A+ +++ +  H L   
Sbjct: 242 --------------GALAASLLLGLADTTGKYLAPEFGEFFFYVAVIVIVYIFPHGLFGR 287


>gi|71906009|ref|YP_283596.1| inner-membrane translocator [Dechloromonas aromatica RCB]
 gi|71845630|gb|AAZ45126.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Dechloromonas aromatica RCB]
          Length = 291

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/307 (10%), Positives = 94/307 (30%), Gaps = 27/307 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ S       Y + A G +++  +  +++        +G     +  ++ GL + + +
Sbjct: 7   QFLFSGITVGATYALAALGFTLIYNASNVINFAQGEFIMLGGML-AVFFTQAGLPLPVAL 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ +I    G+I+   +++       +  +I++     ++     +  GK         
Sbjct: 66  VLAILIPAIVGVIIEKLAIEPVKGAETVTLIIITIGASLVIRGLTAVIFGKNTHS----- 120

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + +                   +VL     +   +  +  RT    A      N
Sbjct: 121 ------LPAFSGETPIDILGATLMPQSLWVLGITALVVVVLWYYFNRTLQGKAMLATSYN 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +     +    +FA+S+A   + G         ++         +      +LG
Sbjct: 175 RLAAELVGINTGWVLFMSFAMSAALGALGGILITP--ITLTSYDVGIMLGLKGFVAAVLG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ +         ++  +  +  G     +   + F             + +  ++    
Sbjct: 233 GLGNGLGAVVGGLLVGILEAMGAGYISSAYKDAIPF-------------VLILFILFFMP 279

Query: 337 HSLLRLR 343
             L   +
Sbjct: 280 RGLFGGK 286


>gi|302386198|ref|YP_003822020.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
 gi|302196826|gb|ADL04397.1| inner-membrane translocator [Clostridium saccharolyticum WM1]
          Length = 339

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/297 (11%), Positives = 86/297 (28%), Gaps = 18/297 (6%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             +Q  + ++   + I  + A GL+  +   G+  L+            +     + ++I
Sbjct: 47  FLTQSNMITILRAVSITTIIAIGLTFALAVNGM-DLSIGATAQFANVFVMTCFVWHNINI 105

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            + + ++ +I  +  +I  +  +KF+   +  A            +    +  G +  Y 
Sbjct: 106 GVSVILTVLICLSVAVINSILIVKFKIPDMVAA------------LSVMFMYQGVSMTYS 153

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                    T     +                ++++ M  +      +L  T        
Sbjct: 154 KGGAITERMTRADGTQAPGLVPEAFRALGKEPWLIIIMICVVLFAYFFLNYTKHGRYMYA 213

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +  N +A       +   K+ A+ +S+ F  + G   AA                 V + 
Sbjct: 214 VGGNPEAAQLSGIPVAKYKILAYFLSATFASIGGICLAARVGTAQISAGDAYLMPSVCAA 273

Query: 273 -----VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
                V+  G  +         ++  +      M+  Y+   +       +      
Sbjct: 274 YIGFSVMGAGKANAFGTFAGAVLVGMLENGLIMMSVPYYAMNIIKGAVLAIALAMTY 330


>gi|86358014|ref|YP_469906.1| ribose ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86282116|gb|ABC91179.1| ribose ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 326

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 97/312 (31%), Gaps = 21/312 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   + L        S +   ++  QI +  + A G++ V+   G + L+   A A
Sbjct: 27  LVGLLALCIFLSFSTDTFLSVRNGLNILDQITVLGIMAVGMTFVILIGG-IDLSVGSALA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +         +  GL + + I  + + S   G+I+GL   +FR                 
Sbjct: 86  LAMMVMGWTANVAGLPLPVGIAFALIASAVSGLIVGLLVTQFRVPAFIAT---------- 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  + +   G+                         F +    ++ +L  +     
Sbjct: 136 -----LAMMSAARGVANMITDGQQIVGFPDWFMMLAIDRHFGVMTATVFLMLAVVLAAWL 190

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +               +  N +        +    +S + VS+   G+AG   AA  D 
Sbjct: 191 FLHFRSE----GRMLYAVGGNPEVARLAGINVPLVTISVYVVSAVLAGLAGIVLAARLDS 246

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           + P        +  I+ V++GG +           LIGV+ +    N     ++  F   
Sbjct: 247 VQPSS-GLGYELDTIAAVVIGGTSLSGGAGGIGGTLIGVLIIGVLRNGLNLLNVSPFLQQ 305

Query: 316 FNMRHTTLMVIA 327
             +    ++ + 
Sbjct: 306 VIIGIVIVLAVG 317


>gi|297160426|gb|ADI10138.1| ABC transporter membrane protein [Streptomyces bingchenggensis
           BCW-1]
          Length = 355

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/320 (12%), Positives = 94/320 (29%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +    + A+   +  F      +      ++  Q     + A  +S+++   G   
Sbjct: 33  LARPEIGALVAAIGVYIFFFAAAPTFRQADSFATVLYQGSTIGIMALAVSLLM-IGGEFD 91

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A    A +  +L  +   ++W+ + V+ ++S   G+I G+  +K       + TL
Sbjct: 92  LSAGVAVTSSALTASMLSFQLTTNVWVGVLVALVVSLVVGLINGVLLIKTGLPSF-LVTL 150

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               + Q   +    +          + +                    V   +  +   
Sbjct: 151 ASFLMLQGANLAVTKLLTDNVATDPINDMDGFDQAKSVFASEISIGGVDVKITVLWWLFF 210

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +            RT   N    +  ++++  ++   + F K++ F          G 
Sbjct: 211 AAIATWVLL------RTKFGNWIFAVGGSKESARAVGVPVTFTKIALFMTVGFAAWFVGM 264

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
                 + +       +E   +I+ VI      GG  S         I   V +     N
Sbjct: 265 HLLFEYNTVQAGEGVGNEFYYIIAAVIGGSLLTGGYGSAIGAVLGAFIFGMVNQGIVYAN 324

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
           +              +    
Sbjct: 325 WNPDWFKFFVGVMLLLATLV 344


>gi|118470376|ref|YP_890242.1| xylose transporter permease XylH [Mycobacterium smegmatis str. MC2
           155]
 gi|118171663|gb|ABK72559.1| xylose transport system permease protein XylH [Mycobacterium
           smegmatis str. MC2 155]
          Length = 439

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 45/345 (13%), Positives = 98/345 (28%), Gaps = 60/345 (17%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             S   + ++  Q     + A GL  V+  LG + L+  +A  + A +  +     G   
Sbjct: 81  FLSALNLANLITQAGSICVLAMGLVFVL-LLGDIDLSAGVAGGVAACAMALAVVNLGWPW 139

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
           W  + V+       G+I+G+   K       + TL      Q + +K             
Sbjct: 140 WAAVLVAIACGAVIGLIIGVLRAKLGIPSF-VVTLAFFLGLQGVTLKLIGEGGSVRVDNP 198

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY---------------------------- 184
             R   +     ++              + +Y                            
Sbjct: 199 VIRGLTIANLPVAVGWTIALVVVLAFAGLEIYNYRRKKALQLTHSPLGVVVARAIAVAVV 258

Query: 185 ------------------------YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
                                   YVL  +  L   + + LRRTA       +  N +A 
Sbjct: 259 VLGVTFVLSVNRSVNPRVEIRGIPYVLPLILLLLIGMTVLLRRTAYGRHIYAVGGNAEAA 318

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
                ++   +++AF   S+   ++G   A+   ++S      +  +  +   ++GG + 
Sbjct: 319 RRAGISVDRIRVTAFIACSSLAALSGIIAASYAGKVSASSGAGNTLLYAVGAAVIGGTSL 378

Query: 281 LSK------IAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                          ++  +      +N   + + L       + 
Sbjct: 379 FGGKGRALDAVIGGVVVATIANGLGLLNQSSYINFLVTGGVLLLA 423


>gi|271501714|ref|YP_003334740.1| inner-membrane translocator [Dickeya dadantii Ech586]
 gi|270345269|gb|ACZ78034.1| inner-membrane translocator [Dickeya dadantii Ech586]
          Length = 330

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/339 (13%), Positives = 100/339 (29%), Gaps = 24/339 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++ N    I   + V+  L          S + I ++        + A G++ V+   G 
Sbjct: 2   IKRNLPLMITLAVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIVAVGMTFVI-LSGG 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A            +GLS  +  P+  ++  A G  MGL     +     I 
Sbjct: 61  IDLSVGSVIAFTGVFLAKAIGVWGLSPLVAFPLILLMGCAFGAFMGLLIDALKIPAFIIT 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L     +      +                   +  P    +  + +  
Sbjct: 121 -----------LAGMFFLRGASYLVSKESLPINHPIYETLSSLAWTIPGGGRLSAMGLLM 169

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +++ +  +  +     R T   N    I  N  +   +  +     L  + +S+    +A
Sbjct: 170 LMVVVVGIVLA-----RYTRFGNQVYAIGGNSTSANLMGISTRSTTLRIYMLSTGLATLA 224

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  F+         +      +  I+ V++GG         +  +   +  L        
Sbjct: 225 GIVFSIYT-SAGYALAGVGVELDAIASVVIGG------TLLSGGVGTVLGTLFGVAIQGL 277

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
             + + FD + +   T + +  L  V +     L  L  
Sbjct: 278 IQTYINFDGTLSSWWTKIAIGILLFVFIALQRGLTALWE 316


>gi|261341024|ref|ZP_05968882.1| ribose ABC transporter, permease protein [Enterobacter cancerogenus
           ATCC 35316]
 gi|288316889|gb|EFC55827.1| ribose ABC transporter, permease protein [Enterobacter cancerogenus
           ATCC 35316]
          Length = 327

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/243 (13%), Positives = 80/243 (32%), Gaps = 21/243 (8%)

Query: 35  SQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWL 94
           + + I ++ +Q  +  + A G++ V+ + G + L+     A       +  +        
Sbjct: 47  NTENIMTIALQTAVIGIMAIGVTFVIITAG-IDLSLGSVVAFSG--VAVGTAAGFGLPLP 103

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
           +  ++ +++G     M    +        IATL +    +           G   +    
Sbjct: 104 VCILAGVLAGGVCGYMNAFLVTKMTIPPFIATLGLMMSVR-----------GINMVMTDG 152

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
           R  +     +  +         + Y +F   ++          +  L++T +      + 
Sbjct: 153 RAIYFSDYPQFRMLAQGRLFDVLPYPVFYLVIVA------LIAMWILKKTVMGRYIYAVG 206

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
            N+ A       +   K+  +A      G+AG   A+  +            +  I+ V+
Sbjct: 207 SNETAAHLSGINVQRVKIFVYAFCGLLTGVAGVILASRLNS-GQPTVGVGYELEAIAAVV 265

Query: 275 LGG 277
           +GG
Sbjct: 266 IGG 268


>gi|116249695|ref|YP_765533.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115254343|emb|CAK03971.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 353

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/322 (11%), Positives = 95/322 (29%), Gaps = 12/322 (3%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
               + +L  +  +   +   A  +   + S+   + +  +   G+++ +   G   L+ 
Sbjct: 35  RAGAVFILLALLVVGFTVAEPAFINIANLMSILQAVSVVAILGAGVTVTLAVGG-FDLSI 93

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A    +       +GL  +  +P+        G++     ++ +   L +ATL M 
Sbjct: 94  GAVAASSVMAASYAMIVWGLDAYATVPLVLAFGALVGLVNAFLIVRLKVPDL-LATLAMM 152

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +   + +      +  AG+ + D      +                     +   ++ M
Sbjct: 153 FLLSGLQLIPTAGRSISAGLTLPDG-----SKATDAFDPAFLLIGRYSILGTLPVSVVLM 207

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++ ++ +   RT I         N+ A      + +  K  A+ +S     + G   A
Sbjct: 208 AVVAIALFILTERTRIGRLLFATGGNEVATRLAGASTVRLKTLAYVLSGTLASLGGIVIA 267

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGM-----TSLSKIAKATAILIGVVELCCGMNFYY 305
           A   R             V + +I   +      ++         +  ++     +N  Y
Sbjct: 268 ARVGRGDISSGGSLLMDSVAAALIGFAVFNLRRPNVFGTIAGAVFVGVLLNGLTMLNAPY 327

Query: 306 FNSLLKFDCSFNMRHTTLMVIA 327
           +                   + 
Sbjct: 328 YTQDFVKGAVLVGALALTYGLG 349


>gi|325263587|ref|ZP_08130321.1| ribose ABC transporter, permease protein [Clostridium sp. D5]
 gi|324031296|gb|EGB92577.1| ribose ABC transporter, permease protein [Clostridium sp. D5]
          Length = 330

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 94/289 (32%), Gaps = 24/289 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++ ++  +++     +  + K I  M     + ++   G+  V+     + ++     
Sbjct: 19  LLIVLIILCVVISFRSPSFMTLKSISDMLKNNAVIMIMTLGMLGVLLLG-GIDISIASTL 77

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A    S  +L     +    L+ V A+  GA   ++    +        IAT+    I++
Sbjct: 78  AFSGMSVGMLLKYNVVENAFLLFVIAIGIGALCGLVVGLVIAKGKVLPIIATMGFMYIYR 137

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +                        +   S      F +  +   + +  V+L M    
Sbjct: 138 GMAYMI------------------GNSQWASAENLGDFKNFALGKVLGINNVVLIMFACY 179

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + ++ T +      +  N++A           +L  + V     G+ GA   A   
Sbjct: 180 IIFFVVMKWTKVGRKVYAVGSNREAAAISGINTSNVELMVYTVMGTLAGLCGALAVAVYS 239

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
              P+M    E  ++ + VI      GG  S+      + IL  + +  
Sbjct: 240 SAQPNMLYGKEMDVIAACVIGGVSMTGGRGSVVGAFLGSLILAIIAKAL 288


>gi|238027295|ref|YP_002911526.1| branched-chain amino acid ABC-type transport system, permease
           [Burkholderia glumae BGR1]
 gi|237876489|gb|ACR28822.1| Branched-chain amino acid ABC-type transport system, permease
           component [Burkholderia glumae BGR1]
          Length = 304

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/276 (11%), Positives = 76/276 (27%), Gaps = 10/276 (3%)

Query: 55  GLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPS 114
           G ++V G LG ++L       +G Y  +   +    +    +     ++        +  
Sbjct: 21  GFTLVFGVLGRVNLAYGATVMLGLYVAIRATAALPPAAAFALAPLVAVAVTVLANRYV-- 78

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
                         ++ +  +  +  +    G   +      +                 
Sbjct: 79  -DLLCFAPHRDGSGVTAMAASFAVWMQIEEAGAHLLSAHANPWPSPFASLPASWQALPLR 137

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
           +     +    ++   C         + RT    A R I D++ A       +       
Sbjct: 138 AEHGLALGCAALVTFGCR------RLIERTRFGLAVRAIVDDRAAATLAGVDVRRVSARV 191

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
            A+S+A   +AG   A    ++S     ++  +  ++  ++GG  SL         L  +
Sbjct: 192 VALSAALGALAGCLIAGIHGQVSAMFAMWA-TLKGLAAAVIGGFGSLPGAVAGGLALGLI 250

Query: 295 VELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
                 +       L      F         +A  L
Sbjct: 251 EAALQALFGAQARDLGGDLLLFAALCAWPGGLASLL 286


>gi|187920892|ref|YP_001889924.1| monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
 gi|187719330|gb|ACD20553.1| Monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
          Length = 333

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/321 (11%), Positives = 92/321 (28%), Gaps = 30/321 (9%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
           +I  +  ++      +      +   + ++   I    + A+G  I++   G + L+  +
Sbjct: 29  RIFAVALILCVYFETVNHDFLLTGASLQNLSQFIAPVAIIAFG-EIMLMIGGEIDLSAGM 87

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            +A   +         GL  WL +    + +G  G+I G  ++  R              
Sbjct: 88  VFAFAPFIMYF-AIEAGLPPWLGMLAGVVAAGIVGLINGAVTVYLRIPSFVT-------- 138

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
                           G         L  +  + +      +       + Y  ++    
Sbjct: 139 --------------TLGTLFFVNGLTLTISRGTPVSPPENSAFAAFMGGWGYSEIIWTLA 184

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L+A + + LR T           N          +   KL  F +++   G+ G      
Sbjct: 185 LAAFMHVLLRHTRWGLHTIASGANPLGASEAGIQVRRLKLGNFILAALLAGLTGILEGFR 244

Query: 253 RDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYF 306
              I P         + ++  ++GG        ++       A+L  + +    +    F
Sbjct: 245 ITSIDPQAGGNQIMFLAVAAAVIGGTPLAGGSGTIIGGLIGAAVLGILNDGFTLIGINAF 304

Query: 307 NSLLKFDCSFNMRHTTLMVIA 327
              +    +        + + 
Sbjct: 305 TFNMILGAAILGAMIFNIHVV 325


>gi|5616305|gb|AAD45714.1|AF160811_2 L-arabinose membrane permease [Geobacillus stearothermophilus]
          Length = 407

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/350 (11%), Positives = 98/350 (28%), Gaps = 55/350 (15%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  L ++  L   L  G       I ++ +Q    ++ A G+ +V+   G + L+
Sbjct: 33  RSYSMVIALILIMLLFQVLTGGILLRPLNITNLILQNSYILVLAVGMMLVI-ITGHIDLS 91

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD--------- 120
                A       IL  ++  S+WL + +  ++    G   G      +           
Sbjct: 92  VGSVAAFVGALAGILMVQHHASVWLTVLICLLLGALIGAWQGFWVAYVKIPSFIVTLAGM 151

Query: 121 ----------------------------------------YLAIATLIMSEIFQNILIKW 140
                                                   +L    +  +     ++++W
Sbjct: 152 LLFRGLTMVILEGQSIAPFPKTFQNMSSGFLPDVFHGGEIHLFTIVIGFAASLLFVVLEW 211

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           +   + K   +           +  +       +  +     +  +L+ +  L  +    
Sbjct: 212 RKRNSQKKYGFAVTPAAMFALKLAVIAAVIMIFTYILATYERIPTILVILVALIIAYSFV 271

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             RT +      I  N+KA               F        ++G  FAA  +  +P  
Sbjct: 272 ANRTVVGRHIYAIGGNEKAAQLSGIKTKRVTFWVFVNMGVLAALSGLIFAARLNAATPKA 331

Query: 261 FKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
               E   + +  I      GG+ ++S       ++  +      +    
Sbjct: 332 GNLFELDAIAACFIGGASAYGGIGTISGAIIGGLVMGVMNNGMSLLGLGI 381


>gi|148548214|ref|YP_001268316.1| inner-membrane translocator [Pseudomonas putida F1]
 gi|148512272|gb|ABQ79132.1| inner-membrane translocator [Pseudomonas putida F1]
          Length = 293

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 92/306 (30%), Gaps = 24/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   +Y + A G  ++  + G+ +          A ++ +     GL   L + +
Sbjct: 8   LIGGLLAGTLYSLVAIGFVLIYKASGVFNFAQGAMLLFAALTF-VSLHEQGLPFALALAL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++     +++    L+   +   I   + +     I+        G            
Sbjct: 67  TVLVMIVGALLIERLVLRPLVNRSQITLFMATLGLSFIIEGLAQGLMGAQ---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F          L A + L   +T I  A R + D+ +
Sbjct: 117 -VRALDLGIEDVPLFVGELMISQFDLVASGVSALLVAVLALLFNKTRIGVALRAVADDTR 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL   +       +AV+     +AG  + A +             +  + ++I+GG 
Sbjct: 176 AALSLGINLNRIWQIVWAVAGMVGLVAGLLWGARQGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+     L            +    +              + + +R   
Sbjct: 233 TSIGGAIVGGLIVGAAENLAEAYIGPLIGGGITPWFA---------YFLALIFLYIRPAG 283

Query: 339 LLRLRT 344
           L   RT
Sbjct: 284 LFGDRT 289


>gi|300174146|ref|YP_003773312.1| nucleoside ABC transporter permease [Leuconostoc gasicomitatum LMG
           18811]
 gi|299888525|emb|CBL92493.1| Nucleoside ABC transporter, permease protein [Leuconostoc
           gasicomitatum LMG 18811]
          Length = 378

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 84/309 (27%), Gaps = 1/309 (0%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L   A  S + I  +  Q+   ++ A G + V  + G  ++        G    V    
Sbjct: 39  ALLGSAFGSMQDIGGVLTQMTPLILTALGFT-VAQTAGFFNIGLSGQALAGWVGAVWYSL 97

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +      L+  SA+I GA    +      +       + +I++ +   IL+        
Sbjct: 98  SFPNMPIYLMIPSALIIGAGLGALAGAIPGWLRAQFGASEVIVTIMMNYILLFLGNNILQ 157

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                           V +         + +     +   +     +   +   + +T +
Sbjct: 158 NTMSKGIKESAETTKQVGANASLQMKWLTDLTQGSSISAGIFISLIMIVVVWFIMTKTTL 217

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R +  N  A      +     + A A+S    G+AG                    
Sbjct: 218 GFEIRAVGLNTDAAKYAGMSAKRNAVVAMAISGGLAGLAGTIEGLGNYLNFFTQNGSPAI 277

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
                 V L G  S   I  A AIL  +     GM           D         +   
Sbjct: 278 GFDGMAVALLGGGSYIGILGAAAILSVLKIGGLGMPMSSGVPFELVDIVTASIIFFVGAS 337

Query: 327 ALFLVILMR 335
            L  ++  R
Sbjct: 338 YLIKLMQAR 346


>gi|326315643|ref|YP_004233315.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323372479|gb|ADX44748.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 297

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 94/305 (30%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+L+        + A ++ +     G+   L +  
Sbjct: 12  LVGGLLSGVMYALVAIGFVLIYKTSGVLNFAQGAQLLLAALTF-VSLVERGMPFALALAA 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +       G+ +    L+       +A  + +     ++     +  G            
Sbjct: 71  TLAFMVLLGLAIERTVLRPLAGRSPMALFVATLGLSYVIEGVAQLAWGTQVHA------- 123

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I       + ++   F          L A +  + R T    A+R + D+  
Sbjct: 124 ----LDLGIEDTPLDIAGMLVSRFDLVAAACAGTLVALLSAFFRFTRTGLAFRAVADDTF 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +     + +A +      AG  + A               +  + +++LGG 
Sbjct: 180 AALAVGLRLPRVWAAVWAAAGVIALAAGLLWGARLGVQFSLS---LVVLKALPVLVLGGF 236

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S++       ++    +L          S ++   +              + +L+R   
Sbjct: 237 DSVAGAIVGGLLVGAFEKLAEVYLGPIVGSGIEGWFA---------YAVALVFLLVRPQG 287

Query: 339 LLRLR 343
           L   R
Sbjct: 288 LFGQR 292


>gi|257067105|ref|YP_003153361.1| Monosaccharide-transporting ATPase [Anaerococcus prevotii DSM
           20548]
 gi|256798985|gb|ACV29640.1| Monosaccharide-transporting ATPase [Anaerococcus prevotii DSM
           20548]
          Length = 314

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 100/312 (32%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  ++  + + +   A      + ++  Q++I    A G++ V+   G + L+     A
Sbjct: 17  IVALIILIVFVSVLNPAFLQVNNLLNLMRQLIINGFIALGMTFVI-LTGGIDLSVGSTLA 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + +  +  L      +I  ++    +      +   L +         I TL    IF+ 
Sbjct: 76  LTSAIFAGLLQGGMPTILAILIALGLGLILGLVNGILITKG--KLAPFIVTLATMTIFRG 133

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + +        G  +A              +FF  P   +++ I              
Sbjct: 134 LTLVYM------DGRPIAGPKDDFAFQFLGKGQFFGIPFQVILFIIA-----------YL 176

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            + + L +T+       +  N+KA F     I   K+  + +S+    ++G    +  + 
Sbjct: 177 ILWILLTKTSYGRKIYAVGGNEKASFISGIKIDKVKILVYVISALMAVLSGLVLTSRLNS 236

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+      GG  SL+       IL  +      +    F   +
Sbjct: 237 AQPTAGSAYEMDAIAAVVLGGTSMTGGSGSLTGTLIGILILGVLNNGLNLLGVSSFYQQI 296

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 297 VKGVVILIAVLI 308


>gi|218290384|ref|ZP_03494520.1| inner-membrane translocator [Alicyclobacillus acidocaldarius LAA1]
 gi|218239620|gb|EED06813.1| inner-membrane translocator [Alicyclobacillus acidocaldarius LAA1]
          Length = 401

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/353 (8%), Positives = 89/353 (25%), Gaps = 50/353 (14%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L  V+  ++  +   +  + + + ++ +Q+  Y +   G ++++  LG + L+     
Sbjct: 35  VFLSLVLIWIVFEILNNSFLTSRNLSNLVLQMAEYGLLGVGETLIL-LLGEIDLSIAAVS 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AIG     +L        ++ I   A+     G+  G      R     +          
Sbjct: 94  AIGGAVLAVLAGNGVN-PYVAILAGALSGTVLGLFQGFWVTVLRVPSFIVTLAGSLAFLG 152

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF------------ 182
            + +               + +                  + + +  +            
Sbjct: 153 LLFVLIGQEGTVPIMNNTINAIAGNYLPDWLSWVLVALAIAAMAWTTWRDRVKRQKLGLA 212

Query: 183 ------------------------------MYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                                         +    L +      +    + T+       
Sbjct: 213 LKPAASTWTKLILSAAVMIGATVLLNAYQGVPIAGLVLIIFVVLLAWVCQSTSFGRHIYA 272

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +  N +A       +   ++  F ++     + G   A+     S         +  I+ 
Sbjct: 273 VGGNAEAARRAGINVKGVRIMVFTLAGTMAAIGGIVGASRLGAASTASGGSDLLMDSIAA 332

Query: 273 VILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            ++GG        S+        ++  +      +N       L       + 
Sbjct: 333 AVIGGTSLFGGYGSVWNALLGALVIGSIENGMALLNAPTSTKYLVEGAILLLA 385


>gi|170691188|ref|ZP_02882354.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
 gi|170144437|gb|EDT12599.1| Monosaccharide-transporting ATPase [Burkholderia graminis C4D1M]
          Length = 399

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/359 (12%), Positives = 94/359 (26%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   +L  +A ++     L  GA  + + + ++  Q+ I  M A G+  V+   G + L+
Sbjct: 33  KILALLIAVAAIWIFFSVLTHGAFVTPRNLSNLLRQMSITGMLACGMVFVI-IAGEIDLS 91

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI----- 124
                 +      IL       I + +P   ++    G+  G  S   R     +     
Sbjct: 92  VGSLLGLLGGVAAILDVNRHWPIGVTLPAVMLLGVLVGLFNGWWSTYRRVPSFIVGLGGM 151

Query: 125 ------------------------------------ATLIMSEIFQNILIKWKPITNGKA 148
                                                TL +        +  +   N + 
Sbjct: 152 LAYRGILLGVTGGSTIAPVSDSFVFVGQGYLPKLAGDTLAVVLFILLAFLTIRQRRNRER 211

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                  ++     V           + +     +   +L +  L         +T    
Sbjct: 212 YQLSVVPVWQDVAKVVGAGAILAGFVATLDRYGGIPVPVLLLLALLGIFTWVATQTVFGR 271

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               +  N +A           KL+ FA+       AG    A     SP      E   
Sbjct: 272 RIYAVGSNLEATRLSGVNTNRVKLAIFALMGLMCAFAGIVNTARLAAGSPSAGSMGELDA 331

Query: 269 VISIVILG-----GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + +  I G     G  ++        ++  +      ++   +  ++       +    
Sbjct: 332 IAACFIGGTSMRGGSGTVYGALIGALVMASLDNGMSMLDVDAYWQMIVKGGILVLAVWI 390


>gi|118478300|ref|YP_895451.1| sugar ABC transporter permease [Bacillus thuringiensis str. Al
           Hakam]
 gi|196042854|ref|ZP_03110093.1| putative ribose ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|118417525|gb|ABK85944.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Bacillus thuringiensis str. Al Hakam]
 gi|196026338|gb|EDX65006.1| putative ribose ABC transporter, permease protein [Bacillus cereus
           03BB108]
          Length = 317

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 90/305 (29%), Gaps = 27/305 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L ++Y  ++ +   +      +  M    +I V+ A G S V+     + ++   + 
Sbjct: 12  IITLLLIYIAIVGMINPSFIQFNSLSLMVKSSVILVVLAIGQSFVL-FTKNIDVSVGSSM 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A    +L +             ++ +      +             +  +IM+    
Sbjct: 71  GLSAAVCGMLLTNEYS------ASLSIFAAITLGAIIGFVNGMGVAKFRVPAIIMTLGML 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+     I  G   I                     F     I  + +   +  +  + 
Sbjct: 125 GIIRGAMLIFTGGKWIEDIP---------------NDFKQLSSIIILGLPITVWFVLIIL 169

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +  +LR+      +  + DN+     +   +   K+ AF +S     +AG  F  +  
Sbjct: 170 LLLYFFLRKVPFGRYFYAVGDNEDGARLIGIPVNKVKICAFIISGISAALAGCIFVMNIG 229

Query: 255 RISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            I        E  ++ + V+      GG  SL   A     L  +      +    F + 
Sbjct: 230 FIPNQTGTGLELQVIAAAVLGGIHLKGGTGSLFGAALGALFLETISSSLVFLKIPAFWNN 289

Query: 310 LKFDC 314
                
Sbjct: 290 AISGF 294


>gi|148260600|ref|YP_001234727.1| monosaccharide-transporting ATPase [Acidiphilium cryptum JF-5]
 gi|326403795|ref|YP_004283877.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|146402281|gb|ABQ30808.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Acidiphilium cryptum JF-5]
 gi|325050657|dbj|BAJ80995.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 349

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/317 (12%), Positives = 89/317 (28%), Gaps = 23/317 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +  +L  L  +  LL             I ++ +      +  +G ++V+   G L L+ 
Sbjct: 38  WVSVLIALVAISALLSLATPYFFTEDNIIGTVAVYFSWICIAGFGEALVM-IGGGLDLSV 96

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                +      ++ +  G     L+   A  +           +   G    I TL   
Sbjct: 97  GSTMGLAGMISAMVLAAGGNLALALLAGLATGAAVGLA--NGLVITRIGLNPFITTLGSL 154

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            + + +                         T  S      F +      + +   +L M
Sbjct: 155 SVVRGLAFGIGQGM---------------AVTAPSDAAGNAFSALGTGTALGIPVPVLVM 199

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                 + + L  T        +  N++A   L   +   K+  + +S     + G    
Sbjct: 200 LGFGVIVHVVLTGTPFGRHVYGLGGNEQASRLLGLNVDRLKIRLYVISGVLAAIGGMLLT 259

Query: 251 ASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A      PD     E  ++ +++I      GG  ++  +    A+L  + +    +    
Sbjct: 260 AKSGTALPDAATGYELKVIAAVIIGGTSLAGGRGTIPGVLIGAALLGVINDGIVLLGLAG 319

Query: 306 FNSLLKFDCSFNMRHTT 322
           +   L            
Sbjct: 320 YWQQLITGLVIVAAAAI 336


>gi|227821195|ref|YP_002825165.1| putative transmembrane component of ABC transporter [Sinorhizobium
           fredii NGR234]
 gi|227340194|gb|ACP24412.1| putative transmembrane component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 326

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 96/320 (30%), Gaps = 27/320 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
              Y   +  +A+     + L      S   + ++  Q  I  + A  +S V+ S G + 
Sbjct: 25  WRDYVVYIGFVAIFIVFAILLHDRGFLSPNNLLNVLRQTAIIAIMAMAMSFVL-SAGEID 83

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+      + +    ++  +YGL          +++G C  ++          YL I + 
Sbjct: 84  LSVGAIAGLTSVVAGMVLMQYGLVF-------GIVAGLCLGLVVGAFNGALTAYLNIPSF 136

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           +++     I        +G + + V D  +                         +  ++
Sbjct: 137 LVTLGMMGIARGVGMWVSGTSPVPVIDDTFTYAF--------------GSGNIGPIPVLV 182

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +  L     L +R+T           N  A       +   K     ++     +AG 
Sbjct: 183 IWVVVLGTVAHLAIRKTPFGRKVMAAGGNPVAALYSGVNVRRVKFQVLMITGVAAAIAGM 242

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
            +A         + +  E  ++ ++V     + GG  ++        ++  +        
Sbjct: 243 LYAGRLQSGRFQLGEGDELSVIAAVVLGGTSLFGGRGTVVGSIVGALLIGIINNGLILGG 302

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
             Y   L+       +    
Sbjct: 303 LEYSQQLIARGMLIILAVAI 322


>gi|170749722|ref|YP_001755982.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
 gi|170656244|gb|ACB25299.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
          Length = 290

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 84/306 (27%), Gaps = 30/306 (9%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            ++  +G      V+ A GL++V G +G+++L        GAY               ++
Sbjct: 9   TFLYQIGDAFSFLVLSACGLAVVFGMMGVINLAHGELIMCGAYVTAATTRAGLPLPLGIL 68

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             +        ++  L      G  L                                 +
Sbjct: 69  AGALAAGAVGMVMERLVIRHLYGRPLD---------------TIVATWGISLAATQGTLI 113

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
               +          F      Y  +   +++    + A + +    T      R     
Sbjct: 114 LLGSSMPGIGTPLGSFTVGGYSYSTYRVVLMVAAVAVLAGLYIAFNATRFGTLARATIQV 173

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
                +L           F + +A  G+AG  +A +   +      F   +     V++G
Sbjct: 174 PHMAEALGVDTRTVYALTFGLGAALAGLAGGLYAPTMTIVPTMGTTFI--MEAFVTVVVG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G       A A  +L  V  L        F  +              +++A+ LVI +  
Sbjct: 232 GADIFLGTAPAALVLGTVRALLTTWQGQLFGQIG-------------LLVAVILVIRVLP 278

Query: 337 HSLLRL 342
             +  L
Sbjct: 279 RGISGL 284


>gi|29833959|ref|NP_828593.1| ABC transporter permease [Streptomyces avermitilis MA-4680]
 gi|29611084|dbj|BAC75128.1| putative simple sugar ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
          Length = 346

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 103/324 (31%), Gaps = 26/324 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   IL +  V+  L          S++ I  + +   I V+ A G S+VV     + L+
Sbjct: 30  RELAILAVFLVMIAL-TQAGNSEFLSEQGIKDLLLNATILVLVATGQSLVV-ITRNVDLS 87

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 I A++      + G +  + I ++ ++    G++ GL     +   L +    +
Sbjct: 88  VGSTLGISAFAAGTY-LQGGGNPVVAIVLAVLLGVGFGLLNGLLVSLGQVPALVVTLGTL 146

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                               I   D ++     + +      F          + ++ L 
Sbjct: 147 YI------------------IRGIDSIWVGSRQITAADLPGGFVDFGSGGISAVPWLALI 188

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              +  +   +L+          +  N +A       +    L+A+       G+AGA +
Sbjct: 189 ALAVLIATAYYLKHFGSGRELYALGSNPEAARLAGMPVRKRILAAYTFCGGLAGLAGALY 248

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            A    +        E  +V ++V+      GG  S+   A    +L  V  +   +   
Sbjct: 249 LARFGNVDSGTGNGYELTVVSAVVVGGIVFTGGSGSVYGAALGALLLTSVNSVLPALGVS 308

Query: 305 YFNSLLKFDCSFNMRHTTLMVIAL 328
               L        +      ++AL
Sbjct: 309 SVWVLAINGILLILAIAVDRIVAL 332


>gi|295109314|emb|CBL23267.1| monosaccharide ABC transporter membrane protein, CUT2 family (TC
           3.A.1.2.-) [Ruminococcus obeum A2-162]
          Length = 331

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 104/322 (32%), Gaps = 23/322 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
            + +L ++ +V  +++     +  + K +  M     + ++ + G+ + V  +G + ++ 
Sbjct: 14  REALLAIVLIVLFVIITAINPSFLTPKSLMDMLKNNAVTMVMSLGM-LCVMLVGGIDISI 72

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           +   A+   S  +L     +S   L  V A+  G     +    +        IAT+   
Sbjct: 73  MSTLALSGMSIGMLLKYEHISSTFLAFVIAIAIGIVCGAVVGLIISRADVPPIIATMGFM 132

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            I++ +  +        +   + +   F  T    L                   V+  +
Sbjct: 133 YIYRALGYQVSHGGEWASAAALGEFKNFATTKFLGLNC-----------------VIWVI 175

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                    +++ T        +  N  A       +   KL  + +     G+ GA   
Sbjct: 176 IVCYVFFFWFMKWTRTGRMIYAVGSNPSAAEVSGINVKNIKLLVYTIMGLLAGLGGALQV 235

Query: 251 ASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           +      PDM    E  ++ + VI      GG  ++      + IL  + +    + F+ 
Sbjct: 236 SVYASAMPDMQYGGEMDVIAACVIGGVSMNGGRGTVVGALLGSLILATIAKALPLIPFFN 295

Query: 306 FNSLLKFDCSFNMRHTTLMVIA 327
              L        +    + VI 
Sbjct: 296 QLWLNTIKGVIILVVVVMNVIL 317


>gi|91777570|ref|YP_552778.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|296162848|ref|ZP_06845629.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|91690230|gb|ABE33428.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Burkholderia xenovorans LB400]
 gi|295886885|gb|EFG66722.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 286

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 52/304 (17%), Positives = 110/304 (36%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++Y + A GLSIV G L  ++      Y +GAY       ++ +S W  + V
Sbjct: 8   IVNGIGVGMLYFLLAVGLSIVFGLLRFVNFAHGAFYLLGAYFCY-QAMQWSMSFWTALVV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ GA   ++    L+          ++++     ++ +   +  G  G  VA     
Sbjct: 67  VPIVVGALAWVVEKLILRHVYAQQHEFHILVTVGLALVVQECAILIWGPLGDNVAVPDML 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  +              +Y  +  +V+     L+A +   L  T + +A R   ++ +
Sbjct: 127 NGVVI----------WGSFVYPKYRLFVIGFTAVLAALLWWVLEGTRLGSAVRAGSESTE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   ++      FA+ +A   +AG   A  R              +   +V++GGM
Sbjct: 177 MVSLLGINVLRVFSLVFALGAATAALAGVLAAPIRGV--DPFMGIEALSVAFVVVVVGGM 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +         ++  V  +   +              +      ++ +A+  V+L+R + 
Sbjct: 235 GNFLGALVGGLLVGIVQSVMSTL--------------WPEGARLMIYVAMAAVLLLRPNG 280

Query: 339 LLRL 342
           LL  
Sbjct: 281 LLGR 284


>gi|52142547|ref|YP_084282.1| sugar ABC transporter, permease [Bacillus cereus E33L]
 gi|51976016|gb|AAU17566.1| sugar ABC transporter, permease [Bacillus cereus E33L]
          Length = 317

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 90/305 (29%), Gaps = 27/305 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L ++Y  ++ +   +      +  M    +I V+ A G S V+     + ++   + 
Sbjct: 12  IITLLLIYIAIVGMINPSFIQFNSLSLMVKSSVILVVLAIGQSFVL-FTKNIDVSVGSSM 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A    +L +             ++ +      +             +  +IM+    
Sbjct: 71  GLSAAVCGMLLTNEYS------ASLSIFAAITLGAIIGFVNGMGVAKFRVPAIIMTLGML 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+     I  G   I                     F     I  + +   +  +  + 
Sbjct: 125 GIIRGAMLIFTGGKWIEDIP---------------NDFKQLSSIVILGLPITVWFVLIIL 169

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +  +LR+      +  + DN+     +   +   K+ AF +S     +AG  F  +  
Sbjct: 170 LLLYFFLRKVPFGRYFYAVGDNEDGARLIGIPVNKVKICAFMISGISAALAGCIFVMNIG 229

Query: 255 RISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            I        E  ++ + V+      GG  SL   A     L  +      +    F + 
Sbjct: 230 FIPNQTGTGLELQVIAAAVLGGIHLKGGTGSLFGAALGAFFLETISSSLVFLKIPAFWNN 289

Query: 310 LKFDC 314
                
Sbjct: 290 AISGF 294


>gi|308176520|ref|YP_003915926.1| sugar ABC transporter inner membrane subunit [Arthrobacter
           arilaitensis Re117]
 gi|307743983|emb|CBT74955.1| putative sugar ABC transporter, inner membrane subunit
           [Arthrobacter arilaitensis Re117]
          Length = 423

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/321 (13%), Positives = 91/321 (28%), Gaps = 15/321 (4%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGS--------LGLLSL 68
           ++AV   L +  FL    S   I+S+ +  L+       + +V GS         G++++
Sbjct: 94  MVAVAAVLFVLGFLIWVVSGANINSISLASLLAGGVVLAVPLVFGSLSGVLCERAGVVNI 153

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                   GA++  ++ S    +   LI      +    ++            +    L 
Sbjct: 154 AIEGQLLGGAFTAALVASLTKNAFAGLIAAGLAGALVSLVLAIFSIKYLVNQIIVGVVLN 213

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +        +    +            L  +   + S I              ++ Y+ +
Sbjct: 214 VLVSGITGFLFTTVMQEDPERFNSPAHLPVIDIPLLSSIPVIGPILFKQSVIGYLMYLAV 273

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            + +          +T      R + ++ KA  +L   +   +     +     G+ G+F
Sbjct: 274 FLVWFGLF------KTKWGLRVRAVGEHPKAADTLGIKVNSIRFWNVTLGGIVAGIGGSF 327

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           F                  I ++ VI  G  +      A  +      L   +       
Sbjct: 328 FTLVAIDSFTKEISGGRGFIALAAVIF-GRWNPIGAFLAALLFGFADNLQVILTIIGTPV 386

Query: 309 LLKFDCSFNMRHTTLMVIALF 329
             +F        T   V  L 
Sbjct: 387 PSQFMAMMPYLVTIFAVAGLV 407


>gi|190333357|gb|ACE73670.1| l-arabinose membrane permease [Geobacillus stearothermophilus]
          Length = 407

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/350 (11%), Positives = 98/350 (28%), Gaps = 55/350 (15%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  L ++  L   L  G       I ++ +Q    ++ A G+ +V+   G + L+
Sbjct: 33  RSYSMVIALILIMLLFQVLTGGILLRPLNITNLILQNSYILVLAVGMMLVI-ITGHIDLS 91

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD--------- 120
                A       IL  ++  S+WL + +  ++    G   G      +           
Sbjct: 92  VGSVAAFVGALAGILMVQHHASVWLTVLICLLLGALIGAWQGFWVAYVKIPSFIVTLAGM 151

Query: 121 ----------------------------------------YLAIATLIMSEIFQNILIKW 140
                                                   +L    +  +     ++++W
Sbjct: 152 LLFRGLTMVILEGQSIAPFPKTFQNMSSGFLPDVFHGGEIHLFTIVIGFAASLLFVVLEW 211

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           +   + K   +           +  +       +  +     +  +L+ +  L  +    
Sbjct: 212 RKRNSQKKYGFAVTPAAMFALKLAVIAAVIMIFTYILATYEGIPTILVILVALIIAYSFV 271

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             RT +      I  N+KA               F        ++G  FAA  +  +P  
Sbjct: 272 ANRTVVGRHIYAIGGNEKAAQLSGIKTKRVTFWVFVNMGVLAALSGLIFAARLNAATPKA 331

Query: 261 FKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
               E   + +  I      GG+ ++S       ++  +      +    
Sbjct: 332 GNLFELDAIAACFIGGASAYGGIGTISGAIIGGLVMGVMNNGMSLLGLGI 381


>gi|83717568|ref|YP_438412.1| ribose ABC transporter permease [Burkholderia thailandensis E264]
 gi|167614864|ref|ZP_02383499.1| ABC transporter permease protein [Burkholderia thailandensis Bt4]
 gi|83651393|gb|ABC35457.1| ribose ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 339

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 92/311 (29%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 40  VLVLLCVGFAFMTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 98

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A    +L S      WL IP +  +    G++ G      R     +    ++ +     
Sbjct: 99  A-VASLLASNIPGWGWLGIPAALAVGLVFGVVNGGLISLLRLPPFIVTLGALTAVRGIAR 157

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    +G           F        + + ++++    + A  
Sbjct: 158 L--------------------MGNDTTIFNPQLPFAFIGNGSILGVPWLVVIALAVVAIS 197

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   +L  +A S    G+     AA     +
Sbjct: 198 WFILRRTVLGMRIYSVGGNPEAARLSGINVRGIELFVYATSGLLAGLGALMSAARLYAAN 257

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 258 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLSNGLVLLGVSDIWQYII 317

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 318 KGLVIIGAVAL 328


>gi|325977339|ref|YP_004287055.1| ABC transporter substrate binding/membrane-spanning protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|325177267|emb|CBZ47311.1| ABC superfamily ATP binding cassette transporter substrate
           binding/membrane-spanning protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 650

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 99/305 (32%), Gaps = 33/305 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S   Q L++ + A G+ I    L +  L+   ++ +GA S  I+     ++  +    
Sbjct: 354 VLSAISQGLLWSIMAIGVFITFRILDIADLSAEGSFPLGAASTAIMIVNG-INPLIATIG 412

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +     G + G    K +   L    + ++ ++   L+         AG      L  
Sbjct: 413 GFLAGMIAGAVSGFMHTKMKIPALLTGIITLTALYSINLLVLGSANVSLAGQETLVTLMT 472

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +                   +  + +    L   +++ L  T +  A R   DN  
Sbjct: 473 SALNLSK--------------LYAVILIGVIFVALVIILLVVLLNTQVGLALRATGDNIA 518

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +    +   K+  + +S+  I +AG+  A +      +M   +         I+ G+
Sbjct: 519 MGEANGIKVDRMKILGYMISNGLIALAGSLLAQNNGYADMNMGTGT---------IVNGL 569

Query: 279 TSLSKIAKATAILIGVV------ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
            S+     A  I+  +        +  G   Y    ++    + + +   L    L  +I
Sbjct: 570 ASI---ILAEVIVKYLPLGKRLWSIVLGSILYRLVLVIILAMNVDAQMLKLASAILLALI 626

Query: 333 LMRSH 337
           L    
Sbjct: 627 LYVPE 631


>gi|227833901|ref|YP_002835608.1| putative ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262184904|ref|ZP_06044325.1| putative ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454917|gb|ACP33670.1| putative ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 352

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 101/295 (34%), Gaps = 13/295 (4%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F+  + + +    L AVV  +L  +   A +S +   ++        + A  + +++   
Sbjct: 26  FARLIRRPELASLLGAVVIFVLFMIVAPAFRSVEAFSTVLYASSTLGIVALAVGLLM-IG 84

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
               L+  +A    A    +L   + L+ W+ + +S + + A G + G   ++ + D   
Sbjct: 85  NEFDLSSGVAVTSAALVATMLNYNFHLNSWVGVGLSLITALAIGALNGFLVVRTKIDSF- 143

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           + TL    + Q + +    +  G+        +   G+            S  +   +  
Sbjct: 144 LITLAAFLMLQGLNLAITKLVTGQVATPTIADMEGFGSARVIFAGTIHIGSLSIRATVIW 203

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           + + + +            +T   N    +  + +A  ++   +   K++ F +      
Sbjct: 204 WILFVAIASWVLY------KTRWGNWIFAVGGDDEAARAVGVPVRRVKVALFMLVGFAAW 257

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIG 293
             G     + D I       +E + +I+ VI      GG  +    A    I   
Sbjct: 258 FVGMHTLFAFDSIQAGQGIGNEFLYIIAAVIGGCSMTGGRGTAVGTAIGALIFGM 312


>gi|226308760|ref|YP_002768720.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|229488338|ref|ZP_04382204.1| ABC transporter, carbohydrate uptake transporter-2 family, permease
           protein [Rhodococcus erythropolis SK121]
 gi|226187877|dbj|BAH35981.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
 gi|229323842|gb|EEN89597.1| ABC transporter, carbohydrate uptake transporter-2 family, permease
           protein [Rhodococcus erythropolis SK121]
          Length = 347

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/320 (12%), Positives = 94/320 (29%), Gaps = 26/320 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           +NK    +  + V    +      +  +   + ++  QI   ++ A  ++ V+ + G + 
Sbjct: 25  VNKPTLAMLAVTVAVAAVFSATTSSFLTFTNLSNLATQIAPVLIIAVAMTFVI-TAGQID 83

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A  A     L      S  + +    M +    +   L + +  G    I TL
Sbjct: 84  LSVGAIVAFVAAMSAELIQAGVDSSLVFVAAPVMGAAWGLVNGWLAAYQ--GIPPFIVTL 141

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               + + I +                R       V +   F +  ++  +      ++ 
Sbjct: 142 ATMSVIRGIALY---------------RTEGFSVPVPADTYFAKLGTAEFLGFSASAWIA 186

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L +  + A  +    R         I  N ++            +     +    G+AG 
Sbjct: 187 LVVVVIGAIAL---NRMRFGRYVTGIGSNVESVRRSGVNTRRVLMMTLVFTGLAAGIAGL 243

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
             AA     S +     E  ++ ++V     + GG  ++        +   +      + 
Sbjct: 244 LIAARLGSGSANSATGFELTVITAVVLGGTNLFGGRGTVIGTVIGAVLTGIIANGLTLLG 303

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F + +       +    
Sbjct: 304 VSPFLTPIITGVVLLLAIWI 323


>gi|197295081|ref|YP_002153622.1| inner membrane ABC transporter permease protein YjfF [Burkholderia
           cenocepacia J2315]
 gi|195944560|emb|CAR57164.1| putative transport system component [Burkholderia cenocepacia
           J2315]
          Length = 362

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 91/309 (29%), Gaps = 27/309 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILI----YVMFAWGL 56
           M+ F  RL     +  ++ +V  + LF F     +  +   +   +L+     ++ A G+
Sbjct: 1   MTRFLGRLADPRTLPIVVTIVLFVALFGFGSVMYTGFFSMQVLTGLLVDNAFLLIVAIGM 60

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
           + V+   G + L+     A+      +   R    +W+++P+        G  MG     
Sbjct: 61  TFVI-VSGGIDLSVGSVVALTTIFCAVGAERLHWPVWVIVPLVLAFGALYGAAMGALIHY 119

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
           FR     +    M        +                 +     T+           S 
Sbjct: 120 FRLQPFIVTLAGMFLARGACFL-----------------ITTQSITINQPAFHAIAGISV 162

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
            +    +    L      A  I     T        +  N+++   +   +   K+  +A
Sbjct: 163 PVGGGTLSAGALIALATLAVAIYVAHFTRFGRNVYAVGGNERSALLMGLPVARTKIGVYA 222

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAIL 291
           +S     + G  F            +  E   + + VI      GG+  +        IL
Sbjct: 223 LSGFCSALGGVVFTLYVLSGYGLQAQGMELDAIAATVIGGTLLTGGVGYVIGSVFGVGIL 282

Query: 292 IGVVELCCG 300
             +  L   
Sbjct: 283 GTIQVLITF 291


>gi|328886170|emb|CCA59409.1| Inositol transport system permease protein [Streptomyces venezuelae
           ATCC 10712]
          Length = 350

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 84/267 (31%), Gaps = 13/267 (4%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
           +      + ++        + A  +++++   G   L+  +     A    +   +   +
Sbjct: 51  SFLKPSSLGTVLYAASTIGIMAVPVALLM-IGGEFDLSAGVLVTSSALVSSMFSYQMTAN 109

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
           +W+ + VS +++ A G+  G    + +     I  L    +   + +    + +G     
Sbjct: 110 VWVGVGVSLLVTLAIGVFNGFMLTRTKLPSFIIT-LGTFLMLTGLNLGLTKLISGTVSTK 168

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
               +    +          F S   I  +     +L    L A     L RT   N   
Sbjct: 169 TIADMEGFSSAR------KLFASQLTIGGVEFKVTILWWLGLVALATWILLRTRFGNWIF 222

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +     A  ++   +   K+  +   +    ++G     S D +       +E I +I+
Sbjct: 223 AVGGGADAARAVGVPVYRTKIGLYMGVAFCAWISGQHLLLSFDVVQSGEGVGNELIYIIA 282

Query: 272 IV-----ILGGMTSLSKIAKATAILIG 293
            V     I GG  S    A    I   
Sbjct: 283 AVIGGCLITGGYGSAIGSAVGALIFGM 309


>gi|153809652|ref|ZP_01962320.1| hypothetical protein RUMOBE_00033 [Ruminococcus obeum ATCC 29174]
 gi|149833830|gb|EDM88910.1| hypothetical protein RUMOBE_00033 [Ruminococcus obeum ATCC 29174]
          Length = 331

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 104/322 (32%), Gaps = 23/322 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
            + +L ++ +V  +++     +  + K +  M     + ++ + G+ + V  +G + ++ 
Sbjct: 14  REALLAVVLIVLFVIITAINPSFLTPKSLMDMLKNNAVTMVMSLGM-LCVMLVGGIDISI 72

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           +   A+   S  +L     +S   L  V A+  G     +    +        IAT+   
Sbjct: 73  MSTLALSGMSIGMLLKYEHISSTFLAFVIAIAIGIVCGAVVGLIISRADVPPIIATMGFM 132

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            I++ +  +                    G    S      F +      + +  V+  +
Sbjct: 133 YIYRALGYQVSH-----------------GGEWASAAALGNFKNFATTKFLGLNAVIWVI 175

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
                    +++ T        +  N  A       +   KL  + +     G+ GA   
Sbjct: 176 IVCYVFFFWFMKWTRTGRMIYAVGSNPSAAEVSGINVKNIKLLVYTIMGLLAGLGGALQV 235

Query: 251 ASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           +      PDM    E  ++ + VI      GG  ++      + IL  + +    + F+ 
Sbjct: 236 SVYASAMPDMQYGGEMDVIAACVIGGVSMNGGRGTVIGALLGSLILATIAKALPLIPFFN 295

Query: 306 FNSLLKFDCSFNMRHTTLMVIA 327
              L        +    + VI 
Sbjct: 296 QLWLNTIKGIIILVVVVMNVIL 317


>gi|150396002|ref|YP_001326469.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
 gi|150027517|gb|ABR59634.1| inner-membrane translocator [Sinorhizobium medicae WSM419]
          Length = 298

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 88/275 (32%), Gaps = 2/275 (0%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
             +Y   A+G +I         L     +A     +V+        +WL++P +  +  A
Sbjct: 15  AALYAALAFGYAIAFAVTRRADLTYGALFAFAGQMFVLFADVGWNRLWLVLPAALGLGAA 74

Query: 106 CGMIMGLPSLKFRGDYLA-IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
             +  G+ +    G Y+        +       +    +    A +    R  +L   + 
Sbjct: 75  AALTFGIGAGLIAGRYIMRPLAFSSANAVVVASLGCLLVLMETARLASETRSLWLPPFLN 134

Query: 165 SLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLN 224
            ++ F+  P+  V   +        M  L A     L  +     WR + ++++A     
Sbjct: 135 GVVVFWPNPAFPVALTVVQLVNTALMVTLVAGGHWLLTHSYAGRYWRAVSEDREAAALCG 194

Query: 225 TTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKI 284
                  ++A+ V+S      G   A+    +       +  + V+ I  +GG T+    
Sbjct: 195 VDPGSVYIAAYGVASLIAAFCGILAASYYGNMDF-GTGLTFGVKVLFIAAIGGQTAPLFA 253

Query: 285 AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           A   A +  +  L        +     F     + 
Sbjct: 254 ALGAAGIGLIETLWSAYGPILWRDFAIFGFLVVVL 288


>gi|229059633|ref|ZP_04197011.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus AH603]
 gi|228719646|gb|EEL71245.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus AH603]
          Length = 286

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 102/305 (33%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V + +  G  +  LI  
Sbjct: 8   FVNGISTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWIFNTTGSYLLALIGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 68  IAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKVFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L     +    VI   +  +V+L    +  +++L L++T I    R    +++
Sbjct: 116 PIGAKLPLWLQGSYTFEGVILIKYRLFVILVGILIYIALLLLLKKTKIGLMIRAGVMDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++   
Sbjct: 235 GSVQGSALASLIVGLAGAFTAYF--------------IPDLSLAINMLMLLFFLIVKPTG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|222082219|ref|YP_002541584.1| urea or short-chain amide ABC transporter [Agrobacterium
           radiobacter K84]
 gi|221726898|gb|ACM29987.1| urea or short-chain amide ABC transporter [Agrobacterium
           radiobacter K84]
          Length = 292

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/289 (12%), Positives = 84/289 (29%), Gaps = 12/289 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      IY + A G +++  +   ++        + A+  +     +GLS  + I V
Sbjct: 8   LVSGLATGSIYALAAIGFTLLWQASQTINFAQGEFIMLPAFFVLAATHVFGLSFPIAIVV 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  ++           +        +  ++++ I   IL+K        A       L+ 
Sbjct: 68  ALALTLLLLGFGFKRIVVDPLLSHGVLPIVIATIALGILMKEGVKQFYSAEAQPFPALFP 127

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             T                   +    VL+        +  ++  T    A +    N +
Sbjct: 128 DTT----------LNVFGAAVSVQDIAVLVIALGAVLLLQFFMNGTKTGRAMQATAQNPQ 177

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   I    L  F +++A   +A    +     ++      +  +I     I+GG 
Sbjct: 178 VAEILGVPIKRMILYTFLINAALALLASILISP--IYLAKFSNGETLGLIAFIAAIVGGF 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
             +        ++  +  L        + S +       +       + 
Sbjct: 236 NQIKGAIAGGLLIGVIDNLSAAYVSASYRSAIPLILLIVIILVRPQGLL 284


>gi|320094480|ref|ZP_08026256.1| inner-membrane translocator [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319978589|gb|EFW10156.1| inner-membrane translocator [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 424

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/318 (12%), Positives = 98/318 (30%), Gaps = 10/318 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYV--MFAWGLSIVVGSLGLLSLNCVI 72
               A V   L+F   G+  +     ++   + I    +F     +V   +G++++    
Sbjct: 99  AAGAATVLGFLVFAGSGSNGAVTLTSTLVSTVAISTPLIFGALSGVVSEHVGVVNIAIEG 158

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
              +GA++ V+  S +        P + +++      +    L        +  +I+  +
Sbjct: 159 DLLVGAFAGVMAASFFRT------PYAGVVAAPIAGALLGSLLALFSVKYGVDQIIVGVV 212

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF-MYYVLLGMC 191
              + +       G         L      + ++          +    F    ++  M 
Sbjct: 213 LNVLALGLTTFFYGTLMKDAPQDLNTNQFALSAVKIPLLAEIPIIGPVFFNQTILVYLMY 272

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
               ++ ++L R+      R   ++ +A  ++   +   + +   + SAF G+ GAFF  
Sbjct: 273 AAVVALTVFLYRSRWGLRLRACGEHPRAADTVGINVNRTRATNAILGSAFAGLGGAFFTL 332

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                  D        I ++ +IL G         A  +      +   +     +    
Sbjct: 333 GSGLSFTDNISAGNGYIALAAMIL-GKWHPLGAMGAAIMFGFAQAVARLLPNIEPSIPSD 391

Query: 312 FDCSFNMRHTTLMVIALF 329
                    T + V    
Sbjct: 392 LVSMIPYVVTIIAVAGFV 409


>gi|315081481|gb|EFT53457.1| putative ribose ABC transporter permease protein [Propionibacterium
           acnes HL078PA1]
          Length = 329

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 98/310 (31%), Gaps = 28/310 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +   I ++GIQ  +  + A+G++ V+ + G + L+     
Sbjct: 35  ALVGLIILCIALFIATPVFLTVPNIINIGIQAAVVAIMAFGMTFVIVTSG-IDLSVGSVA 93

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A     + S  GL  WL + +  +I    G + GL     +                
Sbjct: 94  ALSAMVSAWMFSNAGLPGWLTLIIGLLIGLLAGAVSGLAIAYGKLPAFI----------- 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  + +      +        +   ++ +    
Sbjct: 143 -----------ATLAMMSVARGLTLVISGGTPVATSDAVNQLGADVGPIPVPVIMLALAG 191

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT +  +   I  N++A       +    ++ +A++  F G+AG   A    
Sbjct: 192 VVCWFMLSRTVLGRSLYAIGGNEEAARLSGIPVRRILVTVYALAGVFAGLAGLVLAGRLS 251

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLS-----KIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++VI G   S              +L  +      +N   F   
Sbjct: 252 SAQPQAGFGYELDAIAAVVIGGASLSGGSGKASGTFIGAVLLAVIRNGLNILNVTSFWQQ 311

Query: 310 LKFDCSFNMR 319
           +   C   + 
Sbjct: 312 VVIGCVIALA 321


>gi|304391520|ref|ZP_07373462.1| inner-membrane translocator [Ahrensia sp. R2A130]
 gi|303295749|gb|EFL90107.1| inner-membrane translocator [Ahrensia sp. R2A130]
          Length = 343

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 48/343 (13%), Positives = 103/343 (30%), Gaps = 52/343 (15%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS------------------ 80
           + +   +   Y + A GL+++ G+LG+++      + IGA+                   
Sbjct: 8   VLNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFCAVTLSKLLTVSHIVIDET 67

Query: 81  ---------------------YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
                                          ++ + I V+  +  A G+ M    +K   
Sbjct: 68  KTDFLGNPAKVEVPYLYDVFGQATGDVIIDWAVPISILVAIPVMMAIGVAMERGLIKHFY 127

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
                  ++++     +L +      G   I       F G+          F  + VIY
Sbjct: 128 KRPHADQILVTFGLAIVLQEIIKYFYGANPIPTPAPEVFAGSFDFGT--LLGFDPNLVIY 185

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
             +          +   +  +L+ T      R    +++    L   I       F +++
Sbjct: 186 PYWRLVYFAFAAVVIGGVFSFLQFTTFGMVVRAGMQDRETVGLLGINIDKRFTIMFGLAA 245

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  G+AG  +             F     V+ +V    M SL     A  +L  +     
Sbjct: 246 AVAGIAGVMYTPINSPNYHMGMDFLVLSFVVVVVGG--MGSLGGAVLAGFLLGILES--- 300

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 F S+ +        +  ++ +   +++L R   L+  
Sbjct: 301 ------FASMGQVLEVLPGINQVILYVVAIVILLTRPRGLMGR 337


>gi|323529357|ref|YP_004231509.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
 gi|323386359|gb|ADX58449.1| inner-membrane translocator [Burkholderia sp. CCGE1001]
          Length = 399

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/359 (12%), Positives = 91/359 (25%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   +L  +A ++     L  GA  + + + ++  Q+ I  M A G+  V+   G + L+
Sbjct: 33  KILALLIAVAAIWIFFSLLTHGAFVTPRNLSNLLRQMSITGMLACGMVFVI-IAGEIDLS 91

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +      IL       I + +PV  ++    G+  G  S   R     +    M
Sbjct: 92  VGSLLGLLGGVAAILDVNRHWPIGVTLPVVMLLGVLIGLFNGWWSTYRRVPSFIVGLGGM 151

Query: 130 SEIFQNILIKWKPITNGKAGIYVAD----------------------------------- 154
                 +L      T                                             
Sbjct: 152 LAYRGILLGVTGGSTIAPVSDSFVFVGQGYLPKLAGDTLAVVLFLLLAFLTIRQRRNRER 211

Query: 155 ------RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                  ++     V           + +     +   +L +  L         +T    
Sbjct: 212 YQLSVVPIWQDVAKVVGAGAILAGFVATLDRYGGIPVPVLLLLALLGIFTWIATQTVFGR 271

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               +  N +A           KL  FA+       AG    A     SP      E   
Sbjct: 272 RIYAVGSNLEATRLSGVNTDRVKLVIFALMGLMCAFAGIVNTARLAAGSPSAGSMGELDA 331

Query: 269 VISIVILG-----GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + +  I G     G  ++        ++  +      ++   +  ++       +    
Sbjct: 332 IAACFIGGTSMRGGSGTVYGALIGALVMASLDNGMSMLDVDAYWQMIVKGGILVLAVWI 390


>gi|262041434|ref|ZP_06014637.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259041228|gb|EEW42296.1| sugar ABC superfamily ATP binding cassette transporter, membrane
           protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 343

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 97/326 (29%), Gaps = 25/326 (7%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFL-----GATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           ++ K   I  ++ V+                  +   +  + +Q+ I  + A G++ V+ 
Sbjct: 24  KMPKDTGIFVVMLVIALTFEIAGWYVRDQSFLLNTNRLVLIVLQVAIIGIIAVGVTQVII 83

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           + G + L+              + +   +    L   S  +S     ++ LP++      
Sbjct: 84  TTG-IDLSSG-----------SVIALAAVVAASLAQTSDSLSPMFPALVNLPAVIPICAG 131

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           + +  L        +     P      G+ V+ R      T  + I F     + +    
Sbjct: 132 IGVGLLCGLTNGFLVTRTGIPPFIATLGMMVSARGLAQYYTQGNPISFLSDSFTAIGQGA 191

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
               +   +    A   + L+ T        I  N  +       +    +  + ++ A 
Sbjct: 192 MPVIIFFVIA---AVFHIALKHTRYGKYVYAIGGNMTSAKVSGINVNKYLVIVYTIAGAL 248

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+AG   AA        M    E   + + VI     +GG+  ++       IL  +  
Sbjct: 249 SGLAGVVLAARVSSGQSSMGMSYELDAIAAAVIGGSSLMGGVGGITGTLIGAMILGLIKS 308

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
               +    +   +          T 
Sbjct: 309 GFTFVGVDAYVQDIIKGIIIVAAVTI 334


>gi|260467511|ref|ZP_05813679.1| hypothetical protein MesopDRAFT_6326 [Mesorhizobium opportunistum
           WSM2075]
 gi|259028738|gb|EEW30046.1| hypothetical protein MesopDRAFT_6326 [Mesorhizobium opportunistum
           WSM2075]
          Length = 122

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 31/83 (37%)

Query: 17  LLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI 76
            +  V   +L   L       Y   + I   IY + A    + +G  G+ +   +  + I
Sbjct: 30  AVGFVLGFVLLALLPLVFGDTYARHILIMAFIYAIVASNWDLSLGYGGVFNFGHLALFGI 89

Query: 77  GAYSYVILGSRYGLSIWLLIPVS 99
           G Y+Y +L        W+ +  +
Sbjct: 90  GVYAYSLLTKLSAFDPWIALLPA 112


>gi|170750812|ref|YP_001757072.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
 gi|170657334|gb|ACB26389.1| inner-membrane translocator [Methylobacterium radiotolerans JCM
           2831]
          Length = 277

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 62/234 (26%), Gaps = 14/234 (5%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
             +     I  + + GL  + G L +++        +GAY  V+           L    
Sbjct: 5   LDILTTAAILFIVSIGLLAIFGVLKIINFAHGAWLTVGAYCAVVTAKLGLNPWAALPLAF 64

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           A+ +   G+             L                       G     +    +  
Sbjct: 65  AVGAALGGLAEHFIIRPLYRRPLDAI--------------LATWGLGIVVGQLITLAFGR 110

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              +   +         V Y  +    L     +     L + RT +  + R +  N+  
Sbjct: 111 DVQLTPNLYAGTVEILGVDYSAYRLVALGIALAIGTLFALTIERTRLGLSARAVIMNETL 170

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             SL       +L  F + + F G+AG                +     ++ +V
Sbjct: 171 ARSLGIDTGRVRLVVFMLGAGFAGLAGVLLTPLTSVDPNMGVSWLIGAFMLVMV 224


>gi|75908392|ref|YP_322688.1| inner-membrane translocator [Anabaena variabilis ATCC 29413]
 gi|75702117|gb|ABA21793.1| inner-membrane translocator [Anabaena variabilis ATCC 29413]
          Length = 332

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 97/315 (30%), Gaps = 24/315 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + V+  +L  L      +     ++  Q  I ++ A G++ V+   G + L+     
Sbjct: 33  ILPILVIICILFSLLSPNFPTAGNAVNILRQASINIVLATGMTFVI-LTGGIDLSVGSIL 91

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A   V++     L    +            +   L +      ++     + +    
Sbjct: 92  AVSAVVTVLVSLLPALGWAAVPVGLLTGLLLGLLNGALITFLDVPPFIVTLGSLTALRGA 151

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             LI                           + R   F      Y  F+ ++++      
Sbjct: 152 AFLIANG---------------------TTVINRNINFAWIGNSYVGFLPWLVIIALLTV 190

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     LR+T +      +  N++A       +    L  + VS    G+AG   A+   
Sbjct: 191 AVSWFVLRQTVLGVQIYAVGGNERAARLTGIKVNRVLLFVYGVSGLLAGLAGIMSASRLY 250

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             +  M      +  I+ VILGG TS +         +    +   +N       + F  
Sbjct: 251 SAT-GMLGQGYELDAIAAVILGG-TSFTGGIGTIGGTLLGALIIAVLNNGLTLLNMSFFW 308

Query: 315 SFNMRHTTLMVIALF 329
              ++   ++   + 
Sbjct: 309 QLVVKGLVIIAAVMI 323


>gi|46201434|ref|ZP_00208101.1| COG0559: Branched-chain amino acid ABC-type transport system,
           permease components [Magnetospirillum magnetotacticum
           MS-1]
          Length = 286

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 97/302 (32%), Gaps = 26/302 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL+++ G +G+++L     Y +GAY             WL    
Sbjct: 10  VLNGVQYGLLLFLVASGLTLIFGIMGIINLAHGAFYMLGAYLAY----------WLARTT 59

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            ++ +     +    ++ +  + L + TL   +    +L+ +  I        +      
Sbjct: 60  GSLTAAVVLSLPISAAIGYVIEALLVRTLYRRDHLDQVLLTYGLILIFNEATRMIWGADV 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G TV + + +    +  + Y ++   +      L+ ++ L + RT      R    N+ 
Sbjct: 120 HGVTVPAALNWSIRLTDTLSYPVYRLMLSGVCAVLAVAMYLVITRTRFGMWVRAGASNRD 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       FA+ +A  G+AGA                     V+ ++    +
Sbjct: 180 MVAALGINVKLLFGVVFALGAALAGLAGAISTPITSVAPGMGDSVLILCFVVVVIGG--V 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++                             +  +   +  V+L +   
Sbjct: 238 GSIKGAFLGAMLIGLADTFGKVF--------------VPDFASFTVYGVMAAVLLWKPRG 283

Query: 339 LL 340
           L 
Sbjct: 284 LF 285


>gi|190892082|ref|YP_001978624.1| ribose ABC transporter permease [Rhizobium etli CIAT 652]
 gi|190697361|gb|ACE91446.1| ribose ABC transporter, permease protein [Rhizobium etli CIAT 652]
          Length = 326

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 97/312 (31%), Gaps = 21/312 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   + L        S +   ++  QI +  + A G++ V+   G + L+   A A
Sbjct: 27  LVGLLALCIFLSFSTDTFLSVRNGLNILDQITVLGIMAVGMTFVILIGG-IDLSVGSALA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +         +  GL + + I  + + S   G+I+GL   +FR                 
Sbjct: 86  LAMMVMGWTANVAGLPLPVGIAFALIASAISGLIVGLLVTQFRVPAFIAT---------- 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  + +   G+                         F +    ++ +L  +     
Sbjct: 136 -----LAMMSAARGVANMITDGQQIVGFPDWFMMLAIDRHFGVMTATVFLMLAVVLAAWL 190

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +               +  N +        +    +S + VS+   G+AG   AA  D 
Sbjct: 191 FLHFRSE----GRMLYAVGGNPEVARLAGINVPLVTISVYVVSAVLAGLAGIVLAARLDS 246

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           + P        +  I+ V++GG +           LIGV+ +    N     ++  F   
Sbjct: 247 VQPSS-GLGYELDTIAAVVIGGTSLSGGAGGIGGTLIGVLIIGVLRNGLNLLNVSPFLQQ 305

Query: 316 FNMRHTTLMVIA 327
             +    ++ + 
Sbjct: 306 VIIGIVIVLAVG 317


>gi|192290000|ref|YP_001990605.1| branched-chain amino acid ABC transporter inner membrane protein
           [Rhodopseudomonas palustris TIE-1]
 gi|192283749|gb|ACF00130.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 287

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 94/293 (32%), Gaps = 26/293 (8%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
             Y + A G+ +V G  G+++       ++  +  + L S + L  ++   ++  +    
Sbjct: 16  STYGLLALGMGLVYGVSGIVNFAHGDFISLAMFMALALFSAFALDPYVSALITIPVMALI 75

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G ++    L+    +  +  + ++     +L     +  G                  S+
Sbjct: 76  GGLVYRYLLRPMAGHQFLMIVQLTLGLSLVLQNGILMVFGGQ-----------PARTPSI 124

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
           +         V+  +           ++  + + LR T    + R +  N +A   +   
Sbjct: 125 VESKLIILGDVVLRLPHLIAFAVAFAMAIGLYVMLRATDFGRSIRAVHQNARAAALMGVD 184

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +   ++  FA+  A + +A A                   +I + +V+LGGMT+   I  
Sbjct: 185 VGRVQVVTFAIGVAILAVAAALLLPGTPI--TPTQGLQYTVITLLVVVLGGMTNFVSIML 242

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           +  ++                 L+                   L++L R   L
Sbjct: 243 SGLVIGISEAFGQIYVSDTLGRLVP-------------YAIFVLIMLFRPQGL 282


>gi|332703431|ref|ZP_08423519.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332553580|gb|EGJ50624.1| ABC-type transporter, integral membrane subunit [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 298

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 87/297 (29%), Gaps = 13/297 (4%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
             +      + I+S      +Y + A G +++  S  L++        +G      L   
Sbjct: 8   PAVLLLYFAQIINSGLALGSVYGLMAIGFALIYNSSRLINFAQGELLLLGGLGLFSLTQA 67

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             L+ +L +  +++     G  +   +L        +  L+++     +      +  GK
Sbjct: 68  MELNPFLALAAASIWGFLLGHFLYATTLGLAMSQSPLRQLMLTVAASLVWQGLAILVWGK 127

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
             + +A  L                    + +       ++      A++  +LR T   
Sbjct: 128 KPLLLAQLLPMPEVR-----------LGSLYFGRDTVTAMVLALASGAALSFFLRHTRRG 176

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
            A R +  N  A          +   AFA++     MAG                    +
Sbjct: 177 RAIRAVSMNPLAARLQGINPKASHALAFALAGVLACMAGMAVGPQTML--RYDMGLGLGL 234

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLM 324
                  +GG +SLS++      L  +      +        L F     +     M
Sbjct: 235 KGFVAATIGGYSSLSRVFLGGLGLGLLEAALVLLVSAELKEALSFSLLIGLMLLMPM 291


>gi|187919888|ref|YP_001888919.1| monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
 gi|187718326|gb|ACD19549.1| Monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
          Length = 352

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 46/319 (14%), Positives = 89/319 (27%), Gaps = 10/319 (3%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
                L  V  L++            +  +        +FA G ++VV + G + ++   
Sbjct: 40  WFTLALIAVTCLIVGAINPRFFQLATLFDLLHSATTMSLFALG-TLVVLASGGIDVS--- 95

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
             AI A +   +                +I+GA G ++           L   +LI++  
Sbjct: 96  FTAIAALTMYGITKAVFAWWPDAPFALILITGALGGVVLGIVNGLLVHRLKAPSLIVTIG 155

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            Q +         G                +             V+    +  V   +  
Sbjct: 156 TQYLYRGLLLTFIGTTFFMNIPHSMDRFGRIPLFFYHTADGLRAVLPVSVVALVAAAVVT 215

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
                     RT +      +  +      L   +    L  F  +    G+AG    ++
Sbjct: 216 WWLL-----NRTMMGRGVYAMGGSLAIAERLGYNLRAIHLFVFGYTGMLAGIAGILHVSN 270

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
               +P        + VI+ VILGG             L+GVV +    +      +   
Sbjct: 271 NRLANPFDL-VGTELDVIAAVILGGARITGGTGTVAGTLLGVVLVTLINSVLILVGVPST 329

Query: 313 DCSFNMRHTTLMVIALFLV 331
                +    L+   LF +
Sbjct: 330 WQKVIIGAFILIAGTLFAL 348


>gi|115523025|ref|YP_779936.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
 gi|115516972|gb|ABJ04956.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53]
          Length = 291

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/308 (12%), Positives = 84/308 (27%), Gaps = 27/308 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +++ S      +Y + A G ++V  +  +++        +G    V   +         +
Sbjct: 7   QFLVSGLTVGAVYALVALGFTLVYHASDVVNFAQGEFVMLGGMVTVFAYAAGVPLPLAAL 66

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                       +  L     RG       +I       +    + +             
Sbjct: 67  LAVTAAVVVGLALYWLAIAPARGASAVSLIIITIGASILLRGAAQIV------------F 114

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 + +              +   ++VL G   +   +   + RT I  A      N
Sbjct: 115 DKQFHKLPAFSGDTPVDLFGAAIQPQSFWVLGGAALIVLILYYVMERTLIGKAVVATAAN 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A   +   I      AF  S+A   +AG         ++         +   +  +LG
Sbjct: 175 RLAAQLVGVNIATVMALAFGGSAAIGAIAGILITP--ITLTSYDVGTLLALKGFAAAMLG 232

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           GM +         +L  +     G     +   + F             I +  V+ +  
Sbjct: 233 GMGNPLGAIIGGLLLGLLESFGAGYLSSTYKDAIAF-------------IVILAVLFVAP 279

Query: 337 HSLLRLRT 344
             L+  RT
Sbjct: 280 QGLVGRRT 287


>gi|283853728|ref|ZP_06370956.1| ABC-type branched-chain amino acid transport system permease
           component-like protein [Desulfovibrio sp. FW1012B]
 gi|283570878|gb|EFC18910.1| ABC-type branched-chain amino acid transport system permease
           component-like protein [Desulfovibrio sp. FW1012B]
          Length = 146

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 41/110 (37%)

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A +   +R + +  A    RD++ A  SL       +  +F +       AG        
Sbjct: 5   AYLFQAMRDSRLGRALAACRDDRHAASSLGIDRPAVRAVSFGLGGGLSAAAGVIHGHYIG 64

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            ISP+ F    ++  +  +++GG  +L +   A  +L   +     +   
Sbjct: 65  FISPEQFNLELSLKALLFLVIGGPGNLLRPLLAALVLETAMGWLQVLGEA 114


>gi|317127111|ref|YP_004093393.1| inner-membrane translocator [Bacillus cellulosilyticus DSM 2522]
 gi|315472059|gb|ADU28662.1| inner-membrane translocator [Bacillus cellulosilyticus DSM 2522]
          Length = 319

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/296 (10%), Positives = 89/296 (30%), Gaps = 26/296 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             +Y   +  + +     + L      +   + ++  Q  +  +    ++ V+     + 
Sbjct: 14  WRQYIVYIAFVLLFIYFAVTLSNEGFLTTNNLMNIARQTAMISIMGVAMTFVIA-SKEID 72

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+ A +  +          L +  + ++  A G+++G  +          + L
Sbjct: 73  LSVGSVAALSAITTALTMQAG-----LGMITAVIVGLATGLLIGFINGYLVTKIAIPSFL 127

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           +   +          I+                T    +              + +  +L
Sbjct: 128 VTLAMMMIARGLAMWISG---------------TAPIPISSESYIFLFGSGDILGIPILL 172

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +    ++      LR+T           N+ A        +  K++ F VS     +AG 
Sbjct: 173 VWTLIIAVLGHFVLRKTTFGRQTLAAGGNETAATFSGIRTMKIKMTVFMVSGMAAALAGM 232

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELC 298
            +A           +  E  ++ +++     + GG+ ++      + ++  +    
Sbjct: 233 LYAGRLHAGRFTFGQGDELSVIAAVILGGTSLFGGVGTVVGTIFGSIMIGTINNAL 288


>gi|163732213|ref|ZP_02139659.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter litoralis Och 149]
 gi|161394511|gb|EDQ18834.1| branched-chain amino acid ABC transporter, permease protein
           [Roseobacter litoralis Och 149]
          Length = 208

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 72/197 (36%), Gaps = 15/197 (7%)

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             G      +   G      I      ++     +  Y+  + +  ++ + +  L  + +
Sbjct: 20  TNGAKGITNIPLPGAISVFGIPLVPDFATLENSRMAFYFTAVILMVITYAALYRLVNSRL 79

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
            +  R+++ N++   S+   I + ++  FA+SS F G+ GA F +    + P  F   ++
Sbjct: 80  GHLCRSMQQNEELASSIGVNITYIRILIFAISSFFGGVGGAMFGSISQSVYPATFVVKDS 139

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           +  +    LGG+  +      T +L    +L                  F      +   
Sbjct: 140 VDFMLNCFLGGLGFVFGPMLGTLVLYFGWDLL---------------FEFGKYQMLIYAT 184

Query: 327 ALFLVILMRSHSLLRLR 343
            L L+I    + LL LR
Sbjct: 185 LLILIIRFLPNGLLSLR 201


>gi|163743623|ref|ZP_02150999.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161383094|gb|EDQ07487.1| branched-chain amino acid ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
          Length = 328

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/324 (11%), Positives = 98/324 (30%), Gaps = 33/324 (10%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV----------------- 82
            +  +  ++Y + A G  ++  + G+ +    +     A + V                 
Sbjct: 13  LNGLMAGVLYALVALGFVLIYKASGIFNYAQGVMALFAAMTLVGIMNGQVPFSHVINAIF 72

Query: 83  ---ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
              I    + +  ++ I ++  +      ++    ++       I   + +      L  
Sbjct: 73  GGHITHFGWTVPSFIAILMTVGVMVLLAWMVQHFVMRHLVGQEPIILFMATIGLAYFLEG 132

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              +  G     +   L            +  F   F I  + +   ++    +   +  
Sbjct: 133 VADLMWGSEIKALDVGLPQGINLWIDETTYQIFDYGFFIDNLDIVATVIAALLVMGLVA- 191

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
           + + T    A R + D+ +A  S+  ++ F  +  ++V+     +AG  +          
Sbjct: 192 FAQYTKQGRAMRAVADDHQAALSVGISLNFIWVLVWSVAGFVALVAGIMWGTKSGVQFSL 251

Query: 260 MFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
                  +  + +++LGG TS+        I+    +L   M         +   +    
Sbjct: 252 S---LIALKALPVLMLGGFTSIPGAIVGGLIIGVGEKLFEFMIGPMVGGATENWFA---- 304

Query: 320 HTTLMVIALFLVILMRSHSLLRLR 343
                 +   L ++ R   L   +
Sbjct: 305 -----YVLALLFLVFRPQGLFGEK 323


>gi|332982912|ref|YP_004464353.1| xylose ABC transporter membrane protein [Mahella australiensis 50-1
           BON]
 gi|332700590|gb|AEE97531.1| xylose ABC transporter membrane protein [Mahella australiensis 50-1
           BON]
          Length = 379

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/359 (10%), Positives = 93/359 (25%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  L  ++ +   L  G   + + + ++  Q+ I  + A G+ +V+   G + L+
Sbjct: 13  RSYTMILALVAIWIIFTALTGGGFLTPRNLSNLIRQMSITAILAVGMVLVM-VAGHIDLS 71

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA---- 125
                        I+   YG S    I V+  +    G+  G                  
Sbjct: 72  VGSVAGFTGALAAIMQVNYGWSTPTTIIVTLGVGLLIGLWQGFWIAYQGVPAFITTLSSM 131

Query: 126 -------------------------------------TLIMSEIFQNILIKWKPITNGKA 148
                                                 L +      ++ + +       
Sbjct: 132 LVFRGAILLVTKGVTISPLSDSFKLVGQGYISPSISIILGIVGGILYLVFEMRSRQAKIK 191

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                         +  ++         +I    +   +L +  L   +      T    
Sbjct: 192 YGIDVSGWNIEIMRIIGVLLLISLFVGIMISYEGIPVPVLIVLGLVIIMTFIANNTTFGR 251

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N++A       I    ++ F +      +AG    +  +  +       E   
Sbjct: 252 YVYAIGGNREAAAYSGVNIKKTNMTIFLIMGILSALAGIVLTSRLNAATTSAGTGFEMDA 311

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + S +I     LGG+ ++        ++  +      MN  Y    +       +    
Sbjct: 312 IASAIIGGTSTLGGVGTVPGAIIGALVMASIDNGMSLMNIDYSILTIVKGLVLVLAVWM 370


>gi|260462629|ref|ZP_05810835.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
 gi|259031535|gb|EEW32805.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
          Length = 331

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/317 (13%), Positives = 92/317 (29%), Gaps = 24/317 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             + +  L +  ++        +    S + + ++  Q  + ++   G ++V    G + 
Sbjct: 20  FARQELALLVCFILVLAFFSFTVENFFSVRNLTNVLGQASLPLIAGIGCAVVF-ISGEVD 78

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++     A  A   +I+ +     +  +                     +   Y  I +L
Sbjct: 79  ISIGSLLATIALPLIIIMNDTNSLLLGIGGALLFGLIIG------VVNGYLTAYAGINSL 132

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I++     I+     +  G+  I     L                  S       + Y  
Sbjct: 133 IVTLGTMFIMRGGVYLYTGQRAIPDDASLDSF------------IALSDGRLFNIIPYSA 180

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +    L A+    ++          +  NQ+        +   K   F +S+    +AG 
Sbjct: 181 VIAIVLLAAFAYMMQHRPFGRQIYAVGGNQEVARLAGYDVRRVKFICFIISALLATVAGI 240

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
             AA             E  +V + V+      GG+ SL+ +A    IL  +     G+ 
Sbjct: 241 ILAARVGSAQHTAGLNFEFQVVAATVLGGVSLAGGIGSLTGMALGVLILQFLSNGLRGLG 300

Query: 303 FYYFNSLLKFDCSFNMR 319
                 L+         
Sbjct: 301 LPTEWQLVITGMIIIAA 317


>gi|220923342|ref|YP_002498644.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
 gi|219947949|gb|ACL58341.1| inner-membrane translocator [Methylobacterium nodulans ORS 2060]
          Length = 300

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 95/300 (31%), Gaps = 26/300 (8%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            I  ++  +   GLS++ G LG+++      Y +GAY      +  G     ++  +  +
Sbjct: 24  LIVGMLLFLVTSGLSLIFGVLGIINFTHGAFYMLGAYFAFTAYALSGSFAAAMVAGAVGV 83

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                +   L   +  G  + +  L+   +   +    K +  G           +    
Sbjct: 84  GLFGVLFERLIMSRVYGRDILMQLLVCYAMILILDDGVKLLYGG----------EYRLMG 133

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +           +      +  +++         + L + RT +    R +  N +   +
Sbjct: 134 MPDAFALPPVEVAGGFVPGYYLFMVAVAFAAGLVLWLGINRTRLGKIVRALAINPQMVGA 193

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L           F + S   GMAGA  A  R          S  I    + ++GGM S++
Sbjct: 194 LGINTTLLYAGVFGLGSLLAGMAGALAAPIRTL--TPGMGLSILIESFIVTVIGGMGSIA 251

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
               A  ++                        F +    +M   + LV++++   LL  
Sbjct: 252 GAFIAALLIGFTRAFG--------------AIGFPLFVDGMMFAMMALVLIVKPSGLLGR 297


>gi|39936359|ref|NP_948635.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009]
 gi|192292087|ref|YP_001992692.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 gi|39650214|emb|CAE28737.1| possible ABC transporter subunit (U75364) [Rhodopseudomonas
           palustris CGA009]
 gi|192285836|gb|ACF02217.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 335

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/335 (13%), Positives = 102/335 (30%), Gaps = 42/335 (12%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +   +   Y + A GL++  G+LG+++      + +GA+   ++ +++     + I  
Sbjct: 8   ILNGLDKGGAYALIALGLTLAFGTLGVVNFAHGALFMLGAF-CAVVFNKFLTLEIVKIDP 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +        + +  P ++          +  S     +L     +  G        R ++
Sbjct: 67  TRTTPWGSPLEVKTPYVQAMLGDWGKVLIDYSVPVSILLAIPVMLLIGILIERGLIRFFY 126

Query: 159 LGTTVRSLIRFFRFPSSF------------------------------VIYEIFMYYVLL 188
                  ++  F                                    ++Y  +    L 
Sbjct: 127 KRPHADQILVTFGLAIVLQEIVKHFFGANPIAQSAPALFSGSLQITEAIVYPYWRIVYLC 186

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
               +  S+  +L+ T      R    +++    L   I       F +++   G+AG  
Sbjct: 187 FSLVVIGSVFAFLQLTTFGMVVRAGMQDRETVGLLGINIERRFTIVFGLAAIVAGLAGVM 246

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
           +             F     V+ +V    M SL     A  +L  +           F S
Sbjct: 247 YTPIVPPDYHMGMDFLVLSFVVVVVGG--MGSLPGAVLAGFLLGILQS---------FAS 295

Query: 309 LLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
           + +           ++ +   +V+L+R   LL  +
Sbjct: 296 MNEIKGLLPGIDQIIIYLVAVVVLLVRPRGLLGRK 330


>gi|325962581|ref|YP_004240487.1| ABC-type uncharacterized transporter, permease component
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468668|gb|ADX72353.1| ABC-type uncharacterized transport system, permease component
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 457

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/291 (10%), Positives = 82/291 (28%), Gaps = 7/291 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
                      +    G+++     GL ++       +       +G    L + L + +
Sbjct: 145 FMETLTIATPLITAGLGVALAF-RAGLFNIGAQGQIIVAGILAAWVGFALDLPMGLHLLL 203

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +     G   G      +    A   ++        L   + + N  A     +    
Sbjct: 204 VLVAGIVGGAFWGGLVGLLKARTGAHEVILTIMFNYIALYFLRYLLNTPAFQRPGESNPI 263

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 + +         +  +  ++   +     +  +   L R+ +   +R +  N K
Sbjct: 264 SPILDPTAVYPQ-----ILGTQYRLHLGFVLAIAATVLVWWLLNRSTVGFEFRAVGANPK 318

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  +    +  A +   A++    GM+G    A  +++  D    +     I++ +L G 
Sbjct: 319 AAQTAGINVSRATILVMAIAGGLAGMSGVAQVAGTEKVLTDGVAATYGFDAITVALL-GR 377

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           ++      A  +          M       +       ++    +    L 
Sbjct: 378 STPWGTFAAGLLFGAFRAGAVQMQIQTGTPIDIVLVVQSLIVLFIAAPPLV 428


>gi|254712900|ref|ZP_05174711.1| monosaccharide-transporting ATPase [Brucella ceti M644/93/1]
 gi|254716746|ref|ZP_05178557.1| monosaccharide-transporting ATPase [Brucella ceti M13/05/1]
          Length = 329

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 90/301 (29%), Gaps = 21/301 (6%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      S   + ++  +     + A G + V+ S G L L+     +I           
Sbjct: 38  IANPNFISIDNLLNVATRSAFIAIIALGATYVI-SSGGLDLSVAFVASIMILFMNSGMIA 96

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
             + + +   + A++ GA   ++        G    IATL    I++ +           
Sbjct: 97  DPVLMLIAAVMLALVVGAACGLLNGIITTVGGIEPFIATLGTMGIYRGLTTWLSQ----- 151

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
                         T+R+      +  ++    + +   ++ +   +A     L RT   
Sbjct: 152 ----------GGAITLRNPEIQSLYRPAYFGSVLGVPVPVIVIFVTAALAAFVLYRTRYG 201

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                +  N+        ++   +  AF +    + +A   +       S       E  
Sbjct: 202 RHIIAVGSNEDVARYSGISVKKVRTIAFVIQGLCVAVAVLLYVPRLGSTSATTGLMWELQ 261

Query: 268 IVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + ++V+      GG+  +        IL  +  +    +F     L     +  +    
Sbjct: 262 AITAVVVGGTALRGGVGRIWGTICGAFILEIIGNIMLLSSFVSEYLLGAIQGAIIIIAML 321

Query: 323 L 323
           +
Sbjct: 322 V 322


>gi|261345060|ref|ZP_05972704.1| ribose ABC transporter, permease protein [Providencia rustigianii
           DSM 4541]
 gi|282566742|gb|EFB72277.1| ribose ABC transporter, permease protein [Providencia rustigianii
           DSM 4541]
          Length = 329

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/321 (13%), Positives = 98/321 (30%), Gaps = 20/321 (6%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            LR    +  L  + ++      L      + + +  +     +  +FA GL  VV   G
Sbjct: 6   KLRPQSVEGWLTWVILIMVAFFTLMSPQFLTIQNLLDLSESYAVTGIFALGL-FVVLVTG 64

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYG-LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
            + ++     ++  Y       +    S  L I ++ +I  A G+I  +         + 
Sbjct: 65  GIDISFAAVASVVQYVIATFLLQGLLESPTLSIMLAIIIGIAFGLINAILIYSLNVVSII 124

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           I   + S +F  ++      +      +  D +  L   V         P   ++   F+
Sbjct: 125 ITISMQSLLFGMLMWLTNGHSIYDLPDWWVDPVTILPFEVDGEYYQIGLPLIVMLGIAFL 184

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
            +VL+              +T I      +  +Q++   +   +    L A+    A   
Sbjct: 185 TWVLM-------------NKTHIGRQLYAVGGSQESASRIGIRVSVIYLFAYGYLGAMAA 231

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELC 298
           + G         + P      E  ++ + V     + GG  S+        ++  +    
Sbjct: 232 IGGMLQTYRMSEVVPSALVGGELDVLAAAVLGGASLSGGRGSVIGTLMGVFLIGILKNGL 291

Query: 299 CGMNFYYFNSLLKFDCSFNMR 319
             +    +   +       + 
Sbjct: 292 NLIGVSNYFVNIVIGMVILIA 312


>gi|170780592|ref|YP_001708924.1| putative sugar transport permease [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169155160|emb|CAQ00260.1| putative sugar transport permease [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 395

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/356 (11%), Positives = 86/356 (24%), Gaps = 56/356 (15%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F +   +   I   L  +  L   L  G     + + S+ +Q    ++ A G+ +++   
Sbjct: 10  FLVSRLRQIGIFIALIAIVVLFQILTDGTLLEPRNVTSIVVQNAYILILAIGMVMII-IA 68

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+     A+      +    +G   W  I  S +I G  G   G            
Sbjct: 69  GHIDLSVGSVVALIGAVSGVFAVSWGWPWWASIIASLVIGGLIGAWQGFWVAYVGIPAFI 128

Query: 124 --------------------------------------------------IATLIMSEIF 133
                                                               TL +    
Sbjct: 129 VTLAGMLTFRGLAQIVLQNRPITPFPDEYVSVGAGFLPDPSGGNSYLEWVTVTLGVLAAI 188

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +  + +            +   +  T + ++       +  +        VLL +  L
Sbjct: 189 FLVAQQLRERRARVKLNLEDEPFAWFITKLATIAILVLGITYLLASYQGTPIVLLILAVL 248

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
                  + R+           N  A               F        +AG  F A  
Sbjct: 249 VLVYTAVMNRSIFGRHIYARGGNLNAAQLSGINTKRVDFLLFVNMGFLAALAGIAFTARS 308

Query: 254 DRISPDMFKFSENIIVIS-----IVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           +   P      E   + +       + GG+ +++       I+  +      +   
Sbjct: 309 NSALPSAGNGFELDAIAAVFIGGAAVTGGIGTVTGAMIGGLIMGVLNNGMSLLGLG 364


>gi|209546841|ref|YP_002278759.1| monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209538085|gb|ACI58019.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 311

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/327 (10%), Positives = 87/327 (26%), Gaps = 29/327 (8%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           + F     +    +  + +     + L      +   + ++  Q  +  + A  ++ V+ 
Sbjct: 3   NAFLSNWRQNIIYIGFVVIFIVFAIALNDKGFLNINNLLNIVRQTAMIAVMAIAITFVL- 61

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
           S G + L+      +   +  +  +  G S  +L  +   ++           +      
Sbjct: 62  SAGEIDLSVGAVAGLSTVTVAMAIAVGGPSAGVLAGIGTGLAVGIFNGWLTTRVGIPSFL 121

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
             +A + +++     +     +     G                                
Sbjct: 122 TTLAMMGIAKGVAMWISATAAVPILSPGYSW---------------------FFGGGNIG 160

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +  +L  M  L+    + LRRT            + A           K     +SS  
Sbjct: 161 RIPVLLFWMAILAVIGHIVLRRTGFGRRVLATGGGETASRYSGINTRDIKFKVLVISSCA 220

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVV 295
             +AG  +A              + + VI+  +LGG        ++        ++  + 
Sbjct: 221 AALAGMLYAGRLQS-GRFQLGEGDELSVIAAAVLGGTSLFGGKGTVVGTVVGALMIGLIN 279

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                M   +   L+       +    
Sbjct: 280 NGLILMGLEFSQQLIARGAIIILAVAL 306


>gi|307726434|ref|YP_003909647.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|307586959|gb|ADN60356.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
          Length = 399

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/359 (12%), Positives = 89/359 (24%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   +L  +A ++     L  GA  + + + ++  Q+ I  M A G+  V+   G + L+
Sbjct: 33  KILALLIAVAAIWIFFSVLTHGAFVTPRNLSNLLRQMSITGMLACGMVFVI-IAGEIDLS 91

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +      IL       I + +PV  ++    G+  G  S   R     +    M
Sbjct: 92  VGSLLGLLGGVAAILDVNRHWPIGVTLPVVMLLGVLIGLFNGWWSTYRRVPSFIVGLGGM 151

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI-------- 181
                 +L      T                  +                 +        
Sbjct: 152 LAYRGILLGVTGGSTIAPVSDSFVFVGQGYLPQLAGDTLAVVLFLLLAFLTVRQRRNRER 211

Query: 182 ---------------------------------FMYYVLLGMCFLSASIILWLRRTAISN 208
                                             +   +L +  L         +T    
Sbjct: 212 YQLSVVPVWQDVAKVVGAGAILAGFVATLDRYGGIPVPVLLLLALLGIFTWIATQTVFGR 271

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               +  N +A           KL+ FA+       AG    A     SP      E   
Sbjct: 272 RIYAVGSNLEATRLSGVNTDRVKLAIFALMGLMCAFAGIVNTARLAAGSPSAGSMGELDA 331

Query: 269 VISIVILG-----GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + +  I G     G  ++        ++  +      ++   +  ++       +    
Sbjct: 332 IAACFIGGTSMRGGSGTVYGALIGALVMASLDNGMSMLDVDAYWQMIVKGGILVLAVWI 390


>gi|256394413|ref|YP_003115977.1| Monosaccharide-transporting ATPase [Catenulispora acidiphila DSM
           44928]
 gi|256360639|gb|ACU74136.1| Monosaccharide-transporting ATPase [Catenulispora acidiphila DSM
           44928]
          Length = 337

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 98/319 (30%), Gaps = 29/319 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           ++D ++  L V+   + F  +    +   I  +    L     A  ++++V   G + L+
Sbjct: 19  RWDTVVGALLVILLAVSFSTVNGFSNALNISFLIGNTLPVAAIALPMTMLVA-SGEIDLS 77

Query: 70  CVIAYAI-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
                 + GA    +      ++  ++I  +  I       + +  L      + I TL 
Sbjct: 78  VGSTVGLSGAVMGALWNHGMNINAIIVICAALGIVCGLVNALLVTKLGLPSLAVTIGTLA 137

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
           +      I++    +T+                             S  +   F+   ++
Sbjct: 138 LYRGVAQIVLGSNSVTDFPQNYLNF--------------------GSGRLGGSFLPTAVI 177

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
               L+    + L  T    +   +  + +A +     +   KLS F  +     + G F
Sbjct: 178 PWLVLAVLAAVVLHATGFGRSVFAVGASAEAAWFAGVRVKRVKLSLFVATGLVSSLTGVF 237

Query: 249 FAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMN 302
           +       +         + V++ V+LGG+       +L        +L  +  +    +
Sbjct: 238 WVLHYASATYSNAT-GLELSVVAAVLLGGVDFDGGRGTLGGAIAGVFLLGTMQNVMSLAD 296

Query: 303 FYYFNSLLKFDCSFNMRHT 321
               +  +       +   
Sbjct: 297 VSAQSQTVVTGVLLTVSVL 315


>gi|241258869|ref|YP_002978753.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240863339|gb|ACS61002.1| inner-membrane translocator [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 335

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/325 (10%), Positives = 89/325 (27%), Gaps = 27/325 (8%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           S FSL  +  +  L +  V+  ++         S     ++        + AW  ++++ 
Sbjct: 18  SRFSLSQHMNELSLFVAIVILYVVFTATANGFLSFNNQINILRDAATIGIAAWAATLII- 76

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G + ++     A  +     L      +         + +    +   L +      +
Sbjct: 77  IAGEIDVSVGPMVAFISVVLAFLLQWGVPTPIAFALAILVGAMLGSIAGALRAYFDVPSF 136

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
           +    L            W  +      +  A  +          +             +
Sbjct: 137 VGTLGL------------WSALRGTALFVTDALPVSIGRNDTLDALDRSFLGIPPAAIIM 184

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            + +         A      R+T    +   I  N  A F    ++   +++ FA++ A 
Sbjct: 185 LILF---------AVFTFISRKTPFGRSVFAIGGNAHAAFLSGISVSKIRVALFAIAGAM 235

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
             ++G    +     +       E  ++ ++V+      GG  S+        ++  +  
Sbjct: 236 AAISGILLLSRLGSGNATAATGLEFDVIAAVVVGGTSLSGGRGSMLGTLLGVLVITLIGN 295

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHT 321
               +    F   +       +   
Sbjct: 296 GLVLLGINPFFQQVVRGLIIVIAVL 320


>gi|15890148|ref|NP_355820.1| ABC transporter, membrane spanning protein (sugar) [Agrobacterium
           tumefaciens str. C58]
 gi|15158320|gb|AAK88605.1| ABC transporter, membrane spanning protein (sugar) [Agrobacterium
           tumefaciens str. C58]
          Length = 325

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/294 (14%), Positives = 94/294 (31%), Gaps = 13/294 (4%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I+  + +   +++ L   A  S   I  +    ++  + A G+ +V+   G + ++   
Sbjct: 9   FIIACVLLAAMIIIGLINPAFWSLDNIFGLLRSNVVIGIMALGVLLVM-ISGGIDVSFTA 67

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
                 Y  V      G    L+  V+A + G          +        I TL    I
Sbjct: 68  FAIAAMYLTVRSMVYLGYDGVLIPFVAATLIGLVLGAFNGLIIHRFRMIPLIVTLGTGSI 127

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            + +++       G  G  + +        +          +S       +  + L    
Sbjct: 128 VRGLVL-------GLVGTSIVNINKMPKELIEFGKTDVISLTSATGSTFGLTAMFLVYLG 180

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L+  I L L  T I  +      + +A   +           + ++ A  G +G   ++ 
Sbjct: 181 LALVIHLILTYTMIGRSVYAYGGSPEAAKRVGFNTGATIFFVYCIAGALAGFSGLLHSSM 240

Query: 253 RDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
               +P  F   E  ++ ++V     I GG  ++        +L+ V      M
Sbjct: 241 IWLANPRDFVGLELDVIAAVVLGGASIFGGRGTVLGTLMGVFMLVMVKNSLIIM 294


>gi|325579020|ref|ZP_08148976.1| galactoside ABC superfamily ATP binding cassette transporter,
           membrane protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325159255|gb|EGC71389.1| galactoside ABC superfamily ATP binding cassette transporter,
           membrane protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 336

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/297 (8%), Positives = 79/297 (26%), Gaps = 8/297 (2%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               + +   ++  Q  + ++ A G++ ++ + G   L+      + A     L      
Sbjct: 34  PTFLNVRNFSNILTQSSVRLIIALGVAGLLITQG-TDLSAGRQVGLAAVISATLLQSMEN 92

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              +   +  +      + +             +   +    F   +     +    +  
Sbjct: 93  MNRVFPDLGEIPIPVVILTVCAVGAVIGLVNGLVIAYLNVTPFIATMGTMIIVYGFNSLY 152

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
           Y       +     S   F +       +++    +   +C     ++    +T      
Sbjct: 153 YDGVGGSPIAGFSESFSNFAQGFFRLGSFKLSYITIYAAICAFLVWVMWN--KTRFGKNI 210

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N +A       +    +  + ++  F    G   A      + ++    E   + 
Sbjct: 211 FAIGGNPEAAKVSGVNVARNLVVIYMIAGMFYAFGGMLEAGRIGSATNNLGFMYELDAIA 270

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + V+      GG+ ++  +     I   +      +    +   +       +    
Sbjct: 271 ACVVGGVSFAGGVGTVIGVITGVIIFTVINYGLTYIGVNPYWQYIIKGSIIILAVAI 327


>gi|315428033|dbj|BAJ49621.1| branched-chain amino acid ABC transporter permease [Candidatus
           Caldiarchaeum subterraneum]
          Length = 292

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 98/318 (30%), Gaps = 29/318 (9%)

Query: 29  FLGATKSQKYIDSMGIQIL---IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
            LGA    + + ++   ++   +Y + A GL+++ G   L++        +  Y   +  
Sbjct: 1   MLGADFGVQLLQTILFGVMLGGVYALAAMGLALLFGVANLVNFAHGEYIMLAMYMAFVFS 60

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
                   L    +  +  A G+I  L   K       ++ +  +     +L        
Sbjct: 61  VTIFQDPVLTPMFNIPLFFAIGVITYLGIFKRLIKAPPLSQIAATVGILVLLRNLALAIW 120

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                                +    F    VI  +     +L        + L+L RT 
Sbjct: 121 AAEPKAPPY-----------TVFATSFNIGPVIVPLDKLLAMLVSLVTLLVLNLFLERTR 169

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +  A R   D+ +A   +        L    +S A +G++G+     +            
Sbjct: 170 LGVAMRASADDVEAVSLMGVDTNRLFLLTAGISLALVGLSGSLIMTYQAV--TPTSGLLF 227

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
            ++  +IV L G+ ++  I  A+ I      L  G+                     ++ 
Sbjct: 228 GLLTWAIVALAGLGTVKGILIASIIFGLADSLASGLWDPRG-------------REIVLY 274

Query: 326 IALFLVILMRSHSLLRLR 343
               L++ +R   L   R
Sbjct: 275 GLFILILWIRPKGLFGRR 292


>gi|300717870|ref|YP_003742673.1| D-xylose ABC transporter permease [Erwinia billingiae Eb661]
 gi|299063706|emb|CAX60826.1| D-xylose ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 392

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 105/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  + V+     F   GA  S + I ++  Q  I  + A G+  V+     + L+    
Sbjct: 31  MLAAIVVIMLFFTFTTEGAYLSARNISNLLRQTAITGILAVGMVFVI-VSAEIDLSVGSM 89

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +   +  I     G  + L I V+ +     G   G      +               
Sbjct: 90  MGLLGGAAAIFDVWLGWPLPLTIVVTLLAGVLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 149

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS + Q+ L        G  G+ +     +     R+ +   
Sbjct: 150 GVLIGITNGTTVAPTSDAMSLMGQSYLPGGLGFGIGAVGLMLFVAWQWRRRARRAQMGLP 209

Query: 171 RFPSSFVIYEIFMYYVL------------------LGMCFLSASIILWLRRTAISNAWRT 212
              +S  +    +  ++                  L +  L  + +    RTA       
Sbjct: 210 VASASGDVTRQSIMAIIVLGAVYLLNDYRGVPTPVLILTALMLAGMFMATRTAFGRRIYA 269

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N  A       +   K++ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 270 IGGNIDAARLSGVNVERTKMAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 329

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 330 VIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGAILLLAVWM 384


>gi|282864639|ref|ZP_06273694.1| inner-membrane translocator [Streptomyces sp. ACTE]
 gi|282560578|gb|EFB66125.1| inner-membrane translocator [Streptomyces sp. ACTE]
          Length = 349

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/318 (12%), Positives = 92/318 (28%), Gaps = 25/318 (7%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +L +LAV+  +       A      +  +  Q  +  +   G++ V+   G + L+
Sbjct: 42  RNLSLLGVLAVLVAVGGITEPDAFLDTGNLQLILTQASVIGVVTVGVTFVI-ISGGIDLS 100

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                A+   S            +  I  +A++ G    ++    + + G    IATL M
Sbjct: 101 VGAMVALA--SVWATTLATQEYGFAGILFTAVVVGLAAGLVNGLLIAYGGMVPFIATLAM 158

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
               + + ++                    G T    +R          Y + +  ++L 
Sbjct: 159 LASARGLALQITD-----------------GKTQIVTVRSVLDLGLPDSYVLGIPPLVLV 201

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              ++ +  L L RT        +  N +A       +   +L  + +S    G+A    
Sbjct: 202 FAAVTVAGWLILNRTTFGRRTVAVGGNAEAARLAGIDVRRQRLYLYLLSGLCCGIAAFML 261

Query: 250 AASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFY 304
                          E   + + +I      GG  ++        +   +  +    N  
Sbjct: 262 IILSGSGQNTNGNLYELDAIAAAIIGGTLLSGGRGTIIGSVLGVLVFTTITNIFALNNLQ 321

Query: 305 YFNSLLKFDCSFNMRHTT 322
                +            
Sbjct: 322 SDVQQIAKGAIIVAAVLV 339


>gi|163841890|ref|YP_001626295.1| sugar transport system permease protein [Renibacterium salmoninarum
           ATCC 33209]
 gi|162955366|gb|ABY24881.1| sugar transport system permease protein [Renibacterium salmoninarum
           ATCC 33209]
          Length = 342

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 91/291 (31%), Gaps = 13/291 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +    + A+V  +   +   A        ++        + A G+S+++   G   
Sbjct: 20  LARPEIGSLVGAIVVLVFFAIVAPAFLQPASFATVLYGASTIGIMAVGVSLLM-IGGEFD 78

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A    A +  +    + L+IW+ + ++ ++S   GM+ G    K +       TL
Sbjct: 79  LSTGVAVISSALTASLFSWYFVLNIWVGVGLALVVSLGIGMLNGWILTKTKLPSFI-VTL 137

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               +   + +    +  G         +                    +   +F +  L
Sbjct: 138 ATFLMLTGLNLGLTRLVGGSVASPGISDMDGFALAKSIFAATVNIGGVDIQITVFFWLAL 197

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +            RT + N    +  +  A  ++   +   K+  F        + G 
Sbjct: 198 VAIASWILL------RTKVGNWIFAVGGDAAAARAVGVPVAKTKIGLFMGVGFCGWLLGM 251

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIG 293
               +   +       +E + +I+ VI      GG  S    A    I   
Sbjct: 252 HNLFAFGAVQSGEGVGNEFLYIIAAVIGGCLLTGGYGSAIGGAIGAFIFGM 302


>gi|162148408|ref|YP_001602869.1| ribose transport system permease rbsC [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209543018|ref|YP_002275247.1| Monosaccharide-transporting ATPase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161786985|emb|CAP56570.1| putative ribose transport system permease protein rbsC
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530695|gb|ACI50632.1| Monosaccharide-transporting ATPase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 339

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 87/317 (27%), Gaps = 23/317 (7%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +L +L ++             S + +  +  Q  I ++ + G++ V+   G + L+  
Sbjct: 30  AGMLPVLVLLAICFHVFGGHRFLSGQNLSIVAQQAAINIVLSAGMTFVI-LTGGIDLSVG 88

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
              A  A    ++ S      WL IP         G+  G      +     +       
Sbjct: 89  STLAFSA-MGGLMVSLVPGLGWLAIPTCLAAGLLVGLFNGSLIAGLKIPPFIVT------ 141

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
                            G+                  +       V   + + ++ +   
Sbjct: 142 ---------LGTLTAVRGLARLMGADRTIFNPSLSYAWIGNDGIPVTSTLVIPWLAVIAL 192

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            +  +    LRRT +      +  N  A       +    +  +A+S    G+ G   +A
Sbjct: 193 VVVVTCWFVLRRTVLGVHIYAVGGNPAAARLAGINVPAVLMFVYALSGLLAGLGGVMSSA 252

Query: 252 SRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYY 305
                +      S  +  I+ VIL      GG+ S+        ++  +      +    
Sbjct: 253 RLYAANGLQLGQSYELDAIAAVILGGTSFVGGIGSVWGTLVGGLMIAVLSNGLILIGVSD 312

Query: 306 FNSLLKFDCSFNMRHTT 322
               +       +    
Sbjct: 313 IWQFIIKGLVIIVAVAL 329


>gi|121606409|ref|YP_983738.1| inner-membrane translocator [Polaromonas naphthalenivorans CJ2]
 gi|120595378|gb|ABM38817.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 291

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 82/239 (34%), Gaps = 19/239 (7%)

Query: 45  QILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY---SYVILGSRYGLSIWLLIPVSAM 101
             +IY + A+G  +   +   L+     A  +GA    + V +G  Y L + L+I    +
Sbjct: 14  LGMIYAVIAFGYQLTFQTSDTLNFGQGDALMLGAMVGLTLVNMGVNYWLMLPLVIVFGLL 73

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
             G    I   P++K + ++  I + I   I    + +                      
Sbjct: 74  QGGLVERIGVRPAIKIKSEFGWIMSTIALGIIFKNVAENIW--------------GRDDL 119

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
              S +                  V+ G   +  ++  + R+T    A     +++ A  
Sbjct: 120 KFPSPLPESPLKVFGANVLPMEILVVAGAVLMMLAVEFFNRKTIYGKAVVATFNDRDAAK 179

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +          ++A+SSA    AGA  A     ++         +   ++ I+GG+TS
Sbjct: 180 LMGINTGLVITFSYALSSATAAFAGALIAPL--TLTGATMGSVLGLKAFAVAIIGGLTS 236


>gi|332087997|gb|EGI93122.1| ribose transport system permease protein rbsC [Shigella boydii
           5216-82]
          Length = 330

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/317 (10%), Positives = 86/317 (27%), Gaps = 29/317 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVGPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A                          +  A  +   +P        L      ++ + +
Sbjct: 88  AF-----------------------VSVCLAFLLQFEVPLACLMVLLLGALMGTLAGVLR 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +      +        +     F+   +   I             + +    L M  L 
Sbjct: 125 GVFNVPSFVATLGLWSALRGMGLFMTNALPVPIDENEVLDWLGGQFLGVPVSALIMMVLF 184

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+T    +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 185 ALFVFISRKTVFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 244

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 245 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 304

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 305 VVRGVIIVVAVLANILL 321


>gi|327189323|gb|EGE56491.1| ribose ABC transporter, permease protein [Rhizobium etli CNPAF512]
          Length = 326

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 97/312 (31%), Gaps = 21/312 (6%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +   + L        S +   ++  QI +  + A G++ V+   G + L+   A A
Sbjct: 27  LVGLLALCIFLSFSTDTFLSVRNGLNILDQITVLGIMAVGMTFVILIGG-IDLSVGSALA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +         +  GL + + I  + + S   G+I+GL   +FR                 
Sbjct: 86  LAMMVMGWTANVAGLPLPIGIAFALIASAISGLIVGLLVTQFRVPAFIAT---------- 135

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  + +   G+                         F +    ++ +L  +     
Sbjct: 136 -----LAMMSAARGVANMITDGQQIVGFPDWFMMLAIDRHFGVMTATVFLMLAVVLAAWL 190

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +               +  N +        +    +S + VS+   G+AG   AA  D 
Sbjct: 191 FLHFRSE----GRMLYAVGGNPEVARLAGINVPLVTISVYVVSAVLAGLAGIVLAARLDS 246

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           + P        +  I+ V++GG +           LIGV+ +    N     ++  F   
Sbjct: 247 VQPSS-GLGYELDTIAAVVIGGTSLSGGAGGIGGTLIGVLIIGVLRNGLNLLNVSPFLQQ 305

Query: 316 FNMRHTTLMVIA 327
             +    ++ + 
Sbjct: 306 VIIGIVIVLAVG 317


>gi|319781092|ref|YP_004140568.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166980|gb|ADV10518.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 322

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 90/312 (28%), Gaps = 27/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  VV   +    +    +++ + ++  Q  I    A G+++V+   G + L+     A
Sbjct: 25  LIGLVVILAVFGALVPGFFAERNLINILQQSSINACLALGMTLVI-ISGGIDLSVGPTAA 83

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           + A     +                + +G    +           ++ +   I++    +
Sbjct: 84  LSAVISASMMVAGVPFPLA------IAAGFAIGLACGLVNGVLVAHVGLQPFIVTLGTLS 137

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                  I  G   +                     F + F      +   ++ +  ++ 
Sbjct: 138 TYRALALIYTGGNPVLGLPP---------------GFRAVFNGSLFGLPLAVVIVACVAV 182

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              + L++T        +  N++A +     I   K++A+ +S     +A          
Sbjct: 183 VAWVVLKKTPFGEYLLAVGGNEEAAYIAGVPIARTKIAAYMISGLLAALAAQILIGRLGA 242

Query: 256 ISPDMFKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P +    E        +    ++GG  S+        IL  +      MN   F  LL
Sbjct: 243 AEPILGNLWELDAIAAAAIGGASLMGGKGSVVGTILGAVILGAMRNGLTLMNVQSFYQLL 302

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 303 ATGLIILAAMLI 314


>gi|309779308|ref|ZP_07674070.1| branched-chain amino acid ABC transporter, permease protein
           [Ralstonia sp. 5_7_47FAA]
 gi|308921866|gb|EFP67501.1| branched-chain amino acid ABC transporter, permease protein
           [Ralstonia sp. 5_7_47FAA]
          Length = 285

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 109/304 (35%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++Y + A GLSI+ G L  ++      YA+GAY       + G+  WL + +
Sbjct: 8   VVNGVGIGMLYFLLAVGLSIIFGLLRFVNFAHGAFYALGAYLC-FQALQMGMDFWLALVL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ GA   +     L+          ++++     ++ +   +  G  G+ V      
Sbjct: 67  APIVIGALAWVTEKVLLRHVYAQAHEFHILVTVGLALVVQELIIVAWGPLGVDVPAPDAL 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  +              +Y  +  +V+     L+ ++   L  T + +A R   ++ +
Sbjct: 127 QGVVMWGDF----------VYPKYRLFVIGFTAVLALALWWLLEGTRLGSAVRAGSESTE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       FA+ +A   +AG   A  R        +      V+ +V    M
Sbjct: 177 MVSLLGINVFRLFSLMFALGAATAAVAGVLAAPIRGAEPFMGVEALGVAFVVVVVGG--M 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +       ++  V  L   +              +      ++ +A+  V+L+R H 
Sbjct: 235 GSFAGALVGGLLVGIVQSLMSTL--------------WPEGARLMIYVAMAAVLLLRPHG 280

Query: 339 LLRL 342
           LL  
Sbjct: 281 LLGR 284


>gi|296531817|ref|ZP_06894631.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Roseomonas cervicalis
           ATCC 49957]
 gi|296267859|gb|EFH13672.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Roseomonas cervicalis
           ATCC 49957]
          Length = 293

 Score = 50.3 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 89/283 (31%), Gaps = 24/283 (8%)

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
            G L ++++       + A    +L +  GL   LL  + A      G  +      F  
Sbjct: 33  FGLLDVVNIAHPAFMVLAAMLVALLWAGTGLDPLLLSVLLAPAFWFLGAGLYSAYHHFFE 92

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
                A   ++  F  + I    +              +  TT         +    +  
Sbjct: 93  RRGDEAIQGLAFFFGVMFIIEVGLVLAVGPEQHFADAAYASTT---------WRLGEIDL 143

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
            + M             + L+LRR+ I  A   +  +++A   L    +  K  AF +S 
Sbjct: 144 PLRMLVPAAVSLVAIGLLALFLRRSFIGRAIAAVAQDREALRLLAIDPVRIKRIAFGLSI 203

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           AF  +AG   A  +   +     F     V +IVI+GG+ SL     A      V  +  
Sbjct: 204 AFAALAGGALAVVQPVDAWSGHVFIGR--VFAIVIMGGLGSLGGCVAAALAFGVVENVTA 261

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                 ++  + F C             L LV+  R   L   
Sbjct: 262 SFFGPSWSPAVAFGC-------------LLLVLAFRPQGLFGR 291


>gi|301054482|ref|YP_003792693.1| sugar ABC transporter permease [Bacillus anthracis CI]
 gi|300376651|gb|ADK05555.1| sugar ABC transporter, permease [Bacillus cereus biovar anthracis
           str. CI]
          Length = 317

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 89/305 (29%), Gaps = 27/305 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L ++Y  ++ +   +      +  M    +I V+ A G S V+     + ++   + 
Sbjct: 12  IITLLLIYIAIVGMINPSFIQFNSLSLMVKSSVILVVLAIGQSFVL-FTKNIDVSVGSSM 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     L +             ++ +      +             +  +IM+    
Sbjct: 71  GLSAAVCGTLLTNEYS------ASLSIFAAITLGAIIGFVNGIGVAKFRVPAIIMTLGML 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+     I  G   I                     F     I  + +   +  +  + 
Sbjct: 125 GIIRGAMLIFTGGKWIEDIP---------------NDFKQLSSIVILGLPITVWFVLIIL 169

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +  +LR+      +  + +N+     +   +   K+ AF +S     +AG  F  +  
Sbjct: 170 LLLYFFLRKVPFGRYFYAVGENEDGARLIGIPVNKVKICAFIISGISAALAGCIFVMNIG 229

Query: 255 RISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            I        E  ++ + V+      GG  SL   A     L  +      +    F + 
Sbjct: 230 FIPNQTGTGLELQVIAAAVLGGIHLKGGTGSLFGAALGALFLETISSSLVFLKIPAFWNN 289

Query: 310 LKFDC 314
                
Sbjct: 290 AISGF 294


>gi|228958243|ref|ZP_04119972.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228801452|gb|EEM48340.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 286

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 103/305 (33%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  I  L+  
Sbjct: 8   FVNGISTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYILALVGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 68  VAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKIFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +    L     F    +I   +  +V+L    +  +++L L++T I    R    +++
Sbjct: 116 PISAKLPLWLQGSFTFGGIILIKYRLFVILIGIIIYIALLLLLKKTKIGLIIRAGVMDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++   
Sbjct: 235 GSVQGSAIASLIVGLAGAFTAYF--------------IPDLSLAINMLMLLFFLIVKPTG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|320007620|gb|ADW02470.1| inner-membrane translocator [Streptomyces flavogriseus ATCC 33331]
          Length = 349

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/283 (11%), Positives = 87/283 (30%), Gaps = 13/283 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            + A    L   +   +      + ++        + A  +++++   G   L+  +   
Sbjct: 34  VVGAAAVFLFFAIVADSFLQASSLGTVLYAASTIGIMAAPVALLM-IGGEFDLSAGVMVT 92

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             A    +   +   ++W+ + VS +++   G   G    + +     I  L    +   
Sbjct: 93  SSALISSMFSYQMTANVWVGVFVSLLVTLGFGAFNGFMLTRTKLPSFIIT-LGTFLMLTG 151

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + +  + +G         +    +  +    +       +   I  +  L+ +     
Sbjct: 152 LNLGFTKLISGTVSTKTIGNMEGFESARKVFASYLTIGDVELKVTILWWAALVALATWIL 211

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                  RT   N    +     A  ++   ++  ++  +   +    ++G     S D 
Sbjct: 212 I------RTRFGNWIFAVGGEADAARAVGVPVVRTRIGLYLGVAFAAWVSGQHLLFSYDV 265

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIG 293
           +       +E I +I+ V     I GG  S    A    I   
Sbjct: 266 VQSGEGVGNELIYIIAAVIGGCLITGGYGSAIGSAVGAIIFGM 308


>gi|229133853|ref|ZP_04262676.1| Monosaccharide-transporting ATPase [Bacillus cereus BDRD-ST196]
 gi|228649554|gb|EEL05566.1| Monosaccharide-transporting ATPase [Bacillus cereus BDRD-ST196]
          Length = 316

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/295 (10%), Positives = 81/295 (27%), Gaps = 27/295 (9%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
            + +   +      +  +    +I V+ A G S V+     + ++      + A    +L
Sbjct: 16  FVGVMNPSFVQFSSLSLIMKSSVILVILAIGQSFVL-FTKNIDVSVGSIMGLSAAVCGML 74

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            +    +   +     + +    +     +       +    ++       +L       
Sbjct: 75  LTDGYSAFISIFVAIILGALIGMVNGIGVTKFRVPAIIMTLGMLGIIRGAMLLFTGGKWI 134

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                                      +     I  + +   +  +  +   +  +L + 
Sbjct: 135 ---------------------EDIPNEYKQISSIMMLGIPVTVWTVLIILLLLYFFLMKV 173

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
            I   +  + DN+     +   +   K+ AF +S    G+AG  F  +   +        
Sbjct: 174 QIGRYFYAVGDNEDGARLIGIHVDKVKIYAFIISGISAGLAGCIFVMNIGFVPNQTGTGI 233

Query: 265 ENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           E  ++ + V+      GG  S+   A     L  +      +    F +      
Sbjct: 234 ELQVIAAAVLGGIHLKGGTGSIFGAALGAFFLEVISSSLVFLKIPAFWNSAISGF 288


>gi|78188822|ref|YP_379160.1| branched-chain amino acid ABC transporter, permease protein
           [Chlorobium chlorochromatii CaD3]
 gi|78171021|gb|ABB28117.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Chlorobium chlorochromatii CaD3]
          Length = 289

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 92/305 (30%), Gaps = 25/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S  +   +Y +   G+S+V G + + +        +G Y      +  G+  ++ + +
Sbjct: 7   LISGVLTGGVYALAGIGMSLVFGVMNISNFAHGDLMMLGMYLAYFAFTLLGVDPFVSLVM 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              I+   G ++    +     +     ++++     I+     +               
Sbjct: 67  IIPIAFVFGYLLEKGFIHRVMHHPHQNQILLTVGLGLIMSNTALL----------AFTSD 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S        +  +   + +    L    ++ ++ L+L +T+   A R    N++
Sbjct: 117 PKILTTSYSSSAITLNEEISVSVPLLISFLITALITFTLYLFLSKTSTGMALRATSQNRE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +   +      AF + +A    AGA  A            F      I ++     
Sbjct: 177 AAQLMGINVAQMSGLAFGIGTALAATAGALIAPVYYIHPLAGHSFLLKAFTICVL----- 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                       L  VV    G         L      +     ++ +    V+L+R   
Sbjct: 232 ----------GGLGSVVGAGVGGVIIGVVESLSAAYISSDWKDVVVFVLFLAVLLLRPQG 281

Query: 339 LLRLR 343
           L   +
Sbjct: 282 LFGKK 286


>gi|30020069|ref|NP_831700.1| branched chain amino acid ABC transporter permease [Bacillus cereus
           ATCC 14579]
 gi|206970681|ref|ZP_03231633.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus AH1134]
 gi|218234908|ref|YP_002366651.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus B4264]
 gi|228920663|ref|ZP_04084006.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228939092|ref|ZP_04101688.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228952334|ref|ZP_04114422.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228971969|ref|ZP_04132588.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228978581|ref|ZP_04138955.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis Bt407]
 gi|229069505|ref|ZP_04202794.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus F65185]
 gi|229079137|ref|ZP_04211686.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus Rock4-2]
 gi|229127362|ref|ZP_04256358.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus BDRD-Cer4]
 gi|229144572|ref|ZP_04272975.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus BDRD-ST24]
 gi|229150190|ref|ZP_04278412.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus m1550]
 gi|229178361|ref|ZP_04305730.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus 172560W]
 gi|229190058|ref|ZP_04317064.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus ATCC 10876]
 gi|296502553|ref|YP_003664253.1| branched chain amino acid ABC transporter permease [Bacillus
           thuringiensis BMB171]
 gi|29895619|gb|AAP08901.1| Branched-chain amino acid transport system permease protein livH
           [Bacillus cereus ATCC 14579]
 gi|206734317|gb|EDZ51487.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus AH1134]
 gi|218162865|gb|ACK62857.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus B4264]
 gi|228593387|gb|EEK51200.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus ATCC 10876]
 gi|228605091|gb|EEK62543.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus 172560W]
 gi|228633309|gb|EEK89916.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus m1550]
 gi|228638985|gb|EEK95412.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus BDRD-ST24]
 gi|228656195|gb|EEL12037.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus BDRD-Cer4]
 gi|228704154|gb|EEL56591.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus Rock4-2]
 gi|228713644|gb|EEL65530.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus F65185]
 gi|228781131|gb|EEM29335.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis Bt407]
 gi|228787740|gb|EEM35700.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228807330|gb|EEM53861.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228820571|gb|EEM66600.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228838964|gb|EEM84262.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|296323605|gb|ADH06533.1| branched chain amino acid ABC transporter permease [Bacillus
           thuringiensis BMB171]
 gi|326939670|gb|AEA15566.1| branched chain amino acid ABC transporter permease [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 286

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 103/305 (33%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  I  L+  
Sbjct: 8   FVNGISTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYILALVGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 68  VAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKIFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +    L     F    +I   +  +V+L    +  +++L L++T I    R    +++
Sbjct: 116 PISAKLPLWLQGSFTFGGIILIKYRLFVILIGIIIYIALLLLLKKTKIGLMIRAGVMDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++   
Sbjct: 235 GSVQGSAIASLIVGLAGAFTAYF--------------IPDLSLAINMLMLLFFLIVKPTG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|46202224|ref|ZP_00053573.2| COG4177: ABC-type branched-chain amino acid transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 180

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 67/181 (37%), Gaps = 14/181 (7%)

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           + S+ R           ++  Y+V+L +   S ++   +R +    A + + D++ A   
Sbjct: 1   MLSIPRLPIVLGLDFGSKLGGYFVILTIVAASMAVYHLIRSSTYGLALKAMHDSEDATRV 60

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI-VILGGMTSL 281
           +       K    AVS+   G+ GAF A   + + PD     +   +  +  I GG  ++
Sbjct: 61  VGVNSTLLKAWMLAVSAFITGVVGAFNAHYINFLEPDYAFAGQWTTLAIVSAIFGGYRTV 120

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLR 341
           +       ++  V +L              F       H  ++ + L  +IL     L+ 
Sbjct: 121 TGPLLGALVVYLVDQL-------------AFKPILPQGHQIVLGVLLGAMILFSPGGLMP 167

Query: 342 L 342
           L
Sbjct: 168 L 168


>gi|46204049|ref|ZP_00209232.1| COG4177: ABC-type branched-chain amino acid transport system,
           permease component [Magnetospirillum magnetotacticum
           MS-1]
          Length = 133

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 33/89 (37%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +  T +  + +++ I  LI  +   GL++ +G  G  SL      A+GAY+   L S   
Sbjct: 40  IPLTATDYWYNAILIPFLIMALAGLGLNLTMGYAGQASLGTGAFMAVGAYATYNLLSAPA 99

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFR 118
            +     P   + S              R
Sbjct: 100 RTAAAGQPRGWLASSPERSGSSSACQSLR 128


>gi|308187397|ref|YP_003931528.1| ABC transport system, permease component [Pantoea vagans C9-1]
 gi|308057907|gb|ADO10079.1| putative ABC transport system, permease component [Pantoea vagans
           C9-1]
          Length = 344

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/319 (13%), Positives = 101/319 (31%), Gaps = 26/319 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + ++ V   L+  +F    + Q ++ +      + +Q+ I  + A G++ V+ + G + L
Sbjct: 32  IFVVMVGIALIFEMFGWYVRDQSFLLNTNRLILIVLQVAIIGIIAVGVTQVIITTG-IDL 90

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +              + +   +    L   S  +S     ++ +P++      + +  L 
Sbjct: 91  SSG-----------SVIALAAVVAASLAQTSDSLSPMYPSLVNMPAVIPIAAGIGVGLLA 139

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
            +     I     P      G+ V+ R      T  + I F     + +        + L
Sbjct: 140 GAVNGVLITRTGIPPFIATLGMMVSARGLAQYYTQGNPISFLSDGFTSIGQGAMPVVIFL 199

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +        + L+ T        I  N  +       +    +  + ++ A  G+AG  
Sbjct: 200 VVA---LLFHIALKHTRYGKYVYAIGGNMTSAKVSGINVNKYLIIVYTIAGALSGLAGVV 256

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            AA        M    E   + + VI     +GG+  ++       IL  +      +  
Sbjct: 257 LAARVSSGQSSMGMSYELDAIAAAVIGGSSLMGGVGRITGTLIGAVILGLIKSGFTFVGV 316

Query: 304 YYFNSLLKFDCSFNMRHTT 322
             +   +          + 
Sbjct: 317 DAYIQDIIKGVIIVAAVSI 335


>gi|225352776|ref|ZP_03743799.1| hypothetical protein BIFPSEUDO_04406 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156383|gb|EEG69952.1| hypothetical protein BIFPSEUDO_04406 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 341

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/320 (8%), Positives = 93/320 (29%), Gaps = 19/320 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             ++ ++  ++     G      ++ S+ I     ++ A  +++ V   G + L+     
Sbjct: 30  AVVIFILMIIMGQALFGTYLRLGFVSSLFIDHAYLIILAVAMTLPV-LTGGIDLSVGAIV 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           AI A   V L +    +   ++ +  +      +   L                M     
Sbjct: 89  AITAVVGVKLTNAGVAAPLAMVVMILIGVAFGLLTGTLI-----------EEFNMQPFIA 137

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           ++   +            A              +     +  +  ++++   ++    + 
Sbjct: 138 SLASMFLARGIASIISTKAQTFPENNNFDFISQKITIIDNPKISQDLYINVGVIIAALVV 197

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
               + L  T        I  ++ +   +   +   +   +  S+    +A   + A+  
Sbjct: 198 IFGYILLHHTRTGRTIYAIGGSRSSAELMGLPVKRTQYVIYLTSATLASIASIVYTANIR 257

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             S +       +  ++ V++GG                +  +   +     + L     
Sbjct: 258 S-SINTVGVGWELDAVASVVIGG------TIVTGGFGYVLGSVIGALVRSTIDPLTSDFG 310

Query: 315 SFNMRHTTLMVIALFLVILM 334
                 T ++ + + + +++
Sbjct: 311 VPAEWTTIVVGLMILIFVVL 330


>gi|304397325|ref|ZP_07379203.1| inner-membrane translocator [Pantoea sp. aB]
 gi|304354943|gb|EFM19312.1| inner-membrane translocator [Pantoea sp. aB]
          Length = 344

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/319 (13%), Positives = 100/319 (31%), Gaps = 26/319 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDS------MGIQILIYVMFAWGLSIVVGSLGLLSL 68
           + ++ V   L+  +F    + Q ++ +      + +Q+ I  + A G++ V+ + G + L
Sbjct: 32  IFVVMVGIALIFEMFGWYVRDQSFLLNTNRLILIVLQVAIIGIIAVGVTQVIITTG-IDL 90

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +              + +   +    L   S  +S     ++ +P++      + +  L 
Sbjct: 91  SSG-----------SVIALAAVVAASLAQTSDSLSPMYPSLVNMPAVIPIAAGIGVGLLA 139

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                  I     P      G+ V+ R      T  + I F     + +        + L
Sbjct: 140 GVVNGVLITRTGIPPFIATLGMMVSARGLAQYYTQGNPISFLSDGFTSIGQGAMPVVIFL 199

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +        + L+ T        I  N  +       +    +  + ++ A  G+AG  
Sbjct: 200 VVA---LLFHIALKHTRYGKYVYAIGGNMTSAKVSGINVNKYLIIVYTIAGALSGLAGVV 256

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
            AA        M    E   + + VI     +GG+  ++       IL  +      +  
Sbjct: 257 LAARVSSGQSSMGMSYELDAIAAAVIGGSSLMGGVGRITGTLIGAVILGLIKSGFTFVGV 316

Query: 304 YYFNSLLKFDCSFNMRHTT 322
             +   +          + 
Sbjct: 317 DAYIQDIIKGIIIVAAVSI 335


>gi|84514631|ref|ZP_01001995.1| branched-chain amino acid ABC transporter, permease protein
           [Loktanella vestfoldensis SKA53]
 gi|84511682|gb|EAQ08135.1| branched-chain amino acid ABC transporter, permease protein
           [Loktanella vestfoldensis SKA53]
          Length = 332

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/327 (11%), Positives = 99/327 (30%), Gaps = 33/327 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV---------------- 82
           + +  +  ++Y + A G  ++  + G+ +    +     A + V                
Sbjct: 12  VLNGLMAGVLYALVALGFVLIFKASGIFNFAQGVMALFAALTLVGIMEGQVPFAHLINAV 71

Query: 83  ----ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILI 138
               I    + +   L I ++ ++  A    +     +       I   + +      L 
Sbjct: 72  FGTNIHHFGWQVPAILAIFLTVLVMIAFAWAVQHFVFRHLVGQEPIILFMATIGLAYFLE 131

Query: 139 KWKPITNGKAGIYVADRLYFLGTTVRSLIR--FFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
               +  G +   +A  L   G+     +              +       L    L A 
Sbjct: 132 GVGDLMWGSSIRTLALGLPQGGSLWVEEMTNGLGGDDFYGFFIDKLDMVATLVALVLVAG 191

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++ + + T    A R + D+ +A  S+  ++ +  +  ++++     +AG  + A     
Sbjct: 192 LVAFAQYTKQGRAMRAVADDHQAALSVGISLSYIWVLVWSLAGIVALVAGVMWGAKSGVQ 251

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
                     +  + +++LGG TS+        I+    +L        +      +   
Sbjct: 252 FSLS---LIALKALPVLMLGGFTSIPGAIVGGMIIGVGEKLFEYTIGAPYLGGATENW-- 306

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLR 343
                    +   + ++ R   L   R
Sbjct: 307 ------FAYMLALVFLVFRPQGLFGER 327


>gi|330971013|gb|EGH71079.1| leucine/isoleucine/valine transporter permease subunit [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 164

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/68 (41%), Positives = 37/68 (54%)

Query: 21  VYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS 80
           +  L++  F+      +    +   ILIYVM   GL+IVVG  GLL L  V  YA+GAYS
Sbjct: 94  LAALIVLAFIWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 153

Query: 81  YVILGSRY 88
           Y +L   Y
Sbjct: 154 YALLSHYY 161


>gi|325283691|ref|YP_004256232.1| ABC-type transporter, integral membrane subunit [Deinococcus
           proteolyticus MRP]
 gi|324315500|gb|ADY26615.1| ABC-type transporter, integral membrane subunit [Deinococcus
           proteolyticus MRP]
          Length = 322

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 84/313 (26%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+     ++  L      +     ++  Q  +  + A+G++ V+   G + L+     
Sbjct: 23  LWLVFAALLVVASLLSDRFLTVPNFLNIARQTSVNALLAFGMTAVI-LKGGIDLSVGSIL 81

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+               I +L+  + +      ++              +        F 
Sbjct: 82  AVVG------------VIAVLLDQAGVPFAGTVLLSLAAGGLIGSLNGMMVAYGKIAPFI 129

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L            +     L  L  T ++            +  + +   +       
Sbjct: 130 VTLAALTIWRGVTLVMTDGSPLSRLSPTFQAF---------GNVSPLGVPSPVWLALGAL 180

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
            +    LRRT        +  ++ A       +   K+SA+A S     +A     +  +
Sbjct: 181 LATWFLLRRTGWGRGIYALGSSEDAARFAGLPVDRLKVSAYAFSGLMSALAALVLTSRLN 240

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P      E   + ++V+      GG   +        I+  +      ++   F   
Sbjct: 241 SAQPTAGTGFELDAIAAVVVGGTSLAGGRGGVIGTLLGALIIGVLNNAMNLLDVNAFYQQ 300

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 301 IVKGLVIVGALLF 313


>gi|325961550|ref|YP_004239456.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323467637|gb|ADX71322.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 338

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/321 (12%), Positives = 93/321 (28%), Gaps = 27/321 (8%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
             +  L+     +L  L      ++  I  +     +  +   G ++V+  LG L L+  
Sbjct: 13  YLVWILVLCCGAVLTGLSGRTFFTEGNITDLLTSTTVLGLVVVGQTLVI-LLGSLDLSVP 71

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
              ++ +     + +    +    I  + ++S A G+I GL     + +           
Sbjct: 72  FVLSLSSVLAAGVMAGRSENFTAGIVAAVLVSLAIGLINGLLVGLVKINGFIATLGTGLV 131

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
           +   +   ++  T   +                         +        + +  + M 
Sbjct: 132 VSGYLFTNYRGSTGKASPE---------------------LAAIGSASWGVVPWTTVAMV 170

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
               +  L+L RT        +  +               + A ++S  F G+AG    A
Sbjct: 171 LCLVATALFLNRTRTGLHIYAVGGDPAVTRMSGIRASLPAIVAHSLSGLFAGLAGLVIVA 230

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                SP++       ++    ++ G         A         L   + F   +SLL 
Sbjct: 231 RLGVGSPEVGTQGGYDLLSIAAVVVG-----GAVLAGGKGSIWGSLGGILIFATIDSLLG 285

Query: 312 FDCSFNMRHTTLMVIALFLVI 332
                      +  + + + +
Sbjct: 286 IMEVNPYLKEVVRGLIIIIAV 306


>gi|315426867|dbj|BAJ48488.1| branched-chain amino acid ABC transporter permease [Candidatus
           Caldiarchaeum subterraneum]
          Length = 292

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 98/318 (30%), Gaps = 29/318 (9%)

Query: 29  FLGATKSQKYIDSMGIQIL---IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
            LGA    + + ++   ++   +Y + A GL+++ G   L++        +  Y   +  
Sbjct: 1   MLGADFGVQLLQTILFGVMLGGVYALAAMGLALLFGVANLVNFAHGEYIMLAMYMAFVFS 60

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
                   L    +  +  A G+I  L   K       ++ +  +     +L        
Sbjct: 61  VTIFQDPVLTPLFNIPLFFAIGVITYLGIFKRLIKAPPLSQIAATVGILVLLRNLALAIW 120

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                                +    F    VI  +     +L        + L+L RT 
Sbjct: 121 AAEPKAPPY-----------TVFATSFNIGPVIVPLDKLLAMLVSLVTLLVLNLFLERTR 169

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +  A R   D+ +A   +        L    +S A +G++G+     +            
Sbjct: 170 LGVAMRASADDVEAVSLMGVDTNRLFLLTAGISLALVGLSGSLIMTYQAV--TPTSGLLF 227

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
            ++  +IV L G+ ++  I  A+ I      L  G+                     ++ 
Sbjct: 228 GLLTWAIVALAGLGTVKGILIASIIFGLADSLASGLWDPRG-------------REIVLY 274

Query: 326 IALFLVILMRSHSLLRLR 343
               L++ +R   L   R
Sbjct: 275 GLFILILWIRPKGLFGRR 292


>gi|308050733|ref|YP_003914299.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Ferrimonas balearica DSM 9799]
 gi|307632923|gb|ADN77225.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Ferrimonas balearica DSM 9799]
          Length = 297

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 91/306 (29%), Gaps = 22/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I  L+Y +      +V  S  +++        +GA+    L     L   +   +
Sbjct: 10  VINGLIVGLLYGVVGMCFVLVYKSTQIVNFAQGEFLLVGAWVCWALLVYLELPFLVGFLL 69

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           S       G+ + +  L+       I+ ++++               G A          
Sbjct: 70  SLAFMAVFGVALQMIVLRPMIGEPIISVIMVTIGLSIFFQSLVKWIFGVAPANYPPIFET 129

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                             +  E+      +   F+     L+ + +    A R    NQ+
Sbjct: 130 -----------QSVSIFGLNIELAYLLSTVIALFIMVGFYLFFKHSKHGLAMRATAFNQQ 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              SL  ++      ++ +++     AG                    I V   VILGG+
Sbjct: 179 VAQSLGISVKQVFAMSWGIAATVSATAGVVIGMVNGVSDSLS---VMGIKVFPAVILGGL 235

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        I+  +  L    +  YF+    +D +            L L++  + + 
Sbjct: 236 DSIVGAIVGGIIIGVLENLAEFFDSQYFHLGNMYDIAP--------FYVLLLILWFKPYG 287

Query: 339 LLRLRT 344
           L   R 
Sbjct: 288 LFGTRD 293


>gi|269119377|ref|YP_003307554.1| inner-membrane translocator [Sebaldella termitidis ATCC 33386]
 gi|268613255|gb|ACZ07623.1| inner-membrane translocator [Sebaldella termitidis ATCC 33386]
          Length = 301

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 92/290 (31%), Gaps = 8/290 (2%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             I ++  QILI +  A     +    G+++L       IGA+           + ++ I
Sbjct: 6   SNILAITFQILIPIALAAIAGTISERSGVINLGLEGMMLIGAFGGAYGS-FISGNPYVGI 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
             S +I    G +     L  +     +   I            K I   +    +   +
Sbjct: 65  VFSVIICSVMGFLHAYFCLALKAHQSVVGVGINIFAGGITATLLKIIWQNEGQSPIVKSV 124

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
             +   V + I   R         ++   ++    ++         +T +    R I D+
Sbjct: 125 PNVTIPVLNKIPVLRVLFENQSVYLYFTIIIAVFSYIVIY------KTKVGLRLRAIGDH 178

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            K   +    +   +  A  +S A  G+AG++ + S + +           + ++  I G
Sbjct: 179 PKTAQTSGINVNKYRYIAVTISGAIAGLAGSYLSISLNNLFVKDMTAGRGFMGLAANIFG 238

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
           G  +      A+ +      L   +      S       + +    L+VI
Sbjct: 239 GW-NPLGSLIASFVFSVAQALRFYLTGLNIPSYFIEMIPYLVTLVVLVVI 287


>gi|295835768|ref|ZP_06822701.1| sugar ABC-type transport system, permease component [Streptomyces
           sp. SPB74]
 gi|197700008|gb|EDY46941.1| sugar ABC-type transport system, permease component [Streptomyces
           sp. SPB74]
          Length = 344

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 98/320 (30%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L + +    + A+   +   L   +      + +M        + A  +++++   G   
Sbjct: 21  LRRPELGSIVGAIAVFVFFALVADSFLKPASLATMLYAASTIGIMAVPVALLM-IGGDFD 79

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +     A    +   +   + W+ + VS +++ A G   G    + +     I   
Sbjct: 80  LSAGVMVTTSALVSTMFSFQLTANTWVGVGVSLVVTLALGFFNGYLRQRTKLPSFIITLG 139

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               +    L   K I+ G +   ++D   F                 F +  ++ + ++
Sbjct: 140 TFLMLTGLNLGLTKAISGGVSTKSISDMEGFSSAHALFASTLTLGGVDFKVTILWWFGLI 199

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
                  A     L RT   N    +  ++ A  ++   +   ++  +   +    ++G 
Sbjct: 200 -------ALGTWILLRTRAGNWIFAVGGDEDAARAVGVPVTRTRVGLYLGVAFGAWISGQ 252

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
               S D++       +E I +++ V     I GG  S    A    I     +      
Sbjct: 253 HLLFSFDQVQSGEGVGNEFIYIVAAVIGGCLITGGYGSAIGAAVGALIFGMTSKGIVYAE 312

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
           +              +    
Sbjct: 313 WNADWFKFFLGAMLLLATLL 332


>gi|327462752|gb|EGF09074.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Streptococcus sanguinis SK1057]
          Length = 327

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 48/330 (14%), Positives = 110/330 (33%), Gaps = 26/330 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLG----ATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           ++L K   +  L+A++  +++F F      + +S   + S+          A G++ V+ 
Sbjct: 9   MKLEKTVGLQKLIALIALVVIFAFFAISSESFRSFDTVVSILDASYYIGFLAIGVTFVI- 67

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G + L+        A    +L ++ G  +WL +    +I G  G++ G+   KF    
Sbjct: 68  ITGGIDLSIGTVMMCSAIIGGVLHTKMGWPLWLSLLAILVIGGLFGLLNGIMVAKFGLPP 127

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                           +    I+ G + I    +             +     +   +  
Sbjct: 128 FIAT------------LGTMMISRGLSSIVSNVQSVTFPLRGTGEGWYKDLFRTQDNFPT 175

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +    + +  ++    + L +T I      I  N++A       ++  +  A+ +    
Sbjct: 176 GL----IVLVLVAVLAAVVLNKTKIGRYIFAIGSNKEATRLSGVNVVKWEGMAYVIGGLS 231

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+A   +AA+   I P      E   +  +V+      GG+ S+        I+  +  
Sbjct: 232 AGLAAVAYAATYSTILPGTGNGMELDAIAGVVVGGTSLAGGVGSVIGTIIGVFIMSVLKI 291

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
               ++      L        +     + I
Sbjct: 292 GLPYIDLQPHYQLFITGFVVIVAVYFDIFI 321


>gi|324325994|gb|ADY21254.1| branched-chain amino acid ABC transporter permease [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 286

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 103/305 (33%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  +  LI  
Sbjct: 8   FVNGISTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYVLALIGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 68  IAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKVFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L     F    VI   +  +V+L    +  +++L L++T I    R    +++
Sbjct: 116 PIGAKLPLWLQGSFTFGGVILIKYRLFVILIGIIIYIALLLLLKKTKIGLMIRAGVMDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++ + 
Sbjct: 235 GSVQGSAIASLIVGLAGAFTAYF--------------IPDLSLAINMLMLLFFLIVKPNG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|260460426|ref|ZP_05808677.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
 gi|259033531|gb|EEW34791.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
          Length = 322

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/309 (10%), Positives = 80/309 (25%), Gaps = 39/309 (12%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            +  S   I ++  Q  +  + A G + V+   G + L+             +L +    
Sbjct: 39  SSFASANNISNLLRQGSMIAILAVGQTFVI-ITGGIDLSVGAVVGFATVIAAMLINAGIP 97

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
               ++    +                   ++     + S     +L+            
Sbjct: 98  VFLAILITLLVGVAIGLFHGFGIVKMGLPPFIITLATLTSLRGIGLLMTNGN-------- 149

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                      ++ +        +SF+      + V+L        +      +      
Sbjct: 150 ---------SISINNDAFQVFSRNSFLGVPNLFWMVILVGIPAYVFLH----HSRWGRYL 196

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
            ++  N +A       +      A+ +S       G   A+     +P   +  E   + 
Sbjct: 197 FSVGSNAEASRLSGVNVQRTIYMAYTLSGLCAAFVGVLLASRIGIGNPTQAEGWELQAIA 256

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
           S VI      G + S+        IL  +      +N   F                +  
Sbjct: 257 SSVIGGTSLFGAVGSVHGPLLGAFILATINNGANLLNVNAF------------WQRIITG 304

Query: 326 IALFLVILM 334
           + + +++  
Sbjct: 305 VLIIVIVYF 313


>gi|320537850|ref|ZP_08037766.1| amino acid or sugar ABC transport system, permease protein
           [Treponema phagedenis F0421]
 gi|320145307|gb|EFW37007.1| amino acid or sugar ABC transport system, permease protein
           [Treponema phagedenis F0421]
          Length = 330

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 92/305 (30%), Gaps = 16/305 (5%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           ++ + +  + +  ++  +L+ L  G   S   +  +   ++I  MF+   +++V   G  
Sbjct: 10  KILRTEFFVFIAIIILSILIQLRSGQFFSNNNLVDLVRAVIIPAMFSIA-AMIVLVSGGT 68

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            ++     ++  Y       RY  ++ +L  + A I    G + G             A 
Sbjct: 69  DVSAPSIASLAMYLVSKWMLRYEGNVIVLFLIGAGIGIILGCLNGYLI----------AR 118

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
                +   +          +      +             + F   ++    +  M   
Sbjct: 119 FQFPTLIVTLGTASLYTGLLQGVFAAHEHPVPAPMHALGKAKLFSVENAVSGLKSNMPVT 178

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +  +  L   +   L++T +      I  +  +       +   ++  +       G+ G
Sbjct: 179 IFLLIALVILVWFILQKTMLGRGIYAIGGDVISAQRAGFNVFQIQMFIYIFVGMIAGITG 238

Query: 247 AFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
              A+      P      E   + S V     + GG  S++       ++  +      +
Sbjct: 239 VARASMMMNCQPTNLNGMEMTAIASCVLGGTSVQGGAGSITGTILGVLLITIISNSLLLL 298

Query: 302 NFYYF 306
               F
Sbjct: 299 GISTF 303


>gi|300785865|ref|YP_003766156.1| sugar ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299795379|gb|ADJ45754.1| permease component of ABC-type sugar transport system
           [Amycolatopsis mediterranei U32]
          Length = 332

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/320 (11%), Positives = 87/320 (27%), Gaps = 27/320 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +  +L V+  +  F       ++  I ++        + + G++ V+   G + L+
Sbjct: 26  RLLGLAGVLVVLCLVGQFTRPELFFTESNISTILRLAAAIGVVSVGMTFVI-ISGGIDLS 84

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +    ++   +      W+++     +   CG++ G+     +      ATL M
Sbjct: 85  VGSMVGLAG-VWLTTLATQSYGPWVMVLCGLAVGLGCGLVNGVLVAYGKVVPFI-ATLAM 142

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
               + +  +                       V        F   F+     ++   L 
Sbjct: 143 YVSARGLAERISG---------------RRTQVVADQDFLAFFRGGFLGIPTLIWLFALV 187

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
                  +     RT        +  N +A       +       + V+    G+A    
Sbjct: 188 FAVGWVVL----NRTTFGRRTYAVGGNIEASRLAGINVKRHLALVYGVAGLCCGIAALMV 243

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGMT-----SLSKIAKATAILIGVVELCCGMNFY 304
            A     +     F E   + ++VI G +      SL        I   +  +    N  
Sbjct: 244 VARTTAGASTNGMFYELDAIAAVVIGGTLLTGGRGSLIGTLVGVLIFTVLSNIFTLNNLD 303

Query: 305 YFNSLLKFDCSFNMRHTTLM 324
                +       +      
Sbjct: 304 TDIQNIAKGVIIVLAVLLQF 323


>gi|297529924|ref|YP_003671199.1| inner-membrane translocator [Geobacillus sp. C56-T3]
 gi|297253176|gb|ADI26622.1| inner-membrane translocator [Geobacillus sp. C56-T3]
          Length = 407

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/350 (11%), Positives = 98/350 (28%), Gaps = 55/350 (15%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  L ++  L   L  G       I ++ +Q    ++ A G+ +V+   G + L+
Sbjct: 33  RSYSMVIALVLIMLLFQVLTGGILLRPLNITNLILQNSYILVLAVGMMLVI-ITGHIDLS 91

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD--------- 120
                A       IL  ++  S+WL + +  ++    G   G      +           
Sbjct: 92  VGSVAAFVGALAGILMVQHHASVWLTVLICLLLGALIGAWQGFWVAYVKIPSFIVTLAGM 151

Query: 121 ----------------------------------------YLAIATLIMSEIFQNILIKW 140
                                                   +L    +  +     ++++W
Sbjct: 152 LLFRGLTMVILEGQSIAPFPKTFQNMSSGFLPDVFHGGEIHLFTIVIGFAASLLFVVLEW 211

Query: 141 KPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILW 200
           +   + K   +           +  +       +  +     +  +L+ +  L  +    
Sbjct: 212 RKRNSQKKYGFAVTPAAMFALKLAVIAAVIMIFTYILATYEGIPTILVILAALIMAYSFV 271

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
             RT +      I  N+KA               F        ++G  FAA  +  +P  
Sbjct: 272 ANRTVVGRHIYAIGGNEKAAQLSGIKTKRVTFWVFVNMGVLAALSGLIFAARLNAATPKA 331

Query: 261 FKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
               E   + +  I      GG+ ++S       ++  +      +    
Sbjct: 332 GNLFELDAIAACFIGGASAYGGIGTISGAIIGGLVMGVMNNGMSLLGLGI 381


>gi|222084285|ref|YP_002542814.1| ribose ABC transporter [Agrobacterium radiobacter K84]
 gi|221721733|gb|ACM24889.1| ribose ABC transporter [Agrobacterium radiobacter K84]
          Length = 324

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 46/321 (14%), Positives = 99/321 (30%), Gaps = 23/321 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R +    I  +  V+  +      G   +   I ++        + + G+++V+G  G 
Sbjct: 10  IRRHSELGIFLIGLVLVVIFSATSDGNWANLYNIGTILQVTATLGLMSLGVALVIG-TGE 68

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + ++    + +GA +Y+ L +R      + +  + ++  A G+I GL   +     L I 
Sbjct: 69  IDISVGSTFGMGALAYLWLAARVD--PSVAVMAAILVGSAIGLINGLLVTRTGTPSLIIT 126

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L            +             +           F+ +    Y+
Sbjct: 127 -----------LGTLMIFRGIAIALTEGFSFSIPYAARKGWTYVVLGGGDFLNFNTAFYW 175

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +++ +  L   +    +     N    +  + ++  S    +   KLSAF +        
Sbjct: 176 LIVVLVVLWVML----KAMPFGNRLLAVGGSAESAHSRGVRVDRIKLSAFVLCGMLAAFG 231

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCG 300
           GA  A         M +  E   + S V     + GG  SL        +L  +      
Sbjct: 232 GALEAGKLGFADGSMGRLMELQAIASCVLGGCLLAGGRISLIGALMGAFVLSSIQSYLVV 291

Query: 301 MNFYYFNSLLKFDCSFNMRHT 321
           M       +L       +   
Sbjct: 292 MGVQPQWFILILGMIVVLAAY 312


>gi|325957214|ref|YP_004292626.1| sugar ABC transporter permease [Lactobacillus acidophilus 30SC]
 gi|325333779|gb|ADZ07687.1| sugar ABC transporter permease protein [Lactobacillus acidophilus
           30SC]
 gi|327183934|gb|AEA32381.1| sugar ABC transporter permease protein [Lactobacillus amylovorus
           GRL 1118]
          Length = 318

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 74/270 (27%), Gaps = 2/270 (0%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G++++       +GA++ +I    +  +     P    + GA   ++      F    L
Sbjct: 34  SGIVNIGLEGIMTVGAFTSIIFNLTFAKTFGSATPWLGALVGAIFGLIFSILHAFATINL 93

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
               +I   +   +                             +    + P    I+   
Sbjct: 94  HADHIISGTVLNLLAPPLGVFLIKAIYEKGQTPNITANFGYADIPVLAQIPVIGKIFFTN 153

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
                     L+  +   L +T +    R+  +N +A  +L   +   +      S    
Sbjct: 154 TSAPAWLAIILTIILWFVLYKTKLGLRLRSTGENPQAADTLGINVYKMRYIGVLTSGLMA 213

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+ GA FA S            +  + ++ VI  G  +      ++            + 
Sbjct: 214 GLGGAVFAQSISGNFSISTIVGQGFMALAAVIF-GKWNPVGAMLSSLFFGFAQS-LSIIG 271

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
                          +    + ++ L L +
Sbjct: 272 NQLPGIAKIPTVYMQIAPYVITILVLVLFL 301


>gi|76810062|ref|YP_333416.1| membrane protein component of ABC ribose transporter [Burkholderia
           pseudomallei 1710b]
 gi|254188707|ref|ZP_04895218.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254258824|ref|ZP_04949878.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
 gi|76579515|gb|ABA48990.1| membrane protein component of ABC ribose transporter [Burkholderia
           pseudomallei 1710b]
 gi|157936386|gb|EDO92056.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254217513|gb|EET06897.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
          Length = 337

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 85/295 (28%), Gaps = 27/295 (9%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             +     ++  QI   V+ + G++ V+   G + L+     A+ A    +   R     
Sbjct: 55  FLTYDTFSTIANQIPDLVVLSVGMTFVLIIAG-IDLSVGSVLALAASVVSVAALRGQWPP 113

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
                     + A G + G  ++ +R       +L + E  + +  +         G   
Sbjct: 114 LPAALAGVAAAAATGTLTGAVTVGWRIPSFI-VSLGVLEAARGVAYQLTNSRTAYIGDA- 171

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                              F        + +    L    +       L RT        
Sbjct: 172 -------------------FDFLSNPIALGISPAFLIAVAVMIVAQFVLARTVFGRYLVG 212

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N++A           K+  FA+  A  G+A  F  +  +   P+     E  ++ ++
Sbjct: 213 IGTNEEAVRLAGVNPRPYKIIVFALMGALAGLAALFQISRLEAADPNAGAGLELQVIAAV 272

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI     +GG  S+       +I+  +      +        +       +    
Sbjct: 273 VIGGTSLMGGRGSVVSTFFGVSIISVLAAGLAQIGANEPTKRIITGAVIVVAVVL 327


>gi|325263616|ref|ZP_08130350.1| ABC transporter, membrane spanning protein [Clostridium sp. D5]
 gi|324031325|gb|EGB92606.1| ABC transporter, membrane spanning protein [Clostridium sp. D5]
          Length = 324

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/314 (11%), Positives = 98/314 (31%), Gaps = 23/314 (7%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
              +  +L ++Y     +  G       I S           + G++ V+   G +  + 
Sbjct: 17  RVVLCFVLILLYGFFCAMTQGEFAGISRILSALNYAYFLGFLSLGVTFVIA-TGGIDFSI 75

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                  A         YG+ + L++ +S ++    G+  G     +       +   M+
Sbjct: 76  GPVMFCCALVSGFSLITYGVPMPLVMVISILVGLCFGIFNGYLVAYWSVPSFITSMASMN 135

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                            +       + +  ++       +      +   +F++ V+  +
Sbjct: 136 IA-----------KGLASVFTKTQSVSWPQSSAEGGWYRYLVKMGDIPIGLFIFLVVAVV 184

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
           C +         +T +     ++  N++A       +   +++A+ +    +G+   F+ 
Sbjct: 185 CAIIL------NKTKMGRYILSLGSNKEAVRLSGVNVKKWEMTAYIICGVLVGIGALFYV 238

Query: 251 ASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           ++   + P       N  +   V+      GG+ S+S       I+  + E    + F  
Sbjct: 239 SAYTTVQPGYGDQYNNEAIAGCVMGGTSMAGGLASISGTVIGVFIIALLQEGILALGFSK 298

Query: 306 FNSLLKFDCSFNMR 319
              L+       + 
Sbjct: 299 DYQLIITGIIVIVA 312


>gi|302524869|ref|ZP_07277211.1| ribose ABC transporter [Streptomyces sp. AA4]
 gi|302433764|gb|EFL05580.1| ribose ABC transporter [Streptomyces sp. AA4]
          Length = 347

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/315 (9%), Positives = 77/315 (24%), Gaps = 15/315 (4%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I  +L  +  +   L  G   +      +  +  + ++ + G++ V+ + G + L+   
Sbjct: 32  WISLVLVALIVVFTVLAPGQFATVFTFQMLLNETSVLLVLSVGMTFVIITSG-IDLSVGS 90

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
                                       + +G    ++          +L          
Sbjct: 91  VLIFAGMVAGKTMEALSGGNASQAGWGVITAGLVAAVLAGTLWGLINGFLIAVA------ 144

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
               +                  L   G+ V S+         +      +  ++L    
Sbjct: 145 ---GIPPLIVTLGTMGAALGVAYLLNNGSDVNSMPAELNRVLGYGTSFGGIPNLVLVAVA 201

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           ++      L  T        +  N +A       +    L  + ++    G+AG    A 
Sbjct: 202 ITLIGAWLLHTTRFGRYTFAVGSNAEAARRSGIGVTAHLLKVYLLTGFLAGLAGFLSLAF 261

Query: 253 RDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
               +           + + V+      GG+ S+        I   + +     +   + 
Sbjct: 262 YTSTTISAHATDNLNSISATVMGGTSLFGGVGSMLGTVIGVFIPAVLKKGFNITHVQDYW 321

Query: 308 SLLKFDCSFNMRHTT 322
             +            
Sbjct: 322 QQIAVGAVLIAAVWF 336


>gi|227501096|ref|ZP_03931145.1| galactoside ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus tetradius ATCC 35098]
 gi|227216681|gb|EEI82082.1| galactoside ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus tetradius ATCC 35098]
          Length = 343

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/279 (9%), Positives = 75/279 (26%), Gaps = 10/279 (3%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRYG 89
              + + I ++  Q    +  A G   ++   G   L+        A      +    + 
Sbjct: 38  FITNPRNIINILSQTSTRLFIALGTGGLLILAG-TDLSAGRIVGFTAAIAGALLQSPGFA 96

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
              +  I   +++ G    +           +      + + I    +            
Sbjct: 97  QKFFPNIQKPSLLLGLLAAVAIGAVCGAFNGFGVAYLKLHAFITSLGVQLAIFGILQLFI 156

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
                    +G          R   +     +   Y+++     S  +     +T +   
Sbjct: 157 ASNPYGPQPIGGFDEKYANVVRGGFTIPGSNLQFPYLIIYAVIASIIMWFIWNKTVLGKN 216

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              +  N +A       +    +  F +S    G++G         ++      + ++  
Sbjct: 217 MFAVGGNPEAAEVSGINVTKTIMIVFIISGIMYGLSGFLEGPRLGSVTTTT-GEAYDLDA 275

Query: 270 ISIVIL------GGMTSLSKIAKATAILIGVVELCCGMN 302
           I   ++      GG+ ++  I   + IL  +      + 
Sbjct: 276 IEACLIGGVSFSGGIGTIPGIVLGSIILQVINYGLLYIG 314


>gi|302339934|ref|YP_003805140.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
 gi|301637119|gb|ADK82546.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
          Length = 323

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/315 (10%), Positives = 93/315 (29%), Gaps = 28/315 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L+ +   +++        + + + ++  Q     + A G++  +   G + ++     A
Sbjct: 21  VLILLAMMIIMTFLKPGFLTVRNLTNILRQQTPVAIMAIGVAFTI-ISGGIDISGGSVIA 79

Query: 76  IGAYSYVILG---SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
           + A          S       ++  ++ +++G+    +   S+ +      IATL M   
Sbjct: 80  MSAVILAKFAQVNSTGTFYPIIVPIIAGILTGSLAGAVTGISVSYGKIPPFIATLGMMSA 139

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            + + +                                 F        + +  ++  +  
Sbjct: 140 ARGVALIVSKGR-------------------PITGFSSSFDFIGGGDFLGIPILVFILIV 180

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
                 + L +T        I  +Q A       +   K+  + +S  F G+A    A+ 
Sbjct: 181 AYIIGYIILHKTKFGTYIFAIGSSQVAAEVSGVNVKKTKILIYTLSGLFTGIAAILVASR 240

Query: 253 RDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
                P +    E   + ++V+      GG+ +         I+  +      +     +
Sbjct: 241 TLSGQPGVGSGWEMQAITAVVLGGASFSGGIGTAIGTLIGALIMGVLTNSMTMLQIDPAS 300

Query: 308 SLLKFDCSFNMRHTT 322
            ++       +    
Sbjct: 301 QMVVRGAVIVLAVLL 315


>gi|91777516|ref|YP_552724.1| ABC D-xylose transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91690176|gb|ABE33374.1| xylose ABC transporter membrane protein [Burkholderia xenovorans
           LB400]
          Length = 399

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 44/359 (12%), Positives = 94/359 (26%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   +L  +A ++     L  GA  + + + ++  Q+ I  M A G+  V+   G + L+
Sbjct: 33  KILALLIAVAAIWIFFSVLTHGAFVTPRNLSNLLRQMSITGMLACGMVFVI-IAGEIDLS 91

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI----- 124
                 +      IL       + + +PV  ++    GM  G  S   R     +     
Sbjct: 92  VGSLLGLLGGVAAILDVNRHWPLAVTLPVVMLLGVLIGMFNGWWSTYRRVPSFIVGLGGM 151

Query: 125 ------------------------------------ATLIMSEIFQNILIKWKPITNGKA 148
                                                TL +        +  +   N + 
Sbjct: 152 LAYRGILLGVTGGSTIAPVSDGFVFVGQGYLPRLAGDTLAVVLFVLLAFLTIRQRRNRER 211

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                  ++     V           + +     +   +L +  L         +T    
Sbjct: 212 YQLRVVPVWQDVVKVVGAGVILAGFVATLDRYGGIPVPVLLLLALLGIFTWIATQTVFGR 271

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               +  N +A           KL+ FA+        G    A     SP      E   
Sbjct: 272 RIYAVGSNLEATRLSGVNTNRVKLAIFALMGLMCAFGGIVNTARLAAGSPSAGSMGELDA 331

Query: 269 VISIVILG-----GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + +  I G     G  ++        ++  +      ++   +  ++       +    
Sbjct: 332 IAACFIGGTSMRGGSGTVYGALIGALVMASLDNGMSMLDVDAYWQMIVKGSILVLAVWI 390


>gi|86358764|ref|YP_470656.1| xylose ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86282866|gb|ABC91929.1| xylose ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 403

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/349 (11%), Positives = 83/349 (23%), Gaps = 61/349 (17%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +   L  +     F   G       + ++ +Q    V+ A G+ ++V   G + L+
Sbjct: 26  REYGMFIALIAIMVFFQFSTGGVLFRPLNLTNIILQNSFIVIMALGM-LLVIVAGHIDLS 84

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                        ++  ++ ++  L   V   +    G + G      +     +    M
Sbjct: 85  VGSVVGFIGAIAGVMTVQWHVNYVLAGVVCLALGALVGGLQGYFVAYHKIPSFIVTLAGM 144

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                  L        G +          +       +      +S  I    +  V L 
Sbjct: 145 LVFRGLTLFVMTASGTGTSIGPFPPEFQLISIGFLPNLIDMGGINSTSIILTVVGAVTLF 204

Query: 190 MCFLS-----------------------------------------------------AS 196
                                                                     A+
Sbjct: 205 YMAWRKRLSNERHGNDVEPMGFFLAQNLIVAAAVLALGIQLSVYRGFPNVLVVMLVLVAA 264

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
                RRT I      +  N+KA               FA      G+AG   A   +  
Sbjct: 265 YAFITRRTTIGRRIYAMGGNEKATKLSGINTERLTFLTFANMGLLAGLAGLIVALRLNSA 324

Query: 257 SPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCC 299
           +     F   + VI+   +      GG+  ++       I+  +     
Sbjct: 325 TAKG-GFGLELDVIAACFIGGASAQGGVGKVTGAVIGALIMGIMNNGMS 372


>gi|108803245|ref|YP_643182.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
 gi|108764488|gb|ABG03370.1| inner-membrane translocator [Rubrobacter xylanophilus DSM 9941]
          Length = 315

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 77/267 (28%), Gaps = 25/267 (9%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL-LSLNCVIAYAIGAYSYVILGS 86
           L      S     ++        + A G ++V+ S G  + L+      +GA     LG+
Sbjct: 25  LLQPGFGSYDQAMNILRLAAFLGIVAAGQTLVIISGGEGIDLSVGAVVTLGAILVFRLGT 84

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
                  L + ++  +    G   GL     +   L +                     G
Sbjct: 85  GEAGGALLALAIALGVGLLIGAANGLGITLLKIPPLVMTL-------------------G 125

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
            AG+     L      +R                  +  V+L    L   + L L RT  
Sbjct: 126 MAGVVQGLILVVTRGELRGETPDLLAGLVSGSLAFGIPGVVLVWAALGLLMWLLLWRTPY 185

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                 +  N+         +    ++ +A+S     + GA       ++  ++      
Sbjct: 186 GRQLFAVGANRTTARLSGVRVPAVVVATYALSGMLAALGGAILLGYTRQVFLNLGDPYTL 245

Query: 267 IIVISIVI-----LGGMTSLSKIAKAT 288
             V ++V+      GG+ S +      
Sbjct: 246 PSVAAVVVGGTLLAGGVGSYAGTMAGA 272


>gi|302522407|ref|ZP_07274749.1| ABC transporter permease [Streptomyces sp. SPB78]
 gi|302431302|gb|EFL03118.1| ABC transporter permease [Streptomyces sp. SPB78]
          Length = 347

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 43/318 (13%), Positives = 95/318 (29%), Gaps = 27/318 (8%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           ++D  +  L VV  L  F F+    +   +  +    L   + A  ++++V   G + L+
Sbjct: 27  RWDTAVGTLLVVLLLSSFSFVDNFGNALNLSFLIGNTLPIALIALPMTMLV-VSGEVDLS 85

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +       L +            + +       ++           L + +L +
Sbjct: 86  VGSTVGLSGAVMGALWNHGM------AIETIIPLCVLLGVVCGLVNGLLVTRLGLPSLAV 139

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
           +            I  G   +      Y                 +    E F+ Y  + 
Sbjct: 140 TIGTMAAYRGIAQIVLGSDSVTDFPSPYLDF-------------GAGRFCETFLPYAAVP 186

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
              L    ++ L  T +  +   I  N++A       +   +LS F  +     + G F+
Sbjct: 187 FLVLLVLAVVVLHATRVGRSLFAIGANEEAARFAGVRVKRLRLSMFVTTGVLSALTGVFW 246

Query: 250 AASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNF 303
           A        D       + VI+ V+LGG+       +L        +L  +  +   +N 
Sbjct: 247 ALHYASARYDNAT-GLELSVIAAVLLGGIDFDGGRGTLGGAIAGVFLLGTLQNVMSLLNV 305

Query: 304 YYFNSLLKFDCSFNMRHT 321
              + ++       +   
Sbjct: 306 SAQSQIVVTGVLLVVSVL 323


>gi|163792683|ref|ZP_02186660.1| inner-membrane translocator [alpha proteobacterium BAL199]
 gi|159182388|gb|EDP66897.1| inner-membrane translocator [alpha proteobacterium BAL199]
          Length = 290

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/300 (9%), Positives = 80/300 (26%), Gaps = 27/300 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                IY   A  + ++  ++   +           +    L           +    + 
Sbjct: 12  LATGAIYAAVALAVVMIFLAIDHFNFAQGEMAMFSTFICWALIDAGLPYWVAFVLTIGIS 71

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                 I  +         +    +    +F  +      I +       +       + 
Sbjct: 72  FAGGIAIERILFRPLHAAPVLSHIIAFLGLFFILNNGAGWIWDFTIKPMASPFPEGSISG 131

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           +                      ++  +  + A + L+ R T++  A R    N ++   
Sbjct: 132 LIGYHEIG---------------MIGIVLIMLALLYLFFRYTSVGLAMRAAAQNPESAKL 176

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
              ++ +     + ++SA   + G   A         M          +  I+GG+T+ +
Sbjct: 177 CGISVGWMIALGWGMASAIGAVGGILIAPVVFLEPNMMLGILLYG--FAAAIVGGITNPA 234

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  ++  +  L      +            +    T+ ++ +  V++++   L   
Sbjct: 235 GAVAGGFMVGVLENLVGTYIPFVG----------SELKLTVALVLIISVLMVKPSGLFGR 284


>gi|114705151|ref|ZP_01438059.1| ABC transporter, membrane spanning protein (sugar) [Fulvimarina
           pelagi HTCC2506]
 gi|114539936|gb|EAU43056.1| ABC transporter, membrane spanning protein (sugar) [Fulvimarina
           pelagi HTCC2506]
          Length = 403

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 48/354 (13%), Positives = 90/354 (25%), Gaps = 57/354 (16%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           F  R  +   IL  L V+         G       + ++ +Q    V+ A G+ ++V   
Sbjct: 23  FLRRHMREYGILIALVVIMAFFQIATDGILMKPINLTNLVLQNSYIVIMALGM-LLVIVS 81

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+             ++  ++ ++  +   +   + G  G   G     ++     
Sbjct: 82  GHIDLSVGSVLGFVGALAAVMIVQWDMNFLVASIICLAVGGLIGAAQGYWVAYWKIPSFI 141

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           +    M       L      + G                V  +  F              
Sbjct: 142 VTLAGMLVFKGLTLWLLAGQSVGPFPGGFQLLASGFLPDVIDVRGFHLVSFVLGAGVAAF 201

Query: 184 YY-------------------------------------------------VLLGMCFLS 194
                                                              VL+ M  L 
Sbjct: 202 ILGLALKHRFSTRGSGHSDEPFSFFMAKNVLIAVAILYLTWLLSSFRGFPNVLIVMAVLI 261

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A+      RT I      I  N+KA               FA       +AG  FAA  +
Sbjct: 262 AAYSFVTSRTTIGRRIYAIGGNEKAAKLSGINTERLTFLTFANMGMLAALAGLVFAARLN 321

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMN 302
             +P     +  + VI+ V +      GG+ ++        I+  +      + 
Sbjct: 322 TATPKA-GLAFELDVIAAVFIGGASMAGGVGTIVGAVIGAFIMGVMNNGMSILG 374


>gi|225388079|ref|ZP_03757803.1| hypothetical protein CLOSTASPAR_01813 [Clostridium asparagiforme
           DSM 15981]
 gi|225045841|gb|EEG56087.1| hypothetical protein CLOSTASPAR_01813 [Clostridium asparagiforme
           DSM 15981]
          Length = 322

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/285 (9%), Positives = 81/285 (28%), Gaps = 27/285 (9%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             + ++     + ++ + G+++ +   G ++++     ++      I   R       ++
Sbjct: 35  YNMQNLLKDCSLLIIVSLGMNLAI-MSGKINISVGAVMSLCGVITGIQLQRGMNIGLAIL 93

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
                      +   + +      Y   +  +++  F  I      + +           
Sbjct: 94  IGLLAGLVLGLVCGYMIA------YQNFSDWVVTYAFMGIAQGLALVASDGN-------- 139

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                          F          +Y +++    L   ++    RT       +I  +
Sbjct: 140 -------TIPGFSNAFRFIATGKIFGIYTMIIIAALLCLLLVWLSTRTKFGYDVYSIGGS 192

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL- 275
           Q++       +    L  F ++     ++G   AA  +  SP   +  E   + +++I  
Sbjct: 193 QQSARLAGINVKRNLLWIFIITDLLAAVSGILLAAKSNSASPIGGQGYEWDAIAAVLIGG 252

Query: 276 ----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
               GG   +S       ++  +      +    +          
Sbjct: 253 TPFDGGKGKVSGCIIGAVLMRTLRNGLTMIGLSPYWQTFIIGAVV 297


>gi|270264179|ref|ZP_06192446.1| transporter [Serratia odorifera 4Rx13]
 gi|270041828|gb|EFA14925.1| transporter [Serratia odorifera 4Rx13]
          Length = 362

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 49/355 (13%), Positives = 99/355 (27%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  +AV+     F   GA  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 1   MLAAIAVIMLFFTFTTEGAYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 59

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA-------- 125
             +   +  I     G  + L I V+ +     G   G      +     +         
Sbjct: 60  MGLLGGAAAIFDVWLGWPLPLTIGVTLLAGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFR 119

Query: 126 ---------------------------------TLIMSEIFQNILIKWKPITNGKAGIYV 152
                                             +    +   +  +W+  +        
Sbjct: 120 GILIGITNGTTVAPTSGAMSQIGQSYLPSGVGFGIGAVGLMLFVAWQWRRRSRRAQLGLP 179

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                   T    L          +     +   +L +  L  + I    RTA       
Sbjct: 180 VAAAAGDVTRQSLLAVVVLGAIYLLNDYRGVPTPVLILTALMLAGIFMATRTAFGRRIYA 239

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N  A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 240 IGGNIDAARLSGVNVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 299

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 300 VIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGAILLLAVWM 354


>gi|238783904|ref|ZP_04627921.1| Xylose transport system permease protein xylH [Yersinia bercovieri
           ATCC 43970]
 gi|238715143|gb|EEQ07138.1| Xylose transport system permease protein xylH [Yersinia bercovieri
           ATCC 43970]
          Length = 362

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 54/355 (15%), Positives = 105/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  +A++     F   GA  S + I ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 1   MLAAIAIIMLFFTFTTEGAYLSARNISNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 59

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+  +    G   G      +               
Sbjct: 60  MGLLGGIAAIFDVWLGWPLPLTIVVTLGLGLVLGAWNGWWVAYRKVPSFIVTLAGMLAFR 119

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+ +     +   + R  +   
Sbjct: 120 GILIGITNGTTVSPTSNAMSQIGQSYLPNGLGFGIGAIGLMLFVAWQWHRRSHRIRLGLP 179

Query: 171 RFPSSFVIYEIFMYYVL------------------LGMCFLSASIILWLRRTAISNAWRT 212
                  +    +  ++                  L +  L  + I    RTA       
Sbjct: 180 VAAPQGDVTRQSITAIIVLGAIYLLNDYRGVPTPVLILTALMLAGIFMATRTAFGRRIYA 239

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N  A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 240 IGGNIDAARLSGVNVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 299

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 300 VIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGAILLLAVWM 354


>gi|229023449|ref|ZP_04179949.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus AH1272]
 gi|228737859|gb|EEL88355.1| Branched chain amino acid ABC transporter, permease [Bacillus
           cereus AH1272]
          Length = 159

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 60/155 (38%), Gaps = 9/155 (5%)

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
           ++    +++I    + I  N++   +L   ++  K+ A  V+     ++G  F  +   +
Sbjct: 1   MLRLFTKSSIGKVLKAISQNEQRVEALGYKVLHYKIIASVVAGVVAAISGGLFVITLRFV 60

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +  +F     +  + + ++GG+ +L            +       +  Y+ S L  +   
Sbjct: 61  NTTVFSIEMTLNALLMTMIGGVGTLI---------GAIAGAGIIESLKYYLSELATEYPI 111

Query: 317 NMRHTTLMVIALFLVILMRSHSLLRLRTPSNFLER 351
             R T ++ +   +V+L+    L+         +R
Sbjct: 112 FERWTIILGLLYIIVLLVFPKGLVGTVKKLKNFKR 146


>gi|148800307|gb|ABR12872.1| Orf18 [Mesorhizobium sp. CJ1]
          Length = 342

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 45/299 (15%), Positives = 90/299 (30%), Gaps = 20/299 (6%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           +F+      + + +  M +Q+ +  + A G++ V+   G + L+      + A     L 
Sbjct: 46  IFVGQSFLMNAQRLKIMILQVSVIGIIAVGVTQVI-ITGGIDLSSGSMVGLTAMIAASLA 104

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
                +                 +  LP +      LA+  L        I     P   
Sbjct: 105 QSSAWT-----------KALYPSLTDLPFVIPILVGLAVGLLAGVFNGALIAYTKIPPFI 153

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
              G  V+ R      T    +       +F+   I   + ++    ++    + LR T 
Sbjct: 154 ATLGTMVSARGLCKWYTKGQPVSGLTDQFTFIGSGI---WPVVVFLVVAVIFHVALRYTR 210

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
                  I  N +A       +    +  +AV+    G+AG   A+        M    E
Sbjct: 211 YGKFTYAIGANVQAARVSGIDVERHLIKVYAVAGLLAGVAGIVTASRAQTAQAGMGVMYE 270

Query: 266 NIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
              + + VI      GG+  ++     T IL  ++     +    F   +         
Sbjct: 271 LDAIAAAVIGGTSLTGGVGRITGTVIGTIILGTMMSGFTFLRVDAFYQEIIKGLIIIAA 329


>gi|111021070|ref|YP_704042.1| ABC sugar transporter, permease component [Rhodococcus jostii RHA1]
 gi|110820600|gb|ABG95884.1| ABC sugar transporter, permease component [Rhodococcus jostii RHA1]
          Length = 349

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/321 (10%), Positives = 93/321 (28%), Gaps = 21/321 (6%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L  +D     + VV  ++  +      S +    + + +    + A  ++ ++   G + 
Sbjct: 30  LAGWDSATIAITVVVLVVASVTNPDFGSSRNFAFLVLDLAPIFLIALPMTFII-ITGEID 88

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+      +   +   + +       ++     +      +   L +       L + +L
Sbjct: 89  LSVASVLGLSGAAMGWMWNNGFAIEMIIPMCILLGCVLGALNGFLVAK------LGLPSL 142

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
            ++     +      +  G   +    R Y    T           +  ++    ++ V+
Sbjct: 143 AVTIGTLALFRGLAFVLLGDQAVSNFPRAYTSWVTGTVGGTSIPNLAIPLVVVALVFAVI 202

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L             + T +         +  A           K   + V  A   +AG 
Sbjct: 203 L-------------QATPLGRDIYATGASDTAARFAGIDGARLKFWLYVVCGAVAALAGV 249

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            ++                + V++ V+LGG++      +   +L  VV L    N     
Sbjct: 250 LWSLRYSSA-RADNGSGLELAVVAAVLLGGVSIFGGKGRLAGVLAAVVLLATLQNALRLE 308

Query: 308 SLLKFDCSFNMRHTTLMVIAL 328
            +     +       ++ + L
Sbjct: 309 DISNEALTIVTGVLLIVAVLL 329


>gi|229827840|ref|ZP_04453909.1| hypothetical protein GCWU000182_03232 [Abiotrophia defectiva ATCC
           49176]
 gi|229788039|gb|EEP24153.1| hypothetical protein GCWU000182_03232 [Abiotrophia defectiva ATCC
           49176]
          Length = 326

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 82/270 (30%), Gaps = 21/270 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +L ++  +   L   +  +   +  +  Q  I ++   G       LG + L+     
Sbjct: 23  ISILVIMILVFGLLRYKSFLTSGNMLKILEQSSITILLGLG-EFFAILLGGIDLSVSSIM 81

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       L +  G+     + +  +I G     +    +   G    I TL    I +
Sbjct: 82  ALSGAVSAKLMTEAGMPPIAAVMIGVVILGIAVGFINGLLVTATGLPPFIITLGTQAILR 141

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
           +++                                  F  +           ++     +
Sbjct: 142 SMVYIITNARAASG-------------------LPVSFNKTIGGSIGIFPMPVIIALVTA 182

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A +  + ++T        I  N +A +    T+    + AF +S     +AG    A   
Sbjct: 183 ALLAYFGKKTQCGRNLYAIGGNPQAAWYAGITVKKHTIIAFMISGLCASLAGMVNIARLA 242

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKI 284
              P+     E   + + VI+GG +    +
Sbjct: 243 AAEPNAGTGYETFAIEA-VIIGGASFFGGV 271


>gi|225570369|ref|ZP_03779394.1| hypothetical protein CLOHYLEM_06466 [Clostridium hylemonae DSM
           15053]
 gi|225160901|gb|EEG73520.1| hypothetical protein CLOHYLEM_06466 [Clostridium hylemonae DSM
           15053]
          Length = 321

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 53/315 (16%), Positives = 115/315 (36%), Gaps = 22/315 (6%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I+  L V+  +++ ++  A  +   I ++ IQ     +   GL+ V+  LG + L+ V +
Sbjct: 18  IVWFLLVISLIVMGIYQPAFFTVTIIKNILIQASALGIMTVGLAHVL-LLGEIDLSIVGS 76

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            A  A     L     L  WL I    +     G++ GL   K +   L     +   + 
Sbjct: 77  MAFSAGLGTYLMKNNVLPWWLAIIFIIIFGCLIGLVNGLIITKLKAASLIETIAMNLILM 136

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +L                      G T  +  + + +     I  I +  +LL + FL
Sbjct: 137 GGLL------------------ALTAGRTFTNFPQEYNYVGKGSIAGIPLMSILLVLVFL 178

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
               +    +T    +   +  N     +    + + K+ AF +SS    +AG  ++A  
Sbjct: 179 CIGFLWN--KTTFGRSLFAVGGNISCAKASGINVDWVKIMAFVISSGLCALAGWMYSAYM 236

Query: 254 DRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFD 313
             + P  F  +  +  ++  ++GG++    + K   +L GV+ +           +  + 
Sbjct: 237 GAV-PASFGDNMQMYALASAVIGGVSLTGGVGKVNGVLGGVLLITLFQVGLNILGINPYL 295

Query: 314 CSFNMRHTTLMVIAL 328
            +       ++ + +
Sbjct: 296 INTAGGSMIMVAVII 310


>gi|145628279|ref|ZP_01784080.1| beta-methylgalactoside transporter inner membrane component
           [Haemophilus influenzae 22.1-21]
 gi|144980054|gb|EDJ89713.1| beta-methylgalactoside transporter inner membrane component
           [Haemophilus influenzae 22.1-21]
          Length = 338

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/303 (8%), Positives = 82/303 (27%), Gaps = 20/303 (6%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRY-- 88
               +     ++  Q  + ++ A G++ ++ + G   L+      + A     +      
Sbjct: 36  PTFLNLVNFSNILTQSSVRLIIALGVAGLLITQG-TDLSAGRQVGLAAVISATMLQSMEN 94

Query: 89  ----GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
                  +  +     +++      +          YL +   I +     I+  +  + 
Sbjct: 95  INRVFPEMGQIPIPVVILAVCAIGAVIGLVNGLVIAYLNVTPFIATMGTMIIIYGFNSLY 154

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
               G           +T             F +    + Y+ +     +  + +   +T
Sbjct: 155 YDAVGGSPIAGFSENFSTFA--------QGFFRVGSFKLSYITIYAAIAALLVWIMWNKT 206

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                   I  N +A       +    ++ + ++  F    G   A      + ++    
Sbjct: 207 RFGKNVFAIGGNPEAAKVSGVNVARNLVAIYMIAGMFYAFGGMLEAGRIGSATNNLGFMY 266

Query: 265 ENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           E   + + V+      GG+ ++  +     I   +      +    +   +       + 
Sbjct: 267 ELDAIAACVVGGVSFAGGVGTVIGVITGVIIFTVINYGLTYIGVNPYWQYIIKGSIIILA 326

Query: 320 HTT 322
              
Sbjct: 327 VAI 329


>gi|94972287|ref|YP_594327.1| inner-membrane translocator [Deinococcus geothermalis DSM 11300]
 gi|94554338|gb|ABF44253.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Deinococcus geothermalis DSM 11300]
          Length = 346

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 48/160 (30%), Gaps = 16/160 (10%)

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
            + +   +L    ++    L L RT      + I  N++        +   K++ + +  
Sbjct: 193 VLGVPIPILIFAAVALLGGLLLNRTRYGRYVQAIGSNEQVARYAAINVTGIKIATYVLLG 252

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG------MTSLSKIAKATAILIG 293
             + +A   +       +         +  I+ VI+GG         +        +L+ 
Sbjct: 253 ICVALATILYVPRLGSAT-PATGLLWELDAIAAVIIGGTALKGGAGRIWGTVVGAVLLVT 311

Query: 294 VVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +  +          +L      +     T  VI L   + 
Sbjct: 312 IENVL---------NLTNIISVYLNAAVTGFVIILVAFLQ 342


>gi|221213117|ref|ZP_03586093.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia multivorans CGD1]
 gi|221167330|gb|EED99800.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia multivorans CGD1]
          Length = 312

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 93/311 (29%), Gaps = 28/311 (9%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + +V  +          + + +  +  Q  I ++ A G++ V+   G + L+     A  
Sbjct: 13  VLLVLCIGFGFLTDGFFTLQNLSIVTQQASINIVLAAGMTFVI-LTGGIDLSVGSVLAAA 71

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
           A + ++  +  G   WL +P +  +    G I G      R     +    M+ +     
Sbjct: 72  AVASLLASTIPGW-GWLGVPAALAVGLVFGAINGGLISLLRLPPFIVTLGAMTAVRGVAR 130

Query: 138 IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASI 197
           +                    LG           F          + ++++  C + A  
Sbjct: 131 L--------------------LGNDTTVFNPQLPFAFIGNGTIFGVPWLVVIACAVIAIS 170

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              LRRT +     ++  N +A       +   +L  +A S    G+     AA     +
Sbjct: 171 WFILRRTVLGMRIYSVGGNPEAARLSGINVRAIQLFVYAASGLLAGLGAVMSAARLYAAN 230

Query: 258 PDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                 S  +  I+ VIL      GG+ S+        I+  +      +        + 
Sbjct: 231 GLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLTNGLVLLGVSDIWQYII 290

Query: 312 FDCSFNMRHTT 322
                      
Sbjct: 291 KGLVIIGAVAL 301


>gi|300857432|ref|YP_003782415.1| hypothetical protein cpfrc_00015 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300684886|gb|ADK27808.1| putative membrane protein [Corynebacterium pseudotuberculosis
           FRC41]
 gi|302205172|gb|ADL09514.1| Ribose/xylose/arabinose/galactoside ABC-type transport systems,
           permease component [Corynebacterium pseudotuberculosis
           C231]
 gi|302329731|gb|ADL19925.1| Putative ABC transport system, permease protein [Corynebacterium
           pseudotuberculosis 1002]
 gi|308275414|gb|ADO25313.1| Putative ABC transport system, permease protein [Corynebacterium
           pseudotuberculosis I19]
          Length = 361

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 43/295 (14%), Positives = 91/295 (30%), Gaps = 13/295 (4%)

Query: 4   FSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           FS  + + +    L AV   +L      + +S   + ++        + A  + +++   
Sbjct: 34  FSALIRRPEFASLLGAVAIFVLFLSVAPSFRSIDALTTVLYASSTLGIVAVSVGLLM-IG 92

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
               L+  +A    A +  +L     L+ W+   +S  I+ A G + G    K   D   
Sbjct: 93  SEFDLSSGVAVTTAALAATMLNYNLHLNSWVGALLSLFIALAIGALSGYLVTKTGIDSF- 151

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           + TL    + Q + +    +   +        +    +  +         S  V   +F 
Sbjct: 152 LITLAAFLMLQGLNLAITKLVTSQVATPSIADMEGFPSAQKVFAGTVHIGSVSVRATVFW 211

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           +   +              +T   N    +  +  A  +    +   K+  F        
Sbjct: 212 WIFFVAASSWLLF------KTRFGNWIFAVGGDANAARASGVPVARVKIILFMFVGFAAW 265

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIG 293
             G     + D I       +E + +I+ VI      GG  ++   A    I   
Sbjct: 266 FVGMHNLFTFDSIQAGQGVGNEFLYIIAAVIGGCAMTGGRGTIIGTAIGALIFGM 320


>gi|260463858|ref|ZP_05812055.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
 gi|259030455|gb|EEW31734.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
          Length = 332

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/320 (11%), Positives = 93/320 (29%), Gaps = 23/320 (7%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
            +     + +  ++  + L     A  + K + ++   I    + A G++ V+   G + 
Sbjct: 21  FSTQTFWVVIAVILACIFLSFATDAFATSKNLYNITRNITFVAIIALGMTFVI-ITGGID 79

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+      + +    +           ++   A                          L
Sbjct: 80  LSVGSVLCLSSMVLAVTMHAGYSIEVGILASIATALAIGAF---------------NGIL 124

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I    F   ++    ++  ++   VA     +        +         ++ I    + 
Sbjct: 125 IAYLGFPPFVVTLGMLSIARSLAMVASNNTVVFQFGPDHDKLLALGGGAWVFGIANPVLY 184

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + +  L    IL    T        I  N+ A       +   K++ + +S+   G+AG 
Sbjct: 185 MILLGLITGFILRW--TKFGRHIFAIGGNEHAATLTGVPVKQIKVAVYMISALSAGIAGI 242

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
                   ++ ++    E  ++ + VI      GG+ +        A++  +      + 
Sbjct: 243 IQTGWLGAVTTNLGTGMELQVIAATVIGGANLAGGVGTAFGAIVGAALIEVIRNSLGLLG 302

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F   +    +  M    
Sbjct: 303 INAFWQGVFIGGAILMAVLF 322


>gi|150376901|ref|YP_001313497.1| monosaccharide-transporting ATPase [Sinorhizobium medicae WSM419]
 gi|150031448|gb|ABR63564.1| Monosaccharide-transporting ATPase [Sinorhizobium medicae WSM419]
          Length = 320

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/323 (10%), Positives = 94/323 (29%), Gaps = 29/323 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R  K    + L  V+  ++   F     +     ++  Q+ +  + A+G++ V+  LG 
Sbjct: 12  VRALKQYGGIFLSLVMLCIVFSFFNPRFMTLINFMNILQQVAVIAIAAFGMTWVI-LLGE 70

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+         +     +  +       +    +   L +      ++   
Sbjct: 71  IDLSVGSIIAVAGMVGAQCFAFGMGFVPAIALTLLAGALMGMLNGVLTAKLLLPSFIVTV 130

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                                         +        ++I    + +      + +  
Sbjct: 131 ---------------------ATMGIYRGMVSLPTNGAPAMIENETWTAIGTESFLGLPI 169

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++  +  L     + L +T+          N++A       +   K+  F +S     ++
Sbjct: 170 IIWVVAVLFVVNQIALSKTSFGRRAYLTGGNREAAVYSGIKVDRLKILIFMISGVMAAIS 229

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCC 299
           G   ++       +    S  +  I+  +L      GG+ ++        I+  +     
Sbjct: 230 GILLSSRLFSAQTNA-GMSYELDAIAAAVLGGTSLAGGVGTMVGTLIGALIIGVMNNGMN 288

Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322
            ++  YF  L+       +    
Sbjct: 289 MLSVPYFYQLIVKGLVILIAVWL 311


>gi|325846944|ref|ZP_08169801.1| branched-chain amino acid ABC transporter, permease protein
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481186|gb|EGC84230.1| branched-chain amino acid ABC transporter, permease protein
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 311

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 80/266 (30%), Gaps = 7/266 (2%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G++++       IGA         Y  + WL      +     G+I  + S+ F GD  
Sbjct: 34  SGVVNIGLEGMMTIGALVAA-TVGYYVGNPWLGFLAGGLAGMFFGLIHAIVSVTFAGDQT 92

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
                I +      L   +   +G            +      LI+     + F  Y   
Sbjct: 93  ISGIAINTLAPGLALFLARLFFDGATQTPSIPLENKIPRLFDGLIKNQGLKNIFSQYATV 152

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
              ++         + ++L +T        + ++ KA  +L+ ++   +  A   S    
Sbjct: 153 YLALISV-----ILLYVFLYKTKWGLRLIAVGEHPKAAETLDISVRKIRYLAVMFSGFMG 207

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+ GA  + +   +        +  I +  VI G       +   +        +   + 
Sbjct: 208 GLGGASMSLAVVSVFSPTLIAGQGYIALVCVIFGNW-KPQGVLVGSLFFGLTQAIATYLT 266

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIAL 328
               +  ++F          L +I  
Sbjct: 267 GTSIHLPMEFISMIPYISILLFLILF 292


>gi|261492777|ref|ZP_05989325.1| galactoside ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261495609|ref|ZP_05992055.1| galactoside ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261308716|gb|EEY09973.1| galactoside ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261311630|gb|EEY12785.1| galactoside ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 336

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/297 (9%), Positives = 81/297 (27%), Gaps = 8/297 (2%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            +  S +   ++  Q  + ++ A G++ ++ + G   L+      + A     L      
Sbjct: 34  PSFLSLRNFSNILSQSSVRLIIALGVAGLIVTQG-TDLSAGRQVGLAAVISATLLQSMEN 92

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              +   +S +      + +             +   +    F   +     +    +  
Sbjct: 93  MNKVFPNLSEIPIPVVVLTVCAIGAVIGLFNGFVVAYLNVTPFIATMGTMIIVYGINSLY 152

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
           Y A     +         F +    F  + +   Y+ +     +  +     +T      
Sbjct: 153 YDAVGSSPIAGFSDDFSTFAQGFFRFGDFRLS--YITIYAVIATIIMWTLWNKTRFGKNV 210

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N +A       +    +  + +S  F    G   A      + ++    E   + 
Sbjct: 211 FAIGGNPEAARVSGVNVPLNLMGIYMLSGIFYAFGGMLEAGRIGSATNNLGFMYEMDAIA 270

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + V+      GG+ ++  +     I   +      +    +   +       +    
Sbjct: 271 ACVVGGVSFAGGVGTIIGVVTGVLIFTVINYGLTYIGVNPYWQYIIKGGIIILAVAI 327


>gi|254382147|ref|ZP_04997508.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194341053|gb|EDX22019.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 424

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 84/296 (28%), Gaps = 10/296 (3%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV-----ILGSRYGLSIWL 94
            S  +   +Y + A GL +   + GL +        + A  +      +       ++ +
Sbjct: 9   LSGLVSGALYALLATGLVLSYSASGLFNFAHGATAYLCALVFYEVRSGLGWPAVPAALLV 68

Query: 95  LIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVAD 154
           ++ ++  +  A   +M     +       +AT+ +        +    +           
Sbjct: 69  VLVLAPGLGWALDRLMFRRLARVGESAQIVATIGLLVALPAAGLWAVELLADAGAPVKPA 128

Query: 155 RLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIR 214
              F    V          +  V  +       +    ++ ++ + LR T +    R   
Sbjct: 129 ENQFGLPGVGPSPARSWQLTEGVGIDSDQLITWVATALVAVALWVLLRHTRLGLRLRAAV 188

Query: 215 DNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI 274
           DN+        +       A+ ++S   G+AG          + D   F    +  +  +
Sbjct: 189 DNRSLTELRGISADRLSSVAWMIASGLAGLAGVLATPLLGLSAHDFTLFL--FVSATAAV 246

Query: 275 LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
           +G   S+         L  +  L  G   +             +    L    L L
Sbjct: 247 IGRFASVPLAFAGGLGLGVLQNLVAGYASFAERIT---GFRTAVPFLILFGGLLVL 299


>gi|332160313|ref|YP_004296890.1| Amino acid or sugar ABC transport system, permease protein
           [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
 gi|318604454|emb|CBY25952.1| urea ABC transporter, permease protein UrtB [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325664543|gb|ADZ41187.1| Amino acid or sugar ABC transport system, permease protein
           [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
 gi|330859576|emb|CBX69917.1| hypothetical protein YEW_KP45280 [Yersinia enterocolitica W22703]
          Length = 289

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/282 (12%), Positives = 75/282 (26%), Gaps = 17/282 (6%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
               V+ A GL+++ G +G+++L        GAY  +++        + ++  S   +  
Sbjct: 18  FAYLVLAALGLAVIFGMMGVINLAHGEFIMCGAYVTILMNKAGLPLPFAMLAGSLAAAFF 77

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
            G++  L      G                +             +  +  L    +    
Sbjct: 78  GGVVERLVVRHLYGR---------------LYDSVVATWAISLIVQQSMLLIAGPSLEGL 122

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
              F  F      +  +   +      +   +      T      R    N +    L  
Sbjct: 123 STPFGSFTLGEYSFATYRALLPFFAIAILMVLYWLFFHTNYGVCARATIQNARMASCLGL 182

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                    FA+ +   G+AGA +A +   +      F         V++GG   L    
Sbjct: 183 ETDRIYTLTFALGAGLAGLAGAIYAPTLTAVPTMGSSFIVQ--AFVSVVVGGANVLVGTI 240

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            A   L  +              +     +  +       + 
Sbjct: 241 PAAIALGAIQTGLNSWYGQLAGQIGLLVTAVLVIRLLPNGVG 282


>gi|330809105|ref|YP_004353567.1| branched-chain amino acid ABC transporter permease [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327377213|gb|AEA68563.1| putative branched-chain amino acid ABC transporter, permease
           component [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 293

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 91/305 (29%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   +Y + A G  ++  + G+ +          A ++ +     GLS  L + +
Sbjct: 8   LIGGLLAGTLYSLVAIGFVLIYKASGVFNFAQGAMLLFAALTF-VSLREQGLSFALALVL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++     +++    L+   +   I   + +     I+        G            
Sbjct: 67  TVLVMIVGALLIERLVLRPLVNRSQITLFMATLGLSFIIEGLAQGLMGAQ---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F            A + L   +T +  A R + D+ +
Sbjct: 117 -VRALDLGIEDVPLFVGEIMISQFDLIAAGVSVLTVAVLALLFNKTRVGVALRAVADDTR 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  SL   +       +AV+     +AG  + A +             +  + ++I+GG 
Sbjct: 176 AALSLGINLNRIWQIVWAVAGVVGLVAGLLWGARQGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+     L            +    +              + + +R   
Sbjct: 233 TSIGGAIVGGLIVGAAENLAEAYIGPLIGGGITPWFA---------YFLALIFLYIRPSG 283

Query: 339 LLRLR 343
           L   R
Sbjct: 284 LFGDR 288


>gi|325688954|gb|EGD30962.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Streptococcus sanguinis SK115]
 gi|327468412|gb|EGF13897.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Streptococcus sanguinis SK330]
          Length = 327

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 48/330 (14%), Positives = 109/330 (33%), Gaps = 26/330 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLG----ATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           ++L K   +  L+A++  +++F F      + +S   + S+          A G++ V+ 
Sbjct: 9   MKLEKTVGLQKLIALIALVVIFAFFAISSESFRSFDTVVSILDASYYIGFLAIGVTFVI- 67

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G + L+        A    +L ++ G  +WL +    +I G  G++ G+   KF    
Sbjct: 68  ITGGIDLSIGTVMMCSAIIGGVLHTKMGWPLWLSLLAILVIGGLFGLLNGIMVAKFGLPP 127

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                           +    I+ G + I    +             +     +   +  
Sbjct: 128 FIAT------------LGTMMISRGLSSIVSNVQSVTFPLRGTGEGWYKDLFRTQDNFPT 175

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +  +++     +      L +T I      I  N++A       ++  +  A+ +    
Sbjct: 176 GLIVLVIVAVLAAVV----LNKTKIGRYIFAIGSNKEATRLSGVNVVKWEGMAYVIGGLS 231

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+A   +AA+   I P      E   +  +V+      GG+ S+        I+  +  
Sbjct: 232 AGLAAVAYAATYSTILPGTGNGMELDAIAGVVVGGTSLAGGVGSVIGTIIGVFIMSVLKI 291

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
               ++      L        +     + I
Sbjct: 292 GLPYIDLQPHYQLFITGFVVIVAVYFDIFI 321


>gi|212639828|ref|YP_002316348.1| sugar ABC transporter permease [Anoxybacillus flavithermus WK1]
 gi|212561308|gb|ACJ34363.1| ABC-type sugar transport system, permease component [Anoxybacillus
           flavithermus WK1]
          Length = 319

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 85/312 (27%), Gaps = 13/312 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  V+        L +  +      +   I I  + A G++  +   G   L+     +
Sbjct: 10  ILAIVIVIAFFSFSLDSFFTYANFSDILRSISIVTLVAIGITFSLIVDG-FDLSVGSTVS 68

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +   +       +   + + + V  ++    G++     ++ R   L             
Sbjct: 69  LATIASASALVLHRQELLVALIVPLLLGALVGLLNAFLIIRLRLPDLLAT-------LAV 121

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + I          G  + + +      V        F          + + +L M  L  
Sbjct: 122 MYIINGVQLTYTKGFSIYNDMPLPEGGVAPGKFIPSFLFIGQGELFGVPFSVLLMLLLVV 181

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              L+L  T     +    +N++A       +   +  A+ +S  F  + G   A+    
Sbjct: 182 CAHLFLTYTKTGRLFYMTGENREAAHLTGIPVNRYRTYAYMISGLFAALGGIVLASRIGT 241

Query: 256 ISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
                        V +      V   G  ++      +  +  ++     MN  Y+   +
Sbjct: 242 GQVSAGASLLMDGVAAAFIGFSVFGAGKPNVVGTLLGSIFIGVLLNGLTMMNVPYYAQDI 301

Query: 311 KFDCSFNMRHTT 322
                       
Sbjct: 302 IKGALLIFALAL 313


>gi|325478507|gb|EGC81620.1| ribose transport system permease protein RbsC [Anaerococcus
           prevotii ACS-065-V-Col13]
          Length = 314

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 97/312 (31%), Gaps = 25/312 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
               ++  + + +   A      + ++  Q++I    A G++ V+   G + L+     A
Sbjct: 17  IAALIILIVFVSVLNPAFLQVNNLLNLMRQLIINGFIALGMTFVI-LTGGIDLSVGSTLA 75

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             +  +  L      +  L I ++  +    G+I GL   K +     +    M+     
Sbjct: 76  FTSAIFAGLLQNGMNTG-LAILITLALGLCLGLINGLLITKGKLAPFIVTLATMTIFRGL 134

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            L+          G  ++              + F  P   +++ I              
Sbjct: 135 TLVYM-------DGRPISGPKDNFAFQFLGKGQVFGIPFQVILFLIV-----------YI 176

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +   L +T+       +  N+KA F     I   K+  + +S+    ++G    +  + 
Sbjct: 177 VLSTLLNKTSHGRKIFAVGGNEKASFISGIKIDKVKVLVYVISALMAVVSGLVLTSRLNS 236

Query: 256 ISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
             P      E   + ++V+      GG  SL+       IL  +      +    F   +
Sbjct: 237 AQPTAGSAYEMDAIAAVVLGGTSMTGGSGSLTGTLIGILILGVLNNGLNLLGVSSFYQQI 296

Query: 311 KFDCSFNMRHTT 322
                  +    
Sbjct: 297 VKGVVILIAVLI 308


>gi|290956596|ref|YP_003487778.1| ABC transporter transmembrane protein [Streptomyces scabiei 87.22]
 gi|260646122|emb|CBG69215.1| probable ABC-type integral membrane transport protein [Streptomyces
           scabiei 87.22]
          Length = 440

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/342 (11%), Positives = 89/342 (26%), Gaps = 55/342 (16%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  +V   +  L      S   + ++   +    M A GL  V+  LG + L+     
Sbjct: 66  VVIGLIVIWTIFQLQNDRFLSADNLSNISYFLSATGMLAIGLVFVL-LLGEIDLSVGSVS 124

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + +  + +L    GLS WL + ++ +   A G + G    +       +          
Sbjct: 125 GLASTVFAVLAVNQGLSSWLAVVLAILTGIAIGALHGWFFARVGVPAFVVTLAGFLGWNG 184

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY--------- 185
            +L                       ++               +  +             
Sbjct: 185 LMLWLLGDSGTINIPSDTGPIRLLGQSSFFMDQAIIGAWLLAGLAVVLSLVGNLNEQRRR 244

Query: 186 ---------------------------------------VLLGMCFLSASIILWLRRTAI 206
                                                   L+        +   LRRT  
Sbjct: 245 RAAGVPFRATSEILLRVGALAVASFASAAVLNNASGVSNALVIFLAALVIVDFVLRRTTY 304

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                 +    +A       +   +++ FA+S  F  + G FFA      +      +  
Sbjct: 305 GRKVFAVGGGIEAARRAGINVPMIRITVFAISGGFAAIGGMFFAGQTASATLSAGSGNIL 364

Query: 267 IIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMN 302
           ++ I+  ++      GG  S+        ++  +      +N
Sbjct: 365 MLAIAAAVIGGTSLFGGRGSVWSALLGMLVIQSIQTGLDLLN 406


>gi|167759542|ref|ZP_02431669.1| hypothetical protein CLOSCI_01892 [Clostridium scindens ATCC 35704]
 gi|167662852|gb|EDS06982.1| hypothetical protein CLOSCI_01892 [Clostridium scindens ATCC 35704]
          Length = 316

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/322 (11%), Positives = 95/322 (29%), Gaps = 27/322 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++       L  + +   +++        +++ I ++  QI I  + A G++ V+   G 
Sbjct: 8   MKATLRSFALVFIIIATFIIMSFVSPVFFTEQNIINIIRQISINGIIAVGMTFVI-LTGG 66

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+ +     L  +    +   I    +                        
Sbjct: 67  IDLSVGSVVAVTSVICGYLLQQGWNWLLTCIIALTVALFYGCF---------------NG 111

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            L+    FQ  +     +T G               + +S ++  +     V   I +  
Sbjct: 112 ILVAYVGFQPFIATLATVTMGSGIALAFSDGKPFTISNKSFLQIGQGYVGAVPIPIILLV 171

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +++ +  +        + T        I  N+ A           +L  + +S+    + 
Sbjct: 172 IVVAIGIIIL------KTTTFGRYVFAIGGNKNAAKLSGVRTKKVELLVYVISALCAAVV 225

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G   +A      P   +  E   + ++ I      GG+ +L+       +L  +      
Sbjct: 226 GLILSARISSGQPTAGEGYELDAIAAVAIGGTSMSGGIGTLTGTIFGFILLGLMTNSMNL 285

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +N   F   +       +    
Sbjct: 286 LNINSFYQEIAKGILIIIAVFL 307


>gi|319782153|ref|YP_004141629.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168041|gb|ADV11579.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 322

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 103/314 (32%), Gaps = 27/314 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  ++  ++L L      S   + ++  Q+ +  + A G++ V+ + G + L+     
Sbjct: 22  IVISFILLFVVLSLASPNFLSTNNLLNVLRQVSMNGVLAVGMTFVILTAG-IDLSIGSLL 80

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+       L +       LL   + +  GA    +    + +      +ATL M  + +
Sbjct: 81  ALAGAVAASLVTGADAFNPLLAVAAGVAVGALCGAVNGGLIAYFKVPAFVATLGMLSVAR 140

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
              +                 LY  G  + +L   FR+    ++  I +  ++  + F  
Sbjct: 141 GATL-----------------LYSGGRPIPNLSLEFRWLGQGLVLGIPVPVIIFAIVFAV 183

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A+I+L  R +        +  N ++  +          S + +  A  G+AG    A   
Sbjct: 184 AAIVL--RYSIYGRRVYAVGGNPRSAKTSGINTSGIIFSVYVIMGALAGLAGVMLTARTT 241

Query: 255 RISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
                       +  I+ V++      GG+  +        I+  +      M    +  
Sbjct: 242 SA-LPQAGIGYELDAIAAVVIGGTSLTGGIGRIGYTLVGVLIIGMISNGLDLMGVSSYYQ 300

Query: 309 LLKFDCSFNMRHTT 322
            +       +    
Sbjct: 301 QIIKGSIIVLAVLI 314


>gi|30262934|ref|NP_845311.1| ribose ABC transporter, permease protein, putative [Bacillus
           anthracis str. Ames]
 gi|47528270|ref|YP_019619.1| ribose ABC transporter permease [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49185771|ref|YP_029023.1| ribose ABC transporter permease [Bacillus anthracis str. Sterne]
 gi|165868657|ref|ZP_02213317.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0488]
 gi|167632385|ref|ZP_02390712.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0442]
 gi|167637547|ref|ZP_02395826.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0193]
 gi|170685140|ref|ZP_02876364.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0465]
 gi|170704659|ref|ZP_02895125.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0389]
 gi|177649593|ref|ZP_02932595.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0174]
 gi|190564614|ref|ZP_03017535.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|227814219|ref|YP_002814228.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. CDC 684]
 gi|229602095|ref|YP_002867220.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0248]
 gi|254685532|ref|ZP_05149392.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. CNEVA-9066]
 gi|254722935|ref|ZP_05184723.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A1055]
 gi|254737988|ref|ZP_05195691.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. Western North America USA6153]
 gi|254742838|ref|ZP_05200523.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. Kruger B]
 gi|254752305|ref|ZP_05204341.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. Vollum]
 gi|254760820|ref|ZP_05212844.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. Australia 94]
 gi|30257567|gb|AAP26797.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. Ames]
 gi|47503418|gb|AAT32094.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49179698|gb|AAT55074.1| ribose ABC transporter, permease protein, putative [Bacillus
           anthracis str. Sterne]
 gi|164715383|gb|EDR20900.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0488]
 gi|167514096|gb|EDR89463.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0193]
 gi|167532683|gb|EDR95319.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0442]
 gi|170130460|gb|EDS99321.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0389]
 gi|170670500|gb|EDT21239.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0465]
 gi|172084667|gb|EDT69725.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0174]
 gi|190563931|gb|EDV17895.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|227004722|gb|ACP14465.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. CDC 684]
 gi|229266503|gb|ACQ48140.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0248]
          Length = 317

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 90/305 (29%), Gaps = 27/305 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L ++Y  ++ +   +      +  M    +I V+ A G S V+     + ++   + 
Sbjct: 12  IITLLLIYIAIVGMINPSFIQFNSLSLMVKSSVILVVLAIGQSFVL-FTKNIDVSVGSSM 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A    +L +             ++ +      +             +  +IM+    
Sbjct: 71  GLSAAVCGMLLTNEYS------ASLSIFAAITLGAIIGFVNGMGVAKFRVPAIIMTLGML 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+     I  G   I                     F     I  + +   +  +  + 
Sbjct: 125 GIIRGAMLIFTGGKWIEDIP---------------NDFKQLSSIVILGLPITVWFVLIIL 169

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +  +LR+      +  + DN+     +   +   K+ AF +S     +AG  F  +  
Sbjct: 170 LLLYFFLRKVPFGRYFYAVGDNEDGARLIGIPVNKVKICAFIISGISAALAGCIFVMNIG 229

Query: 255 RISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            I        E  ++ + V+      GG  SL   A     L  +      +    F + 
Sbjct: 230 FIPNQTGTGLELQVIAAAVLGGIHLKGGTGSLFGAALGALFLETISSSLVFLKIPAFWNN 289

Query: 310 LKFDC 314
                
Sbjct: 290 AISGF 294


>gi|296161704|ref|ZP_06844507.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
 gi|295888018|gb|EFG67833.1| inner-membrane translocator [Burkholderia sp. Ch1-1]
          Length = 293

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 88/304 (28%), Gaps = 24/304 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y M A G  ++  + G+ +         GA +  +      +   L   V
Sbjct: 8   LVGGLLAGVMYSMVAIGFVLIYKASGVFNFAQGSMVLFGALT-YVSLVERHVKPVLAFGV 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +        +++G   L+       I   + +     IL     +  G            
Sbjct: 67  TLGALVLIALLIGRLVLRPLVSRPPIVLFMATLGLSFILEGAAQLFWGAQVH-------- 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F  +       L   + L   RT +  + R + D+  
Sbjct: 119 ---GLDLGIDDKPLNVGGIMISQFDIFAAATAGVLVIGLSLLTNRTRLGLSLRAVADDPL 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +       +A++     +AG  + A               +  + ++I+GG 
Sbjct: 176 AALAIGVRLPRVWAIVWALAGFVSLVAGLLWGARLGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           +S+        ++    +L            ++              +   L +L R   
Sbjct: 233 SSIGGAIVGGLLIGASEKLAEVYVGSLLGGGIENWFP---------YLLAMLFLLARPVG 283

Query: 339 LLRL 342
           L   
Sbjct: 284 LFGE 287


>gi|229043719|ref|ZP_04191422.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus AH676]
 gi|229109419|ref|ZP_04239014.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus Rock1-15]
 gi|228674045|gb|EEL29294.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus Rock1-15]
 gi|228725618|gb|EEL76872.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus AH676]
          Length = 286

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 103/305 (33%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  I  L+  
Sbjct: 8   FVNGISTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNVTGSYILALVGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 68  VAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKIFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +    L     F    +I   +  +V+L    +  +++L L++T I    R    +++
Sbjct: 116 PISAKLPLWLQGSFTFGGIILIKYRLFVILIGIIIYIALLLLLKKTKIGLMIRAGVMDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++   
Sbjct: 235 GSVQGSAIASLIVGLAGAFTAYF--------------IPDLSLAINMLMLLFFLIVKPTG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|91781271|ref|YP_556478.1| ABC sugar transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91693931|gb|ABE37128.1| monosaccharide ABC transporter membrane protein, CUT2 family
           [Burkholderia xenovorans LB400]
          Length = 356

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 44/322 (13%), Positives = 85/322 (26%), Gaps = 15/322 (4%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
                L  V  L++            +  +        +FA G ++VV + G + ++   
Sbjct: 44  WFTVALIAVTCLIVGAINPRFFQLATLFDLLHSATTTSLFALG-TLVVLASGGIDVS--- 99

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
             AI A +   +                +++GA G  M           L   +LI++  
Sbjct: 100 FTAIAALTMYGITKAVFAWWPDAPFALIVVTGALGGTMLGVVNGVLVHRLKAPSLIVTIG 159

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            Q +         G                +             V+    +  V   +  
Sbjct: 160 TQYLYRGLLLTFIGTTFFMNIPHSMDRFGRIPLFFYHTADGLRAVLPVSVLALVAAAVLT 219

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
                     RT +      +  +      L   +    L  F  +    G+AG    ++
Sbjct: 220 WWLL-----NRTMMGRGVYAMGGSLAIAERLGYNLRAIHLFVFGYTGLLAGIAGILHVSN 274

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
               +P        + VI+ VILGG              +G   L   +     + L+  
Sbjct: 275 NRLANPFDL-VGSELDVIAAVILGGAR-----ITGGTGTVGGTLLGVALVTLINSVLILT 328

Query: 313 DCSFNMRHTTLMVIALFLVILM 334
                 +   +    L    L 
Sbjct: 329 GVPSTWQKVIIGAFILIAGTLF 350


>gi|333010338|gb|EGK29771.1| ribose transport system permease protein rbsC [Shigella flexneri
           VA-6]
          Length = 311

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/313 (9%), Positives = 92/313 (29%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +         ++  + ++  Q  I ++ A G++ ++   G + L+     
Sbjct: 10  ILPILILIVAVFGFIAPNFFTESNLLNITRQASINIVLAAGMTFII-LTGGIDLSVGSIL 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A + +++      ++  +     +          L +      ++       +    
Sbjct: 69  GTTAVAAMVVSLSPEFAMLSIPAALMLGLLLGLFNGALVAFAGLPPFIVTLGTYTALRGA 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+                           +     F      Y   + ++++    + 
Sbjct: 129 AYLL---------------------ADGTTVINSNINFEWIGNNYLGPVPWLVVIALAVI 167

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 LRRT +      +  N +A       +    L  + +S    G+ G    +   
Sbjct: 168 VLCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGIMSTSRLY 227

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 228 SANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 287

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 288 VIKGAVIIIAVLI 300


>gi|323358586|ref|YP_004224982.1| ribose/xylose/arabinose/galactoside ABC transporters, permease
           components [Microbacterium testaceum StLB037]
 gi|323274957|dbj|BAJ75102.1| ribose/xylose/arabinose/galactoside ABC-type transport systems,
           permease components [Microbacterium testaceum StLB037]
          Length = 347

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/299 (11%), Positives = 86/299 (28%), Gaps = 21/299 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +  +       ++ A G+++V+ + G + L+     A+     + +         L + +
Sbjct: 44  LIDILRNSAPLMLVALGMTLVIATRG-IDLSVGAIMAVSGAVALTIIEASPEPGNLGVVM 102

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            A+++     ++      F    L I  +I + +          +               
Sbjct: 103 IAIVAAVGTALLLGVWNGFLVSVLGIQPIIATLVLMLAGRGVALLI-------------- 148

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 + I    +      Y + + +           + +  RRTA+      +  N +
Sbjct: 149 -TKGFITTINSDPYQFMAQGYVLGLPFAFYVSIVAVIVVGVLERRTALGMLTEAVGINPE 207

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A              A+  S    G+AG  ++++      +       +  I  V+LGG 
Sbjct: 208 ASRLAGVRSRGIIWGAYIASGTLAGIAGILYSSNIMAADANAAGLYIELDAILAVVLGGT 267

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
                        I    +         +++        +    +    L +V+L    
Sbjct: 268 -----SLAGGKFSIAGTVVGVFTIQTLKSTITFLGVPPAVSPVFMAAAVLIVVLLQSPR 321


>gi|111024987|ref|YP_707407.1| ABC ribose transporter, permease component [Rhodococcus jostii
           RHA1]
 gi|110823966|gb|ABG99249.1| ABC ribose transporter, permease component [Rhodococcus jostii
           RHA1]
          Length = 345

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/301 (10%), Positives = 83/301 (27%), Gaps = 30/301 (9%)

Query: 5   SLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLG 64
            L    +   +  + +     +FL          + ++  Q  I  + A   + V+ +  
Sbjct: 40  KLEWRDFAIYIGFVVIFLLFTVFLRDDGFLLTSNLLNIVRQTAIIAVMAVAGTFVIAAA- 98

Query: 65  LLSLNCVIAYAIGAYSYVILGSRYGLSIW-LLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
            + L+      + +    +  S  G  +  +L  +   +         +  L      + 
Sbjct: 99  QIDLSIGSVAGLSSVVTAMTISSTGSVLVGVLAGLGTGVVVGTINGGLVAILGLPSFLVT 158

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           +A L ++      +  ++P+                      ++               +
Sbjct: 159 LAMLGIAAGVAQWISNFQPV---------------------PILNKAFTNLFGSGDFGPV 197

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
             +LL         ++ + +TA          N+ A                 +S+    
Sbjct: 198 PSLLLWAGLFVLIGVVVMNKTAFGRQVLAAGGNETAARFTGVRTKRITFYVLLISAIVAS 257

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVEL 297
           +AG  +A          +   + + VI+ V+LGG         +   A     +  +   
Sbjct: 258 IAGMLYAGRLQS-GRYQWGTGDELSVIAAVVLGGTSLFGGYGRVIGSAIGAVFIGLINNG 316

Query: 298 C 298
            
Sbjct: 317 L 317


>gi|57234260|ref|YP_181670.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein, putative [Dehalococcoides ethenogenes 195]
 gi|57224708|gb|AAW39765.1| high-affinity branched-chain amino acid ABC transporter, permease
           protein, putative [Dehalococcoides ethenogenes 195]
          Length = 294

 Score = 49.9 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 85/269 (31%), Gaps = 14/269 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +Y+ +     L+Y + A G +++  S  + +L       I ++    + ++ G+  WL  
Sbjct: 6   QYVITGITVGLVYSLIALGFTLIWKSSSVANLALGQMVLICSWFTYSMLAQVGMPFWLGF 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               + + A G +M    L+       ++ + ++      L                   
Sbjct: 66  ICVVLFALALGWLMERIILRPLIGQPILSLVTVTLGVGFFLEGVVSFIW----------- 114

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +  +           +      +       L A + L+ +   +  A R   D+
Sbjct: 115 PQSVAALPKIFPETPIHIGSAVISQEYVWAAGISLLLFAMLTLFFKYHKMGVAMRATADD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           Q+A  +    +      ++ ++     + G   ++        +      I   S+VILG
Sbjct: 175 QQAVQACGIPVTRIFSLSWMLAIVLAAVGGVLMSS---IGGITLGLVETGIKAFSVVILG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G+ S      A  I+     L  G     
Sbjct: 232 GLDSFLGAMIAGPIIGLAENLGGGYLTSL 260


>gi|256395818|ref|YP_003117382.1| Monosaccharide-transporting ATPase [Catenulispora acidiphila DSM
           44928]
 gi|256362044|gb|ACU75541.1| Monosaccharide-transporting ATPase [Catenulispora acidiphila DSM
           44928]
          Length = 496

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/358 (10%), Positives = 88/358 (24%), Gaps = 51/358 (14%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +    ++  ++ +       S + + ++  QI+   M A G+  V+  LG + L      
Sbjct: 126 VVAALIIIWIVFYALNSTFLSAQNLSNLSQQIVGTGMIALGIVFVL-LLGEIDLAAGSVS 184

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A  + +     G++ +L + ++       G + G    +       +          
Sbjct: 185 GLAAAVFAVESVNNGVNQYLALLLALATGAGTGFVHGFFFARIGVPAFVVTLAGNLGWNG 244

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY--------- 185
            +L                    +     +    +     + V+Y +   Y         
Sbjct: 245 LMLNILGSTGTVNLPNNGIVSKLYNTIYGQLAAAYGAAIIAVVLYALVALYGRARRVRAG 304

Query: 186 -----------------------------------VLLGMCFLSASIILWLRRTAISNAW 210
                                                L            LRRT      
Sbjct: 305 IPAPPIGEIAARVVLLAIVAFLTAYVFNQYKGLPLAPLIFLIFIVVGDFILRRTVYGRRI 364

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             +  N +A      ++ F +L+ F +S     + G F A   +  S      +  +  I
Sbjct: 365 FAVGGNIEAARRAGISVPFIRLTVFMISGLMAAVGGLFLAGQIESASQTSGGGNLLLNAI 424

Query: 271 SIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           +  ++      GG            ++  +               +            
Sbjct: 425 AAAVIGGTSLFGGRGKTWSALLGALVIGSIQSGMNIQGLSNSIQFMVTGAVLLAAVVI 482


>gi|160881392|ref|YP_001560360.1| inner-membrane translocator [Clostridium phytofermentans ISDg]
 gi|160430058|gb|ABX43621.1| inner-membrane translocator [Clostridium phytofermentans ISDg]
          Length = 463

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 47/344 (13%), Positives = 105/344 (30%), Gaps = 28/344 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYV-------------MFAWGLSIVVGS 62
            LLA+V  L+   F+  + S          +L                +   GL++    
Sbjct: 20  ALLAIVLGLIFGFFIMLSASPANAIDGFHMVLTGGLKRIGDVFYFATPILMTGLAVGFAF 79

Query: 63  -LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
            +GL ++     + +G Y  + +G  + L   +   V  +     GM+ G+    F+   
Sbjct: 80  KMGLFNIGASGQFTMGMYFSLYVGFMWDLPANIHWFVCILAGMVGGMLWGVIPGLFKAFL 139

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                +         +     +  GK+ +YV+           + I       S V   I
Sbjct: 140 NVNEVITSIMFNYIGMFLVDMLIMGKSKMYVSTMARTEYLPASAQIPSLGIKGSSVNVSI 199

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
           +M   +         + + L +T      +    N+ A            +    ++ A 
Sbjct: 200 YMAIGIA------ILLYIVLNKTTFGYELKATGYNKYASDYAGMNGKKNIVLTMVIAGAL 253

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVIS------IVILGGMTSLSKIAKATAILIGVV 295
            G+ GAF   +   I+     +    ++ +       V L G +S   I  +   +  + 
Sbjct: 254 AGLGGAFSILAPSTIAGSSMTYEPINVIAATGFNGIAVALLGNSSPIGIIFSAIFISHIQ 313

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL--FLVILMRSH 337
                   Y +   +       + + +   + +   +V   +  
Sbjct: 314 RGGTLTALYGYKPEIIDIVISVIIYFSAFAMLMNHMVVAFFKRK 357


>gi|254245662|ref|ZP_04938983.1| hypothetical protein BCPG_00377 [Burkholderia cenocepacia PC184]
 gi|124870438|gb|EAY62154.1| hypothetical protein BCPG_00377 [Burkholderia cenocepacia PC184]
          Length = 311

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 101/312 (32%), Gaps = 22/312 (7%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +     L+  M + GL+++    G+L+      Y +GAY    + +      W  + ++ 
Sbjct: 10  NGLSYGLLLFMLSAGLTLIFSVQGVLNFAHASFYMLGAYVGYSIAA--WAGFWPALVLAP 67

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +  G  G       L+        + L+++     ++ +   +  G A +       F G
Sbjct: 68  LAVGLLGAGCERALLRRVQTRGHTSELLLTFGLAYLIGEGAKLAWGLAPLPAPVPPLFDG 127

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             V             +    +  +++     +  ++ + LR + I    R    ++ A 
Sbjct: 128 APVT---------VFGLALPRYRLFMMAMSTTMLVALGVLLRASRIGLVVRAALTHRAAV 178

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +L   +     + F   +A   +AG   A     +       +   +V ++V++GG+ S
Sbjct: 179 EALGYDVPRVMTALFGAGTALAALAGVIGAPLA--VIEPALAETVGSVVFAVVVIGGLGS 236

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM------ 334
           L     A+  +          +    +       +       + +  L  ++        
Sbjct: 237 LGGAFVASLAVGFAQTFAAASDTSLRDLAQWTGIALPDSVAAVSIAQLAPLVPYLLLVVV 296

Query: 335 ---RSHSLLRLR 343
              R   L   R
Sbjct: 297 LVARPRGLFGER 308


>gi|331695907|ref|YP_004332146.1| ABC transporter integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326950596|gb|AEA24293.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 288

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 82/300 (27%), Gaps = 29/300 (9%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +   IY + A G +++  + G ++        +G Y   +        +        + 
Sbjct: 12  LVTGSIYGLIATGYAVLYTATGFVNFALGAQAMLGGYLAYVYFPAVPQWV-----RIVIS 66

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
                ++  +            A L    +   + I ++ I    AG          G T
Sbjct: 67  LVVGAVVSVVSWNLLYKWAARRAMLAAVIMSFALAIVFEEIIRLSAGGLNVPAPSPFGRT 126

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
           V  L           +  +        +  L          +    A R +  + +    
Sbjct: 127 VFQLGAVTISAHQLAVVVVSAVLFTGLVVMLG---------SKRGAAVRAMFADAETAEV 177

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           L           FAVS  F  +AG   A             +  +I     ILGG+  + 
Sbjct: 178 LGIRTARLTTILFAVSGVFAAVAGILAAPLLTL--SPYMGLNLALIGFVGAILGGLGRIG 235

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                + +L  +     G     F              T L+     LV+++R   LL  
Sbjct: 236 TAIAGSILLGLLEAFFAGYVSADF-------------RTALVYAVFVLVLVIRPAGLLGR 282


>gi|254512160|ref|ZP_05124227.1| inner-membrane translocator [Rhodobacteraceae bacterium KLH11]
 gi|221535871|gb|EEE38859.1| inner-membrane translocator [Rhodobacteraceae bacterium KLH11]
          Length = 374

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 95/308 (30%), Gaps = 23/308 (7%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            ++  +AV    LLF F     + + + +  +    +++ A G  +++   G   L+   
Sbjct: 32  GMVGTVAVFTFFLLFAFDSGMFNAQGMMNWSVVSAQFMIIAVGACLLM-IAGEFDLSVGS 90

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK--FRGDYLAIATLIMS 130
                     I     G  +W+ I V+  ++ A G + G   ++       + +A L + 
Sbjct: 91  MIGFSGMMIAIFSVTLGWPVWMAIIVTFAMAIAIGGLNGWIVIRTGLPSFIVTLAFLFIL 150

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY------ 184
             F   L +         G+  A    +L       I    F        I ++      
Sbjct: 151 RGFTIFLPQVIERKTIIGGVKDAAEGDWLAPIFGGKILQGLFHWLGDAGIIAVFERGTRA 210

Query: 185 ---------YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAF 235
                     +++    L     + L +T   N       + +A  +    +   K+  F
Sbjct: 211 GQPVVDGVPMLIVWAIVLIIFGHVLLTKTKFGNWIFASGGDAEAARNSGVPVNKVKILMF 270

Query: 236 AVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAI 290
             ++    +              D     E   +I++VI      GG  S+   A    I
Sbjct: 271 MFTAFCATVFAVCQVMEFGSAGADRGLLKEFEAIIAVVIGGALLTGGYGSVLGAALGALI 330

Query: 291 LIGVVELC 298
              V +  
Sbjct: 331 FGVVQQGL 338


>gi|83311972|ref|YP_422236.1| branched chain amino acid ABC transporter [Magnetospirillum
           magneticum AMB-1]
 gi|82946813|dbj|BAE51677.1| Branched-chain amino acid ABC-type transport system
           [Magnetospirillum magneticum AMB-1]
          Length = 286

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 95/303 (31%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     L+  + A GL+++ G +G+++L     Y +GAY             WL    
Sbjct: 10  VLNGVQYGLLLFLVASGLTLIFGIMGIINLAHGAFYMLGAYLAY----------WLARTT 59

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            ++ +     +    ++ +  + L + TL   +    +L+ +  I        +      
Sbjct: 60  GSLGAAVLLSLPIAAAIGYGIEALLVRTLYRRDHLDQVLLTYGLILIFNEATRMIWGADV 119

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  V + + +    +  + Y ++   +      L+  + L + RT      R    N+ 
Sbjct: 120 HGVAVPAALNWSIRLTDTLSYPVYRLMLSGVCAVLAVGMYLVITRTRFGMWVRAGASNRD 179

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       FA+ +A  G+AGA                     V+ ++    +
Sbjct: 180 MVAALGINVKLLFGVVFALGAALAGLAGAISTPITSVAPGMGDSVLILCFVVVVIGG--V 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+        ++                             +  +   +  V+L +   
Sbjct: 238 GSIKGAFLGAMLIGLADTFGKVFA--------------PDFASFTVYGVMAAVLLWKPRG 283

Query: 339 LLR 341
           L  
Sbjct: 284 LFS 286


>gi|332365836|gb|EGJ43593.1| ribose ABC superfamily ATP binding cassette transporter, membrane
           protein [Streptococcus sanguinis SK355]
          Length = 327

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 48/330 (14%), Positives = 110/330 (33%), Gaps = 26/330 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLG----ATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           ++L K   +  L+A++  +++F F      + +S   + S+          A G++ V+ 
Sbjct: 9   MKLEKTVGLQKLIALIALVVIFAFFAISSESFRSFDTVVSILDASYYIGFLAIGVTFVI- 67

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G + L+        A    +L ++ G  +WL +    +I G  G++ G+   KF    
Sbjct: 68  ITGGIDLSIGTVMMCSAIIGGVLHTKMGWPLWLSLLAILVIGGLFGLLNGIMVAKFGLPP 127

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
                           +    I+ G + I    +             +     +   +  
Sbjct: 128 FIAT------------LGTMMISRGLSSIVSNVQSVTFPLRGTGEGWYKDLFRTQDNFPT 175

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +    + +  ++    + L +T I      I  N++A       ++  +  A+ +    
Sbjct: 176 GL----IVLVLVAVLAAVVLNKTKIGRYIFAIGSNKEATRLSGVNVVKWEGMAYVIGGLS 231

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVE 296
            G+A   +AA+   I P      E   +  +V+      GG+ S+        I+  +  
Sbjct: 232 AGLAAVAYAATYSTILPGTGNGMELDAIAGVVVGGTSLAGGVGSVIGTIIGVFIMSVLKI 291

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
               ++      L        +     + I
Sbjct: 292 GLPYIDLQPHYQLFITGFVVIIAVYFDIFI 321


>gi|239624364|ref|ZP_04667395.1| ribose ABC transporter permease [Clostridiales bacterium
           1_7_47_FAA]
 gi|239520750|gb|EEQ60616.1| ribose ABC transporter permease [Clostridiales bacterium 1_7_47FAA]
          Length = 331

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 89/307 (28%), Gaps = 37/307 (12%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
           +  +   I ++G Q  I  + A G+++V+   G + L+    +A   +  +   +   + 
Sbjct: 35  SFLTINNISNVGRQATIRGLLACGMALVI-MSGSIDLSVSTLFAFSGFLSLYFSNYSAVL 93

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            +++    A   G     + + +          + L +  I   +               
Sbjct: 94  AFVIPMAVAAGVGFINATLIVKAGFHPWIVTIASQLGIQGILLMM--------------- 138

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                    T     I         +I+  ++   L+          + L++ +      
Sbjct: 139 -----TRGDTYKAVHISPGFATFGKIIFFRYISIYLVIFILTFVVFAVLLKKRSAFRNIY 193

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            +  N++A   +   +   +L A  + S    +AG    +  +   P      E   + +
Sbjct: 194 AVGGNEEAATMMGINVYKTRLLAHMLCSMLACLAGILLVSRTEAAYPLAGTSYEMYAIAA 253

Query: 272 IV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
                  + GG   +        IL  +  +                    +    +  +
Sbjct: 254 CALGGIYLTGGRGKIMGAFAGAWILGFLNNIFN-----------MQSYVNPLWEQVVTGL 302

Query: 327 ALFLVIL 333
            L +V+ 
Sbjct: 303 LLIIVVF 309


>gi|332083590|gb|EGI88810.1| ribose transport system permease protein rbsC [Shigella boydii
           5216-82]
          Length = 311

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/313 (9%), Positives = 93/313 (29%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + ++   +         ++  + ++  Q  I ++ A G++ ++   G L L+     
Sbjct: 10  ILPILILIVAVFGFIAPNFFTESNLLNITRQASINIVLAAGMTFII-LTGGLDLSVGSIL 68

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A + +++      ++  +     +          L +      ++       +    
Sbjct: 69  GTTAVAAMVVSLSPEFAMLSIPAALMLGLLLGLFNGALVAFAGLPPFIVTLGTYTALRGA 128

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+                           +     F      Y   + ++++    + 
Sbjct: 129 AYLL---------------------ADGTTVINSNINFEWIGNNYLGPVPWLVVIALAVI 167

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 LRRT +      +  N +A       +    L  + +S    G+ G   A+   
Sbjct: 168 VLCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGIMSASRLY 227

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             + ++    E   + ++++     +GG+ +++       I+  +      M   YF  L
Sbjct: 228 SANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQL 287

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 288 VIKGAVIIIAVLI 300


>gi|313889191|ref|ZP_07822845.1| branched-chain amino acid ABC transporter, permease protein
           [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312844745|gb|EFR32152.1| branched-chain amino acid ABC transporter, permease protein
           [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 318

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/273 (12%), Positives = 75/273 (27%), Gaps = 8/273 (2%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G++++      AIGA    I+G   G      +           +             +
Sbjct: 35  AGVVNIGLEGMMAIGAVVGSIVGYYLGNPWLAFLCGGLGGMLIALLHAIATVNFAADHVV 94

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
           +   + +      + +             +           +             +  +F
Sbjct: 95  SGIAINLIGPGLALFLCRLFFDGAAMSKSIDYENKLPVLFGKVFKSGGGKGIMRFLDIVF 154

Query: 183 MYYVLLGMCFLSASIILWL-RRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             Y  + + F+   ++ ++  +T +    R + +  KA  +L       K      S   
Sbjct: 155 SQYASVYLAFVLVFVVYFILYKTRLGLRIRAVGEYPKAAETLGVDAYKIKYICVLASGFL 214

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGM 301
            G+ GA  + +      +     +  I ++ VI GG         A  +      L    
Sbjct: 215 AGLGGASMSLAVVSNYRETLISGQGFIALAAVIFGGW-KPQGAMLACLLFGFAQGL---- 269

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
               F   +      N+       I L ++I+ 
Sbjct: 270 --SVFLGSIGIKIDTNLLSMIPYAITLIVLIIF 300


>gi|167770957|ref|ZP_02443010.1| hypothetical protein ANACOL_02311 [Anaerotruncus colihominis DSM
           17241]
 gi|167666997|gb|EDS11127.1| hypothetical protein ANACOL_02311 [Anaerotruncus colihominis DSM
           17241]
          Length = 345

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/324 (12%), Positives = 95/324 (29%), Gaps = 28/324 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             +++ +L L+ ++  ++         +   + +  I  +   +  +G+ +V+  LG + 
Sbjct: 20  FAQWETLLVLIFLLVNIININLSPYYLNYTNLMNSMINFMDKGLMVFGIMMVL-ILGEID 78

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++      + A +        G+ +   + V+ ++   CG   G+    F      I TL
Sbjct: 79  ISIASIITLSACTAG-WAGELGVPLAGCVLVALLVGALCGAFNGVLLAAFPELNSTIVTL 137

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               +++ +                                  +           +  +L
Sbjct: 138 GTQILYRGLAYMLLE-------------------DESLKTYAKQLSDLAWERIFGLPVIL 178

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +    LS   +  + R A       +  N  A +         K+  F +S      AG 
Sbjct: 179 VAFIILSVIFMFVIHRMAFGRRLYALGSNYTASYFSGIRTSRIKIMVFTISGLCASFAGL 238

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
           F AA    +          + VI++ ILGG       + +         +          
Sbjct: 239 FLAAKLASV-RASIAQGYEMEVIAMAILGG------ASPSGGKGRVGGVIVGVFTIGLIR 291

Query: 308 SLLKFDCSFNMRHTTLMVIALFLV 331
                          ++ I L +V
Sbjct: 292 YGTGLVNVSAETLKVIIGILLIVV 315


>gi|218781117|ref|YP_002432435.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
 gi|218762501|gb|ACL04967.1| inner-membrane translocator [Desulfatibacillum alkenivorans AK-01]
          Length = 316

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 51/323 (15%), Positives = 115/323 (35%), Gaps = 27/323 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
             + +  I  L+  M + GL+++ G + +L+      Y IGAY          +     +
Sbjct: 7   FSLLNTLIYGLLLFMLSSGLTLIFGLMNVLNFAHASFYMIGAYFAY--QVSLYIGFIPAL 64

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            ++ +  G  GMI+    L+    +  +A L+ +     +  +   +  G+         
Sbjct: 65  FLAPLGVGILGMIVERYGLRKVHAHGHVAELLFTFGLFFLFNEVVILIWGRN-------- 116

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
             +   +   + F  F      +  +  ++LL    +   + L + RT I    +    +
Sbjct: 117 -PVDYQIPGFLDFPLFTLFGADFSAYKGFMLLISIAMFIGMYLVINRTRIGLVIQASLTH 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
            +    L   +    +  F   +A  G+AG         ++      +   IV  ++++G
Sbjct: 176 PEMVSVLGHNVPAVFMYVFGAGAALAGLAGVIGGNFL--VTEPGMAMALGPIVFVVIVVG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNM--------------RHTT 322
           GM SL+    ++ +L G+     GMN+   + L  F                        
Sbjct: 234 GMGSLTGAFISSLLLAGLQTFAVGMNYSLADFLGHFGIQAASEGFWGDIVRIEIANTRAM 293

Query: 323 LMVIALFLVILMRSHSLLRLRTP 345
           +  + +  +++ R   L+ +R  
Sbjct: 294 IPFLFMIFMLIFRPKGLMGVREE 316


>gi|327393789|dbj|BAK11211.1| inner membrane ABC transporter permease protein YtfT [Pantoea
           ananatis AJ13355]
          Length = 338

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 91/298 (30%), Gaps = 27/298 (9%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
             +  +     + A G+++V+   G + L+     AI   +   L        ++ I V+
Sbjct: 57  IDIINRAAPVALLAIGMTLVIA-TGGIDLSVGAVMAIAGATAATLTVAGHGVPFI-IMVT 114

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                ACG+  G+     R        ++M                  AG  +A  +   
Sbjct: 115 LASGLACGIWNGILVALLRIQPFVATLILM-----------------VAGRGIAQLITQG 157

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                +      F +  +       ++ + +      + L  R+TA+      +  N +A
Sbjct: 158 QIVTFNNDSLGWFGNGALWLLPVPVWITVAVA---LLVWLLARKTALGLFIEAVGINLRA 214

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +         +S +A+S     +AG   AA       +       +  I  V++GG  
Sbjct: 215 ARNAGVNGWLVVMSTYAISGLCAAVAGLIVAADIRGADANNAGLWLELDAILAVVIGGA- 273

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
                       I +  +   +       +L       +      ++ + +++L    
Sbjct: 274 ----SLMGGRFNIVLSLIGALIIQSMNTGILLSGFPPELNQVVKAIVVMCVLLLQSPR 327


>gi|259415613|ref|ZP_05739534.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Silicibacter sp. TrichCH4B]
 gi|259348843|gb|EEW60605.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Silicibacter sp. TrichCH4B]
          Length = 322

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 89/321 (27%), Gaps = 28/321 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L+    +  +  +V  +L+        S   I ++  Q+ I  + A G++ V+   G + 
Sbjct: 20  LHSPLALPLIGLIVVSILMGFASENFFSVSNIMNVLRQVSIVGILAVGMTFVI-LTGGID 78

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+     A+       L     +  W+ +     +    G+  G      R        +
Sbjct: 79  LSVGAVMALSGTLAAGLMVNMAMPGWVGLLAGLGVGVGLGLFNGAMVAWGRMPA-----I 133

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I++     I      + +G   I                          +     +   +
Sbjct: 134 IVTLATMGIARGLGLLYSGGYPISGIP---------------SWISWFGIGRIGIVPVPV 178

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           + M  + A   + L+RTA       I  N+ A         F KL+ + +S      A  
Sbjct: 179 IAMVVIYALAWVLLQRTAFGRHVYAIGGNELAAKLSGVKTQFVKLTVYGISGLTSAFAAL 238

Query: 248 FFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGM 301
                              +  I+ V+L      GG   +        +L  +      M
Sbjct: 239 ILTGRLMS-GQPNAGVGFELDAIAAVVLGGTAIAGGRGLILGTLIGAVLLGILNNGLNLM 297

Query: 302 NFYYFNSLLKFDCSFNMRHTT 322
               +   +       +    
Sbjct: 298 GINPYLQDVIKGLIILLAIYI 318


>gi|171315890|ref|ZP_02905120.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MEX-5]
 gi|171098986|gb|EDT43774.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MEX-5]
          Length = 362

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 91/309 (29%), Gaps = 27/309 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILI----YVMFAWGL 56
           M+ F  RL     +  ++ +V    LF F     +  +   +   +L+     ++ A G+
Sbjct: 1   MNRFLARLADPRTLPIVVTIVLFAALFGFGSVMYTGFFSMQVLTGLLVDNAFLLIVAIGM 60

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
           + V+   G + L+     A+      +   R    +W ++P+  ++    G  MG     
Sbjct: 61  TFVI-VSGGIDLSVGSVVALTTIFCAVGAERLHWPVWAIVPLVLVLGALYGAAMGALIHY 119

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
           FR     +    M        +                 +     T+           S 
Sbjct: 120 FRLQPFIVTLAGMFLARGACFL-----------------ITTQSITINEPTFHALAGVSV 162

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
            I    +    L       + +     T        I  N+++   +   +   K+  +A
Sbjct: 163 PIAGGTLSAGALIALATLVAALYVAHFTRFGRNVYAIGGNERSALLMGLPVARTKVGVYA 222

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAIL 291
           +S     + G  F            +  E   + + VI      GG+  +        IL
Sbjct: 223 LSGFCSALGGVVFTLYVLSGYGLQAQGMELDAIAATVIGGTLLTGGVGYVIGSVFGVGIL 282

Query: 292 IGVVELCCG 300
             +  L   
Sbjct: 283 GTIQVLITF 291


>gi|270308216|ref|YP_003330274.1| branched-chain amino acid ABC transporter, permease protein
           [Dehalococcoides sp. VS]
 gi|270154108|gb|ACZ61946.1| branched-chain amino acid ABC transporter, permease protein
           [Dehalococcoides sp. VS]
          Length = 294

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 85/269 (31%), Gaps = 14/269 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +YI +     L+Y + A G +++  S  + +L       I ++    + ++ G+  WL  
Sbjct: 6   QYIITGITVGLVYSLIALGFTLIWKSSSVANLALGQMVLICSWFTYSMLAQVGMPFWLGF 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               + + A G +M    L+       ++ + ++      L                   
Sbjct: 66  ICVVLFALALGWLMERIILRPLIGQPILSLVTVTLGVGFFLEGVVSFIW----------- 114

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +  +           +      +       L A + L+ +   +  A R   D+
Sbjct: 115 PQSVAALPKIFPETPIHIGSAVISQEYVWAAGISLLLFAMLTLFFKYHKMGVAMRATADD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           Q+A  +    +      ++ ++     + G   ++        +      I   S+VILG
Sbjct: 175 QQAVQACGIPVTRIFSLSWMLAIVLAAVGGVLMSS---IGGITLGLVETGIKAFSVVILG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G+ S      A  I+     L  G     
Sbjct: 232 GLDSFLGAMIAGPIIGLAENLGGGYLTSL 260


>gi|254361430|ref|ZP_04977571.1| galactoside ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica PHL213]
 gi|153092936|gb|EDN73967.1| galactoside ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica PHL213]
          Length = 336

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/297 (9%), Positives = 81/297 (27%), Gaps = 8/297 (2%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            +  S +   ++  Q  + ++ A G++ ++ + G   L+      + A     L      
Sbjct: 34  PSFLSLRNFSNILSQSSVRLIIALGVAGLIVTQG-TDLSAGRQVGLAAVISATLLQSMEN 92

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              +   +S +      + +             +   +    F   +     +    +  
Sbjct: 93  MNKVFPNLSEIPIPVVVLTVCAIGAVIGLFNGFVVAYLNVTPFIATMGTMIIVYGINSLY 152

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
           Y A     +         F +    F  + +   Y+ +     +  +     +T      
Sbjct: 153 YDAVGSSPIAGFSDDFSTFAQGFFRFGDFRLS--YITIYAVIATIIMWTLWNKTRFGKNV 210

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N +A       +    +  + +S  F    G   A      + ++    E   + 
Sbjct: 211 FAIGGNPEAARVSGVNVPLNLMGIYMLSGIFYAFGGMLEAGRIGSATNNLGFMYEMDAIA 270

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + V+      GG+ ++  +     I   +      +    +   +       +    
Sbjct: 271 ACVVGGVSFAGGVGTIIGVVTGVLIFTVINYGLTYIGVNPYWQYIIKGGIIILAVAI 327


>gi|153010164|ref|YP_001371378.1| monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC
           49188]
 gi|151562052|gb|ABS15549.1| Monosaccharide-transporting ATPase [Ochrobactrum anthropi ATCC
           49188]
          Length = 325

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 94/315 (29%), Gaps = 13/315 (4%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I+  +     +++ L   A  S   I  +    ++  + A G+ +V+   G + ++   
Sbjct: 9   FIIACVLFAAMVIIGLINPAFWSLDNIFGLLRSNVVIGIMALGVLLVM-ISGGIDVSFTA 67

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
                 Y  V      G    L+  V+A + G          +        I TL    I
Sbjct: 68  FAIAAMYLTVRAMVYLGYDGVLIPFVAATLIGLLLGAFNGFIIHRFKMIPLIVTLGTGSI 127

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            + +++       G  G    +        +          ++       +  + L    
Sbjct: 128 VRGLVL-------GLVGTSTVNINKMPKELIEFGKTDVVSLTNAAGTAFSLTAMFLVYLA 180

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L+  I L L  T I  +      + +A   +           + V+ A  G AG   ++ 
Sbjct: 181 LALLIHLILNYTMIGRSVYAYGGSPEAAKRVGFNTRRTIFFVYCVAGALAGFAGLLHSSM 240

Query: 253 RDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
               +P  F   E  ++ ++V     I GG  ++        +L+ V      M      
Sbjct: 241 IWLANPRDFVGLELDVIAAVVLGGASIFGGRGTVLGTLMGVFMLVMVKNSLIIMKVDTTW 300

Query: 308 SLLKFDCSFNMRHTT 322
             +       +    
Sbjct: 301 QRVVVGLIIIVATAI 315


>gi|110677874|ref|YP_680881.1| sugar ABC transporter, permease protein [Roseobacter denitrificans
           OCh 114]
 gi|109453990|gb|ABG30195.1| sugar ABC transporter, permease protein [Roseobacter denitrificans
           OCh 114]
          Length = 366

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 77/304 (25%), Gaps = 20/304 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  + +V    L     A  +     +         + A G ++++   G   L+     
Sbjct: 29  IAGVILVTVFFLITADPAMFTLAGFMNFMSPAAQLGILAIGAALLM-VGGEFDLSVGSMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A     +      +GL + + IP + + + A G   G   L        +    +     
Sbjct: 88  AFTGLFFGACVVTFGLPLIIAIPATLIFAAAVGACNGQIVLATGLPSFIVTLAFLFIFRG 147

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS--------------SFVIYE 180
             L+  K  T+G   +                                      +     
Sbjct: 148 LSLVGLKWATDGSTQLRGVRDATENDWLTPIFSGDAFPGFFTKLAEMGMIDTFRNGTPKV 207

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             +   ++    ++      L++T   N       +  A  +    +   KL  F V++ 
Sbjct: 208 TGIPVEIIWFVIIALLATYVLQKTPFGNWIFASGGDANAASNSGVPVKRVKLILFMVTAT 267

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVV 295
              +                    E   +I+ VI      GG  S         I   V+
Sbjct: 268 CAALVAIITVLDSGSTDARRGFQKEFEAIIAAVIGGCLLTGGYGSAIGAFFGAIIFGMVL 327

Query: 296 ELCC 299
               
Sbjct: 328 IGLT 331


>gi|113460201|ref|YP_718258.1| sugar ABC transporter permease [Haemophilus somnus 129PT]
 gi|112822244|gb|ABI24333.1| autoinducer 2 ABC transporter membrane protein [Haemophilus somnus
           129PT]
          Length = 332

 Score = 49.9 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 93/303 (30%), Gaps = 27/303 (8%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
            S + +  +     I  + A G + V+     + ++      + A    +          
Sbjct: 30  FSLQTLMMIFNSTQILALLAIGATFVI-LTRNIDVSVGSIMGLSAVVVGL---------V 79

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           L    S +I+    ++ G+ +    G  +++  +         L  +K +     G    
Sbjct: 80  LNSGYSLLIACTITLLCGIIAGGVNGVLVSVLRIPAIVATLGTLGLYKGLMLVLTGGKWI 139

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
           + L     T+   I     P              L + FL      +   T I   +  +
Sbjct: 140 EGLPHSLKTLSEEIVLGFSPIG------------LAVIFLILVTYYFFTHTYIGRCFYAV 187

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
            DN +    L   +   ++SAFAV+     +AG  FA+    +        E   + + V
Sbjct: 188 GDNLQGALQLGVKVNVIRISAFAVNGLMAALAGIIFASQIGFVPNSTGNGLEMKAIAACV 247

Query: 274 I-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIAL 328
           +     LGG  ++         LI +  +   M    + +                 I +
Sbjct: 248 LGGISLLGGAGNILGAVLGAYFLIQIDTILVLMKVPAYWNNFVAGVVLLAVLVFDGRIRV 307

Query: 329 FLV 331
            +V
Sbjct: 308 MIV 310


>gi|302555686|ref|ZP_07308028.1| sugar ABC transporter integral membrane subunit [Streptomyces
           viridochromogenes DSM 40736]
 gi|302473304|gb|EFL36397.1| sugar ABC transporter integral membrane subunit [Streptomyces
           viridochromogenes DSM 40736]
          Length = 342

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 76/296 (25%), Gaps = 19/296 (6%)

Query: 32  ATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLS 91
           +  +++ + S+        M     S+V+   G   L+      I      +L      S
Sbjct: 51  SFLTERNLISILGASAALAMVVLAESLVL-ITGKFDLSLESVVGIAPAVGALLVLPAAQS 109

Query: 92  IWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
            W     +A+   A  +             +             +++    +     G  
Sbjct: 110 GWGTELPAALALPAVLVAGAAVGAFNGVLVVKFKLNAFIVTLAILIVLRGLLVGATKGKT 169

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
           +        +   +               + +   +  + F  A ++L   R  +  A  
Sbjct: 170 LFGMPDSFYSLATT-----------TFLTVPLSVWVAALAFSVAGLVLKYHR--VGRALY 216

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
            I  N  A  +    +    L  F V+     + G         IS +  +     +  +
Sbjct: 217 AIGGNADAARAAGIRVERVMLGVFVVAGVLAAVGGIMQTGYVGAISANQGQNMIFTVFAA 276

Query: 272 IVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            VI      GG  ++        +L  V  L        F     +     +    
Sbjct: 277 AVIGGIALDGGKGTMFGALTGVLLLGVVQNLLTLAQVPSFWIQAIYGGIILVALMI 332


>gi|238797094|ref|ZP_04640597.1| Xylose transport system permease protein xylH [Yersinia mollaretii
           ATCC 43969]
 gi|238719139|gb|EEQ10952.1| Xylose transport system permease protein xylH [Yersinia mollaretii
           ATCC 43969]
          Length = 362

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 54/355 (15%), Positives = 105/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L  +A++     F   GA  S + I ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 1   MLAAIAIIMLFFTFTTEGAYLSARNISNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 59

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      I     G  + L I V+  +    G   G      +               
Sbjct: 60  MGLLGGIAAIFDVWLGWPLPLTIVVTLGLGLVLGAWNGWWVAYRKVPSFIVTLAGMLAFR 119

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+ +     +   + R  +   
Sbjct: 120 GILIGITNGTTVSPTSSAMSQIGQSYLPNGLGFGIGAIGLMLFVAWQWHRRSHRIRLGLP 179

Query: 171 RFPSSFVIYEIFMYYVL------------------LGMCFLSASIILWLRRTAISNAWRT 212
                  +    +  ++                  L +  L  + I    RTA       
Sbjct: 180 VAAPQGDVTRQSITAIIVLGAIYLLNDYRGVPTPVLILTALMLAGIFMATRTAFGRRIYA 239

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N  A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 240 IGGNIDAARLSGVNVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 299

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 300 VIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGAILLLAVWM 354


>gi|126454007|ref|YP_001066134.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|167902808|ref|ZP_02490013.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|217421949|ref|ZP_03453453.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
 gi|242316619|ref|ZP_04815635.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
 gi|254197979|ref|ZP_04904401.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|254297726|ref|ZP_04965179.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|126227649|gb|ABN91189.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|157807698|gb|EDO84868.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|169654720|gb|EDS87413.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|217395691|gb|EEC35709.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
 gi|242139858|gb|EES26260.1| putative ribose ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
          Length = 337

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 86/300 (28%), Gaps = 27/300 (9%)

Query: 28  LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSR 87
           +      +     ++  QI   V+ + G++ V+   G + L+     A+ A    +   R
Sbjct: 50  VLSSHFLTYDTFSTIANQIPDLVVLSVGMTFVLIIAG-IDLSVGSVLALAASVVSVAALR 108

Query: 88  YGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGK 147
                          + A G + G  ++ +R       +L + E  + +  +        
Sbjct: 109 GQWPPLPAALAGVAAAAATGTLTGAVTVGWRIPSFI-VSLGVLEAARGVAYQLTNSRTAY 167

Query: 148 AGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAIS 207
            G                      F        + +    L    +       L RT   
Sbjct: 168 IGDA--------------------FDFLSNPIALGISPAFLIAVAVMIVAQFVLARTVFG 207

Query: 208 NAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENI 267
                I  N++A           K+  FA+  A  G+A  F  +  +   P+     E  
Sbjct: 208 RYLVGIGTNEEAVRLAGVNPRPYKIIVFALMGALAGLAALFQISRLEAADPNAGAGLELQ 267

Query: 268 IVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           ++ ++VI     +GG  S+       +I+  +      +        +       +    
Sbjct: 268 VIAAVVIGGTSLMGGRGSVVSTFFGVSIISVLAAGLAQIGANEPTKRIITGAVIVVAVVL 327


>gi|327194568|gb|EGE61421.1| xylose ABC transporter, permease protein [Rhizobium etli CNPAF512]
          Length = 403

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/349 (11%), Positives = 82/349 (23%), Gaps = 61/349 (17%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +   L  +         G       + ++ +Q    V+ A G+ ++V   G + L+
Sbjct: 26  REYGMFIALIAIMVFFQISTGGVLFRPLNLTNIILQNSFIVIMALGM-LLVIVAGHIDLS 84

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                        ++  ++ ++  L   V   +    G + G      +     +    M
Sbjct: 85  VGSVVGFIGAIAGVMTVQWHMNYVLAGVVCLALGALVGGLQGYFVAYHKIPSFIVTLAGM 144

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                  L        G +          +       +      +S  +    +  V L 
Sbjct: 145 LVFRGLTLFVMTASGTGTSIGPFPPEFQLISIGFLPNLLDTGGINSTSMILTVVGAVTLF 204

Query: 190 MCFLS-----------------------------------------------------AS 196
                                                                     A+
Sbjct: 205 YMAWRKRLSNEKHGNDVEPMGFFLVQNIVVAVAILALGYQLSIYRGFPNVLVVMLVLVAA 264

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
                RRT I      +  N+KA               FA      G+AG   A   +  
Sbjct: 265 YAFITRRTTIGRRIYAMGGNEKATKLSGINTERLTFLTFANMGLLAGLAGLIVALRLNSA 324

Query: 257 SPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCC 299
           +     F   + VI+   +      GG+  ++       I+  +     
Sbjct: 325 TAKG-GFGLELDVIAACFIGGASAQGGVGKVTGAVIGALIMGIMNNGMS 372


>gi|320536480|ref|ZP_08036514.1| amino acid or sugar ABC transport system, permease protein
           [Treponema phagedenis F0421]
 gi|320146689|gb|EFW38271.1| amino acid or sugar ABC transport system, permease protein
           [Treponema phagedenis F0421]
          Length = 334

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/331 (11%), Positives = 92/331 (27%), Gaps = 25/331 (7%)

Query: 2   SIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
            I  +R  +    +    +V  ++  +      S + I ++  QI   ++   G S V+ 
Sbjct: 9   KIMEIRGMRQVLTVTAGLIVLCIVFGIMNPVFFSARNIANLLRQIAPILLVGIGQSFVL- 67

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G + L+      +       L S+    +      +A++      ++          +
Sbjct: 68  LTGNIDLSIGSVVGMSCMISATLMSKGVNPL------TAILITVFCCLLIGALNGLLVSF 121

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
             +   I +     I      I NG                             +    +
Sbjct: 122 CKLPPFIATLGTMTIARGIAQIVNGNYNTDSI-----------GEHAENFRDFFYYGKTL 170

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
            +Y  +     L   +  +L RT        I  N +A       +I   L A+ +S+  
Sbjct: 171 GLYNPIWIAFILWFILNFYLMRTKNGRHIYAIGSNYEAARLSGVNVIATTLKAYLISAFV 230

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS------LSKIAKATAILIGVV 295
             + G     +   +          +  ++  ++GG+++      L       +I   + 
Sbjct: 231 SCVVG-LITCATSGMGTMDSGNMYELYAVAASVIGGISTLGGQGLLLGTIVGASIWAVLQ 289

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
                         +       +     +++
Sbjct: 290 NGLQFAGAPVAIRNIVIGIIVIVSVLLDIIV 320


>gi|300786973|ref|YP_003767264.1| sugar ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299796487|gb|ADJ46862.1| permease component of ABC-type sugar transport system
           [Amycolatopsis mediterranei U32]
          Length = 324

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/321 (10%), Positives = 89/321 (27%), Gaps = 30/321 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L+ +       +   A  S     ++   +  + + A G  +++   G + L+    +
Sbjct: 18  ILLVTIAAGSYFTVTSAAFNSPDNYQTIAQYVAPWAIIAAGQVMLL-ICGEIDLSAGFVF 76

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +  +  ++        +WL +P + ++S   G++ GL               +   +  
Sbjct: 77  TLAPFLLMLFFVNGWP-LWLALPGAIVVSTLVGVVNGLIRTLLNIPSFITTLGMAFLLQG 135

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +LI       G         ++                              L    + 
Sbjct: 136 LVLIISNARPVGAPKDSWVVDVFGGARWTE----------------------FLWAAGVV 173

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + + L  T      +    N          +   K+  FA++S   G+AG        
Sbjct: 174 VVMQVVLSATRFGIHTQATGGNPVGAAESGIAVNRVKVVNFAITSTLAGLAGILQGTRVG 233

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
              P    F+     ++  ++GG        ++        +L  V +            
Sbjct: 234 SYDPTNGGFTTMFFAVASAVIGGTALLGGSGTVVGAFLGALLLGIVFDGFNLTGVSANAF 293

Query: 309 LLKFDCSFNMRHTTLMVIALF 329
            +    +  +     + + + 
Sbjct: 294 NIVLGAAILVAMVLNVTLIMV 314


>gi|293607750|ref|ZP_06690081.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292813888|gb|EFF73038.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 338

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 54/325 (16%), Positives = 115/325 (35%), Gaps = 28/325 (8%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           + V+  +     L    +  +  +  +  L Y + A G+S V+   G +S    +   I 
Sbjct: 3   VVVLSLVAALATLCLGYTLSWTITPIVIGLTYAIAALGVS-VMARAGQISFGHAMYSCIS 61

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGAC-GMIMGLPSLKFRGDYLAIATLIMSEIFQNI 136
           AY+   L      +  L++ ++ + +     +++GL  +++RG +  +  L +S +   +
Sbjct: 62  AYTVAFLARAMPGTDALVLILAGVAASFLAAIVIGLFVVRYRGIFFGMLNLALSMVLFAL 121

Query: 137 LIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSAS 196
           L K   +T G  G+ +           R              +E  +  + L +  + A 
Sbjct: 122 LGKLYTLTGGSDGMRIVRPAMAGVLMERE------------SFERALLVLTLVLSMVLAW 169

Query: 197 IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRI 256
            +    R+    A   I+ N+     L  +  F     + +S+  +G +GA  A  +  +
Sbjct: 170 WVQRYFRSGSGQALSAIKTNETRIEYLGFSAYFIMWKGYLLSAVVVGFSGAILALMQGLV 229

Query: 257 SPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSF 316
           +P++  +  +   + I IL                 G           +    L     F
Sbjct: 230 TPEIGSWLRSGEFVFITIL--------------GGAGHAAGAFLGAVGFETVKLVSAAYF 275

Query: 317 NMRHTTLMVIALFLVILMRSHSLLR 341
                 L+ + L LVI M     + 
Sbjct: 276 PGLWQFLLGLTLILVIFMFPTGFVG 300


>gi|227875323|ref|ZP_03993465.1| inner-membrane translocator [Mobiluncus mulieris ATCC 35243]
 gi|269978210|ref|ZP_06185160.1| inner-membrane translocator [Mobiluncus mulieris 28-1]
 gi|307700780|ref|ZP_07637805.1| branched-chain amino acid ABC transporter, permease protein
           [Mobiluncus mulieris FB024-16]
 gi|227844228|gb|EEJ54395.1| inner-membrane translocator [Mobiluncus mulieris ATCC 35243]
 gi|269933719|gb|EEZ90303.1| inner-membrane translocator [Mobiluncus mulieris 28-1]
 gi|307613775|gb|EFN93019.1| branched-chain amino acid ABC transporter, permease protein
           [Mobiluncus mulieris FB024-16]
          Length = 450

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 85/291 (29%), Gaps = 8/291 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +   + +  ++    +++     GL ++       +GA   V  G    L   L + V
Sbjct: 101 ITNSLTRSVPLILAGLSVALAF-RAGLFNIGAQGQLLVGAALGVWTGLNISLPYGLHLLV 159

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +++   G + G      +      A +  +E+   I++    +      +     +  
Sbjct: 160 AMLLAVLGGAVWGAVPGILK------ARVGANEVIVTIMMNSIAVFLTSYFLKSRVFIGN 213

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                 S I         +     ++   L     +  +   L R+      R    N  
Sbjct: 214 GYPGKSSTIPDTAAYPKLLGSAFNLHLGFLIALLAAVFVWWLLERSTFGFELRAAGANPN 273

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  +   ++         ++ A  G+AG   A   +R        S     I++ +L G 
Sbjct: 274 AARTAGISVNRVIALTMIIAGALAGLAGTGPALGTERFLSAGTAGSIGFDAITVALL-GA 332

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
           ++      A  +          M       +     S  +    +    L 
Sbjct: 333 STPLGTVLAGILFGAFASGASTMQAAAGIPVDIVSVSQAVIVLLIAAPPLI 383


>gi|190893013|ref|YP_001979555.1| sugar ABC transporter permease [Rhizobium etli CIAT 652]
 gi|190698292|gb|ACE92377.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           CIAT 652]
 gi|327190405|gb|EGE57501.1| putative sugar ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 332

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/316 (9%), Positives = 91/316 (28%), Gaps = 23/316 (7%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
              + +  ++  L L +   +  + K + ++   +    + A G+++V+   G + L+  
Sbjct: 25  TFWVLIAVILACLFLSVATDSFATAKNLYNITRNVTFVAIIALGMTLVI-ITGGIDLSVG 83

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               + +    +                 + +     ++          YL     +++ 
Sbjct: 84  SVLCLCSMVLAVTMHAGYG------IEIGIAAAIGTALVVGAFNGVMIAYLDFPPFVVTL 137

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
              ++      + +    ++     +     +     F    +  +   I        + 
Sbjct: 138 GMLSVARSLAMVASNNTVVFQFGPDHDKLLALGGGAWFLGIANPVLYMVILALLTGFVL- 196

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                     R T        I  N+ A       +   K++ + +S+   G+AG     
Sbjct: 197 ----------RWTRFGRYIFAIGGNEHAATLTGVPVRSIKVAVYMISALSAGIAGIVQTG 246

Query: 252 SRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
               ++ ++    E  ++ + VI      GG+ +        A++  +      +    F
Sbjct: 247 WLGAVTTNIGAGMELQVIAAAVIGGANLAGGVGTAFGALVGAALIEVIRNSLGLLGINAF 306

Query: 307 NSLLKFDCSFNMRHTT 322
                   +  +    
Sbjct: 307 WQGTFIGGAIVLAVLF 322


>gi|157372998|ref|YP_001480987.1| monosaccharide-transporting ATPase [Serratia proteamaculans 568]
 gi|157324762|gb|ABV43859.1| Monosaccharide-transporting ATPase [Serratia proteamaculans 568]
          Length = 340

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/324 (12%), Positives = 102/324 (31%), Gaps = 23/324 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
            +L     IL + ++V P    + +   +    +  +  +     + A G+++V+   G 
Sbjct: 24  TQLGALAVILLIDSLVAPNFFSIHIQDGRLFGSVIDIVNRGAPVALLALGMTLVIA-TGG 82

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     AI   +   L S      ++L    A  +        L ++      +A  
Sbjct: 83  IDLSVGAVMAIAGATAATLTSAGYPLGYVLAAALAAGALCGLWNGFLVAVLQIQPIVATL 142

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            L+++      LI    I                                     +++  
Sbjct: 143 MLMVAGRGIAQLITEGQIV---------------------TFEREGLAWLGSGALMYLPL 181

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
             +    +   I L  R+TA+      +  N ++  +   +  +  ++ + +      +A
Sbjct: 182 PAIIAAVMLLLIWLLTRKTALGLFIEAVGINLRSARNAGVSTRWVVMAVYVICGLCAAVA 241

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G    A       +       +  I  V++GG  SL        + +    +  GMN   
Sbjct: 242 GIIVTADIRGADANNAGLWLELDAILAVVIGG-GSLLGGRFNLLLSVVGALIIQGMNTGI 300

Query: 306 FNSLLKFDCSFNMRHTTLMVIALF 329
             S  + + +  ++   ++ + + 
Sbjct: 301 LLSGYRPEFNLVLKAIVVLAVLMV 324


>gi|301155753|emb|CBW15221.1| methyl-galactoside transporter subunit [Haemophilus parainfluenzae
           T3T1]
          Length = 336

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/297 (8%), Positives = 79/297 (26%), Gaps = 8/297 (2%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               + +   ++  Q  + ++ A G++ ++ + G   L+      + A     L      
Sbjct: 34  PTFLNVRNFSNILTQSSVRLIIALGVAGLLVTQG-TDLSAGRQVGLAAVISATLLQSMEN 92

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              +   +  +      + +             +   +    F   +     +    +  
Sbjct: 93  MNRVFPDLGEIPIPVVILTVCAVGAVIGLVNGLVIAYLNVTPFIATMGTMIIVYGFNSLY 152

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
           Y       +     S   F +       +++    +   +C     I+    +T      
Sbjct: 153 YDGVGGSPIAGFSESFSNFAQGFFRLGSFKLSYITIYAAVCAFLVWIMWN--KTRFGKNI 210

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N +A       +    +  + ++  F    G   A      + ++    E   + 
Sbjct: 211 FAIGGNPEAAKVSGVNVARNLVVIYMIAGMFYAFGGMLEAGRIGSATNNLGFMYELDAIA 270

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + V+      GG+ ++  +     I   +      +    +   +       +    
Sbjct: 271 ACVVGGVSFAGGVGTVIGVITGVIIFTVINYGLTYIGVNPYWQYIIKGSIIILAVAI 327


>gi|15889196|ref|NP_354877.1| ABC transporter, membrane spanning protein (ribose) [Agrobacterium
           tumefaciens str. C58]
 gi|15157017|gb|AAK87662.1| ABC transporter, membrane spanning protein (ribose) [Agrobacterium
           tumefaciens str. C58]
          Length = 326

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/317 (13%), Positives = 98/317 (30%), Gaps = 27/317 (8%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            L  ++  + L        S +   ++  QI +  + A G++ V+  LG + L+     A
Sbjct: 27  LLGLLMLCVFLTFASENFLSLRNGLNILDQITVLGIMAVGMTFVI-LLGGIDLSVGSVLA 85

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +         +  G+ + + I ++ + S ACG+++G+    FR         +MS     
Sbjct: 86  LSMMIMGWTANVAGMPMGMAIVLALVASAACGLVVGILVTAFRVPAFIATLAMMSV---- 141

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
                        G+                         F +    +  +L+ +    A
Sbjct: 142 -----------ARGLANMITDGQQIVGFPDWFMMLAIERHFGVLTATVLLMLVVVLVSWA 190

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
            +               +  N +        +    +  + V +   G+AG   AA  D 
Sbjct: 191 FLRFRSE----GRTVYAVGGNPEVARLAGINVPLVTICVYVVCAVLAGLAGIVLAARLDS 246

Query: 256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCS 315
           + P    F   +  I+ V++GG       + +         L   +      + L     
Sbjct: 247 VQPSS-GFGYELDTIAAVVIGG------TSLSGGAGGIGGTLIGVLIIGVLRNGLNLLNV 299

Query: 316 FNMRHTTLMVIALFLVI 332
                  ++ + + L +
Sbjct: 300 SPFLQQVIIGVVIVLAV 316


>gi|260599420|ref|YP_003211991.1| inner membrane ABC transporter permease YjfF [Cronobacter
           turicensis z3032]
 gi|260218597|emb|CBA33867.1| Inner membrane ABC transporter permease protein yjfF [Cronobacter
           turicensis z3032]
          Length = 329

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 97/334 (29%), Gaps = 24/334 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++ N    I   + V+  L          S + I ++        + A G++ V+   G 
Sbjct: 2   IKRNLPLTITLAVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVI-LSGG 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A            +G+S  +  P+  ++  A G +MG      +     I 
Sbjct: 61  IDLSVGSVIAFTGVFLAKAIGFWGMSPLVAFPLVLLMGCAFGALMGWLIDALKIPAFIIT 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L     +      +                   ++ P    +  + +  
Sbjct: 121 -----------LAGMFFLRGVSYLVSEESIPIDHPIYDTLSSLAWKIPGGGRLSAMGLLM 169

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + +         I    RT   N    I  +  +   +  +     +  + +S+    +A
Sbjct: 170 LGVV-----VIGIFLAHRTRFGNQVYAIGGSATSANLMGISTRSVTVRIYMLSTGLATLA 224

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  F+         +      +  I+ V++GG         +  +   +  L        
Sbjct: 225 GIVFSVYT-SAGYALAGVGVELDAIASVVIGG------TLLSGGVGTVLGTLFGVAIQGL 277

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
             + + FD + +   T + +  L  + +     L
Sbjct: 278 IQTYINFDGTLSSWWTKIAIGLLLFIFIALQRGL 311


>gi|218896902|ref|YP_002445313.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus G9842]
 gi|228900551|ref|ZP_04064774.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis IBL 4222]
 gi|228907677|ref|ZP_04071534.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis IBL 200]
 gi|218542433|gb|ACK94827.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus G9842]
 gi|228852169|gb|EEM96966.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis IBL 200]
 gi|228859102|gb|EEN03539.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           thuringiensis IBL 4222]
          Length = 286

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 104/305 (34%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  I  L+  
Sbjct: 8   FVNGISTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYILALVGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 68  VAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKIFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +    L     F S  +I   +  +V+L    +  +++L L++T I    R    +++
Sbjct: 116 PISAKLPLWLQGSFTSGGIILIKYRLFVILIGIIIYIALLLLLKKTKIGLMIRAGVMDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++   
Sbjct: 235 GSVQGSAIASLIVGLAGAFTAYF--------------IPDLSLAINMLMLLFFLIVKPTG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|75759904|ref|ZP_00739976.1| Branched-chain amino acid transport system permease protein livH
           [Bacillus thuringiensis serovar israelensis ATCC 35646]
 gi|74492606|gb|EAO55750.1| Branched-chain amino acid transport system permease protein livH
           [Bacillus thuringiensis serovar israelensis ATCC 35646]
          Length = 289

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 104/305 (34%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  I  L+  
Sbjct: 11  FVNGISTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYILALVGA 70

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 71  VAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKIFWGPN 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
             +    L     F S  +I   +  +V+L    +  +++L L++T I    R    +++
Sbjct: 119 PISAKLPLWLQGSFTSGGIILIKYRLFVILIGIIIYIALLLLLKKTKIGLMIRAGVMDKE 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 179 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 237

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++   
Sbjct: 238 GSVQGSAIASLIVGLAGAFTAYF--------------IPDLSLAINMLMLLFFLIVKPTG 283

Query: 339 LLRLR 343
           L+  +
Sbjct: 284 LVGEK 288


>gi|110633197|ref|YP_673405.1| inner-membrane translocator [Mesorhizobium sp. BNC1]
 gi|110284181|gb|ABG62240.1| multiple monosaccharide ABC transporter membrane protein
           [Chelativorans sp. BNC1]
          Length = 410

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/348 (12%), Positives = 87/348 (25%), Gaps = 57/348 (16%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +L  L V+      +  G       + ++ +Q    V+ A G+ ++V   G + L+
Sbjct: 36  REYGMLIALVVIMGFFQVMTDGTLMRPVNLTNLVLQNSYIVIMALGM-LLVIVAGHIDLS 94

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                        ++  +Y +S   +IP   ++    G   G     +R     +    M
Sbjct: 95  VGSVAGFVGAVAAVMLVQYDISPLGVIPACLLLGFVIGAAQGYWIAYWRIPSFIVTLAGM 154

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY---- 185
                  L      + G                +  + R                     
Sbjct: 155 LVFRGLTLWVLAGQSVGPFPRSFQLLSTGFIPDLFGVGRPNVTAILLGAITAAALVFMAM 214

Query: 186 ---------------------------------------------VLLGMCFLSASIILW 200
                                                        VL+ M  L+      
Sbjct: 215 RNRQRHTKYGMEDEPFAFFLAKNGLIAAAIVFLSYLLSTYRGFPNVLITMAVLTVIYTFL 274

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
              T +      +  N+KA               FA       +AG  FAA  +  +P  
Sbjct: 275 TNSTTVGRRIYALGGNEKAAKLSGIRTERLTFLTFANMGMLAALAGLIFAARLNTATPKA 334

Query: 261 FKFSENIIVISIVILGG------MTSLSKIAKATAILIGVVELCCGMN 302
                 + VI+ V +GG      +  ++       I+  +      + 
Sbjct: 335 -GVGFELDVIAAVFIGGASMSGGVGKITGAVVGAFIMGVMNNGMSILG 381


>gi|225548030|ref|ZP_03769315.1| hypothetical protein RUMHYD_00009 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040706|gb|EEG50952.1| hypothetical protein RUMHYD_00009 [Blautia hydrogenotrophica DSM
           10507]
          Length = 333

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/298 (12%), Positives = 93/298 (31%), Gaps = 30/298 (10%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           LNK+  ++ L  VV    +        +     S+  QI +  + + G ++V+   G L 
Sbjct: 14  LNKFTVLILLAVVVIYFAVSA--PGFMTINNGMSLLRQIAVLGILSTGFAMVM-IAGGLD 70

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM-ISGACGMIMGLPSLKFRGDYLAIAT 126
           L+      + + +  ++       +   I    + ++ +    M +           +A 
Sbjct: 71  LSISSQLFLVSCATALMIVNGVPCVAACIIGVLIAVAISAFNGMAIVLTGMPAMICTLAM 130

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
             + +    I     PI     G+ +                              +   
Sbjct: 131 QQVLQGVVYIFTGASPIYGLPEGMKII---------------------GQGYIAGIVPVP 169

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           ++ M  +       L RT +   +  +  N++A      +     + ++ V+  F+G+A 
Sbjct: 170 IIIMIVIFLIGAFILNRTYLGRYFYAVGSNEEATRLSGLSSKKIMILSYVVNGLFVGLAS 229

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCC 299
               +      P   +  E  ++ + V+      GG   +  + +   ++  +     
Sbjct: 230 IVLMSRIASGQPAAGEGYEMDVITACVVGGIAFSGGKGKMLGVVQGVLVMGVLSNGLG 287


>gi|169629710|ref|YP_001703359.1| branched chain amino acid ABC transporter [Mycobacterium abscessus
           ATCC 19977]
 gi|169241677|emb|CAM62705.1| Branched-chain amino acid ABC transporter (LivH) [Mycobacterium
           abscessus]
          Length = 356

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/331 (11%), Positives = 86/331 (25%), Gaps = 41/331 (12%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV----------------- 82
                   IY + A G ++V G L L++      + +G +                    
Sbjct: 32  IDGLAWGAIYALVAVGYTLVFGVLRLINFAHSEVFMLGMFGAYFALDVVLGFSPGGNAYN 91

Query: 83  ----ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF----- 133
               +     G+++ + + VSA  +     +   P  +     L      +   F     
Sbjct: 92  KGVSLTVLYLGVAMLVAMAVSATTALGLEAVAYRPLRRRGARPLTFLITAIGMSFVIQEF 151

Query: 134 -QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
              +L K      G         +                   F      +  V++    
Sbjct: 152 VHWVLPKIAKGYGGSNAQQPLMLVTPRPVWTFGPFDVSGHHIPFQATITNVTVVVVAAAL 211

Query: 193 LSASII-LWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
           + A +  + +  T      R +  +      +  +     ++ F +     G A   +  
Sbjct: 212 VLAFVTDIAINHTKFGRGIRAVAQDSTTATLMGVSRERIIMATFVIGGLLAGAAALLYTL 271

Query: 252 SRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
              +       F   I   S  +LGG+ +L        IL  +      +    +  ++ 
Sbjct: 272 KVPQGIIYSGGFLLGIKAFSAAVLGGIGNLRGALLGGLILGVMENYGQAVFGTQWRDVVA 331

Query: 312 FDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
           F     +              + R   +L  
Sbjct: 332 FVLLVLVL-------------MFRPTGILGE 349


>gi|218898042|ref|YP_002446453.1| putative ribose ABC transporter, permease protein [Bacillus cereus
           G9842]
 gi|218545892|gb|ACK98286.1| putative ribose ABC transporter, permease protein [Bacillus cereus
           G9842]
          Length = 317

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/295 (10%), Positives = 86/295 (29%), Gaps = 27/295 (9%)

Query: 25  LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVIL 84
           ++ +   +      +  M    +I V+ A G S V+     + ++      + A    +L
Sbjct: 22  MVGIINPSFVQFNSLSLMMKSSVILVVLAIGQSFVL-FTKNIDVSVGSIMGLSAAVCGML 80

Query: 85  GSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPIT 144
            +    ++  ++    + +    +     +       +    ++       ++       
Sbjct: 81  LTNGYSAVLSILAAIMLGAIIGFINGIGVAKFRVPAIIMTLGMLGIVRGAMLIFTGGKWI 140

Query: 145 NGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRT 204
                                      F     I  + +  ++ G+  +   +  +LR+ 
Sbjct: 141 ---------------------EDTPNNFKKLSSIVILGLPIIVWGVLIILLLLYFFLRKV 179

Query: 205 AISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFS 264
                +  + DN+     +   +   K++AF +S     +AG  F  +   +        
Sbjct: 180 PYGRYFYAVGDNEDGARLIGIPVNKVKINAFIISGISAAIAGCIFVMNIGFVPNQTGTGI 239

Query: 265 ENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
           E  ++ + V+      GG  S+   A     L  +      +    F +      
Sbjct: 240 ELQVIAAAVLGGIHLKGGTGSIFGAALGALFLEAISSSLVFLKIPAFWNNAISGF 294


>gi|196032205|ref|ZP_03099619.1| putative ribose ABC transporter, permease protein [Bacillus cereus
           W]
 gi|195994956|gb|EDX58910.1| putative ribose ABC transporter, permease protein [Bacillus cereus
           W]
          Length = 317

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 89/297 (29%), Gaps = 27/297 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L ++Y  ++ +   +      +  M    +I V+ A G S V+     + ++   + 
Sbjct: 12  IITLLLIYIAIVGMINPSFIQFNSLSLMVKSSVILVVLAIGQSFVL-FTKNIDVSVGSSM 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A    +L +             ++ +      +             +  +IM+    
Sbjct: 71  GLSAAVCGMLLTNEYS------ASLSIFAAITLGAIIGFVNGIGVAKFRVPAIIMTLGML 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+     I  G   I                     F     I  + +   +  +  + 
Sbjct: 125 GIIRGAMLIFTGGKWIEDIP---------------NDFKQLSSIVILGLPITVWFVLIIL 169

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +  +LR+      +  + DN+     +   +   K+ AF +S     +AG  F  +  
Sbjct: 170 LLLYFFLRKVPFGRYFYAVGDNEDGARLIGIPVNKVKICAFIISGISAALAGCIFVMNIG 229

Query: 255 RISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
            I        E  ++ + V+      GG  SL   A     L  +      +    F
Sbjct: 230 FIPNQTGTGLELQVIAAAVLGGIHLKGGTGSLFGAALGAFFLETISSSLVFLKIPAF 286


>gi|167772450|ref|ZP_02444503.1| hypothetical protein ANACOL_03827 [Anaerotruncus colihominis DSM
           17241]
 gi|167665553|gb|EDS09683.1| hypothetical protein ANACOL_03827 [Anaerotruncus colihominis DSM
           17241]
          Length = 335

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 101/297 (34%), Gaps = 26/297 (8%)

Query: 20  VVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAY 79
           ++  L+L +   A      I ++  Q  ++ + A G++ V+ S G + ++  +       
Sbjct: 25  LLLFLILAVSQPAFLQASNIMNILCQCSLFGIMAIGMTFVI-STGGIDISVGMNALFTMA 83

Query: 80  SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIK 139
               L S   L +W +  ++  + G  G+                    ++    ++L  
Sbjct: 84  LMYRLNSFGVLPVWAVFIIALAVGGLIGL--------------------LNGFMASVLNF 123

Query: 140 WKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIIL 199
              I        +    Y L    +  ++              +    + M  ++A+ IL
Sbjct: 124 PDMIATLATMSILRGAAYLLLDNAQKFVQTPLRVIGNSRLFGLIPTPTILMLAITAAGIL 183

Query: 200 WLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPD 259
            LR T        +  N+ +       +   ++ A+A+  A   + G  +A     I+P+
Sbjct: 184 VLRYTRFGRYVLAVGGNRNSAVFSGLNVTRIRIGAYAICGACAALGGIVYAGRIGSIAPN 243

Query: 260 MFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLK 311
                E  ++ ++V     + GG +S+   A     L  +      +N   +  +  
Sbjct: 244 SCMGYEFTVITAVVLGGTKMSGGKSSVIGSALGCIFLYLIENAMTMLNISSYYQVFA 300


>gi|218904090|ref|YP_002451924.1| putative ribose ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|218539740|gb|ACK92138.1| putative ribose ABC transporter, permease protein [Bacillus cereus
           AH820]
          Length = 317

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 89/297 (29%), Gaps = 27/297 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L ++Y  ++ +   +      +  M    +I V+ A G S V+     + ++   + 
Sbjct: 12  IITLLLIYIAIVGMINPSFIQFNSLSLMVKSSVILVVLAIGQSFVL-FTKNIDVSVGSSM 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A    +L +             ++ +      +             +  +IM+    
Sbjct: 71  GLSAAVCGMLLTNEYS------ASLSIFAAITLGAIIGFVNGMGVAKFRVPAIIMTLGML 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+     I  G   I                     F     I  + +   +  +  + 
Sbjct: 125 GIIRGAMLIFTGGKWIEDIP---------------NDFKQLSSIVILGLPITVWFVLIIL 169

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +  +LR+      +  + DN+     +   +   K+ AF +S     +AG  F  +  
Sbjct: 170 LLLYFFLRKVPFGRYFYAVGDNEDGARLIGIPVNKVKICAFIISGISAALAGCIFVMNIG 229

Query: 255 RISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
            I        E  ++ + V+      GG  SL   A     L  +      +    F
Sbjct: 230 FIPNQTGTGLELQVIAAAVLGGIHLKGGTGSLFGAALGALFLETISSSLVFLKIPAF 286


>gi|328542697|ref|YP_004302806.1| branched-chain amino acid transporter permease livH [polymorphum
           gilvum SL003B-26A1]
 gi|326412443|gb|ADZ69506.1| Branched-chain amino acid transport system permease protein livH
           [Polymorphum gilvum SL003B-26A1]
          Length = 299

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/298 (11%), Positives = 83/298 (27%), Gaps = 18/298 (6%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           L+Y + A    ++  +  +++L        GA            + + L     +     
Sbjct: 16  LVYGLVAISFVVIYRASRIINLAQGEVLVFGALFLWTFTLGAQAAGYPLPLPVGIALTVL 75

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
           G +     L+       I     +    ++ +        +       R         +L
Sbjct: 76  GCVGFGLVLERFVFRPLIGQSAFAIFMASVALLILLRGVAQFVWSAETRPAPTILPEGAL 135

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                  ++ ++        L+       ++ L+  R+        + ++     SL  +
Sbjct: 136 QVGPFLINTGLLIGGIFTLALM------VALQLFFTRSRHGLRLAAVAEDHSTALSLGIS 189

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           +  A   A+ + +     A     + R      +         + + +LGG+ S+     
Sbjct: 190 VRQAIAVAWILGAVVATFAAMVLLSGRII---SLEVAHIGFKALPVALLGGLESIRGAPL 246

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRT 344
           A  ++     L         N               L  + +  V+L+R   L   + 
Sbjct: 247 AGVMIGVGEALAIAYLDPLTNGAASG---------ILPYVVMIAVLLVRPQGLFGWKK 295


>gi|46198528|ref|YP_004195.1| branched-chain amino acid transport system permease protein livH
           [Thermus thermophilus HB27]
 gi|55980558|ref|YP_143855.1| branched-chain amino acid ABC transporter permease [Thermus
           thermophilus HB8]
 gi|46196150|gb|AAS80568.1| branched-chain amino acid transport system permease protein livH
           [Thermus thermophilus HB27]
 gi|55771971|dbj|BAD70412.1| branched-chain amino acid ABC transporter permease protein [Thermus
           thermophilus HB8]
          Length = 291

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 92/308 (29%), Gaps = 26/308 (8%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+        +Y + A G  +V  +  +++        +GAY          L + LL 
Sbjct: 6   PYLIGGLANGALYSLLALGFVLVYRATSVVNFAIGEFLLVGAYLTYTFALLLPLPLALLA 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
            +         +  G        +   +A ++ +      L     +  G          
Sbjct: 66  ALPLAFLFGVLVERGFVRPLLGRN--VVAVIMATIGLAAALDGGVQLLWGPD-------- 115

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +   +    F +  V       + LL    L   ++  LR++      R I + 
Sbjct: 116 ---LKYLPGSLPDLGFEAGGVYVSSRAVWNLLLALPLGLGLLWLLRKSRYGVLVRAISER 172

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           + A  +L           + VS+    +AGA  AA+       +F     + V  + ILG
Sbjct: 173 EVAALALGIPTARILAGVWGVSALLATLAGALLAAASGVGHNLVF---FGLKVFPVAILG 229

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           G+ ++     A  +L  +  L       Y     +      +    L+          R 
Sbjct: 230 GLDAVGGALAAGFLLGVLEALSQRYLEAYLPGFTEALPFVVVLLVLLV----------RP 279

Query: 337 HSLLRLRT 344
           + L   R 
Sbjct: 280 YGLFGERQ 287


>gi|146297501|ref|YP_001181272.1| monosaccharide-transporting ATPase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145411077|gb|ABP68081.1| xylose ABC transporter membrane protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 373

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/359 (10%), Positives = 93/359 (25%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  + +++ +   L  G   + + +  +  Q+ I  + A G+  V+   G + L+
Sbjct: 8   RTYTLIIAILLIWAIFTILTDGNFLTPRNLSMLARQMAITALVAIGMVFVI-VAGHIDLS 66

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                        +L    G S    +    ++    G+  G            +    M
Sbjct: 67  VGSVVGFAGAIAGVLQVWNGWSTPATVIAVLIVGILIGIWQGYWVAYRGVPAFIVTLAGM 126

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI-------- 181
                 +L+  + IT                    SL+        +++  I        
Sbjct: 127 LIFRGGVLLASRGITISPFKESFRFIGQGYLNKPLSLLFGAILIVGYLLLTINQRNKRKK 186

Query: 182 ---------------------------------FMYYVLLGMCFLSASIILWLRRTAISN 208
                                             +   +L +   +  +    + T    
Sbjct: 187 YNLEVLPIGLEVAKAVAIIALIAVFTGVMISYEGISIPVLILVIFTILLTFVSQNTTFGK 246

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N++A       I    +  F +      +AG    +  D  +       E   
Sbjct: 247 YVYAIGGNREAARLSGIDIKKVTMKIFILMGFLSALAGIVLTSRLDAATSGAGTNMELDA 306

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + ++     LGG  ++        I+  +      +N  Y   L+            
Sbjct: 307 IAAAILGGTSTLGGEGTVPGAIIGALIMASIDNGMSLLNLEYSYQLIVKGLVLVFAVWL 365


>gi|237729158|ref|ZP_04559639.1| inner membrane ABC transporter permease YjfF [Citrobacter sp. 30_2]
 gi|226908887|gb|EEH94805.1| inner membrane ABC transporter permease YjfF [Citrobacter sp. 30_2]
          Length = 333

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 98/334 (29%), Gaps = 24/334 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++ N    I   + V+  L       A  S + I ++        + A G++ V+   G 
Sbjct: 2   IKRNLPLMITLGVFVLGYLYCLTQFPAFASTRVICNILTDNAFLGIIAVGMTFVI-LSGG 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A            +G+S  L  P+  ++  A G  MGL     +     I 
Sbjct: 61  IDLSVGSVIAFTGVFLAKAIGYWGISPLLAFPLVLLMGCAFGAFMGLLIDALKIPAFIIT 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L     +      +                   ++ P    +  + +  
Sbjct: 121 -----------LAGMFFLRGVSYLVSEESIPINHPVYDTLSSLAWKIPGGGRLSAMGLLM 169

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + +         I    RT   N    I  N  +   +  +     +  + +S+    +A
Sbjct: 170 LAVV-----VIGIFLAHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLA 224

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  F+         +      +  I+ V++GG         +  +   +  L        
Sbjct: 225 GIVFSIYTQ-AGYALAGVGVELDAIASVVIGG------TLLSGGVGTVLGTLFGVAIQGL 277

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
             + + FD + +   T + +  L  + +     L
Sbjct: 278 IQTYINFDGTLSSWWTKIAIGILLFIFIALQRGL 311


>gi|225570178|ref|ZP_03779203.1| hypothetical protein CLOHYLEM_06274 [Clostridium hylemonae DSM
           15053]
 gi|225160973|gb|EEG73592.1| hypothetical protein CLOHYLEM_06274 [Clostridium hylemonae DSM
           15053]
          Length = 305

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/301 (9%), Positives = 77/301 (25%), Gaps = 28/301 (9%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
                  ++ + + ++     +Y + A G++ V+   G + L+     A+          
Sbjct: 19  AFISPTFRTVQNLINLLGHNAVYGLLAVGMAFVI-ITGGVDLSVGSVCALSGVMSAYAFI 77

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            YG  + L   ++  I       +    +        +  + ++     I+     I   
Sbjct: 78  DYGFIVGLAAGLAVGIVCGFINGILQTVIGMNHFVATLGMMTIARGAVYIITSGFNIYGI 137

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                                    +    + Y   +    +          L L+ T  
Sbjct: 138 P----------------------EAYGVVGMGYLGPVPVAGIIWLACVVIAFLVLKYTGF 175

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                 I  N  A +         K   + +   F G+AG   +      + +     E 
Sbjct: 176 GQYVYAIGGNMNAAWLSGINTKLVKTVVYVICGFFAGLAGVVLSCRTLLAAANAADTYEL 235

Query: 267 IIVISIVILG-----GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
             + + ++ G     G  ++        IL  ++ +    +   +               
Sbjct: 236 TAISACIVGGLSLDGGRGNVWGSVVGVLILGLILNIMQLTSVSSYWQDAVKGIIIIGAVA 295

Query: 322 T 322
            
Sbjct: 296 V 296


>gi|160937827|ref|ZP_02085186.1| hypothetical protein CLOBOL_02719 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439266|gb|EDP17019.1| hypothetical protein CLOBOL_02719 [Clostridium bolteae ATCC
           BAA-613]
          Length = 316

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/314 (11%), Positives = 88/314 (28%), Gaps = 27/314 (8%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +  I+ +      + + +F     +     ++       +M A G ++++   G + L+ 
Sbjct: 15  HTVIIYVFLAALMVFVSIFNKDFFTLGNFKNLLRSSFPLLMAALGQTLII-LTGGIDLSL 73

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               A+     V+  +      ++    +A   G     +    +        I T+  +
Sbjct: 74  GGIVALCNVVCVMSMNPDSAWGFVPALGAAAAVGLACGAVNGVLVTKGRLAPIIVTIATT 133

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            +F  + +   P   G                        +  + F+          L  
Sbjct: 134 AVFDGMALLLMPNPGGS---------------------VHKAFAKFLTRGYSGAVPFLLF 172

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +   +      T    A R I  ++ A +S    +   K  A+ ++     +AG F +
Sbjct: 173 ILILCLVRSLANSTPYGKALRAIGGSENAAYSTGIRVGKIKFCAYCLAGLLCAVAGIFLS 232

Query: 251 ASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           A  +     + K      + + V+      G +           I+  +  +        
Sbjct: 233 AQMNSADATIGKNYAMNAITATVVGGTAMTGAVGDPLGTIAGVFIISIINNMLNLFGVSS 292

Query: 306 FNSLLKFDCSFNMR 319
           F   +         
Sbjct: 293 FYQFICQGLILIAA 306


>gi|320662834|gb|EFX30166.1| putative transport system permease protein [Escherichia coli O55:H7
           str. USDA 5905]
          Length = 332

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/317 (11%), Positives = 89/317 (28%), Gaps = 27/317 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++  +  L+  L      S     ++        + AW +++++   G + ++     
Sbjct: 29  LLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLII-ISGEIDVSVRPMV 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  +     L          +  +  ++ GA    +             +ATL +    +
Sbjct: 88  AFVSVCLAFLLQ--FEVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALR 145

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +                        +   I             + +    L M  L 
Sbjct: 146 GMGLFMTN-------------------ALPVPIDENEVLDWLGGQFLGVPVSALIMMVLF 186

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A  +   R+TA   +   +  N  A       +   ++  F +S     + G   AA   
Sbjct: 187 ALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLG 246

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             +       E  ++ ++V+      GG  SL        ++  +      +    F   
Sbjct: 247 SGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQ 306

Query: 310 LKFDCSFNMRHTTLMVI 326
           +       +     +++
Sbjct: 307 VVRGVIIVVAVLANILL 323


>gi|227819703|ref|YP_002823674.1| ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227338702|gb|ACP22921.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 293

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 83/302 (27%), Gaps = 24/302 (7%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
                IY   A  L ++  +  +++          AY        +G+ + +   V   +
Sbjct: 12  LASGAIYASLALALVLIFRATRIVNFGQGEMATFSAY-CAWQLCEWGVPMMVSFLVVTPL 70

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +   G+++    ++        A ++++     +         G                
Sbjct: 71  AFLLGIVVFRFVIRPVSRAPVEAVVVVTLGLFVVFQALCLWLWGSD-----------QRA 119

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
             SL     +    +         L  +  L+ +I    R T +  A R    + +    
Sbjct: 120 FPSLFPNLGWDVLGIRVTASAVGTLAVLLGLAFAIGAVFRFTRLGLAMRASAYDGEKSLL 179

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +    +  +  ++    +A              M         ++   LGG  S  
Sbjct: 180 VGIPVERMLMLGWGFAAMIGFIAALLVGPRLFLSPTMMMPILLY--ALASATLGGWDSPL 237

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                  I+  V  +      +    L             + +I   +V+L+R   L   
Sbjct: 238 GAMVGGLIVGVVESVGAAFLPFIGADL----------RVVIPIIVALVVLLVRPIGLFGT 287

Query: 343 RT 344
           RT
Sbjct: 288 RT 289


>gi|331092125|ref|ZP_08340956.1| hypothetical protein HMPREF9477_01599 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330402326|gb|EGG81897.1| hypothetical protein HMPREF9477_01599 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 356

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/294 (11%), Positives = 85/294 (28%), Gaps = 7/294 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  L +V  +   +      S   I ++       +  A G++  +   G   L+     
Sbjct: 35  LYFLIIVAVIYTAVQNPKFVSTSSIVNIISLSAANIPIAVGIAGCIVLTG-TDLSAGRVV 93

Query: 75  AIGAYSYV-ILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            + A     +L +    +          I     +++ + ++    +   +A   +    
Sbjct: 94  GLTACISASLLQAVDYPTKIFPDLPVLPIPLVILIVVLVGAIVGVVNGFFVAHFQLHPFI 153

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +  +          I +        + +    + F   S   I  + +   +   C +
Sbjct: 154 VTLATQLIVYGVLLMYIMLNGNNGQPLSGLDQSFKDFVTGSVLKIDGVPIPNYVWYACII 213

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              +     +T+       +  NQ+A       +    +    ++ A   + G   AA  
Sbjct: 214 VILMWFIWNKTSFGKNMFAVGSNQEAANVSGVNVAKTIILVHTLAGAMYAVTGFIEAARI 273

Query: 254 DRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
                +     E   + + VI     +GG   +  +     IL  +      ++
Sbjct: 274 GSNQANTGLNYECDAIAACVIGGVSFVGGTGKIRGVVMGVFILRIIFVALNFLS 327


>gi|293606118|ref|ZP_06688483.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292815573|gb|EFF74689.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 292

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 93/305 (30%), Gaps = 27/305 (8%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
            +      +Y + A    IV  +  ++++       +GAY +    +     IWL I  +
Sbjct: 11  LAGLGSGGLYALAALAFVIVYKATRVVNIAIGEFLMLGAYVFYAFATEMQWPIWLAIVGA 70

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
            ++SGA G ++   +++       I+  +++    +IL+    +        + + +   
Sbjct: 71  VVVSGALGALVERLTIRPMLGEAPISVFMVTVGLASILVGVVELIWTADQRRLPEIMPRS 130

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
              V       +    F +  +    VL+   +    + L    +    A+    +  + 
Sbjct: 131 PVMVGEAFVAPKVFYGFWVAVVLALLVLVVFRYWRGGVALRATASDQGAAYAMGINVPRV 190

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
           F             +  +  A  G++ +        +   +    +              
Sbjct: 191 FSLAWVAAGALAAVSGVIVGAIGGISSSMGVFGLSVLVVVIVGGLD-------------- 236

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
           S++        +  +           F  L  F             I L +V+++R + L
Sbjct: 237 SVAGALVGGVFIGLLEAWAGAYLGGEFKLLATF-------------IVLVVVLMVRPYGL 283

Query: 340 LRLRT 344
              R 
Sbjct: 284 FGTRE 288


>gi|288921963|ref|ZP_06416173.1| inner-membrane translocator [Frankia sp. EUN1f]
 gi|288346673|gb|EFC80992.1| inner-membrane translocator [Frankia sp. EUN1f]
          Length = 292

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 90/306 (29%), Gaps = 24/306 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +        IY   A  L +V  + G+++        + AY      +  G+ + + +  
Sbjct: 7   VVDGLSAGSIYAALALALVLVHRATGVVNFAQGEMGVLMAYV-AWSLTSAGVPVLVAVLA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +  +S   G+      ++       +  ++++     +L        G           +
Sbjct: 66  AMALSFPLGVATERFLIRRFHGQDGLVIVVVTVGLLILLNGIVGAIWG-----------Y 114

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +     SL          V   +     L+ +  + A + +   RT    + R + DN++
Sbjct: 115 VSKPFPSLFPNEVIRLGGVAVTVEQIGNLVVLLAVVAGLQIIFLRTRFGLSLRAVADNRE 174

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           +       +    ++ + +++A   +A    A             +  +  ++  +LGG+
Sbjct: 175 SSALSGLAVNRLLMAGWGMAAALGTLAACLIAPKIFL--DPSMMNAVLVYSLAAAVLGGL 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S      A  ++     +           L        M    L           R   
Sbjct: 233 DSPVGAVVAALVIGVAENIAGAYIDIIGTDLKIAVPLLLMVVVLLG----------RPQG 282

Query: 339 LLRLRT 344
           +   R 
Sbjct: 283 IFGRRE 288


>gi|266619265|ref|ZP_06112200.1| ribose ABC transporter, permease protein [Clostridium hathewayi DSM
           13479]
 gi|288869180|gb|EFD01479.1| ribose ABC transporter, permease protein [Clostridium hathewayi DSM
           13479]
          Length = 338

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/329 (10%), Positives = 87/329 (26%), Gaps = 32/329 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           + ++L +L  +          +  S     ++  Q+  Y +   G++I +   G + L+ 
Sbjct: 13  FTRMLSILVFLLVFAGITRGSSFISVANFQNIAKQLTEYGLMTLGVAIAM-ISGGIDLST 71

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
           V    + A     +  +   +  +   + A  +     +            L I  ++ +
Sbjct: 72  VYVANLSAICAGTIMQQTAPNGEIAGILLACAAALVIGLACGFMNGLLISVLHIPAMLAT 131

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                +      +               L               S  +    +   +L  
Sbjct: 132 LGSYELFYGIGIV---------------LSKGRAVSSTVGFGNLSGALIFGIIPVPILIF 176

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              +  +   +  T        I  + KA            ++ + +S      AG    
Sbjct: 177 LLAAVVLTFIMGHTTFGKQVHMIGISNKASMFTGINNTKVIITVYVISGFLSSAAGLISL 236

Query: 251 ASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           +    +  D       + ++  V+      GG   +  +A A  ++  +      +    
Sbjct: 237 SRVSSVKADFGSSYVMLAILITVLGGCDPNGGFGEIPGVATAVLVMQVIAAYLNTL---- 292

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILM 334
                      N     L  I L  V+  
Sbjct: 293 -------PGVSNYYRQLLYGILLLAVMTF 314


>gi|260494627|ref|ZP_05814757.1| galactoside transport system permease mglC [Fusobacterium sp.
           3_1_33]
 gi|260197789|gb|EEW95306.1| galactoside transport system permease mglC [Fusobacterium sp.
           3_1_33]
          Length = 311

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/285 (11%), Positives = 83/285 (29%), Gaps = 8/285 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+     + + +      S +   ++  Q  +  + A G++ ++ + G   L+     
Sbjct: 21  LYLVLFCMLVAIIIKEPTFLSIRNFKNILTQSSVRTIIALGVAGLIVTQG-TDLSAGRQV 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     L             +         +I+ +  +        +   +    F 
Sbjct: 80  GLSAVISGTLLQSATNVNKAFPTLGEFSIFTTILIVVVVGVVIASINGIVVATLNVHPFI 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +     +    +  Y       +   V    +F +       Y I    +   +    
Sbjct: 140 ATMGTMTIVYGINSLYYDKAGAAPISGFVERYSKFAQGYIQIGSYTIPYLIIYAAIAT-- 197

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +     +T        +  N +A       ++   +  +A+S A+    G   A    
Sbjct: 198 LIMWTLWNKTKFGKNVFAVGGNPEAAKVSGVNVVLTLMGIYALSGAYYAFGGFLEAGRIG 257

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGV 294
             + ++    E   + + VI      GG+  +S +     IL  +
Sbjct: 258 SATNNLGFMYEMDAIAACVIGGVSFYGGVGRISGVITGVIILTII 302


>gi|254389474|ref|ZP_05004701.1| ABC transporter sugar permease [Streptomyces clavuligerus ATCC
           27064]
 gi|294815851|ref|ZP_06774494.1| ABC transporter sugar permease [Streptomyces clavuligerus ATCC
           27064]
 gi|326444192|ref|ZP_08218926.1| ABC transporter sugar permease [Streptomyces clavuligerus ATCC
           27064]
 gi|197703188|gb|EDY49000.1| ABC transporter sugar permease [Streptomyces clavuligerus ATCC
           27064]
 gi|294328450|gb|EFG10093.1| ABC transporter sugar permease [Streptomyces clavuligerus ATCC
           27064]
          Length = 354

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 92/283 (32%), Gaps = 13/283 (4%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            + A    L   L   +        ++        + A  +++++   G   L+  +   
Sbjct: 38  VVGAAAVFLFFALVADSFLQASSFSTVLYASSTIGIMAVPVALLM-IGGEFDLSAGVLVT 96

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
             A    ++  +   ++W+ + VS +++ A G+  G+           I TL    +   
Sbjct: 97  SSALVSSMVSYQMTANVWVGVLVSLLVTLAIGVFNGVLL-TRTELPSFIITLGTFLMLTG 155

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
           + + +  + +G         +    +          F S F + E+ +   +L    L A
Sbjct: 156 LNLGFTKLISGTVSTKSTADMEGFSSAKA------LFASEFTLGEVTVKVTILWWIGLVA 209

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
                L RT   N    +     A  ++   +   K+  +   +    ++G     S D 
Sbjct: 210 LATWILLRTRFGNWIYAVGGGADAARAVGVPVARTKILLYTGVAFAAWISGQHLLFSFDV 269

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIG 293
           +       +E I +I+ V     I GG  S    A    I   
Sbjct: 270 VQSGEGVGNELIYIIAAVIGGCLITGGYGSAIGSAVGAFIFGM 312


>gi|307316780|ref|ZP_07596222.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
 gi|306897402|gb|EFN28146.1| inner-membrane translocator [Sinorhizobium meliloti AK83]
          Length = 348

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/326 (12%), Positives = 90/326 (27%), Gaps = 8/326 (2%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R         +L     L   L  G   S +    +   + I  + A G++  +  +G 
Sbjct: 20  IRETAIKYGFLMLLAGMVLYFSLVTGGFASPQSAVFILQSVSITGILALGVTATL-VVGG 78

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
             L+          +   +    G        V   +    G+I G   +  R   L   
Sbjct: 79  FDLSIGSVATTAMMASSYVMVVMGGDALTAALVCLAVGALVGLINGFIIVYMRVPDLLAT 138

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
             +M  +     I  +  +                 T              ++    +  
Sbjct: 139 LGMMFLLLGLQRIPTEGRSIAAG--MTLPDGSVATGTFSPAFLALGRHRFDLVLPNLVPV 196

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            ++ +  L+ +I  +L  T        +  N++A       +   K+SA+ +S  F  + 
Sbjct: 197 SVVVLVVLAIAIWFFLEYTRFGRIMYAVGSNERAAALAGAPVNAYKISAYVISGVFASIG 256

Query: 246 GAFFAAS-----RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCG 300
           G   AA          +  +       ++   V+     +    A     +  +++    
Sbjct: 257 GILLAARLGRGDIASGNNLLLDAVAAALIGFAVLGAAKPNAFGTAVGALFVGILLQGLTM 316

Query: 301 MNFYYFNSLLKFDCSFNMRHTTLMVI 326
           MN  Y+           +       +
Sbjct: 317 MNAPYYTQDFIKGAVLVVALIFTFAL 342


>gi|260222340|emb|CBA31806.1| hypothetical protein Csp_D28960 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 343

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 81/242 (33%), Gaps = 10/242 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +    Y + A GLS++ G + +++L       +GA+  V+     G S WL +  
Sbjct: 37  LIQGTLLGGYYAVLAAGLSLMFGVMRIINLAHGDLAMLGAFV-VLWLVGLGWSPWLAVLA 95

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +    G  GM++    L        +  L+++     ++        G     +AD L  
Sbjct: 96  TVPAMGVVGMLLQHWVLARTLRSGVLLPLLVTMGLGALIQNALYGVFGSEARSLADAL-- 153

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L          +         L+    + A++   L  T +  + R    + +
Sbjct: 154 -----GELSWASWTLPGDINVGQLSVLTLVLGVAVLAALQALLSWTRLGRSIRAASSDPE 208

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A             +A A+S     +AGA  A                I+    V++GG+
Sbjct: 209 AAALCGVDAGRVHRAAAAISVGLAALAGAMLATRATI--EPYGGPLLLIMAFEAVVIGGI 266

Query: 279 TS 280
            S
Sbjct: 267 GS 268


>gi|256831529|ref|YP_003160256.1| Monosaccharide-transporting ATPase [Jonesia denitrificans DSM
           20603]
 gi|256685060|gb|ACV07953.1| Monosaccharide-transporting ATPase [Jonesia denitrificans DSM
           20603]
          Length = 357

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/330 (12%), Positives = 94/330 (28%), Gaps = 35/330 (10%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQ-----------KYIDSMGIQILIYVMFAWGLSI 58
           K   +  +LA+V  L + L    T                +  +       +M A G+ +
Sbjct: 17  KKQYVWGVLAIVLLLAINLAKDPTYLSITVSESNGHLVGNVIDILRAAAPIMMIAIGMCL 76

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           VV + G + L+      +     + L +    ++        +       +         
Sbjct: 77  VVATSG-IDLSVGSLMVVAGAVSMELLNGADNTVGAAAQALVLALAIATALG-------- 127

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
                   L+     Q  +     +  G+    V        +T  +             
Sbjct: 128 ---FLNGFLVSVVGLQPFISTLVMMLAGRGLAKVITGGQNTSSTNDTFRWL------ANG 178

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
           Y + +  V +    ++  +   +RR+A+      I  + +A            L  +A S
Sbjct: 179 YVLGVPVVFILAVLVAVVVAFVVRRSALGLMIEAIGMDPQAARLAGINRRGLLLMVYATS 238

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT------SLSKIAKATAILI 292
               G+AG F  AS   +      +   +  I  V++GG +       LS     + ++ 
Sbjct: 239 GVLAGIAGVFATASVMTVDVSRTGYQMELDAILAVVIGGTSLAGGKFHLSGAFVGSLLIA 298

Query: 293 GVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
            + +    +      +         +    
Sbjct: 299 TLDKTVVFLGVSSSATPAFKAIVIVVLCLL 328


>gi|227892729|ref|ZP_04010534.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus ultunensis DSM 16047]
 gi|227865506|gb|EEJ72927.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus ultunensis DSM 16047]
          Length = 318

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 74/270 (27%), Gaps = 2/270 (0%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G++++       +GA++ +I    +  +     P    + GA   ++      F    L
Sbjct: 34  SGIVNIGLEGIMTVGAFTSIIFNLAFAKTFGSATPWLGALVGAIFGLIFSILHAFATINL 93

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
               +I   +   +                             +    + P    I+   
Sbjct: 94  HADHIISGTVLNLLAPPLGVFLIKAIYEKGQTPNITANFGYADIPVLAQIPVIGKIFFTN 153

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
                     L+  +   L +T +    R+  +N +A  +L   +   +      S    
Sbjct: 154 TSAPAWLAIILTVILWFVLYKTKLGLRLRSTGENPQAADTLGINVYKMRYIGVLTSGLMA 213

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G+ GA FA S            +  + ++ VI  G  +      ++            + 
Sbjct: 214 GLGGAVFAQSISGNFSISTIVGQGFMALAAVIF-GKWNPVGAMLSSLFFGFAQS-LSIIG 271

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
                          +    + ++ L L +
Sbjct: 272 NQLPGIAKIPTVYMQIAPYVITILVLVLFL 301


>gi|182436445|ref|YP_001824164.1| putative sugar ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326777069|ref|ZP_08236334.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|178464961|dbj|BAG19481.1| putative sugar ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326657402|gb|EGE42248.1| ABC-type transporter, integral membrane subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 372

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 85/288 (29%), Gaps = 3/288 (1%)

Query: 42  MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAM 101
           +  Q   Y + A  +++    + L ++     Y + A    ++G+   L   L I +  +
Sbjct: 58  IVNQAGTYYLAALAVAVGF-RMNLFNIGVDGQYRLAAMMAALVGASVNLPGPLHIALIVI 116

Query: 102 ISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGT 161
           ++   G      +   +     ++ ++ + +  +I                        T
Sbjct: 117 VAMLVGAFWSGIAGFLKTTR-GVSEVVSTIMLNSIATALVAWMILPKNFGEQPAGSNNLT 175

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
           T       +            +Y                L RT      R    ++ A  
Sbjct: 176 TGEIPESGWFPGLPMGDQAGEIYGFTFVAAGCGLLYWFVLNRTRFGFDLRATGASESAAQ 235

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSL 281
           +         L++  +S A  G+AG              F        I+I +L G  + 
Sbjct: 236 ASGVDAKKMILTSMLISGAVAGLAGMPTLLGDTHTYSLDFPTGIGFTGITIALL-GRNNP 294

Query: 282 SKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALF 329
             IA +  ++  + +    ++ Y F   +       +  + ++   L 
Sbjct: 295 LGIAFSALLIAFLDKSSASLDQYGFEKEIATIMQGLIVISVVVSYELV 342


>gi|167562798|ref|ZP_02355714.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia oklahomensis EO147]
          Length = 306

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 79/278 (28%), Gaps = 27/278 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  VV  + +     +  S   ++++  Q+ I  +   G++ V+   G + L+     A
Sbjct: 11  LVGLVVVCIAMVFASDSFLSAANLENVLRQVSINAIIGVGMTCVI-LTGGIDLSVGSVMA 69

Query: 76  IGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQN 135
           +                        +++G  G       +       A   L ++     
Sbjct: 70  LSGTLTA----------------GLLVAGINGAAALAAGVGVGLALGAANGLFVAFAGMP 113

Query: 136 ILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSA 195
            +I          G  +     +    +   IRFF       +    +  +++      A
Sbjct: 114 PIIVTLATMGIARGFALIYTGGYPIDGLPDWIRFFGSGKVLGVQMPVLTMLVV-----YA 168

Query: 196 SIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR 255
              L L R         I  N+ A +     +   KL  +  +     +A          
Sbjct: 169 LAWLLLERMPFGRYVYAIGGNEHATWLSGVRVARVKLVVYTFAGLTSALAALVLTGRLMS 228

Query: 256 ISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKAT 288
             P+     E   + ++V     I GG  S+       
Sbjct: 229 GQPNAGVGFELDAIAAVVMGGTSIAGGRGSIVGTLIGA 266


>gi|49476894|ref|YP_035004.1| ribose ABC transporter permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49328450|gb|AAT59096.1| ribose ABC transporter, permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 329

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/320 (10%), Positives = 88/320 (27%), Gaps = 18/320 (5%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           Y      + +   +   +   +  +   I  +   I I  + A G++  +   G   L+ 
Sbjct: 18  YQFSTIAIIIGVTIFFSIVNDSFLTYNNISDILRSISIVTLLAIGVTFTLIVDG-FDLSV 76

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
               ++   +       Y   + + + V  +     G++  L  ++ +   L        
Sbjct: 77  GSTASLATIAAASCLILYRQELLVTLLVPILCGLLVGLLNALLVIRIKLPDLLAT----- 131

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                  +    I NG    +      + G +         F        + +   ++ M
Sbjct: 132 -------LSIMYIVNGLHLTFSKGSSIYEGMSEAKGHFIPSFLFIGQGSVLGIPVPVIIM 184

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             +     L+L +T     +     N++A           ++ A+ +S     + G    
Sbjct: 185 LIVVLIAHLFLEKTTYGRFFYMTGGNREAARLAGIPTDRYRVYAYMISGLLASIGGIILC 244

Query: 251 ASRDRISPDMFKFSENIIVISI----VILGGMT-SLSKIAKATAILIGVVELCCGMNFYY 305
           +                 V +      + G    ++      + ++  ++     MN  Y
Sbjct: 245 SRVGTGQVSAGAPLLMDAVAAAYIGYAMFGAKKPNIVGTFLGSVLIGIILNGLTMMNVPY 304

Query: 306 FNSLLKFDCSFNMRHTTLMV 325
           +   +              +
Sbjct: 305 YAQDIIKGSILITALAFSFI 324


>gi|148254034|ref|YP_001238619.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146406207|gb|ABQ34713.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 292

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 84/284 (29%), Gaps = 27/284 (9%)

Query: 59  VVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFR 118
           V G   +++      YA+G Y  + +          L  V  +++G    +      + R
Sbjct: 32  VFGLGRVVNFAHGAFYALGGYVLISVMRVGAGFWLALAVVPVVLTGIGLALEAGLIRRLR 91

Query: 119 GDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVI 178
                   L    +   ++   + +      I      +     V S             
Sbjct: 92  KRPEVDTLLATFGLSAMLVGGIEYLWGTSTTIVKPPLGFEGIVQVLSND----------- 140

Query: 179 YEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVS 238
           + I+ +        ++A ++  ++ T +    R I D+ +   ++           F  +
Sbjct: 141 FPIYRFAAAGLSLLMAAGVLAIVQWTPLGLRIRAIADDAEMAEAIGVDRSRLLWQVFGYA 200

Query: 239 SAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELC 298
           +   G AGA  A             S  I    +V+LGG+ SL       A++     + 
Sbjct: 201 AGLAGFAGALGAP--IFAVHPEMGLSILIDSFLVVVLGGLGSLKGSTIGAAVVSVTKAVG 258

Query: 299 CGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                                 T L+ + +  V++ R   +   
Sbjct: 259 GAY--------------LADWSTALLFLIVASVLVARPTGIFAT 288


>gi|331681722|ref|ZP_08382355.1| putative branched-chain amino acid transport system, permease
           component [Escherichia coli H299]
 gi|331080924|gb|EGI52089.1| putative branched-chain amino acid transport system, permease
           component [Escherichia coli H299]
          Length = 323

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 100/315 (31%), Gaps = 18/315 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +++  L LL VV  + L        +   +  +     +  + A GL  VV   G + ++
Sbjct: 7   RHEFWLALLIVVLFVGLAWRSDEFLTFGNLYDLANNYAMLTILACGL-FVVLISGGIDIS 65

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 I  Y  V+L  + G +  +   ++  I    G+I  L   + R   + I     
Sbjct: 66  FPAMTIIAQYGMVLLLQKMGGNFAVAFALAGGIGILLGLINALLVNRLRVPSIIIT---- 121

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                   I    I  G           +               +    Y+  +   L+ 
Sbjct: 122 --------ISTLNIFYGLLLWLSKGVWLYDFPPWFEQGVMLFKYTDADGYDYGLGLPLIA 173

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           M  +       +  T++      +  N+++   +  +++  +L  +       G AG   
Sbjct: 174 MITVVLLTAFIMNFTSVGRKIYALGGNRESASRIGFSVLKLQLFVYGYMGLMSGAAGVVQ 233

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           + +   ++PD     E  ++ ++V     +LGG  +L+       +L  +      +   
Sbjct: 234 SWTVMTVAPDSLLGYELTVLAAVVLGGTSLLGGRGTLTGTLLGVVLLAVMQNGLNLLGVS 293

Query: 305 YFNSLLKFDCSFNMR 319
            +   L         
Sbjct: 294 SYWQTLITGIIIVAS 308


>gi|226946400|ref|YP_002801473.1| inner-membrane translocator [Azotobacter vinelandii DJ]
 gi|226721327|gb|ACO80498.1| Bacterial inner-membrane translocator [Azotobacter vinelandii DJ]
          Length = 293

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 92/305 (30%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +   +Y + A G  ++  + G+ +          A ++ +     GL   L + +
Sbjct: 8   LIGGLLAGTMYSLVAIGFVLIYKASGVFNFAQGAMLLFAALTF-VSLQEQGLPFALALLL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++     +++    L+   +   I   + +     ++        G            
Sbjct: 67  TVVVMAIGAIVIERTVLRPLVNRSQITLFMATLGLSFVIEGLAQGLMGAQ---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         V+   F          L A + L   RT I  + R + D+ +
Sbjct: 117 -VRALDLGIEDVPLFLGEVMVSQFDLVAAATAAVLVAVLALLFNRTRIGVSLRAVADDTR 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  S+   +       +AV+     +AG  + A +             +  + ++I+GG 
Sbjct: 176 AALSIGINLNRIWQIVWAVAGVVGLVAGLLWGARQGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+     L       Y    +    +              + + +R   
Sbjct: 233 TSIGGAIAGGLIVGAAENLAEVYLGPYIGGGITPWFA---------YFLALVFLYIRPAG 283

Query: 339 LLRLR 343
           L   R
Sbjct: 284 LFGER 288


>gi|225018045|ref|ZP_03707237.1| hypothetical protein CLOSTMETH_01981 [Clostridium methylpentosum
           DSM 5476]
 gi|224949191|gb|EEG30400.1| hypothetical protein CLOSTMETH_01981 [Clostridium methylpentosum
           DSM 5476]
          Length = 334

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 97/312 (31%), Gaps = 18/312 (5%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I  +  V   L   +     +S   + S+          A G++ V+   G + L+    
Sbjct: 23  IAVIALVAIYLFFAIASKDFRSWSTLVSIFDMSYYIGFMAIGVTFVI-ITGGIDLSIGTV 81

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
                        + G+ I L + ++ +I    G++ GL     +         I +   
Sbjct: 82  CICSGLIGG-QLYKMGVPIALCLIITILIGIVFGLLNGLMVSIMKLPAF-----IATLGT 135

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +      I  G   I    R    G          +  +  +   I +  +++    +
Sbjct: 136 MMVTRGLGSIVTGTQSITYPLRTDPDGWYSSLFRIDVKTANGVMPIPIGIILLIVAAIIM 195

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
           +  +     +T        +  N++A       ++  +  A+ +S  F G+AG  +A++ 
Sbjct: 196 AVIL----NKTRPGRYILALGSNKEATRLSGVNVVKWETLAYMISGLFAGIAGIAYASTY 251

Query: 254 DRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
             +          +  I+ V++      GG+ S++       I+  +      +      
Sbjct: 252 FTL-MPGTGNGFELDAIAGVVIGGTSLSGGVGSVAGTMIGVFIMSVLKTGLPFVGLQPHY 310

Query: 308 SLLKFDCSFNMR 319
            L        + 
Sbjct: 311 QLFITGLVLIVA 322


>gi|90418661|ref|ZP_01226572.1| putative permease component, ABC-type sugar transporter
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90336741|gb|EAS50446.1| putative permease component, ABC-type sugar transporter
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 332

 Score = 49.5 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/316 (10%), Positives = 91/316 (28%), Gaps = 23/316 (7%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
              + +  +   L L L   +  + + + ++   +    + A G+++V+   G + L+  
Sbjct: 25  TFWVVVALLAACLYLSLATDSFATSRNLYNISRNVTFTAIIALGMTLVI-ISGGIDLSVG 83

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               + +    ++                    +  + +                LI   
Sbjct: 84  SVLCLCSMVLAVVMH---------------AGYSIEIGIAAAIGTALLVGAFNGILIAYL 128

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            F   ++    ++  ++   V      +        +          + I    + + + 
Sbjct: 129 DFPPFVVTLGMLSLARSLAMVVSNNTVVFEFGPDHDQLLALGGGAFFFGIANPVIYMVVL 188

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L    IL   R         I  N+ A       +   K++ + +S+   G+AG     
Sbjct: 189 ALITGFILRWTR--FGRHVFAIGGNEHAATLTGVPVRPIKVAVYMISALTAGIAGIIQTG 246

Query: 252 SRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
               ++ ++    E  ++ + VI      GG+ +        A++  +      +    F
Sbjct: 247 WLGAVTTNIGAGMELQVIAAAVIGGANLAGGVGTAFGALVGAALIEVIRNSLGLLGINAF 306

Query: 307 NSLLKFDCSFNMRHTT 322
                   +  +    
Sbjct: 307 WQGAFIGGAIILAVLF 322


>gi|329937723|ref|ZP_08287242.1| branched-chain amino acid ABC transport protein [Streptomyces
           griseoaurantiacus M045]
 gi|329303122|gb|EGG47010.1| branched-chain amino acid ABC transport protein [Streptomyces
           griseoaurantiacus M045]
          Length = 298

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 79/296 (26%), Gaps = 19/296 (6%)

Query: 48  IYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACG 107
           +Y + A G  IV  + G+L+        +G Y   +L    G +  L   V A    A  
Sbjct: 17  VYALVALGFVIVFRASGVLNFAHGSLLLLGGYLTAVLHGPLGFAGALAAAVLATALTAGA 76

Query: 108 MIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI 167
           +   L          A    I +     +L        G               T+    
Sbjct: 77  VDRLLLRGDGTEPGTAHVRTIATLGVDLLLATELTRRIGGD-----------LLTLGDPW 125

Query: 168 RFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTI 227
                    V         L        ++    R T    + R   ++ +A   +   +
Sbjct: 126 GDAVTTLGPVTVADSRLAALAVSAVAIGAVFALFRLTPWGLSLRAAAEDTEAAALMGIRL 185

Query: 228 IFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKA 287
              +  A    +  +    A F A+      +       +      +LGGM S       
Sbjct: 186 ARVRTLA-WCLAGALAALAAVFLAAFPAPGLERTTGQIALKAFPAAVLGGMASPGGALAG 244

Query: 288 TAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
           +A++     L  G           F               + LV+L+R   L   +
Sbjct: 245 SALIGLTEALVAGYQTQLHVLGEGFADVAP-------YAVMVLVLLVRPTGLFGAK 293


>gi|306846330|ref|ZP_07478887.1| high-affinity branched-chain amino acid transport system permease
           protein [Brucella sp. BO1]
 gi|306273229|gb|EFM55108.1| high-affinity branched-chain amino acid transport system permease
           protein [Brucella sp. BO1]
          Length = 285

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 90/307 (29%), Gaps = 31/307 (10%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + S      +Y   A   +++  +  +LS+       +G           G  IW+ +P+
Sbjct: 5   LISGLALGCLYATVALSYNVMYSTSKVLSMGAGQFAMVGGIVGAWTLGDLGGPIWVSLPL 64

Query: 99  SAMISGACGMIMGLPSLKFRGD-YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
             ++    G +  L +++   +       ++ +     I+ +   +  G         + 
Sbjct: 65  VIVVGLIFGWLTELVAIRRTMNGGDDHLWILSTLAVATIVQQGMALWWGTEPRPFPRLIP 124

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                +                    +  ++    ++  + L+ R+TAI   +  + D+ 
Sbjct: 125 QDYAGILDQKY---------------WLPIVTAFLMAGGLALFYRKTAIGKIFVALADDT 169

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG 277
            A  +   +    +  ++A++ A   +AG                 +  +     + +GG
Sbjct: 170 FAVSARGISATRMRSLSYAIAGALGALAGFMTGQLTYA--YFALGLTLTLNGFIALAIGG 227

Query: 278 MTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSH 337
           + S         I   V      +    F   +                 L L++     
Sbjct: 228 IGSNIGALAGGIIFGVVTTCVAYVFGSEFQQTIAVGT-------------LVLLLTFIPS 274

Query: 338 SLLRLRT 344
            L   + 
Sbjct: 275 GLFGKKR 281


>gi|296111345|ref|YP_003621727.1| ABC transporter, permease protein [Leuconostoc kimchii IMSNU 11154]
 gi|295832877|gb|ADG40758.1| ABC transporter, permease protein [Leuconostoc kimchii IMSNU 11154]
          Length = 378

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 83/309 (26%), Gaps = 1/309 (0%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
            L   A  S + +  +  Q+   ++ A G + V  + G  ++        G    +    
Sbjct: 39  ALLGSAFGSMQDVGGVLTQMTPLILTALGFT-VAQTAGFFNIGLSGQALAGWVGAIWYSL 97

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
            +      L+  SA+I GA    +      +       + +I++ +   IL+        
Sbjct: 98  SFPNMPAYLMIPSALIIGAGLGALAGAIPGWLRAQFGASEVIVTIMMNYILLFLGNNILQ 157

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
                           V +         + +     +   +     +   +   + +T +
Sbjct: 158 NTMSKGIKESAETTKQVGANASLQMKWLTDLTQGSSISAGIFISLMMIVVVWFIMTKTTL 217

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
               R +  N  A      +     + A A+S    G+AG                    
Sbjct: 218 GFEIRAVGLNPDAAKYAGMSAKRNAVVAMAISGGLAGLAGTIEGLGNYLNFFTQNGSPSI 277

Query: 267 IIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
                 V L G  S   I  A  IL  +     GM           D         +   
Sbjct: 278 GFDGMAVALLGGGSYLGILGAAVILSVLKIGGLGMPMSSGVPFELVDIVTASIIFFVGAS 337

Query: 327 ALFLVILMR 335
            L  ++  R
Sbjct: 338 YLIKLMQAR 346


>gi|238749987|ref|ZP_04611491.1| Monosaccharide-transporting ATPase [Yersinia rohdei ATCC 43380]
 gi|238711916|gb|EEQ04130.1| Monosaccharide-transporting ATPase [Yersinia rohdei ATCC 43380]
          Length = 312

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 103/311 (33%), Gaps = 18/311 (5%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           +L    ++    L        +   I  +     +  + A GL IV+   G + ++    
Sbjct: 1   MLAFTLLIISTYLAFTSPEFLTLANIYDLINNYAMLTILACGLFIVL-ISGGIDISFPAM 59

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             I  Y  V L  ++G +  +   ++  I    G+I  L   + R   + I    ++  +
Sbjct: 60  TIISQYVMVTLIVKFGGNFPVAFALAGGIGLLLGLINALLVNRLRVPSIIITISTLNIFY 119

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
             +L   + I       +          T                Y+  +   +L +   
Sbjct: 120 GLLLYFSRGIWLYTYPEWFEHGPMLFSFTAAD------------GYDYGLSLPILTLLAT 167

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
                L + RT+I      +  NQ+A   +  +I+  +L  +       G+AG   + + 
Sbjct: 168 IIVTALLMTRTSIGRQIYALGGNQEAASRMGFSILKLQLFVYGYMGFLSGIAGVVQSYTV 227

Query: 254 DRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
             ++PD     E  ++ ++V     I+GG  +L+       +L  +      +    +  
Sbjct: 228 LTVAPDSLLGYELTVLAAVVLGGTSIVGGRGTLTGTLLGVILLAVLQNGLNLLGISSYWH 287

Query: 309 LLKFDCSFNMR 319
            +       + 
Sbjct: 288 TVVIGLVIVIS 298


>gi|49186638|ref|YP_029890.1| branched-chain amino acid transport system, permease component,
           C-terminus [Bacillus anthracis str. Sterne]
 gi|49180565|gb|AAT55941.1| branched-chain amino acid transport system, permease component,
           C-terminus [Bacillus anthracis str. Sterne]
          Length = 344

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 87/275 (31%), Gaps = 12/275 (4%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILG-----SRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
            G++++        GA+  ++       +R  ++ W+ +  +A+ SG   ++  + S+ F
Sbjct: 59  SGVVNIALEGLMLFGAFIGIVTTLLMGDTRGSMTPWIALLFAAIGSGLFALLHAVASITF 118

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           R D +     I        +   K I       ++  R+  +     S I          
Sbjct: 119 RADQVVSGVAINFLALGLTVFAIKKIFGKGQTDFIQYRIEKIDVPGLSDIPVIGKIFFSN 178

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
           +       ++L              +T      R + ++  A  ++   +   +  A A+
Sbjct: 179 VPLTSYIAIILAFVVWYVI-----YKTPFGLRLRAVGEHPMAADTMGINVYKMRYIAVAI 233

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           S  F G+ GA FA S            +  + ++ +I  G  +        A+  G  + 
Sbjct: 234 SGMFAGVGGAVFAMSISGNFSGATITGQGFLALAAMIF-GKWNPLGA-LGAALFFGFAQS 291

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI 332
                               +      ++AL   +
Sbjct: 292 LGITGGTIPVLKEIPSVFLTILPYVFTILALVGFV 326


>gi|320644359|gb|EFX13424.1| inner membrane ABC transporter permease protein YjfF [Escherichia
           coli O157:H- str. 493-89]
 gi|320649677|gb|EFX18201.1| inner membrane ABC transporter permease protein YjfF [Escherichia
           coli O157:H- str. H 2687]
          Length = 331

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 46/334 (13%), Positives = 99/334 (29%), Gaps = 24/334 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++ N    I   + V+  L          S + I ++        + A G++ V+   G 
Sbjct: 2   IKRNLPLMITIGVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVI-LSGG 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A        +   +GLS  L  P+  ++  A G  MGL S   +     I 
Sbjct: 61  IDLSVGSVIAFTGVFLAKVIGDFGLSPLLAFPLVLVMGCAFGAFMGLLSDALKIPAFIIT 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L     +      +                   ++ P    +  + +  
Sbjct: 121 -----------LAGMFFLRGVSYLVSEESIPINHPVYDTLSSLAWKIPGGGRLSAMGLLM 169

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + +         I    RT   N    I  N  +   +  +     +  + +S+    +A
Sbjct: 170 LAVV-----VIGIFLAHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLA 224

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  F+         +      +  I+ V++GG         +  +   +  L        
Sbjct: 225 GIVFSIYTQ-AGYALAGVGVELDAIASVVIGG------TLLSGGVGTVLGTLFGVAIQGL 277

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
             + + FD + +   T + +  L  + +     L
Sbjct: 278 IQTYINFDGTLSSWWTKIAIGILLFIFIALQRGL 311


>gi|222084284|ref|YP_002542813.1| sugar ABC transporter [Agrobacterium radiobacter K84]
 gi|221721732|gb|ACM24888.1| sugar ABC transporter [Agrobacterium radiobacter K84]
          Length = 318

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/331 (11%), Positives = 96/331 (29%), Gaps = 36/331 (10%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSL 68
           N+    +  + V++ +   +      + + + ++     I    A G ++++     + L
Sbjct: 7   NQGLGAIVGVVVMFAVFTVIDFSGWWTVQTVSNVTQFTAILAFVAMGQALII-ITREIDL 65

Query: 69  NCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLI 128
           +    Y +         +   +   L +P S +++       GL            + ++
Sbjct: 66  SVGSVYGLTG------VAFITMEPALGVPGSLVLALVIAAAAGLVQGIAVVKGQLPSMIV 119

Query: 129 MSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLL 188
                          T G                     R              +   + 
Sbjct: 120 TLGGLFTARGIIYVWTGGS------------VHNFSPDARSHPLTLLLGGSLFGVEAAIY 167

Query: 189 GMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAF 248
            +  ++A + L L  T   N       ++++  S        K++ F + S   G AG  
Sbjct: 168 WLILVAAVLALVLWLTPFGNRLLATGGSRESAESRGVQTDRIKIATFILCSLLAGFAGIL 227

Query: 249 FAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNF 303
              ++ +    + +  E   + + VI      GG  S+        I++ +      +  
Sbjct: 228 TLCNQPQTHVTLGENMELEAIAAAVIGGCLLTGGRGSILGTILGALIVVSLRYELIALG- 286

Query: 304 YYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
                      + +  + T +   L + I+ 
Sbjct: 287 -----------APSSWYITFVGAVLIIAIIF 306


>gi|170699337|ref|ZP_02890385.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria
           IOP40-10]
 gi|170135767|gb|EDT04047.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria
           IOP40-10]
          Length = 362

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 91/309 (29%), Gaps = 27/309 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILI----YVMFAWGL 56
           M+ F  RL     +  ++ +V    LF F     +  +   +   +L+     ++ A G+
Sbjct: 1   MNRFLARLADPRTLPIVVTIVLFAALFGFGSVMYTGFFSMQVLTGLLVDNAFLLIVAIGM 60

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLK 116
           + V+   G + L+     A+      +   R    +W ++P+  +     G  MG     
Sbjct: 61  TFVI-VSGGIDLSVGSVVALTTIFCAVGAERLHWPVWAIVPLVLVFGALYGAAMGALIHY 119

Query: 117 FRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSF 176
           FR     +    M        +                 +     T+           S 
Sbjct: 120 FRLQPFIVTLAGMFLARGACFL-----------------ITTQSITINEPTFHALAGISV 162

Query: 177 VIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFA 236
            I    +    L      A+ I     T        I  N+++   +   +   K+  +A
Sbjct: 163 PIGGGTLSAGALIALATLAAAIYVAHFTRFGRNVYAIGGNERSALLMGLPVARTKVGVYA 222

Query: 237 VSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAIL 291
           +S     + G  F            +  E   + + VI      GG+  +        IL
Sbjct: 223 LSGFCSALGGVVFTLYVLSGYGLQAQGMELDAIAATVIGGTLLTGGVGYVIGSVFGVGIL 282

Query: 292 IGVVELCCG 300
             +  L   
Sbjct: 283 GTIQVLITF 291


>gi|23336442|ref|ZP_00121659.1| COG1172: Ribose/xylose/arabinose/galactoside ABC-type transport
           systems, permease components [Bifidobacterium longum
           DJO10A]
 gi|189438910|ref|YP_001953991.1| ribose/xylose/arabinose/galactoside ABC transporter permease
           [Bifidobacterium longum DJO10A]
 gi|312132351|ref|YP_003999690.1| arah1 [Bifidobacterium longum subsp. longum BBMN68]
 gi|189427345|gb|ACD97493.1| ABC-type ribose/xylose/arabinose/galactoside transport systems
           permease component [Bifidobacterium longum DJO10A]
 gi|311774022|gb|ADQ03510.1| ArAH1 [Bifidobacterium longum subsp. longum BBMN68]
          Length = 356

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 105/322 (32%), Gaps = 31/322 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKY-------IDSMGIQILIYVMFAWGLSIVVGSL 63
           +  +  +L V+   +      A             + +M  +   Y+M A G+++V+ + 
Sbjct: 23  WSIVAFILLVIICTIFQHDFLALSWNSNTGGLAGPLITMLQESARYLMIATGMTLVISTA 82

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G + L+     A+   +  +     G+++WL I ++  +  A G + G            
Sbjct: 83  G-IDLSVGSVMAVAG-AAAMQTLSNGMNVWLSILIALAVGLAIGCVNGALVSFLGLQPFI 140

Query: 124 IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
              ++M             +        +        + V        F + F++     
Sbjct: 141 TTLIMM-------------LAGRGMAKVITSGENTDASAVAGNEPLKWFANGFILGIPAN 187

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
           + + + +  L   +    R+TA+      +  NQ+A               +A+S     
Sbjct: 188 FVIAVIIVILVGLL---CRKTAMGMMIEAVGINQEASRMTGIKPKKILFLVYAISGFLAA 244

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT------SLSKIAKATAILIGVVEL 297
           +AG F  AS  R+          +  I  V++GG +      SL+  A    I+  + + 
Sbjct: 245 IAGLFATASVMRVDVVKTGQDLEMYAILAVVIGGTSLLGGKFSLAGSAVGAVIIAMIRKT 304

Query: 298 CCGMNFYYFNSLLKFDCSFNMR 319
              +      +   F     + 
Sbjct: 305 IITLGVNAEATPAFFAVVVIVI 326


>gi|260430394|ref|ZP_05784367.1| ribose transport system permease protein RbsC [Citreicella sp.
           SE45]
 gi|260418423|gb|EEX11680.1| ribose transport system permease protein RbsC [Citreicella sp.
           SE45]
          Length = 334

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 87/303 (28%), Gaps = 18/303 (5%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
                   S   I ++  +     + A G++ V+ + G L L+     A  A   +++ +
Sbjct: 36  MALNSNFLSYANITNVLARSAFIGIIAVGMTFVI-TAGGLDLSVGSMAAFVAGLMILVMN 94

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
               ++ + +PV  +      +   +           +           + I    IT  
Sbjct: 95  LLTENMGVTLPVILIGIALALLAGLVAGFINGILITRVGIEAFIVTLGTMGIYRSLITWL 154

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             G  ++                             + + ++    ++    + +R TA 
Sbjct: 155 ADGGTLSLGFEMRELYRPVYY----------GGIAGISWPIISFVVVAVLGEIVMRHTAF 204

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
                 I  N+K     + +++  +L+ + +    +G A   +       S         
Sbjct: 205 GRHCAAIGSNEKVARYSSISVLKVRLATYVLLGLLVGFAVVMYVPRLGSAS-ASTGLLWE 263

Query: 267 IIVISIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRH 320
           +  I+ VI+      GG   +        IL  +  +    +F           +  +  
Sbjct: 264 LEAIAAVIIGGTLLKGGFGRVWGTVVGVLILSLIGNILNLTDFVSPYLNGAIQGAVIILA 323

Query: 321 TTL 323
             L
Sbjct: 324 VVL 326


>gi|261341807|ref|ZP_05969665.1| hypothetical protein ENTCAN_08291 [Enterobacter cancerogenus ATCC
           35316]
 gi|288316180|gb|EFC55118.1| D-xylose ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 393

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/355 (11%), Positives = 96/355 (27%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +     ++  G+  S + + ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 32  MIAAIIAIMLFFTWMTDGSYLSARNVSNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 90

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
             +      I     G  + L + V+ ++    G   G      +     +    M    
Sbjct: 91  MGLLGGVAAIFDVWLGWPLPLTVAVTLVLGLLLGAWNGWWIAYRKVPSFIVTLAGMLAFR 150

Query: 134 QNIL--------------------IKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFP 173
             ++                               G+             R   +     
Sbjct: 151 GILIGITNGTTVSPTSAAMSQIGQSYLSDGIGFTIGVVGLMAFIAWQWRGRMRRQALGLA 210

Query: 174 SSFVIYEIFMYYVLLGMCFLSASI---------------------ILWLRRTAISNAWRT 212
           +      +    +   +   +  +                     +    RTA       
Sbjct: 211 APASTAVVGRQALTAAIVLGAIWLLNDYRGVPTPVLLLALLLLGGMFMATRTAFGRRIYA 270

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N +A       +   KL+ FA++   + +AG   ++     SP     +E   + + 
Sbjct: 271 IGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAAC 330

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      M+   F   +       +    
Sbjct: 331 VIGGTSLAGGIGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWM 385


>gi|217959437|ref|YP_002337987.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus AH187]
 gi|217066051|gb|ACJ80301.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus AH187]
          Length = 284

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 103/305 (33%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  +  LI  
Sbjct: 6   FVNGISTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYVLALIGA 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 66  IAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKVFWGPN 113

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L     F    VI   +  +V++    +  +++L L++T I    R    +++
Sbjct: 114 PIGAKLPLWLQGSFTFGGVILIKYRLFVIIIGVIIYIALLLLLKKTKIGLMIRAGVMDKE 173

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 174 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++ + 
Sbjct: 233 GSVQGSAIASLIVGLAGAFTAYF--------------IPDLSLAINMLMLLFFLIVKPNG 278

Query: 339 LLRLR 343
           L+  +
Sbjct: 279 LVGEK 283


>gi|152995891|ref|YP_001340726.1| monosaccharide-transporting ATPase [Marinomonas sp. MWYL1]
 gi|150836815|gb|ABR70791.1| Monosaccharide-transporting ATPase [Marinomonas sp. MWYL1]
          Length = 376

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 46/359 (12%), Positives = 93/359 (25%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   +L  + ++         GA  S + I ++  Q  I  + A G+  V+ S   + L+
Sbjct: 11  QLFAMLAAMLLIVVFFSIATDGAFISPRNISNLIRQTAIVGVLAIGMVFVIISA-EIDLS 69

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +      IL   +   I L + V+ +     G+  G      R     +    M
Sbjct: 70  VGSMMGLLGGIAAILDVWFNFPILLTVLVTVVAGLVLGLFNGWWVAYQRVPSFIVTLAGM 129

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF------- 182
                 ++      T       +A        +   +          V            
Sbjct: 130 LAFRGILVGLTDGATVAPTSSSLAIIGQSYIPSGWGISVVGLLCLGLVAKVYARRKARKQ 189

Query: 183 ----------------------------------MYYVLLGMCFLSASIILWLRRTAISN 208
                                             +   +L M  L        +RTA   
Sbjct: 190 HGVENKAAKFEYAKAFVAVVVLLVLLYALESYRGIPTPILIMGGLILIATYVAKRTAFGR 249

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               I  N +A       +   K+  F  +   + +A     +     SP     +E   
Sbjct: 250 RVYAIGGNIEATRMSGVNVERTKMLVFGFNGMMVAVAALILTSRLGAGSPAAGNMAELDA 309

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + + VI      GG+ ++        I+  +      ++   F  L+       +    
Sbjct: 310 IAACVIGGTSLAGGVGAVFGAIMGALIMASLDNGMSMLDVPTFWQLIVKGMILLLAVWL 368


>gi|42781082|ref|NP_978329.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus ATCC 10987]
 gi|206977486|ref|ZP_03238381.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus H3081.97]
 gi|222095580|ref|YP_002529637.1| branched-chain amino acid ABC transporter , permease protein
           [Bacillus cereus Q1]
 gi|229138661|ref|ZP_04267243.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus BDRD-ST26]
 gi|42737003|gb|AAS40937.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus ATCC 10987]
 gi|206744336|gb|EDZ55748.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus H3081.97]
 gi|221239638|gb|ACM12348.1| branched-chain amino acid ABC transporter, permease protein
           [Bacillus cereus Q1]
 gi|228644780|gb|EEL01030.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus BDRD-ST26]
          Length = 286

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 103/305 (33%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  +  LI  
Sbjct: 8   FVNGISTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYVLALIGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 68  IAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKVFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L     F    VI   +  +V++    +  +++L L++T I    R    +++
Sbjct: 116 PIGAKLPLWLQGSFTFGGVILIKYRLFVIIIGVIIYIALLLLLKKTKIGLMIRAGVMDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++ + 
Sbjct: 235 GSVQGSAIASLIVGLAGAFTAYF--------------IPDLSLAINMLMLLFFLIVKPNG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|326333807|ref|ZP_08200040.1| amino acid or sugar ABC transport system [Nocardioidaceae bacterium
           Broad-1]
 gi|325948389|gb|EGD40496.1| amino acid or sugar ABC transport system [Nocardioidaceae bacterium
           Broad-1]
          Length = 294

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 80/289 (27%), Gaps = 25/289 (8%)

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
            G + ++ +       + AY       + GL   L + ++  +  + G  M    L    
Sbjct: 31  FGVMRVVMIAHSAFLILAAYLAWFFTQQTGLDPLLSLFITVPLFFSAGYGMQRALLSR-- 88

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
             L  ATL M  +     I             +          ++               
Sbjct: 89  --LRPATLTMMSVLLTFAIALVIEGG------LGYLFSGTQRRIQLGYSGASLELWGARI 140

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
            +              ++ L L++T    A R    +++A   L           F +  
Sbjct: 141 AVVKLIAFGLAAISLLALFLLLKKTRFGQALRATIQHREAAQLLGIDTDRIAGFGFGLGL 200

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A   + G   A            +     +++I+++GG+ S+   A A  +L     L  
Sbjct: 201 ATAAVGGTALALDATI--YPSLHWHWIGPLMAIIVIGGLGSIPGAAIAAMLLGVTQALLQ 258

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLRTPSNF 348
                                 T+  IALF  ++ R       R    F
Sbjct: 259 -------------IPMGTTWAQTVFYIALFATLMFRPQGFFGGRLAQRF 294


>gi|307726404|ref|YP_003909617.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
 gi|307586929|gb|ADN60326.1| inner-membrane translocator [Burkholderia sp. CCGE1003]
          Length = 286

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 107/304 (35%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++Y + A GLSIV G L  ++      Y +GAY       ++ +S W  + +
Sbjct: 8   IVNGIGVGMLYFLLAVGLSIVFGLLRFVNFAHGAFYLLGAYFCY-QAMQWSVSFWAALVI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++ GA   ++    L+          ++++     ++ +   +  G  G  V      
Sbjct: 67  VPVVVGALAWVVEKLVLRHVYAQQHEFHILVTVGLALVVQECAILVWGPLGDNVPVPDVL 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  +              +Y  +  +V+     L+A +   L  T + +A R   ++ +
Sbjct: 127 NGVVI----------WGSFVYPKYRLFVIGFTAVLAALLWWVLEGTRLGSAVRAGSESTE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   ++      FA+ +A   +AG   A  R        +      V+ +V    M
Sbjct: 177 MVSLLGINVLRVFSLVFALGAATAALAGVLAAPIRGVDPFMGIEALGVAFVVVVVGG--M 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +         ++  V  +   +              +      ++ +A+  V+L+R + 
Sbjct: 235 GNFLGALVGGLLVGIVQSVMSTL--------------WPEGARLMIYVAMAAVLLLRPNG 280

Query: 339 LLRL 342
           LL  
Sbjct: 281 LLGR 284


>gi|302551148|ref|ZP_07303490.1| sugar transport permease [Streptomyces viridochromogenes DSM 40736]
 gi|302468766|gb|EFL31859.1| sugar transport permease [Streptomyces viridochromogenes DSM 40736]
          Length = 414

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/350 (12%), Positives = 82/350 (23%), Gaps = 55/350 (15%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R  +   +L  L ++  L      G     + + ++ +Q    ++ A G+ +V+   G +
Sbjct: 36  RNMRQYGMLIALGLIVVLFAVWTDGDLLLPRNVSNLVLQNSYILILAIGMMLVI-IAGHI 94

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A       +   ++ +   L + +   +    G I G            +  
Sbjct: 95  DLSVGSLTAFVGSMAAVFMVKHDIPWVLAVVLCLAVGAVAGAIQGFFIAYGGIPSFIVTL 154

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
             M        I  +  T G     +          V     +           I     
Sbjct: 155 AGMLIFRGLTEIFLEGQTLGPFPEGLQKVANGFLPEVGPKTNYHNLTLLLGFAMIAFVIF 214

Query: 187 -------------------------------------------------LLGMCFLSASI 197
                                                            LL +  L    
Sbjct: 215 QEVRDRKRQQEFDLDVPPTKLFLLKLVAIAAAVLTLTMLLASYKGAPIVLLILGVLLVGF 274

Query: 198 ILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRIS 257
              +R   I      I  N  A               F        +AG  FAA  +  S
Sbjct: 275 GYVMRNAIIGRHIYAIGGNLPAAKLSGVKDKKVTFLVFLNMGMLAALAGLVFAARFNAAS 334

Query: 258 PDMFKFSENIIVIS-----IVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           P      E   + +       + GG+ ++        +L  +      + 
Sbjct: 335 PKAGLNFELEAIAASFIGGASMSGGVGTVLGAIIGGLVLGVLNNGMNLVG 384


>gi|196037832|ref|ZP_03105142.1| putative ribose ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
 gi|196031102|gb|EDX69699.1| putative ribose ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
          Length = 317

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 89/297 (29%), Gaps = 27/297 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L ++Y  ++ +   +      +  M    +I V+ A G S V+     + ++   + 
Sbjct: 12  IITLLLIYIAIVGMINPSFIQFNSLSLMVKSSVILVVLAIGQSFVL-FTKNIDVSVGSSM 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A    +L +             ++ +      +             +  +IM+    
Sbjct: 71  GLSAAVCGMLLTNEYS------ASLSIFAAITLGAIIGFVNGIGVAKFRVPAIIMTLGML 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I+     I  G   I                     F     I  + +   +  +  + 
Sbjct: 125 GIIRGAMLIFTGGKWIEDIP---------------NNFKQLSSIVILGLPITVWFVLIIL 169

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +  +LR+      +  + DN+     +   +   K+ AF +S     +AG  F  +  
Sbjct: 170 LPLYFFLRKVPFGRYFYAVGDNEDGARLIGIPVNKVKICAFIISGISAALAGCIFVMNIG 229

Query: 255 RISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
            I        E  ++ + V+      GG  SL   A     L  +      +    F
Sbjct: 230 FIPNQTGTGLELQVIAAAVLGGIHLKGGTGSLFGAALGALFLETISSSLVFLKIPAF 286


>gi|167772937|ref|ZP_02444990.1| hypothetical protein ANACOL_04325 [Anaerotruncus colihominis DSM
           17241]
 gi|167664870|gb|EDS09000.1| hypothetical protein ANACOL_04325 [Anaerotruncus colihominis DSM
           17241]
          Length = 391

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/345 (10%), Positives = 85/345 (24%), Gaps = 55/345 (15%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            ++ ++ +   L+     G+  +   I ++ +Q    V+ A G+ + + + G + L+   
Sbjct: 16  ALVVVMVLFQVLISAAGKGSLFAPANITNLILQNSYVVILAVGMLLCILTGGNIDLSVGS 75

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
             A+      ++     ++++L I V  ++    G   G      R     +    M   
Sbjct: 76  VVALVGAIAGVMIVNNKMNVYLTIAVCLIMGILIGAWQGFWIAYVRIPAFIVTLAGMMLW 135

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL----- 187
               LI    +T                             +  V   +   YV+     
Sbjct: 136 RGLALIVLDGLTISPFPEDYLKYFSSFLPNTADNKGLVFGVTIAVGAILCAVYVVSQLIE 195

Query: 188 ---------------------------------------------LGMCFLSASIILWLR 202
                                                        + +  +      + +
Sbjct: 196 RGKKVRKNYELEPAGMLWGRLAVICVAAMALSFLLGKNKGIPVVLILLGVIVLVYSYYTQ 255

Query: 203 RTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFK 262
            T        +  N+KA              A+        +A     A  +  +P    
Sbjct: 256 NTVPGRYLYAMGGNEKAAKLSGINTNRTLFFAYTNMGFLSAVAALVCIARFNSAAPSAGT 315

Query: 263 FSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
             E   + +  I      GG  ++         +  +      + 
Sbjct: 316 NYELDAIGACYIGGASAYGGTGTIGGAVIGAIFMGVLNNGMSILG 360


>gi|113460729|ref|YP_718796.1| D-xylose ABC transporter permease [Haemophilus somnus 129PT]
 gi|112822772|gb|ABI24861.1| xylose ABC transporter membrane protein [Haemophilus somnus 129PT]
          Length = 357

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 49/350 (14%), Positives = 102/350 (29%), Gaps = 47/350 (13%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGA 78
            V+         GA  S + I ++  Q  I  + A G+  V+ S   + L+      +  
Sbjct: 1   MVIMFFFSIATEGAYLSARNISNLLRQTAITGILAIGMVFVIISA-EIDLSVGSLMGLLG 59

Query: 79  YSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM--------- 129
               I    +G  + L I V+ ++    G   G      +     +    M         
Sbjct: 60  GFAAISNVWWGWPLPLTILVTLLLGLLIGAWSGWWVAYQKVPSFIVTLAGMLAFRGILIG 119

Query: 130 -------------------------SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVR 164
                                      I    +I +  I  G         L      + 
Sbjct: 120 LTNGTTVSPISNDMTIIGQGYLSDTIGIILGSIIIFCFIAWGSYQRKARQNLNLPVAKMP 179

Query: 165 SLIRFFRFPSSFVIYEIFMY-------YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
                +   +  ++  I++          +L +C L+       ++TA       I  N 
Sbjct: 180 KETVKYGMIAILILGAIYLLNDYRGMPIPVLILCGLAIIGTFISKKTAFGRHIYAIGGNI 239

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI--- 274
            A       +   KL+ FA++   + +AG   ++     +P   + +E   + + VI   
Sbjct: 240 DAARLSGIAVEKVKLTIFALNGLLVAIAGLILSSRLGAGAPSAGQNAELDAIAACVIGGA 299

Query: 275 --LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
              GG+ S+  +     I+  +      ++   F   +       +    
Sbjct: 300 SLAGGIGSIFGVVIGAFIIALLDNGMSMLDVPTFWQYIVKGGILLLAVWI 349


>gi|88854643|ref|ZP_01129310.1| ABC transporter, membrane spanning protein (ribose) [marine
           actinobacterium PHSC20C1]
 gi|88816451|gb|EAR26306.1| ABC transporter, membrane spanning protein (ribose) [marine
           actinobacterium PHSC20C1]
          Length = 340

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 84/301 (27%), Gaps = 27/301 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L ++ V   +   L L    +   + S+  +  +    A GL+ V+   G + L+     
Sbjct: 18  LVIMLVAVAVFGGLSLDDFLTVNTLQSVLDRATVVGFLALGLTPVL-IAGQIDLSIGSMM 76

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           ++   + + +    G        V+  I       + +   K       +ATL++     
Sbjct: 77  SMAGITTIFMQPVIGNVPAAAAGVAVGILIGAVNALMVVVFKINSLVATLATLLIFASLA 136

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            +L                       +   S             +   +          +
Sbjct: 137 LLLTN---------------------SYPLSSEDPIFGLPLTADFLWILTPRSAIFLIAA 175

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + +WL+ T        +  +  A  S          ++F +S  F G+AG   + S  
Sbjct: 176 VLMFVWLKLTPTGRNLYAVGSDASAATSSGINANGYIAASFVLSGFFAGLAGMMQSLSTA 235

Query: 255 RISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             SP          + ++VI      GG  S          L  +           +   
Sbjct: 236 AGSPVAGAVMLIPAITAVVIGGTRLEGGRGSSLATLGGVLALGALTTALEYNGVPSYTQA 295

Query: 310 L 310
           +
Sbjct: 296 I 296


>gi|306845381|ref|ZP_07477956.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Brucella sp. BO1]
 gi|306274297|gb|EFM56109.1| high-affinity branched-chain amino acid transport system permease
           protein livH [Brucella sp. BO1]
          Length = 309

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 108/311 (34%), Gaps = 22/311 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +  I  L+  M + GL+++ G +G+L+      Y +GAY       +     WL I +
Sbjct: 8   VLNGAIYGLLLFMVSAGLTLIFGMMGVLNFAHASFYMMGAYFAY--TLQPLTGFWLAILL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +I G  G+++    L+    +     L+++     ++ +   I  G          + 
Sbjct: 66  APVIVGIVGVLVERFILRRVHAFGHAHELLVTFGLSVVIAEVIKIFYGN---------FA 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
           +   + + ++F  F    V Y  +  ++      +   I L L RT I    R+     +
Sbjct: 117 VEYRIPAALQFSAFDLGGVSYPFYRLFIGAVALVMFLLIYLLLTRTRIGIVVRSAIYRPR 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM-----------FKFSENI 267
              +L   +    +  F V +   G+AG+   A                           
Sbjct: 177 MVEALGHNVPLVFMGVFGVGAFLAGLAGSVAGAFYTTNPNMALELGVMVFVVVVVGGLGS 236

Query: 268 IVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           +  ++     +  LS +A    + I  +    G+  Y            +    TL    
Sbjct: 237 LGGAMFASLLIGILSSVAVGVKVSIASLLDYVGLGDYAREIGGVLTLEVSSIAATLPFFL 296

Query: 328 LFLVILMRSHS 338
           + +V+L+R   
Sbjct: 297 MLIVLLVRPSG 307


>gi|238761716|ref|ZP_04622691.1| Amino acid or sugar ABC transport system, permease protein
           [Yersinia kristensenii ATCC 33638]
 gi|238700230|gb|EEP92972.1| Amino acid or sugar ABC transport system, permease protein
           [Yersinia kristensenii ATCC 33638]
          Length = 280

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 75/282 (26%), Gaps = 17/282 (6%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
               V+ A GL+++ G +G+++L        GAY  +++        + ++  +   +  
Sbjct: 9   FAYLVLAALGLAVIFGMMGVINLAHGEFIMCGAYVTILMNKAGLPLPFAMLAGTLAAAFF 68

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
            G+I  L      G                +             +  +  L    +    
Sbjct: 69  GGVIERLVVRHLYGR---------------LYDSVVATWAISLIVQQSMLLIAGPSLEGL 113

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
              F  F      +  +   +      +   +      T      R    N +    L  
Sbjct: 114 STPFGSFTLGEYSFATYRALLPFFAIAILMVLYWLFFHTNYGVCARATIQNARMAACLGL 173

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                    FA+ +   G+AGA +A +   +      F         V++GG   L    
Sbjct: 174 ETDRIYTLTFALGAGLAGLAGAIYAPTLTAVPTMGSSFIVQ--AFVSVVVGGANVLVGTI 231

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            A   L  +              +     +  +       I 
Sbjct: 232 PAAIALGAIQTGLNSWYGQLAGQVGLLVTAVLVIRLLPNGIG 273


>gi|209514996|ref|ZP_03263865.1| inner-membrane translocator [Burkholderia sp. H160]
 gi|209504622|gb|EEA04609.1| inner-membrane translocator [Burkholderia sp. H160]
          Length = 288

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/243 (12%), Positives = 72/243 (29%), Gaps = 14/243 (5%)

Query: 57  SIVVGSLGLLSLNCVIAYAIGAYSYVILGS--RYGLSIWLLIPVSAMISGACGMIMGLPS 114
           ++V G + ++++         A+  +++ S       +  ++PV+ +      +      
Sbjct: 25  AVVFGVMRVINVAHGEFIVGAAFVALLVTSLAPGMDPLIAIVPVAVIAFAVGYLFQTTLL 84

Query: 115 LKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPS 174
            K       +  ++++     ++        G                    +    F  
Sbjct: 85  NKVVRGGDMLPPMLITFGVSIVIRNLMLAGFGSN----------PMALRTGPLAQDSFSV 134

Query: 175 SFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSA 234
           + +   +     L     L +++   L RTA     R   DN      +           
Sbjct: 135 AGIHIGLLPLITLAISILLFSALQYVLVRTAFGRMVRATADNPDIVRLMGVNPTRIYGLV 194

Query: 235 FAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGV 294
             +S     +AG   A                +I   +V+LGG+ S+     A  +L  V
Sbjct: 195 MGISFVMASVAGVLLAMRTSF--SAASGVDRILIAFEVVVLGGLGSIWGALLAGILLGVV 252

Query: 295 VEL 297
             +
Sbjct: 253 QLM 255


>gi|73748713|ref|YP_307952.1| branched-chain amino acid ABC transporter,permease protein
           [Dehalococcoides sp. CBDB1]
 gi|147669472|ref|YP_001214290.1| inner-membrane translocator [Dehalococcoides sp. BAV1]
 gi|289432739|ref|YP_003462612.1| inner-membrane translocator [Dehalococcoides sp. GT]
 gi|73660429|emb|CAI83036.1| branched-chain amino acid ABC transporter,permease protein
           [Dehalococcoides sp. CBDB1]
 gi|146270420|gb|ABQ17412.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Dehalococcoides sp. BAV1]
 gi|288946459|gb|ADC74156.1| inner-membrane translocator [Dehalococcoides sp. GT]
          Length = 294

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 86/269 (31%), Gaps = 14/269 (5%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
           +YI +     L+Y + A G +++  S  + +L       I ++    + ++ G+ +WL  
Sbjct: 6   QYIITGITVGLVYSLIALGFTLIWKSSSVANLALGQMVLICSWFTYSMLAQVGMPLWLGF 65

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
               + + A G +M    L+       ++ + ++      L                   
Sbjct: 66  ICVVLFALALGWLMERIILRPLIGQPILSLVTVTLGVGFFLEGVVSFVW----------- 114

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                 +  +           +      +       L A + ++ +   +  A R   D+
Sbjct: 115 PQSVAAMPKIFPETPIHIGSAVISQEYVWAAGISLLLFALLTIFFKYHKMGVAMRATADD 174

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           Q+A  +    +      ++ ++     + G   ++        +      I   S+VILG
Sbjct: 175 QQAVQACGIPVTRIFSLSWMLAIVLAAVGGVLMSS---IGGITLGLVETGIKAFSVVILG 231

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G+ S      A  I+     L  G     
Sbjct: 232 GLDSFLGAMIAGPIIGLAENLGGGYLTAL 260


>gi|308189162|ref|YP_003933293.1| ABC transport system, permease protein [Pantoea vagans C9-1]
 gi|308059672|gb|ADO11844.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 336

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 92/313 (29%), Gaps = 25/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L  V   ++  L  G   S     ++  Q    ++ A  +++V+ + G + L+     
Sbjct: 30  IALFFVFCCVVFSLITGNFLSSANWLNIIRQSAPLLIVATAMTLVI-TTGGIDLSVGSTL 88

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      I  + +GL   +++    ++    G I G            +    ++ +  
Sbjct: 89  ALVGALSAIALNNWGLPWPVVLLGGLLLGALVGAINGFFIAYEGIPAFIVTLATLAVVRG 148

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+                 +    +        F F     +  + M  ++  +  + 
Sbjct: 149 VALL-----------------VTQGYSIPIPADSLFTFMGRAWVLGVPMPALIGIVVLVV 191

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I+L   R         I  N +             +  + +S     +AG    A   
Sbjct: 192 GHIVLNHMR--FGRYVTAIGANAEGARRSGINTKAVTMKVYILSGMAAALAGMIITARLG 249

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             S +  +  E  ++ ++V     + GG  ++         +  +       +   F + 
Sbjct: 250 SGSSNQGEGFELQVIAAVVLGSTSLFGGFGTVIGTLLGALSIAIIQNGLILSHISPFYTQ 309

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 310 IATGTIILLAIWL 322


>gi|237814447|ref|YP_002898898.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
 gi|237503317|gb|ACQ95635.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
          Length = 292

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 81/287 (28%), Gaps = 14/287 (4%)

Query: 37  KYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLI 96
            Y+ S      +Y +   GL ++  + G+L+       A+GAY                 
Sbjct: 8   PYLISGLGVGAVYALSGVGLVVLYRASGVLNFAFGATGALGAYVAAACLDADYPQALAWG 67

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
              A  + A  +   + + +       +   + +  F  +L+ +     G     +    
Sbjct: 68  AAVAASTAASLVYGLVLAPRLAARE-RVVRSVATLGFALVLLGFCEWYWGDTPRRLVLPT 126

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                    +   +       +    M  + + +            RT +    R + ++
Sbjct: 127 DSEALDFGDVRFTYTRIVGLALACAMMAAIGVVLA-----------RTRLGLHMRALSND 175

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILG 276
           +     L   ++    +A+A+S  F G+ G   A                I   +  I+G
Sbjct: 176 RHLSGVLGIRVLSVDAAAWAISGVFAGITGLLLANLVRL--QAAVLTFLVIPAFAAAIVG 233

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTL 323
            + SL     A   +     L   +  +             +    +
Sbjct: 234 WLASLPATVAAGVAIGLAEALAITVPGFAPYRSATPFLIALVAMLFI 280


>gi|307944447|ref|ZP_07659787.1| inner-membrane translocator [Roseibium sp. TrichSKD4]
 gi|307772196|gb|EFO31417.1| inner-membrane translocator [Roseibium sp. TrichSKD4]
          Length = 317

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 94/301 (31%), Gaps = 16/301 (5%)

Query: 43  GIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
            +  ++Y + A G  ++  + G+ +        + A   ++     G+  ++ + ++ ++
Sbjct: 28  FVAGILYALIALGFVLIFKASGVFNFAQG-IMVVFAGLTLVGLHENGVPAFVALGLTIVV 86

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
            G     +    ++   +   I  L+ +      LI +     G     +     +L   
Sbjct: 87  MGVLAYGIERVVMRPLVNQPDIILLMATIGLTYFLIGFGEFIFGGEPKRMIAEELWLP-- 144

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                 F       VI +       +    + A++ ++  +T I  A R + D+ +A  S
Sbjct: 145 -TGSTAFEFGERGLVILQHIDIAAAVIAIIMVAALGIFFNKTRIGRALRAVADDHQAALS 203

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +  ++       +  +       G  + A                  + ++ILGG TS+ 
Sbjct: 204 VGISLNQIWAIVWFAAGLVALATGIMWGARS---DVSFALEIVAFKALPVLILGGFTSIP 260

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
                      ++             L           + L  I   + +L R   L   
Sbjct: 261 ---------GAIIGGLIIGFGEKIGELYWGGLVGGGIESWLAYIIALIFLLFRPQGLFGE 311

Query: 343 R 343
           +
Sbjct: 312 K 312


>gi|237737855|ref|ZP_04568336.1| galactoside transport system permease mglC [Fusobacterium
           mortiferum ATCC 9817]
 gi|229419735|gb|EEO34782.1| galactoside transport system permease mglC [Fusobacterium
           mortiferum ATCC 9817]
          Length = 339

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/296 (8%), Positives = 79/296 (26%), Gaps = 12/296 (4%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYV--ILGSRY 88
            +  S +   ++  Q  + ++ A G++ ++ + G   L+        A      +  +  
Sbjct: 37  PSFLSIRNFKNILTQSSVRLIIALGVAGLIVTTG-TDLSVGRQVGFSAVISATLLQAATT 95

Query: 89  GLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKA 148
              ++  +    +      +++    +            +   I     +      N   
Sbjct: 96  AHKVYPDMQDFPLFGAIAIVMLVGMIIGALNGLAVAKLNLHPFIVTMGSMTIVYGINSLY 155

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
             +             +                 ++Y L+    +         +T    
Sbjct: 156 YDFAGGSPIAGFAEKYTSFAQGYINIGGFTISYLIFYALIATVIMWIL----WNKTKFGK 211

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               +  N +A       + +  +  +A+S  F    G   A      + ++    E   
Sbjct: 212 NVFAVGGNIEAAKVSGVNVHWTLIKLYALSGIFYAFGGFLEAGRIGSATNNLGNMYEMDA 271

Query: 269 VISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           + + VI      GG+  +S +     +L  +      +    +   +       + 
Sbjct: 272 IAACVIGGVSFYGGVGKISGVVTGVILLTVINYGLTYIGVNPYWQYIIKGLIIIVA 327


>gi|187921267|ref|YP_001890299.1| monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
 gi|187719705|gb|ACD20928.1| Monosaccharide-transporting ATPase [Burkholderia phytofirmans PsJN]
          Length = 399

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 45/359 (12%), Positives = 94/359 (26%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   +L  +A ++     L  GA  + + + ++  Q+ I  M A G+  V+   G + L+
Sbjct: 33  KILALLIAVAAIWIFFSALTHGAFVTPRNLSNLLRQMSITGMLACGMVFVI-IAGEIDLS 91

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 +      IL       I + +PV  ++    GM  G  S   R     +    M
Sbjct: 92  VGSLLGLLGGVAAILDVNRHWPIGVTLPVVMLLGVLVGMFNGWWSTYRRVPSFIVGLGGM 151

Query: 130 SEIFQNIL-----------------------------------------IKWKPITNGKA 148
                 +L                                         +  +   N + 
Sbjct: 152 LAYRGILLGVTGGSTIAPVSDSFVFVGQGYLPRLAGDTLAVVLFLLLAFLTIRQRRNRER 211

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                  ++     V           + +     +   +L +  L         +T    
Sbjct: 212 YQLRVVPVWQDVVKVVGAGVILAGFVATLDRYGGIPVPVLLLLALLGIFTWIATQTVFGR 271

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               +  N +A           KL+ FA+        G    A     SP      E   
Sbjct: 272 RIYAVGSNLEATRLSGVNTNRVKLAIFALMGLMCAFGGIVNTARLAAGSPSAGSMGELDA 331

Query: 269 VISIVILG-----GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + +  I G     G  ++        ++  +      ++   +  ++       +    
Sbjct: 332 IAACFIGGTSMRGGSGTVYGALIGALVMASLDNGMSMLDVDAYWQMIVKGSILVLAVWI 390


>gi|325262349|ref|ZP_08129086.1| ABC transporter, membrane spanning protein [Clostridium sp. D5]
 gi|324032181|gb|EGB93459.1| ABC transporter, membrane spanning protein [Clostridium sp. D5]
          Length = 332

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/314 (12%), Positives = 109/314 (34%), Gaps = 15/314 (4%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           I+  + +   +L+ +   A  S   + S+   +L+ ++FA    ++V   G + ++    
Sbjct: 15  IVVYIILALCILIGIVNPAFASASTVVSLLRSMLVTLIFA-AFEMMVIISGGIDVSFPAV 73

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            +   Y+  ++ +  GL+  +L  + A++ G     +    +   G    IATL +S + 
Sbjct: 74  ASFAMYATAMIMNGAGLNSIVLAFIIAIVIGMLFGFLNSVLVARLGIPPLIATLGVSSVA 133

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
               + +             +      +       F             +  ++L    +
Sbjct: 134 NGATLAFLGSK---------EINKLPESFGNLSKVFIYEYVGESGITYQLTALILIPVVI 184

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
              + + L+ T +      +  ++ A       ++F +   + ++ A  G+ G  +    
Sbjct: 185 YIGLWILLKYTMLGRGIYAVGGDKNAARIAGFRVVFIQSFVYILAGALAGVGGVTYMILM 244

Query: 254 DRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            +  P +   +E +++ ++V     I GG  S+S       ++  +      +    +  
Sbjct: 245 RQAHPQVLMGTEMMVIAAVVMGGTRITGGHGSISGTILGVTLIALIQNNLIMLGVPTYAQ 304

Query: 309 LLKFDCSFNMRHTT 322
                    +  + 
Sbjct: 305 TFVVGLLIVVGTSI 318


>gi|319782744|ref|YP_004142220.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168632|gb|ADV12170.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 332

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/316 (11%), Positives = 92/316 (29%), Gaps = 23/316 (7%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
              + +  ++  + L     A  + K + ++   I    + A G++ V+   G + L+  
Sbjct: 25  TFWVVIAVILACVFLSFATDAFATSKNLYNITRNITFVAIIALGMTFVI-ITGGIDLSVG 83

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               + +    +           ++   A                          LI   
Sbjct: 84  SVLCLSSMVLAVTMHAGYSIEVGILASIATALAIGAF---------------NGVLIAYL 128

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
            F   ++    ++  ++   VA     +        +         ++ I    + + + 
Sbjct: 129 GFPPFVVTLGMLSIARSLAMVASNNTVVFQFGPDHAKLLSLGGGAWVFGIANPVLYMILL 188

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
            L    IL    T        I  N+ A       +   K++ + +S+   G+AG     
Sbjct: 189 ALITGFILRW--TKFGRHIFAIGGNEHAATLTGVPVRQIKVAVYMISALSAGIAGIIQTG 246

Query: 252 SRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
               ++ ++    E  ++ + VI      GG+ +        A++  +      +    F
Sbjct: 247 WLGAVTTNLGTGMELQVIAATVIGGANLAGGVGTAFGAIVGAALIEVIRNSLGLLGINAF 306

Query: 307 NSLLKFDCSFNMRHTT 322
              +    +  +    
Sbjct: 307 WQGVFIGGAILLAVLF 322


>gi|315651474|ref|ZP_07904497.1| simple sugar ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
 gi|315486294|gb|EFU76653.1| simple sugar ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
          Length = 351

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 85/272 (31%), Gaps = 20/272 (7%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAI-GAYSYVILGSRYGLSIWLLI 96
           YI  +  +    V+ A G+++VV S G   ++     A+ GA +  IL      +     
Sbjct: 48  YIIDVINRASELVILAVGMTLVVASSGGTDISVGAVCALAGAVACFILAGGQVSTDIYRA 107

Query: 97  PVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRL 156
           P       A  + +           L  +         NI      +    AG  +A  +
Sbjct: 108 PYIIAFLAAILVGL-----------LCGSFNAFLVAKMNIQPMVATLILFTAGRGMAQLV 156

Query: 157 YFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDN 216
                T   +  F    +S     +     +         +IL  ++TA+     T+  N
Sbjct: 157 TNGQITYIRVDSFKMLGNSIKGIPLPTPVFVAIAVVAVTFVIL--KKTALGLYIETVGIN 214

Query: 217 QKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL- 275
            KA   +    +  +  A+A      G++G   ++       +    +  +  I  V L 
Sbjct: 215 NKAARLVGLNPVLIQFIAYAFCGLLAGLSGMLVSSRVYSADANNAGLNIELDAILAVALG 274

Query: 276 -----GGMTSLSKIAKATAILIGVVELCCGMN 302
                GG  SL         +  +      M+
Sbjct: 275 GNSLGGGRFSLLGSVIGAYTIQALTTTLYAMS 306


>gi|218462113|ref|ZP_03502204.1| sugar ABC transporter, permease protein [Rhizobium etli Kim 5]
          Length = 196

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 47/163 (28%), Gaps = 5/163 (3%)

Query: 162 TVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFF 221
            V +      F +      + +  +      + A + + LR +    +      N  A  
Sbjct: 4   WVNAHQMTPTFLAVPRTPILGLPVLSWVAIIIVALMYMLLRYSQFGRSAYATGGNPTAAV 63

Query: 222 SLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV-----ILG 276
                    K  AF +S A  G+A   + +       D+    E   V + V     I G
Sbjct: 64  YAGIDTGRTKFLAFVLSGALAGLASYLWVSRYAVAYVDIANGFELDSVAACVIGGISIAG 123

Query: 277 GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
           G+ S++        L  +      +    F  +        + 
Sbjct: 124 GVGSVAGTVLGALFLGVIKNALPVIGISPFTQMAISGTVIILA 166


>gi|115379171|ref|ZP_01466291.1| ribose transport system permease protein RbsC [Stigmatella
           aurantiaca DW4/3-1]
 gi|310821667|ref|YP_003954025.1| inner-membrane translocator [Stigmatella aurantiaca DW4/3-1]
 gi|115363817|gb|EAU62932.1| ribose transport system permease protein RbsC [Stigmatella
           aurantiaca DW4/3-1]
 gi|309394739|gb|ADO72198.1| Inner-membrane translocator [Stigmatella aurantiaca DW4/3-1]
          Length = 326

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 97/306 (31%), Gaps = 33/306 (10%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQK------YIDSMGIQILIYVMFAWGLSIV 59
           +R   +  ++ L A++   LLF    A    +       +  +       ++ A G+++V
Sbjct: 1   MRPRNFWPLVALAALLVFNLLFTTGFARVEFRDGRLFGTLVDIFQNGAPVMLLAVGMTLV 60

Query: 60  VGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
           +   G + L+     A+      +L + +G S+ + I  +  ++   G+I G        
Sbjct: 61  IALGG-IDLSVGSVMALSGAVAALLMTEHGQSVPMGILAALGVALLVGVINGALVSYGSI 119

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
             + +  + +                             L    +       F       
Sbjct: 120 QPIIVTLVTLVMG--------------------RGLAQTLTQDQKVRFEIPAFEFIGNGT 159

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
            + + + +L +  ++  + L LRRTA       +  N +A       +   +L A+   +
Sbjct: 160 VLGLPFPVLLVAAVALGVSLLLRRTATGLYIEAMGGNPQAARLCGLRVHVIRLMAYMACA 219

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIG 293
              GMAG   AA               +  I  V+L      GG  +L         +  
Sbjct: 220 LCAGMAGLIAAADIKEADVANAGLYLELDAILAVVLGGTSLSGGRANLVGSLIGAIFIQT 279

Query: 294 VVELCC 299
           +  +  
Sbjct: 280 LTIMLQ 285


>gi|148262199|ref|YP_001228905.1| inner-membrane translocator [Geobacter uraniireducens Rf4]
 gi|146395699|gb|ABQ24332.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Geobacter uraniireducens Rf4]
          Length = 294

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 90/309 (29%), Gaps = 19/309 (6%)

Query: 34  KSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIW 93
              + +    +   IY+  A   S+  G + ++          GA++   L    GL  +
Sbjct: 3   LLPQALADGILLGGIYITIAIAFSLTYGVMHVIDFAVGEWIMFGAFTGFYLNKWTGLDPF 62

Query: 94  LLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVA 153
           + +PV  ++    G ++     +          L+       + I ++ I     G Y +
Sbjct: 63  IFLPVIFIMYFVIGYLVQPVIHRVLSGTKGNPFLMGLVFTFGLAIMFRGIALTVFGFYSS 122

Query: 154 DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTI 213
                      +   +    +   +  + + Y LL    L   +    ++T      R +
Sbjct: 123 SIPSMFSEGSFTFDNYGISVTIPTVRLVGLVYALLITAALHFLL----KKTNFGLGVRAL 178

Query: 214 RDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIV 273
             +++A   +           + +      M G                    I    +V
Sbjct: 179 AQHKEAAGLMGVNSKRTGSYVYGIYVGISAMTGVLLGCILSI--GAQMGNEYTIFAFFVV 236

Query: 274 ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVIL 333
           +L GM  L+ +  A  +L  V  +                          +   L++++L
Sbjct: 237 VLAGMGYLAGVPWAAMLLGMVQSIFMIYFN-------------PSHTLLAVFAILYVILL 283

Query: 334 MRSHSLLRL 342
           +    L   
Sbjct: 284 ISPRGLFGR 292


>gi|331651247|ref|ZP_08352272.1| putative branched-chain amino acid transport system, permease
           component [Escherichia coli M718]
 gi|331050988|gb|EGI23040.1| putative branched-chain amino acid transport system, permease
           component [Escherichia coli M718]
          Length = 323

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 101/315 (32%), Gaps = 18/315 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +++  L LL VV  + L        +   +  +     +  + A GL  VV   G + ++
Sbjct: 7   RHEFWLALLIVVLFVGLAWRSDEFLTFGNLYDLANNYAMLTILACGL-FVVLISGGIDIS 65

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 I  Y  V+L  + G +  +   ++  I    G+I  L   + R   + I     
Sbjct: 66  FPAMTIIAQYGMVLLLQKIGGNFAVAFALAGCIGILLGLINALLVNRLRVPSIIIT---- 121

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                   I    I  G           +               +    Y+  +   L+ 
Sbjct: 122 --------ISTLNIFYGLLLWLSKGVWLYDFPPWFEQGVMLFKYTDADGYDYGLGLPLIA 173

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           M  +       ++ T++      +  N+++   +  +++  +L  +       G AG   
Sbjct: 174 MITVVLLTAFIMKFTSVGRKIYALGGNRESASRIGFSVLKLQLFVYGYMGLMSGAAGVVQ 233

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           + +   ++PD     E  ++ ++V     +LGG  +L+       +L  +      +   
Sbjct: 234 SWTVMTVAPDSLLGYELTVLAAVVLGGTSLLGGRGTLTGTLLGVVLLAVMQNGLNLLGVS 293

Query: 305 YFNSLLKFDCSFNMR 319
            +   L         
Sbjct: 294 SYWQTLITGIIIVAS 308


>gi|229196177|ref|ZP_04322927.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus m1293]
 gi|228587335|gb|EEK45403.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus m1293]
          Length = 286

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 103/305 (33%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V L +  G  +  LI  
Sbjct: 8   FVNGISTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWLFNMTGSYVLALIGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 68  IAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKVFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L     F    VI   +  +V++    +  +++L L++T I    R    +++
Sbjct: 116 PIGAKLPLWLQGSFTFGGVILIKYRLFVIIIGVIIYIALLLLLKKTKIGLMIRAGVMDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++ + 
Sbjct: 235 GSVQGSAIASLIVGLAGVFTAYF--------------IPDLSLAINMLMLLFFLIVKPNG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|218698768|ref|YP_002406397.1| sugar ABC transporter permease [Escherichia coli IAI39]
 gi|218368754|emb|CAR16498.1| putative permease component of sugar ABC transport system
           [Escherichia coli IAI39]
          Length = 328

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 100/315 (31%), Gaps = 18/315 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +++  L LL VV  + L        +   +  +     +  + A GL  VV   G + ++
Sbjct: 12  RHEFWLALLIVVLFVGLAWRSDEFLTFGNLYDLANNYAMLTILACGL-FVVLISGGIDIS 70

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 I  Y  V+L  + G +  +   ++  I    G+I  L   + R   + I     
Sbjct: 71  FPAMTIIAQYGMVLLLQKIGGNFAVAFALAGGIGILLGLINALLVNRLRVPSIIIT---- 126

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                   I    I  G           +               +    Y+  +   L+ 
Sbjct: 127 --------ISTLNIFYGLLLWLSKGVWLYDFPPWFEQGVMLFKYTDADGYDYGLGLPLIA 178

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           M  +       +  T++      +  N+++   +  +++  +L  +       G AG   
Sbjct: 179 MITVVLLTAFIMNFTSVGRKIYALGGNRESASRIGFSVLKLQLFVYGYMGLMSGAAGVVQ 238

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           + +   ++PD     E  ++ ++V     +LGG  +L+       +L  +      +   
Sbjct: 239 SWTVMTVAPDSLLGYELTVLAAVVLGGTSLLGGRGTLTGTLLGVVLLAVMQNGLNLLGVS 298

Query: 305 YFNSLLKFDCSFNMR 319
            +   L         
Sbjct: 299 SYWQTLITGIIIVAS 313


>gi|187927073|ref|YP_001893418.1| inner-membrane translocator [Ralstonia pickettii 12J]
 gi|241665402|ref|YP_002983761.1| inner-membrane translocator [Ralstonia pickettii 12D]
 gi|187728827|gb|ACD29991.1| inner-membrane translocator [Ralstonia pickettii 12J]
 gi|240867429|gb|ACS65089.1| inner-membrane translocator [Ralstonia pickettii 12D]
          Length = 285

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 109/304 (35%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +     ++Y + A GLSI+ G L  ++      YA+GAY       + G++ WL + +
Sbjct: 8   VVNGVGIGMLYFLLAVGLSIIFGLLRFVNFAHGAFYALGAYLC-FQALQMGMNFWLALVL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + ++ GA   +     L+          ++++     ++ +   +  G  G+ V      
Sbjct: 67  APIVIGALAWVTEKVLLRHVYAQAHEFHIVVTVGLALVVQELIIVAWGPLGVDVPAPDAL 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  +              +Y  +  +V+     L+  +   L  T + +A R   ++ +
Sbjct: 127 QGVVMWGDF----------VYPKYRLFVIGFTAVLALGLWWLLEGTRLGSAVRAGSESTE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       FA+ +A   +AG   A  R        +      V+ +V    M
Sbjct: 177 MVSLLGINVFRLFSLMFALGAATAAVAGVLAAPIRGAEPFMGVEALGVAFVVVVVGG--M 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S +       ++  V  L   +              +      ++ +A+  V+L+R H 
Sbjct: 235 GSFAGALVGGLLVGIVQSLMSTL--------------WPEGARLMIYVAMAAVLLLRPHG 280

Query: 339 LLRL 342
           LL  
Sbjct: 281 LLGR 284


>gi|326329253|ref|ZP_08195579.1| branched-chain amino acid ABC transporter, permease protein
           [Nocardioidaceae bacterium Broad-1]
 gi|325952988|gb|EGD45002.1| branched-chain amino acid ABC transporter, permease protein
           [Nocardioidaceae bacterium Broad-1]
          Length = 288

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 88/303 (29%), Gaps = 26/303 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +    Y + A GLS++ G + +++L   +     AY  + L  + G+  +L I +
Sbjct: 7   VLQGLLLGGQYALLACGLSLIFGVMRIVNLAHGVLAVAAAYLALWLVQQTGMPSFLTIVI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
              +  A G  +          +  ++ L++S     I                      
Sbjct: 67  VIPVLAAVGYAIQRGLFNAALRHGELSPLLVSFGLAVIGANLLQEIFTAD---------- 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                   +         +   +F    L+    +   + L+L  T I  A R  +D+ +
Sbjct: 117 SRKISIGTLSTSSVELGQLRLGVFSLLTLVVAVGVIVGLQLYLSHTRIGRAMRATKDDPE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A   +          A A++   + +AG F   S        +     I     VI+   
Sbjct: 177 AATLMGIDERHMYALATAIAIGTVALAGVFLGMSTQF--SPTYGDLVLIFAFEAVII--- 231

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
                        +G +            +                 +   +V+L R   
Sbjct: 232 -----------GGLGSLWGTLLGGLVLGVAQTVGAQIDPAYGVLAGHLVFLVVLLFRPQG 280

Query: 339 LLR 341
           LL 
Sbjct: 281 LLP 283


>gi|303253776|ref|ZP_07339911.1| beta-methylgalactoside transporter inner membrane component
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|307246341|ref|ZP_07528419.1| Galactoside transport system permease protein mglC [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307248468|ref|ZP_07530488.1| Galactoside transport system permease protein mglC [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307250686|ref|ZP_07532623.1| Galactoside transport system permease protein mglC [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307255327|ref|ZP_07537139.1| Galactoside transport system permease protein mglC [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259777|ref|ZP_07541497.1| Galactoside transport system permease protein mglC [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|302647360|gb|EFL77581.1| beta-methylgalactoside transporter inner membrane component
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|306852751|gb|EFM84978.1| Galactoside transport system permease protein mglC [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306855036|gb|EFM87219.1| Galactoside transport system permease protein mglC [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306857294|gb|EFM89413.1| Galactoside transport system permease protein mglC [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306861714|gb|EFM93696.1| Galactoside transport system permease protein mglC [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866167|gb|EFM98035.1| Galactoside transport system permease protein mglC [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 336

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/297 (9%), Positives = 83/297 (27%), Gaps = 8/297 (2%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            +  S +   ++  Q  + ++ A G++ ++ + G   L+      + A     L      
Sbjct: 34  PSFLSLRNFSNILSQSSVRLIIALGVAGLIVTQG-TDLSAGRQVGLAAVITATLMQSMEN 92

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              +   ++ +      + +             +   +    F   +     +    +  
Sbjct: 93  MNRVFPNLAEIPIPVVILAVCAIGAVIGLLNGFVIAYLNVTPFIATMGTMIIVYGINSLY 152

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
           Y A     +     S   F +    F  +++    +   +  L   ++    +T      
Sbjct: 153 YDAVGGSPIAGFSDSFSTFAQGFFRFGDFKLSYITIYAIIATLIMWVLWN--KTRFGKNI 210

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N +A       +    +  + +S  F    G   A      + ++    E   + 
Sbjct: 211 FAIGGNPEAARVSGVNVPLNLMGIYMLSGVFYAFGGMLEAGRIGSATNNLGFMYEMDAIA 270

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + V+      GG+ ++  +     I   +      +    +   +       +    
Sbjct: 271 ACVVGGVSFAGGVGTIIGVVTGVIIFTVINYGLTYIGVNPYWQYIIKGGIIVLAVAI 327


>gi|256380832|ref|YP_003104492.1| Monosaccharide-transporting ATPase [Actinosynnema mirum DSM 43827]
 gi|255925135|gb|ACU40646.1| Monosaccharide-transporting ATPase [Actinosynnema mirum DSM 43827]
          Length = 346

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 99/320 (30%), Gaps = 13/320 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           + + +    L A++      L      S   + +         + A  +++++   G   
Sbjct: 22  VRRPEVGALLGALLVFAFFSLATERFLSPAGVATWLDDASTLGIAAVAVALLM-IGGEFD 80

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +  A  A    +L +R G + WL + VS + + A G + G   ++       +   
Sbjct: 81  LSAGVMTASTALVTAVLATRLGWNTWLALLVSLVFALAVGALNGWLVVRTGLPSFIVTLG 140

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
               +    L   + +T           +  + +        + F S+  +        +
Sbjct: 141 AFLALQGLNLGVTRLVTGTVQ-------VSGMRSADGYASAGYFFASTIDVGGTAFRVSI 193

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L    ++A   + L RT   N    +  N  A  ++   +   K+  F  ++A   + G+
Sbjct: 194 LWWLGVTALAAVVLLRTRFGNWVFAVGGNATAARAVGVPVRRTKILLFMTTAAAAWLVGS 253

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
                   +  +     E   +I+ VI      GG  S    A    I     +     N
Sbjct: 254 INILRFTSVQANQGIGLEFQFIIAAVIGGCLLTGGFGSAIGAAIGALIFGMARQGIVYAN 313

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
           +      L            
Sbjct: 314 WNSDWFQLFLGAMLLAAVLV 333


>gi|49185770|ref|YP_029022.1| ribose ABC transporter permease [Bacillus anthracis str. Sterne]
 gi|167637681|ref|ZP_02395960.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0193]
 gi|170704835|ref|ZP_02895301.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0389]
 gi|177649212|ref|ZP_02932214.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0174]
 gi|229602959|ref|YP_002867218.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0248]
 gi|49179697|gb|AAT55073.1| ribose ABC transporter, permease protein, putative [Bacillus
           anthracis str. Sterne]
 gi|167514230|gb|EDR89597.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0193]
 gi|170130636|gb|EDS99497.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0389]
 gi|172084286|gb|EDT69344.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0174]
 gi|229267367|gb|ACQ49004.1| putative ribose ABC transporter, permease protein [Bacillus
           anthracis str. A0248]
          Length = 338

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 45/331 (13%), Positives = 102/331 (30%), Gaps = 33/331 (9%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +++ +L +L ++  +L  L      +   +       L   + A  ++ V+   G + ++
Sbjct: 15  RWEGVLIVLLLIEFILFSLINSDFLNISNLLFSTNDFLFIAIAAIPMTFVI-VTGGIDVS 73

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 + +    +L       ++ +I    +   A  +   +  +      +     + 
Sbjct: 74  VGSIMGLTSILIGVLWMNGISILFAVIISLIISCLAGALNGFIIKMTDVEPLVVTLGTMF 133

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                 ++I      +G  GI                     F        I +  +L  
Sbjct: 134 LYGGIALVISGGAGASGYEGISGLP---------------DAFVQLASGSFIGIPNLLWL 178

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           +  L+    +   RT      +    N+ A            + A+ +S    G+ G F 
Sbjct: 179 LIVLTVLCAVLFHRTIYGRHVKLTGANENAAKYTGIMTKKVVIIAYMLSGLGGGLGGTFL 238

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            A       DM   +   I+ ++V     I GG  S+     A+  +  +          
Sbjct: 239 TAYFGSARADMGSETILPIITAVVLGGTLITGGKGSIIGTVLASIFIGLMQ--------- 289

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALFLVILMR 335
                L+     N +   ++ I L L ++MR
Sbjct: 290 ---YGLQMTGLTNEQSNVVIGIILILSVIMR 317


>gi|328884603|emb|CCA57842.1| sugar ABC transporter integral membrane protein [Streptomyces
           venezuelae ATCC 10712]
          Length = 420

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 53/307 (17%), Positives = 98/307 (31%), Gaps = 19/307 (6%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFA-WGLSIVVGS----L 63
            K      +L V   LLLF  + A      + S+G       +    GL+ + G      
Sbjct: 19  RKLTLPWIMLIVAAGLLLFSLVRAVSGANDLTSVGQVSGALQLAVPIGLAGLGGLWAERA 78

Query: 64  GLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA 123
           G++++       +G +     G ++G  + +L  +     G     +   +         
Sbjct: 79  GVVNIGLEGMMVLGTWFGAWAGYQWGPWVGVLFGLLGGALGGLLHAIITVTFNVNHIVSG 138

Query: 124 IATLIMSEIFQNILIKWKPI--TNGKAGIYV---------ADRLYFLGTTVRSLIRFFRF 172
           +A  I++  F   L  +       G +                L    + +++   FF  
Sbjct: 139 VAINILAVGFTQYLSNFTFAEADGGSSKQSPRIDQITKVTIPGLSDWLSDLQAKHWFFVS 198

Query: 173 PSSFVIYEIFMYYVLLGMCFLSAS--IILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFA 230
             + ++  +     LL +  +         L RTA     R+  +N  A  SL   +   
Sbjct: 199 DLAGILGGLVTNLSLLTIVAVLLIPATWWVLWRTAFGLRLRSCGENPVAAESLGVNVYKY 258

Query: 231 KLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAI 290
           K  A   S A  G+ GAF A     I  +        I ++ +I G       +A    +
Sbjct: 259 KYIAVTTSGALAGLGGAFLAIVATGIYQEGQTGGRGYIGLAAMIFGNWM-PGGMALGAGL 317

Query: 291 LIGVVEL 297
                 L
Sbjct: 318 FGFTDSL 324


>gi|239625243|ref|ZP_04668274.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239519473|gb|EEQ59339.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47FAA]
          Length = 320

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 104/318 (32%), Gaps = 28/318 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLF-LFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           ++ Y K +CL+++V    +F + +        + +M I+    ++ A GLS V+   G +
Sbjct: 10  ISDYSKYMCLISIVLVFGIFSIVIPNFIGAYSLQNMMIEAAPLLLMAGGLSFVI-YTGGI 68

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L      +       I  +R+G    ++IP+  ++  A G++ GL   K +     +  
Sbjct: 69  DLGAGPMVSCTCVLTGIYVARFGN---VIIPIMLVVGLAMGLLNGLLVTKLKLPSFIVT- 124

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
                +       +  +T    G  +            +                 +  V
Sbjct: 125 -----LCTTNFWSYIALTLCPNGSEIIPMDKRFMVKWATQK------------VAGIPVV 167

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
            L        + ++ + T    +   +  N  A          A++SAF +S A   +AG
Sbjct: 168 FLIALLGIVLLFIFQQYTVYGKSIYAVGANVSAARLAGVDTDKAQISAFVMSGACSALAG 227

Query: 247 AFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGM 301
           AF+A       P +        + S+      + GG  S+ +       + GV      M
Sbjct: 228 AFYAYKLKSAVPTVGDALTLTAIASVALGGTSMAGGRGSVLRTLIGVVTITGVTSGLNMM 287

Query: 302 NFYYFNSLLKFDCSFNMR 319
                   +         
Sbjct: 288 GVDPLWKNIVIGIILIAA 305


>gi|126459066|ref|YP_001055344.1| inner-membrane translocator [Pyrobaculum calidifontis JCM 11548]
 gi|126248787|gb|ABO07878.1| inner-membrane translocator [Pyrobaculum calidifontis JCM 11548]
          Length = 311

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 88/311 (28%), Gaps = 10/311 (3%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
                 +    I   IY +   GL++   +  + S        +GAY             
Sbjct: 4   FIDYPTLARAIIFSNIYALLGLGLNLTYITTKIPSFAHGDLATVGAYVSYFTIVFLLGGA 63

Query: 93  WLLIPVS-AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIY 151
              + +S  ++    G +     +      +     I + +  +  + +   +       
Sbjct: 64  AASVYLSLPLVVLMSGAVAVATYIAVFRPMIRRGASITALMIASFGVHFVLFSAVAIAAD 123

Query: 152 VADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWR 211
                Y + T    L  +             +    L +  +SA +   L RT      R
Sbjct: 124 YVQNTYKVLTRNVLLANYEFVWPGTDFLTSSLINTSLAVAAVSALLYFILYRTRYGVVMR 183

Query: 212 TIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVIS 271
              DN     ++   +      A+ +  A  G+AG + A        +   +    +V  
Sbjct: 184 ASIDNIYLAKAVGINVEAVFAIAWFLIGAVTGLAGVYMAMFFPM--TEELGWLRLALVFV 241

Query: 272 IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
             ++GG++++          +    +           +L            +    + ++
Sbjct: 242 ASVVGGLSNI-------FGGLLGGYVVGLSTVLGAAYILAPLNVPIEFQLIIPFSIVIVI 294

Query: 332 ILMRSHSLLRL 342
           +L     L+ L
Sbjct: 295 LLFMPQGLVSL 305


>gi|326329847|ref|ZP_08196167.1| xylose transport system permease protein XylH [Nocardioidaceae
           bacterium Broad-1]
 gi|325952433|gb|EGD44453.1| xylose transport system permease protein XylH [Nocardioidaceae
           bacterium Broad-1]
          Length = 424

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 46/142 (32%), Gaps = 6/142 (4%)

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           LL +  L   +   L RTA       +  N +A       +   +LS F + S    MAG
Sbjct: 269 LLVIVGLLIVLTFMLTRTAWGRHVYAVGGNAEAARRAGINVFRVRLSCFILCSTMAAMAG 328

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCG 300
              A+  + ++P+    +  +  +   ++GG         +        ++  +      
Sbjct: 329 IMIASRTNSVNPNTGGETTLLYAVGAAVIGGTSLFGGKGRVIDAVIGGTVVAVIDNGMGL 388

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           ++       +       +  + 
Sbjct: 389 LDQPQGTVWMVTGLVLLVAASV 410


>gi|295680711|ref|YP_003609285.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
 gi|295440606|gb|ADG19774.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 331

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/315 (10%), Positives = 86/315 (27%), Gaps = 24/315 (7%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
             + L  +V  + L +      + + + ++        + A G+  V+   G + ++   
Sbjct: 26  FWVVLATIVACIALSIATSTFATSENLFNVTRNFAFVAIVALGMMAVI-VTGGIDISVGS 84

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
              I      ++ +     IW  I +  + +G  G++ GL           +   ++   
Sbjct: 85  TIGISGIVLSVVMNAGYP-IWAGIGMGLLTAGLVGLVNGLLIAYLGMQPFVVTLAML--- 140

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
                           G  +A  +    T         +  +      + +   +  +  
Sbjct: 141 --------------SVGRSLALVISRSRTIFDFGPDGSKLLTLGGGATLGVANPVWFLIL 186

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L          T        I  N+ A       +     S + +     G+A       
Sbjct: 187 LGLLFWFAFGWTRWGRYVFAIGGNRHAATLTGVPVRRIVCSVYVLCGLMAGVAAILEVGW 246

Query: 253 RDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
              ++  +    E  ++ + V+     +GG+ S        A++  +      +    F 
Sbjct: 247 LGAVTTGLGTGDELRVIAATVVGGTNLIGGVGSAFGTIVGAALIEVIRNSLILLGVDAFW 306

Query: 308 SLLKFDCSFNMRHTT 322
                     +    
Sbjct: 307 QGTVVGSFIVVAVLF 321


>gi|239927958|ref|ZP_04684911.1| ABC transporter sugar permease [Streptomyces ghanaensis ATCC 14672]
          Length = 372

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 40/326 (12%), Positives = 96/326 (29%), Gaps = 15/326 (4%)

Query: 4   FSLR--LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVG 61
           F LR  L++ +    + A+       L          + ++        + A  +++++ 
Sbjct: 43  FPLRRLLSRPELGSVVGAIAVFCCFALVADGFLRASSLGTVLYASSTIGIMAVPVALLM- 101

Query: 62  SLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDY 121
             G   L+  +     A    +   +   ++W+ + VS +++ A G   G+   + R   
Sbjct: 102 IGGEFDLSAGVLVTSSALLSSMFSYQMTANVWVGVGVSLLVTLAIGAFNGIMLARTRLPS 161

Query: 122 LAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEI 181
               TL    +   + + +  + +G         +             F      +   +
Sbjct: 162 FI-VTLGTFLMLTGMNLGFTKLVSGTVSTRTIADMEGFAGARALFASTFTVGGVHLKVTV 220

Query: 182 FMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAF 241
             +  L+ +            RT   N    +  N++A  ++   +   K   +   +  
Sbjct: 221 VWWLALVALGSWILL------RTRAGNWIFAVGGNERAARAVGVPVARTKTGLYMGVALG 274

Query: 242 IGMAGAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVE 296
             + G     S D +       +E I +I+ V     I GG  S    A    +     +
Sbjct: 275 AWICGQHLLFSYDVVQSGEGVGNELIYIIAAVIGGCLITGGHGSAVGSAVGALLFGMTSK 334

Query: 297 LCCGMNFYYFNSLLKFDCSFNMRHTT 322
                 +              +    
Sbjct: 335 GIVFAEWNPDWFKFFLGAMLLLATLL 360


>gi|269793036|ref|YP_003317940.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100671|gb|ACZ19658.1| inner-membrane translocator [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 290

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 84/305 (27%), Gaps = 25/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           + +      +Y + A G S+V   L   +        +GAY  + L  R  L + L++ +
Sbjct: 6   LITGLSVGGVYALMALGYSLVFSVLNFSNFAHGAVIMLGAYMGLGLAMRLNLGLGLVVAL 65

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           SA+ +G  G++    +        + +  +M       ++    +            +  
Sbjct: 66  SAVGAGVIGILNEKLAYSAIRRKGSPSLYLMISAMGCAVLLENLVY---------ATIGS 116

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
              +                  +   +           + L+L R+    A R    +  
Sbjct: 117 RFYSFPEFFPRTSVHLLGASISLMDLWAFGFSLLAIWGLNLFLTRSRTGMAIRAAVQDMT 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               +   +       F ++  F G++G F            +            ++GG+
Sbjct: 177 MCAVMGVNVDRLISVVFFLAGLFGGISGVFLGIKYLVYPTMGW---VTNKAYIAAVIGGL 233

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            SL        +L  +              +  F     +                R + 
Sbjct: 234 GSLPGALVGGILLGLLETFVSTYVSSVMRDVFSFGLLVVLLLV-------------RPNG 280

Query: 339 LLRLR 343
           L+  R
Sbjct: 281 LMGRR 285


>gi|239624062|ref|ZP_04667093.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239522093|gb|EEQ61959.1| ribose transport system permease protein rbsC [Clostridiales
           bacterium 1_7_47FAA]
          Length = 329

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 89/320 (27%), Gaps = 26/320 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           LNK +    L   +  +++        +   I  +        + A  ++ ++ S G+  
Sbjct: 20  LNKNELGTILPLCLLLIVVGCVNPNFFAMNNILDILKTSSFSFIVAVPITFLMASGGM-D 78

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+   A + G                      +++       +          Y  +   
Sbjct: 79  LSIGAATSFGGVVCAFALKAGMPIPV------SIVLALGAGAVVGVINGIVIVYFDLPPF 132

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I +   Q              GI          +   S  +       F +  + + Y L
Sbjct: 133 IATLGTQYAF----------NGIIAITTENLAISGFSSSFKMIGQNKLFGMVPLPVVYAL 182

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +        ++    +T    A   I  N++  +     +    L+ F  +S    ++G 
Sbjct: 183 IIGIIGHIILV----KTKYGRAILAIGGNRETAYLAGINVRAKCLTVFIATSMLAALSGV 238

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
             A+      P     +E  I+ S++I      GG  ++   A    +L  +      M 
Sbjct: 239 LMASRFASAQPAAGTGTELTIMASVIIGGTSMFGGTGTVLGSALGCILLATITNALIVMK 298

Query: 303 FYYFNSLLKFDCSFNMRHTT 322
              F   L F          
Sbjct: 299 VSTFWQNLIFGVILLAAIFI 318


>gi|126731152|ref|ZP_01746960.1| probable sugar ABC transporter, permease protein [Sagittula
           stellata E-37]
 gi|126708454|gb|EBA07512.1| probable sugar ABC transporter, permease protein [Sagittula
           stellata E-37]
          Length = 349

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/321 (12%), Positives = 96/321 (29%), Gaps = 25/321 (7%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
             + +  +   L++     A  +++ + ++   +  + + A G+S V+ + G + L+   
Sbjct: 45  FWVFVAILFIALVMSFVSDAFMTERNMFNITRNMAYFGIMALGMSAVICTAG-IDLSVGS 103

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
              +   +  +   + G  + +      + +   G I G+     R     +   ++   
Sbjct: 104 LLGLCGINLAL-VLQAGWGVEVGFIACMLTAAIVGFINGVLIAYVRLAPFVVTLGML--- 159

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
                              VA  +               F        + +  V+  +  
Sbjct: 160 --------------AMARSVAMVVSNNKMIYEFGPDQEIFEWIGGGDVLGVPNVVWVLII 205

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           ++   +   R T        I  N  A       +    +S + V S   G+A   F   
Sbjct: 206 MTLLFLWVWRFTQWGRWVIAIGGNAHAAKLAGIPVERVIVSVYMVCSMCTGIAAFMFIGY 265

Query: 253 RDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKF 312
               +  M   +  + VI+  ++GG            +      +   +     NSLL  
Sbjct: 266 TGSATNAM-GVTYELNVIAATVIGGAN-----LMGGVVYALGAPIGAALVELIRNSLLLA 319

Query: 313 DCSFNMRHTTLMVIALFLVIL 333
                 +   + +  +  V+L
Sbjct: 320 GIPALWQQFFVGLFLILAVLL 340


>gi|114706524|ref|ZP_01439425.1| ABC sugar (ribose) transporter, inner membrane subunit [Fulvimarina
           pelagi HTCC2506]
 gi|114537916|gb|EAU41039.1| ABC sugar (ribose) transporter, inner membrane subunit [Fulvimarina
           pelagi HTCC2506]
          Length = 338

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/297 (11%), Positives = 78/297 (26%), Gaps = 16/297 (5%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R + +     +  V   L          S   + ++  +     + A G + V+   G L
Sbjct: 20  RFDLHVWGPVIALVALVLFGMSLNDQFLSAGNVTNVLARSSFIGIIAVGATFVITIGG-L 78

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A  A   +I+ +    S+ +          AC  +                 
Sbjct: 79  DLSVGSMSAFLAGLTIIVLNAMVPSLGISWVTIIFGMLACLALGLSAGFLNGILITVGRI 138

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
                    + I    +     G  ++                             + + 
Sbjct: 139 EAFIVTLGTLGIFRSLVIWLADGGTLSLNFELREVYRPVYY----------GGIFGIAWP 188

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           ++    ++    + +R+TA       I  N +        +   +L  + +    +G+A 
Sbjct: 189 IIVFALVAILGEIAMRKTAYGRHAAAIGSNDQVARYSAIPVERVRLVTYMLQGMLVGVAT 248

Query: 247 AFFAASRDRISPDMFKFSENIIVISI-----VILGGMTSLSKIAKATAILIGVVELC 298
             +       S       E   + ++     V+ GG   +        IL  +  + 
Sbjct: 249 IMYVPRLGSASSTTGLLWELEAIAAVIIGGTVLKGGFGRVWGTVIGVLILSLIDNIL 305


>gi|315633872|ref|ZP_07889161.1| galactoside ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
 gi|315477122|gb|EFU67865.1| galactoside ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
          Length = 336

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/297 (7%), Positives = 79/297 (26%), Gaps = 8/297 (2%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
               +     ++  Q  + ++ A G++ ++ + G   L+      + A     +      
Sbjct: 34  PTFLNLVNFSNILTQSSVRLIIALGVAGLLVTQG-TDLSAGRQVGLAAVISATMLQSMEN 92

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              +   +  +      + +             +   +    F   +     +    +  
Sbjct: 93  MNRVFPDLGEIPIPVVILAVCAVGAVIGLVNGLVIAYLNVTPFIATMGTMIIVYGFNSLY 152

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
           Y A     +     +   F +       +++    +   +C     ++    +T      
Sbjct: 153 YDAVGGSPIAGFSENFSVFAQGFIRLGSFKLSYITIYAAICAFCVWVMWN--KTRFGKNI 210

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N +A       +    +  + ++  F    G   A      + ++    E   + 
Sbjct: 211 FAIGGNPEAAKVSGVNVARNLVVIYMIAGMFYAFGGMLEAGRIGSATNNLGFMYELDAIA 270

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + V+      GG+ ++  +     I   +      +    +   +       +    
Sbjct: 271 ACVVGGVSFAGGVGTVIGVITGVIIFTVINYGLTYIGVNPYWQYIIKGSIIILAVAI 327


>gi|313680236|ref|YP_004057975.1| inner-membrane translocator [Oceanithermus profundus DSM 14977]
 gi|313152951|gb|ADR36802.1| inner-membrane translocator [Oceanithermus profundus DSM 14977]
          Length = 315

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/327 (9%), Positives = 77/327 (23%), Gaps = 27/327 (8%)

Query: 1   MSIFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVV 60
           M +    L+  + I+ L  +              ++  + ++ +Q  I  + A G++ V+
Sbjct: 1   MKLNKSLLSSSEFIVFLGLLAVGAFFAFTSPVFLTKFNLLNILLQSSIQGIIAIGMTFVI 60

Query: 61  GSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
            + G + L+     A+      ++         +                          
Sbjct: 61  LTAG-IDLSVGSVVALSGVLMALMLHGGVPVWAV---------------------ILINL 98

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
              +A           +     I                            F        
Sbjct: 99  AFGVAVGAFHGFSITKIGMAPFIVTLATMAMARGLTMVFSDGKTIFDFPPAFEFFGAGQI 158

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             +   ++     +    + LR T +      +  N KA               + VS  
Sbjct: 159 GPISVAVVIFLLYALVAEVVLRSTVLGRNIYAVGSNIKAAALSGIRTHGVLYFVYIVSGV 218

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVV 295
              +AG           P      E   + +++I     +GG  ++        ++  + 
Sbjct: 219 SCAIAGLVLTGRLGAAMPTAAMGYELDAIAAVIIGGASLMGGKGTIVGTIIGVLLIGVIN 278

Query: 296 ELCCGMNFYYFNSLLKFDCSFNMRHTT 322
                +N   F           +    
Sbjct: 279 NGMNLLNVPPFWQSFLKGAVIFLAVMI 305


>gi|301632012|ref|XP_002945085.1| PREDICTED: ribose transport system permease protein rbsC-like
           [Xenopus (Silurana) tropicalis]
          Length = 290

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/294 (9%), Positives = 79/294 (26%), Gaps = 18/294 (6%)

Query: 38  YIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIP 97
              ++   I +  M A+G+++V+  +G + L+     A+ +     +             
Sbjct: 5   NQLNILRNIAVPGMIAFGMALVI-IVGEIDLSVGSMVAVSSCITAWVVRWASGGELEAGV 63

Query: 98  VSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLY 157
            S ++     ++                    +   +  +     I++      +A    
Sbjct: 64  GSVILGFCASVLFAAGVGVL------------NGALRYHVGVPTFISSLAMMAALAGMAN 111

Query: 158 FLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQ 217
            +            +          +   +  +        L  R T    A   +  N 
Sbjct: 112 LITNGTPIESFPSWYNVIGSGRAFNVPIPVYLLGVTFLLADLLTRFTTFGRAIYAVGGNL 171

Query: 218 KAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVI--- 274
           +A       +   K     ++S    + G  +++     +  + K  E  ++ +++I   
Sbjct: 172 EAARLSGIPVWRTKTLCLVITSVLAAIGGILYSSLIGSGNSTIAKGMELEVISAVIIGGI 231

Query: 275 --LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVI 326
              GG  ++         L  ++       F  F   +              + 
Sbjct: 232 SLAGGKGTIWGAFVGVLFLGTLLNAMTLWGFNPFWQDVVKGSLILGAVLLNFLF 285


>gi|225412446|ref|ZP_03761635.1| hypothetical protein CLOSTASPAR_05669 [Clostridium asparagiforme
           DSM 15981]
 gi|225042028|gb|EEG52274.1| hypothetical protein CLOSTASPAR_05669 [Clostridium asparagiforme
           DSM 15981]
          Length = 314

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 93/304 (30%), Gaps = 15/304 (4%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +  +  + L+Y + A G+ I    L    L+    + +GA       +     +  + P+
Sbjct: 5   LLGILEEGLVYAIMALGVYITYKILDFPDLSVDGTFPLGAALTAAGIANGLPFVGKISPI 64

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           +A+        +           L +  L+   I    L        GKA + +  +   
Sbjct: 65  AALFISFFVGALAGCCTGLIHVKLKVRDLLSGIIVMTALYSINLRIAGKANLPIFSQETI 124

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                              +    +  +LL +  +   ++    +T      R + DN  
Sbjct: 125 FANEFLEKQVPE------ALKPYTVALILLLIVAVCKVLLDLYLKTRSGYLLRAVGDNDV 178

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGG- 277
              SL       K+   A+++ F  +AG+ +   +             +I ++ VI+G  
Sbjct: 179 LVTSLAKDKGMVKIVGLAIANGFAALAGSVYCQQKGFFEI-STGTGTIVIGLANVIIGTQ 237

Query: 278 ----MTSLSKI---AKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFL 330
                  +         + +    V L   +   Y                 L+   LFL
Sbjct: 238 LFKRFGFVKGTTAVIAGSILYKACVSLALNLGGQYRLGDYIVSIPITASDLKLITSILFL 297

Query: 331 VILM 334
           VIL+
Sbjct: 298 VILL 301


>gi|302336762|ref|YP_003801968.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
 gi|301633947|gb|ADK79374.1| inner-membrane translocator [Spirochaeta smaragdinae DSM 11293]
          Length = 335

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/308 (10%), Positives = 91/308 (29%), Gaps = 18/308 (5%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + ++ ++    +        + +    +        + A G+  V+   G + ++     
Sbjct: 12  VLVVVLILSAAITAVNPNFLTLENGFDLLKSYSFMGVLAIGILFVL-ISGGIDISFAATA 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            +  Y   ++  + G ++   + ++ ++    G   G    KF+   +      M+  + 
Sbjct: 71  TVAEYVMAVVSIKLGGNMITSLLLATLVGLLLGAFNGFLISKFKIAPIITTIATMNFYYG 130

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +            +          T+           S       +  + L    ++
Sbjct: 131 ILTVITGGKWIYALPEWFRAFADIRVFTL----------VSRAGTPYGLSVITLFWAVIT 180

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 LR T +      I  +  +   +   +   ++  ++      G+AG   A    
Sbjct: 181 VLAFFLLRYTMLGRGIYAIGGDIGSAERVGFPVRRLQIFVYSFMGMMAGIAGVIQALLVQ 240

Query: 255 RISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNS 308
            ++P+     + + VI+ V+LGG        S+        ++  V      +       
Sbjct: 241 TVAPNSI-VGKELDVIAAVVLGGASLSGGFGSVGGTLLGVFLIAVVKNGMTLVKIPAVWY 299

Query: 309 LLKFDCSF 316
            +      
Sbjct: 300 DVFIGAVI 307


>gi|295700859|ref|YP_003608752.1| sugar ABC transporter ATPase [Burkholderia sp. CCGE1002]
 gi|295440072|gb|ADG19241.1| inner-membrane translocator [Burkholderia sp. CCGE1002]
          Length = 399

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 47/359 (13%), Positives = 95/359 (26%), Gaps = 47/359 (13%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           K   +L  +AV++     L  GA  + + + ++  Q+ I  M A G+  V+   G + L+
Sbjct: 33  KILALLIAVAVIWIFFSALTHGAFVTPRNLSNLLRQMSITGMLACGMVFVI-IAGEIDLS 91

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI----- 124
                 +      IL       I + IPV  ++    G+  G  S   R     +     
Sbjct: 92  VGSLLGLLGGVAAILDVNRHWPIGVTIPVVLLLGIVVGLFNGWWSTYRRVPSFIVGLGGM 151

Query: 125 ------------------------------------ATLIMSEIFQNILIKWKPITNGKA 148
                                                TL +        +  +   N + 
Sbjct: 152 LAYRGILLGVTGGSTIAPVSDSFVFVGQGYLPRLAGDTLAVVLFVLLAFLTIRQRANRQR 211

Query: 149 GIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISN 208
                   +     V           + +     +   +L +  L         +T    
Sbjct: 212 YQLRVVPFWQDVAKVVGAGAILAGFVAMLDNYGGIPVPVLLLLALLGIFTWIATQTVFGR 271

Query: 209 AWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENII 268
               +  N +A           KL+ FA+       AG    A     SP      E   
Sbjct: 272 RIYAVGSNLEATRLSGVNTDRVKLAIFALMGLMCAFAGIVNTARLAAGSPSAGSMGELDA 331

Query: 269 VISIVILG-----GMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + +  I G     G  ++        ++  +      ++   +  ++       +    
Sbjct: 332 IAACFIGGTSMRGGSGTVYGALIGALVMASLDNGMSMLDVDAYWQMIVKGGILVLAVWI 390


>gi|237729157|ref|ZP_04559638.1| ABC transporter permease [Citrobacter sp. 30_2]
 gi|226908886|gb|EEH94804.1| ABC transporter permease [Citrobacter sp. 30_2]
          Length = 342

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 76/266 (28%), Gaps = 30/266 (11%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
             +  +     + A G+++V+   G + L+     AI   +   +       + +++  +
Sbjct: 58  IDILNRAAPVALLAIGMTLVIA-TGGIDLSVGAVMAIAGATTAAMTVAGHS-LPVVLLAA 115

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
                  G+  G+     +        ++M                  AG  VA  +   
Sbjct: 116 LGSGILAGLWNGILVAILKIQPFVATLILM-----------------VAGRGVAQLITSG 158

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
                +      F S  ++       + L          L  R+TA+      +  N +A
Sbjct: 159 QIVTFNSPELSWFGSGSLLLFPTPVIIALLTL---VVFWLLTRKTALGMFIEAVGINIRA 215

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
             +         +  + +S     +AG    A       +       +  I  V++GG  
Sbjct: 216 AKNAGVNTRIIVMLTYVLSGLCAAIAGIIVTADIRGADANNAGLWLELDAILAVVIGG-G 274

Query: 280 SLSK-------IAKATAILIGVVELC 298
           SL               I+ G+    
Sbjct: 275 SLMGGRFNLLLSVVGALIIQGMNTGI 300


>gi|221209635|ref|ZP_03582616.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia multivorans CGD1]
 gi|221170323|gb|EEE02789.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia multivorans CGD1]
          Length = 347

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/321 (12%), Positives = 93/321 (28%), Gaps = 30/321 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  VV  + + +   +  S   ++++  Q+ I  + A G++ V+   G + L+     A
Sbjct: 52  LVGLVVVCIAMMIASPSFLSAANLENVLRQVSINAIIAVGMTCVI-LTGGIDLSVGSVMA 110

Query: 76  I-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           + G  +  ++ +       L I ++          + +         + +AT+ ++    
Sbjct: 111 LSGTLAAGLMVAGVNAVAALAIGIAVGFGFGFLNGVFVAFAGMPPIIVTLATMGIARGLA 170

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I     PI                                       +   +L M  + 
Sbjct: 171 LIYTGGYPIDGLPD----------------------WVAFFGSGKVFGIQAPVLIMLVVY 208

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A   L L R         I  N++A       +   KL  + ++     +A         
Sbjct: 209 AIAWLLLERMPFGRYVYAIGGNEQATRLTGVRVARVKLIVYTLAGVTSALAAIVLTGRLM 268

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                       +  I+ V++GG              I    +   +     N L     
Sbjct: 269 S-GQPNAGVGFELDAIAAVVMGGT-----SISGGRGAILGTLVGALLLGVLNNGLNMIGV 322

Query: 315 SFNMRHTTLMVIALFLVILMR 335
           +  +++     I L  + + R
Sbjct: 323 NPYVQNVIKGGIILLAIYISR 343


>gi|325002012|ref|ZP_08123124.1| inner-membrane translocator [Pseudonocardia sp. P1]
          Length = 356

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 100/324 (30%), Gaps = 13/324 (4%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             + +      A+   +  +      ++     ++        + A G+++++   G   
Sbjct: 33  FTRPEAGTVAAALAIFVFFYAIAEPFRTLDSFATVLYASSTIGIVAVGVALLM-IGGEFD 91

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+  +A    A +  ++  +  L++W+ + +S +++   G + G   +           L
Sbjct: 92  LSSGVAVTTSALTAALITYQLSLNMWVGVVLSLVVALLVGFVNGWLVVTTGIPSF----L 147

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
           I   +F  +      +T G  G    D    L   V +   F        +      +  
Sbjct: 148 ITLSMFFILRGANIGVTKGITGTVATDNASELDGFVSAHTIFASDVPLGFMTVKVTVFWW 207

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           LG+    A     L RT + N       N  +  ++   +   K+  F        + G 
Sbjct: 208 LGLA---AVASWILFRTRLGNWIFAAGGNAASARAVGVPVKRVKIGLFMGVGFVGWVLGM 264

Query: 248 FFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMN 302
               +   +   +   +E I +++ V+      GG  S    A    IL    +      
Sbjct: 265 HILFNFSSVQSGLGVGNELIYIVAAVVGGCLLTGGFGSAIGAAIGAFILGMTTQGIVFAG 324

Query: 303 FYYFNSLLKFDCSFNMRHTTLMVI 326
           F              +     + I
Sbjct: 325 FDPNWFYTFLGAMLLLAVVLNLYI 348


>gi|317496447|ref|ZP_07954799.1| branched-chain amino acid transport system/permease [Gemella
           moribillum M424]
 gi|316913462|gb|EFV34956.1| branched-chain amino acid transport system/permease [Gemella
           moribillum M424]
          Length = 352

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 80/269 (29%), Gaps = 1/269 (0%)

Query: 44  IQILIYVMFAWGLSIVVGS-LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMI 102
           I +    +   GLS+      GL ++     + +G     I+  +     + ++ V++++
Sbjct: 51  IFVSTIPLICTGLSVAFAFRTGLFNIGAEGQFIMGGLFAGIVAIKMQGMNFYVVLVASIL 110

Query: 103 SGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTT 162
           +G     +      +      I+ ++++ +     + +      K      D +      
Sbjct: 111 AGIVVGGLWAAIAGYLKARFNISEVVVTIMLNYTALYFVQFAVPKFIRGNNDIISQPLVA 170

Query: 163 VRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFS 222
                         +     +   L    F      + + +T      R++  N  A   
Sbjct: 171 SDGSGYLKNDLIEGIFNNHRLGTDLFLAIFAVIIFYIVMEKTVFGYELRSVGFNPSASRF 230

Query: 223 LNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLS 282
           +   +    + + A+S AF G+ GA +             F     +   V L G  +  
Sbjct: 231 VGMKVNRNTVLSMAISGAFAGLGGALYNMGPVGQVVAGSTFQGFGYMGIAVALIGANTAL 290

Query: 283 KIAKATAILIGVVELCCGMNFYYFNSLLK 311
                  +   +  L   + F      + 
Sbjct: 291 GSFLGALLFGFLGVLTPQLAFIGIPKDIA 319


>gi|313201691|ref|YP_004040349.1| inner-membrane translocator [Methylovorus sp. MP688]
 gi|312441007|gb|ADQ85113.1| inner-membrane translocator [Methylovorus sp. MP688]
          Length = 293

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 90/305 (29%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A ++ +     G+  WL   +
Sbjct: 8   LLGGLLAGVMYSLLAIGFVLIYKASGVFNFAQGSMVLFAALTF-VSLLERGIPFWLTFAI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +        +    L+   +   I   + +     ++        G            
Sbjct: 67  TLLTMVVLAWAIERFMLRKLVNRPPITLFMATLGLSYMIEGLAQAVWGAQVH-------- 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F  +       L   +     +T    + R + D+Q 
Sbjct: 119 ---GLELGISDEPLELGGMLLSQFDIFAAGVAGVLVIFLSWLFNKTRTGISLRAVADDQL 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +    L  +AV+     +AG  + A               +  + ++I+GG 
Sbjct: 176 AALAVGIKLQRIWLIVWAVAGFVGLVAGLLWGARLGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+    +L            ++              +   + +L+R   
Sbjct: 233 TSIGGAIVGGLIIGASEKLAEVFIGPIIGGGIENWFP---------YVLALVFLLVRPAG 283

Query: 339 LLRLR 343
           +   R
Sbjct: 284 IFGER 288


>gi|312134376|ref|YP_004001714.1| inner-membrane translocator [Caldicellulosiruptor owensensis OL]
 gi|311774427|gb|ADQ03914.1| inner-membrane translocator [Caldicellulosiruptor owensensis OL]
          Length = 348

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/318 (10%), Positives = 90/318 (28%), Gaps = 5/318 (1%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           ++    +   +   +  + +    + + + ++   +  Y +   G++ ++   G + L+ 
Sbjct: 16  WEARTLIALFILVAIFGIKVPNFLTVENMLTVTKHVAEYALLGIGMTFII-LTGGIDLSV 74

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
                  A             I L      +      +I+    +      L    +   
Sbjct: 75  GSIVGFAAMIAG---GFIYEGIVLQKLGITIFLSIPLVIILTLIISALVGTLNGLIISYV 131

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
            I   I             +  ++ + F     +       F      +   +   ++  
Sbjct: 132 RIPPFIATLGTMYVFRGFALLRSNGMTFPNLQGKPDYGNTGFEWLGQGFIGGIPVAVIIF 191

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
             ++      L +T        +  N+KA       +   K+  + +S    G+ G   A
Sbjct: 192 IIVAIIAAYLLSKTPFGWYVYAVGGNEKAAELSGLKVKKIKILCYTISGFCAGLVGLIVA 251

Query: 251 ASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLL 310
           +     S         +  I+  +LGG +    I      +IG   +    +      + 
Sbjct: 252 SEL-VASHPAIGEGWEMNAIAAAVLGGASLSGGIGSIGGTVIGAFIIGVLNDGMVMMGVS 310

Query: 311 KFDCSFNMRHTTLMVIAL 328
           +F          ++ + L
Sbjct: 311 EFWQKVVKGIVIVLAVGL 328


>gi|300937775|ref|ZP_07152573.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 21-1]
 gi|300457216|gb|EFK20709.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 21-1]
          Length = 323

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 100/315 (31%), Gaps = 18/315 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +++  L LL VV  + L        +   +  +     +  + A GL  VV   G + ++
Sbjct: 7   RHEFWLALLIVVLFVGLAWRSDEFLTFGNLYDLANNYAMLTILACGL-FVVLISGGIDIS 65

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 I  Y  V+L  + G +  +   ++  I    G+I  L   + R   + I     
Sbjct: 66  FPAMTIIAQYGMVLLLQKIGGNFAVAFALAGGIGILLGLINALLVNRLRVPSIIIT---- 121

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                   I    I  G           +               +    Y+  +   L+ 
Sbjct: 122 --------ISTLNIFYGLLLWLSKGVWLYDFPPWFEQGVMLFKYTDADGYDYGLGLPLIA 173

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           M  +       +  T++      +  N+++   +  +++  +L  +       G AG   
Sbjct: 174 MITVVLLTAFIMNFTSVGRKIYALGGNRESASRIGFSVLKLQLFVYGYMGLMSGAAGVVQ 233

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           + +   ++PD     E  ++ ++V     +LGG  +L+       +L  +      +   
Sbjct: 234 SWTVMTVAPDSLLGYELTVLAAVVLGGTSLLGGRGTLTGTLLGVVLLAVMQNGLNLLGVS 293

Query: 305 YFNSLLKFDCSFNMR 319
            +   L         
Sbjct: 294 PYWQTLITGIIIVAS 308


>gi|260460989|ref|ZP_05809238.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
 gi|259033023|gb|EEW34285.1| Monosaccharide-transporting ATPase [Mesorhizobium opportunistum
           WSM2075]
          Length = 363

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 77/277 (27%), Gaps = 13/277 (4%)

Query: 30  LGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYG 89
           +G   ++  +  + +Q+ I  + A G++ V+   G + L+          +  ++   + 
Sbjct: 62  VGGLFNEARLQIIILQVSIVGIIAIGVTQVI-ITGGIDLSSGSIVG----ATAMIAMSFA 116

Query: 90  LSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAG 149
               +    +            LP +      +             I     P      G
Sbjct: 117 QVATVNGNPNPKAMFLAQGWTDLPVIVPVLVAIGCGLFAGLVNGALIAYTRIPPFIATLG 176

Query: 150 IYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNA 209
           + V  R      +    I F     + +   +    + L +        L +  T     
Sbjct: 177 MMVTARGIAKWWSKGQPISFPTESFAAIGKGLMPVIIFLSLA---ILFQLIMTYTRYGKH 233

Query: 210 WRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIV 269
              I  N+ A       I   K+  + ++     +A    ++        M    E   +
Sbjct: 234 CYAIGSNEDAARMSGIKIANHKILVYVIAGILAALAAVVLSSKNLTAQSGMGVMYELDAI 293

Query: 270 ISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
              VI      GG  S+      + I   ++     +
Sbjct: 294 AMAVIGGVSLSGGRGSIIGTVIGSLIFGVIISGFTFL 330


>gi|170692534|ref|ZP_02883696.1| inner-membrane translocator [Burkholderia graminis C4D1M]
 gi|170142190|gb|EDT10356.1| inner-membrane translocator [Burkholderia graminis C4D1M]
          Length = 271

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 49/296 (16%), Positives = 104/296 (35%), Gaps = 27/296 (9%)

Query: 47  LIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGAC 106
           ++Y + A GLSIV G L  ++      Y +GAY       ++ L+ W  + V  +  GA 
Sbjct: 1   MLYFLLAVGLSIVFGLLRFVNFAHGAFYLLGAYFCY-QAMQWSLNFWTALVVVPIAVGAL 59

Query: 107 GMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSL 166
             ++    L+          ++++     ++ +   +  G  G  V       G  +   
Sbjct: 60  AWVVEKLILRHVYAQQHEFHILVTVGLALVVQECAILVWGPLGDNVPVPDMLNGVVI--- 116

Query: 167 IRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTT 226
                      +Y  +  +V+     L+A +   L  T + +A R   ++ +    L   
Sbjct: 117 -------WGSFVYPKYRLFVIGFTAVLAALLWWVLEGTRLGSAVRAGSESTEMVSLLGIN 169

Query: 227 IIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAK 286
           ++      FA+ +A   +AG   A  R        +      V+ +V    M +      
Sbjct: 170 VLRVFSLVFALGAATAALAGVLAAPIRGVDPFMGIEALGVAFVVVVVGG--MGNFLGALV 227

Query: 287 ATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRL 342
              ++  V  +   +              +      ++ +A+  V+L+R + LL  
Sbjct: 228 GGLLVGIVQSVMSTL--------------WPEGARLMIYVAMAAVLLLRPNGLLGR 269


>gi|238791335|ref|ZP_04634974.1| Amino acid or sugar ABC transport system, permease protein
           [Yersinia intermedia ATCC 29909]
 gi|238729468|gb|EEQ20983.1| Amino acid or sugar ABC transport system, permease protein
           [Yersinia intermedia ATCC 29909]
          Length = 289

 Score = 49.5 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/282 (12%), Positives = 75/282 (26%), Gaps = 17/282 (6%)

Query: 46  ILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGA 105
               V+ A GL+++ G +G+++L        GAY  +++        + ++  +   +  
Sbjct: 18  FAYLVLAALGLAVIFGMMGVINLAHGEFIMCGAYVTILMNKAGLPLPFAMLAGTLAAAFF 77

Query: 106 CGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRS 165
            G++  L      G                +             +  +  L    +    
Sbjct: 78  GGVVERLVVRHLYGR---------------LYDSVVATWAISLIVQQSMLLIAGPSLEGL 122

Query: 166 LIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNT 225
              F  F      +  +   +      +   +      T      R    N +    L  
Sbjct: 123 STPFGSFTLGEYSFATYRALLPFFAIAILMVLYWLFFHTNYGVCARATIQNARMASCLGL 182

Query: 226 TIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIA 285
                    FA+ +   G+AGA +A +   +      F         V++GG   L    
Sbjct: 183 ETDRIYTLTFALGAGLAGLAGAIYAPTLTAVPTMGSSFIVQ--AFVSVVVGGANVLVGTI 240

Query: 286 KATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
            A   L  +              +     +  +       I 
Sbjct: 241 PAAIALGAIQTGLNSWYGQLAGQIGLLVTAVLVIRLLPNGIG 282


>gi|307944747|ref|ZP_07660085.1| ribose transport system permease protein RbsC [Roseibium sp.
           TrichSKD4]
 gi|307771961|gb|EFO31184.1| ribose transport system permease protein RbsC [Roseibium sp.
           TrichSKD4]
          Length = 336

 Score = 49.5 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 41/333 (12%), Positives = 97/333 (29%), Gaps = 29/333 (8%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           RL     +L    +   ++  L      + + + ++  Q +  V+ + G  IV+   G  
Sbjct: 16  RLFVKVGVLPFFLITALVIFTLLSPKFLTGQNLINVARQSVYLVLVSMGQMIVL-ISGGF 74

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+     A+ +    +    +       I V+ +     G  + L              
Sbjct: 75  DLSVGTLIALTSVVSALGMVWFAGMFPDAIWVAILFGALIGFGVALIV-----------G 123

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
           L+         +    +T G + +     L+  G    S + F    +        +   
Sbjct: 124 LVNGAGVAYFDVSPFIMTLGVSSVGAGFALFLTGGVPVSDLPFEFGDTFGFGRVFGIPVP 183

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           ++    + A + + + RT +      +  N KA            L A+ + +    + G
Sbjct: 184 VIVALVVIAVMWILMSRTRLGTQIYAVGGNIKAAHLSAINTKKTLLFAYVICALIASLTG 243

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGM 301
               A  +    ++        + + VI      GG+  +  +      ++ V       
Sbjct: 244 LLLTARVETGEANLGGTIALESIAACVIAGVSLRGGIGRVENVVLGAFFIVLVQNGM--- 300

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM 334
                          +     L+   L L ++ 
Sbjct: 301 ---------NLAQVSSYMQMVLLGALLILAVIF 324


>gi|307257496|ref|ZP_07539262.1| Galactoside transport system permease protein mglC [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307261907|ref|ZP_07543568.1| Galactoside transport system permease protein mglC [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306864008|gb|EFM95925.1| Galactoside transport system permease protein mglC [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306868407|gb|EFN00223.1| Galactoside transport system permease protein mglC [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 336

 Score = 49.5 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/297 (9%), Positives = 83/297 (27%), Gaps = 8/297 (2%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
            +  S +   ++  Q  + ++ A G++ ++ + G   L+      + A     L      
Sbjct: 34  PSFLSLRNFSNILSQSSVRLIIALGVAGLIVTQG-TDLSAGRQVGLAAVITATLMQSMEN 92

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              +   ++ +      + +             +   +    F   +     +    +  
Sbjct: 93  MNRVFPNLAEIPIPVVILAVCAIGAVIGLLNGFVIAYLNVTPFIATMGTMIIVYGINSLY 152

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
           Y A     +     S   F +    F  +++   Y+ +     +  +     +T      
Sbjct: 153 YDAVGGSPIAGFSDSFSTFAQGFFRFGDFKLS--YITIYAVVATLIMWTLWNKTRFGKNI 210

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             I  N +A       +    +  + +S  F    G   A      + ++    E   + 
Sbjct: 211 FAIGGNPEAARVSGVNVPLNLMGIYMLSGVFYAFGGMLEAGRIGSATNNLGFMYEMDAIA 270

Query: 271 SIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           + V+      GG+ ++  +     I   +      +    +   +       +    
Sbjct: 271 ACVVGGVSFAGGVGTIIGVVTGVIIFTVINYGLTYIGVNPYWQYIIKGGIIVLAVAI 327


>gi|302562292|ref|ZP_07314634.1| ABC sugar transporter, permease component [Streptomyces
           griseoflavus Tu4000]
 gi|302479910|gb|EFL43003.1| ABC sugar transporter, permease component [Streptomyces
           griseoflavus Tu4000]
          Length = 319

 Score = 49.5 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 45/301 (14%), Positives = 98/301 (32%), Gaps = 29/301 (9%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           LR  ++D ++  L VV  LL F  +    +   +  +    L   + A  ++++V   G 
Sbjct: 9   LRAVRWDTVVGALLVVVLLLSFTTVDGFGNALNLSFLIGNTLPIALIALPMTLLV-VSGE 67

Query: 66  LSLNCVIAYAI-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI 124
           + L+      + GA    +      +   + + +   +       + +  L      + I
Sbjct: 68  IDLSVASTAGLSGAVMGALWNQGMSIETIIPVCLLIGVVCGLVNGLLVTRLGLPSLAVTI 127

Query: 125 ATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY 184
            TL        I++    +                          +   ++  I + F+ 
Sbjct: 128 GTLAAYRGIAQIVLGSDAV--------------------TDFPAQYLDFAAGRIGDTFVP 167

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
           Y  L    L A  ++ L  T    +   I  +++A       +   KL  F ++     +
Sbjct: 168 YAFLPFLALLAVAVVALHATPFGRSLFAIGASEEAARFAGIRVKRQKLVLFTLTGLMASL 227

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGM------TSLSKIAKATAILIGVVELC 298
            G F+A        D       + V++ V+LGG+       +L        +L  +  + 
Sbjct: 228 TGVFWALHYASARYDNAT-GLELSVVAAVLLGGIDFDGGKGTLGGAVAGVFLLGALQNVM 286

Query: 299 C 299
            
Sbjct: 287 S 287


>gi|284028250|ref|YP_003378181.1| inner-membrane translocator [Kribbella flavida DSM 17836]
 gi|283807543|gb|ADB29382.1| inner-membrane translocator [Kribbella flavida DSM 17836]
          Length = 339

 Score = 49.5 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 90/299 (30%), Gaps = 27/299 (9%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R   ++  +  + V+   +    +    + +    + + +L   + A  +++V+   G +
Sbjct: 18  RFANWNVAIIAVTVLVIAVAAATVDNFGTSQNFGFLVLDLLPIALVALPMTLVI-VTGEI 76

Query: 67  SLNCVIAYAI-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
            L+      +  A    +  +   +   + + +             +  L      + I 
Sbjct: 77  DLSVASTLGLCSAVMGSLWNANQPIETIIPVCLLLGAVLGAVNGFFVTVLGLPSLAVTIG 136

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
           TL +      +++                        V      +    +  I    +  
Sbjct: 137 TLALYRGLAFVVL--------------------GDGAVADFPALYTNWVTGTIGGTPLPN 176

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           VL+ +  L+    + L  T I  A   +  +++A           K   + VS    G+A
Sbjct: 177 VLIVIVALAVVFGVILHATPIGRAVFAVGASEQAARFAGVRPGRLKFWLYVVSGLVAGLA 236

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCC 299
           G  +         D     E  +V +++     I GG  +L  +     +L  +     
Sbjct: 237 GVLWTLRYSSARADNGAGLELAVVAAVLLGGVSIFGGKGALPGVIAGVVLLASLQNALR 295


>gi|229172654|ref|ZP_04300212.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus MM3]
 gi|228610786|gb|EEK68050.1| Branched-chain amino acid ABC transporter, permease [Bacillus
           cereus MM3]
          Length = 286

 Score = 49.5 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 103/305 (33%), Gaps = 27/305 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
             +     ++  + A GLS++ G + +L+      +A GA++ V + +  G  +  LI  
Sbjct: 8   FVNGISTGMLIFLLASGLSLIFGLMSVLNFAHGGLFAWGAFTGVWIFNMTGSYVLALIGA 67

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
            AM      ++         G+++    + +  +               +          
Sbjct: 68  IAMGMFLGFILERFLIRPVYGNHVRQLLVTLGGMLVL------------SECIKIFWGPN 115

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
                  L     +    VI   +  +V+L    +  +++L L++T I    R    +++
Sbjct: 116 PIGAKLPLWLQGSYTFEGVILIKYRLFVILIGIIIYIALLLLLKKTKIGLMIRAGVIDKE 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
              +L   +       F + +    + G   A     I  +M      I+   +VI+GG+
Sbjct: 176 MVQALGINVKAIFSFVFLLGAGMAALGGFLLAPYSGVIFAEM-GMQYAILAFIVVIIGGL 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            S+   A A+ I+                               + ++ L   ++++ + 
Sbjct: 235 GSVQGSAIASLIVGLAGAFTAYF--------------IPDLSLAINMLMLLFFLIVKPNG 280

Query: 339 LLRLR 343
           L+  +
Sbjct: 281 LVGEK 285


>gi|221195914|ref|ZP_03568961.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia multivorans CGD2M]
 gi|221202587|ref|ZP_03575606.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia multivorans CGD2]
 gi|221176521|gb|EEE08949.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia multivorans CGD2]
 gi|221182468|gb|EEE14868.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family,
           permease protein [Burkholderia multivorans CGD2M]
          Length = 347

 Score = 49.5 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 40/321 (12%), Positives = 93/321 (28%), Gaps = 30/321 (9%)

Query: 16  CLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYA 75
            +  +V  + + +   +  S   ++++  Q+ I  + A G++ V+   G + L+     A
Sbjct: 52  LVGLIVVCIAMMIASPSFLSAANLENVLRQVSINAIIAVGMTCVI-LTGGIDLSVGSVMA 110

Query: 76  I-GAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           + G  +  ++ +       L I ++          + +         + +AT+ ++    
Sbjct: 111 LSGTLAAGLMVAGLNAVASLAIGIAVGFGFGFLNGVFVAFAGMPPIIVTLATMGIARGLA 170

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            I     PI                                       +   +L M  + 
Sbjct: 171 LIYTGGYPIDGLPD----------------------WVAFFGSGKVFGIQAPVLIMLVVY 208

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A   L L R         I  N++A       +   KL  + ++     +A         
Sbjct: 209 AIAWLLLERMPFGRYVYAIGGNEQATRLTGVRVARVKLIVYTLAGVTSALAAIVLTGRLM 268

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
                       +  I+ V++GG              I    +   +     N L     
Sbjct: 269 S-GQPNAGVGFELDAIAAVVMGGT-----SISGGRGAILGTLVGALLLGVLNNGLNMIGV 322

Query: 315 SFNMRHTTLMVIALFLVILMR 335
           +  +++     I L  + + R
Sbjct: 323 NPYVQNVIKGGIILLAIYISR 343


>gi|13477065|ref|NP_108636.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14027829|dbj|BAB54422.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 338

 Score = 49.5 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 85/296 (28%), Gaps = 15/296 (5%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  + V   ++  +F+          ++     +  + + GL++V+   G + L+    
Sbjct: 23  LVWFMLVFVLVVFSIFIPNYFQLGIFANIIEASSVLGVMSIGLALVI-IAGHMDLSVESV 81

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIF 133
            A+ A +  I                 +        + +P        +       +   
Sbjct: 82  AALSAMAVGI---------LFCSSGIGLGVQLHPEWLMVPVSLLLALTVGGLIGAFNGFL 132

Query: 134 QNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFL 193
              +     I    + I+V   +  +     +           +   I +          
Sbjct: 133 VVRVKMSAFIITLASYIWVRGLVLVISGGRSAQDLAPAIRWFGIQRLIGLPLTAWIAIAC 192

Query: 194 SASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASR 253
                L + +T        I  N+ A F     +    + AF ++ A  G+AG   A   
Sbjct: 193 FVVFSLIMAKTPFGRHLVMIGGNETATFRAGIRVNRNLIIAFVLAGAIAGLAGWLLAIRT 252

Query: 254 DRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFY 304
              + ++          ++VI      GG+ +L  +     +L  +      M   
Sbjct: 253 SGATANLGVGLLFNAFAAVVIGGVSLKGGVGTLPGVYAGVLLLSAINTAINLMGLP 308


>gi|300714913|ref|YP_003739716.1| ribose/xylose/arabinose/galactoside ABC transporter permease
           [Erwinia billingiae Eb661]
 gi|299060749|emb|CAX57856.1| Putative ribose/xylose/arabinose/galactoside ABC-type transport
           systems, permease components [Erwinia billingiae Eb661]
          Length = 326

 Score = 49.5 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 88/313 (28%), Gaps = 25/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + L  +   ++         S     ++  Q    ++ A  +++V+ + G + L+     
Sbjct: 20  IALFFIFCCVVFSFITSNFLSSTNWLNIIRQSAPLLIVATAMTLVI-TTGGIDLSVGSTL 78

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+      I    +GL   +++    M+    G I G            +    ++ +  
Sbjct: 79  ALVGALSAIALKSWGLPWPVVLIGGLMLGALVGAINGFFIAYEGIPAFIVTLATLAVVRG 138

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L+                 +    +        F       +  I M  ++  +  + 
Sbjct: 139 VALL-----------------ITQGYSIPIPADSPFTLMGRAWVVGIPMPALIGIVVLIV 181

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             I+L   R         I  N +             +  + +S     +AG    A   
Sbjct: 182 GHIVLNHMR--FGRYVTAIGANTEGARRSGINTKAVTMRVYMISGMAAALAGMIITARLG 239

Query: 255 RISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
             S +  +  E  ++ ++V     + GG  ++         +  +       +   F + 
Sbjct: 240 SGSSNQGEGFELQVIAAVVLGSTSLFGGFGTIIGTLLGALSIAIIQNGLILSHISPFYTQ 299

Query: 310 LKFDCSFNMRHTT 322
           +       +    
Sbjct: 300 IATGTIILLAIWL 312


>gi|121609090|ref|YP_996897.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
 gi|121553730|gb|ABM57879.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2]
          Length = 338

 Score = 49.5 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 98/313 (31%), Gaps = 23/313 (7%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L  +      L         S +   ++  +I    + A G+S V+   G + L+     
Sbjct: 32  LGAVLAGMVALFSSLSEYFWSAETFITIANEIPALAVMAVGMSFVLIIAG-IDLSVGSVM 90

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+ A        ++G ++     ++      CG I G  ++ +R                
Sbjct: 91  ALAAAISAAAIVQWGWTVPAAAALALATGLVCGTITGTIAVAWRLPSFI----------- 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            + +       G A +    R  ++G  +  L   F       I   FM  +LL +    
Sbjct: 140 -VSLGMLEAVRGSAYLVTDSRTQYVGDAISWLSAPFLGGIFGGISVAFMLALLLVIVAQL 198

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                    T        I  N++A           +++ FAV+    G+AG   +A  +
Sbjct: 199 VL-----SHTVFGRCVVGIGTNEEAMRLAGVDPRPIRITVFAVTGLLAGLAGLMQSARLE 253

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
              P+     E  ++ ++VI     +GG  S+   A    I+  +      +     +  
Sbjct: 254 AADPNAGAGIELQVIAAVVIGGTSLMGGRGSVVNTAFGVLIIAVLEAGLAQVGASEPSKR 313

Query: 310 LKFDCSFNMRHTT 322
           +            
Sbjct: 314 IITGGVIVAAVII 326


>gi|298293203|ref|YP_003695142.1| inner-membrane translocator [Starkeya novella DSM 506]
 gi|296929714|gb|ADH90523.1| inner-membrane translocator [Starkeya novella DSM 506]
          Length = 278

 Score = 49.5 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 86/288 (29%), Gaps = 17/288 (5%)

Query: 40  DSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVS 99
             +     I    A GL +V G + +++        +G Y+  ++ ++ GL+ WL IPV+
Sbjct: 6   LDIVTTAAILYAVATGLLLVFGVMKIINFAHGGLMTLGGYA-ALVTTQAGLNPWLAIPVA 64

Query: 100 AMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFL 159
           A+  G  GM +    ++        A L    +   I                       
Sbjct: 65  ALFGGVAGMAIERFVVRPLYARPLDAILATWGLSIIIGQIITLAFG-------------R 111

Query: 160 GTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKA 219
           G                  Y  +   ++     L  ++   L+ T +    R +  N+  
Sbjct: 112 GVQFTQSPLSGTIDLLGESYSAYRLALVGIAAVLGLALTALLQGTRLGLETRAVIMNEDL 171

Query: 220 FFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMT 279
              L       +   F + SA  G+AGA               +  N  ++ +V      
Sbjct: 172 ARGLGINSGLVRFLTFTLGSALAGIAGALITPLSSVDPQMGVPWLVNAFMLVLVS---GA 228

Query: 280 SLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIA 327
           SL  +  A  +L G   L           L     +  +        A
Sbjct: 229 SLVSLLVACLVLGGAQVLVATHFSPVLGGLTIAVLAAVILRIRPQGFA 276


>gi|111221950|ref|YP_712744.1| ribose ABC transporter permease [Frankia alni ACN14a]
 gi|111149482|emb|CAJ61173.1| Putative ribose transport system permease protein; putative
           membrane protein [Frankia alni ACN14a]
          Length = 393

 Score = 49.5 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 39/328 (11%), Positives = 92/328 (28%), Gaps = 27/328 (8%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
             +Y  +  L+AV+    +        +   + ++     I  + A   +++    G + 
Sbjct: 11  FERYGLVALLVAVIVFFSVNSATPQFDTVANLRNILTDQSILGILAIA-TVIPLVAGQID 69

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           L+      + +     L S+ G  ++  I  + ++    G I  +               
Sbjct: 70  LSVGPNAGLTSVLCAGLMSKSGWPLFPAILAAIVVGLVIGTINAILV------------- 116

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                  ++ I     T G + +  A  L + G    +               + +  + 
Sbjct: 117 ------ASVGINSIIATLGMSSVIGAAVLAYSGGVSITTGVSPGLLRLGPGKWLSVPTLF 170

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
             +  ++      L +T        I  N +A   +   +      +  ++    G AG 
Sbjct: 171 YFLLGIALVAWYLLEKTPTGKNLYAIGSNPRAALLVGIGVSRQTFGSLVLAGGIAGGAGV 230

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILG------GMTSLSKIAKATAILIGVVELCCGM 301
              A+    S      +  +  I+   LG      G  ++     A   L   V      
Sbjct: 231 LLVAAVGAGS-PQLGSNYTLPAIAAAFLGATSIQPGRYNVWGTITAVFFLAISVNGLTLW 289

Query: 302 NFYYFNSLLKFDCSFNMRHTTLMVIALF 329
               + S L    +  +     +     
Sbjct: 290 GAAPWVSELFDGAALIVGVGLGVYAGAL 317


>gi|26251135|ref|NP_757175.1| inner membrane ABC transporter permease YjfF [Escherichia coli
           CFT073]
 gi|227886717|ref|ZP_04004522.1| inner membrane ABC superfamily ATP binding cassette transporter
           permease protein YjfF [Escherichia coli 83972]
 gi|26111567|gb|AAN83749.1|AE016771_260 Hypothetical ABC transporter permease protein yjfF [Escherichia
           coli CFT073]
 gi|227836290|gb|EEJ46756.1| inner membrane ABC superfamily ATP binding cassette transporter
           permease protein YjfF [Escherichia coli 83972]
          Length = 331

 Score = 49.5 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 44/334 (13%), Positives = 98/334 (29%), Gaps = 24/334 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++ N    I   + V+  +          S + I ++        + A G++ V+   G 
Sbjct: 2   IKRNLPLMITIGVFVLGYIYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVI-LSGG 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A        +   +GLS  L  P+  ++  A G  MGL     +     I 
Sbjct: 61  IDLSVGSVIAFTGVFLAKVIGDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIIT 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L     +      +                   ++ P    +  + +  
Sbjct: 121 -----------LAGMFFLRGVSYLVSEESIPINHPVYDTLSSLAWKIPGGGRLSAMGLLM 169

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + +         I    RT   N    I  N  +   +  +     +  + +S+    +A
Sbjct: 170 LAVV-----VIGIFLAHRTRFGNQVYAIGGNATSANLMGISTCSTTIRIYMLSTGLATLA 224

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  F+         +      +  I+ V++GG         +  +   +  L        
Sbjct: 225 GIVFSIYTQ-AGYALAGVGVELDAIASVVIGG------TLLSGGVGTVLGTLFGVAIQGL 277

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
             + + FD + +   T + +  L  + +     L
Sbjct: 278 IQTYINFDGTLSSWWTKIAIGILLFIFIALQRGL 311


>gi|34762400|ref|ZP_00143401.1| Galactoside transport system permease protein mglC [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|256845426|ref|ZP_05550884.1| galactoside transport system permease mglC [Fusobacterium sp.
           3_1_36A2]
 gi|294785278|ref|ZP_06750566.1| galactoside ABC transporter, permease protein MglC [Fusobacterium
           sp. 3_1_27]
 gi|27887925|gb|EAA24992.1| Galactoside transport system permease protein mglC [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|256718985|gb|EEU32540.1| galactoside transport system permease mglC [Fusobacterium sp.
           3_1_36A2]
 gi|294486992|gb|EFG34354.1| galactoside ABC transporter, permease protein MglC [Fusobacterium
           sp. 3_1_27]
          Length = 339

 Score = 49.5 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 33/314 (10%), Positives = 94/314 (29%), Gaps = 4/314 (1%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           L L+     + + +      S +   ++  Q  +  + A G++ ++ + G   L+     
Sbjct: 21  LYLVLFCMLVAIIIKEPTFLSIRNFKNILTQSSVRTIIALGVAGLIVTQG-TDLSAGRQV 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A     L             +         +I+ +  +        +   +    F 
Sbjct: 80  GLSAVISGTLLQSMTNVNKAFPKLGEFSIFTTILIVVVVGVVIASINGIVVATLNVHPFI 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             +     +    +  Y       +   V    +F +       Y I    +   +    
Sbjct: 140 ATMGTMTIVYGINSLYYDKAGAAPISGFVEKYSKFAQGYIQIGSYTIPYLIIYAAIAT-- 197

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +     +T        +  N +A       ++   +  +A+S A+    G   A    
Sbjct: 198 LIMWTLWNKTKFGKNVFAVGGNPEAAKVSGVNVVLTLMGIYALSGAYYAFGGFLEAGRIG 257

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDC 314
             + +   F   +  I+  ++GG++    + + + ++ GV+ L        +  +  +  
Sbjct: 258 SATNN-LGFMYEMDAIAACVIGGVSFYGGVGRISGVITGVIILTIINYGLTYTGVSPYWQ 316

Query: 315 SFNMRHTTLMVIAL 328
                   ++ +A 
Sbjct: 317 YIIKGIIIVVAVAF 330


>gi|325262428|ref|ZP_08129165.1| ribose ABC transporter, permease protein [Clostridium sp. D5]
 gi|324032260|gb|EGB93538.1| ribose ABC transporter, permease protein [Clostridium sp. D5]
          Length = 329

 Score = 49.5 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 34/320 (10%), Positives = 92/320 (28%), Gaps = 21/320 (6%)

Query: 7   RLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLL 66
           R      +  LL ++  ++  +      +   + ++  Q+    + + G++ V+ + G  
Sbjct: 17  RFMGKYSLYLLLLLMIVIMSIVKPNNFPTWNNLSNVLRQMTPVGIISLGMTFVIVTAG-T 75

Query: 67  SLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIAT 126
            L+  +  A+ +             I L   ++ +++ A G   G  +      Y  +  
Sbjct: 76  DLSSGMMTALCSVLVAHFMIIGLFGIPLHPVIAVILTLAAGAAGGGLNGFL-ISYGGVPP 134

Query: 127 LIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYV 186
            I +     +      + +G   I    + +                     +   +   
Sbjct: 135 FIGTLAIMWVAKGLALLISGGQPITGFSKGFNF--------------IGGGTFMHVISMP 180

Query: 187 LLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAG 246
           +L          + L +T        I  N+ A       +   +++ + ++  F  +  
Sbjct: 181 ILIFIICCVISYIVLHKTMFGVHVFAIGGNKNAALVSGIHVKRVEMTCYIIAGVFTAIGA 240

Query: 247 AFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGM 301
               + +    P      E   +   +I      GG+ S+S       IL  +      +
Sbjct: 241 IVLTSRQQAGHPTTGTGYEMDAITCAIIGGASFSGGVGSISGTIVGVLILGVISNAMTML 300

Query: 302 NFYYFNSLLKFDCSFNMRHT 321
               +  +            
Sbjct: 301 QIDPYVQMTVKGILIAAAVL 320


>gi|310658082|ref|YP_003935803.1| d-ribose ABC transporter membrane protein [Clostridium sticklandii
           DSM 519]
 gi|308824860|emb|CBH20898.1| D-ribose transporter subunit ; membrane component of ABC
           superfamily [Clostridium sticklandii]
          Length = 332

 Score = 49.5 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 38/293 (12%), Positives = 97/293 (33%), Gaps = 30/293 (10%)

Query: 33  TKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSI 92
             ++  + ++ +QI +  + A+G +I++   G+L L+     A+      I       S+
Sbjct: 37  FMTKSNLTNVSVQIAVGTILAFGQTILI-ISGMLDLSSASVLALAG-VLSISAYLSTGSL 94

Query: 93  WLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYV 152
            +   V+ ++S AC M+ GL   KF+         +M+      L+              
Sbjct: 95  IIGFLVAVLVSVACNMLNGLMVTKFKTPPFIATLAMMTMARGAALL-------------- 140

Query: 153 ADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRT 212
                   T  +++ +   +        + +   ++ +          L  T    +   
Sbjct: 141 -------YTKGQNIYQIKDYTIFGQGNLMGIPIPIIFLVLTLIITWYILNHTVFGRSIYA 193

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           I  N++A  +    +   K+ AF  +   +G+AG  F +  +               ++ 
Sbjct: 194 IGGNEEAANASGINVDRVKMKAFIFNGILVGLAGVIFMSRVNG-GLPNGAVGYEFKALTA 252

Query: 273 VIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMR 319
            ++      GG+ +         I+  +  +   +    +   +       + 
Sbjct: 253 AVIGGTSFSGGVGTAFGTLAGAFIVGFLDNIMVMVGLDSYLQQIVRGAIIALA 305


>gi|297204059|ref|ZP_06921456.1| sugar ABC transporter integral membrane subunit [Streptomyces
           sviceus ATCC 29083]
 gi|197714721|gb|EDY58755.1| sugar ABC transporter integral membrane subunit [Streptomyces
           sviceus ATCC 29083]
          Length = 341

 Score = 49.5 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 34/314 (10%), Positives = 76/314 (24%), Gaps = 30/314 (9%)

Query: 27  FLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGS 86
                +  +++ + S+        M     S+V+   G   L+      I      +L  
Sbjct: 45  AFVNDSFLTERNLISILGASAALAMVVLAESLVL-ITGKFDLSLESVVGIAPAVGALLVL 103

Query: 87  RYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNG 146
               S W     +A+   A  ++  +         +             +++    +   
Sbjct: 104 PAAQSGWGTELPAALALPAVLVVGAVVGAFNGVLVVRFKLNAFIVTLAMLIVLRGLLVGA 163

Query: 147 KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAI 206
             G  +        +   +                 +   +L             +   +
Sbjct: 164 TKGKTLFGMPDSFYSLATTTFLNIPMSVWLAAVAFAVTGFVL-------------KYHRV 210

Query: 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSEN 266
             +   I  N  A  +    +    L  F V+     + G         IS +  +    
Sbjct: 211 GRSLYAIGGNADAARAAGIRVERVMLGVFVVAGVLASVGGIMQTGYVGAISANQGQNMIF 270

Query: 267 IIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHT 321
            +  + VI      GG  ++        +L  V  L        F               
Sbjct: 271 TVFAAAVIGGISLDGGKGTMFGALTGVLLLGVVQNLLTLAQVPSF-----------WIQA 319

Query: 322 TLMVIALFLVILMR 335
               I L  +++ R
Sbjct: 320 IYGGIILVALMIAR 333


>gi|191167254|ref|ZP_03029072.1| putative sugar ABC transporter, permease protein [Escherichia coli
           B7A]
 gi|190902707|gb|EDV62438.1| putative sugar ABC transporter, permease protein [Escherichia coli
           B7A]
          Length = 331

 Score = 49.5 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 98/334 (29%), Gaps = 24/334 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++ N    I   + V+  L          S + I ++        + A G++ V+   G 
Sbjct: 2   IKRNLPLMITIGVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVI-LSGG 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A        +   +GLS  L  P+  ++  A G  MGL     +     I 
Sbjct: 61  IDLSVGSVIAFTGVFLAKVIGDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIIT 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L     +      +                   ++ P    +  + +  
Sbjct: 121 -----------LAGMFFLRGVSYLVSEESIPINHPIYDTLSSLAWKIPGGGRLSAMGLLM 169

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + +         I    RT   N    I  N  +   +  +     +  + +S+    +A
Sbjct: 170 LAVV-----VIGIFLAHRTRFGNQVYAIGGNATSENLMGISTRSTTIRIYMLSTGLATLA 224

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  F+         +      +  I+ V++GG         +  +   +  L        
Sbjct: 225 GIVFSIYTQ-AGYALAGVGVELDAIASVVIGG------TLLSGGVGTVLGTLFGVAIQGL 277

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
             + + FD + +   T + +  L  + +     L
Sbjct: 278 IQTYINFDGTLSSWWTKIAIGILLFIFIALQRGL 311


>gi|91209403|ref|YP_539389.1| permease [Escherichia coli UTI89]
 gi|117622608|ref|YP_851521.1| ribose ABC transporter permease [Escherichia coli APEC O1]
 gi|218557253|ref|YP_002390166.1| permease component of sugar ABC transport system [Escherichia coli
           S88]
 gi|237707674|ref|ZP_04538155.1| sugar ABC transporter [Escherichia sp. 3_2_53FAA]
 gi|293408475|ref|ZP_06652314.1| conserved hypothetical protein [Escherichia coli B354]
 gi|301019965|ref|ZP_07184099.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 69-1]
 gi|331661700|ref|ZP_08362623.1| putative branched-chain amino acid transport system, permease
           component [Escherichia coli TA143]
 gi|331671887|ref|ZP_08372683.1| putative branched-chain amino acid transport system, permease
           component [Escherichia coli TA280]
 gi|91070977|gb|ABE05858.1| putative permease component of transport system, probably ribose
           specific [Escherichia coli UTI89]
 gi|115511732|gb|ABI99806.1| putative permease component of transport system, probable substrate
           ribose [Escherichia coli APEC O1]
 gi|218364022|emb|CAR01687.1| putative permease component of sugar ABC transport system
           [Escherichia coli S88]
 gi|226898884|gb|EEH85143.1| sugar ABC transporter [Escherichia sp. 3_2_53FAA]
 gi|291471653|gb|EFF14136.1| conserved hypothetical protein [Escherichia coli B354]
 gi|294490446|gb|ADE89202.1| ABC transporter, permease protein [Escherichia coli IHE3034]
 gi|300398995|gb|EFJ82533.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 69-1]
 gi|307628188|gb|ADN72492.1| putative permease of transport system probably ribose specific
           [Escherichia coli UM146]
 gi|315287692|gb|EFU47095.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 110-3]
 gi|323191452|gb|EFZ76714.1| branched-chain amino acid transport system / permease component
           family protein [Escherichia coli RN587/1]
 gi|323953045|gb|EGB48913.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H252]
 gi|323958758|gb|EGB54459.1| branched-chain amino acid transport system/permease component
           protein [Escherichia coli H263]
 gi|331060122|gb|EGI32086.1| putative branched-chain amino acid transport system, permease
           component [Escherichia coli TA143]
 gi|331070876|gb|EGI42235.1| putative branched-chain amino acid transport system, permease
           component [Escherichia coli TA280]
          Length = 323

 Score = 49.5 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 100/315 (31%), Gaps = 18/315 (5%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +++  L LL VV  + L        +   +  +     +  + A GL  VV   G + ++
Sbjct: 7   RHEFWLALLIVVLFVGLAWRSDEFLTFGNLYDLANNYAMLTILACGL-FVVLISGGIDIS 65

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIM 129
                 I  Y  V+L  + G +  +   ++  I    G+I  L   + R   + I     
Sbjct: 66  FPAMTIIAQYGMVLLLQKIGGNFAVAFALAGGIGILLGLINALLVNRLRVPSIIIT---- 121

Query: 130 SEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLG 189
                   I    I  G           +               +    Y+  +   L+ 
Sbjct: 122 --------ISTLNIFYGLLLWLSKGVWLYDFPPWFEQGVMLFKYTDADGYDYGLGLPLIA 173

Query: 190 MCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFF 249
           M  +       +  T++      +  N+++   +  +++  +L  +       G AG   
Sbjct: 174 MITVVLLTAFIMNFTSVGRKIYALGGNRESASRIGFSVLKLQLFVYGYMGLMSGAAGVVQ 233

Query: 250 AASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
           + +   ++PD     E  ++ ++V     +LGG  +L+       +L  +      +   
Sbjct: 234 SWTVMTVAPDSLLGYELTVLAAVVLGGTSLLGGRGTLTGTLLGVVLLAVMQNGLNLLGVS 293

Query: 305 YFNSLLKFDCSFNMR 319
            +   L         
Sbjct: 294 SYWQTLITGIIIVAS 308


>gi|13471118|ref|NP_102687.1| permease protein of sugar ABC transporter [Mesorhizobium loti
           MAFF303099]
 gi|14021862|dbj|BAB48473.1| permease protein of sugar ABC transporter [Mesorhizobium loti
           MAFF303099]
          Length = 373

 Score = 49.5 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 81/304 (26%), Gaps = 20/304 (6%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           +  L +V     F    A  +   I +         + A G ++++   G   L+     
Sbjct: 36  VAGLVLVTIFFFFTANPAMFTLAGIMNFMAPAAQLGILAIGAALLM-IGGEFDLSIGSMV 94

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A     +      + + + + I V+   +   G+     +++       +    +  +  
Sbjct: 95  AFAGLVFGTALVVWHVPLSVAILVAVAFAVFIGVTNAQITMRTGLPSFIVTLAFLFILRG 154

Query: 135 NILIKWKPITNG--------------KAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
             L+  K  + G                  + +   +    +  +         S     
Sbjct: 155 LTLVGLKWASGGSTQLRGMKEAAAGSPLAPFFSGDAFSSLFSWLAEKGIIEAFPSGAPKV 214

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
             +   +L    ++      L RT   N       + +A       +   K + F +++ 
Sbjct: 215 PGIPVEILWFIAIALLATWVLLRTRFGNWIFAAGGDPRAARKSAVPVARVKTTLFVITAL 274

Query: 241 FIGMAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVV 295
              +                    E   +I+ VI      GG  S       + +   V+
Sbjct: 275 CATLVAILTVLDAGSTDARRGFQKEFEAIIAAVIGGCLLTGGYGSAIGAFFGSIVFGMVL 334

Query: 296 ELCC 299
               
Sbjct: 335 IGLT 338


>gi|281414511|ref|ZP_06246253.1| ABC-type uncharacterized transport system, permease component
           [Micrococcus luteus NCTC 2665]
          Length = 398

 Score = 49.1 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 34/298 (11%), Positives = 88/298 (29%), Gaps = 7/298 (2%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +          ++ + G++I     GL ++     +  GA      G    L   + + +
Sbjct: 108 LTETLTVATPLIIISLGIAIAF-RAGLFNIGGQGQFIFGAMFATWFGVHLHLPPGVHLLL 166

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             ++    G++ G      +    A   ++   +    +     + N         R   
Sbjct: 167 VVVMGVLGGVLWGSVVGVLKAWTGAHEVILTIMLNYVAVNLLAYLLNTP-----VLRAPG 221

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               V + +         +  +  +++               ++R+ +    R +  N  
Sbjct: 222 TTNPVSAPLDRSAMFPRLLGTDFRLHWGFFVALLAVLFTWWLMQRSTLGFRLRAVGANPD 281

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  +   ++  + ++A A+S    G+AGA   A  +         S     I++ +L G 
Sbjct: 282 AARTAGISVKGSYVAAMAISGGLAGLAGATHVAGTESTLNTSVAGSFGFDAITVALL-GR 340

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
           +    +  A  +   +      M       +       ++    +    L   I    
Sbjct: 341 SHPVGVLFAGLLFGALRAGGVTMQTETGVPVDIVLVVQSVIVLLIAAPPLVRAIFRLP 398


>gi|239832236|ref|ZP_04680565.1| monosaccharide-transporting ATPase [Ochrobactrum intermedium LMG
           3301]
 gi|239824503|gb|EEQ96071.1| monosaccharide-transporting ATPase [Ochrobactrum intermedium LMG
           3301]
          Length = 382

 Score = 49.1 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 31/301 (10%), Positives = 77/301 (25%), Gaps = 20/301 (6%)

Query: 18  LAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
           L ++    + +   A  +   I +         + A   ++++   G   L+     A  
Sbjct: 48  LVLITIFFVSVANPAMFTAAGIMNFMAPASQLGILAVAAALLM-IGGEFDLSIGSMVAFA 106

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
              +      + + + + I V+ + +   G++     ++       +    +  +    L
Sbjct: 107 GLIFAAALVVWQVPLAVAIIVTLLFAAFVGVVNAQIVIRTGLPSFIVTLAFLFILRGLSL 166

Query: 138 IKWKPITNGKAGIYVA--------------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFM 183
           +  K  T G   +                    +       +         +       +
Sbjct: 167 VGLKWATGGATQLRGVKEAVAGSYLAGLFSGDAFQGVFAWMAENDLIAKFPNGEPSVRGV 226

Query: 184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIG 243
              +L    ++      L RT   N       +  A  +    +   K + F  ++    
Sbjct: 227 PVEVLWFIAIALIATYVLVRTRFGNWIFAAGGDALAARNSGVPVRRVKTTLFMCTAMAAA 286

Query: 244 MAGAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELC 298
           +                    E   +I+ VI      GG  S         I   V+   
Sbjct: 287 LVAILTVLDAGSTDARRGFQKEFEAIIAAVIGGCLLTGGYGSAIGAFFGAIIFGMVLIGL 346

Query: 299 C 299
            
Sbjct: 347 T 347


>gi|254488364|ref|ZP_05101569.1| inner-membrane translocator [Roseobacter sp. GAI101]
 gi|214045233|gb|EEB85871.1| inner-membrane translocator [Roseobacter sp. GAI101]
          Length = 333

 Score = 49.1 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 34/329 (10%), Positives = 94/329 (28%), Gaps = 32/329 (9%)

Query: 11  YDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNC 70
           +  I  +   V    L L   A    + +  +  Q     + A G++IV+   G + L+ 
Sbjct: 18  FILIELIFFSVAGEFLSLSDKAFMDWENMLLLLKQSAPIGIIAMGMTIVM-VNGNIDLSV 76

Query: 71  VIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMS 130
              +AI A   +   +    +                    +P               ++
Sbjct: 77  GATFAIAAIVLLDSLTWPIFAGLGD--------------WVIPVAWLLALTAGTVLGALN 122

Query: 131 EIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGM 190
                       I    + +     ++       +    +          + +      +
Sbjct: 123 GFIVWKTGVDAFIVTLGSMLGYRGIVFMFNGEQPTSHLNWTLVDFAEAEFLGLATASWFL 182

Query: 191 CFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFA 250
              +  +   + +T        I DN++A  +    +    +  FA+      ++   F 
Sbjct: 183 LACTFVLWFLMAKTVHGRNAYAIGDNREAAVNAGIRVGPHIMINFAIIGFLAALSAVVFY 242

Query: 251 ASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           +    ++P+  +  E  ++ ++V     I GG  S+         +  + +    +    
Sbjct: 243 SESGSVNPNDGQLYELWVITAVVLGGTKITGGAGSVIGTLGGVIAIQLLRKGLGHIG--- 299

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILM 334
                    +       ++ + L  V+++
Sbjct: 300 ---------ADTSTVNLVIGLILIAVLIL 319


>gi|182419160|ref|ZP_02950414.1| galactoside transport system permease protein MglC [Clostridium
           butyricum 5521]
 gi|237669236|ref|ZP_04529218.1| galactoside transport system permease protein MglC [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182377115|gb|EDT74685.1| galactoside transport system permease protein MglC [Clostridium
           butyricum 5521]
 gi|237655123|gb|EEP52681.1| galactoside transport system permease protein MglC [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 408

 Score = 49.1 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/315 (11%), Positives = 85/315 (26%), Gaps = 8/315 (2%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + +  +V  +++ +        +    +  Q    ++ A G+   +   G   L+     
Sbjct: 87  IIIALLVLVIIIMIIQPRFMQYEVALDILTQSSTKMIIALGICFTLLIAG-TDLSAGRMV 145

Query: 75  AIGAY--SYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
            + A   + ++  S Y    +  +P  A+I      I+          +L     +   I
Sbjct: 146 GLAAVISTSMLQTSDYANRFFPNMPQLAVIIPIVIGIIACMLFGVLNGFLVAKYDMHPFI 205

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
                                ++   +G      I   +     +     +  ++     
Sbjct: 206 ATLATQVIVYGACSLYFDMDPNKSQPIGGIRPDFIALGQTKLLQIGDFPGISILVPIAIV 265

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
               +   L +T        I  N++A       +    +  F  +S   G+ G   AA 
Sbjct: 266 FIILVWFILNKTVFGKNVYAIGGNREAAVVSGVNVFATIMGIFIFASLLYGVGGILEAAR 325

Query: 253 RDRISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
               +       E   + + V+      GG+  +S I     I   +      +      
Sbjct: 326 TAGATNQYGNGYELDAIAACVVGGVSLNGGVGKVSGIVSGVLIFTVIQYGLQFIAVSPMW 385

Query: 308 SLLKFDCSFNMRHTT 322
             +       +    
Sbjct: 386 QQVIKGIIIAVAVAI 400


>gi|84683879|ref|ZP_01011782.1| ABC transporter, permease protein [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84668622|gb|EAQ15089.1| ABC transporter, permease protein [Rhodobacterales bacterium
           HTCC2654]
          Length = 424

 Score = 49.1 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 98/324 (30%), Gaps = 12/324 (3%)

Query: 9   NKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVM-FAWG--LSIVVGSLGL 65
            K+  +   + +   ++ FL          +  M    ++  +  A G    ++   + +
Sbjct: 94  AKWTNLSLGIGLAILVMAFLVWATAGKSFSLTGMLQATMVRAVPIALGGLAGVLSERVAV 153

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           +++        GA++  ++GS  G   W+ +  + ++ G  GM++    + +R D +   
Sbjct: 154 VNIAIEGMLLAGAFTGALIGSLLG--GWVGMFAAILVGGGFGMLLAALVVTYRMDQIIAG 211

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            +I   +          + +    +  A         +   I             ++   
Sbjct: 212 VVINLFVLGVTSYVSSQVFSEYRHLNNAPTFRAFKIPLLGDIPVIGPMLFNQNLFVYGAL 271

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           +L+ +             T      R + ++ +A  +L   +   +     +     G  
Sbjct: 272 ILVAISTYYLF------HTKNGLRARAVGEHPRAADTLGVDVYRTRYIHVTLGGMVAGFG 325

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           GA+F         +        I ++ +I  G         A  I      +   +    
Sbjct: 326 GAWFTLGSVGRFDENMTNGRGYIGLAAMIF-GRWHPVGALSAALIFGFADSIQQKLALLN 384

Query: 306 FNSLLKFDCSFNMRHTTLMVIALF 329
                +F        T ++V  L 
Sbjct: 385 TPIPSEFLAMAPYIATIIVVAGLI 408


>gi|157163705|ref|YP_001461023.1| inner membrane ABC transporter permease protein YjfF [Escherichia
           coli HS]
 gi|157069385|gb|ABV08640.1| putative sugar ABC transporter, permease protein [Escherichia coli
           HS]
          Length = 331

 Score = 49.1 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 44/334 (13%), Positives = 97/334 (29%), Gaps = 24/334 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++ N    I   + V+             S + I ++        + A G++ V+   G 
Sbjct: 2   IKRNLPLMITIGVFVLGYFYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVI-LSGG 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A        +   +GLS  L  P+  ++  A G  MGL     +     I 
Sbjct: 61  IDLSVGSVIAFTGVFLAKVVGDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIIT 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L     +      +                   ++ P    +  + +  
Sbjct: 121 -----------LAGMFFLRGVSYLVSEESIPINHPIYDTLSSLAWKIPGGGRLSAMGLLM 169

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + +         I    RT   N    I  N  +   +  +     +  + +S+    +A
Sbjct: 170 LAVV-----VIGIFLAHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLA 224

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  F+         +      +  I+ V++GG         +  +   +  L        
Sbjct: 225 GIVFSIYTQ-AGYALAGVGVELDAIASVVIGG------TLLSGGVGTVLGTLFGVAIQGL 277

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
             + + FD + +   T + +  L  + +     L
Sbjct: 278 IQTYINFDGTLSSWWTKIAIGILLFIFIALQRGL 311


>gi|297571818|ref|YP_003697592.1| inner-membrane translocator [Arcanobacterium haemolyticum DSM
           20595]
 gi|296932165|gb|ADH92973.1| inner-membrane translocator [Arcanobacterium haemolyticum DSM
           20595]
          Length = 444

 Score = 49.1 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 45/325 (13%), Positives = 113/325 (34%), Gaps = 10/325 (3%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYV--MFAWGLSIVVGSLGL 65
           L+    I+  +  ++  LL    G+  +     ++GI + I    +F     +V   +G+
Sbjct: 112 LDFVATIVVAVLTIFGFLLLAGGGSAGAITLTSTLGITVAISTPLIFGALSGVVCEHVGV 171

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           +++       +GA+   ++ + +  + ++ +  + +     G ++ L S+K+      + 
Sbjct: 172 VNIAIEGQLLVGAFV-GVMAASFFKTPYVGLLAAPLAGAFVGSLLALFSVKY-----GVD 225

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF-MY 184
            +I+  +   + +       G      A  L     ++  +   F      +   +F   
Sbjct: 226 QIIVGVVLNVLCLGLTTFFYGTLMSENAASLNTNQYSLPIMRIPFLADIPVIGPMLFNQT 285

Query: 185 YVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGM 244
            ++  M    A + ++L R+      R   ++ +A  ++   +   ++      SA  G+
Sbjct: 286 ILVYIMYVAVALLTIFLYRSRWGLRMRACGEHPRAADTVGINVNRTRIRNTIFGSAIAGL 345

Query: 245 AGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFY 304
            GAFF   +     D        I ++ +IL G         A  +      +   M   
Sbjct: 346 GGAFFTIGQGLAFTDNMSAGNGYIALAAMIL-GKWHPIGALGAAGMFGFAKAVALLMPNL 404

Query: 305 YFNSLLKFDCSFNMRHTTLMVIALF 329
           +     +         T + V    
Sbjct: 405 HGGIPSQLVNMIPYIITVIAVAGFV 429


>gi|256019883|ref|ZP_05433748.1| inner membrane ABC transporter permease protein YjfF [Shigella sp.
           D9]
 gi|300906075|ref|ZP_07123796.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 84-1]
 gi|301302659|ref|ZP_07208789.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 124-1]
 gi|307312993|ref|ZP_07592621.1| inner-membrane translocator [Escherichia coli W]
 gi|309792869|ref|ZP_07687297.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 145-7]
 gi|312965911|ref|ZP_07780137.1| inner membrane ABC transporter permease protein yjfF [Escherichia
           coli 2362-75]
 gi|332281022|ref|ZP_08393435.1| membrane component of ABC superfamily [Shigella sp. D9]
 gi|300402114|gb|EFJ85652.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 84-1]
 gi|300842184|gb|EFK69944.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 124-1]
 gi|306907161|gb|EFN37668.1| inner-membrane translocator [Escherichia coli W]
 gi|308123155|gb|EFO60417.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 145-7]
 gi|312289154|gb|EFR17048.1| inner membrane ABC transporter permease protein yjfF [Escherichia
           coli 2362-75]
 gi|315063542|gb|ADT77869.1| predicted sugar transporter subunit: membrane component of ABC
           superfamily [Escherichia coli W]
 gi|315255586|gb|EFU35554.1| amino acid or sugar ABC transport system, permease protein
           [Escherichia coli MS 85-1]
 gi|320175810|gb|EFW50894.1| putative sugar ABC transport system, permease protein YjfF
           [Shigella dysenteriae CDC 74-1112]
 gi|320185325|gb|EFW60097.1| Putative sugar ABC transport system, permease protein YjfF
           [Shigella flexneri CDC 796-83]
 gi|323380379|gb|ADX52647.1| inner-membrane translocator [Escherichia coli KO11]
 gi|332087164|gb|EGI92298.1| inner membrane ABC transporter permease protein yjfF [Shigella
           boydii 3594-74]
 gi|332103374|gb|EGJ06720.1| membrane component of ABC superfamily [Shigella sp. D9]
          Length = 331

 Score = 49.1 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 44/334 (13%), Positives = 97/334 (29%), Gaps = 24/334 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++ N    I   + V+             S + I ++        + A G++ V+   G 
Sbjct: 2   IKRNLPLMITIGVFVLGYFYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVI-LSGG 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A        +   +GLS  L  P+  ++  A G  MGL     +     I 
Sbjct: 61  IDLSVGSVIAFTGVFLAKVVGDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIIT 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L     +      +                   ++ P    +  + +  
Sbjct: 121 -----------LAGMFFLRGVSYLVSEESIPINHPIYDTLSSLAWKIPGGGRLSAMGLLM 169

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + +         I    RT   N    I  N  +   +  +     +  + +S+    +A
Sbjct: 170 LAVV-----VIGIFLAHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLA 224

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  F+         +      +  I+ V++GG         +  +   +  L        
Sbjct: 225 GIVFSIYTQ-AGYALAGVGVELDAIASVVIGG------TLLSGGVGTVLGTLFGVAIQGL 277

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
             + + FD + +   T + +  L  + +     L
Sbjct: 278 IQTYINFDGTLSSWWTKIAIGILLFIFIALQRGL 311


>gi|253999650|ref|YP_003051713.1| inner-membrane translocator [Methylovorus sp. SIP3-4]
 gi|253986329|gb|ACT51186.1| inner-membrane translocator [Methylovorus sp. SIP3-4]
          Length = 293

 Score = 49.1 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 90/305 (29%), Gaps = 24/305 (7%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           +    +  ++Y + A G  ++  + G+ +          A ++ +     G+  WL   +
Sbjct: 8   LLGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGSMVLFAALTF-VSLLERGIPFWLTFAI 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
           + +        +    L+   +   I   + +     ++        G            
Sbjct: 67  TLLTMVVLAWAIERFMLRKLVNRPPITLFMATLGLSYMIEGLAQAVWGAQVH-------- 118

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
               +   I         ++   F  +       L   +     +T    + R + D+Q 
Sbjct: 119 ---GLELGISDEPLELGGMLLSQFDIFAAGVAGVLVIFLSWLFNKTRTGISLRAVADDQL 175

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
           A  ++   +    L  +AV+     +AG  + A               +  + ++I+GG 
Sbjct: 176 AALAVGIKLQRIWLIVWAVAGFVGLVAGLLWGARLGVQFSLS---LVVLKALPVLIIGGF 232

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
           TS+        I+    +L            ++              +   + +L+R   
Sbjct: 233 TSIGGAIVGGLIIGASEKLAEVFIGPIIGGGIENWFP---------YVLALVFLLVRPAG 283

Query: 339 LLRLR 343
           +   R
Sbjct: 284 IFGER 288


>gi|238892884|ref|YP_002917618.1| ribose high-affinity ABC transport system permease component
           [Klebsiella pneumoniae NTUH-K2044]
 gi|238545200|dbj|BAH61551.1| ribose high-affinity ABC transport system permease component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 323

 Score = 49.1 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 43/317 (13%), Positives = 100/317 (31%), Gaps = 18/317 (5%)

Query: 8   LNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLS 67
           L +++  L +  +   LLL        +   +  +     +  + A GL  VV   G + 
Sbjct: 5   LKRHEFWLGMFIIALCLLLGWRSEEFFTFGNLYDLANNYAMLTILACGL-FVVLIAGGID 63

Query: 68  LNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATL 127
           ++      I  Y  V++  + G +  +   ++  I    G++  L   + R   + I   
Sbjct: 64  ISFPAMTIIAQYGMVVMLQKVGGNFAVAFVLAGGIGVLLGLVNALLVNRLRVPSIIIT-- 121

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
                     I    I  G           +               +    Y+  +   L
Sbjct: 122 ----------ISTLNIFYGLLLWLSKGVWLYDFPPWFEKGVMLFKYTDADGYDYGLGLPL 171

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           L M  +       +  T +      +  N+++   +  +++  +L  +       G AG 
Sbjct: 172 LTMIAVVLLTAFIMNFTTVGRKIYAMGGNRESASRVGFSVLRLQLFVYGYMGLMSGAAGV 231

Query: 248 FFAASRDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMN 302
             A +   ++PD     E  ++ ++V     ++GG  +L+       +L  +      + 
Sbjct: 232 VQAWTVMTVAPDSLLGYELTVLAAVVLGGTSLIGGRGTLTGTLLGVILLAVMQNGLNLLG 291

Query: 303 FYYFNSLLKFDCSFNMR 319
              +   L       + 
Sbjct: 292 VSSYWQTLITGAIIVVS 308


>gi|16264701|ref|NP_437493.1| putative sugar uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|307303449|ref|ZP_07583203.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
 gi|15140839|emb|CAC49353.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|306902840|gb|EFN33432.1| inner-membrane translocator [Sinorhizobium meliloti BL225C]
          Length = 320

 Score = 49.1 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 34/323 (10%), Positives = 94/323 (29%), Gaps = 29/323 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +R  K    + L  V+  ++   F     +     ++  Q+ +  + A+G++ V+  LG 
Sbjct: 12  VRALKQYGGIFLSLVMLCIVFSFFNPRFMTVVNFMNILQQVAVVAIAAFGMTWVI-LLGE 70

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A+         +        +    A  +    +   L +      ++   
Sbjct: 71  IDLSVGSIIAVAGMVGAQCFAFGMGFAPAIALTLAAGALMGMLNGVLTAKLLLPSFIVTV 130

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                                         +        ++I    + +      + +  
Sbjct: 131 ---------------------ATMGIYRGMVSLPTNGAPAMIENETWTAIGTESFLGLPI 169

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           ++  +  L     + L +T+          N++A       +   K+  F +S     ++
Sbjct: 170 IIWVVAVLFVINQIVLSKTSFGRRAYLTGGNREAAVYSGIKVDRLKILIFMISGVMAAIS 229

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVIL------GGMTSLSKIAKATAILIGVVELCC 299
           G   ++       +    S  +  I+  +L      GG+ ++        I+  +     
Sbjct: 230 GVLLSSRLFSAQTNA-GMSYELDAIAAAVLGGTSLAGGVGTMVGTLIGALIIGVMNNGMN 288

Query: 300 GMNFYYFNSLLKFDCSFNMRHTT 322
            ++  YF  L+       +    
Sbjct: 289 MLSVPYFYQLIVKGLVILVAVWL 311


>gi|332968367|gb|EGK07436.1| L-arabinose ABC superfamily ATP binding cassette transporter,
           permease protein [Desmospora sp. 8437]
          Length = 407

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/350 (10%), Positives = 94/350 (26%), Gaps = 55/350 (15%)

Query: 10  KYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLN 69
           +   ++  L  +  L   L  G   +   + ++ +Q    ++ A G+ +V+   G + L+
Sbjct: 13  RQYGMIVALLFIVILFQILTSGVLLNPLNVTNLILQNSYILVLAIGMVMVI-ITGHIDLS 71

Query: 70  CVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAI--ATL 127
                A       IL  ++ L   L   +  ++    G   G      R     +  A +
Sbjct: 72  VGSVAAFIGAMAAILMVQFNLHPLLAGILCLLLGALIGAWQGFWVAYIRIPAFIVTLAGM 131

Query: 128 IMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMY--- 184
           ++      I ++ + I             +                +   +  +F+Y   
Sbjct: 132 LLFRGLTMIALQGQSIAPFPDAFKQISSGFIPDFADGGNFHLLSLITGLGLSLLFVYTEV 191

Query: 185 -----------------YVLLGMCFLSASIILW--------------------------- 200
                            + +  +  +   + L+                           
Sbjct: 192 KNRKKEQSYDFTVSPTPFFITKVIGMVVIVTLFSYLLATYKGIPNILLLMLVLIVGYSFM 251

Query: 201 LRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDM 260
           +++T I      +  N+KA               F        ++G  FAA  +  +P  
Sbjct: 252 MKKTVIGRHIYAVGGNEKAAELSGIKTKRVTFWVFVNMGVLSALSGLIFAARLNAATPKA 311

Query: 261 FKFSE-----NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
               E        +      GG+ ++        ++  +      +    
Sbjct: 312 GNLFELDAIAAAFIGGASAYGGIGTVVGAIIGGLVMGVMNNGMSIIGLGV 361


>gi|330717972|ref|ZP_08312572.1| ABC-type uncharacterized transport system, permease component
           [Leuconostoc fallax KCTC 3537]
          Length = 371

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 85/310 (27%), Gaps = 1/310 (0%)

Query: 26  LFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILG 85
           + L   A  S + I  +  Q+   ++ A G + V  S G  ++        G    V   
Sbjct: 40  IALMSSAVGSMQNIGGVLTQMTPLILTALGFT-VASSAGFFNIGLSGQALAGWVGAVWYA 98

Query: 86  SRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITN 145
             +      ++  SA+I G     +      +       + +I++ +   IL+       
Sbjct: 99  LSFPNLPAYVMIPSALILGTVLGGIAGAIPGWLRAQFGASEVIVTIMMNYILLYTGNNIL 158

Query: 146 GKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTA 205
                +           + +         + +     +   ++    +   I   +++T 
Sbjct: 159 QNVMAHGIKESAQTTKQIGANATLQMPWLTQLTQGSSVSAGIVLALVMIVVIWFVMKKTT 218

Query: 206 ISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSE 265
           +    R +  N  +            + A A+S    G+AG        +          
Sbjct: 219 LGFEIRAVGLNPDSARYAGMPSKRTAVVAMAISGGLAGLAGTIEGLGNYQYFFTQNSSPS 278

Query: 266 NIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMV 325
                  V L G  S   +  A  +   +     GM           D         +  
Sbjct: 279 IGFDGMAVALLGNGSYLGVLAAAILFSVLKIGGLGMPMSTGVPFELVDIVIASIIFFVGA 338

Query: 326 IALFLVILMR 335
             L  +I  R
Sbjct: 339 NYLIRIIQKR 348


>gi|307140925|ref|ZP_07500281.1| inner membrane ABC transporter permease protein YjfF [Escherichia
           coli H736]
 gi|331644980|ref|ZP_08346097.1| inner membrane ABC transporter permease protein YjfF [Escherichia
           coli H736]
 gi|284924405|emb|CBG37529.1| ABC transporter, permease protein [Escherichia coli 042]
 gi|331035955|gb|EGI08193.1| inner membrane ABC transporter permease protein YjfF [Escherichia
           coli H736]
 gi|332346310|gb|AEE59644.1| inner membrane ABC transporter permease YjfF [Escherichia coli
           UMNK88]
          Length = 331

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 98/334 (29%), Gaps = 24/334 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++ N    I   + V+  L          S + I ++        + A G++ V+   G 
Sbjct: 2   IKRNLPLMITIGVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVI-LSGG 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A        +   +GLS  L  P+  ++  A G  MGL     +     I 
Sbjct: 61  IDLSVGSVIAFTGVFLAKVVGDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIIT 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L     +      +                   ++ P    +  + +  
Sbjct: 121 -----------LAGMFFLRGVSYLVSEESIPINHPIYDTLSSLAWKIPGGGRLSAMGLLM 169

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + +         I    RT   N    I  N  +   +  +     +  + +S+    +A
Sbjct: 170 LAVV-----VIGIFLAHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLA 224

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  F+         +      +  I+ V++GG         +  +   +  L        
Sbjct: 225 GIVFSIYTQ-AGYALAGVGVELDAIASVVIGG------TLLSGGVGTVLGTLFGVAIQGL 277

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
             + + FD + +   T + +  L  + +     L
Sbjct: 278 IQTYINFDGTLSSWWTKIAIGILLFIFIALQRGL 311


>gi|260428334|ref|ZP_05782313.1| inner-membrane translocator [Citreicella sp. SE45]
 gi|260422826|gb|EEX16077.1| inner-membrane translocator [Citreicella sp. SE45]
          Length = 343

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/344 (13%), Positives = 99/344 (28%), Gaps = 52/344 (15%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS------------------ 80
           I +   +   Y + A GL+++ G+LG+++      + IGA+                   
Sbjct: 8   ILNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFCAVTLNRLLTLSHQVVDET 67

Query: 81  ---------------------YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
                                     +    S+ L I  S  +    G++M    +K   
Sbjct: 68  RTDFLGNPLKVDIPYVQDLFGEAAGATIIDWSVPLAILFSIPVMIIIGVVMERGLIKHFY 127

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
                  ++++     +L +      G   I       F G+          F  + +IY
Sbjct: 128 KRPHADQILVTFGLAIVLQEIIKQLFGANPIPTPAPEVFRGS--LDFGVMLGFDPNAIIY 185

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
             +          +  ++  +L+ T      R    +++    L   I       F +++
Sbjct: 186 PYWRLVYFAFAAIIIGAVFAFLQFTTFGMVVRAGMADRETVGLLGINIDRRFTIMFGLAA 245

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  G+AG  +A            F     V+ +V    M SL     A  +L  +     
Sbjct: 246 AVAGLAGVMYAPINSPNYHMGMDFLVLSFVVVVVGG--MGSLPGAVLAGFLLGILESFAS 303

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                     +     + +    L+          R   L+  +
Sbjct: 304 MNEIKAILPGIDQIIIYLVAIIILLT---------RPRGLMGRK 338


>gi|170732742|ref|YP_001764689.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
 gi|169815984|gb|ACA90567.1| inner-membrane translocator [Burkholderia cenocepacia MC0-3]
          Length = 311

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 101/312 (32%), Gaps = 22/312 (7%)

Query: 41  SMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSA 100
           +     L+  M + GL+++    G+L+      Y +GAY    + +      W  + ++ 
Sbjct: 10  NGLSYGLLLFMLSAGLTLIFSVQGVLNFAHASFYMLGAYVGYSIAA--WAGFWPALLLAP 67

Query: 101 MISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLG 160
           +  G  G       L+        + L+++     ++ +   +  G A +       F G
Sbjct: 68  LAVGLLGAGCERALLRRVQARGHTSELLLTFGLAYLIGEGAKLAWGLAPLPAPVPPLFDG 127

Query: 161 TTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAF 220
             V             +    +  +++     +  ++ + LR + I    R    ++ A 
Sbjct: 128 APVT---------VFGLALPRYRLFMMAMSTTMLVALGVLLRASRIGLVVRAALTHRAAV 178

Query: 221 FSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTS 280
            +L   +     + F   +A   +AG   A     +       +   +V ++V++GG+ S
Sbjct: 179 EALGYDVPRVMTALFGAGTALAALAGVIGAPLA--VIEPALAETVGSVVFAVVVIGGLGS 236

Query: 281 LSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILM------ 334
           L     A+  +          +    +       +       + +  L  ++        
Sbjct: 237 LGGAFVASLAVGFAQTFAAASDTSLRDLAQWTGIALPDSVAAVSIAQLAPLVPYLLLVVV 296

Query: 335 ---RSHSLLRLR 343
              R   L   R
Sbjct: 297 LVARPRGLFGER 308


>gi|333010257|gb|EGK29690.1| inner membrane ABC transporter permease protein yjfF [Shigella
           flexneri VA-6]
 gi|333011218|gb|EGK30632.1| inner membrane ABC transporter permease protein yjfF [Shigella
           flexneri K-272]
 gi|333012108|gb|EGK31490.1| inner membrane ABC transporter permease protein yjfF [Shigella
           flexneri K-227]
          Length = 331

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 98/334 (29%), Gaps = 24/334 (7%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           ++ N    I   + V+  L          S + I ++        + A G++ V+   G 
Sbjct: 2   IKRNLPLMITIGVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVI-LSGG 60

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A        +   +GLS  L  P+  ++  A G  MGL     +     I 
Sbjct: 61  IDLSVGSVIAFTGVFLAKVVGDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIIT 120

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
                      L     +      +                   ++ P    +  + +  
Sbjct: 121 -----------LAGMFFLRGVSYLVSEESIPINHPIYDTLSSLAWKIPGGGRLSAMGLLM 169

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
           + +         I    RT   N    I  N  +   +  +     +  + +S+    +A
Sbjct: 170 LAVV-----VIGIFLAHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLA 224

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYY 305
           G  F+         +      +  I+ V++GG         +  +   +  L        
Sbjct: 225 GIVFSIYTQ-AGYALAGVGVELDAIASVVIGG------TLLSGGVGTVLGTLFGVAIQGL 277

Query: 306 FNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSL 339
             + + FD + +   T + +  L  + +     L
Sbjct: 278 IQTYINFDGTLSSWWTKIAIGILLFIFIALQRGL 311


>gi|325264416|ref|ZP_08131147.1| ribose ABC transporter, permease protein [Clostridium sp. D5]
 gi|324030487|gb|EGB91771.1| ribose ABC transporter, permease protein [Clostridium sp. D5]
          Length = 324

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/298 (9%), Positives = 83/298 (27%), Gaps = 27/298 (9%)

Query: 31  GATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGL 90
                   + ++   + +  + A G++ VV   G + L+      + A S  I+  +   
Sbjct: 40  PNFLRPANMVNVVRSVSLNGIIAMGMTFVV-LTGGVDLSVGSTVGVVAVSAAIMMQKGIN 98

Query: 91  SIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGI 150
              ++   ++++ G    ++    +        I TL      + +              
Sbjct: 99  --PVVTVAASLLIGVVLGLINGIGVTVGKLAPFIMTLGTMTALRGVA------------- 143

Query: 151 YVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAW 210
                          +   F    S +   + +Y  L         +    + T    + 
Sbjct: 144 RYIANGSPQNWRDSGIDFSFLGQGSILGVPVPVYIFLAVFAVAFYVL----KYTEFGRSV 199

Query: 211 RTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVI 270
             + D+++A           +   F ++     ++   F +    I          +  +
Sbjct: 200 YALGDSREAARLCGINTKKVETLCFVITGFLSALSAIIFISRLG-IGQPEAGEGYELDAL 258

Query: 271 SIVIL------GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           ++V +      GG  S++       ++  +  +   M    F   +       +    
Sbjct: 259 AMVYIGGASTAGGSGSVAGTLIGACLISVINNILNLMGISPFIQKVIQGVIIILAVLL 316


>gi|271498652|ref|YP_003331677.1| inner-membrane translocator [Dickeya dadantii Ech586]
 gi|270342207|gb|ACZ74972.1| inner-membrane translocator [Dickeya dadantii Ech586]
          Length = 394

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/355 (14%), Positives = 105/355 (29%), Gaps = 47/355 (13%)

Query: 14  ILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIA 73
           ++  +  +      +  GA  S + I ++  Q  I  + A G+  V+ S   + L+    
Sbjct: 33  MIAAIIAIMLFFTVMTEGAYLSARNISNLLRQTAITGILAVGMVFVIISA-EIDLSVGSM 91

Query: 74  YAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLA---------- 123
             +      IL   YG  + L + V+ ++    G   G      R               
Sbjct: 92  MGLLGGVAAILDVWYGWPLPLTVAVTLLLGLLLGAWNGWWVAYRRVPSFIVTLAGMLAFR 151

Query: 124 -------------IATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFF 170
                          +  MS+I Q+ L        G  G+ +     +     R  +   
Sbjct: 152 GVLIGITNGTTVSPTSPAMSQIGQSYLPDGVGFLFGVVGLMLFVAWRWRQRWRRQHLGLP 211

Query: 171 RFPSSFVIYEIFMYYV------------------LLGMCFLSASIILWLRRTAISNAWRT 212
              +S  +    +  V                  +L +  +    +    RTA       
Sbjct: 212 VASASGDVTRQSLMAVLVLGAIYLLNDYRGVPTPVLLLTLIMLGGMFMALRTAFGRRIYA 271

Query: 213 IRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISI 272
           +  N  A       +   KL  FA++   + +AG   ++     SP     +E   + + 
Sbjct: 272 VGGNIDAARLSGVNVERTKLVVFAINGLMVAVAGLVLSSRLGAGSPSAGNIAELDAIAAC 331

Query: 273 VI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTT 322
           VI      GG+ S++       I+  +      ++   F   +       +    
Sbjct: 332 VIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMLDVPTFWQYIVKGGILLLAVWM 386


>gi|239833349|ref|ZP_04681677.1| monosaccharide-transporting ATPase [Ochrobactrum intermedium LMG
           3301]
 gi|239821412|gb|EEQ92981.1| monosaccharide-transporting ATPase [Ochrobactrum intermedium LMG
           3301]
          Length = 330

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 94/315 (29%), Gaps = 13/315 (4%)

Query: 13  KILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVI 72
            I+  +     +++ L   A  S   I  +    ++  + A G+ +V+   G + ++   
Sbjct: 14  FIIACVLFAAMVIIGLINPAFWSLDNIFGLLRSNVVIGIMALGVLLVM-ISGGIDVSFTA 72

Query: 73  AYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEI 132
                 Y  V      G     +  V+A + G          +        I TL    I
Sbjct: 73  FAIAAMYLTVRAMVYLGYDGVFIPFVAATLIGLLLGAFNGLIIHRFKMIPLIVTLGTGSI 132

Query: 133 FQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCF 192
            + +++       G  G  + +        +          +S       +  + L    
Sbjct: 133 VRGLVL-------GLVGTSIVNINKMPKELIAFGKTDVISLTSASGTAFGLTAMFLVYLA 185

Query: 193 LSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAAS 252
           L+  I L L  T I  +      + +A   +           + V+ A  G AG   ++ 
Sbjct: 186 LALLIHLILNYTMIGRSVYAYGGSPEAAKRVGFNTRRTIFFVYCVAGALAGFAGLLHSSM 245

Query: 253 RDRISPDMFKFSENIIVISIV-----ILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
               +P  F   E  ++ ++V     I GG  ++        +L+ V      M      
Sbjct: 246 IWLANPRDFVGLELDVIAAVVLGGASIFGGRGTVLGTLMGVFMLVMVKNSLIIMKVDTTW 305

Query: 308 SLLKFDCSFNMRHTT 322
             +       +    
Sbjct: 306 QRVVVGLIIIVATAI 320


>gi|226944302|ref|YP_002799375.1| inner-membrane translocator [Azotobacter vinelandii DJ]
 gi|226719229|gb|ACO78400.1| Bacterial inner-membrane translocator protein [Azotobacter
           vinelandii DJ]
          Length = 308

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/322 (11%), Positives = 91/322 (28%), Gaps = 27/322 (8%)

Query: 6   LRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGL 65
           +RL      L L+ V+  L+L L      + +    +  Q  I  + A G++ VV     
Sbjct: 1   MRLALDRFGLPLVFVLLCLILSLSSEYFMTWRNWMDILRQTSINGILAIGMTYVV-ITRG 59

Query: 66  LSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIA 125
           + L+     A       ++ ++    +  L       +    +   + +      ++A  
Sbjct: 60  IDLSVGSILAFAGLCSAMVAAQDHGLLASLSAGMFAGAALGAVNGFMVANLSIPPFVATL 119

Query: 126 TLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYY 185
            ++        ++                                 + +  +     +  
Sbjct: 120 GMLSIARGMTFILN---------------------DGSPITELPESYLALGIGSLGPVSM 158

Query: 186 VLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMA 245
            ++    ++    L L+ T        +  N+K+  +    +     S + VS    G+A
Sbjct: 159 PIVIFAIVALFFALVLKYTTYGRYVYAVGGNEKSARTSGIGVRKVMFSVYIVSGVLAGLA 218

Query: 246 GAFFAASRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCG 300
           G    A      P      E   + ++VI      GG  ++        ++  +      
Sbjct: 219 GMVLTARTTAALPQAGMSYELDAIAAVVIGGTSLSGGSGNIVGTLFGALLIGVINNGLNL 278

Query: 301 MNFYYFNSLLKFDCSFNMRHTT 322
           +    +   +       +    
Sbjct: 279 LGVSSYYQQVAKGLIIVIAVLV 300


>gi|257452897|ref|ZP_05618196.1| ABC transporter integral membrane protein [Fusobacterium sp.
           3_1_5R]
 gi|257466722|ref|ZP_05631033.1| ABC transporter integral membrane protein [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917874|ref|ZP_07914114.1| ABC transporter integral membrane protein [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|317059439|ref|ZP_07923924.1| ABC transporter integral membrane protein [Fusobacterium sp.
           3_1_5R]
 gi|313685115|gb|EFS21950.1| ABC transporter integral membrane protein [Fusobacterium sp.
           3_1_5R]
 gi|313691749|gb|EFS28584.1| ABC transporter integral membrane protein [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 363

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/327 (13%), Positives = 108/327 (33%), Gaps = 12/327 (3%)

Query: 19  AVVYPLLLFLFLGATKSQKYIDS-MGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIG 77
            +++ L++F F  +  S  YI + M +++   +     L I + +   L+   V   A+G
Sbjct: 16  ILMFALVVFAFPLSGLSLSYIANEMLLRMSRNLFLVLSLLIPIIAGMGLNFGIV-LGAMG 74

Query: 78  AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNIL 137
               +I  S + +     + ++ ++S    M++G               +    +   I 
Sbjct: 75  GQLALIFVSDWHIVGVQGVLLAMILSIPFSMVLGYIGGAVLNRAKGREMITSMILGYFIN 134

Query: 138 IKWKPITNGKAGIYVA----------DRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVL 187
             ++ I     G+ +            R       +  L        SF I  I +  + 
Sbjct: 135 GVYQLIVLYAMGVVIPLTDSKILLSSGRGVRNTIDLGKLNAALDKFVSFKIMNIEIPVLT 194

Query: 188 LGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGA 247
           +         I+W R T +    R I  + +   S    +   ++ A  +S+   G+   
Sbjct: 195 ILFIVALCIFIVWFRSTKLGQDMRAIGQDMEVARSSGIEVDKTRIIAIVISTVLAGIGQV 254

Query: 248 FFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFN 307
            +  +   ++         +  I+ +++GG +            + +  L   +      
Sbjct: 255 IYLQNIGTMNTYNSHEQIGMFSIAALLIGGASVAKASIPNALGGVVLFHLMFVLAPRAGK 314

Query: 308 SLLKFDCSFNMRHTTLMVIALFLVILM 334
            L+            +    + LV++M
Sbjct: 315 ELMGSAQIGEYFRVFVSYGIIALVLIM 341


>gi|114766074|ref|ZP_01445083.1| branched-chain amino acid ABC transporter, permease protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114541629|gb|EAU44670.1| branched-chain amino acid ABC transporter, permease protein
           [Roseovarius sp. HTCC2601]
          Length = 343

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/344 (14%), Positives = 100/344 (29%), Gaps = 52/344 (15%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYS------------------ 80
           I +   +   Y + A GL+++ G+LG+++      + IGA+                   
Sbjct: 8   ILNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFCAVTLNRLLTLSHQVVDET 67

Query: 81  ---------------------YVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRG 119
                                     +    S+ L I  S  I    G+IM    +K   
Sbjct: 68  RTDFLGNPLKVDVPYMQDIFGEATGAAIIDWSVPLAILFSIPIMIGFGVIMERGLIKHFY 127

Query: 120 DYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIY 179
                  ++++     +L +      G   I       F G+     +    F  + +IY
Sbjct: 128 KRPHADQILVTFGLAIVLQEVIKQIFGANPIPTPAPDVFRGSFDFGTM--LGFDPNVIIY 185

Query: 180 EIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSS 239
             +          +  ++  +L+ T      R    +++    L   I       F +++
Sbjct: 186 PYWRLVYFGFAAIIIGAVFAFLQFTTFGMVVRAGMADRETVGLLGINIDRRFTIMFGLAA 245

Query: 240 AFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCC 299
           A  G+AG  +A            F     V+ +V    M SL     A  +L  +     
Sbjct: 246 AVAGLAGVMYAPINSPNYHMGMDFLVLSFVVVVVGG--MGSLPGAVLAGFLLGILESFAS 303

Query: 300 GMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHSLLRLR 343
                     +     + +    L+          R   L+  +
Sbjct: 304 MNQIKSILPGIDQIIIYLVAIIILLT---------RPRGLMGRK 338


>gi|297156318|gb|ADI06030.1| ABC transporter sugar permease [Streptomyces bingchenggensis BCW-1]
          Length = 340

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 87/313 (27%), Gaps = 13/313 (4%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             + A+   +   +   +        ++        + A  +++++   G   L+  +  
Sbjct: 24  AIVGAIAVFVFFSVVADSFLQWSSFSTVLYAASTIGIMATPVALLM-IGGEFDLSTGVMV 82

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
              A    +   +   ++W  I VS + + A G   G   ++       I       +  
Sbjct: 83  TSSALISSMFSYQMTANVWAGIGVSLLATLAIGFFNGFLLVRTGLPSFIITLGTFLILQG 142

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             L            I        +            F S   I ++ +   +L    L 
Sbjct: 143 CNL-------GFTKLISETVSTKTIADMEGFPEAHKVFASHLTIGDVDLQVTVLWWLGLV 195

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
           A     L RT   N    +   ++A  ++   +   K+  +   +    ++G     + D
Sbjct: 196 ALATWILLRTRAGNWIFAVGGAKEAARAVGVPVNRTKIGLYMGVAFAAWISGQHLLFNYD 255

Query: 255 RISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +       +E + +I+ VI      GG  S    A    I     +      +      
Sbjct: 256 VVQSGEGVGNEFLYIIAAVIGGCLLTGGYGSAIGAAVGAFIFGMANKGIVYAQWSADWFK 315

Query: 310 LKFDCSFNMRHTT 322
                   +    
Sbjct: 316 FFLGAMLLLATML 328


>gi|218660091|ref|ZP_03516021.1| probable sugar ABC transporter, permease protein [Rhizobium etli
           IE4771]
          Length = 332

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/316 (9%), Positives = 91/316 (28%), Gaps = 23/316 (7%)

Query: 12  DKILCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCV 71
              + +  ++  L L +   +  + K + ++   +    + A G+++V+   G + L+  
Sbjct: 25  TFWVLIAVILACLFLSVATDSFATAKNLYNITRNVTFVAIIALGMTLVI-ITGGIDLSVG 83

Query: 72  IAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSE 131
               + +    +                 + +     ++          YL     +++ 
Sbjct: 84  SVLCLCSMVLAVTMHAGYG------IEIGIAAAIGTALLVGAFNGVMIAYLDFPPFVVTL 137

Query: 132 IFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMC 191
              ++      + +    ++     +     +     F    +  +   I        + 
Sbjct: 138 GMLSVARSLAMVASNNTVVFQFGPDHDKLLALGGGAWFLGIANPVLYMVILALLTGFVL- 196

Query: 192 FLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAA 251
                     R T        I  N+ A       +   K++ + +S+   G+AG     
Sbjct: 197 ----------RWTRFGRYVFAIGGNEHAATLTGVPVRSIKVAVYMISALSAGIAGIVQTG 246

Query: 252 SRDRISPDMFKFSENIIVISIVI-----LGGMTSLSKIAKATAILIGVVELCCGMNFYYF 306
               ++ ++    E  ++ + VI      GG+ +        A++  +      +    F
Sbjct: 247 WLGAVTTNIGAGMELQVIAAAVIGGANLAGGIGTAFGALVGAALIEVIRNSLGLLGINAF 306

Query: 307 NSLLKFDCSFNMRHTT 322
                   +  +    
Sbjct: 307 WQGTFIGGAIVLAVLF 322


>gi|42782070|ref|NP_979317.1| ribose ABC transporter, permease protein, putative [Bacillus cereus
           ATCC 10987]
 gi|42737994|gb|AAS41925.1| ribose ABC transporter, permease protein, putative [Bacillus cereus
           ATCC 10987]
          Length = 317

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 94/313 (30%), Gaps = 27/313 (8%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
           + LL ++Y  ++ +   +      +  +    +I V+ A G S V+     + ++   + 
Sbjct: 12  IILLLLMYIAIIGIINPSFIQFNSLSLLIKSSVILVVLAIGQSFVL-FTKNIDVSVGSSM 70

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
            + A    +L +             ++++      +             +  +IM+    
Sbjct: 71  GLSAAVCGMLLTDGYH------ASLSILAAILLGAILGFINGIGVAKFRVPAIIMTLGML 124

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
            ++     I  G   I                     F     I  + +  ++  +  + 
Sbjct: 125 GVIRGAMLIFTGGKWIEDIP---------------NDFKQLSSIITLGLPIIVWIVLIIL 169

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             +  +LR+      +  + DN+     +   +   K+ AF +S     +AG  F  +  
Sbjct: 170 LLLYFFLRKVPYGRYFYAVGDNEDGARLIGIPVNKVKIYAFIISGISAALAGCIFVMNIG 229

Query: 255 RISPDMFKFSENIIVISIVIL-----GGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
            +        E  ++ + V+      GG  S+   A     L  +      +    F + 
Sbjct: 230 FVPNQTGTGIELQVIAAAVLGGVHLKGGTGSIVGAALGAIFLEAISSSLVFLKIPAFWNN 289

Query: 310 LKFDCSFNMRHTT 322
                   +    
Sbjct: 290 AISGFLLLLIVIL 302


>gi|330822011|ref|YP_004350873.1| inner-membrane translocator [Burkholderia gladioli BSR3]
 gi|327374006|gb|AEA65361.1| inner-membrane translocator [Burkholderia gladioli BSR3]
          Length = 286

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 104/304 (34%), Gaps = 27/304 (8%)

Query: 39  IDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPV 98
           I +     ++Y + A GLSIV G L  ++      Y +GAY       ++  + W+ + +
Sbjct: 8   IVNGIGVGMLYFLLAVGLSIVFGLLRFVNFAHGAFYLLGAYFCY-QALQWEANFWVALLL 66

Query: 99  SAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYF 158
             +  GA   ++    L+          ++++     +L +   +  G  G  VA     
Sbjct: 67  VPLAVGAFAWLVEKLVLRHVYAQAHEFHILVTVGLALVLQECAILVWGPLGDNVAVPASL 126

Query: 159 LGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQK 218
            G  +              +Y  +  +V+     L+A +   L  T + +  R   +  +
Sbjct: 127 DGVVI----------WGSFVYPKYRLFVIGFTAVLAALLWWLLEGTRLGSTVRAGSEAAE 176

Query: 219 AFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGM 278
               L   +       FA+ +A   +AG   A  R        +      V+ +V    M
Sbjct: 177 MVSLLGINVSRVFSLVFALGAATAALAGVLAAPIRGVDPFMGIEALGVAFVVVVVGG--M 234

Query: 279 TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRSHS 338
            +         ++  V  +   +              +      ++ +A+  V+L+R + 
Sbjct: 235 GNFLGALVGGLLVGIVQSVMSTL--------------WPEGARLMIYVAMAAVLLLRPNG 280

Query: 339 LLRL 342
           LL  
Sbjct: 281 LLGR 284


>gi|296534511|ref|ZP_06896932.1| ABC superfamily ATP binding cassette transporter permease protein
           [Roseomonas cervicalis ATCC 49957]
 gi|296265162|gb|EFH11366.1| ABC superfamily ATP binding cassette transporter permease protein
           [Roseomonas cervicalis ATCC 49957]
          Length = 313

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 97/245 (39%), Gaps = 13/245 (5%)

Query: 63  LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYL 122
            G +S    +  A  AY+   L +    ++ L +P++A+ +   G+++GL   ++R  + 
Sbjct: 50  AGQVSFGHALYLAFAAYAVAFLSTLVPEALVL-LPIAAIGAALLGLVVGLFVSRYREIFF 108

Query: 123 AIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIF 182
            +  L +S +F ++L K+  +T+G  GI +              +RF     +       
Sbjct: 109 GMLNLALSMVFYSVLEKFYSLTHGTDGIRLPP------------LRFAGQSLTPEAQGWV 156

Query: 183 MYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFI 242
           +  + L +     +++     + +  A   I+  +     +  +     LSA+ +++   
Sbjct: 157 VLVLALVLSLGFGALVRVYLASPMGQALSGIKTREARLEFMGVSARRVLLSAYVLAALMA 216

Query: 243 GMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMN 302
           G  GA  A +   ++P +  ++ +  ++ I ILGG  S+                   + 
Sbjct: 217 GCGGAVIAMTSRHVTPALAYWTASGELVFIAILGGAGSVFGPFLGAVAYELTRVYAAALV 276

Query: 303 FYYFN 307
              + 
Sbjct: 277 ADAWQ 281


>gi|305680039|ref|ZP_07402849.1| putative ribose transport system permease protein RbsC
           [Corynebacterium matruchotii ATCC 14266]
 gi|305660659|gb|EFM50156.1| putative ribose transport system permease protein RbsC
           [Corynebacterium matruchotii ATCC 14266]
          Length = 327

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/311 (15%), Positives = 94/311 (30%), Gaps = 30/311 (9%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             +  ++  + LF+      +   + ++GIQ     + A+G++ V+ S G + L      
Sbjct: 29  ALVGLIIICVGLFIATPHFLTTTNLINVGIQTATVAILAFGMTFVIVSAG-IDLAVGSVA 87

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A  A    +  ++ GL  WL+I V  ++    G I GL     R                
Sbjct: 88  ACSAMVSAVCFAKLGLPDWLMIIVGLLVGLLAGAISGLAIAYGRLTAFI----------- 136

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
                          +    R   L  +  + +      +        +   ++ M    
Sbjct: 137 -----------ATLAMMSIARGVTLVISKGNPMSAPPSVTMLGKNYFGIPMPIVMMALSG 185

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
                 L RT I      I  N++A       +   ++  + +S  F G+AG        
Sbjct: 186 VICWFILSRTVIGRNMYAIGGNEEAARLSGIPVKSIQVIVYCLSGLFAGLAGLVIMGRLS 245

Query: 255 RISPDMFKFSENIIVISIVILGGMTSLS------KIAKATAILIGVVELCCGMNFYYFNS 308
              P        +  I+ V++GG +                +L  +      +N   F  
Sbjct: 246 SAQPQAA-LGYELDAIAAVVIGGASLAGGSGKASGTLVGAILLAVIRNGLNILNVPSFWQ 304

Query: 309 LLKFDCSFNMR 319
            +       + 
Sbjct: 305 QIVIGIVIALA 315


>gi|148272158|ref|YP_001221719.1| putative sugar ABC transporter permease [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
 gi|147830088|emb|CAN01017.1| putative sugar ABC transporter, permease component [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 458

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/339 (10%), Positives = 88/339 (25%), Gaps = 9/339 (2%)

Query: 3   IFSLRLNKYDKILCLLAVVYPLLLFLFLGATKSQKYIDSM--GIQILIYV--MFAWGLSI 58
            FS  L+         +  Y  L    +   +   + + +    + L +   + A GL +
Sbjct: 106 FFSRPLDTLRAGWDAASGAYSALFQGSIYNFRRPGFANGIKPLTETLTFATPLIAAGLGV 165

Query: 59  VVGS-LGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKF 117
            +   +GL ++       I A     +G  + L   + + ++       G + G      
Sbjct: 166 ALAFRVGLFNIGARGQMLIAAACAGWVGFGFDLPPVIHLVLAVAAGIVGGAVWGGIVGLL 225

Query: 118 RGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFV 177
           +    A   ++   +          +      +            +     F        
Sbjct: 226 KARTGAHEVIVTIMLNYVAFYLLSYLLRTPGLLQAPGSNNPKTPAMAENAIFPALLGDGY 285

Query: 178 IYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAV 237
                   V++    +   +     R+ +   +R + +N  A       +  + L A  +
Sbjct: 286 SLHAGFLVVVVATVIVWYLL----NRSGLGFRFRAVGENPSAARVAGIDVKNSYLYAMLI 341

Query: 238 SSAFIGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
           S    G+AGA                +        V L G +    +  A  +       
Sbjct: 342 SGGLAGLAGASQVLGTVTTGFSSGIDAGIGFDAITVALLGRSRPWGVFVAGILFGAFKAG 401

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336
              M       +       ++    +    L   +    
Sbjct: 402 GFSMQAAEGVPIDIVVVVQSLIVLFIAAPPLVRAVFRLP 440


>gi|47458873|ref|YP_015735.1| unspecified sugar ABC transport permease protein [Mycoplasma mobile
           163K]
 gi|47458201|gb|AAT27524.1| unspecified sugar ABC transport permease protein [Mycoplasma mobile
           163K]
          Length = 531

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/334 (11%), Positives = 96/334 (28%), Gaps = 24/334 (7%)

Query: 11  YDKILCLLAVV-------YPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSL 63
           +  ++  L ++       +  +  +FL    S   + +  + + ++   A G+       
Sbjct: 43  FLGLILALVIISFNGTNPFEFISVVFLTTFGSSGSLFATILLVYVFASLAVGIGF---KA 99

Query: 64  GLLSLNCVIAYAIG---AYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGD 120
           GL ++        G   A+ Y+I+ +    +  L +    +       I+G  S+     
Sbjct: 100 GLFNIGVSGQMMFGGLLAFFYLIIVANSDANGNLFVDGGQIFLAIIISILGGISISLIAG 159

Query: 121 YLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYE 180
            L  A L ++E+   +L+ W            +       T     ++   F        
Sbjct: 160 AL-KAFLKVNEVVSTLLLNWVVFYFASWATSGSSFKSISATNSLKTVQVDSFFYEAGWIV 218

Query: 181 IFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSA 240
           + +  +L+        +    ++T      + +  N  A      +     +  FA+S A
Sbjct: 219 LAIIMILIISIGFYFIL----KKTTFGYKIKAVGFNPDASEYAGISKKTLTMVIFAISGA 274

Query: 241 F---IGMAGAFFAASRDRISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVEL 297
                G    F     + ++  +         I+I +L    S   I  +      +   
Sbjct: 275 LAGFAGFFFYFIFQRGNYVTESVGPLLVGFDSIAISLLA-YNSPIGIIASAFFYSILTNG 333

Query: 298 CCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLV 331
              +             +  +             
Sbjct: 334 NAALLQEVGLRPEANQIAVGV--IIYFTAIAIAF 365


>gi|291288011|ref|YP_003504827.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809]
 gi|290885171|gb|ADD68871.1| inner-membrane translocator [Denitrovibrio acetiphilus DSM 12809]
          Length = 334

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 91/318 (28%), Gaps = 12/318 (3%)

Query: 15  LCLLAVVYPLLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAY 74
             ++  V  +   L   +      + S+ + + IY + A G++  +   G L L+     
Sbjct: 21  FLIVMAVLFVAFGLVEPSFWQWSNLFSILLGVTIYGILALGVTFTLVIDG-LDLSVGSNA 79

Query: 75  AIGAYSYVILGSRYGLSIWLLIPVSAMISGACGMIMGLPSLKFRGDYLAIATLIMSEIFQ 134
           A+             LS +    +  MI  A G + G   +K +   L     +M  +  
Sbjct: 80  AMSVMMASYSMVVLNLSGFAAFVICIMIGAAIGFLNGFLIVKVKVPDLLATLGMMFLVQG 139

Query: 135 NILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFMYYVLLGMCFLS 194
             LI     + G   I           +   L          +   +    VL       
Sbjct: 140 LQLIPSGGRSIGTGMILPNGDEAEGMFSDAFLYLGQGRLFDLIPIPVIFMLVLA------ 193

Query: 195 ASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRD 254
             + + L  T     +  I  N +A   +   +   ++ A+ +S +   + G   AA   
Sbjct: 194 FVVYIILNHTRWGRVFYAIGGNAEAARLVGANVNLYRMLAYIISGSISALGGILLAARVG 253

Query: 255 RISPDMFKFSENIIVIS-----IVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSL 309
           R             V +      V+     +          +  ++     ++  Y+   
Sbjct: 254 RGDVSSGGGLLLDAVGAALIGYAVLGAKKPNPFGTIVGAIFVGMLLNGLTMLSMPYYIQD 313

Query: 310 LKFDCSFNMRHTTLMVIA 327
               C           +A
Sbjct: 314 FIKGCVLVAALAFTFGLA 331


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.316    0.117    0.283 

Lambda     K      H
   0.267   0.0360    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,154,274,059
Number of Sequences: 14124377
Number of extensions: 77811221
Number of successful extensions: 2909923
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 19239
Number of HSP's successfully gapped in prelim test: 113099
Number of HSP's that attempted gapping in prelim test: 2603674
Number of HSP's gapped (non-prelim): 325019
length of query: 351
length of database: 4,842,793,630
effective HSP length: 140
effective length of query: 211
effective length of database: 2,865,380,850
effective search space: 604595359350
effective search space used: 604595359350
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (20.9 bits)
S2: 81 (36.0 bits)